ENSMUSG00000060244	Alyref2	ENSMUST00000081527	ENSMUSP00000080242	TRANSLATION	protein_coding	-	CCDS15497.1	-	218	0	1	0.5	107.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061024	Rrs1	ENSMUST00000072079	ENSMUSP00000071955	TRANSLATION	protein_coding	-	CCDS14811.1	-	365	0	0.32	7.5	196.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038633	Degs1	ENSMUST00000133052	ENSMUSP00000119473	TRANSLATION	protein_coding	stop	-	2	229	0	0	0	66.7	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000038633	Degs1	ENSMUST00000035295	ENSMUSP00000048519	TRANSLATION	protein_coding	-	CCDS15587.1	1	323	0	0	14.5	155.5	5	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000038633	Degs1	ENSMUST00000132551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026418	Tnni1	ENSMUST00000154463	ENSMUSP00000122925	TRANSLATION	protein_coding	-	CCDS48374.1	5	187	0	4.33	11.3	161.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026418	Tnni1	ENSMUST00000187830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026418	Tnni1	ENSMUST00000137331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026418	Tnni1	ENSMUST00000152208	ENSMUSP00000121966	TRANSLATION	protein_coding	-	CCDS48374.1	5	187	0	4.33	11.3	161.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026418	Tnni1	ENSMUST00000132795	ENSMUSP00000121122	TRANSLATION	protein_coding	stop	-	5	60	0	0.33	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026418	Tnni1	ENSMUST00000139986	ENSMUSP00000123049	TRANSLATION	protein_coding	-	-	5	171	0	4	1	159.4	0	-4,-5	-	-	11.238	MINOR
ENSMUSG00000026418	Tnni1	ENSMUST00000148201	ENSMUSP00000123509	TRANSLATION	protein_coding	-	CCDS48374.1	5	187	0	4.33	11.3	161.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026418	Tnni1	ENSMUST00000129217	ENSMUSP00000119848	TRANSLATION	protein_coding	start	-	2	181	0	4.33	0	161.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026418	Tnni1	ENSMUST00000152075	ENSMUSP00000121343	TRANSLATION	protein_coding	-	CCDS48374.1	5	187	0	4.33	11.3	161.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025967	Eef1b2	ENSMUST00000126469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025967	Eef1b2	ENSMUST00000135877	ENSMUSP00000137671	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	0.33	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000025967	Eef1b2	ENSMUST00000142062	ENSMUSP00000137881	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025967	Eef1b2	ENSMUST00000126795	ENSMUSP00000134341	TRANSLATION	nonsense_mediated_decay	start	-	5	94	0	1.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025967	Eef1b2	ENSMUST00000129339	ENSMUSP00000116492	TRANSLATION	protein_coding	-	CCDS14997.1	1	225	0	5.74	19.5	176.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025967	Eef1b2	ENSMUST00000188524	ENSMUSP00000140895	TRANSLATION	protein_coding	-	-	3	184	0	4.66	0	176.4	0	-4,-5	-	-	9.84	MINOR
ENSMUSG00000025967	Eef1b2	ENSMUST00000148553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025967	Eef1b2	ENSMUST00000027108	ENSMUSP00000137835	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	0.896	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025967	Eef1b2	ENSMUST00000174890	ENSMUSP00000133545	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	1.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053161	Daw1	ENSMUST00000065403	ENSMUSP00000067583	TRANSLATION	protein_coding	-	-	5	415	0	11.54	8.3	234.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000053161	Daw1	ENSMUST00000065436	ENSMUSP00000067102	TRANSLATION	protein_coding	-	CCDS15103.1	1	310	0	8.54	0.5	138.1	0	-4,-5	-	-	0.228	MINOR
ENSMUSG00000053161	Daw1	ENSMUST00000149342	ENSMUSP00000117796	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053161	Daw1	ENSMUST00000113436	ENSMUSP00000109063	TRANSLATION	protein_coding	-	-	1	356	0	8.674	0	119.8	0	-4,-5	-	-	0.27	MINOR
ENSMUSG00000053161	Daw1	ENSMUST00000133079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013698	Pea15a	ENSMUST00000125361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013698	Pea15a	ENSMUST00000013842	ENSMUSP00000013842	TRANSLATION	protein_coding	-	CCDS15510.1	1	130	0	4	14.8	72	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000013698	Pea15a	ENSMUST00000152432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013698	Pea15a	ENSMUST00000111247	ENSMUSP00000106878	TRANSLATION	protein_coding	-	-	3	108	0	3.25	1.2	0	0	-4,-5	-	-	4.556	MINOR
ENSMUSG00000013698	Pea15a	ENSMUST00000155109	ENSMUSP00000117735	TRANSLATION	protein_coding	stop	-	3	92	0	2.75	0	72	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038855	Itpkb	ENSMUST00000070181	ENSMUSP00000069851	TRANSLATION	protein_coding	-	CCDS35808.1	1	942	23	5.75	0.5	143	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038855	Itpkb	ENSMUST00000195043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042708	Shcbp1l	ENSMUST00000137861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042708	Shcbp1l	ENSMUST00000042373	ENSMUSP00000036347	TRANSLATION	protein_coding	-	CCDS15372.1	1	639	0	0	1.5	46.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042708	Shcbp1l	ENSMUST00000136614	ENSMUSP00000137625	TRANSLATION	nonsense_mediated_decay	-	-	1	424	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094638	Gm21972	ENSMUST00000135197	ENSMUSP00000136581	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	98	0	2	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000058076	Sdhc	ENSMUST00000155798	ENSMUSP00000122062	TRANSLATION	protein_coding	stop	-	5	32	0	1.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058076	Sdhc	ENSMUST00000111336	ENSMUSP00000106968	TRANSLATION	protein_coding	-	CCDS35772.1	1	169	16	4.57	8.3	87.8	3	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000058076	Sdhc	ENSMUST00000081560	ENSMUSP00000080273	TRANSLATION	protein_coding	-	-	3	135	16	3.49	1.2	66.5	3	-4,0	-	-	14.463	MINOR
ENSMUSG00000041945	Mfsd9	ENSMUST00000144385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041945	Mfsd9	ENSMUST00000039672	ENSMUSP00000035727	TRANSLATION	protein_coding	-	CCDS14915.1	1	466	0	1.96	1.5	141.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041945	Mfsd9	ENSMUST00000131390	ENSMUSP00000137884	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000165235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000164353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000172068	ENSMUSP00000126166	TRANSLATION	protein_coding	stop	-	5	244	0	0	0	109	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000168905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000168016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000170139	ENSMUSP00000127598	TRANSLATION	protein_coding	-	CCDS48267.1	5	557	0	0	7.5	425.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000038305	Spats2l	ENSMUST00000167085	ENSMUSP00000133054	TRANSLATION	protein_coding	-	CCDS35573.2	1	578	0	0	1.5	425.9	0	-4,-7	-	-	6.231	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000172287	ENSMUSP00000131125	TRANSLATION	protein_coding	stop	-	5	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000168895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000163922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038305	Spats2l	ENSMUST00000163239	ENSMUSP00000128992	TRANSLATION	protein_coding	-	-	5	450	0	0	0	374.4	0	-4,-5	-	-	2.91	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000167971	ENSMUSP00000128764	TRANSLATION	protein_coding	stop	-	2	130	0	0	0	37.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000171699	ENSMUSP00000128239	TRANSLATION	protein_coding	stop	-	5	270	0	0	0	258.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000164302	ENSMUSP00000132592	TRANSLATION	protein_coding	-	-	5	488	0	0	6.5	370	0	-4,-5	-	-	5.184	MINOR
ENSMUSG00000038305	Spats2l	ENSMUST00000169772	ENSMUSP00000132975	TRANSLATION	protein_coding	-	CCDS48267.1	1	557	0	0	7.5	425.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000102030	Gm29106	ENSMUST00000186264	ENSMUSP00000141137	TRANSLATION	protein_coding	-	-	5	697	87	1.4	0	610.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061616	Olfr12	ENSMUST00000213247	ENSMUSP00000150858	TRANSLATION	protein_coding	-	CCDS15174.1	5	333	0	0.2	1.5	175.3	6	-2,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061616	Olfr12	ENSMUST00000081274	ENSMUSP00000080027	TRANSLATION	protein_coding	-	CCDS15174.1	-	333	0	0.2	1.5	175.3	6	-2,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056708	Ier5	ENSMUST00000055322	ENSMUSP00000056948	TRANSLATION	protein_coding	-	CCDS15382.1	-	308	0	0	1.5	251.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000092083	Kcnb2	ENSMUST00000170146	ENSMUSP00000126656	TRANSLATION	protein_coding	-	CCDS48222.1	1	907	0	1.08	1.5	763.1	3	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000092083	Kcnb2	ENSMUST00000175681	ENSMUSP00000135382	TRANSLATION	protein_coding	-	CCDS48222.1	5	907	0	1.08	1.5	763.1	3	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000015222	Map2	ENSMUST00000077355	ENSMUSP00000076577	TRANSLATION	protein_coding	-	CCDS35602.1	1	467	0	2.0684	8.8	181.8	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000137807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015222	Map2	ENSMUST00000024639	ENSMUSP00000024639	TRANSLATION	protein_coding	-	CCDS35602.1	5	467	0	2.0684	8.8	181.8	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000133522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015222	Map2	ENSMUST00000173800	ENSMUSP00000134518	TRANSLATION	protein_coding	start/stop	-	5	240	0	1.41	0	137.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000156636	ENSMUSP00000133871	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000114018	ENSMUSP00000109651	TRANSLATION	protein_coding	-	CCDS15020.1	5	498	0	3.0684	8.8	242.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000114012	ENSMUSP00000109645	TRANSLATION	protein_coding	-	-	1	466	0	2.0684	2.7	181.8	0	-4,-5	-	-	4.656	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000174590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015222	Map2	ENSMUST00000239213	ENSMUSP00000159224	TRANSLATION	protein_coding	-	-	-	1989	0	2.0684	0	2378.3	0	-4,-5	-	-	10.002	ALTERNATIVE:2
ENSMUSG00000015222	Map2	ENSMUST00000123647	ENSMUSP00000119341	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	21.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000173778	ENSMUSP00000134651	TRANSLATION	protein_coding	start/stop	-	5	381	0	2.41	0	446	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000127388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015222	Map2	ENSMUST00000125844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015222	Map2	ENSMUST00000172886	ENSMUSP00000133446	TRANSLATION	protein_coding	start/stop	-	5	336	0	2.41	0	341.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000173855	ENSMUSP00000134471	TRANSLATION	protein_coding	stop	-	5	565	0	0	0	125.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000151423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015222	Map2	ENSMUST00000128673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015222	Map2	ENSMUST00000172486	ENSMUSP00000134187	TRANSLATION	protein_coding	start	-	5	131	0	1.3184	0	53.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000114013	ENSMUSP00000109646	TRANSLATION	protein_coding	-	CCDS83550.1	1	1828	0	2.0684	1.5	2378.3	0	-4,-5	-	-	10.194	PRINCIPAL:2
ENSMUSG00000015222	Map2	ENSMUST00000141148	ENSMUSP00000117996	TRANSLATION	protein_coding	start/stop	-	1	262	0	0	0	21.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000114015	ENSMUSP00000109648	TRANSLATION	protein_coding	-	CCDS35602.1	1	467	0	2.0684	8.8	181.8	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000124873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015222	Map2	ENSMUST00000114017	ENSMUSP00000109650	TRANSLATION	protein_coding	-	CCDS15020.1	1	498	0	3.0684	8.8	242.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000015222	Map2	ENSMUST00000145419	ENSMUSP00000134538	TRANSLATION	protein_coding	stop	-	1	608	0	0	0	690.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026127	Imp4	ENSMUST00000134327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026127	Imp4	ENSMUST00000128086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026127	Imp4	ENSMUST00000027303	ENSMUSP00000027303	TRANSLATION	protein_coding	-	CCDS35536.1	1	291	2	6.27	6	104.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000026127	Imp4	ENSMUST00000187077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026127	Imp4	ENSMUST00000149962	ENSMUSP00000141982	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	1.09	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026127	Imp4	ENSMUST00000191000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026127	Imp4	ENSMUST00000136770	ENSMUSP00000120823	TRANSLATION	nonsense_mediated_decay	start	-	5	171	2	3.09	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026127	Imp4	ENSMUST00000137794	ENSMUSP00000121452	TRANSLATION	nonsense_mediated_decay	-	-	2	97	0	1.09	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000101904	Gm29427	ENSMUST00000188520	ENSMUSP00000140786	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	374	16	8.8	0	347	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000004872	Pax3	ENSMUST00000087086	ENSMUSP00000084320	TRANSLATION	protein_coding	-	CCDS15082.1	1	479	0	4	3.9	418.5	0	-4,-2	-	-	12.908	MINOR
ENSMUSG00000004872	Pax3	ENSMUST00000172555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004872	Pax3	ENSMUST00000004994	ENSMUSP00000004994	TRANSLATION	protein_coding	-	CCDS48294.1	1	484	0	4	13.8	418.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000079550	Mpp4	ENSMUST00000187825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079550	Mpp4	ENSMUST00000191200	ENSMUSP00000140957	TRANSLATION	protein_coding	-	-	1	629	23	9.1444	0	253.1	0	-4,-5	-	-	16.752	MINOR
ENSMUSG00000079550	Mpp4	ENSMUST00000186790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079550	Mpp4	ENSMUST00000189884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079550	Mpp4	ENSMUST00000186477	ENSMUSP00000140352	TRANSLATION	protein_coding	-	-	5	591	23	8.935	0	253.1	0	-4,-5	-	-	16.332	MINOR
ENSMUSG00000079550	Mpp4	ENSMUST00000189743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079550	Mpp4	ENSMUST00000114275	ENSMUSP00000109914	TRANSLATION	protein_coding	-	CCDS48272.1	2	654	23	9.7694	0.5	253.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000079550	Mpp4	ENSMUST00000078874	ENSMUSP00000077914	TRANSLATION	protein_coding	-	CCDS48271.1	1	635	23	9.7694	1.5	253.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000079550	Mpp4	ENSMUST00000066374	ENSMUSP00000070711	TRANSLATION	protein_coding	-	-	5	635	23	9.71	1.5	253.1	0	-4,-5	-	-	17.88	ALTERNATIVE:2
ENSMUSG00000079550	Mpp4	ENSMUST00000188494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039630	Hnrnpu	ENSMUST00000189450	ENSMUSP00000139751	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039630	Hnrnpu	ENSMUST00000146362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039630	Hnrnpu	ENSMUST00000134291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039630	Hnrnpu	ENSMUST00000162916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039630	Hnrnpu	ENSMUST00000037748	ENSMUSP00000047571	TRANSLATION	protein_coding	-	CCDS35804.1	1	800	9	2.14	1.5	192.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039630	Hnrnpu	ENSMUST00000159117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039630	Hnrnpu	ENSMUST00000188044	ENSMUSP00000139959	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039630	Hnrnpu	ENSMUST00000150825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039630	Hnrnpu	ENSMUST00000161769	ENSMUSP00000124147	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	793	9	2.14	0.5	192.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000188879	ENSMUSP00000140731	TRANSLATION	protein_coding	-	CCDS35666.1	1	328	0	3.598	1.5	93.8	0	-4,-5	-	-	12.04	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000188081	ENSMUSP00000140165	TRANSLATION	protein_coding	-	-	1	301	0	2.498	0	51.4	0	-4,-5	-	-	6.882	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000190484	ENSMUSP00000140281	TRANSLATION	protein_coding	stop	-	1	218	0	2.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000086843	ENSMUSP00000084054	TRANSLATION	protein_coding	-	CCDS35665.1	1	336	0	3.7	5.1	93.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026311	Asb1	ENSMUST00000027538	ENSMUSP00000027538	TRANSLATION	protein_coding	-	-	1	96	0	1.7	0	42.4	0	-4,-7	-	-	4.71	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000186068	ENSMUSP00000140225	TRANSLATION	protein_coding	stop	-	1	89	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026311	Asb1	ENSMUST00000185718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025916	Ppp1r42	ENSMUST00000130102	ENSMUSP00000115030	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	2	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025916	Ppp1r42	ENSMUST00000027049	ENSMUSP00000027049	TRANSLATION	protein_coding	-	CCDS14817.1	1	357	0	4.78	1.5	37.3	0	-4,-6	-	-	11.874	PRINCIPAL:1
ENSMUSG00000025916	Ppp1r42	ENSMUST00000155163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025916	Ppp1r42	ENSMUST00000176398	ENSMUSP00000135276	TRANSLATION	protein_coding	stop	-	5	87	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025916	Ppp1r42	ENSMUST00000124874	ENSMUSP00000115309	TRANSLATION	nonsense_mediated_decay	-	-	5	269	0	4.53	1.7	37.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025916	Ppp1r42	ENSMUST00000147000	ENSMUSP00000135564	TRANSLATION	protein_coding	start	-	2	82	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026469	Xpr1	ENSMUST00000139925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026469	Xpr1	ENSMUST00000143529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026469	Xpr1	ENSMUST00000129271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026469	Xpr1	ENSMUST00000111775	ENSMUSP00000107405	TRANSLATION	protein_coding	-	-	5	630	0	4.7	2.4	361.4	7	-4,-5	-	-	7.809	MINOR
ENSMUSG00000026469	Xpr1	ENSMUST00000027741	ENSMUSP00000027741	TRANSLATION	protein_coding	-	CCDS15384.1	1	695	0	4.7	7.5	442	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026469	Xpr1	ENSMUST00000111774	ENSMUSP00000107404	TRANSLATION	protein_coding	-	-	1	679	0	4.7	0	442	8	-4,-5	-	-	12	MINOR
ENSMUSG00000026469	Xpr1	ENSMUST00000192359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063659	Zbtb18	ENSMUST00000193480	ENSMUSP00000141663	TRANSLATION	protein_coding	-	-	1	236	0	2.498	0	99.4	0	-4,-5	-	-	6.348	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000194319	ENSMUSP00000141901	TRANSLATION	protein_coding	stop	-	5	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000195549	ENSMUSP00000142073	TRANSLATION	protein_coding	stop	-	3	128	0	2.3	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000077225	ENSMUSP00000076463	TRANSLATION	protein_coding	-	CCDS15553.1	-	522	15	2.978	15.7	177.5	0	-4,-5	-	-	21.676	PRINCIPAL:3
ENSMUSG00000063659	Zbtb18	ENSMUST00000195002	ENSMUSP00000142124	TRANSLATION	protein_coding	stop	-	1	45	0	1.5	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000192851	ENSMUSP00000142256	TRANSLATION	protein_coding	stop	-	5	228	0	2.498	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000195388	ENSMUSP00000141694	TRANSLATION	protein_coding	stop	-	5	161	0	2.498	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000192699	ENSMUSP00000141673	TRANSLATION	protein_coding	stop	-	5	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000193440	ENSMUSP00000141337	TRANSLATION	protein_coding	stop	-	5	138	0	2.564	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063659	Zbtb18	ENSMUST00000194269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063659	Zbtb18	ENSMUST00000094276	ENSMUSP00000091831	TRANSLATION	protein_coding	-	CCDS35800.1	2	531	15	2.978	17	177.5	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000063659	Zbtb18	ENSMUST00000195612	ENSMUSP00000141724	TRANSLATION	protein_coding	-	CCDS15553.1	1	522	15	2.978	15.7	177.5	0	-4,-5	-	-	21.676	PRINCIPAL:3
ENSMUSG00000067851	Arfgef1	ENSMUST00000142497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000131556	ENSMUSP00000118805	TRANSLATION	protein_coding	-	-	5	1054	0	8.88	0	556.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000067851	Arfgef1	ENSMUST00000156563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000128834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000186813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000186720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000187417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067851	Arfgef1	ENSMUST00000088615	ENSMUSP00000085986	TRANSLATION	protein_coding	-	CCDS35512.1	5	1846	0	8.88	6.3	678.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000064294	Aox3	ENSMUST00000159014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064294	Aox3	ENSMUST00000162011	ENSMUSP00000140140	TRANSLATION	protein_coding	-	-	1	270	21	6.5	0	138.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000064294	Aox3	ENSMUST00000161549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064294	Aox3	ENSMUST00000040999	ENSMUSP00000049391	TRANSLATION	protein_coding	-	CCDS14969.1	1	1335	72	31.5	1.5	1088.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000064294	Aox3	ENSMUST00000160815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067653	Ankrd23	ENSMUST00000193991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067653	Ankrd23	ENSMUST00000193083	ENSMUSP00000141394	TRANSLATION	protein_coding	-	CCDS78564.1	1	192	0	5.39	0.5	100.4	0	-4,-5	-	-	10.8	MINOR
ENSMUSG00000067653	Ankrd23	ENSMUST00000054665	ENSMUSP00000061168	TRANSLATION	protein_coding	-	CCDS14882.1	1	306	0	5.99	6.3	76.8	0	-4,-5	-	-	12.584	PRINCIPAL:1
ENSMUSG00000067653	Ankrd23	ENSMUST00000194853	ENSMUSP00000141541	TRANSLATION	protein_coding	-	-	1	273	0	4.99	0	56	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000060568	Fam78b	ENSMUST00000190081	ENSMUSP00000139628	TRANSLATION	protein_coding	-	CCDS35764.1	1	261	0	0	18.5	0	0	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000060568	Fam78b	ENSMUST00000122929	ENSMUSP00000115826	TRANSLATION	nonsense_mediated_decay	start	-	1	257	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060568	Fam78b	ENSMUST00000126198	ENSMUSP00000122636	TRANSLATION	protein_coding	-	CCDS35764.1	1	261	0	0	18.5	0	0	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000060568	Fam78b	ENSMUST00000165874	ENSMUSP00000131620	TRANSLATION	protein_coding	-	CCDS35764.1	1	261	0	0	18.5	0	0	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000060568	Fam78b	ENSMUST00000128373	ENSMUSP00000117516	TRANSLATION	nonsense_mediated_decay	start	-	1	254	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060568	Fam78b	ENSMUST00000156025	ENSMUSP00000117572	TRANSLATION	nonsense_mediated_decay	-	-	1	261	0	0	18.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026463	Atp2b4	ENSMUST00000165602	ENSMUSP00000133187	TRANSLATION	protein_coding	-	CCDS15298.1	1	1205	7	7.94	0.5	517.7	4	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026463	Atp2b4	ENSMUST00000143567	ENSMUSP00000119242	TRANSLATION	protein_coding	-	CCDS15298.1	5	1205	7	7.94	0.5	517.7	4	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026463	Atp2b4	ENSMUST00000167348	ENSMUSP00000126957	TRANSLATION	protein_coding	start	-	-	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026463	Atp2b4	ENSMUST00000140810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026463	Atp2b4	ENSMUST00000112264	ENSMUSP00000107883	TRANSLATION	protein_coding	-	-	1	1107	7	7.94	0	469.5	4	-4,-5	-	-	15.108	MINOR
ENSMUSG00000026463	Atp2b4	ENSMUST00000125659	ENSMUSP00000116941	TRANSLATION	protein_coding	-	-	1	1172	7	7.94	0.5	498.1	4	-4,-5	-	-	16.824	MINOR
ENSMUSG00000026463	Atp2b4	ENSMUST00000048953	ENSMUSP00000047978	TRANSLATION	protein_coding	-	CCDS48365.1	1	1166	7	7.94	0.5	498.1	4	-4,-5	-	-	16.824	MINOR
ENSMUSG00000026463	Atp2b4	ENSMUST00000128692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037568	Vash2	ENSMUST00000047409	ENSMUSP00000036768	TRANSLATION	protein_coding	-	CCDS48482.1	1	355	0	0	8.3	403.1	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000037568	Vash2	ENSMUST00000192306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037568	Vash2	ENSMUST00000166139	ENSMUSP00000127626	TRANSLATION	protein_coding	-	CCDS48482.1	1	355	0	0	8.3	403.1	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026715	Serpinc1	ENSMUST00000195760	ENSMUSP00000141864	TRANSLATION	protein_coding	stop	-	3	107	0	2	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000026715	Serpinc1	ENSMUST00000193477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026715	Serpinc1	ENSMUST00000191936	ENSMUSP00000142122	TRANSLATION	protein_coding	-	-	3	92	0	1.5	0	52.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026715	Serpinc1	ENSMUST00000194777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026715	Serpinc1	ENSMUST00000194455	ENSMUSP00000141885	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026715	Serpinc1	ENSMUST00000194592	ENSMUSP00000141556	TRANSLATION	protein_coding	stop	-	5	286	0	6.5	0	213.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000026715	Serpinc1	ENSMUST00000064725	ENSMUSP00000068971	TRANSLATION	protein_coding	-	CCDS15411.1	1	465	0	9.25	7.5	404	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000026715	Serpinc1	ENSMUST00000195438	ENSMUSP00000141834	TRANSLATION	nonsense_mediated_decay	-	-	5	103	0	1.5	0	53.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026637	Traf5	ENSMUST00000085573	ENSMUSP00000082710	TRANSLATION	protein_coding	-	-	5	552	25	4.325	0	93.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026637	Traf5	ENSMUST00000195815	ENSMUSP00000141931	TRANSLATION	protein_coding	start/stop	-	5	138	13	1.325	0	67.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026637	Traf5	ENSMUST00000193355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026637	Traf5	ENSMUST00000192628	ENSMUSP00000141584	TRANSLATION	protein_coding	start	-	2	250	0	1.16	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026637	Traf5	ENSMUST00000194408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051251	Nhlh1	ENSMUST00000059794	ENSMUSP00000057489	TRANSLATION	protein_coding	-	CCDS15506.1	1	133	0	0.6	6.4	65.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000104158	Gm38100	ENSMUST00000194391	ENSMUSP00000144267	TRANSLATION	protein_coding	-	-	-	442	0	0.6	0	311.9	0	-4,-6	-	-	11.406	ALTERNATIVE:2
ENSMUSG00000104158	Gm38100	ENSMUST00000201297	ENSMUSP00000143887	TRANSLATION	protein_coding	-	CCDS78757.1	1	447	0	0.666	0.5	311.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000032666	1700025G04Rik	ENSMUST00000044581	ENSMUSP00000036406	TRANSLATION	protein_coding	-	CCDS35737.1	1	121	0	0	14.8	150.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032666	1700025G04Rik	ENSMUST00000187603	ENSMUSP00000140950	TRANSLATION	nonsense_mediated_decay	-	-	1	121	0	0	14.8	150.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032666	1700025G04Rik	ENSMUST00000128433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032666	1700025G04Rik	ENSMUST00000121533	ENSMUSP00000113971	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	0	0	74.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026582	Sele	ENSMUST00000027874	ENSMUSP00000027874	TRANSLATION	protein_coding	-	CCDS15432.1	1	619	9	6.72	1.5	310.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026536	Ifi211	ENSMUST00000009340	ENSMUSP00000009340	TRANSLATION	protein_coding	-	CCDS15532.1	1	425	0	3.4	0.5	280.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026527	Rgs7	ENSMUST00000193798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026527	Rgs7	ENSMUST00000027812	ENSMUSP00000027812	TRANSLATION	protein_coding	-	CCDS15546.1	5	469	0	9.28	10.6	238.9	0	-4,-5	-	-	15.256	PRINCIPAL:3
ENSMUSG00000026527	Rgs7	ENSMUST00000195477	ENSMUSP00000142181	TRANSLATION	protein_coding	start	-	1	191	0	4.68	0	123.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026527	Rgs7	ENSMUST00000192227	ENSMUSP00000142278	TRANSLATION	protein_coding	-	CCDS15546.1	1	469	0	9.28	10.6	238.9	0	-4,-5	-	-	15.256	PRINCIPAL:3
ENSMUSG00000026527	Rgs7	ENSMUST00000192203	ENSMUSP00000141284	TRANSLATION	protein_coding	start	-	1	71	0	2.33	0	34.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026527	Rgs7	ENSMUST00000194288	ENSMUSP00000141855	TRANSLATION	protein_coding	start	-	5	178	0	4.13	0	123.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026527	Rgs7	ENSMUST00000195324	ENSMUSP00000141380	TRANSLATION	protein_coding	-	CCDS83644.1	5	477	0	9.08	12.8	238.9	0	-4,-5	-	-	15.598	ALTERNATIVE:1
ENSMUSG00000026527	Rgs7	ENSMUST00000194555	ENSMUSP00000142180	TRANSLATION	protein_coding	-	CCDS78755.1	1	470	0	8.88	0.5	238.9	0	-4,-5	-	-	11.202	MINOR
ENSMUSG00000051703	Tmem198	ENSMUST00000113575	ENSMUSP00000109205	TRANSLATION	protein_coding	-	CCDS15076.1	1	360	0	0	8.8	160.4	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051703	Tmem198	ENSMUST00000187411	ENSMUSP00000140795	TRANSLATION	protein_coding	start/stop	-	2	142	0	0	0	30.5	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000051703	Tmem198	ENSMUST00000148980	ENSMUSP00000116977	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000051703	Tmem198	ENSMUST00000050899	ENSMUSP00000057865	TRANSLATION	protein_coding	-	CCDS15076.1	1	360	0	0	8.8	160.4	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000025935	Tram1	ENSMUST00000188377	ENSMUSP00000140499	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025935	Tram1	ENSMUST00000185447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025935	Tram1	ENSMUST00000027068	ENSMUSP00000027068	TRANSLATION	protein_coding	-	CCDS14822.1	1	374	0	0	12.8	165.7	8	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000118272	Arhgef4	ENSMUST00000211073	ENSMUSP00000148067	TRANSLATION	protein_coding	-	-	-	56	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000073608	Gal3st2c	ENSMUST00000097632	ENSMUSP00000095234	TRANSLATION	protein_coding	-	CCDS48330.1	1	396	0	0	2.7	489.5	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042501	Cpa6	ENSMUST00000035577	ENSMUSP00000035435	TRANSLATION	protein_coding	-	CCDS14819.1	1	438	9	8.9	7.5	343.3	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000042501	Cpa6	ENSMUST00000140938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042501	Cpa6	ENSMUST00000153695	ENSMUSP00000118341	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	0.45	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000042501	Cpa6	ENSMUST00000147575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026003	Acadl	ENSMUST00000027153	ENSMUSP00000027153	TRANSLATION	protein_coding	-	CCDS15023.1	1	430	30	9.1	3.9	335.5	0	-2,1	-	-	19	PRINCIPAL:1
ENSMUSG00000026003	Acadl	ENSMUST00000139208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026247	Ecel1	ENSMUST00000160810	ENSMUSP00000125557	TRANSLATION	protein_coding	-	CCDS15128.1	1	775	7	12.13	5.1	606.3	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026247	Ecel1	ENSMUST00000027463	ENSMUSP00000027463	TRANSLATION	protein_coding	-	CCDS15128.1	1	775	7	12.13	5.1	606.3	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026247	Ecel1	ENSMUST00000161002	ENSMUSP00000125096	TRANSLATION	protein_coding	-	CCDS15128.1	1	775	7	12.13	5.1	606.3	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026247	Ecel1	ENSMUST00000159662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026247	Ecel1	ENSMUST00000162015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026245	Farsb	ENSMUST00000188247	ENSMUSP00000139933	TRANSLATION	protein_coding	stop	-	5	237	0	7.25	0	93.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026245	Farsb	ENSMUST00000189529	ENSMUSP00000140001	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	1.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026245	Farsb	ENSMUST00000191021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026245	Farsb	ENSMUST00000068333	ENSMUSP00000069508	TRANSLATION	protein_coding	-	CCDS15084.1	1	589	0	16.08	10.8	143.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026245	Farsb	ENSMUST00000170217	ENSMUSP00000129828	TRANSLATION	protein_coding	-	CCDS15084.1	1	589	0	16.08	10.8	143.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026245	Farsb	ENSMUST00000189931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026245	Farsb	ENSMUST00000190441	ENSMUSP00000140934	TRANSLATION	protein_coding	stop	-	3	206	0	4.83	0	25.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007122	Casq1	ENSMUST00000170638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007122	Casq1	ENSMUST00000170700	ENSMUSP00000129647	TRANSLATION	protein_coding	stop	-	5	156	5	2.75	0	131.7	0	1,-2	-	-	-1	MINOR
ENSMUSG00000007122	Casq1	ENSMUST00000003554	ENSMUSP00000003554	TRANSLATION	protein_coding	-	CCDS35781.2	1	405	9	9.25	1.5	779.3	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000038608	Dock10	ENSMUST00000191449	ENSMUSP00000140513	TRANSLATION	protein_coding	stop	-	1	373	13	2.64	0	169.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038608	Dock10	ENSMUST00000186835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038608	Dock10	ENSMUST00000187698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038608	Dock10	ENSMUST00000190595	ENSMUSP00000139567	TRANSLATION	protein_coding	start	-	5	1816	0	9.75	0	895.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038608	Dock10	ENSMUST00000186087	ENSMUSP00000140102	TRANSLATION	protein_coding	stop	-	5	546	13	2.64	0	169.4	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000038608	Dock10	ENSMUST00000187885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038608	Dock10	ENSMUST00000077946	ENSMUSP00000077099	TRANSLATION	protein_coding	-	CCDS48297.1	5	2187	13	11.89	1.5	1068	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000038608	Dock10	ENSMUST00000191505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038608	Dock10	ENSMUST00000190983	ENSMUSP00000140719	TRANSLATION	protein_coding	-	-	1	2151	13	11.89	0.5	1068	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000038608	Dock10	ENSMUST00000189486	ENSMUSP00000140868	TRANSLATION	protein_coding	start	-	5	564	0	9.75	0	591.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038608	Dock10	ENSMUST00000187774	ENSMUSP00000140085	TRANSLATION	protein_coding	-	CCDS78626.1	1	2175	13	11.89	1.5	1068	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000026578	Ccdc181	ENSMUST00000027867	ENSMUSP00000027867	TRANSLATION	protein_coding	-	CCDS15434.1	1	509	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000026117	Zap70	ENSMUST00000185871	ENSMUSP00000139990	TRANSLATION	protein_coding	stop	-	2	85	0	1	0	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026117	Zap70	ENSMUST00000027291	ENSMUSP00000027291	TRANSLATION	protein_coding	-	CCDS14888.1	1	618	4	11.55	5.1	440.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026117	Zap70	ENSMUST00000186624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026117	Zap70	ENSMUST00000190128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026649	Cfap126	ENSMUST00000156789	ENSMUSP00000139558	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026649	Cfap126	ENSMUST00000027959	ENSMUSP00000027959	TRANSLATION	protein_coding	-	CCDS35771.1	1	189	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000026649	Cfap126	ENSMUST00000151340	ENSMUSP00000123188	TRANSLATION	protein_coding	stop	-	3	188	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026649	Cfap126	ENSMUST00000148200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026649	Cfap126	ENSMUST00000129651	ENSMUSP00000114967	TRANSLATION	protein_coding	-	-	2	233	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000026649	Cfap126	ENSMUST00000127394	ENSMUSP00000117289	TRANSLATION	protein_coding	stop	-	5	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026649	Cfap126	ENSMUST00000143623	ENSMUSP00000137709	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026649	Cfap126	ENSMUST00000124157	ENSMUSP00000115108	TRANSLATION	protein_coding	start/stop	-	3	176	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025980	Hspd1	ENSMUST00000027123	ENSMUSP00000027123	TRANSLATION	protein_coding	-	CCDS35569.1	1	573	24	10.75	1.5	289.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000025980	Hspd1	ENSMUST00000127861	ENSMUSP00000119336	TRANSLATION	protein_coding	stop	-	2	202	13	3.75	0	131.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025980	Hspd1	ENSMUST00000144077	ENSMUSP00000122947	TRANSLATION	protein_coding	stop	-	2	142	11	2	0	97	0	-4,0	-	-	-1	MINOR
ENSMUSG00000113973	A030014E15Rik	ENSMUST00000223400	ENSMUSP00000152588	TRANSLATION	protein_coding	-	-	-	120	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026466	Tor1aip1	ENSMUST00000027738	ENSMUSP00000027738	TRANSLATION	protein_coding	-	CCDS15387.1	1	520	0	2.1	0.5	544.2	2	-4,-5	-	-	10.506	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000141878	ENSMUSP00000123391	TRANSLATION	protein_coding	stop	-	3	176	0	0	0	36.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000169241	ENSMUSP00000126751	TRANSLATION	protein_coding	-	CCDS48401.1	3	391	0	2.1	0.5	543.2	2	-4,-5	-	-	10.446	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000136331	ENSMUSP00000137617	TRANSLATION	nonsense_mediated_decay	-	-	2	291	0	0	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000130995	ENSMUSP00000141619	TRANSLATION	nonsense_mediated_decay	-	-	2	324	0	0	0	25	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000141980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026466	Tor1aip1	ENSMUST00000097527	ENSMUSP00000095134	TRANSLATION	protein_coding	-	CCDS48402.1	1	576	0	2.1	0.5	569.1	2	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026466	Tor1aip1	ENSMUST00000136397	ENSMUSP00000118654	TRANSLATION	protein_coding	stop	-	3	190	0	1.1	0	64.4	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000123705	ENSMUSP00000120602	TRANSLATION	nonsense_mediated_decay	start	-	5	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026466	Tor1aip1	ENSMUST00000124212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026011	Ctla4	ENSMUST00000097720	ENSMUSP00000095327	TRANSLATION	protein_coding	-	CCDS69893.1	5	174	0	1	1.5	54	0	0,-4	-	-	9.75	MINOR
ENSMUSG00000026011	Ctla4	ENSMUST00000027164	ENSMUSP00000027164	TRANSLATION	protein_coding	-	CCDS14993.1	1	223	0	1.6	1.5	54	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000026011	Ctla4	ENSMUST00000124816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026348	Acmsd	ENSMUST00000038006	ENSMUSP00000048482	TRANSLATION	protein_coding	-	CCDS15247.1	1	336	4	8.25	18.3	251.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026348	Acmsd	ENSMUST00000186537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007107	Atp1a4	ENSMUST00000111243	ENSMUSP00000106874	TRANSLATION	protein_coding	-	CCDS48446.1	5	1032	25	20.48	0.5	442.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000007107	Atp1a4	ENSMUST00000193316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037432	Fer1l5	ENSMUST00000179162	ENSMUSP00000142130	TRANSLATION	protein_coding	-	CCDS78562.1	1	2038	10	5.86	0.5	379.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037432	Fer1l5	ENSMUST00000140452	ENSMUSP00000144430	TRANSLATION	nonsense_mediated_decay	start	-	1	209	4	0.76	0	25.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037432	Fer1l5	ENSMUST00000202030	ENSMUSP00000143919	TRANSLATION	nonsense_mediated_decay	start	-	1	261	0	0	0	38.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041722	Khdc1c	ENSMUST00000070223	ENSMUSP00000068792	TRANSLATION	protein_coding	-	CCDS48228.1	1	166	0	0	0.5	79.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000086056	Gm4846	ENSMUST00000143922	ENSMUSP00000123476	TRANSLATION	protein_coding	-	CCDS48433.1	1	538	39	3.18	1.5	785	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000118590	AC167036.1	ENSMUST00000239195	ENSMUSP00000159245	TRANSLATION	protein_coding	-	-	-	296	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000026663	Atf6	ENSMUST00000027974	ENSMUSP00000027974	TRANSLATION	protein_coding	-	CCDS56653.1	1	656	0	0.8	1.5	42.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026663	Atf6	ENSMUST00000182787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026709	Dars2	ENSMUST00000162654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026709	Dars2	ENSMUST00000035430	ENSMUSP00000041851	TRANSLATION	protein_coding	-	CCDS15413.1	1	653	16	14.5	1.5	350.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000026709	Dars2	ENSMUST00000162398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026709	Dars2	ENSMUST00000160759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026709	Dars2	ENSMUST00000159922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026709	Dars2	ENSMUST00000161748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026709	Dars2	ENSMUST00000160591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037872	Ackr1	ENSMUST00000194298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037872	Ackr1	ENSMUST00000194046	ENSMUSP00000141765	TRANSLATION	protein_coding	-	-	1	174	0	0.32	0	0	2	-4,-6	-	-	1.374	MINOR
ENSMUSG00000037872	Ackr1	ENSMUST00000038227	ENSMUSP00000045134	TRANSLATION	protein_coding	-	CCDS35789.1	1	334	0	1.4	1.5	0	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000057363	Uxs1	ENSMUST00000136704	ENSMUSP00000121869	TRANSLATION	nonsense_mediated_decay	-	-	5	40	3	0.2	0	31.3	0	-1,1	-	-	-1	MINOR
ENSMUSG00000057363	Uxs1	ENSMUST00000128261	ENSMUSP00000116719	TRANSLATION	protein_coding	stop	-	5	127	3	0.95	0	113.9	0	0,2	-	-	-1	MINOR
ENSMUSG00000057363	Uxs1	ENSMUST00000134860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057363	Uxs1	ENSMUST00000126008	ENSMUSP00000119939	TRANSLATION	protein_coding	-	CCDS35551.1	1	420	54	10.7	11.6	317.9	0	0,1	-	-	21	PRINCIPAL:1
ENSMUSG00000057363	Uxs1	ENSMUST00000136179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057363	Uxs1	ENSMUST00000076997	ENSMUSP00000076259	TRANSLATION	nonsense_mediated_decay	-	-	1	108	3	0.95	0	129.8	0	0,1	-	-	-1	MINOR
ENSMUSG00000057363	Uxs1	ENSMUST00000139451	ENSMUSP00000118468	TRANSLATION	protein_coding	stop	-	5	254	40	5.7	0	233.5	0	0,2	-	-	-1	MINOR
ENSMUSG00000057363	Uxs1	ENSMUST00000153317	ENSMUSP00000144114	TRANSLATION	protein_coding	stop	-	3	110	21	2.7	0	65	0	-2,0	-	-	-1	MINOR
ENSMUSG00000090486	BC035947	ENSMUST00000170511	ENSMUSP00000132488	TRANSLATION	protein_coding	-	-	1	695	0	0.16	0	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000090486	BC035947	ENSMUST00000190853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042807	Hecw2	ENSMUST00000152870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042807	Hecw2	ENSMUST00000120904	ENSMUSP00000113283	TRANSLATION	protein_coding	-	CCDS14956.1	5	1578	9	17.03	1.5	631	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000042807	Hecw2	ENSMUST00000097741	ENSMUSP00000095348	TRANSLATION	protein_coding	-	CCDS14957.1	1	294	3	3	0.5	246	0	-4,0	-	-	1.998	MINOR
ENSMUSG00000042807	Hecw2	ENSMUST00000087659	ENSMUSP00000084942	TRANSLATION	protein_coding	-	CCDS14956.1	5	1578	9	17.03	1.5	631	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000042807	Hecw2	ENSMUST00000146850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042807	Hecw2	ENSMUST00000150677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043716	Rpl7	ENSMUST00000141217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043716	Rpl7	ENSMUST00000151017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043716	Rpl7	ENSMUST00000149566	ENSMUSP00000118695	TRANSLATION	protein_coding	start/stop	-	3	279	0	0	0	190	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043716	Rpl7	ENSMUST00000058437	ENSMUSP00000071616	TRANSLATION	protein_coding	-	CCDS14829.1	1	270	0	0	0.5	190	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043716	Rpl7	ENSMUST00000125005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043716	Rpl7	ENSMUST00000140597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026411	Tmem9	ENSMUST00000165125	ENSMUSP00000128185	TRANSLATION	protein_coding	-	CCDS15323.1	3	183	0	0	6.3	185	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000026411	Tmem9	ENSMUST00000063719	ENSMUSP00000065409	TRANSLATION	protein_coding	-	CCDS15323.1	1	183	0	0	6.3	185	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000026411	Tmem9	ENSMUST00000140545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026411	Tmem9	ENSMUST00000118832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026411	Tmem9	ENSMUST00000117950	ENSMUSP00000113416	TRANSLATION	protein_coding	-	CCDS15323.1	2	183	0	0	6.3	185	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000026705	Klhl20	ENSMUST00000192890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026705	Klhl20	ENSMUST00000145736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026705	Klhl20	ENSMUST00000111611	ENSMUSP00000107238	TRANSLATION	protein_coding	-	CCDS35748.1	1	604	0	10.12	0.5	547.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026705	Klhl20	ENSMUST00000140905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026705	Klhl20	ENSMUST00000148952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026705	Klhl20	ENSMUST00000195584	ENSMUSP00000141213	TRANSLATION	nonsense_mediated_decay	start	-	1	95	0	2.48	0	76.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026705	Klhl20	ENSMUST00000117467	ENSMUSP00000114044	TRANSLATION	nonsense_mediated_decay	-	-	1	604	0	10.12	0.5	547.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026187	Xrcc5	ENSMUST00000027379	ENSMUSP00000027379	TRANSLATION	protein_coding	-	CCDS35608.1	1	732	0	17.53	2.7	559.2	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025986	Slc39a10	ENSMUST00000186852	ENSMUSP00000140176	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000025986	Slc39a10	ENSMUST00000185520	ENSMUSP00000140570	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025986	Slc39a10	ENSMUST00000141226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025986	Slc39a10	ENSMUST00000027131	ENSMUSP00000027131	TRANSLATION	protein_coding	-	CCDS14936.1	1	833	0	0	7.5	226.2	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000026031	Cflar	ENSMUST00000114313	ENSMUSP00000109952	TRANSLATION	protein_coding	-	CCDS14978.1	1	481	0	6.04	0.5	208.3	0	-4,-5	-	-	11.88	PRINCIPAL:2
ENSMUSG00000026031	Cflar	ENSMUST00000123032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000097722	ENSMUSP00000095329	TRANSLATION	protein_coding	-	-	5	484	0	6.0994	0	208.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026031	Cflar	ENSMUST00000189858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026031	Cflar	ENSMUST00000149874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000124567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000097723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000114309	ENSMUSP00000109948	TRANSLATION	protein_coding	-	CCDS35582.1	1	215	0	2.49	1.5	124.9	0	-4,-5	-	-	0.996	MINOR
ENSMUSG00000026031	Cflar	ENSMUST00000123553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000164900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000140940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026031	Cflar	ENSMUST00000069333	ENSMUSP00000065107	TRANSLATION	protein_coding	-	CCDS14978.1	1	481	0	6.04	0.5	208.3	0	-4,-5	-	-	11.88	PRINCIPAL:2
ENSMUSG00000026031	Cflar	ENSMUST00000156870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026675	Hsd17b7	ENSMUST00000123230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026675	Hsd17b7	ENSMUST00000133563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026675	Hsd17b7	ENSMUST00000027989	ENSMUSP00000027989	TRANSLATION	protein_coding	-	CCDS35766.1	1	334	29	3.69	3.9	91.9	0	-2,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000026675	Hsd17b7	ENSMUST00000111353	ENSMUSP00000106985	TRANSLATION	protein_coding	-	-	1	362	29	3.69	0	91.9	0	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000066677	Ifi208	ENSMUST00000085876	ENSMUSP00000083039	TRANSLATION	protein_coding	-	CCDS48451.1	1	588	0	1	0.5	44.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066677	Ifi208	ENSMUST00000182880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066677	Ifi208	ENSMUST00000169857	ENSMUSP00000128958	TRANSLATION	protein_coding	-	CCDS48451.1	5	588	0	1	0.5	44.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000006010	Odr4	ENSMUST00000140112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006010	Odr4	ENSMUST00000150615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006010	Odr4	ENSMUST00000097546	ENSMUSP00000095152	TRANSLATION	protein_coding	-	-	5	425	0	0	0	370.8	1	-4,-5	-	-	4.392	MINOR
ENSMUSG00000006010	Odr4	ENSMUST00000132809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006010	Odr4	ENSMUST00000094477	ENSMUSP00000092050	TRANSLATION	nonsense_mediated_decay	-	-	5	339	0	0	0	337	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006010	Odr4	ENSMUST00000006167	ENSMUSP00000006167	TRANSLATION	protein_coding	-	-	5	425	0	0	0	370.8	1	-4,-5	-	-	4.392	MINOR
ENSMUSG00000006010	Odr4	ENSMUST00000097547	ENSMUSP00000095153	TRANSLATION	protein_coding	-	CCDS35733.1	5	415	0	0	0.5	349.7	1	-4,-5	-	-	3.126	MINOR
ENSMUSG00000006010	Odr4	ENSMUST00000111913	ENSMUSP00000107544	TRANSLATION	protein_coding	-	CCDS15355.2	5	447	0	0	1.5	397.6	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006010	Odr4	ENSMUST00000148389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045382	Cxcr4	ENSMUST00000142893	ENSMUSP00000120153	TRANSLATION	protein_coding	stop	-	1	272	0	1	0	205.9	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000045382	Cxcr4	ENSMUST00000052172	ENSMUSP00000053489	TRANSLATION	protein_coding	-	CCDS15254.1	1	359	0	1.6	0.5	230.2	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026211	Obsl1	ENSMUST00000156499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000156705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000132252	ENSMUSP00000117420	TRANSLATION	protein_coding	start/stop	-	5	417	0	3.88	0	128	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026211	Obsl1	ENSMUST00000145382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000155084	ENSMUSP00000114553	TRANSLATION	protein_coding	start	-	2	1162	0	10.3	0	277.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026211	Obsl1	ENSMUST00000129403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000138352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000145306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000113565	ENSMUSP00000109195	TRANSLATION	protein_coding	-	CCDS78624.1	1	1025	0	7.62	1.5	292.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000026211	Obsl1	ENSMUST00000150293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026211	Obsl1	ENSMUST00000127507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026211	Obsl1	ENSMUST00000113567	ENSMUSP00000109197	TRANSLATION	protein_coding	-	CCDS15077.2	1	1804	0	17.64	1.5	524.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026211	Obsl1	ENSMUST00000154636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032908	Sgpp2	ENSMUST00000036172	ENSMUSP00000036656	TRANSLATION	protein_coding	-	CCDS15083.1	1	354	4	0	1.5	59.5	0	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000060679	Mrps9	ENSMUST00000187414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060679	Mrps9	ENSMUST00000202358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060679	Mrps9	ENSMUST00000201108	ENSMUSP00000143932	TRANSLATION	nonsense_mediated_decay	start	-	5	129	0	2.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060679	Mrps9	ENSMUST00000185376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060679	Mrps9	ENSMUST00000185523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060679	Mrps9	ENSMUST00000057208	ENSMUSP00000056855	TRANSLATION	protein_coding	-	CCDS14918.1	1	390	0	8.71	1.5	126.6	0	0,0	-	-	12	PRINCIPAL:1
ENSMUSG00000060679	Mrps9	ENSMUST00000188174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043015	Nemp2	ENSMUST00000190108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043015	Nemp2	ENSMUST00000185483	ENSMUSP00000139513	TRANSLATION	nonsense_mediated_decay	-	-	1	209	0	0	0	70.6	5	3,-2	-	-	-1	MINOR
ENSMUSG00000043015	Nemp2	ENSMUST00000191076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043015	Nemp2	ENSMUST00000165859	ENSMUSP00000129351	TRANSLATION	protein_coding	-	CCDS48257.1	5	421	0	0	0.5	284.2	9	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000043015	Nemp2	ENSMUST00000190452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043015	Nemp2	ENSMUST00000185790	ENSMUSP00000140351	TRANSLATION	nonsense_mediated_decay	start	-	1	89	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000043015	Nemp2	ENSMUST00000186903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043015	Nemp2	ENSMUST00000188507	ENSMUSP00000140152	TRANSLATION	nonsense_mediated_decay	-	-	1	235	0	0	0	72.5	6	3,-2	-	-	-1	MINOR
ENSMUSG00000026399	Cd55	ENSMUST00000027650	ENSMUSP00000027650	TRANSLATION	protein_coding	-	CCDS15256.1	1	390	0	6.598	0.5	165.6	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026399	Cd55	ENSMUST00000133057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026399	Cd55	ENSMUST00000122830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026399	Cd55	ENSMUST00000140725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026399	Cd55	ENSMUST00000140400	ENSMUSP00000122294	TRANSLATION	protein_coding	start	-	2	197	0	1.248	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026090	2010300C02Rik	ENSMUST00000160023	ENSMUSP00000125015	TRANSLATION	protein_coding	start	-	1	652	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026090	2010300C02Rik	ENSMUST00000162875	ENSMUSP00000123803	TRANSLATION	protein_coding	-	CCDS48242.1	1	1175	0	0	0.5	105	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026090	2010300C02Rik	ENSMUST00000160589	ENSMUSP00000124777	TRANSLATION	protein_coding	stop	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049515	Espnl	ENSMUST00000088904	ENSMUSP00000086294	TRANSLATION	protein_coding	-	CCDS15160.1	1	1005	0	5.62	0.5	139.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049515	Espnl	ENSMUST00000176156	ENSMUSP00000135828	TRANSLATION	protein_coding	-	-	5	961	0	4.62	0	128.3	0	-4,-5	-	-	9.318	MINOR
ENSMUSG00000114011	Gm47955	ENSMUST00000223536	ENSMUSP00000152433	TRANSLATION	protein_coding	-	-	-	161	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000103711	Tstd1	ENSMUST00000193060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000103711	Tstd1	ENSMUST00000194029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103711	Tstd1	ENSMUST00000171362	ENSMUSP00000132771	TRANSLATION	protein_coding	-	CCDS48443.1	2	133	0	2.65	1.5	51.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000100617	Gm7145	ENSMUST00000185381	ENSMUSP00000140916	TRANSLATION	protein_coding	-	-	3	360	36	1.8	0	319.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039239	Tgfb2	ENSMUST00000045288	ENSMUSP00000043849	TRANSLATION	protein_coding	-	CCDS15601.1	1	414	0	4.06	11.5	210.3	0	4,-1	-	-	14.97	PRINCIPAL:1
ENSMUSG00000039239	Tgfb2	ENSMUST00000193640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039239	Tgfb2	ENSMUST00000195201	ENSMUSP00000142149	TRANSLATION	protein_coding	-	CCDS83659.1	1	442	0	4.075	7.5	202.3	0	4,-1	-	-	13.377	MINOR
ENSMUSG00000039239	Tgfb2	ENSMUST00000194593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039239	Tgfb2	ENSMUST00000191766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039239	Tgfb2	ENSMUST00000194960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101337	Dnah7c	ENSMUST00000189339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101337	Dnah7c	ENSMUST00000191499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101337	Dnah7c	ENSMUST00000178395	ENSMUSP00000136771	TRANSLATION	protein_coding	start/stop	-	1	204	12	4.5	0	267.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000101337	Dnah7c	ENSMUST00000187094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101337	Dnah7c	ENSMUST00000189749	ENSMUSP00000140430	TRANSLATION	protein_coding	-	CCDS78579.1	5	4024	64	30.25	0.5	2681.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054545	Ugt1a6a	ENSMUST00000113134	ENSMUSP00000108759	TRANSLATION	protein_coding	-	CCDS48314.1	1	531	18	3.54	1.7	765.8	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000054545	Ugt1a6a	ENSMUST00000124852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054545	Ugt1a6a	ENSMUST00000014263	ENSMUSP00000014263	TRANSLATION	protein_coding	-	CCDS48314.1	1	531	18	3.54	1.7	765.8	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000054545	Ugt1a6a	ENSMUST00000140092	ENSMUSP00000115642	TRANSLATION	protein_coding	stop	-	3	166	16	3.42	0	324	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033845	Mrpl15	ENSMUST00000146665	ENSMUSP00000141204	TRANSLATION	protein_coding	-	-	1	168	0	3.5	0.5	67.9	0	-4,-1	-	-	6.156	MINOR
ENSMUSG00000033845	Mrpl15	ENSMUST00000132625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033845	Mrpl15	ENSMUST00000156816	ENSMUSP00000115512	TRANSLATION	protein_coding	-	CCDS48211.1	1	295	0	5.5	5.1	98	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000033845	Mrpl15	ENSMUST00000115538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033845	Mrpl15	ENSMUST00000130201	ENSMUSP00000114649	TRANSLATION	protein_coding	-	CCDS35504.1	1	204	0	4.65	1.5	98	0	-4,-1	-	-	10.546	MINOR
ENSMUSG00000033845	Mrpl15	ENSMUST00000045689	ENSMUSP00000048472	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033845	Mrpl15	ENSMUST00000192286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037499	Nenf	ENSMUST00000046770	ENSMUSP00000046311	TRANSLATION	protein_coding	-	CCDS15618.1	1	171	0	2.55	2.7	48.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026204	Ptprn	ENSMUST00000185849	ENSMUSP00000140062	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	63.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026204	Ptprn	ENSMUST00000186178	ENSMUSP00000139925	TRANSLATION	protein_coding	stop	-	2	141	0	0	0	121.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026204	Ptprn	ENSMUST00000027404	ENSMUSP00000027404	TRANSLATION	protein_coding	-	CCDS35625.1	1	981	10	10.3	0.5	483.7	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000026204	Ptprn	ENSMUST00000188401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026204	Ptprn	ENSMUST00000187216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026204	Ptprn	ENSMUST00000189769	ENSMUSP00000140168	TRANSLATION	protein_coding	start/stop	-	3	170	0	0	0	121.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062729	Ppox	ENSMUST00000133050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062729	Ppox	ENSMUST00000145019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062729	Ppox	ENSMUST00000126765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062729	Ppox	ENSMUST00000151442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062729	Ppox	ENSMUST00000073120	ENSMUSP00000072863	TRANSLATION	protein_coding	-	CCDS15487.1	1	477	34	11	6.3	214.7	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000062729	Ppox	ENSMUST00000155083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062729	Ppox	ENSMUST00000192956	ENSMUSP00000141835	TRANSLATION	protein_coding	stop	-	5	389	26	9.028	0	138.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000062729	Ppox	ENSMUST00000152689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003051	Elf3	ENSMUST00000188895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003051	Elf3	ENSMUST00000185752	ENSMUSP00000139769	TRANSLATION	protein_coding	-	CCDS78689.1	1	371	0	3.2	5.2	185.2	0	-4,-5	-	-	13.982	PRINCIPAL:1
ENSMUSG00000003051	Elf3	ENSMUST00000003135	ENSMUSP00000003135	TRANSLATION	protein_coding	-	CCDS48372.1	1	391	0	3.2	1.5	185.5	0	-4,-5	-	-	12.238	MINOR
ENSMUSG00000025962	Fastkd2	ENSMUST00000123945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025962	Fastkd2	ENSMUST00000128621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025962	Fastkd2	ENSMUST00000148758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025962	Fastkd2	ENSMUST00000131478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025962	Fastkd2	ENSMUST00000027103	ENSMUSP00000027103	TRANSLATION	protein_coding	-	CCDS15001.1	1	689	0	0	1.5	110.8	0	-3,0	-	-	6	PRINCIPAL:1
ENSMUSG00000025962	Fastkd2	ENSMUST00000134454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042451	Mybph	ENSMUST00000191577	ENSMUSP00000141104	TRANSLATION	protein_coding	-	CCDS35713.1	5	483	0	7.35	1.5	201.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042451	Mybph	ENSMUST00000038445	ENSMUSP00000042195	TRANSLATION	protein_coding	-	CCDS35713.1	1	483	0	7.35	1.5	201.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026696	Vamp4	ENSMUST00000138499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026696	Vamp4	ENSMUST00000155003	ENSMUSP00000114172	TRANSLATION	protein_coding	-	CCDS83616.1	3	141	0	2.35	10.6	110.7	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026696	Vamp4	ENSMUST00000132158	ENSMUSP00000121977	TRANSLATION	protein_coding	-	CCDS15421.1	3	141	0	2.35	1.5	107.5	1	-4,-5	-	-	11.964	MINOR
ENSMUSG00000026696	Vamp4	ENSMUST00000194810	ENSMUSP00000142298	TRANSLATION	protein_coding	-	-	5	100	0	1	1.2	0	0	-4,-5	-	-	2.619	MINOR
ENSMUSG00000026696	Vamp4	ENSMUST00000150040	ENSMUSP00000115133	TRANSLATION	protein_coding	-	CCDS83616.1	5	141	0	2.35	10.6	110.7	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026696	Vamp4	ENSMUST00000128704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026696	Vamp4	ENSMUST00000050010	ENSMUSP00000051544	TRANSLATION	protein_coding	-	CCDS15421.1	1	141	0	2.35	1.5	107.5	1	-4,-5	-	-	11.964	MINOR
ENSMUSG00000026696	Vamp4	ENSMUST00000135241	ENSMUSP00000116376	TRANSLATION	protein_coding	-	CCDS83616.1	1	141	0	2.35	10.6	110.7	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041926	Rnpep	ENSMUST00000141092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041926	Rnpep	ENSMUST00000141234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041926	Rnpep	ENSMUST00000190632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041926	Rnpep	ENSMUST00000130069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041926	Rnpep	ENSMUST00000152169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041926	Rnpep	ENSMUST00000188053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041926	Rnpep	ENSMUST00000189615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041926	Rnpep	ENSMUST00000074357	ENSMUSP00000073962	TRANSLATION	protein_coding	-	CCDS48373.1	1	611	15	6.88	0.5	273	0	-4,-1	-	-	14.532	MINOR
ENSMUSG00000041926	Rnpep	ENSMUST00000077340	ENSMUSP00000076564	TRANSLATION	protein_coding	-	CCDS15317.1	1	650	15	7.88	1.7	297.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026659	Dusp12	ENSMUST00000170420	ENSMUSP00000129515	TRANSLATION	nonsense_mediated_decay	-	-	1	141	0	2.4	0	27.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026659	Dusp12	ENSMUST00000172042	ENSMUSP00000129530	TRANSLATION	protein_coding	stop	-	5	34	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026659	Dusp12	ENSMUST00000027970	ENSMUSP00000027970	TRANSLATION	protein_coding	-	CCDS15474.1	1	339	11	4.792	2.7	94.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026659	Dusp12	ENSMUST00000046476	ENSMUSP00000044320	TRANSLATION	nonsense_mediated_decay	-	-	1	163	7	3.594	0	86.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026659	Dusp12	ENSMUST00000166393	ENSMUSP00000130507	TRANSLATION	nonsense_mediated_decay	start	-	5	138	0	2.4	0	27.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026659	Dusp12	ENSMUST00000171447	ENSMUSP00000130683	TRANSLATION	protein_coding	start	-	5	180	8	3.792	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026659	Dusp12	ENSMUST00000163252	ENSMUSP00000126676	TRANSLATION	nonsense_mediated_decay	start	-	1	137	0	2.4	0	27.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053333	Dis3l2	ENSMUST00000188121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053333	Dis3l2	ENSMUST00000186682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053333	Dis3l2	ENSMUST00000168237	ENSMUSP00000132673	TRANSLATION	protein_coding	-	CCDS48304.1	1	884	3	15.85	0.5	338.6	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000053333	Dis3l2	ENSMUST00000065694	ENSMUSP00000070506	TRANSLATION	protein_coding	-	CCDS15124.1	1	870	3	15.85	0.5	338.6	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000053333	Dis3l2	ENSMUST00000189044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053333	Dis3l2	ENSMUST00000190618	ENSMUSP00000139579	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	2.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036975	Tmem177	ENSMUST00000037906	ENSMUSP00000042416	TRANSLATION	protein_coding	-	CCDS15228.1	1	311	0	0	6.3	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000026188	Tmem169	ENSMUST00000027380	ENSMUSP00000027380	TRANSLATION	protein_coding	-	CCDS15033.1	1	297	0	0	6.3	208.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000026188	Tmem169	ENSMUST00000141783	ENSMUSP00000114990	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073722	4931408C20Rik	ENSMUST00000097801	ENSMUSP00000095410	TRANSLATION	protein_coding	-	CCDS14856.1	1	1381	0	0	0.5	89.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026368	F13b	ENSMUST00000141842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026368	F13b	ENSMUST00000027615	ENSMUSP00000027615	TRANSLATION	protein_coding	-	CCDS48386.1	1	669	0	7.96	0.5	282.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026331	Slco6c1	ENSMUST00000027569	ENSMUSP00000027569	TRANSLATION	protein_coding	-	CCDS35677.1	1	706	0	0	0.5	403	8	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000026331	Slco6c1	ENSMUST00000189547	ENSMUSP00000140791	TRANSLATION	protein_coding	-	-	1	689	0	0	0	386.7	8	-4,-5	-	-	5.022	ALTERNATIVE:2
ENSMUSG00000033684	Qsox1	ENSMUST00000132495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033684	Qsox1	ENSMUST00000194632	ENSMUSP00000142301	TRANSLATION	protein_coding	-	CCDS78713.1	1	568	27	11.5	0.5	148.6	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000033684	Qsox1	ENSMUST00000195419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033684	Qsox1	ENSMUST00000130701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033684	Qsox1	ENSMUST00000111764	ENSMUSP00000107394	TRANSLATION	protein_coding	-	-	1	661	27	11.5	0	148.3	0	4,-1	-	-	17.982	ALTERNATIVE:2
ENSMUSG00000033684	Qsox1	ENSMUST00000035325	ENSMUSP00000035658	TRANSLATION	protein_coding	-	CCDS15386.1	1	748	27	11.5	0.5	148.3	0	4,-1	-	-	17.982	PRINCIPAL:3
ENSMUSG00000033684	Qsox1	ENSMUST00000140809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033684	Qsox1	ENSMUST00000151368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026226	Spata3	ENSMUST00000130504	ENSMUSP00000116903	TRANSLATION	protein_coding	-	CCDS15116.1	1	192	0	0	1.5	310.4	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000026226	Spata3	ENSMUST00000135440	ENSMUSP00000123587	TRANSLATION	protein_coding	-	-	1	171	0	0	0.5	246.9	0	-4,-2	-	-	2.19	MINOR
ENSMUSG00000026226	Spata3	ENSMUST00000129169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026226	Spata3	ENSMUST00000052854	ENSMUSP00000050509	TRANSLATION	protein_coding	-	CCDS35643.1	1	193	0	0	1.5	307.8	0	-4,-2	-	-	5.844	ALTERNATIVE:2
ENSMUSG00000026226	Spata3	ENSMUST00000159876	ENSMUSP00000124671	TRANSLATION	protein_coding	-	CCDS35643.1	5	193	0	0	1.5	307.8	0	-4,-2	-	-	5.844	ALTERNATIVE:2
ENSMUSG00000026226	Spata3	ENSMUST00000113344	ENSMUSP00000108971	TRANSLATION	protein_coding	-	CCDS15116.1	1	192	0	0	1.5	310.4	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000026226	Spata3	ENSMUST00000153247	ENSMUSP00000117650	TRANSLATION	protein_coding	-	-	1	138	0	0	0	93.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026226	Spata3	ENSMUST00000131151	ENSMUSP00000123844	TRANSLATION	protein_coding	start	-	3	174	0	0	0	271.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026226	Spata3	ENSMUST00000125083	ENSMUSP00000120768	TRANSLATION	protein_coding	-	-	1	89	0	0	0	81.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026226	Spata3	ENSMUST00000149469	ENSMUSP00000154290	TRANSLATION	protein_coding	-	-	5	333	0	0	0	222.4	0	-4,-5	-	-	0.72	MINOR
ENSMUSG00000026226	Spata3	ENSMUST00000152501	ENSMUSP00000123194	TRANSLATION	protein_coding	-	CCDS48301.1	1	170	0	0	0.5	249.5	0	-4,-2	-	-	2.346	MINOR
ENSMUSG00000026516	Nvl	ENSMUST00000027797	ENSMUSP00000027797	TRANSLATION	protein_coding	-	CCDS15581.1	1	855	27	13.65	3.9	406.7	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000026516	Nvl	ENSMUST00000193758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026516	Nvl	ENSMUST00000191728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026516	Nvl	ENSMUST00000191721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026516	Nvl	ENSMUST00000195209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026107	Nabp1	ENSMUST00000186684	ENSMUSP00000140179	TRANSLATION	protein_coding	-	CCDS78580.1	1	118	0	1.9	1.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000027279	ENSMUSP00000027279	TRANSLATION	protein_coding	-	CCDS35559.1	1	198	0	3.9	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026107	Nabp1	ENSMUST00000189542	ENSMUSP00000140059	TRANSLATION	nonsense_mediated_decay	-	-	1	118	0	1.9	1.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000185534	ENSMUSP00000140557	TRANSLATION	protein_coding	-	CCDS78580.1	2	118	0	1.9	1.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000188204	ENSMUSP00000140469	TRANSLATION	protein_coding	-	CCDS78580.1	1	118	0	1.9	1.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000186003	ENSMUSP00000140126	TRANSLATION	nonsense_mediated_decay	-	-	2	118	0	1.9	1.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000188051	ENSMUSP00000139853	TRANSLATION	protein_coding	-	CCDS78580.1	3	118	0	1.9	1.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000026107	Nabp1	ENSMUST00000188303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026107	Nabp1	ENSMUST00000185961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026107	Nabp1	ENSMUST00000190103	ENSMUSP00000140556	TRANSLATION	nonsense_mediated_decay	-	-	2	198	0	3.9	1.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000187628	ENSMUSP00000140058	TRANSLATION	protein_coding	-	-	5	90	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000188957	ENSMUSP00000140841	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000185614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010453	Kansl3	ENSMUST00000010597	ENSMUSP00000010597	TRANSLATION	protein_coding	-	CCDS14877.1	1	877	0	0	5.1	0	0	-4,-7	-	-	1.893	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000186470	ENSMUSP00000140597	TRANSLATION	protein_coding	-	CCDS78561.1	1	903	0	0	7.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000010453	Kansl3	ENSMUST00000188961	ENSMUSP00000140667	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000185912	ENSMUSP00000140547	TRANSLATION	protein_coding	-	-	1	778	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000185621	ENSMUSP00000141616	TRANSLATION	nonsense_mediated_decay	-	-	2	76	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010453	Kansl3	ENSMUST00000188528	ENSMUSP00000139711	TRANSLATION	nonsense_mediated_decay	-	-	3	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026036	Nif3l1	ENSMUST00000129759	ENSMUSP00000124713	TRANSLATION	nonsense_mediated_decay	-	-	5	155	1	1.1	0	138.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026036	Nif3l1	ENSMUST00000140723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026036	Nif3l1	ENSMUST00000087521	ENSMUSP00000084799	TRANSLATION	protein_coding	-	CCDS14973.1	1	376	3	3.25	5.1	268.1	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000026036	Nif3l1	ENSMUST00000151272	ENSMUSP00000123553	TRANSLATION	protein_coding	stop	-	2	131	1	0.6	0	116.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026036	Nif3l1	ENSMUST00000185578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026036	Nif3l1	ENSMUST00000188295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026036	Nif3l1	ENSMUST00000114337	ENSMUSP00000109976	TRANSLATION	protein_coding	-	-	2	329	1	2.65	0	211.3	0	-4,0	-	-	8.391	MINOR
ENSMUSG00000026036	Nif3l1	ENSMUST00000171597	ENSMUSP00000127501	TRANSLATION	protein_coding	-	CCDS14973.1	1	376	3	3.25	5.1	268.1	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000047539	Fbxo28	ENSMUST00000194213	ENSMUSP00000141219	TRANSLATION	nonsense_mediated_decay	-	-	3	195	0	0	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047539	Fbxo28	ENSMUST00000051431	ENSMUSP00000054718	TRANSLATION	protein_coding	-	CCDS15588.1	1	368	0	0	6.4	23.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047539	Fbxo28	ENSMUST00000195061	ENSMUSP00000141772	TRANSLATION	nonsense_mediated_decay	start	-	3	143	0	0	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047539	Fbxo28	ENSMUST00000192544	ENSMUSP00000141838	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	0	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047539	Fbxo28	ENSMUST00000193700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026437	Cdk18	ENSMUST00000027697	ENSMUSP00000027697	TRANSLATION	protein_coding	-	CCDS15281.1	1	451	18	9.83	1.5	241.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026437	Cdk18	ENSMUST00000112362	ENSMUSP00000107981	TRANSLATION	protein_coding	-	CCDS15281.1	1	451	18	9.83	1.5	241.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026437	Cdk18	ENSMUST00000189733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026437	Cdk18	ENSMUST00000188387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026437	Cdk18	ENSMUST00000185601	ENSMUSP00000140034	TRANSLATION	nonsense_mediated_decay	start	-	5	68	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026447	Pik3c2b	ENSMUST00000145153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026447	Pik3c2b	ENSMUST00000153707	ENSMUSP00000115469	TRANSLATION	protein_coding	stop	-	2	310	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026447	Pik3c2b	ENSMUST00000124934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026447	Pik3c2b	ENSMUST00000077730	ENSMUSP00000076911	TRANSLATION	protein_coding	-	CCDS48360.1	5	1632	0	18.19	1.5	651.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026447	Pik3c2b	ENSMUST00000239467	ENSMUSP00000159321	TRANSLATION	protein_coding	stop	-	-	240	0	0	0	96	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026510	Trp53bp2	ENSMUST00000191626	ENSMUSP00000141889	TRANSLATION	protein_coding	start/stop	-	3	189	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026510	Trp53bp2	ENSMUST00000117245	ENSMUSP00000112508	TRANSLATION	protein_coding	-	CCDS48476.1	5	1134	0	7.43	5.3	104	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026510	Trp53bp2	ENSMUST00000191804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026580	Selp	ENSMUST00000162746	ENSMUSP00000123924	TRANSLATION	protein_coding	-	CCDS48422.1	1	768	8	8.55	1.5	367.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026580	Selp	ENSMUST00000161020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026580	Selp	ENSMUST00000160000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026580	Selp	ENSMUST00000162102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026580	Selp	ENSMUST00000161152	ENSMUSP00000124231	TRANSLATION	nonsense_mediated_decay	start	-	1	46	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034159	Mab21l4	ENSMUST00000043718	ENSMUSP00000035332	TRANSLATION	protein_coding	-	CCDS15185.1	1	452	0	0	1.5	55.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034159	Mab21l4	ENSMUST00000143419	ENSMUSP00000115971	TRANSLATION	protein_coding	-	CCDS15185.1	1	452	0	0	1.5	55.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026241	Nppc	ENSMUST00000027449	ENSMUSP00000027449	TRANSLATION	protein_coding	-	CCDS15123.1	1	126	0	0.4	7.5	54.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000026688	Mgst3	ENSMUST00000028005	ENSMUSP00000028005	TRANSLATION	protein_coding	-	CCDS15457.1	1	153	8	0	8.8	86.6	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000039318	Rab3gap2	ENSMUST00000069652	ENSMUSP00000066325	TRANSLATION	protein_coding	-	CCDS48478.1	5	1387	0	0	1.5	1349.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039318	Rab3gap2	ENSMUST00000195534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039318	Rab3gap2	ENSMUST00000194740	ENSMUSP00000141608	TRANSLATION	protein_coding	-	-	5	1367	0	0	0.5	1321	0	-4,-5	-	-	4.314	MINOR
ENSMUSG00000039318	Rab3gap2	ENSMUST00000195042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039318	Rab3gap2	ENSMUST00000191966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039318	Rab3gap2	ENSMUST00000193482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042510	AA986860	ENSMUST00000186185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042510	AA986860	ENSMUST00000039323	ENSMUSP00000046172	TRANSLATION	protein_coding	-	CCDS48352.1	1	606	0	0	0.5	772.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042510	AA986860	ENSMUST00000190859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042671	Rgs8	ENSMUST00000111812	ENSMUSP00000107443	TRANSLATION	protein_coding	-	CCDS15375.1	5	180	0	4.616	12.8	130.5	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000042671	Rgs8	ENSMUST00000147794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042671	Rgs8	ENSMUST00000111815	ENSMUSP00000107446	TRANSLATION	protein_coding	-	CCDS83607.1	5	178	0	4.616	5.3	130.5	0	-4,-7	-	-	13.456	MINOR
ENSMUSG00000042671	Rgs8	ENSMUST00000147700	ENSMUSP00000123565	TRANSLATION	protein_coding	stop	-	3	115	0	3.116	0	61.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000042671	Rgs8	ENSMUST00000147482	ENSMUSP00000118365	TRANSLATION	protein_coding	stop	-	3	115	0	3.116	0	62.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042671	Rgs8	ENSMUST00000124500	ENSMUSP00000122518	TRANSLATION	protein_coding	stop	-	3	98	0	2.616	0	46.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000042671	Rgs8	ENSMUST00000041776	ENSMUSP00000045715	TRANSLATION	protein_coding	-	CCDS15375.1	1	180	0	4.616	12.8	130.5	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000042671	Rgs8	ENSMUST00000111814	ENSMUSP00000107445	TRANSLATION	protein_coding	-	CCDS83607.1	3	178	0	4.616	5.3	130.5	0	-4,-7	-	-	13.456	MINOR
ENSMUSG00000042671	Rgs8	ENSMUST00000111810	ENSMUSP00000107441	TRANSLATION	protein_coding	-	CCDS15375.1	1	180	0	4.616	12.8	130.5	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000042671	Rgs8	ENSMUST00000152114	ENSMUSP00000121910	TRANSLATION	protein_coding	stop	-	5	137	0	3.616	0	83.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000188346	ENSMUSP00000140588	TRANSLATION	protein_coding	-	CCDS35624.1	1	277	0	2.85	6.3	114.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000026203	Dnajb2	ENSMUST00000185403	ENSMUSP00000139982	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	1.95	0	87.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000188628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026203	Dnajb2	ENSMUST00000190445	ENSMUSP00000139573	TRANSLATION	nonsense_mediated_decay	start	-	5	110	0	0	0	21.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000055223	ENSMUSP00000052520	TRANSLATION	protein_coding	-	CCDS15068.1	5	259	0	2.35	1.5	105.6	0	-4,-5	-	-	10.622	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000186600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026203	Dnajb2	ENSMUST00000187058	ENSMUSP00000140637	TRANSLATION	protein_coding	-	CCDS15068.1	1	259	0	2.35	1.5	105.6	0	-4,-5	-	-	10.622	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000082158	ENSMUSP00000080796	TRANSLATION	protein_coding	-	CCDS35624.1	5	277	0	2.85	6.3	114.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000026203	Dnajb2	ENSMUST00000185654	ENSMUSP00000140456	TRANSLATION	protein_coding	stop	-	2	76	0	2.25	0	97.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026203	Dnajb2	ENSMUST00000188931	ENSMUSP00000140566	TRANSLATION	protein_coding	-	CCDS78622.1	1	324	0	2.85	5.1	114.2	0	-4,-5	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000026203	Dnajb2	ENSMUST00000188290	ENSMUSP00000140634	TRANSLATION	protein_coding	-	CCDS35624.1	1	277	0	2.85	6.3	114.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000026203	Dnajb2	ENSMUST00000190379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032883	Acsl3	ENSMUST00000132997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032883	Acsl3	ENSMUST00000148608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032883	Acsl3	ENSMUST00000035779	ENSMUSP00000045291	TRANSLATION	protein_coding	-	CCDS15087.1	1	720	22	7.32	7.5	346.3	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000032883	Acsl3	ENSMUST00000134566	ENSMUSP00000117952	TRANSLATION	protein_coding	-	CCDS48295.1	1	568	22	6.69	0.5	323.5	0	-4,-7	-	-	15.372	MINOR
ENSMUSG00000032883	Acsl3	ENSMUST00000135642	ENSMUSP00000116576	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000032883	Acsl3	ENSMUST00000154777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032883	Acsl3	ENSMUST00000142704	ENSMUSP00000121695	TRANSLATION	protein_coding	-	CCDS15087.1	1	720	22	7.32	7.5	346.3	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000066936	Gm10188	ENSMUST00000086544	ENSMUSP00000083731	TRANSLATION	protein_coding	-	-	-	135	0	0	0	0	0	3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000050565	Tor1aip2	ENSMUST00000128941	ENSMUSP00000135107	TRANSLATION	protein_coding	-	CCDS15388.1	1	131	6	0	7.5	0	0	-4,-5	-	-	9	MINOR
ENSMUSG00000050565	Tor1aip2	ENSMUST00000111754	ENSMUSP00000107383	TRANSLATION	protein_coding	-	CCDS15388.1	1	131	6	0	7.5	0	0	-4,-5	-	-	9	MINOR
ENSMUSG00000050565	Tor1aip2	ENSMUST00000131359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050565	Tor1aip2	ENSMUST00000111757	ENSMUSP00000107387	TRANSLATION	protein_coding	-	CCDS15389.1	1	502	0	1	0.5	727.8	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050565	Tor1aip2	ENSMUST00000097526	ENSMUSP00000095133	TRANSLATION	protein_coding	-	CCDS15388.1	1	131	6	0	7.5	0	0	-4,-5	-	-	9	MINOR
ENSMUSG00000050565	Tor1aip2	ENSMUST00000065648	ENSMUSP00000067353	TRANSLATION	protein_coding	-	CCDS15388.1	1	131	6	0	7.5	0	0	-4,-5	-	-	9	MINOR
ENSMUSG00000050565	Tor1aip2	ENSMUST00000060404	ENSMUSP00000050817	TRANSLATION	protein_coding	-	CCDS15389.1	1	502	0	1	0.5	727.8	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050565	Tor1aip2	ENSMUST00000125371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050565	Tor1aip2	ENSMUST00000133152	ENSMUSP00000118611	TRANSLATION	protein_coding	stop	-	3	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052726	Kcnt2	ENSMUST00000239229	ENSMUSP00000159210	TRANSLATION	protein_coding	stop	-	-	54	0	0.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052726	Kcnt2	ENSMUST00000120796	ENSMUSP00000113333	TRANSLATION	protein_coding	-	CCDS48389.1	5	1135	0	23.78	8.8	155.4	3	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000052726	Kcnt2	ENSMUST00000145077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052726	Kcnt2	ENSMUST00000192840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052726	Kcnt2	ENSMUST00000193606	ENSMUSP00000141947	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052726	Kcnt2	ENSMUST00000120709	ENSMUSP00000112887	TRANSLATION	protein_coding	-	-	5	1111	0	23.03	7.6	155.4	3	-4,-6	-	-	13.038	MINOR
ENSMUSG00000052726	Kcnt2	ENSMUST00000119786	ENSMUSP00000113535	TRANSLATION	protein_coding	-	-	5	1068	0	22.228	2.7	96.4	3	-4,-6	-	-	6.012	MINOR
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000141419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000168381	ENSMUSP00000131406	TRANSLATION	protein_coding	-	CCDS35717.1	1	992	0	8.9	0.5	243.8	0	-4,-2	-	-	10.5	MINOR
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000045665	ENSMUSP00000047463	TRANSLATION	protein_coding	-	-	5	976	0	8.9	0.5	268.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000137022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000146639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000238280	ENSMUSP00000158804	TRANSLATION	protein_coding	-	-	-	186	0	1.4	6.4	125	0	-4,-2	-	-	2	MINOR
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000156348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000132025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000112163	ENSMUSP00000107788	TRANSLATION	protein_coding	-	-	1	105	0	0.7	0	27.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000191540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073557	Ppp1r12b	ENSMUST00000086444	ENSMUSP00000083633	TRANSLATION	protein_coding	-	CCDS35717.1	5	992	0	8.9	0.5	243.8	0	-4,-2	-	-	10.5	MINOR
ENSMUSG00000041075	Fzd7	ENSMUST00000114246	ENSMUSP00000109884	TRANSLATION	protein_coding	-	CCDS14985.1	-	572	0	0.6	3.9	585.6	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000025963	Mdh1b	ENSMUST00000114094	ENSMUSP00000109728	TRANSLATION	protein_coding	-	CCDS15000.2	1	500	11	2.66	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033488	Cryzl2	ENSMUST00000119891	ENSMUSP00000113664	TRANSLATION	protein_coding	-	-	1	171	3	4.116	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000033488	Cryzl2	ENSMUST00000195702	ENSMUSP00000141761	TRANSLATION	protein_coding	start/stop	-	3	142	9	3.25	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000033488	Cryzl2	ENSMUST00000193791	ENSMUSP00000141717	TRANSLATION	protein_coding	-	-	2	213	9	5.63	0	0	0	-4,-1	-	-	0.198	MINOR
ENSMUSG00000033488	Cryzl2	ENSMUST00000194220	ENSMUSP00000142170	TRANSLATION	nonsense_mediated_decay	start	-	1	72	5	1.43	0	29.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033488	Cryzl2	ENSMUST00000046743	ENSMUSP00000044945	TRANSLATION	protein_coding	-	CCDS15399.1	1	350	22	8.53	1.5	75.7	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000036086	Zranb3	ENSMUST00000124876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036086	Zranb3	ENSMUST00000131732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036086	Zranb3	ENSMUST00000097597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036086	Zranb3	ENSMUST00000143389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036086	Zranb3	ENSMUST00000086614	ENSMUSP00000083806	TRANSLATION	protein_coding	-	CCDS35697.1	1	1069	11	4.87	0.5	153.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036086	Zranb3	ENSMUST00000127393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036086	Zranb3	ENSMUST00000112538	ENSMUSP00000108157	TRANSLATION	protein_coding	-	CCDS35697.1	1	1069	11	4.87	0.5	153.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000047053	Teddm1a	ENSMUST00000050660	ENSMUSP00000062098	TRANSLATION	protein_coding	-	CCDS15380.1	-	305	0	0	1.5	85.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026131	Dst	ENSMUST00000182410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026131	Dst	ENSMUST00000097785	ENSMUSP00000095392	TRANSLATION	protein_coding	-	CCDS35534.1	1	7393	14	36.025	0.5	1093.8	0	-4,-5	-	-	16.41	PRINCIPAL:3
ENSMUSG00000026131	Dst	ENSMUST00000187486	ENSMUSP00000140560	TRANSLATION	protein_coding	stop	-	5	1471	0	29.59	0	184.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000185736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026131	Dst	ENSMUST00000097786	ENSMUSP00000095393	TRANSLATION	protein_coding	-	CCDS35535.1	1	5379	14	36.025	1.5	1027.3	0	-4,-5	-	-	12.42	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000182314	ENSMUSP00000142098	TRANSLATION	protein_coding	-	-	1	282	0	5.89	0	115.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000183331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026131	Dst	ENSMUST00000185269	ENSMUSP00000141127	TRANSLATION	protein_coding	-	-	5	5175	15	25.455	1.5	875.7	0	-4,-2	-	-	6	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000182018	ENSMUSP00000138426	TRANSLATION	protein_coding	start	-	5	1638	15	6.755	0	526.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000185897	ENSMUSP00000139888	TRANSLATION	protein_coding	stop	-	5	2987	0	18.7	0	92.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000194192	ENSMUSP00000148563	TRANSLATION	protein_coding	stop	-	5	1674	0	2	0	300.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000189952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026131	Dst	ENSMUST00000183100	ENSMUSP00000138570	TRANSLATION	protein_coding	start/stop	-	3	262	15	2.46	0	158.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000182507	ENSMUSP00000138591	TRANSLATION	protein_coding	start/stop	-	2	259	15	2.46	0	158.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000115104	ENSMUSP00000110756	TRANSLATION	protein_coding	-	-	5	7406	15	36.025	0	1093.6	0	-4,-5	-	-	17.064	ALTERNATIVE:2
ENSMUSG00000026131	Dst	ENSMUST00000182697	ENSMUSP00000141811	TRANSLATION	protein_coding	-	-	1	274	0	5.89	0	115.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000182335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026131	Dst	ENSMUST00000183302	ENSMUSP00000138376	TRANSLATION	protein_coding	-	CCDS69875.1	1	2639	0	19.3	0.5	199.1	0	-4,-2	-	-	0	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000239001	ENSMUSP00000159126	TRANSLATION	protein_coding	stop	-	-	153	0	4.25	0	85.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026131	Dst	ENSMUST00000183034	ENSMUSP00000138308	TRANSLATION	protein_coding	-	CCDS69874.1	5	7717	14	36.345	0.5	1098.5	0	0,-5	-	-	17.334	ALTERNATIVE:2
ENSMUSG00000026131	Dst	ENSMUST00000183006	ENSMUSP00000158838	TRANSLATION	protein_coding	stop	-	5	386	0	3.75	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026234	Ncl	ENSMUST00000186050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026234	Ncl	ENSMUST00000189504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026234	Ncl	ENSMUST00000185785	ENSMUSP00000140696	TRANSLATION	protein_coding	stop	-	2	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026234	Ncl	ENSMUST00000027438	ENSMUSP00000027438	TRANSLATION	protein_coding	-	CCDS35646.1	1	707	3	8.15	0.5	203.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026234	Ncl	ENSMUST00000185676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026234	Ncl	ENSMUST00000188682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056569	Mpz	ENSMUST00000238940	ENSMUSP00000159043	TRANSLATION	protein_coding	-	CCDS15479.1	-	248	0	2	1.5	190	1	3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000056569	Mpz	ENSMUST00000111334	ENSMUSP00000106966	TRANSLATION	protein_coding	-	CCDS15479.1	1	248	0	2	1.5	190	1	3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000056569	Mpz	ENSMUST00000238908	ENSMUSP00000159037	TRANSLATION	protein_coding	-	-	-	312	0	2	1.5	190	1	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000056569	Mpz	ENSMUST00000070758	ENSMUSP00000066701	TRANSLATION	protein_coding	-	CCDS15479.1	1	248	0	2	1.5	190	1	3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000056569	Mpz	ENSMUST00000125565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056569	Mpz	ENSMUST00000149352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043467	Zbtb37	ENSMUST00000160056	ENSMUSP00000134769	TRANSLATION	nonsense_mediated_decay	-	-	2	504	12	2.2	12.8	136.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043467	Zbtb37	ENSMUST00000162226	ENSMUSP00000125253	TRANSLATION	protein_coding	-	CCDS15412.1	1	504	12	2.2	12.8	136.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000043467	Zbtb37	ENSMUST00000159250	ENSMUSP00000125417	TRANSLATION	protein_coding	-	CCDS15412.1	1	504	12	2.2	12.8	136.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000043467	Zbtb37	ENSMUST00000163079	ENSMUSP00000134753	TRANSLATION	nonsense_mediated_decay	-	-	2	504	12	2.2	12.8	136.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043467	Zbtb37	ENSMUST00000171748	ENSMUSP00000129965	TRANSLATION	protein_coding	-	-	5	310	0	1	2.9	94	0	-4,-5	-	-	6.848	MINOR
ENSMUSG00000043467	Zbtb37	ENSMUST00000177003	ENSMUSP00000134816	TRANSLATION	protein_coding	stop	-	2	98	0	1	0	69.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043467	Zbtb37	ENSMUST00000172044	ENSMUSP00000131576	TRANSLATION	protein_coding	-	CCDS15412.1	1	504	12	2.2	12.8	136.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000009418	Nav1	ENSMUST00000189362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009418	Nav1	ENSMUST00000040599	ENSMUSP00000043803	TRANSLATION	protein_coding	-	-	5	1875	9	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000009418	Nav1	ENSMUST00000189252	ENSMUSP00000141115	TRANSLATION	protein_coding	start/stop	-	5	223	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000009418	Nav1	ENSMUST00000112103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009418	Nav1	ENSMUST00000067414	ENSMUSP00000067241	TRANSLATION	protein_coding	-	CCDS35720.1	5	1875	9	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000009418	Nav1	ENSMUST00000190298	ENSMUSP00000140322	TRANSLATION	protein_coding	-	-	1	2098	9	0	0	0	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000009418	Nav1	ENSMUST00000187311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009418	Nav1	ENSMUST00000190130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009418	Nav1	ENSMUST00000190735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066672	Olfr417	ENSMUST00000217962	ENSMUSP00000151782	TRANSLATION	protein_coding	-	CCDS15542.1	5	309	0	0.2	3.9	153.7	7	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066672	Olfr417	ENSMUST00000220394	ENSMUSP00000151947	TRANSLATION	protein_coding	-	CCDS15542.1	5	309	0	0.2	3.9	153.7	7	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066672	Olfr417	ENSMUST00000085862	ENSMUSP00000083024	TRANSLATION	protein_coding	-	CCDS15542.1	-	309	0	0.2	3.9	153.7	7	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066877	Nck2	ENSMUST00000114744	ENSMUSP00000110392	TRANSLATION	protein_coding	start	-	5	77	0	1.75	0	51.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066877	Nck2	ENSMUST00000136648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066877	Nck2	ENSMUST00000086421	ENSMUSP00000083611	TRANSLATION	protein_coding	-	CCDS14924.1	1	380	0	4.75	6.4	233.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066877	Nck2	ENSMUST00000202540	ENSMUSP00000144224	TRANSLATION	protein_coding	stop	-	3	142	0	2.75	0	51.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066877	Nck2	ENSMUST00000187435	ENSMUSP00000140338	TRANSLATION	protein_coding	stop	-	5	21	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066877	Nck2	ENSMUST00000124817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025997	Ikzf2	ENSMUST00000027146	ENSMUSP00000027146	TRANSLATION	protein_coding	-	CCDS15026.1	1	526	22	3.368	8.8	58.7	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000025997	Ikzf2	ENSMUST00000188919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025997	Ikzf2	ENSMUST00000187184	ENSMUSP00000141075	TRANSLATION	protein_coding	-	-	5	500	18	2.618	4.8	58.7	0	-4,-5	-	-	15.297	MINOR
ENSMUSG00000025997	Ikzf2	ENSMUST00000191262	ENSMUSP00000139530	TRANSLATION	protein_coding	-	-	5	381	10	1	0	18.7	0	-4,-5	-	-	3.18	MINOR
ENSMUSG00000025997	Ikzf2	ENSMUST00000190016	ENSMUSP00000140378	TRANSLATION	protein_coding	stop	-	3	99	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025997	Ikzf2	ENSMUST00000190855	ENSMUSP00000140043	TRANSLATION	protein_coding	-	-	5	452	18	2.418	0	58.7	0	-4,-5	-	-	13.434	MINOR
ENSMUSG00000025997	Ikzf2	ENSMUST00000188110	ENSMUSP00000140069	TRANSLATION	protein_coding	-	-	5	454	14	1.818	0	40	0	-4,-5	-	-	7.65	MINOR
ENSMUSG00000025997	Ikzf2	ENSMUST00000187870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025997	Ikzf2	ENSMUST00000190771	ENSMUSP00000139543	TRANSLATION	protein_coding	-	-	5	532	22	3.368	8.8	58.7	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000058665	En1	ENSMUST00000079721	ENSMUSP00000078659	TRANSLATION	protein_coding	-	CCDS15235.1	1	401	0	1	0.5	141.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048234	Rnf149	ENSMUST00000195705	ENSMUSP00000141233	TRANSLATION	protein_coding	-	-	3	44	0	0	0	0	0	1,-4	-	-	0	MINOR
ENSMUSG00000048234	Rnf149	ENSMUST00000195136	ENSMUSP00000141667	TRANSLATION	nonsense_mediated_decay	-	-	5	150	2	1.57	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000048234	Rnf149	ENSMUST00000153381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048234	Rnf149	ENSMUST00000062525	ENSMUSP00000050388	TRANSLATION	protein_coding	-	CCDS14907.1	1	394	8	3.21	1.5	73.7	2	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000004768	Rab23	ENSMUST00000132066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000151482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000138024	ENSMUSP00000137896	TRANSLATION	nonsense_mediated_decay	-	-	1	64	12	1.14	0	47.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004768	Rab23	ENSMUST00000122822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000088287	ENSMUSP00000085625	TRANSLATION	protein_coding	-	CCDS35532.1	1	237	22	4.54	17	177.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004768	Rab23	ENSMUST00000150593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000135330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000115174	ENSMUSP00000110828	TRANSLATION	protein_coding	-	CCDS35532.1	1	237	22	4.54	17	177.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004768	Rab23	ENSMUST00000140354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004768	Rab23	ENSMUST00000195006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038599	Capn8	ENSMUST00000048941	ENSMUSP00000047164	TRANSLATION	protein_coding	-	CCDS35814.1	1	703	29	15.66	3.9	607.4	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000038599	Capn8	ENSMUST00000168514	ENSMUSP00000129549	TRANSLATION	protein_coding	-	CCDS48477.1	1	381	10	8	2.9	434.7	0	-4,-2	-	-	0.655	MINOR
ENSMUSG00000038599	Capn8	ENSMUST00000192671	ENSMUSP00000141275	TRANSLATION	nonsense_mediated_decay	-	-	1	690	26	13.5	0	607.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038599	Capn8	ENSMUST00000193260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114582	3110040M04Rik	ENSMUST00000224012	ENSMUSP00000153442	TRANSLATION	protein_coding	-	-	-	300	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037434	Slc30a1	ENSMUST00000161756	ENSMUSP00000124176	TRANSLATION	protein_coding	start	-	3	122	0	0	0	32	2	0,-4	-	-	-1	MINOR
ENSMUSG00000037434	Slc30a1	ENSMUST00000044954	ENSMUSP00000042410	TRANSLATION	protein_coding	-	CCDS15625.1	1	503	0	0.4	1.5	139.4	5	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026083	Eif5b	ENSMUST00000193151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026083	Eif5b	ENSMUST00000193806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026083	Eif5b	ENSMUST00000027252	ENSMUSP00000027252	TRANSLATION	protein_coding	-	CCDS35544.1	2	1216	14	13.36	1.5	226	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026083	Eif5b	ENSMUST00000192548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026083	Eif5b	ENSMUST00000195664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038576	Susd4	ENSMUST00000085724	ENSMUSP00000082873	TRANSLATION	protein_coding	-	CCDS15590.1	1	490	0	3.3084	3.9	123.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000038576	Susd4	ENSMUST00000153348	ENSMUSP00000119488	TRANSLATION	protein_coding	-	CCDS15590.1	5	490	0	3.3084	3.9	123.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000038576	Susd4	ENSMUST00000155229	ENSMUSP00000142330	TRANSLATION	protein_coding	stop	-	3	148	0	1.4884	0	26.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038576	Susd4	ENSMUST00000194981	ENSMUSP00000141475	TRANSLATION	protein_coding	stop	-	5	113	0	0.64	0	23.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038576	Susd4	ENSMUST00000193660	ENSMUSP00000141794	TRANSLATION	protein_coding	stop	-	5	104	0	0	0	22.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026023	Cdk15	ENSMUST00000162487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026023	Cdk15	ENSMUST00000114248	ENSMUSP00000109886	TRANSLATION	protein_coding	-	CCDS48273.1	1	433	18	8.14	1.5	228.1	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000026023	Cdk15	ENSMUST00000160662	ENSMUSP00000124680	TRANSLATION	protein_coding	-	-	5	435	18	8.14	1.5	228.1	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000026023	Cdk15	ENSMUST00000162906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001138	Cnnm3	ENSMUST00000195264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001138	Cnnm3	ENSMUST00000154225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001138	Cnnm3	ENSMUST00000001166	ENSMUSP00000001166	TRANSLATION	protein_coding	-	CCDS14880.1	1	713	14	1.6	1.5	20.6	3	2,-2	-	-	18	PRINCIPAL:4
ENSMUSG00000001138	Cnnm3	ENSMUST00000097776	ENSMUSP00000095383	TRANSLATION	protein_coding	-	CCDS14881.1	1	708	14	1.6	1.5	20.6	3	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000001138	Cnnm3	ENSMUST00000135100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073676	Hspe1	ENSMUST00000075242	ENSMUSP00000074724	TRANSLATION	protein_coding	-	CCDS35570.1	1	102	0	2.5	17.5	105.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000073676	Hspe1	ENSMUST00000134628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026070	Il18r1	ENSMUST00000195684	ENSMUSP00000142070	TRANSLATION	protein_coding	-	CCDS35549.1	5	537	0	7.56	1.5	154.6	2	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000026070	Il18r1	ENSMUST00000108044	ENSMUSP00000103679	TRANSLATION	protein_coding	-	CCDS35549.1	5	537	0	7.56	1.5	154.6	2	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000026070	Il18r1	ENSMUST00000193793	ENSMUSP00000141464	TRANSLATION	protein_coding	-	-	1	267	0	4.9	0	29.1	0	-1,-4	-	-	0.678	MINOR
ENSMUSG00000026070	Il18r1	ENSMUST00000193391	ENSMUSP00000141695	TRANSLATION	protein_coding	-	CCDS48247.1	1	372	0	6.3	0.5	29.1	2	-1,-4	-	-	3.48	MINOR
ENSMUSG00000026070	Il18r1	ENSMUST00000167723	ENSMUSP00000128277	TRANSLATION	protein_coding	-	CCDS48247.1	1	372	0	6.3	0.5	29.1	2	-1,-4	-	-	3.48	MINOR
ENSMUSG00000026070	Il18r1	ENSMUST00000087983	ENSMUSP00000085298	TRANSLATION	protein_coding	-	CCDS35549.1	5	537	0	7.56	1.5	154.6	2	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000079436	Kcnj13	ENSMUST00000174179	ENSMUSP00000133524	TRANSLATION	protein_coding	-	-	5	86	0	0.6	0	51.6	1	-4,-2	-	-	1.518	MINOR
ENSMUSG00000079436	Kcnj13	ENSMUST00000113212	ENSMUSP00000108838	TRANSLATION	protein_coding	-	CCDS35653.1	2	360	0	2.37	8.8	304	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000096141	Dnah7a	ENSMUST00000094964	ENSMUSP00000092571	TRANSLATION	protein_coding	-	CCDS56629.1	5	4024	64	29.24	0.5	2671.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096141	Dnah7a	ENSMUST00000189677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026458	Ppfia4	ENSMUST00000189361	ENSMUSP00000139833	TRANSLATION	protein_coding	-	-	5	1184	0	7.481	3.9	112.3	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000026458	Ppfia4	ENSMUST00000189862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026458	Ppfia4	ENSMUST00000168515	ENSMUSP00000128314	TRANSLATION	protein_coding	-	CCDS48369.1	1	1187	0	7.481	2.9	112.3	0	-4,-5	-	-	12.655	PRINCIPAL:2
ENSMUSG00000026458	Ppfia4	ENSMUST00000186730	ENSMUSP00000139800	TRANSLATION	protein_coding	start	-	5	892	0	7.25	0	112.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026458	Ppfia4	ENSMUST00000186964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026458	Ppfia4	ENSMUST00000186553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000195268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000192293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000192252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000191782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042901	Aida	ENSMUST00000193625	ENSMUSP00000141649	TRANSLATION	protein_coding	-	-	3	223	0	5.75	0	249.4	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000042901	Aida	ENSMUST00000193359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000193959	ENSMUSP00000142129	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0.75	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042901	Aida	ENSMUST00000194652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042901	Aida	ENSMUST00000109166	ENSMUSP00000104795	TRANSLATION	protein_coding	-	CCDS56663.1	1	305	0	7.75	4.7	354.7	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000042268	Slc26a9	ENSMUST00000147800	ENSMUSP00000122075	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	74.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042268	Slc26a9	ENSMUST00000130544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042268	Slc26a9	ENSMUST00000186122	ENSMUSP00000141171	TRANSLATION	nonsense_mediated_decay	-	-	5	478	0	0	0	253.2	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000042268	Slc26a9	ENSMUST00000049027	ENSMUSP00000036916	TRANSLATION	protein_coding	-	CCDS15273.1	1	790	0	1.5	2.7	401.3	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073609	D2hgdh	ENSMUST00000112881	ENSMUSP00000108502	TRANSLATION	protein_coding	-	CCDS78658.1	1	557	29	6.684	1.5	311	0	0,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000073609	D2hgdh	ENSMUST00000149397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073609	D2hgdh	ENSMUST00000097633	ENSMUSP00000095235	TRANSLATION	protein_coding	-	CCDS15196.1	1	535	29	6.684	1.5	311	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000073609	D2hgdh	ENSMUST00000189154	ENSMUSP00000140506	TRANSLATION	protein_coding	stop	-	3	219	12	2.3	0	39.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000073609	D2hgdh	ENSMUST00000188532	ENSMUSP00000139812	TRANSLATION	protein_coding	start/stop	-	5	77	5	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073609	D2hgdh	ENSMUST00000141701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073609	D2hgdh	ENSMUST00000187321	ENSMUSP00000140181	TRANSLATION	protein_coding	stop	-	3	50	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000073609	D2hgdh	ENSMUST00000186783	ENSMUSP00000139770	TRANSLATION	nonsense_mediated_decay	start	-	1	37	5	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051951	Xkr4	ENSMUST00000159265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051951	Xkr4	ENSMUST00000162897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051951	Xkr4	ENSMUST00000070533	ENSMUSP00000070648	TRANSLATION	protein_coding	-	CCDS14803.1	1	647	0	0	0.5	418.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047216	Cdh19	ENSMUST00000187555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047216	Cdh19	ENSMUST00000094626	ENSMUSP00000092210	TRANSLATION	protein_coding	-	CCDS35687.1	1	770	44	8.44	1.5	349.7	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000026171	Rnf25	ENSMUST00000136078	ENSMUSP00000117692	TRANSLATION	protein_coding	start/stop	-	5	123	0	3.59	0	66.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026171	Rnf25	ENSMUST00000127938	ENSMUSP00000116973	TRANSLATION	protein_coding	stop	-	5	108	8	2.96	0	28.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026171	Rnf25	ENSMUST00000154874	ENSMUSP00000120646	TRANSLATION	protein_coding	stop	-	3	102	0	3.51	0	48.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026171	Rnf25	ENSMUST00000113721	ENSMUSP00000109350	TRANSLATION	protein_coding	-	CCDS78620.1	1	455	8	7.336	5.1	94.9	0	-4,-5	-	-	19.598	ALTERNATIVE:1
ENSMUSG00000026171	Rnf25	ENSMUST00000027357	ENSMUSP00000027357	TRANSLATION	protein_coding	-	CCDS15052.1	1	456	8	7.536	5.1	94.9	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000026171	Rnf25	ENSMUST00000132081	ENSMUSP00000115350	TRANSLATION	protein_coding	stop	-	5	25	0	0.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026171	Rnf25	ENSMUST00000128491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026171	Rnf25	ENSMUST00000149649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026171	Rnf25	ENSMUST00000135140	ENSMUSP00000138040	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	1.226	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026171	Rnf25	ENSMUST00000151003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045091	Aqp12	ENSMUST00000059676	ENSMUSP00000060622	TRANSLATION	protein_coding	-	CCDS15183.1	1	290	0	0	1.5	34.2	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000113880	A030005L19Rik	ENSMUST00000220768	ENSMUSP00000152156	TRANSLATION	protein_coding	-	-	-	113	0	0	0	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000067006	Serpinb5	ENSMUST00000112729	ENSMUSP00000108349	TRANSLATION	protein_coding	-	CCDS35684.1	1	375	0	6.25	9.5	347.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000067006	Serpinb5	ENSMUST00000112730	ENSMUSP00000108350	TRANSLATION	protein_coding	-	CCDS35684.1	1	375	0	6.25	9.5	347.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000067006	Serpinb5	ENSMUST00000188745	ENSMUSP00000140264	TRANSLATION	protein_coding	stop	-	3	74	0	1.5	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067006	Serpinb5	ENSMUST00000086701	ENSMUSP00000083908	TRANSLATION	protein_coding	-	CCDS35684.1	1	375	0	6.25	9.5	347.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025911	Adhfe1	ENSMUST00000027044	ENSMUSP00000137782	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025911	Adhfe1	ENSMUST00000186467	ENSMUSP00000140861	TRANSLATION	nonsense_mediated_decay	start	-	5	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025911	Adhfe1	ENSMUST00000130927	ENSMUSP00000137817	TRANSLATION	nonsense_mediated_decay	-	-	3	67	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025911	Adhfe1	ENSMUST00000190654	ENSMUSP00000140592	TRANSLATION	nonsense_mediated_decay	start	-	1	457	31	7.514	0	344.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025911	Adhfe1	ENSMUST00000144177	ENSMUSP00000116627	TRANSLATION	protein_coding	-	CCDS14812.1	1	465	31	7.514	4.9	344.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000060298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000097513	ENSMUSP00000137410	TRANSLATION	protein_coding	-	CCDS48410.1	-	99	0	0	7.6	0	1	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000168250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000163892	ENSMUSP00000156718	TRANSLATION	protein_coding	-	CCDS48410.1	1	99	0	0	7.6	0	1	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000165923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090394	4930523C07Rik	ENSMUST00000191933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060519	Tor3a	ENSMUST00000156861	ENSMUSP00000140808	TRANSLATION	nonsense_mediated_decay	-	-	2	115	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000060519	Tor3a	ENSMUST00000150557	ENSMUSP00000137828	TRANSLATION	nonsense_mediated_decay	-	-	2	245	10	1	0	163.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000060519	Tor3a	ENSMUST00000154353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060519	Tor3a	ENSMUST00000190607	ENSMUSP00000140129	TRANSLATION	protein_coding	-	-	3	133	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000060519	Tor3a	ENSMUST00000079625	ENSMUSP00000078572	TRANSLATION	protein_coding	-	CCDS15394.1	1	385	12	3.65	0.5	194.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000060519	Tor3a	ENSMUST00000152604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060519	Tor3a	ENSMUST00000122242	ENSMUSP00000113984	TRANSLATION	nonsense_mediated_decay	-	-	1	385	12	3.65	0.5	194.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000060519	Tor3a	ENSMUST00000188964	ENSMUSP00000140079	TRANSLATION	protein_coding	-	CCDS15394.1	1	385	12	3.65	0.5	194.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000038793	Lefty1	ENSMUST00000132087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038793	Lefty1	ENSMUST00000037361	ENSMUSP00000041427	TRANSLATION	protein_coding	-	CCDS15577.1	1	368	0	0.42	1.5	80.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039323	Igfbp2	ENSMUST00000047328	ENSMUSP00000046610	TRANSLATION	protein_coding	-	CCDS15036.1	1	305	0	2.8	0.5	114.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000039323	Igfbp2	ENSMUST00000155703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039323	Igfbp2	ENSMUST00000120564	ENSMUSP00000112706	TRANSLATION	protein_coding	-	CCDS78613.1	3	158	0	2	4.9	68.1	0	-4,-7	-	-	8.524	MINOR
ENSMUSG00000016181	Utp25	ENSMUST00000193460	ENSMUSP00000142059	TRANSLATION	protein_coding	start	-	3	225	0	0	0	276.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016181	Utp25	ENSMUST00000193070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016181	Utp25	ENSMUST00000195848	ENSMUSP00000141950	TRANSLATION	nonsense_mediated_decay	-	-	2	52	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016181	Utp25	ENSMUST00000195291	ENSMUSP00000141676	TRANSLATION	nonsense_mediated_decay	-	-	1	640	0	0	0	414	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016181	Utp25	ENSMUST00000194124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016181	Utp25	ENSMUST00000194412	ENSMUSP00000142099	TRANSLATION	protein_coding	start	-	5	93	0	0	0	53.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016181	Utp25	ENSMUST00000191928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016181	Utp25	ENSMUST00000085555	ENSMUSP00000082691	TRANSLATION	protein_coding	-	CCDS15631.1	1	768	0	0	0.5	651	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000016181	Utp25	ENSMUST00000194335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070504	Fcrl6	ENSMUST00000193431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070504	Fcrl6	ENSMUST00000193566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070504	Fcrl6	ENSMUST00000094303	ENSMUSP00000091861	TRANSLATION	protein_coding	-	CCDS48448.1	5	268	0	1.006	0.5	36.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000014980	Tsen15	ENSMUST00000163027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014980	Tsen15	ENSMUST00000188105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014980	Tsen15	ENSMUST00000162371	ENSMUSP00000124391	TRANSLATION	protein_coding	-	-	5	128	0	2.482	1	33.4	0	-4,-5	-	-	6.732	MINOR
ENSMUSG00000014980	Tsen15	ENSMUST00000159717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014980	Tsen15	ENSMUST00000161717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014980	Tsen15	ENSMUST00000015124	ENSMUSP00000015124	TRANSLATION	protein_coding	-	CCDS15363.1	1	168	0	3.35	5.1	81.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000014980	Tsen15	ENSMUST00000159270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026042	Col5a2	ENSMUST00000086430	ENSMUSP00000083620	TRANSLATION	protein_coding	-	CCDS35555.1	1	1497	4	32.95	7.5	557.4	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000026042	Col5a2	ENSMUST00000131535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026042	Col5a2	ENSMUST00000150143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026042	Col5a2	ENSMUST00000134681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026126	Ptpn18	ENSMUST00000190122	ENSMUSP00000139885	TRANSLATION	protein_coding	stop	-	5	289	12	8.58	0	257.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026126	Ptpn18	ENSMUST00000186252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026126	Ptpn18	ENSMUST00000188972	ENSMUSP00000140436	TRANSLATION	protein_coding	-	-	1	85	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026126	Ptpn18	ENSMUST00000185610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026126	Ptpn18	ENSMUST00000188019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026126	Ptpn18	ENSMUST00000188884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026126	Ptpn18	ENSMUST00000027302	ENSMUSP00000027302	TRANSLATION	protein_coding	-	CCDS14867.1	1	453	12	9.33	1.5	257.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026421	Csrp1	ENSMUST00000027677	ENSMUSP00000027677	TRANSLATION	protein_coding	-	CCDS15320.1	1	193	16	4.75	19.5	108.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026421	Csrp1	ENSMUST00000097561	ENSMUSP00000095169	TRANSLATION	protein_coding	-	CCDS15320.1	1	193	16	4.75	19.5	108.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000079470	Utp14b	ENSMUST00000053760	ENSMUSP00000052149	TRANSLATION	protein_coding	-	CCDS15086.1	1	780	0	0	0.5	533.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079470	Utp14b	ENSMUST00000151622	ENSMUSP00000121391	TRANSLATION	protein_coding	-	CCDS15086.1	1	780	0	0	0.5	533.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000006411	Nectin4	ENSMUST00000094325	ENSMUSP00000091883	TRANSLATION	protein_coding	-	CCDS48442.1	1	483	0	4.2	5.1	147.9	2	1,-4	-	-	13.893	MINOR
ENSMUSG00000006411	Nectin4	ENSMUST00000006578	ENSMUSP00000006578	TRANSLATION	protein_coding	-	CCDS15493.1	1	508	0	4.2	7.5	147.9	2	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000006411	Nectin4	ENSMUST00000111286	ENSMUSP00000106917	TRANSLATION	protein_coding	-	CCDS15493.1	1	508	0	4.2	7.5	147.9	2	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000026069	Il1rl1	ENSMUST00000174335	ENSMUSP00000134351	TRANSLATION	protein_coding	-	CCDS56626.1	1	337	0	6.948	1.5	30.5	0	1,-3	-	-	3.438	MINOR
ENSMUSG00000026069	Il1rl1	ENSMUST00000173514	ENSMUSP00000133784	TRANSLATION	protein_coding	-	CCDS56626.1	1	337	0	6.948	1.5	30.5	0	1,-3	-	-	3.438	MINOR
ENSMUSG00000026069	Il1rl1	ENSMUST00000173881	ENSMUSP00000134225	TRANSLATION	protein_coding	stop	-	2	65	0	1	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000026069	Il1rl1	ENSMUST00000097772	ENSMUSP00000095379	TRANSLATION	protein_coding	-	CCDS35548.1	1	567	0	8.23	1.5	202.2	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026069	Il1rl1	ENSMUST00000053043	ENSMUSP00000054914	TRANSLATION	protein_coding	-	CCDS35548.1	1	567	0	8.23	1.5	202.2	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000073601	Serpinb3c	ENSMUST00000027565	ENSMUSP00000027565	TRANSLATION	protein_coding	-	CCDS35685.1	1	386	0	6.35	1.5	436.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040848	Sft2d2	ENSMUST00000192565	ENSMUSP00000142241	TRANSLATION	nonsense_mediated_decay	-	-	3	114	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000040848	Sft2d2	ENSMUST00000043338	ENSMUSP00000043537	TRANSLATION	protein_coding	-	CCDS15440.1	1	159	0	0	15.8	121.4	5	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000040848	Sft2d2	ENSMUST00000192185	ENSMUSP00000141801	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026572	Tbx19	ENSMUST00000161777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026572	Tbx19	ENSMUST00000027859	ENSMUSP00000027859	TRANSLATION	protein_coding	-	CCDS15439.1	1	446	0	3.55	6.3	241.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026572	Tbx19	ENSMUST00000161144	ENSMUSP00000123909	TRANSLATION	protein_coding	start	-	5	318	0	2.75	0	195.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026572	Tbx19	ENSMUST00000160350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026427	Eif2d	ENSMUST00000153651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026427	Eif2d	ENSMUST00000068805	ENSMUSP00000063894	TRANSLATION	protein_coding	-	CCDS48354.1	1	570	0	2.53	1.5	60.4	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000026427	Eif2d	ENSMUST00000149119	ENSMUSP00000137887	TRANSLATION	nonsense_mediated_decay	-	-	1	176	0	2.53	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026427	Eif2d	ENSMUST00000131855	ENSMUSP00000137678	TRANSLATION	nonsense_mediated_decay	-	-	1	587	0	2.53	0.5	56.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026427	Eif2d	ENSMUST00000112446	ENSMUSP00000108065	TRANSLATION	protein_coding	-	CCDS35702.1	1	552	0	2.53	0.5	56.1	0	-4,-1	-	-	11.574	PRINCIPAL:3
ENSMUSG00000026427	Eif2d	ENSMUST00000068791	ENSMUSP00000067461	TRANSLATION	protein_coding	-	-	1	453	0	2.53	0	0	0	-4,-1	-	-	6	MINOR
ENSMUSG00000026427	Eif2d	ENSMUST00000139468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026427	Eif2d	ENSMUST00000151874	ENSMUSP00000138061	TRANSLATION	nonsense_mediated_decay	-	-	5	570	0	2.53	1.5	60.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041396	Mettl18	ENSMUST00000111490	ENSMUSP00000107116	TRANSLATION	protein_coding	-	CCDS15431.1	1	362	17	0.8	1.5	22.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041396	Mettl18	ENSMUST00000045694	ENSMUSP00000048636	TRANSLATION	protein_coding	-	CCDS15431.1	1	362	17	0.8	1.5	22.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000101303	B020011L13Rik	ENSMUST00000188801	ENSMUSP00000140211	TRANSLATION	protein_coding	-	-	3	412	46	1.6	0	359.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025902	Sox17	ENSMUST00000027035	ENSMUSP00000027035	TRANSLATION	protein_coding	-	CCDS14805.1	1	419	0	2.35	0.5	162.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025902	Sox17	ENSMUST00000191939	ENSMUSP00000142154	TRANSLATION	protein_coding	stop	-	1	170	0	2.35	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025902	Sox17	ENSMUST00000192650	ENSMUSP00000142116	TRANSLATION	protein_coding	-	CCDS78539.1	1	354	0	1.91	0.5	105.6	0	-4,-5	-	-	7.464	MINOR
ENSMUSG00000025902	Sox17	ENSMUST00000116652	ENSMUSP00000112351	TRANSLATION	protein_coding	-	CCDS14805.1	1	419	0	2.35	0.5	162.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025902	Sox17	ENSMUST00000191647	ENSMUSP00000142204	TRANSLATION	protein_coding	stop	-	5	107	0	1.91	0	34.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025902	Sox17	ENSMUST00000192913	ENSMUSP00000141674	TRANSLATION	protein_coding	stop	-	5	169	0	2.35	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025902	Sox17	ENSMUST00000192505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025902	Sox17	ENSMUST00000195555	ENSMUSP00000141894	TRANSLATION	protein_coding	-	CCDS78538.1	5	291	0	0.8	0.5	70.8	0	-4,-7	-	-	2.538	MINOR
ENSMUSG00000050069	Grem2	ENSMUST00000055294	ENSMUSP00000049640	TRANSLATION	protein_coding	-	CCDS15545.1	1	168	0	1	6.4	139.4	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026390	Marco	ENSMUST00000027639	ENSMUSP00000027639	TRANSLATION	protein_coding	-	CCDS15234.1	1	518	5	8.8	1.5	133.9	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000026390	Marco	ENSMUST00000186432	ENSMUSP00000140948	TRANSLATION	protein_coding	start/stop	-	3	123	0	2	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004880	Lbr	ENSMUST00000191878	ENSMUSP00000142133	TRANSLATION	protein_coding	stop	-	5	122	0	1.8	0	111.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004880	Lbr	ENSMUST00000193028	ENSMUSP00000141671	TRANSLATION	protein_coding	stop	-	5	27	0	0.75	0	52.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004880	Lbr	ENSMUST00000195299	ENSMUSP00000142167	TRANSLATION	protein_coding	stop	-	2	72	0	1.8	0	111.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004880	Lbr	ENSMUST00000005003	ENSMUSP00000005003	TRANSLATION	protein_coding	-	CCDS15584.1	1	626	0	8.44	0.5	636.1	9	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000004880	Lbr	ENSMUST00000193030	ENSMUSP00000141335	TRANSLATION	protein_coding	stop	-	3	132	0	1.8	0	111.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004880	Lbr	ENSMUST00000194302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004880	Lbr	ENSMUST00000192075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004880	Lbr	ENSMUST00000194415	ENSMUSP00000142232	TRANSLATION	protein_coding	start/stop	-	3	202	0	2.76	0	162.2	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000026004	Kansl1l	ENSMUST00000068168	ENSMUSP00000063843	TRANSLATION	protein_coding	-	CCDS35603.1	1	947	0	0	1.5	84.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026004	Kansl1l	ENSMUST00000189846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026004	Kansl1l	ENSMUST00000129190	ENSMUSP00000118603	TRANSLATION	protein_coding	start	-	1	647	0	0	0	84.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026004	Kansl1l	ENSMUST00000132960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026004	Kansl1l	ENSMUST00000113987	ENSMUSP00000109620	TRANSLATION	protein_coding	-	-	1	700	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053483	Usp21	ENSMUST00000127101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000144393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000147176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000111305	ENSMUSP00000106936	TRANSLATION	protein_coding	-	CCDS35774.1	5	566	8	9.75	7.6	207.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000053483	Usp21	ENSMUST00000126729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000065941	ENSMUSP00000064002	TRANSLATION	protein_coding	-	CCDS35774.1	1	566	8	9.75	7.6	207.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000053483	Usp21	ENSMUST00000149187	ENSMUSP00000120161	TRANSLATION	nonsense_mediated_decay	-	-	2	451	4	6.55	0	111	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053483	Usp21	ENSMUST00000174720	ENSMUSP00000133362	TRANSLATION	protein_coding	start/stop	-	3	162	2	2.75	0	59	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053483	Usp21	ENSMUST00000111306	ENSMUSP00000106938	TRANSLATION	protein_coding	-	-	1	569	8	9.75	6.3	197.3	0	-4,-7	-	-	19.809	MINOR
ENSMUSG00000053483	Usp21	ENSMUST00000142656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000153164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053483	Usp21	ENSMUST00000126557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046486	Olfr231	ENSMUST00000063030	ENSMUSP00000059596	TRANSLATION	protein_coding	-	CCDS48456.1	-	307	0	0.42	1.5	210.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046486	Olfr231	ENSMUST00000214446	ENSMUSP00000151011	TRANSLATION	protein_coding	-	CCDS48456.1	5	307	0	0.42	1.5	210.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025930	Msc	ENSMUST00000188982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025930	Msc	ENSMUST00000190719	ENSMUSP00000140741	TRANSLATION	protein_coding	start	-	3	52	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025930	Msc	ENSMUST00000027062	ENSMUSP00000027062	TRANSLATION	protein_coding	-	CCDS14825.1	1	201	0	1.2	0.5	58.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025930	Msc	ENSMUST00000190471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052759	Gpr25	ENSMUST00000086395	ENSMUSP00000083583	TRANSLATION	protein_coding	-	CCDS48381.1	-	358	0	0.48	3.9	135.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026238	Ptma	ENSMUST00000045897	ENSMUSP00000044188	TRANSLATION	protein_coding	-	CCDS35649.1	1	111	0	0	13.5	124.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026238	Ptma	ENSMUST00000188533	ENSMUSP00000139849	TRANSLATION	protein_coding	-	-	3	98	0	0	0	102.7	0	-4,-5	-	-	4.716	MINOR
ENSMUSG00000026238	Ptma	ENSMUST00000186255	ENSMUSP00000139690	TRANSLATION	protein_coding	-	-	2	58	0	0	0	60.1	0	-4,-5	-	-	2.16	MINOR
ENSMUSG00000026238	Ptma	ENSMUST00000188699	ENSMUSP00000140270	TRANSLATION	protein_coding	stop	-	5	145	0	0	0	50.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026238	Ptma	ENSMUST00000186932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100305	Gm28360	ENSMUST00000187455	ENSMUSP00000140444	TRANSLATION	protein_coding	-	-	5	190	15	2	0	149.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000055067	Smyd3	ENSMUST00000194237	ENSMUSP00000141631	TRANSLATION	protein_coding	-	-	2	72	6	1	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000055067	Smyd3	ENSMUST00000128302	ENSMUSP00000117410	TRANSLATION	protein_coding	-	CCDS15560.1	1	428	28	11.25	7.5	98.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000055067	Smyd3	ENSMUST00000131684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055067	Smyd3	ENSMUST00000068437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055067	Smyd3	ENSMUST00000111134	ENSMUSP00000106764	TRANSLATION	protein_coding	-	-	2	182	14	4.5	0	39.6	0	-4,-7	-	-	2.418	MINOR
ENSMUSG00000055067	Smyd3	ENSMUST00000125756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055067	Smyd3	ENSMUST00000129393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026725	Tnn	ENSMUST00000039178	ENSMUSP00000039452	TRANSLATION	protein_coding	-	CCDS15404.1	1	1560	7	6.2	1.5	857.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026725	Tnn	ENSMUST00000131919	ENSMUSP00000115685	TRANSLATION	protein_coding	-	-	5	1296	7	6.2	2.4	697.6	0	3,-2	-	-	12	MINOR
ENSMUSG00000039395	Mreg	ENSMUST00000048860	ENSMUSP00000041878	TRANSLATION	protein_coding	-	CCDS15032.1	1	214	0	0	7.6	236	0	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000049690	Nckap5	ENSMUST00000094610	ENSMUSP00000092193	TRANSLATION	protein_coding	-	-	3	202	0	0	0	131.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000049690	Nckap5	ENSMUST00000161954	ENSMUSP00000125624	TRANSLATION	protein_coding	-	CCDS48345.1	1	1841	0	0	0.5	385.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049690	Nckap5	ENSMUST00000162647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049690	Nckap5	ENSMUST00000160693	ENSMUSP00000123975	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049690	Nckap5	ENSMUST00000162664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049690	Nckap5	ENSMUST00000112583	ENSMUSP00000108202	TRANSLATION	protein_coding	-	CCDS35695.1	5	1909	0	0	1.5	385.5	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000049690	Nckap5	ENSMUST00000160736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049690	Nckap5	ENSMUST00000162877	ENSMUSP00000124748	TRANSLATION	protein_coding	-	-	1	338	0	0	0	120.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000049690	Nckap5	ENSMUST00000094609	ENSMUSP00000092192	TRANSLATION	protein_coding	-	CCDS48346.1	5	406	0	0	0.5	120.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000049690	Nckap5	ENSMUST00000162646	ENSMUSP00000123936	TRANSLATION	protein_coding	stop	-	3	188	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049690	Nckap5	ENSMUST00000159934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049690	Nckap5	ENSMUST00000057846	ENSMUSP00000062229	TRANSLATION	protein_coding	-	-	5	1777	0	0	0	385.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000003464	Pex19	ENSMUST00000075895	ENSMUSP00000075289	TRANSLATION	protein_coding	-	CCDS15508.1	1	299	0	4.8	4.1	185.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000003464	Pex19	ENSMUST00000147799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003464	Pex19	ENSMUST00000133081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003464	Pex19	ENSMUST00000111252	ENSMUSP00000106883	TRANSLATION	protein_coding	-	CCDS48445.1	1	207	0	4	0.5	172.7	0	-4,-5	-	-	9.612	MINOR
ENSMUSG00000003464	Pex19	ENSMUST00000127662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003464	Pex19	ENSMUST00000133546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040124	Gorab	ENSMUST00000186402	ENSMUSP00000140320	TRANSLATION	nonsense_mediated_decay	-	-	1	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040124	Gorab	ENSMUST00000045138	ENSMUSP00000036253	TRANSLATION	protein_coding	-	CCDS15429.1	1	368	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000040124	Gorab	ENSMUST00000185299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013275	Slc41a1	ENSMUST00000146360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013275	Slc41a1	ENSMUST00000132585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013275	Slc41a1	ENSMUST00000086559	ENSMUSP00000083747	TRANSLATION	protein_coding	-	CCDS15275.1	1	512	0	0	8.8	193.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000048480	Cxcr1	ENSMUST00000190313	ENSMUSP00000139555	TRANSLATION	protein_coding	-	CCDS15041.1	-	351	0	1	1.5	170.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048480	Cxcr1	ENSMUST00000053389	ENSMUSP00000049714	TRANSLATION	protein_coding	-	CCDS15041.1	1	351	0	1	1.5	170.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026442	Nfasc	ENSMUST00000188307	ENSMUSP00000139520	TRANSLATION	protein_coding	-	-	1	899	0	16.57	0.5	362.9	0	4,-1	-	-	1.02	MINOR
ENSMUSG00000026442	Nfasc	ENSMUST00000186539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026442	Nfasc	ENSMUST00000189219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026442	Nfasc	ENSMUST00000163770	ENSMUSP00000132979	TRANSLATION	protein_coding	-	CCDS48359.1	5	1174	0	18.73	3.9	520.9	3	4,-1	-	-	10.498	MINOR
ENSMUSG00000026442	Nfasc	ENSMUST00000094569	ENSMUSP00000092148	TRANSLATION	protein_coding	-	CCDS35707.1	1	1240	0	17.26	3.9	523	3	4,-1	-	-	7.684	MINOR
ENSMUSG00000026442	Nfasc	ENSMUST00000191294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026442	Nfasc	ENSMUST00000186330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026442	Nfasc	ENSMUST00000187861	ENSMUSP00000139955	TRANSLATION	protein_coding	-	-	5	1347	0	19.06	1.2	551.6	3	4,-1	-	-	12.069	PRINCIPAL:1
ENSMUSG00000026442	Nfasc	ENSMUST00000043189	ENSMUSP00000035454	TRANSLATION	protein_coding	-	CCDS48358.1	1	1157	0	18.43	2.7	520.9	3	4,-1	-	-	9.484	MINOR
ENSMUSG00000026442	Nfasc	ENSMUST00000186389	ENSMUSP00000140480	TRANSLATION	protein_coding	start/stop	-	5	1159	0	18.43	0	520.9	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000009633	G0s2	ENSMUST00000009777	ENSMUSP00000009777	TRANSLATION	protein_coding	-	CCDS15636.1	1	103	0	0	3.9	144.7	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000041642	Kif21b	ENSMUST00000130864	ENSMUSP00000114297	TRANSLATION	nonsense_mediated_decay	-	-	1	1639	11	6.24	2.4	407.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041642	Kif21b	ENSMUST00000122892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041642	Kif21b	ENSMUST00000165333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041642	Kif21b	ENSMUST00000127624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041642	Kif21b	ENSMUST00000075164	ENSMUSP00000074661	TRANSLATION	protein_coding	-	CCDS15324.1	2	1624	11	6.24	4.1	403.3	0	-4,-6	-	-	18.766	PRINCIPAL:1
ENSMUSG00000041642	Kif21b	ENSMUST00000171381	ENSMUSP00000131815	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033774	Npbwr1	ENSMUST00000044180	ENSMUSP00000046233	TRANSLATION	protein_coding	-	CCDS48214.1	-	329	0	0.8	1.5	162.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041757	Plekha6	ENSMUST00000190186	ENSMUSP00000139584	TRANSLATION	protein_coding	start	-	1	901	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000212142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041757	Plekha6	ENSMUST00000186917	ENSMUSP00000139794	TRANSLATION	protein_coding	-	CCDS48361.1	1	1069	11	4.02	1.7	73.1	0	-4,-2	-	-	14.706	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000212252	ENSMUSP00000148746	TRANSLATION	protein_coding	stop	-	5	302	11	5.51	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000105082	ENSMUSP00000100703	TRANSLATION	protein_coding	-	CCDS48361.1	1	1069	11	4.02	1.7	73.1	0	-4,-2	-	-	14.706	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000190694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041757	Plekha6	ENSMUST00000187299	ENSMUSP00000139958	TRANSLATION	protein_coding	start/stop	-	5	122	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000189598	ENSMUSP00000139613	TRANSLATION	protein_coding	start/stop	-	3	175	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000239123	ENSMUSP00000158980	TRANSLATION	protein_coding	stop	-	-	135	9	2.2	0	29.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041757	Plekha6	ENSMUST00000190884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041757	Plekha6	ENSMUST00000187285	ENSMUSP00000140558	TRANSLATION	protein_coding	-	-	5	1048	11	3.75	2.4	77.1	0	-4,-2	-	-	14.478	ALTERNATIVE:2
ENSMUSG00000041757	Plekha6	ENSMUST00000038295	ENSMUSP00000048214	TRANSLATION	protein_coding	-	CCDS15292.1	1	1173	11	3.75	1.7	77.1	0	-4,-2	-	-	14.478	PRINCIPAL:2
ENSMUSG00000041757	Plekha6	ENSMUST00000190208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026471	Mr1	ENSMUST00000194612	ENSMUSP00000142195	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0.816	0	0	0	2,2	-	-	-1	MINOR
ENSMUSG00000026471	Mr1	ENSMUST00000195579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026471	Mr1	ENSMUST00000191773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026471	Mr1	ENSMUST00000192410	ENSMUSP00000141476	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	1.816	0	57	0	2,-3	-	-	-1	MINOR
ENSMUSG00000026471	Mr1	ENSMUST00000027744	ENSMUSP00000027744	TRANSLATION	protein_coding	-	CCDS15383.1	1	341	0	4.83	1.5	250.2	0	2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000032649	Colgalt2	ENSMUST00000044311	ENSMUSP00000037532	TRANSLATION	protein_coding	-	CCDS15364.1	1	625	0	0	1.5	195.3	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032649	Colgalt2	ENSMUST00000127586	ENSMUSP00000119210	TRANSLATION	nonsense_mediated_decay	-	-	1	469	0	0	0	182.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026385	Dbi	ENSMUST00000132118	ENSMUSP00000138014	TRANSLATION	nonsense_mediated_decay	-	-	5	77	10	1.85	0	43.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026385	Dbi	ENSMUST00000027634	ENSMUSP00000027634	TRANSLATION	protein_coding	-	CCDS15230.1	1	87	12	2.75	21.5	104.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026385	Dbi	ENSMUST00000151708	ENSMUSP00000114705	TRANSLATION	protein_coding	-	CCDS15231.1	1	135	12	2.75	0.5	101.8	0	-4,-2	-	-	17.862	MINOR
ENSMUSG00000026385	Dbi	ENSMUST00000149628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026385	Dbi	ENSMUST00000128408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026385	Dbi	ENSMUST00000135937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026385	Dbi	ENSMUST00000112648	ENSMUSP00000108267	TRANSLATION	protein_coding	-	-	2	63	6	2	3.2	83.2	0	-4,-5	-	-	11.534	MINOR
ENSMUSG00000026095	Asnsd1	ENSMUST00000147021	ENSMUSP00000137676	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026095	Asnsd1	ENSMUST00000154402	ENSMUSP00000120873	TRANSLATION	protein_coding	stop	-	2	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026095	Asnsd1	ENSMUST00000123519	ENSMUSP00000139025	TRANSLATION	protein_coding	-	CCDS69888.1	1	150	3	0	0.5	33.2	0	-3,-6	-	-	5.19	MINOR
ENSMUSG00000026095	Asnsd1	ENSMUST00000027264	ENSMUSP00000027264	TRANSLATION	protein_coding	-	CCDS14954.1	1	627	16	0	1.5	38.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026095	Asnsd1	ENSMUST00000136468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026094	Stk17b	ENSMUST00000027263	ENSMUSP00000027263	TRANSLATION	protein_coding	-	CCDS14955.1	1	372	24	6.8	8.8	236.5	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000026094	Stk17b	ENSMUST00000187066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026094	Stk17b	ENSMUST00000185920	ENSMUSP00000139880	TRANSLATION	protein_coding	stop	-	5	95	7	2.5	0	109.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037474	Dtl	ENSMUST00000193977	ENSMUSP00000142111	TRANSLATION	nonsense_mediated_decay	-	-	2	124	0	1.82	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037474	Dtl	ENSMUST00000027933	ENSMUSP00000027933	TRANSLATION	protein_coding	-	CCDS15621.1	1	729	0	7.46	4.1	88.7	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000037474	Dtl	ENSMUST00000195765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037474	Dtl	ENSMUST00000195650	ENSMUSP00000141218	TRANSLATION	nonsense_mediated_decay	-	-	1	157	0	2.75	0	12.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037474	Dtl	ENSMUST00000192014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037474	Dtl	ENSMUST00000194064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026309	Ilkap	ENSMUST00000187049	ENSMUSP00000140752	TRANSLATION	nonsense_mediated_decay	start	-	1	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000191230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026309	Ilkap	ENSMUST00000027534	ENSMUSP00000027534	TRANSLATION	protein_coding	-	CCDS15162.1	1	392	12	6.224	6.3	214.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026309	Ilkap	ENSMUST00000186433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026309	Ilkap	ENSMUST00000187231	ENSMUSP00000139962	TRANSLATION	protein_coding	start	-	5	166	5	3.56	0	154.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000186986	ENSMUSP00000140074	TRANSLATION	nonsense_mediated_decay	-	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000189651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026309	Ilkap	ENSMUST00000187105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026309	Ilkap	ENSMUST00000185886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026309	Ilkap	ENSMUST00000187678	ENSMUSP00000140182	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000187306	ENSMUSP00000139834	TRANSLATION	protein_coding	-	-	5	78	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000190747	ENSMUSP00000140905	TRANSLATION	protein_coding	start	-	3	182	5	4.11	0	160.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026309	Ilkap	ENSMUST00000190519	ENSMUSP00000140048	TRANSLATION	protein_coding	stop	-	5	136	2	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033257	Ttll4	ENSMUST00000140591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033257	Ttll4	ENSMUST00000155753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033257	Ttll4	ENSMUST00000113678	ENSMUSP00000109308	TRANSLATION	protein_coding	-	-	5	1129	17	3.54	0	266.9	0	-4,-2	-	-	10.212	MINOR
ENSMUSG00000033257	Ttll4	ENSMUST00000128891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033257	Ttll4	ENSMUST00000129890	ENSMUSP00000119964	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033257	Ttll4	ENSMUST00000145132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033257	Ttll4	ENSMUST00000153636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033257	Ttll4	ENSMUST00000042125	ENSMUSP00000037406	TRANSLATION	protein_coding	-	CCDS15053.1	1	1193	20	4.02	0.5	347.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033257	Ttll4	ENSMUST00000143790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033257	Ttll4	ENSMUST00000141119	ENSMUSP00000116733	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033257	Ttll4	ENSMUST00000143925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008136	Fhl2	ENSMUST00000185893	ENSMUSP00000141170	TRANSLATION	protein_coding	-	CCDS14922.1	1	279	35	5.5	21.5	169.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000008136	Fhl2	ENSMUST00000187357	ENSMUSP00000140420	TRANSLATION	protein_coding	stop	-	2	21	2	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008136	Fhl2	ENSMUST00000008280	ENSMUSP00000008280	TRANSLATION	protein_coding	-	CCDS14922.1	1	279	35	5.5	21.5	169.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026085	Lyg1	ENSMUST00000114894	ENSMUSP00000110544	TRANSLATION	protein_coding	-	CCDS35543.1	1	197	0	3.4	1.5	0	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000026085	Lyg1	ENSMUST00000144184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026085	Lyg1	ENSMUST00000027254	ENSMUSP00000027254	TRANSLATION	protein_coding	-	-	5	197	0	3.2	1.5	0	0	3,-2	-	-	5.598	ALTERNATIVE:2
ENSMUSG00000037375	Hhat	ENSMUST00000128619	ENSMUSP00000120479	TRANSLATION	protein_coding	-	-	1	473	0	0	0	195.1	5	0,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000037375	Hhat	ENSMUST00000154755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037375	Hhat	ENSMUST00000044190	ENSMUSP00000046686	TRANSLATION	protein_coding	-	CCDS15628.1	1	499	0	0	0.5	195.1	5	0,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000037375	Hhat	ENSMUST00000123721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037375	Hhat	ENSMUST00000154203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037375	Hhat	ENSMUST00000192585	ENSMUSP00000141575	TRANSLATION	non_stop_decay	stop	-	1	507	0	0	0	195.1	5	0,-4	-	-	-1	MINOR
ENSMUSG00000037375	Hhat	ENSMUST00000192946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070594	Gm4788	ENSMUST00000111986	ENSMUSP00000107617	TRANSLATION	protein_coding	-	CCDS48387.1	1	820	0	12.6	0.5	318.9	0	3,-2	-	-	7.626	MINOR
ENSMUSG00000070594	Gm4788	ENSMUST00000027612	ENSMUSP00000027612	TRANSLATION	protein_coding	-	-	1	808	0	13	0	332.1	0	3,-2	-	-	9.216	MINOR
ENSMUSG00000070594	Gm4788	ENSMUST00000111989	ENSMUSP00000107620	TRANSLATION	protein_coding	-	CCDS35730.1	1	879	0	13.6	0.5	358.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026150	Mff	ENSMUST00000162573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026150	Mff	ENSMUST00000160786	ENSMUSP00000125230	TRANSLATION	protein_coding	-	CCDS78631.1	1	238	0	0	8.3	375.2	0	-4,-5	-	-	3.342	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000160972	ENSMUSP00000124200	TRANSLATION	protein_coding	-	CCDS78632.1	1	218	0	0	6.3	223.2	0	-4,-5	-	-	2.178	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000162003	ENSMUSP00000124334	TRANSLATION	protein_coding	-	-	5	316	0	0	3.4	461.2	0	-4,-5	-	-	6.489	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000162056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026150	Mff	ENSMUST00000160044	ENSMUSP00000125005	TRANSLATION	protein_coding	start/stop	-	1	145	0	0	0	166	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000078332	ENSMUSP00000077446	TRANSLATION	protein_coding	-	CCDS15098.1	1	291	0	0	5.1	469.5	0	-4,-5	-	-	7.686	PRINCIPAL:1
ENSMUSG00000026150	Mff	ENSMUST00000160632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026150	Mff	ENSMUST00000161648	ENSMUSP00000124164	TRANSLATION	protein_coding	-	-	5	243	0	0	3.4	359.6	0	-4,-5	-	-	0.987	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000162794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026150	Mff	ENSMUST00000073025	ENSMUSP00000072784	TRANSLATION	protein_coding	-	CCDS78630.1	1	239	0	0	8.3	373.4	0	-4,-5	-	-	3.234	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000161572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026150	Mff	ENSMUST00000160744	ENSMUSP00000125629	TRANSLATION	protein_coding	start	-	3	137	0	0	0	213.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000160750	ENSMUSP00000125223	TRANSLATION	protein_coding	start/stop	-	3	220	0	0	0	303.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000159279	ENSMUSP00000123713	TRANSLATION	protein_coding	start/stop	-	1	147	0	0	0	195.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026150	Mff	ENSMUST00000188333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040723	Rcsd1	ENSMUST00000040357	ENSMUSP00000043724	TRANSLATION	protein_coding	-	CCDS48426.1	1	412	0	0	1.5	104.4	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000040723	Rcsd1	ENSMUST00000192566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040723	Rcsd1	ENSMUST00000097474	ENSMUSP00000095082	TRANSLATION	protein_coding	-	CCDS48425.1	1	382	0	0	1.5	104.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000040723	Rcsd1	ENSMUST00000193714	ENSMUSP00000141913	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040723	Rcsd1	ENSMUST00000195045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041859	Mcm3	ENSMUST00000190421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041859	Mcm3	ENSMUST00000053266	ENSMUSP00000059192	TRANSLATION	protein_coding	-	CCDS14843.1	1	812	16	11.4	0.5	578.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041859	Mcm3	ENSMUST00000185296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041859	Mcm3	ENSMUST00000191061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041859	Mcm3	ENSMUST00000188112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038235	F11r	ENSMUST00000144497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038235	F11r	ENSMUST00000043839	ENSMUSP00000041907	TRANSLATION	protein_coding	-	CCDS15496.1	1	300	0	5.68	2.7	96.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038235	F11r	ENSMUST00000155913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040265	Dnm3	ENSMUST00000160173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040265	Dnm3	ENSMUST00000162330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040265	Dnm3	ENSMUST00000161894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040265	Dnm3	ENSMUST00000159763	ENSMUSP00000125356	TRANSLATION	protein_coding	-	-	1	319	0	5.582	0	143.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040265	Dnm3	ENSMUST00000161539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040265	Dnm3	ENSMUST00000195403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040265	Dnm3	ENSMUST00000193110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040265	Dnm3	ENSMUST00000070330	ENSMUSP00000064538	TRANSLATION	protein_coding	-	CCDS48417.1	1	859	18	17.45	7.6	689.9	0	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000040265	Dnm3	ENSMUST00000086074	ENSMUSP00000083241	TRANSLATION	protein_coding	-	-	5	863	18	17.45	7.6	689.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000040265	Dnm3	ENSMUST00000161155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040265	Dnm3	ENSMUST00000160665	ENSMUSP00000124593	TRANSLATION	protein_coding	-	-	1	319	0	5.45	0	143.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040265	Dnm3	ENSMUST00000195768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070644	Etnk2	ENSMUST00000147909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070644	Etnk2	ENSMUST00000131450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070644	Etnk2	ENSMUST00000135222	ENSMUSP00000114272	TRANSLATION	protein_coding	-	CCDS15296.2	1	385	16	4.96	2.9	208.5	0	-4,-7	-	-	18.731	PRINCIPAL:1
ENSMUSG00000070644	Etnk2	ENSMUST00000156832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070644	Etnk2	ENSMUST00000129213	ENSMUSP00000122244	TRANSLATION	protein_coding	-	-	2	282	14	4.42	3.6	208.5	0	-4,-5	-	-	16.588	MINOR
ENSMUSG00000062497	Olfr1411	ENSMUST00000190844	ENSMUSP00000140373	TRANSLATION	protein_coding	-	CCDS15173.1	5	323	0	0.16	1.5	178.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062497	Olfr1411	ENSMUST00000216444	ENSMUSP00000150254	TRANSLATION	protein_coding	-	CCDS15173.1	5	323	0	0.16	1.5	178.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062497	Olfr1411	ENSMUST00000073748	ENSMUSP00000073422	TRANSLATION	protein_coding	-	CCDS15173.1	-	323	0	0.16	1.5	178.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050625	Ccdc121	ENSMUST00000058825	ENSMUSP00000052294	TRANSLATION	protein_coding	-	CCDS48472.1	-	323	0	0	1.5	263.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026082	Rev1	ENSMUST00000193922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026082	Rev1	ENSMUST00000193472	ENSMUSP00000141875	TRANSLATION	nonsense_mediated_decay	start	-	3	82	6	2.25	0	28.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026082	Rev1	ENSMUST00000194815	ENSMUSP00000141815	TRANSLATION	nonsense_mediated_decay	start	-	5	93	3	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026082	Rev1	ENSMUST00000195383	ENSMUSP00000141647	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026082	Rev1	ENSMUST00000193697	ENSMUSP00000141560	TRANSLATION	protein_coding	stop	-	3	98	0	2	0	24.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026082	Rev1	ENSMUST00000027251	ENSMUSP00000027251	TRANSLATION	protein_coding	-	CCDS14899.1	1	1249	17	16.9	0.5	434.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026082	Rev1	ENSMUST00000192697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026082	Rev1	ENSMUST00000192594	ENSMUSP00000141379	TRANSLATION	protein_coding	stop	-	2	138	0	3.25	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026082	Rev1	ENSMUST00000193008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026082	Rev1	ENSMUST00000193113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026082	Rev1	ENSMUST00000194650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066652	Lefty2	ENSMUST00000085797	ENSMUSP00000082952	TRANSLATION	protein_coding	-	CCDS15575.1	1	368	0	0.42	7.5	78.3	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000066652	Lefty2	ENSMUST00000155546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026278	Bok	ENSMUST00000188394	ENSMUSP00000140412	TRANSLATION	protein_coding	stop	-	2	121	0	1.17	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026278	Bok	ENSMUST00000200888	ENSMUSP00000144146	TRANSLATION	protein_coding	start	-	3	132	0	1.17	0	69.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026278	Bok	ENSMUST00000201863	ENSMUSP00000144347	TRANSLATION	protein_coding	-	CCDS15193.1	5	213	0	1.77	20.3	86	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026278	Bok	ENSMUST00000027499	ENSMUSP00000027499	TRANSLATION	protein_coding	-	CCDS15193.1	1	213	0	1.77	20.3	86	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026278	Bok	ENSMUST00000185685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026343	Gpr39	ENSMUST00000027581	ENSMUSP00000027581	TRANSLATION	protein_coding	-	CCDS48344.1	1	456	0	1	1.5	119.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026343	Gpr39	ENSMUST00000159359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116048	Septin2	ENSMUST00000179353	ENSMUSP00000136366	TRANSLATION	protein_coding	-	CCDS15190.1	5	361	16	9	13.5	424	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000116048	Septin2	ENSMUST00000172165	ENSMUSP00000127276	TRANSLATION	protein_coding	-	-	5	321	16	8	2.9	411.1	0	-4,-5	-	-	15.836	MINOR
ENSMUSG00000116048	Septin2	ENSMUST00000168776	ENSMUSP00000132850	TRANSLATION	protein_coding	-	CCDS15190.1	5	361	16	9	13.5	424	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025993	Slc40a1	ENSMUST00000191247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025993	Slc40a1	ENSMUST00000186822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025993	Slc40a1	ENSMUST00000188252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025993	Slc40a1	ENSMUST00000187406	ENSMUSP00000140734	TRANSLATION	protein_coding	stop	-	1	70	0	1.1	0	69.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025993	Slc40a1	ENSMUST00000027137	ENSMUSP00000027137	TRANSLATION	protein_coding	-	CCDS14933.1	1	570	0	2.85	0.5	634.1	2	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025993	Slc40a1	ENSMUST00000187420	ENSMUSP00000140549	TRANSLATION	protein_coding	stop	-	1	70	0	1.1	0	69.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025993	Slc40a1	ENSMUST00000186804	ENSMUSP00000140969	TRANSLATION	protein_coding	stop	-	1	70	0	1.1	0	69.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025993	Slc40a1	ENSMUST00000186755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026037	Orc2	ENSMUST00000114325	ENSMUSP00000109964	TRANSLATION	protein_coding	-	CCDS14974.1	1	528	0	8.5	0.5	356.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026037	Orc2	ENSMUST00000027198	ENSMUSP00000027198	TRANSLATION	protein_coding	-	CCDS14975.1	1	576	0	8.5	0.5	356.9	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000026037	Orc2	ENSMUST00000151723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026037	Orc2	ENSMUST00000190695	ENSMUSP00000139869	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026037	Orc2	ENSMUST00000191206	ENSMUSP00000141138	TRANSLATION	protein_coding	stop	-	1	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000189336	ENSMUSP00000140643	TRANSLATION	nonsense_mediated_decay	start	-	3	131	0	2.75	0	35.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000185743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026104	Stat1	ENSMUST00000191435	ENSMUSP00000139746	TRANSLATION	protein_coding	-	-	5	712	0	18.66	3.4	630.2	0	-4,-5	-	-	7.593	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000186857	ENSMUSP00000140875	TRANSLATION	protein_coding	-	CCDS56628.1	1	749	0	19.66	7.5	684.4	0	-4,-5	-	-	14.736	PRINCIPAL:1
ENSMUSG00000026104	Stat1	ENSMUST00000189347	ENSMUSP00000141125	TRANSLATION	protein_coding	-	-	5	712	0	18.66	3.4	630.2	0	-4,-5	-	-	7.593	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000189244	ENSMUSP00000140482	TRANSLATION	protein_coding	start	-	1	243	0	5.73	0	132.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000186186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026104	Stat1	ENSMUST00000189075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026104	Stat1	ENSMUST00000186574	ENSMUSP00000140518	TRANSLATION	protein_coding	-	-	1	712	0	18.66	3.4	630.2	0	-4,-5	-	-	7.593	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000188681	ENSMUSP00000141144	TRANSLATION	protein_coding	stop	-	2	154	0	4	0	139.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000186057	ENSMUSP00000141132	TRANSLATION	protein_coding	-	CCDS78581.1	1	755	0	19.792	0.5	676.1	0	-4,-5	-	-	11.502	MINOR
ENSMUSG00000026104	Stat1	ENSMUST00000070968	ENSMUSP00000066743	TRANSLATION	protein_coding	-	CCDS56628.1	1	749	0	19.66	7.5	684.4	0	-4,-5	-	-	14.736	PRINCIPAL:1
ENSMUSG00000036707	Cab39	ENSMUST00000187623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036707	Cab39	ENSMUST00000113360	ENSMUSP00000108987	TRANSLATION	protein_coding	-	CCDS15112.1	1	341	0	7.58	21.5	475.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036707	Cab39	ENSMUST00000130754	ENSMUSP00000114690	TRANSLATION	protein_coding	stop	-	3	104	0	2.33	0	88.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036707	Cab39	ENSMUST00000126962	ENSMUSP00000116086	TRANSLATION	protein_coding	stop	-	3	38	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036707	Cab39	ENSMUST00000097666	ENSMUSP00000095270	TRANSLATION	protein_coding	-	CCDS15112.1	5	341	0	7.58	21.5	475.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026258	Snorc	ENSMUST00000027476	ENSMUSP00000027476	TRANSLATION	protein_coding	-	CCDS48305.1	1	121	0	0	2.9	147.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000026258	Snorc	ENSMUST00000191095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007805	Twist2	ENSMUST00000007949	ENSMUSP00000007949	TRANSLATION	protein_coding	-	CCDS15166.1	1	160	0	0.6	16.8	60	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000007805	Twist2	ENSMUST00000186075	ENSMUSP00000139531	TRANSLATION	protein_coding	-	CCDS15166.1	-	160	0	0.6	16.8	60	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026532	Spta1	ENSMUST00000027817	ENSMUSP00000027817	TRANSLATION	protein_coding	-	CCDS35795.1	1	2415	0	31.67	1.5	1553.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026532	Spta1	ENSMUST00000156092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026064	Ptp4a1	ENSMUST00000153681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026064	Ptp4a1	ENSMUST00000232841	ENSMUSP00000156862	TRANSLATION	protein_coding	-	CCDS14858.1	-	173	11	4.75	21.5	33.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000026064	Ptp4a1	ENSMUST00000130934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000188799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000190058	ENSMUSP00000140204	TRANSLATION	nonsense_mediated_decay	-	-	5	158	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025949	Pikfyve	ENSMUST00000213081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025949	Pikfyve	ENSMUST00000189925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025949	Pikfyve	ENSMUST00000097707	ENSMUSP00000095314	TRANSLATION	protein_coding	-	CCDS78600.1	1	2097	10	8.478	4.1	390.9	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000025949	Pikfyve	ENSMUST00000185317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000186404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000185263	ENSMUSP00000140932	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025949	Pikfyve	ENSMUST00000190847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000187579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025949	Pikfyve	ENSMUST00000081154	ENSMUSP00000079926	TRANSLATION	protein_coding	-	CCDS35601.1	1	2052	10	8.478	2.9	390.9	0	-4,-5	-	-	18.613	PRINCIPAL:3
ENSMUSG00000038733	Wdr26	ENSMUST00000159673	ENSMUSP00000125023	TRANSLATION	nonsense_mediated_decay	start	-	5	147	0	2.662	0	47.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038733	Wdr26	ENSMUST00000159698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038733	Wdr26	ENSMUST00000162819	ENSMUSP00000124592	TRANSLATION	protein_coding	-	CCDS15583.2	1	641	0	5.64	0.5	104.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000038733	Wdr26	ENSMUST00000036329	ENSMUSP00000045177	TRANSLATION	nonsense_mediated_decay	start	-	5	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038733	Wdr26	ENSMUST00000161531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038733	Wdr26	ENSMUST00000159290	ENSMUSP00000123863	TRANSLATION	protein_coding	start	-	5	120	0	1.93	0	47.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038733	Wdr26	ENSMUST00000162963	ENSMUSP00000124186	TRANSLATION	protein_coding	start	-	5	625	0	5.64	0.5	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038733	Wdr26	ENSMUST00000159625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038733	Wdr26	ENSMUST00000237749	ENSMUSP00000158345	TRANSLATION	protein_coding	-	-	-	729	0	5.64	0	104.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000118591	AC147806.1	ENSMUST00000239361	ENSMUSP00000159208	TRANSLATION	protein_coding	-	-	-	296	0	0.14	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046836	Brox	ENSMUST00000193326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046836	Brox	ENSMUST00000194438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046836	Brox	ENSMUST00000057062	ENSMUSP00000061345	TRANSLATION	protein_coding	-	CCDS56662.1	1	411	0	11.16	14.8	142.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000046836	Brox	ENSMUST00000195054	ENSMUSP00000141629	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046836	Brox	ENSMUST00000194327	ENSMUSP00000141248	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046836	Brox	ENSMUST00000194695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046836	Brox	ENSMUST00000192829	ENSMUSP00000141585	TRANSLATION	protein_coding	stop	-	3	91	0	2.83	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046836	Brox	ENSMUST00000163528	ENSMUSP00000132333	TRANSLATION	protein_coding	-	CCDS56662.1	1	411	0	11.16	14.8	142.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000046836	Brox	ENSMUST00000194089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039783	Kmo	ENSMUST00000097458	ENSMUSP00000095067	TRANSLATION	protein_coding	-	-	5	445	33	9.5	0	25.2	2	-4,-7	-	-	16.398	MINOR
ENSMUSG00000039783	Kmo	ENSMUST00000142223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039783	Kmo	ENSMUST00000150646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039783	Kmo	ENSMUST00000040250	ENSMUSP00000038914	TRANSLATION	protein_coding	-	CCDS15548.1	1	479	33	10.3	1.5	25.2	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039783	Kmo	ENSMUST00000140474	ENSMUSP00000122943	TRANSLATION	nonsense_mediated_decay	-	-	1	255	24	4.61	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039783	Kmo	ENSMUST00000137174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061815	Rufy4	ENSMUST00000127134	ENSMUSP00000115873	TRANSLATION	protein_coding	-	CCDS48289.1	1	563	7	2.2	1.5	31	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000061815	Rufy4	ENSMUST00000080167	ENSMUSP00000079062	TRANSLATION	protein_coding	-	CCDS15039.1	1	479	7	1.4	0.5	28.7	0	-4,-2	-	-	15.372	MINOR
ENSMUSG00000042429	Adora1	ENSMUST00000086465	ENSMUSP00000083656	TRANSLATION	protein_coding	-	CCDS15305.1	1	326	0	3	7.5	171.3	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042429	Adora1	ENSMUST00000187631	ENSMUSP00000140801	TRANSLATION	protein_coding	stop	-	3	178	0	2	0	101.5	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000042429	Adora1	ENSMUST00000169927	ENSMUSP00000132105	TRANSLATION	protein_coding	-	CCDS15305.1	5	326	0	3	7.5	171.3	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042429	Adora1	ENSMUST00000038191	ENSMUSP00000043522	TRANSLATION	protein_coding	-	CCDS15305.1	1	326	0	3	7.5	171.3	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026617	Bpnt1	ENSMUST00000110965	ENSMUSP00000106590	TRANSLATION	protein_coding	-	CCDS83658.1	1	253	8	6.33	3.7	173.5	0	-4,-5	-	-	12.602	MINOR
ENSMUSG00000026617	Bpnt1	ENSMUST00000137757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026617	Bpnt1	ENSMUST00000210277	ENSMUSP00000147674	TRANSLATION	protein_coding	-	CCDS83657.1	5	323	9	7.95	7.5	207.6	0	-3,-1	-	-	19.558	MINOR
ENSMUSG00000026617	Bpnt1	ENSMUST00000027916	ENSMUSP00000027916	TRANSLATION	protein_coding	-	CCDS15597.1	1	308	9	7.83	16.1	210.3	0	-3,-1	-	-	21.76	PRINCIPAL:1
ENSMUSG00000026617	Bpnt1	ENSMUST00000151769	ENSMUSP00000117122	TRANSLATION	protein_coding	stop	-	5	83	2	2.58	0	49.1	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000026618	Iars2	ENSMUST00000131770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026618	Iars2	ENSMUST00000027921	ENSMUSP00000027921	TRANSLATION	protein_coding	-	CCDS15596.1	1	1012	24	15.5	1.5	649.6	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000026618	Iars2	ENSMUST00000153211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026618	Iars2	ENSMUST00000110974	ENSMUSP00000106601	TRANSLATION	protein_coding	-	-	1	560	9	8.96	0.5	426.1	0	-3,1	-	-	0	MINOR
ENSMUSG00000026618	Iars2	ENSMUST00000110975	ENSMUSP00000106603	TRANSLATION	protein_coding	-	-	5	733	24	12.626	0	558.6	0	-3,1	-	-	6.792	MINOR
ENSMUSG00000036480	Prss56	ENSMUST00000044533	ENSMUSP00000138773	TRANSLATION	protein_coding	-	CCDS59538.1	1	604	10	4.38	0.5	217.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000110100	Gm45261	ENSMUST00000211023	ENSMUSP00000148020	TRANSLATION	protein_coding	-	-	5	197	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000055214	Pld5	ENSMUST00000144340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055214	Pld5	ENSMUST00000156184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055214	Pld5	ENSMUST00000111167	ENSMUSP00000106797	TRANSLATION	protein_coding	-	CCDS56660.1	1	474	0	0	2.9	29.5	1	-1,-5	-	-	6.926	ALTERNATIVE:2
ENSMUSG00000055214	Pld5	ENSMUST00000111166	ENSMUSP00000106796	TRANSLATION	protein_coding	-	-	1	67	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055214	Pld5	ENSMUST00000125404	ENSMUSP00000121428	TRANSLATION	nonsense_mediated_decay	-	-	1	109	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000055214	Pld5	ENSMUST00000065967	ENSMUSP00000069326	TRANSLATION	protein_coding	-	CCDS15552.1	1	536	0	0	5.1	29.5	1	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000026305	Lrrfip1	ENSMUST00000188708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026305	Lrrfip1	ENSMUST00000097649	ENSMUSP00000095254	TRANSLATION	protein_coding	-	CCDS48320.1	1	729	0	2	0.5	280.9	0	-4,-5	-	-	7.716	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000189617	ENSMUSP00000139811	TRANSLATION	protein_coding	-	CCDS78647.1	1	663	0	2	1.5	320.5	0	-4,-5	-	-	10.092	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000068167	ENSMUSP00000063878	TRANSLATION	protein_coding	-	-	5	628	0	2	0	320.7	0	-4,-5	-	-	10.104	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000097650	ENSMUSP00000095255	TRANSLATION	protein_coding	-	CCDS35662.1	1	628	0	2	1.5	320.5	0	-4,-5	-	-	10.092	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000187375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026305	Lrrfip1	ENSMUST00000189505	ENSMUSP00000141024	TRANSLATION	protein_coding	stop	-	1	323	0	2	0	223.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000068116	ENSMUSP00000065850	TRANSLATION	protein_coding	-	CCDS48319.1	5	428	0	2	2.7	352.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026305	Lrrfip1	ENSMUST00000186762	ENSMUSP00000139902	TRANSLATION	protein_coding	stop	-	5	98	0	0	0	66.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000188094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026305	Lrrfip1	ENSMUST00000185531	ENSMUSP00000139497	TRANSLATION	protein_coding	stop	-	5	575	0	2	0	284.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026305	Lrrfip1	ENSMUST00000187532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026496	Parp1	ENSMUST00000191833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026496	Parp1	ENSMUST00000194608	ENSMUSP00000142295	TRANSLATION	nonsense_mediated_decay	-	-	5	68	4	1.566	0	60.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026496	Parp1	ENSMUST00000194434	ENSMUSP00000141775	TRANSLATION	protein_coding	stop	-	2	67	2	2.16	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026496	Parp1	ENSMUST00000191639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026496	Parp1	ENSMUST00000192411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026496	Parp1	ENSMUST00000195560	ENSMUSP00000141301	TRANSLATION	protein_coding	start	-	5	99	2	3.08	0	85.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026496	Parp1	ENSMUST00000193238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026496	Parp1	ENSMUST00000027777	ENSMUSP00000027777	TRANSLATION	protein_coding	-	CCDS15569.1	1	1014	6	23.49	0	740.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067028	Cntnap5b	ENSMUST00000185484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067028	Cntnap5b	ENSMUST00000188735	ENSMUSP00000139877	TRANSLATION	protein_coding	start	-	1	921	0	4.26	0	191.1	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000067028	Cntnap5b	ENSMUST00000086738	ENSMUSP00000083944	TRANSLATION	protein_coding	-	CCDS35682.1	2	1292	0	9.07	1.5	386.9	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000094651	Gal3st2	ENSMUST00000094663	ENSMUSP00000092250	TRANSLATION	protein_coding	-	CCDS15197.1	1	396	0	0	2.7	494	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094651	Gal3st2	ENSMUST00000190710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094651	Gal3st2	ENSMUST00000187896	ENSMUSP00000140697	TRANSLATION	protein_coding	stop	-	5	67	0	0	0	92.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079588	Tmem182	ENSMUST00000114765	ENSMUSP00000110413	TRANSLATION	protein_coding	-	CCDS35550.1	1	229	0	0	8.8	207.9	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000048000	Gigyf2	ENSMUST00000174583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048000	Gigyf2	ENSMUST00000173663	ENSMUSP00000133416	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000174605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048000	Gigyf2	ENSMUST00000174535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048000	Gigyf2	ENSMUST00000173235	ENSMUSP00000134677	TRANSLATION	nonsense_mediated_decay	start	-	5	787	0	0.88	0	73.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000173152	ENSMUSP00000134086	TRANSLATION	protein_coding	stop	-	5	172	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000027475	ENSMUSP00000027475	TRANSLATION	protein_coding	-	CCDS15133.1	1	1291	0	0.88	0.5	73.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000048000	Gigyf2	ENSMUST00000164992	ENSMUSP00000129046	TRANSLATION	protein_coding	stop	-	1	721	0	0.88	0	73.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000172794	ENSMUSP00000134077	TRANSLATION	protein_coding	-	CCDS56636.1	5	1285	0	0.88	0.5	73.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048000	Gigyf2	ENSMUST00000174334	ENSMUSP00000133666	TRANSLATION	protein_coding	stop	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000172964	ENSMUSP00000133392	TRANSLATION	nonsense_mediated_decay	-	-	5	1122	0	0.88	0	73.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000174671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048000	Gigyf2	ENSMUST00000172776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048000	Gigyf2	ENSMUST00000174501	ENSMUSP00000133327	TRANSLATION	protein_coding	-	CCDS15133.1	5	1291	0	0.88	0.5	73.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000048000	Gigyf2	ENSMUST00000174482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048000	Gigyf2	ENSMUST00000172736	ENSMUSP00000134620	TRANSLATION	protein_coding	start/stop	-	3	222	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000173173	ENSMUSP00000134193	TRANSLATION	protein_coding	stop	-	1	877	0	0.88	0	73.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000173636	ENSMUSP00000134660	TRANSLATION	protein_coding	start/stop	-	5	258	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000173148	ENSMUSP00000134553	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048000	Gigyf2	ENSMUST00000172976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048000	Gigyf2	ENSMUST00000173850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048000	Gigyf2	ENSMUST00000187038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048000	Gigyf2	ENSMUST00000174846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042772	Smg7	ENSMUST00000186900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042772	Smg7	ENSMUST00000186692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042772	Smg7	ENSMUST00000188937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042772	Smg7	ENSMUST00000043560	ENSMUSP00000041241	TRANSLATION	protein_coding	-	CCDS48394.1	1	1146	0	11.18	1.5	285.9	0	-4,-5	-	-	11.572	MINOR
ENSMUSG00000042772	Smg7	ENSMUST00000073441	ENSMUSP00000073144	TRANSLATION	protein_coding	-	CCDS35740.1	1	1134	0	11.51	5.3	285.9	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000042772	Smg7	ENSMUST00000111836	ENSMUSP00000107467	TRANSLATION	protein_coding	-	CCDS48395.1	1	1138	0	11.51	5.3	285.9	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000005681	Apoa2	ENSMUST00000111319	ENSMUSP00000106951	TRANSLATION	protein_coding	-	CCDS35773.1	3	102	0	2	5.1	136.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005681	Apoa2	ENSMUST00000005824	ENSMUSP00000005824	TRANSLATION	protein_coding	-	CCDS35773.1	1	102	0	2	5.1	136.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005681	Apoa2	ENSMUST00000111321	ENSMUSP00000106953	TRANSLATION	protein_coding	-	CCDS35773.1	2	102	0	2	5.1	136.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005681	Apoa2	ENSMUST00000111320	ENSMUSP00000106952	TRANSLATION	protein_coding	-	CCDS35773.1	2	102	0	2	5.1	136.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000016200	Syt14	ENSMUST00000215093	ENSMUSP00000151129	TRANSLATION	protein_coding	-	-	5	838	0	1.8	1.5	68.3	0	-4,-6	-	-	12.084	MINOR
ENSMUSG00000016200	Syt14	ENSMUST00000195530	ENSMUSP00000141563	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000016200	Syt14	ENSMUST00000191907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016200	Syt14	ENSMUST00000195354	ENSMUSP00000142190	TRANSLATION	protein_coding	-	CCDS48489.1	1	555	0	1.8	9.3	68.3	1	-4,-7	-	-	14.868	PRINCIPAL:1
ENSMUSG00000016200	Syt14	ENSMUST00000016344	ENSMUSP00000016344	TRANSLATION	protein_coding	-	CCDS78780.1	1	574	0	1.83	9.4	63.2	1	-4,-7	-	-	14.55	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000162257	ENSMUSP00000125334	TRANSLATION	nonsense_mediated_decay	start	-	5	536	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000160871	ENSMUSP00000123768	TRANSLATION	protein_coding	stop	-	2	164	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025907	Rb1cc1	ENSMUST00000162795	ENSMUSP00000124676	TRANSLATION	protein_coding	stop	-	5	873	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000161183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159530	ENSMUSP00000124220	TRANSLATION	protein_coding	start	-	1	227	0	0	0	94.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000162418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000160062	ENSMUSP00000123876	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159906	ENSMUSP00000125396	TRANSLATION	protein_coding	stop	-	2	93	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000162210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000161327	ENSMUSP00000125348	TRANSLATION	protein_coding	start	-	1	1468	0	0	0	89.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025907	Rb1cc1	ENSMUST00000159656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025907	Rb1cc1	ENSMUST00000027040	ENSMUSP00000027040	TRANSLATION	protein_coding	-	CCDS35507.1	1	1588	0	0	1.5	89.3	0	-1,-6	-	-	5.646	PRINCIPAL:1
ENSMUSG00000025915	Sgk3	ENSMUST00000188486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025915	Sgk3	ENSMUST00000171265	ENSMUSP00000127462	TRANSLATION	protein_coding	-	CCDS14816.1	1	496	19	12.75	3.9	329.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025915	Sgk3	ENSMUST00000188782	ENSMUSP00000140318	TRANSLATION	nonsense_mediated_decay	-	-	1	349	19	9.45	0	230.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025915	Sgk3	ENSMUST00000191338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025915	Sgk3	ENSMUST00000188625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025915	Sgk3	ENSMUST00000097826	ENSMUSP00000095437	TRANSLATION	protein_coding	-	CCDS14816.1	1	496	19	12.75	3.9	329.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025915	Sgk3	ENSMUST00000188830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025915	Sgk3	ENSMUST00000166384	ENSMUSP00000130078	TRANSLATION	protein_coding	-	CCDS14816.1	1	496	19	12.75	3.9	329.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025915	Sgk3	ENSMUST00000189050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025915	Sgk3	ENSMUST00000188298	ENSMUSP00000139942	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	1.75	0	29.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025915	Sgk3	ENSMUST00000188738	ENSMUSP00000140496	TRANSLATION	nonsense_mediated_decay	-	-	1	333	19	9.33	0	230.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025915	Sgk3	ENSMUST00000168907	ENSMUSP00000126861	TRANSLATION	protein_coding	-	CCDS14816.1	1	496	19	12.75	3.9	329.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000054976	Nyap2	ENSMUST00000137862	ENSMUSP00000120767	TRANSLATION	protein_coding	-	-	1	650	0	0	2.7	621.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054976	Nyap2	ENSMUST00000123285	ENSMUSP00000122935	TRANSLATION	protein_coding	-	-	1	716	0	0	2.7	791.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054976	Nyap2	ENSMUST00000113494	ENSMUSP00000109122	TRANSLATION	protein_coding	-	-	1	650	0	0	2.7	621.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054976	Nyap2	ENSMUST00000068275	ENSMUSP00000065468	TRANSLATION	protein_coding	-	-	1	737	0	0	0.5	567.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054976	Nyap2	ENSMUST00000123720	ENSMUSP00000117661	TRANSLATION	protein_coding	-	-	1	682	0	0	1.5	596.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079440	Alpi	ENSMUST00000113270	ENSMUSP00000108895	TRANSLATION	protein_coding	-	CCDS35650.1	1	554	12	9.9	0.5	598.8	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000046856	Gpr1	ENSMUST00000187533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046856	Gpr1	ENSMUST00000050536	ENSMUSP00000051417	TRANSLATION	protein_coding	-	CCDS14998.1	1	353	0	0.48	2.7	134.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026782	Abi2	ENSMUST00000188618	ENSMUSP00000140274	TRANSLATION	protein_coding	-	CCDS78593.1	1	487	0	12.24	0.5	153.1	0	-4,-5	-	-	8.136	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000187400	ENSMUSP00000139646	TRANSLATION	protein_coding	start	-	5	252	0	6.08	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000189649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026782	Abi2	ENSMUST00000187709	ENSMUSP00000139867	TRANSLATION	protein_coding	-	-	5	475	0	11.09	16.5	216.8	0	-4,-5	-	-	13.66	ALTERNATIVE:1
ENSMUSG00000026782	Abi2	ENSMUST00000052332	ENSMUSP00000058754	TRANSLATION	protein_coding	-	CCDS14991.1	1	446	0	10.91	14.5	216.8	0	-4,-5	-	-	12.784	PRINCIPAL:2
ENSMUSG00000026782	Abi2	ENSMUST00000191493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026782	Abi2	ENSMUST00000189980	ENSMUSP00000141068	TRANSLATION	protein_coding	-	CCDS78594.1	1	480	0	11.99	0.5	217.5	0	-4,-5	-	-	11.502	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000188594	ENSMUSP00000140750	TRANSLATION	protein_coding	-	-	5	458	0	11.16	6.6	216.8	0	-4,-5	-	-	11.242	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000185788	ENSMUSP00000139483	TRANSLATION	protein_coding	start	-	5	360	0	9.16	0	188.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000189082	ENSMUSP00000140522	TRANSLATION	protein_coding	stop	-	5	151	0	4.49	0	118.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000190158	ENSMUSP00000139743	TRANSLATION	protein_coding	start	-	5	337	0	8.01	0	98.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026782	Abi2	ENSMUST00000186097	ENSMUSP00000139501	TRANSLATION	protein_coding	start	-	5	395	0	9.84	0	98.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059371	Olfr427	ENSMUST00000080831	ENSMUSP00000079644	TRANSLATION	protein_coding	-	CCDS48455.1	-	315	0	0.3	5.2	195.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059371	Olfr427	ENSMUST00000213832	ENSMUSP00000149570	TRANSLATION	protein_coding	-	CCDS48455.1	5	315	0	0.3	5.2	195.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026123	Plekhb2	ENSMUST00000156687	ENSMUSP00000140475	TRANSLATION	protein_coding	-	CCDS78558.1	1	204	10	3	0.5	38.2	0	-4,-2	-	-	18	MINOR
ENSMUSG00000026123	Plekhb2	ENSMUST00000191722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026123	Plekhb2	ENSMUST00000027297	ENSMUSP00000027297	TRANSLATION	protein_coding	-	CCDS14874.1	1	221	10	3	10.8	38.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000026123	Plekhb2	ENSMUST00000152654	ENSMUSP00000116777	TRANSLATION	protein_coding	stop	-	5	65	10	1.5	0	25.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000013593	Ndufs2	ENSMUST00000138069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013593	Ndufs2	ENSMUST00000136976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013593	Ndufs2	ENSMUST00000150108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013593	Ndufs2	ENSMUST00000191871	ENSMUSP00000141942	TRANSLATION	protein_coding	stop	-	5	145	0	3	0	39	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013593	Ndufs2	ENSMUST00000111318	ENSMUSP00000106950	TRANSLATION	protein_coding	-	-	5	437	0	10.24	0	370.4	0	-4,0	-	-	6.822	MINOR
ENSMUSG00000013593	Ndufs2	ENSMUST00000013737	ENSMUSP00000013737	TRANSLATION	protein_coding	-	CCDS15484.1	1	463	0	10.99	8.8	431.7	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000013593	Ndufs2	ENSMUST00000131286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013593	Ndufs2	ENSMUST00000194778	ENSMUSP00000141370	TRANSLATION	protein_coding	stop	-	5	231	0	5.41	0	79.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090553	Snrpe	ENSMUST00000164574	ENSMUSP00000131061	TRANSLATION	protein_coding	-	-	3	69	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000090553	Snrpe	ENSMUST00000171264	ENSMUSP00000132543	TRANSLATION	protein_coding	stop	-	5	25	2	0.5	0	27.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090553	Snrpe	ENSMUST00000166291	ENSMUSP00000132376	TRANSLATION	protein_coding	-	-	3	52	0	1.58	0	0	0	-4,-1	-	-	3.258	MINOR
ENSMUSG00000090553	Snrpe	ENSMUST00000172079	ENSMUSP00000133244	TRANSLATION	nonsense_mediated_decay	-	-	2	69	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000090553	Snrpe	ENSMUST00000166915	ENSMUSP00000128400	TRANSLATION	protein_coding	-	CCDS48364.1	1	92	5	2.91	19.5	63.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000090553	Snrpe	ENSMUST00000164096	ENSMUSP00000127164	TRANSLATION	protein_coding	-	-	2	91	2	2.41	0	45.5	0	-4,-1	-	-	11.252	MINOR
ENSMUSG00000033813	Tcea1	ENSMUST00000081551	ENSMUSP00000080266	TRANSLATION	protein_coding	-	CCDS35505.1	1	301	4	7.5	10.8	256.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000033813	Tcea1	ENSMUST00000165720	ENSMUSP00000129157	TRANSLATION	protein_coding	-	CCDS48212.1	5	312	4	6.75	0.5	256.1	0	-4,-7	-	-	14.5	MINOR
ENSMUSG00000062590	Armc9	ENSMUST00000153389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062590	Armc9	ENSMUST00000155168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062590	Armc9	ENSMUST00000186509	ENSMUSP00000139539	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062590	Armc9	ENSMUST00000150059	ENSMUSP00000116908	TRANSLATION	protein_coding	start/stop	-	3	254	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062590	Armc9	ENSMUST00000126579	ENSMUSP00000116445	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062590	Armc9	ENSMUST00000135973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062590	Armc9	ENSMUST00000113309	ENSMUSP00000108934	TRANSLATION	protein_coding	-	CCDS78642.1	1	818	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000062590	Armc9	ENSMUST00000123618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062590	Armc9	ENSMUST00000027434	ENSMUSP00000027434	TRANSLATION	protein_coding	-	CCDS15118.1	1	817	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000062590	Armc9	ENSMUST00000153653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062590	Armc9	ENSMUST00000156675	ENSMUSP00000119749	TRANSLATION	protein_coding	start	-	3	145	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062590	Armc9	ENSMUST00000134858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062590	Armc9	ENSMUST00000131412	ENSMUSP00000117267	TRANSLATION	protein_coding	-	CCDS48303.1	1	666	0	0	4.1	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000042414	Prdm14	ENSMUST00000047577	ENSMUSP00000044245	TRANSLATION	protein_coding	-	CCDS48221.1	1	561	23	5.18	1.5	72.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059503	Olfr248	ENSMUST00000075329	ENSMUSP00000074799	TRANSLATION	protein_coding	-	CCDS15543.1	-	309	0	0	2.7	136.2	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056268	Dennd1b	ENSMUST00000200429	ENSMUSP00000143783	TRANSLATION	nonsense_mediated_decay	-	-	5	352	0	9.58	0	219.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056268	Dennd1b	ENSMUST00000200295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056268	Dennd1b	ENSMUST00000168527	ENSMUSP00000127580	TRANSLATION	protein_coding	-	CCDS48384.1	5	766	0	11.58	0.5	257	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056268	Dennd1b	ENSMUST00000198759	ENSMUSP00000143691	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056268	Dennd1b	ENSMUST00000200533	ENSMUSP00000142738	TRANSLATION	protein_coding	-	-	1	232	0	5.705	0	112.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000056268	Dennd1b	ENSMUST00000199634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056268	Dennd1b	ENSMUST00000094505	ENSMUSP00000092082	TRANSLATION	protein_coding	-	CCDS35728.1	1	691	0	9	0.5	205	0	-4,-6	-	-	3.72	MINOR
ENSMUSG00000056268	Dennd1b	ENSMUST00000196816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056268	Dennd1b	ENSMUST00000198418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039384	Dusp10	ENSMUST00000139839	ENSMUSP00000121433	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039384	Dusp10	ENSMUST00000048655	ENSMUSP00000045838	TRANSLATION	protein_coding	-	CCDS15591.1	1	483	8	3	8.8	192.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000040713	Creg1	ENSMUST00000140769	ENSMUSP00000137087	TRANSLATION	nonsense_mediated_decay	-	-	1	146	0	1	0	61.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000040713	Creg1	ENSMUST00000040298	ENSMUSP00000041234	TRANSLATION	protein_coding	-	-	3	94	0	2	2	104.8	0	-4,-7	-	-	4.104	MINOR
ENSMUSG00000040713	Creg1	ENSMUST00000111432	ENSMUSP00000107060	TRANSLATION	protein_coding	-	CCDS35759.1	1	220	0	3.33	2.7	192.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040865	Ino80d	ENSMUST00000165066	ENSMUSP00000130864	TRANSLATION	protein_coding	-	CCDS48277.1	5	1021	4	0	1.5	126.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040865	Ino80d	ENSMUST00000153992	ENSMUSP00000115332	TRANSLATION	protein_coding	stop	-	1	434	0	0	0	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040865	Ino80d	ENSMUST00000133236	ENSMUSP00000123430	TRANSLATION	nonsense_mediated_decay	-	-	1	916	0	0	1.5	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040865	Ino80d	ENSMUST00000097718	ENSMUSP00000095325	TRANSLATION	protein_coding	-	CCDS35594.1	5	916	0	0	1.5	63.8	0	-4,-7	-	-	2.256	MINOR
ENSMUSG00000040865	Ino80d	ENSMUST00000172416	ENSMUSP00000127378	TRANSLATION	protein_coding	-	CCDS35594.1	5	916	0	0	1.5	63.8	0	-4,-7	-	-	2.256	MINOR
ENSMUSG00000040865	Ino80d	ENSMUST00000188100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040865	Ino80d	ENSMUST00000137511	ENSMUSP00000119118	TRANSLATION	protein_coding	stop	-	1	438	0	0	0	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026248	Mrpl44	ENSMUST00000189176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026248	Mrpl44	ENSMUST00000027464	ENSMUSP00000027464	TRANSLATION	protein_coding	-	CCDS35629.1	1	333	3	4	7.5	0	0	-1,3	-	-	12	PRINCIPAL:1
ENSMUSG00000033849	B3galt2	ENSMUST00000038252	ENSMUSP00000046118	TRANSLATION	protein_coding	-	CCDS15342.1	1	422	0	0	14.8	218.4	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000073658	Crygb	ENSMUST00000027090	ENSMUSP00000027090	TRANSLATION	protein_coding	-	CCDS15013.1	1	175	4	2	8.8	218.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000040225	Prrc2c	ENSMUST00000182308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040225	Prrc2c	ENSMUST00000182149	ENSMUSP00000138548	TRANSLATION	protein_coding	-	-	5	2724	0	0	0.5	181.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000040225	Prrc2c	ENSMUST00000183011	ENSMUSP00000138609	TRANSLATION	protein_coding	stop	-	1	564	0	0	0	162.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040225	Prrc2c	ENSMUST00000182331	ENSMUSP00000138556	TRANSLATION	protein_coding	stop	-	5	149	0	0	0	174.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040225	Prrc2c	ENSMUST00000182593	ENSMUSP00000138674	TRANSLATION	protein_coding	-	-	5	2765	0	0	0.5	170.5	0	-4,-5	-	-	5.364	ALTERNATIVE:2
ENSMUSG00000040225	Prrc2c	ENSMUST00000028016	ENSMUSP00000028016	TRANSLATION	protein_coding	-	-	5	2844	0	0	0.5	170.5	0	-4,-5	-	-	5.364	ALTERNATIVE:2
ENSMUSG00000040225	Prrc2c	ENSMUST00000193937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040225	Prrc2c	ENSMUST00000182393	ENSMUSP00000138451	TRANSLATION	protein_coding	start	-	5	1515	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040225	Prrc2c	ENSMUST00000182288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040225	Prrc2c	ENSMUST00000182448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040225	Prrc2c	ENSMUST00000183286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040225	Prrc2c	ENSMUST00000183223	ENSMUSP00000138698	TRANSLATION	protein_coding	start	-	5	1276	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040225	Prrc2c	ENSMUST00000182535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040225	Prrc2c	ENSMUST00000182660	ENSMUSP00000138433	TRANSLATION	protein_coding	-	CCDS35749.1	5	2846	0	0	0.5	181.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000026393	Nek7	ENSMUST00000187407	ENSMUSP00000140635	TRANSLATION	protein_coding	-	CCDS15332.1	5	302	20	8.25	19.5	218.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026393	Nek7	ENSMUST00000186017	ENSMUSP00000140903	TRANSLATION	protein_coding	-	CCDS15332.1	1	302	20	8.25	19.5	218.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026393	Nek7	ENSMUST00000191549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026393	Nek7	ENSMUST00000027642	ENSMUSP00000027642	TRANSLATION	protein_coding	-	CCDS78695.1	1	201	20	5.25	0.5	138.1	0	-4,-5	-	-	7.2	MINOR
ENSMUSG00000049160	Tex50	ENSMUST00000178511	ENSMUSP00000154579	TRANSLATION	protein_coding	-	-	3	189	0	0	1.5	0	1	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000049160	Tex50	ENSMUST00000135643	ENSMUSP00000154416	TRANSLATION	protein_coding	-	-	2	189	0	0	1.5	0	1	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000037138	Aff3	ENSMUST00000136641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037138	Aff3	ENSMUST00000134963	ENSMUSP00000116289	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037138	Aff3	ENSMUST00000039827	ENSMUSP00000044128	TRANSLATION	protein_coding	-	-	5	1228	0	2.475	0.5	1033	0	-4,-5	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000037138	Aff3	ENSMUST00000027250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037138	Aff3	ENSMUST00000238906	ENSMUSP00000159147	TRANSLATION	protein_coding	-	-	-	1254	0	2.475	0	1034.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037138	Aff3	ENSMUST00000095027	ENSMUSP00000092637	TRANSLATION	protein_coding	-	CCDS69884.1	5	1229	0	2.475	0.5	1034.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000054203	Ifi205	ENSMUST00000192166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054203	Ifi205	ENSMUST00000059226	ENSMUSP00000062409	TRANSLATION	protein_coding	-	CCDS15534.1	1	404	0	3.4	0.5	279.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026568	Mpc2	ENSMUST00000128633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026568	Mpc2	ENSMUST00000193575	ENSMUSP00000142329	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026568	Mpc2	ENSMUST00000027853	ENSMUSP00000027853	TRANSLATION	protein_coding	-	CCDS15442.1	1	127	0	0	12.8	133.9	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000026568	Mpc2	ENSMUST00000138999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026568	Mpc2	ENSMUST00000195026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000154102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033569	Adgrb3	ENSMUST00000153568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000126096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000135518	ENSMUSP00000119804	TRANSLATION	protein_coding	-	CCDS14855.1	5	1522	3	13.485	14.8	567.7	15	-1,-5	-	-	17.89	PRINCIPAL:1
ENSMUSG00000033569	Adgrb3	ENSMUST00000126626	ENSMUSP00000115442	TRANSLATION	protein_coding	-	-	1	652	0	1.645	0	199.7	14	-3,-5	-	-	0	MINOR
ENSMUSG00000033569	Adgrb3	ENSMUST00000190202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000041838	ENSMUSP00000035612	TRANSLATION	protein_coding	-	CCDS14855.1	1	1522	3	13.485	14.8	567.7	15	-1,-5	-	-	17.89	PRINCIPAL:1
ENSMUSG00000033569	Adgrb3	ENSMUST00000189254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000134022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033569	Adgrb3	ENSMUST00000151309	ENSMUSP00000116231	TRANSLATION	protein_coding	-	CCDS14855.1	1	1522	3	13.485	14.8	567.7	15	-1,-5	-	-	17.89	PRINCIPAL:1
ENSMUSG00000033569	Adgrb3	ENSMUST00000146592	ENSMUSP00000116759	TRANSLATION	protein_coding	start	-	1	1282	3	13.985	0	569.5	14	-4,-6	-	-	-1	MINOR
ENSMUSG00000006403	Adamts4	ENSMUST00000111315	ENSMUSP00000106947	TRANSLATION	protein_coding	-	-	1	833	18	6.28	0	229.2	0	-2,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000006403	Adamts4	ENSMUST00000111314	ENSMUSP00000106946	TRANSLATION	protein_coding	-	-	1	648	18	6.28	0	199.7	0	-1,-4	-	-	16.23	MINOR
ENSMUSG00000006403	Adamts4	ENSMUST00000219033	ENSMUSP00000151387	TRANSLATION	protein_coding	-	CCDS15485.1	1	845	18	6.28	0.5	229.2	0	-2,2	-	-	18	PRINCIPAL:2
ENSMUSG00000026124	Cfc1	ENSMUST00000027298	ENSMUSP00000027298	TRANSLATION	protein_coding	-	CCDS14869.1	1	202	4	0	0.5	49.9	0	-3,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000019230	Lhx9	ENSMUST00000194557	ENSMUSP00000142268	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019230	Lhx9	ENSMUST00000112030	ENSMUSP00000107661	TRANSLATION	protein_coding	-	CCDS15333.1	5	321	15	3	4	157.8	0	-4,-6	-	-	15.996	MINOR
ENSMUSG00000019230	Lhx9	ENSMUST00000019374	ENSMUSP00000019374	TRANSLATION	protein_coding	-	CCDS15334.1	1	330	15	3	14.1	157.8	0	-4,-6	-	-	18.82	MINOR
ENSMUSG00000019230	Lhx9	ENSMUST00000112026	ENSMUSP00000107657	TRANSLATION	protein_coding	-	CCDS35726.1	1	397	15	3.6	15.3	185.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000019230	Lhx9	ENSMUST00000192425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019230	Lhx9	ENSMUST00000093486	ENSMUSP00000091198	TRANSLATION	protein_coding	-	CCDS15333.1	1	321	15	3	4	157.8	0	-4,-6	-	-	15.996	MINOR
ENSMUSG00000019230	Lhx9	ENSMUST00000046870	ENSMUSP00000036480	TRANSLATION	protein_coding	-	-	5	388	15	3.6	6.4	185.2	0	-4,-6	-	-	19.512	MINOR
ENSMUSG00000004031	Brinp2	ENSMUST00000194578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004031	Brinp2	ENSMUST00000004133	ENSMUSP00000004133	TRANSLATION	protein_coding	-	CCDS15401.1	1	783	0	0	6.3	28.8	0	0,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000004031	Brinp2	ENSMUST00000195271	ENSMUSP00000141709	TRANSLATION	nonsense_mediated_decay	-	-	2	187	0	0	0	27.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000004031	Brinp2	ENSMUST00000192709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040629	Mael	ENSMUST00000194057	ENSMUSP00000141652	TRANSLATION	protein_coding	-	-	5	420	0	4.28	1.2	243.9	0	-4,-2	-	-	9.333	MINOR
ENSMUSG00000040629	Mael	ENSMUST00000038782	ENSMUSP00000045828	TRANSLATION	protein_coding	-	CCDS15448.1	1	434	0	4.58	7.5	279.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000047067	Dusp28	ENSMUST00000060913	ENSMUSP00000057690	TRANSLATION	protein_coding	-	CCDS15179.1	1	163	8	2	1.5	96.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000041907	Gpr45	ENSMUST00000179766	ENSMUSP00000135986	TRANSLATION	protein_coding	-	CCDS14919.1	1	373	0	0.42	2.7	171.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041907	Gpr45	ENSMUST00000188621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041907	Gpr45	ENSMUST00000187998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041907	Gpr45	ENSMUST00000114761	ENSMUSP00000110409	TRANSLATION	protein_coding	-	CCDS14919.1	-	373	0	0.42	2.7	171.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041907	Gpr45	ENSMUST00000179655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073735	Defb18	ENSMUST00000097818	ENSMUSP00000095427	TRANSLATION	protein_coding	-	CCDS35520.1	1	85	0	0	1.5	25.6	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042751	Nmnat2	ENSMUST00000186621	ENSMUSP00000140497	TRANSLATION	protein_coding	stop	-	3	184	6	3.22	0	41.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042751	Nmnat2	ENSMUST00000190960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042751	Nmnat2	ENSMUST00000186368	ENSMUSP00000140585	TRANSLATION	nonsense_mediated_decay	-	-	1	279	13	5.4	2	87	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042751	Nmnat2	ENSMUST00000187569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042751	Nmnat2	ENSMUST00000185241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042751	Nmnat2	ENSMUST00000043313	ENSMUSP00000041110	TRANSLATION	protein_coding	-	CCDS15368.1	1	307	13	6.1	12.8	87.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000036815	Dpp10	ENSMUST00000239072	ENSMUSP00000159007	TRANSLATION	protein_coding	-	-	-	796	0	20.07	5.1	531.4	1	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000036815	Dpp10	ENSMUST00000140361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036815	Dpp10	ENSMUST00000187202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036815	Dpp10	ENSMUST00000112603	ENSMUSP00000108222	TRANSLATION	protein_coding	-	-	5	789	0	20.07	3.9	531.4	1	-4,-7	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000036815	Dpp10	ENSMUST00000112606	ENSMUSP00000108225	TRANSLATION	protein_coding	-	CCDS15241.2	1	800	0	20.07	3.9	531.4	1	-4,-7	-	-	13.414	PRINCIPAL:2
ENSMUSG00000036815	Dpp10	ENSMUST00000187286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039354	Smarcal1	ENSMUST00000145868	ENSMUSP00000120230	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039354	Smarcal1	ENSMUST00000047615	ENSMUSP00000047589	TRANSLATION	protein_coding	-	CCDS35609.1	1	910	11	7.605	0.5	303	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039354	Smarcal1	ENSMUST00000156797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039354	Smarcal1	ENSMUST00000150725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039354	Smarcal1	ENSMUST00000152225	ENSMUSP00000137833	TRANSLATION	protein_coding	-	CCDS35609.1	1	910	11	7.605	0.5	303	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039354	Smarcal1	ENSMUST00000126832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039354	Smarcal1	ENSMUST00000136498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039354	Smarcal1	ENSMUST00000152814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039354	Smarcal1	ENSMUST00000133123	ENSMUSP00000114848	TRANSLATION	protein_coding	stop	-	3	194	0	0.9	0	117.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026114	Cnga3	ENSMUST00000194195	ENSMUSP00000142075	TRANSLATION	protein_coding	-	CCDS14890.1	5	631	14	2.38	1.5	267.7	3	-4,-6	-	-	17.37	PRINCIPAL:3
ENSMUSG00000026114	Cnga3	ENSMUST00000195272	ENSMUSP00000142175	TRANSLATION	protein_coding	-	CCDS78566.1	5	669	14	2.66	1.5	267.7	3	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000026114	Cnga3	ENSMUST00000027288	ENSMUSP00000027288	TRANSLATION	protein_coding	-	CCDS14890.1	1	631	14	2.38	1.5	267.7	3	-4,-6	-	-	17.37	PRINCIPAL:3
ENSMUSG00000026114	Cnga3	ENSMUST00000191981	ENSMUSP00000142235	TRANSLATION	protein_coding	stop	-	5	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048814	Lonrf2	ENSMUST00000147695	ENSMUSP00000117600	TRANSLATION	protein_coding	-	-	5	754	8	3.39	1.5	147.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048814	Lonrf2	ENSMUST00000039612	ENSMUSP00000047372	TRANSLATION	protein_coding	-	CCDS14900.1	1	518	8	3.09	0.5	120.2	0	-4,-5	-	-	15.786	MINOR
ENSMUSG00000048814	Lonrf2	ENSMUST00000191724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026166	Ccl20	ENSMUST00000186832	ENSMUSP00000139923	TRANSLATION	protein_coding	-	CCDS78638.1	1	96	0	2.08	4.1	77.2	0	3,-2	-	-	12.802	ALTERNATIVE:2
ENSMUSG00000026166	Ccl20	ENSMUST00000113437	ENSMUSP00000109064	TRANSLATION	protein_coding	-	CCDS35632.1	1	97	0	2.08	4.1	77.2	0	3,-2	-	-	12.802	PRINCIPAL:3
ENSMUSG00000026166	Ccl20	ENSMUST00000027351	ENSMUSP00000027351	TRANSLATION	protein_coding	-	-	1	102	0	2.15	0	77.2	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000006576	Slc4a3	ENSMUST00000027415	ENSMUSP00000027415	TRANSLATION	nonsense_mediated_decay	-	-	5	573	0	1.84	0	131.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000145516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006576	Slc4a3	ENSMUST00000124341	ENSMUSP00000116747	TRANSLATION	protein_coding	-	CCDS15080.1	1	1227	0	14.21	1.5	1005	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000006576	Slc4a3	ENSMUST00000189794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006576	Slc4a3	ENSMUST00000138814	ENSMUSP00000122749	TRANSLATION	protein_coding	stop	-	5	95	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000129703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006576	Slc4a3	ENSMUST00000145258	ENSMUSP00000119860	TRANSLATION	nonsense_mediated_decay	start	-	5	207	0	1.84	0	132.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000142257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006576	Slc4a3	ENSMUST00000132110	ENSMUSP00000119942	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0.78	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000154101	ENSMUSP00000116488	TRANSLATION	protein_coding	stop	-	5	227	0	1.8	0	107.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000150142	ENSMUSP00000120078	TRANSLATION	protein_coding	stop	-	2	104	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006576	Slc4a3	ENSMUST00000132612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096968	Gm26620	ENSMUST00000180542	ENSMUSP00000137736	TRANSLATION	protein_coding	-	-	-	116	0	0	0	0	0	-2,2	-	-	0	PRINCIPAL:1
ENSMUSG00000026401	Cd55b	ENSMUST00000112488	ENSMUSP00000108107	TRANSLATION	protein_coding	-	CCDS35699.1	1	400	0	6.52	0.5	169.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026401	Cd55b	ENSMUST00000136497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026401	Cd55b	ENSMUST00000119432	ENSMUSP00000113352	TRANSLATION	protein_coding	-	CCDS83587.1	1	287	0	5.04	0.5	125.1	0	3,-2	-	-	6.396	MINOR
ENSMUSG00000026077	Npas2	ENSMUST00000056815	ENSMUSP00000054719	TRANSLATION	protein_coding	-	CCDS48244.1	1	816	0	9.18	1.5	154.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026077	Npas2	ENSMUST00000173050	ENSMUSP00000134241	TRANSLATION	protein_coding	stop	-	2	60	0	1.33	0	39.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026077	Npas2	ENSMUST00000172825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050788	Olfr419	ENSMUST00000061990	ENSMUSP00000050893	TRANSLATION	protein_coding	-	CCDS15540.1	-	313	0	0.42	7.5	178.6	7	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050788	Olfr419	ENSMUST00000214725	ENSMUSP00000149512	TRANSLATION	protein_coding	-	CCDS15540.1	5	313	0	0.42	7.5	178.6	7	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000055322	Tns1	ENSMUST00000189571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055322	Tns1	ENSMUST00000185529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055322	Tns1	ENSMUST00000188436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055322	Tns1	ENSMUST00000190599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055322	Tns1	ENSMUST00000212888	ENSMUSP00000148638	TRANSLATION	protein_coding	-	-	5	1880	13	13.47	0	310	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000055322	Tns1	ENSMUST00000190389	ENSMUSP00000140448	TRANSLATION	protein_coding	start/stop	-	5	142	0	2.28	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000191527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055322	Tns1	ENSMUST00000187584	ENSMUSP00000140254	TRANSLATION	protein_coding	-	-	5	1823	13	13.47	0	310	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000055322	Tns1	ENSMUST00000185331	ENSMUSP00000140771	TRANSLATION	protein_coding	start	-	5	1705	5	13.27	0	280.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000191367	ENSMUSP00000140991	TRANSLATION	protein_coding	stop	-	2	88	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000185264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055322	Tns1	ENSMUST00000191104	ENSMUSP00000140317	TRANSLATION	protein_coding	-	CCDS48288.2	5	1867	13	13.47	0.5	310	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000055322	Tns1	ENSMUST00000239451	ENSMUSP00000159329	TRANSLATION	protein_coding	-	-	-	1844	13	13.47	0	310	0	0,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000055322	Tns1	ENSMUST00000169786	ENSMUSP00000127715	TRANSLATION	protein_coding	-	CCDS78614.1	5	1888	13	13.47	0.5	310	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000055322	Tns1	ENSMUST00000188942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055322	Tns1	ENSMUST00000187691	ENSMUSP00000139844	TRANSLATION	protein_coding	-	-	1	624	0	7.03	0	168.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000185702	ENSMUSP00000140094	TRANSLATION	protein_coding	start	-	5	1719	5	13.27	0	282	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000191264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055322	Tns1	ENSMUST00000189228	ENSMUSP00000139721	TRANSLATION	protein_coding	start/stop	-	3	149	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000191204	ENSMUSP00000140878	TRANSLATION	protein_coding	start/stop	-	3	172	8	0.95	0	28	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000186381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055322	Tns1	ENSMUST00000188208	ENSMUSP00000140837	TRANSLATION	protein_coding	stop	-	2	118	8	0	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055322	Tns1	ENSMUST00000187281	ENSMUSP00000139616	TRANSLATION	protein_coding	start/stop	-	3	196	1	1.95	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000026504	Sdccag8	ENSMUST00000056773	ENSMUSP00000050667	TRANSLATION	protein_coding	-	-	1	379	0	0	0	521.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026504	Sdccag8	ENSMUST00000133305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026504	Sdccag8	ENSMUST00000150429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026504	Sdccag8	ENSMUST00000027785	ENSMUSP00000027785	TRANSLATION	protein_coding	-	CCDS35798.1	1	717	0	0	2.7	1247.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026504	Sdccag8	ENSMUST00000139589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026504	Sdccag8	ENSMUST00000123409	ENSMUSP00000137948	TRANSLATION	nonsense_mediated_decay	-	-	5	367	0	0	0	628.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045005	Fzd5	ENSMUST00000116133	ENSMUSP00000111828	TRANSLATION	protein_coding	-	CCDS15008.1	1	585	0	0.4	6.3	588.1	6	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000045005	Fzd5	ENSMUST00000063982	ENSMUSP00000067783	TRANSLATION	protein_coding	-	CCDS15008.1	1	585	0	0.4	6.3	588.1	6	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026271	Gpr35	ENSMUST00000189697	ENSMUSP00000139787	TRANSLATION	protein_coding	stop	-	3	147	0	1.4	0	74.6	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000026271	Gpr35	ENSMUST00000064480	ENSMUSP00000070832	TRANSLATION	protein_coding	-	CCDS15182.1	1	307	0	2.28	1.5	115.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026271	Gpr35	ENSMUST00000027489	ENSMUSP00000027489	TRANSLATION	protein_coding	-	-	1	91	0	0.48	0	0	1	4,-1	-	-	1.266	MINOR
ENSMUSG00000026271	Gpr35	ENSMUST00000185421	ENSMUSP00000139817	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026271	Gpr35	ENSMUST00000169198	ENSMUSP00000126914	TRANSLATION	protein_coding	-	CCDS15182.1	1	307	0	2.28	1.5	115.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026271	Gpr35	ENSMUST00000186298	ENSMUSP00000139648	TRANSLATION	protein_coding	-	CCDS15182.1	1	307	0	2.28	1.5	115.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023150	Ivns1abp	ENSMUST00000186745	ENSMUSP00000140708	TRANSLATION	nonsense_mediated_decay	-	-	1	221	0	3.8	1.5	146.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023150	Ivns1abp	ENSMUST00000097543	ENSMUSP00000095150	TRANSLATION	protein_coding	-	CCDS15358.1	1	600	0	7.53	0.5	421.6	0	-4,-5	-	-	9.216	MINOR
ENSMUSG00000023150	Ivns1abp	ENSMUST00000111887	ENSMUSP00000107518	TRANSLATION	protein_coding	-	CCDS35735.1	1	221	0	3.8	1.5	146.7	0	-4,-5	-	-	0.144	MINOR
ENSMUSG00000023150	Ivns1abp	ENSMUST00000023918	ENSMUSP00000023918	TRANSLATION	protein_coding	-	CCDS15359.1	1	642	0	8.33	11.5	441.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023150	Ivns1abp	ENSMUST00000190872	ENSMUSP00000140332	TRANSLATION	protein_coding	start	-	3	77	0	1.33	0	57.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026413	Pkp1	ENSMUST00000189805	ENSMUSP00000140883	TRANSLATION	nonsense_mediated_decay	-	-	5	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026413	Pkp1	ENSMUST00000132793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026413	Pkp1	ENSMUST00000027667	ENSMUSP00000027667	TRANSLATION	protein_coding	-	CCDS15322.1	1	728	0	8.732	8.8	60.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026413	Pkp1	ENSMUST00000163260	ENSMUSP00000128418	TRANSLATION	protein_coding	-	CCDS15322.1	1	728	0	8.732	8.8	60.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026096	Osgepl1	ENSMUST00000135614	ENSMUSP00000137994	TRANSLATION	nonsense_mediated_decay	-	-	1	371	16	3.764	0	263.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026096	Osgepl1	ENSMUST00000150115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026096	Osgepl1	ENSMUST00000151296	ENSMUSP00000137772	TRANSLATION	nonsense_mediated_decay	-	-	1	100	0	0.6	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026096	Osgepl1	ENSMUST00000027265	ENSMUSP00000027265	TRANSLATION	protein_coding	-	CCDS14953.1	1	414	16	3.815	6.3	263.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000026096	Osgepl1	ENSMUST00000135786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026096	Osgepl1	ENSMUST00000114484	ENSMUSP00000110128	TRANSLATION	protein_coding	-	CCDS14953.1	1	414	16	3.815	6.3	263.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000026096	Osgepl1	ENSMUST00000153939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026255	Efhd1	ENSMUST00000150831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026255	Efhd1	ENSMUST00000027472	ENSMUSP00000027472	TRANSLATION	protein_coding	-	CCDS15132.1	1	240	9	2.6	3.9	36.8	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000026255	Efhd1	ENSMUST00000118687	ENSMUSP00000112980	TRANSLATION	nonsense_mediated_decay	-	-	1	240	9	2.6	3.9	36.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000113084	A030003K21Rik	ENSMUST00000222600	ENSMUSP00000152055	TRANSLATION	protein_coding	-	-	-	128	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000114943	Gm8947	ENSMUST00000224330	ENSMUSP00000153233	TRANSLATION	protein_coding	-	-	-	301	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026185	Igfbp5	ENSMUST00000027377	ENSMUSP00000027377	TRANSLATION	protein_coding	-	CCDS15037.1	1	271	0	3	2.8	108.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026185	Igfbp5	ENSMUST00000137339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091937	Gm3646	ENSMUST00000171319	ENSMUSP00000127231	TRANSLATION	protein_coding	-	CCDS56625.1	1	53	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000047528	Flacc1	ENSMUST00000185953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047528	Flacc1	ENSMUST00000191565	ENSMUSP00000139420	TRANSLATION	protein_coding	-	CCDS83544.1	1	423	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000047528	Flacc1	ENSMUST00000191252	ENSMUSP00000140613	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047528	Flacc1	ENSMUST00000188839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047528	Flacc1	ENSMUST00000055313	ENSMUSP00000062497	TRANSLATION	protein_coding	-	CCDS35581.1	1	383	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000047528	Flacc1	ENSMUST00000188772	ENSMUSP00000140780	TRANSLATION	protein_coding	-	-	1	328	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000053461	Hhipl2	ENSMUST00000192527	ENSMUSP00000142121	TRANSLATION	protein_coding	-	CCDS78765.1	1	497	2	3.82	0.5	0	0	-4,-6	-	-	8	MINOR
ENSMUSG00000053461	Hhipl2	ENSMUST00000195809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053461	Hhipl2	ENSMUST00000065900	ENSMUSP00000070719	TRANSLATION	protein_coding	-	CCDS56664.1	5	717	2	3.82	0.5	45	0	-1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000053461	Hhipl2	ENSMUST00000193862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041483	Zfp281	ENSMUST00000112046	ENSMUSP00000107677	TRANSLATION	protein_coding	-	CCDS15327.1	1	893	15	0	0.5	18	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041483	Zfp281	ENSMUST00000047734	ENSMUSP00000039003	TRANSLATION	protein_coding	-	CCDS15327.1	1	893	15	0	0.5	18	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028033	Kcnq5	ENSMUST00000115299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028033	Kcnq5	ENSMUST00000174183	ENSMUSP00000134389	TRANSLATION	nonsense_mediated_decay	-	-	5	172	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000028033	Kcnq5	ENSMUST00000115300	ENSMUSP00000110955	TRANSLATION	protein_coding	-	CCDS48230.1	1	952	0	6.264	1.7	399.9	6	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028033	Kcnq5	ENSMUST00000173058	ENSMUSP00000134166	TRANSLATION	protein_coding	-	-	5	823	0	5.664	1.2	288.7	6	-4,-5	-	-	4.8	MINOR
ENSMUSG00000028033	Kcnq5	ENSMUST00000029667	ENSMUSP00000029667	TRANSLATION	protein_coding	-	CCDS35525.1	1	933	0	6.264	2.9	399.9	6	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028033	Kcnq5	ENSMUST00000173404	ENSMUSP00000134076	TRANSLATION	protein_coding	-	CCDS78554.1	5	924	0	6.066	2.9	399.9	6	-4,-5	-	-	11.604	ALTERNATIVE:2
ENSMUSG00000028033	Kcnq5	ENSMUST00000134505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038179	Slamf7	ENSMUST00000111276	ENSMUSP00000106907	TRANSLATION	protein_coding	-	CCDS15500.1	1	333	0	1.16	0.5	0	2	1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000038179	Slamf7	ENSMUST00000194791	ENSMUSP00000141601	TRANSLATION	protein_coding	-	-	1	281	0	1.16	0	0	2	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000038179	Slamf7	ENSMUST00000192195	ENSMUSP00000141871	TRANSLATION	protein_coding	-	CCDS15500.1	1	333	0	1.16	0.5	0	2	1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000038179	Slamf7	ENSMUST00000192024	ENSMUSP00000141426	TRANSLATION	protein_coding	-	CCDS83636.1	1	294	0	1.16	0.5	0	2	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000038179	Slamf7	ENSMUST00000194531	ENSMUSP00000141259	TRANSLATION	protein_coding	-	-	1	335	0	1.16	0.5	0	2	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000048865	Arhgap30	ENSMUST00000056449	ENSMUSP00000059389	TRANSLATION	protein_coding	-	CCDS15494.1	1	1093	0	5.75	0.5	147.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048865	Arhgap30	ENSMUST00000135312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048865	Arhgap30	ENSMUST00000131607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048865	Arhgap30	ENSMUST00000194914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000162681	ENSMUSP00000125133	TRANSLATION	protein_coding	start	-	3	189	1	3	0	24.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026335	Pam	ENSMUST00000161071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000162803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000160210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026335	Pam	ENSMUST00000159131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000159041	ENSMUSP00000124284	TRANSLATION	protein_coding	start	-	3	150	2	4.132	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026335	Pam	ENSMUST00000159841	ENSMUSP00000124479	TRANSLATION	protein_coding	start	-	5	169	0	1.5	0	44.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026335	Pam	ENSMUST00000159585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000058762	ENSMUSP00000057112	TRANSLATION	protein_coding	-	-	1	979	10	17.75	0.5	310.3	1	4,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026335	Pam	ENSMUST00000186731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000159428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026335	Pam	ENSMUST00000097625	ENSMUSP00000095228	TRANSLATION	protein_coding	-	CCDS48331.1	5	978	10	17.75	0.5	310.3	1	4,2	-	-	18	PRINCIPAL:2
ENSMUSG00000026335	Pam	ENSMUST00000163007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026335	Pam	ENSMUST00000161567	ENSMUSP00000125418	TRANSLATION	protein_coding	-	-	5	873	10	17.75	0.5	310.3	1	4,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026335	Pam	ENSMUST00000162426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041559	Fmod	ENSMUST00000048183	ENSMUSP00000035489	TRANSLATION	protein_coding	-	CCDS15301.1	1	376	0	3	7.5	149.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000041559	Fmod	ENSMUST00000162779	ENSMUSP00000124896	TRANSLATION	protein_coding	stop	-	3	83	0	1	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000004707	Ly9	ENSMUST00000111277	ENSMUSP00000106908	TRANSLATION	protein_coding	-	-	1	636	0	2.06	0	31.9	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000004707	Ly9	ENSMUST00000068878	ENSMUSP00000069319	TRANSLATION	protein_coding	-	CCDS35779.1	1	654	0	2.06	0.5	31.9	1	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000004707	Ly9	ENSMUST00000004827	ENSMUSP00000004827	TRANSLATION	protein_coding	-	CCDS69978.1	1	544	0	1.58	0.5	31.9	1	-4,-7	-	-	10.602	MINOR
ENSMUSG00000004707	Ly9	ENSMUST00000146596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004707	Ly9	ENSMUST00000143463	ENSMUSP00000137924	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038496	Slc19a3	ENSMUST00000142805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038496	Slc19a3	ENSMUST00000164473	ENSMUSP00000126646	TRANSLATION	protein_coding	-	CCDS15101.1	1	488	0	0	0.5	583.3	9	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000038496	Slc19a3	ENSMUST00000045560	ENSMUSP00000041683	TRANSLATION	protein_coding	-	CCDS15101.1	1	488	0	0	0.5	583.3	9	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000026594	Ralgps2	ENSMUST00000189208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026594	Ralgps2	ENSMUST00000185198	ENSMUSP00000139618	TRANSLATION	protein_coding	-	-	1	568	0	10.65	0	178.6	0	-4,-5	-	-	7.224	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000191605	ENSMUSP00000139645	TRANSLATION	protein_coding	-	CCDS15396.1	1	590	0	11.98	0.5	213.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026594	Ralgps2	ENSMUST00000063199	ENSMUSP00000063872	TRANSLATION	protein_coding	-	CCDS15396.1	1	590	0	11.98	0.5	213.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026594	Ralgps2	ENSMUST00000172057	ENSMUSP00000132533	TRANSLATION	protein_coding	-	CCDS48405.1	1	555	0	10.98	0.5	210.2	0	-4,-6	-	-	9.78	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000188656	ENSMUSP00000140342	TRANSLATION	protein_coding	-	-	1	489	0	8.65	0	178.6	0	-4,-5	-	-	3.882	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000171292	ENSMUSP00000130581	TRANSLATION	protein_coding	-	CCDS15396.1	5	590	0	11.98	0.5	213.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026594	Ralgps2	ENSMUST00000189316	ENSMUSP00000140230	TRANSLATION	protein_coding	-	-	1	523	0	9.716	0	178.6	0	-4,-5	-	-	5.352	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000027886	ENSMUSP00000027886	TRANSLATION	protein_coding	-	CCDS48406.1	1	564	0	11.98	0.5	213.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026594	Ralgps2	ENSMUST00000189648	ENSMUSP00000140108	TRANSLATION	protein_coding	stop	-	3	67	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000190762	ENSMUSP00000139822	TRANSLATION	protein_coding	stop	-	5	128	0	3	0	62.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000192343	ENSMUSP00000142004	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026594	Ralgps2	ENSMUST00000185970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026594	Ralgps2	ENSMUST00000191503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026594	Ralgps2	ENSMUST00000190648	ENSMUSP00000140055	TRANSLATION	protein_coding	-	-	1	463	0	8.65	0	178.6	0	-4,-5	-	-	3.882	MINOR
ENSMUSG00000052423	B4galt3	ENSMUST00000126699	ENSMUSP00000141958	TRANSLATION	protein_coding	-	-	5	173	8	3.26	0	98.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052423	B4galt3	ENSMUST00000111313	ENSMUSP00000106945	TRANSLATION	protein_coding	-	CCDS15486.1	1	395	17	6.61	6.3	293	2	-1,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000052423	B4galt3	ENSMUST00000151863	ENSMUSP00000142114	TRANSLATION	protein_coding	stop	-	5	13	1	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052423	B4galt3	ENSMUST00000125939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052423	B4galt3	ENSMUST00000064272	ENSMUSP00000066353	TRANSLATION	protein_coding	-	CCDS15486.1	1	395	17	6.61	6.3	293	2	-1,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000052423	B4galt3	ENSMUST00000138904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052423	B4galt3	ENSMUST00000132890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052423	B4galt3	ENSMUST00000141999	ENSMUSP00000114926	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000052423	B4galt3	ENSMUST00000123954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052423	B4galt3	ENSMUST00000141114	ENSMUSP00000114560	TRANSLATION	protein_coding	stop	-	3	139	0	1.35	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000052423	B4galt3	ENSMUST00000129985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026609	Ush2a	ENSMUST00000060479	ENSMUSP00000050454	TRANSLATION	protein_coding	-	CCDS15607.1	1	5193	0	13.88	0.5	996.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026609	Ush2a	ENSMUST00000124358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026609	Ush2a	ENSMUST00000142159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026609	Ush2a	ENSMUST00000142189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026609	Ush2a	ENSMUST00000127077	ENSMUSP00000121033	TRANSLATION	protein_coding	start	-	5	237	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026620	Mark1	ENSMUST00000027929	ENSMUSP00000027929	TRANSLATION	protein_coding	-	CCDS35817.1	1	795	18	9.16	11.6	356.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026620	Mark1	ENSMUST00000192657	ENSMUSP00000142314	TRANSLATION	protein_coding	stop	-	5	153	10	3.33	0	187.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025912	Mybl1	ENSMUST00000088658	ENSMUSP00000086034	TRANSLATION	protein_coding	-	CCDS35510.1	1	751	0	3.55	7.5	554.8	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025912	Mybl1	ENSMUST00000160022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025912	Mybl1	ENSMUST00000115468	ENSMUSP00000111128	TRANSLATION	protein_coding	-	CCDS69861.1	5	691	0	3.55	7.5	554.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000025912	Mybl1	ENSMUST00000188212	ENSMUSP00000139818	TRANSLATION	protein_coding	start/stop	-	5	267	0	3.55	0	226.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025912	Mybl1	ENSMUST00000160451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025961	4933402D24Rik	ENSMUST00000027102	ENSMUSP00000027102	TRANSLATION	protein_coding	-	CCDS56630.1	1	167	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000026199	Ankzf1	ENSMUST00000131788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026199	Ankzf1	ENSMUST00000152233	ENSMUSP00000136163	TRANSLATION	protein_coding	-	CCDS56632.1	1	748	8	1.55	0.5	20.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026199	Ankzf1	ENSMUST00000151887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026199	Ankzf1	ENSMUST00000134233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026199	Ankzf1	ENSMUST00000127625	ENSMUSP00000137179	TRANSLATION	protein_coding	-	-	5	225	4	0	0	0	0	-4,-7	-	-	3	MINOR
ENSMUSG00000026199	Ankzf1	ENSMUST00000145459	ENSMUSP00000135971	TRANSLATION	nonsense_mediated_decay	-	-	1	287	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026199	Ankzf1	ENSMUST00000127860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026199	Ankzf1	ENSMUST00000134378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026170	Cyp27a1	ENSMUST00000027356	ENSMUSP00000027356	TRANSLATION	protein_coding	-	CCDS15054.1	1	533	29	5.92	1.5	354.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000026170	Cyp27a1	ENSMUST00000190781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026170	Cyp27a1	ENSMUST00000189083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026670	Uap1	ENSMUST00000160848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026670	Uap1	ENSMUST00000161112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026670	Uap1	ENSMUST00000161492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026670	Uap1	ENSMUST00000162253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026670	Uap1	ENSMUST00000191690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026670	Uap1	ENSMUST00000111351	ENSMUSP00000106983	TRANSLATION	protein_coding	-	CCDS83632.1	1	522	21	9.25	7.6	293.3	0	-4,-5	-	-	20.898	ALTERNATIVE:1
ENSMUSG00000026670	Uap1	ENSMUST00000111350	ENSMUSP00000106982	TRANSLATION	protein_coding	-	CCDS83631.1	1	505	21	8.75	7.6	295	0	-4,-5	-	-	19.998	ALTERNATIVE:1
ENSMUSG00000026670	Uap1	ENSMUST00000027981	ENSMUSP00000027981	TRANSLATION	protein_coding	-	CCDS15467.1	1	521	21	9.15	7.6	294.8	0	-4,-5	-	-	20.79	PRINCIPAL:3
ENSMUSG00000026670	Uap1	ENSMUST00000191797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040596	Pogk	ENSMUST00000128861	ENSMUSP00000118270	TRANSLATION	protein_coding	-	CCDS35762.1	1	614	0	0.8	1.5	346	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000040596	Pogk	ENSMUST00000131487	ENSMUSP00000116477	TRANSLATION	protein_coding	-	CCDS35762.1	1	614	0	0.8	1.5	346	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000040596	Pogk	ENSMUST00000148243	ENSMUSP00000118877	TRANSLATION	nonsense_mediated_decay	-	-	1	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040596	Pogk	ENSMUST00000127596	ENSMUSP00000120963	TRANSLATION	protein_coding	-	-	3	117	0	0.8	0	63.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000040596	Pogk	ENSMUST00000169324	ENSMUSP00000127395	TRANSLATION	protein_coding	-	CCDS48432.1	3	626	0	0.8	0.5	346	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000040596	Pogk	ENSMUST00000135673	ENSMUSP00000120352	TRANSLATION	protein_coding	-	CCDS48432.1	1	626	0	0.8	0.5	346	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000052748	Swt1	ENSMUST00000064771	ENSMUSP00000067516	TRANSLATION	protein_coding	-	CCDS15360.1	1	907	0	1.72	0.5	101	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052748	Swt1	ENSMUST00000138095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052748	Swt1	ENSMUST00000124880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052748	Swt1	ENSMUST00000141977	ENSMUSP00000117424	TRANSLATION	protein_coding	start/stop	-	3	174	0	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052748	Swt1	ENSMUST00000111883	ENSMUSP00000107514	TRANSLATION	nonsense_mediated_decay	-	-	2	679	0	1.72	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052748	Swt1	ENSMUST00000129939	ENSMUSP00000120483	TRANSLATION	protein_coding	start/stop	-	5	251	0	1.27	0	69.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052748	Swt1	ENSMUST00000189595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052748	Swt1	ENSMUST00000131312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052748	Swt1	ENSMUST00000139244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052748	Swt1	ENSMUST00000185247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026356	Dars	ENSMUST00000064309	ENSMUSP00000066866	TRANSLATION	protein_coding	-	CCDS48348.1	1	87	0	2.5	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026356	Dars	ENSMUST00000186398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026356	Dars	ENSMUST00000027602	ENSMUSP00000027602	TRANSLATION	protein_coding	-	CCDS15253.1	1	501	14	13.75	8.8	302.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000043282	Teddm1b	ENSMUST00000055314	ENSMUSP00000058437	TRANSLATION	protein_coding	-	CCDS15379.1	-	306	0	0	3.9	82.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000034220	Gpc1	ENSMUST00000191373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034220	Gpc1	ENSMUST00000190586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034220	Gpc1	ENSMUST00000190215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034220	Gpc1	ENSMUST00000190677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034220	Gpc1	ENSMUST00000045970	ENSMUSP00000047199	TRANSLATION	protein_coding	-	CCDS15177.1	1	557	0	9	3.9	748.5	0	4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000073725	Lmbrd1	ENSMUST00000190195	ENSMUSP00000140516	TRANSLATION	protein_coding	start	-	2	143	0	0	0	0	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000073725	Lmbrd1	ENSMUST00000095062	ENSMUSP00000092672	TRANSLATION	protein_coding	-	CCDS78556.1	1	467	0	0	1.7	55.9	9	-4,-7	-	-	4.206	MINOR
ENSMUSG00000073725	Lmbrd1	ENSMUST00000187468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073725	Lmbrd1	ENSMUST00000186096	ENSMUSP00000140911	TRANSLATION	protein_coding	-	-	2	161	0	0	0	52.1	6	-1,-5	-	-	3.918	MINOR
ENSMUSG00000073725	Lmbrd1	ENSMUST00000186190	ENSMUSP00000139893	TRANSLATION	protein_coding	stop	-	3	143	0	0	0	31.5	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000073725	Lmbrd1	ENSMUST00000191471	ENSMUSP00000140783	TRANSLATION	protein_coding	-	CCDS35528.1	1	537	0	0	1.5	79.8	11	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043263	Ifi209	ENSMUST00000056071	ENSMUSP00000061900	TRANSLATION	protein_coding	-	CCDS35791.1	1	420	0	3.33	0.5	286.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043263	Ifi209	ENSMUST00000193727	ENSMUSP00000142161	TRANSLATION	nonsense_mediated_decay	-	-	2	213	0	1	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026497	Mixl1	ENSMUST00000027778	ENSMUSP00000027778	TRANSLATION	protein_coding	-	CCDS15571.1	1	231	0	0.8	1.5	71.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050711	Scg2	ENSMUST00000049972	ENSMUSP00000062556	TRANSLATION	protein_coding	-	CCDS15089.1	2	617	0	0	2.7	771	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000050711	Scg2	ENSMUST00000185234	ENSMUSP00000139740	TRANSLATION	protein_coding	-	CCDS78625.1	1	577	0	0	1.5	395.9	0	4,-1	-	-	0	MINOR
ENSMUSG00000009772	Nuak2	ENSMUST00000082125	ENSMUSP00000080769	TRANSLATION	protein_coding	-	CCDS15283.1	1	631	18	5.15	1.5	254.1	0	-4,-7	-	-	17.844	PRINCIPAL:3
ENSMUSG00000009772	Nuak2	ENSMUST00000133246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009772	Nuak2	ENSMUST00000072177	ENSMUSP00000072039	TRANSLATION	protein_coding	-	CCDS56642.1	1	639	18	5.2292	0.5	243	0	-4,-7	-	-	17.334	ALTERNATIVE:2
ENSMUSG00000009772	Nuak2	ENSMUST00000128661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002881	Nab1	ENSMUST00000167732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002881	Nab1	ENSMUST00000170269	ENSMUSP00000131239	TRANSLATION	protein_coding	-	-	5	456	0	1.6	2.4	439.7	0	-4,-5	-	-	8.688	MINOR
ENSMUSG00000002881	Nab1	ENSMUST00000186764	ENSMUSP00000141191	TRANSLATION	protein_coding	-	-	5	485	0	1.6	6.3	499.5	0	-4,-5	-	-	13.748	ALTERNATIVE:1
ENSMUSG00000002881	Nab1	ENSMUST00000168082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002881	Nab1	ENSMUST00000069792	ENSMUSP00000066696	TRANSLATION	protein_coding	-	CCDS14944.1	1	486	0	1.6	6.3	503.7	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000025917	Cops5	ENSMUST00000150509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025917	Cops5	ENSMUST00000186528	ENSMUSP00000140633	TRANSLATION	nonsense_mediated_decay	-	-	2	48	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025917	Cops5	ENSMUST00000191296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025917	Cops5	ENSMUST00000188619	ENSMUSP00000140115	TRANSLATION	protein_coding	stop	-	5	210	3	4.33	0	117.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025917	Cops5	ENSMUST00000190155	ENSMUSP00000140054	TRANSLATION	nonsense_mediated_decay	start	-	3	147	3	2.75	0	112.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025917	Cops5	ENSMUST00000139578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025917	Cops5	ENSMUST00000027050	ENSMUSP00000027050	TRANSLATION	protein_coding	-	CCDS14818.1	1	334	3	8.16	15.5	117.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000045174	Amer3	ENSMUST00000052670	ENSMUSP00000054748	TRANSLATION	protein_coding	-	CCDS14871.1	1	780	0	0	0.5	119.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026627	Pacc1	ENSMUST00000027940	ENSMUSP00000027940	TRANSLATION	protein_coding	-	CCDS15619.1	1	350	0	0	7.5	562.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000070501	Ifi214	ENSMUST00000097463	ENSMUSP00000095071	TRANSLATION	nonsense_mediated_decay	-	-	2	213	0	1	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070501	Ifi214	ENSMUST00000090406	ENSMUSP00000087888	TRANSLATION	nonsense_mediated_decay	-	-	1	393	0	3	0	269.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070501	Ifi214	ENSMUST00000195022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070501	Ifi214	ENSMUST00000139092	ENSMUSP00000115105	TRANSLATION	protein_coding	-	CCDS35790.2	1	219	0	1	0.5	43.3	0	-4,-5	-	-	1.998	PRINCIPAL:1
ENSMUSG00000040648	Ppip5k2	ENSMUST00000191556	ENSMUSP00000139980	TRANSLATION	protein_coding	start	-	5	92	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040648	Ppip5k2	ENSMUST00000112845	ENSMUSP00000108466	TRANSLATION	protein_coding	-	-	5	1242	24	7.75	4.8	460.4	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000040648	Ppip5k2	ENSMUST00000137758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040648	Ppip5k2	ENSMUST00000189992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040648	Ppip5k2	ENSMUST00000042509	ENSMUSP00000043401	TRANSLATION	protein_coding	-	CCDS35678.2	1	1129	24	7.75	1.7	460.4	0	-4,-5	-	-	18.184	PRINCIPAL:2
ENSMUSG00000040648	Ppip5k2	ENSMUST00000171129	ENSMUSP00000132889	TRANSLATION	protein_coding	-	-	1	1123	24	7.75	4.8	460.4	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000040648	Ppip5k2	ENSMUST00000152788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012187	Mogat1	ENSMUST00000113524	ENSMUSP00000109152	TRANSLATION	protein_coding	-	CCDS15085.1	5	335	0	0	0.5	380.5	2	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000012187	Mogat1	ENSMUST00000012331	ENSMUSP00000012331	TRANSLATION	protein_coding	-	CCDS15085.1	1	335	0	0	0.5	380.5	2	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000012187	Mogat1	ENSMUST00000125458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012187	Mogat1	ENSMUST00000152111	ENSMUSP00000123427	TRANSLATION	protein_coding	stop	-	2	82	0	0	0	28.5	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000012187	Mogat1	ENSMUST00000134947	ENSMUSP00000116178	TRANSLATION	protein_coding	stop	-	5	201	0	0	0	178.9	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000012187	Mogat1	ENSMUST00000149732	ENSMUSP00000117903	TRANSLATION	protein_coding	stop	-	3	247	0	0	0	294.2	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000160077	ENSMUSP00000141934	TRANSLATION	protein_coding	stop	-	3	163	0	0	0	105	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000191613	ENSMUSP00000141799	TRANSLATION	protein_coding	stop	-	2	70	0	0	0	45.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000110831	ENSMUSP00000106455	TRANSLATION	protein_coding	-	CCDS15633.1	1	263	0	0	2.7	243.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000160822	ENSMUSP00000124546	TRANSLATION	protein_coding	-	CCDS15633.1	2	263	0	0	2.7	243.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000193307	ENSMUSP00000142273	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	55.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000178744	ENSMUSP00000136653	TRANSLATION	protein_coding	-	CCDS15633.1	2	263	0	0	2.7	243.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000192189	ENSMUSP00000142222	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000079144	A130010J15Rik	ENSMUST00000161235	ENSMUSP00000124191	TRANSLATION	protein_coding	-	CCDS15633.1	1	263	0	0	2.7	243.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000067750	Khdc1a	ENSMUST00000088407	ENSMUSP00000085749	TRANSLATION	protein_coding	-	CCDS14848.1	1	166	0	0	0.5	79.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025946	Pth2r	ENSMUST00000027083	ENSMUSP00000027083	TRANSLATION	protein_coding	-	CCDS15017.1	1	546	0	7.37	1.5	346.9	6	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000025946	Pth2r	ENSMUST00000140190	ENSMUSP00000114594	TRANSLATION	protein_coding	stop	-	3	174	0	2.64	0	108.9	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000050840	Cdh20	ENSMUST00000062528	ENSMUSP00000052078	TRANSLATION	protein_coding	-	CCDS15203.1	1	801	52	8.86	5.1	436.5	0	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000070565	Rasal2	ENSMUST00000134543	ENSMUSP00000119623	TRANSLATION	protein_coding	stop	-	3	176	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070565	Rasal2	ENSMUST00000143358	ENSMUSP00000116974	TRANSLATION	protein_coding	stop	-	5	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070565	Rasal2	ENSMUST00000078308	ENSMUSP00000077423	TRANSLATION	protein_coding	-	CCDS48408.1	1	1286	0	7.835	8.8	760.5	0	-4,-6	-	-	14.67	PRINCIPAL:1
ENSMUSG00000070565	Rasal2	ENSMUST00000143080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070565	Rasal2	ENSMUST00000128538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070565	Rasal2	ENSMUST00000132699	ENSMUSP00000114964	TRANSLATION	protein_coding	-	-	5	1261	0	8	0	760.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000070565	Rasal2	ENSMUST00000129880	ENSMUSP00000118367	TRANSLATION	protein_coding	stop	-	5	323	0	1.3	0	25	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038768	9130409I23Rik	ENSMUST00000036819	ENSMUSP00000042889	TRANSLATION	protein_coding	-	CCDS35809.1	1	320	0	0	0.5	127.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025964	Adam23	ENSMUST00000114101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000190658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025964	Adam23	ENSMUST00000134704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000097717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025964	Adam23	ENSMUST00000182642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000114107	ENSMUSP00000109742	TRANSLATION	protein_coding	-	-	5	829	14	12.54	2.7	472.2	1	-3,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000025964	Adam23	ENSMUST00000187844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000114103	ENSMUSP00000139862	TRANSLATION	protein_coding	-	-	5	829	14	12.54	2.7	472.2	0	-3,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000025964	Adam23	ENSMUST00000141545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000087374	ENSMUSP00000084633	TRANSLATION	protein_coding	-	CCDS14999.1	1	829	14	12.54	2.7	472.2	1	-3,0	-	-	18	PRINCIPAL:2
ENSMUSG00000025964	Adam23	ENSMUST00000146403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025964	Adam23	ENSMUST00000185616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026499	Acbd3	ENSMUST00000192420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026499	Acbd3	ENSMUST00000027780	ENSMUSP00000027780	TRANSLATION	protein_coding	-	CCDS15572.1	1	525	0	4.36	1.5	285.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026072	Il1r1	ENSMUST00000114795	ENSMUSP00000110443	TRANSLATION	protein_coding	-	CCDS48246.1	1	573	0	7.37	1.5	164.7	1	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000026072	Il1r1	ENSMUST00000195402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026072	Il1r1	ENSMUST00000027241	ENSMUSP00000027241	TRANSLATION	protein_coding	-	CCDS35547.1	1	576	0	7.37	1.5	164.7	1	2,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000067071	Hes6	ENSMUST00000132188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067071	Hes6	ENSMUST00000086851	ENSMUSP00000084062	TRANSLATION	protein_coding	-	CCDS15163.1	1	224	0	1.05	6.3	78	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000067071	Hes6	ENSMUST00000150520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067071	Hes6	ENSMUST00000126136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067071	Hes6	ENSMUST00000155752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060985	Tdrd5	ENSMUST00000193755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060985	Tdrd5	ENSMUST00000141760	ENSMUSP00000137156	TRANSLATION	protein_coding	stop	-	3	195	0	1.8	0	40.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060985	Tdrd5	ENSMUST00000167528	ENSMUSP00000137182	TRANSLATION	protein_coding	-	-	5	963	0	3.91	0.5	145.9	0	-4,-5	-	-	10.068	MINOR
ENSMUSG00000060985	Tdrd5	ENSMUST00000148277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060985	Tdrd5	ENSMUST00000121146	ENSMUSP00000137298	TRANSLATION	protein_coding	-	CCDS56647.1	1	1040	0	3.91	0.5	178.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032968	Inha	ENSMUST00000037330	ENSMUSP00000040310	TRANSLATION	protein_coding	-	CCDS15078.1	1	366	0	0.2	1.5	54.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036766	Dner	ENSMUST00000191546	ENSMUSP00000140662	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036766	Dner	ENSMUST00000185606	ENSMUSP00000140986	TRANSLATION	protein_coding	stop	-	3	175	3	0.48	0	22.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036766	Dner	ENSMUST00000191306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036766	Dner	ENSMUST00000049126	ENSMUSP00000042927	TRANSLATION	protein_coding	-	CCDS15105.1	1	737	14	5.84	2.9	210.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040918	Slc19a2	ENSMUST00000159230	ENSMUSP00000123870	TRANSLATION	protein_coding	-	CCDS69968.1	1	460	0	0	0.5	564.8	14	-4,0	-	-	4.476	MINOR
ENSMUSG00000040918	Slc19a2	ENSMUST00000044021	ENSMUSP00000037561	TRANSLATION	protein_coding	-	CCDS15433.1	1	498	0	0	6.3	590.2	14	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000040918	Slc19a2	ENSMUST00000160773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040918	Slc19a2	ENSMUST00000169394	ENSMUSP00000131327	TRANSLATION	protein_coding	-	-	5	297	0	0	2.4	263.2	9	-4,0	-	-	0.528	MINOR
ENSMUSG00000026596	Abl2	ENSMUST00000166172	ENSMUSP00000126181	TRANSLATION	protein_coding	-	CCDS48404.1	1	1078	16	9.9	6.3	555.1	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000026596	Abl2	ENSMUST00000027888	ENSMUSP00000027888	TRANSLATION	protein_coding	-	CCDS15393.1	1	1182	16	9.9	5.1	555.1	0	-4,-7	-	-	19.548	PRINCIPAL:3
ENSMUSG00000026596	Abl2	ENSMUST00000173929	ENSMUSP00000133381	TRANSLATION	protein_coding	stop	-	3	139	0	2.15	0	49.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026596	Abl2	ENSMUST00000190749	ENSMUSP00000140125	TRANSLATION	protein_coding	start/stop	-	3	269	0	3.75	0	135.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000113233	ENSMUSP00000108859	TRANSLATION	protein_coding	-	CCDS35652.1	1	245	0	5.08	7.8	203.2	0	-4,-5	-	-	13.944	ALTERNATIVE:1
ENSMUSG00000026254	Eif4e2	ENSMUST00000050876	ENSMUSP00000053403	TRANSLATION	protein_coding	-	-	5	259	0	4.33	0.5	203.2	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000123735	ENSMUSP00000137771	TRANSLATION	protein_coding	stop	-	5	128	0	2.33	0	98.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000076362	ENSMUSP00000075699	TRANSLATION	protein_coding	-	CCDS15130.1	1	234	0	4.73	11.5	203.2	0	-4,-5	-	-	14.298	PRINCIPAL:3
ENSMUSG00000026254	Eif4e2	ENSMUST00000113235	ENSMUSP00000108861	TRANSLATION	protein_coding	-	CCDS83571.1	5	236	0	4.51	7.3	203.2	0	-4,-5	-	-	12.66	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000113230	ENSMUSP00000108856	TRANSLATION	protein_coding	-	-	1	228	0	4.33	0	203.2	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000113232	ENSMUSP00000108858	TRANSLATION	protein_coding	-	-	1	233	0	4.33	0	203.2	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000026254	Eif4e2	ENSMUST00000113231	ENSMUSP00000108857	TRANSLATION	protein_coding	-	CCDS15131.1	1	240	0	5.08	2.9	203.2	0	-4,-5	-	-	12.543	MINOR
ENSMUSG00000102483	Catspere1	ENSMUST00000194528	ENSMUSP00000159061	TRANSLATION	protein_coding	-	-	-	956	0	0	0	105.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042349	Ikbke	ENSMUST00000161764	ENSMUSP00000124190	TRANSLATION	protein_coding	-	-	1	693	12	12.08	0	100.3	0	-4,-5	-	-	12.402	MINOR
ENSMUSG00000042349	Ikbke	ENSMUST00000163029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042349	Ikbke	ENSMUST00000062108	ENSMUSP00000054126	TRANSLATION	protein_coding	-	CCDS15269.1	1	717	13	12.83	1.5	157.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000042349	Ikbke	ENSMUST00000160748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042349	Ikbke	ENSMUST00000162285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042349	Ikbke	ENSMUST00000159195	ENSMUSP00000124486	TRANSLATION	protein_coding	stop	-	3	130	13	3.58	0	75.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042349	Ikbke	ENSMUST00000162437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026611	Spata17	ENSMUST00000110945	ENSMUSP00000106570	TRANSLATION	protein_coding	-	CCDS48479.1	1	192	0	0	0.5	53.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000026611	Spata17	ENSMUST00000183819	ENSMUSP00000138855	TRANSLATION	protein_coding	-	CCDS15604.1	5	379	0	0	0.5	53.5	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000026611	Spata17	ENSMUST00000027908	ENSMUSP00000027908	TRANSLATION	protein_coding	-	CCDS15604.1	2	379	0	0	0.5	53.5	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000026611	Spata17	ENSMUST00000183931	ENSMUSP00000139329	TRANSLATION	protein_coding	stop	-	5	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026611	Spata17	ENSMUST00000183469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026611	Spata17	ENSMUST00000183656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026611	Spata17	ENSMUST00000183996	ENSMUSP00000139073	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026611	Spata17	ENSMUST00000184543	ENSMUSP00000139009	TRANSLATION	protein_coding	-	-	1	40	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026174	Cnot9	ENSMUST00000147810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026174	Cnot9	ENSMUST00000087215	ENSMUSP00000084466	TRANSLATION	protein_coding	-	CCDS35615.1	1	299	0	7	19.5	453.3	0	-1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000026174	Cnot9	ENSMUST00000137100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022995	Enah	ENSMUST00000177811	ENSMUSP00000136863	TRANSLATION	protein_coding	-	-	5	789	0	3.764	0.5	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000193074	ENSMUSP00000141936	TRANSLATION	protein_coding	-	-	5	524	0	3.764	0	198	0	-4,-6	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000111024	ENSMUSP00000106653	TRANSLATION	protein_coding	-	-	5	562	0	3.764	0	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000191649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000111025	ENSMUSP00000106654	TRANSLATION	protein_coding	-	-	5	507	0	3.764	0	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000111030	ENSMUSP00000106659	TRANSLATION	protein_coding	-	CCDS48474.1	1	789	0	3.764	0.5	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000192497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000193703	ENSMUSP00000141462	TRANSLATION	protein_coding	-	CCDS78764.1	1	541	0	3.764	0.5	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000192768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000192967	ENSMUSP00000141330	TRANSLATION	protein_coding	start/stop	-	3	229	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022995	Enah	ENSMUST00000195703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000195461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000195788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000195059	ENSMUSP00000141344	TRANSLATION	protein_coding	-	CCDS48473.1	1	785	0	3.764	0.5	198	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000022995	Enah	ENSMUST00000195840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022995	Enah	ENSMUST00000078719	ENSMUSP00000077781	TRANSLATION	protein_coding	-	CCDS35811.1	1	804	0	3.964	0.5	198	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026519	Tmem63a	ENSMUST00000162283	ENSMUSP00000125287	TRANSLATION	nonsense_mediated_decay	-	-	3	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026519	Tmem63a	ENSMUST00000159436	ENSMUSP00000125192	TRANSLATION	protein_coding	stop	-	5	174	0	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000026519	Tmem63a	ENSMUST00000161523	ENSMUSP00000124021	TRANSLATION	protein_coding	-	CCDS15578.1	1	804	0	0	6.3	330.3	11	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000026519	Tmem63a	ENSMUST00000160508	ENSMUSP00000124973	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026519	Tmem63a	ENSMUST00000161942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026519	Tmem63a	ENSMUST00000161847	ENSMUSP00000124937	TRANSLATION	protein_coding	stop	-	2	102	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026519	Tmem63a	ENSMUST00000160536	ENSMUSP00000124860	TRANSLATION	protein_coding	stop	-	5	70	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000026519	Tmem63a	ENSMUST00000027800	ENSMUSP00000027800	TRANSLATION	protein_coding	-	CCDS15578.1	1	804	0	0	6.3	330.3	11	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000025950	Idh1	ENSMUST00000186222	ENSMUSP00000140694	TRANSLATION	protein_coding	stop	-	3	84	6	2.25	0	46.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025950	Idh1	ENSMUST00000191459	ENSMUSP00000139430	TRANSLATION	protein_coding	stop	-	2	19	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025950	Idh1	ENSMUST00000097709	ENSMUSP00000095316	TRANSLATION	protein_coding	-	CCDS15016.1	1	414	34	10.33	10.8	263.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025950	Idh1	ENSMUST00000149310	ENSMUSP00000117853	TRANSLATION	protein_coding	stop	-	5	143	12	3.25	0	86.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025950	Idh1	ENSMUST00000188876	ENSMUSP00000139906	TRANSLATION	protein_coding	stop	-	5	187	12	5.08	0	87.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025950	Idh1	ENSMUST00000188109	ENSMUSP00000140757	TRANSLATION	protein_coding	stop	-	3	202	12	5.58	0	96.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025950	Idh1	ENSMUST00000169032	ENSMUSP00000127307	TRANSLATION	protein_coding	-	CCDS15016.1	5	414	34	10.33	10.8	263.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059149	Mfsd4a	ENSMUST00000112365	ENSMUSP00000107984	TRANSLATION	protein_coding	-	-	5	464	0	0	0	49.9	24	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000059149	Mfsd4a	ENSMUST00000161864	ENSMUSP00000124961	TRANSLATION	protein_coding	stop	-	5	425	0	0	2.4	34.1	25	-4,-6	-	-	-1	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000160656	ENSMUSP00000125138	TRANSLATION	protein_coding	start	-	5	406	0	0	0	34.1	21	0,-3	-	-	-1	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000159382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059149	Mfsd4a	ENSMUST00000146267	ENSMUSP00000117864	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	0	0	0	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000144548	ENSMUSP00000116282	TRANSLATION	protein_coding	-	CCDS15280.2	1	512	0	0	1.5	38.5	30	-4,-6	-	-	4.632	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000159038	ENSMUSP00000125558	TRANSLATION	protein_coding	-	CCDS48357.1	5	510	0	0	1.5	40.1	30	-4,-6	-	-	4.824	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000112370	ENSMUSP00000107989	TRANSLATION	protein_coding	-	CCDS15280.2	1	512	0	0	1.5	38.5	30	-4,-6	-	-	4.632	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000126927	ENSMUSP00000116706	TRANSLATION	protein_coding	-	CCDS15280.2	1	512	0	0	1.5	38.5	30	-4,-6	-	-	4.632	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000162628	ENSMUSP00000124786	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000163016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059149	Mfsd4a	ENSMUST00000046658	ENSMUSP00000039635	TRANSLATION	protein_coding	-	-	1	358	0	0	0	0	24	-4,-6	-	-	0	MINOR
ENSMUSG00000059149	Mfsd4a	ENSMUST00000189227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026502	Desi2	ENSMUST00000159284	ENSMUSP00000123860	TRANSLATION	protein_coding	stop	-	5	135	0	1.75	0	135.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026502	Desi2	ENSMUST00000161075	ENSMUSP00000124658	TRANSLATION	protein_coding	-	-	1	178	0	1.75	4.9	135.8	0	-4,-5	-	-	12.84	MINOR
ENSMUSG00000026502	Desi2	ENSMUST00000027783	ENSMUSP00000027783	TRANSLATION	protein_coding	-	CCDS35803.1	1	194	0	1.75	12.1	145.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026502	Desi2	ENSMUST00000069568	ENSMUSP00000063638	TRANSLATION	protein_coding	-	-	-	123	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000135056	ENSMUSP00000114333	TRANSLATION	protein_coding	start/stop	-	5	732	9	3.42	0	384.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000139002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000143350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000076687	ENSMUSP00000075980	TRANSLATION	protein_coding	-	CCDS83650.1	5	1638	30	12.52	6.5	594.2	0	-4,-5	-	-	14.538	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000143161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000145274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000134959	ENSMUSP00000142018	TRANSLATION	nonsense_mediated_decay	-	-	5	93	5	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000097453	ENSMUSP00000095062	TRANSLATION	protein_coding	-	-	5	1691	30	12.37	1.2	694.9	0	-4,-5	-	-	17.793	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000194974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000212756	ENSMUSP00000148469	TRANSLATION	protein_coding	-	-	5	1748	30	12.52	0.5	694.9	0	-4,-5	-	-	18	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000097450	ENSMUSP00000095059	TRANSLATION	protein_coding	-	CCDS83649.1	1	1719	30	12.52	6.5	694.9	0	-4,-5	-	-	20.538	ALTERNATIVE:1
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000133890	ENSMUSP00000116337	TRANSLATION	protein_coding	start	-	5	1048	9	3.42	0	384.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000129754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000152582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000145181	ENSMUSP00000118039	TRANSLATION	protein_coding	start/stop	-	2	185	3	0.15	0	95.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000111117	ENSMUSP00000106746	TRANSLATION	protein_coding	-	CCDS48466.1	1	1732	30	12.52	7.5	694.9	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000143176	ENSMUSP00000115261	TRANSLATION	protein_coding	start	-	5	984	9	3.42	0	384.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026490	Cdc42bpa	ENSMUST00000132894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070695	Cntnap5a	ENSMUST00000043725	ENSMUSP00000035732	TRANSLATION	protein_coding	-	CCDS35689.1	2	1304	0	9.68	1.5	402.4	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000104423	A030005K14Rik	ENSMUST00000193762	ENSMUSP00000152700	TRANSLATION	protein_coding	-	-	-	122	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000118219	Gm29695	ENSMUST00000188175	ENSMUSP00000157559	TRANSLATION	protein_coding	-	-	1	33	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000073494	Sh2d1b2	ENSMUST00000097470	ENSMUSP00000137939	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	1	0	40.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073494	Sh2d1b2	ENSMUST00000162752	ENSMUSP00000125121	TRANSLATION	protein_coding	-	CCDS15469.1	1	132	0	3.25	1.5	57.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004451	Ralb	ENSMUST00000142945	ENSMUSP00000119849	TRANSLATION	protein_coding	start	-	3	149	10	2	0	122.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004451	Ralb	ENSMUST00000156213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004451	Ralb	ENSMUST00000004565	ENSMUSP00000004565	TRANSLATION	protein_coding	-	CCDS15225.1	1	206	20	4.5	19.5	182.4	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000073490	Ifi207	ENSMUST00000042610	ENSMUSP00000048129	TRANSLATION	protein_coding	-	CCDS56659.1	5	978	0	3.33	0.5	277.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000073490	Ifi207	ENSMUST00000127730	ENSMUSP00000119350	TRANSLATION	protein_coding	-	-	2	971	0	3.33	0	277.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031506	Ptpn7	ENSMUST00000188478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031506	Ptpn7	ENSMUST00000049449	ENSMUSP00000045803	TRANSLATION	protein_coding	-	CCDS15315.1	1	359	12	7.5	5.1	264.2	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000031506	Ptpn7	ENSMUST00000167080	ENSMUSP00000129474	TRANSLATION	protein_coding	-	CCDS15315.1	1	359	12	7.5	5.1	264.2	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000031506	Ptpn7	ENSMUST00000187985	ENSMUSP00000141133	TRANSLATION	protein_coding	-	CCDS15315.1	5	359	12	7.5	5.1	264.2	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000060771	Tsga10	ENSMUST00000114902	ENSMUSP00000110552	TRANSLATION	protein_coding	-	CCDS78571.1	1	690	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000060771	Tsga10	ENSMUST00000123082	ENSMUSP00000141261	TRANSLATION	protein_coding	-	-	1	412	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000060771	Tsga10	ENSMUST00000088072	ENSMUSP00000085391	TRANSLATION	protein_coding	-	CCDS69883.1	1	620	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000060771	Tsga10	ENSMUST00000134024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060771	Tsga10	ENSMUST00000151735	ENSMUSP00000120554	TRANSLATION	nonsense_mediated_decay	-	-	1	254	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060771	Tsga10	ENSMUST00000041815	ENSMUSP00000048859	TRANSLATION	protein_coding	-	CCDS14894.1	1	697	0	0	2.9	0	0	-4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000060771	Tsga10	ENSMUST00000193669	ENSMUSP00000142218	TRANSLATION	protein_coding	-	-	1	212	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000060771	Tsga10	ENSMUST00000155852	ENSMUSP00000141630	TRANSLATION	protein_coding	-	-	1	212	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000060771	Tsga10	ENSMUST00000239367	ENSMUSP00000159265	TRANSLATION	protein_coding	-	-	-	781	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000098923	Tmem185b	ENSMUST00000183952	ENSMUSP00000139021	TRANSLATION	protein_coding	-	CCDS69932.1	-	350	0	0	13	203	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000098923	Tmem185b	ENSMUST00000183607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026347	Tmem163	ENSMUST00000160111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026347	Tmem163	ENSMUST00000185560	ENSMUSP00000140828	TRANSLATION	protein_coding	-	CCDS35696.1	1	288	0	0	1.5	0	6	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000026347	Tmem163	ENSMUST00000162406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026347	Tmem163	ENSMUST00000160616	ENSMUSP00000124307	TRANSLATION	protein_coding	-	CCDS35696.1	2	288	0	0	1.5	0	6	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000026347	Tmem163	ENSMUST00000027585	ENSMUSP00000027585	TRANSLATION	nonsense_mediated_decay	-	-	2	288	0	0	1.5	0	6	-4,-2	-	-	-1	MINOR
ENSMUSG00000041889	Shisa4	ENSMUST00000041240	ENSMUSP00000046033	TRANSLATION	protein_coding	-	CCDS15319.1	1	197	0	0	1.5	45.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000041889	Shisa4	ENSMUST00000159918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041889	Shisa4	ENSMUST00000159181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026478	Lamc1	ENSMUST00000160515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026478	Lamc1	ENSMUST00000159251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026478	Lamc1	ENSMUST00000163011	ENSMUSP00000124216	TRANSLATION	nonsense_mediated_decay	start	-	5	125	0	0.56	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026478	Lamc1	ENSMUST00000027752	ENSMUSP00000027752	TRANSLATION	protein_coding	-	CCDS15370.1	1	1607	6	16.675	3.9	744.7	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000026478	Lamc1	ENSMUST00000161744	ENSMUSP00000124662	TRANSLATION	protein_coding	start	-	5	104	0	1.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026018	Ica1l	ENSMUST00000185891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026018	Ica1l	ENSMUST00000187364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026018	Ica1l	ENSMUST00000191251	ENSMUSP00000140520	TRANSLATION	protein_coding	-	CCDS14987.1	1	431	0	0	0.5	445.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026018	Ica1l	ENSMUST00000027172	ENSMUSP00000027172	TRANSLATION	protein_coding	-	CCDS14987.1	1	431	0	0	0.5	445.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026018	Ica1l	ENSMUST00000186970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026018	Ica1l	ENSMUST00000189776	ENSMUSP00000141103	TRANSLATION	protein_coding	-	-	5	439	0	0	1	413.6	0	-4,-5	-	-	4.11	MINOR
ENSMUSG00000091060	Myocos	ENSMUST00000193898	ENSMUSP00000141822	TRANSLATION	protein_coding	-	-	3	62	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000091060	Myocos	ENSMUST00000193257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091060	Myocos	ENSMUST00000169439	ENSMUSP00000127102	TRANSLATION	protein_coding	-	CCDS48418.1	1	143	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000026333	Gin1	ENSMUST00000138142	ENSMUSP00000137741	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026333	Gin1	ENSMUST00000112842	ENSMUSP00000108461	TRANSLATION	protein_coding	-	-	1	118	1	0.42	0	0	0	-4,-6	-	-	2.007	MINOR
ENSMUSG00000026333	Gin1	ENSMUST00000189031	ENSMUSP00000141037	TRANSLATION	nonsense_mediated_decay	start	-	3	61	1	0.42	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026333	Gin1	ENSMUST00000188101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026333	Gin1	ENSMUST00000027571	ENSMUSP00000027571	TRANSLATION	protein_coding	-	CCDS78662.1	1	429	1	1.42	0.5	0	0	-4,-6	-	-	4.407	MINOR
ENSMUSG00000026333	Gin1	ENSMUST00000122925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026333	Gin1	ENSMUST00000112844	ENSMUSP00000108464	TRANSLATION	protein_coding	-	CCDS35679.1	1	518	3	2.5	1.5	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000026380	Tfcp2l1	ENSMUST00000027629	ENSMUSP00000027629	TRANSLATION	protein_coding	-	CCDS35691.1	1	479	0	0	10.4	186.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026380	Tfcp2l1	ENSMUST00000190652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115378	Gm39653	ENSMUST00000226288	ENSMUSP00000154457	TRANSLATION	protein_coding	-	-	-	181	0	0	2.2	0	0	-3,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000026209	Dnpep	ENSMUST00000191254	ENSMUSP00000140997	TRANSLATION	protein_coding	stop	-	5	92	0	2.5	0	41.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000066668	ENSMUSP00000070821	TRANSLATION	protein_coding	-	CCDS15070.1	1	473	6	12.75	7.5	651.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026209	Dnpep	ENSMUST00000113605	ENSMUSP00000109235	TRANSLATION	protein_coding	-	CCDS15070.1	1	473	6	12.75	7.5	651.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026209	Dnpep	ENSMUST00000186278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026209	Dnpep	ENSMUST00000187791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026209	Dnpep	ENSMUST00000189551	ENSMUSP00000140563	TRANSLATION	protein_coding	stop	-	5	210	1	5.46	0	262.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000187075	ENSMUSP00000140877	TRANSLATION	protein_coding	stop	-	3	222	1	6.5	0	282	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000189282	ENSMUSP00000141187	TRANSLATION	protein_coding	stop	-	2	56	0	1.75	0	36.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000187836	ENSMUSP00000139739	TRANSLATION	protein_coding	-	CCDS15070.1	1	473	6	12.75	7.5	651.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026209	Dnpep	ENSMUST00000190005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026209	Dnpep	ENSMUST00000188652	ENSMUSP00000139532	TRANSLATION	protein_coding	stop	-	3	85	0	2.5	0	83.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000185797	ENSMUSP00000140864	TRANSLATION	protein_coding	-	CCDS78623.1	1	475	6	12.75	5.1	651.1	0	-4,-1	-	-	19.893	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000187000	ENSMUSP00000141014	TRANSLATION	protein_coding	stop	-	5	271	2	8	0	353.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026209	Dnpep	ENSMUST00000185419	ENSMUSP00000140035	TRANSLATION	protein_coding	-	-	1	470	6	12.25	0	644	0	-4,-1	-	-	16.572	MINOR
ENSMUSG00000015355	Cd48	ENSMUST00000015499	ENSMUSP00000015499	TRANSLATION	protein_coding	-	-	1	151	0	1	0	38.6	0	3,-2	-	-	7.542	MINOR
ENSMUSG00000015355	Cd48	ENSMUST00000068584	ENSMUSP00000064241	TRANSLATION	protein_coding	-	CCDS15501.1	1	240	0	1.42	1.5	69.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026285	Pdcd1	ENSMUST00000027507	ENSMUSP00000027507	TRANSLATION	protein_coding	-	CCDS15200.1	1	288	0	2.35	1.5	62.5	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000008475	Arpc5	ENSMUST00000143008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008475	Arpc5	ENSMUST00000077755	ENSMUSP00000076933	TRANSLATION	protein_coding	-	CCDS35739.1	1	151	0	3.5	17.5	207.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000008475	Arpc5	ENSMUST00000097536	ENSMUSP00000095143	TRANSLATION	protein_coding	-	-	1	92	0	2.5	0	66	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000058715	Fcer1g	ENSMUST00000150997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058715	Fcer1g	ENSMUST00000079957	ENSMUSP00000078875	TRANSLATION	protein_coding	-	CCDS15483.1	1	86	0	1	1.5	81	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058715	Fcer1g	ENSMUST00000193973	ENSMUSP00000141240	TRANSLATION	protein_coding	-	-	3	92	0	1	0	58	1	3,-2	-	-	10.296	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000027036	ENSMUSP00000027036	TRANSLATION	protein_coding	-	CCDS14806.1	1	230	7	6.41	20.3	298.7	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025903	Lypla1	ENSMUST00000115529	ENSMUSP00000111191	TRANSLATION	protein_coding	-	-	2	196	6	5.41	4.9	233.9	0	-4,-7	-	-	12.064	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000119612	ENSMUSP00000137647	TRANSLATION	protein_coding	-	-	3	92	2	2.83	0	113.6	0	-4,-7	-	-	1.716	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000134384	ENSMUSP00000137104	TRANSLATION	nonsense_mediated_decay	-	-	1	224	7	6.174	0	281.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000131119	ENSMUSP00000118453	TRANSLATION	protein_coding	stop	-	3	142	4	3.75	0	183.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000141278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025903	Lypla1	ENSMUST00000137887	ENSMUSP00000119456	TRANSLATION	protein_coding	stop	-	5	142	5	4.08	0	166	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025903	Lypla1	ENSMUST00000150971	ENSMUSP00000137248	TRANSLATION	protein_coding	-	-	1	221	7	6.108	0	279.9	0	-4,-7	-	-	16.266	MINOR
ENSMUSG00000038079	Tmem237	ENSMUST00000186794	ENSMUSP00000139823	TRANSLATION	protein_coding	-	-	1	427	0	0	0	335.9	3	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038079	Tmem237	ENSMUST00000087475	ENSMUSP00000084745	TRANSLATION	protein_coding	-	CCDS14984.1	1	403	0	0	1.5	335.9	3	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000038079	Tmem237	ENSMUST00000094917	ENSMUSP00000092522	TRANSLATION	protein_coding	-	CCDS14983.1	1	413	0	0	1.5	335.9	3	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000038079	Tmem237	ENSMUST00000190014	ENSMUSP00000140134	TRANSLATION	protein_coding	stop	-	5	230	0	0	0	107	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038079	Tmem237	ENSMUST00000186820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038079	Tmem237	ENSMUST00000186395	ENSMUSP00000140461	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038079	Tmem237	ENSMUST00000185951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026692	Fmo4	ENSMUST00000140274	ENSMUSP00000118476	TRANSLATION	protein_coding	stop	-	3	99	16	1.492	0	186.7	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000026692	Fmo4	ENSMUST00000193508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026692	Fmo4	ENSMUST00000140031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026692	Fmo4	ENSMUST00000028014	ENSMUSP00000028014	TRANSLATION	protein_coding	-	CCDS15423.1	1	560	45	3.702	1.5	894.1	1	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000026692	Fmo4	ENSMUST00000111525	ENSMUSP00000107150	TRANSLATION	protein_coding	-	CCDS15423.1	5	560	45	3.702	1.5	894.1	1	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000026692	Fmo4	ENSMUST00000144916	ENSMUSP00000119389	TRANSLATION	protein_coding	stop	-	3	113	10	1.37	0	205.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026097	Ormdl1	ENSMUST00000135746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026097	Ormdl1	ENSMUST00000027266	ENSMUSP00000027266	TRANSLATION	protein_coding	-	CCDS14952.1	1	153	0	0	19.5	179.7	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000026005	Rpe	ENSMUST00000142920	ENSMUSP00000137941	TRANSLATION	nonsense_mediated_decay	-	-	3	71	5	1.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026005	Rpe	ENSMUST00000151016	ENSMUSP00000137860	TRANSLATION	nonsense_mediated_decay	-	-	3	41	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026005	Rpe	ENSMUST00000027157	ENSMUSP00000027157	TRANSLATION	protein_coding	-	CCDS15022.1	1	228	18	6.16	19.5	0	0	-4,-5	-	-	15.88	PRINCIPAL:1
ENSMUSG00000026005	Rpe	ENSMUST00000113995	ENSMUSP00000109628	TRANSLATION	protein_coding	-	CCDS78602.1	3	235	17	6.2194	1.7	0	0	-4,-5	-	-	11.486	MINOR
ENSMUSG00000026005	Rpe	ENSMUST00000190404	ENSMUSP00000140257	TRANSLATION	nonsense_mediated_decay	-	-	5	50	4	1.0594	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049608	Gpr55	ENSMUST00000086975	ENSMUSP00000084196	TRANSLATION	protein_coding	-	CCDS15115.1	1	327	0	0.42	0.5	95.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026173	Plcd4	ENSMUST00000152707	ENSMUSP00000121732	TRANSLATION	nonsense_mediated_decay	-	-	5	574	7	6.76	0.5	374.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026173	Plcd4	ENSMUST00000067916	ENSMUSP00000064413	TRANSLATION	protein_coding	-	-	5	775	13	12.12	1.5	583.1	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000026173	Plcd4	ENSMUST00000141412	ENSMUSP00000115322	TRANSLATION	nonsense_mediated_decay	-	-	1	574	7	6.76	0.5	374.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026173	Plcd4	ENSMUST00000113747	ENSMUSP00000109376	TRANSLATION	protein_coding	-	CCDS35617.1	1	775	13	12.12	1.5	583.1	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000026173	Plcd4	ENSMUST00000113745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026173	Plcd4	ENSMUST00000185411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026173	Plcd4	ENSMUST00000113750	ENSMUSP00000109379	TRANSLATION	protein_coding	-	-	1	798	13	11.61	0	582.6	0	-4,-5	-	-	16.548	MINOR
ENSMUSG00000026173	Plcd4	ENSMUST00000027362	ENSMUSP00000027362	TRANSLATION	protein_coding	-	CCDS35616.1	1	807	13	12.32	1.5	583.1	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000026173	Plcd4	ENSMUST00000189956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026173	Plcd4	ENSMUST00000113749	ENSMUSP00000109378	TRANSLATION	protein_coding	-	-	5	807	13	12.32	1.5	583.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026173	Plcd4	ENSMUST00000135111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000128578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000027637	ENSMUSP00000027637	TRANSLATION	protein_coding	-	CCDS48342.1	1	121	0	0	0.5	72.1	0	-4,-6	-	-	2.052	MINOR
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000153037	ENSMUSP00000115887	TRANSLATION	protein_coding	start	-	3	138	0	0	0	40.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000112644	ENSMUSP00000108263	TRANSLATION	protein_coding	-	CCDS15232.1	1	126	0	0	12.8	137.9	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000187809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026388	3110009E18Rik	ENSMUST00000056038	ENSMUSP00000053335	TRANSLATION	protein_coding	-	CCDS48342.1	5	121	0	0	0.5	72.1	0	-4,-6	-	-	2.052	MINOR
ENSMUSG00000115958	Gm28040	ENSMUST00000193888	ENSMUSP00000142234	TRANSLATION	protein_coding,RT	-	CCDS48362.1	2	126	0	0	1.5	114.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000115958	Gm28040	ENSMUST00000195286	ENSMUSP00000142264	TRANSLATION	protein_coding	-	CCDS48362.1	1	126	0	0	1.5	114.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000115958	Gm28040	ENSMUST00000194044	ENSMUSP00000141501	TRANSLATION	protein_coding,RT	-	CCDS48362.1	2	126	0	0	1.5	114.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000098509	Rgs21	ENSMUST00000184008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098509	Rgs21	ENSMUST00000184189	ENSMUSP00000139265	TRANSLATION	protein_coding	-	CCDS69952.1	5	152	0	2.6	8.4	137.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044055	Otos	ENSMUST00000159803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044055	Otos	ENSMUST00000053144	ENSMUSP00000061683	TRANSLATION	protein_coding	-	CCDS35668.1	1	89	0	0	5.2	128.2	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000026558	Uck2	ENSMUST00000192269	ENSMUSP00000142172	TRANSLATION	protein_coding	start/stop	-	2	187	26	4.23	0	150.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026558	Uck2	ENSMUST00000193579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026558	Uck2	ENSMUST00000195443	ENSMUSP00000141986	TRANSLATION	protein_coding	start	-	3	194	11	4.58	0	131.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026558	Uck2	ENSMUST00000027839	ENSMUSP00000027839	TRANSLATION	protein_coding	start	-	3	250	21	5.58	0	163.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026558	Uck2	ENSMUST00000191745	ENSMUSP00000141787	TRANSLATION	nonsense_mediated_decay	-	-	3	74	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026558	Uck2	ENSMUST00000053686	ENSMUSP00000060202	TRANSLATION	protein_coding	-	CCDS15455.1	1	261	27	6.58	12.8	182.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026558	Uck2	ENSMUST00000192702	ENSMUSP00000141216	TRANSLATION	nonsense_mediated_decay	-	-	5	130	21	3.132	0	73.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073530	Pappa2	ENSMUST00000159861	ENSMUSP00000124022	TRANSLATION	protein_coding	-	CCDS48409.1	5	1789	4	2.42	1.5	192.2	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000073530	Pappa2	ENSMUST00000159860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073530	Pappa2	ENSMUST00000161589	ENSMUSP00000124316	TRANSLATION	protein_coding	start/stop	-	5	246	0	1.12	0	42.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000073530	Pappa2	ENSMUST00000177789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073530	Pappa2	ENSMUST00000160206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073530	Pappa2	ENSMUST00000159892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079465	Col4a3	ENSMUST00000141994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079465	Col4a3	ENSMUST00000113457	ENSMUSP00000109084	TRANSLATION	protein_coding	-	CCDS35631.1	1	1669	1	20.745	1.7	772.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079465	Col4a3	ENSMUST00000125563	ENSMUSP00000137944	TRANSLATION	nonsense_mediated_decay	start	-	5	61	0	1	0	50.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000079465	Col4a3	ENSMUST00000152664	ENSMUSP00000119094	TRANSLATION	protein_coding	start	-	5	197	0	3.08	0	169.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026415	Fcamr	ENSMUST00000112477	ENSMUSP00000108096	TRANSLATION	protein_coding	-	CCDS48353.1	1	591	0	1	0.5	47.6	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026415	Fcamr	ENSMUST00000027670	ENSMUSP00000027670	TRANSLATION	protein_coding	-	CCDS15259.1	1	535	0	1	1.5	47.6	1	-2,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000026270	Capn10	ENSMUST00000117814	ENSMUSP00000112831	TRANSLATION	protein_coding	-	-	1	264	0	3.5	0	198.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000026270	Capn10	ENSMUST00000027488	ENSMUSP00000027488	TRANSLATION	protein_coding	-	CCDS15181.1	1	666	0	7.23	1.5	395.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026270	Capn10	ENSMUST00000187342	ENSMUSP00000141110	TRANSLATION	nonsense_mediated_decay	start	-	5	179	0	2.1	0	66.1	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000026270	Capn10	ENSMUST00000128429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026270	Capn10	ENSMUST00000153828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026270	Capn10	ENSMUST00000136598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026270	Capn10	ENSMUST00000152983	ENSMUSP00000122158	TRANSLATION	nonsense_mediated_decay	-	-	5	507	0	7.23	0	342.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000104217	Gm37988	ENSMUST00000155020	ENSMUSP00000136108	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	62	0	1.15	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000016493	Cd46	ENSMUST00000162650	ENSMUSP00000123931	TRANSLATION	protein_coding	-	CCDS35828.1	1	365	0	5.1	0.5	156.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000016493	Cd46	ENSMUST00000161772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016493	Cd46	ENSMUST00000159563	ENSMUSP00000123901	TRANSLATION	nonsense_mediated_decay	-	-	1	300	0	5	0	156.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000016493	Cd46	ENSMUST00000162951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026683	Nuf2	ENSMUST00000194831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026683	Nuf2	ENSMUST00000192248	ENSMUSP00000141427	TRANSLATION	protein_coding	-	-	1	296	0	4.75	0	119	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000026683	Nuf2	ENSMUST00000111368	ENSMUSP00000106999	TRANSLATION	protein_coding	-	CCDS15463.1	1	463	0	4.75	0.5	119	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000026683	Nuf2	ENSMUST00000028000	ENSMUSP00000028000	TRANSLATION	protein_coding	-	CCDS15463.1	1	463	0	4.75	0.5	119	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000026683	Nuf2	ENSMUST00000195342	ENSMUSP00000141319	TRANSLATION	protein_coding	start/stop	-	5	171	0	1	0	36.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026357	Rgs18	ENSMUST00000027603	ENSMUSP00000027603	TRANSLATION	protein_coding	-	CCDS15350.1	1	235	0	3.17	7.5	125.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026509	Capn2	ENSMUST00000068505	ENSMUSP00000068895	TRANSLATION	protein_coding	-	CCDS35813.1	1	700	30	16.08	9.6	645.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026509	Capn2	ENSMUST00000192483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026509	Capn2	ENSMUST00000194961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026509	Capn2	ENSMUST00000194940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026509	Capn2	ENSMUST00000192230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026542	Apcs	ENSMUST00000027824	ENSMUSP00000027824	TRANSLATION	protein_coding	-	CCDS15520.1	1	224	9	1.15	5.1	321.4	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000042849	Olfr1414	ENSMUST00000189174	ENSMUSP00000140956	TRANSLATION	protein_coding	-	CCDS15170.1	3	312	0	0.16	6.3	175.6	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042849	Olfr1414	ENSMUST00000062353	ENSMUSP00000054752	TRANSLATION	protein_coding	-	CCDS15170.1	2	312	0	0.16	6.3	175.6	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026313	Hdac4	ENSMUST00000008995	ENSMUSP00000008995	TRANSLATION	protein_coding	-	CCDS48324.1	1	1076	7	12.55	0.5	395.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026313	Hdac4	ENSMUST00000189730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026313	Hdac4	ENSMUST00000187308	ENSMUSP00000140092	TRANSLATION	protein_coding	start/stop	-	5	312	6	6.05	0	192.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026313	Hdac4	ENSMUST00000189303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026313	Hdac4	ENSMUST00000185341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026313	Hdac4	ENSMUST00000186002	ENSMUSP00000141018	TRANSLATION	protein_coding	stop	-	3	112	0	1	0	84.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026313	Hdac4	ENSMUST00000185267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026313	Hdac4	ENSMUST00000212408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026313	Hdac4	ENSMUST00000097644	ENSMUSP00000095249	TRANSLATION	protein_coding	-	CCDS48324.1	1	1076	7	12.55	0.5	395.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026313	Hdac4	ENSMUST00000212867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026313	Hdac4	ENSMUST00000187622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026313	Hdac4	ENSMUST00000191327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042207	Kdm5b	ENSMUST00000112197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042207	Kdm5b	ENSMUST00000191572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042207	Kdm5b	ENSMUST00000186128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042207	Kdm5b	ENSMUST00000133725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042207	Kdm5b	ENSMUST00000047714	ENSMUSP00000038138	TRANSLATION	protein_coding	-	CCDS35716.1	1	1544	14	14.89	3.9	724.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000042207	Kdm5b	ENSMUST00000112198	ENSMUSP00000107817	TRANSLATION	protein_coding	-	-	1	1517	14	14.89	0	693.7	0	-4,-5	-	-	16.176	MINOR
ENSMUSG00000048411	Gm597	ENSMUST00000059937	ENSMUSP00000058140	TRANSLATION	protein_coding	-	CCDS48232.1	1	896	0	0	0.5	43.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038323	1700066M21Rik	ENSMUST00000042734	ENSMUSP00000040240	TRANSLATION	protein_coding	-	CCDS48264.1	1	365	0	0	1.5	373.5	0	2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038323	1700066M21Rik	ENSMUST00000187255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038323	1700066M21Rik	ENSMUST00000185952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091017	Fam71a	ENSMUST00000171798	ENSMUSP00000127945	TRANSLATION	protein_coding	-	CCDS48487.1	-	585	0	0	0.5	94.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038174	Fam126b	ENSMUST00000187717	ENSMUSP00000141058	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038174	Fam126b	ENSMUST00000097724	ENSMUSP00000095331	TRANSLATION	protein_coding	-	CCDS78588.1	1	586	0	8.6	11.6	396.5	0	-4,-5	-	-	15.364	ALTERNATIVE:1
ENSMUSG00000038174	Fam126b	ENSMUST00000159185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038174	Fam126b	ENSMUST00000160546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038174	Fam126b	ENSMUST00000161000	ENSMUSP00000125653	TRANSLATION	protein_coding	stop	-	3	98	0	3	0	95.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038174	Fam126b	ENSMUST00000038372	ENSMUSP00000038718	TRANSLATION	protein_coding	-	CCDS14976.1	1	530	0	8.6	13.6	396.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000038174	Fam126b	ENSMUST00000161600	ENSMUSP00000123728	TRANSLATION	protein_coding	-	CCDS14976.1	1	530	0	8.6	13.6	396.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000038174	Fam126b	ENSMUST00000159980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038174	Fam126b	ENSMUST00000191472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026361	Cdc73	ENSMUST00000162638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026361	Cdc73	ENSMUST00000188838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026361	Cdc73	ENSMUST00000018337	ENSMUSP00000018337	TRANSLATION	protein_coding	-	CCDS15341.1	1	531	0	2.05	17.5	611	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026361	Cdc73	ENSMUST00000189597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026361	Cdc73	ENSMUST00000212510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026361	Cdc73	ENSMUST00000159794	ENSMUSP00000139872	TRANSLATION	nonsense_mediated_decay	start	-	3	73	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000033898	Cfhr2	ENSMUST00000094489	ENSMUSP00000092065	TRANSLATION	protein_coding	-	CCDS15339.1	1	332	0	5.15	1.5	107.9	0	3,-2	-	-	10.914	PRINCIPAL:2
ENSMUSG00000033898	Cfhr2	ENSMUST00000239380	ENSMUSP00000159242	TRANSLATION	protein_coding	-	-	-	332	0	5.15	0.5	126	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000033898	Cfhr2	ENSMUST00000194186	ENSMUSP00000142033	TRANSLATION	protein_coding	-	-	1	303	0	4.75	0	90.8	0	3,-2	-	-	9.09	MINOR
ENSMUSG00000026492	Tfb2m	ENSMUST00000139993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026492	Tfb2m	ENSMUST00000129982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026492	Tfb2m	ENSMUST00000150778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026492	Tfb2m	ENSMUST00000129009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026492	Tfb2m	ENSMUST00000027769	ENSMUSP00000027769	TRANSLATION	protein_coding	-	CCDS15561.1	1	396	0	1.4	1.5	0	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000079283	2310009B15Rik	ENSMUST00000195075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079283	2310009B15Rik	ENSMUST00000112025	ENSMUSP00000107656	TRANSLATION	protein_coding	-	CCDS35727.1	2	136	0	0	1.5	0	0	-3,1	-	-	0	PRINCIPAL:1
ENSMUSG00000079283	2310009B15Rik	ENSMUST00000193374	ENSMUSP00000141565	TRANSLATION	nonsense_mediated_decay	-	-	1	143	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000025777	Gdap1	ENSMUST00000189465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025777	Gdap1	ENSMUST00000189736	ENSMUSP00000140406	TRANSLATION	nonsense_mediated_decay	-	-	5	60	3	0.82	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025777	Gdap1	ENSMUST00000150457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025777	Gdap1	ENSMUST00000026879	ENSMUSP00000026879	TRANSLATION	protein_coding	-	CCDS14834.1	1	358	11	3	8.8	98.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000109809	Gm34066	ENSMUST00000210156	ENSMUSP00000158889	TRANSLATION	protein_coding	-	-	5	100	0	0	1	144.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000018196	Glrx2	ENSMUST00000111957	ENSMUSP00000107588	TRANSLATION	protein_coding	-	CCDS15344.1	1	123	14	2.75	2.7	69.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000018196	Glrx2	ENSMUST00000185367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018196	Glrx2	ENSMUST00000145969	ENSMUSP00000121665	TRANSLATION	protein_coding	-	CCDS15344.1	1	123	14	2.75	2.7	69.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000018196	Glrx2	ENSMUST00000152435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018196	Glrx2	ENSMUST00000050491	ENSMUSP00000053443	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	0.75	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000018196	Glrx2	ENSMUST00000185362	ENSMUSP00000141022	TRANSLATION	protein_coding	-	CCDS15343.1	1	156	14	2.75	1.5	69.3	0	-3,1	-	-	18	PRINCIPAL:4
ENSMUSG00000018196	Glrx2	ENSMUST00000149103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018196	Glrx2	ENSMUST00000188783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018196	Glrx2	ENSMUST00000129653	ENSMUSP00000121010	TRANSLATION	protein_coding	-	CCDS15344.1	1	123	14	2.75	2.7	69.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000018196	Glrx2	ENSMUST00000145571	ENSMUSP00000115893	TRANSLATION	protein_coding	-	-	2	170	14	1.75	0	46.1	0	-3,1	-	-	13.806	MINOR
ENSMUSG00000018196	Glrx2	ENSMUST00000148600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018196	Glrx2	ENSMUST00000190211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018196	Glrx2	ENSMUST00000126514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026039	Sgo2a	ENSMUST00000190746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026039	Sgo2a	ENSMUST00000027202	ENSMUSP00000027202	TRANSLATION	protein_coding	-	CCDS35574.1	1	1164	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000070031	Sp140	ENSMUST00000161497	ENSMUSP00000125026	TRANSLATION	protein_coding	start	-	5	184	9	4.1	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070031	Sp140	ENSMUST00000113385	ENSMUSP00000109012	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070031	Sp140	ENSMUST00000159234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070031	Sp140	ENSMUST00000080204	ENSMUSP00000079095	TRANSLATION	protein_coding	-	CCDS35638.1	1	534	9	6.7	0.5	259.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070031	Sp140	ENSMUST00000160119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070031	Sp140	ENSMUST00000162925	ENSMUSP00000123756	TRANSLATION	protein_coding	start	-	5	159	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042066	Tmcc2	ENSMUST00000125439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042066	Tmcc2	ENSMUST00000136828	ENSMUSP00000159152	TRANSLATION	protein_coding	-	-	3	524	0	0	4.6	583.2	2	-4,-2	-	-	7.756	ALTERNATIVE:1
ENSMUSG00000042066	Tmcc2	ENSMUST00000138717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042066	Tmcc2	ENSMUST00000132435	ENSMUSP00000118844	TRANSLATION	protein_coding	-	CCDS78682.1	1	628	0	0	1.5	583.2	2	-4,-1	-	-	6.244	MINOR
ENSMUSG00000042066	Tmcc2	ENSMUST00000045473	ENSMUSP00000038369	TRANSLATION	protein_coding	-	CCDS15284.1	1	706	0	0	1.5	583.2	2	-4,-5	-	-	6.244	MINOR
ENSMUSG00000042066	Tmcc2	ENSMUST00000142609	ENSMUSP00000115721	TRANSLATION	protein_coding	-	CCDS78681.1	1	471	0	0	5.1	583.2	2	-4,-5	-	-	8	PRINCIPAL:2
ENSMUSG00000053286	Trmt1l	ENSMUST00000188843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053286	Trmt1l	ENSMUST00000188679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053286	Trmt1l	ENSMUST00000188179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053286	Trmt1l	ENSMUST00000065625	ENSMUSP00000068309	TRANSLATION	protein_coding	-	CCDS15361.1	1	728	21	2.74	1.5	223.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053286	Trmt1l	ENSMUST00000185230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053286	Trmt1l	ENSMUST00000189655	ENSMUSP00000140009	TRANSLATION	nonsense_mediated_decay	-	-	1	158	6	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053286	Trmt1l	ENSMUST00000186244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034486	Gbx2	ENSMUST00000036954	ENSMUSP00000048508	TRANSLATION	protein_coding	-	CCDS15150.1	1	348	0	0.8	7.5	82.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000034486	Gbx2	ENSMUST00000187633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026014	Raph1	ENSMUST00000142258	ENSMUSP00000120638	TRANSLATION	protein_coding	stop	-	3	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026014	Raph1	ENSMUST00000182085	ENSMUSP00000138682	TRANSLATION	protein_coding	start	-	3	216	0	3.55	0	34.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026014	Raph1	ENSMUST00000140485	ENSMUSP00000121023	TRANSLATION	protein_coding	-	CCDS48275.2	5	1266	0	8.2	1.5	93.3	0	-4,-5	-	-	11.892	MINOR
ENSMUSG00000026014	Raph1	ENSMUST00000090293	ENSMUSP00000087763	TRANSLATION	protein_coding	-	-	5	645	0	8.35	3.6	93.3	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000026014	Raph1	ENSMUST00000027168	ENSMUSP00000027168	TRANSLATION	protein_coding	-	-	5	679	0	8.35	0.5	93.3	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000026014	Raph1	ENSMUST00000188511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026014	Raph1	ENSMUST00000127573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026014	Raph1	ENSMUST00000189383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000204325	ENSMUSP00000144798	TRANSLATION	nonsense_mediated_decay	start	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000049404	ENSMUSP00000042266	TRANSLATION	protein_coding	-	-	5	1536	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000190135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000186349	ENSMUSP00000141105	TRANSLATION	protein_coding	-	-	5	1536	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000189570	ENSMUSP00000140167	TRANSLATION	protein_coding	-	-	5	1468	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000165223	ENSMUSP00000128089	TRANSLATION	protein_coding	-	-	5	1452	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000178710	ENSMUSP00000137137	TRANSLATION	protein_coding	-	-	5	1459	0	18.734	0	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000189216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000191445	ENSMUSP00000140095	TRANSLATION	protein_coding	-	-	5	1469	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000203870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000204886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064302	Clasp1	ENSMUST00000205176	ENSMUSP00000144818	TRANSLATION	protein_coding	start/stop	-	5	285	0	2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000189262	ENSMUSP00000140860	TRANSLATION	protein_coding	-	-	5	1460	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000189738	ENSMUSP00000140665	TRANSLATION	protein_coding	-	-	5	1477	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000204552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064302	Clasp1	ENSMUST00000190733	ENSMUSP00000140778	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000192387	ENSMUSP00000141582	TRANSLATION	protein_coding	start/stop	-	5	345	0	2.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000070989	ENSMUSP00000067858	TRANSLATION	protein_coding	-	-	5	1526	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000191823	ENSMUSP00000142203	TRANSLATION	protein_coding	-	-	5	1244	0	13.86	0	135.1	0	-4,-5	-	-	3.186	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000189676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000185405	ENSMUSP00000139619	TRANSLATION	protein_coding	-	-	5	1492	0	18.359	0	182	0	-4,-5	-	-	11.25	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000203646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064302	Clasp1	ENSMUST00000189384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000190571	ENSMUSP00000140019	TRANSLATION	protein_coding	-	-	5	1552	0	18.734	0.5	182	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000064302	Clasp1	ENSMUST00000188710	ENSMUSP00000140593	TRANSLATION	protein_coding	-	-	5	1526	0	18.734	0.5	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064302	Clasp1	ENSMUST00000203009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000204904	ENSMUSP00000145100	TRANSLATION	nonsense_mediated_decay	start	-	5	177	0	3.454	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064302	Clasp1	ENSMUST00000187575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000188441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064302	Clasp1	ENSMUST00000187713	ENSMUSP00000139526	TRANSLATION	protein_coding	-	-	5	1475	0	18.734	0	182	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000067001	Serpinb7	ENSMUST00000086690	ENSMUSP00000083896	TRANSLATION	protein_coding	-	CCDS35686.1	1	380	0	5.98	3.9	395.3	2	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000067001	Serpinb7	ENSMUST00000154538	ENSMUSP00000119217	TRANSLATION	protein_coding	stop	-	2	97	0	1.88	0	64.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000127775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000135245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000187892	ENSMUSP00000139433	TRANSLATION	protein_coding	-	-	3	241	0	0.8	0	72.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000188605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000233331	ENSMUSP00000156897	TRANSLATION	protein_coding	-	-	-	241	0	0.8	0	72.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000187659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086727	4931428L18Rik	ENSMUST00000152491	ENSMUSP00000156852	TRANSLATION	protein_coding	-	-	-	241	0	0.8	0	72.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000118401	Gpr52	ENSMUST00000238289	ENSMUSP00000158769	TRANSLATION	protein_coding	-	-	-	361	0	0.42	17	134.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000060743	H3f3a	ENSMUST00000081026	ENSMUSP00000079816	TRANSLATION	protein_coding	-	-	5	135	0	3.43	21.5	170.8	0	-4,-7	-	-	15.064	ALTERNATIVE:1
ENSMUSG00000060743	H3f3a	ENSMUST00000159789	ENSMUSP00000125754	TRANSLATION	protein_coding	stop	-	3	119	0	3.08	0	151.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060743	H3f3a	ENSMUST00000159441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060743	H3f3a	ENSMUST00000159685	ENSMUSP00000124040	TRANSLATION	protein_coding	stop	-	2	52	0	1.33	0	33.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060743	H3f3a	ENSMUST00000162118	ENSMUSP00000123946	TRANSLATION	protein_coding	stop	-	3	55	0	1.33	0	38.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060743	H3f3a	ENSMUST00000161308	ENSMUSP00000124509	TRANSLATION	protein_coding	-	CCDS15573.1	1	136	0	3.58	21.5	181.4	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000060743	H3f3a	ENSMUST00000162814	ENSMUSP00000125104	TRANSLATION	protein_coding	-	CCDS15573.1	3	136	0	3.58	21.5	181.4	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000067336	Bmpr2	ENSMUST00000087435	ENSMUSP00000084701	TRANSLATION	protein_coding	-	CCDS35588.1	1	1038	21	9	7.5	171.9	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000067336	Bmpr2	ENSMUST00000186246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067336	Bmpr2	ENSMUST00000190659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000100846	Gm28845	ENSMUST00000144760	ENSMUSP00000140504	TRANSLATION	protein_coding,RT	start	-	5	214	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000026155	Smap1	ENSMUST00000141330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026155	Smap1	ENSMUST00000027339	ENSMUSP00000027339	TRANSLATION	protein_coding	-	CCDS14851.1	1	440	4	3.65	3.9	142.2	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000026155	Smap1	ENSMUST00000133398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026155	Smap1	ENSMUST00000136506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026155	Smap1	ENSMUST00000129254	ENSMUSP00000117875	TRANSLATION	protein_coding	-	CCDS69870.1	1	355	0	1.65	1.5	0	0	-4,-5	-	-	2.17	MINOR
ENSMUSG00000026155	Smap1	ENSMUST00000148710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026155	Smap1	ENSMUST00000149737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047048	Olfr432	ENSMUST00000213381	ENSMUSP00000150596	TRANSLATION	protein_coding	-	CCDS15536.1	5	312	0	0.36	5.1	157.6	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000047048	Olfr432	ENSMUST00000213211	ENSMUSP00000150301	TRANSLATION	protein_coding	-	CCDS15536.1	5	312	0	0.36	5.1	157.6	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000047048	Olfr432	ENSMUST00000062665	ENSMUSP00000060341	TRANSLATION	protein_coding	-	CCDS15536.1	-	312	0	0.36	5.1	157.6	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049598	Vsig8	ENSMUST00000177086	ENSMUSP00000134997	TRANSLATION	protein_coding	-	-	1	305	0	1.76	0	35.4	1	-4,-6	-	-	5.874	MINOR
ENSMUSG00000049598	Vsig8	ENSMUST00000061835	ENSMUSP00000058008	TRANSLATION	protein_coding	-	CCDS15516.1	1	417	0	3.04	1.5	87.1	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026321	Tnfrsf11a	ENSMUST00000027559	ENSMUSP00000027559	TRANSLATION	protein_coding	-	CCDS15207.1	1	625	0	4.75	0.5	22.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026321	Tnfrsf11a	ENSMUST00000187812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026321	Tnfrsf11a	ENSMUST00000187658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026065	Slc9a4	ENSMUST00000192849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026065	Slc9a4	ENSMUST00000192454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026065	Slc9a4	ENSMUST00000193371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026065	Slc9a4	ENSMUST00000027233	ENSMUSP00000027233	TRANSLATION	protein_coding	-	CCDS14913.1	1	797	0	2.34	1.5	428.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000066842	Hmcn1	ENSMUST00000155715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066842	Hmcn1	ENSMUST00000137909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066842	Hmcn1	ENSMUST00000177036	ENSMUSP00000134985	TRANSLATION	protein_coding	start	-	5	155	22	2.98	0	126.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066842	Hmcn1	ENSMUST00000137197	ENSMUSP00000121500	TRANSLATION	protein_coding	-	-	5	5517	27	58.5	3.6	2986.8	0	1,-3	-	-	16.942	MINOR
ENSMUSG00000066842	Hmcn1	ENSMUST00000151899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066842	Hmcn1	ENSMUST00000074783	ENSMUSP00000074340	TRANSLATION	protein_coding	-	CCDS15357.2	5	5634	27	58.7	6.3	3014.1	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000026587	Astn1	ENSMUST00000170718	ENSMUSP00000127428	TRANSLATION	protein_coding	-	-	1	840	0	2.4	0	34.7	1	2,-2	-	-	6	MINOR
ENSMUSG00000026587	Astn1	ENSMUST00000194041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026587	Astn1	ENSMUST00000192821	ENSMUSP00000141260	TRANSLATION	protein_coding	start	-	5	236	0	3.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026587	Astn1	ENSMUST00000046110	ENSMUSP00000039711	TRANSLATION	protein_coding	-	CCDS78721.1	1	1294	0	10.47	5.1	34.7	1	2,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000026587	Astn1	ENSMUST00000193042	ENSMUSP00000142322	TRANSLATION	protein_coding	-	CCDS56648.1	1	1302	0	10.47	2.9	34.7	1	2,-2	-	-	12.926	PRINCIPAL:3
ENSMUSG00000026587	Astn1	ENSMUST00000192619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026587	Astn1	ENSMUST00000194217	ENSMUSP00000141580	TRANSLATION	nonsense_mediated_decay	start	-	3	76	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026587	Astn1	ENSMUST00000194369	ENSMUSP00000142017	TRANSLATION	protein_coding	-	-	1	893	0	2.4	0	34.7	1	2,-2	-	-	6	MINOR
ENSMUSG00000026587	Astn1	ENSMUST00000195311	ENSMUSP00000141518	TRANSLATION	protein_coding	-	-	1	1172	0	7.72	0	34.7	1	2,-2	-	-	6.498	MINOR
ENSMUSG00000026587	Astn1	ENSMUST00000194658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026587	Astn1	ENSMUST00000193599	ENSMUSP00000141498	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026500	Cox20	ENSMUST00000154437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026500	Cox20	ENSMUST00000027781	ENSMUSP00000027781	TRANSLATION	protein_coding	-	CCDS15556.1	1	117	0	0	1.5	43.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000059498	Fcgr3	ENSMUST00000168817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059498	Fcgr3	ENSMUST00000164179	ENSMUSP00000133039	TRANSLATION	protein_coding	stop	-	3	74	0	1.198	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000059498	Fcgr3	ENSMUST00000169017	ENSMUSP00000131836	TRANSLATION	protein_coding	-	-	1	266	0	3.198	1.5	80.1	1	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000059498	Fcgr3	ENSMUST00000164044	ENSMUSP00000131938	TRANSLATION	protein_coding	-	CCDS15477.2	1	267	0	3.198	1.5	80.1	1	-1,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000038209	Itln1	ENSMUST00000043094	ENSMUSP00000043837	TRANSLATION	protein_coding	-	CCDS35777.1	1	313	0	6.41	1.5	23.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038209	Itln1	ENSMUST00000168184	ENSMUSP00000126385	TRANSLATION	protein_coding	start/stop	-	5	140	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026491	Ahctf1	ENSMUST00000027768	ENSMUSP00000027768	TRANSLATION	protein_coding	-	CCDS15564.1	1	2243	0	9.5	0.5	1189.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026491	Ahctf1	ENSMUST00000125816	ENSMUSP00000119738	TRANSLATION	nonsense_mediated_decay	start	-	3	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026491	Ahctf1	ENSMUST00000147137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026491	Ahctf1	ENSMUST00000151734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026491	Ahctf1	ENSMUST00000127250	ENSMUSP00000120551	TRANSLATION	nonsense_mediated_decay	start	-	2	35	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026491	Ahctf1	ENSMUST00000194536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026491	Ahctf1	ENSMUST00000140489	ENSMUSP00000115253	TRANSLATION	protein_coding	start	-	1	116	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026491	Ahctf1	ENSMUST00000145968	ENSMUSP00000115795	TRANSLATION	protein_coding	start/stop	-	5	176	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026491	Ahctf1	ENSMUST00000192645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026156	B3gat2	ENSMUST00000063663	ENSMUSP00000066582	TRANSLATION	protein_coding	-	CCDS14850.1	1	324	19	3.75	6.3	237	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026156	B3gat2	ENSMUST00000144602	ENSMUSP00000115870	TRANSLATION	protein_coding	-	-	1	104	7	1	0	54.6	0	-4,-2	-	-	0.498	MINOR
ENSMUSG00000026156	B3gat2	ENSMUST00000140583	ENSMUSP00000117089	TRANSLATION	protein_coding	-	-	1	302	17	2	0	169.5	0	-1,-5	-	-	9.12	MINOR
ENSMUSG00000038370	Pcp4l1	ENSMUST00000111332	ENSMUSP00000106964	TRANSLATION	protein_coding	-	CCDS48441.1	1	68	0	1	8.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026048	Ercc5	ENSMUST00000155862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026048	Ercc5	ENSMUST00000139510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026048	Ercc5	ENSMUST00000188376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026048	Ercc5	ENSMUST00000131177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026048	Ercc5	ENSMUST00000137380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026048	Ercc5	ENSMUST00000027214	ENSMUSP00000027214	TRANSLATION	protein_coding	-	CCDS35553.1	1	1170	0	3.39	0.5	201	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026048	Ercc5	ENSMUST00000145406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034107	Ano7	ENSMUST00000058682	ENSMUSP00000050495	TRANSLATION	protein_coding	-	CCDS78656.1	1	843	0	3.28	0.5	757.7	8	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034107	Ano7	ENSMUST00000186641	ENSMUSP00000140438	TRANSLATION	protein_coding	-	CCDS15188.1	5	859	0	3.28	1.5	757.7	8	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000034107	Ano7	ENSMUST00000190340	ENSMUSP00000139733	TRANSLATION	protein_coding	start	-	3	69	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000025909	Sntg1	ENSMUST00000140295	ENSMUSP00000118101	TRANSLATION	protein_coding	-	CCDS35509.1	1	517	0	3.104	2.9	64.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025909	Sntg1	ENSMUST00000144593	ENSMUSP00000123632	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025909	Sntg1	ENSMUST00000134075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025909	Sntg1	ENSMUST00000132064	ENSMUSP00000122134	TRANSLATION	protein_coding	-	CCDS69860.1	5	516	0	3.104	2.9	51.9	0	-4,-5	-	-	10.848	MINOR
ENSMUSG00000025909	Sntg1	ENSMUST00000115484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025909	Sntg1	ENSMUST00000115488	ENSMUSP00000111151	TRANSLATION	protein_coding	-	CCDS35509.1	2	517	0	3.104	2.9	64.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025909	Sntg1	ENSMUST00000194098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025909	Sntg1	ENSMUST00000135046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025909	Sntg1	ENSMUST00000140302	ENSMUSP00000117397	TRANSLATION	nonsense_mediated_decay	-	-	1	187	0	3.104	0	64.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025909	Sntg1	ENSMUST00000126083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025909	Sntg1	ENSMUST00000191683	ENSMUSP00000141839	TRANSLATION	protein_coding	-	CCDS69860.1	1	516	0	3.104	2.9	51.9	0	-4,-5	-	-	10.848	MINOR
ENSMUSG00000051081	Gm4847	ENSMUST00000046662	ENSMUSP00000039839	TRANSLATION	protein_coding	-	CCDS48434.1	1	537	40	3.14	0.5	774.1	0	-2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000026374	Tsn	ENSMUST00000189768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026374	Tsn	ENSMUST00000186608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026374	Tsn	ENSMUST00000188512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026374	Tsn	ENSMUST00000188882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026374	Tsn	ENSMUST00000027623	ENSMUSP00000027623	TRANSLATION	protein_coding	-	CCDS35690.1	1	228	0	5.5	17.5	194.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026374	Tsn	ENSMUST00000186163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049528	Olfr429	ENSMUST00000216346	ENSMUSP00000149257	TRANSLATION	protein_coding	-	CCDS15537.1	2	312	0	0.42	7.6	220.1	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049528	Olfr429	ENSMUST00000060693	ENSMUSP00000051323	TRANSLATION	protein_coding	-	CCDS15537.1	-	312	0	0.42	7.6	220.1	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026260	Ndufa10	ENSMUST00000187098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026260	Ndufa10	ENSMUST00000185251	ENSMUSP00000140457	TRANSLATION	protein_coding	stop	-	3	89	2	2.25	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026260	Ndufa10	ENSMUST00000187141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026260	Ndufa10	ENSMUST00000153897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026260	Ndufa10	ENSMUST00000185466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026260	Ndufa10	ENSMUST00000189582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026260	Ndufa10	ENSMUST00000027478	ENSMUSP00000027478	TRANSLATION	protein_coding	-	CCDS15167.1	1	355	12	8.5	2.7	122.6	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000026260	Ndufa10	ENSMUST00000189503	ENSMUSP00000140576	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000025978	Rftn2	ENSMUST00000133294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025978	Rftn2	ENSMUST00000027121	ENSMUSP00000027121	TRANSLATION	protein_coding	-	CCDS14962.1	1	500	0	0	0.5	609.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025978	Rftn2	ENSMUST00000132055	ENSMUSP00000137942	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	97.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025978	Rftn2	ENSMUST00000114428	ENSMUSP00000110071	TRANSLATION	protein_coding	-	-	1	344	0	0	0	374.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025978	Rftn2	ENSMUST00000141107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046643	Olfr218	ENSMUST00000057548	ENSMUSP00000053317	TRANSLATION	protein_coding	-	CCDS15524.1	-	313	0	0.42	5.2	193.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046643	Olfr218	ENSMUST00000215844	ENSMUSP00000149832	TRANSLATION	protein_coding	-	CCDS15524.1	5	313	0	0.42	5.2	193.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046643	Olfr218	ENSMUST00000216603	ENSMUSP00000150815	TRANSLATION	protein_coding	-	CCDS15524.1	5	313	0	0.42	5.2	193.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036155	Mgat5	ENSMUST00000171405	ENSMUSP00000129166	TRANSLATION	protein_coding	-	CCDS15245.1	1	740	0	0	11.7	1082.2	1	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036155	Mgat5	ENSMUST00000038361	ENSMUSP00000038359	TRANSLATION	protein_coding	-	CCDS15245.1	1	740	0	0	11.7	1082.2	1	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036155	Mgat5	ENSMUST00000190921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036155	Mgat5	ENSMUST00000189427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000186492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000145144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000156012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000131738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026201	Stk16	ENSMUST00000139627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000191108	ENSMUSP00000139846	TRANSLATION	nonsense_mediated_decay	-	-	1	227	0	3.948	0	94	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026201	Stk16	ENSMUST00000186350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000144355	ENSMUSP00000115964	TRANSLATION	protein_coding	stop	-	2	132	0	1.75	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026201	Stk16	ENSMUST00000135484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000142052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026201	Stk16	ENSMUST00000189242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000188460	ENSMUSP00000139998	TRANSLATION	protein_coding	stop	-	5	187	0	4.75	2.4	77.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026201	Stk16	ENSMUST00000189698	ENSMUSP00000140329	TRANSLATION	protein_coding	stop	-	5	219	0	4.75	0	108.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026201	Stk16	ENSMUST00000027401	ENSMUSP00000027401	TRANSLATION	protein_coding	-	CCDS15067.1	1	305	0	6.75	11	156.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026201	Stk16	ENSMUST00000126328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026201	Stk16	ENSMUST00000123825	ENSMUSP00000122688	TRANSLATION	protein_coding	stop	-	2	132	0	1.75	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025933	Tmem14a	ENSMUST00000027064	ENSMUSP00000027064	TRANSLATION	protein_coding	-	CCDS69867.1	1	145	0	2.5	0.5	82.4	2	-3,-5	-	-	11.094	MINOR
ENSMUSG00000025933	Tmem14a	ENSMUST00000027065	ENSMUSP00000027065	TRANSLATION	protein_coding	-	CCDS35523.1	1	99	0	2.7	7.7	89.3	3	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025774	Crisp4	ENSMUST00000115344	ENSMUSP00000111001	TRANSLATION	protein_coding	-	CCDS83531.1	1	293	0	5.2	0.5	130.9	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000025774	Crisp4	ENSMUST00000130669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025774	Crisp4	ENSMUST00000026876	ENSMUSP00000026876	TRANSLATION	protein_coding	-	CCDS83530.1	1	254	0	5.2	0.5	130.9	0	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000025774	Crisp4	ENSMUST00000115340	ENSMUSP00000110997	TRANSLATION	protein_coding	-	-	1	250	0	5.2	0.5	130.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000026628	Atf3	ENSMUST00000131854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026628	Atf3	ENSMUST00000027941	ENSMUSP00000027941	TRANSLATION	protein_coding	-	CCDS15616.1	1	181	0	1.4	17	43.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026628	Atf3	ENSMUST00000195117	ENSMUSP00000141492	TRANSLATION	protein_coding	-	CCDS15616.1	1	181	0	1.4	17	43.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000040843	Tiprl	ENSMUST00000142191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040843	Tiprl	ENSMUST00000192436	ENSMUSP00000141708	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040843	Tiprl	ENSMUST00000195248	ENSMUSP00000142327	TRANSLATION	protein_coding	stop	-	3	47	0	1.5	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040843	Tiprl	ENSMUST00000156102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040843	Tiprl	ENSMUST00000043235	ENSMUSP00000037514	TRANSLATION	protein_coding	-	CCDS15441.1	1	271	0	7.25	7.5	222.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000040843	Tiprl	ENSMUST00000192726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026495	Efcab2	ENSMUST00000192905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026495	Efcab2	ENSMUST00000027775	ENSMUSP00000027775	TRANSLATION	protein_coding	-	CCDS15557.1	1	164	3	3.212	6.3	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000026495	Efcab2	ENSMUST00000194861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026224	4933407L21Rik	ENSMUST00000188949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026224	4933407L21Rik	ENSMUST00000027426	ENSMUSP00000027426	TRANSLATION	protein_coding	-	-	1	131	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000026224	4933407L21Rik	ENSMUST00000129392	ENSMUSP00000116804	TRANSLATION	protein_coding	-	-	3	62	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000052534	Pbx1	ENSMUST00000176790	ENSMUSP00000134925	TRANSLATION	protein_coding	-	CCDS15462.1	1	347	0	2	15.5	386.1	0	-4,-5	-	-	15.516	ALTERNATIVE:1
ENSMUSG00000052534	Pbx1	ENSMUST00000176540	ENSMUSP00000135516	TRANSLATION	protein_coding	-	CCDS15461.1	1	430	0	2	17.5	386.1	0	-4,-5	-	-	16	PRINCIPAL:4
ENSMUSG00000052534	Pbx1	ENSMUST00000176482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052534	Pbx1	ENSMUST00000064438	ENSMUSP00000066385	TRANSLATION	protein_coding	-	CCDS78739.1	1	339	0	1	0.5	359.7	0	-4,-5	-	-	7.416	MINOR
ENSMUSG00000052534	Pbx1	ENSMUST00000176791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052534	Pbx1	ENSMUST00000097471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052534	Pbx1	ENSMUST00000188912	ENSMUSP00000140606	TRANSLATION	protein_coding	-	CCDS15462.1	1	347	0	2	15.5	386.1	0	-4,-5	-	-	15.516	ALTERNATIVE:1
ENSMUSG00000052534	Pbx1	ENSMUST00000072863	ENSMUSP00000072640	TRANSLATION	protein_coding	-	CCDS15462.1	1	347	0	2	15.5	386.1	0	-4,-5	-	-	15.516	ALTERNATIVE:1
ENSMUSG00000026632	Tatdn3	ENSMUST00000110891	ENSMUSP00000106516	TRANSLATION	protein_coding	-	CCDS48486.1	1	232	7	6.33	0.5	150.8	0	-4,-5	-	-	13.854	MINOR
ENSMUSG00000026632	Tatdn3	ENSMUST00000027945	ENSMUSP00000027945	TRANSLATION	protein_coding	-	-	3	293	7	7.18	0.5	186.2	0	-4,-5	-	-	17.676	ALTERNATIVE:2
ENSMUSG00000026632	Tatdn3	ENSMUST00000156341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026632	Tatdn3	ENSMUST00000124497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026632	Tatdn3	ENSMUST00000156527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026632	Tatdn3	ENSMUST00000110893	ENSMUSP00000106518	TRANSLATION	protein_coding	-	CCDS48485.1	1	294	7	7.33	0.5	186.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000026632	Tatdn3	ENSMUST00000153757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026632	Tatdn3	ENSMUST00000143876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026632	Tatdn3	ENSMUST00000085633	ENSMUSP00000082773	TRANSLATION	protein_coding	-	CCDS48484.1	1	189	5	4.58	0.5	103.3	0	-4,-5	-	-	5.784	MINOR
ENSMUSG00000026520	Pycr2	ENSMUST00000194253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026520	Pycr2	ENSMUST00000195270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026520	Pycr2	ENSMUST00000027802	ENSMUSP00000027802	TRANSLATION	protein_coding	-	CCDS15576.1	1	320	22	6.5	8.8	196.3	0	-3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026520	Pycr2	ENSMUST00000194026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026180	Cxcr2	ENSMUST00000106899	ENSMUSP00000102512	TRANSLATION	protein_coding	-	CCDS15040.1	1	359	0	1	1.5	177.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026180	Cxcr2	ENSMUST00000027372	ENSMUSP00000027372	TRANSLATION	protein_coding	-	CCDS15040.1	5	359	0	1	1.5	177.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000113925	Gm7544	ENSMUST00000222426	ENSMUSP00000152303	TRANSLATION	protein_coding	-	-	-	118	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026394	Atp6v1g3	ENSMUST00000027643	ENSMUSP00000027643	TRANSLATION	protein_coding	-	CCDS15331.1	1	118	0	2.15	12.8	120.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026304	Rab17	ENSMUST00000027529	ENSMUSP00000027529	TRANSLATION	protein_coding	-	CCDS15156.1	1	214	19	4.1	1.5	186.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026304	Rab17	ENSMUST00000131428	ENSMUSP00000122178	TRANSLATION	protein_coding	-	CCDS15156.1	1	214	19	4.1	1.5	186.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026304	Rab17	ENSMUST00000128226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026304	Rab17	ENSMUST00000130042	ENSMUSP00000114240	TRANSLATION	protein_coding	stop	-	3	145	16	2.8	0	143.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026304	Rab17	ENSMUST00000135819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037216	Lipt1	ENSMUST00000128085	ENSMUSP00000119243	TRANSLATION	protein_coding	stop	-	3	159	11	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037216	Lipt1	ENSMUST00000142670	ENSMUSP00000122160	TRANSLATION	protein_coding	stop	-	2	198	21	2	0	21.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037216	Lipt1	ENSMUST00000041621	ENSMUSP00000038739	TRANSLATION	protein_coding	-	CCDS14895.1	1	373	24	4	1.5	21.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037216	Lipt1	ENSMUST00000144440	ENSMUSP00000115465	TRANSLATION	protein_coding	stop	-	3	230	24	3	0	21.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000089960	Ugt1a1	ENSMUST00000073049	ENSMUSP00000072803	TRANSLATION	protein_coding	-	CCDS15143.1	1	535	18	3.12	1.5	794.4	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000050777	Tmem37	ENSMUST00000056089	ENSMUSP00000050862	TRANSLATION	protein_coding	-	CCDS15229.1	1	211	0	0	1.5	323.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000006014	Prg4	ENSMUST00000006171	ENSMUSP00000006171	TRANSLATION	protein_coding	-	CCDS48391.1	1	423	0	4.695	0.5	150.9	0	4,-1	-	-	4.998	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000111902	ENSMUSP00000107533	TRANSLATION	protein_coding	-	-	5	1012	0	4.195	0	158.7	0	4,-1	-	-	4.002	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000161320	ENSMUSP00000124801	TRANSLATION	protein_coding	stop	-	5	179	0	1.6	0	45.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000159035	ENSMUSP00000124410	TRANSLATION	protein_coding	stop	-	5	99	0	1.35	0	45.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000164600	ENSMUSP00000128943	TRANSLATION	protein_coding	-	CCDS48392.1	5	1221	0	5.195	0.5	289	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000006014	Prg4	ENSMUST00000162367	ENSMUSP00000125551	TRANSLATION	protein_coding	-	CCDS48391.1	1	423	0	4.695	0.5	150.9	0	4,-1	-	-	4.998	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000111901	ENSMUSP00000107532	TRANSLATION	protein_coding	-	-	5	965	0	4.695	0	197.6	0	4,-1	-	-	5.514	MINOR
ENSMUSG00000006014	Prg4	ENSMUST00000161611	ENSMUSP00000125677	TRANSLATION	protein_coding	-	CCDS48392.1	5	1221	0	5.195	0.5	289	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026239	Pde6d	ENSMUST00000146220	ENSMUSP00000137820	TRANSLATION	protein_coding	-	-	2	124	0	3.5	0	129.2	0	-4,-5	-	-	8.85	MINOR
ENSMUSG00000026239	Pde6d	ENSMUST00000143674	ENSMUSP00000137956	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	1.5	0	25.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026239	Pde6d	ENSMUST00000027444	ENSMUSP00000027444	TRANSLATION	protein_coding	-	CCDS15121.1	1	150	0	4.25	16.2	156.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026239	Pde6d	ENSMUST00000150653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026239	Pde6d	ENSMUST00000148683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089844	A530032D15Rik	ENSMUST00000160792	ENSMUSP00000125122	TRANSLATION	protein_coding	-	CCDS15107.1	1	211	0	0	0.5	129.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000089844	A530032D15Rik	ENSMUST00000161675	ENSMUSP00000123812	TRANSLATION	protein_coding	stop	-	5	122	0	0	0	129.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089844	A530032D15Rik	ENSMUST00000161724	ENSMUSP00000123750	TRANSLATION	protein_coding	-	-	5	215	0	0	0	129.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000056870	Gulp1	ENSMUST00000161066	ENSMUSP00000125346	TRANSLATION	protein_coding	stop	-	3	14	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056870	Gulp1	ENSMUST00000162600	ENSMUSP00000124756	TRANSLATION	protein_coding	-	-	5	299	0	3.802	1.5	110.9	0	-4,-6	-	-	12.172	MINOR
ENSMUSG00000056870	Gulp1	ENSMUST00000161793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056870	Gulp1	ENSMUST00000160854	ENSMUSP00000125506	TRANSLATION	protein_coding	-	-	1	309	0	3.802	0	110.9	0	-4,-6	-	-	12	MINOR
ENSMUSG00000056870	Gulp1	ENSMUST00000074525	ENSMUSP00000074115	TRANSLATION	protein_coding	-	CCDS48250.1	1	304	0	3.802	12.5	110.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000056870	Gulp1	ENSMUST00000159555	ENSMUSP00000124835	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0.198	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025983	Ccdc150	ENSMUST00000163072	ENSMUSP00000158733	TRANSLATION	protein_coding	-	-	5	582	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000025983	Ccdc150	ENSMUST00000027128	ENSMUSP00000027128	TRANSLATION	protein_coding	-	CCDS35564.1	1	1110	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000025983	Ccdc150	ENSMUST00000161988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025983	Ccdc150	ENSMUST00000160472	ENSMUSP00000125195	TRANSLATION	nonsense_mediated_decay	-	-	1	580	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025983	Ccdc150	ENSMUST00000159682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070645	Ren1	ENSMUST00000094556	ENSMUSP00000092135	TRANSLATION	protein_coding	-	CCDS15295.1	1	402	7	8.6	2.7	416.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000070645	Ren1	ENSMUST00000112287	ENSMUSP00000107906	TRANSLATION	protein_coding	stop	-	1	44	2	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026434	Nucks1	ENSMUST00000189946	ENSMUSP00000140818	TRANSLATION	protein_coding	-	CCDS78678.1	1	233	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000026434	Nucks1	ENSMUST00000062264	ENSMUSP00000062576	TRANSLATION	protein_coding	-	CCDS48356.1	1	234	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000026434	Nucks1	ENSMUST00000187405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037351	Actr1b	ENSMUST00000043951	ENSMUSP00000047326	TRANSLATION	protein_coding	-	CCDS14887.1	1	376	25	10.41	19.5	445.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037351	Actr1b	ENSMUST00000160043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037351	Actr1b	ENSMUST00000162662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037351	Actr1b	ENSMUST00000160084	ENSMUSP00000125472	TRANSLATION	protein_coding	stop	-	5	142	6	3.5	0	166	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037351	Actr1b	ENSMUST00000159448	ENSMUSP00000124343	TRANSLATION	protein_coding	stop	-	2	149	7	3.83	0	174.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037351	Actr1b	ENSMUST00000162684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037351	Actr1b	ENSMUST00000159675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064272	Gpbar1	ENSMUST00000077985	ENSMUSP00000077135	TRANSLATION	protein_coding	-	CCDS15042.1	-	329	0	0.36	2.7	57.1	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073643	Wdfy1	ENSMUST00000138319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073643	Wdfy1	ENSMUST00000127771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073643	Wdfy1	ENSMUST00000125641	ENSMUSP00000118431	TRANSLATION	protein_coding	stop	-	5	75	0	1.02	0	16.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073643	Wdfy1	ENSMUST00000186464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073643	Wdfy1	ENSMUST00000113512	ENSMUSP00000109140	TRANSLATION	protein_coding	-	CCDS48296.1	1	410	8	7.17	16.1	131.8	0	-4,-7	-	-	21.922	PRINCIPAL:1
ENSMUSG00000073643	Wdfy1	ENSMUST00000113513	ENSMUSP00000109141	TRANSLATION	protein_coding	-	-	5	410	8	7.21	16.1	131.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000073643	Wdfy1	ENSMUST00000113514	ENSMUSP00000109142	TRANSLATION	protein_coding	-	-	1	410	8	6.71	16.1	131.8	0	-4,-7	-	-	20.998	PRINCIPAL:1
ENSMUSG00000073643	Wdfy1	ENSMUST00000048820	ENSMUSP00000040224	TRANSLATION	protein_coding	-	CCDS15090.1	1	187	0	2.47	0.5	29.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000073643	Wdfy1	ENSMUST00000130714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073643	Wdfy1	ENSMUST00000113511	ENSMUSP00000109139	TRANSLATION	protein_coding	-	-	5	187	0	2.97	0.5	29.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000073643	Wdfy1	ENSMUST00000113515	ENSMUSP00000109143	TRANSLATION	protein_coding	-	-	1	410	8	7.21	16.1	131.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000073643	Wdfy1	ENSMUST00000143368	ENSMUSP00000123303	TRANSLATION	protein_coding	stop	-	3	182	0	3.07	0	29.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073643	Wdfy1	ENSMUST00000187005	ENSMUSP00000139961	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	1.75	0	16.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073643	Wdfy1	ENSMUST00000113510	ENSMUSP00000109138	TRANSLATION	protein_coding	-	-	1	187	0	2.97	0.5	29.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026259	Ngef	ENSMUST00000168235	ENSMUSP00000127674	TRANSLATION	protein_coding	start	-	3	245	0	3.35	0	27.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026259	Ngef	ENSMUST00000027477	ENSMUSP00000027477	TRANSLATION	protein_coding	-	CCDS48306.1	1	620	0	6.15	2.9	193.6	0	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000026259	Ngef	ENSMUST00000166463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026259	Ngef	ENSMUST00000068681	ENSMUSP00000066894	TRANSLATION	protein_coding	-	CCDS48307.1	1	710	0	6.15	0.5	193.6	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000026585	Kifap3	ENSMUST00000077642	ENSMUSP00000076830	TRANSLATION	protein_coding	-	CCDS35751.1	1	772	0	0	4.1	1378.2	0	-4,-5	-	-	7.119	MINOR
ENSMUSG00000026585	Kifap3	ENSMUST00000027877	ENSMUSP00000027877	TRANSLATION	protein_coding	-	CCDS78729.1	1	793	0	0	9.3	1378.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026087	Mrpl30	ENSMUST00000194857	ENSMUSP00000142168	TRANSLATION	protein_coding	stop	-	1	128	0	3.41	0	50.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026087	Mrpl30	ENSMUST00000193673	ENSMUSP00000141654	TRANSLATION	protein_coding	-	CCDS14896.1	2	160	0	4.41	5.1	50.1	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026087	Mrpl30	ENSMUST00000160082	ENSMUSP00000141883	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026087	Mrpl30	ENSMUST00000161694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026087	Mrpl30	ENSMUST00000027256	ENSMUSP00000027256	TRANSLATION	protein_coding	-	CCDS14896.1	1	160	0	4.41	5.1	50.1	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026087	Mrpl30	ENSMUST00000162513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026087	Mrpl30	ENSMUST00000195373	ENSMUSP00000141693	TRANSLATION	protein_coding	-	CCDS14896.1	2	160	0	4.41	5.1	50.1	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026395	Ptprc	ENSMUST00000188596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000185570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000182283	ENSMUSP00000138800	TRANSLATION	protein_coding	-	CCDS15330.2	1	1154	11	20.344	0.5	646.5	2	2,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000026395	Ptprc	ENSMUST00000193650	ENSMUSP00000141524	TRANSLATION	protein_coding	stop	-	5	94	0	0	0	52.5	0	2,-1	-	-	-1	MINOR
ENSMUSG00000026395	Ptprc	ENSMUST00000112036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000195533	ENSMUSP00000142052	TRANSLATION	protein_coding	stop	-	5	212	0	1.814	0	118.1	0	2,-1	-	-	-1	MINOR
ENSMUSG00000026395	Ptprc	ENSMUST00000186628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000183301	ENSMUSP00000138350	TRANSLATION	protein_coding	-	CCDS48383.2	5	1293	11	20.344	0.5	646.5	2	2,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000026395	Ptprc	ENSMUST00000187586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000182755	ENSMUSP00000138275	TRANSLATION	protein_coding	-	CCDS59542.1	1	1130	11	20.344	0.5	646.5	2	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000026395	Ptprc	ENSMUST00000182138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000183262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026395	Ptprc	ENSMUST00000183229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053318	Slamf8	ENSMUST00000193843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053318	Slamf8	ENSMUST00000065679	ENSMUSP00000067527	TRANSLATION	protein_coding	-	CCDS15517.1	1	278	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000036500	Akp3	ENSMUST00000044878	ENSMUSP00000037497	TRANSLATION	protein_coding	-	CCDS15127.1	1	559	12	10.05	0.5	610.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000036500	Akp3	ENSMUST00000187662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026721	Rabgap1l	ENSMUST00000192281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026721	Rabgap1l	ENSMUST00000028049	ENSMUSP00000028049	TRANSLATION	protein_coding	-	CCDS15408.1	1	815	0	10.16	5.2	329.9	3	-4,-5	-	-	13.614	PRINCIPAL:1
ENSMUSG00000026721	Rabgap1l	ENSMUST00000028052	ENSMUSP00000028052	TRANSLATION	protein_coding	-	CCDS15407.1	1	370	0	2.6	8.8	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000191909	ENSMUSP00000141688	TRANSLATION	protein_coding	start/stop	-	3	230	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000194623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026721	Rabgap1l	ENSMUST00000195442	ENSMUSP00000141666	TRANSLATION	protein_coding	-	-	1	477	0	1.16	0	134.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000191651	ENSMUSP00000141357	TRANSLATION	protein_coding	start	-	3	107	0	3	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000193185	ENSMUSP00000142258	TRANSLATION	protein_coding	start/stop	-	3	234	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000235109	ENSMUSP00000157276	TRANSLATION	protein_coding	start/stop	-	-	198	0	4.1	0	37.2	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000194696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026721	Rabgap1l	ENSMUST00000192019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026721	Rabgap1l	ENSMUST00000193115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026721	Rabgap1l	ENSMUST00000194824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026721	Rabgap1l	ENSMUST00000193810	ENSMUSP00000141749	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000191941	ENSMUSP00000141790	TRANSLATION	nonsense_mediated_decay	start	-	1	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026721	Rabgap1l	ENSMUST00000195114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026721	Rabgap1l	ENSMUST00000193729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016918	Sulf1	ENSMUST00000189447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016918	Sulf1	ENSMUST00000180062	ENSMUSP00000136014	TRANSLATION	protein_coding	-	CCDS14820.1	1	870	5	4.9	3.9	372.5	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000016918	Sulf1	ENSMUST00000186405	ENSMUSP00000140891	TRANSLATION	protein_coding	stop	-	1	37	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000016918	Sulf1	ENSMUST00000088585	ENSMUSP00000085949	TRANSLATION	protein_coding	-	CCDS14820.1	1	870	5	4.9	3.9	372.5	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000016918	Sulf1	ENSMUST00000185780	ENSMUSP00000140517	TRANSLATION	protein_coding	start	-	1	372	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016918	Sulf1	ENSMUST00000187376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016918	Sulf1	ENSMUST00000186051	ENSMUSP00000141153	TRANSLATION	protein_coding	-	-	1	862	5	4.9	0	372.5	0	2,-3	-	-	17	ALTERNATIVE:2
ENSMUSG00000016918	Sulf1	ENSMUST00000189541	ENSMUSP00000140640	TRANSLATION	protein_coding	stop	-	3	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016918	Sulf1	ENSMUST00000177608	ENSMUSP00000137523	TRANSLATION	protein_coding	-	CCDS14820.1	1	870	5	4.9	3.9	372.5	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000016918	Sulf1	ENSMUST00000186674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063583	Olfr1410	ENSMUST00000216553	ENSMUSP00000149607	TRANSLATION	protein_coding	-	CCDS78650.1	5	322	0	0.2	1.5	167.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063583	Olfr1410	ENSMUST00000079790	ENSMUSP00000078720	TRANSLATION	protein_coding	stop	-	5	323	0	0.2	1.5	167.9	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000063583	Olfr1410	ENSMUST00000217316	ENSMUSP00000149621	TRANSLATION	protein_coding	-	CCDS78650.1	5	322	0	0.2	1.5	167.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073492	Gm10521	ENSMUST00000097466	ENSMUSP00000095074	TRANSLATION	protein_coding	-	-	-	135	0	0	0	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000026227	2810459M11Rik	ENSMUST00000027429	ENSMUSP00000027429	TRANSLATION	protein_coding	-	CCDS78641.1	1	286	0	0	1.5	239.7	0	-4,-5	-	-	5.562	ALTERNATIVE:2
ENSMUSG00000026227	2810459M11Rik	ENSMUST00000165824	ENSMUSP00000131459	TRANSLATION	protein_coding	-	CCDS48302.1	1	287	0	0	1.5	247	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000026691	Fmo3	ENSMUST00000028010	ENSMUSP00000028010	TRANSLATION	protein_coding	-	CCDS15426.1	1	534	31	3.12	5.1	940.5	0	-3,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026691	Fmo3	ENSMUST00000142759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026494	Kif26b	ENSMUST00000161017	ENSMUSP00000124462	TRANSLATION	protein_coding	-	CCDS48464.1	1	2112	10	4.12	0.5	205	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000026494	Kif26b	ENSMUST00000160789	ENSMUSP00000124608	TRANSLATION	protein_coding	-	-	1	1665	10	4.12	0	205	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000026494	Kif26b	ENSMUST00000193931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036251	Trpm8	ENSMUST00000171176	ENSMUSP00000131209	TRANSLATION	protein_coding	-	CCDS48316.1	1	1104	0	0	5.1	0	3	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000036251	Trpm8	ENSMUST00000113114	ENSMUSP00000108739	TRANSLATION	protein_coding	-	CCDS48316.1	1	1104	0	0	5.1	0	3	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000036251	Trpm8	ENSMUST00000040210	ENSMUSP00000036991	TRANSLATION	protein_coding	-	CCDS48316.1	5	1104	0	0	5.1	0	3	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000036251	Trpm8	ENSMUST00000148138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026417	Pigr	ENSMUST00000027675	ENSMUSP00000027675	TRANSLATION	protein_coding	-	CCDS15260.1	1	771	0	5.75	0.5	168.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026417	Pigr	ENSMUST00000133792	ENSMUSP00000121686	TRANSLATION	protein_coding	stop	-	3	211	0	2.33	0	56.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026417	Pigr	ENSMUST00000137782	ENSMUSP00000114334	TRANSLATION	protein_coding	stop	-	3	200	0	2	0	56.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026058	Khdrbs2	ENSMUST00000186984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026058	Khdrbs2	ENSMUST00000027226	ENSMUSP00000027226	TRANSLATION	protein_coding	-	CCDS14861.1	1	349	0	5.65	12.8	207.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026058	Khdrbs2	ENSMUST00000188257	ENSMUSP00000140157	TRANSLATION	protein_coding	-	-	1	193	0	2.8	0	134.4	0	-4,-5	-	-	1.908	MINOR
ENSMUSG00000026058	Khdrbs2	ENSMUST00000185666	ENSMUSP00000140451	TRANSLATION	protein_coding	-	-	2	92	0	1.8	0	101.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026058	Khdrbs2	ENSMUST00000189878	ENSMUSP00000141095	TRANSLATION	protein_coding	-	-	1	91	0	1.8	0	101.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026175	Vil1	ENSMUST00000159749	ENSMUSP00000123786	TRANSLATION	protein_coding	start/stop	-	5	248	6	5.28	0	117.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026175	Vil1	ENSMUST00000027366	ENSMUSP00000027366	TRANSLATION	protein_coding	-	CCDS15049.1	1	827	6	17.69	7.5	393.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000026175	Vil1	ENSMUST00000161087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026175	Vil1	ENSMUST00000163018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025931	Paqr8	ENSMUST00000187651	ENSMUSP00000140913	TRANSLATION	protein_coding	-	CCDS14844.1	5	354	0	0.42	7.6	173.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025931	Paqr8	ENSMUST00000189400	ENSMUSP00000141054	TRANSLATION	protein_coding	-	CCDS14844.1	1	354	0	0.42	7.6	173.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025931	Paqr8	ENSMUST00000068880	ENSMUSP00000069127	TRANSLATION	protein_coding	-	CCDS14844.1	1	354	0	0.42	7.6	173.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025931	Paqr8	ENSMUST00000167119	ENSMUSP00000128781	TRANSLATION	protein_coding	-	CCDS14844.1	1	354	0	0.42	7.6	173.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000046367	Mgat4e	ENSMUST00000185836	ENSMUSP00000139781	TRANSLATION	nonsense_mediated_decay	start	-	1	28	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046367	Mgat4e	ENSMUST00000172898	ENSMUSP00000133717	TRANSLATION	protein_coding	-	CCDS48370.1	2	439	0	0	0.5	196.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046367	Mgat4e	ENSMUST00000052911	ENSMUSP00000125929	TRANSLATION	protein_coding	-	CCDS48370.1	5	439	0	0	0.5	196.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000005339	Fcer1a	ENSMUST00000049706	ENSMUSP00000056882	TRANSLATION	protein_coding	-	CCDS35788.1	1	250	0	3.226	0.5	63.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000005339	Fcer1a	ENSMUST00000193017	ENSMUSP00000141932	TRANSLATION	protein_coding	-	-	1	194	0	2.16	0	32.9	1	-4,-6	-	-	6.978	MINOR
ENSMUSG00000057037	Cfhr1	ENSMUST00000023965	ENSMUSP00000023965	TRANSLATION	protein_coding	-	CCDS15337.1	1	343	0	5.8	0.5	137.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000057037	Cfhr1	ENSMUST00000161224	ENSMUSP00000142078	TRANSLATION	protein_coding	start	-	5	111	0	2	0	64.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026430	Rassf5	ENSMUST00000212202	ENSMUSP00000148646	TRANSLATION	protein_coding	-	-	5	313	4	6.08	0	116.9	0	-2,1	-	-	10.326	MINOR
ENSMUSG00000026430	Rassf5	ENSMUST00000124796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026430	Rassf5	ENSMUST00000068564	ENSMUSP00000067011	TRANSLATION	protein_coding	-	CCDS78675.1	1	265	0	5.08	5.1	116.9	0	-4,-5	-	-	8.33	MINOR
ENSMUSG00000026430	Rassf5	ENSMUST00000027688	ENSMUSP00000027688	TRANSLATION	protein_coding	-	CCDS15268.1	1	413	10	6.88	3.9	151.4	0	-4,-5	-	-	19.414	PRINCIPAL:1
ENSMUSG00000026430	Rassf5	ENSMUST00000112442	ENSMUSP00000108061	TRANSLATION	protein_coding	-	CCDS83589.1	1	321	10	3.95	0.5	34.5	0	-4,-5	-	-	6.138	MINOR
ENSMUSG00000051985	Igfn1	ENSMUST00000166193	ENSMUSP00000129680	TRANSLATION	protein_coding	-	CCDS48379.1	1	2849	0	14.755	0.5	363.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051985	Igfn1	ENSMUST00000124134	ENSMUSP00000119230	TRANSLATION	protein_coding	start/stop	-	1	1221	0	14.425	0	358.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051985	Igfn1	ENSMUST00000140703	ENSMUSP00000139810	TRANSLATION	nonsense_mediated_decay	start	-	2	208	0	2.615	0	85.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026147	Col9a1	ENSMUST00000124600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026147	Col9a1	ENSMUST00000054588	ENSMUSP00000051579	TRANSLATION	protein_coding	-	CCDS35527.1	1	921	0	19.543	5.3	179.1	0	2,-2	-	-	12.35	PRINCIPAL:1
ENSMUSG00000026147	Col9a1	ENSMUST00000088349	ENSMUSP00000085687	TRANSLATION	protein_coding	-	CCDS69871.1	1	680	0	15.563	4.1	206.6	0	4,-3	-	-	7.442	MINOR
ENSMUSG00000026147	Col9a1	ENSMUST00000147902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004364	Cul3	ENSMUST00000163119	ENSMUSP00000130738	TRANSLATION	protein_coding	-	CCDS15094.1	1	768	0	15.13	15.3	850.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000004364	Cul3	ENSMUST00000167794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004364	Cul3	ENSMUST00000167293	ENSMUSP00000126630	TRANSLATION	nonsense_mediated_decay	start	-	5	85	0	2.316	0	55.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004364	Cul3	ENSMUST00000164108	ENSMUSP00000131891	TRANSLATION	protein_coding	-	-	5	702	0	13.38	4.8	782	0	-4,-7	-	-	5.474	MINOR
ENSMUSG00000004364	Cul3	ENSMUST00000170897	ENSMUSP00000130010	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	1.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004364	Cul3	ENSMUST00000168372	ENSMUSP00000132485	TRANSLATION	protein_coding	start	-	2	111	0	1.54	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026656	Fcgr2b	ENSMUST00000159969	ENSMUSP00000137669	TRANSLATION	protein_coding	-	CCDS35770.1	1	340	0	2.478	0.5	84.9	3	0,-3	-	-	12	PRINCIPAL:4
ENSMUSG00000026656	Fcgr2b	ENSMUST00000027966	ENSMUSP00000027966	TRANSLATION	protein_coding	-	CCDS35770.1	1	340	0	2.478	0.5	84.9	3	0,-3	-	-	12	PRINCIPAL:4
ENSMUSG00000026656	Fcgr2b	ENSMUST00000160106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026656	Fcgr2b	ENSMUST00000161503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026656	Fcgr2b	ENSMUST00000161730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026656	Fcgr2b	ENSMUST00000081103	ENSMUSP00000079882	TRANSLATION	protein_coding	-	CCDS35769.1	1	293	0	2.478	0.5	84.9	3	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000026656	Fcgr2b	ENSMUST00000159688	ENSMUSP00000123774	TRANSLATION	protein_coding	-	-	1	312	0	2.478	0	84.9	3	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000009907	Vps4b	ENSMUST00000147705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009907	Vps4b	ENSMUST00000112736	ENSMUSP00000108356	TRANSLATION	protein_coding	-	CCDS15211.1	1	444	11	9.83	10.8	324.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000009907	Vps4b	ENSMUST00000190531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009907	Vps4b	ENSMUST00000094646	ENSMUSP00000092230	TRANSLATION	protein_coding	-	CCDS15211.1	1	444	11	9.83	10.8	324.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000009907	Vps4b	ENSMUST00000126057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009907	Vps4b	ENSMUST00000127606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010290	AI597479	ENSMUST00000010434	ENSMUSP00000010434	TRANSLATION	protein_coding	-	CCDS14921.1	1	232	1	0	7.5	269.6	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000009905	Kdsr	ENSMUST00000187319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009905	Kdsr	ENSMUST00000187617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009905	Kdsr	ENSMUST00000010049	ENSMUSP00000010049	TRANSLATION	protein_coding	-	CCDS15210.1	1	332	28	4.7	3.8	195.3	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000062209	Erbb4	ENSMUST00000119142	ENSMUSP00000112713	TRANSLATION	protein_coding	-	-	5	1308	2	22.83	8.8	772.4	1	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000062209	Erbb4	ENSMUST00000153432	ENSMUSP00000115373	TRANSLATION	protein_coding	stop	-	5	732	0	16.08	0	464.7	1	2,-2	-	-	-1	MINOR
ENSMUSG00000062209	Erbb4	ENSMUST00000131148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062209	Erbb4	ENSMUST00000126682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062209	Erbb4	ENSMUST00000121473	ENSMUSP00000114123	TRANSLATION	protein_coding	-	CCDS48285.1	1	1292	2	22.83	5.3	772.4	1	2,-2	-	-	15.653	MINOR
ENSMUSG00000050526	Mgat4f	ENSMUST00000162187	ENSMUSP00000124251	TRANSLATION	protein_coding	-	CCDS15307.2	2	479	0	0	0.5	255.3	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000026387	Sctr	ENSMUST00000072886	ENSMUSP00000072660	TRANSLATION	protein_coding	-	CCDS48341.1	2	464	0	8.52	0.5	374.4	6	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000026387	Sctr	ENSMUST00000189037	ENSMUSP00000139932	TRANSLATION	protein_coding	-	CCDS78668.1	1	447	0	8.22	1.5	374.3	6	3,-2	-	-	11.394	ALTERNATIVE:2
ENSMUSG00000025982	Sf3b1	ENSMUST00000189051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025982	Sf3b1	ENSMUST00000185429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025982	Sf3b1	ENSMUST00000188859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025982	Sf3b1	ENSMUST00000027127	ENSMUSP00000027127	TRANSLATION	protein_coding	-	CCDS35567.1	1	1304	0	23.83	17	160.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025982	Sf3b1	ENSMUST00000187500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025982	Sf3b1	ENSMUST00000191303	ENSMUSP00000139469	TRANSLATION	nonsense_mediated_decay	-	-	5	144	0	3.33	4.9	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025982	Sf3b1	ENSMUST00000188419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025982	Sf3b1	ENSMUST00000190175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026208	Des	ENSMUST00000144894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026208	Des	ENSMUST00000027409	ENSMUSP00000027409	TRANSLATION	protein_coding	-	CCDS15071.1	1	469	0	5.55	7.5	467	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000026208	Des	ENSMUST00000125948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026275	Ppp1r7	ENSMUST00000127141	ENSMUSP00000124279	TRANSLATION	nonsense_mediated_decay	start	-	5	109	0	1.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026275	Ppp1r7	ENSMUST00000185498	ENSMUSP00000140544	TRANSLATION	protein_coding	stop	-	3	146	0	2.92	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026275	Ppp1r7	ENSMUST00000027494	ENSMUSP00000027494	TRANSLATION	protein_coding	-	CCDS15187.1	1	361	0	6.93	7.5	121.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048874	Phf3	ENSMUST00000186105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000185604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000191329	ENSMUSP00000139662	TRANSLATION	protein_coding	start	-	3	111	0	0	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048874	Phf3	ENSMUST00000187968	ENSMUSP00000139454	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048874	Phf3	ENSMUST00000186733	ENSMUSP00000139610	TRANSLATION	protein_coding	-	CCDS35530.1	5	2025	7	3.66	0.5	249.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048874	Phf3	ENSMUST00000187600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048874	Phf3	ENSMUST00000088310	ENSMUSP00000085650	TRANSLATION	protein_coding	-	CCDS35530.1	1	2025	7	3.66	0.5	249.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048874	Phf3	ENSMUST00000188780	ENSMUSP00000140935	TRANSLATION	protein_coding	stop	-	2	199	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048874	Phf3	ENSMUST00000190190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000188847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000191245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000187316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048874	Phf3	ENSMUST00000191064	ENSMUSP00000140746	TRANSLATION	nonsense_mediated_decay	-	-	5	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048874	Phf3	ENSMUST00000185521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092572	Serpinb10	ENSMUST00000172762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092572	Serpinb10	ENSMUST00000194951	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000092572	Serpinb10	ENSMUST00000182198	ENSMUSP00000138771	TRANSLATION	protein_coding	-	CCDS48338.1	1	320	0	5	0.5	363.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026456	Cyb5r1	ENSMUST00000186489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026456	Cyb5r1	ENSMUST00000133686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026456	Cyb5r1	ENSMUST00000027726	ENSMUSP00000027726	TRANSLATION	protein_coding	-	CCDS15308.1	1	305	20	7.08	8.8	237.3	0	2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000026456	Cyb5r1	ENSMUST00000172795	ENSMUSP00000133842	TRANSLATION	nonsense_mediated_decay	start	-	5	80	0	0.5	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026456	Cyb5r1	ENSMUST00000172496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026456	Cyb5r1	ENSMUST00000127412	ENSMUSP00000134354	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	1.25	0	29.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026456	Cyb5r1	ENSMUST00000173908	ENSMUSP00000134488	TRANSLATION	protein_coding	stop	-	5	176	19	4.75	0	148.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026456	Cyb5r1	ENSMUST00000130836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026456	Cyb5r1	ENSMUST00000154237	ENSMUSP00000133385	TRANSLATION	nonsense_mediated_decay	-	-	1	228	18	3.25	0	120.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000026456	Cyb5r1	ENSMUST00000174315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026269	Rnpepl1	ENSMUST00000178361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000179531	ENSMUSP00000136959	TRANSLATION	nonsense_mediated_decay	start	-	2	80	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026269	Rnpepl1	ENSMUST00000179837	ENSMUSP00000136670	TRANSLATION	protein_coding	start/stop	-	5	133	0	1.984	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026269	Rnpepl1	ENSMUST00000027487	ENSMUSP00000027487	TRANSLATION	protein_coding	-	CCDS15180.2	1	720	4	11.206	1.5	237.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000026269	Rnpepl1	ENSMUST00000179993	ENSMUSP00000137624	TRANSLATION	protein_coding	start/stop	-	3	173	0	1.96	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026269	Rnpepl1	ENSMUST00000178662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000179854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000180306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000179127	ENSMUSP00000136390	TRANSLATION	protein_coding	start	-	5	375	4	5.702	0	203	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026269	Rnpepl1	ENSMUST00000178778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000178816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026269	Rnpepl1	ENSMUST00000178116	ENSMUSP00000136080	TRANSLATION	nonsense_mediated_decay	start	-	3	172	0	1.96	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026163	Sphkap	ENSMUST00000053075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026163	Sphkap	ENSMUST00000160567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026163	Sphkap	ENSMUST00000159078	ENSMUSP00000124384	TRANSLATION	protein_coding	start	-	1	1400	0	0	0	32.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026163	Sphkap	ENSMUST00000160953	ENSMUSP00000124872	TRANSLATION	protein_coding	-	CCDS48298.1	1	1658	0	0	0.5	32.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026163	Sphkap	ENSMUST00000160237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026336	Slco6d1	ENSMUST00000160796	ENSMUSP00000123850	TRANSLATION	protein_coding	-	CCDS48333.1	1	650	0	0	0.5	395	15	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000026336	Slco6d1	ENSMUST00000162468	ENSMUSP00000125258	TRANSLATION	nonsense_mediated_decay	-	-	1	317	0	0	0	118.5	10	-4,-5	-	-	-1	MINOR
ENSMUSG00000026336	Slco6d1	ENSMUST00000162782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026336	Slco6d1	ENSMUST00000027575	ENSMUSP00000027575	TRANSLATION	protein_coding	-	CCDS48332.1	1	683	0	0	0.5	395	15	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000041570	Camsap2	ENSMUST00000192933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041570	Camsap2	ENSMUST00000194808	ENSMUSP00000142160	TRANSLATION	protein_coding	start	-	1	814	0	2	0	272.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041570	Camsap2	ENSMUST00000192001	ENSMUSP00000142166	TRANSLATION	protein_coding	-	CCDS83597.1	1	1461	0	2	0.5	395.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000041570	Camsap2	ENSMUST00000048309	ENSMUSP00000041920	TRANSLATION	protein_coding	-	-	5	1478	0	2	0.5	395.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000041570	Camsap2	ENSMUST00000194730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041570	Camsap2	ENSMUST00000192314	ENSMUSP00000142299	TRANSLATION	protein_coding	-	CCDS83598.1	1	1472	0	2	1.5	395.3	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000062963	Ufc1	ENSMUST00000152621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062963	Ufc1	ENSMUST00000144576	ENSMUSP00000137977	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	2.566	0	130	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062963	Ufc1	ENSMUST00000080001	ENSMUSP00000078914	TRANSLATION	protein_coding	-	CCDS15488.1	1	167	0	5	15.5	285.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000062963	Ufc1	ENSMUST00000111302	ENSMUSP00000106933	TRANSLATION	protein_coding	-	CCDS15488.1	1	167	0	5	15.5	285.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000062963	Ufc1	ENSMUST00000138974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026197	Zfand2b	ENSMUST00000161106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026197	Zfand2b	ENSMUST00000160282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026197	Zfand2b	ENSMUST00000160439	ENSMUSP00000125086	TRANSLATION	protein_coding	-	CCDS15064.1	5	257	21	4.65	6.3	104.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026197	Zfand2b	ENSMUST00000162768	ENSMUSP00000124552	TRANSLATION	protein_coding	stop	-	5	218	21	3.9	0	104.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026197	Zfand2b	ENSMUST00000027394	ENSMUSP00000027394	TRANSLATION	protein_coding	-	CCDS15064.1	1	257	21	4.65	6.3	104.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026197	Zfand2b	ENSMUST00000161657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026197	Zfand2b	ENSMUST00000160033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026197	Zfand2b	ENSMUST00000186227	ENSMUSP00000139757	TRANSLATION	protein_coding	start	-	3	255	19	4.25	0	96.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026197	Zfand2b	ENSMUST00000160903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026051	Ecrg4	ENSMUST00000027217	ENSMUSP00000027217	TRANSLATION	protein_coding	-	CCDS14925.1	1	148	0	0	7.5	177.6	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000026623	Lpgat1	ENSMUST00000130876	ENSMUSP00000114382	TRANSLATION	protein_coding	stop	-	5	221	2	0	0	33.8	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000026623	Lpgat1	ENSMUST00000133076	ENSMUSP00000115255	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026623	Lpgat1	ENSMUST00000110855	ENSMUSP00000106479	TRANSLATION	protein_coding	-	CCDS15622.1	1	370	2	0	13.5	91.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026623	Lpgat1	ENSMUST00000138494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026623	Lpgat1	ENSMUST00000110856	ENSMUSP00000106480	TRANSLATION	protein_coding	-	CCDS48488.1	1	409	2	0	1.5	91.3	5	-4,-2	-	-	8.16	MINOR
ENSMUSG00000026358	Rgs1	ENSMUST00000169042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026358	Rgs1	ENSMUST00000189061	ENSMUSP00000140624	TRANSLATION	protein_coding	-	CCDS15349.2	1	209	0	4.16	6.3	129.3	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026358	Rgs1	ENSMUST00000170870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026358	Rgs1	ENSMUST00000189916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026358	Rgs1	ENSMUST00000167812	ENSMUSP00000140300	TRANSLATION	nonsense_mediated_decay	start	-	1	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026358	Rgs1	ENSMUST00000185714	ENSMUSP00000140902	TRANSLATION	protein_coding	stop	-	5	129	0	2.56	0	75.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026358	Rgs1	ENSMUST00000167317	ENSMUSP00000139778	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026358	Rgs1	ENSMUST00000169409	ENSMUSP00000126270	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.48	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026358	Rgs1	ENSMUST00000172388	ENSMUSP00000130339	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	1.08	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000050967	Creg2	ENSMUST00000053355	ENSMUSP00000052871	TRANSLATION	protein_coding	-	CCDS14908.1	1	288	0	2.4	0.5	172.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038147	Cd84	ENSMUST00000135386	ENSMUSP00000115674	TRANSLATION	protein_coding	-	CCDS56657.1	1	140	0	1	0.5	0	0	2,-2	-	-	3.66	MINOR
ENSMUSG00000038147	Cd84	ENSMUST00000042302	ENSMUSP00000047024	TRANSLATION	protein_coding	-	CCDS15503.1	1	329	0	1.64	0.5	0	1	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000038147	Cd84	ENSMUST00000136479	ENSMUSP00000122951	TRANSLATION	protein_coding	-	CCDS69979.1	1	328	0	1.64	0.5	0	1	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000038147	Cd84	ENSMUST00000155802	ENSMUSP00000120881	TRANSLATION	protein_coding	-	CCDS15503.1	1	329	0	1.64	0.5	0	1	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000038147	Cd84	ENSMUST00000128189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026219	Trip12	ENSMUST00000187733	ENSMUSP00000140675	TRANSLATION	nonsense_mediated_decay	start	-	3	33	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000027421	ENSMUSP00000027421	TRANSLATION	protein_coding	-	CCDS35633.1	5	2025	5	11.512	6.3	354.9	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000026219	Trip12	ENSMUST00000189496	ENSMUSP00000139682	TRANSLATION	protein_coding	stop	-	5	423	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000190474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000187818	ENSMUSP00000140917	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000185720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000190067	ENSMUSP00000140817	TRANSLATION	protein_coding	stop	-	1	146	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000190464	ENSMUSP00000141035	TRANSLATION	protein_coding	start/stop	-	3	213	0	0.8	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000191187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000186648	ENSMUSP00000139563	TRANSLATION	protein_coding	-	-	5	1992	5	11.092	1.2	286.2	0	-4,-7	-	-	12.114	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000185909	ENSMUSP00000139986	TRANSLATION	nonsense_mediated_decay	-	-	5	346	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000186465	ENSMUSP00000140224	TRANSLATION	protein_coding	-	CCDS35633.1	5	2025	5	11.512	6.3	354.9	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000026219	Trip12	ENSMUST00000189841	ENSMUSP00000140879	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000190125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000186894	ENSMUSP00000140267	TRANSLATION	protein_coding	stop	-	1	982	0	4.93	0	68.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026219	Trip12	ENSMUST00000185567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000185672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026219	Trip12	ENSMUST00000189670	ENSMUSP00000140789	TRANSLATION	protein_coding	start	-	5	830	5	6.582	0	286.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038702	Dsel	ENSMUST00000035462	ENSMUSP00000043570	TRANSLATION	protein_coding	-	CCDS35688.1	1	1207	0	0	1.5	37.9	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000038702	Dsel	ENSMUST00000189731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038702	Dsel	ENSMUST00000186365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038702	Dsel	ENSMUST00000189370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042182	Bend6	ENSMUST00000195350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042182	Bend6	ENSMUST00000126724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042182	Bend6	ENSMUST00000115161	ENSMUSP00000110814	TRANSLATION	protein_coding	-	CCDS78557.1	1	219	0	0	0.5	45.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000042182	Bend6	ENSMUST00000062289	ENSMUSP00000052919	TRANSLATION	protein_coding	-	CCDS35533.1	1	281	0	0	5.3	45.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000042182	Bend6	ENSMUST00000139700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042182	Bend6	ENSMUST00000129464	ENSMUSP00000141053	TRANSLATION	protein_coding	-	-	1	42	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026473	Glul	ENSMUST00000153134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026473	Glul	ENSMUST00000140685	ENSMUSP00000123157	TRANSLATION	protein_coding	-	CCDS15381.1	5	373	28	6	17.5	52.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000026473	Glul	ENSMUST00000139476	ENSMUSP00000114377	TRANSLATION	protein_coding	stop	-	5	198	7	4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026473	Glul	ENSMUST00000086199	ENSMUSP00000083375	TRANSLATION	protein_coding	-	CCDS15381.1	1	373	28	6	17.5	52.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000026473	Glul	ENSMUST00000154576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038949	Cnst	ENSMUST00000143270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038949	Cnst	ENSMUST00000144370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038949	Cnst	ENSMUST00000153962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038949	Cnst	ENSMUST00000040706	ENSMUSP00000048205	TRANSLATION	protein_coding	-	CCDS15562.1	1	711	0	0	0.5	174.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038530	Rgs4	ENSMUST00000027991	ENSMUSP00000027991	TRANSLATION	protein_coding	-	CCDS15465.1	1	205	0	5	6.3	125.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038530	Rgs4	ENSMUST00000111357	ENSMUSP00000106989	TRANSLATION	protein_coding	-	-	5	93	0	2.25	5.6	0	0	-4,-2	-	-	2.234	MINOR
ENSMUSG00000038530	Rgs4	ENSMUST00000132567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079554	Aox2	ENSMUST00000114366	ENSMUSP00000110006	TRANSLATION	protein_coding	-	CCDS35576.1	1	1345	70	31.23	1.5	1087.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015314	Slamf6	ENSMUST00000194561	ENSMUSP00000141944	TRANSLATION	protein_coding	-	CCDS83639.1	1	327	0	1.85	0.5	0	2	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000015314	Slamf6	ENSMUST00000171330	ENSMUSP00000130610	TRANSLATION	protein_coding	-	CCDS15504.1	1	331	0	1.85	0.5	0	2	-3,-4	-	-	6	PRINCIPAL:3
ENSMUSG00000015314	Slamf6	ENSMUST00000195656	ENSMUSP00000141448	TRANSLATION	protein_coding	-	CCDS83638.1	1	351	0	1.85	0.5	0	2	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000015314	Slamf6	ENSMUST00000194182	ENSMUSP00000142242	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015314	Slamf6	ENSMUST00000195206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015314	Slamf6	ENSMUST00000194924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015314	Slamf6	ENSMUST00000193311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010609	Psen2	ENSMUST00000111104	ENSMUSP00000106733	TRANSLATION	protein_coding	-	-	1	447	0	6.921	7.5	517	8	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000010609	Psen2	ENSMUST00000193897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010609	Psen2	ENSMUST00000130029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010609	Psen2	ENSMUST00000111106	ENSMUSP00000106735	TRANSLATION	protein_coding	-	CCDS15567.1	5	448	0	6.921	7.5	517	8	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000010609	Psen2	ENSMUST00000136291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010609	Psen2	ENSMUST00000149590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010609	Psen2	ENSMUST00000130711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010609	Psen2	ENSMUST00000111105	ENSMUSP00000106734	TRANSLATION	protein_coding	-	CCDS15567.1	5	448	0	6.921	7.5	517	8	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000010609	Psen2	ENSMUST00000111108	ENSMUSP00000106737	TRANSLATION	protein_coding	-	CCDS15567.1	1	448	0	6.921	7.5	517	8	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000010609	Psen2	ENSMUST00000128223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010609	Psen2	ENSMUST00000133340	ENSMUSP00000120216	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010609	Psen2	ENSMUST00000010753	ENSMUSP00000010753	TRANSLATION	protein_coding	-	CCDS15567.1	1	448	0	6.921	7.5	517	8	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000026424	Gpr37l1	ENSMUST00000027682	ENSMUSP00000027682	TRANSLATION	protein_coding	-	CCDS48371.1	1	481	0	0.52	2.7	84	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000066800	Rnasel	ENSMUST00000183241	ENSMUSP00000138752	TRANSLATION	protein_coding	stop	-	1	674	3	5.15	0	262.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066800	Rnasel	ENSMUST00000182016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066800	Rnasel	ENSMUST00000182538	ENSMUSP00000138734	TRANSLATION	protein_coding	-	-	1	227	0	4.65	0	96.7	0	-4,-5	-	-	3	MINOR
ENSMUSG00000066800	Rnasel	ENSMUST00000182131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066800	Rnasel	ENSMUST00000086209	ENSMUSP00000083385	TRANSLATION	protein_coding	-	CCDS15377.1	5	735	3	6.15	0.5	303.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066800	Rnasel	ENSMUST00000182722	ENSMUSP00000138247	TRANSLATION	protein_coding	stop	-	1	651	3	4.5	0	236	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070532	Ccdc190	ENSMUST00000094348	ENSMUSP00000091908	TRANSLATION	protein_coding	-	CCDS15466.1	1	288	0	0	1.5	424.8	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000070532	Ccdc190	ENSMUST00000175731	ENSMUSP00000135819	TRANSLATION	protein_coding	-	CCDS83630.1	1	289	0	0	1.5	423.2	0	-4,-2	-	-	5.904	ALTERNATIVE:2
ENSMUSG00000040170	Fmo2	ENSMUST00000194061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040170	Fmo2	ENSMUST00000045902	ENSMUSP00000044405	TRANSLATION	protein_coding	-	CCDS15425.1	1	535	36	4.02	6.3	973.4	1	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000040170	Fmo2	ENSMUST00000156860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040170	Fmo2	ENSMUST00000147617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040170	Fmo2	ENSMUST00000111510	ENSMUSP00000107135	TRANSLATION	protein_coding	-	CCDS15425.1	1	535	36	4.02	6.3	973.4	1	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000040170	Fmo2	ENSMUST00000143123	ENSMUSP00000114226	TRANSLATION	protein_coding	stop	-	2	161	21	1.92	0	325.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040170	Fmo2	ENSMUST00000194197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049439	Cyp20a1	ENSMUST00000060608	ENSMUSP00000050823	TRANSLATION	protein_coding	-	CCDS14990.1	1	462	0	6.07	6.3	154.9	0	1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000049439	Cyp20a1	ENSMUST00000148443	ENSMUSP00000137471	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0.24	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000049439	Cyp20a1	ENSMUST00000114202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027520	Zdbf2	ENSMUST00000239483	ENSMUSP00000159296	TRANSLATION	protein_coding	-	-	-	2498	4	0	0.5	26.8	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000027520	Zdbf2	ENSMUST00000126932	ENSMUSP00000116403	TRANSLATION	protein_coding	stop	-	3	50	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027520	Zdbf2	ENSMUST00000029025	ENSMUSP00000029025	TRANSLATION	protein_coding	-	CCDS48278.1	1	2493	1	0	0.5	0	0	-4,-7	-	-	1	MINOR
ENSMUSG00000027520	Zdbf2	ENSMUST00000114132	ENSMUSP00000109767	TRANSLATION	protein_coding	-	CCDS48278.1	5	2493	1	0	0.5	0	0	-4,-7	-	-	1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000191012	ENSMUSP00000140856	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000136898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000143606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000118263	ENSMUSP00000112476	TRANSLATION	protein_coding	-	-	1	311	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000190063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000123261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000187226	ENSMUSP00000140076	TRANSLATION	nonsense_mediated_decay	start	-	5	264	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000119714	ENSMUSP00000114091	TRANSLATION	protein_coding	-	-	1	311	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000155974	ENSMUSP00000117726	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000188449	ENSMUSP00000140725	TRANSLATION	nonsense_mediated_decay	start	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000190610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000149214	ENSMUSP00000119258	TRANSLATION	protein_coding	start/stop	-	5	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000134716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000191521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000186294	ENSMUSP00000139775	TRANSLATION	protein_coding	-	-	1	1142	0	0	0.5	32.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000056763	Cspp1	ENSMUST00000071087	ENSMUSP00000068804	TRANSLATION	protein_coding	-	CCDS35511.1	1	1197	0	0	0.5	32.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000056763	Cspp1	ENSMUST00000191360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000185422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000153804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000188249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000190625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000148663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000117415	ENSMUSP00000112800	TRANSLATION	protein_coding	-	-	1	311	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056763	Cspp1	ENSMUST00000128164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000136283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000190318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056763	Cspp1	ENSMUST00000122156	ENSMUSP00000113663	TRANSLATION	protein_coding	-	-	1	319	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026200	Glb1l	ENSMUST00000153584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000131408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000185449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000185448	ENSMUSP00000140820	TRANSLATION	protein_coding	stop	-	3	188	8	4.08	0	240.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026200	Glb1l	ENSMUST00000186148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026200	Glb1l	ENSMUST00000143193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000146713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000132507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026200	Glb1l	ENSMUST00000155716	ENSMUSP00000136285	TRANSLATION	nonsense_mediated_decay	-	-	1	646	13	12.83	1.5	403.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026200	Glb1l	ENSMUST00000186173	ENSMUSP00000139780	TRANSLATION	protein_coding	start	-	5	551	11	10.7	0	295.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026200	Glb1l	ENSMUST00000189663	ENSMUSP00000139732	TRANSLATION	nonsense_mediated_decay	start	-	5	18	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026200	Glb1l	ENSMUST00000113623	ENSMUSP00000109253	TRANSLATION	protein_coding	-	CCDS48291.1	5	646	13	12.83	1.5	403.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000091844	Gm8251	ENSMUST00000238662	ENSMUSP00000158837	TRANSLATION	protein_coding	-	-	-	6590	0	0	0	448.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091844	Gm8251	ENSMUST00000168641	ENSMUSP00000127017	TRANSLATION	protein_coding	start	-	-	1994	0	0	0	409.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026605	Cenpf	ENSMUST00000171929	ENSMUSP00000129738	TRANSLATION	protein_coding	-	CCDS35820.2	5	2997	0	0	0.5	899.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026605	Cenpf	ENSMUST00000165962	ENSMUSP00000132759	TRANSLATION	protein_coding	stop	-	1	952	0	0	0	435.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026605	Cenpf	ENSMUST00000165798	ENSMUSP00000132430	TRANSLATION	protein_coding	start/stop	-	3	119	0	0	0	51	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026605	Cenpf	ENSMUST00000194165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026605	Cenpf	ENSMUST00000194624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026605	Cenpf	ENSMUST00000165663	ENSMUSP00000130308	TRANSLATION	nonsense_mediated_decay	-	-	3	88	0	0	0	114.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026377	Nifk	ENSMUST00000027626	ENSMUSP00000027626	TRANSLATION	protein_coding	-	CCDS15222.1	1	317	0	3.458	0.5	137.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026377	Nifk	ENSMUST00000161495	ENSMUSP00000125006	TRANSLATION	protein_coding	stop	-	5	101	0	2.262	0	58.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026377	Nifk	ENSMUST00000112688	ENSMUSP00000108308	TRANSLATION	protein_coding	-	-	5	269	0	2.658	0	108.4	0	-4,-5	-	-	8.634	MINOR
ENSMUSG00000037924	Olfr16	ENSMUST00000215254	ENSMUSP00000149249	TRANSLATION	protein_coding	-	CCDS15521.1	5	309	0	0.36	8.8	171.6	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037924	Olfr16	ENSMUST00000038432	ENSMUSP00000041524	TRANSLATION	protein_coding	-	CCDS15521.1	-	309	0	0.36	8.8	171.6	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079434	Neu2	ENSMUST00000172222	ENSMUSP00000131409	TRANSLATION	protein_coding	-	CCDS48308.1	1	393	3	3.33	0.5	138.5	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000079434	Neu2	ENSMUST00000070898	ENSMUSP00000065439	TRANSLATION	protein_coding	-	CCDS15135.1	1	379	3	3.33	1.5	138.5	0	-4,-2	-	-	15	PRINCIPAL:3
ENSMUSG00000079434	Neu2	ENSMUST00000166055	ENSMUSP00000132099	TRANSLATION	protein_coding	stop	-	3	111	1	2.33	0	38.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079434	Neu2	ENSMUST00000163606	ENSMUSP00000127777	TRANSLATION	protein_coding	stop	-	1	90	1	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079434	Neu2	ENSMUST00000165109	ENSMUSP00000126509	TRANSLATION	protein_coding	-	CCDS15135.1	1	379	3	3.33	1.5	138.5	0	-4,-2	-	-	15	PRINCIPAL:3
ENSMUSG00000079434	Neu2	ENSMUST00000166259	ENSMUSP00000132513	TRANSLATION	protein_coding	-	CCDS15135.1	1	379	3	3.33	1.5	138.5	0	-4,-2	-	-	15	PRINCIPAL:3
ENSMUSG00000079434	Neu2	ENSMUST00000164128	ENSMUSP00000127913	TRANSLATION	protein_coding	-	CCDS48309.1	1	385	3	3.33	0.5	138.5	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000047369	Dnah14	ENSMUST00000160793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047369	Dnah14	ENSMUST00000193365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047369	Dnah14	ENSMUST00000160345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047369	Dnah14	ENSMUST00000097446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047369	Dnah14	ENSMUST00000238412	ENSMUSP00000158787	TRANSLATION	protein_coding	-	-	-	4596	48	28.845	0	1892.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047369	Dnah14	ENSMUST00000192602	ENSMUSP00000146744	TRANSLATION	protein_coding	start	-	3	133	0	0.36	0	100.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047369	Dnah14	ENSMUST00000208001	ENSMUSP00000146843	TRANSLATION	protein_coding	-	-	5	4489	42	28.525	0	1849.1	0	-4,-5	-	-	10.734	MINOR
ENSMUSG00000047369	Dnah14	ENSMUST00000194470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047369	Dnah14	ENSMUST00000195458	ENSMUSP00000146735	TRANSLATION	protein_coding	start	-	3	32	0	0.18	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047369	Dnah14	ENSMUST00000195808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000152967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000124973	ENSMUSP00000117616	TRANSLATION	protein_coding	-	CCDS35734.2	1	2431	0	0	0.5	113.9	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000006005	Tpr	ENSMUST00000151563	ENSMUSP00000116012	TRANSLATION	protein_coding	start	-	1	611	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006005	Tpr	ENSMUST00000132257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000147769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000141827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000124484	ENSMUSP00000121991	TRANSLATION	protein_coding	start	-	3	144	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006005	Tpr	ENSMUST00000131701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000119161	ENSMUSP00000112606	TRANSLATION	protein_coding	-	-	5	2357	0	0	0	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000006005	Tpr	ENSMUST00000150752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000138718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000130779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006005	Tpr	ENSMUST00000128417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006005	Tpr	ENSMUST00000132522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026429	Ube2t	ENSMUST00000027687	ENSMUSP00000027687	TRANSLATION	protein_coding	-	CCDS15313.1	1	204	0	5.33	1.5	139.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026429	Ube2t	ENSMUST00000223886	ENSMUSP00000152910	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026429	Ube2t	ENSMUST00000139617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026429	Ube2t	ENSMUST00000188177	ENSMUSP00000139929	TRANSLATION	protein_coding	start	-	5	74	0	1.75	0	28.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026429	Ube2t	ENSMUST00000185369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026586	Prrx1	ENSMUST00000174397	ENSMUSP00000134338	TRANSLATION	protein_coding	-	CCDS56651.1	1	200	0	1.4	0.5	80.4	0	-4,-5	-	-	10.218	MINOR
ENSMUSG00000026586	Prrx1	ENSMUST00000183691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026586	Prrx1	ENSMUST00000027878	ENSMUSP00000027878	TRANSLATION	protein_coding	-	CCDS15427.1	1	245	0	1.4	13	110.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026586	Prrx1	ENSMUST00000075805	ENSMUSP00000075203	TRANSLATION	protein_coding	-	CCDS15428.1	1	217	0	1.4	10.8	80.4	0	-4,-5	-	-	13.486	MINOR
ENSMUSG00000026586	Prrx1	ENSMUST00000174098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026063	Pih1d3	ENSMUST00000027230	ENSMUSP00000127665	TRANSLATION	protein_coding	-	CCDS35531.1	-	218	0	0	1.5	24.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006299	Aamp	ENSMUST00000006462	ENSMUSP00000006462	TRANSLATION	protein_coding	-	CCDS15043.1	1	435	0	8.4	7.5	104.1	0	-4,-5	-	-	14.94	PRINCIPAL:3
ENSMUSG00000006299	Aamp	ENSMUST00000186833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006299	Aamp	ENSMUST00000191258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006299	Aamp	ENSMUST00000178235	ENSMUSP00000136644	TRANSLATION	protein_coding	-	CCDS56631.1	5	436	0	8.43	7.5	104.1	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000006299	Aamp	ENSMUST00000187046	ENSMUSP00000139411	TRANSLATION	protein_coding	start/stop	-	5	174	0	3.83	0	37.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006299	Aamp	ENSMUST00000190008	ENSMUSP00000140427	TRANSLATION	protein_coding	stop	-	5	92	0	0.87	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039372	Marchf4	ENSMUST00000047786	ENSMUSP00000042803	TRANSLATION	protein_coding	-	CCDS15034.1	1	409	4	0.8	2.9	37.9	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000101315	Krtap28-13	ENSMUST00000188005	ENSMUSP00000140288	TRANSLATION	protein_coding	-	CCDS78637.1	-	138	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000055567	Unc80	ENSMUST00000061620	ENSMUSP00000053692	TRANSLATION	protein_coding	-	CCDS48283.1	1	3326	0	0	4.1	304.1	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000055567	Unc80	ENSMUST00000187179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055567	Unc80	ENSMUST00000114008	ENSMUSP00000109641	TRANSLATION	nonsense_mediated_decay	-	-	2	298	0	0	0	304.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055567	Unc80	ENSMUST00000212557	ENSMUSP00000148517	TRANSLATION	protein_coding	-	-	5	3258	0	0	1.7	304.1	0	-4,-5	-	-	6.226	ALTERNATIVE:2
ENSMUSG00000055567	Unc80	ENSMUST00000136727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055567	Unc80	ENSMUST00000152844	ENSMUSP00000117070	TRANSLATION	protein_coding	start	-	1	281	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113267	Gm47969	ENSMUST00000222567	ENSMUSP00000152431	TRANSLATION	protein_coding	-	-	-	109	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000005677	Nr1i3	ENSMUST00000152865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005677	Nr1i3	ENSMUST00000111328	ENSMUSP00000106960	TRANSLATION	protein_coding	-	CCDS56655.1	1	357	8	8.66	1.5	156.6	0	-4,-5	-	-	17.91	ALTERNATIVE:2
ENSMUSG00000005677	Nr1i3	ENSMUST00000133075	ENSMUSP00000137852	TRANSLATION	nonsense_mediated_decay	-	-	1	95	4	1	0	48.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005677	Nr1i3	ENSMUST00000155126	ENSMUSP00000137683	TRANSLATION	protein_coding	-	-	2	221	0	5.66	0.5	61.8	0	-4,-7	-	-	0.222	MINOR
ENSMUSG00000005677	Nr1i3	ENSMUST00000137298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005677	Nr1i3	ENSMUST00000005820	ENSMUSP00000005820	TRANSLATION	protein_coding	-	CCDS15480.1	1	358	8	8.66	1.5	158.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000005677	Nr1i3	ENSMUST00000075469	ENSMUSP00000074915	TRANSLATION	protein_coding	-	CCDS56654.1	1	286	8	6.33	0.5	127.8	0	-4,-5	-	-	11.52	MINOR
ENSMUSG00000005677	Nr1i3	ENSMUST00000149404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013997	Nit1	ENSMUST00000111296	ENSMUSP00000106927	TRANSLATION	protein_coding	-	-	5	239	11	3.745	0	163.7	0	-4,0	-	-	10.35	MINOR
ENSMUSG00000013997	Nit1	ENSMUST00000111289	ENSMUSP00000106920	TRANSLATION	protein_coding	-	CCDS56656.1	1	290	12	4.745	5.3	246.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000013997	Nit1	ENSMUST00000156856	ENSMUSP00000116835	TRANSLATION	protein_coding	stop	-	3	132	4	1.995	0	90	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013997	Nit1	ENSMUST00000136339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013997	Nit1	ENSMUST00000148339	ENSMUSP00000119171	TRANSLATION	protein_coding	stop	-	3	87	2	0.97	0	49.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013997	Nit1	ENSMUST00000141357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013997	Nit1	ENSMUST00000146428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013997	Nit1	ENSMUST00000111295	ENSMUSP00000106926	TRANSLATION	protein_coding	-	CCDS35775.1	1	323	12	4.745	0.5	246.8	0	-4,0	-	-	18	MINOR
ENSMUSG00000047361	Gm973	ENSMUST00000187979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047361	Gm973	ENSMUST00000191051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047361	Gm973	ENSMUST00000185753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047361	Gm973	ENSMUST00000114243	ENSMUSP00000109881	TRANSLATION	protein_coding	-	CCDS35585.1	1	1059	0	0	0.5	521.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047361	Gm973	ENSMUST00000185291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047361	Gm973	ENSMUST00000212835	ENSMUSP00000148463	TRANSLATION	protein_coding	start/stop	-	5	97	0	0	0	130.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047361	Gm973	ENSMUST00000186310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047361	Gm973	ENSMUST00000190490	ENSMUSP00000140781	TRANSLATION	protein_coding	start	-	5	246	0	0	0	257.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047361	Gm973	ENSMUST00000186434	ENSMUSP00000141102	TRANSLATION	protein_coding	stop	-	5	355	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047361	Gm973	ENSMUST00000187454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026000	Lancl1	ENSMUST00000149996	ENSMUSP00000122752	TRANSLATION	protein_coding	stop	-	3	173	1	3.75	0	91.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026000	Lancl1	ENSMUST00000133508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026000	Lancl1	ENSMUST00000113979	ENSMUSP00000109612	TRANSLATION	protein_coding	-	CCDS15025.1	1	399	11	8.58	14.8	347.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026000	Lancl1	ENSMUST00000027149	ENSMUSP00000027149	TRANSLATION	protein_coding	-	CCDS15025.1	1	399	11	8.58	14.8	347.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026000	Lancl1	ENSMUST00000119559	ENSMUSP00000113080	TRANSLATION	protein_coding	-	CCDS15025.1	1	399	11	8.58	14.8	347.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026000	Lancl1	ENSMUST00000189210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016494	Cd34	ENSMUST00000194036	ENSMUSP00000141884	TRANSLATION	nonsense_mediated_decay	start	-	5	104	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000016494	Cd34	ENSMUST00000016638	ENSMUSP00000016638	TRANSLATION	protein_coding	-	CCDS15640.1	1	382	0	0	1.5	252.1	1	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000016494	Cd34	ENSMUST00000195092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016494	Cd34	ENSMUST00000110815	ENSMUSP00000106439	TRANSLATION	protein_coding	-	CCDS48490.1	1	325	0	0	1.5	167.6	1	2,-2	-	-	0.93	MINOR
ENSMUSG00000016494	Cd34	ENSMUST00000194458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033227	Wnt6	ENSMUST00000189544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033227	Wnt6	ENSMUST00000006716	ENSMUSP00000006716	TRANSLATION	protein_coding	-	CCDS15056.1	1	364	0	1.58	5.1	385.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000046101	Mcmdc2	ENSMUST00000183059	ENSMUSP00000138182	TRANSLATION	nonsense_mediated_decay	start	-	2	25	0	0.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046101	Mcmdc2	ENSMUST00000052843	ENSMUSP00000054715	TRANSLATION	protein_coding	-	-	1	347	4	0	0	0	0	-4,-5	-	-	4	MINOR
ENSMUSG00000046101	Mcmdc2	ENSMUST00000171802	ENSMUSP00000128620	TRANSLATION	protein_coding	-	CCDS48215.1	5	681	4	2.37	5.1	30.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046101	Mcmdc2	ENSMUST00000125294	ENSMUSP00000120858	TRANSLATION	protein_coding	-	-	5	604	4	1.37	0	0	0	-4,-5	-	-	7.468	MINOR
ENSMUSG00000046101	Mcmdc2	ENSMUST00000118098	ENSMUSP00000112851	TRANSLATION	protein_coding	-	-	5	358	4	0	0.5	0	0	-4,-5	-	-	4	MINOR
ENSMUSG00000046101	Mcmdc2	ENSMUST00000140948	ENSMUSP00000120577	TRANSLATION	protein_coding	-	-	5	692	4	2.37	0	30.6	0	-4,-5	-	-	16	MINOR
ENSMUSG00000026249	Serpine2	ENSMUST00000190724	ENSMUSP00000140255	TRANSLATION	protein_coding	stop	-	5	232	0	3.5	0	182.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000026249	Serpine2	ENSMUST00000153862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026249	Serpine2	ENSMUST00000191529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026249	Serpine2	ENSMUST00000027467	ENSMUSP00000027467	TRANSLATION	protein_coding	-	CCDS15092.1	1	397	0	7.66	9.5	360.5	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026249	Serpine2	ENSMUST00000189793	ENSMUSP00000140065	TRANSLATION	protein_coding	start/stop	-	5	232	0	5	0	218.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026249	Serpine2	ENSMUST00000191026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090550	Prlh	ENSMUST00000166281	ENSMUSP00000130768	TRANSLATION	protein_coding	-	CCDS48318.1	1	86	0	0	0.5	92.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048960	Prex2	ENSMUST00000189822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048960	Prex2	ENSMUST00000188189	ENSMUSP00000140621	TRANSLATION	nonsense_mediated_decay	start	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048960	Prex2	ENSMUST00000190935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048960	Prex2	ENSMUST00000187745	ENSMUSP00000140788	TRANSLATION	nonsense_mediated_decay	start	-	5	50	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048960	Prex2	ENSMUST00000187694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048960	Prex2	ENSMUST00000027056	ENSMUSP00000027056	TRANSLATION	protein_coding	-	CCDS48217.1	1	1598	0	13.86	1.5	314.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048960	Prex2	ENSMUST00000189385	ENSMUSP00000140863	TRANSLATION	nonsense_mediated_decay	start	-	1	24	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000048960	Prex2	ENSMUST00000188154	ENSMUSP00000140580	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073633	Fbxo36	ENSMUST00000143656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073633	Fbxo36	ENSMUST00000139562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073633	Fbxo36	ENSMUST00000151737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073633	Fbxo36	ENSMUST00000097672	ENSMUSP00000095276	TRANSLATION	protein_coding	-	CCDS35634.1	1	188	0	0	3.9	31.8	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000001305	Rrp15	ENSMUST00000162336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001305	Rrp15	ENSMUST00000001339	ENSMUSP00000001339	TRANSLATION	protein_coding	-	CCDS15602.1	1	281	0	0	1.5	109.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000817	Fasl	ENSMUST00000193648	ENSMUSP00000141422	TRANSLATION	protein_coding	-	-	1	69	0	1	0	55.8	0	-4,-5	-	-	4.374	MINOR
ENSMUSG00000000817	Fasl	ENSMUST00000000834	ENSMUSP00000000834	TRANSLATION	protein_coding	-	CCDS15418.1	1	279	0	2.6	6.3	121.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026240	Cops7b	ENSMUST00000138280	ENSMUSP00000115056	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	1.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026240	Cops7b	ENSMUST00000122884	ENSMUSP00000119807	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026240	Cops7b	ENSMUST00000149542	ENSMUSP00000122317	TRANSLATION	protein_coding	stop	-	3	199	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026240	Cops7b	ENSMUST00000121534	ENSMUSP00000113587	TRANSLATION	protein_coding	-	CCDS15122.1	5	264	0	6.08	15.8	32.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000026240	Cops7b	ENSMUST00000127219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026240	Cops7b	ENSMUST00000027446	ENSMUSP00000027446	TRANSLATION	protein_coding	-	CCDS15122.1	1	264	0	6.08	15.8	32.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000066797	Zfp648	ENSMUST00000086195	ENSMUSP00000083370	TRANSLATION	protein_coding	-	CCDS56646.1	3	525	40	0.4	0.5	187.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046828	Mettl21e	ENSMUST00000054801	ENSMUSP00000056481	TRANSLATION	protein_coding	-	CCDS14931.1	1	244	14	2.8	0.5	114.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046828	Mettl21e	ENSMUST00000150062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026531	Mptx1	ENSMUST00000027816	ENSMUSP00000027816	TRANSLATION	protein_coding	-	CCDS15541.1	1	219	9	1	0.5	243.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032487	Ptgs2	ENSMUST00000035065	ENSMUSP00000035065	TRANSLATION	protein_coding	-	CCDS15353.1	1	604	22	9.83	2.7	182.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032487	Ptgs2	ENSMUST00000190784	ENSMUSP00000139904	TRANSLATION	protein_coding	stop	-	3	62	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026289	Atg16l1	ENSMUST00000134603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000113186	ENSMUSP00000108811	TRANSLATION	protein_coding	-	CCDS56638.1	1	588	0	9.25	14.8	244	0	-4,-1	-	-	15.202	ALTERNATIVE:1
ENSMUSG00000026289	Atg16l1	ENSMUST00000127884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000137638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000113190	ENSMUSP00000108815	TRANSLATION	protein_coding	-	CCDS56637.1	1	623	0	9.65	14.8	244	0	-4,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000026289	Atg16l1	ENSMUST00000027512	ENSMUSP00000027512	TRANSLATION	protein_coding	-	CCDS15136.1	1	607	0	9.25	14.8	244	0	-4,-1	-	-	15.202	PRINCIPAL:3
ENSMUSG00000026289	Atg16l1	ENSMUST00000151037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000144047	ENSMUSP00000120955	TRANSLATION	protein_coding	stop	-	5	154	0	0.33	0	132.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026289	Atg16l1	ENSMUST00000129431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000133072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026289	Atg16l1	ENSMUST00000139628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044768	D1Ertd622e	ENSMUST00000142234	ENSMUSP00000137803	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	235.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044768	D1Ertd622e	ENSMUST00000053033	ENSMUSP00000051034	TRANSLATION	protein_coding	-	CCDS15202.1	1	207	0	0	13.8	373.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000044768	D1Ertd622e	ENSMUST00000149927	ENSMUSP00000121997	TRANSLATION	protein_coding	-	CCDS15202.1	1	207	0	0	13.8	373.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000044768	D1Ertd622e	ENSMUST00000153115	ENSMUSP00000138031	TRANSLATION	protein_coding	-	CCDS15202.1	1	207	0	0	13.8	373.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026435	Slc45a3	ENSMUST00000027695	ENSMUSP00000027695	TRANSLATION	protein_coding	-	CCDS15278.1	1	553	0	0	2.7	42.1	11	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000026435	Slc45a3	ENSMUST00000177943	ENSMUSP00000136190	TRANSLATION	protein_coding	-	CCDS15278.1	1	553	0	0	2.7	42.1	11	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000026435	Slc45a3	ENSMUST00000190322	ENSMUSP00000140767	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	33.8	6	3,-1	-	-	-1	MINOR
ENSMUSG00000026435	Slc45a3	ENSMUST00000185387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050134	Olfr430	ENSMUST00000214390	ENSMUSP00000150930	TRANSLATION	protein_coding	-	CCDS48454.1	5	317	0	0.36	7.5	218.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000050134	Olfr430	ENSMUST00000213425	ENSMUSP00000150451	TRANSLATION	protein_coding	-	CCDS48454.1	5	317	0	0.36	7.5	218.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000050134	Olfr430	ENSMUST00000055873	ENSMUSP00000130615	TRANSLATION	protein_coding	-	CCDS48454.1	-	317	0	0.36	7.5	218.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000026162	Nhej1	ENSMUST00000152855	ENSMUSP00000116797	TRANSLATION	protein_coding	start	-	1	165	0	2.5	0	29.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000026162	Nhej1	ENSMUST00000188033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046337	Fam178b	ENSMUST00000193548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046337	Fam178b	ENSMUST00000193763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046337	Fam178b	ENSMUST00000194839	ENSMUSP00000141644	TRANSLATION	nonsense_mediated_decay	start	-	5	140	0	0	0	101.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046337	Fam178b	ENSMUST00000170295	ENSMUSP00000132846	TRANSLATION	protein_coding	-	CCDS48241.1	5	523	0	0	0.5	423.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046337	Fam178b	ENSMUST00000193155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046337	Fam178b	ENSMUST00000195729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046337	Fam178b	ENSMUST00000114981	ENSMUSP00000124023	TRANSLATION	protein_coding	-	CCDS14885.2	1	379	0	0	0.5	388.8	0	-4,-5	-	-	3.894	MINOR
ENSMUSG00000046337	Fam178b	ENSMUST00000194025	ENSMUSP00000141520	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	0	0	91.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000026439	Rbbp5	ENSMUST00000188575	ENSMUSP00000140344	TRANSLATION	protein_coding	stop	-	1	107	0	2.156	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026439	Rbbp5	ENSMUST00000027700	ENSMUSP00000027700	TRANSLATION	protein_coding	-	-	1	373	0	2.95	0	0	0	-4,-7	-	-	0.69	MINOR
ENSMUSG00000026439	Rbbp5	ENSMUST00000189786	ENSMUSP00000140790	TRANSLATION	protein_coding	stop	-	3	149	0	2.944	0	23.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026439	Rbbp5	ENSMUST00000187834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026439	Rbbp5	ENSMUST00000190997	ENSMUSP00000141003	TRANSLATION	protein_coding	-	CCDS15286.1	1	538	0	5.606	15	23.8	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000026439	Rbbp5	ENSMUST00000187505	ENSMUSP00000141176	TRANSLATION	protein_coding	-	-	5	410	0	2.95	3.6	0	0	-4,-7	-	-	1.434	MINOR
ENSMUSG00000026439	Rbbp5	ENSMUST00000190825	ENSMUSP00000139519	TRANSLATION	protein_coding	-	-	1	537	0	5.606	15	23.8	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000191441	ENSMUSP00000139750	TRANSLATION	protein_coding	-	CCDS14949.1	3	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000190831	ENSMUSP00000140160	TRANSLATION	protein_coding	-	CCDS14949.1	2	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000050567	ENSMUSP00000055413	TRANSLATION	protein_coding	-	CCDS14949.1	1	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000114493	ENSMUSP00000110137	TRANSLATION	protein_coding	-	CCDS14949.1	1	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000186266	ENSMUSP00000140273	TRANSLATION	protein_coding	-	CCDS14949.1	3	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000114492	ENSMUSP00000110136	TRANSLATION	protein_coding	-	CCDS14949.1	3	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043629	1700019D03Rik	ENSMUST00000190726	ENSMUSP00000140530	TRANSLATION	protein_coding	-	CCDS14949.1	5	106	0	0	1.5	127	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006301	Tmbim1	ENSMUST00000128505	ENSMUSP00000122874	TRANSLATION	protein_coding	start	-	3	156	0	0	0	44.5	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000006301	Tmbim1	ENSMUST00000130763	ENSMUSP00000121814	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006301	Tmbim1	ENSMUST00000135384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006301	Tmbim1	ENSMUST00000141560	ENSMUSP00000115444	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006301	Tmbim1	ENSMUST00000154859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006301	Tmbim1	ENSMUST00000152603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006301	Tmbim1	ENSMUST00000113796	ENSMUSP00000109427	TRANSLATION	protein_coding	-	CCDS15044.1	1	309	0	0	3.9	111	7	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000006301	Tmbim1	ENSMUST00000016309	ENSMUSP00000016309	TRANSLATION	protein_coding	-	CCDS15044.1	1	309	0	0	3.9	111	7	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000118640	AC167036.2	ENSMUST00000239185	ENSMUSP00000159251	TRANSLATION	protein_coding	-	-	-	296	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000047793	Sned1	ENSMUST00000062202	ENSMUSP00000050832	TRANSLATION	protein_coding	-	CCDS35670.1	1	1403	36	13.46	0.5	629	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047793	Sned1	ENSMUST00000165883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047793	Sned1	ENSMUST00000168122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047793	Sned1	ENSMUST00000163688	ENSMUSP00000132455	TRANSLATION	protein_coding	start/stop	-	5	573	22	4.88	0	220.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047793	Sned1	ENSMUST00000172289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047793	Sned1	ENSMUST00000165843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025977	Boll	ENSMUST00000159564	ENSMUSP00000124962	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	1.798	0	40	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025977	Boll	ENSMUST00000087585	ENSMUSP00000084868	TRANSLATION	protein_coding	-	CCDS48262.1	1	293	0	2.898	4	72.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000025977	Boll	ENSMUST00000174065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025977	Boll	ENSMUST00000161810	ENSMUSP00000138084	TRANSLATION	nonsense_mediated_decay	start	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025977	Boll	ENSMUST00000114423	ENSMUSP00000110066	TRANSLATION	protein_coding	-	CCDS48261.1	1	160	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025977	Boll	ENSMUST00000159398	ENSMUSP00000123814	TRANSLATION	protein_coding	-	-	1	132	0	2.898	0	72.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025977	Boll	ENSMUST00000173983	ENSMUSP00000134054	TRANSLATION	protein_coding	start	-	5	282	0	2.7	2.4	72.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051185	Fam174a	ENSMUST00000059975	ENSMUSP00000057670	TRANSLATION	protein_coding	-	CCDS35674.1	1	190	0	0	1.5	222.5	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051185	Fam174a	ENSMUST00000186780	ENSMUSP00000139943	TRANSLATION	protein_coding	-	-	1	190	0	0	1.5	222.5	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025934	Gsta3	ENSMUST00000027067	ENSMUSP00000027067	TRANSLATION	protein_coding	-	CCDS14847.1	1	221	11	5.25	4.7	141.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000025934	Gsta3	ENSMUST00000190711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025934	Gsta3	ENSMUST00000121676	ENSMUSP00000113262	TRANSLATION	protein_coding	-	CCDS14847.1	5	221	11	5.25	4.7	141.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000025934	Gsta3	ENSMUST00000124990	ENSMUSP00000140210	TRANSLATION	protein_coding	stop	-	5	133	5	3	0	98.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026192	Atic	ENSMUST00000154855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026192	Atic	ENSMUST00000148077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026192	Atic	ENSMUST00000027384	ENSMUSP00000027384	TRANSLATION	protein_coding	-	CCDS15030.1	1	592	24	14.58	19.5	402.2	0	-2,-3	-	-	22	PRINCIPAL:1
ENSMUSG00000026192	Atic	ENSMUST00000155769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026192	Atic	ENSMUST00000136443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026192	Atic	ENSMUST00000187982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022591	Gm9747	ENSMUST00000023262	ENSMUSP00000023262	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000026575	Nme7	ENSMUST00000086028	ENSMUSP00000083192	TRANSLATION	protein_coding	-	CCDS78731.1	5	277	13	2.54	0.5	163.1	0	-4,-2	-	-	6	MINOR
ENSMUSG00000026575	Nme7	ENSMUST00000195474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026575	Nme7	ENSMUST00000193591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026575	Nme7	ENSMUST00000192225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026575	Nme7	ENSMUST00000191947	ENSMUSP00000141431	TRANSLATION	protein_coding	-	CCDS15436.2	1	395	22	2.54	1.5	268.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026575	Nme7	ENSMUST00000193237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026575	Nme7	ENSMUST00000193683	ENSMUSP00000141963	TRANSLATION	protein_coding	-	CCDS15436.2	1	395	22	2.54	1.5	268.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026575	Nme7	ENSMUST00000192710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026575	Nme7	ENSMUST00000194694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026575	Nme7	ENSMUST00000193808	ENSMUSP00000141771	TRANSLATION	nonsense_mediated_decay	-	-	1	395	22	2.54	1.5	268.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000193436	ENSMUSP00000142147	TRANSLATION	protein_coding	start	-	5	62	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000195737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026616	Cr2	ENSMUST00000195120	ENSMUSP00000141538	TRANSLATION	protein_coding	-	-	5	1026	0	14.2	0	473.9	0	0,-3	-	-	0	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000193356	ENSMUSP00000141706	TRANSLATION	nonsense_mediated_decay	start	-	1	735	0	9.466	0	320.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000082321	ENSMUSP00000080938	TRANSLATION	protein_coding	-	CCDS15642.1	1	1032	0	14.416	0.5	473.9	1	0,-3	-	-	0	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000195347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026616	Cr2	ENSMUST00000043104	ENSMUSP00000044261	TRANSLATION	protein_coding	start	-	5	347	0	5.75	0	186	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026616	Cr2	ENSMUST00000195722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026616	Cr2	ENSMUST00000238929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026616	Cr2	ENSMUST00000210219	ENSMUSP00000147804	TRANSLATION	protein_coding	-	-	5	1408	0	20.916	0.5	687.4	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026616	Cr2	ENSMUST00000194149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026616	Cr2	ENSMUST00000192604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026616	Cr2	ENSMUST00000193801	ENSMUSP00000141276	TRANSLATION	protein_coding	-	-	1	50	0	0.45	0	0	0	2,-3	-	-	0	MINOR
ENSMUSG00000043429	Ccdc185	ENSMUST00000060041	ENSMUSP00000095053	TRANSLATION	protein_coding	-	CCDS15589.1	-	621	0	0	0.5	390	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044783	Hjurp	ENSMUST00000065420	ENSMUSP00000070419	TRANSLATION	protein_coding	-	-	1	591	0	2.25	0.5	347.1	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000044783	Hjurp	ENSMUST00000126739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044783	Hjurp	ENSMUST00000054674	ENSMUSP00000054263	TRANSLATION	protein_coding	-	CCDS15144.1	1	667	0	2.25	0.5	347.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000044783	Hjurp	ENSMUST00000128532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044783	Hjurp	ENSMUST00000147393	ENSMUSP00000120753	TRANSLATION	protein_coding	-	-	1	89	0	2.25	0	33.9	0	-4,-2	-	-	6	MINOR
ENSMUSG00000044783	Hjurp	ENSMUST00000127446	ENSMUSP00000118659	TRANSLATION	protein_coding	start	-	1	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044783	Hjurp	ENSMUST00000148384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041303	Gtf3c3	ENSMUST00000189906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041303	Gtf3c3	ENSMUST00000190419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041303	Gtf3c3	ENSMUST00000041638	ENSMUSP00000039420	TRANSLATION	protein_coding	-	CCDS14958.1	1	882	0	2.1	7.5	41.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037849	Ifi206	ENSMUST00000169797	ENSMUSP00000133809	TRANSLATION	protein_coding	stop	-	5	143	0	2	0	208.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037849	Ifi206	ENSMUST00000160565	ENSMUSP00000134646	TRANSLATION	protein_coding	-	-	5	921	0	4.7	0.5	288.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026641	Usf1	ENSMUST00000159466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026641	Usf1	ENSMUST00000167546	ENSMUSP00000128913	TRANSLATION	protein_coding	-	CCDS15495.1	5	310	0	2.2	8.8	64.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026641	Usf1	ENSMUST00000159929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026641	Usf1	ENSMUST00000160335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026641	Usf1	ENSMUST00000161297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026641	Usf1	ENSMUST00000159371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026641	Usf1	ENSMUST00000159207	ENSMUSP00000124000	TRANSLATION	protein_coding	stop	-	2	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026641	Usf1	ENSMUST00000160486	ENSMUSP00000125363	TRANSLATION	protein_coding	-	-	2	296	0	2.05	0	64.3	0	-4,-5	-	-	11.592	MINOR
ENSMUSG00000026641	Usf1	ENSMUST00000161241	ENSMUSP00000125729	TRANSLATION	protein_coding	-	CCDS15495.1	1	310	0	2.2	8.8	64.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026641	Usf1	ENSMUST00000001284	ENSMUSP00000001284	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041809	Efhc1	ENSMUST00000038447	ENSMUSP00000042343	TRANSLATION	protein_coding	-	CCDS48227.1	1	648	4	2.52	0.5	331.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000041809	Efhc1	ENSMUST00000160782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079610	Ankrd39	ENSMUST00000208269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079610	Ankrd39	ENSMUST00000207843	ENSMUSP00000147091	TRANSLATION	nonsense_mediated_decay	-	-	1	98	4	0.12	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079610	Ankrd39	ENSMUST00000001172	ENSMUSP00000001172	TRANSLATION	protein_coding	-	CCDS14883.1	1	183	0	3.31	8.8	83.9	0	-4,-5	-	-	13.572	PRINCIPAL:1
ENSMUSG00000079610	Ankrd39	ENSMUST00000207922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079610	Ankrd39	ENSMUST00000194894	ENSMUSP00000141712	TRANSLATION	protein_coding	-	CCDS78565.1	1	167	0	2.74	1.5	107.7	0	-4,-5	-	-	11.052	MINOR
ENSMUSG00000079610	Ankrd39	ENSMUST00000208690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038463	Olfml2b	ENSMUST00000046792	ENSMUSP00000047291	TRANSLATION	protein_coding	-	CCDS15473.1	1	746	0	1.4	1.5	281.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000025929	Il17a	ENSMUST00000027061	ENSMUSP00000027061	TRANSLATION	protein_coding	-	CCDS14842.1	1	158	0	2	1.5	94.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039210	Gpatch2	ENSMUST00000160471	ENSMUSP00000124407	TRANSLATION	protein_coding	-	-	1	504	0	0	0.5	61.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000039210	Gpatch2	ENSMUST00000110943	ENSMUSP00000106568	TRANSLATION	protein_coding	-	-	1	490	0	0	2.9	61.9	0	-4,-6	-	-	6.716	ALTERNATIVE:2
ENSMUSG00000039210	Gpatch2	ENSMUST00000044812	ENSMUSP00000048979	TRANSLATION	protein_coding	-	-	1	375	0	0	6.3	0	0	-4,-6	-	-	2	MINOR
ENSMUSG00000039210	Gpatch2	ENSMUST00000160570	ENSMUSP00000125750	TRANSLATION	protein_coding	-	-	1	196	0	0	0	61.9	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000039210	Gpatch2	ENSMUST00000159748	ENSMUSP00000137858	TRANSLATION	nonsense_mediated_decay	-	-	5	300	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039210	Gpatch2	ENSMUST00000065573	ENSMUSP00000065009	TRANSLATION	protein_coding	-	CCDS15605.1	1	527	0	0	2.9	61.9	0	-4,-6	-	-	6.716	PRINCIPAL:2
ENSMUSG00000039210	Gpatch2	ENSMUST00000161260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039210	Gpatch2	ENSMUST00000097443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039210	Gpatch2	ENSMUST00000160481	ENSMUSP00000137801	TRANSLATION	nonsense_mediated_decay	-	-	1	389	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026355	Mcm6	ENSMUST00000191454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026355	Mcm6	ENSMUST00000190495	ENSMUSP00000140308	TRANSLATION	protein_coding	-	CCDS83586.1	1	794	3	12.66	0.5	631.3	0	-4,-5	-	-	13.002	MINOR
ENSMUSG00000026355	Mcm6	ENSMUST00000027601	ENSMUSP00000027601	TRANSLATION	protein_coding	-	CCDS15252.1	1	821	3	13.66	7.5	631.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026355	Mcm6	ENSMUST00000188755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000085079	Khdc1b	ENSMUST00000147615	ENSMUSP00000120275	TRANSLATION	protein_coding	-	CCDS48229.1	1	126	0	0	0.5	84	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045259	Klhdc9	ENSMUST00000061878	ENSMUSP00000056212	TRANSLATION	protein_coding	-	CCDS35776.1	1	350	0	0	2.7	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000113097	Gm47959	ENSMUST00000223439	ENSMUSP00000152237	TRANSLATION	protein_coding	-	-	-	166	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000097993	Ptprv	ENSMUST00000182387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097993	Ptprv	ENSMUST00000183212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097993	Ptprv	ENSMUST00000086432	ENSMUSP00000159183	TRANSLATION	protein_coding	start/stop	-	5	97	6	1.8	0	83.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000097993	Ptprv	ENSMUST00000182012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097993	Ptprv	ENSMUST00000182541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097993	Ptprv	ENSMUST00000183317	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000097993	Ptprv	ENSMUST00000182120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097993	Ptprv	ENSMUST00000183089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097993	Ptprv	ENSMUST00000183328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097993	Ptprv	ENSMUST00000182718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097993	Ptprv	ENSMUST00000182570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038806	Sde2	ENSMUST00000038091	ENSMUSP00000037890	TRANSLATION	protein_coding	-	CCDS15574.1	1	448	0	0	1.5	97.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038806	Sde2	ENSMUST00000194948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026029	Casp8	ENSMUST00000027189	ENSMUSP00000027189	TRANSLATION	protein_coding	-	CCDS14979.1	1	480	4	6.85	0.5	334.1	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000026029	Casp8	ENSMUST00000191201	ENSMUSP00000140546	TRANSLATION	protein_coding	-	CCDS78590.1	5	500	4	6.85	0.5	334.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000026029	Casp8	ENSMUST00000190213	ENSMUSP00000140335	TRANSLATION	protein_coding	-	CCDS78590.1	5	500	4	6.85	0.5	334.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000026029	Casp8	ENSMUST00000165549	ENSMUSP00000127375	TRANSLATION	protein_coding	-	CCDS14979.1	1	480	4	6.85	0.5	334.1	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000094410	Gm38394	ENSMUST00000179598	ENSMUSP00000136026	TRANSLATION	protein_coding,RT	-	CCDS56643.1	1	980	8	0	1.5	109.9	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000041426	Hibch	ENSMUST00000161552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041426	Hibch	ENSMUST00000162609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041426	Hibch	ENSMUST00000044478	ENSMUSP00000045606	TRANSLATION	protein_coding	-	CCDS14948.1	1	385	19	9.75	1.5	460.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000041426	Hibch	ENSMUST00000159352	ENSMUSP00000124976	TRANSLATION	protein_coding	-	-	5	311	17	7	1	344.2	0	-4,0	-	-	5.166	MINOR
ENSMUSG00000041426	Hibch	ENSMUST00000161125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041426	Hibch	ENSMUST00000159431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041426	Hibch	ENSMUST00000186922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025905	Oprk1	ENSMUST00000160339	ENSMUSP00000124030	TRANSLATION	protein_coding	-	CCDS14809.1	5	380	0	3	8.8	200.3	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025905	Oprk1	ENSMUST00000192685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025905	Oprk1	ENSMUST00000027038	ENSMUSP00000027038	TRANSLATION	protein_coding	-	CCDS14809.1	1	380	0	3	8.8	200.3	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025905	Oprk1	ENSMUST00000159083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025905	Oprk1	ENSMUST00000239100	ENSMUSP00000158863	TRANSLATION	protein_coding	-	-	-	409	0	3	3.9	200.3	7	-4,-7	-	-	13.116	MINOR
ENSMUSG00000025905	Oprk1	ENSMUST00000160777	ENSMUSP00000125105	TRANSLATION	protein_coding	-	CCDS14809.1	1	380	0	3	8.8	200.3	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000103421	Golt1a	ENSMUST00000192465	ENSMUSP00000141960	TRANSLATION	protein_coding,RT	stop	-	3	32	0	0	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000103421	Golt1a	ENSMUST00000094557	ENSMUSP00000092136	TRANSLATION	protein_coding,RT	-	CCDS35709.1	1	133	0	0	13.3	57.5	0	-3,-5	-	-	-1	PRINCIPAL:2
ENSMUSG00000055197	Fev	ENSMUST00000159232	ENSMUSP00000125067	TRANSLATION	protein_coding	-	-	1	142	0	0.8	0.5	42.8	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000055197	Fev	ENSMUST00000068631	ENSMUSP00000070878	TRANSLATION	protein_coding	-	CCDS15058.1	1	237	0	1.8	6.3	120.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000055197	Fev	ENSMUST00000162938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026360	Rgs2	ENSMUST00000153527	ENSMUSP00000140548	TRANSLATION	protein_coding	-	-	2	130	0	2.85	0	77.1	0	-4,-7	-	-	7.356	MINOR
ENSMUSG00000026360	Rgs2	ENSMUST00000134817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026360	Rgs2	ENSMUST00000027606	ENSMUSP00000139964	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026360	Rgs2	ENSMUST00000127206	ENSMUSP00000115558	TRANSLATION	protein_coding	-	CCDS15347.1	1	211	0	3.55	7.6	131.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005338	Cadm3	ENSMUST00000005470	ENSMUSP00000005470	TRANSLATION	protein_coding	-	-	5	430	0	5.89	6.3	137.1	1	3,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000005338	Cadm3	ENSMUST00000136540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005338	Cadm3	ENSMUST00000111220	ENSMUSP00000106851	TRANSLATION	protein_coding	-	CCDS15528.1	1	396	0	5.89	6.3	137.1	1	3,-2	-	-	14	PRINCIPAL:2
ENSMUSG00000005338	Cadm3	ENSMUST00000126963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005338	Cadm3	ENSMUST00000157032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044708	Kcnj10	ENSMUST00000056136	ENSMUSP00000054356	TRANSLATION	protein_coding	-	CCDS15512.1	1	379	0	0.8	8.8	446.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048495	Tyw5	ENSMUST00000162663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048495	Tyw5	ENSMUST00000162686	ENSMUSP00000125427	TRANSLATION	protein_coding	-	CCDS14966.2	1	315	12	8.91	11	143.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000048495	Tyw5	ENSMUST00000097732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048495	Tyw5	ENSMUST00000160837	ENSMUSP00000128576	TRANSLATION	protein_coding	start/stop	-	3	255	12	6.678	0	141.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048495	Tyw5	ENSMUST00000079998	ENSMUSP00000078912	TRANSLATION	nonsense_mediated_decay	-	-	1	121	1	2.56	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048495	Tyw5	ENSMUST00000161727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048495	Tyw5	ENSMUST00000160118	ENSMUSP00000125386	TRANSLATION	nonsense_mediated_decay	-	-	3	131	1	2.758	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048495	Tyw5	ENSMUST00000161780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048495	Tyw5	ENSMUST00000161092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048495	Tyw5	ENSMUST00000163039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016526	Dyrk3	ENSMUST00000189756	ENSMUSP00000140050	TRANSLATION	protein_coding	stop	-	3	151	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016526	Dyrk3	ENSMUST00000016670	ENSMUSP00000016670	TRANSLATION	protein_coding	-	CCDS15267.1	1	586	19	1.6	6.3	199	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000026614	Slc30a10	ENSMUST00000238677	ENSMUSP00000158739	TRANSLATION	nonsense_mediated_decay	-	-	-	215	0	0	0	96.4	3	1,-3	-	-	-1	MINOR
ENSMUSG00000026614	Slc30a10	ENSMUST00000061093	ENSMUSP00000053181	TRANSLATION	protein_coding	-	CCDS15599.1	1	470	0	0	1.5	144.5	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000026614	Slc30a10	ENSMUST00000238198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062939	Stat4	ENSMUST00000027277	ENSMUSP00000027277	TRANSLATION	protein_coding	-	CCDS14943.1	1	748	0	16.064	8.8	600.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062939	Stat4	ENSMUST00000168302	ENSMUSP00000130713	TRANSLATION	protein_coding	-	CCDS14943.1	1	748	0	16.064	8.8	600.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062939	Stat4	ENSMUST00000187554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062939	Stat4	ENSMUST00000187053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079164	Tlr5	ENSMUST00000195614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079164	Tlr5	ENSMUST00000191820	ENSMUSP00000141458	TRANSLATION	protein_coding	-	-	-	859	0	1.5	0	230.9	2	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000079164	Tlr5	ENSMUST00000193687	ENSMUSP00000141318	TRANSLATION	protein_coding	stop	-	1	853	0	1	0	225.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000079164	Tlr5	ENSMUST00000110997	ENSMUSP00000106625	TRANSLATION	protein_coding	-	CCDS35815.1	1	873	0	1.5	0.5	230.9	2	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000079164	Tlr5	ENSMUST00000193539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026554	Dcaf8	ENSMUST00000192428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026554	Dcaf8	ENSMUST00000192704	ENSMUSP00000141732	TRANSLATION	protein_coding	-	CCDS15509.1	1	591	0	5.314	2.7	62.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026554	Dcaf8	ENSMUST00000195394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026554	Dcaf8	ENSMUST00000192031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026554	Dcaf8	ENSMUST00000193638	ENSMUSP00000141836	TRANSLATION	nonsense_mediated_decay	-	-	1	411	0	2.694	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026554	Dcaf8	ENSMUST00000074144	ENSMUSP00000073778	TRANSLATION	protein_coding	-	CCDS15509.1	1	591	0	5.314	2.7	62.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026554	Dcaf8	ENSMUST00000194972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026554	Dcaf8	ENSMUST00000195011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026554	Dcaf8	ENSMUST00000191891	ENSMUSP00000141751	TRANSLATION	protein_coding	start	-	3	153	0	1.69	0	35.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026554	Dcaf8	ENSMUST00000195345	ENSMUSP00000141842	TRANSLATION	nonsense_mediated_decay	start	-	5	138	0	1.934	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026554	Dcaf8	ENSMUST00000191689	ENSMUSP00000141731	TRANSLATION	protein_coding	-	CCDS15509.1	1	591	0	5.314	2.7	62.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058267	Mrps14	ENSMUST00000097193	ENSMUSP00000107285	TRANSLATION	protein_coding	-	CCDS83613.1	2	122	0	2.75	0.5	80.7	0	-4,-5	-	-	10.998	MINOR
ENSMUSG00000058267	Mrps14	ENSMUST00000135680	ENSMUSP00000120075	TRANSLATION	protein_coding	-	CCDS15405.1	1	128	0	3.25	13	80.7	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000058267	Mrps14	ENSMUST00000078878	ENSMUSP00000138072	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0.5	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026237	Nmur1	ENSMUST00000212614	ENSMUSP00000148827	TRANSLATION	protein_coding	stop	-	3	65	0	1	0	42.1	5	1,-4	-	-	-1	MINOR
ENSMUSG00000026237	Nmur1	ENSMUST00000027440	ENSMUSP00000027440	TRANSLATION	protein_coding	start	-	1	405	0	2.8	0.5	168.3	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000026237	Nmur1	ENSMUST00000212541	ENSMUSP00000148301	TRANSLATION	protein_coding	-	-	5	372	0	2.2	0	168.3	10	1,-4	-	-	10.08	MINOR
ENSMUSG00000026237	Nmur1	ENSMUST00000212058	ENSMUSP00000148767	TRANSLATION	protein_coding	-	CCDS15119.2	5	428	0	3.16	0.5	168.3	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056211	R3hdm1	ENSMUST00000185471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000187023	ENSMUSP00000139749	TRANSLATION	protein_coding	stop	-	5	486	0	3.3	0	95.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056211	R3hdm1	ENSMUST00000191274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000191016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000187557	ENSMUSP00000140583	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056211	R3hdm1	ENSMUST00000187900	ENSMUSP00000141142	TRANSLATION	protein_coding	-	-	1	549	0	3.3	0	95.3	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000056211	R3hdm1	ENSMUST00000189317	ENSMUSP00000140175	TRANSLATION	protein_coding	stop	-	5	287	0	3.3	0	95.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056211	R3hdm1	ENSMUST00000187605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000189982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000190056	ENSMUSP00000140209	TRANSLATION	protein_coding	start/stop	-	5	385	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056211	R3hdm1	ENSMUST00000185853	ENSMUSP00000139647	TRANSLATION	protein_coding	start/stop	-	3	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056211	R3hdm1	ENSMUST00000190288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000185389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000036288	ENSMUSP00000043103	TRANSLATION	protein_coding	-	CCDS15250.1	5	1135	0	3.3	2.7	95.3	0	-4,-5	-	-	11.982	PRINCIPAL:2
ENSMUSG00000056211	R3hdm1	ENSMUST00000188570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056211	R3hdm1	ENSMUST00000188381	ENSMUSP00000140538	TRANSLATION	protein_coding	stop	-	1	239	0	3.3	0	47.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046300	Olfr1412	ENSMUST00000062964	ENSMUSP00000060291	TRANSLATION	protein_coding	-	CCDS15172.1	-	321	0	0	1.5	158.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046300	Olfr1412	ENSMUST00000190505	ENSMUSP00000150943	TRANSLATION	protein_coding	-	CCDS15172.1	3	321	0	0	1.5	158.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000114299	Gm47791	ENSMUST00000223838	ENSMUSP00000152892	TRANSLATION	protein_coding	-	-	-	139	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000116275	Zc3h11a	ENSMUST00000027736	ENSMUSP00000027736	TRANSLATION	protein_coding	-	CCDS15297.1	1	792	12	0	1.5	187	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026450	Chit1	ENSMUST00000159963	ENSMUSP00000123979	TRANSLATION	protein_coding	-	CCDS15304.1	1	464	2	9.96	1.5	354.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026450	Chit1	ENSMUST00000086475	ENSMUSP00000083666	TRANSLATION	protein_coding	-	CCDS15304.1	1	464	2	9.96	1.5	354.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026450	Chit1	ENSMUST00000160060	ENSMUSP00000124331	TRANSLATION	protein_coding	-	CCDS69943.1	1	396	2	7.36	0.5	288.8	0	3,-2	-	-	4.88	MINOR
ENSMUSG00000037461	Ints7	ENSMUST00000192681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037461	Ints7	ENSMUST00000193569	ENSMUSP00000142177	TRANSLATION	nonsense_mediated_decay	-	-	2	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037461	Ints7	ENSMUST00000194785	ENSMUSP00000141817	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037461	Ints7	ENSMUST00000045450	ENSMUSP00000036277	TRANSLATION	protein_coding	-	CCDS35825.1	1	966	0	0	5.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000037461	Ints7	ENSMUST00000194877	ENSMUSP00000141741	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037461	Ints7	ENSMUST00000193961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045658	Pid1	ENSMUST00000168574	ENSMUSP00000127716	TRANSLATION	protein_coding	-	CCDS15104.2	1	217	0	0	12	67.2	0	-4,-7	-	-	10	PRINCIPAL:2
ENSMUSG00000045658	Pid1	ENSMUST00000175948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045658	Pid1	ENSMUST00000177458	ENSMUSP00000135120	TRANSLATION	protein_coding	-	-	2	97	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000045658	Pid1	ENSMUST00000176559	ENSMUSP00000135164	TRANSLATION	protein_coding	-	-	2	203	0	0	10.1	67.2	0	-4,-6	-	-	9.308	ALTERNATIVE:1
ENSMUSG00000045658	Pid1	ENSMUST00000175996	ENSMUSP00000134979	TRANSLATION	protein_coding	-	-	3	50	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045658	Pid1	ENSMUST00000176822	ENSMUSP00000135425	TRANSLATION	protein_coding	-	-	2	80	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000045658	Pid1	ENSMUST00000187992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045658	Pid1	ENSMUST00000176720	ENSMUSP00000134961	TRANSLATION	protein_coding	-	-	5	100	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000026687	Aldh9a1	ENSMUST00000191715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026687	Aldh9a1	ENSMUST00000193091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026687	Aldh9a1	ENSMUST00000194843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026687	Aldh9a1	ENSMUST00000028004	ENSMUSP00000028004	TRANSLATION	protein_coding	-	CCDS35765.1	1	518	27	10.8	1.7	574.1	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000039349	C130074G19Rik	ENSMUST00000048308	ENSMUSP00000041904	TRANSLATION	protein_coding	-	CCDS35816.1	1	141	0	0	1.5	98.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000040181	Fmo1	ENSMUST00000134098	ENSMUSP00000117398	TRANSLATION	protein_coding	stop	-	1	303	35	3.264	0	553.1	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040181	Fmo1	ENSMUST00000111518	ENSMUSP00000107143	TRANSLATION	protein_coding	-	-	1	182	25	2.15	0	303.8	0	-3,-5	-	-	3.774	MINOR
ENSMUSG00000040181	Fmo1	ENSMUST00000046049	ENSMUSP00000037259	TRANSLATION	protein_coding	-	CCDS15424.1	1	532	45	3.264	6.3	919.8	0	-3,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040181	Fmo1	ENSMUST00000193078	ENSMUSP00000141210	TRANSLATION	protein_coding	stop	-	5	229	35	3	0	436.5	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040181	Fmo1	ENSMUST00000136120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040181	Fmo1	ENSMUST00000193766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040181	Fmo1	ENSMUST00000131058	ENSMUSP00000118534	TRANSLATION	protein_coding	stop	-	2	221	35	3	0	421.6	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040181	Fmo1	ENSMUST00000143902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026511	Srp9	ENSMUST00000193005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026511	Srp9	ENSMUST00000191799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026511	Srp9	ENSMUST00000027792	ENSMUSP00000027792	TRANSLATION	protein_coding	-	CCDS35812.1	1	86	0	2.5	19	43.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026511	Srp9	ENSMUST00000111018	ENSMUSP00000106647	TRANSLATION	protein_coding	-	-	1	63	0	1.75	1.2	0	0	-4,-5	-	-	4.244	MINOR
ENSMUSG00000099032	Tcf24	ENSMUST00000097824	ENSMUSP00000095435	TRANSLATION	protein_coding	-	-	-	66	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000099032	Tcf24	ENSMUST00000185184	ENSMUSP00000138827	TRANSLATION	protein_coding	-	CCDS69862.1	5	166	0	0.4	2.9	46.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000102752	Gm7694	ENSMUST00000179801	ENSMUSP00000136757	TRANSLATION	protein_coding	-	CCDS56652.1	2	270	0	0	1.7	368.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026416	Il20	ENSMUST00000027673	ENSMUSP00000027673	TRANSLATION	protein_coding	-	CCDS15263.1	1	176	0	4.05	5.1	37.9	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000026416	Il20	ENSMUST00000188581	ENSMUSP00000141088	TRANSLATION	protein_coding	-	CCDS78673.1	1	154	0	3.3	0.5	26.8	0	1,-3	-	-	8.742	MINOR
ENSMUSG00000037470	Uggt1	ENSMUST00000046875	ENSMUSP00000037930	TRANSLATION	protein_coding	-	CCDS48238.1	1	1551	2	1.438	1.5	1238.8	0	-2,0	-	-	14	PRINCIPAL:1
ENSMUSG00000037470	Uggt1	ENSMUST00000173082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000172592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000174266	ENSMUSP00000134640	TRANSLATION	nonsense_mediated_decay	-	-	1	265	0	0	0	239.1	0	-2,0	-	-	-1	MINOR
ENSMUSG00000037470	Uggt1	ENSMUST00000173250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000173999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000192159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000174716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037470	Uggt1	ENSMUST00000174224	ENSMUSP00000133971	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037470	Uggt1	ENSMUST00000174142	ENSMUSP00000133929	TRANSLATION	nonsense_mediated_decay	start	-	3	82	0	0	0	33.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037470	Uggt1	ENSMUST00000173166	ENSMUSP00000134078	TRANSLATION	nonsense_mediated_decay	start	-	5	262	0	0.84	0	133.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091013	Vmn1r1	ENSMUST00000169123	ENSMUSP00000133035	TRANSLATION	protein_coding	-	CCDS48475.1	-	306	0	0	0.5	258.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091013	Vmn1r1	ENSMUST00000227586	ENSMUSP00000154404	TRANSLATION	protein_coding	-	CCDS48475.1	-	306	0	0	0.5	258.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091013	Vmn1r1	ENSMUST00000227629	ENSMUSP00000153940	TRANSLATION	protein_coding	-	CCDS48475.1	-	306	0	0	0.5	258.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025968	Ndufs1	ENSMUST00000187835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025968	Ndufs1	ENSMUST00000190095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025968	Ndufs1	ENSMUST00000189664	ENSMUSP00000140819	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000186569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025968	Ndufs1	ENSMUST00000185827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025968	Ndufs1	ENSMUST00000185412	ENSMUSP00000140467	TRANSLATION	protein_coding	stop	-	5	79	8	2.5	0	31.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000185847	ENSMUSP00000141190	TRANSLATION	protein_coding	stop	-	5	61	0	1.5	0	22	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000027111	ENSMUSP00000027111	TRANSLATION	protein_coding	-	CCDS14996.1	1	727	22	18.32	9.5	355	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000025968	Ndufs1	ENSMUST00000187756	ENSMUSP00000140072	TRANSLATION	nonsense_mediated_decay	start	-	3	62	0	1.75	0	26.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000185732	ENSMUSP00000140307	TRANSLATION	protein_coding	stop	-	5	118	11	3.58	0	41.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000188370	ENSMUSP00000139664	TRANSLATION	protein_coding	stop	-	5	135	14	3.83	0	41	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025968	Ndufs1	ENSMUST00000168099	ENSMUSP00000126621	TRANSLATION	protein_coding	-	CCDS14996.1	1	727	22	18.32	9.5	355	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000025968	Ndufs1	ENSMUST00000140612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026602	Nphs2	ENSMUST00000193020	ENSMUSP00000141328	TRANSLATION	protein_coding	start	-	5	265	0	2	0	57.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000026602	Nphs2	ENSMUST00000027896	ENSMUSP00000027896	TRANSLATION	protein_coding	-	CCDS15391.1	1	385	0	3.25	2.7	94.1	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026579	F5	ENSMUST00000086040	ENSMUSP00000083204	TRANSLATION	protein_coding	-	CCDS35754.1	1	2183	20	21.99	0.5	276.4	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026012	Cd28	ENSMUST00000153207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026012	Cd28	ENSMUST00000027165	ENSMUSP00000027165	TRANSLATION	protein_coding	-	CCDS14992.1	1	218	0	2.2	1.5	43.1	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000026012	Cd28	ENSMUST00000132833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026019	Wdr12	ENSMUST00000136461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026019	Wdr12	ENSMUST00000117438	ENSMUSP00000113494	TRANSLATION	protein_coding	-	CCDS14988.1	1	423	0	8.08	13.5	191.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026019	Wdr12	ENSMUST00000147413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026019	Wdr12	ENSMUST00000141417	ENSMUSP00000117747	TRANSLATION	protein_coding	stop	-	5	151	0	2.72	0	78.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026019	Wdr12	ENSMUST00000027173	ENSMUSP00000027173	TRANSLATION	protein_coding	-	CCDS14988.1	1	423	0	8.08	13.5	191.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026019	Wdr12	ENSMUST00000143342	ENSMUSP00000117391	TRANSLATION	protein_coding	stop	-	5	151	0	2.72	0	78.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026019	Wdr12	ENSMUST00000133767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026019	Wdr12	ENSMUST00000122038	ENSMUSP00000113148	TRANSLATION	protein_coding	-	CCDS14988.1	1	423	0	8.08	13.5	191.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000116158	Kiss1	ENSMUST00000178033	ENSMUSP00000136746	TRANSLATION	protein_coding	-	CCDS48362.1	1	126	0	0	1.5	114.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000116158	Kiss1	ENSMUST00000007433	ENSMUSP00000007433	TRANSLATION	protein_coding	-	CCDS48362.1	2	126	0	0	1.5	114.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000026098	Pms1	ENSMUST00000188890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026098	Pms1	ENSMUST00000128337	ENSMUSP00000115352	TRANSLATION	protein_coding	stop	-	3	127	14	3.28	0	45.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026098	Pms1	ENSMUST00000126590	ENSMUSP00000120670	TRANSLATION	protein_coding	stop	-	5	80	9	2	0	38.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026098	Pms1	ENSMUST00000142922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026098	Pms1	ENSMUST00000126412	ENSMUSP00000120340	TRANSLATION	protein_coding	stop	-	2	42	2	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026098	Pms1	ENSMUST00000135246	ENSMUSP00000119632	TRANSLATION	protein_coding	stop	-	1	669	15	6.97	0	184.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026098	Pms1	ENSMUST00000027267	ENSMUSP00000027267	TRANSLATION	protein_coding	-	CCDS14951.1	1	917	15	6.97	0.5	184.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026098	Pms1	ENSMUST00000133358	ENSMUSP00000122418	TRANSLATION	protein_coding	stop	-	3	88	9	2.33	0	38.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026172	Bcs1l	ENSMUST00000113733	ENSMUSP00000109362	TRANSLATION	protein_coding	-	CCDS15051.1	1	418	7	2.75	9.5	64.6	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026172	Bcs1l	ENSMUST00000147464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026172	Bcs1l	ENSMUST00000113732	ENSMUSP00000109361	TRANSLATION	protein_coding	-	CCDS15051.1	5	418	7	2.75	9.5	64.6	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026172	Bcs1l	ENSMUST00000027358	ENSMUSP00000027358	TRANSLATION	protein_coding	-	CCDS15051.1	1	418	7	2.75	9.5	64.6	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026111	Unc50	ENSMUST00000134184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026111	Unc50	ENSMUST00000027285	ENSMUSP00000027285	TRANSLATION	protein_coding	-	CCDS14892.1	1	259	0	0	15	300	9	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000026111	Unc50	ENSMUST00000193979	ENSMUSP00000141818	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	204.9	5	-4,-2	-	-	-1	MINOR
ENSMUSG00000026111	Unc50	ENSMUST00000114925	ENSMUSP00000110575	TRANSLATION	protein_coding	-	CCDS14892.1	1	259	0	0	15	300	9	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000026111	Unc50	ENSMUST00000144617	ENSMUSP00000123684	TRANSLATION	protein_coding	stop	-	5	214	0	0	0	258.3	8	-4,-2	-	-	-1	MINOR
ENSMUSG00000026111	Unc50	ENSMUST00000118059	ENSMUSP00000113135	TRANSLATION	protein_coding	-	CCDS14892.1	5	259	0	0	15	300	9	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000026111	Unc50	ENSMUST00000193713	ENSMUSP00000141651	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	87.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044429	Cryga	ENSMUST00000154012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044429	Cryga	ENSMUST00000061497	ENSMUSP00000058548	TRANSLATION	protein_coding	-	CCDS15014.1	1	174	4	2	8.8	212.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000026158	Ogfrl1	ENSMUST00000186064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026158	Ogfrl1	ENSMUST00000027343	ENSMUSP00000027343	TRANSLATION	protein_coding	-	CCDS35526.1	3	464	0	0	1.5	337.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026158	Ogfrl1	ENSMUST00000188677	ENSMUSP00000139453	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	148.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026158	Ogfrl1	ENSMUST00000189537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056055	Sag	ENSMUST00000177757	ENSMUSP00000136729	TRANSLATION	protein_coding	-	-	5	403	13	10.58	1.5	205.3	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000056055	Sag	ENSMUST00000145385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056055	Sag	ENSMUST00000155393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056055	Sag	ENSMUST00000128761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056055	Sag	ENSMUST00000144334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056055	Sag	ENSMUST00000156381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056055	Sag	ENSMUST00000130886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056055	Sag	ENSMUST00000077772	ENSMUSP00000076948	TRANSLATION	protein_coding	-	CCDS35656.1	1	403	13	10.58	1.5	205.3	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000056055	Sag	ENSMUST00000136708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079457	Gm7609	ENSMUST00000113402	ENSMUSP00000159200	TRANSLATION	protein_coding	-	-	1	296	0	0	1.5	0	4	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000079457	Gm7609	ENSMUST00000161424	ENSMUSP00000159243	TRANSLATION	protein_coding	-	-	-	296	0	0	1.5	0	4	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000053153	Spag16	ENSMUST00000113940	ENSMUSP00000109573	TRANSLATION	protein_coding	-	CCDS69901.1	1	405	0	0.48	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053153	Spag16	ENSMUST00000190833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053153	Spag16	ENSMUST00000161131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053153	Spag16	ENSMUST00000191569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053153	Spag16	ENSMUST00000187159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053153	Spag16	ENSMUST00000065425	ENSMUSP00000069821	TRANSLATION	protein_coding	-	CCDS15027.1	1	639	0	6.43	0.5	123.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053153	Spag16	ENSMUST00000161310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018199	Ro60	ENSMUST00000159879	ENSMUSP00000125623	TRANSLATION	protein_coding	-	CCDS15345.1	1	538	3	8	11.6	320.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018199	Ro60	ENSMUST00000018343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000192334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000191925	ENSMUSP00000141288	TRANSLATION	nonsense_mediated_decay	start	-	3	60	0	1.525	0	78.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000194953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000195859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000191920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000194832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000195605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026626	Ppp2r5a	ENSMUST00000067976	ENSMUSP00000070726	TRANSLATION	protein_coding	-	CCDS15620.1	1	486	0	10.139	1.5	638.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026235	Epha4	ENSMUST00000189934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026235	Epha4	ENSMUST00000188797	ENSMUSP00000140954	TRANSLATION	protein_coding	-	CCDS35627.1	1	986	19	14.84	6.4	836	1	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000026235	Epha4	ENSMUST00000187346	ENSMUSP00000140631	TRANSLATION	protein_coding	start	-	3	117	0	2	0	77.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026235	Epha4	ENSMUST00000188952	ENSMUSP00000139640	TRANSLATION	nonsense_mediated_decay	-	-	1	986	19	14.84	6.4	836	1	3,-2	-	-	-1	MINOR
ENSMUSG00000026235	Epha4	ENSMUST00000190149	ENSMUSP00000140408	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0.8	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026235	Epha4	ENSMUST00000186930	ENSMUSP00000140370	TRANSLATION	protein_coding	stop	-	5	177	0	2.8	0	61	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026235	Epha4	ENSMUST00000027451	ENSMUSP00000027451	TRANSLATION	protein_coding	-	CCDS35627.1	1	986	19	14.84	6.4	836	1	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000026308	Klhl30	ENSMUST00000027533	ENSMUSP00000027533	TRANSLATION	protein_coding	-	CCDS15161.1	1	581	0	3.42	2.7	203	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000087230	Mroh3	ENSMUST00000146112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087230	Mroh3	ENSMUST00000133030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087230	Mroh3	ENSMUST00000168561	ENSMUSP00000148841	TRANSLATION	nonsense_mediated_decay	-	-	5	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000087230	Mroh3	ENSMUST00000212798	ENSMUSP00000148632	TRANSLATION	protein_coding	-	-	5	893	0	0	1	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000087230	Mroh3	ENSMUST00000166708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089675	Ugt1a8	ENSMUST00000113139	ENSMUSP00000108764	TRANSLATION	protein_coding	-	-	5	530	18	3	1.5	778.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025955	Akr1cl	ENSMUST00000160283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025955	Akr1cl	ENSMUST00000161313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025955	Akr1cl	ENSMUST00000069142	ENSMUSP00000063309	TRANSLATION	protein_coding	-	CCDS48282.1	1	322	28	8.08	0.5	196.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025955	Akr1cl	ENSMUST00000159566	ENSMUSP00000123943	TRANSLATION	nonsense_mediated_decay	-	-	5	156	7	2.99	0	71.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025955	Akr1cl	ENSMUST00000162800	ENSMUSP00000124333	TRANSLATION	protein_coding	-	CCDS78599.1	1	291	25	7.33	0.5	188.9	0	-4,-5	-	-	14.034	MINOR
ENSMUSG00000025955	Akr1cl	ENSMUST00000159896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042581	Thsd7b	ENSMUST00000140629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042581	Thsd7b	ENSMUST00000073527	ENSMUSP00000073220	TRANSLATION	protein_coding	-	CCDS15255.1	1	1607	24	4.08	2.7	205.8	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000042581	Thsd7b	ENSMUST00000040311	ENSMUSP00000041716	TRANSLATION	protein_coding	-	-	1	1107	18	3.08	0	138.3	0	1,-4	-	-	7.95	MINOR
ENSMUSG00000042581	Thsd7b	ENSMUST00000143130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042581	Thsd7b	ENSMUST00000140834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042581	Thsd7b	ENSMUST00000152305	ENSMUSP00000117750	TRANSLATION	protein_coding	stop	-	5	379	9	0.48	0	54.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042581	Thsd7b	ENSMUST00000148051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042581	Thsd7b	ENSMUST00000151700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042581	Thsd7b	ENSMUST00000190870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000191293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000189091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026319	Relch	ENSMUST00000186807	ENSMUSP00000140699	TRANSLATION	nonsense_mediated_decay	-	-	1	354	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026319	Relch	ENSMUST00000188969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000039173	ENSMUSP00000039178	TRANSLATION	protein_coding	-	CCDS15206.1	1	1216	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000026319	Relch	ENSMUST00000185750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000086721	ENSMUSP00000083926	TRANSLATION	protein_coding	-	-	5	1216	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000026319	Relch	ENSMUST00000190459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000190501	ENSMUSP00000141162	TRANSLATION	protein_coding	-	CCDS48334.1	1	1192	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000026319	Relch	ENSMUST00000185692	ENSMUSP00000139944	TRANSLATION	nonsense_mediated_decay	start	-	5	82	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000026319	Relch	ENSMUST00000188588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026319	Relch	ENSMUST00000191150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067064	Olfr1416	ENSMUST00000214928	ENSMUSP00000149576	TRANSLATION	protein_coding	-	CCDS15168.1	3	312	0	0.16	6.3	178.5	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000067064	Olfr1416	ENSMUST00000086837	ENSMUSP00000084048	TRANSLATION	protein_coding	-	CCDS15168.1	-	312	0	0.16	6.3	178.5	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015484	Fam163a	ENSMUST00000015628	ENSMUSP00000015628	TRANSLATION	protein_coding	-	CCDS15390.1	1	168	0	0	1.5	205.2	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026601	Axdnd1	ENSMUST00000179744	ENSMUSP00000137094	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026601	Axdnd1	ENSMUST00000213088	ENSMUSP00000148420	TRANSLATION	protein_coding	-	CCDS83611.1	5	1111	0	0	0.5	43.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000026601	Axdnd1	ENSMUST00000180173	ENSMUSP00000136744	TRANSLATION	protein_coding	start	-	1	471	0	0	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026601	Axdnd1	ENSMUST00000179985	ENSMUSP00000136339	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026601	Axdnd1	ENSMUST00000212747	ENSMUSP00000148583	TRANSLATION	protein_coding	-	-	5	275	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026601	Axdnd1	ENSMUST00000178036	ENSMUSP00000137354	TRANSLATION	protein_coding	-	-	5	982	0	0	0	43.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000026601	Axdnd1	ENSMUST00000179572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026601	Axdnd1	ENSMUST00000027895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026601	Axdnd1	ENSMUST00000212342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026601	Axdnd1	ENSMUST00000177824	ENSMUSP00000135900	TRANSLATION	protein_coding	start	-	5	880	0	0	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026601	Axdnd1	ENSMUST00000177858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034353	Ramp1	ENSMUST00000165855	ENSMUSP00000128679	TRANSLATION	protein_coding	-	CCDS78648.1	2	103	0	1	0.5	26.6	0	3,-2	-	-	3	MINOR
ENSMUSG00000034353	Ramp1	ENSMUST00000188475	ENSMUSP00000139720	TRANSLATION	protein_coding	-	CCDS48321.1	3	105	0	1	0.5	26.3	0	3,-2	-	-	3	MINOR
ENSMUSG00000034353	Ramp1	ENSMUST00000097648	ENSMUSP00000095253	TRANSLATION	protein_coding	-	CCDS15158.1	1	148	0	2	5.1	156.9	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000034432	Cops8	ENSMUST00000190700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034432	Cops8	ENSMUST00000186750	ENSMUSP00000139836	TRANSLATION	protein_coding	stop	-	5	80	0	2.58	0	49.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034432	Cops8	ENSMUST00000190057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034432	Cops8	ENSMUST00000036153	ENSMUSP00000035884	TRANSLATION	protein_coding	-	CCDS15153.1	1	209	0	6.33	14.8	134	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034432	Cops8	ENSMUST00000191510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034432	Cops8	ENSMUST00000186152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034432	Cops8	ENSMUST00000189107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034432	Cops8	ENSMUST00000186882	ENSMUSP00000140707	TRANSLATION	protein_coding	start	-	5	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034432	Cops8	ENSMUST00000189309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026556	Vangl2	ENSMUST00000138714	ENSMUSP00000117736	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	77	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026556	Vangl2	ENSMUST00000153662	ENSMUSP00000116522	TRANSLATION	protein_coding	stop	-	3	130	0	0	0	119.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000026556	Vangl2	ENSMUST00000148363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026556	Vangl2	ENSMUST00000027837	ENSMUSP00000027837	TRANSLATION	protein_coding	-	CCDS15505.1	1	521	0	0	12.5	833.9	5	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026556	Vangl2	ENSMUST00000111264	ENSMUSP00000106895	TRANSLATION	protein_coding	-	-	1	561	0	0	0	804.2	5	-4,-5	-	-	4.218	MINOR
ENSMUSG00000026556	Vangl2	ENSMUST00000111263	ENSMUSP00000106894	TRANSLATION	protein_coding	-	CCDS15505.1	5	521	0	0	12.5	833.9	5	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000058904	Olfr1413	ENSMUST00000214239	ENSMUSP00000150792	TRANSLATION	protein_coding	-	CCDS15171.1	5	323	0	0	1.5	170	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058904	Olfr1413	ENSMUST00000074859	ENSMUSP00000074402	TRANSLATION	protein_coding	-	CCDS15171.1	-	323	0	0	1.5	170	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046062	Ppp1r15b	ENSMUST00000052529	ENSMUSP00000057062	TRANSLATION	protein_coding	-	CCDS15291.1	1	697	0	1	0.5	1174	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000046062	Ppp1r15b	ENSMUST00000122956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070738	Dgkd	ENSMUST00000190061	ENSMUSP00000139658	TRANSLATION	protein_coding	start	-	5	364	0	0	0	84.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070738	Dgkd	ENSMUST00000190243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070738	Dgkd	ENSMUST00000185260	ENSMUSP00000140070	TRANSLATION	protein_coding	start/stop	-	3	218	0	0	0	93	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070738	Dgkd	ENSMUST00000189448	ENSMUSP00000139626	TRANSLATION	protein_coding	start	-	3	197	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070738	Dgkd	ENSMUST00000189726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070738	Dgkd	ENSMUST00000027517	ENSMUSP00000027517	TRANSLATION	protein_coding	-	CCDS48312.1	5	1220	12	6.925	0.5	449.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070738	Dgkd	ENSMUST00000191589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067604	Nms	ENSMUST00000160214	ENSMUSP00000125166	TRANSLATION	protein_coding	stop	-	5	138	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000067604	Nms	ENSMUST00000088029	ENSMUSP00000085346	TRANSLATION	protein_coding	-	CCDS14902.1	1	153	0	0	1.5	0	0	-1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000026153	Fam135a	ENSMUST00000185807	ENSMUSP00000140078	TRANSLATION	protein_coding	start/stop	-	5	161	3	0	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026153	Fam135a	ENSMUST00000186999	ENSMUSP00000140198	TRANSLATION	protein_coding	stop	-	5	851	0	0	0	60.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026153	Fam135a	ENSMUST00000186331	ENSMUSP00000140947	TRANSLATION	nonsense_mediated_decay	start	-	1	300	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026153	Fam135a	ENSMUST00000187369	ENSMUSP00000140766	TRANSLATION	protein_coding	-	-	5	1310	8	0	0.5	269.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026153	Fam135a	ENSMUST00000185525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026153	Fam135a	ENSMUST00000187752	ENSMUSP00000139633	TRANSLATION	protein_coding	-	-	5	1293	8	0	0	269.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026153	Fam135a	ENSMUST00000027337	ENSMUSP00000027337	TRANSLATION	protein_coding	-	CCDS14853.1	5	1506	8	0	0.5	269.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000026153	Fam135a	ENSMUST00000187619	ENSMUSP00000139993	TRANSLATION	protein_coding	start	-	5	271	8	0	0	153.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026153	Fam135a	ENSMUST00000188712	ENSMUSP00000139754	TRANSLATION	nonsense_mediated_decay	-	-	5	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054702	Ap1s3	ENSMUST00000162342	ENSMUSP00000125268	TRANSLATION	protein_coding	-	CCDS35628.1	1	154	0	3.58	14.1	194.2	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000054702	Ap1s3	ENSMUST00000160706	ENSMUSP00000125631	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	1.3	0	70.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000054702	Ap1s3	ENSMUST00000159312	ENSMUSP00000125119	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	1.066	0	70.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000192850	ENSMUSP00000141428	TRANSLATION	nonsense_mediated_decay	-	-	1	155	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000155808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026708	Cenpl	ENSMUST00000028035	ENSMUSP00000028035	TRANSLATION	protein_coding	-	-	1	329	0	0	0	112.9	0	-4,-7	-	-	5.928	ALTERNATIVE:2
ENSMUSG00000026708	Cenpl	ENSMUST00000195571	ENSMUSP00000142254	TRANSLATION	nonsense_mediated_decay	-	-	2	155	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000143486	ENSMUSP00000138058	TRANSLATION	nonsense_mediated_decay	-	-	1	62	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000192150	ENSMUSP00000141326	TRANSLATION	nonsense_mediated_decay	-	-	2	62	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000195212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026708	Cenpl	ENSMUST00000194855	ENSMUSP00000141872	TRANSLATION	nonsense_mediated_decay	-	-	2	155	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026708	Cenpl	ENSMUST00000111620	ENSMUSP00000107247	TRANSLATION	protein_coding	-	CCDS48413.1	1	345	0	0	4	114.1	0	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000026708	Cenpl	ENSMUST00000111618	ENSMUSP00000107245	TRANSLATION	protein_coding	-	CCDS48413.1	5	345	0	0	4	114.1	0	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000026327	Serpinb11	ENSMUST00000191425	ENSMUSP00000141180	TRANSLATION	protein_coding	stop	-	5	152	0	2.96	0	117.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026327	Serpinb11	ENSMUST00000027566	ENSMUSP00000027566	TRANSLATION	protein_coding	-	CCDS15218.1	1	388	0	5.96	1.5	400.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042793	Lgr6	ENSMUST00000044828	ENSMUSP00000035444	TRANSLATION	protein_coding	-	CCDS15314.1	1	967	0	13.12	1.5	199.5	7	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042793	Lgr6	ENSMUST00000139369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042793	Lgr6	ENSMUST00000137968	ENSMUSP00000122334	TRANSLATION	protein_coding	-	-	1	690	0	7.07	0	58.5	7	-4,-6	-	-	0	MINOR
ENSMUSG00000026701	Prdx6	ENSMUST00000051925	ENSMUSP00000050703	TRANSLATION	protein_coding	-	CCDS78724.1	2	200	0	4.132	0.5	121	0	-4,-2	-	-	9.09	MINOR
ENSMUSG00000026701	Prdx6	ENSMUST00000156678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026701	Prdx6	ENSMUST00000194613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026701	Prdx6	ENSMUST00000130867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026701	Prdx6	ENSMUST00000156318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026701	Prdx6	ENSMUST00000192639	ENSMUSP00000142093	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026701	Prdx6	ENSMUST00000139387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026701	Prdx6	ENSMUST00000071718	ENSMUSP00000071636	TRANSLATION	protein_coding	-	CCDS15415.1	1	224	0	5	15.8	140.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026701	Prdx6	ENSMUST00000155135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003721	Insig2	ENSMUST00000071064	ENSMUSP00000065485	TRANSLATION	protein_coding	-	CCDS15236.1	1	225	0	0	11.3	159.7	11	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000003721	Insig2	ENSMUST00000162790	ENSMUSP00000124697	TRANSLATION	protein_coding	stop	-	3	146	0	0	0	102.7	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000161818	ENSMUSP00000123993	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000159125	ENSMUSP00000123729	TRANSLATION	protein_coding	stop	-	2	59	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000162582	ENSMUSP00000125046	TRANSLATION	protein_coding	stop	-	5	90	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000161068	ENSMUSP00000125216	TRANSLATION	protein_coding	stop	-	5	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000160968	ENSMUSP00000123747	TRANSLATION	protein_coding	-	CCDS15236.1	5	225	0	0	11.3	159.7	11	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000003721	Insig2	ENSMUST00000160688	ENSMUSP00000123702	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000162019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003721	Insig2	ENSMUST00000186915	ENSMUSP00000140292	TRANSLATION	protein_coding	-	CCDS78670.1	3	117	0	0	5.4	103.4	5	-3,-6	-	-	3.903	MINOR
ENSMUSG00000003721	Insig2	ENSMUST00000159528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003721	Insig2	ENSMUST00000159192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003721	Insig2	ENSMUST00000159085	ENSMUSP00000124345	TRANSLATION	protein_coding	-	CCDS15236.1	1	225	0	0	11.3	159.7	11	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000003721	Insig2	ENSMUST00000003818	ENSMUSP00000003818	TRANSLATION	protein_coding	-	CCDS15236.1	1	225	0	0	11.3	159.7	11	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000094127	G530012D18Rik	ENSMUST00000178024	ENSMUSP00000136816	TRANSLATION	protein_coding	start	-	5	139	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000026615	Eprs	ENSMUST00000192049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000192588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000194157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000191900	ENSMUSP00000141467	TRANSLATION	nonsense_mediated_decay	-	-	3	131	0	3.33	0	21.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026615	Eprs	ENSMUST00000193788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000192324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000046514	ENSMUSP00000045841	TRANSLATION	protein_coding	-	CCDS35818.1	1	1512	26	25.14	1.5	1008.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026615	Eprs	ENSMUST00000192284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026615	Eprs	ENSMUST00000195824	ENSMUSP00000141550	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	2.33	0	21.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038473	Nos1ap	ENSMUST00000161221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038473	Nos1ap	ENSMUST00000160456	ENSMUSP00000125251	TRANSLATION	protein_coding	-	CCDS48438.1	5	503	0	3.45	3.9	115.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038473	Nos1ap	ENSMUST00000161485	ENSMUSP00000124169	TRANSLATION	protein_coding	stop	-	3	228	0	2.65	0	83.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038473	Nos1ap	ENSMUST00000162709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038473	Nos1ap	ENSMUST00000160816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038473	Nos1ap	ENSMUST00000159665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038473	Nos1ap	ENSMUST00000162090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038473	Nos1ap	ENSMUST00000160466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038473	Nos1ap	ENSMUST00000161966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097918	Ascl5	ENSMUST00000180436	ENSMUSP00000137746	TRANSLATION	protein_coding	-	CCDS59541.1	-	188	0	0.2	1.5	59.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045954	Cavin2	ENSMUST00000051572	ENSMUSP00000055694	TRANSLATION	protein_coding	-	CCDS14940.1	1	418	0	0.8	1.5	310.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050296	Abca12	ENSMUST00000087268	ENSMUSP00000084523	TRANSLATION	protein_coding	-	CCDS48286.1	1	2595	18	8.04	1.5	377.8	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050296	Abca12	ENSMUST00000188752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050296	Abca12	ENSMUST00000191520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050296	Abca12	ENSMUST00000187097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050296	Abca12	ENSMUST00000189102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072258	Taf1a	ENSMUST00000195798	ENSMUSP00000141334	TRANSLATION	protein_coding	start	-	2	91	0	0	0	73.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072258	Taf1a	ENSMUST00000192076	ENSMUSP00000142213	TRANSLATION	protein_coding	stop	-	5	360	0	0	0	334.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072258	Taf1a	ENSMUST00000097043	ENSMUSP00000094808	TRANSLATION	protein_coding	-	-	5	453	0	0	0	430.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047330	Kcne4	ENSMUST00000057262	ENSMUSP00000055415	TRANSLATION	protein_coding	-	CCDS15088.1	1	170	0	0.6	2.7	33.6	1	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000047330	Kcne4	ENSMUST00000187432	ENSMUSP00000140235	TRANSLATION	protein_coding	-	-	5	64	0	0.6	0	32.8	1	-4,-6	-	-	11.856	ALTERNATIVE:2
ENSMUSG00000063558	Aox1	ENSMUST00000160168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063558	Aox1	ENSMUST00000001027	ENSMUSP00000001027	TRANSLATION	protein_coding	-	CCDS35575.1	1	1333	79	31.75	1.5	1101.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045515	Pou3f3	ENSMUST00000054883	ENSMUSP00000052088	TRANSLATION	protein_coding	-	CCDS14917.1	-	497	0	0.6	1.5	194.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045515	Pou3f3	ENSMUST00000239323	ENSMUSP00000159226	TRANSLATION	protein_coding	-	CCDS14917.1	-	497	0	0.6	1.5	194.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066755	Tnfsf18	ENSMUST00000086084	ENSMUSP00000083251	TRANSLATION	protein_coding	-	CCDS15417.1	1	173	0	1.5	0.5	21.8	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026686	Lmx1a	ENSMUST00000111377	ENSMUSP00000107008	TRANSLATION	protein_coding	-	CCDS15460.1	5	382	15	3.6	8.4	174.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026686	Lmx1a	ENSMUST00000028003	ENSMUSP00000028003	TRANSLATION	protein_coding	-	CCDS15460.1	1	382	15	3.6	8.4	174.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028354	Fmn2	ENSMUST00000195621	ENSMUSP00000142288	TRANSLATION	protein_coding	start/stop	-	3	145	0	1.34	0	42.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028354	Fmn2	ENSMUST00000193905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028354	Fmn2	ENSMUST00000191971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028354	Fmn2	ENSMUST00000030039	ENSMUSP00000030039	TRANSLATION	protein_coding	-	CCDS48459.1	1	1578	0	6.32	0.5	382.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028354	Fmn2	ENSMUST00000191821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028354	Fmn2	ENSMUST00000195300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026674	Ddr2	ENSMUST00000192312	ENSMUSP00000142191	TRANSLATION	protein_coding	stop	-	3	129	0	2.3	0	45.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026674	Ddr2	ENSMUST00000194690	ENSMUSP00000141443	TRANSLATION	protein_coding	-	CCDS48436.1	1	854	23	11.73	6.3	361.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000026674	Ddr2	ENSMUST00000027985	ENSMUSP00000027985	TRANSLATION	protein_coding	-	CCDS48436.1	1	854	23	11.73	6.3	361.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000026674	Ddr2	ENSMUST00000195867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026674	Ddr2	ENSMUST00000194619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026674	Ddr2	ENSMUST00000170800	ENSMUSP00000129624	TRANSLATION	protein_coding	-	CCDS48436.1	5	854	23	11.73	6.3	361.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000052428	Tmco1	ENSMUST00000193446	ENSMUSP00000141241	TRANSLATION	protein_coding	start	-	1	200	0	0	0	132.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000052428	Tmco1	ENSMUST00000097473	ENSMUSP00000095081	TRANSLATION	nonsense_mediated_decay	-	-	1	188	0	0	19.1	148.6	2	1,-3	-	-	-1	MINOR
ENSMUSG00000052428	Tmco1	ENSMUST00000195015	ENSMUSP00000142042	TRANSLATION	protein_coding	-	CCDS15456.1	1	188	0	0	19.1	148.6	2	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000052428	Tmco1	ENSMUST00000193101	ENSMUSP00000141373	TRANSLATION	protein_coding	start	-	5	127	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026339	Ccdc93	ENSMUST00000156459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026339	Ccdc93	ENSMUST00000112621	ENSMUSP00000108240	TRANSLATION	protein_coding	-	CCDS15238.2	1	628	0	0	7.5	259.1	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000026339	Ccdc93	ENSMUST00000036025	ENSMUSP00000043442	TRANSLATION	protein_coding	-	CCDS15237.1	1	629	0	0	7.5	259.1	0	-4,-5	-	-	9	PRINCIPAL:4
ENSMUSG00000026339	Ccdc93	ENSMUST00000152959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026339	Ccdc93	ENSMUST00000128924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026339	Ccdc93	ENSMUST00000155673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013973	Dedd	ENSMUST00000111300	ENSMUSP00000106931	TRANSLATION	protein_coding	-	CCDS15490.1	1	318	0	0	8.8	62.5	0	-4,-7	-	-	8.88	PRINCIPAL:1
ENSMUSG00000013973	Dedd	ENSMUST00000131653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013973	Dedd	ENSMUST00000097467	ENSMUSP00000095075	TRANSLATION	protein_coding	-	CCDS15490.1	1	318	0	0	8.8	62.5	0	-4,-7	-	-	8.88	PRINCIPAL:1
ENSMUSG00000013973	Dedd	ENSMUST00000142063	ENSMUSP00000120861	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013973	Dedd	ENSMUST00000129116	ENSMUSP00000120278	TRANSLATION	protein_coding	stop	-	3	234	0	0	0	62.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013973	Dedd	ENSMUST00000135150	ENSMUSP00000120993	TRANSLATION	protein_coding	stop	-	5	31	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013973	Dedd	ENSMUST00000064950	ENSMUSP00000068419	TRANSLATION	protein_coding	-	CCDS15490.1	1	318	0	0	8.8	62.5	0	-4,-7	-	-	8.88	PRINCIPAL:1
ENSMUSG00000013973	Dedd	ENSMUST00000157015	ENSMUSP00000119948	TRANSLATION	protein_coding	stop	-	2	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013973	Dedd	ENSMUST00000127830	ENSMUSP00000122628	TRANSLATION	protein_coding	stop	-	2	155	0	0	0	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013973	Dedd	ENSMUST00000111299	ENSMUSP00000106930	TRANSLATION	protein_coding	-	CCDS15490.1	1	318	0	0	8.8	62.5	0	-4,-7	-	-	8.88	PRINCIPAL:1
ENSMUSG00000037624	Kcnk2	ENSMUST00000192529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037624	Kcnk2	ENSMUST00000180044	ENSMUSP00000136513	TRANSLATION	nonsense_mediated_decay	-	-	1	152	0	1.48	0	0	4	-4,-1	-	-	-1	MINOR
ENSMUSG00000037624	Kcnk2	ENSMUST00000110920	ENSMUSP00000106545	TRANSLATION	protein_coding	-	CCDS48481.1	5	411	0	5.75	12.8	139.2	7	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000037624	Kcnk2	ENSMUST00000194172	ENSMUSP00000142176	TRANSLATION	protein_coding	-	-	5	237	0	3.5	0	67.6	5	-4,-1	-	-	3.204	MINOR
ENSMUSG00000037624	Kcnk2	ENSMUST00000193319	ENSMUSP00000141891	TRANSLATION	protein_coding	-	CCDS48480.1	1	426	0	5.75	7.5	139.2	7	-4,-7	-	-	14.204	MINOR
ENSMUSG00000037624	Kcnk2	ENSMUST00000192723	ENSMUSP00000141849	TRANSLATION	protein_coding	-	CCDS48481.1	1	411	0	5.75	12.8	139.2	7	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000037624	Kcnk2	ENSMUST00000193686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037624	Kcnk2	ENSMUST00000079451	ENSMUSP00000078416	TRANSLATION	protein_coding	-	CCDS78773.1	1	414	0	5.75	12.8	139.2	7	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000037624	Kcnk2	ENSMUST00000195016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037624	Kcnk2	ENSMUST00000194402	ENSMUSP00000142026	TRANSLATION	protein_coding	-	-	5	422	0	5.75	12.8	139.2	7	-4,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000032719	Sbspon	ENSMUST00000040695	ENSMUSP00000047730	TRANSLATION	protein_coding	-	CCDS14828.1	1	264	3	0	7.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078193	Gm2000	ENSMUST00000102782	ENSMUSP00000099843	TRANSLATION	protein_coding	-	-	-	123	0	1	17.5	73.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000101415	Gm28168	ENSMUST00000191265	ENSMUSP00000139435	TRANSLATION	protein_coding	-	-	5	180	11	2	0	170.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000191368	ENSMUSP00000140743	TRANSLATION	protein_coding	-	CCDS48322.1	1	185	0	5.74	19.5	107.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000171112	ENSMUSP00000131330	TRANSLATION	protein_coding	-	CCDS48322.1	1	185	0	5.74	19.5	107.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000171165	ENSMUSP00000126173	TRANSLATION	protein_coding	-	CCDS48322.1	1	185	0	5.74	19.5	107.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000185950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034343	Ube2f	ENSMUST00000059743	ENSMUSP00000054303	TRANSLATION	protein_coding	-	CCDS48322.1	1	185	0	5.74	19.5	107.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000191533	ENSMUSP00000140316	TRANSLATION	protein_coding	stop	-	5	56	0	1.66	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034343	Ube2f	ENSMUST00000189589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034343	Ube2f	ENSMUST00000178627	ENSMUSP00000136915	TRANSLATION	protein_coding	-	CCDS48322.1	1	185	0	5.74	19.5	107.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034343	Ube2f	ENSMUST00000188576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034343	Ube2f	ENSMUST00000187494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034343	Ube2f	ENSMUST00000185697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000161750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000041023	ENSMUSP00000036093	TRANSLATION	protein_coding	-	CCDS35719.1	1	1040	0	1.05	0.5	37	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000041879	Ipo9	ENSMUST00000161032	ENSMUSP00000124779	TRANSLATION	nonsense_mediated_decay	-	-	1	655	0	1.05	0	37	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000041879	Ipo9	ENSMUST00000162858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000159173	ENSMUSP00000123869	TRANSLATION	nonsense_mediated_decay	start	-	5	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041879	Ipo9	ENSMUST00000159089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000159487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000161838	ENSMUSP00000125646	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000041879	Ipo9	ENSMUST00000161189	ENSMUSP00000124492	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000041879	Ipo9	ENSMUST00000159017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000161934	ENSMUSP00000124210	TRANSLATION	protein_coding	start	-	3	171	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041879	Ipo9	ENSMUST00000161704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000161135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041879	Ipo9	ENSMUST00000161258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047343	Mettl21c	ENSMUST00000162750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047343	Mettl21c	ENSMUST00000061421	ENSMUSP00000061229	TRANSLATION	protein_coding	-	CCDS14927.1	1	248	16	3.45	1.5	104.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047343	Mettl21c	ENSMUST00000159881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014226	Cacybp	ENSMUST00000014370	ENSMUSP00000014370	TRANSLATION	protein_coding	-	CCDS15406.1	1	229	0	5.41	7.5	183.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000014226	Cacybp	ENSMUST00000194167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014226	Cacybp	ENSMUST00000195654	ENSMUSP00000142252	TRANSLATION	protein_coding	stop	-	3	135	0	3.08	0	136	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000161453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000159325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000159122	ENSMUSP00000124137	TRANSLATION	protein_coding	-	CCDS48299.1	1	229	0	0	0.5	131	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000159320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000162038	ENSMUSP00000125643	TRANSLATION	nonsense_mediated_decay	-	-	2	116	0	0	0	131	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052760	A630001G21Rik	ENSMUST00000064788	ENSMUSP00000070374	TRANSLATION	protein_coding	-	CCDS48299.1	2	229	0	0	0.5	131	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026405	C4bp	ENSMUST00000027657	ENSMUSP00000027657	TRANSLATION	protein_coding	-	CCDS35700.1	1	469	0	8.16	0.5	215.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000026405	C4bp	ENSMUST00000171642	ENSMUSP00000130533	TRANSLATION	protein_coding	start/stop	-	3	199	0	3.615	0	95.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026405	C4bp	ENSMUST00000137276	ENSMUSP00000121185	TRANSLATION	protein_coding	stop	-	5	256	0	4.1	0	106	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026405	C4bp	ENSMUST00000190624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025991	Cps1	ENSMUST00000027144	ENSMUSP00000027144	TRANSLATION	protein_coding	-	CCDS35605.1	1	1500	40	34.5	7.6	866.4	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000051590	Map3k19	ENSMUST00000189398	ENSMUSP00000140449	TRANSLATION	protein_coding	start	-	5	467	11	2.17	0	190.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051590	Map3k19	ENSMUST00000191333	ENSMUSP00000141029	TRANSLATION	protein_coding	start	-	5	515	19	3.1	0	219.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051590	Map3k19	ENSMUST00000208183	ENSMUSP00000146463	TRANSLATION	protein_coding	-	-	5	1515	19	3.1	0.5	248.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051590	Map3k19	ENSMUST00000238383	ENSMUSP00000158583	TRANSLATION	protein_coding	start	-	-	465	13	2.35	0	202.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051590	Map3k19	ENSMUST00000187653	ENSMUSP00000140930	TRANSLATION	protein_coding	start	-	5	1211	19	3.1	0	219.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051590	Map3k19	ENSMUST00000061512	ENSMUSP00000056254	TRANSLATION	protein_coding	-	CCDS48347.1	5	1311	19	3.1	0.5	219.6	0	-4,-5	-	-	16.248	MINOR
ENSMUSG00000026196	Bard1	ENSMUST00000027393	ENSMUSP00000027393	TRANSLATION	protein_coding	-	CCDS15029.1	1	765	0	9.05	1.5	215.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026470	Stx6	ENSMUST00000192091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026470	Stx6	ENSMUST00000191769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026470	Stx6	ENSMUST00000192690	ENSMUSP00000141362	TRANSLATION	protein_coding	start	-	1	91	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026470	Stx6	ENSMUST00000195302	ENSMUSP00000142089	TRANSLATION	protein_coding	-	-	1	255	0	5.37	0	130.9	0	-4,-5	-	-	9.042	MINOR
ENSMUSG00000026470	Stx6	ENSMUST00000192519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026470	Stx6	ENSMUST00000027743	ENSMUSP00000027743	TRANSLATION	protein_coding	-	CCDS35741.1	1	255	0	5.4	3.5	179.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000026470	Stx6	ENSMUST00000195693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026470	Stx6	ENSMUST00000192311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026470	Stx6	ENSMUST00000193059	ENSMUSP00000141976	TRANSLATION	nonsense_mediated_decay	-	-	5	199	0	4.25	0	130.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026470	Stx6	ENSMUST00000194158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016524	Il19	ENSMUST00000112465	ENSMUSP00000108084	TRANSLATION	protein_coding	-	CCDS15264.1	1	176	0	4.68	1.5	28.7	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000016524	Il19	ENSMUST00000187916	ENSMUSP00000141175	TRANSLATION	protein_coding	-	-	2	101	0	2.75	0	0	0	-4,-7	-	-	2.142	MINOR
ENSMUSG00000016524	Il19	ENSMUST00000187410	ENSMUSP00000139406	TRANSLATION	protein_coding	-	CCDS15264.1	5	176	0	4.68	1.5	28.7	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000016524	Il19	ENSMUST00000016668	ENSMUSP00000016668	TRANSLATION	protein_coding	-	CCDS15264.1	1	176	0	4.68	1.5	28.7	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000036962	Cfap221	ENSMUST00000174458	ENSMUSP00000134719	TRANSLATION	protein_coding	stop	-	5	178	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036962	Cfap221	ENSMUST00000174370	ENSMUSP00000134576	TRANSLATION	protein_coding	-	CCDS48340.1	5	836	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036962	Cfap221	ENSMUST00000037840	ENSMUSP00000037703	TRANSLATION	protein_coding	-	CCDS48340.1	1	836	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026700	Tnfsf4	ENSMUST00000028024	ENSMUSP00000028024	TRANSLATION	protein_coding	-	CCDS15416.1	1	198	0	1.5	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026571	Dcaf6	ENSMUST00000194869	ENSMUSP00000141401	TRANSLATION	protein_coding	start/stop	-	3	283	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026571	Dcaf6	ENSMUST00000195686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026571	Dcaf6	ENSMUST00000195220	ENSMUSP00000141292	TRANSLATION	protein_coding	start/stop	-	3	151	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026571	Dcaf6	ENSMUST00000027856	ENSMUSP00000027856	TRANSLATION	protein_coding	-	CCDS48424.1	1	876	0	3.335	0.5	31.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026571	Dcaf6	ENSMUST00000193353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026189	Pecr	ENSMUST00000129458	ENSMUSP00000121931	TRANSLATION	nonsense_mediated_decay	-	-	5	44	6	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026189	Pecr	ENSMUST00000134840	ENSMUSP00000120890	TRANSLATION	nonsense_mediated_decay	-	-	1	90	12	2	0	44.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026189	Pecr	ENSMUST00000097698	ENSMUSP00000095304	TRANSLATION	protein_coding	-	-	1	260	28	6.19	0	154.3	0	-4,-7	-	-	15.222	MINOR
ENSMUSG00000026189	Pecr	ENSMUST00000027381	ENSMUSP00000027381	TRANSLATION	protein_coding	-	CCDS35607.1	1	303	28	7.58	2.7	154.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026574	Dpt	ENSMUST00000027861	ENSMUSP00000027861	TRANSLATION	protein_coding	-	CCDS15437.1	1	201	0	0	8.8	118.7	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000066595	Flvcr1	ENSMUST00000194917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066595	Flvcr1	ENSMUST00000085635	ENSMUSP00000082777	TRANSLATION	protein_coding	-	CCDS35823.1	1	560	0	0	0.5	92.7	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000066595	Flvcr1	ENSMUST00000194589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066595	Flvcr1	ENSMUST00000191946	ENSMUSP00000141578	TRANSLATION	protein_coding	-	CCDS83664.1	-	246	0	0	1.5	36.3	4	-4,-5	-	-	2.352	MINOR
ENSMUSG00000066595	Flvcr1	ENSMUST00000193399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066595	Flvcr1	ENSMUST00000192666	ENSMUSP00000141985	TRANSLATION	nonsense_mediated_decay	start	-	1	246	0	0	0	35.7	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026420	Il24	ENSMUST00000187650	ENSMUSP00000140149	TRANSLATION	protein_coding	-	-	1	181	0	2.804	0	27.7	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000026420	Il24	ENSMUST00000121040	ENSMUSP00000113064	TRANSLATION	protein_coding	-	CCDS15262.2	1	220	0	2.804	0.5	26.8	0	-4,-2	-	-	11.808	PRINCIPAL:2
ENSMUSG00000026420	Il24	ENSMUST00000188148	ENSMUSP00000139907	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026420	Il24	ENSMUST00000191279	ENSMUSP00000140821	TRANSLATION	nonsense_mediated_decay	-	-	1	158	0	0.84	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016481	Cr1l	ENSMUST00000193829	ENSMUSP00000141996	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	1	0	0	1	-3,-7	-	-	-1	MINOR
ENSMUSG00000016481	Cr1l	ENSMUST00000194732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016481	Cr1l	ENSMUST00000193719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016481	Cr1l	ENSMUST00000075451	ENSMUSP00000074902	TRANSLATION	protein_coding	-	CCDS15641.1	1	440	0	8.614	0.5	183.3	2	-2,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000016481	Cr1l	ENSMUST00000193094	ENSMUSP00000142309	TRANSLATION	protein_coding	-	-	1	429	0	8.614	0.5	183.3	2	-2,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000016481	Cr1l	ENSMUST00000192405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016481	Cr1l	ENSMUST00000194111	ENSMUSP00000142069	TRANSLATION	protein_coding	-	-	1	356	0	7.414	0	183.3	1	-4,-5	-	-	9.6	MINOR
ENSMUSG00000016481	Cr1l	ENSMUST00000194062	ENSMUSP00000142104	TRANSLATION	protein_coding	start	-	3	164	0	3.164	0	75.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000016481	Cr1l	ENSMUST00000195586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016481	Cr1l	ENSMUST00000191775	ENSMUSP00000141250	TRANSLATION	protein_coding	stop	-	5	255	0	5.25	0	136	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090171	Ugt1a2	ENSMUST00000049289	ENSMUSP00000037258	TRANSLATION	protein_coding	-	CCDS15141.1	1	533	18	3	1.5	815.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033964	Zbtb41	ENSMUST00000200243	ENSMUSP00000142797	TRANSLATION	protein_coding	stop	-	5	657	39	6.655	1.2	195.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033964	Zbtb41	ENSMUST00000039867	ENSMUSP00000045570	TRANSLATION	protein_coding	-	CCDS48385.1	1	908	51	7.855	5.1	231.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033964	Zbtb41	ENSMUST00000199011	ENSMUSP00000143768	TRANSLATION	nonsense_mediated_decay	start	-	1	219	4	0.33	0	18.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000125306	ENSMUSP00000119969	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000137868	ENSMUSP00000141009	TRANSLATION	protein_coding	start	-	1	3010	6	16.3	0	929.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000187214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026207	Speg	ENSMUST00000146705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026207	Speg	ENSMUST00000125118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026207	Speg	ENSMUST00000087122	ENSMUSP00000084361	TRANSLATION	protein_coding	-	CCDS35626.1	1	3262	6	16.3	1.5	978.3	0	-4,-5	-	-	18.172	PRINCIPAL:1
ENSMUSG00000026207	Speg	ENSMUST00000113590	ENSMUSP00000109220	TRANSLATION	protein_coding	-	CCDS48292.1	1	861	0	4.87	0.5	269	0	-4,-1	-	-	0	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000122266	ENSMUSP00000113646	TRANSLATION	protein_coding	-	CCDS48293.1	1	113	0	2.6	3.9	76.2	0	-4,-5	-	-	1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000148515	ENSMUSP00000116953	TRANSLATION	protein_coding	stop	-	5	301	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000113589	ENSMUSP00000109219	TRANSLATION	protein_coding	-	CCDS48293.1	2	113	0	2.6	3.9	76.2	0	-4,-5	-	-	1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000132222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026207	Speg	ENSMUST00000143679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026207	Speg	ENSMUST00000132228	ENSMUSP00000121825	TRANSLATION	nonsense_mediated_decay	start	-	2	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000113587	ENSMUSP00000109217	TRANSLATION	protein_coding	-	CCDS48293.1	5	113	0	2.6	3.9	76.2	0	-4,-5	-	-	1	MINOR
ENSMUSG00000026207	Speg	ENSMUST00000113588	ENSMUSP00000109218	TRANSLATION	protein_coding	-	CCDS48293.1	5	113	0	2.6	3.9	76.2	0	-4,-5	-	-	1	MINOR
ENSMUSG00000030768	Disp1	ENSMUST00000194033	ENSMUSP00000141664	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030768	Disp1	ENSMUST00000171366	ENSMUSP00000126742	TRANSLATION	protein_coding	-	CCDS56661.1	1	1521	0	0	0.5	80.4	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030768	Disp1	ENSMUST00000195372	ENSMUSP00000141747	TRANSLATION	protein_coding	-	CCDS56661.1	1	1521	0	0	0.5	80.4	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030768	Disp1	ENSMUST00000003035	ENSMUSP00000003035	TRANSLATION	protein_coding	-	CCDS56661.1	1	1521	0	0	0.5	80.4	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030768	Disp1	ENSMUST00000192915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049866	Arl4c	ENSMUST00000159814	ENSMUSP00000124344	TRANSLATION	protein_coding	-	CCDS15146.1	-	192	18	0.8	20.3	207.5	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000049866	Arl4c	ENSMUST00000187810	ENSMUSP00000139499	TRANSLATION	protein_coding	-	CCDS15146.1	1	192	18	0.8	20.3	207.5	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000049866	Arl4c	ENSMUST00000051236	ENSMUSP00000057085	TRANSLATION	nonsense_mediated_decay	-	-	1	192	18	0.8	20.3	207.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063681	Crb1	ENSMUST00000059825	ENSMUSP00000060769	TRANSLATION	protein_coding	-	CCDS15336.1	1	1405	37	7.03	1.5	567.6	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063681	Crb1	ENSMUST00000199291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063681	Crb1	ENSMUST00000199479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063681	Crb1	ENSMUST00000198445	ENSMUSP00000142552	TRANSLATION	protein_coding	-	-	1	1314	37	5.9	0	564.2	0	-2,-5	-	-	15.534	MINOR
ENSMUSG00000063681	Crb1	ENSMUST00000196402	ENSMUSP00000142702	TRANSLATION	protein_coding	-	-	1	761	37	4.21	0	382.1	0	-2,-5	-	-	6.36	MINOR
ENSMUSG00000063681	Crb1	ENSMUST00000197035	ENSMUSP00000143386	TRANSLATION	nonsense_mediated_decay	start	-	3	46	9	1.528	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063681	Crb1	ENSMUST00000200340	ENSMUSP00000142909	TRANSLATION	nonsense_mediated_decay	start	-	3	100	15	2.15	0	86.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042046	Dstyk	ENSMUST00000188006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042046	Dstyk	ENSMUST00000188973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042046	Dstyk	ENSMUST00000045110	ENSMUSP00000035358	TRANSLATION	protein_coding	-	CCDS15285.1	1	927	21	4.34	6.3	123.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042046	Dstyk	ENSMUST00000187092	ENSMUSP00000140376	TRANSLATION	protein_coding	start/stop	-	3	215	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042046	Dstyk	ENSMUST00000191494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042046	Dstyk	ENSMUST00000188389	ENSMUSP00000139652	TRANSLATION	protein_coding	-	-	5	882	21	3.74	2.4	94.3	0	-4,-5	-	-	15.588	MINOR
ENSMUSG00000026573	Xcl1	ENSMUST00000027860	ENSMUSP00000027860	TRANSLATION	protein_coding	-	CCDS15438.1	1	114	0	2	3.9	47	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000052688	Rab7b	ENSMUST00000064679	ENSMUSP00000065456	TRANSLATION	protein_coding	-	CCDS15272.1	1	199	25	3.95	9.5	163.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000052688	Rab7b	ENSMUST00000064664	ENSMUSP00000066452	TRANSLATION	protein_coding	-	CCDS78677.1	1	157	22	2.95	5.1	129.4	0	-4,-6	-	-	13.398	MINOR
ENSMUSG00000052688	Rab7b	ENSMUST00000129905	ENSMUSP00000116515	TRANSLATION	protein_coding	-	-	2	85	15	1.95	0	46.4	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000052688	Rab7b	ENSMUST00000136247	ENSMUSP00000123359	TRANSLATION	protein_coding	-	-	5	106	15	2.5	0	44	0	-4,-6	-	-	3.102	MINOR
ENSMUSG00000052688	Rab7b	ENSMUST00000130848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026193	Fn1	ENSMUST00000186736	ENSMUSP00000140372	TRANSLATION	protein_coding	stop	-	3	160	0	2.5	0	131.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000187627	ENSMUSP00000140955	TRANSLATION	nonsense_mediated_decay	start	-	5	200	0	3.75	0	96.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186129	ENSMUSP00000141123	TRANSLATION	protein_coding	-	CCDS78609.1	1	2296	5	38.45	1.5	1514.3	0	2,-3	-	-	7.58	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000189160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026193	Fn1	ENSMUST00000188674	ENSMUSP00000140907	TRANSLATION	protein_coding	-	CCDS78610.1	1	2266	5	39.45	1.5	1559.3	0	2,-3	-	-	12.284	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186613	ENSMUSP00000140153	TRANSLATION	nonsense_mediated_decay	start	-	3	71	5	1	0	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000188092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026193	Fn1	ENSMUST00000189821	ENSMUSP00000139702	TRANSLATION	protein_coding	-	CCDS78607.1	1	2176	5	38.45	1.5	1514.3	0	2,-3	-	-	7.58	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000055226	ENSMUSP00000054499	TRANSLATION	protein_coding	-	CCDS15031.1	1	2477	5	40.45	1.5	1604.6	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000026193	Fn1	ENSMUST00000190780	ENSMUSP00000140816	TRANSLATION	protein_coding	-	CCDS78608.1	1	2271	5	38.45	1.5	1514.3	0	2,-3	-	-	7.58	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000188894	ENSMUSP00000140471	TRANSLATION	protein_coding	-	CCDS78612.1	1	2386	5	39.45	1.5	1559.3	0	2,-3	-	-	12.284	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186940	ENSMUSP00000140315	TRANSLATION	protein_coding	-	-	1	383	0	6.91	0	288.3	0	2,-3	-	-	0	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186985	ENSMUSP00000141193	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026193	Fn1	ENSMUST00000187938	ENSMUSP00000140975	TRANSLATION	protein_coding	-	CCDS78611.1	1	2361	5	39.45	1.5	1559.3	0	2,-3	-	-	12.284	MINOR
ENSMUSG00000026193	Fn1	ENSMUST00000186879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026193	Fn1	ENSMUST00000185408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000195745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000195658	ENSMUSP00000141863	TRANSLATION	protein_coding	start/stop	-	3	242	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026608	Kctd3	ENSMUST00000192200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000195787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000085678	ENSMUSP00000082821	TRANSLATION	protein_coding	-	CCDS15608.1	1	815	0	3.7	5.3	79.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026608	Kctd3	ENSMUST00000193273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000193590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026608	Kctd3	ENSMUST00000192458	ENSMUSP00000156175	TRANSLATION	protein_coding	start	-	3	127	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026608	Kctd3	ENSMUST00000193143	ENSMUSP00000141861	TRANSLATION	nonsense_mediated_decay	-	-	5	522	0	3.7	0	79.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026608	Kctd3	ENSMUST00000195488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025900	Rp1	ENSMUST00000027032	ENSMUSP00000027032	TRANSLATION	protein_coding	-	CCDS14804.1	1	2095	0	0.68	0.5	123.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025900	Rp1	ENSMUST00000208660	ENSMUSP00000146439	TRANSLATION	protein_coding	-	-	5	1371	1	4.48	0	488.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025900	Rp1	ENSMUST00000208793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062169	Cnih4	ENSMUST00000134115	ENSMUSP00000115772	TRANSLATION	protein_coding	-	CCDS15582.1	1	139	0	0	15.8	165.5	5	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000062169	Cnih4	ENSMUST00000193907	ENSMUSP00000141442	TRANSLATION	protein_coding	-	-	2	78	0	0	12.1	78.3	3	2,-3	-	-	3.768	MINOR
ENSMUSG00000062169	Cnih4	ENSMUST00000111059	ENSMUSP00000106688	TRANSLATION	protein_coding	-	-	1	92	0	0	2.4	104.7	2	-2,-5	-	-	2.732	MINOR
ENSMUSG00000062169	Cnih4	ENSMUST00000111057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062169	Cnih4	ENSMUST00000075968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073489	Ifi204	ENSMUST00000192414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073489	Ifi204	ENSMUST00000111214	ENSMUSP00000106845	TRANSLATION	protein_coding	-	CCDS35792.1	5	619	0	5.33	0.5	530.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026634	Angel2	ENSMUST00000144693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026634	Angel2	ENSMUST00000137608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026634	Angel2	ENSMUST00000135364	ENSMUSP00000115804	TRANSLATION	protein_coding	stop	-	2	192	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026634	Angel2	ENSMUST00000027947	ENSMUSP00000027947	TRANSLATION	protein_coding	-	CCDS56667.1	1	522	7	2.15	7.5	89.4	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000026634	Angel2	ENSMUST00000146048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026634	Angel2	ENSMUST00000110899	ENSMUSP00000106524	TRANSLATION	protein_coding	-	CCDS56667.1	5	522	7	2.15	7.5	89.4	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000026634	Angel2	ENSMUST00000123384	ENSMUSP00000117912	TRANSLATION	nonsense_mediated_decay	-	-	1	212	5	1.79	0	76.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026634	Angel2	ENSMUST00000134187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026634	Angel2	ENSMUST00000130298	ENSMUSP00000142318	TRANSLATION	nonsense_mediated_decay	-	-	5	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026634	Angel2	ENSMUST00000066632	ENSMUSP00000064556	TRANSLATION	protein_coding	-	CCDS15612.1	1	544	7	2.15	6.5	89.4	0	-4,-2	-	-	20.538	PRINCIPAL:3
ENSMUSG00000026080	Chst10	ENSMUST00000193441	ENSMUSP00000142028	TRANSLATION	protein_coding	-	-	1	196	0	0	0	37.4	4	-4,-7	-	-	0	MINOR
ENSMUSG00000026080	Chst10	ENSMUST00000192175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026080	Chst10	ENSMUST00000194657	ENSMUSP00000141481	TRANSLATION	nonsense_mediated_decay	-	-	1	77	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026080	Chst10	ENSMUST00000195731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026080	Chst10	ENSMUST00000193435	ENSMUSP00000141604	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	4	2,-3	-	-	-1	MINOR
ENSMUSG00000026080	Chst10	ENSMUST00000194361	ENSMUSP00000141295	TRANSLATION	protein_coding	-	-	1	370	0	0	0	175.7	4	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000026080	Chst10	ENSMUST00000027249	ENSMUSP00000027249	TRANSLATION	protein_coding	-	CCDS14901.1	1	374	0	0	1.5	175.7	4	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000026080	Chst10	ENSMUST00000192948	ENSMUSP00000141470	TRANSLATION	nonsense_mediated_decay	start	-	5	242	0	0	0	155.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006546	Cryba2	ENSMUST00000133833	ENSMUSP00000140298	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0.8	0	35.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006546	Cryba2	ENSMUST00000006721	ENSMUSP00000006721	TRANSLATION	protein_coding	-	CCDS15059.1	1	197	0	3.8	5.1	191.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000089872	Rps6kc1	ENSMUST00000162692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089872	Rps6kc1	ENSMUST00000162500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089872	Rps6kc1	ENSMUST00000159823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089872	Rps6kc1	ENSMUST00000159367	ENSMUSP00000124383	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089872	Rps6kc1	ENSMUST00000160891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089872	Rps6kc1	ENSMUST00000159066	ENSMUSP00000124558	TRANSLATION	protein_coding	stop	-	3	131	0	1	0	51.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089872	Rps6kc1	ENSMUST00000160889	ENSMUSP00000123733	TRANSLATION	nonsense_mediated_decay	start	-	1	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089872	Rps6kc1	ENSMUST00000159624	ENSMUSP00000125010	TRANSLATION	nonsense_mediated_decay	-	-	2	336	0	1	0	83.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089872	Rps6kc1	ENSMUST00000061611	ENSMUSP00000061769	TRANSLATION	protein_coding	-	-	5	1056	0	3.95	0.5	197.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067299	Crygd	ENSMUST00000127762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067299	Crygd	ENSMUST00000146122	ENSMUSP00000122528	TRANSLATION	protein_coding	start/stop	-	5	110	3	1	0	99.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067299	Crygd	ENSMUST00000045028	ENSMUSP00000045327	TRANSLATION	protein_coding	-	CCDS35599.1	1	174	3	2	8.8	214.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041439	Mfsd6	ENSMUST00000087701	ENSMUSP00000084991	TRANSLATION	protein_coding	-	CCDS14946.1	1	775	0	0	0.5	308.2	13	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000041439	Mfsd6	ENSMUST00000188126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041439	Mfsd6	ENSMUST00000147758	ENSMUSP00000115398	TRANSLATION	protein_coding	start	-	5	569	0	0	0	231.7	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000041439	Mfsd6	ENSMUST00000149887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041439	Mfsd6	ENSMUST00000147421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041439	Mfsd6	ENSMUST00000156876	ENSMUSP00000122881	TRANSLATION	protein_coding	-	CCDS14945.2	5	794	0	0	1.5	308.2	13	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038421	Fcrla	ENSMUST00000162136	ENSMUSP00000124859	TRANSLATION	protein_coding	stop	-	3	216	0	3.68	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000038421	Fcrla	ENSMUST00000159171	ENSMUSP00000124853	TRANSLATION	protein_coding	-	CCDS48439.1	1	352	0	5.71	0.5	72.7	0	0,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000038421	Fcrla	ENSMUST00000159149	ENSMUSP00000125074	TRANSLATION	nonsense_mediated_decay	start	-	5	177	0	2.68	0	39.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038421	Fcrla	ENSMUST00000046322	ENSMUSP00000036380	TRANSLATION	protein_coding	-	CCDS48440.1	1	353	0	5.71	0.5	72.7	0	0,-4	-	-	12	PRINCIPAL:4
ENSMUSG00000038421	Fcrla	ENSMUST00000161050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038421	Fcrla	ENSMUST00000162887	ENSMUSP00000124469	TRANSLATION	protein_coding	stop	-	2	79	0	1.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042641	Rgsl1	ENSMUST00000206321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042641	Rgsl1	ENSMUST00000185164	ENSMUSP00000139340	TRANSLATION	nonsense_mediated_decay	-	-	5	970	0	0	0	39.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042641	Rgsl1	ENSMUST00000184095	ENSMUSP00000139096	TRANSLATION	nonsense_mediated_decay	start	-	5	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042641	Rgsl1	ENSMUST00000145308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042641	Rgsl1	ENSMUST00000134030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042641	Rgsl1	ENSMUST00000238926	ENSMUSP00000159120	TRANSLATION	protein_coding	-	-	-	1108	0	0	0	39.4	1	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000042641	Rgsl1	ENSMUST00000141249	ENSMUSP00000139215	TRANSLATION	protein_coding	-	-	1	393	0	0	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000042641	Rgsl1	ENSMUST00000124558	ENSMUSP00000135642	TRANSLATION	protein_coding	-	CCDS56645.1	5	1073	0	0	0.5	39.4	1	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000026604	Ptpn14	ENSMUST00000027898	ENSMUSP00000027898	TRANSLATION	protein_coding	-	-	1	849	10	5.4	0	424.9	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000026604	Ptpn14	ENSMUST00000148129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026604	Ptpn14	ENSMUST00000194127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026604	Ptpn14	ENSMUST00000195038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026604	Ptpn14	ENSMUST00000128275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026604	Ptpn14	ENSMUST00000097442	ENSMUSP00000095051	TRANSLATION	protein_coding	-	CCDS15609.1	5	1189	10	5.4	1.5	424.9	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000043019	Edem3	ENSMUST00000059498	ENSMUSP00000058941	TRANSLATION	protein_coding	-	CCDS35736.1	1	931	0	7.73	6.3	430.4	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043019	Edem3	ENSMUST00000187951	ENSMUSP00000140775	TRANSLATION	protein_coding	-	CCDS78701.1	1	913	0	7.73	0.5	430.4	0	-2,-5	-	-	12	MINOR
ENSMUSG00000043019	Edem3	ENSMUST00000188145	ENSMUSP00000140443	TRANSLATION	protein_coding	-	-	5	947	0	7.73	0.5	430.4	0	-2,-5	-	-	12	MINOR
ENSMUSG00000043019	Edem3	ENSMUST00000191070	ENSMUSP00000140234	TRANSLATION	protein_coding	-	CCDS78702.1	1	917	0	7.73	0.5	430.4	0	-2,-5	-	-	12	MINOR
ENSMUSG00000026246	Alppl2	ENSMUST00000190082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026246	Alppl2	ENSMUST00000188310	ENSMUSP00000139887	TRANSLATION	protein_coding	-	CCDS15126.1	1	529	12	10.2	1.5	623.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026246	Alppl2	ENSMUST00000027455	ENSMUSP00000027455	TRANSLATION	protein_coding	-	CCDS15126.1	1	529	12	10.2	1.5	623.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026414	Tnnt2	ENSMUST00000179863	ENSMUSP00000137093	TRANSLATION	protein_coding	-	CCDS48375.1	5	302	0	5.9	0.5	109.7	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000026414	Tnnt2	ENSMUST00000178854	ENSMUSP00000136265	TRANSLATION	protein_coding	-	CCDS48376.1	5	295	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000112087	ENSMUSP00000107717	TRANSLATION	protein_coding	-	CCDS48377.1	5	301	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000189355	ENSMUSP00000139919	TRANSLATION	protein_coding	-	CCDS48378.1	5	291	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000189732	ENSMUSP00000139669	TRANSLATION	protein_coding	-	CCDS48376.1	5	295	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000189826	ENSMUSP00000140807	TRANSLATION	protein_coding	stop	-	5	206	0	2.3	0	79.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026414	Tnnt2	ENSMUST00000188028	ENSMUSP00000140941	TRANSLATION	protein_coding	-	CCDS48375.1	5	302	0	5.9	0.5	109.7	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000026414	Tnnt2	ENSMUST00000191055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026414	Tnnt2	ENSMUST00000186225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026414	Tnnt2	ENSMUST00000178204	ENSMUSP00000137579	TRANSLATION	protein_coding	-	-	5	302	0	5.9	0.5	109.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000112085	ENSMUSP00000107715	TRANSLATION	protein_coding	-	-	5	295	0	5.9	0	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000188098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026414	Tnnt2	ENSMUST00000190451	ENSMUSP00000140282	TRANSLATION	protein_coding	stop	-	5	114	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026414	Tnnt2	ENSMUST00000027671	ENSMUSP00000027671	TRANSLATION	protein_coding	-	CCDS48378.1	5	291	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000026414	Tnnt2	ENSMUST00000112086	ENSMUSP00000107716	TRANSLATION	protein_coding	-	-	5	301	0	5.9	0.5	107.1	0	-4,-5	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000041684	Bivm	ENSMUST00000114709	ENSMUSP00000110357	TRANSLATION	protein_coding	-	CCDS14930.1	1	502	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000041684	Bivm	ENSMUST00000186280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041684	Bivm	ENSMUST00000035991	ENSMUSP00000041964	TRANSLATION	protein_coding	-	CCDS14930.1	1	502	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000041684	Bivm	ENSMUST00000129068	ENSMUSP00000140490	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041684	Bivm	ENSMUST00000138521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041684	Bivm	ENSMUST00000155917	ENSMUSP00000140572	TRANSLATION	protein_coding	stop	-	2	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026034	Clk1	ENSMUST00000135380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000129577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000141570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026034	Clk1	ENSMUST00000034868	ENSMUSP00000034868	TRANSLATION	protein_coding	-	CCDS35577.1	1	483	19	9.33	1.5	181.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026034	Clk1	ENSMUST00000123580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000129303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026034	Clk1	ENSMUST00000139787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026034	Clk1	ENSMUST00000151338	ENSMUSP00000137815	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026034	Clk1	ENSMUST00000131051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000147258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000156931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000186552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026034	Clk1	ENSMUST00000148330	ENSMUSP00000137649	TRANSLATION	nonsense_mediated_decay	-	-	1	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039342	Ankar	ENSMUST00000053499	ENSMUSP00000054056	TRANSLATION	protein_coding	-	CCDS15035.1	1	1465	0	5.18	0.5	24.6	0	-4,-5	-	-	11.802	PRINCIPAL:3
ENSMUSG00000039342	Ankar	ENSMUST00000212710	ENSMUSP00000148555	TRANSLATION	protein_coding	stop	-	5	138	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039342	Ankar	ENSMUST00000211837	ENSMUSP00000148801	TRANSLATION	protein_coding	-	CCDS83554.1	1	1464	0	5.28	0.5	24.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039342	Ankar	ENSMUST00000212573	ENSMUSP00000148640	TRANSLATION	protein_coding	-	-	1	1247	0	5.18	0	24.6	0	-4,-5	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000026028	Trak2	ENSMUST00000173719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026028	Trak2	ENSMUST00000174359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026028	Trak2	ENSMUST00000173590	ENSMUSP00000134499	TRANSLATION	protein_coding	stop	-	2	52	0	0	0	30.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026028	Trak2	ENSMUST00000174120	ENSMUSP00000134253	TRANSLATION	protein_coding	-	-	5	672	0	0	0.5	525.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000026028	Trak2	ENSMUST00000027186	ENSMUSP00000027186	TRANSLATION	protein_coding	-	CCDS14980.1	1	913	0	0	1.5	525.1	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000026028	Trak2	ENSMUST00000172685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042115	Klhdc8a	ENSMUST00000046071	ENSMUSP00000038297	TRANSLATION	protein_coding	-	CCDS35706.1	1	350	0	2.92	9.5	135.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026276	Septin2	ENSMUST00000152476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026276	Septin2	ENSMUST00000149532	ENSMUSP00000115536	TRANSLATION	protein_coding	stop	-	5	120	7	3.08	0	113.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000153826	ENSMUSP00000114614	TRANSLATION	protein_coding	stop	-	5	77	7	1.75	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000157021	ENSMUSP00000134173	TRANSLATION	protein_coding	start	-	2	45	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000027495	ENSMUSP00000027495	TRANSLATION	protein_coding	-	CCDS15190.1	1	361	16	9.9	13.5	424	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026276	Septin2	ENSMUST00000150931	ENSMUSP00000117517	TRANSLATION	protein_coding	stop	-	3	221	16	5.99	0	284.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000131175	ENSMUSP00000120694	TRANSLATION	protein_coding	stop	-	5	212	13	5.66	0	278	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000152778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026276	Septin2	ENSMUST00000129211	ENSMUSP00000120511	TRANSLATION	protein_coding	stop	-	5	213	13	5.66	0	278	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000188923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026276	Septin2	ENSMUST00000112912	ENSMUSP00000108534	TRANSLATION	protein_coding	stop	-	5	221	16	5.99	0	284.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000136182	ENSMUSP00000118621	TRANSLATION	protein_coding	stop	-	2	107	7	2.83	0	146.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026276	Septin2	ENSMUST00000142401	ENSMUSP00000121974	TRANSLATION	protein_coding	stop	-	2	177	7	3.83	0	157.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041763	Tpp2	ENSMUST00000185579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041763	Tpp2	ENSMUST00000187115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041763	Tpp2	ENSMUST00000189388	ENSMUSP00000140562	TRANSLATION	nonsense_mediated_decay	-	-	5	883	3	16.034	0	520.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041763	Tpp2	ENSMUST00000186028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041763	Tpp2	ENSMUST00000186441	ENSMUSP00000139592	TRANSLATION	protein_coding	start/stop	-	3	231	0	3.659	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041763	Tpp2	ENSMUST00000087933	ENSMUSP00000085244	TRANSLATION	protein_coding	-	CCDS14926.1	1	1262	3	19.3274	10.8	631	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000041763	Tpp2	ENSMUST00000188302	ENSMUSP00000140474	TRANSLATION	nonsense_mediated_decay	-	-	1	607	3	10.835	0	373.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041763	Tpp2	ENSMUST00000190401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041763	Tpp2	ENSMUST00000190207	ENSMUSP00000140313	TRANSLATION	protein_coding	start	-	1	298	0	2.335	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041763	Tpp2	ENSMUST00000188313	ENSMUSP00000139918	TRANSLATION	protein_coding	-	CCDS78577.1	1	1249	3	19.3274	10.8	631	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000025937	Lactb2	ENSMUST00000156222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025937	Lactb2	ENSMUST00000027071	ENSMUSP00000027071	TRANSLATION	protein_coding	-	CCDS14823.1	1	288	7	6.25	9.5	65.9	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033671	Cep350	ENSMUST00000146987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033671	Cep350	ENSMUST00000192899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033671	Cep350	ENSMUST00000124495	ENSMUSP00000121043	TRANSLATION	protein_coding	stop	-	1	381	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033671	Cep350	ENSMUST00000129865	ENSMUSP00000148802	TRANSLATION	protein_coding	start/stop	-	5	449	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033671	Cep350	ENSMUST00000132189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033671	Cep350	ENSMUST00000138762	ENSMUSP00000120085	TRANSLATION	protein_coding	-	CCDS48400.1	5	3095	0	0.4	0.5	71.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000118607	AC147806.2	ENSMUST00000113407	ENSMUSP00000159221	TRANSLATION	protein_coding	-	-	2	296	0	0	1.5	0	6	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000118607	AC147806.2	ENSMUST00000239236	ENSMUSP00000159207	TRANSLATION	protein_coding	-	-	-	332	0	0	0.5	0	6	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000025921	Rdh10	ENSMUST00000152626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025921	Rdh10	ENSMUST00000027053	ENSMUSP00000027053	TRANSLATION	protein_coding	-	CCDS14830.1	1	341	28	3.46	12.8	122	0	1,-3	-	-	22	PRINCIPAL:1
ENSMUSG00000025969	Nrp2	ENSMUST00000114157	ENSMUSP00000109794	TRANSLATION	protein_coding	-	CCDS35589.1	1	931	9	11.186	7.5	617.6	2	1,-2	-	-	21	PRINCIPAL:4
ENSMUSG00000025969	Nrp2	ENSMUST00000063594	ENSMUSP00000069379	TRANSLATION	protein_coding	-	CCDS35590.1	1	926	9	11.186	7.5	617.6	2	1,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000025969	Nrp2	ENSMUST00000126344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025969	Nrp2	ENSMUST00000114155	ENSMUSP00000109792	TRANSLATION	protein_coding	-	CCDS35593.1	1	901	9	11.186	7.5	485	0	1,-2	-	-	15	MINOR
ENSMUSG00000025969	Nrp2	ENSMUST00000027112	ENSMUSP00000027112	TRANSLATION	protein_coding	-	CCDS35592.1	1	906	9	11.186	7.5	485	0	1,-2	-	-	15	MINOR
ENSMUSG00000025969	Nrp2	ENSMUST00000075144	ENSMUSP00000074642	TRANSLATION	protein_coding	-	CCDS14995.1	1	914	9	11.186	1.5	617.6	2	1,-2	-	-	18.231	MINOR
ENSMUSG00000025969	Nrp2	ENSMUST00000102822	ENSMUSP00000099886	TRANSLATION	protein_coding	-	CCDS35591.1	1	909	9	11.186	2.7	617.6	2	1,-2	-	-	18.786	MINOR
ENSMUSG00000026251	Chrnd	ENSMUST00000186373	ENSMUSP00000139537	TRANSLATION	protein_coding	-	-	1	411	0	7.78	0	380.9	4	-4,-5	-	-	1.32	MINOR
ENSMUSG00000026251	Chrnd	ENSMUST00000073252	ENSMUSP00000072983	TRANSLATION	protein_coding	-	CCDS15129.1	1	520	0	10.27	5.1	475.9	4	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026251	Chrnd	ENSMUST00000189970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051528	Olfr424	ENSMUST00000214751	ENSMUSP00000150840	TRANSLATION	protein_coding	-	CCDS15538.1	5	315	0	0.4	2.7	209.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051528	Olfr424	ENSMUST00000053941	ENSMUSP00000054305	TRANSLATION	protein_coding	-	CCDS15538.1	-	315	0	0.4	2.7	209.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026149	Tm4sf20	ENSMUST00000138787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026149	Tm4sf20	ENSMUST00000027331	ENSMUSP00000027331	TRANSLATION	protein_coding	-	CCDS15099.1	1	226	0	0	1.5	204.9	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073602	Serpinb3b	ENSMUST00000086694	ENSMUSP00000083901	TRANSLATION	protein_coding	-	CCDS15216.1	1	387	0	6.35	1.5	450	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073602	Serpinb3b	ENSMUST00000166100	ENSMUSP00000132370	TRANSLATION	protein_coding	-	CCDS15216.1	1	387	0	6.35	1.5	450	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040612	Ildr2	ENSMUST00000193860	ENSMUSP00000141323	TRANSLATION	protein_coding	-	-	1	553	0	0	0	0	1	-2,-6	-	-	0	MINOR
ENSMUSG00000040612	Ildr2	ENSMUST00000111416	ENSMUSP00000107047	TRANSLATION	protein_coding	-	CCDS48431.1	1	661	0	0	0.5	82	2	-2,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000040612	Ildr2	ENSMUST00000192732	ENSMUSP00000141502	TRANSLATION	protein_coding	-	-	1	534	0	0	0.5	0	1	-2,-6	-	-	0	MINOR
ENSMUSG00000040612	Ildr2	ENSMUST00000192426	ENSMUSP00000141961	TRANSLATION	protein_coding	-	-	1	201	0	0	0	0	1	-2,-6	-	-	0	MINOR
ENSMUSG00000040612	Ildr2	ENSMUST00000192638	ENSMUSP00000142311	TRANSLATION	protein_coding	-	-	1	642	0	0	0.5	82	2	-2,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000040612	Ildr2	ENSMUST00000194964	ENSMUSP00000142152	TRANSLATION	protein_coding	-	-	1	602	0	0	0.5	82	2	-2,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000040612	Ildr2	ENSMUST00000195557	ENSMUSP00000142240	TRANSLATION	protein_coding	-	-	1	427	0	0	0	82	2	-2,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000066671	Olfr220	ENSMUST00000085861	ENSMUSP00000083023	TRANSLATION	protein_coding	-	CCDS48458.1	-	325	0	0.36	2.7	172.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066671	Olfr220	ENSMUST00000194229	ENSMUSP00000141919	TRANSLATION	protein_coding	-	CCDS48458.1	3	325	0	0.36	2.7	172.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050122	Vwa3b	ENSMUST00000238425	ENSMUSP00000158584	TRANSLATION	nonsense_mediated_decay	-	-	-	1240	5	0	0	165.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000169057	ENSMUSP00000132886	TRANSLATION	protein_coding	-	-	5	153	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000194320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050122	Vwa3b	ENSMUST00000238500	ENSMUSP00000158743	TRANSLATION	protein_coding	-	-	-	1221	5	0	0	165.9	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000050122	Vwa3b	ENSMUST00000124404	ENSMUSP00000141690	TRANSLATION	non_stop_decay	stop	-	1	336	0	0	0	8.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000117172	ENSMUSP00000114022	TRANSLATION	protein_coding	-	-	2	343	0	0	0	8.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000194048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050122	Vwa3b	ENSMUST00000162449	ENSMUSP00000125460	TRANSLATION	protein_coding	-	-	1	343	0	0	0	8.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000194890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050122	Vwa3b	ENSMUST00000027289	ENSMUSP00000027289	TRANSLATION	nonsense_mediated_decay	-	-	5	736	5	0	0	56.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000067178	ENSMUSP00000069700	TRANSLATION	protein_coding	-	-	2	343	0	0	0	8.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050122	Vwa3b	ENSMUST00000195450	ENSMUSP00000142139	TRANSLATION	protein_coding	start	-	5	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033007	Asic4	ENSMUST00000037708	ENSMUSP00000045598	TRANSLATION	protein_coding	-	CCDS15073.1	1	539	0	6.37	1.5	328.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033007	Asic4	ENSMUST00000113577	ENSMUSP00000109207	TRANSLATION	protein_coding	-	-	5	520	0	5.87	0	316.2	1	-4,-5	-	-	10.236	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000195196	ENSMUSP00000141870	TRANSLATION	protein_coding	stop	-	5	105	2	2.33	0	83.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000194636	ENSMUSP00000141316	TRANSLATION	protein_coding	start	-	3	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000193610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039748	Exo1	ENSMUST00000193822	ENSMUSP00000141624	TRANSLATION	protein_coding	stop	-	5	191	8	4.58	0	128	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000194306	ENSMUSP00000141770	TRANSLATION	protein_coding	stop	-	3	223	7	5.25	0	164.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000193858	ENSMUSP00000141568	TRANSLATION	protein_coding	stop	-	5	189	8	4.25	0	128	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000192378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039748	Exo1	ENSMUST00000039725	ENSMUSP00000039376	TRANSLATION	protein_coding	-	CCDS15551.1	1	837	9	8.18	0.5	171.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039748	Exo1	ENSMUST00000194816	ENSMUSP00000142091	TRANSLATION	protein_coding	start	-	3	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039748	Exo1	ENSMUST00000191680	ENSMUSP00000141526	TRANSLATION	protein_coding	start/stop	-	3	246	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067773	Defb41	ENSMUST00000088463	ENSMUSP00000085811	TRANSLATION	protein_coding	-	CCDS48226.1	1	62	0	0	4.1	0	0	3,-2	-	-	1.128	MINOR
ENSMUSG00000067773	Defb41	ENSMUST00000097817	ENSMUSP00000095426	TRANSLATION	protein_coding	-	CCDS35521.1	1	65	0	0	6.5	30	0	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000073730	Ppp1r14bl	ENSMUST00000073179	ENSMUSP00000072920	TRANSLATION	protein_coding	-	CCDS48231.1	-	153	0	0.6	0.5	102.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026035	Ppil3	ENSMUST00000114345	ENSMUSP00000109984	TRANSLATION	protein_coding	-	CCDS35580.1	1	120	9	3.58	0.5	146.4	0	-4,-5	-	-	14.262	MINOR
ENSMUSG00000026035	Ppil3	ENSMUST00000114348	ENSMUSP00000109988	TRANSLATION	protein_coding	-	CCDS35579.1	1	161	9	4.58	19.5	175.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026035	Ppil3	ENSMUST00000117069	ENSMUSP00000112947	TRANSLATION	protein_coding	-	CCDS35579.1	1	161	9	4.58	19.5	175.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026035	Ppil3	ENSMUST00000188896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026035	Ppil3	ENSMUST00000186242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026035	Ppil3	ENSMUST00000124550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026035	Ppil3	ENSMUST00000081677	ENSMUSP00000080378	TRANSLATION	protein_coding	-	CCDS35579.1	1	161	9	4.58	19.5	175.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026035	Ppil3	ENSMUST00000185990	ENSMUSP00000139979	TRANSLATION	protein_coding	stop	-	3	90	5	2.83	0	92.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026035	Ppil3	ENSMUST00000190048	ENSMUSP00000139617	TRANSLATION	protein_coding	stop	-	3	91	5	2.83	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036907	C1ql2	ENSMUST00000037286	ENSMUSP00000037257	TRANSLATION	protein_coding	-	CCDS15233.1	1	287	0	1.8	7.5	127	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000033793	Atp6v1h	ENSMUST00000194301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033793	Atp6v1h	ENSMUST00000194978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033793	Atp6v1h	ENSMUST00000192698	ENSMUSP00000141797	TRANSLATION	protein_coding	-	CCDS78541.1	5	465	0	3.04	10	352.1	0	-4,-5	-	-	13.132	MINOR
ENSMUSG00000033793	Atp6v1h	ENSMUST00000192847	ENSMUSP00000141636	TRANSLATION	protein_coding	-	-	5	441	0	2.04	1	368.5	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000033793	Atp6v1h	ENSMUST00000192029	ENSMUSP00000141440	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033793	Atp6v1h	ENSMUST00000044369	ENSMUSP00000040756	TRANSLATION	protein_coding	-	CCDS14808.1	1	483	0	3.04	18	347.8	0	-4,-5	-	-	14.758	PRINCIPAL:1
ENSMUSG00000033793	Atp6v1h	ENSMUST00000192142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033793	Atp6v1h	ENSMUST00000194676	ENSMUSP00000141264	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	122.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047496	Rnf152	ENSMUST00000058688	ENSMUSP00000050103	TRANSLATION	protein_coding	-	CCDS15204.1	1	203	8	0.4	14.8	31.9	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047496	Rnf152	ENSMUST00000172299	ENSMUSP00000128632	TRANSLATION	protein_coding	-	CCDS15204.1	2	203	8	0.4	14.8	31.9	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026179	Pnkd	ENSMUST00000027370	ENSMUSP00000027370	TRANSLATION	protein_coding	-	CCDS35613.1	1	385	11	5.7	7.5	113.3	0	-4,0	-	-	16.938	PRINCIPAL:2
ENSMUSG00000026179	Pnkd	ENSMUST00000087225	ENSMUSP00000084477	TRANSLATION	protein_coding	-	CCDS15045.1	1	360	11	5.7	2.7	113.3	1	2,-2	-	-	14.724	MINOR
ENSMUSG00000026179	Pnkd	ENSMUST00000190398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026179	Pnkd	ENSMUST00000113805	ENSMUSP00000109436	TRANSLATION	protein_coding	-	CCDS35614.1	1	142	0	0	6.3	71.4	1	-4,0	-	-	2.445	MINOR
ENSMUSG00000026179	Pnkd	ENSMUST00000138620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026179	Pnkd	ENSMUST00000087226	ENSMUSP00000084478	TRANSLATION	protein_coding	-	-	1	424	11	5.7	0	181	1	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000026179	Pnkd	ENSMUST00000129219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026179	Pnkd	ENSMUST00000152492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026253	Chrng	ENSMUST00000027470	ENSMUSP00000027470	TRANSLATION	protein_coding	-	CCDS35651.1	1	519	0	10.05	7.5	438.8	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026253	Chrng	ENSMUST00000185763	ENSMUSP00000139600	TRANSLATION	protein_coding	stop	-	1	255	0	4.53	0	187.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026253	Chrng	ENSMUST00000189392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026253	Chrng	ENSMUST00000188796	ENSMUSP00000140796	TRANSLATION	protein_coding	stop	-	1	146	0	3.65	0	113.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026253	Chrng	ENSMUST00000186038	ENSMUSP00000141001	TRANSLATION	protein_coding	stop	-	1	220	0	4.25	0	206.2	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000026009	Icos	ENSMUST00000027162	ENSMUSP00000027162	TRANSLATION	protein_coding	-	-	1	223	0	0.48	0	186.8	1	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000026009	Icos	ENSMUST00000102827	ENSMUSP00000099891	TRANSLATION	protein_coding	-	CCDS14994.1	1	200	0	0.48	1.5	186.8	1	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000026407	Cacna1s	ENSMUST00000161700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026407	Cacna1s	ENSMUST00000161865	ENSMUSP00000125262	TRANSLATION	protein_coding	start	-	5	1507	4	34.35	0	938.5	16	-4,-6	-	-	-1	MINOR
ENSMUSG00000026407	Cacna1s	ENSMUST00000112068	ENSMUSP00000107699	TRANSLATION	protein_coding	-	CCDS48380.1	1	1831	4	41.08	0.5	1116.4	19	-4,-6	-	-	14.998	ALTERNATIVE:2
ENSMUSG00000026407	Cacna1s	ENSMUST00000159106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026407	Cacna1s	ENSMUST00000112064	ENSMUSP00000107695	TRANSLATION	protein_coding	-	CCDS35724.1	2	1852	4	41.58	1.5	1114.8	19	-4,-6	-	-	15.904	PRINCIPAL:3
ENSMUSG00000026407	Cacna1s	ENSMUST00000160641	ENSMUSP00000125278	TRANSLATION	protein_coding	-	-	5	1850	4	41.58	1.5	1114.6	19	-4,-6	-	-	15.892	ALTERNATIVE:2
ENSMUSG00000004552	Ctse	ENSMUST00000112411	ENSMUSP00000108030	TRANSLATION	protein_coding	-	-	5	364	5	6.7	1	398.5	0	3,-2	-	-	11.96	MINOR
ENSMUSG00000004552	Ctse	ENSMUST00000141061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004552	Ctse	ENSMUST00000073350	ENSMUSP00000073072	TRANSLATION	protein_coding	-	CCDS15271.1	1	397	5	7.7	1.5	449.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000057173	Rfx8	ENSMUST00000126760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057173	Rfx8	ENSMUST00000151913	ENSMUSP00000121212	TRANSLATION	protein_coding	-	CCDS48245.1	1	596	0	2	0.5	98.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079429	Mroh2a	ENSMUST00000113130	ENSMUSP00000108755	TRANSLATION	protein_coding	-	CCDS69921.1	5	1671	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000079429	Mroh2a	ENSMUST00000135948	ENSMUSP00000118971	TRANSLATION	protein_coding	start	-	3	174	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079429	Mroh2a	ENSMUST00000061013	ENSMUSP00000130508	TRANSLATION	protein_coding	-	-	5	1679	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000079429	Mroh2a	ENSMUST00000142632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079429	Mroh2a	ENSMUST00000148474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079445	B3gnt7	ENSMUST00000189618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079445	B3gnt7	ENSMUST00000188695	ENSMUSP00000140392	TRANSLATION	protein_coding	stop	-	1	155	0	0	0	106	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079445	B3gnt7	ENSMUST00000113306	ENSMUSP00000108931	TRANSLATION	protein_coding	-	CCDS35645.1	1	397	0	0	2.7	164.2	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000026630	Batf3	ENSMUST00000193771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026630	Batf3	ENSMUST00000191621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026630	Batf3	ENSMUST00000027943	ENSMUSP00000027943	TRANSLATION	protein_coding	-	CCDS15615.1	1	118	0	1.2	5.2	41.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026630	Batf3	ENSMUST00000192268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026630	Batf3	ENSMUST00000194833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100679	Gm28778	ENSMUST00000190734	ENSMUSP00000141087	TRANSLATION	protein_coding,RT	stop	-	3	233	0	1.4	0	180.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000047021	Cfap65	ENSMUST00000130489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047021	Cfap65	ENSMUST00000094844	ENSMUSP00000092440	TRANSLATION	protein_coding	-	CCDS15060.1	1	1847	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000047021	Cfap65	ENSMUST00000139950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006542	Prkag3	ENSMUST00000188073	ENSMUSP00000139909	TRANSLATION	protein_coding	-	CCDS15055.1	1	489	41	7.11	3.9	104.7	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000006542	Prkag3	ENSMUST00000159728	ENSMUSP00000124979	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006542	Prkag3	ENSMUST00000113672	ENSMUSP00000109302	TRANSLATION	protein_coding	-	-	1	464	41	7.11	0	104.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000006542	Prkag3	ENSMUST00000160732	ENSMUSP00000125344	TRANSLATION	nonsense_mediated_decay	-	-	1	489	41	7.11	3.9	104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006542	Prkag3	ENSMUST00000162093	ENSMUSP00000125242	TRANSLATION	nonsense_mediated_decay	-	-	5	268	5	1.516	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006542	Prkag3	ENSMUST00000081636	ENSMUSP00000080342	TRANSLATION	protein_coding	-	CCDS15055.1	1	489	41	7.11	3.9	104.7	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000055980	Irs1	ENSMUST00000069799	ENSMUSP00000063795	TRANSLATION	protein_coding	-	CCDS15096.1	1	1231	0	0.6	0.5	145.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000003135	Cnot11	ENSMUST00000160145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003135	Cnot11	ENSMUST00000161515	ENSMUSP00000125638	TRANSLATION	protein_coding	-	CCDS14906.1	1	505	0	0	1.5	184.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000003135	Cnot11	ENSMUST00000003219	ENSMUSP00000003219	TRANSLATION	protein_coding	-	CCDS14906.1	1	505	0	0	1.5	184.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000003135	Cnot11	ENSMUST00000195567	ENSMUSP00000141388	TRANSLATION	protein_coding	start	-	5	149	0	0	0	151.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026167	Wnt10a	ENSMUST00000006718	ENSMUSP00000006718	TRANSLATION	protein_coding	-	CCDS15057.1	1	417	0	1.29	6.3	396.5	0	-2,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000026167	Wnt10a	ENSMUST00000187238	ENSMUSP00000139656	TRANSLATION	protein_coding	start	-	5	96	0	0.28	0	59.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000087236	Kif28	ENSMUST00000223392	ENSMUSP00000152522	TRANSLATION	protein_coding	start/stop	-	5	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000087236	Kif28	ENSMUST00000211943	ENSMUSP00000148289	TRANSLATION	protein_coding	-	-	5	880	11	6.85	0	381.3	0	-4,-7	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000087236	Kif28	ENSMUST00000221136	ENSMUSP00000152770	TRANSLATION	protein_coding	-	-	5	1034	11	7.25	1.5	381.3	0	-4,-7	-	-	18	PRINCIPAL:5
ENSMUSG00000087236	Kif28	ENSMUST00000131716	ENSMUSP00000118935	TRANSLATION	protein_coding	-	-	5	1030	11	7.25	0	381.3	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000090071	Cdk5r2	ENSMUST00000160379	ENSMUSP00000125322	TRANSLATION	protein_coding	-	CCDS48290.1	-	369	0	0.8	1.5	299.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000141512	ENSMUSP00000139635	TRANSLATION	nonsense_mediated_decay	-	-	2	227	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000141339	ENSMUSP00000121311	TRANSLATION	protein_coding	start	-	1	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000179089	ENSMUSP00000137287	TRANSLATION	protein_coding	-	-	1	446	0	0	1.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000150870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000137824	ENSMUSP00000117421	TRANSLATION	protein_coding	-	CCDS48219.1	1	462	0	0	1.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000191437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000171690	ENSMUSP00000132334	TRANSLATION	protein_coding	-	CCDS48218.1	5	288	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000048613	ENSMUSP00000043857	TRANSLATION	protein_coding	-	CCDS35513.1	1	459	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000142117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057715	A830018L16Rik	ENSMUST00000135014	ENSMUSP00000119143	TRANSLATION	protein_coding	-	CCDS48220.1	1	287	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000026468	Lhx4	ENSMUST00000195275	ENSMUSP00000141662	TRANSLATION	protein_coding	stop	-	5	223	10	3.35	0	136	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026468	Lhx4	ENSMUST00000027740	ENSMUSP00000027740	TRANSLATION	protein_coding	-	CCDS48399.1	1	390	16	4.5	10.6	190.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015843	Rxrg	ENSMUST00000111380	ENSMUSP00000107011	TRANSLATION	protein_coding	-	CCDS48435.1	1	340	28	7.75	7.5	239.7	0	-4,-5	-	-	12.159	MINOR
ENSMUSG00000015843	Rxrg	ENSMUST00000111384	ENSMUSP00000107015	TRANSLATION	protein_coding	-	CCDS15459.1	5	463	28	8.92	8.8	364.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015843	Rxrg	ENSMUST00000111386	ENSMUSP00000107017	TRANSLATION	protein_coding	-	CCDS15459.1	5	463	28	8.92	8.8	364.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015843	Rxrg	ENSMUST00000015987	ENSMUSP00000015987	TRANSLATION	protein_coding	-	CCDS15459.1	1	463	28	8.92	8.8	364.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000037503	Fam168b	ENSMUST00000191307	ENSMUSP00000140573	TRANSLATION	protein_coding	-	CCDS48236.1	2	206	0	0	1.5	369.4	0	-4,-5	-	-	6.124	MINOR
ENSMUSG00000037503	Fam168b	ENSMUST00000170092	ENSMUSP00000128676	TRANSLATION	protein_coding	-	CCDS48235.1	5	201	0	0	1.5	351.2	0	-4,-5	-	-	5.032	MINOR
ENSMUSG00000037503	Fam168b	ENSMUST00000185469	ENSMUSP00000141150	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037503	Fam168b	ENSMUST00000185231	ENSMUSP00000139456	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	84.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037503	Fam168b	ENSMUST00000185279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037503	Fam168b	ENSMUST00000140534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037503	Fam168b	ENSMUST00000047534	ENSMUSP00000042212	TRANSLATION	protein_coding	-	CCDS14873.1	1	194	0	0	17	362.7	0	-4,-5	-	-	9.598	PRINCIPAL:1
ENSMUSG00000037503	Fam168b	ENSMUST00000167518	ENSMUSP00000131720	TRANSLATION	protein_coding	-	CCDS48236.1	5	206	0	0	1.5	369.4	0	-4,-5	-	-	6.124	MINOR
ENSMUSG00000037529	Prss40	ENSMUST00000047840	ENSMUSP00000045118	TRANSLATION	protein_coding	-	CCDS14870.1	1	365	7	3.73	0.5	193.1	0	-1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000037529	Prss40	ENSMUST00000115071	ENSMUSP00000110723	TRANSLATION	nonsense_mediated_decay	-	-	1	133	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000037529	Prss40	ENSMUST00000190790	ENSMUSP00000140885	TRANSLATION	protein_coding	start	-	1	147	1	1.73	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000161743	ENSMUSP00000123905	TRANSLATION	protein_coding	stop	-	3	71	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000159914	ENSMUSP00000123720	TRANSLATION	protein_coding	stop	-	2	105	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000159591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026489	Coq8a	ENSMUST00000161379	ENSMUSP00000141262	TRANSLATION	protein_coding	stop	-	1	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000160879	ENSMUSP00000141948	TRANSLATION	protein_coding	-	-	5	111	0	1.27	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000161632	ENSMUSP00000124481	TRANSLATION	nonsense_mediated_decay	start	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000160121	ENSMUSP00000124208	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000162725	ENSMUSP00000125024	TRANSLATION	protein_coding	stop	-	2	108	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000170472	ENSMUSP00000128290	TRANSLATION	protein_coding	-	CCDS15566.1	1	645	0	10.85	1.5	111.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026489	Coq8a	ENSMUST00000161746	ENSMUSP00000125269	TRANSLATION	protein_coding	stop	-	1	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000160482	ENSMUSP00000124329	TRANSLATION	protein_coding	stop	-	2	130	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000160102	ENSMUSP00000124289	TRANSLATION	nonsense_mediated_decay	-	-	2	70	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000161814	ENSMUSP00000125071	TRANSLATION	protein_coding	stop	-	3	117	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000027766	ENSMUSP00000027766	TRANSLATION	protein_coding	-	CCDS15566.1	1	645	0	10.85	1.5	111.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026489	Coq8a	ENSMUST00000162769	ENSMUSP00000141998	TRANSLATION	protein_coding	stop	-	5	60	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000161300	ENSMUSP00000125002	TRANSLATION	protein_coding	start	-	5	401	0	9.08	0	51.3	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000026489	Coq8a	ENSMUST00000160169	ENSMUSP00000125089	TRANSLATION	nonsense_mediated_decay	-	-	5	139	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026563	Tada1	ENSMUST00000027846	ENSMUSP00000027846	TRANSLATION	protein_coding	-	CCDS15450.1	1	335	0	0	14.8	93.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026563	Tada1	ENSMUST00000132817	ENSMUSP00000122172	TRANSLATION	nonsense_mediated_decay	-	-	2	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026563	Tada1	ENSMUST00000138148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026563	Tada1	ENSMUST00000138284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060715	1700019A02Rik	ENSMUST00000072235	ENSMUSP00000072089	TRANSLATION	protein_coding	-	CCDS48258.1	1	146	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000060715	1700019A02Rik	ENSMUST00000190748	ENSMUSP00000139938	TRANSLATION	protein_coding	-	-	3	146	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000051079	Rgs13	ENSMUST00000052375	ENSMUSP00000058813	TRANSLATION	protein_coding	-	CCDS15348.1	1	158	0	2.75	6.3	117.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051079	Rgs13	ENSMUST00000111941	ENSMUSP00000107572	TRANSLATION	protein_coding	-	CCDS15348.1	1	158	0	2.75	6.3	117.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000015316	Slamf1	ENSMUST00000015460	ENSMUSP00000015460	TRANSLATION	protein_coding	-	CCDS15502.1	1	343	0	2.31	0.5	198.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015316	Slamf1	ENSMUST00000163992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058017	Serpinb3d	ENSMUST00000023861	ENSMUSP00000023861	TRANSLATION	protein_coding	-	CCDS15215.1	1	387	0	6.3	1.5	429.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079180	Mptx2	ENSMUST00000111224	ENSMUSP00000106855	TRANSLATION	protein_coding	-	CCDS56658.1	5	219	9	1.15	1.5	241.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000041040	Fam117b	ENSMUST00000189790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041040	Fam117b	ENSMUST00000151630	ENSMUSP00000138042	TRANSLATION	nonsense_mediated_decay	start	-	2	84	0	0	0	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041040	Fam117b	ENSMUST00000036540	ENSMUSP00000041671	TRANSLATION	protein_coding	-	CCDS14986.1	1	584	0	0	0.5	406.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000026678	Rgs5	ENSMUST00000027997	ENSMUSP00000027997	TRANSLATION	protein_coding	-	CCDS15464.1	1	181	0	3.89	19.5	121	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026678	Rgs5	ENSMUST00000152809	ENSMUSP00000141496	TRANSLATION	protein_coding	-	CCDS83629.1	2	74	0	1.89	0.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000073678	Pgap1	ENSMUST00000189506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073678	Pgap1	ENSMUST00000187949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073678	Pgap1	ENSMUST00000185817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073678	Pgap1	ENSMUST00000097739	ENSMUSP00000095346	TRANSLATION	protein_coding	-	CCDS48260.1	5	922	4	0	7.5	270.4	0	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000114591	Gm47996	ENSMUST00000224757	ENSMUSP00000153493	TRANSLATION	protein_coding	-	-	-	300	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042686	Jph1	ENSMUST00000186024	ENSMUSP00000140705	TRANSLATION	nonsense_mediated_decay	start	-	5	136	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000042686	Jph1	ENSMUST00000038382	ENSMUSP00000039072	TRANSLATION	protein_coding	-	CCDS14833.1	1	660	0	0	1.5	155.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033364	Usp37	ENSMUST00000044260	ENSMUSP00000035445	TRANSLATION	protein_coding	-	CCDS78616.1	5	957	4	8.465	6.3	398.5	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000033364	Usp37	ENSMUST00000188012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033364	Usp37	ENSMUST00000191058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033364	Usp37	ENSMUST00000189257	ENSMUSP00000140670	TRANSLATION	protein_coding	-	CCDS15050.1	1	979	4	8.465	6.3	398.2	0	-4,-5	-	-	17.982	PRINCIPAL:3
ENSMUSG00000033364	Usp37	ENSMUST00000187590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033364	Usp37	ENSMUST00000186282	ENSMUSP00000140158	TRANSLATION	protein_coding	stop	-	3	22	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033364	Usp37	ENSMUST00000190592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033722	BC034090	ENSMUST00000187096	ENSMUSP00000140632	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	143.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033722	BC034090	ENSMUST00000185937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033722	BC034090	ENSMUST00000188492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033722	BC034090	ENSMUST00000190976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033722	BC034090	ENSMUST00000187781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033722	BC034090	ENSMUST00000186551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033722	BC034090	ENSMUST00000186156	ENSMUSP00000139623	TRANSLATION	protein_coding	-	-	5	1202	0	0	0.5	208.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000033722	BC034090	ENSMUST00000186082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033722	BC034090	ENSMUST00000035914	ENSMUSP00000037456	TRANSLATION	protein_coding	-	-	1	840	0	0	0.5	171.9	0	-4,-2	-	-	3.804	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000188593	ENSMUSP00000140881	TRANSLATION	protein_coding	start	-	5	75	6	1.66	0	67.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000190717	ENSMUSP00000141097	TRANSLATION	protein_coding	stop	-	3	89	5	2.08	0	70.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000186758	ENSMUSP00000140552	TRANSLATION	protein_coding	stop	-	3	100	5	2.41	0	86.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000186213	ENSMUSP00000140657	TRANSLATION	protein_coding	-	CCDS35623.1	1	448	26	5.73	17.5	399.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026202	Tuba4a	ENSMUST00000186971	ENSMUSP00000140321	TRANSLATION	protein_coding	start	-	2	125	10	3.268	0	114	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000189131	ENSMUSP00000140970	TRANSLATION	protein_coding	stop	-	3	81	1	1.75	0	59.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026202	Tuba4a	ENSMUST00000187103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026202	Tuba4a	ENSMUST00000079464	ENSMUSP00000078429	TRANSLATION	protein_coding	start	-	1	477	26	5.73	0	399.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000160908	ENSMUSP00000125444	TRANSLATION	protein_coding	-	CCDS48430.1	1	769	0	4	0.5	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000111427	ENSMUSP00000107056	TRANSLATION	protein_coding	-	CCDS35761.1	2	782	0	4	0.5	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000176942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026565	Pou2f1	ENSMUST00000176101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026565	Pou2f1	ENSMUST00000177472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026565	Pou2f1	ENSMUST00000027850	ENSMUSP00000027850	TRANSLATION	protein_coding	-	-	5	706	0	4	0	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000176800	ENSMUSP00000135329	TRANSLATION	protein_coding	stop	-	1	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000194366	ENSMUSP00000141618	TRANSLATION	protein_coding	start/stop	-	1	74	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000176004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026565	Pou2f1	ENSMUST00000069609	ENSMUSP00000064000	TRANSLATION	protein_coding	-	CCDS15444.1	1	758	0	4	0.5	190.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026565	Pou2f1	ENSMUST00000184799	ENSMUSP00000139271	TRANSLATION	protein_coding	start	-	1	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000177358	ENSMUSP00000135565	TRANSLATION	protein_coding	stop	-	3	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000160260	ENSMUSP00000124738	TRANSLATION	protein_coding	-	CCDS35760.1	1	793	0	4	0.5	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000111429	ENSMUSP00000107057	TRANSLATION	protein_coding	-	-	5	746	0	4	0.5	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000082225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026565	Pou2f1	ENSMUST00000184643	ENSMUSP00000138962	TRANSLATION	protein_coding	-	-	1	701	0	4	0	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026565	Pou2f1	ENSMUST00000159212	ENSMUSP00000125371	TRANSLATION	protein_coding	start	-	5	580	0	4	0	190.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026565	Pou2f1	ENSMUST00000111426	ENSMUSP00000107055	TRANSLATION	protein_coding	-	-	5	758	0	4	0	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026426	Arl8a	ENSMUST00000123344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026426	Arl8a	ENSMUST00000141177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026426	Arl8a	ENSMUST00000027684	ENSMUSP00000027684	TRANSLATION	protein_coding	-	CCDS15316.1	1	186	21	5.5	18.2	156.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000026426	Arl8a	ENSMUST00000125774	ENSMUSP00000121545	TRANSLATION	protein_coding	start	-	3	165	21	4.92	0	132.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058729	Lin9	ENSMUST00000192725	ENSMUSP00000141503	TRANSLATION	protein_coding	start	-	5	518	0	0	0	160.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058729	Lin9	ENSMUST00000193892	ENSMUSP00000141530	TRANSLATION	nonsense_mediated_decay	-	-	1	272	0	0	0	160.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058729	Lin9	ENSMUST00000191744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058729	Lin9	ENSMUST00000194847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058729	Lin9	ENSMUST00000085804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058729	Lin9	ENSMUST00000194373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058729	Lin9	ENSMUST00000194638	ENSMUSP00000142096	TRANSLATION	nonsense_mediated_decay	start	-	5	73	0	0	0	56.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058729	Lin9	ENSMUST00000192561	ENSMUSP00000141331	TRANSLATION	protein_coding	-	CCDS48468.2	1	558	0	0	10.4	160.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000058729	Lin9	ENSMUST00000193162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000544	Gpa33	ENSMUST00000027847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000544	Gpa33	ENSMUST00000060833	ENSMUSP00000060147	TRANSLATION	protein_coding	-	CCDS15447.1	1	319	0	3.52	1.5	107.7	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000544	Gpa33	ENSMUST00000166860	ENSMUSP00000125903	TRANSLATION	protein_coding	-	CCDS15447.1	1	319	0	3.52	1.5	107.7	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000544	Gpa33	ENSMUST00000166159	ENSMUSP00000132753	TRANSLATION	protein_coding	stop	-	5	36	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056536	Pign	ENSMUST00000187909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056536	Pign	ENSMUST00000190811	ENSMUSP00000140844	TRANSLATION	protein_coding	-	-	1	798	6	2.5	0	329.5	18	1,-3	-	-	12	MINOR
ENSMUSG00000056536	Pign	ENSMUST00000191408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056536	Pign	ENSMUST00000187537	ENSMUSP00000140020	TRANSLATION	protein_coding	-	-	5	826	6	2.5	0.5	330.6	19	1,-3	-	-	12	MINOR
ENSMUSG00000056536	Pign	ENSMUST00000190945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056536	Pign	ENSMUST00000070699	ENSMUSP00000069969	TRANSLATION	protein_coding	-	CCDS15205.1	5	931	6	2.5	2.7	500.3	22	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000056536	Pign	ENSMUST00000186195	ENSMUSP00000139490	TRANSLATION	protein_coding	start	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056536	Pign	ENSMUST00000190139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056536	Pign	ENSMUST00000185983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056536	Pign	ENSMUST00000186485	ENSMUSP00000139638	TRANSLATION	protein_coding	-	CCDS15205.1	1	931	6	2.5	2.7	500.3	22	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000056536	Pign	ENSMUST00000185209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056536	Pign	ENSMUST00000188858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050217	Lgsn	ENSMUST00000161773	ENSMUSP00000140063	TRANSLATION	protein_coding	start	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050217	Lgsn	ENSMUST00000062560	ENSMUSP00000059871	TRANSLATION	protein_coding	-	CCDS14859.1	1	563	0	1.64	1.5	256.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039377	Hlx	ENSMUST00000174257	ENSMUSP00000134728	TRANSLATION	protein_coding	start	-	2	196	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039377	Hlx	ENSMUST00000048572	ENSMUSP00000040505	TRANSLATION	protein_coding	-	CCDS15593.1	1	476	0	1.6	1.5	69.6	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000005886	Ncoa2	ENSMUST00000146784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000068304	ENSMUSP00000069509	TRANSLATION	protein_coding	-	CCDS35514.1	5	1393	0	5.445	5.1	618.1	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000005886	Ncoa2	ENSMUST00000147927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000139970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000143603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000133232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000145280	ENSMUSP00000116641	TRANSLATION	protein_coding	stop	-	3	114	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005886	Ncoa2	ENSMUST00000124088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005886	Ncoa2	ENSMUST00000006037	ENSMUSP00000006037	TRANSLATION	protein_coding	-	CCDS35515.1	1	1462	0	5.445	5.1	618.1	0	-4,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000005886	Ncoa2	ENSMUST00000081713	ENSMUSP00000080413	TRANSLATION	protein_coding	-	CCDS35514.1	1	1393	0	5.445	5.1	618.1	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000005886	Ncoa2	ENSMUST00000185275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026365	Cfh	ENSMUST00000123238	ENSMUSP00000115166	TRANSLATION	nonsense_mediated_decay	-	-	1	1110	0	18.45	0	500.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026365	Cfh	ENSMUST00000194688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026365	Cfh	ENSMUST00000066859	ENSMUSP00000066677	TRANSLATION	protein_coding	-	-	1	1234	0	20.45	1	540.9	0	3,-2	-	-	11.52	ALTERNATIVE:2
ENSMUSG00000026365	Cfh	ENSMUST00000192880	ENSMUSP00000141209	TRANSLATION	protein_coding	-	-	5	707	0	12.29	0	301.8	0	-2,-6	-	-	0	MINOR
ENSMUSG00000026365	Cfh	ENSMUST00000111976	ENSMUSP00000107607	TRANSLATION	protein_coding	-	CCDS48388.1	1	1252	0	20.69	0.5	540.9	0	-2,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000026365	Cfh	ENSMUST00000148225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026365	Cfh	ENSMUST00000111977	ENSMUSP00000107608	TRANSLATION	protein_coding	-	-	1	1195	0	19.69	0	507.6	0	-2,-6	-	-	8.004	MINOR
ENSMUSG00000026365	Cfh	ENSMUST00000192919	ENSMUSP00000141634	TRANSLATION	protein_coding	start	-	5	837	0	13.8	0	358.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041872	Il17f	ENSMUST00000189301	ENSMUSP00000140122	TRANSLATION	protein_coding	stop	-	3	156	0	1.8	0	101.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000041872	Il17f	ENSMUST00000191111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041872	Il17f	ENSMUST00000190692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041872	Il17f	ENSMUST00000039046	ENSMUSP00000046960	TRANSLATION	protein_coding	-	CCDS35522.1	1	161	0	1.8	1.5	101.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000064341	ENSMUSP00000066587	TRANSLATION	protein_coding	-	CCDS15109.1	1	263	0	0	0.5	130.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000161267	ENSMUSP00000124435	TRANSLATION	protein_coding	-	-	3	119	0	0	0	124.7	0	-4,-5	-	-	5.64	MINOR
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000093506	ENSMUSP00000091224	TRANSLATION	protein_coding	-	CCDS35636.1	1	291	0	0	0.5	130.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000162421	ENSMUSP00000125215	TRANSLATION	protein_coding	-	-	1	135	0	0	0	124.7	0	-4,-5	-	-	5.64	MINOR
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000161685	ENSMUSP00000125170	TRANSLATION	protein_coding	start	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000159114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052477	C130026I21Rik	ENSMUST00000159582	ENSMUSP00000125160	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	130.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042251	Pm20d1	ENSMUST00000132450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042251	Pm20d1	ENSMUST00000152989	ENSMUSP00000116936	TRANSLATION	protein_coding	start	-	3	99	1	1.06	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042251	Pm20d1	ENSMUST00000112393	ENSMUSP00000108012	TRANSLATION	protein_coding	-	CCDS15274.1	1	503	6	5.395	1.5	175.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000042251	Pm20d1	ENSMUST00000048660	ENSMUSP00000046079	TRANSLATION	protein_coding	-	CCDS15274.1	1	503	6	5.395	1.5	175.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000049605	Olfr418	ENSMUST00000059754	ENSMUSP00000052418	TRANSLATION	protein_coding	-	CCDS15526.1	-	310	0	0.2	6.4	185	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000049605	Olfr418	ENSMUST00000213420	ENSMUSP00000150427	TRANSLATION	protein_coding	-	CCDS15526.1	5	310	0	0.2	6.4	185	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073664	Nbeal1	ENSMUST00000035569	ENSMUSP00000049393	TRANSLATION	protein_coding	start/stop	-	5	1179	0	10.812	0	917.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073664	Nbeal1	ENSMUST00000162291	ENSMUSP00000125592	TRANSLATION	nonsense_mediated_decay	start	-	1	734	0	1.818	0	491.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073664	Nbeal1	ENSMUST00000187195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073664	Nbeal1	ENSMUST00000160980	ENSMUSP00000125147	TRANSLATION	protein_coding	start/stop	-	3	376	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073664	Nbeal1	ENSMUST00000188450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073664	Nbeal1	ENSMUST00000190958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073664	Nbeal1	ENSMUST00000185984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073664	Nbeal1	ENSMUST00000159344	ENSMUSP00000124850	TRANSLATION	protein_coding	start/stop	-	5	246	0	5.598	0	293.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073664	Nbeal1	ENSMUST00000185573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073664	Nbeal1	ENSMUST00000160834	ENSMUSP00000124056	TRANSLATION	protein_coding	-	CCDS48274.1	5	2688	0	11.732	1.5	1051.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026159	Agfg1	ENSMUST00000186043	ENSMUSP00000140678	TRANSLATION	protein_coding	stop	-	5	200	0	2.5	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026159	Agfg1	ENSMUST00000190052	ENSMUSP00000141157	TRANSLATION	protein_coding	-	CCDS83564.1	5	537	4	4	4.2	98.5	0	-4,-5	-	-	17.455	MINOR
ENSMUSG00000026159	Agfg1	ENSMUST00000186302	ENSMUSP00000140785	TRANSLATION	protein_coding	-	-	5	561	4	4	7.6	98.5	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000026159	Agfg1	ENSMUST00000063380	ENSMUSP00000070250	TRANSLATION	protein_coding	-	-	1	540	4	4	0	98.5	0	-4,-5	-	-	16	MINOR
ENSMUSG00000026159	Agfg1	ENSMUST00000189220	ENSMUSP00000140170	TRANSLATION	protein_coding	-	CCDS15100.1	1	559	4	4	7.6	98.5	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000026159	Agfg1	ENSMUST00000187899	ENSMUSP00000139503	TRANSLATION	protein_coding	-	-	5	521	4	4	5.4	98.5	0	-4,-5	-	-	18.001	ALTERNATIVE:1
ENSMUSG00000026159	Agfg1	ENSMUST00000113444	ENSMUSP00000109071	TRANSLATION	protein_coding	-	CCDS78634.1	1	530	4	4	0.5	98.5	0	-4,-5	-	-	16	MINOR
ENSMUSG00000026159	Agfg1	ENSMUST00000190046	ENSMUSP00000140473	TRANSLATION	protein_coding	start	-	5	580	4	4	0	98.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056050	Mia3	ENSMUST00000195233	ENSMUSP00000141853	TRANSLATION	protein_coding	stop	-	5	233	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000056050	Mia3	ENSMUST00000069922	ENSMUSP00000064801	TRANSLATION	protein_coding	start	-	1	852	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000056050	Mia3	ENSMUST00000109158	ENSMUSP00000104786	TRANSLATION	protein_coding	-	-	5	781	0	0	0	0	2	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000056050	Mia3	ENSMUST00000192090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056050	Mia3	ENSMUST00000194543	ENSMUSP00000141268	TRANSLATION	protein_coding	stop	-	1	1008	0	1.7	0	30.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000010311	Optc	ENSMUST00000126123	ENSMUSP00000117086	TRANSLATION	protein_coding	start	-	1	300	0	2.16	0	56.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010311	Optc	ENSMUST00000149380	ENSMUSP00000115661	TRANSLATION	protein_coding	-	CCDS48366.1	1	328	0	2.56	0.5	10.9	0	-4,-7	-	-	5.556	MINOR
ENSMUSG00000010311	Optc	ENSMUST00000153617	ENSMUSP00000123262	TRANSLATION	protein_coding	-	CCDS48366.1	1	328	0	2.56	0.5	10.9	0	-4,-7	-	-	5.556	MINOR
ENSMUSG00000010311	Optc	ENSMUST00000124051	ENSMUSP00000120568	TRANSLATION	protein_coding	-	CCDS15299.2	1	381	0	3.36	0.5	56.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010311	Optc	ENSMUST00000124245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041144	Dnah7b	ENSMUST00000190792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041144	Dnah7b	ENSMUST00000238212	ENSMUSP00000158612	TRANSLATION	protein_coding	-	-	-	4024	64	29.28	0.5	2674.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041144	Dnah7b	ENSMUST00000185879	ENSMUSP00000139723	TRANSLATION	nonsense_mediated_decay	start	-	3	24	0	0.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041144	Dnah7b	ENSMUST00000069293	ENSMUSP00000068738	TRANSLATION	protein_coding	-	CCDS48253.1	5	4068	64	29.28	0.5	2674.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000041144	Dnah7b	ENSMUST00000188209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041144	Dnah7b	ENSMUST00000187548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041144	Dnah7b	ENSMUST00000185557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026272	Agxt	ENSMUST00000027491	ENSMUSP00000027491	TRANSLATION	protein_coding	-	CCDS15184.1	1	414	13	10	5.1	211.5	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000026272	Agxt	ENSMUST00000190603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026272	Agxt	ENSMUST00000191039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038936	Sccpdh	ENSMUST00000040538	ENSMUSP00000040956	TRANSLATION	protein_coding	-	CCDS15563.1	1	429	21	0	6.3	117.9	3	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038936	Sccpdh	ENSMUST00000143936	ENSMUSP00000115769	TRANSLATION	protein_coding	start	-	3	120	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000038936	Sccpdh	ENSMUST00000131039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038936	Sccpdh	ENSMUST00000134287	ENSMUSP00000136880	TRANSLATION	nonsense_mediated_decay	-	-	5	130	16	0	0	78.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038936	Sccpdh	ENSMUST00000192611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038936	Sccpdh	ENSMUST00000144480	ENSMUSP00000121285	TRANSLATION	protein_coding	start	-	3	170	0	0	0	28.4	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000102416	4933424G06Rik	ENSMUST00000192873	ENSMUSP00000147230	TRANSLATION	protein_coding	stop	-	5	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102416	4933424G06Rik	ENSMUST00000193459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102416	4933424G06Rik	ENSMUST00000208994	ENSMUSP00000146900	TRANSLATION	protein_coding	-	-	1	267	0	0	0	0	0	-1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000102416	4933424G06Rik	ENSMUST00000195374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051344	Plekhm3	ENSMUST00000134097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051344	Plekhm3	ENSMUST00000139649	ENSMUSP00000138002	TRANSLATION	nonsense_mediated_decay	-	-	1	761	14	0	5.1	263	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051344	Plekhm3	ENSMUST00000187188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051344	Plekhm3	ENSMUST00000140857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051344	Plekhm3	ENSMUST00000097713	ENSMUSP00000095320	TRANSLATION	protein_coding	-	CCDS15009.1	1	761	14	0	5.1	263	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051344	Plekhm3	ENSMUST00000123225	ENSMUSP00000120872	TRANSLATION	protein_coding	stop	-	2	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025940	Tmem70	ENSMUST00000177501	ENSMUSP00000135483	TRANSLATION	protein_coding	-	CCDS35518.1	1	254	0	0	0.5	183.3	2	-2,2	-	-	6	PRINCIPAL:3
ENSMUSG00000025940	Tmem70	ENSMUST00000177532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025940	Tmem70	ENSMUST00000065373	ENSMUSP00000070497	TRANSLATION	protein_coding	-	CCDS56623.1	1	253	0	0	0.5	183.3	2	-2,2	-	-	6	ALTERNATIVE:2
ENSMUSG00000025940	Tmem70	ENSMUST00000176451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026102	Inpp1	ENSMUST00000177279	ENSMUSP00000135225	TRANSLATION	nonsense_mediated_decay	-	-	5	110	1	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026102	Inpp1	ENSMUST00000159725	ENSMUSP00000123977	TRANSLATION	protein_coding	stop	-	3	80	1	1.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026102	Inpp1	ENSMUST00000027271	ENSMUSP00000027271	TRANSLATION	protein_coding	-	CCDS14947.1	1	396	9	5.58	5.1	194.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000026102	Inpp1	ENSMUST00000159607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026102	Inpp1	ENSMUST00000162351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026102	Inpp1	ENSMUST00000162576	ENSMUSP00000124890	TRANSLATION	protein_coding	stop	-	5	90	2	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026698	Pigc	ENSMUST00000028021	ENSMUSP00000028021	TRANSLATION	protein_coding	-	CCDS15419.1	1	297	0	0	9.5	293.1	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026698	Pigc	ENSMUST00000193784	ENSMUSP00000141646	TRANSLATION	protein_coding	-	CCDS15419.1	-	297	0	0	9.5	293.1	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026698	Pigc	ENSMUST00000159648	ENSMUSP00000125562	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026698	Pigc	ENSMUST00000111594	ENSMUSP00000107221	TRANSLATION	protein_coding	-	CCDS15419.1	1	297	0	0	9.5	293.1	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026698	Pigc	ENSMUST00000160881	ENSMUSP00000125321	TRANSLATION	protein_coding	stop	-	2	140	0	0	0	129.5	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000057464	Olfr1415	ENSMUST00000071521	ENSMUSP00000084047	TRANSLATION	protein_coding	-	CCDS15169.1	-	311	0	0.9	7.5	180.7	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057464	Olfr1415	ENSMUST00000204766	ENSMUSP00000144986	TRANSLATION	protein_coding	-	-	3	71	0	0.6	0	0	2	-3,-5	-	-	4.002	MINOR
ENSMUSG00000057464	Olfr1415	ENSMUST00000204009	ENSMUSP00000145446	TRANSLATION	protein_coding	-	CCDS15169.1	3	311	0	0.9	7.5	180.7	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026078	Pdcl3	ENSMUST00000193073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026078	Pdcl3	ENSMUST00000193489	ENSMUSP00000141258	TRANSLATION	nonsense_mediated_decay	-	-	5	88	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026078	Pdcl3	ENSMUST00000027247	ENSMUSP00000027247	TRANSLATION	protein_coding	-	CCDS14903.1	1	240	0	4	9.6	63.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026078	Pdcl3	ENSMUST00000194552	ENSMUSP00000142151	TRANSLATION	protein_coding	stop	-	5	97	0	2.2	0	42.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057329	Bcl2	ENSMUST00000112751	ENSMUSP00000108371	TRANSLATION	protein_coding	-	CCDS15209.1	1	236	0	1.6	3.9	163.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000057329	Bcl2	ENSMUST00000189999	ENSMUSP00000139856	TRANSLATION	protein_coding	-	CCDS78667.1	-	199	0	1.198	1.7	163.1	0	-4,-5	-	-	10.735	MINOR
ENSMUSG00000037318	Traf3ip3	ENSMUST00000159805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037318	Traf3ip3	ENSMUST00000160332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037318	Traf3ip3	ENSMUST00000192020	ENSMUSP00000141698	TRANSLATION	protein_coding	-	CCDS15634.1	5	513	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000037318	Traf3ip3	ENSMUST00000194278	ENSMUSP00000141661	TRANSLATION	nonsense_mediated_decay	-	-	5	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037318	Traf3ip3	ENSMUST00000161151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037318	Traf3ip3	ENSMUST00000162480	ENSMUSP00000141669	TRANSLATION	protein_coding	start	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037318	Traf3ip3	ENSMUST00000162905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037318	Traf3ip3	ENSMUST00000161367	ENSMUSP00000141358	TRANSLATION	protein_coding	start/stop	-	3	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037318	Traf3ip3	ENSMUST00000043550	ENSMUSP00000040977	TRANSLATION	protein_coding	-	CCDS15634.1	1	513	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000037318	Traf3ip3	ENSMUST00000160302	ENSMUSP00000142321	TRANSLATION	protein_coding	start	-	2	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037318	Traf3ip3	ENSMUST00000161145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037318	Traf3ip3	ENSMUST00000161403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037318	Traf3ip3	ENSMUST00000159666	ENSMUSP00000141938	TRANSLATION	protein_coding	start	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042474	Fcmr	ENSMUST00000149355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042474	Fcmr	ENSMUST00000038829	ENSMUSP00000048303	TRANSLATION	protein_coding	-	CCDS15261.1	1	422	0	0.64	0.5	38.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042474	Fcmr	ENSMUST00000126821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042474	Fcmr	ENSMUST00000145446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001674	Ddx18	ENSMUST00000001724	ENSMUSP00000001724	TRANSLATION	protein_coding	-	CCDS15240.1	1	660	14	8.24	0.5	307.2	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000001674	Ddx18	ENSMUST00000134417	ENSMUSP00000114149	TRANSLATION	protein_coding	start/stop	-	5	171	1	3.6	0	87.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001674	Ddx18	ENSMUST00000148809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001674	Ddx18	ENSMUST00000131471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037509	Arhgef4	ENSMUST00000162599	ENSMUSP00000124906	TRANSLATION	protein_coding	start	-	5	628	0	9.78	0	163.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037509	Arhgef4	ENSMUST00000159747	ENSMUSP00000124213	TRANSLATION	protein_coding	-	-	5	1855	0	10.78	0	239.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000037509	Arhgef4	ENSMUST00000047664	ENSMUSP00000035980	TRANSLATION	protein_coding	-	CCDS14872.1	1	484	0	9.28	3.9	235.9	0	-4,-5	-	-	9.784	MINOR
ENSMUSG00000037509	Arhgef4	ENSMUST00000159021	ENSMUSP00000124467	TRANSLATION	protein_coding	stop	-	5	273	0	5.25	0	129.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037509	Arhgef4	ENSMUST00000162760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037509	Arhgef4	ENSMUST00000159059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037509	Arhgef4	ENSMUST00000160855	ENSMUSP00000124207	TRANSLATION	nonsense_mediated_decay	-	-	1	216	0	3.27	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045210	Vcpip1	ENSMUST00000057438	ENSMUSP00000051248	TRANSLATION	protein_coding	-	CCDS14814.1	1	1220	0	0	0.5	44.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044340	Phlpp1	ENSMUST00000061047	ENSMUSP00000056530	TRANSLATION	protein_coding	-	CCDS48337.1	1	1687	0	8.645	0.5	177.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044340	Phlpp1	ENSMUST00000124895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044340	Phlpp1	ENSMUST00000135810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003134	Tbc1d8	ENSMUST00000192531	ENSMUSP00000142143	TRANSLATION	nonsense_mediated_decay	-	-	5	156	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003134	Tbc1d8	ENSMUST00000195854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003134	Tbc1d8	ENSMUST00000054462	ENSMUSP00000049967	TRANSLATION	protein_coding	-	CCDS14905.1	1	1134	3	3	1.5	299.2	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000003134	Tbc1d8	ENSMUST00000192099	ENSMUSP00000141257	TRANSLATION	nonsense_mediated_decay	start	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003134	Tbc1d8	ENSMUST00000193823	ENSMUSP00000141750	TRANSLATION	protein_coding	-	-	1	1006	3	3	0	299.2	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000037035	Inhbb	ENSMUST00000038765	ENSMUSP00000044918	TRANSLATION	protein_coding	-	CCDS15224.1	1	411	0	1.2	5.1	137.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000090145	Ugt1a6b	ENSMUST00000113138	ENSMUSP00000108763	TRANSLATION	protein_coding	-	CCDS48313.1	5	531	18	3.14	1.5	762.1	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000090145	Ugt1a6b	ENSMUST00000113137	ENSMUSP00000108762	TRANSLATION	protein_coding	-	CCDS48313.1	3	531	18	3.14	1.5	762.1	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000067081	Asb18	ENSMUST00000238685	ENSMUSP00000158643	TRANSLATION	protein_coding	-	-	-	438	0	3.89	0	131.1	0	-4,-6	-	-	11.28	MINOR
ENSMUSG00000067081	Asb18	ENSMUST00000154228	ENSMUSP00000117767	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	1.66	0	42.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067081	Asb18	ENSMUST00000151330	ENSMUSP00000117836	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067081	Asb18	ENSMUST00000097656	ENSMUSP00000095261	TRANSLATION	protein_coding	-	-	5	203	0	2.69	0	52	0	-4,-5	-	-	4.134	MINOR
ENSMUSG00000067081	Asb18	ENSMUST00000086882	ENSMUSP00000084095	TRANSLATION	protein_coding	-	CCDS15151.1	1	467	0	4.25	3.9	115.1	0	-4,-5	-	-	12.04	PRINCIPAL:1
ENSMUSG00000026409	Pfkfb2	ENSMUST00000191347	ENSMUSP00000140698	TRANSLATION	protein_coding	-	-	5	556	25	13.87	0	347	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026409	Pfkfb2	ENSMUST00000186867	ENSMUSP00000140068	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000191301	ENSMUSP00000140995	TRANSLATION	nonsense_mediated_decay	-	-	1	196	11	5.3	0	225.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000050406	ENSMUSP00000133073	TRANSLATION	protein_coding	-	CCDS48349.1	1	497	25	12.88	0.5	347	0	-4,-5	-	-	16.02	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000187522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026409	Pfkfb2	ENSMUST00000066863	ENSMUSP00000066426	TRANSLATION	protein_coding	-	CCDS35701.1	1	518	25	13.63	1.8	347	0	-4,-5	-	-	17.52	PRINCIPAL:2
ENSMUSG00000026409	Pfkfb2	ENSMUST00000171479	ENSMUSP00000129747	TRANSLATION	protein_coding	-	CCDS48350.1	1	473	25	12.87	0.5	347	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000185233	ENSMUSP00000140551	TRANSLATION	nonsense_mediated_decay	-	-	1	518	25	13.63	1.8	347	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000187089	ENSMUSP00000140612	TRANSLATION	protein_coding	-	-	5	533	25	13.87	0	347	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026409	Pfkfb2	ENSMUST00000189534	ENSMUSP00000140355	TRANSLATION	protein_coding	-	CCDS48350.1	1	473	25	12.87	0.5	347	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000169659	ENSMUSP00000127587	TRANSLATION	protein_coding	-	CCDS35701.1	1	518	25	13.63	1.8	347	0	-4,-5	-	-	17.52	PRINCIPAL:2
ENSMUSG00000026409	Pfkfb2	ENSMUST00000189167	ENSMUSP00000140984	TRANSLATION	protein_coding	-	-	1	374	21	10.05	0	347	0	-4,-5	-	-	9.336	MINOR
ENSMUSG00000026409	Pfkfb2	ENSMUST00000186777	ENSMUSP00000140799	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033276	Stk36	ENSMUST00000087186	ENSMUSP00000084433	TRANSLATION	protein_coding	-	-	1	1188	19	6.48	0	289.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000033276	Stk36	ENSMUST00000155473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033276	Stk36	ENSMUST00000157007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033276	Stk36	ENSMUST00000087183	ENSMUSP00000084430	TRANSLATION	protein_coding	-	CCDS35619.1	5	1316	19	6.48	5.1	289.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033276	Stk36	ENSMUST00000145673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033276	Stk36	ENSMUST00000189830	ENSMUSP00000140912	TRANSLATION	nonsense_mediated_decay	-	-	3	79	6	1.35	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033276	Stk36	ENSMUST00000113694	ENSMUSP00000109324	TRANSLATION	protein_coding	-	-	1	145	19	3.7	0	156.6	0	-4,-5	-	-	6.438	MINOR
ENSMUSG00000033276	Stk36	ENSMUST00000148456	ENSMUSP00000120020	TRANSLATION	protein_coding	stop	-	1	1048	19	6.48	0	254.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033276	Stk36	ENSMUST00000123154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042305	Tmem183a	ENSMUST00000191237	ENSMUSP00000139821	TRANSLATION	nonsense_mediated_decay	-	-	5	235	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042305	Tmem183a	ENSMUST00000049470	ENSMUSP00000046786	TRANSLATION	protein_coding	-	CCDS35714.1	1	375	0	0	7.5	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000042305	Tmem183a	ENSMUST00000189572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042305	Tmem183a	ENSMUST00000188205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042305	Tmem183a	ENSMUST00000185903	ENSMUSP00000141012	TRANSLATION	protein_coding	start/stop	-	3	111	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000052062	Pard3b	ENSMUST00000138768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052062	Pard3b	ENSMUST00000094906	ENSMUSP00000092510	TRANSLATION	protein_coding	-	-	5	1104	0	6.2	0	246.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000052062	Pard3b	ENSMUST00000046673	ENSMUSP00000040439	TRANSLATION	protein_coding	-	-	5	1141	0	5.2	0	202.3	0	-4,-7	-	-	7.362	MINOR
ENSMUSG00000052062	Pard3b	ENSMUST00000188325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052062	Pard3b	ENSMUST00000129030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052062	Pard3b	ENSMUST00000075374	ENSMUSP00000074837	TRANSLATION	protein_coding	-	CCDS48276.1	5	1203	0	6.2	1.5	246.3	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000042229	Rabif	ENSMUST00000047978	ENSMUSP00000038335	TRANSLATION	protein_coding	-	CCDS15310.1	1	123	4	2	6.4	115.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061518	Cox5b	ENSMUST00000191790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061518	Cox5b	ENSMUST00000192859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061518	Cox5b	ENSMUST00000081180	ENSMUSP00000079944	TRANSLATION	protein_coding	-	-	5	85	0	1.83	0	41.6	0	-2,2	-	-	2.106	MINOR
ENSMUSG00000061518	Cox5b	ENSMUST00000193210	ENSMUSP00000141554	TRANSLATION	protein_coding	-	CCDS14886.1	1	129	4	4.08	9.6	131.5	0	-2,2	-	-	19	PRINCIPAL:1
ENSMUSG00000061518	Cox5b	ENSMUST00000193235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061518	Cox5b	ENSMUST00000195151	ENSMUSP00000141224	TRANSLATION	protein_coding	start	-	3	98	0	1.5	0	40.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033159	Cnppd1	ENSMUST00000168720	ENSMUSP00000132688	TRANSLATION	protein_coding	-	CCDS15063.1	1	407	0	1.07	3.9	0	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033159	Cnppd1	ENSMUST00000189403	ENSMUSP00000141062	TRANSLATION	protein_coding	stop	-	2	170	0	1.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033159	Cnppd1	ENSMUST00000190679	ENSMUSP00000140289	TRANSLATION	protein_coding	-	CCDS15063.1	1	407	0	1.07	3.9	0	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033159	Cnppd1	ENSMUST00000041213	ENSMUSP00000044799	TRANSLATION	protein_coding	-	CCDS15063.1	1	407	0	1.07	3.9	0	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033159	Cnppd1	ENSMUST00000189809	ENSMUSP00000140262	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033159	Cnppd1	ENSMUST00000188037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033159	Cnppd1	ENSMUST00000187888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033159	Cnppd1	ENSMUST00000189043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032769	Trpa1	ENSMUST00000041447	ENSMUSP00000043594	TRANSLATION	protein_coding	-	CCDS35516.1	1	1125	0	25.55	1.5	255.1	6	-4,-7	-	-	11.538	PRINCIPAL:1
ENSMUSG00000032769	Trpa1	ENSMUST00000235071	ENSMUSP00000157371	TRANSLATION	protein_coding	-	-	-	1095	0	24.55	0.5	262.8	5	-4,-7	-	-	10.002	MINOR
ENSMUSG00000034066	Farp2	ENSMUST00000120301	ENSMUSP00000112725	TRANSLATION	protein_coding	-	CCDS15191.1	1	1065	0	18.95	0.5	488.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034066	Farp2	ENSMUST00000122402	ENSMUSP00000113790	TRANSLATION	protein_coding	-	-	1	795	0	6.54	0	266.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000062310	Glrp1	ENSMUST00000067625	ENSMUSP00000063883	TRANSLATION	protein_coding	-	CCDS35661.1	1	174	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000026525	Opn3	ENSMUST00000027809	ENSMUSP00000027809	TRANSLATION	protein_coding	-	CCDS15549.1	1	400	13	1.88	3.9	120.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000057072	Spata45	ENSMUST00000077889	ENSMUSP00000077049	TRANSLATION	protein_coding	-	CCDS48483.1	2	97	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000057072	Spata45	ENSMUST00000192151	ENSMUSP00000141721	TRANSLATION	protein_coding	-	CCDS48483.1	5	97	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000072295	C2cd6	ENSMUST00000238601	ENSMUSP00000158810	TRANSLATION	protein_coding	-	-	-	724	0	0	0	588.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000072295	C2cd6	ENSMUST00000149784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072295	C2cd6	ENSMUST00000097080	ENSMUSP00000094845	TRANSLATION	protein_coding	-	CCDS14982.2	2	557	0	0	0.5	588.1	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000072295	C2cd6	ENSMUST00000238949	ENSMUSP00000159118	TRANSLATION	protein_coding	-	-	-	2282	0	0	0	588.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000056220	Pla2g4a	ENSMUST00000190507	ENSMUSP00000139851	TRANSLATION	protein_coding	stop	-	2	149	8	3.5	0	57.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056220	Pla2g4a	ENSMUST00000142040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056220	Pla2g4a	ENSMUST00000070200	ENSMUSP00000070868	TRANSLATION	protein_coding	-	CCDS15352.1	1	748	12	15.33	10.8	542.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056220	Pla2g4a	ENSMUST00000134676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056220	Pla2g4a	ENSMUST00000111926	ENSMUSP00000107557	TRANSLATION	protein_coding	-	CCDS78700.1	1	740	12	15	2.5	542.1	0	-4,-5	-	-	17.799	MINOR
ENSMUSG00000056220	Pla2g4a	ENSMUST00000155438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102976	Zc3h11a	ENSMUST00000191896	ENSMUSP00000141255	TRANSLATION	protein_coding	-	CCDS15297.1	1	792	12	0	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000102976	Zc3h11a	ENSMUST00000192148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102976	Zc3h11a	ENSMUST00000195669	ENSMUSP00000142009	TRANSLATION	protein_coding	start/stop	-	3	194	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000102976	Zc3h11a	ENSMUST00000191705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102976	Zc3h11a	ENSMUST00000191828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102976	Zc3h11a	ENSMUST00000195067	ENSMUSP00000141825	TRANSLATION	protein_coding	stop	-	3	40	5	0	0	84.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102976	Zc3h11a	ENSMUST00000192107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102976	Zc3h11a	ENSMUST00000194668	ENSMUSP00000141727	TRANSLATION	protein_coding	stop	-	3	133	12	0	0	192.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102976	Zc3h11a	ENSMUST00000192775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102976	Zc3h11a	ENSMUST00000193504	ENSMUSP00000141895	TRANSLATION	protein_coding	stop	-	2	84	12	0	0	169	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102976	Zc3h11a	ENSMUST00000195424	ENSMUSP00000142066	TRANSLATION	protein_coding,RT	stop	-	5	189	12	0	0	192.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102976	Zc3h11a	ENSMUST00000191932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026640	Plxna2	ENSMUST00000124785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026640	Plxna2	ENSMUST00000027952	ENSMUSP00000027952	TRANSLATION	protein_coding	-	CCDS35827.1	1	1894	0	30.3	5.1	1312	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000026640	Plxna2	ENSMUST00000135664	ENSMUSP00000118087	TRANSLATION	nonsense_mediated_decay	start	-	5	83	0	1	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026640	Plxna2	ENSMUST00000125381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026640	Plxna2	ENSMUST00000194398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042197	Zfp451	ENSMUST00000130376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042197	Zfp451	ENSMUST00000125723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042197	Zfp451	ENSMUST00000019861	ENSMUSP00000019861	TRANSLATION	protein_coding	-	CCDS14865.1	1	1056	41	1.91	0.5	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000042197	Zfp451	ENSMUST00000139143	ENSMUSP00000137992	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	1.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042197	Zfp451	ENSMUST00000115167	ENSMUSP00000110821	TRANSLATION	protein_coding	start/stop	-	3	224	9	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042197	Zfp451	ENSMUST00000194656	ENSMUSP00000141813	TRANSLATION	protein_coding	stop	-	5	244	10	1.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042197	Zfp451	ENSMUST00000140163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042197	Zfp451	ENSMUST00000044455	ENSMUSP00000044372	TRANSLATION	protein_coding	-	CCDS69873.1	1	559	0	1.91	5.3	34.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042197	Zfp451	ENSMUST00000151055	ENSMUSP00000141714	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026135	Zfp142	ENSMUST00000156613	ENSMUSP00000138085	TRANSLATION	nonsense_mediated_decay	-	-	5	219	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026135	Zfp142	ENSMUST00000027315	ENSMUSP00000027315	TRANSLATION	protein_coding	-	CCDS78619.1	1	1843	122	2.4	0.5	98.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026135	Zfp142	ENSMUST00000147011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026135	Zfp142	ENSMUST00000130112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026135	Zfp142	ENSMUST00000127921	ENSMUSP00000137908	TRANSLATION	nonsense_mediated_decay	-	-	1	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026135	Zfp142	ENSMUST00000066986	ENSMUSP00000065149	TRANSLATION	protein_coding	-	-	5	1642	107	2.4	0.5	98.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000026135	Zfp142	ENSMUST00000113737	ENSMUSP00000109366	TRANSLATION	protein_coding	-	CCDS35618.1	1	1740	115	2.4	0.5	98.8	0	-4,-5	-	-	13.332	MINOR
ENSMUSG00000026135	Zfp142	ENSMUST00000136865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026229	Psmd1	ENSMUST00000147807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026229	Psmd1	ENSMUST00000143200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026229	Psmd1	ENSMUST00000127104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026229	Psmd1	ENSMUST00000027432	ENSMUSP00000027432	TRANSLATION	protein_coding	-	CCDS15117.1	1	953	0	21.58	11.7	127.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026229	Psmd1	ENSMUST00000133480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026229	Psmd1	ENSMUST00000149946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026229	Psmd1	ENSMUST00000189234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026229	Psmd1	ENSMUST00000139715	ENSMUSP00000122121	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026229	Psmd1	ENSMUST00000152184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026073	Il1r2	ENSMUST00000191671	ENSMUSP00000141882	TRANSLATION	protein_coding	stop	-	3	183	0	2.55	0	22.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026073	Il1r2	ENSMUST00000195770	ENSMUSP00000141804	TRANSLATION	nonsense_mediated_decay	-	-	1	75	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026073	Il1r2	ENSMUST00000027243	ENSMUSP00000027243	TRANSLATION	protein_coding	-	CCDS14909.1	1	410	0	6.3	0.5	63.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026073	Il1r2	ENSMUST00000194913	ENSMUSP00000141785	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073481	Mtarc2	ENSMUST00000161341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073481	Mtarc2	ENSMUST00000162501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073481	Mtarc2	ENSMUST00000162261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073481	Mtarc2	ENSMUST00000161359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073481	Mtarc2	ENSMUST00000068725	ENSMUSP00000066715	TRANSLATION	protein_coding	-	CCDS15594.1	1	338	0	0	1.5	253.7	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000073481	Mtarc2	ENSMUST00000160982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073481	Mtarc2	ENSMUST00000161821	ENSMUSP00000125374	TRANSLATION	protein_coding	stop	-	3	190	0	0	0	154	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073481	Mtarc2	ENSMUST00000160318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073481	Mtarc2	ENSMUST00000159293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073481	Mtarc2	ENSMUST00000162866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057335	Cep170	ENSMUST00000193098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057335	Cep170	ENSMUST00000192664	ENSMUSP00000141327	TRANSLATION	protein_coding	start	-	1	296	0	0	0	324.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000193765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057335	Cep170	ENSMUST00000195433	ENSMUSP00000142108	TRANSLATION	nonsense_mediated_decay	-	-	5	96	0	2.75	0	60.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000194727	ENSMUSP00000141793	TRANSLATION	protein_coding	-	-	5	1588	0	4.58	1.5	913.6	0	-4,0	-	-	11.124	ALTERNATIVE:2
ENSMUSG00000057335	Cep170	ENSMUST00000194489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057335	Cep170	ENSMUST00000192991	ENSMUSP00000141902	TRANSLATION	protein_coding	start	-	5	346	0	0	0	371.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000192927	ENSMUSP00000142032	TRANSLATION	protein_coding	start	-	1	787	0	0	0	416.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000057037	ENSMUSP00000059562	TRANSLATION	protein_coding	-	CCDS48461.1	5	1578	0	4.58	1.5	928.2	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000057335	Cep170	ENSMUST00000195717	ENSMUSP00000141769	TRANSLATION	protein_coding	-	CCDS48461.1	5	1578	0	4.58	1.5	928.2	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000057335	Cep170	ENSMUST00000194263	ENSMUSP00000141720	TRANSLATION	protein_coding	stop	-	2	91	0	2.75	0	60.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000194371	ENSMUSP00000142131	TRANSLATION	protein_coding	start/stop	-	3	158	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000192643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057335	Cep170	ENSMUST00000192961	ENSMUSP00000142271	TRANSLATION	protein_coding	-	-	1	236	0	4.58	0	60.5	0	-4,0	-	-	6	MINOR
ENSMUSG00000057335	Cep170	ENSMUST00000194984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055547	Apobec4	ENSMUST00000068875	ENSMUSP00000069723	TRANSLATION	protein_coding	-	CCDS35738.1	1	374	3	0	0.5	89.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000048126	Col6a3	ENSMUST00000187753	ENSMUSP00000140280	TRANSLATION	protein_coding	stop	-	2	74	0	1	0	32.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000048126	Col6a3	ENSMUST00000097653	ENSMUSP00000137585	TRANSLATION	protein_coding	-	CCDS56640.1	5	2677	3	12.215	0.5	1058.2	0	4,-1	-	-	4.332	PRINCIPAL:1
ENSMUSG00000048126	Col6a3	ENSMUST00000130846	ENSMUSP00000115210	TRANSLATION	protein_coding	stop	-	1	1703	7	4.2	0	1091.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000048126	Col6a3	ENSMUST00000056925	ENSMUSP00000057131	TRANSLATION	protein_coding	stop	-	5	3284	7	14.335	0.5	1469.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000048126	Col6a3	ENSMUST00000188587	ENSMUSP00000140858	TRANSLATION	protein_coding	stop	-	5	2677	3	12.215	0.5	1058.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000048126	Col6a3	ENSMUST00000150769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048126	Col6a3	ENSMUST00000145750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048126	Col6a3	ENSMUST00000136916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038331	Satb2	ENSMUST00000042857	ENSMUSP00000046067	TRANSLATION	protein_coding	-	-	1	674	0	7.52	0	387	0	-4,-6	-	-	4.704	MINOR
ENSMUSG00000038331	Satb2	ENSMUST00000114415	ENSMUSP00000110057	TRANSLATION	protein_coding	-	CCDS14965.1	1	733	0	9.02	8.8	458.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038331	Satb2	ENSMUST00000177424	ENSMUSP00000135391	TRANSLATION	protein_coding	-	-	5	615	0	6.02	0	244.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038331	Satb2	ENSMUST00000177282	ENSMUSP00000135542	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038331	Satb2	ENSMUST00000176759	ENSMUSP00000135163	TRANSLATION	protein_coding	stop	-	3	104	0	1.186	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037942	Crp	ENSMUST00000038495	ENSMUSP00000044665	TRANSLATION	protein_coding	-	CCDS35787.1	2	225	8	1	2.9	319.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000037942	Crp	ENSMUST00000194251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067879	Vxn	ENSMUST00000088666	ENSMUSP00000086041	TRANSLATION	protein_coding	-	CCDS14813.1	1	207	0	0	5.1	280.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000041801	Phlda3	ENSMUST00000038945	ENSMUSP00000040614	TRANSLATION	protein_coding	-	CCDS35722.1	1	125	9	0	7.6	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000041801	Phlda3	ENSMUST00000136445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038866	Zcchc2	ENSMUST00000118196	ENSMUSP00000113974	TRANSLATION	protein_coding	-	CCDS48335.1	5	1166	4	0	0.5	25.9	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000038866	Zcchc2	ENSMUST00000119166	ENSMUSP00000113128	TRANSLATION	protein_coding	-	CCDS48336.1	1	1155	4	0	0.5	25.9	0	-4,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000038866	Zcchc2	ENSMUST00000131830	ENSMUSP00000140540	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038866	Zcchc2	ENSMUST00000186983	ENSMUSP00000141148	TRANSLATION	protein_coding	start	-	1	758	4	0	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038866	Zcchc2	ENSMUST00000188954	ENSMUSP00000139971	TRANSLATION	protein_coding	start/stop	-	3	257	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000190854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014602	Kif1a	ENSMUST00000112958	ENSMUSP00000108582	TRANSLATION	protein_coding	-	CCDS78651.1	1	1698	11	15.53	3.9	909.1	0	-4,-1	-	-	17.763	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000190723	ENSMUSP00000140163	TRANSLATION	protein_coding	-	-	5	1791	11	15.53	5.3	935	0	-4,-1	-	-	19.956	ALTERNATIVE:1
ENSMUSG00000014602	Kif1a	ENSMUST00000186828	ENSMUSP00000139403	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	0	0	53.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000188493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014602	Kif1a	ENSMUST00000190249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014602	Kif1a	ENSMUST00000186861	ENSMUSP00000141194	TRANSLATION	protein_coding	stop	-	2	109	10	2.75	0	87	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000188136	ENSMUSP00000140656	TRANSLATION	nonsense_mediated_decay	start	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000086819	ENSMUSP00000084029	TRANSLATION	protein_coding	-	CCDS78652.1	1	1698	11	15.53	6.3	927	0	-4,-1	-	-	19.929	ALTERNATIVE:1
ENSMUSG00000014602	Kif1a	ENSMUST00000171796	ENSMUSP00000128432	TRANSLATION	protein_coding	-	CCDS48327.1	1	1697	11	15.53	5.1	910.4	0	-4,-1	-	-	18.387	MINOR
ENSMUSG00000014602	Kif1a	ENSMUST00000171556	ENSMUSP00000130717	TRANSLATION	protein_coding	-	CCDS48326.1	1	1689	11	15.53	7.6	914.6	0	-4,-1	-	-	19.776	PRINCIPAL:3
ENSMUSG00000004709	Cd244a	ENSMUST00000194797	ENSMUSP00000141898	TRANSLATION	nonsense_mediated_decay	-	-	1	312	0	1.57	0	189.8	1	2,-2	-	-	-1	MINOR
ENSMUSG00000004709	Cd244a	ENSMUST00000195804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004709	Cd244a	ENSMUST00000194170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004709	Cd244a	ENSMUST00000004829	ENSMUSP00000004829	TRANSLATION	protein_coding	-	CCDS35778.1	1	397	0	1.57	0.5	189.8	1	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026281	Dtymk	ENSMUST00000027503	ENSMUSP00000027503	TRANSLATION	protein_coding	-	CCDS48329.1	1	212	13	5	7.1	170.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026281	Dtymk	ENSMUST00000112890	ENSMUSP00000108511	TRANSLATION	protein_coding	-	CCDS35672.1	1	80	7	2	0.5	71.6	0	-4,-7	-	-	2.04	MINOR
ENSMUSG00000026281	Dtymk	ENSMUST00000144106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026281	Dtymk	ENSMUST00000112893	ENSMUSP00000108514	TRANSLATION	protein_coding	-	-	2	154	6	3	0	88.2	0	-4,-7	-	-	4.368	MINOR
ENSMUSG00000026103	Gls	ENSMUST00000147825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000114512	ENSMUSP00000110157	TRANSLATION	protein_coding	-	-	5	491	10	11.76	2	451.8	0	-4,-5	-	-	13.878	MINOR
ENSMUSG00000026103	Gls	ENSMUST00000114513	ENSMUSP00000110158	TRANSLATION	protein_coding	-	CCDS35561.1	5	674	10	13.82	1.5	451.8	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000026103	Gls	ENSMUST00000148917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000142976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026103	Gls	ENSMUST00000126221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000139273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026103	Gls	ENSMUST00000136654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000114510	ENSMUSP00000110155	TRANSLATION	protein_coding	-	CCDS48256.1	1	603	10	12.72	1.5	405.8	0	-2,1	-	-	13.038	MINOR
ENSMUSG00000026103	Gls	ENSMUST00000123324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000138906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000151694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000156887	ENSMUSP00000116901	TRANSLATION	protein_coding	start	-	5	205	2	4.628	0	128.9	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000026103	Gls	ENSMUST00000145514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000129107	ENSMUSP00000121408	TRANSLATION	protein_coding	start/stop	-	5	123	2	3.198	0	82.9	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000026103	Gls	ENSMUST00000114509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026103	Gls	ENSMUST00000155587	ENSMUSP00000115358	TRANSLATION	protein_coding	start	-	5	235	7	5.929	0	288.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039997	Ifi203	ENSMUST00000081216	ENSMUSP00000079976	TRANSLATION	protein_coding	-	CCDS35793.1	1	409	0	3.62	0.5	285.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039997	Ifi203	ENSMUST00000129829	ENSMUSP00000122424	TRANSLATION	protein_coding	-	CCDS78754.1	1	871	0	3.62	0.5	285.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039997	Ifi203	ENSMUST00000128430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039997	Ifi203	ENSMUST00000156895	ENSMUSP00000114221	TRANSLATION	protein_coding	-	CCDS48453.1	1	457	0	3.62	0.5	285.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039997	Ifi203	ENSMUST00000140143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039997	Ifi203	ENSMUST00000123708	ENSMUSP00000121480	TRANSLATION	protein_coding	-	CCDS35793.1	1	409	0	3.62	0.5	285.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039997	Ifi203	ENSMUST00000042228	ENSMUSP00000042071	TRANSLATION	protein_coding	-	CCDS48453.1	1	457	0	3.62	0.5	285.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039997	Ifi203	ENSMUST00000135331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039997	Ifi203	ENSMUST00000138143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067795	4930444P10Rik	ENSMUST00000151004	ENSMUSP00000119257	TRANSLATION	protein_coding	-	CCDS56622.1	3	154	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000067795	4930444P10Rik	ENSMUST00000115367	ENSMUSP00000111024	TRANSLATION	protein_coding	-	-	5	185	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000067795	4930444P10Rik	ENSMUST00000145070	ENSMUSP00000137853	TRANSLATION	protein_coding	-	CCDS56622.1	2	154	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000026141	Col19a1	ENSMUST00000051344	ENSMUSP00000052606	TRANSLATION	protein_coding	-	-	1	1069	0	17.49	0	168.2	0	2,-3	-	-	6.402	MINOR
ENSMUSG00000026141	Col19a1	ENSMUST00000144297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026141	Col19a1	ENSMUST00000115244	ENSMUSP00000110899	TRANSLATION	protein_coding	-	CCDS14854.1	1	1136	0	19.415	0.5	197.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000043230	Fam124b	ENSMUST00000161427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043230	Fam124b	ENSMUST00000058748	ENSMUSP00000052208	TRANSLATION	protein_coding	-	CCDS15093.1	1	456	0	0	1.5	348.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000049353	Rd3	ENSMUST00000175680	ENSMUSP00000135650	TRANSLATION	protein_coding	-	CCDS78776.1	1	105	0	0	0.5	68.9	0	-4,-7	-	-	0.984	MINOR
ENSMUSG00000049353	Rd3	ENSMUST00000192547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049353	Rd3	ENSMUST00000181512	ENSMUSP00000137756	TRANSLATION	protein_coding	-	CCDS78776.1	5	105	0	0	0.5	68.9	0	-4,-7	-	-	0.984	MINOR
ENSMUSG00000049353	Rd3	ENSMUST00000180463	ENSMUSP00000138049	TRANSLATION	protein_coding	-	CCDS15626.3	1	195	0	0	6.3	152.5	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000048775	Serpinb13	ENSMUST00000027564	ENSMUSP00000027564	TRANSLATION	protein_coding	-	CCDS15213.1	1	389	0	6.65	2.7	384.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048775	Serpinb13	ENSMUST00000136766	ENSMUSP00000118572	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	1.4	0	52.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025971	Maip1	ENSMUST00000027114	ENSMUSP00000027114	TRANSLATION	protein_coding	-	CCDS48266.1	1	291	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000025971	Maip1	ENSMUST00000185709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038034	Igsf8	ENSMUST00000139528	ENSMUSP00000134280	TRANSLATION	protein_coding	-	-	2	548	0	0.96	1	0	3	-4,-5	-	-	6	MINOR
ENSMUSG00000038034	Igsf8	ENSMUST00000128508	ENSMUSP00000122611	TRANSLATION	protein_coding	stop	-	5	149	0	0	0	35.2	0	4,-2	-	-	-1	MINOR
ENSMUSG00000038034	Igsf8	ENSMUST00000155363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038034	Igsf8	ENSMUST00000195659	ENSMUSP00000141313	TRANSLATION	protein_coding	start	-	3	107	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000038034	Igsf8	ENSMUST00000039506	ENSMUSP00000041232	TRANSLATION	protein_coding	-	CCDS15511.1	1	611	0	0.96	0.5	35.2	3	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038034	Igsf8	ENSMUST00000194505	ENSMUSP00000141588	TRANSLATION	protein_coding	start	-	3	208	0	0.6	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000038034	Igsf8	ENSMUST00000085912	ENSMUSP00000083076	TRANSLATION	protein_coding	-	CCDS15511.1	5	611	0	0.96	0.5	35.2	3	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038034	Igsf8	ENSMUST00000150598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026176	Ctdsp1	ENSMUST00000027367	ENSMUSP00000027367	TRANSLATION	protein_coding	-	CCDS15048.1	1	261	10	4.5	7.5	175.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026176	Ctdsp1	ENSMUST00000141175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026176	Ctdsp1	ENSMUST00000152659	ENSMUSP00000114526	TRANSLATION	protein_coding	start/stop	-	2	131	4	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054387	Mdm4	ENSMUST00000191212	ENSMUSP00000140006	TRANSLATION	nonsense_mediated_decay	-	-	1	128	0	2.85	0	34	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054387	Mdm4	ENSMUST00000186617	ENSMUSP00000140812	TRANSLATION	protein_coding	-	-	1	318	0	3.544	0	30.5	0	-4,-7	-	-	6.39	MINOR
ENSMUSG00000054387	Mdm4	ENSMUST00000186645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054387	Mdm4	ENSMUST00000186513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054387	Mdm4	ENSMUST00000187244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054387	Mdm4	ENSMUST00000189596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054387	Mdm4	ENSMUST00000067429	ENSMUSP00000070411	TRANSLATION	protein_coding	-	CCDS15290.1	1	489	12	4.144	6.3	104	0	-4,-7	-	-	20	PRINCIPAL:3
ENSMUSG00000054387	Mdm4	ENSMUST00000187529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054387	Mdm4	ENSMUST00000185418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054387	Mdm4	ENSMUST00000185398	ENSMUSP00000140090	TRANSLATION	nonsense_mediated_decay	-	-	1	141	0	3.05	0	34	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054387	Mdm4	ENSMUST00000190807	ENSMUSP00000140284	TRANSLATION	protein_coding	stop	-	5	110	0	2.85	0	34	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054387	Mdm4	ENSMUST00000067398	ENSMUSP00000068661	TRANSLATION	protein_coding	-	CCDS78683.1	1	490	12	4.144	6.3	103.4	0	-4,-7	-	-	19.964	ALTERNATIVE:1
ENSMUSG00000054387	Mdm4	ENSMUST00000190312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054387	Mdm4	ENSMUST00000188090	ENSMUSP00000140609	TRANSLATION	protein_coding	-	CCDS15290.1	1	489	12	4.144	6.3	104	0	-4,-7	-	-	20	PRINCIPAL:3
ENSMUSG00000040113	Mettl11b	ENSMUST00000159679	ENSMUSP00000124211	TRANSLATION	protein_coding	-	CCDS48420.1	1	283	16	3	6.3	239.1	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000040113	Mettl11b	ENSMUST00000160495	ENSMUSP00000124700	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026576	Atp1b1	ENSMUST00000027863	ENSMUSP00000027863	TRANSLATION	protein_coding	-	CCDS35755.1	1	304	3	6.1	8.3	328.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026576	Atp1b1	ENSMUST00000192522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026576	Atp1b1	ENSMUST00000193367	ENSMUSP00000141777	TRANSLATION	protein_coding	stop	-	2	132	0	2.75	0	127.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026576	Atp1b1	ENSMUST00000193980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025959	Klf7	ENSMUST00000135075	ENSMUSP00000120537	TRANSLATION	protein_coding	stop	-	2	111	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025959	Klf7	ENSMUST00000055001	ENSMUSP00000054674	TRANSLATION	protein_coding	-	-	1	285	9	1.4	0	40.4	0	-4,-6	-	-	12.216	MINOR
ENSMUSG00000025959	Klf7	ENSMUST00000114086	ENSMUSP00000109720	TRANSLATION	protein_coding	-	CCDS15003.1	1	301	12	1.9	7.8	63.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000026342	Slc35f5	ENSMUST00000190037	ENSMUSP00000139639	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	0	4	-4,0	-	-	-1	MINOR
ENSMUSG00000026342	Slc35f5	ENSMUST00000189443	ENSMUSP00000140918	TRANSLATION	nonsense_mediated_decay	start	-	3	122	0	0	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000026342	Slc35f5	ENSMUST00000027580	ENSMUSP00000027580	TRANSLATION	protein_coding	-	CCDS35694.1	1	524	0	0	7.5	0	15	-4,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000026134	Prim2	ENSMUST00000027312	ENSMUSP00000027312	TRANSLATION	protein_coding	-	CCDS14862.1	1	505	12	11.75	6.4	321.4	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000026134	Prim2	ENSMUST00000187353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026134	Prim2	ENSMUST00000189552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006538	Ihh	ENSMUST00000189364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006538	Ihh	ENSMUST00000164097	ENSMUSP00000128056	TRANSLATION	protein_coding	-	-	1	411	11	2.6	3.9	529.1	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000026483	Fam129a	ENSMUST00000111875	ENSMUSP00000107506	TRANSLATION	protein_coding	-	-	1	274	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000026483	Fam129a	ENSMUST00000134499	ENSMUSP00000115692	TRANSLATION	protein_coding	stop	-	2	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026483	Fam129a	ENSMUST00000148810	ENSMUSP00000115822	TRANSLATION	protein_coding	-	CCDS48393.1	1	926	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000026483	Fam129a	ENSMUST00000097541	ENSMUSP00000095148	TRANSLATION	nonsense_mediated_decay	-	-	1	584	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026483	Fam129a	ENSMUST00000086267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025920	Stau2	ENSMUST00000153966	ENSMUSP00000117537	TRANSLATION	protein_coding	stop	-	5	97	0	1.4	0	38.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000162007	ENSMUSP00000124303	TRANSLATION	protein_coding	-	CCDS83529.1	1	479	0	5.456	5.1	174.4	0	-4,-5	-	-	9.654	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000159558	ENSMUSP00000125726	TRANSLATION	protein_coding	-	CCDS83529.1	5	479	0	5.456	5.1	174.4	0	-4,-5	-	-	9.654	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000145092	ENSMUSP00000115041	TRANSLATION	protein_coding	-	-	5	93	0	0.6	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000144138	ENSMUSP00000119130	TRANSLATION	protein_coding	-	-	5	125	0	1.4	0	38.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000127420	ENSMUSP00000122116	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	1.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000128957	ENSMUSP00000122410	TRANSLATION	protein_coding	-	CCDS83528.1	5	511	0	6.256	3.9	212.6	0	-4,-5	-	-	13.094	ALTERNATIVE:2
ENSMUSG00000025920	Stau2	ENSMUST00000131257	ENSMUSP00000121410	TRANSLATION	protein_coding	-	-	5	473	0	5.456	1.2	174.4	0	-4,-5	-	-	8.182	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000162435	ENSMUSP00000123827	TRANSLATION	protein_coding	-	CCDS48223.1	5	538	0	5.456	5.3	173.7	0	-4,-5	-	-	9.686	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000115360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025920	Stau2	ENSMUST00000115359	ENSMUSP00000111016	TRANSLATION	protein_coding	-	-	1	125	0	1.4	0	38.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000162751	ENSMUSP00000124505	TRANSLATION	protein_coding	-	CCDS14831.2	1	570	0	6.256	6.3	211.9	0	-4,-5	-	-	13.958	PRINCIPAL:3
ENSMUSG00000025920	Stau2	ENSMUST00000151888	ENSMUSP00000125473	TRANSLATION	protein_coding	stop	-	2	55	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000054668	ENSMUSP00000053190	TRANSLATION	protein_coding	-	CCDS14831.2	5	570	0	6.256	6.3	211.9	0	-4,-5	-	-	13.958	PRINCIPAL:3
ENSMUSG00000025920	Stau2	ENSMUST00000027052	ENSMUSP00000027052	TRANSLATION	protein_coding	-	CCDS48223.1	1	538	0	5.456	5.3	173.7	0	-4,-5	-	-	9.686	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000162627	ENSMUSP00000123781	TRANSLATION	protein_coding	-	CCDS48223.1	5	538	0	5.456	5.3	173.7	0	-4,-5	-	-	9.686	MINOR
ENSMUSG00000025920	Stau2	ENSMUST00000149320	ENSMUSP00000118489	TRANSLATION	protein_coding	-	CCDS83528.1	5	511	0	6.256	3.9	212.6	0	-4,-5	-	-	13.094	ALTERNATIVE:2
ENSMUSG00000034088	Hdlbp	ENSMUST00000170883	ENSMUSP00000127903	TRANSLATION	protein_coding	-	CCDS15189.1	1	1268	0	13.485	8.8	635	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034088	Hdlbp	ENSMUST00000185349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034088	Hdlbp	ENSMUST00000188165	ENSMUSP00000139777	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034088	Hdlbp	ENSMUST00000189951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034088	Hdlbp	ENSMUST00000186787	ENSMUSP00000139719	TRANSLATION	protein_coding	stop	-	5	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034088	Hdlbp	ENSMUST00000042498	ENSMUSP00000043047	TRANSLATION	protein_coding	-	CCDS15189.1	1	1268	0	13.485	8.8	635	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034088	Hdlbp	ENSMUST00000189025	ENSMUSP00000140399	TRANSLATION	protein_coding	stop	-	5	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034088	Hdlbp	ENSMUST00000186164	ENSMUSP00000139671	TRANSLATION	protein_coding	-	-	5	1199	0	12.885	0	595	0	-4,-5	-	-	8.4	MINOR
ENSMUSG00000034088	Hdlbp	ENSMUST00000188844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034088	Hdlbp	ENSMUST00000188988	ENSMUSP00000140946	TRANSLATION	protein_coding	stop	-	2	178	0	1.08	0	21.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034088	Hdlbp	ENSMUST00000190321	ENSMUSP00000139448	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026315	Serpinb8	ENSMUST00000151283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026315	Serpinb8	ENSMUST00000112706	ENSMUSP00000108326	TRANSLATION	protein_coding	-	CCDS15220.1	1	374	0	8.25	6.3	434.7	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026315	Serpinb8	ENSMUST00000123086	ENSMUSP00000122907	TRANSLATION	protein_coding	start	-	5	41	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026315	Serpinb8	ENSMUST00000000514	ENSMUSP00000000514	TRANSLATION	protein_coding	-	CCDS15220.1	1	374	0	8.25	6.3	434.7	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046994	Mars2	ENSMUST00000061334	ENSMUSP00000049770	TRANSLATION	protein_coding	-	CCDS14963.1	-	586	23	0.7	1.5	362.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000067158	Col4a4	ENSMUST00000087050	ENSMUSP00000084282	TRANSLATION	protein_coding	-	CCDS35630.1	1	1682	0	16.575	0.5	662.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067158	Col4a4	ENSMUST00000135271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087247	Alkal1	ENSMUST00000133144	ENSMUSP00000137420	TRANSLATION	protein_coding	-	CCDS56620.1	1	127	0	0	1.5	139	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000070643	Sox13	ENSMUST00000153799	ENSMUSP00000119729	TRANSLATION	protein_coding	-	CCDS48363.1	1	613	0	2	1.5	79.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000070643	Sox13	ENSMUST00000145922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070643	Sox13	ENSMUST00000094551	ENSMUSP00000092130	TRANSLATION	protein_coding	-	CCDS48363.1	1	613	0	2	1.5	79.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000070643	Sox13	ENSMUST00000144386	ENSMUSP00000122980	TRANSLATION	protein_coding	-	-	1	504	0	2	0	79.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000070643	Sox13	ENSMUST00000126530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070870	Cryge	ENSMUST00000087359	ENSMUSP00000084617	TRANSLATION	protein_coding	-	CCDS35598.1	1	174	3	3	8.8	212.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070870	Cryge	ENSMUST00000161960	ENSMUSP00000124711	TRANSLATION	protein_coding	-	-	1	156	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026349	Ccnt2	ENSMUST00000126850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026349	Ccnt2	ENSMUST00000143513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026349	Ccnt2	ENSMUST00000149760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026349	Ccnt2	ENSMUST00000125760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026349	Ccnt2	ENSMUST00000153359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026349	Ccnt2	ENSMUST00000112570	ENSMUSP00000108189	TRANSLATION	protein_coding	-	-	1	657	0	6.5	1	67.6	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000026349	Ccnt2	ENSMUST00000027587	ENSMUSP00000027587	TRANSLATION	protein_coding	-	CCDS15248.1	1	723	0	6.5	1.5	67.6	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000041670	Rims1	ENSMUST00000081544	ENSMUSP00000080259	TRANSLATION	protein_coding	-	-	5	1260	8	10.02	0	146.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000041670	Rims1	ENSMUST00000164877	ENSMUSP00000131808	TRANSLATION	protein_coding	-	-	1	219	0	4	0	65.6	0	-4,-2	-	-	1.164	MINOR
ENSMUSG00000041670	Rims1	ENSMUST00000115273	ENSMUSP00000110928	TRANSLATION	protein_coding	-	-	5	1311	8	10.02	0	146.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000041670	Rims1	ENSMUST00000239339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041670	Rims1	ENSMUST00000097809	ENSMUSP00000095418	TRANSLATION	protein_coding	-	-	5	1335	8	10.02	0	146.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000041670	Rims1	ENSMUST00000185942	ENSMUSP00000140963	TRANSLATION	protein_coding	start	-	1	729	0	4	0	65.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041670	Rims1	ENSMUST00000097808	ENSMUSP00000095417	TRANSLATION	protein_coding	stop	-	5	803	8	5.7	0	82	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041670	Rims1	ENSMUST00000218140	ENSMUSP00000151404	TRANSLATION	protein_coding	stop	-	5	388	8	1.2	0	32.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041670	Rims1	ENSMUST00000097810	ENSMUSP00000095419	TRANSLATION	protein_coding	-	-	5	1396	8	10.02	0	145.5	0	-4,-7	-	-	17.958	ALTERNATIVE:2
ENSMUSG00000041670	Rims1	ENSMUST00000239255	ENSMUSP00000159233	TRANSLATION	protein_coding	stop	-	-	129	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041670	Rims1	ENSMUST00000097811	ENSMUSP00000095420	TRANSLATION	protein_coding	-	-	5	1424	8	10.02	0	145.5	0	-4,-7	-	-	17.958	PRINCIPAL:5
ENSMUSG00000015961	Adss	ENSMUST00000016105	ENSMUSP00000016105	TRANSLATION	protein_coding	-	CCDS15555.1	1	456	18	11.25	10.8	601.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000015961	Adss	ENSMUST00000161808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015961	Adss	ENSMUST00000159184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049339	Retreg2	ENSMUST00000190240	ENSMUSP00000139410	TRANSLATION	protein_coding	-	CCDS78621.1	1	504	0	0	0.5	0	10	-3,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000049339	Retreg2	ENSMUST00000097694	ENSMUSP00000095300	TRANSLATION	protein_coding	-	CCDS35621.1	1	541	0	0	0.5	0	10	-3,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000049339	Retreg2	ENSMUST00000188873	ENSMUSP00000139508	TRANSLATION	nonsense_mediated_decay	-	-	5	173	0	0	0	0	6	-3,-5	-	-	-1	MINOR
ENSMUSG00000049339	Retreg2	ENSMUST00000188977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049339	Retreg2	ENSMUST00000189345	ENSMUSP00000140909	TRANSLATION	protein_coding	start/stop	-	1	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049339	Retreg2	ENSMUST00000189650	ENSMUSP00000139473	TRANSLATION	protein_coding	start/stop	-	2	149	0	0	0	0	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000049339	Retreg2	ENSMUST00000186037	ENSMUSP00000139890	TRANSLATION	protein_coding	start	-	1	490	0	0	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000049339	Retreg2	ENSMUST00000187901	ENSMUSP00000140636	TRANSLATION	protein_coding	stop	-	2	84	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000068705	ENSMUSP00000070343	TRANSLATION	protein_coding	-	CCDS35758.1	1	209	0	2.76	5.1	74.1	3	2,-3	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000026566	Mpzl1	ENSMUST00000193948	ENSMUSP00000142186	TRANSLATION	protein_coding	start	-	3	82	0	1.198	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000195410	ENSMUSP00000141791	TRANSLATION	protein_coding	start	-	3	126	0	2.28	0	61	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000194829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026566	Mpzl1	ENSMUST00000192716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026566	Mpzl1	ENSMUST00000193172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026566	Mpzl1	ENSMUST00000193023	ENSMUSP00000141463	TRANSLATION	protein_coding	stop	-	1	248	0	2.76	0	74.1	3	2,-3	-	-	-1	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000194437	ENSMUSP00000142164	TRANSLATION	protein_coding	-	CCDS83623.1	3	119	0	1.25	1.7	0	0	2,-3	-	-	2.982	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000193910	ENSMUSP00000142046	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026566	Mpzl1	ENSMUST00000111435	ENSMUSP00000107062	TRANSLATION	protein_coding	-	CCDS35757.1	1	270	0	2.76	6.3	74.1	3	2,-3	-	-	14	PRINCIPAL:4
ENSMUSG00000026566	Mpzl1	ENSMUST00000192848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026566	Mpzl1	ENSMUST00000191818	ENSMUSP00000141361	TRANSLATION	protein_coding	-	-	1	183	0	2.76	0	74.1	3	-4,-7	-	-	12	MINOR
ENSMUSG00000070524	Fcrlb	ENSMUST00000094337	ENSMUSP00000091895	TRANSLATION	protein_coding	-	CCDS15475.1	1	427	0	2.558	1.5	71.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026027	Stradb	ENSMUST00000147637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026027	Stradb	ENSMUST00000153990	ENSMUSP00000137724	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026027	Stradb	ENSMUST00000152318	ENSMUSP00000137790	TRANSLATION	protein_coding	start	-	5	129	4	2.962	0	61.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026027	Stradb	ENSMUST00000027185	ENSMUSP00000027185	TRANSLATION	protein_coding	-	CCDS14981.1	1	418	18	7.76	7.5	122.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000026027	Stradb	ENSMUST00000123301	ENSMUSP00000138036	TRANSLATION	nonsense_mediated_decay	-	-	1	189	14	3.85	0	56.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026027	Stradb	ENSMUST00000123965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026027	Stradb	ENSMUST00000114296	ENSMUSP00000109935	TRANSLATION	protein_coding	-	-	1	209	14	3.85	0	56.1	0	-4,-6	-	-	5.358	MINOR
ENSMUSG00000102418	Sh2d1b1	ENSMUST00000179976	ENSMUSP00000137069	TRANSLATION	protein_coding	-	CCDS35767.1	1	132	0	2.75	1.5	57.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042800	Spata46	ENSMUST00000056991	ENSMUSP00000062245	TRANSLATION	protein_coding	-	CCDS15471.1	1	204	3	0	1.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000033952	Aspm	ENSMUST00000200083	ENSMUSP00000142880	TRANSLATION	protein_coding	-	-	1	1857	0	4.025	0	248.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000033952	Aspm	ENSMUST00000053364	ENSMUSP00000059159	TRANSLATION	protein_coding	-	CCDS35729.1	1	3122	0	4.025	0.5	631.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033952	Aspm	ENSMUST00000197096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033952	Aspm	ENSMUST00000196272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033952	Aspm	ENSMUST00000199998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042111	Ccdc115	ENSMUST00000042493	ENSMUSP00000042918	TRANSLATION	protein_coding	-	CCDS14866.1	1	180	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000042111	Ccdc115	ENSMUST00000188583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026639	Lamb3	ENSMUST00000016315	ENSMUSP00000016315	TRANSLATION	protein_coding	-	CCDS15637.1	1	1168	0	9.47	2.7	363.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026639	Lamb3	ENSMUST00000193128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026639	Lamb3	ENSMUST00000194407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026639	Lamb3	ENSMUST00000162180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026639	Lamb3	ENSMUST00000159955	ENSMUSP00000123875	TRANSLATION	protein_coding	-	CCDS15637.1	1	1168	0	9.47	2.7	363.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026639	Lamb3	ENSMUST00000162977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026639	Lamb3	ENSMUST00000194677	ENSMUSP00000142053	TRANSLATION	protein_coding	-	CCDS15637.1	1	1168	0	9.47	2.7	363.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026639	Lamb3	ENSMUST00000192322	ENSMUSP00000141302	TRANSLATION	protein_coding	stop	-	5	244	0	4.1	0	173.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026639	Lamb3	ENSMUST00000161526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026283	Ing5	ENSMUST00000027505	ENSMUSP00000027505	TRANSLATION	protein_coding	-	CCDS35673.1	1	240	8	5.38	12.3	109.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026283	Ing5	ENSMUST00000188402	ENSMUSP00000140739	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	1.33	0	43.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026283	Ing5	ENSMUST00000190476	ENSMUSP00000140498	TRANSLATION	protein_coding	-	-	1	213	8	4.38	2.5	68.5	0	-4,-5	-	-	14.056	MINOR
ENSMUSG00000026482	Rgl1	ENSMUST00000111859	ENSMUSP00000107490	TRANSLATION	protein_coding	-	-	5	803	0	9.64	8.8	318	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000026482	Rgl1	ENSMUST00000128251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026482	Rgl1	ENSMUST00000188395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026482	Rgl1	ENSMUST00000111857	ENSMUSP00000107488	TRANSLATION	protein_coding	-	-	5	766	0	9.4	6.3	318	0	-4,-5	-	-	13.557	MINOR
ENSMUSG00000026482	Rgl1	ENSMUST00000027760	ENSMUSP00000027760	TRANSLATION	protein_coding	-	CCDS15365.1	1	768	0	9.64	7.6	318	0	-4,-5	-	-	14.538	PRINCIPAL:2
ENSMUSG00000026482	Rgl1	ENSMUST00000149536	ENSMUSP00000141028	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036206	Sh3bp4	ENSMUST00000066279	ENSMUSP00000067581	TRANSLATION	protein_coding	-	CCDS15147.1	1	962	0	0	5.1	118	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000036206	Sh3bp4	ENSMUST00000123745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037395	Rcor3	ENSMUST00000192222	ENSMUSP00000141270	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000192491	ENSMUSP00000141753	TRANSLATION	protein_coding	-	CCDS78777.1	1	351	4	7.2	0.5	79.8	0	-4,-5	-	-	7.468	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000194362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037395	Rcor3	ENSMUST00000193664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037395	Rcor3	ENSMUST00000192866	ENSMUSP00000142054	TRANSLATION	protein_coding	-	CCDS83667.1	5	551	4	12.2	1.5	122	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037395	Rcor3	ENSMUST00000192158	ENSMUSP00000141841	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	1.95	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000193144	ENSMUSP00000142001	TRANSLATION	protein_coding	stop	-	3	55	0	1.75	0	54	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000194395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037395	Rcor3	ENSMUST00000194493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037395	Rcor3	ENSMUST00000073279	ENSMUSP00000073004	TRANSLATION	protein_coding	-	CCDS69995.1	1	451	4	9.2	0.5	79.8	0	-4,-5	-	-	7.468	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000192128	ENSMUSP00000141637	TRANSLATION	protein_coding	-	CCDS78778.1	1	447	4	10.2	0.5	122	0	-4,-5	-	-	11.998	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000194750	ENSMUSP00000142076	TRANSLATION	protein_coding	start/stop	-	3	281	0	6	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000110849	ENSMUSP00000106473	TRANSLATION	protein_coding	-	CCDS69996.1	1	434	4	7.95	0.5	79.8	0	-4,-5	-	-	7.468	MINOR
ENSMUSG00000037395	Rcor3	ENSMUST00000193322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026638	Irf6	ENSMUST00000076521	ENSMUSP00000075839	TRANSLATION	protein_coding	-	CCDS15632.1	1	467	0	4.96	6.3	358.1	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000026638	Irf6	ENSMUST00000193772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026638	Irf6	ENSMUST00000138826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026638	Irf6	ENSMUST00000140066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073650	Catip	ENSMUST00000191010	ENSMUSP00000141181	TRANSLATION	protein_coding	-	-	1	520	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000073650	Catip	ENSMUST00000097697	ENSMUSP00000095303	TRANSLATION	protein_coding	-	CCDS15046.1	1	501	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000073650	Catip	ENSMUST00000186688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073650	Catip	ENSMUST00000128445	ENSMUSP00000117442	TRANSLATION	protein_coding	start/stop	-	5	267	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091318	Gm5415	ENSMUST00000171322	ENSMUSP00000132789	TRANSLATION	protein_coding	-	CCDS48234.1	-	478	5	0.8	0.5	140.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000150761	ENSMUSP00000120298	TRANSLATION	protein_coding	-	CCDS14810.1	1	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000131494	ENSMUSP00000117789	TRANSLATION	protein_coding	-	CCDS14810.1	1	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000130338	ENSMUSP00000141266	TRANSLATION	protein_coding	start	-	3	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033740	St18	ENSMUST00000140079	ENSMUSP00000118322	TRANSLATION	protein_coding	-	CCDS14810.1	1	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000131467	ENSMUSP00000120134	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033740	St18	ENSMUST00000139756	ENSMUSP00000142063	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033740	St18	ENSMUST00000151015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033740	St18	ENSMUST00000132207	ENSMUSP00000142317	TRANSLATION	nonsense_mediated_decay	start	-	3	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033740	St18	ENSMUST00000043578	ENSMUSP00000042056	TRANSLATION	protein_coding	-	CCDS14810.1	1	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000163727	ENSMUSP00000131417	TRANSLATION	protein_coding	-	CCDS14810.1	5	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000142304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033740	St18	ENSMUST00000151281	ENSMUSP00000122055	TRANSLATION	protein_coding	-	CCDS14810.1	1	1045	24	7.05	1.5	551	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033740	St18	ENSMUST00000139838	ENSMUSP00000118129	TRANSLATION	protein_coding	stop	-	3	215	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000115011	ENSMUSP00000110663	TRANSLATION	protein_coding	-	CCDS78563.1	5	358	11	7.435	5.3	271.5	1	0,-4	-	-	18.818	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000125304	ENSMUSP00000117200	TRANSLATION	protein_coding	-	CCDS14878.1	1	347	11	7.6	5.3	285.7	1	0,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000001143	Lman2l	ENSMUST00000192969	ENSMUSP00000141806	TRANSLATION	protein_coding	start	-	3	205	11	5.25	0	194.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000001171	ENSMUSP00000137028	TRANSLATION	nonsense_mediated_decay	-	-	1	157	2	3.1	0	109.6	0	0,-4	-	-	-1	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000123583	ENSMUSP00000137344	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0.6	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000193502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001143	Lman2l	ENSMUST00000152088	ENSMUSP00000119798	TRANSLATION	protein_coding	start	-	2	124	3	2.75	0	69.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001143	Lman2l	ENSMUST00000134594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026514	Cnih3	ENSMUST00000209607	ENSMUSP00000148015	TRANSLATION	protein_coding	-	-	5	187	0	0	0	122.6	7	0,-4	-	-	6	MINOR
ENSMUSG00000026514	Cnih3	ENSMUST00000027795	ENSMUSP00000027795	TRANSLATION	protein_coding	-	CCDS48470.1	1	160	0	0	17.5	117	7	0,-4	-	-	9.664	PRINCIPAL:1
ENSMUSG00000026514	Cnih3	ENSMUST00000162685	ENSMUSP00000124247	TRANSLATION	protein_coding	-	CCDS48471.1	5	112	0	0	0.5	72.8	6	0,-4	-	-	3.012	MINOR
ENSMUSG00000026514	Cnih3	ENSMUST00000161880	ENSMUSP00000124611	TRANSLATION	protein_coding	-	CCDS35810.1	1	179	0	0	0.5	122.6	7	0,-4	-	-	6	MINOR
ENSMUSG00000094429	Gm19965	ENSMUST00000179777	ENSMUSP00000137019	TRANSLATION	protein_coding	-	-	5	723	28	1.4	0	270.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040423	Rc3h1	ENSMUST00000035911	ENSMUSP00000037178	TRANSLATION	protein_coding	-	-	5	1121	7	9	0	49.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000040423	Rc3h1	ENSMUST00000239200	ENSMUSP00000159278	TRANSLATION	nonsense_mediated_decay	-	-	-	257	7	4	0	28.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040423	Rc3h1	ENSMUST00000161609	ENSMUSP00000124871	TRANSLATION	protein_coding	-	CCDS15410.1	1	1130	7	9	1.5	49.6	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000040423	Rc3h1	ENSMUST00000161708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070732	Rbm44	ENSMUST00000185229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070732	Rbm44	ENSMUST00000190965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070732	Rbm44	ENSMUST00000094698	ENSMUSP00000092286	TRANSLATION	protein_coding	-	CCDS15157.1	1	1013	0	0	0.5	31.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070732	Rbm44	ENSMUST00000188818	ENSMUSP00000140854	TRANSLATION	protein_coding	stop	-	3	177	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037408	Cnnm4	ENSMUST00000153128	ENSMUSP00000121317	TRANSLATION	protein_coding	-	CCDS14879.2	1	771	14	1.6	1.5	139.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037408	Cnnm4	ENSMUST00000192530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026480	Ncf2	ENSMUST00000027754	ENSMUSP00000027754	TRANSLATION	protein_coding	-	CCDS15367.1	1	525	0	11.66	5.3	171	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026480	Ncf2	ENSMUST00000187235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026480	Ncf2	ENSMUST00000186568	ENSMUSP00000140404	TRANSLATION	protein_coding	-	CCDS15367.1	1	525	0	11.66	5.3	171	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026480	Ncf2	ENSMUST00000190323	ENSMUSP00000139774	TRANSLATION	protein_coding	stop	-	2	114	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026480	Ncf2	ENSMUST00000187641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026480	Ncf2	ENSMUST00000189135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026432	Avpr1b	ENSMUST00000027690	ENSMUSP00000027690	TRANSLATION	protein_coding	-	CCDS35703.1	1	421	0	1.74	2.9	238	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026432	Avpr1b	ENSMUST00000190410	ENSMUSP00000140527	TRANSLATION	protein_coding	-	-	5	123	0	0.6	0	27.6	2	-4,-7	-	-	2.07	MINOR
ENSMUSG00000095576	Fmo6	ENSMUST00000195576	ENSMUSP00000144106	TRANSLATION	nonsense_mediated_decay	-	-	1	136	15	1.28	0	196.6	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000095576	Fmo6	ENSMUST00000178465	ENSMUSP00000136378	TRANSLATION	protein_coding	-	CCDS56650.1	5	532	34	3.35	6.4	898.4	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000047180	Neurl3	ENSMUST00000056946	ENSMUSP00000055437	TRANSLATION	protein_coding	-	CCDS14875.1	1	254	8	0.98	1.5	183.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047180	Neurl3	ENSMUST00000188666	ENSMUSP00000139665	TRANSLATION	protein_coding	-	-	5	195	0	0.56	0	134.9	0	-4,-5	-	-	6.492	MINOR
ENSMUSG00000040710	St8sia4	ENSMUST00000187936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040710	St8sia4	ENSMUST00000186853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040710	St8sia4	ENSMUST00000189556	ENSMUSP00000140534	TRANSLATION	protein_coding	-	CCDS78661.1	1	266	4	2	0.5	153.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000040710	St8sia4	ENSMUST00000043336	ENSMUSP00000043477	TRANSLATION	protein_coding	-	CCDS15201.1	1	359	10	3	14.7	256.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026154	Sdhaf4	ENSMUST00000155767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026154	Sdhaf4	ENSMUST00000027338	ENSMUSP00000027338	TRANSLATION	protein_coding	-	CCDS14852.1	1	104	0	1	1.5	76.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000037995	Igsf9	ENSMUST00000128638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000132141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000141888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000140814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037995	Igsf9	ENSMUST00000140816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000127052	ENSMUSP00000123401	TRANSLATION	protein_coding	stop	-	3	109	0	0.39	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000037995	Igsf9	ENSMUST00000127482	ENSMUSP00000117854	TRANSLATION	nonsense_mediated_decay	-	-	2	528	0	8.46	0	146.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000037995	Igsf9	ENSMUST00000135267	ENSMUSP00000116948	TRANSLATION	protein_coding	stop	-	5	168	0	3.18	0	52	0	1,-3	-	-	-1	MINOR
ENSMUSG00000037995	Igsf9	ENSMUST00000155426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000193620	ENSMUSP00000142072	TRANSLATION	protein_coding	start/stop	-	3	212	0	3.24	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037995	Igsf9	ENSMUST00000111235	ENSMUSP00000106866	TRANSLATION	protein_coding	-	CCDS15515.1	1	1179	0	11.64	5.1	203.3	1	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000037995	Igsf9	ENSMUST00000150855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037995	Igsf9	ENSMUST00000052629	ENSMUSP00000058275	TRANSLATION	protein_coding	-	CCDS15515.1	1	1179	0	11.64	5.1	203.3	1	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000037995	Igsf9	ENSMUST00000125258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055013	Agap1	ENSMUST00000190096	ENSMUSP00000140599	TRANSLATION	protein_coding	-	CCDS15148.1	1	804	19	10.93	7.3	234.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000055013	Agap1	ENSMUST00000212924	ENSMUSP00000148317	TRANSLATION	protein_coding	start/stop	-	5	132	0	1	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055013	Agap1	ENSMUST00000027521	ENSMUSP00000027521	TRANSLATION	protein_coding	-	CCDS15149.1	1	857	19	10.93	7.3	234.9	0	-4,-6	-	-	21	PRINCIPAL:4
ENSMUSG00000055013	Agap1	ENSMUST00000074945	ENSMUSP00000074478	TRANSLATION	protein_coding	-	-	5	1056	19	10.93	0	233.3	0	-4,-5	-	-	17.904	MINOR
ENSMUSG00000055013	Agap1	ENSMUST00000185417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026223	Itm2c	ENSMUST00000185569	ENSMUSP00000140692	TRANSLATION	protein_coding	-	-	5	232	0	0	1.2	0	1	-4,-6	-	-	0.093	MINOR
ENSMUSG00000026223	Itm2c	ENSMUST00000027425	ENSMUSP00000027425	TRANSLATION	protein_coding	-	CCDS35641.1	1	269	0	0	7.5	75.2	1	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000026223	Itm2c	ENSMUST00000139837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004110	Cacna1e	ENSMUST00000004214	ENSMUSP00000004214	TRANSLATION	protein_coding	-	-	5	1965	0	23.51	0	862.4	7	-4,-7	-	-	0	MINOR
ENSMUSG00000004110	Cacna1e	ENSMUST00000238369	ENSMUSP00000158720	TRANSLATION	protein_coding	stop	-	-	585	0	7.53	0	221	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000004110	Cacna1e	ENSMUST00000187541	ENSMUSP00000140937	TRANSLATION	protein_coding	-	CCDS78710.1	1	2273	0	27.91	2.9	1050.6	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000004110	Cacna1e	ENSMUST00000226546	ENSMUSP00000153897	TRANSLATION	protein_coding	start/stop	-	-	110	0	3	0	123.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004110	Cacna1e	ENSMUST00000211821	ENSMUSP00000148507	TRANSLATION	protein_coding	-	-	5	2254	0	26.91	0	1018	7	-4,-7	-	-	8.046	MINOR
ENSMUSG00000004110	Cacna1e	ENSMUST00000186256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004110	Cacna1e	ENSMUST00000188384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004110	Cacna1e	ENSMUST00000188965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004110	Cacna1e	ENSMUST00000188321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043760	Pkhd1	ENSMUST00000088448	ENSMUSP00000085794	TRANSLATION	protein_coding	-	CCDS14841.1	1	4059	0	0.86	0.5	416.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000043760	Pkhd1	ENSMUST00000128051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043760	Pkhd1	ENSMUST00000147480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043760	Pkhd1	ENSMUST00000132647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041406	BC055324	ENSMUST00000161321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041406	BC055324	ENSMUST00000160926	ENSMUSP00000124826	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041406	BC055324	ENSMUST00000159617	ENSMUSP00000125075	TRANSLATION	nonsense_mediated_decay	start	-	2	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041406	BC055324	ENSMUST00000045876	ENSMUSP00000043143	TRANSLATION	protein_coding	-	CCDS35752.1	1	903	0	0	1.5	614.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000041406	BC055324	ENSMUST00000162949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041406	BC055324	ENSMUST00000097493	ENSMUSP00000095101	TRANSLATION	protein_coding	-	-	1	927	0	0	0	614.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045648	Vwc2l	ENSMUST00000161937	ENSMUSP00000125014	TRANSLATION	protein_coding	-	CCDS78606.1	1	139	0	0	1.7	0	0	1,-4	-	-	0.324	MINOR
ENSMUSG00000045648	Vwc2l	ENSMUST00000159205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045648	Vwc2l	ENSMUST00000053922	ENSMUSP00000058142	TRANSLATION	protein_coding	-	CCDS15028.1	1	222	0	0	7.5	26.8	0	1,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000045648	Vwc2l	ENSMUST00000162182	ENSMUSP00000123819	TRANSLATION	protein_coding	-	-	1	175	0	0	1	26.8	0	1,-4	-	-	6	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000143730	ENSMUSP00000114375	TRANSLATION	protein_coding	stop	-	3	196	27	3.974	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000144874	ENSMUSP00000121418	TRANSLATION	protein_coding	stop	-	5	216	21	3.818	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000135453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033021	Gmppa	ENSMUST00000141124	ENSMUSP00000116783	TRANSLATION	protein_coding	stop	-	3	72	9	1.98	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000124539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033021	Gmppa	ENSMUST00000133418	ENSMUSP00000122443	TRANSLATION	protein_coding	stop	-	5	220	27	4.868	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000037796	ENSMUSP00000035564	TRANSLATION	protein_coding	-	CCDS15072.1	1	420	30	6.818	8.8	29.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033021	Gmppa	ENSMUST00000145166	ENSMUSP00000116754	TRANSLATION	protein_coding	stop	-	1	91	11	2.574	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000131545	ENSMUSP00000120841	TRANSLATION	protein_coding	stop	-	5	223	27	4.868	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000140287	ENSMUSP00000121552	TRANSLATION	protein_coding	stop	-	5	161	21	3.454	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000188097	ENSMUSP00000139936	TRANSLATION	nonsense_mediated_decay	start	-	5	150	15	3.074	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033021	Gmppa	ENSMUST00000113584	ENSMUSP00000109214	TRANSLATION	protein_coding	-	CCDS15072.1	5	420	30	6.818	8.8	29.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033021	Gmppa	ENSMUST00000132291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016262	Sertad4	ENSMUST00000155503	ENSMUSP00000142132	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	56.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016262	Sertad4	ENSMUST00000016406	ENSMUSP00000016406	TRANSLATION	protein_coding	-	CCDS15630.2	3	377	0	0	0.5	56.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016262	Sertad4	ENSMUST00000125391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016262	Sertad4	ENSMUST00000155579	ENSMUSP00000116176	TRANSLATION	protein_coding	-	CCDS15630.2	1	377	0	0	0.5	56.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026581	Sell	ENSMUST00000027871	ENSMUSP00000027871	TRANSLATION	protein_coding	-	CCDS35753.1	1	372	9	4.45	0.5	139.4	0	-2,-4	-	-	17.988	PRINCIPAL:2
ENSMUSG00000026581	Sell	ENSMUST00000192047	ENSMUSP00000142237	TRANSLATION	protein_coding	-	CCDS48421.1	1	336	9	3.45	0.5	139.6	0	-2,-4	-	-	16.002	MINOR
ENSMUSG00000026581	Sell	ENSMUST00000097491	ENSMUSP00000095099	TRANSLATION	protein_coding	-	-	5	387	9	4.45	0.5	139.5	0	-2,-4	-	-	17.994	ALTERNATIVE:2
ENSMUSG00000026581	Sell	ENSMUST00000195358	ENSMUSP00000141365	TRANSLATION	protein_coding	start	-	5	100	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026301	Iqca	ENSMUST00000189690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026301	Iqca	ENSMUST00000212859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026301	Iqca	ENSMUST00000212394	ENSMUSP00000148643	TRANSLATION	protein_coding	-	-	5	857	11	3.58	0	51	0	-4,-5	-	-	17.1	ALTERNATIVE:2
ENSMUSG00000026301	Iqca	ENSMUST00000113094	ENSMUSP00000108717	TRANSLATION	protein_coding	-	CCDS48317.1	5	829	11	4.03	0.5	51	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000026301	Iqca	ENSMUST00000186403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026301	Iqca	ENSMUST00000189011	ENSMUSP00000140367	TRANSLATION	protein_coding	start	-	3	76	7	0.8	0	31.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026301	Iqca	ENSMUST00000211999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026301	Iqca	ENSMUST00000186522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026303	Mlph	ENSMUST00000136220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026303	Mlph	ENSMUST00000027528	ENSMUSP00000027528	TRANSLATION	protein_coding	-	CCDS15155.1	1	590	8	5	1.5	206.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026303	Mlph	ENSMUST00000125149	ENSMUSP00000123314	TRANSLATION	protein_coding	stop	-	2	120	8	2	0	119.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026436	Elk4	ENSMUST00000124579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026436	Elk4	ENSMUST00000146432	ENSMUSP00000118880	TRANSLATION	protein_coding	stop	-	1	306	0	2	0	123.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026436	Elk4	ENSMUST00000146188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026436	Elk4	ENSMUST00000147218	ENSMUSP00000114255	TRANSLATION	nonsense_mediated_decay	start	-	2	290	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026436	Elk4	ENSMUST00000027696	ENSMUSP00000027696	TRANSLATION	protein_coding	-	CCDS35704.1	1	430	0	2	2.7	123.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026436	Elk4	ENSMUST00000131159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026436	Elk4	ENSMUST00000086556	ENSMUSP00000083743	TRANSLATION	protein_coding	-	CCDS35704.1	1	430	0	2	2.7	123.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000098306	Gm28040	ENSMUST00000183489	ENSMUSP00000139189	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	133	0	0	13.3	57.5	4	-3,-5	-	-	-1	ALTERNATIVE:1
ENSMUSG00000098306	Gm28040	ENSMUST00000184603	ENSMUSP00000138922	TRANSLATION	protein_coding,RT	-	-	2	173	0	0	0	57.5	4	-3,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000073616	Cops9	ENSMUST00000097642	ENSMUSP00000095247	TRANSLATION	protein_coding	-	CCDS48325.1	1	57	0	0	13.6	116	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000073616	Cops9	ENSMUST00000154129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073616	Cops9	ENSMUST00000112999	ENSMUSP00000108623	TRANSLATION	protein_coding	-	-	3	100	0	0	0	72.2	0	-4,-5	-	-	3.372	MINOR
ENSMUSG00000073616	Cops9	ENSMUST00000148508	ENSMUSP00000123716	TRANSLATION	nonsense_mediated_decay	start	-	2	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073616	Cops9	ENSMUST00000129730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070942	Il1rl2	ENSMUST00000192551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070942	Il1rl2	ENSMUST00000194296	ENSMUSP00000142248	TRANSLATION	protein_coding	-	CCDS14910.1	1	574	0	4.74	0.5	226	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070942	Il1rl2	ENSMUST00000095020	ENSMUSP00000092630	TRANSLATION	protein_coding	-	CCDS14910.1	1	574	0	4.74	0.5	226	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070942	Il1rl2	ENSMUST00000193388	ENSMUSP00000141507	TRANSLATION	protein_coding	stop	-	1	166	0	1.04	0	33.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034000	Neu4	ENSMUST00000050890	ENSMUSP00000051151	TRANSLATION	protein_coding	-	CCDS15199.1	1	478	3	2.12	1.5	94.1	0	-4,0	-	-	15	PRINCIPAL:3
ENSMUSG00000034000	Neu4	ENSMUST00000190212	ENSMUSP00000140127	TRANSLATION	protein_coding	-	CCDS78660.1	1	501	3	2.12	0.5	94.1	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000039246	Lyplal1	ENSMUST00000195481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039246	Lyplal1	ENSMUST00000045388	ENSMUSP00000048229	TRANSLATION	protein_coding	-	CCDS15600.1	1	239	7	4.8	0.5	144.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000100190	Krtap28-10	ENSMUST00000188323	ENSMUSP00000152836	TRANSLATION	protein_coding	-	-	-	119	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026425	Srgap2	ENSMUST00000185596	ENSMUSP00000141140	TRANSLATION	protein_coding	start	-	5	649	0	11.878	0	199.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000097588	ENSMUSP00000095195	TRANSLATION	protein_coding	-	CCDS48355.1	5	1071	0	15.958	8.8	264.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026425	Srgap2	ENSMUST00000186543	ENSMUSP00000139405	TRANSLATION	protein_coding	-	-	5	858	0	15.958	1	264.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000188770	ENSMUSP00000140910	TRANSLATION	protein_coding	start	-	1	451	0	8.128	0	199.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000190336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026425	Srgap2	ENSMUST00000189893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026425	Srgap2	ENSMUST00000187273	ENSMUSP00000139462	TRANSLATION	protein_coding	stop	-	2	55	0	1	0	52.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000188604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026425	Srgap2	ENSMUST00000187042	ENSMUSP00000140927	TRANSLATION	protein_coding	start	-	5	267	0	2.15	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000189892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026425	Srgap2	ENSMUST00000185445	ENSMUSP00000140787	TRANSLATION	protein_coding	stop	-	5	110	0	2	0	68.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026425	Srgap2	ENSMUST00000188437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026621	Mtarc1	ENSMUST00000189492	ENSMUSP00000139716	TRANSLATION	protein_coding	-	-	5	235	0	0	1.2	174.9	0	-4,-6	-	-	1.71	MINOR
ENSMUSG00000026621	Mtarc1	ENSMUST00000048462	ENSMUSP00000035804	TRANSLATION	protein_coding	-	CCDS69987.1	1	340	0	0	1.5	246.4	1	-2,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000026621	Mtarc1	ENSMUST00000110992	ENSMUSP00000106620	TRANSLATION	protein_coding	-	-	5	342	0	0	0	245.2	1	-2,-5	-	-	5.928	ALTERNATIVE:2
ENSMUSG00000026592	Tex35	ENSMUST00000121911	ENSMUSP00000113622	TRANSLATION	protein_coding	-	CCDS78716.1	5	187	0	0	0.5	306.6	0	-4,-5	-	-	3.258	MINOR
ENSMUSG00000026592	Tex35	ENSMUST00000187546	ENSMUSP00000139460	TRANSLATION	protein_coding	-	-	5	209	0	0	0.5	302.8	0	-4,-5	-	-	3.03	MINOR
ENSMUSG00000026592	Tex35	ENSMUST00000118207	ENSMUSP00000114092	TRANSLATION	protein_coding	-	CCDS48407.1	1	208	0	0	0.5	347.7	0	-4,-5	-	-	5.724	PRINCIPAL:3
ENSMUSG00000026592	Tex35	ENSMUST00000119526	ENSMUSP00000113325	TRANSLATION	protein_coding	-	CCDS78715.1	5	186	0	0	0.5	311.3	0	-4,-5	-	-	3.54	MINOR
ENSMUSG00000026592	Tex35	ENSMUST00000148649	ENSMUSP00000116924	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026592	Tex35	ENSMUST00000027884	ENSMUSP00000027884	TRANSLATION	protein_coding	-	CCDS78718.1	1	207	0	0	0.5	352.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000042699	Dhx9	ENSMUST00000042141	ENSMUSP00000038135	TRANSLATION	protein_coding	-	-	5	1384	12	22.45	0.5	287.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000042699	Dhx9	ENSMUST00000190383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042699	Dhx9	ENSMUST00000189516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042699	Dhx9	ENSMUST00000190544	ENSMUSP00000140764	TRANSLATION	nonsense_mediated_decay	start	-	1	47	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042699	Dhx9	ENSMUST00000189509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042699	Dhx9	ENSMUST00000189425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042699	Dhx9	ENSMUST00000186380	ENSMUSP00000139825	TRANSLATION	protein_coding	-	CCDS78706.1	2	1383	12	22.45	0.5	287.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000042699	Dhx9	ENSMUST00000186966	ENSMUSP00000139806	TRANSLATION	nonsense_mediated_decay	-	-	1	459	9	9.75	0	96.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042699	Dhx9	ENSMUST00000188345	ENSMUSP00000139827	TRANSLATION	protein_coding	stop	-	1	735	12	15.75	0	171.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061816	Myl1	ENSMUST00000150542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061816	Myl1	ENSMUST00000027151	ENSMUSP00000027151	TRANSLATION	protein_coding	-	CCDS15024.1	1	188	5	4.16	0.5	0	0	-4,-6	-	-	11	MINOR
ENSMUSG00000061816	Myl1	ENSMUST00000186346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061816	Myl1	ENSMUST00000186202	ENSMUSP00000140834	TRANSLATION	protein_coding	-	-	5	92	5	2.83	0	0	0	-4,-5	-	-	8.342	MINOR
ENSMUSG00000061816	Myl1	ENSMUST00000151328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061816	Myl1	ENSMUST00000119429	ENSMUSP00000112861	TRANSLATION	protein_coding	-	CCDS48284.1	1	150	5	4.16	19.5	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000061816	Myl1	ENSMUST00000160100	ENSMUSP00000125748	TRANSLATION	protein_coding	stop	-	3	124	0	2.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061816	Myl1	ENSMUST00000120415	ENSMUSP00000112880	TRANSLATION	protein_coding	-	-	1	161	5	3.83	0.5	0	0	-4,-5	-	-	10.34	MINOR
ENSMUSG00000026567	Adcy10	ENSMUST00000155216	ENSMUSP00000137744	TRANSLATION	nonsense_mediated_decay	-	-	5	98	2	2.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026567	Adcy10	ENSMUST00000194554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026567	Adcy10	ENSMUST00000111439	ENSMUSP00000107066	TRANSLATION	protein_coding	-	-	5	1609	21	10	1.5	92	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000026567	Adcy10	ENSMUST00000195194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026567	Adcy10	ENSMUST00000194745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026567	Adcy10	ENSMUST00000111440	ENSMUSP00000107067	TRANSLATION	protein_coding	-	-	5	1609	21	10	1.5	92	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000026567	Adcy10	ENSMUST00000193149	ENSMUSP00000141999	TRANSLATION	protein_coding	start	-	5	169	4	3.5	0	41.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026567	Adcy10	ENSMUST00000148550	ENSMUSP00000137959	TRANSLATION	nonsense_mediated_decay	-	-	1	471	7	10	0	92	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026567	Adcy10	ENSMUST00000124037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026567	Adcy10	ENSMUST00000027852	ENSMUSP00000027852	TRANSLATION	protein_coding	-	CCDS35756.1	1	1614	21	10	0.5	92	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000025995	Wdr75	ENSMUST00000027139	ENSMUSP00000027139	TRANSLATION	protein_coding	-	CCDS14932.1	1	830	0	5.82	6.3	64.6	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000025995	Wdr75	ENSMUST00000186308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025995	Wdr75	ENSMUST00000135662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025995	Wdr75	ENSMUST00000147308	ENSMUSP00000117363	TRANSLATION	protein_coding	stop	-	2	151	0	2.45	0	31	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025995	Wdr75	ENSMUST00000143737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025995	Wdr75	ENSMUST00000186651	ENSMUSP00000140008	TRANSLATION	protein_coding	start	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025995	Wdr75	ENSMUST00000154436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025995	Wdr75	ENSMUST00000146602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025995	Wdr75	ENSMUST00000142145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006412	Pfdn2	ENSMUST00000138323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006412	Pfdn2	ENSMUST00000006579	ENSMUSP00000006579	TRANSLATION	protein_coding	start	-	3	129	0	0	0	75.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006412	Pfdn2	ENSMUST00000135941	ENSMUSP00000120106	TRANSLATION	protein_coding	-	CCDS15491.1	1	154	0	0	8.8	105.6	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000034292	Traf3ip1	ENSMUST00000187588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034292	Traf3ip1	ENSMUST00000047242	ENSMUSP00000042391	TRANSLATION	protein_coding	-	CCDS35664.1	1	625	0	3.55	1.5	677	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000034292	Traf3ip1	ENSMUST00000189341	ENSMUSP00000140151	TRANSLATION	protein_coding	-	-	5	654	0	3.55	1.5	675.1	0	-4,-2	-	-	11.886	ALTERNATIVE:2
ENSMUSG00000026020	Nop58	ENSMUST00000190231	ENSMUSP00000140581	TRANSLATION	protein_coding	stop	-	2	28	0	0.466	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000185772	ENSMUSP00000139474	TRANSLATION	protein_coding	stop	-	3	20	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000188390	ENSMUSP00000139568	TRANSLATION	protein_coding	start/stop	-	5	195	0	3.1336	0	136.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000185368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026020	Nop58	ENSMUST00000186044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026020	Nop58	ENSMUST00000189919	ENSMUSP00000141192	TRANSLATION	nonsense_mediated_decay	start	-	3	146	0	2.244	0	53.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000191142	ENSMUSP00000140250	TRANSLATION	protein_coding	-	CCDS35587.1	1	536	0	7.4376	1.5	364.5	0	-4,-5	-	-	11.202	PRINCIPAL:2
ENSMUSG00000026020	Nop58	ENSMUST00000189327	ENSMUSP00000139517	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0.12	0	80.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000191088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026020	Nop58	ENSMUST00000187837	ENSMUSP00000140038	TRANSLATION	protein_coding	start/stop	-	5	213	0	2.564	0	143.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000189289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026020	Nop58	ENSMUST00000027174	ENSMUSP00000027174	TRANSLATION	protein_coding	-	-	5	444	0	7.8376	0	364.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026020	Nop58	ENSMUST00000190759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026020	Nop58	ENSMUST00000190265	ENSMUSP00000141100	TRANSLATION	nonsense_mediated_decay	start	-	5	191	0	3.82	0	151.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000026020	Nop58	ENSMUST00000187491	ENSMUSP00000140053	TRANSLATION	nonsense_mediated_decay	start	-	5	60	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044854	1700056E22Rik	ENSMUST00000050306	ENSMUSP00000055787	TRANSLATION	protein_coding	-	CCDS56665.1	-	234	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000044854	1700056E22Rik	ENSMUST00000193919	-	NO_TRANSLATION	antisense
ENSMUSG00000100265	Gm28363	ENSMUST00000186341	ENSMUSP00000140366	TRANSLATION	protein_coding	stop	-	5	129	8	3	0	143.8	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000040836	Gpr161	ENSMUST00000178700	ENSMUSP00000136621	TRANSLATION	protein_coding	-	CCDS83621.1	1	545	0	0.96	0.5	155.7	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040836	Gpr161	ENSMUST00000111450	ENSMUSP00000107077	TRANSLATION	protein_coding	-	CCDS78732.1	1	528	0	0.96	3.9	155.7	7	-4,-7	-	-	13	PRINCIPAL:3
ENSMUSG00000026584	Scyl3	ENSMUST00000170359	ENSMUSP00000132109	TRANSLATION	protein_coding	-	CCDS69967.1	5	722	0	4.64	0.5	27.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000026584	Scyl3	ENSMUST00000161908	ENSMUSP00000125735	TRANSLATION	protein_coding	-	CCDS69967.1	1	722	0	4.64	0.5	27.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000026584	Scyl3	ENSMUST00000027876	ENSMUSP00000027876	TRANSLATION	protein_coding	-	CCDS15430.1	1	735	0	4.64	1.5	27.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000026584	Scyl3	ENSMUST00000162920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026584	Scyl3	ENSMUST00000159516	ENSMUSP00000124301	TRANSLATION	protein_coding	start	-	3	60	0	1.1	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000026584	Scyl3	ENSMUST00000163033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026584	Scyl3	ENSMUST00000162234	ENSMUSP00000123704	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067813	Xkr9	ENSMUST00000088542	ENSMUSP00000085900	TRANSLATION	protein_coding	-	CCDS14824.1	1	373	0	0	3.9	283.7	0	-2,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000006304	Arpc2	ENSMUST00000185733	ENSMUSP00000140762	TRANSLATION	protein_coding	stop	-	3	26	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006304	Arpc2	ENSMUST00000006467	ENSMUSP00000006467	TRANSLATION	protein_coding	-	CCDS35612.1	1	300	0	8.08	20.3	347.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006304	Arpc2	ENSMUST00000113820	ENSMUSP00000109451	TRANSLATION	protein_coding	-	CCDS35612.1	1	300	0	8.08	20.3	347.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006304	Arpc2	ENSMUST00000113819	ENSMUSP00000109450	TRANSLATION	protein_coding	-	-	5	284	0	7.396	0	347.1	0	-4,-5	-	-	10.632	MINOR
ENSMUSG00000051285	Pcmtd1	ENSMUST00000061280	ENSMUSP00000059261	TRANSLATION	protein_coding	-	CCDS35508.1	1	357	20	2.48	5.2	103.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182114	ENSMUSP00000138680	TRANSLATION	protein_coding	stop	-	1	87	1	0.92	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051285	Pcmtd1	ENSMUST00000183204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182675	ENSMUSP00000138149	TRANSLATION	nonsense_mediated_decay	start	-	5	52	5	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051285	Pcmtd1	ENSMUST00000182892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018189	Uchl5	ENSMUST00000189936	ENSMUSP00000140106	TRANSLATION	protein_coding	-	CCDS15346.1	1	329	6	10.25	16.3	241.8	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000018189	Uchl5	ENSMUST00000191512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018189	Uchl5	ENSMUST00000189433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018189	Uchl5	ENSMUST00000185539	ENSMUSP00000140681	TRANSLATION	nonsense_mediated_decay	start	-	3	167	2	5	0	66.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018189	Uchl5	ENSMUST00000185493	ENSMUSP00000139668	TRANSLATION	protein_coding	stop	-	3	225	2	7.25	0	100.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018189	Uchl5	ENSMUST00000190258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018189	Uchl5	ENSMUST00000185742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018189	Uchl5	ENSMUST00000018333	ENSMUSP00000018333	TRANSLATION	protein_coding	-	CCDS78699.1	1	328	6	10.25	16.3	241.8	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000025925	Terf1	ENSMUST00000188371	ENSMUSP00000140744	TRANSLATION	protein_coding	-	CCDS14827.1	1	421	0	6.55	1.5	143.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025925	Terf1	ENSMUST00000027057	ENSMUSP00000027057	TRANSLATION	protein_coding	-	CCDS78547.1	1	392	0	5.8	1.5	96.3	0	-4,-5	-	-	7.65	MINOR
ENSMUSG00000025925	Terf1	ENSMUST00000186565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025925	Terf1	ENSMUST00000188684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016179	Camk1g	ENSMUST00000169907	ENSMUSP00000128143	TRANSLATION	protein_coding	-	-	5	359	18	8.75	0	267.3	0	-4,-5	-	-	17.598	MINOR
ENSMUSG00000016179	Camk1g	ENSMUST00000016323	ENSMUSP00000016323	TRANSLATION	protein_coding	-	CCDS15638.1	1	477	18	8.95	5.1	267.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000016179	Camk1g	ENSMUST00000163202	ENSMUSP00000131451	TRANSLATION	protein_coding	start/stop	-	3	252	10	6.71	0	213.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016179	Camk1g	ENSMUST00000165718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033061	Resp18	ENSMUST00000191283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033061	Resp18	ENSMUST00000189203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033061	Resp18	ENSMUST00000186229	ENSMUSP00000140605	TRANSLATION	nonsense_mediated_decay	-	-	1	120	0	0	0	117.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000033061	Resp18	ENSMUST00000039534	ENSMUSP00000043783	TRANSLATION	protein_coding	-	CCDS15069.1	1	175	0	0	1.5	156	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000026213	Stk11ip	ENSMUST00000146575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026213	Stk11ip	ENSMUST00000156838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026213	Stk11ip	ENSMUST00000129652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026213	Stk11ip	ENSMUST00000140963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026213	Stk11ip	ENSMUST00000129794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026213	Stk11ip	ENSMUST00000113553	ENSMUSP00000109182	TRANSLATION	protein_coding	-	CCDS15079.1	1	1072	0	4.5	1.5	141.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026213	Stk11ip	ENSMUST00000150560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026213	Stk11ip	ENSMUST00000027414	ENSMUSP00000027414	TRANSLATION	protein_coding	-	CCDS15079.1	1	1072	0	4.5	1.5	141.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026213	Stk11ip	ENSMUST00000154303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025939	Ube2w	ENSMUST00000133639	ENSMUSP00000121573	TRANSLATION	nonsense_mediated_decay	start	-	5	79	0	2.264	0	48.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025939	Ube2w	ENSMUST00000136455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025939	Ube2w	ENSMUST00000132919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025939	Ube2w	ENSMUST00000182080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025939	Ube2w	ENSMUST00000117146	ENSMUSP00000112741	TRANSLATION	protein_coding	-	-	1	151	0	4.25	15.4	117.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025939	Ube2w	ENSMUST00000182554	ENSMUSP00000138110	TRANSLATION	protein_coding	-	-	1	154	0	2	0	42.6	0	-4,-5	-	-	3.018	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000159070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005763	Cd247	ENSMUST00000187313	ENSMUSP00000140926	TRANSLATION	protein_coding	-	CCDS15443.1	1	206	0	2.25	0.5	111.1	1	1,-2	-	-	10.356	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000161559	ENSMUSP00000124299	TRANSLATION	protein_coding	-	CCDS48428.2	1	188	0	2.25	0.5	111.1	1	1,-2	-	-	10.356	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000005907	ENSMUSP00000005907	TRANSLATION	protein_coding	-	CCDS48427.1	1	164	0	2.25	5.2	138.5	1	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005763	Cd247	ENSMUST00000086002	ENSMUSP00000083165	TRANSLATION	nonsense_mediated_decay	-	-	1	206	0	2.25	0.5	111.1	1	1,-2	-	-	-1	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000162411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005763	Cd247	ENSMUST00000027849	ENSMUSP00000027849	TRANSLATION	protein_coding	-	CCDS15443.1	1	206	0	2.25	0.5	111.1	1	1,-2	-	-	10.356	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000161971	ENSMUSP00000124297	TRANSLATION	protein_coding	-	CCDS48429.1	1	177	0	2.25	0.5	111.1	1	1,-2	-	-	10.356	MINOR
ENSMUSG00000005763	Cd247	ENSMUST00000178336	ENSMUSP00000136456	TRANSLATION	protein_coding	-	-	5	189	0	2.25	0.5	111.1	1	1,-2	-	-	10.356	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000193024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026113	Inpp4a	ENSMUST00000132401	ENSMUSP00000123071	TRANSLATION	protein_coding	-	-	5	972	0	0	4.1	0	0	-4,-2	-	-	1.119	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000140264	ENSMUSP00000121107	TRANSLATION	protein_coding	-	-	1	890	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000193774	ENSMUSP00000142118	TRANSLATION	protein_coding	-	-	5	306	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000058307	ENSMUSP00000057233	TRANSLATION	protein_coding	-	CCDS78570.1	1	679	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000132615	ENSMUSP00000115249	TRANSLATION	protein_coding	-	-	5	954	0	0	9.3	0	0	-4,-2	-	-	3	ALTERNATIVE:1
ENSMUSG00000026113	Inpp4a	ENSMUST00000136846	ENSMUSP00000121518	TRANSLATION	protein_coding	-	-	5	938	0	0	9.1	0	0	-4,-2	-	-	2.928	ALTERNATIVE:1
ENSMUSG00000026113	Inpp4a	ENSMUST00000146676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026113	Inpp4a	ENSMUST00000137266	ENSMUSP00000121803	TRANSLATION	protein_coding	-	CCDS69879.1	5	977	0	0	4.1	0	0	-4,-2	-	-	1.119	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000027287	ENSMUSP00000027287	TRANSLATION	protein_coding	-	CCDS35539.1	5	939	0	0	9.1	0	0	-4,-2	-	-	2.928	PRINCIPAL:2
ENSMUSG00000026113	Inpp4a	ENSMUST00000168546	ENSMUSP00000130443	TRANSLATION	protein_coding	-	-	5	679	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026113	Inpp4a	ENSMUST00000123124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026113	Inpp4a	ENSMUST00000114933	ENSMUSP00000110583	TRANSLATION	protein_coding	-	CCDS35540.1	1	690	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053963	Stum	ENSMUST00000179826	ENSMUSP00000137089	TRANSLATION	protein_coding	-	-	5	141	0	0	6.3	93	2	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000053963	Stum	ENSMUST00000210107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053963	Stum	ENSMUST00000211782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053963	Stum	ENSMUST00000210737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053963	Stum	ENSMUST00000211561	ENSMUSP00000147747	TRANSLATION	protein_coding	-	-	5	138	0	0	6.3	93	2	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000053963	Stum	ENSMUST00000136521	ENSMUSP00000119782	TRANSLATION	protein_coding	-	CCDS48467.1	1	141	0	0	6.3	93	2	-4,-7	-	-	8	PRINCIPAL:2
ENSMUSG00000052331	Ankrd44	ENSMUST00000177919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000177679	ENSMUSP00000137216	TRANSLATION	protein_coding	stop	-	2	126	0	3	0	47.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052331	Ankrd44	ENSMUST00000044359	ENSMUSP00000040327	TRANSLATION	protein_coding	-	-	5	1011	0	20.54	4.2	607.6	0	-4,-5	-	-	13.455	ALTERNATIVE:2
ENSMUSG00000052331	Ankrd44	ENSMUST00000179398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000180327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000178226	ENSMUSP00000136802	TRANSLATION	protein_coding	start/stop	-	5	789	0	15.64	0	476.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052331	Ankrd44	ENSMUST00000179242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000178935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000180189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052331	Ankrd44	ENSMUST00000178685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000178156	ENSMUSP00000136831	TRANSLATION	protein_coding	start	-	3	241	0	3.78	0	115	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000052331	Ankrd44	ENSMUST00000179030	ENSMUSP00000137616	TRANSLATION	protein_coding	-	CCDS35566.2	1	993	0	20.34	7.6	590.5	0	-4,-5	-	-	13.572	PRINCIPAL:2
ENSMUSG00000052331	Ankrd44	ENSMUST00000177704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000189563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052331	Ankrd44	ENSMUST00000178905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026433	Rab29	ENSMUST00000125925	ENSMUSP00000137659	TRANSLATION	nonsense_mediated_decay	-	-	1	46	8	1	0	40.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026433	Rab29	ENSMUST00000187084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026433	Rab29	ENSMUST00000027693	ENSMUSP00000027693	TRANSLATION	protein_coding	-	CCDS15276.1	1	204	19	3.98	8.8	154.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026433	Rab29	ENSMUST00000112386	ENSMUSP00000108005	TRANSLATION	protein_coding	-	CCDS15276.1	1	204	19	3.98	8.8	154.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000010175	Prox1	ENSMUST00000010319	ENSMUSP00000010319	TRANSLATION	protein_coding	-	CCDS35822.1	1	737	0	3	14.8	277.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000010175	Prox1	ENSMUST00000177288	ENSMUSP00000135066	TRANSLATION	protein_coding	-	CCDS35822.1	5	737	0	3	14.8	277.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000010175	Prox1	ENSMUST00000175916	ENSMUSP00000135703	TRANSLATION	protein_coding	-	CCDS35822.1	1	737	0	3	14.8	277.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000026547	Tagln2	ENSMUST00000111230	ENSMUSP00000106861	TRANSLATION	protein_coding	-	CCDS35784.1	1	199	0	3.75	17.3	134	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026547	Tagln2	ENSMUST00000192460	ENSMUSP00000141983	TRANSLATION	protein_coding	stop	-	2	90	0	2	0	43.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026547	Tagln2	ENSMUST00000138296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026547	Tagln2	ENSMUST00000111228	ENSMUSP00000106859	TRANSLATION	protein_coding	-	CCDS35784.1	3	199	0	3.75	17.3	134	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026116	Tmem131	ENSMUST00000190442	ENSMUSP00000140187	TRANSLATION	protein_coding	start/stop	-	3	171	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026116	Tmem131	ENSMUST00000187917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026116	Tmem131	ENSMUST00000027290	ENSMUSP00000027290	TRANSLATION	protein_coding	-	CCDS35538.1	1	1877	0	0	0.5	100.8	1	-1,3	-	-	6	PRINCIPAL:1
ENSMUSG00000026116	Tmem131	ENSMUST00000194563	ENSMUSP00000142307	TRANSLATION	protein_coding	-	CCDS35538.1	5	1877	0	0	0.5	100.8	1	-1,3	-	-	6	PRINCIPAL:1
ENSMUSG00000026116	Tmem131	ENSMUST00000189470	ENSMUSP00000140620	TRANSLATION	protein_coding	start	-	3	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026116	Tmem131	ENSMUST00000185964	ENSMUSP00000141413	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026116	Tmem131	ENSMUST00000191381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026116	Tmem131	ENSMUST00000186486	ENSMUSP00000142080	TRANSLATION	nonsense_mediated_decay	start	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046330	Rpl37a	ENSMUST00000059980	ENSMUSP00000058919	TRANSLATION	protein_coding	-	CCDS35610.1	1	92	4	2.6	16.5	160	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000046330	Rpl37a	ENSMUST00000211963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046330	Rpl37a	ENSMUST00000212432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046330	Rpl37a	ENSMUST00000212335	ENSMUSP00000148267	TRANSLATION	nonsense_mediated_decay	start	-	3	60	4	1.25	0	80.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025952	Crygc	ENSMUST00000027089	ENSMUSP00000027089	TRANSLATION	protein_coding	-	CCDS15012.1	1	174	4	2	8.8	217.7	0	-4,-5	-	-	19	PRINCIPAL:3
ENSMUSG00000025952	Crygc	ENSMUST00000114064	ENSMUSP00000109698	TRANSLATION	protein_coding	-	CCDS35600.1	1	175	4	2	8.8	217.7	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000026404	Ddx59	ENSMUST00000027655	ENSMUSP00000027655	TRANSLATION	protein_coding	-	CCDS15326.1	1	619	14	5.44	1.5	254.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026404	Ddx59	ENSMUST00000122959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026404	Ddx59	ENSMUST00000129218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026404	Ddx59	ENSMUST00000149783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070871	Ccnyl1	ENSMUST00000187638	ENSMUSP00000139790	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070871	Ccnyl1	ENSMUST00000187170	ENSMUSP00000139498	TRANSLATION	protein_coding	-	CCDS48281.1	5	291	0	0	2.7	58	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000070871	Ccnyl1	ENSMUST00000114077	ENSMUSP00000109711	TRANSLATION	protein_coding	-	-	1	367	0	0	1	58	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000070871	Ccnyl1	ENSMUST00000094898	ENSMUSP00000092499	TRANSLATION	protein_coding	-	CCDS48281.1	5	291	0	0	2.7	58	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000187525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000188598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000189010	ENSMUSP00000140413	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000186694	ENSMUSP00000140132	TRANSLATION	protein_coding	-	CCDS14920.1	1	860	3	0	2.8	274.9	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000188728	ENSMUSP00000140169	TRANSLATION	protein_coding	stop	-	3	254	0	0	0	28.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000095014	ENSMUSP00000092624	TRANSLATION	protein_coding	-	CCDS14920.1	1	860	3	0	2.8	274.9	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000190427	ENSMUSP00000140384	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000070939	Tgfbrap1	ENSMUST00000187872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059956	Serpinb12	ENSMUST00000081277	ENSMUSP00000080030	TRANSLATION	protein_coding	-	CCDS15212.1	1	423	0	5.84	1.5	451.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059956	Serpinb12	ENSMUST00000112724	ENSMUSP00000108344	TRANSLATION	protein_coding	-	CCDS15212.1	1	423	0	5.84	1.5	451.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059956	Serpinb12	ENSMUST00000126812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032997	Chpf	ENSMUST00000138683	ENSMUSP00000117253	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000032997	Chpf	ENSMUST00000079205	ENSMUSP00000078199	TRANSLATION	protein_coding	-	CCDS15074.1	1	774	0	0	6.5	503.5	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032997	Chpf	ENSMUST00000094818	ENSMUSP00000092412	TRANSLATION	protein_coding	-	CCDS15075.1	1	612	0	0	2.7	503.5	0	-4,-5	-	-	6.618	MINOR
ENSMUSG00000032997	Chpf	ENSMUST00000143496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032997	Chpf	ENSMUST00000124042	ENSMUSP00000122057	TRANSLATION	nonsense_mediated_decay	-	-	5	113	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000026354	Lct	ENSMUST00000073490	ENSMUSP00000073190	TRANSLATION	protein_coding	-	CCDS35698.1	2	1931	23	7.6	0.5	1809	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026354	Lct	ENSMUST00000162067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038242	Aox4	ENSMUST00000040442	ENSMUSP00000048929	TRANSLATION	protein_coding	-	CCDS14970.1	1	1336	72	31.35	1.7	1073.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038242	Aox4	ENSMUST00000161926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038242	Aox4	ENSMUST00000161833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038242	Aox4	ENSMUST00000189059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038242	Aox4	ENSMUST00000159240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058407	Txndc9	ENSMUST00000193832	ENSMUSP00000142188	TRANSLATION	protein_coding	-	-	2	188	0	1.98	1.2	40.2	0	-4,-5	-	-	12.08	ALTERNATIVE:2
ENSMUSG00000058407	Txndc9	ENSMUST00000195247	ENSMUSP00000141609	TRANSLATION	protein_coding	-	CCDS14898.1	1	226	0	1.98	3.5	40.2	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000058407	Txndc9	ENSMUST00000194692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058407	Txndc9	ENSMUST00000192237	ENSMUSP00000141640	TRANSLATION	protein_coding	stop	-	3	169	0	1.68	0	40.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058407	Txndc9	ENSMUST00000194747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058407	Txndc9	ENSMUST00000162031	ENSMUSP00000125491	TRANSLATION	protein_coding	-	CCDS14898.1	1	226	0	1.98	3.5	40.2	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000058407	Txndc9	ENSMUST00000192960	ENSMUSP00000141281	TRANSLATION	protein_coding	-	-	3	141	0	0.88	0	0	0	-4,-5	-	-	2.664	MINOR
ENSMUSG00000058407	Txndc9	ENSMUST00000195032	ENSMUSP00000141595	TRANSLATION	protein_coding	-	CCDS14898.1	2	226	0	1.98	3.5	40.2	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000051223	Bzw1	ENSMUST00000188630	ENSMUSP00000140898	TRANSLATION	nonsense_mediated_decay	-	-	5	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051223	Bzw1	ENSMUST00000186949	ENSMUSP00000140319	TRANSLATION	protein_coding	-	-	5	451	0	1.438	6.4	73.2	0	-4,0	-	-	13.168	MINOR
ENSMUSG00000051223	Bzw1	ENSMUST00000050552	ENSMUSP00000051935	TRANSLATION	protein_coding	-	CCDS14971.1	1	419	0	1.438	19.5	73.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051223	Bzw1	ENSMUST00000188898	ENSMUSP00000139761	TRANSLATION	protein_coding	stop	-	5	253	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026457	Adipor1	ENSMUST00000027727	ENSMUSP00000027727	TRANSLATION	protein_coding	-	CCDS15309.1	1	375	0	5	8.8	245.7	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026457	Adipor1	ENSMUST00000156433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026457	Adipor1	ENSMUST00000148822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026457	Adipor1	ENSMUST00000112237	ENSMUSP00000107856	TRANSLATION	protein_coding	-	CCDS15309.1	1	375	0	5	8.8	245.7	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000093805	Gal3st2b	ENSMUST00000178757	ENSMUSP00000136012	TRANSLATION	protein_coding	-	CCDS56641.1	1	394	0	0	0.5	494.8	2	-1,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000093805	Gal3st2b	ENSMUST00000177958	ENSMUSP00000136311	TRANSLATION	protein_coding	-	-	1	396	0	0	2.7	493.1	2	-1,-5	-	-	5.898	ALTERNATIVE:2
ENSMUSG00000025927	Tfap2b	ENSMUST00000064976	ENSMUSP00000064488	TRANSLATION	protein_coding	-	CCDS14840.1	1	441	0	0	5.1	294.5	0	-4,-2	-	-	7.617	MINOR
ENSMUSG00000025927	Tfap2b	ENSMUST00000187754	ENSMUSP00000140213	TRANSLATION	protein_coding	-	CCDS78553.1	1	453	0	0	3.9	294.5	0	-4,-6	-	-	7.146	MINOR
ENSMUSG00000025927	Tfap2b	ENSMUST00000191068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025927	Tfap2b	ENSMUST00000027059	ENSMUSP00000027059	TRANSLATION	protein_coding	-	CCDS14839.1	1	459	0	0	8.6	294.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000025927	Tfap2b	ENSMUST00000186972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026043	Col3a1	ENSMUST00000186021	ENSMUSP00000139802	TRANSLATION	protein_coding	start/stop	-	3	245	5	4.33	0	268.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026043	Col3a1	ENSMUST00000087883	ENSMUSP00000085192	TRANSLATION	protein_coding	-	CCDS35554.1	1	1464	5	33.965	1.5	592.7	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000026043	Col3a1	ENSMUST00000185687	ENSMUSP00000139894	TRANSLATION	protein_coding	start/stop	-	5	195	0	5.91	0	65.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026043	Col3a1	ENSMUST00000123204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026043	Col3a1	ENSMUST00000129611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026043	Col3a1	ENSMUST00000190943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026043	Col3a1	ENSMUST00000189818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025979	Mob4	ENSMUST00000159743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025979	Mob4	ENSMUST00000162364	ENSMUSP00000125415	TRANSLATION	protein_coding	-	CCDS14960.1	1	225	4	3.126	21.5	115.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025979	Mob4	ENSMUST00000159311	ENSMUSP00000124790	TRANSLATION	protein_coding	-	CCDS78585.1	3	204	4	2.808	4.1	115.8	0	-4,-7	-	-	15.968	MINOR
ENSMUSG00000025979	Mob4	ENSMUST00000162553	ENSMUSP00000124151	TRANSLATION	protein_coding	stop	-	5	186	4	2.706	0	115.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025979	Mob4	ENSMUST00000162930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025979	Mob4	ENSMUST00000187422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025979	Mob4	ENSMUST00000161122	ENSMUSP00000124981	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0.618	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025979	Mob4	ENSMUST00000027122	ENSMUSP00000027122	TRANSLATION	protein_coding	start	-	3	183	4	2.508	0	83.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062580	Timm17a	ENSMUST00000152706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062580	Timm17a	ENSMUST00000134088	ENSMUSP00000119555	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	92.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062580	Timm17a	ENSMUST00000125454	ENSMUSP00000119770	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062580	Timm17a	ENSMUST00000081104	ENSMUSP00000079883	TRANSLATION	protein_coding	-	CCDS15318.1	1	171	0	0	8.8	101.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026021	Sumo1	ENSMUST00000091374	ENSMUSP00000088935	TRANSLATION	protein_coding	-	CCDS35586.1	1	101	0	3	21.5	114.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026021	Sumo1	ENSMUST00000185265	ENSMUSP00000140729	TRANSLATION	protein_coding	-	-	3	75	0	2.25	0	37.4	0	-4,-5	-	-	5.898	MINOR
ENSMUSG00000026021	Sumo1	ENSMUST00000191158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026021	Sumo1	ENSMUST00000123857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020423	Btg2	ENSMUST00000020692	ENSMUSP00000020692	TRANSLATION	protein_coding	-	CCDS15302.1	1	158	0	2	3.9	142.7	0	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000036574	Tex44	ENSMUST00000046004	ENSMUSP00000136430	TRANSLATION	protein_coding	-	CCDS56635.1	-	530	0	0	0.5	320.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026074	Map4k4	ENSMUST00000191657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026074	Map4k4	ENSMUST00000192355	ENSMUSP00000141956	TRANSLATION	protein_coding	start/stop	-	3	237	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000195860	ENSMUSP00000141400	TRANSLATION	protein_coding	-	CCDS78573.1	1	1288	19	9.128	2.7	409.9	0	-4,-5	-	-	18.694	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000191865	ENSMUSP00000141573	TRANSLATION	protein_coding	start/stop	-	3	236	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000195259	ENSMUSP00000142056	TRANSLATION	protein_coding	-	CCDS78575.1	1	1208	19	9.128	3.9	409.9	0	-4,-5	-	-	19.184	ALTERNATIVE:2
ENSMUSG00000026074	Map4k4	ENSMUST00000191761	ENSMUSP00000141332	TRANSLATION	protein_coding	stop	-	2	404	19	8.93	0	212.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000193661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026074	Map4k4	ENSMUST00000192884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026074	Map4k4	ENSMUST00000192194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026074	Map4k4	ENSMUST00000193682	ENSMUSP00000141862	TRANSLATION	protein_coding	-	CCDS78576.1	1	1221	19	9.128	3.9	409.9	0	-4,-5	-	-	19.184	ALTERNATIVE:2
ENSMUSG00000026074	Map4k4	ENSMUST00000192509	ENSMUSP00000141665	TRANSLATION	protein_coding	-	CCDS35546.1	2	1234	19	9.128	3.9	409.9	0	-4,-5	-	-	19.184	PRINCIPAL:3
ENSMUSG00000026074	Map4k4	ENSMUST00000191964	ENSMUSP00000141235	TRANSLATION	protein_coding	start/stop	-	3	209	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000194163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026074	Map4k4	ENSMUST00000193514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026074	Map4k4	ENSMUST00000195636	ENSMUSP00000141613	TRANSLATION	protein_coding	-	-	5	1272	19	9.128	3.9	409.9	0	-4,-5	-	-	19.184	ALTERNATIVE:2
ENSMUSG00000026074	Map4k4	ENSMUST00000163854	ENSMUSP00000126961	TRANSLATION	protein_coding	-	-	5	1288	19	9.128	2.7	409.9	0	-4,-5	-	-	18.694	MINOR
ENSMUSG00000026074	Map4k4	ENSMUST00000168431	ENSMUSP00000129796	TRANSLATION	protein_coding	-	-	5	1238	19	9.128	5.9	409.9	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000026074	Map4k4	ENSMUST00000195356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096094	A630095N17Rik	ENSMUST00000180101	ENSMUSP00000135937	TRANSLATION	protein_coding	-	CCDS56634.1	3	116	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000096094	A630095N17Rik	ENSMUST00000191271	ENSMUSP00000140071	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096094	A630095N17Rik	ENSMUST00000179573	ENSMUSP00000136333	TRANSLATION	protein_coding	-	CCDS56633.1	1	78	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000026017	Carf	ENSMUST00000124986	ENSMUSP00000121293	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026017	Carf	ENSMUST00000150008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026017	Carf	ENSMUST00000027171	ENSMUSP00000027171	TRANSLATION	protein_coding	-	CCDS78592.1	1	654	0	0	0.5	200.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000026017	Carf	ENSMUST00000186107	ENSMUSP00000139554	TRANSLATION	nonsense_mediated_decay	-	-	1	255	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026017	Carf	ENSMUST00000180952	ENSMUSP00000137825	TRANSLATION	protein_coding	-	CCDS14989.1	1	689	0	0	0.5	200.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000026017	Carf	ENSMUST00000191232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026017	Carf	ENSMUST00000187978	ENSMUSP00000141169	TRANSLATION	protein_coding	-	CCDS14989.1	1	689	0	0	0.5	200.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000026017	Carf	ENSMUST00000130075	ENSMUSP00000137867	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026017	Carf	ENSMUST00000132949	ENSMUSP00000139878	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026017	Carf	ENSMUST00000186779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033124	Atg9a	ENSMUST00000188347	ENSMUSP00000139731	TRANSLATION	protein_coding	-	CCDS35622.1	5	839	0	0	8.8	436.7	3	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000033124	Atg9a	ENSMUST00000189702	ENSMUSP00000139641	TRANSLATION	protein_coding	-	CCDS35622.1	5	839	0	0	8.8	436.7	3	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000033124	Atg9a	ENSMUST00000239085	ENSMUSP00000159170	TRANSLATION	nonsense_mediated_decay	-	-	-	551	0	0	0	315.7	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000033124	Atg9a	ENSMUST00000189820	ENSMUSP00000139608	TRANSLATION	protein_coding	start	-	2	847	0	0	0	436.7	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000033124	Atg9a	ENSMUST00000040689	ENSMUSP00000047449	TRANSLATION	protein_coding	-	CCDS35622.1	1	839	0	0	8.8	436.7	3	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000033124	Atg9a	ENSMUST00000189665	ENSMUSP00000140012	TRANSLATION	nonsense_mediated_decay	-	-	1	176	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000033124	Atg9a	ENSMUST00000187785	ENSMUSP00000139828	TRANSLATION	protein_coding	start/stop	-	3	278	0	0	0	129.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033124	Atg9a	ENSMUST00000188430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033124	Atg9a	ENSMUST00000187601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033124	Atg9a	ENSMUST00000186744	ENSMUSP00000140616	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000191544	ENSMUSP00000139674	TRANSLATION	protein_coding	stop	-	3	155	7	4.58	0	137.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000186008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026341	Actr3	ENSMUST00000189192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026341	Actr3	ENSMUST00000185280	ENSMUSP00000140082	TRANSLATION	protein_coding	stop	-	5	70	1	2.25	0	61.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000188497	ENSMUSP00000140535	TRANSLATION	protein_coding	stop	-	3	216	13	6.41	0	185	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000178474	ENSMUSP00000137503	TRANSLATION	protein_coding	-	CCDS15242.1	1	418	23	11.49	19.5	192.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026341	Actr3	ENSMUST00000188362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026341	Actr3	ENSMUST00000191004	ENSMUSP00000140953	TRANSLATION	protein_coding	stop	-	5	129	6	3.83	0	111.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000027579	ENSMUSP00000027579	TRANSLATION	protein_coding	-	CCDS15242.1	5	418	23	11.49	19.5	192.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026341	Actr3	ENSMUST00000191578	ENSMUSP00000139886	TRANSLATION	nonsense_mediated_decay	-	-	5	41	6	1	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000187460	ENSMUSP00000140000	TRANSLATION	protein_coding	stop	-	2	161	8	4.83	0	131.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026341	Actr3	ENSMUST00000188827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117091	Gm5698	ENSMUST00000178317	ENSMUSP00000156551	TRANSLATION	protein_coding	-	-	-	241	0	0.8	0	72.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026110	Mgat4a	ENSMUST00000195598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026110	Mgat4a	ENSMUST00000154819	ENSMUSP00000121181	TRANSLATION	protein_coding	-	CCDS69882.1	1	526	0	0	2.7	452.2	0	-1,-5	-	-	6.532	MINOR
ENSMUSG00000026110	Mgat4a	ENSMUST00000143636	ENSMUSP00000122909	TRANSLATION	protein_coding	-	-	1	397	0	0	0	407	0	-4,-6	-	-	3.288	MINOR
ENSMUSG00000026110	Mgat4a	ENSMUST00000148047	ENSMUSP00000118692	TRANSLATION	protein_coding	stop	-	3	112	0	0	0	170.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026110	Mgat4a	ENSMUST00000194660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026110	Mgat4a	ENSMUST00000042161	ENSMUSP00000038894	TRANSLATION	protein_coding	-	CCDS14893.1	1	535	0	0	13.8	452.2	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026110	Mgat4a	ENSMUST00000149791	ENSMUSP00000115778	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0	0	52.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026110	Mgat4a	ENSMUST00000151952	ENSMUSP00000114175	TRANSLATION	protein_coding	-	CCDS14893.1	1	535	0	0	13.8	452.2	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026600	Soat1	ENSMUST00000188027	ENSMUSP00000141074	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026600	Soat1	ENSMUST00000051396	ENSMUSP00000058344	TRANSLATION	protein_coding	-	CCDS35743.1	1	540	0	0	0.5	229.7	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026600	Soat1	ENSMUST00000187073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026600	Soat1	ENSMUST00000186420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026600	Soat1	ENSMUST00000189661	ENSMUSP00000140721	TRANSLATION	protein_coding	-	CCDS35743.1	1	540	0	0	0.5	229.7	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026600	Soat1	ENSMUST00000187507	ENSMUSP00000139431	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	23	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000026600	Soat1	ENSMUST00000191379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026600	Soat1	ENSMUST00000187987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026125	Prss39	ENSMUST00000027299	ENSMUSP00000027299	TRANSLATION	protein_coding	-	CCDS14868.1	1	367	5	3.04	0.5	173.8	0	1,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000026125	Prss39	ENSMUST00000191604	ENSMUSP00000140460	TRANSLATION	nonsense_mediated_decay	-	-	3	114	3	1	0	47.8	0	1,-1	-	-	-1	MINOR
ENSMUSG00000026544	Dusp23	ENSMUST00000027826	ENSMUSP00000027826	TRANSLATION	protein_coding	-	CCDS15518.1	1	150	10	2	9.6	47.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000028017	ENSMUSP00000028017	TRANSLATION	protein_coding	-	CCDS15420.1	1	698	41	2.59	6.3	138.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000159255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000176689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000195027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000176220	ENSMUSP00000135879	TRANSLATION	protein_coding	start/stop	-	5	239	24	1.04	0	22.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000159817	ENSMUSP00000124267	TRANSLATION	nonsense_mediated_decay	-	-	5	234	17	1.57	0	54.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000161760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026694	Eef1aknmt	ENSMUST00000159316	ENSMUSP00000135822	TRANSLATION	nonsense_mediated_decay	start	-	3	189	16	1.5	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079330	Lemd1	ENSMUST00000189086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079330	Lemd1	ENSMUST00000112357	ENSMUSP00000107976	TRANSLATION	protein_coding	-	CCDS35705.1	1	129	0	0	0.5	69	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000079330	Lemd1	ENSMUST00000185223	ENSMUSP00000157727	TRANSLATION	protein_coding	-	-	3	33	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079330	Lemd1	ENSMUST00000189062	ENSMUSP00000157882	TRANSLATION	protein_coding	-	-	1	33	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079330	Lemd1	ENSMUST00000188169	ENSMUSP00000140524	TRANSLATION	protein_coding	-	CCDS83590.1	1	101	0	0	0.5	69	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079330	Lemd1	ENSMUST00000185436	ENSMUSP00000140418	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079330	Lemd1	ENSMUST00000191418	ENSMUSP00000140193	TRANSLATION	protein_coding	-	CCDS78679.1	2	203	0	0	0.5	69	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079330	Lemd1	ENSMUST00000187339	ENSMUSP00000139708	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038776	Ephx1	ENSMUST00000147585	ENSMUSP00000122671	TRANSLATION	protein_coding	stop	-	3	130	0	1.81	0	83.6	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000038776	Ephx1	ENSMUST00000111068	ENSMUSP00000106697	TRANSLATION	protein_coding	-	CCDS83653.1	1	441	0	6.59	0.5	115	0	-2,-5	-	-	5.73	MINOR
ENSMUSG00000038776	Ephx1	ENSMUST00000036928	ENSMUSP00000047551	TRANSLATION	protein_coding	-	CCDS15579.1	1	455	0	6.94	3.9	207.8	0	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038776	Ephx1	ENSMUST00000154133	ENSMUSP00000114363	TRANSLATION	protein_coding	start/stop	-	5	247	0	4.77	0	92.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026344	Lypd1	ENSMUST00000161361	ENSMUSP00000124265	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026344	Lypd1	ENSMUST00000159529	ENSMUSP00000123824	TRANSLATION	protein_coding	-	CCDS78672.1	2	89	0	0	2.9	0	0	-4,-6	-	-	0.582	MINOR
ENSMUSG00000026344	Lypd1	ENSMUST00000162899	ENSMUSP00000125158	TRANSLATION	protein_coding	-	CCDS78672.1	1	89	0	0	2.9	0	0	-4,-6	-	-	0.582	MINOR
ENSMUSG00000026344	Lypd1	ENSMUST00000159417	ENSMUSP00000125149	TRANSLATION	protein_coding	-	CCDS15243.1	1	141	0	0	10.8	0	0	3,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000026344	Lypd1	ENSMUST00000027582	ENSMUSP00000027582	TRANSLATION	protein_coding	-	CCDS78672.1	1	89	0	0	2.9	0	0	-4,-6	-	-	0.582	MINOR
ENSMUSG00000036104	Rab3gap1	ENSMUST00000186865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036104	Rab3gap1	ENSMUST00000189259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036104	Rab3gap1	ENSMUST00000142662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036104	Rab3gap1	ENSMUST00000131884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036104	Rab3gap1	ENSMUST00000212506	ENSMUSP00000148357	TRANSLATION	protein_coding	-	-	5	988	0	0	4.1	225.7	0	-4,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000036104	Rab3gap1	ENSMUST00000150945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036104	Rab3gap1	ENSMUST00000037649	ENSMUSP00000042070	TRANSLATION	protein_coding	-	CCDS15249.1	1	981	0	0	2.9	225.7	0	-4,-5	-	-	6.613	PRINCIPAL:2
ENSMUSG00000048174	Tmem81	ENSMUST00000058167	ENSMUSP00000062565	TRANSLATION	protein_coding	-	CCDS15287.1	1	259	0	0	0.5	0	2	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000048174	Tmem81	ENSMUST00000188789	ENSMUSP00000139911	TRANSLATION	protein_coding	-	CCDS15287.1	-	259	0	0	0.5	0	2	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000026205	Slc23a3	ENSMUST00000188080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026205	Slc23a3	ENSMUST00000027405	ENSMUSP00000027405	TRANSLATION	protein_coding	-	CCDS15062.1	1	611	0	0	1.5	322	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026398	Nr5a2	ENSMUST00000195428	ENSMUSP00000141645	TRANSLATION	protein_coding	stop	-	5	136	8	2.75	0	112.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026398	Nr5a2	ENSMUST00000192587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026398	Nr5a2	ENSMUST00000168126	ENSMUSP00000129071	TRANSLATION	protein_coding	-	CCDS48382.1	5	499	8	6.75	0.5	227.3	0	-4,-5	-	-	18	MINOR
ENSMUSG00000026398	Nr5a2	ENSMUST00000027649	ENSMUSP00000027649	TRANSLATION	protein_coding	-	CCDS15328.1	1	560	8	6.75	1.5	227.3	0	-4,-5	-	-	18.174	MINOR
ENSMUSG00000026398	Nr5a2	ENSMUST00000192929	ENSMUSP00000141495	TRANSLATION	protein_coding	-	CCDS48382.1	1	499	8	6.75	0.5	227.3	0	-4,-5	-	-	18	MINOR
ENSMUSG00000026398	Nr5a2	ENSMUST00000192357	ENSMUSP00000142219	TRANSLATION	protein_coding	-	-	5	539	8	6.75	9.6	227.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035131	Brinp3	ENSMUST00000132847	ENSMUSP00000118552	TRANSLATION	protein_coding	stop	-	5	250	0	0	0	35.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000035131	Brinp3	ENSMUST00000128345	ENSMUSP00000116763	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000035131	Brinp3	ENSMUST00000125331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035131	Brinp3	ENSMUST00000074622	ENSMUSP00000074201	TRANSLATION	protein_coding	-	CCDS15351.1	1	766	0	0	14.8	35.6	0	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000035131	Brinp3	ENSMUST00000166814	ENSMUSP00000126074	TRANSLATION	protein_coding	-	CCDS15351.1	1	766	0	0	14.8	35.6	0	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000026610	Esrrg	ENSMUST00000110939	ENSMUSP00000106564	TRANSLATION	protein_coding	-	CCDS56666.1	1	435	27	6	6.3	218.1	0	-4,-5	-	-	19.623	MINOR
ENSMUSG00000026610	Esrrg	ENSMUST00000127489	ENSMUSP00000119286	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026610	Esrrg	ENSMUST00000152927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026610	Esrrg	ENSMUST00000027906	ENSMUSP00000027906	TRANSLATION	protein_coding	-	CCDS15606.1	1	458	27	6	10.8	218.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026610	Esrrg	ENSMUST00000110938	ENSMUSP00000106563	TRANSLATION	protein_coding	-	CCDS56666.1	1	435	27	6	6.3	218.1	0	-4,-5	-	-	19.623	MINOR
ENSMUSG00000026109	Tmeff2	ENSMUST00000081851	ENSMUSP00000080533	TRANSLATION	protein_coding	-	CCDS14939.1	1	374	0	3.56	8.8	76.1	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026109	Tmeff2	ENSMUST00000186103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026109	Tmeff2	ENSMUST00000114565	ENSMUSP00000110212	TRANSLATION	protein_coding	-	-	1	262	0	1.4	0	39.1	1	-2,-5	-	-	4.764	MINOR
ENSMUSG00000026109	Tmeff2	ENSMUST00000139157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033544	Angptl1	ENSMUST00000111720	ENSMUSP00000107349	TRANSLATION	protein_coding	-	-	1	323	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000033544	Angptl1	ENSMUST00000027885	ENSMUSP00000027885	TRANSLATION	protein_coding	-	CCDS15397.1	1	490	9	3	7.8	245.5	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000007097	Atp1a2	ENSMUST00000085913	ENSMUSP00000083077	TRANSLATION	protein_coding	-	CCDS35782.1	1	1020	26	20.88	11	474.8	9	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000007097	Atp1a2	ENSMUST00000131751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007097	Atp1a2	ENSMUST00000097464	ENSMUSP00000095072	TRANSLATION	protein_coding	-	-	5	947	26	18.55	0	424.7	7	-4,-6	-	-	10.332	MINOR
ENSMUSG00000007097	Atp1a2	ENSMUST00000191781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007097	Atp1a2	ENSMUST00000137679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026049	Tex30	ENSMUST00000143327	ENSMUSP00000118446	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000147571	ENSMUSP00000114624	TRANSLATION	protein_coding	-	CCDS48249.1	1	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000125540	ENSMUSP00000121385	TRANSLATION	protein_coding	stop	-	5	96	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000027215	ENSMUSP00000027215	TRANSLATION	protein_coding	-	CCDS48249.1	1	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000128190	ENSMUSP00000117565	TRANSLATION	protein_coding	-	CCDS48249.1	1	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000152239	ENSMUSP00000114991	TRANSLATION	protein_coding	-	CCDS48249.1	1	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000127923	ENSMUSP00000122203	TRANSLATION	protein_coding	stop	-	5	69	2	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000129702	ENSMUSP00000115464	TRANSLATION	protein_coding	stop	-	3	77	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000149502	ENSMUSP00000115939	TRANSLATION	protein_coding	stop	-	5	88	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000150911	ENSMUSP00000120928	TRANSLATION	protein_coding	-	CCDS48249.1	2	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000133677	ENSMUSP00000115068	TRANSLATION	protein_coding	-	CCDS48249.1	1	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026049	Tex30	ENSMUST00000147661	ENSMUSP00000119648	TRANSLATION	protein_coding	stop	-	3	71	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026049	Tex30	ENSMUST00000156392	ENSMUSP00000121035	TRANSLATION	protein_coding	-	CCDS48249.1	5	225	6	0	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033557	Fam20b	ENSMUST00000188941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033557	Fam20b	ENSMUST00000147931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033557	Fam20b	ENSMUST00000086153	ENSMUSP00000083322	TRANSLATION	protein_coding	-	CCDS15395.1	1	409	13	4.465	14.8	287.4	0	1,-4	-	-	22	PRINCIPAL:1
ENSMUSG00000033557	Fam20b	ENSMUST00000122424	ENSMUSP00000112534	TRANSLATION	protein_coding	-	CCDS15395.1	5	409	13	4.465	14.8	287.4	0	1,-4	-	-	22	PRINCIPAL:1
ENSMUSG00000033557	Fam20b	ENSMUST00000190878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055033	Olfr420	ENSMUST00000068403	ENSMUSP00000069662	TRANSLATION	protein_coding	-	CCDS15539.1	-	321	0	0.42	3.9	198.8	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000055033	Olfr420	ENSMUST00000213748	ENSMUSP00000149052	TRANSLATION	protein_coding	-	CCDS15539.1	5	321	0	0.42	3.9	198.8	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000016529	Il10	ENSMUST00000016673	ENSMUSP00000016673	TRANSLATION	protein_coding	-	CCDS15265.1	1	178	0	4.5	1.5	332	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026553	Copa	ENSMUST00000152403	ENSMUSP00000123214	TRANSLATION	nonsense_mediated_decay	start	-	3	143	0	3.25	0	27.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026553	Copa	ENSMUST00000122845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026553	Copa	ENSMUST00000027833	ENSMUSP00000027833	TRANSLATION	protein_coding	-	-	5	1233	0	29.5	4.8	1231.3	0	-4,-7	-	-	12.366	MINOR
ENSMUSG00000026553	Copa	ENSMUST00000133909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026553	Copa	ENSMUST00000150298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026553	Copa	ENSMUST00000135192	ENSMUSP00000118179	TRANSLATION	protein_coding	-	CCDS35780.1	1	1224	0	29.5	11.8	1242.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000026553	Copa	ENSMUST00000124289	ENSMUSP00000118899	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	1.59	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026553	Copa	ENSMUST00000126634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026553	Copa	ENSMUST00000138407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026553	Copa	ENSMUST00000142765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005674	Tomm40l	ENSMUST00000143405	ENSMUSP00000137963	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005674	Tomm40l	ENSMUST00000138184	ENSMUSP00000115877	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	55.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005674	Tomm40l	ENSMUST00000005817	ENSMUSP00000005817	TRANSLATION	protein_coding	-	CCDS15481.1	1	308	0	0	9.5	219.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000005674	Tomm40l	ENSMUST00000130529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005674	Tomm40l	ENSMUST00000154106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005674	Tomm40l	ENSMUST00000111326	ENSMUSP00000106958	TRANSLATION	protein_coding	-	-	5	274	0	0	2.4	187.5	0	-4,-2	-	-	4.593	MINOR
ENSMUSG00000005674	Tomm40l	ENSMUST00000147246	ENSMUSP00000119006	TRANSLATION	protein_coding	stop	-	5	95	0	0	0	45.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005674	Tomm40l	ENSMUST00000111327	ENSMUSP00000106959	TRANSLATION	protein_coding	-	CCDS15481.1	1	308	0	0	9.5	219.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000048096	Lmod1	ENSMUST00000059352	ENSMUSP00000061597	TRANSLATION	protein_coding	-	CCDS35718.1	1	595	0	1.13	0.5	87.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026312	Cdh7	ENSMUST00000137092	ENSMUSP00000139465	TRANSLATION	protein_coding	-	-	1	76	2	0.6	0	0	0	2,-2	-	-	0	MINOR
ENSMUSG00000026312	Cdh7	ENSMUST00000134301	ENSMUSP00000123394	TRANSLATION	protein_coding	start	-	1	179	5	1.8	0	55.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026312	Cdh7	ENSMUST00000027542	ENSMUSP00000027542	TRANSLATION	protein_coding	-	CCDS15221.1	1	785	54	9.85	12.8	466.5	1	2,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000026312	Cdh7	ENSMUST00000145188	ENSMUSP00000120231	TRANSLATION	protein_coding	stop	-	3	67	2	0.6	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026312	Cdh7	ENSMUST00000172005	ENSMUSP00000129715	TRANSLATION	protein_coding	-	CCDS15221.1	1	785	54	9.85	12.8	466.5	1	2,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000026312	Cdh7	ENSMUST00000112701	ENSMUSP00000108321	TRANSLATION	protein_coding	-	CCDS15221.1	5	785	54	9.85	12.8	466.5	1	2,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000026312	Cdh7	ENSMUST00000131464	ENSMUSP00000138046	TRANSLATION	nonsense_mediated_decay	-	-	1	73	2	0.6	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026312	Cdh7	ENSMUST00000129923	ENSMUSP00000140966	TRANSLATION	protein_coding	-	-	1	76	2	0.6	0	0	0	2,-2	-	-	0	MINOR
ENSMUSG00000026312	Cdh7	ENSMUST00000146282	ENSMUSP00000140650	TRANSLATION	protein_coding	-	-	3	76	2	0.6	0	0	0	2,-2	-	-	0	MINOR
ENSMUSG00000058981	Olfr1406	ENSMUST00000072395	ENSMUSP00000072231	TRANSLATION	protein_coding	-	CCDS15523.1	-	310	0	0.36	4	183.7	7	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000058981	Olfr1406	ENSMUST00000201132	ENSMUSP00000144530	TRANSLATION	protein_coding	-	CCDS15523.1	3	310	0	0.36	4	183.7	7	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000058981	Olfr1406	ENSMUST00000215878	ENSMUSP00000151023	TRANSLATION	protein_coding	-	CCDS15523.1	5	310	0	0.36	4	183.7	7	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000045336	Hsfy2	ENSMUST00000062085	ENSMUSP00000049715	TRANSLATION	protein_coding	-	CCDS14964.1	-	392	0	0.16	1.5	74.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044337	Ackr3	ENSMUST00000159654	ENSMUSP00000135668	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044337	Ackr3	ENSMUST00000065587	ENSMUSP00000069114	TRANSLATION	protein_coding	-	CCDS15152.1	1	362	0	0.6	7.5	152.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005501	Usp40	ENSMUST00000189409	ENSMUSP00000140240	TRANSLATION	nonsense_mediated_decay	start	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005501	Usp40	ENSMUST00000187871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005501	Usp40	ENSMUST00000186315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005501	Usp40	ENSMUST00000186670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005501	Usp40	ENSMUST00000188332	ENSMUSP00000140574	TRANSLATION	nonsense_mediated_decay	-	-	1	71	2	0.6	0	24.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005501	Usp40	ENSMUST00000190446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005501	Usp40	ENSMUST00000187758	ENSMUSP00000140107	TRANSLATION	protein_coding	-	CCDS78645.1	1	1235	8	5.17	1.5	113.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000005501	Usp40	ENSMUST00000040783	ENSMUSP00000038533	TRANSLATION	protein_coding	-	CCDS15137.1	1	1146	8	5.17	0.5	113.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000005501	Usp40	ENSMUST00000189586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059089	Fcgr4	ENSMUST00000078825	ENSMUSP00000077873	TRANSLATION	protein_coding	-	CCDS15476.1	1	249	0	2.066	1.5	71.7	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000091476	Catspere2	ENSMUST00000239149	ENSMUSP00000158912	TRANSLATION	nonsense_mediated_decay	-	-	-	158	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091476	Catspere2	ENSMUST00000239155	ENSMUSP00000158918	TRANSLATION	protein_coding	-	-	-	775	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000091476	Catspere2	ENSMUST00000094273	ENSMUSP00000091828	TRANSLATION	protein_coding	-	CCDS35802.1	1	145	0	0	0.5	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000091476	Catspere2	ENSMUST00000238506	ENSMUSP00000158854	TRANSLATION	protein_coding	-	-	-	981	0	0	0	106.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091476	Catspere2	ENSMUST00000192146	ENSMUSP00000142187	TRANSLATION	nonsense_mediated_decay	-	-	1	775	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091476	Catspere2	ENSMUST00000191719	ENSMUSP00000159130	TRANSLATION	nonsense_mediated_decay	-	-	1	598	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026288	Inpp5d	ENSMUST00000165554	ENSMUSP00000128700	TRANSLATION	protein_coding	start/stop	-	5	124	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026288	Inpp5d	ENSMUST00000170300	ENSMUSP00000132384	TRANSLATION	protein_coding	-	-	2	867	5	8	0	29.3	0	-4,-5	-	-	7.04	MINOR
ENSMUSG00000026288	Inpp5d	ENSMUST00000167032	ENSMUSP00000126569	TRANSLATION	protein_coding	-	-	2	928	5	8	0	29.3	0	-4,-5	-	-	7.04	MINOR
ENSMUSG00000026288	Inpp5d	ENSMUST00000163222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026288	Inpp5d	ENSMUST00000168783	ENSMUSP00000131244	TRANSLATION	protein_coding	-	CCDS48310.1	1	1130	5	11.25	0.5	86.1	0	-4,-6	-	-	16.868	ALTERNATIVE:2
ENSMUSG00000026288	Inpp5d	ENSMUST00000169754	ENSMUSP00000127941	TRANSLATION	protein_coding	-	CCDS35655.1	1	1191	5	11.25	1.5	86.1	0	-4,-6	-	-	16.868	PRINCIPAL:3
ENSMUSG00000026288	Inpp5d	ENSMUST00000163576	ENSMUSP00000130336	TRANSLATION	protein_coding	stop	-	3	35	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026288	Inpp5d	ENSMUST00000164592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026288	Inpp5d	ENSMUST00000042275	ENSMUSP00000044647	TRANSLATION	protein_coding	-	CCDS48311.1	1	1190	5	11.316	1.5	86.1	0	-4,-6	-	-	17	ALTERNATIVE:2
ENSMUSG00000026288	Inpp5d	ENSMUST00000163548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026288	Inpp5d	ENSMUST00000072999	ENSMUSP00000072763	TRANSLATION	nonsense_mediated_decay	-	-	1	959	5	11.316	0	86.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026062	Slc9a2	ENSMUST00000027231	ENSMUSP00000027231	TRANSLATION	protein_coding	-	CCDS14914.1	1	814	0	3.75	3.9	453.3	7	2,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000026062	Slc9a2	ENSMUST00000192294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026062	Slc9a2	ENSMUST00000192345	ENSMUSP00000142144	TRANSLATION	protein_coding	-	-	1	336	0	0.6	0	203.3	4	2,-2	-	-	0	MINOR
ENSMUSG00000026295	Spp2	ENSMUST00000027518	ENSMUSP00000027518	TRANSLATION	protein_coding	-	CCDS15145.1	1	203	0	0	1.5	125.8	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000026295	Spp2	ENSMUST00000176708	ENSMUSP00000135862	TRANSLATION	protein_coding	-	-	2	89	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026295	Spp2	ENSMUST00000189225	ENSMUSP00000141021	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	0	0	70.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026274	Pask	ENSMUST00000128253	ENSMUSP00000120104	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026274	Pask	ENSMUST00000133886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026274	Pask	ENSMUST00000139028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026274	Pask	ENSMUST00000027493	ENSMUSP00000027493	TRANSLATION	protein_coding	-	CCDS15186.1	1	1383	21	9.2	0.5	250.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026274	Pask	ENSMUST00000148355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026274	Pask	ENSMUST00000128655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051509	Olfr414	ENSMUST00000192358	ENSMUSP00000142051	TRANSLATION	protein_coding	-	CCDS15544.1	2	317	0	0.36	7.5	177.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000051509	Olfr414	ENSMUST00000053178	ENSMUSP00000052426	TRANSLATION	protein_coding	-	CCDS15544.1	-	317	0	0.36	7.5	177.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000045968	Teddm2	ENSMUST00000190620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045968	Teddm2	ENSMUST00000059607	ENSMUSP00000050017	TRANSLATION	protein_coding	-	CCDS15378.1	-	260	0	0	1.5	87.9	7	-2,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000045968	Teddm2	ENSMUST00000123490	ENSMUSP00000115023	TRANSLATION	protein_coding	-	-	1	207	0	0	0	87.9	7	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000026182	Tnp1	ENSMUST00000027374	ENSMUSP00000027374	TRANSLATION	protein_coding	-	CCDS35611.1	1	55	0	0	8.8	102.8	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000034212	Ankmy1	ENSMUST00000112998	ENSMUSP00000108622	TRANSLATION	protein_coding	-	CCDS15178.2	5	1001	8	5.16	0.5	150.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000034212	Ankmy1	ENSMUST00000160548	ENSMUSP00000123787	TRANSLATION	protein_coding	-	CCDS83575.1	2	1002	8	5.16	0.5	150.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034212	Ankmy1	ENSMUST00000212504	ENSMUSP00000148578	TRANSLATION	protein_coding	start	-	5	139	8	0	0	30.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090175	Ugt1a9	ENSMUST00000073772	ENSMUSP00000073444	TRANSLATION	protein_coding	-	CCDS15138.1	1	528	18	3	1.5	766	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000018417	Myo1b	ENSMUST00000140930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018417	Myo1b	ENSMUST00000123299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018417	Myo1b	ENSMUST00000136273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018417	Myo1b	ENSMUST00000114537	ENSMUSP00000110184	TRANSLATION	protein_coding	-	CCDS69887.1	5	1078	16	21.47	9.8	1066.9	0	-4,-5	-	-	18.152	MINOR
ENSMUSG00000018417	Myo1b	ENSMUST00000135125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018417	Myo1b	ENSMUST00000136701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018417	Myo1b	ENSMUST00000140731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018417	Myo1b	ENSMUST00000144694	ENSMUSP00000114603	TRANSLATION	protein_coding	stop	-	5	299	14	8.25	0	412.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018417	Myo1b	ENSMUST00000145367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018417	Myo1b	ENSMUST00000018561	ENSMUSP00000018561	TRANSLATION	protein_coding	-	CCDS48254.1	1	1136	16	22.67	14.8	1066.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000018417	Myo1b	ENSMUST00000151525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018417	Myo1b	ENSMUST00000114541	ENSMUSP00000110188	TRANSLATION	protein_coding	-	-	5	1084	16	21.47	0	1066.9	0	-4,-5	-	-	15.6	MINOR
ENSMUSG00000018417	Myo1b	ENSMUST00000126657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018417	Myo1b	ENSMUST00000126952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018417	Myo1b	ENSMUST00000046390	ENSMUSP00000040447	TRANSLATION	protein_coding	-	CCDS14942.1	1	1107	16	22.07	9.8	1066.9	0	-4,-5	-	-	19.352	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000159678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048402	Gli2	ENSMUST00000062483	ENSMUSP00000054837	TRANSLATION	protein_coding	-	CCDS35692.1	1	1544	21	3.35	0.5	84.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048402	Gli2	ENSMUST00000162607	ENSMUSP00000123808	TRANSLATION	protein_coding	stop	-	1	270	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000161451	ENSMUSP00000124132	TRANSLATION	protein_coding	stop	-	1	244	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000161301	ENSMUSP00000125342	TRANSLATION	protein_coding	stop	-	1	447	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000162552	ENSMUSP00000125059	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000160991	ENSMUSP00000125634	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000159839	ENSMUSP00000125661	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048402	Gli2	ENSMUST00000161056	ENSMUSP00000124768	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064246	Chil1	ENSMUST00000156873	ENSMUSP00000119205	TRANSLATION	protein_coding	-	-	5	379	0	8.962	0.5	303.5	0	4,-1	-	-	11.868	ALTERNATIVE:2
ENSMUSG00000064246	Chil1	ENSMUST00000139254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064246	Chil1	ENSMUST00000082060	ENSMUSP00000080717	TRANSLATION	protein_coding	-	CCDS48368.1	1	389	0	9.028	0.5	303.5	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000064246	Chil1	ENSMUST00000133701	ENSMUSP00000121471	TRANSLATION	protein_coding	stop	-	5	106	0	2.75	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064246	Chil1	ENSMUST00000134812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064246	Chil1	ENSMUST00000153856	ENSMUSP00000117117	TRANSLATION	protein_coding	-	-	1	381	0	9.028	0.5	303.5	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000064246	Chil1	ENSMUST00000144819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064246	Chil1	ENSMUST00000132873	ENSMUSP00000118289	TRANSLATION	protein_coding	stop	-	5	110	0	2.75	0	89.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000163179	ENSMUSP00000130841	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	0.698	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000166422	ENSMUSP00000129180	TRANSLATION	nonsense_mediated_decay	-	-	3	89	0	1.548	0	47.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000164269	ENSMUSP00000126130	TRANSLATION	nonsense_mediated_decay	start	-	5	40	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000168429	ENSMUSP00000130299	TRANSLATION	protein_coding	start/stop	-	3	144	0	3.56	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000168808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026384	Ptpn4	ENSMUST00000163621	ENSMUSP00000130808	TRANSLATION	protein_coding	-	-	3	88	0	1.548	0	47.5	0	-4,0	-	-	0	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000166624	ENSMUSP00000126216	TRANSLATION	nonsense_mediated_decay	start	-	1	72	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000164086	ENSMUSP00000127998	TRANSLATION	protein_coding	start/stop	-	3	133	0	3.178	0	70.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000163435	ENSMUSP00000127713	TRANSLATION	protein_coding	-	-	1	556	0	9.988	0	299.7	0	-4,0	-	-	0	MINOR
ENSMUSG00000026384	Ptpn4	ENSMUST00000064091	ENSMUSP00000067614	TRANSLATION	protein_coding	-	CCDS15227.1	5	926	11	18.898	10.8	636.8	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000026384	Ptpn4	ENSMUST00000168303	ENSMUSP00000129521	TRANSLATION	protein_coding	stop	-	5	91	0	1.93	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026177	Slc11a1	ENSMUST00000147233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026177	Slc11a1	ENSMUST00000127487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026177	Slc11a1	ENSMUST00000135137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026177	Slc11a1	ENSMUST00000136786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026177	Slc11a1	ENSMUST00000027368	ENSMUSP00000027368	TRANSLATION	protein_coding	-	CCDS15047.1	1	548	0	7.93	2.7	392.1	9	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026177	Slc11a1	ENSMUST00000133896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026177	Slc11a1	ENSMUST00000131511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026177	Slc11a1	ENSMUST00000155865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026177	Slc11a1	ENSMUST00000187516	ENSMUSP00000139455	TRANSLATION	protein_coding	-	-	5	507	0	7.13	1	374.9	8	-4,-1	-	-	9.366	MINOR
ENSMUSG00000026177	Slc11a1	ENSMUST00000134189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026177	Slc11a1	ENSMUST00000149166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016528	Mapkapk2	ENSMUST00000016672	ENSMUSP00000016672	TRANSLATION	protein_coding	-	CCDS15266.1	1	386	23	8.75	1.5	228.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000016528	Mapkapk2	ENSMUST00000188459	ENSMUSP00000141124	TRANSLATION	protein_coding	stop	-	3	162	13	4.25	0	158.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090272	Mndal	ENSMUST00000189501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090272	Mndal	ENSMUST00000189474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090272	Mndal	ENSMUST00000187636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090272	Mndal	ENSMUST00000220623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090272	Mndal	ENSMUST00000191500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090272	Mndal	ENSMUST00000188804	ENSMUSP00000140610	TRANSLATION	protein_coding	-	CCDS48452.1	1	538	0	3.88	0.5	298.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000090272	Mndal	ENSMUST00000190071	ENSMUSP00000141055	TRANSLATION	nonsense_mediated_decay	start	-	5	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090272	Mndal	ENSMUST00000186442	ENSMUSP00000140539	TRANSLATION	protein_coding	-	-	5	485	0	3.88	0.5	298.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000090272	Mndal	ENSMUST00000190651	ENSMUSP00000140191	TRANSLATION	protein_coding	stop	-	5	184	0	1.48	0	53.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062527	Olfr1408	ENSMUST00000200689	ENSMUSP00000143864	TRANSLATION	protein_coding	-	CCDS15522.1	3	310	0	0.2	4	187	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000062527	Olfr1408	ENSMUST00000073663	ENSMUSP00000073345	TRANSLATION	protein_coding	-	CCDS15522.1	-	310	0	0.2	4	187	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000069085	Dytn	ENSMUST00000090313	ENSMUSP00000087787	TRANSLATION	protein_coding	-	CCDS35595.1	1	653	3	3.31	0.5	148	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000069085	Dytn	ENSMUST00000126954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000081984	Dnajb3	ENSMUST00000119972	ENSMUSP00000112703	TRANSLATION	protein_coding	-	CCDS15142.1	-	242	0	0.6	1.5	96.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002459	Rgs20	ENSMUST00000002533	ENSMUSP00000002533	TRANSLATION	protein_coding	-	CCDS14807.1	1	239	3	2.53	2.7	120.9	0	-4,-2	-	-	15	PRINCIPAL:3
ENSMUSG00000002459	Rgs20	ENSMUST00000170566	ENSMUSP00000131165	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002459	Rgs20	ENSMUST00000147158	ENSMUSP00000117380	TRANSLATION	protein_coding	stop	-	2	200	3	1.2	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002459	Rgs20	ENSMUST00000133521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002459	Rgs20	ENSMUST00000118000	ENSMUSP00000113398	TRANSLATION	protein_coding	-	CCDS48213.1	5	372	3	2.53	0.5	120.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000002459	Rgs20	ENSMUST00000119256	ENSMUSP00000113324	TRANSLATION	protein_coding	-	CCDS69859.1	3	208	3	2.53	0.5	120.9	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000002459	Rgs20	ENSMUST00000156289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026667	Uhmk1	ENSMUST00000150821	ENSMUSP00000115622	TRANSLATION	protein_coding	-	-	1	330	4	2.45	0	138.1	0	-4,-7	-	-	13.618	MINOR
ENSMUSG00000026667	Uhmk1	ENSMUST00000123399	ENSMUSP00000120787	TRANSLATION	protein_coding	-	-	5	344	4	2.87	4.1	134.5	0	-4,-7	-	-	15.469	MINOR
ENSMUSG00000026667	Uhmk1	ENSMUST00000027979	ENSMUSP00000027979	TRANSLATION	protein_coding	-	CCDS15468.1	1	419	4	2.87	8.8	163.2	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000026280	Atg4b	ENSMUST00000189152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026280	Atg4b	ENSMUST00000185482	ENSMUSP00000140758	TRANSLATION	nonsense_mediated_decay	-	-	5	143	0	3.75	0	127.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026280	Atg4b	ENSMUST00000185754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026280	Atg4b	ENSMUST00000186124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026280	Atg4b	ENSMUST00000187824	ENSMUSP00000139541	TRANSLATION	protein_coding	stop	-	5	121	0	3.58	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026280	Atg4b	ENSMUST00000186811	ENSMUSP00000139463	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	1.5	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026280	Atg4b	ENSMUST00000149436	ENSMUSP00000123383	TRANSLATION	protein_coding	stop	-	3	150	0	4.316	0	154	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026280	Atg4b	ENSMUST00000027502	ENSMUSP00000027502	TRANSLATION	protein_coding	-	CCDS15195.1	1	393	0	11.08	5.1	333.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026280	Atg4b	ENSMUST00000186001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026280	Atg4b	ENSMUST00000189872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026280	Atg4b	ENSMUST00000135762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073491	Ifi213	ENSMUST00000150649	ENSMUSP00000117222	TRANSLATION	protein_coding	-	-	5	586	0	1	0.5	47.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000073491	Ifi213	ENSMUST00000097462	ENSMUSP00000095070	TRANSLATION	protein_coding	-	CCDS48450.1	1	135	0	1	0.5	47.6	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000073491	Ifi213	ENSMUST00000180215	ENSMUSP00000136238	TRANSLATION	protein_coding	-	CCDS48450.1	3	135	0	1	0.5	47.6	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000073491	Ifi213	ENSMUST00000178186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073491	Ifi213	ENSMUST00000179648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067780	Pi15	ENSMUST00000088476	ENSMUSP00000085826	TRANSLATION	protein_coding	-	CCDS48225.1	1	269	2	2.84	0.5	89.6	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026475	Rgs16	ENSMUST00000027748	ENSMUSP00000027748	TRANSLATION	protein_coding	-	CCDS15376.1	1	201	0	3.33	6.3	121.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000044816	D630023F18Rik	ENSMUST00000050047	ENSMUSP00000056196	TRANSLATION	protein_coding	-	CCDS15015.1	1	231	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000044816	D630023F18Rik	ENSMUST00000148020	ENSMUSP00000120090	TRANSLATION	protein_coding	-	CCDS69896.1	1	196	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000044816	D630023F18Rik	ENSMUST00000153330	ENSMUSP00000115574	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000137906	ENSMUSP00000117810	TRANSLATION	protein_coding	-	CCDS14876.1	1	532	0	1.75	0.5	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000126413	ENSMUSP00000115490	TRANSLATION	protein_coding	stop	-	2	256	0	3.25	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000115031	ENSMUSP00000110683	TRANSLATION	protein_coding	-	-	2	684	0	3.25	0	30.5	0	-4,-5	-	-	9.096	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000192874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037447	Arid5a	ENSMUST00000141121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037447	Arid5a	ENSMUST00000097778	ENSMUSP00000095385	TRANSLATION	protein_coding	-	CCDS78560.1	1	619	0	3.25	0.5	59.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037447	Arid5a	ENSMUST00000124280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037447	Arid5a	ENSMUST00000115029	ENSMUSP00000110681	TRANSLATION	protein_coding	-	CCDS69878.1	3	431	0	0	1.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000115032	ENSMUSP00000110684	TRANSLATION	protein_coding	-	CCDS48239.1	1	590	0	3.25	1.5	59.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000037447	Arid5a	ENSMUST00000140218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037447	Arid5a	ENSMUST00000145179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037447	Arid5a	ENSMUST00000116629	ENSMUSP00000136037	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000150747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037447	Arid5a	ENSMUST00000142319	ENSMUSP00000119953	TRANSLATION	protein_coding	stop	-	5	120	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037447	Arid5a	ENSMUST00000147123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078184	Rbm8a2	ENSMUST00000104983	ENSMUSP00000100599	TRANSLATION	protein_coding	-	-	-	174	0	1	0	65.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026383	Epb41l5	ENSMUST00000163147	ENSMUSP00000128374	TRANSLATION	protein_coding	-	-	1	739	0	7.91	0	256.8	0	-4,0	-	-	12	MINOR
ENSMUSG00000026383	Epb41l5	ENSMUST00000191046	ENSMUSP00000140227	TRANSLATION	protein_coding	-	CCDS48339.1	1	504	0	7.91	5.1	256.8	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000026383	Epb41l5	ENSMUST00000187239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026383	Epb41l5	ENSMUST00000189042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026383	Epb41l5	ENSMUST00000187194	ENSMUSP00000139683	TRANSLATION	protein_coding	stop	-	5	114	0	1.7	0	57.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026383	Epb41l5	ENSMUST00000185467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026383	Epb41l5	ENSMUST00000191162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026383	Epb41l5	ENSMUST00000027632	ENSMUSP00000027632	TRANSLATION	protein_coding	-	CCDS48339.1	1	504	0	7.91	5.1	256.8	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000026383	Epb41l5	ENSMUST00000052404	ENSMUSP00000058966	TRANSLATION	protein_coding	-	CCDS15226.1	1	731	0	7.745	0.5	256.8	0	-4,0	-	-	11.67	MINOR
ENSMUSG00000025956	Mettl21a	ENSMUST00000114079	ENSMUSP00000109713	TRANSLATION	protein_coding	-	CCDS15006.1	1	218	19	3	7.5	174.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025956	Mettl21a	ENSMUST00000162806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025956	Mettl21a	ENSMUST00000053469	ENSMUSP00000050424	TRANSLATION	protein_coding	-	CCDS15006.1	1	218	19	3	7.5	174.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025956	Mettl21a	ENSMUST00000161264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000113846	Gm6217	ENSMUST00000222182	ENSMUSP00000152518	TRANSLATION	protein_coding	-	-	-	128	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000114212	Gm47985	ENSMUST00000225278	ENSMUSP00000152996	TRANSLATION	protein_coding	-	-	-	300	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026307	Scly	ENSMUST00000027532	ENSMUSP00000027532	TRANSLATION	protein_coding	-	CCDS15159.1	1	432	14	11.49	1.5	188.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026307	Scly	ENSMUST00000147523	ENSMUSP00000114759	TRANSLATION	protein_coding	start/stop	-	3	249	14	6.042	0	134.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000123651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026307	Scly	ENSMUST00000137074	ENSMUSP00000122449	TRANSLATION	protein_coding	start/stop	-	5	218	12	4.778	0	97.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000154045	ENSMUSP00000137796	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000142488	ENSMUSP00000119979	TRANSLATION	protein_coding	stop	-	3	245	10	5.93	0	101.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000145843	ENSMUSP00000116824	TRANSLATION	protein_coding	stop	-	3	68	3	2.08	0	45	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000124832	ENSMUSP00000116382	TRANSLATION	protein_coding	start/stop	-	3	216	8	4.915	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026307	Scly	ENSMUST00000142802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026307	Scly	ENSMUST00000153621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026088	Mitd1	ENSMUST00000027257	ENSMUSP00000027257	TRANSLATION	protein_coding	-	CCDS35542.1	1	249	1	6.5	5.1	258.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026088	Mitd1	ENSMUST00000131754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026088	Mitd1	ENSMUST00000127170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026088	Mitd1	ENSMUST00000139725	ENSMUSP00000123009	TRANSLATION	protein_coding	-	CCDS35542.1	1	249	1	6.5	5.1	258.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026088	Mitd1	ENSMUST00000138806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026603	Smyd2	ENSMUST00000130804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026603	Smyd2	ENSMUST00000027897	ENSMUSP00000027897	TRANSLATION	protein_coding	-	CCDS35821.1	1	433	28	11	10.3	91.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026603	Smyd2	ENSMUST00000144452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026603	Smyd2	ENSMUST00000132289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084989	Crocc2	ENSMUST00000138595	ENSMUSP00000120588	TRANSLATION	protein_coding	-	CCDS78654.1	5	1638	0	0	0.5	59.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078185	Chml	ENSMUST00000211207	ENSMUSP00000147889	TRANSLATION	protein_coding	-	CCDS35796.1	-	621	0	2.7	1.5	198.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078185	Chml	ENSMUST00000211489	ENSMUSP00000147362	TRANSLATION	protein_coding	stop	-	3	160	0	1.6	0	39	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000078185	Chml	ENSMUST00000210367	ENSMUSP00000147761	TRANSLATION	protein_coding	-	-	5	278	0	1	0	79.6	0	-4,-5	-	-	2.22	MINOR
ENSMUSG00000078185	Chml	ENSMUST00000104984	ENSMUSP00000100600	TRANSLATION	protein_coding	-	CCDS35796.1	5	621	0	2.7	1.5	198.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078185	Chml	ENSMUST00000209720	ENSMUSP00000148253	TRANSLATION	protein_coding	-	-	5	156	0	1.2	0	39.7	2	-4,-5	-	-	2.664	MINOR
ENSMUSG00000026032	Ndufb3	ENSMUST00000027193	ENSMUSP00000027193	TRANSLATION	protein_coding	-	CCDS14977.1	1	104	0	2	0.5	77.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051998	Lax1	ENSMUST00000189524	ENSMUSP00000140039	TRANSLATION	protein_coding	-	-	2	50	2	0	0	0	0	-4,-6	-	-	2	MINOR
ENSMUSG00000051998	Lax1	ENSMUST00000169295	ENSMUSP00000131126	TRANSLATION	protein_coding	-	CCDS35711.1	1	407	0	0	1.5	560.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041779	Tram2	ENSMUST00000037998	ENSMUSP00000047992	TRANSLATION	protein_coding	-	CCDS14846.1	1	370	0	0	6.3	156.7	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000041779	Tram2	ENSMUST00000187210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026228	Htr2b	ENSMUST00000155077	ENSMUSP00000116273	TRANSLATION	protein_coding	start/stop	-	1	173	1	3.32	0	129.7	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000026228	Htr2b	ENSMUST00000027431	ENSMUSP00000027431	TRANSLATION	protein_coding	-	CCDS35644.1	1	479	7	4.3	1.5	215.1	9	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000042596	Tfap2d	ENSMUST00000037294	ENSMUSP00000037699	TRANSLATION	protein_coding	-	CCDS14838.1	1	452	0	0	18.5	286.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000042596	Tfap2d	ENSMUST00000149505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079658	Eloc	ENSMUST00000185771	ENSMUSP00000139675	TRANSLATION	protein_coding	-	CCDS35517.1	5	112	0	2.5	19.5	43.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079658	Eloc	ENSMUST00000186948	ENSMUSP00000140962	TRANSLATION	protein_coding	-	CCDS35517.1	2	112	0	2.5	19.5	43.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079658	Eloc	ENSMUST00000188641	ENSMUSP00000140422	TRANSLATION	protein_coding	-	CCDS35517.1	1	112	0	2.5	19.5	43.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079658	Eloc	ENSMUST00000186701	ENSMUSP00000139741	TRANSLATION	protein_coding	stop	-	5	51	0	1	2	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079658	Eloc	ENSMUST00000115352	ENSMUSP00000111009	TRANSLATION	protein_coding	-	CCDS35517.1	1	112	0	2.5	19.5	43.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079658	Eloc	ENSMUST00000186541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079658	Eloc	ENSMUST00000190986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079658	Eloc	ENSMUST00000187910	ENSMUSP00000139480	TRANSLATION	protein_coding	-	CCDS78549.1	2	134	0	2.5	0.5	43.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000079658	Eloc	ENSMUST00000191535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079658	Eloc	ENSMUST00000185393	ENSMUSP00000140161	TRANSLATION	protein_coding	stop	-	2	95	0	2	0	43.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079658	Eloc	ENSMUST00000188987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062510	Nsl1	ENSMUST00000076952	ENSMUSP00000076220	TRANSLATION	protein_coding	stop	-	3	193	0	3.25	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062510	Nsl1	ENSMUST00000139340	ENSMUSP00000115289	TRANSLATION	protein_coding	-	-	1	174	0	3.25	0.5	67.7	0	-4,-5	-	-	8.106	MINOR
ENSMUSG00000062510	Nsl1	ENSMUST00000078259	ENSMUSP00000077380	TRANSLATION	protein_coding	-	CCDS15614.1	1	281	0	4.4	1.5	92.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026523	Wdr64	ENSMUST00000194783	ENSMUSP00000141384	TRANSLATION	nonsense_mediated_decay	start	-	1	521	0	3.47	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026523	Wdr64	ENSMUST00000195794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026523	Wdr64	ENSMUST00000194087	ENSMUSP00000141740	TRANSLATION	protein_coding	-	-	5	1074	0	5.115	0	30.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026523	Wdr64	ENSMUST00000094288	ENSMUSP00000091846	TRANSLATION	protein_coding	-	CCDS48460.1	5	1084	0	5.115	0.5	30.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000026523	Wdr64	ENSMUST00000171939	ENSMUSP00000128678	TRANSLATION	protein_coding	-	-	5	1086	0	5.115	0	30.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000089943	Ugt1a5	ENSMUST00000097659	ENSMUSP00000095263	TRANSLATION	protein_coding	-	CCDS35659.1	1	529	18	3	0.5	807.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000090165	Ugt1a10	ENSMUST00000173325	ENSMUSP00000134443	TRANSLATION	protein_coding,RT	stop	-	3	210	19	3.45	0	337.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090165	Ugt1a10	ENSMUST00000113142	ENSMUSP00000108767	TRANSLATION	protein_coding	-	CCDS35657.1	1	530	19	4.2	1.5	757.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000090165	Ugt1a10	ENSMUST00000138182	ENSMUSP00000119985	TRANSLATION	protein_coding	stop	-	3	207	19	3.75	0	297.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000044835	Ankrd45	ENSMUST00000052245	ENSMUSP00000059923	TRANSLATION	protein_coding	-	CCDS48414.1	5	282	0	4.074	0.5	43.8	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000044835	Ankrd45	ENSMUST00000150721	ENSMUSP00000142253	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044835	Ankrd45	ENSMUST00000111608	ENSMUSP00000107235	TRANSLATION	protein_coding	-	-	1	248	0	4.074	0.5	43.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044835	Ankrd45	ENSMUST00000192384	ENSMUSP00000141322	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044835	Ankrd45	ENSMUST00000125018	ENSMUSP00000117977	TRANSLATION	protein_coding	stop	-	5	205	0	2.81	0	43.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000187790	ENSMUSP00000139542	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000185329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025932	Eya1	ENSMUST00000189526	ENSMUSP00000140619	TRANSLATION	protein_coding	start	-	2	118	3	2.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000190337	ENSMUSP00000141112	TRANSLATION	protein_coding	-	CCDS78545.1	1	591	5	7.7	7.8	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025932	Eya1	ENSMUST00000027066	ENSMUSP00000027066	TRANSLATION	protein_coding	-	CCDS78545.1	5	591	5	7.7	7.8	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025932	Eya1	ENSMUST00000185453	ENSMUSP00000141072	TRANSLATION	protein_coding	stop	-	3	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000188857	ENSMUSP00000140171	TRANSLATION	protein_coding	stop	-	3	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000168081	ENSMUSP00000126383	TRANSLATION	protein_coding	-	CCDS78546.1	1	587	5	7.7	4.1	0	0	-4,-5	-	-	12.368	MINOR
ENSMUSG00000025932	Eya1	ENSMUST00000080664	ENSMUSP00000079493	TRANSLATION	protein_coding	-	CCDS56621.1	1	558	5	7.7	5.3	0	0	-4,-6	-	-	12.896	MINOR
ENSMUSG00000026459	Myog	ENSMUST00000027730	ENSMUSP00000027730	TRANSLATION	protein_coding	-	CCDS15306.1	1	224	0	0.8	6.3	136	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000099913	Gm28551	ENSMUST00000144660	ENSMUSP00000139404	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	567	16	0	0	20.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000062345	Serpinb2	ENSMUST00000064916	ENSMUSP00000065277	TRANSLATION	protein_coding	-	CCDS15219.1	1	415	0	7.265	1.5	422.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062345	Serpinb2	ENSMUST00000143832	ENSMUSP00000114751	TRANSLATION	nonsense_mediated_decay	start	-	5	189	0	4.844	0	190	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062345	Serpinb2	ENSMUST00000146597	ENSMUSP00000119795	TRANSLATION	nonsense_mediated_decay	start	-	5	35	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062345	Serpinb2	ENSMUST00000009356	ENSMUSP00000009356	TRANSLATION	protein_coding	-	CCDS15219.1	1	415	0	7.265	1.5	422.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040485	Lrrc52	ENSMUST00000036643	ENSMUSP00000047213	TRANSLATION	protein_coding	-	CCDS15458.1	1	314	0	0.8	1.5	76.4	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070034	Sp110	ENSMUST00000152399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070034	Sp110	ENSMUST00000143363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070034	Sp110	ENSMUST00000186740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070034	Sp110	ENSMUST00000150114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070034	Sp110	ENSMUST00000128339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070034	Sp110	ENSMUST00000131950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070034	Sp110	ENSMUST00000130727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070034	Sp110	ENSMUST00000093508	ENSMUSP00000091226	TRANSLATION	protein_coding	-	CCDS35637.1	1	445	0	2.3	0.5	226.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070034	Sp110	ENSMUST00000151690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044594	Serpinb3a	ENSMUST00000112717	ENSMUSP00000108337	TRANSLATION	protein_coding	-	CCDS15214.1	1	387	0	6.35	1.5	450.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044594	Serpinb3a	ENSMUST00000027567	ENSMUSP00000027567	TRANSLATION	protein_coding	-	CCDS15214.1	1	387	0	6.35	1.5	450.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049456	Olfr1404	ENSMUST00000217374	ENSMUSP00000151077	TRANSLATION	protein_coding	-	CCDS15525.1	5	313	0	0.36	4	184.7	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049456	Olfr1404	ENSMUST00000216556	ENSMUSP00000150122	TRANSLATION	protein_coding	-	CCDS15525.1	5	313	0	0.36	4	184.7	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049456	Olfr1404	ENSMUST00000056592	ENSMUSP00000050406	TRANSLATION	protein_coding	-	CCDS15525.1	-	313	0	0.36	4	184.7	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000026024	Als2	ENSMUST00000188469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026024	Als2	ENSMUST00000163058	ENSMUSP00000125753	TRANSLATION	protein_coding	-	CCDS35583.1	1	1651	0	3.9	1.5	363.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026024	Als2	ENSMUST00000159166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026024	Als2	ENSMUST00000160945	ENSMUSP00000140990	TRANSLATION	protein_coding	stop	-	2	69	0	0.48	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026024	Als2	ENSMUST00000027178	ENSMUSP00000027178	TRANSLATION	protein_coding	-	CCDS35583.1	1	1651	0	3.9	1.5	363.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025938	Slco5a1	ENSMUST00000191566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025938	Slco5a1	ENSMUST00000136197	ENSMUSP00000139533	TRANSLATION	protein_coding	-	-	1	658	0	0	0	515.6	18	-4,-5	-	-	0	MINOR
ENSMUSG00000025938	Slco5a1	ENSMUST00000115402	ENSMUSP00000111061	TRANSLATION	protein_coding	-	-	5	688	0	0	0	549.9	20	-4,-5	-	-	0	MINOR
ENSMUSG00000025938	Slco5a1	ENSMUST00000146763	ENSMUSP00000139586	TRANSLATION	protein_coding	-	-	1	401	0	0	0	264.8	11	-4,-5	-	-	0	MINOR
ENSMUSG00000025938	Slco5a1	ENSMUST00000147606	ENSMUSP00000140658	TRANSLATION	protein_coding	-	-	1	478	0	0	0	385.5	16	-4,-5	-	-	0	MINOR
ENSMUSG00000025938	Slco5a1	ENSMUST00000115403	ENSMUSP00000111062	TRANSLATION	protein_coding	-	CCDS14821.2	5	850	0	0	1.5	657.4	22	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025938	Slco5a1	ENSMUST00000188454	ENSMUSP00000140091	TRANSLATION	protein_coding	-	CCDS14821.2	5	850	0	0	1.5	657.4	22	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025938	Slco5a1	ENSMUST00000133201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026560	Fmo9	ENSMUST00000148677	ENSMUSP00000114750	TRANSLATION	protein_coding	-	CCDS83628.1	1	488	30	2.84	0.5	731.1	1	-4,-6	-	-	3.912	MINOR
ENSMUSG00000026560	Fmo9	ENSMUST00000027843	ENSMUSP00000027843	TRANSLATION	protein_coding	-	CCDS15453.1	1	539	44	3.904	0.5	830.4	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025958	Creb1	ENSMUST00000190348	ENSMUSP00000140112	TRANSLATION	protein_coding	-	CCDS15004.1	1	341	0	3.2	6.3	142.4	0	-4,-5	-	-	13.324	MINOR
ENSMUSG00000025958	Creb1	ENSMUST00000188855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025958	Creb1	ENSMUST00000049932	ENSMUSP00000059973	TRANSLATION	protein_coding	-	CCDS15004.1	5	341	0	3.2	6.3	142.4	0	-4,-5	-	-	13.324	MINOR
ENSMUSG00000025958	Creb1	ENSMUST00000187811	ENSMUSP00000140649	TRANSLATION	protein_coding	-	-	1	317	0	2.2	0	74.9	0	-4,-5	-	-	5.952	MINOR
ENSMUSG00000025958	Creb1	ENSMUST00000190979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025958	Creb1	ENSMUST00000087366	ENSMUSP00000084624	TRANSLATION	protein_coding	-	CCDS15005.1	1	327	0	3.2	17	142.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025958	Creb1	ENSMUST00000185594	ENSMUSP00000139995	TRANSLATION	protein_coding	-	CCDS15005.1	5	327	0	3.2	17	142.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025958	Creb1	ENSMUST00000186335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025958	Creb1	ENSMUST00000190876	ENSMUSP00000140189	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025958	Creb1	ENSMUST00000171164	ENSMUSP00000132860	TRANSLATION	protein_coding	-	CCDS48280.1	1	287	0	3.2	7.1	142.4	0	-4,-6	-	-	13.524	MINOR
ENSMUSG00000025958	Creb1	ENSMUST00000187035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026452	Syt2	ENSMUST00000121990	ENSMUSP00000112438	TRANSLATION	protein_coding	-	CCDS15312.1	1	422	21	6.8	5.2	183.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000026452	Syt2	ENSMUST00000187702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026452	Syt2	ENSMUST00000188842	ENSMUSP00000140081	TRANSLATION	protein_coding	-	CCDS15312.1	1	422	21	6.8	5.2	183.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000026452	Syt2	ENSMUST00000187725	ENSMUSP00000141156	TRANSLATION	protein_coding	stop	-	1	69	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026697	Myoc	ENSMUST00000028020	ENSMUSP00000028020	TRANSLATION	protein_coding	-	CCDS15422.1	1	490	0	1.76	0.5	284.6	0	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000006007	Pdc	ENSMUST00000165062	ENSMUSP00000131631	TRANSLATION	protein_coding	-	CCDS15354.1	2	244	0	3.55	7.5	422.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006007	Pdc	ENSMUST00000191228	ENSMUSP00000141136	TRANSLATION	protein_coding	-	CCDS15354.1	1	244	0	3.55	7.5	422.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006007	Pdc	ENSMUST00000185698	ENSMUSP00000140669	TRANSLATION	protein_coding	-	-	1	82	0	1.55	0	78.6	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000006007	Pdc	ENSMUST00000186572	ENSMUSP00000140843	TRANSLATION	protein_coding	stop	-	2	185	0	2.55	0	315.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025779	Ly96	ENSMUST00000191260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025779	Ly96	ENSMUST00000190366	ENSMUSP00000140411	TRANSLATION	protein_coding	-	CCDS78550.1	1	142	0	4.25	0.5	26.6	0	0,-3	-	-	8.262	MINOR
ENSMUSG00000025779	Ly96	ENSMUST00000026881	ENSMUSP00000026881	TRANSLATION	protein_coding	-	CCDS14832.1	1	160	0	4.75	5.1	48.9	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000041782	Lad1	ENSMUST00000190773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041782	Lad1	ENSMUST00000038760	ENSMUSP00000044630	TRANSLATION	protein_coding	-	CCDS35723.1	1	528	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000041782	Lad1	ENSMUST00000185756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046404	Yod1	ENSMUST00000049813	ENSMUSP00000055318	TRANSLATION	protein_coding	-	CCDS48351.1	1	343	0	2	0.5	25.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026047	Poglut2	ENSMUST00000065767	ENSMUSP00000064500	TRANSLATION	protein_coding	-	CCDS14929.1	1	502	0	5.29	8.8	433.3	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000026047	Poglut2	ENSMUST00000152643	ENSMUSP00000114287	TRANSLATION	nonsense_mediated_decay	-	-	3	137	0	2	0	55.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026047	Poglut2	ENSMUST00000149665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026047	Poglut2	ENSMUST00000027213	ENSMUSP00000027213	TRANSLATION	protein_coding	-	-	1	432	0	4.49	0	242.9	0	4,-1	-	-	4.398	MINOR
ENSMUSG00000026047	Poglut2	ENSMUST00000141125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098549	Gm5269	ENSMUST00000183590	ENSMUSP00000139129	TRANSLATION	protein_coding	-	-	-	45	0	1	0	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000098549	Gm5269	ENSMUST00000184038	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000114694	Gm47995	ENSMUST00000225273	ENSMUSP00000153498	TRANSLATION	protein_coding	-	-	-	300	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000039224	D1Pas1	ENSMUST00000045108	ENSMUSP00000035261	TRANSLATION	protein_coding	-	CCDS15603.1	-	660	20	1	7.5	280	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041498	Kif14	ENSMUST00000201158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041498	Kif14	ENSMUST00000195390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041498	Kif14	ENSMUST00000195274	ENSMUSP00000142040	TRANSLATION	protein_coding	start/stop	-	1	69	0	2.08	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041498	Kif14	ENSMUST00000193587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041498	Kif14	ENSMUST00000201676	ENSMUSP00000144265	TRANSLATION	nonsense_mediated_decay	-	-	5	497	10	1.732	0	64.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041498	Kif14	ENSMUST00000189413	ENSMUSP00000139698	TRANSLATION	protein_coding	-	CCDS78693.1	1	1674	11	8.26	0.5	447.7	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000041498	Kif14	ENSMUST00000047817	ENSMUSP00000044257	TRANSLATION	protein_coding	-	-	5	1624	11	8.26	0	447.7	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000041498	Kif14	ENSMUST00000187963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026220	Slc16a14	ENSMUST00000027422	ENSMUSP00000027422	TRANSLATION	protein_coding	-	CCDS15106.1	1	512	0	0	1.5	138.7	13	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026220	Slc16a14	ENSMUST00000186980	ENSMUSP00000140314	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000042554	Zp3r	ENSMUST00000142416	ENSMUSP00000118784	TRANSLATION	protein_coding	-	-	5	514	0	6.69	1	215.5	0	0,-3	-	-	8.1	MINOR
ENSMUSG00000042554	Zp3r	ENSMUST00000128128	ENSMUSP00000114401	TRANSLATION	protein_coding	-	-	5	535	0	7.14	1	215.5	0	-3,1	-	-	9	MINOR
ENSMUSG00000042554	Zp3r	ENSMUST00000039862	ENSMUSP00000045443	TRANSLATION	protein_coding	-	CCDS15257.1	1	579	0	7.49	1.5	253.8	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000117310	Ptp4a1	ENSMUST00000027232	ENSMUSP00000027232	TRANSLATION	protein_coding	-	CCDS14858.1	1	173	11	4.75	21.5	33.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000117310	Ptp4a1	ENSMUST00000076587	ENSMUSP00000110861	TRANSLATION	protein_coding	-	-	1	43	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000117310	Ptp4a1	ENSMUST00000233506	ENSMUSP00000156424	TRANSLATION	protein_coding	-	-	-	44	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000117310	Ptp4a1	ENSMUST00000238874	ENSMUSP00000159162	TRANSLATION	protein_coding	-	-	-	35	0	0	0	0	0	-2,2	-	-	0	MINOR
ENSMUSG00000058248	Kcnh1	ENSMUST00000078470	ENSMUSP00000077563	TRANSLATION	protein_coding	-	CCDS15627.1	1	989	0	10.88	3.9	244.3	4	-4,-2	-	-	13.425	MINOR
ENSMUSG00000058248	Kcnh1	ENSMUST00000110844	ENSMUSP00000106468	TRANSLATION	protein_coding	-	CCDS35826.1	1	962	0	10.88	7.1	240.7	4	-4,-2	-	-	14.784	PRINCIPAL:1
ENSMUSG00000058248	Kcnh1	ENSMUST00000151152	ENSMUSP00000141247	TRANSLATION	protein_coding	start	-	3	98	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040297	Suco	ENSMUST00000192422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040297	Suco	ENSMUST00000191975	ENSMUSP00000141627	TRANSLATION	protein_coding	start/stop	-	3	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040297	Suco	ENSMUST00000194106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040297	Suco	ENSMUST00000048377	ENSMUSP00000044815	TRANSLATION	protein_coding	-	CCDS48415.1	1	1254	0	0	0.5	129.7	0	0,-4	-	-	5.622	PRINCIPAL:1
ENSMUSG00000040297	Suco	ENSMUST00000194388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040297	Suco	ENSMUST00000191841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040297	Suco	ENSMUST00000192570	ENSMUSP00000141896	TRANSLATION	protein_coding	start/stop	-	3	179	0	0	0	136	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000117809	Gm50478	ENSMUST00000236737	ENSMUSP00000158316	TRANSLATION	protein_coding	-	-	-	99	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000026484	Rnf2	ENSMUST00000187991	ENSMUSP00000140299	TRANSLATION	protein_coding	stop	-	3	73	5	1.75	0	35.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026484	Rnf2	ENSMUST00000076110	ENSMUSP00000075476	TRANSLATION	protein_coding	-	CCDS15362.1	1	336	8	6.01	14.8	157.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026484	Rnf2	ENSMUST00000186415	ENSMUSP00000140594	TRANSLATION	protein_coding	-	-	5	264	6	4.68	1.2	147.6	0	-4,-5	-	-	13.328	MINOR
ENSMUSG00000026484	Rnf2	ENSMUST00000190070	ENSMUSP00000139676	TRANSLATION	protein_coding	start	-	5	211	0	1.93	0	52.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026484	Rnf2	ENSMUST00000188871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026484	Rnf2	ENSMUST00000187048	ENSMUSP00000140896	TRANSLATION	protein_coding	-	CCDS15362.1	1	336	8	6.01	14.8	157.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026484	Rnf2	ENSMUST00000185945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042215	Bag2	ENSMUST00000044691	ENSMUSP00000042009	TRANSLATION	protein_coding	-	CCDS14864.1	1	210	0	1	6.3	0	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000042215	Bag2	ENSMUST00000187602	ENSMUSP00000139538	TRANSLATION	protein_coding	-	-	2	57	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000042215	Bag2	ENSMUST00000155484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042215	Bag2	ENSMUST00000189741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026273	Mterf4	ENSMUST00000152307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026273	Mterf4	ENSMUST00000112944	ENSMUSP00000108566	TRANSLATION	protein_coding	-	CCDS78655.1	1	303	0	2.14	0.5	49.6	0	-2,1	-	-	6.936	MINOR
ENSMUSG00000026273	Mterf4	ENSMUST00000112942	ENSMUSP00000108564	TRANSLATION	protein_coding	-	-	2	240	0	2	0	51	0	-2,1	-	-	6.774	MINOR
ENSMUSG00000026273	Mterf4	ENSMUST00000027492	ENSMUSP00000027492	TRANSLATION	protein_coding	-	CCDS35671.1	1	346	0	3.8	0.5	70	0	-2,1	-	-	12	PRINCIPAL:1
ENSMUSG00000026273	Mterf4	ENSMUST00000136754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025981	Coq10b	ENSMUST00000185474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025981	Coq10b	ENSMUST00000185918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025981	Coq10b	ENSMUST00000027125	ENSMUSP00000027125	TRANSLATION	protein_coding	-	CCDS35568.1	1	242	0	1.2	1.5	76.3	0	-4,0	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000025981	Coq10b	ENSMUST00000087617	ENSMUSP00000084899	TRANSLATION	protein_coding	-	CCDS14959.1	1	192	0	1.2	1.7	77.3	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000033701	Acbd6	ENSMUST00000159339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033701	Acbd6	ENSMUST00000194476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033701	Acbd6	ENSMUST00000080138	ENSMUSP00000079035	TRANSLATION	protein_coding	-	CCDS48397.1	1	137	7	2.816	0.5	86.2	0	-4,-5	-	-	8.226	MINOR
ENSMUSG00000033701	Acbd6	ENSMUST00000192730	ENSMUSP00000141762	TRANSLATION	nonsense_mediated_decay	start	-	3	37	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033701	Acbd6	ENSMUST00000035560	ENSMUSP00000049124	TRANSLATION	protein_coding	-	CCDS15385.1	1	282	7	6.43	7.5	149.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033701	Acbd6	ENSMUST00000097529	ENSMUSP00000095136	TRANSLATION	protein_coding	-	CCDS48398.1	1	139	7	3.014	0.5	86.2	0	-4,-5	-	-	8.226	MINOR
ENSMUSG00000041605	Inava	ENSMUST00000194374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041605	Inava	ENSMUST00000195177	ENSMUSP00000141506	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	109.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041605	Inava	ENSMUST00000120339	ENSMUSP00000113785	TRANSLATION	protein_coding	-	CCDS15325.2	1	677	0	0	1.5	186.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041605	Inava	ENSMUST00000153910	ENSMUSP00000120263	TRANSLATION	nonsense_mediated_decay	-	-	3	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041605	Inava	ENSMUST00000144464	ENSMUSP00000115554	TRANSLATION	protein_coding	stop	-	5	200	0	0	0	186.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041605	Inava	ENSMUST00000150163	ENSMUSP00000118074	TRANSLATION	protein_coding	stop	-	3	212	0	0	0	186.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003458	Ncstn	ENSMUST00000146137	ENSMUSP00000120663	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	1.6	0	0	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000003458	Ncstn	ENSMUST00000003550	ENSMUSP00000003550	TRANSLATION	protein_coding	-	CCDS15507.1	1	708	0	16.35	6.3	305.6	2	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000003458	Ncstn	ENSMUST00000140643	ENSMUSP00000119128	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	1.6	0	0	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000003458	Ncstn	ENSMUST00000135928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003458	Ncstn	ENSMUST00000122986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003458	Ncstn	ENSMUST00000142825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026589	Sec16b	ENSMUST00000146873	ENSMUSP00000119359	TRANSLATION	protein_coding	start	-	5	699	0	2.77	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026589	Sec16b	ENSMUST00000111700	ENSMUSP00000107329	TRANSLATION	protein_coding	-	CCDS15400.1	1	1051	0	2.77	0.5	33.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026589	Sec16b	ENSMUST00000155665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026589	Sec16b	ENSMUST00000086130	ENSMUSP00000083300	TRANSLATION	protein_coding	-	CCDS15400.1	1	1051	0	2.77	0.5	33.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026589	Sec16b	ENSMUST00000027881	ENSMUSP00000027881	TRANSLATION	protein_coding	-	CCDS15400.1	1	1051	0	2.77	0.5	33.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055184	Fam72a	ENSMUST00000068613	ENSMUSP00000068111	TRANSLATION	protein_coding	-	CCDS15270.1	1	149	4	0	13.5	269.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000086277	4930558K02Rik	ENSMUST00000162676	ENSMUSP00000124751	TRANSLATION	protein_coding	-	CCDS56649.1	3	182	0	0	0.5	269.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000086277	4930558K02Rik	ENSMUST00000141397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045216	Hs6st1	ENSMUST00000088174	ENSMUSP00000085499	TRANSLATION	protein_coding	-	CCDS48237.1	1	411	0	2	5.3	258.2	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000045216	Hs6st1	ENSMUST00000194670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026479	Lamc2	ENSMUST00000027753	ENSMUSP00000027753	TRANSLATION	protein_coding	-	CCDS15369.1	5	1193	4	5.28	2.7	289.2	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000026479	Lamc2	ENSMUST00000188831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026479	Lamc2	ENSMUST00000189005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026479	Lamc2	ENSMUST00000185328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026479	Lamc2	ENSMUST00000185356	ENSMUSP00000140514	TRANSLATION	protein_coding	-	CCDS15369.1	1	1193	4	5.28	2.7	289.2	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000026479	Lamc2	ENSMUST00000188206	ENSMUSP00000139416	TRANSLATION	protein_coding	start	-	-	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042684	Npl	ENSMUST00000187747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042684	Npl	ENSMUST00000041874	ENSMUSP00000037454	TRANSLATION	protein_coding	-	CCDS15374.1	1	320	11	6.61	0.5	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026142	Rhbdd1	ENSMUST00000140020	ENSMUSP00000137770	TRANSLATION	protein_coding	-	CCDS15097.1	1	315	0	0	4	75.4	2	-1,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000026142	Rhbdd1	ENSMUST00000187475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026142	Rhbdd1	ENSMUST00000027322	ENSMUSP00000027322	TRANSLATION	protein_coding	-	CCDS15097.1	1	315	0	0	4	75.4	2	-1,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000047443	Erfe	ENSMUST00000190998	ENSMUSP00000140509	TRANSLATION	protein_coding	start	-	5	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047443	Erfe	ENSMUST00000086861	ENSMUSP00000084073	TRANSLATION	protein_coding	-	CCDS48323.1	1	340	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000026526	Fh1	ENSMUST00000133218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026526	Fh1	ENSMUST00000027810	ENSMUSP00000027810	TRANSLATION	protein_coding	-	CCDS15547.1	1	507	13	9.75	2.7	509	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000026526	Fh1	ENSMUST00000176740	ENSMUSP00000135385	TRANSLATION	protein_coding	start	-	3	167	3	3.75	0	96.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026526	Fh1	ENSMUST00000154956	ENSMUSP00000135140	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000026526	Fh1	ENSMUST00000130996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026222	Sp100	ENSMUST00000141709	ENSMUSP00000119301	TRANSLATION	protein_coding	start/stop	-	5	136	8	2.55	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000066427	ENSMUSP00000066399	TRANSLATION	protein_coding	-	CCDS35639.1	1	591	0	4.814	0.5	253.8	0	-4,-5	-	-	8.4	PRINCIPAL:1
ENSMUSG00000026222	Sp100	ENSMUST00000155094	ENSMUSP00000118481	TRANSLATION	protein_coding	-	CCDS83568.1	1	482	0	2.264	0.5	220.4	0	-4,-5	-	-	3.996	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000141998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026222	Sp100	ENSMUST00000134283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026222	Sp100	ENSMUST00000145440	ENSMUSP00000120604	TRANSLATION	nonsense_mediated_decay	-	-	2	304	0	0	0	129.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000140758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026222	Sp100	ENSMUST00000150967	ENSMUSP00000122899	TRANSLATION	protein_coding	stop	-	1	418	0	2.33	0	220.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000132641	ENSMUSP00000120267	TRANSLATION	protein_coding	start	-	5	302	8	6.614	0	124.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000054279	ENSMUSP00000051705	TRANSLATION	protein_coding	-	CCDS83567.1	1	348	0	0	0.5	129.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000129951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026222	Sp100	ENSMUST00000153574	ENSMUSP00000122670	TRANSLATION	protein_coding	-	-	5	494	0	3.064	0	220.4	0	-4,-5	-	-	3.996	MINOR
ENSMUSG00000026222	Sp100	ENSMUST00000147552	ENSMUSP00000116942	TRANSLATION	protein_coding	-	CCDS83569.1	1	464	0	2.264	0.5	220.4	0	-4,-5	-	-	3.996	MINOR
ENSMUSG00000016194	Hsd11b1	ENSMUST00000016338	ENSMUSP00000016338	TRANSLATION	protein_coding	-	CCDS15635.1	1	292	29	6.33	3.9	168.5	0	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000016194	Hsd11b1	ENSMUST00000160929	ENSMUSP00000123849	TRANSLATION	protein_coding	-	-	1	262	29	5.33	0	168.5	0	-4,-7	-	-	16.002	MINOR
ENSMUSG00000016194	Hsd11b1	ENSMUST00000159644	ENSMUSP00000124693	TRANSLATION	protein_coding	stop	-	5	214	22	5	0	161.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000016194	Hsd11b1	ENSMUST00000161737	ENSMUSP00000125620	TRANSLATION	protein_coding	-	CCDS15635.1	1	292	29	6.33	3.9	168.5	0	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000016194	Hsd11b1	ENSMUST00000161406	ENSMUSP00000124142	TRANSLATION	protein_coding	start	-	3	80	9	1.1	0	38.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016194	Hsd11b1	ENSMUST00000162842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016194	Hsd11b1	ENSMUST00000191977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026622	Nek2	ENSMUST00000136733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026622	Nek2	ENSMUST00000027931	ENSMUSP00000027931	TRANSLATION	protein_coding	-	CCDS15623.1	1	443	19	5.35	8.8	211	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026622	Nek2	ENSMUST00000126446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026622	Nek2	ENSMUST00000150839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040693	Slco4c1	ENSMUST00000071985	ENSMUSP00000071875	TRANSLATION	protein_coding	-	CCDS35675.1	1	722	0	0	1.5	646.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000053024	Cntn2	ENSMUST00000186487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053024	Cntn2	ENSMUST00000189528	ENSMUSP00000141179	TRANSLATION	nonsense_mediated_decay	start	-	1	34	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053024	Cntn2	ENSMUST00000188143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053024	Cntn2	ENSMUST00000190601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053024	Cntn2	ENSMUST00000186530	ENSMUSP00000139897	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000053024	Cntn2	ENSMUST00000188065	ENSMUSP00000140306	TRANSLATION	nonsense_mediated_decay	start	-	1	544	0	9.47	0	192.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053024	Cntn2	ENSMUST00000086521	ENSMUSP00000083707	TRANSLATION	protein_coding	-	CCDS15288.1	1	1040	0	20.02	1.5	383.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053024	Cntn2	ENSMUST00000188943	ENSMUSP00000139795	TRANSLATION	protein_coding	stop	-	2	102	0	1.75	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000026353	Ubxn4	ENSMUST00000027592	ENSMUSP00000027592	TRANSLATION	protein_coding	-	CCDS15251.1	1	506	0	2.6	1.5	65.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026353	Ubxn4	ENSMUST00000187031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026353	Ubxn4	ENSMUST00000190736	ENSMUSP00000141085	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026353	Ubxn4	ENSMUST00000189895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026112	Coa5	ENSMUST00000192179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026112	Coa5	ENSMUST00000027286	ENSMUSP00000027286	TRANSLATION	protein_coding	-	CCDS35541.1	1	74	0	0	19.5	73.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000050534	Htr5b	ENSMUST00000055884	ENSMUSP00000057212	TRANSLATION	protein_coding	-	CCDS15239.1	1	370	0	1.28	2.7	222.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026455	Klhl12	ENSMUST00000189981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026455	Klhl12	ENSMUST00000116528	ENSMUSP00000112227	TRANSLATION	protein_coding	-	CCDS78687.1	5	568	0	11.35	6.3	497.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000026455	Klhl12	ENSMUST00000027725	ENSMUSP00000027725	TRANSLATION	protein_coding	-	CCDS78687.1	1	568	0	11.35	6.3	497.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000026455	Klhl12	ENSMUST00000133721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026455	Klhl12	ENSMUST00000141458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026455	Klhl12	ENSMUST00000112232	ENSMUSP00000107851	TRANSLATION	protein_coding	-	CCDS35715.1	1	541	0	10.6	0.5	443.8	0	-4,-6	-	-	7.278	MINOR
ENSMUSG00000026068	Il18rap	ENSMUST00000163057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026068	Il18rap	ENSMUST00000027237	ENSMUSP00000027237	TRANSLATION	protein_coding	-	CCDS14912.1	1	614	0	7.42	0.5	182.1	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026068	Il18rap	ENSMUST00000160468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026068	Il18rap	ENSMUST00000159724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038349	Plcl1	ENSMUST00000042986	ENSMUSP00000037854	TRANSLATION	protein_coding	-	CCDS48263.1	1	1096	11	0.8	5.1	490.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038349	Plcl1	ENSMUST00000187059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026100	Mstn	ENSMUST00000027269	ENSMUSP00000027269	TRANSLATION	protein_coding	-	CCDS14950.1	1	376	0	2.3	11.5	203	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026100	Mstn	ENSMUST00000191197	ENSMUSP00000140249	TRANSLATION	protein_coding	-	-	5	189	0	0.9	0	66.2	0	-1,-5	-	-	2.346	MINOR
ENSMUSG00000026198	Abcb6	ENSMUST00000161103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026198	Abcb6	ENSMUST00000160757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026198	Abcb6	ENSMUST00000161215	ENSMUSP00000124630	TRANSLATION	protein_coding	start	-	5	97	1	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026198	Abcb6	ENSMUST00000160081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026198	Abcb6	ENSMUST00000159219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026198	Abcb6	ENSMUST00000027396	ENSMUSP00000027396	TRANSLATION	protein_coding	-	CCDS15065.1	1	842	12	14.61	4.1	489.3	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000019699	Akt3	ENSMUST00000111159	ENSMUSP00000106789	TRANSLATION	protein_coding	-	CCDS35799.1	5	479	18	11.35	16.3	350.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019699	Akt3	ENSMUST00000019843	ENSMUSP00000019843	TRANSLATION	protein_coding	-	-	5	470	18	10.75	0	345.5	0	-4,-5	-	-	16.512	MINOR
ENSMUSG00000019699	Akt3	ENSMUST00000211158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019699	Akt3	ENSMUST00000111160	ENSMUSP00000106790	TRANSLATION	protein_coding	-	CCDS35799.1	1	479	18	11.35	16.3	350.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026564	Dusp27	ENSMUST00000085992	ENSMUSP00000083155	TRANSLATION	protein_coding	-	CCDS15446.1	1	1138	8	1.6	0.5	87.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026564	Dusp27	ENSMUST00000192369	ENSMUSP00000141564	TRANSLATION	protein_coding	-	CCDS15446.1	1	1138	8	1.6	0.5	87.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026535	Ifi202b	ENSMUST00000000266	ENSMUSP00000000266	TRANSLATION	protein_coding	-	CCDS35794.1	1	445	0	4.33	0.5	415.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026548	Slamf9	ENSMUST00000027830	ENSMUSP00000027830	TRANSLATION	protein_coding	-	CCDS15514.1	1	285	0	1.12	1.5	40.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000041577	Prelp	ENSMUST00000127583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041577	Prelp	ENSMUST00000048432	ENSMUSP00000048803	TRANSLATION	protein_coding	-	CCDS15300.1	1	378	0	1	1.5	118.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026279	Thap4	ENSMUST00000189472	ENSMUSP00000139747	TRANSLATION	protein_coding	start	-	2	182	8	3.08	0	107.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026279	Thap4	ENSMUST00000189728	ENSMUSP00000143943	TRANSLATION	protein_coding	-	CCDS78657.1	2	165	14	4.08	5.3	144.6	0	-4,-7	-	-	11.486	MINOR
ENSMUSG00000026279	Thap4	ENSMUST00000190116	ENSMUSP00000140761	TRANSLATION	protein_coding	-	CCDS15194.1	1	569	19	4.605	1.5	213.4	0	-4,-7	-	-	18.232	PRINCIPAL:1
ENSMUSG00000026279	Thap4	ENSMUST00000112905	ENSMUSP00000108526	TRANSLATION	nonsense_mediated_decay	-	-	1	379	5	0.525	0	68.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026279	Thap4	ENSMUST00000187445	ENSMUSP00000140243	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026279	Thap4	ENSMUST00000189173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000192762	ENSMUSP00000142031	TRANSLATION	protein_coding	start/stop	-	5	227	0	2.59	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040782	Cop1	ENSMUST00000193776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000192597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000192044	ENSMUSP00000141490	TRANSLATION	protein_coding	start/stop	-	3	155	0	4.58	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040782	Cop1	ENSMUST00000194713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000195044	ENSMUSP00000141200	TRANSLATION	protein_coding	stop	-	3	202	0	4.26	0	16.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040782	Cop1	ENSMUST00000192215	ENSMUSP00000141285	TRANSLATION	protein_coding	start/stop	-	5	346	8	4.06	0	57.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040782	Cop1	ENSMUST00000194798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000195800	ENSMUSP00000141941	TRANSLATION	nonsense_mediated_decay	-	-	3	159	5	1.03	0	31.8	0	-3,1	-	-	-1	MINOR
ENSMUSG00000040782	Cop1	ENSMUST00000192841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000194049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040782	Cop1	ENSMUST00000076894	ENSMUSP00000076160	TRANSLATION	protein_coding	-	CCDS35745.1	1	733	8	12.63	3.9	131.5	0	-3,1	-	-	19	PRINCIPAL:1
ENSMUSG00000040782	Cop1	ENSMUST00000195554	ENSMUSP00000141561	TRANSLATION	nonsense_mediated_decay	start	-	3	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037860	Aim2	ENSMUST00000147604	ENSMUSP00000119465	TRANSLATION	protein_coding	-	CCDS15529.2	5	354	0	4.16	1.5	276.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037860	Aim2	ENSMUST00000151176	ENSMUSP00000121333	TRANSLATION	protein_coding	stop	-	5	80	0	1	0	54.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037860	Aim2	ENSMUST00000173023	ENSMUSP00000134329	TRANSLATION	protein_coding	stop	-	1	94	0	1.66	0	54.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037860	Aim2	ENSMUST00000174263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037860	Aim2	ENSMUST00000192575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037860	Aim2	ENSMUST00000135370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037860	Aim2	ENSMUST00000166137	ENSMUSP00000132253	TRANSLATION	protein_coding	-	CCDS15529.2	5	354	0	4.16	1.5	276.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025776	Crispld1	ENSMUST00000095075	ENSMUSP00000092686	TRANSLATION	protein_coding	-	CCDS35519.1	1	500	2	5.35	8.8	249.7	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000025776	Crispld1	ENSMUST00000160305	ENSMUSP00000123800	TRANSLATION	protein_coding	stop	-	3	163	1	1.7	0	39.1	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025776	Crispld1	ENSMUST00000159958	ENSMUSP00000124095	TRANSLATION	protein_coding	-	CCDS35519.1	1	500	2	5.35	8.8	249.7	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000055866	Per2	ENSMUST00000069620	ENSMUSP00000066620	TRANSLATION	protein_coding	-	CCDS35663.1	1	1257	0	10.25	1.5	345.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055866	Per2	ENSMUST00000185298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015962	1700016C15Rik	ENSMUST00000016106	ENSMUSP00000016106	TRANSLATION	protein_coding	-	CCDS48462.1	1	145	0	0	3.9	0	0	-4,-2	-	-	1	PRINCIPAL:1
ENSMUSG00000050229	Pigm	ENSMUST00000052455	ENSMUSP00000052838	TRANSLATION	protein_coding	-	CCDS15513.1	-	423	0	0	5.1	365.8	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000026389	Steap3	ENSMUST00000112640	ENSMUSP00000108259	TRANSLATION	protein_coding	-	CCDS48343.1	1	488	19	1.6	3.9	110.8	6	-4,-5	-	-	18.808	PRINCIPAL:2
ENSMUSG00000026389	Steap3	ENSMUST00000112641	ENSMUSP00000108260	TRANSLATION	protein_coding	-	CCDS48343.1	1	488	19	1.6	3.9	110.8	6	-4,-5	-	-	18.808	PRINCIPAL:2
ENSMUSG00000026389	Steap3	ENSMUST00000112643	ENSMUSP00000108262	TRANSLATION	protein_coding	-	-	1	526	19	1.6	0.5	110.8	6	-4,-5	-	-	17.808	ALTERNATIVE:2
ENSMUSG00000026389	Steap3	ENSMUST00000140490	ENSMUSP00000121046	TRANSLATION	protein_coding	stop	-	1	418	19	1.6	0	114	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000026389	Steap3	ENSMUST00000112639	ENSMUSP00000108258	TRANSLATION	protein_coding	-	CCDS48343.1	1	488	19	1.6	3.9	110.8	6	-4,-5	-	-	18.808	PRINCIPAL:2
ENSMUSG00000026443	Lrrn2	ENSMUST00000027706	ENSMUSP00000027706	TRANSLATION	protein_coding	-	CCDS15289.1	1	730	0	0.28	0.5	185.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026443	Lrrn2	ENSMUST00000159088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015829	Tnr	ENSMUST00000195199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015829	Tnr	ENSMUST00000192457	ENSMUSP00000141509	TRANSLATION	protein_coding	start/stop	-	5	181	0	2.02	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015829	Tnr	ENSMUST00000193325	ENSMUSP00000141752	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015829	Tnr	ENSMUST00000192069	ENSMUSP00000141553	TRANSLATION	protein_coding	-	CCDS15403.1	1	1358	7	14.1	7.8	680.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015829	Tnr	ENSMUST00000111669	ENSMUSP00000107298	TRANSLATION	protein_coding	-	CCDS15403.1	5	1358	7	14.1	7.8	680.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026546	Cfap45	ENSMUST00000159395	ENSMUSP00000125224	TRANSLATION	protein_coding	stop	-	3	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026546	Cfap45	ENSMUST00000194051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026546	Cfap45	ENSMUST00000162988	ENSMUSP00000124654	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026546	Cfap45	ENSMUST00000160531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026546	Cfap45	ENSMUST00000159792	ENSMUSP00000124540	TRANSLATION	protein_coding	stop	-	3	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026546	Cfap45	ENSMUST00000085894	ENSMUSP00000083057	TRANSLATION	protein_coding	-	CCDS48447.1	1	551	0	0	2.7	279.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000026546	Cfap45	ENSMUST00000161140	ENSMUSP00000125225	TRANSLATION	protein_coding	stop	-	2	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026546	Cfap45	ENSMUST00000160303	ENSMUSP00000124646	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090124	Ugt1a7c	ENSMUST00000126203	ENSMUSP00000116653	TRANSLATION	nonsense_mediated_decay	-	-	3	132	4	1.24	0	77	0	2,-2	-	-	-1	MINOR
ENSMUSG00000090124	Ugt1a7c	ENSMUST00000058237	ENSMUSP00000058683	TRANSLATION	protein_coding	-	CCDS15139.1	1	531	18	3.75	1.5	773.2	1	2,-2	-	-	17.76	PRINCIPAL:3
ENSMUSG00000090124	Ugt1a7c	ENSMUST00000150634	ENSMUSP00000123452	TRANSLATION	protein_coding	stop	-	3	207	18	3.75	0	297.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000090124	Ugt1a7c	ENSMUST00000113135	ENSMUSP00000108760	TRANSLATION	protein_coding	-	CCDS48314.1	1	531	18	3.87	1.7	765.8	1	4,-1	-	-	17.556	ALTERNATIVE:2
ENSMUSG00000026577	Blzf1	ENSMUST00000120447	ENSMUSP00000113479	TRANSLATION	protein_coding	-	CCDS48423.1	1	403	0	0	7.5	37.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026577	Blzf1	ENSMUST00000124007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026577	Blzf1	ENSMUST00000086032	ENSMUSP00000083196	TRANSLATION	protein_coding	-	CCDS48423.1	1	403	0	0	7.5	37.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026577	Blzf1	ENSMUST00000148884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026577	Blzf1	ENSMUST00000027866	ENSMUSP00000027866	TRANSLATION	protein_coding	-	CCDS15435.1	1	410	0	0	0.5	37.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000025945	Crygf	ENSMUST00000027082	ENSMUSP00000027082	TRANSLATION	protein_coding	-	CCDS15018.1	1	174	3	3	8.8	210.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025945	Crygf	ENSMUST00000114027	ENSMUSP00000109661	TRANSLATION	protein_coding	-	-	2	114	3	1.3	0	97	0	-4,-5	-	-	5.598	MINOR
ENSMUSG00000054770	Kctd18	ENSMUST00000114410	ENSMUSP00000110052	TRANSLATION	protein_coding	-	CCDS48269.1	1	429	0	1.44	0.5	50.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054770	Kctd18	ENSMUST00000164963	ENSMUSP00000130952	TRANSLATION	protein_coding	-	CCDS48268.1	5	262	0	0.64	0.5	0	0	-4,-5	-	-	2.664	MINOR
ENSMUSG00000054770	Kctd18	ENSMUST00000163006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054770	Kctd18	ENSMUST00000162410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054770	Kctd18	ENSMUST00000161608	ENSMUSP00000125153	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	1.44	0	50.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054770	Kctd18	ENSMUST00000189298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054770	Kctd18	ENSMUST00000068000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054770	Kctd18	ENSMUST00000163061	ENSMUSP00000124053	TRANSLATION	nonsense_mediated_decay	-	-	5	129	0	1.44	0	50.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054770	Kctd18	ENSMUST00000159826	ENSMUSP00000125245	TRANSLATION	protein_coding	stop	-	5	179	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054770	Kctd18	ENSMUST00000160130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054770	Kctd18	ENSMUST00000160614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026121	Sema4c	ENSMUST00000195620	ENSMUSP00000141527	TRANSLATION	protein_coding	-	CCDS48240.1	1	834	0	10.4	7.5	530	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026121	Sema4c	ENSMUST00000191785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026121	Sema4c	ENSMUST00000114991	ENSMUSP00000110643	TRANSLATION	protein_coding	-	CCDS48240.1	1	834	0	10.4	7.5	530	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026121	Sema4c	ENSMUST00000195339	ENSMUSP00000141833	TRANSLATION	protein_coding	stop	-	1	36	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026121	Sema4c	ENSMUST00000193382	ENSMUSP00000142034	TRANSLATION	protein_coding	stop	-	5	37	0	0.4	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026121	Sema4c	ENSMUST00000195160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026121	Sema4c	ENSMUST00000191642	ENSMUSP00000142284	TRANSLATION	protein_coding	-	CCDS48240.1	5	834	0	10.4	7.5	530	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026121	Sema4c	ENSMUST00000191677	ENSMUSP00000141263	TRANSLATION	protein_coding	-	CCDS48240.1	5	834	0	10.4	7.5	530	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000109510	Gm42417	ENSMUST00000191849	ENSMUSP00000142202	TRANSLATION	protein_coding,RT	-	-	1	126	0	3.2	0	55.8	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000109510	Gm42417	ENSMUST00000207088	ENSMUSP00000146551	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000061584	Lyg2	ENSMUST00000078307	ENSMUSP00000077422	TRANSLATION	protein_coding	-	CCDS14897.1	1	213	0	2.96	5.1	0	0	3,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000045381	Olfr433	ENSMUST00000214690	ENSMUSP00000149005	TRANSLATION	protein_coding	-	CCDS15535.1	5	314	0	0.2	5.1	172.3	7	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045381	Olfr433	ENSMUST00000052975	ENSMUSP00000056772	TRANSLATION	protein_coding	-	CCDS15535.1	-	314	0	0.2	5.1	172.3	7	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073702	Rpl31	ENSMUST00000086535	ENSMUSP00000083722	TRANSLATION	protein_coding	-	CCDS14904.1	1	125	0	3.424	19.5	179	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000073702	Rpl31	ENSMUST00000194746	ENSMUSP00000141808	TRANSLATION	protein_coding	-	-	1	129	0	3.294	0	179	0	-4,-5	-	-	11.742	MINOR
ENSMUSG00000073702	Rpl31	ENSMUST00000179954	ENSMUSP00000137631	TRANSLATION	protein_coding	-	CCDS14904.1	1	125	0	3.424	19.5	179	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000073702	Rpl31	ENSMUST00000195123	ENSMUSP00000142039	TRANSLATION	protein_coding	-	-	3	87	0	2	0	131.1	0	-4,-5	-	-	6.276	MINOR
ENSMUSG00000073702	Rpl31	ENSMUST00000178079	ENSMUSP00000136354	TRANSLATION	protein_coding	-	CCDS14904.1	2	125	0	3.424	19.5	179	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000073702	Rpl31	ENSMUST00000191855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071890	Mroh9	ENSMUST00000096608	ENSMUSP00000094365	TRANSLATION	protein_coding	-	CCDS48419.1	1	891	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026277	Stk25	ENSMUST00000186287	ENSMUSP00000140396	TRANSLATION	protein_coding	stop	-	5	106	16	1.83	0	71	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026277	Stk25	ENSMUST00000027498	ENSMUSP00000027498	TRANSLATION	protein_coding	-	CCDS15192.1	1	426	21	6.58	10.3	236.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026277	Stk25	ENSMUST00000151068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026277	Stk25	ENSMUST00000154008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026277	Stk25	ENSMUST00000125778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026277	Stk25	ENSMUST00000133769	ENSMUSP00000117765	TRANSLATION	protein_coding	stop	-	5	234	21	4.83	0	210.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038026	Kcnj9	ENSMUST00000062387	ENSMUSP00000060110	TRANSLATION	protein_coding	-	CCDS35783.1	1	393	0	2	5.1	465.5	2	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038026	Kcnj9	ENSMUST00000194204	ENSMUSP00000141633	TRANSLATION	protein_coding	-	CCDS35783.1	1	393	0	2	5.1	465.5	2	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038026	Kcnj9	ENSMUST00000194860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027209	Fam227b	ENSMUST00000110446	ENSMUSP00000106076	TRANSLATION	protein_coding	-	CCDS50697.1	5	532	0	0	0.5	167.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000027209	Fam227b	ENSMUST00000156413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027209	Fam227b	ENSMUST00000110448	ENSMUSP00000106078	TRANSLATION	protein_coding	-	-	5	532	0	0	0.5	167.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027209	Fam227b	ENSMUST00000178118	ENSMUSP00000136349	TRANSLATION	protein_coding	-	CCDS50697.1	5	532	0	0	0.5	167.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000083855	Olfr1175	ENSMUST00000214207	ENSMUSP00000154642	TRANSLATION	protein_coding	-	-	5	320	0	0	0.5	158.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027002	Nckap1	ENSMUST00000134587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027002	Nckap1	ENSMUST00000111760	ENSMUSP00000107390	TRANSLATION	protein_coding	-	CCDS71082.1	1	1134	0	28.085	15.3	1722.6	1	-4,-7	-	-	14.75	MINOR
ENSMUSG00000027002	Nckap1	ENSMUST00000154793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027002	Nckap1	ENSMUST00000028386	ENSMUSP00000028386	TRANSLATION	protein_coding	-	CCDS16177.1	1	1128	0	28.25	16.3	1733.6	1	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000027002	Nckap1	ENSMUST00000131872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075174	Olfr1087	ENSMUST00000214141	ENSMUSP00000149439	TRANSLATION	protein_coding	-	CCDS16265.1	5	313	0	0.2	3.9	165.5	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075174	Olfr1087	ENSMUST00000099877	ENSMUSP00000097462	TRANSLATION	protein_coding	-	CCDS16265.1	-	313	0	0.2	3.9	165.5	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027523	Gnas	ENSMUST00000133356	ENSMUSP00000158849	TRANSLATION	protein_coding	-	-	3	32	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109095	ENSMUSP00000104723	TRANSLATION	protein_coding	-	CCDS17149.1	1	253	0	0	0.5	511.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109088	ENSMUSP00000104716	TRANSLATION	protein_coding	-	CCDS50817.1	1	725	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109084	ENSMUSP00000104712	TRANSLATION	protein_coding	-	-	1	379	24	9.91	14	363.3	0	-4,-5	-	-	14.998	ALTERNATIVE:1
ENSMUSG00000027523	Gnas	ENSMUST00000185956	ENSMUSP00000140174	TRANSLATION	protein_coding	-	CCDS17151.1	1	1133	24	8.91	0.5	347.2	0	-4,-5	-	-	9	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000186907	ENSMUSP00000139839	TRANSLATION	protein_coding	-	CCDS50817.1	1	725	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000130940	ENSMUSP00000118210	TRANSLATION	protein_coding	start	-	5	59	0	0	0	95.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000080493	ENSMUSP00000079341	TRANSLATION	protein_coding	-	CCDS17151.1	1	1133	24	8.91	0.5	347.2	0	-4,-5	-	-	9	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109096	ENSMUSP00000104724	TRANSLATION	protein_coding	-	CCDS17149.1	1	253	0	0	0.5	511.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000129534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027523	Gnas	ENSMUST00000238318	ENSMUSP00000158766	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	1.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109085	ENSMUSP00000104713	TRANSLATION	protein_coding	-	CCDS38357.1	1	380	24	9.91	14	360.2	0	-4,-5	-	-	14.998	ALTERNATIVE:1
ENSMUSG00000027523	Gnas	ENSMUST00000154658	ENSMUSP00000158758	TRANSLATION	nonsense_mediated_decay	-	-	1	827	0	0.198	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000238525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027523	Gnas	ENSMUST00000180362	ENSMUSP00000136180	TRANSLATION	protein_coding	-	CCDS17149.1	5	253	0	0	0.5	511.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000238267	ENSMUSP00000158626	TRANSLATION	protein_coding	-	-	-	237	17	5.38	0	242.9	0	-4,-5	-	-	1.332	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000238660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027523	Gnas	ENSMUST00000149016	ENSMUSP00000158589	TRANSLATION	protein_coding	-	-	1	277	0	0	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000109087	ENSMUSP00000104715	TRANSLATION	protein_coding	-	CCDS38356.1	1	394	24	10.41	7.5	353.6	0	-4,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000027523	Gnas	ENSMUST00000109083	ENSMUSP00000104711	TRANSLATION	protein_coding	-	-	2	91	7	2.83	2.4	49.7	0	-4,-5	-	-	0.432	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000087876	ENSMUSP00000085184	TRANSLATION	protein_coding	-	CCDS38354.1	1	1119	24	8.41	0.5	353.8	0	-4,-5	-	-	7.998	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000148640	ENSMUSP00000158579	TRANSLATION	protein_coding	stop	-	5	153	7	4.5	0	93.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000087877	ENSMUSP00000085185	TRANSLATION	protein_coding	-	CCDS38355.1	1	876	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000156623	ENSMUSP00000158707	TRANSLATION	protein_coding	-	-	1	335	17	8.58	5.3	301.6	0	-4,-5	-	-	4.996	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000130761	ENSMUSP00000122230	TRANSLATION	protein_coding	start	-	3	25	0	0	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000124935	ENSMUSP00000158709	TRANSLATION	protein_coding	stop	-	3	140	2	4	0	75.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027523	Gnas	ENSMUST00000131125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027523	Gnas	ENSMUST00000087871	ENSMUSP00000085179	TRANSLATION	protein_coding	-	CCDS38356.1	1	394	24	10.41	7.5	353.6	0	-4,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000043274	Olfr1123	ENSMUST00000214663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043274	Olfr1123	ENSMUST00000054974	ENSMUSP00000058786	TRANSLATION	protein_coding	-	CCDS16290.1	-	323	0	0.24	1.5	173.8	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000043274	Olfr1123	ENSMUST00000216208	ENSMUSP00000154459	TRANSLATION	protein_coding	-	-	2	321	0	0.24	0	173.8	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027596	a	ENSMUST00000109697	ENSMUSP00000105319	TRANSLATION	protein_coding	-	CCDS16941.1	5	131	0	0.8	5.1	99.8	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000027596	a	ENSMUST00000148402	ENSMUSP00000121072	TRANSLATION	protein_coding	stop	-	5	76	0	0	0	23.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000027596	a	ENSMUST00000148300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027596	a	ENSMUST00000132342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027596	a	ENSMUST00000137333	ENSMUSP00000122261	TRANSLATION	protein_coding	stop	-	1	70	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000027596	a	ENSMUST00000029123	ENSMUSP00000029123	TRANSLATION	protein_coding	-	CCDS16941.1	1	131	0	0.8	5.1	99.8	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000075202	Olfr1042	ENSMUST00000215624	ENSMUSP00000151053	TRANSLATION	protein_coding	-	CCDS16240.1	-	313	0	0.2	5.1	164.4	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075202	Olfr1042	ENSMUST00000099908	ENSMUSP00000097492	TRANSLATION	protein_coding	-	CCDS16240.1	5	313	0	0.2	5.1	164.4	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000033411	Ctdspl2	ENSMUST00000128883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033411	Ctdspl2	ENSMUST00000127265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033411	Ctdspl2	ENSMUST00000131258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033411	Ctdspl2	ENSMUST00000140570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033411	Ctdspl2	ENSMUST00000110578	ENSMUSP00000106207	TRANSLATION	protein_coding	-	CCDS71130.1	1	464	10	4.6	12.8	187.2	0	-4,-2	-	-	22	ALTERNATIVE:1
ENSMUSG00000033411	Ctdspl2	ENSMUST00000036647	ENSMUSP00000047543	TRANSLATION	protein_coding	-	CCDS16652.1	1	465	10	4.6	12.8	187.2	0	-4,-1	-	-	22	PRINCIPAL:3
ENSMUSG00000033411	Ctdspl2	ENSMUST00000138920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033411	Ctdspl2	ENSMUST00000110574	ENSMUSP00000106203	TRANSLATION	protein_coding	-	CCDS16652.1	5	465	10	4.6	12.8	187.2	0	-4,-1	-	-	22	PRINCIPAL:3
ENSMUSG00000033411	Ctdspl2	ENSMUST00000110572	ENSMUSP00000106201	TRANSLATION	protein_coding	-	-	5	394	10	4.6	0	187.2	0	-4,-1	-	-	18	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000005233	ENSMUSP00000005233	TRANSLATION	protein_coding	-	CCDS16576.1	1	1648	17	20.784	0.5	336.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005102	Eif2ak4	ENSMUST00000110877	ENSMUSP00000106501	TRANSLATION	protein_coding	-	-	1	653	5	5.994	0	168.7	0	-4,-2	-	-	0	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000110869	ENSMUSP00000106493	TRANSLATION	protein_coding	-	-	1	347	4	5.28	0	98.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000110870	ENSMUSP00000106494	TRANSLATION	protein_coding	-	-	1	1370	17	16.654	0	260.1	0	-4,-5	-	-	7.41	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000102527	ENSMUSP00000099586	TRANSLATION	protein_coding	-	CCDS50669.1	1	1536	17	17.454	0.5	260.1	0	-4,-7	-	-	7.41	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000125281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005102	Eif2ak4	ENSMUST00000110872	ENSMUSP00000106496	TRANSLATION	protein_coding	-	-	1	1527	17	16.654	0	260.1	0	-4,-5	-	-	7.41	MINOR
ENSMUSG00000005102	Eif2ak4	ENSMUST00000110874	ENSMUSP00000106498	TRANSLATION	protein_coding	-	-	5	1570	17	18.454	0	287.6	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000108931	Olfr1284	ENSMUST00000209096	ENSMUSP00000147014	TRANSLATION	protein_coding	-	CCDS16524.1	-	311	0	0.3	3.9	152	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000108931	Olfr1284	ENSMUST00000062407	ENSMUSP00000052153	TRANSLATION	protein_coding	-	CCDS16524.1	5	311	0	0.3	3.9	152	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000048226	Olfr1212	ENSMUST00000055895	ENSMUSP00000052837	TRANSLATION	protein_coding	-	CCDS16357.1	-	311	0	0.16	1.5	157.2	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048226	Olfr1212	ENSMUST00000215781	ENSMUSP00000149781	TRANSLATION	protein_coding	-	CCDS16357.1	5	311	0	0.16	1.5	157.2	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000084336	Olfr1269	ENSMUST00000214404	ENSMUSP00000150655	TRANSLATION	protein_coding	-	CCDS16406.1	5	309	0	0	6.4	169.3	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000084336	Olfr1269	ENSMUST00000099756	ENSMUSP00000097345	TRANSLATION	protein_coding	-	CCDS16406.1	-	309	0	0	6.4	169.3	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000084336	Olfr1269	ENSMUST00000216493	ENSMUSP00000150470	TRANSLATION	protein_coding	-	CCDS16406.1	5	309	0	0	6.4	169.3	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000017721	Pigt	ENSMUST00000103101	ENSMUSP00000099390	TRANSLATION	protein_coding	-	CCDS17038.2	1	582	0	0	2.7	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000017721	Pigt	ENSMUST00000117066	ENSMUSP00000112577	TRANSLATION	protein_coding	-	-	1	435	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000017721	Pigt	ENSMUST00000131976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017721	Pigt	ENSMUST00000138038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017721	Pigt	ENSMUST00000152522	ENSMUSP00000115362	TRANSLATION	nonsense_mediated_decay	start	-	5	143	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000075093	Olfr1231	ENSMUST00000099786	ENSMUSP00000097374	TRANSLATION	protein_coding	-	CCDS16374.1	-	313	0	0.2	1.7	145.5	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075093	Olfr1231	ENSMUST00000216144	ENSMUSP00000150310	TRANSLATION	protein_coding	-	CCDS16374.1	3	313	0	0.2	1.7	145.5	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000046854	Pip5kl1	ENSMUST00000134204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046854	Pip5kl1	ENSMUST00000055304	ENSMUSP00000051282	TRANSLATION	protein_coding	-	CCDS15920.1	1	395	2	3.7248	0.5	212.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046854	Pip5kl1	ENSMUST00000124980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046854	Pip5kl1	ENSMUST00000100188	ENSMUSP00000097763	TRANSLATION	nonsense_mediated_decay	-	-	1	366	2	3.3048	0	165.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096337	Gm13694	ENSMUST00000178533	ENSMUSP00000135979	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096337	Gm13694	ENSMUST00000178655	ENSMUSP00000136971	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000070883	Ccdc173	ENSMUST00000148190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070883	Ccdc173	ENSMUST00000094942	ENSMUSP00000092548	TRANSLATION	protein_coding	-	CCDS38138.1	1	547	0	0	1.5	55.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026944	Abca2	ENSMUST00000125520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026944	Abca2	ENSMUST00000143075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026944	Abca2	ENSMUST00000149385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026944	Abca2	ENSMUST00000102919	ENSMUSP00000099983	TRANSLATION	protein_coding	-	CCDS15773.1	1	2433	22	7.5	1.5	389.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026944	Abca2	ENSMUST00000150550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026944	Abca2	ENSMUST00000144560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026944	Abca2	ENSMUST00000141065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039826	Trub2	ENSMUST00000048044	ENSMUSP00000041848	TRANSLATION	protein_coding	-	CCDS15856.1	1	331	0	3.15	2.9	92.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039826	Trub2	ENSMUST00000176312	ENSMUSP00000134787	TRANSLATION	nonsense_mediated_decay	-	-	3	121	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039826	Trub2	ENSMUST00000156846	ENSMUSP00000135464	TRANSLATION	nonsense_mediated_decay	-	-	1	121	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039826	Trub2	ENSMUST00000148120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039826	Trub2	ENSMUST00000175644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039826	Trub2	ENSMUST00000113803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039826	Trub2	ENSMUST00000176167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039826	Trub2	ENSMUST00000113807	ENSMUSP00000109438	TRANSLATION	protein_coding	-	-	1	204	0	2.17	0	51.3	0	-4,-7	-	-	7.368	MINOR
ENSMUSG00000039826	Trub2	ENSMUST00000177133	ENSMUSP00000135893	TRANSLATION	nonsense_mediated_decay	-	-	2	121	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039826	Trub2	ENSMUST00000177467	ENSMUSP00000135521	TRANSLATION	protein_coding	-	CCDS71016.1	3	194	0	2.17	0.5	51	0	-4,-7	-	-	7.344	MINOR
ENSMUSG00000094336	Gm13693	ENSMUST00000179448	ENSMUSP00000136590	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000094336	Gm13693	ENSMUST00000178960	ENSMUSP00000136546	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000075383	Olfr351	ENSMUST00000100150	ENSMUSP00000097727	TRANSLATION	protein_coding	-	CCDS15984.1	-	310	0	0.42	5.2	189.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075383	Olfr351	ENSMUST00000215137	ENSMUSP00000150346	TRANSLATION	protein_coding	-	CCDS15984.1	5	310	0	0.42	5.2	189.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075383	Olfr351	ENSMUST00000213676	ENSMUSP00000149369	TRANSLATION	protein_coding	-	CCDS15984.1	5	310	0	0.42	5.2	189.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000094266	Olfr340	ENSMUST00000072854	ENSMUSP00000072632	TRANSLATION	protein_coding	-	CCDS15973.1	-	312	0	0.42	1.5	188.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050023	Olfr1176	ENSMUST00000057439	ENSMUSP00000053353	TRANSLATION	protein_coding	-	CCDS16331.1	-	315	0	0	2.9	155.7	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050023	Olfr1176	ENSMUST00000213778	ENSMUSP00000149943	TRANSLATION	protein_coding	-	CCDS16331.1	5	315	0	0	2.9	155.7	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000095545	Zfp969	ENSMUST00000179061	ENSMUSP00000136479	TRANSLATION	protein_coding	-	-	3	485	53	2.05	0.5	316.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000095545	Zfp969	ENSMUST00000131041	ENSMUSP00000119079	TRANSLATION	protein_coding	-	-	2	83	0	1.45	0	73.1	0	-4,-6	-	-	4.242	MINOR
ENSMUSG00000095545	Zfp969	ENSMUST00000109027	ENSMUSP00000104655	TRANSLATION	protein_coding	-	-	3	138	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026955	Sapcd2	ENSMUST00000114293	ENSMUSP00000109932	TRANSLATION	protein_coding	-	CCDS70999.1	1	391	0	0	0.5	100.1	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000026955	Sapcd2	ENSMUST00000100323	ENSMUSP00000097898	TRANSLATION	protein_coding	-	-	2	446	0	0	0.5	100.1	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000026955	Sapcd2	ENSMUST00000132539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026955	Sapcd2	ENSMUST00000129214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026955	Sapcd2	ENSMUST00000155310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026955	Sapcd2	ENSMUST00000137171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026955	Sapcd2	ENSMUST00000028329	ENSMUSP00000028329	TRANSLATION	protein_coding	-	CCDS38073.1	1	425	0	0	0.5	100.1	0	-4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000089739	Gm20431	ENSMUST00000125544	ENSMUSP00000118416	TRANSLATION	protein_coding,RT	-	-	5	371	0	3	1.2	270.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040479	Dgkz	ENSMUST00000126473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040479	Dgkz	ENSMUST00000099709	ENSMUSP00000106937	TRANSLATION	protein_coding	-	-	5	946	17	5.7418	2.7	344.3	0	-4,-6	-	-	18.642	MINOR
ENSMUSG00000040479	Dgkz	ENSMUST00000142090	ENSMUSP00000119615	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040479	Dgkz	ENSMUST00000142231	ENSMUSP00000114740	TRANSLATION	nonsense_mediated_decay	-	-	1	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040479	Dgkz	ENSMUST00000134103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040479	Dgkz	ENSMUST00000128152	ENSMUSP00000118684	TRANSLATION	nonsense_mediated_decay	-	-	5	134	6	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040479	Dgkz	ENSMUST00000148297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040479	Dgkz	ENSMUST00000239257	ENSMUSP00000159231	TRANSLATION	protein_coding	-	-	-	934	17	5.7418	6.3	344.3	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000040479	Dgkz	ENSMUST00000028667	ENSMUSP00000028667	TRANSLATION	protein_coding	-	CCDS16441.1	1	929	17	5.7418	6.3	344.3	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000040479	Dgkz	ENSMUST00000130023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040479	Dgkz	ENSMUST00000128902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040479	Dgkz	ENSMUST00000138894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040479	Dgkz	ENSMUST00000124427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040479	Dgkz	ENSMUST00000111303	ENSMUSP00000106934	TRANSLATION	protein_coding	-	CCDS50643.1	1	1123	17	5.7418	1.5	343.9	0	-4,-2	-	-	18.164	MINOR
ENSMUSG00000066798	Zbtb6	ENSMUST00000053098	ENSMUSP00000056100	TRANSLATION	protein_coding	-	CCDS16000.1	1	423	16	0	7.5	117.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066798	Zbtb6	ENSMUST00000112932	ENSMUSP00000108554	TRANSLATION	protein_coding	-	CCDS16000.1	2	423	16	0	7.5	117.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075069	Olfr1264	ENSMUST00000216616	ENSMUSP00000149126	TRANSLATION	protein_coding	-	CCDS16403.1	5	308	0	0.28	3.9	159.9	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075069	Olfr1264	ENSMUST00000099758	ENSMUSP00000097347	TRANSLATION	protein_coding	-	CCDS16403.1	-	308	0	0.28	3.9	159.9	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027547	Sall4	ENSMUST00000103074	ENSMUSP00000099363	TRANSLATION	protein_coding	-	CCDS17116.1	1	623	11	0.6	0.5	48.1	0	-4,-5	-	-	2.556	MINOR
ENSMUSG00000027547	Sall4	ENSMUST00000150588	ENSMUSP00000119628	TRANSLATION	protein_coding	start/stop	-	2	131	8	0.64	0	54.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027547	Sall4	ENSMUST00000137536	ENSMUSP00000115646	TRANSLATION	protein_coding	stop	-	2	215	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027547	Sall4	ENSMUST00000130640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027547	Sall4	ENSMUST00000075044	ENSMUSP00000074556	TRANSLATION	protein_coding	-	CCDS17117.1	1	278	8	0.6	0.5	48.1	0	-4,-5	-	-	2.556	MINOR
ENSMUSG00000027547	Sall4	ENSMUST00000029061	ENSMUSP00000029061	TRANSLATION	protein_coding	-	CCDS17115.1	1	1067	31	1.44	0.5	147.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027547	Sall4	ENSMUST00000125138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026963	Tmem210	ENSMUST00000028340	ENSMUSP00000028340	TRANSLATION	protein_coding	-	CCDS50527.1	1	147	0	0	0.5	207.9	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026963	Tmem210	ENSMUST00000144102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107167	Gm34653	ENSMUST00000201786	ENSMUSP00000149256	TRANSLATION	protein_coding	-	-	5	368	0	0	2.7	113.2	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000076437	Selenoh	ENSMUST00000117299	ENSMUSP00000112635	TRANSLATION	protein_coding	-	CCDS16187.1	1	116	0	0	1.5	38	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000076437	Selenoh	ENSMUST00000189988	ENSMUSP00000139492	TRANSLATION	protein_coding	-	-	3	101	0	0	0	25.6	0	-4,-7	-	-	4.044	MINOR
ENSMUSG00000076437	Selenoh	ENSMUST00000189636	ENSMUSP00000139830	TRANSLATION	protein_coding	-	-	3	123	0	0	0	35.4	0	-4,-7	-	-	5.592	ALTERNATIVE:2
ENSMUSG00000076437	Selenoh	ENSMUST00000102646	ENSMUSP00000099706	TRANSLATION	protein_coding	-	CCDS16187.1	1	116	0	0	1.5	38	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000076437	Selenoh	ENSMUST00000154179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076437	Selenoh	ENSMUST00000102647	ENSMUSP00000099707	TRANSLATION	protein_coding	-	CCDS16187.1	1	116	0	0	1.5	38	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000094858	Olfr1297	ENSMUST00000213398	ENSMUSP00000150543	TRANSLATION	protein_coding	-	CCDS16530.1	2	312	0	0.36	3.9	162.4	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000094858	Olfr1297	ENSMUST00000099612	ENSMUSP00000097207	TRANSLATION	protein_coding	-	CCDS16530.1	-	312	0	0.36	3.9	162.4	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000026941	Mamdc4	ENSMUST00000152124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026941	Mamdc4	ENSMUST00000135288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026941	Mamdc4	ENSMUST00000142811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026941	Mamdc4	ENSMUST00000152237	ENSMUSP00000119789	TRANSLATION	protein_coding	start/stop	-	5	1130	5	3.96	0	636	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000026941	Mamdc4	ENSMUST00000095117	ENSMUSP00000092735	TRANSLATION	protein_coding	-	CCDS50531.1	5	1232	5	3.96	0.5	676.9	2	3,-2	-	-	17	PRINCIPAL:2
ENSMUSG00000026941	Mamdc4	ENSMUST00000114223	ENSMUSP00000109861	TRANSLATION	protein_coding	-	-	5	1228	5	3.96	0.5	676.9	2	2,-2	-	-	17	ALTERNATIVE:2
ENSMUSG00000027505	Fam209	ENSMUST00000029007	ENSMUSP00000029007	TRANSLATION	protein_coding	-	CCDS50809.1	1	170	0	0	1.5	246.4	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000035226	Rims4	ENSMUST00000044734	ENSMUSP00000045637	TRANSLATION	protein_coding	-	CCDS17018.1	1	269	0	3.8	11.6	56.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039671	Zmynd8	ENSMUST00000150871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000139907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000018050	ENSMUSP00000018050	TRANSLATION	protein_coding	-	-	5	1179	8	10.7	0.5	450.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039671	Zmynd8	ENSMUST00000136842	ENSMUSP00000120631	TRANSLATION	protein_coding	stop	-	3	191	8	2.5	0	31.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000109262	ENSMUSP00000104885	TRANSLATION	protein_coding	-	-	5	472	8	7.25	0	198.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000109266	ENSMUSP00000104889	TRANSLATION	protein_coding	-	CCDS57188.1	1	1199	8	10.7	0.5	450.1	0	-2,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000039671	Zmynd8	ENSMUST00000144530	ENSMUSP00000121363	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000152682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000139202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000124085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039671	Zmynd8	ENSMUST00000170272	ENSMUSP00000128680	TRANSLATION	protein_coding	-	CCDS71194.1	1	1154	8	9.95	0.5	450.1	0	-4,-6	-	-	16.5	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000146204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000150564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000088113	ENSMUSP00000085436	TRANSLATION	protein_coding	-	-	5	1094	8	9.95	0	450.1	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000109269	ENSMUSP00000104892	TRANSLATION	protein_coding	-	CCDS71195.1	1	1235	8	10.7	0.5	450.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039671	Zmynd8	ENSMUST00000099084	ENSMUSP00000096683	TRANSLATION	protein_coding	-	-	5	1206	8	9.95	0.5	450.1	0	-4,-6	-	-	16.5	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000177633	ENSMUSP00000136211	TRANSLATION	protein_coding	-	CCDS57189.1	1	1174	8	9.95	0.5	450.1	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000149369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039671	Zmynd8	ENSMUST00000153655	ENSMUSP00000120932	TRANSLATION	protein_coding	start	-	1	492	8	7.25	0	198.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039671	Zmynd8	ENSMUST00000148674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039671	Zmynd8	ENSMUST00000134557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038567	Cyp24a1	ENSMUST00000038824	ENSMUSP00000047954	TRANSLATION	protein_coding	-	CCDS17122.1	1	514	30	10.75	1.5	357.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000075061	Olfr1272	ENSMUST00000099750	ENSMUSP00000097339	TRANSLATION	protein_coding	-	CCDS16412.1	-	308	0	0.42	3.9	174.9	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075061	Olfr1272	ENSMUST00000117141	ENSMUSP00000150745	TRANSLATION	protein_coding	-	CCDS16412.1	5	308	0	0.42	3.9	174.9	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000040687	Madd	ENSMUST00000111371	ENSMUSP00000107002	TRANSLATION	protein_coding	-	-	2	1574	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000150461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000150517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000066473	ENSMUSP00000069350	TRANSLATION	protein_coding	-	CCDS50635.1	5	1627	0	1.665	1.7	182.8	1	-4,-7	-	-	12.292	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000135715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000125321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000099723	ENSMUSP00000097311	TRANSLATION	protein_coding	-	CCDS50638.1	1	1577	0	1.665	2.9	182.8	1	-4,-7	-	-	12.792	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000111373	ENSMUSP00000107004	TRANSLATION	protein_coding	-	-	5	1541	0	1.665	2.9	182.8	1	-4,-7	-	-	12.792	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000125227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000111375	ENSMUSP00000107006	TRANSLATION	protein_coding	-	-	5	1562	0	1.665	2.9	182.8	1	-4,-7	-	-	12.792	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000075269	ENSMUSP00000074746	TRANSLATION	protein_coding	-	-	2	1554	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000111376	ENSMUSP00000107007	TRANSLATION	protein_coding	-	-	5	1602	0	1.665	3.4	182.8	1	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000156368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000154028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000130591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000153688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040687	Madd	ENSMUST00000077941	ENSMUSP00000077094	TRANSLATION	protein_coding	-	-	2	1632	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000111372	ENSMUSP00000107003	TRANSLATION	protein_coding	-	-	2	1573	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000140600	ENSMUSP00000117657	TRANSLATION	protein_coding	start/stop	-	5	263	0	0.675	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040687	Madd	ENSMUST00000111369	ENSMUSP00000107000	TRANSLATION	protein_coding	-	-	5	1475	0	1.665	2.9	182.8	1	-4,-7	-	-	12.792	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000146097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000132791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000111381	ENSMUSP00000107012	TRANSLATION	protein_coding	-	-	2	1593	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000066420	ENSMUSP00000067210	TRANSLATION	protein_coding	-	-	5	1115	0	1.665	0	182.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000135910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000130395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040687	Madd	ENSMUST00000099725	ENSMUSP00000097313	TRANSLATION	protein_coding	-	CCDS50635.1	5	1627	0	1.665	1.7	182.8	1	-4,-7	-	-	12.292	ALTERNATIVE:2
ENSMUSG00000040687	Madd	ENSMUST00000111370	ENSMUSP00000107001	TRANSLATION	protein_coding	-	CCDS38178.1	1	1558	0	1.665	2.9	182.8	1	-4,-7	-	-	12.792	PRINCIPAL:3
ENSMUSG00000078905	Gm14393	ENSMUST00000072895	ENSMUSP00000072668	TRANSLATION	protein_coding	-	CCDS50818.1	2	187	15	2.45	0.5	146.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078905	Gm14393	ENSMUST00000109066	ENSMUSP00000104694	TRANSLATION	protein_coding	-	-	2	64	0	1.45	1.5	80.1	0	-4,-5	-	-	5.568	MINOR
ENSMUSG00000055943	Emc7	ENSMUST00000069747	ENSMUSP00000068610	TRANSLATION	protein_coding	-	CCDS16555.1	1	241	0	0	6.3	116.4	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000027384	Ndufaf5	ENSMUST00000123078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027384	Ndufaf5	ENSMUST00000125913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027384	Ndufaf5	ENSMUST00000044825	ENSMUSP00000035325	TRANSLATION	protein_coding	-	CCDS16804.2	1	343	18	2.92	1.5	70	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000003604	Aven	ENSMUST00000099588	ENSMUSP00000097184	TRANSLATION	protein_coding	-	CCDS50660.1	3	217	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000003604	Aven	ENSMUST00000003705	ENSMUSP00000003705	TRANSLATION	protein_coding	-	CCDS16557.1	1	342	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000003604	Aven	ENSMUST00000127894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074679	Defb28	ENSMUST00000121912	ENSMUSP00000112697	TRANSLATION	protein_coding	-	CCDS50751.1	1	89	0	0	1.5	27.1	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074521	Gm14327	ENSMUST00000099001	ENSMUSP00000096599	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074521	Gm14327	ENSMUST00000108935	ENSMUSP00000104563	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	74.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000085484	Gm13539	ENSMUST00000153913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085484	Gm13539	ENSMUST00000211245	ENSMUSP00000147998	TRANSLATION	protein_coding	-	-	5	183	0	2.426	0	31.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000075153	Olfr1135	ENSMUST00000099853	ENSMUSP00000097439	TRANSLATION	protein_coding	-	CCDS16302.1	-	310	0	0.2	7.5	150	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075153	Olfr1135	ENSMUST00000213835	ENSMUSP00000150079	TRANSLATION	protein_coding	-	CCDS16302.1	5	310	0	0.2	7.5	150	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048058	Ldlrad3	ENSMUST00000058790	ENSMUSP00000054134	TRANSLATION	protein_coding	-	CCDS38187.1	1	345	15	3.1	6.3	129.6	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000048058	Ldlrad3	ENSMUST00000127888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048058	Ldlrad3	ENSMUST00000111222	ENSMUSP00000106853	TRANSLATION	protein_coding	-	-	5	313	10	2.1	1.5	82.2	0	3,-2	-	-	10.01	MINOR
ENSMUSG00000045392	Olfr1033	ENSMUST00000215682	ENSMUSP00000148948	TRANSLATION	protein_coding	-	CCDS16234.1	1	310	0	0.76	6.3	170	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045392	Olfr1033	ENSMUST00000213865	ENSMUSP00000149202	TRANSLATION	protein_coding	-	CCDS16234.1	5	310	0	0.76	6.3	170	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045392	Olfr1033	ENSMUST00000218397	ENSMUSP00000151539	TRANSLATION	protein_coding	-	CCDS16234.1	5	310	0	0.76	6.3	170	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045392	Olfr1033	ENSMUST00000214546	ENSMUSP00000149818	TRANSLATION	protein_coding	-	CCDS16234.1	1	310	0	0.76	6.3	170	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045392	Olfr1033	ENSMUST00000213774	ENSMUSP00000150625	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000009207	Lnpk	ENSMUST00000155006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000102676	ENSMUSP00000099737	TRANSLATION	protein_coding	-	CCDS50609.1	1	376	4	0	1.5	74.5	4	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000009207	Lnpk	ENSMUST00000064503	ENSMUSP00000066891	TRANSLATION	protein_coding	-	CCDS16137.1	1	425	4	0	1.5	74.5	4	-4,-7	-	-	10	PRINCIPAL:3
ENSMUSG00000009207	Lnpk	ENSMUST00000145933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000127168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000154706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000130232	ENSMUSP00000120494	TRANSLATION	protein_coding	stop	-	5	196	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000009207	Lnpk	ENSMUST00000134168	ENSMUSP00000123058	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009207	Lnpk	ENSMUST00000134764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000130586	ENSMUSP00000122488	TRANSLATION	protein_coding	stop	-	5	254	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000009207	Lnpk	ENSMUST00000134641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000145293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009207	Lnpk	ENSMUST00000111993	ENSMUSP00000107624	TRANSLATION	protein_coding	-	CCDS50609.1	1	376	4	0	1.5	74.5	4	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000026959	Grin1	ENSMUST00000114318	ENSMUSP00000109957	TRANSLATION	protein_coding	-	-	5	943	12	18.85	13	410.2	7	3,-2	-	-	21.222	ALTERNATIVE:1
ENSMUSG00000026959	Grin1	ENSMUST00000028335	ENSMUSP00000028335	TRANSLATION	protein_coding	-	CCDS15764.1	1	938	12	17.95	6.3	417.1	7	3,-2	-	-	17.808	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000114312	ENSMUSP00000109951	TRANSLATION	protein_coding	-	CCDS50528.1	1	885	12	17.9	13	417.1	7	3,-2	-	-	19.734	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000153465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000155627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000114314	ENSMUSP00000109953	TRANSLATION	protein_coding	-	-	5	922	12	18.1	14.2	417.1	7	3,-2	-	-	20.5	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000135426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000114307	ENSMUSP00000109946	TRANSLATION	protein_coding	-	-	5	901	12	17.75	5.1	417.1	7	3,-2	-	-	17.042	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000144402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000114310	ENSMUSP00000109949	TRANSLATION	protein_coding	-	-	5	959	12	18.7	6.3	410.2	7	3,-2	-	-	18.894	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000114308	ENSMUSP00000109947	TRANSLATION	protein_coding	-	-	5	922	12	18.5	5.1	410.2	7	3,-2	-	-	18.128	MINOR
ENSMUSG00000026959	Grin1	ENSMUST00000127171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000153551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026959	Grin1	ENSMUST00000114317	ENSMUSP00000109956	TRANSLATION	protein_coding	-	CCDS50529.1	1	906	12	18.65	13	410.2	7	3,-2	-	-	20.82	PRINCIPAL:2
ENSMUSG00000033268	Duox1	ENSMUST00000099461	ENSMUSP00000097060	TRANSLATION	protein_coding	-	CCDS38222.1	2	1551	6	10.01	3.9	588.7	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000027443	Cst12	ENSMUST00000168443	ENSMUSP00000126008	TRANSLATION	protein_coding	-	CCDS50737.1	1	141	0	1.8	0.5	33.3	0	-3,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027443	Cst12	ENSMUST00000028932	ENSMUSP00000028932	TRANSLATION	protein_coding	-	-	1	128	0	1.8	1	33.3	0	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000027498	Cstf1	ENSMUST00000151511	ENSMUSP00000121178	TRANSLATION	protein_coding	stop	-	2	155	0	1.4	0	94.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027498	Cstf1	ENSMUST00000116375	ENSMUSP00000112076	TRANSLATION	protein_coding	-	CCDS17130.1	1	431	0	3.65	15.5	179	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000057133	Chd6	ENSMUST00000137152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057133	Chd6	ENSMUST00000143081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057133	Chd6	ENSMUST00000125179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057133	Chd6	ENSMUST00000155918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057133	Chd6	ENSMUST00000130265	ENSMUSP00000117075	TRANSLATION	protein_coding	start	-	5	217	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057133	Chd6	ENSMUST00000039782	ENSMUSP00000042291	TRANSLATION	protein_coding	-	CCDS17000.1	1	2711	7	10.03	1.5	368.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000057133	Chd6	ENSMUST00000155066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057133	Chd6	ENSMUST00000138078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057133	Chd6	ENSMUST00000149866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057133	Chd6	ENSMUST00000137831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057133	Chd6	ENSMUST00000134178	ENSMUSP00000123240	TRANSLATION	protein_coding	stop	-	2	1183	7	10.03	0	368.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044487	Olfr1112	ENSMUST00000216772	ENSMUSP00000149960	TRANSLATION	protein_coding	-	CCDS16284.1	5	318	0	0.42	0.5	174.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044487	Olfr1112	ENSMUST00000053050	ENSMUSP00000052341	TRANSLATION	protein_coding	-	CCDS16284.1	-	318	0	0.42	0.5	174.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079005	Gm14147	ENSMUST00000109888	ENSMUSP00000105514	TRANSLATION	protein_coding	-	-	5	640	18	0.6	0.5	229.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079005	Gm14147	ENSMUST00000178211	ENSMUSP00000137552	TRANSLATION	protein_coding	-	-	5	640	18	0.6	0.5	229.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078889	Gm14288	ENSMUST00000123863	ENSMUSP00000121303	TRANSLATION	protein_coding	-	-	2	88	0	1.45	0	72.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000078889	Gm14288	ENSMUST00000109020	ENSMUSP00000104648	TRANSLATION	protein_coding	-	CCDS50822.1	1	64	0	1.45	1.5	72.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000056486	Chn1	ENSMUST00000102677	ENSMUSP00000099738	TRANSLATION	protein_coding	-	CCDS16133.1	1	334	8	6.91	3.9	231.6	0	-4,-7	-	-	9.942	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000139252	ENSMUSP00000123312	TRANSLATION	nonsense_mediated_decay	-	-	3	87	0	2.396	0	36	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000112024	ENSMUSP00000107655	TRANSLATION	protein_coding	-	CCDS50608.1	1	459	8	10.306	10.8	280.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056486	Chn1	ENSMUST00000136953	ENSMUSP00000123551	TRANSLATION	protein_coding	stop	-	3	81	5	2.16	0	59.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000229312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056486	Chn1	ENSMUST00000229987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056486	Chn1	ENSMUST00000180045	ENSMUSP00000137106	TRANSLATION	protein_coding	-	CCDS38145.1	1	210	1	4.83	0.5	173.1	0	-4,-5	-	-	0.75	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000229731	ENSMUSP00000155037	TRANSLATION	protein_coding	-	CCDS38145.1	-	210	1	4.83	0.5	173.1	0	-4,-5	-	-	0.75	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000166199	ENSMUSP00000128847	TRANSLATION	protein_coding	-	CCDS50607.1	1	401	3	8.976	0.5	229.8	0	-4,-5	-	-	8.538	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000135904	ENSMUSP00000115029	TRANSLATION	protein_coding	stop	-	2	128	0	2	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000230959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056486	Chn1	ENSMUST00000124450	ENSMUSP00000116708	TRANSLATION	nonsense_mediated_decay	start	-	3	29	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000154258	ENSMUSP00000116417	TRANSLATION	protein_coding	stop	-	5	95	5	2.66	0	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000070579	ENSMUSP00000070301	TRANSLATION	protein_coding	-	CCDS38145.1	1	210	1	4.83	0.5	173.1	0	-4,-5	-	-	0.75	MINOR
ENSMUSG00000056486	Chn1	ENSMUST00000231013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015776	Med22	ENSMUST00000015920	ENSMUSP00000015920	TRANSLATION	protein_coding	-	CCDS15813.1	2	200	0	0	12.8	128.6	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000015776	Med22	ENSMUST00000139815	ENSMUSP00000116442	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	111.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015776	Med22	ENSMUST00000102899	ENSMUSP00000099963	TRANSLATION	protein_coding	-	CCDS15814.1	1	140	0	0	9.5	128.6	0	-4,-7	-	-	8.88	MINOR
ENSMUSG00000074582	Arfgef2	ENSMUST00000099078	ENSMUSP00000096677	TRANSLATION	protein_coding	-	CCDS38335.1	1	1792	0	9.361	1.5	653.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000074582	Arfgef2	ENSMUST00000144847	ENSMUSP00000131572	TRANSLATION	protein_coding	start/stop	-	5	283	0	2.34	0	89.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000112159	ENSMUSP00000107785	TRANSLATION	protein_coding	-	CCDS50602.1	1	286	0	0	1.7	321.1	0	-4,0	-	-	0.342	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000132619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041966	Dcaf17	ENSMUST00000064141	ENSMUSP00000065624	TRANSLATION	protein_coding	-	CCDS50601.1	1	519	0	0	5.1	735.5	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000041966	Dcaf17	ENSMUST00000112167	ENSMUSP00000107791	TRANSLATION	nonsense_mediated_decay	-	-	5	156	0	0	0	190.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000135357	ENSMUSP00000118011	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	219.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000154704	ENSMUSP00000120016	TRANSLATION	protein_coding	-	CCDS50601.1	1	519	0	0	5.1	735.5	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000041966	Dcaf17	ENSMUST00000130292	ENSMUSP00000117830	TRANSLATION	protein_coding	start/stop	-	1	405	0	0	0	541.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000136299	ENSMUSP00000114459	TRANSLATION	nonsense_mediated_decay	start	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041966	Dcaf17	ENSMUST00000102701	ENSMUSP00000099762	TRANSLATION	protein_coding	-	CCDS16111.1	1	505	0	0	1.5	677.9	0	-4,0	-	-	2.788	MINOR
ENSMUSG00000017003	Svs3a	ENSMUST00000017147	ENSMUSP00000017147	TRANSLATION	protein_coding	-	CCDS17030.1	1	265	0	0	1.5	25.5	0	3,-2	-	-	5.31	PRINCIPAL:3
ENSMUSG00000017003	Svs3a	ENSMUST00000109370	ENSMUSP00000104995	TRANSLATION	protein_coding	-	CCDS79860.1	1	264	0	0	1.5	28.8	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000026999	Nup35	ENSMUST00000127926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026999	Nup35	ENSMUST00000135305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026999	Nup35	ENSMUST00000144697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026999	Nup35	ENSMUST00000124377	ENSMUSP00000122132	TRANSLATION	protein_coding	stop	-	3	197	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026999	Nup35	ENSMUST00000028382	ENSMUSP00000028382	TRANSLATION	protein_coding	-	CCDS16179.1	1	325	0	3.6	6.3	92.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039059	Hrh3	ENSMUST00000164442	ENSMUSP00000130553	TRANSLATION	protein_coding	-	-	5	413	0	4.74	1	212	20	-3,-6	-	-	11.142	ALTERNATIVE:2
ENSMUSG00000039059	Hrh3	ENSMUST00000056480	ENSMUSP00000049963	TRANSLATION	protein_coding	-	CCDS17169.1	1	445	0	5.14	1.5	211.8	20	-3,-6	-	-	11.928	PRINCIPAL:2
ENSMUSG00000039059	Hrh3	ENSMUST00000166724	ENSMUSP00000126336	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0.95	0	31.3	6	-3,-6	-	-	-1	MINOR
ENSMUSG00000039059	Hrh3	ENSMUST00000166392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039059	Hrh3	ENSMUST00000171736	ENSMUSP00000127085	TRANSLATION	protein_coding	-	-	5	301	0	3.15	0	145.5	16	-3,-6	-	-	3.972	MINOR
ENSMUSG00000039059	Hrh3	ENSMUST00000163215	ENSMUSP00000127053	TRANSLATION	protein_coding	-	-	5	466	0	3.54	0	184.4	19	-3,-6	-	-	7.086	MINOR
ENSMUSG00000039059	Hrh3	ENSMUST00000165762	ENSMUSP00000132203	TRANSLATION	protein_coding	-	-	5	455	0	5.17	0	211.8	20	-3,-6	-	-	11.988	ALTERNATIVE:2
ENSMUSG00000039059	Hrh3	ENSMUST00000165248	ENSMUSP00000130181	TRANSLATION	protein_coding	-	-	5	407	0	4.53	0	211.7	20	-3,-6	-	-	10.704	MINOR
ENSMUSG00000037025	Foxa2	ENSMUST00000109964	ENSMUSP00000105590	TRANSLATION	protein_coding	-	CCDS71157.1	1	465	0	2.2	5.1	301.8	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000037025	Foxa2	ENSMUST00000146242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037025	Foxa2	ENSMUST00000047315	ENSMUSP00000045918	TRANSLATION	protein_coding	-	CCDS16836.1	1	459	0	2.2	5.1	301.8	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000037025	Foxa2	ENSMUST00000172928	ENSMUSP00000134081	TRANSLATION	protein_coding	stop	-	5	275	0	1.6	0	149.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062124	Defb45	ENSMUST00000131096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062124	Defb45	ENSMUST00000109834	ENSMUSP00000105460	TRANSLATION	protein_coding	-	CCDS38278.1	1	66	0	0	1.5	35.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000040549	Ckap5	ENSMUST00000123253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040549	Ckap5	ENSMUST00000139433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040549	Ckap5	ENSMUST00000147809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040549	Ckap5	ENSMUST00000099716	ENSMUSP00000097303	TRANSLATION	protein_coding	-	CCDS50640.1	1	2032	0	21.74	7.5	93.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040549	Ckap5	ENSMUST00000111338	ENSMUSP00000106970	TRANSLATION	protein_coding	-	CCDS50640.1	1	2032	0	21.74	7.5	93.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040549	Ckap5	ENSMUST00000133633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040549	Ckap5	ENSMUST00000046769	ENSMUSP00000046263	TRANSLATION	protein_coding	-	CCDS16433.1	1	2011	0	21.74	2.9	93.1	0	-4,-5	-	-	12.876	MINOR
ENSMUSG00000040549	Ckap5	ENSMUST00000111337	ENSMUSP00000106969	TRANSLATION	protein_coding	-	-	5	1972	0	21.74	1.2	93.1	0	-4,-5	-	-	12.093	MINOR
ENSMUSG00000040549	Ckap5	ENSMUST00000129118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099820	Olfr1036	ENSMUST00000164985	ENSMUSP00000130843	TRANSLATION	protein_coding	-	CCDS16236.1	-	310	0	0.2	7.6	173.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000078949	R3hdml	ENSMUST00000109416	ENSMUSP00000105043	TRANSLATION	protein_coding	-	CCDS38316.1	5	253	2	2.74	1.5	89.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000039145	Camk1d	ENSMUST00000044009	ENSMUSP00000037028	TRANSLATION	protein_coding	-	CCDS15665.1	1	385	18	9	7.5	270.2	0	-4,-5	-	-	20.334	PRINCIPAL:1
ENSMUSG00000039145	Camk1d	ENSMUST00000114987	ENSMUSP00000110638	TRANSLATION	protein_coding	-	CCDS70975.1	1	377	19	8.36	0.5	260.8	0	-4,-7	-	-	16.158	MINOR
ENSMUSG00000039145	Camk1d	ENSMUST00000130470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039145	Camk1d	ENSMUST00000155927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000150301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000123890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000112251	ENSMUSP00000107870	TRANSLATION	protein_coding	-	-	5	1892	15	0.2	0.5	68.1	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000044308	Ubr3	ENSMUST00000131553	ENSMUSP00000121401	TRANSLATION	protein_coding	start	-	2	517	11	0.2	0	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044308	Ubr3	ENSMUST00000142563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000055758	ENSMUSP00000060159	TRANSLATION	protein_coding	-	CCDS16104.2	1	1889	15	0.2	0.5	68.1	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000044308	Ubr3	ENSMUST00000152610	ENSMUSP00000122027	TRANSLATION	protein_coding	start/stop	-	3	242	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044308	Ubr3	ENSMUST00000125608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000136543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044308	Ubr3	ENSMUST00000126165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078886	Gm2026	ENSMUST00000174416	ENSMUSP00000134428	TRANSLATION	protein_coding	-	-	3	114	3	1.45	0	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078886	Gm2026	ENSMUST00000109008	ENSMUSP00000104636	TRANSLATION	protein_coding	-	CCDS50826.1	5	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078886	Gm2026	ENSMUST00000109007	ENSMUSP00000104635	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000051730	Mettl5	ENSMUST00000142127	ENSMUSP00000121474	TRANSLATION	nonsense_mediated_decay	-	-	1	142	17	2.56	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051730	Mettl5	ENSMUST00000135459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051730	Mettl5	ENSMUST00000060447	ENSMUSP00000050907	TRANSLATION	protein_coding	-	CCDS16103.2	2	209	17	4.15	9.6	44	0	-4,-5	-	-	20.946	PRINCIPAL:1
ENSMUSG00000051730	Mettl5	ENSMUST00000135487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039463	Slc9a8	ENSMUST00000155585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000139673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000149607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000109218	ENSMUSP00000104841	TRANSLATION	protein_coding	-	CCDS84586.1	1	545	0	3.4	0.5	214	13	-4,-6	-	-	11.322	MINOR
ENSMUSG00000039463	Slc9a8	ENSMUST00000141400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000148454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000135353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039463	Slc9a8	ENSMUST00000150326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039463	Slc9a8	ENSMUST00000047815	ENSMUSP00000044185	TRANSLATION	protein_coding	-	CCDS38339.1	1	576	0	3.4	6.9	225.3	13	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039463	Slc9a8	ENSMUST00000125855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039463	Slc9a8	ENSMUST00000124139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039463	Slc9a8	ENSMUST00000073873	ENSMUSP00000073536	TRANSLATION	protein_coding	-	-	5	549	0	3.4	0.5	217.4	13	-4,-6	-	-	11.526	MINOR
ENSMUSG00000039463	Slc9a8	ENSMUST00000131956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036617	Etl4	ENSMUST00000114627	ENSMUSP00000110274	TRANSLATION	protein_coding	-	CCDS38053.1	5	1997	0	0	0.5	0	0	-3,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000036617	Etl4	ENSMUST00000114607	ENSMUSP00000110254	TRANSLATION	protein_coding	-	-	5	934	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000131714	ENSMUSP00000116637	TRANSLATION	protein_coding	stop	-	5	173	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036617	Etl4	ENSMUST00000146488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036617	Etl4	ENSMUST00000123383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036617	Etl4	ENSMUST00000146881	ENSMUSP00000119778	TRANSLATION	protein_coding	stop	-	2	220	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036617	Etl4	ENSMUST00000066509	ENSMUSP00000066170	TRANSLATION	protein_coding	-	-	5	1946	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000125556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036617	Etl4	ENSMUST00000136870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036617	Etl4	ENSMUST00000114606	ENSMUSP00000110253	TRANSLATION	protein_coding	-	-	5	908	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000114614	ENSMUSP00000110261	TRANSLATION	protein_coding	-	CCDS50510.1	1	1341	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000146613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036617	Etl4	ENSMUST00000114604	ENSMUSP00000110251	TRANSLATION	protein_coding	-	CCDS50509.1	1	1347	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000114608	ENSMUSP00000110255	TRANSLATION	protein_coding	-	-	5	1629	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000045555	ENSMUSP00000041431	TRANSLATION	protein_coding	-	CCDS50511.1	1	1352	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000125772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036617	Etl4	ENSMUST00000114610	ENSMUSP00000110257	TRANSLATION	protein_coding	-	-	1	480	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036617	Etl4	ENSMUST00000238889	ENSMUSP00000159127	TRANSLATION	protein_coding	stop	-	-	277	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036617	Etl4	ENSMUST00000129278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036617	Etl4	ENSMUST00000156587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036617	Etl4	ENSMUST00000139531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000144823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000131285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000102751	ENSMUSP00000099812	TRANSLATION	protein_coding	-	CCDS50589.1	1	423	0	5.77	0.5	280.8	0	-4,-5	-	-	6.462	MINOR
ENSMUSG00000026988	Wdsub1	ENSMUST00000128671	ENSMUSP00000121242	TRANSLATION	protein_coding	stop	-	5	194	0	1.78	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026988	Wdsub1	ENSMUST00000140475	ENSMUSP00000114811	TRANSLATION	protein_coding	stop	-	2	194	0	1.78	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026988	Wdsub1	ENSMUST00000144343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000138519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000140852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026988	Wdsub1	ENSMUST00000133809	ENSMUSP00000114814	TRANSLATION	protein_coding	start	-	3	183	0	2.7	0	52.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026988	Wdsub1	ENSMUST00000028368	ENSMUSP00000028368	TRANSLATION	protein_coding	-	CCDS16055.1	1	474	0	6.57	1.5	346.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026988	Wdsub1	ENSMUST00000139689	ENSMUSP00000121438	TRANSLATION	protein_coding	start/stop	-	3	241	0	4.31	0	126.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026988	Wdsub1	ENSMUST00000127004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075151	Olfr1136	ENSMUST00000077471	ENSMUSP00000076681	TRANSLATION	protein_coding	-	CCDS16303.1	-	310	0	0	1.5	140.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000144717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000142128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000148924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000145851	ENSMUSP00000118946	TRANSLATION	protein_coding	start/stop	-	3	247	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000139684	ENSMUSP00000117915	TRANSLATION	nonsense_mediated_decay	start	-	3	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000120316	ENSMUSP00000112540	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000138990	ENSMUSP00000120742	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000133132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000119422	ENSMUSP00000113481	TRANSLATION	protein_coding	-	CCDS79848.1	1	1048	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000151673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000144014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000138758	ENSMUSP00000120811	TRANSLATION	protein_coding	start/stop	-	3	212	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000110243	ENSMUSP00000105872	TRANSLATION	protein_coding	-	-	1	265	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000146975	ENSMUSP00000119346	TRANSLATION	protein_coding	stop	-	5	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000148932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000123049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027309	4930402H24Rik	ENSMUST00000044766	ENSMUSP00000046992	TRANSLATION	protein_coding	-	CCDS16750.1	1	1179	0	0	3.9	0	0	-4,-7	-	-	1	PRINCIPAL:3
ENSMUSG00000027082	Tfpi	ENSMUST00000090732	ENSMUSP00000088235	TRANSLATION	protein_coding	-	CCDS50620.1	1	235	0	2.492	0.5	135.1	0	1,-3	-	-	5.742	MINOR
ENSMUSG00000027082	Tfpi	ENSMUST00000150261	ENSMUSP00000122776	TRANSLATION	protein_coding	start	-	1	246	0	2.492	0	135.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000027082	Tfpi	ENSMUST00000125677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027082	Tfpi	ENSMUST00000111718	ENSMUSP00000107347	TRANSLATION	protein_coding	-	CCDS16185.1	5	306	0	3.672	0.5	200.1	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000027082	Tfpi	ENSMUST00000144775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027082	Tfpi	ENSMUST00000028487	ENSMUSP00000028487	TRANSLATION	protein_coding	-	CCDS16185.1	1	306	0	3.672	0.5	200.1	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000027082	Tfpi	ENSMUST00000111714	ENSMUSP00000107343	TRANSLATION	protein_coding	-	CCDS50620.1	1	235	0	2.492	0.5	135.1	0	1,-3	-	-	5.742	MINOR
ENSMUSG00000027082	Tfpi	ENSMUST00000111711	ENSMUSP00000107340	TRANSLATION	protein_coding	-	-	5	247	0	2.36	1	135.1	0	1,-3	-	-	5.478	MINOR
ENSMUSG00000027082	Tfpi	ENSMUST00000111722	ENSMUSP00000107351	TRANSLATION	protein_coding	-	-	5	300	0	3.54	0	200.1	0	1,-3	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000027082	Tfpi	ENSMUST00000111717	ENSMUSP00000107346	TRANSLATION	protein_coding	-	CCDS50620.1	5	235	0	2.492	0.5	135.1	0	1,-3	-	-	5.742	MINOR
ENSMUSG00000043892	Olfr1018	ENSMUST00000054201	ENSMUSP00000050833	TRANSLATION	protein_coding	-	CCDS16222.1	-	311	0	0.36	5.1	196.8	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043892	Olfr1018	ENSMUST00000214416	ENSMUSP00000151090	TRANSLATION	protein_coding	-	CCDS16222.1	5	311	0	0.36	5.1	196.8	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042448	Hoxd1	ENSMUST00000047793	ENSMUSP00000043078	TRANSLATION	protein_coding	-	CCDS16147.1	1	328	0	1	1.5	72.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054160	Nkx2-4	ENSMUST00000067020	ENSMUSP00000066690	TRANSLATION	protein_coding	-	CCDS16833.1	1	354	0	0.8	0.5	71.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005802	Slc30a4	ENSMUST00000005952	ENSMUSP00000005952	TRANSLATION	protein_coding	-	CCDS16667.1	1	430	0	0	5.1	181	7	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000005802	Slc30a4	ENSMUST00000099457	ENSMUSP00000097056	TRANSLATION	protein_coding	-	CCDS71131.1	1	381	0	0	1.7	92.9	5	-4,-6	-	-	1.056	MINOR
ENSMUSG00000075214	Olfr1002	ENSMUST00000099920	ENSMUSP00000097504	TRANSLATION	protein_coding	-	CCDS16212.1	-	318	0	0	1.5	165.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075214	Olfr1002	ENSMUST00000215548	ENSMUSP00000150405	TRANSLATION	protein_coding	-	CCDS16212.1	5	318	0	0	1.5	165.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027122	Arl14ep	ENSMUST00000093883	ENSMUSP00000091409	TRANSLATION	protein_coding	-	CCDS16503.1	1	276	2	0	1.5	124.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027122	Arl14ep	ENSMUST00000146961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027122	Arl14ep	ENSMUST00000124598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027122	Arl14ep	ENSMUST00000028536	ENSMUSP00000028536	TRANSLATION	protein_coding	-	CCDS16503.1	1	276	2	0	1.5	124.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000035168	Tanc1	ENSMUST00000056900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035168	Tanc1	ENSMUST00000142573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035168	Tanc1	ENSMUST00000136248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035168	Tanc1	ENSMUST00000126271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035168	Tanc1	ENSMUST00000128030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035168	Tanc1	ENSMUST00000037526	ENSMUSP00000036003	TRANSLATION	protein_coding	-	CCDS16054.1	5	1856	0	5.8	1.5	140.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035168	Tanc1	ENSMUST00000112568	ENSMUSP00000108187	TRANSLATION	protein_coding	-	CCDS71057.1	5	1849	0	5.8	1.5	140.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035168	Tanc1	ENSMUST00000127013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035168	Tanc1	ENSMUST00000139863	ENSMUSP00000123345	TRANSLATION	protein_coding	-	CCDS16054.1	1	1856	0	5.8	1.5	140.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035168	Tanc1	ENSMUST00000147650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035168	Tanc1	ENSMUST00000162857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005881	Ergic3	ENSMUST00000150970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005881	Ergic3	ENSMUST00000144707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005881	Ergic3	ENSMUST00000142859	ENSMUSP00000115912	TRANSLATION	protein_coding	start/stop	-	5	246	0	2.2362	0	226.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005881	Ergic3	ENSMUST00000137545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005881	Ergic3	ENSMUST00000088650	ENSMUSP00000086025	TRANSLATION	protein_coding	-	-	1	394	0	2.5012	0	412.7	2	-4,-6	-	-	11.004	MINOR
ENSMUSG00000005881	Ergic3	ENSMUST00000149381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005881	Ergic3	ENSMUST00000155370	ENSMUSP00000119051	TRANSLATION	protein_coding	start	-	3	235	0	2.6662	0	307	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005881	Ergic3	ENSMUST00000152568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005881	Ergic3	ENSMUST00000130793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005881	Ergic3	ENSMUST00000006035	ENSMUSP00000006035	TRANSLATION	protein_coding	-	CCDS16959.1	1	383	0	2.6662	19.5	423.1	2	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000001815	Evx2	ENSMUST00000173623	ENSMUSP00000134131	TRANSLATION	protein_coding	-	CCDS16138.1	1	475	0	1	0.5	73.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000001815	Evx2	ENSMUST00000001867	ENSMUSP00000001867	TRANSLATION	protein_coding	-	-	1	474	0	1	0.5	73.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000016346	Kcnq2	ENSMUST00000103047	ENSMUSP00000099336	TRANSLATION	protein_coding	-	CCDS17195.1	1	747	0	7.37	0.5	501.8	13	-4,-5	-	-	6	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000140789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000081528	ENSMUSP00000080243	TRANSLATION	protein_coding	-	CCDS17197.1	1	570	0	6.67	0.5	314.1	13	-4,-5	-	-	4.602	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000103049	ENSMUSP00000099338	TRANSLATION	protein_coding	start	-	1	795	0	7.17	0	675.1	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000049792	ENSMUSP00000052453	TRANSLATION	protein_coding	-	CCDS17194.1	1	754	0	6.67	0.5	476.9	13	-4,-5	-	-	4.602	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000197599	ENSMUSP00000143490	TRANSLATION	protein_coding	start/stop	-	5	285	0	4.6	0	236.3	8	-1,-4	-	-	-1	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000152099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016346	Kcnq2	ENSMUST00000145861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000129695	ENSMUSP00000123488	TRANSLATION	protein_coding	start	-	1	726	0	6.77	0	674.5	11	-4,-7	-	-	-1	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000129361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000103048	ENSMUSP00000099337	TRANSLATION	protein_coding	-	CCDS17196.1	1	723	0	7.17	0.5	494.3	13	-4,-5	-	-	5.598	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000197015	ENSMUSP00000143263	TRANSLATION	protein_coding	-	-	5	842	0	7.17	3.9	679.5	13	-4,-5	-	-	12.598	ALTERNATIVE:2
ENSMUSG00000016346	Kcnq2	ENSMUST00000144592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000016491	ENSMUSP00000016491	TRANSLATION	protein_coding	-	CCDS17193.1	1	759	0	7.37	0.5	501.8	13	-4,-5	-	-	6	MINOR
ENSMUSG00000016346	Kcnq2	ENSMUST00000154164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016346	Kcnq2	ENSMUST00000103050	ENSMUSP00000099339	TRANSLATION	protein_coding	-	-	5	839	0	7.17	3.9	675.1	13	-4,-5	-	-	12.334	ALTERNATIVE:2
ENSMUSG00000016346	Kcnq2	ENSMUST00000129073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000123336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000149964	ENSMUSP00000122915	TRANSLATION	protein_coding	-	CCDS17198.1	1	870	0	7.17	3.9	679.5	13	-4,-5	-	-	12.598	PRINCIPAL:2
ENSMUSG00000016346	Kcnq2	ENSMUST00000139458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016346	Kcnq2	ENSMUST00000103051	ENSMUSP00000099340	TRANSLATION	protein_coding	-	-	5	852	0	7.17	3.9	679.5	13	-4,-5	-	-	12.598	ALTERNATIVE:2
ENSMUSG00000038848	Ythdf1	ENSMUST00000108876	ENSMUSP00000104504	TRANSLATION	protein_coding	-	-	1	586	0	1.33	0	144.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000038848	Ythdf1	ENSMUST00000124666	ENSMUSP00000116665	TRANSLATION	protein_coding	stop	-	3	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038848	Ythdf1	ENSMUST00000037299	ENSMUSP00000037808	TRANSLATION	protein_coding	-	CCDS17188.1	1	559	0	1.33	6.3	144.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026821	Ralgds	ENSMUST00000137513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026821	Ralgds	ENSMUST00000140704	ENSMUSP00000118966	TRANSLATION	protein_coding	start	-	3	152	0	3.25	0	61.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026821	Ralgds	ENSMUST00000128680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026821	Ralgds	ENSMUST00000146217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026821	Ralgds	ENSMUST00000135803	ENSMUSP00000115092	TRANSLATION	protein_coding	stop	-	3	127	0	1.1	0	60.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026821	Ralgds	ENSMUST00000137215	ENSMUSP00000116215	TRANSLATION	nonsense_mediated_decay	start	-	3	116	0	1.15	0	62.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026821	Ralgds	ENSMUST00000238699	ENSMUSP00000158697	TRANSLATION	protein_coding	-	-	-	869	0	8.4	0	310.9	0	-3,-1	-	-	7.782	MINOR
ENSMUSG00000026821	Ralgds	ENSMUST00000130281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026821	Ralgds	ENSMUST00000113893	ENSMUSP00000109526	TRANSLATION	protein_coding	-	CCDS50548.1	1	895	0	9.9	1.5	328.1	0	-4,-7	-	-	11.814	ALTERNATIVE:2
ENSMUSG00000026821	Ralgds	ENSMUST00000100241	ENSMUSP00000097812	TRANSLATION	protein_coding	-	CCDS50547.1	1	907	0	9.9	1.5	331.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000026821	Ralgds	ENSMUST00000028170	ENSMUSP00000028170	TRANSLATION	protein_coding	-	CCDS15840.1	1	852	0	9.9	1.5	331.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027134	Lpcat4	ENSMUST00000129503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027134	Lpcat4	ENSMUST00000132314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027134	Lpcat4	ENSMUST00000028554	ENSMUSP00000028554	TRANSLATION	protein_coding	-	CCDS16548.1	1	524	0	0	6.4	54.8	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000027134	Lpcat4	ENSMUST00000136219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062651	H2al2a	ENSMUST00000105001	ENSMUSP00000100618	TRANSLATION	protein_coding	-	CCDS38050.1	-	111	0	1	0.5	41.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000049018	Olfr368	ENSMUST00000217299	ENSMUSP00000149348	TRANSLATION	protein_coding	-	CCDS15997.1	5	327	0	0.28	1.5	153.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049018	Olfr368	ENSMUST00000053990	ENSMUSP00000054082	TRANSLATION	protein_coding	-	CCDS15997.1	-	327	0	0.28	1.5	153.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000008999	Bmp7	ENSMUST00000137247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008999	Bmp7	ENSMUST00000009143	ENSMUSP00000009143	TRANSLATION	protein_coding	-	CCDS17136.1	1	430	0	4.15	8.8	441.5	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027655	Dhx35	ENSMUST00000148359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027655	Dhx35	ENSMUST00000156893	ENSMUSP00000119497	TRANSLATION	protein_coding	stop	-	3	213	9	4.19	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027655	Dhx35	ENSMUST00000029186	ENSMUSP00000029186	TRANSLATION	protein_coding	-	CCDS16993.1	1	679	10	16.39	1.5	149.7	0	-4,-5	-	-	14.538	MINOR
ENSMUSG00000027655	Dhx35	ENSMUST00000145692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027655	Dhx35	ENSMUST00000143195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027655	Dhx35	ENSMUST00000133720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027655	Dhx35	ENSMUST00000146797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027655	Dhx35	ENSMUST00000157070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027655	Dhx35	ENSMUST00000109478	ENSMUSP00000105104	TRANSLATION	protein_coding	-	-	5	703	10	16.99	13.8	190	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026662	Sephs1	ENSMUST00000115019	ENSMUSP00000110671	TRANSLATION	protein_coding	-	CCDS15659.1	1	392	14	8	21.5	107.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026662	Sephs1	ENSMUST00000144565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026662	Sephs1	ENSMUST00000140045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026662	Sephs1	ENSMUST00000027973	ENSMUSP00000027973	TRANSLATION	protein_coding	-	CCDS15659.1	1	392	14	8	21.5	107.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032724	Abtb2	ENSMUST00000076212	ENSMUSP00000075566	TRANSLATION	protein_coding	-	CCDS16479.1	1	1024	0	5.53	5.1	126.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032724	Abtb2	ENSMUST00000131122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032724	Abtb2	ENSMUST00000138580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027519	Rab22a	ENSMUST00000029024	ENSMUSP00000029024	TRANSLATION	protein_coding	-	CCDS38352.1	1	194	24	5.5	19.3	185.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027519	Rab22a	ENSMUST00000142820	ENSMUSP00000122799	TRANSLATION	nonsense_mediated_decay	-	-	1	68	12	1.55	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027519	Rab22a	ENSMUST00000109110	ENSMUSP00000104738	TRANSLATION	protein_coding	-	-	5	187	24	4.87	1	134.6	0	-4,-5	-	-	13.674	MINOR
ENSMUSG00000075256	Cerkl	ENSMUST00000130499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000145766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000152549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000143974	ENSMUSP00000114325	TRANSLATION	protein_coding	-	CCDS38157.1	1	525	10	3.132	0.5	87.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000075256	Cerkl	ENSMUST00000143602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000152413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000147402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000156731	ENSMUSP00000121353	TRANSLATION	protein_coding	start	-	3	107	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075256	Cerkl	ENSMUST00000156830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000153602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000123859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075256	Cerkl	ENSMUST00000099974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027635	Dsn1	ENSMUST00000154213	ENSMUSP00000122593	TRANSLATION	protein_coding	stop	-	1	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027635	Dsn1	ENSMUST00000124671	ENSMUSP00000120354	TRANSLATION	protein_coding	stop	-	5	124	0	1.33	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027635	Dsn1	ENSMUST00000103130	ENSMUSP00000099419	TRANSLATION	protein_coding	-	CCDS16972.1	1	348	0	7.81	1.5	217.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027635	Dsn1	ENSMUST00000141388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027635	Dsn1	ENSMUST00000103129	ENSMUSP00000099418	TRANSLATION	protein_coding	-	CCDS16972.1	1	348	0	7.81	1.5	217.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027635	Dsn1	ENSMUST00000146413	ENSMUSP00000122524	TRANSLATION	protein_coding	stop	-	5	232	0	4.31	0	100	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014077	Chp1	ENSMUST00000119172	ENSMUSP00000114013	TRANSLATION	protein_coding	-	-	2	191	16	5.33	0	46	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000014077	Chp1	ENSMUST00000154406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014077	Chp1	ENSMUST00000137585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014077	Chp1	ENSMUST00000014221	ENSMUSP00000014221	TRANSLATION	protein_coding	-	CCDS16604.1	1	195	16	5.83	17.5	46	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000014077	Chp1	ENSMUST00000132448	ENSMUSP00000122946	TRANSLATION	protein_coding	stop	-	5	33	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068686	Cd59b	ENSMUST00000129749	ENSMUSP00000117553	TRANSLATION	protein_coding	stop	-	3	129	0	1.6	0.5	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000068686	Cd59b	ENSMUST00000090429	ENSMUSP00000087912	TRANSLATION	protein_coding	-	CCDS16486.1	5	129	0	1.6	0.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000068686	Cd59b	ENSMUST00000111130	ENSMUSP00000106760	TRANSLATION	protein_coding	-	CCDS16486.1	1	129	0	1.6	0.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000068686	Cd59b	ENSMUST00000111131	ENSMUSP00000106761	TRANSLATION	protein_coding	-	-	1	88	0	1	0	0	0	3,-2	-	-	3.75	MINOR
ENSMUSG00000068686	Cd59b	ENSMUST00000111132	ENSMUSP00000106762	TRANSLATION	protein_coding	-	-	1	55	0	1	0	0	0	3,-2	-	-	3.75	MINOR
ENSMUSG00000074625	Arhgap40	ENSMUST00000165398	ENSMUSP00000130349	TRANSLATION	protein_coding	-	CCDS50787.1	5	672	0	3.3	1.5	139.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074625	Arhgap40	ENSMUST00000099133	ENSMUSP00000096736	TRANSLATION	protein_coding	start	-	5	675	0	3.3	1.5	139.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074625	Arhgap40	ENSMUST00000135838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075220	Olfr993	ENSMUST00000099926	ENSMUSP00000097510	TRANSLATION	protein_coding	-	CCDS16206.1	-	314	0	0.2	1.5	172.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074955	Olfr1305	ENSMUST00000213737	ENSMUSP00000149852	TRANSLATION	protein_coding	-	CCDS16535.1	5	312	0	0.3	6.4	139.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074955	Olfr1305	ENSMUST00000099608	ENSMUSP00000097203	TRANSLATION	protein_coding	-	CCDS16535.1	-	312	0	0.3	6.4	139.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074955	Olfr1305	ENSMUST00000213405	ENSMUSP00000149215	TRANSLATION	protein_coding	-	CCDS16535.1	5	312	0	0.3	6.4	139.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074955	Olfr1305	ENSMUST00000216310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075206	Olfr1024	ENSMUST00000099912	ENSMUSP00000097496	TRANSLATION	protein_coding	-	CCDS16227.1	-	327	0	0.36	0.5	173	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026737	Pip4k2a	ENSMUST00000006912	ENSMUSP00000006912	TRANSLATION	protein_coding	-	CCDS15712.1	1	405	2	9.91	11.5	254.3	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000026737	Pip4k2a	ENSMUST00000152981	ENSMUSP00000119075	TRANSLATION	protein_coding	start/stop	-	3	214	2	4.5	0	155.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026737	Pip4k2a	ENSMUST00000148583	ENSMUSP00000115475	TRANSLATION	protein_coding	start	-	5	83	0	1	0	26.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010505	Myt1	ENSMUST00000129843	ENSMUSP00000115697	TRANSLATION	protein_coding	start	-	1	787	20	7.23	0	533.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010505	Myt1	ENSMUST00000142245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010505	Myt1	ENSMUST00000129856	ENSMUSP00000122011	TRANSLATION	protein_coding	start/stop	-	5	604	17	4.93	0	520.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000010505	Myt1	ENSMUST00000130079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010505	Myt1	ENSMUST00000156190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010505	Myt1	ENSMUST00000223883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010505	Myt1	ENSMUST00000135744	ENSMUSP00000121394	TRANSLATION	protein_coding	stop	-	3	121	9	3.25	0	116.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000010505	Myt1	ENSMUST00000148766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010505	Myt1	ENSMUST00000081125	ENSMUSP00000079900	TRANSLATION	protein_coding	-	CCDS50856.1	1	1169	27	8.48	0.5	646.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000010505	Myt1	ENSMUST00000108756	ENSMUSP00000104387	TRANSLATION	protein_coding	-	CCDS17223.1	1	1127	27	8.48	0.5	646.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000010505	Myt1	ENSMUST00000183403	ENSMUSP00000139356	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010505	Myt1	ENSMUST00000108757	ENSMUSP00000104388	TRANSLATION	protein_coding	-	CCDS50857.1	1	1089	27	8.08	0.5	625.9	0	-4,-5	-	-	15.984	MINOR
ENSMUSG00000027071	P2rx3	ENSMUST00000145285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027071	P2rx3	ENSMUST00000127839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027071	P2rx3	ENSMUST00000028465	ENSMUSP00000028465	TRANSLATION	protein_coding	-	CCDS16200.1	1	397	0	9.75	6.3	496.1	1	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000027071	P2rx3	ENSMUST00000111613	ENSMUSP00000107240	TRANSLATION	protein_coding	-	-	5	395	0	9.75	6.3	492.3	1	-4,-7	-	-	13.772	ALTERNATIVE:1
ENSMUSG00000027071	P2rx3	ENSMUST00000111616	ENSMUSP00000107243	TRANSLATION	protein_coding	-	-	5	373	0	9	1	347.2	1	-4,-7	-	-	4.5	MINOR
ENSMUSG00000026766	Mmadhc	ENSMUST00000134480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026766	Mmadhc	ENSMUST00000140563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026766	Mmadhc	ENSMUST00000147345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026766	Mmadhc	ENSMUST00000152948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026766	Mmadhc	ENSMUST00000154254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026766	Mmadhc	ENSMUST00000102769	ENSMUSP00000099830	TRANSLATION	protein_coding	-	CCDS16027.1	1	296	0	5.1	12.8	433.8	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000026766	Mmadhc	ENSMUST00000133768	ENSMUSP00000115961	TRANSLATION	protein_coding	stop	-	3	179	0	2.1	0	198.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026766	Mmadhc	ENSMUST00000144143	ENSMUSP00000122804	TRANSLATION	protein_coding	stop	-	3	219	0	3.6	0	270	0	-4,0	-	-	-1	MINOR
ENSMUSG00000068394	Cep152	ENSMUST00000089776	ENSMUSP00000087208	TRANSLATION	protein_coding	-	CCDS38229.1	1	1736	0	1.75	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092356	Gm20532	ENSMUST00000174066	ENSMUSP00000133799	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	103	0	0	0	0	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000027568	Ntsr1	ENSMUST00000170448	ENSMUSP00000127548	TRANSLATION	protein_coding	-	CCDS17177.1	1	424	0	4	1.5	171.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027568	Ntsr1	ENSMUST00000029084	ENSMUSP00000029084	TRANSLATION	protein_coding	-	CCDS17177.1	1	424	0	4	1.5	171.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075188	Olfr1056	ENSMUST00000099893	ENSMUSP00000097478	TRANSLATION	protein_coding	-	CCDS16252.1	-	313	0	0.2	8.8	158.8	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075188	Olfr1056	ENSMUST00000216547	ENSMUSP00000149545	TRANSLATION	protein_coding	-	CCDS16252.1	5	313	0	0.2	8.8	158.8	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000079103	Tgm7	ENSMUST00000238428	ENSMUSP00000158669	TRANSLATION	protein_coding	start	-	-	707	7	10.62	0.5	240.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079103	Tgm7	ENSMUST00000110675	ENSMUSP00000106303	TRANSLATION	protein_coding	-	-	5	710	7	10.62	0.5	240.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026827	Gpd2	ENSMUST00000028167	ENSMUSP00000028167	TRANSLATION	protein_coding	-	CCDS16045.1	1	727	32	9.61	6.3	348.9	0	-1,0	-	-	19.202	PRINCIPAL:1
ENSMUSG00000026827	Gpd2	ENSMUST00000141536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026827	Gpd2	ENSMUST00000112618	ENSMUSP00000108237	TRANSLATION	protein_coding	-	-	5	745	32	10.01	0	348.9	0	-1,0	-	-	18	MINOR
ENSMUSG00000026827	Gpd2	ENSMUST00000124689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026827	Gpd2	ENSMUST00000154612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026827	Gpd2	ENSMUST00000148991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026827	Gpd2	ENSMUST00000169687	ENSMUSP00000130992	TRANSLATION	protein_coding	-	CCDS16045.1	1	727	32	9.61	6.3	348.9	0	-1,0	-	-	19.202	PRINCIPAL:1
ENSMUSG00000075113	Olfr1209	ENSMUST00000213136	ENSMUSP00000150607	TRANSLATION	protein_coding	-	CCDS16355.1	3	310	0	0.42	8.8	163.5	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075113	Olfr1209	ENSMUST00000099809	ENSMUSP00000097397	TRANSLATION	protein_coding	-	CCDS16355.1	-	310	0	0.42	8.8	163.5	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075113	Olfr1209	ENSMUST00000213240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074652	Myh7b	ENSMUST00000154656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074652	Myh7b	ENSMUST00000092995	ENSMUSP00000090672	TRANSLATION	protein_coding	-	CCDS50768.1	5	1941	15	37.628	2.7	1485.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074652	Myh7b	ENSMUST00000124415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027248	Pdia3	ENSMUST00000135079	ENSMUSP00000119337	TRANSLATION	nonsense_mediated_decay	start	-	5	124	4	3.11	0	112.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027248	Pdia3	ENSMUST00000130450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027248	Pdia3	ENSMUST00000028683	ENSMUSP00000028683	TRANSLATION	protein_coding	-	CCDS16643.1	1	505	8	12.775	5.1	317.6	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000027248	Pdia3	ENSMUST00000153378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056436	Cyct	ENSMUST00000028430	ENSMUSP00000028430	TRANSLATION	protein_coding	-	CCDS16156.1	1	105	27	2	21.5	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026644	Acbd7	ENSMUST00000115089	ENSMUSP00000110741	TRANSLATION	protein_coding	-	CCDS50485.1	1	88	12	2.5	21.5	94.9	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000026644	Acbd7	ENSMUST00000228935	ENSMUSP00000154392	TRANSLATION	protein_coding	-	-	-	89	12	2.5	21.5	93.5	0	-4,-5	-	-	21.91	ALTERNATIVE:1
ENSMUSG00000049149	Olfr1258	ENSMUST00000111516	ENSMUSP00000107141	TRANSLATION	protein_coding	-	CCDS16397.1	-	311	0	0.36	6.6	176.4	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049149	Olfr1258	ENSMUST00000213720	ENSMUSP00000149547	TRANSLATION	protein_coding	-	CCDS16397.1	5	311	0	0.36	6.6	176.4	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049149	Olfr1258	ENSMUST00000102609	ENSMUSP00000099669	TRANSLATION	protein_coding	-	CCDS16397.1	3	311	0	0.36	6.6	176.4	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027296	Itpka	ENSMUST00000028758	ENSMUSP00000028758	TRANSLATION	protein_coding	-	CCDS16607.1	1	459	23	5.55	5.1	139.6	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000023572	Ccndbp1	ENSMUST00000151532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023572	Ccndbp1	ENSMUST00000135036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023572	Ccndbp1	ENSMUST00000129717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023572	Ccndbp1	ENSMUST00000060455	ENSMUSP00000062496	TRANSLATION	protein_coding	-	CCDS38213.1	1	356	0	9.41	1.5	248.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000023572	Ccndbp1	ENSMUST00000099488	ENSMUSP00000097087	TRANSLATION	protein_coding	-	-	1	375	0	7.58	0	240.4	0	-4,-6	-	-	7.848	MINOR
ENSMUSG00000023572	Ccndbp1	ENSMUST00000099489	ENSMUSP00000097088	TRANSLATION	protein_coding	-	-	1	309	0	7.91	0	248.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000023572	Ccndbp1	ENSMUST00000171260	ENSMUSP00000125961	TRANSLATION	protein_coding	-	-	5	382	0	7.91	0	240.4	0	-4,-6	-	-	8.508	MINOR
ENSMUSG00000023572	Ccndbp1	ENSMUST00000140468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035093	Secisbp2l	ENSMUST00000053699	ENSMUSP00000055772	TRANSLATION	protein_coding	-	CCDS38230.1	1	1089	0	0	0.5	75.3	0	-4,-5	-	-	5.916	PRINCIPAL:1
ENSMUSG00000035093	Secisbp2l	ENSMUST00000139944	ENSMUSP00000121529	TRANSLATION	protein_coding	start	-	1	428	0	0	0	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035093	Secisbp2l	ENSMUST00000136450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027358	Bmp2	ENSMUST00000028836	ENSMUSP00000028836	TRANSLATION	protein_coding	-	CCDS16782.1	1	394	0	1.24	6.3	297.3	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000078898	Zfp968	ENSMUST00000109047	ENSMUSP00000104675	TRANSLATION	protein_coding	stop	-	3	485	53	2.05	0.5	316.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078898	Zfp968	ENSMUST00000131676	ENSMUSP00000116661	TRANSLATION	protein_coding	-	-	2	83	0	1.45	0	73.1	0	-4,-6	-	-	4.242	PRINCIPAL:1
ENSMUSG00000078898	Zfp968	ENSMUST00000109048	ENSMUSP00000104676	TRANSLATION	protein_coding	-	-	3	138	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000094932	Gm2007	ENSMUST00000189494	ENSMUSP00000141172	TRANSLATION	protein_coding	start	-	5	497	59	2.05	0.5	394.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094932	Gm2007	ENSMUST00000178133	ENSMUSP00000137539	TRANSLATION	protein_coding	-	-	5	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094932	Gm2007	ENSMUST00000177981	ENSMUSP00000136743	TRANSLATION	protein_coding	-	-	5	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000074812	Spdye4c	ENSMUST00000144559	ENSMUSP00000140478	TRANSLATION	nonsense_mediated_decay	-	-	5	339	0	0	1.5	174.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074812	Spdye4c	ENSMUST00000178601	ENSMUSP00000135991	TRANSLATION	protein_coding	start	-	1	172	0	0	0	174.1	0	-4,-2	-	-	-1	PRINCIPAL:3
ENSMUSG00000074812	Spdye4c	ENSMUST00000155430	ENSMUSP00000117916	TRANSLATION	protein_coding	stop	-	5	115	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000008226	Scrn3	ENSMUST00000139926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008226	Scrn3	ENSMUST00000090811	ENSMUSP00000088320	TRANSLATION	protein_coding	-	CCDS16128.1	1	418	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000008226	Scrn3	ENSMUST00000155019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008226	Scrn3	ENSMUST00000154158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008226	Scrn3	ENSMUST00000123621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008226	Scrn3	ENSMUST00000112050	ENSMUSP00000107681	TRANSLATION	protein_coding	-	-	1	189	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000002108	Nr1h3	ENSMUST00000002177	ENSMUSP00000002177	TRANSLATION	protein_coding	-	CCDS16426.1	1	445	8	7	5.1	198.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002108	Nr1h3	ENSMUST00000150654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002108	Nr1h3	ENSMUST00000111354	ENSMUSP00000106986	TRANSLATION	protein_coding	-	CCDS16426.1	1	445	8	7	5.1	198.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002108	Nr1h3	ENSMUST00000136234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002108	Nr1h3	ENSMUST00000111355	ENSMUSP00000106987	TRANSLATION	protein_coding	-	-	5	385	8	6	1.2	158	0	-4,-5	-	-	13.67	MINOR
ENSMUSG00000002108	Nr1h3	ENSMUST00000133261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002108	Nr1h3	ENSMUST00000130031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002108	Nr1h3	ENSMUST00000111356	ENSMUSP00000106988	TRANSLATION	protein_coding	-	CCDS16426.1	1	445	8	7	5.1	198.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026921	Egfl7	ENSMUST00000131112	ENSMUSP00000122245	TRANSLATION	protein_coding	start	-	2	71	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000238951	ENSMUSP00000158990	TRANSLATION	protein_coding	-	CCDS15807.2	-	278	11	2.235	2.9	102.3	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000026921	Egfl7	ENSMUST00000152988	ENSMUSP00000133968	TRANSLATION	protein_coding	-	-	2	79	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000149460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026921	Egfl7	ENSMUST00000100290	ENSMUSP00000097863	TRANSLATION	protein_coding	-	-	1	262	11	2.235	0.5	102.3	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026921	Egfl7	ENSMUST00000173777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026921	Egfl7	ENSMUST00000147351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026921	Egfl7	ENSMUST00000102907	ENSMUSP00000099971	TRANSLATION	protein_coding	-	-	1	275	11	2.235	2.9	102.3	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026921	Egfl7	ENSMUST00000139801	ENSMUSP00000123465	TRANSLATION	nonsense_mediated_decay	-	-	5	238	0	0.12	0	70.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000173920	ENSMUSP00000134503	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	70.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000174572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026921	Egfl7	ENSMUST00000238983	ENSMUSP00000158876	TRANSLATION	protein_coding	-	CCDS15807.2	-	278	11	2.235	2.9	102.3	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000026921	Egfl7	ENSMUST00000174465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026921	Egfl7	ENSMUST00000172683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026921	Egfl7	ENSMUST00000166920	ENSMUSP00000128741	TRANSLATION	protein_coding	-	-	1	275	11	2.235	2.9	102.3	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026921	Egfl7	ENSMUST00000145575	ENSMUSP00000118924	TRANSLATION	protein_coding	stop	-	2	151	8	1.62	0	70.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000149789	ENSMUSP00000133465	TRANSLATION	protein_coding	-	-	3	66	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000174211	ENSMUSP00000134034	TRANSLATION	protein_coding	-	CCDS15807.2	1	278	11	2.235	2.9	102.3	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000026921	Egfl7	ENSMUST00000174656	ENSMUSP00000134186	TRANSLATION	protein_coding	start	-	3	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000152713	ENSMUSP00000121896	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000026921	Egfl7	ENSMUST00000150404	ENSMUSP00000115482	TRANSLATION	protein_coding	-	-	5	275	11	2.235	2.9	102.3	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000026921	Egfl7	ENSMUST00000239075	ENSMUSP00000159032	TRANSLATION	protein_coding	-	-	-	275	11	2.235	2.9	102.3	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000027221	Chst1	ENSMUST00000065797	ENSMUSP00000064246	TRANSLATION	protein_coding	-	CCDS16450.1	1	411	0	0	7.5	206.7	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000075272	Ttc30a2	ENSMUST00000099995	ENSMUSP00000097575	TRANSLATION	protein_coding	-	CCDS38151.1	-	664	0	0.8	7.6	15	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000049315	Olfr348	ENSMUST00000056865	ENSMUSP00000054037	TRANSLATION	protein_coding	-	CCDS15980.1	-	313	0	0.42	1.5	190.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049315	Olfr348	ENSMUST00000213498	ENSMUSP00000151006	TRANSLATION	protein_coding	-	CCDS15980.1	3	313	0	0.42	1.5	190.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049315	Olfr348	ENSMUST00000215199	ENSMUSP00000150343	TRANSLATION	protein_coding	-	CCDS15980.1	3	313	0	0.42	1.5	190.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049315	Olfr348	ENSMUST00000214909	ENSMUSP00000150542	TRANSLATION	protein_coding	-	CCDS15980.1	5	313	0	0.42	1.5	190.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000017652	Cd40	ENSMUST00000153105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017652	Cd40	ENSMUST00000073707	ENSMUSP00000073386	TRANSLATION	protein_coding	-	CCDS17070.1	1	260	0	4.5	0.5	33.1	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000017652	Cd40	ENSMUST00000154443	ENSMUSP00000138707	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000017652	Cd40	ENSMUST00000184221	ENSMUSP00000139193	TRANSLATION	nonsense_mediated_decay	-	-	1	234	0	4.5	0	33.1	1	3,-2	-	-	-1	MINOR
ENSMUSG00000017652	Cd40	ENSMUST00000140951	ENSMUSP00000122981	TRANSLATION	protein_coding	stop	-	3	121	0	1.75	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000017652	Cd40	ENSMUST00000017799	ENSMUSP00000017799	TRANSLATION	protein_coding	-	CCDS17069.1	1	289	0	4.5	1.5	33.1	1	3,-2	-	-	12	PRINCIPAL:4
ENSMUSG00000017652	Cd40	ENSMUST00000081310	ENSMUSP00000080059	TRANSLATION	protein_coding	-	CCDS17071.1	1	203	0	3.75	1.5	33.1	0	3,-2	-	-	10.5	MINOR
ENSMUSG00000075203	Olfr1040	ENSMUST00000099909	ENSMUSP00000097493	TRANSLATION	protein_coding	-	CCDS16239.1	-	313	0	0.2	3.9	159.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000047907	Tshz2	ENSMUST00000109159	ENSMUSP00000104787	TRANSLATION	protein_coding	-	CCDS50805.1	1	1030	16	0.4	1.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047907	Tshz2	ENSMUST00000140699	ENSMUSP00000120013	TRANSLATION	protein_coding	start	-	1	208	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047907	Tshz2	ENSMUST00000123300	ENSMUSP00000118550	TRANSLATION	protein_coding	start	-	1	561	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047907	Tshz2	ENSMUST00000109157	ENSMUSP00000104785	TRANSLATION	protein_coding	-	CCDS50805.1	2	1030	16	0.4	1.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047907	Tshz2	ENSMUST00000185239	ENSMUSP00000140884	TRANSLATION	protein_coding	start	-	1	522	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047149	Olfr1052	ENSMUST00000054746	ENSMUSP00000058454	TRANSLATION	protein_coding	-	CCDS16250.1	-	312	0	0	6.4	172.1	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000047149	Olfr1052	ENSMUST00000215090	ENSMUSP00000149051	TRANSLATION	protein_coding	-	CCDS16250.1	5	312	0	0	6.4	172.1	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000047149	Olfr1052	ENSMUST00000217166	ENSMUSP00000149344	TRANSLATION	protein_coding	-	CCDS16250.1	5	312	0	0	6.4	172.1	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000049758	Olfr1318	ENSMUST00000215341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049758	Olfr1318	ENSMUST00000217533	ENSMUSP00000151164	TRANSLATION	protein_coding	-	CCDS16547.1	5	320	0	0.3	2.7	133.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049758	Olfr1318	ENSMUST00000214063	ENSMUSP00000148937	TRANSLATION	protein_coding	-	CCDS16547.1	5	320	0	0.3	2.7	133.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049758	Olfr1318	ENSMUST00000216873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049758	Olfr1318	ENSMUST00000058176	ENSMUSP00000051938	TRANSLATION	protein_coding	-	CCDS16547.1	-	320	0	0.3	2.7	133.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075222	Olfr988	ENSMUST00000215511	ENSMUSP00000151211	TRANSLATION	protein_coding	-	CCDS16204.1	5	309	0	0.3	6.3	171.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075222	Olfr988	ENSMUST00000099928	ENSMUSP00000097512	TRANSLATION	protein_coding	-	CCDS16204.1	-	309	0	0.3	6.3	171.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075222	Olfr988	ENSMUST00000111597	ENSMUSP00000107224	TRANSLATION	protein_coding	-	CCDS16204.1	3	309	0	0.3	6.3	171.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026726	Cubn	ENSMUST00000148506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026726	Cubn	ENSMUST00000195447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026726	Cubn	ENSMUST00000091436	ENSMUSP00000089009	TRANSLATION	protein_coding	-	CCDS38048.1	5	3623	72	26.6	1.5	2381.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000098505	Gm14496	ENSMUST00000071760	ENSMUSP00000071670	TRANSLATION	protein_coding	-	CCDS57205.1	5	849	3	2.94	0.5	375.4	7	3,-2	-	-	14.742	PRINCIPAL:2
ENSMUSG00000098505	Gm14496	ENSMUST00000089788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098505	Gm14496	ENSMUST00000184507	ENSMUSP00000157614	TRANSLATION	protein_coding	-	-	-	774	3	2.46	0	371.8	7	3,-2	-	-	13.566	MINOR
ENSMUSG00000098505	Gm14496	ENSMUST00000236373	ENSMUSP00000158134	TRANSLATION	protein_coding	-	-	-	848	3	3.06	0.5	375.7	7	3,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000027324	Rpusd2	ENSMUST00000028796	ENSMUSP00000028796	TRANSLATION	protein_coding	-	CCDS16588.1	1	553	2	0.92	1.5	109.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000040152	Thbs1	ENSMUST00000142588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040152	Thbs1	ENSMUST00000039559	ENSMUSP00000044903	TRANSLATION	protein_coding	-	CCDS38200.1	1	1171	118	17.14	7.5	767.8	0	1,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000074643	Cpne1	ENSMUST00000079312	ENSMUSP00000078292	TRANSLATION	protein_coding,RT	-	-	5	480	11	3.2086	0	270.9	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000184265	ENSMUSP00000138888	TRANSLATION	protein_coding,RT	-	-	5	161	5	1.2336	0	44.4	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000142975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074643	Cpne1	ENSMUST00000184933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074643	Cpne1	ENSMUST00000183733	ENSMUSP00000139230	TRANSLATION	nonsense_mediated_decay	start	-	3	197	0	0	0	147.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000126513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074643	Cpne1	ENSMUST00000147627	ENSMUSP00000116982	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	350	11	3.2086	0	149.7	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000184152	ENSMUSP00000139035	TRANSLATION	protein_coding	stop	-	3	123	5	0.78	0	44.6	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000147956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074643	Cpne1	ENSMUST00000136296	ENSMUSP00000122994	TRANSLATION	protein_coding,RT	stop	-	5	378	10	2.67	0	222.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000154889	ENSMUSP00000118140	TRANSLATION	protein_coding,RT	stop	-	5	127	5	1.095	0	44.4	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000109608	ENSMUSP00000105237	TRANSLATION	protein_coding,RT	-	CCDS16960.1	1	536	11	3.2086	7.6	379.7	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000074643	Cpne1	ENSMUST00000140109	ENSMUSP00000121998	TRANSLATION	protein_coding	start	-	5	211	0	0	0	171	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000183353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074643	Cpne1	ENSMUST00000142960	ENSMUSP00000121299	TRANSLATION	protein_coding,RT	stop	-	5	230	11	3.3586	0	90	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000153634	ENSMUSP00000115167	TRANSLATION	protein_coding,RT	stop	-	5	325	10	2.67	0	138.2	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074643	Cpne1	ENSMUST00000109607	ENSMUSP00000105236	TRANSLATION	protein_coding,RT	-	CCDS16960.1	1	536	11	3.2086	7.6	379.7	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000074643	Cpne1	ENSMUST00000133921	ENSMUSP00000122644	TRANSLATION	protein_coding,RT	stop	-	5	178	7	2.1586	0	44.4	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000035403	Crb2	ENSMUST00000137693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035403	Crb2	ENSMUST00000050372	ENSMUSP00000058007	TRANSLATION	protein_coding	-	CCDS50580.1	5	1282	4	6.43	0.5	312.3	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000035403	Crb2	ENSMUST00000147600	ENSMUSP00000144709	TRANSLATION	nonsense_mediated_decay	start	-	3	197	4	1.04	0	33.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027642	Rpn2	ENSMUST00000150349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000127252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000029171	ENSMUSP00000029171	TRANSLATION	protein_coding	-	-	5	615	0	0	1.2	694.6	2	4,-1	-	-	3.054	MINOR
ENSMUSG00000027642	Rpn2	ENSMUST00000125311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000126248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000116380	ENSMUSP00000112081	TRANSLATION	protein_coding	-	CCDS16975.1	1	631	0	0	8.8	745	2	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000027642	Rpn2	ENSMUST00000141934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027642	Rpn2	ENSMUST00000142463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000149924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027642	Rpn2	ENSMUST00000156007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027642	Rpn2	ENSMUST00000123639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000147873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000114134	ENSMUSP00000109769	TRANSLATION	protein_coding	-	-	3	236	0	2.08	0	156.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026930	Gpsm1	ENSMUST00000132638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000066936	ENSMUSP00000065000	TRANSLATION	protein_coding	-	CCDS15800.1	1	673	0	9.93	6.3	259.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026930	Gpsm1	ENSMUST00000127453	ENSMUSP00000120934	TRANSLATION	protein_coding	stop	-	3	88	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026930	Gpsm1	ENSMUST00000132276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000066889	ENSMUSP00000067964	TRANSLATION	protein_coding	-	CCDS57159.1	1	705	0	9.93	2.7	259.1	0	-4,-6	-	-	12.642	MINOR
ENSMUSG00000026930	Gpsm1	ENSMUST00000142057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000123981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000153064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026930	Gpsm1	ENSMUST00000078616	ENSMUSP00000077686	TRANSLATION	protein_coding	-	CCDS57158.1	1	613	0	9.93	0.5	259.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000026930	Gpsm1	ENSMUST00000145884	ENSMUSP00000115680	TRANSLATION	protein_coding	start	-	1	497	0	7.18	0	198.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026930	Gpsm1	ENSMUST00000152895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070866	Zfp804a	ENSMUST00000127187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070866	Zfp804a	ENSMUST00000047527	ENSMUSP00000041941	TRANSLATION	protein_coding	-	CCDS38160.1	1	1200	4	0	0.5	26	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000055612	Cdca7	ENSMUST00000102691	ENSMUSP00000099752	TRANSLATION	protein_coding	-	CCDS16121.1	1	382	7	0	0.5	125.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055612	Cdca7	ENSMUST00000127344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055612	Cdca7	ENSMUST00000130730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055612	Cdca7	ENSMUST00000137880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055612	Cdca7	ENSMUST00000157019	ENSMUSP00000121263	TRANSLATION	protein_coding	stop	-	5	192	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014852	Adamts13	ENSMUST00000014996	ENSMUSP00000014996	TRANSLATION	protein_coding	-	CCDS71010.1	1	1037	15	12.63	0.5	106.9	0	-2,-4	-	-	16.362	MINOR
ENSMUSG00000014852	Adamts13	ENSMUST00000102891	ENSMUSP00000099955	TRANSLATION	protein_coding	-	CCDS15820.1	1	1426	15	12.63	1.5	134.2	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000014852	Adamts13	ENSMUST00000147216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050468	Astl	ENSMUST00000179618	ENSMUSP00000135987	TRANSLATION	protein_coding	-	CCDS16700.1	1	414	5	4.23	0.5	182	0	-4,-7	-	-	17	PRINCIPAL:3
ENSMUSG00000050468	Astl	ENSMUST00000156747	ENSMUSP00000116771	TRANSLATION	protein_coding	stop	-	5	193	4	2.68	0	119.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050468	Astl	ENSMUST00000089673	ENSMUSP00000087102	TRANSLATION	protein_coding	-	CCDS71138.1	1	435	5	4.23	1.5	182	0	2,-3	-	-	17	ALTERNATIVE:2
ENSMUSG00000050468	Astl	ENSMUST00000059839	ENSMUSP00000054456	TRANSLATION	protein_coding	-	CCDS16700.1	1	414	5	4.23	0.5	182	0	-4,-7	-	-	17	PRINCIPAL:3
ENSMUSG00000027470	Mylk2	ENSMUST00000028970	ENSMUSP00000028970	TRANSLATION	protein_coding	-	CCDS38282.2	1	613	18	7.85	0.5	238.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075205	Olfr1037	ENSMUST00000216020	ENSMUSP00000150208	TRANSLATION	protein_coding	-	CCDS16237.1	3	321	0	0.2	2.7	183.5	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075205	Olfr1037	ENSMUST00000216886	ENSMUSP00000150319	TRANSLATION	protein_coding	-	CCDS16237.1	5	321	0	0.2	2.7	183.5	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075205	Olfr1037	ENSMUST00000213333	ENSMUSP00000149232	TRANSLATION	protein_coding	-	CCDS16237.1	5	321	0	0.2	2.7	183.5	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075205	Olfr1037	ENSMUST00000099911	ENSMUSP00000097495	TRANSLATION	protein_coding	-	CCDS16237.1	-	321	0	0.2	2.7	183.5	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027339	Rassf2	ENSMUST00000155829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027339	Rassf2	ENSMUST00000139047	ENSMUSP00000120194	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027339	Rassf2	ENSMUST00000103182	ENSMUSP00000099471	TRANSLATION	protein_coding	-	CCDS16768.1	5	326	0	1.57	7.5	107	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027339	Rassf2	ENSMUST00000140791	ENSMUSP00000117619	TRANSLATION	protein_coding	stop	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027339	Rassf2	ENSMUST00000028814	ENSMUSP00000028814	TRANSLATION	protein_coding	-	CCDS16768.1	1	326	0	1.57	7.5	107	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041997	Tlk1	ENSMUST00000124629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041997	Tlk1	ENSMUST00000152738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041997	Tlk1	ENSMUST00000133734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041997	Tlk1	ENSMUST00000135128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041997	Tlk1	ENSMUST00000132542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041997	Tlk1	ENSMUST00000038584	ENSMUSP00000035961	TRANSLATION	protein_coding	-	CCDS50599.1	1	766	20	4.27	7.5	207.8	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000041997	Tlk1	ENSMUST00000141707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075198	Olfr1045	ENSMUST00000099904	ENSMUSP00000097488	TRANSLATION	protein_coding	-	CCDS16244.1	-	315	0	0.3	7.6	146.6	4	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075198	Olfr1045	ENSMUST00000215763	ENSMUSP00000148982	TRANSLATION	protein_coding	-	CCDS16244.1	3	315	0	0.3	7.6	146.6	4	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075198	Olfr1045	ENSMUST00000216885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027651	Rprd1b	ENSMUST00000152452	ENSMUSP00000118434	TRANSLATION	protein_coding	-	-	1	224	0	4.78	0	133.3	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000027651	Rprd1b	ENSMUST00000109518	ENSMUSP00000105144	TRANSLATION	protein_coding	-	CCDS71176.1	1	294	0	5.78	0.5	207.8	0	-4,-5	-	-	5.112	MINOR
ENSMUSG00000027651	Rprd1b	ENSMUST00000029180	ENSMUSP00000029180	TRANSLATION	protein_coding	-	CCDS71177.1	1	326	0	6.78	12.8	289.3	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000027651	Rprd1b	ENSMUST00000156552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027651	Rprd1b	ENSMUST00000103123	ENSMUSP00000099412	TRANSLATION	protein_coding	-	CCDS16984.1	1	325	0	6.78	12.8	289.3	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027651	Rprd1b	ENSMUST00000128206	ENSMUSP00000117807	TRANSLATION	protein_coding	start	-	3	194	0	3.45	0	129.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027651	Rprd1b	ENSMUST00000135603	ENSMUSP00000122419	TRANSLATION	protein_coding	start/stop	-	3	143	0	2.45	0	127.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027651	Rprd1b	ENSMUST00000109519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000132516	ENSMUSP00000118382	TRANSLATION	nonsense_mediated_decay	start	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039254	Pomt1	ENSMUST00000036473	ENSMUSP00000038722	TRANSLATION	protein_coding	-	CCDS15908.1	1	746	0	3.2	1.5	539.5	9	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039254	Pomt1	ENSMUST00000146485	ENSMUSP00000116117	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	243.1	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000039254	Pomt1	ENSMUST00000132853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000138000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000129163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000192998	ENSMUSP00000142212	TRANSLATION	nonsense_mediated_decay	start	-	3	65	0	0.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039254	Pomt1	ENSMUST00000126784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000123740	ENSMUSP00000116543	TRANSLATION	protein_coding	stop	-	5	233	0	0	0	281.5	7	-3,-5	-	-	-1	MINOR
ENSMUSG00000039254	Pomt1	ENSMUST00000151598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039254	Pomt1	ENSMUST00000154684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027353	Mcm8	ENSMUST00000066559	ENSMUSP00000066842	TRANSLATION	protein_coding	-	CCDS16778.1	1	805	11	9.42	0.5	507.1	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000027353	Mcm8	ENSMUST00000028831	ENSMUSP00000028831	TRANSLATION	protein_coding	-	CCDS71152.1	1	833	11	9.42	3.9	507.1	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000027353	Mcm8	ENSMUST00000135685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040495	Chrm4	ENSMUST00000045537	ENSMUSP00000040808	TRANSLATION	protein_coding	-	CCDS16439.1	-	479	0	1	5.1	250.9	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000075160	Olfr259	ENSMUST00000215828	ENSMUSP00000149161	TRANSLATION	protein_coding	-	CCDS16281.1	5	312	0	0.36	1.5	179.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075160	Olfr259	ENSMUST00000213978	ENSMUSP00000149374	TRANSLATION	protein_coding	-	CCDS16281.1	5	312	0	0.36	1.5	179.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075160	Olfr259	ENSMUST00000216088	ENSMUSP00000151207	TRANSLATION	protein_coding	-	CCDS16281.1	3	312	0	0.36	1.5	179.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075160	Olfr259	ENSMUST00000099862	ENSMUSP00000097448	TRANSLATION	protein_coding	-	CCDS16281.1	-	312	0	0.36	1.5	179.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000017002	Slpi	ENSMUST00000167427	ENSMUSP00000129629	TRANSLATION	protein_coding	stop	-	5	34	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000017002	Slpi	ENSMUST00000165980	ENSMUSP00000128025	TRANSLATION	protein_coding	-	-	3	107	0	2.064	0	71.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000017002	Slpi	ENSMUST00000109367	ENSMUSP00000104992	TRANSLATION	protein_coding	-	CCDS17033.1	1	131	0	2.064	1.5	71.9	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000064289	Tank	ENSMUST00000154693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064289	Tank	ENSMUST00000143515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064289	Tank	ENSMUST00000112501	ENSMUSP00000108120	TRANSLATION	protein_coding	-	CCDS50592.1	1	414	4	0	1.5	88	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000064289	Tank	ENSMUST00000078074	ENSMUSP00000077219	TRANSLATION	protein_coding	-	CCDS16061.1	1	448	4	0	0.5	88	0	-4,-1	-	-	10	PRINCIPAL:3
ENSMUSG00000064289	Tank	ENSMUST00000145632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064289	Tank	ENSMUST00000139533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064289	Tank	ENSMUST00000141544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064289	Tank	ENSMUST00000112494	ENSMUSP00000108113	TRANSLATION	protein_coding	-	-	1	360	0	0	0	88	0	-4,-5	-	-	6	MINOR
ENSMUSG00000064289	Tank	ENSMUST00000112502	ENSMUSP00000108121	TRANSLATION	protein_coding	-	-	5	447	4	0	0.5	88	0	-4,-1	-	-	10	ALTERNATIVE:2
ENSMUSG00000064289	Tank	ENSMUST00000112495	ENSMUSP00000108114	TRANSLATION	protein_coding	-	CCDS50593.1	1	413	4	0	1.5	88	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000064289	Tank	ENSMUST00000136688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100899	Olfr1167	ENSMUST00000216951	ENSMUSP00000149599	TRANSLATION	protein_coding	-	CCDS16327.1	5	316	0	0.2	2.7	161	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100899	Olfr1167	ENSMUST00000099832	ENSMUSP00000097420	TRANSLATION	protein_coding	-	CCDS16327.1	-	316	0	0.2	2.7	161	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000015083	C8g	ENSMUST00000150580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015083	C8g	ENSMUST00000015227	ENSMUSP00000015227	TRANSLATION	protein_coding	-	CCDS71001.1	1	168	0	4.45	0.5	66.7	0	-2,0	-	-	11.202	ALTERNATIVE:2
ENSMUSG00000015083	C8g	ENSMUST00000040042	ENSMUSP00000041855	TRANSLATION	protein_coding	-	CCDS15777.1	1	202	0	4.85	1.7	66.7	0	4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000015083	C8g	ENSMUST00000154984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015083	C8g	ENSMUST00000149062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015083	C8g	ENSMUST00000133255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015083	C8g	ENSMUST00000153139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026856	Dolpp1	ENSMUST00000155196	ENSMUSP00000115602	TRANSLATION	nonsense_mediated_decay	start	-	3	89	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026856	Dolpp1	ENSMUST00000123202	ENSMUSP00000119478	TRANSLATION	protein_coding	-	CCDS71022.1	1	140	3	0	0.5	47.8	4	-2,-6	-	-	7.602	MINOR
ENSMUSG00000026856	Dolpp1	ENSMUST00000152303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026856	Dolpp1	ENSMUST00000151018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026856	Dolpp1	ENSMUST00000156059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026856	Dolpp1	ENSMUST00000137248	ENSMUSP00000116276	TRANSLATION	nonsense_mediated_decay	start	-	5	91	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000026856	Dolpp1	ENSMUST00000156704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026856	Dolpp1	ENSMUST00000133991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026856	Dolpp1	ENSMUST00000156984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026856	Dolpp1	ENSMUST00000028209	ENSMUSP00000028209	TRANSLATION	protein_coding	-	CCDS15881.1	1	238	3	0	17.5	62.3	8	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000026856	Dolpp1	ENSMUST00000113612	ENSMUSP00000109242	TRANSLATION	protein_coding	-	CCDS79768.1	3	195	1	0	5.1	38.1	7	-4,-6	-	-	5.663	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000238859	ENSMUSP00000158864	TRANSLATION	protein_coding	stop	-	-	322	24	6.3	0	288.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000113934	ENSMUSP00000109567	TRANSLATION	protein_coding	-	CCDS71011.1	1	439	27	9.3	7.3	374.8	0	-4,-6	-	-	19.902	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000166775	ENSMUSP00000133044	TRANSLATION	protein_coding	-	CCDS15830.1	5	467	27	9.7	7.2	379.8	0	-4,-6	-	-	20.952	PRINCIPAL:1
ENSMUSG00000015846	Rxra	ENSMUST00000100251	ENSMUSP00000097822	TRANSLATION	protein_coding	-	CCDS71011.1	1	439	27	9.3	7.3	374.8	0	-4,-6	-	-	19.902	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000238913	ENSMUSP00000159198	TRANSLATION	protein_coding	-	-	-	497	27	9.7	1.2	379.8	0	-1,-5	-	-	18.096	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000129514	ENSMUSP00000115165	TRANSLATION	protein_coding	stop	-	5	165	7	2.8	0	213.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015846	Rxra	ENSMUST00000077257	ENSMUSP00000076491	TRANSLATION	protein_coding	-	CCDS15830.1	1	467	27	9.7	7.2	379.8	0	-4,-6	-	-	20.952	PRINCIPAL:1
ENSMUSG00000015846	Rxra	ENSMUST00000148756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026815	Gfi1b	ENSMUST00000028156	ENSMUSP00000028156	TRANSLATION	protein_coding	-	CCDS15843.1	1	330	23	2.8	1.5	121.3	0	-4,-2	-	-	17.52	PRINCIPAL:3
ENSMUSG00000026815	Gfi1b	ENSMUST00000155686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026815	Gfi1b	ENSMUST00000145690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026815	Gfi1b	ENSMUST00000164290	ENSMUSP00000128052	TRANSLATION	protein_coding	-	CCDS50549.1	1	363	23	3.04	1.5	121.3	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000027088	Phospho2	ENSMUST00000151298	ENSMUSP00000118021	TRANSLATION	protein_coding	stop	-	2	50	4	0	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027088	Phospho2	ENSMUST00000028494	ENSMUSP00000028494	TRANSLATION	protein_coding	-	CCDS16099.1	1	241	9	0	7.5	320.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027088	Phospho2	ENSMUST00000180290	ENSMUSP00000136471	TRANSLATION	protein_coding	-	CCDS16099.1	1	241	9	0	7.5	320.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027088	Phospho2	ENSMUST00000112266	ENSMUSP00000107885	TRANSLATION	protein_coding	-	CCDS16099.1	3	241	9	0	7.5	320.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027088	Phospho2	ENSMUST00000131100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027088	Phospho2	ENSMUST00000128765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039983	Ccdc32	ENSMUST00000110834	ENSMUSP00000106458	TRANSLATION	protein_coding	-	-	1	134	0	0	0	150.7	0	-4,-5	-	-	2.736	MINOR
ENSMUSG00000039983	Ccdc32	ENSMUST00000110833	ENSMUSP00000106457	TRANSLATION	protein_coding	-	-	2	134	0	0	0	150.7	0	-4,-5	-	-	2.736	MINOR
ENSMUSG00000039983	Ccdc32	ENSMUST00000036470	ENSMUSP00000038589	TRANSLATION	protein_coding	-	CCDS50671.1	1	179	0	0	2.7	205.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026885	Ttll11	ENSMUST00000028248	ENSMUSP00000028248	TRANSLATION	protein_coding	-	CCDS50579.1	1	727	19	3.943	0.5	220.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000026885	Ttll11	ENSMUST00000112976	ENSMUSP00000108600	TRANSLATION	protein_coding	-	-	5	694	19	3.943	0	220.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026885	Ttll11	ENSMUST00000127742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026885	Ttll11	ENSMUST00000160284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026885	Ttll11	ENSMUST00000161970	ENSMUSP00000125627	TRANSLATION	nonsense_mediated_decay	-	-	5	190	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026885	Ttll11	ENSMUST00000160939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026885	Ttll11	ENSMUST00000160906	ENSMUSP00000125511	TRANSLATION	protein_coding	start	-	1	511	19	3.743	0	210.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026885	Ttll11	ENSMUST00000162172	ENSMUSP00000125199	TRANSLATION	protein_coding	stop	-	2	204	15	1.798	0	158	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026885	Ttll11	ENSMUST00000140201	ENSMUSP00000124510	TRANSLATION	protein_coding	stop	-	3	210	15	2.128	0	163.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033943	Mga	ENSMUST00000132054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000152148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000110774	ENSMUSP00000106401	TRANSLATION	protein_coding	-	CCDS38208.1	5	3042	0	2	0.5	337.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000033943	Mga	ENSMUST00000141776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033943	Mga	ENSMUST00000046717	ENSMUSP00000043795	TRANSLATION	protein_coding	-	-	5	3003	0	2	0	337.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033943	Mga	ENSMUST00000110773	ENSMUSP00000106400	TRANSLATION	protein_coding	-	-	5	2924	0	2	0	337.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033943	Mga	ENSMUST00000151074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000156074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000129405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000150742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033943	Mga	ENSMUST00000079934	ENSMUSP00000078853	TRANSLATION	protein_coding	-	CCDS50675.1	5	2833	0	2	0.5	337.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033943	Mga	ENSMUST00000138851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000131396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033943	Mga	ENSMUST00000122889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033943	Mga	ENSMUST00000156510	ENSMUSP00000119044	TRANSLATION	protein_coding	stop	-	1	2295	0	2	0	337.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042499	Hoxd11	ENSMUST00000048086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042499	Hoxd11	ENSMUST00000142312	ENSMUSP00000122582	TRANSLATION	protein_coding	-	CCDS16140.1	1	336	0	1	2.9	215	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075384	Olfr3	ENSMUST00000100151	ENSMUSP00000097728	TRANSLATION	protein_coding	-	CCDS15982.1	-	313	0	0.42	2.7	204.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075384	Olfr3	ENSMUST00000213988	ENSMUSP00000149118	TRANSLATION	protein_coding	-	CCDS15982.1	5	313	0	0.42	2.7	204.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079502	Cfap77	ENSMUST00000157048	ENSMUSP00000125742	TRANSLATION	protein_coding	-	CCDS50551.1	1	271	0	0	0.5	167.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000079502	Cfap77	ENSMUST00000189027	ENSMUSP00000140084	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079502	Cfap77	ENSMUST00000113843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079502	Cfap77	ENSMUST00000189711	ENSMUSP00000140645	TRANSLATION	protein_coding	-	-	5	283	0	0	1.5	167.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079502	Cfap77	ENSMUST00000190049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000889	Dbh	ENSMUST00000000910	ENSMUSP00000000910	TRANSLATION	protein_coding	-	CCDS38088.1	1	622	5	11.25	1.5	473.6	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000000889	Dbh	ENSMUST00000155290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075161	Olfr1109	ENSMUST00000217066	ENSMUSP00000149282	TRANSLATION	protein_coding	-	CCDS16280.1	5	312	0	0.24	1.5	172.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075161	Olfr1109	ENSMUST00000214636	ENSMUSP00000150159	TRANSLATION	protein_coding	-	CCDS16280.1	5	312	0	0.24	1.5	172.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075161	Olfr1109	ENSMUST00000099863	ENSMUSP00000097449	TRANSLATION	protein_coding	-	CCDS16280.1	-	312	0	0.24	1.5	172.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033096	Apmap	ENSMUST00000145325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033096	Apmap	ENSMUST00000126704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033096	Apmap	ENSMUST00000046399	ENSMUSP00000040840	TRANSLATION	protein_coding	-	CCDS16858.1	1	415	3	2.66	9.5	98.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026707	Nsun6	ENSMUST00000192769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026707	Nsun6	ENSMUST00000114715	ENSMUSP00000110363	TRANSLATION	protein_coding	-	CCDS50506.1	1	425	15	3.4	0.5	155.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000026707	Nsun6	ENSMUST00000195749	ENSMUSP00000141924	TRANSLATION	protein_coding	-	CCDS15703.1	5	476	15	3.4	1.5	155	0	-4,-5	-	-	17.976	PRINCIPAL:3
ENSMUSG00000026707	Nsun6	ENSMUST00000114713	ENSMUSP00000110361	TRANSLATION	protein_coding	-	CCDS50507.1	1	115	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026707	Nsun6	ENSMUST00000191911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026707	Nsun6	ENSMUST00000028034	ENSMUSP00000028034	TRANSLATION	protein_coding	-	CCDS15703.1	1	476	15	3.4	1.5	155	0	-4,-5	-	-	17.976	PRINCIPAL:3
ENSMUSG00000026707	Nsun6	ENSMUST00000194429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026707	Nsun6	ENSMUST00000076435	ENSMUSP00000075766	TRANSLATION	protein_coding	-	CCDS15703.1	1	476	15	3.4	1.5	155	0	-4,-5	-	-	17.976	PRINCIPAL:3
ENSMUSG00000026787	Gad2	ENSMUST00000028123	ENSMUSP00000028123	TRANSLATION	protein_coding	-	CCDS15724.1	1	585	17	12.15	7.5	451.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026787	Gad2	ENSMUST00000156728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033213	AA467197	ENSMUST00000047498	ENSMUSP00000040781	TRANSLATION	protein_coding	-	CCDS38224.1	1	83	0	0	6.3	81.2	1	-3,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000033213	AA467197	ENSMUST00000110512	ENSMUSP00000106141	TRANSLATION	protein_coding	-	CCDS38224.1	1	83	0	0	6.3	81.2	1	-3,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000033213	AA467197	ENSMUST00000142767	ENSMUSP00000117197	TRANSLATION	protein_coding	stop	-	5	70	0	0	0	78	1	-3,-4	-	-	-1	MINOR
ENSMUSG00000033213	AA467197	ENSMUST00000175727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063844	Olfr1276	ENSMUST00000218065	ENSMUSP00000151987	TRANSLATION	protein_coding	-	CCDS16516.1	5	312	0	0.42	6.4	135.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063844	Olfr1276	ENSMUST00000213658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063844	Olfr1276	ENSMUST00000073322	ENSMUSP00000073046	TRANSLATION	protein_coding	-	CCDS16516.1	-	312	0	0.42	6.4	135.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000101918	Olfr1225	ENSMUST00000188861	ENSMUSP00000140442	TRANSLATION	protein_coding	-	CCDS16369.1	-	311	0	0	1.5	159.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000101918	Olfr1225	ENSMUST00000217054	ENSMUSP00000150915	TRANSLATION	protein_coding	-	CCDS16369.1	5	311	0	0	1.5	159.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000101918	Olfr1225	ENSMUST00000216961	ENSMUSP00000149236	TRANSLATION	protein_coding	-	CCDS16369.1	5	311	0	0	1.5	159.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067787	Blcap	ENSMUST00000131902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067787	Blcap	ENSMUST00000088494	ENSMUSP00000085849	TRANSLATION	protein_coding	-	CCDS16979.1	1	87	0	0	19.5	93.5	1	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000067787	Blcap	ENSMUST00000134239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067787	Blcap	ENSMUST00000173378	ENSMUSP00000133386	TRANSLATION	protein_coding	stop	-	2	17	0	0	0	27.1	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000067787	Blcap	ENSMUST00000174336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067787	Blcap	ENSMUST00000109528	ENSMUSP00000105154	TRANSLATION	protein_coding	-	CCDS16979.1	1	87	0	0	19.5	93.5	1	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026867	Gapvd1	ENSMUST00000137528	ENSMUSP00000120138	TRANSLATION	protein_coding	start/stop	-	5	835	0	1.668	0	120.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000113101	ENSMUSP00000108725	TRANSLATION	protein_coding	start	-	5	548	0	3.2	0	100	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000138203	ENSMUSP00000127268	TRANSLATION	nonsense_mediated_decay	start	-	3	62	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000167251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026867	Gapvd1	ENSMUST00000028224	ENSMUSP00000028224	TRANSLATION	protein_coding	-	CCDS15949.1	1	1437	0	5.028	7.5	220.6	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000026867	Gapvd1	ENSMUST00000201772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026867	Gapvd1	ENSMUST00000142436	ENSMUSP00000126225	TRANSLATION	protein_coding	stop	-	3	146	0	0.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000128855	ENSMUSP00000129138	TRANSLATION	nonsense_mediated_decay	start	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000169207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026867	Gapvd1	ENSMUST00000113103	ENSMUSP00000108727	TRANSLATION	protein_coding	start/stop	-	1	828	0	1.02	0	102.2	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000113111	ENSMUSP00000108735	TRANSLATION	protein_coding	start	-	5	896	0	3.2	0	100	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026867	Gapvd1	ENSMUST00000113099	ENSMUSP00000108723	TRANSLATION	protein_coding	-	-	5	1458	0	5.028	7.5	220.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000026867	Gapvd1	ENSMUST00000102800	ENSMUSP00000099864	TRANSLATION	protein_coding	-	CCDS15949.1	1	1437	0	5.028	7.5	220.6	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000026867	Gapvd1	ENSMUST00000156098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026867	Gapvd1	ENSMUST00000150859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027076	Timm10	ENSMUST00000028470	ENSMUSP00000028470	TRANSLATION	protein_coding	-	CCDS38161.1	1	90	0	1.75	13.8	82.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027076	Timm10	ENSMUST00000111631	ENSMUSP00000107258	TRANSLATION	protein_coding	-	CCDS38161.1	3	90	0	1.75	13.8	82.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034780	B3galt1	ENSMUST00000042456	ENSMUSP00000041343	TRANSLATION	protein_coding	-	CCDS16083.1	1	326	0	0	11.5	204.6	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000034780	B3galt1	ENSMUST00000180887	ENSMUSP00000137947	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000034780	B3galt1	ENSMUST00000112346	ENSMUSP00000107965	TRANSLATION	protein_coding	-	CCDS16083.1	-	326	0	0	11.5	204.6	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000034780	B3galt1	ENSMUST00000188614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038400	Pmepa1	ENSMUST00000124124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038400	Pmepa1	ENSMUST00000036248	ENSMUSP00000039950	TRANSLATION	protein_coding	-	CCDS38350.1	1	274	0	0	1.5	0	1	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000038400	Pmepa1	ENSMUST00000139306	ENSMUSP00000115534	TRANSLATION	protein_coding	stop	-	3	238	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000026972	Arrdc1	ENSMUST00000156706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026972	Arrdc1	ENSMUST00000144963	ENSMUSP00000114684	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	1.106	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026972	Arrdc1	ENSMUST00000132074	ENSMUSP00000116352	TRANSLATION	protein_coding	start/stop	-	5	84	0	1.244	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026972	Arrdc1	ENSMUST00000129784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026972	Arrdc1	ENSMUST00000133396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026972	Arrdc1	ENSMUST00000155525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026972	Arrdc1	ENSMUST00000152240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026972	Arrdc1	ENSMUST00000155953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026972	Arrdc1	ENSMUST00000102935	ENSMUSP00000099999	TRANSLATION	protein_coding	-	CCDS15741.1	1	433	0	3.6886	1.5	109.9	0	-4,-7	-	-	11.442	PRINCIPAL:3
ENSMUSG00000026972	Arrdc1	ENSMUST00000142887	ENSMUSP00000117372	TRANSLATION	nonsense_mediated_decay	start	-	3	108	0	0.546	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026972	Arrdc1	ENSMUST00000028349	ENSMUSP00000028349	TRANSLATION	protein_coding	-	CCDS50521.1	1	434	0	3.5886	1.5	119.2	0	-4,-7	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000026972	Arrdc1	ENSMUST00000133934	ENSMUSP00000117695	TRANSLATION	protein_coding	stop	-	2	211	0	2.9086	0	82.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039873	Neurl2	ENSMUST00000042775	ENSMUSP00000041806	TRANSLATION	protein_coding	-	CCDS38330.1	1	285	0	0.24	3.9	154.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027313	Chac1	ENSMUST00000028780	ENSMUSP00000028780	TRANSLATION	protein_coding	-	CCDS16601.1	1	223	0	0.65	2.7	229.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040272	Accs	ENSMUST00000041593	ENSMUSP00000036268	TRANSLATION	protein_coding	-	CCDS16457.1	1	479	14	8.16	1.5	194.6	0	-4,-5	-	-	18.232	MINOR
ENSMUSG00000040272	Accs	ENSMUST00000068513	ENSMUSP00000065389	TRANSLATION	protein_coding	-	CCDS16457.1	5	479	14	8.16	1.5	194.6	0	-4,-5	-	-	18.232	MINOR
ENSMUSG00000040272	Accs	ENSMUST00000146436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000128719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000150666	ENSMUSP00000119096	TRANSLATION	nonsense_mediated_decay	start	-	5	75	0	1.65	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040272	Accs	ENSMUST00000149073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000111246	ENSMUSP00000106877	TRANSLATION	protein_coding	-	CCDS71105.1	1	502	14	8.16	5.3	194.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040272	Accs	ENSMUST00000140018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000146045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000130077	ENSMUSP00000114687	TRANSLATION	protein_coding	stop	-	3	156	4	2.09	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040272	Accs	ENSMUST00000141413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040272	Accs	ENSMUST00000148268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026866	Kynu	ENSMUST00000050511	ENSMUSP00000061775	TRANSLATION	protein_coding	-	CCDS79791.1	1	324	12	7.75	0.5	34.3	0	-4,-5	-	-	9.594	MINOR
ENSMUSG00000026866	Kynu	ENSMUST00000028223	ENSMUSP00000028223	TRANSLATION	protein_coding	-	CCDS16018.1	1	465	13	11	7.5	48.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026866	Kynu	ENSMUST00000148855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026866	Kynu	ENSMUST00000130968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026866	Kynu	ENSMUST00000112826	ENSMUSP00000108445	TRANSLATION	protein_coding	-	CCDS79792.1	1	428	12	10	0.5	48.3	0	-4,-5	-	-	15.336	MINOR
ENSMUSG00000026866	Kynu	ENSMUST00000138540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003662	Ciao1	ENSMUST00000174030	ENSMUSP00000134189	TRANSLATION	protein_coding	-	-	5	233	0	4.75	0	156	0	-4,-6	-	-	6.498	MINOR
ENSMUSG00000003662	Ciao1	ENSMUST00000172636	ENSMUSP00000134199	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	1	0	29.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003662	Ciao1	ENSMUST00000003759	ENSMUSP00000003759	TRANSLATION	protein_coding	-	CCDS16696.1	1	339	0	6.83	11	178.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000003662	Ciao1	ENSMUST00000174863	ENSMUSP00000134159	TRANSLATION	protein_coding	-	-	5	176	0	3.948	0	87.4	0	-4,-6	-	-	0.774	MINOR
ENSMUSG00000003662	Ciao1	ENSMUST00000143575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059205	Olfr1130	ENSMUST00000216580	ENSMUSP00000150905	TRANSLATION	protein_coding	-	CCDS16297.1	5	314	0	0.36	1.5	174.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059205	Olfr1130	ENSMUST00000213103	ENSMUSP00000150609	TRANSLATION	protein_coding	-	CCDS16297.1	3	314	0	0.36	1.5	174.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000136156	ENSMUSP00000155023	TRANSLATION	protein_coding	-	-	5	1415	0	0	1.5	936.9	2	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000089726	ENSMUSP00000106756	TRANSLATION	protein_coding	-	CCDS38190.1	5	1414	0	0	1.5	934.1	2	-4,-6	-	-	5.832	PRINCIPAL:2
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000156278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000155458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000141159	ENSMUSP00000117041	TRANSLATION	protein_coding	-	-	5	1300	0	0	0.5	936.9	2	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000149165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068373	D430041D05Rik	ENSMUST00000230671	ENSMUSP00000155485	TRANSLATION	protein_coding	-	-	-	2099	0	0	0	936.9	2	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000079421	4930402F06Rik	ENSMUST00000113010	ENSMUSP00000108633	TRANSLATION	protein_coding	-	CCDS38108.1	1	332	22	2.2	1.5	403.9	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000079421	4930402F06Rik	ENSMUST00000113009	ENSMUSP00000108632	TRANSLATION	protein_coding	-	CCDS71041.1	1	301	22	2.2	0.5	403.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000045967	Gpr158	ENSMUST00000155760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045967	Gpr158	ENSMUST00000055946	ENSMUSP00000049708	TRANSLATION	protein_coding	-	CCDS15722.1	1	1200	0	0	0.5	125.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035392	Dennd1a	ENSMUST00000126889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035392	Dennd1a	ENSMUST00000143095	ENSMUSP00000116018	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	1.145	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035392	Dennd1a	ENSMUST00000205218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035392	Dennd1a	ENSMUST00000150896	ENSMUSP00000116723	TRANSLATION	nonsense_mediated_decay	-	-	3	103	0	2.805	0	47.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035392	Dennd1a	ENSMUST00000136460	ENSMUSP00000115527	TRANSLATION	protein_coding	start/stop	-	5	277	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035392	Dennd1a	ENSMUST00000142813	ENSMUSP00000116396	TRANSLATION	nonsense_mediated_decay	-	-	3	80	0	0.645	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035392	Dennd1a	ENSMUST00000102787	ENSMUSP00000099848	TRANSLATION	protein_coding	-	CCDS16007.1	1	1016	0	11.555	0.5	250.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035392	Dennd1a	ENSMUST00000128492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035392	Dennd1a	ENSMUST00000136116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035392	Dennd1a	ENSMUST00000130472	ENSMUSP00000119892	TRANSLATION	protein_coding	stop	-	2	105	0	2.895	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035392	Dennd1a	ENSMUST00000140552	ENSMUSP00000120998	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.645	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037014	Sstr4	ENSMUST00000109962	ENSMUSP00000105588	TRANSLATION	protein_coding	-	CCDS38260.1	-	385	0	0.8	1.5	200.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034216	Vps18	ENSMUST00000151500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034216	Vps18	ENSMUST00000037280	ENSMUSP00000036915	TRANSLATION	protein_coding	-	CCDS16599.1	1	973	5	0	7.5	164.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034216	Vps18	ENSMUST00000139367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115074	Ndor1	ENSMUST00000228052	ENSMUSP00000154261	TRANSLATION	protein_coding,RT	-	-	-	662	17	8.36	0.5	235.5	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000140657	ENSMUSP00000118982	TRANSLATION	protein_coding	stop	-	5	141	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000139116	ENSMUSP00000115643	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000109617	ENSMUSP00000105246	TRANSLATION	protein_coding	-	CCDS50775.1	5	194	0	0	0.5	0	0	0,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000144686	ENSMUSP00000120293	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000086145	ENSMUSP00000083314	TRANSLATION	protein_coding	-	CCDS50774.1	1	108	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000138025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000141437	ENSMUSP00000114957	TRANSLATION	protein_coding	stop	-	5	112	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000124812	ENSMUSP00000116229	TRANSLATION	nonsense_mediated_decay	-	-	2	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074646	6430550D23Rik	ENSMUST00000156993	ENSMUSP00000115694	TRANSLATION	protein_coding	stop	-	5	50	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027355	Tmco5	ENSMUST00000028834	ENSMUSP00000028834	TRANSLATION	protein_coding	-	CCDS16569.1	1	303	0	0	1.5	367.9	2	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027355	Tmco5	ENSMUST00000123598	ENSMUSP00000115690	TRANSLATION	protein_coding	stop	-	5	250	0	0	0	244.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000027355	Tmco5	ENSMUST00000146144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027355	Tmco5	ENSMUST00000155470	ENSMUSP00000122739	TRANSLATION	protein_coding	stop	-	1	226	0	0	0	149.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055882	Abhd16b	ENSMUST00000069649	ENSMUSP00000066520	TRANSLATION	protein_coding	-	CCDS17213.1	-	474	0	0	2.7	37.4	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068079	Tcf15	ENSMUST00000089112	ENSMUSP00000086511	TRANSLATION	protein_coding	-	CCDS16878.1	1	195	0	0.6	6.3	63.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027551	Zfp64	ENSMUST00000087971	ENSMUSP00000085285	TRANSLATION	protein_coding	-	CCDS50804.1	1	676	39	2.4	0.5	221.3	0	-4,-5	-	-	8.358	MINOR
ENSMUSG00000027551	Zfp64	ENSMUST00000136242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027551	Zfp64	ENSMUST00000109161	ENSMUSP00000104789	TRANSLATION	protein_coding	-	-	1	272	17	2.41	0	69.8	0	-4,-5	-	-	2.382	MINOR
ENSMUSG00000027551	Zfp64	ENSMUST00000109162	ENSMUSP00000104790	TRANSLATION	protein_coding	-	-	2	643	56	4.22	0	200.6	0	-4,-5	-	-	16.758	PRINCIPAL:1
ENSMUSG00000027551	Zfp64	ENSMUST00000124599	ENSMUSP00000116460	TRANSLATION	protein_coding	stop	-	5	84	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060445	Sycp2	ENSMUST00000081134	ENSMUSP00000079909	TRANSLATION	protein_coding	-	CCDS38370.1	1	1500	0	10.66	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060445	Sycp2	ENSMUST00000132611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060445	Sycp2	ENSMUST00000138175	ENSMUSP00000116917	TRANSLATION	protein_coding	stop	-	5	185	0	4.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060445	Sycp2	ENSMUST00000132765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049252	Lrp1b	ENSMUST00000203080	ENSMUSP00000145278	TRANSLATION	protein_coding	stop	-	5	781	46	11.19	0	395.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000138700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049252	Lrp1b	ENSMUST00000142688	ENSMUSP00000144957	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000204204	ENSMUSP00000145045	TRANSLATION	protein_coding	-	-	2	68	7	1	0	48.3	0	1,-3	-	-	0	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000134032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049252	Lrp1b	ENSMUST00000185258	ENSMUSP00000139874	TRANSLATION	protein_coding	start	-	5	157	0	0.3	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000133104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049252	Lrp1b	ENSMUST00000052550	ENSMUSP00000054275	TRANSLATION	protein_coding	-	CCDS84520.1	1	4599	139	38.172	1.7	1761.6	2	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000049252	Lrp1b	ENSMUST00000203015	ENSMUSP00000145066	TRANSLATION	protein_coding	start/stop	-	5	288	7	2.844	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000167270	ENSMUSP00000129192	TRANSLATION	protein_coding	start/stop	-	5	3357	87	25.688	0	1313.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049252	Lrp1b	ENSMUST00000129974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049252	Lrp1b	ENSMUST00000142546	ENSMUSP00000117212	TRANSLATION	protein_coding	start	-	1	798	16	8.484	0	111.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000074952	Olfr1308	ENSMUST00000099605	ENSMUSP00000097200	TRANSLATION	protein_coding	-	CCDS16538.1	-	320	0	0.36	1.5	134	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074952	Olfr1308	ENSMUST00000207560	ENSMUSP00000146688	TRANSLATION	protein_coding	-	CCDS16538.1	3	320	0	0.36	1.5	134	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042894	Olfr1260	ENSMUST00000213162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042894	Olfr1260	ENSMUST00000144710	ENSMUSP00000119512	TRANSLATION	protein_coding	stop	-	2	169	0	1	0	74.5	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000042894	Olfr1260	ENSMUST00000216744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042894	Olfr1260	ENSMUST00000214630	ENSMUSP00000151110	TRANSLATION	protein_coding	stop	-	5	217	0	1	0	93.8	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000042894	Olfr1260	ENSMUST00000144613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042894	Olfr1260	ENSMUST00000061830	ENSMUSP00000053523	TRANSLATION	protein_coding	-	CCDS16399.1	-	310	0	1.6	2.7	153.4	12	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042894	Olfr1260	ENSMUST00000216678	ENSMUSP00000149289	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	28.6	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000042894	Olfr1260	ENSMUST00000111512	ENSMUSP00000107137	TRANSLATION	protein_coding	-	CCDS16399.1	2	310	0	1.6	2.7	153.4	12	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042894	Olfr1260	ENSMUST00000141685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075097	Olfr1226	ENSMUST00000220416	ENSMUSP00000151855	TRANSLATION	protein_coding	-	CCDS16370.1	5	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000216445	ENSMUSP00000150215	TRANSLATION	protein_coding	-	CCDS16370.1	5	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000215562	ENSMUSP00000148951	TRANSLATION	protein_coding	-	CCDS16370.1	5	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000214709	ENSMUSP00000149647	TRANSLATION	protein_coding	-	CCDS16370.1	3	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000217601	ENSMUSP00000151063	TRANSLATION	protein_coding	-	CCDS16370.1	5	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000099790	ENSMUSP00000097378	TRANSLATION	protein_coding	-	CCDS16370.1	-	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075097	Olfr1226	ENSMUST00000215987	ENSMUSP00000148955	TRANSLATION	protein_coding	-	CCDS16370.1	5	310	0	0.36	2.7	158.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075164	Olfr1106	ENSMUST00000217650	ENSMUSP00000149092	TRANSLATION	protein_coding	-	CCDS16278.1	5	312	0	0	6.4	179.9	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000075164	Olfr1106	ENSMUST00000099867	ENSMUSP00000097452	TRANSLATION	protein_coding	-	CCDS16278.1	-	312	0	0	6.4	179.9	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000075164	Olfr1106	ENSMUST00000213781	ENSMUSP00000149079	TRANSLATION	protein_coding	-	CCDS16278.1	5	312	0	0	6.4	179.9	5	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000017679	Ttpal	ENSMUST00000152135	ENSMUSP00000121669	TRANSLATION	protein_coding	stop	-	2	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017679	Ttpal	ENSMUST00000109405	ENSMUSP00000105032	TRANSLATION	nonsense_mediated_decay	-	-	1	168	0	0.6	0	33.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017679	Ttpal	ENSMUST00000156839	ENSMUSP00000121527	TRANSLATION	protein_coding	stop	-	3	195	0	1.4	0	67.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017679	Ttpal	ENSMUST00000132904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017679	Ttpal	ENSMUST00000171696	ENSMUSP00000128922	TRANSLATION	protein_coding	-	CCDS38317.1	1	343	0	3.2	7.6	149.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000017679	Ttpal	ENSMUST00000109408	ENSMUSP00000105035	TRANSLATION	protein_coding	-	CCDS38317.1	1	343	0	3.2	7.6	149.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000017679	Ttpal	ENSMUST00000144729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027200	Sema6d	ENSMUST00000137172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027200	Sema6d	ENSMUST00000132088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027200	Sema6d	ENSMUST00000076335	ENSMUSP00000075674	TRANSLATION	protein_coding	-	CCDS16671.1	1	998	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000103240	ENSMUSP00000099530	TRANSLATION	protein_coding	-	CCDS71132.1	1	1069	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000103238	ENSMUSP00000099528	TRANSLATION	protein_coding	-	CCDS16672.1	1	1054	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	PRINCIPAL:4
ENSMUSG00000027200	Sema6d	ENSMUST00000103239	ENSMUSP00000099529	TRANSLATION	protein_coding	-	CCDS16673.1	5	1073	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000051419	ENSMUSP00000061123	TRANSLATION	protein_coding	-	CCDS16670.1	1	1011	0	12.565	5.3	470.1	2	4,-1	-	-	14	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000103241	ENSMUSP00000099531	TRANSLATION	protein_coding	-	CCDS16671.1	5	998	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000077847	ENSMUSP00000077014	TRANSLATION	protein_coding	-	CCDS16672.1	5	1054	0	12.425	5.3	469.6	2	4,-1	-	-	13.688	ALTERNATIVE:1
ENSMUSG00000027200	Sema6d	ENSMUST00000151199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027200	Sema6d	ENSMUST00000078621	ENSMUSP00000077691	TRANSLATION	protein_coding	-	CCDS38225.1	5	1030	0	12.565	5.3	470.1	2	4,-1	-	-	14	ALTERNATIVE:1
ENSMUSG00000075128	Olfr1177-ps	ENSMUST00000137895	ENSMUSP00000154417	TRANSLATION	protein_coding	start/stop	-	-	307	0	0.14	0	152.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000075128	Olfr1177-ps	ENSMUST00000216713	ENSMUSP00000153831	TRANSLATION	protein_coding	-	-	3	319	0	0.14	0	154.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037843	Vstm2l	ENSMUST00000109523	ENSMUSP00000105149	TRANSLATION	protein_coding	-	CCDS50784.1	5	202	0	0	6.3	39.8	0	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000027406	Idh3b	ENSMUST00000124868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027406	Idh3b	ENSMUST00000028892	ENSMUSP00000028892	TRANSLATION	protein_coding	-	CCDS16738.1	1	384	14	8.775	4.1	257.1	0	-1,2	-	-	18.82	PRINCIPAL:2
ENSMUSG00000027406	Idh3b	ENSMUST00000184538	ENSMUSP00000139331	TRANSLATION	nonsense_mediated_decay	start	-	3	80	0	2.5	0	50.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027406	Idh3b	ENSMUST00000149843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027406	Idh3b	ENSMUST00000239288	ENSMUSP00000159209	TRANSLATION	protein_coding	-	-	-	380	14	8.775	4.1	260.1	0	-1,2	-	-	19	ALTERNATIVE:2
ENSMUSG00000038537	Mc3r	ENSMUST00000038532	ENSMUSP00000047358	TRANSLATION	protein_coding	-	CCDS17127.1	-	323	0	0.36	5.3	117.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075215	Olfr1000	ENSMUST00000216571	ENSMUSP00000150731	TRANSLATION	protein_coding	-	CCDS16211.1	5	314	0	0.12	4	167.8	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075215	Olfr1000	ENSMUST00000213837	ENSMUSP00000149982	TRANSLATION	protein_coding	-	CCDS16211.1	3	314	0	0.12	4	167.8	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075215	Olfr1000	ENSMUST00000099921	ENSMUSP00000097505	TRANSLATION	protein_coding	-	CCDS16211.1	-	314	0	0.12	4	167.8	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046975	Olfr1020	ENSMUST00000055840	ENSMUSP00000058242	TRANSLATION	protein_coding	-	CCDS16224.1	-	317	0	0	4	182.4	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000046975	Olfr1020	ENSMUST00000215347	ENSMUSP00000150285	TRANSLATION	protein_coding	-	CCDS16224.1	3	317	0	0	4	182.4	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000089762	Ier5l	ENSMUST00000065134	ENSMUSP00000132594	TRANSLATION	protein_coding	-	CCDS38095.1	-	406	0	0	0.5	459.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068817	Olfr1140	ENSMUST00000214723	ENSMUSP00000149706	TRANSLATION	protein_coding	-	CCDS16306.1	5	311	0	0.2	6.4	150.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000068817	Olfr1140	ENSMUST00000217102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068817	Olfr1140	ENSMUST00000217572	ENSMUSP00000149645	TRANSLATION	protein_coding	-	CCDS16306.1	-	311	0	0.2	6.4	150.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000061809	Tbpl2	ENSMUST00000080453	ENSMUSP00000079309	TRANSLATION	protein_coding	-	CCDS15732.1	1	350	0	4.5	0.5	210.4	0	-4,-6	-	-	11.82	PRINCIPAL:1
ENSMUSG00000061809	Tbpl2	ENSMUST00000153338	ENSMUSP00000120310	TRANSLATION	protein_coding	start	-	1	348	0	4.5	0.5	213.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050592	Fam78a	ENSMUST00000139629	ENSMUSP00000115010	TRANSLATION	nonsense_mediated_decay	-	-	1	283	0	0	8.8	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050592	Fam78a	ENSMUST00000056406	ENSMUSP00000052826	TRANSLATION	protein_coding	-	CCDS15905.1	1	283	0	0	8.8	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000050592	Fam78a	ENSMUST00000143795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050592	Fam78a	ENSMUST00000130178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068735	Trp53i11	ENSMUST00000140172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068735	Trp53i11	ENSMUST00000150462	ENSMUSP00000115918	TRANSLATION	protein_coding	stop	-	5	87	0	0	0	141.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000068735	Trp53i11	ENSMUST00000111266	ENSMUSP00000106897	TRANSLATION	protein_coding	-	CCDS16452.1	1	189	0	0	15	285.4	4	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000068735	Trp53i11	ENSMUST00000127173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068735	Trp53i11	ENSMUST00000147377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068735	Trp53i11	ENSMUST00000132182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068735	Trp53i11	ENSMUST00000090554	ENSMUSP00000088042	TRANSLATION	protein_coding	-	CCDS16452.1	1	189	0	0	15	285.4	4	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000068735	Trp53i11	ENSMUST00000143164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027459	Fam110a	ENSMUST00000062047	ENSMUSP00000053266	TRANSLATION	protein_coding	-	CCDS16875.1	1	296	0	0	7.5	229.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000027459	Fam110a	ENSMUST00000109864	ENSMUSP00000105490	TRANSLATION	protein_coding	-	CCDS16875.1	1	296	0	0	7.5	229.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000027459	Fam110a	ENSMUST00000109863	ENSMUSP00000105489	TRANSLATION	protein_coding	-	CCDS16875.1	1	296	0	0	7.5	229.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000027459	Fam110a	ENSMUST00000109865	ENSMUSP00000105491	TRANSLATION	protein_coding	-	CCDS16875.1	2	296	0	0	7.5	229.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000027107	Chrna1	ENSMUST00000028515	ENSMUSP00000028515	TRANSLATION	protein_coding	-	CCDS16132.1	1	457	3	7.85	7.2	460.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000060988	Galnt13	ENSMUST00000112634	ENSMUSP00000108253	TRANSLATION	protein_coding	-	-	1	592	23	9.53	0	194.2	1	0,-5	-	-	14.544	MINOR
ENSMUSG00000060988	Galnt13	ENSMUST00000112635	ENSMUSP00000108254	TRANSLATION	protein_coding	-	CCDS16041.1	1	556	23	10.03	15.3	235.1	1	0,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060988	Galnt13	ENSMUST00000136642	ENSMUSP00000115879	TRANSLATION	protein_coding	stop	-	2	96	0	0	0	0	1	0,-5	-	-	-1	MINOR
ENSMUSG00000060988	Galnt13	ENSMUST00000068595	ENSMUSP00000063464	TRANSLATION	protein_coding	-	CCDS16041.1	1	556	23	10.03	15.3	235.1	1	0,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060988	Galnt13	ENSMUST00000112636	ENSMUSP00000108255	TRANSLATION	protein_coding	-	CCDS16041.1	1	556	23	10.03	15.3	235.1	1	0,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025816	Sec61a2	ENSMUST00000124859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025816	Sec61a2	ENSMUST00000026926	ENSMUSP00000026926	TRANSLATION	protein_coding	-	-	5	175	0	4.7	0	0	4	-4,-7	-	-	0	MINOR
ENSMUSG00000025816	Sec61a2	ENSMUST00000194565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025816	Sec61a2	ENSMUST00000132908	ENSMUSP00000141220	TRANSLATION	protein_coding	start	-	3	120	0	2.75	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000025816	Sec61a2	ENSMUST00000102981	ENSMUSP00000100046	TRANSLATION	protein_coding	-	CCDS15668.1	1	476	0	11	19.5	0	14	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000025816	Sec61a2	ENSMUST00000132469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025816	Sec61a2	ENSMUST00000124985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025816	Sec61a2	ENSMUST00000153240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025816	Sec61a2	ENSMUST00000193792	ENSMUSP00000141333	TRANSLATION	protein_coding	-	-	1	410	0	9	0	0	13	-4,-7	-	-	1.998	MINOR
ENSMUSG00000025816	Sec61a2	ENSMUST00000148745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050577	Olfr1038-ps	ENSMUST00000216665	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000050577	Olfr1038-ps	ENSMUST00000149775	ENSMUSP00000150964	TRANSLATION	protein_coding	-	-	5	318	0	0.6	5.2	192.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074968	Ano3	ENSMUST00000111019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074968	Ano3	ENSMUST00000140777	ENSMUSP00000122387	TRANSLATION	protein_coding	start	-	3	181	0	0.39	0	117	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000074968	Ano3	ENSMUST00000099623	ENSMUSP00000097219	TRANSLATION	protein_coding	-	CCDS50658.1	5	981	0	3.39	5.1	774	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000098004	Gm27027	ENSMUST00000183110	ENSMUSP00000138281	TRANSLATION	protein_coding,RT	start	-	3	97	11	1	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027074	Slc43a3	ENSMUST00000141650	ENSMUSP00000116513	TRANSLATION	protein_coding	stop	-	5	169	0	0	0	0	5	0,-3	-	-	-1	MINOR
ENSMUSG00000027074	Slc43a3	ENSMUST00000138719	ENSMUSP00000121959	TRANSLATION	protein_coding	stop	-	2	97	0	0	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000027074	Slc43a3	ENSMUST00000155537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027074	Slc43a3	ENSMUST00000090726	ENSMUSP00000088227	TRANSLATION	protein_coding	-	CCDS38164.1	1	502	0	0	1.5	67.2	8	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000027074	Slc43a3	ENSMUST00000155506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027074	Slc43a3	ENSMUST00000130278	ENSMUSP00000119122	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000027577	Chrna4	ENSMUST00000124400	ENSMUSP00000123043	TRANSLATION	protein_coding	stop	-	5	78	0	1.5	0	62	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027577	Chrna4	ENSMUST00000198922	ENSMUSP00000143253	TRANSLATION	protein_coding	start	-	5	125	0	1.6	0	96.1	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000027577	Chrna4	ENSMUST00000135766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027577	Chrna4	ENSMUST00000067120	ENSMUSP00000066338	TRANSLATION	protein_coding	-	CCDS17192.1	1	629	0	5.55	0.5	620.5	3	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000027577	Chrna4	ENSMUST00000108851	ENSMUSP00000104479	TRANSLATION	protein_coding	-	-	5	641	0	5.55	0	620.5	3	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000005505	Kbtbd4	ENSMUST00000111464	ENSMUSP00000107089	TRANSLATION	protein_coding	-	CCDS79820.1	1	534	0	1.96	7.5	153.9	0	-4,-5	-	-	14.67	ALTERNATIVE:1
ENSMUSG00000005505	Kbtbd4	ENSMUST00000140945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005505	Kbtbd4	ENSMUST00000124284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005505	Kbtbd4	ENSMUST00000155372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005505	Kbtbd4	ENSMUST00000090682	ENSMUSP00000088179	TRANSLATION	protein_coding	-	CCDS16419.1	1	518	0	1.96	8.3	153.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000070852	Olfr1121	ENSMUST00000213792	ENSMUSP00000150120	TRANSLATION	protein_coding	-	CCDS16288.1	5	314	0	0.42	1.5	182.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070852	Olfr1121	ENSMUST00000062555	ENSMUSP00000058201	TRANSLATION	protein_coding	-	CCDS16288.1	-	314	0	0.42	1.5	182.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050603	Olfr1008	ENSMUST00000054868	ENSMUSP00000061191	TRANSLATION	protein_coding	-	CCDS16215.1	-	313	0	0.2	5.1	157.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026779	Mastl	ENSMUST00000136207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026779	Mastl	ENSMUST00000028119	ENSMUSP00000028119	TRANSLATION	protein_coding	-	CCDS15727.1	1	865	18	4.6	0.5	197.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075072	Olfr48	ENSMUST00000216674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075072	Olfr48	ENSMUST00000214428	ENSMUSP00000150505	TRANSLATION	protein_coding	-	CCDS16395.1	5	301	0	0.2	3.9	161.3	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075072	Olfr48	ENSMUST00000099762	ENSMUSP00000097350	TRANSLATION	protein_coding	-	CCDS16395.1	-	301	0	0.2	3.9	161.3	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000027201	Myef2	ENSMUST00000149911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027201	Myef2	ENSMUST00000142718	ENSMUSP00000115519	TRANSLATION	protein_coding	-	-	5	567	0	5.71	1	184.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027201	Myef2	ENSMUST00000110501	ENSMUSP00000106127	TRANSLATION	nonsense_mediated_decay	-	-	1	574	0	5.71	1.5	184.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027201	Myef2	ENSMUST00000089825	ENSMUSP00000087258	TRANSLATION	protein_coding	start	-	1	530	0	5.71	0	184.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027201	Myef2	ENSMUST00000152367	ENSMUSP00000123088	TRANSLATION	protein_coding	-	CCDS50691.1	1	591	0	5.71	1.5	184.1	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000027201	Myef2	ENSMUST00000137091	ENSMUSP00000123222	TRANSLATION	protein_coding	start/stop	-	1	446	0	4.21	0	116.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027201	Myef2	ENSMUST00000067780	ENSMUSP00000066312	TRANSLATION	protein_coding	-	CCDS50690.1	5	574	0	5.71	1.5	184.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027201	Myef2	ENSMUST00000129945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027201	Myef2	ENSMUST00000147105	ENSMUSP00000114817	TRANSLATION	protein_coding	-	CCDS50689.1	1	550	0	5.71	1.5	184.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027481	Bpifb2	ENSMUST00000129776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027481	Bpifb2	ENSMUST00000028983	ENSMUSP00000028983	TRANSLATION	protein_coding	-	CCDS16919.1	1	462	0	4.33	1.5	178.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000048550	Thnsl1	ENSMUST00000102951	ENSMUSP00000100016	TRANSLATION	protein_coding	-	CCDS15721.1	1	226	5	1.28	0.5	0	0	-4,-7	-	-	4.362	MINOR
ENSMUSG00000048550	Thnsl1	ENSMUST00000138965	ENSMUSP00000115186	TRANSLATION	protein_coding	stop	-	3	93	2	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048550	Thnsl1	ENSMUST00000102952	ENSMUSP00000100017	TRANSLATION	protein_coding	-	CCDS15721.1	1	226	5	1.28	0.5	0	0	-4,-7	-	-	4.362	MINOR
ENSMUSG00000048550	Thnsl1	ENSMUST00000054591	ENSMUSP00000052452	TRANSLATION	protein_coding	-	CCDS15720.1	1	747	17	1.76	0.5	177.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000048550	Thnsl1	ENSMUST00000138914	ENSMUSP00000119940	TRANSLATION	protein_coding	stop	-	3	35	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027649	Ctnnbl1	ENSMUST00000156300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027649	Ctnnbl1	ENSMUST00000129842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027649	Ctnnbl1	ENSMUST00000155479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027649	Ctnnbl1	ENSMUST00000029178	ENSMUSP00000029178	TRANSLATION	protein_coding	-	CCDS16982.1	1	563	0	13.83	8.4	138.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075145	Olfr1155	ENSMUST00000099843	ENSMUSP00000097431	TRANSLATION	protein_coding	-	CCDS16316.1	-	314	0	0.16	1.7	150.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075145	Olfr1155	ENSMUST00000215903	ENSMUSP00000149428	TRANSLATION	protein_coding	-	CCDS16316.1	5	314	0	0.16	1.7	150.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075145	Olfr1155	ENSMUST00000214641	ENSMUSP00000151048	TRANSLATION	protein_coding	-	CCDS16316.1	5	314	0	0.16	1.7	150.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026960	Arl6ip6	ENSMUST00000155517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026960	Arl6ip6	ENSMUST00000028336	ENSMUSP00000028336	TRANSLATION	protein_coding	-	CCDS16039.1	1	226	0	0	1.5	98.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000005804	Bloc1s6	ENSMUST00000129690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005804	Bloc1s6	ENSMUST00000148460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005804	Bloc1s6	ENSMUST00000146449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005804	Bloc1s6	ENSMUST00000145037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005804	Bloc1s6	ENSMUST00000127595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005804	Bloc1s6	ENSMUST00000005954	ENSMUSP00000005954	TRANSLATION	protein_coding	-	CCDS16668.1	1	172	0	0	5.3	77.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000078877	Gm14295	ENSMUST00000118012	ENSMUSP00000113133	TRANSLATION	protein_coding	-	CCDS57201.1	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	5.274	MINOR
ENSMUSG00000078877	Gm14295	ENSMUST00000179435	ENSMUSP00000136320	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078877	Gm14295	ENSMUST00000132883	ENSMUSP00000119262	TRANSLATION	protein_coding	-	-	5	834	106	1.65	0	645	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027652	Ralgapb	ENSMUST00000046274	ENSMUSP00000048430	TRANSLATION	protein_coding	-	-	5	1491	0	0	10.5	0	0	-4,-5	-	-	3	ALTERNATIVE:1
ENSMUSG00000027652	Ralgapb	ENSMUST00000150420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027652	Ralgapb	ENSMUST00000156281	ENSMUSP00000119595	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027652	Ralgapb	ENSMUST00000109486	ENSMUSP00000105112	TRANSLATION	protein_coding	-	CCDS71179.1	1	1495	0	0	10.5	0	0	-4,-5	-	-	3	ALTERNATIVE:1
ENSMUSG00000027652	Ralgapb	ENSMUST00000109485	ENSMUSP00000105111	TRANSLATION	protein_coding	-	CCDS71178.1	1	1507	0	0	7.3	0	0	-4,-5	-	-	1.989	PRINCIPAL:4
ENSMUSG00000027652	Ralgapb	ENSMUST00000173458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027652	Ralgapb	ENSMUST00000143394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027652	Ralgapb	ENSMUST00000150789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027652	Ralgapb	ENSMUST00000141497	ENSMUSP00000116481	TRANSLATION	protein_coding	start	-	5	1173	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027652	Ralgapb	ENSMUST00000173137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111747	Olfr1134	ENSMUST00000099857	ENSMUSP00000097443	TRANSLATION	protein_coding	-	CCDS16301.1	2	312	0	0.2	2.7	176.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000111747	Olfr1134	ENSMUST00000213939	ENSMUSP00000150358	TRANSLATION	protein_coding	-	CCDS16301.1	-	312	0	0.2	2.7	176.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000111747	Olfr1134	ENSMUST00000135875	ENSMUSP00000150837	TRANSLATION	protein_coding	-	CCDS16301.1	5	312	0	0.2	2.7	176.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026923	Notch1	ENSMUST00000123873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000129506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000138034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000028288	ENSMUSP00000028288	TRANSLATION	protein_coding	-	CCDS15806.1	1	2531	45	18.59	1.5	1305	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000026923	Notch1	ENSMUST00000132820	ENSMUSP00000115258	TRANSLATION	protein_coding	stop	-	1	92	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026923	Notch1	ENSMUST00000148948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000140082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000132941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000147481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026923	Notch1	ENSMUST00000131393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026923	Notch1	ENSMUST00000126872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027341	Tmem230	ENSMUST00000110164	ENSMUSP00000105793	TRANSLATION	protein_coding	-	CCDS16770.1	2	120	0	0	15	69.6	2	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000027341	Tmem230	ENSMUST00000110163	ENSMUSP00000105792	TRANSLATION	protein_coding	-	CCDS16770.1	3	120	0	0	15	69.6	2	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000027341	Tmem230	ENSMUST00000180286	ENSMUSP00000136826	TRANSLATION	protein_coding	-	CCDS16770.1	2	120	0	0	15	69.6	2	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000027341	Tmem230	ENSMUST00000143782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027341	Tmem230	ENSMUST00000141813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027341	Tmem230	ENSMUST00000028816	ENSMUSP00000028816	TRANSLATION	protein_coding	-	CCDS16770.1	1	120	0	0	15	69.6	2	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000062661	Ncs1	ENSMUST00000150670	ENSMUSP00000142269	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062661	Ncs1	ENSMUST00000000199	ENSMUSP00000000199	TRANSLATION	protein_coding	-	CCDS15896.1	1	190	23	5.58	18.3	91.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000078896	Zfp965	ENSMUST00000109043	ENSMUSP00000104671	TRANSLATION	protein_coding	-	-	5	138	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000078896	Zfp965	ENSMUST00000109002	ENSMUSP00000104630	TRANSLATION	protein_coding	-	CCDS79872.1	5	318	30	2.45	0.5	205.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078896	Zfp965	ENSMUST00000109042	ENSMUSP00000104670	TRANSLATION	protein_coding	-	-	1	83	0	1.45	0	71.2	0	-4,-6	-	-	3.552	MINOR
ENSMUSG00000078896	Zfp965	ENSMUST00000143490	ENSMUSP00000120552	TRANSLATION	protein_coding	-	-	5	98	0	1.45	0	71.2	0	-4,-6	-	-	3.552	MINOR
ENSMUSG00000062175	Tgif2	ENSMUST00000081335	ENSMUSP00000096745	TRANSLATION	protein_coding	-	CCDS16969.1	1	237	0	2	7.5	61.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062175	Tgif2	ENSMUST00000175634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062175	Tgif2	ENSMUST00000150078	ENSMUSP00000134959	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	1	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062175	Tgif2	ENSMUST00000176281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062175	Tgif2	ENSMUST00000073352	ENSMUSP00000073074	TRANSLATION	protein_coding	-	CCDS71173.1	1	198	0	2	1.5	61.7	0	-4,-5	-	-	12.231	MINOR
ENSMUSG00000027239	Mdk	ENSMUST00000111309	ENSMUSP00000106941	TRANSLATION	protein_coding	-	CCDS16440.1	2	140	0	2	0.5	181.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027239	Mdk	ENSMUST00000090602	ENSMUSP00000088090	TRANSLATION	protein_coding	-	CCDS16440.1	5	140	0	2	0.5	181.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027239	Mdk	ENSMUST00000069423	ENSMUSP00000068413	TRANSLATION	protein_coding	-	CCDS16440.1	1	140	0	2	0.5	181.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027239	Mdk	ENSMUST00000028672	ENSMUSP00000028672	TRANSLATION	protein_coding	-	CCDS16440.1	1	140	0	2	0.5	181.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000075078	Olfr1250	ENSMUST00000099768	ENSMUSP00000097356	TRANSLATION	protein_coding	-	CCDS16389.1	-	314	0	0.3	2.7	170.1	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075078	Olfr1250	ENSMUST00000111527	ENSMUSP00000107152	TRANSLATION	protein_coding	-	CCDS16389.1	2	314	0	0.3	2.7	170.1	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075078	Olfr1250	ENSMUST00000215730	ENSMUSP00000149720	TRANSLATION	protein_coding	-	CCDS16389.1	5	314	0	0.3	2.7	170.1	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035268	Pkig	ENSMUST00000147385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035268	Pkig	ENSMUST00000126182	ENSMUSP00000120145	TRANSLATION	protein_coding	-	CCDS17014.1	2	76	0	1.6	8.8	102.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035268	Pkig	ENSMUST00000109400	ENSMUSP00000105027	TRANSLATION	protein_coding	-	CCDS17014.1	1	76	0	1.6	8.8	102.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035268	Pkig	ENSMUST00000152418	ENSMUSP00000121956	TRANSLATION	protein_coding	stop	-	3	16	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035268	Pkig	ENSMUST00000164399	ENSMUSP00000126223	TRANSLATION	protein_coding	-	CCDS17014.1	2	76	0	1.6	8.8	102.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035268	Pkig	ENSMUST00000135537	ENSMUSP00000114291	TRANSLATION	protein_coding	stop	-	5	56	0	1.3	0	90.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035268	Pkig	ENSMUST00000099105	ENSMUSP00000096704	TRANSLATION	protein_coding	-	CCDS17014.1	2	76	0	1.6	8.8	102.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035268	Pkig	ENSMUST00000131228	ENSMUSP00000120355	TRANSLATION	protein_coding	stop	-	2	71	0	1.6	0	102.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035268	Pkig	ENSMUST00000064703	ENSMUSP00000068344	TRANSLATION	protein_coding	-	CCDS17014.1	1	76	0	1.6	8.8	102.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036731	Cysrt1	ENSMUST00000043379	ENSMUSP00000045363	TRANSLATION	protein_coding	-	CCDS50526.1	1	142	0	0	1.5	271.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036731	Cysrt1	ENSMUST00000114356	ENSMUSP00000109996	TRANSLATION	protein_coding	stop	-	5	114	0	0	0	196.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036731	Cysrt1	ENSMUST00000186719	ENSMUSP00000140416	TRANSLATION	protein_coding	-	CCDS50526.1	-	142	0	0	1.5	271.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037279	Ovol2	ENSMUST00000138582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037279	Ovol2	ENSMUST00000037423	ENSMUSP00000044026	TRANSLATION	protein_coding	-	CCDS16817.1	1	274	14	1.4	1.5	82.8	0	-4,-2	-	-	18	PRINCIPAL:4
ENSMUSG00000037279	Ovol2	ENSMUST00000103171	ENSMUSP00000099460	TRANSLATION	protein_coding	-	CCDS16818.1	1	241	14	1.4	1.5	82.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000003418	St8sia6	ENSMUST00000003509	ENSMUSP00000003509	TRANSLATION	protein_coding	-	CCDS15697.1	1	398	14	2.96	5.1	257.6	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000003418	St8sia6	ENSMUST00000150781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054484	Tmem62	ENSMUST00000123656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054484	Tmem62	ENSMUST00000147347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054484	Tmem62	ENSMUST00000135599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054484	Tmem62	ENSMUST00000110686	ENSMUSP00000106314	TRANSLATION	protein_coding	-	-	1	513	4	0	3.6	0	4	-4,-5	-	-	4.694	MINOR
ENSMUSG00000054484	Tmem62	ENSMUST00000067582	ENSMUSP00000064310	TRANSLATION	protein_coding	-	CCDS16629.1	1	643	7	0	5.1	39.1	4	2,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000054484	Tmem62	ENSMUST00000130010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054484	Tmem62	ENSMUST00000139428	ENSMUSP00000118808	TRANSLATION	nonsense_mediated_decay	-	-	1	333	7	0	0	39.1	0	2,-1	-	-	-1	MINOR
ENSMUSG00000062646	Ganc	ENSMUST00000136993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000154435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000043755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000153660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000154404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000154574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000145134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000152437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000131523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000135074	ENSMUSP00000116898	TRANSLATION	protein_coding	-	CCDS38211.1	2	913	0	18.99	3.9	567	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062646	Ganc	ENSMUST00000154963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000132835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062646	Ganc	ENSMUST00000143409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062646	Ganc	ENSMUST00000127367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098794	Gm28038	ENSMUST00000143119	ENSMUSP00000125607	TRANSLATION	protein_coding,RT	start/stop	-	5	126	0	3.75	0	36.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027375	Mal	ENSMUST00000028854	ENSMUSP00000028854	TRANSLATION	protein_coding	-	CCDS16707.1	1	153	0	0	6.3	53.7	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027375	Mal	ENSMUST00000028853	ENSMUSP00000028853	TRANSLATION	protein_coding	-	CCDS50705.1	1	97	0	0	1.7	0	3	-4,-7	-	-	0.264	MINOR
ENSMUSG00000068129	Cst7	ENSMUST00000089200	ENSMUSP00000086606	TRANSLATION	protein_coding	-	CCDS16857.2	1	144	0	2.75	0.5	56.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000074771	Ankef1	ENSMUST00000154394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074771	Ankef1	ENSMUST00000150189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074771	Ankef1	ENSMUST00000149712	ENSMUSP00000114440	TRANSLATION	nonsense_mediated_decay	-	-	2	183	0	1.44	0	37.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074771	Ankef1	ENSMUST00000028726	ENSMUSP00000028726	TRANSLATION	nonsense_mediated_decay	-	-	1	775	0	5.34	7.5	117.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074771	Ankef1	ENSMUST00000138967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074771	Ankef1	ENSMUST00000154343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074771	Ankef1	ENSMUST00000180246	ENSMUSP00000135947	TRANSLATION	protein_coding	-	CCDS38249.1	5	775	0	5.34	7.5	117.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074771	Ankef1	ENSMUST00000131970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074771	Ankef1	ENSMUST00000121717	ENSMUSP00000113881	TRANSLATION	protein_coding	-	CCDS38249.1	1	775	0	5.34	7.5	117.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074771	Ankef1	ENSMUST00000123214	ENSMUSP00000120000	TRANSLATION	protein_coding	stop	-	1	413	0	3.4	0	72	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002103	Acp2	ENSMUST00000239169	ENSMUSP00000159053	TRANSLATION	protein_coding	-	CCDS16427.1	-	423	6	9.1	7.5	115	1	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000002103	Acp2	ENSMUST00000124131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002103	Acp2	ENSMUST00000002172	ENSMUSP00000002172	TRANSLATION	protein_coding	-	CCDS16427.1	1	423	6	9.1	7.5	115	1	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000002103	Acp2	ENSMUST00000155418	ENSMUSP00000116030	TRANSLATION	protein_coding	stop	-	3	166	4	3.45	0	63.6	0	1,-3	-	-	-1	MINOR
ENSMUSG00000002103	Acp2	ENSMUST00000127643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002103	Acp2	ENSMUST00000238832	ENSMUSP00000159089	TRANSLATION	protein_coding	-	-	-	434	6	9.1	2.4	115	1	1,-4	-	-	18.645	MINOR
ENSMUSG00000002103	Acp2	ENSMUST00000150403	ENSMUSP00000119144	TRANSLATION	protein_coding	stop	-	5	305	6	7	0	102.1	0	1,-4	-	-	-1	MINOR
ENSMUSG00000050530	Fam171a1	ENSMUST00000072955	ENSMUSP00000072724	TRANSLATION	protein_coding	-	CCDS79727.1	1	767	0	0	1.5	1085.1	1	-4,-7	-	-	0	MINOR
ENSMUSG00000050530	Fam171a1	ENSMUST00000091505	ENSMUSP00000089086	TRANSLATION	protein_coding	-	-	1	294	0	0	0	457.4	0	1,-2	-	-	0	MINOR
ENSMUSG00000050530	Fam171a1	ENSMUST00000062934	ENSMUSP00000053619	TRANSLATION	protein_coding	-	CCDS84464.1	1	887	0	0	0.5	1260.6	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000050530	Fam171a1	ENSMUST00000115099	ENSMUSP00000110751	TRANSLATION	protein_coding	-	CCDS38036.1	1	892	0	0	0.5	1260.6	1	1,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000039117	Taf4	ENSMUST00000227325	ENSMUSP00000153863	TRANSLATION	protein_coding	-	-	-	1030	0	5.6	0	394.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039117	Taf4	ENSMUST00000041618	ENSMUSP00000038610	TRANSLATION	protein_coding	-	CCDS38373.1	1	1042	0	5.6	0.5	394.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000039117	Taf4	ENSMUST00000154961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039117	Taf4	ENSMUST00000155335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000129626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000128936	ENSMUSP00000121664	TRANSLATION	protein_coding	start/stop	-	3	232	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039262	Prrc2b	ENSMUST00000140015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000036691	ENSMUSP00000035734	TRANSLATION	protein_coding	-	CCDS15907.1	1	1486	0	0	0.5	222.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000039262	Prrc2b	ENSMUST00000123270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000156313	ENSMUSP00000114994	TRANSLATION	protein_coding	start/stop	-	3	250	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039262	Prrc2b	ENSMUST00000141053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000142219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039262	Prrc2b	ENSMUST00000132459	ENSMUSP00000116429	TRANSLATION	protein_coding	start	-	1	1472	0	0	0	86.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039262	Prrc2b	ENSMUST00000069817	ENSMUSP00000064892	TRANSLATION	protein_coding	-	CCDS50565.1	1	2230	0	0	0.5	222.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027423	Snx5	ENSMUST00000155509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027423	Snx5	ENSMUST00000124389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027423	Snx5	ENSMUST00000110030	ENSMUSP00000105657	TRANSLATION	protein_coding	-	CCDS16815.1	1	404	0	4.6	8.8	132.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027423	Snx5	ENSMUST00000156936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027423	Snx5	ENSMUST00000028909	ENSMUSP00000028909	TRANSLATION	protein_coding	-	CCDS16815.1	1	404	0	4.6	8.8	132.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027423	Snx5	ENSMUST00000125285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027423	Snx5	ENSMUST00000153033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027423	Snx5	ENSMUST00000138745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027656	Ccn5	ENSMUST00000138730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027656	Ccn5	ENSMUST00000029188	ENSMUSP00000029188	TRANSLATION	protein_coding	-	CCDS17016.1	1	251	0	0	1.5	77.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000016921	Srsf6	ENSMUST00000126163	ENSMUSP00000141349	TRANSLATION	protein_coding	-	-	5	135	0	2	1.2	60.6	0	-4,-7	-	-	5.79	MINOR
ENSMUSG00000016921	Srsf6	ENSMUST00000017065	ENSMUSP00000142183	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	2	1.2	60.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016921	Srsf6	ENSMUST00000193611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016921	Srsf6	ENSMUST00000130411	ENSMUSP00000119065	TRANSLATION	protein_coding	-	CCDS17002.1	1	339	0	3.6	1.5	110.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049897	Stkld1	ENSMUST00000055406	ENSMUSP00000062967	TRANSLATION	protein_coding	-	CCDS15818.1	1	662	0	4.998	0.5	115.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049897	Stkld1	ENSMUST00000153771	ENSMUSP00000121332	TRANSLATION	protein_coding	stop	-	5	116	0	2.1	0	21.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070531	Wfdc6b	ENSMUST00000094346	ENSMUSP00000091906	TRANSLATION	protein_coding	-	CCDS17046.2	1	148	0	1	0.5	101.3	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038740	Mvb12b	ENSMUST00000195203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038740	Mvb12b	ENSMUST00000041555	ENSMUSP00000048901	TRANSLATION	protein_coding	-	CCDS15946.1	1	317	0	4.6	6.3	282.3	0	-4,-2	-	-	13.598	PRINCIPAL:1
ENSMUSG00000038740	Mvb12b	ENSMUST00000192765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038740	Mvb12b	ENSMUST00000146892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038740	Mvb12b	ENSMUST00000148660	ENSMUSP00000115744	TRANSLATION	protein_coding	stop	-	3	189	0	4.8	0	215.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026888	Grb14	ENSMUST00000134020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026888	Grb14	ENSMUST00000150643	ENSMUSP00000121571	TRANSLATION	protein_coding	start	-	3	93	0	2.75	0	102.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026888	Grb14	ENSMUST00000146807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026888	Grb14	ENSMUST00000156765	ENSMUSP00000121001	TRANSLATION	protein_coding	stop	-	5	221	0	5.2	0	84.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026888	Grb14	ENSMUST00000137085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026888	Grb14	ENSMUST00000145603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026888	Grb14	ENSMUST00000028252	ENSMUSP00000028252	TRANSLATION	protein_coding	-	CCDS16071.1	1	538	0	11.25	6.3	259.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026888	Grb14	ENSMUST00000149193	ENSMUSP00000118115	TRANSLATION	protein_coding	start	-	5	109	0	3.264	0	84.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079277	Hoxd3	ENSMUST00000140666	ENSMUSP00000134616	TRANSLATION	protein_coding	stop	-	3	113	0	1	0	77	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079277	Hoxd3	ENSMUST00000144544	ENSMUSP00000134633	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079277	Hoxd3	ENSMUST00000111983	ENSMUSP00000107614	TRANSLATION	protein_coding	-	CCDS38149.1	1	433	0	1	8.8	182.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079277	Hoxd3	ENSMUST00000190553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079277	Hoxd3	ENSMUST00000047830	ENSMUSP00000044809	TRANSLATION	protein_coding	-	CCDS38149.1	5	433	0	1	8.8	182.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079277	Hoxd3	ENSMUST00000111982	ENSMUSP00000107613	TRANSLATION	protein_coding	-	CCDS38149.1	1	433	0	1	8.8	182.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079110	Capn3	ENSMUST00000141181	ENSMUSP00000159281	TRANSLATION	protein_coding	-	-	3	191	23	5.91	0	75.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000090028	ENSMUSP00000087482	TRANSLATION	protein_coding	-	-	5	737	32	15.965	0	714.7	0	-4,-7	-	-	11.478	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000151342	ENSMUSP00000159249	TRANSLATION	protein_coding	stop	-	2	136	15	4.08	0	61	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000239364	ENSMUSP00000159260	TRANSLATION	protein_coding	-	-	-	815	32	15.72	6	791.9	0	-4,-6	-	-	17.925	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000110721	ENSMUSP00000106349	TRANSLATION	protein_coding	-	CCDS50679.1	1	729	32	16.14	6.5	721.5	0	-4,-6	-	-	14.772	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000151924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079110	Capn3	ENSMUST00000110719	ENSMUSP00000106347	TRANSLATION	protein_coding	-	-	5	785	32	15.465	1	706.7	0	-4,-7	-	-	10.248	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000028748	ENSMUSP00000028748	TRANSLATION	protein_coding	-	CCDS50680.1	1	709	32	16.34	1.7	717.6	0	-4,-7	-	-	12.726	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000110716	ENSMUSP00000106344	TRANSLATION	protein_coding	-	-	5	757	32	15.84	1	709.6	0	-4,-7	-	-	10.998	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000239291	ENSMUSP00000159220	TRANSLATION	nonsense_mediated_decay	start	-	-	178	0	2.38	0	205	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000139336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079110	Capn3	ENSMUST00000125238	ENSMUSP00000159219	TRANSLATION	protein_coding	-	-	3	156	18	4.91	2.4	75.7	0	-4,-5	-	-	0.645	MINOR
ENSMUSG00000079110	Capn3	ENSMUST00000028749	ENSMUSP00000028749	TRANSLATION	protein_coding	-	CCDS16620.1	1	821	32	15.72	7.5	810.9	0	-4,-6	-	-	19.758	PRINCIPAL:1
ENSMUSG00000079110	Capn3	ENSMUST00000239355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075140	Olfr73	ENSMUST00000129056	ENSMUSP00000149472	TRANSLATION	protein_coding	-	CCDS16322.1	2	313	0	0.16	7.6	162.1	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075140	Olfr73	ENSMUST00000099838	ENSMUSP00000097426	TRANSLATION	protein_coding	-	CCDS16322.1	-	313	0	0.16	7.6	162.1	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075155	Olfr1133	ENSMUST00000099855	ENSMUSP00000097441	TRANSLATION	protein_coding	-	CCDS16300.1	-	313	0	0	2.7	171.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075155	Olfr1133	ENSMUST00000217368	ENSMUSP00000149460	TRANSLATION	protein_coding	-	CCDS16300.1	5	313	0	0	2.7	171.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045794	Lkaaear1	ENSMUST00000132409	ENSMUSP00000116083	TRANSLATION	protein_coding	start	-	5	115	0	0	0	104.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045794	Lkaaear1	ENSMUST00000052416	ENSMUSP00000061134	TRANSLATION	protein_coding	-	CCDS17221.1	1	198	0	0	0.5	175.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025716	Myo3a	ENSMUST00000142435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025716	Myo3a	ENSMUST00000138850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025716	Myo3a	ENSMUST00000138863	ENSMUSP00000116185	TRANSLATION	protein_coding	start	-	5	683	0	2.72	0	113.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025716	Myo3a	ENSMUST00000044749	ENSMUSP00000046329	TRANSLATION	protein_coding	-	CCDS84477.1	5	1621	35	21.01	1.5	900.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025716	Myo3a	ENSMUST00000153002	ENSMUSP00000120573	TRANSLATION	protein_coding	stop	-	5	753	35	15.27	0	643	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025716	Myo3a	ENSMUST00000149423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000128130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000128401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000135752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000139635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000136710	ENSMUSP00000121599	TRANSLATION	protein_coding	stop	-	5	363	9	2.66	0	52.9	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000052406	Rexo4	ENSMUST00000114020	ENSMUSP00000109653	TRANSLATION	protein_coding	-	CCDS15819.1	1	432	9	3.26	0.5	70.5	0	-1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000052406	Rexo4	ENSMUST00000145546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052406	Rexo4	ENSMUST00000064244	ENSMUSP00000070815	TRANSLATION	protein_coding	-	-	1	409	9	3.26	0	70.5	0	-3,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052406	Rexo4	ENSMUST00000123126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078887	Gm6710	ENSMUST00000109012	ENSMUSP00000104640	TRANSLATION	protein_coding	-	CCDS50823.1	5	554	67	2.05	0.5	431.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078887	Gm6710	ENSMUST00000109011	ENSMUSP00000104639	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	80.1	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078887	Gm6710	ENSMUST00000149549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078887	Gm6710	ENSMUST00000147820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026966	Ssna1	ENSMUST00000127176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026966	Ssna1	ENSMUST00000141470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026966	Ssna1	ENSMUST00000028342	ENSMUSP00000028342	TRANSLATION	protein_coding	-	CCDS38071.1	1	119	0	0	8.8	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000026966	Ssna1	ENSMUST00000133697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000139480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000184371	ENSMUSP00000139274	TRANSLATION	nonsense_mediated_decay	-	-	5	1022	10	19.105	0	502.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039943	Plcb4	ENSMUST00000147744	ENSMUSP00000117578	TRANSLATION	protein_coding	start	-	1	255	0	2.109	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039943	Plcb4	ENSMUST00000137969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039943	Plcb4	ENSMUST00000141025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000134310	ENSMUSP00000117638	TRANSLATION	protein_coding	stop	-	1	883	10	18.19	0	437.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039943	Plcb4	ENSMUST00000110109	ENSMUSP00000105736	TRANSLATION	protein_coding	-	CCDS16788.1	1	1175	10	20.679	7.2	502.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039943	Plcb4	ENSMUST00000127044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000132686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000147122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000035646	ENSMUSP00000038409	TRANSLATION	protein_coding	-	CCDS16788.1	5	1175	10	20.679	7.2	502.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039943	Plcb4	ENSMUST00000146018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039943	Plcb4	ENSMUST00000150072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000127729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039943	Plcb4	ENSMUST00000144931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035183	Slc24a5	ENSMUST00000139615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035183	Slc24a5	ENSMUST00000149963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035183	Slc24a5	ENSMUST00000070353	ENSMUSP00000063887	TRANSLATION	protein_coding	-	CCDS38226.1	1	501	5	1	0.5	177.8	0	2,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000044641	Pard6b	ENSMUST00000052125	ENSMUSP00000052619	TRANSLATION	protein_coding	-	CCDS17108.1	1	371	0	2.45	1.5	101.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000068205	Macrod2	ENSMUST00000110063	ENSMUSP00000105690	TRANSLATION	protein_coding	-	-	5	125	1	2.7	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068205	Macrod2	ENSMUST00000043836	ENSMUSP00000041780	TRANSLATION	protein_coding	-	CCDS16805.1	1	114	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068205	Macrod2	ENSMUST00000110061	ENSMUSP00000105688	TRANSLATION	protein_coding	-	-	1	77	0	1.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068205	Macrod2	ENSMUST00000139039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068205	Macrod2	ENSMUST00000124403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068205	Macrod2	ENSMUST00000110067	ENSMUSP00000105694	TRANSLATION	protein_coding	-	-	5	423	14	6.66	0	139.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000068205	Macrod2	ENSMUST00000138786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068205	Macrod2	ENSMUST00000156619	ENSMUSP00000121013	TRANSLATION	protein_coding	start	-	5	75	1	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068205	Macrod2	ENSMUST00000110064	ENSMUSP00000105691	TRANSLATION	protein_coding	-	CCDS50733.1	1	475	14	6.66	1.7	139.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000068205	Macrod2	ENSMUST00000138485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068205	Macrod2	ENSMUST00000110062	ENSMUSP00000105689	TRANSLATION	protein_coding	-	-	1	77	0	1.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068205	Macrod2	ENSMUST00000154505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068205	Macrod2	ENSMUST00000078027	ENSMUSP00000077174	TRANSLATION	protein_coding	-	CCDS50733.1	5	475	14	6.66	1.7	139.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000068205	Macrod2	ENSMUST00000150460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026655	Fam107b	ENSMUST00000177125	ENSMUSP00000135757	TRANSLATION	nonsense_mediated_decay	-	-	2	48	0	0	2	53	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026655	Fam107b	ENSMUST00000177037	ENSMUSP00000135325	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	44.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026655	Fam107b	ENSMUST00000176254	ENSMUSP00000135846	TRANSLATION	protein_coding	-	-	5	75	0	0	0	58.7	0	-4,-5	-	-	0.984	MINOR
ENSMUSG00000026655	Fam107b	ENSMUST00000115054	ENSMUSP00000110706	TRANSLATION	protein_coding	-	CCDS15655.1	3	131	0	0	15	142.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026655	Fam107b	ENSMUST00000115055	ENSMUSP00000110707	TRANSLATION	protein_coding	-	CCDS15655.1	2	131	0	0	15	142.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026655	Fam107b	ENSMUST00000226435	ENSMUSP00000154419	TRANSLATION	protein_coding	-	-	-	307	0	0	2.4	142.3	0	-4,0	-	-	6.4	MINOR
ENSMUSG00000026655	Fam107b	ENSMUST00000027965	ENSMUSP00000027965	TRANSLATION	protein_coding	-	CCDS15655.1	1	131	0	0	15	142.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026655	Fam107b	ENSMUST00000115053	ENSMUSP00000110705	TRANSLATION	protein_coding	-	CCDS15655.1	3	131	0	0	15	142.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000026655	Fam107b	ENSMUST00000115052	ENSMUSP00000110704	TRANSLATION	protein_coding	-	-	3	153	0	0	1.2	142.3	0	-4,-5	-	-	6.056	MINOR
ENSMUSG00000054057	A930004D18Rik	ENSMUST00000151857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054057	A930004D18Rik	ENSMUST00000066163	ENSMUSP00000066378	TRANSLATION	protein_coding	-	-	1	157	0	0	0	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000054057	A930004D18Rik	ENSMUST00000135980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055088	Olfr354	ENSMUST00000217479	ENSMUSP00000149298	TRANSLATION	protein_coding	-	CCDS15987.1	5	317	0	0.28	4	209.5	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000055088	Olfr354	ENSMUST00000218102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055088	Olfr354	ENSMUST00000068475	ENSMUSP00000068986	TRANSLATION	protein_coding	-	CCDS15987.1	-	317	0	0.28	4	209.5	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000042631	Xkr7	ENSMUST00000037235	ENSMUSP00000049346	TRANSLATION	protein_coding	-	CCDS16905.1	1	580	0	0	5.1	407.8	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000027399	Il1a	ENSMUST00000028882	ENSMUSP00000028882	TRANSLATION	protein_coding	-	CCDS16725.1	1	270	0	2.6	1.5	250.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027282	Mtch2	ENSMUST00000111467	ENSMUSP00000107092	TRANSLATION	protein_coding	-	CCDS84548.1	5	294	0	0	4.1	38	0	-4,-7	-	-	7.431	MINOR
ENSMUSG00000027282	Mtch2	ENSMUST00000135026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027282	Mtch2	ENSMUST00000148936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027282	Mtch2	ENSMUST00000142350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027282	Mtch2	ENSMUST00000143773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027282	Mtch2	ENSMUST00000111468	ENSMUSP00000107093	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027282	Mtch2	ENSMUST00000057216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027282	Mtch2	ENSMUST00000144696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027282	Mtch2	ENSMUST00000150232	ENSMUSP00000118566	TRANSLATION	protein_coding	-	CCDS84547.1	1	312	0	0	0.5	38	0	-4,-7	-	-	6	MINOR
ENSMUSG00000027282	Mtch2	ENSMUST00000136872	ENSMUSP00000121851	TRANSLATION	protein_coding	-	CCDS16416.1	1	303	0	0	7.5	38	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000027282	Mtch2	ENSMUST00000146392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027273	Snap25	ENSMUST00000110098	ENSMUSP00000105725	TRANSLATION	protein_coding	-	CCDS71153.1	3	206	0	5.5	19.5	74.7	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000027273	Snap25	ENSMUST00000125486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027273	Snap25	ENSMUST00000028727	ENSMUSP00000028727	TRANSLATION	protein_coding	-	CCDS16793.1	1	206	0	5.5	19.5	74.7	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000017734	Dbndd2	ENSMUST00000109350	ENSMUSP00000104974	TRANSLATION	protein_coding	-	CCDS38322.1	2	158	0	0	5.1	106.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000017734	Dbndd2	ENSMUST00000109349	ENSMUSP00000104973	TRANSLATION	protein_coding	-	CCDS38322.1	1	158	0	0	5.1	106.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000017734	Dbndd2	ENSMUST00000017878	ENSMUSP00000017878	TRANSLATION	protein_coding	-	CCDS38322.1	2	158	0	0	5.1	106.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000017734	Dbndd2	ENSMUST00000149287	ENSMUSP00000128551	TRANSLATION	nonsense_mediated_decay	-	-	1	158	0	0	5.1	106.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017734	Dbndd2	ENSMUST00000143690	ENSMUSP00000122187	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	100	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017734	Dbndd2	ENSMUST00000069385	ENSMUSP00000064437	TRANSLATION	protein_coding	-	CCDS38322.1	1	158	0	0	5.1	106.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000016344	Ppdpf	ENSMUST00000135011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016344	Ppdpf	ENSMUST00000146089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016344	Ppdpf	ENSMUST00000016488	ENSMUSP00000016488	TRANSLATION	protein_coding	-	CCDS17202.1	1	115	0	0	1.5	175	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000016344	Ppdpf	ENSMUST00000138800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016344	Ppdpf	ENSMUST00000108841	ENSMUSP00000104469	TRANSLATION	protein_coding	-	CCDS17202.1	1	115	0	0	1.5	175	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000016344	Ppdpf	ENSMUST00000127971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026643	Nmt2	ENSMUST00000091504	ENSMUSP00000089085	TRANSLATION	protein_coding	-	CCDS70972.1	5	485	36	9.63	2.9	527.3	0	-4,-5	-	-	17.376	MINOR
ENSMUSG00000026643	Nmt2	ENSMUST00000081932	ENSMUSP00000080600	TRANSLATION	protein_coding	-	CCDS15644.1	1	529	36	9.734	1.5	527.3	0	-4,-5	-	-	17.151	MINOR
ENSMUSG00000026643	Nmt2	ENSMUST00000102989	ENSMUSP00000100054	TRANSLATION	protein_coding	-	CCDS70971.1	5	498	36	10.234	10.8	527.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026643	Nmt2	ENSMUST00000155761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075520	Malrd1	ENSMUST00000146205	ENSMUSP00000116869	TRANSLATION	protein_coding	-	CCDS79736.1	1	2123	30	3.52	0.5	1014.4	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000027581	Stmn3	ENSMUST00000103045	ENSMUSP00000099334	TRANSLATION	protein_coding	-	CCDS17207.1	1	180	0	2.3	13.6	183.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036067	Slc2a6	ENSMUST00000135725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036067	Slc2a6	ENSMUST00000145742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036067	Slc2a6	ENSMUST00000153388	ENSMUSP00000122054	TRANSLATION	protein_coding	stop	-	5	85	0	0.48	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000036067	Slc2a6	ENSMUST00000045702	ENSMUSP00000049103	TRANSLATION	protein_coding	-	CCDS15822.1	1	497	0	6.25	0.5	285.8	19	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036067	Slc2a6	ENSMUST00000129835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036067	Slc2a6	ENSMUST00000102890	ENSMUSP00000099954	TRANSLATION	protein_coding	-	CCDS50544.1	1	443	0	6.21	4.1	198.1	18	-4,-5	-	-	7.66	MINOR
ENSMUSG00000026669	Mcm10	ENSMUST00000146257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000027980	ENSMUSP00000027980	TRANSLATION	protein_coding	-	CCDS15662.1	1	885	4	6.55	0.5	542	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026669	Mcm10	ENSMUST00000151533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000150091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000102985	ENSMUSP00000100050	TRANSLATION	protein_coding	-	CCDS15662.1	1	885	4	6.55	0.5	542	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026669	Mcm10	ENSMUST00000125349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000139882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000125201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026669	Mcm10	ENSMUST00000129443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026669	Mcm10	ENSMUST00000125851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032715	Trib3	ENSMUST00000124995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032715	Trib3	ENSMUST00000123145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032715	Trib3	ENSMUST00000040312	ENSMUSP00000041747	TRANSLATION	protein_coding	-	CCDS16881.1	1	354	0	2.32	0.5	90.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023210	Lcn9	ENSMUST00000023978	ENSMUSP00000023978	TRANSLATION	protein_coding	-	CCDS15792.1	1	178	0	4.35	0.5	119.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040794	C1qtnf4	ENSMUST00000111466	ENSMUSP00000107091	TRANSLATION	protein_coding	-	CCDS16417.2	1	326	0	0.42	0.5	238.3	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000040133	Gpr176	ENSMUST00000039160	ENSMUSP00000037586	TRANSLATION	protein_coding	-	CCDS16575.1	1	515	0	1.2	7.5	101.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000036587	Fut7	ENSMUST00000114278	ENSMUSP00000109917	TRANSLATION	protein_coding	-	CCDS15772.1	1	342	9	0	2.7	309	2	-2,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000036587	Fut7	ENSMUST00000142156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036587	Fut7	ENSMUST00000134259	ENSMUSP00000123526	TRANSLATION	protein_coding	stop	-	1	103	0	0	0	43.9	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000036587	Fut7	ENSMUST00000100320	ENSMUSP00000097895	TRANSLATION	protein_coding	-	CCDS50530.1	1	389	9	0	0.5	309	2	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036587	Fut7	ENSMUST00000041654	ENSMUSP00000039985	TRANSLATION	protein_coding	-	CCDS15772.1	5	342	9	0	2.7	309	2	-2,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000055177	Cstl1	ENSMUST00000109952	ENSMUSP00000105578	TRANSLATION	protein_coding	-	CCDS16844.1	5	140	0	2.5	1.5	56.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055177	Cstl1	ENSMUST00000109955	ENSMUSP00000105581	TRANSLATION	protein_coding	-	CCDS16844.1	1	140	0	2.5	1.5	56.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055177	Cstl1	ENSMUST00000109954	ENSMUSP00000105580	TRANSLATION	protein_coding	-	-	1	88	0	1.9	0	30.1	0	2,-3	-	-	7.752	MINOR
ENSMUSG00000075467	Dnlz	ENSMUST00000125848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075467	Dnlz	ENSMUST00000028295	ENSMUSP00000028295	TRANSLATION	protein_coding	-	CCDS38083.1	1	177	4	1.2	1.5	105.2	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000027366	Sppl2a	ENSMUST00000125592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027366	Sppl2a	ENSMUST00000028844	ENSMUSP00000028844	TRANSLATION	protein_coding	-	CCDS16690.1	1	523	0	0	1.5	299.7	8	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027366	Sppl2a	ENSMUST00000143700	ENSMUSP00000119064	TRANSLATION	protein_coding	start/stop	-	5	253	0	0	0	236.2	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000026894	Morn5	ENSMUST00000028256	ENSMUSP00000028256	TRANSLATION	protein_coding	-	CCDS15968.1	1	170	0	0	0.5	51.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074665	Bpifb4	ENSMUST00000109757	ENSMUSP00000105379	TRANSLATION	protein_coding	-	CCDS16922.2	5	617	0	5.26	1.5	201.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000074665	Bpifb4	ENSMUST00000154281	ENSMUSP00000159206	TRANSLATION	protein_coding	-	-	5	829	0	5.26	0	201.7	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000074665	Bpifb4	ENSMUST00000099181	ENSMUSP00000096786	TRANSLATION	protein_coding	-	-	1	403	0	5.26	0	193.7	0	-2,1	-	-	11.52	ALTERNATIVE:2
ENSMUSG00000074665	Bpifb4	ENSMUST00000109759	ENSMUSP00000105381	TRANSLATION	protein_coding	-	CCDS16922.2	5	617	0	5.26	1.5	201.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000027068	Dhrs9	ENSMUST00000063690	ENSMUSP00000069631	TRANSLATION	protein_coding	-	CCDS16091.1	1	319	27	2.2	4.1	136.4	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000005803	Sqor	ENSMUST00000176999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005803	Sqor	ENSMUST00000147475	ENSMUSP00000135045	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000005803	Sqor	ENSMUST00000176343	ENSMUSP00000135786	TRANSLATION	protein_coding	start	-	5	193	8	1.198	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005803	Sqor	ENSMUST00000005953	ENSMUSP00000005953	TRANSLATION	protein_coding	-	CCDS16669.1	1	450	34	3.658	8.8	0	0	-2,2	-	-	15	PRINCIPAL:1
ENSMUSG00000005803	Sqor	ENSMUST00000110506	ENSMUSP00000106133	TRANSLATION	protein_coding	-	CCDS16669.1	1	450	34	3.658	8.8	0	0	-2,2	-	-	15	PRINCIPAL:1
ENSMUSG00000005803	Sqor	ENSMUST00000141698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005803	Sqor	ENSMUST00000124460	ENSMUSP00000135012	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000005803	Sqor	ENSMUST00000126403	ENSMUSP00000117575	TRANSLATION	nonsense_mediated_decay	-	-	5	300	26	2.86	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000005803	Sqor	ENSMUST00000147310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042863	Olfr1026	ENSMUST00000056718	ENSMUSP00000049887	TRANSLATION	protein_coding	-	CCDS16228.1	-	307	0	0.36	3.9	194.9	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000042863	Olfr1026	ENSMUST00000217615	ENSMUSP00000150995	TRANSLATION	protein_coding	-	CCDS16228.1	5	307	0	0.36	3.9	194.9	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000042863	Olfr1026	ENSMUST00000219615	ENSMUSP00000151927	TRANSLATION	protein_coding	-	CCDS16228.1	5	307	0	0.36	3.9	194.9	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000059112	Olfr1263	ENSMUST00000111507	ENSMUSP00000107132	TRANSLATION	protein_coding	-	CCDS16402.1	-	306	0	0.16	5.1	142.1	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000059112	Olfr1263	ENSMUST00000214382	ENSMUSP00000149887	TRANSLATION	protein_coding	-	CCDS16402.1	5	306	0	0.16	5.1	142.1	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000059112	Olfr1263	ENSMUST00000216764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059112	Olfr1263	ENSMUST00000217065	ENSMUSP00000150959	TRANSLATION	protein_coding	-	CCDS16402.1	5	306	0	0.16	5.1	142.1	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000050043	Tmx2	ENSMUST00000111665	ENSMUSP00000107294	TRANSLATION	protein_coding	-	CCDS16188.1	1	295	0	4.1	8.3	43.8	1	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000050043	Tmx2	ENSMUST00000138529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050043	Tmx2	ENSMUST00000111664	ENSMUSP00000107293	TRANSLATION	protein_coding	-	CCDS71087.1	3	257	0	4.1	1.7	43.8	1	-2,-3	-	-	12.288	MINOR
ENSMUSG00000050043	Tmx2	ENSMUST00000152149	ENSMUSP00000115745	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	0	1	-2,-4	-	-	-1	MINOR
ENSMUSG00000050043	Tmx2	ENSMUST00000123772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050043	Tmx2	ENSMUST00000053664	ENSMUSP00000059582	TRANSLATION	protein_coding	-	CCDS16188.1	1	295	0	4.1	8.3	43.8	1	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000034723	Tmx4	ENSMUST00000038228	ENSMUSP00000045154	TRANSLATION	protein_coding	-	CCDS16784.1	1	335	8	2.9	0.5	47.7	0	3,-2	-	-	17.802	PRINCIPAL:2
ENSMUSG00000034723	Tmx4	ENSMUST00000137377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034723	Tmx4	ENSMUST00000110119	ENSMUSP00000105746	TRANSLATION	protein_coding	-	-	2	166	5	1.4	0	36.2	0	3,-2	-	-	11.106	MINOR
ENSMUSG00000034723	Tmx4	ENSMUST00000110120	ENSMUSP00000105747	TRANSLATION	protein_coding	-	-	1	183	8	3	0	47.7	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000074743	Thbd	ENSMUST00000099270	ENSMUSP00000096877	TRANSLATION	protein_coding	-	CCDS16838.1	-	577	8	0.2	1.5	155.6	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000026933	Camsap1	ENSMUST00000134054	ENSMUSP00000121689	TRANSLATION	protein_coding	start/stop	-	3	265	0	0	0	122.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000091268	ENSMUSP00000088812	TRANSLATION	protein_coding	-	-	5	1581	0	2	1.5	385.8	0	-4,-5	-	-	11.526	ALTERNATIVE:2
ENSMUSG00000026933	Camsap1	ENSMUST00000127823	ENSMUSP00000138910	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000134970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026933	Camsap1	ENSMUST00000139937	ENSMUSP00000139305	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000142028	ENSMUSP00000119296	TRANSLATION	protein_coding	start/stop	-	5	164	0	0	0	90.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000143977	ENSMUSP00000139100	TRANSLATION	nonsense_mediated_decay	start	-	5	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000148146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026933	Camsap1	ENSMUST00000151593	ENSMUSP00000123541	TRANSLATION	protein_coding	start/stop	-	5	177	0	0	0	122.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026933	Camsap1	ENSMUST00000183461	ENSMUSP00000139028	TRANSLATION	protein_coding	-	-	5	1581	0	2	1.5	385.8	0	-4,-5	-	-	11.526	ALTERNATIVE:2
ENSMUSG00000026933	Camsap1	ENSMUST00000114167	ENSMUSP00000109804	TRANSLATION	protein_coding	-	CCDS50538.2	5	1582	0	2	1.5	393.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000026933	Camsap1	ENSMUST00000134882	ENSMUSP00000117203	TRANSLATION	protein_coding	stop	-	5	1077	0	0	0	209.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027646	Src	ENSMUST00000133900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027646	Src	ENSMUST00000145715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027646	Src	ENSMUST00000109533	ENSMUSP00000105159	TRANSLATION	protein_coding	-	CCDS16978.1	1	535	19	10.75	10.4	466.2	0	-4,-6	-	-	21	PRINCIPAL:3
ENSMUSG00000027646	Src	ENSMUST00000109529	ENSMUSP00000105155	TRANSLATION	protein_coding	-	CCDS38305.1	1	541	19	10.585	10.4	454.9	0	-4,-6	-	-	19.992	ALTERNATIVE:1
ENSMUSG00000027646	Src	ENSMUST00000109531	ENSMUSP00000105157	TRANSLATION	protein_coding	-	CCDS16978.1	5	535	19	10.75	10.4	466.2	0	-4,-6	-	-	21	PRINCIPAL:3
ENSMUSG00000027646	Src	ENSMUST00000092576	ENSMUSP00000090237	TRANSLATION	protein_coding	-	CCDS38305.1	5	541	19	10.585	10.4	454.9	0	-4,-6	-	-	19.992	ALTERNATIVE:1
ENSMUSG00000027646	Src	ENSMUST00000029175	ENSMUSP00000029175	TRANSLATION	protein_coding	-	CCDS16978.1	5	535	19	10.75	10.4	466.2	0	-4,-6	-	-	21	PRINCIPAL:3
ENSMUSG00000027646	Src	ENSMUST00000129770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075176	Olfr1085	ENSMUST00000213279	ENSMUSP00000150258	TRANSLATION	protein_coding	-	CCDS16263.1	5	313	0	0.2	5.1	165.7	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075176	Olfr1085	ENSMUST00000099879	ENSMUSP00000097464	TRANSLATION	protein_coding	-	CCDS16263.1	-	313	0	0.2	5.1	165.7	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075176	Olfr1085	ENSMUST00000214566	ENSMUSP00000150955	TRANSLATION	protein_coding	-	CCDS16263.1	5	313	0	0.2	5.1	165.7	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025781	Atp5c1	ENSMUST00000114896	ENSMUSP00000110546	TRANSLATION	protein_coding	-	CCDS50497.1	1	274	5	6.83	1.5	271.4	0	-4,-7	-	-	16.166	MINOR
ENSMUSG00000025781	Atp5c1	ENSMUST00000114897	ENSMUSP00000110547	TRANSLATION	protein_coding	-	CCDS38045.1	1	298	5	7.33	12.8	271.4	0	-1,1	-	-	21	PRINCIPAL:2
ENSMUSG00000025781	Atp5c1	ENSMUST00000139810	ENSMUSP00000123100	TRANSLATION	protein_coding	stop	-	5	154	0	3.83	0	121.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025781	Atp5c1	ENSMUST00000026887	ENSMUSP00000026887	TRANSLATION	protein_coding	-	-	5	297	5	7.33	12.8	271.4	0	-1,1	-	-	21	ALTERNATIVE:1
ENSMUSG00000025781	Atp5c1	ENSMUST00000145530	ENSMUSP00000116508	TRANSLATION	protein_coding	stop	-	5	188	0	4.83	0	147.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025781	Atp5c1	ENSMUST00000130067	ENSMUSP00000117182	TRANSLATION	protein_coding	stop	-	3	101	0	2.33	0	97.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025781	Atp5c1	ENSMUST00000153554	ENSMUSP00000116368	TRANSLATION	protein_coding	stop	-	3	171	0	4.33	0	138.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000140188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027546	Atp9a	ENSMUST00000156397	ENSMUSP00000119732	TRANSLATION	protein_coding	stop	-	3	189	0	1.043	0	72.5	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000109175	ENSMUSP00000104804	TRANSLATION	protein_coding	-	CCDS71202.1	1	1031	6	8.855	0.5	326.8	9	-4,-7	-	-	18	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000178504	ENSMUSP00000136793	TRANSLATION	protein_coding	-	-	5	1047	6	8.825	12.1	326.8	9	-4,-6	-	-	21.94	PRINCIPAL:1
ENSMUSG00000027546	Atp9a	ENSMUST00000156555	ENSMUSP00000119315	TRANSLATION	protein_coding	stop	-	3	88	0	0.6	0	72.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000109177	ENSMUSP00000104806	TRANSLATION	protein_coding	-	CCDS71203.1	1	1029	6	8.855	0.5	326.8	9	-4,-7	-	-	18	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000151610	ENSMUSP00000121364	TRANSLATION	protein_coding	stop	-	3	62	0	0.743	0	0	3	0,-4	-	-	-1	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000109176	ENSMUSP00000104805	TRANSLATION	protein_coding	-	-	1	1105	6	8.855	0	326.8	9	-4,0	-	-	18	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000029060	ENSMUSP00000029060	TRANSLATION	protein_coding	-	CCDS38345.1	1	1047	6	8.855	12.1	326.8	9	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000027546	Atp9a	ENSMUST00000123156	ENSMUSP00000114868	TRANSLATION	protein_coding	stop	-	3	112	0	0.645	0	72.5	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000027546	Atp9a	ENSMUST00000147757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075379	Olfr358	ENSMUST00000100146	ENSMUSP00000097724	TRANSLATION	protein_coding	-	CCDS15991.1	-	330	0	0.36	1.5	165.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075379	Olfr358	ENSMUST00000216437	ENSMUSP00000150781	TRANSLATION	protein_coding	-	CCDS15991.1	5	330	0	0.36	1.5	165.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027433	Xrn2	ENSMUST00000147057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027433	Xrn2	ENSMUST00000028921	ENSMUSP00000028921	TRANSLATION	protein_coding	-	CCDS38258.1	1	951	4	9.985	8.8	343.3	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000027433	Xrn2	ENSMUST00000137358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027433	Xrn2	ENSMUST00000136136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026848	Tor1b	ENSMUST00000195010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026848	Tor1b	ENSMUST00000132514	ENSMUSP00000117612	TRANSLATION	nonsense_mediated_decay	start	-	5	68	10	1	0	59.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026848	Tor1b	ENSMUST00000028199	ENSMUSP00000028199	TRANSLATION	protein_coding	-	CCDS15890.1	1	336	11	6.05	1.5	167.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026848	Tor1b	ENSMUST00000135507	ENSMUSP00000117888	TRANSLATION	nonsense_mediated_decay	-	-	3	179	11	2.3	0	141.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026848	Tor1b	ENSMUST00000155213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026848	Tor1b	ENSMUST00000133544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026848	Tor1b	ENSMUST00000156711	ENSMUSP00000120415	TRANSLATION	nonsense_mediated_decay	start	-	1	122	11	2.3	0	130.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000305	Cdh4	ENSMUST00000108911	ENSMUSP00000104539	TRANSLATION	protein_coding	-	CCDS84598.1	1	334	11	4	0.5	143.3	0	2,-2	-	-	0	MINOR
ENSMUSG00000000305	Cdh4	ENSMUST00000129659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000305	Cdh4	ENSMUST00000098996	ENSMUSP00000096594	TRANSLATION	protein_coding	start/stop	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000305	Cdh4	ENSMUST00000136411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000305	Cdh4	ENSMUST00000124708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000305	Cdh4	ENSMUST00000000314	ENSMUSP00000000314	TRANSLATION	protein_coding	-	CCDS17164.1	1	913	54	13.64	1.7	510.1	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000079324	4932414N04Rik	ENSMUST00000125621	ENSMUSP00000121558	TRANSLATION	protein_coding	stop	-	5	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079324	4932414N04Rik	ENSMUST00000055930	ENSMUSP00000059809	TRANSLATION	protein_coding	-	CCDS50598.1	5	752	0	0	0.5	35.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079324	4932414N04Rik	ENSMUST00000135023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079324	4932414N04Rik	ENSMUST00000128259	ENSMUSP00000135792	TRANSLATION	protein_coding	-	CCDS50598.1	1	752	0	0	0.5	35.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079324	4932414N04Rik	ENSMUST00000112332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074971	Fibin	ENSMUST00000099626	ENSMUSP00000097221	TRANSLATION	protein_coding	-	CCDS16511.1	-	217	0	0.24	1.5	344.8	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000026950	Neb	ENSMUST00000210179	ENSMUSP00000147915	TRANSLATION	protein_coding	stop	-	5	529	0	0	0	272.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000238749	ENSMUSP00000158777	TRANSLATION	protein_coding	-	-	-	7523	0	2.24	0.5	2694.8	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000026950	Neb	ENSMUST00000152851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026950	Neb	ENSMUST00000131236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026950	Neb	ENSMUST00000148356	ENSMUSP00000133401	TRANSLATION	protein_coding	start/stop	-	5	342	0	0	0	183.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000028320	ENSMUSP00000028320	TRANSLATION	protein_coding	-	-	5	3044	0	2.24	0	988.1	0	-4,-7	-	-	6	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000238288	ENSMUSP00000158760	TRANSLATION	protein_coding	-	-	-	7488	0	2.24	0	2692.5	0	-4,-5	-	-	11.862	ALTERNATIVE:2
ENSMUSG00000026950	Neb	ENSMUST00000075301	ENSMUSP00000074773	TRANSLATION	protein_coding	-	-	5	6909	0	2.24	0	2403.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000135200	ENSMUSP00000118735	TRANSLATION	protein_coding	start/stop	-	5	768	0	2.24	0	348	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000139672	ENSMUSP00000121411	TRANSLATION	protein_coding	start/stop	-	1	1190	0	0	0	478.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000136769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026950	Neb	ENSMUST00000209712	ENSMUSP00000147944	TRANSLATION	protein_coding	stop	-	5	269	0	0	0	119.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000036934	ENSMUSP00000047763	TRANSLATION	protein_coding	-	CCDS50584.1	5	7152	0	2.24	0.5	2539.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000026950	Neb	ENSMUST00000137410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075148	Olfr1141	ENSMUST00000099846	ENSMUSP00000097433	TRANSLATION	protein_coding	-	CCDS16307.1	-	311	0	0	0.5	97.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000000308	Ckmt1	ENSMUST00000153040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000308	Ckmt1	ENSMUST00000078222	ENSMUSP00000077349	TRANSLATION	protein_coding	-	CCDS16640.1	1	418	22	9.18	7.3	381.4	0	-2,1	-	-	21	PRINCIPAL:1
ENSMUSG00000000308	Ckmt1	ENSMUST00000000317	ENSMUSP00000000317	TRANSLATION	protein_coding	-	CCDS16640.1	1	418	22	9.18	7.3	381.4	0	-2,1	-	-	21	PRINCIPAL:1
ENSMUSG00000000308	Ckmt1	ENSMUST00000125221	ENSMUSP00000121930	TRANSLATION	protein_coding	stop	-	5	117	2	1.6	0	77.9	0	-2,1	-	-	-1	MINOR
ENSMUSG00000000308	Ckmt1	ENSMUST00000145380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000308	Ckmt1	ENSMUST00000150271	ENSMUSP00000120507	TRANSLATION	protein_coding	stop	-	5	251	7	5.18	0	157.4	0	-2,1	-	-	-1	MINOR
ENSMUSG00000000308	Ckmt1	ENSMUST00000129130	ENSMUSP00000123130	TRANSLATION	protein_coding	stop	-	5	204	5	3.43	0	104.9	0	-3,1	-	-	-1	MINOR
ENSMUSG00000000308	Ckmt1	ENSMUST00000128612	ENSMUSP00000115610	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0.6	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000000308	Ckmt1	ENSMUST00000126130	ENSMUSP00000117463	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0.6	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000000308	Ckmt1	ENSMUST00000125812	ENSMUSP00000115501	TRANSLATION	protein_coding	stop	-	5	149	2	2.68	0	104.9	0	-2,1	-	-	-1	MINOR
ENSMUSG00000078895	Gm11009	ENSMUST00000108961	ENSMUSP00000104589	TRANSLATION	protein_coding	start	-	5	138	7	2.45	0	89.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027424	Mgme1	ENSMUST00000110028	ENSMUSP00000105655	TRANSLATION	protein_coding	-	CCDS16816.1	1	338	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000027424	Mgme1	ENSMUST00000110027	ENSMUSP00000105654	TRANSLATION	protein_coding	-	CCDS16816.1	1	338	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000027424	Mgme1	ENSMUST00000028910	ENSMUSP00000028910	TRANSLATION	protein_coding	-	CCDS16816.1	1	338	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000058194	Olfr1126	ENSMUST00000213366	ENSMUSP00000150504	TRANSLATION	protein_coding	-	CCDS16292.1	3	314	0	0.36	1.5	174.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058194	Olfr1126	ENSMUST00000071355	ENSMUSP00000071313	TRANSLATION	protein_coding	-	CCDS16292.1	-	314	0	0.36	1.5	174.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000017943	Gdap1l1	ENSMUST00000109421	ENSMUSP00000105048	TRANSLATION	protein_coding	-	-	1	370	12	2.32	7.5	56.4	1	-4,-5	-	-	19.956	ALTERNATIVE:1
ENSMUSG00000017943	Gdap1l1	ENSMUST00000018087	ENSMUSP00000018087	TRANSLATION	protein_coding	-	CCDS50791.1	1	367	12	2.32	7.5	67.4	1	-4,-5	-	-	20.922	PRINCIPAL:2
ENSMUSG00000017943	Gdap1l1	ENSMUST00000109420	ENSMUSP00000105047	TRANSLATION	protein_coding	-	CCDS50791.1	1	367	12	2.32	7.5	67.4	1	-4,-5	-	-	20.922	PRINCIPAL:2
ENSMUSG00000017943	Gdap1l1	ENSMUST00000137070	ENSMUSP00000119421	TRANSLATION	protein_coding	stop	-	5	266	11	2.32	0	68.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075023	Accsl	ENSMUST00000143033	ENSMUSP00000118053	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075023	Accsl	ENSMUST00000141561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075023	Accsl	ENSMUST00000129248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075023	Accsl	ENSMUST00000133562	ENSMUSP00000120924	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075023	Accsl	ENSMUST00000099690	ENSMUSP00000097281	TRANSLATION	protein_coding	-	CCDS38183.1	1	580	14	9.715	0.5	176.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075023	Accsl	ENSMUST00000128995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075023	Accsl	ENSMUST00000151579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075023	Accsl	ENSMUST00000132722	ENSMUSP00000121623	TRANSLATION	protein_coding	start	-	2	83	0	1.9	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074939	Chrm5	ENSMUST00000099589	ENSMUSP00000097185	TRANSLATION	protein_coding	-	CCDS16556.1	-	532	0	0.6	6.3	262.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000018326	Ywhab	ENSMUST00000131288	ENSMUSP00000117125	TRANSLATION	protein_coding	stop	-	3	159	0	2.5	0	213.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018326	Ywhab	ENSMUST00000018470	ENSMUSP00000018470	TRANSLATION	protein_coding	-	CCDS17019.1	1	246	0	5	19.5	362.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038312	Edem2	ENSMUST00000040833	ENSMUSP00000041202	TRANSLATION	protein_coding	-	CCDS16953.1	1	577	0	6.8	6.3	385.4	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000038312	Edem2	ENSMUST00000148571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038312	Edem2	ENSMUST00000139868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038312	Edem2	ENSMUST00000131350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045319	Proser2	ENSMUST00000114942	ENSMUSP00000110592	TRANSLATION	protein_coding	-	CCDS15671.1	1	471	0	0	1.5	62.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045319	Proser2	ENSMUST00000194054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045319	Proser2	ENSMUST00000126551	ENSMUSP00000115240	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	27.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045319	Proser2	ENSMUST00000054254	ENSMUSP00000060780	TRANSLATION	protein_coding	-	CCDS15671.1	1	471	0	0	1.5	62.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075137	Olfr1163	ENSMUST00000099835	ENSMUSP00000097423	TRANSLATION	protein_coding	-	CCDS16324.1	-	316	0	0	1.5	151.2	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000075137	Olfr1163	ENSMUST00000215268	ENSMUSP00000149399	TRANSLATION	protein_coding	-	CCDS16324.1	5	316	0	0	1.5	151.2	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026819	Slc25a25	ENSMUST00000128611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026819	Slc25a25	ENSMUST00000113307	ENSMUSP00000108932	TRANSLATION	protein_coding	-	CCDS71028.1	1	469	15	7.73	9.6	302.2	0	-2,-5	-	-	18.042	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000194756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026819	Slc25a25	ENSMUST00000028160	ENSMUSP00000028160	TRANSLATION	protein_coding	-	CCDS15915.1	1	514	15	8.17	5.1	328.3	0	-4,-7	-	-	18.921	PRINCIPAL:3
ENSMUSG00000026819	Slc25a25	ENSMUST00000127961	ENSMUSP00000121932	TRANSLATION	protein_coding	start/stop	-	3	184	15	4.11	0	51.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000113308	ENSMUSP00000108933	TRANSLATION	protein_coding	-	-	5	489	15	7.77	7.6	302.2	0	-1,-4	-	-	17.427	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000113310	ENSMUSP00000108936	TRANSLATION	protein_coding	-	CCDS50568.1	1	502	15	7.89	6.3	336.8	0	-4,-7	-	-	19.29	ALTERNATIVE:1
ENSMUSG00000026819	Slc25a25	ENSMUST00000143092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026819	Slc25a25	ENSMUST00000136361	ENSMUSP00000115617	TRANSLATION	protein_coding	stop	-	3	263	15	5.36	0	147.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000052119	ENSMUSP00000060581	TRANSLATION	protein_coding	-	CCDS50567.1	1	501	15	8.05	7.6	293.7	0	-1,-4	-	-	17.475	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000153886	ENSMUSP00000141486	TRANSLATION	protein_coding	stop	-	3	112	5	3.25	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026819	Slc25a25	ENSMUST00000153782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094764	Olfr346	ENSMUST00000078854	ENSMUSP00000077897	TRANSLATION	protein_coding	-	CCDS15978.1	-	309	0	0.42	2.7	195.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094764	Olfr346	ENSMUST00000213258	ENSMUSP00000149916	TRANSLATION	protein_coding	-	CCDS15978.1	5	309	0	0.42	2.7	195.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000069080	Lcn11	ENSMUST00000091278	ENSMUSP00000088822	TRANSLATION	protein_coding	-	CCDS50536.1	2	178	0	3.55	0.5	73.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026980	Ly75	ENSMUST00000112533	ENSMUSP00000108152	TRANSLATION	protein_coding	-	-	5	1723	11	13.1048	1.5	496.6	1	2,-2	-	-	17.808	ALTERNATIVE:2
ENSMUSG00000026980	Ly75	ENSMUST00000028362	ENSMUSP00000028362	TRANSLATION	protein_coding	-	CCDS38126.1	1	1723	11	13.2	1.5	496.6	1	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000046814	Gchfr	ENSMUST00000057454	ENSMUSP00000060835	TRANSLATION	protein_coding	-	CCDS38204.1	1	84	9	2.5	15.7	147.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000057447	Olfr1205	ENSMUST00000076438	ENSMUSP00000075769	TRANSLATION	protein_coding	-	CCDS16351.1	-	307	0	0.36	8.8	150.6	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000057447	Olfr1205	ENSMUST00000215929	ENSMUSP00000150206	TRANSLATION	protein_coding	-	CCDS16351.1	3	307	0	0.36	8.8	150.6	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000026806	Ddx31	ENSMUST00000113853	ENSMUSP00000109484	TRANSLATION	protein_coding	-	CCDS15848.1	1	687	13	8.56	1.5	303.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026806	Ddx31	ENSMUST00000152685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026806	Ddx31	ENSMUST00000147071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026806	Ddx31	ENSMUST00000147779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092123	Gm17581	ENSMUST00000166589	ENSMUSP00000129208	TRANSLATION	protein_coding	start/stop	-	-	19	0	0	0	0	0	-3,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000039660	Spout1	ENSMUST00000142669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039660	Spout1	ENSMUST00000125141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039660	Spout1	ENSMUST00000136630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039660	Spout1	ENSMUST00000144093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039660	Spout1	ENSMUST00000137656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039660	Spout1	ENSMUST00000100220	ENSMUSP00000097793	TRANSLATION	protein_coding	-	CCDS15873.2	1	385	0	8.25	0.5	368	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039660	Spout1	ENSMUST00000146466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039660	Spout1	ENSMUST00000127309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098640	Gm14214	ENSMUST00000185009	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000098640	Gm14214	ENSMUST00000184654	ENSMUSP00000138961	TRANSLATION	protein_coding	start	-	-	225	0	0.4	0	73.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000075114	Olfr1208	ENSMUST00000214121	ENSMUSP00000149280	TRANSLATION	protein_coding	-	CCDS16354.1	3	308	0	0	2.7	163.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000075114	Olfr1208	ENSMUST00000099810	ENSMUSP00000097398	TRANSLATION	protein_coding	-	CCDS16354.1	-	308	0	0	2.7	163.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000075114	Olfr1208	ENSMUST00000214297	ENSMUSP00000149695	TRANSLATION	protein_coding	-	CCDS16354.1	5	308	0	0	2.7	163.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046618	Olfml2a	ENSMUST00000057279	ENSMUSP00000058761	TRANSLATION	protein_coding	-	CCDS16013.1	1	681	0	1.4	0.5	283	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000075165	Olfr1105	ENSMUST00000099868	ENSMUSP00000097453	TRANSLATION	protein_coding	-	CCDS16277.1	-	312	0	0.42	2.7	159	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075165	Olfr1105	ENSMUST00000215978	ENSMUSP00000149148	TRANSLATION	protein_coding	-	CCDS16277.1	3	312	0	0.42	2.7	159	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078879	Zfp973	ENSMUST00000121956	ENSMUSP00000113873	TRANSLATION	protein_coding	-	-	1	83	0	1.45	0	71.2	0	-4,-6	-	-	3.552	MINOR
ENSMUSG00000078879	Zfp973	ENSMUST00000141122	ENSMUSP00000115307	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	1.45	0	71.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078879	Zfp973	ENSMUST00000108985	ENSMUSP00000104613	TRANSLATION	protein_coding	-	CCDS84596.1	5	318	30	2.45	0.5	205.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026799	Med27	ENSMUST00000028139	ENSMUSP00000028139	TRANSLATION	protein_coding	-	CCDS15853.1	1	311	4	0	17.5	95.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000026799	Med27	ENSMUST00000123522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026799	Med27	ENSMUST00000113830	ENSMUSP00000109461	TRANSLATION	protein_coding	-	CCDS71014.1	1	208	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000159034	ENSMUSP00000124233	TRANSLATION	protein_coding	-	-	5	69	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000162773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026799	Med27	ENSMUST00000162603	ENSMUSP00000125008	TRANSLATION	protein_coding	start/stop	-	3	172	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000159280	ENSMUSP00000125390	TRANSLATION	protein_coding	-	CCDS79764.1	2	172	4	0	1.5	95.3	0	-4,-2	-	-	10.12	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000162623	ENSMUSP00000125042	TRANSLATION	protein_coding	stop	-	5	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000162597	ENSMUSP00000125360	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026799	Med27	ENSMUST00000147547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026940	Ccdc183	ENSMUST00000028309	ENSMUSP00000028309	TRANSLATION	protein_coding	-	CCDS50533.1	5	534	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026940	Ccdc183	ENSMUST00000129520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027206	Cops2	ENSMUST00000110462	ENSMUSP00000106089	TRANSLATION	protein_coding	-	-	5	402	3	10.396	1	91	0	-4,-5	-	-	13.002	MINOR
ENSMUSG00000027206	Cops2	ENSMUST00000028635	ENSMUSP00000028635	TRANSLATION	protein_coding	-	CCDS16679.1	1	443	3	11.33	19.5	91	0	-4,-5	-	-	18.868	PRINCIPAL:3
ENSMUSG00000027206	Cops2	ENSMUST00000152683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027206	Cops2	ENSMUST00000110463	ENSMUSP00000106090	TRANSLATION	protein_coding	-	CCDS71133.1	1	450	3	11.396	14.8	91	0	-4,-5	-	-	17.984	ALTERNATIVE:1
ENSMUSG00000027206	Cops2	ENSMUST00000139343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027130	Slc12a6	ENSMUST00000053666	ENSMUSP00000051490	TRANSLATION	protein_coding	-	CCDS16552.1	1	1099	0	2.16	8.8	389.5	8	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000027130	Slc12a6	ENSMUST00000137896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027130	Slc12a6	ENSMUST00000132752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027130	Slc12a6	ENSMUST00000156470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027130	Slc12a6	ENSMUST00000110987	ENSMUSP00000106615	TRANSLATION	protein_coding	-	-	1	946	0	2.16	0	286.2	8	-4,-6	-	-	6	MINOR
ENSMUSG00000027130	Slc12a6	ENSMUST00000110991	ENSMUSP00000106619	TRANSLATION	protein_coding	-	-	1	1128	0	2.16	0	350.2	8	-4,-6	-	-	9.642	MINOR
ENSMUSG00000027130	Slc12a6	ENSMUST00000028549	ENSMUSP00000028549	TRANSLATION	protein_coding	-	CCDS16551.1	1	1150	0	2.16	7.5	389.5	8	-4,-6	-	-	14.499	PRINCIPAL:4
ENSMUSG00000027130	Slc12a6	ENSMUST00000133840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027018	Hat1	ENSMUST00000028408	ENSMUSP00000028408	TRANSLATION	protein_coding	-	CCDS16114.1	1	416	17	8.75	5.3	151.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027018	Hat1	ENSMUST00000145147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027018	Hat1	ENSMUST00000112122	ENSMUSP00000107750	TRANSLATION	protein_coding	-	-	5	423	17	8.585	0	151.5	0	-4,-5	-	-	17.67	MINOR
ENSMUSG00000027018	Hat1	ENSMUST00000144888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044364	Tmem74b	ENSMUST00000060196	ENSMUSP00000060017	TRANSLATION	protein_coding	-	CCDS50748.1	1	232	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000044364	Tmem74b	ENSMUST00000109872	ENSMUSP00000105498	TRANSLATION	protein_coding	-	CCDS50748.1	1	232	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000009555	Cdk9	ENSMUST00000123170	ENSMUSP00000115318	TRANSLATION	nonsense_mediated_decay	-	-	1	36	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009555	Cdk9	ENSMUST00000155205	ENSMUSP00000115299	TRANSLATION	protein_coding	stop	-	3	54	4	1.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009555	Cdk9	ENSMUST00000154131	ENSMUSP00000120857	TRANSLATION	nonsense_mediated_decay	-	-	3	61	9	2.08	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009555	Cdk9	ENSMUST00000128265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009555	Cdk9	ENSMUST00000125058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009555	Cdk9	ENSMUST00000009699	ENSMUSP00000009699	TRANSLATION	protein_coding	-	CCDS15927.1	1	372	20	7.66	12.5	236	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000009555	Cdk9	ENSMUST00000120105	ENSMUSP00000113327	TRANSLATION	protein_coding	-	-	1	321	11	5.91	0	189.1	0	-4,-5	-	-	5.688	MINOR
ENSMUSG00000009555	Cdk9	ENSMUST00000130399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009555	Cdk9	ENSMUST00000144210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005973	Rcn1	ENSMUST00000006128	ENSMUSP00000006128	TRANSLATION	protein_coding	-	CCDS16498.1	1	325	25	2.13	1.5	43.6	0	4,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000005973	Rcn1	ENSMUST00000127019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044338	Aplnr	ENSMUST00000184728	ENSMUSP00000139142	TRANSLATION	protein_coding	start	-	5	88	0	0.8	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000044338	Aplnr	ENSMUST00000057019	ENSMUSP00000053638	TRANSLATION	protein_coding	-	CCDS16201.1	-	377	0	2.04	5.1	202.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000068115	Ninl	ENSMUST00000149979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068115	Ninl	ENSMUST00000124135	ENSMUSP00000122069	TRANSLATION	protein_coding	start/stop	-	3	308	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068115	Ninl	ENSMUST00000109896	ENSMUSP00000105522	TRANSLATION	protein_coding	-	CCDS50744.1	5	1394	5	1	1.5	33.1	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000068115	Ninl	ENSMUST00000147293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068115	Ninl	ENSMUST00000150036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068115	Ninl	ENSMUST00000149268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068115	Ninl	ENSMUST00000150595	ENSMUSP00000117001	TRANSLATION	protein_coding	start/stop	-	3	256	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068115	Ninl	ENSMUST00000128627	ENSMUSP00000121872	TRANSLATION	protein_coding	stop	-	3	167	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068115	Ninl	ENSMUST00000128564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026774	Potegl	ENSMUST00000114505	ENSMUSP00000110150	TRANSLATION	protein_coding	-	-	5	307	0	3.466	0	61	0	-4,-7	-	-	6.438	MINOR
ENSMUSG00000026774	Potegl	ENSMUST00000028113	ENSMUSP00000028113	TRANSLATION	protein_coding	-	CCDS50517.1	1	382	0	4.466	0.5	120.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009549	Srp14	ENSMUST00000138189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009549	Srp14	ENSMUST00000009693	ENSMUSP00000009693	TRANSLATION	protein_coding	-	CCDS16577.1	1	110	0	3.16	2.7	91.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009549	Srp14	ENSMUST00000110862	ENSMUSP00000106486	TRANSLATION	protein_coding	-	-	2	97	0	2.395	0	61.1	0	-4,-5	-	-	8.46	MINOR
ENSMUSG00000009549	Srp14	ENSMUST00000149615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046845	Il1f10	ENSMUST00000058056	ENSMUSP00000063004	TRANSLATION	protein_coding	-	CCDS15735.1	1	152	0	3.08	6.4	65.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000099486	Olfr1228	ENSMUST00000216392	ENSMUSP00000150633	TRANSLATION	protein_coding	-	-	5	311	0	0.2	2.7	162.8	5	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000099486	Olfr1228	ENSMUST00000190757	ENSMUSP00000139920	TRANSLATION	protein_coding	-	CCDS16371.1	-	323	0	0.2	0.5	162.8	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000099486	Olfr1228	ENSMUST00000215447	ENSMUSP00000150878	TRANSLATION	protein_coding	-	-	2	311	0	0.2	2.7	162.8	5	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000050619	Zscan29	ENSMUST00000110661	ENSMUSP00000106289	TRANSLATION	protein_coding	-	CCDS71123.1	5	834	24	2	0.5	423.9	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000050619	Zscan29	ENSMUST00000156370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050619	Zscan29	ENSMUST00000079024	ENSMUSP00000078033	TRANSLATION	protein_coding	-	-	5	548	0	1	0	274.2	0	-4,0	-	-	3	MINOR
ENSMUSG00000050619	Zscan29	ENSMUST00000146243	ENSMUSP00000120997	TRANSLATION	protein_coding	-	-	1	206	0	1	0	142.7	0	-4,0	-	-	3	MINOR
ENSMUSG00000050619	Zscan29	ENSMUST00000163766	ENSMUSP00000125987	TRANSLATION	protein_coding	-	-	5	869	24	2	0	423.9	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000016386	Mpped2	ENSMUST00000124461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016386	Mpped2	ENSMUST00000125023	ENSMUSP00000123267	TRANSLATION	protein_coding	stop	-	5	283	15	6.5	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016386	Mpped2	ENSMUST00000133401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016386	Mpped2	ENSMUST00000111063	ENSMUSP00000106692	TRANSLATION	protein_coding	-	CCDS50654.1	1	294	15	6.83	19.5	43.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000016386	Mpped2	ENSMUST00000016530	ENSMUSP00000016530	TRANSLATION	protein_coding	-	CCDS50654.1	1	294	15	6.83	19.5	43.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000016386	Mpped2	ENSMUST00000144155	ENSMUSP00000114253	TRANSLATION	protein_coding	stop	-	3	67	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046110	Serinc4	ENSMUST00000140752	ENSMUSP00000116676	TRANSLATION	nonsense_mediated_decay	start	-	5	109	0	0	0	40.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000046110	Serinc4	ENSMUST00000140135	ENSMUSP00000117054	TRANSLATION	nonsense_mediated_decay	start	-	5	109	0	0	0	40.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000046110	Serinc4	ENSMUST00000110613	ENSMUSP00000106243	TRANSLATION	protein_coding	-	-	1	432	0	0	0	217.4	11	-4,-7	-	-	0	MINOR
ENSMUSG00000046110	Serinc4	ENSMUST00000126678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046110	Serinc4	ENSMUST00000127435	ENSMUSP00000119373	TRANSLATION	nonsense_mediated_decay	start	-	5	236	0	0	0	194.8	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000046110	Serinc4	ENSMUST00000056312	ENSMUSP00000051261	TRANSLATION	protein_coding	-	CCDS16646.1	1	492	0	0	1.5	406.2	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000108891	Olfr1291-ps1	ENSMUST00000219064	ENSMUSP00000153549	TRANSLATION	protein_coding	start	-	-	298	0	0.4	0.5	156.4	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000108891	Olfr1291-ps1	ENSMUST00000121345	ENSMUSP00000153499	TRANSLATION	protein_coding	-	-	5	326	0	0.4	1	156.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027001	Dusp19	ENSMUST00000028384	ENSMUSP00000028384	TRANSLATION	protein_coding	-	CCDS16178.1	1	220	8	2.9	1.5	111.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027001	Dusp19	ENSMUST00000151204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027001	Dusp19	ENSMUST00000147290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027001	Dusp19	ENSMUST00000148084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027001	Dusp19	ENSMUST00000125033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075172	Olfr1090	ENSMUST00000217043	ENSMUSP00000149968	TRANSLATION	protein_coding	-	CCDS16267.1	3	313	0	0.2	7.5	160.9	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075172	Olfr1090	ENSMUST00000215991	ENSMUSP00000150257	TRANSLATION	protein_coding	-	CCDS16267.1	5	313	0	0.2	7.5	160.9	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075172	Olfr1090	ENSMUST00000099875	ENSMUSP00000097460	TRANSLATION	protein_coding	-	CCDS16267.1	-	313	0	0.2	7.5	160.9	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027342	Pcna	ENSMUST00000149627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027342	Pcna	ENSMUST00000028817	ENSMUSP00000028817	TRANSLATION	protein_coding	-	CCDS16771.1	1	261	0	5.5	19.5	410.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027342	Pcna	ENSMUST00000135181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027342	Pcna	ENSMUST00000136676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027342	Pcna	ENSMUST00000140338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027408	Cpxm1	ENSMUST00000130533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027408	Cpxm1	ENSMUST00000028897	ENSMUSP00000028897	TRANSLATION	protein_coding	-	CCDS16740.1	1	722	8	9.51	1.5	388.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000075210	Olfr1012	ENSMUST00000099916	ENSMUSP00000097500	TRANSLATION	protein_coding	-	CCDS16217.1	-	311	0	0.36	5.2	160.6	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075210	Olfr1012	ENSMUST00000214958	ENSMUSP00000148952	TRANSLATION	protein_coding	-	CCDS16217.1	3	311	0	0.36	5.2	160.6	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075210	Olfr1012	ENSMUST00000214255	ENSMUSP00000149946	TRANSLATION	protein_coding	-	CCDS16217.1	5	311	0	0.36	5.2	160.6	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027465	Tbc1d20	ENSMUST00000144252	ENSMUSP00000122542	TRANSLATION	protein_coding	stop	-	3	80	0	2.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027465	Tbc1d20	ENSMUST00000028963	ENSMUSP00000028963	TRANSLATION	protein_coding	-	CCDS16880.1	1	402	0	8.1	7.5	97.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027465	Tbc1d20	ENSMUST00000147591	ENSMUSP00000119209	TRANSLATION	protein_coding	stop	-	5	155	0	4.75	0	64.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027465	Tbc1d20	ENSMUST00000141373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027465	Tbc1d20	ENSMUST00000140482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026803	Ttf1	ENSMUST00000130506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026803	Ttf1	ENSMUST00000122866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026803	Ttf1	ENSMUST00000100237	ENSMUSP00000097809	TRANSLATION	protein_coding	-	CCDS38089.1	5	859	0	1.56	0.5	25	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026803	Ttf1	ENSMUST00000142786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026976	Pax8	ENSMUST00000152614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026976	Pax8	ENSMUST00000028355	ENSMUSP00000028355	TRANSLATION	protein_coding	-	CCDS15738.1	1	457	0	3.33	5.2	424.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000026976	Pax8	ENSMUST00000136228	ENSMUSP00000133316	TRANSLATION	protein_coding	stop	-	5	404	0	3.33	0	327.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026976	Pax8	ENSMUST00000133746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026976	Pax8	ENSMUST00000149294	ENSMUSP00000115194	TRANSLATION	protein_coding	stop	-	5	412	0	3.33	1.2	241.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026976	Pax8	ENSMUST00000149860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026976	Pax8	ENSMUST00000153535	ENSMUSP00000120319	TRANSLATION	protein_coding	stop	-	3	169	0	3.33	0	238.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026976	Pax8	ENSMUST00000153601	ENSMUSP00000134343	TRANSLATION	protein_coding	-	-	5	322	0	3.33	1.2	241.3	0	-4,-2	-	-	6.096	MINOR
ENSMUSG00000027401	Tgm3	ENSMUST00000110299	ENSMUSP00000105928	TRANSLATION	protein_coding	-	CCDS38240.1	1	693	11	12	1.5	324.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051413	Plagl2	ENSMUST00000056924	ENSMUSP00000055709	TRANSLATION	protein_coding	-	CCDS16908.1	1	496	24	0.8	7.5	62.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000051413	Plagl2	ENSMUST00000109795	ENSMUSP00000105419	TRANSLATION	protein_coding	-	CCDS16908.1	1	496	24	0.8	7.5	62.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000078897	Gm4724	ENSMUST00000152941	ENSMUSP00000121866	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078897	Gm4724	ENSMUST00000109045	ENSMUSP00000104673	TRANSLATION	protein_coding	-	CCDS57193.1	2	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078897	Gm4724	ENSMUST00000153210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078897	Gm4724	ENSMUST00000109046	ENSMUSP00000104674	TRANSLATION	protein_coding	-	CCDS57193.1	5	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000217139	ENSMUSP00000150561	TRANSLATION	protein_coding	-	CCDS16408.1	5	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000215578	ENSMUSP00000151124	TRANSLATION	protein_coding	-	CCDS16408.1	5	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000213946	ENSMUSP00000150124	TRANSLATION	protein_coding	-	CCDS16408.1	5	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000099754	ENSMUSP00000097343	TRANSLATION	protein_coding	-	CCDS16408.1	-	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000215975	ENSMUSP00000149396	TRANSLATION	protein_coding	-	CCDS16408.1	5	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075065	Olfr1270	ENSMUST00000216354	ENSMUSP00000149941	TRANSLATION	protein_coding	-	CCDS16408.1	5	304	0	0.36	2.8	183.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027387	Zc3h8	ENSMUST00000028866	ENSMUSP00000028866	TRANSLATION	protein_coding	-	CCDS16718.1	1	305	12	1.998	1.5	52.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075006	Gm10799	ENSMUST00000099666	ENSMUSP00000097259	TRANSLATION	protein_coding	start/stop	-	5	104	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000016356	Col20a1	ENSMUST00000152473	ENSMUSP00000117514	TRANSLATION	nonsense_mediated_decay	start	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016356	Col20a1	ENSMUST00000149179	ENSMUSP00000115291	TRANSLATION	protein_coding	-	-	5	1288	5	19.475	0	412.7	0	0,-4	-	-	13.748	MINOR
ENSMUSG00000016356	Col20a1	ENSMUST00000108856	ENSMUSP00000104484	TRANSLATION	protein_coding	-	-	5	1362	5	20.175	1	443.6	0	0,-4	-	-	17	ALTERNATIVE:2
ENSMUSG00000016356	Col20a1	ENSMUST00000155425	ENSMUSP00000114654	TRANSLATION	protein_coding	start	-	1	135	0	2.75	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016356	Col20a1	ENSMUST00000228434	ENSMUSP00000153871	TRANSLATION	protein_coding	-	CCDS50844.1	-	1320	5	20.175	0.5	443.6	0	0,-4	-	-	17	PRINCIPAL:2
ENSMUSG00000027203	Dut	ENSMUST00000051605	ENSMUSP00000057854	TRANSLATION	protein_coding	-	CCDS16675.1	1	162	20	4.83	3.5	168	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000027203	Dut	ENSMUST00000133211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027203	Dut	ENSMUST00000082122	ENSMUSP00000080767	TRANSLATION	protein_coding	-	CCDS50695.1	1	200	20	4.5	0.5	168	0	-3,1	-	-	17.34	MINOR
ENSMUSG00000027397	Slc20a1	ENSMUST00000028880	ENSMUSP00000028880	TRANSLATION	protein_coding	-	CCDS16722.1	1	681	0	0	0.5	458.5	8	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027397	Slc20a1	ENSMUST00000144025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027397	Slc20a1	ENSMUST00000144744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027397	Slc20a1	ENSMUST00000110315	ENSMUSP00000105944	TRANSLATION	protein_coding	-	CCDS16722.1	1	681	0	0	0.5	458.5	8	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027397	Slc20a1	ENSMUST00000140907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027397	Slc20a1	ENSMUST00000148988	ENSMUSP00000121074	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000027397	Slc20a1	ENSMUST00000125714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027397	Slc20a1	ENSMUST00000141285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075075	Olfr1253	ENSMUST00000215185	ENSMUSP00000151139	TRANSLATION	protein_coding	-	CCDS50628.1	5	318	0	0.2	1.5	153	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075075	Olfr1253	ENSMUST00000099765	ENSMUSP00000097353	TRANSLATION	protein_coding	-	CCDS50628.1	-	318	0	0.2	1.5	153	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075075	Olfr1253	ENSMUST00000215988	ENSMUSP00000151024	TRANSLATION	protein_coding	-	CCDS50628.1	5	318	0	0.2	1.5	153	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075075	Olfr1253	ENSMUST00000213484	ENSMUSP00000149312	TRANSLATION	protein_coding	-	CCDS50628.1	5	318	0	0.2	1.5	153	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068264	Ap5s1	ENSMUST00000153901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068264	Ap5s1	ENSMUST00000153097	ENSMUSP00000121488	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	98.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068264	Ap5s1	ENSMUST00000089506	ENSMUSP00000086933	TRANSLATION	protein_coding	-	CCDS16759.1	1	248	0	0	0.5	164.1	0	-4,-6	-	-	1.932	MINOR
ENSMUSG00000068264	Ap5s1	ENSMUST00000134086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068264	Ap5s1	ENSMUST00000143546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068264	Ap5s1	ENSMUST00000110210	ENSMUSP00000105839	TRANSLATION	protein_coding	-	CCDS71147.1	1	170	0	0	0.5	166.4	0	-4,-6	-	-	2.07	MINOR
ENSMUSG00000068264	Ap5s1	ENSMUST00000110208	ENSMUSP00000105837	TRANSLATION	protein_coding	-	CCDS71148.1	1	200	0	0	7.5	231.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000068264	Ap5s1	ENSMUST00000110206	ENSMUSP00000105835	TRANSLATION	protein_coding	-	-	3	118	0	0	0	51.7	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000139719	ENSMUSP00000116450	TRANSLATION	protein_coding	stop	-	2	220	7	6.16	0	183.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000133877	ENSMUSP00000117643	TRANSLATION	protein_coding,RT	stop	-	5	249	10	6.83	0	225.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000138254	ENSMUSP00000116062	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	180	2	4.16	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000091132	ENSMUSP00000088663	TRANSLATION	protein_coding	-	CCDS15876.1	1	311	11	8.49	0.5	233.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079484	Phyhd1	ENSMUST00000113643	ENSMUSP00000109273	TRANSLATION	protein_coding,RT	-	CCDS57164.1	5	270	10	7.74	2.9	202.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000147204	ENSMUSP00000122095	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	54	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000127689	ENSMUSP00000119543	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	159	0	3.83	0	78.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000150695	ENSMUSP00000121995	TRANSLATION	protein_coding,RT	stop	-	3	222	9	6.08	0	127.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000154988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079484	Phyhd1	ENSMUST00000129512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079484	Phyhd1	ENSMUST00000085290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079484	Phyhd1	ENSMUST00000154647	ENSMUSP00000121371	TRANSLATION	protein_coding,RT	-	CCDS57163.1	1	291	11	8.49	5.1	233.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079484	Phyhd1	ENSMUST00000113645	ENSMUSP00000109275	TRANSLATION	protein_coding,RT	-	CCDS57163.1	1	291	11	8.49	5.1	233.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000138536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000128517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000145508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000154359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000155601	ENSMUSP00000115952	TRANSLATION	nonsense_mediated_decay	start	-	3	158	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000139031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036833	Pnpla7	ENSMUST00000153618	ENSMUSP00000117428	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000137913	ENSMUSP00000141577	TRANSLATION	nonsense_mediated_decay	-	-	2	222	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000132082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000142139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036833	Pnpla7	ENSMUST00000045295	ENSMUSP00000044078	TRANSLATION	protein_coding	-	CCDS50522.1	1	1352	0	7.169	1.5	237.7	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036833	Pnpla7	ENSMUST00000146153	ENSMUSP00000117907	TRANSLATION	protein_coding	start/stop	-	5	187	0	0.464	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000139643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036833	Pnpla7	ENSMUST00000152777	ENSMUSP00000122394	TRANSLATION	protein_coding	stop	-	5	179	0	0	0	38	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036833	Pnpla7	ENSMUST00000141584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027330	Cdc25b	ENSMUST00000132727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027330	Cdc25b	ENSMUST00000145556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027330	Cdc25b	ENSMUST00000079857	ENSMUSP00000078784	TRANSLATION	protein_coding	-	CCDS50717.1	1	550	0	5.55	1.5	321	0	-4,-2	-	-	8.58	MINOR
ENSMUSG00000027330	Cdc25b	ENSMUST00000141732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027330	Cdc25b	ENSMUST00000125423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027330	Cdc25b	ENSMUST00000028804	ENSMUSP00000028804	TRANSLATION	protein_coding	-	CCDS16758.1	1	576	0	5.55	0.5	378	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027330	Cdc25b	ENSMUST00000138669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002733	Plekha3	ENSMUST00000125119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002733	Plekha3	ENSMUST00000111920	ENSMUSP00000107551	TRANSLATION	protein_coding	-	CCDS16162.1	1	297	10	2.5	7.6	48.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000050737	Ptges	ENSMUST00000132244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050737	Ptges	ENSMUST00000126588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050737	Ptges	ENSMUST00000056046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050737	Ptges	ENSMUST00000102852	ENSMUSP00000099916	TRANSLATION	protein_coding	-	CCDS15889.1	1	153	13	2.75	6.3	81.7	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000075104	Olfr1219	ENSMUST00000099797	ENSMUSP00000097385	TRANSLATION	protein_coding	-	CCDS16364.1	-	311	0	0.36	1.5	156.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075104	Olfr1219	ENSMUST00000214442	ENSMUSP00000150101	TRANSLATION	protein_coding	-	CCDS16364.1	5	311	0	0.36	1.5	156.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075104	Olfr1219	ENSMUST00000215225	ENSMUSP00000149573	TRANSLATION	protein_coding	-	CCDS16364.1	5	311	0	0.36	1.5	156.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075104	Olfr1219	ENSMUST00000217421	ENSMUSP00000150043	TRANSLATION	protein_coding	-	CCDS16364.1	5	311	0	0.36	1.5	156.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075104	Olfr1219	ENSMUST00000213724	ENSMUSP00000151003	TRANSLATION	protein_coding	-	CCDS16364.1	5	311	0	0.36	1.5	156.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026809	Spaca9	ENSMUST00000144209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026809	Spaca9	ENSMUST00000102877	ENSMUSP00000099941	TRANSLATION	protein_coding	-	CCDS15845.1	1	168	0	0	8.8	269.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000026809	Spaca9	ENSMUST00000145014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026809	Spaca9	ENSMUST00000124840	ENSMUSP00000121846	TRANSLATION	protein_coding	-	CCDS15845.1	1	168	0	0	8.8	269.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000109403	Olfr1311	ENSMUST00000215321	ENSMUSP00000150617	TRANSLATION	protein_coding	-	CCDS16541.1	5	312	0	0.3	8.8	147.4	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000109403	Olfr1311	ENSMUST00000216319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109403	Olfr1311	ENSMUST00000213602	ENSMUSP00000151010	TRANSLATION	protein_coding	-	CCDS16541.1	5	312	0	0.3	8.8	147.4	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000109403	Olfr1311	ENSMUST00000208536	ENSMUSP00000147024	TRANSLATION	protein_coding	-	CCDS16541.1	-	312	0	0.3	8.8	147.4	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000115423	AL731706.1	ENSMUST00000227806	ENSMUSP00000154508	TRANSLATION	protein_coding	-	-	-	50	0	0	0	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027016	Zfp385b	ENSMUST00000151388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000128583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000145251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000111831	ENSMUSP00000107462	TRANSLATION	protein_coding	-	CCDS16164.1	1	482	16	0	1.5	111.1	0	-4,-6	-	-	12.232	PRINCIPAL:1
ENSMUSG00000027016	Zfp385b	ENSMUST00000129077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000137160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000090766	ENSMUSP00000088271	TRANSLATION	protein_coding	-	CCDS16164.1	1	482	16	0	1.5	111.1	0	-4,-6	-	-	12.232	PRINCIPAL:1
ENSMUSG00000027016	Zfp385b	ENSMUST00000111829	ENSMUSP00000107460	TRANSLATION	protein_coding	-	-	5	111	4	0	0	30.4	0	-4,-6	-	-	1.158	MINOR
ENSMUSG00000027016	Zfp385b	ENSMUST00000135756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027016	Zfp385b	ENSMUST00000171063	ENSMUSP00000126801	TRANSLATION	protein_coding	-	CCDS50612.1	5	394	12	0	3.9	80.7	0	-4,-1	-	-	8.86	MINOR
ENSMUSG00000027016	Zfp385b	ENSMUST00000111830	ENSMUSP00000107461	TRANSLATION	protein_coding	-	CCDS50611.1	1	368	12	0	5.3	80.7	0	-4,-5	-	-	9.512	MINOR
ENSMUSG00000018770	Atp5g3	ENSMUST00000111996	ENSMUSP00000107627	TRANSLATION	protein_coding	-	CCDS16136.1	2	141	0	2	17	44.1	1	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000018770	Atp5g3	ENSMUST00000155474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018770	Atp5g3	ENSMUST00000131045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018770	Atp5g3	ENSMUST00000018914	ENSMUSP00000018914	TRANSLATION	protein_coding	-	CCDS16136.1	1	141	0	2	17	44.1	1	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000018770	Atp5g3	ENSMUST00000142768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034278	Dnajc17	ENSMUST00000125731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034278	Dnajc17	ENSMUST00000038439	ENSMUSP00000041841	TRANSLATION	protein_coding	-	CCDS16593.1	1	303	0	5.99	3.9	100.7	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000034278	Dnajc17	ENSMUST00000141009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042359	Osbpl6	ENSMUST00000077972	ENSMUSP00000077123	TRANSLATION	protein_coding	-	CCDS16158.1	1	967	0	5.54	6.3	474.7	0	-4,-7	-	-	14.037	PRINCIPAL:3
ENSMUSG00000042359	Osbpl6	ENSMUST00000184442	ENSMUSP00000139363	TRANSLATION	nonsense_mediated_decay	start	-	1	801	0	5.28	0	430.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042359	Osbpl6	ENSMUST00000128034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042359	Osbpl6	ENSMUST00000111930	ENSMUSP00000107561	TRANSLATION	protein_coding	-	CCDS71079.1	1	928	0	5.54	4	474.7	0	-4,-7	-	-	13.155	MINOR
ENSMUSG00000042359	Osbpl6	ENSMUST00000124601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042359	Osbpl6	ENSMUST00000133275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042359	Osbpl6	ENSMUST00000134213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042359	Osbpl6	ENSMUST00000111929	ENSMUSP00000107560	TRANSLATION	protein_coding	-	CCDS71078.1	1	959	0	5.54	8.8	474.7	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000060332	Tmc2	ENSMUST00000166774	ENSMUSP00000125843	TRANSLATION	protein_coding	-	CCDS16736.1	2	888	0	0	1.5	126.5	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060332	Tmc2	ENSMUST00000077988	ENSMUSP00000077139	TRANSLATION	protein_coding	-	CCDS16736.1	1	888	0	0	1.5	126.5	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079286	Gm11084	ENSMUST00000112062	ENSMUSP00000107693	TRANSLATION	protein_coding	start/stop	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027272	Ubr1	ENSMUST00000138824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027272	Ubr1	ENSMUST00000028728	ENSMUSP00000028728	TRANSLATION	protein_coding	-	CCDS16628.1	1	1757	15	2.15	3.9	150.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027272	Ubr1	ENSMUST00000153868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027272	Ubr1	ENSMUST00000129790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027272	Ubr1	ENSMUST00000133408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027272	Ubr1	ENSMUST00000135891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027272	Ubr1	ENSMUST00000154023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027637	Rab5if	ENSMUST00000029165	ENSMUSP00000029165	TRANSLATION	protein_coding	-	CCDS16970.1	1	129	0	0	8.8	63.1	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000027637	Rab5if	ENSMUST00000126767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027637	Rab5if	ENSMUST00000152942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027637	Rab5if	ENSMUST00000152551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054455	Vapb	ENSMUST00000154306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054455	Vapb	ENSMUST00000067530	ENSMUSP00000064699	TRANSLATION	protein_coding	-	CCDS17146.1	1	243	0	3.5	7.5	110.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068290	Ddrgk1	ENSMUST00000134044	ENSMUSP00000114535	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	40.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068290	Ddrgk1	ENSMUST00000089559	ENSMUSP00000086988	TRANSLATION	protein_coding	-	CCDS38243.1	1	315	0	2.1	2.9	242.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000068290	Ddrgk1	ENSMUST00000124559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068290	Ddrgk1	ENSMUST00000135167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068290	Ddrgk1	ENSMUST00000135072	ENSMUSP00000121190	TRANSLATION	protein_coding	stop	-	5	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068290	Ddrgk1	ENSMUST00000153271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111863	Olfr347	ENSMUST00000216882	ENSMUSP00000151158	TRANSLATION	protein_coding	-	CCDS15979.1	5	312	0	0.42	1.5	195.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111863	Olfr347	ENSMUST00000078761	ENSMUSP00000077819	TRANSLATION	protein_coding	-	CCDS15979.1	-	312	0	0.42	1.5	195.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026914	Psmd14	ENSMUST00000139475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000146051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000125388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000028278	ENSMUSP00000028278	TRANSLATION	protein_coding	-	CCDS38127.1	1	310	3	8.5	18.3	168.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000026914	Psmd14	ENSMUST00000154627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000153683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000134658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026914	Psmd14	ENSMUST00000135265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033156	Cst10	ENSMUST00000047008	ENSMUSP00000043520	TRANSLATION	protein_coding	-	CCDS16853.1	1	148	0	2.35	0.5	86.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000033156	Cst10	ENSMUST00000109938	ENSMUSP00000105564	TRANSLATION	protein_coding	-	CCDS16853.1	2	148	0	2.35	0.5	86.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000033156	Cst10	ENSMUST00000109939	ENSMUSP00000105565	TRANSLATION	protein_coding	-	-	2	110	0	1.35	0	31.6	0	0,-3	-	-	5.628	MINOR
ENSMUSG00000026981	Il1rn	ENSMUST00000142093	ENSMUSP00000141269	TRANSLATION	protein_coding	-	-	3	52	0	1.5	0	0	0	-4,-7	-	-	1.998	MINOR
ENSMUSG00000026981	Il1rn	ENSMUST00000114485	ENSMUSP00000110129	TRANSLATION	protein_coding	-	CCDS50520.1	1	162	0	3.5	0.5	134.4	0	-4,-7	-	-	12	MINOR
ENSMUSG00000026981	Il1rn	ENSMUST00000143423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026981	Il1rn	ENSMUST00000114486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026981	Il1rn	ENSMUST00000114482	ENSMUSP00000110126	TRANSLATION	protein_coding	-	CCDS38064.1	1	178	0	3.5	5.1	134.4	0	3,-2	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000026981	Il1rn	ENSMUST00000114487	ENSMUSP00000110131	TRANSLATION	protein_coding	-	CCDS15736.1	1	159	0	3.5	6.3	134.4	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000037708	Spag6	ENSMUST00000095132	ENSMUSP00000092751	TRANSLATION	protein_coding	-	CCDS38051.1	1	509	0	6.26	17.5	130.6	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000037708	Spag6	ENSMUST00000137796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037708	Spag6	ENSMUST00000138017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037708	Spag6	ENSMUST00000173763	ENSMUSP00000133383	TRANSLATION	protein_coding	stop	-	3	167	0	2.92	0	34.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036805	Noxa1	ENSMUST00000114373	ENSMUSP00000110014	TRANSLATION	protein_coding	-	CCDS50524.1	1	436	0	6	1.5	64.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036805	Noxa1	ENSMUST00000044018	ENSMUSP00000037423	TRANSLATION	protein_coding	-	CCDS15749.1	1	444	0	6	1.5	64.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000038116	Phf20	ENSMUST00000037401	ENSMUSP00000043138	TRANSLATION	protein_coding	-	CCDS38297.1	1	1010	8	5.05	5.1	119	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000038116	Phf20	ENSMUST00000132352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038116	Phf20	ENSMUST00000132129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038116	Phf20	ENSMUST00000153822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038116	Phf20	ENSMUST00000135796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038116	Phf20	ENSMUST00000145731	ENSMUSP00000119756	TRANSLATION	protein_coding	stop	-	3	113	0	2.5	0	25.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038116	Phf20	ENSMUST00000131479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038116	Phf20	ENSMUST00000147242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038116	Phf20	ENSMUST00000122814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038116	Phf20	ENSMUST00000152617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038116	Phf20	ENSMUST00000147234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027356	Fermt1	ENSMUST00000144342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027356	Fermt1	ENSMUST00000143981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027356	Fermt1	ENSMUST00000134937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027356	Fermt1	ENSMUST00000038280	ENSMUSP00000047616	TRANSLATION	protein_coding	-	CCDS38248.1	5	677	0	7.86	8.8	187.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050447	Lypd6	ENSMUST00000128451	ENSMUSP00000116803	TRANSLATION	protein_coding	stop	-	5	123	2	0	0	139.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050447	Lypd6	ENSMUST00000126337	ENSMUSP00000119755	TRANSLATION	protein_coding	stop	-	2	70	2	0	0	55	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050447	Lypd6	ENSMUST00000053208	ENSMUSP00000061578	TRANSLATION	protein_coding	-	CCDS16026.1	1	171	2	0	6.4	177.9	0	3,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000050447	Lypd6	ENSMUST00000169232	ENSMUSP00000131002	TRANSLATION	protein_coding	-	CCDS16026.1	1	171	2	0	6.4	177.9	0	3,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000050447	Lypd6	ENSMUST00000112712	ENSMUSP00000108332	TRANSLATION	protein_coding	-	CCDS16026.1	5	171	2	0	6.4	177.9	0	3,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000027175	Tcp11l1	ENSMUST00000132600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027175	Tcp11l1	ENSMUST00000137428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027175	Tcp11l1	ENSMUST00000129571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027175	Tcp11l1	ENSMUST00000126310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027175	Tcp11l1	ENSMUST00000111118	ENSMUSP00000106747	TRANSLATION	protein_coding	-	CCDS16491.1	5	509	0	0	1.5	352.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027175	Tcp11l1	ENSMUST00000129792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027175	Tcp11l1	ENSMUST00000028597	ENSMUSP00000028597	TRANSLATION	protein_coding	-	CCDS16491.1	1	509	0	0	1.5	352.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000194	Gpr107	ENSMUST00000149622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000194	Gpr107	ENSMUST00000133207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000194	Gpr107	ENSMUST00000147099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000194084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000127872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000172422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000056433	ENSMUSP00000056739	TRANSLATION	protein_coding	-	CCDS15895.1	1	551	0	0	0.5	329.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000000194	Gpr107	ENSMUST00000151991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000194	Gpr107	ENSMUST00000169333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000146747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000194	Gpr107	ENSMUST00000153032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026925	Inpp5e	ENSMUST00000028291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026925	Inpp5e	ENSMUST00000145701	ENSMUSP00000119485	TRANSLATION	protein_coding	-	CCDS15805.1	1	647	0	10.36	1.5	34.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000026925	Inpp5e	ENSMUST00000150907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026925	Inpp5e	ENSMUST00000114090	ENSMUSP00000109724	TRANSLATION	protein_coding	-	CCDS71007.1	1	605	0	9.41	0.5	34.7	0	-4,-6	-	-	10.098	MINOR
ENSMUSG00000026925	Inpp5e	ENSMUST00000144011	ENSMUSP00000123272	TRANSLATION	protein_coding	start/stop	-	5	206	0	5.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026925	Inpp5e	ENSMUST00000131109	ENSMUSP00000118739	TRANSLATION	protein_coding	start	-	3	126	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026925	Inpp5e	ENSMUST00000146061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015093	Clic3	ENSMUST00000102918	ENSMUSP00000099982	TRANSLATION	protein_coding	-	-	3	235	15	5.264	6.3	75.3	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000015093	Clic3	ENSMUST00000142006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015093	Clic3	ENSMUST00000114265	ENSMUSP00000109904	TRANSLATION	protein_coding	-	CCDS15774.1	1	237	14	5.264	6.3	75.3	0	-4,-7	-	-	19.334	PRINCIPAL:2
ENSMUSG00000015093	Clic3	ENSMUST00000143862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015093	Clic3	ENSMUST00000132311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015093	Clic3	ENSMUST00000140022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027570	Col9a3	ENSMUST00000129090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027570	Col9a3	ENSMUST00000103059	ENSMUSP00000099348	TRANSLATION	protein_coding	-	CCDS17180.1	1	680	0	15.675	0.5	148.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027570	Col9a3	ENSMUST00000165879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027570	Col9a3	ENSMUST00000141056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027570	Col9a3	ENSMUST00000132527	ENSMUSP00000128718	TRANSLATION	protein_coding	-	CCDS17180.1	5	680	0	15.675	0.5	148.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027570	Col9a3	ENSMUST00000165224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058884	Olfr1025-ps1	ENSMUST00000213474	ENSMUSP00000149785	TRANSLATION	protein_coding	-	-	5	312	0	0.36	3.4	193.6	5	-3,-5	-	-	12.906	PRINCIPAL:1
ENSMUSG00000058884	Olfr1025-ps1	ENSMUST00000188749	ENSMUSP00000139860	TRANSLATION	protein_coding	stop	-	-	307	0	0.36	6.3	193.6	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000033705	Stard9	ENSMUST00000154193	ENSMUSP00000116900	TRANSLATION	nonsense_mediated_decay	start	-	2	785	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033705	Stard9	ENSMUST00000070420	ENSMUSP00000070111	TRANSLATION	nonsense_mediated_decay	start	-	1	785	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033705	Stard9	ENSMUST00000180041	ENSMUSP00000136055	TRANSLATION	protein_coding	-	-	5	4561	11	9.54	0	362.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000033705	Stard9	ENSMUST00000141917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033705	Stard9	ENSMUST00000140843	ENSMUSP00000117178	TRANSLATION	nonsense_mediated_decay	-	-	5	450	11	9.54	0	338.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033705	Stard9	ENSMUST00000129384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033705	Stard9	ENSMUST00000229722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027452	Acss1	ENSMUST00000147135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027452	Acss1	ENSMUST00000141500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027452	Acss1	ENSMUST00000028944	ENSMUSP00000028944	TRANSLATION	protein_coding	-	CCDS16859.1	1	682	17	12.83	1.5	434.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000027452	Acss1	ENSMUST00000154328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027452	Acss1	ENSMUST00000141785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053146	Olfr352	ENSMUST00000065416	ENSMUSP00000070758	TRANSLATION	protein_coding	-	CCDS15985.1	-	315	0	0.42	1.5	190.4	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000053146	Olfr352	ENSMUST00000217325	ENSMUSP00000149568	TRANSLATION	protein_coding	-	CCDS15985.1	5	315	0	0.42	1.5	190.4	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000090485	Gm17416	ENSMUST00000163724	ENSMUSP00000126447	TRANSLATION	protein_coding	start	-	-	66	0	0	0	37.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090485	Gm17416	ENSMUST00000238204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090485	Gm17416	ENSMUST00000238626	ENSMUSP00000158829	TRANSLATION	protein_coding	-	-	-	87	0	0	0	37.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000068134	Zfp120	ENSMUST00000122859	ENSMUSP00000114205	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	1.45	1	82.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000068134	Zfp120	ENSMUST00000142792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068134	Zfp120	ENSMUST00000094538	ENSMUSP00000092116	TRANSLATION	protein_coding	-	-	5	414	39	2.04	0	264.5	0	0,-3	-	-	16.914	ALTERNATIVE:2
ENSMUSG00000068134	Zfp120	ENSMUST00000109931	ENSMUSP00000105557	TRANSLATION	protein_coding	-	CCDS38264.1	1	130	0	1	1.5	82.9	0	0,-3	-	-	2.412	MINOR
ENSMUSG00000068134	Zfp120	ENSMUST00000089207	ENSMUSP00000086615	TRANSLATION	protein_coding	-	CCDS38263.1	1	436	39	2.49	1.5	264.5	0	0,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000027420	Bfsp1	ENSMUST00000028907	ENSMUSP00000028907	TRANSLATION	protein_coding	-	CCDS16811.1	1	663	0	0	1.5	41.4	0	-4,-2	-	-	5.682	PRINCIPAL:3
ENSMUSG00000027420	Bfsp1	ENSMUST00000099296	ENSMUSP00000096899	TRANSLATION	protein_coding	-	CCDS71154.1	1	669	0	0	0.5	43.7	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000026676	Ccdc3	ENSMUST00000027988	ENSMUSP00000027988	TRANSLATION	protein_coding	-	CCDS15664.1	1	273	0	0	0.5	0	0	3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000057738	Sptan1	ENSMUST00000202844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000100225	ENSMUSP00000097797	TRANSLATION	protein_coding	-	CCDS50558.1	1	2477	7	34.9532	8.4	1847.8	0	-4,-5	-	-	19.824	PRINCIPAL:2
ENSMUSG00000057738	Sptan1	ENSMUST00000201758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000152453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000095083	ENSMUSP00000092697	TRANSLATION	protein_coding	-	-	5	2472	7	34.9532	5.9	1860.4	0	-4,-5	-	-	19.71	ALTERNATIVE:1
ENSMUSG00000057738	Sptan1	ENSMUST00000113717	ENSMUSP00000109346	TRANSLATION	protein_coding	-	CCDS50559.1	1	2457	7	34.9532	5.2	1847.8	0	-4,-5	-	-	18.708	MINOR
ENSMUSG00000057738	Sptan1	ENSMUST00000143918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000113741	ENSMUSP00000109370	TRANSLATION	protein_coding	stop	-	5	219	0	4	0	144.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057738	Sptan1	ENSMUST00000149038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000113719	ENSMUSP00000109348	TRANSLATION	protein_coding	-	-	5	2478	7	34.5782	5.9	1822.4	0	-4,-5	-	-	16.68	MINOR
ENSMUSG00000057738	Sptan1	ENSMUST00000124494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000238871	ENSMUSP00000159182	TRANSLATION	protein_coding	start/stop	-	-	112	0	1.625	0	27.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057738	Sptan1	ENSMUST00000202286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000149846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000131827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057738	Sptan1	ENSMUST00000046257	ENSMUSP00000047792	TRANSLATION	protein_coding	-	-	5	2452	7	34.9532	5.9	1860.4	0	-4,-5	-	-	19.71	ALTERNATIVE:1
ENSMUSG00000057738	Sptan1	ENSMUST00000129241	ENSMUSP00000121116	TRANSLATION	protein_coding	-	CCDS38094.2	5	2498	7	34.5782	9.6	1822.4	0	-4,-5	-	-	17.97	MINOR
ENSMUSG00000061875	Olfr1148	ENSMUST00000215230	ENSMUSP00000149438	TRANSLATION	protein_coding	-	CCDS16311.1	5	314	0	0.36	1.5	182.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061875	Olfr1148	ENSMUST00000077580	ENSMUSP00000076778	TRANSLATION	protein_coding	-	CCDS16311.1	-	314	0	0.36	1.5	182.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027376	Prom2	ENSMUST00000103214	ENSMUSP00000099503	TRANSLATION	protein_coding	-	CCDS50704.1	1	821	0	0	0.5	939.3	6	1,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000027376	Prom2	ENSMUST00000140156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027376	Prom2	ENSMUST00000155581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027376	Prom2	ENSMUST00000028855	ENSMUSP00000028855	TRANSLATION	protein_coding	-	CCDS16704.1	1	835	0	0	1.5	939.3	6	1,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000002104	Rapsn	ENSMUST00000128008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002104	Rapsn	ENSMUST00000111446	ENSMUSP00000107073	TRANSLATION	protein_coding	-	-	1	359	0	2.64	2.2	168	0	-4,-5	-	-	10.672	MINOR
ENSMUSG00000002104	Rapsn	ENSMUST00000050323	ENSMUSP00000054150	TRANSLATION	protein_coding	-	CCDS16422.1	1	412	0	3.12	13	180.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002104	Rapsn	ENSMUST00000111445	ENSMUSP00000107072	TRANSLATION	protein_coding	-	-	5	353	0	2.12	2.4	180.8	0	-4,-5	-	-	10.47	MINOR
ENSMUSG00000037761	Actr5	ENSMUST00000045644	ENSMUSP00000046658	TRANSLATION	protein_coding	-	CCDS38310.1	1	608	19	1.58	1.5	152.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037761	Actr5	ENSMUST00000142531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037761	Actr5	ENSMUST00000183731	ENSMUSP00000139110	TRANSLATION	nonsense_mediated_decay	-	-	1	401	13	1.58	0	74.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037761	Actr5	ENSMUST00000125390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037761	Actr5	ENSMUST00000183586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027012	Dync1i2	ENSMUST00000112140	ENSMUSP00000107768	TRANSLATION	protein_coding	-	CCDS84536.1	5	638	0	4.08	5.1	70.6	0	-4,-5	-	-	13.893	MINOR
ENSMUSG00000027012	Dync1i2	ENSMUST00000112139	ENSMUSP00000107767	TRANSLATION	protein_coding	-	-	5	611	0	4.08	7.5	70.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000027012	Dync1i2	ENSMUST00000112136	ENSMUSP00000107764	TRANSLATION	protein_coding	-	-	5	637	0	4.08	5.1	70.6	0	-4,-5	-	-	13.893	MINOR
ENSMUSG00000027012	Dync1i2	ENSMUST00000081710	ENSMUSP00000080410	TRANSLATION	protein_coding	-	CCDS16112.1	1	612	0	4.08	7.5	70.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000027012	Dync1i2	ENSMUST00000137683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027012	Dync1i2	ENSMUST00000112142	ENSMUSP00000107770	TRANSLATION	protein_coding	-	CCDS57175.1	1	632	0	4.08	6.3	70.6	0	-4,-5	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000027012	Dync1i2	ENSMUST00000112138	ENSMUSP00000107766	TRANSLATION	protein_coding	-	CCDS16112.1	1	612	0	4.08	7.5	70.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000027012	Dync1i2	ENSMUST00000112144	ENSMUSP00000107772	TRANSLATION	protein_coding	-	CCDS84536.1	5	638	0	4.08	5.1	70.6	0	-4,-5	-	-	13.893	MINOR
ENSMUSG00000027012	Dync1i2	ENSMUST00000149735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027012	Dync1i2	ENSMUST00000141619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027012	Dync1i2	ENSMUST00000138613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027012	Dync1i2	ENSMUST00000100028	ENSMUSP00000097605	TRANSLATION	protein_coding	-	CCDS57175.1	5	632	0	4.08	6.3	70.6	0	-4,-5	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000027305	Ndufaf1	ENSMUST00000028768	ENSMUSP00000028768	TRANSLATION	protein_coding	-	CCDS38207.1	1	330	0	0	1.5	162.9	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000027305	Ndufaf1	ENSMUST00000154127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027305	Ndufaf1	ENSMUST00000110802	ENSMUSP00000106426	TRANSLATION	protein_coding	-	-	1	328	0	0	1.5	162.9	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000027305	Ndufaf1	ENSMUST00000131596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027305	Ndufaf1	ENSMUST00000110801	ENSMUSP00000106425	TRANSLATION	protein_coding	-	-	1	328	0	0	1.5	162.9	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000091312	Gm17490	ENSMUST00000166779	ENSMUSP00000129188	TRANSLATION	protein_coding	stop	-	5	21	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000001823	Hoxd12	ENSMUST00000001878	ENSMUSP00000001878	TRANSLATION	protein_coding	-	CCDS38147.1	1	268	0	1	1.5	67.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075249	Fsip2	ENSMUST00000136202	ENSMUSP00000114196	TRANSLATION	nonsense_mediated_decay	start	-	5	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075249	Fsip2	ENSMUST00000132967	ENSMUSP00000122350	TRANSLATION	nonsense_mediated_decay	start	-	5	1009	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075249	Fsip2	ENSMUST00000143764	ENSMUSP00000120314	TRANSLATION	protein_coding	-	-	5	6995	0	0	0.5	1652.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075179	Olfr1079	ENSMUST00000216480	ENSMUSP00000151072	TRANSLATION	protein_coding	-	-	5	313	0	0.42	3.9	164	5	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000075179	Olfr1079	ENSMUST00000111582	ENSMUSP00000107208	TRANSLATION	protein_coding	-	-	3	313	0	0.42	3.9	164	5	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000075179	Olfr1079	ENSMUST00000099882	ENSMUSP00000097467	TRANSLATION	protein_coding	-	CCDS16260.1	-	315	0	0.42	3.9	164	5	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000101480	Olfr1220	ENSMUST00000099806	ENSMUSP00000097394	TRANSLATION	protein_coding	-	CCDS16365.1	3	311	0	0.2	2.7	159.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000101480	Olfr1220	ENSMUST00000099789	ENSMUSP00000097377	TRANSLATION	protein_coding	-	CCDS16365.1	-	311	0	0.2	2.7	159.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000101480	Olfr1220	ENSMUST00000213288	ENSMUSP00000150812	TRANSLATION	protein_coding	-	CCDS16365.1	5	311	0	0.2	2.7	159.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111693	ENSMUSP00000107322	TRANSLATION	protein_coding	-	-	5	932	0	10.84	6.3	104.8	0	-4,-5	-	-	14.013	ALTERNATIVE:1
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111690	ENSMUSP00000107319	TRANSLATION	protein_coding	-	-	5	878	0	10.84	2.4	104.8	0	-4,-7	-	-	12.513	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000145312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111685	ENSMUSP00000107314	TRANSLATION	protein_coding	-	-	5	892	0	10.1032	0	104.8	0	-4,-7	-	-	10.5	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111696	ENSMUSP00000107325	TRANSLATION	protein_coding	-	-	5	940	0	10.09	3.9	104.8	0	-4,-5	-	-	11.592	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111698	ENSMUSP00000107327	TRANSLATION	protein_coding	-	-	5	868	0	10.84	0	104.8	0	-4,-5	-	-	11.976	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111688	ENSMUSP00000107317	TRANSLATION	protein_coding	-	-	5	878	0	10.84	2.4	104.8	0	-4,-7	-	-	12.513	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111697	ENSMUSP00000107326	TRANSLATION	protein_coding	-	CCDS50623.1	5	917	0	10.1032	4.1	104.8	0	-4,-5	-	-	11.691	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111676	ENSMUSP00000107305	TRANSLATION	protein_coding	-	-	5	860	0	10.84	2.4	104.8	0	-4,-5	-	-	12.513	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000126092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000149317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111678	ENSMUSP00000107307	TRANSLATION	protein_coding	-	-	5	866	0	10.8532	5.1	104.8	0	-4,-5	-	-	13.578	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111670	ENSMUSP00000107299	TRANSLATION	protein_coding	-	CCDS50621.1	1	830	0	10.84	1.7	104.8	0	-4,-5	-	-	12.246	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000131926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111684	ENSMUSP00000107313	TRANSLATION	protein_coding	-	-	5	913	0	10.8532	1.2	104.8	0	-4,-7	-	-	12.078	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111694	ENSMUSP00000107323	TRANSLATION	protein_coding	-	-	5	967	0	10.8532	6.4	104.8	0	-4,-5	-	-	14.076	ALTERNATIVE:1
ENSMUSG00000034101	Ctnnd1	ENSMUST00000066177	ENSMUSP00000065252	TRANSLATION	protein_coding	-	CCDS50622.1	1	911	0	10.09	2.9	104.8	0	-4,-5	-	-	11.208	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111686	ENSMUSP00000107315	TRANSLATION	protein_coding	-	-	5	878	0	10.84	2.4	104.8	0	-4,-7	-	-	12.513	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111687	ENSMUSP00000107316	TRANSLATION	protein_coding	-	-	5	907	0	10.84	1.2	104.8	0	-4,-7	-	-	12.054	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111675	ENSMUSP00000107304	TRANSLATION	protein_coding	-	-	5	609	0	10.84	0	104.8	0	-4,-5	-	-	11.976	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111689	ENSMUSP00000107318	TRANSLATION	protein_coding	-	-	5	884	0	10.8532	2.4	104.8	0	-4,-7	-	-	12.537	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000141151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000036811	ENSMUSP00000042543	TRANSLATION	protein_coding	-	CCDS50623.1	1	917	0	10.1032	4.1	104.8	0	-4,-5	-	-	11.691	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111691	ENSMUSP00000107320	TRANSLATION	protein_coding	-	CCDS16186.1	1	938	0	10.8532	8.8	104.8	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111692	ENSMUSP00000107321	TRANSLATION	protein_coding	-	-	5	932	0	10.84	6.3	104.8	0	-4,-5	-	-	14.013	ALTERNATIVE:1
ENSMUSG00000034101	Ctnnd1	ENSMUST00000099941	ENSMUSP00000097524	TRANSLATION	protein_coding	-	-	5	837	0	10.8532	2.4	104.8	0	-4,-5	-	-	12.537	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111695	ENSMUSP00000107324	TRANSLATION	protein_coding	-	-	5	961	0	10.84	7.6	104.8	0	-4,-5	-	-	14.514	ALTERNATIVE:1
ENSMUSG00000034101	Ctnnd1	ENSMUST00000111677	ENSMUSP00000107306	TRANSLATION	protein_coding	-	-	5	839	0	10.09	1.2	104.8	0	-4,-5	-	-	10.554	MINOR
ENSMUSG00000034101	Ctnnd1	ENSMUST00000150940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034101	Ctnnd1	ENSMUST00000067232	ENSMUSP00000064518	TRANSLATION	protein_coding	-	CCDS16186.1	1	938	0	10.8532	8.8	104.8	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000078998	Bpifa6	ENSMUST00000109753	ENSMUSP00000105375	TRANSLATION	protein_coding	-	CCDS50760.1	1	367	0	0	0.5	29.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000044405	Adig	ENSMUST00000148187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044405	Adig	ENSMUST00000059889	ENSMUSP00000051732	TRANSLATION	protein_coding	-	CCDS16990.1	1	80	0	0	1.5	145.9	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044405	Adig	ENSMUST00000109484	ENSMUSP00000105110	TRANSLATION	protein_coding	-	-	2	56	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000047039	Olfr1151	ENSMUST00000217376	ENSMUSP00000151107	TRANSLATION	protein_coding	-	CCDS16312.1	5	308	0	0	8.8	152.6	4	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000047039	Olfr1151	ENSMUST00000061081	ENSMUSP00000055394	TRANSLATION	protein_coding	-	CCDS16312.1	-	308	0	0	8.8	152.6	4	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000075144	Olfr1156	ENSMUST00000216191	ENSMUSP00000151183	TRANSLATION	protein_coding	-	CCDS38176.1	5	323	0	0	0.5	158.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075144	Olfr1156	ENSMUST00000099842	ENSMUSP00000097430	TRANSLATION	protein_coding	-	CCDS38176.1	-	323	0	0	0.5	158.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075144	Olfr1156	ENSMUST00000216726	ENSMUSP00000149665	TRANSLATION	protein_coding	-	CCDS38176.1	5	323	0	0	0.5	158.4	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079442	St6galnac4	ENSMUST00000179989	ENSMUSP00000136093	TRANSLATION	protein_coding	-	CCDS15921.1	1	302	9	1.76	5.1	121.3	0	1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000079442	St6galnac4	ENSMUST00000146557	ENSMUSP00000141249	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079442	St6galnac4	ENSMUST00000123080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079442	St6galnac4	ENSMUST00000102818	ENSMUSP00000099882	TRANSLATION	protein_coding	-	CCDS15921.1	1	302	9	1.76	5.1	121.3	0	1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000079442	St6galnac4	ENSMUST00000192934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027048	Abcb11	ENSMUST00000102709	ENSMUSP00000099770	TRANSLATION	protein_coding	-	CCDS16090.1	5	1321	0	20.761	2.7	669.6	6	-4,-5	-	-	11.736	PRINCIPAL:2
ENSMUSG00000027048	Abcb11	ENSMUST00000102710	ENSMUSP00000099771	TRANSLATION	protein_coding	-	CCDS16090.1	1	1321	0	20.761	2.7	669.6	6	-4,-5	-	-	11.736	PRINCIPAL:2
ENSMUSG00000027048	Abcb11	ENSMUST00000180142	ENSMUSP00000137017	TRANSLATION	protein_coding	-	-	5	1321	0	20.893	2.7	669.6	6	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027048	Abcb11	ENSMUST00000133663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075223	Olfr987	ENSMUST00000099929	ENSMUSP00000097513	TRANSLATION	protein_coding	-	CCDS16203.1	-	309	0	0.36	7.5	170.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075223	Olfr987	ENSMUST00000216347	ENSMUSP00000150619	TRANSLATION	protein_coding	-	CCDS16203.1	5	309	0	0.36	7.5	170.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075223	Olfr987	ENSMUST00000111598	ENSMUSP00000107225	TRANSLATION	protein_coding	-	CCDS16203.1	3	309	0	0.36	7.5	170.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000061531	Tmem236	ENSMUST00000077517	ENSMUSP00000076722	TRANSLATION	protein_coding	-	CCDS38049.1	1	344	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000015488	Cacfd1	ENSMUST00000145290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015488	Cacfd1	ENSMUST00000114003	ENSMUSP00000109636	TRANSLATION	protein_coding	-	-	3	109	0	0	1.2	81.5	3	-2,-5	-	-	4.61	MINOR
ENSMUSG00000015488	Cacfd1	ENSMUST00000133126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015488	Cacfd1	ENSMUST00000114004	ENSMUSP00000109637	TRANSLATION	protein_coding	-	CCDS57161.1	1	106	0	0	0.5	74.3	3	-4,-7	-	-	4.08	MINOR
ENSMUSG00000015488	Cacfd1	ENSMUST00000133807	ENSMUSP00000122562	TRANSLATION	protein_coding	start	-	1	118	0	0	0	65.9	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000015488	Cacfd1	ENSMUST00000114007	ENSMUSP00000109640	TRANSLATION	protein_coding	-	CCDS38086.1	1	171	0	0	5.1	106.3	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000015488	Cacfd1	ENSMUST00000114005	ENSMUSP00000109638	TRANSLATION	protein_coding	-	CCDS57160.1	1	128	0	0	0.5	74.3	3	-4,-7	-	-	4.08	MINOR
ENSMUSG00000015488	Cacfd1	ENSMUST00000114006	ENSMUSP00000109639	TRANSLATION	protein_coding	-	CCDS38086.1	1	171	0	0	5.1	106.3	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000009216	Fam163b	ENSMUST00000151224	ENSMUSP00000127556	TRANSLATION	protein_coding	-	CCDS38087.1	1	167	0	0	6.3	212.5	0	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000111689	Olfr1082	ENSMUST00000215600	ENSMUSP00000150706	TRANSLATION	protein_coding	-	CCDS38172.1	3	313	0	0.24	7.5	159.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075387	Olfr341	ENSMUST00000100154	ENSMUSP00000097731	TRANSLATION	protein_coding	-	CCDS15974.1	-	313	0	0.48	1.5	200	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075387	Olfr341	ENSMUST00000213300	ENSMUSP00000150801	TRANSLATION	protein_coding	-	CCDS15974.1	5	313	0	0.48	1.5	200	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038831	Ralgps1	ENSMUST00000113165	ENSMUSP00000108790	TRANSLATION	protein_coding	-	-	5	557	0	12.18	3.6	216.2	0	-2,-5	-	-	12.918	MINOR
ENSMUSG00000038831	Ralgps1	ENSMUST00000138704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038831	Ralgps1	ENSMUST00000042615	ENSMUSP00000048451	TRANSLATION	protein_coding	-	CCDS71031.1	1	497	0	11.68	0.5	191.5	0	-2,-5	-	-	9.516	MINOR
ENSMUSG00000038831	Ralgps1	ENSMUST00000131298	ENSMUSP00000118363	TRANSLATION	protein_coding	-	CCDS79779.1	1	515	0	12.18	7.5	216.2	0	-2,-5	-	-	14.295	ALTERNATIVE:1
ENSMUSG00000038831	Ralgps1	ENSMUST00000091039	ENSMUSP00000088563	TRANSLATION	protein_coding	-	CCDS15939.1	1	585	0	12.18	9.5	216.2	0	-2,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000038831	Ralgps1	ENSMUST00000113164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026917	Wdr5	ENSMUST00000140396	ENSMUSP00000121654	TRANSLATION	protein_coding	start	-	5	281	0	8.2	0	178.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026917	Wdr5	ENSMUST00000144315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026917	Wdr5	ENSMUST00000113952	ENSMUSP00000109585	TRANSLATION	protein_coding	-	CCDS15829.1	1	334	0	10.16	19.5	217.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026917	Wdr5	ENSMUST00000125088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023393	Slc17a9	ENSMUST00000139817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023393	Slc17a9	ENSMUST00000140955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023393	Slc17a9	ENSMUST00000154882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023393	Slc17a9	ENSMUST00000094218	ENSMUSP00000091771	TRANSLATION	protein_coding	-	CCDS38378.1	5	447	0	0	1.5	176.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000023393	Slc17a9	ENSMUST00000151882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017144	Rnd3	ENSMUST00000154545	ENSMUSP00000128831	TRANSLATION	protein_coding	-	-	1	202	17	4	0	123.5	0	-4,-6	-	-	12.432	MINOR
ENSMUSG00000017144	Rnd3	ENSMUST00000140864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017144	Rnd3	ENSMUST00000017288	ENSMUSP00000017288	TRANSLATION	protein_coding	-	CCDS16028.1	1	244	20	5	17.5	149.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000043267	Olfr1031	ENSMUST00000050942	ENSMUSP00000059256	TRANSLATION	protein_coding	-	CCDS16232.1	-	336	0	0.24	0.5	187.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043267	Olfr1031	ENSMUST00000216807	ENSMUSP00000149225	TRANSLATION	protein_coding	-	CCDS16232.1	5	336	0	0.24	0.5	187.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095586	Olfr1287	ENSMUST00000075390	ENSMUSP00000074850	TRANSLATION	protein_coding	-	CCDS16526.1	-	305	0	0.36	6.3	161.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027416	Otor	ENSMUST00000028902	ENSMUSP00000028902	TRANSLATION	protein_coding	-	CCDS16809.1	1	128	0	2.43	7.5	51.4	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000057735	Olfr1185-ps1	ENSMUST00000075025	ENSMUSP00000074542	TRANSLATION	protein_coding	-	-	5	303	0	0.36	6.4	163.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000090213	Tmem189	ENSMUST00000125874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090213	Tmem189	ENSMUST00000148262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090213	Tmem189	ENSMUST00000006587	ENSMUSP00000006587	TRANSLATION	protein_coding	-	CCDS17104.1	1	271	0	0	7.5	258.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000090213	Tmem189	ENSMUST00000142148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027220	Syt13	ENSMUST00000028648	ENSMUSP00000028648	TRANSLATION	protein_coding	-	CCDS16451.1	1	426	4	3.64	7.5	72.8	0	0,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000068614	Actc1	ENSMUST00000090269	ENSMUSP00000087736	TRANSLATION	protein_coding	-	CCDS16564.1	1	377	24	6	21.5	499	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000068614	Actc1	ENSMUST00000149125	ENSMUSP00000123370	TRANSLATION	protein_coding	stop	-	3	43	6	1	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026797	Stxbp1	ENSMUST00000077458	ENSMUSP00000089051	TRANSLATION	protein_coding	-	CCDS50572.1	1	603	0	16.08	14.3	445.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026797	Stxbp1	ENSMUST00000050000	ENSMUSP00000052440	TRANSLATION	protein_coding	-	CCDS15933.1	1	594	0	15.83	11.8	443.6	0	-4,-5	-	-	14.654	MINOR
ENSMUSG00000026797	Stxbp1	ENSMUST00000192333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026797	Stxbp1	ENSMUST00000208840	ENSMUSP00000146437	TRANSLATION	protein_coding	stop	-	5	100	0	3	0	77.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026797	Stxbp1	ENSMUST00000113222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027115	Kif18a	ENSMUST00000028527	ENSMUSP00000028527	TRANSLATION	protein_coding	-	CCDS16507.1	1	886	11	6.09	0.5	387.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027115	Kif18a	ENSMUST00000162515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027115	Kif18a	ENSMUST00000130137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027115	Kif18a	ENSMUST00000151395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027115	Kif18a	ENSMUST00000144924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027115	Kif18a	ENSMUST00000152751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089756	Zfp966	ENSMUST00000109018	ENSMUSP00000104646	TRANSLATION	protein_coding	-	CCDS50824.1	3	138	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000089756	Zfp966	ENSMUST00000108949	ENSMUSP00000104577	TRANSLATION	protein_coding	-	CCDS50825.1	3	485	53	2.05	0.5	312.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000017999	Ddx27	ENSMUST00000176066	ENSMUSP00000135815	TRANSLATION	protein_coding	stop	-	5	310	11	2.6	0	62.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017999	Ddx27	ENSMUST00000150571	ENSMUSP00000135265	TRANSLATION	protein_coding	-	-	1	292	11	2.93	0	67.3	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000017999	Ddx27	ENSMUST00000138969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017999	Ddx27	ENSMUST00000018143	ENSMUSP00000018143	TRANSLATION	protein_coding	-	CCDS38336.1	1	760	14	8.44	1.7	250.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017999	Ddx27	ENSMUST00000127468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017999	Ddx27	ENSMUST00000126409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091337	Eid1	ENSMUST00000164756	ENSMUSP00000129413	TRANSLATION	protein_coding	-	CCDS50696.1	-	159	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027560	Dok5	ENSMUST00000029075	ENSMUSP00000029075	TRANSLATION	protein_coding	-	CCDS17125.1	1	306	0	2.2	13.8	99	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000045148	Olfr1255	ENSMUST00000214508	ENSMUSP00000150299	TRANSLATION	protein_coding	-	-	5	304	0	0.4	5.9	147.3	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000045148	Olfr1255	ENSMUST00000057369	ENSMUSP00000060602	TRANSLATION	protein_coding	-	CCDS16393.1	-	310	0	0.4	0.5	147.3	4	-4,-7	-	-	12	MINOR
ENSMUSG00000098950	Gm28036	ENSMUST00000184899	ENSMUSP00000139177	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	69	0	1.2	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000162612	ENSMUSP00000125190	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	164	0	3.2	0	0	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000183972	ENSMUSP00000138995	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	48	0	1	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000183518	ENSMUSP00000139010	TRANSLATION	protein_coding,RT	stop	-	3	54	0	0.7	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000127956	ENSMUSP00000114923	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	570	0	2.6	0	55.4	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000160165	ENSMUSP00000124858	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	68	0	0.75	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000159952	ENSMUSP00000124101	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	174	0	3.2	0	0	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098950	Gm28036	ENSMUST00000132494	ENSMUSP00000139175	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	658	0	3.8	0	55.4	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000074916	Chst14	ENSMUST00000099546	ENSMUSP00000099579	TRANSLATION	protein_coding	-	CCDS16587.1	-	376	0	0	6.3	182.5	1	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000074916	Chst14	ENSMUST00000110837	ENSMUSP00000106461	TRANSLATION	protein_coding	-	-	1	351	0	0	0	142.7	1	-4,-1	-	-	3.612	MINOR
ENSMUSG00000051177	Plcb1	ENSMUST00000131552	ENSMUSP00000118756	TRANSLATION	protein_coding	-	CCDS16787.1	1	1173	10	25.63	7.6	567.2	0	-4,-5	-	-	17.817	MINOR
ENSMUSG00000051177	Plcb1	ENSMUST00000070724	ENSMUSP00000064844	TRANSLATION	protein_coding	-	CCDS16787.1	1	1173	10	25.63	7.6	567.2	0	-4,-5	-	-	17.817	MINOR
ENSMUSG00000051177	Plcb1	ENSMUST00000201485	ENSMUSP00000144399	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051177	Plcb1	ENSMUST00000129382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051177	Plcb1	ENSMUST00000202531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051177	Plcb1	ENSMUST00000130524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051177	Plcb1	ENSMUST00000201524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051177	Plcb1	ENSMUST00000110116	ENSMUSP00000105743	TRANSLATION	protein_coding	-	CCDS50729.1	1	1216	10	25.91	9.2	601.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000074797	Itpa	ENSMUST00000138963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074797	Itpa	ENSMUST00000103193	ENSMUSP00000099482	TRANSLATION	protein_coding	-	CCDS16748.1	1	198	17	6.08	1.5	187	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074797	Itpa	ENSMUST00000126714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074797	Itpa	ENSMUST00000156382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074797	Itpa	ENSMUST00000133328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049057	Olfr1257	ENSMUST00000060795	ENSMUSP00000056439	TRANSLATION	protein_coding	-	CCDS16396.1	-	309	0	0.36	8.8	167.3	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049057	Olfr1257	ENSMUST00000111519	ENSMUSP00000107144	TRANSLATION	protein_coding	-	CCDS16396.1	2	309	0	0.36	8.8	167.3	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078865	Gm14406	ENSMUST00000108943	ENSMUSP00000104571	TRANSLATION	protein_coding	-	-	2	64	0	1.3	1.5	75.1	0	-4,-5	-	-	3.804	MINOR
ENSMUSG00000078865	Gm14406	ENSMUST00000108945	ENSMUSP00000104573	TRANSLATION	protein_coding	-	-	3	426	43	2.05	0	294.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074623	Gm826	ENSMUST00000138905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074623	Gm826	ENSMUST00000109475	ENSMUSP00000105101	TRANSLATION	protein_coding	-	-	2	86	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000074623	Gm826	ENSMUST00000099127	ENSMUSP00000096729	TRANSLATION	protein_coding	-	CCDS50789.1	1	109	0	0	0.5	0	0	-3,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000036202	Rif1	ENSMUST00000152178	ENSMUSP00000154009	TRANSLATION	protein_coding	start	-	1	535	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036202	Rif1	ENSMUST00000125376	ENSMUSP00000154538	TRANSLATION	protein_coding	start	-	1	731	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036202	Rif1	ENSMUST00000126218	ENSMUSP00000153998	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036202	Rif1	ENSMUST00000125322	ENSMUSP00000154086	TRANSLATION	nonsense_mediated_decay	start	-	1	740	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036202	Rif1	ENSMUST00000125116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036202	Rif1	ENSMUST00000112693	ENSMUSP00000108313	TRANSLATION	protein_coding	-	CCDS50583.1	5	2426	0	0	0.5	248.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036202	Rif1	ENSMUST00000145130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075156	Olfr1128	ENSMUST00000102624	ENSMUSP00000099684	TRANSLATION	protein_coding	-	CCDS16295.1	-	311	0	0	1.5	155.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010911	Apip	ENSMUST00000155004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010911	Apip	ENSMUST00000011055	ENSMUSP00000011055	TRANSLATION	protein_coding	-	CCDS16474.1	1	241	3	5.5	7.5	159.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000010911	Apip	ENSMUST00000147131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010911	Apip	ENSMUST00000124540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039001	Rps21	ENSMUST00000125301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039001	Rps21	ENSMUST00000148629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039001	Rps21	ENSMUST00000059080	ENSMUSP00000058432	TRANSLATION	protein_coding	-	CCDS38376.1	1	83	1	2.5	17.5	142.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039001	Rps21	ENSMUST00000145043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075136	Olfr1164	ENSMUST00000099834	ENSMUSP00000097422	TRANSLATION	protein_coding	-	CCDS16325.1	-	326	0	0	1.5	157.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026748	Plxdc2	ENSMUST00000114703	ENSMUSP00000110351	TRANSLATION	protein_coding	-	-	5	479	0	0	1.2	28.3	1	0,-4	-	-	6.078	MINOR
ENSMUSG00000026748	Plxdc2	ENSMUST00000126173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026748	Plxdc2	ENSMUST00000028081	ENSMUSP00000028081	TRANSLATION	protein_coding	-	CCDS15705.1	1	530	0	0	8.8	28.3	1	0,-4	-	-	9	PRINCIPAL:2
ENSMUSG00000026748	Plxdc2	ENSMUST00000114702	ENSMUSP00000110350	TRANSLATION	protein_coding	-	-	5	528	0	0	8.8	28.3	1	0,-4	-	-	9	ALTERNATIVE:1
ENSMUSG00000040132	Svs2	ENSMUST00000044953	ENSMUSP00000042389	TRANSLATION	protein_coding	-	CCDS17027.1	1	375	0	0	0.5	141.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000040132	Svs2	ENSMUST00000109374	ENSMUSP00000104999	TRANSLATION	protein_coding	-	CCDS17027.1	1	375	0	0	0.5	141.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000075105	Olfr1218	ENSMUST00000213609	ENSMUSP00000149558	TRANSLATION	protein_coding	-	CCDS16363.1	5	311	0	0.2	2.7	154.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075105	Olfr1218	ENSMUST00000215054	ENSMUSP00000149671	TRANSLATION	protein_coding	-	CCDS16363.1	5	311	0	0.2	2.7	154.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075105	Olfr1218	ENSMUST00000099798	ENSMUSP00000097386	TRANSLATION	protein_coding	-	CCDS16363.1	-	311	0	0.2	2.7	154.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075105	Olfr1218	ENSMUST00000215048	ENSMUSP00000149171	TRANSLATION	protein_coding	-	CCDS16363.1	5	311	0	0.2	2.7	154.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074946	Olfr1313	ENSMUST00000216071	ENSMUSP00000148886	TRANSLATION	protein_coding	-	CCDS16543.1	5	311	0	0.36	6.4	140.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074946	Olfr1313	ENSMUST00000213577	ENSMUSP00000149681	TRANSLATION	protein_coding	-	CCDS16543.1	5	311	0	0.36	6.4	140.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074946	Olfr1313	ENSMUST00000099599	ENSMUSP00000097194	TRANSLATION	protein_coding	-	CCDS16543.1	-	311	0	0.36	6.4	140.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027288	Zfp106	ENSMUST00000147353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027288	Zfp106	ENSMUST00000141874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027288	Zfp106	ENSMUST00000167241	ENSMUSP00000127803	TRANSLATION	protein_coding	start/stop	-	3	168	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027288	Zfp106	ENSMUST00000149210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027288	Zfp106	ENSMUST00000139942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027288	Zfp106	ENSMUST00000163384	ENSMUSP00000128291	TRANSLATION	nonsense_mediated_decay	start	-	2	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027288	Zfp106	ENSMUST00000152347	ENSMUSP00000132902	TRANSLATION	protein_coding	start/stop	-	5	264	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027288	Zfp106	ENSMUST00000130303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027288	Zfp106	ENSMUST00000171215	ENSMUSP00000128995	TRANSLATION	protein_coding	-	-	5	1865	3	5.02	0	35.6	0	-4,-5	-	-	14.574	MINOR
ENSMUSG00000027288	Zfp106	ENSMUST00000055241	ENSMUSP00000055602	TRANSLATION	protein_coding	-	CCDS16621.1	5	1888	7	5.02	0.5	35.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027288	Zfp106	ENSMUST00000135625	ENSMUSP00000126939	TRANSLATION	protein_coding	stop	-	2	151	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027403	Tgm6	ENSMUST00000140947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027403	Tgm6	ENSMUST00000147616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027403	Tgm6	ENSMUST00000028888	ENSMUSP00000028888	TRANSLATION	protein_coding	-	CCDS16734.1	1	706	11	11.16	2.7	306.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000184535	ENSMUSP00000138853	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000152961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000028800	ENSMUSP00000028800	TRANSLATION	protein_coding	-	CCDS79849.1	1	177	0	0	7.5	174.6	0	-4,-1	-	-	9	ALTERNATIVE:1
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000136838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000184121	ENSMUSP00000139314	TRANSLATION	nonsense_mediated_decay	-	-	3	50	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000133602	ENSMUSP00000115000	TRANSLATION	protein_coding	stop	-	5	141	0	0	0	113.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027327	1700037H04Rik	ENSMUST00000103188	ENSMUSP00000099477	TRANSLATION	protein_coding	-	CCDS16756.1	1	174	0	0	7.5	174.6	0	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000019188	H13	ENSMUST00000129439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019188	H13	ENSMUST00000079247	ENSMUSP00000078236	TRANSLATION	protein_coding	stop	-	5	347	0	0	0	256.8	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000019188	H13	ENSMUST00000148156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019188	H13	ENSMUST00000125366	ENSMUSP00000120068	TRANSLATION	protein_coding	-	CCDS16896.1	1	378	0	0	7.5	346.8	12	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000019188	H13	ENSMUST00000089059	ENSMUSP00000086460	TRANSLATION	protein_coding	-	CCDS50752.1	1	394	0	0	2.7	345.3	12	-4,-5	-	-	6.696	MINOR
ENSMUSG00000019188	H13	ENSMUST00000109825	ENSMUSP00000105450	TRANSLATION	protein_coding	-	CCDS50753.1	1	224	0	0	0.5	68.9	6	-4,-5	-	-	0	MINOR
ENSMUSG00000017858	Ift52	ENSMUST00000150396	ENSMUSP00000121943	TRANSLATION	protein_coding	stop	-	5	234	0	6.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017858	Ift52	ENSMUST00000125144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017858	Ift52	ENSMUST00000018002	ENSMUSP00000018002	TRANSLATION	protein_coding	-	CCDS17005.1	1	426	0	10	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017858	Ift52	ENSMUST00000152201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002728	Naa20	ENSMUST00000149461	ENSMUSP00000127918	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	1.394	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002728	Naa20	ENSMUST00000129502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002728	Naa20	ENSMUST00000110000	ENSMUSP00000105627	TRANSLATION	protein_coding	-	CCDS50735.1	1	178	22	4.104	21.5	55.8	0	-4,-5	-	-	21.868	PRINCIPAL:1
ENSMUSG00000002728	Naa20	ENSMUST00000150316	ENSMUSP00000127844	TRANSLATION	protein_coding	stop	-	5	48	12	1.33	0	28.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002728	Naa20	ENSMUST00000165635	ENSMUSP00000129127	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002728	Naa20	ENSMUST00000136330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002728	Naa20	ENSMUST00000169732	ENSMUSP00000132857	TRANSLATION	protein_coding	stop	-	5	111	12	2.856	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002728	Naa20	ENSMUST00000002805	ENSMUSP00000002805	TRANSLATION	protein_coding	-	CCDS16827.1	1	188	22	4.17	1.5	48	0	-4,-6	-	-	17.256	MINOR
ENSMUSG00000002728	Naa20	ENSMUST00000134759	ENSMUSP00000126280	TRANSLATION	protein_coding	-	-	2	61	0	0.73	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074735	Gm21994	ENSMUST00000063463	ENSMUSP00000075719	TRANSLATION	protein_coding	start	-	5	329	38	0.8	0	171	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000067847	Romo1	ENSMUST00000119950	ENSMUSP00000113943	TRANSLATION	protein_coding	-	CCDS38296.1	2	79	0	0	21.5	90.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000067847	Romo1	ENSMUST00000109597	ENSMUSP00000105226	TRANSLATION	protein_coding	-	CCDS38296.1	1	79	0	0	21.5	90.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000067847	Romo1	ENSMUST00000109598	ENSMUSP00000105227	TRANSLATION	protein_coding	-	CCDS38296.1	5	79	0	0	21.5	90.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000067847	Romo1	ENSMUST00000088610	ENSMUSP00000085981	TRANSLATION	protein_coding	-	CCDS38296.1	1	79	0	0	21.5	90.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000026857	Ntmt1	ENSMUST00000127566	ENSMUSP00000142189	TRANSLATION	protein_coding	stop	-	5	118	11	3.75	0	147.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026857	Ntmt1	ENSMUST00000128303	ENSMUSP00000123140	TRANSLATION	protein_coding	stop	-	3	78	8	2.5	0	96.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026857	Ntmt1	ENSMUST00000138889	ENSMUSP00000141905	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	1	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026857	Ntmt1	ENSMUST00000126037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026857	Ntmt1	ENSMUST00000041830	ENSMUSP00000035303	TRANSLATION	protein_coding	-	CCDS15886.1	1	223	20	5.83	17.5	322.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026857	Ntmt1	ENSMUST00000129712	ENSMUSP00000141222	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	1	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026857	Ntmt1	ENSMUST00000152374	ENSMUSP00000116760	TRANSLATION	protein_coding	stop	-	5	146	20	4.83	0	208.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026857	Ntmt1	ENSMUST00000128509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026857	Ntmt1	ENSMUST00000143970	ENSMUSP00000141900	TRANSLATION	protein_coding	start	-	3	144	20	4.5	0	192.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109219	Olfr1299	ENSMUST00000207228	ENSMUSP00000146528	TRANSLATION	protein_coding	-	CCDS38197.1	3	312	0	0.42	2.7	160.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109219	Olfr1299	ENSMUST00000213511	ENSMUSP00000149299	TRANSLATION	protein_coding	-	CCDS38197.1	5	312	0	0.42	2.7	160.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044628	Rnf208	ENSMUST00000114355	ENSMUSP00000109995	TRANSLATION	protein_coding	-	CCDS15757.2	-	265	8	0.2	2.7	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044628	Rnf208	ENSMUST00000060818	ENSMUSP00000057742	TRANSLATION	protein_coding	-	CCDS15757.2	1	265	8	0.2	2.7	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034075	Zdhhc5	ENSMUST00000138171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034075	Zdhhc5	ENSMUST00000035840	ENSMUSP00000048198	TRANSLATION	protein_coding	-	CCDS16190.1	1	715	3	0	8.8	122.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034075	Zdhhc5	ENSMUST00000125690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033808	Tmem87a	ENSMUST00000143182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033808	Tmem87a	ENSMUST00000136410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033808	Tmem87a	ENSMUST00000090042	ENSMUSP00000087496	TRANSLATION	protein_coding	-	CCDS50677.1	1	559	0	0	2.7	282.6	7	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000033808	Tmem87a	ENSMUST00000110729	ENSMUSP00000106357	TRANSLATION	protein_coding	-	-	1	500	0	0	0.5	276.3	8	2,-2	-	-	5.622	ALTERNATIVE:2
ENSMUSG00000033808	Tmem87a	ENSMUST00000090046	ENSMUSP00000087500	TRANSLATION	protein_coding	-	CCDS50678.1	1	560	0	0	2.7	276.3	8	2,-2	-	-	5.622	PRINCIPAL:4
ENSMUSG00000033808	Tmem87a	ENSMUST00000151740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033808	Tmem87a	ENSMUST00000124806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057047	1700010B08Rik	ENSMUST00000073081	ENSMUSP00000072830	TRANSLATION	protein_coding	-	CCDS50816.1	1	102	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027350	Chgb	ENSMUST00000028826	ENSMUSP00000028826	TRANSLATION	protein_coding	-	CCDS16777.1	1	677	0	0	0.5	780.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000027170	Eif3m	ENSMUST00000131266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027170	Eif3m	ENSMUST00000148476	ENSMUSP00000122339	TRANSLATION	protein_coding	start	-	3	143	0	4.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027170	Eif3m	ENSMUST00000028592	ENSMUSP00000028592	TRANSLATION	protein_coding	-	CCDS16495.1	1	374	0	9.75	19.5	56.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027170	Eif3m	ENSMUST00000111110	ENSMUSP00000106739	TRANSLATION	protein_coding	-	-	5	242	0	6.75	1.2	56.1	0	-4,-5	-	-	6.044	MINOR
ENSMUSG00000039536	Stau1	ENSMUST00000109236	ENSMUSP00000104859	TRANSLATION	protein_coding	-	CCDS17093.1	1	487	0	7.26	1.5	254.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039536	Stau1	ENSMUST00000134664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039536	Stau1	ENSMUST00000154506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039536	Stau1	ENSMUST00000130790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039536	Stau1	ENSMUST00000109235	ENSMUSP00000104858	TRANSLATION	protein_coding	-	CCDS50800.1	1	489	0	7.26	1.5	254.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039536	Stau1	ENSMUST00000130104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039536	Stau1	ENSMUST00000049412	ENSMUSP00000042626	TRANSLATION	protein_coding	-	CCDS71197.1	1	485	0	7.26	1.5	254.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039536	Stau1	ENSMUST00000109238	ENSMUSP00000104861	TRANSLATION	protein_coding	-	CCDS50801.1	1	495	0	7.095	1.5	243.7	0	-4,-7	-	-	11.046	MINOR
ENSMUSG00000039536	Stau1	ENSMUST00000142481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039536	Stau1	ENSMUST00000149454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039536	Stau1	ENSMUST00000184390	ENSMUSP00000139039	TRANSLATION	nonsense_mediated_decay	-	-	1	436	0	3.995	0	81.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033068	Entpd6	ENSMUST00000139723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033068	Entpd6	ENSMUST00000094467	ENSMUSP00000092038	TRANSLATION	protein_coding	-	CCDS16861.1	1	455	8	5.09	6.3	239.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033068	Entpd6	ENSMUST00000146517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033068	Entpd6	ENSMUST00000147223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053746	Ptrh1	ENSMUST00000192262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053746	Ptrh1	ENSMUST00000066352	ENSMUSP00000068850	TRANSLATION	protein_coding	-	CCDS15931.1	1	204	8	2.94	0.5	128.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000053746	Ptrh1	ENSMUST00000138214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044083	Efcab8	ENSMUST00000144827	ENSMUSP00000135811	TRANSLATION	nonsense_mediated_decay	-	-	2	203	3	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044083	Efcab8	ENSMUST00000175856	ENSMUSP00000134797	TRANSLATION	protein_coding	start	-	2	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044083	Efcab8	ENSMUST00000230058	ENSMUSP00000155494	TRANSLATION	nonsense_mediated_decay	-	-	-	178	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044083	Efcab8	ENSMUST00000126656	ENSMUSP00000135661	TRANSLATION	protein_coding	-	-	5	1323	3	4.29	0	40.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027176	Cstf3	ENSMUST00000126539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027176	Cstf3	ENSMUST00000137961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027176	Cstf3	ENSMUST00000131761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027176	Cstf3	ENSMUST00000124944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027176	Cstf3	ENSMUST00000122900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027176	Cstf3	ENSMUST00000028599	ENSMUSP00000028599	TRANSLATION	protein_coding	-	CCDS16490.1	1	717	0	13.896	14	278.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032046	Abhd12	ENSMUST00000129228	ENSMUSP00000118501	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032046	Abhd12	ENSMUST00000056149	ENSMUSP00000053558	TRANSLATION	protein_coding	-	CCDS50742.1	1	398	8	1.7648	7.5	54.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032046	Abhd12	ENSMUST00000155119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032046	Abhd12	ENSMUST00000145826	ENSMUSP00000122331	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032046	Abhd12	ENSMUST00000138608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032046	Abhd12	ENSMUST00000141899	ENSMUSP00000122763	TRANSLATION	nonsense_mediated_decay	-	-	1	298	6	1.7648	0	54.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000032046	Abhd12	ENSMUST00000156641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061186	Sfmbt2	ENSMUST00000114861	ENSMUSP00000110511	TRANSLATION	protein_coding	-	CCDS57153.1	5	183	0	2.548	0.5	80.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000061186	Sfmbt2	ENSMUST00000114864	ENSMUSP00000110514	TRANSLATION	protein_coding	-	CCDS57153.1	1	183	0	2.548	0.5	80.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000061186	Sfmbt2	ENSMUST00000114862	ENSMUSP00000110512	TRANSLATION	protein_coding	-	CCDS57153.1	1	183	0	2.548	0.5	80.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000061186	Sfmbt2	ENSMUST00000126531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061186	Sfmbt2	ENSMUST00000145398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061186	Sfmbt2	ENSMUST00000041105	ENSMUSP00000040575	TRANSLATION	protein_coding	-	CCDS57152.1	5	975	0	11.59	0.5	439.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000061186	Sfmbt2	ENSMUST00000116594	ENSMUSP00000112293	TRANSLATION	protein_coding	-	CCDS38046.1	1	942	0	11.59	0.5	439.4	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000016349	Eef1a2	ENSMUST00000055990	ENSMUSP00000054556	TRANSLATION	protein_coding	-	CCDS17201.1	1	463	17	7	21.5	374.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027357	Crls1	ENSMUST00000154160	ENSMUSP00000129137	TRANSLATION	protein_coding	stop	-	5	191	0	0	0	46.8	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000027357	Crls1	ENSMUST00000110122	ENSMUSP00000105749	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	0	2	0,4	-	-	-1	MINOR
ENSMUSG00000027357	Crls1	ENSMUST00000028835	ENSMUSP00000028835	TRANSLATION	protein_coding	-	CCDS16779.1	1	303	0	0	3.9	46.8	9	0,4	-	-	7.094	PRINCIPAL:3
ENSMUSG00000027357	Crls1	ENSMUST00000124836	ENSMUSP00000132682	TRANSLATION	protein_coding	-	CCDS38247.1	1	188	0	0	6.3	36.9	7	-4,-6	-	-	6.728	ALTERNATIVE:1
ENSMUSG00000027357	Crls1	ENSMUST00000124834	ENSMUSP00000129509	TRANSLATION	nonsense_mediated_decay	-	-	1	154	0	0	0	0	2	0,4	-	-	-1	MINOR
ENSMUSG00000058594	Fbh1	ENSMUST00000192171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058594	Fbh1	ENSMUST00000155604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058594	Fbh1	ENSMUST00000131893	ENSMUSP00000116392	TRANSLATION	protein_coding	start/stop	-	3	297	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058594	Fbh1	ENSMUST00000151402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058594	Fbh1	ENSMUST00000139292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058594	Fbh1	ENSMUST00000071564	ENSMUSP00000071495	TRANSLATION	protein_coding	-	CCDS15688.1	1	1042	12	0	1.5	36.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000058594	Fbh1	ENSMUST00000123717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058594	Fbh1	ENSMUST00000123723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058594	Fbh1	ENSMUST00000136633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058594	Fbh1	ENSMUST00000126543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010914	Pdhx	ENSMUST00000011058	ENSMUSP00000011058	TRANSLATION	protein_coding	-	CCDS16473.1	1	501	0	9.22	1.7	342.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000010914	Pdhx	ENSMUST00000132449	ENSMUSP00000119172	TRANSLATION	protein_coding	start/stop	-	3	218	0	4.252	0	79.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010914	Pdhx	ENSMUST00000111183	ENSMUSP00000106814	TRANSLATION	protein_coding	-	-	1	220	0	3.87	0	95.6	0	-4,0	-	-	0	MINOR
ENSMUSG00000027323	Rad51	ENSMUST00000140939	ENSMUSP00000119444	TRANSLATION	protein_coding	stop	-	5	178	6	3.08	0	76	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027323	Rad51	ENSMUST00000143934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027323	Rad51	ENSMUST00000151406	ENSMUSP00000117939	TRANSLATION	protein_coding	start	-	3	237	7	5.16	0	304.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027323	Rad51	ENSMUST00000141389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027323	Rad51	ENSMUST00000152327	ENSMUSP00000119101	TRANSLATION	nonsense_mediated_decay	-	-	1	220	7	5.91	0	214.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027323	Rad51	ENSMUST00000154683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027323	Rad51	ENSMUST00000110828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027323	Rad51	ENSMUST00000028795	ENSMUSP00000028795	TRANSLATION	protein_coding	-	CCDS16590.1	1	339	7	9.24	17	430.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038932	Tcfl5	ENSMUST00000037877	ENSMUSP00000040611	TRANSLATION	protein_coding	-	CCDS17181.2	1	489	0	0	0.5	38.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038932	Tcfl5	ENSMUST00000131881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038932	Tcfl5	ENSMUST00000161425	ENSMUSP00000125945	TRANSLATION	nonsense_mediated_decay	-	-	5	292	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109449	Olfr1280	ENSMUST00000213551	ENSMUSP00000148875	TRANSLATION	nonsense_mediated_decay	-	-	5	305	0	0.3	5.1	166.1	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000109449	Olfr1280	ENSMUST00000219291	ENSMUSP00000151980	TRANSLATION	protein_coding	-	CCDS16520.1	3	305	0	0.3	5.1	166.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000109449	Olfr1280	ENSMUST00000082167	ENSMUSP00000080805	TRANSLATION	protein_coding	-	CCDS16520.1	-	305	0	0.3	5.1	166.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027215	Cd82	ENSMUST00000028644	ENSMUSP00000028644	TRANSLATION	protein_coding	-	CCDS16454.1	1	266	0	2.44	1.5	179.7	7	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027215	Cd82	ENSMUST00000124804	ENSMUSP00000115349	TRANSLATION	protein_coding	stop	-	3	21	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027215	Cd82	ENSMUST00000111257	ENSMUSP00000106888	TRANSLATION	protein_coding	-	CCDS16454.1	5	266	0	2.44	1.5	179.7	7	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027215	Cd82	ENSMUST00000116457	ENSMUSP00000112158	TRANSLATION	protein_coding	-	CCDS16454.1	1	266	0	2.44	1.5	179.7	7	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027215	Cd82	ENSMUST00000145553	ENSMUSP00000115310	TRANSLATION	protein_coding	stop	-	5	146	0	2.44	0	107.1	6	-1,-5	-	-	-1	MINOR
ENSMUSG00000027215	Cd82	ENSMUST00000099696	ENSMUSP00000097287	TRANSLATION	protein_coding	-	CCDS16454.1	1	266	0	2.44	1.5	179.7	7	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027215	Cd82	ENSMUST00000150508	ENSMUSP00000120183	TRANSLATION	protein_coding	stop	-	5	146	0	2.44	0	107.1	6	-1,-5	-	-	-1	MINOR
ENSMUSG00000027215	Cd82	ENSMUST00000144168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027215	Cd82	ENSMUST00000111256	ENSMUSP00000106887	TRANSLATION	protein_coding	stop	-	5	88	0	1.99	0	63.7	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000027215	Cd82	ENSMUST00000123565	ENSMUSP00000114762	TRANSLATION	protein_coding	stop	-	3	179	0	2.44	0	136.9	6	-1,-5	-	-	-1	MINOR
ENSMUSG00000027215	Cd82	ENSMUST00000126772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017929	B4galt5	ENSMUST00000155623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017929	B4galt5	ENSMUST00000109221	ENSMUSP00000104844	TRANSLATION	protein_coding	-	CCDS17098.1	1	388	15	5.64	1.8	282.7	0	-1,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000017929	B4galt5	ENSMUST00000149698	ENSMUSP00000118229	TRANSLATION	protein_coding	start	-	3	96	4	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017929	B4galt5	ENSMUST00000133557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038180	Spag4	ENSMUST00000149139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038180	Spag4	ENSMUST00000131144	ENSMUSP00000120079	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038180	Spag4	ENSMUST00000038860	ENSMUSP00000036484	TRANSLATION	protein_coding	-	CCDS50777.1	1	443	0	4.23	2.7	144.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038180	Spag4	ENSMUST00000137966	ENSMUSP00000118715	TRANSLATION	protein_coding	stop	-	3	210	0	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038180	Spag4	ENSMUST00000125996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038180	Spag4	ENSMUST00000136765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038180	Spag4	ENSMUST00000138178	ENSMUSP00000121781	TRANSLATION	nonsense_mediated_decay	start	-	3	78	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038180	Spag4	ENSMUST00000133511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042133	Ppig	ENSMUST00000153772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000040915	ENSMUSP00000045945	TRANSLATION	protein_coding	-	CCDS38137.1	1	752	8	5.08	3.9	162.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000042133	Ppig	ENSMUST00000090858	ENSMUSP00000088370	TRANSLATION	protein_coding	-	CCDS38137.1	1	752	8	5.08	3.9	162.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000042133	Ppig	ENSMUST00000144652	ENSMUSP00000114570	TRANSLATION	protein_coding	stop	-	5	127	6	3.75	0	104.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042133	Ppig	ENSMUST00000146234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000128506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000134500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000125105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000124810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000142839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000134424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042133	Ppig	ENSMUST00000143954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026727	Rsu1	ENSMUST00000134551	ENSMUSP00000125338	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026727	Rsu1	ENSMUST00000191959	ENSMUSP00000141763	TRANSLATION	protein_coding	-	-	3	64	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026727	Rsu1	ENSMUST00000162223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026727	Rsu1	ENSMUST00000028059	ENSMUSP00000028059	TRANSLATION	protein_coding	-	CCDS15693.1	1	277	0	5.61	21.5	68.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026727	Rsu1	ENSMUST00000137670	ENSMUSP00000117460	TRANSLATION	protein_coding	stop	-	3	112	0	2.5686	0	35.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026727	Rsu1	ENSMUST00000195538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026727	Rsu1	ENSMUST00000114791	ENSMUSP00000110439	TRANSLATION	protein_coding	-	-	5	260	0	5.11	4.1	37.4	0	-4,-5	-	-	8.89	MINOR
ENSMUSG00000026727	Rsu1	ENSMUST00000129257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026727	Rsu1	ENSMUST00000131226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026727	Rsu1	ENSMUST00000161912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040035	Disp2	ENSMUST00000110846	ENSMUSP00000106470	TRANSLATION	protein_coding	-	-	1	302	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000040035	Disp2	ENSMUST00000063975	ENSMUSP00000070031	TRANSLATION	protein_coding	-	-	1	341	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000040035	Disp2	ENSMUST00000037547	ENSMUSP00000037136	TRANSLATION	protein_coding	-	CCDS16584.1	1	1345	0	0	1.5	23.1	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040035	Disp2	ENSMUST00000142072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040035	Disp2	ENSMUST00000110843	ENSMUSP00000106467	TRANSLATION	protein_coding	-	-	1	283	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000049744	Arhgap15	ENSMUST00000055776	ENSMUSP00000056461	TRANSLATION	protein_coding	-	CCDS16019.1	1	481	5	8.98	1.5	216.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000049744	Arhgap15	ENSMUST00000128630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049744	Arhgap15	ENSMUST00000140528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049744	Arhgap15	ENSMUST00000112824	ENSMUSP00000108443	TRANSLATION	protein_coding	-	CCDS79793.1	1	477	5	8.18	0.5	179.4	0	-4,-5	-	-	13.148	MINOR
ENSMUSG00000049744	Arhgap15	ENSMUST00000112822	ENSMUSP00000108441	TRANSLATION	nonsense_mediated_decay	-	-	1	108	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035238	Kcnk15	ENSMUST00000109396	ENSMUSP00000105023	TRANSLATION	protein_coding	-	-	1	324	0	1.16	0	130	5	2,-3	-	-	11.436	ALTERNATIVE:2
ENSMUSG00000035238	Kcnk15	ENSMUST00000044798	ENSMUSP00000048326	TRANSLATION	protein_coding	-	CCDS17017.1	1	343	0	1.28	0.5	130	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000074934	Grem1	ENSMUST00000099575	ENSMUSP00000097170	TRANSLATION	protein_coding	-	CCDS16560.1	1	184	0	1	11.6	145.2	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000027233	Patl2	ENSMUST00000028665	ENSMUSP00000028665	TRANSLATION	protein_coding	-	CCDS16653.1	1	529	0	3.54	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000118623	AL935121.1	ENSMUST00000145993	ENSMUSP00000159254	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	132	0	3.05	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000118623	AL935121.1	ENSMUST00000124129	ENSMUSP00000159283	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	132	0	3.05	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000038241	Cep250	ENSMUST00000155160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038241	Cep250	ENSMUST00000156355	ENSMUSP00000122223	TRANSLATION	protein_coding	start/stop	-	3	224	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038241	Cep250	ENSMUST00000109619	ENSMUSP00000105248	TRANSLATION	protein_coding	-	CCDS50772.1	5	2435	0	0	0.5	197.9	0	-4,-6	-	-	6	PRINCIPAL:4
ENSMUSG00000038241	Cep250	ENSMUST00000149905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038241	Cep250	ENSMUST00000148191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038241	Cep250	ENSMUST00000128683	ENSMUSP00000119845	TRANSLATION	nonsense_mediated_decay	start	-	5	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038241	Cep250	ENSMUST00000094421	ENSMUSP00000091988	TRANSLATION	protein_coding	-	CCDS50771.1	5	2414	0	0	0.5	197.9	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000038241	Cep250	ENSMUST00000039994	ENSMUSP00000038255	TRANSLATION	protein_coding	-	CCDS50773.1	5	2434	0	0	0.5	197.9	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000038241	Cep250	ENSMUST00000109618	ENSMUSP00000105247	TRANSLATION	protein_coding	-	-	1	338	0	0	0	197.9	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000038241	Cep250	ENSMUST00000151569	ENSMUSP00000114426	TRANSLATION	protein_coding	stop	-	1	706	0	0	0	197.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000075012	Fjx1	ENSMUST00000099678	ENSMUSP00000097270	TRANSLATION	protein_coding	-	CCDS16467.1	-	450	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000075302	Erich2	ENSMUST00000100041	ENSMUSP00000097619	TRANSLATION	protein_coding	-	CCDS38141.1	1	463	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000075302	Erich2	ENSMUST00000136967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075302	Erich2	ENSMUST00000123137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075302	Erich2	ENSMUST00000134607	ENSMUSP00000122481	TRANSLATION	protein_coding	-	-	5	437	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000075302	Erich2	ENSMUST00000153121	ENSMUSP00000120262	TRANSLATION	protein_coding	start	-	5	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001864	Aif1l	ENSMUST00000156564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001864	Aif1l	ENSMUST00000156743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001864	Aif1l	ENSMUST00000148056	ENSMUSP00000141549	TRANSLATION	protein_coding	-	-	5	136	0	4.08	0	0	0	-4,-2	-	-	4.998	MINOR
ENSMUSG00000001864	Aif1l	ENSMUST00000138833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001864	Aif1l	ENSMUST00000151276	ENSMUSP00000141456	TRANSLATION	protein_coding	stop	-	5	37	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001864	Aif1l	ENSMUST00000140649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001864	Aif1l	ENSMUST00000128271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001864	Aif1l	ENSMUST00000001920	ENSMUSP00000001920	TRANSLATION	protein_coding	-	CCDS15904.1	1	150	4	4.58	9.5	0	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000001864	Aif1l	ENSMUST00000145137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001864	Aif1l	ENSMUST00000125457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027199	Gatm	ENSMUST00000154598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027199	Gatm	ENSMUST00000028624	ENSMUSP00000028624	TRANSLATION	protein_coding	-	CCDS16665.1	1	423	15	8.5	8.8	0	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000027199	Gatm	ENSMUST00000140808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027654	Fam83d	ENSMUST00000151801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027654	Fam83d	ENSMUST00000029183	ENSMUSP00000029183	TRANSLATION	protein_coding	-	CCDS50788.1	1	585	0	2	1.5	326.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000116563	AL731706.2	ENSMUST00000231720	ENSMUSP00000156010	TRANSLATION	protein_coding	-	-	-	59	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000015092	Edf1	ENSMUST00000153008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015092	Edf1	ENSMUST00000142288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015092	Edf1	ENSMUST00000144395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015092	Edf1	ENSMUST00000015236	ENSMUSP00000015236	TRANSLATION	protein_coding	-	CCDS15780.1	1	148	0	2.5	16.1	136.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000015092	Edf1	ENSMUST00000134689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026807	Ak8	ENSMUST00000137588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026807	Ak8	ENSMUST00000123794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026807	Ak8	ENSMUST00000074156	ENSMUSP00000073789	TRANSLATION	protein_coding	-	CCDS15846.1	1	479	15	4.35	5.1	147.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000060802	B2m	ENSMUST00000102476	ENSMUSP00000099534	TRANSLATION	protein_coding	-	CCDS16654.1	1	119	0	1.75	1.5	84.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027104	Atf2	ENSMUST00000112016	ENSMUSP00000107647	TRANSLATION	protein_coding	-	CCDS71076.1	1	389	4	3.66	0.5	48.1	0	-4,-5	-	-	16	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000156455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000141050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000154456	ENSMUSP00000118719	TRANSLATION	protein_coding	stop	-	5	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000173010	ENSMUSP00000133632	TRANSLATION	nonsense_mediated_decay	-	-	5	377	4	2.66	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000112007	ENSMUSP00000107638	TRANSLATION	protein_coding	-	CCDS16135.1	1	447	0	2	7.3	48.1	0	-4,-5	-	-	10.59	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000112017	ENSMUSP00000107648	TRANSLATION	protein_coding	-	CCDS16134.1	5	487	4	3.66	10.9	48.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027104	Atf2	ENSMUST00000124737	ENSMUSP00000114828	TRANSLATION	protein_coding	start	-	3	212	0	1	0	35.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000090802	ENSMUSP00000088311	TRANSLATION	protein_coding	-	CCDS16135.1	5	447	0	2	7.3	48.1	0	-4,-5	-	-	10.59	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000154965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000125159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000143714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000136958	ENSMUSP00000118357	TRANSLATION	protein_coding	stop	-	3	207	4	1.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000112010	ENSMUSP00000107641	TRANSLATION	protein_coding	-	CCDS16135.1	1	447	0	2	7.3	48.1	0	-4,-5	-	-	10.59	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000138098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000100009	ENSMUSP00000097588	TRANSLATION	protein_coding	-	CCDS16134.1	1	487	4	3.66	10.9	48.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027104	Atf2	ENSMUST00000128531	ENSMUSP00000118560	TRANSLATION	protein_coding	stop	-	3	228	4	1.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027104	Atf2	ENSMUST00000129555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027104	Atf2	ENSMUST00000055833	ENSMUSP00000058521	TRANSLATION	protein_coding	-	CCDS16134.1	5	487	4	3.66	10.9	48.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025782	Taf3	ENSMUST00000129720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025782	Taf3	ENSMUST00000114909	ENSMUSP00000110559	TRANSLATION	protein_coding	-	-	1	779	8	2.25	0	44.8	0	-4,-5	-	-	12.48	MINOR
ENSMUSG00000025782	Taf3	ENSMUST00000114906	ENSMUSP00000110556	TRANSLATION	protein_coding	-	-	2	51	6	1.5	0	38	0	-4,-5	-	-	9.072	MINOR
ENSMUSG00000025782	Taf3	ENSMUST00000114907	ENSMUSP00000110557	TRANSLATION	protein_coding	-	-	1	108	8	2.25	0	44.8	0	-4,-7	-	-	12.48	MINOR
ENSMUSG00000025782	Taf3	ENSMUST00000026888	ENSMUSP00000026888	TRANSLATION	protein_coding	-	CCDS15675.1	1	932	8	3.05	0.5	110.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000043535	Setx	ENSMUST00000145422	ENSMUSP00000119176	TRANSLATION	protein_coding	start/stop	-	5	381	0	4.11	0	259.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043535	Setx	ENSMUST00000154910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043535	Setx	ENSMUST00000129544	ENSMUSP00000119521	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043535	Setx	ENSMUST00000061578	ENSMUSP00000051492	TRANSLATION	protein_coding	-	CCDS38090.1	5	2646	0	7.05	0.5	399.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043535	Setx	ENSMUST00000135992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027109	Sp3	ENSMUST00000141372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027109	Sp3	ENSMUST00000066003	ENSMUSP00000065807	TRANSLATION	protein_coding	-	-	5	739	12	1.4	0	64.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027109	Sp3	ENSMUST00000129565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027109	Sp3	ENSMUST00000133615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027109	Sp3	ENSMUST00000102689	ENSMUSP00000099750	TRANSLATION	protein_coding	-	CCDS16122.1	1	783	12	1.4	0.5	64.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000074676	Foxs1	ENSMUST00000099200	ENSMUSP00000096806	TRANSLATION	protein_coding	-	CCDS16901.1	-	329	0	0.6	5.1	129.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053552	Ebf4	ENSMUST00000110287	ENSMUSP00000105916	TRANSLATION	protein_coding	-	-	5	569	4	10.6	0	623.1	0	-4,-5	-	-	16	MINOR
ENSMUSG00000053552	Ebf4	ENSMUST00000134728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053552	Ebf4	ENSMUST00000126740	ENSMUSP00000133528	TRANSLATION	nonsense_mediated_decay	-	-	2	582	4	10.6	0.5	623.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053552	Ebf4	ENSMUST00000110288	ENSMUSP00000105917	TRANSLATION	protein_coding	-	-	5	696	4	10.6	0.5	623.1	0	-1,1	-	-	16	MINOR
ENSMUSG00000053552	Ebf4	ENSMUST00000140169	ENSMUSP00000134520	TRANSLATION	nonsense_mediated_decay	-	-	2	541	4	10.6	0	623.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053552	Ebf4	ENSMUST00000110286	ENSMUSP00000105915	TRANSLATION	protein_coding	-	CCDS50709.1	1	599	4	10.6	6.3	623.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027483	Bpifa1	ENSMUST00000028985	ENSMUSP00000028985	TRANSLATION	protein_coding	-	CCDS16925.1	1	278	0	5.375	0.5	139.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027483	Bpifa1	ENSMUST00000144665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027483	Bpifa1	ENSMUST00000140006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027496	Aurka	ENSMUST00000109139	ENSMUSP00000104767	TRANSLATION	protein_coding	-	CCDS71204.1	1	395	17	5.5	1.5	237.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027496	Aurka	ENSMUST00000128004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027496	Aurka	ENSMUST00000028997	ENSMUSP00000028997	TRANSLATION	protein_coding	-	CCDS17129.1	1	417	17	5.5	0.5	237.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000027496	Aurka	ENSMUST00000109140	ENSMUSP00000104768	TRANSLATION	protein_coding	-	CCDS71204.1	1	395	17	5.5	1.5	237.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027496	Aurka	ENSMUST00000126107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017897	Eya2	ENSMUST00000128696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017897	Eya2	ENSMUST00000150669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017897	Eya2	ENSMUST00000063433	ENSMUSP00000066244	TRANSLATION	protein_coding	-	CCDS17084.1	1	532	4	8.05	1.5	29.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017897	Eya2	ENSMUST00000128280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017897	Eya2	ENSMUST00000150638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017897	Eya2	ENSMUST00000088132	ENSMUSP00000085455	TRANSLATION	protein_coding	-	CCDS17084.1	1	532	4	8.05	1.5	29.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000074837	Gm10770	ENSMUST00000099418	ENSMUSP00000097015	TRANSLATION	protein_coding	start/stop	-	5	238	27	1.3	0	83.3	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000049922	Slc35c1	ENSMUST00000136718	ENSMUSP00000137748	TRANSLATION	protein_coding	stop	-	2	158	0	0	0	36.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000049922	Slc35c1	ENSMUST00000125276	ENSMUSP00000119271	TRANSLATION	protein_coding	-	CCDS16449.1	1	350	0	0	6.3	71.8	14	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000049922	Slc35c1	ENSMUST00000067631	ENSMUSP00000063461	TRANSLATION	protein_coding	-	CCDS16448.1	1	363	0	0	5.1	71.8	14	-4,-1	-	-	7.548	PRINCIPAL:4
ENSMUSG00000089951	Zfp968-ps	ENSMUST00000172025	ENSMUSP00000127044	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	72.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089951	Zfp968-ps	ENSMUST00000108995	ENSMUSP00000104623	TRANSLATION	protein_coding	-	-	2	79	0	1.45	0	72.2	0	-4,-5	-	-	11.994	ALTERNATIVE:2
ENSMUSG00000089951	Zfp968-ps	ENSMUST00000127687	ENSMUSP00000122299	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	72.2	0	-4,-5	-	-	11.994	PRINCIPAL:3
ENSMUSG00000078129	Actl10	ENSMUST00000104928	ENSMUSP00000100532	TRANSLATION	protein_coding	-	CCDS50765.1	-	346	14	0.8	0.5	229.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037813	D630003M21Rik	ENSMUST00000046944	ENSMUSP00000040546	TRANSLATION	protein_coding	-	CCDS16986.1	1	1187	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000037813	D630003M21Rik	ENSMUST00000103121	ENSMUSP00000099410	TRANSLATION	protein_coding	-	CCDS50785.1	1	1106	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000037813	D630003M21Rik	ENSMUST00000169335	ENSMUSP00000130623	TRANSLATION	protein_coding	-	CCDS50785.1	5	1106	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000027193	Api5	ENSMUST00000152454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027193	Api5	ENSMUST00000028617	ENSMUSP00000028617	TRANSLATION	protein_coding	-	CCDS16459.1	1	504	0	12.08	8.8	657.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027193	Api5	ENSMUST00000144390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027193	Api5	ENSMUST00000150930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000216976	ENSMUSP00000148938	TRANSLATION	protein_coding	-	-	3	311	0	0.2	2.7	162.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000099792	ENSMUSP00000097380	TRANSLATION	protein_coding	-	-	-	311	0	0.2	2.7	162.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000214069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000099793	ENSMUSP00000097381	TRANSLATION	protein_coding	-	-	3	311	0	0.2	2.7	162.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000216833	ENSMUSP00000149046	TRANSLATION	protein_coding	-	-	5	311	0	0.2	2.7	162.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075099	Olfr1224-ps1	ENSMUST00000216913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027006	Dnajc10	ENSMUST00000028392	ENSMUSP00000028392	TRANSLATION	protein_coding	-	CCDS38159.1	1	793	7	19	6.3	370.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000027006	Dnajc10	ENSMUST00000125000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027006	Dnajc10	ENSMUST00000153093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027006	Dnajc10	ENSMUST00000154912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027006	Dnajc10	ENSMUST00000133536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075197	Olfr1046	ENSMUST00000213987	ENSMUSP00000148873	TRANSLATION	protein_coding	-	CCDS16245.1	5	316	0	0.24	5.1	170.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075197	Olfr1046	ENSMUST00000099902	ENSMUSP00000097486	TRANSLATION	protein_coding	-	CCDS16245.1	-	316	0	0.24	5.1	170.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074793	Hspa12b	ENSMUST00000099349	ENSMUSP00000096950	TRANSLATION	protein_coding	-	CCDS16755.1	1	685	22	0	5.1	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000074793	Hspa12b	ENSMUST00000127862	ENSMUSP00000138109	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074793	Hspa12b	ENSMUST00000100763	ENSMUSP00000098326	TRANSLATION	protein_coding	-	-	2	107	4	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078912	Gm11011	ENSMUST00000109160	ENSMUSP00000104788	TRANSLATION	protein_coding	stop	-	5	86	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036352	Ubac1	ENSMUST00000150608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036352	Ubac1	ENSMUST00000123275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036352	Ubac1	ENSMUST00000134990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036352	Ubac1	ENSMUST00000136750	ENSMUSP00000123115	TRANSLATION	protein_coding	start/stop	-	5	260	0	3.8	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036352	Ubac1	ENSMUST00000154336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036352	Ubac1	ENSMUST00000146363	ENSMUSP00000117683	TRANSLATION	protein_coding	start/stop	-	5	184	0	1.8	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036352	Ubac1	ENSMUST00000148725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036352	Ubac1	ENSMUST00000036509	ENSMUSP00000040220	TRANSLATION	protein_coding	-	CCDS15795.1	1	409	0	3.8	1.5	60.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036352	Ubac1	ENSMUST00000146898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038900	Rpl12	ENSMUST00000134912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038900	Rpl12	ENSMUST00000133842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038900	Rpl12	ENSMUST00000144644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038900	Rpl12	ENSMUST00000126610	ENSMUSP00000117461	TRANSLATION	protein_coding	-	CCDS15936.1	1	165	0	4.83	19.3	159.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038900	Rpl12	ENSMUST00000154340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038900	Rpl12	ENSMUST00000102811	ENSMUSP00000141294	TRANSLATION	nonsense_mediated_decay	-	-	2	84	0	0.5	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000038900	Rpl12	ENSMUST00000125415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070943	Olfr356	ENSMUST00000095021	ENSMUSP00000092631	TRANSLATION	protein_coding	-	CCDS15989.1	-	315	0	0.36	1.5	177.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075143	Olfr1157	ENSMUST00000099841	ENSMUSP00000097429	TRANSLATION	protein_coding	-	CCDS16317.1	2	312	0	0	7.5	159.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000043583	4930470P17Rik	ENSMUST00000062355	ENSMUSP00000050697	TRANSLATION	protein_coding	-	-	1	155	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000035236	Scai	ENSMUST00000203872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035236	Scai	ENSMUST00000142872	ENSMUSP00000118536	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035236	Scai	ENSMUST00000157038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035236	Scai	ENSMUST00000131225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035236	Scai	ENSMUST00000147433	ENSMUSP00000116359	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035236	Scai	ENSMUST00000204093	ENSMUSP00000145133	TRANSLATION	nonsense_mediated_decay	-	-	5	490	0	0	1.2	589.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035236	Scai	ENSMUST00000204500	ENSMUSP00000144844	TRANSLATION	nonsense_mediated_decay	start	-	5	88	0	0	0	83.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035236	Scai	ENSMUST00000204404	ENSMUSP00000145381	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035236	Scai	ENSMUST00000038874	ENSMUSP00000037194	TRANSLATION	protein_coding	-	CCDS38121.1	1	606	0	0	7.5	704.6	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000035236	Scai	ENSMUST00000203399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039678	Tbc1d13	ENSMUST00000131261	ENSMUSP00000120763	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039678	Tbc1d13	ENSMUST00000136183	ENSMUSP00000120228	TRANSLATION	nonsense_mediated_decay	-	-	3	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039678	Tbc1d13	ENSMUST00000044556	ENSMUSP00000048426	TRANSLATION	protein_coding	-	CCDS15871.1	1	400	0	2.33	14.8	115.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039678	Tbc1d13	ENSMUST00000134013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039678	Tbc1d13	ENSMUST00000132324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039678	Tbc1d13	ENSMUST00000125142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039678	Tbc1d13	ENSMUST00000150879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039678	Tbc1d13	ENSMUST00000129789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075121	Olfr1195	ENSMUST00000099818	ENSMUSP00000097406	TRANSLATION	protein_coding	-	CCDS16343.1	-	308	0	0.28	7.5	160	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075121	Olfr1195	ENSMUST00000213545	ENSMUSP00000149442	TRANSLATION	protein_coding	-	CCDS16343.1	5	308	0	0.28	7.5	160	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037376	Trmt6	ENSMUST00000147336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037376	Trmt6	ENSMUST00000145117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037376	Trmt6	ENSMUST00000127855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037376	Trmt6	ENSMUST00000039554	ENSMUSP00000044687	TRANSLATION	protein_coding	-	CCDS50728.1	1	497	0	10.25	5.1	238.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037376	Trmt6	ENSMUST00000136897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037376	Trmt6	ENSMUST00000152836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111174	Olfr1240	ENSMUST00000216123	ENSMUSP00000150256	TRANSLATION	protein_coding	-	CCDS16380.1	5	314	0	0.2	2.7	152.8	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000111174	Olfr1240	ENSMUST00000215362	ENSMUSP00000149973	TRANSLATION	protein_coding	-	CCDS16380.1	-	314	0	0.2	2.7	152.8	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075169	Olfr1098	ENSMUST00000111574	ENSMUSP00000107200	TRANSLATION	protein_coding	-	CCDS38174.1	3	315	0	0.32	1.5	175	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075169	Olfr1098	ENSMUST00000099872	ENSMUSP00000097457	TRANSLATION	protein_coding	-	CCDS38174.1	-	315	0	0.32	1.5	175	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027566	Psma7	ENSMUST00000126021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027566	Psma7	ENSMUST00000129529	ENSMUSP00000156190	TRANSLATION	protein_coding	-	-	5	223	0	5.75	0	268.6	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000027566	Psma7	ENSMUST00000029082	ENSMUSP00000029082	TRANSLATION	protein_coding	-	CCDS17166.1	1	248	0	6.75	7.6	268.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027566	Psma7	ENSMUST00000155898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027566	Psma7	ENSMUST00000142042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027566	Psma7	ENSMUST00000132431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027566	Psma7	ENSMUST00000135650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038987	Cfap157	ENSMUST00000150918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038987	Cfap157	ENSMUST00000102813	ENSMUSP00000099877	TRANSLATION	protein_coding	-	CCDS15932.1	1	523	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074899	Sptbn5	ENSMUST00000156159	ENSMUSP00000158705	TRANSLATION	protein_coding	-	-	5	3624	0	20.84	0	1029.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070544	Top1	ENSMUST00000129289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070544	Top1	ENSMUST00000109468	ENSMUSP00000105094	TRANSLATION	protein_coding	-	CCDS16995.1	1	767	5	13.75	8.8	794.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000070544	Top1	ENSMUST00000164694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070544	Top1	ENSMUST00000164510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070544	Top1	ENSMUST00000133262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070544	Top1	ENSMUST00000150039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079497	Gm13420	ENSMUST00000129574	ENSMUSP00000147234	TRANSLATION	protein_coding	-	-	5	248	0	0	1.5	70.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039157	Fam102a	ENSMUST00000136816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039157	Fam102a	ENSMUST00000147723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039157	Fam102a	ENSMUST00000048375	ENSMUSP00000044731	TRANSLATION	protein_coding	-	CCDS15917.1	1	392	0	0	1.5	101.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039157	Fam102a	ENSMUST00000133366	ENSMUSP00000118624	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	49.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039157	Fam102a	ENSMUST00000133512	ENSMUSP00000116809	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075085	Olfr1242	ENSMUST00000143935	ENSMUSP00000150972	TRANSLATION	protein_coding	-	CCDS16382.1	5	306	0	0.2	2.7	147.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075085	Olfr1242	ENSMUST00000216001	ENSMUSP00000149368	TRANSLATION	protein_coding	-	CCDS16382.1	5	306	0	0.2	2.7	147.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075085	Olfr1242	ENSMUST00000099777	ENSMUSP00000097365	TRANSLATION	protein_coding	-	CCDS16382.1	-	306	0	0.2	2.7	147.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075085	Olfr1242	ENSMUST00000111540	ENSMUSP00000107165	TRANSLATION	protein_coding	-	CCDS16382.1	3	306	0	0.2	2.7	147.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000113163	Olfr335-ps	ENSMUST00000223545	ENSMUSP00000152087	TRANSLATION	polymorphic_pseudogene	start	-	-	312	0	0.2	2.2	171.9	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000075110	Olfr1214	ENSMUST00000099804	ENSMUSP00000097392	TRANSLATION	protein_coding	-	CCDS16359.1	-	311	0	0.16	2.7	152.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075110	Olfr1214	ENSMUST00000217469	ENSMUSP00000150322	TRANSLATION	protein_coding	-	CCDS16359.1	5	311	0	0.16	2.7	152.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075110	Olfr1214	ENSMUST00000216026	ENSMUSP00000149049	TRANSLATION	protein_coding	-	CCDS16359.1	5	311	0	0.16	2.7	152.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027254	Map1a	ENSMUST00000133283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027254	Map1a	ENSMUST00000094639	ENSMUSP00000092223	TRANSLATION	protein_coding	-	CCDS38215.1	5	3014	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000027254	Map1a	ENSMUST00000131901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027254	Map1a	ENSMUST00000110639	ENSMUSP00000106269	TRANSLATION	protein_coding	-	CCDS50685.1	5	2776	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000057182	Scn3a	ENSMUST00000238417	ENSMUSP00000158693	TRANSLATION	protein_coding	start/stop	-	-	428	0	3	0	326.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000057182	Scn3a	ENSMUST00000155838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057182	Scn3a	ENSMUST00000126837	ENSMUSP00000115321	TRANSLATION	protein_coding	start/stop	-	5	122	0	3.132	0	144.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000057182	Scn3a	ENSMUST00000238409	ENSMUSP00000158784	TRANSLATION	nonsense_mediated_decay	start	-	-	137	0	0.4	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057182	Scn3a	ENSMUST00000238483	ENSMUSP00000158593	TRANSLATION	protein_coding	stop	-	-	880	0	10.655	0	645.7	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000057182	Scn3a	ENSMUST00000100069	ENSMUSP00000097647	TRANSLATION	protein_coding	-	CCDS50596.1	5	1947	4	19.08	0.5	1212.6	10	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000057182	Scn3a	ENSMUST00000238512	ENSMUSP00000158639	TRANSLATION	nonsense_mediated_decay	start	-	-	328	0	3.4	0	249.8	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000057182	Scn3a	ENSMUST00000066432	ENSMUSP00000065023	TRANSLATION	protein_coding	-	-	5	1947	4	17.48	0.5	1212.6	10	-4,-6	-	-	12.802	MINOR
ENSMUSG00000027187	Cat	ENSMUST00000028610	ENSMUSP00000028610	TRANSLATION	protein_coding	-	CCDS16478.1	1	527	45	12.33	7.1	67.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027187	Cat	ENSMUST00000111168	ENSMUSP00000106798	TRANSLATION	protein_coding	-	-	3	176	7	4.5	0	52.2	0	-4,-5	-	-	4.626	MINOR
ENSMUSG00000027316	Gfra4	ENSMUST00000110239	ENSMUSP00000105868	TRANSLATION	protein_coding	-	CCDS59637.1	1	269	0	3.01	0.5	126.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027316	Gfra4	ENSMUST00000156509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027316	Gfra4	ENSMUST00000136569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027316	Gfra4	ENSMUST00000066958	ENSMUSP00000068357	TRANSLATION	protein_coding	-	CCDS59638.1	1	260	0	3.01	0.5	126.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027316	Gfra4	ENSMUST00000028787	ENSMUSP00000028787	TRANSLATION	protein_coding	-	CCDS16752.1	1	302	0	3.01	0.5	126.9	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000027316	Gfra4	ENSMUST00000110234	ENSMUSP00000105863	TRANSLATION	protein_coding	-	-	1	199	0	0.56	0	45.1	0	-4,-7	-	-	2.19	MINOR
ENSMUSG00000027316	Gfra4	ENSMUST00000110240	ENSMUSP00000105869	TRANSLATION	protein_coding	-	CCDS50715.1	1	293	0	3.01	0.5	126.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027316	Gfra4	ENSMUST00000110235	ENSMUSP00000105864	TRANSLATION	protein_coding	-	-	1	190	0	0.56	0	45.1	0	3,-2	-	-	2.19	MINOR
ENSMUSG00000074647	Fam83c	ENSMUST00000029143	ENSMUSP00000029143	TRANSLATION	protein_coding	-	-	1	730	0	2	0	347.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000074647	Fam83c	ENSMUST00000239423	ENSMUSP00000159338	TRANSLATION	protein_coding	-	CCDS50770.1	-	776	0	2	1.5	347.6	0	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000050808	Muc15	ENSMUST00000090332	ENSMUSP00000087805	TRANSLATION	protein_coding	-	CCDS16513.1	5	331	0	0	0.5	504.4	2	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000050808	Muc15	ENSMUST00000111016	ENSMUSP00000106645	TRANSLATION	protein_coding	-	CCDS16513.1	1	331	0	0	0.5	504.4	2	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000050808	Muc15	ENSMUST00000111017	ENSMUSP00000106646	TRANSLATION	protein_coding	-	CCDS71111.1	1	284	0	0	0.5	383.6	2	1,-4	-	-	0	MINOR
ENSMUSG00000050373	Snx21	ENSMUST00000174070	ENSMUSP00000133344	TRANSLATION	protein_coding	-	-	5	148	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000050373	Snx21	ENSMUST00000174342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050373	Snx21	ENSMUST00000152471	ENSMUSP00000133914	TRANSLATION	protein_coding	-	-	1	151	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000050373	Snx21	ENSMUST00000056181	ENSMUSP00000054137	TRANSLATION	protein_coding	-	CCDS38328.1	1	363	0	1.75	3.9	54.6	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000050373	Snx21	ENSMUST00000172577	ENSMUSP00000134133	TRANSLATION	protein_coding	-	-	2	142	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000050373	Snx21	ENSMUST00000173945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050373	Snx21	ENSMUST00000140519	ENSMUSP00000134256	TRANSLATION	protein_coding	start	-	3	48	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026977	Marchf7	ENSMUST00000143806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026977	Marchf7	ENSMUST00000134905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026977	Marchf7	ENSMUST00000142485	ENSMUSP00000116925	TRANSLATION	protein_coding	start	-	2	161	8	1	0	59.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026977	Marchf7	ENSMUST00000067542	ENSMUSP00000068961	TRANSLATION	protein_coding	-	CCDS16057.1	1	693	8	1	1.5	59.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026977	Marchf7	ENSMUST00000102748	ENSMUSP00000099809	TRANSLATION	protein_coding	-	CCDS16057.1	1	693	8	1	1.5	59.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026977	Marchf7	ENSMUST00000131813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026977	Marchf7	ENSMUST00000136367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026977	Marchf7	ENSMUST00000126986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026977	Marchf7	ENSMUST00000102747	ENSMUSP00000099808	TRANSLATION	protein_coding	-	CCDS16057.1	1	693	8	1	1.5	59.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000075107	Olfr1216	ENSMUST00000218738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075107	Olfr1216	ENSMUST00000099800	ENSMUSP00000097388	TRANSLATION	protein_coding	-	CCDS16361.1	-	311	0	0.28	2.7	157.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075107	Olfr1216	ENSMUST00000217000	ENSMUSP00000149441	TRANSLATION	protein_coding	-	CCDS16361.1	5	311	0	0.28	2.7	157.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075107	Olfr1216	ENSMUST00000216000	ENSMUSP00000150674	TRANSLATION	protein_coding	-	CCDS16361.1	5	311	0	0.28	2.7	157.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040321	Zfp770	ENSMUST00000123562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040321	Zfp770	ENSMUST00000050668	ENSMUSP00000052194	TRANSLATION	protein_coding	-	CCDS16566.1	1	705	31	0	0.5	156.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000081948	Olfr1191-ps1	ENSMUST00000217379	ENSMUSP00000150078	TRANSLATION	protein_coding	-	-	5	311	0	0.36	7	170.1	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000081948	Olfr1191-ps1	ENSMUST00000120598	ENSMUSP00000150282	TRANSLATION	protein_coding	-	-	5	311	0	0.36	7	170.1	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059842	Zfp341	ENSMUST00000081926	ENSMUSP00000080596	TRANSLATION	protein_coding	-	CCDS16937.1	1	846	39	5.12	1.5	158.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000059842	Zfp341	ENSMUST00000109702	ENSMUSP00000105324	TRANSLATION	protein_coding	-	-	5	839	39	5.12	0	158.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059842	Zfp341	ENSMUST00000126421	ENSMUSP00000117383	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026836	Acvr1	ENSMUST00000090935	ENSMUSP00000088453	TRANSLATION	protein_coding	-	CCDS16050.1	1	509	19	6.4	7.5	224.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026836	Acvr1	ENSMUST00000112601	ENSMUSP00000108220	TRANSLATION	protein_coding	-	CCDS16050.1	1	509	19	6.4	7.5	224.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026836	Acvr1	ENSMUST00000126407	ENSMUSP00000120755	TRANSLATION	protein_coding	stop	-	2	130	0	0	0	40.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026836	Acvr1	ENSMUST00000145495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026836	Acvr1	ENSMUST00000056376	ENSMUSP00000056784	TRANSLATION	protein_coding	-	CCDS16050.1	1	509	19	6.4	7.5	224.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026836	Acvr1	ENSMUST00000112599	ENSMUSP00000108218	TRANSLATION	protein_coding	-	CCDS16050.1	1	509	19	6.4	7.5	224.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026826	Nr4a2	ENSMUST00000140165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026826	Nr4a2	ENSMUST00000183542	ENSMUSP00000138824	TRANSLATION	nonsense_mediated_decay	-	-	1	392	8	3.2	0	141.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026826	Nr4a2	ENSMUST00000128776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026826	Nr4a2	ENSMUST00000112629	ENSMUSP00000108248	TRANSLATION	protein_coding	-	CCDS16043.1	5	598	8	5.95	10.8	213.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026826	Nr4a2	ENSMUST00000112627	ENSMUSP00000108246	TRANSLATION	protein_coding	-	-	5	535	8	5.95	6.1	213.6	0	-4,-5	-	-	19.56	MINOR
ENSMUSG00000026826	Nr4a2	ENSMUST00000028166	ENSMUSP00000028166	TRANSLATION	protein_coding	-	CCDS16043.1	1	598	8	5.95	10.8	213.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026657	Frmd4a	ENSMUST00000123919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000175944	ENSMUSP00000135686	TRANSLATION	protein_coding	stop	-	5	525	0	6.626	0	413.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000138735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026657	Frmd4a	ENSMUST00000176864	ENSMUSP00000135057	TRANSLATION	nonsense_mediated_decay	start	-	5	159	0	0	0	148.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000132710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026657	Frmd4a	ENSMUST00000176962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000142452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000153160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000177457	ENSMUSP00000134788	TRANSLATION	protein_coding	-	CCDS84466.1	5	1035	0	6.626	0.5	413.9	0	-4,-6	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000026657	Frmd4a	ENSMUST00000115039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000176828	ENSMUSP00000134803	TRANSLATION	protein_coding	-	CCDS57151.1	1	737	0	0.132	0.5	199.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000075767	ENSMUSP00000075172	TRANSLATION	protein_coding	-	CCDS50488.1	1	1020	0	6.626	0.5	413.9	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000026657	Frmd4a	ENSMUST00000175669	ENSMUSP00000135306	TRANSLATION	protein_coding	stop	-	5	387	0	6.826	0	214.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000176803	ENSMUSP00000135432	TRANSLATION	nonsense_mediated_decay	start	-	5	115	0	2.64	0	56	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000141746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000147156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000239018	ENSMUSP00000159003	TRANSLATION	protein_coding	stop	-	-	44	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000137809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026657	Frmd4a	ENSMUST00000115037	ENSMUSP00000110689	TRANSLATION	protein_coding	stop	-	5	142	0	3.404	0	83.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026657	Frmd4a	ENSMUST00000091497	ENSMUSP00000089079	TRANSLATION	protein_coding	-	CCDS15656.2	1	1042	0	6.626	0.5	413.9	0	-4,-2	-	-	11.598	PRINCIPAL:3
ENSMUSG00000037262	Kin	ENSMUST00000142773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037262	Kin	ENSMUST00000142599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037262	Kin	ENSMUST00000042512	ENSMUSP00000043614	TRANSLATION	protein_coding	-	CCDS15676.1	1	391	4	3.5	5.5	169.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075190	Olfr1054	ENSMUST00000099895	ENSMUSP00000097480	TRANSLATION	protein_coding	-	CCDS16251.1	-	312	0	0.2	7.5	166.4	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075190	Olfr1054	ENSMUST00000213205	ENSMUSP00000150810	TRANSLATION	protein_coding	-	CCDS16251.1	5	312	0	0.2	7.5	166.4	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027285	Haus2	ENSMUST00000124187	ENSMUSP00000117299	TRANSLATION	protein_coding	-	CCDS16624.1	1	234	0	0	7.5	239.6	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000027285	Haus2	ENSMUST00000110706	ENSMUSP00000106334	TRANSLATION	protein_coding	-	CCDS71120.1	1	202	0	0	1.7	211.9	0	-4,-5	-	-	4.662	MINOR
ENSMUSG00000027285	Haus2	ENSMUST00000028741	ENSMUSP00000028741	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	45	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000148786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036890	Gtdc1	ENSMUST00000154744	ENSMUSP00000119239	TRANSLATION	protein_coding	stop	-	2	115	0	0	0	158	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000148279	ENSMUSP00000120593	TRANSLATION	protein_coding	stop	-	5	191	0	0	0	241.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000146694	ENSMUSP00000119639	TRANSLATION	protein_coding	stop	-	3	142	0	0	0	158	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000133442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036890	Gtdc1	ENSMUST00000112810	ENSMUSP00000108429	TRANSLATION	protein_coding	-	CCDS71050.1	1	445	0	0	0.5	276.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000036890	Gtdc1	ENSMUST00000130991	ENSMUSP00000116839	TRANSLATION	protein_coding	stop	-	5	238	0	0	0	67	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000129240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036890	Gtdc1	ENSMUST00000134813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036890	Gtdc1	ENSMUST00000049051	ENSMUSP00000038119	TRANSLATION	protein_coding	start	-	1	386	0	0	0	193.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000143333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036890	Gtdc1	ENSMUST00000100127	ENSMUSP00000097703	TRANSLATION	protein_coding	-	-	1	106	0	0	0	67.1	0	-4,-7	-	-	0	MINOR
ENSMUSG00000036890	Gtdc1	ENSMUST00000143766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000124172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000114261	ENSMUSP00000109899	TRANSLATION	protein_coding	-	CCDS15775.1	1	205	0	5.35	1.5	297.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047617	Paxx	ENSMUST00000132561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000125710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000130130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000141613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000132596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000133919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000138079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000123986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000128560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047617	Paxx	ENSMUST00000151239	ENSMUSP00000120533	TRANSLATION	protein_coding	stop	-	3	157	0	3.75	0	185.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000047617	Paxx	ENSMUST00000135915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050776	Olfr1317	ENSMUST00000060098	ENSMUSP00000058587	TRANSLATION	protein_coding	-	CCDS16546.1	-	316	0	0.36	1.5	136.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050776	Olfr1317	ENSMUST00000216988	ENSMUSP00000149091	TRANSLATION	protein_coding	-	CCDS16546.1	5	316	0	0.36	1.5	136.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050776	Olfr1317	ENSMUST00000213693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050776	Olfr1317	ENSMUST00000214801	ENSMUSP00000150073	TRANSLATION	protein_coding	-	CCDS16546.1	5	316	0	0.36	1.5	136.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001999	Blvra	ENSMUST00000110389	ENSMUSP00000106019	TRANSLATION	protein_coding	-	-	3	140	17	3.24	0	71.4	0	-4,-7	-	-	3.144	MINOR
ENSMUSG00000001999	Blvra	ENSMUST00000142861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001999	Blvra	ENSMUST00000142737	ENSMUSP00000116825	TRANSLATION	protein_coding	stop	-	3	152	20	4	0	75.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001999	Blvra	ENSMUST00000135529	ENSMUSP00000118278	TRANSLATION	protein_coding	stop	-	3	151	17	3	0	71.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001999	Blvra	ENSMUST00000002064	ENSMUSP00000002064	TRANSLATION	protein_coding	-	CCDS16692.1	1	295	22	6	6.5	248.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000027367	Stard7	ENSMUST00000110374	ENSMUSP00000106003	TRANSLATION	protein_coding	-	-	1	122	0	0.5	0	0	0	-4,-5	-	-	1.224	MINOR
ENSMUSG00000027367	Stard7	ENSMUST00000125049	ENSMUSP00000116374	TRANSLATION	protein_coding	start	-	2	409	0	2.455	0	59.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000027367	Stard7	ENSMUST00000144687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027367	Stard7	ENSMUST00000135616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027367	Stard7	ENSMUST00000131196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027367	Stard7	ENSMUST00000154549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027367	Stard7	ENSMUST00000110375	ENSMUSP00000106004	TRANSLATION	protein_coding	-	CCDS16698.2	1	373	0	2.455	3.9	65.1	0	-1,2	-	-	13	PRINCIPAL:1
ENSMUSG00000027367	Stard7	ENSMUST00000123152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109487	Olfr1298	ENSMUST00000208284	ENSMUSP00000146343	TRANSLATION	protein_coding	-	CCDS16531.1	5	312	0	0.3	2.7	161.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109487	Olfr1298	ENSMUST00000119566	ENSMUSP00000147197	TRANSLATION	protein_coding	-	CCDS16531.1	-	312	0	0.3	2.7	161.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039621	Prex1	ENSMUST00000109246	ENSMUSP00000104869	TRANSLATION	protein_coding	-	-	1	462	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039621	Prex1	ENSMUST00000127553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039621	Prex1	ENSMUST00000136564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039621	Prex1	ENSMUST00000140624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039621	Prex1	ENSMUST00000099080	ENSMUSP00000096679	TRANSLATION	protein_coding	-	-	1	1480	0	11.09	0	202.6	0	-4,-5	-	-	0.228	MINOR
ENSMUSG00000039621	Prex1	ENSMUST00000036719	ENSMUSP00000037180	TRANSLATION	protein_coding	-	CCDS38334.1	1	1650	0	14.84	0.5	298.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039621	Prex1	ENSMUST00000152238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039621	Prex1	ENSMUST00000136974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079037	Prnp	ENSMUST00000142070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079037	Prnp	ENSMUST00000091288	ENSMUSP00000088833	TRANSLATION	protein_coding	-	CCDS16766.1	1	254	0	1	3.9	176.9	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000059013	Sh2d3c	ENSMUST00000113242	ENSMUSP00000108868	TRANSLATION	protein_coding	-	CCDS57168.1	1	702	0	6.8	6.3	96.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000059013	Sh2d3c	ENSMUST00000139563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059013	Sh2d3c	ENSMUST00000141670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059013	Sh2d3c	ENSMUST00000124133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059013	Sh2d3c	ENSMUST00000131101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059013	Sh2d3c	ENSMUST00000074248	ENSMUSP00000073866	TRANSLATION	protein_coding	-	CCDS15928.1	1	854	0	6.8	1.5	96.1	0	-4,-2	-	-	12.158	MINOR
ENSMUSG00000026765	Lypd6b	ENSMUST00000028103	ENSMUSP00000028103	TRANSLATION	protein_coding	-	CCDS16025.1	1	191	0	0	0.5	182.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026765	Lypd6b	ENSMUST00000129867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026765	Lypd6b	ENSMUST00000153422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093752	Gm20716	ENSMUST00000138667	ENSMUSP00000139070	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	260	15	3.234	3.9	133.6	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000048647	Exd1	ENSMUST00000171024	ENSMUSP00000126713	TRANSLATION	protein_coding	-	CCDS16603.1	1	570	0	2.88	0.5	34.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048647	Exd1	ENSMUST00000133668	ENSMUSP00000116082	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048647	Exd1	ENSMUST00000060009	ENSMUSP00000054980	TRANSLATION	protein_coding	-	CCDS16603.1	1	570	0	2.88	0.5	34.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075158	Olfr1111	ENSMUST00000216378	ENSMUSP00000150760	TRANSLATION	protein_coding	-	CCDS16283.1	5	312	0	0.16	5.2	183.2	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075158	Olfr1111	ENSMUST00000214492	ENSMUSP00000149747	TRANSLATION	protein_coding	-	CCDS16283.1	5	312	0	0.16	5.2	183.2	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075158	Olfr1111	ENSMUST00000099860	ENSMUSP00000097446	TRANSLATION	protein_coding	-	CCDS16283.1	-	312	0	0.16	5.2	183.2	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027070	Lrp2	ENSMUST00000092551	ENSMUSP00000090212	TRANSLATION	protein_coding	-	-	1	426	38	7.56	0	270.9	0	4,-1	-	-	0	MINOR
ENSMUSG00000027070	Lrp2	ENSMUST00000100051	ENSMUSP00000097628	TRANSLATION	protein_coding	-	-	1	1363	67	18.92	0	683.4	0	4,-1	-	-	0	MINOR
ENSMUSG00000027070	Lrp2	ENSMUST00000128742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027070	Lrp2	ENSMUST00000080953	ENSMUSP00000079752	TRANSLATION	protein_coding	-	CCDS38135.1	5	4660	167	37.54	1.5	2061.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056544	Defb21	ENSMUST00000070722	ENSMUSP00000065102	TRANSLATION	protein_coding	-	CCDS16890.1	1	100	0	0	0.5	29.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000040154	Wfdc5	ENSMUST00000131974	ENSMUSP00000115448	TRANSLATION	protein_coding	start	-	1	59	0	0	0	31.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040154	Wfdc5	ENSMUST00000045127	ENSMUSP00000035824	TRANSLATION	protein_coding	-	CCDS17023.1	1	126	0	0.8	5.2	66.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000027222	Pex16	ENSMUST00000155891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027222	Pex16	ENSMUST00000028650	ENSMUSP00000028650	TRANSLATION	protein_coding	-	CCDS16444.1	1	336	0	0	6.3	297.4	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000027222	Pex16	ENSMUST00000154669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027222	Pex16	ENSMUST00000148386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027603	Ggt7	ENSMUST00000029131	ENSMUSP00000029131	TRANSLATION	protein_coding	-	CCDS16949.1	1	662	3	9.5	7.5	470.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027603	Ggt7	ENSMUST00000138033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027603	Ggt7	ENSMUST00000147601	ENSMUSP00000120560	TRANSLATION	protein_coding	stop	-	5	202	0	1.4	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027603	Ggt7	ENSMUST00000176117	ENSMUSP00000135314	TRANSLATION	protein_coding	stop	-	5	270	0	4.51	0	209.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027603	Ggt7	ENSMUST00000148296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051769	Wfdc15a	ENSMUST00000063251	ENSMUSP00000070718	TRANSLATION	protein_coding	-	CCDS38319.1	1	80	0	0	1.5	38.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000074923	Pak6	ENSMUST00000152550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074923	Pak6	ENSMUST00000132843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074923	Pak6	ENSMUST00000099557	ENSMUSP00000097153	TRANSLATION	protein_coding	-	CCDS16580.1	1	682	19	6	7.5	284.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000074923	Pak6	ENSMUST00000132577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074923	Pak6	ENSMUST00000110853	ENSMUSP00000106477	TRANSLATION	protein_coding	-	CCDS16580.1	1	682	19	6	7.5	284.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000078202	Nrarp	ENSMUST00000104999	ENSMUSP00000100615	TRANSLATION	protein_coding	-	CCDS38066.1	-	114	0	0.64	13.3	61.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037307	Banf2	ENSMUST00000110032	ENSMUSP00000105659	TRANSLATION	protein_coding	-	CCDS16813.1	1	90	0	1.8	7.5	122	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037307	Banf2	ENSMUST00000037722	ENSMUSP00000046219	TRANSLATION	protein_coding	-	CCDS16813.1	1	90	0	1.8	7.5	122	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033852	Gm28042	ENSMUST00000129685	ENSMUSP00000115498	TRANSLATION	protein_coding,RT	-	-	5	1014	6	19.52	0	339.4	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000033852	Gm28042	ENSMUST00000125805	ENSMUSP00000122869	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	80	0	1.75	0	87	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000033852	Gm28042	ENSMUST00000162393	ENSMUSP00000125329	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	243	0	4.25	0	171.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000033852	Gm28042	ENSMUST00000156805	ENSMUSP00000117535	TRANSLATION	protein_coding,RT	-	-	5	892	6	17.52	1.2	339.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000027238	Frmd5	ENSMUST00000131092	ENSMUSP00000118272	TRANSLATION	protein_coding	start	-	3	206	0	0.36	0	49.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000153704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027238	Frmd5	ENSMUST00000138157	ENSMUSP00000115136	TRANSLATION	protein_coding	-	CCDS16649.1	1	517	0	7.16	6.3	238	0	-4,-2	-	-	13.623	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000110592	ENSMUSP00000106222	TRANSLATION	protein_coding	-	-	5	570	0	7.16	10.8	238	3	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027238	Frmd5	ENSMUST00000133898	ENSMUSP00000118269	TRANSLATION	protein_coding	start	-	5	440	0	5.16	0	178.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000128428	ENSMUSP00000116468	TRANSLATION	nonsense_mediated_decay	-	-	1	216	0	4.85	0	111.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000110593	ENSMUSP00000106223	TRANSLATION	protein_coding	start	-	1	509	0	7.01	0	216	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000155570	ENSMUSP00000120176	TRANSLATION	protein_coding	start	-	1	500	0	7.01	0	216	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000145075	ENSMUSP00000122195	TRANSLATION	nonsense_mediated_decay	-	-	3	120	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000142016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027238	Frmd5	ENSMUST00000153932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027238	Frmd5	ENSMUST00000212518	ENSMUSP00000148465	TRANSLATION	protein_coding	-	-	5	256	0	0	0	0	3	-4,0	-	-	0	MINOR
ENSMUSG00000027238	Frmd5	ENSMUST00000121219	ENSMUSP00000113568	TRANSLATION	protein_coding	-	-	1	481	0	5.16	3.7	178.4	3	-4,-6	-	-	5.25	MINOR
ENSMUSG00000013465	Nelfb	ENSMUST00000059849	ENSMUSP00000057731	TRANSLATION	protein_coding	-	-	1	631	0	0	2.7	811.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000013465	Nelfb	ENSMUST00000146729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013465	Nelfb	ENSMUST00000124900	ENSMUSP00000115296	TRANSLATION	protein_coding	start/stop	-	5	144	0	0	0	150.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013465	Nelfb	ENSMUST00000128876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013465	Nelfb	ENSMUST00000129140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013465	Nelfb	ENSMUST00000147890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013465	Nelfb	ENSMUST00000140934	ENSMUSP00000115698	TRANSLATION	protein_coding	start/stop	-	3	204	0	0	0	341.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013465	Nelfb	ENSMUST00000138199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075102	Olfr1221	ENSMUST00000213404	ENSMUSP00000149122	TRANSLATION	protein_coding	-	CCDS16366.1	5	311	0	0.2	2.7	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075102	Olfr1221	ENSMUST00000217635	ENSMUSP00000149330	TRANSLATION	protein_coding	-	CCDS16366.1	5	311	0	0.2	2.7	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075102	Olfr1221	ENSMUST00000099795	ENSMUSP00000097383	TRANSLATION	protein_coding	-	CCDS16366.1	-	311	0	0.2	2.7	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075102	Olfr1221	ENSMUST00000143255	ENSMUSP00000150194	TRANSLATION	protein_coding	-	CCDS16366.1	3	311	0	0.2	2.7	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027300	Ubox5	ENSMUST00000140581	ENSMUSP00000114878	TRANSLATION	nonsense_mediated_decay	-	-	1	553	0	0	0	96.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027300	Ubox5	ENSMUST00000028761	ENSMUSP00000028761	TRANSLATION	protein_coding	-	CCDS16747.1	1	539	8	0	3.9	120.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026818	Cel	ENSMUST00000028161	ENSMUSP00000028161	TRANSLATION	protein_coding	-	CCDS15841.1	1	599	12	10.1	0.5	527	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026818	Cel	ENSMUST00000124756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038259	Gdf5	ENSMUST00000040162	ENSMUSP00000048079	TRANSLATION	protein_coding	-	CCDS16958.1	1	495	0	1	0.5	161.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000000359	Rem1	ENSMUST00000000369	ENSMUSP00000000369	TRANSLATION	protein_coding	-	CCDS16895.1	1	297	15	3.75	7.5	107.2	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000000359	Rem1	ENSMUST00000150913	ENSMUSP00000119532	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000359	Rem1	ENSMUST00000139370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027574	Nkain4	ENSMUST00000151494	ENSMUSP00000114891	TRANSLATION	protein_coding	start	-	3	40	0	0	0	40.9	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000027574	Nkain4	ENSMUST00000103053	ENSMUSP00000099342	TRANSLATION	protein_coding	-	CCDS17189.1	1	208	0	0	7.1	313.8	8	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000027574	Nkain4	ENSMUST00000139929	ENSMUSP00000116965	TRANSLATION	protein_coding	start/stop	-	3	144	0	0	0	171.8	4	2,-2	-	-	-1	MINOR
ENSMUSG00000027574	Nkain4	ENSMUST00000137274	ENSMUSP00000118349	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	143.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000027574	Nkain4	ENSMUST00000108873	ENSMUSP00000104501	TRANSLATION	protein_coding	-	CCDS50841.1	1	181	0	0	2.9	274.5	8	4,-1	-	-	4.575	MINOR
ENSMUSG00000027574	Nkain4	ENSMUST00000134231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027574	Nkain4	ENSMUST00000148905	ENSMUSP00000119925	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	181.4	3	4,-1	-	-	-1	MINOR
ENSMUSG00000036040	Adamtsl2	ENSMUST00000139633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036040	Adamtsl2	ENSMUST00000169787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036040	Adamtsl2	ENSMUST00000091233	ENSMUSP00000088774	TRANSLATION	protein_coding	-	CCDS15824.1	1	957	3	5.28	3.9	238.7	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000036040	Adamtsl2	ENSMUST00000143246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036040	Adamtsl2	ENSMUST00000130600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025314	Ptprj	ENSMUST00000111493	ENSMUSP00000107119	TRANSLATION	protein_coding	-	-	5	1164	13	8.8	0.5	334	1	-4,-5	-	-	16.236	MINOR
ENSMUSG00000025314	Ptprj	ENSMUST00000168621	ENSMUSP00000129592	TRANSLATION	protein_coding	-	CCDS50630.1	1	1350	13	8.8	0.5	363.4	1	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000025314	Ptprj	ENSMUST00000111495	ENSMUSP00000107121	TRANSLATION	protein_coding	-	CCDS50629.1	1	1299	13	8.3	0.5	363.4	1	-4,-7	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000025314	Ptprj	ENSMUST00000129323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060827	Olfr1193	ENSMUST00000213893	ENSMUSP00000150185	TRANSLATION	protein_coding	-	-	5	311	0	0.42	7	169.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000060827	Olfr1193	ENSMUST00000216767	ENSMUSP00000148918	TRANSLATION	protein_coding	-	-	5	311	0	0.42	7	169.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000060827	Olfr1193	ENSMUST00000217271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060827	Olfr1193	ENSMUST00000081697	ENSMUSP00000080399	TRANSLATION	protein_coding	-	CCDS16342.1	-	318	0	0.42	0.5	169.8	6	-4,-7	-	-	12	MINOR
ENSMUSG00000056501	Cebpb	ENSMUST00000070642	ENSMUSP00000069850	TRANSLATION	protein_coding	-	CCDS17105.1	-	296	0	0.6	0.5	64	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074945	Olfr1314	ENSMUST00000099598	ENSMUSP00000097193	TRANSLATION	protein_coding	-	CCDS16544.1	-	312	0	0.3	6.3	139.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000074945	Olfr1314	ENSMUST00000207976	ENSMUSP00000146418	TRANSLATION	protein_coding	-	CCDS16544.1	5	312	0	0.3	6.3	139.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027210	Meis2	ENSMUST00000133990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000149217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000134314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000138526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027210	Meis2	ENSMUST00000154671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000118654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027210	Meis2	ENSMUST00000140461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027210	Meis2	ENSMUST00000150477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000110906	ENSMUSP00000106531	TRANSLATION	protein_coding	-	CCDS50665.1	2	400	0	2.5	10.8	226	0	-4,-5	-	-	14.8	MINOR
ENSMUSG00000027210	Meis2	ENSMUST00000074285	ENSMUSP00000073898	TRANSLATION	protein_coding	-	CCDS50664.1	1	393	0	2.5	12.8	226	0	-4,-5	-	-	15.372	ALTERNATIVE:1
ENSMUSG00000027210	Meis2	ENSMUST00000177493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000189640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027210	Meis2	ENSMUST00000120995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000135543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027210	Meis2	ENSMUST00000028639	ENSMUSP00000028639	TRANSLATION	protein_coding	-	CCDS50667.1	1	477	0	2.5	12.8	226	0	-4,-5	-	-	15.372	ALTERNATIVE:1
ENSMUSG00000027210	Meis2	ENSMUST00000102538	ENSMUSP00000099597	TRANSLATION	protein_coding	-	CCDS16568.1	1	470	0	2.5	12.8	226	0	-4,-5	-	-	15.372	PRINCIPAL:3
ENSMUSG00000027210	Meis2	ENSMUST00000110907	ENSMUSP00000106532	TRANSLATION	protein_coding	-	CCDS50668.1	1	401	0	2.5	15	226	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000027210	Meis2	ENSMUST00000151279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027210	Meis2	ENSMUST00000110908	ENSMUSP00000106533	TRANSLATION	protein_coding	-	CCDS50666.1	1	394	0	2.5	15	226	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000027634	Ndrg3	ENSMUST00000156651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000132748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000126627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027634	Ndrg3	ENSMUST00000072298	ENSMUSP00000072144	TRANSLATION	protein_coding	-	CCDS16971.1	1	375	0	7.825	8.8	422	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000027634	Ndrg3	ENSMUST00000156491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000140297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000149599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000131955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027634	Ndrg3	ENSMUST00000109558	ENSMUSP00000105185	TRANSLATION	protein_coding	-	-	1	253	0	6.2	0	324.6	0	-4,-5	-	-	2.904	MINOR
ENSMUSG00000027634	Ndrg3	ENSMUST00000069600	ENSMUSP00000070052	TRANSLATION	protein_coding	-	CCDS50780.1	1	388	0	7.825	7.8	422	0	-4,-5	-	-	14.616	ALTERNATIVE:1
ENSMUSG00000048222	Mfap1b	ENSMUST00000056732	ENSMUSP00000049548	TRANSLATION	protein_coding	-	CCDS38217.1	1	439	0	2	15	261.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000027513	Pck1	ENSMUST00000150629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027513	Pck1	ENSMUST00000029017	ENSMUSP00000029017	TRANSLATION	protein_coding	-	CCDS17141.1	1	622	33	9	6.3	560.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027513	Pck1	ENSMUST00000136885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027513	Pck1	ENSMUST00000151269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009214	Mymk	ENSMUST00000163967	ENSMUSP00000128491	TRANSLATION	protein_coding	-	CCDS50545.1	3	180	0	0	0.5	109.4	4	-4,-7	-	-	2.958	MINOR
ENSMUSG00000009214	Mymk	ENSMUST00000009358	ENSMUSP00000009358	TRANSLATION	protein_coding	-	CCDS15823.1	1	221	0	0	13.8	160.1	5	0,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000002109	Ddb2	ENSMUST00000135927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002109	Ddb2	ENSMUST00000111352	ENSMUSP00000106984	TRANSLATION	protein_coding	-	-	1	296	0	6.75	0	35.6	0	-4,-6	-	-	6	MINOR
ENSMUSG00000002109	Ddb2	ENSMUST00000150427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002109	Ddb2	ENSMUST00000152277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002109	Ddb2	ENSMUST00000028696	ENSMUSP00000028696	TRANSLATION	protein_coding	-	CCDS16428.1	1	432	0	9.75	1.5	35.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075149	Olfr1138	ENSMUST00000214573	ENSMUSP00000148941	TRANSLATION	protein_coding	-	CCDS16305.1	5	311	0	0.3	2.7	153.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075149	Olfr1138	ENSMUST00000099848	ENSMUSP00000097435	TRANSLATION	protein_coding	-	CCDS16305.1	-	311	0	0.3	2.7	153.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070730	Rmdn3	ENSMUST00000127965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070730	Rmdn3	ENSMUST00000135419	ENSMUSP00000123373	TRANSLATION	protein_coding	stop	-	5	82	0	0	0	0	1	-2,-6	-	-	-1	MINOR
ENSMUSG00000070730	Rmdn3	ENSMUST00000094695	ENSMUSP00000092283	TRANSLATION	protein_coding	-	CCDS16591.1	1	470	0	0	5.1	0	1	-2,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000070730	Rmdn3	ENSMUST00000129351	ENSMUSP00000119498	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	1	-2,-6	-	-	-1	MINOR
ENSMUSG00000070730	Rmdn3	ENSMUST00000156332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070730	Rmdn3	ENSMUST00000139519	ENSMUSP00000115973	TRANSLATION	protein_coding	stop	-	1	68	0	0	0	0	1	-2,-6	-	-	-1	MINOR
ENSMUSG00000070730	Rmdn3	ENSMUST00000130249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048186	Bend7	ENSMUST00000056914	ENSMUSP00000052458	TRANSLATION	protein_coding	-	CCDS15658.1	1	434	0	0	0.5	64.8	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000048186	Bend7	ENSMUST00000138322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048186	Bend7	ENSMUST00000115022	ENSMUSP00000110674	TRANSLATION	protein_coding	-	-	1	401	0	0	0	64.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000048186	Bend7	ENSMUST00000184139	ENSMUSP00000139220	TRANSLATION	protein_coding	-	CCDS70974.1	1	433	0	0	0.5	64.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000026983	Il1f5	ENSMUST00000195464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026983	Il1f5	ENSMUST00000147885	ENSMUSP00000141512	TRANSLATION	protein_coding	-	-	1	82	0	2.41	0	0	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000026983	Il1f5	ENSMUST00000028360	ENSMUSP00000028360	TRANSLATION	protein_coding	-	CCDS50519.1	1	156	0	3.41	5.1	77.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026983	Il1f5	ENSMUST00000123053	ENSMUSP00000116122	TRANSLATION	protein_coding	stop	-	2	72	0	2.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026983	Il1f5	ENSMUST00000123577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026983	Il1f5	ENSMUST00000114490	ENSMUSP00000110134	TRANSLATION	protein_coding	-	CCDS50519.1	1	156	0	3.41	5.1	77.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026983	Il1f5	ENSMUST00000168941	ENSMUSP00000126028	TRANSLATION	protein_coding	-	CCDS50519.1	5	156	0	3.41	5.1	77.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027304	Rtf1	ENSMUST00000126984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027304	Rtf1	ENSMUST00000028767	ENSMUSP00000028767	TRANSLATION	protein_coding	-	CCDS50673.1	1	715	0	3.5	5.1	126.3	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000027304	Rtf1	ENSMUST00000136321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027304	Rtf1	ENSMUST00000149904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026969	Fam166a	ENSMUST00000139988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026969	Fam166a	ENSMUST00000028346	ENSMUSP00000028346	TRANSLATION	protein_coding	-	CCDS15752.1	1	319	0	0	3.9	48.7	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000075092	Olfr1232	ENSMUST00000099785	ENSMUSP00000097373	TRANSLATION	protein_coding	-	CCDS16375.1	-	311	0	0.28	2.8	167.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075092	Olfr1232	ENSMUST00000215679	ENSMUSP00000150307	TRANSLATION	protein_coding	-	CCDS16375.1	5	311	0	0.28	2.8	167.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075092	Olfr1232	ENSMUST00000213860	ENSMUSP00000150860	TRANSLATION	protein_coding	-	CCDS16375.1	3	311	0	0.28	2.8	167.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000000823	Zfp512b	ENSMUST00000150552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000823	Zfp512b	ENSMUST00000133598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000823	Zfp512b	ENSMUST00000140103	ENSMUSP00000123579	TRANSLATION	protein_coding	start	-	5	65	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000823	Zfp512b	ENSMUST00000131866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000823	Zfp512b	ENSMUST00000108789	ENSMUSP00000104417	TRANSLATION	protein_coding	-	CCDS50855.1	1	869	23	3.04	0.5	15.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000000823	Zfp512b	ENSMUST00000155947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000823	Zfp512b	ENSMUST00000128553	ENSMUSP00000115601	TRANSLATION	protein_coding	start	-	1	879	23	3.04	0	15.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000823	Zfp512b	ENSMUST00000135561	ENSMUSP00000121721	TRANSLATION	protein_coding	start	-	5	55	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000823	Zfp512b	ENSMUST00000153998	ENSMUSP00000123096	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000823	Zfp512b	ENSMUST00000132538	ENSMUSP00000119677	TRANSLATION	nonsense_mediated_decay	start	-	3	103	8	2.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042851	Zc3h6	ENSMUST00000110320	ENSMUSP00000105949	TRANSLATION	protein_coding	-	CCDS50707.1	2	1177	12	2.2	0.5	45.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042851	Zc3h6	ENSMUST00000110319	ENSMUSP00000105948	TRANSLATION	protein_coding	-	-	1	151	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039787	Cercam	ENSMUST00000154464	ENSMUSP00000119476	TRANSLATION	protein_coding	stop	-	2	91	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039787	Cercam	ENSMUST00000134152	ENSMUSP00000115902	TRANSLATION	protein_coding	start/stop	-	3	159	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039787	Cercam	ENSMUST00000047521	ENSMUSP00000041622	TRANSLATION	protein_coding	-	CCDS15860.1	1	592	0	0	0.5	152.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000039787	Cercam	ENSMUST00000153863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039787	Cercam	ENSMUST00000155355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042548	Asxl1	ENSMUST00000123215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042548	Asxl1	ENSMUST00000144722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042548	Asxl1	ENSMUST00000138571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042548	Asxl1	ENSMUST00000227428	ENSMUSP00000154224	TRANSLATION	protein_coding	-	-	-	1513	6	0	0.5	198.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000042548	Asxl1	ENSMUST00000109790	ENSMUSP00000105413	TRANSLATION	protein_coding	-	CCDS38285.1	5	1514	6	0	0.5	198.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000061136	Prpf40a	ENSMUST00000152922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061136	Prpf40a	ENSMUST00000125243	ENSMUSP00000117406	TRANSLATION	nonsense_mediated_decay	start	-	5	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061136	Prpf40a	ENSMUST00000211712	ENSMUSP00000147939	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000061136	Prpf40a	ENSMUST00000076313	ENSMUSP00000075655	TRANSLATION	protein_coding	start	-	1	966	0	7.44	0.5	250	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000061136	Prpf40a	ENSMUST00000210789	ENSMUSP00000147599	TRANSLATION	protein_coding	-	-	5	926	0	7.44	0.5	250	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000061136	Prpf40a	ENSMUST00000209508	ENSMUSP00000147910	TRANSLATION	nonsense_mediated_decay	-	-	5	144	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000061136	Prpf40a	ENSMUST00000211102	ENSMUSP00000148161	TRANSLATION	nonsense_mediated_decay	start	-	5	84	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061136	Prpf40a	ENSMUST00000132031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061136	Prpf40a	ENSMUST00000133384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061136	Prpf40a	ENSMUST00000239398	ENSMUSP00000159339	TRANSLATION	protein_coding	-	CCDS16038.1	-	953	0	7.44	1.5	250	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000061136	Prpf40a	ENSMUST00000209364	ENSMUSP00000147671	TRANSLATION	protein_coding	-	-	5	926	0	7.44	0.5	250	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027255	Arfgap2	ENSMUST00000150701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027255	Arfgap2	ENSMUST00000146228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027255	Arfgap2	ENSMUST00000028691	ENSMUSP00000028691	TRANSLATION	protein_coding	-	CCDS50639.1	1	534	4	3.65	7.6	110	0	-4,-6	-	-	19	ALTERNATIVE:1
ENSMUSG00000027255	Arfgap2	ENSMUST00000127895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027255	Arfgap2	ENSMUST00000150753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027255	Arfgap2	ENSMUST00000128296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027255	Arfgap2	ENSMUST00000080008	ENSMUSP00000078920	TRANSLATION	protein_coding	-	CCDS16430.1	1	520	4	3.65	7.6	110	0	-4,-6	-	-	19	PRINCIPAL:3
ENSMUSG00000062757	Olfr1206	ENSMUST00000216950	ENSMUSP00000149929	TRANSLATION	protein_coding	-	CCDS16353.1	5	307	0	0.28	8.8	161.1	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000062757	Olfr1206	ENSMUST00000077302	ENSMUSP00000076532	TRANSLATION	protein_coding	-	CCDS16353.1	-	307	0	0.28	8.8	161.1	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026712	Mrc1	ENSMUST00000146168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026712	Mrc1	ENSMUST00000028045	ENSMUSP00000028045	TRANSLATION	protein_coding	-	CCDS15700.1	1	1456	36	16.06	1.5	662.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000027111	Itga6	ENSMUST00000152009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027111	Itga6	ENSMUST00000028522	ENSMUSP00000028522	TRANSLATION	protein_coding	-	CCDS16118.1	1	1073	22	11.715	7.6	515.4	1	4,-1	-	-	20.136	PRINCIPAL:3
ENSMUSG00000027111	Itga6	ENSMUST00000155249	ENSMUSP00000118086	TRANSLATION	protein_coding	start	-	1	667	10	7.38	0	451.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000027111	Itga6	ENSMUST00000133124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027111	Itga6	ENSMUST00000126787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027111	Itga6	ENSMUST00000238991	ENSMUSP00000158895	TRANSLATION	protein_coding	-	-	-	1130	22	11.915	0	492.6	1	4,-1	-	-	16.632	MINOR
ENSMUSG00000027111	Itga6	ENSMUST00000155596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027111	Itga6	ENSMUST00000112101	ENSMUSP00000107729	TRANSLATION	protein_coding	-	CCDS71074.1	5	1091	22	11.715	8.8	492.6	1	4,-1	-	-	19.23	ALTERNATIVE:1
ENSMUSG00000027111	Itga6	ENSMUST00000139760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027474	Ccm2l	ENSMUST00000109800	ENSMUSP00000105425	TRANSLATION	protein_coding	-	CCDS50755.1	5	481	0	2.65	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000027474	Ccm2l	ENSMUST00000238488	ENSMUSP00000158754	TRANSLATION	protein_coding	-	-	-	564	0	5.67	0.5	159.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027474	Ccm2l	ENSMUST00000127549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027474	Ccm2l	ENSMUST00000129377	ENSMUSP00000122732	TRANSLATION	protein_coding	stop	-	3	136	0	2.15	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027474	Ccm2l	ENSMUST00000127898	ENSMUSP00000158822	TRANSLATION	nonsense_mediated_decay	-	-	1	192	0	2.65	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044213	Olfr1094	ENSMUST00000105211	ENSMUSP00000100846	TRANSLATION	protein_coding	-	CCDS16269.1	-	330	0	0	1.5	172.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044213	Olfr1094	ENSMUST00000217509	ENSMUSP00000148902	TRANSLATION	protein_coding	-	CCDS16269.1	5	330	0	0	1.5	172.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000017412	Cacnb4	ENSMUST00000178799	ENSMUSP00000136811	TRANSLATION	protein_coding	-	-	5	519	0	9.514	5.1	236.5	0	-4,-7	-	-	12.278	MINOR
ENSMUSG00000017412	Cacnb4	ENSMUST00000148837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017412	Cacnb4	ENSMUST00000102761	ENSMUSP00000099822	TRANSLATION	protein_coding	-	CCDS71052.1	1	473	0	9.58	5.2	236.5	0	-4,-5	-	-	12.446	MINOR
ENSMUSG00000017412	Cacnb4	ENSMUST00000078324	ENSMUSP00000077438	TRANSLATION	protein_coding	-	CCDS16034.1	1	519	0	9.58	5.1	236.5	0	-4,-7	-	-	12.41	MINOR
ENSMUSG00000017412	Cacnb4	ENSMUST00000102760	ENSMUSP00000099821	TRANSLATION	protein_coding	-	CCDS16035.1	1	486	0	10.08	12.6	236.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017412	Cacnb4	ENSMUST00000132322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090100	Ttbk2	ENSMUST00000028740	ENSMUSP00000028740	TRANSLATION	protein_coding	-	CCDS16626.1	1	1312	0	8.25	0.5	105.8	0	-4,-2	-	-	12	MINOR
ENSMUSG00000090100	Ttbk2	ENSMUST00000143051	ENSMUSP00000121996	TRANSLATION	protein_coding	stop	-	1	872	0	8.25	0	105.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090100	Ttbk2	ENSMUST00000141921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090100	Ttbk2	ENSMUST00000057135	ENSMUSP00000055032	TRANSLATION	protein_coding	-	CCDS16627.1	1	1243	0	8.25	6.3	105.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000090100	Ttbk2	ENSMUST00000085840	ENSMUSP00000083001	TRANSLATION	protein_coding	-	CCDS16627.1	5	1243	0	8.25	6.3	105.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000090100	Ttbk2	ENSMUST00000131389	ENSMUSP00000118905	TRANSLATION	protein_coding	stop	-	5	436	0	7.25	0	64.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063364	3300002I08Rik	ENSMUST00000138130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063364	3300002I08Rik	ENSMUST00000152036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063364	3300002I08Rik	ENSMUST00000051153	ENSMUSP00000055454	TRANSLATION	protein_coding	-	CCDS50740.1	1	147	0	1.6	0.5	83	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000063364	3300002I08Rik	ENSMUST00000124945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098387	Pet117	ENSMUST00000183618	ENSMUSP00000139043	TRANSLATION	protein_coding	-	CCDS71155.1	2	80	0	0	7.8	81.8	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000027349	Fam98b	ENSMUST00000143612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027349	Fam98b	ENSMUST00000140936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027349	Fam98b	ENSMUST00000028825	ENSMUSP00000028825	TRANSLATION	protein_coding	-	CCDS16571.1	1	429	0	0	0.5	440.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027261	Hao1	ENSMUST00000028704	ENSMUSP00000028704	TRANSLATION	protein_coding	-	CCDS16783.1	1	370	22	7.5	3.9	459.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027261	Hao1	ENSMUST00000140794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018209	Stk4	ENSMUST00000088291	ENSMUSP00000085629	TRANSLATION	protein_coding	-	-	1	126	0	1.4	0	85.7	0	-4,-2	-	-	0	MINOR
ENSMUSG00000018209	Stk4	ENSMUST00000018353	ENSMUSP00000018353	TRANSLATION	protein_coding	-	CCDS17021.1	1	487	19	9.31	10.8	329.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018209	Stk4	ENSMUST00000137866	ENSMUSP00000116745	TRANSLATION	protein_coding	start	-	2	201	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018209	Stk4	ENSMUST00000153319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018209	Stk4	ENSMUST00000134078	ENSMUSP00000122440	TRANSLATION	protein_coding	stop	-	3	113	15	3.014	0	78.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039195	1110008P14Rik	ENSMUST00000048792	ENSMUSP00000038970	TRANSLATION	protein_coding	-	CCDS38103.1	1	83	0	0	7.5	144	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039195	1110008P14Rik	ENSMUST00000146423	ENSMUSP00000142021	TRANSLATION	protein_coding	-	-	1	52	0	0	0	25.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027246	Ell3	ENSMUST00000028679	ENSMUSP00000028679	TRANSLATION	protein_coding	-	CCDS16644.1	1	395	0	2.8	0.5	144.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027246	Ell3	ENSMUST00000153866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027246	Ell3	ENSMUST00000116432	ENSMUSP00000112133	TRANSLATION	protein_coding	-	CCDS16644.1	1	395	0	2.8	0.5	144.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027378	Nphp1	ENSMUST00000110357	ENSMUSP00000105986	TRANSLATION	protein_coding	-	CCDS71140.1	1	690	0	2.2	0.5	56.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027378	Nphp1	ENSMUST00000148033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027378	Nphp1	ENSMUST00000144938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027378	Nphp1	ENSMUST00000028857	ENSMUSP00000028857	TRANSLATION	protein_coding	-	CCDS16709.1	1	691	0	2.2	0.5	56.6	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000041762	Gpr155	ENSMUST00000184503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041762	Gpr155	ENSMUST00000076463	ENSMUSP00000075788	TRANSLATION	protein_coding	-	CCDS50606.1	1	868	0	0.6	0.5	49.3	23	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041762	Gpr155	ENSMUST00000131430	ENSMUSP00000114294	TRANSLATION	protein_coding	start	-	3	218	0	0	0	0	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000041762	Gpr155	ENSMUST00000129184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041762	Gpr155	ENSMUST00000112043	ENSMUSP00000107674	TRANSLATION	protein_coding	-	CCDS50606.1	5	868	0	0.6	0.5	49.3	23	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041762	Gpr155	ENSMUST00000048504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041762	Gpr155	ENSMUST00000134595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041762	Gpr155	ENSMUST00000112044	ENSMUSP00000107675	TRANSLATION	protein_coding	-	CCDS71075.1	5	840	0	0.6	0.5	49.3	22	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000111306	Olfr1065	ENSMUST00000216162	ENSMUSP00000149089	TRANSLATION	protein_coding	-	CCDS16256.1	3	313	0	0.32	1.5	179.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111306	Olfr1065	ENSMUST00000216165	ENSMUSP00000150875	TRANSLATION	protein_coding	-	CCDS16256.1	-	313	0	0.32	1.5	179.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111306	Olfr1065	ENSMUST00000217586	ENSMUSP00000149248	TRANSLATION	protein_coding	-	CCDS16256.1	5	313	0	0.32	1.5	179.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111306	Olfr1065	ENSMUST00000213789	ENSMUSP00000150862	TRANSLATION	protein_coding	-	CCDS16256.1	3	313	0	0.32	1.5	179.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026771	Spopl	ENSMUST00000028110	ENSMUSP00000141519	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	3.5	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026771	Spopl	ENSMUST00000132484	ENSMUSP00000114974	TRANSLATION	protein_coding	-	CCDS15730.1	5	392	0	8.08	17.3	137.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026771	Spopl	ENSMUST00000132827	ENSMUSP00000142047	TRANSLATION	nonsense_mediated_decay	-	-	1	190	0	3.83	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026771	Spopl	ENSMUST00000195415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026771	Spopl	ENSMUST00000123843	ENSMUSP00000142158	TRANSLATION	nonsense_mediated_decay	-	-	3	72	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026771	Spopl	ENSMUST00000136290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027371	Fahd2a	ENSMUST00000146437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027371	Fahd2a	ENSMUST00000123327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027371	Fahd2a	ENSMUST00000146615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027371	Fahd2a	ENSMUST00000146757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027371	Fahd2a	ENSMUST00000137366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027371	Fahd2a	ENSMUST00000137502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027371	Fahd2a	ENSMUST00000028848	ENSMUSP00000028848	TRANSLATION	protein_coding	-	CCDS16702.1	1	313	6	5.05	5.1	240.1	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000075146	Olfr1154	ENSMUST00000099844	ENSMUSP00000097432	TRANSLATION	protein_coding	-	CCDS16315.1	-	310	0	0	2.7	158.4	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000075146	Olfr1154	ENSMUST00000215862	ENSMUSP00000148909	TRANSLATION	protein_coding	-	CCDS16315.1	5	310	0	0	2.7	158.4	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000075146	Olfr1154	ENSMUST00000215017	ENSMUSP00000149078	TRANSLATION	protein_coding	-	CCDS16315.1	5	310	0	0	2.7	158.4	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027365	Trpm7	ENSMUST00000135733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000134408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000028843	ENSMUSP00000028843	TRANSLATION	protein_coding	-	CCDS50700.1	1	1862	18	7.5	6.3	261.6	4	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000027365	Trpm7	ENSMUST00000155675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000125327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027365	Trpm7	ENSMUST00000127277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000152615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000132003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000103224	ENSMUSP00000099513	TRANSLATION	protein_coding	-	CCDS16689.1	1	1863	18	7.5	6.3	261.6	4	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000027365	Trpm7	ENSMUST00000142334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027365	Trpm7	ENSMUST00000136964	ENSMUSP00000119232	TRANSLATION	protein_coding	start/stop	-	3	268	18	4.15	0	125.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040812	Agbl2	ENSMUST00000037206	ENSMUSP00000047936	TRANSLATION	protein_coding	-	-	1	809	2	0.9	0.5	60.7	0	-4,-5	-	-	13.952	ALTERNATIVE:2
ENSMUSG00000040812	Agbl2	ENSMUST00000149361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040812	Agbl2	ENSMUST00000149037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040812	Agbl2	ENSMUST00000051831	ENSMUSP00000051620	TRANSLATION	nonsense_mediated_decay	-	-	1	836	2	0.9	0	61.2	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040812	Agbl2	ENSMUST00000136058	ENSMUSP00000115632	TRANSLATION	protein_coding	stop	-	1	711	2	0.9	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040812	Agbl2	ENSMUST00000170320	ENSMUSP00000129216	TRANSLATION	protein_coding	-	CCDS38177.2	1	862	2	0.9	0.5	60.7	0	-3,-5	-	-	13.952	PRINCIPAL:2
ENSMUSG00000040812	Agbl2	ENSMUST00000037219	ENSMUSP00000048647	TRANSLATION	protein_coding	-	CCDS38177.2	1	862	2	0.9	0.5	60.7	0	-3,-5	-	-	13.952	PRINCIPAL:2
ENSMUSG00000040812	Agbl2	ENSMUST00000111481	ENSMUSP00000107106	TRANSLATION	protein_coding	-	CCDS38177.2	5	862	2	0.9	0.5	60.7	0	-3,-5	-	-	13.952	PRINCIPAL:2
ENSMUSG00000055838	Olfr357	ENSMUST00000069578	ENSMUSP00000066272	TRANSLATION	protein_coding	-	CCDS15990.1	-	308	0	0.36	1.5	179.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055838	Olfr357	ENSMUST00000213218	ENSMUSP00000149727	TRANSLATION	protein_coding	-	CCDS15990.1	5	308	0	0.36	1.5	179.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034906	Ncaph	ENSMUST00000177191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034906	Ncaph	ENSMUST00000152806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034906	Ncaph	ENSMUST00000175885	ENSMUSP00000135620	TRANSLATION	nonsense_mediated_decay	start	-	5	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034906	Ncaph	ENSMUST00000110387	ENSMUSP00000106017	TRANSLATION	protein_coding	-	CCDS16693.2	1	731	0	0	0.5	522.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034906	Ncaph	ENSMUST00000156625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034906	Ncaph	ENSMUST00000146142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026924	Sec16a	ENSMUST00000153996	ENSMUSP00000121179	TRANSLATION	protein_coding	start/stop	-	3	247	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026924	Sec16a	ENSMUST00000156442	ENSMUSP00000122255	TRANSLATION	protein_coding	start	-	1	907	0	0	0	31	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026924	Sec16a	ENSMUST00000149010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026924	Sec16a	ENSMUST00000155252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026924	Sec16a	ENSMUST00000154486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026924	Sec16a	ENSMUST00000148306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026924	Sec16a	ENSMUST00000114082	ENSMUSP00000109716	TRANSLATION	protein_coding	-	-	5	2377	0	0	0.5	31	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000026924	Sec16a	ENSMUST00000091252	ENSMUSP00000088796	TRANSLATION	protein_coding	-	CCDS38085.1	5	2357	0	0	0.5	31	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000014959	Gorasp2	ENSMUST00000112201	ENSMUSP00000107820	TRANSLATION	protein_coding	-	-	1	431	0	4.5	0	179.6	0	-4,-5	-	-	10.32	MINOR
ENSMUSG00000014959	Gorasp2	ENSMUST00000112205	ENSMUSP00000107824	TRANSLATION	protein_coding	-	-	1	351	0	5.25	0	182.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000014959	Gorasp2	ENSMUST00000136485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014959	Gorasp2	ENSMUST00000130970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014959	Gorasp2	ENSMUST00000028509	ENSMUSP00000028509	TRANSLATION	protein_coding	-	CCDS16109.1	1	451	0	5.25	1.5	182.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000014959	Gorasp2	ENSMUST00000133432	ENSMUSP00000121549	TRANSLATION	protein_coding	-	-	1	317	0	5.25	0	182.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026890	Lhx6	ENSMUST00000112966	ENSMUSP00000108590	TRANSLATION	protein_coding	-	CCDS38111.1	1	348	15	4.43	1.7	181.5	0	-4,-6	-	-	18.318	MINOR
ENSMUSG00000026890	Lhx6	ENSMUST00000136821	ENSMUSP00000135776	TRANSLATION	protein_coding	start	-	3	170	0	2.35	0	71.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026890	Lhx6	ENSMUST00000187180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026890	Lhx6	ENSMUST00000112960	ENSMUSP00000108584	TRANSLATION	protein_coding	-	CCDS38112.1	2	392	15	4.43	7.6	181.5	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000026890	Lhx6	ENSMUST00000148852	ENSMUSP00000135693	TRANSLATION	protein_coding	-	CCDS38111.1	5	348	15	4.43	1.7	181.5	0	-4,-6	-	-	18.318	MINOR
ENSMUSG00000026890	Lhx6	ENSMUST00000112961	ENSMUSP00000108585	TRANSLATION	protein_coding	-	CCDS38113.1	1	363	15	4.43	3	181.5	0	-4,-6	-	-	18.909	MINOR
ENSMUSG00000026890	Lhx6	ENSMUST00000112967	ENSMUSP00000108591	TRANSLATION	protein_coding	-	CCDS38110.1	1	377	15	4.43	6.4	181.5	0	-4,-5	-	-	20.454	PRINCIPAL:3
ENSMUSG00000026890	Lhx6	ENSMUST00000112963	ENSMUSP00000108587	TRANSLATION	protein_coding	-	CCDS38113.1	2	363	15	4.43	3	181.5	0	-4,-6	-	-	18.909	MINOR
ENSMUSG00000026890	Lhx6	ENSMUST00000137436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109033	Olfr1315-ps1	ENSMUST00000217078	ENSMUSP00000149894	TRANSLATION	protein_coding	-	-	5	312	0	0.3	5.1	138.4	6	-3,-4	-	-	14	ALTERNATIVE:1
ENSMUSG00000109033	Olfr1315-ps1	ENSMUST00000207542	ENSMUSP00000146586	TRANSLATION	protein_coding	-	-	5	312	0	0.3	5.1	138.4	6	-3,-4	-	-	14	ALTERNATIVE:1
ENSMUSG00000109033	Olfr1315-ps1	ENSMUST00000208654	ENSMUSP00000146692	TRANSLATION	protein_coding	-	-	-	314	0	0.3	5.1	138.4	6	-3,-4	-	-	14	PRINCIPAL:5
ENSMUSG00000036924	Cst13	ENSMUST00000046589	ENSMUSP00000036005	TRANSLATION	protein_coding	-	CCDS16849.1	1	141	0	2.2	3.9	61.1	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000075415	Fnbp1	ENSMUST00000136085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075415	Fnbp1	ENSMUST00000100207	ENSMUSP00000097781	TRANSLATION	protein_coding	-	-	5	559	0	13.08	4.1	103	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000075326	ENSMUSP00000074796	TRANSLATION	protein_coding	-	-	5	586	0	13.08	3.6	103	0	-4,-5	-	-	12.982	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000100208	ENSMUSP00000097782	TRANSLATION	protein_coding	-	-	5	615	0	13.08	4.1	103	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000113552	ENSMUSP00000109181	TRANSLATION	protein_coding	-	CCDS15894.1	1	338	0	8.33	0.5	68.5	0	-4,-5	-	-	3.93	MINOR
ENSMUSG00000075415	Fnbp1	ENSMUST00000113555	ENSMUSP00000109184	TRANSLATION	protein_coding	-	-	5	591	0	13.08	3.6	103	0	-4,-5	-	-	12.982	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000113560	ENSMUSP00000109190	TRANSLATION	protein_coding	-	CCDS50561.1	1	616	0	13.08	6.3	103	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000075415	Fnbp1	ENSMUST00000113562	ENSMUSP00000109192	TRANSLATION	protein_coding	-	CCDS38097.1	1	550	0	13.08	4.1	103	0	-4,-5	-	-	13.17	PRINCIPAL:3
ENSMUSG00000075415	Fnbp1	ENSMUST00000073879	ENSMUSP00000109188	TRANSLATION	protein_coding	-	-	5	554	0	13.08	4.1	103	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000113559	ENSMUSP00000109189	TRANSLATION	protein_coding	-	CCDS50560.1	1	522	0	10.75	0.5	34.5	0	-4,-5	-	-	3.228	MINOR
ENSMUSG00000075415	Fnbp1	ENSMUST00000113564	ENSMUSP00000109194	TRANSLATION	protein_coding	-	CCDS57165.1	1	551	0	13.08	4.1	103	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000075415	Fnbp1	ENSMUST00000136181	ENSMUSP00000120580	TRANSLATION	protein_coding	stop	-	5	160	0	4.58	0	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075415	Fnbp1	ENSMUST00000138581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075415	Fnbp1	ENSMUST00000149196	ENSMUSP00000121282	TRANSLATION	protein_coding	stop	-	3	208	0	5.5	0	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075415	Fnbp1	ENSMUST00000128431	ENSMUSP00000141681	TRANSLATION	protein_coding	start/stop	-	5	355	0	5.33	0	23.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075415	Fnbp1	ENSMUST00000128500	ENSMUSP00000115013	TRANSLATION	protein_coding	start	-	5	388	0	9.5	0	98.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044042	Fmn1	ENSMUST00000110954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044042	Fmn1	ENSMUST00000150510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044042	Fmn1	ENSMUST00000161731	ENSMUSP00000125052	TRANSLATION	protein_coding	-	CCDS71112.1	1	1332	0	5.88	0.5	308.4	0	-4,-5	-	-	11.958	PRINCIPAL:4
ENSMUSG00000044042	Fmn1	ENSMUST00000238883	ENSMUSP00000159010	TRANSLATION	protein_coding	-	-	-	850	0	5.88	0.5	308.4	0	-4,-7	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000044042	Fmn1	ENSMUST00000081349	ENSMUSP00000080093	TRANSLATION	protein_coding	-	CCDS71113.1	1	1204	0	5.88	0.5	308.4	0	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000044042	Fmn1	ENSMUST00000102547	ENSMUSP00000099606	TRANSLATION	protein_coding	-	CCDS16559.1	1	1466	0	5.9	0.5	303.9	0	-4,-5	-	-	11.73	MINOR
ENSMUSG00000044042	Fmn1	ENSMUST00000152255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044042	Fmn1	ENSMUST00000145891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044042	Fmn1	ENSMUST00000099576	ENSMUSP00000097171	TRANSLATION	protein_coding	-	-	5	1430	0	5.88	0.5	308.4	0	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000044042	Fmn1	ENSMUST00000153151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044042	Fmn1	ENSMUST00000154834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009551	6330409D20Rik	ENSMUST00000009695	ENSMUSP00000009695	TRANSLATION	protein_coding	-	CCDS57169.1	1	162	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000009551	6330409D20Rik	ENSMUST00000151536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052033	Pfdn4	ENSMUST00000139328	ENSMUSP00000127453	TRANSLATION	protein_coding	stop	-	2	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000075087	ENSMUSP00000074596	TRANSLATION	protein_coding	-	CCDS50808.1	1	77	0	0	1.5	58.9	0	-4,-5	-	-	4.132	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000170167	ENSMUSP00000131911	TRANSLATION	protein_coding	stop	-	2	47	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000109147	ENSMUSP00000104775	TRANSLATION	protein_coding	stop	-	2	49	0	0	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000109148	ENSMUSP00000104776	TRANSLATION	protein_coding	-	CCDS50808.1	3	77	0	0	1.5	58.9	0	-4,-5	-	-	4.132	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000136839	ENSMUSP00000130383	TRANSLATION	protein_coding	-	CCDS57190.1	1	130	0	0	0.5	77.8	0	-4,-5	-	-	5.124	MINOR
ENSMUSG00000052033	Pfdn4	ENSMUST00000063682	ENSMUSP00000070596	TRANSLATION	protein_coding	-	CCDS50807.1	1	134	0	0	3	91.1	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000027579	Srms	ENSMUST00000016498	ENSMUSP00000016498	TRANSLATION	protein_coding	-	CCDS17204.1	1	507	17	6.88	1.5	418.9	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070708	Gtsf1l	ENSMUST00000094653	ENSMUSP00000092237	TRANSLATION	protein_coding	-	CCDS17007.1	-	151	6	0	0.5	67.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035829	Ppp1r26	ENSMUST00000154081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035829	Ppp1r26	ENSMUST00000189694	ENSMUSP00000139546	TRANSLATION	protein_coding	-	CCDS15836.1	1	1163	0	0	0.5	1030.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035829	Ppp1r26	ENSMUST00000128199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035829	Ppp1r26	ENSMUST00000040324	ENSMUSP00000042173	TRANSLATION	protein_coding	-	CCDS15836.1	1	1163	0	0	0.5	1030.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035829	Ppp1r26	ENSMUST00000150362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035877	Zhx3	ENSMUST00000176141	ENSMUSP00000134763	TRANSLATION	protein_coding	stop	-	2	114	5	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035877	Zhx3	ENSMUST00000103112	ENSMUSP00000099401	TRANSLATION	protein_coding	-	CCDS16997.1	1	951	8	0.5	1.5	140	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035877	Zhx3	ENSMUST00000103111	ENSMUSP00000099400	TRANSLATION	protein_coding	-	CCDS16997.1	1	951	8	0.5	1.5	140	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035877	Zhx3	ENSMUST00000109460	ENSMUSP00000105086	TRANSLATION	protein_coding	-	CCDS16997.1	1	951	8	0.5	1.5	140	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035877	Zhx3	ENSMUST00000133937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035877	Zhx3	ENSMUST00000127201	ENSMUSP00000120488	TRANSLATION	protein_coding	stop	-	2	101	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026798	Coq4	ENSMUST00000028137	ENSMUSP00000028137	TRANSLATION	protein_coding	-	CCDS15857.1	1	266	3	2.911	1.5	321.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000026798	Coq4	ENSMUST00000143616	ENSMUSP00000120160	TRANSLATION	nonsense_mediated_decay	-	-	1	140	0	0.925	0	104.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026798	Coq4	ENSMUST00000142694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026798	Coq4	ENSMUST00000138233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026798	Coq4	ENSMUST00000176348	ENSMUSP00000135687	TRANSLATION	nonsense_mediated_decay	-	-	1	140	0	0.925	0	104.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026798	Coq4	ENSMUST00000148791	ENSMUSP00000116944	TRANSLATION	protein_coding	stop	-	5	199	3	2.323	0	237	0	-4,0	-	-	-1	MINOR
ENSMUSG00000027412	Lpin3	ENSMUST00000109455	ENSMUSP00000105081	TRANSLATION	protein_coding	-	-	5	817	7	0	0	597.8	0	-4,-5	-	-	11.334	ALTERNATIVE:2
ENSMUSG00000027412	Lpin3	ENSMUST00000124920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027412	Lpin3	ENSMUST00000109456	ENSMUSP00000105082	TRANSLATION	protein_coding	-	CCDS16998.1	1	848	7	0	1.5	608.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027412	Lpin3	ENSMUST00000040872	ENSMUSP00000043053	TRANSLATION	protein_coding	-	CCDS16998.1	1	848	7	0	1.5	608.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027412	Lpin3	ENSMUST00000109457	ENSMUSP00000105083	TRANSLATION	protein_coding	-	-	1	858	7	0	0	603.6	0	-4,-5	-	-	11.682	ALTERNATIVE:2
ENSMUSG00000050587	Lrrc4c	ENSMUST00000135431	ENSMUSP00000130984	TRANSLATION	protein_coding	-	CCDS16460.1	1	640	0	1	8.8	140.5	1	0,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000050587	Lrrc4c	ENSMUST00000170144	ENSMUSP00000128490	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050587	Lrrc4c	ENSMUST00000162807	ENSMUSP00000125218	TRANSLATION	protein_coding	-	CCDS16460.1	1	640	0	1	8.8	140.5	1	0,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000050587	Lrrc4c	ENSMUST00000059049	ENSMUSP00000131795	TRANSLATION	protein_coding	-	CCDS16460.1	1	640	0	1	8.8	140.5	1	0,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027242	Wdr76	ENSMUST00000110602	ENSMUSP00000106232	TRANSLATION	protein_coding	-	CCDS38218.1	1	524	0	3.23	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000027242	Wdr76	ENSMUST00000028676	ENSMUSP00000028676	TRANSLATION	protein_coding	-	CCDS38218.1	1	524	0	3.23	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000027242	Wdr76	ENSMUST00000099473	ENSMUSP00000097072	TRANSLATION	protein_coding	-	-	1	320	0	1.7	0	0	0	-4,-5	-	-	2.94	MINOR
ENSMUSG00000027242	Wdr76	ENSMUST00000110603	ENSMUSP00000106234	TRANSLATION	protein_coding	-	-	5	622	0	3.23	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027242	Wdr76	ENSMUST00000132373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032671	A930018P22Rik	ENSMUST00000040374	ENSMUSP00000044861	TRANSLATION	protein_coding	-	CCDS16488.1	1	194	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000038765	Lmx1b	ENSMUST00000239476	ENSMUSP00000159290	TRANSLATION	protein_coding	-	CCDS15944.1	-	372	16	3.6	0.5	182.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038765	Lmx1b	ENSMUST00000137559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038765	Lmx1b	ENSMUST00000176067	ENSMUSP00000134944	TRANSLATION	protein_coding	start	-	5	369	16	3.6	0	182.6	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000038765	Lmx1b	ENSMUST00000041730	ENSMUSP00000043616	TRANSLATION	protein_coding	-	-	1	401	16	3.6	0	182.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026764	Kif5c	ENSMUST00000127245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026764	Kif5c	ENSMUST00000138834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026764	Kif5c	ENSMUST00000146247	ENSMUSP00000117370	TRANSLATION	protein_coding	start/stop	-	5	243	0	2.33	0	75	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026764	Kif5c	ENSMUST00000132968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026764	Kif5c	ENSMUST00000028102	ENSMUSP00000028102	TRANSLATION	protein_coding	-	CCDS16024.1	1	956	11	9.83	10.8	372.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000026764	Kif5c	ENSMUST00000152353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108827	Olfr1310	ENSMUST00000207169	ENSMUSP00000146483	TRANSLATION	protein_coding	-	CCDS16540.1	-	312	0	0.36	7.6	138.8	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000108827	Olfr1310	ENSMUST00000213559	ENSMUSP00000149701	TRANSLATION	protein_coding	-	CCDS16540.1	5	312	0	0.36	7.6	138.8	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039050	Osbpl2	ENSMUST00000142376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039050	Osbpl2	ENSMUST00000140210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039050	Osbpl2	ENSMUST00000124225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039050	Osbpl2	ENSMUST00000040668	ENSMUSP00000046538	TRANSLATION	protein_coding	-	CCDS17170.1	1	484	0	5.25	1.5	486.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026878	Rab14	ENSMUST00000113025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000202602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000201694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000148543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026878	Rab14	ENSMUST00000155359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026878	Rab14	ENSMUST00000126224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026878	Rab14	ENSMUST00000230751	ENSMUSP00000155278	TRANSLATION	protein_coding	-	-	-	197	12	5.13	0	161.8	0	-4,-7	-	-	9.126	MINOR
ENSMUSG00000026878	Rab14	ENSMUST00000028238	ENSMUSP00000028238	TRANSLATION	protein_coding	-	CCDS15959.1	1	215	20	5.63	19.5	204.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026878	Rab14	ENSMUST00000142015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000137709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000201896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026878	Rab14	ENSMUST00000230657	ENSMUSP00000155540	TRANSLATION	protein_coding	start	-	-	83	7	2.83	0	87	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026878	Rab14	ENSMUST00000155483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027456	Sdcbp2	ENSMUST00000028950	ENSMUSP00000028950	TRANSLATION	protein_coding	-	CCDS16870.1	1	292	0	4.2	1.7	66.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036992	Nxt1	ENSMUST00000109961	ENSMUSP00000105587	TRANSLATION	protein_coding	-	CCDS16840.1	2	140	0	1	19.5	106.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036992	Nxt1	ENSMUST00000047177	ENSMUSP00000038329	TRANSLATION	protein_coding	-	CCDS16840.1	1	140	0	1	19.5	106.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027284	Cdan1	ENSMUST00000148285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027284	Cdan1	ENSMUST00000152692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027284	Cdan1	ENSMUST00000126753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027284	Cdan1	ENSMUST00000150860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027284	Cdan1	ENSMUST00000124906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027284	Cdan1	ENSMUST00000126133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027284	Cdan1	ENSMUST00000136725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027284	Cdan1	ENSMUST00000110700	ENSMUSP00000106328	TRANSLATION	protein_coding	-	-	5	1232	0	0	1	129.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027284	Cdan1	ENSMUST00000110701	ENSMUSP00000106329	TRANSLATION	protein_coding	-	CCDS38212.1	5	1239	0	0	0.5	129.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000027612	Mmp24	ENSMUST00000029141	ENSMUSP00000029141	TRANSLATION	protein_coding	-	CCDS16955.1	1	618	24	6.6	1.5	542.6	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000027612	Mmp24	ENSMUST00000135945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026810	Dpm2	ENSMUST00000128039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026810	Dpm2	ENSMUST00000150419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026810	Dpm2	ENSMUST00000140592	ENSMUSP00000124665	TRANSLATION	protein_coding	-	-	5	114	0	0	0	90.7	1	-4,-5	-	-	4.902	MINOR
ENSMUSG00000026810	Dpm2	ENSMUST00000028151	ENSMUSP00000028151	TRANSLATION	protein_coding	-	CCDS38104.1	1	84	0	0	17.5	109	2	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000038375	Trp53inp2	ENSMUST00000174685	ENSMUSP00000133880	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	65	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038375	Trp53inp2	ENSMUST00000151466	ENSMUSP00000121058	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	42.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038375	Trp53inp2	ENSMUST00000173406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038375	Trp53inp2	ENSMUST00000134218	ENSMUSP00000119169	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038375	Trp53inp2	ENSMUST00000043237	ENSMUSP00000037627	TRANSLATION	protein_coding	-	CCDS16947.1	1	221	0	0	6.3	118.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000048707	Tprn	ENSMUST00000114336	ENSMUSP00000109975	TRANSLATION	protein_coding	-	CCDS15759.2	1	749	0	0	1.5	324.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048707	Tprn	ENSMUST00000141509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048707	Tprn	ENSMUST00000137361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048707	Tprn	ENSMUST00000155738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002718	Cse1l	ENSMUST00000132402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002718	Cse1l	ENSMUST00000171410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002718	Cse1l	ENSMUST00000129061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002718	Cse1l	ENSMUST00000145819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002718	Cse1l	ENSMUST00000135139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002718	Cse1l	ENSMUST00000002790	ENSMUSP00000002790	TRANSLATION	protein_coding	-	CCDS17092.1	1	971	0	17.751	19.5	1187.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002718	Cse1l	ENSMUST00000164974	ENSMUSP00000128515	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	1.425	0	46.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002718	Cse1l	ENSMUST00000163917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002718	Cse1l	ENSMUST00000163437	ENSMUSP00000126757	TRANSLATION	protein_coding	start	-	5	658	0	11.076	0	577.1	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000002718	Cse1l	ENSMUST00000166871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002718	Cse1l	ENSMUST00000168599	ENSMUSP00000129983	TRANSLATION	protein_coding	-	-	5	915	0	16.671	1.2	1080.7	0	-4,-5	-	-	3.884	MINOR
ENSMUSG00000002718	Cse1l	ENSMUST00000169290	ENSMUSP00000128376	TRANSLATION	nonsense_mediated_decay	-	-	1	415	0	8.3	0	371.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053287	Olfr1013	ENSMUST00000065626	ENSMUSP00000068173	TRANSLATION	protein_coding	-	CCDS16218.1	-	305	0	0.28	6.4	166.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053287	Olfr1013	ENSMUST00000216397	ENSMUSP00000150201	TRANSLATION	protein_coding	-	CCDS16218.1	2	305	0	0.28	6.4	166.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075376	Rc3h2	ENSMUST00000124218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075376	Rc3h2	ENSMUST00000205124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075376	Rc3h2	ENSMUST00000100143	ENSMUSP00000097721	TRANSLATION	protein_coding	-	CCDS38116.1	5	1187	11	8.423	7.5	56.4	0	-4,-6	-	-	20.73	PRINCIPAL:3
ENSMUSG00000075376	Rc3h2	ENSMUST00000125619	ENSMUSP00000145082	TRANSLATION	nonsense_mediated_decay	-	-	5	478	11	8.558	0	56.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000075376	Rc3h2	ENSMUST00000112936	ENSMUSP00000108558	TRANSLATION	protein_coding	-	CCDS38116.1	5	1187	11	8.423	7.5	56.4	0	-4,-6	-	-	20.73	PRINCIPAL:3
ENSMUSG00000075376	Rc3h2	ENSMUST00000204962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075376	Rc3h2	ENSMUST00000112934	ENSMUSP00000108556	TRANSLATION	protein_coding	-	CCDS71046.1	1	1125	11	8.423	7.5	56.4	0	-4,-6	-	-	20.73	ALTERNATIVE:1
ENSMUSG00000075376	Rc3h2	ENSMUST00000143826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075376	Rc3h2	ENSMUST00000204690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075376	Rc3h2	ENSMUST00000204959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040310	Alx4	ENSMUST00000111254	ENSMUSP00000106885	TRANSLATION	protein_coding	-	-	1	325	0	2	0	87	0	-4,-5	-	-	9.744	MINOR
ENSMUSG00000040310	Alx4	ENSMUST00000042078	ENSMUSP00000047962	TRANSLATION	protein_coding	-	CCDS16455.1	1	399	0	2	2.7	124.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027628	Aar2	ENSMUST00000150212	ENSMUSP00000118090	TRANSLATION	protein_coding	stop	-	2	124	0	0.4	0	111.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027628	Aar2	ENSMUST00000109570	ENSMUSP00000105198	TRANSLATION	protein_coding	-	CCDS16967.1	1	384	0	1.36	9.5	352.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027628	Aar2	ENSMUST00000126250	ENSMUSP00000114728	TRANSLATION	protein_coding	stop	-	3	42	0	0.4	0	24.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027628	Aar2	ENSMUST00000137928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027628	Aar2	ENSMUST00000029158	ENSMUSP00000029158	TRANSLATION	protein_coding	-	CCDS16967.1	1	384	0	1.36	9.5	352.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000115018	Ndor1	ENSMUST00000228627	ENSMUSP00000153819	TRANSLATION	protein_coding,RT	-	-	-	141	2	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027236	Eif3j1	ENSMUST00000142747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027236	Eif3j1	ENSMUST00000028668	ENSMUSP00000028668	TRANSLATION	protein_coding	-	CCDS38219.1	1	261	0	1.95	1.5	214	0	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000027480	Sun5	ENSMUST00000028982	ENSMUSP00000028982	TRANSLATION	protein_coding	-	CCDS38288.1	1	348	0	3.72	0.5	134.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027480	Sun5	ENSMUST00000124414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027480	Sun5	ENSMUST00000129011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027073	Prg2	ENSMUST00000028467	ENSMUSP00000028467	TRANSLATION	protein_coding	-	CCDS16198.1	1	223	0	2.7	0.5	37.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078862	Gm14326	ENSMUST00000178829	ENSMUSP00000137615	TRANSLATION	protein_coding	-	CCDS50833.1	5	554	66	2.05	0.5	427.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078862	Gm14326	ENSMUST00000108928	ENSMUSP00000104556	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	74.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078862	Gm14326	ENSMUST00000108932	ENSMUSP00000104560	TRANSLATION	protein_coding	-	CCDS71210.1	1	69	0	1.45	0.5	74.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078862	Gm14326	ENSMUST00000108930	ENSMUSP00000104558	TRANSLATION	protein_coding	-	CCDS50833.1	2	554	66	2.05	0.5	427.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038685	Rtel1	ENSMUST00000139608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000153112	ENSMUSP00000118810	TRANSLATION	protein_coding	stop	-	3	162	11	1.88	0	51.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038685	Rtel1	ENSMUST00000146273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000126842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000147266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038685	Rtel1	ENSMUST00000133856	ENSMUSP00000120162	TRANSLATION	protein_coding	start	-	3	88	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038685	Rtel1	ENSMUST00000134651	ENSMUSP00000123039	TRANSLATION	protein_coding	start	-	2	97	8	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038685	Rtel1	ENSMUST00000048608	ENSMUSP00000043563	TRANSLATION	protein_coding	-	CCDS50850.1	1	1128	11	10.43	0.5	374.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000038685	Rtel1	ENSMUST00000108815	ENSMUSP00000104443	TRANSLATION	protein_coding	-	CCDS50852.1	1	1164	11	10.43	0.5	374.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000038685	Rtel1	ENSMUST00000125233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000137700	ENSMUSP00000121400	TRANSLATION	protein_coding	start	-	3	101	8	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038685	Rtel1	ENSMUST00000130935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000098971	ENSMUSP00000096571	TRANSLATION	protein_coding	-	CCDS50851.1	1	1170	11	10.43	0.5	374.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000038685	Rtel1	ENSMUST00000124149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038685	Rtel1	ENSMUST00000108814	ENSMUSP00000104442	TRANSLATION	protein_coding	-	CCDS50849.1	1	1203	11	10.43	0.5	374.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000038685	Rtel1	ENSMUST00000144648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000148252	ENSMUSP00000116159	TRANSLATION	protein_coding	start	-	1	992	0	8.53	0	298.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038685	Rtel1	ENSMUST00000139601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000130772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038685	Rtel1	ENSMUST00000054622	ENSMUSP00000053120	TRANSLATION	protein_coding	-	CCDS17208.1	1	1209	11	10.43	0.5	374.6	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000038685	Rtel1	ENSMUST00000184751	ENSMUSP00000138971	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027171	Prrg4	ENSMUST00000126824	ENSMUSP00000121788	TRANSLATION	protein_coding	stop	-	2	145	10	1.7	0	67.7	1	4,-1	-	-	-1	MINOR
ENSMUSG00000027171	Prrg4	ENSMUST00000028593	ENSMUSP00000028593	TRANSLATION	protein_coding	-	CCDS16493.1	1	226	10	1.78	7.6	67.7	1	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000027077	Smtnl1	ENSMUST00000028471	ENSMUSP00000028471	TRANSLATION	protein_coding	-	CCDS16195.1	1	459	0	3	0.5	77.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079169	Gm15130	ENSMUST00000132464	ENSMUSP00000119418	TRANSLATION	protein_coding	start	-	3	206	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000048038	Ccdc187	ENSMUST00000057224	ENSMUSP00000054283	TRANSLATION	protein_coding	-	CCDS50539.1	1	958	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000048038	Ccdc187	ENSMUST00000217256	ENSMUSP00000150719	TRANSLATION	protein_coding	-	-	5	2163	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000048038	Ccdc187	ENSMUST00000227200	ENSMUSP00000153797	TRANSLATION	protein_coding	-	-	-	2202	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000005232	G6pc2	ENSMUST00000112317	ENSMUSP00000107936	TRANSLATION	protein_coding	-	CCDS71066.1	1	154	4	0	4.1	32.2	2	-4,-5	-	-	8.976	MINOR
ENSMUSG00000005232	G6pc2	ENSMUST00000005364	ENSMUSP00000005364	TRANSLATION	protein_coding	-	CCDS16089.1	1	355	6	0	7.3	55.2	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005232	G6pc2	ENSMUST00000151953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005232	G6pc2	ENSMUST00000129288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047250	Ptgs1	ENSMUST00000144319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047250	Ptgs1	ENSMUST00000062069	ENSMUSP00000059977	TRANSLATION	protein_coding	-	CCDS15970.1	1	602	24	9.35	2.7	150.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047250	Ptgs1	ENSMUST00000149930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047250	Ptgs1	ENSMUST00000133777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047250	Ptgs1	ENSMUST00000151351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027298	Tyro3	ENSMUST00000147761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027298	Tyro3	ENSMUST00000137135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027298	Tyro3	ENSMUST00000135726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027298	Tyro3	ENSMUST00000130456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027298	Tyro3	ENSMUST00000148343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027298	Tyro3	ENSMUST00000147636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027298	Tyro3	ENSMUST00000028763	ENSMUSP00000028763	TRANSLATION	protein_coding	-	CCDS16611.1	1	880	20	11.3	1.5	379.3	1	3,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000027298	Tyro3	ENSMUST00000110783	ENSMUSP00000106410	TRANSLATION	protein_coding	-	CCDS71119.1	1	876	20	11.3	0.5	379.3	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027281	Slx4ip	ENSMUST00000028737	ENSMUSP00000028737	TRANSLATION	protein_coding	-	CCDS16796.1	1	343	0	0	0.5	334.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027281	Slx4ip	ENSMUST00000099311	ENSMUSP00000096914	TRANSLATION	protein_coding	-	CCDS16795.1	1	413	0	0	1.5	553.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027281	Slx4ip	ENSMUST00000135260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027281	Slx4ip	ENSMUST00000141463	ENSMUSP00000117485	TRANSLATION	protein_coding	stop	-	5	55	0	0	0	60.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027281	Slx4ip	ENSMUST00000180277	ENSMUSP00000136131	TRANSLATION	protein_coding	-	CCDS16795.1	3	413	0	0	1.5	553.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027281	Slx4ip	ENSMUST00000130856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039725	Trp53rka	ENSMUST00000125497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039725	Trp53rka	ENSMUST00000039007	ENSMUSP00000045141	TRANSLATION	protein_coding	-	CCDS17082.1	1	244	2	1.2	0.5	32.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000017969	Ptgis	ENSMUST00000018113	ENSMUSP00000018113	TRANSLATION	protein_coding	-	CCDS17097.1	1	501	25	9.45	0.5	141.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000017969	Ptgis	ENSMUST00000136271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017969	Ptgis	ENSMUST00000088041	ENSMUSP00000085357	TRANSLATION	protein_coding	-	-	1	509	25	8.77	0	123.9	0	4,-1	-	-	15.606	MINOR
ENSMUSG00000083361	Olfr360	ENSMUST00000216706	ENSMUSP00000149581	TRANSLATION	protein_coding	-	CCDS15992.1	5	317	0	0.3	1.5	153.8	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000083361	Olfr360	ENSMUST00000120704	ENSMUSP00000114121	TRANSLATION	protein_coding	-	CCDS15992.1	-	317	0	0.3	1.5	153.8	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079009	Gm14139	ENSMUST00000109926	ENSMUSP00000105552	TRANSLATION	protein_coding	-	-	2	463	52	1.7	0	243.8	0	-4,-5	-	-	11.334	PRINCIPAL:1
ENSMUSG00000079009	Gm14139	ENSMUST00000109929	ENSMUSP00000105555	TRANSLATION	protein_coding	start	-	5	494	52	2.7	0.5	317.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037740	Mrps26	ENSMUST00000145614	ENSMUSP00000123324	TRANSLATION	protein_coding	-	CCDS16744.1	1	200	0	4	1.5	186.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000037740	Mrps26	ENSMUST00000046149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027198	Ext2	ENSMUST00000152344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027198	Ext2	ENSMUST00000132429	ENSMUSP00000123492	TRANSLATION	protein_coding	start	-	2	100	6	1.714	0	127.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000139321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027198	Ext2	ENSMUST00000145838	ENSMUSP00000122144	TRANSLATION	protein_coding	stop	-	5	213	0	0	0	53.7	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000125407	ENSMUSP00000120291	TRANSLATION	nonsense_mediated_decay	-	-	5	407	0	0	0	195	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000111248	ENSMUSP00000106879	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000157046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027198	Ext2	ENSMUST00000144780	ENSMUSP00000119281	TRANSLATION	protein_coding	start	-	3	20	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000028623	ENSMUSP00000028623	TRANSLATION	protein_coding	-	CCDS16456.1	1	718	17	4.634	14.8	524.9	4	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000027198	Ext2	ENSMUST00000184931	ENSMUSP00000138956	TRANSLATION	protein_coding	-	-	1	586	10	1.36	0	295.7	4	-4,-2	-	-	1.332	MINOR
ENSMUSG00000027198	Ext2	ENSMUST00000125027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027198	Ext2	ENSMUST00000123649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027580	Helz2	ENSMUST00000121484	ENSMUSP00000112917	TRANSLATION	protein_coding	-	-	5	2903	22	4.4	0	631.6	0	-4,-2	-	-	10.422	MINOR
ENSMUSG00000027580	Helz2	ENSMUST00000108831	ENSMUSP00000104459	TRANSLATION	protein_coding	-	CCDS38380.1	5	2947	28	5.2	0.5	664.5	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000027580	Helz2	ENSMUST00000094203	ENSMUSP00000091756	TRANSLATION	protein_coding	-	-	5	2970	28	5.2	0.5	664.5	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000027580	Helz2	ENSMUST00000149417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027580	Helz2	ENSMUST00000155049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078923	Ube2v1	ENSMUST00000140216	ENSMUSP00000116578	TRANSLATION	protein_coding	stop	-	3	124	0	2.2	0	47.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078923	Ube2v1	ENSMUST00000151365	ENSMUSP00000114764	TRANSLATION	protein_coding	-	CCDS79868.1	2	173	0	3.12	0.5	62.2	0	-4,-6	-	-	11.712	MINOR
ENSMUSG00000078923	Ube2v1	ENSMUST00000144628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078923	Ube2v1	ENSMUST00000060645	ENSMUSP00000053109	TRANSLATION	protein_coding	-	CCDS79869.1	1	105	0	2.264	3	0	0	-4,-6	-	-	4.434	MINOR
ENSMUSG00000078923	Ube2v1	ENSMUST00000130284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078923	Ube2v1	ENSMUST00000144830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078923	Ube2v1	ENSMUST00000109207	ENSMUSP00000104830	TRANSLATION	protein_coding	-	CCDS17103.1	1	147	0	3.264	19.5	62.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000040434	Large2	ENSMUST00000146311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000176774	ENSMUSP00000135400	TRANSLATION	protein_coding	-	CCDS71104.1	5	691	3	2.116	1.5	256.6	0	1,-4	-	-	15	ALTERNATIVE:2
ENSMUSG00000040434	Large2	ENSMUST00000177273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000176402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000130283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000176339	ENSMUSP00000135619	TRANSLATION	protein_coding	stop	-	5	133	0	0.396	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040434	Large2	ENSMUST00000148352	ENSMUSP00000135451	TRANSLATION	nonsense_mediated_decay	-	-	2	92	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000040434	Large2	ENSMUST00000176820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040434	Large2	ENSMUST00000176646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000124428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000176289	ENSMUSP00000135118	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000040434	Large2	ENSMUST00000068586	ENSMUSP00000064128	TRANSLATION	protein_coding	-	CCDS16443.2	1	690	3	2.116	1.5	256.6	0	1,-4	-	-	15	PRINCIPAL:3
ENSMUSG00000040434	Large2	ENSMUST00000176810	ENSMUSP00000135024	TRANSLATION	protein_coding	-	-	5	715	3	2.116	1.5	256.6	0	1,-4	-	-	15	ALTERNATIVE:2
ENSMUSG00000040434	Large2	ENSMUST00000090582	ENSMUSP00000088070	TRANSLATION	protein_coding	-	CCDS50646.1	1	655	3	1.876	1.5	192.1	0	1,-4	-	-	10.452	MINOR
ENSMUSG00000040434	Large2	ENSMUST00000175851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040434	Large2	ENSMUST00000111284	ENSMUSP00000106915	TRANSLATION	protein_coding	-	-	5	715	3	2.116	1.5	256.6	0	1,-4	-	-	15	ALTERNATIVE:2
ENSMUSG00000040434	Large2	ENSMUST00000175740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016256	Ctsz	ENSMUST00000016400	ENSMUSP00000016400	TRANSLATION	protein_coding	-	CCDS17152.1	1	306	4	5.8	2.7	170.6	0	4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000035576	L3mbtl1	ENSMUST00000124264	ENSMUSP00000116118	TRANSLATION	protein_coding	stop	-	1	144	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035576	L3mbtl1	ENSMUST00000153416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035576	L3mbtl1	ENSMUST00000035751	ENSMUSP00000044038	TRANSLATION	protein_coding	-	CCDS38314.1	5	826	0	11.35	0.5	401.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035576	L3mbtl1	ENSMUST00000137108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035576	L3mbtl1	ENSMUST00000149447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035576	L3mbtl1	ENSMUST00000156954	ENSMUSP00000123217	TRANSLATION	protein_coding	stop	-	5	244	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035576	L3mbtl1	ENSMUST00000125296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075133	Olfr1170	ENSMUST00000214386	ENSMUSP00000150142	TRANSLATION	protein_coding	-	CCDS16329.1	5	316	0	0.2	2.7	167.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075133	Olfr1170	ENSMUST00000099831	ENSMUSP00000097419	TRANSLATION	protein_coding	-	CCDS16329.1	-	316	0	0.2	2.7	167.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000064084	Olfr1202	ENSMUST00000072057	ENSMUSP00000071935	TRANSLATION	protein_coding	-	CCDS16350.1	-	309	0	0.36	7.5	158.6	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000064084	Olfr1202	ENSMUST00000217059	ENSMUSP00000150743	TRANSLATION	protein_coding	-	CCDS16350.1	3	309	0	0.36	7.5	158.6	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000064084	Olfr1202	ENSMUST00000214703	ENSMUSP00000151210	TRANSLATION	protein_coding	-	CCDS16350.1	5	309	0	0.36	7.5	158.6	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000100016	Olfr1215	ENSMUST00000216271	ENSMUSP00000150030	TRANSLATION	protein_coding	-	CCDS16360.1	3	312	0	0.2	2.7	160.4	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000100016	Olfr1215	ENSMUST00000188399	ENSMUSP00000141134	TRANSLATION	protein_coding	-	CCDS16360.1	-	312	0	0.2	2.7	160.4	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000100016	Olfr1215	ENSMUST00000214809	ENSMUSP00000151104	TRANSLATION	protein_coding	-	CCDS16360.1	5	312	0	0.2	2.7	160.4	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070857	Olfr1113	ENSMUST00000079966	ENSMUSP00000078883	TRANSLATION	protein_coding	-	CCDS16285.1	-	326	0	0.36	2.7	178.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070857	Olfr1113	ENSMUST00000215611	ENSMUSP00000150991	TRANSLATION	protein_coding	-	CCDS16285.1	5	326	0	0.36	2.7	178.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009614	Sardh	ENSMUST00000129975	ENSMUSP00000120170	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000009614	Sardh	ENSMUST00000147089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009614	Sardh	ENSMUST00000149733	ENSMUSP00000120478	TRANSLATION	protein_coding	stop	-	3	203	15	2.35	0	85	0	-4,0	-	-	-1	MINOR
ENSMUSG00000009614	Sardh	ENSMUST00000091224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009614	Sardh	ENSMUST00000139312	ENSMUSP00000119866	TRANSLATION	protein_coding	stop	-	3	197	15	2.35	0	83.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000009614	Sardh	ENSMUST00000102886	ENSMUSP00000099950	TRANSLATION	protein_coding	-	CCDS15826.1	1	919	32	14.624	1.5	528.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000009614	Sardh	ENSMUST00000127805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009614	Sardh	ENSMUST00000156434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009614	Sardh	ENSMUST00000142136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009614	Sardh	ENSMUST00000144448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074628	Tldc2	ENSMUST00000099140	ENSMUSP00000096743	TRANSLATION	protein_coding	-	-	5	198	0	3.95	0	126.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074628	Tldc2	ENSMUST00000166140	ENSMUSP00000129278	TRANSLATION	protein_coding	-	CCDS50782.1	5	212	0	3.95	1.5	126.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027163	Commd9	ENSMUST00000028584	ENSMUSP00000028584	TRANSLATION	protein_coding	-	CCDS16465.1	1	198	0	3	7.5	86.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027163	Commd9	ENSMUST00000133576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027163	Commd9	ENSMUST00000131287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027163	Commd9	ENSMUST00000156799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040061	Plcb2	ENSMUST00000006415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040061	Plcb2	ENSMUST00000127248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040061	Plcb2	ENSMUST00000129153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040061	Plcb2	ENSMUST00000102524	ENSMUSP00000099583	TRANSLATION	protein_coding	-	CCDS16582.1	2	1181	10	25.15	0.5	628.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040061	Plcb2	ENSMUST00000126907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040061	Plcb2	ENSMUST00000159756	ENSMUSP00000124364	TRANSLATION	protein_coding	-	CCDS71117.1	1	1158	10	24.4	0.5	628.7	0	-4,-6	-	-	16.5	MINOR
ENSMUSG00000015085	Entpd2	ENSMUST00000140590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015085	Entpd2	ENSMUST00000148859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015085	Entpd2	ENSMUST00000028328	ENSMUSP00000028328	TRANSLATION	protein_coding	-	CCDS15770.1	1	495	7	8.8	5.1	338.7	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000035778	Ggta1	ENSMUST00000131745	ENSMUSP00000115112	TRANSLATION	protein_coding	stop	-	5	141	1	1.8	0	97.4	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000035778	Ggta1	ENSMUST00000130913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035778	Ggta1	ENSMUST00000113002	ENSMUSP00000108626	TRANSLATION	protein_coding	-	CCDS50576.1	1	394	22	2.8	0.5	540.8	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000035778	Ggta1	ENSMUST00000164889	ENSMUSP00000132408	TRANSLATION	protein_coding	-	CCDS50576.1	5	394	22	2.8	0.5	540.8	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000035778	Ggta1	ENSMUST00000102794	ENSMUSP00000099858	TRANSLATION	protein_coding	-	CCDS15964.2	1	406	22	2.8	0.5	540.8	2	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000035778	Ggta1	ENSMUST00000149442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035778	Ggta1	ENSMUST00000044255	ENSMUSP00000049408	TRANSLATION	protein_coding	-	CCDS15964.2	5	406	22	2.8	0.5	540.8	2	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000035778	Ggta1	ENSMUST00000079424	ENSMUSP00000078393	TRANSLATION	protein_coding	-	CCDS79786.1	5	372	22	2.8	1.5	535.6	2	-4,-2	-	-	17.688	ALTERNATIVE:2
ENSMUSG00000035778	Ggta1	ENSMUST00000113001	ENSMUSP00000108625	TRANSLATION	protein_coding	-	CCDS79787.1	1	384	22	2.8	0.5	535.6	2	-4,-2	-	-	17.688	ALTERNATIVE:2
ENSMUSG00000075081	Olfr1247	ENSMUST00000111532	ENSMUSP00000107157	TRANSLATION	protein_coding	-	CCDS16386.1	5	314	0	0.28	2.7	162.5	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075081	Olfr1247	ENSMUST00000099771	ENSMUSP00000097359	TRANSLATION	protein_coding	-	CCDS16386.1	-	314	0	0.28	2.7	162.5	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075081	Olfr1247	ENSMUST00000216424	ENSMUSP00000149408	TRANSLATION	protein_coding	-	CCDS16386.1	5	314	0	0.28	2.7	162.5	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061798	Olfr1204	ENSMUST00000213283	ENSMUSP00000150111	TRANSLATION	protein_coding	-	CCDS16352.1	5	309	0	0.28	6.4	164.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000061798	Olfr1204	ENSMUST00000078631	ENSMUSP00000077701	TRANSLATION	protein_coding	-	CCDS16352.1	-	309	0	0.28	6.4	164.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000023094	Msrb2	ENSMUST00000153289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023094	Msrb2	ENSMUST00000137812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023094	Msrb2	ENSMUST00000023856	ENSMUSP00000023856	TRANSLATION	protein_coding	-	CCDS15714.1	1	175	8	3.75	1.5	169.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000023094	Msrb2	ENSMUST00000126894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027314	Dll4	ENSMUST00000102517	ENSMUSP00000099575	TRANSLATION	protein_coding	-	CCDS16600.1	1	686	21	7.1	1.5	279.5	0	2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027314	Dll4	ENSMUST00000127102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032698	Lmo2	ENSMUST00000123437	ENSMUSP00000117703	TRANSLATION	protein_coding	stop	-	2	158	16	3.75	15	104.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032698	Lmo2	ENSMUST00000111139	ENSMUSP00000106769	TRANSLATION	protein_coding	-	-	5	156	8	2	0	57.4	0	-4,-7	-	-	6.324	MINOR
ENSMUSG00000032698	Lmo2	ENSMUST00000111143	ENSMUSP00000106773	TRANSLATION	protein_coding	-	CCDS50651.1	1	220	16	3.75	1.5	104.8	0	-4,-6	-	-	18.144	MINOR
ENSMUSG00000032698	Lmo2	ENSMUST00000133210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032698	Lmo2	ENSMUST00000111140	ENSMUSP00000106770	TRANSLATION	protein_coding	-	CCDS16482.2	1	228	16	3.75	0.5	104.8	0	-4,-7	-	-	18	MINOR
ENSMUSG00000032698	Lmo2	ENSMUST00000138815	ENSMUSP00000121927	TRANSLATION	protein_coding	stop	-	3	59	4	1.5	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032698	Lmo2	ENSMUST00000170926	ENSMUSP00000128317	TRANSLATION	protein_coding	-	CCDS50652.1	2	158	16	3.75	15	104.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032698	Lmo2	ENSMUST00000156813	ENSMUSP00000122369	TRANSLATION	protein_coding	stop	-	2	144	15	3.25	0	97.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000110804	Olfr1084	ENSMUST00000216851	ENSMUSP00000150546	TRANSLATION	protein_coding	-	CCDS38173.1	-	313	0	0.24	7.5	160.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000039155	Cdh26	ENSMUST00000176869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039155	Cdh26	ENSMUST00000042092	ENSMUSP00000048829	TRANSLATION	protein_coding	-	CCDS17162.1	1	763	42	7.84	1.5	142.4	1	2,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000039155	Cdh26	ENSMUST00000108912	ENSMUSP00000104540	TRANSLATION	protein_coding	-	CCDS71211.1	1	744	42	7.84	0.5	142.4	1	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000060703	Cd302	ENSMUST00000028356	ENSMUSP00000028356	TRANSLATION	protein_coding	-	CCDS16058.1	1	219	4	3	0.5	42.6	1	3,-2	-	-	15.604	PRINCIPAL:3
ENSMUSG00000060703	Cd302	ENSMUST00000074606	ENSMUSP00000074188	TRANSLATION	protein_coding	-	CCDS71058.1	1	228	4	3.198	1.5	42.6	1	3,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000000827	Tpd52l2	ENSMUST00000141825	ENSMUSP00000123627	TRANSLATION	protein_coding	start/stop	-	5	161	0	0	0	182.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000130261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000827	Tpd52l2	ENSMUST00000108799	ENSMUSP00000104427	TRANSLATION	protein_coding	-	-	5	229	0	0	7.6	121.4	0	-4,-5	-	-	3	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000149163	ENSMUSP00000117690	TRANSLATION	protein_coding	-	CCDS17214.1	1	220	0	0	6.4	121.4	0	-4,-5	-	-	2.454	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000184588	ENSMUSP00000139238	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000155589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000827	Tpd52l2	ENSMUST00000069712	ENSMUSP00000068888	TRANSLATION	protein_coding	-	CCDS71220.1	1	200	0	0	6.4	226	0	-4,-5	-	-	8.028	PRINCIPAL:4
ENSMUSG00000000827	Tpd52l2	ENSMUST00000129390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000827	Tpd52l2	ENSMUST00000183956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000827	Tpd52l2	ENSMUST00000184849	ENSMUSP00000138837	TRANSLATION	protein_coding	stop	-	3	169	0	0	0	121.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000000844	ENSMUSP00000000844	TRANSLATION	protein_coding	-	CCDS71219.1	1	206	0	0	7.6	122.1	0	-4,-5	-	-	3	MINOR
ENSMUSG00000000827	Tpd52l2	ENSMUST00000108800	ENSMUSP00000104428	TRANSLATION	protein_coding	-	CCDS71221.1	1	186	0	0	7.6	233.1	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000027582	Zgpat	ENSMUST00000131284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027582	Zgpat	ENSMUST00000108807	ENSMUSP00000104435	TRANSLATION	protein_coding	-	CCDS17210.1	1	511	4	2.8	1.5	45.3	0	-4,-5	-	-	15.958	PRINCIPAL:1
ENSMUSG00000027582	Zgpat	ENSMUST00000156258	ENSMUSP00000122714	TRANSLATION	protein_coding	start	-	3	185	0	0	0	45.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027582	Zgpat	ENSMUST00000116366	ENSMUSP00000112067	TRANSLATION	nonsense_mediated_decay	-	-	2	511	4	2.8	1.5	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027582	Zgpat	ENSMUST00000151457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027582	Zgpat	ENSMUST00000029105	ENSMUSP00000029105	TRANSLATION	protein_coding	-	CCDS17210.1	1	511	4	2.8	1.5	45.3	0	-4,-5	-	-	15.958	PRINCIPAL:1
ENSMUSG00000026840	Lamc3	ENSMUST00000028187	ENSMUSP00000028187	TRANSLATION	protein_coding	-	CCDS15903.1	1	1581	6	11.3	0.5	688.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026840	Lamc3	ENSMUST00000135995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026840	Lamc3	ENSMUST00000138325	ENSMUSP00000118745	TRANSLATION	protein_coding	stop	-	1	1537	6	10.5	0	688.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000026786	Apbb1ip	ENSMUST00000148315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026786	Apbb1ip	ENSMUST00000132993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026786	Apbb1ip	ENSMUST00000014290	ENSMUSP00000014290	TRANSLATION	protein_coding	-	CCDS38056.1	1	670	0	8.85	0.5	101.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026786	Apbb1ip	ENSMUST00000131195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014867	Surf4	ENSMUST00000154651	ENSMUSP00000125327	TRANSLATION	protein_coding	start/stop	-	5	124	0	0	0	138.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000014867	Surf4	ENSMUST00000153641	ENSMUSP00000124720	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0	0	106	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014867	Surf4	ENSMUST00000015011	ENSMUSP00000015011	TRANSLATION	protein_coding	-	CCDS15817.1	1	269	0	0	18.3	428.6	7	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000042670	Immp1l	ENSMUST00000037499	ENSMUSP00000049044	TRANSLATION	protein_coding	-	CCDS38192.1	1	166	0	2.85	9.5	0	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026837	Col5a1	ENSMUST00000028280	ENSMUSP00000028280	TRANSLATION	protein_coding	-	CCDS15831.1	1	1838	5	27.5	1.5	448.8	0	3,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000026837	Col5a1	ENSMUST00000238851	ENSMUSP00000159095	TRANSLATION	protein_coding	start	-	-	289	5	3.67	0	325.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026837	Col5a1	ENSMUST00000145423	ENSMUSP00000123532	TRANSLATION	protein_coding	start/stop	-	5	349	5	5.35	0	361.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027230	Creb3l1	ENSMUST00000028663	ENSMUSP00000028663	TRANSLATION	protein_coding	-	CCDS38181.1	1	520	0	0.75	7.5	55.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000056941	Commd7	ENSMUST00000147822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056941	Commd7	ENSMUST00000109782	ENSMUSP00000105404	TRANSLATION	protein_coding	-	CCDS57187.1	1	129	0	0	0.5	66.3	0	-4,-6	-	-	6	MINOR
ENSMUSG00000056941	Commd7	ENSMUST00000071852	ENSMUSP00000071752	TRANSLATION	protein_coding	-	CCDS16912.2	1	200	0	0	12.8	66.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000033526	Ppip5k1	ENSMUST00000110626	ENSMUSP00000106256	TRANSLATION	protein_coding	-	CCDS16639.1	5	1436	24	8.75	0.5	443.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000033526	Ppip5k1	ENSMUST00000134644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000132114	ENSMUSP00000117948	TRANSLATION	protein_coding	start/stop	-	3	271	0	0	0	97.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000110628	ENSMUSP00000106258	TRANSLATION	protein_coding	-	-	5	1416	24	8.75	0	409.4	0	-4,-5	-	-	15.936	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000150081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000131661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000127255	ENSMUSP00000118597	TRANSLATION	protein_coding	start/stop	-	5	283	0	0	0	35.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000052029	ENSMUSP00000057632	TRANSLATION	protein_coding	-	CCDS16639.1	1	1436	24	8.75	0.5	443.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000033526	Ppip5k1	ENSMUST00000132613	ENSMUSP00000119577	TRANSLATION	protein_coding	start/stop	-	5	198	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000155568	ENSMUSP00000116335	TRANSLATION	protein_coding	start/stop	-	5	257	0	0	0	95.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000142364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000110627	ENSMUSP00000106257	TRANSLATION	protein_coding	-	-	5	1415	24	8.75	0.5	443.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033526	Ppip5k1	ENSMUST00000132617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000129276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000140764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033526	Ppip5k1	ENSMUST00000134796	ENSMUSP00000122603	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000137087	ENSMUSP00000115051	TRANSLATION	nonsense_mediated_decay	start	-	5	118	14	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033526	Ppip5k1	ENSMUST00000110625	ENSMUSP00000106255	TRANSLATION	protein_coding	-	-	5	1415	24	8.75	0.5	443.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000041777	Cir1	ENSMUST00000136519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041777	Cir1	ENSMUST00000058615	ENSMUSP00000049834	TRANSLATION	protein_coding	-	CCDS16127.1	1	450	4	0	0.5	54.5	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000074749	Kiz	ENSMUST00000099278	ENSMUSP00000096884	TRANSLATION	protein_coding	-	CCDS16832.1	1	695	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074749	Kiz	ENSMUST00000135595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074749	Kiz	ENSMUST00000156232	ENSMUSP00000121952	TRANSLATION	protein_coding	stop	-	5	207	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039648	Kyat1	ENSMUST00000113661	ENSMUSP00000109291	TRANSLATION	protein_coding	-	CCDS15874.1	1	424	19	10.25	4.1	188.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039648	Kyat1	ENSMUST00000149522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039648	Kyat1	ENSMUST00000148555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039648	Kyat1	ENSMUST00000113659	ENSMUSP00000109289	TRANSLATION	protein_coding	-	-	5	374	16	9.25	1.2	140.6	0	-4,-5	-	-	11.213	MINOR
ENSMUSG00000039648	Kyat1	ENSMUST00000113662	ENSMUSP00000109292	TRANSLATION	protein_coding	-	CCDS15874.1	5	424	19	10.25	4.1	188.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039648	Kyat1	ENSMUST00000113663	ENSMUSP00000109293	TRANSLATION	protein_coding	-	CCDS15874.1	1	424	19	10.25	4.1	188.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039648	Kyat1	ENSMUST00000044038	ENSMUSP00000038612	TRANSLATION	protein_coding	-	CCDS15874.1	1	424	19	10.25	4.1	188.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039648	Kyat1	ENSMUST00000113660	ENSMUSP00000109290	TRANSLATION	protein_coding	-	-	5	381	17	9.25	0	140.7	0	-4,-5	-	-	11.82	MINOR
ENSMUSG00000027495	Fam210b	ENSMUST00000028995	ENSMUSP00000028995	TRANSLATION	protein_coding	-	CCDS17128.1	1	190	0	0	6.3	94	0	-1,1	-	-	8	PRINCIPAL:1
ENSMUSG00000076434	Wfdc3	ENSMUST00000130227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076434	Wfdc3	ENSMUST00000103096	ENSMUSP00000099385	TRANSLATION	protein_coding	-	CCDS17053.1	1	130	0	0.6	0.5	69.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000076434	Wfdc3	ENSMUST00000109328	ENSMUSP00000104951	TRANSLATION	protein_coding	-	-	1	48	0	0	0	21.4	0	-4,-5	-	-	1.854	MINOR
ENSMUSG00000035295	Wdr38	ENSMUST00000124062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035295	Wdr38	ENSMUST00000039535	ENSMUSP00000043834	TRANSLATION	nonsense_mediated_decay	-	-	2	303	0	6.62	0.5	181.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035295	Wdr38	ENSMUST00000112872	ENSMUSP00000108493	TRANSLATION	protein_coding	-	CCDS38119.1	1	303	0	6.62	0.5	181.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026728	Vim	ENSMUST00000148248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026728	Vim	ENSMUST00000193675	ENSMUSP00000141494	TRANSLATION	protein_coding	-	-	5	427	0	6.56	1.2	454.5	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000026728	Vim	ENSMUST00000155605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026728	Vim	ENSMUST00000141365	ENSMUSP00000114742	TRANSLATION	protein_coding	stop	-	2	134	0	0.6	0	120.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026728	Vim	ENSMUST00000028062	ENSMUSP00000028062	TRANSLATION	protein_coding	-	CCDS15696.1	1	466	0	6.56	2.7	454.5	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000026728	Vim	ENSMUST00000191615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074649	BC029722	ENSMUST00000124586	ENSMUSP00000145349	TRANSLATION	protein_coding	-	-	1	51	7	0	0	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026896	Ifih1	ENSMUST00000176431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026896	Ifih1	ENSMUST00000028259	ENSMUSP00000028259	TRANSLATION	protein_coding	-	CCDS16068.1	1	1025	13	13.22	0.5	394.7	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000026896	Ifih1	ENSMUST00000175964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026896	Ifih1	ENSMUST00000112459	ENSMUSP00000108078	TRANSLATION	protein_coding	-	CCDS50594.1	1	976	13	13.06	0.5	394.7	0	-4,-6	-	-	17.682	ALTERNATIVE:2
ENSMUSG00000026896	Ifih1	ENSMUST00000176388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070853	Olfr1150-ps1	ENSMUST00000121186	ENSMUSP00000150363	TRANSLATION	protein_coding	-	-	5	316	0	0.42	1.5	176.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074872	Ctxn2	ENSMUST00000238754	ENSMUSP00000158834	TRANSLATION	protein_coding	-	-	-	81	0	0	14.8	138.7	1	-4,-6	-	-	10	ALTERNATIVE:1
ENSMUSG00000074872	Ctxn2	ENSMUST00000099452	ENSMUSP00000097051	TRANSLATION	protein_coding	-	CCDS50692.1	1	82	0	0	14.8	138.7	1	-4,-6	-	-	10	PRINCIPAL:2
ENSMUSG00000074872	Ctxn2	ENSMUST00000238377	ENSMUSP00000158847	TRANSLATION	protein_coding	-	-	-	81	0	0	14.8	138.7	1	-4,-6	-	-	10	ALTERNATIVE:1
ENSMUSG00000050383	Svs3b	ENSMUST00000063132	ENSMUSP00000062011	TRANSLATION	protein_coding	-	CCDS38321.1	1	265	0	0	1.5	26.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000098754	Prn	ENSMUST00000136783	ENSMUSP00000122345	TRANSLATION	protein_coding,RT	-	CCDS71149.1	2	197	0	1	0.5	236.2	0	-1,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000098754	Prn	ENSMUST00000124100	ENSMUSP00000116195	TRANSLATION	protein_coding,RT	-	CCDS71149.1	2	197	0	1	0.5	236.2	0	-1,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000026849	Tor1a	ENSMUST00000028200	ENSMUSP00000028200	TRANSLATION	protein_coding	-	CCDS15891.1	1	333	11	4.2	4	183.1	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000026849	Tor1a	ENSMUST00000137694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026849	Tor1a	ENSMUST00000123762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026849	Tor1a	ENSMUST00000144152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026849	Tor1a	ENSMUST00000143199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036093	Arl5a	ENSMUST00000036541	ENSMUSP00000041756	TRANSLATION	protein_coding	-	CCDS16033.1	1	179	17	4.5	19.5	220.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000036093	Arl5a	ENSMUST00000130357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027488	Snta1	ENSMUST00000028991	ENSMUSP00000028991	TRANSLATION	protein_coding	-	-	1	503	0	4	1.5	93.6	0	-4,0	-	-	11.76	ALTERNATIVE:2
ENSMUSG00000027488	Snta1	ENSMUST00000133018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027488	Snta1	ENSMUST00000109728	ENSMUSP00000105350	TRANSLATION	protein_coding	-	CCDS50763.1	1	499	0	4	1.5	97.5	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000005089	Slc1a2	ENSMUST00000111213	ENSMUSP00000106844	TRANSLATION	protein_coding	-	-	5	561	13	8.05	1	440.6	7	-4,-7	-	-	18	MINOR
ENSMUSG00000005089	Slc1a2	ENSMUST00000154446	ENSMUSP00000117549	TRANSLATION	protein_coding	start	-	5	145	9	2.3	0	90.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005089	Slc1a2	ENSMUST00000125085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005089	Slc1a2	ENSMUST00000128622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005089	Slc1a2	ENSMUST00000080210	ENSMUSP00000079100	TRANSLATION	protein_coding	-	CCDS38188.1	1	572	13	8.05	7.6	440.6	7	-4,-7	-	-	21	PRINCIPAL:4
ENSMUSG00000005089	Slc1a2	ENSMUST00000136221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005089	Slc1a2	ENSMUST00000005220	ENSMUSP00000005220	TRANSLATION	protein_coding	-	CCDS16469.1	1	558	13	8.05	0.5	440.6	7	-4,-2	-	-	18	MINOR
ENSMUSG00000005089	Slc1a2	ENSMUST00000111212	ENSMUSP00000106843	TRANSLATION	protein_coding	-	CCDS38189.1	1	569	13	8.05	6.3	440.6	7	-4,-2	-	-	20.409	ALTERNATIVE:1
ENSMUSG00000005089	Slc1a2	ENSMUST00000145921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005089	Slc1a2	ENSMUST00000137466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005089	Slc1a2	ENSMUST00000123759	ENSMUSP00000115129	TRANSLATION	protein_coding	stop	-	3	157	0	2	0	94.7	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000005089	Slc1a2	ENSMUST00000136488	ENSMUSP00000122094	TRANSLATION	protein_coding	start/stop	-	5	196	8	2.5	0	174.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000060742	Olfr1076	ENSMUST00000076263	ENSMUSP00000075612	TRANSLATION	protein_coding	-	CCDS16259.1	-	313	0	0.32	6.4	173.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044103	Il1f9	ENSMUST00000057567	ENSMUSP00000053391	TRANSLATION	protein_coding	-	CCDS50518.1	1	193	0	3	0.5	48.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037703	Lzts3	ENSMUST00000110260	ENSMUSP00000105889	TRANSLATION	protein_coding	-	CCDS71145.1	1	586	0	0	0.5	204.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037703	Lzts3	ENSMUST00000045761	ENSMUSP00000037109	TRANSLATION	protein_coding	-	CCDS50714.1	5	700	0	0	2.9	204.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000037703	Lzts3	ENSMUST00000089561	ENSMUSP00000086990	TRANSLATION	protein_coding	-	CCDS50714.1	5	700	0	0	2.9	204.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000027099	Mtx2	ENSMUST00000155844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027099	Mtx2	ENSMUST00000028511	ENSMUSP00000028511	TRANSLATION	protein_coding	-	CCDS16148.1	1	263	10	0	7.5	186.4	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027099	Mtx2	ENSMUST00000129284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026749	Nek6	ENSMUST00000112895	ENSMUSP00000108516	TRANSLATION	protein_coding	-	CCDS16009.1	1	313	21	8.03	7.5	219.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026749	Nek6	ENSMUST00000054234	ENSMUSP00000049723	TRANSLATION	protein_coding	-	CCDS16009.1	1	313	21	8.03	7.5	219.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026749	Nek6	ENSMUST00000151683	ENSMUSP00000120294	TRANSLATION	protein_coding	stop	-	5	41	0	0.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026749	Nek6	ENSMUST00000112902	ENSMUSP00000108523	TRANSLATION	protein_coding	-	-	1	302	21	8.03	0	219.1	0	-4,-7	-	-	18	MINOR
ENSMUSG00000026749	Nek6	ENSMUST00000156726	ENSMUSP00000114376	TRANSLATION	protein_coding	stop	-	5	108	11	2.28	0	45.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026770	Il2ra	ENSMUST00000195427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026770	Il2ra	ENSMUST00000150890	ENSMUSP00000141881	TRANSLATION	protein_coding	-	-	1	44	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000026770	Il2ra	ENSMUST00000028111	ENSMUSP00000028111	TRANSLATION	protein_coding	-	CCDS15685.1	1	268	0	4.05	1.5	18.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000074575	Kcng1	ENSMUST00000099069	ENSMUSP00000096668	TRANSLATION	protein_coding	-	CCDS38344.1	1	514	0	0.96	3.9	228.4	3	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000074575	Kcng1	ENSMUST00000131749	ENSMUSP00000120939	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074575	Kcng1	ENSMUST00000109191	ENSMUSP00000104815	TRANSLATION	protein_coding	-	CCDS38344.1	5	514	0	0.96	3.9	228.4	3	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000150200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000048400	ENSMUSP00000045767	TRANSLATION	protein_coding	-	-	1	1058	0	0	0	214.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000111605	ENSMUSP00000107232	TRANSLATION	protein_coding	-	CCDS38166.1	1	1720	0	0	0.5	214.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000151092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000238769	ENSMUSP00000158595	TRANSLATION	protein_coding	stop	-	-	276	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000139915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000148682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033955	Tnks1bp1	ENSMUST00000126309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009566	Fpgs	ENSMUST00000142186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009566	Fpgs	ENSMUST00000132327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009566	Fpgs	ENSMUST00000127812	ENSMUSP00000116434	TRANSLATION	protein_coding	stop	-	2	243	8	4.88	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009566	Fpgs	ENSMUST00000130164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009566	Fpgs	ENSMUST00000123171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009566	Fpgs	ENSMUST00000146498	ENSMUSP00000141899	TRANSLATION	nonsense_mediated_decay	-	-	5	189	5	1.73	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009566	Fpgs	ENSMUST00000149491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009566	Fpgs	ENSMUST00000143743	ENSMUSP00000141705	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009566	Fpgs	ENSMUST00000156792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009566	Fpgs	ENSMUST00000028148	ENSMUSP00000028148	TRANSLATION	protein_coding	-	CCDS15926.1	1	587	9	6.63	1.5	0	0	1,3	-	-	12	PRINCIPAL:1
ENSMUSG00000075378	Olfr361	ENSMUST00000100145	ENSMUSP00000097723	TRANSLATION	protein_coding	-	CCDS15993.1	-	322	0	0.36	0.5	151	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075378	Olfr361	ENSMUST00000214969	ENSMUSP00000149234	TRANSLATION	protein_coding	-	CCDS15993.1	5	322	0	0.36	0.5	151	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075378	Olfr361	ENSMUST00000216663	ENSMUSP00000149770	TRANSLATION	protein_coding	-	CCDS15993.1	5	322	0	0.36	0.5	151	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038369	Ncoa6	ENSMUST00000043126	ENSMUSP00000045386	TRANSLATION	protein_coding	-	CCDS38295.1	1	2069	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038369	Ncoa6	ENSMUST00000134508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038369	Ncoa6	ENSMUST00000146942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038369	Ncoa6	ENSMUST00000141928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038369	Ncoa6	ENSMUST00000109670	ENSMUSP00000105295	TRANSLATION	protein_coding	-	CCDS38295.1	5	2069	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038369	Ncoa6	ENSMUST00000109669	ENSMUSP00000105294	TRANSLATION	protein_coding	-	-	1	519	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038369	Ncoa6	ENSMUST00000143909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038369	Ncoa6	ENSMUST00000123293	ENSMUSP00000118113	TRANSLATION	protein_coding	stop	-	1	1516	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047363	Cstad	ENSMUST00000102853	ENSMUSP00000099917	TRANSLATION	protein_coding	-	CCDS15884.1	1	104	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000047363	Cstad	ENSMUST00000129719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005233	Spc25	ENSMUST00000149643	ENSMUSP00000117415	TRANSLATION	protein_coding	stop	-	5	167	0	1.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005233	Spc25	ENSMUST00000127243	ENSMUSP00000120142	TRANSLATION	protein_coding	start	-	1	211	0	3.4	0	74.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005233	Spc25	ENSMUST00000112320	ENSMUSP00000107939	TRANSLATION	protein_coding	-	CCDS57174.1	1	226	0	3.4	1.5	74.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000005233	Spc25	ENSMUST00000149045	ENSMUSP00000120999	TRANSLATION	protein_coding	stop	-	3	133	0	2.4	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005233	Spc25	ENSMUST00000167875	ENSMUSP00000128039	TRANSLATION	protein_coding	-	CCDS16088.1	1	178	0	3.4	0.5	74.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000005233	Spc25	ENSMUST00000150505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005233	Spc25	ENSMUST00000005365	ENSMUSP00000005365	TRANSLATION	protein_coding	-	CCDS57174.1	1	226	0	3.4	1.5	74.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000005233	Spc25	ENSMUST00000149401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005233	Spc25	ENSMUST00000126638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016458	Wt1	ENSMUST00000111098	ENSMUSP00000106727	TRANSLATION	protein_coding	-	-	5	288	16	4	4.6	350.9	0	-4,-5	-	-	13	ALTERNATIVE:1
ENSMUSG00000016458	Wt1	ENSMUST00000133470	ENSMUSP00000120054	TRANSLATION	protein_coding	stop	-	5	406	13	3.25	0	567.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016458	Wt1	ENSMUST00000143043	ENSMUSP00000117891	TRANSLATION	protein_coding	start	-	1	517	16	4	0.5	534.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016458	Wt1	ENSMUST00000111099	ENSMUSP00000106728	TRANSLATION	protein_coding	-	-	5	302	16	4	4.6	333.8	0	-4,-5	-	-	13	PRINCIPAL:5
ENSMUSG00000016458	Wt1	ENSMUST00000153944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016458	Wt1	ENSMUST00000145107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016458	Wt1	ENSMUST00000146842	ENSMUSP00000120702	TRANSLATION	protein_coding	stop	-	5	406	16	4	0	398.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016458	Wt1	ENSMUST00000139585	ENSMUSP00000123592	TRANSLATION	protein_coding	start	-	5	360	16	4	0	485.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051379	Flrt3	ENSMUST00000110057	ENSMUSP00000105684	TRANSLATION	protein_coding	-	CCDS16806.1	1	649	0	1	14.8	76.9	1	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000051379	Flrt3	ENSMUST00000172544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051379	Flrt3	ENSMUST00000056760	ENSMUSP00000053399	TRANSLATION	protein_coding	-	CCDS16806.1	1	649	0	1	14.8	76.9	1	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000044033	Ccdc141	ENSMUST00000154013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044033	Ccdc141	ENSMUST00000179868	ENSMUSP00000136620	TRANSLATION	protein_coding	start	-	5	157	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044033	Ccdc141	ENSMUST00000049544	ENSMUSP00000052945	TRANSLATION	protein_coding	-	-	1	1451	0	0.16	0	0	0	-4,-6	-	-	1.002	MINOR
ENSMUSG00000044033	Ccdc141	ENSMUST00000028406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044033	Ccdc141	ENSMUST00000133503	ENSMUSP00000120312	TRANSLATION	nonsense_mediated_decay	-	-	2	78	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044033	Ccdc141	ENSMUST00000175840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044033	Ccdc141	ENSMUST00000111833	ENSMUSP00000107464	TRANSLATION	protein_coding	-	-	2	117	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000044033	Ccdc141	ENSMUST00000179467	ENSMUSP00000136847	TRANSLATION	protein_coding	start/stop	-	3	154	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044033	Ccdc141	ENSMUST00000180261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044033	Ccdc141	ENSMUST00000131660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044033	Ccdc141	ENSMUST00000164114	ENSMUSP00000128736	TRANSLATION	protein_coding	-	CCDS38155.2	5	1531	0	0.96	1.5	68.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027332	Ivd	ENSMUST00000154104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027332	Ivd	ENSMUST00000141836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027332	Ivd	ENSMUST00000125766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027332	Ivd	ENSMUST00000028807	ENSMUSP00000028807	TRANSLATION	protein_coding	-	CCDS16586.1	1	424	29	10.8	2.8	356.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000027332	Ivd	ENSMUST00000140282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027332	Ivd	ENSMUST00000152191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027332	Ivd	ENSMUST00000150162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027332	Ivd	ENSMUST00000126082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027229	Terb2	ENSMUST00000149861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027229	Terb2	ENSMUST00000028661	ENSMUSP00000028661	TRANSLATION	protein_coding	-	CCDS50688.1	1	218	0	0	1.5	290.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027078	Ube2l6	ENSMUST00000154709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027078	Ube2l6	ENSMUST00000159150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027078	Ube2l6	ENSMUST00000102642	ENSMUSP00000099702	TRANSLATION	protein_coding	-	CCDS16194.2	1	153	0	3.83	7.5	124.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027078	Ube2l6	ENSMUST00000150325	ENSMUSP00000119507	TRANSLATION	protein_coding	stop	-	3	89	0	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074596	Spint3	ENSMUST00000099097	ENSMUSP00000096695	TRANSLATION	protein_coding	-	CCDS50794.1	1	88	0	1.3	1.5	71.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000083706	Olfr1118	ENSMUST00000121296	ENSMUSP00000144143	TRANSLATION	protein_coding	-	CCDS38175.1	-	307	0	0.28	1.5	179	7	-2,-5	-	-	11.712	PRINCIPAL:2
ENSMUSG00000083706	Olfr1118	ENSMUST00000216396	ENSMUSP00000150394	TRANSLATION	protein_coding	-	-	5	327	0	0.294	0	179	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000026987	Baz2b	ENSMUST00000147476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000151756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000090925	ENSMUSP00000088443	TRANSLATION	protein_coding	-	CCDS16056.1	5	2123	8	2.4	0.5	222	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026987	Baz2b	ENSMUST00000112550	ENSMUSP00000108169	TRANSLATION	protein_coding	-	CCDS16056.1	5	2123	8	2.4	0.5	222	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026987	Baz2b	ENSMUST00000135722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000152639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000134908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000144893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000137480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000129124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000153711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000130637	ENSMUSP00000119690	TRANSLATION	protein_coding	start/stop	-	3	253	6	1.2	0	33.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026987	Baz2b	ENSMUST00000138089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026987	Baz2b	ENSMUST00000153136	ENSMUSP00000118981	TRANSLATION	protein_coding	start/stop	-	3	296	0	0	0	28.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075270	Pde11a	ENSMUST00000124825	ENSMUSP00000117451	TRANSLATION	protein_coding	start	-	1	72	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000075270	Pde11a	ENSMUST00000144892	ENSMUSP00000115662	TRANSLATION	protein_coding	start	-	1	444	6	10.096	0	263.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075270	Pde11a	ENSMUST00000099992	ENSMUSP00000097572	TRANSLATION	protein_coding	-	CCDS38152.1	1	933	17	14.53	2.9	397.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038718	Pbx3	ENSMUST00000138021	ENSMUSP00000135226	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	178.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038718	Pbx3	ENSMUST00000153278	ENSMUSP00000123567	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	0	2	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038718	Pbx3	ENSMUST00000113132	ENSMUSP00000108757	TRANSLATION	protein_coding	-	CCDS71033.1	1	351	0	2	13	382.6	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000038718	Pbx3	ENSMUST00000141653	ENSMUSP00000115710	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	131.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038718	Pbx3	ENSMUST00000155423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038718	Pbx3	ENSMUST00000040638	ENSMUSP00000045281	TRANSLATION	protein_coding	-	CCDS15947.1	1	434	0	2	10.5	382.6	0	-4,-5	-	-	15.168	PRINCIPAL:3
ENSMUSG00000038718	Pbx3	ENSMUST00000175855	ENSMUSP00000135838	TRANSLATION	nonsense_mediated_decay	start	-	5	44	0	0	0	63	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038718	Pbx3	ENSMUST00000143776	ENSMUSP00000119914	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	0	2	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038718	Pbx3	ENSMUST00000176213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038718	Pbx3	ENSMUST00000127353	ENSMUSP00000114695	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	81.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096566	Olfr1306	ENSMUST00000099607	ENSMUSP00000097202	TRANSLATION	protein_coding	-	CCDS16536.1	-	312	0	0.24	8.8	144.1	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096566	Olfr1306	ENSMUST00000214844	ENSMUSP00000151142	TRANSLATION	protein_coding	-	CCDS16536.1	5	312	0	0.24	8.8	144.1	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068947	Olfr366	ENSMUST00000214897	ENSMUSP00000150608	TRANSLATION	protein_coding	-	CCDS15996.1	5	309	0	0.42	2.7	208.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068947	Olfr366	ENSMUST00000091001	ENSMUSP00000088524	TRANSLATION	protein_coding	-	CCDS15996.1	-	309	0	0.42	2.7	208.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019715	Gle1	ENSMUST00000148983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019715	Gle1	ENSMUST00000127390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019715	Gle1	ENSMUST00000149730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019715	Gle1	ENSMUST00000123608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019715	Gle1	ENSMUST00000019859	ENSMUSP00000019859	TRANSLATION	protein_coding	-	CCDS15862.1	1	699	0	1.67	1.5	298.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019715	Gle1	ENSMUST00000154490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019715	Gle1	ENSMUST00000124687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060336	Zfp937	ENSMUST00000073782	ENSMUSP00000073454	TRANSLATION	protein_coding	-	CCDS50738.1	1	503	58	2.2	0.5	355.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037514	Pank2	ENSMUST00000131779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037514	Pank2	ENSMUST00000183349	ENSMUSP00000139203	TRANSLATION	nonsense_mediated_decay	start	-	3	131	12	2.08	0	137.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037514	Pank2	ENSMUST00000138509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037514	Pank2	ENSMUST00000183388	ENSMUSP00000139197	TRANSLATION	nonsense_mediated_decay	start	-	1	77	0	2	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037514	Pank2	ENSMUST00000184105	ENSMUSP00000138992	TRANSLATION	nonsense_mediated_decay	-	-	5	154	5	1.83	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037514	Pank2	ENSMUST00000184932	ENSMUSP00000139259	TRANSLATION	nonsense_mediated_decay	-	-	2	156	5	1.83	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037514	Pank2	ENSMUST00000150843	ENSMUSP00000119606	TRANSLATION	protein_coding	-	CCDS16761.1	1	443	32	7.91	1.5	389.3	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037514	Pank2	ENSMUST00000145904	ENSMUSP00000115034	TRANSLATION	protein_coding	start	-	5	183	11	4.83	0	104.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008333	Snrpb2	ENSMUST00000127760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008333	Snrpb2	ENSMUST00000126763	ENSMUSP00000120137	TRANSLATION	protein_coding	stop	-	3	143	0	3.25	0	37.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008333	Snrpb2	ENSMUST00000139114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008333	Snrpb2	ENSMUST00000008477	ENSMUSP00000008477	TRANSLATION	protein_coding	-	CCDS16808.1	1	225	0	5.25	10.8	89.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000008333	Snrpb2	ENSMUST00000134091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063019	Manbal	ENSMUST00000081202	ENSMUSP00000079965	TRANSLATION	protein_coding	-	CCDS38304.1	1	85	0	0	0.5	110.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000042745	Id1	ENSMUST00000109824	ENSMUSP00000105449	TRANSLATION	protein_coding	-	-	-	168	0	0.64	0	48	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042745	Id1	ENSMUST00000038368	ENSMUSP00000092019	TRANSLATION	protein_coding	-	CCDS16897.1	1	148	0	0.64	1.5	48	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000002732	Fkbp7	ENSMUST00000147355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002732	Fkbp7	ENSMUST00000154097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002732	Fkbp7	ENSMUST00000002809	ENSMUSP00000002809	TRANSLATION	protein_coding	-	CCDS16161.1	1	218	9	3.8	3.9	137.2	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000002732	Fkbp7	ENSMUST00000176815	ENSMUSP00000135000	TRANSLATION	nonsense_mediated_decay	-	-	3	123	0	1.8	0	73	0	3,-2	-	-	-1	MINOR
ENSMUSG00000049843	Olfr1102	ENSMUST00000214002	ENSMUSP00000149634	TRANSLATION	protein_coding	-	CCDS16275.1	5	324	0	0	0.5	172	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000049843	Olfr1102	ENSMUST00000055129	ENSMUSP00000052861	TRANSLATION	protein_coding	-	CCDS16275.1	-	324	0	0	0.5	172	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070533	Wfdc8	ENSMUST00000109339	ENSMUSP00000104963	TRANSLATION	protein_coding	-	CCDS71191.1	1	426	0	1.78	0.5	143.4	0	-4,-1	-	-	10.194	MINOR
ENSMUSG00000070533	Wfdc8	ENSMUST00000094351	ENSMUSP00000091911	TRANSLATION	protein_coding	-	CCDS71192.1	1	264	0	1.78	0.5	143.4	0	-4,-1	-	-	10.194	MINOR
ENSMUSG00000070533	Wfdc8	ENSMUST00000109338	ENSMUSP00000104962	TRANSLATION	protein_coding	-	CCDS38324.1	1	273	0	1.78	0.5	173.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000025839	Pramel7	ENSMUST00000148030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025839	Pramel7	ENSMUST00000026957	ENSMUSP00000026957	TRANSLATION	protein_coding	-	CCDS16293.1	1	479	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000025839	Pramel7	ENSMUST00000138293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025839	Pramel7	ENSMUST00000141790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055926	Gm14137	ENSMUST00000239130	ENSMUSP00000159192	TRANSLATION	protein_coding	-	-	-	175	0	0	3.6	0	0	-4,0	-	-	1	ALTERNATIVE:2
ENSMUSG00000055926	Gm14137	ENSMUST00000069711	ENSMUSP00000068999	TRANSLATION	protein_coding	-	CCDS16594.1	-	181	0	0	1.5	0	0	-4,0	-	-	0.192	PRINCIPAL:2
ENSMUSG00000059429	Olfr365	ENSMUST00000218602	ENSMUSP00000151617	TRANSLATION	protein_coding	-	CCDS15995.1	5	312	0	0.3	2.7	195.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059429	Olfr365	ENSMUST00000074168	ENSMUSP00000073801	TRANSLATION	protein_coding	-	CCDS15995.1	-	312	0	0.3	2.7	195.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059429	Olfr365	ENSMUST00000213969	ENSMUSP00000150139	TRANSLATION	protein_coding	-	CCDS15995.1	5	312	0	0.3	2.7	195.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043110	Lrrn4	ENSMUST00000049787	ENSMUSP00000057005	TRANSLATION	protein_coding	-	CCDS16780.1	1	733	0	1.88	1.5	84.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027244	Atg13	ENSMUST00000136412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027244	Atg13	ENSMUST00000076803	ENSMUSP00000076081	TRANSLATION	protein_coding	-	CCDS16438.1	1	479	0	5.5	11.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027244	Atg13	ENSMUST00000028678	ENSMUSP00000028678	TRANSLATION	protein_coding	-	-	5	516	0	5.5	6.5	0	0	-4,-5	-	-	7.572	MINOR
ENSMUSG00000027244	Atg13	ENSMUST00000126000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027244	Atg13	ENSMUST00000139548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027244	Atg13	ENSMUST00000153631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068580	Zfyve19	ENSMUST00000147584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068580	Zfyve19	ENSMUST00000142644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068580	Zfyve19	ENSMUST00000153349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068580	Zfyve19	ENSMUST00000149036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068580	Zfyve19	ENSMUST00000123776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068580	Zfyve19	ENSMUST00000090174	ENSMUSP00000087636	TRANSLATION	protein_coding	-	CCDS16595.1	1	389	18	3.75	0.5	36.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068580	Zfyve19	ENSMUST00000154185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068580	Zfyve19	ENSMUST00000154057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068580	Zfyve19	ENSMUST00000102519	ENSMUSP00000099577	TRANSLATION	protein_coding	-	CCDS50672.1	1	330	9	2	0.5	36.2	0	-4,-5	-	-	8.502	MINOR
ENSMUSG00000068580	Zfyve19	ENSMUST00000141514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068580	Zfyve19	ENSMUST00000123323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027484	Bpifa5	ENSMUST00000028986	ENSMUSP00000028986	TRANSLATION	protein_coding	-	CCDS16926.1	1	270	0	5.015	1.5	121.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047030	Spata2	ENSMUST00000154770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047030	Spata2	ENSMUST00000109211	ENSMUSP00000104834	TRANSLATION	protein_coding	-	-	1	414	2	1.8	0	0	0	-4,-5	-	-	6.666	MINOR
ENSMUSG00000047030	Spata2	ENSMUST00000155875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047030	Spata2	ENSMUST00000057627	ENSMUSP00000057095	TRANSLATION	protein_coding	-	CCDS17100.1	1	515	10	1.8	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047030	Spata2	ENSMUST00000126389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047030	Spata2	ENSMUST00000147051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111179	Olfr996	ENSMUST00000077075	ENSMUSP00000076330	TRANSLATION	protein_coding	-	CCDS16209.1	-	314	0	0.12	1.5	176.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000037254	Itih2	ENSMUST00000155809	ENSMUSP00000124636	TRANSLATION	protein_coding	stop	-	1	452	4	1.36	0	161.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037254	Itih2	ENSMUST00000042290	ENSMUSP00000046530	TRANSLATION	protein_coding	-	CCDS15677.2	1	950	4	1.6	0.5	418.9	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000037254	Itih2	ENSMUST00000161909	ENSMUSP00000124880	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026751	Nr5a1	ENSMUST00000149690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026751	Nr5a1	ENSMUST00000028084	ENSMUSP00000028084	TRANSLATION	protein_coding	-	CCDS16011.1	1	462	8	5.8	6.3	198.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026751	Nr5a1	ENSMUST00000112883	ENSMUSP00000108504	TRANSLATION	protein_coding	-	CCDS16011.1	1	462	8	5.8	6.3	198.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000044249	Defb29	ENSMUST00000060598	ENSMUSP00000052589	TRANSLATION	protein_coding	-	CCDS38276.1	1	78	0	0	1.5	28.7	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000027422	Rrbp1	ENSMUST00000132434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027422	Rrbp1	ENSMUST00000155539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027422	Rrbp1	ENSMUST00000016072	ENSMUSP00000016072	TRANSLATION	protein_coding	-	CCDS38252.1	5	1464	0	0	0.5	96.3	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027422	Rrbp1	ENSMUST00000140511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027422	Rrbp1	ENSMUST00000136068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027422	Rrbp1	ENSMUST00000135367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027422	Rrbp1	ENSMUST00000037875	ENSMUSP00000040560	TRANSLATION	protein_coding	-	CCDS38253.1	1	701	0	0	0.5	96.3	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000027422	Rrbp1	ENSMUST00000154649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090097	Olfr1182	ENSMUST00000126038	ENSMUSP00000148855	TRANSLATION	protein_coding	-	CCDS16336.1	3	305	0	0	1.5	167.5	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000090097	Olfr1182	ENSMUST00000179450	ENSMUSP00000136580	TRANSLATION	protein_coding	-	CCDS16336.1	2	305	0	0	1.5	167.5	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000049044	Rapgef4	ENSMUST00000102698	ENSMUSP00000099759	TRANSLATION	protein_coding	-	CCDS16120.1	1	993	25	25.41	5.3	410.4	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000049044	Rapgef4	ENSMUST00000146970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000028525	ENSMUSP00000028525	TRANSLATION	protein_coding	-	CCDS57177.1	1	867	13	21.66	4.1	354.1	0	-4,-6	-	-	4.064	MINOR
ENSMUSG00000049044	Rapgef4	ENSMUST00000124004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000151236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000153887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000090826	ENSMUSP00000088336	TRANSLATION	protein_coding	-	CCDS57176.1	1	1011	25	25.16	5.1	410.4	0	-4,-5	-	-	19.408	ALTERNATIVE:1
ENSMUSG00000049044	Rapgef4	ENSMUST00000150234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000149421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000122975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049044	Rapgef4	ENSMUST00000156031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007476	Lrrc8a	ENSMUST00000095078	ENSMUSP00000092690	TRANSLATION	protein_coding	-	CCDS15875.1	5	810	0	1	12.8	586.6	4	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000007476	Lrrc8a	ENSMUST00000113654	ENSMUSP00000109284	TRANSLATION	protein_coding	-	CCDS15875.1	5	810	0	1	12.8	586.6	4	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000074595	Wfdc6a	ENSMUST00000099096	ENSMUSP00000096694	TRANSLATION	protein_coding	-	CCDS17042.1	1	136	0	1	0.5	100	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000074595	Wfdc6a	ENSMUST00000109342	ENSMUSP00000104966	TRANSLATION	protein_coding	-	CCDS17042.1	3	136	0	1	0.5	100	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079539	Obp2b	ENSMUST00000114192	ENSMUSP00000109830	TRANSLATION	protein_coding	-	CCDS38080.1	5	176	0	4.32	1.5	103.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096822	Olfr344	ENSMUST00000215879	ENSMUSP00000151202	TRANSLATION	protein_coding	-	CCDS15976.1	5	309	0	0.42	1.5	188.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096822	Olfr344	ENSMUST00000075474	ENSMUSP00000074919	TRANSLATION	protein_coding	-	CCDS15976.1	-	309	0	0.42	1.5	188.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000017868	Sgk2	ENSMUST00000139053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017868	Sgk2	ENSMUST00000018012	ENSMUSP00000018012	TRANSLATION	protein_coding	-	CCDS17004.1	1	367	18	9.1	7.5	251	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000017868	Sgk2	ENSMUST00000117123	ENSMUSP00000112468	TRANSLATION	protein_coding	-	CCDS71184.1	1	338	17	8.35	0.5	201.1	0	-4,-7	-	-	12.84	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000133205	ENSMUSP00000119682	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000103091	ENSMUSP00000099380	TRANSLATION	protein_coding	-	CCDS17075.1	1	720	0	4.5	15	459.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017670	Elmo2	ENSMUST00000137188	ENSMUSP00000123232	TRANSLATION	protein_coding	start/stop	-	3	194	0	0	0	202.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000127496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017670	Elmo2	ENSMUST00000103088	ENSMUSP00000099377	TRANSLATION	protein_coding	-	-	5	798	5	3.5	0	436.3	0	-4,-5	-	-	13.628	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000126318	ENSMUSP00000116124	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000149844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017670	Elmo2	ENSMUST00000074046	ENSMUSP00000073691	TRANSLATION	protein_coding	-	CCDS17076.1	1	732	0	4.5	9.4	453.1	0	-4,-5	-	-	14.034	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000094329	ENSMUSP00000091887	TRANSLATION	protein_coding	-	CCDS17075.1	1	720	0	4.5	15	459.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017670	Elmo2	ENSMUST00000071699	ENSMUSP00000071619	TRANSLATION	protein_coding	-	-	1	798	5	3.5	0	436.3	0	-4,-5	-	-	13.628	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000148643	ENSMUSP00000117124	TRANSLATION	protein_coding	start	-	1	290	0	4.5	0	145.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017670	Elmo2	ENSMUST00000128690	ENSMUSP00000114303	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000114447	ENSMUSP00000110090	TRANSLATION	protein_coding	-	-	5	2328	0	24.542	0.5	1074.3	12	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000004113	Cacna1b	ENSMUST00000131861	ENSMUSP00000141653	TRANSLATION	protein_coding	start	-	5	168	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000133892	ENSMUSP00000115285	TRANSLATION	protein_coding	start/stop	-	3	228	0	1.2	0	63.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000041342	ENSMUSP00000037416	TRANSLATION	protein_coding	-	CCDS38065.1	1	2327	0	24.542	0.5	1074.3	12	-4,-5	-	-	11.904	PRINCIPAL:2
ENSMUSG00000004113	Cacna1b	ENSMUST00000100348	ENSMUSP00000097920	TRANSLATION	protein_coding	-	-	5	2328	0	24.542	0.5	1074.3	12	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000004113	Cacna1b	ENSMUST00000125798	ENSMUSP00000141767	TRANSLATION	nonsense_mediated_decay	start	-	5	114	0	2.2	0	119.6	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000070864	ENSMUSP00000063236	TRANSLATION	protein_coding	-	CCDS15739.1	5	2288	0	23.822	0.5	997.6	11	-4,-5	-	-	5.862	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000102939	ENSMUSP00000100003	TRANSLATION	protein_coding	-	-	5	2325	0	24.542	0.5	1075.9	11	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004113	Cacna1b	ENSMUST00000155356	ENSMUSP00000116674	TRANSLATION	protein_coding	start/stop	-	5	111	0	2.8	0	124.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004113	Cacna1b	ENSMUST00000124183	ENSMUSP00000114605	TRANSLATION	protein_coding	start/stop	-	5	102	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027245	Hypk	ENSMUST00000125849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027245	Hypk	ENSMUST00000110612	ENSMUSP00000106242	TRANSLATION	protein_coding	-	CCDS16647.1	5	129	2	0	2.9	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000027245	Hypk	ENSMUST00000131870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027245	Hypk	ENSMUST00000028677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027245	Hypk	ENSMUST00000126764	ENSMUSP00000117946	TRANSLATION	protein_coding	-	CCDS16647.1	1	129	2	0	2.9	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000081836	Olfr1180	ENSMUST00000217320	ENSMUSP00000150965	TRANSLATION	protein_coding	-	CCDS16334.1	5	309	0	0.2	1.5	159.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000081836	Olfr1180	ENSMUST00000216121	ENSMUSP00000149838	TRANSLATION	protein_coding	-	CCDS16334.1	3	309	0	0.2	1.5	159.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000081836	Olfr1180	ENSMUST00000099824	ENSMUSP00000097412	TRANSLATION	protein_coding	-	CCDS16334.1	-	309	0	0.2	1.5	159.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027472	Pdrg1	ENSMUST00000123083	ENSMUSP00000115986	TRANSLATION	nonsense_mediated_decay	-	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027472	Pdrg1	ENSMUST00000124220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027472	Pdrg1	ENSMUST00000140325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027472	Pdrg1	ENSMUST00000140853	ENSMUSP00000117116	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027472	Pdrg1	ENSMUST00000150545	ENSMUSP00000115545	TRANSLATION	nonsense_mediated_decay	-	-	2	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027472	Pdrg1	ENSMUST00000028972	ENSMUSP00000028972	TRANSLATION	protein_coding	-	CCDS16904.1	1	133	0	0	7.5	32.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027472	Pdrg1	ENSMUST00000152072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027472	Pdrg1	ENSMUST00000151392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068647	Olfr1278	ENSMUST00000090330	ENSMUSP00000087802	TRANSLATION	protein_coding	-	CCDS16518.1	-	313	0	0.42	6.4	147.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068647	Olfr1278	ENSMUST00000215210	ENSMUSP00000149635	TRANSLATION	protein_coding	-	CCDS16518.1	5	313	0	0.42	6.4	147.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068647	Olfr1278	ENSMUST00000216229	ENSMUSP00000150587	TRANSLATION	protein_coding	-	CCDS16518.1	5	313	0	0.42	6.4	147.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068647	Olfr1278	ENSMUST00000213516	ENSMUSP00000150489	TRANSLATION	nonsense_mediated_decay	-	-	5	313	0	0.42	6.4	147.1	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000068647	Olfr1278	ENSMUST00000214669	ENSMUSP00000149106	TRANSLATION	nonsense_mediated_decay	-	-	5	313	0	0.42	6.4	147.1	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000068647	Olfr1278	ENSMUST00000213727	ENSMUSP00000150993	TRANSLATION	protein_coding	-	CCDS16518.1	5	313	0	0.42	6.4	147.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027108	Ola1	ENSMUST00000133228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027108	Ola1	ENSMUST00000100015	ENSMUSP00000097592	TRANSLATION	protein_coding	-	CCDS16125.1	1	270	12	5.75	0.5	82	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000027108	Ola1	ENSMUST00000112055	ENSMUSP00000107686	TRANSLATION	protein_coding	-	-	5	281	15	6.11	0	82	0	-4,-6	-	-	6	MINOR
ENSMUSG00000027108	Ola1	ENSMUST00000136684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027108	Ola1	ENSMUST00000152608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027108	Ola1	ENSMUST00000028517	ENSMUSP00000028517	TRANSLATION	protein_coding	-	CCDS16124.1	1	396	15	9.75	18.3	220.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000006476	Nsmf	ENSMUST00000102931	ENSMUSP00000099995	TRANSLATION	protein_coding	-	CCDS15747.1	5	509	0	0	6.3	0	0	-4,0	-	-	2.445	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000116574	ENSMUSP00000112273	TRANSLATION	protein_coding	-	-	5	509	0	0	6.3	0	0	-4,0	-	-	2.445	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000155909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006476	Nsmf	ENSMUST00000006646	ENSMUSP00000006646	TRANSLATION	protein_coding	-	CCDS15746.1	1	530	0	0	7.5	13.9	0	-4,0	-	-	9	PRINCIPAL:3
ENSMUSG00000006476	Nsmf	ENSMUST00000135328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006476	Nsmf	ENSMUST00000074422	ENSMUSP00000074022	TRANSLATION	protein_coding	-	-	1	507	0	0	6.3	0	0	-4,0	-	-	2.445	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000114388	ENSMUSP00000110030	TRANSLATION	protein_coding	-	CCDS50523.1	1	500	0	0	6.3	13.9	0	-4,0	-	-	8.445	ALTERNATIVE:1
ENSMUSG00000006476	Nsmf	ENSMUST00000132172	ENSMUSP00000116106	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000152122	ENSMUSP00000121580	TRANSLATION	protein_coding	stop	-	5	210	0	0	0	13.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000140733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006476	Nsmf	ENSMUST00000100334	ENSMUSP00000097908	TRANSLATION	protein_coding	-	CCDS15745.1	1	532	0	0	7.5	0	0	-4,0	-	-	3	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000134744	ENSMUSP00000120376	TRANSLATION	protein_coding	start	-	5	282	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000144520	ENSMUSP00000141583	TRANSLATION	nonsense_mediated_decay	-	-	5	328	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000141866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006476	Nsmf	ENSMUST00000124309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006476	Nsmf	ENSMUST00000114386	ENSMUSP00000110028	TRANSLATION	protein_coding	-	-	5	479	0	0	6.3	0	0	-4,0	-	-	2.445	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000140737	ENSMUSP00000141410	TRANSLATION	protein_coding	-	-	5	164	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000006476	Nsmf	ENSMUST00000152506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027204	Fbn1	ENSMUST00000103234	ENSMUSP00000099524	TRANSLATION	protein_coding	-	CCDS16676.1	1	2873	94	32.85	7.5	1813	0	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000027204	Fbn1	ENSMUST00000148272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027204	Fbn1	ENSMUST00000028633	ENSMUSP00000028633	TRANSLATION	protein_coding	-	CCDS16676.1	1	2873	94	32.85	7.5	1813	0	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000052155	Acvr2a	ENSMUST00000156681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052155	Acvr2a	ENSMUST00000063886	ENSMUSP00000067305	TRANSLATION	protein_coding	-	CCDS16021.1	1	513	18	9	17	141.5	0	3,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000026936	Lcn3	ENSMUST00000239498	ENSMUSP00000159300	TRANSLATION	protein_coding	-	-	-	182	0	4.24	0	76.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000026936	Lcn3	ENSMUST00000028304	ENSMUSP00000028304	TRANSLATION	protein_coding	-	CCDS15790.1	1	187	0	4.24	0.5	76.6	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000075063	Olfr142	ENSMUST00000099752	ENSMUSP00000097341	TRANSLATION	protein_coding	-	CCDS16410.1	-	305	0	0.36	7.5	176.2	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075063	Olfr142	ENSMUST00000213968	ENSMUSP00000150216	TRANSLATION	protein_coding	-	CCDS16410.1	5	305	0	0.36	7.5	176.2	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000068966	Zbtb34	ENSMUST00000113158	ENSMUSP00000108783	TRANSLATION	protein_coding	-	CCDS38106.1	3	518	12	0	2.7	158.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068966	Zbtb34	ENSMUST00000091037	ENSMUSP00000088560	TRANSLATION	protein_coding	-	CCDS38106.1	1	518	12	0	2.7	158.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068966	Zbtb34	ENSMUST00000134589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072980	Oip5	ENSMUST00000110805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072980	Oip5	ENSMUST00000123818	ENSMUSP00000115219	TRANSLATION	protein_coding	-	CCDS38205.1	1	241	5	0	0.5	81.7	0	-4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000025838	Pramel6	ENSMUST00000150746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025838	Pramel6	ENSMUST00000132216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025838	Pramel6	ENSMUST00000148582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025838	Pramel6	ENSMUST00000138504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025838	Pramel6	ENSMUST00000026956	ENSMUSP00000026956	TRANSLATION	protein_coding	-	CCDS16294.1	1	485	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000025838	Pramel6	ENSMUST00000111572	ENSMUSP00000107198	TRANSLATION	protein_coding	-	CCDS16294.1	1	485	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026791	Slc2a8	ENSMUST00000123643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026791	Slc2a8	ENSMUST00000191777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026791	Slc2a8	ENSMUST00000193695	ENSMUSP00000142100	TRANSLATION	nonsense_mediated_decay	-	-	1	291	7	4.85	0	194.2	15	-4,-6	-	-	-1	MINOR
ENSMUSG00000026791	Slc2a8	ENSMUST00000153484	ENSMUSP00000141959	TRANSLATION	protein_coding	-	-	1	329	7	4.85	0	194.4	15	-4,-6	-	-	4.002	MINOR
ENSMUSG00000026791	Slc2a8	ENSMUST00000195863	ENSMUSP00000141879	TRANSLATION	protein_coding	stop	-	2	60	4	1.55	0	61.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000026791	Slc2a8	ENSMUST00000194066	ENSMUSP00000141969	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026791	Slc2a8	ENSMUST00000028129	ENSMUSP00000028129	TRANSLATION	protein_coding	-	CCDS15937.1	1	477	10	8.034	6.3	323.9	19	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000026791	Slc2a8	ENSMUST00000130769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026824	Kcnj3	ENSMUST00000112632	ENSMUSP00000108251	TRANSLATION	protein_coding	-	CCDS84524.1	1	235	0	1	5.3	277.3	3	-4,-6	-	-	3.795	MINOR
ENSMUSG00000026824	Kcnj3	ENSMUST00000112633	ENSMUSP00000108252	TRANSLATION	protein_coding	-	CCDS16042.1	1	501	0	2.8	8.8	463.7	3	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026824	Kcnj3	ENSMUST00000067101	ENSMUSP00000063329	TRANSLATION	protein_coding	-	CCDS16042.1	1	501	0	2.8	8.8	463.7	3	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000026814	Eng	ENSMUST00000156306	ENSMUSP00000122186	TRANSLATION	protein_coding	start/stop	-	5	312	0	0	0	39.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026814	Eng	ENSMUST00000192455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026814	Eng	ENSMUST00000113272	ENSMUSP00000108897	TRANSLATION	protein_coding	-	CCDS50569.1	1	641	0	0	0.5	36.6	2	2,-3	-	-	5.574	ALTERNATIVE:2
ENSMUSG00000026814	Eng	ENSMUST00000009705	ENSMUSP00000009705	TRANSLATION	protein_coding	-	CCDS15925.1	1	653	0	0	0.5	36.6	2	2,-3	-	-	5.574	PRINCIPAL:3
ENSMUSG00000026814	Eng	ENSMUST00000139770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026814	Eng	ENSMUST00000167841	ENSMUSP00000130585	TRANSLATION	protein_coding	-	CCDS50570.1	1	652	0	0	0.5	36.6	2	4,-1	-	-	5.574	ALTERNATIVE:2
ENSMUSG00000027219	Slc28a2	ENSMUST00000028652	ENSMUSP00000028652	TRANSLATION	protein_coding	-	CCDS16663.1	1	660	9	6.93	1.5	363.2	12	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027219	Slc28a2	ENSMUST00000110525	ENSMUSP00000106154	TRANSLATION	protein_coding	-	CCDS16663.1	1	660	9	6.93	1.5	363.2	12	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027219	Slc28a2	ENSMUST00000153848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027219	Slc28a2	ENSMUST00000110524	ENSMUSP00000106153	TRANSLATION	protein_coding	-	CCDS16663.1	1	660	9	6.93	1.5	363.2	12	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027219	Slc28a2	ENSMUST00000139850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074997	Pin1rt1	ENSMUST00000099659	ENSMUSP00000139143	TRANSLATION	protein_coding	-	CCDS71110.1	1	159	7	1	15.3	54.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026887	Mrrf	ENSMUST00000132042	ENSMUSP00000123918	TRANSLATION	nonsense_mediated_decay	-	-	3	83	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026887	Mrrf	ENSMUST00000162490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026887	Mrrf	ENSMUST00000200701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026887	Mrrf	ENSMUST00000028250	ENSMUSP00000028250	TRANSLATION	protein_coding	-	CCDS38114.1	1	262	0	3.99	7.5	143.7	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000075101	Olfr1222	ENSMUST00000215816	ENSMUSP00000150144	TRANSLATION	protein_coding	-	CCDS16367.1	5	311	0	0.2	2.7	151.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075101	Olfr1222	ENSMUST00000214027	ENSMUSP00000149001	TRANSLATION	protein_coding	-	CCDS16367.1	5	311	0	0.2	2.7	151.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075101	Olfr1222	ENSMUST00000099794	ENSMUSP00000097382	TRANSLATION	protein_coding	-	CCDS16367.1	-	311	0	0.2	2.7	151.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068154	Insm1	ENSMUST00000089257	ENSMUSP00000092048	TRANSLATION	protein_coding	-	CCDS16830.1	-	521	18	1	0.5	69.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000027326	Knl1	ENSMUST00000028802	ENSMUSP00000028802	TRANSLATION	protein_coding	-	CCDS38203.1	5	2119	0	6.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027326	Knl1	ENSMUST00000153300	ENSMUSP00000120905	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027326	Knl1	ENSMUST00000099542	ENSMUSP00000097140	TRANSLATION	protein_coding	-	CCDS38203.1	5	2119	0	6.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027326	Knl1	ENSMUST00000152380	ENSMUSP00000118646	TRANSLATION	protein_coding	stop	-	1	484	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027326	Knl1	ENSMUST00000028799	ENSMUSP00000028799	TRANSLATION	protein_coding	-	-	1	1612	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074682	Zcchc3	ENSMUST00000099207	ENSMUSP00000096813	TRANSLATION	protein_coding	-	CCDS16884.1	-	400	12	0	1.5	20.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017861	Mybl2	ENSMUST00000018005	ENSMUSP00000018005	TRANSLATION	protein_coding	-	CCDS17006.1	1	704	0	4.15	0.5	375.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017861	Mybl2	ENSMUST00000142729	ENSMUSP00000114710	TRANSLATION	protein_coding	start/stop	-	5	263	0	0	0	190.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017861	Mybl2	ENSMUST00000137620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017861	Mybl2	ENSMUST00000133322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017861	Mybl2	ENSMUST00000138414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049692	Tmem239	ENSMUST00000055421	ENSMUSP00000055299	TRANSLATION	protein_coding	-	CCDS16742.1	1	151	0	0	6.3	271.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000027466	Rbck1	ENSMUST00000144865	ENSMUSP00000118592	TRANSLATION	protein_coding	start/stop	-	5	233	14	2.04	0	65.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027466	Rbck1	ENSMUST00000130165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027466	Rbck1	ENSMUST00000109847	ENSMUSP00000105473	TRANSLATION	protein_coding	-	CCDS38273.1	1	508	19	6.2296	7.5	65.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027466	Rbck1	ENSMUST00000129590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027466	Rbck1	ENSMUST00000128645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027466	Rbck1	ENSMUST00000131889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027466	Rbck1	ENSMUST00000145889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027466	Rbck1	ENSMUST00000028964	ENSMUSP00000028964	TRANSLATION	protein_coding	-	CCDS38273.1	1	508	19	6.2296	7.5	65.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003283	Hck	ENSMUST00000189688	ENSMUSP00000141030	TRANSLATION	protein_coding	-	CCDS50756.1	1	503	18	9.75	5.3	457.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000003283	Hck	ENSMUST00000003370	ENSMUSP00000003370	TRANSLATION	protein_coding	start	-	1	524	18	9.75	3.9	457.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003283	Hck	ENSMUST00000109799	ENSMUSP00000105423	TRANSLATION	protein_coding	-	CCDS50756.1	1	503	18	9.75	5.3	457.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000039069	Mtg2	ENSMUST00000142608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039069	Mtg2	ENSMUST00000136803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039069	Mtg2	ENSMUST00000147264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039069	Mtg2	ENSMUST00000184862	ENSMUSP00000139273	TRANSLATION	nonsense_mediated_decay	-	-	2	231	0	2.8	0	156	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039069	Mtg2	ENSMUST00000146182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039069	Mtg2	ENSMUST00000108901	ENSMUSP00000104529	TRANSLATION	protein_coding	-	CCDS38374.1	5	405	14	4.6	3.9	240	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000039069	Mtg2	ENSMUST00000087563	ENSMUSP00000084843	TRANSLATION	protein_coding	-	CCDS38374.1	5	405	14	4.6	3.9	240	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000063972	Nr6a1	ENSMUST00000123099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063972	Nr6a1	ENSMUST00000112877	ENSMUSP00000108498	TRANSLATION	protein_coding	-	CCDS16012.1	1	495	8	3.46	0.5	167.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000063972	Nr6a1	ENSMUST00000142130	ENSMUSP00000115164	TRANSLATION	protein_coding	stop	-	5	220	8	1.5	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063972	Nr6a1	ENSMUST00000142113	ENSMUSP00000121234	TRANSLATION	protein_coding	stop	-	3	235	8	1.5	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063972	Nr6a1	ENSMUST00000156301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063972	Nr6a1	ENSMUST00000123342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063972	Nr6a1	ENSMUST00000076275	ENSMUSP00000075624	TRANSLATION	protein_coding	-	CCDS16012.1	1	495	8	3.46	0.5	167.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000063972	Nr6a1	ENSMUST00000128688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063972	Nr6a1	ENSMUST00000168098	ENSMUSP00000126009	TRANSLATION	protein_coding	-	CCDS50581.1	5	438	8	3.46	7.5	167.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063972	Nr6a1	ENSMUST00000203202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063972	Nr6a1	ENSMUST00000132636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027522	Stx16	ENSMUST00000087908	ENSMUSP00000085218	TRANSLATION	protein_coding	-	CCDS17147.2	1	326	0	2.95	6.1	97	0	-4,0	-	-	14	PRINCIPAL:2
ENSMUSG00000027522	Stx16	ENSMUST00000044638	ENSMUSP00000039543	TRANSLATION	protein_coding	-	-	5	327	0	2.95	5.6	97	0	-4,0	-	-	13.804	ALTERNATIVE:1
ENSMUSG00000027522	Stx16	ENSMUST00000147038	ENSMUSP00000120279	TRANSLATION	protein_coding	stop	-	5	164	0	0.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027522	Stx16	ENSMUST00000134876	ENSMUSP00000123275	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027522	Stx16	ENSMUST00000155000	ENSMUSP00000119952	TRANSLATION	protein_coding	stop	-	5	88	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027522	Stx16	ENSMUST00000156054	ENSMUSP00000116618	TRANSLATION	protein_coding	start/stop	-	3	258	0	1.45	0	53.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000079602	9230102O04Rik	ENSMUST00000114915	ENSMUSP00000110565	TRANSLATION	protein_coding	-	-	2	82	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000079602	9230102O04Rik	ENSMUST00000125091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078868	Gm14412	ENSMUST00000108959	ENSMUSP00000104587	TRANSLATION	protein_coding	-	-	5	526	60	2.05	0	451.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026835	Fcnb	ENSMUST00000135472	ENSMUSP00000119098	TRANSLATION	protein_coding	stop	-	3	112	0	0.53	0	31.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000026835	Fcnb	ENSMUST00000117486	ENSMUSP00000112625	TRANSLATION	protein_coding	-	-	1	253	2	3.68	0	198.7	0	3,-2	-	-	6.78	MINOR
ENSMUSG00000026835	Fcnb	ENSMUST00000028179	ENSMUSP00000028179	TRANSLATION	protein_coding	-	CCDS15832.1	1	314	6	4.53	0.5	290.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000015087	Rabl6	ENSMUST00000140785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000128942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000140635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000140778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000150206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000143855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000058137	ENSMUSP00000058746	TRANSLATION	protein_coding	-	CCDS38076.1	1	725	15	1.9	0.5	29.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000015087	Rabl6	ENSMUST00000146012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015087	Rabl6	ENSMUST00000135084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086338	Gm13723	ENSMUST00000130722	ENSMUSP00000150854	TRANSLATION	protein_coding	-	-	2	315	0	0.2	5.1	172.8	0	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027518	1700021F07Rik	ENSMUST00000029023	ENSMUSP00000029023	TRANSLATION	protein_coding	-	CCDS50814.1	1	136	0	0	5.1	161.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000026841	Fibcd1	ENSMUST00000028188	ENSMUSP00000028188	TRANSLATION	protein_coding	-	CCDS50564.1	1	459	6	4	7.5	256.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000075142	Olfr74	ENSMUST00000099840	ENSMUSP00000097428	TRANSLATION	protein_coding	-	CCDS16318.1	-	318	0	0.16	1.5	157	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027022	Xirp2	ENSMUST00000238912	ENSMUSP00000159084	TRANSLATION	protein_coding	-	-	-	3512	0	0.2	0	526.5	0	-4,-5	-	-	4.32	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000239053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027022	Xirp2	ENSMUST00000239164	ENSMUSP00000159177	TRANSLATION	protein_coding	start	-	-	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000239060	ENSMUSP00000159181	TRANSLATION	protein_coding	-	-	-	701	8	2.582	0	35.7	0	-4,-2	-	-	12	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000239121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027022	Xirp2	ENSMUST00000134620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027022	Xirp2	ENSMUST00000238878	ENSMUSP00000158861	TRANSLATION	protein_coding	stop	-	-	284	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000238989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027022	Xirp2	ENSMUST00000112347	ENSMUSP00000107966	TRANSLATION	protein_coding	-	CCDS38133.1	1	3283	0	0.2	0.5	526.5	0	-4,-2	-	-	4.32	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000239009	ENSMUSP00000158994	TRANSLATION	protein_coding	-	-	-	930	8	2.582	0	35.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027022	Xirp2	ENSMUST00000028410	ENSMUSP00000028410	TRANSLATION	protein_coding	-	CCDS16082.1	1	3784	8	2.45	0.5	562.2	0	-4,-2	-	-	17.694	PRINCIPAL:1
ENSMUSG00000075117	Olfr1198	ENSMUST00000215179	ENSMUSP00000150548	TRANSLATION	protein_coding	-	CCDS16346.1	5	308	0	0.16	1.5	167.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075117	Olfr1198	ENSMUST00000215529	ENSMUSP00000149844	TRANSLATION	protein_coding	-	CCDS16346.1	3	308	0	0.16	1.5	167.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075117	Olfr1198	ENSMUST00000099814	ENSMUSP00000097402	TRANSLATION	protein_coding	-	CCDS16346.1	-	308	0	0.16	1.5	167.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041660	Bbox1	ENSMUST00000133608	ENSMUSP00000116663	TRANSLATION	protein_coding	stop	-	2	145	4	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041660	Bbox1	ENSMUST00000046233	ENSMUSP00000046302	TRANSLATION	protein_coding	-	CCDS16510.1	1	387	7	8	7.5	154.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000047459	Dynlrb1	ENSMUST00000109682	ENSMUSP00000105304	TRANSLATION	protein_coding	-	CCDS38294.1	1	96	0	2.25	21.5	92.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047459	Dynlrb1	ENSMUST00000135831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047459	Dynlrb1	ENSMUST00000150602	ENSMUSP00000114928	TRANSLATION	protein_coding	-	CCDS71166.1	2	104	0	2.25	0.5	92.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000047459	Dynlrb1	ENSMUST00000054912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049086	Bmyc	ENSMUST00000061483	ENSMUSP00000097885	TRANSLATION	protein_coding	-	CCDS15789.1	-	170	0	0	1.5	134.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038671	Arfrp1	ENSMUST00000170190	ENSMUSP00000126387	TRANSLATION	protein_coding	-	CCDS50853.1	5	154	10	3.764	2.9	125.8	0	-4,-5	-	-	9.36	MINOR
ENSMUSG00000038671	Arfrp1	ENSMUST00000185118	ENSMUSP00000139211	TRANSLATION	nonsense_mediated_decay	-	-	1	121	10	3.17	1.2	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038671	Arfrp1	ENSMUST00000184859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038671	Arfrp1	ENSMUST00000108808	ENSMUSP00000104436	TRANSLATION	protein_coding	-	CCDS17209.1	1	201	17	5.084	17.3	155.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038671	Arfrp1	ENSMUST00000145358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038671	Arfrp1	ENSMUST00000048269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038671	Arfrp1	ENSMUST00000127988	ENSMUSP00000122066	TRANSLATION	protein_coding	-	CCDS17209.1	1	201	17	5.084	17.3	155.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038671	Arfrp1	ENSMUST00000139368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038671	Arfrp1	ENSMUST00000152580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038671	Arfrp1	ENSMUST00000183499	ENSMUSP00000138941	TRANSLATION	nonsense_mediated_decay	-	-	5	62	8	1.82	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038671	Arfrp1	ENSMUST00000130346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038671	Arfrp1	ENSMUST00000152334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017299	Dnttip1	ENSMUST00000109326	ENSMUSP00000104949	TRANSLATION	protein_coding	-	-	1	111	0	1.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017299	Dnttip1	ENSMUST00000135458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017299	Dnttip1	ENSMUST00000109327	ENSMUSP00000104950	TRANSLATION	protein_coding	stop	-	2	211	0	3.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017299	Dnttip1	ENSMUST00000017443	ENSMUSP00000017443	TRANSLATION	protein_coding	-	CCDS17054.1	1	328	0	7.2	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000056115	Tas2r134	ENSMUST00000070028	ENSMUSP00000064657	TRANSLATION	protein_coding	-	CCDS16029.1	-	298	0	0	0.5	247.8	0	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000027318	Adam33	ENSMUST00000184921	ENSMUSP00000139366	TRANSLATION	nonsense_mediated_decay	start	-	5	60	5	1.5	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027318	Adam33	ENSMUST00000127343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027318	Adam33	ENSMUST00000110232	ENSMUSP00000105861	TRANSLATION	protein_coding	-	CCDS16753.1	1	797	19	9.89	0.5	464.8	0	1,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000027318	Adam33	ENSMUST00000135149	ENSMUSP00000122608	TRANSLATION	protein_coding	start	-	1	533	19	9.34	0	384.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027318	Adam33	ENSMUST00000128828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027318	Adam33	ENSMUST00000149625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027318	Adam33	ENSMUST00000132436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027318	Adam33	ENSMUST00000052104	ENSMUSP00000052486	TRANSLATION	protein_coding	-	CCDS50716.1	1	771	19	9.59	0.5	464.8	0	1,-3	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000027318	Adam33	ENSMUST00000132071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027318	Adam33	ENSMUST00000134742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027318	Adam33	ENSMUST00000183552	ENSMUSP00000139344	TRANSLATION	nonsense_mediated_decay	-	-	1	797	19	9.89	0.5	464.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000027318	Adam33	ENSMUST00000147333	ENSMUSP00000117097	TRANSLATION	protein_coding	start	-	1	169	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000027318	Adam33	ENSMUST00000124481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017707	Serinc3	ENSMUST00000017851	ENSMUSP00000017851	TRANSLATION	protein_coding	-	CCDS17013.1	1	472	0	0	2.7	549.7	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000017707	Serinc3	ENSMUST00000129854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015932	Dstn	ENSMUST00000103172	ENSMUSP00000099461	TRANSLATION	protein_coding	-	CCDS16812.1	1	165	0	2.75	19.5	101.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026842	Abl1	ENSMUST00000124726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026842	Abl1	ENSMUST00000156736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026842	Abl1	ENSMUST00000075759	ENSMUSP00000075167	TRANSLATION	protein_coding	-	CCDS50563.1	1	1142	16	10.65	1.5	566.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026842	Abl1	ENSMUST00000124089	ENSMUSP00000117748	TRANSLATION	protein_coding	stop	-	1	114	0	2.5	0	50.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026842	Abl1	ENSMUST00000127714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026842	Abl1	ENSMUST00000028190	ENSMUSP00000028190	TRANSLATION	protein_coding	-	CCDS15901.1	1	1123	16	9.65	1.5	566.4	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000026842	Abl1	ENSMUST00000146537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026842	Abl1	ENSMUST00000123471	ENSMUSP00000142297	TRANSLATION	protein_coding	stop	-	5	64	0	1.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026842	Abl1	ENSMUST00000135233	ENSMUSP00000141320	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026842	Abl1	ENSMUST00000142554	ENSMUSP00000142123	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048911	Rnf24	ENSMUST00000059372	ENSMUSP00000058630	TRANSLATION	protein_coding	-	CCDS16762.1	1	148	8	2.25	9.8	46.6	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000048911	Rnf24	ENSMUST00000110194	ENSMUSP00000105823	TRANSLATION	protein_coding	-	CCDS16762.1	1	148	8	2.25	9.8	46.6	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000048911	Rnf24	ENSMUST00000165420	ENSMUSP00000129843	TRANSLATION	protein_coding	-	CCDS16762.1	3	148	8	2.25	9.8	46.6	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000048911	Rnf24	ENSMUST00000142982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048911	Rnf24	ENSMUST00000183902	ENSMUSP00000139130	TRANSLATION	nonsense_mediated_decay	-	-	1	95	0	0.5	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000075199	Olfr52	ENSMUST00000215138	ENSMUSP00000150060	TRANSLATION	protein_coding	-	CCDS16243.1	5	319	0	0	6.3	188.6	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000075199	Olfr52	ENSMUST00000099905	ENSMUSP00000097489	TRANSLATION	protein_coding	-	CCDS16243.1	-	319	0	0	6.3	188.6	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000026986	Hnmt	ENSMUST00000051416	ENSMUSP00000062747	TRANSLATION	protein_coding	-	CCDS15731.1	1	295	15	5.5	9.5	0	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000026986	Hnmt	ENSMUST00000114497	ENSMUSP00000110141	TRANSLATION	protein_coding	-	CCDS15731.1	1	295	15	5.5	9.5	0	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000026986	Hnmt	ENSMUST00000114498	ENSMUSP00000110142	TRANSLATION	protein_coding	-	CCDS15731.1	1	295	15	5.5	9.5	0	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000026919	Lcn4	ENSMUST00000028283	ENSMUSP00000028283	TRANSLATION	protein_coding	-	CCDS15810.1	1	185	0	3.88	0.5	66.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040174	Alkbh3	ENSMUST00000127231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000125473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000111240	ENSMUSP00000106871	TRANSLATION	protein_coding	-	-	5	287	17	6.4	0	0	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040174	Alkbh3	ENSMUST00000138046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000130289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000138107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000040005	ENSMUSP00000038721	TRANSLATION	protein_coding	-	CCDS38184.1	1	286	17	6.4	4.1	0	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000040174	Alkbh3	ENSMUST00000156763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000126378	ENSMUSP00000122043	TRANSLATION	protein_coding	stop	-	5	202	9	3.65	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040174	Alkbh3	ENSMUST00000126255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040174	Alkbh3	ENSMUST00000130403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036646	Man1b1	ENSMUST00000149464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036646	Man1b1	ENSMUST00000042390	ENSMUSP00000036996	TRANSLATION	protein_coding	-	CCDS15765.1	1	658	0	10.3	0.5	546.3	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036646	Man1b1	ENSMUST00000152245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036646	Man1b1	ENSMUST00000136245	ENSMUSP00000114989	TRANSLATION	protein_coding	stop	-	3	238	0	2.3	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000036646	Man1b1	ENSMUST00000126210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036646	Man1b1	ENSMUST00000131826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061411	Nol4l	ENSMUST00000137553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061411	Nol4l	ENSMUST00000035346	ENSMUSP00000036571	TRANSLATION	protein_coding	-	CCDS50758.1	1	679	3	0	5.3	0	0	-4,-6	-	-	4.622	PRINCIPAL:1
ENSMUSG00000061411	Nol4l	ENSMUST00000156786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061411	Nol4l	ENSMUST00000132770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061411	Nol4l	ENSMUST00000109784	ENSMUSP00000105407	TRANSLATION	protein_coding	-	CCDS50757.1	1	435	0	0	6.3	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000061411	Nol4l	ENSMUST00000129385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026831	1700007K13Rik	ENSMUST00000126242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026831	1700007K13Rik	ENSMUST00000127683	ENSMUSP00000116111	TRANSLATION	protein_coding	stop	-	3	132	0	0	0	101.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026831	1700007K13Rik	ENSMUST00000086370	ENSMUSP00000083557	TRANSLATION	protein_coding	-	CCDS15837.1	1	167	0	0	0.5	146	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025817	Nudt5	ENSMUST00000138549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025817	Nudt5	ENSMUST00000128604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025817	Nudt5	ENSMUST00000179748	ENSMUSP00000136233	TRANSLATION	protein_coding	-	-	5	218	18	6.43	6.6	59.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025817	Nudt5	ENSMUST00000194933	ENSMUSP00000141265	TRANSLATION	protein_coding	stop	-	3	88	7	2.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025817	Nudt5	ENSMUST00000127116	ENSMUSP00000117670	TRANSLATION	protein_coding	stop	-	5	161	17	4.93	0	55.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025817	Nudt5	ENSMUST00000026927	ENSMUSP00000026927	TRANSLATION	protein_coding	-	CCDS15667.1	3	218	18	6.43	6.6	59.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000098488	Pla2g4b	ENSMUST00000134380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098488	Pla2g4b	ENSMUST00000143794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098488	Pla2g4b	ENSMUST00000136042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098488	Pla2g4b	ENSMUST00000126150	ENSMUSP00000118458	TRANSLATION	protein_coding	-	CCDS38209.2	5	791	4	14.44	0.5	168.4	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000098488	Pla2g4b	ENSMUST00000130018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098488	Pla2g4b	ENSMUST00000153571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074671	Tspyl3	ENSMUST00000099194	ENSMUSP00000096799	TRANSLATION	protein_coding	-	CCDS16907.2	-	334	0	0.6	1.5	75.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061195	Olfr1289	ENSMUST00000120021	ENSMUSP00000146801	TRANSLATION	protein_coding	-	-	5	326	0	0.675	1	152.2	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061195	Olfr1289	ENSMUST00000225425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061195	Olfr1289	ENSMUST00000207494	ENSMUSP00000147119	TRANSLATION	protein_coding	-	CCDS16527.1	-	298	0	0.36	0.5	152.2	6	-2,-5	-	-	9.198	MINOR
ENSMUSG00000027361	Gabpb1	ENSMUST00000110424	ENSMUSP00000106054	TRANSLATION	protein_coding	-	CCDS16685.1	1	382	0	4.73	17	96.2	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027361	Gabpb1	ENSMUST00000110425	ENSMUSP00000106055	TRANSLATION	protein_coding	-	CCDS71137.1	1	383	0	4.25	17	96.2	0	-4,-5	-	-	15.04	ALTERNATIVE:1
ENSMUSG00000027361	Gabpb1	ENSMUST00000039978	ENSMUSP00000037673	TRANSLATION	protein_coding	-	CCDS71136.1	1	347	0	4.73	2.9	96.2	0	-4,-5	-	-	12.476	MINOR
ENSMUSG00000027361	Gabpb1	ENSMUST00000089745	ENSMUSP00000087177	TRANSLATION	protein_coding	-	CCDS71135.1	1	233	0	4.21	0.5	96.2	0	-4,-5	-	-	10.962	MINOR
ENSMUSG00000027361	Gabpb1	ENSMUST00000103226	ENSMUSP00000099516	TRANSLATION	protein_coding	-	CCDS16686.1	1	348	0	4.25	2.9	96.2	0	-4,-5	-	-	11.516	MINOR
ENSMUSG00000027361	Gabpb1	ENSMUST00000137335	ENSMUSP00000118358	TRANSLATION	protein_coding	stop	-	3	46	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027361	Gabpb1	ENSMUST00000130263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027361	Gabpb1	ENSMUST00000103227	ENSMUSP00000099517	TRANSLATION	protein_coding	-	CCDS16685.1	1	382	0	4.73	17	96.2	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027361	Gabpb1	ENSMUST00000124972	ENSMUSP00000117355	TRANSLATION	protein_coding	stop	-	3	72	0	2.08	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074918	Inafm2	ENSMUST00000149978	ENSMUSP00000150273	TRANSLATION	protein_coding	-	-	-	152	0	0	5.3	60.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000078935	1700025C18Rik	ENSMUST00000109304	ENSMUSP00000104927	TRANSLATION	protein_coding	-	-	1	89	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000029419	Ajm1	ENSMUST00000187017	ENSMUSP00000139598	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029419	Ajm1	ENSMUST00000188161	ENSMUSP00000140763	TRANSLATION	protein_coding	-	CCDS50532.1	-	974	8	0	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000029419	Ajm1	ENSMUST00000191602	ENSMUSP00000140109	TRANSLATION	protein_coding	-	CCDS50532.1	2	974	8	0	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000029419	Ajm1	ENSMUST00000114217	ENSMUSP00000109855	TRANSLATION	protein_coding	-	CCDS50532.1	2	974	8	0	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000069020	Urm1	ENSMUST00000130542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069020	Urm1	ENSMUST00000149379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069020	Urm1	ENSMUST00000156944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069020	Urm1	ENSMUST00000147325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069020	Urm1	ENSMUST00000091142	ENSMUSP00000088676	TRANSLATION	protein_coding	-	CCDS15859.1	1	101	0	3.25	13.3	134.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000069020	Urm1	ENSMUST00000123021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041255	Tmco5b	ENSMUST00000040856	ENSMUSP00000042247	TRANSLATION	protein_coding	-	CCDS16558.1	1	307	0	0	1.5	392.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015790	Surf1	ENSMUST00000129822	ENSMUSP00000141305	TRANSLATION	nonsense_mediated_decay	start	-	5	41	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000142967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015790	Surf1	ENSMUST00000147110	ENSMUSP00000141238	TRANSLATION	protein_coding	stop	-	5	240	0	0	0	138.7	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000015934	ENSMUSP00000015934	TRANSLATION	protein_coding	-	CCDS50543.1	1	306	0	0	1.5	153	4	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000015790	Surf1	ENSMUST00000133513	ENSMUSP00000141317	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	35	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000167661	ENSMUSP00000128488	TRANSLATION	nonsense_mediated_decay	-	-	2	59	0	0	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000129682	ENSMUSP00000141918	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000183520	ENSMUSP00000139112	TRANSLATION	nonsense_mediated_decay	start	-	5	248	0	0	0	130.9	3	-4,0	-	-	-1	MINOR
ENSMUSG00000015790	Surf1	ENSMUST00000150776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015790	Surf1	ENSMUST00000128665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037259	Dzank1	ENSMUST00000163701	ENSMUSP00000133177	TRANSLATION	protein_coding	-	-	5	779	3	2.61	0.5	59.8	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000037259	Dzank1	ENSMUST00000124823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037259	Dzank1	ENSMUST00000081982	ENSMUSP00000080643	TRANSLATION	protein_coding	-	CCDS38254.1	1	778	3	2.61	0.5	59.8	0	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000037259	Dzank1	ENSMUST00000150816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095156	Olfr1281	ENSMUST00000090326	ENSMUSP00000087798	TRANSLATION	protein_coding	-	CCDS16521.1	-	305	0	0.3	3.9	162.4	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000095156	Olfr1281	ENSMUST00000208176	ENSMUSP00000151304	TRANSLATION	protein_coding	-	CCDS16521.1	2	305	0	0.3	3.9	162.4	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026946	Nmi	ENSMUST00000142868	ENSMUSP00000115428	TRANSLATION	protein_coding	start	-	3	66	0	0	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026946	Nmi	ENSMUST00000112705	ENSMUSP00000108325	TRANSLATION	protein_coding	-	CCDS16031.1	1	314	0	0	0.5	336.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026946	Nmi	ENSMUST00000145481	ENSMUSP00000120647	TRANSLATION	protein_coding	-	CCDS16031.1	1	314	0	0	0.5	336.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026946	Nmi	ENSMUST00000028314	ENSMUSP00000028314	TRANSLATION	protein_coding	-	CCDS16031.1	1	314	0	0	0.5	336.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026946	Nmi	ENSMUST00000145656	ENSMUSP00000122318	TRANSLATION	protein_coding	stop	-	5	75	0	0	0	71.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026946	Nmi	ENSMUST00000123521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032680	6820408C15Rik	ENSMUST00000039961	ENSMUSP00000037024	TRANSLATION	protein_coding	-	CCDS16885.1	1	354	0	0	1.5	339.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032680	6820408C15Rik	ENSMUST00000128737	ENSMUSP00000117627	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	67.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032680	6820408C15Rik	ENSMUST00000153713	ENSMUSP00000120724	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000017817	Jph2	ENSMUST00000017961	ENSMUSP00000017961	TRANSLATION	protein_coding	-	CCDS17008.1	1	696	0	0	0.5	154.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017817	Jph2	ENSMUST00000109425	ENSMUSP00000105052	TRANSLATION	protein_coding	-	CCDS17008.1	1	696	0	0	0.5	154.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017723	Wfdc2	ENSMUST00000146270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017723	Wfdc2	ENSMUST00000109344	ENSMUSP00000104968	TRANSLATION	protein_coding	-	-	3	74	0	0.8	0	45.5	0	4,-1	-	-	7.296	MINOR
ENSMUSG00000017723	Wfdc2	ENSMUST00000109345	ENSMUSP00000104969	TRANSLATION	protein_coding	-	-	3	122	0	1.22	1.7	81.2	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000017723	Wfdc2	ENSMUST00000017867	ENSMUSP00000017867	TRANSLATION	protein_coding	-	CCDS17040.1	1	174	0	1.22	0.5	81.2	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000017723	Wfdc2	ENSMUST00000125051	ENSMUSP00000119391	TRANSLATION	protein_coding	stop	-	3	131	0	0.42	0	35.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000069132	Nxph2	ENSMUST00000102945	ENSMUSP00000100009	TRANSLATION	protein_coding	-	CCDS15729.1	1	261	0	0	7.1	320.2	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000018322	Tomm34	ENSMUST00000132602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018322	Tomm34	ENSMUST00000109384	ENSMUSP00000105010	TRANSLATION	protein_coding	-	CCDS71187.1	1	309	0	4.96	7.5	45.2	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000018322	Tomm34	ENSMUST00000018466	ENSMUSP00000018466	TRANSLATION	protein_coding	-	CCDS17020.1	1	309	0	4.96	7.5	45.2	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000043226	Olfr1009	ENSMUST00000055517	ENSMUSP00000061475	TRANSLATION	protein_coding	-	CCDS16216.1	-	314	0	0.36	4	183.1	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000043226	Olfr1009	ENSMUST00000216443	ENSMUSP00000150450	TRANSLATION	protein_coding	-	CCDS16216.1	5	314	0	0.36	4	183.1	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000043226	Olfr1009	ENSMUST00000213600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078137	Ankrd63	ENSMUST00000104937	ENSMUSP00000100542	TRANSLATION	protein_coding	-	CCDS38201.1	-	390	0	0.2	1.5	46.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000026816	Gtf3c5	ENSMUST00000139580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026816	Gtf3c5	ENSMUST00000113889	ENSMUSP00000109521	TRANSLATION	protein_coding	-	CCDS71012.1	1	520	0	2.58	2.9	276.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026816	Gtf3c5	ENSMUST00000142054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026816	Gtf3c5	ENSMUST00000139553	ENSMUSP00000135165	TRANSLATION	nonsense_mediated_decay	-	-	3	55	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026816	Gtf3c5	ENSMUST00000028157	ENSMUSP00000028157	TRANSLATION	protein_coding	-	CCDS15842.1	1	514	0	2.58	0.5	276.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026816	Gtf3c5	ENSMUST00000150929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026816	Gtf3c5	ENSMUST00000150699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053475	Tnfaip6	ENSMUST00000065927	ENSMUSP00000069231	TRANSLATION	protein_coding	-	CCDS16032.1	1	275	5	4.3	3	225.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000027364	Usp50	ENSMUST00000136319	ENSMUSP00000121578	TRANSLATION	nonsense_mediated_decay	-	-	2	271	4	3.73	0	120.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027364	Usp50	ENSMUST00000028842	ENSMUSP00000028842	TRANSLATION	protein_coding	-	CCDS16688.1	1	390	8	5.38	0.5	215.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027364	Usp50	ENSMUST00000151140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027364	Usp50	ENSMUST00000130356	ENSMUSP00000116873	TRANSLATION	protein_coding	-	-	5	329	6	3.83	0	166.5	0	-4,-5	-	-	10.464	MINOR
ENSMUSG00000027364	Usp50	ENSMUST00000145194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026718	Stam	ENSMUST00000193636	ENSMUSP00000141207	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	1.25	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026718	Stam	ENSMUST00000128777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026718	Stam	ENSMUST00000140694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026718	Stam	ENSMUST00000102960	ENSMUSP00000100025	TRANSLATION	protein_coding	-	CCDS15698.1	1	548	0	10.58	0.5	237.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000026718	Stam	ENSMUST00000138989	ENSMUSP00000121228	TRANSLATION	protein_coding	stop	-	3	207	0	5.6148	0	176.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026718	Stam	ENSMUST00000131734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026718	Stam	ENSMUST00000156901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026718	Stam	ENSMUST00000144944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026718	Stam	ENSMUST00000028050	ENSMUSP00000028050	TRANSLATION	protein_coding	-	-	1	462	0	10.58	0	237.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027624	Epb41l1	ENSMUST00000137067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027624	Epb41l1	ENSMUST00000103137	ENSMUSP00000099426	TRANSLATION	protein_coding	-	CCDS16966.1	1	879	0	7.1	3.9	486.1	0	-4,-5	-	-	13.094	PRINCIPAL:3
ENSMUSG00000027624	Epb41l1	ENSMUST00000109574	ENSMUSP00000105202	TRANSLATION	protein_coding	-	CCDS71170.1	1	730	0	7.1	3.9	484.9	0	-4,-5	-	-	13.022	ALTERNATIVE:2
ENSMUSG00000027624	Epb41l1	ENSMUST00000142048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027624	Epb41l1	ENSMUST00000144013	ENSMUSP00000154929	TRANSLATION	protein_coding	start/stop	-	3	213	0	2	0	202.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000027624	Epb41l1	ENSMUST00000109577	ENSMUSP00000105205	TRANSLATION	protein_coding	-	CCDS71169.1	5	867	0	7.1	6.3	484.9	0	-4,-5	-	-	13.928	ALTERNATIVE:1
ENSMUSG00000027624	Epb41l1	ENSMUST00000125153	ENSMUSP00000121161	TRANSLATION	protein_coding	-	-	1	1556	0	7.1	0	486.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027624	Epb41l1	ENSMUST00000029155	ENSMUSP00000029155	TRANSLATION	protein_coding	-	CCDS16966.1	5	879	0	7.1	3.9	486.1	0	-4,-5	-	-	13.094	PRINCIPAL:3
ENSMUSG00000027624	Epb41l1	ENSMUST00000103136	ENSMUSP00000099425	TRANSLATION	protein_coding	-	CCDS16966.1	1	879	0	7.1	3.9	486.1	0	-4,-5	-	-	13.094	PRINCIPAL:3
ENSMUSG00000026743	Mllt10	ENSMUST00000148229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000133649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000028076	ENSMUSP00000028076	TRANSLATION	protein_coding	-	CCDS15708.1	1	1068	15	5.85	1.7	153.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026743	Mllt10	ENSMUST00000114680	ENSMUSP00000110328	TRANSLATION	protein_coding	-	CCDS15708.1	1	1068	15	5.85	1.7	153.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026743	Mllt10	ENSMUST00000114671	ENSMUSP00000110319	TRANSLATION	protein_coding	-	CCDS57155.1	1	990	9	4.1	0.5	104.8	0	-4,-5	-	-	7.566	MINOR
ENSMUSG00000026743	Mllt10	ENSMUST00000154041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000149786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000150422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000114669	ENSMUSP00000110317	TRANSLATION	protein_coding	-	-	5	525	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026743	Mllt10	ENSMUST00000155352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026743	Mllt10	ENSMUST00000153279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039483	Asb6	ENSMUST00000041726	ENSMUSP00000043462	TRANSLATION	protein_coding	-	CCDS38096.1	1	418	0	3.06	1.5	99.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039483	Asb6	ENSMUST00000148036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039483	Asb6	ENSMUST00000147414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039483	Asb6	ENSMUST00000144330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039483	Asb6	ENSMUST00000129628	ENSMUSP00000142231	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061520	Olfr153	ENSMUST00000217113	ENSMUSP00000149859	TRANSLATION	protein_coding	-	CCDS50627.1	-	307	0	0.2	5.1	162.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000037902	Sirpa	ENSMUST00000099113	ENSMUSP00000096713	TRANSLATION	protein_coding	-	CCDS71143.1	3	295	0	1.18	0.5	65.7	2	2,-2	-	-	2.178	MINOR
ENSMUSG00000037902	Sirpa	ENSMUST00000103203	ENSMUSP00000099492	TRANSLATION	protein_coding	-	CCDS16729.1	5	509	0	3.51	1.5	151.7	2	2,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000037902	Sirpa	ENSMUST00000160952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037902	Sirpa	ENSMUST00000049262	ENSMUSP00000049022	TRANSLATION	protein_coding	-	CCDS71142.1	1	513	0	3.51	1.5	151.7	2	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000037902	Sirpa	ENSMUST00000136554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037902	Sirpa	ENSMUST00000136153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037902	Sirpa	ENSMUST00000127751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037902	Sirpa	ENSMUST00000161620	ENSMUSP00000124048	TRANSLATION	protein_coding	-	CCDS71142.1	1	513	0	3.51	1.5	151.7	2	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000037902	Sirpa	ENSMUST00000163034	ENSMUSP00000124888	TRANSLATION	protein_coding	-	CCDS79845.1	3	172	0	0.18	0.5	0	2	-1,-4	-	-	0	MINOR
ENSMUSG00000037902	Sirpa	ENSMUST00000179001	ENSMUSP00000137611	TRANSLATION	protein_coding	-	CCDS16729.1	5	509	0	3.51	1.5	151.7	2	2,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000037902	Sirpa	ENSMUST00000103202	ENSMUSP00000099491	TRANSLATION	protein_coding	-	CCDS16729.1	1	509	0	3.51	1.5	151.7	2	2,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000037902	Sirpa	ENSMUST00000153491	ENSMUSP00000120324	TRANSLATION	protein_coding	stop	-	5	158	0	1.51	0	65.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000037902	Sirpa	ENSMUST00000162764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037902	Sirpa	ENSMUST00000160276	ENSMUSP00000125004	TRANSLATION	protein_coding	-	CCDS50708.1	1	291	0	1.18	0.5	65.7	2	2,-2	-	-	2.178	MINOR
ENSMUSG00000048388	Fam171b	ENSMUST00000148184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048388	Fam171b	ENSMUST00000051454	ENSMUSP00000062702	TRANSLATION	protein_coding	-	CCDS16182.1	1	821	0	0	0.5	488.5	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000026974	Zmynd19	ENSMUST00000028350	ENSMUSP00000028350	TRANSLATION	protein_coding	-	CCDS15742.1	1	227	8	0.92	16.3	29.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000026974	Zmynd19	ENSMUST00000148042	ENSMUSP00000141788	TRANSLATION	protein_coding	-	CCDS79745.1	1	188	8	0.92	2.8	29.1	0	-4,-5	-	-	18.472	MINOR
ENSMUSG00000016024	Lbp	ENSMUST00000146600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016024	Lbp	ENSMUST00000129811	ENSMUSP00000118297	TRANSLATION	protein_coding	start/stop	-	5	145	0	3.83	0	121.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016024	Lbp	ENSMUST00000109491	ENSMUSP00000105117	TRANSLATION	protein_coding	-	-	2	123	0	3	0	82.2	0	3,-2	-	-	0	MINOR
ENSMUSG00000016024	Lbp	ENSMUST00000016168	ENSMUSP00000016168	TRANSLATION	protein_coding	-	CCDS16988.1	1	481	0	12.91	0.5	488.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000016024	Lbp	ENSMUST00000152541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036949	Slc39a12	ENSMUST00000133258	ENSMUSP00000122795	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000036949	Slc39a12	ENSMUST00000114731	ENSMUSP00000110379	TRANSLATION	protein_coding	-	-	5	653	0	1.38	1	209.4	5	3,-2	-	-	11.754	ALTERNATIVE:2
ENSMUSG00000036949	Slc39a12	ENSMUST00000082290	ENSMUSP00000080911	TRANSLATION	protein_coding	-	CCDS15701.1	1	689	0	1.38	1.5	213.5	5	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000059173	Pde1a	ENSMUST00000134739	ENSMUSP00000120188	TRANSLATION	protein_coding	start/stop	-	5	476	5	9.635	0	385.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059173	Pde1a	ENSMUST00000102652	ENSMUSP00000099712	TRANSLATION	protein_coding	-	CCDS16173.1	1	456	5	9.465	0.5	385.1	0	-4,-5	-	-	16.658	ALTERNATIVE:2
ENSMUSG00000059173	Pde1a	ENSMUST00000102655	ENSMUSP00000099715	TRANSLATION	protein_coding	-	CCDS16172.1	1	545	5	9.465	3.9	385.1	0	-4,-5	-	-	17.658	PRINCIPAL:4
ENSMUSG00000059173	Pde1a	ENSMUST00000146076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059173	Pde1a	ENSMUST00000102654	ENSMUSP00000099714	TRANSLATION	protein_coding	-	CCDS16172.1	5	545	5	9.465	3.9	385.1	0	-4,-5	-	-	17.658	ALTERNATIVE:2
ENSMUSG00000059173	Pde1a	ENSMUST00000102651	ENSMUSP00000099711	TRANSLATION	protein_coding	-	CCDS16174.1	1	465	5	9.465	0.5	385.1	0	-4,-5	-	-	16.658	ALTERNATIVE:2
ENSMUSG00000059173	Pde1a	ENSMUST00000102653	ENSMUSP00000099713	TRANSLATION	protein_coding	-	CCDS16172.1	1	545	5	9.465	3.9	385.1	0	-4,-5	-	-	17.658	PRINCIPAL:4
ENSMUSG00000059173	Pde1a	ENSMUST00000125887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059173	Pde1a	ENSMUST00000183775	ENSMUSP00000139327	TRANSLATION	nonsense_mediated_decay	-	-	5	545	5	9.465	3.9	385.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059173	Pde1a	ENSMUST00000090756	ENSMUSP00000088260	TRANSLATION	protein_coding	-	-	1	420	5	9.045	0	311.9	0	-4,-7	-	-	11.426	MINOR
ENSMUSG00000111517	Olfr1238	ENSMUST00000217237	ENSMUSP00000150367	TRANSLATION	protein_coding	-	CCDS16378.1	5	315	0	0.42	2.7	155.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000111517	Olfr1238	ENSMUST00000099781	ENSMUSP00000097369	TRANSLATION	protein_coding	-	CCDS16378.1	-	315	0	0.42	2.7	155.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000111517	Olfr1238	ENSMUST00000217226	ENSMUSP00000150447	TRANSLATION	protein_coding	-	CCDS16378.1	5	315	0	0.42	2.7	155.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000118578	AL845275.1	ENSMUST00000238876	ENSMUSP00000158902	TRANSLATION	protein_coding	-	-	-	146	0	0	0	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000026664	Phyh	ENSMUST00000027975	ENSMUSP00000027975	TRANSLATION	protein_coding	-	CCDS15660.1	1	338	9	7	2.7	165.9	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000026664	Phyh	ENSMUST00000128738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026664	Phyh	ENSMUST00000146933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027293	Ehd4	ENSMUST00000028755	ENSMUSP00000028755	TRANSLATION	protein_coding	-	CCDS16615.1	1	541	22	6	12.8	110.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000027293	Ehd4	ENSMUST00000152366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027293	Ehd4	ENSMUST00000148073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027293	Ehd4	ENSMUST00000150240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042796	Olfr1032	ENSMUST00000079298	ENSMUSP00000078279	TRANSLATION	protein_coding	-	CCDS16233.1	5	310	0	0.28	7.5	166.8	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042796	Olfr1032	ENSMUST00000062166	ENSMUSP00000054494	TRANSLATION	protein_coding	-	CCDS16233.1	-	310	0	0.28	7.5	166.8	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042796	Olfr1032	ENSMUST00000111589	ENSMUSP00000107216	TRANSLATION	protein_coding	-	CCDS16233.1	5	310	0	0.28	7.5	166.8	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050199	Lgr4	ENSMUST00000142869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050199	Lgr4	ENSMUST00000152584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050199	Lgr4	ENSMUST00000046548	ENSMUSP00000047325	TRANSLATION	protein_coding	-	CCDS38195.1	2	951	0	13.75	6.3	261.5	7	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000050199	Lgr4	ENSMUST00000111037	ENSMUSP00000106666	TRANSLATION	protein_coding	-	-	5	927	0	13	1.2	260.4	7	3,-2	-	-	10.51	MINOR
ENSMUSG00000094747	Olfr1307	ENSMUST00000099606	ENSMUSP00000097201	TRANSLATION	protein_coding	-	CCDS16537.1	-	312	0	0.28	7.6	143.9	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000094747	Olfr1307	ENSMUST00000099604	ENSMUSP00000097199	TRANSLATION	protein_coding	-	CCDS16537.1	5	312	0	0.28	7.6	143.9	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026775	Yme1l1	ENSMUST00000147750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026775	Yme1l1	ENSMUST00000134342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026775	Yme1l1	ENSMUST00000028117	ENSMUSP00000028117	TRANSLATION	protein_coding	-	CCDS15728.1	1	715	16	10.13	6.4	388.7	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000026775	Yme1l1	ENSMUST00000125004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026775	Yme1l1	ENSMUST00000148616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026775	Yme1l1	ENSMUST00000149240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074527	Gm14296	ENSMUST00000099007	ENSMUSP00000096605	TRANSLATION	protein_coding	-	CCDS79875.1	1	134	7	2.45	0.5	108	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074527	Gm14296	ENSMUST00000108931	ENSMUSP00000104559	TRANSLATION	protein_coding	start	-	-	249	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074527	Gm14296	ENSMUST00000135176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074527	Gm14296	ENSMUST00000134982	ENSMUSP00000115243	TRANSLATION	nonsense_mediated_decay	-	-	1	100	0	1.45	0	78.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074527	Gm14296	ENSMUST00000125090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041975	Mettl8	ENSMUST00000124273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041975	Mettl8	ENSMUST00000149181	ENSMUSP00000119863	TRANSLATION	nonsense_mediated_decay	start	-	5	148	9	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000112179	ENSMUSP00000107800	TRANSLATION	nonsense_mediated_decay	-	-	2	206	3	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000112186	ENSMUSP00000107804	TRANSLATION	protein_coding	-	CCDS50600.1	2	388	28	0	0.5	80.6	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000041975	Mettl8	ENSMUST00000148876	ENSMUSP00000115855	TRANSLATION	nonsense_mediated_decay	-	-	1	304	28	0	0	34.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000090849	ENSMUSP00000088359	TRANSLATION	protein_coding	-	-	1	163	7	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000121586	ENSMUSP00000113642	TRANSLATION	protein_coding	-	-	5	281	28	0	0	34.2	0	-4,0	-	-	8.544	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000124781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041975	Mettl8	ENSMUST00000140293	ENSMUSP00000118026	TRANSLATION	protein_coding	start	-	3	110	13	0	0	29.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041975	Mettl8	ENSMUST00000100037	ENSMUSP00000097615	TRANSLATION	protein_coding	-	-	1	341	28	0	0	80.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041975	Mettl8	ENSMUST00000124208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044991	Shld1	ENSMUST00000061891	ENSMUSP00000057009	TRANSLATION	protein_coding	-	CCDS50727.1	1	206	0	0	1.5	322.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044991	Shld1	ENSMUST00000141460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044991	Shld1	ENSMUST00000148271	ENSMUSP00000118968	TRANSLATION	protein_coding	stop	-	3	156	0	0	0	230.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044991	Shld1	ENSMUST00000110132	ENSMUSP00000105759	TRANSLATION	protein_coding	-	CCDS50727.1	1	206	0	0	1.5	322.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036752	Tubb4b	ENSMUST00000043584	ENSMUSP00000042342	TRANSLATION	protein_coding	-	CCDS15753.1	1	445	19	3.5	19.5	376.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036752	Tubb4b	ENSMUST00000145607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061171	Slc38a11	ENSMUST00000155422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061171	Slc38a11	ENSMUST00000127623	ENSMUSP00000120737	TRANSLATION	protein_coding	start	-	5	378	0	0	0	150.4	23	-3,-5	-	-	-1	MINOR
ENSMUSG00000061171	Slc38a11	ENSMUST00000145583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061171	Slc38a11	ENSMUST00000141690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061171	Slc38a11	ENSMUST00000155962	ENSMUSP00000118837	TRANSLATION	protein_coding	start/stop	-	5	205	0	0	0	97.8	13	-4,-5	-	-	-1	MINOR
ENSMUSG00000061171	Slc38a11	ENSMUST00000112420	ENSMUSP00000108039	TRANSLATION	protein_coding	-	CCDS38129.1	1	453	0	0	0.5	217.2	27	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061171	Slc38a11	ENSMUST00000152324	ENSMUSP00000121205	TRANSLATION	protein_coding	stop	-	1	375	0	0	0	191.3	22	-4,-5	-	-	-1	MINOR
ENSMUSG00000061171	Slc38a11	ENSMUST00000124918	ENSMUSP00000120185	TRANSLATION	protein_coding	start	-	5	414	0	0	0	164	23	-4,-5	-	-	-1	MINOR
ENSMUSG00000045106	Ccdc73	ENSMUST00000130611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045106	Ccdc73	ENSMUST00000144358	ENSMUSP00000114374	TRANSLATION	protein_coding	start	-	3	186	0	0	0	248.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045106	Ccdc73	ENSMUST00000151764	ENSMUSP00000120706	TRANSLATION	protein_coding	stop	-	5	438	0	0	0	793.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045106	Ccdc73	ENSMUST00000111114	ENSMUSP00000106743	TRANSLATION	protein_coding	-	CCDS16494.2	5	1066	0	0	0.5	1656.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045106	Ccdc73	ENSMUST00000127840	ENSMUSP00000115091	TRANSLATION	protein_coding	stop	-	3	164	0	0	0	292.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027184	Caprin1	ENSMUST00000132537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027184	Caprin1	ENSMUST00000028607	ENSMUSP00000028607	TRANSLATION	protein_coding	-	CCDS16481.1	1	707	0	3.25	2.7	457.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027184	Caprin1	ENSMUST00000143188	ENSMUSP00000114423	TRANSLATION	protein_coding	start/stop	-	3	254	0	2.25	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027184	Caprin1	ENSMUST00000145606	ENSMUSP00000119327	TRANSLATION	protein_coding	start	-	3	93	0	0	0	76	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027184	Caprin1	ENSMUST00000137572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027184	Caprin1	ENSMUST00000155733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027184	Caprin1	ENSMUST00000146527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027184	Caprin1	ENSMUST00000145697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027184	Caprin1	ENSMUST00000145770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027184	Caprin1	ENSMUST00000111147	ENSMUSP00000106777	TRANSLATION	protein_coding	-	CCDS16481.1	1	707	0	3.25	2.7	457.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027184	Caprin1	ENSMUST00000137390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027184	Caprin1	ENSMUST00000128477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027184	Caprin1	ENSMUST00000141750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027184	Caprin1	ENSMUST00000149175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027184	Caprin1	ENSMUST00000143349	ENSMUSP00000117733	TRANSLATION	protein_coding	start	-	2	214	0	0	0	305.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027188	Pamr1	ENSMUST00000143071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027188	Pamr1	ENSMUST00000139090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027188	Pamr1	ENSMUST00000028612	ENSMUSP00000028612	TRANSLATION	protein_coding	-	CCDS16468.1	1	720	2	1.26	5.1	317.1	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000027188	Pamr1	ENSMUST00000144333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078864	Gm14322	ENSMUST00000148388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078864	Gm14322	ENSMUST00000119838	ENSMUSP00000136870	TRANSLATION	protein_coding	-	CCDS57202.1	5	358	38	2.25	0.5	249.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078864	Gm14322	ENSMUST00000108942	ENSMUSP00000104570	TRANSLATION	protein_coding	start	-	2	357	38	2.25	0.5	249.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075015	Gm10801	ENSMUST00000099684	ENSMUSP00000097276	TRANSLATION	protein_coding	start/stop	-	5	168	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000004105	Angptl2	ENSMUST00000193373	ENSMUSP00000142084	TRANSLATION	protein_coding	stop	-	3	112	1	1	0	68.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000004105	Angptl2	ENSMUST00000139148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004105	Angptl2	ENSMUST00000004208	ENSMUSP00000004208	TRANSLATION	protein_coding	-	CCDS15940.1	1	493	9	3	5.1	249.2	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000004105	Angptl2	ENSMUST00000143252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000100963	Gm28372	ENSMUST00000188900	ENSMUSP00000139502	TRANSLATION	protein_coding,RT	-	-	5	220	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000026851	BC005624	ENSMUST00000028205	ENSMUSP00000028205	TRANSLATION	protein_coding	-	CCDS15892.1	1	289	0	0	8.8	105.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000026851	BC005624	ENSMUST00000152007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026851	BC005624	ENSMUST00000156325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057207	Olfr1028	ENSMUST00000080698	ENSMUSP00000079522	TRANSLATION	protein_coding	-	CCDS16229.1	-	324	0	0.42	1.5	186	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000082079	Dnmt3c	ENSMUST00000119996	ENSMUSP00000153622	TRANSLATION	protein_coding	-	-	-	740	12	12.62	0	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039092	Sptlc3	ENSMUST00000110083	ENSMUSP00000105710	TRANSLATION	protein_coding	-	CCDS16800.1	1	563	12	6.18	1.5	192.6	1	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039092	Sptlc3	ENSMUST00000047370	ENSMUSP00000048313	TRANSLATION	protein_coding	-	CCDS16800.1	1	563	12	6.18	1.5	192.6	1	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027419	Pcsk2	ENSMUST00000124751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027419	Pcsk2	ENSMUST00000028905	ENSMUSP00000028905	TRANSLATION	protein_coding	-	CCDS16810.1	1	637	22	8.25	8.8	297.5	0	-1,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000043342	Hoxd9	ENSMUST00000059272	ENSMUSP00000058490	TRANSLATION	protein_coding	-	CCDS16142.1	1	339	0	1	0.5	224.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074825	Itpripl1	ENSMUST00000110386	ENSMUSP00000106016	TRANSLATION	protein_coding	-	CCDS50701.1	1	547	0	0.16	7.5	46.7	1	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000074825	Itpripl1	ENSMUST00000132773	ENSMUSP00000118487	TRANSLATION	protein_coding	-	-	1	163	0	0	0	0	0	-2,-4	-	-	0	MINOR
ENSMUSG00000074825	Itpripl1	ENSMUST00000154021	ENSMUSP00000122289	TRANSLATION	protein_coding	-	CCDS50701.1	1	547	0	0.16	7.5	46.7	1	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000038914	Dido1	ENSMUST00000103055	ENSMUSP00000099344	TRANSLATION	protein_coding	-	CCDS17184.1	1	614	8	1	0.5	43.9	1	-4,-5	-	-	7.998	MINOR
ENSMUSG00000038914	Dido1	ENSMUST00000103056	ENSMUSP00000099345	TRANSLATION	protein_coding	-	CCDS17183.1	1	1183	8	3	0.5	238.3	0	-4,-5	-	-	17.706	ALTERNATIVE:2
ENSMUSG00000038914	Dido1	ENSMUST00000130986	ENSMUSP00000119689	TRANSLATION	protein_coding	-	CCDS17184.1	1	614	8	1	0.5	43.9	1	-4,-5	-	-	7.998	MINOR
ENSMUSG00000038914	Dido1	ENSMUST00000103054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038914	Dido1	ENSMUST00000037764	ENSMUSP00000048315	TRANSLATION	protein_coding	-	-	1	643	0	2	0	194.4	0	-4,-2	-	-	7.074	MINOR
ENSMUSG00000038914	Dido1	ENSMUST00000087517	ENSMUSP00000084794	TRANSLATION	protein_coding	-	CCDS17182.1	1	2256	8	3	0.5	243.2	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000038914	Dido1	ENSMUST00000103057	ENSMUSP00000099346	TRANSLATION	protein_coding	-	CCDS17183.1	1	1183	8	3	0.5	238.3	0	-4,-5	-	-	17.706	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000028121	ENSMUSP00000028121	TRANSLATION	protein_coding	-	CCDS50515.1	1	473	14	3.55	1.5	92.4	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000228856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026781	Acbd5	ENSMUST00000227816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026781	Acbd5	ENSMUST00000226252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026781	Acbd5	ENSMUST00000226571	ENSMUSP00000154188	TRANSLATION	protein_coding	-	-	-	519	14	3.55	1.5	92.4	1	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000228050	ENSMUSP00000154043	TRANSLATION	protein_coding	-	-	-	520	14	3.55	1.5	92.4	1	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000227489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026781	Acbd5	ENSMUST00000144088	ENSMUSP00000121395	TRANSLATION	protein_coding	stop	-	3	52	9	1.5	0	40.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026781	Acbd5	ENSMUST00000114529	ENSMUSP00000110175	TRANSLATION	protein_coding	-	CCDS57156.1	1	509	14	3.55	1.5	92.4	1	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000227612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026781	Acbd5	ENSMUST00000228778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026781	Acbd5	ENSMUST00000227809	ENSMUSP00000154023	TRANSLATION	protein_coding	-	CCDS50516.1	-	472	14	3.55	1.5	92.4	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000114523	ENSMUSP00000110169	TRANSLATION	protein_coding	-	CCDS50515.1	1	473	14	3.55	1.5	92.4	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000228891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026781	Acbd5	ENSMUST00000114526	ENSMUSP00000110172	TRANSLATION	protein_coding	-	CCDS50514.1	1	508	14	3.55	1.5	92.4	1	-3,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000026781	Acbd5	ENSMUST00000226938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026781	Acbd5	ENSMUST00000155602	ENSMUSP00000117325	TRANSLATION	protein_coding	-	-	2	484	14	3.55	0.5	92.4	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026781	Acbd5	ENSMUST00000227663	ENSMUSP00000154518	TRANSLATION	protein_coding	-	-	-	483	14	3.55	0.5	92.4	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000045503	Sys1	ENSMUST00000072452	ENSMUSP00000072275	TRANSLATION	protein_coding	-	CCDS50793.1	1	156	0	0	19.5	181.1	5	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000045503	Sys1	ENSMUST00000138268	ENSMUSP00000117507	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	0	2.4	65.3	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000045503	Sys1	ENSMUST00000142347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045503	Sys1	ENSMUST00000142892	ENSMUSP00000114360	TRANSLATION	nonsense_mediated_decay	-	-	2	76	0	0	2.4	65.3	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000045503	Sys1	ENSMUST00000109352	ENSMUSP00000104976	TRANSLATION	protein_coding	-	CCDS50793.1	5	156	0	0	19.5	181.1	5	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000045503	Sys1	ENSMUST00000155250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045503	Sys1	ENSMUST00000125086	ENSMUSP00000121900	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	0	19.5	181.1	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000111456	Olfr1245	ENSMUST00000214870	ENSMUSP00000149075	TRANSLATION	protein_coding	-	CCDS16384.1	-	307	0	0.36	2.7	161.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000111456	Olfr1245	ENSMUST00000217402	ENSMUSP00000150791	TRANSLATION	protein_coding	-	CCDS16384.1	5	307	0	0.36	2.7	161.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044863	Defb36	ENSMUST00000058086	ENSMUSP00000059665	TRANSLATION	protein_coding	-	CCDS38279.1	1	67	0	0	6.3	36.3	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000027368	Dusp2	ENSMUST00000146479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027368	Dusp2	ENSMUST00000028846	ENSMUSP00000028846	TRANSLATION	protein_coding	-	CCDS16699.1	1	318	9	3.08	1.5	186.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000034059	Ypel4	ENSMUST00000238573	ENSMUSP00000158708	TRANSLATION	protein_coding	-	-	-	158	4	0	0	50.9	0	-4,-7	-	-	10	MINOR
ENSMUSG00000034059	Ypel4	ENSMUST00000151399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034059	Ypel4	ENSMUST00000090729	ENSMUSP00000088231	TRANSLATION	protein_coding	-	CCDS16192.1	1	127	4	0	10.8	50.9	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000034059	Ypel4	ENSMUST00000151647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034059	Ypel4	ENSMUST00000111643	ENSMUSP00000107270	TRANSLATION	nonsense_mediated_decay	-	-	5	55	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051373	Plpp7	ENSMUST00000057423	ENSMUSP00000054337	TRANSLATION	protein_coding	-	CCDS15906.1	1	271	4	0	8.8	51.8	2	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000051373	Plpp7	ENSMUST00000146502	ENSMUSP00000141805	TRANSLATION	protein_coding	start	-	1	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051373	Plpp7	ENSMUST00000140762	ENSMUSP00000141597	TRANSLATION	protein_coding	-	-	3	115	4	0	0	51.5	0	-4,-7	-	-	9.964	MINOR
ENSMUSG00000034683	Ppp1r1c	ENSMUST00000040863	ENSMUSP00000042784	TRANSLATION	protein_coding	-	CCDS79810.1	1	76	0	0	0.5	75.7	0	-4,-6	-	-	4.14	MINOR
ENSMUSG00000034683	Ppp1r1c	ENSMUST00000090760	ENSMUSP00000088265	TRANSLATION	protein_coding	-	CCDS16171.1	1	108	0	0	7.6	106.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000034683	Ppp1r1c	ENSMUST00000144432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034683	Ppp1r1c	ENSMUST00000111780	ENSMUSP00000107410	TRANSLATION	protein_coding	-	CCDS71081.1	1	91	0	0	1.5	103.9	0	-4,-6	-	-	6.06	MINOR
ENSMUSG00000034683	Ppp1r1c	ENSMUST00000141978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026975	Dph7	ENSMUST00000146382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026975	Dph7	ENSMUST00000135339	ENSMUSP00000142067	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026975	Dph7	ENSMUST00000143253	ENSMUSP00000142315	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026975	Dph7	ENSMUST00000126909	ENSMUSP00000141547	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026975	Dph7	ENSMUST00000124383	ENSMUSP00000142220	TRANSLATION	nonsense_mediated_decay	-	-	2	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026975	Dph7	ENSMUST00000028351	ENSMUSP00000028351	TRANSLATION	protein_coding	-	CCDS15743.1	1	477	0	2.355	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026975	Dph7	ENSMUST00000153375	ENSMUSP00000141890	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015337	Endog	ENSMUST00000015481	ENSMUSP00000015481	TRANSLATION	protein_coding	-	CCDS15872.1	1	294	3	2.8	1.5	209.9	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000118600	AL929275.1	ENSMUST00000239231	ENSMUSP00000159261	TRANSLATION	protein_coding	-	-	-	32	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000059873	Olfr1029	ENSMUST00000217244	ENSMUSP00000150637	TRANSLATION	protein_coding	-	CCDS16230.1	5	324	0	0.42	1.5	186.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059873	Olfr1029	ENSMUST00000082191	ENSMUSP00000080828	TRANSLATION	protein_coding	-	CCDS16230.1	-	324	0	0.42	1.5	186.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017307	Acot8	ENSMUST00000103094	ENSMUSP00000099383	TRANSLATION	protein_coding	-	CCDS17057.1	1	320	0	5.16	2.9	215.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017307	Acot8	ENSMUST00000017451	ENSMUSP00000017451	TRANSLATION	protein_coding	-	-	1	268	0	3.26	0	135.1	0	-4,-5	-	-	3.402	MINOR
ENSMUSG00000017307	Acot8	ENSMUST00000136767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017307	Acot8	ENSMUST00000134611	ENSMUSP00000133718	TRANSLATION	nonsense_mediated_decay	-	-	5	113	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017307	Acot8	ENSMUST00000133053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015619	Gata3	ENSMUST00000153509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015619	Gata3	ENSMUST00000102976	ENSMUSP00000100041	TRANSLATION	protein_coding	-	CCDS15674.1	1	443	8	2.6	14.8	106.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015619	Gata3	ENSMUST00000130615	ENSMUSP00000119730	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015619	Gata3	ENSMUST00000151456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015619	Gata3	ENSMUST00000142305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015619	Gata3	ENSMUST00000147533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078197	Gm17374	ENSMUST00000104994	ENSMUSP00000100610	TRANSLATION	protein_coding	start/stop	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000062272	Olfr1129	ENSMUST00000081034	ENSMUSP00000079823	TRANSLATION	protein_coding	-	CCDS16296.1	-	314	0	0.36	1.5	176.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062272	Olfr1129	ENSMUST00000213315	ENSMUSP00000151009	TRANSLATION	protein_coding	-	CCDS16296.1	2	314	0	0.36	1.5	176.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062272	Olfr1129	ENSMUST00000214773	ENSMUSP00000150986	TRANSLATION	protein_coding	-	CCDS16296.1	5	314	0	0.36	1.5	176.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050772	Olfr1124	ENSMUST00000215909	ENSMUSP00000150244	TRANSLATION	protein_coding	-	CCDS16291.1	5	318	0	0.36	1.5	173.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050772	Olfr1124	ENSMUST00000062494	ENSMUSP00000062513	TRANSLATION	protein_coding	-	CCDS16291.1	-	318	0	0.36	1.5	173.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032679	Cd59a	ENSMUST00000153312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032679	Cd59a	ENSMUST00000168176	ENSMUSP00000132774	TRANSLATION	protein_coding	-	CCDS16487.1	2	123	0	1.6	0.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032679	Cd59a	ENSMUST00000040423	ENSMUSP00000048041	TRANSLATION	protein_coding	-	CCDS16487.1	1	123	0	1.6	0.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027589	Pcmtd2	ENSMUST00000139434	ENSMUSP00000115096	TRANSLATION	protein_coding	stop	-	2	184	19	1.7	0	77.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027589	Pcmtd2	ENSMUST00000029116	ENSMUSP00000029116	TRANSLATION	protein_coding	-	CCDS17224.1	1	359	20	2.63	2.7	95.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027589	Pcmtd2	ENSMUST00000155970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027589	Pcmtd2	ENSMUST00000145475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027589	Pcmtd2	ENSMUST00000142989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027589	Pcmtd2	ENSMUST00000108754	ENSMUSP00000104385	TRANSLATION	protein_coding	-	CCDS71224.1	1	276	19	2.03	1.5	90.6	0	-4,-5	-	-	15.684	MINOR
ENSMUSG00000027589	Pcmtd2	ENSMUST00000122811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027589	Pcmtd2	ENSMUST00000124346	ENSMUSP00000115743	TRANSLATION	protein_coding	start	-	3	155	7	1.03	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027589	Pcmtd2	ENSMUST00000137893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000247	Lhx2	ENSMUST00000000253	ENSMUSP00000000253	TRANSLATION	protein_coding	-	CCDS16008.1	1	406	15	4.08	8.8	186.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000000247	Lhx2	ENSMUST00000133661	ENSMUSP00000115179	TRANSLATION	protein_coding	stop	-	2	192	15	2.48	0	119.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000247	Lhx2	ENSMUST00000149664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000247	Lhx2	ENSMUST00000143783	ENSMUSP00000114797	TRANSLATION	protein_coding	-	CCDS71048.1	1	365	15	4.08	1.7	186.7	0	-4,-5	-	-	18.27	MINOR
ENSMUSG00000000247	Lhx2	ENSMUST00000155964	ENSMUSP00000121462	TRANSLATION	protein_coding	stop	-	2	108	14	2	0	101.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000247	Lhx2	ENSMUST00000176229	ENSMUSP00000135402	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000247	Lhx2	ENSMUST00000175896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027445	Cst9	ENSMUST00000028935	ENSMUSP00000028935	TRANSLATION	protein_coding	-	CCDS16850.1	1	137	0	1.83	1.5	35.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035399	Oser1	ENSMUST00000141301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035399	Oser1	ENSMUST00000046908	ENSMUSP00000039190	TRANSLATION	protein_coding	-	CCDS17009.1	1	291	0	0	7.5	306	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035399	Oser1	ENSMUST00000140454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035399	Oser1	ENSMUST00000127038	ENSMUSP00000123124	TRANSLATION	protein_coding	stop	-	5	70	0	0	0	133.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035399	Oser1	ENSMUST00000139142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035399	Oser1	ENSMUST00000104954	ENSMUSP00000131932	TRANSLATION	protein_coding	-	CCDS17009.1	1	291	0	0	7.5	306	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035399	Oser1	ENSMUST00000123659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050368	Hoxd10	ENSMUST00000061745	ENSMUSP00000062412	TRANSLATION	protein_coding	-	CCDS16141.1	1	340	0	1	10.6	72.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027670	Ocstamp	ENSMUST00000029213	ENSMUSP00000029213	TRANSLATION	protein_coding	-	CCDS17080.1	1	498	0	0	0.5	109.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000036770	Stpg3	ENSMUST00000043774	ENSMUSP00000037603	TRANSLATION	protein_coding	-	CCDS50525.1	1	306	0	0	1.5	30.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036770	Stpg3	ENSMUST00000155706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036770	Stpg3	ENSMUST00000114363	ENSMUSP00000110003	TRANSLATION	protein_coding	-	-	1	251	0	0	1.5	30.4	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000036770	Stpg3	ENSMUST00000149509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036770	Stpg3	ENSMUST00000124661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075074	Olfr1254	ENSMUST00000111523	ENSMUSP00000107148	TRANSLATION	protein_coding	-	CCDS16392.1	3	314	0	0.2	1.5	156.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075074	Olfr1254	ENSMUST00000216587	ENSMUSP00000149507	TRANSLATION	protein_coding	-	CCDS16392.1	5	314	0	0.2	1.5	156.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075074	Olfr1254	ENSMUST00000099764	ENSMUSP00000097352	TRANSLATION	protein_coding	-	CCDS16392.1	-	314	0	0.2	1.5	156.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075316	Scn9a	ENSMUST00000141603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075316	Scn9a	ENSMUST00000112354	ENSMUSP00000107973	TRANSLATION	protein_coding	-	-	5	1973	4	8.1	0.5	1312.4	13	-4,-7	-	-	14.854	MINOR
ENSMUSG00000075316	Scn9a	ENSMUST00000169900	ENSMUSP00000131711	TRANSLATION	protein_coding	-	-	5	1973	4	8.1	0.5	1312.3	12	-4,-7	-	-	14.848	MINOR
ENSMUSG00000075316	Scn9a	ENSMUST00000151234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075316	Scn9a	ENSMUST00000100063	ENSMUSP00000097641	TRANSLATION	protein_coding	-	-	5	1975	4	8.1	0	1313.1	13	-4,-7	-	-	14.896	MINOR
ENSMUSG00000075316	Scn9a	ENSMUST00000100064	ENSMUSP00000097642	TRANSLATION	protein_coding	-	CCDS71063.1	1	1984	4	8.1	1.5	1331.5	13	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000075316	Scn9a	ENSMUST00000164384	ENSMUSP00000126528	TRANSLATION	protein_coding	-	-	5	1984	4	8.1	1.5	1331.5	13	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000075204	Olfr1039	ENSMUST00000216566	ENSMUSP00000149830	TRANSLATION	protein_coding	-	CCDS16238.1	5	319	0	0.2	0.5	169.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075204	Olfr1039	ENSMUST00000214364	ENSMUSP00000150584	TRANSLATION	protein_coding	-	CCDS16238.1	5	319	0	0.2	0.5	169.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075204	Olfr1039	ENSMUST00000099910	ENSMUSP00000097494	TRANSLATION	protein_coding	-	CCDS16238.1	-	319	0	0.2	0.5	169.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023206	Il15ra	ENSMUST00000135341	ENSMUSP00000132731	TRANSLATION	protein_coding	-	CCDS15687.1	3	123	0	0	0.5	0	2	-4,-7	-	-	0	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000114834	ENSMUSP00000110483	TRANSLATION	protein_coding	-	CCDS70978.1	1	197	0	2.53	0.5	22.9	2	2,-3	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000023206	Il15ra	ENSMUST00000148748	ENSMUSP00000132058	TRANSLATION	protein_coding	-	CCDS70980.1	1	103	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000139774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023206	Il15ra	ENSMUST00000114831	ENSMUSP00000110480	TRANSLATION	protein_coding	-	CCDS70977.1	1	230	0	2.53	0.5	22.9	2	2,-3	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000023206	Il15ra	ENSMUST00000191662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023206	Il15ra	ENSMUST00000126394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023206	Il15ra	ENSMUST00000130245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023206	Il15ra	ENSMUST00000138856	ENSMUSP00000120539	TRANSLATION	protein_coding	stop	-	2	89	0	0.95	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000133975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023206	Il15ra	ENSMUST00000138349	ENSMUSP00000131473	TRANSLATION	protein_coding	-	CCDS15687.1	1	123	0	0	0.5	0	2	-4,-7	-	-	0	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000114833	ENSMUSP00000110482	TRANSLATION	protein_coding	-	CCDS70979.1	1	166	0	1.83	0.5	22.9	2	2,-3	-	-	10.122	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000078834	ENSMUSP00000077878	TRANSLATION	protein_coding	-	CCDS15686.1	5	263	0	2.662	0.5	22.9	2	2,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000023206	Il15ra	ENSMUST00000128156	ENSMUSP00000126364	TRANSLATION	protein_coding	-	CCDS15687.1	1	123	0	0	0.5	0	2	-4,-7	-	-	0	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000114832	ENSMUSP00000110481	TRANSLATION	protein_coding	-	-	5	155	0	1.83	0.5	22.9	2	2,-3	-	-	10.122	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000124448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023206	Il15ra	ENSMUST00000123600	ENSMUSP00000130792	TRANSLATION	protein_coding	start	-	1	155	0	1.162	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023206	Il15ra	ENSMUST00000091456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078902	Gm14443	ENSMUST00000127251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078902	Gm14443	ENSMUST00000109054	ENSMUSP00000104682	TRANSLATION	protein_coding	-	-	5	610	74	1.85	0	486.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050600	Zfp831	ENSMUST00000059452	ENSMUSP00000060255	TRANSLATION	protein_coding	-	CCDS38361.1	5	1628	8	0	0.5	24	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060227	Casc4	ENSMUST00000089912	ENSMUSP00000087357	TRANSLATION	protein_coding	-	CCDS16650.1	1	402	0	0	0.5	0	1	0,-4	-	-	0	MINOR
ENSMUSG00000060227	Casc4	ENSMUST00000089915	ENSMUSP00000087360	TRANSLATION	protein_coding	-	CCDS50686.1	2	346	0	0	0.5	0	1	0,-4	-	-	0	MINOR
ENSMUSG00000060227	Casc4	ENSMUST00000127475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060227	Casc4	ENSMUST00000110586	ENSMUSP00000106216	TRANSLATION	protein_coding	-	CCDS57184.1	1	379	0	0	5.3	0	1	0,-4	-	-	1.986	ALTERNATIVE:1
ENSMUSG00000060227	Casc4	ENSMUST00000078752	ENSMUSP00000077811	TRANSLATION	protein_coding	-	CCDS57183.1	1	435	0	0	7.5	0	1	0,-4	-	-	3	PRINCIPAL:4
ENSMUSG00000060227	Casc4	ENSMUST00000136023	ENSMUSP00000117883	TRANSLATION	protein_coding	start	-	3	267	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060227	Casc4	ENSMUST00000135416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060227	Casc4	ENSMUST00000126256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027395	Polr1b	ENSMUST00000028874	ENSMUSP00000028874	TRANSLATION	protein_coding	-	-	1	754	2	8.78	0	328.9	0	-4,-5	-	-	2.454	MINOR
ENSMUSG00000027395	Polr1b	ENSMUST00000103205	ENSMUSP00000099494	TRANSLATION	protein_coding	-	CCDS16720.1	1	1135	9	11.22	6.6	794.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027395	Polr1b	ENSMUST00000144004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027395	Polr1b	ENSMUST00000147727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027395	Polr1b	ENSMUST00000133345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037034	Pax1	ENSMUST00000126068	ENSMUSP00000119667	TRANSLATION	protein_coding	stop	-	5	384	0	1	0	241.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000037034	Pax1	ENSMUST00000109968	ENSMUSP00000105594	TRANSLATION	protein_coding	-	CCDS16835.2	1	446	0	1	0.5	241.1	0	0,4	-	-	12	PRINCIPAL:1
ENSMUSG00000037034	Pax1	ENSMUST00000156584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043415	Otud1	ENSMUST00000052168	ENSMUSP00000100617	TRANSLATION	protein_coding	-	CCDS50508.1	-	454	0	0.8	0.5	87.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079170	Gm13941	ENSMUST00000127918	ENSMUSP00000115383	TRANSLATION	protein_coding	start/stop	-	3	245	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000009030	Pdcl	ENSMUST00000138314	ENSMUSP00000145483	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009030	Pdcl	ENSMUST00000147703	ENSMUSP00000119372	TRANSLATION	protein_coding	stop	-	3	193	0	1.4	0	291.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009030	Pdcl	ENSMUST00000009174	ENSMUSP00000009174	TRANSLATION	protein_coding	-	CCDS15998.1	1	301	0	2.4	1.5	526.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009030	Pdcl	ENSMUST00000112940	ENSMUSP00000108562	TRANSLATION	protein_coding	-	CCDS15998.1	1	301	0	2.4	1.5	526.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037143	Cfap61	ENSMUST00000133433	ENSMUSP00000118411	TRANSLATION	protein_coding	-	-	5	1230	17	0	0	310.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037143	Cfap61	ENSMUST00000138774	ENSMUSP00000120838	TRANSLATION	protein_coding	-	-	1	183	0	0	0	128.5	0	-4,-1	-	-	0	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000118002	ENSMUSP00000113529	TRANSLATION	protein_coding	-	-	1	198	0	0	0	181.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000150771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037143	Cfap61	ENSMUST00000125223	ENSMUSP00000121560	TRANSLATION	protein_coding	start/stop	-	5	294	17	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000116398	ENSMUSP00000112099	TRANSLATION	protein_coding	-	CCDS50736.1	1	267	0	0	0.5	261.7	0	-4,-7	-	-	3.048	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000152515	ENSMUSP00000116283	TRANSLATION	protein_coding	-	-	3	147	0	0	0	143.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000130168	ENSMUSP00000121294	TRANSLATION	protein_coding	stop	-	1	192	0	0	0	188.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000144066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037143	Cfap61	ENSMUST00000146891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037143	Cfap61	ENSMUST00000155214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037143	Cfap61	ENSMUST00000143896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037143	Cfap61	ENSMUST00000126415	ENSMUSP00000118626	TRANSLATION	protein_coding	-	-	1	617	0	0	0	310.9	0	-4,-7	-	-	6	MINOR
ENSMUSG00000037143	Cfap61	ENSMUST00000167179	ENSMUSP00000129303	TRANSLATION	protein_coding	-	-	-	60	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090059	Olfr1062	ENSMUST00000217481	ENSMUSP00000149742	TRANSLATION	protein_coding	-	CCDS38171.1	5	315	0	0.3	6.3	157.2	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000090059	Olfr1062	ENSMUST00000105213	ENSMUSP00000100848	TRANSLATION	protein_coding	-	CCDS38171.1	-	315	0	0.3	6.3	157.2	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000090059	Olfr1062	ENSMUST00000216166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063145	Bbs5	ENSMUST00000149276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063145	Bbs5	ENSMUST00000144240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063145	Bbs5	ENSMUST00000112286	ENSMUSP00000107905	TRANSLATION	protein_coding	-	-	5	320	0	0	2.4	402.6	0	-4,-5	-	-	0.34	MINOR
ENSMUSG00000063145	Bbs5	ENSMUST00000134659	ENSMUSP00000119377	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	0	0	120.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063145	Bbs5	ENSMUST00000143165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063145	Bbs5	ENSMUST00000074963	ENSMUSP00000074494	TRANSLATION	protein_coding	-	CCDS16094.1	1	341	0	0	17.5	524.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000063145	Bbs5	ENSMUST00000130061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063145	Bbs5	ENSMUST00000127806	ENSMUSP00000121691	TRANSLATION	protein_coding	start	-	5	92	0	0	0	59.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026984	Il1f6	ENSMUST00000144442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026984	Il1f6	ENSMUST00000028361	ENSMUSP00000028361	TRANSLATION	protein_coding	-	CCDS15734.1	1	160	0	2.8	1.5	56.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040506	Ambra1	ENSMUST00000045699	ENSMUSP00000048898	TRANSLATION	protein_coding	-	-	5	1180	0	3.43	5.1	0	0	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000040506	Ambra1	ENSMUST00000142224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040506	Ambra1	ENSMUST00000099712	ENSMUSP00000097299	TRANSLATION	protein_coding	-	CCDS38180.1	1	1209	0	3.43	5.1	0	0	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000040506	Ambra1	ENSMUST00000124132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040506	Ambra1	ENSMUST00000111316	ENSMUSP00000106948	TRANSLATION	protein_coding	-	-	5	1240	0	3.43	3.4	0	0	-4,-7	-	-	7.17	ALTERNATIVE:2
ENSMUSG00000040506	Ambra1	ENSMUST00000045705	ENSMUSP00000049258	TRANSLATION	protein_coding	-	CCDS38179.1	1	1300	0	3.43	3.9	0	0	-4,-7	-	-	7.414	PRINCIPAL:4
ENSMUSG00000040506	Ambra1	ENSMUST00000133490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040506	Ambra1	ENSMUST00000111317	ENSMUSP00000106949	TRANSLATION	protein_coding	-	-	5	1180	0	3.43	5.1	0	0	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000040506	Ambra1	ENSMUST00000156496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027225	Duoxa2	ENSMUST00000028656	ENSMUSP00000028656	TRANSLATION	protein_coding	-	CCDS16660.1	1	320	0	0	6.3	369	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027312	Atrn	ENSMUST00000151364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027312	Atrn	ENSMUST00000028781	ENSMUSP00000028781	TRANSLATION	protein_coding	-	CCDS16751.1	1	1428	2	5.01	0.5	276.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027312	Atrn	ENSMUST00000132557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027312	Atrn	ENSMUST00000134964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027312	Atrn	ENSMUST00000156982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006471	Ndor1	ENSMUST00000137355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006471	Ndor1	ENSMUST00000132591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006471	Ndor1	ENSMUST00000123472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006471	Ndor1	ENSMUST00000100329	ENSMUSP00000097903	TRANSLATION	protein_coding	-	CCDS57157.1	1	531	50	9.85	0.5	279.7	0	-2,-5	-	-	11.154	MINOR
ENSMUSG00000006471	Ndor1	ENSMUST00000148589	ENSMUSP00000123958	TRANSLATION	nonsense_mediated_decay	-	-	2	82	6	1	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000006471	Ndor1	ENSMUST00000132128	ENSMUSP00000125018	TRANSLATION	nonsense_mediated_decay	-	-	3	71	11	1	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000006471	Ndor1	ENSMUST00000147866	ENSMUSP00000125259	TRANSLATION	protein_coding	stop	-	5	212	24	3.875	0	76.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000006471	Ndor1	ENSMUST00000141808	ENSMUSP00000123247	TRANSLATION	protein_coding	start/stop	-	3	225	20	4.448	0	79.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000006471	Ndor1	ENSMUST00000114349	ENSMUSP00000109989	TRANSLATION	protein_coding	-	CCDS38069.1	1	598	52	11.798	1.5	306.7	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006471	Ndor1	ENSMUST00000129705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027224	Duoxa1	ENSMUST00000110537	ENSMUSP00000106166	TRANSLATION	protein_coding	-	CCDS16661.1	1	341	0	0	2.7	371.7	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027224	Duoxa1	ENSMUST00000148417	ENSMUSP00000116963	TRANSLATION	protein_coding	stop	-	5	209	0	0	0	293.5	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000027224	Duoxa1	ENSMUST00000147788	ENSMUSP00000116280	TRANSLATION	protein_coding	stop	-	3	134	0	0	0	172.3	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000027224	Duoxa1	ENSMUST00000154412	ENSMUSP00000116911	TRANSLATION	protein_coding	stop	-	5	100	0	0	0	110	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000027224	Duoxa1	ENSMUST00000110538	ENSMUSP00000106167	TRANSLATION	protein_coding	-	-	5	296	0	0	0	278.6	7	-4,-6	-	-	0.414	MINOR
ENSMUSG00000027224	Duoxa1	ENSMUST00000155561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027224	Duoxa1	ENSMUST00000028653	ENSMUSP00000028653	TRANSLATION	protein_coding	-	CCDS16661.1	3	341	0	0	2.7	371.7	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000067818	Myl9	ENSMUST00000132985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067818	Myl9	ENSMUST00000145299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067818	Myl9	ENSMUST00000131622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067818	Myl9	ENSMUST00000088552	ENSMUSP00000085913	TRANSLATION	protein_coding	-	CCDS50779.1	1	172	7	3	21.5	49.2	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000027010	Slc25a12	ENSMUST00000184169	ENSMUSP00000139371	TRANSLATION	nonsense_mediated_decay	-	-	5	87	4	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027010	Slc25a12	ENSMUST00000151937	ENSMUSP00000122103	TRANSLATION	protein_coding	-	CCDS16113.1	1	677	8	11.645	7.8	232.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000027010	Slc25a12	ENSMUST00000147553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027010	Slc25a12	ENSMUST00000126493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027010	Slc25a12	ENSMUST00000130715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027010	Slc25a12	ENSMUST00000137916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027010	Slc25a12	ENSMUST00000146653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096764	Gm21985	ENSMUST00000141047	ENSMUSP00000124314	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	1106	0	2.16	0	348.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000032802	Srxn1	ENSMUST00000041500	ENSMUSP00000046196	TRANSLATION	protein_coding	-	CCDS16877.2	1	155	11	2	1.5	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032802	Srxn1	ENSMUST00000137751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032802	Srxn1	ENSMUST00000128882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045684	Lcn6	ENSMUST00000059693	ENSMUSP00000055660	TRANSLATION	protein_coding	-	-	5	115	0	2.398	0	24.1	0	-4,-7	-	-	8.058	MINOR
ENSMUSG00000045684	Lcn6	ENSMUST00000114199	ENSMUSP00000109837	TRANSLATION	protein_coding	-	CCDS50535.1	1	181	0	3.198	0.5	39.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000045684	Lcn6	ENSMUST00000114197	ENSMUSP00000109835	TRANSLATION	protein_coding	-	-	1	179	0	2.2	0	24.1	0	-4,-7	-	-	7.662	MINOR
ENSMUSG00000045684	Lcn6	ENSMUST00000139441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075168	Olfr1099	ENSMUST00000099871	ENSMUSP00000097456	TRANSLATION	protein_coding	-	CCDS16272.1	-	312	0	0.2	5.1	181.8	5	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075168	Olfr1099	ENSMUST00000213456	ENSMUSP00000149528	TRANSLATION	protein_coding	-	CCDS16272.1	5	312	0	0.2	5.1	181.8	5	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074994	Qser1	ENSMUST00000231375	ENSMUSP00000155882	TRANSLATION	protein_coding	-	-	-	1788	0	0	0.5	78.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000074994	Qser1	ENSMUST00000238887	ENSMUSP00000159098	TRANSLATION	nonsense_mediated_decay	-	-	-	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074994	Qser1	ENSMUST00000117237	ENSMUSP00000114062	TRANSLATION	protein_coding	-	CCDS50653.1	5	1698	0	0	0.5	78.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036504	Phpt1	ENSMUST00000147096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036504	Phpt1	ENSMUST00000039156	ENSMUSP00000037417	TRANSLATION	protein_coding	-	CCDS15781.1	1	124	0	3	7.5	141.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027510	Rbm38	ENSMUST00000029014	ENSMUSP00000029014	TRANSLATION	protein_coding	-	CCDS17139.1	1	237	0	2.89	6.3	64	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027510	Rbm38	ENSMUST00000155512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027510	Rbm38	ENSMUST00000173997	ENSMUSP00000133464	TRANSLATION	protein_coding	stop	-	5	125	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027510	Rbm38	ENSMUST00000173979	ENSMUSP00000133681	TRANSLATION	protein_coding	start	-	3	29	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027510	Rbm38	ENSMUST00000173878	ENSMUSP00000133388	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	1.444	0	39.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027510	Rbm38	ENSMUST00000173393	ENSMUSP00000133816	TRANSLATION	protein_coding	-	CCDS17139.1	5	237	0	2.89	6.3	64	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027510	Rbm38	ENSMUST00000173720	ENSMUSP00000133757	TRANSLATION	nonsense_mediated_decay	start	-	5	108	0	1.874	0	54.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027510	Rbm38	ENSMUST00000130430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026932	Nacc2	ENSMUST00000152133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026932	Nacc2	ENSMUST00000149408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026932	Nacc2	ENSMUST00000140993	ENSMUSP00000120198	TRANSLATION	protein_coding	stop	-	2	85	0	1.75	0	55.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026932	Nacc2	ENSMUST00000133212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026932	Nacc2	ENSMUST00000114159	ENSMUSP00000109796	TRANSLATION	protein_coding	-	CCDS15796.1	1	586	0	2.5	2.7	118.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026932	Nacc2	ENSMUST00000128674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026932	Nacc2	ENSMUST00000126921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026932	Nacc2	ENSMUST00000028300	ENSMUSP00000028300	TRANSLATION	protein_coding	-	CCDS15796.1	1	586	0	2.5	2.7	118.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040383	Aqr	ENSMUST00000126701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000140441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000043160	ENSMUSP00000047157	TRANSLATION	protein_coding	-	CCDS16565.1	1	1481	14	31.25	0.5	1262	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000040383	Aqr	ENSMUST00000102543	ENSMUSP00000099602	TRANSLATION	protein_coding	-	CCDS71114.1	1	1400	14	29.55	0.5	1262	0	-4,-6	-	-	14.598	MINOR
ENSMUSG00000040383	Aqr	ENSMUST00000125460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000147191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000131785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000129504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040383	Aqr	ENSMUST00000154317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017760	Ctsa	ENSMUST00000103093	ENSMUSP00000099382	TRANSLATION	protein_coding	-	CCDS17062.1	1	474	10	12.26	0.5	459.7	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000017760	Ctsa	ENSMUST00000143780	ENSMUSP00000123413	TRANSLATION	protein_coding	start/stop	-	3	219	4	5.08	0	194.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000017760	Ctsa	ENSMUST00000144580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000155061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000127650	ENSMUSP00000115514	TRANSLATION	protein_coding	stop	-	5	215	7	5	0	260	0	4,-1	-	-	-1	MINOR
ENSMUSG00000017760	Ctsa	ENSMUST00000130959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000128596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000152721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017760	Ctsa	ENSMUST00000133077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000143293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017760	Ctsa	ENSMUST00000140213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000146525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017760	Ctsa	ENSMUST00000151493	ENSMUSP00000116210	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017760	Ctsa	ENSMUST00000103092	ENSMUSP00000099381	TRANSLATION	protein_coding	-	CCDS17061.1	5	492	10	12.26	2.7	459.7	0	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000017760	Ctsa	ENSMUST00000147883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017760	Ctsa	ENSMUST00000133502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061342	Olfr1168	ENSMUST00000079599	ENSMUSP00000078549	TRANSLATION	protein_coding	-	CCDS16328.1	-	312	0	0.2	0.5	160.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061342	Olfr1168	ENSMUST00000215996	ENSMUSP00000149517	TRANSLATION	protein_coding	-	CCDS16328.1	3	312	0	0.2	0.5	160.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038383	Pigu	ENSMUST00000139854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038383	Pigu	ENSMUST00000077626	ENSMUSP00000076816	TRANSLATION	protein_coding	-	CCDS16946.1	1	435	0	0	2.8	389.2	4	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000038383	Pigu	ENSMUST00000125334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038383	Pigu	ENSMUST00000124419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038383	Pigu	ENSMUST00000165234	ENSMUSP00000126236	TRANSLATION	protein_coding	-	-	5	434	0	0	1.3	382	4	1,-2	-	-	5.568	ALTERNATIVE:2
ENSMUSG00000026768	Itga8	ENSMUST00000172791	ENSMUSP00000134154	TRANSLATION	nonsense_mediated_decay	-	-	1	590	16	11.95	0	144.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000026768	Itga8	ENSMUST00000130548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026768	Itga8	ENSMUST00000172716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026768	Itga8	ENSMUST00000148055	ENSMUSP00000134238	TRANSLATION	protein_coding	start	-	5	133	0	2.2	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000026768	Itga8	ENSMUST00000129370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026768	Itga8	ENSMUST00000141477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026768	Itga8	ENSMUST00000028106	ENSMUSP00000028106	TRANSLATION	protein_coding	-	CCDS15689.1	1	1062	23	21.64	5.1	501.7	1	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000095824	Gm13697	ENSMUST00000099948	ENSMUSP00000097531	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095824	Gm13697	ENSMUST00000179552	ENSMUSP00000135969	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042410	Agps	ENSMUST00000047232	ENSMUSP00000041967	TRANSLATION	protein_coding	-	CCDS16151.2	1	671	30	17.66	0.5	335	0	-4,-7	-	-	17.958	PRINCIPAL:2
ENSMUSG00000042410	Agps	ENSMUST00000175646	ENSMUSP00000135457	TRANSLATION	protein_coding	-	-	5	568	30	16.66	3.6	335.7	0	-4,-5	-	-	17.002	ALTERNATIVE:2
ENSMUSG00000042410	Agps	ENSMUST00000111952	ENSMUSP00000107583	TRANSLATION	protein_coding	-	-	2	508	30	12.33	0	201.1	0	-4,-7	-	-	6	MINOR
ENSMUSG00000042410	Agps	ENSMUST00000176056	ENSMUSP00000134773	TRANSLATION	protein_coding	start	-	3	57	5	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042410	Agps	ENSMUST00000176973	ENSMUSP00000134806	TRANSLATION	nonsense_mediated_decay	start	-	2	24	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042410	Agps	ENSMUST00000176626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042410	Agps	ENSMUST00000177204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054580	Pla2r1	ENSMUST00000126327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054580	Pla2r1	ENSMUST00000150373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054580	Pla2r1	ENSMUST00000128208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054580	Pla2r1	ENSMUST00000112525	ENSMUSP00000108144	TRANSLATION	protein_coding	-	CCDS16059.1	1	1487	9	10.645	0.5	501.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000054580	Pla2r1	ENSMUST00000134583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054580	Pla2r1	ENSMUST00000136034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068008	Bpifb3	ENSMUST00000109760	ENSMUSP00000105382	TRANSLATION	protein_coding	-	CCDS16921.1	5	473	0	5.466	2.7	188.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000068008	Bpifb3	ENSMUST00000088950	ENSMUSP00000086342	TRANSLATION	protein_coding	-	CCDS16921.1	1	473	0	5.466	2.7	188.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026939	Tmem141	ENSMUST00000136952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026939	Tmem141	ENSMUST00000142087	ENSMUSP00000121862	TRANSLATION	protein_coding	-	CCDS50534.1	1	108	0	3	6.3	140.8	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026939	Tmem141	ENSMUST00000128149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026939	Tmem141	ENSMUST00000155893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026939	Tmem141	ENSMUST00000028308	ENSMUSP00000028308	TRANSLATION	protein_coding	start	-	3	106	0	3	5.1	128.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000026939	Tmem141	ENSMUST00000150165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026939	Tmem141	ENSMUST00000132348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075218	Olfr995	ENSMUST00000216933	ENSMUSP00000149952	TRANSLATION	protein_coding	-	CCDS16208.1	5	315	0	0.3	1.5	169.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075218	Olfr995	ENSMUST00000099924	ENSMUSP00000097508	TRANSLATION	protein_coding	-	CCDS16208.1	-	315	0	0.3	1.5	169.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000108908	Olfr1293-ps	ENSMUST00000215245	ENSMUSP00000151131	TRANSLATION	nonsense_mediated_decay	-	-	5	326	0	0.66	1	155.6	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000108908	Olfr1293-ps	ENSMUST00000102551	ENSMUSP00000099611	TRANSLATION	protein_coding	start/stop	-	-	296	0	0.36	0	154.5	8	-3,-5	-	-	-1	MINOR
ENSMUSG00000108908	Olfr1293-ps	ENSMUST00000217845	ENSMUSP00000151814	TRANSLATION	protein_coding	-	-	5	326	0	0.66	1	155.6	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027335	Adra1d	ENSMUST00000103184	ENSMUSP00000099473	TRANSLATION	protein_coding	-	CCDS16764.1	1	562	0	0.8	1.5	258.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074764	Sel1l2	ENSMUST00000134475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074764	Sel1l2	ENSMUST00000122367	ENSMUSP00000113800	TRANSLATION	protein_coding	-	CCDS50732.1	1	688	0	6.575	1.5	172.3	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000074764	Sel1l2	ENSMUST00000120133	ENSMUSP00000112724	TRANSLATION	protein_coding	-	-	1	94	0	0	0	0	0	-2,-4	-	-	0	MINOR
ENSMUSG00000026755	Arpc5l	ENSMUST00000112862	ENSMUSP00000108483	TRANSLATION	protein_coding	-	CCDS38120.1	1	153	0	3.53	8.5	187.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026755	Arpc5l	ENSMUST00000135049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026755	Arpc5l	ENSMUST00000141467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026755	Arpc5l	ENSMUST00000090993	ENSMUSP00000088516	TRANSLATION	nonsense_mediated_decay	-	-	2	65	0	0.7	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026755	Arpc5l	ENSMUST00000204825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045624	Esf1	ENSMUST00000151317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045624	Esf1	ENSMUST00000141086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045624	Esf1	ENSMUST00000153769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045624	Esf1	ENSMUST00000137005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045624	Esf1	ENSMUST00000046030	ENSMUSP00000036523	TRANSLATION	protein_coding	-	CCDS38250.1	1	845	0	0	0.5	44.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027344	Fsip1	ENSMUST00000028821	ENSMUSP00000028821	TRANSLATION	protein_coding	-	CCDS16573.1	1	435	0	0	1.5	508.1	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000027344	Fsip1	ENSMUST00000231041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027344	Fsip1	ENSMUST00000231133	ENSMUSP00000155242	TRANSLATION	protein_coding	-	-	-	593	0	0	0	508.1	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000027344	Fsip1	ENSMUST00000028820	ENSMUSP00000028820	TRANSLATION	protein_coding	-	-	1	220	0	0	0	254	0	-4,-6	-	-	0	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000121237	ENSMUSP00000113923	TRANSLATION	protein_coding	-	-	3	158	0	0.28	0	0	0	-4,-5	-	-	0.522	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000110532	ENSMUSP00000106161	TRANSLATION	protein_coding	start	-	5	296	0	1.77	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000143484	ENSMUSP00000120732	TRANSLATION	protein_coding	start/stop	-	3	162	0	2.49	0	67.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000139819	ENSMUSP00000119980	TRANSLATION	protein_coding	start	-	5	320	0	3.02	0	67.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000125826	ENSMUSP00000117099	TRANSLATION	protein_coding	start	-	5	446	0	3.02	0	67.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000135848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033256	Shf	ENSMUST00000151130	ENSMUSP00000114524	TRANSLATION	protein_coding	start	-	5	364	0	0.28	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033256	Shf	ENSMUST00000110531	ENSMUSP00000106160	TRANSLATION	protein_coding	-	CCDS16662.1	5	238	0	3.02	1.7	67.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000033256	Shf	ENSMUST00000110530	ENSMUSP00000106159	TRANSLATION	protein_coding	-	-	5	232	0	3.02	0	67.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033256	Shf	ENSMUST00000048635	ENSMUSP00000045135	TRANSLATION	protein_coding	-	CCDS16662.1	1	238	0	3.02	1.7	67.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000062647	Rpl7a	ENSMUST00000129673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000143678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000136269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000147143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000137376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000149339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062647	Rpl7a	ENSMUST00000102898	ENSMUSP00000099962	TRANSLATION	protein_coding	-	CCDS15815.1	1	266	0	2	10	81.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075062	Olfr1271	ENSMUST00000217396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075062	Olfr1271	ENSMUST00000099751	ENSMUSP00000097340	TRANSLATION	protein_coding	-	CCDS16411.1	-	305	0	0.36	6.3	170.1	3	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075062	Olfr1271	ENSMUST00000216383	ENSMUSP00000149028	TRANSLATION	protein_coding	-	CCDS16411.1	3	305	0	0.36	6.3	170.1	3	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096703	Olfr1286	ENSMUST00000184954	ENSMUSP00000144852	TRANSLATION	protein_coding	-	CCDS16525.1	3	305	0	0.24	2.7	159.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096703	Olfr1286	ENSMUST00000099617	ENSMUSP00000097212	TRANSLATION	protein_coding	-	CCDS16525.1	-	305	0	0.24	2.7	159.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096703	Olfr1286	ENSMUST00000213210	ENSMUSP00000148932	TRANSLATION	protein_coding	-	CCDS16525.1	5	305	0	0.24	2.7	159.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005510	Ndufs3	ENSMUST00000123426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005510	Ndufs3	ENSMUST00000140248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005510	Ndufs3	ENSMUST00000139400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005510	Ndufs3	ENSMUST00000152059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005510	Ndufs3	ENSMUST00000005647	ENSMUSP00000005647	TRANSLATION	protein_coding	-	CCDS16418.1	1	263	0	5.9	3.9	146.5	0	-2,2	-	-	13	PRINCIPAL:1
ENSMUSG00000005510	Ndufs3	ENSMUST00000144683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026926	Pmpca	ENSMUST00000076431	ENSMUSP00000075762	TRANSLATION	protein_coding	-	CCDS15804.1	1	524	1	7.92	3.9	291.5	0	-2,1	-	-	13	PRINCIPAL:1
ENSMUSG00000026926	Pmpca	ENSMUST00000137686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026926	Pmpca	ENSMUST00000139535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026926	Pmpca	ENSMUST00000114093	ENSMUSP00000109727	TRANSLATION	protein_coding	-	-	1	441	1	6.52	0	280.7	0	-2,1	-	-	8.55	MINOR
ENSMUSG00000026926	Pmpca	ENSMUST00000134871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026926	Pmpca	ENSMUST00000135155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000028990	ENSMUSP00000028990	TRANSLATION	protein_coding	-	CCDS16931.1	1	588	0	4.98	1.5	247.1	0	0,3	-	-	12	PRINCIPAL:1
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000109731	ENSMUSP00000105353	TRANSLATION	protein_coding	-	CCDS16931.1	5	588	0	4.98	1.5	247.1	0	0,3	-	-	12	PRINCIPAL:1
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000150308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000109730	ENSMUSP00000105352	TRANSLATION	protein_coding	-	-	1	190	0	1.1	0	77.4	0	0,3	-	-	0	MINOR
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000152180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000137918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027487	Cdk5rap1	ENSMUST00000148289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034552	Zswim2	ENSMUST00000038223	ENSMUSP00000044913	TRANSLATION	protein_coding	-	CCDS16183.1	1	631	23	2.75	1.5	69.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034552	Zswim2	ENSMUST00000155127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034552	Zswim2	ENSMUST00000152829	ENSMUSP00000119439	TRANSLATION	protein_coding	stop	-	1	392	19	2.75	0	31	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027404	Snrpb	ENSMUST00000103199	ENSMUSP00000099488	TRANSLATION	protein_coding	-	CCDS16735.1	1	231	5	5	6.3	70.9	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000027404	Snrpb	ENSMUST00000150835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027404	Snrpb	ENSMUST00000147570	ENSMUSP00000143633	TRANSLATION	nonsense_mediated_decay	-	-	5	70	2	1.2	0	53.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027404	Snrpb	ENSMUST00000139225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000159373	ENSMUSP00000124080	TRANSLATION	protein_coding	start/stop	-	3	135	0	1.8	0	81.6	0	0,-4	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000028890	ENSMUSP00000028890	TRANSLATION	protein_coding	start	-	2	296	0	1.53	0	80.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000136621	ENSMUSP00000124616	TRANSLATION	protein_coding	-	-	5	261	0	1.92	0	130.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000133351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000138163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000150745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000160976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000103198	ENSMUSP00000099487	TRANSLATION	protein_coding	-	CCDS16737.1	1	580	0	5.25	0.5	359.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027405	Nop56	ENSMUST00000161543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000161025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000160183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000149955	ENSMUSP00000123879	TRANSLATION	nonsense_mediated_decay	start	-	3	125	0	2.1	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000143547	ENSMUSP00000124228	TRANSLATION	nonsense_mediated_decay	start	-	3	18	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000146454	ENSMUSP00000125304	TRANSLATION	protein_coding	start	-	5	222	0	3.33	0	210.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000153353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000162063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027405	Nop56	ENSMUST00000141872	ENSMUSP00000125305	TRANSLATION	protein_coding	start/stop	-	3	173	0	0	0	66.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000150401	ENSMUSP00000123890	TRANSLATION	nonsense_mediated_decay	start	-	5	173	0	1.53	0	80.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027405	Nop56	ENSMUST00000145335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026879	Gsn	ENSMUST00000124323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026879	Gsn	ENSMUST00000028239	ENSMUSP00000028239	TRANSLATION	protein_coding	-	CCDS15960.1	1	780	25	17.3	1.5	351.8	0	4,-1	-	-	18.159	MINOR
ENSMUSG00000026879	Gsn	ENSMUST00000142324	ENSMUSP00000118120	TRANSLATION	protein_coding	stop	-	5	251	9	5.5	0	134.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026879	Gsn	ENSMUST00000139867	ENSMUSP00000144217	TRANSLATION	protein_coding	stop	-	5	166	5	3	0	63	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026879	Gsn	ENSMUST00000202899	ENSMUSP00000144470	TRANSLATION	protein_coding	stop	-	3	251	9	5.5	0	134.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026879	Gsn	ENSMUST00000201185	ENSMUSP00000144561	TRANSLATION	protein_coding	-	CCDS79785.1	1	731	25	16.5	10.4	351.8	0	-4,-5	-	-	19.398	PRINCIPAL:1
ENSMUSG00000026879	Gsn	ENSMUST00000202990	ENSMUSP00000144296	TRANSLATION	protein_coding	stop	-	5	568	21	12	0	256	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074569	Gcnt7	ENSMUST00000161334	ENSMUSP00000125368	TRANSLATION	protein_coding	start	-	1	348	0	1.2	0	122.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074569	Gcnt7	ENSMUST00000099060	ENSMUSP00000096659	TRANSLATION	protein_coding	-	CCDS17133.1	1	433	0	1.44	1.5	128.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055632	Hmcn2	ENSMUST00000226996	ENSMUSP00000154649	TRANSLATION	nonsense_mediated_decay	-	-	-	1449	0	14.33	0	469.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000055632	Hmcn2	ENSMUST00000141294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055632	Hmcn2	ENSMUST00000142448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055632	Hmcn2	ENSMUST00000130375	ENSMUSP00000118076	TRANSLATION	protein_coding	start/stop	-	5	236	0	3.368	0	107.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000055632	Hmcn2	ENSMUST00000138821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055632	Hmcn2	ENSMUST00000113532	ENSMUSP00000109160	TRANSLATION	protein_coding	-	-	5	5100	0	54.781	0	2446	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078866	Zfp970	ENSMUST00000099002	ENSMUSP00000096600	TRANSLATION	protein_coding	-	-	2	76	0	1.45	0	73.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078866	Zfp970	ENSMUST00000108952	ENSMUSP00000104580	TRANSLATION	protein_coding	-	CCDS50831.1	2	522	62	2.05	0.5	381.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027490	E2f1	ENSMUST00000103145	ENSMUSP00000099434	TRANSLATION	protein_coding	-	CCDS16935.1	1	430	0	3.6	1.5	202.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000027490	E2f1	ENSMUST00000000894	ENSMUSP00000000894	TRANSLATION	protein_coding	-	CCDS71165.1	1	385	0	3.6	0.5	202.1	0	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027195	Hsd17b12	ENSMUST00000028619	ENSMUSP00000028619	TRANSLATION	protein_coding	-	CCDS16458.1	1	312	27	5.26	6.3	152.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000027195	Hsd17b12	ENSMUST00000145967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027195	Hsd17b12	ENSMUST00000127084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027195	Hsd17b12	ENSMUST00000146580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027195	Hsd17b12	ENSMUST00000141955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058740	Kcnt1	ENSMUST00000198204	ENSMUSP00000142870	TRANSLATION	protein_coding	-	-	5	1183	0	25.885	1.5	142.3	5	-4,-5	-	-	9.882	MINOR
ENSMUSG00000058740	Kcnt1	ENSMUST00000037580	ENSMUSP00000039058	TRANSLATION	protein_coding	-	CCDS15794.1	1	1238	0	26.57	1.5	142.3	5	-4,-5	-	-	11.25	PRINCIPAL:2
ENSMUSG00000058740	Kcnt1	ENSMUST00000145544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000114172	ENSMUSP00000109809	TRANSLATION	protein_coding	-	CCDS79757.1	1	1224	0	26.07	1.5	142.3	5	-4,-7	-	-	10.248	MINOR
ENSMUSG00000058740	Kcnt1	ENSMUST00000114170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000128502	ENSMUSP00000143472	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	1	0	41.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058740	Kcnt1	ENSMUST00000150788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000199269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000171268	ENSMUSP00000132212	TRANSLATION	protein_coding	-	CCDS50537.1	1	1218	0	26.01	1.5	142.3	5	-4,-5	-	-	10.128	MINOR
ENSMUSG00000058740	Kcnt1	ENSMUST00000138568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000153001	ENSMUSP00000142532	TRANSLATION	protein_coding	start/stop	-	5	330	0	8.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058740	Kcnt1	ENSMUST00000131529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058740	Kcnt1	ENSMUST00000197917	ENSMUSP00000143106	TRANSLATION	protein_coding	-	-	5	1236	0	26.57	1.5	142.3	5	-4,-5	-	-	11.25	ALTERNATIVE:2
ENSMUSG00000058740	Kcnt1	ENSMUST00000114176	ENSMUSP00000109813	TRANSLATION	protein_coding	-	-	5	1217	0	26.945	1.5	142.3	5	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000058740	Kcnt1	ENSMUST00000200434	ENSMUSP00000143482	TRANSLATION	protein_coding	-	-	5	1202	0	25.51	1	142.3	5	-4,-5	-	-	9.132	MINOR
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000155202	ENSMUSP00000116220	TRANSLATION	protein_coding	start/stop	-	3	192	0	1	0	24.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000137526	ENSMUSP00000118371	TRANSLATION	protein_coding	start	-	3	299	8	3.7	0	160.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000154487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000109724	ENSMUSP00000105346	TRANSLATION	protein_coding	stop	-	3	221	0	3.08	0	119.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000139506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000099178	ENSMUSP00000096782	TRANSLATION	protein_coding	-	-	1	473	0	4.83	0	248.3	0	-4,-7	-	-	5.802	MINOR
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000109725	ENSMUSP00000105347	TRANSLATION	protein_coding	-	CCDS50764.1	1	593	8	6.78	7.5	279.9	0	-4,-7	-	-	20.598	ALTERNATIVE:1
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000135647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038533	Cbfa2t2	ENSMUST00000045270	ENSMUSP00000043087	TRANSLATION	protein_coding	-	CCDS16932.1	1	594	8	6.98	7.5	279.9	0	-4,-7	-	-	21	PRINCIPAL:3
ENSMUSG00000042604	Kcna4	ENSMUST00000037012	ENSMUSP00000037958	TRANSLATION	protein_coding	-	CCDS16505.1	1	654	0	1	5.1	396.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000042604	Kcna4	ENSMUST00000173191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026828	Galnt5	ENSMUST00000112616	ENSMUSP00000108235	TRANSLATION	protein_coding	-	CCDS38125.1	1	930	23	6.63	1.5	149.7	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026828	Galnt5	ENSMUST00000144671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026828	Galnt5	ENSMUST00000166729	ENSMUSP00000131362	TRANSLATION	protein_coding	-	CCDS38125.1	2	930	23	6.63	1.5	149.7	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000075201	Olfr1043	ENSMUST00000099907	ENSMUSP00000097491	TRANSLATION	protein_coding	-	CCDS16241.1	-	314	0	0.2	1.5	155.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075201	Olfr1043	ENSMUST00000216028	ENSMUSP00000149716	TRANSLATION	protein_coding	-	CCDS16241.1	5	314	0	0.2	1.5	155.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075201	Olfr1043	ENSMUST00000213886	ENSMUSP00000150839	TRANSLATION	protein_coding	-	CCDS16241.1	5	314	0	0.2	1.5	155.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075201	Olfr1043	ENSMUST00000213949	ENSMUSP00000149713	TRANSLATION	protein_coding	-	CCDS16241.1	5	314	0	0.2	1.5	155.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000110819	Olfr1252	ENSMUST00000186710	ENSMUSP00000140045	TRANSLATION	protein_coding	-	CCDS16391.1	-	314	0	0.42	2.7	165.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000110819	Olfr1252	ENSMUST00000213196	ENSMUSP00000151036	TRANSLATION	protein_coding	-	CCDS16391.1	5	314	0	0.42	2.7	165.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000110819	Olfr1252	ENSMUST00000216203	ENSMUSP00000150304	TRANSLATION	protein_coding	-	CCDS16391.1	3	314	0	0.42	2.7	165.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015627	Gata5	ENSMUST00000015771	ENSMUSP00000015771	TRANSLATION	protein_coding	-	CCDS17175.1	1	404	8	3	1.5	293.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000051329	Nup160	ENSMUST00000057481	ENSMUSP00000059289	TRANSLATION	protein_coding	-	CCDS16413.1	1	1402	0	33.75	1.7	431.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051329	Nup160	ENSMUST00000145669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051329	Nup160	ENSMUST00000136739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051329	Nup160	ENSMUST00000154036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051329	Nup160	ENSMUST00000130629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051329	Nup160	ENSMUST00000126503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051329	Nup160	ENSMUST00000132595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068809	Olfr1188	ENSMUST00000217131	ENSMUSP00000150850	TRANSLATION	protein_coding	-	-	3	301	0	0.42	0	163.7	7	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068809	Olfr1188	ENSMUST00000090701	ENSMUSP00000088202	TRANSLATION	protein_coding	-	CCDS16340.1	-	312	0	0.42	0.5	163.7	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000111590	Olfr1192-ps1	ENSMUST00000216512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111590	Olfr1192-ps1	ENSMUST00000120518	ENSMUSP00000149414	TRANSLATION	protein_coding	-	-	-	309	0	0.2	4.6	150	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000111590	Olfr1192-ps1	ENSMUST00000217373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017664	Slc35c2	ENSMUST00000109300	ENSMUSP00000104923	TRANSLATION	protein_coding	-	CCDS17074.1	1	364	0	0	6.3	87.7	20	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000017664	Slc35c2	ENSMUST00000109298	ENSMUSP00000104921	TRANSLATION	protein_coding	-	CCDS17074.1	1	364	0	0	6.3	87.7	20	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000017664	Slc35c2	ENSMUST00000130393	ENSMUSP00000123450	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	5	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000129210	ENSMUSP00000118605	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	47.2	15	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000129336	ENSMUSP00000123299	TRANSLATION	protein_coding	stop	-	5	196	0	0	0	0	10	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000125550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017664	Slc35c2	ENSMUST00000017808	ENSMUSP00000017808	TRANSLATION	protein_coding	-	CCDS17074.1	1	364	0	0	6.3	87.7	20	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000017664	Slc35c2	ENSMUST00000133961	ENSMUSP00000118227	TRANSLATION	protein_coding	stop	-	3	192	0	0	0	54.9	16	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000147247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017664	Slc35c2	ENSMUST00000131409	ENSMUSP00000120036	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	10	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000155289	ENSMUSP00000119071	TRANSLATION	protein_coding	stop	-	5	199	0	0	0	38	15	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000109299	ENSMUSP00000104922	TRANSLATION	protein_coding	-	CCDS17074.1	1	364	0	0	6.3	87.7	20	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000017664	Slc35c2	ENSMUST00000145301	ENSMUSP00000123757	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	4	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000154608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017664	Slc35c2	ENSMUST00000132270	ENSMUSP00000125708	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	0	0	0	4	0,-4	-	-	-1	MINOR
ENSMUSG00000017664	Slc35c2	ENSMUST00000156134	ENSMUSP00000116288	TRANSLATION	protein_coding	stop	-	2	192	0	0	0	54.9	16	0,-4	-	-	-1	MINOR
ENSMUSG00000027253	Lrp4	ENSMUST00000123897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027253	Lrp4	ENSMUST00000028689	ENSMUSP00000028689	TRANSLATION	protein_coding	-	CCDS16432.1	1	1905	50	23.79	5.1	1036.9	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000027253	Lrp4	ENSMUST00000143874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027253	Lrp4	ENSMUST00000151907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059910	Olfr1265	ENSMUST00000080311	ENSMUSP00000079190	TRANSLATION	protein_coding	-	CCDS16404.1	-	309	0	0.2	6.4	167	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059910	Olfr1265	ENSMUST00000214855	ENSMUSP00000149684	TRANSLATION	protein_coding	-	CCDS16404.1	5	309	0	0.2	6.4	167	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000036792	Mbd5	ENSMUST00000196831	ENSMUSP00000142821	TRANSLATION	protein_coding	start	-	5	77	0	0	0	25.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000147023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036792	Mbd5	ENSMUST00000196045	ENSMUSP00000143148	TRANSLATION	nonsense_mediated_decay	start	-	5	156	0	0	0	30.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000148796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036792	Mbd5	ENSMUST00000112754	ENSMUSP00000108374	TRANSLATION	protein_coding	-	CCDS71051.1	5	1498	0	0	2.9	30.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036792	Mbd5	ENSMUST00000197712	ENSMUSP00000143413	TRANSLATION	nonsense_mediated_decay	start	-	5	113	0	0	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000112745	ENSMUSP00000108365	TRANSLATION	protein_coding	-	-	1	856	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000154653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036792	Mbd5	ENSMUST00000047413	ENSMUSP00000036847	TRANSLATION	protein_coding	-	CCDS38122.1	1	1728	0	0	0.5	30.2	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000036792	Mbd5	ENSMUST00000132717	ENSMUSP00000137021	TRANSLATION	nonsense_mediated_decay	start	-	2	435	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000122841	ENSMUSP00000119317	TRANSLATION	protein_coding	start	-	1	1067	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000142250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036792	Mbd5	ENSMUST00000199257	ENSMUSP00000143060	TRANSLATION	protein_coding	start/stop	-	5	120	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036792	Mbd5	ENSMUST00000147055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036792	Mbd5	ENSMUST00000127085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075208	Olfr1019	ENSMUST00000102634	ENSMUSP00000099694	TRANSLATION	protein_coding	-	CCDS16223.1	-	310	0	0.28	6.4	184.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075208	Olfr1019	ENSMUST00000213515	ENSMUSP00000150622	TRANSLATION	protein_coding	-	CCDS16223.1	5	310	0	0.28	6.4	184.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051396	Gm45902	ENSMUST00000124331	ENSMUSP00000119850	TRANSLATION	protein_coding	-	-	1	361	0	0	1.5	59	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051396	Gm45902	ENSMUST00000140494	ENSMUSP00000120385	TRANSLATION	protein_coding	-	-	2	361	0	0	1.5	59	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027287	Snap23	ENSMUST00000028743	ENSMUSP00000028743	TRANSLATION	protein_coding	-	CCDS16622.1	1	210	0	5.15	17	84.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027287	Snap23	ENSMUST00000137144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027287	Snap23	ENSMUST00000147864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027287	Snap23	ENSMUST00000142278	ENSMUSP00000116935	TRANSLATION	protein_coding	stop	-	3	161	0	3.65	0	84.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027287	Snap23	ENSMUST00000110711	ENSMUSP00000106339	TRANSLATION	protein_coding	-	CCDS16622.1	1	210	0	5.15	17	84.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027287	Snap23	ENSMUST00000153580	ENSMUSP00000121509	TRANSLATION	protein_coding	stop	-	2	85	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027287	Snap23	ENSMUST00000150611	ENSMUSP00000119652	TRANSLATION	nonsense_mediated_decay	-	-	5	98	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027287	Snap23	ENSMUST00000116437	ENSMUSP00000112138	TRANSLATION	protein_coding	-	CCDS50681.1	1	221	0	5.15	4.2	73.8	0	-4,-5	-	-	12.05	MINOR
ENSMUSG00000027287	Snap23	ENSMUST00000130759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079039	Gm11037	ENSMUST00000110225	ENSMUSP00000105854	TRANSLATION	protein_coding	start/stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000002105	Slc39a13	ENSMUST00000141328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000153367	ENSMUSP00000118308	TRANSLATION	protein_coding	stop	-	3	138	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000002105	Slc39a13	ENSMUST00000073575	ENSMUSP00000073263	TRANSLATION	protein_coding	-	CCDS16424.1	1	361	0	0	6.3	181.7	8	0,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000002105	Slc39a13	ENSMUST00000150348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000111436	ENSMUSP00000107063	TRANSLATION	protein_coding	-	CCDS71095.1	1	374	0	0	0.5	178.9	8	0,-3	-	-	5.832	MINOR
ENSMUSG00000002105	Slc39a13	ENSMUST00000130252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000133047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000123685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000079976	ENSMUSP00000078892	TRANSLATION	protein_coding	-	-	1	160	0	0	0.5	136.8	4	-4,-5	-	-	3.306	MINOR
ENSMUSG00000002105	Slc39a13	ENSMUST00000149430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002105	Slc39a13	ENSMUST00000142943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014873	Surf2	ENSMUST00000126947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014873	Surf2	ENSMUST00000143098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014873	Surf2	ENSMUST00000125408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014873	Surf2	ENSMUST00000157066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014873	Surf2	ENSMUST00000135506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014873	Surf2	ENSMUST00000015017	ENSMUSP00000015017	TRANSLATION	protein_coding	-	CCDS15816.1	1	257	0	0	0.5	314.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034800	Zfp661	ENSMUST00000110366	ENSMUSP00000105995	TRANSLATION	protein_coding	-	CCDS16705.1	1	427	35	1.6	0.5	278.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034800	Zfp661	ENSMUST00000077422	ENSMUSP00000076637	TRANSLATION	protein_coding	-	CCDS16705.1	1	427	35	1.6	0.5	278.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034800	Zfp661	ENSMUST00000164551	ENSMUSP00000132820	TRANSLATION	protein_coding	-	CCDS16705.1	2	427	35	1.6	0.5	278.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034800	Zfp661	ENSMUST00000110368	ENSMUSP00000105997	TRANSLATION	protein_coding	-	CCDS16705.1	1	427	35	1.6	0.5	278.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027468	Defb22	ENSMUST00000028966	ENSMUSP00000028966	TRANSLATION	protein_coding	-	CCDS16887.1	1	179	0	0	0.5	34.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000075014	Gm10800	ENSMUST00000099683	ENSMUSP00000097275	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000075185	Olfr1061	ENSMUST00000099889	ENSMUSP00000097474	TRANSLATION	protein_coding	-	CCDS50626.1	-	313	0	0	2.9	173.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027381	Bcl2l11	ENSMUST00000146023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027381	Bcl2l11	ENSMUST00000103211	ENSMUSP00000099500	TRANSLATION	protein_coding	-	CCDS16712.1	2	110	0	1.6	3.9	150.4	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000027381	Bcl2l11	ENSMUST00000089634	ENSMUSP00000087062	TRANSLATION	protein_coding	-	CCDS71141.1	1	91	0	0	0.5	78	0	-4,-5	-	-	1.656	MINOR
ENSMUSG00000027381	Bcl2l11	ENSMUST00000019281	ENSMUSP00000019281	TRANSLATION	protein_coding	-	CCDS16712.1	1	110	0	1.6	3.9	150.4	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000027381	Bcl2l11	ENSMUST00000132201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027381	Bcl2l11	ENSMUST00000103210	ENSMUSP00000099499	TRANSLATION	protein_coding	-	CCDS16714.1	1	140	0	1.6	3.9	150.4	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000027381	Bcl2l11	ENSMUST00000129206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027381	Bcl2l11	ENSMUST00000110341	ENSMUSP00000105970	TRANSLATION	protein_coding	-	CCDS16713.1	1	196	0	1.6	3.9	150.4	0	-4,-5	-	-	13	PRINCIPAL:4
ENSMUSG00000067996	Bpifb9b	ENSMUST00000088921	ENSMUSP00000086311	TRANSLATION	protein_coding	-	CCDS50762.1	1	591	0	0	0.5	33.8	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000036958	Cst11	ENSMUST00000028934	ENSMUSP00000028934	TRANSLATION	protein_coding	-	CCDS16845.1	1	139	0	1.56	5.1	51.5	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000045225	Olfr1152	ENSMUST00000051058	ENSMUSP00000054645	TRANSLATION	protein_coding	-	CCDS16313.1	-	310	0	0.2	7.5	156.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000045225	Olfr1152	ENSMUST00000213308	ENSMUSP00000151045	TRANSLATION	protein_coding	-	CCDS16313.1	5	310	0	0.2	7.5	156.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074884	Serf2	ENSMUST00000134412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074884	Serf2	ENSMUST00000110615	ENSMUSP00000106245	TRANSLATION	protein_coding	-	-	2	42	0	0	0	47.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000074884	Serf2	ENSMUST00000099475	ENSMUSP00000097074	TRANSLATION	protein_coding	-	CCDS71126.1	2	133	0	0	6.4	47.6	0	-4,-5	-	-	7.42	MINOR
ENSMUSG00000074884	Serf2	ENSMUST00000148575	ENSMUSP00000121895	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	47.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074884	Serf2	ENSMUST00000154418	ENSMUSP00000123257	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0	0	47.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074884	Serf2	ENSMUST00000139253	ENSMUSP00000123181	TRANSLATION	protein_coding	-	CCDS16645.1	1	59	0	0	16.2	47.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000075419	Dolk	ENSMUST00000100219	ENSMUSP00000097792	TRANSLATION	protein_coding	-	CCDS15877.1	-	534	0	0	0.5	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000075211	Olfr1006	ENSMUST00000216084	ENSMUSP00000149868	TRANSLATION	protein_coding	-	CCDS38169.1	5	312	0	0.36	6.4	172.4	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075211	Olfr1006	ENSMUST00000099917	ENSMUSP00000097501	TRANSLATION	protein_coding	-	CCDS38169.1	2	312	0	0.36	6.4	172.4	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000044647	Csrnp3	ENSMUST00000122912	ENSMUSP00000117533	TRANSLATION	protein_coding	-	CCDS16074.2	1	597	8	0	1.5	345.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000044647	Csrnp3	ENSMUST00000176109	ENSMUSP00000135019	TRANSLATION	protein_coding	-	CCDS71060.1	5	585	8	0	2.9	345.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044647	Csrnp3	ENSMUST00000139896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044647	Csrnp3	ENSMUST00000129133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044647	Csrnp3	ENSMUST00000112397	ENSMUSP00000135151	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044647	Csrnp3	ENSMUST00000112394	ENSMUSP00000108013	TRANSLATION	protein_coding	-	CCDS71060.1	1	585	8	0	2.9	345.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044647	Csrnp3	ENSMUST00000053910	ENSMUSP00000055719	TRANSLATION	protein_coding	-	CCDS16074.2	1	597	8	0	1.5	345.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000044647	Csrnp3	ENSMUST00000145598	ENSMUSP00000135605	TRANSLATION	protein_coding	-	CCDS71060.1	1	585	8	0	2.9	345.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074656	Eif2s2	ENSMUST00000147136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074656	Eif2s2	ENSMUST00000099173	ENSMUSP00000096777	TRANSLATION	protein_coding	-	CCDS38292.1	1	331	4	4.19	12.8	140.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000074656	Eif2s2	ENSMUST00000166171	ENSMUSP00000128257	TRANSLATION	protein_coding	-	CCDS38292.1	1	331	4	4.19	12.8	140.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000074656	Eif2s2	ENSMUST00000135524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074656	Eif2s2	ENSMUST00000161172	ENSMUSP00000125248	TRANSLATION	protein_coding	stop	-	2	118	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000111567	Olfr1251	ENSMUST00000214750	ENSMUSP00000150028	TRANSLATION	protein_coding	-	CCDS16390.1	-	318	0	0.42	1.5	154.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111567	Olfr1251	ENSMUST00000214304	ENSMUSP00000149873	TRANSLATION	protein_coding	-	CCDS16390.1	5	318	0	0.42	1.5	154.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111567	Olfr1251	ENSMUST00000214639	ENSMUSP00000149580	TRANSLATION	protein_coding	-	CCDS16390.1	5	318	0	0.42	1.5	154.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038980	Rbbp8nl	ENSMUST00000038529	ENSMUSP00000047237	TRANSLATION	protein_coding	-	CCDS17174.1	1	614	0	0	0.5	175	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000001403	Ube2c	ENSMUST00000088248	ENSMUSP00000085581	TRANSLATION	protein_coding	-	CCDS17055.1	1	179	0	4.33	13	153.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000001403	Ube2c	ENSMUST00000001439	ENSMUSP00000001439	TRANSLATION	protein_coding	-	-	1	171	0	3.83	0	149.6	0	-4,-7	-	-	10.788	MINOR
ENSMUSG00000039263	Npepl1	ENSMUST00000136449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039263	Npepl1	ENSMUST00000125502	ENSMUSP00000133202	TRANSLATION	nonsense_mediated_decay	start	-	3	210	3	3.63	0	82.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039263	Npepl1	ENSMUST00000153957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039263	Npepl1	ENSMUST00000044415	ENSMUSP00000042808	TRANSLATION	protein_coding	-	CCDS17148.1	1	524	11	9.13	12.8	335.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000075120	Olfr1196	ENSMUST00000216977	ENSMUSP00000149902	TRANSLATION	protein_coding	-	CCDS16344.2	5	314	0	0.2	0.5	158.5	6	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075120	Olfr1196	ENSMUST00000104892	ENSMUSP00000100488	TRANSLATION	protein_coding	-	CCDS16344.2	-	314	0	0.2	0.5	158.5	6	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075120	Olfr1196	ENSMUST00000216928	ENSMUSP00000149100	TRANSLATION	protein_coding	-	CCDS16344.2	5	314	0	0.2	0.5	158.5	6	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027446	Cstdc2	ENSMUST00000028937	ENSMUSP00000028937	TRANSLATION	protein_coding	-	CCDS16851.1	1	133	0	1.44	1.5	36	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027446	Cstdc2	ENSMUST00000149457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057149	Olfr1301	ENSMUST00000080094	ENSMUSP00000078993	TRANSLATION	protein_coding	-	CCDS16532.1	-	312	0	0.42	1.5	179	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057149	Olfr1301	ENSMUST00000207590	ENSMUSP00000146530	TRANSLATION	protein_coding	-	CCDS16532.1	2	312	0	0.42	1.5	179	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033368	Trim69	ENSMUST00000143088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033368	Trim69	ENSMUST00000036089	ENSMUSP00000047627	TRANSLATION	protein_coding	-	CCDS16655.1	1	500	12	4.73	5.1	171.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000047969	Olfr1093	ENSMUST00000219561	ENSMUSP00000151453	TRANSLATION	protein_coding	-	CCDS16268.1	5	322	0	0	1.5	166.7	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047969	Olfr1093	ENSMUST00000213354	ENSMUSP00000149944	TRANSLATION	protein_coding	-	CCDS16268.1	3	322	0	0	1.5	166.7	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047969	Olfr1093	ENSMUST00000055273	ENSMUSP00000049733	TRANSLATION	protein_coding	-	CCDS16268.1	-	322	0	0	1.5	166.7	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038990	Cables2	ENSMUST00000108891	ENSMUSP00000104519	TRANSLATION	protein_coding	-	CCDS38377.1	1	476	0	0	0.5	32.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038990	Cables2	ENSMUST00000135301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038990	Cables2	ENSMUST00000136706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038990	Cables2	ENSMUST00000126688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038990	Cables2	ENSMUST00000141067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026784	Pdss1	ENSMUST00000053729	ENSMUSP00000055689	TRANSLATION	protein_coding	-	CCDS38057.1	1	409	29	7.504	1.7	239.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000026784	Pdss1	ENSMUST00000149229	ENSMUSP00000114242	TRANSLATION	nonsense_mediated_decay	start	-	3	44	0	0.45	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026784	Pdss1	ENSMUST00000135621	ENSMUSP00000116089	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026784	Pdss1	ENSMUST00000139472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026784	Pdss1	ENSMUST00000152170	ENSMUSP00000121873	TRANSLATION	protein_coding	-	-	1	280	21	4.702	0	161.5	0	-4,0	-	-	2.364	MINOR
ENSMUSG00000026784	Pdss1	ENSMUST00000148072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026784	Pdss1	ENSMUST00000141215	ENSMUSP00000116206	TRANSLATION	protein_coding	stop	-	3	75	0	0.864	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051154	Commd3	ENSMUST00000150590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000061158	ENSMUSP00000049882	TRANSLATION	protein_coding	-	CCDS15710.1	1	195	0	0	13	67.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000051154	Commd3	ENSMUST00000137817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000133828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000154519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000133685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000137317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000171845	ENSMUSP00000127385	TRANSLATION	protein_coding	-	CCDS15710.1	5	195	0	0	13	67.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000051154	Commd3	ENSMUST00000130537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000151230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000131369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051154	Commd3	ENSMUST00000151974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036401	Glt6d1	ENSMUST00000130316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036401	Glt6d1	ENSMUST00000038010	ENSMUSP00000048642	TRANSLATION	protein_coding	-	CCDS15791.1	1	311	18	2.5	0.5	328	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000068819	Olfr1131	ENSMUST00000216756	ENSMUSP00000148881	TRANSLATION	protein_coding	-	-	3	193	0	0.24	0	100.9	4	-4,-7	-	-	4.698	MINOR
ENSMUSG00000068819	Olfr1131	ENSMUST00000213302	ENSMUSP00000150754	TRANSLATION	protein_coding	-	CCDS16298.1	5	309	0	0.66	3.9	159	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068819	Olfr1131	ENSMUST00000090712	ENSMUSP00000088214	TRANSLATION	protein_coding	-	CCDS16298.1	-	309	0	0.66	3.9	159	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000058793	Cds2	ENSMUST00000110158	ENSMUSP00000105786	TRANSLATION	protein_coding	-	CCDS79850.1	1	129	0	0	0.5	39.9	6	-4,-5	-	-	0	MINOR
ENSMUSG00000058793	Cds2	ENSMUST00000103181	ENSMUSP00000099470	TRANSLATION	protein_coding	-	CCDS16772.1	1	444	0	1.81	6.3	293.4	12	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058793	Cds2	ENSMUST00000125060	ENSMUSP00000135710	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000058793	Cds2	ENSMUST00000147456	ENSMUSP00000135497	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058793	Cds2	ENSMUST00000089461	ENSMUSP00000086886	TRANSLATION	protein_coding	-	CCDS71150.1	1	427	0	1.81	0.5	293.4	12	-4,-6	-	-	12	MINOR
ENSMUSG00000058793	Cds2	ENSMUST00000138194	ENSMUSP00000121769	TRANSLATION	protein_coding	start	-	5	194	0	1.2	0	108.6	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000016257	Prelid3b	ENSMUST00000141100	ENSMUSP00000115566	TRANSLATION	protein_coding	stop	-	3	31	0	1	0	37.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016257	Prelid3b	ENSMUST00000117442	ENSMUSP00000112686	TRANSLATION	protein_coding	-	-	3	105	0	2.48	0	86.9	0	-4,-5	-	-	0.18	MINOR
ENSMUSG00000016257	Prelid3b	ENSMUST00000016401	ENSMUSP00000016401	TRANSLATION	protein_coding	-	CCDS17155.1	1	195	0	5.39	6.5	192.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000016257	Prelid3b	ENSMUST00000120822	ENSMUSP00000113522	TRANSLATION	protein_coding	-	-	3	105	0	2.48	0	86.9	0	-4,-5	-	-	0.18	MINOR
ENSMUSG00000016257	Prelid3b	ENSMUST00000147944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075380	Olfr355	ENSMUST00000213574	ENSMUSP00000151206	TRANSLATION	protein_coding	-	CCDS15988.1	5	310	0	0.42	6.3	186.1	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075380	Olfr355	ENSMUST00000100147	ENSMUSP00000097725	TRANSLATION	protein_coding	-	CCDS15988.1	-	310	0	0.42	6.3	186.1	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027202	Slc12a1	ENSMUST00000110494	ENSMUSP00000106120	TRANSLATION	protein_coding	-	-	5	1090	0	1.94	0	1083.2	9	-4,-2	-	-	11.58	ALTERNATIVE:2
ENSMUSG00000027202	Slc12a1	ENSMUST00000110495	ENSMUSP00000106121	TRANSLATION	protein_coding	-	CCDS50694.1	5	1090	0	1.94	0	1083.6	9	-4,-2	-	-	11.604	ALTERNATIVE:2
ENSMUSG00000027202	Slc12a1	ENSMUST00000028630	ENSMUSP00000028630	TRANSLATION	protein_coding	-	CCDS50693.1	1	1090	0	1.94	0	1090.2	8	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000027202	Slc12a1	ENSMUST00000147095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017764	Zswim1	ENSMUST00000017908	ENSMUSP00000017908	TRANSLATION	protein_coding	-	CCDS17059.1	1	455	0	0	1.5	28.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000017764	Zswim1	ENSMUST00000132282	ENSMUSP00000120356	TRANSLATION	protein_coding	stop	-	3	146	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000075115	Olfr1200	ENSMUST00000099811	ENSMUSP00000097399	TRANSLATION	protein_coding	-	CCDS16348.1	-	336	0	0.24	0.5	157.8	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075115	Olfr1200	ENSMUST00000217588	ENSMUSP00000149757	TRANSLATION	protein_coding	-	CCDS16348.1	5	336	0	0.24	0.5	157.8	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000090996	Gm20458	ENSMUST00000164863	ENSMUSP00000126658	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	78	0	0	2.4	65.8	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000032864	Rag2	ENSMUST00000044031	ENSMUSP00000038204	TRANSLATION	protein_coding	-	CCDS16462.1	1	527	9	1	6.3	787.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000032864	Rag2	ENSMUST00000111227	ENSMUSP00000106858	TRANSLATION	protein_coding	-	CCDS16462.1	1	527	9	1	6.3	787.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000060257	Scrt2	ENSMUST00000064061	ENSMUSP00000066280	TRANSLATION	protein_coding	-	CCDS50750.1	5	311	19	0.6	0.5	75.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027167	Elp4	ENSMUST00000152272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027167	Elp4	ENSMUST00000148441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027167	Elp4	ENSMUST00000028588	ENSMUSP00000028588	TRANSLATION	protein_coding	start/stop	-	5	278	0	1.395	0	228.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027167	Elp4	ENSMUST00000122965	ENSMUSP00000116575	TRANSLATION	protein_coding	-	CCDS16500.1	1	422	0	2.225	0.5	374.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027322	Siglec1	ENSMUST00000028794	ENSMUSP00000028794	TRANSLATION	protein_coding	-	CCDS16754.2	1	1701	0	8.22	0.5	446.5	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000027322	Siglec1	ENSMUST00000110226	ENSMUSP00000105855	TRANSLATION	protein_coding	-	-	1	346	0	2.87	0	146.6	0	1,-3	-	-	0	MINOR
ENSMUSG00000027322	Siglec1	ENSMUST00000110227	ENSMUSP00000105856	TRANSLATION	protein_coding	-	-	1	1605	0	7.62	0	446.5	0	1,-3	-	-	10.8	MINOR
ENSMUSG00000049401	Ogfr	ENSMUST00000029087	ENSMUSP00000029087	TRANSLATION	protein_coding	-	CCDS17179.1	1	633	0	0	0.5	360.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049401	Ogfr	ENSMUST00000147070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023330	Dtwd1	ENSMUST00000110437	ENSMUSP00000106067	TRANSLATION	protein_coding	-	CCDS16682.1	1	304	0	0	0.5	150	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023330	Dtwd1	ENSMUST00000170908	ENSMUSP00000127662	TRANSLATION	protein_coding	-	CCDS16682.1	1	304	0	0	0.5	150	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056824	Zfp663	ENSMUST00000073062	ENSMUSP00000072813	TRANSLATION	protein_coding	-	CCDS17078.1	5	656	24	1.4	0.5	224.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056824	Zfp663	ENSMUST00000136482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056824	Zfp663	ENSMUST00000141140	ENSMUSP00000115254	TRANSLATION	protein_coding	stop	-	5	84	0	1	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056824	Zfp663	ENSMUST00000103085	ENSMUSP00000099374	TRANSLATION	protein_coding	-	CCDS17078.1	1	656	24	1.4	0.5	224.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075324	Fign	ENSMUST00000153538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075324	Fign	ENSMUST00000102728	ENSMUSP00000124338	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075324	Fign	ENSMUST00000131615	ENSMUSP00000122855	TRANSLATION	protein_coding	-	CCDS16070.1	1	759	12	0.6	10.3	116	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000075324	Fign	ENSMUST00000126042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027524	Edn3	ENSMUST00000137369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027524	Edn3	ENSMUST00000162473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027524	Edn3	ENSMUST00000029030	ENSMUSP00000029030	TRANSLATION	protein_coding	-	CCDS17156.1	1	214	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000027524	Edn3	ENSMUST00000140908	ENSMUSP00000125602	TRANSLATION	protein_coding	-	-	5	166	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000070875	Olfr1100	ENSMUST00000117211	ENSMUSP00000151088	TRANSLATION	protein_coding	-	CCDS16273.1	5	321	0	0.2	1.5	173.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070875	Olfr1100	ENSMUST00000094913	ENSMUSP00000092517	TRANSLATION	protein_coding	-	CCDS16273.1	-	321	0	0.2	1.5	173.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054766	Set	ENSMUST00000137291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054766	Set	ENSMUST00000102866	ENSMUSP00000099930	TRANSLATION	protein_coding	-	CCDS15866.1	1	289	0	5.65	1.5	115.4	0	-4,-7	-	-	10.902	PRINCIPAL:3
ENSMUSG00000054766	Set	ENSMUST00000149578	ENSMUSP00000119824	TRANSLATION	protein_coding	stop	-	3	151	0	3.2	0	66.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054766	Set	ENSMUST00000125824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054766	Set	ENSMUST00000134364	ENSMUSP00000114557	TRANSLATION	protein_coding	stop	-	5	215	0	4.95	1	108	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054766	Set	ENSMUST00000067996	ENSMUSP00000070002	TRANSLATION	protein_coding	-	CCDS57162.1	1	277	0	6.2	0.5	115.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000054766	Set	ENSMUST00000147590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040164	Kcns1	ENSMUST00000045196	ENSMUSP00000038901	TRANSLATION	protein_coding	-	CCDS17022.1	1	497	0	1	2.7	233.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000015787	Abo	ENSMUST00000114045	ENSMUSP00000109679	TRANSLATION	protein_coding	-	-	5	334	18	3.566	1.5	502.5	1	-3,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000015787	Abo	ENSMUST00000102900	ENSMUSP00000099964	TRANSLATION	protein_coding	-	CCDS15811.1	1	332	18	3.5	0.5	502.5	1	-3,-5	-	-	17.868	PRINCIPAL:2
ENSMUSG00000000392	Fap	ENSMUST00000172676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000392	Fap	ENSMUST00000174234	ENSMUSP00000133792	TRANSLATION	protein_coding	-	-	5	736	3	18.99	0	537.4	0	-1,-5	-	-	12.9	MINOR
ENSMUSG00000000392	Fap	ENSMUST00000128139	ENSMUSP00000134074	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	1.5	0	24	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000392	Fap	ENSMUST00000173745	ENSMUSP00000134305	TRANSLATION	protein_coding	stop	-	3	63	0	1.75	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000392	Fap	ENSMUST00000152085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000392	Fap	ENSMUST00000102732	ENSMUSP00000099793	TRANSLATION	protein_coding	-	CCDS16067.1	1	761	3	19.74	4	547.4	0	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000000392	Fap	ENSMUST00000136297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000392	Fap	ENSMUST00000174448	ENSMUSP00000134386	TRANSLATION	protein_coding	-	-	5	756	3	19.74	0	547.4	0	0,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000000392	Fap	ENSMUST00000000402	ENSMUSP00000000402	TRANSLATION	protein_coding	-	-	5	728	3	18.99	0	547.4	0	-1,-5	-	-	13.5	MINOR
ENSMUSG00000075194	Olfr1049	ENSMUST00000099899	ENSMUSP00000097483	TRANSLATION	protein_coding	-	CCDS16248.1	-	308	0	0.36	3.9	180.2	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075194	Olfr1049	ENSMUST00000216185	ENSMUSP00000149360	TRANSLATION	protein_coding	-	CCDS16248.1	5	308	0	0.36	3.9	180.2	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000097638	Carlr	ENSMUST00000181515	ENSMUSP00000159257	TRANSLATION	protein_coding	-	-	-	40	1	0	0	0	0	1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000027444	Cstdc1	ENSMUST00000028933	ENSMUSP00000028933	TRANSLATION	protein_coding	-	CCDS16846.1	1	130	0	1.44	1.7	48.8	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000026883	Dab2ip	ENSMUST00000145698	ENSMUSP00000114915	TRANSLATION	nonsense_mediated_decay	-	-	1	163	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000091010	ENSMUSP00000088532	TRANSLATION	protein_coding	-	CCDS50578.1	1	1189	0	7.3	2.9	788.2	0	-4,-7	-	-	12.613	ALTERNATIVE:2
ENSMUSG00000026883	Dab2ip	ENSMUST00000112983	ENSMUSP00000108607	TRANSLATION	protein_coding	-	CCDS71045.1	1	1065	0	7.3	4.1	788.2	0	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000026883	Dab2ip	ENSMUST00000112992	ENSMUSP00000108616	TRANSLATION	protein_coding	-	-	5	1138	0	7.3	0	464.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000124098	ENSMUSP00000119058	TRANSLATION	protein_coding	start	-	1	1083	0	7.3	0	788.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000156465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026883	Dab2ip	ENSMUST00000065001	ENSMUSP00000068832	TRANSLATION	protein_coding	-	CCDS15965.2	1	1124	0	7.3	0.5	788.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000026883	Dab2ip	ENSMUST00000135741	ENSMUSP00000122341	TRANSLATION	protein_coding	-	CCDS79788.1	1	1154	0	7.3	0.5	780	0	-4,-6	-	-	11.508	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000156669	ENSMUSP00000121506	TRANSLATION	protein_coding	start	-	1	713	0	6.7	0	351.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000112981	ENSMUSP00000108605	TRANSLATION	nonsense_mediated_decay	start	-	5	97	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026883	Dab2ip	ENSMUST00000112987	ENSMUSP00000108611	TRANSLATION	protein_coding	-	-	5	1132	0	7.3	0.5	788.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000026883	Dab2ip	ENSMUST00000138957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026883	Dab2ip	ENSMUST00000112986	ENSMUSP00000108610	TRANSLATION	protein_coding	-	CCDS50577.1	5	1132	0	7.3	1.7	780	0	-4,-5	-	-	11.734	MINOR
ENSMUSG00000015647	Lama5	ENSMUST00000015791	ENSMUSP00000015791	TRANSLATION	protein_coding	-	CCDS38375.1	1	3718	0	26.76	0.5	1526.8	0	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000015647	Lama5	ENSMUST00000149812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015647	Lama5	ENSMUST00000130796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015647	Lama5	ENSMUST00000123906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090093	Gm14399	ENSMUST00000099029	ENSMUSP00000096627	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090093	Gm14399	ENSMUST00000109062	ENSMUSP00000104690	TRANSLATION	protein_coding	-	-	5	156	0	1	0	74.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090093	Gm14399	ENSMUST00000109059	ENSMUSP00000104687	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	74.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090093	Gm14399	ENSMUST00000109060	ENSMUSP00000104688	TRANSLATION	protein_coding	-	-	3	610	75	6.38	0.5	481.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090093	Gm14399	ENSMUST00000108929	ENSMUSP00000104557	TRANSLATION	protein_coding	-	-	5	270	31	2.93	0	161.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026785	Pkn3	ENSMUST00000125346	ENSMUSP00000120268	TRANSLATION	protein_coding	stop	-	3	238	0	2.55	0	159.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026785	Pkn3	ENSMUST00000137240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026785	Pkn3	ENSMUST00000126838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026785	Pkn3	ENSMUST00000150770	ENSMUSP00000114492	TRANSLATION	protein_coding	stop	-	3	113	0	1	0	51.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026785	Pkn3	ENSMUST00000148650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026785	Pkn3	ENSMUST00000045246	ENSMUSP00000041025	TRANSLATION	protein_coding	-	CCDS15867.1	1	878	18	10.7	1.5	385.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026785	Pkn3	ENSMUST00000134591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026785	Pkn3	ENSMUST00000156197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075192	Olfr1053	ENSMUST00000099897	ENSMUSP00000097481	TRANSLATION	protein_coding	-	CCDS50625.1	-	313	0	0.2	5.1	154.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045493	Bhlhe23	ENSMUST00000108878	ENSMUSP00000104506	TRANSLATION	protein_coding	-	CCDS17187.1	-	223	0	0.4	2.7	50.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068950	Olfr338	ENSMUST00000217511	ENSMUSP00000149146	TRANSLATION	protein_coding	-	CCDS15971.1	5	306	0	0.42	1.5	189	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068950	Olfr338	ENSMUST00000091006	ENSMUSP00000088528	TRANSLATION	protein_coding	-	CCDS15971.1	-	306	0	0.42	1.5	189	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068950	Olfr338	ENSMUST00000072114	ENSMUSP00000071985	TRANSLATION	protein_coding	-	CCDS15971.1	3	306	0	0.42	1.5	189	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028640	Tfap2c	ENSMUST00000128406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028640	Tfap2c	ENSMUST00000030391	ENSMUSP00000030391	TRANSLATION	protein_coding	-	CCDS17135.1	1	449	0	0	6.3	289.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028640	Tfap2c	ENSMUST00000099058	ENSMUSP00000096657	TRANSLATION	protein_coding	-	-	1	513	0	0	0	289.1	0	-4,0	-	-	6	MINOR
ENSMUSG00000028640	Tfap2c	ENSMUST00000170744	ENSMUSP00000129922	TRANSLATION	protein_coding	-	CCDS50810.1	1	488	0	0	1.5	289.1	0	-4,-2	-	-	6.188	MINOR
ENSMUSG00000028640	Tfap2c	ENSMUST00000142633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028640	Tfap2c	ENSMUST00000122982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075090	Olfr1234	ENSMUST00000111543	ENSMUSP00000107168	TRANSLATION	protein_coding	-	CCDS16377.1	2	314	0	0.36	1.5	154.5	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075090	Olfr1234	ENSMUST00000099783	ENSMUSP00000097371	TRANSLATION	protein_coding	-	CCDS16377.1	-	314	0	0.36	1.5	154.5	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075090	Olfr1234	ENSMUST00000137692	ENSMUSP00000149303	TRANSLATION	protein_coding	-	CCDS16377.1	3	314	0	0.36	1.5	154.5	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000016933	Plcg1	ENSMUST00000173791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016933	Plcg1	ENSMUST00000174885	ENSMUSP00000134720	TRANSLATION	protein_coding	stop	-	2	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016933	Plcg1	ENSMUST00000109462	ENSMUSP00000105088	TRANSLATION	protein_coding	-	-	5	1290	13	18.915	7.1	628	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016933	Plcg1	ENSMUST00000017077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016933	Plcg1	ENSMUST00000129568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016933	Plcg1	ENSMUST00000173061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016933	Plcg1	ENSMUST00000103115	ENSMUSP00000099404	TRANSLATION	protein_coding	-	CCDS16996.1	1	1302	13	18.915	0.5	628	0	-4,-5	-	-	18	MINOR
ENSMUSG00000016933	Plcg1	ENSMUST00000173335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016933	Plcg1	ENSMUST00000143997	ENSMUSP00000115181	TRANSLATION	protein_coding	start	-	3	132	3	1.96	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016933	Plcg1	ENSMUST00000151590	ENSMUSP00000133771	TRANSLATION	nonsense_mediated_decay	-	-	1	513	7	6.215	0	219.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016933	Plcg1	ENSMUST00000147254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016933	Plcg1	ENSMUST00000124652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039128	Cdc123	ENSMUST00000043864	ENSMUSP00000043033	TRANSLATION	protein_coding	-	CCDS15666.1	1	336	2	6.016	10.8	356.5	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000039128	Cdc123	ENSMUST00000138312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039128	Cdc123	ENSMUST00000150876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039128	Cdc123	ENSMUST00000128467	ENSMUSP00000141306	TRANSLATION	protein_coding	start	-	5	134	0	2.728	0	125.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039128	Cdc123	ENSMUST00000152519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039128	Cdc123	ENSMUST00000130142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039128	Cdc123	ENSMUST00000152998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039128	Cdc123	ENSMUST00000124287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039128	Cdc123	ENSMUST00000124662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109528	Olfr1309	ENSMUST00000215045	ENSMUSP00000151123	TRANSLATION	protein_coding	-	-	5	312	0	0	6.3	124.8	8	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000109528	Olfr1309	ENSMUST00000207885	ENSMUSP00000146426	TRANSLATION	protein_coding	-	CCDS16539.1	-	320	0	0	0.5	124.8	8	-4,-5	-	-	6	MINOR
ENSMUSG00000109528	Olfr1309	ENSMUST00000216948	ENSMUSP00000150941	TRANSLATION	protein_coding	-	-	5	312	0	0	6.3	124.8	8	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000109528	Olfr1309	ENSMUST00000217452	ENSMUSP00000150871	TRANSLATION	protein_coding	-	-	5	312	0	0	6.3	124.8	8	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000109528	Olfr1309	ENSMUST00000214537	ENSMUSP00000150302	TRANSLATION	protein_coding	-	-	5	312	0	0	6.3	124.8	8	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000109528	Olfr1309	ENSMUST00000214935	ENSMUSP00000150108	TRANSLATION	protein_coding	-	-	5	312	0	0	6.3	124.8	8	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000053166	Cdh22	ENSMUST00000065438	ENSMUSP00000066864	TRANSLATION	protein_coding	-	CCDS17073.1	1	813	52	8.96	1.5	426.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000053166	Cdh22	ENSMUST00000138643	ENSMUSP00000120785	TRANSLATION	nonsense_mediated_decay	-	-	5	408	37	5	1	175.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025815	Dhtkd1	ENSMUST00000155977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025815	Dhtkd1	ENSMUST00000151649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025815	Dhtkd1	ENSMUST00000026924	ENSMUSP00000026924	TRANSLATION	protein_coding	-	CCDS38040.1	1	921	20	11.705	1.5	516.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000025815	Dhtkd1	ENSMUST00000127609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025815	Dhtkd1	ENSMUST00000095147	ENSMUSP00000092769	TRANSLATION	protein_coding	-	CCDS38040.1	5	921	20	11.705	1.5	516.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000007659	Bcl2l1	ENSMUST00000128172	ENSMUSP00000117716	TRANSLATION	protein_coding	stop	-	1	188	0	3.5	0	174.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007659	Bcl2l1	ENSMUST00000134357	ENSMUSP00000120024	TRANSLATION	protein_coding	stop	-	2	154	0	2.5	0	126.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007659	Bcl2l1	ENSMUST00000146380	ENSMUSP00000114911	TRANSLATION	protein_coding	stop	-	2	96	0	1.5	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007659	Bcl2l1	ENSMUST00000156688	ENSMUSP00000115611	TRANSLATION	protein_coding	stop	-	2	78	0	1	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007659	Bcl2l1	ENSMUST00000007803	ENSMUSP00000007803	TRANSLATION	protein_coding	-	CCDS16899.1	1	233	0	4.5	7.5	174.3	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000007659	Bcl2l1	ENSMUST00000140436	ENSMUSP00000134596	TRANSLATION	protein_coding	-	-	2	209	0	3.65	0	174.3	0	-4,-5	-	-	10.302	MINOR
ENSMUSG00000007659	Bcl2l1	ENSMUST00000173755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007659	Bcl2l1	ENSMUST00000109820	ENSMUSP00000105445	TRANSLATION	protein_coding	-	CCDS16899.1	1	233	0	4.5	7.5	174.3	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000007659	Bcl2l1	ENSMUST00000134902	ENSMUSP00000134614	TRANSLATION	protein_coding	-	-	1	209	0	3.65	0	174.3	0	-4,-5	-	-	10.302	MINOR
ENSMUSG00000027301	Oxt	ENSMUST00000028764	ENSMUSP00000028764	TRANSLATION	protein_coding	-	CCDS16745.1	1	125	13	1.9	9.3	132.6	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026843	Fubp3	ENSMUST00000055244	ENSMUSP00000053474	TRANSLATION	protein_coding	-	CCDS15899.1	1	575	0	9.222	1.5	287.1	0	-4,-5	-	-	12.188	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000113482	ENSMUSP00000109110	TRANSLATION	protein_coding	-	CCDS71025.1	1	569	0	9.222	6.3	287.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026843	Fubp3	ENSMUST00000194386	ENSMUSP00000142262	TRANSLATION	protein_coding	stop	-	3	123	0	1.462	0	42.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000134553	ENSMUSP00000141283	TRANSLATION	nonsense_mediated_decay	start	-	5	191	0	4.35	0	113.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000137889	ENSMUSP00000120241	TRANSLATION	protein_coding	stop	-	2	97	0	0.891	0	20.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000130578	ENSMUSP00000141386	TRANSLATION	protein_coding	start	-	5	52	0	0	0	23	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000137504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026843	Fubp3	ENSMUST00000150473	ENSMUSP00000123589	TRANSLATION	protein_coding	start	-	5	104	0	0	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000129903	ENSMUSP00000117970	TRANSLATION	protein_coding	start	-	5	264	0	3	0	83.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000154050	ENSMUSP00000141873	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	0.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026843	Fubp3	ENSMUST00000132534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026833	Olfm1	ENSMUST00000152415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026833	Olfm1	ENSMUST00000102879	ENSMUSP00000099943	TRANSLATION	protein_coding	-	CCDS15835.1	1	153	0	3	4	162.9	0	-2,-5	-	-	0.744	MINOR
ENSMUSG00000026833	Olfm1	ENSMUST00000113920	ENSMUSP00000109553	TRANSLATION	protein_coding	-	-	1	442	0	5.066	0	457.7	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000026833	Olfm1	ENSMUST00000028177	ENSMUSP00000028177	TRANSLATION	protein_coding	-	CCDS15834.1	1	485	0	6	17.1	457.7	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026833	Olfm1	ENSMUST00000100244	ENSMUSP00000097815	TRANSLATION	protein_coding	-	CCDS15833.1	1	457	0	5.066	8	457.7	0	2,-2	-	-	11.874	MINOR
ENSMUSG00000075119	Olfr1197	ENSMUST00000099815	ENSMUSP00000097403	TRANSLATION	protein_coding	-	CCDS16345.1	-	314	0	0.2	0.5	154.5	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075119	Olfr1197	ENSMUST00000213118	ENSMUSP00000150290	TRANSLATION	protein_coding	-	CCDS16345.1	5	314	0	0.2	0.5	154.5	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000074947	Olfr1312	ENSMUST00000099600	ENSMUSP00000097195	TRANSLATION	protein_coding	-	CCDS16542.1	-	317	0	0.36	1.5	147.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074947	Olfr1312	ENSMUST00000213582	ENSMUSP00000148920	TRANSLATION	protein_coding	-	CCDS16542.1	5	317	0	0.36	1.5	147.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074947	Olfr1312	ENSMUST00000215531	ENSMUSP00000149430	TRANSLATION	protein_coding	-	CCDS16542.1	5	317	0	0.36	1.5	147.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074947	Olfr1312	ENSMUST00000213961	ENSMUSP00000150415	TRANSLATION	protein_coding	-	CCDS16542.1	5	317	0	0.36	1.5	147.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068130	Zfp442	ENSMUST00000185796	ENSMUSP00000140098	TRANSLATION	protein_coding	start	-	5	610	65	2.8	0	372.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068130	Zfp442	ENSMUST00000109916	ENSMUSP00000105542	TRANSLATION	protein_coding	-	CCDS79853.1	1	667	73	3.8	0.5	415.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075382	Olfr353	ENSMUST00000215925	ENSMUSP00000150011	TRANSLATION	protein_coding	-	CCDS15986.1	5	311	0	0.42	1.5	189.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075382	Olfr353	ENSMUST00000100149	ENSMUSP00000097726	TRANSLATION	protein_coding	-	CCDS15986.1	-	311	0	0.42	1.5	189.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075382	Olfr353	ENSMUST00000217215	ENSMUSP00000149378	TRANSLATION	protein_coding	-	CCDS15986.1	5	311	0	0.42	1.5	189.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001855	Nup214	ENSMUST00000130185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001855	Nup214	ENSMUST00000065398	ENSMUSP00000066492	TRANSLATION	protein_coding	-	CCDS38098.1	1	2085	0	12.25	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000001855	Nup214	ENSMUST00000123062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001855	Nup214	ENSMUST00000153096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001855	Nup214	ENSMUST00000152791	ENSMUSP00000142255	TRANSLATION	protein_coding	start	-	3	147	0	0.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001855	Nup214	ENSMUST00000124455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001855	Nup214	ENSMUST00000130975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001855	Nup214	ENSMUST00000126301	ENSMUSP00000141436	TRANSLATION	protein_coding	start/stop	-	5	98	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001855	Nup214	ENSMUST00000129496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001855	Nup214	ENSMUST00000138012	ENSMUSP00000115665	TRANSLATION	protein_coding	start	-	1	581	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001855	Nup214	ENSMUST00000146138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075064	Olfr1506	ENSMUST00000213994	ENSMUSP00000149370	TRANSLATION	protein_coding	-	CCDS16409.1	3	309	0	0.2	5.1	169.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075064	Olfr1506	ENSMUST00000215571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047594	Olfr1122	ENSMUST00000056435	ENSMUSP00000052190	TRANSLATION	protein_coding	-	CCDS16289.1	-	326	0	0.36	1.5	171.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047594	Olfr1122	ENSMUST00000215371	ENSMUSP00000149403	TRANSLATION	protein_coding	-	CCDS16289.1	5	326	0	0.36	1.5	171.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006418	Rnf114	ENSMUST00000078050	ENSMUSP00000077197	TRANSLATION	protein_coding	-	CCDS17101.1	1	229	18	3.43	5.1	99.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000006418	Rnf114	ENSMUST00000127939	ENSMUSP00000138430	TRANSLATION	nonsense_mediated_decay	-	-	1	57	4	0.6	0	26.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006418	Rnf114	ENSMUST00000109214	ENSMUSP00000104837	TRANSLATION	protein_coding	-	CCDS17101.1	1	229	18	3.43	5.1	99.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000055485	Soga1	ENSMUST00000069098	ENSMUSP00000066556	TRANSLATION	protein_coding	-	CCDS50781.1	1	1654	0	0	0.5	287.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055485	Soga1	ENSMUST00000153229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055485	Soga1	ENSMUST00000133571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000142004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000135456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000015239	ENSMUSP00000015239	TRANSLATION	protein_coding	-	CCDS15778.1	1	573	0	3.08	1.5	78.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000015095	Fbxw5	ENSMUST00000126601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000135511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000124375	ENSMUSP00000117676	TRANSLATION	protein_coding	start/stop	-	5	246	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015095	Fbxw5	ENSMUST00000148845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000124258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015095	Fbxw5	ENSMUST00000129104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094786	Gm14403	ENSMUST00000108940	ENSMUSP00000104568	TRANSLATION	protein_coding	-	-	5	257	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000094786	Gm14403	ENSMUST00000108947	ENSMUSP00000104575	TRANSLATION	protein_coding	-	-	5	402	43	3.45	0	304	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094786	Gm14403	ENSMUST00000142549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075073	Olfr1256	ENSMUST00000099763	ENSMUSP00000097351	TRANSLATION	protein_coding	-	CCDS16394.1	-	306	0	0.36	7.5	160	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075073	Olfr1256	ENSMUST00000215613	ENSMUSP00000149123	TRANSLATION	protein_coding	-	CCDS16394.1	3	306	0	0.36	7.5	160	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075073	Olfr1256	ENSMUST00000213833	ENSMUSP00000150906	TRANSLATION	protein_coding	-	CCDS16394.1	3	306	0	0.36	7.5	160	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075073	Olfr1256	ENSMUST00000111520	ENSMUSP00000107145	TRANSLATION	nonsense_mediated_decay	-	-	5	306	0	0.36	7.5	160	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000000876	Pxmp4	ENSMUST00000000896	ENSMUSP00000000896	TRANSLATION	protein_coding	-	CCDS16936.1	1	212	0	0	6.4	43.9	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000000876	Pxmp4	ENSMUST00000109703	ENSMUSP00000105325	TRANSLATION	protein_coding	-	-	1	92	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000095315	Gm10130	ENSMUST00000133235	ENSMUSP00000117028	TRANSLATION	protein_coding	start/stop	-	5	101	0	1.6	0	81.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095315	Gm10130	ENSMUST00000238230	ENSMUSP00000158750	TRANSLATION	protein_coding	-	-	-	409	35	2.2	0	265.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027454	Gins1	ENSMUST00000123217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027454	Gins1	ENSMUST00000140950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027454	Gins1	ENSMUST00000152991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027454	Gins1	ENSMUST00000028948	ENSMUSP00000028948	TRANSLATION	protein_coding	-	CCDS50743.1	1	196	0	6	19.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000027434	Nkx2-2	ENSMUST00000172627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027434	Nkx2-2	ENSMUST00000109970	ENSMUSP00000105596	TRANSLATION	protein_coding	-	CCDS38259.1	1	248	0	1	0.5	68.9	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027434	Nkx2-2	ENSMUST00000067075	ENSMUSP00000069666	TRANSLATION	protein_coding	-	CCDS16834.1	1	273	0	1	11	68.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027434	Nkx2-2	ENSMUST00000109969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042155	Klhl23	ENSMUST00000053087	ENSMUSP00000050219	TRANSLATION	protein_coding	-	CCDS16100.1	1	558	0	1.56	15	364.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042155	Klhl23	ENSMUST00000152898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042155	Klhl23	ENSMUST00000135759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027303	Ptpra	ENSMUST00000230491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000230886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000229567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000077303	ENSMUSP00000076533	TRANSLATION	protein_coding	-	CCDS16743.1	1	829	22	14.5	0.5	539.7	1	1,-3	-	-	15.762	MINOR
ENSMUSG00000027303	Ptpra	ENSMUST00000028769	ENSMUSP00000028769	TRANSLATION	protein_coding	-	CCDS50712.1	1	793	22	15	6.3	560.3	1	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000027303	Ptpra	ENSMUST00000230516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000230615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000230981	ENSMUSP00000155099	TRANSLATION	protein_coding	stop	-	-	374	1	5	0	137.7	1	1,-3	-	-	-1	MINOR
ENSMUSG00000027303	Ptpra	ENSMUST00000229814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027303	Ptpra	ENSMUST00000230640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006469	Slc34a3	ENSMUST00000142095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006469	Slc34a3	ENSMUST00000152997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006469	Slc34a3	ENSMUST00000144884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006469	Slc34a3	ENSMUST00000006638	ENSMUSP00000006638	TRANSLATION	protein_coding	-	CCDS15754.1	1	601	0	0	2.7	133.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000006469	Slc34a3	ENSMUST00000124146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006469	Slc34a3	ENSMUST00000155420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006469	Slc34a3	ENSMUST00000137482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068615	Gjd2	ENSMUST00000090275	ENSMUSP00000087742	TRANSLATION	protein_coding	-	CCDS16563.1	1	321	0	0.8	7.5	309.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027329	Spef1	ENSMUST00000127987	ENSMUSP00000114178	TRANSLATION	protein_coding	start	-	3	171	0	3	0	113.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027329	Spef1	ENSMUST00000110218	ENSMUSP00000105847	TRANSLATION	protein_coding	-	CCDS38245.1	1	234	0	3.33	6.3	113.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027329	Spef1	ENSMUST00000028801	ENSMUSP00000028801	TRANSLATION	protein_coding	-	CCDS38245.1	1	234	0	3.33	6.3	113.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000055312	Them7	ENSMUST00000068813	ENSMUSP00000063340	TRANSLATION	protein_coding	-	CCDS38191.1	1	223	11	0.84	0.5	43.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000055312	Them7	ENSMUST00000131060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036186	Dipk1b	ENSMUST00000144449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036186	Dipk1b	ENSMUST00000153849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036186	Dipk1b	ENSMUST00000074240	ENSMUSP00000073860	TRANSLATION	protein_coding	-	CCDS50542.1	1	431	0	0	7.5	385	0	-1,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000027338	Prnd	ENSMUST00000110172	ENSMUSP00000105801	TRANSLATION	protein_coding	-	CCDS16767.1	1	179	0	1	6.3	236.8	0	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027338	Prnd	ENSMUST00000110171	ENSMUSP00000105800	TRANSLATION	protein_coding	-	CCDS16767.1	1	179	0	1	6.3	236.8	0	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027338	Prnd	ENSMUST00000110169	ENSMUSP00000105798	TRANSLATION	protein_coding	-	CCDS16767.1	1	179	0	1	6.3	236.8	0	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027338	Prnd	ENSMUST00000110170	ENSMUSP00000105799	TRANSLATION	protein_coding	-	CCDS16767.1	1	179	0	1	6.3	236.8	0	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000057761	Olfr1022	ENSMUST00000054736	ENSMUSP00000059312	TRANSLATION	protein_coding	-	CCDS16225.1	-	315	0	0.36	6.4	172.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045838	Ccdc9b	ENSMUST00000059997	ENSMUSP00000051853	TRANSLATION	protein_coding	-	CCDS50670.1	1	545	0	0	0.5	206.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000045838	Ccdc9b	ENSMUST00000151270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026994	Galnt3	ENSMUST00000153563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026994	Galnt3	ENSMUST00000028378	ENSMUSP00000028378	TRANSLATION	protein_coding	-	CCDS16075.1	1	633	23	7.26	7.5	199.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026994	Galnt3	ENSMUST00000155453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026994	Galnt3	ENSMUST00000150793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058835	Abi1	ENSMUST00000123948	ENSMUSP00000118491	TRANSLATION	protein_coding	-	CCDS38061.1	1	481	0	7.245	11	181.9	0	-4,-5	-	-	15.176	PRINCIPAL:4
ENSMUSG00000058835	Abi1	ENSMUST00000140164	ENSMUSP00000120462	TRANSLATION	protein_coding	-	CCDS50513.1	1	475	0	7.245	11	179	0	-4,-5	-	-	15.002	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000153931	ENSMUSP00000120769	TRANSLATION	protein_coding	-	-	5	393	0	7.2	13.5	181.9	0	-4,-5	-	-	15.886	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000154162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058835	Abi1	ENSMUST00000114544	ENSMUSP00000110191	TRANSLATION	protein_coding	-	CCDS38058.1	1	388	0	7.2	13.5	179	0	-4,-5	-	-	15.712	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000091394	ENSMUSP00000088957	TRANSLATION	protein_coding	-	CCDS84480.1	5	480	0	7.245	11	181.9	0	-4,-5	-	-	15.176	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000148294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058835	Abi1	ENSMUST00000178908	ENSMUSP00000136846	TRANSLATION	protein_coding	-	-	5	481	0	7.245	11	182.3	0	-4,-5	-	-	15.2	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000135308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058835	Abi1	ENSMUST00000149719	ENSMUSP00000120621	TRANSLATION	protein_coding	-	CCDS38060.1	1	446	0	7.2	8.8	179	0	-4,-5	-	-	14.208	MINOR
ENSMUSG00000058835	Abi1	ENSMUST00000126112	ENSMUSP00000117335	TRANSLATION	protein_coding	-	CCDS38059.1	1	476	0	7.245	11	179	0	-4,-5	-	-	15.002	ALTERNATIVE:1
ENSMUSG00000058835	Abi1	ENSMUST00000093171	ENSMUSP00000090860	TRANSLATION	protein_coding	-	CCDS84479.1	5	451	0	7.2	8.8	181.9	0	-4,-5	-	-	14.382	MINOR
ENSMUSG00000058835	Abi1	ENSMUST00000139038	ENSMUSP00000116093	TRANSLATION	protein_coding	-	-	5	422	0	7.245	4.6	181.9	0	-4,-5	-	-	13.128	MINOR
ENSMUSG00000058835	Abi1	ENSMUST00000156344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058835	Abi1	ENSMUST00000078977	ENSMUSP00000077997	TRANSLATION	protein_coding	-	CCDS84481.1	5	452	0	7.2	8.8	181.9	0	-4,-5	-	-	14.382	MINOR
ENSMUSG00000027263	Tubgcp4	ENSMUST00000154318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000110657	ENSMUSP00000106285	TRANSLATION	protein_coding	-	-	1	620	0	13	0	365	0	-4,-6	-	-	7.998	MINOR
ENSMUSG00000027263	Tubgcp4	ENSMUST00000143305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000138601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000143320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000126817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000110658	ENSMUSP00000106286	TRANSLATION	protein_coding	-	CCDS71124.1	1	666	0	15	13	365	0	-4,-6	-	-	16	ALTERNATIVE:1
ENSMUSG00000027263	Tubgcp4	ENSMUST00000130929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027263	Tubgcp4	ENSMUST00000144076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000135555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027263	Tubgcp4	ENSMUST00000154633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027263	Tubgcp4	ENSMUST00000039541	ENSMUSP00000044049	TRANSLATION	protein_coding	-	CCDS16637.1	1	667	0	15	13	364.3	0	-4,-6	-	-	15.958	PRINCIPAL:3
ENSMUSG00000027263	Tubgcp4	ENSMUST00000133773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027263	Tubgcp4	ENSMUST00000186659	ENSMUSP00000140417	TRANSLATION	protein_coding	-	CCDS71124.1	1	666	0	15	13	365	0	-4,-6	-	-	16	ALTERNATIVE:1
ENSMUSG00000027263	Tubgcp4	ENSMUST00000144123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078894	2210418O10Rik	ENSMUST00000136719	ENSMUSP00000118168	TRANSLATION	protein_coding	-	CCDS84595.1	1	102	7	1.95	0.5	30.1	0	-4,-5	-	-	11.16	MINOR
ENSMUSG00000078894	2210418O10Rik	ENSMUST00000166464	ENSMUSP00000126545	TRANSLATION	protein_coding	start	-	-	249	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078894	2210418O10Rik	ENSMUST00000099009	ENSMUSP00000096607	TRANSLATION	protein_coding	-	CCDS84594.1	1	134	7	2.95	0.5	110.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078894	2210418O10Rik	ENSMUST00000135430	ENSMUSP00000116894	TRANSLATION	protein_coding	-	-	5	64	0	1.95	1.5	80.1	0	-4,-5	-	-	8.16	MINOR
ENSMUSG00000078878	Gm14305	ENSMUST00000108983	ENSMUSP00000104611	TRANSLATION	protein_coding	-	CCDS38368.1	3	498	59	2.05	0.5	392.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078878	Gm14305	ENSMUST00000108980	ENSMUSP00000104608	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078878	Gm14305	ENSMUST00000108981	ENSMUSP00000104609	TRANSLATION	protein_coding	-	CCDS38368.1	2	498	59	2.05	0.5	392.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017740	Slc12a5	ENSMUST00000202479	ENSMUSP00000144540	TRANSLATION	protein_coding	-	-	5	231	0	0	0	38.4	6	-4,-5	-	-	0	MINOR
ENSMUSG00000017740	Slc12a5	ENSMUST00000202223	ENSMUSP00000143870	TRANSLATION	protein_coding	-	-	1	1133	0	0	2.9	382.6	9	-2,1	-	-	6.768	MINOR
ENSMUSG00000017740	Slc12a5	ENSMUST00000202136	ENSMUSP00000143973	TRANSLATION	nonsense_mediated_decay	-	-	5	186	0	0	0	39.4	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000017740	Slc12a5	ENSMUST00000208579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017740	Slc12a5	ENSMUST00000135918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017740	Slc12a5	ENSMUST00000202623	ENSMUSP00000144623	TRANSLATION	protein_coding	-	-	1	1138	0	0	4.1	382.8	9	-2,1	-	-	7.275	MINOR
ENSMUSG00000017740	Slc12a5	ENSMUST00000125867	ENSMUSP00000144365	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000017740	Slc12a5	ENSMUST00000124372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017740	Slc12a5	ENSMUST00000099092	ENSMUSP00000096690	TRANSLATION	protein_coding	-	CCDS38332.1	1	1115	0	0	8.3	382.8	9	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000017740	Slc12a5	ENSMUST00000137302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039063	Echdc3	ENSMUST00000132810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039063	Echdc3	ENSMUST00000042658	ENSMUSP00000037371	TRANSLATION	protein_coding	-	CCDS15672.1	1	300	16	4.6	3.9	175.9	0	-2,2	-	-	19	PRINCIPAL:1
ENSMUSG00000039063	Echdc3	ENSMUST00000114941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034226	Rhov	ENSMUST00000037360	ENSMUSP00000041411	TRANSLATION	protein_coding	-	CCDS16598.1	1	236	22	2.5	7.8	155.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000050700	Emilin3	ENSMUST00000057169	ENSMUSP00000059732	TRANSLATION	protein_coding	-	CCDS16999.1	1	758	0	0	0.5	56.3	0	4,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000050700	Emilin3	ENSMUST00000109454	ENSMUSP00000105080	TRANSLATION	protein_coding	-	CCDS71181.1	5	711	0	0	1.5	56.3	0	4,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000027636	Sla2	ENSMUST00000109561	ENSMUSP00000105189	TRANSLATION	protein_coding	-	CCDS38302.1	1	259	0	4.63	0.5	97.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027636	Sla2	ENSMUST00000029164	ENSMUSP00000029164	TRANSLATION	protein_coding	-	CCDS38302.1	1	259	0	4.63	0.5	97.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000052533	Nup188	ENSMUST00000148969	ENSMUSP00000121742	TRANSLATION	nonsense_mediated_decay	-	-	5	118	0	3.08	0	41.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052533	Nup188	ENSMUST00000133603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052533	Nup188	ENSMUST00000156023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052533	Nup188	ENSMUST00000138666	ENSMUSP00000122398	TRANSLATION	protein_coding	-	-	1	119	0	3.08	0	43.8	0	-4,-2	-	-	0	MINOR
ENSMUSG00000052533	Nup188	ENSMUST00000064447	ENSMUSP00000065836	TRANSLATION	protein_coding	-	CCDS15878.1	1	1759	0	38.68	0.5	697.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000052533	Nup188	ENSMUST00000113634	ENSMUSP00000109264	TRANSLATION	protein_coding	-	-	2	155	0	3.58	0	52.9	0	-4,-2	-	-	0	MINOR
ENSMUSG00000052533	Nup188	ENSMUST00000133421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109946	Brd3os	ENSMUST00000209262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109946	Brd3os	ENSMUST00000209765	ENSMUSP00000147455	TRANSLATION	protein_coding	-	-	-	84	0	0	2.4	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000027457	Snph	ENSMUST00000109877	ENSMUSP00000105503	TRANSLATION	protein_coding	-	CCDS71161.1	1	459	0	0	0.5	423.3	1	-4,-2	-	-	2.946	MINOR
ENSMUSG00000027457	Snph	ENSMUST00000028951	ENSMUSP00000028951	TRANSLATION	protein_coding	-	CCDS16871.1	1	528	0	0	0.5	474.2	1	-3,1	-	-	6	PRINCIPAL:3
ENSMUSG00000027457	Snph	ENSMUST00000109875	ENSMUSP00000105501	TRANSLATION	protein_coding	-	CCDS16871.1	1	528	0	0	0.5	474.2	1	-3,1	-	-	6	PRINCIPAL:3
ENSMUSG00000027457	Snph	ENSMUST00000143367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027457	Snph	ENSMUST00000141692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027457	Snph	ENSMUST00000137936	ENSMUSP00000123255	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	117.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000027457	Snph	ENSMUST00000094456	ENSMUSP00000092026	TRANSLATION	protein_coding	-	CCDS71162.1	1	495	0	0	0.5	474.2	1	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000027457	Snph	ENSMUST00000146172	ENSMUSP00000138114	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027457	Snph	ENSMUST00000145434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027457	Snph	ENSMUST00000133378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027457	Snph	ENSMUST00000148755	ENSMUSP00000138249	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036850	Mrpl41	ENSMUST00000045604	ENSMUSP00000043561	TRANSLATION	protein_coding	-	CCDS15744.1	1	135	0	2	12.7	150	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000036850	Mrpl41	ENSMUST00000194392	ENSMUSP00000141974	TRANSLATION	protein_coding	stop	-	3	97	0	1	0	42.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000050714	Zbtb26	ENSMUST00000067043	ENSMUSP00000070071	TRANSLATION	protein_coding	-	CCDS16001.1	1	440	15	0	12.8	148.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050714	Zbtb26	ENSMUST00000203522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050714	Zbtb26	ENSMUST00000102789	ENSMUSP00000099850	TRANSLATION	protein_coding	-	-	1	451	15	0	1	148.4	0	-4,-6	-	-	12	MINOR
ENSMUSG00000043241	Upf2	ENSMUST00000060092	ENSMUSP00000058375	TRANSLATION	protein_coding	-	CCDS38041.1	1	1269	0	16.05	3.5	386.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000043241	Upf2	ENSMUST00000144901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043241	Upf2	ENSMUST00000128200	ENSMUSP00000119348	TRANSLATION	protein_coding	start	-	1	523	0	6.8	0	258.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075212	Olfr154	ENSMUST00000099918	ENSMUSP00000097502	TRANSLATION	protein_coding	-	CCDS16213.1	-	318	0	0	1.5	163.5	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061689	Dlgap4	ENSMUST00000123730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061689	Dlgap4	ENSMUST00000177013	ENSMUSP00000135409	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	19.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000109566	ENSMUSP00000105194	TRANSLATION	protein_coding	-	CCDS38300.1	1	285	0	3.544	6.5	435.3	0	-4,-5	-	-	10.698	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000070782	ENSMUSP00000068745	TRANSLATION	protein_coding	-	CCDS71171.1	1	989	0	3.544	5.3	441.4	0	-4,-6	-	-	10.512	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000169464	ENSMUSP00000126980	TRANSLATION	protein_coding	-	CCDS16968.1	5	992	0	3.544	7.5	499.3	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000061689	Dlgap4	ENSMUST00000109567	ENSMUSP00000105195	TRANSLATION	protein_coding	-	CCDS71171.1	5	989	0	3.544	5.3	441.4	0	-4,-6	-	-	10.512	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000137356	ENSMUSP00000135698	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000131157	ENSMUSP00000134941	TRANSLATION	protein_coding	stop	-	5	109	0	2.794	0	194.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000099145	ENSMUSP00000096749	TRANSLATION	protein_coding	-	CCDS38299.1	1	453	0	3.544	6.5	499.3	0	-4,-6	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000061689	Dlgap4	ENSMUST00000171030	ENSMUSP00000129756	TRANSLATION	protein_coding	stop	-	5	266	0	3.444	0	381.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000146412	ENSMUSP00000135156	TRANSLATION	protein_coding	stop	-	5	122	0	0.8	0	107.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000127944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061689	Dlgap4	ENSMUST00000000094	ENSMUSP00000000094	TRANSLATION	protein_coding	-	-	5	244	0	3.394	0	291.7	0	-4,-6	-	-	5.7	MINOR
ENSMUSG00000061689	Dlgap4	ENSMUST00000109568	ENSMUSP00000105196	TRANSLATION	protein_coding	-	CCDS71172.1	1	975	0	3.544	4.1	499.3	0	-4,-6	-	-	13.431	MINOR
ENSMUSG00000027306	Nusap1	ENSMUST00000125491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027306	Nusap1	ENSMUST00000028771	ENSMUSP00000028771	TRANSLATION	protein_coding	-	CCDS38206.1	1	394	0	0	0.5	283.7	0	-4,-5	-	-	3.846	MINOR
ENSMUSG00000027306	Nusap1	ENSMUST00000153036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027306	Nusap1	ENSMUST00000068225	ENSMUSP00000068713	TRANSLATION	protein_coding	-	CCDS16605.1	1	427	0	0	0.5	319.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044349	Snhg11	ENSMUST00000148965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044349	Snhg11	ENSMUST00000239345	-	NO_TRANSLATION	lincRNA
ENSMUSG00000044349	Snhg11	ENSMUST00000239310	-	NO_TRANSLATION	lincRNA
ENSMUSG00000044349	Snhg11	ENSMUST00000239262	-	NO_TRANSLATION	lincRNA
ENSMUSG00000044349	Snhg11	ENSMUST00000109488	ENSMUSP00000105114	TRANSLATION	protein_coding	-	CCDS38308.1	1	87	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000044349	Snhg11	ENSMUST00000137320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044349	Snhg11	ENSMUST00000149303	-	NO_TRANSLATION	lincRNA
ENSMUSG00000044349	Snhg11	ENSMUST00000138307	-	NO_TRANSLATION	lincRNA
ENSMUSG00000026730	Pter	ENSMUST00000195521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026730	Pter	ENSMUST00000114796	ENSMUSP00000110444	TRANSLATION	protein_coding	stop	-	5	253	6	3.5	0	327.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026730	Pter	ENSMUST00000193742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026730	Pter	ENSMUST00000150283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026730	Pter	ENSMUST00000134794	ENSMUSP00000117009	TRANSLATION	protein_coding	-	CCDS15691.1	1	349	7	4.9	7.5	501.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000026730	Pter	ENSMUST00000154269	ENSMUSP00000118645	TRANSLATION	protein_coding	stop	-	5	321	7	4.3	0	452	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026730	Pter	ENSMUST00000028063	ENSMUSP00000028063	TRANSLATION	protein_coding	-	CCDS84471.1	1	260	6	3	0.5	369.3	0	-4,-6	-	-	7.344	MINOR
ENSMUSG00000036641	Ccdc148	ENSMUST00000226455	ENSMUSP00000153944	TRANSLATION	protein_coding	-	-	-	599	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036641	Ccdc148	ENSMUST00000134708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036641	Ccdc148	ENSMUST00000077687	ENSMUSP00000076871	TRANSLATION	protein_coding	-	CCDS50587.1	1	527	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000036641	Ccdc148	ENSMUST00000131959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094125	Gm13698	ENSMUST00000178325	ENSMUSP00000136916	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000094125	Gm13698	ENSMUST00000179192	ENSMUSP00000137026	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035772	Mrps2	ENSMUST00000038600	ENSMUSP00000036725	TRANSLATION	protein_coding	-	CCDS15838.1	1	291	0	3.2	1.5	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000035772	Mrps2	ENSMUST00000123533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035772	Mrps2	ENSMUST00000146332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042064	Myo3b	ENSMUST00000112243	ENSMUSP00000107862	TRANSLATION	protein_coding	-	-	5	1305	18	20.565	0.5	899.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000042064	Myo3b	ENSMUST00000112241	ENSMUSP00000107860	TRANSLATION	protein_coding	-	-	1	188	2	4.55	0	144.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042064	Myo3b	ENSMUST00000060208	ENSMUSP00000055362	TRANSLATION	protein_coding	-	CCDS38139.1	5	1333	18	20.565	0.5	899.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000039356	Exosc2	ENSMUST00000038474	ENSMUSP00000043519	TRANSLATION	protein_coding	-	CCDS15900.1	1	293	0	7.83	17.5	109.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000039356	Exosc2	ENSMUST00000146135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039356	Exosc2	ENSMUST00000137156	ENSMUSP00000118770	TRANSLATION	protein_coding	stop	-	5	247	0	6.33	0	109.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039356	Exosc2	ENSMUST00000192043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039356	Exosc2	ENSMUST00000125883	ENSMUSP00000141404	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	2	0	58.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039356	Exosc2	ENSMUST00000149094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074607	Tox2	ENSMUST00000165937	ENSMUSP00000126243	TRANSLATION	protein_coding	-	CCDS50790.1	5	522	0	1.75	0.5	63.1	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000074607	Tox2	ENSMUST00000109428	ENSMUSP00000105055	TRANSLATION	protein_coding	-	-	5	505	0	1.75	1.5	63.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074607	Tox2	ENSMUST00000148599	ENSMUSP00000118219	TRANSLATION	protein_coding	start	-	3	169	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074607	Tox2	ENSMUST00000099110	ENSMUSP00000096710	TRANSLATION	protein_coding	-	-	5	547	0	1.75	0	63.1	0	-3,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000074607	Tox2	ENSMUST00000128999	ENSMUSP00000122344	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026860	Sh3glb2	ENSMUST00000113620	ENSMUSP00000109250	TRANSLATION	protein_coding	-	CCDS71018.1	1	374	0	5.576	1.5	274.7	0	-4,-5	-	-	11.871	MINOR
ENSMUSG00000026860	Sh3glb2	ENSMUST00000100215	ENSMUSP00000097788	TRANSLATION	protein_coding	-	CCDS71020.1	1	400	0	5.756	7.5	268.5	0	-4,-5	-	-	14.628	ALTERNATIVE:1
ENSMUSG00000026860	Sh3glb2	ENSMUST00000163668	ENSMUSP00000131545	TRANSLATION	protein_coding	-	-	5	379	0	5.576	7.5	274.7	0	-4,-5	-	-	14.64	ALTERNATIVE:1
ENSMUSG00000026860	Sh3glb2	ENSMUST00000146400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000139963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000151354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000151145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026860	Sh3glb2	ENSMUST00000140801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000140899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000113621	ENSMUSP00000109251	TRANSLATION	protein_coding	-	CCDS84504.1	5	404	0	5.756	7.5	267	0	-4,-5	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000026860	Sh3glb2	ENSMUST00000142720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026860	Sh3glb2	ENSMUST00000142689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026860	Sh3glb2	ENSMUST00000128387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026860	Sh3glb2	ENSMUST00000028214	ENSMUSP00000028214	TRANSLATION	protein_coding	-	CCDS15879.1	1	395	0	5.756	7.5	268.5	0	-4,-5	-	-	14.628	PRINCIPAL:3
ENSMUSG00000047841	Fndc11	ENSMUST00000050026	ENSMUSP00000056320	TRANSLATION	protein_coding	-	CCDS17205.1	1	326	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000047841	Fndc11	ENSMUST00000108835	ENSMUSP00000104463	TRANSLATION	protein_coding	-	-	2	332	0	0	3.9	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000074529	Zfp972	ENSMUST00000108986	ENSMUSP00000104614	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	70.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074529	Zfp972	ENSMUST00000108934	ENSMUSP00000104562	TRANSLATION	protein_coding	-	CCDS84597.1	1	81	0	1	0.5	70.4	0	-4,-5	-	-	7.098	MINOR
ENSMUSG00000074529	Zfp972	ENSMUST00000081529	ENSMUSP00000080244	TRANSLATION	protein_coding	-	-	5	139	7	2.45	0	90.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027379	Bub1	ENSMUST00000143824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027379	Bub1	ENSMUST00000028858	ENSMUSP00000028858	TRANSLATION	protein_coding	-	CCDS50706.1	1	1059	22	10.58	0.5	194.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027379	Bub1	ENSMUST00000138624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027379	Bub1	ENSMUST00000133943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027379	Bub1	ENSMUST00000153048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027317	Ppp1r14d	ENSMUST00000076084	ENSMUSP00000075453	TRANSLATION	protein_coding	-	CCDS16596.1	1	146	0	1.408	6.3	86.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027317	Ppp1r14d	ENSMUST00000110820	ENSMUSP00000106444	TRANSLATION	protein_coding	-	CCDS71118.1	1	175	0	0.4	0.5	37.4	0	-4,-5	-	-	4.296	MINOR
ENSMUSG00000062793	Olfr1158	ENSMUST00000102622	ENSMUSP00000099682	TRANSLATION	protein_coding	-	CCDS16319.1	-	313	0	0	1.5	152.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070880	Gad1	ENSMUST00000155979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070880	Gad1	ENSMUST00000123330	ENSMUSP00000116301	TRANSLATION	protein_coding	stop	-	2	249	3	3.6	0	106.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070880	Gad1	ENSMUST00000094934	ENSMUSP00000092539	TRANSLATION	protein_coding	-	CCDS16108.1	1	593	17	12.35	3.5	504.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000070880	Gad1	ENSMUST00000130618	ENSMUSP00000117521	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070880	Gad1	ENSMUST00000130998	ENSMUSP00000119379	TRANSLATION	protein_coding	-	CCDS84535.1	1	223	3	2.6	0.5	60.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000070880	Gad1	ENSMUST00000130604	ENSMUSP00000117721	TRANSLATION	nonsense_mediated_decay	-	-	5	223	3	2.6	0.5	60.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070880	Gad1	ENSMUST00000140478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070880	Gad1	ENSMUST00000148210	ENSMUSP00000119733	TRANSLATION	protein_coding	-	CCDS84535.1	5	223	3	2.6	0.5	60.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075040	Zfp408	ENSMUST00000127702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075040	Zfp408	ENSMUST00000155045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075040	Zfp408	ENSMUST00000111333	ENSMUSP00000106965	TRANSLATION	protein_coding	-	CCDS16436.1	1	610	40	0.4	0.5	143.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000075040	Zfp408	ENSMUST00000152769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075040	Zfp408	ENSMUST00000145582	ENSMUSP00000119082	TRANSLATION	nonsense_mediated_decay	-	-	3	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075040	Zfp408	ENSMUST00000099714	ENSMUSP00000097301	TRANSLATION	protein_coding	-	CCDS84551.1	5	710	40	0.4	0.5	143.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000089953	Rnf224	ENSMUST00000205192	ENSMUSP00000145127	TRANSLATION	protein_coding	-	-	-	156	8	0.16	3.9	30.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000089953	Rnf224	ENSMUST00000091318	ENSMUSP00000145470	TRANSLATION	protein_coding	-	-	1	156	8	0.16	3.9	30.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027333	Smox	ENSMUST00000110182	ENSMUSP00000105811	TRANSLATION	protein_coding	-	CCDS50725.1	1	190	24	2.9	1.7	136.9	0	-4,-6	-	-	0.264	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000110180	ENSMUSP00000105809	TRANSLATION	protein_coding	-	CCDS50718.1	1	419	36	7.208	0.5	216.5	0	-4,-6	-	-	4.812	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000151143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027333	Smox	ENSMUST00000183881	ENSMUSP00000139111	TRANSLATION	nonsense_mediated_decay	start	-	3	68	2	0.498	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000149180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027333	Smox	ENSMUST00000110183	ENSMUSP00000105812	TRANSLATION	protein_coding	-	CCDS50724.1	1	248	29	3.758	0.5	137.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000129143	ENSMUSP00000120237	TRANSLATION	protein_coding	stop	-	3	194	21	2.56	0	108.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000151627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027333	Smox	ENSMUST00000183575	ENSMUSP00000139099	TRANSLATION	nonsense_mediated_decay	-	-	3	80	13	1.564	0	73.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000110189	ENSMUSP00000105818	TRANSLATION	protein_coding	-	CCDS50721.1	1	512	44	6.088	0.5	201.8	0	-4,-6	-	-	6.354	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000183947	ENSMUSP00000139278	TRANSLATION	nonsense_mediated_decay	-	-	1	209	23	2.758	0	108.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000110186	ENSMUSP00000105815	TRANSLATION	protein_coding	-	CCDS50719.1	1	585	43	8.068	6.3	283.1	0	-4,-6	-	-	16.526	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000028806	ENSMUSP00000028806	TRANSLATION	protein_coding	-	CCDS16763.1	1	555	43	8.568	6.3	291	0	-4,-6	-	-	18.002	PRINCIPAL:1
ENSMUSG00000027333	Smox	ENSMUST00000110179	ENSMUSP00000105808	TRANSLATION	protein_coding	-	CCDS50723.1	1	243	23	2.758	0.5	108.2	0	-4,-6	-	-	0	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000131698	ENSMUSP00000114956	TRANSLATION	protein_coding	stop	-	2	56	9	0.8	0	27.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000110181	ENSMUSP00000105810	TRANSLATION	protein_coding	-	CCDS50722.1	1	385	34	7.128	0.5	208.4	0	-4,-6	-	-	4.164	MINOR
ENSMUSG00000027333	Smox	ENSMUST00000110188	ENSMUSP00000105817	TRANSLATION	protein_coding	-	CCDS50720.1	1	536	46	6.223	0.5	203.1	0	-4,-6	-	-	8.034	MINOR
ENSMUSG00000034154	Ino80	ENSMUST00000110808	ENSMUSP00000106431	TRANSLATION	protein_coding	-	-	1	1141	3	7.61	0	233.7	0	-4,-5	-	-	5.298	MINOR
ENSMUSG00000034154	Ino80	ENSMUST00000138707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034154	Ino80	ENSMUST00000049920	ENSMUSP00000051845	TRANSLATION	protein_coding	-	CCDS16602.1	5	1559	3	10.58	3.9	296.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050211	Pla2g4e	ENSMUST00000127009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050211	Pla2g4e	ENSMUST00000152263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050211	Pla2g4e	ENSMUST00000090071	ENSMUSP00000087525	TRANSLATION	protein_coding	-	CCDS16616.1	1	875	8	13.895	0.5	187.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050211	Pla2g4e	ENSMUST00000136845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000082882	Olfr1186	ENSMUST00000216978	ENSMUSP00000151114	TRANSLATION	protein_coding	-	CCDS16339.1	5	303	0	0.36	6.4	173.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000082882	Olfr1186	ENSMUST00000121619	ENSMUSP00000149152	TRANSLATION	protein_coding	-	CCDS16339.1	-	303	0	0.36	6.4	173.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000082882	Olfr1186	ENSMUST00000215912	ENSMUSP00000150826	TRANSLATION	protein_coding	-	CCDS16339.1	5	303	0	0.36	6.4	173.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000089917	Uckl1	ENSMUST00000136875	ENSMUSP00000114821	TRANSLATION	protein_coding	stop	-	5	235	17	3.53	0	155.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000146823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000057816	ENSMUSP00000050398	TRANSLATION	protein_coding	-	CCDS17216.1	1	548	36	10.324	0.5	444.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000089917	Uckl1	ENSMUST00000131949	ENSMUSP00000118872	TRANSLATION	protein_coding	stop	-	3	16	0	0.28	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000144856	ENSMUSP00000114982	TRANSLATION	protein_coding	start/stop	-	3	253	18	4.03	0	179.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000134340	ENSMUSP00000122098	TRANSLATION	protein_coding	start	-	5	198	18	4.43	0	200.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000156998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089917	Uckl1	ENSMUST00000136997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000149332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000154613	ENSMUSP00000120302	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	0.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000130893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000142296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089917	Uckl1	ENSMUST00000156308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000155182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000129469	ENSMUSP00000121607	TRANSLATION	nonsense_mediated_decay	-	-	5	339	18	5.19	0	200.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089917	Uckl1	ENSMUST00000138408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000142491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089917	Uckl1	ENSMUST00000124315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075079	Olfr1249	ENSMUST00000216124	ENSMUSP00000149072	TRANSLATION	protein_coding	-	CCDS16388.1	5	318	0	0.36	1.5	159.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075079	Olfr1249	ENSMUST00000099769	ENSMUSP00000097357	TRANSLATION	protein_coding	-	CCDS16388.1	-	318	0	0.36	1.5	159.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075141	Olfr1160	ENSMUST00000099839	ENSMUSP00000097427	TRANSLATION	protein_coding	-	CCDS16320.1	-	319	0	0	0.5	156	7	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000075141	Olfr1160	ENSMUST00000215457	ENSMUSP00000148857	TRANSLATION	protein_coding	-	-	5	310	0	0	2.7	156	7	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000090792	ENSMUSP00000088298	TRANSLATION	protein_coding	-	CCDS16149.1	5	379	0	4.8	2.7	180.2	0	-4,-5	-	-	11.976	PRINCIPAL:3
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000132392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000141974	ENSMUSP00000116125	TRANSLATION	protein_coding	start	-	2	194	0	1.8	0	62.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000164947	ENSMUSP00000126069	TRANSLATION	protein_coding	-	CCDS50610.1	5	357	0	4.8	2.7	180.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000111962	ENSMUSP00000107593	TRANSLATION	protein_coding	-	CCDS50610.1	1	357	0	4.8	2.7	180.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000111961	ENSMUSP00000107592	TRANSLATION	protein_coding	-	-	1	318	0	4.8	0	180.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000059005	Hnrnpa3	ENSMUST00000111964	ENSMUSP00000107595	TRANSLATION	protein_coding	-	CCDS16149.1	1	379	0	4.8	2.7	180.2	0	-4,-5	-	-	11.976	PRINCIPAL:3
ENSMUSG00000026650	Meig1	ENSMUST00000144584	ENSMUSP00000123118	TRANSLATION	protein_coding	stop	-	3	65	0	1.5	0	92.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026650	Meig1	ENSMUST00000115084	ENSMUSP00000110736	TRANSLATION	protein_coding	-	CCDS38038.1	2	88	0	2.25	9.8	134.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026650	Meig1	ENSMUST00000115082	ENSMUSP00000110734	TRANSLATION	protein_coding	-	CCDS38038.1	1	88	0	2.25	9.8	134.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026650	Meig1	ENSMUST00000115083	ENSMUSP00000110735	TRANSLATION	protein_coding	-	CCDS38038.1	2	88	0	2.25	9.8	134.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026650	Meig1	ENSMUST00000115081	ENSMUSP00000110733	TRANSLATION	protein_coding	-	CCDS38038.1	5	88	0	2.25	9.8	134.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026650	Meig1	ENSMUST00000064685	ENSMUSP00000070310	TRANSLATION	protein_coding	-	CCDS38038.1	1	88	0	2.25	9.8	134.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000009876	Cox4i2	ENSMUST00000109821	ENSMUSP00000105446	TRANSLATION	protein_coding	-	CCDS16898.1	1	172	0	3.16	1.5	170.8	1	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000009876	Cox4i2	ENSMUST00000010020	ENSMUSP00000010020	TRANSLATION	protein_coding	-	CCDS16898.1	1	172	0	3.16	1.5	170.8	1	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000035000	Dpp4	ENSMUST00000129738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035000	Dpp4	ENSMUST00000151818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035000	Dpp4	ENSMUST00000149306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035000	Dpp4	ENSMUST00000156871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035000	Dpp4	ENSMUST00000047812	ENSMUSP00000044050	TRANSLATION	protein_coding	-	CCDS16065.1	1	760	3	19.975	0.5	559.6	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035000	Dpp4	ENSMUST00000150979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079043	Fastkd5	ENSMUST00000110262	ENSMUSP00000105891	TRANSLATION	protein_coding	-	-	2	762	0	0	0	191	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000079043	Fastkd5	ENSMUST00000179273	ENSMUSP00000137385	TRANSLATION	protein_coding	-	CCDS50713.1	-	807	0	0	0.5	191	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000094475	Gm11007	ENSMUST00000177700	ENSMUSP00000136514	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000094475	Gm11007	ENSMUST00000185834	ENSMUSP00000139544	TRANSLATION	protein_coding	start	-	5	497	59	2.05	0.5	394.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094475	Gm11007	ENSMUST00000178120	ENSMUSP00000136499	TRANSLATION	protein_coding	-	-	5	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068814	Olfr1145	ENSMUST00000079711	ENSMUSP00000078649	TRANSLATION	protein_coding	-	-	-	314	0	0.36	1.5	193.1	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000068814	Olfr1145	ENSMUST00000090707	ENSMUSP00000088209	TRANSLATION	protein_coding	-	CCDS16310.1	-	325	0	0.36	0.5	193.1	5	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000027132	Katnbl1	ENSMUST00000151257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027132	Katnbl1	ENSMUST00000028552	ENSMUSP00000028552	TRANSLATION	protein_coding	-	CCDS16554.1	1	299	0	0	1.5	141.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035109	Shc4	ENSMUST00000042246	ENSMUSP00000043146	TRANSLATION	protein_coding	-	CCDS16678.1	1	626	0	6.95	3.9	204.6	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000035109	Shc4	ENSMUST00000157002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035109	Shc4	ENSMUST00000110480	ENSMUSP00000106106	TRANSLATION	protein_coding	-	-	1	340	0	4.12	0	120.8	0	-4,-5	-	-	1.314	MINOR
ENSMUSG00000035109	Shc4	ENSMUST00000110477	ENSMUSP00000106103	TRANSLATION	protein_coding	-	-	1	340	0	4.12	0	120.8	0	-4,-5	-	-	1.314	MINOR
ENSMUSG00000027177	Hipk3	ENSMUST00000132622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027177	Hipk3	ENSMUST00000111124	ENSMUSP00000106753	TRANSLATION	protein_coding	-	CCDS16489.1	5	1192	15	2.815	6.3	164.5	0	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000027177	Hipk3	ENSMUST00000028600	ENSMUSP00000028600	TRANSLATION	protein_coding	-	CCDS16489.1	1	1192	15	2.815	6.3	164.5	0	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000027177	Hipk3	ENSMUST00000111125	ENSMUSP00000106754	TRANSLATION	protein_coding	-	-	5	1213	15	2.815	5.8	164.5	0	-4,-6	-	-	19.812	ALTERNATIVE:1
ENSMUSG00000026895	Ndufa8	ENSMUST00000070112	ENSMUSP00000065352	TRANSLATION	protein_coding	-	CCDS15967.1	1	172	0	3.5	16.2	31	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026869	Psmd5	ENSMUST00000189715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026869	Psmd5	ENSMUST00000028225	ENSMUSP00000028225	TRANSLATION	protein_coding	-	CCDS15953.1	1	504	0	0	8.8	657.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000026869	Psmd5	ENSMUST00000143456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026869	Psmd5	ENSMUST00000202917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026869	Psmd5	ENSMUST00000135575	ENSMUSP00000116880	TRANSLATION	protein_coding	start	-	3	140	0	0	0	112.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016253	Nelfcd	ENSMUST00000016397	ENSMUSP00000016397	TRANSLATION	protein_coding	-	-	1	607	0	9.33	0	922.2	0	-4,-5	-	-	10.596	MINOR
ENSMUSG00000016253	Nelfcd	ENSMUST00000129716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016253	Nelfcd	ENSMUST00000143683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016253	Nelfcd	ENSMUST00000109075	ENSMUSP00000104703	TRANSLATION	protein_coding	-	CCDS38358.1	1	591	0	9.33	3.9	945.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000016253	Nelfcd	ENSMUST00000137986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016253	Nelfcd	ENSMUST00000139390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074681	Defb23	ENSMUST00000099206	ENSMUSP00000096812	TRANSLATION	protein_coding	-	CCDS16886.1	1	166	0	0	1.5	24.2	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000075086	Olfr1241	ENSMUST00000215055	ENSMUSP00000149914	TRANSLATION	protein_coding	-	CCDS16381.1	5	314	0	0.36	2.7	157.5	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075086	Olfr1241	ENSMUST00000099778	ENSMUSP00000097366	TRANSLATION	protein_coding	-	CCDS16381.1	-	314	0	0.36	2.7	157.5	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075086	Olfr1241	ENSMUST00000214743	ENSMUSP00000149997	TRANSLATION	protein_coding	-	CCDS16381.1	5	314	0	0.36	2.7	157.5	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074736	Syndig1	ENSMUST00000109935	ENSMUSP00000105561	TRANSLATION	protein_coding	-	CCDS38262.1	5	258	0	0	7.5	67.4	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000074736	Syndig1	ENSMUST00000149705	ENSMUSP00000122327	TRANSLATION	protein_coding	stop	-	2	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074736	Syndig1	ENSMUST00000137280	ENSMUSP00000122838	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074736	Syndig1	ENSMUST00000109934	ENSMUSP00000105560	TRANSLATION	protein_coding	-	CCDS38262.1	5	258	0	0	7.5	67.4	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000074736	Syndig1	ENSMUST00000140870	ENSMUSP00000114499	TRANSLATION	protein_coding	stop	-	2	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074736	Syndig1	ENSMUST00000144179	ENSMUSP00000116877	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053141	Ptprt	ENSMUST00000109442	ENSMUSP00000105068	TRANSLATION	protein_coding	-	-	5	1454	26	23.92	0.5	662.4	3	1,-3	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000053141	Ptprt	ENSMUST00000109445	ENSMUSP00000105071	TRANSLATION	protein_coding	-	CCDS17001.1	1	1435	26	24.17	0.5	662.4	3	1,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000053141	Ptprt	ENSMUST00000109443	ENSMUSP00000105069	TRANSLATION	protein_coding	-	CCDS71183.1	1	1445	26	24.17	0.5	662.4	3	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000053141	Ptprt	ENSMUST00000129015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053141	Ptprt	ENSMUST00000153770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053141	Ptprt	ENSMUST00000109441	ENSMUSP00000105067	TRANSLATION	protein_coding	-	CCDS71182.1	1	1455	25	23.795	0.5	647.7	3	1,-3	-	-	15.702	MINOR
ENSMUSG00000063507	Gm1330	ENSMUST00000081553	ENSMUSP00000080268	TRANSLATION	protein_coding	-	-	5	157	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000063507	Gm1330	ENSMUST00000109942	ENSMUSP00000105568	TRANSLATION	protein_coding	-	-	5	184	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:5
ENSMUSG00000039496	Cdnf	ENSMUST00000132566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039496	Cdnf	ENSMUST00000036350	ENSMUSP00000046297	TRANSLATION	protein_coding	-	CCDS15654.1	1	187	0	3.6	7.5	225	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000039496	Cdnf	ENSMUST00000140610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051817	Sox12	ENSMUST00000063332	ENSMUSP00000064250	TRANSLATION	protein_coding	-	CCDS38274.1	2	314	0	0.6	6.3	87.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051817	Sox12	ENSMUST00000182625	ENSMUSP00000138293	TRANSLATION	protein_coding	-	CCDS38274.1	-	314	0	0.6	6.3	87.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027160	Ccdc34	ENSMUST00000028580	ENSMUSP00000028580	TRANSLATION	protein_coding	-	CCDS50655.1	1	367	0	0	0.5	176	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000027160	Ccdc34	ENSMUST00000078939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027160	Ccdc34	ENSMUST00000126990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027160	Ccdc34	ENSMUST00000150183	ENSMUSP00000127363	TRANSLATION	protein_coding	start	-	1	140	0	0	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027160	Ccdc34	ENSMUST00000127630	ENSMUSP00000130554	TRANSLATION	nonsense_mediated_decay	start	-	2	184	0	0	0	72.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027160	Ccdc34	ENSMUST00000155110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027160	Ccdc34	ENSMUST00000152930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027427	Polr3f	ENSMUST00000152311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027427	Polr3f	ENSMUST00000028914	ENSMUSP00000028914	TRANSLATION	protein_coding	-	CCDS16820.1	1	316	0	5.35	11.8	353.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027427	Polr3f	ENSMUST00000110017	ENSMUSP00000105644	TRANSLATION	protein_coding	-	-	1	141	0	3.25	0	79.2	0	-4,-5	-	-	1.8	MINOR
ENSMUSG00000027427	Polr3f	ENSMUST00000155567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027427	Polr3f	ENSMUST00000143292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027427	Polr3f	ENSMUST00000136999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027427	Polr3f	ENSMUST00000134051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001819	Hoxd13	ENSMUST00000001872	ENSMUSP00000001872	TRANSLATION	protein_coding	-	CCDS16139.1	1	339	0	1	0.5	120.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027479	Mapre1	ENSMUST00000123795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027479	Mapre1	ENSMUST00000028981	ENSMUSP00000028981	TRANSLATION	protein_coding	-	CCDS16917.1	1	268	3	5.5	3.7	114.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000027479	Mapre1	ENSMUST00000123570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017950	Hnf4a	ENSMUST00000131658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017950	Hnf4a	ENSMUST00000143911	ENSMUSP00000119479	TRANSLATION	protein_coding	stop	-	1	100	8	2.05	0	98	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017950	Hnf4a	ENSMUST00000109411	ENSMUSP00000105038	TRANSLATION	protein_coding	-	-	1	465	8	7.68	0	242	0	-4,-5	-	-	18	MINOR
ENSMUSG00000017950	Hnf4a	ENSMUST00000018094	ENSMUSP00000018094	TRANSLATION	protein_coding	-	CCDS17012.1	1	474	8	7.68	7.6	242	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000017950	Hnf4a	ENSMUST00000137449	ENSMUSP00000123511	TRANSLATION	protein_coding	stop	-	3	191	8	4.08	0	131.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069495	Epc2	ENSMUST00000092123	ENSMUSP00000089758	TRANSLATION	protein_coding	-	CCDS16023.1	1	808	0	2.518	9.6	282.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000069495	Epc2	ENSMUST00000152485	ENSMUSP00000119134	TRANSLATION	protein_coding	start/stop	-	3	250	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026965	Anapc2	ENSMUST00000129300	ENSMUSP00000115177	TRANSLATION	protein_coding	start/stop	-	5	185	0	3.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026965	Anapc2	ENSMUST00000129265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026965	Anapc2	ENSMUST00000028341	ENSMUSP00000028341	TRANSLATION	protein_coding	-	CCDS15761.1	1	837	0	14.25	0.5	176.6	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000026965	Anapc2	ENSMUST00000125885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027661	Slc2a10	ENSMUST00000148463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027661	Slc2a10	ENSMUST00000029196	ENSMUSP00000029196	TRANSLATION	protein_coding	-	CCDS17083.1	1	536	0	0.42	1.5	252.3	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000826	Dnajc5	ENSMUST00000108796	ENSMUSP00000104424	TRANSLATION	protein_coding	-	CCDS17215.1	5	198	0	2	13.6	96	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000000826	Dnajc5	ENSMUST00000108797	ENSMUSP00000104425	TRANSLATION	protein_coding	-	CCDS17215.1	1	198	0	2	13.6	96	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000000826	Dnajc5	ENSMUST00000116365	ENSMUSP00000112066	TRANSLATION	nonsense_mediated_decay	-	-	1	167	0	2	1.2	96	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000826	Dnajc5	ENSMUST00000072334	ENSMUSP00000072175	TRANSLATION	protein_coding	-	CCDS17215.1	1	198	0	2	13.6	96	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000000826	Dnajc5	ENSMUST00000152578	ENSMUSP00000116120	TRANSLATION	protein_coding	stop	-	3	141	0	2	0	96	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000826	Dnajc5	ENSMUST00000141523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027359	Slc27a2	ENSMUST00000150947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027359	Slc27a2	ENSMUST00000061491	ENSMUSP00000057595	TRANSLATION	protein_coding	-	CCDS16683.1	1	620	22	5.6	5.3	260.6	1	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000027359	Slc27a2	ENSMUST00000141482	ENSMUSP00000117145	TRANSLATION	protein_coding	-	-	5	484	22	5.12	0	169.1	1	-4,-7	-	-	11.55	MINOR
ENSMUSG00000027359	Slc27a2	ENSMUST00000126249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075150	Olfr1137	ENSMUST00000099850	ENSMUSP00000097437	TRANSLATION	protein_coding	-	CCDS16304.1	-	310	0	0.2	0.5	154.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075150	Olfr1137	ENSMUST00000214209	ENSMUSP00000149311	TRANSLATION	protein_coding	-	CCDS16304.1	5	310	0	0.2	0.5	154.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027386	Fbln7	ENSMUST00000110324	ENSMUSP00000105953	TRANSLATION	protein_coding	-	CCDS38235.1	5	440	30	3.8	5.1	160.4	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000027386	Fbln7	ENSMUST00000028864	ENSMUSP00000028864	TRANSLATION	protein_coding	-	CCDS38235.1	1	440	30	3.8	5.1	160.4	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000026872	Zeb2	ENSMUST00000126743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000202432	ENSMUSP00000144197	TRANSLATION	protein_coding	start/stop	-	5	80	3	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000202935	ENSMUSP00000143841	TRANSLATION	protein_coding	stop	-	5	113	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000145529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026872	Zeb2	ENSMUST00000201298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000028229	ENSMUSP00000028229	TRANSLATION	protein_coding	-	-	1	1259	29	3.708	0.5	117.1	0	-4,-5	-	-	18	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000201211	ENSMUSP00000144406	TRANSLATION	protein_coding	stop	-	5	184	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000202345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000124942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000176438	ENSMUSP00000134849	TRANSLATION	protein_coding	-	CCDS16020.1	5	1215	29	3.708	7.1	117.1	0	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000026872	Zeb2	ENSMUST00000202187	ENSMUSP00000144552	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000076836	ENSMUSP00000076111	TRANSLATION	protein_coding	-	-	5	1214	29	3.708	7.1	117.1	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000026872	Zeb2	ENSMUST00000201804	ENSMUSP00000144637	TRANSLATION	protein_coding	stop	-	5	731	18	2.908	0	100.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000238346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000201623	ENSMUSP00000144075	TRANSLATION	protein_coding	stop	-	5	214	4	0.95	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000201490	ENSMUSP00000143976	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000176732	ENSMUSP00000135393	TRANSLATION	protein_coding	-	-	5	220	12	2.708	0	62.9	0	-4,-6	-	-	6.75	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000200844	ENSMUSP00000144421	TRANSLATION	protein_coding	-	-	5	1191	29	3.708	2.4	117.1	0	-4,-6	-	-	18.69	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000202371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026872	Zeb2	ENSMUST00000209076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000131635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000123037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026872	Zeb2	ENSMUST00000153561	ENSMUSP00000135491	TRANSLATION	protein_coding	-	-	1	37	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000127520	ENSMUSP00000120130	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026872	Zeb2	ENSMUST00000201982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000177302	ENSMUSP00000134747	TRANSLATION	protein_coding	-	CCDS16020.1	1	1215	29	3.708	7.1	117.1	0	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000026872	Zeb2	ENSMUST00000068415	ENSMUSP00000069685	TRANSLATION	protein_coding	-	CCDS16020.1	1	1215	29	3.708	7.1	117.1	0	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000026872	Zeb2	ENSMUST00000201413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000152232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026872	Zeb2	ENSMUST00000201969	ENSMUSP00000144141	TRANSLATION	protein_coding	stop	-	5	141	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000087679	Tmem250-ps	ENSMUST00000163836	ENSMUSP00000158791	TRANSLATION	protein_coding	-	-	-	139	0	0	18.3	0	2	-4,-1	-	-	4	PRINCIPAL:1
ENSMUSG00000087679	Tmem250-ps	ENSMUST00000133808	ENSMUSP00000158596	TRANSLATION	protein_coding	-	-	2	139	0	0	18.3	0	2	-4,-1	-	-	4	PRINCIPAL:1
ENSMUSG00000090077	Lime1	ENSMUST00000140943	ENSMUSP00000117558	TRANSLATION	protein_coding	start/stop	-	2	189	0	0	0	236.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090077	Lime1	ENSMUST00000126611	ENSMUSP00000119181	TRANSLATION	protein_coding	start	-	1	249	0	0	0	356.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090077	Lime1	ENSMUST00000108804	ENSMUSP00000104432	TRANSLATION	protein_coding	-	-	3	87	3	0	0	90.7	0	3,-2	-	-	3	MINOR
ENSMUSG00000090077	Lime1	ENSMUST00000048077	ENSMUSP00000045010	TRANSLATION	protein_coding	-	CCDS17211.1	1	269	3	0	1.5	362.2	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000090077	Lime1	ENSMUST00000184328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090077	Lime1	ENSMUST00000126733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090077	Lime1	ENSMUST00000126862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026761	Orc4	ENSMUST00000128618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000123789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000156956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000123271	ENSMUSP00000117732	TRANSLATION	protein_coding	stop	-	5	49	3	1.38	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026761	Orc4	ENSMUST00000154784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000150492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000141441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000123809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000028098	ENSMUSP00000028098	TRANSLATION	protein_coding	-	CCDS16022.1	1	433	14	10.98	5.1	237.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000026761	Orc4	ENSMUST00000149679	ENSMUSP00000121114	TRANSLATION	protein_coding	stop	-	2	72	9	2.13	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026761	Orc4	ENSMUST00000142851	ENSMUSP00000119274	TRANSLATION	protein_coding	stop	-	5	237	12	5.98	0	69.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026761	Orc4	ENSMUST00000153150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026761	Orc4	ENSMUST00000090976	ENSMUSP00000088497	TRANSLATION	protein_coding	-	CCDS50582.1	1	138	10	3.48	0.5	20.2	0	-4,-2	-	-	3.336	MINOR
ENSMUSG00000039501	Znfx1	ENSMUST00000135967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039501	Znfx1	ENSMUST00000155281	ENSMUSP00000121750	TRANSLATION	protein_coding	stop	-	1	869	9	0.78	0	54.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039501	Znfx1	ENSMUST00000048988	ENSMUSP00000049404	TRANSLATION	protein_coding	-	CCDS38337.1	1	1909	9	3.3	1.5	249.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000039501	Znfx1	ENSMUST00000067584	ENSMUSP00000072867	TRANSLATION	protein_coding	-	CCDS71198.1	1	1045	0	2.52	0.5	196.2	0	1,-2	-	-	7.248	MINOR
ENSMUSG00000039501	Znfx1	ENSMUST00000128676	ENSMUSP00000121598	TRANSLATION	protein_coding	stop	-	1	840	9	0.78	0	54.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017009	Sdc4	ENSMUST00000142909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017009	Sdc4	ENSMUST00000017153	ENSMUSP00000017153	TRANSLATION	protein_coding	-	CCDS17036.1	1	198	0	0	0.5	88.8	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027360	Hdc	ENSMUST00000124396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027360	Hdc	ENSMUST00000028838	ENSMUSP00000028838	TRANSLATION	protein_coding	-	CCDS16684.1	1	662	14	10.55	0.5	568.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027360	Hdc	ENSMUST00000138752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027360	Hdc	ENSMUST00000148591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027360	Hdc	ENSMUST00000132382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046338	Gpat2	ENSMUST00000062211	ENSMUSP00000049619	TRANSLATION	protein_coding	-	CCDS38232.2	5	801	0	0	2.7	28.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000051747	Ttn	ENSMUST00000130915	ENSMUSP00000115190	TRANSLATION	protein_coding	start/stop	-	5	629	0	1.6	0	112.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000111846	ENSMUSP00000107477	TRANSLATION	protein_coding	-	CCDS38154.1	5	33467	0	67.815	0	15607.1	0	-4,-7	-	-	5.58	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000147048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051747	Ttn	ENSMUST00000149616	ENSMUSP00000123202	TRANSLATION	protein_coding	start/stop	-	5	544	0	1.6	0	52	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000150741	ENSMUSP00000117534	TRANSLATION	protein_coding	start/stop	-	5	150	0	0	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000151097	ENSMUSP00000118209	TRANSLATION	protein_coding	start/stop	-	5	153	0	0	0	58.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000011934	ENSMUSP00000011934	TRANSLATION	protein_coding	-	-	5	26938	0	30.995	0	11855.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000111882	ENSMUSP00000107513	TRANSLATION	protein_coding	-	-	5	33467	0	67.815	0	15607.1	0	-4,-7	-	-	5.58	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000152185	ENSMUSP00000118492	TRANSLATION	protein_coding	start/stop	-	5	710	0	1.6	0	109.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000148747	ENSMUSP00000117447	TRANSLATION	protein_coding	start/stop	-	5	3409	0	22.74	0	1954.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000128071	ENSMUSP00000118602	TRANSLATION	protein_coding	start/stop	-	5	1054	0	1.6	0	190.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000142251	ENSMUSP00000119894	TRANSLATION	protein_coding	start/stop	-	5	248	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000155365	ENSMUSP00000121095	TRANSLATION	protein_coding	start/stop	-	5	679	0	1.6	0	138.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000099981	ENSMUSP00000097561	TRANSLATION	protein_coding	-	-	5	35390	0	68.025	0	16043.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051747	Ttn	ENSMUST00000123448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051747	Ttn	ENSMUST00000140091	ENSMUSP00000122470	TRANSLATION	protein_coding	stop	-	1	645	0	3.3	0	361.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000156257	ENSMUSP00000114666	TRANSLATION	protein_coding	start/stop	-	3	91	0	0	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000137854	ENSMUSP00000117059	TRANSLATION	protein_coding	start/stop	-	5	203	0	0	0	22.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000126515	ENSMUSP00000119089	TRANSLATION	protein_coding	start/stop	-	5	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000099980	ENSMUSP00000097560	TRANSLATION	protein_coding	-	-	5	5508	0	19.835	0	1770.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000139832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051747	Ttn	ENSMUST00000134720	ENSMUSP00000116594	TRANSLATION	protein_coding	start/stop	-	5	8272	0	40.065	0	4182.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000138542	ENSMUSP00000116031	TRANSLATION	protein_coding	start/stop	-	1	1135	0	3.2	0	251.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051747	Ttn	ENSMUST00000123804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051747	Ttn	ENSMUST00000190813	ENSMUSP00000140714	TRANSLATION	protein_coding	start/stop	-	5	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067998	Bpifb9a	ENSMUST00000126084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067998	Bpifb9a	ENSMUST00000147299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067998	Bpifb9a	ENSMUST00000088924	ENSMUSP00000086314	TRANSLATION	protein_coding	-	CCDS50761.1	1	591	0	0	0.5	33.1	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000023391	Dlx2	ENSMUST00000134249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023391	Dlx2	ENSMUST00000024159	ENSMUSP00000024159	TRANSLATION	protein_coding	-	CCDS16117.1	1	332	0	1.2	1.5	142.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037885	Stk35	ENSMUST00000166282	ENSMUSP00000132862	TRANSLATION	protein_coding	-	CCDS16731.2	1	327	9	0.47	0.5	34.9	0	-4,-7	-	-	4.812	MINOR
ENSMUSG00000037885	Stk35	ENSMUST00000165413	ENSMUSP00000126541	TRANSLATION	protein_coding	-	CCDS16732.2	1	539	17	0.68	0.5	169.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027514	Zbp1	ENSMUST00000109116	ENSMUSP00000104744	TRANSLATION	protein_coding	-	CCDS50813.1	1	187	0	2.3	0.5	49.4	0	-4,-5	-	-	9.582	MINOR
ENSMUSG00000027514	Zbp1	ENSMUST00000146802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027514	Zbp1	ENSMUST00000029018	ENSMUSP00000029018	TRANSLATION	protein_coding	-	CCDS17142.1	1	411	0	2.3	0.5	82.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074627	Mroh8	ENSMUST00000141081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074627	Mroh8	ENSMUST00000150035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074627	Mroh8	ENSMUST00000147602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074627	Mroh8	ENSMUST00000143663	ENSMUSP00000124362	TRANSLATION	protein_coding	-	CCDS38303.2	1	1049	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074627	Mroh8	ENSMUST00000146848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026723	Trdmt1	ENSMUST00000124488	ENSMUSP00000114572	TRANSLATION	protein_coding	-	CCDS15695.1	1	415	19	8.36	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026723	Trdmt1	ENSMUST00000144957	ENSMUSP00000141758	TRANSLATION	nonsense_mediated_decay	-	-	5	84	15	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026723	Trdmt1	ENSMUST00000028055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027618	Nfs1	ENSMUST00000029147	ENSMUSP00000029147	TRANSLATION	protein_coding	-	CCDS16962.1	1	459	13	11.3	1.5	309.9	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000027618	Nfs1	ENSMUST00000109600	ENSMUSP00000105229	TRANSLATION	protein_coding	-	-	1	148	0	1.8	0	38	0	-2,2	-	-	0	MINOR
ENSMUSG00000027618	Nfs1	ENSMUST00000184469	ENSMUSP00000139294	TRANSLATION	protein_coding	start	-	5	141	7	1.75	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027618	Nfs1	ENSMUST00000125449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027398	Il1b	ENSMUST00000141979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027398	Il1b	ENSMUST00000028881	ENSMUSP00000028881	TRANSLATION	protein_coding	-	CCDS16726.1	1	269	0	3	1.5	269.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027398	Il1b	ENSMUST00000155994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048197	Olfr1153	ENSMUST00000052300	ENSMUSP00000057839	TRANSLATION	protein_coding	-	CCDS16314.1	-	318	0	0.2	1.5	150.8	6	-4,-6	-	-	12.188	MINOR
ENSMUSG00000048197	Olfr1153	ENSMUST00000217436	ENSMUSP00000150945	TRANSLATION	protein_coding	-	-	5	310	0	0.2	6.3	150.8	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053702	Nebl	ENSMUST00000145545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053702	Nebl	ENSMUST00000124611	ENSMUSP00000116065	TRANSLATION	protein_coding	start/stop	-	3	131	0	0.76	0	49	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000028080	ENSMUSP00000028080	TRANSLATION	protein_coding	-	CCDS15706.1	1	270	7	3.39	9.8	192.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000053702	Nebl	ENSMUST00000177966	ENSMUSP00000137567	TRANSLATION	protein_coding	-	-	1	120	0	0	0	83.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000150194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053702	Nebl	ENSMUST00000137253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053702	Nebl	ENSMUST00000138241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053702	Nebl	ENSMUST00000131957	ENSMUSP00000118525	TRANSLATION	protein_coding	-	-	1	526	0	0	0	225.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000132418	ENSMUSP00000122024	TRANSLATION	protein_coding	-	-	1	452	0	0	0	147.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000127912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053702	Nebl	ENSMUST00000124270	ENSMUSP00000117805	TRANSLATION	protein_coding	-	-	5	1014	0	2.3	4.6	492.4	0	-4,-5	-	-	11.049	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000145492	ENSMUSP00000121313	TRANSLATION	protein_coding	stop	-	1	447	0	0	0	173.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053702	Nebl	ENSMUST00000130725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042459	Bpifa2	ENSMUST00000136467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042459	Bpifa2	ENSMUST00000132933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042459	Bpifa2	ENSMUST00000145388	ENSMUSP00000115384	TRANSLATION	protein_coding	stop	-	3	211	0	1.57	0	113.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000042459	Bpifa2	ENSMUST00000048103	ENSMUSP00000046080	TRANSLATION	protein_coding	-	CCDS16923.1	1	235	0	1.702	1.5	117.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000070719	Pla2g4d	ENSMUST00000094665	ENSMUSP00000092252	TRANSLATION	protein_coding	-	CCDS16617.1	1	825	8	17.55	1.5	180.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000017767	Spata25	ENSMUST00000141411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017767	Spata25	ENSMUST00000017911	ENSMUSP00000017911	TRANSLATION	protein_coding	-	CCDS50799.1	1	226	0	0	1.5	443.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026937	Lcn5	ENSMUST00000100313	ENSMUSP00000097888	TRANSLATION	protein_coding	-	CCDS38078.1	1	180	7	4.39	0.5	75.8	0	4,-1	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000026937	Lcn5	ENSMUST00000143401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026937	Lcn5	ENSMUST00000028306	ENSMUSP00000028306	TRANSLATION	protein_coding	-	CCDS38079.1	1	192	7	4.72	0.5	75.8	0	4,-1	-	-	18	PRINCIPAL:4
ENSMUSG00000026937	Lcn5	ENSMUST00000100312	ENSMUSP00000097887	TRANSLATION	protein_coding	-	CCDS71003.1	1	192	7	4.522	0.5	75.8	0	4,-1	-	-	17.604	ALTERNATIVE:2
ENSMUSG00000027120	Fshb	ENSMUST00000028533	ENSMUSP00000028533	TRANSLATION	protein_coding	-	CCDS16504.1	1	130	0	2	7.6	120.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027189	Trim44	ENSMUST00000152929	ENSMUSP00000116958	TRANSLATION	protein_coding	start/stop	-	2	172	8	0.8	0	40	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027189	Trim44	ENSMUST00000144110	ENSMUSP00000119847	TRANSLATION	protein_coding	stop	-	3	87	0	0.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027189	Trim44	ENSMUST00000102573	ENSMUSP00000099633	TRANSLATION	protein_coding	-	CCDS16466.1	1	345	15	1.158	1.5	40	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027400	Pdyn	ENSMUST00000028883	ENSMUSP00000028883	TRANSLATION	protein_coding	-	CCDS38239.1	1	248	0	0	1.5	63.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000027400	Pdyn	ENSMUST00000152113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027400	Pdyn	ENSMUST00000130608	ENSMUSP00000114534	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	63.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039913	Pak7	ENSMUST00000035264	ENSMUSP00000047285	TRANSLATION	protein_coding	-	CCDS16790.1	1	719	19	6	6.3	287.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000039913	Pak7	ENSMUST00000077200	ENSMUSP00000076440	TRANSLATION	protein_coding	-	CCDS16790.1	1	719	19	6	6.3	287.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000039913	Pak7	ENSMUST00000143329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027249	F2	ENSMUST00000153182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027249	F2	ENSMUST00000028681	ENSMUSP00000028681	TRANSLATION	protein_coding	-	CCDS16434.1	1	618	10	11.38	1.5	539.3	0	2,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000027249	F2	ENSMUST00000111335	ENSMUSP00000106967	TRANSLATION	protein_coding	-	-	5	617	10	11.38	1.5	539.3	0	2,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000074519	Zfp971	ENSMUST00000108925	ENSMUSP00000104553	TRANSLATION	protein_coding	-	CCDS50835.1	1	64	0	1.45	1.5	74	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000074519	Zfp971	ENSMUST00000108926	ENSMUSP00000104554	TRANSLATION	protein_coding	-	CCDS50834.1	3	470	54	2.05	0.5	345.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046971	Pla2g4f	ENSMUST00000054651	ENSMUSP00000062607	TRANSLATION	protein_coding	-	CCDS16618.1	1	855	8	13.14	0.5	160.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000046971	Pla2g4f	ENSMUST00000142183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075219	Olfr994	ENSMUST00000099925	ENSMUSP00000097509	TRANSLATION	protein_coding	-	CCDS16207.1	-	314	0	0.2	1.5	162.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075219	Olfr994	ENSMUST00000217218	ENSMUSP00000149417	TRANSLATION	protein_coding	-	CCDS16207.1	3	314	0	0.2	1.5	162.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075219	Olfr994	ENSMUST00000215758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075219	Olfr994	ENSMUST00000214679	ENSMUSP00000151122	TRANSLATION	protein_coding	-	CCDS16207.1	5	314	0	0.2	1.5	162.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043909	Trp53bp1	ENSMUST00000147540	ENSMUSP00000119793	TRANSLATION	nonsense_mediated_decay	start	-	5	190	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043909	Trp53bp1	ENSMUST00000140582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000124031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000135890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000131426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043909	Trp53bp1	ENSMUST00000142400	ENSMUSP00000119425	TRANSLATION	protein_coding	start	-	2	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043909	Trp53bp1	ENSMUST00000124554	ENSMUSP00000122629	TRANSLATION	nonsense_mediated_decay	start	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043909	Trp53bp1	ENSMUST00000124060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043909	Trp53bp1	ENSMUST00000132812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000124411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043909	Trp53bp1	ENSMUST00000110647	ENSMUSP00000106277	TRANSLATION	protein_coding	-	CCDS71125.1	1	1919	0	8.15	0.5	255.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000043909	Trp53bp1	ENSMUST00000136617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000140285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043909	Trp53bp1	ENSMUST00000147554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043909	Trp53bp1	ENSMUST00000156493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043909	Trp53bp1	ENSMUST00000129752	ENSMUSP00000120451	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043909	Trp53bp1	ENSMUST00000154426	ENSMUSP00000117548	TRANSLATION	nonsense_mediated_decay	start	-	5	166	0	2.15	0	139.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043909	Trp53bp1	ENSMUST00000110648	ENSMUSP00000106278	TRANSLATION	protein_coding	-	CCDS50684.1	5	1969	0	8.15	0.5	255.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000043909	Trp53bp1	ENSMUST00000131245	ENSMUSP00000114457	TRANSLATION	protein_coding	stop	-	1	1018	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027605	Acss2	ENSMUST00000149788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027605	Acss2	ENSMUST00000133654	ENSMUSP00000116501	TRANSLATION	nonsense_mediated_decay	-	-	5	124	0	0.72	0	68.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027605	Acss2	ENSMUST00000148870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027605	Acss2	ENSMUST00000103142	ENSMUSP00000099431	TRANSLATION	protein_coding	-	-	5	714	19	14.3	7	482.6	2	-4,-6	-	-	20.673	ALTERNATIVE:1
ENSMUSG00000027605	Acss2	ENSMUST00000131054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027605	Acss2	ENSMUST00000151781	ENSMUSP00000122545	TRANSLATION	protein_coding	start/stop	-	5	293	14	6.62	0	163.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000027605	Acss2	ENSMUST00000029135	ENSMUSP00000029135	TRANSLATION	protein_coding	-	CCDS16950.1	1	701	19	14.09	7.5	484.2	2	-4,-6	-	-	20.58	PRINCIPAL:2
ENSMUSG00000027605	Acss2	ENSMUST00000065973	ENSMUSP00000068776	TRANSLATION	protein_coding	-	-	1	706	18	13.24	0	478.1	2	-4,-6	-	-	14.85	MINOR
ENSMUSG00000027605	Acss2	ENSMUST00000143169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027605	Acss2	ENSMUST00000153975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027374	Mrps5	ENSMUST00000126491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027374	Mrps5	ENSMUST00000129066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027374	Mrps5	ENSMUST00000145271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027374	Mrps5	ENSMUST00000028852	ENSMUSP00000028852	TRANSLATION	protein_coding	-	CCDS16706.1	1	432	0	9.935	5.1	137	0	-3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000027374	Mrps5	ENSMUST00000128535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027374	Mrps5	ENSMUST00000134101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027374	Mrps5	ENSMUST00000146131	ENSMUSP00000119674	TRANSLATION	protein_coding	stop	-	3	139	0	3.255	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000075273	Ttc30b	ENSMUST00000099996	ENSMUSP00000097576	TRANSLATION	protein_coding	-	CCDS38150.1	-	664	0	0.8	7.6	15	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000078919	Dpm1	ENSMUST00000109193	ENSMUSP00000104816	TRANSLATION	protein_coding	-	-	5	208	13	2.634	0	119.4	0	-4,-5	-	-	13.284	MINOR
ENSMUSG00000078919	Dpm1	ENSMUST00000136582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078919	Dpm1	ENSMUST00000156800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078919	Dpm1	ENSMUST00000153258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078919	Dpm1	ENSMUST00000140249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078919	Dpm1	ENSMUST00000141036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078919	Dpm1	ENSMUST00000150437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078919	Dpm1	ENSMUST00000154111	ENSMUSP00000118776	TRANSLATION	protein_coding	-	CCDS17109.1	1	260	17	3.234	3.9	133.6	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000078919	Dpm1	ENSMUST00000099072	ENSMUSP00000096671	TRANSLATION	nonsense_mediated_decay	start	-	5	121	12	2.31	0	92.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000078919	Dpm1	ENSMUST00000142482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027259	Adal	ENSMUST00000028702	ENSMUSP00000028702	TRANSLATION	protein_coding	-	CCDS71121.1	1	293	3	3.63	0.5	96.8	0	-4,-5	-	-	11.514	MINOR
ENSMUSG00000027259	Adal	ENSMUST00000147271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027259	Adal	ENSMUST00000119031	ENSMUSP00000113052	TRANSLATION	protein_coding	-	CCDS16633.1	5	360	5	4.68	1.5	119.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000027259	Adal	ENSMUST00000130221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027259	Adal	ENSMUST00000110662	ENSMUSP00000106290	TRANSLATION	protein_coding	-	-	5	217	3	2.47	1.5	76.6	0	-4,-5	-	-	7.98	MINOR
ENSMUSG00000027259	Adal	ENSMUST00000066155	ENSMUSP00000067133	TRANSLATION	protein_coding	-	CCDS16633.1	1	360	5	4.68	1.5	119.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000027259	Adal	ENSMUST00000110665	ENSMUSP00000106293	TRANSLATION	protein_coding	-	CCDS79836.1	1	253	3	2.47	0.5	59.2	0	-4,-5	-	-	6.936	MINOR
ENSMUSG00000027259	Adal	ENSMUST00000146750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027259	Adal	ENSMUST00000156132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027259	Adal	ENSMUST00000152164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027478	Dnmt3b	ENSMUST00000103151	ENSMUSP00000099440	TRANSLATION	protein_coding	-	CCDS16916.1	1	776	12	12.27	0.5	44.9	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000027478	Dnmt3b	ENSMUST00000109771	ENSMUSP00000105393	TRANSLATION	protein_coding	-	CCDS50759.1	1	860	12	14.27	0.5	44.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027478	Dnmt3b	ENSMUST00000140811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027478	Dnmt3b	ENSMUST00000081628	ENSMUSP00000080334	TRANSLATION	protein_coding	-	CCDS16913.1	1	839	12	14.02	0.5	44.9	0	-4,-5	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000027478	Dnmt3b	ENSMUST00000132132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027478	Dnmt3b	ENSMUST00000103150	ENSMUSP00000099439	TRANSLATION	protein_coding	-	CCDS16916.1	1	776	12	12.27	0.5	44.9	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000027478	Dnmt3b	ENSMUST00000072997	ENSMUSP00000072761	TRANSLATION	protein_coding	-	CCDS16914.1	1	859	12	14.02	0.5	44.9	0	-4,-5	-	-	17.502	PRINCIPAL:4
ENSMUSG00000027478	Dnmt3b	ENSMUST00000109773	ENSMUSP00000105395	TRANSLATION	protein_coding	-	CCDS16913.1	1	839	12	14.02	0.5	44.9	0	-4,-5	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000027478	Dnmt3b	ENSMUST00000088976	ENSMUSP00000086370	TRANSLATION	protein_coding	-	CCDS16915.1	1	796	12	12.27	0.5	44.9	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000027478	Dnmt3b	ENSMUST00000056495	ENSMUSP00000051830	TRANSLATION	protein_coding	-	CCDS50759.1	5	860	12	14.27	0.5	44.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027478	Dnmt3b	ENSMUST00000109772	ENSMUSP00000105394	TRANSLATION	protein_coding	-	CCDS16915.1	1	796	12	12.27	0.5	44.9	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000027478	Dnmt3b	ENSMUST00000109774	ENSMUSP00000105396	TRANSLATION	protein_coding	-	CCDS16914.1	1	859	12	14.02	0.5	44.9	0	-4,-5	-	-	17.502	PRINCIPAL:4
ENSMUSG00000068808	Olfr1189	ENSMUST00000090700	ENSMUSP00000088201	TRANSLATION	protein_coding	-	CCDS16341.1	-	306	0	0.36	1.5	139.8	5	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068808	Olfr1189	ENSMUST00000213679	ENSMUSP00000149696	TRANSLATION	protein_coding	-	CCDS16341.1	5	306	0	0.36	1.5	139.8	5	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039849	Pcif1	ENSMUST00000122810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039849	Pcif1	ENSMUST00000130213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039849	Pcif1	ENSMUST00000145327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039849	Pcif1	ENSMUST00000041643	ENSMUSP00000039555	TRANSLATION	protein_coding	-	CCDS17064.1	1	706	0	1	5.9	275.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000068816	Olfr152	ENSMUST00000090709	ENSMUSP00000088211	TRANSLATION	protein_coding	-	CCDS16308.1	-	316	0	0.16	6.3	165.9	4	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000068816	Olfr152	ENSMUST00000215394	ENSMUSP00000150778	TRANSLATION	protein_coding	-	-	5	314	0	0.16	6.3	165.9	4	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000068816	Olfr152	ENSMUST00000105210	ENSMUSP00000100845	TRANSLATION	protein_coding	-	-	5	314	0	0.16	6.3	165.9	4	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000050558	Prokr2	ENSMUST00000110157	ENSMUSP00000105785	TRANSLATION	protein_coding	-	-	1	198	0	1.3	0	72	6	-4,-7	-	-	4.986	MINOR
ENSMUSG00000050558	Prokr2	ENSMUST00000145995	ENSMUSP00000115564	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050558	Prokr2	ENSMUST00000049997	ENSMUSP00000056659	TRANSLATION	protein_coding	-	CCDS16773.1	1	381	0	1.79	5.3	161.5	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000050558	Prokr2	ENSMUST00000110156	ENSMUSP00000105784	TRANSLATION	protein_coding	-	CCDS16773.1	5	381	0	1.79	5.3	161.5	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000050558	Prokr2	ENSMUST00000142766	ENSMUSP00000124526	TRANSLATION	protein_coding	-	-	1	220	0	0.36	0.5	62.6	8	1,-3	-	-	1.272	MINOR
ENSMUSG00000037683	Armc3	ENSMUST00000049255	ENSMUSP00000048784	TRANSLATION	protein_coding	-	CCDS70983.1	1	869	0	6.655	5.1	97.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037683	Armc3	ENSMUST00000114640	ENSMUSP00000110287	TRANSLATION	protein_coding	-	CCDS38052.1	1	881	0	6.655	0.5	97.9	0	-4,-5	-	-	12	MINOR
ENSMUSG00000111772	Olfr228	ENSMUST00000216534	ENSMUSP00000149372	TRANSLATION	protein_coding	-	CCDS16258.1	-	313	0	0.32	3.9	181.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000111772	Olfr228	ENSMUST00000217292	ENSMUSP00000149449	TRANSLATION	protein_coding	-	CCDS16258.1	5	313	0	0.32	3.9	181.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000027442	Cst8	ENSMUST00000028931	ENSMUSP00000028931	TRANSLATION	protein_coding	-	CCDS16848.1	1	142	0	1.95	1.5	79.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027442	Cst8	ENSMUST00000109947	ENSMUSP00000105573	TRANSLATION	protein_coding	-	CCDS16848.1	3	142	0	1.95	1.5	79.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027442	Cst8	ENSMUST00000154737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050896	Rtn4rl2	ENSMUST00000054514	ENSMUSP00000057725	TRANSLATION	protein_coding	-	CCDS16197.1	1	420	0	2	1.5	99.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050896	Rtn4rl2	ENSMUST00000151799	ENSMUSP00000118362	TRANSLATION	protein_coding	start	-	1	426	0	2	0	99.7	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000050896	Rtn4rl2	ENSMUST00000151759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032841	Prr5l	ENSMUST00000144549	ENSMUSP00000116266	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032841	Prr5l	ENSMUST00000127358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032841	Prr5l	ENSMUST00000154525	ENSMUSP00000120192	TRANSLATION	protein_coding	stop	-	5	95	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032841	Prr5l	ENSMUST00000125985	ENSMUSP00000122996	TRANSLATION	protein_coding	stop	-	3	127	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032841	Prr5l	ENSMUST00000171088	ENSMUSP00000130152	TRANSLATION	protein_coding	-	CCDS38186.1	5	370	0	0	5.1	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000032841	Prr5l	ENSMUST00000124802	ENSMUSP00000118502	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032841	Prr5l	ENSMUST00000141814	ENSMUSP00000118537	TRANSLATION	protein_coding	start/stop	-	3	238	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032841	Prr5l	ENSMUST00000043845	ENSMUSP00000042167	TRANSLATION	protein_coding	-	CCDS38186.1	1	370	0	0	5.1	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000032841	Prr5l	ENSMUST00000140387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032841	Prr5l	ENSMUST00000163762	ENSMUSP00000127530	TRANSLATION	protein_coding	-	CCDS38186.1	5	370	0	0	5.1	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000075195	Olfr1048	ENSMUST00000099900	ENSMUSP00000097484	TRANSLATION	protein_coding	-	CCDS16247.1	-	320	0	0.2	0.5	167.6	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000075195	Olfr1048	ENSMUST00000215607	ENSMUSP00000150508	TRANSLATION	protein_coding	-	-	3	313	0	0.2	0	167.6	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000002100	Mybpc3	ENSMUST00000111430	ENSMUSP00000107058	TRANSLATION	protein_coding	-	-	5	1277	0	24.924	0.5	485.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000002100	Mybpc3	ENSMUST00000137942	ENSMUSP00000119994	TRANSLATION	protein_coding	-	-	5	1113	0	22.824	0	441.3	0	-4,-6	-	-	5.124	MINOR
ENSMUSG00000002100	Mybpc3	ENSMUST00000169776	ENSMUSP00000127070	TRANSLATION	protein_coding	-	CCDS50631.1	5	1278	0	24.924	0.5	485.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000045150	Olfr1161	ENSMUST00000054845	ENSMUSP00000060977	TRANSLATION	protein_coding	-	CCDS16321.1	-	321	0	0.2	0.5	174.7	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045150	Olfr1161	ENSMUST00000217006	ENSMUSP00000150220	TRANSLATION	protein_coding	-	CCDS16321.1	5	321	0	0.2	0.5	174.7	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045150	Olfr1161	ENSMUST00000214438	ENSMUSP00000150251	TRANSLATION	protein_coding	-	CCDS16321.1	5	321	0	0.2	0.5	174.7	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035513	Ntng2	ENSMUST00000102873	ENSMUSP00000099937	TRANSLATION	protein_coding	-	CCDS15851.1	1	530	6	5.37	1.5	257.9	0	4,-1	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000035513	Ntng2	ENSMUST00000071201	ENSMUSP00000071190	TRANSLATION	protein_coding	-	-	5	430	6	3	0	199.6	0	4,-1	-	-	8.964	MINOR
ENSMUSG00000035513	Ntng2	ENSMUST00000183583	ENSMUSP00000139034	TRANSLATION	nonsense_mediated_decay	-	-	5	368	6	3.132	0	199.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000035513	Ntng2	ENSMUST00000177689	ENSMUSP00000136659	TRANSLATION	protein_coding	-	-	5	530	6	5.238	0.5	257.9	0	4,-1	-	-	16.938	ALTERNATIVE:2
ENSMUSG00000035513	Ntng2	ENSMUST00000149096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035513	Ntng2	ENSMUST00000143194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035513	Ntng2	ENSMUST00000147897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035513	Ntng2	ENSMUST00000091153	ENSMUSP00000088688	TRANSLATION	protein_coding	-	CCDS84499.1	1	564	6	5.53	1.5	257.9	0	4,-1	-	-	17.52	ALTERNATIVE:2
ENSMUSG00000035513	Ntng2	ENSMUST00000048455	ENSMUSP00000035468	TRANSLATION	protein_coding	-	CCDS15852.1	1	589	6	5.77	0.5	257.9	0	4,-1	-	-	18	PRINCIPAL:4
ENSMUSG00000035513	Ntng2	ENSMUST00000125765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035513	Ntng2	ENSMUST00000147274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000112509	ENSMUSP00000108128	TRANSLATION	protein_coding	-	-	1	386	0	5.7	0	110.5	0	-4,-7	-	-	12	MINOR
ENSMUSG00000026970	Rbms1	ENSMUST00000153555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000125485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000164147	ENSMUSP00000131306	TRANSLATION	protein_coding	-	CCDS50590.1	1	417	0	5.7	7.5	110.5	0	-4,-2	-	-	14.064	MINOR
ENSMUSG00000026970	Rbms1	ENSMUST00000123046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000132529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000151846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000128866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026970	Rbms1	ENSMUST00000028347	ENSMUSP00000028347	TRANSLATION	protein_coding	-	CCDS50591.1	1	403	0	5.4	13.6	110.5	0	-4,-6	-	-	15.4	PRINCIPAL:1
ENSMUSG00000038751	Ptk6	ENSMUST00000016511	ENSMUSP00000016511	TRANSLATION	protein_coding	-	CCDS17203.1	1	451	19	7.44	2.7	402	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026858	Miga2	ENSMUST00000175864	ENSMUSP00000135812	TRANSLATION	protein_coding	start/stop	-	3	128	0	0	0	151.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026858	Miga2	ENSMUST00000127410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026858	Miga2	ENSMUST00000176517	ENSMUSP00000135644	TRANSLATION	protein_coding	start	-	3	111	0	0	0	89.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026858	Miga2	ENSMUST00000100214	ENSMUSP00000097787	TRANSLATION	protein_coding	-	CCDS15880.1	1	593	0	0	6.3	747.8	1	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000026858	Miga2	ENSMUST00000146308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026858	Miga2	ENSMUST00000142801	ENSMUSP00000118253	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	81.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026858	Miga2	ENSMUST00000137441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026858	Miga2	ENSMUST00000116543	ENSMUSP00000135126	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	48.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026858	Miga2	ENSMUST00000135841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026858	Miga2	ENSMUST00000077977	ENSMUSP00000077127	TRANSLATION	protein_coding	-	CCDS15880.1	1	593	0	0	6.3	747.8	1	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000026858	Miga2	ENSMUST00000140075	ENSMUSP00000135519	TRANSLATION	protein_coding	-	-	1	443	0	0	0	364	1	-4,-5	-	-	0	MINOR
ENSMUSG00000026858	Miga2	ENSMUST00000125610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039108	Lsm14b	ENSMUST00000058764	ENSMUSP00000062519	TRANSLATION	protein_coding	-	-	1	305	0	0	1.2	90.9	0	-4,-6	-	-	0.076	MINOR
ENSMUSG00000039108	Lsm14b	ENSMUST00000140257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039108	Lsm14b	ENSMUST00000055485	ENSMUSP00000055036	TRANSLATION	protein_coding	-	CCDS17165.2	1	385	0	2	6.3	197.2	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038844	Kif16b	ENSMUST00000212106	ENSMUSP00000148706	TRANSLATION	protein_coding	start	-	5	719	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038844	Kif16b	ENSMUST00000230763	ENSMUSP00000154926	TRANSLATION	protein_coding	-	-	-	1323	11	12.28	1.5	453.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000038844	Kif16b	ENSMUST00000142078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038844	Kif16b	ENSMUST00000211861	ENSMUSP00000148731	TRANSLATION	protein_coding	-	-	5	1386	11	8.53	0	400.7	0	-4,-2	-	-	8.856	MINOR
ENSMUSG00000038844	Kif16b	ENSMUST00000043589	ENSMUSP00000042551	TRANSLATION	protein_coding	-	CCDS38251.1	2	1312	11	12.28	1.5	453.1	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000027409	1700020A23Rik	ENSMUST00000189961	ENSMUSP00000140511	TRANSLATION	protein_coding	-	CCDS50710.1	5	131	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027409	1700020A23Rik	ENSMUST00000110281	ENSMUSP00000105910	TRANSLATION	protein_coding	-	CCDS50710.1	3	131	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027409	1700020A23Rik	ENSMUST00000028898	ENSMUSP00000028898	TRANSLATION	protein_coding	-	CCDS50710.1	1	131	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000075189	Olfr1055	ENSMUST00000213564	ENSMUSP00000149219	TRANSLATION	protein_coding	-	CCDS84544.1	5	346	0	0.36	0.5	163.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075189	Olfr1055	ENSMUST00000099894	ENSMUSP00000097479	TRANSLATION	protein_coding	-	CCDS84544.1	5	346	0	0.36	0.5	163.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075189	Olfr1055	ENSMUST00000188023	ENSMUSP00000140847	TRANSLATION	protein_coding	stop	-	-	313	0	0.36	5.1	163.7	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000101078	Olfr1166	ENSMUST00000217575	ENSMUSP00000149099	TRANSLATION	protein_coding	-	CCDS16326.1	5	316	0	0.2	2.7	171.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101078	Olfr1166	ENSMUST00000099833	ENSMUSP00000097421	TRANSLATION	protein_coding	-	CCDS16326.1	-	316	0	0.2	2.7	171.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079006	Gm14151	ENSMUST00000109890	ENSMUSP00000105516	TRANSLATION	protein_coding	-	CCDS50745.1	5	640	18	0.6	0.5	229.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079006	Gm14151	ENSMUST00000139910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051149	Adnp	ENSMUST00000131200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051149	Adnp	ENSMUST00000088001	ENSMUSP00000085316	TRANSLATION	protein_coding	-	CCDS38342.1	1	1108	12	0	0.5	28.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051149	Adnp	ENSMUST00000139984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051149	Adnp	ENSMUST00000057793	ENSMUSP00000056809	TRANSLATION	protein_coding	-	CCDS38342.1	5	1108	12	0	0.5	28.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002107	Celf2	ENSMUST00000183984	ENSMUSP00000138974	TRANSLATION	nonsense_mediated_decay	start	-	5	443	0	6.024	0	110.9	0	-2,2	-	-	-1	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000148321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002107	Celf2	ENSMUST00000123142	ENSMUSP00000138666	TRANSLATION	protein_coding	stop	-	5	92	0	2.25	0	54.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000183209	ENSMUSP00000138355	TRANSLATION	protein_coding	-	CCDS59632.1	1	472	0	7.984	0.5	135.5	0	-4,-5	-	-	7.614	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000182037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002107	Celf2	ENSMUST00000182879	ENSMUSP00000138359	TRANSLATION	protein_coding	-	CCDS79729.1	1	440	0	7.4	1.5	135.5	0	-4,-5	-	-	6.69	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000114934	ENSMUSP00000110584	TRANSLATION	protein_coding	-	CCDS50494.1	1	526	0	8.664	5.5	175.3	0	-4,-5	-	-	13.572	PRINCIPAL:4
ENSMUSG00000002107	Celf2	ENSMUST00000183091	ENSMUSP00000138795	TRANSLATION	protein_coding	-	-	5	460	0	7.664	0	135.5	0	-4,-5	-	-	6.972	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000142941	ENSMUSP00000120459	TRANSLATION	protein_coding	-	CCDS50492.1	5	490	0	8.4	5.1	175.3	0	-4,-5	-	-	12.846	ALTERNATIVE:1
ENSMUSG00000002107	Celf2	ENSMUST00000183269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002107	Celf2	ENSMUST00000137733	ENSMUSP00000138694	TRANSLATION	protein_coding	stop	-	3	134	0	3.91	0	54.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000002176	ENSMUSP00000002176	TRANSLATION	protein_coding	-	CCDS50491.1	1	484	0	8.4	5.1	175.3	0	-4,-5	-	-	12.846	ALTERNATIVE:1
ENSMUSG00000002107	Celf2	ENSMUST00000182560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002107	Celf2	ENSMUST00000138347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002107	Celf2	ENSMUST00000182355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002107	Celf2	ENSMUST00000182851	ENSMUSP00000138363	TRANSLATION	protein_coding	-	-	1	508	0	8.664	3.6	175.3	0	-4,-5	-	-	12.636	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000100429	ENSMUSP00000097996	TRANSLATION	protein_coding	-	CCDS50491.1	5	484	0	8.4	5.1	175.3	0	-4,-5	-	-	12.846	ALTERNATIVE:1
ENSMUSG00000002107	Celf2	ENSMUST00000182404	ENSMUSP00000138769	TRANSLATION	protein_coding	stop	-	5	276	0	3.51	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000114927	ENSMUSP00000110577	TRANSLATION	protein_coding	-	CCDS84468.1	5	488	0	8.4	7.1	175.3	0	-4,-5	-	-	13.83	ALTERNATIVE:1
ENSMUSG00000002107	Celf2	ENSMUST00000170438	ENSMUSP00000130829	TRANSLATION	protein_coding	-	CCDS50493.1	5	478	0	7.664	0.5	135.5	0	-4,-5	-	-	6.972	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000126742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002107	Celf2	ENSMUST00000114924	ENSMUSP00000110574	TRANSLATION	protein_coding	-	CCDS50494.1	1	526	0	8.664	5.5	175.3	0	-4,-5	-	-	13.572	PRINCIPAL:4
ENSMUSG00000002107	Celf2	ENSMUST00000182657	ENSMUSP00000138785	TRANSLATION	protein_coding	stop	-	1	46	0	1	0	23	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000182523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002107	Celf2	ENSMUST00000114923	ENSMUSP00000110573	TRANSLATION	protein_coding	-	-	3	159	0	2.584	0	51.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000002107	Celf2	ENSMUST00000150624	ENSMUSP00000138297	TRANSLATION	protein_coding	-	CCDS84468.1	1	488	0	8.4	7.1	175.3	0	-4,-5	-	-	13.83	ALTERNATIVE:1
ENSMUSG00000002107	Celf2	ENSMUST00000182749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002107	Celf2	ENSMUST00000182706	ENSMUSP00000138764	TRANSLATION	protein_coding	-	CCDS59633.1	1	520	0	8.984	4.9	175.3	0	-4,-5	-	-	13.917	ALTERNATIVE:1
ENSMUSG00000026832	Cytip	ENSMUST00000131443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000144117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000146545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000028175	ENSMUSP00000028175	TRANSLATION	protein_coding	-	CCDS16048.1	1	359	0	3.45	3.9	47.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026832	Cytip	ENSMUST00000151785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000148764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000153052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026832	Cytip	ENSMUST00000151169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027185	Nat10	ENSMUST00000143017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000133016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000090447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000127581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000151010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000028608	ENSMUSP00000028608	TRANSLATION	protein_coding	-	CCDS16480.1	1	1024	19	22.104	0.5	926.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027185	Nat10	ENSMUST00000132135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000140895	ENSMUSP00000115072	TRANSLATION	protein_coding	stop	-	3	186	0	4.614	0	101.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027185	Nat10	ENSMUST00000148798	ENSMUSP00000129637	TRANSLATION	protein_coding	stop	-	3	44	0	1.198	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027185	Nat10	ENSMUST00000137050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000165970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000145189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000137600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027185	Nat10	ENSMUST00000144590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017667	Zfp334	ENSMUST00000103084	ENSMUSP00000099373	TRANSLATION	protein_coding	-	CCDS17079.1	1	679	56	1.4	0.5	332.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027573	Gid8	ENSMUST00000150067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027573	Gid8	ENSMUST00000078687	ENSMUSP00000077753	TRANSLATION	protein_coding	-	CCDS17185.1	1	228	0	0	21.5	158.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000027573	Gid8	ENSMUST00000029090	ENSMUSP00000029090	TRANSLATION	protein_coding	-	CCDS17185.1	1	228	0	0	21.5	158.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000038628	Polr3k	ENSMUST00000039551	ENSMUSP00000044582	TRANSLATION	protein_coding	-	CCDS17225.1	1	108	4	2.5	16.3	107.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000038628	Polr3k	ENSMUST00000153214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078867	Gm14418	ENSMUST00000149689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078867	Gm14418	ENSMUST00000128657	ENSMUSP00000116617	TRANSLATION	protein_coding	-	-	5	358	38	2.25	0.5	252.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078867	Gm14418	ENSMUST00000108955	ENSMUSP00000104583	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	78.1	0	-4,-5	-	-	3.864	MINOR
ENSMUSG00000078876	Gm14408	ENSMUST00000122218	ENSMUSP00000113743	TRANSLATION	protein_coding	stop	-	5	136	7	3.2	0.5	90.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078876	Gm14408	ENSMUST00000126726	ENSMUSP00000119426	TRANSLATION	protein_coding	-	-	5	92	0	1	0	70.5	0	-4,-5	-	-	6.258	PRINCIPAL:1
ENSMUSG00000075284	Wipf1	ENSMUST00000141264	ENSMUSP00000119190	TRANSLATION	protein_coding	stop	-	2	196	0	1	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075284	Wipf1	ENSMUST00000143061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075284	Wipf1	ENSMUST00000094681	ENSMUSP00000092268	TRANSLATION	protein_coding	-	CCDS16131.1	1	493	0	2.1	0.5	45.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075284	Wipf1	ENSMUST00000151939	ENSMUSP00000121335	TRANSLATION	protein_coding	stop	-	3	58	0	1	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075284	Wipf1	ENSMUST00000102680	ENSMUSP00000099741	TRANSLATION	protein_coding	-	CCDS16131.1	1	493	0	2.1	0.5	45.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075284	Wipf1	ENSMUST00000129594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075284	Wipf1	ENSMUST00000102679	ENSMUSP00000099740	TRANSLATION	protein_coding	-	CCDS16131.1	1	493	0	2.1	0.5	45.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075217	Fads2b	ENSMUST00000099923	ENSMUSP00000097507	TRANSLATION	protein_coding	-	CCDS38168.1	1	487	19	1.2	1.5	200.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039515	Ptpa	ENSMUST00000113601	ENSMUSP00000109231	TRANSLATION	protein_coding	-	-	5	104	4	3.08	0	88.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039515	Ptpa	ENSMUST00000125743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039515	Ptpa	ENSMUST00000136009	ENSMUSP00000114985	TRANSLATION	protein_coding	-	-	3	61	4	1.75	0	89.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000039515	Ptpa	ENSMUST00000128516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039515	Ptpa	ENSMUST00000113603	ENSMUSP00000109233	TRANSLATION	protein_coding	-	-	5	281	13	7.83	1.2	312.3	0	-4,-5	-	-	10.092	MINOR
ENSMUSG00000039515	Ptpa	ENSMUST00000125561	ENSMUSP00000114290	TRANSLATION	nonsense_mediated_decay	start	-	3	126	4	3.18	0	184.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039515	Ptpa	ENSMUST00000042055	ENSMUSP00000046837	TRANSLATION	protein_coding	-	CCDS15883.1	1	323	13	8.83	7.6	418.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039515	Ptpa	ENSMUST00000159932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039515	Ptpa	ENSMUST00000137741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039515	Ptpa	ENSMUST00000130741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039515	Ptpa	ENSMUST00000152165	ENSMUSP00000117121	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039515	Ptpa	ENSMUST00000135105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039515	Ptpa	ENSMUST00000131476	ENSMUSP00000116268	TRANSLATION	protein_coding	-	-	2	61	4	1.75	0	89.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000063235	Ptpmt1	ENSMUST00000155621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063235	Ptpmt1	ENSMUST00000111461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063235	Ptpmt1	ENSMUST00000077874	ENSMUSP00000159164	TRANSLATION	protein_coding	-	-	5	260	10	3.75	0.5	65.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000063235	Ptpmt1	ENSMUST00000125001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063235	Ptpmt1	ENSMUST00000150556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079247	Gm13691	ENSMUST00000099947	ENSMUSP00000097530	TRANSLATION	protein_coding	-	-	-	830	0	1	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046470	Sox18	ENSMUST00000054491	ENSMUSP00000062759	TRANSLATION	protein_coding	-	CCDS17218.1	1	377	0	1.2	1.5	140.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009563	Tor2a	ENSMUST00000149987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009563	Tor2a	ENSMUST00000175763	ENSMUSP00000135701	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	1.2	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000009563	Tor2a	ENSMUST00000009707	ENSMUSP00000009707	TRANSLATION	protein_coding	-	CCDS15929.1	1	321	11	6.98	6.3	174.8	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000009563	Tor2a	ENSMUST00000123624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009563	Tor2a	ENSMUST00000156617	ENSMUSP00000122251	TRANSLATION	nonsense_mediated_decay	-	-	2	73	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000009563	Tor2a	ENSMUST00000177382	ENSMUSP00000134968	TRANSLATION	protein_coding	-	-	5	101	3	1.1	0	80.4	0	3,-2	-	-	1.002	MINOR
ENSMUSG00000009563	Tor2a	ENSMUST00000149720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009563	Tor2a	ENSMUST00000140999	ENSMUSP00000135278	TRANSLATION	protein_coding	start/stop	-	5	268	11	5.58	0	118.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000075175	Olfr1086	ENSMUST00000099878	ENSMUSP00000097463	TRANSLATION	protein_coding	-	CCDS16264.1	-	310	0	0.24	2.7	163.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075175	Olfr1086	ENSMUST00000213198	ENSMUSP00000150094	TRANSLATION	protein_coding	-	CCDS16264.1	5	310	0	0.24	2.7	163.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090353	Gm17555	ENSMUST00000164042	ENSMUSP00000127976	TRANSLATION	protein_coding	stop	-	-	371	9	0.8	0	43.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000095809	Olfr1290	ENSMUST00000208695	ENSMUSP00000146457	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	43.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000095809	Olfr1290	ENSMUST00000208881	ENSMUSP00000146756	TRANSLATION	protein_coding	stop	-	3	108	0	0.4	0	67	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000095809	Olfr1290	ENSMUST00000217611	ENSMUSP00000150388	TRANSLATION	protein_coding	-	CCDS50659.1	3	312	0	1	3.9	176	8	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000095809	Olfr1290	ENSMUST00000099616	ENSMUSP00000097211	TRANSLATION	protein_coding	-	CCDS50659.1	-	312	0	1	3.9	176	8	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000026943	Lcn12	ENSMUST00000114245	ENSMUSP00000109883	TRANSLATION	protein_coding	-	-	1	157	0	4.08	0	76.7	0	-4,-6	-	-	10.398	MINOR
ENSMUSG00000026943	Lcn12	ENSMUST00000028312	ENSMUSP00000028312	TRANSLATION	protein_coding	-	CCDS15776.1	1	193	0	4.88	0.5	76.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039021	Ttc16	ENSMUST00000125891	ENSMUSP00000125210	TRANSLATION	nonsense_mediated_decay	-	-	2	119	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039021	Ttc16	ENSMUST00000161430	ENSMUSP00000124031	TRANSLATION	protein_coding	-	CCDS15930.2	1	824	0	3.27	0.5	14.1	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000039021	Ttc16	ENSMUST00000161950	ENSMUSP00000123927	TRANSLATION	protein_coding	-	CCDS71030.1	1	767	0	3.27	0.5	14.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039021	Ttc16	ENSMUST00000161958	ENSMUSP00000124054	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039021	Ttc16	ENSMUST00000091059	ENSMUSP00000088585	TRANSLATION	protein_coding	-	CCDS79777.1	1	709	0	3.27	0.5	14.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000039021	Ttc16	ENSMUST00000161089	ENSMUSP00000124915	TRANSLATION	protein_coding	-	CCDS71030.1	1	767	0	3.27	0.5	14.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039021	Ttc16	ENSMUST00000123674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039021	Ttc16	ENSMUST00000066478	ENSMUSP00000068977	TRANSLATION	protein_coding	-	CCDS71030.1	1	767	0	3.27	0.5	14.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000095199	Zfp967	ENSMUST00000238250	ENSMUSP00000158730	TRANSLATION	protein_coding	-	-	-	90	0	1.45	0	73.1	0	-4,-6	-	-	4.242	MINOR
ENSMUSG00000095199	Zfp967	ENSMUST00000178443	ENSMUSP00000136521	TRANSLATION	protein_coding	-	CCDS57198.1	2	485	53	2.05	0.5	316.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000095199	Zfp967	ENSMUST00000238420	ENSMUSP00000158700	TRANSLATION	protein_coding	-	-	-	88	0	1.45	0	73.1	0	-4,-6	-	-	4.242	MINOR
ENSMUSG00000095199	Zfp967	ENSMUST00000238585	ENSMUSP00000158586	TRANSLATION	protein_coding	-	-	-	89	0	1.45	0	73.1	0	-4,-6	-	-	4.242	MINOR
ENSMUSG00000095199	Zfp967	ENSMUST00000238365	ENSMUSP00000158800	TRANSLATION	protein_coding	-	-	-	83	0	1.45	0	73.1	0	-4,-6	-	-	4.242	MINOR
ENSMUSG00000095199	Zfp967	ENSMUST00000238206	ENSMUSP00000158763	TRANSLATION	protein_coding	stop	-	-	95	0	1.45	0	73.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095199	Zfp967	ENSMUST00000108997	ENSMUSP00000104625	TRANSLATION	protein_coding	-	CCDS57199.1	3	138	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000006494	Pdk1	ENSMUST00000134362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000148249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000156036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000151358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000129887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000152696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000129427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006494	Pdk1	ENSMUST00000006669	ENSMUSP00000006669	TRANSLATION	protein_coding	-	CCDS16119.1	1	434	26	10.25	1.5	229.3	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000033902	Mapkbp1	ENSMUST00000137760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033902	Mapkbp1	ENSMUST00000229024	ENSMUSP00000155163	TRANSLATION	protein_coding	-	-	-	1509	0	9.027	1.5	87.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000033902	Mapkbp1	ENSMUST00000148161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033902	Mapkbp1	ENSMUST00000066058	ENSMUSP00000068516	TRANSLATION	protein_coding	-	CCDS16612.1	1	1503	0	8.895	1.5	87.7	0	-4,-7	-	-	11.736	PRINCIPAL:2
ENSMUSG00000033902	Mapkbp1	ENSMUST00000128077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051319	Mtln	ENSMUST00000135091	ENSMUSP00000141107	TRANSLATION	protein_coding	-	-	1	56	0	0	0	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000057110	Cntrl	ENSMUST00000150807	ENSMUSP00000142683	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000201787	ENSMUSP00000143914	TRANSLATION	protein_coding	start	-	3	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000130457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057110	Cntrl	ENSMUST00000113033	ENSMUSP00000108656	TRANSLATION	protein_coding	-	-	5	481	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000028235	ENSMUSP00000028235	TRANSLATION	protein_coding	-	-	1	559	0	3.7	0	64.3	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000057110	Cntrl	ENSMUST00000143807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057110	Cntrl	ENSMUST00000113034	ENSMUSP00000108657	TRANSLATION	protein_coding	stop	-	1	987	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000124081	ENSMUSP00000143087	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000156933	ENSMUSP00000118731	TRANSLATION	protein_coding	-	-	5	2334	0	3.7	0.5	64.3	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000057110	Cntrl	ENSMUST00000113037	ENSMUSP00000108660	TRANSLATION	protein_coding	-	-	5	1780	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057110	Cntrl	ENSMUST00000028237	ENSMUSP00000028237	TRANSLATION	protein_coding	-	-	5	2334	0	3.7	0.5	64.3	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000057110	Cntrl	ENSMUST00000113032	ENSMUSP00000108655	TRANSLATION	protein_coding	-	CCDS57170.2	1	2333	0	3.7	0.5	64.3	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000057110	Cntrl	ENSMUST00000123884	ENSMUSP00000119760	TRANSLATION	protein_coding	start	-	1	635	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074754	Smim26	ENSMUST00000136628	ENSMUSP00000132193	TRANSLATION	protein_coding	-	CCDS16823.1	1	107	0	0	1.5	0	0	-2,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000059251	Olfr345	ENSMUST00000076850	ENSMUSP00000076122	TRANSLATION	protein_coding	-	CCDS15977.1	-	311	0	0.42	1.5	191.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075221	Olfr992	ENSMUST00000215617	ENSMUSP00000149132	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000075221	Olfr992	ENSMUST00000099927	ENSMUSP00000097511	TRANSLATION	protein_coding	-	CCDS16205.1	-	309	0	0.6	5.1	172.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075221	Olfr992	ENSMUST00000213749	ENSMUSP00000150680	TRANSLATION	protein_coding	-	CCDS16205.1	5	309	0	0.6	5.1	172.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000075221	Olfr992	ENSMUST00000214895	ENSMUSP00000149333	TRANSLATION	protein_coding	-	CCDS16205.1	3	309	0	0.6	5.1	172.8	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000059379	Olfr1014	ENSMUST00000213453	ENSMUSP00000150352	TRANSLATION	protein_coding	-	CCDS16219.1	3	305	0	0.28	6.4	169.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059379	Olfr1014	ENSMUST00000076250	ENSMUSP00000075600	TRANSLATION	protein_coding	-	CCDS16219.1	-	305	0	0.28	6.4	169.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000093804	Olfr1303	ENSMUST00000216114	ENSMUSP00000149015	TRANSLATION	protein_coding	-	CCDS16534.1	5	312	0	0.36	6.4	145.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000093804	Olfr1303	ENSMUST00000099609	ENSMUSP00000097204	TRANSLATION	protein_coding	-	CCDS16534.1	-	312	0	0.36	6.4	145.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038963	Slco4a1	ENSMUST00000038225	ENSMUSP00000045023	TRANSLATION	protein_coding	-	CCDS17176.1	1	723	0	0	0.5	622.3	12	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038963	Slco4a1	ENSMUST00000138446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038963	Slco4a1	ENSMUST00000128367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038963	Slco4a1	ENSMUST00000038259	ENSMUSP00000046502	TRANSLATION	protein_coding	-	CCDS17176.1	1	723	0	0	0.5	622.3	12	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038963	Slco4a1	ENSMUST00000139902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027509	Rae1	ENSMUST00000123039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027509	Rae1	ENSMUST00000138237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027509	Rae1	ENSMUST00000124793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027509	Rae1	ENSMUST00000029013	ENSMUSP00000029013	TRANSLATION	protein_coding	-	CCDS17138.1	1	368	0	9.83	19.5	38.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000027509	Rae1	ENSMUST00000132212	ENSMUSP00000121815	TRANSLATION	protein_coding	stop	-	2	203	0	6	0	38.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000109322	Olfr1283	ENSMUST00000090328	ENSMUSP00000087800	TRANSLATION	protein_coding	-	CCDS16523.1	-	305	0	0.3	5.1	169.3	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000109322	Olfr1283	ENSMUST00000204064	ENSMUSP00000145495	TRANSLATION	protein_coding	-	CCDS16523.1	5	305	0	0.3	5.1	169.3	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000109322	Olfr1283	ENSMUST00000216637	ENSMUSP00000150510	TRANSLATION	protein_coding	-	CCDS16523.1	5	305	0	0.3	5.1	169.3	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027544	Nfatc2	ENSMUST00000151292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027544	Nfatc2	ENSMUST00000137451	ENSMUSP00000118329	TRANSLATION	protein_coding	-	CCDS71201.1	1	653	0	4	1.5	79.5	0	-4,-2	-	-	3.798	MINOR
ENSMUSG00000027544	Nfatc2	ENSMUST00000171689	ENSMUSP00000130875	TRANSLATION	protein_coding	-	CCDS17114.1	1	452	0	4	0.5	79.5	0	-4,-2	-	-	3.798	MINOR
ENSMUSG00000027544	Nfatc2	ENSMUST00000029057	ENSMUSP00000029057	TRANSLATION	protein_coding	-	CCDS17113.1	1	673	0	4	1.5	79.5	0	-4,-5	-	-	3.798	MINOR
ENSMUSG00000027544	Nfatc2	ENSMUST00000099067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027544	Nfatc2	ENSMUST00000138546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027544	Nfatc2	ENSMUST00000140137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027544	Nfatc2	ENSMUST00000109184	ENSMUSP00000104812	TRANSLATION	protein_coding	-	CCDS50803.1	1	923	0	5.5	1.5	166.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027544	Nfatc2	ENSMUST00000074618	ENSMUSP00000074198	TRANSLATION	protein_coding	-	CCDS17112.1	1	927	0	5.5	1.5	166.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027180	Fbxo3	ENSMUST00000143799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027180	Fbxo3	ENSMUST00000111135	ENSMUSP00000106765	TRANSLATION	protein_coding	-	-	5	410	0	3.33	0	98.8	0	-4,-5	-	-	10.038	MINOR
ENSMUSG00000027180	Fbxo3	ENSMUST00000102565	ENSMUSP00000099625	TRANSLATION	protein_coding	-	CCDS16485.1	1	415	0	3.33	3.9	131.5	0	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000027180	Fbxo3	ENSMUST00000028603	ENSMUSP00000028603	TRANSLATION	protein_coding	-	CCDS16484.1	1	480	0	3.33	1.5	131.5	0	-4,-6	-	-	12.172	PRINCIPAL:4
ENSMUSG00000027180	Fbxo3	ENSMUST00000111136	ENSMUSP00000106766	TRANSLATION	protein_coding	-	-	1	361	0	2.33	0	95.2	0	-4,-6	-	-	7.824	MINOR
ENSMUSG00000005087	Cd44	ENSMUST00000124624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005087	Cd44	ENSMUST00000005218	ENSMUSP00000005218	TRANSLATION	protein_coding	-	CCDS16472.1	1	780	0	3.7	0.5	69.6	0	4,-1	-	-	12	PRINCIPAL:4
ENSMUSG00000005087	Cd44	ENSMUST00000111198	ENSMUSP00000106829	TRANSLATION	protein_coding	-	CCDS50650.1	1	657	0	3.7	0.5	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000111194	ENSMUSP00000106825	TRANSLATION	protein_coding	-	-	5	577	0	3.7	0	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000111190	ENSMUSP00000106821	TRANSLATION	protein_coding	-	CCDS50648.1	1	464	0	3.7	0.5	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000099673	ENSMUSP00000097265	TRANSLATION	protein_coding	-	CCDS16471.1	1	365	0	3.7	0.5	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000111192	ENSMUSP00000106823	TRANSLATION	protein_coding	-	-	5	434	0	3.7	0	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000111191	ENSMUSP00000106822	TRANSLATION	protein_coding	-	CCDS50649.1	1	498	0	3.7	0.5	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005087	Cd44	ENSMUST00000060516	ENSMUSP00000062330	TRANSLATION	protein_coding	-	CCDS16470.1	1	580	0	3.7	0.5	69.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027380	Acoxl	ENSMUST00000126410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027380	Acoxl	ENSMUST00000110344	ENSMUSP00000105973	TRANSLATION	protein_coding	-	-	1	352	20	5.95	0.5	100.7	0	-4,-7	-	-	1.242	MINOR
ENSMUSG00000027380	Acoxl	ENSMUST00000028859	ENSMUSP00000028859	TRANSLATION	protein_coding	-	CCDS16711.1	1	632	31	11	1.5	180	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027243	Harbi1	ENSMUST00000111322	ENSMUSP00000106954	TRANSLATION	protein_coding	-	-	1	244	0	0	0.5	56.8	0	-4,-7	-	-	2.052	MINOR
ENSMUSG00000027243	Harbi1	ENSMUST00000090608	ENSMUSP00000088098	TRANSLATION	protein_coding	-	CCDS50642.1	1	349	0	0	12.8	122.6	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000027243	Harbi1	ENSMUST00000128140	ENSMUSP00000117640	TRANSLATION	protein_coding	stop	-	2	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027243	Harbi1	ENSMUST00000142692	ENSMUSP00000121420	TRANSLATION	protein_coding	-	-	1	246	0	0	0	56.8	0	-4,-7	-	-	2.052	MINOR
ENSMUSG00000027243	Harbi1	ENSMUST00000140183	ENSMUSP00000116256	TRANSLATION	protein_coding	stop	-	2	176	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096554	Olfr1282	ENSMUST00000099618	ENSMUSP00000097213	TRANSLATION	protein_coding	-	CCDS16522.1	-	305	0	0.16	3.9	158.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026778	Prkcq	ENSMUST00000028118	ENSMUSP00000028118	TRANSLATION	protein_coding	-	CCDS15682.1	1	707	27	12.78	6.3	359.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026778	Prkcq	ENSMUST00000192461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026778	Prkcq	ENSMUST00000102970	ENSMUSP00000100035	TRANSLATION	protein_coding	stop	-	5	643	27	11.38	1.2	297.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026778	Prkcq	ENSMUST00000114853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026778	Prkcq	ENSMUST00000195628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026778	Prkcq	ENSMUST00000195207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053896	4933409G03Rik	ENSMUST00000137117	ENSMUSP00000117165	TRANSLATION	protein_coding	start/stop	-	5	196	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053896	4933409G03Rik	ENSMUST00000102713	ENSMUSP00000099774	TRANSLATION	protein_coding	-	CCDS16085.1	1	320	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037197	Rbm17	ENSMUST00000040314	ENSMUSP00000041831	TRANSLATION	protein_coding	-	CCDS15684.1	1	405	0	3.5	10.8	69.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037197	Rbm17	ENSMUST00000156469	ENSMUSP00000117133	TRANSLATION	protein_coding	stop	-	3	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037197	Rbm17	ENSMUST00000150369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037197	Rbm17	ENSMUST00000195047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037197	Rbm17	ENSMUST00000125808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037197	Rbm17	ENSMUST00000131036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026773	Pfkfb3	ENSMUST00000191726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026773	Pfkfb3	ENSMUST00000145970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026773	Pfkfb3	ENSMUST00000028114	ENSMUSP00000028114	TRANSLATION	protein_coding	-	CCDS50499.1	1	526	19	12.066	3.9	357.8	0	-4,-7	-	-	18.321	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000114844	ENSMUSP00000110493	TRANSLATION	protein_coding	-	-	5	542	19	12.066	1.5	357.8	0	-4,-7	-	-	17.334	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000191668	ENSMUSP00000142079	TRANSLATION	protein_coding	-	CCDS50501.1	1	555	19	12.066	1.5	357.8	0	-4,-7	-	-	17.334	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000114845	ENSMUSP00000110494	TRANSLATION	protein_coding	-	CCDS50499.1	5	526	19	12.066	3.9	357.8	0	-4,-7	-	-	18.321	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000144921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026773	Pfkfb3	ENSMUST00000183869	ENSMUSP00000138893	TRANSLATION	protein_coding	-	CCDS50498.1	1	462	19	11.5	5.3	357.8	0	-4,-7	-	-	17.769	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000140580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026773	Pfkfb3	ENSMUST00000171188	ENSMUSP00000129122	TRANSLATION	protein_coding	-	CCDS50501.1	5	555	19	12.066	1.5	357.8	0	-4,-7	-	-	17.334	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000170196	ENSMUSP00000126305	TRANSLATION	protein_coding	-	CCDS50500.1	1	543	19	12.066	1.5	357.8	0	-4,-7	-	-	17.334	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000192827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026773	Pfkfb3	ENSMUST00000179584	ENSMUSP00000137130	TRANSLATION	protein_coding	-	CCDS79732.1	1	549	19	12.5	1.5	357.8	0	-4,-7	-	-	18.204	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000155167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026773	Pfkfb3	ENSMUST00000114846	ENSMUSP00000110495	TRANSLATION	protein_coding	-	CCDS15683.1	1	520	19	12.5	6.3	357.8	0	-4,-7	-	-	20.178	PRINCIPAL:3
ENSMUSG00000026773	Pfkfb3	ENSMUST00000100411	ENSMUSP00000097979	TRANSLATION	protein_coding	-	-	5	513	19	12.066	8.3	357.8	0	-4,-7	-	-	20.13	ALTERNATIVE:1
ENSMUSG00000026773	Pfkfb3	ENSMUST00000192949	ENSMUSP00000142296	TRANSLATION	protein_coding	-	CCDS79733.1	1	500	19	11.75	4.1	357.4	0	-4,-2	-	-	17.751	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000192844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026773	Pfkfb3	ENSMUST00000195779	ENSMUSP00000141445	TRANSLATION	nonsense_mediated_decay	-	-	5	327	12	6.75	0	345.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026773	Pfkfb3	ENSMUST00000150086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026773	Pfkfb3	ENSMUST00000049849	ENSMUSP00000050926	TRANSLATION	protein_coding	-	CCDS79731.1	1	514	19	12.066	8.3	357.8	0	-4,-7	-	-	20.13	ALTERNATIVE:1
ENSMUSG00000006800	Sulf2	ENSMUST00000139266	ENSMUSP00000154315	TRANSLATION	protein_coding	stop	-	5	225	3	1.56	0	80.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000006800	Sulf2	ENSMUST00000133395	ENSMUSP00000154724	TRANSLATION	protein_coding	stop	-	3	56	2	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000006800	Sulf2	ENSMUST00000088086	ENSMUSP00000085405	TRANSLATION	protein_coding	-	CCDS17086.1	1	875	5	4.39	1.5	330.1	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000006800	Sulf2	ENSMUST00000125503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006800	Sulf2	ENSMUST00000146497	ENSMUSP00000154557	TRANSLATION	protein_coding	-	CCDS17086.1	5	875	5	4.39	1.5	330.1	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000006800	Sulf2	ENSMUST00000109249	ENSMUSP00000104872	TRANSLATION	protein_coding	-	CCDS17086.1	1	875	5	4.39	1.5	330.1	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000006800	Sulf2	ENSMUST00000143996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023236	Scg5	ENSMUST00000024005	ENSMUSP00000024005	TRANSLATION	protein_coding	-	CCDS16561.1	1	212	0	0	7.5	38.2	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000023236	Scg5	ENSMUST00000139975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000137180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000094480	ENSMUSP00000092053	TRANSLATION	protein_coding	-	CCDS50734.1	5	858	0	2.88	0.5	130.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000001768	Rin2	ENSMUST00000110005	ENSMUSP00000105632	TRANSLATION	protein_coding	-	-	5	903	0	2.88	1.5	130.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000001768	Rin2	ENSMUST00000145874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000144278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000231581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000150449	ENSMUSP00000124078	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001768	Rin2	ENSMUST00000147976	ENSMUSP00000124206	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001768	Rin2	ENSMUST00000142847	ENSMUSP00000125476	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001768	Rin2	ENSMUST00000144661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001768	Rin2	ENSMUST00000149269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039804	Ncoa5	ENSMUST00000127545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039804	Ncoa5	ENSMUST00000141663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039804	Ncoa5	ENSMUST00000122070	ENSMUSP00000113166	TRANSLATION	protein_coding	-	-	5	406	0	2.6	5.3	0	0	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000039804	Ncoa5	ENSMUST00000153905	ENSMUSP00000116778	TRANSLATION	protein_coding	stop	-	2	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039804	Ncoa5	ENSMUST00000123347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039804	Ncoa5	ENSMUST00000126685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039804	Ncoa5	ENSMUST00000121377	ENSMUSP00000113872	TRANSLATION	protein_coding	-	-	1	299	0	0.8	0	0	0	-4,-5	-	-	1.848	MINOR
ENSMUSG00000039804	Ncoa5	ENSMUST00000040381	ENSMUSP00000046388	TRANSLATION	protein_coding	-	CCDS17068.1	1	579	0	2.6	5.3	0	0	-4,-7	-	-	8	PRINCIPAL:2
ENSMUSG00000017737	Mmp9	ENSMUST00000017881	ENSMUSP00000017881	TRANSLATION	protein_coding	-	CCDS17066.1	1	730	24	12.45	0.5	522.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000017737	Mmp9	ENSMUST00000137626	ENSMUSP00000120628	TRANSLATION	protein_coding	stop	-	3	67	0	1.75	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000017737	Mmp9	ENSMUST00000144917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017737	Mmp9	ENSMUST00000134382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074698	Csnk2a1	ENSMUST00000141597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074698	Csnk2a1	ENSMUST00000136063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074698	Csnk2a1	ENSMUST00000124791	ENSMUSP00000122505	TRANSLATION	protein_coding	stop	-	3	131	17	4	0	62	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074698	Csnk2a1	ENSMUST00000133119	ENSMUSP00000116853	TRANSLATION	protein_coding	stop	-	5	77	10	2.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074698	Csnk2a1	ENSMUST00000099224	ENSMUSP00000096829	TRANSLATION	protein_coding	-	CCDS16879.1	1	391	20	10.83	14.8	243.5	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000026985	Il1f8	ENSMUST00000028363	ENSMUSP00000028363	TRANSLATION	protein_coding	-	CCDS38063.1	1	183	0	2.8	0.5	78.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090625	Gm20721	ENSMUST00000168292	ENSMUSP00000127452	TRANSLATION	protein_coding	-	-	5	318	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027460	Angpt4	ENSMUST00000028955	ENSMUSP00000028955	TRANSLATION	protein_coding	-	CCDS16874.1	1	509	6	5.48	1.5	228.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000111869	Olfr342	ENSMUST00000216275	ENSMUSP00000149751	TRANSLATION	protein_coding	-	CCDS15975.1	5	312	0	0.42	1.5	188.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111869	Olfr342	ENSMUST00000074192	ENSMUSP00000073818	TRANSLATION	protein_coding	-	CCDS15975.1	-	312	0	0.42	1.5	188.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000087364	Gm13398	ENSMUST00000149378	ENSMUSP00000158962	TRANSLATION	protein_coding	-	-	1	61	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038696	Mapkap1	ENSMUST00000113126	ENSMUSP00000108751	TRANSLATION	protein_coding	-	CCDS15948.1	1	522	0	5.784	10.8	336.5	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000038696	Mapkap1	ENSMUST00000129633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038696	Mapkap1	ENSMUST00000149383	ENSMUSP00000141407	TRANSLATION	protein_coding	stop	-	5	171	0	0.42	0	106.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038696	Mapkap1	ENSMUST00000137021	ENSMUSP00000142280	TRANSLATION	nonsense_mediated_decay	start	-	5	40	0	0.27	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038696	Mapkap1	ENSMUST00000147337	ENSMUSP00000116494	TRANSLATION	protein_coding	-	CCDS15948.1	1	522	0	5.784	10.8	336.5	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000038696	Mapkap1	ENSMUST00000156967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038696	Mapkap1	ENSMUST00000141253	ENSMUSP00000141308	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038696	Mapkap1	ENSMUST00000113124	ENSMUSP00000108749	TRANSLATION	protein_coding	-	-	5	486	0	5.784	9.5	336.5	0	-4,-5	-	-	14.601	ALTERNATIVE:1
ENSMUSG00000038696	Mapkap1	ENSMUST00000113123	ENSMUSP00000108748	TRANSLATION	protein_coding	-	CCDS71035.1	5	330	0	4.74	9.5	195.2	0	-4,-7	-	-	6.513	MINOR
ENSMUSG00000038696	Mapkap1	ENSMUST00000138933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038696	Mapkap1	ENSMUST00000124443	ENSMUSP00000123301	TRANSLATION	protein_coding	stop	-	1	306	0	4.74	0	195.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000098789	Jmjd7	ENSMUST00000135365	ENSMUSP00000115076	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000098789	Jmjd7	ENSMUST00000129679	ENSMUSP00000115812	TRANSLATION	nonsense_mediated_decay	start	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098789	Jmjd7	ENSMUST00000130176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098789	Jmjd7	ENSMUST00000044675	ENSMUSP00000041220	TRANSLATION	protein_coding	-	CCDS50676.1	1	316	12	6.75	7.5	268.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000098789	Jmjd7	ENSMUST00000139862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039033	Tasp1	ENSMUST00000110079	ENSMUSP00000105706	TRANSLATION	protein_coding	-	CCDS16802.1	1	420	10	11.5	10.8	195.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039033	Tasp1	ENSMUST00000099304	ENSMUSP00000096907	TRANSLATION	protein_coding	-	CCDS50731.1	1	383	9	10.5	3.7	176.2	0	-4,-5	-	-	15.012	MINOR
ENSMUSG00000039033	Tasp1	ENSMUST00000124949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039033	Tasp1	ENSMUST00000046656	ENSMUSP00000039546	TRANSLATION	protein_coding	-	CCDS16802.1	1	420	10	11.5	10.8	195.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027079	Clp1	ENSMUST00000028475	ENSMUSP00000028475	TRANSLATION	protein_coding	-	CCDS16191.1	1	425	15	1.8	10.8	479.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027079	Clp1	ENSMUST00000165219	ENSMUSP00000129300	TRANSLATION	protein_coding	-	CCDS16191.1	1	425	15	1.8	10.8	479.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027079	Clp1	ENSMUST00000138231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026938	Fcna	ENSMUST00000028307	ENSMUSP00000028307	TRANSLATION	protein_coding	-	CCDS15785.1	1	334	6	4.3	1.5	285.2	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000026938	Fcna	ENSMUST00000142371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027641	Rbl1	ENSMUST00000141296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027641	Rbl1	ENSMUST00000029170	ENSMUSP00000029170	TRANSLATION	protein_coding	-	CCDS16974.1	1	1063	0	8.73	0.5	631.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027641	Rbl1	ENSMUST00000154721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027641	Rbl1	ENSMUST00000124518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075163	Olfr1107	ENSMUST00000099865	ENSMUSP00000097450	TRANSLATION	protein_coding	-	CCDS16279.1	-	312	0	0.24	3.9	177.6	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075163	Olfr1107	ENSMUST00000214049	ENSMUSP00000150135	TRANSLATION	protein_coding	-	CCDS16279.1	5	312	0	0.24	3.9	177.6	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000027650	Tti1	ENSMUST00000126541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027650	Tti1	ENSMUST00000124338	ENSMUSP00000116592	TRANSLATION	protein_coding	stop	-	3	182	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027650	Tti1	ENSMUST00000109522	ENSMUSP00000105148	TRANSLATION	protein_coding	-	CCDS16983.1	1	1085	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027650	Tti1	ENSMUST00000029179	ENSMUSP00000029179	TRANSLATION	protein_coding	-	CCDS16983.1	1	1085	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027377	Mall	ENSMUST00000028856	ENSMUSP00000028856	TRANSLATION	protein_coding	-	CCDS16708.1	1	154	0	0	8.8	39.8	0	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000034701	Neurod1	ENSMUST00000041099	ENSMUSP00000040364	TRANSLATION	protein_coding	-	CCDS16169.1	1	357	0	0.4	8.8	211.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026646	Suv39h2	ENSMUST00000027956	ENSMUSP00000027956	TRANSLATION	protein_coding	-	CCDS15652.1	1	477	33	5.4	0.5	181.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000026646	Suv39h2	ENSMUST00000060618	ENSMUSP00000054169	TRANSLATION	protein_coding	-	-	1	257	20	3.4	0	58.2	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000026646	Suv39h2	ENSMUST00000127540	ENSMUSP00000125485	TRANSLATION	nonsense_mediated_decay	-	-	1	116	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026646	Suv39h2	ENSMUST00000100458	ENSMUSP00000098026	TRANSLATION	protein_coding	start	-	1	375	29	5	0	172.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089859	Olfr1565	ENSMUST00000077123	ENSMUSP00000076371	TRANSLATION	protein_coding	-	CCDS57179.1	-	309	0	0.2	5.1	169.8	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000089859	Olfr1565	ENSMUST00000216915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089859	Olfr1565	ENSMUST00000214797	ENSMUSP00000148860	TRANSLATION	protein_coding	-	CCDS57179.1	3	309	0	0.2	5.1	169.8	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063275	Hacd1	ENSMUST00000131730	ENSMUSP00000141406	TRANSLATION	nonsense_mediated_decay	-	-	1	165	0	0	0.5	49.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000063275	Hacd1	ENSMUST00000091429	ENSMUSP00000088998	TRANSLATION	protein_coding	-	CCDS50504.1	1	165	0	0	0.5	49.5	1	-4,-5	-	-	0	MINOR
ENSMUSG00000063275	Hacd1	ENSMUST00000074854	ENSMUSP00000074397	TRANSLATION	protein_coding	-	CCDS50505.1	5	248	0	0	4.7	197.4	4	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000063275	Hacd1	ENSMUST00000114753	ENSMUSP00000110401	TRANSLATION	protein_coding	-	CCDS50505.1	1	248	0	0	4.7	197.4	4	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000052056	Zfp217	ENSMUST00000149088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052056	Zfp217	ENSMUST00000149318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052056	Zfp217	ENSMUST00000063710	ENSMUSP00000067334	TRANSLATION	protein_coding	-	CCDS17120.1	1	1041	24	1.16	0.5	57.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000052056	Zfp217	ENSMUST00000125162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052056	Zfp217	ENSMUST00000109155	ENSMUSP00000104783	TRANSLATION	protein_coding	-	CCDS17120.1	1	1041	24	1.16	0.5	57.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000079001	4930404H24Rik	ENSMUST00000109783	ENSMUSP00000105406	TRANSLATION	protein_coding	-	-	1	46	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000026830	Ermn	ENSMUST00000090940	ENSMUSP00000088458	TRANSLATION	protein_coding	-	CCDS16047.1	1	281	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027102	Hoxd8	ENSMUST00000074721	ENSMUSP00000088094	TRANSLATION	protein_coding	-	CCDS71077.1	1	288	0	1.264	0.5	72.7	0	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027102	Hoxd8	ENSMUST00000019749	ENSMUSP00000019749	TRANSLATION	protein_coding	-	CCDS16143.1	1	289	0	1.264	0.5	72.7	0	-2,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027102	Hoxd8	ENSMUST00000151380	ENSMUSP00000118904	TRANSLATION	protein_coding	-	CCDS79809.1	2	107	0	1.264	4.1	72.7	0	-4,0	-	-	13	ALTERNATIVE:2
ENSMUSG00000027525	Phactr3	ENSMUST00000103066	ENSMUSP00000099355	TRANSLATION	protein_coding	-	CCDS17158.1	1	558	0	3.25	4.1	53.8	0	-4,-6	-	-	13.098	PRINCIPAL:4
ENSMUSG00000027525	Phactr3	ENSMUST00000108917	ENSMUSP00000104545	TRANSLATION	protein_coding	-	CCDS50838.1	1	553	0	3.15	0.5	52.9	0	-4,-1	-	-	11.292	MINOR
ENSMUSG00000027525	Phactr3	ENSMUST00000133267	ENSMUSP00000158899	TRANSLATION	protein_coding	-	-	5	128	0	2.45	3.2	57.8	0	-4,0	-	-	11.472	MINOR
ENSMUSG00000027525	Phactr3	ENSMUST00000103065	ENSMUSP00000099354	TRANSLATION	protein_coding	-	CCDS17159.1	1	518	0	3.25	5.1	53.8	0	-4,-6	-	-	13.586	ALTERNATIVE:1
ENSMUSG00000027525	Phactr3	ENSMUST00000108915	ENSMUSP00000104543	TRANSLATION	protein_coding	-	CCDS50839.1	1	559	0	3.25	0.5	53.8	0	-4,-1	-	-	11.586	MINOR
ENSMUSG00000027525	Phactr3	ENSMUST00000141272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027525	Phactr3	ENSMUST00000108916	ENSMUSP00000104544	TRANSLATION	protein_coding	-	CCDS50837.1	1	554	0	3.25	0.5	53.8	0	-4,-1	-	-	11.586	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000154351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026854	Usp20	ENSMUST00000136588	ENSMUSP00000119197	TRANSLATION	protein_coding	start/stop	-	5	143	9	3.93	0	82.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000138161	ENSMUSP00000116696	TRANSLATION	protein_coding	stop	-	3	77	10	2.57	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000128295	ENSMUSP00000115613	TRANSLATION	protein_coding	stop	-	2	77	10	2.57	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000125601	ENSMUSP00000121699	TRANSLATION	protein_coding	stop	-	5	66	9	2.24	0	27	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000127776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026854	Usp20	ENSMUST00000170476	ENSMUSP00000127388	TRANSLATION	protein_coding	-	CCDS15893.1	1	916	20	11.704	5.1	344.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026854	Usp20	ENSMUST00000102849	ENSMUSP00000099913	TRANSLATION	protein_coding	-	CCDS15893.1	1	916	20	11.704	5.1	344.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000026854	Usp20	ENSMUST00000142232	ENSMUSP00000115347	TRANSLATION	protein_coding	stop	-	5	100	3	1.16	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026854	Usp20	ENSMUST00000154634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026854	Usp20	ENSMUST00000192882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026854	Usp20	ENSMUST00000061544	ENSMUSP00000060167	TRANSLATION	protein_coding	-	-	1	210	14	5.54	0	99.2	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000075167	Olfr1101	ENSMUST00000214411	ENSMUSP00000151171	TRANSLATION	protein_coding	-	CCDS16274.1	3	310	0	0	1.5	173.7	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075167	Olfr1101	ENSMUST00000099870	ENSMUSP00000097455	TRANSLATION	protein_coding	-	CCDS16274.1	-	310	0	0	1.5	173.7	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096729	Gm13695	ENSMUST00000099951	ENSMUSP00000097534	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096729	Gm13695	ENSMUST00000179504	ENSMUSP00000136120	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026839	Upp2	ENSMUST00000135737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026839	Upp2	ENSMUST00000230627	ENSMUSP00000154977	TRANSLATION	protein_coding	-	-	-	286	11	5.75	0	89	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000026839	Upp2	ENSMUST00000137007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026839	Upp2	ENSMUST00000229829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026839	Upp2	ENSMUST00000229923	ENSMUSP00000155044	TRANSLATION	protein_coding	-	-	-	306	10	5.43	0	74.4	0	-4,-7	-	-	14.712	MINOR
ENSMUSG00000026839	Upp2	ENSMUST00000071543	ENSMUSP00000071474	TRANSLATION	protein_coding	-	CCDS71055.1	1	325	10	5.49	0.5	78	0	-4,-1	-	-	15.072	MINOR
ENSMUSG00000026839	Upp2	ENSMUST00000230667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026839	Upp2	ENSMUST00000102755	ENSMUSP00000099816	TRANSLATION	protein_coding	-	CCDS16051.1	1	320	11	6.25	6.3	89	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000026839	Upp2	ENSMUST00000059102	ENSMUSP00000060437	TRANSLATION	protein_coding	-	CCDS79797.1	1	338	11	6.25	0.5	89	0	-4,-6	-	-	18	MINOR
ENSMUSG00000026839	Upp2	ENSMUST00000128864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075187	Olfr1057	ENSMUST00000099892	ENSMUSP00000097477	TRANSLATION	protein_coding	-	CCDS16253.1	-	315	0	0.3	6.3	158.3	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075187	Olfr1057	ENSMUST00000217435	ENSMUSP00000150623	TRANSLATION	protein_coding	-	CCDS16253.1	5	315	0	0.3	6.3	158.3	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039086	Ss18l1	ENSMUST00000041126	ENSMUSP00000041288	TRANSLATION	protein_coding	-	CCDS17167.1	1	402	0	0	10.2	108.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000042662	Dusp15	ENSMUST00000185197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042662	Dusp15	ENSMUST00000123121	ENSMUSP00000123090	TRANSLATION	protein_coding	-	CCDS50754.1	3	235	10	4.03	6.5	105.6	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000042662	Dusp15	ENSMUST00000109811	ENSMUSP00000105436	TRANSLATION	protein_coding	-	-	1	78	0	0.33	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000042662	Dusp15	ENSMUST00000037715	ENSMUSP00000045815	TRANSLATION	protein_coding	-	CCDS16902.1	1	105	2	3.13	0.5	42.1	0	-4,-6	-	-	7.056	MINOR
ENSMUSG00000075171	Olfr1095	ENSMUST00000099874	ENSMUSP00000097459	TRANSLATION	protein_coding	-	CCDS16270.1	-	308	0	0.36	3.9	158.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027583	Zbtb46	ENSMUST00000146446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027583	Zbtb46	ENSMUST00000180222	ENSMUSP00000137014	TRANSLATION	protein_coding	-	CCDS50854.1	1	600	8	2.4	1.5	144.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027583	Zbtb46	ENSMUST00000029106	ENSMUSP00000029106	TRANSLATION	protein_coding	-	CCDS50854.1	5	600	8	2.4	1.5	144.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027583	Zbtb46	ENSMUST00000155535	ENSMUSP00000125584	TRANSLATION	protein_coding	stop	-	3	42	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027583	Zbtb46	ENSMUST00000087409	ENSMUSP00000084672	TRANSLATION	protein_coding	-	CCDS17212.1	1	434	0	1.2	0.5	86.8	0	-4,-5	-	-	5.556	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000102938	ENSMUSP00000100002	TRANSLATION	protein_coding	-	CCDS59635.1	1	1289	53	13.16	0.5	287.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036893	Ehmt1	ENSMUST00000134775	ENSMUSP00000141940	TRANSLATION	nonsense_mediated_decay	start	-	1	107	0	2	0	46.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000046227	ENSMUSP00000046077	TRANSLATION	protein_coding	-	CCDS59636.1	5	1248	53	13.16	0.5	287.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036893	Ehmt1	ENSMUST00000152636	ENSMUSP00000141460	TRANSLATION	nonsense_mediated_decay	start	-	3	203	0	3.31	0	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000152161	ENSMUSP00000119854	TRANSLATION	protein_coding	stop	-	5	362	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000150379	ENSMUSP00000123187	TRANSLATION	protein_coding	stop	-	1	286	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000207383	ENSMUSP00000146832	TRANSLATION	protein_coding	start/stop	-	5	232	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000198923	ENSMUSP00000143189	TRANSLATION	protein_coding	start/stop	-	3	254	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000200655	ENSMUSP00000142861	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000139000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036893	Ehmt1	ENSMUST00000147147	ENSMUSP00000119057	TRANSLATION	protein_coding	-	CCDS15740.1	1	1296	53	13.16	0.5	287.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000036893	Ehmt1	ENSMUST00000114432	ENSMUSP00000110075	TRANSLATION	protein_coding	-	CCDS59634.1	5	1243	53	13.16	0.5	287.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036893	Ehmt1	ENSMUST00000138805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036893	Ehmt1	ENSMUST00000150836	ENSMUSP00000141912	TRANSLATION	nonsense_mediated_decay	start	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000091348	ENSMUSP00000088906	TRANSLATION	protein_coding	-	-	5	1288	53	13.16	0.5	287.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036893	Ehmt1	ENSMUST00000152325	ENSMUSP00000123387	TRANSLATION	protein_coding	start/stop	-	3	224	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036893	Ehmt1	ENSMUST00000144672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036893	Ehmt1	ENSMUST00000114418	ENSMUSP00000110061	TRANSLATION	protein_coding	-	-	5	1248	53	13.16	0.5	287.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033850	Olfr1015	ENSMUST00000215945	ENSMUSP00000148957	TRANSLATION	protein_coding	-	CCDS16220.1	5	312	0	0.36	6.4	165.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033850	Olfr1015	ENSMUST00000214726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033850	Olfr1015	ENSMUST00000047870	ENSMUSP00000046301	TRANSLATION	protein_coding	-	CCDS16220.1	-	312	0	0.36	6.4	165.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027207	Galk2	ENSMUST00000134337	ENSMUSP00000120728	TRANSLATION	protein_coding	stop	-	5	182	15	4.13	0	112.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027207	Galk2	ENSMUST00000135782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027207	Galk2	ENSMUST00000028636	ENSMUSP00000028636	TRANSLATION	protein_coding	-	CCDS16680.1	1	447	23	8.778	5.3	181	0	-4,-6	-	-	18.734	PRINCIPAL:3
ENSMUSG00000027207	Galk2	ENSMUST00000140873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027207	Galk2	ENSMUST00000110454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027207	Galk2	ENSMUST00000134798	ENSMUSP00000118930	TRANSLATION	protein_coding	stop	-	5	129	9	3.495	0	67.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027207	Galk2	ENSMUST00000125084	ENSMUSP00000119902	TRANSLATION	protein_coding	stop	-	3	91	9	2.5	0	84.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027207	Galk2	ENSMUST00000131643	ENSMUSP00000121752	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027207	Galk2	ENSMUST00000094604	ENSMUSP00000092186	TRANSLATION	protein_coding	-	CCDS71134.1	1	458	23	9.41	3.5	181	0	-4,-7	-	-	19.162	ALTERNATIVE:2
ENSMUSG00000049999	Ppp1r3d	ENSMUST00000058678	ENSMUSP00000061402	TRANSLATION	protein_coding	-	CCDS38371.1	-	279	0	0.4	1.5	94.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027569	Mrgbp	ENSMUST00000150757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027569	Mrgbp	ENSMUST00000169630	ENSMUSP00000127747	TRANSLATION	protein_coding	-	CCDS17178.1	1	204	0	1.75	1.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027569	Mrgbp	ENSMUST00000123609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027569	Mrgbp	ENSMUST00000130277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027569	Mrgbp	ENSMUST00000029085	ENSMUSP00000029085	TRANSLATION	protein_coding	-	CCDS17178.1	1	204	0	1.75	1.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027569	Mrgbp	ENSMUST00000149969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026991	Pkp4	ENSMUST00000183625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000124127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000112577	ENSMUSP00000108196	TRANSLATION	protein_coding	-	-	5	849	0	7.84	1.7	93.6	0	-4,-5	-	-	12.126	MINOR
ENSMUSG00000026991	Pkp4	ENSMUST00000123908	ENSMUSP00000122152	TRANSLATION	protein_coding	stop	-	1	803	0	5.1	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026991	Pkp4	ENSMUST00000184332	ENSMUSP00000139161	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026991	Pkp4	ENSMUST00000184705	ENSMUSP00000138895	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026991	Pkp4	ENSMUST00000183359	ENSMUSP00000139141	TRANSLATION	nonsense_mediated_decay	-	-	5	215	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026991	Pkp4	ENSMUST00000151452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000168631	ENSMUSP00000129836	TRANSLATION	protein_coding	-	CCDS50588.1	1	1147	0	7.84	7.5	93.6	0	-4,-5	-	-	14.802	ALTERNATIVE:1
ENSMUSG00000026991	Pkp4	ENSMUST00000102754	ENSMUSP00000099815	TRANSLATION	protein_coding	-	CCDS16052.1	1	1190	0	7.84	7.5	93.6	0	-4,-5	-	-	14.802	PRINCIPAL:3
ENSMUSG00000026991	Pkp4	ENSMUST00000126749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000122888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000124725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026991	Pkp4	ENSMUST00000037903	ENSMUSP00000042249	TRANSLATION	protein_coding	-	-	5	1163	0	7.94	0	93.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000060131	Atp8b4	ENSMUST00000040149	ENSMUSP00000047302	TRANSLATION	protein_coding	-	CCDS50698.1	1	1194	6	2.279	1.5	448.3	13	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000060131	Atp8b4	ENSMUST00000147517	ENSMUSP00000114252	TRANSLATION	nonsense_mediated_decay	-	-	1	435	4	0.4	0	125.2	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000060131	Atp8b4	ENSMUST00000040128	ENSMUSP00000046444	TRANSLATION	protein_coding	-	CCDS50698.1	5	1194	6	2.279	1.5	448.3	13	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000060131	Atp8b4	ENSMUST00000134977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060131	Atp8b4	ENSMUST00000129187	ENSMUSP00000118651	TRANSLATION	protein_coding	stop	-	1	426	4	0.499	0	125.3	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000027014	Cwc22	ENSMUST00000111818	ENSMUSP00000107449	TRANSLATION	protein_coding	-	CCDS57178.1	1	902	0	17.21	0.5	130.7	0	-4,-2	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000027014	Cwc22	ENSMUST00000111824	ENSMUSP00000107455	TRANSLATION	protein_coding	-	-	1	723	0	16.21	0	130.7	0	-4,-2	-	-	9.702	MINOR
ENSMUSG00000027014	Cwc22	ENSMUST00000127289	ENSMUSP00000122338	TRANSLATION	protein_coding	stop	-	5	139	0	3.53	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027014	Cwc22	ENSMUST00000149012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027014	Cwc22	ENSMUST00000127351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027014	Cwc22	ENSMUST00000139842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027014	Cwc22	ENSMUST00000128963	ENSMUSP00000115067	TRANSLATION	protein_coding	stop	-	2	109	0	2.73	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027014	Cwc22	ENSMUST00000156863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027014	Cwc22	ENSMUST00000111821	ENSMUSP00000107452	TRANSLATION	protein_coding	-	CCDS16165.1	5	908	0	17.045	0.5	130.7	0	-4,-2	-	-	11.37	PRINCIPAL:3
ENSMUSG00000027014	Cwc22	ENSMUST00000111819	ENSMUSP00000107450	TRANSLATION	protein_coding	-	CCDS71080.1	1	903	0	17.36	0.5	130.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027014	Cwc22	ENSMUST00000065889	ENSMUSP00000064947	TRANSLATION	protein_coding	-	CCDS16165.1	1	908	0	17.045	0.5	130.7	0	-4,-2	-	-	11.37	PRINCIPAL:3
ENSMUSG00000027014	Cwc22	ENSMUST00000137494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027014	Cwc22	ENSMUST00000144727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067786	Nnat	ENSMUST00000173595	ENSMUSP00000133397	TRANSLATION	protein_coding	-	CCDS71175.1	2	125	0	0	6.3	0	1	-2,-6	-	-	2.445	ALTERNATIVE:1
ENSMUSG00000067786	Nnat	ENSMUST00000109526	ENSMUSP00000105152	TRANSLATION	protein_coding	-	CCDS38306.1	1	81	0	0	7.5	0	1	-2,-5	-	-	3	PRINCIPAL:4
ENSMUSG00000067786	Nnat	ENSMUST00000173041	ENSMUSP00000134109	TRANSLATION	protein_coding	-	-	5	79	0	0	0	0	1	-1,-6	-	-	0	MINOR
ENSMUSG00000067786	Nnat	ENSMUST00000153739	ENSMUSP00000129821	TRANSLATION	protein_coding	-	CCDS38307.1	1	54	0	0	6.3	0	1	-1,-6	-	-	2.445	ALTERNATIVE:1
ENSMUSG00000067786	Nnat	ENSMUST00000173793	ENSMUSP00000133487	TRANSLATION	protein_coding	-	-	5	79	0	0	0	0	1	-1,-6	-	-	0	MINOR
ENSMUSG00000067786	Nnat	ENSMUST00000172487	ENSMUSP00000134415	TRANSLATION	protein_coding	-	-	5	112	0	0	0	0	1	-3,-7	-	-	0	MINOR
ENSMUSG00000067786	Nnat	ENSMUST00000152605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067786	Nnat	ENSMUST00000088484	ENSMUSP00000085836	TRANSLATION	protein_coding	-	CCDS71174.1	2	129	0	0	1.5	0	1	-1,-6	-	-	0.231	MINOR
ENSMUSG00000067786	Nnat	ENSMUST00000134513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067786	Nnat	ENSMUST00000173839	ENSMUSP00000133394	TRANSLATION	protein_coding	-	CCDS79857.1	1	63	0	0	1.5	0	1	-1,-6	-	-	0.231	MINOR
ENSMUSG00000078875	Gm14419	ENSMUST00000178182	ENSMUSP00000137257	TRANSLATION	protein_coding	start	-	1	63	0	1.45	1.5	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078875	Gm14419	ENSMUST00000108975	ENSMUSP00000104603	TRANSLATION	protein_coding	-	-	1	71	0	1.45	0	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078875	Gm14419	ENSMUST00000126358	ENSMUSP00000118666	TRANSLATION	protein_coding	-	-	5	582	71	2.05	0	461.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078875	Gm14419	ENSMUST00000156844	ENSMUSP00000117002	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000067578	Cbln4	ENSMUST00000087950	ENSMUSP00000085263	TRANSLATION	protein_coding	-	CCDS17126.1	1	198	0	2.7	6.3	85.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000017000	Svs6	ENSMUST00000017144	ENSMUSP00000017144	TRANSLATION	protein_coding	-	CCDS17031.1	1	99	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000038085	Cnbd2	ENSMUST00000073942	ENSMUSP00000073598	TRANSLATION	protein_coding	-	-	1	425	14	3.15	0	54.5	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000038085	Cnbd2	ENSMUST00000037096	ENSMUSP00000041268	TRANSLATION	protein_coding	-	CCDS50778.1	1	673	14	3.15	0.5	54.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038085	Cnbd2	ENSMUST00000109580	ENSMUSP00000105208	TRANSLATION	protein_coding	-	-	1	544	14	2.95	0	54.5	0	-4,-2	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000038085	Cnbd2	ENSMUST00000133056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038085	Cnbd2	ENSMUST00000125395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038085	Cnbd2	ENSMUST00000154227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026739	Bmi1	ENSMUST00000134734	ENSMUSP00000121876	TRANSLATION	protein_coding	stop	-	5	105	8	3.33	0	44	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026739	Bmi1	ENSMUST00000150834	ENSMUSP00000119331	TRANSLATION	protein_coding	stop	-	5	159	8	4.63	0	44	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026739	Bmi1	ENSMUST00000132014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026739	Bmi1	ENSMUST00000051929	ENSMUSP00000110300	TRANSLATION	protein_coding	-	CCDS15711.1	1	324	8	6.61	10.8	121.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026739	Bmi1	ENSMUST00000156284	ENSMUSP00000118730	TRANSLATION	protein_coding	stop	-	3	197	8	5.71	0	82.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026739	Bmi1	ENSMUST00000028071	ENSMUSP00000028071	TRANSLATION	protein_coding	-	CCDS15711.1	1	324	8	6.61	10.8	121.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000026739	Bmi1	ENSMUST00000147365	ENSMUSP00000118273	TRANSLATION	protein_coding	stop	-	5	75	8	2	0	44	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026915	Strbp	ENSMUST00000135488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026915	Strbp	ENSMUST00000144206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026915	Strbp	ENSMUST00000155237	ENSMUSP00000122263	TRANSLATION	protein_coding	stop	-	5	128	2	1.6	0	25.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026915	Strbp	ENSMUST00000204569	ENSMUSP00000144874	TRANSLATION	nonsense_mediated_decay	start	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026915	Strbp	ENSMUST00000145808	ENSMUSP00000120163	TRANSLATION	protein_coding	stop	-	5	167	2	2.6	0	42.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026915	Strbp	ENSMUST00000203861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026915	Strbp	ENSMUST00000028279	ENSMUSP00000028279	TRANSLATION	protein_coding	-	CCDS38118.1	5	672	4	11.571	10.8	356.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000026915	Strbp	ENSMUST00000072186	ENSMUSP00000072047	TRANSLATION	protein_coding	-	CCDS38118.1	1	672	4	11.571	10.8	356.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000026915	Strbp	ENSMUST00000183690	ENSMUSP00000139145	TRANSLATION	nonsense_mediated_decay	-	-	1	648	4	11.571	7.5	356.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033396	Spg11	ENSMUST00000036450	ENSMUSP00000037543	TRANSLATION	protein_coding	-	CCDS50687.1	1	2430	0	0	1.5	339.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033396	Spg11	ENSMUST00000135847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033396	Spg11	ENSMUST00000133145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075224	Lrrc55	ENSMUST00000234905	ENSMUSP00000157170	TRANSLATION	nonsense_mediated_decay	-	-	-	298	0	0.8	0	53.1	2	0,-3	-	-	-1	MINOR
ENSMUSG00000075224	Lrrc55	ENSMUST00000234267	ENSMUSP00000157165	TRANSLATION	protein_coding	-	-	-	298	0	0.8	0	53.1	2	0,-3	-	-	12	MINOR
ENSMUSG00000075224	Lrrc55	ENSMUST00000111601	ENSMUSP00000107228	TRANSLATION	protein_coding	-	CCDS38167.1	5	311	0	0.8	5.2	53.1	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075224	Lrrc55	ENSMUST00000099930	ENSMUSP00000097514	TRANSLATION	protein_coding	-	CCDS38167.1	1	311	0	0.8	5.2	53.1	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027363	Usp8	ENSMUST00000028841	ENSMUSP00000028841	TRANSLATION	protein_coding	-	CCDS16687.1	1	1080	8	13.05	1.5	405.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027363	Usp8	ENSMUST00000138859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027363	Usp8	ENSMUST00000110416	ENSMUSP00000106046	TRANSLATION	protein_coding	-	CCDS57185.1	1	1091	8	12.885	0.5	403.8	0	-4,-5	-	-	17.55	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000183538	ENSMUSP00000138916	TRANSLATION	nonsense_mediated_decay	-	-	1	235	5	2.624	0	69.3	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000095045	ENSMUSP00000092655	TRANSLATION	protein_coding	-	CCDS38105.1	1	299	10	3.648	8.3	120.4	1	-2,-5	-	-	20.802	PRINCIPAL:1
ENSMUSG00000026811	St6galnac6	ENSMUST00000072111	ENSMUSP00000071983	TRANSLATION	protein_coding	-	CCDS15923.1	5	333	10	3.648	5.3	120.4	1	-4,-7	-	-	19.569	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000143625	ENSMUSP00000141437	TRANSLATION	protein_coding	stop	-	2	41	3	0.6	0	24.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000140983	ENSMUSP00000114934	TRANSLATION	protein_coding	stop	-	5	229	8	3.422	2	100.3	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000131229	ENSMUSP00000115430	TRANSLATION	protein_coding	-	CCDS15922.1	2	313	10	3.748	1.5	120.4	1	-4,-7	-	-	18.204	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000113290	ENSMUSP00000108915	TRANSLATION	protein_coding	-	CCDS38105.1	5	299	10	3.648	8.3	120.4	1	-2,-5	-	-	20.802	PRINCIPAL:1
ENSMUSG00000026811	St6galnac6	ENSMUST00000129165	ENSMUSP00000121833	TRANSLATION	protein_coding	stop	-	2	39	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000095044	ENSMUSP00000092654	TRANSLATION	protein_coding	-	CCDS15923.1	1	333	10	3.648	5.3	120.4	1	-4,-7	-	-	19.569	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000126636	ENSMUSP00000141412	TRANSLATION	protein_coding	stop	-	2	28	0	0.83	0	31.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000081879	ENSMUSP00000080555	TRANSLATION	protein_coding	-	-	1	335	10	3.648	0	120.4	1	-4,-5	-	-	17.802	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000128811	ENSMUSP00000118893	TRANSLATION	protein_coding	stop	-	2	108	5	1.29	0	35.5	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000026811	St6galnac6	ENSMUST00000149220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000228797	ENSMUSP00000153734	TRANSLATION	protein_coding	-	-	-	1957	0	2.46	0.5	153.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037110	Ralgapa2	ENSMUST00000148784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000146307	ENSMUSP00000114547	TRANSLATION	nonsense_mediated_decay	start	-	2	834	0	1.79	0	122.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037110	Ralgapa2	ENSMUST00000131824	ENSMUSP00000122039	TRANSLATION	protein_coding	-	-	5	1872	0	2.46	1.2	153.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037110	Ralgapa2	ENSMUST00000109986	ENSMUSP00000105613	TRANSLATION	protein_coding	-	CCDS16831.2	5	1910	0	2.46	0.5	153.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000037110	Ralgapa2	ENSMUST00000146024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000124709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000149499	ENSMUSP00000122017	TRANSLATION	protein_coding	start	-	5	1567	0	2.46	0	153.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037110	Ralgapa2	ENSMUST00000135974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000109982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037110	Ralgapa2	ENSMUST00000124583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074680	Defb26	ENSMUST00000099205	ENSMUSP00000096811	TRANSLATION	protein_coding	-	CCDS16888.1	1	186	0	0	0.5	32.3	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000068479	Mfap1a	ENSMUST00000089926	ENSMUSP00000087372	TRANSLATION	protein_coding	-	CCDS16648.1	1	439	0	2	15	261.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000026792	Lrsam1	ENSMUST00000028132	ENSMUSP00000028132	TRANSLATION	protein_coding	-	CCDS15935.1	1	727	0	7.846	4	114	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026792	Lrsam1	ENSMUST00000145699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026792	Lrsam1	ENSMUST00000133832	ENSMUSP00000117194	TRANSLATION	protein_coding	stop	-	3	128	0	2.86	0	37.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000147528	ENSMUSP00000122877	TRANSLATION	protein_coding	stop	-	3	124	0	2.86	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000127321	ENSMUSP00000115830	TRANSLATION	protein_coding	stop	-	3	129	0	2.86	0	37.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000191838	ENSMUSP00000141713	TRANSLATION	nonsense_mediated_decay	-	-	2	84	0	0.76	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000195776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026792	Lrsam1	ENSMUST00000124492	ENSMUSP00000118604	TRANSLATION	protein_coding	stop	-	5	58	0	1.26	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000113200	ENSMUSP00000108825	TRANSLATION	protein_coding	-	CCDS15935.1	5	727	0	7.846	4	114	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000026792	Lrsam1	ENSMUST00000138015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026792	Lrsam1	ENSMUST00000145578	ENSMUSP00000122711	TRANSLATION	protein_coding	stop	-	3	55	0	0.76	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026792	Lrsam1	ENSMUST00000195713	ENSMUSP00000141675	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0.198	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038523	1700003F12Rik	ENSMUST00000109709	ENSMUSP00000105331	TRANSLATION	protein_coding	-	-	3	210	0	0	0.5	337	0	-4,-5	-	-	5.1	MINOR
ENSMUSG00000038523	1700003F12Rik	ENSMUST00000135641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038523	1700003F12Rik	ENSMUST00000045116	ENSMUSP00000035523	TRANSLATION	protein_coding	-	CCDS16933.1	1	197	0	0	0.5	352	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027087	Itgav	ENSMUST00000125402	ENSMUSP00000118016	TRANSLATION	protein_coding	start	-	3	120	0	2.45	0	26.3	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027087	Itgav	ENSMUST00000131192	ENSMUSP00000121295	TRANSLATION	protein_coding	start	-	5	59	0	0.45	0	26.3	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000027087	Itgav	ENSMUST00000028499	ENSMUSP00000028499	TRANSLATION	protein_coding	-	CCDS16181.1	1	1044	35	24.45	0.5	530.7	3	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000027087	Itgav	ENSMUST00000148256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027087	Itgav	ENSMUST00000125360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027087	Itgav	ENSMUST00000155521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027087	Itgav	ENSMUST00000141725	ENSMUSP00000122730	TRANSLATION	protein_coding	stop	-	1	135	0	3	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000027087	Itgav	ENSMUST00000111740	ENSMUSP00000107369	TRANSLATION	protein_coding	-	-	5	1008	35	23.2	0	530.7	3	3,-1	-	-	15.498	MINOR
ENSMUSG00000027087	Itgav	ENSMUST00000151463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042814	Mcts2	ENSMUST00000062148	ENSMUSP00000100534	TRANSLATION	protein_coding	-	CCDS38281.1	-	181	0	1	19.5	70.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000026734	4921504E06Rik	ENSMUST00000131199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026734	4921504E06Rik	ENSMUST00000062060	ENSMUSP00000058720	TRANSLATION	protein_coding	-	CCDS15716.1	1	560	0	0	0.5	214.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000138959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000150205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000130396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000136883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000139968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000131937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000126898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000131315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000133380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000050003	ENSMUSP00000058055	TRANSLATION	protein_coding	-	CCDS15885.1	1	375	0	0	1.5	60.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000129484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000140168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044320	1700001O22Rik	ENSMUST00000135556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026812	Tsc1	ENSMUST00000113867	ENSMUSP00000109498	TRANSLATION	protein_coding	-	CCDS71013.1	1	1155	0	1	0.5	960.7	1	-4,-5	-	-	10.584	MINOR
ENSMUSG00000026812	Tsc1	ENSMUST00000028155	ENSMUSP00000028155	TRANSLATION	protein_coding	-	CCDS15844.1	1	1160	0	1	0.5	981.6	1	-4,-5	-	-	11.838	PRINCIPAL:3
ENSMUSG00000026812	Tsc1	ENSMUST00000133565	ENSMUSP00000120888	TRANSLATION	nonsense_mediated_decay	-	-	5	459	0	0	0	670.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026812	Tsc1	ENSMUST00000125715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026812	Tsc1	ENSMUST00000113869	ENSMUSP00000109500	TRANSLATION	protein_coding	-	CCDS79762.1	1	1161	0	1	0.5	984.3	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026812	Tsc1	ENSMUST00000139642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026812	Tsc1	ENSMUST00000124507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026812	Tsc1	ENSMUST00000153625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026812	Tsc1	ENSMUST00000150274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026812	Tsc1	ENSMUST00000156857	ENSMUSP00000115380	TRANSLATION	nonsense_mediated_decay	-	-	5	368	0	0	0	583	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000026812	Tsc1	ENSMUST00000113870	ENSMUSP00000109501	TRANSLATION	protein_coding	-	CCDS15844.1	1	1160	0	1	0.5	981.6	1	-4,-5	-	-	11.838	PRINCIPAL:3
ENSMUSG00000056718	Gm13199	ENSMUST00000142918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056718	Gm13199	ENSMUST00000071016	ENSMUSP00000063314	TRANSLATION	protein_coding	-	-	1	125	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000027223	Mapk8ip1	ENSMUST00000111279	ENSMUSP00000106910	TRANSLATION	protein_coding	-	CCDS57180.1	1	698	0	3.9	1.5	170.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027223	Mapk8ip1	ENSMUST00000050312	ENSMUSP00000050773	TRANSLATION	protein_coding	-	CCDS16446.1	1	707	0	3.9	0.5	170.9	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000027223	Mapk8ip1	ENSMUST00000149653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075132	Olfr1173	ENSMUST00000216887	ENSMUSP00000149617	TRANSLATION	protein_coding	-	CCDS16330.1	-	312	0	0	0.5	157.5	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000075132	Olfr1173	ENSMUST00000099830	ENSMUSP00000097418	TRANSLATION	protein_coding	-	CCDS16330.1	5	312	0	0	0.5	157.5	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000026875	Traf1	ENSMUST00000156479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026875	Traf1	ENSMUST00000135870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026875	Traf1	ENSMUST00000113064	ENSMUSP00000108687	TRANSLATION	protein_coding	-	CCDS15956.1	1	409	9	3.8	1.5	56.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026875	Traf1	ENSMUST00000141238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026875	Traf1	ENSMUST00000028234	ENSMUSP00000028234	TRANSLATION	protein_coding	-	CCDS15956.1	5	409	9	3.8	1.5	56.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026875	Traf1	ENSMUST00000201690	ENSMUSP00000144189	TRANSLATION	protein_coding	-	-	3	71	6	0	0	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000026875	Traf1	ENSMUST00000172159	ENSMUSP00000130759	TRANSLATION	protein_coding	-	CCDS15956.1	1	409	9	3.8	1.5	56.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026875	Traf1	ENSMUST00000201335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026875	Traf1	ENSMUST00000129131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000139807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000141262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000139490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000094835	ENSMUSP00000092431	TRANSLATION	protein_coding	-	-	1	234	0	0	1.2	0	0	-4,-7	-	-	0.076	MINOR
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000132092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000102594	ENSMUSP00000099654	TRANSLATION	protein_coding	-	CCDS16431.1	1	331	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:3
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000064652	ENSMUSP00000067770	TRANSLATION	protein_coding	-	CCDS79823.1	1	326	0	0	5.1	0	0	-4,-5	-	-	1.548	ALTERNATIVE:1
ENSMUSG00000040591	1110051M20Rik	ENSMUST00000145573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027166	Dnajc24	ENSMUST00000133569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027166	Dnajc24	ENSMUST00000102555	ENSMUSP00000099615	TRANSLATION	protein_coding	-	CCDS16501.1	1	148	4	3.83	8.8	110	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027166	Dnajc24	ENSMUST00000151581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027166	Dnajc24	ENSMUST00000155811	ENSMUSP00000122029	TRANSLATION	protein_coding	start	-	2	116	4	2.75	0	98.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027166	Dnajc24	ENSMUST00000124163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027429	Sec23b	ENSMUST00000149697	ENSMUSP00000122819	TRANSLATION	protein_coding	stop	-	2	122	4	2.75	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027429	Sec23b	ENSMUST00000155876	ENSMUSP00000122884	TRANSLATION	protein_coding	stop	-	3	138	4	3.25	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027429	Sec23b	ENSMUST00000143921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027429	Sec23b	ENSMUST00000146487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027429	Sec23b	ENSMUST00000028916	ENSMUSP00000028916	TRANSLATION	protein_coding	-	CCDS16822.1	1	767	4	17.525	17	580.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027429	Sec23b	ENSMUST00000155258	ENSMUSP00000123690	TRANSLATION	protein_coding	stop	-	3	58	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027429	Sec23b	ENSMUST00000128210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027429	Sec23b	ENSMUST00000143573	ENSMUSP00000120972	TRANSLATION	protein_coding	stop	-	2	278	4	5.775	0	186.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014353	Tmem87b	ENSMUST00000110325	ENSMUSP00000105954	TRANSLATION	protein_coding	-	CCDS38234.1	1	555	0	0	1.5	335.5	6	1,-3	-	-	5.796	PRINCIPAL:2
ENSMUSG00000014353	Tmem87b	ENSMUST00000143686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014353	Tmem87b	ENSMUST00000152210	ENSMUSP00000119093	TRANSLATION	protein_coding	start	-	1	548	0	0	0	318.9	6	4,-1	-	-	-1	MINOR
ENSMUSG00000014353	Tmem87b	ENSMUST00000143398	ENSMUSP00000159105	TRANSLATION	protein_coding	-	-	5	555	0	0	1.5	338.9	6	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000014353	Tmem87b	ENSMUST00000126160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040007	Bahd1	ENSMUST00000036578	ENSMUSP00000043130	TRANSLATION	protein_coding	-	CCDS38202.1	1	772	0	0	1.5	50	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040007	Bahd1	ENSMUST00000151162	ENSMUSP00000118998	TRANSLATION	protein_coding	stop	-	3	192	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023216	Epb42	ENSMUST00000145812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023216	Epb42	ENSMUST00000102490	ENSMUSP00000099548	TRANSLATION	protein_coding	-	CCDS16631.1	1	691	0	8.72	1.5	299.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023216	Epb42	ENSMUST00000124703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023216	Epb42	ENSMUST00000023987	ENSMUSP00000023987	TRANSLATION	protein_coding	-	-	1	673	0	7.1	0	202.9	0	-4,-5	-	-	2.97	MINOR
ENSMUSG00000023216	Epb42	ENSMUST00000152217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023216	Epb42	ENSMUST00000147444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023216	Epb42	ENSMUST00000128360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026829	Gbgt1	ENSMUST00000028172	ENSMUSP00000028172	TRANSLATION	protein_coding	-	CCDS15839.1	1	347	18	2.68	0.5	504.2	1	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026829	Gbgt1	ENSMUST00000163121	ENSMUSP00000127071	TRANSLATION	protein_coding	-	CCDS15839.1	5	347	18	2.68	0.5	504.2	1	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026829	Gbgt1	ENSMUST00000127958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027575	Arfgap1	ENSMUST00000134519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027575	Arfgap1	ENSMUST00000108860	ENSMUSP00000104488	TRANSLATION	protein_coding	-	CCDS50843.1	1	392	4	3.75	1.5	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000029092	ENSMUSP00000029092	TRANSLATION	protein_coding	-	CCDS17190.1	1	414	4	3.75	1.5	113.7	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000027575	Arfgap1	ENSMUST00000136590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027575	Arfgap1	ENSMUST00000150507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027575	Arfgap1	ENSMUST00000108859	ENSMUSP00000104487	TRANSLATION	protein_coding	-	CCDS50843.1	1	392	4	3.75	1.5	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000148908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027575	Arfgap1	ENSMUST00000145629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027575	Arfgap1	ENSMUST00000184394	ENSMUSP00000138843	TRANSLATION	protein_coding	-	-	5	402	4	3.75	0	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000185115	ENSMUSP00000139222	TRANSLATION	protein_coding	-	-	5	424	4	3.75	1.5	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000108862	ENSMUSP00000104490	TRANSLATION	protein_coding	-	CCDS50842.1	1	394	4	3.75	1.5	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000108861	ENSMUSP00000104489	TRANSLATION	protein_coding	-	CCDS50842.1	1	394	4	3.75	1.5	113.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000027575	Arfgap1	ENSMUST00000132627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027575	Arfgap1	ENSMUST00000138706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033498	Strc	ENSMUST00000129136	ENSMUSP00000118211	TRANSLATION	nonsense_mediated_decay	start	-	5	108	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033498	Strc	ENSMUST00000150332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033498	Strc	ENSMUST00000134443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033498	Strc	ENSMUST00000149219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033498	Strc	ENSMUST00000038389	ENSMUSP00000039378	TRANSLATION	protein_coding	-	CCDS16641.1	1	1809	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000047909	Ankrd16	ENSMUST00000156067	ENSMUSP00000115525	TRANSLATION	nonsense_mediated_decay	-	-	1	166	0	2.24	0	77.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047909	Ankrd16	ENSMUST00000142622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000145547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000056108	ENSMUSP00000052056	TRANSLATION	protein_coding	-	CCDS50502.1	5	361	0	5.71	2.9	221.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047909	Ankrd16	ENSMUST00000150320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000150213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000194100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000128774	ENSMUSP00000121218	TRANSLATION	nonsense_mediated_decay	start	-	3	76	0	0	0	31.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047909	Ankrd16	ENSMUST00000130186	ENSMUSP00000141685	TRANSLATION	protein_coding	stop	-	3	90	0	0.64	0	45.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047909	Ankrd16	ENSMUST00000125024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000148498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047909	Ankrd16	ENSMUST00000133664	ENSMUSP00000115226	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	1.3	0	42.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000108919	Olfr1295	ENSMUST00000217772	ENSMUSP00000151314	TRANSLATION	protein_coding	-	CCDS16529.1	5	312	0	0.36	3.9	166	6	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000108919	Olfr1295	ENSMUST00000207283	ENSMUSP00000146618	TRANSLATION	protein_coding	-	CCDS16529.1	2	312	0	0.36	3.9	166	6	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000108919	Olfr1295	ENSMUST00000207786	ENSMUSP00000147073	TRANSLATION	protein_coding	-	CCDS16529.1	-	312	0	0.36	3.9	166	6	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000033080	Vsx1	ENSMUST00000046095	ENSMUSP00000039088	TRANSLATION	protein_coding	-	CCDS16860.1	1	363	0	2.05	0.5	81.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000016995	Matn4	ENSMUST00000103104	ENSMUSP00000099393	TRANSLATION	protein_coding	-	CCDS17034.1	1	624	10	6	4	437.1	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000016995	Matn4	ENSMUST00000154940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016995	Matn4	ENSMUST00000109359	ENSMUSP00000104983	TRANSLATION	protein_coding	-	-	5	583	10	5	0	398.3	0	2,-2	-	-	13.674	MINOR
ENSMUSG00000016995	Matn4	ENSMUST00000103103	ENSMUSP00000099392	TRANSLATION	protein_coding	-	CCDS17034.1	1	624	10	6	4	437.1	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000016995	Matn4	ENSMUST00000109358	ENSMUSP00000104982	TRANSLATION	protein_coding	-	-	5	542	10	4	0	360.3	0	2,-2	-	-	9.39	MINOR
ENSMUSG00000075304	Sp5	ENSMUST00000100043	ENSMUSP00000097620	TRANSLATION	protein_coding	-	CCDS16106.1	1	398	12	0.2	7.5	72.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000070529	Wfdc10	ENSMUST00000094344	ENSMUSP00000091904	TRANSLATION	protein_coding	-	CCDS17049.1	1	124	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000027186	Elf5	ENSMUST00000123793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027186	Elf5	ENSMUST00000164172	ENSMUSP00000126941	TRANSLATION	protein_coding	-	CCDS16477.1	1	253	0	3.83	9.6	201.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027186	Elf5	ENSMUST00000028609	ENSMUSP00000028609	TRANSLATION	protein_coding	-	CCDS16477.1	1	253	0	3.83	9.6	201.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027186	Elf5	ENSMUST00000126290	ENSMUSP00000118565	TRANSLATION	protein_coding	stop	-	3	198	0	2.08	0	126.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027186	Elf5	ENSMUST00000152055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027186	Elf5	ENSMUST00000239273	ENSMUSP00000159212	TRANSLATION	protein_coding	-	-	-	272	0	3.83	1.2	201.5	0	-4,-5	-	-	12.069	MINOR
ENSMUSG00000027186	Elf5	ENSMUST00000137973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027186	Elf5	ENSMUST00000171693	ENSMUSP00000131940	TRANSLATION	protein_coding	-	CCDS16477.1	5	253	0	3.83	9.6	201.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027620	Rbm39	ENSMUST00000140001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027620	Rbm39	ENSMUST00000154677	ENSMUSP00000121603	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000109587	ENSMUSP00000105216	TRANSLATION	protein_coding	-	CCDS16964.1	1	530	0	8.55	7.5	221.5	0	-4,-5	-	-	14.06	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000137566	ENSMUSP00000119054	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000029149	ENSMUSP00000029149	TRANSLATION	protein_coding	-	CCDS71168.1	1	524	0	8.55	12.8	223.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027620	Rbm39	ENSMUST00000137297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000135274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000132929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000142071	ENSMUSP00000116820	TRANSLATION	nonsense_mediated_decay	-	-	5	415	0	5.05	0	182.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000138381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000155837	ENSMUSP00000119541	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000147098	ENSMUSP00000120597	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000109584	ENSMUSP00000105213	TRANSLATION	protein_coding	-	-	5	38	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000137340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000146288	ENSMUSP00000114824	TRANSLATION	protein_coding	stop	-	5	156	0	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000148794	ENSMUSP00000117462	TRANSLATION	protein_coding	start/stop	-	5	311	0	5.75	0	137.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000126992	ENSMUSP00000116950	TRANSLATION	protein_coding	stop	-	5	273	0	3.3	0	42.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000128243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000153514	ENSMUSP00000119204	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000150272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027620	Rbm39	ENSMUST00000130516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027620	Rbm39	ENSMUST00000131625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027620	Rbm39	ENSMUST00000146549	ENSMUSP00000115488	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027620	Rbm39	ENSMUST00000146297	ENSMUSP00000119298	TRANSLATION	protein_coding	-	CCDS71168.1	1	524	0	8.55	12.8	223.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027620	Rbm39	ENSMUST00000152919	ENSMUSP00000124018	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038605	Samd10	ENSMUST00000060173	ENSMUSP00000060499	TRANSLATION	protein_coding	-	CCDS17217.1	1	202	0	1.24	8.8	68.8	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000038605	Samd10	ENSMUST00000136249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038605	Samd10	ENSMUST00000183836	ENSMUSP00000139114	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027602	Map1lc3a	ENSMUST00000145086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027602	Map1lc3a	ENSMUST00000154596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027602	Map1lc3a	ENSMUST00000029128	ENSMUSP00000029128	TRANSLATION	protein_coding	-	CCDS16945.1	1	121	0	3	21.5	148.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000070530	Wfdc16	ENSMUST00000109336	ENSMUSP00000104960	TRANSLATION	protein_coding	-	CCDS50795.1	1	111	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000014361	Mertk	ENSMUST00000140221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014361	Mertk	ENSMUST00000014505	ENSMUSP00000014505	TRANSLATION	protein_coding	-	CCDS16716.1	1	994	20	7.15	0.5	396.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000016255	Tubb1	ENSMUST00000016399	ENSMUSP00000016399	TRANSLATION	protein_coding	-	CCDS38359.1	1	451	19	3.5	3.7	375.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000101645	Gm28635	ENSMUST00000189772	ENSMUSP00000141166	TRANSLATION	protein_coding,RT	-	CCDS16186.1	5	938	0	10.8132	8.8	82.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000109813	Olfr1279	ENSMUST00000216697	ENSMUSP00000149972	TRANSLATION	protein_coding	-	-	5	311	0	0.3	6.4	150.8	7	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000109813	Olfr1279	ENSMUST00000090329	ENSMUSP00000087801	TRANSLATION	protein_coding	-	CCDS16519.1	-	313	0	0.3	6.4	150.8	7	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000109813	Olfr1279	ENSMUST00000213823	ENSMUSP00000150799	TRANSLATION	protein_coding	-	-	5	311	0	0.3	6.4	150.8	7	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000075307	Klhl41	ENSMUST00000100050	ENSMUSP00000097627	TRANSLATION	protein_coding	-	CCDS38136.1	1	606	0	5.6	14.8	316	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050128	Olfr1023	ENSMUST00000056408	ENSMUSP00000059849	TRANSLATION	protein_coding	-	CCDS16226.1	-	311	0	0.36	4	174.5	6	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000050128	Olfr1023	ENSMUST00000213441	ENSMUSP00000149138	TRANSLATION	protein_coding	-	CCDS16226.1	5	311	0	0.36	4	174.5	6	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000058318	Phf21a	ENSMUST00000090586	ENSMUSP00000088074	TRANSLATION	protein_coding	-	CCDS50644.1	1	688	8	2.413	0.5	47.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000138995	ENSMUSP00000125734	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000111291	ENSMUSP00000106922	TRANSLATION	protein_coding	-	CCDS50645.1	1	604	8	2.413	0.5	47.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000162146	ENSMUSP00000124032	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000162497	ENSMUSP00000124224	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000161044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058318	Phf21a	ENSMUST00000128781	ENSMUSP00000125228	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000111297	ENSMUSP00000106928	TRANSLATION	protein_coding	-	-	5	611	8	2.3494	0	47.8	0	-4,-5	-	-	17.844	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000162188	ENSMUSP00000125628	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000068702	ENSMUSP00000070649	TRANSLATION	protein_coding	-	CCDS16442.1	5	556	8	2.314	0.5	47.8	0	-4,-5	-	-	17.754	PRINCIPAL:3
ENSMUSG00000058318	Phf21a	ENSMUST00000159961	ENSMUSP00000123955	TRANSLATION	protein_coding	start	-	5	575	8	2.413	0	47.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000160235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058318	Phf21a	ENSMUST00000142528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058318	Phf21a	ENSMUST00000159366	ENSMUSP00000124238	TRANSLATION	protein_coding	start/stop	-	2	189	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000111292	ENSMUSP00000106923	TRANSLATION	protein_coding	-	CCDS16442.1	1	556	8	2.314	0.5	47.8	0	-4,-5	-	-	17.754	PRINCIPAL:3
ENSMUSG00000058318	Phf21a	ENSMUST00000159727	ENSMUSP00000124845	TRANSLATION	protein_coding	start/stop	-	1	185	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000044036	ENSMUSP00000038497	TRANSLATION	protein_coding	-	CCDS50645.1	5	604	8	2.413	0.5	47.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000111293	ENSMUSP00000106924	TRANSLATION	protein_coding	-	CCDS50644.1	5	688	8	2.413	0.5	47.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000161067	ENSMUSP00000124255	TRANSLATION	protein_coding	start/stop	-	3	231	8	2.1556	0	47.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058318	Phf21a	ENSMUST00000111290	ENSMUSP00000106921	TRANSLATION	protein_coding	-	-	5	659	8	2.2834	0	47.8	0	-4,-5	-	-	17.676	ALTERNATIVE:2
ENSMUSG00000058318	Phf21a	ENSMUST00000111294	ENSMUSP00000106925	TRANSLATION	protein_coding	-	CCDS84556.1	5	641	8	2.314	0.5	47.8	0	-4,-5	-	-	17.754	ALTERNATIVE:2
ENSMUSG00000026880	Stom	ENSMUST00000202568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026880	Stom	ENSMUST00000028241	ENSMUSP00000028241	TRANSLATION	protein_coding	-	CCDS15961.1	1	284	0	3.55	1.5	119.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053916	Nanp	ENSMUST00000140124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053916	Nanp	ENSMUST00000066640	ENSMUSP00000063895	TRANSLATION	protein_coding	-	CCDS16864.1	1	248	9	2	6.3	53.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000055371	Stam2	ENSMUST00000155516	ENSMUSP00000119203	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055371	Stam2	ENSMUST00000102759	ENSMUSP00000099820	TRANSLATION	protein_coding	-	CCDS16037.1	1	523	0	9.55	3.9	229.9	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000055371	Stam2	ENSMUST00000138290	ENSMUSP00000114620	TRANSLATION	protein_coding	stop	-	5	65	0	2	0	79.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055371	Stam2	ENSMUST00000127316	ENSMUSP00000121898	TRANSLATION	protein_coding	-	-	1	415	0	8.8	0	148.5	0	-4,-5	-	-	5.616	MINOR
ENSMUSG00000055371	Stam2	ENSMUST00000150582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068882	Ssb	ENSMUST00000132603	ENSMUSP00000115666	TRANSLATION	protein_coding	start	-	5	230	0	2.83	0	104.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068882	Ssb	ENSMUST00000090852	ENSMUSP00000088365	TRANSLATION	protein_coding	-	CCDS16101.1	1	415	0	7.58	1.5	223.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068882	Ssb	ENSMUST00000112260	ENSMUSP00000107879	TRANSLATION	protein_coding	stop	-	3	184	0	4.75	0	119.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068882	Ssb	ENSMUST00000166411	ENSMUSP00000130313	TRANSLATION	protein_coding	-	CCDS16101.1	5	415	0	7.58	1.5	223.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068882	Ssb	ENSMUST00000156057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068882	Ssb	ENSMUST00000132186	ENSMUSP00000119773	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	3.816	0	101.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078880	Gm14308	ENSMUST00000108990	ENSMUSP00000104618	TRANSLATION	protein_coding	-	CCDS50830.1	2	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078880	Gm14308	ENSMUST00000119149	ENSMUSP00000113990	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078880	Gm14308	ENSMUST00000126807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078880	Gm14308	ENSMUST00000117267	ENSMUSP00000112702	TRANSLATION	protein_coding	-	-	3	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000027086	Fastkd1	ENSMUST00000102706	ENSMUSP00000099767	TRANSLATION	protein_coding	-	-	5	800	0	0	0	219.7	0	-2,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000027086	Fastkd1	ENSMUST00000129260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027086	Fastkd1	ENSMUST00000073152	ENSMUSP00000072896	TRANSLATION	protein_coding	-	CCDS16096.1	1	829	0	0	1.5	219.7	0	-2,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000027086	Fastkd1	ENSMUST00000140776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014355	Anapc1	ENSMUST00000110333	ENSMUSP00000105962	TRANSLATION	protein_coding	-	-	1	1213	0	24.25	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014355	Anapc1	ENSMUST00000143007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000151171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000124418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000110332	ENSMUSP00000105961	TRANSLATION	protein_coding	-	-	1	80	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014355	Anapc1	ENSMUST00000014499	ENSMUSP00000014499	TRANSLATION	protein_coding	-	CCDS16715.1	1	1944	0	41.75	7.5	21.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000014355	Anapc1	ENSMUST00000145906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000154320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000134485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000154995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014355	Anapc1	ENSMUST00000123503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026753	Ppp6c	ENSMUST00000204701	ENSMUSP00000145157	TRANSLATION	protein_coding	-	-	5	283	10	5.68	2.4	98.8	0	-4,-5	-	-	15.208	MINOR
ENSMUSG00000026753	Ppp6c	ENSMUST00000204368	ENSMUSP00000145393	TRANSLATION	protein_coding	stop	-	5	83	5	2.08	0	51.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026753	Ppp6c	ENSMUST00000204257	ENSMUSP00000145064	TRANSLATION	nonsense_mediated_decay	-	-	5	81	3	1.735	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026753	Ppp6c	ENSMUST00000143733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026753	Ppp6c	ENSMUST00000028087	ENSMUSP00000028087	TRANSLATION	protein_coding	-	CCDS16017.1	1	305	10	6.43	17.5	126	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047356	Lcn10	ENSMUST00000058912	ENSMUSP00000059353	TRANSLATION	protein_coding	-	CCDS15787.1	1	182	0	2.716	1.5	27.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027286	Lrrc57	ENSMUST00000102498	ENSMUSP00000099556	TRANSLATION	protein_coding	-	CCDS16623.1	5	239	2	4.548	16.8	98.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027286	Lrrc57	ENSMUST00000102497	ENSMUSP00000099555	TRANSLATION	protein_coding	-	CCDS16623.1	1	239	2	4.548	16.8	98.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027286	Lrrc57	ENSMUST00000133612	ENSMUSP00000121638	TRANSLATION	protein_coding	stop	-	1	218	2	4.05	0	98.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027286	Lrrc57	ENSMUST00000102496	ENSMUSP00000099554	TRANSLATION	protein_coding	-	CCDS16623.1	1	239	2	4.548	16.8	98.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027286	Lrrc57	ENSMUST00000102499	ENSMUSP00000099557	TRANSLATION	protein_coding	-	CCDS16623.1	1	239	2	4.548	16.8	98.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027286	Lrrc57	ENSMUST00000135465	ENSMUSP00000117895	TRANSLATION	protein_coding	start	-	3	124	0	1.798	0	56.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027286	Lrrc57	ENSMUST00000141932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027611	Procr	ENSMUST00000132608	ENSMUSP00000114567	TRANSLATION	protein_coding	stop	-	3	138	0	1.75	0	41.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000027611	Procr	ENSMUST00000143493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027611	Procr	ENSMUST00000029140	ENSMUSP00000029140	TRANSLATION	protein_coding	-	CCDS16954.1	1	242	0	3.35	1.5	77.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027611	Procr	ENSMUST00000155095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026928	Card9	ENSMUST00000028294	ENSMUSP00000028294	TRANSLATION	protein_coding	-	CCDS38084.1	5	536	0	1.8	2.7	68.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026928	Card9	ENSMUST00000153370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026928	Card9	ENSMUST00000100303	ENSMUSP00000097876	TRANSLATION	protein_coding	-	CCDS38084.1	1	536	0	1.8	2.7	68.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000111711	Olfr1089	ENSMUST00000214317	ENSMUSP00000149509	TRANSLATION	protein_coding	-	CCDS16266.1	-	311	0	0.2	7.5	157.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000042845	Wfdc12	ENSMUST00000051272	ENSMUSP00000050836	TRANSLATION	protein_coding	-	CCDS38318.1	1	85	0	0	0.5	29.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000036249	Rbm43	ENSMUST00000126090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036249	Rbm43	ENSMUST00000132703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036249	Rbm43	ENSMUST00000102767	ENSMUSP00000099828	TRANSLATION	protein_coding	-	CCDS16030.1	1	343	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000036249	Rbm43	ENSMUST00000152800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036249	Rbm43	ENSMUST00000165313	ENSMUSP00000126129	TRANSLATION	protein_coding	-	CCDS16030.1	3	343	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000036249	Rbm43	ENSMUST00000102768	ENSMUSP00000099829	TRANSLATION	protein_coding	-	CCDS16030.1	5	343	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000067704	Wfdc13	ENSMUST00000088260	ENSMUSP00000085594	TRANSLATION	protein_coding	-	CCDS38327.1	1	81	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000078972	Gm15557	ENSMUST00000109629	ENSMUSP00000105257	TRANSLATION	protein_coding	-	-	5	234	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000075125	Olfr1181	ENSMUST00000213190	ENSMUSP00000150939	TRANSLATION	protein_coding	-	CCDS16335.1	5	311	0	0	2.7	164	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000075125	Olfr1181	ENSMUST00000102619	ENSMUSP00000099679	TRANSLATION	protein_coding	-	CCDS16335.1	3	311	0	0	2.7	164	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000075125	Olfr1181	ENSMUST00000099823	ENSMUSP00000097411	TRANSLATION	protein_coding	-	CCDS16335.1	-	311	0	0	2.7	164	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079056	Kcnip3	ENSMUST00000088538	ENSMUSP00000085896	TRANSLATION	protein_coding	-	CCDS50703.1	1	230	17	6.75	17.5	89.7	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000079056	Kcnip3	ENSMUST00000137625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079056	Kcnip3	ENSMUST00000103215	ENSMUSP00000099504	TRANSLATION	protein_coding	-	CCDS16703.1	1	256	17	6.75	6.3	89.7	0	-4,-6	-	-	19.284	MINOR
ENSMUSG00000079056	Kcnip3	ENSMUST00000028850	ENSMUSP00000028850	TRANSLATION	protein_coding	-	CCDS71139.1	1	284	17	5.75	0.5	89.7	0	-4,-2	-	-	16.002	MINOR
ENSMUSG00000027597	Ahcy	ENSMUST00000146367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027597	Ahcy	ENSMUST00000137242	ENSMUSP00000116774	TRANSLATION	protein_coding	stop	-	3	95	5	2.16	0	131.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027597	Ahcy	ENSMUST00000054607	ENSMUSP00000061851	TRANSLATION	protein_coding	-	CCDS16942.1	1	432	44	9.41	18.3	528.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000027469	Tpx2	ENSMUST00000178997	ENSMUSP00000136457	TRANSLATION	protein_coding	-	CCDS16900.1	1	745	0	2.68	1.5	281.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027469	Tpx2	ENSMUST00000143740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027469	Tpx2	ENSMUST00000109816	ENSMUSP00000105441	TRANSLATION	protein_coding	-	CCDS16900.1	1	745	0	2.68	1.5	281.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027469	Tpx2	ENSMUST00000136407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027469	Tpx2	ENSMUST00000144848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027469	Tpx2	ENSMUST00000164120	ENSMUSP00000128888	TRANSLATION	protein_coding	-	CCDS16900.1	5	745	0	2.68	1.5	281.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027469	Tpx2	ENSMUST00000028969	ENSMUSP00000028969	TRANSLATION	protein_coding	-	CCDS16900.1	1	745	0	2.68	1.5	281.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035033	Tbr1	ENSMUST00000102737	ENSMUSP00000099798	TRANSLATION	protein_coding	-	-	2	418	0	2.75	0	453.7	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000035033	Tbr1	ENSMUST00000136867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035033	Tbr1	ENSMUST00000048934	ENSMUSP00000046787	TRANSLATION	protein_coding	-	CCDS16063.1	1	681	0	3.75	10.8	557	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035033	Tbr1	ENSMUST00000131538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059742	Kcnh7	ENSMUST00000131799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059742	Kcnh7	ENSMUST00000112454	ENSMUSP00000108073	TRANSLATION	protein_coding	-	-	1	522	0	3.25	0	117.5	1	-4,-2	-	-	0	MINOR
ENSMUSG00000059742	Kcnh7	ENSMUST00000112452	ENSMUSP00000108071	TRANSLATION	protein_coding	-	-	1	515	0	3.25	0	117.5	1	-4,-2	-	-	0	MINOR
ENSMUSG00000059742	Kcnh7	ENSMUST00000075052	ENSMUSP00000074563	TRANSLATION	protein_coding	-	CCDS38128.1	1	1195	0	6.995	2.7	241	4	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000075127	Olfr1179	ENSMUST00000099825	ENSMUSP00000097413	TRANSLATION	protein_coding	-	CCDS16333.1	-	307	0	0.2	2.7	159.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075127	Olfr1179	ENSMUST00000213157	ENSMUSP00000151174	TRANSLATION	protein_coding	-	CCDS16333.1	5	307	0	0.2	2.7	159.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057234	Mettl15	ENSMUST00000145535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057234	Mettl15	ENSMUST00000147770	ENSMUSP00000116829	TRANSLATION	protein_coding	stop	-	3	230	19	2.8	0	28	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057234	Mettl15	ENSMUST00000147376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057234	Mettl15	ENSMUST00000138533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057234	Mettl15	ENSMUST00000081631	ENSMUSP00000080337	TRANSLATION	protein_coding	-	CCDS16506.1	1	406	20	3.95	1.5	28	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000037938	Chchd5	ENSMUST00000035481	ENSMUSP00000044253	TRANSLATION	protein_coding	-	CCDS16721.1	1	110	0	2.33	7.5	58.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037938	Chchd5	ENSMUST00000149118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037938	Chchd5	ENSMUST00000137881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027485	Bpifb1	ENSMUST00000081816	ENSMUSP00000080501	TRANSLATION	protein_coding	-	CCDS16927.1	1	474	0	1.96	1.5	116.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027485	Bpifb1	ENSMUST00000123017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027485	Bpifb1	ENSMUST00000028987	ENSMUSP00000028987	TRANSLATION	protein_coding	-	CCDS16927.1	1	474	0	1.96	1.5	116.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026767	Mindy3	ENSMUST00000195758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000129348	ENSMUSP00000121265	TRANSLATION	protein_coding	start/stop	-	5	160	0	0	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000154899	ENSMUSP00000121476	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	35.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000194533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026767	Mindy3	ENSMUST00000155530	ENSMUSP00000116939	TRANSLATION	nonsense_mediated_decay	-	-	1	135	0	0	0	46.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000135397	ENSMUSP00000114789	TRANSLATION	nonsense_mediated_decay	start	-	5	64	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000129489	ENSMUSP00000122501	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	0	0	35.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000195084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026767	Mindy3	ENSMUST00000144645	ENSMUSP00000116836	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	0	0	37	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000137082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000154952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026767	Mindy3	ENSMUST00000130097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000130225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000124515	ENSMUSP00000120193	TRANSLATION	protein_coding	stop	-	5	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000153690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000195125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026767	Mindy3	ENSMUST00000129993	ENSMUSP00000141479	TRANSLATION	protein_coding	stop	-	5	86	0	0	0	61.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000028105	ENSMUSP00000028105	TRANSLATION	protein_coding	-	CCDS15690.1	1	444	3	1.35	9.6	176.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026767	Mindy3	ENSMUST00000124603	ENSMUSP00000117457	TRANSLATION	protein_coding	stop	-	5	230	3	1.35	0	94.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026767	Mindy3	ENSMUST00000151529	ENSMUSP00000122798	TRANSLATION	nonsense_mediated_decay	start	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074966	Olfr1275	ENSMUST00000217539	ENSMUSP00000150515	TRANSLATION	protein_coding	-	CCDS16515.1	5	312	0	0.36	5.1	125.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074966	Olfr1275	ENSMUST00000099620	ENSMUSP00000097215	TRANSLATION	protein_coding	-	CCDS16515.1	-	312	0	0.36	5.1	125.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074966	Olfr1275	ENSMUST00000216421	ENSMUSP00000149730	TRANSLATION	protein_coding	-	CCDS16515.1	5	312	0	0.36	5.1	125.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000026668	Ucma	ENSMUST00000167607	ENSMUSP00000126371	TRANSLATION	protein_coding	-	CCDS50490.1	1	105	0	0	0.5	96.6	0	3,-2	-	-	0	MINOR
ENSMUSG00000026668	Ucma	ENSMUST00000115010	ENSMUSP00000110662	TRANSLATION	protein_coding	-	CCDS50489.1	1	138	0	0	8.7	233.8	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000026668	Ucma	ENSMUST00000195688	ENSMUSP00000141304	TRANSLATION	protein_coding	-	CCDS84467.1	1	83	0	0	0.5	50.8	0	1,-3	-	-	0	MINOR
ENSMUSG00000026668	Ucma	ENSMUST00000027978	ENSMUSP00000027978	TRANSLATION	protein_coding	-	CCDS15661.1	1	116	0	0	0.5	178.5	0	1,-3	-	-	2.682	MINOR
ENSMUSG00000026668	Ucma	ENSMUST00000127282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027475	Kif3b	ENSMUST00000028977	ENSMUSP00000028977	TRANSLATION	protein_coding	-	CCDS16911.1	1	747	11	1	6.3	408.3	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000075091	Olfr1233	ENSMUST00000216561	ENSMUSP00000149446	TRANSLATION	protein_coding	-	CCDS16376.1	5	305	0	0.32	0.5	158	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075091	Olfr1233	ENSMUST00000099784	ENSMUSP00000097372	TRANSLATION	protein_coding	-	CCDS16376.1	-	305	0	0.32	0.5	158	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075091	Olfr1233	ENSMUST00000215469	ENSMUSP00000149322	TRANSLATION	protein_coding	-	CCDS16376.1	5	305	0	0.32	0.5	158	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075091	Olfr1233	ENSMUST00000215018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075084	Olfr1243	ENSMUST00000144885	ENSMUSP00000149464	TRANSLATION	protein_coding	-	CCDS16383.1	3	305	0	0.32	2.7	153	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075084	Olfr1243	ENSMUST00000099775	ENSMUSP00000097363	TRANSLATION	protein_coding	-	CCDS16383.1	-	305	0	0.32	2.7	153	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075084	Olfr1243	ENSMUST00000216635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026754	Golga1	ENSMUST00000124463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026754	Golga1	ENSMUST00000039165	ENSMUSP00000037735	TRANSLATION	protein_coding	-	CCDS16016.1	1	758	0	0	1.5	58.3	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000026754	Golga1	ENSMUST00000204127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026754	Golga1	ENSMUST00000154210	ENSMUSP00000145051	TRANSLATION	nonsense_mediated_decay	start	-	3	82	0	0	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026754	Golga1	ENSMUST00000112850	ENSMUSP00000108471	TRANSLATION	protein_coding	-	CCDS71049.1	1	733	0	0	0.5	58.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000026754	Golga1	ENSMUST00000126520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026754	Golga1	ENSMUST00000153914	ENSMUSP00000145253	TRANSLATION	nonsense_mediated_decay	start	-	1	168	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026754	Golga1	ENSMUST00000184996	ENSMUSP00000139001	TRANSLATION	nonsense_mediated_decay	-	-	1	758	0	0	1.5	58.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026754	Golga1	ENSMUST00000149810	ENSMUSP00000145206	TRANSLATION	protein_coding	start/stop	-	5	186	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026754	Golga1	ENSMUST00000149842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026754	Golga1	ENSMUST00000136261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027639	Samhd1	ENSMUST00000109549	ENSMUSP00000105176	TRANSLATION	protein_coding	-	-	1	582	12	12.65	0	121.7	0	-4,-7	-	-	14.802	MINOR
ENSMUSG00000027639	Samhd1	ENSMUST00000142508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027639	Samhd1	ENSMUST00000139149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027639	Samhd1	ENSMUST00000149313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027639	Samhd1	ENSMUST00000160213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027639	Samhd1	ENSMUST00000139263	ENSMUSP00000124935	TRANSLATION	protein_coding	start	-	1	631	12	13.65	0	121.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027639	Samhd1	ENSMUST00000057725	ENSMUSP00000059717	TRANSLATION	protein_coding	-	CCDS16973.2	1	658	12	14.25	0.5	121.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027639	Samhd1	ENSMUST00000088523	ENSMUSP00000085880	TRANSLATION	protein_coding	-	CCDS50783.1	5	651	12	13.65	0.5	121.7	0	-4,-7	-	-	16.8	MINOR
ENSMUSG00000027639	Samhd1	ENSMUST00000123932	ENSMUSP00000124599	TRANSLATION	nonsense_mediated_decay	-	-	2	150	0	1.75	0	41.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027639	Samhd1	ENSMUST00000152866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045822	Zswim3	ENSMUST00000052107	ENSMUSP00000050970	TRANSLATION	protein_coding	-	CCDS17058.1	1	695	0	0	1.5	28.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111051	ENSMUSP00000106680	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000176893	ENSMUSP00000135762	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111042	ENSMUSP00000106671	TRANSLATION	protein_coding	-	-	1	289	0	1	0	162.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000048482	Bdnf	ENSMUST00000111044	ENSMUSP00000106673	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111049	ENSMUSP00000106678	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111047	ENSMUSP00000106676	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111043	ENSMUSP00000106672	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111050	ENSMUSP00000106679	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000111046	ENSMUSP00000106675	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000048482	Bdnf	ENSMUST00000053317	ENSMUSP00000057989	TRANSLATION	protein_coding	-	CCDS38193.1	1	257	0	1	13.6	162.5	0	1,-4	-	-	15.652	PRINCIPAL:4
ENSMUSG00000048482	Bdnf	ENSMUST00000111045	ENSMUSP00000106674	TRANSLATION	protein_coding	-	CCDS38194.1	1	249	0	1	14.8	162.5	0	3,-3	-	-	16	ALTERNATIVE:1
ENSMUSG00000109801	Olfr1316	ENSMUST00000213696	ENSMUSP00000149103	TRANSLATION	protein_coding	-	-	5	312	0	0.3	7.6	139.2	6	-3,-4	-	-	15	ALTERNATIVE:1
ENSMUSG00000109801	Olfr1316	ENSMUST00000099596	ENSMUSP00000097191	TRANSLATION	protein_coding	-	CCDS16545.1	-	314	0	0.3	7.6	139.2	6	-3,-4	-	-	15	PRINCIPAL:2
ENSMUSG00000074593	Spint5	ENSMUST00000180193	ENSMUSP00000135911	TRANSLATION	protein_coding	-	-	5	105	0	1	0.5	59.3	0	2,-1	-	-	10.836	MINOR
ENSMUSG00000074593	Spint5	ENSMUST00000103097	ENSMUSP00000099386	TRANSLATION	protein_coding	-	CCDS17052.1	1	105	0	1.24	0.5	59.3	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026825	Dnm1	ENSMUST00000201440	ENSMUSP00000144309	TRANSLATION	nonsense_mediated_decay	start	-	5	110	0	1.32	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000139238	ENSMUSP00000118855	TRANSLATION	nonsense_mediated_decay	-	-	3	59	7	1	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000078352	ENSMUSP00000077461	TRANSLATION	protein_coding	-	CCDS79772.1	1	851	18	19.41	6.4	698.6	0	-4,-6	-	-	18.752	PRINCIPAL:2
ENSMUSG00000026825	Dnm1	ENSMUST00000113365	ENSMUSP00000108992	TRANSLATION	protein_coding	-	-	5	864	18	19.66	5.3	702.7	0	-4,-6	-	-	19.094	ALTERNATIVE:1
ENSMUSG00000026825	Dnm1	ENSMUST00000155269	ENSMUSP00000116054	TRANSLATION	protein_coding	start	-	5	159	0	3.41	0	40.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000139624	ENSMUSP00000122679	TRANSLATION	nonsense_mediated_decay	-	-	1	867	18	19.16	0.5	702.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000145885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026825	Dnm1	ENSMUST00000091089	ENSMUSP00000088618	TRANSLATION	protein_coding	-	CCDS38102.1	1	864	18	19.31	4.1	702.7	0	-4,-6	-	-	17.948	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000113352	ENSMUSP00000108979	TRANSLATION	protein_coding	-	-	2	851	18	19.16	6.4	702.7	0	-4,-6	-	-	18.5	ALTERNATIVE:1
ENSMUSG00000026825	Dnm1	ENSMUST00000202578	ENSMUSP00000143955	TRANSLATION	protein_coding	-	CCDS79772.1	5	851	18	19.41	6.4	698.6	0	-4,-6	-	-	18.752	PRINCIPAL:2
ENSMUSG00000026825	Dnm1	ENSMUST00000139291	ENSMUSP00000115523	TRANSLATION	protein_coding	start	-	3	149	0	3.08	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000201433	ENSMUSP00000144264	TRANSLATION	protein_coding	-	-	5	864	18	19.91	5.3	698.6	0	-4,-6	-	-	19.346	ALTERNATIVE:1
ENSMUSG00000026825	Dnm1	ENSMUST00000129156	ENSMUSP00000118914	TRANSLATION	nonsense_mediated_decay	start	-	5	283	0	5.4	0	139.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026825	Dnm1	ENSMUST00000156866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026825	Dnm1	ENSMUST00000113350	ENSMUSP00000108977	TRANSLATION	protein_coding	-	-	5	851	18	19.16	6.4	702.7	0	-4,-6	-	-	18.5	ALTERNATIVE:1
ENSMUSG00000026825	Dnm1	ENSMUST00000141633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026825	Dnm1	ENSMUST00000201494	ENSMUSP00000144145	TRANSLATION	protein_coding	-	-	5	835	18	19.16	0	590.3	0	-4,-6	-	-	10.5	MINOR
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000111231	ENSMUSP00000106862	TRANSLATION	protein_coding	-	CCDS16461.1	1	244	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000090513	ENSMUSP00000087999	TRANSLATION	protein_coding	-	CCDS16461.1	1	244	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000177007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000136601	ENSMUSP00000134813	TRANSLATION	protein_coding	start	-	5	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000099682	ENSMUSP00000097274	TRANSLATION	protein_coding	-	-	5	216	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000160722	ENSMUSP00000124783	TRANSLATION	protein_coding	-	CCDS16461.1	1	244	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000177152	ENSMUSP00000135478	TRANSLATION	protein_coding	start	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000177171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000128898	ENSMUSP00000114251	TRANSLATION	protein_coding	stop	-	5	182	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000132640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000138903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027165	B230118H07Rik	ENSMUST00000160037	ENSMUSP00000123987	TRANSLATION	protein_coding	-	CCDS16461.1	1	244	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000027340	Slc23a2	ENSMUST00000154009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027340	Slc23a2	ENSMUST00000127724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027340	Slc23a2	ENSMUST00000133407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027340	Slc23a2	ENSMUST00000028815	ENSMUSP00000028815	TRANSLATION	protein_coding	-	CCDS16769.1	1	648	0	4.855	8.8	303.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027340	Slc23a2	ENSMUST00000148749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027340	Slc23a2	ENSMUST00000137910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027340	Slc23a2	ENSMUST00000128899	ENSMUSP00000116640	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026820	Ptges2	ENSMUST00000028162	ENSMUSP00000028162	TRANSLATION	protein_coding	-	CCDS15914.1	1	384	26	6.2	1.5	41	0	0,1	-	-	18	PRINCIPAL:1
ENSMUSG00000026820	Ptges2	ENSMUST00000123714	ENSMUSP00000141638	TRANSLATION	nonsense_mediated_decay	start	-	2	54	0	0.2	0	0	0	2,3	-	-	-1	MINOR
ENSMUSG00000026820	Ptges2	ENSMUST00000130121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026750	Psmb7	ENSMUST00000151981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026750	Psmb7	ENSMUST00000028083	ENSMUSP00000028083	TRANSLATION	protein_coding	-	CCDS16010.1	1	277	4	7.25	12.8	230.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000032852	Rspo4	ENSMUST00000042217	ENSMUSP00000041578	TRANSLATION	protein_coding	-	CCDS38272.1	1	228	0	2	1.5	152.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078420	Olfr141	ENSMUST00000216117	ENSMUSP00000150485	TRANSLATION	protein_coding	-	-	5	315	0	0	0.5	164.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027425	Kat14	ENSMUST00000148500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027425	Kat14	ENSMUST00000156410	ENSMUSP00000127214	TRANSLATION	nonsense_mediated_decay	start	-	3	97	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027425	Kat14	ENSMUST00000131836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027425	Kat14	ENSMUST00000171261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027425	Kat14	ENSMUST00000028911	ENSMUSP00000028911	TRANSLATION	protein_coding	-	CCDS16819.1	1	779	27	0	6.3	38.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027425	Kat14	ENSMUST00000147747	ENSMUSP00000130785	TRANSLATION	protein_coding	-	-	1	568	23	0	0	38.6	0	-4,-5	-	-	9.336	MINOR
ENSMUSG00000027425	Kat14	ENSMUST00000137611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027425	Kat14	ENSMUST00000139812	ENSMUSP00000128694	TRANSLATION	protein_coding	start	-	3	92	23	0	0	38.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027425	Kat14	ENSMUST00000125398	ENSMUSP00000129716	TRANSLATION	protein_coding	start	-	3	83	13	0	0	30.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027425	Kat14	ENSMUST00000130654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027425	Kat14	ENSMUST00000143318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096484	Gm13696	ENSMUST00000180347	ENSMUSP00000137022	TRANSLATION	protein_coding	-	-	-	830	0	3.83	0	130.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096484	Gm13696	ENSMUST00000179311	ENSMUSP00000136244	TRANSLATION	protein_coding	start	-	5	243	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000075112	Olfr1211	ENSMUST00000215205	ENSMUSP00000150571	TRANSLATION	protein_coding	-	CCDS16356.1	5	311	0	0.2	4	164.7	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075112	Olfr1211	ENSMUST00000099808	ENSMUSP00000097396	TRANSLATION	protein_coding	-	CCDS16356.1	-	311	0	0.2	4	164.7	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075112	Olfr1211	ENSMUST00000213412	ENSMUSP00000150336	TRANSLATION	protein_coding	-	CCDS16356.1	5	311	0	0.2	4	164.7	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075112	Olfr1211	ENSMUST00000141958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075425	Gm13547	ENSMUST00000177379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075425	Gm13547	ENSMUST00000113810	ENSMUSP00000109441	TRANSLATION	protein_coding	-	CCDS50553.1	1	163	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000075425	Gm13547	ENSMUST00000113809	ENSMUSP00000109440	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002546	Golga2	ENSMUST00000113377	ENSMUSP00000109004	TRANSLATION	protein_coding	-	CCDS38101.1	5	999	0	0	1.5	980	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000002546	Golga2	ENSMUST00000127276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002546	Golga2	ENSMUST00000081670	ENSMUSP00000080374	TRANSLATION	protein_coding	-	-	1	955	0	0	0	980	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002546	Golga2	ENSMUST00000126276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002546	Golga2	ENSMUST00000147707	ENSMUSP00000121886	TRANSLATION	protein_coding	start/stop	-	3	272	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002546	Golga2	ENSMUST00000100194	ENSMUSP00000097768	TRANSLATION	protein_coding	-	-	1	1014	0	0	0	980	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002546	Golga2	ENSMUST00000239447	ENSMUSP00000159316	TRANSLATION	protein_coding	-	-	-	987	0	0	0	980	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002546	Golga2	ENSMUST00000149141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002546	Golga2	ENSMUST00000146544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002546	Golga2	ENSMUST00000239474	ENSMUSP00000159347	TRANSLATION	protein_coding	-	CCDS38100.1	-	1026	0	0	1.5	980	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000002546	Golga2	ENSMUST00000139494	ENSMUSP00000117476	TRANSLATION	protein_coding	stop	-	5	200	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000002546	Golga2	ENSMUST00000131712	ENSMUSP00000114169	TRANSLATION	protein_coding	stop	-	5	331	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002546	Golga2	ENSMUST00000129193	ENSMUSP00000115003	TRANSLATION	protein_coding	start/stop	-	5	282	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075170	Olfr1097	ENSMUST00000217403	ENSMUSP00000150400	TRANSLATION	protein_coding	-	CCDS16271.1	5	315	0	0.32	2.7	172.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075170	Olfr1097	ENSMUST00000111576	ENSMUSP00000107202	TRANSLATION	protein_coding	-	CCDS16271.1	3	315	0	0.32	2.7	172.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070855	Olfr1116	ENSMUST00000090717	ENSMUSP00000132837	TRANSLATION	protein_coding	-	CCDS79817.1	-	307	0	0	1.5	174.2	6	-2,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000070855	Olfr1116	ENSMUST00000216364	ENSMUSP00000149674	TRANSLATION	protein_coding	-	-	5	328	0	0	0	174.2	6	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000046229	Scand1	ENSMUST00000079125	ENSMUSP00000105211	TRANSLATION	protein_coding	-	CCDS38298.1	1	142	0	0.6	1.5	89.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002458	Rgs19	ENSMUST00000144476	ENSMUSP00000120723	TRANSLATION	protein_coding	start	-	2	51	0	1.066	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002458	Rgs19	ENSMUST00000130712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002458	Rgs19	ENSMUST00000143510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002458	Rgs19	ENSMUST00000002532	ENSMUSP00000002532	TRANSLATION	protein_coding	-	CCDS17220.1	1	216	0	3	6.3	119.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000002458	Rgs19	ENSMUST00000108776	ENSMUSP00000104406	TRANSLATION	protein_coding	-	CCDS17220.1	1	216	0	3	6.3	119.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000002458	Rgs19	ENSMUST00000108769	ENSMUSP00000104400	TRANSLATION	protein_coding	-	-	2	160	0	2.132	0	61.3	0	-4,-5	-	-	6.78	MINOR
ENSMUSG00000002458	Rgs19	ENSMUST00000108772	ENSMUSP00000104403	TRANSLATION	protein_coding	-	CCDS71222.1	1	194	0	3	6.3	119.4	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000002458	Rgs19	ENSMUST00000108779	ENSMUSP00000104409	TRANSLATION	protein_coding	-	-	5	75	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000002458	Rgs19	ENSMUST00000124776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002458	Rgs19	ENSMUST00000165416	ENSMUSP00000129026	TRANSLATION	protein_coding	-	CCDS17220.1	1	216	0	3	6.3	119.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000002458	Rgs19	ENSMUST00000108771	ENSMUSP00000104402	TRANSLATION	protein_coding	-	CCDS71222.1	1	194	0	3	6.3	119.4	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000002458	Rgs19	ENSMUST00000108778	ENSMUSP00000104408	TRANSLATION	protein_coding	-	CCDS71223.1	1	243	0	3	0.5	119.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000050015	Olfr350	ENSMUST00000055130	ENSMUSP00000053105	TRANSLATION	protein_coding	-	CCDS15983.1	-	312	0	0.42	3.9	204.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000050015	Olfr350	ENSMUST00000214457	ENSMUSP00000150158	TRANSLATION	protein_coding	-	CCDS15983.1	5	312	0	0.42	3.9	204.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000050015	Olfr350	ENSMUST00000215100	ENSMUSP00000149667	TRANSLATION	protein_coding	-	CCDS15983.1	5	312	0	0.42	3.9	204.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000074594	Wfdc9	ENSMUST00000099095	ENSMUSP00000096693	TRANSLATION	protein_coding	-	CCDS50796.1	5	83	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000074594	Wfdc9	ENSMUST00000109335	ENSMUSP00000104959	TRANSLATION	protein_coding	-	CCDS50796.1	5	83	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000026645	Olah	ENSMUST00000194918	ENSMUSP00000141485	TRANSLATION	protein_coding	-	CCDS15647.1	1	265	3	6.08	1.5	172	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026645	Olah	ENSMUST00000115087	ENSMUSP00000110739	TRANSLATION	protein_coding	-	CCDS15647.1	1	265	3	6.08	1.5	172	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026645	Olah	ENSMUST00000027955	ENSMUSP00000027955	TRANSLATION	protein_coding	-	CCDS15647.1	1	265	3	6.08	1.5	172	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043727	F830045P16Rik	ENSMUST00000050309	ENSMUSP00000058047	TRANSLATION	protein_coding	-	CCDS16728.1	1	487	0	2.52	0.5	139.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002111	Spi1	ENSMUST00000002180	ENSMUSP00000002180	TRANSLATION	protein_coding	-	CCDS16425.1	1	272	0	1.3	7.5	80.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002111	Spi1	ENSMUST00000131400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002111	Spi1	ENSMUST00000169852	ENSMUSP00000130368	TRANSLATION	protein_coding	stop	-	3	143	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002111	Spi1	ENSMUST00000132741	ENSMUSP00000128457	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044039	Olfr1288	ENSMUST00000214816	ENSMUSP00000150331	TRANSLATION	protein_coding	-	CCDS38196.1	5	312	0	0.36	7.6	146.3	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044039	Olfr1288	ENSMUST00000104889	ENSMUSP00000100485	TRANSLATION	protein_coding	-	CCDS38196.1	-	312	0	0.36	7.6	146.3	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034032	Rpap1	ENSMUST00000136419	ENSMUSP00000138619	TRANSLATION	nonsense_mediated_decay	-	-	1	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034032	Rpap1	ENSMUST00000156506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034032	Rpap1	ENSMUST00000133146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034032	Rpap1	ENSMUST00000139311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034032	Rpap1	ENSMUST00000110793	ENSMUSP00000106420	TRANSLATION	protein_coding	-	CCDS16610.1	5	1409	0	0	0.5	149.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034032	Rpap1	ENSMUST00000141800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034032	Rpap1	ENSMUST00000048493	ENSMUSP00000037275	TRANSLATION	protein_coding	-	CCDS16610.1	1	1409	0	0	0.5	149.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034032	Rpap1	ENSMUST00000099529	ENSMUSP00000097127	TRANSLATION	protein_coding	-	CCDS16610.1	1	1409	0	0	0.5	149.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034032	Rpap1	ENSMUST00000184294	ENSMUSP00000138873	TRANSLATION	nonsense_mediated_decay	-	-	1	869	0	0	0	149.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041644	Slc5a12	ENSMUST00000146664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041644	Slc5a12	ENSMUST00000111026	ENSMUSP00000106655	TRANSLATION	protein_coding	-	CCDS50656.1	1	619	0	4.45	6.3	155.9	14	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000041644	Slc5a12	ENSMUST00000127822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041644	Slc5a12	ENSMUST00000045972	ENSMUSP00000047340	TRANSLATION	protein_coding	-	CCDS16512.1	1	623	0	4	0.5	139.3	13	-4,-5	-	-	10.104	MINOR
ENSMUSG00000041644	Slc5a12	ENSMUST00000138497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039449	Prpf18	ENSMUST00000035721	ENSMUSP00000041428	TRANSLATION	protein_coding	-	CCDS15657.1	1	342	0	3.625	14.8	261.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039449	Prpf18	ENSMUST00000140818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039449	Prpf18	ENSMUST00000192470	ENSMUSP00000141457	TRANSLATION	protein_coding	stop	-	5	73	0	1.33	0	54.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039449	Prpf18	ENSMUST00000153881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039449	Prpf18	ENSMUST00000144650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039449	Prpf18	ENSMUST00000152362	ENSMUSP00000116495	TRANSLATION	protein_coding	-	CCDS15657.1	1	342	0	3.625	14.8	261.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039844	Rapgef1	ENSMUST00000147488	ENSMUSP00000117631	TRANSLATION	protein_coding	start	-	1	643	0	6.885	0	220.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039844	Rapgef1	ENSMUST00000147755	ENSMUSP00000121615	TRANSLATION	protein_coding	-	-	1	1185	0	6.885	0.5	220.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039844	Rapgef1	ENSMUST00000137719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039844	Rapgef1	ENSMUST00000091146	ENSMUSP00000088680	TRANSLATION	protein_coding	-	CCDS38092.1	1	1218	0	6.885	0.5	220.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039844	Rapgef1	ENSMUST00000102872	ENSMUSP00000099936	TRANSLATION	protein_coding	-	CCDS15854.1	1	1086	0	6.885	0.5	220.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039844	Rapgef1	ENSMUST00000095087	ENSMUSP00000092703	TRANSLATION	protein_coding	-	CCDS38091.1	1	1224	0	6.885	0.5	220.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039844	Rapgef1	ENSMUST00000238899	ENSMUSP00000158995	TRANSLATION	protein_coding	-	-	-	1087	0	6.885	1.5	220.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000039844	Rapgef1	ENSMUST00000123953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017007	Rbpjl	ENSMUST00000017151	ENSMUSP00000017151	TRANSLATION	protein_coding	-	CCDS17035.1	1	515	7	8.35	2.7	352.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017007	Rbpjl	ENSMUST00000137427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017007	Rbpjl	ENSMUST00000109356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046020	Pofut1	ENSMUST00000152390	ENSMUSP00000128139	TRANSLATION	protein_coding	-	-	2	298	9	5.25	0	130.5	0	-4,-7	-	-	4.668	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000170297	ENSMUSP00000126063	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	0.8	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000099191	ENSMUSP00000096796	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0.8	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000123487	ENSMUSP00000126395	TRANSLATION	protein_coding	-	-	2	297	9	5.25	0	126.9	0	-4,-7	-	-	4.668	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000099192	ENSMUSP00000096797	TRANSLATION	protein_coding	-	-	1	353	7	8.05	0	222.6	0	2,-2	-	-	9.042	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000109794	ENSMUSP00000105417	TRANSLATION	protein_coding	-	-	5	352	7	8.3	0	200.7	0	2,-2	-	-	8.226	MINOR
ENSMUSG00000046020	Pofut1	ENSMUST00000049863	ENSMUSP00000053122	TRANSLATION	protein_coding	-	CCDS16909.1	1	393	11	9.8	3.9	269.2	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000046020	Pofut1	ENSMUST00000123158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027194	Ttc17	ENSMUST00000150215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027194	Ttc17	ENSMUST00000094801	ENSMUSP00000092395	TRANSLATION	protein_coding	-	-	5	956	0	0	3.9	29.8	0	0,-4	-	-	7.338	MINOR
ENSMUSG00000027194	Ttc17	ENSMUST00000150266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027194	Ttc17	ENSMUST00000111238	ENSMUSP00000106869	TRANSLATION	protein_coding	-	CCDS38185.1	5	1198	0	1.955	7.5	29.8	0	0,-4	-	-	15	PRINCIPAL:2
ENSMUSG00000027194	Ttc17	ENSMUST00000055081	ENSMUSP00000061360	TRANSLATION	protein_coding	-	-	1	625	0	1.955	0	14	0	-4,-5	-	-	8.82	MINOR
ENSMUSG00000027194	Ttc17	ENSMUST00000111237	ENSMUSP00000106868	TRANSLATION	protein_coding	-	-	5	1141	0	1.955	7.5	29.8	0	0,-4	-	-	15	ALTERNATIVE:1
ENSMUSG00000026679	Enkur	ENSMUST00000156248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026679	Enkur	ENSMUST00000147793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026679	Enkur	ENSMUST00000027992	ENSMUSP00000027992	TRANSLATION	protein_coding	-	CCDS38055.1	1	255	0	0	6.3	99.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000050556	Kcnb1	ENSMUST00000207917	ENSMUSP00000147093	TRANSLATION	protein_coding	-	CCDS17096.1	1	857	0	1.08	6.5	428.1	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000050556	Kcnb1	ENSMUST00000144351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050556	Kcnb1	ENSMUST00000059826	ENSMUSP00000057981	TRANSLATION	protein_coding	-	CCDS17096.1	1	857	0	1.08	6.5	428.1	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000050556	Kcnb1	ENSMUST00000148226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074890	Lcmt2	ENSMUST00000099486	ENSMUSP00000097085	TRANSLATION	protein_coding	-	-	1	441	0	0.12	0	0	0	-4,-6	-	-	0.948	MINOR
ENSMUSG00000074890	Lcmt2	ENSMUST00000110674	ENSMUSP00000106302	TRANSLATION	protein_coding	-	CCDS50682.1	-	686	18	0.76	1.5	89.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000102091	Olfr1034	ENSMUST00000213496	ENSMUSP00000150150	TRANSLATION	protein_coding	-	CCDS16235.1	-	310	0	0.2	7.6	168.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000111454	Olfr998	ENSMUST00000052307	ENSMUSP00000059970	TRANSLATION	protein_coding	-	CCDS16210.1	-	314	0	0	2.7	180.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000111454	Olfr998	ENSMUST00000215083	ENSMUSP00000150713	TRANSLATION	protein_coding	-	CCDS16210.1	5	314	0	0	2.7	180.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027164	Traf6	ENSMUST00000004949	ENSMUSP00000004949	TRANSLATION	protein_coding	-	CCDS16464.1	1	530	21	4.6	1.5	108.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027164	Traf6	ENSMUST00000144063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027164	Traf6	ENSMUST00000143341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000082980	Olfr1274	ENSMUST00000216111	ENSMUSP00000148849	TRANSLATION	protein_coding	-	-	5	309	0	0.2	5.1	168.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000082980	Olfr1274	ENSMUST00000120681	ENSMUSP00000151089	TRANSLATION	protein_coding	-	-	-	309	0	0.2	5.1	168.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027291	Vps39	ENSMUST00000133260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027291	Vps39	ENSMUST00000145193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027291	Vps39	ENSMUST00000132476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027291	Vps39	ENSMUST00000138854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027291	Vps39	ENSMUST00000129857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027291	Vps39	ENSMUST00000028752	ENSMUSP00000028752	TRANSLATION	protein_coding	-	CCDS16619.1	1	875	3	0	15.3	332.5	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000027291	Vps39	ENSMUST00000156296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027291	Vps39	ENSMUST00000126526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027291	Vps39	ENSMUST00000102501	ENSMUSP00000099559	TRANSLATION	protein_coding	-	CCDS38210.1	1	886	3	0	8.3	329.2	0	-4,-6	-	-	10.842	MINOR
ENSMUSG00000027291	Vps39	ENSMUST00000147085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034850	Tmem127	ENSMUST00000035871	ENSMUSP00000035434	TRANSLATION	protein_coding	-	CCDS16697.1	1	238	0	0	12	0	6	-2,0	-	-	4	PRINCIPAL:1
ENSMUSG00000034850	Tmem127	ENSMUST00000174288	ENSMUSP00000134629	TRANSLATION	protein_coding	-	-	2	154	0	0	2.2	0	6	-1,-5	-	-	0.436	MINOR
ENSMUSG00000034850	Tmem127	ENSMUST00000174503	ENSMUSP00000133701	TRANSLATION	protein_coding	stop	-	5	145	0	0	0	0	3	-2,0	-	-	-1	MINOR
ENSMUSG00000042821	Snai1	ENSMUST00000052631	ENSMUSP00000050581	TRANSLATION	protein_coding	-	CCDS17102.1	1	264	15	2.75	6.3	68.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000036160	Surf6	ENSMUST00000114043	ENSMUSP00000109677	TRANSLATION	protein_coding	-	-	5	208	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036160	Surf6	ENSMUST00000129554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036160	Surf6	ENSMUST00000047632	ENSMUSP00000048457	TRANSLATION	protein_coding	-	CCDS15812.1	1	355	0	0	0.5	129.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036160	Surf6	ENSMUST00000142131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036160	Surf6	ENSMUST00000137904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036160	Surf6	ENSMUST00000140392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036160	Surf6	ENSMUST00000127691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075139	Olfr1162	ENSMUST00000183862	ENSMUSP00000139068	TRANSLATION	protein_coding	-	CCDS16323.1	2	314	0	0.36	2.7	156.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075139	Olfr1162	ENSMUST00000099837	ENSMUSP00000097425	TRANSLATION	protein_coding	-	CCDS16323.1	-	314	0	0.36	2.7	156.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075094	Olfr1230	ENSMUST00000099787	ENSMUSP00000097375	TRANSLATION	protein_coding	-	CCDS16373.1	-	305	0	0.2	4	149	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000078940	Wfdc11	ENSMUST00000109332	ENSMUSP00000104956	TRANSLATION	protein_coding	-	CCDS50797.1	1	82	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000078940	Wfdc11	ENSMUST00000167694	ENSMUSP00000125964	TRANSLATION	protein_coding	-	CCDS50797.1	5	82	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000017720	Trp53tg5	ENSMUST00000017864	ENSMUSP00000017864	TRANSLATION	protein_coding	-	CCDS71189.1	1	238	0	0	0.5	315	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013523	Bcas1	ENSMUST00000154650	ENSMUSP00000122298	TRANSLATION	protein_coding	start	-	1	379	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013523	Bcas1	ENSMUST00000133673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013523	Bcas1	ENSMUST00000156657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013523	Bcas1	ENSMUST00000013667	ENSMUSP00000013667	TRANSLATION	protein_coding	-	CCDS17121.1	1	633	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000013523	Bcas1	ENSMUST00000109152	ENSMUSP00000104780	TRANSLATION	protein_coding	-	CCDS50806.1	1	587	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000013523	Bcas1	ENSMUST00000145920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013523	Bcas1	ENSMUST00000147577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013523	Bcas1	ENSMUST00000152461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013523	Bcas1	ENSMUST00000068137	ENSMUSP00000069437	TRANSLATION	protein_coding	-	-	5	577	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000111715	Olfr1246	ENSMUST00000213221	ENSMUSP00000149863	TRANSLATION	protein_coding	-	CCDS16385.1	5	314	0	0.2	2.7	158.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111715	Olfr1246	ENSMUST00000187990	ENSMUSP00000140066	TRANSLATION	protein_coding	-	CCDS16385.1	-	314	0	0.2	2.7	158.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111715	Olfr1246	ENSMUST00000217192	ENSMUSP00000149252	TRANSLATION	protein_coding	-	CCDS16385.1	5	314	0	0.2	2.7	158.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000111715	Olfr1246	ENSMUST00000217254	ENSMUSP00000150876	TRANSLATION	protein_coding	-	CCDS16385.1	5	314	0	0.2	2.7	158.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000394	Gcg	ENSMUST00000102733	ENSMUSP00000099794	TRANSLATION	protein_coding	-	CCDS16066.1	1	180	0	2.33	6.4	147.9	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000000394	Gcg	ENSMUST00000136686	ENSMUSP00000115892	TRANSLATION	protein_coding	stop	-	3	173	0	2	0	147.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000000394	Gcg	ENSMUST00000155624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027276	Jag1	ENSMUST00000133640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027276	Jag1	ENSMUST00000028735	ENSMUSP00000028735	TRANSLATION	protein_coding	-	CCDS16797.1	1	1218	63	14.952	7.5	560.3	0	0,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000062061	Obp2a	ENSMUST00000077667	ENSMUSP00000076851	TRANSLATION	protein_coding	-	CCDS15788.1	1	176	0	4.064	1.5	98.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000004085	Map3k20	ENSMUST00000112073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004085	Map3k20	ENSMUST00000090824	ENSMUSP00000088334	TRANSLATION	protein_coding	-	CCDS38143.1	1	802	20	8.66	1.5	250.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004085	Map3k20	ENSMUST00000150126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004085	Map3k20	ENSMUST00000135204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004085	Map3k20	ENSMUST00000135469	ENSMUSP00000118983	TRANSLATION	protein_coding	-	CCDS50605.1	1	454	20	8.66	0.5	213.7	0	-4,-5	-	-	15.78	MINOR
ENSMUSG00000004085	Map3k20	ENSMUST00000144111	ENSMUSP00000119340	TRANSLATION	protein_coding	stop	-	5	74	10	1.75	0	31.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035666	Gtf3c4	ENSMUST00000156468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035666	Gtf3c4	ENSMUST00000037117	ENSMUSP00000042265	TRANSLATION	protein_coding	-	CCDS15847.1	1	817	0	0	1.5	145.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035666	Gtf3c4	ENSMUST00000171404	ENSMUSP00000132171	TRANSLATION	protein_coding	-	CCDS50550.1	1	676	0	0	0.5	83.4	0	-4,-5	-	-	2.262	MINOR
ENSMUSG00000035666	Gtf3c4	ENSMUST00000124390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027004	Frzb	ENSMUST00000028389	ENSMUSP00000028389	TRANSLATION	protein_coding	-	CCDS16176.1	1	323	0	1	6.3	178.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000027004	Frzb	ENSMUST00000142459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078201	Tmem203	ENSMUST00000104998	ENSMUSP00000100614	TRANSLATION	protein_coding	-	CCDS38070.1	-	136	0	0	15.5	0	0	2,-3	-	-	4	PRINCIPAL:1
ENSMUSG00000027009	Itga4	ENSMUST00000141094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027009	Itga4	ENSMUST00000135919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027009	Itga4	ENSMUST00000099972	ENSMUSP00000099718	TRANSLATION	protein_coding	-	CCDS16168.1	1	1032	17	19.77	1.5	349.3	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027009	Itga4	ENSMUST00000126312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027009	Itga4	ENSMUST00000155105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074965	Olfr1277	ENSMUST00000099619	ENSMUSP00000097214	TRANSLATION	protein_coding	-	CCDS16517.1	-	303	0	0.36	3.9	168.8	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000074965	Olfr1277	ENSMUST00000214760	ENSMUSP00000150703	TRANSLATION	protein_coding	-	CCDS16517.1	5	303	0	0.36	3.9	168.8	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000034848	Ttc21b	ENSMUST00000169968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034848	Ttc21b	ENSMUST00000125446	ENSMUSP00000131758	TRANSLATION	protein_coding	-	CCDS71061.1	1	1269	0	3.19	0.5	48.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000034848	Ttc21b	ENSMUST00000102718	ENSMUSP00000099779	TRANSLATION	protein_coding	-	CCDS16076.1	1	1315	0	3.19	7.5	48.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034848	Ttc21b	ENSMUST00000131503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068859	Sp9	ENSMUST00000147133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068859	Sp9	ENSMUST00000090813	ENSMUSP00000088322	TRANSLATION	protein_coding	-	CCDS16126.1	1	484	12	0.2	5.2	67.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027075	Slc43a1	ENSMUST00000111625	ENSMUSP00000107252	TRANSLATION	protein_coding	-	CCDS38162.1	1	590	0	0	0.5	47.8	14	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000027075	Slc43a1	ENSMUST00000146816	ENSMUSP00000121368	TRANSLATION	protein_coding	stop	-	2	138	0	0	0	0	4	-3,-7	-	-	-1	MINOR
ENSMUSG00000027075	Slc43a1	ENSMUST00000028469	ENSMUSP00000028469	TRANSLATION	protein_coding	-	CCDS50624.1	1	607	0	0	1.5	47.8	14	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000027075	Slc43a1	ENSMUST00000145004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027075	Slc43a1	ENSMUST00000121114	ENSMUSP00000112642	TRANSLATION	protein_coding	-	CCDS38163.1	1	564	0	0	0.5	47.8	14	-3,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000027075	Slc43a1	ENSMUST00000111624	ENSMUSP00000107251	TRANSLATION	protein_coding	-	CCDS38163.1	1	564	0	0	0.5	47.8	14	-3,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000068818	Olfr1132	ENSMUST00000216082	ENSMUSP00000149683	TRANSLATION	protein_coding	-	CCDS16299.1	5	308	0	0.2	8.8	154.4	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000068818	Olfr1132	ENSMUST00000090711	ENSMUSP00000088213	TRANSLATION	protein_coding	-	CCDS16299.1	-	308	0	0.2	8.8	154.4	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074766	Ism1	ENSMUST00000099307	ENSMUSP00000096910	TRANSLATION	protein_coding	-	-	5	454	0	0.5	0	121.6	0	2,-2	-	-	12	MINOR
ENSMUSG00000074766	Ism1	ENSMUST00000184404	ENSMUSP00000139280	TRANSLATION	protein_coding	-	CCDS50730.2	1	461	0	0.5	7.6	121.6	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026956	Uap1l1	ENSMUST00000151131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026956	Uap1l1	ENSMUST00000138985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026956	Uap1l1	ENSMUST00000131025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026956	Uap1l1	ENSMUST00000146226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026956	Uap1l1	ENSMUST00000152537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026956	Uap1l1	ENSMUST00000102925	ENSMUSP00000099989	TRANSLATION	protein_coding	-	CCDS15767.1	1	507	21	8.15	1.5	206.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000075095	Olfr1229	ENSMUST00000214593	ENSMUSP00000150344	TRANSLATION	protein_coding	-	CCDS16372.1	5	311	0	0.2	4	170	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075095	Olfr1229	ENSMUST00000213883	ENSMUSP00000150537	TRANSLATION	protein_coding	-	CCDS16372.1	5	311	0	0.2	4	170	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075095	Olfr1229	ENSMUST00000099788	ENSMUSP00000097376	TRANSLATION	protein_coding	-	CCDS16372.1	-	311	0	0.2	4	170	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000044145	1810024B03Rik	ENSMUST00000056146	ENSMUSP00000061355	TRANSLATION	protein_coding	-	CCDS50702.1	1	200	3	0.8	0.5	156.2	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000044145	1810024B03Rik	ENSMUST00000150956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005882	Uqcc1	ENSMUST00000141501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005882	Uqcc1	ENSMUST00000152818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005882	Uqcc1	ENSMUST00000162258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005882	Uqcc1	ENSMUST00000109631	ENSMUSP00000105259	TRANSLATION	protein_coding	-	-	5	227	0	0	1.2	143.3	0	-4,0	-	-	6.065	ALTERNATIVE:2
ENSMUSG00000005882	Uqcc1	ENSMUST00000159238	ENSMUSP00000125200	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000136933	ENSMUSP00000116390	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000109632	ENSMUSP00000105260	TRANSLATION	protein_coding	-	-	5	269	0	0	1.2	100.4	0	-4,-1	-	-	3.491	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000006036	ENSMUSP00000006036	TRANSLATION	protein_coding	-	-	5	215	0	0	0	67	0	-4,-1	-	-	1.422	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000139232	ENSMUSP00000123019	TRANSLATION	protein_coding	start/stop	-	5	243	0	0	0	143.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000161484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005882	Uqcc1	ENSMUST00000162749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005882	Uqcc1	ENSMUST00000152766	ENSMUSP00000122886	TRANSLATION	protein_coding	start	-	5	262	0	0	0	143.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000146995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005882	Uqcc1	ENSMUST00000123790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005882	Uqcc1	ENSMUST00000155680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005882	Uqcc1	ENSMUST00000109636	ENSMUSP00000105264	TRANSLATION	protein_coding	-	CCDS16957.2	1	295	0	0	4.1	143.3	0	-4,-1	-	-	7	PRINCIPAL:2
ENSMUSG00000005882	Uqcc1	ENSMUST00000151078	ENSMUSP00000123111	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000142655	ENSMUSP00000118094	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005882	Uqcc1	ENSMUST00000133726	ENSMUSP00000121610	TRANSLATION	nonsense_mediated_decay	-	-	5	120	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000034738	Nostrin	ENSMUST00000041865	ENSMUSP00000036923	TRANSLATION	protein_coding	-	CCDS16087.1	1	506	0	4.915	0.5	102	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034738	Nostrin	ENSMUST00000141276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078869	Gm14409	ENSMUST00000108963	ENSMUSP00000104591	TRANSLATION	protein_coding	-	-	5	349	35	0.8	0	190.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070856	Olfr1115	ENSMUST00000213513	ENSMUSP00000150221	TRANSLATION	protein_coding	-	CCDS16286.1	5	326	0	0.36	2.7	182	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070856	Olfr1115	ENSMUST00000217196	ENSMUSP00000150996	TRANSLATION	protein_coding	-	CCDS16286.1	3	326	0	0.36	2.7	182	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070856	Olfr1115	ENSMUST00000214119	ENSMUSP00000150092	TRANSLATION	protein_coding	-	CCDS16286.1	5	326	0	0.36	2.7	182	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070856	Olfr1115	ENSMUST00000081986	ENSMUSP00000080647	TRANSLATION	protein_coding	-	CCDS16286.1	-	326	0	0.36	2.7	182	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027428	Rbbp9	ENSMUST00000140340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027428	Rbbp9	ENSMUST00000028915	ENSMUSP00000028915	TRANSLATION	protein_coding	-	CCDS16821.1	1	186	4	4.25	7.6	51.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000068267	Cenpb	ENSMUST00000089510	ENSMUSP00000086938	TRANSLATION	protein_coding	-	CCDS16757.1	-	599	0	0.6	0.5	483	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001998	Ap4e1	ENSMUST00000129859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001998	Ap4e1	ENSMUST00000142740	ENSMUSP00000135257	TRANSLATION	nonsense_mediated_decay	start	-	5	107	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001998	Ap4e1	ENSMUST00000110394	ENSMUSP00000106024	TRANSLATION	protein_coding	-	-	1	393	0	6.134	0	217.4	0	-4,-7	-	-	1.122	MINOR
ENSMUSG00000001998	Ap4e1	ENSMUST00000110393	ENSMUSP00000106023	TRANSLATION	nonsense_mediated_decay	-	-	2	50	0	0.32	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001998	Ap4e1	ENSMUST00000002063	ENSMUSP00000002063	TRANSLATION	protein_coding	-	CCDS38231.1	1	1122	0	8.574	0.5	408.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001998	Ap4e1	ENSMUST00000177372	ENSMUSP00000135449	TRANSLATION	nonsense_mediated_decay	-	-	5	292	0	3.57	0	156	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001998	Ap4e1	ENSMUST00000175663	ENSMUSP00000135599	TRANSLATION	nonsense_mediated_decay	-	-	5	367	0	4.97	0	197.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001998	Ap4e1	ENSMUST00000149254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078198	Olfr364-ps1	ENSMUST00000104995	ENSMUSP00000100611	TRANSLATION	protein_coding	-	-	5	307	0	0.42	1	193.3	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000078198	Olfr364-ps1	ENSMUST00000217298	ENSMUSP00000151166	TRANSLATION	protein_coding	-	-	5	307	0	0.42	1	193.3	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000078198	Olfr364-ps1	ENSMUST00000214905	ENSMUSP00000150436	TRANSLATION	protein_coding	-	-	5	307	0	0.42	1	193.3	5	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027584	Oprl1	ENSMUST00000184795	ENSMUSP00000138979	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	1	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000148334	ENSMUSP00000118664	TRANSLATION	protein_coding	stop	-	3	141	0	2.33	0	71.9	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000071585	ENSMUSP00000071513	TRANSLATION	protein_coding	-	CCDS17222.1	1	367	0	4.33	1.5	207.7	12	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000027584	Oprl1	ENSMUST00000183693	ENSMUSP00000138810	TRANSLATION	nonsense_mediated_decay	-	-	1	95	0	1	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000108763	ENSMUSP00000104394	TRANSLATION	protein_coding	-	CCDS84606.1	1	353	0	3.794	1.5	193.3	8	-4,-7	-	-	10.062	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000238942	ENSMUSP00000159197	TRANSLATION	protein_coding	-	-	-	396	0	4.33	1.5	207.7	12	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027584	Oprl1	ENSMUST00000184127	ENSMUSP00000139119	TRANSLATION	nonsense_mediated_decay	-	-	1	111	0	1	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000151241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027584	Oprl1	ENSMUST00000108768	ENSMUSP00000104399	TRANSLATION	protein_coding	-	CCDS17222.1	1	367	0	4.33	1.5	207.7	12	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000027584	Oprl1	ENSMUST00000108766	ENSMUSP00000104397	TRANSLATION	protein_coding	-	-	1	213	0	3.63	0	125.6	8	-4,-7	-	-	5.676	MINOR
ENSMUSG00000027584	Oprl1	ENSMUST00000126835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027584	Oprl1	ENSMUST00000108767	ENSMUSP00000104398	TRANSLATION	protein_coding	-	CCDS17222.1	1	367	0	4.33	1.5	207.7	12	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000035949	Fbxw2	ENSMUST00000201806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035949	Fbxw2	ENSMUST00000145180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000134323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000113080	ENSMUSP00000108703	TRANSLATION	protein_coding	-	CCDS15952.1	1	454	0	3.845	14.5	82.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000035949	Fbxw2	ENSMUST00000145660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000131534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000113075	ENSMUSP00000108698	TRANSLATION	protein_coding	-	CCDS50574.1	1	359	0	3.465	0.5	82.5	0	-4,-7	-	-	11.238	MINOR
ENSMUSG00000035949	Fbxw2	ENSMUST00000150865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000028220	ENSMUSP00000028220	TRANSLATION	protein_coding	-	CCDS15952.1	1	454	0	3.845	14.5	82.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000035949	Fbxw2	ENSMUST00000113077	ENSMUSP00000108700	TRANSLATION	protein_coding	-	-	5	389	0	3.045	2.4	59.4	0	-4,-7	-	-	9.134	MINOR
ENSMUSG00000035949	Fbxw2	ENSMUST00000113078	ENSMUSP00000108701	TRANSLATION	protein_coding	-	CCDS15952.1	1	454	0	3.845	14.5	82.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000035949	Fbxw2	ENSMUST00000126051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000156130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035949	Fbxw2	ENSMUST00000091020	ENSMUSP00000088541	TRANSLATION	protein_coding	-	CCDS50573.1	1	325	0	3.425	5.2	51.1	0	-4,-5	-	-	10.118	MINOR
ENSMUSG00000099041	Gm28035	ENSMUST00000139454	ENSMUSP00000139038	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	810	0	1	12.8	586.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000027217	Tspan18	ENSMUST00000028646	ENSMUSP00000028646	TRANSLATION	protein_coding	-	CCDS38182.1	1	248	0	3.32	7.5	172.2	4	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027217	Tspan18	ENSMUST00000181716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027217	Tspan18	ENSMUST00000154951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027217	Tspan18	ENSMUST00000111265	ENSMUSP00000106896	TRANSLATION	protein_coding	-	CCDS38182.1	5	248	0	3.32	7.5	172.2	4	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027217	Tspan18	ENSMUST00000152141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026979	Psd4	ENSMUST00000102942	ENSMUSP00000100006	TRANSLATION	protein_coding	-	CCDS15737.1	1	1005	0	6.45	0.5	225.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026979	Psd4	ENSMUST00000132924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026979	Psd4	ENSMUST00000131930	ENSMUSP00000142303	TRANSLATION	protein_coding	stop	-	2	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026979	Psd4	ENSMUST00000166388	ENSMUSP00000132395	TRANSLATION	protein_coding	-	CCDS15737.1	1	1005	0	6.45	0.5	225.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026979	Psd4	ENSMUST00000056641	ENSMUSP00000062415	TRANSLATION	protein_coding	-	CCDS15737.1	1	1005	0	6.45	0.5	225.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026979	Psd4	ENSMUST00000127242	ENSMUSP00000141819	TRANSLATION	protein_coding	stop	-	2	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026979	Psd4	ENSMUST00000140547	ENSMUSP00000141943	TRANSLATION	protein_coding	stop	-	2	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026979	Psd4	ENSMUST00000140303	ENSMUSP00000142085	TRANSLATION	nonsense_mediated_decay	start	-	5	32	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026979	Psd4	ENSMUST00000142522	ENSMUSP00000141910	TRANSLATION	protein_coding	stop	-	5	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026979	Psd4	ENSMUST00000133730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027035	Cers6	ENSMUST00000028426	ENSMUSP00000028426	TRANSLATION	protein_coding	-	CCDS16086.1	1	384	0	2	8.3	167.1	3	-4,-7	-	-	14.235	PRINCIPAL:3
ENSMUSG00000027035	Cers6	ENSMUST00000176018	ENSMUSP00000135604	TRANSLATION	protein_coding	-	CCDS84532.1	5	392	0	2	10.8	167.1	3	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000027035	Cers6	ENSMUST00000155748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027035	Cers6	ENSMUST00000141983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027035	Cers6	ENSMUST00000175684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027035	Cers6	ENSMUST00000183755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027035	Cers6	ENSMUST00000141498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038840	Birc7	ENSMUST00000108875	ENSMUSP00000104503	TRANSLATION	protein_coding	-	CCDS50840.1	5	285	8	3.8	1.5	114.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000038840	Birc7	ENSMUST00000137859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046085	4931422A03Rik	ENSMUST00000056170	ENSMUSP00000061324	TRANSLATION	protein_coding	-	-	1	113	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000046085	4931422A03Rik	ENSMUST00000123966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046085	4931422A03Rik	ENSMUST00000138867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000125270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000134081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000103160	ENSMUSP00000099449	TRANSLATION	protein_coding	-	-	5	339	0	5.8	1.2	222.9	0	-4,-5	-	-	10.864	MINOR
ENSMUSG00000027455	Nsfl1c	ENSMUST00000133197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000146695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000156182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027455	Nsfl1c	ENSMUST00000153333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027455	Nsfl1c	ENSMUST00000089140	ENSMUSP00000086542	TRANSLATION	protein_coding	-	CCDS16868.1	5	372	0	6.4	13.5	222.9	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027455	Nsfl1c	ENSMUST00000028949	ENSMUSP00000028949	TRANSLATION	protein_coding	-	CCDS71160.1	1	370	0	6.4	13.5	222.9	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000027455	Nsfl1c	ENSMUST00000139229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044627	Swi5	ENSMUST00000050410	ENSMUSP00000057512	TRANSLATION	protein_coding	-	-	1	131	0	1.2	0	83.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044627	Swi5	ENSMUST00000140406	ENSMUSP00000139369	TRANSLATION	nonsense_mediated_decay	start	-	5	140	0	0.75	0	57.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044627	Swi5	ENSMUST00000183946	ENSMUSP00000139299	TRANSLATION	protein_coding	-	CCDS50566.1	1	89	0	1.2	1.5	83.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000044627	Swi5	ENSMUST00000127131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044627	Swi5	ENSMUST00000113397	ENSMUSP00000109024	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044627	Swi5	ENSMUST00000113400	ENSMUSP00000109027	TRANSLATION	protein_coding	-	CCDS71026.1	1	121	0	1.2	0.5	83.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044627	Swi5	ENSMUST00000113395	ENSMUSP00000109022	TRANSLATION	protein_coding	-	CCDS50566.1	5	89	0	1.2	1.5	83.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000096240	Gm21830	ENSMUST00000178898	ENSMUSP00000136315	TRANSLATION	protein_coding	start/stop	-	5	45	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000037727	Avp	ENSMUST00000046001	ENSMUSP00000035551	TRANSLATION	protein_coding	-	CCDS16746.1	1	168	13	1.6	1.5	132.2	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000054074	Skida1	ENSMUST00000142856	ENSMUSP00000122112	TRANSLATION	protein_coding	stop	-	2	208	0	0.4	0	55.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054074	Skida1	ENSMUST00000091420	ENSMUSP00000088982	TRANSLATION	protein_coding	-	CCDS57154.1	5	909	0	0.4	0.5	658.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000054074	Skida1	ENSMUST00000066885	ENSMUSP00000068520	TRANSLATION	protein_coding	-	-	1	822	0	0.4	0	658.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000054074	Skida1	ENSMUST00000152908	ENSMUSP00000114785	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054074	Skida1	ENSMUST00000173604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075334	Rprm	ENSMUST00000100089	ENSMUSP00000097667	TRANSLATION	protein_coding	-	CCDS16040.1	-	109	0	0	7.6	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000017418	Arl5b	ENSMUST00000129509	ENSMUSP00000117885	TRANSLATION	nonsense_mediated_decay	start	-	3	31	7	0.816	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017418	Arl5b	ENSMUST00000239125	ENSMUSP00000158934	TRANSLATION	protein_coding	-	CCDS15704.1	-	180	17	5.66	21.5	222.9	0	-4,-7	-	-	22	PRINCIPAL:2
ENSMUSG00000017418	Arl5b	ENSMUST00000017562	ENSMUSP00000017562	TRANSLATION	protein_coding	-	-	1	171	17	5.424	0	218.8	0	-4,-5	-	-	17.28	MINOR
ENSMUSG00000017418	Arl5b	ENSMUST00000193836	ENSMUSP00000141546	TRANSLATION	protein_coding	-	-	2	34	0	0.5	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000017418	Arl5b	ENSMUST00000069870	ENSMUSP00000069725	TRANSLATION	protein_coding	-	-	1	179	17	5.66	21.5	222.9	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000017418	Arl5b	ENSMUST00000193883	ENSMUSP00000141992	TRANSLATION	protein_coding	start	-	3	57	6	1.5	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017418	Arl5b	ENSMUST00000192653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017418	Arl5b	ENSMUST00000128682	ENSMUSP00000120178	TRANSLATION	nonsense_mediated_decay	-	-	5	39	7	1.25	0	37.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000146626	ENSMUSP00000121434	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000155631	ENSMUSP00000114786	TRANSLATION	protein_coding	stop	-	3	139	4	1.125	0	46.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000109801	ENSMUSP00000105426	TRANSLATION	nonsense_mediated_decay	-	-	5	234	16	2.39	0	125.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000152158	ENSMUSP00000122494	TRANSLATION	nonsense_mediated_decay	-	-	1	126	0	0.42	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000103155	ENSMUSP00000099444	TRANSLATION	protein_coding	-	CCDS16903.1	1	464	24	3.915	0.5	287.1	0	-4,-6	-	-	18	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000165343	ENSMUSP00000131839	TRANSLATION	nonsense_mediated_decay	start	-	5	73	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074673	Ttll9	ENSMUST00000150218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074673	Ttll9	ENSMUST00000151641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074673	Ttll9	ENSMUST00000099197	ENSMUSP00000096803	TRANSLATION	protein_coding	-	CCDS38283.1	1	461	24	3.915	5.1	287.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000038467	Chmp4b	ENSMUST00000151668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038467	Chmp4b	ENSMUST00000136788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038467	Chmp4b	ENSMUST00000044277	ENSMUSP00000036206	TRANSLATION	protein_coding	-	CCDS16938.1	1	224	0	4.75	11	196.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027162	Lin7c	ENSMUST00000151163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027162	Lin7c	ENSMUST00000028583	ENSMUSP00000028583	TRANSLATION	protein_coding	-	CCDS16509.1	1	197	3	4.25	19.5	154.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027517	Ankrd60	ENSMUST00000109112	ENSMUSP00000104740	TRANSLATION	protein_coding	-	-	3	198	0	1.88	1	37.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027517	Ankrd60	ENSMUST00000119453	ENSMUSP00000113291	TRANSLATION	protein_coding	-	CCDS50815.1	2	318	0	1.88	0.5	37.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000027517	Ankrd60	ENSMUST00000147693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027517	Ankrd60	ENSMUST00000239457	ENSMUSP00000159317	TRANSLATION	protein_coding	-	-	-	229	0	1.88	0	37.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026927	Entr1	ENSMUST00000134737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000132574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000136972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000137814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000028293	ENSMUSP00000028293	TRANSLATION	protein_coding	-	CCDS50541.1	1	382	0	0	1.5	0	0	-4,-2	-	-	0.172	ALTERNATIVE:2
ENSMUSG00000026927	Entr1	ENSMUST00000114100	ENSMUSP00000109735	TRANSLATION	protein_coding	-	-	5	409	0	0	3.9	0	0	-4,0	-	-	1	ALTERNATIVE:2
ENSMUSG00000026927	Entr1	ENSMUST00000077983	ENSMUSP00000077133	TRANSLATION	protein_coding	-	CCDS50540.1	1	359	0	0	1.5	0	0	-4,-2	-	-	0.172	ALTERNATIVE:2
ENSMUSG00000026927	Entr1	ENSMUST00000140074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000130954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000139738	ENSMUSP00000121256	TRANSLATION	protein_coding	start/stop	-	2	144	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000026927	Entr1	ENSMUST00000133737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000140115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026927	Entr1	ENSMUST00000114102	ENSMUSP00000109737	TRANSLATION	protein_coding	-	CCDS15803.2	1	432	0	0	1.5	0	0	-4,0	-	-	0.172	PRINCIPAL:3
ENSMUSG00000087035	Tmem74bos	ENSMUST00000137422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087035	Tmem74bos	ENSMUST00000149319	ENSMUSP00000158580	TRANSLATION	protein_coding	-	-	1	98	0	0	2.2	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000039205	Ciz1	ENSMUST00000132028	ENSMUSP00000120295	TRANSLATION	protein_coding	stop	-	2	194	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000113334	ENSMUSP00000108960	TRANSLATION	protein_coding	-	CCDS15911.1	5	845	10	0	0.5	30.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039205	Ciz1	ENSMUST00000136079	ENSMUSP00000116812	TRANSLATION	protein_coding	stop	-	5	226	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000149184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000132290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039205	Ciz1	ENSMUST00000151806	ENSMUSP00000119429	TRANSLATION	protein_coding	start/stop	-	5	262	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000137220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000113332	ENSMUSP00000108958	TRANSLATION	protein_coding	-	CCDS57166.1	1	791	10	0	0.5	30.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039205	Ciz1	ENSMUST00000048964	ENSMUSP00000048428	TRANSLATION	protein_coding	-	CCDS15911.1	1	845	10	0	0.5	30.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039205	Ciz1	ENSMUST00000131152	ENSMUSP00000141211	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000134141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000125818	ENSMUSP00000117937	TRANSLATION	protein_coding	start	-	3	235	6	0	0	30.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000192055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000125769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039205	Ciz1	ENSMUST00000136325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039205	Ciz1	ENSMUST00000192758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000125482	ENSMUSP00000120019	TRANSLATION	protein_coding	start/stop	-	5	288	6	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000113338	ENSMUSP00000108964	TRANSLATION	protein_coding	-	CCDS15911.1	5	845	10	0	0.5	30.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039205	Ciz1	ENSMUST00000113331	ENSMUSP00000108957	TRANSLATION	protein_coding	-	-	5	821	10	0	0.5	30.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000039205	Ciz1	ENSMUST00000145957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039205	Ciz1	ENSMUST00000139637	ENSMUSP00000122469	TRANSLATION	protein_coding	start/stop	-	3	245	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039205	Ciz1	ENSMUST00000147338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026790	Odf2	ENSMUST00000113759	ENSMUSP00000109388	TRANSLATION	protein_coding	-	CCDS50555.1	1	826	0	0	5.1	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000026790	Odf2	ENSMUST00000113757	ENSMUSP00000109386	TRANSLATION	protein_coding	-	-	5	806	0	0	2.9	0	0	-4,-5	-	-	0.926	ALTERNATIVE:2
ENSMUSG00000026790	Odf2	ENSMUST00000129960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026790	Odf2	ENSMUST00000046571	ENSMUSP00000049272	TRANSLATION	protein_coding	-	CCDS50556.1	2	825	0	0	5.1	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000026790	Odf2	ENSMUST00000113764	ENSMUSP00000109393	TRANSLATION	protein_coding	-	CCDS15861.1	5	638	0	0	3.9	0	0	-4,-7	-	-	1.414	PRINCIPAL:3
ENSMUSG00000026790	Odf2	ENSMUST00000133233	ENSMUSP00000117628	TRANSLATION	protein_coding	stop	-	2	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000123335	ENSMUSP00000121207	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000148883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026790	Odf2	ENSMUST00000113765	ENSMUSP00000109394	TRANSLATION	protein_coding	-	-	5	830	0	0	5.1	0	0	-4,-2	-	-	2	ALTERNATIVE:1
ENSMUSG00000026790	Odf2	ENSMUST00000113763	ENSMUSP00000109392	TRANSLATION	protein_coding	-	CCDS15861.1	5	638	0	0	3.9	0	0	-4,-7	-	-	1.414	PRINCIPAL:3
ENSMUSG00000026790	Odf2	ENSMUST00000130899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026790	Odf2	ENSMUST00000152503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026790	Odf2	ENSMUST00000028128	ENSMUSP00000028128	TRANSLATION	protein_coding	-	CCDS15861.1	1	638	0	0	3.9	0	0	-4,-7	-	-	1.414	PRINCIPAL:3
ENSMUSG00000026790	Odf2	ENSMUST00000113762	ENSMUSP00000109391	TRANSLATION	protein_coding	-	-	5	657	0	0	1.2	0	0	-4,-2	-	-	0.098	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000184845	ENSMUSP00000139390	TRANSLATION	nonsense_mediated_decay	-	-	5	680	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000152026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026790	Odf2	ENSMUST00000150827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026790	Odf2	ENSMUST00000113756	ENSMUSP00000109385	TRANSLATION	protein_coding	-	CCDS50556.1	1	825	0	0	5.1	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000026790	Odf2	ENSMUST00000131165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026790	Odf2	ENSMUST00000126103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026790	Odf2	ENSMUST00000113755	ENSMUSP00000109384	TRANSLATION	protein_coding	-	CCDS50557.1	1	652	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000152932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026790	Odf2	ENSMUST00000137558	ENSMUSP00000117887	TRANSLATION	protein_coding	start/stop	-	3	271	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000113767	ENSMUSP00000109396	TRANSLATION	protein_coding	-	CCDS50554.1	1	701	0	0	2.7	0	0	-4,-2	-	-	0.83	MINOR
ENSMUSG00000026790	Odf2	ENSMUST00000153216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044923	Olfr1030	ENSMUST00000056849	ENSMUSP00000053309	TRANSLATION	protein_coding	-	CCDS16231.1	5	318	0	0.36	6.6	193.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050114	Prdx6b	ENSMUST00000057072	ENSMUSP00000133276	TRANSLATION	protein_coding	-	CCDS38158.1	-	224	0	1	7.6	136.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075200	Olfr1044	ENSMUST00000215739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075200	Olfr1044	ENSMUST00000215171	ENSMUSP00000150199	TRANSLATION	protein_coding	-	CCDS16242.1	5	314	0	0.16	2.7	196.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075200	Olfr1044	ENSMUST00000099906	ENSMUSP00000097490	TRANSLATION	protein_coding	-	CCDS16242.1	-	314	0	0.16	2.7	196.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075200	Olfr1044	ENSMUST00000215285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111239	Olfr1248	ENSMUST00000216129	ENSMUSP00000150117	TRANSLATION	protein_coding	-	CCDS16387.1	-	307	0	0.42	1.5	165.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027598	Itch	ENSMUST00000109685	ENSMUSP00000105307	TRANSLATION	protein_coding	-	CCDS38293.1	1	864	6	18.5	6.3	520.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027598	Itch	ENSMUST00000126648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027598	Itch	ENSMUST00000138468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027598	Itch	ENSMUST00000123497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027598	Itch	ENSMUST00000029126	ENSMUSP00000029126	TRANSLATION	protein_coding	-	CCDS38293.1	1	864	6	18.5	6.3	520.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027598	Itch	ENSMUST00000155360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027598	Itch	ENSMUST00000142147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027435	Cd93	ENSMUST00000099269	ENSMUSP00000096876	TRANSLATION	protein_coding	-	CCDS16839.1	1	644	17	0	0.5	139.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095362	Gm14325	ENSMUST00000188914	ENSMUSP00000140685	TRANSLATION	protein_coding	start	-	5	497	59	2.05	0.5	398.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095362	Gm14325	ENSMUST00000150650	ENSMUSP00000118192	TRANSLATION	protein_coding	-	-	2	70	0	1.45	0	77.5	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000095362	Gm14325	ENSMUST00000108939	ENSMUSP00000104567	TRANSLATION	protein_coding	-	CCDS71209.1	2	498	59	2.05	0.5	398.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027270	Lamp5	ENSMUST00000144403	ENSMUSP00000120703	TRANSLATION	protein_coding	stop	-	2	91	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000027270	Lamp5	ENSMUST00000057503	ENSMUSP00000061180	TRANSLATION	protein_coding	-	CCDS16789.1	1	280	0	0	2.8	81.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027270	Lamp5	ENSMUST00000143777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027270	Lamp5	ENSMUST00000123436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027270	Lamp5	ENSMUST00000154674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059540	Tcea2	ENSMUST00000136145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059540	Tcea2	ENSMUST00000126623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059540	Tcea2	ENSMUST00000125892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059540	Tcea2	ENSMUST00000129745	ENSMUSP00000119646	TRANSLATION	protein_coding	start	-	1	292	4	6.48	0	245.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059540	Tcea2	ENSMUST00000129006	ENSMUSP00000120083	TRANSLATION	protein_coding	start	-	5	297	4	6.48	0	245.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059540	Tcea2	ENSMUST00000103042	ENSMUSP00000099331	TRANSLATION	protein_coding	-	CCDS17219.1	1	299	4	7.23	5.1	245.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059540	Tcea2	ENSMUST00000129686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059540	Tcea2	ENSMUST00000126844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015090	Ptgds	ENSMUST00000015234	ENSMUSP00000015234	TRANSLATION	protein_coding	-	CCDS38074.1	1	189	0	4.75	1.5	113	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015090	Ptgds	ENSMUST00000114251	ENSMUSP00000109889	TRANSLATION	protein_coding	-	CCDS38074.1	5	189	0	4.75	1.5	113	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015090	Ptgds	ENSMUST00000137417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015090	Ptgds	ENSMUST00000114259	ENSMUSP00000109897	TRANSLATION	protein_coding	-	CCDS38074.1	2	189	0	4.75	1.5	113	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015090	Ptgds	ENSMUST00000144016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075088	Olfr1239	ENSMUST00000216762	ENSMUSP00000150225	TRANSLATION	protein_coding	-	CCDS16379.1	5	305	0	0.32	5.2	157.5	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075088	Olfr1239	ENSMUST00000099780	ENSMUSP00000097368	TRANSLATION	protein_coding	-	CCDS16379.1	-	305	0	0.32	5.2	157.5	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075088	Olfr1239	ENSMUST00000217181	ENSMUSP00000149898	TRANSLATION	protein_coding	-	CCDS16379.1	5	305	0	0.32	5.2	157.5	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027351	Spred1	ENSMUST00000110901	ENSMUSP00000106526	TRANSLATION	protein_coding	-	CCDS71115.1	1	229	0	2.531	0.5	46.9	0	-4,-5	-	-	6.57	MINOR
ENSMUSG00000027351	Spred1	ENSMUST00000028829	ENSMUSP00000028829	TRANSLATION	protein_coding	-	CCDS16570.1	1	444	0	2.531	7.5	137.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074576	Mocs3	ENSMUST00000099071	ENSMUSP00000096670	TRANSLATION	protein_coding	-	CCDS50802.1	-	460	22	0.6	4	256.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037523	Mavs	ENSMUST00000130597	ENSMUSP00000138401	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	1.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037523	Mavs	ENSMUST00000041362	ENSMUSP00000038339	TRANSLATION	protein_coding	-	CCDS16760.1	1	503	0	2	0.5	67.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037523	Mavs	ENSMUST00000132694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037523	Mavs	ENSMUST00000110199	ENSMUSP00000105828	TRANSLATION	protein_coding	-	CCDS16760.1	1	503	0	2	0.5	67.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061295	Olfr1261	ENSMUST00000216953	ENSMUSP00000150711	TRANSLATION	protein_coding	-	CCDS16400.1	5	306	0	0.48	5.1	140.9	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000061295	Olfr1261	ENSMUST00000213909	ENSMUSP00000150341	TRANSLATION	protein_coding	-	CCDS16400.1	2	306	0	0.48	5.1	140.9	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000061295	Olfr1261	ENSMUST00000111509	ENSMUSP00000107134	TRANSLATION	protein_coding	stop	-	2	133	0	0.48	0	71.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000061295	Olfr1261	ENSMUST00000077785	ENSMUSP00000076959	TRANSLATION	protein_coding	-	CCDS16400.1	-	306	0	0.48	5.1	140.9	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000017004	Svs5	ENSMUST00000017148	ENSMUSP00000017148	TRANSLATION	protein_coding	-	CCDS17032.1	1	122	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000017004	Svs5	ENSMUST00000149370	ENSMUSP00000119963	TRANSLATION	protein_coding	start	-	2	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068815	Olfr1143	ENSMUST00000099852	ENSMUSP00000097438	TRANSLATION	protein_coding	-	-	5	310	0	0.2	5.2	153.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000068815	Olfr1143	ENSMUST00000090708	ENSMUSP00000088210	TRANSLATION	protein_coding	-	CCDS16309.1	-	314	0	0.2	0.5	153.5	5	-4,-7	-	-	12	MINOR
ENSMUSG00000068815	Olfr1143	ENSMUST00000111568	ENSMUSP00000107194	TRANSLATION	protein_coding	-	-	5	310	0	0.2	5.2	153.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000075271	Ttc30a1	ENSMUST00000099994	ENSMUSP00000097574	TRANSLATION	protein_coding	-	CCDS16154.1	-	664	0	0.8	5.1	15	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074796	Slc4a11	ENSMUST00000144945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074796	Slc4a11	ENSMUST00000099362	ENSMUSP00000096963	TRANSLATION	protein_coding	-	CCDS38244.1	1	862	0	7.33	1.5	522.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074796	Slc4a11	ENSMUST00000127397	ENSMUSP00000117976	TRANSLATION	protein_coding	stop	-	3	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074796	Slc4a11	ENSMUST00000134647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074796	Slc4a11	ENSMUST00000138028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033486	Catsper2	ENSMUST00000123982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033486	Catsper2	ENSMUST00000038073	ENSMUSP00000037222	TRANSLATION	protein_coding	-	CCDS38216.1	1	588	0	4.12	0.5	114.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033486	Catsper2	ENSMUST00000146521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033486	Catsper2	ENSMUST00000154604	ENSMUSP00000119091	TRANSLATION	nonsense_mediated_decay	-	-	5	134	0	0.95	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026989	Dapl1	ENSMUST00000028369	ENSMUSP00000028369	TRANSLATION	protein_coding	-	CCDS16053.1	1	107	0	0	7.5	84.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000026989	Dapl1	ENSMUST00000144415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027331	Knstrn	ENSMUST00000126045	ENSMUSP00000122844	TRANSLATION	protein_coding	start/stop	-	2	218	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000177103	ENSMUSP00000134898	TRANSLATION	nonsense_mediated_decay	start	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000176463	ENSMUSP00000135549	TRANSLATION	nonsense_mediated_decay	start	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000028803	ENSMUSP00000028803	TRANSLATION	protein_coding	start	-	2	188	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000148877	ENSMUSP00000135008	TRANSLATION	nonsense_mediated_decay	start	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000134579	ENSMUSP00000123065	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000110842	ENSMUSP00000106466	TRANSLATION	protein_coding	-	-	3	234	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000027331	Knstrn	ENSMUST00000123104	ENSMUSP00000135422	TRANSLATION	nonsense_mediated_decay	start	-	5	186	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027331	Knstrn	ENSMUST00000134661	ENSMUSP00000115860	TRANSLATION	protein_coding	-	CCDS16585.1	1	312	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000063873	Slc24a3	ENSMUST00000081121	ENSMUSP00000079897	TRANSLATION	protein_coding	-	CCDS38256.1	5	595	5	2.389	1.7	199.9	7	-4,-5	-	-	17.292	PRINCIPAL:2
ENSMUSG00000063873	Slc24a3	ENSMUST00000137908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063873	Slc24a3	ENSMUST00000153249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063873	Slc24a3	ENSMUST00000110007	ENSMUSP00000105634	TRANSLATION	protein_coding	-	-	1	645	5	2.389	3.4	199.9	7	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000063873	Slc24a3	ENSMUST00000131123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068742	Cry2	ENSMUST00000144842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068742	Cry2	ENSMUST00000090559	ENSMUSP00000088047	TRANSLATION	protein_coding	-	CCDS16447.1	1	592	30	9.75	0.5	424.1	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000068742	Cry2	ENSMUST00000111278	ENSMUSP00000106909	TRANSLATION	protein_coding	-	CCDS16447.1	1	592	30	9.75	0.5	424.1	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000068742	Cry2	ENSMUST00000125488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016998	Svs4	ENSMUST00000017142	ENSMUSP00000017142	TRANSLATION	protein_coding	-	CCDS17029.1	1	113	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000027347	Rasgrp1	ENSMUST00000174770	ENSMUSP00000134167	TRANSLATION	nonsense_mediated_decay	-	-	5	481	5	9.5	0	204.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027347	Rasgrp1	ENSMUST00000102534	ENSMUSP00000099593	TRANSLATION	protein_coding	-	CCDS16572.1	5	795	17	14.16	6.3	259.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000027347	Rasgrp1	ENSMUST00000178884	ENSMUSP00000136423	TRANSLATION	protein_coding	-	-	1	795	17	14.16	6.3	259.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000027347	Rasgrp1	ENSMUST00000172901	ENSMUSP00000133449	TRANSLATION	protein_coding	-	-	5	597	17	11.83	1.2	257.9	0	-4,-7	-	-	13.324	MINOR
ENSMUSG00000027347	Rasgrp1	ENSMUST00000173541	ENSMUSP00000134027	TRANSLATION	protein_coding	-	-	5	760	17	13.16	2.4	257.9	0	-4,-7	-	-	16.44	MINOR
ENSMUSG00000027347	Rasgrp1	ENSMUST00000173252	ENSMUSP00000134592	TRANSLATION	protein_coding	-	-	5	546	12	10.83	0	234.9	0	-4,-7	-	-	7.194	MINOR
ENSMUSG00000027347	Rasgrp1	ENSMUST00000110898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053675	Tgm5	ENSMUST00000142674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053675	Tgm5	ENSMUST00000028721	ENSMUSP00000028721	TRANSLATION	protein_coding	-	CCDS16632.1	1	724	7	10.7	0.5	332.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000026874	Hc	ENSMUST00000156049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026874	Hc	ENSMUST00000125549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026874	Hc	ENSMUST00000151628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026874	Hc	ENSMUST00000028233	ENSMUSP00000028233	TRANSLATION	protein_coding	-	-	1	1680	5	38.41	0	656.7	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000026874	Hc	ENSMUST00000156412	ENSMUSP00000144345	TRANSLATION	protein_coding	start/stop	-	5	193	0	4.5	0	94.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000026934	Lhx3	ENSMUST00000149637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026934	Lhx3	ENSMUST00000127035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026934	Lhx3	ENSMUST00000028302	ENSMUSP00000028302	TRANSLATION	protein_coding	-	CCDS38081.1	1	402	16	3.6	7.5	184.8	0	-4,-5	-	-	20.598	PRINCIPAL:3
ENSMUSG00000026934	Lhx3	ENSMUST00000054099	ENSMUSP00000056822	TRANSLATION	protein_coding	-	CCDS71004.1	1	400	16	3.8	5.1	184.8	0	-4,-5	-	-	19.893	ALTERNATIVE:1
ENSMUSG00000041921	Metap1d	ENSMUST00000037210	ENSMUSP00000048190	TRANSLATION	protein_coding	-	CCDS16115.1	1	335	16	6.5	7.6	184.3	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000041921	Metap1d	ENSMUST00000138873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041921	Metap1d	ENSMUST00000139045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041921	Metap1d	ENSMUST00000123858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041921	Metap1d	ENSMUST00000148164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041921	Metap1d	ENSMUST00000124875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027610	Gss	ENSMUST00000079691	ENSMUSP00000078630	TRANSLATION	protein_coding	-	CCDS16951.1	1	474	31	12.75	8.8	544.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027610	Gss	ENSMUST00000130881	ENSMUSP00000135319	TRANSLATION	protein_coding	-	CCDS71167.1	1	405	31	11	1.7	488.4	0	-4,-5	-	-	11.424	MINOR
ENSMUSG00000027610	Gss	ENSMUST00000137305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027610	Gss	ENSMUST00000140860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027610	Gss	ENSMUST00000175993	ENSMUSP00000135392	TRANSLATION	protein_coding	start	-	5	216	19	5.5	0	249.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027610	Gss	ENSMUST00000126322	ENSMUSP00000117266	TRANSLATION	protein_coding	stop	-	5	200	12	5.75	0	201.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027610	Gss	ENSMUST00000155347	ENSMUSP00000122662	TRANSLATION	protein_coding	stop	-	3	179	9	4.75	0	173.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027610	Gss	ENSMUST00000176415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027610	Gss	ENSMUST00000157008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023224	Serping1	ENSMUST00000023994	ENSMUSP00000023994	TRANSLATION	protein_coding	-	CCDS16193.1	1	504	0	5.6	1.5	241.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000023224	Serping1	ENSMUST00000111641	ENSMUSP00000107268	TRANSLATION	protein_coding	-	-	5	347	0	3.6	0	126.9	0	3,-2	-	-	1.998	MINOR
ENSMUSG00000023224	Serping1	ENSMUST00000131456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027274	Mkks	ENSMUST00000028730	ENSMUSP00000028730	TRANSLATION	protein_coding	-	CCDS16794.1	1	570	0	1.96	1.5	355.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027274	Mkks	ENSMUST00000110089	ENSMUSP00000105716	TRANSLATION	protein_coding	-	CCDS16794.1	1	570	0	1.96	1.5	355.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027274	Mkks	ENSMUST00000144275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027011	Ube2e3	ENSMUST00000153266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027011	Ube2e3	ENSMUST00000138864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027011	Ube2e3	ENSMUST00000153614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027011	Ube2e3	ENSMUST00000028398	ENSMUSP00000028398	TRANSLATION	protein_coding	-	CCDS16167.1	1	207	0	4.6	15	157.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027011	Ube2e3	ENSMUST00000130914	ENSMUSP00000116644	TRANSLATION	protein_coding	stop	-	3	103	0	1.85	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027011	Ube2e3	ENSMUST00000124120	ENSMUSP00000121601	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027011	Ube2e3	ENSMUST00000121433	ENSMUSP00000113463	TRANSLATION	protein_coding	-	CCDS16167.1	5	207	0	4.6	15	157.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051424	Olfr1184	ENSMUST00000216675	ENSMUSP00000149649	TRANSLATION	protein_coding	-	CCDS16338.1	5	311	0	0.16	3.9	160.2	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000051424	Olfr1184	ENSMUST00000050038	ENSMUSP00000058679	TRANSLATION	protein_coding	-	CCDS16338.1	-	311	0	0.16	3.9	160.2	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027072	Prg3	ENSMUST00000028466	ENSMUSP00000028466	TRANSLATION	protein_coding	-	CCDS16199.1	1	222	0	2.66	1.5	42.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027072	Prg3	ENSMUST00000135939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048327	Ckap2l	ENSMUST00000052708	ENSMUSP00000056145	TRANSLATION	protein_coding	-	CCDS16724.1	1	745	0	0	0.5	155.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078881	Gm14434	ENSMUST00000122097	ENSMUSP00000112478	TRANSLATION	protein_coding	-	CCDS57197.1	5	498	59	2.05	0.5	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078881	Gm14434	ENSMUST00000120521	ENSMUSP00000113254	TRANSLATION	protein_coding	-	-	3	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000078881	Gm14434	ENSMUST00000120959	ENSMUSP00000113558	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000079051	Vinac1	ENSMUST00000145798	ENSMUSP00000123404	TRANSLATION	protein_coding	-	-	5	1413	0	2.68	0.5	196.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068452	Duox2	ENSMUST00000053734	ENSMUSP00000050314	TRANSLATION	protein_coding	-	-	2	1517	23	9.795	1.5	572.4	4	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000068452	Duox2	ENSMUST00000155820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068452	Duox2	ENSMUST00000237546	ENSMUSP00000158204	TRANSLATION	protein_coding	-	-	-	1545	21	9.795	0.5	572.4	4	2,-1	-	-	16.668	MINOR
ENSMUSG00000039041	Adrm1	ENSMUST00000152540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000152850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000145230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039041	Adrm1	ENSMUST00000147341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000147383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000128029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000155357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039041	Adrm1	ENSMUST00000061437	ENSMUSP00000050076	TRANSLATION	protein_coding	-	CCDS17171.1	1	407	0	8.5	8.4	229.2	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000027133	Nop10	ENSMUST00000028553	ENSMUSP00000028553	TRANSLATION	protein_coding	-	CCDS38198.1	1	64	0	1.5	19.5	84.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000074622	Mafb	ENSMUST00000099126	ENSMUSP00000096728	TRANSLATION	protein_coding	-	CCDS16994.1	-	323	0	0.6	6.3	196.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000026864	Hspa5	ENSMUST00000137145	ENSMUSP00000141966	TRANSLATION	nonsense_mediated_decay	-	-	5	42	2	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026864	Hspa5	ENSMUST00000129333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026864	Hspa5	ENSMUST00000145466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026864	Hspa5	ENSMUST00000028222	ENSMUSP00000028222	TRANSLATION	protein_coding	-	CCDS15950.1	1	655	19	8	6.3	903.4	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000026864	Hspa5	ENSMUST00000155595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026864	Hspa5	ENSMUST00000100171	ENSMUSP00000097747	TRANSLATION	protein_coding	-	CCDS15950.1	1	655	19	8	6.3	903.4	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000109547	Olfr1294	ENSMUST00000208675	ENSMUSP00000146438	TRANSLATION	protein_coding	-	CCDS16528.1	2	312	0	0.36	1.5	173.7	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109547	Olfr1294	ENSMUST00000208334	ENSMUSP00000146492	TRANSLATION	protein_coding	-	CCDS16528.1	-	312	0	0.36	1.5	173.7	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000002550	Uck1	ENSMUST00000142797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002550	Uck1	ENSMUST00000134351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002550	Uck1	ENSMUST00000138133	ENSMUSP00000125350	TRANSLATION	protein_coding	start	-	3	208	10	4.25	0	137.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002550	Uck1	ENSMUST00000133804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002550	Uck1	ENSMUST00000002625	ENSMUSP00000002625	TRANSLATION	protein_coding	-	CCDS15909.2	1	283	19	7.05	1.5	171.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026834	Acvr1c	ENSMUST00000100085	ENSMUSP00000097663	TRANSLATION	protein_coding	-	CCDS16049.1	1	363	22	6	1.7	161.5	0	-4,-5	-	-	11.999	MINOR
ENSMUSG00000026834	Acvr1c	ENSMUST00000112608	ENSMUSP00000108227	TRANSLATION	protein_coding	-	-	5	413	26	6	3.8	169.2	0	3,-2	-	-	15.825	MINOR
ENSMUSG00000026834	Acvr1c	ENSMUST00000028178	ENSMUSP00000028178	TRANSLATION	protein_coding	-	CCDS50586.1	1	493	26	6.6	4	201	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000026834	Acvr1c	ENSMUST00000154453	ENSMUSP00000119776	TRANSLATION	protein_coding	stop	-	5	61	2	0	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026834	Acvr1c	ENSMUST00000112607	ENSMUSP00000108226	TRANSLATION	protein_coding	-	-	5	336	17	5	0	112	0	3,-2	-	-	3.462	MINOR
ENSMUSG00000036449	Lcn8	ENSMUST00000038482	ENSMUSP00000043902	TRANSLATION	protein_coding	-	CCDS15786.1	1	175	0	2.428	0.5	58.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000052922	Bpi	ENSMUST00000109500	ENSMUSP00000105126	TRANSLATION	protein_coding	-	-	5	482	0	12.1	0.5	376.5	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052922	Bpi	ENSMUST00000109499	ENSMUSP00000105125	TRANSLATION	protein_coding	-	-	1	483	0	12.1	0.5	370.1	0	3,-2	-	-	11.616	ALTERNATIVE:2
ENSMUSG00000052922	Bpi	ENSMUST00000065039	ENSMUSP00000067837	TRANSLATION	protein_coding	-	CCDS16987.1	1	486	0	12.1	0.5	360.9	0	3,-2	-	-	11.064	PRINCIPAL:2
ENSMUSG00000057378	Ryr3	ENSMUST00000208135	ENSMUSP00000146719	TRANSLATION	protein_coding	start/stop	-	5	46	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057378	Ryr3	ENSMUST00000134358	ENSMUSP00000147196	TRANSLATION	protein_coding	-	-	5	4858	3	79.768	1.2	1912.4	0	-4,-5	-	-	13.367	MINOR
ENSMUSG00000057378	Ryr3	ENSMUST00000208574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000142537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000208290	ENSMUSP00000147250	TRANSLATION	protein_coding	-	CCDS50661.2	5	4868	3	80.618	2.9	1912.4	0	-4,-5	-	-	15.613	PRINCIPAL:2
ENSMUSG00000057378	Ryr3	ENSMUST00000156757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000146187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000207603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000091818	ENSMUSP00000089426	TRANSLATION	protein_coding	-	-	5	4888	3	80.09	0.5	1903.2	0	-4,-5	-	-	13.392	MINOR
ENSMUSG00000057378	Ryr3	ENSMUST00000128192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057378	Ryr3	ENSMUST00000208151	ENSMUSP00000146449	TRANSLATION	protein_coding	-	-	5	4834	3	80.618	0	1794.5	0	-4,-5	-	-	9	MINOR
ENSMUSG00000057378	Ryr3	ENSMUST00000080673	ENSMUSP00000079503	TRANSLATION	protein_coding	-	-	5	4863	3	80.618	4.1	1912.4	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000040282	BC052040	ENSMUST00000147968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040282	BC052040	ENSMUST00000166472	ENSMUSP00000126772	TRANSLATION	protein_coding	-	CCDS50662.1	1	287	0	0	3	166.4	0	-4,-6	-	-	6.034	MINOR
ENSMUSG00000040282	BC052040	ENSMUST00000110918	ENSMUSP00000106543	TRANSLATION	protein_coding	-	CCDS50663.1	1	281	0	0	12.8	177.1	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000026648	Dclre1c	ENSMUST00000061852	ENSMUSP00000054300	TRANSLATION	protein_coding	-	CCDS15649.1	1	603	6	5.41	0.5	73	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000026648	Dclre1c	ENSMUST00000132565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026648	Dclre1c	ENSMUST00000115066	ENSMUSP00000110718	TRANSLATION	protein_coding	-	CCDS79728.1	1	473	0	3.06	0.5	73	0	-4,0	-	-	7.302	MINOR
ENSMUSG00000026648	Dclre1c	ENSMUST00000129657	ENSMUSP00000116883	TRANSLATION	protein_coding	start/stop	-	5	227	0	1.32	0	65	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026648	Dclre1c	ENSMUST00000131433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026648	Dclre1c	ENSMUST00000152468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026648	Dclre1c	ENSMUST00000102988	ENSMUSP00000100053	TRANSLATION	protein_coding	-	CCDS15650.1	1	705	6	5.41	0.5	73	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000026648	Dclre1c	ENSMUST00000146027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026648	Dclre1c	ENSMUST00000100463	ENSMUSP00000098031	TRANSLATION	protein_coding	-	CCDS50486.1	1	486	6	5.41	0.5	73	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000016252	Atp5e	ENSMUST00000153132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016252	Atp5e	ENSMUST00000016396	ENSMUSP00000016396	TRANSLATION	protein_coding	-	CCDS38360.1	1	52	0	1.33	9.6	70.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000016252	Atp5e	ENSMUST00000149191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038860	Garnl3	ENSMUST00000124000	ENSMUSP00000123601	TRANSLATION	protein_coding	stop	-	5	150	0	0.1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038860	Garnl3	ENSMUST00000133135	ENSMUSP00000119973	TRANSLATION	protein_coding	stop	-	3	125	0	0.1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038860	Garnl3	ENSMUST00000148043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038860	Garnl3	ENSMUST00000139778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038860	Garnl3	ENSMUST00000127509	ENSMUSP00000141523	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038860	Garnl3	ENSMUST00000135296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038860	Garnl3	ENSMUST00000150242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038860	Garnl3	ENSMUST00000049618	ENSMUSP00000057582	TRANSLATION	protein_coding	-	-	1	997	0	6.571	1	450.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000038860	Garnl3	ENSMUST00000153717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038860	Garnl3	ENSMUST00000137381	ENSMUSP00000122576	TRANSLATION	protein_coding	-	-	1	1038	0	6.571	2.9	450.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000038860	Garnl3	ENSMUST00000193171	ENSMUSP00000142077	TRANSLATION	nonsense_mediated_decay	start	-	3	180	0	4.5	0	210.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038860	Garnl3	ENSMUST00000102810	ENSMUSP00000099874	TRANSLATION	protein_coding	-	CCDS15938.1	1	993	0	6.571	2.9	450.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032966	Fkbp1a	ENSMUST00000126670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032966	Fkbp1a	ENSMUST00000044011	ENSMUSP00000037206	TRANSLATION	protein_coding	-	CCDS16869.1	1	108	3	3	19.5	119	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000032966	Fkbp1a	ENSMUST00000148978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000142985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000137597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000143230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000132614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000142271	ENSMUSP00000118725	TRANSLATION	protein_coding	start	-	1	161	3	2.14	0	98.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032966	Fkbp1a	ENSMUST00000144171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032966	Fkbp1a	ENSMUST00000148295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074577	Ripor3	ENSMUST00000142702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074577	Ripor3	ENSMUST00000099073	ENSMUSP00000096672	TRANSLATION	protein_coding	-	CCDS38341.1	1	938	0	0	1.5	552.6	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000074577	Ripor3	ENSMUST00000123782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074577	Ripor3	ENSMUST00000131572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027439	Gzf1	ENSMUST00000028928	ENSMUSP00000028928	TRANSLATION	protein_coding	-	CCDS16841.1	1	706	40	3.64	1.5	247.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027439	Gzf1	ENSMUST00000131292	ENSMUSP00000121799	TRANSLATION	protein_coding	stop	-	2	146	0	0.64	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027439	Gzf1	ENSMUST00000151362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026922	Agpat2	ENSMUST00000028286	ENSMUSP00000028286	TRANSLATION	protein_coding	-	CCDS15809.1	1	278	2	0	2.7	117.1	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000026922	Agpat2	ENSMUST00000140386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026922	Agpat2	ENSMUST00000140508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026922	Agpat2	ENSMUST00000154753	ENSMUSP00000115059	TRANSLATION	protein_coding	stop	-	3	129	2	0	0	25.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026922	Agpat2	ENSMUST00000131940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089824	Rbm12	ENSMUST00000138068	ENSMUSP00000119519	TRANSLATION	protein_coding,RT	stop	-	5	133	0	0.6	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000089824	Rbm12	ENSMUST00000109604	ENSMUSP00000105233	TRANSLATION	protein_coding,RT	-	CCDS16961.1	1	992	0	1	0.5	84.4	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000089824	Rbm12	ENSMUST00000059647	ENSMUSP00000050461	TRANSLATION	protein_coding,RT	-	CCDS16961.1	1	992	0	1	0.5	84.4	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000089824	Rbm12	ENSMUST00000128499	ENSMUSP00000118067	TRANSLATION	protein_coding,RT	stop	-	5	143	0	0.6	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000089824	Rbm12	ENSMUST00000131377	ENSMUSP00000120731	TRANSLATION	protein_coding,RT	stop	-	5	288	0	0.6	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000051313	Olfr1262	ENSMUST00000111508	ENSMUSP00000107133	TRANSLATION	protein_coding	-	CCDS16401.1	2	304	0	0.7	1.5	145.7	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051313	Olfr1262	ENSMUST00000061701	ENSMUSP00000052387	TRANSLATION	protein_coding	-	CCDS16401.1	-	304	0	0.7	1.5	145.7	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051313	Olfr1262	ENSMUST00000213868	ENSMUSP00000150533	TRANSLATION	protein_coding	stop	-	2	116	0	0.4	0	44.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000051313	Olfr1262	ENSMUST00000131072	ENSMUSP00000121666	TRANSLATION	protein_coding	stop	-	3	94	0	0.4	0	33.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000059625	Sohlh1	ENSMUST00000076989	ENSMUSP00000076253	TRANSLATION	protein_coding	-	CCDS15793.1	1	357	0	0	1.5	22.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075068	Olfr140	ENSMUST00000099757	ENSMUSP00000097346	TRANSLATION	protein_coding	-	CCDS16405.1	-	302	0	0.2	3.9	160.3	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075068	Olfr140	ENSMUST00000111506	ENSMUSP00000107131	TRANSLATION	protein_coding	-	CCDS16405.1	2	302	0	0.2	3.9	160.3	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075068	Olfr140	ENSMUST00000216475	ENSMUSP00000150438	TRANSLATION	protein_coding	-	CCDS16405.1	5	302	0	0.2	3.9	160.3	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000075181	Olfr1066	ENSMUST00000099885	ENSMUSP00000097470	TRANSLATION	protein_coding	-	CCDS16257.1	-	313	0	0	0.5	169.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025780	Itih5	ENSMUST00000026886	ENSMUSP00000026886	TRANSLATION	protein_coding	-	CCDS15678.1	1	952	4	1.18	0.5	361.3	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000027257	Pacsin3	ENSMUST00000131711	ENSMUSP00000117214	TRANSLATION	protein_coding	stop	-	3	114	6	3.08	0	64.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000138470	ENSMUSP00000117230	TRANSLATION	protein_coding	stop	-	2	178	6	5.41	0	64.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000134699	ENSMUSP00000115046	TRANSLATION	protein_coding	stop	-	5	168	6	4.83	0	64.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000143883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027257	Pacsin3	ENSMUST00000111349	ENSMUSP00000106981	TRANSLATION	protein_coding	-	CCDS16429.1	1	424	6	11.41	7.6	118.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027257	Pacsin3	ENSMUST00000028694	ENSMUSP00000028694	TRANSLATION	protein_coding	-	CCDS16429.1	1	424	6	11.41	7.6	118.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027257	Pacsin3	ENSMUST00000168916	ENSMUSP00000129175	TRANSLATION	protein_coding	-	CCDS16429.1	1	424	6	11.41	7.6	118.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027257	Pacsin3	ENSMUST00000141313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027257	Pacsin3	ENSMUST00000059566	ENSMUSP00000054391	TRANSLATION	protein_coding	-	CCDS16429.1	1	424	6	11.41	7.6	118.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027257	Pacsin3	ENSMUST00000144394	ENSMUSP00000121297	TRANSLATION	protein_coding	stop	-	2	95	6	2.58	0	63.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000128684	ENSMUSP00000118915	TRANSLATION	protein_coding	start	-	3	133	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000124658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027257	Pacsin3	ENSMUST00000156919	ENSMUSP00000122779	TRANSLATION	protein_coding	stop	-	5	125	6	3.41	0	64.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027257	Pacsin3	ENSMUST00000126754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027257	Pacsin3	ENSMUST00000154959	ENSMUSP00000122769	TRANSLATION	protein_coding	stop	-	2	64	0	1.5	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095648	Gm2004	ENSMUST00000178872	ENSMUSP00000135992	TRANSLATION	protein_coding	start	-	1	63	0	1.45	1.5	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095648	Gm2004	ENSMUST00000179349	ENSMUSP00000136346	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000095648	Gm2004	ENSMUST00000109049	ENSMUSP00000104677	TRANSLATION	protein_coding	-	-	5	582	71	2.05	0	461.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026889	Rbm18	ENSMUST00000122456	ENSMUSP00000113204	TRANSLATION	protein_coding	-	-	1	100	0	0.8	0	0	0	-4,-5	-	-	1.176	MINOR
ENSMUSG00000026889	Rbm18	ENSMUST00000028251	ENSMUSP00000028251	TRANSLATION	protein_coding	-	CCDS15969.1	1	190	0	3.213	9.5	58.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026889	Rbm18	ENSMUST00000200733	ENSMUSP00000144089	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026889	Rbm18	ENSMUST00000134668	ENSMUSP00000117831	TRANSLATION	nonsense_mediated_decay	-	-	2	77	0	1.398	0	22.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026889	Rbm18	ENSMUST00000142809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042854	Trp53rkb	ENSMUST00000051923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042854	Trp53rkb	ENSMUST00000151826	ENSMUSP00000115353	TRANSLATION	protein_coding	-	CCDS17090.1	1	244	0	1.2	0.5	32.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042854	Trp53rkb	ENSMUST00000065753	ENSMUSP00000066907	TRANSLATION	protein_coding	-	-	1	144	0	0.6	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000026870	Cutal	ENSMUST00000028228	ENSMUSP00000144258	TRANSLATION	protein_coding	-	CCDS79783.1	1	111	0	2.05	0.5	50.6	1	-3,-5	-	-	6.756	MINOR
ENSMUSG00000026870	Cutal	ENSMUST00000184164	ENSMUSP00000144477	TRANSLATION	nonsense_mediated_decay	-	-	5	156	0	3.15	2.7	101.3	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000026870	Cutal	ENSMUST00000149250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026870	Cutal	ENSMUST00000047447	ENSMUSP00000038452	TRANSLATION	protein_coding	-	CCDS15954.1	1	156	0	3.15	2.7	101.3	1	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000026870	Cutal	ENSMUST00000113068	ENSMUSP00000108691	TRANSLATION	protein_coding	-	CCDS15954.1	1	156	0	3.15	2.7	101.3	1	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027247	Arhgap1	ENSMUST00000139314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027247	Arhgap1	ENSMUST00000149426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027247	Arhgap1	ENSMUST00000111330	ENSMUSP00000106962	TRANSLATION	protein_coding	-	CCDS16437.1	1	439	0	6.5	7.5	291.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027247	Arhgap1	ENSMUST00000111331	ENSMUSP00000106963	TRANSLATION	protein_coding	-	CCDS50641.1	1	479	0	6.5	0.5	291.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027247	Arhgap1	ENSMUST00000090614	ENSMUSP00000088105	TRANSLATION	protein_coding	-	CCDS16437.1	1	439	0	6.5	7.5	291.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027247	Arhgap1	ENSMUST00000141012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027247	Arhgap1	ENSMUST00000111329	ENSMUSP00000106961	TRANSLATION	protein_coding	-	CCDS16437.1	1	439	0	6.5	7.5	291.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027247	Arhgap1	ENSMUST00000154468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027247	Arhgap1	ENSMUST00000123702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059588	Calcrl	ENSMUST00000099944	ENSMUSP00000097527	TRANSLATION	protein_coding	-	CCDS16184.1	1	463	0	7.17	3.9	332.7	5	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000059588	Calcrl	ENSMUST00000074262	ENSMUSP00000073875	TRANSLATION	protein_coding	-	CCDS16184.1	1	463	0	7.17	3.9	332.7	5	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000059588	Calcrl	ENSMUST00000151295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002455	Prpf6	ENSMUST00000132714	ENSMUSP00000117711	TRANSLATION	protein_coding	stop	-	2	54	0	1.75	0	54	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002455	Prpf6	ENSMUST00000002529	ENSMUSP00000002529	TRANSLATION	protein_coding	-	CCDS38381.1	1	941	0	21.58	11.5	228.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000002455	Prpf6	ENSMUST00000139955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002455	Prpf6	ENSMUST00000136481	ENSMUSP00000121340	TRANSLATION	protein_coding	-	-	5	941	0	21.58	11.5	228.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000026740	Dnajc1	ENSMUST00000163130	ENSMUSP00000129176	TRANSLATION	nonsense_mediated_decay	start	-	5	79	0	1.4	0	59.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026740	Dnajc1	ENSMUST00000148401	ENSMUSP00000132289	TRANSLATION	protein_coding	start	-	3	58	0	1.75	0	32.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026740	Dnajc1	ENSMUST00000168723	ENSMUSP00000126716	TRANSLATION	protein_coding	start	-	5	357	0	3.65	0	35.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000026740	Dnajc1	ENSMUST00000166495	ENSMUSP00000126321	TRANSLATION	protein_coding	-	CCDS15709.1	1	552	0	5.63	0.5	113.9	1	1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000026740	Dnajc1	ENSMUST00000172210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026740	Dnajc1	ENSMUST00000028072	ENSMUSP00000028072	TRANSLATION	nonsense_mediated_decay	-	-	5	105	0	1.4	0	59.1	0	1,2	-	-	-1	MINOR
ENSMUSG00000026740	Dnajc1	ENSMUST00000153055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026740	Dnajc1	ENSMUST00000164835	ENSMUSP00000128687	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026740	Dnajc1	ENSMUST00000165793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026740	Dnajc1	ENSMUST00000091418	ENSMUSP00000088980	TRANSLATION	protein_coding	-	CCDS15709.1	1	552	0	5.63	0.5	113.9	1	1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000026740	Dnajc1	ENSMUST00000164606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075166	Olfr1104	ENSMUST00000215972	ENSMUSP00000149240	TRANSLATION	protein_coding	-	CCDS16276.1	5	310	0	0	7.6	159.5	5	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000075166	Olfr1104	ENSMUST00000099869	ENSMUSP00000097454	TRANSLATION	protein_coding	-	CCDS16276.1	-	310	0	0	7.6	159.5	5	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000075166	Olfr1104	ENSMUST00000214857	ENSMUSP00000150156	TRANSLATION	protein_coding	-	CCDS16276.1	5	310	0	0	7.6	159.5	5	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039834	Zfp335	ENSMUST00000041361	ENSMUSP00000038298	TRANSLATION	protein_coding	-	CCDS38331.1	1	1337	47	5.44	1.5	149.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039834	Zfp335	ENSMUST00000139247	ENSMUSP00000138664	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000039834	Zfp335	ENSMUST00000183830	ENSMUSP00000139133	TRANSLATION	nonsense_mediated_decay	-	-	1	598	16	2.28	0	70.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026904	Slc4a10	ENSMUST00000149527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026904	Slc4a10	ENSMUST00000156534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026904	Slc4a10	ENSMUST00000054484	ENSMUSP00000061411	TRANSLATION	protein_coding	-	CCDS57173.1	1	1106	0	11.91	3.9	1170.7	11	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000026904	Slc4a10	ENSMUST00000155219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026904	Slc4a10	ENSMUST00000112480	ENSMUSP00000108099	TRANSLATION	protein_coding	-	CCDS57172.1	1	1118	0	11.41	2.7	1170.6	11	-4,-5	-	-	11.578	MINOR
ENSMUSG00000026904	Slc4a10	ENSMUST00000102735	ENSMUSP00000099796	TRANSLATION	protein_coding	-	CCDS16064.1	1	1088	0	11.91	3.9	1170.7	11	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000026904	Slc4a10	ENSMUST00000147917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053164	Gpr21	ENSMUST00000159737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053164	Gpr21	ENSMUST00000065441	ENSMUSP00000066449	TRANSLATION	protein_coding	-	CCDS16004.1	1	349	0	0.48	12.8	129.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000005883	Spo11	ENSMUST00000109125	ENSMUSP00000104753	TRANSLATION	protein_coding	-	CCDS50812.1	1	358	0	6.11	5.3	170.5	0	-4,-5	-	-	13.032	MINOR
ENSMUSG00000005883	Spo11	ENSMUST00000144044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005883	Spo11	ENSMUST00000156471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005883	Spo11	ENSMUST00000109126	ENSMUSP00000104754	TRANSLATION	protein_coding	-	CCDS50811.1	1	371	0	6.23	0.5	161.5	0	-4,-5	-	-	10.746	MINOR
ENSMUSG00000005883	Spo11	ENSMUST00000050442	ENSMUSP00000059056	TRANSLATION	protein_coding	-	CCDS17137.1	1	396	0	6.51	7.5	173.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000015839	Nfe2l2	ENSMUST00000152371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015839	Nfe2l2	ENSMUST00000102672	ENSMUSP00000099733	TRANSLATION	protein_coding	-	CCDS16150.1	1	597	0	1.2	1.5	56.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040084	Bub1b	ENSMUST00000127356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040084	Bub1b	ENSMUST00000126013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040084	Bub1b	ENSMUST00000038341	ENSMUSP00000037126	TRANSLATION	protein_coding	-	CCDS16579.1	1	1052	0	20.45	1.5	146.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040084	Bub1b	ENSMUST00000130512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079353	Gm11099	ENSMUST00000112589	ENSMUSP00000108208	TRANSLATION	protein_coding	start/stop	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027489	Necab3	ENSMUST00000124382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027489	Necab3	ENSMUST00000109716	ENSMUSP00000105338	TRANSLATION	protein_coding	-	-	1	329	5	0	0	61.4	0	0,-3	-	-	10.85	ALTERNATIVE:2
ENSMUSG00000027489	Necab3	ENSMUST00000135530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027489	Necab3	ENSMUST00000149725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027489	Necab3	ENSMUST00000130824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027489	Necab3	ENSMUST00000125793	ENSMUSP00000117090	TRANSLATION	protein_coding	stop	-	5	168	3	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000027489	Necab3	ENSMUST00000000895	ENSMUSP00000000895	TRANSLATION	protein_coding	-	CCDS50766.1	1	353	5	0	1.5	63	0	0,-3	-	-	11	PRINCIPAL:2
ENSMUSG00000026971	Itgb6	ENSMUST00000147906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026971	Itgb6	ENSMUST00000145009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026971	Itgb6	ENSMUST00000133887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026971	Itgb6	ENSMUST00000059888	ENSMUSP00000054944	TRANSLATION	protein_coding	-	CCDS16060.1	1	787	11	14.3	7.5	549.4	1	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000026971	Itgb6	ENSMUST00000028348	ENSMUSP00000028348	TRANSLATION	protein_coding	-	CCDS16060.1	1	787	11	14.3	7.5	549.4	1	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000026971	Itgb6	ENSMUST00000112517	ENSMUSP00000108136	TRANSLATION	protein_coding	-	-	1	764	11	13.3	0	510.7	1	0,-3	-	-	13.68	MINOR
ENSMUSG00000026971	Itgb6	ENSMUST00000142696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026971	Itgb6	ENSMUST00000151035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026971	Itgb6	ENSMUST00000154764	ENSMUSP00000117815	TRANSLATION	protein_coding	stop	-	5	755	11	13.3	0	510.7	1	0,-3	-	-	-1	MINOR
ENSMUSG00000044916	1700029I15Rik	ENSMUST00000054316	ENSMUSP00000051464	TRANSLATION	protein_coding	-	CCDS16445.1	1	99	0	0	6.3	155.6	0	1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000044916	1700029I15Rik	ENSMUST00000189714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044916	1700029I15Rik	ENSMUST00000191292	ENSMUSP00000140421	TRANSLATION	nonsense_mediated_decay	-	-	1	35	0	0	0	35.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000044916	1700029I15Rik	ENSMUST00000111280	ENSMUSP00000106911	TRANSLATION	protein_coding	-	-	1	76	0	0	0	34.3	0	1,-3	-	-	0	MINOR
ENSMUSG00000070495	Ctcfl	ENSMUST00000094287	ENSMUSP00000091845	TRANSLATION	protein_coding	-	CCDS38349.1	5	636	40	5.44	0.5	72.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070495	Ctcfl	ENSMUST00000179693	ENSMUSP00000135932	TRANSLATION	protein_coding	-	CCDS38349.1	5	636	40	5.44	0.5	72.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075267	Pjvk	ENSMUST00000099986	ENSMUSP00000097566	TRANSLATION	protein_coding	-	CCDS38153.1	1	352	0	2.019	8.8	141	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000075267	Pjvk	ENSMUST00000153471	ENSMUSP00000114409	TRANSLATION	protein_coding	stop	-	3	73	0	0.42	0	47	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075267	Pjvk	ENSMUST00000144817	ENSMUSP00000119264	TRANSLATION	protein_coding	stop	-	3	190	0	1.353	0	110.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027067	Ssrp1	ENSMUST00000135414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000127069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000168266	ENSMUSP00000127058	TRANSLATION	protein_coding	-	CCDS38165.1	1	708	0	8.73	2.7	275.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027067	Ssrp1	ENSMUST00000077798	ENSMUSP00000076971	TRANSLATION	protein_coding	-	CCDS38165.1	1	708	0	8.73	2.7	275.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027067	Ssrp1	ENSMUST00000145097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000123467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000142359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000146530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027067	Ssrp1	ENSMUST00000130729	ENSMUSP00000121639	TRANSLATION	protein_coding	stop	-	1	623	0	8.53	0	275.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037771	Slc32a1	ENSMUST00000045738	ENSMUSP00000036299	TRANSLATION	protein_coding	-	CCDS38309.1	1	525	0	0	7.5	331	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000068806	Olfr1259	ENSMUST00000214846	ENSMUSP00000149652	TRANSLATION	protein_coding	-	CCDS16398.1	3	309	0	0.36	8.8	151.7	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000068806	Olfr1259	ENSMUST00000090695	ENSMUSP00000088194	TRANSLATION	protein_coding	-	CCDS16398.1	-	309	0	0.36	8.8	151.7	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000017697	Ada	ENSMUST00000017841	ENSMUSP00000017841	TRANSLATION	protein_coding	-	CCDS17015.1	1	352	6	9.33	1.5	366.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017697	Ada	ENSMUST00000156939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057147	Dph6	ENSMUST00000055144	ENSMUSP00000060730	TRANSLATION	protein_coding	-	-	1	271	9	3.855	0	154.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000057147	Dph6	ENSMUST00000028640	ENSMUSP00000028640	TRANSLATION	protein_coding	-	-	1	225	9	2.585	0	102	0	-4,-5	-	-	12.318	MINOR
ENSMUSG00000057147	Dph6	ENSMUST00000138975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057147	Dph6	ENSMUST00000150447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057147	Dph6	ENSMUST00000138106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057147	Dph6	ENSMUST00000102542	ENSMUSP00000099601	TRANSLATION	protein_coding	-	CCDS16567.1	1	267	9	3.855	6.3	154.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040093	Bmf	ENSMUST00000143583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040093	Bmf	ENSMUST00000154521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040093	Bmf	ENSMUST00000152123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040093	Bmf	ENSMUST00000146962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040093	Bmf	ENSMUST00000090219	ENSMUSP00000087686	TRANSLATION	protein_coding	-	CCDS16578.1	1	271	0	0	1.5	223.6	0	-2,2	-	-	6.228	MINOR
ENSMUSG00000040093	Bmf	ENSMUST00000125860	ENSMUSP00000159051	TRANSLATION	protein_coding	-	-	2	185	0	0	7.6	223.4	0	-4,-5	-	-	8.988	PRINCIPAL:1
ENSMUSG00000040093	Bmf	ENSMUST00000138342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040093	Bmf	ENSMUST00000110859	ENSMUSP00000106483	TRANSLATION	protein_coding	-	CCDS79835.1	1	190	0	0	0.5	223.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000056995	Olfr1178	ENSMUST00000217346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056995	Olfr1178	ENSMUST00000075640	ENSMUSP00000075066	TRANSLATION	protein_coding	-	CCDS16332.1	-	323	0	0.36	1.5	166.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056995	Olfr1178	ENSMUST00000214040	ENSMUSP00000150036	TRANSLATION	protein_coding	-	CCDS16332.1	5	323	0	0.36	1.5	166.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056995	Olfr1178	ENSMUST00000219086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064329	Scn1a	ENSMUST00000129508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064329	Scn1a	ENSMUST00000077489	ENSMUSP00000076697	TRANSLATION	protein_coding	-	CCDS38131.1	5	1998	0	17.22	8.8	1367.1	22	-4,-5	-	-	13.698	PRINCIPAL:3
ENSMUSG00000064329	Scn1a	ENSMUST00000138910	ENSMUSP00000116881	TRANSLATION	protein_coding	stop	-	5	500	0	7.37	0	278.4	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000064329	Scn1a	ENSMUST00000094951	ENSMUSP00000092558	TRANSLATION	protein_coding	-	-	5	1981	0	17.22	4.8	1318.9	22	-4,-5	-	-	9.267	MINOR
ENSMUSG00000064329	Scn1a	ENSMUST00000112371	ENSMUSP00000107990	TRANSLATION	protein_coding	-	-	5	1998	0	15.42	8.8	1367.1	22	-4,-5	-	-	10.098	MINOR
ENSMUSG00000064329	Scn1a	ENSMUST00000112366	ENSMUSP00000107985	TRANSLATION	protein_coding	-	CCDS84530.1	5	2009	0	17.22	7.6	1388.8	22	-4,-5	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000064329	Scn1a	ENSMUST00000156865	ENSMUSP00000144633	TRANSLATION	protein_coding	start	-	1	502	0	7.852	0	390	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000064329	Scn1a	ENSMUST00000200839	ENSMUSP00000144214	TRANSLATION	nonsense_mediated_decay	start	-	5	303	0	3.74	0	242.3	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000100642	Gm28230	ENSMUST00000053932	ENSMUSP00000051355	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	144	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000075028	Prdm11	ENSMUST00000147339	ENSMUSP00000122809	TRANSLATION	protein_coding	stop	-	2	162	4	1.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075028	Prdm11	ENSMUST00000238863	ENSMUSP00000158933	TRANSLATION	protein_coding	-	-	-	1172	4	3.766	1	23.1	0	-4,-5	-	-	11.884	MINOR
ENSMUSG00000075028	Prdm11	ENSMUST00000178666	ENSMUSP00000136795	TRANSLATION	protein_coding	-	CCDS50647.1	5	565	4	3.766	0.5	23.1	0	-4,-5	-	-	11.884	MINOR
ENSMUSG00000075028	Prdm11	ENSMUST00000111274	ENSMUSP00000106905	TRANSLATION	protein_coding	-	CCDS50647.1	5	565	4	3.766	0.5	23.1	0	-4,-5	-	-	11.884	MINOR
ENSMUSG00000075028	Prdm11	ENSMUST00000111272	ENSMUSP00000106903	TRANSLATION	protein_coding	-	-	5	461	4	2.5	0	73.5	0	-4,-5	-	-	13.468	PRINCIPAL:1
ENSMUSG00000075028	Prdm11	ENSMUST00000130441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061525	4921509C19Rik	ENSMUST00000080132	ENSMUSP00000079030	TRANSLATION	protein_coding	-	CCDS38271.1	1	640	18	0.6	0.5	232.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078870	Gm14410	ENSMUST00000156269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078870	Gm14410	ENSMUST00000133301	ENSMUSP00000114668	TRANSLATION	protein_coding	-	-	3	370	39	2.25	0	293	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078870	Gm14410	ENSMUST00000108964	ENSMUSP00000104592	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	76.4	0	-4,-5	-	-	3.864	MINOR
ENSMUSG00000009621	Vav2	ENSMUST00000146843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009621	Vav2	ENSMUST00000135584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009621	Vav2	ENSMUST00000132642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009621	Vav2	ENSMUST00000056176	ENSMUSP00000062782	TRANSLATION	protein_coding	-	CCDS15827.1	1	868	8	21.984	8.3	454.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000009621	Vav2	ENSMUST00000185188	ENSMUSP00000138964	TRANSLATION	nonsense_mediated_decay	-	-	1	829	8	17.864	0	354.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009621	Vav2	ENSMUST00000148067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009621	Vav2	ENSMUST00000149758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018459	Slc13a3	ENSMUST00000143136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018459	Slc13a3	ENSMUST00000029208	ENSMUSP00000029208	TRANSLATION	protein_coding	-	CCDS17081.1	1	600	0	2.8	0.5	360.9	10	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000018459	Slc13a3	ENSMUST00000109279	ENSMUSP00000104902	TRANSLATION	protein_coding	-	-	1	558	0	2.8	0	329.7	9	4,-1	-	-	10.128	MINOR
ENSMUSG00000018459	Slc13a3	ENSMUST00000147107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018459	Slc13a3	ENSMUST00000145513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084897	Gm14226	ENSMUST00000130870	ENSMUSP00000122157	TRANSLATION	protein_coding	-	-	1	686	0	0.16	0.5	0	0	2,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000025783	4930412O13Rik	ENSMUST00000114919	ENSMUSP00000110569	TRANSLATION	protein_coding	-	-	2	102	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000025783	4930412O13Rik	ENSMUST00000026889	ENSMUSP00000026889	TRANSLATION	protein_coding	-	-	1	106	0	0	0	0	0	-4,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000081234	Olfr1120	ENSMUST00000058737	ENSMUSP00000051931	TRANSLATION	protein_coding	-	CCDS16287.1	-	314	0	0.16	4	184.1	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000081234	Olfr1120	ENSMUST00000215163	ENSMUSP00000149911	TRANSLATION	protein_coding	-	CCDS16287.1	2	314	0	0.16	4	184.1	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000039046	Usp6nl	ENSMUST00000114937	ENSMUSP00000110587	TRANSLATION	protein_coding	-	CCDS38043.1	1	819	0	5.4	1.5	183.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039046	Usp6nl	ENSMUST00000150515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039046	Usp6nl	ENSMUST00000042503	ENSMUSP00000043178	TRANSLATION	protein_coding	-	CCDS38044.1	1	842	0	5.4	0.5	183.1	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000039046	Usp6nl	ENSMUST00000132391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026805	Barhl1	ENSMUST00000113847	ENSMUSP00000109478	TRANSLATION	protein_coding	-	CCDS15849.1	1	327	0	1.2	8.8	77.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026805	Barhl1	ENSMUST00000124059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026805	Barhl1	ENSMUST00000113849	ENSMUSP00000109480	TRANSLATION	protein_coding	-	CCDS15849.1	1	327	0	1.2	8.8	77.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026805	Barhl1	ENSMUST00000174027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026805	Barhl1	ENSMUST00000050776	ENSMUSP00000053147	TRANSLATION	protein_coding	-	CCDS15849.1	1	327	0	1.2	8.8	77.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079466	Prdm12	ENSMUST00000113470	ENSMUSP00000109098	TRANSLATION	protein_coding	-	CCDS50562.1	5	365	3	4.2	1.5	45.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027540	Ptpn1	ENSMUST00000126839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027540	Ptpn1	ENSMUST00000142717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027540	Ptpn1	ENSMUST00000151705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027540	Ptpn1	ENSMUST00000124039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027540	Ptpn1	ENSMUST00000029053	ENSMUSP00000029053	TRANSLATION	protein_coding	-	CCDS17107.1	1	432	11	7.75	1.5	263.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027540	Ptpn1	ENSMUST00000147210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027540	Ptpn1	ENSMUST00000144249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026735	Ptf1a	ENSMUST00000028068	ENSMUSP00000028068	TRANSLATION	protein_coding	-	CCDS15715.1	1	324	0	0.2	1.5	66.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027297	Ltk	ENSMUST00000028759	ENSMUSP00000028759	TRANSLATION	protein_coding	-	CCDS16608.1	1	888	18	8.51	0.5	295.1	3	0,-3	-	-	18	PRINCIPAL:4
ENSMUSG00000027297	Ltk	ENSMUST00000134295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027297	Ltk	ENSMUST00000082130	ENSMUSP00000080774	TRANSLATION	protein_coding	-	CCDS16609.1	1	827	18	8.51	0.5	295.1	3	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000027297	Ltk	ENSMUST00000182203	ENSMUSP00000138201	TRANSLATION	protein_coding	start	CCDS50674.1	1	576	18	8.51	1.5	295.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027297	Ltk	ENSMUST00000140224	ENSMUSP00000123020	TRANSLATION	protein_coding	-	-	1	476	18	8.51	0	295.1	3	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000027297	Ltk	ENSMUST00000127470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027613	Eif6	ENSMUST00000109638	ENSMUSP00000105266	TRANSLATION	protein_coding	-	-	1	81	0	1.96	0	56.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027613	Eif6	ENSMUST00000154841	ENSMUSP00000115715	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027613	Eif6	ENSMUST00000138962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027613	Eif6	ENSMUST00000134278	ENSMUSP00000123190	TRANSLATION	protein_coding	stop	-	2	58	0	1	0	75.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027613	Eif6	ENSMUST00000129830	ENSMUSP00000120206	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	2.014	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027613	Eif6	ENSMUST00000029142	ENSMUSP00000029142	TRANSLATION	protein_coding	-	CCDS16956.1	1	245	0	5.58	19.5	267.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027613	Eif6	ENSMUST00000134811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039715	Wdr34	ENSMUST00000146275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039715	Wdr34	ENSMUST00000143892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039715	Wdr34	ENSMUST00000113711	ENSMUSP00000109340	TRANSLATION	protein_coding	-	CCDS15865.2	1	537	0	2.76	1.5	26.7	0	-1,3	-	-	12	PRINCIPAL:1
ENSMUSG00000039715	Wdr34	ENSMUST00000139145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034903	Cobll1	ENSMUST00000155916	ENSMUSP00000115065	TRANSLATION	protein_coding	stop	-	5	346	0	1.33	0	150.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034903	Cobll1	ENSMUST00000132979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034903	Cobll1	ENSMUST00000132478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034903	Cobll1	ENSMUST00000112431	ENSMUSP00000108050	TRANSLATION	protein_coding	-	-	1	1241	0	1.33	0.5	153.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034903	Cobll1	ENSMUST00000136537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034903	Cobll1	ENSMUST00000102726	ENSMUSP00000099787	TRANSLATION	protein_coding	-	CCDS16072.1	1	1240	0	1.33	0.5	153.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000034903	Cobll1	ENSMUST00000156643	ENSMUSP00000114447	TRANSLATION	protein_coding	stop	-	5	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034903	Cobll1	ENSMUST00000155082	ENSMUSP00000116196	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034903	Cobll1	ENSMUST00000090896	ENSMUSP00000088412	TRANSLATION	protein_coding	-	CCDS50595.1	1	1203	0	1.33	0.5	153.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034903	Cobll1	ENSMUST00000124769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034903	Cobll1	ENSMUST00000112429	ENSMUSP00000108048	TRANSLATION	protein_coding	-	-	5	1241	0	1.33	0.5	153.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034903	Cobll1	ENSMUST00000155768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034903	Cobll1	ENSMUST00000112430	ENSMUSP00000108049	TRANSLATION	protein_coding	-	-	1	1202	0	1.33	0.5	153.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000038705	Gmeb2	ENSMUST00000130475	ENSMUSP00000116479	TRANSLATION	protein_coding	stop	-	5	215	4	3	0	83	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038705	Gmeb2	ENSMUST00000049032	ENSMUSP00000037075	TRANSLATION	protein_coding	-	CCDS17206.1	1	530	4	3	5.2	83	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038705	Gmeb2	ENSMUST00000141003	ENSMUSP00000116854	TRANSLATION	nonsense_mediated_decay	-	-	5	127	1	1	0	28.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038705	Gmeb2	ENSMUST00000141110	ENSMUSP00000115853	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038705	Gmeb2	ENSMUST00000123148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038705	Gmeb2	ENSMUST00000147665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002102	Psmc3	ENSMUST00000002171	ENSMUSP00000002171	TRANSLATION	protein_coding	-	-	1	451	13	10.63	0	142.1	0	-4,-5	-	-	16.602	MINOR
ENSMUSG00000002102	Psmc3	ENSMUST00000151419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002102	Psmc3	ENSMUST00000141462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002102	Psmc3	ENSMUST00000111441	ENSMUSP00000107068	TRANSLATION	protein_coding	-	-	5	400	13	10.33	0	142.1	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000002102	Psmc3	ENSMUST00000145317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002102	Psmc3	ENSMUST00000185715	ENSMUSP00000139782	TRANSLATION	protein_coding	stop	-	3	305	10	8.08	0	100	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002102	Psmc3	ENSMUST00000067663	ENSMUSP00000071054	TRANSLATION	protein_coding	-	CCDS16423.1	1	442	13	11.33	6.3	142.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002102	Psmc3	ENSMUST00000131473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002102	Psmc3	ENSMUST00000152269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002102	Psmc3	ENSMUST00000146506	ENSMUSP00000121688	TRANSLATION	nonsense_mediated_decay	start	-	3	203	3	4.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068040	Tm9sf4	ENSMUST00000152807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068040	Tm9sf4	ENSMUST00000145010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068040	Tm9sf4	ENSMUST00000146477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068040	Tm9sf4	ENSMUST00000147978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068040	Tm9sf4	ENSMUST00000137446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068040	Tm9sf4	ENSMUST00000149390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068040	Tm9sf4	ENSMUST00000089027	ENSMUSP00000086422	TRANSLATION	protein_coding	-	CCDS16906.1	1	643	0	0	7.5	684.1	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000068040	Tm9sf4	ENSMUST00000140988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068040	Tm9sf4	ENSMUST00000134922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068040	Tm9sf4	ENSMUST00000141220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015335	Zdhhc12	ENSMUST00000148717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015335	Zdhhc12	ENSMUST00000102865	ENSMUSP00000099929	TRANSLATION	protein_coding	-	CCDS15868.1	1	267	6	0	6.3	112.1	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015335	Zdhhc12	ENSMUST00000081838	ENSMUSP00000080521	TRANSLATION	protein_coding	-	CCDS15869.1	1	281	6	0	0.5	112.1	4	-4,-5	-	-	12	MINOR
ENSMUSG00000015335	Zdhhc12	ENSMUST00000137001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026882	4930568D16Rik	ENSMUST00000028243	ENSMUSP00000028243	TRANSLATION	protein_coding	-	CCDS50575.1	1	319	6	2.95	1.5	328.2	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000075377	Olfr362	ENSMUST00000100144	ENSMUSP00000097722	TRANSLATION	protein_coding	-	CCDS15994.1	-	317	0	0.36	6.3	168.6	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075377	Olfr362	ENSMUST00000215927	ENSMUSP00000150819	TRANSLATION	protein_coding	-	CCDS15994.1	3	317	0	0.36	6.3	168.6	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075377	Olfr362	ENSMUST00000213817	ENSMUSP00000150852	TRANSLATION	protein_coding	-	CCDS15994.1	5	317	0	0.36	6.3	168.6	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000079008	Gm14124	ENSMUST00000109922	ENSMUSP00000105548	TRANSLATION	protein_coding	-	CCDS50739.1	3	715	86	2	0.5	471.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027080	Med19	ENSMUST00000141595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027080	Med19	ENSMUST00000102645	ENSMUSP00000099705	TRANSLATION	protein_coding	-	CCDS16189.1	1	244	0	0	2.7	280.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027346	Gpcpd1	ENSMUST00000127712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027346	Gpcpd1	ENSMUST00000060955	ENSMUSP00000062221	TRANSLATION	protein_coding	-	CCDS38246.1	1	675	8	6.79	7.5	256.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000027346	Gpcpd1	ENSMUST00000145694	ENSMUSP00000116457	TRANSLATION	nonsense_mediated_decay	-	-	1	117	0	3.5	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000110135	ENSMUSP00000105762	TRANSLATION	protein_coding	stop	-	3	157	0	3.7	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000124107	ENSMUSP00000122751	TRANSLATION	protein_coding	stop	-	2	188	0	3.7	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000110142	ENSMUSP00000105769	TRANSLATION	protein_coding	-	CCDS38246.1	5	675	8	6.79	7.5	256.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000027346	Gpcpd1	ENSMUST00000140867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027346	Gpcpd1	ENSMUST00000110136	ENSMUSP00000105763	TRANSLATION	protein_coding	-	CCDS71151.1	1	491	8	3.09	1.7	206.5	0	-4,-5	-	-	9.324	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000124632	ENSMUSP00000117217	TRANSLATION	nonsense_mediated_decay	start	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000028822	ENSMUSP00000028822	TRANSLATION	protein_coding	-	-	5	444	8	3.19	0	206.1	0	-4,-5	-	-	8.976	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000148833	ENSMUSP00000116156	TRANSLATION	nonsense_mediated_decay	-	-	1	102	0	2.25	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000149854	ENSMUSP00000116949	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	2.25	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027346	Gpcpd1	ENSMUST00000131617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027173	Depdc7	ENSMUST00000144133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027173	Depdc7	ENSMUST00000028595	ENSMUSP00000028595	TRANSLATION	protein_coding	-	CCDS16492.1	1	511	0	0.48	7.5	67	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000013338	Fer1l4	ENSMUST00000109611	ENSMUSP00000105240	TRANSLATION	protein_coding	-	-	5	1994	3	4.31	0.5	572.4	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000013338	Fer1l4	ENSMUST00000132912	ENSMUSP00000123091	TRANSLATION	protein_coding	start/stop	-	5	140	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013338	Fer1l4	ENSMUST00000130764	ENSMUSP00000114324	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013338	Fer1l4	ENSMUST00000150144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013338	Fer1l4	ENSMUST00000138297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013338	Fer1l4	ENSMUST00000150538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026958	Dpp7	ENSMUST00000028332	ENSMUSP00000028332	TRANSLATION	protein_coding	-	CCDS15766.1	1	506	2	11	0.5	291.4	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000026958	Dpp7	ENSMUST00000131665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000135473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000139971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000133253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000125248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000139108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000149953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000144218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026958	Dpp7	ENSMUST00000150305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075196	Olfr1047	ENSMUST00000216056	ENSMUSP00000150247	TRANSLATION	protein_coding	-	CCDS16246.1	5	319	0	0.42	1.5	172.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075196	Olfr1047	ENSMUST00000099901	ENSMUSP00000097485	TRANSLATION	protein_coding	-	CCDS16246.1	-	319	0	0.42	1.5	172.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000008200	Fnbp4	ENSMUST00000141672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000238890	ENSMUSP00000159108	TRANSLATION	protein_coding	-	-	-	1030	0	0	0	76.9	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000008200	Fnbp4	ENSMUST00000142631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000152794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000123314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000145747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000126829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000123955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000135592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008200	Fnbp4	ENSMUST00000013759	ENSMUSP00000013759	TRANSLATION	protein_coding	-	CCDS16414.1	1	1077	0	0	0.5	76.9	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000027482	Bpifa3	ENSMUST00000109746	ENSMUSP00000105368	TRANSLATION	protein_coding	-	CCDS71163.1	1	232	0	2.42	0.5	114.8	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027482	Bpifa3	ENSMUST00000125753	ENSMUSP00000135866	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	0.75	0	56.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027482	Bpifa3	ENSMUST00000028984	ENSMUSP00000028984	TRANSLATION	protein_coding	-	CCDS16924.1	1	239	0	2.42	0.5	114.8	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000027643	Ghrh	ENSMUST00000126630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027643	Ghrh	ENSMUST00000029172	ENSMUSP00000029172	TRANSLATION	protein_coding	-	CCDS16976.1	1	103	0	1.4	1.5	45.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027643	Ghrh	ENSMUST00000109536	ENSMUSP00000105162	TRANSLATION	protein_coding	-	CCDS16976.1	1	103	0	1.4	1.5	45.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000080713	Olfr1174	ENSMUST00000214955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000080713	Olfr1174	ENSMUST00000213348	ENSMUSP00000153754	TRANSLATION	protein_coding	-	-	5	320	0	0	0.5	161.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032869	Psmf1	ENSMUST00000125977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032869	Psmf1	ENSMUST00000155939	ENSMUSP00000117723	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	1	0	24.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032869	Psmf1	ENSMUST00000123449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032869	Psmf1	ENSMUST00000109869	ENSMUSP00000105495	TRANSLATION	protein_coding	-	CCDS16872.1	5	271	0	3.75	7.6	96.3	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000032869	Psmf1	ENSMUST00000151656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032869	Psmf1	ENSMUST00000042452	ENSMUSP00000041184	TRANSLATION	protein_coding	-	CCDS16872.1	1	271	0	3.75	7.6	96.3	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027315	Spint1	ENSMUST00000110816	ENSMUSP00000106440	TRANSLATION	protein_coding	-	CCDS16597.1	5	507	5	7.33	1.5	245.4	1	3,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000027315	Spint1	ENSMUST00000139903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027315	Spint1	ENSMUST00000134872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027315	Spint1	ENSMUST00000028783	ENSMUSP00000028783	TRANSLATION	protein_coding	-	CCDS16597.1	1	507	5	7.33	1.5	245.4	1	3,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000027315	Spint1	ENSMUST00000110817	ENSMUSP00000106441	TRANSLATION	protein_coding	-	CCDS16597.1	1	507	5	7.33	1.5	245.4	1	3,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000005506	Celf1	ENSMUST00000068747	ENSMUSP00000070438	TRANSLATION	protein_coding	-	CCDS16421.1	1	486	0	7.2	6.5	171.6	0	-4,-5	-	-	14.538	PRINCIPAL:3
ENSMUSG00000005506	Celf1	ENSMUST00000177642	ENSMUSP00000136109	TRANSLATION	protein_coding	-	CCDS16421.1	1	486	0	7.2	6.5	171.6	0	-4,-5	-	-	14.538	PRINCIPAL:3
ENSMUSG00000005506	Celf1	ENSMUST00000111451	ENSMUSP00000107078	TRANSLATION	protein_coding	-	CCDS16421.1	5	486	0	7.2	6.5	171.6	0	-4,-5	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000005506	Celf1	ENSMUST00000127385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005506	Celf1	ENSMUST00000133657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005506	Celf1	ENSMUST00000005643	ENSMUSP00000005643	TRANSLATION	protein_coding	-	CCDS16420.1	5	513	0	7.2	7.5	171.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000005506	Celf1	ENSMUST00000068726	ENSMUSP00000064323	TRANSLATION	protein_coding	-	-	1	487	0	7.2	5.1	171.6	0	-4,-5	-	-	13.893	MINOR
ENSMUSG00000005506	Celf1	ENSMUST00000111455	ENSMUSP00000107082	TRANSLATION	protein_coding	-	CCDS16420.1	5	513	0	7.2	7.5	171.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000005506	Celf1	ENSMUST00000150546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005506	Celf1	ENSMUST00000111449	ENSMUSP00000107076	TRANSLATION	protein_coding	-	CCDS16421.1	1	486	0	7.2	6.5	171.6	0	-4,-5	-	-	14.538	PRINCIPAL:3
ENSMUSG00000005506	Celf1	ENSMUST00000154442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005506	Celf1	ENSMUST00000111448	ENSMUSP00000107075	TRANSLATION	protein_coding	-	-	5	483	0	7.2	3.9	171.6	0	-4,-5	-	-	13.338	MINOR
ENSMUSG00000005506	Celf1	ENSMUST00000111452	ENSMUSP00000107079	TRANSLATION	protein_coding	-	CCDS16420.1	5	513	0	7.2	7.5	171.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000005506	Celf1	ENSMUST00000127580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026961	Lrrc26	ENSMUST00000028337	ENSMUSP00000028337	TRANSLATION	protein_coding	-	CCDS15763.1	1	331	0	0.96	0.5	62	0	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000059555	Tor4a	ENSMUST00000142857	ENSMUSP00000142048	TRANSLATION	protein_coding	stop	-	3	111	7	0	0	36.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000059555	Tor4a	ENSMUST00000137920	ENSMUSP00000141641	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059555	Tor4a	ENSMUST00000081869	ENSMUSP00000080548	TRANSLATION	protein_coding	-	CCDS15750.1	1	426	12	0.78	0.5	48.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000034810	Scn7a	ENSMUST00000042792	ENSMUSP00000042405	TRANSLATION	protein_coding	-	CCDS16081.1	1	1681	3	6.62	0.5	663.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037482	Erv3	ENSMUST00000040941	ENSMUSP00000047030	TRANSLATION	protein_coding	-	CCDS50726.1	1	200	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000075193	Olfr1051	ENSMUST00000217294	ENSMUSP00000150061	TRANSLATION	protein_coding	-	CCDS16249.1	5	308	0	0.36	3.9	180.2	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000075193	Olfr1051	ENSMUST00000099898	ENSMUSP00000097482	TRANSLATION	protein_coding	-	CCDS16249.1	-	308	0	0.36	3.9	180.2	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000075193	Olfr1051	ENSMUST00000216432	ENSMUSP00000149318	TRANSLATION	protein_coding	-	CCDS16249.1	5	308	0	0.36	3.9	180.2	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000075193	Olfr1051	ENSMUST00000217245	ENSMUSP00000150857	TRANSLATION	protein_coding	-	CCDS16249.1	5	308	0	0.36	3.9	180.2	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000075209	Olfr1016	ENSMUST00000099915	ENSMUSP00000097499	TRANSLATION	protein_coding	-	CCDS16221.1	-	309	0	0.28	6.4	169.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075209	Olfr1016	ENSMUST00000217410	ENSMUSP00000149631	TRANSLATION	protein_coding	-	CCDS16221.1	3	309	0	0.28	6.4	169.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075209	Olfr1016	ENSMUST00000216425	ENSMUSP00000150747	TRANSLATION	protein_coding	-	CCDS16221.1	3	309	0	0.28	6.4	169.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049372	Olfr1183	ENSMUST00000102618	ENSMUSP00000099678	TRANSLATION	protein_coding	-	CCDS16337.1	-	303	0	0.56	5.1	161.3	6	-4,-7	-	-	11.018	PRINCIPAL:2
ENSMUSG00000049372	Olfr1183	ENSMUST00000213115	ENSMUSP00000154094	TRANSLATION	protein_coding	-	-	5	322	0	0.68	0	193.4	6	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000049372	Olfr1183	ENSMUST00000219871	ENSMUSP00000151738	TRANSLATION	protein_coding	-	CCDS16337.1	5	303	0	0.56	5.1	161.3	6	-4,-7	-	-	11.018	PRINCIPAL:2
ENSMUSG00000109865	Hspa14	ENSMUST00000156008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109865	Hspa14	ENSMUST00000027961	ENSMUSP00000027961	TRANSLATION	protein_coding	-	CCDS15653.1	1	509	20	10.35	2.7	373.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000109865	Hspa14	ENSMUST00000135157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109865	Hspa14	ENSMUST00000148167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109865	Hspa14	ENSMUST00000139485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109865	Hspa14	ENSMUST00000129505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000146803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000111083	ENSMUSP00000106712	TRANSLATION	protein_coding	-	CCDS57181.1	5	422	0	5.73	15	319.6	0	-4,-7	-	-	15.66	PRINCIPAL:1
ENSMUSG00000027168	Pax6	ENSMUST00000140173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000153639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000142772	ENSMUSP00000139168	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000156216	ENSMUSP00000119375	TRANSLATION	protein_coding	stop	-	5	139	0	2.33	0	216.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000123063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000172990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000111088	ENSMUSP00000106717	TRANSLATION	protein_coding	-	-	1	254	0	2.55	0	80.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000145744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000111087	ENSMUSP00000106716	TRANSLATION	protein_coding	-	CCDS57181.1	1	422	0	5.73	15	319.6	0	-4,-7	-	-	15.66	PRINCIPAL:1
ENSMUSG00000027168	Pax6	ENSMUST00000153011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000154302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000138365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000111085	ENSMUSP00000106714	TRANSLATION	protein_coding	-	CCDS16499.1	5	436	0	5.48	16.3	299.1	0	-4,-7	-	-	14.272	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000154643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000111086	ENSMUSP00000106715	TRANSLATION	protein_coding	-	CCDS16499.1	1	436	0	5.48	16.3	299.1	0	-4,-7	-	-	14.272	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000090391	ENSMUSP00000087870	TRANSLATION	protein_coding	-	CCDS16499.1	1	436	0	5.48	16.3	299.1	0	-4,-7	-	-	14.272	MINOR
ENSMUSG00000027168	Pax6	ENSMUST00000147923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000135412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000123000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000111082	ENSMUSP00000106711	TRANSLATION	protein_coding	-	CCDS57181.1	1	422	0	5.73	15	319.6	0	-4,-7	-	-	15.66	PRINCIPAL:1
ENSMUSG00000027168	Pax6	ENSMUST00000155081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027168	Pax6	ENSMUST00000090397	ENSMUSP00000087878	TRANSLATION	protein_coding	-	CCDS57181.1	5	422	0	5.73	15	319.6	0	-4,-7	-	-	15.66	PRINCIPAL:1
ENSMUSG00000027168	Pax6	ENSMUST00000147946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027168	Pax6	ENSMUST00000167211	ENSMUSP00000129344	TRANSLATION	protein_coding	-	CCDS16499.1	5	436	0	5.48	16.3	299.1	0	-4,-7	-	-	14.272	MINOR
ENSMUSG00000049560	Defb20	ENSMUST00000109836	ENSMUSP00000105462	TRANSLATION	protein_coding	-	CCDS38275.1	1	96	0	0	1.7	28.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000002731	Prkra	ENSMUST00000002808	ENSMUSP00000002808	TRANSLATION	protein_coding	-	CCDS16159.1	1	313	0	5.8	7.5	132.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000002731	Prkra	ENSMUST00000140493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086598	Btbd18	ENSMUST00000133437	ENSMUSP00000142247	TRANSLATION	protein_coding	-	CCDS79815.1	3	723	0	0.4	1.5	64.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000086598	Btbd18	ENSMUST00000144684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036813	Entpd8	ENSMUST00000149470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036813	Entpd8	ENSMUST00000152326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036813	Entpd8	ENSMUST00000114376	ENSMUSP00000110017	TRANSLATION	protein_coding	-	-	5	457	5	7.4	2.4	303.2	1	-1,-5	-	-	13.562	MINOR
ENSMUSG00000036813	Entpd8	ENSMUST00000135004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036813	Entpd8	ENSMUST00000044078	ENSMUSP00000040628	TRANSLATION	protein_coding	-	CCDS15748.1	1	497	5	7.76	2.7	348.5	1	-1,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000036813	Entpd8	ENSMUST00000127384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036813	Entpd8	ENSMUST00000150625	ENSMUSP00000142316	TRANSLATION	nonsense_mediated_decay	start	-	5	105	1	1	0	34.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036813	Entpd8	ENSMUST00000114380	ENSMUSP00000110022	TRANSLATION	protein_coding	-	CCDS15748.1	1	497	5	7.76	2.7	348.5	1	-1,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000026672	Optn	ENSMUST00000145501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026672	Optn	ENSMUST00000125203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026672	Optn	ENSMUST00000027986	ENSMUSP00000027986	TRANSLATION	protein_coding	-	CCDS15663.1	1	584	3	5	0.5	183.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026672	Optn	ENSMUST00000143809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026672	Optn	ENSMUST00000114996	ENSMUSP00000110648	TRANSLATION	protein_coding	-	CCDS15663.1	1	584	3	5	0.5	183.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026853	Crat	ENSMUST00000129494	ENSMUSP00000122025	TRANSLATION	protein_coding	stop	-	2	61	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000028207	ENSMUSP00000028207	TRANSLATION	protein_coding	-	CCDS15882.1	1	626	27	14.41	7.5	665.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026853	Crat	ENSMUST00000146603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026853	Crat	ENSMUST00000154595	ENSMUSP00000114925	TRANSLATION	protein_coding	start/stop	-	3	132	9	3.58	0	114.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000102855	ENSMUSP00000099919	TRANSLATION	protein_coding	-	CCDS15882.1	1	626	27	14.41	7.5	665.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000026853	Crat	ENSMUST00000128593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026853	Crat	ENSMUST00000132981	ENSMUSP00000118507	TRANSLATION	protein_coding	stop	-	5	205	3	4.33	0	182.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000134120	ENSMUSP00000117593	TRANSLATION	protein_coding	stop	-	2	44	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000102854	ENSMUSP00000099918	TRANSLATION	protein_coding	-	-	5	605	27	14.41	3.4	665.7	0	-4,-7	-	-	19.107	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000156702	ENSMUSP00000117317	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000146822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026853	Crat	ENSMUST00000142096	ENSMUSP00000119735	TRANSLATION	protein_coding	-	-	2	58	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000026853	Crat	ENSMUST00000155790	ENSMUSP00000122814	TRANSLATION	protein_coding	start	-	5	201	17	5.33	0	218.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027463	Slc52a3	ENSMUST00000109858	ENSMUSP00000105484	TRANSLATION	protein_coding	-	CCDS50749.1	1	250	0	0	0.5	0	5	0,-3	-	-	0	MINOR
ENSMUSG00000027463	Slc52a3	ENSMUST00000073228	ENSMUSP00000072961	TRANSLATION	protein_coding	-	CCDS16876.1	1	460	0	0	1.5	134.7	11	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000027463	Slc52a3	ENSMUST00000109861	ENSMUSP00000105487	TRANSLATION	protein_coding	-	CCDS16876.1	1	460	0	0	1.5	134.7	11	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000027463	Slc52a3	ENSMUST00000109859	ENSMUSP00000105485	TRANSLATION	protein_coding	-	CCDS50749.1	5	250	0	0	0.5	0	5	0,-3	-	-	0	MINOR
ENSMUSG00000039476	Prrx2	ENSMUST00000137924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039476	Prrx2	ENSMUST00000150299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039476	Prrx2	ENSMUST00000113592	ENSMUSP00000109222	TRANSLATION	protein_coding	-	-	1	175	0	1.6	0	112.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000039476	Prrx2	ENSMUST00000041659	ENSMUSP00000040332	TRANSLATION	protein_coding	-	CCDS15888.1	1	247	0	1.6	1.5	112.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000079071	Slc28a2b	ENSMUST00000110521	ENSMUSP00000106150	TRANSLATION	protein_coding	-	CCDS38223.1	5	660	9	6.41	1.5	349.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079071	Slc28a2b	ENSMUST00000132215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062098	Btbd3	ENSMUST00000091556	ENSMUSP00000089144	TRANSLATION	protein_coding	-	CCDS16799.1	1	461	0	2.32	12.1	271.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000062098	Btbd3	ENSMUST00000155646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062098	Btbd3	ENSMUST00000128656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062098	Btbd3	ENSMUST00000075410	ENSMUSP00000074864	TRANSLATION	protein_coding	-	CCDS16798.1	1	530	0	2.32	0.5	271.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000036281	Snapc4	ENSMUST00000114115	ENSMUSP00000109750	TRANSLATION	protein_coding	-	-	1	1333	0	3.62	0.5	136.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036281	Snapc4	ENSMUST00000144871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000155643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000133778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000148024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000135171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000124843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000123934	ENSMUSP00000122456	TRANSLATION	protein_coding	start/stop	-	3	254	0	3.62	0	102	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036281	Snapc4	ENSMUST00000125789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000136054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000149316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000149850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036281	Snapc4	ENSMUST00000035427	ENSMUSP00000041767	TRANSLATION	protein_coding	-	CCDS15802.1	1	1325	0	3.62	0.5	136.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000036281	Snapc4	ENSMUST00000150121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075066	Olfr32	ENSMUST00000214973	ENSMUSP00000150370	TRANSLATION	protein_coding	stop	-	3	205	0	0.42	0	113.9	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000075066	Olfr32	ENSMUST00000215659	ENSMUSP00000150239	TRANSLATION	protein_coding	-	CCDS16407.1	3	308	0	1.02	1.5	177	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075066	Olfr32	ENSMUST00000215765	ENSMUSP00000149175	TRANSLATION	protein_coding	-	CCDS16407.1	3	308	0	1.02	1.5	177	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075066	Olfr32	ENSMUST00000215153	ENSMUSP00000150246	TRANSLATION	protein_coding	-	CCDS16407.1	2	308	0	1.02	1.5	177	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075066	Olfr32	ENSMUST00000099755	ENSMUSP00000097344	TRANSLATION	protein_coding	-	CCDS16407.1	-	308	0	1.02	1.5	177	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075066	Olfr32	ENSMUST00000213293	ENSMUSP00000149443	TRANSLATION	protein_coding	stop	-	2	241	0	1.02	0	137.8	10	-4,-5	-	-	-1	MINOR
ENSMUSG00000058620	Adra2b	ENSMUST00000071902	ENSMUSP00000071798	TRANSLATION	protein_coding	-	CCDS16701.1	-	453	0	0.48	1.5	241.8	6	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000058620	Adra2b	ENSMUST00000104934	ENSMUSP00000100539	TRANSLATION	protein_coding	-	-	-	448	0	0.48	1.2	241.8	6	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000075318	Scn2a	ENSMUST00000202162	ENSMUSP00000143888	TRANSLATION	nonsense_mediated_decay	start	-	5	99	0	0.4	0	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075318	Scn2a	ENSMUST00000202653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075318	Scn2a	ENSMUST00000144254	ENSMUSP00000117955	TRANSLATION	protein_coding	stop	-	5	504	0	8.12	0	275.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000075318	Scn2a	ENSMUST00000201378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075318	Scn2a	ENSMUST00000239325	ENSMUSP00000159244	TRANSLATION	nonsense_mediated_decay	start	-	-	470	0	2.61	0	383.5	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000075318	Scn2a	ENSMUST00000200829	ENSMUSP00000143882	TRANSLATION	protein_coding	-	CCDS84529.1	5	2006	0	15.5	7.5	1361.5	12	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000075318	Scn2a	ENSMUST00000028377	ENSMUSP00000028377	TRANSLATION	protein_coding	-	CCDS38130.1	5	2006	0	14.5	7.5	1357.4	12	-4,-7	-	-	12.756	MINOR
ENSMUSG00000075318	Scn2a	ENSMUST00000202508	ENSMUSP00000143958	TRANSLATION	nonsense_mediated_decay	start	-	1	106	0	0.4	0	70.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075318	Scn2a	ENSMUST00000138368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075318	Scn2a	ENSMUST00000100067	ENSMUSP00000097645	TRANSLATION	protein_coding	-	CCDS38130.1	5	2006	0	14.5	7.5	1357.4	12	-4,-7	-	-	12.756	MINOR
ENSMUSG00000026893	Gca	ENSMUST00000028257	ENSMUSP00000028257	TRANSLATION	protein_coding	-	CCDS16069.1	1	220	19	4.48	2.7	32.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026893	Gca	ENSMUST00000148083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037754	Ppp1r16b	ENSMUST00000145073	ENSMUSP00000117310	TRANSLATION	protein_coding	start	-	5	468	0	4.65	0	62.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037754	Ppp1r16b	ENSMUST00000129902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037754	Ppp1r16b	ENSMUST00000103116	ENSMUSP00000099405	TRANSLATION	protein_coding	-	CCDS16991.1	5	568	0	5.89	7.5	106.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037754	Ppp1r16b	ENSMUST00000052927	ENSMUSP00000062615	TRANSLATION	protein_coding	-	CCDS16991.1	1	568	0	5.89	7.5	106.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037754	Ppp1r16b	ENSMUST00000045503	ENSMUSP00000039540	TRANSLATION	protein_coding	-	CCDS16991.1	1	568	0	5.89	7.5	106.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000026822	Lcn2	ENSMUST00000050785	ENSMUSP00000053962	TRANSLATION	protein_coding	-	CCDS15913.1	1	200	0	4.83	0.5	88.4	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026822	Lcn2	ENSMUST00000147219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026822	Lcn2	ENSMUST00000136509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026822	Lcn2	ENSMUST00000155830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026822	Lcn2	ENSMUST00000192241	ENSMUSP00000141430	TRANSLATION	protein_coding	stop	-	5	271	0	4.5	0	78.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000026822	Lcn2	ENSMUST00000144569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097187	Gm19426	ENSMUST00000181711	ENSMUSP00000137761	TRANSLATION	protein_coding	-	-	2	77	0	0	0	0	0	0,2	-	-	0	PRINCIPAL:1
ENSMUSG00000059023	Olfr1201	ENSMUST00000214018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059023	Olfr1201	ENSMUST00000216213	ENSMUSP00000150454	TRANSLATION	protein_coding	-	CCDS16349.1	5	307	0	0.3	6.4	156.8	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059023	Olfr1201	ENSMUST00000073458	ENSMUSP00000073163	TRANSLATION	protein_coding	-	CCDS16349.1	-	307	0	0.3	6.4	156.8	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000070476	Fam217b	ENSMUST00000094251	ENSMUSP00000091805	TRANSLATION	protein_coding	-	CCDS38372.1	1	387	0	0	1.5	294.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070476	Fam217b	ENSMUST00000129003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027157	A26c3	ENSMUST00000142636	ENSMUSP00000117759	TRANSLATION	protein_coding	stop	-	5	267	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027157	A26c3	ENSMUST00000028577	ENSMUSP00000028577	TRANSLATION	protein_coding	-	CCDS16514.1	1	485	0	4.73	0.5	86.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036591	Arhgap21	ENSMUST00000131542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036591	Arhgap21	ENSMUST00000125783	ENSMUSP00000123403	TRANSLATION	protein_coding	stop	-	5	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036591	Arhgap21	ENSMUST00000141298	ENSMUSP00000120357	TRANSLATION	protein_coding	-	CCDS50512.1	5	1955	4	11.916	0.5	260.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000036591	Arhgap21	ENSMUST00000173654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000114594	ENSMUSP00000110241	TRANSLATION	protein_coding	-	-	5	1949	4	11.916	0	260.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000036591	Arhgap21	ENSMUST00000173784	ENSMUSP00000133539	TRANSLATION	protein_coding	start/stop	-	5	396	4	6.89	0	179.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036591	Arhgap21	ENSMUST00000173566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000127512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036591	Arhgap21	ENSMUST00000173194	ENSMUSP00000133851	TRANSLATION	protein_coding	-	CCDS38054.2	1	1945	4	11.85	0.5	260.5	0	-4,-5	-	-	15.868	PRINCIPAL:3
ENSMUSG00000036591	Arhgap21	ENSMUST00000143491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036591	Arhgap21	ENSMUST00000154657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036591	Arhgap21	ENSMUST00000136241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000156142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000154230	ENSMUSP00000122497	TRANSLATION	protein_coding	-	CCDS50512.1	1	1955	4	11.916	0.5	260.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000036591	Arhgap21	ENSMUST00000174825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000131394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036591	Arhgap21	ENSMUST00000140230	ENSMUSP00000122271	TRANSLATION	protein_coding	stop	-	5	145	0	2.83	0	33.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036591	Arhgap21	ENSMUST00000174584	ENSMUSP00000133347	TRANSLATION	protein_coding	start	-	5	1263	4	8.256	0	222.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018211	Wfdc15b	ENSMUST00000018355	ENSMUSP00000018355	TRANSLATION	protein_coding	-	CCDS38320.1	1	80	0	0	0.5	36	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000018211	Wfdc15b	ENSMUST00000164567	ENSMUSP00000132507	TRANSLATION	protein_coding	-	CCDS38320.1	2	80	0	0	0.5	36	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000018211	Wfdc15b	ENSMUST00000109376	ENSMUSP00000105001	TRANSLATION	protein_coding	-	CCDS38320.1	1	80	0	0	0.5	36	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078861	Zfp931	ENSMUST00000131702	ENSMUSP00000120716	TRANSLATION	protein_coding	-	-	3	46	0	1	0	79.6	0	-4,-5	-	-	2.448	MINOR
ENSMUSG00000078861	Zfp931	ENSMUST00000108924	ENSMUSP00000104552	TRANSLATION	protein_coding	-	CCDS50836.1	3	298	31	2.45	0.5	264.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078861	Zfp931	ENSMUST00000108923	ENSMUSP00000104551	TRANSLATION	protein_coding	-	-	1	64	0	1.45	1.5	79.6	0	-4,-5	-	-	3.552	MINOR
ENSMUSG00000078861	Zfp931	ENSMUST00000123265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078903	Gm14391	ENSMUST00000165892	ENSMUSP00000127636	TRANSLATION	protein_coding	-	CCDS38363.1	5	554	67	2.55	0.5	432.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078903	Gm14391	ENSMUST00000109056	ENSMUSP00000104684	TRANSLATION	protein_coding	-	-	3	522	67	1.55	0	352.4	0	-4,-5	-	-	10.848	MINOR
ENSMUSG00000078903	Gm14391	ENSMUST00000099028	ENSMUSP00000096626	TRANSLATION	protein_coding	-	-	5	72	0	1.95	0.5	80.1	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000078903	Gm14391	ENSMUST00000109055	ENSMUSP00000104683	TRANSLATION	protein_coding	-	-	1	64	0	1.95	1.5	80.1	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000078903	Gm14391	ENSMUST00000109058	ENSMUSP00000104686	TRANSLATION	protein_coding	-	CCDS38363.1	3	554	67	2.55	0.5	432.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078903	Gm14391	ENSMUST00000151240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044560	Olfr1302	ENSMUST00000214708	ENSMUSP00000149935	TRANSLATION	protein_coding	-	-	5	312	0	0.42	3.9	166.7	8	-3,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000044560	Olfr1302	ENSMUST00000215244	ENSMUSP00000150896	TRANSLATION	protein_coding	-	-	5	312	0	0.42	3.9	166.7	8	-3,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000044560	Olfr1302	ENSMUST00000054004	ENSMUSP00000061674	TRANSLATION	protein_coding	-	CCDS16533.1	-	315	0	0.42	3.9	166.7	8	-3,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000038572	Bpifb5	ENSMUST00000045959	ENSMUSP00000046683	TRANSLATION	protein_coding	-	CCDS16928.1	1	490	0	0	0.5	43.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000111021	Olfr50	ENSMUST00000216753	ENSMUSP00000149648	TRANSLATION	protein_coding	-	CCDS15981.1	5	312	0	0.42	1.5	189.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000111021	Olfr50	ENSMUST00000112950	ENSMUSP00000108572	TRANSLATION	protein_coding	-	CCDS15981.1	-	312	0	0.42	1.5	189.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000111021	Olfr50	ENSMUST00000217041	ENSMUSP00000149484	TRANSLATION	protein_coding	-	CCDS15981.1	5	312	0	0.42	1.5	189.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078901	Gm14440	ENSMUST00000109051	ENSMUSP00000104679	TRANSLATION	protein_coding	-	CCDS84589.1	1	64	0	1.45	1.5	72.2	0	-4,-5	-	-	11.994	PRINCIPAL:1
ENSMUSG00000078901	Gm14440	ENSMUST00000098998	ENSMUSP00000096596	TRANSLATION	protein_coding	start	-	5	63	0	1.45	1.5	72.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075100	Olfr1223	ENSMUST00000217342	ENSMUSP00000150550	TRANSLATION	protein_coding	-	CCDS16368.1	2	311	0	0.2	2.7	161.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057914	Cacnb2	ENSMUST00000193730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000114719	ENSMUSP00000110367	TRANSLATION	protein_coding	-	CCDS84473.1	1	611	0	10.35	6.3	247	0	-4,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000057914	Cacnb2	ENSMUST00000193800	ENSMUSP00000141221	TRANSLATION	protein_coding	-	CCDS79735.1	1	605	0	10.35	6.3	247	0	-4,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000057914	Cacnb2	ENSMUST00000148676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000193522	ENSMUSP00000141742	TRANSLATION	protein_coding	start/stop	-	5	143	0	4.462	0	66.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057914	Cacnb2	ENSMUST00000137746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000156027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000193452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000114718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000195841	ENSMUSP00000142281	TRANSLATION	protein_coding	-	-	3	72	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057914	Cacnb2	ENSMUST00000194921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000114723	ENSMUSP00000110371	TRANSLATION	protein_coding	-	CCDS15702.1	1	655	0	10.35	0.5	247	0	-4,-5	-	-	12	MINOR
ENSMUSG00000057914	Cacnb2	ENSMUST00000193262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057914	Cacnb2	ENSMUST00000123719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000191903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057914	Cacnb2	ENSMUST00000144423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101391	Olfr1217	ENSMUST00000099799	ENSMUSP00000097387	TRANSLATION	protein_coding	-	CCDS16362.1	-	304	0	0.2	1.5	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101391	Olfr1217	ENSMUST00000216592	ENSMUSP00000149931	TRANSLATION	protein_coding	-	CCDS16362.1	5	304	0	0.2	1.5	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101391	Olfr1217	ENSMUST00000213669	ENSMUSP00000150715	TRANSLATION	protein_coding	-	CCDS16362.1	5	304	0	0.2	1.5	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101391	Olfr1217	ENSMUST00000214022	ENSMUSP00000149066	TRANSLATION	protein_coding	-	CCDS16362.1	3	304	0	0.2	1.5	162.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003660	Snrnp200	ENSMUST00000142327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003660	Snrnp200	ENSMUST00000131435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003660	Snrnp200	ENSMUST00000103220	ENSMUSP00000099509	TRANSLATION	protein_coding	-	CCDS16695.1	1	2136	21	43	13	791.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000003660	Snrnp200	ENSMUST00000140868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003660	Snrnp200	ENSMUST00000143481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068009	Bpifb6	ENSMUST00000135501	ENSMUSP00000119046	TRANSLATION	protein_coding	stop	-	5	279	0	2.74	0	79.6	0	3,-1	-	-	-1	MINOR
ENSMUSG00000068009	Bpifb6	ENSMUST00000088955	ENSMUSP00000086347	TRANSLATION	protein_coding	-	CCDS16920.1	1	449	0	5.3	1.5	139.9	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000026817	Ak1	ENSMUST00000195721	ENSMUSP00000142174	TRANSLATION	protein_coding	stop	-	3	96	6	2.75	0	110.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026817	Ak1	ENSMUST00000068271	ENSMUSP00000068479	TRANSLATION	protein_coding	-	CCDS15924.1	1	210	11	4.83	0.5	178.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000026817	Ak1	ENSMUST00000156578	ENSMUSP00000123534	TRANSLATION	protein_coding	stop	-	2	89	10	2.25	0	97.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026817	Ak1	ENSMUST00000113278	ENSMUSP00000108903	TRANSLATION	protein_coding	-	CCDS57167.1	1	194	11	4.83	19.5	178.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000026817	Ak1	ENSMUST00000135392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026817	Ak1	ENSMUST00000113277	ENSMUSP00000108902	TRANSLATION	protein_coding	-	CCDS57167.1	1	194	11	4.83	19.5	178.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059361	Nrsn2	ENSMUST00000079278	ENSMUSP00000078260	TRANSLATION	protein_coding	-	CCDS16882.1	1	202	0	0	1.5	116.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000026873	Phf19	ENSMUST00000128394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026873	Phf19	ENSMUST00000202907	ENSMUSP00000143954	TRANSLATION	protein_coding	stop	-	5	88	0	1.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026873	Phf19	ENSMUST00000129911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026873	Phf19	ENSMUST00000128663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026873	Phf19	ENSMUST00000028232	ENSMUSP00000028232	TRANSLATION	protein_coding	-	CCDS15955.1	1	578	15	3.15	5.1	122.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041219	Arhgap11a	ENSMUST00000110948	ENSMUSP00000106573	TRANSLATION	protein_coding	-	-	1	457	0	5.35	0	113.9	0	-3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000041219	Arhgap11a	ENSMUST00000110949	ENSMUSP00000106574	TRANSLATION	protein_coding	-	CCDS16562.1	5	987	0	5.35	0.5	113.9	0	-3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000041219	Arhgap11a	ENSMUST00000110947	ENSMUSP00000106572	TRANSLATION	protein_coding	-	-	1	498	0	5.35	1.2	113.9	0	-3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000041219	Arhgap11a	ENSMUST00000102545	ENSMUSP00000099604	TRANSLATION	protein_coding	-	CCDS16562.1	5	987	0	5.35	0.5	113.9	0	-3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000089892	Olfr1199	ENSMUST00000099813	ENSMUSP00000097401	TRANSLATION	protein_coding	-	CCDS16347.1	-	310	0	0.36	8.8	162.5	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000089892	Olfr1199	ENSMUST00000131038	ENSMUSP00000150987	TRANSLATION	protein_coding	-	CCDS16347.1	2	310	0	0.36	8.8	162.5	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000089892	Olfr1199	ENSMUST00000124021	ENSMUSP00000149586	TRANSLATION	protein_coding	-	CCDS16347.1	3	310	0	0.36	8.8	162.5	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000089892	Olfr1199	ENSMUST00000213138	ENSMUSP00000149809	TRANSLATION	protein_coding	-	CCDS16347.1	5	310	0	0.36	8.8	162.5	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000017300	Tnnc2	ENSMUST00000103095	ENSMUSP00000099384	TRANSLATION	protein_coding	-	CCDS17056.1	1	160	23	3.83	19.5	115	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017300	Tnnc2	ENSMUST00000155443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027208	Fgf7	ENSMUST00000110442	ENSMUSP00000106072	TRANSLATION	protein_coding	-	CCDS16681.1	1	194	7	3	13.5	164.3	0	-1,-4	-	-	22	PRINCIPAL:1
ENSMUSG00000027208	Fgf7	ENSMUST00000138576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027208	Fgf7	ENSMUST00000064794	ENSMUSP00000069681	TRANSLATION	protein_coding	-	CCDS16681.1	1	194	7	3	13.5	164.3	0	-1,-4	-	-	22	PRINCIPAL:1
ENSMUSG00000027030	Stk39	ENSMUST00000126663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027030	Stk39	ENSMUST00000130380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027030	Stk39	ENSMUST00000102715	ENSMUSP00000099776	TRANSLATION	protein_coding	-	CCDS16084.1	1	556	19	12.52	0.5	288.5	0	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000027030	Stk39	ENSMUST00000134442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027030	Stk39	ENSMUST00000139407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027030	Stk39	ENSMUST00000149581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027030	Stk39	ENSMUST00000123781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027030	Stk39	ENSMUST00000144457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012350	Ehf	ENSMUST00000111174	ENSMUSP00000106805	TRANSLATION	protein_coding	-	CCDS16475.1	1	300	0	4.065	11.5	204.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000012350	Ehf	ENSMUST00000137774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012350	Ehf	ENSMUST00000128546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012350	Ehf	ENSMUST00000151265	ENSMUSP00000118275	TRANSLATION	protein_coding	stop	-	3	127	0	0.8	0	92.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012350	Ehf	ENSMUST00000111176	ENSMUSP00000106807	TRANSLATION	protein_coding	-	-	5	277	0	4.065	4.4	204.3	0	-4,-5	-	-	12.972	MINOR
ENSMUSG00000012350	Ehf	ENSMUST00000125788	ENSMUSP00000121103	TRANSLATION	protein_coding	stop	-	3	242	0	2.065	0	91.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012350	Ehf	ENSMUST00000090475	ENSMUSP00000087961	TRANSLATION	protein_coding	-	CCDS16475.1	1	300	0	4.065	11.5	204.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000012350	Ehf	ENSMUST00000140503	ENSMUSP00000114979	TRANSLATION	protein_coding	stop	-	5	181	0	0.8	0	91.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033059	Pygb	ENSMUST00000135717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033059	Pygb	ENSMUST00000045441	ENSMUSP00000035743	TRANSLATION	protein_coding	-	CCDS16862.1	1	843	31	18.75	15.5	1152.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000033059	Pygb	ENSMUST00000139938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033059	Pygb	ENSMUST00000129610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033059	Pygb	ENSMUST00000154366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027431	Scp2d1	ENSMUST00000028918	ENSMUSP00000028918	TRANSLATION	protein_coding	-	CCDS38255.1	-	156	0	0.8	7.5	64.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048486	Fitm2	ENSMUST00000109418	ENSMUSP00000105045	TRANSLATION	protein_coding	-	CCDS38315.1	1	262	0	0	8.8	69.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000037820	Tgm2	ENSMUST00000140923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037820	Tgm2	ENSMUST00000174718	ENSMUSP00000133662	TRANSLATION	nonsense_mediated_decay	-	-	5	146	0	2	0	118.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037820	Tgm2	ENSMUST00000152690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037820	Tgm2	ENSMUST00000103122	ENSMUSP00000099411	TRANSLATION	protein_coding	-	CCDS16985.1	1	686	10	12.33	6.3	345.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000046804	Phgr1	ENSMUST00000130293	ENSMUSP00000135093	TRANSLATION	protein_coding	-	CCDS57182.1	5	112	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000046804	Phgr1	ENSMUST00000061360	ENSMUSP00000134831	TRANSLATION	protein_coding	-	-	5	111	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000027593	Raly	ENSMUST00000109701	ENSMUSP00000105323	TRANSLATION	protein_coding	-	CCDS16939.1	1	296	0	1.75	0.5	47.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000027593	Raly	ENSMUST00000152038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027593	Raly	ENSMUST00000029120	ENSMUSP00000029120	TRANSLATION	protein_coding	-	CCDS50767.1	5	312	0	1.75	1.5	47.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000027593	Raly	ENSMUST00000145202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027593	Raly	ENSMUST00000140713	ENSMUSP00000119126	TRANSLATION	protein_coding	stop	-	5	298	0	1.75	0	47.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027593	Raly	ENSMUST00000116389	ENSMUSP00000112090	TRANSLATION	protein_coding	-	CCDS50767.1	5	312	0	1.75	1.5	47.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000027593	Raly	ENSMUST00000058089	ENSMUSP00000058105	TRANSLATION	protein_coding	-	CCDS16939.1	1	296	0	1.75	0.5	47.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000027593	Raly	ENSMUST00000151578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027593	Raly	ENSMUST00000129137	ENSMUSP00000114185	TRANSLATION	protein_coding	stop	-	5	211	0	1.75	0	47.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027593	Raly	ENSMUST00000125872	ENSMUSP00000119108	TRANSLATION	protein_coding	stop	-	3	141	0	1.75	0	47.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000026796	Fam129b	ENSMUST00000151607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026796	Fam129b	ENSMUST00000154514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026796	Fam129b	ENSMUST00000125347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000026796	Fam129b	ENSMUST00000138781	ENSMUSP00000114232	TRANSLATION	protein_coding	stop	-	2	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026796	Fam129b	ENSMUST00000028135	ENSMUSP00000028135	TRANSLATION	protein_coding	-	CCDS15934.1	1	749	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000026796	Fam129b	ENSMUST00000150875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027678	Ncoa3	ENSMUST00000088095	ENSMUSP00000085416	TRANSLATION	protein_coding	-	CCDS38333.1	1	1403	0	5.14	0.5	653	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027678	Ncoa3	ENSMUST00000139658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027678	Ncoa3	ENSMUST00000153507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027678	Ncoa3	ENSMUST00000109252	ENSMUSP00000104875	TRANSLATION	protein_coding	-	-	5	1402	0	5.14	0.5	653	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027678	Ncoa3	ENSMUST00000139394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000108976	Gm29797	ENSMUST00000207856	ENSMUSP00000146742	TRANSLATION	protein_coding	-	-	5	188	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000027502	Rtf2	ENSMUST00000140048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027502	Rtf2	ENSMUST00000029005	ENSMUSP00000029005	TRANSLATION	protein_coding	-	CCDS17132.1	1	307	3	0	2.7	324.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027502	Rtf2	ENSMUST00000109132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054582	Pabpc1l	ENSMUST00000141671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054582	Pabpc1l	ENSMUST00000067715	ENSMUSP00000096701	TRANSLATION	protein_coding	-	CCDS50792.1	1	607	0	10.35	1.5	377.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054582	Pabpc1l	ENSMUST00000156087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054582	Pabpc1l	ENSMUST00000150523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054582	Pabpc1l	ENSMUST00000126272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000156824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000132287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000071442	ENSMUSP00000071387	TRANSLATION	protein_coding	-	CCDS15771.1	1	332	0	0	1.5	691.2	3	3,-2	-	-	1.716	MINOR
ENSMUSG00000015094	Npdc1	ENSMUST00000124277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000141106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000136138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000133409	ENSMUSP00000117773	TRANSLATION	protein_coding	start	-	3	274	0	0	0	516.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000015094	Npdc1	ENSMUST00000138651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000154809	ENSMUSP00000123386	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	285.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000015094	Npdc1	ENSMUST00000144413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000055921	ENSMUSP00000049602	TRANSLATION	protein_coding	-	-	5	341	0	0	0	762.6	3	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000015094	Npdc1	ENSMUST00000141567	ENSMUSP00000116275	TRANSLATION	protein_coding	stop	-	3	231	0	0	0	441.1	3	3,-2	-	-	-1	MINOR
ENSMUSG00000015094	Npdc1	ENSMUST00000128144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015094	Npdc1	ENSMUST00000131185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037773	Pced1a	ENSMUST00000141749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037773	Pced1a	ENSMUST00000131561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037773	Pced1a	ENSMUST00000110277	ENSMUSP00000105906	TRANSLATION	protein_coding	-	CCDS50711.1	1	449	0	0	0.5	31.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037773	Pced1a	ENSMUST00000089581	ENSMUSP00000087009	TRANSLATION	protein_coding	-	CCDS50711.1	1	449	0	0	0.5	31.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037773	Pced1a	ENSMUST00000123977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037773	Pced1a	ENSMUST00000142536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037773	Pced1a	ENSMUST00000153663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078906	Gm14444	ENSMUST00000109069	ENSMUSP00000104697	TRANSLATION	protein_coding	-	-	2	64	0	1.3	1.5	75.1	0	-4,-5	-	-	3.804	MINOR
ENSMUSG00000078906	Gm14444	ENSMUST00000109070	ENSMUSP00000104698	TRANSLATION	protein_coding	-	-	3	426	43	2.05	0	294.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017310	Spint4	ENSMUST00000017454	ENSMUSP00000017454	TRANSLATION	protein_coding	-	CCDS17051.1	1	159	0	1.2	0.5	55.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078872	Gm14401	ENSMUST00000108970	ENSMUSP00000104598	TRANSLATION	protein_coding	-	-	3	303	26	2.25	0	199	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078872	Gm14401	ENSMUST00000108968	ENSMUSP00000104596	TRANSLATION	protein_coding	-	-	5	64	0	1.45	1.5	80.1	0	-4,-5	-	-	3.864	MINOR
ENSMUSG00000078872	Gm14401	ENSMUST00000108969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078872	Gm14401	ENSMUST00000134614	ENSMUSP00000119549	TRANSLATION	protein_coding	-	-	2	303	26	2.25	0	199	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042272	Sestd1	ENSMUST00000102659	ENSMUSP00000099720	TRANSLATION	protein_coding	-	CCDS16163.1	1	696	0	0	14.8	28.2	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000042272	Sestd1	ENSMUST00000139021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042272	Sestd1	ENSMUST00000102660	ENSMUSP00000099721	TRANSLATION	protein_coding	-	CCDS16163.1	5	696	0	0	14.8	28.2	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000042272	Sestd1	ENSMUST00000145366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027447	Cst3	ENSMUST00000149691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027447	Cst3	ENSMUST00000144845	ENSMUSP00000117672	TRANSLATION	protein_coding	stop	-	3	102	0	1.75	0	81	0	4,-1	-	-	-1	MINOR
ENSMUSG00000027447	Cst3	ENSMUST00000028938	ENSMUSP00000028938	TRANSLATION	protein_coding	-	CCDS16852.1	1	140	0	2.83	2.7	104.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000042369	Rbm45	ENSMUST00000046389	ENSMUSP00000040420	TRANSLATION	protein_coding	-	CCDS16157.1	1	476	0	2.2	1.5	158.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027430	Dtd1	ENSMUST00000137406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027430	Dtd1	ENSMUST00000125683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027430	Dtd1	ENSMUST00000145602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027430	Dtd1	ENSMUST00000145814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027430	Dtd1	ENSMUST00000028917	ENSMUSP00000028917	TRANSLATION	protein_coding	-	CCDS16824.1	1	209	3	4.5	17.5	177.1	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000027227	Sord	ENSMUST00000110551	ENSMUSP00000106180	TRANSLATION	protein_coding	-	CCDS16657.1	1	357	26	8	7.5	82.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039686	Zer1	ENSMUST00000131858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039686	Zer1	ENSMUST00000152285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000133354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000113677	ENSMUSP00000109307	TRANSLATION	protein_coding	-	CCDS71017.1	1	766	0	0	12.8	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000039686	Zer1	ENSMUST00000152068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000154231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000149818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000139128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039686	Zer1	ENSMUST00000044751	ENSMUSP00000046441	TRANSLATION	protein_coding	-	CCDS15870.1	1	779	0	0	1.5	0	0	-4,-5	-	-	0.168	MINOR
ENSMUSG00000041911	Dlx1	ENSMUST00000037119	ENSMUSP00000042413	TRANSLATION	protein_coding	-	CCDS16116.1	1	255	0	2.08	15	72.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041911	Dlx1	ENSMUST00000145444	ENSMUSP00000134713	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041911	Dlx1	ENSMUST00000126400	ENSMUSP00000133592	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041911	Dlx1	ENSMUST00000172629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041911	Dlx1	ENSMUST00000145088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041911	Dlx1	ENSMUST00000152711	ENSMUSP00000133288	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036327	Qsox2	ENSMUST00000091263	ENSMUSP00000088807	TRANSLATION	protein_coding	-	-	1	527	24	7.8	0	94	0	-4,-5	-	-	7.92	MINOR
ENSMUSG00000036327	Qsox2	ENSMUST00000036187	ENSMUSP00000037128	TRANSLATION	protein_coding	-	CCDS15798.1	5	639	28	9.9848	0.5	144.8	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000041358	Nutm1	ENSMUST00000043970	ENSMUSP00000048263	TRANSLATION	protein_coding	-	CCDS16549.1	1	1126	0	0	0.5	818	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000075111	Olfr1213	ENSMUST00000168169	ENSMUSP00000126588	TRANSLATION	protein_coding	-	CCDS16358.1	2	311	0	0.36	1.5	158.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075111	Olfr1213	ENSMUST00000144908	ENSMUSP00000149096	TRANSLATION	protein_coding	-	CCDS16358.1	3	311	0	0.36	1.5	158.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035875	AI182371	ENSMUST00000226631	ENSMUSP00000154570	TRANSLATION	protein_coding	-	-	-	352	0	7.57	0	98	0	0,-4	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000035875	AI182371	ENSMUST00000151161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035875	AI182371	ENSMUST00000134940	ENSMUSP00000144276	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	1	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000035875	AI182371	ENSMUST00000045776	ENSMUSP00000037754	TRANSLATION	protein_coding	-	CCDS15958.2	1	356	0	7.77	0.5	98	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000035875	AI182371	ENSMUST00000226375	ENSMUSP00000154339	TRANSLATION	nonsense_mediated_decay	-	-	-	57	0	1	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000035875	AI182371	ENSMUST00000226972	ENSMUSP00000154033	TRANSLATION	protein_coding	-	-	-	351	0	7.57	0	98	0	0,-4	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000035875	AI182371	ENSMUST00000154817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026942	Traf2	ENSMUST00000114234	ENSMUSP00000109872	TRANSLATION	protein_coding	-	CCDS71002.1	5	508	24	8.513	0.5	180	0	-4,-5	-	-	16.428	MINOR
ENSMUSG00000026942	Traf2	ENSMUST00000028311	ENSMUSP00000028311	TRANSLATION	protein_coding	-	CCDS15779.1	1	501	24	8.315	1.5	206.2	0	-4,-5	-	-	17.604	PRINCIPAL:1
ENSMUSG00000026942	Traf2	ENSMUST00000151742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059316	Slc27a4	ENSMUST00000080065	ENSMUSP00000078971	TRANSLATION	protein_coding	-	CCDS15858.1	1	643	23	6.09	6.3	267.2	0	-1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000059316	Slc27a4	ENSMUST00000136444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110912	Olfr1080	ENSMUST00000213185	ENSMUSP00000150502	TRANSLATION	protein_coding	-	CCDS16261.1	2	313	0	0.24	7.5	161.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000049630	C1ql3	ENSMUST00000061545	ENSMUSP00000056188	TRANSLATION	protein_coding	-	CCDS15692.1	1	255	0	1.8	12.8	166.4	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000039164	Naif1	ENSMUST00000048431	ENSMUSP00000048764	TRANSLATION	protein_coding	-	CCDS15916.1	1	327	0	0	6.3	85.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027007	Itprid2	ENSMUST00000111788	ENSMUSP00000107418	TRANSLATION	protein_coding	-	-	5	1219	0	0	0	463.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027007	Itprid2	ENSMUST00000111785	ENSMUSP00000107415	TRANSLATION	protein_coding	-	CCDS16170.1	1	1252	0	0	0.5	463.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000027007	Itprid2	ENSMUST00000111784	ENSMUSP00000107414	TRANSLATION	protein_coding	-	-	5	1230	0	0	0	463.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000027007	Itprid2	ENSMUST00000124938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027007	Itprid2	ENSMUST00000133266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074881	Mageb3	ENSMUST00000104936	ENSMUSP00000100541	TRANSLATION	protein_coding	-	CCDS16651.1	-	330	0	0.8	0.5	24.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000076441	Ass1	ENSMUST00000130195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076441	Ass1	ENSMUST00000192802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076441	Ass1	ENSMUST00000126474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076441	Ass1	ENSMUST00000102840	ENSMUSP00000099904	TRANSLATION	protein_coding	-	CCDS15898.1	1	412	29	10.83	7.5	585.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000017754	Pltp	ENSMUST00000109316	ENSMUSP00000104939	TRANSLATION	protein_coding	-	CCDS17063.1	1	493	0	8.59	0.5	359.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000017754	Pltp	ENSMUST00000059954	ENSMUSP00000061519	TRANSLATION	protein_coding	-	CCDS17063.1	1	493	0	8.59	0.5	359.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000017754	Pltp	ENSMUST00000142603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017754	Pltp	ENSMUST00000128110	ENSMUSP00000122760	TRANSLATION	protein_coding	stop	-	2	147	0	2.95	0	79.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000017754	Pltp	ENSMUST00000156255	ENSMUSP00000119955	TRANSLATION	protein_coding	stop	-	5	165	0	3.25	0	107.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000017754	Pltp	ENSMUST00000148912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017754	Pltp	ENSMUST00000109317	ENSMUSP00000104940	TRANSLATION	protein_coding	-	-	5	441	0	7.49	0	290.8	0	4,-1	-	-	5.682	MINOR
ENSMUSG00000079175	Gm11060	ENSMUST00000111107	ENSMUSP00000106736	TRANSLATION	protein_coding	start/stop	-	5	24	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000026788	Zbtb43	ENSMUST00000155198	ENSMUSP00000120989	TRANSLATION	protein_coding	stop	-	2	160	0	1.6	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026788	Zbtb43	ENSMUST00000113156	ENSMUSP00000108781	TRANSLATION	protein_coding	-	CCDS15942.1	1	504	12	2.4	1.5	98.7	0	-4,-2	-	-	18.141	MINOR
ENSMUSG00000026788	Zbtb43	ENSMUST00000095035	ENSMUSP00000092645	TRANSLATION	protein_coding	-	CCDS15942.1	5	504	12	2.4	1.5	98.7	0	-4,-2	-	-	18.141	MINOR
ENSMUSG00000026788	Zbtb43	ENSMUST00000126442	ENSMUSP00000122729	TRANSLATION	protein_coding	stop	-	1	71	0	1	0	52.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026788	Zbtb43	ENSMUST00000028125	ENSMUSP00000028125	TRANSLATION	protein_coding	-	CCDS15943.1	1	467	12	2.4	11.6	98.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000074678	Defb25	ENSMUST00000099203	ENSMUSP00000096809	TRANSLATION	protein_coding	-	CCDS38280.1	1	71	0	0	1.5	38.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000062997	Rpl35	ENSMUST00000126246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062997	Rpl35	ENSMUST00000152441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062997	Rpl35	ENSMUST00000080861	ENSMUSP00000079672	TRANSLATION	protein_coding	-	CCDS16015.1	1	123	0	2.75	17.5	73.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000074570	Cass4	ENSMUST00000109136	ENSMUSP00000104764	TRANSLATION	protein_coding	-	CCDS38347.1	1	804	0	1.8	1.5	402.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000074570	Cass4	ENSMUST00000228775	ENSMUSP00000154073	TRANSLATION	protein_coding	-	-	-	780	0	1.8	0.5	397	0	-4,-7	-	-	11.688	ALTERNATIVE:2
ENSMUSG00000074570	Cass4	ENSMUST00000103073	ENSMUSP00000099362	TRANSLATION	protein_coding	-	CCDS71205.1	1	778	0	1.8	0.5	397	0	-4,-7	-	-	11.688	ALTERNATIVE:2
ENSMUSG00000074570	Cass4	ENSMUST00000099061	ENSMUSP00000096660	TRANSLATION	protein_coding	-	-	1	685	0	1.2	0	229.8	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000038324	Trpc4ap	ENSMUST00000143115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038324	Trpc4ap	ENSMUST00000153246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038324	Trpc4ap	ENSMUST00000147913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038324	Trpc4ap	ENSMUST00000103140	ENSMUSP00000099429	TRANSLATION	protein_coding	-	CCDS16952.1	1	789	0	0	2.9	438.1	0	-2,0	-	-	6.655	PRINCIPAL:3
ENSMUSG00000038324	Trpc4ap	ENSMUST00000146484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038324	Trpc4ap	ENSMUST00000041059	ENSMUSP00000037574	TRANSLATION	protein_coding	-	CCDS50769.1	1	797	0	0	3.9	438.1	0	-2,0	-	-	7	ALTERNATIVE:2
ENSMUSG00000038324	Trpc4ap	ENSMUST00000152548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038324	Trpc4ap	ENSMUST00000136764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038324	Trpc4ap	ENSMUST00000130755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038324	Trpc4ap	ENSMUST00000140370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027015	Cybrd1	ENSMUST00000028403	ENSMUSP00000028403	TRANSLATION	protein_coding	-	CCDS50603.1	1	290	0	1.84	1.5	148.9	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078899	Gm4631	ENSMUST00000109050	ENSMUSP00000104678	TRANSLATION	protein_coding	start	-	5	497	59	2.05	0.5	389.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078899	Gm4631	ENSMUST00000121393	ENSMUSP00000113670	TRANSLATION	protein_coding	-	-	2	498	59	2.05	0.5	389.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000101174	Hoxd4	ENSMUST00000144040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101174	Hoxd4	ENSMUST00000047904	ENSMUSP00000047949	TRANSLATION	protein_coding	-	CCDS16145.1	5	250	0	1	1.5	76.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101174	Hoxd4	ENSMUST00000111980	ENSMUSP00000107611	TRANSLATION	protein_coding	-	CCDS16145.1	1	250	0	1	1.5	76.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027411	Vps16	ENSMUST00000028900	ENSMUSP00000028900	TRANSLATION	protein_coding	-	CCDS38242.1	1	839	0	5.69	7.5	1032.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027411	Vps16	ENSMUST00000128994	ENSMUSP00000115899	TRANSLATION	protein_coding	stop	-	5	316	0	0	0	236.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027411	Vps16	ENSMUST00000130258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027411	Vps16	ENSMUST00000125973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027411	Vps16	ENSMUST00000137084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027411	Vps16	ENSMUST00000131220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027411	Vps16	ENSMUST00000132388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027411	Vps16	ENSMUST00000134677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027411	Vps16	ENSMUST00000125098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001767	Crnkl1	ENSMUST00000145425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001767	Crnkl1	ENSMUST00000147904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001767	Crnkl1	ENSMUST00000001818	ENSMUSP00000001818	TRANSLATION	protein_coding	-	CCDS16828.1	1	690	0	13	10.2	96.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000017733	Eppin	ENSMUST00000103100	ENSMUSP00000099389	TRANSLATION	protein_coding	-	CCDS17043.1	1	134	0	1	1.5	103	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000075186	Olfr1058	ENSMUST00000102631	ENSMUSP00000099691	TRANSLATION	protein_coding	-	CCDS16254.1	-	316	0	0.2	0.5	167.9	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075186	Olfr1058	ENSMUST00000213998	ENSMUSP00000151037	TRANSLATION	protein_coding	-	CCDS16254.1	5	316	0	0.2	0.5	167.9	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094464	Olfr339	ENSMUST00000216645	ENSMUSP00000149068	TRANSLATION	protein_coding	-	CCDS15972.1	3	309	0	0.42	1.5	185.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094464	Olfr339	ENSMUST00000071437	ENSMUSP00000071383	TRANSLATION	protein_coding	-	CCDS15972.1	-	309	0	0.42	1.5	185.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074731	Zfp345	ENSMUST00000109914	ENSMUSP00000105540	TRANSLATION	protein_coding	-	CCDS50741.1	1	561	60	2.2	0.5	350.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043102	Qrfp	ENSMUST00000057407	ENSMUSP00000055746	TRANSLATION	protein_coding	-	CCDS15902.1	1	124	0	0	0.5	175.9	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035437	Rabgap1	ENSMUST00000130601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035437	Rabgap1	ENSMUST00000061179	ENSMUSP00000061624	TRANSLATION	protein_coding	-	CCDS16002.1	1	1064	0	8.85	1.5	340	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035437	Rabgap1	ENSMUST00000153145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035437	Rabgap1	ENSMUST00000159092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035437	Rabgap1	ENSMUST00000203470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035437	Rabgap1	ENSMUST00000148470	ENSMUSP00000119831	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035437	Rabgap1	ENSMUST00000205186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035437	Rabgap1	ENSMUST00000112920	ENSMUSP00000108542	TRANSLATION	protein_coding	-	CCDS16002.1	5	1064	0	8.85	1.5	340	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035437	Rabgap1	ENSMUST00000133434	ENSMUSP00000121963	TRANSLATION	protein_coding	stop	-	5	455	0	0	0	144.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035437	Rabgap1	ENSMUST00000066055	ENSMUSP00000068835	TRANSLATION	protein_coding	-	CCDS16003.1	1	809	0	7.382	0.5	340	1	-4,-5	-	-	9.066	MINOR
ENSMUSG00000027438	Napb	ENSMUST00000028926	ENSMUSP00000028926	TRANSLATION	protein_coding	-	CCDS16842.1	1	298	0	8.58	19.5	367.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027438	Napb	ENSMUST00000140647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027438	Napb	ENSMUST00000136513	ENSMUSP00000120979	TRANSLATION	nonsense_mediated_decay	-	-	5	115	0	2.75	0	99.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061311	Rag1	ENSMUST00000078494	ENSMUSP00000077584	TRANSLATION	protein_coding	-	CCDS16463.1	1	1040	15	1	2.7	479.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026918	Brd3	ENSMUST00000144758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026918	Brd3	ENSMUST00000154316	ENSMUSP00000114422	TRANSLATION	protein_coding	stop	-	5	682	0	6.1	0	243	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026918	Brd3	ENSMUST00000077737	ENSMUSP00000076918	TRANSLATION	protein_coding	-	CCDS15828.1	1	726	0	6.1	0.5	243	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026918	Brd3	ENSMUST00000138693	ENSMUSP00000115755	TRANSLATION	protein_coding	stop	-	5	682	0	6.1	0	243	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026918	Brd3	ENSMUST00000130932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026918	Brd3	ENSMUST00000126059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026918	Brd3	ENSMUST00000113941	ENSMUSP00000109574	TRANSLATION	protein_coding	-	CCDS50546.1	5	743	0	6.1	0.5	243	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000026918	Brd3	ENSMUST00000028282	ENSMUSP00000028282	TRANSLATION	protein_coding	-	CCDS15828.1	5	726	0	6.1	0.5	243	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026918	Brd3	ENSMUST00000164296	ENSMUSP00000128812	TRANSLATION	protein_coding	-	CCDS15828.1	5	726	0	6.1	0.5	243	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000026918	Brd3	ENSMUST00000147736	ENSMUSP00000122009	TRANSLATION	protein_coding	stop	-	3	90	0	1.75	0	38.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036053	Fmnl2	ENSMUST00000127122	ENSMUSP00000118658	TRANSLATION	protein_coding	-	-	5	1086	0	20.45	2.4	617.7	0	-4,-5	-	-	12.452	ALTERNATIVE:2
ENSMUSG00000036053	Fmnl2	ENSMUST00000090952	ENSMUSP00000088472	TRANSLATION	protein_coding	-	-	5	1091	0	20.45	2.9	617.7	0	-4,-5	-	-	12.613	ALTERNATIVE:2
ENSMUSG00000036053	Fmnl2	ENSMUST00000155586	ENSMUSP00000117822	TRANSLATION	protein_coding	-	-	1	1085	0	20.45	0.5	617.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036053	Fmnl2	ENSMUST00000050719	ENSMUSP00000057084	TRANSLATION	protein_coding	-	-	5	1034	0	20.45	0	617.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036053	Fmnl2	ENSMUST00000049483	ENSMUSP00000047260	TRANSLATION	protein_coding	-	CCDS38124.1	5	1083	0	20.45	4.1	617.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000027394	Ttl	ENSMUST00000144120	ENSMUSP00000117506	TRANSLATION	protein_coding	start	-	1	199	16	3.5	0	207.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027394	Ttl	ENSMUST00000035812	ENSMUSP00000046883	TRANSLATION	protein_coding	-	CCDS16719.1	1	377	17	7.25	13.6	236.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027394	Ttl	ENSMUST00000144730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049950	Rpp38	ENSMUST00000062672	ENSMUSP00000050992	TRANSLATION	protein_coding	-	CCDS15645.1	1	280	0	0	0.5	51.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000074704	Rad21l	ENSMUST00000180195	ENSMUSP00000136918	TRANSLATION	protein_coding	-	CCDS50747.2	1	552	0	2.92	1.5	186.5	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000074704	Rad21l	ENSMUST00000096439	ENSMUSP00000094174	TRANSLATION	protein_coding	-	-	5	549	0	2.92	1.5	186.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000050645	Defb19	ENSMUST00000053180	ENSMUSP00000059585	TRANSLATION	protein_coding	-	CCDS38277.1	1	83	0	0	1.5	29.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000070953	Rabepk	ENSMUST00000118108	ENSMUSP00000113099	TRANSLATION	protein_coding	-	-	5	372	0	3.428	3.9	135.8	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000070953	Rabepk	ENSMUST00000047963	ENSMUSP00000037746	TRANSLATION	nonsense_mediated_decay	start	-	3	64	0	0.395	0	42.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070953	Rabepk	ENSMUST00000144113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070953	Rabepk	ENSMUST00000141099	ENSMUSP00000120887	TRANSLATION	nonsense_mediated_decay	-	-	3	76	0	0.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070953	Rabepk	ENSMUST00000145903	ENSMUSP00000122360	TRANSLATION	protein_coding	-	CCDS15951.1	1	380	0	3.428	0.5	135.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000070953	Rabepk	ENSMUST00000113086	ENSMUSP00000108709	TRANSLATION	protein_coding	-	-	5	321	0	2.813	2.4	106.1	0	-4,-5	-	-	9.471	MINOR
ENSMUSG00000070953	Rabepk	ENSMUST00000140663	ENSMUSP00000122119	TRANSLATION	nonsense_mediated_decay	-	-	2	52	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075159	Olfr1110	ENSMUST00000152758	ENSMUSP00000149495	TRANSLATION	protein_coding	-	CCDS16282.1	2	312	0	0.2	2.8	179.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075159	Olfr1110	ENSMUST00000099861	ENSMUSP00000097447	TRANSLATION	protein_coding	-	CCDS16282.1	-	312	0	0.2	2.8	179.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027091	Zc3h15	ENSMUST00000081591	ENSMUSP00000080301	TRANSLATION	protein_coding	-	CCDS16180.1	1	426	8	0	1.5	110.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027091	Zc3h15	ENSMUST00000125422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027091	Zc3h15	ENSMUST00000145099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027091	Zc3h15	ENSMUST00000130948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027091	Zc3h15	ENSMUST00000134789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027091	Zc3h15	ENSMUST00000140086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027091	Zc3h15	ENSMUST00000142756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027131	Emc4	ENSMUST00000028551	ENSMUSP00000028551	TRANSLATION	protein_coding	-	CCDS16553.1	1	183	0	0	10.8	155.6	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000027131	Emc4	ENSMUST00000153967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087006	Gm13889	ENSMUST00000148314	ENSMUSP00000141051	TRANSLATION	protein_coding	-	CCDS79830.1	-	123	3	0	8.2	179.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000087006	Gm13889	ENSMUST00000099689	ENSMUSP00000140709	TRANSLATION	protein_coding	-	-	-	246	3	0	1	179.2	0	-4,-2	-	-	9	MINOR
ENSMUSG00000103766	Gm38392	ENSMUST00000165196	ENSMUSP00000132187	TRANSLATION	protein_coding,RT	start	-	5	434	5	7.79	0	279	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000103766	Gm38392	ENSMUST00000163277	ENSMUSP00000141315	TRANSLATION	nonsense_mediated_decay,RT	start	-	1	48	0	0	0	49.2	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000102692	Dchs2	ENSMUST00000191829	ENSMUSP00000141425	TRANSLATION	protein_coding	-	-	5	3346	204	8.58	0	1224.9	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000090817	Gm4450	ENSMUST00000167753	ENSMUSP00000127882	TRANSLATION	protein_coding	-	-	1	373	26	1.92	1.5	348.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000090817	Gm4450	ENSMUST00000188356	ENSMUSP00000139967	TRANSLATION	protein_coding	stop	-	2	191	26	1.8	0	227.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027599	Armc1	ENSMUST00000029125	ENSMUSP00000029125	TRANSLATION	protein_coding	-	CCDS17255.1	1	282	0	0	10.8	21.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000038612	Mcl1	ENSMUST00000178686	ENSMUSP00000135915	TRANSLATION	protein_coding	-	-	1	285	0	3	0	91.9	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038612	Mcl1	ENSMUST00000037947	ENSMUSP00000044048	TRANSLATION	protein_coding	-	CCDS57236.1	1	331	0	3	0.5	91.9	1	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000027776	Il12a	ENSMUST00000195408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027776	Il12a	ENSMUST00000029345	ENSMUSP00000029345	TRANSLATION	protein_coding	-	-	5	236	0	4.42	0.5	343.1	0	1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027776	Il12a	ENSMUST00000191910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027776	Il12a	ENSMUST00000192812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027776	Il12a	ENSMUST00000107816	ENSMUSP00000103446	TRANSLATION	protein_coding	-	CCDS17400.1	1	215	0	4.42	1.5	343.1	0	4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000027776	Il12a	ENSMUST00000195517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028148	Them5	ENSMUST00000029794	ENSMUSP00000029794	TRANSLATION	protein_coding	-	CCDS17590.1	1	248	10	4.7	5.1	21.8	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000028148	Them5	ENSMUST00000198083	ENSMUSP00000142808	TRANSLATION	protein_coding	-	-	5	301	10	4.2	0	21.8	0	-4,0	-	-	16.998	MINOR
ENSMUSG00000004897	Hdgf	ENSMUST00000160198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004897	Hdgf	ENSMUST00000162631	ENSMUSP00000123832	TRANSLATION	nonsense_mediated_decay	-	-	3	84	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004897	Hdgf	ENSMUST00000159492	ENSMUSP00000124803	TRANSLATION	protein_coding	stop	-	3	202	0	1.95	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004897	Hdgf	ENSMUST00000161616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004897	Hdgf	ENSMUST00000160312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004897	Hdgf	ENSMUST00000005017	ENSMUSP00000005017	TRANSLATION	protein_coding	-	CCDS17457.1	1	237	0	2.7	1.5	56.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028064	Sema4a	ENSMUST00000125526	ENSMUSP00000119028	TRANSLATION	protein_coding	stop	-	3	113	0	1.75	0	30.4	0	1,-2	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000165898	ENSMUSP00000128510	TRANSLATION	protein_coding	-	CCDS17475.1	5	760	0	10.329	1.5	460.5	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028064	Sema4a	ENSMUST00000146921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028064	Sema4a	ENSMUST00000184972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028064	Sema4a	ENSMUST00000169222	ENSMUSP00000128887	TRANSLATION	protein_coding	-	CCDS17475.1	5	760	0	10.329	1.5	460.5	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028064	Sema4a	ENSMUST00000184876	ENSMUSP00000139159	TRANSLATION	nonsense_mediated_decay	-	-	5	180	0	3.212	0	99.2	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000149145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028064	Sema4a	ENSMUST00000156108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028064	Sema4a	ENSMUST00000107531	ENSMUSP00000103155	TRANSLATION	protein_coding	-	-	5	628	0	8.079	0	349.4	1	-4,-5	-	-	1.5	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000184487	ENSMUSP00000139126	TRANSLATION	nonsense_mediated_decay	-	-	5	170	0	3.212	0	98.5	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000166237	ENSMUSP00000125909	TRANSLATION	protein_coding	-	CCDS17475.1	1	760	0	10.329	1.5	460.5	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028064	Sema4a	ENSMUST00000029700	ENSMUSP00000029700	TRANSLATION	protein_coding	-	CCDS17475.1	1	760	0	10.329	1.5	460.5	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028064	Sema4a	ENSMUST00000127436	ENSMUSP00000118706	TRANSLATION	protein_coding	stop	-	3	233	0	4.909	0	158.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000135732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028064	Sema4a	ENSMUST00000135539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028064	Sema4a	ENSMUST00000141471	ENSMUSP00000114330	TRANSLATION	protein_coding	stop	-	5	60	0	0.15	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000185137	ENSMUSP00000138858	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0.849	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000147200	ENSMUSP00000123061	TRANSLATION	protein_coding	stop	-	5	203	0	4.429	0	139.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028064	Sema4a	ENSMUST00000123753	ENSMUSP00000120084	TRANSLATION	protein_coding	stop	-	2	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037062	Sh3glb1	ENSMUST00000199350	ENSMUSP00000143031	TRANSLATION	protein_coding	start	-	3	140	0	2.15	0	57.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037062	Sh3glb1	ENSMUST00000163279	ENSMUSP00000129800	TRANSLATION	protein_coding	-	CCDS17885.1	1	365	0	6.29	6.3	321	0	-4,-5	-	-	13.802	PRINCIPAL:1
ENSMUSG00000037062	Sh3glb1	ENSMUST00000198254	ENSMUSP00000143312	TRANSLATION	protein_coding	-	CCDS80043.1	1	386	0	6.125	5.1	317	0	-4,-5	-	-	12.78	MINOR
ENSMUSG00000037062	Sh3glb1	ENSMUST00000200532	ENSMUSP00000142626	TRANSLATION	protein_coding	start/stop	-	3	194	0	2.6	0	95.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037062	Sh3glb1	ENSMUST00000199854	ENSMUSP00000142716	TRANSLATION	protein_coding	-	-	5	394	0	6.39	2.4	312.9	0	-4,-5	-	-	12.042	MINOR
ENSMUSG00000037062	Sh3glb1	ENSMUST00000199531	ENSMUSP00000143433	TRANSLATION	protein_coding	-	CCDS80042.1	1	355	0	5.96	0.5	279.7	0	-4,-5	-	-	8.664	MINOR
ENSMUSG00000040724	Kcna2	ENSMUST00000196403	ENSMUSP00000142873	TRANSLATION	protein_coding	-	CCDS17733.1	5	499	0	1	11	270.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040724	Kcna2	ENSMUST00000197470	ENSMUSP00000143798	TRANSLATION	protein_coding	-	CCDS17733.1	5	499	0	1	11	270.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040724	Kcna2	ENSMUST00000038695	ENSMUSP00000041702	TRANSLATION	protein_coding	-	CCDS17733.1	1	499	0	1	11	270.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068749	Psma5	ENSMUST00000090569	ENSMUSP00000088057	TRANSLATION	protein_coding	-	CCDS17755.1	1	241	4	7.08	21.5	239.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000068749	Psma5	ENSMUST00000129708	ENSMUSP00000143081	TRANSLATION	nonsense_mediated_decay	start	-	2	55	0	1.3292	0	28.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027869	Hsd3b6	ENSMUST00000029463	ENSMUSP00000029463	TRANSLATION	protein_coding	-	CCDS17669.1	1	373	27	1.7	5.1	373.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000027869	Hsd3b6	ENSMUST00000196706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027869	Hsd3b6	ENSMUST00000170847	ENSMUSP00000129911	TRANSLATION	protein_coding	-	CCDS17669.1	1	373	27	1.7	5.1	373.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000027719	Adad1	ENSMUST00000029274	ENSMUSP00000029274	TRANSLATION	protein_coding	-	-	5	548	16	4.67	0	314.7	0	-4,-6	-	-	15.528	MINOR
ENSMUSG00000027719	Adad1	ENSMUST00000144629	ENSMUSP00000115260	TRANSLATION	protein_coding	-	CCDS17315.1	1	619	16	4.901	1.5	348.2	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000027719	Adad1	ENSMUST00000148157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027719	Adad1	ENSMUST00000147773	ENSMUSP00000121015	TRANSLATION	protein_coding	start	-	3	201	9	2.27	0	164.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027719	Adad1	ENSMUST00000141736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027803	Wwtr1	ENSMUST00000120977	ENSMUSP00000113040	TRANSLATION	protein_coding	-	CCDS50912.1	1	452	0	1.2	0.5	31.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027803	Wwtr1	ENSMUST00000029380	ENSMUSP00000029380	TRANSLATION	protein_coding	-	CCDS38434.1	1	395	0	1.2	1.5	31.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027859	Ngf	ENSMUST00000035952	ENSMUSP00000040345	TRANSLATION	protein_coding	-	CCDS51025.1	2	241	0	1	7.5	169.3	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000027859	Ngf	ENSMUST00000198168	ENSMUSP00000143428	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027859	Ngf	ENSMUST00000106925	ENSMUSP00000102538	TRANSLATION	protein_coding	-	CCDS17687.1	1	307	0	1	0.5	169.3	0	-4,-7	-	-	12	MINOR
ENSMUSG00000027859	Ngf	ENSMUST00000198644	ENSMUSP00000142801	TRANSLATION	protein_coding	-	-	5	303	0	1	0	169.3	0	0,-2	-	-	12	MINOR
ENSMUSG00000090268	Spopfm3	ENSMUST00000159524	ENSMUSP00000125267	TRANSLATION	protein_coding	-	-	5	357	0	1	0	101.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028197	Col24a1	ENSMUST00000127379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028197	Col24a1	ENSMUST00000139001	ENSMUSP00000119736	TRANSLATION	protein_coding	stop	-	3	62	3	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028197	Col24a1	ENSMUST00000142441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028197	Col24a1	ENSMUST00000029848	ENSMUSP00000029848	TRANSLATION	protein_coding	-	CCDS17892.1	1	1733	4	23.97	0.5	452.2	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000118504	4933434E20Rik	ENSMUST00000239082	ENSMUSP00000159175	TRANSLATION	nonsense_mediated_decay,RT	start	-	-	30	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000118504	4933434E20Rik	ENSMUST00000239076	ENSMUSP00000159150	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	253	0	0	11.6	256.9	0	-3,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000014599	Csf1	ENSMUST00000156820	ENSMUSP00000119553	TRANSLATION	protein_coding	start/stop	-	3	278	0	1.62	0	103.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014599	Csf1	ENSMUST00000014743	ENSMUSP00000014743	TRANSLATION	protein_coding	-	CCDS17740.1	1	552	0	4.25	0.5	306.5	1	3,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000014599	Csf1	ENSMUST00000118593	ENSMUSP00000113136	TRANSLATION	protein_coding	-	CCDS51044.1	1	257	0	4.25	2.9	306.5	1	3,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000014599	Csf1	ENSMUST00000120654	ENSMUSP00000112832	TRANSLATION	protein_coding	-	-	3	163	0	1.62	0	103.6	1	-4,-5	-	-	0.738	MINOR
ENSMUSG00000014599	Csf1	ENSMUST00000153114	ENSMUSP00000115480	TRANSLATION	protein_coding	stop	-	2	182	0	3.5	0	253.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014599	Csf1	ENSMUST00000155557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014599	Csf1	ENSMUST00000120243	ENSMUSP00000113617	TRANSLATION	protein_coding	-	CCDS17740.1	1	552	0	4.25	0.5	306.5	1	3,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000027531	Impa1	ENSMUST00000118410	ENSMUSP00000113860	TRANSLATION	protein_coding	-	-	1	276	10	6.45	0	262.2	0	-4,-5	-	-	15.072	MINOR
ENSMUSG00000027531	Impa1	ENSMUST00000128912	ENSMUSP00000116088	TRANSLATION	protein_coding	stop	-	5	89	2	2.32	0	50.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027531	Impa1	ENSMUST00000191670	ENSMUSP00000141345	TRANSLATION	protein_coding	-	CCDS79884.1	2	208	7	4.45	0.5	170.6	0	-4,-5	-	-	4.242	MINOR
ENSMUSG00000027531	Impa1	ENSMUST00000065938	ENSMUSP00000068174	TRANSLATION	protein_coding	-	CCDS17240.1	1	277	10	7.33	8.3	281.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027531	Impa1	ENSMUST00000195155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028023	Pitx2	ENSMUST00000187145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028023	Pitx2	ENSMUST00000172645	ENSMUSP00000134692	TRANSLATION	protein_coding	-	CCDS71316.1	1	304	0	2.3	0.5	113.5	0	-4,-5	-	-	11.52	MINOR
ENSMUSG00000028023	Pitx2	ENSMUST00000106382	ENSMUSP00000101990	TRANSLATION	protein_coding	-	CCDS38630.1	1	271	0	1.9	14	113.5	0	-4,-5	-	-	14.56	ALTERNATIVE:1
ENSMUSG00000028023	Pitx2	ENSMUST00000174623	ENSMUSP00000139328	TRANSLATION	protein_coding	-	-	2	164	0	1.35	0	54.5	0	-4,-7	-	-	5.7	MINOR
ENSMUSG00000028023	Pitx2	ENSMUST00000173645	ENSMUSP00000134301	TRANSLATION	protein_coding	stop	-	5	61	0	0.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028023	Pitx2	ENSMUST00000029657	ENSMUSP00000029657	TRANSLATION	protein_coding	-	-	5	99	0	0.7	0	0	0	-4,-7	-	-	1.68	MINOR
ENSMUSG00000028023	Pitx2	ENSMUST00000174661	ENSMUSP00000133756	TRANSLATION	protein_coding	-	CCDS17830.1	1	317	0	2.5	8.5	113.5	0	-4,-5	-	-	14.308	PRINCIPAL:3
ENSMUSG00000028023	Pitx2	ENSMUST00000042587	ENSMUSP00000047359	TRANSLATION	protein_coding	-	CCDS38631.1	1	324	0	2	7.5	113.5	0	-4,-7	-	-	12.8	MINOR
ENSMUSG00000000340	Dbt	ENSMUST00000196376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000340	Dbt	ENSMUST00000000349	ENSMUSP00000000349	TRANSLATION	protein_coding	-	CCDS17787.1	1	482	24	9	2.7	394.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000000340	Dbt	ENSMUST00000199614	ENSMUSP00000143713	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000000340	Dbt	ENSMUST00000197201	ENSMUSP00000143696	TRANSLATION	protein_coding	stop	-	3	27	0	0.75	0	40.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005687	Bcas2	ENSMUST00000155520	ENSMUSP00000116250	TRANSLATION	nonsense_mediated_decay	-	-	2	88	0	1.15	0	22.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005687	Bcas2	ENSMUST00000147042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005687	Bcas2	ENSMUST00000135017	ENSMUSP00000122413	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	2.3	0	58.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005687	Bcas2	ENSMUST00000005830	ENSMUSP00000005830	TRANSLATION	protein_coding	-	CCDS17691.1	1	225	0	6	21.5	273.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005687	Bcas2	ENSMUST00000136937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005687	Bcas2	ENSMUST00000139489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044167	Foxo1	ENSMUST00000053764	ENSMUSP00000055308	TRANSLATION	protein_coding	-	CCDS17343.1	1	652	0	1	1.5	258.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068922	Msto1	ENSMUST00000107494	ENSMUSP00000103118	TRANSLATION	protein_coding	-	-	1	586	0	0	0	85.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000068922	Msto1	ENSMUST00000147828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068922	Msto1	ENSMUST00000126245	ENSMUSP00000115645	TRANSLATION	protein_coding	-	CCDS17485.1	1	556	0	0	1.5	190.2	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068922	Msto1	ENSMUST00000137243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068922	Msto1	ENSMUST00000128988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043300	B3galnt1	ENSMUST00000061826	ENSMUSP00000058363	TRANSLATION	protein_coding	-	CCDS17406.1	1	331	0	0	7.5	221.4	0	-1,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000015750	Aph1a	ENSMUST00000056710	ENSMUSP00000058846	TRANSLATION	protein_coding	-	CCDS50999.1	1	265	0	7	11.5	312.5	7	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000015750	Aph1a	ENSMUST00000197232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015750	Aph1a	ENSMUST00000197081	ENSMUSP00000142972	TRANSLATION	protein_coding	stop	-	5	49	0	1	0	50.5	1	0,-3	-	-	-1	MINOR
ENSMUSG00000015750	Aph1a	ENSMUST00000015894	ENSMUSP00000015894	TRANSLATION	protein_coding	-	CCDS17624.1	1	247	0	6.25	6.3	312.5	7	-2,-5	-	-	12.015	MINOR
ENSMUSG00000063273	Naa15	ENSMUST00000192419	ENSMUSP00000141965	TRANSLATION	protein_coding	stop	-	5	126	0	3	0	24.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063273	Naa15	ENSMUST00000193694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063273	Naa15	ENSMUST00000192523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063273	Naa15	ENSMUST00000192197	ENSMUSP00000141886	TRANSLATION	protein_coding	start/stop	-	3	237	0	4.23	0	152.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063273	Naa15	ENSMUST00000193266	ENSMUSP00000141433	TRANSLATION	protein_coding	-	-	1	815	0	11.6	1.2	760.1	0	-4,-5	-	-	9.996	MINOR
ENSMUSG00000063273	Naa15	ENSMUST00000029303	ENSMUSP00000029303	TRANSLATION	protein_coding	-	CCDS17340.1	1	865	0	12.625	18.3	760.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000063273	Naa15	ENSMUST00000195430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063273	Naa15	ENSMUST00000193267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063273	Naa15	ENSMUST00000194685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048455	Sprr1b	ENSMUST00000062160	ENSMUSP00000058617	TRANSLATION	protein_coding	-	CCDS17557.1	1	153	0	0	1.5	207.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027848	Olfml3	ENSMUST00000157042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027848	Olfml3	ENSMUST00000169286	ENSMUSP00000142417	TRANSLATION	protein_coding	-	-	-	47	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027848	Olfml3	ENSMUST00000029440	ENSMUSP00000029440	TRANSLATION	protein_coding	-	CCDS17693.1	1	406	0	1.26	6.5	254.9	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000027848	Olfml3	ENSMUST00000154145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032913	Lrig2	ENSMUST00000046316	ENSMUSP00000035999	TRANSLATION	protein_coding	-	CCDS17701.1	1	1054	5	12.245	1.5	386.5	1	1,-3	-	-	17	PRINCIPAL:3
ENSMUSG00000032913	Lrig2	ENSMUST00000196518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032913	Lrig2	ENSMUST00000199070	ENSMUSP00000142373	TRANSLATION	protein_coding	-	-	1	689	5	4.22	0	193.9	1	1,-3	-	-	5	MINOR
ENSMUSG00000032913	Lrig2	ENSMUST00000199180	ENSMUSP00000143406	TRANSLATION	protein_coding	start	-	2	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032913	Lrig2	ENSMUST00000198332	ENSMUSP00000142540	TRANSLATION	protein_coding	-	CCDS79993.1	1	1047	5	12.245	1.5	386.5	1	1,-3	-	-	17	ALTERNATIVE:2
ENSMUSG00000032913	Lrig2	ENSMUST00000197018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032913	Lrig2	ENSMUST00000198089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032913	Lrig2	ENSMUST00000200453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032913	Lrig2	ENSMUST00000198452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005968	Tuft1	ENSMUST00000006123	ENSMUSP00000006123	TRANSLATION	protein_coding	-	CCDS17595.1	1	390	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:3
ENSMUSG00000005968	Tuft1	ENSMUST00000196733	ENSMUSP00000143278	TRANSLATION	protein_coding	-	CCDS79975.1	1	365	0	0	5.1	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000005968	Tuft1	ENSMUST00000196496	ENSMUSP00000143416	TRANSLATION	nonsense_mediated_decay	-	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005968	Tuft1	ENSMUST00000196655	ENSMUSP00000142537	TRANSLATION	protein_coding	-	-	5	335	0	0	1.2	0	0	-4,-6	-	-	0.098	MINOR
ENSMUSG00000005968	Tuft1	ENSMUST00000200407	ENSMUSP00000143473	TRANSLATION	protein_coding	stop	-	5	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005968	Tuft1	ENSMUST00000198456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050315	Synpo2	ENSMUST00000106426	ENSMUSP00000102034	TRANSLATION	protein_coding	-	CCDS51063.1	1	1257	0	1.8	0.5	41.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000050315	Synpo2	ENSMUST00000184403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050315	Synpo2	ENSMUST00000051443	ENSMUSP00000051570	TRANSLATION	protein_coding	-	-	-	702	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000050315	Synpo2	ENSMUST00000184590	ENSMUSP00000142426	TRANSLATION	protein_coding	start	-	1	185	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000050315	Synpo2	ENSMUST00000139160	ENSMUSP00000123396	TRANSLATION	protein_coding	start	-	3	216	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050315	Synpo2	ENSMUST00000106427	ENSMUSP00000102035	TRANSLATION	protein_coding	-	-	5	1198	0	1.8	0	41.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000050315	Synpo2	ENSMUST00000198584	ENSMUSP00000142508	TRANSLATION	protein_coding	-	-	5	1087	0	1.8	0	41.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023057	Fabp2	ENSMUST00000023820	ENSMUSP00000023820	TRANSLATION	protein_coding	-	CCDS17813.1	1	132	24	3.25	15.8	61.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036894	Rap2b	ENSMUST00000049064	ENSMUSP00000038841	TRANSLATION	protein_coding	-	CCDS17378.1	-	183	24	1	18.3	189.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000028156	Eif4e	ENSMUST00000196990	ENSMUSP00000143104	TRANSLATION	protein_coding	-	CCDS84679.1	3	132	0	3.33	0.5	128.4	0	-4,-5	-	-	2.916	MINOR
ENSMUSG00000028156	Eif4e	ENSMUST00000198252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028156	Eif4e	ENSMUST00000200100	ENSMUSP00000143772	TRANSLATION	protein_coding	-	-	3	185	0	4.99	1	140.2	0	-4,-5	-	-	6.948	MINOR
ENSMUSG00000028156	Eif4e	ENSMUST00000200020	ENSMUSP00000143690	TRANSLATION	protein_coding	stop	-	1	183	0	4.99	0	181.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028156	Eif4e	ENSMUST00000200239	ENSMUSP00000143481	TRANSLATION	protein_coding	-	-	5	79	0	2.33	0	36.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028156	Eif4e	ENSMUST00000029803	ENSMUSP00000029803	TRANSLATION	protein_coding	-	CCDS38654.1	5	217	0	5.99	15.7	191.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000068740	Celsr2	ENSMUST00000147251	ENSMUSP00000122329	TRANSLATION	protein_coding	start	-	1	900	0	2.94	0	422.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068740	Celsr2	ENSMUST00000126349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068740	Celsr2	ENSMUST00000147565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068740	Celsr2	ENSMUST00000090558	ENSMUSP00000088046	TRANSLATION	protein_coding	-	CCDS17759.1	1	2919	87	9.695	1.5	1216.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000068740	Celsr2	ENSMUST00000126935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068740	Celsr2	ENSMUST00000130941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068740	Celsr2	ENSMUST00000133216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043850	Clrn1	ENSMUST00000055636	ENSMUSP00000052254	TRANSLATION	protein_coding	-	CCDS38439.1	1	250	0	0	0.5	0	3	1,-3	-	-	0	MINOR
ENSMUSG00000043850	Clrn1	ENSMUST00000051408	ENSMUSP00000051738	TRANSLATION	protein_coding	-	CCDS38438.1	1	232	0	0	10.8	0	3	1,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000043850	Clrn1	ENSMUST00000161419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043850	Clrn1	ENSMUST00000072551	ENSMUSP00000072363	TRANSLATION	protein_coding	-	CCDS17369.1	1	172	0	0	0.5	0	1	1,-3	-	-	0	MINOR
ENSMUSG00000078742	Gm10985	ENSMUST00000108014	ENSMUSP00000103649	TRANSLATION	protein_coding	start/stop	-	5	27	0	0	0	0	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000027788	Otol1	ENSMUST00000053013	ENSMUSP00000057607	TRANSLATION	protein_coding	-	CCDS17409.1	1	482	0	1.88	1.5	172.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041237	Pklr	ENSMUST00000148097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041237	Pklr	ENSMUST00000047111	ENSMUSP00000035417	TRANSLATION	protein_coding	-	CCDS17489.1	1	574	52	11.5	3.9	644.8	0	-4,-5	-	-	19.074	PRINCIPAL:3
ENSMUSG00000041237	Pklr	ENSMUST00000127058	ENSMUSP00000119392	TRANSLATION	protein_coding	stop	-	2	72	13	2.33	0	75.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041237	Pklr	ENSMUST00000107482	ENSMUSP00000103106	TRANSLATION	protein_coding	-	CCDS50957.1	1	543	52	11.5	6.4	644.8	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000041237	Pklr	ENSMUST00000151591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052430	Bmpr1b	ENSMUST00000131273	ENSMUSP00000117478	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052430	Bmpr1b	ENSMUST00000029948	ENSMUSP00000029948	TRANSLATION	protein_coding	-	CCDS17874.1	1	502	19	9.68	12.8	234.4	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052430	Bmpr1b	ENSMUST00000106232	ENSMUSP00000101839	TRANSLATION	protein_coding	-	CCDS17874.1	1	502	19	9.68	12.8	234.4	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052430	Bmpr1b	ENSMUST00000106230	ENSMUSP00000101837	TRANSLATION	protein_coding	-	CCDS17874.1	1	502	19	9.68	12.8	234.4	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052430	Bmpr1b	ENSMUST00000098568	ENSMUSP00000096167	TRANSLATION	protein_coding	-	CCDS17874.1	1	502	19	9.68	12.8	234.4	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028106	Rprd2	ENSMUST00000090791	ENSMUSP00000088297	TRANSLATION	protein_coding	-	CCDS38549.1	1	1469	0	4.15	0.5	97.7	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000028106	Rprd2	ENSMUST00000198741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028106	Rprd2	ENSMUST00000198740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028106	Rprd2	ENSMUST00000197449	ENSMUSP00000143240	TRANSLATION	protein_coding	-	-	1	473	0	4.15	0	97.7	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028106	Rprd2	ENSMUST00000200164	ENSMUSP00000143333	TRANSLATION	protein_coding	start	-	1	1386	0	3	0	97.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028106	Rprd2	ENSMUST00000200428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049940	Pgrmc2	ENSMUST00000124636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049940	Pgrmc2	ENSMUST00000058578	ENSMUSP00000056643	TRANSLATION	protein_coding	-	CCDS50899.1	1	217	0	2.4	1.5	51.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074344	Tmigd3	ENSMUST00000198080	ENSMUSP00000143300	TRANSLATION	protein_coding	-	CCDS38582.1	5	209	0	0.48	1.5	0	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000074344	Tmigd3	ENSMUST00000199107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074344	Tmigd3	ENSMUST00000197907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074344	Tmigd3	ENSMUST00000010279	ENSMUSP00000010279	TRANSLATION	protein_coding	-	CCDS38582.1	1	209	0	0.48	1.5	0	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000074344	Tmigd3	ENSMUST00000200482	ENSMUSP00000142695	TRANSLATION	nonsense_mediated_decay	-	-	5	131	0	0.48	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000074344	Tmigd3	ENSMUST00000199977	ENSMUSP00000142671	TRANSLATION	protein_coding	-	-	1	206	0	0.48	1.5	0	1	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000028360	Slc44a5	ENSMUST00000239250	ENSMUSP00000159268	TRANSLATION	protein_coding	-	-	-	721	0	0	0	353.2	9	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028360	Slc44a5	ENSMUST00000144677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028360	Slc44a5	ENSMUST00000089948	ENSMUSP00000087394	TRANSLATION	protein_coding	-	CCDS38679.1	1	710	0	0	0.5	350.9	9	-4,-7	-	-	5.862	PRINCIPAL:2
ENSMUSG00000028360	Slc44a5	ENSMUST00000128362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059994	Fcrl1	ENSMUST00000194786	ENSMUSP00000142286	TRANSLATION	protein_coding	-	CCDS79937.1	1	324	0	1.23	0.5	37.9	2	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000059994	Fcrl1	ENSMUST00000167200	ENSMUSP00000128235	TRANSLATION	protein_coding	-	CCDS50942.1	1	300	0	1.23	0.5	37.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000059994	Fcrl1	ENSMUST00000163661	ENSMUSP00000130936	TRANSLATION	protein_coding	-	CCDS50941.1	1	363	0	1.23	0.5	37.9	2	-2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000059994	Fcrl1	ENSMUST00000072480	ENSMUSP00000072300	TRANSLATION	protein_coding	-	CCDS17452.1	1	343	0	1.23	0.5	37.9	2	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000059994	Fcrl1	ENSMUST00000193854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059994	Fcrl1	ENSMUST00000191666	ENSMUSP00000141916	TRANSLATION	protein_coding	-	-	1	208	0	1.23	0	37.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000056900	Usp13	ENSMUST00000108228	ENSMUSP00000103863	TRANSLATION	protein_coding	-	-	1	857	4	18.39	1.5	298.9	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000056900	Usp13	ENSMUST00000072312	ENSMUSP00000072155	TRANSLATION	protein_coding	-	CCDS17301.1	1	858	4	18.345	1.5	298.9	0	-4,-2	-	-	15.91	PRINCIPAL:2
ENSMUSG00000056900	Usp13	ENSMUST00000172481	ENSMUSP00000133823	TRANSLATION	nonsense_mediated_decay	-	-	5	534	4	10.715	0	126.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056900	Usp13	ENSMUST00000156769	ENSMUSP00000117605	TRANSLATION	protein_coding	start	-	5	188	0	3.55	0	113	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102758	Naaladl2	ENSMUST00000203997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102758	Naaladl2	ENSMUST00000203414	ENSMUSP00000144706	TRANSLATION	protein_coding	-	CCDS84612.1	5	795	4	6.3	1.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000102758	Naaladl2	ENSMUST00000192246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102758	Naaladl2	ENSMUST00000204227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046280	She	ENSMUST00000050401	ENSMUSP00000059658	TRANSLATION	protein_coding	-	CCDS17518.1	1	492	0	1.76	0.5	56.3	0	-1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000046280	She	ENSMUST00000197454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050947	Amigo1	ENSMUST00000106661	ENSMUSP00000102272	TRANSLATION	protein_coding	start	-	2	206	0	1.5	0	23.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000050947	Amigo1	ENSMUST00000106656	ENSMUSP00000102267	TRANSLATION	protein_coding	-	CCDS17753.1	1	492	0	2.5	7.5	87	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000050947	Amigo1	ENSMUST00000050909	ENSMUSP00000061244	TRANSLATION	protein_coding	-	CCDS17753.1	1	492	0	2.5	7.5	87	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000050947	Amigo1	ENSMUST00000155782	ENSMUSP00000142852	TRANSLATION	protein_coding	start	-	3	188	0	1	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000050947	Amigo1	ENSMUST00000106659	ENSMUSP00000102270	TRANSLATION	protein_coding	-	CCDS71305.1	1	309	0	1.6	1.5	58.5	0	4,-1	-	-	8.103	MINOR
ENSMUSG00000027805	Pfn2	ENSMUST00000122210	ENSMUSP00000113526	TRANSLATION	protein_coding	-	-	3	91	0	2	1.2	48.2	0	-4,-5	-	-	7.038	MINOR
ENSMUSG00000027805	Pfn2	ENSMUST00000066882	ENSMUSP00000068890	TRANSLATION	protein_coding	-	CCDS17364.1	1	140	0	3	18.3	96.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027805	Pfn2	ENSMUST00000119344	ENSMUSP00000112391	TRANSLATION	protein_coding	-	-	1	91	0	2	1.2	48.2	0	-4,-5	-	-	7.038	MINOR
ENSMUSG00000027805	Pfn2	ENSMUST00000120289	ENSMUSP00000112443	TRANSLATION	protein_coding	-	-	2	110	0	2	0	67.1	0	-4,-5	-	-	8.16	MINOR
ENSMUSG00000008601	Rab25	ENSMUST00000008745	ENSMUSP00000008745	TRANSLATION	protein_coding	-	CCDS17477.1	1	213	24	5.2	8.8	189.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000008601	Rab25	ENSMUST00000149724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008601	Rab25	ENSMUST00000131775	ENSMUSP00000120505	TRANSLATION	protein_coding	stop	-	3	138	11	3.25	0	131	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008601	Rab25	ENSMUST00000141371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028035	Dnajb4	ENSMUST00000029669	ENSMUSP00000029669	TRANSLATION	protein_coding	-	CCDS17915.1	5	337	0	3.33	13.5	245.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028035	Dnajb4	ENSMUST00000144950	ENSMUSP00000114356	TRANSLATION	protein_coding	-	CCDS17915.1	1	337	0	3.33	13.5	245.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028035	Dnajb4	ENSMUST00000196291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028035	Dnajb4	ENSMUST00000153355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028035	Dnajb4	ENSMUST00000134701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028035	Dnajb4	ENSMUST00000050073	ENSMUSP00000053916	TRANSLATION	protein_coding	-	CCDS17915.1	1	337	0	3.33	13.5	245.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028035	Dnajb4	ENSMUST00000197941	ENSMUSP00000142834	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093931	Amy2a3	ENSMUST00000179314	ENSMUSP00000136894	TRANSLATION	protein_coding	-	CCDS51055.1	1	508	48	9.8	8.8	118.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028139	Riiad1	ENSMUST00000183915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028139	Riiad1	ENSMUST00000029785	ENSMUSP00000029785	TRANSLATION	protein_coding	-	CCDS38535.1	1	119	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028139	Riiad1	ENSMUST00000184619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027936	Crtc2	ENSMUST00000149897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027936	Crtc2	ENSMUST00000135002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027936	Crtc2	ENSMUST00000184882	ENSMUSP00000139194	TRANSLATION	nonsense_mediated_decay	start	-	5	475	0	0	0	229.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027936	Crtc2	ENSMUST00000130002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027936	Crtc2	ENSMUST00000029545	ENSMUSP00000029545	TRANSLATION	protein_coding	-	CCDS38501.1	1	692	0	1	5.1	390.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027936	Crtc2	ENSMUST00000123964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027936	Crtc2	ENSMUST00000149422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027936	Crtc2	ENSMUST00000136970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027718	Il21	ENSMUST00000029273	ENSMUSP00000029273	TRANSLATION	protein_coding	-	CCDS17317.1	1	146	0	3.38	2.7	0	0	1,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000027718	Il21	ENSMUST00000196943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027718	Il21	ENSMUST00000161015	ENSMUSP00000124668	TRANSLATION	protein_coding	-	CCDS71236.1	1	162	0	3.05	0.5	0	0	1,-2	-	-	5.34	ALTERNATIVE:2
ENSMUSG00000027752	Exosc8	ENSMUST00000198780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000134892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000135935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000140935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000029316	ENSMUSP00000029316	TRANSLATION	protein_coding	-	CCDS17352.1	1	276	0	8.57	16.8	137.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027752	Exosc8	ENSMUST00000153224	ENSMUSP00000118780	TRANSLATION	protein_coding	stop	-	3	130	0	4.32	0	52.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027752	Exosc8	ENSMUST00000142377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000127112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000150923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000125632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027752	Exosc8	ENSMUST00000154787	ENSMUSP00000115876	TRANSLATION	nonsense_mediated_decay	start	-	3	114	0	3.462	0	56.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074637	Sox2	ENSMUST00000099151	ENSMUSP00000096755	TRANSLATION	protein_coding	-	CCDS38413.1	-	319	0	0.6	6.3	225.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027935	Rab13	ENSMUST00000107373	ENSMUSP00000102996	TRANSLATION	protein_coding	-	CCDS79962.1	1	121	9	3.45	4.1	101.9	0	-4,-5	-	-	2.193	MINOR
ENSMUSG00000027935	Rab13	ENSMUST00000198809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027935	Rab13	ENSMUST00000065418	ENSMUSP00000070588	TRANSLATION	protein_coding	-	CCDS17522.1	1	202	21	5.95	8.8	222.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000069072	Slc7a14	ENSMUST00000108245	ENSMUSP00000103880	TRANSLATION	protein_coding	-	-	1	677	0	1.98	0	185.8	14	-4,0	-	-	10.89	MINOR
ENSMUSG00000069072	Slc7a14	ENSMUST00000091259	ENSMUSP00000088803	TRANSLATION	protein_coding	-	CCDS17291.1	1	771	0	1.98	13.8	204.3	15	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000095788	Sirpb1a	ENSMUST00000191958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095788	Sirpb1a	ENSMUST00000099201	ENSMUSP00000096807	TRANSLATION	protein_coding	-	-	5	397	0	4.45	0	145.8	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000095788	Sirpb1a	ENSMUST00000192700	ENSMUSP00000141504	TRANSLATION	protein_coding	-	CCDS17252.1	1	391	0	4.45	0.5	145.8	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000095788	Sirpb1a	ENSMUST00000194144	ENSMUSP00000141659	TRANSLATION	protein_coding	stop	-	3	182	0	2.45	0	77.6	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000053054	Adh6a	ENSMUST00000106247	ENSMUSP00000101854	TRANSLATION	protein_coding	-	CCDS38652.1	1	375	35	7.41	1.7	66.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053054	Adh6a	ENSMUST00000013455	ENSMUSP00000013455	TRANSLATION	protein_coding	-	-	1	368	34	7.08	0	66.9	0	-4,-6	-	-	16.674	MINOR
ENSMUSG00000048655	Ccdc169	ENSMUST00000061099	ENSMUSP00000054771	TRANSLATION	protein_coding	-	CCDS17357.2	5	214	0	0	2.7	185.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000048655	Ccdc169	ENSMUST00000159904	ENSMUSP00000123900	TRANSLATION	nonsense_mediated_decay	-	-	2	82	0	0	0	106.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048655	Ccdc169	ENSMUST00000118963	ENSMUSP00000112414	TRANSLATION	protein_coding	-	-	3	207	0	0	0	185.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048655	Ccdc169	ENSMUST00000161120	ENSMUSP00000125131	TRANSLATION	nonsense_mediated_decay	-	-	2	82	0	0	0	106.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048655	Ccdc169	ENSMUST00000052904	ENSMUSP00000049698	TRANSLATION	protein_coding	-	CCDS79907.1	1	132	0	0	0.5	130.7	0	-4,-6	-	-	2.718	MINOR
ENSMUSG00000048655	Ccdc169	ENSMUST00000153009	ENSMUSP00000119909	TRANSLATION	protein_coding	stop	-	1	37	0	0	0	44.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074591	Ankub1	ENSMUST00000238789	ENSMUSP00000159008	TRANSLATION	protein_coding	-	-	-	542	0	0.48	2.2	54.7	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000074591	Ankub1	ENSMUST00000200665	ENSMUSP00000142649	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074591	Ankub1	ENSMUST00000099091	ENSMUSP00000096689	TRANSLATION	protein_coding	-	CCDS17363.1	1	192	0	0.32	0.5	21.5	0	-4,-5	-	-	6.36	MINOR
ENSMUSG00000074591	Ankub1	ENSMUST00000197088	ENSMUSP00000142589	TRANSLATION	protein_coding	-	-	5	500	0	0.48	0	54.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028047	Thbs3	ENSMUST00000029682	ENSMUSP00000029682	TRANSLATION	protein_coding	-	CCDS17495.1	1	956	126	13.78	2.7	675.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028047	Thbs3	ENSMUST00000126315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000146435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000144980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000153129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000142051	ENSMUSP00000116136	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028047	Thbs3	ENSMUST00000136881	ENSMUSP00000120337	TRANSLATION	nonsense_mediated_decay	start	-	3	104	10	1	0	40.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028047	Thbs3	ENSMUST00000119084	ENSMUSP00000112912	TRANSLATION	protein_coding	-	-	5	919	121	12.78	0	675.6	0	3,-2	-	-	12.666	MINOR
ENSMUSG00000028047	Thbs3	ENSMUST00000126372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000155924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028047	Thbs3	ENSMUST00000126700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028182	Lrriq3	ENSMUST00000029833	ENSMUSP00000029833	TRANSLATION	protein_coding	-	CCDS38682.1	1	633	0	0.88	1.5	29.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028182	Lrriq3	ENSMUST00000194376	ENSMUSP00000142127	TRANSLATION	protein_coding	-	-	1	300	0	0.88	0	29.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028182	Lrriq3	ENSMUST00000195418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028182	Lrriq3	ENSMUST00000192383	ENSMUSP00000141372	TRANSLATION	protein_coding	-	-	1	345	0	0.88	0.5	29.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027665	Pik3ca	ENSMUST00000195230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027665	Pik3ca	ENSMUST00000108242	ENSMUSP00000103877	TRANSLATION	protein_coding	-	-	1	946	20	18.25	0	665.8	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000027665	Pik3ca	ENSMUST00000029201	ENSMUSP00000029201	TRANSLATION	protein_coding	-	CCDS38409.1	1	1068	20	19.25	15.5	768.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000027665	Pik3ca	ENSMUST00000108243	ENSMUSP00000103878	TRANSLATION	protein_coding	-	CCDS38409.1	5	1068	20	19.25	15.5	768.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000043165	Lor	ENSMUST00000058150	ENSMUSP00000052128	TRANSLATION	protein_coding	-	CCDS17546.1	1	486	0	0	0.5	40.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015747	Vps45	ENSMUST00000140518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015747	Vps45	ENSMUST00000015891	ENSMUSP00000015891	TRANSLATION	protein_coding	-	CCDS17628.1	1	570	0	8.05	13	441	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000015747	Vps45	ENSMUST00000131281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028273	Pdlim5	ENSMUST00000197808	ENSMUSP00000142790	TRANSLATION	protein_coding	start/stop	-	3	253	6	1.75	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000196050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028273	Pdlim5	ENSMUST00000196220	ENSMUSP00000142460	TRANSLATION	protein_coding	-	CCDS80037.1	1	574	23	7.75	0.5	228.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000028273	Pdlim5	ENSMUST00000170361	ENSMUSP00000128752	TRANSLATION	protein_coding	-	CCDS38656.1	5	239	0	2.5	1.5	82.1	0	-4,-7	-	-	0.192	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000200043	ENSMUSP00000143343	TRANSLATION	protein_coding	-	CCDS80036.1	1	526	23	7.75	0.5	228.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000028273	Pdlim5	ENSMUST00000200650	ENSMUSP00000143762	TRANSLATION	protein_coding	start/stop	-	5	223	8	2.25	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000168967	ENSMUSP00000132647	TRANSLATION	protein_coding	-	CCDS80039.1	1	234	0	2.5	8.8	82.6	0	-4,-7	-	-	3	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000196908	ENSMUSP00000143098	TRANSLATION	protein_coding	-	CCDS17876.1	1	337	0	2.5	1.5	83.2	0	-4,-7	-	-	0.192	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000029941	ENSMUSP00000029941	TRANSLATION	protein_coding	-	CCDS17875.1	1	591	23	7.75	0.5	228.8	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000028273	Pdlim5	ENSMUST00000090134	ENSMUSP00000087595	TRANSLATION	protein_coding	-	CCDS57258.1	1	214	0	2.5	8.8	81.1	0	-4,-7	-	-	3	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000058626	ENSMUSP00000059267	TRANSLATION	protein_coding	-	-	5	239	0	2.5	1.5	82.8	0	-4,-7	-	-	0.192	MINOR
ENSMUSG00000028273	Pdlim5	ENSMUST00000198381	ENSMUSP00000142899	TRANSLATION	protein_coding	-	CCDS80035.1	5	482	23	7.75	0.5	228.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000028273	Pdlim5	ENSMUST00000195975	ENSMUSP00000142737	TRANSLATION	protein_coding	-	CCDS80038.1	1	614	23	7.75	0.5	228.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000027852	Nras	ENSMUST00000199367	ENSMUSP00000143620	TRANSLATION	protein_coding	stop	-	3	74	15	2	0	90.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027852	Nras	ENSMUST00000196355	ENSMUSP00000142438	TRANSLATION	nonsense_mediated_decay	-	-	5	189	22	4.75	21.5	194.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027852	Nras	ENSMUST00000200457	ENSMUSP00000142434	TRANSLATION	nonsense_mediated_decay	-	-	2	46	11	1	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027852	Nras	ENSMUST00000197678	ENSMUSP00000142603	TRANSLATION	protein_coding	stop	-	2	150	22	3.75	2	178.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027852	Nras	ENSMUST00000200069	ENSMUSP00000143391	TRANSLATION	protein_coding	-	CCDS38570.1	2	189	22	4.75	21.5	194.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027852	Nras	ENSMUST00000128264	ENSMUSP00000123081	TRANSLATION	nonsense_mediated_decay	-	-	5	46	11	1	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027852	Nras	ENSMUST00000199776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027852	Nras	ENSMUST00000029445	ENSMUSP00000029445	TRANSLATION	protein_coding	-	CCDS38570.1	1	189	22	4.75	21.5	194.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027852	Nras	ENSMUST00000199049	ENSMUSP00000143644	TRANSLATION	protein_coding	stop	-	3	183	22	4.75	0	194.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000119572	ENSMUSP00000112558	TRANSLATION	protein_coding	-	CCDS71239.1	1	108	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000143841	ENSMUSP00000118749	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000195882	ENSMUSP00000142037	TRANSLATION	protein_coding	-	CCDS17332.1	2	192	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000192193	ENSMUSP00000142092	TRANSLATION	protein_coding	-	CCDS50900.1	1	108	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000195577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000026867	ENSMUSP00000026867	TRANSLATION	protein_coding	-	CCDS50900.1	5	108	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000146165	ENSMUSP00000119049	TRANSLATION	protein_coding	-	CCDS17332.1	1	192	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000195030	ENSMUSP00000142263	TRANSLATION	protein_coding	start	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000192799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000193075	ENSMUSP00000141756	TRANSLATION	protein_coding	start	-	5	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000194346	ENSMUSP00000141925	TRANSLATION	protein_coding	-	CCDS17332.1	1	192	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000193228	ENSMUSP00000142198	TRANSLATION	nonsense_mediated_decay	start	-	5	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000026868	ENSMUSP00000026868	TRANSLATION	protein_coding	stop	-	3	118	0	0	1.3	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000120167	ENSMUSP00000113139	TRANSLATION	protein_coding	-	-	5	127	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025766	D3Ertd751e	ENSMUST00000108065	ENSMUSP00000103700	TRANSLATION	protein_coding	-	CCDS17332.1	1	192	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000068879	Gm5773	ENSMUST00000090853	ENSMUSP00000088366	TRANSLATION	protein_coding	-	-	-	364	0	1	0	127.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056270	Prr9	ENSMUST00000070284	ENSMUSP00000068470	TRANSLATION	protein_coding	-	CCDS38508.1	1	116	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000050549	Fam241a	ENSMUST00000057198	ENSMUSP00000062387	TRANSLATION	protein_coding	-	-	1	62	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000050549	Fam241a	ENSMUST00000199273	ENSMUSP00000142535	TRANSLATION	protein_coding	-	CCDS17829.1	1	131	0	0	1.5	88.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028004	Npy2r	ENSMUST00000098997	ENSMUSP00000096595	TRANSLATION	protein_coding	-	CCDS59646.1	1	381	0	1.44	7.5	176	9	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028004	Npy2r	ENSMUST00000182831	ENSMUSP00000138282	TRANSLATION	protein_coding	-	CCDS59646.1	1	381	0	1.44	7.5	176	9	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028004	Npy2r	ENSMUST00000182181	ENSMUSP00000138559	TRANSLATION	protein_coding	-	CCDS57219.1	1	268	0	0.64	0.5	93	6	-4,-5	-	-	3.684	MINOR
ENSMUSG00000028004	Npy2r	ENSMUST00000029633	ENSMUSP00000029633	TRANSLATION	protein_coding	-	CCDS59646.1	2	381	0	1.44	7.5	176	9	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000134575	ENSMUSP00000119149	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0	0	80.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000188034	ENSMUSP00000140075	TRANSLATION	protein_coding	start	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000039571	ENSMUSP00000045376	TRANSLATION	protein_coding	-	CCDS17898.1	1	180	0	0	2.7	132.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000152783	ENSMUSP00000118224	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	0	0	72.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000189656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000138876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036873	2410004B18Rik	ENSMUST00000190472	ENSMUSP00000140015	TRANSLATION	protein_coding	start	-	3	83	0	0	0	70.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027871	Hsd3b1	ENSMUST00000107016	ENSMUSP00000102630	TRANSLATION	protein_coding	-	CCDS17670.1	1	373	27	1.5	3.9	399.6	1	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000027871	Hsd3b1	ENSMUST00000029465	ENSMUSP00000029465	TRANSLATION	protein_coding	-	CCDS17670.1	2	373	27	1.5	3.9	399.6	1	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000051000	Fam160a1	ENSMUST00000118408	ENSMUSP00000113235	TRANSLATION	protein_coding	-	CCDS17442.2	5	1081	0	0	0.5	320.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051000	Fam160a1	ENSMUST00000126445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051000	Fam160a1	ENSMUST00000094148	ENSMUSP00000091700	TRANSLATION	protein_coding	-	CCDS17442.2	5	1081	0	0	0.5	320.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051000	Fam160a1	ENSMUST00000119077	ENSMUSP00000112705	TRANSLATION	nonsense_mediated_decay	-	-	5	226	0	0	0	153.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036951	Aadacl2fm1	ENSMUST00000049476	ENSMUSP00000047032	TRANSLATION	protein_coding	-	CCDS38441.1	1	280	3	1.58	0.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000050174	Nudt6	ENSMUST00000138949	ENSMUSP00000118428	TRANSLATION	protein_coding	start/stop	-	2	126	3	2.1	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000198158	ENSMUSP00000142436	TRANSLATION	nonsense_mediated_decay	start	-	2	153	2	2.6	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000099130	ENSMUSP00000096733	TRANSLATION	protein_coding	-	CCDS38418.1	1	312	15	6.18	1.5	62	0	1,3	-	-	18.022	PRINCIPAL:3
ENSMUSG00000050174	Nudt6	ENSMUST00000108117	ENSMUSP00000103752	TRANSLATION	protein_coding	-	-	5	103	0	1.6	0	0	0	1,3	-	-	0	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000052645	ENSMUSP00000056219	TRANSLATION	protein_coding	-	CCDS71237.1	1	313	15	6.18	1.5	64.4	0	1,3	-	-	18.244	ALTERNATIVE:2
ENSMUSG00000050174	Nudt6	ENSMUST00000141438	ENSMUSP00000142588	TRANSLATION	protein_coding	-	-	2	97	1	1.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000108118	ENSMUSP00000103753	TRANSLATION	protein_coding	-	-	5	245	12	5.18	0	62.2	0	1,3	-	-	13.8	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000146324	ENSMUSP00000142653	TRANSLATION	protein_coding	-	-	1	147	12	3.08	5.1	51.9	0	-4,-5	-	-	10.838	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000149449	ENSMUSP00000116572	TRANSLATION	protein_coding	stop	-	3	190	8	4.01	0	0	0	1,3	-	-	-1	MINOR
ENSMUSG00000050174	Nudt6	ENSMUST00000133894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078604	Gm10961	ENSMUST00000106703	ENSMUSP00000102314	TRANSLATION	protein_coding	start/stop	-	5	48	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000027794	Sohlh2	ENSMUST00000029369	ENSMUSP00000029369	TRANSLATION	protein_coding	-	CCDS17358.1	1	467	0	0	0.5	35.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000053398	Phgdh	ENSMUST00000152106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053398	Phgdh	ENSMUST00000153694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053398	Phgdh	ENSMUST00000065793	ENSMUSP00000064755	TRANSLATION	protein_coding	-	CCDS17663.1	1	533	26	9.36	7.6	332.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000053398	Phgdh	ENSMUST00000148488	ENSMUSP00000117525	TRANSLATION	protein_coding	start/stop	-	5	149	12	3.88	0	159.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058400	Qrfpr	ENSMUST00000197447	ENSMUSP00000143773	TRANSLATION	protein_coding	-	-	5	258	0	2.64	0	119.7	5	-4,-2	-	-	5.04	MINOR
ENSMUSG00000058400	Qrfpr	ENSMUST00000091227	ENSMUSP00000088768	TRANSLATION	protein_coding	-	CCDS17311.1	1	433	0	4.12	5.1	186.4	8	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000058400	Qrfpr	ENSMUST00000197275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000199401	ENSMUSP00000143460	TRANSLATION	protein_coding	stop	-	3	90	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039701	Usp53	ENSMUST00000090379	ENSMUSP00000087857	TRANSLATION	protein_coding	-	CCDS17815.1	1	1069	15	0.88	0.5	68.2	0	-4,-7	-	-	16.398	PRINCIPAL:1
ENSMUSG00000039701	Usp53	ENSMUST00000198814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000200188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000197801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000197358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000199329	ENSMUSP00000143119	TRANSLATION	nonsense_mediated_decay	-	-	1	128	5	0	0	31.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039701	Usp53	ENSMUST00000197934	ENSMUSP00000143412	TRANSLATION	protein_coding	stop	-	1	427	17	0.88	0	71.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039701	Usp53	ENSMUST00000199923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039701	Usp53	ENSMUST00000197314	ENSMUSP00000142600	TRANSLATION	protein_coding	-	-	5	283	13	0.48	0	46.3	0	-4,-7	-	-	10.494	MINOR
ENSMUSG00000039887	Alg14	ENSMUST00000198235	ENSMUSP00000142989	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039887	Alg14	ENSMUST00000198341	ENSMUSP00000142775	TRANSLATION	protein_coding	start	-	2	133	0	0	0	100.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039887	Alg14	ENSMUST00000199554	ENSMUSP00000142857	TRANSLATION	protein_coding	-	-	3	92	0	0	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000039887	Alg14	ENSMUST00000039442	ENSMUSP00000038387	TRANSLATION	protein_coding	-	CCDS17801.1	1	217	0	0	1.5	226.1	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000049128	Ivl	ENSMUST00000053107	ENSMUSP00000059780	TRANSLATION	protein_coding	-	CCDS17561.1	3	468	0	0	0.5	247.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000051136	Ghsr	ENSMUST00000057186	ENSMUSP00000061153	TRANSLATION	protein_coding	-	CCDS17273.1	1	364	0	1.28	6.3	168.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000028101	Pias3	ENSMUST00000162707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028101	Pias3	ENSMUST00000107077	ENSMUSP00000102692	TRANSLATION	protein_coding	-	CCDS17645.2	1	593	4	12.24	0.5	196.6	0	-4,-5	-	-	14.998	MINOR
ENSMUSG00000028101	Pias3	ENSMUST00000064900	ENSMUSP00000069259	TRANSLATION	protein_coding	-	CCDS51007.1	1	628	4	12.74	6.3	196.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028101	Pias3	ENSMUST00000107076	ENSMUSP00000102691	TRANSLATION	protein_coding	-	CCDS38559.1	1	619	4	12.41	5.1	196.6	0	-4,-2	-	-	16.888	MINOR
ENSMUSG00000028101	Pias3	ENSMUST00000176288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028101	Pias3	ENSMUST00000162778	ENSMUSP00000125377	TRANSLATION	protein_coding	stop	-	3	90	0	2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028101	Pias3	ENSMUST00000162934	ENSMUSP00000125747	TRANSLATION	nonsense_mediated_decay	-	-	1	430	4	10.78	0	196.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028101	Pias3	ENSMUST00000176302	ENSMUSP00000134835	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	1.198	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028101	Pias3	ENSMUST00000161296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028101	Pias3	ENSMUST00000162156	ENSMUSP00000135843	TRANSLATION	protein_coding	start	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048938	Nr1h5	ENSMUST00000058899	ENSMUSP00000052557	TRANSLATION	protein_coding	-	CCDS38568.1	1	505	8	7.308	1.5	166.4	0	-4,-5	-	-	17.736	PRINCIPAL:3
ENSMUSG00000048938	Nr1h5	ENSMUST00000197412	ENSMUSP00000143764	TRANSLATION	nonsense_mediated_decay	-	-	1	387	8	5.158	0	100.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048938	Nr1h5	ENSMUST00000198472	ENSMUSP00000142345	TRANSLATION	nonsense_mediated_decay	-	-	1	379	8	4.96	0	100.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048938	Nr1h5	ENSMUST00000196135	ENSMUSP00000143445	TRANSLATION	protein_coding	-	CCDS79989.1	1	447	4	6.508	0.5	118.9	0	-4,-5	-	-	10.284	MINOR
ENSMUSG00000048938	Nr1h5	ENSMUST00000196983	ENSMUSP00000142799	TRANSLATION	protein_coding	-	CCDS79988.1	1	497	8	7.11	0.5	170.8	0	-4,-5	-	-	17.604	ALTERNATIVE:2
ENSMUSG00000027883	Gpsm2	ENSMUST00000145558	ENSMUSP00000115759	TRANSLATION	protein_coding	stop	-	3	154	0	2.5	0	54.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027883	Gpsm2	ENSMUST00000154263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027883	Gpsm2	ENSMUST00000029482	ENSMUSP00000029482	TRANSLATION	protein_coding	-	CCDS51048.1	1	679	0	9.25	3.9	270.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000027883	Gpsm2	ENSMUST00000124043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004038	Gstm3	ENSMUST00000004136	ENSMUSP00000004136	TRANSLATION	protein_coding	-	CCDS17744.1	1	218	10	6.5	9.6	129.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000068877	Selenbp2	ENSMUST00000173981	ENSMUSP00000133320	TRANSLATION	protein_coding	stop	-	5	128	0	2.98	0	195.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068877	Selenbp2	ENSMUST00000174223	ENSMUSP00000134623	TRANSLATION	protein_coding	stop	-	5	134	0	2.88	0	178.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068877	Selenbp2	ENSMUST00000131650	ENSMUSP00000133462	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068877	Selenbp2	ENSMUST00000173849	ENSMUSP00000134270	TRANSLATION	protein_coding	-	-	5	410	0	6.06	0	544.7	0	-4,-5	-	-	3.738	MINOR
ENSMUSG00000068877	Selenbp2	ENSMUST00000174377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068877	Selenbp2	ENSMUST00000132162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068877	Selenbp2	ENSMUST00000090848	ENSMUSP00000088358	TRANSLATION	protein_coding	-	CCDS38539.1	1	472	0	7.19	4.9	739.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000033883	Zfp267	ENSMUST00000205077	ENSMUSP00000145477	TRANSLATION	protein_coding	stop	-	3	25	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033883	Zfp267	ENSMUST00000197653	ENSMUSP00000142829	TRANSLATION	protein_coding	-	CCDS79898.1	1	796	59	1.7	1.5	394.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033883	Zfp267	ENSMUST00000165956	ENSMUSP00000131779	TRANSLATION	protein_coding	start	-	3	795	59	1.7	1.5	394.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039735	Fnbp1l	ENSMUST00000162947	ENSMUSP00000124947	TRANSLATION	protein_coding	-	CCDS51062.1	5	609	0	11.73	9.5	115.1	0	-4,-5	-	-	15.092	ALTERNATIVE:1
ENSMUSG00000039735	Fnbp1l	ENSMUST00000162884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039735	Fnbp1l	ENSMUST00000197342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039735	Fnbp1l	ENSMUST00000239148	ENSMUSP00000158906	TRANSLATION	protein_coding	-	-	-	604	0	11.73	0	115.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000039735	Fnbp1l	ENSMUST00000197259	ENSMUSP00000143237	TRANSLATION	protein_coding	start	-	5	451	0	7.5	0	46.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039735	Fnbp1l	ENSMUST00000162409	ENSMUSP00000124439	TRANSLATION	protein_coding	-	CCDS17811.2	5	551	0	11.73	12	115.1	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027690	Slc2a2	ENSMUST00000029240	ENSMUSP00000029240	TRANSLATION	protein_coding	-	CCDS50880.1	1	523	0	9	2.7	544.9	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027690	Slc2a2	ENSMUST00000163536	ENSMUSP00000131046	TRANSLATION	nonsense_mediated_decay	-	-	5	159	0	1.2	0	59.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000027690	Slc2a2	ENSMUST00000169047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069114	Zbtb10	ENSMUST00000155203	ENSMUSP00000119386	TRANSLATION	protein_coding	-	CCDS50861.1	5	861	11	1.52	0.5	116.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047213	Ythdf3	ENSMUST00000193598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047213	Ythdf3	ENSMUST00000108345	ENSMUSP00000103982	TRANSLATION	protein_coding	-	CCDS50869.1	1	585	0	1.13	9.5	140.2	0	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000047213	Ythdf3	ENSMUST00000191774	ENSMUSP00000141610	TRANSLATION	protein_coding	-	-	1	589	0	1.13	7	140.2	0	-4,-5	-	-	14.118	ALTERNATIVE:1
ENSMUSG00000047213	Ythdf3	ENSMUST00000108346	ENSMUSP00000103983	TRANSLATION	protein_coding	-	CCDS38396.1	1	596	0	1.13	0.5	140.2	0	-4,-6	-	-	12	MINOR
ENSMUSG00000027615	Hps3	ENSMUST00000126644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027615	Hps3	ENSMUST00000151752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027615	Hps3	ENSMUST00000133094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027615	Hps3	ENSMUST00000155121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027615	Hps3	ENSMUST00000137408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027615	Hps3	ENSMUST00000139446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027615	Hps3	ENSMUST00000124808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027615	Hps3	ENSMUST00000141308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027615	Hps3	ENSMUST00000012580	ENSMUSP00000012580	TRANSLATION	protein_coding	-	CCDS17260.1	1	1002	0	0	3.9	1355.3	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000027615	Hps3	ENSMUST00000130171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027615	Hps3	ENSMUST00000108321	ENSMUSP00000103957	TRANSLATION	protein_coding	-	CCDS50872.1	1	870	0	0	0.5	1183.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000027746	Ufm1	ENSMUST00000029309	ENSMUSP00000029309	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	1.5	0	90.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027746	Ufm1	ENSMUST00000148338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027746	Ufm1	ENSMUST00000122330	ENSMUSP00000112586	TRANSLATION	protein_coding	-	-	2	82	0	2.13	0	122	0	-4,-7	-	-	9.45	MINOR
ENSMUSG00000027746	Ufm1	ENSMUST00000146598	ENSMUSP00000118478	TRANSLATION	protein_coding	-	CCDS38430.1	1	85	0	2.58	17.8	147.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000027746	Ufm1	ENSMUST00000152414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037661	Gpr160	ENSMUST00000108261	ENSMUSP00000103896	TRANSLATION	protein_coding	-	CCDS50883.1	1	336	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037661	Gpr160	ENSMUST00000046748	ENSMUSP00000045165	TRANSLATION	protein_coding	-	CCDS50883.1	1	336	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037661	Gpr160	ENSMUST00000194979	ENSMUSP00000142310	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037661	Gpr160	ENSMUST00000108259	ENSMUSP00000103894	TRANSLATION	protein_coding	-	CCDS50883.1	3	336	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037661	Gpr160	ENSMUST00000130294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037661	Gpr160	ENSMUST00000166278	ENSMUSP00000128666	TRANSLATION	protein_coding	-	CCDS50883.1	1	336	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037661	Gpr160	ENSMUST00000108258	ENSMUSP00000103893	TRANSLATION	protein_coding	-	CCDS50883.1	1	336	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037661	Gpr160	ENSMUST00000147697	ENSMUSP00000121542	TRANSLATION	protein_coding	stop	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027787	Nmd3	ENSMUST00000149680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027787	Nmd3	ENSMUST00000194168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027787	Nmd3	ENSMUST00000143249	ENSMUSP00000115736	TRANSLATION	protein_coding	stop	-	3	76	6	0	0	47.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027787	Nmd3	ENSMUST00000135266	ENSMUSP00000142290	TRANSLATION	nonsense_mediated_decay	-	-	3	144	6	0	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027787	Nmd3	ENSMUST00000150210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027787	Nmd3	ENSMUST00000029358	ENSMUSP00000029358	TRANSLATION	protein_coding	-	CCDS17407.1	1	503	6	0	5.9	264.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027787	Nmd3	ENSMUST00000127211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027787	Nmd3	ENSMUST00000143041	ENSMUSP00000116113	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048109	Rbm15	ENSMUST00000061772	ENSMUSP00000054424	TRANSLATION	protein_coding	-	CCDS38590.1	1	962	0	0	2.7	197.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000048109	Rbm15	ENSMUST00000197769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032952	Ap4b1	ENSMUST00000047285	ENSMUSP00000044262	TRANSLATION	protein_coding	-	CCDS17696.1	1	738	0	7.49	7.5	385.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032952	Ap4b1	ENSMUST00000106824	ENSMUSP00000102437	TRANSLATION	protein_coding	-	-	5	663	0	6.49	2.4	282	0	-4,-5	-	-	4.647	MINOR
ENSMUSG00000032952	Ap4b1	ENSMUST00000199686	ENSMUSP00000142457	TRANSLATION	nonsense_mediated_decay	start	-	3	154	0	1.01	0	50.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032952	Ap4b1	ENSMUST00000106823	ENSMUSP00000102436	TRANSLATION	protein_coding	-	CCDS51026.1	1	710	0	7.28	0.5	349.2	0	-4,-5	-	-	9.396	MINOR
ENSMUSG00000032952	Ap4b1	ENSMUST00000200377	ENSMUSP00000143355	TRANSLATION	protein_coding	-	-	5	570	0	5.41	2.4	236.1	0	-4,-6	-	-	2.487	MINOR
ENSMUSG00000032952	Ap4b1	ENSMUST00000199723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032952	Ap4b1	ENSMUST00000076599	ENSMUSP00000075904	TRANSLATION	protein_coding	-	CCDS17696.1	1	738	0	7.49	7.5	385.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027763	Mbnl1	ENSMUST00000193647	ENSMUSP00000141536	TRANSLATION	protein_coding	stop	-	5	257	8	2.2	0	22.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000195001	ENSMUSP00000141848	TRANSLATION	protein_coding	stop	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000191638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027763	Mbnl1	ENSMUST00000192623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027763	Mbnl1	ENSMUST00000194201	ENSMUSP00000141954	TRANSLATION	protein_coding	-	-	5	302	16	4	4.4	20.7	0	-4,-5	-	-	18.372	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000193517	ENSMUSP00000141287	TRANSLATION	protein_coding	-	-	5	387	16	4.2	12.8	22.1	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000027763	Mbnl1	ENSMUST00000192637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000192086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027763	Mbnl1	ENSMUST00000195839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000192520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000195817	ENSMUSP00000141576	TRANSLATION	protein_coding	start	-	5	209	8	2.2	0	22.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000192807	ENSMUSP00000141915	TRANSLATION	protein_coding	-	CCDS79918.1	1	289	8	2.2	3.9	22.1	0	-2,-5	-	-	9.648	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000194069	ENSMUSP00000141474	TRANSLATION	protein_coding	-	CCDS79916.1	1	347	16	4.2	10.6	22.1	0	-4,-5	-	-	21.256	ALTERNATIVE:1
ENSMUSG00000027763	Mbnl1	ENSMUST00000193130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027763	Mbnl1	ENSMUST00000191747	ENSMUSP00000142057	TRANSLATION	protein_coding	-	CCDS79919.1	1	254	8	2.2	0.5	22.1	0	-2,-5	-	-	8.664	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000193175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000194003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027763	Mbnl1	ENSMUST00000192757	ENSMUSP00000142045	TRANSLATION	protein_coding	start/stop	-	2	192	5	1.7	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000193518	ENSMUSP00000142088	TRANSLATION	protein_coding	start	-	5	302	8	2.2	0	22.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000192607	ENSMUSP00000142095	TRANSLATION	protein_coding	-	CCDS79917.1	1	341	16	4.2	8.5	22.1	0	-4,-5	-	-	20.544	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000195832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000192394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027763	Mbnl1	ENSMUST00000099087	ENSMUSP00000096686	TRANSLATION	protein_coding	-	CCDS17376.1	1	381	16	4.2	12.8	22.1	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000027763	Mbnl1	ENSMUST00000195077	ENSMUSP00000142074	TRANSLATION	protein_coding	stop	-	5	182	8	2.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027763	Mbnl1	ENSMUST00000195724	ENSMUSP00000141984	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015947	Fcgr1	ENSMUST00000029748	ENSMUSP00000029748	TRANSLATION	protein_coding	-	CCDS17639.1	1	404	0	4.132	0.5	119.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015947	Fcgr1	ENSMUST00000200420	ENSMUSP00000142661	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0.632	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001023	S100a5	ENSMUST00000107329	ENSMUSP00000102952	TRANSLATION	protein_coding	-	CCDS38505.1	1	93	13	2	9.5	58.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001023	S100a5	ENSMUST00000001049	ENSMUSP00000001049	TRANSLATION	protein_coding	-	CCDS38505.1	1	93	13	2	9.5	58.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028076	Cd1d1	ENSMUST00000107620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028076	Cd1d1	ENSMUST00000132131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028076	Cd1d1	ENSMUST00000142793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028076	Cd1d1	ENSMUST00000029717	ENSMUSP00000029717	TRANSLATION	protein_coding	-	CCDS17449.1	1	336	5	5.48	0.5	354.6	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000028076	Cd1d1	ENSMUST00000063869	ENSMUSP00000070616	TRANSLATION	protein_coding	-	-	1	205	0	3.48	0	152.5	1	3,-2	-	-	1.998	MINOR
ENSMUSG00000062515	Fabp4	ENSMUST00000029041	ENSMUSP00000029041	TRANSLATION	protein_coding	-	CCDS17238.1	1	132	19	3.25	10.8	94.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000062515	Fabp4	ENSMUST00000191757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027978	Prss12	ENSMUST00000029603	ENSMUSP00000029603	TRANSLATION	protein_coding	-	CCDS17817.1	1	761	6	4.48	1.5	572.6	0	4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000082766	1700064H15Rik	ENSMUST00000119133	ENSMUSP00000113751	TRANSLATION	protein_coding	-	-	1	81	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000070385	Ampd1	ENSMUST00000199407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070385	Ampd1	ENSMUST00000090715	ENSMUSP00000088217	TRANSLATION	protein_coding	-	CCDS38571.1	1	745	6	10.085	2.7	446.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070385	Ampd1	ENSMUST00000176440	ENSMUSP00000135737	TRANSLATION	protein_coding	stop	-	5	178	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070385	Ampd1	ENSMUST00000177250	ENSMUSP00000134772	TRANSLATION	protein_coding	start	-	5	247	4	5.55	0	268.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070385	Ampd1	ENSMUST00000155034	ENSMUSP00000143129	TRANSLATION	protein_coding	-	-	1	676	6	8.285	0	379.5	0	-4,-5	-	-	10.362	MINOR
ENSMUSG00000041842	Fhdc1	ENSMUST00000194027	ENSMUSP00000142030	TRANSLATION	protein_coding	-	-	5	208	0	1.56	0	79.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041842	Fhdc1	ENSMUST00000107689	ENSMUSP00000103317	TRANSLATION	protein_coding	-	CCDS17438.1	1	1149	0	5.61	0.5	311.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041842	Fhdc1	ENSMUST00000091002	ENSMUSP00000088525	TRANSLATION	protein_coding	-	CCDS17438.1	1	1149	0	5.61	0.5	311.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041842	Fhdc1	ENSMUST00000131065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041842	Fhdc1	ENSMUST00000125643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051444	Bbs12	ENSMUST00000057975	ENSMUSP00000052179	TRANSLATION	protein_coding	-	CCDS38417.1	2	708	0	0	3.9	69.2	0	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000051444	Bbs12	ENSMUST00000108121	ENSMUSP00000103756	TRANSLATION	protein_coding	-	CCDS57209.1	1	593	0	0	1.5	41.7	0	-4,-6	-	-	3.79	MINOR
ENSMUSG00000028015	Ctso	ENSMUST00000155144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028015	Ctso	ENSMUST00000192067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028015	Ctso	ENSMUST00000029649	ENSMUSP00000029649	TRANSLATION	protein_coding	-	CCDS17426.1	1	312	4	4.951	0.5	201	0	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000028015	Ctso	ENSMUST00000143307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039037	St6galnac5	ENSMUST00000161757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039037	St6galnac5	ENSMUST00000044278	ENSMUSP00000036227	TRANSLATION	protein_coding	-	CCDS38676.1	1	335	12	1.32	2.9	124.6	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091648	C2cd4d	ENSMUST00000169433	ENSMUSP00000128182	TRANSLATION	protein_coding	-	CCDS50983.1	3	341	0	0	1.5	29	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091648	C2cd4d	ENSMUST00000197526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037610	Kcnmb2	ENSMUST00000178668	ENSMUSP00000136596	TRANSLATION	protein_coding	-	CCDS17292.1	5	235	0	1.5	10.8	347.1	3	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037610	Kcnmb2	ENSMUST00000119970	ENSMUSP00000113234	TRANSLATION	protein_coding	-	CCDS17292.1	1	235	0	1.5	10.8	347.1	3	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037610	Kcnmb2	ENSMUST00000191869	ENSMUSP00000141955	TRANSLATION	protein_coding	-	-	5	181	0	1.5	0	243.6	2	-4,-2	-	-	6	MINOR
ENSMUSG00000037610	Kcnmb2	ENSMUST00000192429	ENSMUSP00000141656	TRANSLATION	protein_coding	-	CCDS17292.1	5	235	0	1.5	10.8	347.1	3	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037610	Kcnmb2	ENSMUST00000119310	ENSMUSP00000112531	TRANSLATION	protein_coding	-	CCDS17292.1	1	235	0	1.5	10.8	347.1	3	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037610	Kcnmb2	ENSMUST00000194796	ENSMUSP00000141858	TRANSLATION	protein_coding	-	-	1	36	0	0.5	0	0	0	-4,-7	-	-	1.998	MINOR
ENSMUSG00000027981	Rnpc3	ENSMUST00000132220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027981	Rnpc3	ENSMUST00000127068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027981	Rnpc3	ENSMUST00000106535	ENSMUSP00000102145	TRANSLATION	protein_coding	-	CCDS71308.1	1	513	0	3.95	6.3	64	0	-4,-7	-	-	13.802	ALTERNATIVE:1
ENSMUSG00000027981	Rnpc3	ENSMUST00000092154	ENSMUSP00000089792	TRANSLATION	protein_coding	-	CCDS17777.1	1	514	0	4.05	6.3	64	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000027981	Rnpc3	ENSMUST00000106536	ENSMUSP00000102146	TRANSLATION	protein_coding	-	CCDS17777.1	1	514	0	4.05	6.3	64	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000027981	Rnpc3	ENSMUST00000123232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027981	Rnpc3	ENSMUST00000135712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027981	Rnpc3	ENSMUST00000153853	ENSMUSP00000115492	TRANSLATION	protein_coding	start	-	2	463	0	4.05	0	34.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055301	Adh7	ENSMUST00000196133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055301	Adh7	ENSMUST00000090171	ENSMUSP00000087633	TRANSLATION	protein_coding	-	CCDS38651.1	1	374	34	7.41	8	73.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000055301	Adh7	ENSMUST00000199865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048997	Atxn7l2	ENSMUST00000117784	ENSMUSP00000114031	TRANSLATION	protein_coding	-	CCDS17754.1	1	696	8	1.35	1.7	88.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000048997	Atxn7l2	ENSMUST00000141054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048997	Atxn7l2	ENSMUST00000127157	ENSMUSP00000119223	TRANSLATION	protein_coding	stop	-	3	121	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048997	Atxn7l2	ENSMUST00000119650	ENSMUSP00000113020	TRANSLATION	protein_coding	-	-	5	661	5	1.35	0	88.5	0	-4,-7	-	-	15.75	MINOR
ENSMUSG00000048997	Atxn7l2	ENSMUST00000196823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048997	Atxn7l2	ENSMUST00000117409	ENSMUSP00000112976	TRANSLATION	protein_coding	-	-	5	664	8	1.35	0	88.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048997	Atxn7l2	ENSMUST00000102633	ENSMUSP00000099693	TRANSLATION	protein_coding	-	CCDS17754.1	1	696	8	1.35	1.7	88.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000049097	Ankrd34a	ENSMUST00000058943	ENSMUSP00000102707	TRANSLATION	protein_coding	-	CCDS38556.1	1	495	0	0.2	7.6	50.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027857	Tshb	ENSMUST00000196958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027857	Tshb	ENSMUST00000170856	ENSMUSP00000127165	TRANSLATION	protein_coding	-	CCDS17689.1	5	138	0	1.6	8.8	115.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027857	Tshb	ENSMUST00000029450	ENSMUSP00000029450	TRANSLATION	protein_coding	-	CCDS17689.1	5	138	0	1.6	8.8	115.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027857	Tshb	ENSMUST00000172026	ENSMUSP00000128440	TRANSLATION	protein_coding	-	CCDS17689.1	5	138	0	1.6	8.8	115.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027857	Tshb	ENSMUST00000200041	ENSMUSP00000142782	TRANSLATION	protein_coding	-	CCDS17689.1	5	138	0	1.6	8.8	115.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027857	Tshb	ENSMUST00000197322	ENSMUSP00000142670	TRANSLATION	protein_coding	-	CCDS17689.1	1	138	0	1.6	8.8	115.5	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028107	Tars2	ENSMUST00000199869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028107	Tars2	ENSMUST00000098857	ENSMUSP00000096456	TRANSLATION	protein_coding	-	CCDS50995.1	1	423	5	8.174	0.5	92.1	0	-4,0	-	-	0	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000163530	ENSMUSP00000130269	TRANSLATION	protein_coding	-	CCDS50994.1	1	642	20	14.064	0.5	265.9	0	-4,0	-	-	14.346	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000198007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028107	Tars2	ENSMUST00000195929	ENSMUSP00000143757	TRANSLATION	protein_coding	stop	-	5	104	2	2.882	0	36.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000200376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028107	Tars2	ENSMUST00000196868	ENSMUSP00000143033	TRANSLATION	protein_coding	stop	-	3	43	2	1.15	0	40.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000196475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028107	Tars2	ENSMUST00000199570	ENSMUSP00000143038	TRANSLATION	protein_coding	stop	-	2	209	2	3.448	0	92.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000029752	ENSMUSP00000029752	TRANSLATION	protein_coding	-	CCDS38548.1	1	723	22	15.224	1.5	265.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028107	Tars2	ENSMUST00000197895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028107	Tars2	ENSMUST00000198289	ENSMUSP00000143271	TRANSLATION	protein_coding	stop	-	5	142	2	4.164	0	36.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000199464	ENSMUSP00000143328	TRANSLATION	nonsense_mediated_decay	-	-	1	177	0	1.7	0	49.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000074339	ENSMUSP00000073946	TRANSLATION	protein_coding	-	CCDS50996.1	1	697	21	14.474	0.5	259.3	0	-4,0	-	-	15.438	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000197501	ENSMUSP00000143270	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000197389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028107	Tars2	ENSMUST00000198194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028107	Tars2	ENSMUST00000196077	ENSMUSP00000143722	TRANSLATION	nonsense_mediated_decay	start	-	1	264	4	4.01	0	89	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028107	Tars2	ENSMUST00000197720	ENSMUSP00000143295	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	0.2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001416	Cct3	ENSMUST00000168971	ENSMUSP00000131250	TRANSLATION	protein_coding	start	-	3	85	3	1.75	0	22.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001416	Cct3	ENSMUST00000164166	ENSMUSP00000126109	TRANSLATION	protein_coding	-	-	5	507	18	11.91	1.2	499.8	0	-4,-1	-	-	8.409	MINOR
ENSMUSG00000001416	Cct3	ENSMUST00000193666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001416	Cct3	ENSMUST00000163735	ENSMUSP00000130616	TRANSLATION	protein_coding	start/stop	-	3	306	11	6.08	0	215.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001416	Cct3	ENSMUST00000164783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001416	Cct3	ENSMUST00000001452	ENSMUSP00000001452	TRANSLATION	protein_coding	-	CCDS17468.1	1	545	23	13.16	10.4	563.4	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000001416	Cct3	ENSMUST00000167718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001416	Cct3	ENSMUST00000164122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001416	Cct3	ENSMUST00000167000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001416	Cct3	ENSMUST00000168062	ENSMUSP00000131113	TRANSLATION	protein_coding	-	-	1	521	23	12.358	0	548.8	0	-4,-2	-	-	15.522	MINOR
ENSMUSG00000098207	Arl14	ENSMUST00000183126	ENSMUSP00000138370	TRANSLATION	protein_coding	-	CCDS59645.1	-	192	18	1	3.9	201.9	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000028134	Ptbp2	ENSMUST00000198399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028134	Ptbp2	ENSMUST00000197833	ENSMUSP00000143719	TRANSLATION	nonsense_mediated_decay	-	-	5	356	0	5.55	0	33.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028134	Ptbp2	ENSMUST00000197464	ENSMUSP00000143281	TRANSLATION	protein_coding	-	-	1	241	0	3.8	0	24.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028134	Ptbp2	ENSMUST00000196343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028134	Ptbp2	ENSMUST00000198733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028134	Ptbp2	ENSMUST00000029780	ENSMUSP00000029780	TRANSLATION	protein_coding	-	CCDS38616.1	1	532	0	9.63	11.5	194.9	0	-4,-5	-	-	14.892	PRINCIPAL:3
ENSMUSG00000028134	Ptbp2	ENSMUST00000196066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028134	Ptbp2	ENSMUST00000197387	ENSMUSP00000142711	TRANSLATION	nonsense_mediated_decay	start	-	3	33	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028134	Ptbp2	ENSMUST00000199026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028134	Ptbp2	ENSMUST00000198403	ENSMUSP00000142664	TRANSLATION	protein_coding	-	-	1	49	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028134	Ptbp2	ENSMUST00000196203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028134	Ptbp2	ENSMUST00000195902	ENSMUSP00000143325	TRANSLATION	protein_coding	start/stop	-	5	155	0	3.08	0	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028134	Ptbp2	ENSMUST00000200097	ENSMUSP00000143510	TRANSLATION	protein_coding	-	CCDS80010.1	1	531	0	9.63	11.5	196.7	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000040600	Eps8l3	ENSMUST00000200198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040600	Eps8l3	ENSMUST00000199990	ENSMUSP00000143754	TRANSLATION	protein_coding	stop	-	2	89	0	1.8	0	91.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040600	Eps8l3	ENSMUST00000037375	ENSMUSP00000042004	TRANSLATION	protein_coding	-	CCDS38594.1	1	600	0	5.85	1.5	172.7	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027882	Stxbp3	ENSMUST00000124903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027882	Stxbp3	ENSMUST00000102621	ENSMUSP00000099681	TRANSLATION	protein_coding	-	CCDS17768.1	1	592	0	16.33	7.6	408.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027882	Stxbp3	ENSMUST00000138552	ENSMUSP00000142860	TRANSLATION	protein_coding	-	-	1	146	0	3.11	0	52.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027882	Stxbp3	ENSMUST00000200035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027882	Stxbp3	ENSMUST00000196679	ENSMUSP00000142785	TRANSLATION	protein_coding	start/stop	-	3	236	0	6.75	0	164.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027882	Stxbp3	ENSMUST00000106596	ENSMUSP00000102206	TRANSLATION	protein_coding	-	-	2	101	0	2.83	0	52.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027882	Stxbp3	ENSMUST00000124782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027882	Stxbp3	ENSMUST00000150010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027864	Ptgfrn	ENSMUST00000200065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027864	Ptgfrn	ENSMUST00000198037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027864	Ptgfrn	ENSMUST00000102694	ENSMUSP00000099755	TRANSLATION	protein_coding	-	CCDS17680.1	1	879	0	0	3.9	67.9	0	4,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000078784	Rbis	ENSMUST00000185423	ENSMUSP00000139401	TRANSLATION	protein_coding	-	-	3	58	0	0	0	56.1	0	-4,-7	-	-	1.962	MINOR
ENSMUSG00000078784	Rbis	ENSMUST00000190064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078784	Rbis	ENSMUST00000185384	ENSMUSP00000139512	TRANSLATION	protein_coding	-	CCDS79886.1	1	97	0	0	1.5	123.4	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000078784	Rbis	ENSMUST00000108365	ENSMUSP00000104002	TRANSLATION	protein_coding	-	CCDS84610.1	1	139	0	0	0.5	123.4	0	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000078784	Rbis	ENSMUST00000186870	ENSMUSP00000139464	TRANSLATION	protein_coding	-	-	1	81	0	0	0	106.1	0	-4,-7	-	-	4.962	MINOR
ENSMUSG00000087610	Gm16253	ENSMUST00000148290	ENSMUSP00000122904	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000062778	Chia1	ENSMUST00000139086	ENSMUSP00000121967	TRANSLATION	protein_coding	stop	-	5	215	2	5.25	0	213.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062778	Chia1	ENSMUST00000143128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062778	Chia1	ENSMUST00000079132	ENSMUSP00000078134	TRANSLATION	protein_coding	-	CCDS38585.1	1	473	2	9.928	1.5	363.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000028068	Iqgap3	ENSMUST00000195465	ENSMUSP00000142013	TRANSLATION	nonsense_mediated_decay	-	-	1	626	0	5.4	0	64.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028068	Iqgap3	ENSMUST00000071812	ENSMUSP00000071715	TRANSLATION	protein_coding	-	CCDS38478.1	1	1632	0	17.12	1.5	434.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028068	Iqgap3	ENSMUST00000193940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028068	Iqgap3	ENSMUST00000193861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028068	Iqgap3	ENSMUST00000194440	ENSMUSP00000142035	TRANSLATION	protein_coding	-	-	1	734	0	10.55	0	292.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028068	Iqgap3	ENSMUST00000194772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033981	Gria2	ENSMUST00000075316	ENSMUSP00000074787	TRANSLATION	protein_coding	-	CCDS17423.1	1	883	0	14.5	9.6	554.3	4	1,-3	-	-	14.844	PRINCIPAL:3
ENSMUSG00000033981	Gria2	ENSMUST00000107745	ENSMUSP00000103374	TRANSLATION	protein_coding	-	CCDS38459.1	5	883	0	14.5	9.6	556.9	4	1,-3	-	-	15	ALTERNATIVE:1
ENSMUSG00000033981	Gria2	ENSMUST00000194383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033981	Gria2	ENSMUST00000192463	ENSMUSP00000141447	TRANSLATION	nonsense_mediated_decay	-	-	1	777	0	12.5	0	529.4	3	1,-3	-	-	-1	MINOR
ENSMUSG00000033981	Gria2	ENSMUST00000194523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033981	Gria2	ENSMUST00000195062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033981	Gria2	ENSMUST00000194164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033981	Gria2	ENSMUST00000193645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028116	Myoz2	ENSMUST00000029761	ENSMUSP00000029761	TRANSLATION	protein_coding	-	CCDS17816.1	1	264	0	0	7.5	289.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000028116	Myoz2	ENSMUST00000140231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028116	Myoz2	ENSMUST00000200514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028116	Myoz2	ENSMUST00000141588	ENSMUSP00000115450	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028116	Myoz2	ENSMUST00000143464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028018	Gstcd	ENSMUST00000161577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028018	Gstcd	ENSMUST00000029651	ENSMUSP00000029651	TRANSLATION	protein_coding	-	CCDS17847.1	1	634	0	0	0.5	56.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028018	Gstcd	ENSMUST00000162926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028018	Gstcd	ENSMUST00000080583	ENSMUSP00000079421	TRANSLATION	protein_coding	-	CCDS17847.1	1	634	0	0	0.5	56.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028018	Gstcd	ENSMUST00000160402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028018	Gstcd	ENSMUST00000197381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096879	Tdpoz8	ENSMUST00000194595	ENSMUSP00000141574	TRANSLATION	protein_coding	-	CCDS38523.1	1	244	0	1.066	0.5	94.7	0	-4,-5	-	-	9.198	MINOR
ENSMUSG00000096879	Tdpoz8	ENSMUST00000195847	ENSMUSP00000141677	TRANSLATION	protein_coding	-	-	-	318	0	2	0	94.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096879	Tdpoz8	ENSMUST00000179064	ENSMUSP00000136458	TRANSLATION	protein_coding	-	CCDS38523.1	5	244	0	1.066	0.5	94.7	0	-4,-5	-	-	9.198	MINOR
ENSMUSG00000004233	Wars2	ENSMUST00000135960	ENSMUSP00000142470	TRANSLATION	nonsense_mediated_decay	-	-	1	175	11	3.3	0	136.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000004233	Wars2	ENSMUST00000126875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004233	Wars2	ENSMUST00000004343	ENSMUSP00000004343	TRANSLATION	protein_coding	-	CCDS17672.1	1	360	18	6.05	7.5	232	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000004233	Wars2	ENSMUST00000198044	ENSMUSP00000142361	TRANSLATION	protein_coding	-	-	3	106	6	2.3	0	42.3	0	-4,-1	-	-	0	MINOR
ENSMUSG00000004233	Wars2	ENSMUST00000145650	ENSMUSP00000142723	TRANSLATION	nonsense_mediated_decay	-	-	1	188	11	3.3	0	136.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042157	Sprr2i	ENSMUST00000047264	ENSMUSP00000043513	TRANSLATION	protein_coding	-	CCDS38511.1	1	76	0	0	0.5	73.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095822	Gm9117	ENSMUST00000177735	ENSMUSP00000136341	TRANSLATION	protein_coding	-	-	-	365	0	1	0.5	98.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095822	Gm9117	ENSMUST00000193529	ENSMUSP00000141802	TRANSLATION	protein_coding	-	-	1	365	0	1	0.5	98.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004895	Prcc	ENSMUST00000005015	ENSMUSP00000005015	TRANSLATION	protein_coding	-	CCDS17456.1	1	491	0	0	7.5	213.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027706	Sec62	ENSMUST00000191730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027706	Sec62	ENSMUST00000029256	ENSMUSP00000029256	TRANSLATION	protein_coding	-	CCDS17286.1	1	398	0	0	2.7	256.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027706	Sec62	ENSMUST00000195072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041750	Cd1d2	ENSMUST00000192481	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000041750	Cd1d2	ENSMUST00000041920	ENSMUSP00000039583	TRANSLATION	protein_coding	-	-	5	335	5	5.08	0.5	312.7	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000041750	Cd1d2	ENSMUST00000194208	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000105827	H2bc18	ENSMUST00000177113	ENSMUSP00000135427	TRANSLATION	protein_coding	-	CCDS57243.1	-	126	0	1	7.5	88.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000165309	ENSMUSP00000126445	TRANSLATION	protein_coding	-	CCDS17228.1	5	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000191916	ENSMUSP00000141945	TRANSLATION	protein_coding	-	CCDS17228.1	5	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000059021	ENSMUSP00000059415	TRANSLATION	protein_coding	-	CCDS17228.1	1	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000195855	ENSMUSP00000141927	TRANSLATION	protein_coding	-	CCDS17228.1	1	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000071280	ENSMUSP00000071255	TRANSLATION	protein_coding	-	CCDS17228.1	1	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040374	Pex2	ENSMUST00000164828	ENSMUSP00000129311	TRANSLATION	protein_coding	-	CCDS17228.1	2	305	8	0	5.1	156.6	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025759	Mfsd8	ENSMUST00000026859	ENSMUSP00000026859	TRANSLATION	protein_coding	-	CCDS17329.1	1	519	0	0	7.5	103.3	15	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025759	Mfsd8	ENSMUST00000204907	ENSMUSP00000144842	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	76.1	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000025759	Mfsd8	ENSMUST00000204017	ENSMUSP00000145458	TRANSLATION	protein_coding	stop	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025759	Mfsd8	ENSMUST00000204454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025759	Mfsd8	ENSMUST00000204399	ENSMUSP00000145129	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000025759	Mfsd8	ENSMUST00000204054	ENSMUSP00000145074	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025759	Mfsd8	ENSMUST00000204374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000105053	Gm43064	ENSMUST00000199710	ENSMUSP00000143463	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	663	0	5.21	2.4	281.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000028062	Lamtor2	ENSMUST00000156421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028062	Lamtor2	ENSMUST00000119002	ENSMUSP00000112936	TRANSLATION	protein_coding	-	-	2	52	0	1.5	0	0	0	-4,-7	-	-	2.502	MINOR
ENSMUSG00000028062	Lamtor2	ENSMUST00000145548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028062	Lamtor2	ENSMUST00000145172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028062	Lamtor2	ENSMUST00000029698	ENSMUSP00000029698	TRANSLATION	protein_coding	-	CCDS17478.1	1	125	0	3.25	19.5	65.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028108	Ecm1	ENSMUST00000128885	ENSMUSP00000120820	TRANSLATION	protein_coding	stop	-	5	251	0	0	0	387.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028108	Ecm1	ENSMUST00000137912	ENSMUSP00000122243	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	94	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028108	Ecm1	ENSMUST00000029753	ENSMUSP00000029753	TRANSLATION	protein_coding	-	CCDS57237.1	1	558	0	0	1.5	1053.2	0	3,-2	-	-	5.454	ALTERNATIVE:2
ENSMUSG00000028108	Ecm1	ENSMUST00000147217	ENSMUSP00000115524	TRANSLATION	protein_coding	stop	-	2	80	0	0	0	91.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028108	Ecm1	ENSMUST00000153026	ENSMUSP00000114747	TRANSLATION	protein_coding	stop	-	5	230	0	0	0	271.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028108	Ecm1	ENSMUST00000155815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028108	Ecm1	ENSMUST00000144958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028108	Ecm1	ENSMUST00000117507	ENSMUSP00000112665	TRANSLATION	protein_coding	-	CCDS17619.1	1	559	0	0	1.5	1062.3	0	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000028108	Ecm1	ENSMUST00000123143	ENSMUSP00000120300	TRANSLATION	protein_coding	stop	-	5	266	0	0	0	399.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028108	Ecm1	ENSMUST00000131376	ENSMUSP00000114659	TRANSLATION	protein_coding	stop	-	3	295	0	0	0	421.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025255	Zfhx4	ENSMUST00000026284	ENSMUSP00000026284	TRANSLATION	protein_coding	-	CCDS38382.1	5	3581	47	0	0.5	267.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025255	Zfhx4	ENSMUST00000175641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025255	Zfhx4	ENSMUST00000176383	ENSMUSP00000135289	TRANSLATION	protein_coding	-	CCDS38382.1	5	3581	47	0	0.5	267.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025255	Zfhx4	ENSMUST00000175866	ENSMUSP00000135827	TRANSLATION	protein_coding	-	-	5	3606	47	0	0.5	267.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025255	Zfhx4	ENSMUST00000176175	ENSMUSP00000139253	TRANSLATION	protein_coding	stop	-	5	101	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027499	Pkia	ENSMUST00000028999	ENSMUSP00000028999	TRANSLATION	protein_coding	-	CCDS38383.1	1	76	0	1.75	13.5	100.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027499	Pkia	ENSMUST00000193330	ENSMUSP00000141466	TRANSLATION	protein_coding	-	CCDS38383.1	2	76	0	1.75	13.5	100.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027499	Pkia	ENSMUST00000192468	ENSMUSP00000142120	TRANSLATION	protein_coding	stop	-	3	50	0	1	0	84.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027782	Kpna4	ENSMUST00000029353	ENSMUSP00000029353	TRANSLATION	protein_coding	-	-	1	623	0	13.4	0	465.8	0	-2,-5	-	-	12	MINOR
ENSMUSG00000027782	Kpna4	ENSMUST00000127497	ENSMUSP00000121076	TRANSLATION	protein_coding	stop	-	5	111	0	3.26	0	89.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027782	Kpna4	ENSMUST00000194558	ENSMUSP00000141227	TRANSLATION	protein_coding	-	CCDS17403.1	1	521	0	13.4	15.5	465.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027938	Creb3l4	ENSMUST00000029547	ENSMUSP00000029547	TRANSLATION	protein_coding	-	CCDS17524.1	1	370	0	1.25	0.5	44.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027938	Creb3l4	ENSMUST00000107369	ENSMUSP00000102992	TRANSLATION	protein_coding	-	CCDS17524.1	1	370	0	1.25	0.5	44.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028059	Arhgef2	ENSMUST00000176500	ENSMUSP00000134834	TRANSLATION	protein_coding	-	-	5	970	9	9.36	3.9	164.4	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000175745	ENSMUSP00000135044	TRANSLATION	protein_coding	stop	-	3	84	9	0	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000175903	ENSMUSP00000135168	TRANSLATION	protein_coding	-	-	5	1183	9	9.36	0.5	164.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000107510	ENSMUSP00000103134	TRANSLATION	protein_coding	-	CCDS57222.1	1	958	9	9.36	2.7	164.4	0	-4,-5	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000177418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000177099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176539	ENSMUSP00000135612	TRANSLATION	protein_coding	stop	-	3	257	9	2.61	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000176316	ENSMUSP00000135808	TRANSLATION	protein_coding	stop	-	2	126	9	0	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000176272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028059	Arhgef2	ENSMUST00000175911	ENSMUSP00000135428	TRANSLATION	protein_coding	-	-	5	588	9	9.36	0	164.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000176307	ENSMUSP00000134843	TRANSLATION	protein_coding	stop	-	5	89	9	0	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000029694	ENSMUSP00000029694	TRANSLATION	protein_coding	-	CCDS17481.1	1	985	9	9.36	2.7	164.4	0	-4,-6	-	-	18.586	PRINCIPAL:3
ENSMUSG00000028059	Arhgef2	ENSMUST00000176400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028059	Arhgef2	ENSMUST00000176243	ENSMUSP00000135771	TRANSLATION	protein_coding	stop	-	3	203	9	1.2	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000177120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000176804	ENSMUSP00000135397	TRANSLATION	protein_coding	-	-	5	983	9	9.36	2.7	164.4	0	-4,-6	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000177498	ENSMUSP00000134840	TRANSLATION	protein_coding	-	CCDS57220.1	1	968	9	9.36	1.5	164.4	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000177303	ENSMUSP00000135131	TRANSLATION	protein_coding	-	-	5	956	9	9.36	1.5	164.4	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000170653	ENSMUSP00000127843	TRANSLATION	protein_coding	-	CCDS57221.1	1	956	9	9.36	1.5	164.4	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000177023	ENSMUSP00000134859	TRANSLATION	protein_coding	stop	-	5	208	9	0.4	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000176226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028059	Arhgef2	ENSMUST00000176123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000177091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028059	Arhgef2	ENSMUST00000175779	ENSMUSP00000135177	TRANSLATION	protein_coding	-	-	5	970	9	9.36	3.9	164.4	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000028059	Arhgef2	ENSMUST00000176879	ENSMUSP00000134766	TRANSLATION	protein_coding	stop	-	2	130	9	0	0	30	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028059	Arhgef2	ENSMUST00000175749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028059	Arhgef2	ENSMUST00000176401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052415	Tchh	ENSMUST00000064257	ENSMUSP00000069525	TRANSLATION	protein_coding	-	CCDS50980.1	5	1599	5	0.8	0.5	46.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000040151	Hs2st1	ENSMUST00000043325	ENSMUSP00000043066	TRANSLATION	protein_coding	-	CCDS17883.1	1	356	18	5.75	17.5	141.4	0	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000040151	Hs2st1	ENSMUST00000199680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040151	Hs2st1	ENSMUST00000160690	ENSMUSP00000123816	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000049593	Lce1h	ENSMUST00000051521	ENSMUSP00000058647	TRANSLATION	protein_coding	-	CCDS17570.1	1	140	0	0	0.5	26.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027677	Ttc14	ENSMUST00000108210	ENSMUSP00000103845	TRANSLATION	protein_coding	-	CCDS38410.1	5	766	0	3.21	0.5	17.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027677	Ttc14	ENSMUST00000117915	ENSMUSP00000112450	TRANSLATION	protein_coding	-	CCDS71232.1	1	714	0	3.21	0.5	17.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027677	Ttc14	ENSMUST00000196975	ENSMUSP00000142684	TRANSLATION	protein_coding	-	-	1	386	0	3.078	0	17.2	0	-4,-7	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000027677	Ttc14	ENSMUST00000200271	ENSMUSP00000143738	TRANSLATION	protein_coding	-	CCDS79895.1	1	435	0	3.078	0.5	17.2	0	-4,0	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000027677	Ttc14	ENSMUST00000196369	ENSMUSP00000142863	TRANSLATION	nonsense_mediated_decay	start	-	1	336	0	3.078	0	17.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027677	Ttc14	ENSMUST00000200559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027677	Ttc14	ENSMUST00000199222	ENSMUSP00000142935	TRANSLATION	nonsense_mediated_decay	-	-	1	433	0	2.88	1.2	17.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027677	Ttc14	ENSMUST00000196139	ENSMUSP00000143173	TRANSLATION	protein_coding	stop	-	3	217	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027677	Ttc14	ENSMUST00000099153	ENSMUSP00000096757	TRANSLATION	protein_coding	-	CCDS17303.1	1	438	0	3.078	2.7	17.2	0	-4,-7	-	-	11.736	PRINCIPAL:3
ENSMUSG00000027677	Ttc14	ENSMUST00000198529	ENSMUSP00000143073	TRANSLATION	protein_coding	stop	-	1	408	0	2.476	0	15.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027677	Ttc14	ENSMUST00000197592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027677	Ttc14	ENSMUST00000199523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078780	Gm5150	ENSMUST00000108347	ENSMUSP00000103984	TRANSLATION	protein_coding	-	CCDS38395.1	1	299	0	2.54	0.5	107.2	1	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078780	Gm5150	ENSMUST00000194367	ENSMUSP00000141397	TRANSLATION	protein_coding	-	CCDS38395.1	5	299	0	2.54	0.5	107.2	1	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000068739	Sars	ENSMUST00000132467	ENSMUSP00000120879	TRANSLATION	protein_coding	stop	-	5	352	17	8.5	0	192.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068739	Sars	ENSMUST00000090553	ENSMUSP00000088041	TRANSLATION	protein_coding	-	CCDS57254.1	1	512	22	11.8	11.6	234.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000068739	Sars	ENSMUST00000153499	ENSMUSP00000118676	TRANSLATION	protein_coding	stop	-	5	186	2	4	0	72.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068739	Sars	ENSMUST00000197647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068739	Sars	ENSMUST00000102625	ENSMUSP00000099685	TRANSLATION	protein_coding	-	CCDS17760.1	1	536	22	11.425	3.9	206.3	0	-4,-5	-	-	16.374	MINOR
ENSMUSG00000101860	Mindy4b-ps	ENSMUST00000191174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101860	Mindy4b-ps	ENSMUST00000191233	ENSMUSP00000151654	TRANSLATION	protein_coding	-	-	5	457	0	0	0	434.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000101860	Mindy4b-ps	ENSMUST00000212169	ENSMUSP00000151582	TRANSLATION	protein_coding	start	-	5	295	0	0	0	273.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049741	Rxfp4	ENSMUST00000063119	ENSMUSP00000058732	TRANSLATION	protein_coding	-	CCDS17482.1	-	414	0	0.48	0.5	139	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027977	Ndst3	ENSMUST00000029602	ENSMUSP00000029602	TRANSLATION	protein_coding	-	CCDS17818.1	1	873	18	8.38	1.5	969.7	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027977	Ndst3	ENSMUST00000172537	ENSMUSP00000133657	TRANSLATION	protein_coding	-	CCDS17818.1	5	873	18	8.38	1.5	969.7	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027977	Ndst3	ENSMUST00000199825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027977	Ndst3	ENSMUST00000154668	ENSMUSP00000118207	TRANSLATION	protein_coding	-	CCDS17818.1	5	873	18	8.38	1.5	969.7	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027977	Ndst3	ENSMUST00000199046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027977	Ndst3	ENSMUST00000137404	ENSMUSP00000118796	TRANSLATION	nonsense_mediated_decay	-	-	1	642	7	2.616	0	826.1	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000027977	Ndst3	ENSMUST00000132896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027977	Ndst3	ENSMUST00000132112	ENSMUSP00000120623	TRANSLATION	protein_coding	-	CCDS80013.1	1	458	18	8.38	0.5	339.9	0	-4,-7	-	-	12	MINOR
ENSMUSG00000027977	Ndst3	ENSMUST00000124803	ENSMUSP00000122617	TRANSLATION	protein_coding	-	CCDS80013.1	1	458	18	8.38	0.5	339.9	0	-4,-7	-	-	12	MINOR
ENSMUSG00000063767	S100a7a	ENSMUST00000212471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063767	S100a7a	ENSMUST00000079286	ENSMUSP00000078268	TRANSLATION	protein_coding	-	CCDS17541.1	1	108	12	1.6	6.4	71.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027894	Slc6a17	ENSMUST00000166736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027894	Slc6a17	ENSMUST00000170429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027894	Slc6a17	ENSMUST00000167975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027894	Slc6a17	ENSMUST00000167898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027894	Slc6a17	ENSMUST00000171029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027894	Slc6a17	ENSMUST00000168211	ENSMUSP00000131888	TRANSLATION	nonsense_mediated_decay	start	-	1	686	8	8.95	0	743.1	12	-4,-5	-	-	-1	MINOR
ENSMUSG00000027894	Slc6a17	ENSMUST00000169413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027894	Slc6a17	ENSMUST00000169449	ENSMUSP00000129379	TRANSLATION	protein_coding	-	CCDS79998.1	1	727	8	8.95	14.8	743.1	12	-4,-6	-	-	21.976	ALTERNATIVE:1
ENSMUSG00000027894	Slc6a17	ENSMUST00000029499	ENSMUSP00000029499	TRANSLATION	protein_coding	-	CCDS38591.1	1	724	8	8.95	14.8	743.5	12	-4,-6	-	-	22	PRINCIPAL:3
ENSMUSG00000027894	Slc6a17	ENSMUST00000166892	ENSMUSP00000129588	TRANSLATION	protein_coding	stop	-	2	116	5	1.75	0	106.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074433	Lce3e	ENSMUST00000098886	ENSMUSP00000096484	TRANSLATION	protein_coding	-	CCDS57229.1	3	98	0	0	0.5	102.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050192	Eif5a2	ENSMUST00000060500	ENSMUSP00000050289	TRANSLATION	protein_coding	-	CCDS17277.1	1	153	0	3.5	17.5	93.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027893	Ahcyl1	ENSMUST00000144864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027893	Ahcyl1	ENSMUST00000138091	ENSMUSP00000117909	TRANSLATION	nonsense_mediated_decay	start	-	5	182	5	4.1	0	190.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027893	Ahcyl1	ENSMUST00000029490	ENSMUSP00000029490	TRANSLATION	protein_coding	-	CCDS38593.1	1	530	43	13.25	6.6	494.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027893	Ahcyl1	ENSMUST00000138116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027893	Ahcyl1	ENSMUST00000153530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027893	Ahcyl1	ENSMUST00000153623	ENSMUSP00000121510	TRANSLATION	protein_coding	stop	-	3	210	8	5	0	221	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027893	Ahcyl1	ENSMUST00000137583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027893	Ahcyl1	ENSMUST00000151935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028078	Dclk2	ENSMUST00000193769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028078	Dclk2	ENSMUST00000193400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028078	Dclk2	ENSMUST00000195561	ENSMUSP00000142267	TRANSLATION	protein_coding	-	CCDS79936.1	1	755	18	12.72	0.5	388.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028078	Dclk2	ENSMUST00000192260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028078	Dclk2	ENSMUST00000193632	ENSMUSP00000141866	TRANSLATION	protein_coding	-	-	5	711	18	12.25	0	388.1	0	-4,-5	-	-	17.058	ALTERNATIVE:2
ENSMUSG00000028078	Dclk2	ENSMUST00000194452	ENSMUSP00000141816	TRANSLATION	protein_coding	-	CCDS79935.1	1	591	18	10.21	1.7	348.2	0	-4,-5	-	-	10.584	MINOR
ENSMUSG00000028078	Dclk2	ENSMUST00000191752	ENSMUSP00000141707	TRANSLATION	protein_coding	-	-	1	708	18	11.75	0	355.7	0	-4,-5	-	-	14.118	MINOR
ENSMUSG00000028078	Dclk2	ENSMUST00000192773	ENSMUSP00000141567	TRANSLATION	nonsense_mediated_decay	-	-	2	641	18	11.51	0	357.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028078	Dclk2	ENSMUST00000029719	ENSMUSP00000029719	TRANSLATION	protein_coding	-	CCDS17448.1	1	756	18	12.66	0.5	388.1	0	-4,-5	-	-	17.88	PRINCIPAL:3
ENSMUSG00000046743	Fat4	ENSMUST00000129182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046743	Fat4	ENSMUST00000061260	ENSMUSP00000061836	TRANSLATION	protein_coding	-	CCDS17325.1	1	4981	314	9.35	6.3	2299.6	0	0,3	-	-	20	PRINCIPAL:1
ENSMUSG00000046259	Sprr2h	ENSMUST00000059845	ENSMUSP00000053849	TRANSLATION	protein_coding	-	CCDS17553.1	1	108	0	0	0.5	54.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046259	Sprr2h	ENSMUST00000191886	ENSMUSP00000141424	TRANSLATION	protein_coding	-	-	1	36	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042626	Shc1	ENSMUST00000039110	ENSMUSP00000035361	TRANSLATION	protein_coding	-	CCDS17508.1	1	469	0	7.83	6.3	224.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000042626	Shc1	ENSMUST00000107417	ENSMUSP00000103040	TRANSLATION	protein_coding	-	-	1	424	0	6.83	1.2	224.8	0	-4,-7	-	-	10.078	MINOR
ENSMUSG00000042626	Shc1	ENSMUST00000154791	ENSMUSP00000123635	TRANSLATION	protein_coding	stop	-	3	118	0	3.33	0	43.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042626	Shc1	ENSMUST00000191485	ENSMUSP00000140336	TRANSLATION	protein_coding	-	CCDS17508.1	1	469	0	7.83	6.3	224.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000042626	Shc1	ENSMUST00000146306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042626	Shc1	ENSMUST00000153334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042626	Shc1	ENSMUST00000128238	ENSMUSP00000119293	TRANSLATION	protein_coding	stop	-	3	262	0	5.33	0	62.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042626	Shc1	ENSMUST00000094378	ENSMUSP00000091940	TRANSLATION	protein_coding	-	CCDS50962.1	1	579	0	7.83	6.3	224.8	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000042626	Shc1	ENSMUST00000137793	ENSMUSP00000117190	TRANSLATION	protein_coding	stop	-	3	280	0	5.83	0	161.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042626	Shc1	ENSMUST00000125036	ENSMUSP00000115509	TRANSLATION	protein_coding	stop	-	3	172	0	4.5	0	152.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000108078	ENSMUSP00000103713	TRANSLATION	protein_coding	-	CCDS38422.2	1	464	3	0	6.3	558.5	0	-4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000037818	Abhd18	ENSMUST00000205065	ENSMUSP00000145095	TRANSLATION	nonsense_mediated_decay	-	-	1	151	0	0	0	207.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000203892	ENSMUSP00000145150	TRANSLATION	protein_coding	-	-	1	151	0	0	0	207.6	0	-4,-1	-	-	0	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000204797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037818	Abhd18	ENSMUST00000204464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037818	Abhd18	ENSMUST00000204496	ENSMUSP00000145007	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	0	0	51.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000159774	ENSMUSP00000124430	TRANSLATION	protein_coding	-	-	5	464	3	0	6.3	558.5	0	-4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000037818	Abhd18	ENSMUST00000203214	ENSMUSP00000144946	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0	0	50.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000203472	ENSMUSP00000145313	TRANSLATION	protein_coding	-	-	1	75	0	0	0	115.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000203650	ENSMUSP00000145006	TRANSLATION	protein_coding	-	-	5	130	1	0	0	227.4	0	-4,-7	-	-	0.999	MINOR
ENSMUSG00000037818	Abhd18	ENSMUST00000108077	ENSMUSP00000103712	TRANSLATION	protein_coding	-	CCDS38422.2	1	464	3	0	6.3	558.5	0	-4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000027884	Clcc1	ENSMUST00000156811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027884	Clcc1	ENSMUST00000130352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027884	Clcc1	ENSMUST00000106613	ENSMUSP00000102224	TRANSLATION	protein_coding	-	CCDS51047.1	1	544	0	0	0.5	1074.7	3	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000027884	Clcc1	ENSMUST00000125274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027884	Clcc1	ENSMUST00000029483	ENSMUSP00000029483	TRANSLATION	protein_coding	-	CCDS17766.1	5	539	0	0	0.5	1074.7	3	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000027884	Clcc1	ENSMUST00000106609	ENSMUSP00000102220	TRANSLATION	protein_coding	-	CCDS17766.1	1	539	0	0	0.5	1074.7	3	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000027884	Clcc1	ENSMUST00000124384	ENSMUSP00000118529	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	156.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000027884	Clcc1	ENSMUST00000139016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046818	Ddit4l	ENSMUST00000165845	ENSMUSP00000127567	TRANSLATION	protein_coding	stop	-	1	100	0	0.6	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046818	Ddit4l	ENSMUST00000053855	ENSMUSP00000058896	TRANSLATION	protein_coding	-	CCDS17863.1	1	193	0	1.24	8.8	157.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046818	Ddit4l	ENSMUST00000167564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037325	Bbs7	ENSMUST00000040148	ENSMUSP00000047273	TRANSLATION	protein_coding	-	-	1	715	3	0	11.8	0	0	-4,-6	-	-	6	ALTERNATIVE:1
ENSMUSG00000037325	Bbs7	ENSMUST00000199136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037325	Bbs7	ENSMUST00000129671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037325	Bbs7	ENSMUST00000142333	ENSMUSP00000118961	TRANSLATION	protein_coding	stop	-	2	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037325	Bbs7	ENSMUST00000108155	ENSMUSP00000103790	TRANSLATION	protein_coding	-	-	5	673	3	0	1.2	0	0	-4,-6	-	-	3.057	MINOR
ENSMUSG00000037325	Bbs7	ENSMUST00000108156	ENSMUSP00000103791	TRANSLATION	protein_coding	-	CCDS17314.2	1	715	3	0	11.8	0	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000058952	Cfi	ENSMUST00000200206	ENSMUSP00000142975	TRANSLATION	protein_coding	stop	-	3	145	0	2	0	30.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000058952	Cfi	ENSMUST00000077918	ENSMUSP00000077074	TRANSLATION	protein_coding	-	CCDS17835.1	1	603	18	10.47	0.5	339.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037072	Selenof	ENSMUST00000144859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037072	Selenof	ENSMUST00000151086	ENSMUSP00000142750	TRANSLATION	protein_coding	start	-	2	45	0	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037072	Selenof	ENSMUST00000198936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037072	Selenof	ENSMUST00000198279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037072	Selenof	ENSMUST00000106211	ENSMUSP00000101817	TRANSLATION	protein_coding	-	-	3	121	0	0.66	1.2	0	0	2,-2	-	-	1.722	MINOR
ENSMUSG00000037072	Selenof	ENSMUST00000082437	ENSMUSP00000046910	TRANSLATION	protein_coding	-	CCDS17884.1	1	162	0	2.41	8.8	98.5	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037892	Pcdh18	ENSMUST00000195086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037892	Pcdh18	ENSMUST00000035931	ENSMUSP00000039245	TRANSLATION	protein_coding	-	CCDS17334.1	1	1134	54	1.6	7.6	315.5	2	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000037892	Pcdh18	ENSMUST00000193600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037892	Pcdh18	ENSMUST00000194603	ENSMUSP00000142135	TRANSLATION	protein_coding	start	-	1	455	15	0.6	0	96.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000037892	Pcdh18	ENSMUST00000191794	ENSMUSP00000141995	TRANSLATION	protein_coding	-	-	5	917	54	1.6	2.4	315.5	2	3,-1	-	-	18.636	MINOR
ENSMUSG00000027833	Shox2	ENSMUST00000162098	ENSMUSP00000123838	TRANSLATION	protein_coding	start	-	1	240	0	2.1	0	119.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027833	Shox2	ENSMUST00000029422	ENSMUSP00000029422	TRANSLATION	protein_coding	-	CCDS17393.1	1	331	0	2.1	5.3	119.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027833	Shox2	ENSMUST00000195261	ENSMUSP00000141625	TRANSLATION	protein_coding	stop	-	5	108	0	1.9	0	88.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027833	Shox2	ENSMUST00000162439	ENSMUSP00000124924	TRANSLATION	protein_coding	-	CCDS79922.1	1	190	0	1.9	1.7	119.6	0	-4,-5	-	-	11.756	MINOR
ENSMUSG00000027833	Shox2	ENSMUST00000162060	ENSMUSP00000125031	TRANSLATION	protein_coding	-	CCDS79922.1	3	190	0	1.9	1.7	119.6	0	-4,-5	-	-	11.756	MINOR
ENSMUSG00000060913	Trim55	ENSMUST00000029139	ENSMUSP00000029139	TRANSLATION	protein_coding	-	CCDS38399.1	2	545	15	2.9	1.5	67	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060913	Trim55	ENSMUST00000195744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028111	Ctsk	ENSMUST00000015664	ENSMUSP00000015664	TRANSLATION	protein_coding	-	CCDS17615.1	1	329	4	7	6.3	319.9	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000038495	Otud7b	ENSMUST00000035519	ENSMUSP00000046413	TRANSLATION	protein_coding	-	CCDS17629.1	1	840	0	9.38	1.5	137.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038495	Otud7b	ENSMUST00000135263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038495	Otud7b	ENSMUST00000090785	ENSMUSP00000088291	TRANSLATION	protein_coding	-	CCDS17629.1	1	840	0	9.38	1.5	137.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038495	Otud7b	ENSMUST00000146660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038495	Otud7b	ENSMUST00000132980	ENSMUSP00000115699	TRANSLATION	protein_coding	stop	-	5	101	0	1.55	0	23.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038495	Otud7b	ENSMUST00000138206	ENSMUSP00000121847	TRANSLATION	protein_coding	stop	-	3	195	0	3.3	0	23.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038495	Otud7b	ENSMUST00000098849	ENSMUSP00000096449	TRANSLATION	protein_coding	-	CCDS17629.1	5	840	0	9.38	1.5	137.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038495	Otud7b	ENSMUST00000196172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068798	Rap1a	ENSMUST00000198004	ENSMUSP00000142733	TRANSLATION	protein_coding	stop	-	5	109	18	2.75	0	118.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068798	Rap1a	ENSMUST00000090678	ENSMUSP00000088174	TRANSLATION	protein_coding	-	CCDS17711.1	1	184	25	4.35	19.5	189.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000068798	Rap1a	ENSMUST00000197094	ENSMUSP00000142419	TRANSLATION	protein_coding	-	-	3	118	22	2.85	0	60.7	0	-4,-6	-	-	7.002	MINOR
ENSMUSG00000068798	Rap1a	ENSMUST00000199969	ENSMUSP00000142634	TRANSLATION	nonsense_mediated_decay	-	-	5	159	25	3.75	0	182.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028057	Rit1	ENSMUST00000165846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028057	Rit1	ENSMUST00000029692	ENSMUSP00000029692	TRANSLATION	protein_coding	-	CCDS17484.1	1	219	23	5.25	6.5	173.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000028057	Rit1	ENSMUST00000166234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028057	Rit1	ENSMUST00000171645	ENSMUSP00000127206	TRANSLATION	protein_coding	stop	-	3	109	16	3.25	0	103.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028057	Rit1	ENSMUST00000172187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028057	Rit1	ENSMUST00000172333	ENSMUSP00000131384	TRANSLATION	nonsense_mediated_decay	-	-	2	37	7	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028057	Rit1	ENSMUST00000170377	ENSMUSP00000125858	TRANSLATION	nonsense_mediated_decay	-	-	1	90	17	2.25	0	61.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028057	Rit1	ENSMUST00000172252	ENSMUSP00000130464	TRANSLATION	protein_coding	-	CCDS50952.1	3	183	16	4.25	3.7	148.4	0	-4,-5	-	-	10.786	MINOR
ENSMUSG00000039710	Slc7a12	ENSMUST00000120484	ENSMUSP00000112799	TRANSLATION	protein_coding	-	-	5	194	0	0.42	0	0	5	1,-3	-	-	1.53	MINOR
ENSMUSG00000039710	Slc7a12	ENSMUST00000120801	ENSMUSP00000113566	TRANSLATION	protein_coding	-	-	5	194	0	0.42	0	0	5	1,-3	-	-	1.53	MINOR
ENSMUSG00000039710	Slc7a12	ENSMUST00000037321	ENSMUSP00000038574	TRANSLATION	protein_coding	-	CCDS17246.1	1	465	0	1.644	0.5	75.1	9	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000090527	Aadacl2fm2	ENSMUST00000168156	ENSMUSP00000128877	TRANSLATION	protein_coding	-	CCDS50916.1	5	401	3	2.18	0.5	34.3	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051076	Vtcn1	ENSMUST00000054791	ENSMUSP00000057721	TRANSLATION	protein_coding	-	CCDS17677.1	1	283	0	1.78	5.3	43.9	0	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028070	Naxe	ENSMUST00000029708	ENSMUSP00000029708	TRANSLATION	protein_coding	-	CCDS17464.1	1	282	22	6	0.5	126.5	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000093865	Lrit3	ENSMUST00000179187	ENSMUSP00000136912	TRANSLATION	protein_coding	-	-	5	560	2	1.32	0	103	2	4,-1	-	-	12.236	MINOR
ENSMUSG00000093865	Lrit3	ENSMUST00000185462	ENSMUSP00000140184	TRANSLATION	protein_coding	-	CCDS57256.2	1	681	2	1.48	0.5	121.6	2	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000093865	Lrit3	ENSMUST00000188978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028270	Gbp2	ENSMUST00000169572	ENSMUSP00000129039	TRANSLATION	nonsense_mediated_decay	-	-	5	117	16	2	0	158	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028270	Gbp2	ENSMUST00000165774	ENSMUSP00000132435	TRANSLATION	protein_coding	-	CCDS17880.1	1	589	19	10.33	1.5	796.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027984	Hadh	ENSMUST00000152427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027984	Hadh	ENSMUST00000029610	ENSMUSP00000029610	TRANSLATION	protein_coding	-	CCDS38640.1	1	314	38	7.75	10.3	329.3	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000028109	Hormad1	ENSMUST00000107154	ENSMUSP00000102772	TRANSLATION	protein_coding	-	CCDS38547.1	1	374	0	2.994	0.5	211.5	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000028109	Hormad1	ENSMUST00000090797	ENSMUSP00000088303	TRANSLATION	protein_coding	-	CCDS38547.1	1	374	0	2.994	0.5	211.5	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000028109	Hormad1	ENSMUST00000029754	ENSMUSP00000029754	TRANSLATION	protein_coding	-	CCDS71292.1	1	392	0	2.994	1.5	211.5	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000028109	Hormad1	ENSMUST00000171191	ENSMUSP00000127180	TRANSLATION	protein_coding	-	CCDS38547.1	1	374	0	2.994	0.5	211.5	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000033721	Vav3	ENSMUST00000137871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033721	Vav3	ENSMUST00000148866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033721	Vav3	ENSMUST00000126179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033721	Vav3	ENSMUST00000106576	ENSMUSP00000102186	TRANSLATION	protein_coding	-	CCDS59650.1	1	287	0	6.5	1.7	156	0	-4,-6	-	-	0.243	MINOR
ENSMUSG00000033721	Vav3	ENSMUST00000128033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033721	Vav3	ENSMUST00000046864	ENSMUSP00000036270	TRANSLATION	protein_coding	-	CCDS17773.1	1	847	8	21.3	9.6	445.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000039146	Ifi44l	ENSMUST00000046739	ENSMUSP00000044765	TRANSLATION	protein_coding	start	-	1	157	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000027995	Tlr2	ENSMUST00000029623	ENSMUSP00000029623	TRANSLATION	protein_coding	-	CCDS17435.1	1	784	0	1	0.5	173.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000008763	Man1a2	ENSMUST00000196250	ENSMUSP00000143695	TRANSLATION	nonsense_mediated_decay	-	-	5	122	0	0	0	0	2	-4,0	-	-	-1	MINOR
ENSMUSG00000008763	Man1a2	ENSMUST00000146818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008763	Man1a2	ENSMUST00000008907	ENSMUSP00000008907	TRANSLATION	protein_coding	-	CCDS17676.1	1	641	0	11.13	10.4	512	2	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000008763	Man1a2	ENSMUST00000123442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008763	Man1a2	ENSMUST00000130066	ENSMUSP00000116489	TRANSLATION	protein_coding	start/stop	-	3	246	0	4.38	0	137.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008763	Man1a2	ENSMUST00000133642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042613	Pbxip1	ENSMUST00000038942	ENSMUSP00000040429	TRANSLATION	protein_coding	-	CCDS17510.1	1	727	0	0	0.5	0	1	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042613	Pbxip1	ENSMUST00000146630	ENSMUSP00000115904	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042613	Pbxip1	ENSMUST00000141340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042613	Pbxip1	ENSMUST00000145753	ENSMUSP00000121658	TRANSLATION	protein_coding	stop	-	5	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042613	Pbxip1	ENSMUST00000130858	ENSMUSP00000118496	TRANSLATION	protein_coding	stop	-	3	249	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000105204	Gm43738	ENSMUST00000200659	ENSMUSP00000142694	TRANSLATION	protein_coding,RT	-	-	5	862	18	12.032	0	303.4	0	0,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000027890	Gstm4	ENSMUST00000178808	ENSMUSP00000136643	TRANSLATION	protein_coding	-	CCDS51045.1	1	184	7	5.25	2.7	97	0	-4,-5	-	-	11.562	MINOR
ENSMUSG00000027890	Gstm4	ENSMUST00000106670	ENSMUSP00000102281	TRANSLATION	protein_coding	-	CCDS51045.1	3	184	7	5.25	2.7	97	0	-4,-5	-	-	11.562	MINOR
ENSMUSG00000027890	Gstm4	ENSMUST00000029489	ENSMUSP00000029489	TRANSLATION	protein_coding	-	CCDS17748.1	1	218	10	6.5	9.6	139.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000033502	Cdc14a	ENSMUST00000239145	ENSMUSP00000159189	TRANSLATION	protein_coding	-	-	-	574	11	7.28	0.5	178.2	0	-4,-2	-	-	10.908	MINOR
ENSMUSG00000033502	Cdc14a	ENSMUST00000127704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033502	Cdc14a	ENSMUST00000106491	ENSMUSP00000102100	TRANSLATION	protein_coding	-	CCDS51058.1	1	554	11	7.01	0.5	186	0	-4,-5	-	-	10.836	MINOR
ENSMUSG00000033502	Cdc14a	ENSMUST00000136994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033502	Cdc14a	ENSMUST00000090464	ENSMUSP00000087950	TRANSLATION	protein_coding	-	CCDS38611.1	1	603	11	8.36	0.5	260.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033502	Cdc14a	ENSMUST00000197830	ENSMUSP00000142479	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	0.75	0	28.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033502	Cdc14a	ENSMUST00000148857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033502	Cdc14a	ENSMUST00000199454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028125	Abca4	ENSMUST00000141135	ENSMUSP00000143560	TRANSLATION	protein_coding	-	-	1	1102	10	5.42	0	222	6	-4,-5	-	-	0	MINOR
ENSMUSG00000028125	Abca4	ENSMUST00000136358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028125	Abca4	ENSMUST00000013995	ENSMUSP00000013995	TRANSLATION	protein_coding	-	CCDS38617.1	1	2310	20	9.62	1.5	380.6	7	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028125	Abca4	ENSMUST00000136624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028125	Abca4	ENSMUST00000132199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028125	Abca4	ENSMUST00000150738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028125	Abca4	ENSMUST00000140913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028125	Abca4	ENSMUST00000144949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028125	Abca4	ENSMUST00000197728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028125	Abca4	ENSMUST00000137616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028132	Tlcd4	ENSMUST00000155309	ENSMUSP00000120821	TRANSLATION	protein_coding	-	CCDS17800.1	1	276	0	0	0.5	111.6	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028132	Tlcd4	ENSMUST00000200402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028132	Tlcd4	ENSMUST00000151058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028132	Tlcd4	ENSMUST00000137234	ENSMUSP00000122001	TRANSLATION	protein_coding	stop	-	3	138	0	0	0	39.2	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028132	Tlcd4	ENSMUST00000135818	ENSMUSP00000114755	TRANSLATION	protein_coding	-	-	1	231	0	0	0	98.3	7	-4,-7	-	-	5.202	MINOR
ENSMUSG00000028132	Tlcd4	ENSMUST00000128909	ENSMUSP00000119468	TRANSLATION	protein_coding	-	CCDS17800.1	1	276	0	0	0.5	111.6	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028132	Tlcd4	ENSMUST00000123427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028132	Tlcd4	ENSMUST00000029777	ENSMUSP00000029777	TRANSLATION	protein_coding	-	CCDS17800.1	1	276	0	0	0.5	111.6	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050931	Sgms2	ENSMUST00000090246	ENSMUSP00000087713	TRANSLATION	protein_coding	-	CCDS17843.1	1	365	0	0	14.8	91.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000050931	Sgms2	ENSMUST00000126569	ENSMUSP00000114192	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050931	Sgms2	ENSMUST00000200431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050931	Sgms2	ENSMUST00000197057	ENSMUSP00000143170	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027951	Adar	ENSMUST00000123691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027951	Adar	ENSMUST00000107405	ENSMUSP00000103028	TRANSLATION	protein_coding	-	CCDS50963.1	1	1178	20	10.53	1.5	637.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000027951	Adar	ENSMUST00000121094	ENSMUSP00000112969	TRANSLATION	protein_coding	-	-	1	634	20	8.32	0	424	0	-4,-5	-	-	7.578	MINOR
ENSMUSG00000027951	Adar	ENSMUST00000029563	ENSMUSP00000029563	TRANSLATION	protein_coding	-	CCDS17513.1	1	1152	20	10.32	1.5	637.1	0	-4,-7	-	-	17.58	PRINCIPAL:3
ENSMUSG00000027951	Adar	ENSMUST00000098924	ENSMUSP00000096525	TRANSLATION	protein_coding	-	CCDS17514.1	1	930	20	10.13	1.5	545.4	0	-4,-5	-	-	11.7	MINOR
ENSMUSG00000027951	Adar	ENSMUST00000150637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027951	Adar	ENSMUST00000197253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027951	Adar	ENSMUST00000131030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027951	Adar	ENSMUST00000118341	ENSMUSP00000113453	TRANSLATION	protein_coding	-	-	1	660	20	8.53	0	424	0	-4,-5	-	-	7.998	MINOR
ENSMUSG00000028017	Egf	ENSMUST00000197713	ENSMUSP00000143108	TRANSLATION	nonsense_mediated_decay	-	-	1	254	0	4.68	0	139.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028017	Egf	ENSMUST00000199209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028017	Egf	ENSMUST00000199615	ENSMUSP00000142497	TRANSLATION	protein_coding	-	-	1	675	7	9.74	0	204.7	2	-4,-5	-	-	0	MINOR
ENSMUSG00000028017	Egf	ENSMUST00000029653	ENSMUSP00000029653	TRANSLATION	protein_coding	-	CCDS17833.1	1	1217	17	14.08	0.5	310.8	2	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028017	Egf	ENSMUST00000198093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028017	Egf	ENSMUST00000197079	ENSMUSP00000143075	TRANSLATION	protein_coding	-	CCDS80020.1	1	716	13	10.54	0.5	240.4	2	-4,-5	-	-	5.112	MINOR
ENSMUSG00000028017	Egf	ENSMUST00000197250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028017	Egf	ENSMUST00000199272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028017	Egf	ENSMUST00000198816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078783	Gm9733	ENSMUST00000108361	ENSMUSP00000103998	TRANSLATION	protein_coding	-	CCDS38393.1	1	178	0	1.57	0.5	62.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028256	Odf2l	ENSMUST00000106192	ENSMUSP00000101798	TRANSLATION	protein_coding	-	CCDS17891.1	5	589	0	0	2.7	0	0	-4,-5	-	-	0.586	PRINCIPAL:3
ENSMUSG00000028256	Odf2l	ENSMUST00000196857	ENSMUSP00000143513	TRANSLATION	protein_coding	stop	-	5	203	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000195926	ENSMUSP00000142932	TRANSLATION	protein_coding	start/stop	-	5	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000200353	ENSMUSP00000143183	TRANSLATION	nonsense_mediated_decay	start	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000029920	ENSMUSP00000029920	TRANSLATION	protein_coding	-	CCDS51088.1	1	546	0	0	1.5	0	0	-4,-5	-	-	0.172	ALTERNATIVE:2
ENSMUSG00000028256	Odf2l	ENSMUST00000200014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028256	Odf2l	ENSMUST00000098538	ENSMUSP00000096140	TRANSLATION	protein_coding	-	CCDS51087.1	1	642	0	0	3.9	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000028256	Odf2l	ENSMUST00000098539	ENSMUSP00000096141	TRANSLATION	protein_coding	-	CCDS17891.1	1	589	0	0	2.7	0	0	-4,-5	-	-	0.586	PRINCIPAL:3
ENSMUSG00000028256	Odf2l	ENSMUST00000196898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028256	Odf2l	ENSMUST00000197657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028256	Odf2l	ENSMUST00000199435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028256	Odf2l	ENSMUST00000198808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028256	Odf2l	ENSMUST00000198764	ENSMUSP00000142571	TRANSLATION	protein_coding	start/stop	-	3	255	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000199124	ENSMUSP00000142780	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000199307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028256	Odf2l	ENSMUST00000196426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028256	Odf2l	ENSMUST00000196552	ENSMUSP00000143025	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028256	Odf2l	ENSMUST00000199045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011463	Cpb1	ENSMUST00000137855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011463	Cpb1	ENSMUST00000125945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011463	Cpb1	ENSMUST00000011607	ENSMUSP00000011607	TRANSLATION	protein_coding	-	CCDS17263.1	1	415	9	10.1	4.1	384	0	2,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028137	Celf3	ENSMUST00000199148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028137	Celf3	ENSMUST00000197677	ENSMUSP00000143089	TRANSLATION	protein_coding	stop	-	3	182	0	3.3	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000198796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028137	Celf3	ENSMUST00000199159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028137	Celf3	ENSMUST00000198067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028137	Celf3	ENSMUST00000198384	ENSMUSP00000142542	TRANSLATION	protein_coding	stop	-	5	231	0	3.3	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000029784	ENSMUSP00000029784	TRANSLATION	protein_coding	-	CCDS38536.1	1	465	0	7.79	6.5	177.3	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000028137	Celf3	ENSMUST00000199884	ENSMUSP00000142967	TRANSLATION	protein_coding	stop	-	2	31	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000197558	ENSMUSP00000143733	TRANSLATION	protein_coding	-	CCDS79973.1	1	370	0	5.9	0.5	129.9	0	-4,-5	-	-	5.376	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000198316	ENSMUSP00000142412	TRANSLATION	protein_coding	-	CCDS79974.1	1	389	0	6.04	6.5	129.9	0	-4,-5	-	-	7.658	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000200342	ENSMUSP00000143344	TRANSLATION	protein_coding	-	CCDS79972.1	1	494	0	7.79	0.5	177.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000028137	Celf3	ENSMUST00000197033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028137	Celf3	ENSMUST00000199775	ENSMUSP00000143532	TRANSLATION	protein_coding	-	-	5	416	0	7.79	3.6	177.3	0	-4,-5	-	-	12.946	ALTERNATIVE:2
ENSMUSG00000028137	Celf3	ENSMUST00000197699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028137	Celf3	ENSMUST00000196985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062127	Cttnbp2nl	ENSMUST00000077548	ENSMUSP00000076751	TRANSLATION	protein_coding	-	CCDS17707.1	1	638	0	0	3.9	229.6	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000062127	Cttnbp2nl	ENSMUST00000197437	ENSMUSP00000143282	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	210.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062127	Cttnbp2nl	ENSMUST00000098763	ENSMUSP00000096359	TRANSLATION	protein_coding	-	CCDS17707.1	1	638	0	0	3.9	229.6	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000062127	Cttnbp2nl	ENSMUST00000199002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027761	Aadac	ENSMUST00000029325	ENSMUSP00000029325	TRANSLATION	protein_coding	-	CCDS17375.1	1	398	3	2.5	4.1	26.7	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027761	Aadac	ENSMUST00000194896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027761	Aadac	ENSMUST00000151605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044313	Mab21l3	ENSMUST00000118411	ENSMUSP00000112730	TRANSLATION	protein_coding	-	CCDS17684.1	1	429	0	2.28	1.5	272.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044313	Mab21l3	ENSMUST00000061831	ENSMUSP00000059212	TRANSLATION	protein_coding	-	CCDS17684.1	1	429	0	2.28	1.5	272.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005625	Psmd4	ENSMUST00000071664	ENSMUSP00000071589	TRANSLATION	protein_coding	-	CCDS71287.1	1	379	0	8.51	0.5	120	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000005625	Psmd4	ENSMUST00000107237	ENSMUSP00000102857	TRANSLATION	protein_coding	-	CCDS38541.1	1	376	0	8.51	0.5	120	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000005625	Psmd4	ENSMUST00000117355	ENSMUSP00000113554	TRANSLATION	protein_coding	-	-	1	368	0	7.51	0	120	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000005625	Psmd4	ENSMUST00000143688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005625	Psmd4	ENSMUST00000147960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005625	Psmd4	ENSMUST00000140348	ENSMUSP00000114545	TRANSLATION	protein_coding	start	-	5	194	0	4.68	0	22.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005625	Psmd4	ENSMUST00000136868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005625	Psmd4	ENSMUST00000140280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074513	Arfip1	ENSMUST00000143514	ENSMUSP00000122964	TRANSLATION	protein_coding	-	CCDS38466.1	5	373	0	4	10.8	268.7	0	-4,-5	-	-	14.748	PRINCIPAL:3
ENSMUSG00000074513	Arfip1	ENSMUST00000107687	ENSMUSP00000103315	TRANSLATION	protein_coding	-	-	5	366	0	4	1	268.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000074513	Arfip1	ENSMUST00000098990	ENSMUSP00000096588	TRANSLATION	protein_coding	-	CCDS79931.1	1	341	0	4	11.7	268.7	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000038543	BC028528	ENSMUST00000171519	ENSMUSP00000127666	TRANSLATION	protein_coding	-	CCDS50998.1	1	148	0	0	0.5	207.6	0	2,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000038543	BC028528	ENSMUST00000145949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038543	BC028528	ENSMUST00000133611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038543	BC028528	ENSMUST00000090476	ENSMUSP00000102749	TRANSLATION	protein_coding	-	CCDS50998.1	2	148	0	0	0.5	207.6	0	2,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000038543	BC028528	ENSMUST00000036360	ENSMUSP00000046810	TRANSLATION	protein_coding	-	CCDS84656.1	1	147	0	0	0.5	203.1	0	2,-1	-	-	5.73	ALTERNATIVE:2
ENSMUSG00000094856	Gm21962	ENSMUST00000166899	ENSMUSP00000126626	TRANSLATION	protein_coding	start	-	-	338	6	0.6	0	28.2	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000028141	Oaz3	ENSMUST00000204980	ENSMUSP00000144790	TRANSLATION	protein_coding	start	-	5	56	2	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028141	Oaz3	ENSMUST00000199318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028141	Oaz3	ENSMUST00000199678	ENSMUSP00000143080	TRANSLATION	protein_coding	-	-	5	243	2	3.3186	1.5	55.7	0	-4,0	-	-	13.5	PRINCIPAL:5
ENSMUSG00000028141	Oaz3	ENSMUST00000204913	ENSMUSP00000145113	TRANSLATION	protein_coding	-	-	5	147	8	0.3	0	0	0	-4,0	-	-	6	MINOR
ENSMUSG00000028141	Oaz3	ENSMUST00000204548	ENSMUSP00000145079	TRANSLATION	protein_coding	-	-	5	102	8	0.3	0	0	0	-4,-6	-	-	6	MINOR
ENSMUSG00000028141	Oaz3	ENSMUST00000203883	ENSMUSP00000145484	TRANSLATION	protein_coding	-	-	5	198	2	3.3186	0	55.7	0	-4,-5	-	-	13.5	ALTERNATIVE:2
ENSMUSG00000028141	Oaz3	ENSMUST00000191506	ENSMUSP00000139408	TRANSLATION	protein_coding	start	-	5	242	2	3.3186	1.5	55.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028141	Oaz3	ENSMUST00000196799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000161471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004896	Rrnad1	ENSMUST00000160648	ENSMUSP00000131552	TRANSLATION	nonsense_mediated_decay	-	-	1	108	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004896	Rrnad1	ENSMUST00000164439	ENSMUSP00000125786	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004896	Rrnad1	ENSMUST00000159967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000160074	ENSMUSP00000125365	TRANSLATION	protein_coding	-	-	5	411	11	0	2.7	104.6	0	-4,-5	-	-	12.786	MINOR
ENSMUSG00000004896	Rrnad1	ENSMUST00000159091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000005016	ENSMUSP00000005016	TRANSLATION	protein_coding	-	CCDS17458.1	1	475	11	0	7.5	104.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000004896	Rrnad1	ENSMUST00000160068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004896	Rrnad1	ENSMUST00000168070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000161014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000159831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004896	Rrnad1	ENSMUST00000160143	ENSMUSP00000124113	TRANSLATION	protein_coding	-	-	5	277	11	0	0	51.8	0	-4,-2	-	-	8.832	MINOR
ENSMUSG00000027679	Dnajc19	ENSMUST00000117223	ENSMUSP00000113484	TRANSLATION	protein_coding	-	CCDS71233.1	1	130	0	1.2	0.5	0	0	0,-5	-	-	3.69	MINOR
ENSMUSG00000027679	Dnajc19	ENSMUST00000108195	ENSMUSP00000103830	TRANSLATION	protein_coding	-	CCDS38412.1	1	116	0	1.95	15	28.1	0	0,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027679	Dnajc19	ENSMUST00000120805	ENSMUSP00000113514	TRANSLATION	protein_coding	-	CCDS71234.1	2	110	0	1.95	0.5	28.1	0	-4,-2	-	-	12	MINOR
ENSMUSG00000027679	Dnajc19	ENSMUST00000197111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027679	Dnajc19	ENSMUST00000011029	ENSMUSP00000011029	TRANSLATION	protein_coding	-	CCDS38411.1	1	157	0	1.2	0.5	0	0	0,-5	-	-	3.69	MINOR
ENSMUSG00000091967	Vmn2r128	ENSMUST00000175971	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000091967	Vmn2r128	ENSMUST00000234658	ENSMUSP00000157322	TRANSLATION	protein_coding	start	-	-	428	0	2.08	0	228.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000004591	Pkn2	ENSMUST00000172916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004591	Pkn2	ENSMUST00000174099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004591	Pkn2	ENSMUST00000200315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004591	Pkn2	ENSMUST00000197529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004591	Pkn2	ENSMUST00000174680	ENSMUSP00000134041	TRANSLATION	protein_coding	start/stop	-	5	210	0	0	0	55.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004591	Pkn2	ENSMUST00000174422	ENSMUSP00000134559	TRANSLATION	protein_coding	-	-	5	967	19	8	3.6	423	0	-4,-5	-	-	18.982	ALTERNATIVE:2
ENSMUSG00000004591	Pkn2	ENSMUST00000173830	ENSMUSP00000133691	TRANSLATION	protein_coding	-	-	5	935	19	8	4.8	423	0	-4,-5	-	-	19.434	ALTERNATIVE:1
ENSMUSG00000004591	Pkn2	ENSMUST00000043812	ENSMUSP00000039566	TRANSLATION	protein_coding	-	CCDS51084.1	1	983	19	8	6.3	423	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000004591	Pkn2	ENSMUST00000173913	ENSMUSP00000134046	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004591	Pkn2	ENSMUST00000172521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004591	Pkn2	ENSMUST00000174169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004591	Pkn2	ENSMUST00000173615	ENSMUSP00000133419	TRANSLATION	nonsense_mediated_decay	start	-	3	29	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004591	Pkn2	ENSMUST00000166330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118506	1700094D03Rik	ENSMUST00000029551	ENSMUSP00000029551	TRANSLATION	protein_coding	-	CCDS50968.1	1	106	0	0	0.5	108.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000118506	1700094D03Rik	ENSMUST00000238911	ENSMUSP00000158884	TRANSLATION	protein_coding	-	-	-	101	0	0	5.8	108.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000027944	Hax1	ENSMUST00000199469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027944	Hax1	ENSMUST00000197432	ENSMUSP00000143136	TRANSLATION	protein_coding	start	-	2	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027944	Hax1	ENSMUST00000198889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027944	Hax1	ENSMUST00000079724	ENSMUSP00000078661	TRANSLATION	protein_coding	-	CCDS17519.1	1	280	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000027944	Hax1	ENSMUST00000199740	ENSMUSP00000143557	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027944	Hax1	ENSMUST00000199014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027944	Hax1	ENSMUST00000197767	ENSMUSP00000142445	TRANSLATION	protein_coding	-	-	5	277	0	0	1.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000027944	Hax1	ENSMUST00000197725	ENSMUSP00000142741	TRANSLATION	protein_coding	-	-	5	151	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000027944	Hax1	ENSMUST00000199163	ENSMUSP00000143663	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027944	Hax1	ENSMUST00000197786	ENSMUSP00000142627	TRANSLATION	protein_coding	-	CCDS79957.1	1	196	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000027944	Hax1	ENSMUST00000198782	ENSMUSP00000143155	TRANSLATION	protein_coding	-	CCDS79956.1	5	254	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000027944	Hax1	ENSMUST00000197481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042031	Lce3b	ENSMUST00000046234	ENSMUSP00000046325	TRANSLATION	protein_coding	-	CCDS38520.1	1	98	0	0	0.5	98.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000039167	Adgrl4	ENSMUST00000238194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039167	Adgrl4	ENSMUST00000141038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039167	Adgrl4	ENSMUST00000046977	ENSMUSP00000041939	TRANSLATION	protein_coding	-	CCDS17910.1	1	739	6	6.56	1.5	463.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039167	Adgrl4	ENSMUST00000196970	ENSMUSP00000143744	TRANSLATION	protein_coding	stop	-	3	181	6	1.7	0	38.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039167	Adgrl4	ENSMUST00000198893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039167	Adgrl4	ENSMUST00000238382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039167	Adgrl4	ENSMUST00000155652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039167	Adgrl4	ENSMUST00000238268	ENSMUSP00000158762	TRANSLATION	nonsense_mediated_decay	start	-	-	20	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039167	Adgrl4	ENSMUST00000129283	ENSMUSP00000158710	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015711	Prune1	ENSMUST00000148959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015711	Prune1	ENSMUST00000015855	ENSMUSP00000015855	TRANSLATION	protein_coding	-	CCDS17610.1	1	454	9	3.08	5.3	102.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028098	Rnf115	ENSMUST00000199974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028098	Rnf115	ENSMUST00000029740	ENSMUSP00000029740	TRANSLATION	protein_coding	-	CCDS17647.1	1	305	12	3.87	3.9	81.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028098	Rnf115	ENSMUST00000199051	ENSMUSP00000143321	TRANSLATION	nonsense_mediated_decay	-	-	1	77	4	1.35	0	31.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063730	Hsd3b2	ENSMUST00000107021	ENSMUSP00000102635	TRANSLATION	protein_coding	-	CCDS17667.1	1	373	30	1.54	5.1	372.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000063730	Hsd3b2	ENSMUST00000177651	ENSMUSP00000136533	TRANSLATION	protein_coding	-	CCDS17667.1	5	373	30	1.54	5.1	372.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000063730	Hsd3b2	ENSMUST00000107022	ENSMUSP00000102636	TRANSLATION	protein_coding	-	CCDS17667.1	1	373	30	1.54	5.1	372.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000027878	Notch2	ENSMUST00000198324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027878	Notch2	ENSMUST00000079812	ENSMUSP00000078741	TRANSLATION	protein_coding	-	CCDS51013.1	1	2473	16	17.58	5.1	1384.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000028180	Zranb2	ENSMUST00000029831	ENSMUSP00000029831	TRANSLATION	protein_coding	-	-	5	293	8	1.75	0	33.7	0	-4,-5	-	-	13.182	MINOR
ENSMUSG00000028180	Zranb2	ENSMUST00000198915	ENSMUSP00000143533	TRANSLATION	nonsense_mediated_decay	-	-	5	38	4	1	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028180	Zranb2	ENSMUST00000196900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028180	Zranb2	ENSMUST00000106058	ENSMUSP00000101673	TRANSLATION	protein_coding	-	CCDS51100.1	1	330	9	2.35	1.5	59.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028180	Zranb2	ENSMUST00000152882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028180	Zranb2	ENSMUST00000184802	ENSMUSP00000138986	TRANSLATION	nonsense_mediated_decay	-	-	1	40	4	1	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028180	Zranb2	ENSMUST00000106063	ENSMUSP00000101678	TRANSLATION	protein_coding	start	-	5	208	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028180	Zranb2	ENSMUST00000106057	ENSMUSP00000101672	TRANSLATION	protein_coding	-	-	5	320	9	2.35	1.5	59.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032826	Ank2	ENSMUST00000182316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182571	ENSMUSP00000138747	TRANSLATION	protein_coding	start	-	5	421	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000183075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182610	ENSMUSP00000138231	TRANSLATION	protein_coding	-	-	1	418	0	9.146	0	281.9	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000211813	ENSMUSP00000148296	TRANSLATION	protein_coding	start/stop	-	5	121	0	1	0	63.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182994	ENSMUSP00000138089	TRANSLATION	protein_coding	-	-	1	454	0	9.08	0	281.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000239234	ENSMUSP00000159256	TRANSLATION	protein_coding	stop	-	-	53	0	1.15	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182008	ENSMUSP00000138730	TRANSLATION	protein_coding	-	-	1	481	0	11.176	0	284.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182711	ENSMUSP00000138781	TRANSLATION	protein_coding	stop	-	1	1219	0	26.56	0	647.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182959	ENSMUSP00000138251	TRANSLATION	protein_coding	stop	-	5	1114	0	24.876	0	647.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182547	ENSMUSP00000138602	TRANSLATION	protein_coding	-	-	1	489	0	11.506	0	305.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000183234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000238781	ENSMUSP00000158721	TRANSLATION	protein_coding	stop	-	-	112	0	2	0	30	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182118	ENSMUSP00000138323	TRANSLATION	protein_coding	start/stop	-	5	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182062	ENSMUSP00000138279	TRANSLATION	protein_coding	start/stop	-	3	187	0	4.41	0	47.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182064	ENSMUSP00000138620	TRANSLATION	protein_coding	-	-	5	3926	0	35.81	0	727.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032826	Ank2	ENSMUST00000044443	ENSMUSP00000043765	TRANSLATION	protein_coding	-	CCDS38625.1	1	1050	0	14.65	0.5	198	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000104965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182078	ENSMUSP00000138753	TRANSLATION	protein_coding	-	CCDS84672.1	5	3900	0	34.296	0.5	667.3	0	-4,-7	-	-	5.334	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000183095	ENSMUSP00000138487	TRANSLATION	protein_coding	stop	-	5	90	0	1.566	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000189368	ENSMUSP00000140700	TRANSLATION	protein_coding	start/stop	-	-	113	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000183097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032826	Ank2	ENSMUST00000182025	ENSMUSP00000138157	TRANSLATION	nonsense_mediated_decay	start	-	5	108	0	2.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032826	Ank2	ENSMUST00000182452	ENSMUSP00000138373	TRANSLATION	protein_coding	stop	-	5	124	0	2.93	0	94.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027954	Efna1	ENSMUST00000029566	ENSMUSP00000029566	TRANSLATION	protein_coding	-	CCDS17501.1	1	205	0	4.25	1.5	146.4	2	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027954	Efna1	ENSMUST00000118860	ENSMUSP00000113098	TRANSLATION	protein_coding	-	-	5	183	0	3.5	0	143.3	2	1,-2	-	-	10.314	MINOR
ENSMUSG00000027954	Efna1	ENSMUST00000118587	ENSMUSP00000112904	TRANSLATION	protein_coding	-	CCDS50961.1	1	142	0	2.25	1.5	76.8	2	-4,-5	-	-	3.822	MINOR
ENSMUSG00000036334	Igsf10	ENSMUST00000193455	ENSMUSP00000141971	TRANSLATION	protein_coding	-	CCDS50915.1	5	2594	0	3.56	0.5	587	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036334	Igsf10	ENSMUST00000039419	ENSMUSP00000037246	TRANSLATION	protein_coding	-	CCDS50915.1	5	2594	0	3.56	0.5	587	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036334	Igsf10	ENSMUST00000194546	ENSMUSP00000141391	TRANSLATION	protein_coding	-	CCDS50915.1	5	2594	0	3.56	0.5	587	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036334	Igsf10	ENSMUST00000195983	ENSMUSP00000143071	TRANSLATION	protein_coding	stop	-	3	76	0	0.864	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000040289	Hey1	ENSMUST00000194299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040289	Hey1	ENSMUST00000042412	ENSMUSP00000038014	TRANSLATION	protein_coding	-	CCDS17232.1	1	299	0	2.265	0.5	104.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040289	Hey1	ENSMUST00000192102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040289	Hey1	ENSMUST00000192550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049565	Aknad1	ENSMUST00000150998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049565	Aknad1	ENSMUST00000133931	ENSMUSP00000121755	TRANSLATION	protein_coding	-	CCDS51049.1	1	675	0	0	0.5	108.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049565	Aknad1	ENSMUST00000147916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049565	Aknad1	ENSMUST00000123556	ENSMUSP00000125068	TRANSLATION	nonsense_mediated_decay	-	-	2	414	0	0	0.5	107.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104301	Wdr49	ENSMUST00000193989	ENSMUSP00000144721	TRANSLATION	protein_coding	-	-	5	710	0	4.94	1.5	38.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000104301	Wdr49	ENSMUST00000203169	ENSMUSP00000144789	TRANSLATION	protein_coding	stop	-	5	511	5	1.82	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000104301	Wdr49	ENSMUST00000204341	ENSMUSP00000145379	TRANSLATION	protein_coding	start/stop	-	5	448	5	1.82	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104301	Wdr49	ENSMUST00000204982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027534	Snx16	ENSMUST00000195822	ENSMUSP00000141230	TRANSLATION	protein_coding	-	-	1	202	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027534	Snx16	ENSMUST00000029047	ENSMUSP00000029047	TRANSLATION	protein_coding	-	CCDS17244.1	1	344	0	2.05	1.5	70.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000027534	Snx16	ENSMUST00000099223	ENSMUSP00000096828	TRANSLATION	protein_coding	-	CCDS50862.1	1	304	0	2.05	1.5	70.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028099	Polr3c	ENSMUST00000141377	ENSMUSP00000115300	TRANSLATION	protein_coding	-	-	1	202	0	3.33	0	84.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000028099	Polr3c	ENSMUST00000137009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028099	Polr3c	ENSMUST00000125183	ENSMUSP00000123513	TRANSLATION	protein_coding	-	-	1	139	0	2.33	0	84.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000028099	Polr3c	ENSMUST00000029741	ENSMUSP00000029741	TRANSLATION	protein_coding	-	CCDS51010.1	1	533	0	12.26	8.8	232	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028099	Polr3c	ENSMUST00000128918	ENSMUSP00000119236	TRANSLATION	nonsense_mediated_decay	start	-	3	193	0	4.155	0	97.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028099	Polr3c	ENSMUST00000154679	ENSMUSP00000122435	TRANSLATION	protein_coding	-	CCDS51010.1	5	533	0	12.26	8.8	232	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000063954	H2ac19	ENSMUST00000074976	ENSMUSP00000100581	TRANSLATION	protein_coding	-	CCDS57241.1	-	130	0	1	8.8	135.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000036832	Lpar3	ENSMUST00000039164	ENSMUSP00000037712	TRANSLATION	protein_coding	-	CCDS17901.1	1	354	0	1.6	9.5	125	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028008	Asic5	ENSMUST00000142889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028008	Asic5	ENSMUST00000107736	ENSMUSP00000103364	TRANSLATION	protein_coding	-	-	1	453	0	5.46	0.5	348.6	1	-4,-7	-	-	11.592	ALTERNATIVE:2
ENSMUSG00000028008	Asic5	ENSMUST00000029641	ENSMUSP00000029641	TRANSLATION	protein_coding	-	CCDS17428.1	1	495	0	5.61	1.5	350.4	1	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027997	Casp6	ENSMUST00000197175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027997	Casp6	ENSMUST00000029626	ENSMUSP00000029626	TRANSLATION	protein_coding	-	CCDS17838.1	1	276	4	4.981	2.7	169	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027997	Casp6	ENSMUST00000137314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027997	Casp6	ENSMUST00000152622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045576	St7l	ENSMUST00000059271	ENSMUSP00000058455	TRANSLATION	protein_coding	-	CCDS17705.1	1	559	0	0	1.5	962.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045576	St7l	ENSMUST00000197098	ENSMUSP00000142843	TRANSLATION	protein_coding	start/stop	-	5	241	0	0	0	314.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045576	St7l	ENSMUST00000199335	ENSMUSP00000143583	TRANSLATION	nonsense_mediated_decay	start	-	5	28	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045576	St7l	ENSMUST00000183914	ENSMUSP00000139266	TRANSLATION	nonsense_mediated_decay	-	-	5	121	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000045576	St7l	ENSMUST00000123876	ENSMUSP00000138577	TRANSLATION	protein_coding	stop	-	3	282	0	0	0	292.9	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000045576	St7l	ENSMUST00000106769	ENSMUSP00000102380	TRANSLATION	protein_coding	-	CCDS57250.1	1	527	0	0	0.5	666	5	-4,-6	-	-	0	MINOR
ENSMUSG00000045576	St7l	ENSMUST00000140457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045576	St7l	ENSMUST00000126775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045576	St7l	ENSMUST00000199186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045576	St7l	ENSMUST00000146237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045576	St7l	ENSMUST00000200132	ENSMUSP00000143759	TRANSLATION	protein_coding	-	CCDS79994.1	1	481	0	0	0.5	815.3	5	-4,-6	-	-	0	MINOR
ENSMUSG00000005493	Msh4	ENSMUST00000191083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005493	Msh4	ENSMUST00000005630	ENSMUSP00000005630	TRANSLATION	protein_coding	-	CCDS38678.1	1	958	12	9.02	0.5	487.7	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000005493	Msh4	ENSMUST00000191606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005493	Msh4	ENSMUST00000186220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005493	Msh4	ENSMUST00000190449	ENSMUSP00000140265	TRANSLATION	protein_coding	-	CCDS80067.1	1	764	12	8.84	1.5	475.4	0	-4,-5	-	-	16.902	ALTERNATIVE:2
ENSMUSG00000005493	Msh4	ENSMUST00000191504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005493	Msh4	ENSMUST00000189189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005493	Msh4	ENSMUST00000188338	ENSMUSP00000140190	TRANSLATION	protein_coding	-	-	2	870	12	9.02	0	487.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000036432	Siah2	ENSMUST00000145032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036432	Siah2	ENSMUST00000070368	ENSMUSP00000067496	TRANSLATION	protein_coding	-	CCDS17368.1	1	325	16	1	1.5	288.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000049796	Crh	ENSMUST00000061294	ENSMUSP00000061185	TRANSLATION	protein_coding	-	CCDS17258.1	1	187	0	0.6	1.5	59.4	0	2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000093769	H3c14	ENSMUST00000177796	ENSMUSP00000151536	TRANSLATION	protein_coding	-	-	-	181	0	1	0	181.6	0	-4,-2	-	-	12	MINOR
ENSMUSG00000093769	H3c14	ENSMUST00000176059	ENSMUSP00000134751	TRANSLATION	protein_coding	-	CCDS38554.2	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000062232	Rapgef2	ENSMUST00000118100	ENSMUSP00000114119	TRANSLATION	protein_coding	-	-	1	1496	0	7.4	2.7	303.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000062232	Rapgef2	ENSMUST00000124647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062232	Rapgef2	ENSMUST00000118340	ENSMUSP00000113778	TRANSLATION	protein_coding	-	CCDS50932.1	1	1494	0	7.4	1.5	303.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000062232	Rapgef2	ENSMUST00000136126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062232	Rapgef2	ENSMUST00000152275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062232	Rapgef2	ENSMUST00000195708	ENSMUSP00000141542	TRANSLATION	protein_coding	-	-	5	1644	0	7.4	0	303.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000009108	Gnat2	ENSMUST00000151326	ENSMUSP00000120425	TRANSLATION	protein_coding	stop	-	2	232	17	6	0	257.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009108	Gnat2	ENSMUST00000130013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009108	Gnat2	ENSMUST00000131856	ENSMUSP00000121533	TRANSLATION	protein_coding	stop	-	5	249	10	4.365	0	209.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009108	Gnat2	ENSMUST00000145101	ENSMUSP00000123125	TRANSLATION	protein_coding	stop	-	3	112	7	2.83	0	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009108	Gnat2	ENSMUST00000142568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009108	Gnat2	ENSMUST00000058669	ENSMUSP00000053818	TRANSLATION	protein_coding	-	CCDS17750.1	1	354	24	8	17	413.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038486	Sv2a	ENSMUST00000196912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038486	Sv2a	ENSMUST00000133665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038486	Sv2a	ENSMUST00000035371	ENSMUSP00000037576	TRANSLATION	protein_coding	-	CCDS17631.1	1	742	0	5.34	7.6	141	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037643	Prkci	ENSMUST00000123971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037643	Prkci	ENSMUST00000130238	ENSMUSP00000123671	TRANSLATION	protein_coding	stop	-	5	183	9	4	0	101.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037643	Prkci	ENSMUST00000108249	ENSMUSP00000103884	TRANSLATION	protein_coding	-	CCDS17289.2	1	595	27	13.55	6.3	363.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000037643	Prkci	ENSMUST00000136086	ENSMUSP00000119192	TRANSLATION	protein_coding	start	-	3	118	11	2.75	0	108.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037643	Prkci	ENSMUST00000130706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102805	Gm37240	ENSMUST00000146862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102805	Gm37240	ENSMUST00000154148	ENSMUSP00000116393	TRANSLATION	protein_coding,RT	-	-	1	252	0	4	2.9	269.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000102805	Gm37240	ENSMUST00000125216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036362	P2ry13	ENSMUST00000040622	ENSMUSP00000044730	TRANSLATION	protein_coding	-	CCDS17372.1	1	337	0	0.6	1.5	96.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037994	Slc9b2	ENSMUST00000051849	ENSMUSP00000060640	TRANSLATION	protein_coding	-	CCDS17854.1	1	547	0	0	1.5	103.1	12	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037994	Slc9b2	ENSMUST00000132405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037994	Slc9b2	ENSMUST00000149655	ENSMUSP00000142939	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037994	Slc9b2	ENSMUST00000126034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037994	Slc9b2	ENSMUST00000145195	ENSMUSP00000123083	TRANSLATION	nonsense_mediated_decay	-	-	1	143	0	0	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000027858	Tspan2	ENSMUST00000196611	ENSMUSP00000142964	TRANSLATION	protein_coding	-	-	5	153	0	3.345	0	102.8	1	-3,-5	-	-	6.348	MINOR
ENSMUSG00000027858	Tspan2	ENSMUST00000029451	ENSMUSP00000029451	TRANSLATION	protein_coding	-	CCDS17688.1	1	221	0	4.905	7.5	145	3	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027858	Tspan2	ENSMUST00000197345	ENSMUSP00000142543	TRANSLATION	protein_coding	start	-	3	87	0	1.095	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027858	Tspan2	ENSMUST00000119902	ENSMUSP00000113803	TRANSLATION	protein_coding	-	CCDS57249.1	1	217	0	4.155	0.5	123.6	2	-4,-1	-	-	9.216	MINOR
ENSMUSG00000028060	Khdc4	ENSMUST00000197300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028060	Khdc4	ENSMUST00000198721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028060	Khdc4	ENSMUST00000029696	ENSMUSP00000029696	TRANSLATION	protein_coding	-	CCDS17483.1	1	612	0	2.5	1.8	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028060	Khdc4	ENSMUST00000200364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028060	Khdc4	ENSMUST00000198042	ENSMUSP00000142773	TRANSLATION	nonsense_mediated_decay	-	-	5	487	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028060	Khdc4	ENSMUST00000200622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028060	Khdc4	ENSMUST00000198078	ENSMUSP00000142760	TRANSLATION	nonsense_mediated_decay	-	-	5	432	3	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028060	Khdc4	ENSMUST00000199684	ENSMUSP00000142353	TRANSLATION	nonsense_mediated_decay	-	-	2	487	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028060	Khdc4	ENSMUST00000200438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028060	Khdc4	ENSMUST00000200588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028005	Gucy1b1	ENSMUST00000192508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028005	Gucy1b1	ENSMUST00000029635	ENSMUSP00000029635	TRANSLATION	protein_coding	-	CCDS38460.1	1	620	20	9.88	12.8	600.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028005	Gucy1b1	ENSMUST00000193597	ENSMUSP00000142119	TRANSLATION	protein_coding	-	CCDS79928.1	1	609	20	8.55	0.5	579	0	-4,-5	-	-	14.052	MINOR
ENSMUSG00000028005	Gucy1b1	ENSMUST00000193085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053769	Lysmd1	ENSMUST00000066386	ENSMUSP00000067811	TRANSLATION	protein_coding	-	CCDS17602.1	1	226	0	1.6	6.3	34	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000049230	Gm9833	ENSMUST00000061419	ENSMUSP00000058811	TRANSLATION	protein_coding	-	-	1	498	0	0.4	0	142.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039234	Sec24d	ENSMUST00000198210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039234	Sec24d	ENSMUST00000200309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039234	Sec24d	ENSMUST00000196631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039234	Sec24d	ENSMUST00000197291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039234	Sec24d	ENSMUST00000200333	ENSMUSP00000143588	TRANSLATION	protein_coding	-	-	1	47	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039234	Sec24d	ENSMUST00000047923	ENSMUSP00000035823	TRANSLATION	protein_coding	-	CCDS38621.1	1	1032	4	17	3.9	525.1	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000039234	Sec24d	ENSMUST00000196482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039234	Sec24d	ENSMUST00000196167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063600	Egfem1	ENSMUST00000124809	ENSMUSP00000114314	TRANSLATION	protein_coding	stop	-	3	125	0	0	0	52.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063600	Egfem1	ENSMUST00000146943	ENSMUSP00000118156	TRANSLATION	protein_coding	stop	-	5	176	7	1.93	0	74	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063600	Egfem1	ENSMUST00000119598	ENSMUSP00000112943	TRANSLATION	protein_coding	-	CCDS50881.1	1	590	17	6.84	0.5	193.9	0	1,-2	-	-	16.002	PRINCIPAL:4
ENSMUSG00000063600	Egfem1	ENSMUST00000140288	ENSMUSP00000117016	TRANSLATION	protein_coding	start/stop	-	3	244	11	2.8	0	77.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063600	Egfem1	ENSMUST00000126420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063600	Egfem1	ENSMUST00000143483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063600	Egfem1	ENSMUST00000118531	ENSMUSP00000112907	TRANSLATION	protein_coding	-	CCDS50882.1	1	533	20	6.17	0.5	176.3	0	1,-2	-	-	15.606	ALTERNATIVE:2
ENSMUSG00000027973	1700006A11Rik	ENSMUST00000198630	ENSMUSP00000143323	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027973	1700006A11Rik	ENSMUST00000029598	ENSMUSP00000029598	TRANSLATION	protein_coding	-	CCDS51064.1	1	544	0	5.72	0.5	232.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000105504	Gbp5	ENSMUST00000196255	ENSMUSP00000143336	TRANSLATION	nonsense_mediated_decay	-	-	5	724	18	9.56	0	714.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000105504	Gbp5	ENSMUST00000199578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000105504	Gbp5	ENSMUST00000197459	ENSMUSP00000142938	TRANSLATION	nonsense_mediated_decay	-	-	1	612	13	6.56	0	518.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000105504	Gbp5	ENSMUST00000198803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105504	Gbp5	ENSMUST00000090127	ENSMUSP00000087587	TRANSLATION	protein_coding	-	CCDS17877.1	1	590	18	9.98	1.5	722.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027751	Supt20	ENSMUST00000199655	ENSMUSP00000143520	TRANSLATION	protein_coding	stop	-	5	141	0	0	0	52.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000199652	ENSMUSP00000142648	TRANSLATION	protein_coding	stop	-	5	181	0	0	0	75.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000199674	ENSMUSP00000142948	TRANSLATION	nonsense_mediated_decay	-	-	5	529	0	0	0.5	131.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000197568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027751	Supt20	ENSMUST00000170552	ENSMUSP00000131454	TRANSLATION	protein_coding	-	CCDS38431.1	1	531	0	0	0.5	127.9	0	-4,-5	-	-	5.808	PRINCIPAL:2
ENSMUSG00000027751	Supt20	ENSMUST00000197502	ENSMUSP00000143750	TRANSLATION	protein_coding	-	-	5	784	0	0	0.5	130.2	0	-4,-5	-	-	5.946	ALTERNATIVE:2
ENSMUSG00000027751	Supt20	ENSMUST00000029315	ENSMUSP00000029315	TRANSLATION	protein_coding	-	-	1	263	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000200450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027751	Supt20	ENSMUST00000200441	ENSMUSP00000143231	TRANSLATION	protein_coding	-	-	5	275	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000200439	ENSMUSP00000143059	TRANSLATION	nonsense_mediated_decay	-	-	1	530	0	0	0.5	131.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027751	Supt20	ENSMUST00000198745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027751	Supt20	ENSMUST00000200024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028044	Cks1b	ENSMUST00000029679	ENSMUSP00000029679	TRANSLATION	protein_coding	-	CCDS38493.1	1	79	0	2.5	21.5	131.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028044	Cks1b	ENSMUST00000183484	ENSMUSP00000138900	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0.79	0	25.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028044	Cks1b	ENSMUST00000107422	ENSMUSP00000103045	TRANSLATION	protein_coding	-	-	2	57	0	1.75	0	90	0	-4,-5	-	-	7.716	MINOR
ENSMUSG00000042390	Gatad2b	ENSMUST00000205797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042390	Gatad2b	ENSMUST00000199754	ENSMUSP00000142514	TRANSLATION	protein_coding	-	CCDS17526.1	5	594	5	1	10.8	102.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042390	Gatad2b	ENSMUST00000196212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042390	Gatad2b	ENSMUST00000199607	ENSMUSP00000142617	TRANSLATION	protein_coding	-	CCDS17526.1	5	594	5	1	10.8	102.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042390	Gatad2b	ENSMUST00000049382	ENSMUSP00000041370	TRANSLATION	protein_coding	-	CCDS17526.1	1	594	5	1	10.8	102.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042390	Gatad2b	ENSMUST00000197988	ENSMUSP00000143085	TRANSLATION	protein_coding	-	-	1	578	5	1	0	102.3	0	-4,-5	-	-	17	MINOR
ENSMUSG00000042390	Gatad2b	ENSMUST00000200373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042390	Gatad2b	ENSMUST00000206907	ENSMUSP00000145623	TRANSLATION	protein_coding	start/stop	-	5	263	5	0	0	38	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027902	Chil6	ENSMUST00000029510	ENSMUSP00000029510	TRANSLATION	protein_coding	-	CCDS17720.1	1	440	1	8.214	1.5	276	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039286	Fndc3b	ENSMUST00000046157	ENSMUSP00000041495	TRANSLATION	protein_coding	-	CCDS17274.1	1	1207	0	13.9	1.5	234.9	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039286	Fndc3b	ENSMUST00000195008	ENSMUSP00000141620	TRANSLATION	protein_coding	-	CCDS17274.1	1	1207	0	13.9	1.5	234.9	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039286	Fndc3b	ENSMUST00000193779	ENSMUSP00000141888	TRANSLATION	protein_coding	stop	-	2	119	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039286	Fndc3b	ENSMUST00000191684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014603	Alx3	ENSMUST00000014747	ENSMUSP00000014747	TRANSLATION	protein_coding	-	CCDS17739.1	1	343	0	2	6.3	84	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000014603	Alx3	ENSMUST00000233202	ENSMUSP00000156514	TRANSLATION	protein_coding	stop	-	-	131	0	2	0	84	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015850	Adamtsl4	ENSMUST00000124410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015850	Adamtsl4	ENSMUST00000015994	ENSMUSP00000015994	TRANSLATION	protein_coding	-	CCDS17618.1	1	1036	3	2.42	0.5	258.6	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000015850	Adamtsl4	ENSMUST00000117782	ENSMUSP00000113424	TRANSLATION	protein_coding	-	CCDS17618.1	1	1036	3	2.42	0.5	258.6	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000015850	Adamtsl4	ENSMUST00000151054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015850	Adamtsl4	ENSMUST00000148854	ENSMUSP00000120844	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000074195	Clca4b	ENSMUST00000098549	ENSMUSP00000096149	TRANSLATION	protein_coding	-	CCDS38660.1	1	925	5	0	1.5	521.2	0	2,-3	-	-	11	PRINCIPAL:1
ENSMUSG00000027863	Cd2	ENSMUST00000029456	ENSMUSP00000029456	TRANSLATION	protein_coding	-	CCDS17681.1	1	344	0	2	1.5	91.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000027863	Cd2	ENSMUST00000156103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027863	Cd2	ENSMUST00000152321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052468	Pmp2	ENSMUST00000029034	ENSMUSP00000029034	TRANSLATION	protein_coding	-	CCDS17236.1	1	132	19	3.25	17	81.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027940	Tpm3	ENSMUST00000149115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000118566	ENSMUSP00000113056	TRANSLATION	protein_coding	-	-	5	248	0	5.91	17.5	325.2	0	-4,-5	-	-	11.434	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000149734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000127955	ENSMUSP00000115565	TRANSLATION	protein_coding	stop	-	3	9	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000119570	ENSMUSP00000113978	TRANSLATION	protein_coding	-	CCDS38499.2	1	285	0	7.83	15	294.7	0	-4,-5	-	-	12.904	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000029549	ENSMUSP00000029549	TRANSLATION	protein_coding	-	CCDS57223.1	1	248	0	5.83	13	291.8	0	-4,-5	-	-	8.302	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000133361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000149432	ENSMUSP00000114229	TRANSLATION	protein_coding	stop	-	3	71	0	2.16	0	99.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000131354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000136125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027940	Tpm3	ENSMUST00000143281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000151798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000133281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000119158	ENSMUSP00000113219	TRANSLATION	protein_coding	-	CCDS79961.1	3	247	0	5.61	15.3	305.4	0	-4,-5	-	-	9.17	MINOR
ENSMUSG00000027940	Tpm3	ENSMUST00000147430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027940	Tpm3	ENSMUST00000121503	ENSMUSP00000113578	TRANSLATION	protein_coding	-	-	1	284	0	7.91	19.5	327.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037531	Mrpl47	ENSMUST00000192021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037531	Mrpl47	ENSMUST00000043966	ENSMUSP00000048078	TRANSLATION	protein_coding	-	CCDS17299.1	1	252	0	6.75	3.9	127.3	0	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000037531	Mrpl47	ENSMUST00000153564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047940	Stpg2	ENSMUST00000062306	ENSMUSP00000051539	TRANSLATION	protein_coding	-	CCDS17871.1	1	561	0	0	0.5	38.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047940	Stpg2	ENSMUST00000106239	ENSMUSP00000101846	TRANSLATION	protein_coding	-	-	5	561	0	0	0.5	38.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027708	Dcun1d1	ENSMUST00000200661	ENSMUSP00000143716	TRANSLATION	protein_coding	stop	-	3	220	3	5.51	0	126.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000196270	ENSMUSP00000142384	TRANSLATION	protein_coding	stop	-	2	115	0	2.43	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000196261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027708	Dcun1d1	ENSMUST00000178098	ENSMUSP00000137324	TRANSLATION	protein_coding	-	CCDS17306.1	5	244	3	6.26	17.5	156.4	0	-4,-5	-	-	17.86	PRINCIPAL:3
ENSMUSG00000027708	Dcun1d1	ENSMUST00000198362	ENSMUSP00000143252	TRANSLATION	protein_coding	stop	-	3	20	3	0.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000197489	ENSMUSP00000142690	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	1.26	0	41.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000196174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027708	Dcun1d1	ENSMUST00000197546	ENSMUSP00000142421	TRANSLATION	nonsense_mediated_decay	start	-	3	142	0	2.43	0	41.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000196115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027708	Dcun1d1	ENSMUST00000199173	ENSMUSP00000142443	TRANSLATION	protein_coding	stop	-	3	114	0	2.43	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000148465	ENSMUSP00000115420	TRANSLATION	protein_coding	stop	-	2	214	3	5.51	0	115.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027708	Dcun1d1	ENSMUST00000198389	ENSMUSP00000143243	TRANSLATION	protein_coding	-	CCDS17306.1	1	244	3	6.26	17.5	156.4	0	-4,-5	-	-	17.86	PRINCIPAL:3
ENSMUSG00000027708	Dcun1d1	ENSMUST00000108182	ENSMUSP00000103817	TRANSLATION	protein_coding	-	CCDS57207.1	1	259	3	6.42	16.3	170.1	0	-4,-7	-	-	18.708	ALTERNATIVE:1
ENSMUSG00000027708	Dcun1d1	ENSMUST00000196263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027770	Dhx36	ENSMUST00000192223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027770	Dhx36	ENSMUST00000160858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027770	Dhx36	ENSMUST00000162070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027770	Dhx36	ENSMUST00000029336	ENSMUSP00000029336	TRANSLATION	protein_coding	-	CCDS17379.1	1	1001	12	14.515	0.5	240.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090919	Pabpc4l	ENSMUST00000195436	ENSMUSP00000141684	TRANSLATION	protein_coding	stop	-	2	172	0	2	0	136.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090919	Pabpc4l	ENSMUST00000195537	ENSMUSP00000141854	TRANSLATION	protein_coding	stop	-	3	50	0	1	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090919	Pabpc4l	ENSMUST00000166505	ENSMUSP00000126224	TRANSLATION	protein_coding	-	CCDS50904.1	2	370	0	2.6	2.7	279	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090919	Pabpc4l	ENSMUST00000192793	ENSMUSP00000141300	TRANSLATION	protein_coding	-	CCDS50904.1	3	370	0	2.6	2.7	279	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015748	Prpf3	ENSMUST00000161476	ENSMUSP00000124950	TRANSLATION	protein_coding	-	CCDS17621.1	1	683	0	14.08	11	483.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000015748	Prpf3	ENSMUST00000161482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015748	Prpf3	ENSMUST00000160155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015748	Prpf3	ENSMUST00000160109	ENSMUSP00000124302	TRANSLATION	nonsense_mediated_decay	-	-	3	101	0	2.066	0	54.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015748	Prpf3	ENSMUST00000161420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015748	Prpf3	ENSMUST00000163059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015748	Prpf3	ENSMUST00000159901	ENSMUSP00000124444	TRANSLATION	protein_coding	start	-	3	114	0	1.75	0	62.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015748	Prpf3	ENSMUST00000161073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015748	Prpf3	ENSMUST00000015892	ENSMUSP00000015892	TRANSLATION	protein_coding	-	CCDS17621.1	1	683	0	14.08	11	483.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051278	Zgrf1	ENSMUST00000196141	ENSMUSP00000143761	TRANSLATION	protein_coding	-	CCDS51066.1	5	1863	12	5.9	0.5	389.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051278	Zgrf1	ENSMUST00000043108	ENSMUSP00000044432	TRANSLATION	protein_coding	-	CCDS51066.1	5	1863	12	5.9	0.5	389.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051278	Zgrf1	ENSMUST00000199888	ENSMUSP00000142693	TRANSLATION	nonsense_mediated_decay	-	-	1	785	0	0	0	71.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051278	Zgrf1	ENSMUST00000196341	ENSMUSP00000143570	TRANSLATION	nonsense_mediated_decay	start	-	5	662	9	1.82	0	83.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051278	Zgrf1	ENSMUST00000195955	ENSMUSP00000142886	TRANSLATION	protein_coding	-	-	2	856	0	0	0	71.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000051278	Zgrf1	ENSMUST00000200490	ENSMUSP00000143585	TRANSLATION	nonsense_mediated_decay	-	-	1	785	0	0	0	71.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051278	Zgrf1	ENSMUST00000197108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028133	Rwdd3	ENSMUST00000164968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028133	Rwdd3	ENSMUST00000106465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028133	Rwdd3	ENSMUST00000106467	ENSMUSP00000102075	TRANSLATION	protein_coding	-	CCDS17799.2	1	339	0	2.35	0.5	38.8	0	-4,-5	-	-	10.878	MINOR
ENSMUSG00000028133	Rwdd3	ENSMUST00000039761	ENSMUSP00000040826	TRANSLATION	protein_coding	-	CCDS17798.1	1	267	0	2.35	5.1	47.7	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000028133	Rwdd3	ENSMUST00000098650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028133	Rwdd3	ENSMUST00000164925	ENSMUSP00000133036	TRANSLATION	protein_coding	stop	-	1	140	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028133	Rwdd3	ENSMUST00000164573	ENSMUSP00000130734	TRANSLATION	protein_coding	start	-	3	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028133	Rwdd3	ENSMUST00000170781	ENSMUSP00000129262	TRANSLATION	protein_coding	-	-	5	200	0	2.35	5.1	47.7	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028133	Rwdd3	ENSMUST00000106466	ENSMUSP00000102074	TRANSLATION	protein_coding	-	CCDS17798.1	1	267	0	2.35	5.1	47.7	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000036381	P2ry14	ENSMUST00000197841	ENSMUSP00000142934	TRANSLATION	protein_coding	-	CCDS79913.1	5	347	0	1.798	0.5	120.8	8	-4,-6	-	-	12	MINOR
ENSMUSG00000036381	P2ry14	ENSMUST00000196081	ENSMUSP00000142601	TRANSLATION	protein_coding	-	CCDS17371.1	1	338	0	1.6	7.5	120.8	8	-4,-7	-	-	14.34	PRINCIPAL:1
ENSMUSG00000036381	P2ry14	ENSMUST00000065220	ENSMUSP00000066669	TRANSLATION	protein_coding	-	CCDS17371.1	1	338	0	1.6	7.5	120.8	8	-4,-7	-	-	14.34	PRINCIPAL:1
ENSMUSG00000036381	P2ry14	ENSMUST00000198838	ENSMUSP00000143499	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036381	P2ry14	ENSMUST00000200673	ENSMUSP00000142718	TRANSLATION	protein_coding	stop	-	2	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036381	P2ry14	ENSMUST00000197220	ENSMUSP00000143070	TRANSLATION	protein_coding	-	CCDS17371.1	1	338	0	1.6	7.5	120.8	8	-4,-7	-	-	14.34	PRINCIPAL:1
ENSMUSG00000036381	P2ry14	ENSMUST00000200358	ENSMUSP00000142641	TRANSLATION	protein_coding	stop	-	2	110	0	1	0	27.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000036381	P2ry14	ENSMUST00000196716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036381	P2ry14	ENSMUST00000091112	ENSMUSP00000088642	TRANSLATION	protein_coding	-	CCDS17371.1	1	338	0	1.6	7.5	120.8	8	-4,-7	-	-	14.34	PRINCIPAL:1
ENSMUSG00000078173	Lenep	ENSMUST00000057431	ENSMUSP00000052968	TRANSLATION	protein_coding	-	CCDS38491.1	-	61	0	0	6.3	119.9	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000094613	A630076J17Rik	ENSMUST00000179399	ENSMUSP00000137603	TRANSLATION	protein_coding	-	CCDS57252.1	1	107	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028158	Mttp	ENSMUST00000029805	ENSMUSP00000029805	TRANSLATION	protein_coding	-	CCDS38650.1	1	894	0	0	6.3	238.2	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000028158	Mttp	ENSMUST00000098580	ENSMUSP00000096179	TRANSLATION	protein_coding	-	CCDS51080.1	5	909	0	0	0.5	238.2	0	0,-3	-	-	6	MINOR
ENSMUSG00000028158	Mttp	ENSMUST00000197680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027843	Ptpn22	ENSMUST00000146071	ENSMUSP00000122307	TRANSLATION	nonsense_mediated_decay	-	-	1	715	12	8.75	0	259.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027843	Ptpn22	ENSMUST00000198701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027843	Ptpn22	ENSMUST00000029433	ENSMUSP00000029433	TRANSLATION	protein_coding	-	CCDS38577.1	1	802	12	8.75	0.5	259.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027843	Ptpn22	ENSMUST00000134373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027843	Ptpn22	ENSMUST00000197997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027843	Ptpn22	ENSMUST00000196385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027843	Ptpn22	ENSMUST00000126548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027843	Ptpn22	ENSMUST00000198530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028071	Sh2d2a	ENSMUST00000029709	ENSMUSP00000029709	TRANSLATION	protein_coding	-	CCDS17455.1	1	366	0	2.14	0.5	56.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028071	Sh2d2a	ENSMUST00000107581	ENSMUSP00000103207	TRANSLATION	protein_coding	-	CCDS38476.1	1	374	0	2.14	1.5	56.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028071	Sh2d2a	ENSMUST00000194639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027555	Car13	ENSMUST00000029071	ENSMUSP00000029071	TRANSLATION	protein_coding	-	CCDS17247.1	1	262	6	6.25	14.8	314.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027828	Ssr3	ENSMUST00000119896	ENSMUSP00000113831	TRANSLATION	protein_coding	-	-	1	179	0	0	0	253.2	3	-4,-7	-	-	4.392	MINOR
ENSMUSG00000027828	Ssr3	ENSMUST00000139785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027828	Ssr3	ENSMUST00000029414	ENSMUSP00000029414	TRANSLATION	protein_coding	-	CCDS17386.1	1	185	0	0	19.5	280	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000048332	Lhfp	ENSMUST00000137954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048332	Lhfp	ENSMUST00000059562	ENSMUSP00000056364	TRANSLATION	protein_coding	-	CCDS17344.1	1	200	0	0	15.5	200.6	2	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000048332	Lhfp	ENSMUST00000196913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048332	Lhfp	ENSMUST00000147139	ENSMUSP00000119019	TRANSLATION	protein_coding	-	CCDS17344.1	5	200	0	0	15.5	200.6	2	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000059857	Ntng1	ENSMUST00000138344	ENSMUSP00000120688	TRANSLATION	protein_coding	-	CCDS59652.1	1	483	6	5.13	5.2	247.7	0	1,-3	-	-	16.742	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000051253	ENSMUSP00000052268	TRANSLATION	protein_coding	start	-	-	108	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000191116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059857	Ntng1	ENSMUST00000106570	ENSMUSP00000102180	TRANSLATION	protein_coding	-	-	5	461	6	4.414	6.4	218.1	0	1,-3	-	-	13.982	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000128219	ENSMUSP00000116579	TRANSLATION	nonsense_mediated_decay	-	-	1	304	6	2.066	0	188.4	0	1,-3	-	-	-1	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000106575	ENSMUSP00000102185	TRANSLATION	protein_coding	-	-	5	539	6	5.426	6.4	275.9	0	1,-3	-	-	19.472	ALTERNATIVE:1
ENSMUSG00000059857	Ntng1	ENSMUST00000156177	ENSMUSP00000119534	TRANSLATION	protein_coding	-	CCDS59653.1	1	460	6	4.48	6.4	218.1	0	1,-3	-	-	14.114	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000072596	ENSMUSP00000072397	TRANSLATION	protein_coding	-	CCDS38604.1	1	539	6	5.69	6.4	275.9	0	1,-3	-	-	20	PRINCIPAL:2
ENSMUSG00000059857	Ntng1	ENSMUST00000106571	ENSMUSP00000102181	TRANSLATION	protein_coding	-	-	5	481	6	4.306	6.4	218.1	0	1,-3	-	-	13.766	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000138953	ENSMUSP00000116213	TRANSLATION	protein_coding	-	CCDS59654.1	1	480	6	4.57	6.4	218.1	0	1,-3	-	-	14.294	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000189335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059857	Ntng1	ENSMUST00000133268	ENSMUSP00000117371	TRANSLATION	protein_coding	-	CCDS59651.1	1	438	6	4.33	6.4	218.1	0	1,-3	-	-	13.814	MINOR
ENSMUSG00000059857	Ntng1	ENSMUST00000131027	ENSMUSP00000118800	TRANSLATION	protein_coding	-	-	1	494	6	4.89	2.8	246.3	0	1,-3	-	-	15.288	MINOR
ENSMUSG00000028102	Pex11b	ENSMUST00000118557	ENSMUSP00000113365	TRANSLATION	protein_coding	-	CCDS17643.1	1	259	0	0	7.5	248.1	1	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000028102	Pex11b	ENSMUST00000144962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028102	Pex11b	ENSMUST00000139523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028102	Pex11b	ENSMUST00000147821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028102	Pex11b	ENSMUST00000048766	ENSMUSP00000037962	TRANSLATION	protein_coding	-	CCDS17643.1	1	259	0	0	7.5	248.1	1	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000028102	Pex11b	ENSMUST00000156015	ENSMUSP00000115956	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028102	Pex11b	ENSMUST00000165842	ENSMUSP00000126631	TRANSLATION	protein_coding	-	CCDS51006.1	2	245	0	0	2.9	220.6	1	-4,-1	-	-	5.226	MINOR
ENSMUSG00000040747	Cd53	ENSMUST00000038845	ENSMUSP00000035781	TRANSLATION	protein_coding	-	CCDS17728.1	1	219	0	3.77	5.1	175.9	0	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033285	Wdr3	ENSMUST00000129319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033285	Wdr3	ENSMUST00000125059	ENSMUSP00000135731	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033285	Wdr3	ENSMUST00000146989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033285	Wdr3	ENSMUST00000135812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033285	Wdr3	ENSMUST00000197602	ENSMUSP00000143010	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0.2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033285	Wdr3	ENSMUST00000052120	ENSMUSP00000060613	TRANSLATION	protein_coding	-	CCDS17674.1	1	942	0	12.98	7.5	247.4	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027695	Pld1	ENSMUST00000195622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027695	Pld1	ENSMUST00000131842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027695	Pld1	ENSMUST00000127139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027695	Pld1	ENSMUST00000123539	ENSMUSP00000118727	TRANSLATION	protein_coding	-	-	5	1074	3	0	3.9	188.2	0	-4,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000027695	Pld1	ENSMUST00000126594	ENSMUSP00000121569	TRANSLATION	protein_coding	start/stop	-	2	201	1	0	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027695	Pld1	ENSMUST00000120834	ENSMUSP00000113810	TRANSLATION	protein_coding	-	CCDS17275.1	1	1036	3	0	3.9	188.2	0	-4,-6	-	-	10	PRINCIPAL:2
ENSMUSG00000027695	Pld1	ENSMUST00000149017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027695	Pld1	ENSMUST00000067757	ENSMUSP00000064694	TRANSLATION	protein_coding	-	CCDS17275.1	1	1036	3	0	3.9	188.2	0	-4,-6	-	-	10	PRINCIPAL:2
ENSMUSG00000027695	Pld1	ENSMUST00000148827	ENSMUSP00000120273	TRANSLATION	protein_coding	start	-	1	871	3	0	0	65.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027695	Pld1	ENSMUST00000125338	ENSMUSP00000121318	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	30.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019528	Gyg	ENSMUST00000178328	ENSMUSP00000136035	TRANSLATION	protein_coding	-	CCDS50873.1	1	333	19	6	3.9	62.1	0	-4,-7	-	-	18.472	PRINCIPAL:2
ENSMUSG00000019528	Gyg	ENSMUST00000184552	ENSMUSP00000138949	TRANSLATION	protein_coding	start	-	5	372	19	5.75	0	68.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019528	Gyg	ENSMUST00000118015	ENSMUSP00000114019	TRANSLATION	protein_coding	-	-	1	377	19	6	0	68.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000019528	Gyg	ENSMUST00000135475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068855	H2ac20	ENSMUST00000090782	ENSMUSP00000088288	TRANSLATION	protein_coding	-	CCDS17634.1	-	129	0	1	14.8	135.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000027550	Lrrcc1	ENSMUST00000108370	ENSMUSP00000104007	TRANSLATION	protein_coding	-	CCDS38390.1	1	993	0	3.07	0.5	28	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027550	Lrrcc1	ENSMUST00000169079	ENSMUSP00000126560	TRANSLATION	protein_coding	-	CCDS50866.1	1	1026	0	3.07	2.7	28	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027550	Lrrcc1	ENSMUST00000091325	ENSMUSP00000088875	TRANSLATION	protein_coding	-	CCDS50865.1	1	1010	0	3.07	0.5	28	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027550	Lrrcc1	ENSMUST00000171620	ENSMUSP00000128252	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027550	Lrrcc1	ENSMUST00000169799	ENSMUSP00000126592	TRANSLATION	protein_coding	start/stop	-	5	231	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027550	Lrrcc1	ENSMUST00000167858	ENSMUSP00000129368	TRANSLATION	protein_coding	start	-	1	581	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027550	Lrrcc1	ENSMUST00000165436	ENSMUSP00000129430	TRANSLATION	nonsense_mediated_decay	-	-	5	178	0	2.79	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027550	Lrrcc1	ENSMUST00000163660	ENSMUSP00000128733	TRANSLATION	protein_coding	stop	-	5	716	0	0.84	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039865	Slc44a3	ENSMUST00000198335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039865	Slc44a3	ENSMUST00000039197	ENSMUSP00000040210	TRANSLATION	protein_coding	-	CCDS51060.1	1	656	0	0	0.5	269.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039865	Slc44a3	ENSMUST00000199422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074677	Sirpb1c	ENSMUST00000124067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074677	Sirpb1c	ENSMUST00000191802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074677	Sirpb1c	ENSMUST00000148194	ENSMUSP00000120527	TRANSLATION	protein_coding	start	-	5	237	0	2.5	0	88.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074677	Sirpb1c	ENSMUST00000108354	ENSMUSP00000103991	TRANSLATION	protein_coding	-	-	1	362	0	3.95	0	147.2	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000074677	Sirpb1c	ENSMUST00000050623	ENSMUSP00000061216	TRANSLATION	protein_coding	-	CCDS50868.1	1	391	0	3.95	0.5	147.2	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000074677	Sirpb1c	ENSMUST00000108350	ENSMUSP00000103987	TRANSLATION	protein_coding	-	-	1	391	0	3.95	0	147.2	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000074677	Sirpb1c	ENSMUST00000108352	ENSMUSP00000103989	TRANSLATION	protein_coding	-	-	1	397	0	3.95	0	147.2	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000074677	Sirpb1c	ENSMUST00000108349	ENSMUSP00000103986	TRANSLATION	protein_coding	-	-	1	389	0	3.95	0	147.2	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000027867	Spag17	ENSMUST00000164539	ENSMUSP00000134066	TRANSLATION	protein_coding	-	CCDS57248.1	5	2320	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027867	Spag17	ENSMUST00000127518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027867	Spag17	ENSMUST00000152586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027867	Spag17	ENSMUST00000143050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027715	Ccna2	ENSMUST00000147380	ENSMUSP00000118239	TRANSLATION	nonsense_mediated_decay	-	-	5	153	0	0	0	133.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027715	Ccna2	ENSMUST00000156575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027715	Ccna2	ENSMUST00000029270	ENSMUSP00000029270	TRANSLATION	protein_coding	-	CCDS17313.1	1	422	0	5.5	0.5	416.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027715	Ccna2	ENSMUST00000196316	ENSMUSP00000142946	TRANSLATION	protein_coding	-	-	5	285	0	5.5	0	258.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000027715	Ccna2	ENSMUST00000145309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062006	Rpl34	ENSMUST00000062601	ENSMUSP00000086614	TRANSLATION	protein_coding	-	CCDS17841.1	1	117	4	3.15	21.5	145	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000062006	Rpl34	ENSMUST00000133802	ENSMUSP00000142951	TRANSLATION	protein_coding	-	-	2	90	4	2.55	0	133.4	0	-4,-1	-	-	14.104	MINOR
ENSMUSG00000062006	Rpl34	ENSMUST00000079085	ENSMUSP00000078092	TRANSLATION	protein_coding	-	CCDS17841.1	1	117	4	3.15	21.5	145	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000062006	Rpl34	ENSMUST00000196202	ENSMUSP00000142486	TRANSLATION	protein_coding	stop	-	2	117	4	3.15	21.5	145	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000062006	Rpl34	ENSMUST00000199911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062006	Rpl34	ENSMUST00000200517	ENSMUSP00000143752	TRANSLATION	protein_coding	stop	-	2	59	2	1.55	0	80	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000062006	Rpl34	ENSMUST00000135691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062006	Rpl34	ENSMUST00000199001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040322	Slc25a24	ENSMUST00000140786	ENSMUSP00000143109	TRANSLATION	nonsense_mediated_decay	-	-	3	110	13	2	0	41.5	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000040322	Slc25a24	ENSMUST00000029477	ENSMUSP00000029477	TRANSLATION	protein_coding	-	CCDS17772.1	1	475	17	7.54	6.3	321.5	0	-2,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000074445	Sprr2a3	ENSMUST00000193337	ENSMUSP00000142110	TRANSLATION	protein_coding	-	CCDS84652.1	1	83	0	0	0.5	34.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000074445	Sprr2a3	ENSMUST00000090872	ENSMUSP00000088387	TRANSLATION	protein_coding	-	CCDS84652.1	-	83	0	0	0.5	34.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000064220	H2ac18	ENSMUST00000078756	ENSMUSP00000077814	TRANSLATION	protein_coding	-	CCDS57242.1	-	130	0	1	8.8	135.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074483	Bglap	ENSMUST00000128732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074483	Bglap	ENSMUST00000076048	ENSMUSP00000075425	TRANSLATION	protein_coding	-	CCDS17474.1	1	95	2	1.2	1.5	0	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000042312	S100a13	ENSMUST00000048138	ENSMUSP00000047737	TRANSLATION	protein_coding	-	-	1	98	10	2	5.9	49	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000105734	4930558C23Rik	ENSMUST00000196239	ENSMUSP00000147291	TRANSLATION	protein_coding	-	-	1	59	0	0	0	32.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000042520	Ubap2l	ENSMUST00000196917	ENSMUSP00000142602	TRANSLATION	protein_coding	stop	-	3	50	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000090908	ENSMUSP00000088424	TRANSLATION	protein_coding	-	CCDS79959.1	1	983	0	3.5	7.5	80.5	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000042520	Ubap2l	ENSMUST00000199929	ENSMUSP00000142488	TRANSLATION	protein_coding	stop	-	2	57	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000198282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000064639	ENSMUSP00000066138	TRANSLATION	protein_coding	-	CCDS50966.1	1	1112	0	3.5	1.7	80.5	0	-4,-7	-	-	12.324	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000196747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000199016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000200195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000197903	ENSMUSP00000143519	TRANSLATION	protein_coding	stop	-	3	81	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000197177	ENSMUSP00000143246	TRANSLATION	protein_coding	start	-	1	497	0	0	0	56.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000199612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000196843	ENSMUSP00000143459	TRANSLATION	protein_coding	-	CCDS79960.1	5	1107	0	3.5	7.4	80.5	0	-4,-7	-	-	14.955	ALTERNATIVE:1
ENSMUSG00000042520	Ubap2l	ENSMUST00000199301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000029553	ENSMUSP00000029553	TRANSLATION	protein_coding	-	CCDS38498.1	1	1105	0	3.5	4	80.5	0	-4,-7	-	-	13.386	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000195995	ENSMUSP00000143638	TRANSLATION	protein_coding	-	CCDS50965.1	1	1014	0	3.5	5.1	80.5	0	-4,-7	-	-	13.893	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000196568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000196952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000197633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000199834	ENSMUSP00000143254	TRANSLATION	protein_coding	-	CCDS50965.1	1	1014	0	3.5	5.1	80.5	0	-4,-7	-	-	13.893	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000199050	ENSMUSP00000142719	TRANSLATION	protein_coding	start	-	3	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000200301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042520	Ubap2l	ENSMUST00000196633	ENSMUSP00000143423	TRANSLATION	protein_coding	stop	-	3	105	0	3.5	0	24.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042520	Ubap2l	ENSMUST00000198322	ENSMUSP00000142524	TRANSLATION	protein_coding	-	CCDS79958.1	1	1067	0	3.5	5.3	80.5	0	-4,-7	-	-	13.986	PRINCIPAL:4
ENSMUSG00000037174	Elf2	ENSMUST00000195432	ENSMUSP00000142300	TRANSLATION	protein_coding	-	-	1	59	0	0	0	32.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000091144	ENSMUSP00000088678	TRANSLATION	protein_coding	-	-	5	504	0	1.2	2.4	147.9	0	-4,-5	-	-	5.595	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000194209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037174	Elf2	ENSMUST00000163748	ENSMUSP00000126871	TRANSLATION	protein_coding	-	CCDS17337.1	1	593	0	1.62	1.5	236.8	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000037174	Elf2	ENSMUST00000184677	ENSMUSP00000139199	TRANSLATION	nonsense_mediated_decay	-	-	3	113	0	0	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000156983	ENSMUSP00000141525	TRANSLATION	protein_coding	stop	-	5	65	0	0	0	32.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000194641	ENSMUSP00000141197	TRANSLATION	protein_coding	-	CCDS17337.1	5	593	0	1.62	1.5	236.8	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000037174	Elf2	ENSMUST00000183338	ENSMUSP00000139358	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	85.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000108053	ENSMUSP00000103688	TRANSLATION	protein_coding	-	CCDS71241.1	1	533	0	1.62	3.9	147.9	0	-4,-5	-	-	7.666	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000183463	ENSMUSP00000139360	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	0	0	86.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000062009	ENSMUSP00000061076	TRANSLATION	protein_coding	-	CCDS71242.1	1	581	0	1.62	1.5	236.8	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000037174	Elf2	ENSMUST00000108051	ENSMUSP00000103686	TRANSLATION	protein_coding	-	CCDS71240.1	1	521	0	1.62	3.9	147.9	0	-4,-5	-	-	7.666	MINOR
ENSMUSG00000037174	Elf2	ENSMUST00000193909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025757	Hspa4l	ENSMUST00000108086	ENSMUSP00000103721	TRANSLATION	protein_coding	-	-	1	817	18	11.77	0	572.9	0	-4,-7	-	-	10.488	MINOR
ENSMUSG00000025757	Hspa4l	ENSMUST00000203496	ENSMUSP00000145243	TRANSLATION	protein_coding	stop	-	2	158	6	4.25	0	125.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025757	Hspa4l	ENSMUST00000203425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025757	Hspa4l	ENSMUST00000204174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025757	Hspa4l	ENSMUST00000204702	ENSMUSP00000145468	TRANSLATION	protein_coding	-	CCDS17327.1	1	838	22	12.42	8.8	632	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000025757	Hspa4l	ENSMUST00000203353	ENSMUSP00000144787	TRANSLATION	protein_coding	stop	-	5	571	22	11.15	0	601.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025757	Hspa4l	ENSMUST00000203267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000196188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000150070	ENSMUSP00000121714	TRANSLATION	protein_coding	stop	-	5	144	5	3.73	0	65.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062908	Acadm	ENSMUST00000156310	ENSMUSP00000122989	TRANSLATION	nonsense_mediated_decay	-	-	3	157	0	2.08	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000062908	Acadm	ENSMUST00000200250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000199342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000137161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000196688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000072697	ENSMUSP00000072483	TRANSLATION	protein_coding	-	CCDS17924.1	1	421	29	10.91	6.3	352.4	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000062908	Acadm	ENSMUST00000135724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062908	Acadm	ENSMUST00000130713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027965	Olfm3	ENSMUST00000081752	ENSMUSP00000080448	TRANSLATION	protein_coding	-	CCDS17779.1	1	458	0	5.5	17.3	440.4	0	1,-2	-	-	14.842	ALTERNATIVE:1
ENSMUSG00000027965	Olfm3	ENSMUST00000149158	ENSMUSP00000121097	TRANSLATION	protein_coding	stop	-	2	211	0	3.75	0	167.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027965	Olfm3	ENSMUST00000051309	ENSMUSP00000060985	TRANSLATION	protein_coding	-	CCDS17780.1	1	478	0	6.08	9.8	440.4	0	-2,-5	-	-	14.16	PRINCIPAL:4
ENSMUSG00000027925	Sprr2j-ps	ENSMUST00000029533	ENSMUSP00000029533	TRANSLATION	protein_coding	-	-	1	109	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000027840	Wnt2b	ENSMUST00000198108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027840	Wnt2b	ENSMUST00000029429	ENSMUSP00000029429	TRANSLATION	protein_coding	-	CCDS17706.1	1	389	0	2.34	2.7	404.8	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027793	Ccna1	ENSMUST00000198320	ENSMUSP00000143447	TRANSLATION	protein_coding	-	CCDS17356.1	1	421	0	5.12	3.9	258.3	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027793	Ccna1	ENSMUST00000029368	ENSMUSP00000029368	TRANSLATION	protein_coding	-	CCDS17356.1	1	421	0	5.12	3.9	258.3	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027793	Ccna1	ENSMUST00000197238	ENSMUSP00000142692	TRANSLATION	protein_coding	-	CCDS17356.1	5	421	0	5.12	3.9	258.3	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000027793	Ccna1	ENSMUST00000199144	ENSMUSP00000143275	TRANSLATION	protein_coding	stop	-	5	165	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027793	Ccna1	ENSMUST00000199352	ENSMUSP00000143555	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027793	Ccna1	ENSMUST00000198102	ENSMUSP00000142706	TRANSLATION	protein_coding	start	-	3	250	0	3.62	0	207.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048304	Slitrk3	ENSMUST00000059407	ENSMUSP00000088561	TRANSLATION	protein_coding	-	CCDS17410.1	1	980	0	0.28	6.3	98	1	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000048304	Slitrk3	ENSMUST00000192477	ENSMUSP00000141236	TRANSLATION	protein_coding	-	CCDS17410.1	1	980	0	0.28	6.3	98	1	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000078161	Erich3	ENSMUST00000051862	ENSMUSP00000062837	TRANSLATION	protein_coding	-	CCDS51099.1	1	517	0	0	0.5	184.4	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000078161	Erich3	ENSMUST00000189969	ENSMUSP00000140929	TRANSLATION	protein_coding	start	-	-	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078161	Erich3	ENSMUST00000098496	ENSMUSP00000096097	TRANSLATION	protein_coding	-	-	5	1637	0	0	0	184.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000078161	Erich3	ENSMUST00000192912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078657	Crnn	ENSMUST00000192372	ENSMUSP00000141904	TRANSLATION	protein_coding	start	-	5	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078657	Crnn	ENSMUST00000107300	ENSMUSP00000102921	TRANSLATION	protein_coding	-	CCDS38524.1	3	520	4	1.6	0.5	38.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078657	Crnn	ENSMUST00000195515	ENSMUSP00000141980	TRANSLATION	protein_coding	-	CCDS38524.1	5	520	4	1.6	0.5	38.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027923	Lce1b	ENSMUST00000029531	ENSMUSP00000029531	TRANSLATION	protein_coding	-	CCDS17563.1	1	137	0	0	0.5	39.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044468	Tent5c	ENSMUST00000061455	ENSMUSP00000056872	TRANSLATION	protein_coding	-	CCDS51017.1	1	391	0	0	12.8	526.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000044468	Tent5c	ENSMUST00000139833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044468	Tent5c	ENSMUST00000128107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028012	Rrh	ENSMUST00000196317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028012	Rrh	ENSMUST00000197535	ENSMUSP00000143245	TRANSLATION	nonsense_mediated_decay	start	-	3	130	4	1.68	0	49.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000028012	Rrh	ENSMUST00000171313	ENSMUSP00000132360	TRANSLATION	protein_coding	-	CCDS38633.1	1	337	19	5.61	1.5	150.3	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028012	Rrh	ENSMUST00000196902	ENSMUSP00000143093	TRANSLATION	protein_coding	-	CCDS38633.1	1	337	19	5.61	1.5	150.3	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028012	Rrh	ENSMUST00000197295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028012	Rrh	ENSMUST00000196281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028012	Rrh	ENSMUST00000029648	ENSMUSP00000029648	TRANSLATION	protein_coding	-	-	1	379	19	5.61	0	130.9	13	-4,-7	-	-	16.836	MINOR
ENSMUSG00000028012	Rrh	ENSMUST00000200079	ENSMUSP00000143054	TRANSLATION	protein_coding	-	-	1	240	14	4.01	1	62.3	8	-4,-7	-	-	6.186	MINOR
ENSMUSG00000061143	Maml3	ENSMUST00000193568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061143	Maml3	ENSMUST00000121440	ENSMUSP00000112637	TRANSLATION	protein_coding	-	CCDS17342.2	1	1135	0	0.6	0.5	80.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061143	Maml3	ENSMUST00000118075	ENSMUSP00000113677	TRANSLATION	protein_coding	-	-	1	489	0	0	0	0	0	2,-1	-	-	0	MINOR
ENSMUSG00000028042	Zbtb7b	ENSMUST00000142119	ENSMUSP00000115425	TRANSLATION	protein_coding	stop	-	3	112	0	2.13	0	80.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028042	Zbtb7b	ENSMUST00000124783	ENSMUSP00000120641	TRANSLATION	protein_coding	stop	-	3	29	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028042	Zbtb7b	ENSMUST00000107432	ENSMUSP00000103055	TRANSLATION	protein_coding	-	CCDS17504.1	1	544	15	3.39	3.9	156.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028042	Zbtb7b	ENSMUST00000107433	ENSMUSP00000103056	TRANSLATION	protein_coding	-	CCDS17504.1	1	544	15	3.39	3.9	156.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028042	Zbtb7b	ENSMUST00000139094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028042	Zbtb7b	ENSMUST00000126027	ENSMUSP00000123348	TRANSLATION	protein_coding	stop	-	2	124	0	2.63	0	91.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028042	Zbtb7b	ENSMUST00000148361	ENSMUSP00000121498	TRANSLATION	protein_coding	stop	-	2	102	0	1.8	0	62.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028042	Zbtb7b	ENSMUST00000107435	ENSMUSP00000103058	TRANSLATION	protein_coding	-	CCDS17504.1	1	544	15	3.39	3.9	156.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028042	Zbtb7b	ENSMUST00000029677	ENSMUSP00000029677	TRANSLATION	protein_coding	-	CCDS17504.1	1	544	15	3.39	3.9	156.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000000339	Rtca	ENSMUST00000124486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000339	Rtca	ENSMUST00000143425	ENSMUSP00000121357	TRANSLATION	nonsense_mediated_decay	-	-	3	113	9	2.4	0	116.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000339	Rtca	ENSMUST00000140677	ENSMUSP00000117610	TRANSLATION	nonsense_mediated_decay	-	-	5	52	7	1.3	0	48.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000339	Rtca	ENSMUST00000153005	ENSMUSP00000119463	TRANSLATION	protein_coding	stop	-	5	142	3	2.73	0	128.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000339	Rtca	ENSMUST00000000348	ENSMUSP00000000348	TRANSLATION	protein_coding	-	CCDS17786.1	1	366	18	7.82	12.8	385.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028126	Pip5k1a	ENSMUST00000107233	ENSMUSP00000102852	TRANSLATION	protein_coding	-	CCDS79980.1	1	547	2	7.15	0.5	311.8	0	-3,-6	-	-	14	ALTERNATIVE:2
ENSMUSG00000028126	Pip5k1a	ENSMUST00000107232	ENSMUSP00000102851	TRANSLATION	protein_coding	-	-	5	497	2	7.15	0	311.8	0	-4,-7	-	-	14	ALTERNATIVE:2
ENSMUSG00000028126	Pip5k1a	ENSMUST00000107229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028126	Pip5k1a	ENSMUST00000107231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028126	Pip5k1a	ENSMUST00000151335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028126	Pip5k1a	ENSMUST00000107236	ENSMUSP00000102855	TRANSLATION	protein_coding	-	CCDS38542.1	1	546	2	7.15	0.5	311.8	0	-3,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000028126	Pip5k1a	ENSMUST00000005768	ENSMUSP00000005768	TRANSLATION	protein_coding	-	-	5	545	2	7.15	0	311.8	0	-4,-7	-	-	14	ALTERNATIVE:2
ENSMUSG00000028081	Rps3a1	ENSMUST00000029722	ENSMUSP00000029722	TRANSLATION	protein_coding	-	CCDS17446.1	1	264	0	5.75	19	359.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038298	Pdzk1	ENSMUST00000153256	ENSMUSP00000118846	TRANSLATION	nonsense_mediated_decay	-	-	1	519	0	8.5	1.5	201.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038298	Pdzk1	ENSMUST00000107069	ENSMUSP00000102684	TRANSLATION	protein_coding	-	CCDS17649.1	1	519	0	8.5	1.5	201.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038298	Pdzk1	ENSMUST00000135031	ENSMUSP00000114157	TRANSLATION	protein_coding	stop	-	2	125	0	2.75	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038298	Pdzk1	ENSMUST00000058865	ENSMUSP00000058936	TRANSLATION	protein_coding	-	CCDS17649.1	1	519	0	8.5	1.5	201.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038298	Pdzk1	ENSMUST00000138014	ENSMUSP00000115584	TRANSLATION	protein_coding	stop	-	3	153	0	2.75	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038298	Pdzk1	ENSMUST00000128789	ENSMUSP00000123166	TRANSLATION	protein_coding	stop	-	2	50	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038298	Pdzk1	ENSMUST00000107070	ENSMUSP00000102685	TRANSLATION	protein_coding	-	CCDS17649.1	1	519	0	8.5	1.5	201.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037894	H2az1	ENSMUST00000172696	ENSMUSP00000133541	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037894	H2az1	ENSMUST00000173790	ENSMUSP00000133339	TRANSLATION	protein_coding	-	-	5	87	0	2.396	0	47.8	0	-4,-6	-	-	4.386	MINOR
ENSMUSG00000037894	H2az1	ENSMUST00000125821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037894	H2az1	ENSMUST00000138010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037894	H2az1	ENSMUST00000174561	ENSMUSP00000134059	TRANSLATION	protein_coding	-	CCDS84676.1	1	105	0	3.41	0.5	82.4	0	-4,-6	-	-	8.49	MINOR
ENSMUSG00000037894	H2az1	ENSMUST00000041045	ENSMUSP00000036907	TRANSLATION	protein_coding	-	CCDS38647.1	1	128	0	4.07	21.5	118.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037894	H2az1	ENSMUST00000173666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038256	Bcl9	ENSMUST00000127319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038256	Bcl9	ENSMUST00000135247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038256	Bcl9	ENSMUST00000132266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038256	Bcl9	ENSMUST00000134695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038256	Bcl9	ENSMUST00000141861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038256	Bcl9	ENSMUST00000196586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038256	Bcl9	ENSMUST00000166341	ENSMUSP00000131692	TRANSLATION	protein_coding	-	CCDS17654.1	1	1425	0	1.6	8.8	66.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000038256	Bcl9	ENSMUST00000046521	ENSMUSP00000046152	TRANSLATION	protein_coding	-	CCDS17654.1	1	1425	0	1.6	8.8	66.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000042672	Dcst1	ENSMUST00000124766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042672	Dcst1	ENSMUST00000200174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042672	Dcst1	ENSMUST00000128002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042672	Dcst1	ENSMUST00000070820	ENSMUSP00000065502	TRANSLATION	protein_coding	-	CCDS38490.1	1	732	7	0	0.5	176.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042672	Dcst1	ENSMUST00000127766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042672	Dcst1	ENSMUST00000139467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028165	Cisd2	ENSMUST00000198784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028165	Cisd2	ENSMUST00000029815	ENSMUSP00000029815	TRANSLATION	protein_coding	-	CCDS17856.1	1	135	11	1.75	15	135.7	1	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028165	Cisd2	ENSMUST00000196942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028165	Cisd2	ENSMUST00000120988	ENSMUSP00000113842	TRANSLATION	protein_coding	-	-	1	108	4	1	0	97.5	1	-4,-7	-	-	8.466	MINOR
ENSMUSG00000027742	Cog6	ENSMUST00000194779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027742	Cog6	ENSMUST00000195183	ENSMUSP00000141733	TRANSLATION	protein_coding	stop	-	5	174	0	0	0	105.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027742	Cog6	ENSMUST00000192788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027742	Cog6	ENSMUST00000036665	ENSMUSP00000048603	TRANSLATION	protein_coding	-	CCDS50905.1	1	657	0	0	6.3	697.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027742	Cog6	ENSMUST00000193043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027742	Cog6	ENSMUST00000193432	ENSMUSP00000141339	TRANSLATION	protein_coding	-	-	1	625	0	0	0	648	0	-4,-5	-	-	3.012	MINOR
ENSMUSG00000027822	Slc33a1	ENSMUST00000029402	ENSMUSP00000029402	TRANSLATION	protein_coding	-	CCDS17382.1	1	550	0	0	3.9	0	6	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000027822	Slc33a1	ENSMUST00000161659	ENSMUSP00000123986	TRANSLATION	protein_coding	-	CCDS17382.1	1	550	0	0	3.9	0	6	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000027822	Slc33a1	ENSMUST00000160883	ENSMUSP00000125713	TRANSLATION	protein_coding	-	CCDS17382.1	5	550	0	0	3.9	0	6	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000103362	Tdpoz2	ENSMUST00000191960	ENSMUSP00000141299	TRANSLATION	protein_coding	-	CCDS57230.1	-	360	0	1	0.5	127.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058005	Tdpoz3	ENSMUST00000081780	ENSMUSP00000080472	TRANSLATION	protein_coding	-	CCDS17586.1	-	365	0	1	0.5	95.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028051	Hcn3	ENSMUST00000133368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028051	Hcn3	ENSMUST00000132156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028051	Hcn3	ENSMUST00000029686	ENSMUSP00000029686	TRANSLATION	protein_coding	-	CCDS17490.1	1	779	12	6.7	0.5	206.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028051	Hcn3	ENSMUST00000127654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043472	Lce3d	ENSMUST00000059053	ENSMUSP00000130993	TRANSLATION	protein_coding	-	CCDS57228.1	1	98	0	0	0.5	103.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000040896	Kcnd3	ENSMUST00000141694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040896	Kcnd3	ENSMUST00000118360	ENSMUSP00000113436	TRANSLATION	protein_coding	-	CCDS17709.1	5	655	0	1.8	11	443.8	5	0,-5	-	-	14.676	ALTERNATIVE:1
ENSMUSG00000040896	Kcnd3	ENSMUST00000098761	ENSMUSP00000096357	TRANSLATION	protein_coding	-	CCDS17708.1	1	636	0	1.8	8.8	449.2	5	0,-5	-	-	14.34	ALTERNATIVE:1
ENSMUSG00000040896	Kcnd3	ENSMUST00000147209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040896	Kcnd3	ENSMUST00000079169	ENSMUSP00000078169	TRANSLATION	protein_coding	-	CCDS17709.1	1	655	0	1.8	11	443.8	5	0,-5	-	-	14.676	PRINCIPAL:4
ENSMUSG00000036353	P2ry12	ENSMUST00000050360	ENSMUSP00000051353	TRANSLATION	protein_coding	-	CCDS17373.1	1	347	0	2	1.5	106	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036353	P2ry12	ENSMUST00000199609	ENSMUSP00000143521	TRANSLATION	protein_coding	-	CCDS17373.1	3	347	0	2	1.5	106	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036353	P2ry12	ENSMUST00000196583	ENSMUSP00000143036	TRANSLATION	protein_coding	-	CCDS17373.1	5	347	0	2	1.5	106	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036353	P2ry12	ENSMUST00000199675	ENSMUSP00000143706	TRANSLATION	protein_coding	stop	-	1	116	0	1	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000036353	P2ry12	ENSMUST00000170388	ENSMUSP00000126819	TRANSLATION	protein_coding	-	CCDS17373.1	1	347	0	2	1.5	106	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050635	Sprr2f	ENSMUST00000050397	ENSMUSP00000050902	TRANSLATION	protein_coding	-	CCDS57226.1	1	76	2	0	0.5	71	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000015749	Anp32e	ENSMUST00000165307	ENSMUSP00000128483	TRANSLATION	protein_coding	-	CCDS17626.1	1	260	0	5.15	0.5	38.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000015749	Anp32e	ENSMUST00000015893	ENSMUSP00000015893	TRANSLATION	protein_coding	-	CCDS57238.1	1	248	0	5.15	0.5	38.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000015749	Anp32e	ENSMUST00000167876	ENSMUSP00000132580	TRANSLATION	protein_coding	stop	-	3	171	0	3.65	0	38.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000168471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015749	Anp32e	ENSMUST00000170213	ENSMUSP00000131777	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000171035	ENSMUSP00000128298	TRANSLATION	protein_coding	stop	-	3	107	0	3.25	0	38.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000171368	ENSMUSP00000130599	TRANSLATION	protein_coding	-	CCDS57239.1	3	137	0	1.4	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000168106	ENSMUSP00000132357	TRANSLATION	protein_coding	-	-	5	219	0	4.15	0	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000170125	ENSMUSP00000129931	TRANSLATION	protein_coding	-	-	3	109	0	2.25	0	0	0	-4,-5	-	-	0.198	MINOR
ENSMUSG00000015749	Anp32e	ENSMUST00000169426	ENSMUSP00000142810	TRANSLATION	protein_coding	-	-	5	71	0	0.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074435	Smcp	ENSMUST00000098888	ENSMUSP00000096487	TRANSLATION	protein_coding	-	-	1	143	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074435	Smcp	ENSMUST00000194965	ENSMUSP00000142023	TRANSLATION	protein_coding	-	-	3	143	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000041355	Ssr2	ENSMUST00000193934	ENSMUSP00000141325	TRANSLATION	protein_coding	-	-	3	164	0	0	0	97.5	1	4,-1	-	-	0	MINOR
ENSMUSG00000041355	Ssr2	ENSMUST00000192688	ENSMUSP00000141471	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	158.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000041355	Ssr2	ENSMUST00000193069	ENSMUSP00000141389	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000041355	Ssr2	ENSMUST00000195014	ENSMUSP00000141441	TRANSLATION	protein_coding	-	CCDS17480.1	1	183	0	0	8.3	235.4	1	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000041355	Ssr2	ENSMUST00000194604	ENSMUSP00000141591	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000041355	Ssr2	ENSMUST00000192495	ENSMUSP00000141922	TRANSLATION	protein_coding	-	-	5	185	0	0	0	208.5	1	4,-1	-	-	4.386	MINOR
ENSMUSG00000041355	Ssr2	ENSMUST00000035785	ENSMUSP00000045456	TRANSLATION	protein_coding	-	CCDS17480.1	1	183	0	0	8.3	235.4	1	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000069118	1700008P02Rik	ENSMUST00000091364	ENSMUSP00000088923	TRANSLATION	protein_coding	-	CCDS50858.1	1	175	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000106447	Gm42957	ENSMUST00000137564	ENSMUSP00000121011	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	366	0	2.38	0	180.9	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000023084	Lrrc71	ENSMUST00000172985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023084	Lrrc71	ENSMUST00000023846	ENSMUSP00000023846	TRANSLATION	protein_coding	-	CCDS50946.1	1	558	0	2.48	1.5	50.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000023084	Lrrc71	ENSMUST00000174208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023084	Lrrc71	ENSMUST00000174581	ENSMUSP00000134711	TRANSLATION	protein_coding	start	-	3	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023084	Lrrc71	ENSMUST00000174381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027913	Crct1	ENSMUST00000029521	ENSMUSP00000029521	TRANSLATION	protein_coding	-	CCDS17578.1	1	102	0	0	0.5	111.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027913	Crct1	ENSMUST00000107301	ENSMUSP00000102922	TRANSLATION	protein_coding	-	CCDS17578.1	2	102	0	0	0.5	111.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000105518	Gm42674	ENSMUST00000107330	ENSMUSP00000102953	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	64	5	1.4	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027709	Mccc1	ENSMUST00000200162	ENSMUSP00000143396	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000027709	Mccc1	ENSMUST00000200552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027709	Mccc1	ENSMUST00000029259	ENSMUSP00000029259	TRANSLATION	protein_coding	-	CCDS17307.1	1	717	26	14.69	1.5	595.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000027709	Mccc1	ENSMUST00000197580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027709	Mccc1	ENSMUST00000200163	ENSMUSP00000143039	TRANSLATION	nonsense_mediated_decay	start	-	5	201	18	4.75	0	225.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027709	Mccc1	ENSMUST00000198515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027709	Mccc1	ENSMUST00000199092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027709	Mccc1	ENSMUST00000199113	ENSMUSP00000143266	TRANSLATION	nonsense_mediated_decay	-	-	1	255	12	5.86	0	242.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000053870	Fpgt	ENSMUST00000195505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053870	Fpgt	ENSMUST00000066568	ENSMUSP00000068939	TRANSLATION	protein_coding	-	CCDS38681.1	1	590	0	0	0.5	482.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000053870	Fpgt	ENSMUST00000193071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053870	Fpgt	ENSMUST00000194095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053870	Fpgt	ENSMUST00000192959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053870	Fpgt	ENSMUST00000192247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045031	Cetn4	ENSMUST00000102955	ENSMUSP00000100020	TRANSLATION	protein_coding	-	CCDS17318.1	1	168	23	3.75	7.1	158.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000045031	Cetn4	ENSMUST00000140956	ENSMUSP00000132689	TRANSLATION	protein_coding	-	-	1	116	18	2.75	0	79.6	0	-4,-5	-	-	7.938	MINOR
ENSMUSG00000045031	Cetn4	ENSMUST00000125252	ENSMUSP00000129410	TRANSLATION	protein_coding	stop	-	2	87	11	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045031	Cetn4	ENSMUST00000071400	ENSMUSP00000071349	TRANSLATION	protein_coding	-	-	5	125	19	2.75	0	109.5	0	-4,-6	-	-	10.404	MINOR
ENSMUSG00000045031	Cetn4	ENSMUST00000075537	ENSMUSP00000074975	TRANSLATION	protein_coding	-	-	3	122	15	2.75	0	110	0	-4,-6	-	-	7.764	MINOR
ENSMUSG00000068747	Sort1	ENSMUST00000129755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068747	Sort1	ENSMUST00000102632	ENSMUSP00000099692	TRANSLATION	protein_coding	-	CCDS17756.1	1	825	0	15.55	1.5	502	1	3,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000068747	Sort1	ENSMUST00000135636	ENSMUSP00000123564	TRANSLATION	protein_coding	-	CCDS80003.1	1	858	0	15.55	0.5	502	1	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000012042	4930579F01Rik	ENSMUST00000199293	ENSMUSP00000142940	TRANSLATION	protein_coding	-	CCDS80031.1	1	200	0	0	0.5	88.4	0	-4,-5	-	-	1.692	MINOR
ENSMUSG00000012042	4930579F01Rik	ENSMUST00000012186	ENSMUSP00000012186	TRANSLATION	protein_coding	-	CCDS51081.1	1	325	0	0	0.5	115.5	0	-4,-6	-	-	3.318	MINOR
ENSMUSG00000012042	4930579F01Rik	ENSMUST00000199804	ENSMUSP00000158968	TRANSLATION	protein_coding	-	-	3	327	0	0	0.5	160.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027963	Extl2	ENSMUST00000106502	ENSMUSP00000102111	TRANSLATION	protein_coding	-	CCDS17784.1	1	330	24	2.75	10.8	289.8	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000027963	Extl2	ENSMUST00000149920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027963	Extl2	ENSMUST00000029575	ENSMUSP00000029575	TRANSLATION	protein_coding	-	CCDS17784.1	1	330	24	2.75	10.8	289.8	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000027963	Extl2	ENSMUST00000128228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027963	Extl2	ENSMUST00000106501	ENSMUSP00000102110	TRANSLATION	protein_coding	-	CCDS51057.1	1	316	24	2.75	1.7	289.8	0	2,-3	-	-	18.213	MINOR
ENSMUSG00000027963	Extl2	ENSMUST00000145945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049504	Proser1	ENSMUST00000200328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049504	Proser1	ENSMUST00000058577	ENSMUSP00000055253	TRANSLATION	protein_coding	-	CCDS17346.1	1	913	0	0	1.5	81.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049504	Proser1	ENSMUST00000141418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049504	Proser1	ENSMUST00000198186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000561	Wdr77	ENSMUST00000127464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000561	Wdr77	ENSMUST00000128005	ENSMUSP00000122465	TRANSLATION	protein_coding	start	-	3	167	0	4.698	0	44.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000561	Wdr77	ENSMUST00000130994	ENSMUSP00000120517	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000561	Wdr77	ENSMUST00000151263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000561	Wdr77	ENSMUST00000010278	ENSMUSP00000010278	TRANSLATION	protein_coding	-	CCDS17715.1	1	342	0	9.41	7.5	44.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000562	Adora3	ENSMUST00000000574	ENSMUSP00000000574	TRANSLATION	protein_coding	-	CCDS17712.1	1	319	0	2.35	1.5	159.5	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000562	Adora3	ENSMUST00000164730	ENSMUSP00000126710	TRANSLATION	protein_coding	-	CCDS51036.1	1	173	0	0.6	1.5	65.9	4	-4,-1	-	-	1.914	MINOR
ENSMUSG00000000562	Adora3	ENSMUST00000197613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028268	Gbp3	ENSMUST00000029935	ENSMUSP00000029935	TRANSLATION	protein_coding	-	CCDS17879.1	1	620	16	9.45	1.5	817.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028268	Gbp3	ENSMUST00000128609	ENSMUSP00000117991	TRANSLATION	protein_coding	stop	-	5	83	11	1.75	0	118.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028268	Gbp3	ENSMUST00000106222	ENSMUSP00000101829	TRANSLATION	protein_coding	-	CCDS17879.1	1	620	16	9.45	1.5	817.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028268	Gbp3	ENSMUST00000199325	ENSMUSP00000142411	TRANSLATION	protein_coding	stop	-	3	57	7	1	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028268	Gbp3	ENSMUST00000142060	ENSMUSP00000120131	TRANSLATION	protein_coding	stop	-	3	135	12	3.25	0	220.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028268	Gbp3	ENSMUST00000142731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028268	Gbp3	ENSMUST00000106221	ENSMUSP00000101828	TRANSLATION	protein_coding	-	CCDS17879.1	1	620	16	9.45	1.5	817.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000056071	S100a9	ENSMUST00000069960	ENSMUSP00000070842	TRANSLATION	protein_coding	-	CCDS17543.1	1	113	16	2	1.5	73.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056071	S100a9	ENSMUST00000117167	ENSMUSP00000112843	TRANSLATION	protein_coding	-	CCDS17543.1	1	113	16	2	1.5	73.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036503	Rnf13	ENSMUST00000198510	ENSMUSP00000142451	TRANSLATION	protein_coding	stop	-	2	96	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000197783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036503	Rnf13	ENSMUST00000041826	ENSMUSP00000049331	TRANSLATION	protein_coding	-	CCDS50913.1	1	381	8	1.67	8.8	118.4	2	2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000036503	Rnf13	ENSMUST00000197920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036503	Rnf13	ENSMUST00000199041	ENSMUSP00000142335	TRANSLATION	protein_coding	-	CCDS79910.1	1	268	4	1.07	0.5	70	2	2,-3	-	-	9.942	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000198249	ENSMUSP00000142828	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	40	0	2,-3	-	-	-1	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000198214	ENSMUSP00000143498	TRANSLATION	protein_coding	-	CCDS84622.1	1	244	0	0.32	0.5	37.7	2	2,-3	-	-	2.31	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000198996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036503	Rnf13	ENSMUST00000200497	ENSMUSP00000142462	TRANSLATION	protein_coding	-	CCDS84623.1	1	352	4	1.07	0.5	69	2	2,-3	-	-	9.882	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000200600	ENSMUSP00000142594	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000036503	Rnf13	ENSMUST00000197205	ENSMUSP00000143692	TRANSLATION	nonsense_mediated_decay	-	-	1	166	0	0	0	30.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000028066	Pmf1	ENSMUST00000192365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028066	Pmf1	ENSMUST00000198774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028066	Pmf1	ENSMUST00000192909	ENSMUSP00000141229	TRANSLATION	nonsense_mediated_decay	start	-	3	81	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028066	Pmf1	ENSMUST00000195899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028066	Pmf1	ENSMUST00000193338	ENSMUSP00000141696	TRANSLATION	protein_coding	-	CCDS79942.1	1	133	0	2.5	1.5	25.3	0	-4,-5	-	-	3.948	MINOR
ENSMUSG00000028066	Pmf1	ENSMUST00000191622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028066	Pmf1	ENSMUST00000056370	ENSMUSP00000062420	TRANSLATION	protein_coding	-	CCDS38481.1	1	202	0	4.5	1.5	77.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027506	Tpd52	ENSMUST00000155450	ENSMUSP00000120317	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000145905	ENSMUSP00000123147	TRANSLATION	protein_coding	stop	-	5	179	0	0	0	244.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000124956	ENSMUSP00000119077	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	114.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000094381	ENSMUSP00000091943	TRANSLATION	protein_coding	-	CCDS38387.1	3	247	0	0	5.3	238.7	0	-4,-5	-	-	7.64	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000091355	ENSMUSP00000088914	TRANSLATION	protein_coding	-	CCDS38384.1	1	199	0	0	0.5	241	0	-4,-5	-	-	5.778	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000134788	ENSMUSP00000119899	TRANSLATION	protein_coding	stop	-	5	206	0	0	0	226.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000091354	ENSMUSP00000088913	TRANSLATION	protein_coding	-	CCDS38386.1	1	224	0	0	5.3	244.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027506	Tpd52	ENSMUST00000063496	ENSMUSP00000066826	TRANSLATION	protein_coding	-	CCDS38385.1	2	194	0	0	0.5	236.9	0	-4,-5	-	-	5.532	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000120143	ENSMUSP00000112830	TRANSLATION	protein_coding	-	CCDS50860.1	1	185	0	0	0.5	244.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000027506	Tpd52	ENSMUST00000129736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027506	Tpd52	ENSMUST00000121038	ENSMUSP00000113368	TRANSLATION	protein_coding	-	-	5	162	0	0	0	234.7	0	-4,-5	-	-	5.4	MINOR
ENSMUSG00000046561	Arsj	ENSMUST00000093976	ENSMUSP00000091511	TRANSLATION	protein_coding	-	CCDS17822.1	1	598	10	1.4	0.5	222	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027671	Actl6a	ENSMUST00000135400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027671	Actl6a	ENSMUST00000029214	ENSMUSP00000029214	TRANSLATION	protein_coding	-	CCDS17298.1	1	429	21	8.644	15	495.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027671	Actl6a	ENSMUST00000194781	ENSMUSP00000141543	TRANSLATION	protein_coding	stop	-	5	245	11	5.064	0	254.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027671	Actl6a	ENSMUST00000153779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027671	Actl6a	ENSMUST00000194226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027671	Actl6a	ENSMUST00000193615	ENSMUSP00000141354	TRANSLATION	nonsense_mediated_decay	-	-	3	77	5	1.28	0	32.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027671	Actl6a	ENSMUST00000126144	ENSMUSP00000114317	TRANSLATION	protein_coding	stop	-	5	204	8	4.394	0	213.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027671	Actl6a	ENSMUST00000193231	ENSMUSP00000141657	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074619	1700034I23Rik	ENSMUST00000099123	ENSMUSP00000141045	TRANSLATION	protein_coding	-	-	-	184	0	0	0	94.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051392	Olfr1402	ENSMUST00000060912	ENSMUSP00000057416	TRANSLATION	protein_coding	-	CCDS17655.1	-	320	0	0.2	1.5	175.9	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051392	Olfr1402	ENSMUST00000199297	ENSMUSP00000149714	TRANSLATION	protein_coding	-	CCDS17655.1	5	320	0	0.2	1.5	175.9	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028138	Adh5	ENSMUST00000005964	ENSMUSP00000005964	TRANSLATION	protein_coding	-	CCDS17868.1	1	374	31	7.16	12.5	85.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000028138	Adh5	ENSMUST00000198126	ENSMUSP00000143676	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028138	Adh5	ENSMUST00000159392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028138	Adh5	ENSMUST00000160625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028138	Adh5	ENSMUST00000197643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028138	Adh5	ENSMUST00000160201	ENSMUSP00000142541	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028138	Adh5	ENSMUST00000162024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036853	Mcoln3	ENSMUST00000039450	ENSMUSP00000038801	TRANSLATION	protein_coding	-	CCDS17900.1	1	553	0	5.33	1.5	47.3	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036853	Mcoln3	ENSMUST00000140214	ENSMUSP00000115655	TRANSLATION	protein_coding	stop	-	2	96	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000036853	Mcoln3	ENSMUST00000146689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054690	Emcn	ENSMUST00000197511	ENSMUSP00000142467	TRANSLATION	protein_coding	stop	-	5	219	0	0	0.5	233.7	2	2,-2	-	-	-1	MINOR
ENSMUSG00000054690	Emcn	ENSMUST00000119475	ENSMUSP00000114102	TRANSLATION	protein_coding	-	CCDS17861.1	1	248	0	0	0.5	327.4	2	2,-2	-	-	3.828	MINOR
ENSMUSG00000054690	Emcn	ENSMUST00000128985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054690	Emcn	ENSMUST00000122064	ENSMUSP00000112603	TRANSLATION	protein_coding	-	CCDS51075.1	1	261	0	0	0.5	363.6	2	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027829	Ccnl1	ENSMUST00000122919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000144810	ENSMUSP00000122824	TRANSLATION	nonsense_mediated_decay	start	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027829	Ccnl1	ENSMUST00000146284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000132998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000149729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000135719	ENSMUSP00000118394	TRANSLATION	nonsense_mediated_decay	start	-	5	146	0	2.13	0	34.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027829	Ccnl1	ENSMUST00000129002	ENSMUSP00000118377	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	2.13	0	34.4	0	-1,1	-	-	-1	MINOR
ENSMUSG00000027829	Ccnl1	ENSMUST00000029416	ENSMUSP00000029416	TRANSLATION	protein_coding	-	CCDS17390.1	1	532	0	4.735	0.5	62.1	0	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000027829	Ccnl1	ENSMUST00000154585	ENSMUSP00000119229	TRANSLATION	nonsense_mediated_decay	-	-	5	178	0	2.13	0	34.4	0	-1,1	-	-	-1	MINOR
ENSMUSG00000027829	Ccnl1	ENSMUST00000142153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000145186	ENSMUSP00000122314	TRANSLATION	nonsense_mediated_decay	start	-	3	22	0	0.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027829	Ccnl1	ENSMUST00000150304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000149160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027829	Ccnl1	ENSMUST00000148623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027962	Vcam1	ENSMUST00000029574	ENSMUSP00000029574	TRANSLATION	protein_coding	-	CCDS17785.1	1	739	0	5.845	1.5	374.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000027962	Vcam1	ENSMUST00000197031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027962	Vcam1	ENSMUST00000196309	ENSMUSP00000143260	TRANSLATION	protein_coding	stop	-	3	237	0	2.33	0	136.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000027962	Vcam1	ENSMUST00000196449	ENSMUSP00000142876	TRANSLATION	protein_coding	-	-	1	345	0	3.645	1	179.1	0	4,-1	-	-	1.602	MINOR
ENSMUSG00000034009	Rxfp1	ENSMUST00000078527	ENSMUSP00000077611	TRANSLATION	protein_coding	-	CCDS17420.1	1	758	4	10.67	5.1	227.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034009	Rxfp1	ENSMUST00000182491	ENSMUSP00000138578	TRANSLATION	nonsense_mediated_decay	-	-	1	102	4	1.28	0	32.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000034009	Rxfp1	ENSMUST00000183040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034009	Rxfp1	ENSMUST00000183199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027765	P2ry1	ENSMUST00000193943	ENSMUSP00000141371	TRANSLATION	protein_coding	-	CCDS17377.1	-	373	0	0.6	7.5	133.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027765	P2ry1	ENSMUST00000029331	ENSMUSP00000029331	TRANSLATION	protein_coding	-	CCDS17377.1	1	373	0	0.6	7.5	133.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027765	P2ry1	ENSMUST00000193201	ENSMUSP00000142006	TRANSLATION	protein_coding	-	CCDS17377.1	1	373	0	0.6	7.5	133.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028188	Spata1	ENSMUST00000200488	ENSMUSP00000143358	TRANSLATION	protein_coding	start	-	3	75	0	0	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028188	Spata1	ENSMUST00000195949	ENSMUSP00000143495	TRANSLATION	protein_coding	start/stop	-	3	137	0	0	0	142.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028188	Spata1	ENSMUST00000197684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028188	Spata1	ENSMUST00000093951	ENSMUSP00000091483	TRANSLATION	protein_coding	-	-	1	114	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028188	Spata1	ENSMUST00000123421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028188	Spata1	ENSMUST00000029839	ENSMUSP00000029839	TRANSLATION	protein_coding	-	CCDS38666.1	1	444	0	0	1.5	177.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028188	Spata1	ENSMUST00000197980	ENSMUSP00000142800	TRANSLATION	protein_coding	-	CCDS38666.1	1	444	0	0	1.5	177.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027887	Sypl2	ENSMUST00000141387	ENSMUSP00000116756	TRANSLATION	protein_coding	-	CCDS57253.1	1	264	0	0	4	131.2	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000027887	Sypl2	ENSMUST00000156371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033377	Palmd	ENSMUST00000143611	ENSMUSP00000122725	TRANSLATION	protein_coding	stop	-	5	122	0	0	0	34.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033377	Palmd	ENSMUST00000119557	ENSMUSP00000113107	TRANSLATION	protein_coding	-	-	1	551	0	0	0	182.5	0	-4,-5	-	-	5.874	ALTERNATIVE:2
ENSMUSG00000033377	Palmd	ENSMUST00000197659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033377	Palmd	ENSMUST00000040097	ENSMUSP00000044693	TRANSLATION	protein_coding	-	CCDS17793.1	1	551	0	0	1.5	184.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000039058	Ak5	ENSMUST00000198552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039058	Ak5	ENSMUST00000200062	ENSMUSP00000143636	TRANSLATION	protein_coding	start	-	3	201	9	3.6	0	154.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039058	Ak5	ENSMUST00000045262	ENSMUSP00000042785	TRANSLATION	protein_coding	-	CCDS38675.1	1	562	9	6.93	6.3	271.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000054091	1810037I17Rik	ENSMUST00000106429	ENSMUSP00000102037	TRANSLATION	protein_coding	-	CCDS38619.1	1	65	0	0	2.7	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000038092	Hsd3b5	ENSMUST00000044094	ENSMUSP00000041442	TRANSLATION	protein_coding	-	CCDS17666.1	1	373	27	1.54	1.5	345.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000068923	Syt11	ENSMUST00000107503	ENSMUSP00000103127	TRANSLATION	protein_coding	-	-	2	124	12	1.6	0	72.3	0	-4,-7	-	-	3.75	MINOR
ENSMUSG00000068923	Syt11	ENSMUST00000183267	ENSMUSP00000138284	TRANSLATION	protein_coding	start	-	2	363	22	3.3	0	153.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068923	Syt11	ENSMUST00000090945	ENSMUSP00000088464	TRANSLATION	protein_coding	-	CCDS38484.1	1	430	22	3.15	11.5	144	1	-4,-7	-	-	20.154	PRINCIPAL:1
ENSMUSG00000068923	Syt11	ENSMUST00000130869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068923	Syt11	ENSMUST00000107505	ENSMUSP00000103129	TRANSLATION	protein_coding	-	CCDS38484.1	1	430	22	3.15	11.5	144	1	-4,-7	-	-	20.154	PRINCIPAL:1
ENSMUSG00000033222	Ttf2	ENSMUST00000127357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033222	Ttf2	ENSMUST00000151697	ENSMUSP00000119032	TRANSLATION	protein_coding	start/stop	-	3	182	0	1.03	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033222	Ttf2	ENSMUST00000200506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033222	Ttf2	ENSMUST00000145811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033222	Ttf2	ENSMUST00000076941	ENSMUSP00000076208	TRANSLATION	protein_coding	-	CCDS17679.1	1	1138	6	6.38	0.5	321.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053965	Pde5a	ENSMUST00000066728	ENSMUSP00000069011	TRANSLATION	protein_coding	-	CCDS17812.1	1	865	15	18.5	3.9	360.9	0	-4,-6	-	-	19.116	MINOR
ENSMUSG00000053965	Pde5a	ENSMUST00000200389	ENSMUSP00000143042	TRANSLATION	protein_coding	-	-	5	833	15	18.198	8.8	360.9	0	-4,-5	-	-	20.394	PRINCIPAL:1
ENSMUSG00000053965	Pde5a	ENSMUST00000199253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053965	Pde5a	ENSMUST00000198314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074653	Lrrc31	ENSMUST00000108263	ENSMUSP00000103898	TRANSLATION	protein_coding	-	-	2	351	0	4.56	0	18.5	0	-4,-5	-	-	8.208	PRINCIPAL:1
ENSMUSG00000074653	Lrrc31	ENSMUST00000126658	ENSMUSP00000120802	TRANSLATION	protein_coding	stop	-	5	502	0	5.18	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074653	Lrrc31	ENSMUST00000130731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074653	Lrrc31	ENSMUST00000194840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044864	Ankrd50	ENSMUST00000127837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044864	Ankrd50	ENSMUST00000120875	ENSMUSP00000113349	TRANSLATION	protein_coding	-	CCDS50897.1	1	276	10	0	0.5	0	0	-4,-5	-	-	4.002	PRINCIPAL:1
ENSMUSG00000044864	Ankrd50	ENSMUST00000094300	ENSMUSP00000091858	TRANSLATION	protein_coding	-	-	1	467	0	0.2	0	98.3	0	-4,-5	-	-	1.5	MINOR
ENSMUSG00000044864	Ankrd50	ENSMUST00000156038	ENSMUSP00000122842	TRANSLATION	protein_coding	start	-	5	1390	13	0.8	0	337	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002233	Rhoc	ENSMUST00000176347	ENSMUSP00000135659	TRANSLATION	protein_coding	-	-	5	149	20	3.65	0	160.6	0	-4,-5	-	-	10.752	MINOR
ENSMUSG00000002233	Rhoc	ENSMUST00000106787	ENSMUSP00000102399	TRANSLATION	protein_coding	-	CCDS17704.1	2	193	23	5.25	21.5	194.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000002233	Rhoc	ENSMUST00000132721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002233	Rhoc	ENSMUST00000199824	ENSMUSP00000142855	TRANSLATION	protein_coding	stop	-	5	118	18	2.75	0	148.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002233	Rhoc	ENSMUST00000196817	ENSMUSP00000142697	TRANSLATION	protein_coding	-	CCDS17704.1	3	193	23	5.25	21.5	194.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000002233	Rhoc	ENSMUST00000002303	ENSMUSP00000002303	TRANSLATION	protein_coding	-	CCDS17704.1	1	193	23	5.25	21.5	194.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027716	Trpc3	ENSMUST00000029271	ENSMUSP00000029271	TRANSLATION	protein_coding	-	CCDS50893.1	1	910	0	1.04	0.5	229.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027716	Trpc3	ENSMUST00000123220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027716	Trpc3	ENSMUST00000129322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027716	Trpc3	ENSMUST00000146475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027716	Trpc3	ENSMUST00000133542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027606	Dnajc5b	ENSMUST00000165693	ENSMUSP00000127515	TRANSLATION	protein_coding	-	CCDS17257.1	3	199	0	2	7.5	92.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027606	Dnajc5b	ENSMUST00000029132	ENSMUSP00000029132	TRANSLATION	protein_coding	-	CCDS17257.1	1	199	0	2	7.5	92.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027606	Dnajc5b	ENSMUST00000118968	ENSMUSP00000112849	TRANSLATION	protein_coding	-	CCDS17257.1	2	199	0	2	7.5	92.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000027606	Dnajc5b	ENSMUST00000118735	ENSMUSP00000113414	TRANSLATION	protein_coding	-	CCDS17257.1	5	199	0	2	7.5	92.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000058921	Slc10a5	ENSMUST00000078748	ENSMUSP00000077808	TRANSLATION	protein_coding	-	CCDS17241.1	-	434	0	0.2	1.5	110.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034317	Trim59	ENSMUST00000107802	ENSMUSP00000103432	TRANSLATION	protein_coding	-	CCDS17402.1	1	403	16	0	7.5	76.3	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034317	Trim59	ENSMUST00000142560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034317	Trim59	ENSMUST00000136512	ENSMUSP00000120270	TRANSLATION	protein_coding	stop	-	1	389	16	0	0	76.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000034317	Trim59	ENSMUST00000153259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056306	Sertm1	ENSMUST00000162201	ENSMUSP00000124102	TRANSLATION	protein_coding	-	CCDS17355.1	1	107	0	0	14.8	184.6	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000056306	Sertm1	ENSMUST00000070342	ENSMUSP00000064870	TRANSLATION	protein_coding	-	CCDS17355.1	1	107	0	0	14.8	184.6	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000033386	Frrs1	ENSMUST00000197323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033386	Frrs1	ENSMUST00000195905	ENSMUSP00000143255	TRANSLATION	protein_coding	-	CCDS17792.1	5	592	0	1.12	1.5	181.2	7	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000033386	Frrs1	ENSMUST00000199030	ENSMUSP00000142793	TRANSLATION	protein_coding	start	-	3	123	0	0	0	0	3	-2,-2	-	-	-1	MINOR
ENSMUSG00000033386	Frrs1	ENSMUST00000199626	ENSMUSP00000143546	TRANSLATION	nonsense_mediated_decay	-	-	2	84	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000033386	Frrs1	ENSMUST00000199584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033386	Frrs1	ENSMUST00000040260	ENSMUSP00000039487	TRANSLATION	protein_coding	-	CCDS17792.1	1	592	0	1.12	1.5	181.2	7	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000045934	Mtmr11	ENSMUST00000129925	ENSMUSP00000118258	TRANSLATION	nonsense_mediated_decay	-	-	5	273	0	2.44	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045934	Mtmr11	ENSMUST00000152763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045934	Mtmr11	ENSMUST00000154955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045934	Mtmr11	ENSMUST00000196004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045934	Mtmr11	ENSMUST00000054356	ENSMUSP00000062341	TRANSLATION	protein_coding	-	CCDS51000.1	1	700	0	6.3786	2.7	270.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045934	Mtmr11	ENSMUST00000147245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045934	Mtmr11	ENSMUST00000123520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028136	Snx27	ENSMUST00000199462	ENSMUSP00000143378	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028136	Snx27	ENSMUST00000196251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028136	Snx27	ENSMUST00000029783	ENSMUSP00000029783	TRANSLATION	protein_coding	-	CCDS38538.1	1	526	0	8.217	3.9	168.7	0	-4,-5	-	-	13.116	MINOR
ENSMUSG00000028136	Snx27	ENSMUST00000196675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028136	Snx27	ENSMUST00000198426	ENSMUSP00000143525	TRANSLATION	nonsense_mediated_decay	start	-	3	110	0	2.146	0	70.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028136	Snx27	ENSMUST00000107283	ENSMUSP00000102904	TRANSLATION	protein_coding	-	CCDS38537.1	1	539	0	8.217	8.8	168.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028136	Snx27	ENSMUST00000198902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028136	Snx27	ENSMUST00000200642	ENSMUSP00000143066	TRANSLATION	protein_coding	-	-	5	435	0	6.417	0	112.7	0	-4,-7	-	-	5.04	MINOR
ENSMUSG00000095522	Aadacl2fm3	ENSMUST00000194941	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000095522	Aadacl2fm3	ENSMUST00000179799	ENSMUSP00000137307	TRANSLATION	protein_coding	-	CCDS57214.1	5	401	3	2.32	1.5	25.7	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058135	Gstm1	ENSMUST00000126593	ENSMUSP00000118874	TRANSLATION	protein_coding	-	-	3	244	10	6.125	0.5	124.5	0	-4,-7	-	-	17.022	MINOR
ENSMUSG00000058135	Gstm1	ENSMUST00000153314	ENSMUSP00000123481	TRANSLATION	protein_coding	start	-	5	194	4	3.96	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058135	Gstm1	ENSMUST00000198532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058135	Gstm1	ENSMUST00000004140	ENSMUSP00000004140	TRANSLATION	protein_coding	-	CCDS17747.1	1	218	10	6.5	6.3	128.3	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000042766	Trim46	ENSMUST00000090924	ENSMUSP00000088442	TRANSLATION	protein_coding	-	CCDS17498.1	1	541	12	2.78	1.5	71.8	0	-4,-5	-	-	18.188	MINOR
ENSMUSG00000042766	Trim46	ENSMUST00000125952	ENSMUSP00000123533	TRANSLATION	protein_coding	stop	-	3	37	6	1	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042766	Trim46	ENSMUST00000143637	ENSMUSP00000119270	TRANSLATION	nonsense_mediated_decay	-	-	5	447	12	2.78	0	71.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042766	Trim46	ENSMUST00000041022	ENSMUSP00000036053	TRANSLATION	protein_coding	-	CCDS17497.1	1	759	12	2.78	6.3	71.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042766	Trim46	ENSMUST00000107464	ENSMUSP00000103088	TRANSLATION	protein_coding	-	-	5	736	12	2.78	2.7	71.8	0	-4,-5	-	-	18.642	MINOR
ENSMUSG00000042766	Trim46	ENSMUST00000139419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000104445	Rhbg	ENSMUST00000171887	ENSMUSP00000130767	TRANSLATION	protein_coding	-	CCDS17466.1	1	455	5	8.59	1.5	241.4	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000044528	Tram1l1	ENSMUST00000058994	ENSMUSP00000062635	TRANSLATION	protein_coding	-	CCDS17819.1	-	363	0	0	1.5	136.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000081058	H3c15	ENSMUST00000167403	ENSMUSP00000135215	TRANSLATION	protein_coding	-	CCDS57240.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000103084	Gm38119	ENSMUST00000192027	ENSMUSP00000141812	TRANSLATION	protein_coding	-	-	5	146	0	0	0	28.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000074342	I830077J02Rik	ENSMUST00000098758	ENSMUSP00000096354	TRANSLATION	protein_coding	-	CCDS17713.1	1	132	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000074342	I830077J02Rik	ENSMUST00000196099	ENSMUSP00000142349	TRANSLATION	nonsense_mediated_decay	start	-	5	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074342	I830077J02Rik	ENSMUST00000126230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028194	Ddah1	ENSMUST00000029845	ENSMUSP00000029845	TRANSLATION	protein_coding	-	CCDS17896.1	1	285	15	5.75	13	0	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000028194	Ddah1	ENSMUST00000127193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028194	Ddah1	ENSMUST00000120310	ENSMUSP00000112747	TRANSLATION	protein_coding	-	-	1	182	10	4.75	9.6	0	0	-4,-5	-	-	9.534	MINOR
ENSMUSG00000092607	Scnm1	ENSMUST00000199730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092607	Scnm1	ENSMUST00000196728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092607	Scnm1	ENSMUST00000174859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092607	Scnm1	ENSMUST00000174835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092607	Scnm1	ENSMUST00000173527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092607	Scnm1	ENSMUST00000174508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092607	Scnm1	ENSMUST00000173462	ENSMUSP00000133769	TRANSLATION	protein_coding	-	CCDS50986.1	2	164	4	0	0.5	121	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000092607	Scnm1	ENSMUST00000172572	ENSMUSP00000134337	TRANSLATION	protein_coding	-	CCDS50987.1	1	186	4	0	0.5	56.2	0	-4,-5	-	-	6.112	MINOR
ENSMUSG00000028040	Efna4	ENSMUST00000029674	ENSMUSP00000029674	TRANSLATION	protein_coding	-	CCDS38489.1	1	206	0	2.52	0.5	130.5	0	1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000055865	Tafa3	ENSMUST00000162644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055865	Tafa3	ENSMUST00000139783	ENSMUSP00000123514	TRANSLATION	protein_coding	-	CCDS51032.1	1	132	0	0	6.3	161.2	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000027712	Anxa5	ENSMUST00000199478	ENSMUSP00000143650	TRANSLATION	protein_coding	stop	-	3	137	14	4	0	122.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027712	Anxa5	ENSMUST00000196097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027712	Anxa5	ENSMUST00000029266	ENSMUSP00000029266	TRANSLATION	protein_coding	-	CCDS38416.1	1	319	22	9.33	1.5	314.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000001	Gnai3	ENSMUST00000000001	ENSMUSP00000000001	TRANSLATION	protein_coding	-	CCDS17751.1	1	354	24	7.5	21.5	408.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047824	Pygo2	ENSMUST00000107413	ENSMUSP00000103036	TRANSLATION	protein_coding	-	CCDS38494.1	1	368	8	0.4	2.8	30.5	0	-4,-7	-	-	18.831	MINOR
ENSMUSG00000047824	Pygo2	ENSMUST00000125830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047824	Pygo2	ENSMUST00000133680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047824	Pygo2	ENSMUST00000146037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047824	Pygo2	ENSMUST00000136573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047824	Pygo2	ENSMUST00000060061	ENSMUSP00000053672	TRANSLATION	protein_coding	-	CCDS79952.1	1	405	8	0.4	7.5	30.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037016	Frem2	ENSMUST00000091137	ENSMUSP00000088670	TRANSLATION	protein_coding	-	CCDS17348.1	1	3160	4	4.8	1.5	1089.6	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000037016	Frem2	ENSMUST00000199543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037016	Frem2	ENSMUST00000199323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037016	Frem2	ENSMUST00000197519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002227	Mov10	ENSMUST00000196161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002227	Mov10	ENSMUST00000106774	ENSMUSP00000102386	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002227	Mov10	ENSMUST00000002297	ENSMUSP00000002297	TRANSLATION	protein_coding	-	-	5	1004	16	5.045	6.3	242.3	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000002227	Mov10	ENSMUST00000106775	ENSMUSP00000102387	TRANSLATION	protein_coding	-	-	5	1077	16	5.045	0.5	242.3	0	-4,-2	-	-	18	MINOR
ENSMUSG00000002227	Mov10	ENSMUST00000145414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002227	Mov10	ENSMUST00000168015	ENSMUSP00000128246	TRANSLATION	protein_coding	-	CCDS38579.1	1	1004	16	5.045	6.3	242.3	0	-4,-7	-	-	20	PRINCIPAL:2
ENSMUSG00000002227	Mov10	ENSMUST00000166979	ENSMUSP00000126897	TRANSLATION	protein_coding	-	CCDS51033.1	1	1077	16	5.045	0.5	242.3	0	-4,-2	-	-	18	MINOR
ENSMUSG00000002227	Mov10	ENSMUST00000136148	ENSMUSP00000120486	TRANSLATION	nonsense_mediated_decay	-	-	3	145	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002227	Mov10	ENSMUST00000196211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048652	Samd13	ENSMUST00000147113	ENSMUSP00000118934	TRANSLATION	protein_coding	-	-	5	102	0	1.44	11.5	35.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048652	Samd13	ENSMUST00000124931	ENSMUSP00000118464	TRANSLATION	protein_coding	-	-	5	102	0	1.44	11.5	35.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048652	Samd13	ENSMUST00000144837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048652	Samd13	ENSMUST00000125965	ENSMUSP00000119608	TRANSLATION	protein_coding	-	-	5	102	0	1.44	11.5	35.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048652	Samd13	ENSMUST00000197989	ENSMUSP00000143496	TRANSLATION	protein_coding	-	-	5	83	0	1.44	2	35.2	0	-4,-5	-	-	12.285	MINOR
ENSMUSG00000038619	Ensa	ENSMUST00000197050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038619	Ensa	ENSMUST00000058230	ENSMUSP00000051799	TRANSLATION	protein_coding	-	CCDS50993.1	1	121	1	0	8.8	35	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000038619	Ensa	ENSMUST00000037983	ENSMUSP00000045937	TRANSLATION	protein_coding	-	CCDS17617.1	1	117	1	0	8.8	35	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000038619	Ensa	ENSMUST00000199421	-	NO_TRANSLATION	TEC
ENSMUSG00000109293	Dcst2	ENSMUST00000208216	ENSMUSP00000146838	TRANSLATION	protein_coding	-	-	5	701	4	0	0.5	186.1	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000027956	Tmem144	ENSMUST00000194338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027956	Tmem144	ENSMUST00000168038	ENSMUSP00000127837	TRANSLATION	protein_coding	-	CCDS17421.1	1	348	0	0	1.5	460.7	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027956	Tmem144	ENSMUST00000029568	ENSMUSP00000029568	TRANSLATION	protein_coding	-	CCDS17421.1	1	348	0	0	1.5	460.7	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027956	Tmem144	ENSMUST00000192341	ENSMUSP00000142289	TRANSLATION	protein_coding	stop	-	5	35	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000027956	Tmem144	ENSMUST00000193410	ENSMUSP00000141832	TRANSLATION	protein_coding	stop	-	5	137	0	0	0	193	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000040969	Arhgef38	ENSMUST00000147041	ENSMUSP00000114238	TRANSLATION	protein_coding	-	-	5	770	0	7.834	0	268.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040969	Arhgef38	ENSMUST00000161022	ENSMUSP00000124280	TRANSLATION	protein_coding	-	CCDS17849.1	1	219	0	1.8	2.7	71.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040969	Arhgef38	ENSMUST00000161932	ENSMUSP00000124776	TRANSLATION	protein_coding	-	-	1	175	0	1.2	0	44.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040969	Arhgef38	ENSMUST00000054105	ENSMUSP00000054558	TRANSLATION	protein_coding	start	-	5	189	0	2.4	0	55.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038997	Asb17	ENSMUST00000198849	ENSMUSP00000142678	TRANSLATION	nonsense_mediated_decay	-	-	1	134	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038997	Asb17	ENSMUST00000044089	ENSMUSP00000041293	TRANSLATION	protein_coding	-	CCDS17922.1	1	295	0	0	7.5	31.4	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000027947	Il6ra	ENSMUST00000029559	ENSMUSP00000029559	TRANSLATION	protein_coding	-	CCDS38496.1	1	460	0	5.4	0.5	99.9	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000027947	Il6ra	ENSMUST00000197679	ENSMUSP00000143541	TRANSLATION	protein_coding	-	CCDS79954.1	1	459	0	5.4	0.5	99.9	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000042035	Igsf3	ENSMUST00000198995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042035	Igsf3	ENSMUST00000043983	ENSMUSP00000048900	TRANSLATION	protein_coding	-	CCDS17682.1	1	1194	0	1.14	2.9	160.2	1	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000042035	Igsf3	ENSMUST00000195164	ENSMUSP00000141823	TRANSLATION	protein_coding	-	-	5	1214	0	1.14	2.9	160.2	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027895	Kcnc4	ENSMUST00000009617	ENSMUSP00000009617	TRANSLATION	protein_coding	-	CCDS17738.1	1	628	0	1.16	3.9	299.3	3	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000027895	Kcnc4	ENSMUST00000238670	ENSMUSP00000158751	TRANSLATION	protein_coding	-	-	-	666	0	1.16	1.7	299.3	3	-4,-7	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000025758	Plk4	ENSMUST00000204032	ENSMUSP00000145201	TRANSLATION	protein_coding	start	-	3	157	0	3	0	37.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025758	Plk4	ENSMUST00000204289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025758	Plk4	ENSMUST00000205046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025758	Plk4	ENSMUST00000203895	ENSMUSP00000145455	TRANSLATION	nonsense_mediated_decay	-	-	1	146	16	3.53	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025758	Plk4	ENSMUST00000204594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025758	Plk4	ENSMUST00000203295	ENSMUSP00000145277	TRANSLATION	protein_coding	-	CCDS57210.1	1	898	19	13.26	0.5	278.4	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000025758	Plk4	ENSMUST00000203320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025758	Plk4	ENSMUST00000204473	ENSMUSP00000144693	TRANSLATION	protein_coding	stop	-	5	115	16	3.198	0	78.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025758	Plk4	ENSMUST00000167556	ENSMUSP00000126945	TRANSLATION	protein_coding	-	-	5	922	19	14.01	1.5	278.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025758	Plk4	ENSMUST00000026858	ENSMUSP00000026858	TRANSLATION	protein_coding	-	CCDS17328.1	1	925	19	14.01	0.5	278.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000027967	Neurog2	ENSMUST00000029587	ENSMUSP00000029587	TRANSLATION	protein_coding	-	CCDS17825.1	1	263	0	0.4	1.5	54.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037400	Atp11b	ENSMUST00000196700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037400	Atp11b	ENSMUST00000196965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037400	Atp11b	ENSMUST00000200445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037400	Atp11b	ENSMUST00000029257	ENSMUSP00000029257	TRANSLATION	protein_coding	-	CCDS38414.1	1	1175	6	5.15	1.7	417.2	17	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037400	Atp11b	ENSMUST00000211902	ENSMUSP00000148402	TRANSLATION	nonsense_mediated_decay	start	-	5	112	0	0	0	0	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000037400	Atp11b	ENSMUST00000197003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037400	Atp11b	ENSMUST00000197764	ENSMUSP00000142988	TRANSLATION	protein_coding	start	-	3	124	0	0	0	0	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000037400	Atp11b	ENSMUST00000196409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037400	Atp11b	ENSMUST00000199892	ENSMUSP00000142724	TRANSLATION	protein_coding	start/stop	-	3	259	1	0	0	40.1	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000037400	Atp11b	ENSMUST00000200351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037400	Atp11b	ENSMUST00000198599	ENSMUSP00000142676	TRANSLATION	protein_coding	start	-	5	967	5	5.15	0	306.7	15	-4,-5	-	-	-1	MINOR
ENSMUSG00000028085	Gatb	ENSMUST00000127348	ENSMUSP00000119949	TRANSLATION	protein_coding	-	CCDS17441.1	1	557	17	9.26	1.5	153	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028085	Gatb	ENSMUST00000134273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028085	Gatb	ENSMUST00000107674	ENSMUSP00000103301	TRANSLATION	protein_coding	-	-	1	553	17	8.66	0	115.9	0	-4,0	-	-	14.574	MINOR
ENSMUSG00000028085	Gatb	ENSMUST00000029726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028085	Gatb	ENSMUST00000107672	ENSMUSP00000103299	TRANSLATION	protein_coding	-	-	1	472	17	7.66	0	57.6	0	-4,0	-	-	9.078	MINOR
ENSMUSG00000027998	Plrg1	ENSMUST00000151915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027998	Plrg1	ENSMUST00000029628	ENSMUSP00000029628	TRANSLATION	nonsense_mediated_decay	-	-	1	383	0	10.41	0	116.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027998	Plrg1	ENSMUST00000150268	ENSMUSP00000114968	TRANSLATION	protein_coding	-	CCDS17433.1	1	513	0	13.24	6.3	137.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027998	Plrg1	ENSMUST00000122128	ENSMUSP00000113614	TRANSLATION	protein_coding	-	-	5	504	0	12.91	1.2	137.2	0	-4,-7	-	-	11.416	MINOR
ENSMUSG00000027998	Plrg1	ENSMUST00000135813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060256	Tdpoz4	ENSMUST00000075953	ENSMUSP00000075338	TRANSLATION	protein_coding	-	CCDS38528.1	-	370	0	1	0.5	100.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036834	Plch1	ENSMUST00000159188	ENSMUSP00000124491	TRANSLATION	protein_coding	stop	-	2	135	0	1.22	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036834	Plch1	ENSMUST00000161052	ENSMUSP00000125581	TRANSLATION	protein_coding	-	-	1	34	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000036834	Plch1	ENSMUST00000159676	ENSMUSP00000124632	TRANSLATION	protein_coding	-	CCDS50918.1	1	1073	14	10.68	0.5	465.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000160638	ENSMUSP00000123921	TRANSLATION	protein_coding	-	-	5	1073	14	10.68	0	465.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000159982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036834	Plch1	ENSMUST00000084105	ENSMUSP00000081122	TRANSLATION	protein_coding	-	CCDS38444.2	1	1682	14	10.68	0.5	465.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000036834	Plch1	ENSMUST00000059973	ENSMUSP00000058524	TRANSLATION	protein_coding	-	-	5	1681	14	10.68	0.5	465.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000162269	ENSMUSP00000124463	TRANSLATION	protein_coding	-	CCDS57215.1	1	1003	14	10.68	2.9	465.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000177143	ENSMUSP00000135424	TRANSLATION	protein_coding	-	-	5	1673	14	10.38	0.5	465.1	0	-4,-7	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000159374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036834	Plch1	ENSMUST00000048134	ENSMUSP00000047693	TRANSLATION	protein_coding	-	-	1	1643	14	10.38	0	465.1	0	-4,-7	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000036834	Plch1	ENSMUST00000175947	ENSMUSP00000135353	TRANSLATION	protein_coding	stop	-	5	968	14	10.38	0	465.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036834	Plch1	ENSMUST00000176861	ENSMUSP00000135562	TRANSLATION	protein_coding	start/stop	-	3	269	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056054	S100a8	ENSMUST00000198156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056054	S100a8	ENSMUST00000069927	ENSMUSP00000064385	TRANSLATION	protein_coding	-	CCDS38507.1	1	89	6	2	1.5	55.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001052	Sec24b	ENSMUST00000165873	ENSMUSP00000132861	TRANSLATION	protein_coding	start/stop	-	1	765	4	12	0	412.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001052	Sec24b	ENSMUST00000168675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001052	Sec24b	ENSMUST00000164758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001052	Sec24b	ENSMUST00000165889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001052	Sec24b	ENSMUST00000170163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001052	Sec24b	ENSMUST00000168644	ENSMUSP00000126923	TRANSLATION	protein_coding	start/stop	-	5	411	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001052	Sec24b	ENSMUST00000172324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001052	Sec24b	ENSMUST00000168908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001052	Sec24b	ENSMUST00000001079	ENSMUSP00000001079	TRANSLATION	protein_coding	-	CCDS17840.1	1	1251	4	18	0.5	548.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000027680	Fxr1	ENSMUST00000001620	ENSMUSP00000001620	TRANSLATION	protein_coding	-	CCDS50891.1	5	677	0	9	5.3	501	0	-4,-5	-	-	13.622	PRINCIPAL:1
ENSMUSG00000027680	Fxr1	ENSMUST00000198051	ENSMUSP00000142847	TRANSLATION	protein_coding	-	-	5	568	0	9	6.3	408.3	0	-4,-5	-	-	8.438	MINOR
ENSMUSG00000027680	Fxr1	ENSMUST00000167354	ENSMUSP00000130216	TRANSLATION	protein_coding	-	-	5	454	0	6.5	1.2	256.6	0	-4,-5	-	-	1.078	MINOR
ENSMUSG00000027680	Fxr1	ENSMUST00000196519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027680	Fxr1	ENSMUST00000197694	ENSMUSP00000142441	TRANSLATION	protein_coding	-	CCDS79896.1	5	621	0	9	6.3	405.4	0	-4,-5	-	-	8.264	MINOR
ENSMUSG00000027680	Fxr1	ENSMUST00000200425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027680	Fxr1	ENSMUST00000200392	ENSMUSP00000143392	TRANSLATION	protein_coding	-	CCDS50890.1	1	539	0	9	5.1	312.7	0	-4,-5	-	-	7.548	MINOR
ENSMUSG00000027680	Fxr1	ENSMUST00000197853	ENSMUSP00000143614	TRANSLATION	protein_coding	start	-	3	133	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027680	Fxr1	ENSMUST00000200086	ENSMUSP00000143562	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027855	Sycp1	ENSMUST00000029448	ENSMUSP00000029448	TRANSLATION	protein_coding	-	CCDS38567.1	1	993	0	3.95	0.5	1520.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027855	Sycp1	ENSMUST00000198651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027855	Sycp1	ENSMUST00000196988	ENSMUSP00000143651	TRANSLATION	protein_coding	-	CCDS38567.1	1	993	0	3.95	0.5	1520.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027855	Sycp1	ENSMUST00000199930	ENSMUSP00000143493	TRANSLATION	protein_coding	stop	-	3	182	0	0	0	179.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000118531	Tmigd3	ENSMUST00000196748	ENSMUSP00000143674	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	157	0	1.2	0	69.2	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000045328	Cenpe	ENSMUST00000199497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045328	Cenpe	ENSMUST00000197369	ENSMUSP00000143435	TRANSLATION	protein_coding	start/stop	-	3	194	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045328	Cenpe	ENSMUST00000197273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045328	Cenpe	ENSMUST00000200616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045328	Cenpe	ENSMUST00000062893	ENSMUSP00000057938	TRANSLATION	protein_coding	-	CCDS51072.1	5	2471	11	10	0.5	367.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043441	Gpr149	ENSMUST00000058535	ENSMUSP00000060893	TRANSLATION	protein_coding	-	CCDS17380.1	1	732	0	0	1.5	24.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043441	Gpr149	ENSMUST00000149007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028029	Aimp1	ENSMUST00000199638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028029	Aimp1	ENSMUST00000196206	ENSMUSP00000142914	TRANSLATION	protein_coding	stop	-	5	80	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028029	Aimp1	ENSMUST00000197646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028029	Aimp1	ENSMUST00000198513	ENSMUSP00000142513	TRANSLATION	protein_coding	-	-	3	310	0	6.532	0	107.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028029	Aimp1	ENSMUST00000200025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028029	Aimp1	ENSMUST00000029663	ENSMUSP00000029663	TRANSLATION	protein_coding	-	CCDS38642.1	1	319	0	6.532	0.5	107.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000028029	Aimp1	ENSMUST00000196963	ENSMUSP00000142365	TRANSLATION	protein_coding	stop	-	5	55	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028029	Aimp1	ENSMUST00000197793	ENSMUSP00000142534	TRANSLATION	protein_coding	stop	-	3	115	0	3.382	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052539	Magi3	ENSMUST00000064371	ENSMUSP00000067932	TRANSLATION	protein_coding	-	CCDS17699.1	1	1126	14	12.48	1.5	293.8	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000052539	Magi3	ENSMUST00000121198	ENSMUSP00000112934	TRANSLATION	protein_coding	-	CCDS51031.1	5	1476	14	12.48	0.5	293.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000052539	Magi3	ENSMUST00000122303	ENSMUSP00000113713	TRANSLATION	protein_coding	-	CCDS17699.1	1	1126	14	12.48	1.5	293.8	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000052539	Magi3	ENSMUST00000199201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034098	Fstl5	ENSMUST00000162471	ENSMUSP00000125688	TRANSLATION	protein_coding	start/stop	-	3	201	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034098	Fstl5	ENSMUST00000191664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034098	Fstl5	ENSMUST00000160261	ENSMUSP00000125393	TRANSLATION	protein_coding	-	CCDS38455.1	1	847	0	4.49	7.5	119	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000034098	Fstl5	ENSMUST00000159686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034098	Fstl5	ENSMUST00000038364	ENSMUSP00000038506	TRANSLATION	protein_coding	-	CCDS38455.1	1	847	0	4.49	7.5	119	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000001419	Mef2d	ENSMUST00000119251	ENSMUSP00000113638	TRANSLATION	protein_coding	-	-	5	506	0	1.5	2.7	35.6	0	-4,-6	-	-	8.928	MINOR
ENSMUSG00000001419	Mef2d	ENSMUST00000107558	ENSMUSP00000103183	TRANSLATION	protein_coding	-	CCDS79940.1	1	506	0	1.5	2.7	72.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001419	Mef2d	ENSMUST00000152861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001419	Mef2d	ENSMUST00000140927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001419	Mef2d	ENSMUST00000139153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001419	Mef2d	ENSMUST00000001455	ENSMUSP00000001455	TRANSLATION	protein_coding	-	CCDS38479.1	1	507	0	1.5	2.7	35.6	0	-4,-6	-	-	8.928	MINOR
ENSMUSG00000001419	Mef2d	ENSMUST00000107559	ENSMUSP00000103184	TRANSLATION	protein_coding	-	CCDS79939.1	1	514	0	1.5	2.7	35.6	0	-4,-6	-	-	8.928	MINOR
ENSMUSG00000043020	Wdr63	ENSMUST00000162572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043020	Wdr63	ENSMUST00000160285	ENSMUSP00000124475	TRANSLATION	protein_coding	-	CCDS17899.2	1	923	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000043020	Wdr63	ENSMUST00000161104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070360	Amy2a1	ENSMUST00000132353	ENSMUSP00000118962	TRANSLATION	protein_coding	stop	-	2	245	26	3.8	0	50.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000060671	Atp8b2	ENSMUST00000168880	ENSMUSP00000128726	TRANSLATION	protein_coding	stop	-	5	112	0	0	0	102.5	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000107396	ENSMUSP00000103019	TRANSLATION	protein_coding	-	-	5	1214	6	4.6578	0	462.3	20	-4,-6	-	-	18	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000170324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000069805	ENSMUSP00000063384	TRANSLATION	protein_coding	-	-	5	1209	6	4.6578	6.3	462.3	20	-4,-5	-	-	20.409	ALTERNATIVE:1
ENSMUSG00000060671	Atp8b2	ENSMUST00000170696	ENSMUSP00000126142	TRANSLATION	protein_coding	stop	-	3	128	1	0.68	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000166705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000167257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000170739	ENSMUSP00000127720	TRANSLATION	nonsense_mediated_decay	start	-	5	86	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000167442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000163354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000171422	ENSMUSP00000129641	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	53.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000166502	ENSMUSP00000132201	TRANSLATION	protein_coding	start	-	2	145	0	0	0	63.7	4	-1,-4	-	-	-1	MINOR
ENSMUSG00000060671	Atp8b2	ENSMUST00000166347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000163152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000168276	ENSMUSP00000128423	TRANSLATION	protein_coding	-	CCDS38497.2	5	1190	6	4.6578	7.6	462.3	20	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000060671	Atp8b2	ENSMUST00000171818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060671	Atp8b2	ENSMUST00000171941	ENSMUSP00000130545	TRANSLATION	protein_coding	start/stop	-	3	169	2	1.464	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033308	Dpyd	ENSMUST00000126254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033308	Dpyd	ENSMUST00000150950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033308	Dpyd	ENSMUST00000129148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033308	Dpyd	ENSMUST00000149101	ENSMUSP00000143022	TRANSLATION	protein_coding	-	-	3	78	0	2.25	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033308	Dpyd	ENSMUST00000039177	ENSMUSP00000039429	TRANSLATION	protein_coding	-	CCDS17797.1	1	1025	104	21.25	9.6	144	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033308	Dpyd	ENSMUST00000200178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039103	Nexn	ENSMUST00000046045	ENSMUSP00000037120	TRANSLATION	protein_coding	-	CCDS38673.1	1	607	0	0.8	0.5	56.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000039103	Nexn	ENSMUST00000196815	ENSMUSP00000142573	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000199685	ENSMUSP00000142569	TRANSLATION	protein_coding	stop	-	5	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000199423	ENSMUSP00000142936	TRANSLATION	protein_coding	-	-	1	671	0	0.8	1.5	56.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039103	Nexn	ENSMUST00000199983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039103	Nexn	ENSMUST00000196504	ENSMUSP00000143180	TRANSLATION	protein_coding	stop	-	2	169	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000196529	ENSMUSP00000143436	TRANSLATION	protein_coding	start	-	1	473	0	0.8	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000198734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039103	Nexn	ENSMUST00000198648	ENSMUSP00000143294	TRANSLATION	protein_coding	stop	-	1	175	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000198750	ENSMUSP00000142574	TRANSLATION	protein_coding	stop	-	5	272	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000200589	ENSMUSP00000142559	TRANSLATION	protein_coding	stop	-	5	354	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039103	Nexn	ENSMUST00000198404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039103	Nexn	ENSMUST00000198460	ENSMUSP00000143573	TRANSLATION	protein_coding	-	-	5	593	0	0.8	0	56.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039103	Nexn	ENSMUST00000197282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039103	Nexn	ENSMUST00000199752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039103	Nexn	ENSMUST00000199470	ENSMUSP00000143133	TRANSLATION	protein_coding	-	-	5	536	0	0.8	1.2	56.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039131	Gipc2	ENSMUST00000197813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039131	Gipc2	ENSMUST00000133102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039131	Gipc2	ENSMUST00000152283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039131	Gipc2	ENSMUST00000128741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039131	Gipc2	ENSMUST00000200501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039131	Gipc2	ENSMUST00000133672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039131	Gipc2	ENSMUST00000152680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039131	Gipc2	ENSMUST00000046614	ENSMUSP00000037328	TRANSLATION	protein_coding	-	CCDS17914.1	1	314	0	2	1.5	37.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039131	Gipc2	ENSMUST00000130196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028031	Dkk2	ENSMUST00000029665	ENSMUSP00000029665	TRANSLATION	protein_coding	-	CCDS17844.1	1	259	0	1.2	8.8	60.8	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000063689	H2ac21	ENSMUST00000073115	ENSMUSP00000072858	TRANSLATION	protein_coding	-	CCDS38553.1	-	130	0	1	11	136.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000041263	Rusc1	ENSMUST00000166687	ENSMUSP00000130477	TRANSLATION	protein_coding	-	CCDS50956.1	1	431	0	6.4	1.5	109.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041263	Rusc1	ENSMUST00000196043	ENSMUSP00000142622	TRANSLATION	protein_coding	stop	-	5	79	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041263	Rusc1	ENSMUST00000200357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041263	Rusc1	ENSMUST00000090929	ENSMUSP00000088447	TRANSLATION	protein_coding	-	CCDS38486.1	1	1030	0	6.4	1.5	109.5	0	-4,-2	-	-	12	PRINCIPAL:4
ENSMUSG00000041263	Rusc1	ENSMUST00000052539	ENSMUSP00000056640	TRANSLATION	protein_coding	-	CCDS38485.1	1	893	0	6.4	1.5	109.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000041263	Rusc1	ENSMUST00000196223	ENSMUSP00000143662	TRANSLATION	protein_coding	stop	-	2	167	0	5	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041263	Rusc1	ENSMUST00000198506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027933	Ints3	ENSMUST00000071488	ENSMUSP00000071422	TRANSLATION	protein_coding	-	CCDS17528.1	1	1041	0	12.55	1.5	355.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027933	Ints3	ENSMUST00000199992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027933	Ints3	ENSMUST00000198776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027933	Ints3	ENSMUST00000029542	ENSMUSP00000029542	TRANSLATION	protein_coding	-	CCDS17528.1	1	1041	0	12.55	1.5	355.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000027933	Ints3	ENSMUST00000196530	ENSMUSP00000143196	TRANSLATION	protein_coding	-	-	1	1035	0	12.55	0	355.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027933	Ints3	ENSMUST00000198562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027933	Ints3	ENSMUST00000199158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037152	Ndufc1	ENSMUST00000193279	ENSMUSP00000141933	TRANSLATION	protein_coding	-	CCDS38426.1	3	76	0	2.25	5.3	105	1	-3,0	-	-	14	PRINCIPAL:1
ENSMUSG00000037152	Ndufc1	ENSMUST00000145572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037152	Ndufc1	ENSMUST00000135602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037152	Ndufc1	ENSMUST00000038108	ENSMUSP00000038463	TRANSLATION	protein_coding	-	CCDS38426.1	1	76	0	2.25	5.3	105	1	-3,0	-	-	14	PRINCIPAL:1
ENSMUSG00000028080	Lrba	ENSMUST00000212390	ENSMUSP00000148618	TRANSLATION	protein_coding	stop	-	5	2124	0	1	0	667.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028080	Lrba	ENSMUST00000195524	ENSMUSP00000141734	TRANSLATION	protein_coding	-	-	1	758	0	11.88	0	498.2	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000028080	Lrba	ENSMUST00000192145	ENSMUSP00000142179	TRANSLATION	protein_coding	-	CCDS79934.1	1	2577	0	10.24	0.5	1196.8	0	-4,-5	-	-	5.952	MINOR
ENSMUSG00000028080	Lrba	ENSMUST00000195398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028080	Lrba	ENSMUST00000194759	ENSMUSP00000142043	TRANSLATION	protein_coding	-	CCDS79933.1	1	2790	0	11.92	0.5	1209.6	0	-4,-5	-	-	10.08	MINOR
ENSMUSG00000028080	Lrba	ENSMUST00000194674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028080	Lrba	ENSMUST00000195966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028080	Lrba	ENSMUST00000107635	ENSMUSP00000103261	TRANSLATION	protein_coding	-	CCDS38470.1	1	2854	0	12.88	0.5	1209.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000007379	Dennd2c	ENSMUST00000172288	ENSMUSP00000127187	TRANSLATION	protein_coding	-	CCDS38572.2	1	920	0	3.205	1.5	294.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000007379	Dennd2c	ENSMUST00000173206	ENSMUSP00000134008	TRANSLATION	protein_coding	-	-	5	863	0	3.205	0	294.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000007379	Dennd2c	ENSMUST00000173037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007379	Dennd2c	ENSMUST00000174060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007379	Dennd2c	ENSMUST00000174486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007379	Dennd2c	ENSMUST00000166143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033439	Trmt13	ENSMUST00000197190	ENSMUSP00000143637	TRANSLATION	protein_coding	start/stop	-	5	179	13	0	0	67.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033439	Trmt13	ENSMUST00000199439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033439	Trmt13	ENSMUST00000183638	ENSMUSP00000139223	TRANSLATION	nonsense_mediated_decay	-	-	5	176	7	0	0	93.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033439	Trmt13	ENSMUST00000198103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033439	Trmt13	ENSMUST00000198454	ENSMUSP00000142410	TRANSLATION	protein_coding	-	-	-	145	3	0	0	53	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033439	Trmt13	ENSMUST00000156161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033439	Trmt13	ENSMUST00000126546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033439	Trmt13	ENSMUST00000124807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033439	Trmt13	ENSMUST00000184963	ENSMUSP00000138868	TRANSLATION	nonsense_mediated_decay	-	-	1	292	21	0	0	228.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033439	Trmt13	ENSMUST00000041524	ENSMUSP00000047320	TRANSLATION	protein_coding	-	CCDS38612.1	1	481	21	0	2.9	407.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033439	Trmt13	ENSMUST00000134761	ENSMUSP00000138761	TRANSLATION	nonsense_mediated_decay	start	-	5	64	5	0	0	40.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008730	Hipk1	ENSMUST00000106845	ENSMUSP00000102458	TRANSLATION	protein_coding	-	CCDS79992.1	1	1165	18	2.74	0.5	172.1	0	-4,-7	-	-	18	MINOR
ENSMUSG00000008730	Hipk1	ENSMUST00000135634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008730	Hipk1	ENSMUST00000118317	ENSMUSP00000113998	TRANSLATION	protein_coding	-	CCDS38576.1	1	1210	18	2.74	8.8	172.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000008730	Hipk1	ENSMUST00000137078	ENSMUSP00000120396	TRANSLATION	nonsense_mediated_decay	-	-	1	719	18	2.74	0	172.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008730	Hipk1	ENSMUST00000200071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008730	Hipk1	ENSMUST00000029438	ENSMUSP00000029438	TRANSLATION	protein_coding	-	CCDS38576.1	1	1210	18	2.74	8.8	172.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000008730	Hipk1	ENSMUST00000126351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068762	Gstm6	ENSMUST00000155926	ENSMUSP00000139500	TRANSLATION	nonsense_mediated_decay	-	-	3	52	7	1.5	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068762	Gstm6	ENSMUST00000106683	ENSMUSP00000102294	TRANSLATION	protein_coding	-	-	3	123	2	3.5	0	60.8	0	-4,-5	-	-	2.202	MINOR
ENSMUSG00000068762	Gstm6	ENSMUST00000106684	ENSMUSP00000102295	TRANSLATION	protein_coding	-	-	1	232	10	6.8	0	131.7	0	-4,-6	-	-	17.79	MINOR
ENSMUSG00000068762	Gstm6	ENSMUST00000106681	ENSMUSP00000102292	TRANSLATION	protein_coding	stop	-	2	154	7	4.5	0	103.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068762	Gstm6	ENSMUST00000106680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068762	Gstm6	ENSMUST00000106685	ENSMUSP00000102296	TRANSLATION	protein_coding	-	CCDS38596.1	1	218	10	6.5	8.3	135.2	0	-4,-6	-	-	20.4	PRINCIPAL:1
ENSMUSG00000045475	Lce3c	ENSMUST00000055375	ENSMUSP00000050666	TRANSLATION	protein_coding	-	CCDS38521.1	1	98	0	0	1.5	104	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027968	Larp7	ENSMUST00000197668	ENSMUSP00000143331	TRANSLATION	protein_coding	stop	-	3	80	0	1.5	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027968	Larp7	ENSMUST00000029588	ENSMUSP00000029588	TRANSLATION	protein_coding	-	CCDS38626.1	5	570	0	8.05	1.5	237.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027968	Larp7	ENSMUST00000197698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027968	Larp7	ENSMUST00000195976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046676	Lce1l	ENSMUST00000054426	ENSMUSP00000057762	TRANSLATION	protein_coding	-	CCDS38518.1	1	135	0	0	0.5	28.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010136	Pifo	ENSMUST00000010280	ENSMUSP00000010280	TRANSLATION	protein_coding	-	CCDS51038.1	1	246	0	0	1.5	18	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000010136	Pifo	ENSMUST00000066319	ENSMUSP00000069454	TRANSLATION	protein_coding	-	CCDS51037.1	1	207	0	0	1.5	18	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090314	2310050C09Rik	ENSMUST00000163439	ENSMUSP00000126921	TRANSLATION	protein_coding	-	CCDS50977.1	2	280	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027703	Lrriq4	ENSMUST00000172350	ENSMUSP00000127052	TRANSLATION	protein_coding	-	CCDS38406.1	5	596	0	3.3	0.5	150.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000027703	Lrriq4	ENSMUST00000108265	ENSMUSP00000103900	TRANSLATION	protein_coding	-	CCDS71229.1	1	581	0	3	0.5	150.6	0	-4,-6	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000027703	Lrriq4	ENSMUST00000108267	ENSMUSP00000103902	TRANSLATION	protein_coding	-	CCDS38406.1	1	596	0	3.3	0.5	150.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000034544	Rsrc1	ENSMUST00000162362	ENSMUSP00000123699	TRANSLATION	protein_coding	stop	-	5	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034544	Rsrc1	ENSMUST00000161726	ENSMUSP00000124347	TRANSLATION	protein_coding	-	CCDS17394.1	1	334	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000065047	ENSMUSP00000066967	TRANSLATION	protein_coding	-	-	1	213	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000162620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034544	Rsrc1	ENSMUST00000046542	ENSMUSP00000047077	TRANSLATION	protein_coding	-	-	1	292	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000065074	ENSMUSP00000066797	TRANSLATION	protein_coding	-	CCDS17394.1	1	334	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000182708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034544	Rsrc1	ENSMUST00000162036	ENSMUSP00000125468	TRANSLATION	protein_coding	-	CCDS17394.1	5	334	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000162693	ENSMUSP00000125547	TRANSLATION	protein_coding	-	-	1	281	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034544	Rsrc1	ENSMUST00000160504	ENSMUSP00000124925	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068860	Gm128	ENSMUST00000107197	ENSMUSP00000102815	TRANSLATION	protein_coding	-	-	2	189	0	0	0	93.7	0	3,-2	-	-	0	MINOR
ENSMUSG00000068860	Gm128	ENSMUST00000090815	ENSMUSP00000088324	TRANSLATION	protein_coding	-	CCDS17608.1	1	350	0	0	0.5	468.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027824	Vmn2r1	ENSMUST00000029406	ENSMUSP00000029406	TRANSLATION	protein_coding	-	CCDS17384.1	1	912	7	3.78	1.5	539.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000056260	Lrif1	ENSMUST00000150888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056260	Lrif1	ENSMUST00000098750	ENSMUSP00000096346	TRANSLATION	protein_coding	-	CCDS17726.1	5	755	0	0	0.5	960.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056260	Lrif1	ENSMUST00000122928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056260	Lrif1	ENSMUST00000106737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056260	Lrif1	ENSMUST00000098751	ENSMUSP00000096347	TRANSLATION	protein_coding	-	CCDS38586.1	2	257	0	0	0.5	249.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000056260	Lrif1	ENSMUST00000127003	ENSMUSP00000114163	TRANSLATION	nonsense_mediated_decay	-	-	1	539	0	0	0.5	685.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056260	Lrif1	ENSMUST00000130105	ENSMUSP00000115110	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	267.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056260	Lrif1	ENSMUST00000156544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056260	Lrif1	ENSMUST00000150513	ENSMUSP00000119815	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	191.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056260	Lrif1	ENSMUST00000106736	ENSMUSP00000102347	TRANSLATION	protein_coding	-	CCDS17727.1	1	237	0	0	0.5	242.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056260	Lrif1	ENSMUST00000131330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056260	Lrif1	ENSMUST00000154973	ENSMUSP00000120350	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	186.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000029772	ENSMUSP00000029772	TRANSLATION	protein_coding	-	CCDS17598.1	1	658	0	3.91	0.5	442	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005774	Rfx5	ENSMUST00000107254	ENSMUSP00000102875	TRANSLATION	protein_coding	-	-	1	303	0	3.91	0	101.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000152869	ENSMUSP00000121157	TRANSLATION	protein_coding	stop	-	5	90	0	2.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000148803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005774	Rfx5	ENSMUST00000142311	ENSMUSP00000119704	TRANSLATION	protein_coding	stop	-	3	131	0	2.71	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000132393	ENSMUSP00000117999	TRANSLATION	protein_coding	stop	-	5	95	0	2.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000140331	ENSMUSP00000118014	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000145472	ENSMUSP00000116675	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000107253	ENSMUSP00000102874	TRANSLATION	protein_coding	-	-	1	303	0	3.91	0	101.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000142708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005774	Rfx5	ENSMUST00000147237	ENSMUSP00000118586	TRANSLATION	protein_coding	stop	-	5	181	0	3.91	0	101.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000107260	ENSMUSP00000102881	TRANSLATION	protein_coding	-	CCDS17598.1	5	658	0	3.91	0.5	442	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005774	Rfx5	ENSMUST00000137088	ENSMUSP00000117963	TRANSLATION	protein_coding	-	CCDS17598.1	5	658	0	3.91	0.5	442	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005774	Rfx5	ENSMUST00000107255	ENSMUSP00000102876	TRANSLATION	protein_coding	-	CCDS17598.1	5	658	0	3.91	0.5	442	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005774	Rfx5	ENSMUST00000140294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005774	Rfx5	ENSMUST00000144132	ENSMUSP00000114908	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005774	Rfx5	ENSMUST00000145031	ENSMUSP00000118099	TRANSLATION	protein_coding	stop	-	5	105	0	2.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028124	Gclm	ENSMUST00000176761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028124	Gclm	ENSMUST00000176445	ENSMUSP00000134906	TRANSLATION	protein_coding	start	-	2	199	0	1.83	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028124	Gclm	ENSMUST00000149983	ENSMUSP00000123683	TRANSLATION	protein_coding	start	-	5	153	0	1.23	0	21.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028124	Gclm	ENSMUST00000199699	ENSMUSP00000142381	TRANSLATION	protein_coding	start/stop	-	5	98	0	0.15	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028124	Gclm	ENSMUST00000137540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028124	Gclm	ENSMUST00000029769	ENSMUSP00000029769	TRANSLATION	protein_coding	-	CCDS17808.1	1	274	0	1.98	11.6	25.9	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000028124	Gclm	ENSMUST00000178826	ENSMUSP00000136987	TRANSLATION	protein_coding	-	CCDS17808.1	5	274	0	1.98	11.6	25.9	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000027720	Il2	ENSMUST00000029275	ENSMUSP00000029275	TRANSLATION	protein_coding	-	CCDS17316.1	1	169	0	3.39	0.5	246.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046999	1110032F04Rik	ENSMUST00000054551	ENSMUSP00000056782	TRANSLATION	protein_coding	-	CCDS50931.1	-	247	0	0	2.7	382.5	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000096569	Amy2a2	ENSMUST00000098667	ENSMUSP00000096264	TRANSLATION	protein_coding	-	CCDS51056.1	1	508	48	9.8	8.8	118.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000004892	Bcan	ENSMUST00000192274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004892	Bcan	ENSMUST00000194596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004892	Bcan	ENSMUST00000194193	ENSMUSP00000141455	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000004892	Bcan	ENSMUST00000193276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004892	Bcan	ENSMUST00000191627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004892	Bcan	ENSMUST00000090971	ENSMUSP00000088491	TRANSLATION	protein_coding	-	CCDS17462.1	1	883	9	2.75	1.5	349.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000027881	Prpf38b	ENSMUST00000029480	ENSMUSP00000029480	TRANSLATION	protein_coding	-	CCDS17770.1	1	542	0	0	1.5	195.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027881	Prpf38b	ENSMUST00000197805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027881	Prpf38b	ENSMUST00000125208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027881	Prpf38b	ENSMUST00000129273	ENSMUSP00000143724	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	48.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027881	Prpf38b	ENSMUST00000145720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027881	Prpf38b	ENSMUST00000199735	ENSMUSP00000142929	TRANSLATION	nonsense_mediated_decay	-	-	5	182	0	0	0	65.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027881	Prpf38b	ENSMUST00000156808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027881	Prpf38b	ENSMUST00000127478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033752	Mnd1	ENSMUST00000047368	ENSMUSP00000048262	TRANSLATION	protein_coding	-	CCDS38464.1	1	205	0	4.23	11.5	241.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034349	Smc4	ENSMUST00000194693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034349	Smc4	ENSMUST00000195525	ENSMUSP00000141779	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034349	Smc4	ENSMUST00000107803	ENSMUSP00000103433	TRANSLATION	protein_coding	-	-	5	1261	7	13.51	1.2	298	0	-4,-6	-	-	18.093	MINOR
ENSMUSG00000034349	Smc4	ENSMUST00000124983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034349	Smc4	ENSMUST00000148385	ENSMUSP00000123350	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034349	Smc4	ENSMUST00000136502	ENSMUSP00000115033	TRANSLATION	protein_coding	stop	-	1	337	7	3.68	0	135.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034349	Smc4	ENSMUST00000042901	ENSMUSP00000047872	TRANSLATION	protein_coding	-	CCDS17401.1	1	1286	7	13.51	7.5	298	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000034349	Smc4	ENSMUST00000149174	ENSMUSP00000142192	TRANSLATION	nonsense_mediated_decay	start	-	3	109	0	2	0	51.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034349	Smc4	ENSMUST00000128118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034349	Smc4	ENSMUST00000156354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034349	Smc4	ENSMUST00000128134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028179	Cth	ENSMUST00000129805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028179	Cth	ENSMUST00000118539	ENSMUSP00000113672	TRANSLATION	protein_coding	-	CCDS51101.1	1	398	14	9.75	4	514.3	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000028179	Cth	ENSMUST00000125028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028179	Cth	ENSMUST00000198009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045566	Sprr4	ENSMUST00000062129	ENSMUSP00000051559	TRANSLATION	protein_coding	-	CCDS38513.1	-	76	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000056947	Mab21l1	ENSMUST00000075422	ENSMUSP00000074878	TRANSLATION	protein_coding	-	CCDS17360.1	-	359	0	1	21.5	331.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027699	Ect2	ENSMUST00000176535	ENSMUSP00000135630	TRANSLATION	protein_coding	stop	-	2	188	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000184113	ENSMUSP00000139341	TRANSLATION	nonsense_mediated_decay	-	-	2	133	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000175857	ENSMUSP00000135208	TRANSLATION	protein_coding	stop	-	5	167	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000150061	ENSMUSP00000135617	TRANSLATION	nonsense_mediated_decay	start	-	3	80	4	0.1848	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000176780	ENSMUSP00000134786	TRANSLATION	protein_coding	stop	-	3	174	0	3.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000176242	ENSMUSP00000135740	TRANSLATION	protein_coding	-	CCDS50875.1	5	882	0	13.3248	7.3	248.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027699	Ect2	ENSMUST00000176908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027699	Ect2	ENSMUST00000124727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027699	Ect2	ENSMUST00000108296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027699	Ect2	ENSMUST00000108300	ENSMUSP00000103935	TRANSLATION	protein_coding	-	CCDS17270.2	1	913	0	12.8248	6.3	248.6	0	-4,-5	-	-	13.521	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000196926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027699	Ect2	ENSMUST00000177055	ENSMUSP00000134744	TRANSLATION	protein_coding	stop	-	3	181	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027699	Ect2	ENSMUST00000108298	ENSMUSP00000103933	TRANSLATION	protein_coding	-	CCDS50875.1	1	882	0	13.3248	7.3	248.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027796	Smad9	ENSMUST00000029371	ENSMUSP00000029371	TRANSLATION	protein_coding	-	CCDS17354.1	1	430	4	4.2	8.8	393.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000047819	Tigd4	ENSMUST00000062623	ENSMUSP00000052320	TRANSLATION	protein_coding	-	CCDS17439.1	-	513	0	0	1.5	235.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023087	Noct	ENSMUST00000023849	ENSMUSP00000023849	TRANSLATION	protein_coding	-	CCDS17336.1	1	429	7	1.36	2.7	84.1	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000023087	Noct	ENSMUST00000144826	ENSMUSP00000141416	TRANSLATION	protein_coding	-	-	1	365	7	1.36	2.4	84.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000023087	Noct	ENSMUST00000167780	ENSMUSP00000130347	TRANSLATION	protein_coding	-	CCDS17336.1	5	429	7	1.36	2.7	84.1	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000023087	Noct	ENSMUST00000193018	ENSMUSP00000142216	TRANSLATION	protein_coding	stop	-	2	117	1	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041912	Tdrkh	ENSMUST00000045245	ENSMUSP00000041002	TRANSLATION	protein_coding	-	CCDS38534.1	1	560	0	8.89	5.1	223.3	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000041912	Tdrkh	ENSMUST00000197495	ENSMUSP00000143135	TRANSLATION	protein_coding	-	-	5	515	0	7.56	1.2	152.3	2	-4,-7	-	-	5.18	MINOR
ENSMUSG00000041912	Tdrkh	ENSMUST00000197876	ENSMUSP00000142779	TRANSLATION	nonsense_mediated_decay	-	-	2	50	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000041912	Tdrkh	ENSMUST00000197901	ENSMUSP00000142561	TRANSLATION	protein_coding	-	CCDS38534.1	5	560	0	8.89	5.1	223.3	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000041912	Tdrkh	ENSMUST00000166032	ENSMUSP00000129635	TRANSLATION	protein_coding	-	CCDS38534.1	1	560	0	8.89	5.1	223.3	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000041912	Tdrkh	ENSMUST00000196606	ENSMUSP00000143102	TRANSLATION	protein_coding	-	-	5	556	0	8.89	3.9	203.3	2	-4,-7	-	-	12.214	MINOR
ENSMUSG00000041912	Tdrkh	ENSMUST00000196386	ENSMUSP00000143256	TRANSLATION	protein_coding	-	-	1	140	0	1.36	0	53.8	2	-4,-7	-	-	0	MINOR
ENSMUSG00000041912	Tdrkh	ENSMUST00000200486	ENSMUSP00000142584	TRANSLATION	protein_coding	-	-	3	296	0	4.14	1.2	121.6	2	-4,-7	-	-	0.098	MINOR
ENSMUSG00000027971	Ndst4	ENSMUST00000147016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027971	Ndst4	ENSMUST00000174648	ENSMUSP00000133575	TRANSLATION	protein_coding	-	-	1	364	18	8.55	0	143.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027971	Ndst4	ENSMUST00000172632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027971	Ndst4	ENSMUST00000173932	ENSMUSP00000133341	TRANSLATION	protein_coding	-	CCDS17820.1	5	872	18	8.55	8.8	952.2	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027971	Ndst4	ENSMUST00000144344	ENSMUSP00000120687	TRANSLATION	protein_coding	start	-	5	205	0	0	0	371	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027971	Ndst4	ENSMUST00000198101	ENSMUSP00000142414	TRANSLATION	protein_coding	start/stop	-	3	157	4	3	0	77.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008958	Vps72	ENSMUST00000139296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008958	Vps72	ENSMUST00000125548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008958	Vps72	ENSMUST00000009102	ENSMUSP00000009102	TRANSLATION	protein_coding	-	CCDS38543.1	1	368	0	2	0.5	227.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000008958	Vps72	ENSMUST00000136076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008958	Vps72	ENSMUST00000152333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019232	Etnppl	ENSMUST00000072271	ENSMUSP00000072121	TRANSLATION	protein_coding	-	CCDS38638.1	1	499	12	9.6	3.9	299.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000019232	Etnppl	ENSMUST00000170664	ENSMUSP00000128425	TRANSLATION	protein_coding	start	-	2	122	5	2.09	0	93.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019232	Etnppl	ENSMUST00000163620	ENSMUSP00000129120	TRANSLATION	protein_coding	-	-	5	493	12	9.27	1.2	272.7	0	-4,-5	-	-	15.819	MINOR
ENSMUSG00000019232	Etnppl	ENSMUST00000199940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019232	Etnppl	ENSMUST00000166187	ENSMUSP00000131294	TRANSLATION	protein_coding	-	CCDS38638.1	1	499	12	9.6	3.9	299.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000019232	Etnppl	ENSMUST00000172432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000047110	ENSMUSP00000035388	TRANSLATION	protein_coding	-	-	5	192	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000178485	ENSMUSP00000136984	TRANSLATION	protein_coding	-	-	1	99	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000180162	ENSMUSP00000137342	TRANSLATION	protein_coding	-	-	5	160	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000180033	ENSMUSP00000136217	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000177772	ENSMUSP00000136525	TRANSLATION	protein_coding	start	-	5	57	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000039174	1700003H04Rik	ENSMUST00000178953	ENSMUSP00000136955	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004885	Crabp2	ENSMUST00000005019	ENSMUSP00000005019	TRANSLATION	protein_coding	-	CCDS17460.1	1	138	20	3.25	19.5	86.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004885	Crabp2	ENSMUST00000163040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028028	Alpk1	ENSMUST00000160586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028028	Alpk1	ENSMUST00000159720	ENSMUSP00000123885	TRANSLATION	protein_coding	start/stop	-	3	183	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028028	Alpk1	ENSMUST00000198955	ENSMUSP00000143223	TRANSLATION	protein_coding	-	CCDS51067.1	5	1231	22	1.76	1.5	140.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028028	Alpk1	ENSMUST00000161239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028028	Alpk1	ENSMUST00000029662	ENSMUSP00000029662	TRANSLATION	protein_coding	-	CCDS51067.1	5	1231	22	1.76	1.5	140.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028028	Alpk1	ENSMUST00000162859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090441	Gm17651	ENSMUST00000166227	ENSMUSP00000127744	TRANSLATION	protein_coding	start/stop	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000028128	F3	ENSMUST00000029771	ENSMUSP00000029771	TRANSLATION	protein_coding	-	CCDS17805.1	1	294	0	4	0.5	163	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028128	F3	ENSMUST00000197731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028128	F3	ENSMUST00000199997	ENSMUSP00000143678	TRANSLATION	protein_coding	start	-	5	157	0	1	0	40.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028128	F3	ENSMUST00000196746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028187	Rpf1	ENSMUST00000199174	ENSMUSP00000142765	TRANSLATION	protein_coding	start	-	2	147	0	1.96	0	78	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028187	Rpf1	ENSMUST00000029838	ENSMUSP00000029838	TRANSLATION	protein_coding	-	CCDS51089.1	1	349	0	3.58	5.1	93.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028187	Rpf1	ENSMUST00000200583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028187	Rpf1	ENSMUST00000199079	ENSMUSP00000143279	TRANSLATION	protein_coding	-	CCDS80049.1	1	212	0	1.32	0.5	0	0	-4,-5	-	-	1.482	MINOR
ENSMUSG00000028187	Rpf1	ENSMUST00000196909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058388	Phtf1	ENSMUST00000117150	ENSMUSP00000113973	TRANSLATION	protein_coding	-	CCDS17698.1	1	761	0	0	7.5	232.6	9	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000058388	Phtf1	ENSMUST00000145727	ENSMUSP00000114722	TRANSLATION	nonsense_mediated_decay	-	-	1	761	0	0	7.5	232.6	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000058388	Phtf1	ENSMUST00000055425	ENSMUSP00000058137	TRANSLATION	protein_coding	-	CCDS51030.1	1	708	0	0	2.9	86.2	7	-4,-5	-	-	0.876	MINOR
ENSMUSG00000058388	Phtf1	ENSMUST00000063717	ENSMUSP00000066607	TRANSLATION	protein_coding	-	CCDS17698.1	1	761	0	0	7.5	232.6	9	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000058388	Phtf1	ENSMUST00000150849	ENSMUSP00000118281	TRANSLATION	nonsense_mediated_decay	-	-	5	233	0	0	0	232.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000058388	Phtf1	ENSMUST00000090685	ENSMUSP00000088184	TRANSLATION	protein_coding	-	CCDS51029.1	1	716	0	0	5.1	232.6	9	-4,-5	-	-	7.893	MINOR
ENSMUSG00000058388	Phtf1	ENSMUST00000156262	ENSMUSP00000121036	TRANSLATION	protein_coding	stop	-	5	154	0	0	0	86.2	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000058388	Phtf1	ENSMUST00000130385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058388	Phtf1	ENSMUST00000150090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058388	Phtf1	ENSMUST00000123611	ENSMUSP00000116193	TRANSLATION	protein_coding	stop	-	5	272	0	0	0	169.3	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000015745	Plekho1	ENSMUST00000015889	ENSMUSP00000015889	TRANSLATION	protein_coding	-	CCDS17627.1	1	408	0	1.37	6.3	49.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015745	Plekho1	ENSMUST00000143485	ENSMUSP00000114505	TRANSLATION	protein_coding	stop	-	3	124	0	1.37	0	49.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015745	Plekho1	ENSMUST00000130043	ENSMUSP00000115035	TRANSLATION	protein_coding	start/stop	-	2	262	0	1.37	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015745	Plekho1	ENSMUST00000123006	ENSMUSP00000118665	TRANSLATION	protein_coding	start	-	5	365	0	1.37	0	49.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015745	Plekho1	ENSMUST00000157043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001025	S100a6	ENSMUST00000198128	ENSMUSP00000143111	TRANSLATION	protein_coding	-	CCDS38506.1	3	89	14	2	8.3	63.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000001025	S100a6	ENSMUST00000200289	ENSMUSP00000143720	TRANSLATION	nonsense_mediated_decay	-	-	3	89	14	2	8.3	63.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001025	S100a6	ENSMUST00000197189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001025	S100a6	ENSMUST00000001051	ENSMUSP00000001051	TRANSLATION	protein_coding	-	CCDS38506.1	1	89	14	2	8.3	63.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000042092	Lce1c	ENSMUST00000047055	ENSMUSP00000045573	TRANSLATION	protein_coding	-	CCDS38514.1	1	147	0	0	0.5	31.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042572	Ube2q1	ENSMUST00000199427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042572	Ube2q1	ENSMUST00000038356	ENSMUSP00000037939	TRANSLATION	protein_coding	-	CCDS17517.1	1	422	0	5.566	6.3	38.2	0	-4,-5	-	-	13.772	PRINCIPAL:1
ENSMUSG00000042572	Ube2q1	ENSMUST00000196726	ENSMUSP00000143422	TRANSLATION	protein_coding	-	-	1	253	0	5.566	0.5	39.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000027901	Dennd2d	ENSMUST00000195305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027901	Dennd2d	ENSMUST00000149225	ENSMUSP00000141589	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027901	Dennd2d	ENSMUST00000193651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027901	Dennd2d	ENSMUST00000139062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027901	Dennd2d	ENSMUST00000029508	ENSMUSP00000029508	TRANSLATION	protein_coding	-	CCDS51040.1	1	466	0	3.505	3.9	291.4	0	-4,0	-	-	13	ALTERNATIVE:2
ENSMUSG00000027901	Dennd2d	ENSMUST00000183271	ENSMUSP00000138462	TRANSLATION	protein_coding	-	CCDS17722.2	1	476	0	3.505	2.7	291.4	0	-4,0	-	-	12.586	PRINCIPAL:3
ENSMUSG00000027806	Tsc22d2	ENSMUST00000199164	ENSMUSP00000143364	TRANSLATION	protein_coding	-	CCDS84624.1	1	745	0	1	1.5	90.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000027806	Tsc22d2	ENSMUST00000196049	ENSMUSP00000143214	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027806	Tsc22d2	ENSMUST00000199784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027806	Tsc22d2	ENSMUST00000099090	ENSMUSP00000096688	TRANSLATION	protein_coding	-	CCDS38435.1	3	769	0	1	1.5	90.7	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000013707	Tnfaip8l2	ENSMUST00000013851	ENSMUSP00000013851	TRANSLATION	protein_coding	-	CCDS17603.1	1	184	0	1	8.8	244.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027961	Lrrc39	ENSMUST00000203327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027961	Lrrc39	ENSMUST00000029573	ENSMUSP00000029573	TRANSLATION	protein_coding	-	CCDS17788.1	1	337	0	4.76	7.6	104.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000090210	Itga10	ENSMUST00000029744	ENSMUSP00000029744	TRANSLATION	protein_coding	-	-	5	1167	20	15.385	2.2	286.4	1	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000090210	Itga10	ENSMUST00000127607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090210	Itga10	ENSMUST00000119365	ENSMUSP00000112393	TRANSLATION	protein_coding	-	CCDS38557.2	1	1166	20	15.325	2.7	286	1	4,-1	-	-	17.856	PRINCIPAL:2
ENSMUSG00000033400	Agl	ENSMUST00000040603	ENSMUSP00000044012	TRANSLATION	protein_coding	-	CCDS38613.1	5	1532	5	19.44	6.3	1360.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000033400	Agl	ENSMUST00000161336	ENSMUSP00000123877	TRANSLATION	nonsense_mediated_decay	-	-	5	233	0	1.73	0	217.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033400	Agl	ENSMUST00000159995	ENSMUSP00000125246	TRANSLATION	protein_coding	start	-	1	198	2	1.74	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033400	Agl	ENSMUST00000162040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033400	Agl	ENSMUST00000162792	ENSMUSP00000124149	TRANSLATION	protein_coding	-	CCDS38613.1	2	1532	5	19.44	6.3	1360.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000033400	Agl	ENSMUST00000159742	ENSMUSP00000143582	TRANSLATION	protein_coding	-	-	1	1279	5	14.39	0	1093.6	0	-4,-5	-	-	5	MINOR
ENSMUSG00000033400	Agl	ENSMUST00000160484	ENSMUSP00000123985	TRANSLATION	protein_coding	start	-	1	830	0	11.33	0	693.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033400	Agl	ENSMUST00000159670	ENSMUSP00000124840	TRANSLATION	protein_coding	stop	-	5	116	0	0.28	0	78.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027875	Hmgcs2	ENSMUST00000120541	ENSMUSP00000113296	TRANSLATION	protein_coding	-	CCDS17662.1	1	508	28	8	7.5	786.2	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000027875	Hmgcs2	ENSMUST00000090746	ENSMUSP00000088249	TRANSLATION	protein_coding	-	CCDS17662.1	1	508	28	8	7.5	786.2	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000057609	Lce1a1	ENSMUST00000074142	ENSMUSP00000073776	TRANSLATION	protein_coding	-	CCDS17562.1	1	143	0	0	0.5	32.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027912	Lce1m	ENSMUST00000029520	ENSMUSP00000029520	TRANSLATION	protein_coding	-	CCDS17579.1	1	182	0	0	0.5	37.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027912	Lce1m	ENSMUST00000193944	ENSMUSP00000141488	TRANSLATION	protein_coding	stop	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027809	Etfdh	ENSMUST00000120992	ENSMUSP00000113888	TRANSLATION	protein_coding	-	-	1	556	50	10.5	7.4	190.9	0	-4,-5	-	-	18.465	MINOR
ENSMUSG00000027809	Etfdh	ENSMUST00000194620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027809	Etfdh	ENSMUST00000135058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027809	Etfdh	ENSMUST00000029386	ENSMUSP00000029386	TRANSLATION	protein_coding	-	CCDS17418.1	1	616	50	11.5	8.8	190.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000027809	Etfdh	ENSMUST00000153039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027809	Etfdh	ENSMUST00000149511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027809	Etfdh	ENSMUST00000126809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001418	Glmp	ENSMUST00000153716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001418	Glmp	ENSMUST00000001454	ENSMUSP00000001454	TRANSLATION	protein_coding	-	-	5	338	0	0	0	200.7	3	3,-1	-	-	0	MINOR
ENSMUSG00000001418	Glmp	ENSMUST00000152801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001418	Glmp	ENSMUST00000176519	ENSMUSP00000135263	TRANSLATION	protein_coding	-	-	5	148	0	0	0	74.9	0	3,-1	-	-	0	MINOR
ENSMUSG00000001418	Glmp	ENSMUST00000193646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001418	Glmp	ENSMUST00000176425	ENSMUSP00000135575	TRANSLATION	protein_coding	-	-	5	319	0	0	0	245.8	3	2,-1	-	-	0.384	MINOR
ENSMUSG00000001418	Glmp	ENSMUST00000140039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001418	Glmp	ENSMUST00000177005	ENSMUSP00000135398	TRANSLATION	protein_coding	-	CCDS17469.1	1	404	0	0	1.5	339.4	3	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000001418	Glmp	ENSMUST00000131666	ENSMUSP00000120235	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000001418	Glmp	ENSMUST00000154381	ENSMUSP00000134809	TRANSLATION	protein_coding	start	-	2	77	0	0	0	43.2	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027810	Eif2a	ENSMUST00000138827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027810	Eif2a	ENSMUST00000154219	ENSMUSP00000121236	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0.798	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027810	Eif2a	ENSMUST00000029387	ENSMUSP00000029387	TRANSLATION	protein_coding	-	CCDS17367.1	1	581	0	5.913	0.5	253.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027810	Eif2a	ENSMUST00000135876	ENSMUSP00000122375	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	0.798	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027810	Eif2a	ENSMUST00000137469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027810	Eif2a	ENSMUST00000138848	ENSMUSP00000120901	TRANSLATION	protein_coding	stop	-	5	251	0	4.715	0	53	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027810	Eif2a	ENSMUST00000148251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039717	Ralyl	ENSMUST00000108373	ENSMUSP00000148751	TRANSLATION	protein_coding	stop	-	5	89	0	1	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039717	Ralyl	ENSMUST00000191806	ENSMUSP00000148406	TRANSLATION	protein_coding	stop	-	2	85	0	1	0	46.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039717	Ralyl	ENSMUST00000211860	ENSMUSP00000148430	TRANSLATION	protein_coding	stop	-	5	163	0	2.08	0	46.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039717	Ralyl	ENSMUST00000193117	ENSMUSP00000148795	TRANSLATION	protein_coding	-	CCDS84609.1	2	293	0	1.75	11.5	46.5	0	-4,-5	-	-	14.046	PRINCIPAL:1
ENSMUSG00000039717	Ralyl	ENSMUST00000108372	ENSMUSP00000104009	TRANSLATION	protein_coding	-	CCDS50863.1	1	220	0	0.75	7.1	0	0	-4,-7	-	-	3.909	MINOR
ENSMUSG00000039717	Ralyl	ENSMUST00000171075	ENSMUSP00000125848	TRANSLATION	protein_coding	-	-	5	148	0	0.75	0	0	0	-4,-7	-	-	2.166	MINOR
ENSMUSG00000039717	Ralyl	ENSMUST00000192209	ENSMUSP00000142094	TRANSLATION	protein_coding	-	CCDS50864.1	3	164	0	0.75	1.5	0	0	-4,-7	-	-	2.31	MINOR
ENSMUSG00000042124	Lce1f	ENSMUST00000047153	ENSMUSP00000037349	TRANSLATION	protein_coding	-	CCDS38515.1	1	147	0	0	0.5	33.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044365	Cxxc4	ENSMUST00000181904	ENSMUSP00000138000	TRANSLATION	protein_coding	-	CCDS17851.2	5	366	8	0.4	1.5	32.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000044365	Cxxc4	ENSMUST00000197151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044365	Cxxc4	ENSMUST00000166288	ENSMUSP00000128574	TRANSLATION	protein_coding	-	-	5	198	8	0.4	0	32.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000044365	Cxxc4	ENSMUST00000199134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044365	Cxxc4	ENSMUST00000181597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094084	Tdpoz1	ENSMUST00000181541	ENSMUSP00000138008	TRANSLATION	protein_coding	-	CCDS57231.1	1	365	0	1	0.5	120.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094084	Tdpoz1	ENSMUST00000094413	ENSMUSP00000091980	TRANSLATION	protein_coding	-	CCDS57231.1	-	365	0	1	0.5	120.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043873	Chil5	ENSMUST00000200146	ENSMUSP00000142477	TRANSLATION	protein_coding	-	CCDS38584.1	5	431	2	8.452	0.5	285	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000043873	Chil5	ENSMUST00000054973	ENSMUSP00000052345	TRANSLATION	nonsense_mediated_decay	start	-	1	96	2	1.53	0	52.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043873	Chil5	ENSMUST00000066537	ENSMUSP00000065043	TRANSLATION	protein_coding	start	-	2	251	2	4.33	0	96.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028195	Ccn1	ENSMUST00000029846	ENSMUSP00000029846	TRANSLATION	protein_coding	-	CCDS17895.1	1	379	3	0	1.5	142.5	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000057123	Gja5	ENSMUST00000199597	ENSMUSP00000143542	TRANSLATION	protein_coding	-	-	1	368	0	1.9	0	420.3	4	-3,-7	-	-	10.656	MINOR
ENSMUSG00000057123	Gja5	ENSMUST00000132256	ENSMUSP00000123582	TRANSLATION	protein_coding	stop	-	1	81	0	1	0	141.4	1	-3,-7	-	-	-1	MINOR
ENSMUSG00000057123	Gja5	ENSMUST00000072600	ENSMUSP00000088264	TRANSLATION	protein_coding	-	CCDS17652.1	1	358	0	2.13	5.1	431.9	4	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000027674	Pex5l	ENSMUST00000192093	ENSMUSP00000141387	TRANSLATION	protein_coding	-	CCDS17302.1	1	615	0	7.88	7.8	60.1	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000027674	Pex5l	ENSMUST00000108224	ENSMUSP00000103859	TRANSLATION	protein_coding	-	CCDS79893.1	1	591	0	7.88	1.7	60.1	0	-4,-5	-	-	12.309	MINOR
ENSMUSG00000027674	Pex5l	ENSMUST00000193289	ENSMUSP00000142008	TRANSLATION	protein_coding	-	CCDS79894.1	1	650	0	7.88	7.8	60.1	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000027674	Pex5l	ENSMUST00000078226	ENSMUSP00000077353	TRANSLATION	protein_coding	-	CCDS17302.1	1	615	0	7.88	7.8	60.1	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000027674	Pex5l	ENSMUST00000108221	ENSMUSP00000103856	TRANSLATION	protein_coding	-	CCDS50888.1	1	344	0	6.75	0	60.1	0	-4,-5	-	-	9.738	MINOR
ENSMUSG00000027674	Pex5l	ENSMUST00000108225	ENSMUSP00000103860	TRANSLATION	protein_coding	-	CCDS17302.1	5	615	0	7.88	7.8	60.1	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000027674	Pex5l	ENSMUST00000194627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027674	Pex5l	ENSMUST00000108226	ENSMUSP00000103861	TRANSLATION	protein_coding	-	CCDS50889.1	1	567	0	7.88	6.6	60.1	0	-4,-5	-	-	14.472	ALTERNATIVE:1
ENSMUSG00000027674	Pex5l	ENSMUST00000108219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027674	Pex5l	ENSMUST00000155264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027674	Pex5l	ENSMUST00000193681	ENSMUSP00000141454	TRANSLATION	protein_coding	-	CCDS79894.1	1	650	0	7.88	7.8	60.1	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000027674	Pex5l	ENSMUST00000194016	ENSMUSP00000142196	TRANSLATION	protein_coding	-	CCDS79894.1	1	650	0	7.88	7.8	60.1	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000118505	ETV3L	ENSMUST00000238894	ENSMUSP00000158927	TRANSLATION	protein_coding	-	-	-	356	0	1.6	0.5	114.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000118505	ETV3L	ENSMUST00000238853	ENSMUSP00000159067	TRANSLATION	protein_coding	-	-	-	356	0	1.6	0.5	114.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048540	Nhlh2	ENSMUST00000198675	ENSMUSP00000143362	TRANSLATION	protein_coding	-	CCDS17685.1	2	135	0	0.6	8.8	64.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048540	Nhlh2	ENSMUST00000066187	ENSMUSP00000064355	TRANSLATION	protein_coding	-	CCDS17685.1	1	135	0	0.6	8.8	64.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048540	Nhlh2	ENSMUST00000196324	ENSMUSP00000142746	TRANSLATION	protein_coding	-	CCDS17685.1	1	135	0	0.6	8.8	64.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033831	Fgb	ENSMUST00000048246	ENSMUSP00000039472	TRANSLATION	protein_coding	-	CCDS17432.1	1	481	8	7.15	0.5	471.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033554	Dph5	ENSMUST00000200258	ENSMUSP00000143049	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033554	Dph5	ENSMUST00000189799	ENSMUSP00000140958	TRANSLATION	protein_coding	-	CCDS17782.1	5	281	13	6.31	7.6	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033554	Dph5	ENSMUST00000199970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033554	Dph5	ENSMUST00000185098	ENSMUSP00000139249	TRANSLATION	nonsense_mediated_decay	-	-	1	177	8	4.91	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033554	Dph5	ENSMUST00000196804	ENSMUSP00000142654	TRANSLATION	protein_coding	stop	-	2	114	8	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033554	Dph5	ENSMUST00000106505	ENSMUSP00000102114	TRANSLATION	protein_coding	-	-	1	145	8	3.56	0	0	0	-4,-5	-	-	3.162	MINOR
ENSMUSG00000033554	Dph5	ENSMUST00000043342	ENSMUSP00000043730	TRANSLATION	protein_coding	-	CCDS17782.1	1	281	13	6.31	7.6	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033554	Dph5	ENSMUST00000197561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027500	Stmn2	ENSMUST00000194905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027500	Stmn2	ENSMUST00000194307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027500	Stmn2	ENSMUST00000191847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027500	Stmn2	ENSMUST00000029002	ENSMUSP00000029002	TRANSLATION	protein_coding	-	CCDS17231.1	1	179	0	2.3	15.7	191.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027562	Car2	ENSMUST00000195520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027562	Car2	ENSMUST00000029078	ENSMUSP00000029078	TRANSLATION	protein_coding	-	CCDS17251.1	1	260	6	6.25	6.3	323.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027562	Car2	ENSMUST00000192609	ENSMUSP00000141876	TRANSLATION	protein_coding	stop	-	3	115	4	2.5	0	135.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004032	Gstm5	ENSMUST00000167523	ENSMUSP00000127840	TRANSLATION	nonsense_mediated_decay	-	-	3	73	8	2	0	40.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004032	Gstm5	ENSMUST00000167387	ENSMUSP00000127020	TRANSLATION	protein_coding	-	-	5	158	2	4.75	0	65.1	0	-4,-5	-	-	4.116	MINOR
ENSMUSG00000004032	Gstm5	ENSMUST00000169365	ENSMUSP00000128306	TRANSLATION	protein_coding	-	-	2	158	2	4.75	0	65.1	0	-4,-5	-	-	4.116	MINOR
ENSMUSG00000004032	Gstm5	ENSMUST00000172247	ENSMUSP00000129426	TRANSLATION	protein_coding	stop	-	2	215	10	6.02	0	137.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004032	Gstm5	ENSMUST00000004134	ENSMUSP00000004134	TRANSLATION	protein_coding	-	CCDS17741.1	1	224	10	6.75	5.1	140.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000004032	Gstm5	ENSMUST00000170058	ENSMUSP00000125913	TRANSLATION	nonsense_mediated_decay	-	-	5	69	3	1.25	0	30	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000087260	Lamtor5	ENSMUST00000199317	ENSMUSP00000143494	TRANSLATION	protein_coding	-	-	1	91	0	2.75	11.2	117.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000087260	Lamtor5	ENSMUST00000145735	ENSMUSP00000129012	TRANSLATION	protein_coding	-	CCDS51042.1	1	145	0	2.75	0.5	117.2	0	-4,-1	-	-	12	MINOR
ENSMUSG00000074206	Adh6b	ENSMUST00000199673	ENSMUSP00000148703	TRANSLATION	protein_coding	-	-	5	384	34	7.08	1.5	76.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000074206	Adh6b	ENSMUST00000090166	ENSMUSP00000148627	TRANSLATION	protein_coding	start	-	2	253	23	4	0	76.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074206	Adh6b	ENSMUST00000199718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078664	Sprr2a1	ENSMUST00000074449	ENSMUSP00000083330	TRANSLATION	protein_coding	-	CCDS17548.1	1	83	0	0	0.5	34.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000059832	Kprp	ENSMUST00000072363	ENSMUSP00000072200	TRANSLATION	protein_coding	-	CCDS38517.1	1	657	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000001021	S100a3	ENSMUST00000001047	ENSMUSP00000001047	TRANSLATION	protein_coding	-	CCDS17537.1	1	101	11	2	7.6	60.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000001021	S100a3	ENSMUST00000200508	ENSMUSP00000142747	TRANSLATION	protein_coding	-	CCDS17537.1	3	101	11	2	7.6	60.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000001021	S100a3	ENSMUST00000196635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001021	S100a3	ENSMUST00000200290	ENSMUSP00000142334	TRANSLATION	protein_coding	-	CCDS17537.1	1	101	11	2	7.6	60.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000068823	Csde1	ENSMUST00000197939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000198180	ENSMUSP00000142983	TRANSLATION	protein_coding	-	CCDS79990.1	1	767	0	10.8	6.3	311.5	0	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000068823	Csde1	ENSMUST00000196685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000029446	ENSMUSP00000029446	TRANSLATION	protein_coding	-	CCDS38569.1	1	798	0	10.8	8.8	311.5	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000068823	Csde1	ENSMUST00000197154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068823	Csde1	ENSMUST00000198906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000195889	ENSMUSP00000142647	TRANSLATION	nonsense_mediated_decay	start	-	5	151	0	3	0	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068823	Csde1	ENSMUST00000197488	ENSMUSP00000143524	TRANSLATION	protein_coding	-	CCDS79990.1	1	767	0	10.8	6.3	311.5	0	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000068823	Csde1	ENSMUST00000197844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000199571	ENSMUSP00000143028	TRANSLATION	protein_coding	-	CCDS79990.1	5	767	0	10.8	6.3	311.5	0	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000068823	Csde1	ENSMUST00000199240	ENSMUSP00000143050	TRANSLATION	protein_coding	-	CCDS79991.1	1	668	0	8.8	0.5	256.6	0	-4,-5	-	-	4.704	MINOR
ENSMUSG00000068823	Csde1	ENSMUST00000197827	ENSMUSP00000143503	TRANSLATION	protein_coding	-	CCDS38569.1	5	798	0	10.8	8.8	311.5	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000068823	Csde1	ENSMUST00000200617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000198174	ENSMUSP00000142395	TRANSLATION	nonsense_mediated_decay	start	-	1	112	0	2.5	0	67.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068823	Csde1	ENSMUST00000196521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068823	Csde1	ENSMUST00000198944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068823	Csde1	ENSMUST00000199420	ENSMUSP00000142703	TRANSLATION	protein_coding	-	CCDS79990.1	5	767	0	10.8	6.3	311.5	0	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000050150	Slc9b1	ENSMUST00000160047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050150	Slc9b1	ENSMUST00000159658	ENSMUSP00000124452	TRANSLATION	protein_coding	stop	-	2	144	0	0	0	0	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000050150	Slc9b1	ENSMUST00000161417	ENSMUSP00000125203	TRANSLATION	nonsense_mediated_decay	start	-	5	88	0	0.54	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000050150	Slc9b1	ENSMUST00000162767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050150	Slc9b1	ENSMUST00000161506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050150	Slc9b1	ENSMUST00000160941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050150	Slc9b1	ENSMUST00000159276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050150	Slc9b1	ENSMUST00000078568	ENSMUSP00000077644	TRANSLATION	protein_coding	-	CCDS17855.2	1	565	0	2.785	0.5	100	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050150	Slc9b1	ENSMUST00000160460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037111	Setd7	ENSMUST00000194828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037111	Setd7	ENSMUST00000037141	ENSMUSP00000043492	TRANSLATION	protein_coding	-	CCDS17341.1	1	366	11	5.95	10.4	78.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037111	Setd7	ENSMUST00000161755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037111	Setd7	ENSMUST00000195080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027953	Slc50a1	ENSMUST00000107460	ENSMUSP00000103084	TRANSLATION	protein_coding	-	-	5	167	0	2.36	2.4	171.5	7	-2,-5	-	-	8.574	MINOR
ENSMUSG00000027953	Slc50a1	ENSMUST00000130230	ENSMUSP00000123276	TRANSLATION	protein_coding	stop	-	2	109	0	1.65	0	72.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000027953	Slc50a1	ENSMUST00000185119	ENSMUSP00000139128	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	0.6	0	44.8	1	-2,-3	-	-	-1	MINOR
ENSMUSG00000027953	Slc50a1	ENSMUST00000132445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027953	Slc50a1	ENSMUST00000130690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027953	Slc50a1	ENSMUST00000148095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027953	Slc50a1	ENSMUST00000029565	ENSMUSP00000029565	TRANSLATION	protein_coding	-	CCDS17500.1	1	221	0	3.33	6.3	205.1	10	-2,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000027953	Slc50a1	ENSMUST00000133575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027953	Slc50a1	ENSMUST00000144777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000193007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001415	Smg5	ENSMUST00000193097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000192377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000192009	ENSMUSP00000141650	TRANSLATION	nonsense_mediated_decay	start	-	5	180	0	2.41	0	126.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001415	Smg5	ENSMUST00000194942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000192057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000194359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001415	Smg5	ENSMUST00000193224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001415	Smg5	ENSMUST00000001451	ENSMUSP00000001451	TRANSLATION	protein_coding	-	CCDS38480.1	1	1017	0	7.24	1.5	250.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028176	Lrrc7	ENSMUST00000198284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028176	Lrrc7	ENSMUST00000200137	ENSMUSP00000142498	TRANSLATION	protein_coding	-	CCDS80073.1	1	1495	0	12.924	3.9	184.8	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000028176	Lrrc7	ENSMUST00000106044	ENSMUSP00000101659	TRANSLATION	protein_coding	-	-	5	1542	0	12.924	1.7	184.8	0	-4,-7	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000028176	Lrrc7	ENSMUST00000238317	ENSMUSP00000158628	TRANSLATION	protein_coding	-	-	-	1488	0	12.924	3	184.8	0	-4,-2	-	-	12.69	ALTERNATIVE:2
ENSMUSG00000028176	Lrrc7	ENSMUST00000200196	ENSMUSP00000143365	TRANSLATION	protein_coding	start	-	5	1531	0	12.66	0	184.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028176	Lrrc7	ENSMUST00000199890	ENSMUSP00000142440	TRANSLATION	protein_coding	-	CCDS80072.1	1	1398	0	11.094	0.5	125	0	-4,-7	-	-	4.752	MINOR
ENSMUSG00000028176	Lrrc7	ENSMUST00000197866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074486	Bglap2	ENSMUST00000098956	ENSMUSP00000096555	TRANSLATION	protein_coding	-	CCDS17473.1	1	95	2	1.2	1.5	0	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000040209	Zfp704	ENSMUST00000041124	ENSMUSP00000041242	TRANSLATION	protein_coding	-	CCDS17234.1	1	566	4	0	1.5	0	0	-4,0	-	-	4	PRINCIPAL:1
ENSMUSG00000040209	Zfp704	ENSMUST00000193947	ENSMUSP00000141598	TRANSLATION	protein_coding	start	-	1	505	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040209	Zfp704	ENSMUST00000192832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036863	Syde2	ENSMUST00000195918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036863	Syde2	ENSMUST00000200546	ENSMUSP00000142954	TRANSLATION	protein_coding	-	-	1	1046	0	1.8	0	153.9	0	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036863	Syde2	ENSMUST00000212479	ENSMUSP00000148542	TRANSLATION	protein_coding	-	-	5	1047	0	1.8	0	153.9	0	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036863	Syde2	ENSMUST00000039517	ENSMUSP00000041897	TRANSLATION	protein_coding	-	CCDS57259.1	1	1314	0	1.8	0.5	153.9	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000028049	Scamp3	ENSMUST00000136165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028049	Scamp3	ENSMUST00000156447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028049	Scamp3	ENSMUST00000124291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028049	Scamp3	ENSMUST00000129294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028049	Scamp3	ENSMUST00000148881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028049	Scamp3	ENSMUST00000029684	ENSMUSP00000029684	TRANSLATION	protein_coding	-	CCDS50959.1	1	349	0	0	2.7	228.9	5	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000028049	Scamp3	ENSMUST00000120697	ENSMUSP00000112846	TRANSLATION	protein_coding	-	CCDS84640.1	1	350	0	0	2.7	228.9	5	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028049	Scamp3	ENSMUST00000098941	ENSMUSP00000096540	TRANSLATION	protein_coding	-	CCDS84641.1	1	315	0	0	0.5	129.2	4	-4,-5	-	-	0.018	MINOR
ENSMUSG00000061175	Fnip2	ENSMUST00000239298	ENSMUSP00000159232	TRANSLATION	protein_coding	stop	-	-	677	0	0	0	399.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061175	Fnip2	ENSMUST00000133154	ENSMUSP00000115275	TRANSLATION	protein_coding	-	-	5	1138	0	0	0.5	636.4	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000061175	Fnip2	ENSMUST00000149475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061175	Fnip2	ENSMUST00000076136	ENSMUSP00000075497	TRANSLATION	protein_coding	-	CCDS50934.1	5	1108	0	0	0.5	636.4	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000061175	Fnip2	ENSMUST00000130613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061175	Fnip2	ENSMUST00000154645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061175	Fnip2	ENSMUST00000139171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027777	Schip1	ENSMUST00000169909	ENSMUSP00000129152	TRANSLATION	protein_coding	-	CCDS50927.1	1	256	0	0	1.7	366.1	0	-4,-5	-	-	6.184	MINOR
ENSMUSG00000027777	Schip1	ENSMUST00000182719	ENSMUSP00000138207	TRANSLATION	protein_coding	-	CCDS71249.1	1	456	0	0	0.5	366.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000027777	Schip1	ENSMUST00000029346	ENSMUSP00000029346	TRANSLATION	protein_coding	-	CCDS50926.1	1	484	0	0	0.5	366.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000027777	Schip1	ENSMUST00000170788	ENSMUSP00000126443	TRANSLATION	protein_coding	-	CCDS50929.1	1	244	0	0	16.3	366.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000027777	Schip1	ENSMUST00000182997	ENSMUSP00000138241	TRANSLATION	protein_coding	-	-	1	261	0	0	5.9	366.1	0	-4,-5	-	-	7.28	MINOR
ENSMUSG00000027777	Schip1	ENSMUST00000182360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027777	Schip1	ENSMUST00000192555	ENSMUSP00000142090	TRANSLATION	protein_coding	stop	-	5	388	0	0	0	231.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027777	Schip1	ENSMUST00000182532	ENSMUSP00000138245	TRANSLATION	protein_coding	-	CCDS71249.1	1	456	0	0	0.5	366.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000028030	Tbck	ENSMUST00000196491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028030	Tbck	ENSMUST00000029664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028030	Tbck	ENSMUST00000169172	ENSMUSP00000129205	TRANSLATION	protein_coding	-	CCDS51070.1	5	893	0	8.945	7.5	326.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028030	Tbck	ENSMUST00000198147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053192	Mllt11	ENSMUST00000065482	ENSMUSP00000066448	TRANSLATION	protein_coding	-	CCDS38544.1	1	90	0	0	7.5	67.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000053192	Mllt11	ENSMUST00000199917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053192	Mllt11	ENSMUST00000198948	ENSMUSP00000142604	TRANSLATION	protein_coding	-	CCDS38544.1	3	90	0	0	7.5	67.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000053192	Mllt11	ENSMUST00000198087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053192	Mllt11	ENSMUST00000196025	ENSMUSP00000143755	TRANSLATION	protein_coding	-	CCDS38544.1	3	90	0	0	7.5	67.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000027713	1810062G17Rik	ENSMUST00000029268	ENSMUSP00000029268	TRANSLATION	protein_coding	-	CCDS57208.1	1	129	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000042997	Nhlrc3	ENSMUST00000056749	ENSMUSP00000055295	TRANSLATION	protein_coding	-	CCDS17345.1	1	347	3	2.5	5.1	28.3	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000042997	Nhlrc3	ENSMUST00000130348	ENSMUSP00000114215	TRANSLATION	nonsense_mediated_decay	-	-	1	108	0	0.4	0	0	0	2,-4	-	-	-1	MINOR
ENSMUSG00000042997	Nhlrc3	ENSMUST00000129497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042997	Nhlrc3	ENSMUST00000153342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042997	Nhlrc3	ENSMUST00000198983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074655	Gm1527	ENSMUST00000099170	ENSMUSP00000096773	TRANSLATION	protein_coding	-	CCDS38404.1	1	650	0	3.08	0.5	131	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005779	Psmb4	ENSMUST00000200513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005779	Psmb4	ENSMUST00000136143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005779	Psmb4	ENSMUST00000133412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005779	Psmb4	ENSMUST00000005923	ENSMUSP00000005923	TRANSLATION	protein_coding	-	CCDS17597.1	1	264	0	5.75	5.1	116.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000005779	Psmb4	ENSMUST00000134133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091512	Lamtor3	ENSMUST00000200656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091512	Lamtor3	ENSMUST00000168345	ENSMUSP00000130811	TRANSLATION	protein_coding	-	CCDS51078.1	1	124	0	3.75	19.5	166.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000091512	Lamtor3	ENSMUST00000200269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091512	Lamtor3	ENSMUST00000196632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091512	Lamtor3	ENSMUST00000197817	ENSMUSP00000143656	TRANSLATION	protein_coding	stop	-	5	36	0	1.25	0	42.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091512	Lamtor3	ENSMUST00000200107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091512	Lamtor3	ENSMUST00000197798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091512	Lamtor3	ENSMUST00000197064	ENSMUSP00000142512	TRANSLATION	protein_coding	-	CCDS51078.1	3	124	0	3.75	19.5	166.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027959	Sass6	ENSMUST00000198386	ENSMUSP00000143175	TRANSLATION	protein_coding	-	-	1	560	0	5.18	1.2	92.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000027959	Sass6	ENSMUST00000198514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027959	Sass6	ENSMUST00000197063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027959	Sass6	ENSMUST00000029571	ENSMUSP00000029571	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	1.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027959	Sass6	ENSMUST00000196619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027959	Sass6	ENSMUST00000197335	ENSMUSP00000143123	TRANSLATION	protein_coding	-	CCDS80008.1	1	619	0	3.6	0.5	92.1	0	-4,-5	-	-	8.838	MINOR
ENSMUSG00000027959	Sass6	ENSMUST00000198311	ENSMUSP00000143233	TRANSLATION	protein_coding	-	CCDS17789.1	1	654	0	5.18	0.5	92.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000027959	Sass6	ENSMUST00000198747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086564	Cd101	ENSMUST00000167086	ENSMUSP00000126027	TRANSLATION	protein_coding	-	-	5	1029	0	0.84	0	91.9	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000086564	Cd101	ENSMUST00000147399	ENSMUSP00000116643	TRANSLATION	protein_coding	-	CCDS51020.1	1	1033	0	0.84	0.5	91.9	1	2,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000027870	Hao2	ENSMUST00000029464	ENSMUSP00000029464	TRANSLATION	protein_coding	-	CCDS17671.1	1	353	22	6.25	0.5	419.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031286	Glt28d2	ENSMUST00000033643	ENSMUSP00000033643	TRANSLATION	protein_coding	-	CCDS17443.1	1	165	12	0.4	5.1	101.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000090202	4930503B20Rik	ENSMUST00000049703	ENSMUSP00000051453	TRANSLATION	protein_coding	-	CCDS38667.1	1	234	0	0.6	0.5	93.9	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000090202	4930503B20Rik	ENSMUST00000126930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090202	4930503B20Rik	ENSMUST00000149825	ENSMUSP00000114745	TRANSLATION	protein_coding	-	-	1	231	0	0.6	0.5	93.9	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000041423	Paqr6	ENSMUST00000149640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041423	Paqr6	ENSMUST00000147818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041423	Paqr6	ENSMUST00000123200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041423	Paqr6	ENSMUST00000147948	ENSMUSP00000119656	TRANSLATION	protein_coding	-	CCDS79941.1	2	233	0	1.96	2.9	65.6	3	-4,-2	-	-	5.49	MINOR
ENSMUSG00000041423	Paqr6	ENSMUST00000147991	ENSMUSP00000114166	TRANSLATION	protein_coding	-	CCDS17471.1	1	343	0	2.58	7.6	164.5	7	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000040253	Gbp7	ENSMUST00000045097	ENSMUSP00000049104	TRANSLATION	protein_coding	-	CCDS38657.1	1	638	16	9	0.5	829.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040253	Gbp7	ENSMUST00000171263	ENSMUSP00000132970	TRANSLATION	protein_coding	-	CCDS38657.1	1	638	16	9	0.5	829.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028161	Ppp3ca	ENSMUST00000056758	ENSMUSP00000053101	TRANSLATION	protein_coding	-	CCDS17860.1	1	521	10	12.33	13	133.7	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000028161	Ppp3ca	ENSMUST00000130768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028161	Ppp3ca	ENSMUST00000124777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028161	Ppp3ca	ENSMUST00000124206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028161	Ppp3ca	ENSMUST00000196170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028161	Ppp3ca	ENSMUST00000130114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028161	Ppp3ca	ENSMUST00000070198	ENSMUSP00000071040	TRANSLATION	protein_coding	-	CCDS80027.1	1	511	10	12	13	133.7	0	-4,-5	-	-	21.34	ALTERNATIVE:1
ENSMUSG00000028161	Ppp3ca	ENSMUST00000196603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027983	Cyp2u1	ENSMUST00000200236	ENSMUSP00000142519	TRANSLATION	protein_coding	-	-	1	501	30	3.44	0	359.7	1	-3,-1	-	-	11.04	MINOR
ENSMUSG00000027983	Cyp2u1	ENSMUST00000106337	ENSMUSP00000101944	TRANSLATION	protein_coding	-	CCDS51069.1	1	530	33	4.2	0.5	417.1	1	-3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000027983	Cyp2u1	ENSMUST00000198606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040943	Tet2	ENSMUST00000098603	ENSMUSP00000096203	TRANSLATION	protein_coding	-	CCDS51071.1	5	1912	3	7.25	0.5	514.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000040943	Tet2	ENSMUST00000196398	ENSMUSP00000143029	TRANSLATION	protein_coding	-	CCDS84675.1	1	1920	3	7.085	0.5	514.3	0	-4,-5	-	-	14.67	ALTERNATIVE:2
ENSMUSG00000040943	Tet2	ENSMUST00000199381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040943	Tet2	ENSMUST00000200203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040943	Tet2	ENSMUST00000197211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040943	Tet2	ENSMUST00000198974	ENSMUSP00000143468	TRANSLATION	protein_coding	start/stop	-	3	157	4	1.89	0	149	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040943	Tet2	ENSMUST00000197118	ENSMUSP00000143619	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040943	Tet2	ENSMUST00000196292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040943	Tet2	ENSMUST00000199176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040943	Tet2	ENSMUST00000195913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028088	Fmo5	ENSMUST00000029729	ENSMUSP00000029729	TRANSLATION	protein_coding	-	CCDS17656.1	1	533	42	3.33	1.5	920.4	1	-2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028088	Fmo5	ENSMUST00000140283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028088	Fmo5	ENSMUST00000133017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028088	Fmo5	ENSMUST00000107049	ENSMUSP00000102664	TRANSLATION	protein_coding	-	CCDS17656.1	1	533	42	3.33	1.5	920.4	1	-2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028088	Fmo5	ENSMUST00000107050	ENSMUSP00000102665	TRANSLATION	protein_coding	-	CCDS17656.1	1	533	42	3.33	1.5	920.4	1	-2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000053819	Camk2d	ENSMUST00000147043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000171950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053819	Camk2d	ENSMUST00000200171	ENSMUSP00000143677	TRANSLATION	protein_coding	-	CCDS84670.1	5	533	22	13.85	6.3	460	1	-4,-5	-	-	19.545	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000200010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000106399	ENSMUSP00000102007	TRANSLATION	protein_coding	-	CCDS38624.1	1	512	22	13.85	9.1	459.5	1	-4,-5	-	-	20.328	PRINCIPAL:3
ENSMUSG00000053819	Camk2d	ENSMUST00000198487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000167417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000149311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000167985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000199300	ENSMUSP00000143504	TRANSLATION	protein_coding	-	CCDS17823.1	1	499	22	13.25	7.5	460	1	-4,-5	-	-	18.693	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000163226	ENSMUSP00000133019	TRANSLATION	protein_coding	-	CCDS80017.1	1	361	18	10.5	0.5	254.5	1	-4,-5	-	-	3.336	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000198637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000129293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000170149	ENSMUSP00000130305	TRANSLATION	protein_coding	start	-	3	169	4	3.57	0	205.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000145454	ENSMUSP00000130769	TRANSLATION	nonsense_mediated_decay	-	-	2	142	14	4.5	0	113.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000066466	ENSMUSP00000063359	TRANSLATION	protein_coding	-	CCDS80016.1	1	492	22	13.53	9.1	460	1	-4,-5	-	-	19.716	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000066452	ENSMUSP00000066996	TRANSLATION	protein_coding	start	-	5	160	4	3.25	0	205.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000197660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000106400	ENSMUSP00000102008	TRANSLATION	protein_coding	-	CCDS51065.1	1	478	22	13.25	9.3	460	1	-4,-5	-	-	19.218	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000169051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000131869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053819	Camk2d	ENSMUST00000143383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053819	Camk2d	ENSMUST00000131156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000134987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053819	Camk2d	ENSMUST00000171289	ENSMUSP00000129999	TRANSLATION	protein_coding	-	CCDS84671.1	5	533	22	13.85	6.3	459.5	1	-4,-5	-	-	19.515	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000134466	ENSMUSP00000114801	TRANSLATION	nonsense_mediated_decay	-	-	2	147	16	4.698	0	113.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000106401	ENSMUSP00000102009	TRANSLATION	protein_coding	-	-	5	488	22	13.212	6.1	460	1	-4,-5	-	-	18.207	MINOR
ENSMUSG00000053819	Camk2d	ENSMUST00000106402	ENSMUSP00000102010	TRANSLATION	protein_coding	-	CCDS80015.1	1	512	22	13.85	11.3	460	1	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000090408	Gm17402	ENSMUST00000166353	ENSMUSP00000131993	TRANSLATION	protein_coding	start/stop	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000001020	S100a4	ENSMUST00000001046	ENSMUSP00000001046	TRANSLATION	protein_coding	-	CCDS17538.1	1	101	16	2.75	8.8	72.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001020	S100a4	ENSMUST00000142476	ENSMUSP00000143522	TRANSLATION	protein_coding	stop	-	1	78	16	2	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000103034	Gm8797	ENSMUST00000192045	ENSMUSP00000141419	TRANSLATION	protein_coding	-	-	-	77	0	1	1	120.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027827	Kcnab1	ENSMUST00000239069	ENSMUSP00000158882	TRANSLATION	protein_coding	-	-	-	408	31	9.25	6.5	238.7	0	-4,-6	-	-	19.572	MINOR
ENSMUSG00000027827	Kcnab1	ENSMUST00000159525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027827	Kcnab1	ENSMUST00000161404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027827	Kcnab1	ENSMUST00000161979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027827	Kcnab1	ENSMUST00000193778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027827	Kcnab1	ENSMUST00000160136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027827	Kcnab1	ENSMUST00000049230	ENSMUSP00000047480	TRANSLATION	protein_coding	-	CCDS38447.1	1	401	31	9.25	15	238.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027827	Kcnab1	ENSMUST00000161956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027827	Kcnab1	ENSMUST00000238901	ENSMUSP00000159000	TRANSLATION	protein_coding	-	-	-	419	31	9.25	5.2	238.7	0	-4,-5	-	-	19.2	MINOR
ENSMUSG00000074264	Amy1	ENSMUST00000172885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074264	Amy1	ENSMUST00000142505	ENSMUSP00000120493	TRANSLATION	protein_coding	stop	-	5	272	30	5.5	0	43.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000074264	Amy1	ENSMUST00000067980	ENSMUSP00000070368	TRANSLATION	protein_coding	-	CCDS17776.1	1	511	48	11.25	14.2	113.2	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000074264	Amy1	ENSMUST00000174147	ENSMUSP00000133875	TRANSLATION	protein_coding	stop	-	2	131	7	2.75	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000074264	Amy1	ENSMUST00000106540	ENSMUSP00000102150	TRANSLATION	protein_coding	-	CCDS17776.1	1	511	48	11.25	14.2	113.2	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000068885	Lce3f	ENSMUST00000090863	ENSMUSP00000088375	TRANSLATION	protein_coding	-	CCDS38522.1	1	98	0	0	0.5	103.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028003	Lrat	ENSMUST00000029632	ENSMUSP00000029632	TRANSLATION	protein_coding	-	CCDS17430.1	1	231	0	0.8	3.9	142	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000027896	Slc16a4	ENSMUST00000153322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027896	Slc16a4	ENSMUST00000106723	ENSMUSP00000102334	TRANSLATION	protein_coding	-	CCDS79997.1	1	468	0	0	0.5	87.5	10	-4,-6	-	-	5.946	ALTERNATIVE:2
ENSMUSG00000027896	Slc16a4	ENSMUST00000029502	ENSMUSP00000029502	TRANSLATION	protein_coding	-	CCDS17736.1	1	500	0	0	0.5	88.3	12	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000054988	Agtr1b	ENSMUST00000163776	ENSMUSP00000128724	TRANSLATION	protein_coding	-	CCDS17264.1	5	359	0	1	8.8	173	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000054988	Agtr1b	ENSMUST00000068316	ENSMUSP00000068298	TRANSLATION	protein_coding	-	CCDS17264.1	1	359	0	1	8.8	173	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000036745	Ttll7	ENSMUST00000106134	ENSMUSP00000101740	TRANSLATION	protein_coding	-	-	5	887	15	11.3	0.5	259.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036745	Ttll7	ENSMUST00000038090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036745	Ttll7	ENSMUST00000124743	ENSMUSP00000143151	TRANSLATION	protein_coding	start	-	1	47	1	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036745	Ttll7	ENSMUST00000170055	ENSMUSP00000129369	TRANSLATION	protein_coding	-	-	5	892	15	11.3	0	259.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036745	Ttll7	ENSMUST00000037942	ENSMUSP00000043753	TRANSLATION	protein_coding	-	CCDS51094.2	5	912	15	11.3	0.5	259.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000036745	Ttll7	ENSMUST00000197547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074424	Spopfm2	ENSMUST00000161475	ENSMUSP00000124942	TRANSLATION	protein_coding	-	CCDS50982.1	1	357	0	1	0.5	112.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074424	Spopfm2	ENSMUST00000167916	ENSMUSP00000132199	TRANSLATION	protein_coding	-	CCDS50982.1	-	357	0	1	0.5	112.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037737	Actrt3	ENSMUST00000047630	ENSMUSP00000048360	TRANSLATION	protein_coding	-	CCDS17283.1	1	369	27	1.8	3.9	365.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027792	Bche	ENSMUST00000153917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027792	Bche	ENSMUST00000138216	ENSMUSP00000141329	TRANSLATION	protein_coding	stop	-	2	174	7	1	0	176.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000027792	Bche	ENSMUST00000133690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027792	Bche	ENSMUST00000029367	ENSMUSP00000029367	TRANSLATION	protein_coding	-	CCDS17411.1	1	603	11	4	0.5	657.7	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000044165	Bcl2l15	ENSMUST00000199772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044165	Bcl2l15	ENSMUST00000196184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044165	Bcl2l15	ENSMUST00000062945	ENSMUSP00000052210	TRANSLATION	protein_coding	-	CCDS51027.1	1	167	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:4
ENSMUSG00000044165	Bcl2l15	ENSMUST00000106822	ENSMUSP00000102435	TRANSLATION	protein_coding	-	CCDS51028.1	1	165	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000004891	Nes	ENSMUST00000159830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004891	Nes	ENSMUST00000160694	ENSMUSP00000125571	TRANSLATION	protein_coding	-	-	1	1820	0	1.45	0	96.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004891	Nes	ENSMUST00000090973	ENSMUSP00000088493	TRANSLATION	protein_coding	-	CCDS17461.1	1	1864	0	1.45	0.5	96.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068876	Cgn	ENSMUST00000107273	ENSMUSP00000102894	TRANSLATION	protein_coding	-	-	1	1191	0	2.61	0.5	118.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068876	Cgn	ENSMUST00000155485	ENSMUSP00000142809	TRANSLATION	protein_coding	-	-	2	448	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068876	Cgn	ENSMUST00000238849	ENSMUSP00000159109	TRANSLATION	protein_coding	-	CCDS50984.1	-	1192	0	2.61	0.5	118.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068876	Cgn	ENSMUST00000107272	ENSMUSP00000102893	TRANSLATION	protein_coding	-	-	1	1183	0	2.61	0.5	118.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068876	Cgn	ENSMUST00000153263	ENSMUSP00000143156	TRANSLATION	protein_coding	-	-	2	403	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046317	BC107364	ENSMUST00000098841	ENSMUSP00000096440	TRANSLATION	protein_coding	-	CCDS57244.1	1	99	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000046317	BC107364	ENSMUST00000093126	ENSMUSP00000090814	TRANSLATION	protein_coding	-	CCDS57245.1	1	140	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:4
ENSMUSG00000047557	Lxn	ENSMUST00000058981	ENSMUSP00000060732	TRANSLATION	protein_coding	-	CCDS17397.1	1	222	0	5.5	8.8	315.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047557	Lxn	ENSMUST00000160202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047557	Lxn	ENSMUST00000160827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040562	Gstm2	ENSMUST00000140420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040562	Gstm2	ENSMUST00000012348	ENSMUSP00000012348	TRANSLATION	protein_coding	-	CCDS17746.1	1	218	10	6.5	10.8	145.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000040562	Gstm2	ENSMUST00000150808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040562	Gstm2	ENSMUST00000066530	ENSMUSP00000066675	TRANSLATION	protein_coding	-	-	3	184	7	5.25	2.7	104.6	0	-4,-5	-	-	11.583	MINOR
ENSMUSG00000045326	Fndc7	ENSMUST00000151713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045326	Fndc7	ENSMUST00000139137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045326	Fndc7	ENSMUST00000102620	ENSMUSP00000099680	TRANSLATION	protein_coding	-	CCDS17769.1	1	737	0	1.558	1.5	24.7	0	-1,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000045326	Fndc7	ENSMUST00000123018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045326	Fndc7	ENSMUST00000180063	ENSMUSP00000136215	TRANSLATION	protein_coding	-	-	5	737	0	1.36	1.5	24.7	0	-2,-1	-	-	11.238	ALTERNATIVE:2
ENSMUSG00000045326	Fndc7	ENSMUST00000053065	ENSMUSP00000051172	TRANSLATION	protein_coding	-	CCDS51050.1	1	651	0	1.078	0.5	24.7	0	-1,-5	-	-	10.152	MINOR
ENSMUSG00000045326	Fndc7	ENSMUST00000147002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048039	Isg20l2	ENSMUST00000055984	ENSMUSP00000059783	TRANSLATION	protein_coding	-	CCDS17459.1	1	368	8	2	1.5	41.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027737	Slc7a11	ENSMUST00000142932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027737	Slc7a11	ENSMUST00000193838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027737	Slc7a11	ENSMUST00000192564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027737	Slc7a11	ENSMUST00000029297	ENSMUSP00000029297	TRANSLATION	protein_coding	-	CCDS17335.1	1	502	0	4.28	10.8	109.3	8	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027737	Slc7a11	ENSMUST00000194462	ENSMUSP00000141988	TRANSLATION	protein_coding	-	-	1	490	0	4.28	0	109.3	8	-4,-6	-	-	12	MINOR
ENSMUSG00000028096	Gpr89	ENSMUST00000199586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028096	Gpr89	ENSMUST00000146645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028096	Gpr89	ENSMUST00000154750	ENSMUSP00000116016	TRANSLATION	nonsense_mediated_decay	-	-	3	111	0	0	0	0	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000028096	Gpr89	ENSMUST00000135533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028096	Gpr89	ENSMUST00000139599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028096	Gpr89	ENSMUST00000029738	ENSMUSP00000029738	TRANSLATION	protein_coding	-	CCDS17650.1	1	455	0	0	19.5	244.7	8	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000060798	Intu	ENSMUST00000204176	ENSMUSP00000144877	TRANSLATION	protein_coding	start/stop	-	5	258	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060798	Intu	ENSMUST00000061590	ENSMUSP00000054313	TRANSLATION	protein_coding	-	-	2	229	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000060798	Intu	ENSMUST00000091186	ENSMUSP00000088725	TRANSLATION	protein_coding	-	CCDS84619.1	1	942	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000025128	Bhlhe22	ENSMUST00000026120	ENSMUSP00000026120	TRANSLATION	protein_coding	-	CCDS17253.1	-	355	0	0.2	1.5	51.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042784	Muc1	ENSMUST00000146844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042784	Muc1	ENSMUST00000139206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042784	Muc1	ENSMUST00000041142	ENSMUSP00000041963	TRANSLATION	protein_coding	-	CCDS17496.1	1	631	0	1.8	0.5	43	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000104043	Gm6525	ENSMUST00000193882	ENSMUSP00000141377	TRANSLATION	protein_coding	-	-	-	106	2	0.8	19.5	122.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000027952	Pmvk	ENSMUST00000107410	ENSMUSP00000103033	TRANSLATION	protein_coding	-	-	5	158	9	4.316	0	159	0	-4,-2	-	-	16.134	MINOR
ENSMUSG00000027952	Pmvk	ENSMUST00000198440	ENSMUSP00000143154	TRANSLATION	protein_coding	-	CCDS79953.1	1	117	2	2.75	5.1	58.1	0	-4,-5	-	-	4.227	MINOR
ENSMUSG00000027952	Pmvk	ENSMUST00000029564	ENSMUSP00000029564	TRANSLATION	protein_coding	-	CCDS17511.1	1	192	9	5.25	7.5	159	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000027952	Pmvk	ENSMUST00000184515	ENSMUSP00000139116	TRANSLATION	protein_coding	-	CCDS71270.1	1	171	2	4.25	0.5	123	0	-4,-7	-	-	9.174	MINOR
ENSMUSG00000092049	Vmn2r4	ENSMUST00000170280	ENSMUSP00000127513	TRANSLATION	protein_coding	-	CCDS50921.1	5	824	0	3.52	0.5	499.4	9	-4,-5	-	-	10.704	MINOR
ENSMUSG00000092049	Vmn2r4	ENSMUST00000175724	ENSMUSP00000135228	TRANSLATION	protein_coding	-	-	5	913	0	4.05	0.5	503.3	9	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000092049	Vmn2r4	ENSMUST00000233020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092049	Vmn2r4	ENSMUST00000233824	ENSMUSP00000156687	TRANSLATION	nonsense_mediated_decay	-	-	-	595	0	3.636	0	327.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000040774	Cept1	ENSMUST00000192438	ENSMUSP00000142097	TRANSLATION	protein_coding	stop	-	5	247	0	0	0	66.7	11	-4,-7	-	-	-1	MINOR
ENSMUSG00000040774	Cept1	ENSMUST00000068301	ENSMUSP00000065743	TRANSLATION	protein_coding	-	CCDS17723.1	1	416	0	0	11	66.7	17	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000040774	Cept1	ENSMUST00000137530	ENSMUSP00000115898	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040774	Cept1	ENSMUST00000141525	ENSMUSP00000122460	TRANSLATION	protein_coding	stop	-	2	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040774	Cept1	ENSMUST00000121231	ENSMUSP00000112509	TRANSLATION	protein_coding	-	CCDS17723.1	5	416	0	0	11	66.7	17	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000040774	Cept1	ENSMUST00000148269	ENSMUSP00000118343	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	66.7	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000040774	Cept1	ENSMUST00000039153	ENSMUSP00000037277	TRANSLATION	protein_coding	-	CCDS79995.1	1	416	0	0	11	66.7	16	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000051036	Ttc24	ENSMUST00000238508	-	NO_TRANSLATION	transcribed_unitary_pseudogene
ENSMUSG00000051036	Ttc24	ENSMUST00000050258	ENSMUSP00000061571	TRANSLATION	protein_coding	-	CCDS17465.1	1	334	0	2.6	0.5	53.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051036	Ttc24	ENSMUST00000238487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051036	Ttc24	ENSMUST00000064550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017688	Hnf4g	ENSMUST00000108394	ENSMUSP00000104031	TRANSLATION	protein_coding	-	-	5	462	25	7.4	5.1	238.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000017688	Hnf4g	ENSMUST00000108393	ENSMUSP00000104030	TRANSLATION	protein_coding	-	CCDS17226.1	1	418	25	7.4	1.5	238.9	0	-4,-5	-	-	18.244	MINOR
ENSMUSG00000005034	Prkacb	ENSMUST00000102515	ENSMUSP00000099573	TRANSLATION	protein_coding	-	CCDS17906.1	1	351	24	9.75	13.7	245.8	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000005034	Prkacb	ENSMUST00000005164	ENSMUSP00000005164	TRANSLATION	protein_coding	-	CCDS51092.1	1	398	24	9.25	3.7	245.8	0	-4,-7	-	-	17.85	MINOR
ENSMUSG00000005034	Prkacb	ENSMUST00000199722	ENSMUSP00000143303	TRANSLATION	protein_coding	stop	-	1	106	9	3.25	0	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005034	Prkacb	ENSMUST00000197616	ENSMUSP00000142490	TRANSLATION	protein_coding	stop	-	1	189	17	4.75	0	103.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005034	Prkacb	ENSMUST00000106138	ENSMUSP00000101744	TRANSLATION	protein_coding	-	CCDS51091.1	1	339	24	9.25	11.5	245.8	0	-4,-5	-	-	20.306	MINOR
ENSMUSG00000005034	Prkacb	ENSMUST00000106137	ENSMUSP00000101743	TRANSLATION	protein_coding	-	CCDS51090.1	1	338	24	9.25	13.5	245.8	0	-4,-5	-	-	20.934	ALTERNATIVE:1
ENSMUSG00000005034	Prkacb	ENSMUST00000196344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005034	Prkacb	ENSMUST00000144369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096770	Amy2a4	ENSMUST00000179568	ENSMUSP00000137025	TRANSLATION	protein_coding	-	CCDS51054.1	1	508	48	9.8	8.8	118.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000162114	ENSMUSP00000124822	TRANSLATION	protein_coding	-	-	1	199	0	0	0	258.3	1	-3,-5	-	-	6	MINOR
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000159202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000162595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000161874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000160640	ENSMUSP00000124028	TRANSLATION	protein_coding	-	CCDS17520.1	1	253	0	0	11.6	258.3	1	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000159064	ENSMUSP00000124554	TRANSLATION	protein_coding	-	CCDS17520.1	1	253	0	0	11.6	258.3	1	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000162390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000161918	ENSMUSP00000123740	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	95.2	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000029552	ENSMUSP00000029552	TRANSLATION	protein_coding	-	CCDS50967.1	1	189	0	0	2.9	258.3	1	-3,-5	-	-	6.537	MINOR
ENSMUSG00000027942	4933434E20Rik	ENSMUST00000068798	ENSMUSP00000066840	TRANSLATION	protein_coding	-	-	5	235	0	0	3.4	139.7	1	-3,-5	-	-	0.678	MINOR
ENSMUSG00000042642	Flad1	ENSMUST00000129308	ENSMUSP00000122252	TRANSLATION	protein_coding	-	CCDS38492.1	1	492	31	5.32	7.5	183	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000042642	Flad1	ENSMUST00000107426	ENSMUSP00000103049	TRANSLATION	protein_coding	-	CCDS38492.1	1	492	31	5.32	7.5	183	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000042642	Flad1	ENSMUST00000050398	ENSMUSP00000051366	TRANSLATION	protein_coding	-	-	1	518	31	5.32	0	183	0	-4,-5	-	-	18	MINOR
ENSMUSG00000042642	Flad1	ENSMUST00000107429	ENSMUSP00000103052	TRANSLATION	protein_coding	stop	-	2	174	6	1.87	0	103.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042642	Flad1	ENSMUST00000162701	ENSMUSP00000125654	TRANSLATION	protein_coding	stop	-	2	99	4	1.45	0	86.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050359	Sprr1a	ENSMUST00000054599	ENSMUSP00000053751	TRANSLATION	protein_coding	-	CCDS17559.1	1	144	0	0	1.5	171.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028016	Ints12	ENSMUST00000160669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028016	Ints12	ENSMUST00000029650	ENSMUSP00000029650	TRANSLATION	protein_coding	-	CCDS17848.1	1	461	8	1.8	0.5	38.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028016	Ints12	ENSMUST00000160036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027957	Slc35a3	ENSMUST00000029569	ENSMUSP00000029569	TRANSLATION	protein_coding	-	CCDS17791.1	1	326	0	0	14.8	461.4	11	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000027957	Slc35a3	ENSMUST00000196331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027957	Slc35a3	ENSMUST00000120120	ENSMUSP00000112674	TRANSLATION	protein_coding	-	CCDS17791.1	1	326	0	0	14.8	461.4	11	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000027957	Slc35a3	ENSMUST00000196335	ENSMUSP00000142374	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	231.8	6	0,-4	-	-	-1	MINOR
ENSMUSG00000027957	Slc35a3	ENSMUST00000153108	ENSMUSP00000123641	TRANSLATION	protein_coding	stop	-	3	212	0	0	0	311.5	7	0,-4	-	-	-1	MINOR
ENSMUSG00000027957	Slc35a3	ENSMUST00000131082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027957	Slc35a3	ENSMUST00000169530	ENSMUSP00000127284	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	61.8	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000047674	Pdha2	ENSMUST00000057860	ENSMUSP00000060774	TRANSLATION	protein_coding	-	CCDS17872.1	-	391	15	1	1.5	395.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000074480	Mex3a	ENSMUST00000172699	ENSMUSP00000134222	TRANSLATION	protein_coding	-	-	2	520	8	0.2	5.3	130.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000054414	Slc30a7	ENSMUST00000067485	ENSMUSP00000065254	TRANSLATION	protein_coding	-	CCDS17783.1	1	378	0	0	7.5	150.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000054414	Slc30a7	ENSMUST00000197847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054414	Slc30a7	ENSMUST00000197333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054414	Slc30a7	ENSMUST00000198571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095251	Tdpoz7	ENSMUST00000091692	ENSMUSP00000089284	TRANSLATION	protein_coding	-	CCDS50981.1	-	340	0	1	0.5	98.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033900	Map9	ENSMUST00000193559	ENSMUSP00000142014	TRANSLATION	protein_coding	stop	-	1	538	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033900	Map9	ENSMUST00000192595	ENSMUSP00000141828	TRANSLATION	protein_coding	stop	-	1	357	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033900	Map9	ENSMUST00000195471	ENSMUSP00000141282	TRANSLATION	protein_coding	stop	-	5	517	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033900	Map9	ENSMUST00000195793	ENSMUSP00000141231	TRANSLATION	protein_coding	start/stop	-	5	92	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033900	Map9	ENSMUST00000194622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033900	Map9	ENSMUST00000091014	ENSMUSP00000088535	TRANSLATION	protein_coding	-	CCDS38461.1	5	646	0	0	1.5	25.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033900	Map9	ENSMUST00000195640	ENSMUSP00000142206	TRANSLATION	protein_coding	-	CCDS38461.1	1	646	0	0	1.5	25.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028104	Polr3gl	ENSMUST00000141579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028104	Polr3gl	ENSMUST00000131641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028104	Polr3gl	ENSMUST00000091924	ENSMUSP00000089544	TRANSLATION	protein_coding	-	CCDS17641.1	1	218	0	0	7.6	131.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000028104	Polr3gl	ENSMUST00000145001	ENSMUSP00000118943	TRANSLATION	protein_coding	-	CCDS79982.1	3	148	0	0	0.5	68.6	0	-4,-7	-	-	2.238	MINOR
ENSMUSG00000074489	Bglap3	ENSMUST00000107542	ENSMUSP00000103166	TRANSLATION	protein_coding	-	CCDS17472.1	1	95	2	1.2	1.5	0	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000074489	Bglap3	ENSMUST00000152477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074489	Bglap3	ENSMUST00000107543	ENSMUSP00000103167	TRANSLATION	protein_coding	-	CCDS17472.1	1	95	2	1.2	1.5	0	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000074489	Bglap3	ENSMUST00000140259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074489	Bglap3	ENSMUST00000075523	ENSMUSP00000074965	TRANSLATION	protein_coding	-	CCDS17472.1	1	95	2	1.2	1.5	0	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000042165	Gm9774	ENSMUST00000192538	ENSMUSP00000141274	TRANSLATION	protein_coding	-	-	-	407	0	4.5	8.4	225.9	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000042165	Gm9774	ENSMUST00000047300	ENSMUSP00000045065	TRANSLATION	protein_coding	-	-	1	309	0	2	0	225.1	0	-3,-1	-	-	6.954	MINOR
ENSMUSG00000033161	Atp1a1	ENSMUST00000036493	ENSMUSP00000039657	TRANSLATION	protein_coding	-	CCDS17683.1	1	1023	26	21.08	16.2	479.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033161	Atp1a1	ENSMUST00000136340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033161	Atp1a1	ENSMUST00000130649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103523	2210017I01Rik	ENSMUST00000195278	ENSMUSP00000141278	TRANSLATION	protein_coding	-	-	1	95	0	0	0	24.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041984	Rptn	ENSMUST00000045912	ENSMUSP00000044998	TRANSLATION	protein_coding	-	CCDS17581.1	5	1118	4	1	0.5	41.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000087119	Atg4a-ps	ENSMUST00000117271	ENSMUSP00000143291	TRANSLATION	protein_coding	-	-	-	396	0	1	0.5	332.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043164	Tmem212	ENSMUST00000058077	ENSMUSP00000049832	TRANSLATION	protein_coding	-	CCDS50876.1	1	187	0	0	5.2	0	0	1,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000070471	Erich6	ENSMUST00000041115	ENSMUSP00000040882	TRANSLATION	protein_coding	-	CCDS50914.1	5	713	0	0	0.5	214.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000108145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000128061	ENSMUSP00000116345	TRANSLATION	nonsense_mediated_decay	start	-	5	243	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000200245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000141740	ENSMUSP00000117814	TRANSLATION	protein_coding	start	-	1	1586	0	0	0	546.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000195933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000198742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000211820	ENSMUSP00000148720	TRANSLATION	protein_coding	stop	-	5	2864	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000139219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000152564	ENSMUSP00000117808	TRANSLATION	protein_coding	-	CCDS50894.1	5	5005	0	0	0.5	546.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000138950	ENSMUSP00000118092	TRANSLATION	protein_coding	start	-	5	1507	0	0	0	546.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000136287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000140480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000196036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000129787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000146948	ENSMUSP00000121356	TRANSLATION	protein_coding	start	-	5	1711	0	0	0	546.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000148698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000138152	ENSMUSP00000117809	TRANSLATION	protein_coding	start/stop	-	3	227	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000136746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000123916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000143675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000129721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000152881	ENSMUSP00000118366	TRANSLATION	nonsense_mediated_decay	-	-	1	329	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037270	4932438A13Rik	ENSMUST00000057272	ENSMUSP00000060199	TRANSLATION	protein_coding	-	CCDS50894.1	5	5005	0	0	0.5	546.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046688	Tifa	ENSMUST00000164447	ENSMUSP00000126692	TRANSLATION	protein_coding	-	CCDS38628.1	1	184	0	1	5.1	28.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046688	Tifa	ENSMUST00000163775	ENSMUSP00000132309	TRANSLATION	protein_coding	-	CCDS38628.1	1	184	0	1	5.1	28.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046688	Tifa	ENSMUST00000166778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046688	Tifa	ENSMUST00000171621	ENSMUSP00000127700	TRANSLATION	protein_coding	-	CCDS38628.1	1	184	0	1	5.1	28.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046688	Tifa	ENSMUST00000054483	ENSMUSP00000054036	TRANSLATION	protein_coding	-	CCDS38628.1	1	184	0	1	5.1	28.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000027762	Sucnr1	ENSMUST00000029326	ENSMUSP00000029326	TRANSLATION	protein_coding	-	CCDS38442.1	1	317	0	0.6	1.5	123.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027762	Sucnr1	ENSMUST00000195544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068732	Tmem167b	ENSMUST00000106622	ENSMUSP00000102233	TRANSLATION	protein_coding	-	-	1	122	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000068732	Tmem167b	ENSMUST00000090546	ENSMUSP00000088035	TRANSLATION	protein_coding	-	CCDS38601.1	1	74	0	0	17.5	41.3	0	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000046793	Gpr61	ENSMUST00000116284	ENSMUSP00000111988	TRANSLATION	nonsense_mediated_decay	-	-	1	449	0	0.32	6.3	122.2	7	-4,-2	-	-	-1	MINOR
ENSMUSG00000046793	Gpr61	ENSMUST00000062028	ENSMUSP00000055557	TRANSLATION	protein_coding	-	CCDS17752.1	1	449	0	0.32	6.3	122.2	7	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000027832	Ptx3	ENSMUST00000182521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027832	Ptx3	ENSMUST00000029421	ENSMUSP00000029421	TRANSLATION	protein_coding	-	CCDS17392.1	1	381	0	0.6	1.5	94.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063052	Lrrc40	ENSMUST00000150525	ENSMUSP00000116475	TRANSLATION	nonsense_mediated_decay	-	-	1	131	0	1.264	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063052	Lrrc40	ENSMUST00000199290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063052	Lrrc40	ENSMUST00000072080	ENSMUSP00000071956	TRANSLATION	protein_coding	-	CCDS17935.1	1	602	0	10.964	3.9	174.9	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000063052	Lrrc40	ENSMUST00000123028	ENSMUSP00000121905	TRANSLATION	nonsense_mediated_decay	start	-	5	68	0	0.864	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063052	Lrrc40	ENSMUST00000131518	ENSMUSP00000121417	TRANSLATION	nonsense_mediated_decay	start	-	3	114	0	1.264	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063052	Lrrc40	ENSMUST00000132530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063052	Lrrc40	ENSMUST00000156597	ENSMUSP00000117093	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0.664	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063052	Lrrc40	ENSMUST00000200540	ENSMUSP00000143518	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0.664	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068744	Psrc1	ENSMUST00000090561	ENSMUSP00000088049	TRANSLATION	protein_coding	-	CCDS17758.1	1	329	0	0	1.5	38.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068744	Psrc1	ENSMUST00000148509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068744	Psrc1	ENSMUST00000130906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068744	Psrc1	ENSMUST00000145141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068744	Psrc1	ENSMUST00000133405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068744	Psrc1	ENSMUST00000196430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068744	Psrc1	ENSMUST00000143309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068744	Psrc1	ENSMUST00000102629	ENSMUSP00000099689	TRANSLATION	protein_coding	-	CCDS17758.1	1	329	0	0	1.5	38.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068744	Psrc1	ENSMUST00000128962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068744	Psrc1	ENSMUST00000126461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068744	Psrc1	ENSMUST00000128089	ENSMUSP00000115634	TRANSLATION	protein_coding	stop	-	2	172	0	0	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028140	Mrpl9	ENSMUST00000196143	ENSMUSP00000142859	TRANSLATION	protein_coding	-	-	1	268	0	5.05	0	0	0	-4,-1	-	-	4.002	MINOR
ENSMUSG00000028140	Mrpl9	ENSMUST00000199009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028140	Mrpl9	ENSMUST00000029786	ENSMUSP00000029786	TRANSLATION	protein_coding	-	CCDS17593.1	1	265	0	6.05	1.5	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000027939	Nup210l	ENSMUST00000029548	ENSMUSP00000029548	TRANSLATION	protein_coding	-	CCDS50969.1	5	1881	0	0	1.5	30.7	1	0,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000027939	Nup210l	ENSMUST00000200410	ENSMUSP00000143368	TRANSLATION	protein_coding	-	-	5	1881	0	0	1.5	30.7	1	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000027931	Npr1	ENSMUST00000124760	ENSMUSP00000118023	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	0.75	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000027931	Npr1	ENSMUST00000146991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027931	Npr1	ENSMUST00000152510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027931	Npr1	ENSMUST00000029540	ENSMUSP00000029540	TRANSLATION	protein_coding	-	CCDS17529.1	1	1057	0	16.12	1.5	552.1	1	4,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000027931	Npr1	ENSMUST00000142243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028001	Fga	ENSMUST00000029630	ENSMUSP00000029630	TRANSLATION	protein_coding	-	CCDS17431.1	1	557	0	3.6	0.5	251.1	0	4,-1	-	-	4.002	MINOR
ENSMUSG00000028001	Fga	ENSMUST00000166581	ENSMUSP00000133117	TRANSLATION	protein_coding	-	CCDS50939.1	5	789	10	4.6	0.5	498.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000042737	Dpm3	ENSMUST00000107462	ENSMUSP00000103086	TRANSLATION	protein_coding	-	CCDS38487.1	3	92	0	0	9.5	105.7	1	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000042737	Dpm3	ENSMUST00000040824	ENSMUSP00000040860	TRANSLATION	protein_coding	-	CCDS38487.1	1	92	0	0	9.5	105.7	1	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000042737	Dpm3	ENSMUST00000137975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028159	Dapp1	ENSMUST00000154716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028159	Dapp1	ENSMUST00000199541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028159	Dapp1	ENSMUST00000184222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028159	Dapp1	ENSMUST00000136613	ENSMUSP00000119634	TRANSLATION	protein_coding	-	CCDS80029.1	1	239	8	5.3	0.5	62.3	0	-4,-5	-	-	11.844	MINOR
ENSMUSG00000028159	Dapp1	ENSMUST00000029806	ENSMUSP00000029806	TRANSLATION	protein_coding	-	CCDS17864.1	1	280	8	6.3	7.5	131.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028159	Dapp1	ENSMUST00000200596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028159	Dapp1	ENSMUST00000124827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027663	Zmat3	ENSMUST00000029199	ENSMUSP00000029199	TRANSLATION	protein_coding	-	CCDS17293.1	5	290	12	0.94	9.5	96.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000027663	Zmat3	ENSMUST00000139660	ENSMUSP00000141511	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027663	Zmat3	ENSMUST00000195055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027663	Zmat3	ENSMUST00000168566	ENSMUSP00000131317	TRANSLATION	protein_coding	-	CCDS17293.1	1	290	12	0.94	9.5	96.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028167	Bdh2	ENSMUST00000198491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028167	Bdh2	ENSMUST00000120397	ENSMUSP00000112683	TRANSLATION	protein_coding	-	CCDS51073.1	5	255	56	7.448	1.5	170.1	0	-4,-6	-	-	18.168	MINOR
ENSMUSG00000028167	Bdh2	ENSMUST00000154869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028167	Bdh2	ENSMUST00000029817	ENSMUSP00000029817	TRANSLATION	protein_coding	-	CCDS17853.1	1	245	56	7.25	12.8	170.1	0	-2,-5	-	-	21.604	PRINCIPAL:1
ENSMUSG00000040086	Tnni3k	ENSMUST00000146952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040086	Tnni3k	ENSMUST00000064076	ENSMUSP00000070561	TRANSLATION	protein_coding	-	CCDS17928.1	1	834	19	14.96	0.5	379.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040086	Tnni3k	ENSMUST00000143410	ENSMUSP00000122478	TRANSLATION	nonsense_mediated_decay	-	-	1	675	19	13.13	0	355.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041734	Kirrel	ENSMUST00000159976	ENSMUSP00000125525	TRANSLATION	protein_coding	-	CCDS17450.1	1	789	0	9.66	1.5	123.4	4	-4,-7	-	-	11.97	PRINCIPAL:2
ENSMUSG00000041734	Kirrel	ENSMUST00000041732	ENSMUSP00000043756	TRANSLATION	protein_coding	-	-	1	634	0	9.66	0	123.9	4	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000041734	Kirrel	ENSMUST00000107618	ENSMUSP00000103243	TRANSLATION	protein_coding	-	CCDS17450.1	5	789	0	9.66	1.5	123.4	4	-4,-7	-	-	11.97	PRINCIPAL:2
ENSMUSG00000058897	Col25a1	ENSMUST00000198205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058897	Col25a1	ENSMUST00000197950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058897	Col25a1	ENSMUST00000183368	ENSMUSP00000138875	TRANSLATION	nonsense_mediated_decay	-	-	5	593	0	10.778	0	174	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058897	Col25a1	ENSMUST00000106353	ENSMUSP00000101960	TRANSLATION	protein_coding	-	CCDS38636.1	5	640	0	14.039	0.5	212.8	0	-4,-7	-	-	8.13	MINOR
ENSMUSG00000058897	Col25a1	ENSMUST00000238846	ENSMUSP00000158974	TRANSLATION	protein_coding	-	-	-	698	0	15.974	0	201	0	-4,-7	-	-	11.292	ALTERNATIVE:2
ENSMUSG00000058897	Col25a1	ENSMUST00000143830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058897	Col25a1	ENSMUST00000080335	ENSMUSP00000079210	TRANSLATION	protein_coding	-	CCDS38637.1	5	666	0	15.574	1.5	211.8	0	-4,-7	-	-	11.142	PRINCIPAL:2
ENSMUSG00000028011	Tdo2	ENSMUST00000151089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028011	Tdo2	ENSMUST00000193879	ENSMUSP00000141237	TRANSLATION	protein_coding	-	-	1	387	32	9.75	0	580.1	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028011	Tdo2	ENSMUST00000029645	ENSMUSP00000029645	TRANSLATION	protein_coding	-	CCDS17427.1	1	406	32	9.75	5.3	580.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028011	Tdo2	ENSMUST00000137974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091685	Gm17359	ENSMUST00000164216	ENSMUSP00000130702	TRANSLATION	protein_coding	-	CCDS50933.1	5	189	0	0	0.5	186.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091685	Gm17359	ENSMUST00000195157	ENSMUSP00000141352	TRANSLATION	protein_coding	stop	-	2	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091685	Gm17359	ENSMUST00000199658	ENSMUSP00000142709	TRANSLATION	protein_coding	-	-	5	487	0	0	0.5	164.5	0	-4,-5	-	-	4.662	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000194006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000191805	ENSMUSP00000141487	TRANSLATION	protein_coding	-	CCDS38423.1	5	335	0	1.6	7.5	78.8	0	-4,-5	-	-	9.54	PRINCIPAL:1
ENSMUSG00000025762	Larp1b	ENSMUST00000026862	ENSMUSP00000026862	TRANSLATION	protein_coding	-	-	1	102	0	1.066	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000099121	ENSMUSP00000096721	TRANSLATION	protein_coding	-	-	1	248	0	4.33	0	0	0	-4,-6	-	-	6	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000191882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000197214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000191998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000200432	ENSMUSP00000143244	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000199797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000191872	ENSMUSP00000142106	TRANSLATION	protein_coding	-	-	1	288	0	1.6	0	78.8	0	-4,-5	-	-	6.54	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000192456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025762	Larp1b	ENSMUST00000048490	ENSMUSP00000037127	TRANSLATION	protein_coding	-	-	1	541	0	1.6	0	78.8	0	-4,-7	-	-	6.54	MINOR
ENSMUSG00000025762	Larp1b	ENSMUST00000065411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025762	Larp1b	ENSMUST00000197092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027797	Dclk1	ENSMUST00000198821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027797	Dclk1	ENSMUST00000198757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027797	Dclk1	ENSMUST00000200348	ENSMUSP00000143672	TRANSLATION	protein_coding	stop	-	-	111	0	1	0	40.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000070418	ENSMUSP00000070292	TRANSLATION	protein_coding	-	CCDS50910.1	5	422	18	8.75	11.7	253.3	0	-4,-5	-	-	9.628	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000167204	ENSMUSP00000129334	TRANSLATION	protein_coding	-	CCDS50909.1	1	363	0	5.6	7.8	142.4	0	-4,-5	-	-	2.304	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000198412	ENSMUSP00000142637	TRANSLATION	protein_coding	-	-	5	432	18	8.99	12.8	252.4	0	-4,-5	-	-	10	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000054237	ENSMUSP00000050034	TRANSLATION	protein_coding	-	CCDS17359.1	1	756	18	13.09	0.5	395.7	0	-4,-5	-	-	18	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000199702	ENSMUSP00000143507	TRANSLATION	protein_coding	-	-	1	421	18	8.75	11.7	253.3	0	-4,-5	-	-	9.628	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000197870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027797	Dclk1	ENSMUST00000200352	ENSMUSP00000142840	TRANSLATION	protein_coding	-	-	2	452	18	8.75	0	253.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000198154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027797	Dclk1	ENSMUST00000196745	ENSMUSP00000143659	TRANSLATION	protein_coding	-	-	1	739	18	13.09	7.8	394.8	0	-4,-5	-	-	20.25	PRINCIPAL:1
ENSMUSG00000027797	Dclk1	ENSMUST00000199585	ENSMUSP00000142698	TRANSLATION	protein_coding	-	CCDS79908.1	1	56	0	1.5	5.1	0	0	-4,-5	-	-	1.388	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000199169	ENSMUSP00000143563	TRANSLATION	protein_coding	-	-	2	382	18	8.75	0	253.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000027797	Dclk1	ENSMUST00000198437	ENSMUSP00000143016	TRANSLATION	protein_coding	-	CCDS79909.1	1	449	18	8.99	1.5	253.3	0	-4,-5	-	-	6.168	MINOR
ENSMUSG00000027865	Gdap2	ENSMUST00000029459	ENSMUSP00000029459	TRANSLATION	protein_coding	-	CCDS17675.1	1	498	0	5.35	5.1	214.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000027865	Gdap2	ENSMUST00000150223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027865	Gdap2	ENSMUST00000106997	ENSMUSP00000102610	TRANSLATION	protein_coding	-	-	2	546	0	5.35	0	214.7	0	-4,-6	-	-	12	MINOR
ENSMUSG00000027865	Gdap2	ENSMUST00000197797	ENSMUSP00000143195	TRANSLATION	protein_coding	start	-	1	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027865	Gdap2	ENSMUST00000200036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048796	Cyb561d1	ENSMUST00000155099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048796	Cyb561d1	ENSMUST00000065664	ENSMUSP00000070361	TRANSLATION	protein_coding	-	CCDS38599.1	1	171	0	0	6.4	119.9	5	-4,-5	-	-	7.785	MINOR
ENSMUSG00000048796	Cyb561d1	ENSMUST00000106654	ENSMUSP00000102265	TRANSLATION	protein_coding	-	CCDS38599.1	1	171	0	0	6.4	119.9	5	-4,-5	-	-	7.785	MINOR
ENSMUSG00000048796	Cyb561d1	ENSMUST00000106655	ENSMUSP00000102266	TRANSLATION	protein_coding	-	CCDS38598.1	1	229	0	0	7.5	131.7	6	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000039988	Ankrd13c	ENSMUST00000197872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039988	Ankrd13c	ENSMUST00000199574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039988	Ankrd13c	ENSMUST00000199727	ENSMUSP00000143432	TRANSLATION	nonsense_mediated_decay	-	-	1	249	0	2.35	0	41.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039988	Ankrd13c	ENSMUST00000196480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039988	Ankrd13c	ENSMUST00000198736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039988	Ankrd13c	ENSMUST00000164582	ENSMUSP00000125831	TRANSLATION	protein_coding	-	CCDS17933.1	1	541	0	2.43	1.5	273.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039988	Ankrd13c	ENSMUST00000040787	ENSMUSP00000038662	TRANSLATION	protein_coding	-	CCDS17933.1	5	541	0	2.43	1.5	273.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039988	Ankrd13c	ENSMUST00000200516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039988	Ankrd13c	ENSMUST00000199008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039988	Ankrd13c	ENSMUST00000199757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051431	Gpr87	ENSMUST00000199833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051431	Gpr87	ENSMUST00000056898	ENSMUSP00000059272	TRANSLATION	protein_coding	-	-	-	359	0	1	0	124.5	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051431	Gpr87	ENSMUST00000200095	ENSMUSP00000143683	TRANSLATION	protein_coding	-	CCDS79914.1	1	358	0	0.9	4.7	124.5	7	-4,-6	-	-	12.4	PRINCIPAL:2
ENSMUSG00000040809	Chil3	ENSMUST00000063062	ENSMUSP00000053923	TRANSLATION	protein_coding	-	CCDS17718.1	1	398	2	8.792	0.5	276	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000040809	Chil3	ENSMUST00000149836	ENSMUSP00000121823	TRANSLATION	protein_coding	start/stop	-	3	58	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040809	Chil3	ENSMUST00000129563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044080	S100a1	ENSMUST00000060738	ENSMUSP00000058237	TRANSLATION	protein_coding	-	CCDS38503.1	1	94	12	2.33	19.5	100.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044080	S100a1	ENSMUST00000107340	ENSMUSP00000102963	TRANSLATION	protein_coding	-	-	2	63	7	1.462	0	74.7	0	-4,-5	-	-	10.872	MINOR
ENSMUSG00000027861	Casq2	ENSMUST00000159521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027861	Casq2	ENSMUST00000029454	ENSMUSP00000029454	TRANSLATION	protein_coding	-	CCDS51023.1	1	415	16	9.25	0.5	741.6	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000027861	Casq2	ENSMUST00000164123	ENSMUSP00000131232	TRANSLATION	protein_coding	stop	-	5	312	13	7.25	0	578.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000027861	Casq2	ENSMUST00000165540	ENSMUSP00000130482	TRANSLATION	protein_coding	-	-	1	418	16	9.25	0	733.7	0	3,-2	-	-	17.526	ALTERNATIVE:2
ENSMUSG00000027861	Casq2	ENSMUST00000159833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056025	Clca3a1	ENSMUST00000029932	ENSMUSP00000029932	TRANSLATION	nonsense_mediated_decay	-	-	1	513	5	0	0.5	510	0	4,-1	-	-	-1	MINOR
ENSMUSG00000056025	Clca3a1	ENSMUST00000059091	ENSMUSP00000054526	TRANSLATION	protein_coding	-	CCDS17886.1	1	902	5	0	0.5	513.8	0	4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000040269	Mrps28	ENSMUST00000042148	ENSMUSP00000038305	TRANSLATION	protein_coding	-	CCDS17233.1	1	186	0	3	1.7	183.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000027790	Sis	ENSMUST00000167334	ENSMUSP00000129116	TRANSLATION	protein_coding	-	CCDS38454.1	1	1818	0	40.23	0.5	1325.3	1	0,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027790	Sis	ENSMUST00000191870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027790	Sis	ENSMUST00000170445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027790	Sis	ENSMUST00000094190	ENSMUSP00000091742	TRANSLATION	protein_coding	-	CCDS38454.1	2	1818	0	40.23	0.5	1325.3	1	0,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040998	Npnt	ENSMUST00000117456	ENSMUSP00000112816	TRANSLATION	protein_coding	-	CCDS71321.1	1	457	16	4.49	0.5	156.4	0	-4,-6	-	-	8.496	MINOR
ENSMUSG00000040998	Npnt	ENSMUST00000117164	ENSMUSP00000113419	TRANSLATION	protein_coding	-	CCDS71322.1	1	592	21	6.73	0.5	184.5	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000040998	Npnt	ENSMUST00000093971	ENSMUSP00000091505	TRANSLATION	protein_coding	-	CCDS71323.1	1	609	21	6.73	0.5	184.5	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000040998	Npnt	ENSMUST00000042729	ENSMUSP00000040071	TRANSLATION	protein_coding	-	CCDS17846.1	1	578	21	6.59	0.5	184.5	0	4,-1	-	-	17.718	PRINCIPAL:4
ENSMUSG00000040998	Npnt	ENSMUST00000117811	ENSMUSP00000113752	TRANSLATION	protein_coding	-	-	5	532	21	6.59	0	184.5	0	4,-1	-	-	17.718	ALTERNATIVE:2
ENSMUSG00000040998	Npnt	ENSMUST00000042744	ENSMUSP00000040684	TRANSLATION	protein_coding	-	CCDS17845.1	1	561	21	6.59	0.5	184.5	0	4,-1	-	-	17.718	ALTERNATIVE:2
ENSMUSG00000040998	Npnt	ENSMUST00000132732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027834	Serpini1	ENSMUST00000029423	ENSMUSP00000029423	TRANSLATION	protein_coding	-	CCDS17415.1	1	410	0	8	9.7	373.7	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027834	Serpini1	ENSMUST00000161776	ENSMUSP00000123845	TRANSLATION	protein_coding	stop	-	3	207	0	3	0	170.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000027834	Serpini1	ENSMUST00000195285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027834	Serpini1	ENSMUST00000161695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028020	Glrb	ENSMUST00000029654	ENSMUSP00000029654	TRANSLATION	protein_coding	-	CCDS17424.1	1	496	5	6.3	13.5	303.8	4	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028020	Glrb	ENSMUST00000107743	ENSMUSP00000103372	TRANSLATION	protein_coding	-	-	5	307	5	4.9	0	211.8	1	4,-1	-	-	8.678	MINOR
ENSMUSG00000028020	Glrb	ENSMUST00000194085	ENSMUSP00000142306	TRANSLATION	protein_coding	-	-	1	445	3	5.3	4	244	3	4,-1	-	-	10.374	MINOR
ENSMUSG00000028020	Glrb	ENSMUST00000132330	ENSMUSP00000115014	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000028020	Glrb	ENSMUST00000193031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028020	Glrb	ENSMUST00000135043	ENSMUSP00000116604	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000044667	Plppr4	ENSMUST00000197743	ENSMUSP00000143753	TRANSLATION	protein_coding	stop	-	5	707	0	0	2.4	27.5	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000044667	Plppr4	ENSMUST00000061071	ENSMUSP00000052306	TRANSLATION	protein_coding	-	CCDS17795.1	1	766	0	0	3.9	63	6	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000044667	Plppr4	ENSMUST00000125664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027999	Pla2g12a	ENSMUST00000196736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027999	Pla2g12a	ENSMUST00000196838	ENSMUSP00000143771	TRANSLATION	nonsense_mediated_decay	start	-	3	129	2	0	0	213.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027999	Pla2g12a	ENSMUST00000061165	ENSMUSP00000053651	TRANSLATION	protein_coding	-	CCDS17837.1	1	153	2	0	0.5	217.4	0	-4,-5	-	-	3.122	MINOR
ENSMUSG00000027999	Pla2g12a	ENSMUST00000029629	ENSMUSP00000029629	TRANSLATION	protein_coding	-	CCDS17836.1	1	192	2	0	0.5	298.7	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000050092	Sprr2b	ENSMUST00000061038	ENSMUSP00000058131	TRANSLATION	protein_coding	-	CCDS38509.1	1	98	0	0	0.5	50.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027860	Vangl1	ENSMUST00000159388	ENSMUSP00000125043	TRANSLATION	protein_coding	-	-	5	393	0	0	0	551.9	4	-4,-5	-	-	0	MINOR
ENSMUSG00000027860	Vangl1	ENSMUST00000029453	ENSMUSP00000029453	TRANSLATION	protein_coding	-	CCDS17686.1	1	526	0	0	9.5	858	4	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027860	Vangl1	ENSMUST00000161722	ENSMUSP00000124642	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027860	Vangl1	ENSMUST00000159586	ENSMUSP00000124874	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	138.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000027860	Vangl1	ENSMUST00000168312	ENSMUSP00000126254	TRANSLATION	protein_coding	-	-	1	476	0	0	0	550.5	4	-4,-5	-	-	0	MINOR
ENSMUSG00000027860	Vangl1	ENSMUST00000162361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027860	Vangl1	ENSMUST00000160226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027860	Vangl1	ENSMUST00000161021	ENSMUSP00000125484	TRANSLATION	protein_coding	start	-	3	253	0	0	0	383.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000080907	4930455H04Rik	ENSMUST00000117592	ENSMUSP00000113404	TRANSLATION	protein_coding	-	-	1	58	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000049404	Rarres1	ENSMUST00000054825	ENSMUSP00000056728	TRANSLATION	protein_coding	-	CCDS57216.1	1	283	0	2.97	0.5	333.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042212	Sprr2d	ENSMUST00000047477	ENSMUSP00000039821	TRANSLATION	protein_coding	-	CCDS38510.1	1	85	0	0	0.5	55.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028032	Papss1	ENSMUST00000196638	ENSMUSP00000143211	TRANSLATION	nonsense_mediated_decay	-	-	3	42	3	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028032	Papss1	ENSMUST00000199878	ENSMUSP00000142533	TRANSLATION	protein_coding	-	CCDS80023.1	1	603	41	11	10.6	656.5	0	-4,-2	-	-	19.44	MINOR
ENSMUSG00000028032	Papss1	ENSMUST00000196408	ENSMUSP00000143225	TRANSLATION	protein_coding	stop	-	3	37	3	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028032	Papss1	ENSMUST00000029666	ENSMUSP00000029666	TRANSLATION	protein_coding	-	CCDS38641.1	1	624	41	11.75	10.8	656.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000028032	Papss1	ENSMUST00000200527	ENSMUSP00000142616	TRANSLATION	protein_coding	-	CCDS80023.1	5	603	41	11	10.6	656.5	0	-4,-2	-	-	19.44	MINOR
ENSMUSG00000028032	Papss1	ENSMUST00000197402	ENSMUSP00000143526	TRANSLATION	nonsense_mediated_decay	-	-	1	42	3	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027854	Sike1	ENSMUST00000151065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027854	Sike1	ENSMUST00000029447	ENSMUSP00000029447	TRANSLATION	protein_coding	-	CCDS17690.1	1	207	0	0	8.8	225.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000027854	Sike1	ENSMUST00000196827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027854	Sike1	ENSMUST00000197601	ENSMUSP00000143074	TRANSLATION	nonsense_mediated_decay	start	-	3	83	0	0	0	91.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027854	Sike1	ENSMUST00000137332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027854	Sike1	ENSMUST00000119450	ENSMUSP00000112886	TRANSLATION	protein_coding	-	-	3	124	0	0	0	114.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036960	Clca2	ENSMUST00000197121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036960	Clca2	ENSMUST00000040465	ENSMUSP00000036029	TRANSLATION	protein_coding	-	CCDS17890.1	1	942	0	0	0.5	402.9	0	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036960	Clca2	ENSMUST00000198993	ENSMUSP00000143161	TRANSLATION	protein_coding	-	-	1	674	0	0	0.5	402.9	0	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000040329	Il7	ENSMUST00000192202	ENSMUSP00000141508	TRANSLATION	protein_coding	-	CCDS84608.1	1	113	0	2.03	0.5	140	0	-4,-5	-	-	9.576	MINOR
ENSMUSG00000040329	Il7	ENSMUST00000191681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040329	Il7	ENSMUST00000194279	ENSMUSP00000141845	TRANSLATION	protein_coding	-	CCDS50859.1	1	154	0	2.63	3.9	157.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000040329	Il7	ENSMUST00000168269	ENSMUSP00000126219	TRANSLATION	protein_coding	-	CCDS84608.1	1	113	0	2.03	0.5	140	0	-4,-5	-	-	9.576	MINOR
ENSMUSG00000040329	Il7	ENSMUST00000194184	ENSMUSP00000141827	TRANSLATION	protein_coding	-	CCDS84608.1	1	113	0	2.03	0.5	140	0	-4,-5	-	-	9.576	MINOR
ENSMUSG00000068887	Lce1j	ENSMUST00000107304	ENSMUSP00000102925	TRANSLATION	protein_coding	-	CCDS59647.1	-	139	0	0	0.5	30.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068887	Lce1j	ENSMUST00000186525	ENSMUSP00000140507	TRANSLATION	protein_coding	-	CCDS59647.1	3	139	0	0	0.5	30.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000103350	Tdpoz6	ENSMUST00000193565	ENSMUSP00000142038	TRANSLATION	protein_coding	-	-	-	336	0	1	0	97.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028007	Snx7	ENSMUST00000169812	ENSMUSP00000128007	TRANSLATION	protein_coding	start	-	1	386	0	3	0	89.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028007	Snx7	ENSMUST00000167877	ENSMUSP00000125804	TRANSLATION	protein_coding	start	-	5	362	0	2	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028007	Snx7	ENSMUST00000029639	ENSMUSP00000029639	TRANSLATION	protein_coding	-	CCDS38615.2	1	445	0	3	0.5	89.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028007	Snx7	ENSMUST00000198499	ENSMUSP00000143230	TRANSLATION	protein_coding	-	-	5	387	0	3	4.6	89.5	0	-4,-5	-	-	13	ALTERNATIVE:1
ENSMUSG00000028007	Snx7	ENSMUST00000196421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028041	Adam15	ENSMUST00000155868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028041	Adam15	ENSMUST00000139705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028041	Adam15	ENSMUST00000134590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028041	Adam15	ENSMUST00000156250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028041	Adam15	ENSMUST00000184651	ENSMUSP00000139147	TRANSLATION	nonsense_mediated_decay	-	-	1	864	18	8.655	0.5	405.7	1	1,-3	-	-	-1	MINOR
ENSMUSG00000028041	Adam15	ENSMUST00000155295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028041	Adam15	ENSMUST00000144608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028041	Adam15	ENSMUST00000029676	ENSMUSP00000029676	TRANSLATION	protein_coding	-	CCDS17502.1	1	864	18	8.655	0.5	405.7	1	1,-3	-	-	18	PRINCIPAL:4
ENSMUSG00000028041	Adam15	ENSMUST00000107448	ENSMUSP00000103072	TRANSLATION	protein_coding	-	-	5	839	18	8.655	0.5	405.7	1	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000028041	Adam15	ENSMUST00000148068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028041	Adam15	ENSMUST00000107446	ENSMUSP00000103070	TRANSLATION	protein_coding	-	-	5	448	7	4.855	0	228.7	0	1,-3	-	-	0	MINOR
ENSMUSG00000028041	Adam15	ENSMUST00000074582	ENSMUSP00000074167	TRANSLATION	protein_coding	-	CCDS17503.1	1	815	18	8.655	0.5	405.7	1	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000028041	Adam15	ENSMUST00000134839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074579	Lekr1	ENSMUST00000161534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074579	Lekr1	ENSMUST00000195559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074579	Lekr1	ENSMUST00000161851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074579	Lekr1	ENSMUST00000177434	ENSMUSP00000158835	TRANSLATION	protein_coding	-	-	5	690	2	0	3.9	0	0	-4,-5	-	-	3	ALTERNATIVE:2
ENSMUSG00000074579	Lekr1	ENSMUST00000161794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074579	Lekr1	ENSMUST00000099075	ENSMUSP00000096674	TRANSLATION	protein_coding	-	CCDS17389.1	1	116	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:2
ENSMUSG00000074579	Lekr1	ENSMUST00000107848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046519	Golph3l	ENSMUST00000176674	ENSMUSP00000134885	TRANSLATION	protein_coding	start	-	5	299	0	4.13	0	125.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000098861	ENSMUSP00000096460	TRANSLATION	protein_coding	-	CCDS57234.1	1	280	0	4.13	0.5	163	0	-4,-5	-	-	8.07	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000060323	ENSMUSP00000058654	TRANSLATION	protein_coding	-	CCDS57235.1	1	280	0	4.33	0.5	175.2	0	-4,-5	-	-	9.198	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000177389	ENSMUSP00000135406	TRANSLATION	protein_coding	start	-	1	280	0	4.33	0.5	175.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000176541	ENSMUSP00000135056	TRANSLATION	nonsense_mediated_decay	start	-	1	171	0	1.866	0	61.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000176755	ENSMUSP00000134804	TRANSLATION	protein_coding	start	-	1	278	0	4.13	0.5	163	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046519	Golph3l	ENSMUST00000177390	ENSMUSP00000134799	TRANSLATION	protein_coding	-	CCDS17616.2	1	343	0	5.13	0.5	195.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046519	Golph3l	ENSMUST00000177399	ENSMUSP00000134998	TRANSLATION	protein_coding	start	-	3	181	0	2	0	85.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040213	Kyat3	ENSMUST00000137623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040213	Kyat3	ENSMUST00000106218	ENSMUSP00000101825	TRANSLATION	protein_coding	-	CCDS80040.1	1	455	18	11.03	7.5	176.6	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000040213	Kyat3	ENSMUST00000128096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040213	Kyat3	ENSMUST00000196928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040213	Kyat3	ENSMUST00000199519	ENSMUSP00000143531	TRANSLATION	protein_coding	stop	-	3	194	10	4.58	0	81.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040213	Kyat3	ENSMUST00000129775	ENSMUSP00000121687	TRANSLATION	nonsense_mediated_decay	-	-	1	71	3	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040213	Kyat3	ENSMUST00000044392	ENSMUSP00000041675	TRANSLATION	protein_coding	-	CCDS17881.1	1	420	18	10.58	5.3	176.6	0	-4,-5	-	-	19.086	MINOR
ENSMUSG00000040213	Kyat3	ENSMUST00000198957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068917	Clk2	ENSMUST00000153255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068917	Clk2	ENSMUST00000133323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068917	Clk2	ENSMUST00000148265	ENSMUSP00000122634	TRANSLATION	protein_coding	stop	-	5	249	15	3	0	34.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000068917	Clk2	ENSMUST00000138822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068917	Clk2	ENSMUST00000128318	ENSMUSP00000115761	TRANSLATION	nonsense_mediated_decay	-	-	5	136	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000068917	Clk2	ENSMUST00000121212	ENSMUSP00000113390	TRANSLATION	protein_coding	-	CCDS17491.1	1	499	18	9.25	7.5	171	0	-4,-2	-	-	20.502	PRINCIPAL:3
ENSMUSG00000068917	Clk2	ENSMUST00000090927	ENSMUSP00000088445	TRANSLATION	protein_coding	-	CCDS50958.1	1	498	18	9.25	7.5	171	0	-4,-2	-	-	20.502	ALTERNATIVE:1
ENSMUSG00000068917	Clk2	ENSMUST00000132830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068917	Clk2	ENSMUST00000152205	ENSMUSP00000122202	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000068917	Clk2	ENSMUST00000139221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068917	Clk2	ENSMUST00000121931	ENSMUSP00000113861	TRANSLATION	protein_coding	-	-	5	500	18	9.5	7.5	171	0	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000038354	Ankrd35	ENSMUST00000122960	ENSMUSP00000115316	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038354	Ankrd35	ENSMUST00000048427	ENSMUSP00000047244	TRANSLATION	protein_coding	-	CCDS38558.1	1	996	0	5.8	0.5	121	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038354	Ankrd35	ENSMUST00000130429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090581	Vmn2r6	ENSMUST00000176481	ENSMUSP00000135148	TRANSLATION	protein_coding	-	-	5	913	0	3.97	0.5	501.3	9	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000090581	Vmn2r6	ENSMUST00000165012	ENSMUSP00000131831	TRANSLATION	protein_coding	-	CCDS50923.1	5	824	0	3.44	0.5	499.1	9	-4,-5	-	-	10.806	MINOR
ENSMUSG00000027748	Trpc4	ENSMUST00000199399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027748	Trpc4	ENSMUST00000029311	ENSMUSP00000029311	TRANSLATION	protein_coding	-	CCDS17350.1	1	974	0	0.92	1.5	211.9	9	-4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000027748	Trpc4	ENSMUST00000200341	ENSMUSP00000142921	TRANSLATION	nonsense_mediated_decay	-	-	1	400	0	0.36	0	98.2	3	-4,-1	-	-	-1	MINOR
ENSMUSG00000027748	Trpc4	ENSMUST00000199359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027748	Trpc4	ENSMUST00000200048	ENSMUSP00000143593	TRANSLATION	protein_coding	-	CCDS79904.1	1	890	0	0.92	1.5	211.9	9	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027748	Trpc4	ENSMUST00000198444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068921	Dap3	ENSMUST00000090938	ENSMUSP00000088456	TRANSLATION	protein_coding	-	CCDS17486.2	1	396	16	11.59	1.5	296	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000068921	Dap3	ENSMUST00000188259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068921	Dap3	ENSMUST00000173094	ENSMUSP00000133486	TRANSLATION	protein_coding	start	-	5	255	16	8.24	0	185.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000174077	ENSMUSP00000134433	TRANSLATION	protein_coding	stop	-	5	212	10	6.76	0	146.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000173135	ENSMUSP00000134422	TRANSLATION	protein_coding	-	-	5	391	16	11.59	0.5	296	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000068921	Dap3	ENSMUST00000173021	ENSMUSP00000133314	TRANSLATION	protein_coding	stop	-	5	200	10	6.43	0	131.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000107491	ENSMUSP00000103115	TRANSLATION	protein_coding	-	CCDS50955.1	1	366	16	10.59	1.5	256.5	0	-4,0	-	-	13.632	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000172790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068921	Dap3	ENSMUST00000173711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068921	Dap3	ENSMUST00000174402	ENSMUSP00000133395	TRANSLATION	protein_coding	stop	-	5	165	10	5.1	0	100.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000174491	ENSMUSP00000134165	TRANSLATION	protein_coding	stop	-	2	66	0	1.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000174571	ENSMUSP00000133349	TRANSLATION	protein_coding	start	-	3	217	13	6.75	0	144.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068921	Dap3	ENSMUST00000172942	ENSMUSP00000134145	TRANSLATION	protein_coding	stop	-	5	133	10	3.68	0	84.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000000794	Kcnn3	ENSMUST00000000811	ENSMUSP00000000811	TRANSLATION	protein_coding	-	CCDS38495.1	1	732	0	3.35	1.5	342	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000794	Kcnn3	ENSMUST00000124584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078578	Ube2d3	ENSMUST00000197814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078578	Ube2d3	ENSMUST00000196564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078578	Ube2d3	ENSMUST00000196446	ENSMUSP00000142974	TRANSLATION	protein_coding	stop	-	5	147	0	4.74	19.5	178.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078578	Ube2d3	ENSMUST00000196248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078578	Ube2d3	ENSMUST00000106291	ENSMUSP00000101898	TRANSLATION	protein_coding	-	CCDS38644.1	1	147	0	4.74	19.5	178.8	0	-4,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000078578	Ube2d3	ENSMUST00000199613	ENSMUSP00000143301	TRANSLATION	protein_coding	-	CCDS38644.1	3	147	0	4.74	19.5	178.8	0	-4,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000078578	Ube2d3	ENSMUST00000198685	ENSMUSP00000142612	TRANSLATION	protein_coding	stop	-	3	132	0	4.24	0	171.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078578	Ube2d3	ENSMUST00000166033	ENSMUSP00000130096	TRANSLATION	protein_coding	-	CCDS38644.1	1	147	0	4.74	19.5	178.8	0	-4,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000078578	Ube2d3	ENSMUST00000197539	ENSMUSP00000143065	TRANSLATION	protein_coding	-	CCDS38644.1	1	147	0	4.74	19.5	178.8	0	-4,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000078578	Ube2d3	ENSMUST00000197134	ENSMUSP00000143606	TRANSLATION	protein_coding	-	-	5	148	0	4.74	19.5	180.1	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000078578	Ube2d3	ENSMUST00000197859	ENSMUSP00000143608	TRANSLATION	protein_coding	-	CCDS38644.1	1	147	0	4.74	19.5	178.8	0	-4,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000078578	Ube2d3	ENSMUST00000196878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078578	Ube2d3	ENSMUST00000198748	ENSMUSP00000142763	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	1.476	0	23.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078578	Ube2d3	ENSMUST00000196591	ENSMUSP00000143758	TRANSLATION	protein_coding	stop	-	5	73	0	2.49	0	80.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078578	Ube2d3	ENSMUST00000197357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078578	Ube2d3	ENSMUST00000199582	ENSMUSP00000143013	TRANSLATION	protein_coding	stop	-	3	29	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069041	Slc25a31	ENSMUST00000091184	ENSMUSP00000088723	TRANSLATION	protein_coding	-	CCDS17326.1	1	320	44	6	2.9	236.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054215	Sprr2k	ENSMUST00000067102	ENSMUSP00000063287	TRANSLATION	protein_coding	-	CCDS38512.1	1	68	0	0	0.5	80.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052310	Slc39a1	ENSMUST00000015467	ENSMUSP00000076012	TRANSLATION	protein_coding	-	CCDS17525.1	1	324	0	0	7.5	195.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000037922	Bank1	ENSMUST00000196131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037922	Bank1	ENSMUST00000199902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037922	Bank1	ENSMUST00000198034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037922	Bank1	ENSMUST00000198206	ENSMUSP00000142996	TRANSLATION	protein_coding	-	-	5	582	0	0	0	69.4	0	-4,-7	-	-	6	MINOR
ENSMUSG00000037922	Bank1	ENSMUST00000196159	ENSMUSP00000142366	TRANSLATION	protein_coding	-	CCDS80026.1	1	650	0	0	0.5	69.4	0	-4,-7	-	-	6	MINOR
ENSMUSG00000037922	Bank1	ENSMUST00000041577	ENSMUSP00000035484	TRANSLATION	protein_coding	-	CCDS38645.1	1	783	0	0.64	1.5	69.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000027880	Slc25a54	ENSMUST00000029478	ENSMUSP00000029478	TRANSLATION	protein_coding	-	CCDS51052.1	1	473	12	7.01	1.5	283.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027880	Slc25a54	ENSMUST00000159926	ENSMUSP00000124484	TRANSLATION	nonsense_mediated_decay	-	-	1	64	5	1	0	24.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028082	Sh3d19	ENSMUST00000107664	ENSMUSP00000103291	TRANSLATION	protein_coding	-	CCDS38469.2	1	789	0	6.59	0.5	213.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028082	Sh3d19	ENSMUST00000238545	ENSMUSP00000158832	TRANSLATION	protein_coding	-	-	-	1006	0	6.59	0.5	213.4	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028082	Sh3d19	ENSMUST00000238222	ENSMUSP00000158775	TRANSLATION	protein_coding	-	CCDS38469.2	-	789	0	6.59	0.5	213.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028082	Sh3d19	ENSMUST00000183202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028082	Sh3d19	ENSMUST00000238443	ENSMUSP00000158699	TRANSLATION	protein_coding	-	-	-	1065	0	6.59	0.5	213.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028082	Sh3d19	ENSMUST00000182666	ENSMUSP00000138320	TRANSLATION	protein_coding	-	CCDS38469.2	5	789	0	6.59	0.5	213.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028082	Sh3d19	ENSMUST00000238606	ENSMUSP00000158808	TRANSLATION	protein_coding	-	-	-	730	0	6.275	0	186.7	0	-4,-5	-	-	9.768	MINOR
ENSMUSG00000028082	Sh3d19	ENSMUST00000238331	ENSMUSP00000158600	TRANSLATION	protein_coding	-	CCDS38469.2	-	789	0	6.59	0.5	213.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000005640	Insrr	ENSMUST00000166771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005640	Insrr	ENSMUST00000166866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005640	Insrr	ENSMUST00000107582	ENSMUSP00000103208	TRANSLATION	protein_coding	-	CCDS17454.1	5	1300	18	16.63	1.5	587.3	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005640	Insrr	ENSMUST00000029711	ENSMUSP00000029711	TRANSLATION	protein_coding	-	CCDS17454.1	1	1300	18	16.63	1.5	587.3	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034151	Zbbx	ENSMUST00000107776	ENSMUSP00000103405	TRANSLATION	protein_coding	-	-	5	581	8	0	0	25.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034151	Zbbx	ENSMUST00000039269	ENSMUSP00000043970	TRANSLATION	protein_coding	-	CCDS79924.1	1	711	8	0	0.5	25.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034151	Zbbx	ENSMUST00000107775	ENSMUSP00000103404	TRANSLATION	protein_coding	-	-	1	374	8	0	0	25.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034151	Zbbx	ENSMUST00000107778	ENSMUSP00000103407	TRANSLATION	protein_coding	-	CCDS17412.1	1	716	8	0	0.5	25.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000034151	Zbbx	ENSMUST00000124618	ENSMUSP00000122459	TRANSLATION	protein_coding	stop	-	5	199	8	0	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038902	Pogz	ENSMUST00000107269	ENSMUSP00000102890	TRANSLATION	protein_coding	-	-	5	1314	22	3.06	0	82.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038902	Pogz	ENSMUST00000140397	ENSMUSP00000122492	TRANSLATION	nonsense_mediated_decay	start	-	5	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038902	Pogz	ENSMUST00000132544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038902	Pogz	ENSMUST00000107266	ENSMUSP00000102887	TRANSLATION	protein_coding	-	-	5	1356	22	3.06	3.9	82.3	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000038902	Pogz	ENSMUST00000107265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038902	Pogz	ENSMUST00000126235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038902	Pogz	ENSMUST00000125638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038902	Pogz	ENSMUST00000107270	ENSMUSP00000102891	TRANSLATION	protein_coding	-	CCDS17596.1	1	1409	22	3.06	3.9	82.3	0	-4,-5	-	-	19	PRINCIPAL:3
ENSMUSG00000038902	Pogz	ENSMUST00000142253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038902	Pogz	ENSMUST00000042402	ENSMUSP00000037523	TRANSLATION	protein_coding	-	CCDS50985.1	1	1400	22	3.06	2.7	82.3	0	-4,-5	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000036885	Arhgef26	ENSMUST00000161493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036885	Arhgef26	ENSMUST00000159746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036885	Arhgef26	ENSMUST00000079300	ENSMUSP00000078281	TRANSLATION	protein_coding	-	CCDS38443.1	1	869	0	6.75	1.5	194.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036885	Arhgef26	ENSMUST00000163008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036885	Arhgef26	ENSMUST00000161057	ENSMUSP00000124392	TRANSLATION	protein_coding	start/stop	-	5	257	0	3.31	0	89.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036885	Arhgef26	ENSMUST00000192138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000105103	Gm43191	ENSMUST00000140672	ENSMUSP00000114952	TRANSLATION	protein_coding,RT	start/stop	-	3	235	0	0	0	171.9	0	-2,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000042244	Pglyrp3	ENSMUST00000047660	ENSMUSP00000035737	TRANSLATION	protein_coding	-	CCDS17545.1	1	347	6	4.18	0.5	101.9	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000039335	Spata16	ENSMUST00000108305	ENSMUSP00000103941	TRANSLATION	protein_coding	-	CCDS38403.1	1	534	0	0	0.5	1062.4	0	-4,-6	-	-	1.83	MINOR
ENSMUSG00000039335	Spata16	ENSMUST00000047005	ENSMUSP00000043378	TRANSLATION	protein_coding	-	CCDS17269.1	1	571	0	0	1.5	1131.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027966	Col11a1	ENSMUST00000123619	ENSMUSP00000121027	TRANSLATION	protein_coding	stop	-	5	567	0	1.24	0	64.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000027966	Col11a1	ENSMUST00000196654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027966	Col11a1	ENSMUST00000196345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027966	Col11a1	ENSMUST00000211802	ENSMUSP00000148798	TRANSLATION	nonsense_mediated_decay	start	-	3	128	0	2.8584	0	38.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027966	Col11a1	ENSMUST00000184978	ENSMUSP00000138879	TRANSLATION	nonsense_mediated_decay	start	-	1	536	5	12.2	0	226.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027966	Col11a1	ENSMUST00000138680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027966	Col11a1	ENSMUST00000092155	ENSMUSP00000089793	TRANSLATION	protein_coding	-	CCDS17778.1	1	1804	5	26.82	5.1	579.8	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000034139	Serpini2	ENSMUST00000039047	ENSMUSP00000046943	TRANSLATION	protein_coding	-	CCDS17413.1	1	405	0	6.54	2.7	378.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038550	Ciart	ENSMUST00000161866	ENSMUSP00000135072	TRANSLATION	protein_coding	stop	-	2	185	0	0	0	361.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038550	Ciart	ENSMUST00000161994	ENSMUSP00000124125	TRANSLATION	protein_coding	stop	-	5	154	0	0	0	147.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038550	Ciart	ENSMUST00000159863	ENSMUSP00000135522	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	132.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038550	Ciart	ENSMUST00000159739	ENSMUSP00000124943	TRANSLATION	protein_coding	-	CCDS50997.1	1	375	0	0	0.5	552.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038550	Ciart	ENSMUST00000161867	ENSMUSP00000124831	TRANSLATION	protein_coding	start	-	3	115	0	0	0	255.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038550	Ciart	ENSMUST00000036418	ENSMUSP00000049308	TRANSLATION	protein_coding	-	CCDS50997.1	1	375	0	0	0.5	552.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028089	Chd1l	ENSMUST00000195962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028089	Chd1l	ENSMUST00000029730	ENSMUSP00000029730	TRANSLATION	protein_coding	-	CCDS38561.1	1	900	7	14.3	0.5	254.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028089	Chd1l	ENSMUST00000197304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027876	Reg4	ENSMUST00000029469	ENSMUSP00000029469	TRANSLATION	protein_coding	-	CCDS17661.1	1	157	3	3.75	2.7	73.9	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000051788	4930564D02Rik	ENSMUST00000070584	ENSMUSP00000069820	TRANSLATION	protein_coding	-	CCDS57251.1	1	103	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000027698	Nceh1	ENSMUST00000138947	ENSMUSP00000115209	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0.2	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000027698	Nceh1	ENSMUST00000091284	ENSMUSP00000088829	TRANSLATION	protein_coding	-	-	1	199	0	1.43	0	0	0	1,-2	-	-	3.558	MINOR
ENSMUSG00000027698	Nceh1	ENSMUST00000046515	ENSMUSP00000045864	TRANSLATION	protein_coding	-	CCDS17271.1	1	408	3	2.41	2.7	19.5	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027698	Nceh1	ENSMUST00000140872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027698	Nceh1	ENSMUST00000129412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028175	Depdc1a	ENSMUST00000029825	ENSMUSP00000029825	TRANSLATION	protein_coding	-	CCDS17936.1	1	804	0	3.15	0.5	59.1	0	-4,-7	-	-	9.708	MINOR
ENSMUSG00000028175	Depdc1a	ENSMUST00000120272	ENSMUSP00000113216	TRANSLATION	protein_coding	-	CCDS51105.1	1	806	0	3.15	1.5	59.1	0	-4,-7	-	-	9.896	MINOR
ENSMUSG00000028175	Depdc1a	ENSMUST00000106041	ENSMUSP00000101656	TRANSLATION	protein_coding	-	CCDS51106.1	1	529	0	3.15	6.3	95.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000050064	Zfp697	ENSMUST00000196194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050064	Zfp697	ENSMUST00000056096	ENSMUSP00000056979	TRANSLATION	protein_coding	-	CCDS38564.1	1	569	44	0.6	0.5	217.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050064	Zfp697	ENSMUST00000196741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050064	Zfp697	ENSMUST00000178372	ENSMUSP00000136417	TRANSLATION	protein_coding	-	CCDS38564.1	5	569	44	0.6	0.5	217.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068888	Lce1i	ENSMUST00000090866	ENSMUSP00000088379	TRANSLATION	protein_coding	-	CCDS38516.1	1	149	0	0	0.5	29.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095388	Gm10681	ENSMUST00000186215	ENSMUSP00000140584	TRANSLATION	protein_coding	-	CCDS57247.1	2	373	26	1.6	1.5	351.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000095388	Gm10681	ENSMUST00000058728	ENSMUSP00000055886	TRANSLATION	protein_coding	-	CCDS57247.1	1	373	26	1.6	1.5	351.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000095388	Gm10681	ENSMUST00000178221	ENSMUSP00000136749	TRANSLATION	protein_coding	-	CCDS57247.1	5	373	26	1.6	1.5	351.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000027722	Spata5	ENSMUST00000132958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027722	Spata5	ENSMUST00000138225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027722	Spata5	ENSMUST00000124347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027722	Spata5	ENSMUST00000130674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027722	Spata5	ENSMUST00000029277	ENSMUSP00000029277	TRANSLATION	protein_coding	-	CCDS17321.1	1	892	29	9.11	2.7	301.8	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000027722	Spata5	ENSMUST00000147687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027722	Spata5	ENSMUST00000108112	ENSMUSP00000103747	TRANSLATION	protein_coding	-	CCDS50895.1	1	893	29	9.11	2.7	301.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000027722	Spata5	ENSMUST00000200093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027722	Spata5	ENSMUST00000142199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027722	Spata5	ENSMUST00000198968	ENSMUSP00000143349	TRANSLATION	protein_coding	-	CCDS79900.1	1	842	29	8.84	1.5	301.8	0	-4,-2	-	-	17.46	ALTERNATIVE:2
ENSMUSG00000042250	Pglyrp4	ENSMUST00000156268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042250	Pglyrp4	ENSMUST00000169698	ENSMUSP00000128113	TRANSLATION	protein_coding	-	CCDS50972.1	1	375	10	4.08	1.5	88.9	0	4,-1	-	-	17.238	ALTERNATIVE:2
ENSMUSG00000042250	Pglyrp4	ENSMUST00000047745	ENSMUSP00000040755	TRANSLATION	protein_coding	-	CCDS17544.1	1	374	11	4.08	2.7	90.3	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000027985	Lef1	ENSMUST00000029611	ENSMUSP00000029611	TRANSLATION	protein_coding	-	CCDS17842.1	1	397	0	3.5	10.8	362.2	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000027985	Lef1	ENSMUST00000098611	ENSMUSP00000096211	TRANSLATION	protein_coding	-	CCDS71320.1	1	331	0	2.5	5.1	252.7	0	-4,-6	-	-	5.256	MINOR
ENSMUSG00000027985	Lef1	ENSMUST00000198624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027985	Lef1	ENSMUST00000200166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027985	Lef1	ENSMUST00000132737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027985	Lef1	ENSMUST00000066849	ENSMUSP00000067808	TRANSLATION	protein_coding	-	-	5	369	0	3.5	10.8	362.2	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000027985	Lef1	ENSMUST00000106341	ENSMUSP00000101948	TRANSLATION	protein_coding	-	CCDS71319.1	1	384	0	3.5	10.8	362.2	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000027985	Lef1	ENSMUST00000136147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000140060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000136413	ENSMUSP00000116688	TRANSLATION	protein_coding	start/stop	-	5	126	0	3.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015522	Arnt	ENSMUST00000107161	ENSMUSP00000102779	TRANSLATION	protein_coding	-	-	1	760	0	8.88	0	180	0	-4,-5	-	-	10.998	MINOR
ENSMUSG00000015522	Arnt	ENSMUST00000149051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000015666	ENSMUSP00000015666	TRANSLATION	protein_coding	-	-	5	771	0	8.55	0	160.6	0	-4,-5	-	-	9.174	MINOR
ENSMUSG00000015522	Arnt	ENSMUST00000156653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000107160	ENSMUSP00000102778	TRANSLATION	protein_coding	-	-	1	76	0	0.1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000015522	Arnt	ENSMUST00000147765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000102749	ENSMUSP00000099810	TRANSLATION	protein_coding	-	CCDS17614.1	1	791	0	9.38	4.1	180	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000015522	Arnt	ENSMUST00000147094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015522	Arnt	ENSMUST00000090804	ENSMUSP00000088313	TRANSLATION	protein_coding	-	CCDS38546.1	1	776	0	8.88	2.9	180	0	-4,-5	-	-	11.611	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000117278	ENSMUSP00000113706	TRANSLATION	protein_coding	-	-	5	650	0	0	1.7	80.5	8	-4,-1	-	-	4.17	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000041913	ENSMUSP00000039261	TRANSLATION	protein_coding	-	CCDS17492.1	1	669	0	0	6.3	115.4	9	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000032657	Fam189b	ENSMUST00000125501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032657	Fam189b	ENSMUST00000136209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032657	Fam189b	ENSMUST00000127982	ENSMUSP00000114855	TRANSLATION	nonsense_mediated_decay	-	-	1	140	0	0	0	32.9	3	-4,0	-	-	-1	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000147696	ENSMUSP00000117185	TRANSLATION	nonsense_mediated_decay	-	-	1	391	0	0	0	115.4	9	-4,-1	-	-	-1	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000119707	ENSMUSP00000113579	TRANSLATION	protein_coding	-	-	5	591	0	0	0	55.2	7	-4,-1	-	-	2.388	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000155033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032657	Fam189b	ENSMUST00000140473	ENSMUSP00000116419	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032657	Fam189b	ENSMUST00000126115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028053	Ash1l	ENSMUST00000090933	ENSMUSP00000088451	TRANSLATION	protein_coding	-	CCDS17487.1	5	2958	29	11	1.5	207.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028053	Ash1l	ENSMUST00000189824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028053	Ash1l	ENSMUST00000198846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028053	Ash1l	ENSMUST00000186583	ENSMUSP00000140251	TRANSLATION	protein_coding	-	CCDS17487.1	5	2958	29	11	1.5	207.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027937	Jtb	ENSMUST00000119304	ENSMUSP00000113763	TRANSLATION	protein_coding	-	-	3	95	0	1.5	0	59	0	3,-1	-	-	7.176	MINOR
ENSMUSG00000027937	Jtb	ENSMUST00000029546	ENSMUSP00000029546	TRANSLATION	protein_coding	-	CCDS17523.1	1	146	0	1.7	7.5	127.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027937	Jtb	ENSMUST00000157045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027937	Jtb	ENSMUST00000123839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025764	Jade1	ENSMUST00000192451	ENSMUSP00000142142	TRANSLATION	protein_coding	start/stop	-	3	164	12	0.6	0	37.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025764	Jade1	ENSMUST00000026865	ENSMUSP00000026865	TRANSLATION	protein_coding	-	CCDS17331.1	1	834	17	2.8	1.5	190.1	0	-4,-5	-	-	17.928	PRINCIPAL:2
ENSMUSG00000025764	Jade1	ENSMUST00000194181	ENSMUSP00000141670	TRANSLATION	protein_coding	stop	-	5	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025764	Jade1	ENSMUST00000191952	ENSMUSP00000141499	TRANSLATION	protein_coding	-	-	5	510	17	2.8	2.4	191.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025764	Jade1	ENSMUST00000194348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025764	Jade1	ENSMUST00000168086	ENSMUSP00000131441	TRANSLATION	protein_coding	-	CCDS17331.1	1	834	17	2.8	1.5	190.1	0	-4,-5	-	-	17.928	PRINCIPAL:2
ENSMUSG00000025764	Jade1	ENSMUST00000163764	ENSMUSP00000128152	TRANSLATION	protein_coding	-	CCDS17331.1	1	834	17	2.8	1.5	190.1	0	-4,-5	-	-	17.928	PRINCIPAL:2
ENSMUSG00000025764	Jade1	ENSMUST00000195846	ENSMUSP00000141711	TRANSLATION	protein_coding	stop	-	5	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025764	Jade1	ENSMUST00000195322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025764	Jade1	ENSMUST00000192300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025764	Jade1	ENSMUST00000170711	ENSMUSP00000127113	TRANSLATION	protein_coding	-	CCDS17331.1	5	834	17	2.8	1.5	190.1	0	-4,-5	-	-	17.928	PRINCIPAL:2
ENSMUSG00000025764	Jade1	ENSMUST00000195200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025764	Jade1	ENSMUST00000193080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025764	Jade1	ENSMUST00000191921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046213	Cym	ENSMUST00000029504	ENSMUSP00000029504	TRANSLATION	protein_coding	-	CCDS51041.1	1	379	5	7.6	3.9	408.6	0	4,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000103243	Lce1d	ENSMUST00000029524	ENSMUSP00000029524	TRANSLATION	protein_coding	-	CCDS17566.1	1	133	0	0	0.5	28.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040016	Ptger3	ENSMUST00000041175	ENSMUSP00000043302	TRANSLATION	protein_coding	-	CCDS17932.1	1	362	0	0	1.5	81.8	6	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000040016	Ptger3	ENSMUST00000173533	ENSMUSP00000134137	TRANSLATION	protein_coding	-	-	1	366	0	0	1.5	81.8	6	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000040016	Ptger3	ENSMUST00000196682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068889	Lce1e	ENSMUST00000090867	ENSMUSP00000088380	TRANSLATION	protein_coding	-	CCDS17567.1	1	143	0	0	0.5	29	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028185	Dnase2b	ENSMUST00000029836	ENSMUSP00000029836	TRANSLATION	protein_coding	-	CCDS17904.1	1	354	0	2.81	0.5	371.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028185	Dnase2b	ENSMUST00000200633	ENSMUSP00000142872	TRANSLATION	protein_coding	-	CCDS17904.1	1	354	0	2.81	0.5	371.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000055436	Srsf11	ENSMUST00000196034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000152274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000072875	ENSMUSP00000072651	TRANSLATION	protein_coding	-	CCDS51102.1	1	476	0	0	1.5	32	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000055436	Srsf11	ENSMUST00000156303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000133090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000137444	ENSMUSP00000122686	TRANSLATION	protein_coding	stop	-	5	192	0	0	0	32	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000145267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000126377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000069025	ENSMUSP00000063916	TRANSLATION	protein_coding	start	-	5	500	0	0	0	32	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000199742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000127778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000197292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000089922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055436	Srsf11	ENSMUST00000198705	ENSMUSP00000142759	TRANSLATION	protein_coding	start/stop	-	5	175	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000147304	ENSMUSP00000115487	TRANSLATION	nonsense_mediated_decay	start	-	3	101	0	0	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000140491	ENSMUSP00000118767	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000121326	ENSMUSP00000113685	TRANSLATION	protein_coding	-	CCDS51103.1	5	511	0	0	1.5	32	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000055436	Srsf11	ENSMUST00000126716	ENSMUSP00000114370	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	0	0	32	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055436	Srsf11	ENSMUST00000199520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102422	Iqschfp	ENSMUST00000182006	ENSMUSP00000138212	TRANSLATION	protein_coding,RT	-	CCDS79923.1	2	559	0	0	3.9	574.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034109	Golim4	ENSMUST00000150904	ENSMUSP00000119501	TRANSLATION	protein_coding	start/stop	-	3	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034109	Golim4	ENSMUST00000167078	ENSMUSP00000132910	TRANSLATION	protein_coding	-	CCDS17416.1	1	655	0	0	1.5	0	1	-2,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000034109	Golim4	ENSMUST00000134219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034109	Golim4	ENSMUST00000038563	ENSMUSP00000048997	TRANSLATION	protein_coding	-	CCDS17416.1	1	655	0	0	1.5	0	1	-2,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000034109	Golim4	ENSMUST00000134444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034109	Golim4	ENSMUST00000125405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034109	Golim4	ENSMUST00000192433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034109	Golim4	ENSMUST00000131987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034109	Golim4	ENSMUST00000117242	ENSMUSP00000114006	TRANSLATION	protein_coding	-	CCDS71251.1	1	683	0	0	1.5	0	1	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000028199	Cryz	ENSMUST00000029850	ENSMUSP00000029850	TRANSLATION	protein_coding	-	CCDS17927.1	1	331	23	9.62	7.5	99.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000028199	Cryz	ENSMUST00000155385	ENSMUSP00000122619	TRANSLATION	protein_coding	stop	-	5	137	2	3.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000195292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028199	Cryz	ENSMUST00000194876	ENSMUSP00000142101	TRANSLATION	protein_coding	stop	-	1	301	21	8.87	0	99.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000184537	ENSMUSP00000139387	TRANSLATION	nonsense_mediated_decay	-	-	1	223	12	6.6	0	42.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000135723	ENSMUSP00000143311	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000155232	ENSMUSP00000118449	TRANSLATION	protein_coding	stop	-	3	173	8	5.32	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000140644	ENSMUSP00000115146	TRANSLATION	protein_coding	stop	-	3	97	1	2.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000195103	ENSMUSP00000141246	TRANSLATION	protein_coding	start/stop	-	5	171	14	4.8	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000144764	ENSMUSP00000121269	TRANSLATION	protein_coding	stop	-	3	152	3	4.49	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028199	Cryz	ENSMUST00000192462	ENSMUSP00000142105	TRANSLATION	protein_coding	-	CCDS17927.1	1	331	23	9.62	7.5	99.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000019338	Zfp687	ENSMUST00000126222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019338	Zfp687	ENSMUST00000019482	ENSMUSP00000019482	TRANSLATION	protein_coding	-	CCDS17600.1	1	1237	29	1.36	1.5	87.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019338	Zfp687	ENSMUST00000128438	ENSMUSP00000119354	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019338	Zfp687	ENSMUST00000147022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019338	Zfp687	ENSMUST00000132195	ENSMUSP00000117308	TRANSLATION	protein_coding	stop	-	2	206	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019338	Zfp687	ENSMUST00000137799	ENSMUSP00000123335	TRANSLATION	nonsense_mediated_decay	-	-	1	786	15	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019338	Zfp687	ENSMUST00000149747	ENSMUSP00000116053	TRANSLATION	protein_coding	stop	-	2	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019338	Zfp687	ENSMUST00000146169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027702	Lrrc34	ENSMUST00000029252	ENSMUSP00000029252	TRANSLATION	protein_coding	-	CCDS38405.1	1	415	0	5.55	1.5	112	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028189	Ctbs	ENSMUST00000197166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028189	Ctbs	ENSMUST00000061937	ENSMUSP00000059167	TRANSLATION	protein_coding	-	CCDS80048.1	1	366	2	3.16	0.5	122.7	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028189	Ctbs	ENSMUST00000029840	ENSMUSP00000029840	TRANSLATION	protein_coding	-	CCDS17902.1	1	312	2	2.68	0.5	103.5	0	3,-2	-	-	11.888	MINOR
ENSMUSG00000028189	Ctbs	ENSMUST00000196609	ENSMUSP00000142380	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000055891	Ubl4b	ENSMUST00000052853	ENSMUSP00000100577	TRANSLATION	protein_coding	-	CCDS38592.1	-	188	0	0.6	0.5	56.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036513	Commd2	ENSMUST00000163087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036513	Commd2	ENSMUST00000041954	ENSMUSP00000042228	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036513	Commd2	ENSMUST00000160959	ENSMUSP00000124819	TRANSLATION	protein_coding	-	CCDS17362.1	1	199	0	0	15	66.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000027801	Tm4sf4	ENSMUST00000029377	ENSMUSP00000029377	TRANSLATION	protein_coding	-	CCDS17361.1	1	202	0	0	0.5	255.7	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028121	Bcar3	ENSMUST00000197956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028121	Bcar3	ENSMUST00000199344	ENSMUSP00000143711	TRANSLATION	protein_coding	stop	-	5	260	0	2.65	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028121	Bcar3	ENSMUST00000199358	ENSMUSP00000142340	TRANSLATION	protein_coding	stop	-	2	144	0	1.08	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028121	Bcar3	ENSMUST00000198659	ENSMUSP00000143112	TRANSLATION	protein_coding	stop	-	2	186	0	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028121	Bcar3	ENSMUST00000196134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028121	Bcar3	ENSMUST00000197959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028121	Bcar3	ENSMUST00000197073	ENSMUSP00000142469	TRANSLATION	protein_coding	stop	-	2	178	0	1.1988	0	55.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028121	Bcar3	ENSMUST00000200544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028121	Bcar3	ENSMUST00000029766	ENSMUSP00000029766	TRANSLATION	protein_coding	-	CCDS17810.1	1	820	0	8.2488	0.5	95.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028121	Bcar3	ENSMUST00000197590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049013	Prss48	ENSMUST00000061343	ENSMUSP00000051199	TRANSLATION	protein_coding	-	CCDS17444.1	1	312	6	3.24	0.5	221.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000002428	Hltf	ENSMUST00000128127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002428	Hltf	ENSMUST00000155635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002428	Hltf	ENSMUST00000154233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002428	Hltf	ENSMUST00000143005	ENSMUSP00000116570	TRANSLATION	nonsense_mediated_decay	-	-	5	628	3	4.9	0	236.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002428	Hltf	ENSMUST00000145853	ENSMUSP00000118775	TRANSLATION	nonsense_mediated_decay	-	-	1	566	3	4.5	0	233.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002428	Hltf	ENSMUST00000002502	ENSMUSP00000002502	TRANSLATION	protein_coding	-	CCDS17261.1	1	1003	3	10.43	1.5	419.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078590	Gm10959	ENSMUST00000106431	ENSMUSP00000102039	TRANSLATION	protein_coding	start/stop	-	5	24	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027533	Fabp5	ENSMUST00000029046	ENSMUSP00000029046	TRANSLATION	protein_coding	-	CCDS38388.1	1	135	19	3.25	6.3	66.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027533	Fabp5	ENSMUST00000123744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027927	Lelp1	ENSMUST00000029535	ENSMUSP00000029535	TRANSLATION	protein_coding	-	CCDS50974.1	1	120	0	0	0.5	104.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000085007	Gm11549	ENSMUST00000199064	-	NO_TRANSLATION	TEC
ENSMUSG00000085007	Gm11549	ENSMUST00000124606	ENSMUSP00000153318	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000085007	Gm11549	ENSMUST00000238836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068547	Clca4a	ENSMUST00000029923	ENSMUSP00000029923	TRANSLATION	protein_coding	-	-	1	924	6	0	1.5	530.5	2	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000068547	Clca4a	ENSMUST00000238960	ENSMUSP00000159165	TRANSLATION	protein_coding	-	CCDS38661.1	-	925	6	0	1.5	530.5	2	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000028013	Ppa2	ENSMUST00000150386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028013	Ppa2	ENSMUST00000153387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028013	Ppa2	ENSMUST00000122334	ENSMUSP00000113369	TRANSLATION	protein_coding	-	CCDS80024.1	1	329	11	6.578	1.5	197.7	0	-1,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000028013	Ppa2	ENSMUST00000029644	ENSMUSP00000029644	TRANSLATION	protein_coding	-	CCDS17850.1	1	330	11	6.4856	1.5	197.7	0	-1,2	-	-	17.814	PRINCIPAL:3
ENSMUSG00000028013	Ppa2	ENSMUST00000106315	ENSMUSP00000101922	TRANSLATION	protein_coding	start	-	3	152	5	3.15	0	92.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028013	Ppa2	ENSMUST00000198519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028013	Ppa2	ENSMUST00000196807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028013	Ppa2	ENSMUST00000125858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074403	H3c13	ENSMUST00000098843	ENSMUSP00000096442	TRANSLATION	protein_coding	-	CCDS17638.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028184	Adgrl2	ENSMUST00000200543	ENSMUSP00000142336	TRANSLATION	protein_coding	-	-	5	1403	6	12.837	5.3	1217	14	1,0	-	-	12.998	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000197348	ENSMUSP00000142618	TRANSLATION	protein_coding	start	-	3	196	0	1.942	0	204.8	10	-2,-5	-	-	-1	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000199059	ENSMUSP00000143150	TRANSLATION	protein_coding	-	-	5	1467	6	13.337	1.5	1371.3	14	1,0	-	-	15.28	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000198563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028184	Adgrl2	ENSMUST00000098518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028184	Adgrl2	ENSMUST00000197567	ENSMUSP00000143626	TRANSLATION	protein_coding	-	CCDS80059.1	2	1487	6	13.337	3.5	1420.5	14	1,0	-	-	19.162	PRINCIPAL:2
ENSMUSG00000028184	Adgrl2	ENSMUST00000196526	ENSMUSP00000143788	TRANSLATION	protein_coding	-	-	5	1177	6	12.837	3.6	982.3	14	1,0	-	-	12.208	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000197925	ENSMUSP00000143760	TRANSLATION	protein_coding	start/stop	-	3	264	0	2.257	0	299.8	11	-2,-4	-	-	-1	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000200216	ENSMUSP00000142505	TRANSLATION	protein_coding	start	-	3	79	0	0	0	108.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000200456	ENSMUSP00000142371	TRANSLATION	protein_coding	start	-	3	138	0	0.364	0	169.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000106128	ENSMUSP00000101734	TRANSLATION	protein_coding	-	-	5	1487	6	13.337	1.5	1420.5	14	1,0	-	-	18.232	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000197521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028184	Adgrl2	ENSMUST00000198139	ENSMUSP00000143511	TRANSLATION	protein_coding	start	-	1	471	0	1.144	0	589.4	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000199750	ENSMUSP00000143320	TRANSLATION	protein_coding	-	-	5	1341	6	12.637	1.3	1217	14	1,0	-	-	10.742	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000198779	ENSMUSP00000142347	TRANSLATION	protein_coding	-	-	5	1452	6	13.337	1.5	1377.3	14	1,0	-	-	15.64	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000195988	ENSMUSP00000143444	TRANSLATION	protein_coding	-	-	5	1435	6	13.337	2.7	1208.4	14	1,0	-	-	12.79	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000200154	ENSMUSP00000142865	TRANSLATION	protein_coding	-	-	5	1123	6	12.837	1.2	893.9	14	1,0	-	-	11.092	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000199238	ENSMUSP00000142405	TRANSLATION	protein_coding	-	-	5	1478	6	13.337	3.9	1417.6	14	1,0	-	-	19.174	ALTERNATIVE:2
ENSMUSG00000028184	Adgrl2	ENSMUST00000168352	ENSMUSP00000132116	TRANSLATION	protein_coding	-	-	1	239	0	0	0	307	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028184	Adgrl2	ENSMUST00000200023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019710	Mrpl24	ENSMUST00000152287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019710	Mrpl24	ENSMUST00000137775	ENSMUSP00000142071	TRANSLATION	protein_coding	stop	-	2	62	0	1	0	0	0	0,4	-	-	-1	MINOR
ENSMUSG00000019710	Mrpl24	ENSMUST00000119968	ENSMUSP00000114111	TRANSLATION	protein_coding	-	CCDS38477.1	1	216	0	5	10.8	79.2	0	0,4	-	-	15	PRINCIPAL:1
ENSMUSG00000019710	Mrpl24	ENSMUST00000121048	ENSMUSP00000113959	TRANSLATION	protein_coding	-	CCDS38477.1	1	216	0	5	10.8	79.2	0	0,4	-	-	15	PRINCIPAL:1
ENSMUSG00000019710	Mrpl24	ENSMUST00000121920	ENSMUSP00000112885	TRANSLATION	protein_coding	-	CCDS38477.1	1	216	0	5	10.8	79.2	0	0,4	-	-	15	PRINCIPAL:1
ENSMUSG00000019710	Mrpl24	ENSMUST00000019854	ENSMUSP00000019854	TRANSLATION	protein_coding	-	CCDS38477.1	1	216	0	5	10.8	79.2	0	0,4	-	-	15	PRINCIPAL:1
ENSMUSG00000028172	Tacr3	ENSMUST00000029822	ENSMUSP00000029822	TRANSLATION	protein_coding	-	CCDS17852.1	1	452	0	4.4	1.5	193.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034640	Tiparp	ENSMUST00000130705	ENSMUSP00000119951	TRANSLATION	protein_coding	stop	-	3	205	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034640	Tiparp	ENSMUST00000154094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034640	Tiparp	ENSMUST00000047906	ENSMUSP00000048051	TRANSLATION	protein_coding	-	CCDS17388.1	1	657	3	1.4	6.3	116.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000056498	Tmem154	ENSMUST00000129417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056498	Tmem154	ENSMUST00000107682	ENSMUSP00000103310	TRANSLATION	protein_coding	-	CCDS38467.1	1	181	0	0	1.5	163	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000056498	Tmem154	ENSMUST00000134890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056498	Tmem154	ENSMUST00000128344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037625	Cldn11	ENSMUST00000046174	ENSMUSP00000042181	TRANSLATION	protein_coding	-	CCDS17290.1	1	207	0	1.78	15	72.3	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038403	Hjv	ENSMUST00000049208	ENSMUSP00000046659	TRANSLATION	protein_coding	-	CCDS51003.1	1	420	0	1.7	0.5	391.3	0	0,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058174	Gm5148	ENSMUST00000134904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058174	Gm5148	ENSMUST00000099128	ENSMUSP00000096731	TRANSLATION	protein_coding	-	CCDS50896.1	1	154	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000058174	Gm5148	ENSMUST00000079755	ENSMUSP00000078691	TRANSLATION	protein_coding	-	CCDS50896.1	1	154	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000058174	Gm5148	ENSMUST00000108105	ENSMUSP00000103740	TRANSLATION	protein_coding	-	CCDS50896.1	1	154	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001420	Tmem79	ENSMUST00000193872	ENSMUSP00000141830	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001420	Tmem79	ENSMUST00000107553	ENSMUSP00000103177	TRANSLATION	protein_coding	-	CCDS17470.1	1	391	0	0	5.1	0	4	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000001420	Tmem79	ENSMUST00000001456	ENSMUSP00000001456	TRANSLATION	protein_coding	-	CCDS17470.1	1	391	0	0	5.1	0	4	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000001420	Tmem79	ENSMUST00000107552	ENSMUSP00000103176	TRANSLATION	protein_coding	-	CCDS17470.1	5	391	0	0	5.1	0	4	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000045662	Henmt1	ENSMUST00000098680	ENSMUSP00000096277	TRANSLATION	protein_coding	-	-	1	262	18	6.259	0	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045662	Henmt1	ENSMUST00000106586	ENSMUSP00000102196	TRANSLATION	protein_coding	-	CCDS38602.1	1	395	18	6.028	0.5	0	0	-4,-5	-	-	11.538	PRINCIPAL:2
ENSMUSG00000045662	Henmt1	ENSMUST00000196533	ENSMUSP00000143574	TRANSLATION	protein_coding	-	-	1	352	18	5.028	0.5	0	0	-4,-6	-	-	9.54	MINOR
ENSMUSG00000045662	Henmt1	ENSMUST00000059946	ENSMUSP00000054829	TRANSLATION	protein_coding	-	CCDS38602.1	1	395	18	6.028	0.5	0	0	-4,-5	-	-	11.538	PRINCIPAL:2
ENSMUSG00000045662	Henmt1	ENSMUST00000197427	ENSMUSP00000143304	TRANSLATION	protein_coding	stop	-	5	10	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045662	Henmt1	ENSMUST00000196400	ENSMUSP00000143561	TRANSLATION	nonsense_mediated_decay	-	-	1	98	17	2.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027667	Zfp639	ENSMUST00000029203	ENSMUSP00000029203	TRANSLATION	protein_coding	-	CCDS17295.1	1	485	28	1.6	7.5	0	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027667	Zfp639	ENSMUST00000193119	ENSMUSP00000142244	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027667	Zfp639	ENSMUST00000192985	ENSMUSP00000141559	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027667	Zfp639	ENSMUST00000194126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027667	Zfp639	ENSMUST00000193789	ENSMUSP00000142029	TRANSLATION	protein_coding	start	-	5	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027667	Zfp639	ENSMUST00000194821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027667	Zfp639	ENSMUST00000193287	ENSMUSP00000141341	TRANSLATION	protein_coding	-	CCDS17295.1	1	485	28	1.6	7.5	0	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000027667	Zfp639	ENSMUST00000193290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027667	Zfp639	ENSMUST00000191783	ENSMUSP00000141446	TRANSLATION	protein_coding	-	CCDS17295.1	1	485	28	1.6	7.5	0	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000036825	Ssx2ip	ENSMUST00000141103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036825	Ssx2ip	ENSMUST00000149262	ENSMUSP00000122322	TRANSLATION	protein_coding	stop	-	2	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036825	Ssx2ip	ENSMUST00000129978	ENSMUSP00000117501	TRANSLATION	protein_coding	stop	-	3	134	0	0	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036825	Ssx2ip	ENSMUST00000106153	ENSMUSP00000101759	TRANSLATION	protein_coding	-	CCDS38665.1	1	615	0	0	3.9	147.4	0	-4,-5	-	-	7.414	PRINCIPAL:3
ENSMUSG00000036825	Ssx2ip	ENSMUST00000106151	ENSMUSP00000101757	TRANSLATION	protein_coding	-	CCDS57260.1	1	614	0	0	5.1	147.4	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000036825	Ssx2ip	ENSMUST00000039021	ENSMUSP00000045663	TRANSLATION	protein_coding	-	CCDS57260.1	1	614	0	0	5.1	147.4	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000036825	Ssx2ip	ENSMUST00000106149	ENSMUSP00000101755	TRANSLATION	protein_coding	-	CCDS57260.1	1	614	0	0	5.1	147.4	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000015702	Anxa9	ENSMUST00000164406	ENSMUSP00000127424	TRANSLATION	protein_coding	-	CCDS50989.1	1	345	3	8.949	8.8	206.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015702	Anxa9	ENSMUST00000107183	ENSMUSP00000102801	TRANSLATION	protein_coding	-	CCDS50989.1	1	345	3	8.949	8.8	206.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015702	Anxa9	ENSMUST00000123365	ENSMUSP00000121913	TRANSLATION	protein_coding	stop	-	3	33	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015702	Anxa9	ENSMUST00000015846	ENSMUSP00000015846	TRANSLATION	protein_coding	-	CCDS50989.1	1	345	3	8.949	8.8	206.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000051860	Samd7	ENSMUST00000172593	ENSMUSP00000133333	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051860	Samd7	ENSMUST00000174395	ENSMUSP00000133687	TRANSLATION	nonsense_mediated_decay	-	-	2	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051860	Samd7	ENSMUST00000192872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051860	Samd7	ENSMUST00000108262	ENSMUSP00000103897	TRANSLATION	protein_coding	-	CCDS17285.2	5	445	0	2.1	1.5	50.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039068	Zzz3	ENSMUST00000106103	ENSMUSP00000101709	TRANSLATION	protein_coding	-	CCDS84698.1	1	409	8	5.2	4.1	71.5	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000039068	Zzz3	ENSMUST00000135044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039068	Zzz3	ENSMUST00000200570	ENSMUSP00000143693	TRANSLATION	protein_coding	-	-	5	413	8	5.2	0.5	71.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039068	Zzz3	ENSMUST00000197987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039068	Zzz3	ENSMUST00000106101	ENSMUSP00000101707	TRANSLATION	protein_coding	-	CCDS38674.1	5	910	8	5.2	1.5	71.5	0	-4,-1	-	-	18.161	PRINCIPAL:3
ENSMUSG00000039068	Zzz3	ENSMUST00000150802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039068	Zzz3	ENSMUST00000106100	ENSMUSP00000101706	TRANSLATION	protein_coding	-	CCDS38674.1	1	910	8	5.2	1.5	71.5	0	-4,-1	-	-	18.161	PRINCIPAL:3
ENSMUSG00000039068	Zzz3	ENSMUST00000138115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039068	Zzz3	ENSMUST00000089982	ENSMUSP00000087428	TRANSLATION	protein_coding	-	CCDS71338.1	1	909	8	5.2	1.5	71.5	0	-4,-1	-	-	18.161	ALTERNATIVE:2
ENSMUSG00000039068	Zzz3	ENSMUST00000198468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094962	Gm21954	ENSMUST00000179544	ENSMUSP00000136052	TRANSLATION	protein_coding	start/stop	-	5	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000103476	Strit1	ENSMUST00000192926	ENSMUSP00000147363	TRANSLATION	protein_coding	-	-	5	34	0	0	2.4	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036580	Spg20	ENSMUST00000146109	ENSMUSP00000121683	TRANSLATION	protein_coding	stop	-	3	116	0	1.75	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036580	Spg20	ENSMUST00000118118	ENSMUSP00000113621	TRANSLATION	protein_coding	-	CCDS38432.1	1	671	0	1.75	0.5	209.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036580	Spg20	ENSMUST00000199416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036580	Spg20	ENSMUST00000200658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036580	Spg20	ENSMUST00000107971	ENSMUSP00000103605	TRANSLATION	protein_coding	-	CCDS50908.1	1	614	0	1.75	0.5	209.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036580	Spg20	ENSMUST00000117341	ENSMUSP00000113968	TRANSLATION	protein_coding	-	-	1	582	0	1.75	0	161.7	0	-4,-5	-	-	9.132	MINOR
ENSMUSG00000036580	Spg20	ENSMUST00000044116	ENSMUSP00000042367	TRANSLATION	protein_coding	-	CCDS38432.1	1	671	0	1.75	0.5	209.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036580	Spg20	ENSMUST00000149767	ENSMUSP00000119719	TRANSLATION	protein_coding	stop	-	5	92	0	1	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004894	Hapln2	ENSMUST00000162352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004894	Hapln2	ENSMUST00000160737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004894	Hapln2	ENSMUST00000160150	ENSMUSP00000125271	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000004894	Hapln2	ENSMUST00000005014	ENSMUSP00000005014	TRANSLATION	protein_coding	-	CCDS17463.1	1	341	0	1.8	6.3	243.9	0	2,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000051777	Iqcj	ENSMUST00000063263	ENSMUSP00000069544	TRANSLATION	protein_coding,RT	-	CCDS57217.1	1	110	0	0	0.5	220.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000027811	4930579G24Rik	ENSMUST00000029388	ENSMUSP00000029388	TRANSLATION	protein_coding	-	CCDS50936.1	1	111	0	0	1.5	148.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000027994	Mcub	ENSMUST00000153506	ENSMUSP00000118170	TRANSLATION	protein_coding	-	CCDS80021.1	1	252	0	2	0.5	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000027994	Mcub	ENSMUST00000146340	ENSMUSP00000115224	TRANSLATION	protein_coding	start/stop	-	3	149	0	2.15	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027994	Mcub	ENSMUST00000029624	ENSMUSP00000029624	TRANSLATION	protein_coding	-	CCDS17839.1	1	345	0	5.1	0.5	214.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000027994	Mcub	ENSMUST00000122961	ENSMUSP00000120660	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000047696	Ccdc144b	ENSMUST00000166644	ENSMUSP00000132995	TRANSLATION	protein_coding	-	CCDS38415.1	5	520	0	0	0.5	128.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047696	Ccdc144b	ENSMUST00000200469	ENSMUSP00000142910	TRANSLATION	protein_coding	-	CCDS38415.1	1	520	0	0	0.5	128.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047696	Ccdc144b	ENSMUST00000196964	ENSMUSP00000142406	TRANSLATION	nonsense_mediated_decay	-	-	1	239	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028086	Fbxw7	ENSMUST00000212597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028086	Fbxw7	ENSMUST00000029727	ENSMUSP00000029727	TRANSLATION	protein_coding	-	CCDS17440.1	1	629	0	8	8.8	233.9	0	1,-3	-	-	14.6	MINOR
ENSMUSG00000028086	Fbxw7	ENSMUST00000151410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028086	Fbxw7	ENSMUST00000107679	ENSMUSP00000103306	TRANSLATION	protein_coding	-	CCDS50940.1	1	710	0	8	6.1	233.9	0	-4,-2	-	-	13.7	MINOR
ENSMUSG00000028086	Fbxw7	ENSMUST00000107675	ENSMUSP00000103302	TRANSLATION	protein_coding	-	-	5	589	0	8	13	233.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028086	Fbxw7	ENSMUST00000107678	ENSMUSP00000103305	TRANSLATION	protein_coding	-	CCDS50940.1	5	710	0	8	6.1	233.9	0	-4,-2	-	-	13.7	MINOR
ENSMUSG00000027879	Sec22b	ENSMUST00000199738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027879	Sec22b	ENSMUST00000122288	ENSMUSP00000113502	TRANSLATION	protein_coding	-	-	1	166	0	3.75	0	92.5	0	-2,-7	-	-	6.582	MINOR
ENSMUSG00000027879	Sec22b	ENSMUST00000130778	ENSMUSP00000117579	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0.75	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000027879	Sec22b	ENSMUST00000029476	ENSMUSP00000029476	TRANSLATION	protein_coding	-	CCDS17658.1	1	215	0	4.75	21.5	149.5	0	-2,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000027879	Sec22b	ENSMUST00000130620	ENSMUSP00000142976	TRANSLATION	protein_coding	-	-	2	62	0	1.75	0	0	0	-3,-7	-	-	0	MINOR
ENSMUSG00000039519	Cyp7b1	ENSMUST00000035625	ENSMUSP00000037487	TRANSLATION	protein_coding	-	CCDS17254.1	1	507	23	4.88	1.5	175.2	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027669	Gnb4	ENSMUST00000184130	ENSMUSP00000138886	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027669	Gnb4	ENSMUST00000143588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027669	Gnb4	ENSMUST00000108234	ENSMUSP00000103869	TRANSLATION	protein_coding	-	CCDS17297.1	1	340	0	7.83	21.5	156.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027669	Gnb4	ENSMUST00000144292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027669	Gnb4	ENSMUST00000193050	ENSMUSP00000141196	TRANSLATION	protein_coding	-	-	5	73	0	2	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000027669	Gnb4	ENSMUST00000192116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027669	Gnb4	ENSMUST00000152901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027669	Gnb4	ENSMUST00000155737	ENSMUSP00000121127	TRANSLATION	protein_coding	-	CCDS17297.1	1	340	0	7.83	21.5	156.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033233	Trim45	ENSMUST00000037409	ENSMUSP00000043389	TRANSLATION	protein_coding	-	CCDS17678.1	1	580	18	2.6	1.5	147.7	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000033233	Trim45	ENSMUST00000094048	ENSMUSP00000091590	TRANSLATION	protein_coding	-	-	5	531	12	2.6	0	117.1	0	-4,-7	-	-	12.162	MINOR
ENSMUSG00000033233	Trim45	ENSMUST00000106980	ENSMUSP00000102593	TRANSLATION	protein_coding	-	CCDS17678.1	1	580	18	2.6	1.5	147.7	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000033233	Trim45	ENSMUST00000134993	ENSMUSP00000115669	TRANSLATION	protein_coding	-	CCDS51018.1	1	757	18	2.6	0.5	147.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000074457	S100a16	ENSMUST00000107335	ENSMUSP00000102958	TRANSLATION	protein_coding	-	CCDS17536.1	5	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000074457	S100a16	ENSMUST00000098910	ENSMUSP00000096509	TRANSLATION	protein_coding	-	CCDS17536.1	1	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000074457	S100a16	ENSMUST00000127008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074457	S100a16	ENSMUST00000107334	ENSMUSP00000102957	TRANSLATION	protein_coding	-	CCDS17536.1	3	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000074457	S100a16	ENSMUST00000098911	ENSMUSP00000096510	TRANSLATION	protein_coding	-	CCDS17536.1	1	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000074457	S100a16	ENSMUST00000107333	ENSMUSP00000102956	TRANSLATION	protein_coding	-	CCDS17536.1	3	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000074457	S100a16	ENSMUST00000150833	ENSMUSP00000119168	TRANSLATION	protein_coding	stop	-	3	72	3	1.75	0	41.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074457	S100a16	ENSMUST00000107331	ENSMUSP00000102954	TRANSLATION	protein_coding	-	CCDS17536.1	2	124	5	2.55	0.5	41.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000070372	Capza1	ENSMUST00000094028	ENSMUSP00000102381	TRANSLATION	protein_coding	-	CCDS38580.1	1	286	0	7.75	16.8	357.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000070372	Capza1	ENSMUST00000195912	ENSMUSP00000142606	TRANSLATION	protein_coding	stop	-	2	112	0	3.25	0	61.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070372	Capza1	ENSMUST00000155476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070372	Capza1	ENSMUST00000196924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074182	Znhit6	ENSMUST00000199033	ENSMUSP00000143306	TRANSLATION	protein_coding	-	CCDS84683.1	1	292	8	1.23	0.5	31.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074182	Znhit6	ENSMUST00000197940	ENSMUSP00000142642	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074182	Znhit6	ENSMUST00000098534	ENSMUSP00000096136	TRANSLATION	protein_coding	-	CCDS38662.1	1	460	8	1.23	1.5	31.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000074182	Znhit6	ENSMUST00000200574	ENSMUSP00000143259	TRANSLATION	protein_coding	stop	-	3	128	8	1.23	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074182	Znhit6	ENSMUST00000197604	ENSMUSP00000143484	TRANSLATION	protein_coding	stop	-	5	185	8	1.23	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074182	Znhit6	ENSMUST00000197474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074182	Znhit6	ENSMUST00000196413	ENSMUSP00000143376	TRANSLATION	protein_coding	stop	-	5	231	8	1.23	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233015	ENSMUSP00000156953	TRANSLATION	nonsense_mediated_decay	-	-	-	180	0	2.03	0	46.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091572	Vmn2r3	ENSMUST00000170244	ENSMUSP00000126165	TRANSLATION	protein_coding	-	CCDS50920.1	5	887	0	4.1896	0.5	467.5	8	-4,-7	-	-	10.428	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000176328	ENSMUSP00000134891	TRANSLATION	protein_coding	-	-	5	909	0	4.75	0	475	8	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233531	ENSMUSP00000156505	TRANSLATION	protein_coding	-	-	-	623	0	4.11	0	275.1	8	2,-2	-	-	4.722	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000232849	ENSMUSP00000156591	TRANSLATION	nonsense_mediated_decay	-	-	-	572	0	3.51	0	244.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233952	ENSMUSP00000156429	TRANSLATION	nonsense_mediated_decay	-	-	-	470	0	2.67	0	221.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000091572	Vmn2r3	ENSMUST00000233938	ENSMUSP00000156667	TRANSLATION	nonsense_mediated_decay	-	-	-	470	0	2.67	0	221.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000094163	Tdpoz5	ENSMUST00000098879	ENSMUSP00000096478	TRANSLATION	protein_coding	-	CCDS17588.1	-	340	0	1	0.5	98.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038777	Sema6c	ENSMUST00000142449	ENSMUSP00000123457	TRANSLATION	nonsense_mediated_decay	-	-	1	124	0	2.082	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000038777	Sema6c	ENSMUST00000131620	ENSMUSP00000138154	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	1.132	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000038777	Sema6c	ENSMUST00000131742	ENSMUSP00000142525	TRANSLATION	protein_coding	stop	-	2	29	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000038777	Sema6c	ENSMUST00000204709	ENSMUSP00000144702	TRANSLATION	nonsense_mediated_decay	-	-	1	124	0	2.082	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000038777	Sema6c	ENSMUST00000134125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038777	Sema6c	ENSMUST00000130662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038777	Sema6c	ENSMUST00000126597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038777	Sema6c	ENSMUST00000168321	ENSMUSP00000129081	TRANSLATION	protein_coding	-	CCDS71289.1	1	963	0	11.222	1.5	400.3	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000038777	Sema6c	ENSMUST00000090821	ENSMUSP00000088331	TRANSLATION	protein_coding	-	CCDS17604.1	5	931	0	11.222	1.5	400.3	2	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000038777	Sema6c	ENSMUST00000090823	ENSMUSP00000088333	TRANSLATION	protein_coding	-	CCDS71289.1	1	963	0	11.222	1.5	400.3	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000038777	Sema6c	ENSMUST00000142306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038777	Sema6c	ENSMUST00000202315	ENSMUSP00000144039	TRANSLATION	protein_coding	-	CCDS17604.1	1	931	0	11.222	1.5	400.3	2	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000038777	Sema6c	ENSMUST00000130814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038777	Sema6c	ENSMUST00000141607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038777	Sema6c	ENSMUST00000107217	ENSMUSP00000102835	TRANSLATION	protein_coding	-	-	1	923	0	10.222	0	333.3	2	4,-1	-	-	5.982	MINOR
ENSMUSG00000043897	Vmn2r2	ENSMUST00000177151	ENSMUSP00000135110	TRANSLATION	protein_coding	-	-	5	908	0	4.21	1.5	525.1	10	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000043897	Vmn2r2	ENSMUST00000077958	ENSMUSP00000077109	TRANSLATION	protein_coding	-	CCDS50919.1	5	824	0	3.68	1.5	522.8	10	-4,-5	-	-	10.8	MINOR
ENSMUSG00000027556	Car1	ENSMUST00000144327	ENSMUSP00000120495	TRANSLATION	protein_coding	stop	-	3	92	4	2.83	0	112.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027556	Car1	ENSMUST00000181860	ENSMUSP00000137926	TRANSLATION	protein_coding	-	CCDS17248.1	1	261	6	6.33	11.3	311.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027556	Car1	ENSMUST00000094365	ENSMUSP00000091925	TRANSLATION	protein_coding	-	CCDS17248.1	1	261	6	6.33	11.3	311.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027919	Lce1g	ENSMUST00000029527	ENSMUSP00000029527	TRANSLATION	protein_coding	-	CCDS17569.1	1	139	0	0	0.5	36.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068523	Gng5	ENSMUST00000090031	ENSMUSP00000087485	TRANSLATION	protein_coding	-	CCDS17903.1	1	68	0	1.6	21.5	56.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000068523	Gng5	ENSMUST00000119130	ENSMUSP00000113018	TRANSLATION	protein_coding	-	-	2	67	0	1	0	35.2	0	-4,-6	-	-	7.464	MINOR
ENSMUSG00000068523	Gng5	ENSMUST00000118280	ENSMUSP00000114014	TRANSLATION	protein_coding	-	CCDS17903.1	1	68	0	1.6	21.5	56.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000091376	Aadacl2	ENSMUST00000169794	ENSMUSP00000129444	TRANSLATION	protein_coding	-	CCDS50917.1	1	401	3	2.03	6.3	27.4	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000037797	Adh4	ENSMUST00000161312	ENSMUSP00000124163	TRANSLATION	protein_coding	stop	-	5	216	12	4.41	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037797	Adh4	ENSMUST00000013458	ENSMUSP00000013458	TRANSLATION	protein_coding	-	CCDS38653.1	1	377	33	7.91	1.5	78	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037797	Adh4	ENSMUST00000162260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049300	Prmt6	ENSMUST00000106567	ENSMUSP00000102177	TRANSLATION	protein_coding	-	CCDS38605.1	-	378	18	1	0.5	37	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049300	Prmt6	ENSMUST00000190378	ENSMUSP00000140836	TRANSLATION	protein_coding	-	CCDS38605.1	1	378	18	1	0.5	37	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049300	Prmt6	ENSMUST00000168412	ENSMUSP00000129801	TRANSLATION	nonsense_mediated_decay	-	-	1	378	18	1	0.5	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039047	Pigk	ENSMUST00000159045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039047	Pigk	ENSMUST00000159899	ENSMUSP00000123772	TRANSLATION	protein_coding	-	CCDS17919.1	1	395	4	5.33	1.5	151.7	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000039047	Pigk	ENSMUST00000200224	ENSMUSP00000142966	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	1.52	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039047	Pigk	ENSMUST00000160651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039047	Pigk	ENSMUST00000162642	ENSMUSP00000123899	TRANSLATION	nonsense_mediated_decay	-	-	1	364	4	5.33	0	151.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039047	Pigk	ENSMUST00000051510	ENSMUSP00000142742	TRANSLATION	nonsense_mediated_decay	start	-	1	33	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039047	Pigk	ENSMUST00000161596	ENSMUSP00000123753	TRANSLATION	nonsense_mediated_decay	-	-	1	362	4	5.33	0	151.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039047	Pigk	ENSMUST00000162835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039047	Pigk	ENSMUST00000045029	ENSMUSP00000045351	TRANSLATION	protein_coding	-	CCDS17920.1	1	442	4	4.83	0.5	131.9	0	3,-2	-	-	13.81	MINOR
ENSMUSG00000037730	Mynn	ENSMUST00000195396	ENSMUSP00000141623	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1.1	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037730	Mynn	ENSMUST00000193736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037730	Mynn	ENSMUST00000194587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037730	Mynn	ENSMUST00000192715	ENSMUSP00000141951	TRANSLATION	protein_coding	-	CCDS17284.1	1	610	32	6	6.3	235.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000037730	Mynn	ENSMUST00000047502	ENSMUSP00000041034	TRANSLATION	protein_coding	-	CCDS79891.1	1	582	28	5.25	6.3	211.3	0	-4,-5	-	-	14.39	MINOR
ENSMUSG00000037730	Mynn	ENSMUST00000195751	ENSMUSP00000141450	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1.1	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068893	Sprr2a2	ENSMUST00000090871	ENSMUSP00000088386	TRANSLATION	protein_coding	-	CCDS50975.1	1	83	0	0	0.5	34.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068893	Sprr2a2	ENSMUST00000071805	ENSMUSP00000102950	TRANSLATION	protein_coding	-	CCDS50975.1	1	83	0	0	0.5	34.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069094	Pde7a	ENSMUST00000121951	ENSMUSP00000113173	TRANSLATION	protein_coding	-	-	3	68	0	0	0	0	0	3,-1	-	-	0	MINOR
ENSMUSG00000069094	Pde7a	ENSMUST00000099195	ENSMUSP00000096800	TRANSLATION	protein_coding	-	CCDS50871.1	1	482	8	9.4	11.6	260.2	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000069094	Pde7a	ENSMUST00000129060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069094	Pde7a	ENSMUST00000141621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069094	Pde7a	ENSMUST00000156652	ENSMUSP00000119685	TRANSLATION	nonsense_mediated_decay	-	-	5	176	2	0.9	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069094	Pde7a	ENSMUST00000091314	ENSMUSP00000088863	TRANSLATION	protein_coding	-	CCDS38398.1	1	456	8	9.4	10.8	260.2	0	3,-1	-	-	20.775	PRINCIPAL:3
ENSMUSG00000069094	Pde7a	ENSMUST00000149081	ENSMUSP00000120420	TRANSLATION	nonsense_mediated_decay	start	-	5	31	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069094	Pde7a	ENSMUST00000148590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069094	Pde7a	ENSMUST00000143120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069094	Pde7a	ENSMUST00000139426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028266	Lmo4	ENSMUST00000196264	ENSMUSP00000143035	TRANSLATION	protein_coding	-	-	5	85	8	1	0	56.6	0	-4,-7	-	-	3.594	MINOR
ENSMUSG00000028266	Lmo4	ENSMUST00000134961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028266	Lmo4	ENSMUST00000197652	ENSMUSP00000142551	TRANSLATION	protein_coding	stop	-	5	132	14	2.75	0	104.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028266	Lmo4	ENSMUST00000120539	ENSMUSP00000113840	TRANSLATION	protein_coding	-	CCDS51085.1	1	165	16	3.75	21.5	116.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028266	Lmo4	ENSMUST00000121112	ENSMUSP00000113865	TRANSLATION	protein_coding	-	CCDS51085.1	1	165	16	3.75	21.5	116.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028266	Lmo4	ENSMUST00000148128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028266	Lmo4	ENSMUST00000121796	ENSMUSP00000113513	TRANSLATION	protein_coding	-	CCDS51085.1	1	165	16	3.75	21.5	116.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028266	Lmo4	ENSMUST00000124891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056476	Med12l	ENSMUST00000040846	ENSMUSP00000041859	TRANSLATION	protein_coding	-	-	1	756	0	0	0	620.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000056476	Med12l	ENSMUST00000197374	ENSMUSP00000143419	TRANSLATION	nonsense_mediated_decay	start	-	1	301	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056476	Med12l	ENSMUST00000164225	ENSMUSP00000127038	TRANSLATION	protein_coding	-	-	5	2192	0	0	0	820.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000056476	Med12l	ENSMUST00000199659	ENSMUSP00000142903	TRANSLATION	protein_coding	-	CCDS79912.1	5	2185	0	0	0.5	820.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000056476	Med12l	ENSMUST00000029393	ENSMUSP00000029393	TRANSLATION	protein_coding	-	-	5	756	0	0	0	620.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000056476	Med12l	ENSMUST00000040325	ENSMUSP00000042269	TRANSLATION	protein_coding	-	-	5	2157	0	0	0	819.1	0	-4,-7	-	-	5.904	ALTERNATIVE:2
ENSMUSG00000090066	1110002E22Rik	ENSMUST00000184925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090066	1110002E22Rik	ENSMUST00000163080	ENSMUSP00000123851	TRANSLATION	protein_coding	-	-	5	1786	0	0	0.5	98	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028262	Clca3a2	ENSMUST00000197013	ENSMUSP00000143332	TRANSLATION	protein_coding	start/stop	-	3	254	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028262	Clca3a2	ENSMUST00000029929	ENSMUSP00000029929	TRANSLATION	protein_coding	-	CCDS17887.1	1	902	5	0	1.5	507.7	0	4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000028262	Clca3a2	ENSMUST00000159643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028262	Clca3a2	ENSMUST00000199029	ENSMUSP00000143543	TRANSLATION	protein_coding	start	-	2	189	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000059921	Unc5c	ENSMUST00000151007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059921	Unc5c	ENSMUST00000142762	ENSMUSP00000118212	TRANSLATION	nonsense_mediated_decay	-	-	1	950	3	13.23	12.8	480.4	2	1,-2	-	-	-1	MINOR
ENSMUSG00000059921	Unc5c	ENSMUST00000130636	ENSMUSP00000117487	TRANSLATION	protein_coding	-	-	1	876	3	12.23	0	480.4	2	1,-3	-	-	13.002	MINOR
ENSMUSG00000059921	Unc5c	ENSMUST00000155416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059921	Unc5c	ENSMUST00000200114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059921	Unc5c	ENSMUST00000075282	ENSMUSP00000074758	TRANSLATION	protein_coding	-	CCDS80034.1	1	950	3	13.23	12.8	480.4	2	1,-2	-	-	19	ALTERNATIVE:1
ENSMUSG00000059921	Unc5c	ENSMUST00000106236	ENSMUSP00000101843	TRANSLATION	protein_coding	-	CCDS17873.1	1	931	3	13.23	10.8	480.4	2	1,-2	-	-	18.324	PRINCIPAL:3
ENSMUSG00000059921	Unc5c	ENSMUST00000123631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046722	Cdc42se1	ENSMUST00000107201	ENSMUSP00000102819	TRANSLATION	protein_coding	-	CCDS38545.1	1	80	0	0	15	21.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000046722	Cdc42se1	ENSMUST00000107199	ENSMUSP00000102817	TRANSLATION	protein_coding	-	-	5	52	0	0	0	21.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000046722	Cdc42se1	ENSMUST00000149804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046722	Cdc42se1	ENSMUST00000107200	ENSMUSP00000102818	TRANSLATION	protein_coding	-	-	3	52	0	0	0	21.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000046722	Cdc42se1	ENSMUST00000053872	ENSMUSP00000052986	TRANSLATION	protein_coding	-	CCDS38545.1	1	80	0	0	15	21.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028063	Lmna	ENSMUST00000120377	ENSMUSP00000113093	TRANSLATION	protein_coding	-	CCDS50951.1	1	574	0	6.2	0.5	393.7	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028063	Lmna	ENSMUST00000029699	ENSMUSP00000029699	TRANSLATION	protein_coding	-	CCDS38482.1	1	665	0	6.2	3.9	393.7	0	-4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000028063	Lmna	ENSMUST00000147537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028063	Lmna	ENSMUST00000036252	ENSMUSP00000040265	TRANSLATION	protein_coding	-	CCDS38483.1	1	462	0	5.6	0.5	291.7	0	-4,-5	-	-	4.8	MINOR
ENSMUSG00000028063	Lmna	ENSMUST00000149068	ENSMUSP00000120784	TRANSLATION	protein_coding	stop	-	2	117	0	0.6	0	99.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028063	Lmna	ENSMUST00000135494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028063	Lmna	ENSMUST00000150496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074604	Mgst2	ENSMUST00000162125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074604	Mgst2	ENSMUST00000195423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074604	Mgst2	ENSMUST00000161230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074604	Mgst2	ENSMUST00000161627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074604	Mgst2	ENSMUST00000161590	ENSMUSP00000125670	TRANSLATION	protein_coding	-	-	3	77	0	1.75	3.6	0	1	-2,-5	-	-	2.604	MINOR
ENSMUSG00000074604	Mgst2	ENSMUST00000160753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074604	Mgst2	ENSMUST00000159400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074604	Mgst2	ENSMUST00000159554	ENSMUSP00000141745	TRANSLATION	protein_coding	-	CCDS79903.1	1	82	3	2.5	0.5	36.3	2	-2,-4	-	-	9.57	MINOR
ENSMUSG00000074604	Mgst2	ENSMUST00000099106	ENSMUSP00000096705	TRANSLATION	protein_coding	-	CCDS38428.1	1	147	5	3.982	8.3	61.6	4	-2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000068999	Vmn2r5	ENSMUST00000170270	ENSMUSP00000131925	TRANSLATION	protein_coding	-	CCDS50922.1	5	824	6	3.52	1.5	516.9	8	-4,-5	-	-	16.41	MINOR
ENSMUSG00000068999	Vmn2r5	ENSMUST00000177184	ENSMUSP00000135592	TRANSLATION	protein_coding	-	-	5	911	6	4.25	0.5	519.1	8	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000001865	Cpa3	ENSMUST00000001921	ENSMUSP00000001921	TRANSLATION	protein_coding	-	CCDS17262.1	1	417	9	9.5	3.9	365.4	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001865	Cpa3	ENSMUST00000191659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037211	Spry1	ENSMUST00000108107	ENSMUSP00000103742	TRANSLATION	protein_coding	-	CCDS17322.1	1	313	4	0	0.5	106.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037211	Spry1	ENSMUST00000038569	ENSMUSP00000049292	TRANSLATION	protein_coding	-	CCDS17322.1	1	313	4	0	0.5	106.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037211	Spry1	ENSMUST00000108109	ENSMUSP00000103744	TRANSLATION	protein_coding	-	CCDS17322.1	1	313	4	0	0.5	106.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000049133	Flg2	ENSMUST00000194707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049133	Flg2	ENSMUST00000098884	ENSMUSP00000096482	TRANSLATION	protein_coding	-	-	5	2336	10	1	0	53.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045092	S1pr1	ENSMUST00000055676	ENSMUSP00000050897	TRANSLATION	protein_coding	-	CCDS17781.1	1	382	0	1	8.8	142	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000053897	Slc39a8	ENSMUST00000167390	ENSMUSP00000128245	TRANSLATION	protein_coding	-	CCDS17859.1	5	462	0	0	6.3	247.9	2	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000053897	Slc39a8	ENSMUST00000139953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053897	Slc39a8	ENSMUST00000133810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053897	Slc39a8	ENSMUST00000081978	ENSMUSP00000080640	TRANSLATION	protein_coding	-	CCDS17859.1	1	462	0	0	6.3	247.9	2	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000053897	Slc39a8	ENSMUST00000180196	ENSMUSP00000136634	TRANSLATION	protein_coding	-	CCDS17859.1	5	462	0	0	6.3	247.9	2	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000053897	Slc39a8	ENSMUST00000029810	ENSMUSP00000029810	TRANSLATION	protein_coding	-	CCDS17859.1	1	462	0	0	6.3	247.9	2	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000040339	Fam102b	ENSMUST00000046924	ENSMUSP00000039751	TRANSLATION	protein_coding	-	-	1	339	0	0	0	68.1	0	-4,-6	-	-	4.056	MINOR
ENSMUSG00000040339	Fam102b	ENSMUST00000171143	ENSMUSP00000131904	TRANSLATION	protein_coding	-	CCDS51051.1	1	370	0	0	0.5	100.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068854	H2bc21	ENSMUST00000090781	ENSMUSP00000088287	TRANSLATION	protein_coding	-	CCDS17635.1	-	126	0	1	8.8	87.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042861	Kcna10	ENSMUST00000055064	ENSMUSP00000088118	TRANSLATION	protein_coding	-	CCDS38587.1	1	511	0	0.8	7.6	264.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042861	Kcna10	ENSMUST00000169751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027774	Gfm1	ENSMUST00000161009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027774	Gfm1	ENSMUST00000160529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027774	Gfm1	ENSMUST00000077271	ENSMUSP00000076503	TRANSLATION	protein_coding	-	CCDS38449.1	1	751	19	14.17	1.7	576.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000005628	Tmod4	ENSMUST00000135867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005628	Tmod4	ENSMUST00000107227	ENSMUSP00000102846	TRANSLATION	protein_coding	-	CCDS17601.1	5	345	0	7.164	10.8	202	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005628	Tmod4	ENSMUST00000131597	ENSMUSP00000116341	TRANSLATION	protein_coding	stop	-	5	184	0	3.15	0	202	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005628	Tmod4	ENSMUST00000130545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005628	Tmod4	ENSMUST00000149898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005628	Tmod4	ENSMUST00000005769	ENSMUSP00000005769	TRANSLATION	protein_coding	-	CCDS17601.1	1	345	0	7.164	10.8	202	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041084	Ostc	ENSMUST00000043937	ENSMUSP00000046480	TRANSLATION	protein_coding	-	CCDS38639.1	1	149	0	0	19.5	38.1	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041084	Ostc	ENSMUST00000197152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041084	Ostc	ENSMUST00000197828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000196535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000199193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000196648	ENSMUSP00000142557	TRANSLATION	protein_coding	-	-	3	157	0	3	0	51.4	0	-2,2	-	-	0	MINOR
ENSMUSG00000027710	Acad9	ENSMUST00000011492	ENSMUSP00000011492	TRANSLATION	protein_coding	-	CCDS17310.1	1	625	29	13.61	0.5	306.4	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000027710	Acad9	ENSMUST00000197588	ENSMUSP00000142995	TRANSLATION	nonsense_mediated_decay	start	-	5	160	12	4.514	0	119.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027710	Acad9	ENSMUST00000198987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000196395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000195896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000198050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027710	Acad9	ENSMUST00000197344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074340	Ovgp1	ENSMUST00000163626	ENSMUSP00000132424	TRANSLATION	nonsense_mediated_decay	-	-	5	232	0	4.164	0	125.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074340	Ovgp1	ENSMUST00000000573	ENSMUSP00000000573	TRANSLATION	protein_coding	-	CCDS17716.1	1	721	0	8.094	0.5	267.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000074340	Ovgp1	ENSMUST00000164055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074340	Ovgp1	ENSMUST00000092878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015714	Cers2	ENSMUST00000156850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015714	Cers2	ENSMUST00000134702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015714	Cers2	ENSMUST00000139498	ENSMUSP00000122672	TRANSLATION	protein_coding	stop	-	3	130	0	1.6	0	26.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015714	Cers2	ENSMUST00000133748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015714	Cers2	ENSMUST00000139866	ENSMUSP00000120190	TRANSLATION	protein_coding	stop	-	5	245	0	1.6	0	103.8	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000015714	Cers2	ENSMUST00000015858	ENSMUSP00000015858	TRANSLATION	protein_coding	-	CCDS17612.1	1	380	0	1.6	10.8	161.3	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000015714	Cers2	ENSMUST00000142398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015714	Cers2	ENSMUST00000154055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015714	Cers2	ENSMUST00000129267	ENSMUSP00000121110	TRANSLATION	protein_coding	stop	-	3	220	0	1.6	0	75.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000027660	Skil	ENSMUST00000123532	ENSMUSP00000123522	TRANSLATION	protein_coding	stop	-	2	187	0	1	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027660	Skil	ENSMUST00000029194	ENSMUSP00000029194	TRANSLATION	protein_coding	-	CCDS38408.1	5	675	4	2	1.5	271.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027660	Skil	ENSMUST00000118204	ENSMUSP00000112413	TRANSLATION	protein_coding	-	CCDS38408.1	1	675	4	2	1.5	271.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000027660	Skil	ENSMUST00000118470	ENSMUSP00000113256	TRANSLATION	protein_coding	-	CCDS50886.1	1	629	4	2	1.5	271.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000027660	Skil	ENSMUST00000117728	ENSMUSP00000113054	TRANSLATION	protein_coding	-	CCDS71230.1	1	549	4	2	0.5	271.5	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000027660	Skil	ENSMUST00000144756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038374	Rbm8a	ENSMUST00000196456	ENSMUSP00000143190	TRANSLATION	protein_coding	-	CCDS51005.1	1	174	0	4.657	8.8	66.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038374	Rbm8a	ENSMUST00000199628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038374	Rbm8a	ENSMUST00000198027	ENSMUSP00000143346	TRANSLATION	protein_coding	-	-	3	171	0	3.657	0	66.4	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000038374	Rbm8a	ENSMUST00000200647	ENSMUSP00000142699	TRANSLATION	protein_coding	-	-	2	125	0	3.25	0	66.4	0	-4,-5	-	-	9.186	MINOR
ENSMUSG00000038374	Rbm8a	ENSMUST00000199022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038374	Rbm8a	ENSMUST00000048915	ENSMUSP00000044548	TRANSLATION	protein_coding	-	CCDS79983.1	1	173	0	4.525	6.3	66.4	0	-4,-5	-	-	13.773	MINOR
ENSMUSG00000043542	Zc2hc1a	ENSMUST00000192835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043542	Zc2hc1a	ENSMUST00000193010	ENSMUSP00000141497	TRANSLATION	protein_coding	-	-	1	288	11	0	0	56.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000043542	Zc2hc1a	ENSMUST00000051064	ENSMUSP00000054734	TRANSLATION	protein_coding	-	CCDS17230.1	1	324	11	0	7.5	56.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096225	Lhx8	ENSMUST00000204171	ENSMUSP00000144708	TRANSLATION	nonsense_mediated_decay	start	-	3	68	2	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096225	Lhx8	ENSMUST00000205251	ENSMUSP00000145485	TRANSLATION	protein_coding	-	-	5	346	15	4.83	6.8	172.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000096225	Lhx8	ENSMUST00000203692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096225	Lhx8	ENSMUST00000177846	ENSMUSP00000136047	TRANSLATION	protein_coding	-	CCDS17926.1	1	367	15	4.83	1.5	172.7	0	-4,-5	-	-	18.172	MINOR
ENSMUSG00000096225	Lhx8	ENSMUST00000204403	ENSMUSP00000145516	TRANSLATION	protein_coding	stop	-	2	188	15	2.83	0	103.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000197829	ENSMUSP00000143567	TRANSLATION	nonsense_mediated_decay	start	-	5	80	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000089950	ENSMUSP00000087396	TRANSLATION	protein_coding	-	CCDS51097.1	5	331	3	8.16	14	239.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000038975	Rabggtb	ENSMUST00000198350	ENSMUSP00000142402	TRANSLATION	nonsense_mediated_decay	start	-	5	149	0	3.33	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000196266	ENSMUSP00000142682	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	3.33	0	56.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000196956	ENSMUSP00000143458	TRANSLATION	nonsense_mediated_decay	-	-	1	205	0	4.83	0	130.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000200631	ENSMUSP00000142999	TRANSLATION	nonsense_mediated_decay	-	-	1	162	0	2.066	0	33.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000197147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038975	Rabggtb	ENSMUST00000197438	ENSMUSP00000143551	TRANSLATION	nonsense_mediated_decay	-	-	2	132	0	2	0	33.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000196565	ENSMUSP00000143258	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000200209	ENSMUSP00000143452	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	3.33	0	56.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000167111	ENSMUSP00000129481	TRANSLATION	protein_coding	-	CCDS17923.1	1	339	3	8.16	0.5	239.8	0	-4,-6	-	-	15	MINOR
ENSMUSG00000038975	Rabggtb	ENSMUST00000198094	ENSMUSP00000143701	TRANSLATION	nonsense_mediated_decay	start	-	5	152	0	3.396	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039221	Rpl22l1	ENSMUST00000194092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039221	Rpl22l1	ENSMUST00000043867	ENSMUSP00000043111	TRANSLATION	protein_coding	-	CCDS17278.1	1	122	0	0	15	164.7	0	-4,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000039221	Rpl22l1	ENSMUST00000195519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039221	Rpl22l1	ENSMUST00000193168	ENSMUSP00000141360	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039221	Rpl22l1	ENSMUST00000194649	ENSMUSP00000141510	TRANSLATION	protein_coding	-	CCDS84615.1	1	121	0	0	12.6	164.7	0	-4,-5	-	-	9.316	ALTERNATIVE:1
ENSMUSG00000039221	Rpl22l1	ENSMUST00000191667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039221	Rpl22l1	ENSMUST00000195827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039221	Rpl22l1	ENSMUST00000191691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039221	Rpl22l1	ENSMUST00000195728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049100	Pcdh10	ENSMUST00000193252	ENSMUSP00000141529	TRANSLATION	protein_coding	-	CCDS79902.1	-	896	53	0.8	1.7	458.1	3	4,-1	-	-	18.226	ALTERNATIVE:2
ENSMUSG00000049100	Pcdh10	ENSMUST00000170695	ENSMUSP00000132769	TRANSLATION	protein_coding	-	CCDS50902.1	1	1040	53	0.8	4.1	458.1	3	4,-1	-	-	19	ALTERNATIVE:2
ENSMUSG00000049100	Pcdh10	ENSMUST00000171554	ENSMUSP00000131600	TRANSLATION	protein_coding	-	CCDS50901.1	1	1047	53	0.8	2.9	458.1	3	4,-1	-	-	18.613	ALTERNATIVE:2
ENSMUSG00000049100	Pcdh10	ENSMUST00000166126	ENSMUSP00000131073	TRANSLATION	protein_coding	-	CCDS50903.1	1	1057	53	0.8	2.9	458.1	3	4,-1	-	-	18.613	PRINCIPAL:4
ENSMUSG00000049100	Pcdh10	ENSMUST00000195655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064068	Mtx1	ENSMUST00000174126	ENSMUSP00000133291	TRANSLATION	protein_coding	stop	-	5	172	0	0	0	129.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000174218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000173465	ENSMUSP00000133773	TRANSLATION	nonsense_mediated_decay	start	-	5	68	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000173239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000173477	ENSMUSP00000133282	TRANSLATION	protein_coding	start/stop	-	5	298	0	0	0	207.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000239452	ENSMUSP00000159336	TRANSLATION	protein_coding	-	CCDS17494.2	-	461	0	0	1.5	211.4	2	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000064068	Mtx1	ENSMUST00000118964	ENSMUSP00000114009	TRANSLATION	protein_coding	-	-	5	286	0	0	0	155.9	2	-4,-7	-	-	2.67	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000174324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064068	Mtx1	ENSMUST00000138249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064068	Mtx1	ENSMUST00000073572	ENSMUSP00000073261	TRANSLATION	protein_coding	-	-	1	317	0	0	2.4	211.4	2	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000064068	Mtx1	ENSMUST00000138633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000173475	ENSMUSP00000134110	TRANSLATION	protein_coding	start	-	5	162	0	0	0	41.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000150303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000119222	ENSMUSP00000113986	TRANSLATION	protein_coding	-	-	2	355	0	0	0	185	2	-4,-7	-	-	4.416	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000129055	ENSMUSP00000133537	TRANSLATION	nonsense_mediated_decay	start	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000152789	ENSMUSP00000133623	TRANSLATION	protein_coding	stop	-	5	30	0	0	0	31.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064068	Mtx1	ENSMUST00000156847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000124086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064068	Mtx1	ENSMUST00000173593	ENSMUSP00000133866	TRANSLATION	nonsense_mediated_decay	start	-	5	185	0	0	0	135.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047959	Kcna3	ENSMUST00000052718	ENSMUSP00000050680	TRANSLATION	protein_coding	-	CCDS17730.1	-	528	0	0.7	1.5	273.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028036	Ptgfr	ENSMUST00000128349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028036	Ptgfr	ENSMUST00000106126	ENSMUSP00000101732	TRANSLATION	protein_coding	-	CCDS17913.1	1	366	0	0.6	2.7	61.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028036	Ptgfr	ENSMUST00000029670	ENSMUSP00000029670	TRANSLATION	protein_coding	-	CCDS17913.1	1	366	0	0.6	2.7	61.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027831	Veph1	ENSMUST00000029419	ENSMUSP00000029419	TRANSLATION	protein_coding	-	CCDS17391.1	1	833	0	0	1.5	46.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027831	Veph1	ENSMUST00000107837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027831	Veph1	ENSMUST00000182815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102308	2310046K23Rik	ENSMUST00000193521	ENSMUSP00000141296	TRANSLATION	protein_coding	-	-	1	87	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028186	Uox	ENSMUST00000121133	ENSMUSP00000113649	TRANSLATION	protein_coding	-	-	5	199	0	4.33	0	117.9	0	-4,-5	-	-	1.146	MINOR
ENSMUSG00000028186	Uox	ENSMUST00000199489	ENSMUSP00000143418	TRANSLATION	protein_coding	stop	-	3	228	3	5	0	156.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028186	Uox	ENSMUST00000197320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028186	Uox	ENSMUST00000029837	ENSMUSP00000029837	TRANSLATION	protein_coding	-	CCDS17905.1	1	303	8	7.33	6.4	198.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028186	Uox	ENSMUST00000138921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028186	Uox	ENSMUST00000147409	ENSMUSP00000143299	TRANSLATION	protein_coding	stop	-	3	73	3	1.5	0	34.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094018	S100a2	ENSMUST00000238700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094018	S100a2	ENSMUST00000199225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094018	S100a2	ENSMUST00000238373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094018	S100a2	ENSMUST00000179550	ENSMUSP00000136224	TRANSLATION	protein_coding	-	CCDS57224.1	5	104	4	1.8	0.5	25.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000094018	S100a2	ENSMUST00000238223	-	NO_TRANSLATION	transcribed_unitary_pseudogene
ENSMUSG00000049908	Gja8	ENSMUST00000062944	ENSMUSP00000049532	TRANSLATION	protein_coding	-	CCDS17651.1	1	440	0	0.48	3.9	444.6	0	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068856	Sf3b4	ENSMUST00000153977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068856	Sf3b4	ENSMUST00000076372	ENSMUSP00000075709	TRANSLATION	protein_coding	-	CCDS17630.1	1	424	0	2.5	8.8	131.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000086848	Lce6a	ENSMUST00000170676	ENSMUSP00000128725	TRANSLATION	protein_coding	-	CCDS50976.1	1	81	0	0	1.5	142	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000086848	Lce6a	ENSMUST00000138403	ENSMUSP00000114595	TRANSLATION	protein_coding	-	CCDS50976.1	5	81	0	0	1.5	142	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027684	Mecom	ENSMUST00000195690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027684	Mecom	ENSMUST00000173059	ENSMUSP00000133310	TRANSLATION	protein_coding	start	-	5	843	31	7.372	0	168.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000166001	ENSMUSP00000128563	TRANSLATION	protein_coding	-	-	1	949	38	4.712	0	204.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000027684	Mecom	ENSMUST00000173411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027684	Mecom	ENSMUST00000174428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027684	Mecom	ENSMUST00000174406	ENSMUSP00000133942	TRANSLATION	protein_coding	stop	-	5	52	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000172697	ENSMUSP00000134117	TRANSLATION	protein_coding	stop	-	5	949	30	6.222	0	159.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000170212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027684	Mecom	ENSMUST00000174413	ENSMUSP00000134278	TRANSLATION	protein_coding	start	-	1	606	31	4.58	0	168.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000173495	ENSMUSP00000134626	TRANSLATION	protein_coding	-	-	5	1051	38	4.712	2.7	204.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027684	Mecom	ENSMUST00000061088	ENSMUSP00000051057	TRANSLATION	protein_coding	start/stop	-	-	116	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000108270	ENSMUSP00000103905	TRANSLATION	protein_coding	-	-	5	1042	38	4.712	1.2	204.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000027684	Mecom	ENSMUST00000108271	ENSMUSP00000103906	TRANSLATION	protein_coding	-	-	1	795	31	6.372	0	168.1	0	-4,-5	-	-	7.926	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000173022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027684	Mecom	ENSMUST00000172754	ENSMUSP00000134152	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0.462	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000173899	ENSMUSP00000133410	TRANSLATION	protein_coding	stop	-	5	994	38	7.972	0	204.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027684	Mecom	ENSMUST00000172694	ENSMUSP00000134303	TRANSLATION	protein_coding	-	CCDS17281.2	1	718	31	4.712	0.5	168.1	0	-4,-5	-	-	5.124	MINOR
ENSMUSG00000048581	E130311K13Rik	ENSMUST00000061706	ENSMUSP00000058114	TRANSLATION	protein_coding	-	CCDS38445.1	1	294	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000048581	E130311K13Rik	ENSMUST00000160983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048581	E130311K13Rik	ENSMUST00000162448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038642	Ctss	ENSMUST00000015667	ENSMUSP00000015667	TRANSLATION	protein_coding	-	CCDS71291.1	1	341	4	7	0.5	319.3	0	1,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000038642	Ctss	ENSMUST00000116304	ENSMUSP00000112006	TRANSLATION	protein_coding	-	CCDS50992.1	1	340	4	7	0.5	319.3	0	1,-3	-	-	16	PRINCIPAL:3
ENSMUSG00000015697	Setdb1	ENSMUST00000152260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015697	Setdb1	ENSMUST00000132468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015697	Setdb1	ENSMUST00000107171	ENSMUSP00000102789	TRANSLATION	protein_coding	-	CCDS50991.1	1	1307	29	8.67	0.5	232.2	0	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000015697	Setdb1	ENSMUST00000124638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015697	Setdb1	ENSMUST00000015841	ENSMUSP00000015841	TRANSLATION	protein_coding	-	CCDS17613.1	1	1308	29	8.67	0.5	232.2	0	-2,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000015697	Setdb1	ENSMUST00000107170	ENSMUSP00000102788	TRANSLATION	protein_coding	-	CCDS17613.1	1	1308	29	8.67	0.5	232.2	0	-2,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000068890	Lce1a2	ENSMUST00000029530	ENSMUSP00000029530	TRANSLATION	protein_coding	-	CCDS17564.1	1	149	0	0	0.5	30.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074207	Adh1	ENSMUST00000162032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074207	Adh1	ENSMUST00000159159	ENSMUSP00000124688	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0.66	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074207	Adh1	ENSMUST00000004232	ENSMUSP00000004232	TRANSLATION	protein_coding	-	CCDS17867.1	1	375	34	7.49	10.8	88.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000074207	Adh1	ENSMUST00000161799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041977	Arhgef11	ENSMUST00000136072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041977	Arhgef11	ENSMUST00000152006	ENSMUSP00000122166	TRANSLATION	nonsense_mediated_decay	-	-	1	608	0	9.63	0	281.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041977	Arhgef11	ENSMUST00000039476	ENSMUSP00000039900	TRANSLATION	protein_coding	-	CCDS38472.1	1	1552	0	19.58	0.5	409.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041977	Arhgef11	ENSMUST00000142799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041977	Arhgef11	ENSMUST00000212015	ENSMUSP00000148382	TRANSLATION	protein_coding	stop	-	5	205	0	3.05	0	57.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041977	Arhgef11	ENSMUST00000129113	ENSMUSP00000118123	TRANSLATION	protein_coding	stop	-	1	1475	0	19.58	0	409.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075700	Selenot	ENSMUST00000107924	ENSMUSP00000103557	TRANSLATION	protein_coding	-	CCDS38437.1	1	195	0	0	7.5	56.8	0	3,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000075700	Selenot	ENSMUST00000125815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008604	Ubqln4	ENSMUST00000195498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008604	Ubqln4	ENSMUST00000194303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008604	Ubqln4	ENSMUST00000192962	ENSMUSP00000142145	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008604	Ubqln4	ENSMUST00000192687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008604	Ubqln4	ENSMUST00000008748	ENSMUSP00000008748	TRANSLATION	protein_coding	-	CCDS17479.1	1	596	0	3.63	1.5	84.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033910	Gucy1a1	ENSMUST00000193924	ENSMUSP00000142138	TRANSLATION	protein_coding	-	CCDS17429.1	1	691	7	5.04	6.4	362	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033910	Gucy1a1	ENSMUST00000192289	ENSMUSP00000141478	TRANSLATION	protein_coding	start	-	3	66	0	1	0	25.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033910	Gucy1a1	ENSMUST00000194788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033910	Gucy1a1	ENSMUST00000048976	ENSMUSP00000048918	TRANSLATION	protein_coding	-	CCDS17429.1	1	691	7	5.04	6.4	362	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033910	Gucy1a1	ENSMUST00000191942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050144	Slc25a44	ENSMUST00000057935	ENSMUSP00000057871	TRANSLATION	protein_coding	-	CCDS50950.1	1	333	10	1.38	0.5	174.5	2	-4,-5	-	-	18	MINOR
ENSMUSG00000050144	Slc25a44	ENSMUST00000168755	ENSMUSP00000130075	TRANSLATION	protein_coding	-	CCDS50949.1	1	228	10	0.36	0.5	117.7	2	-4,-5	-	-	10.158	MINOR
ENSMUSG00000050144	Slc25a44	ENSMUST00000193433	ENSMUSP00000141465	TRANSLATION	protein_coding	-	CCDS79943.1	1	314	10	1.38	9.5	174.5	2	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000050144	Slc25a44	ENSMUST00000195657	ENSMUSP00000141780	TRANSLATION	protein_coding	-	CCDS79943.1	1	314	10	1.38	9.5	174.5	2	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027849	Syt6	ENSMUST00000136049	ENSMUSP00000118124	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0	0	0	0	0,2	-	-	-1	MINOR
ENSMUSG00000027849	Syt6	ENSMUST00000151985	ENSMUSP00000119688	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0	0	0	0	1,2	-	-	-1	MINOR
ENSMUSG00000027849	Syt6	ENSMUST00000132325	ENSMUSP00000116324	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	0,2	-	-	-1	MINOR
ENSMUSG00000027849	Syt6	ENSMUST00000118117	ENSMUSP00000112486	TRANSLATION	protein_coding	-	-	1	438	25	4	0	170.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000027849	Syt6	ENSMUST00000183637	ENSMUSP00000138874	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027849	Syt6	ENSMUST00000090697	ENSMUSP00000088196	TRANSLATION	protein_coding	-	CCDS38575.1	5	511	25	4	1.5	170.8	0	1,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000027849	Syt6	ENSMUST00000117221	ENSMUSP00000113373	TRANSLATION	protein_coding	-	CCDS71296.1	1	426	25	4	1.7	170.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000027849	Syt6	ENSMUST00000239027	ENSMUSP00000159100	TRANSLATION	protein_coding	-	-	-	529	25	4	0.5	170.8	0	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000027849	Syt6	ENSMUST00000121834	ENSMUSP00000112997	TRANSLATION	protein_coding	-	CCDS38575.1	1	511	25	4	1.5	170.8	0	1,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000027849	Syt6	ENSMUST00000118563	ENSMUSP00000113287	TRANSLATION	protein_coding	-	CCDS71297.1	1	342	14	2	0.5	86	0	-4,-7	-	-	2.91	MINOR
ENSMUSG00000027564	Cypt12	ENSMUST00000029080	ENSMUSP00000029080	TRANSLATION	protein_coding	-	CCDS50870.1	-	119	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043461	Sptssb	ENSMUST00000171529	ENSMUSP00000131241	TRANSLATION	protein_coding	-	CCDS38453.1	1	76	0	0	9.5	55.4	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000043461	Sptssb	ENSMUST00000051239	ENSMUSP00000062794	TRANSLATION	protein_coding	-	CCDS38453.1	1	76	0	0	9.5	55.4	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000047583	Tyw3	ENSMUST00000052774	ENSMUSP00000057828	TRANSLATION	protein_coding	-	CCDS38680.1	1	257	0	3.32	0.5	195.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047583	Tyw3	ENSMUST00000148680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047583	Tyw3	ENSMUST00000170461	ENSMUSP00000131461	TRANSLATION	protein_coding	-	-	5	144	0	2.42	0.5	136	0	-4,-6	-	-	6.612	MINOR
ENSMUSG00000047583	Tyw3	ENSMUST00000122976	ENSMUSP00000114437	TRANSLATION	protein_coding	stop	-	5	159	0	1.97	0	104.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054312	Mrps21	ENSMUST00000132515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054312	Mrps21	ENSMUST00000072587	ENSMUSP00000130403	TRANSLATION	protein_coding	-	CCDS38550.1	1	87	0	2.25	10.8	56	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054312	Mrps21	ENSMUST00000067298	ENSMUSP00000066990	TRANSLATION	protein_coding	-	CCDS38550.1	1	87	0	2.25	10.8	56	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054312	Mrps21	ENSMUST00000142437	ENSMUSP00000117821	TRANSLATION	protein_coding	stop	-	3	44	0	1.25	0	25.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000160934	ENSMUSP00000123859	TRANSLATION	nonsense_mediated_decay	-	-	1	227	21	5.81	0	169.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000160307	ENSMUSP00000125081	TRANSLATION	protein_coding	-	CCDS50877.1	1	1360	21	8.99	6.3	422.7	0	-4,-5	-	-	20	PRINCIPAL:4
ENSMUSG00000027692	Tnik	ENSMUST00000161214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000162225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000161234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000159236	ENSMUSP00000124681	TRANSLATION	protein_coding	-	CCDS50879.1	1	1323	21	8.99	6.3	422.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000027692	Tnik	ENSMUST00000159308	ENSMUSP00000125466	TRANSLATION	protein_coding	-	-	5	1276	21	8.99	2.4	422.7	0	-4,-5	-	-	18.528	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000161423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027692	Tnik	ENSMUST00000162777	ENSMUSP00000124726	TRANSLATION	protein_coding	-	-	5	1297	21	8.99	2.4	422.7	0	-4,-5	-	-	18.528	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000159680	ENSMUSP00000124876	TRANSLATION	protein_coding	-	CCDS50878.1	1	1352	21	8.99	6.3	422.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000027692	Tnik	ENSMUST00000160518	ENSMUSP00000124011	TRANSLATION	protein_coding	-	-	5	1331	21	8.99	6.3	422.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000027692	Tnik	ENSMUST00000161964	ENSMUSP00000125411	TRANSLATION	protein_coding	-	-	5	1268	21	8.99	2.4	422.7	0	-4,-5	-	-	18.528	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000195094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000193721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000162485	ENSMUSP00000124387	TRANSLATION	protein_coding	-	-	5	1305	21	8.99	2.4	422.7	0	-4,-5	-	-	18.528	MINOR
ENSMUSG00000027692	Tnik	ENSMUST00000162037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000192205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027692	Tnik	ENSMUST00000159733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000197450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000199901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000198626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000196687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000197471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000200238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074238	Ap1ar	ENSMUST00000196392	ENSMUSP00000142961	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074238	Ap1ar	ENSMUST00000200409	ENSMUSP00000143466	TRANSLATION	protein_coding	-	CCDS84673.1	5	265	0	0	6.5	288.6	0	-4,-2	-	-	2.115	MINOR
ENSMUSG00000074238	Ap1ar	ENSMUST00000051737	ENSMUSP00000059669	TRANSLATION	protein_coding	-	CCDS38629.1	3	298	0	0	8.8	492.8	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000074238	Ap1ar	ENSMUST00000197744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000197230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000200536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000200300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000200551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000200277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027676	Ccdc39	ENSMUST00000029222	ENSMUSP00000029222	TRANSLATION	protein_coding	-	CCDS17304.1	1	937	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038526	Car14	ENSMUST00000149202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038526	Car14	ENSMUST00000036181	ENSMUSP00000036983	TRANSLATION	protein_coding	-	CCDS17625.1	1	337	6	6.38	6.3	308.3	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000038526	Car14	ENSMUST00000147962	ENSMUSP00000117464	TRANSLATION	protein_coding	stop	-	3	171	5	3.816	0	184.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038526	Car14	ENSMUST00000126722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049349	Gm5105	ENSMUST00000053318	ENSMUSP00000052388	TRANSLATION	protein_coding	-	-	1	112	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000074212	Dnajb14	ENSMUST00000195903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074212	Dnajb14	ENSMUST00000125226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074212	Dnajb14	ENSMUST00000090178	ENSMUSP00000087641	TRANSLATION	protein_coding	-	CCDS51077.1	1	379	0	2.41	10.8	180.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074212	Dnajb14	ENSMUST00000197711	ENSMUSP00000143194	TRANSLATION	protein_coding	stop	-	5	124	0	1.75	0	93.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059743	Fdps	ENSMUST00000196254	ENSMUSP00000142669	TRANSLATION	protein_coding	start/stop	-	3	240	20	6.37	0	233	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059743	Fdps	ENSMUST00000199668	ENSMUSP00000142393	TRANSLATION	protein_coding	stop	-	5	121	10	2.75	0	87	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059743	Fdps	ENSMUST00000198239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059743	Fdps	ENSMUST00000196921	ENSMUSP00000142704	TRANSLATION	protein_coding	stop	-	2	225	10	3.75	0	108.9	0	0,-4	-	-	-1	MINOR
ENSMUSG00000059743	Fdps	ENSMUST00000081848	ENSMUSP00000080531	TRANSLATION	protein_coding	-	CCDS17488.1	1	353	22	9.25	3.9	293.5	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000059743	Fdps	ENSMUST00000200433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059743	Fdps	ENSMUST00000196709	ENSMUSP00000142770	TRANSLATION	protein_coding	-	CCDS17488.1	5	353	22	9.25	3.9	293.5	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000028271	Gtf2b	ENSMUST00000029938	ENSMUSP00000029938	TRANSLATION	protein_coding	-	CCDS17882.1	1	316	3	6.33	19.5	221.6	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000028271	Gtf2b	ENSMUST00000196311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037161	Mgarp	ENSMUST00000157054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037161	Mgarp	ENSMUST00000038154	ENSMUSP00000040703	TRANSLATION	protein_coding	-	CCDS17338.1	1	283	0	0	0.5	276.5	1	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000037161	Mgarp	ENSMUST00000108046	ENSMUSP00000103681	TRANSLATION	protein_coding	-	-	1	275	0	0	0	210.7	1	-4,-2	-	-	2.052	MINOR
ENSMUSG00000037161	Mgarp	ENSMUST00000145938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037161	Mgarp	ENSMUST00000141156	ENSMUSP00000123126	TRANSLATION	protein_coding	-	-	2	297	0	0	0	262.5	1	-4,-7	-	-	5.16	ALTERNATIVE:2
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000148493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000185128	ENSMUSP00000138870	TRANSLATION	nonsense_mediated_decay	-	-	1	62	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000140357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000148237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000106625	ENSMUSP00000102236	TRANSLATION	protein_coding	-	CCDS84664.1	5	1013	0	0	6.5	0	1	-3,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000040412	5330417C22Rik	ENSMUST00000048012	ENSMUSP00000040128	TRANSLATION	protein_coding	-	CCDS17761.1	1	911	0	0	0.5	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000052544	St6galnac3	ENSMUST00000198775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052544	St6galnac3	ENSMUST00000200576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052544	St6galnac3	ENSMUST00000199707	ENSMUSP00000143030	TRANSLATION	protein_coding	start	-	3	125	5	0.8	0	42.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052544	St6galnac3	ENSMUST00000064460	ENSMUSP00000068598	TRANSLATION	protein_coding	start/stop	-	3	196	8	1.352	0	94.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052544	St6galnac3	ENSMUST00000200397	ENSMUSP00000143747	TRANSLATION	protein_coding	-	CCDS38677.1	1	305	10	1.352	7.1	112.8	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033147	Slc22a15	ENSMUST00000183255	ENSMUSP00000138357	TRANSLATION	nonsense_mediated_decay	-	-	1	245	0	1.66	0	43.7	7	-3,-6	-	-	-1	MINOR
ENSMUSG00000033147	Slc22a15	ENSMUST00000190824	ENSMUSP00000139518	TRANSLATION	protein_coding	-	-	5	389	0	2.255	0	0	8	-3,-6	-	-	1.68	MINOR
ENSMUSG00000033147	Slc22a15	ENSMUST00000182040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033147	Slc22a15	ENSMUST00000182130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033147	Slc22a15	ENSMUST00000183098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033147	Slc22a15	ENSMUST00000183293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033147	Slc22a15	ENSMUST00000106928	ENSMUSP00000102541	TRANSLATION	protein_coding	-	CCDS51022.1	5	544	0	4.415	1.7	94.9	15	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039831	Arhgap29	ENSMUST00000198594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039831	Arhgap29	ENSMUST00000199550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039831	Arhgap29	ENSMUST00000199081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039831	Arhgap29	ENSMUST00000196904	ENSMUSP00000143548	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039831	Arhgap29	ENSMUST00000037958	ENSMUSP00000044624	TRANSLATION	protein_coding	-	CCDS17807.1	1	1266	8	9.07	0.5	174.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039831	Arhgap29	ENSMUST00000198914	ENSMUSP00000143547	TRANSLATION	protein_coding	start	-	1	859	8	4.81	0	174.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039831	Arhgap29	ENSMUST00000197155	ENSMUSP00000142945	TRANSLATION	protein_coding	stop	-	1	780	8	8.18	0	104.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039831	Arhgap29	ENSMUST00000196479	ENSMUSP00000142817	TRANSLATION	protein_coding	stop	-	3	272	0	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039831	Arhgap29	ENSMUST00000196984	ENSMUSP00000143079	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068874	Selenbp1	ENSMUST00000139949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068874	Selenbp1	ENSMUST00000134202	ENSMUSP00000120159	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	2.1	0	177.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068874	Selenbp1	ENSMUST00000145551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068874	Selenbp1	ENSMUST00000090839	ENSMUSP00000088349	TRANSLATION	protein_coding	-	CCDS38540.1	1	472	0	6.38	9.8	738.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068874	Selenbp1	ENSMUST00000140757	ENSMUSP00000118563	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	2.1	0	177.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027823	Gmps	ENSMUST00000029405	ENSMUSP00000029405	TRANSLATION	protein_coding	-	CCDS17383.1	1	693	19	15	11.8	204.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027750	Postn	ENSMUST00000107985	ENSMUSP00000103619	TRANSLATION	protein_coding	-	CCDS57211.1	1	810	0	5.4	0.5	347.8	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027750	Postn	ENSMUST00000154157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027750	Postn	ENSMUST00000150868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027750	Postn	ENSMUST00000143258	ENSMUSP00000116685	TRANSLATION	protein_coding	start	-	2	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000027750	Postn	ENSMUST00000145036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027750	Postn	ENSMUST00000117373	ENSMUSP00000112735	TRANSLATION	protein_coding	-	CCDS57212.1	1	783	0	5.4	0.5	347.8	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027750	Postn	ENSMUST00000127452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027750	Postn	ENSMUST00000073012	ENSMUSP00000072773	TRANSLATION	protein_coding	-	CCDS17351.1	1	811	0	5.4	0.5	347.8	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000027750	Postn	ENSMUST00000081564	ENSMUSP00000080276	TRANSLATION	protein_coding	-	-	5	838	0	5.4	0.5	347.8	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000027800	Tm4sf1	ENSMUST00000029376	ENSMUSP00000029376	TRANSLATION	protein_coding	-	CCDS38433.1	1	202	0	0	6.3	243.2	5	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027800	Tm4sf1	ENSMUST00000196704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027800	Tm4sf1	ENSMUST00000196979	ENSMUSP00000143652	TRANSLATION	protein_coding	-	CCDS38433.1	1	202	0	0	6.3	243.2	5	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027800	Tm4sf1	ENSMUST00000196506	ENSMUSP00000143697	TRANSLATION	protein_coding	stop	-	2	136	0	0	0	154.3	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000027800	Tm4sf1	ENSMUST00000171384	ENSMUSP00000130999	TRANSLATION	protein_coding	-	CCDS38433.1	1	202	0	0	6.3	243.2	5	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000027800	Tm4sf1	ENSMUST00000198030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091091	Kcnmb3	ENSMUST00000164954	ENSMUSP00000130177	TRANSLATION	protein_coding	-	CCDS57206.1	5	239	0	0	1.5	247.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000055030	Sprr2e	ENSMUST00000068399	ENSMUSP00000064652	TRANSLATION	protein_coding	-	CCDS57225.1	1	76	0	0	0.5	70.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028072	Ntrk1	ENSMUST00000029712	ENSMUSP00000029712	TRANSLATION	protein_coding	-	CCDS50947.1	1	799	18	12.985	1.5	405.2	0	1,1	-	-	18	PRINCIPAL:1
ENSMUSG00000027508	Pag1	ENSMUST00000159497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027508	Pag1	ENSMUST00000163022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027508	Pag1	ENSMUST00000108384	ENSMUSP00000104021	TRANSLATION	protein_coding	-	CCDS17235.1	1	429	0	0.95	0.5	680.8	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027508	Pag1	ENSMUST00000161949	ENSMUSP00000124529	TRANSLATION	protein_coding	-	CCDS17235.1	1	429	0	0.95	0.5	680.8	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027508	Pag1	ENSMUST00000159825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027845	Dclre1b	ENSMUST00000198835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027845	Dclre1b	ENSMUST00000063502	ENSMUSP00000067695	TRANSLATION	protein_coding	-	CCDS17695.1	1	415	1	1.8	0.5	41.1	0	-4,-5	-	-	7.038	MINOR
ENSMUSG00000027845	Dclre1b	ENSMUST00000147894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027845	Dclre1b	ENSMUST00000128716	ENSMUSP00000121063	TRANSLATION	nonsense_mediated_decay	-	-	5	81	4	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000027845	Dclre1b	ENSMUST00000106834	ENSMUSP00000102447	TRANSLATION	protein_coding	-	CCDS17694.1	5	541	7	4.71	1.5	40.5	0	-4,-2	-	-	17.91	PRINCIPAL:1
ENSMUSG00000027845	Dclre1b	ENSMUST00000106832	ENSMUSP00000102445	TRANSLATION	protein_coding	-	-	1	213	6	4.21	0	0	0	-4,-2	-	-	10.14	MINOR
ENSMUSG00000027845	Dclre1b	ENSMUST00000029435	ENSMUSP00000029435	TRANSLATION	protein_coding	-	CCDS17694.1	1	541	7	4.71	1.5	40.5	0	-4,-2	-	-	17.91	PRINCIPAL:1
ENSMUSG00000027845	Dclre1b	ENSMUST00000198752	ENSMUSP00000143067	TRANSLATION	protein_coding	start	-	1	98	2	2.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095143	Hsd3b4	ENSMUST00000179429	ENSMUSP00000136588	TRANSLATION	protein_coding	-	CCDS17665.1	2	373	26	1.6	1.5	351.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000095143	Hsd3b4	ENSMUST00000196861	ENSMUSP00000142522	TRANSLATION	protein_coding	-	CCDS17665.1	1	373	26	1.6	1.5	351.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000172590	ENSMUSP00000133480	TRANSLATION	protein_coding	stop	-	2	50	0	0.15	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000174219	ENSMUSP00000133565	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	0.518	0	21.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000173490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028073	Pear1	ENSMUST00000173184	ENSMUSP00000134100	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	55	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000173747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028073	Pear1	ENSMUST00000079083	ENSMUSP00000078090	TRANSLATION	protein_coding	-	CCDS38474.1	5	1034	12	7.218	0.5	170	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000174776	ENSMUSP00000133749	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	55	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000090981	ENSMUSP00000088503	TRANSLATION	protein_coding	-	CCDS38474.1	5	1034	12	7.218	0.5	170	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000173468	ENSMUSP00000133988	TRANSLATION	nonsense_mediated_decay	-	-	5	218	0	1.04	0	55	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000174267	ENSMUSP00000133626	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000029714	ENSMUSP00000029714	TRANSLATION	protein_coding	-	CCDS38474.1	5	1034	12	7.218	0.5	170	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000172621	ENSMUSP00000133474	TRANSLATION	protein_coding	-	CCDS38474.1	1	1034	12	7.218	0.5	170	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000174713	ENSMUSP00000134215	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000172669	ENSMUSP00000134451	TRANSLATION	nonsense_mediated_decay	start	-	3	193	4	2.35	0	59.6	2	-3,-4	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000174759	ENSMUSP00000133323	TRANSLATION	protein_coding	-	CCDS38474.1	1	1034	12	7.218	0.5	170	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028073	Pear1	ENSMUST00000173225	ENSMUSP00000134387	TRANSLATION	nonsense_mediated_decay	-	-	3	67	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028073	Pear1	ENSMUST00000172631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028039	Efna3	ENSMUST00000029673	ENSMUSP00000029673	TRANSLATION	protein_coding	-	CCDS38488.1	1	230	0	2.56	1.5	137.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000028039	Efna3	ENSMUST00000200436	ENSMUSP00000143539	TRANSLATION	protein_coding	-	-	5	204	0	2.2	1.5	137.7	0	2,-2	-	-	11.154	ALTERNATIVE:2
ENSMUSG00000028039	Efna3	ENSMUST00000139439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038170	Pde4dip	ENSMUST00000163531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038170	Pde4dip	ENSMUST00000045243	ENSMUSP00000040905	TRANSLATION	protein_coding	-	CCDS38562.1	1	1118	6	0	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038170	Pde4dip	ENSMUST00000200063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038170	Pde4dip	ENSMUST00000175751	ENSMUSP00000134832	TRANSLATION	nonsense_mediated_decay	-	-	1	564	6	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038170	Pde4dip	ENSMUST00000197791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038170	Pde4dip	ENSMUST00000107038	ENSMUSP00000102653	TRANSLATION	protein_coding	stop	-	1	834	0	0	0	81.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038170	Pde4dip	ENSMUST00000090750	ENSMUSP00000088254	TRANSLATION	protein_coding	-	CCDS79985.1	1	2463	0	0	0.5	132.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000038170	Pde4dip	ENSMUST00000200232	ENSMUSP00000142941	TRANSLATION	protein_coding	stop	-	2	72	0	0	0	79.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038170	Pde4dip	ENSMUST00000168438	ENSMUSP00000131170	TRANSLATION	protein_coding	-	CCDS79984.1	1	2412	0	0	0.5	132.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000040389	Wdr47	ENSMUST00000139626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040389	Wdr47	ENSMUST00000133453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040389	Wdr47	ENSMUST00000051145	ENSMUSP00000057482	TRANSLATION	protein_coding	-	CCDS17765.1	1	920	0	3.835	8.8	69.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040389	Wdr47	ENSMUST00000197398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040389	Wdr47	ENSMUST00000124731	ENSMUSP00000143335	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040389	Wdr47	ENSMUST00000144325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040389	Wdr47	ENSMUST00000123568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027530	Fabp12	ENSMUST00000172126	ENSMUSP00000131101	TRANSLATION	protein_coding	-	CCDS17239.1	1	132	19	3.25	14.8	82.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027530	Fabp12	ENSMUST00000029043	ENSMUSP00000029043	TRANSLATION	protein_coding	-	CCDS17239.1	1	132	19	3.25	14.8	82.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027530	Fabp12	ENSMUST00000119761	ENSMUSP00000112958	TRANSLATION	protein_coding	-	CCDS17239.1	3	132	19	3.25	14.8	82.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027530	Fabp12	ENSMUST00000117917	ENSMUSP00000112464	TRANSLATION	protein_coding	-	CCDS17239.1	1	132	19	3.25	14.8	82.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000048031	Fcrl5	ENSMUST00000178261	ENSMUSP00000136046	TRANSLATION	protein_coding	-	-	5	596	0	3.706	0	145.7	0	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000048031	Fcrl5	ENSMUST00000166297	ENSMUSP00000131176	TRANSLATION	protein_coding	-	CCDS50944.1	5	508	0	2.906	0.5	145.7	0	2,-2	-	-	10.398	MINOR
ENSMUSG00000048031	Fcrl5	ENSMUST00000049926	ENSMUSP00000050151	TRANSLATION	protein_coding	-	CCDS50943.1	5	596	0	3.706	0.5	145.7	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000048031	Fcrl5	ENSMUST00000193229	ENSMUSP00000141311	TRANSLATION	protein_coding	-	CCDS50944.1	1	508	0	2.906	0.5	145.7	0	2,-2	-	-	10.398	MINOR
ENSMUSG00000048031	Fcrl5	ENSMUST00000194102	ENSMUSP00000142210	TRANSLATION	protein_coding	-	CCDS50943.1	1	596	0	3.706	0.5	145.7	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000059834	Sclt1	ENSMUST00000156279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059834	Sclt1	ENSMUST00000140373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059834	Sclt1	ENSMUST00000148769	ENSMUSP00000123392	TRANSLATION	nonsense_mediated_decay	-	-	1	350	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059834	Sclt1	ENSMUST00000191629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059834	Sclt1	ENSMUST00000026866	ENSMUSP00000026866	TRANSLATION	protein_coding	-	CCDS38425.1	5	688	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000059834	Sclt1	ENSMUST00000154773	ENSMUSP00000120108	TRANSLATION	nonsense_mediated_decay	start	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059834	Sclt1	ENSMUST00000146125	ENSMUSP00000117608	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059834	Sclt1	ENSMUST00000142908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090733	Rps27	ENSMUST00000200305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090733	Rps27	ENSMUST00000197028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090733	Rps27	ENSMUST00000197361	ENSMUSP00000143402	TRANSLATION	protein_coding	-	-	3	83	4	2.33	1.2	96	0	-4,-5	-	-	15.516	MINOR
ENSMUSG00000090733	Rps27	ENSMUST00000195998	ENSMUSP00000142942	TRANSLATION	protein_coding	-	-	5	52	4	1.33	4.8	92.8	0	-3,-6	-	-	13.526	MINOR
ENSMUSG00000090733	Rps27	ENSMUST00000196196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090733	Rps27	ENSMUST00000170122	ENSMUSP00000132102	TRANSLATION	protein_coding	-	CCDS50970.1	1	84	4	2.33	19.5	104.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090733	Rps27	ENSMUST00000196205	ENSMUSP00000142536	TRANSLATION	protein_coding	start	-	2	82	4	2.33	19.5	104.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090733	Rps27	ENSMUST00000199031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090733	Rps27	ENSMUST00000199428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000198315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000196577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000198259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000199126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000199535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027799	Nbea	ENSMUST00000199803	ENSMUSP00000159179	TRANSLATION	protein_coding	start	-	5	575	0	6.765	0	245.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027799	Nbea	ENSMUST00000200526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000197395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000196612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027799	Nbea	ENSMUST00000029374	ENSMUSP00000029374	TRANSLATION	protein_coding	-	CCDS50911.1	5	2936	0	13.14	1.5	1237.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095870	Lce1k	ENSMUST00000179917	ENSMUSP00000137052	TRANSLATION	protein_coding	-	CCDS57227.1	2	125	0	0	0.5	38.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028115	Bnipl	ENSMUST00000098871	ENSMUSP00000096468	TRANSLATION	protein_coding	-	CCDS50988.1	1	280	0	0	0.5	186.3	0	-4,-5	-	-	2.658	MINOR
ENSMUSG00000028115	Bnipl	ENSMUST00000137250	ENSMUSP00000115197	TRANSLATION	protein_coding	-	-	5	328	0	0	0	242	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028115	Bnipl	ENSMUST00000125515	ENSMUSP00000120545	TRANSLATION	protein_coding	stop	-	5	259	0	0	0	179.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028115	Bnipl	ENSMUST00000176070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028115	Bnipl	ENSMUST00000107195	ENSMUSP00000102813	TRANSLATION	protein_coding	-	CCDS17609.2	1	356	0	0	3.9	242	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000040037	Negr1	ENSMUST00000175773	ENSMUSP00000135531	TRANSLATION	protein_coding	stop	-	3	122	0	1.485	0	30.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000040037	Negr1	ENSMUST00000041425	ENSMUSP00000041132	TRANSLATION	protein_coding	-	CCDS17931.1	1	329	0	5.87	0.5	132.2	0	1,-2	-	-	11.7	MINOR
ENSMUSG00000040037	Negr1	ENSMUST00000106065	ENSMUSP00000101680	TRANSLATION	protein_coding	-	-	1	329	0	6.02	0.5	132.2	0	1,-2	-	-	12	MINOR
ENSMUSG00000040037	Negr1	ENSMUST00000197246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040037	Negr1	ENSMUST00000074015	ENSMUSP00000073664	TRANSLATION	protein_coding	-	CCDS17930.1	1	348	0	5.87	8.8	132.2	0	1,-2	-	-	14.7	PRINCIPAL:1
ENSMUSG00000015943	Bola1	ENSMUST00000177442	ENSMUSP00000134765	TRANSLATION	protein_coding	-	CCDS17632.1	3	137	0	1	1.5	101.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000015943	Bola1	ENSMUST00000016087	ENSMUSP00000016087	TRANSLATION	protein_coding	-	CCDS17632.1	1	137	0	1	1.5	101.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000015943	Bola1	ENSMUST00000107099	ENSMUSP00000102716	TRANSLATION	protein_coding	-	CCDS17632.1	2	137	0	1	1.5	101.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000044098	Rsbn1	ENSMUST00000185731	ENSMUSP00000140185	TRANSLATION	protein_coding	start/stop	-	3	228	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044098	Rsbn1	ENSMUST00000068879	ENSMUSP00000069246	TRANSLATION	protein_coding	-	CCDS17697.1	1	795	1	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000044098	Rsbn1	ENSMUST00000151927	ENSMUSP00000115693	TRANSLATION	nonsense_mediated_decay	start	-	1	421	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044098	Rsbn1	ENSMUST00000051139	ENSMUSP00000058934	TRANSLATION	protein_coding	-	CCDS17697.1	1	795	1	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074268	Amy2a5	ENSMUST00000144352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074268	Amy2a5	ENSMUST00000098673	ENSMUSP00000096270	TRANSLATION	protein_coding	-	CCDS17775.1	1	508	48	9.8	8.8	118.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000015852	Fcrls	ENSMUST00000146512	ENSMUSP00000115780	TRANSLATION	protein_coding	stop	-	3	176	0	1.996	0	32.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000015852	Fcrls	ENSMUST00000090986	ENSMUSP00000088508	TRANSLATION	protein_coding	-	CCDS38471.1	1	509	0	4.526	1.5	222.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000044505	Lingo4	ENSMUST00000050975	ENSMUSP00000058050	TRANSLATION	protein_coding	-	CCDS17592.1	1	618	0	0.8	1.5	194.6	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050075	Gpr171	ENSMUST00000085040	ENSMUSP00000082115	TRANSLATION	protein_coding	-	CCDS17370.1	1	319	0	0.6	6.5	87.4	0	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054325	Lce3a	ENSMUST00000067318	ENSMUSP00000066468	TRANSLATION	protein_coding	-	CCDS38519.1	1	98	0	0	1.5	103.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000039795	Zfand1	ENSMUST00000125734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039795	Zfand1	ENSMUST00000037839	ENSMUSP00000037459	TRANSLATION	protein_coding	-	CCDS17242.1	1	268	17	3.66	7.5	93.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039795	Zfand1	ENSMUST00000108377	ENSMUSP00000104014	TRANSLATION	protein_coding	-	-	1	207	17	3.66	0	93.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000039795	Zfand1	ENSMUST00000127313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039795	Zfand1	ENSMUST00000183798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039795	Zfand1	ENSMUST00000156414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039795	Zfand1	ENSMUST00000140634	ENSMUSP00000122048	TRANSLATION	protein_coding	start/stop	-	5	247	15	3.16	0	86.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039795	Zfand1	ENSMUST00000184644	ENSMUSP00000139317	TRANSLATION	nonsense_mediated_decay	-	-	3	49	2	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027784	Ppm1l	ENSMUST00000128637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027784	Ppm1l	ENSMUST00000134037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027784	Ppm1l	ENSMUST00000029355	ENSMUSP00000029355	TRANSLATION	protein_coding	-	CCDS17405.1	1	360	13	2.36	17.5	202.8	0	-3,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000027784	Ppm1l	ENSMUST00000193662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002228	Ppm1j	ENSMUST00000197264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002228	Ppm1j	ENSMUST00000002298	ENSMUSP00000002298	TRANSLATION	protein_coding	-	CCDS17703.1	1	507	5	3.16	1.5	82.6	0	-3,1	-	-	17	PRINCIPAL:1
ENSMUSG00000036632	Alg5	ENSMUST00000155273	ENSMUSP00000119260	TRANSLATION	nonsense_mediated_decay	-	-	1	84	4	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000036632	Alg5	ENSMUST00000141191	ENSMUSP00000118818	TRANSLATION	nonsense_mediated_decay	-	-	1	84	4	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000036632	Alg5	ENSMUST00000143387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036632	Alg5	ENSMUST00000044567	ENSMUSP00000035879	TRANSLATION	protein_coding	-	CCDS17353.1	1	324	16	2.725	2.9	85.4	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000027808	Serp1	ENSMUST00000029385	ENSMUSP00000029385	TRANSLATION	protein_coding	-	CCDS38436.1	1	66	0	0	19.5	95.9	0	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000078620	Gm10964	ENSMUST00000106852	ENSMUSP00000102465	TRANSLATION	protein_coding	start/stop	-	5	40	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000048458	Inka2	ENSMUST00000066610	ENSMUSP00000069212	TRANSLATION	protein_coding	-	CCDS17710.1	1	300	0	0	1.5	99.6	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000048458	Inka2	ENSMUST00000098273	ENSMUSP00000095874	TRANSLATION	protein_coding	-	CCDS51035.1	1	281	0	0	1.7	99.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000046203	Sprr2g	ENSMUST00000056590	ENSMUSP00000131798	TRANSLATION	protein_coding	-	-	5	76	0	0	0	76.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046203	Sprr2g	ENSMUST00000189634	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000027932	Slc27a3	ENSMUST00000029541	ENSMUSP00000029541	TRANSLATION	protein_coding	-	CCDS17527.1	1	667	24	5.52	0.5	226.9	1	2,-2	-	-	17.874	PRINCIPAL:1
ENSMUSG00000027932	Slc27a3	ENSMUST00000127064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027932	Slc27a3	ENSMUST00000153978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027932	Slc27a3	ENSMUST00000132041	ENSMUSP00000122599	TRANSLATION	protein_coding	start	-	1	633	24	5.584	0	189.2	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000027932	Slc27a3	ENSMUST00000144572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089696	Spopfm1	ENSMUST00000159517	ENSMUSP00000123868	TRANSLATION	protein_coding	-	-	5	361	0	1	0	115.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000089696	Spopfm1	ENSMUST00000098878	ENSMUSP00000096477	TRANSLATION	protein_coding	start	-	-	365	0	1	0	115.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028145	Them4	ENSMUST00000049822	ENSMUSP00000062841	TRANSLATION	protein_coding	-	CCDS38533.1	1	230	11	4.5	1.5	36.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028145	Them4	ENSMUST00000198494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028145	Them4	ENSMUST00000196824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027908	Tchhl1	ENSMUST00000029516	ENSMUSP00000029516	TRANSLATION	protein_coding	-	CCDS17582.1	1	638	3	0.64	0.5	50.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028173	Wls	ENSMUST00000200191	ENSMUSP00000142774	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000028173	Wls	ENSMUST00000068952	ENSMUSP00000067898	TRANSLATION	protein_coding	-	CCDS38684.1	1	541	0	0	15.3	315.5	8	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000028173	Wls	ENSMUST00000196782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028173	Wls	ENSMUST00000196276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028173	Wls	ENSMUST00000200571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028173	Wls	ENSMUST00000198878	ENSMUSP00000143475	TRANSLATION	protein_coding	-	CCDS38684.1	1	541	0	0	15.3	315.5	8	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000028173	Wls	ENSMUST00000197328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038393	Txnip	ENSMUST00000049093	ENSMUSP00000041467	TRANSLATION	protein_coding	-	CCDS17640.1	1	396	0	5.75	1.5	127.7	0	-4,-6	-	-	11.988	PRINCIPAL:3
ENSMUSG00000038393	Txnip	ENSMUST00000074519	ENSMUSP00000102710	TRANSLATION	protein_coding	-	CCDS38555.1	1	397	0	5.75	0.5	127.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038393	Txnip	ENSMUST00000128221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038393	Txnip	ENSMUST00000196871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038393	Txnip	ENSMUST00000151832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038393	Txnip	ENSMUST00000144639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001016	Ilf2	ENSMUST00000001042	ENSMUSP00000001042	TRANSLATION	protein_coding	-	CCDS17530.1	1	390	15	10.25	8.8	319.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000001016	Ilf2	ENSMUST00000198325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001016	Ilf2	ENSMUST00000198641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001016	Ilf2	ENSMUST00000197644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001016	Ilf2	ENSMUST00000196769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001016	Ilf2	ENSMUST00000198738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027714	Exosc9	ENSMUST00000133854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027714	Exosc9	ENSMUST00000029269	ENSMUSP00000029269	TRANSLATION	protein_coding	-	CCDS17312.1	1	438	0	8.99	2.7	128.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027714	Exosc9	ENSMUST00000131316	ENSMUSP00000117235	TRANSLATION	protein_coding	start	-	2	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027714	Exosc9	ENSMUST00000149041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027714	Exosc9	ENSMUST00000138636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027714	Exosc9	ENSMUST00000136890	ENSMUSP00000121047	TRANSLATION	protein_coding	stop	-	3	147	0	3.83	0	83.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027714	Exosc9	ENSMUST00000156100	ENSMUSP00000143326	TRANSLATION	protein_coding	start	-	5	132	0	3.16	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027714	Exosc9	ENSMUST00000155866	ENSMUSP00000122189	TRANSLATION	nonsense_mediated_decay	-	-	5	242	0	7.16	0	121	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042306	S100a14	ENSMUST00000164481	ENSMUSP00000129862	TRANSLATION	protein_coding	-	CCDS50971.1	2	55	0	1.33	0.5	0	0	-4,-5	-	-	3.426	MINOR
ENSMUSG00000042306	S100a14	ENSMUST00000167598	ENSMUSP00000126821	TRANSLATION	protein_coding	-	CCDS17535.1	1	104	4	2.33	7.5	49.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000042306	S100a14	ENSMUST00000200565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042306	S100a14	ENSMUST00000199538	ENSMUSP00000142428	TRANSLATION	protein_coding	-	CCDS17535.1	2	104	4	2.33	7.5	49.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000027559	Car3	ENSMUST00000195834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027559	Car3	ENSMUST00000029076	ENSMUSP00000029076	TRANSLATION	protein_coding	-	CCDS17250.1	1	260	5	6.25	11.6	304.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000027559	Car3	ENSMUST00000195575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041220	Elovl6	ENSMUST00000197235	ENSMUSP00000143143	TRANSLATION	protein_coding	stop	-	3	200	0	0	0	196.3	7	-2,-5	-	-	-1	MINOR
ENSMUSG00000041220	Elovl6	ENSMUST00000198369	ENSMUSP00000143736	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000041220	Elovl6	ENSMUST00000197070	ENSMUSP00000143131	TRANSLATION	protein_coding	-	-	1	74	0	0	0	31.8	2	-4,-6	-	-	0	MINOR
ENSMUSG00000041220	Elovl6	ENSMUST00000199910	ENSMUSP00000142832	TRANSLATION	protein_coding	-	CCDS38632.1	1	267	0	0	15	233.1	10	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041220	Elovl6	ENSMUST00000071402	ENSMUSP00000071351	TRANSLATION	protein_coding	-	CCDS38632.1	1	267	0	0	15	233.1	10	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000011008	Mcoln2	ENSMUST00000098524	ENSMUSP00000096125	TRANSLATION	protein_coding	-	CCDS38664.1	1	538	0	5.12	5.3	36.9	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000011008	Mcoln2	ENSMUST00000170972	ENSMUSP00000128900	TRANSLATION	protein_coding	start	-	3	113	0	0.48	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000011008	Mcoln2	ENSMUST00000169984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011008	Mcoln2	ENSMUST00000169533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011008	Mcoln2	ENSMUST00000011152	ENSMUSP00000011152	TRANSLATION	protein_coding	-	CCDS38663.1	1	566	0	5.12	1.5	36.9	5	-4,-5	-	-	12.232	MINOR
ENSMUSG00000027835	Pdcd10	ENSMUST00000161137	ENSMUSP00000125752	TRANSLATION	protein_coding	-	CCDS17414.1	1	212	0	6	21.5	212.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027835	Pdcd10	ENSMUST00000029424	ENSMUSP00000029424	TRANSLATION	protein_coding	-	-	5	149	0	4	1.2	143.5	0	-4,-5	-	-	3.922	MINOR
ENSMUSG00000027835	Pdcd10	ENSMUST00000160196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027835	Pdcd10	ENSMUST00000159217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027835	Pdcd10	ENSMUST00000159519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027835	Pdcd10	ENSMUST00000162138	ENSMUSP00000124421	TRANSLATION	protein_coding	stop	-	3	66	0	2	0	57.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015854	Cd5l	ENSMUST00000015998	ENSMUSP00000015998	TRANSLATION	protein_coding	-	CCDS17451.1	1	352	4	1.96	0.5	292.5	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000000563	Atp5pb	ENSMUST00000153666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000563	Atp5pb	ENSMUST00000123959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000563	Atp5pb	ENSMUST00000118209	ENSMUSP00000113022	TRANSLATION	protein_coding	-	CCDS17714.1	5	256	0	4.75	11	147.2	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000563	Atp5pb	ENSMUST00000199311	ENSMUSP00000143734	TRANSLATION	protein_coding	start	-	5	122	0	2.75	0	77.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000563	Atp5pb	ENSMUST00000133320	ENSMUSP00000115496	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000000563	Atp5pb	ENSMUST00000143022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040264	Gbp2b	ENSMUST00000029936	ENSMUSP00000029936	TRANSLATION	protein_coding	-	CCDS38658.1	1	589	15	10	1.5	802.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000102439	Flg	ENSMUST00000179250	ENSMUSP00000141513	TRANSLATION	protein_coding	start/stop	-	-	255	0	0	0	32.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000178008	ENSMUSP00000141981	TRANSLATION	protein_coding	start/stop	-	-	256	0	0	0	31.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000214837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102439	Flg	ENSMUST00000178752	ENSMUSP00000141273	TRANSLATION	protein_coding	start/stop	-	-	252	0	0	0	33.6	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000050758	ENSMUSP00000142294	TRANSLATION	protein_coding	start	-	-	336	0	0	0	32.7	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000216295	-	NO_TRANSLATION	TEC
ENSMUSG00000102439	Flg	ENSMUST00000180293	ENSMUSP00000141844	TRANSLATION	protein_coding	start/stop	-	-	256	0	0	0	31.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000178695	ENSMUSP00000141392	TRANSLATION	protein_coding	start/stop	-	-	259	0	0	0	32.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000179477	ENSMUSP00000141987	TRANSLATION	protein_coding	start/stop	-	-	256	0	0	0	32.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102439	Flg	ENSMUST00000180308	ENSMUSP00000142003	TRANSLATION	protein_coding	stop	-	1	357	5	1	0	47.8	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000043529	Olfr266	ENSMUST00000059486	ENSMUSP00000054070	TRANSLATION	protein_coding	-	CCDS17729.1	-	316	0	0.42	3.9	197.2	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000043529	Olfr266	ENSMUST00000216610	ENSMUSP00000150519	TRANSLATION	protein_coding	-	CCDS17729.1	5	316	0	0.42	3.9	197.2	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000043529	Olfr266	ENSMUST00000213616	ENSMUSP00000149899	TRANSLATION	protein_coding	-	CCDS17729.1	5	316	0	0.42	3.9	197.2	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028093	Acp6	ENSMUST00000133965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000090759	ENSMUSP00000088263	TRANSLATION	protein_coding	-	CCDS17653.1	1	418	6	9.5	0.5	91.1	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028093	Acp6	ENSMUST00000149900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000199346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000139898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000198329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000143234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000146143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028093	Acp6	ENSMUST00000126438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028164	Manba	ENSMUST00000029814	ENSMUSP00000029814	TRANSLATION	protein_coding	-	CCDS17857.1	1	879	6	10.27	0.5	34	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028164	Manba	ENSMUST00000131610	ENSMUSP00000122148	TRANSLATION	nonsense_mediated_decay	-	-	1	186	0	2.56	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000028164	Manba	ENSMUST00000153412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028164	Manba	ENSMUST00000130147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028164	Manba	ENSMUST00000140893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028164	Manba	ENSMUST00000147872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028164	Manba	ENSMUST00000140496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028164	Manba	ENSMUST00000123061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028164	Manba	ENSMUST00000134478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028164	Manba	ENSMUST00000144654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028164	Manba	ENSMUST00000134095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028100	Nudt17	ENSMUST00000171249	ENSMUSP00000129851	TRANSLATION	protein_coding	-	CCDS51008.1	1	296	4	2.17	0.5	63.8	0	-2,0	-	-	16	PRINCIPAL:1
ENSMUSG00000028100	Nudt17	ENSMUST00000200387	ENSMUSP00000142879	TRANSLATION	protein_coding	-	-	1	131	2	0.73	0	27.4	0	-2,0	-	-	6.59	MINOR
ENSMUSG00000028100	Nudt17	ENSMUST00000196773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028100	Nudt17	ENSMUST00000029742	ENSMUSP00000029742	TRANSLATION	protein_coding	-	CCDS51009.1	1	313	3	1.84	0.5	35.3	0	-2,0	-	-	11.406	MINOR
ENSMUSG00000004127	Trmt10a	ENSMUST00000162864	ENSMUSP00000125749	TRANSLATION	protein_coding	-	CCDS17866.1	1	330	18	6.2	0.5	105.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004127	Trmt10a	ENSMUST00000161791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004127	Trmt10a	ENSMUST00000159622	ENSMUSP00000130478	TRANSLATION	protein_coding	stop	-	5	66	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004127	Trmt10a	ENSMUST00000161141	ENSMUSP00000125681	TRANSLATION	protein_coding	stop	-	3	165	0	3.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004127	Trmt10a	ENSMUST00000040321	ENSMUSP00000042082	TRANSLATION	protein_coding	-	CCDS17866.1	1	330	18	6.2	0.5	105.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004127	Trmt10a	ENSMUST00000159481	ENSMUSP00000124465	TRANSLATION	protein_coding	stop	-	3	100	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028037	Ifi44	ENSMUST00000127733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028037	Ifi44	ENSMUST00000149919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028037	Ifi44	ENSMUST00000133888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028037	Ifi44	ENSMUST00000029671	ENSMUSP00000029671	TRANSLATION	protein_coding	-	CCDS17911.1	1	422	14	0	0.5	22.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027528	Fabp9	ENSMUST00000029038	ENSMUSP00000029038	TRANSLATION	protein_coding	-	CCDS17237.1	1	132	19	3.25	12.8	77.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000027528	Fabp9	ENSMUST00000191678	ENSMUSP00000142000	TRANSLATION	protein_coding	-	-	1	142	19	3.25	0	77.4	0	-4,-7	-	-	18	MINOR
ENSMUSG00000027528	Fabp9	ENSMUST00000193487	ENSMUSP00000141926	TRANSLATION	protein_coding	-	-	3	108	17	2.25	0	49.7	0	-4,-7	-	-	12.522	MINOR
ENSMUSG00000033342	Plppr5	ENSMUST00000238937	ENSMUSP00000159092	TRANSLATION	protein_coding	-	-	-	379	3	0	0	77.8	8	0,-4	-	-	9	MINOR
ENSMUSG00000033342	Plppr5	ENSMUST00000106473	ENSMUSP00000102081	TRANSLATION	protein_coding	-	CCDS80009.1	1	321	3	0	5.1	77.8	8	0,-4	-	-	10.863	MINOR
ENSMUSG00000033342	Plppr5	ENSMUST00000239347	ENSMUSP00000159234	TRANSLATION	protein_coding	-	-	-	260	3	0	0	77.8	5	-4,-7	-	-	9	MINOR
ENSMUSG00000033342	Plppr5	ENSMUST00000039564	ENSMUSP00000045121	TRANSLATION	protein_coding	-	CCDS17796.1	1	316	3	0	7.6	77.8	8	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000103392	Gm38303	ENSMUST00000192603	ENSMUSP00000141735	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	100	0	0	0	0	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000042747	Krtcap2	ENSMUST00000168900	ENSMUSP00000130372	TRANSLATION	protein_coding	-	CCDS79949.1	3	114	0	0	1.5	162.6	2	-4,-7	-	-	4.944	MINOR
ENSMUSG00000042747	Krtcap2	ENSMUST00000040888	ENSMUSP00000043540	TRANSLATION	protein_coding	-	CCDS50960.1	1	136	0	0	7.4	184.1	3	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000042747	Krtcap2	ENSMUST00000126691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042747	Krtcap2	ENSMUST00000132818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003382	Etv3	ENSMUST00000152010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003382	Etv3	ENSMUST00000170036	ENSMUSP00000127419	TRANSLATION	protein_coding	-	CCDS17453.1	1	513	0	1.8	0.5	117.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000003382	Etv3	ENSMUST00000117293	ENSMUSP00000114047	TRANSLATION	protein_coding	-	-	2	146	0	1.8	0	117.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000003382	Etv3	ENSMUST00000119109	ENSMUSP00000112915	TRANSLATION	protein_coding	-	CCDS17453.1	1	513	0	1.8	0.5	117.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000003382	Etv3	ENSMUST00000136680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027739	Rab33b	ENSMUST00000192172	ENSMUSP00000142215	TRANSLATION	protein_coding	stop	-	5	65	11	1	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027739	Rab33b	ENSMUST00000195715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027739	Rab33b	ENSMUST00000054387	ENSMUSP00000063054	TRANSLATION	protein_coding	-	CCDS38427.1	1	229	22	2.5	11.6	171.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037652	Phc3	ENSMUST00000150939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037652	Phc3	ENSMUST00000129817	ENSMUSP00000114916	TRANSLATION	protein_coding	-	CCDS17288.1	1	981	4	3.3	2.9	54.6	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000037652	Phc3	ENSMUST00000124472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037652	Phc3	ENSMUST00000152357	ENSMUSP00000117614	TRANSLATION	nonsense_mediated_decay	-	-	1	232	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037652	Phc3	ENSMUST00000168645	ENSMUSP00000130142	TRANSLATION	protein_coding	-	CCDS17288.1	1	981	4	3.3	2.9	54.6	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000037652	Phc3	ENSMUST00000099163	ENSMUSP00000096767	TRANSLATION	protein_coding	-	-	1	715	0	0.7	0	0	0	-4,-5	-	-	0.798	MINOR
ENSMUSG00000037652	Phc3	ENSMUST00000108255	ENSMUSP00000103890	TRANSLATION	protein_coding	-	CCDS50884.1	1	948	4	3.3	0.5	54.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037652	Phc3	ENSMUST00000046624	ENSMUSP00000037862	TRANSLATION	nonsense_mediated_decay	-	-	5	595	0	0	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037652	Phc3	ENSMUST00000177992	ENSMUSP00000136820	TRANSLATION	protein_coding	-	CCDS50884.1	5	948	4	3.3	0.5	54.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037652	Phc3	ENSMUST00000064718	ENSMUSP00000065617	TRANSLATION	protein_coding	-	CCDS50885.1	1	951	4	3.3	0.5	54.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000028149	Rap1gds1	ENSMUST00000195953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028149	Rap1gds1	ENSMUST00000199152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028149	Rap1gds1	ENSMUST00000200262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028149	Rap1gds1	ENSMUST00000029796	ENSMUSP00000029796	TRANSLATION	protein_coding	-	CCDS51082.1	1	558	0	6.498	10.8	112	0	-4,-5	-	-	14.58	MINOR
ENSMUSG00000028149	Rap1gds1	ENSMUST00000196106	ENSMUSP00000143046	TRANSLATION	nonsense_mediated_decay	-	-	2	101	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028149	Rap1gds1	ENSMUST00000196280	ENSMUSP00000143181	TRANSLATION	protein_coding	-	CCDS80033.1	1	606	0	6.678	12.8	112.4	0	-4,-5	-	-	15.64	ALTERNATIVE:1
ENSMUSG00000028149	Rap1gds1	ENSMUST00000198538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028149	Rap1gds1	ENSMUST00000098574	ENSMUSP00000096173	TRANSLATION	protein_coding	-	CCDS51083.1	1	607	0	6.858	12.8	112.4	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000028149	Rap1gds1	ENSMUST00000200396	ENSMUSP00000143517	TRANSLATION	protein_coding	-	-	1	544	0	6.498	0	112	0	-4,-5	-	-	11.256	MINOR
ENSMUSG00000033860	Fgg	ENSMUST00000048486	ENSMUSP00000037018	TRANSLATION	protein_coding	-	CCDS38462.1	1	436	6	7.5	3.9	481.9	0	4,-1	-	-	19	PRINCIPAL:3
ENSMUSG00000033860	Fgg	ENSMUST00000194175	ENSMUSP00000141648	TRANSLATION	protein_coding	-	CCDS84633.1	1	443	6	7.5	1.5	481.9	0	4,-1	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000033882	Rbm46	ENSMUST00000048647	ENSMUSP00000045511	TRANSLATION	protein_coding	-	CCDS50938.1	5	533	0	1.4	7.6	218.5	0	-4,-5	-	-	14.994	PRINCIPAL:3
ENSMUSG00000033882	Rbm46	ENSMUST00000182637	ENSMUSP00000138728	TRANSLATION	protein_coding	-	-	5	470	0	1.4	2.4	218.6	0	-4,-5	-	-	12.636	MINOR
ENSMUSG00000033882	Rbm46	ENSMUST00000182818	ENSMUSP00000138429	TRANSLATION	protein_coding	-	CCDS71255.1	5	485	0	1.4	7.5	218.5	0	-4,-5	-	-	14.949	ALTERNATIVE:1
ENSMUSG00000001018	Snapin	ENSMUST00000184877	ENSMUSP00000139315	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001018	Snapin	ENSMUST00000149884	ENSMUSP00000122090	TRANSLATION	protein_coding	-	CCDS17531.1	1	136	0	0	8.8	96.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000001018	Snapin	ENSMUST00000185005	ENSMUSP00000139160	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001018	Snapin	ENSMUST00000107352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001018	Snapin	ENSMUST00000107351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000065380	ENSMUSP00000069922	TRANSLATION	protein_coding	-	CCDS71256.1	1	744	12	5.854	10.6	329.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027993	Trim2	ENSMUST00000107695	ENSMUSP00000103323	TRANSLATION	protein_coding	-	CCDS17437.2	1	761	12	5.854	6.3	329.4	0	-4,-1	-	-	19.656	MINOR
ENSMUSG00000027993	Trim2	ENSMUST00000152953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027993	Trim2	ENSMUST00000132283	ENSMUSP00000118888	TRANSLATION	protein_coding	stop	-	3	191	12	1.664	0	88.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027993	Trim2	ENSMUST00000107691	ENSMUSP00000103319	TRANSLATION	protein_coding	-	CCDS71256.1	1	744	12	5.854	10.6	329.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027993	Trim2	ENSMUST00000197845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027993	Trim2	ENSMUST00000140856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000156347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027993	Trim2	ENSMUST00000136805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027993	Trim2	ENSMUST00000128574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000107693	ENSMUSP00000103321	TRANSLATION	protein_coding	-	CCDS71256.1	1	744	12	5.854	10.6	329.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027993	Trim2	ENSMUST00000147901	ENSMUSP00000121055	TRANSLATION	protein_coding	stop	-	5	128	10	1.664	0	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027993	Trim2	ENSMUST00000107692	ENSMUSP00000103320	TRANSLATION	protein_coding	-	CCDS71256.1	1	744	12	5.854	10.6	329.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027993	Trim2	ENSMUST00000122849	ENSMUSP00000120981	TRANSLATION	protein_coding	stop	-	3	213	12	1.664	0	88.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000027993	Trim2	ENSMUST00000140568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000137596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000054990	ENSMUSP00000049902	TRANSLATION	protein_coding	-	CCDS71257.1	1	770	12	5.854	5.3	329.4	0	-4,-2	-	-	19.344	MINOR
ENSMUSG00000027993	Trim2	ENSMUST00000136651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027993	Trim2	ENSMUST00000154152	ENSMUSP00000115914	TRANSLATION	protein_coding	stop	-	2	71	6	1.064	0	41.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028048	Gba	ENSMUST00000077367	ENSMUSP00000076589	TRANSLATION	protein_coding	-	CCDS17493.1	1	515	10	9	1.5	676.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028048	Gba	ENSMUST00000197738	ENSMUSP00000142401	TRANSLATION	nonsense_mediated_decay	-	-	1	388	8	6	0.5	496.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028048	Gba	ENSMUST00000196887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028048	Gba	ENSMUST00000200124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028048	Gba	ENSMUST00000167998	ENSMUSP00000130660	TRANSLATION	protein_coding	-	CCDS17493.1	1	515	10	9	1.5	676.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000048416	Mlf1	ENSMUST00000061322	ENSMUSP00000058596	TRANSLATION	protein_coding	-	CCDS17395.1	1	282	0	0	1.5	246.6	0	-4,-5	-	-	6.112	MINOR
ENSMUSG00000048416	Mlf1	ENSMUST00000126628	ENSMUSP00000141208	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048416	Mlf1	ENSMUST00000077916	ENSMUSP00000077072	TRANSLATION	protein_coding	-	CCDS17396.1	1	267	0	0	3.9	247.6	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000048416	Mlf1	ENSMUST00000142538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027804	Ppid	ENSMUST00000159505	ENSMUSP00000141423	TRANSLATION	nonsense_mediated_decay	start	-	3	73	5	2.15	0	37.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027804	Ppid	ENSMUST00000029382	ENSMUSP00000029382	TRANSLATION	protein_coding	-	CCDS17417.1	1	370	9	9.25	11.5	176.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000027804	Ppid	ENSMUST00000161460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027804	Ppid	ENSMUST00000160799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027804	Ppid	ENSMUST00000161876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027804	Ppid	ENSMUST00000162690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027907	S100a11	ENSMUST00000029515	ENSMUSP00000029515	TRANSLATION	protein_coding	-	CCDS38525.1	1	98	11	2	1.5	94.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028127	Abcd3	ENSMUST00000197383	ENSMUSP00000142387	TRANSLATION	protein_coding	-	-	5	549	14	5.8	0	328.4	3	-2,2	-	-	11.628	MINOR
ENSMUSG00000028127	Abcd3	ENSMUST00000195965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028127	Abcd3	ENSMUST00000199593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028127	Abcd3	ENSMUST00000196340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028127	Abcd3	ENSMUST00000029770	ENSMUSP00000029770	TRANSLATION	protein_coding	-	CCDS17806.1	1	659	14	6.56	8.5	409.3	3	-2,2	-	-	21	PRINCIPAL:1
ENSMUSG00000028127	Abcd3	ENSMUST00000197662	ENSMUSP00000143487	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000027886	1700013F07Rik	ENSMUST00000138210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027886	1700013F07Rik	ENSMUST00000029485	ENSMUSP00000029485	TRANSLATION	protein_coding	-	CCDS51046.1	1	168	0	0	1.5	103.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027886	1700013F07Rik	ENSMUST00000138375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053706	B430305J03Rik	ENSMUST00000066298	ENSMUSP00000070175	TRANSLATION	protein_coding	-	-	-	176	0	0	0	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000028150	Rorc	ENSMUST00000197040	ENSMUSP00000143763	TRANSLATION	protein_coding	-	CCDS79971.1	1	495	8	7.75	2.9	168.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028150	Rorc	ENSMUST00000198793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028150	Rorc	ENSMUST00000200009	ENSMUSP00000143610	TRANSLATION	protein_coding	-	-	1	347	8	3.75	0	108.2	0	-4,-5	-	-	8.406	MINOR
ENSMUSG00000028150	Rorc	ENSMUST00000029795	ENSMUSP00000029795	TRANSLATION	protein_coding	-	CCDS17591.1	1	516	8	7.75	2.9	168.1	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000037033	Clca3b	ENSMUST00000159989	ENSMUSP00000124581	TRANSLATION	protein_coding	-	CCDS51086.1	1	1044	6	0	0.5	509.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032854	Ugt8a	ENSMUST00000198610	ENSMUSP00000143605	TRANSLATION	protein_coding	-	CCDS17821.1	1	541	17	2.55	11.5	396.4	1	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000032854	Ugt8a	ENSMUST00000196481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032854	Ugt8a	ENSMUST00000057944	ENSMUSP00000050852	TRANSLATION	protein_coding	-	CCDS17821.1	1	541	17	2.55	11.5	396.4	1	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000028019	Pdgfc	ENSMUST00000129285	ENSMUSP00000118970	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000028019	Pdgfc	ENSMUST00000029652	ENSMUSP00000029652	TRANSLATION	protein_coding	-	CCDS17425.1	1	345	3	2.14	4.2	110.4	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000028019	Pdgfc	ENSMUST00000143721	ENSMUSP00000122047	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025437	Usp33	ENSMUST00000197748	ENSMUSP00000142708	TRANSLATION	protein_coding	-	CCDS17918.1	1	909	18	8.899	5.1	359.1	0	-4,-5	-	-	19.664	PRINCIPAL:3
ENSMUSG00000025437	Usp33	ENSMUST00000142969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025437	Usp33	ENSMUST00000198950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025437	Usp33	ENSMUST00000117492	ENSMUSP00000113265	TRANSLATION	protein_coding	-	CCDS57261.1	1	901	18	9.064	5.1	359.2	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000025437	Usp33	ENSMUST00000198596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025437	Usp33	ENSMUST00000197325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025437	Usp33	ENSMUST00000138575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025437	Usp33	ENSMUST00000196811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025437	Usp33	ENSMUST00000026507	ENSMUSP00000026507	TRANSLATION	protein_coding	-	CCDS80064.1	1	897	18	9.064	1.5	355.9	0	-4,-5	-	-	18.046	MINOR
ENSMUSG00000025437	Usp33	ENSMUST00000123237	ENSMUSP00000117590	TRANSLATION	nonsense_mediated_decay	-	-	1	91	6	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025437	Usp33	ENSMUST00000197600	ENSMUSP00000143062	TRANSLATION	nonsense_mediated_decay	start	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027905	Ddx20	ENSMUST00000132008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027905	Ddx20	ENSMUST00000200078	ENSMUSP00000142675	TRANSLATION	nonsense_mediated_decay	-	-	5	139	11	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027905	Ddx20	ENSMUST00000090680	ENSMUSP00000088176	TRANSLATION	protein_coding	-	CCDS38581.1	1	825	14	8.91	1.5	196.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038304	Cd160	ENSMUST00000107074	ENSMUSP00000102689	TRANSLATION	protein_coding	-	CCDS17648.1	1	185	0	0	1.5	34.5	0	0,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000038304	Cd160	ENSMUST00000165991	ENSMUSP00000132363	TRANSLATION	protein_coding	-	CCDS51011.1	3	141	0	0	0.5	34.5	0	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000038304	Cd160	ENSMUST00000047702	ENSMUSP00000037466	TRANSLATION	protein_coding	-	CCDS17648.1	1	185	0	0	1.5	34.5	0	0,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000010538	Tsacc	ENSMUST00000123536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010538	Tsacc	ENSMUST00000010682	ENSMUSP00000010682	TRANSLATION	protein_coding	-	CCDS17467.1	1	124	0	0	2.7	232.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010538	Tsacc	ENSMUST00000107556	ENSMUSP00000103180	TRANSLATION	protein_coding	-	CCDS17467.1	1	124	0	0	2.7	232.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094487	Gm21958	ENSMUST00000178832	ENSMUSP00000137288	TRANSLATION	protein_coding	-	-	2	40	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000053931	Cnn3	ENSMUST00000029773	ENSMUSP00000029773	TRANSLATION	protein_coding	-	CCDS17802.1	1	330	0	4.35	14.3	246.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000053931	Cnn3	ENSMUST00000199499	ENSMUSP00000143159	TRANSLATION	protein_coding	start	-	5	50	0	0	0	45.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053931	Cnn3	ENSMUST00000198649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053931	Cnn3	ENSMUST00000198393	ENSMUSP00000143186	TRANSLATION	protein_coding	stop	-	2	139	0	1.8	0	114.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053931	Cnn3	ENSMUST00000197135	ENSMUSP00000142526	TRANSLATION	protein_coding	-	-	5	284	0	2.85	1.2	207.2	0	-4,-5	-	-	6.702	MINOR
ENSMUSG00000053931	Cnn3	ENSMUST00000198620	ENSMUSP00000143122	TRANSLATION	protein_coding	start	-	3	49	0	0	0	42	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053931	Cnn3	ENSMUST00000199188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053931	Cnn3	ENSMUST00000196671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039756	Dnttip2	ENSMUST00000196338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039756	Dnttip2	ENSMUST00000199627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039756	Dnttip2	ENSMUST00000199449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039756	Dnttip2	ENSMUST00000197215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039756	Dnttip2	ENSMUST00000035776	ENSMUSP00000045043	TRANSLATION	protein_coding	-	CCDS17809.1	1	758	0	0	0.5	127.4	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000027536	Chmp4c	ENSMUST00000029049	ENSMUSP00000029049	TRANSLATION	protein_coding	-	CCDS17243.1	1	232	0	3.35	5.2	178.7	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000027536	Chmp4c	ENSMUST00000191826	ENSMUSP00000141606	TRANSLATION	nonsense_mediated_decay	-	-	2	65	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000100962	Gm29133	ENSMUST00000189155	ENSMUSP00000148230	TRANSLATION	protein_coding	-	-	5	266	0	1.04	0	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039304	Tnfsf10	ENSMUST00000046383	ENSMUSP00000040271	TRANSLATION	protein_coding	-	CCDS17272.1	1	291	0	3.5	1.5	152.7	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039304	Tnfsf10	ENSMUST00000174840	ENSMUSP00000133917	TRANSLATION	protein_coding	-	-	5	228	0	2.9	0	57.4	1	-4,-5	-	-	5.082	MINOR
ENSMUSG00000028010	Gar1	ENSMUST00000029643	ENSMUSP00000029643	TRANSLATION	protein_coding	-	CCDS38634.1	1	231	0	2.33	0.5	134	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028010	Gar1	ENSMUST00000143545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028010	Gar1	ENSMUST00000127864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028010	Gar1	ENSMUST00000134174	ENSMUSP00000115191	TRANSLATION	protein_coding	start	-	2	79	0	1.53	0	48.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028010	Gar1	ENSMUST00000128441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028010	Gar1	ENSMUST00000149071	ENSMUSP00000118752	TRANSLATION	protein_coding	stop	-	2	198	0	2.33	0	134	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041959	S100a10	ENSMUST00000148400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041959	S100a10	ENSMUST00000045756	ENSMUSP00000036949	TRANSLATION	protein_coding	-	CCDS38526.1	1	97	6	2	12.8	53.9	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000041959	S100a10	ENSMUST00000170612	ENSMUSP00000130712	TRANSLATION	protein_coding	-	CCDS38526.1	3	97	6	2	12.8	53.9	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033767	Tmem131l	ENSMUST00000199411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033767	Tmem131l	ENSMUST00000194522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033767	Tmem131l	ENSMUST00000194993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033767	Tmem131l	ENSMUST00000191758	ENSMUSP00000141438	TRANSLATION	protein_coding	-	CCDS38463.1	1	1597	0	0	1.5	60.7	1	-1,1	-	-	6	PRINCIPAL:2
ENSMUSG00000033767	Tmem131l	ENSMUST00000052342	ENSMUSP00000049808	TRANSLATION	protein_coding	-	-	5	1535	0	0	1.5	60.7	1	-1,1	-	-	6	ALTERNATIVE:2
ENSMUSG00000033767	Tmem131l	ENSMUST00000193696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033767	Tmem131l	ENSMUST00000192811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033767	Tmem131l	ENSMUST00000192095	ENSMUSP00000141607	TRANSLATION	protein_coding	-	-	1	1534	0	0	1.5	60.7	1	-1,1	-	-	6	ALTERNATIVE:2
ENSMUSG00000033767	Tmem131l	ENSMUST00000195245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033767	Tmem131l	ENSMUST00000194432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033767	Tmem131l	ENSMUST00000192283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005813	Metap1	ENSMUST00000198492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005813	Metap1	ENSMUST00000199303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005813	Metap1	ENSMUST00000200365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005813	Metap1	ENSMUST00000197531	ENSMUSP00000143048	TRANSLATION	protein_coding	-	-	1	142	7	3.25	0	74.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005813	Metap1	ENSMUST00000029804	ENSMUSP00000029804	TRANSLATION	protein_coding	-	CCDS17869.1	1	386	23	9.75	15.8	248.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005813	Metap1	ENSMUST00000195910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005813	Metap1	ENSMUST00000198700	ENSMUSP00000143215	TRANSLATION	protein_coding	start	-	5	116	5	2.75	0	24.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091405	H4c14	ENSMUST00000171473	ENSMUSP00000129930	TRANSLATION	protein_coding	-	CCDS51002.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043468	Adam30	ENSMUST00000198363	ENSMUSP00000142590	TRANSLATION	protein_coding	stop	-	1	278	6	0.48	0	107.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043468	Adam30	ENSMUST00000050342	ENSMUSP00000060505	TRANSLATION	protein_coding	-	CCDS17660.1	-	732	15	0.96	0.5	353.7	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000048100	Taf13	ENSMUST00000143054	ENSMUSP00000121346	TRANSLATION	protein_coding	-	CCDS17764.1	1	124	0	1.65	15	129.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000048100	Taf13	ENSMUST00000139603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048100	Taf13	ENSMUST00000131814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048100	Taf13	ENSMUST00000056292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027668	Mfn1	ENSMUST00000195334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027668	Mfn1	ENSMUST00000091257	ENSMUSP00000088801	TRANSLATION	protein_coding	-	CCDS17296.1	1	741	13	12.08	9.5	335.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000027668	Mfn1	ENSMUST00000140328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027668	Mfn1	ENSMUST00000151320	ENSMUSP00000120960	TRANSLATION	protein_coding	start	-	2	319	0	1.1	0	161.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027668	Mfn1	ENSMUST00000191661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027668	Mfn1	ENSMUST00000125182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027668	Mfn1	ENSMUST00000137565	ENSMUSP00000117411	TRANSLATION	protein_coding	stop	-	3	189	8	4.33	0	64.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027668	Mfn1	ENSMUST00000118286	ENSMUSP00000113251	TRANSLATION	protein_coding	-	CCDS17296.1	2	741	13	12.08	9.5	335.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000027668	Mfn1	ENSMUST00000147350	ENSMUSP00000116380	TRANSLATION	protein_coding	stop	-	3	239	10	5.83	0	84.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000027668	Mfn1	ENSMUST00000194384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041991	Hrnr	ENSMUST00000093774	ENSMUSP00000091288	TRANSLATION	protein_coding	-	-	1	3411	9	0.8	0.5	53	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000041991	Hrnr	ENSMUST00000090856	ENSMUSP00000088369	TRANSLATION	protein_coding	-	CCDS50979.1	5	3234	9	0.8	0.5	53	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000028163	Nfkb1	ENSMUST00000199588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028163	Nfkb1	ENSMUST00000132668	ENSMUSP00000114798	TRANSLATION	protein_coding	start	-	5	534	0	7.23	0	85.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028163	Nfkb1	ENSMUST00000164430	ENSMUSP00000128345	TRANSLATION	protein_coding	-	CCDS17858.1	1	971	0	17.155	0.5	506.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028163	Nfkb1	ENSMUST00000184550	ENSMUSP00000139044	TRANSLATION	nonsense_mediated_decay	start	-	1	270	0	5.2	0	85.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028163	Nfkb1	ENSMUST00000150007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028163	Nfkb1	ENSMUST00000138602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028163	Nfkb1	ENSMUST00000196469	ENSMUSP00000143601	TRANSLATION	nonsense_mediated_decay	-	-	1	128	0	2.397	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028163	Nfkb1	ENSMUST00000196246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028163	Nfkb1	ENSMUST00000129428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028163	Nfkb1	ENSMUST00000029812	ENSMUSP00000029812	TRANSLATION	protein_coding	-	CCDS17858.1	1	971	0	17.155	0.5	506.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027900	Dram2	ENSMUST00000129053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027900	Dram2	ENSMUST00000029507	ENSMUSP00000029507	TRANSLATION	protein_coding	-	CCDS17724.1	1	180	0	0	1.7	97.7	7	0,-4	-	-	1.422	MINOR
ENSMUSG00000027900	Dram2	ENSMUST00000121034	ENSMUSP00000112680	TRANSLATION	protein_coding	-	CCDS17725.1	1	267	0	0	8.8	178.5	9	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000027900	Dram2	ENSMUST00000151465	ENSMUSP00000117078	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	127	6	0,-4	-	-	-1	MINOR
ENSMUSG00000027900	Dram2	ENSMUST00000132923	ENSMUSP00000118686	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	141.7	6	0,-4	-	-	-1	MINOR
ENSMUSG00000027900	Dram2	ENSMUST00000134396	ENSMUSP00000119227	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	2	0,-4	-	-	-1	MINOR
ENSMUSG00000027900	Dram2	ENSMUST00000067630	ENSMUSP00000063510	TRANSLATION	protein_coding	-	CCDS17725.1	1	267	0	0	8.8	178.5	9	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000027900	Dram2	ENSMUST00000135740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027900	Dram2	ENSMUST00000144746	ENSMUSP00000118821	TRANSLATION	protein_coding	stop	-	5	27	0	0	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000091721	Gimd1	ENSMUST00000163241	ENSMUSP00000126832	TRANSLATION	protein_coding	-	CCDS57257.1	5	217	14	1.7	3.9	99.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000091721	Gimd1	ENSMUST00000212804	ENSMUSP00000148832	TRANSLATION	protein_coding	-	CCDS57257.1	5	217	14	1.7	3.9	99.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000091721	Gimd1	ENSMUST00000212594	ENSMUSP00000148464	TRANSLATION	protein_coding	-	CCDS57257.1	5	217	14	1.7	3.9	99.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000091721	Gimd1	ENSMUST00000196701	ENSMUSP00000142630	TRANSLATION	protein_coding	-	CCDS57257.1	3	217	14	1.7	3.9	99.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000091721	Gimd1	ENSMUST00000212852	ENSMUSP00000148596	TRANSLATION	protein_coding	-	-	5	99	7	0.74	0	37.8	0	-4,-5	-	-	6.222	MINOR
ENSMUSG00000042404	Dennd4b	ENSMUST00000098914	ENSMUSP00000096514	TRANSLATION	protein_coding	-	CCDS38502.2	1	1510	0	1.7	1.7	303.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042404	Dennd4b	ENSMUST00000151648	ENSMUSP00000121350	TRANSLATION	nonsense_mediated_decay	start	-	5	158	0	0.54	0	90.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042404	Dennd4b	ENSMUST00000129564	ENSMUSP00000117354	TRANSLATION	protein_coding	-	-	5	1499	0	1.7	0.5	303.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042404	Dennd4b	ENSMUST00000143803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042404	Dennd4b	ENSMUST00000156358	ENSMUSP00000118483	TRANSLATION	nonsense_mediated_decay	start	-	5	207	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042404	Dennd4b	ENSMUST00000138376	ENSMUSP00000116003	TRANSLATION	protein_coding	start/stop	-	3	264	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000042404	Dennd4b	ENSMUST00000141139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027955	Gask1b	ENSMUST00000145992	ENSMUSP00000120603	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027955	Gask1b	ENSMUST00000135021	ENSMUSP00000117199	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027955	Gask1b	ENSMUST00000118853	ENSMUSP00000114093	TRANSLATION	protein_coding	-	CCDS17422.1	5	517	0	0	1.5	506.6	1	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027955	Gask1b	ENSMUST00000193204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027955	Gask1b	ENSMUST00000029567	ENSMUSP00000029567	TRANSLATION	protein_coding	-	CCDS17422.1	1	517	0	0	1.5	506.6	1	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000202149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000192328	ENSMUSP00000141363	TRANSLATION	protein_coding	-	CCDS17266.1	1	514	0	13.59	17.3	230.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000202747	ENSMUSP00000144436	TRANSLATION	protein_coding	-	CCDS17266.1	1	514	0	13.59	17.3	230.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000200943	ENSMUSP00000144602	TRANSLATION	protein_coding	stop	-	5	54	0	1.75	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000202647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000063988	ENSMUSP00000067164	TRANSLATION	protein_coding	-	CCDS17266.1	1	514	0	13.59	17.3	230.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000201509	ENSMUSP00000144547	TRANSLATION	nonsense_mediated_decay	-	-	5	474	0	12.26	2	214.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000201467	ENSMUSP00000144340	TRANSLATION	protein_coding	start	-	5	67	0	2.16	0	30.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000200793	ENSMUSP00000144138	TRANSLATION	protein_coding	stop	-	5	144	0	3.18	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000202356	ENSMUSP00000144301	TRANSLATION	protein_coding	stop	-	5	74	0	2.58	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027630	Tbl1xr1	ENSMUST00000193734	ENSMUSP00000142184	TRANSLATION	protein_coding	-	CCDS17266.1	1	514	0	13.59	17.3	230.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000027996	Sfrp2	ENSMUST00000154794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027996	Sfrp2	ENSMUST00000029625	ENSMUSP00000029625	TRANSLATION	protein_coding	-	CCDS17434.1	1	295	0	0.8	8.8	151.4	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000027996	Sfrp2	ENSMUST00000140261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028174	Rpe65	ENSMUST00000029824	ENSMUSP00000029824	TRANSLATION	protein_coding	-	CCDS38683.1	1	533	4	12.58	11	362.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028174	Rpe65	ENSMUST00000197771	ENSMUSP00000143390	TRANSLATION	nonsense_mediated_decay	-	-	5	116	0	1.75	0	56.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028174	Rpe65	ENSMUST00000196999	ENSMUSP00000143654	TRANSLATION	protein_coding	-	CCDS38683.1	1	533	4	12.58	11	362.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000068745	Mybphl	ENSMUST00000090563	ENSMUSP00000088051	TRANSLATION	protein_coding	-	CCDS17757.1	1	355	0	5.55	3.9	144.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000054942	Miga1	ENSMUST00000073089	ENSMUSP00000072836	TRANSLATION	protein_coding	-	CCDS17916.1	1	600	0	0	0.5	804.4	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000054942	Miga1	ENSMUST00000068243	ENSMUSP00000068261	TRANSLATION	protein_coding	-	CCDS51096.1	1	536	0	0	1.5	472.4	2	-4,-6	-	-	0	MINOR
ENSMUSG00000054942	Miga1	ENSMUST00000199872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054942	Miga1	ENSMUST00000199963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054942	Miga1	ENSMUST00000196265	ENSMUSP00000142667	TRANSLATION	nonsense_mediated_decay	-	-	3	153	0	0	0	70.3	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000054942	Miga1	ENSMUST00000199397	ENSMUSP00000143008	TRANSLATION	protein_coding	-	-	1	158	0	0	0	70.9	3	-4,-6	-	-	0	MINOR
ENSMUSG00000054942	Miga1	ENSMUST00000199334	ENSMUSP00000143238	TRANSLATION	protein_coding	-	-	1	506	0	0	0	638	2	-4,-6	-	-	0	MINOR
ENSMUSG00000054942	Miga1	ENSMUST00000199443	ENSMUSP00000143643	TRANSLATION	protein_coding	start	-	3	124	0	0	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054942	Miga1	ENSMUST00000200241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032902	Slc16a1	ENSMUST00000046212	ENSMUSP00000045216	TRANSLATION	protein_coding	-	CCDS17702.1	1	493	0	0	1.5	110.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000027673	Ndufb5	ENSMUST00000122290	ENSMUSP00000113602	TRANSLATION	protein_coding	-	-	2	119	0	3.75	0.5	220.3	2	-2,-5	-	-	2.682	MINOR
ENSMUSG00000027673	Ndufb5	ENSMUST00000127477	ENSMUSP00000114963	TRANSLATION	protein_coding	-	CCDS17300.1	1	189	0	6.24	7.5	292.6	2	-2,2	-	-	15	PRINCIPAL:1
ENSMUSG00000027673	Ndufb5	ENSMUST00000029217	ENSMUSP00000029217	TRANSLATION	nonsense_mediated_decay	start	-	3	63	0	1.08	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000027673	Ndufb5	ENSMUST00000139593	ENSMUSP00000115088	TRANSLATION	protein_coding	stop	-	3	172	0	4.33	0	253.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000027673	Ndufb5	ENSMUST00000156174	ENSMUSP00000123596	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	1.08	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000027673	Ndufb5	ENSMUST00000121778	ENSMUSP00000113169	TRANSLATION	protein_coding	-	-	3	181	0	4.99	0	235.3	2	-2,2	-	-	6.06	MINOR
ENSMUSG00000027673	Ndufb5	ENSMUST00000195565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027673	Ndufb5	ENSMUST00000154257	ENSMUSP00000117240	TRANSLATION	protein_coding	start	-	2	135	0	4.33	0	221.6	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000027601	Mtfr1	ENSMUST00000138777	ENSMUSP00000115983	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-2,-1	-	-	-1	MINOR
ENSMUSG00000027601	Mtfr1	ENSMUST00000130806	ENSMUSP00000123464	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	192	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000027601	Mtfr1	ENSMUST00000117529	ENSMUSP00000112824	TRANSLATION	protein_coding	-	CCDS17256.1	1	328	0	0	0.5	270.3	0	-2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027601	Mtfr1	ENSMUST00000132035	ENSMUSP00000117132	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	91.1	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000027601	Mtfr1	ENSMUST00000119865	ENSMUSP00000112752	TRANSLATION	protein_coding	-	CCDS17256.1	1	328	0	0	0.5	270.3	0	-2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000027601	Mtfr1	ENSMUST00000131053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027601	Mtfr1	ENSMUST00000029129	ENSMUSP00000029129	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	58.8	0	-2,-1	-	-	-1	MINOR
ENSMUSG00000027601	Mtfr1	ENSMUST00000130645	ENSMUSP00000119724	TRANSLATION	protein_coding	-	CCDS17256.1	1	328	0	0	0.5	270.3	0	-2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028114	Mettl14	ENSMUST00000174006	ENSMUSP00000133741	TRANSLATION	protein_coding	start/stop	-	3	211	0	3.75	0	144.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028114	Mettl14	ENSMUST00000174323	ENSMUSP00000134198	TRANSLATION	protein_coding	-	-	1	377	0	9.5	0	202.8	0	-4,-7	-	-	7.872	MINOR
ENSMUSG00000028114	Mettl14	ENSMUST00000029759	ENSMUSP00000029759	TRANSLATION	protein_coding	-	CCDS38622.1	1	456	0	11.25	6.3	213.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028114	Mettl14	ENSMUST00000197628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028114	Mettl14	ENSMUST00000090371	ENSMUSP00000087848	TRANSLATION	protein_coding	-	-	1	217	0	6.5	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000003617	Cp	ENSMUST00000173779	ENSMUSP00000133643	TRANSLATION	protein_coding	start	-	3	52	4	0.9	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003617	Cp	ENSMUST00000128615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000129135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000091309	ENSMUSP00000088857	TRANSLATION	protein_coding	-	CCDS38401.1	1	1061	39	19.55	1.5	167	0	4,-1	-	-	17.634	PRINCIPAL:3
ENSMUSG00000003617	Cp	ENSMUST00000173848	ENSMUSP00000133676	TRANSLATION	protein_coding	start	-	5	120	3	3.1188	0	32.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003617	Cp	ENSMUST00000108325	ENSMUSP00000103961	TRANSLATION	protein_coding	-	-	5	1060	39	19.55	1.5	168.1	0	4,-1	-	-	17.7	ALTERNATIVE:2
ENSMUSG00000003617	Cp	ENSMUST00000003714	ENSMUSP00000003714	TRANSLATION	protein_coding	-	CCDS71227.1	1	1085	39	19.7	1.5	168.1	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000003617	Cp	ENSMUST00000172605	ENSMUSP00000134347	TRANSLATION	nonsense_mediated_decay	start	-	5	58	1	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003617	Cp	ENSMUST00000108329	ENSMUSP00000103965	TRANSLATION	protein_coding	-	-	5	1086	39	19.7	1.5	167	0	4,-1	-	-	17.934	ALTERNATIVE:2
ENSMUSG00000003617	Cp	ENSMUST00000108328	ENSMUSP00000103964	TRANSLATION	protein_coding	-	CCDS71227.1	1	1085	39	19.7	1.5	168.1	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000003617	Cp	ENSMUST00000174803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000150264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000172860	ENSMUSP00000133374	TRANSLATION	protein_coding	start	-	5	197	13	4.25	0	59.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003617	Cp	ENSMUST00000131454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000131811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003617	Cp	ENSMUST00000125994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074248	4930432M17Rik	ENSMUST00000196899	ENSMUSP00000143360	TRANSLATION	protein_coding	-	CCDS57255.1	1	174	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074248	4930432M17Rik	ENSMUST00000098646	ENSMUSP00000096243	TRANSLATION	protein_coding	-	CCDS57255.1	5	174	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037225	Fgf2	ENSMUST00000150021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037225	Fgf2	ENSMUST00000108120	ENSMUSP00000103755	TRANSLATION	protein_coding	-	-	1	109	6	2.1	0	106.9	0	-4,-5	-	-	13.05	MINOR
ENSMUSG00000037225	Fgf2	ENSMUST00000038885	ENSMUSP00000037694	TRANSLATION	protein_coding	-	-	1	153	7	3	6.2	137.5	0	-4,-5	-	-	19.544	ALTERNATIVE:1
ENSMUSG00000037225	Fgf2	ENSMUST00000145228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037225	Fgf2	ENSMUST00000200585	ENSMUSP00000143094	TRANSLATION	protein_coding	-	CCDS17320.1	1	154	7	3	6.2	145.1	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000037225	Fgf2	ENSMUST00000199938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037225	Fgf2	ENSMUST00000091203	ENSMUSP00000088742	TRANSLATION	protein_coding	-	-	1	112	6	2.1	0	107.6	0	-4,-6	-	-	13.092	MINOR
ENSMUSG00000037225	Fgf2	ENSMUST00000138563	ENSMUSP00000122227	TRANSLATION	protein_coding	-	CCDS17320.1	5	154	7	3	6.2	145.1	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000091175	S100a7l2	ENSMUST00000166173	ENSMUSP00000130512	TRANSLATION	protein_coding	-	CCDS50973.1	1	92	0	0	0.5	32.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000001017	Chtop	ENSMUST00000076639	ENSMUSP00000075936	TRANSLATION	protein_coding	-	CCDS79966.1	1	202	0	0	8.3	76.8	0	-4,-7	-	-	8.646	ALTERNATIVE:1
ENSMUSG00000001017	Chtop	ENSMUST00000131868	ENSMUSP00000123448	TRANSLATION	protein_coding	stop	-	3	123	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000107344	ENSMUSP00000102967	TRANSLATION	protein_coding	-	CCDS17532.1	1	224	0	0	0.5	81.6	0	-4,-1	-	-	6	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000146740	ENSMUSP00000116945	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000107342	ENSMUSP00000102965	TRANSLATION	protein_coding	-	CCDS79964.1	1	177	0	0	0.5	76.8	0	-4,-2	-	-	5.646	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000107346	ENSMUSP00000102969	TRANSLATION	protein_coding	-	CCDS79967.1	1	203	0	0	8.3	76.8	0	-4,-7	-	-	8.646	ALTERNATIVE:1
ENSMUSG00000001017	Chtop	ENSMUST00000001043	ENSMUSP00000001043	TRANSLATION	protein_coding	-	CCDS17532.1	1	224	0	0	0.5	81.6	0	-4,-1	-	-	6	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000107343	ENSMUSP00000102966	TRANSLATION	protein_coding	-	CCDS79965.1	1	178	0	0	0.5	76.8	0	-4,-1	-	-	5.646	MINOR
ENSMUSG00000001017	Chtop	ENSMUST00000049937	ENSMUSP00000061800	TRANSLATION	protein_coding	-	CCDS79968.1	1	249	0	0	7.5	81.6	0	-4,-7	-	-	8.67	PRINCIPAL:4
ENSMUSG00000062410	Hsd3b3	ENSMUST00000107019	ENSMUSP00000102633	TRANSLATION	protein_coding	-	CCDS51016.1	5	373	33	2.2	5.1	380.4	1	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000062410	Hsd3b3	ENSMUST00000107018	ENSMUSP00000102632	TRANSLATION	protein_coding	-	CCDS17668.1	1	318	24	1.6	0.5	251	1	-4,-7	-	-	4.362	MINOR
ENSMUSG00000062410	Hsd3b3	ENSMUST00000125483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062410	Hsd3b3	ENSMUST00000094050	ENSMUSP00000091592	TRANSLATION	protein_coding	-	CCDS17668.1	5	318	24	1.6	0.5	251	1	-4,-7	-	-	4.362	MINOR
ENSMUSG00000062410	Hsd3b3	ENSMUST00000146196	ENSMUSP00000121360	TRANSLATION	protein_coding	stop	-	2	187	28	2	0	247.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062410	Hsd3b3	ENSMUST00000090743	ENSMUSP00000088246	TRANSLATION	protein_coding	-	CCDS51016.1	1	373	33	2.2	5.1	380.4	1	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028034	Fubp1	ENSMUST00000196695	ENSMUSP00000143729	TRANSLATION	protein_coding	-	-	1	643	0	10	0.5	299.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028034	Fubp1	ENSMUST00000199876	ENSMUSP00000143618	TRANSLATION	nonsense_mediated_decay	-	-	1	700	0	10	0	299.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000199202	ENSMUSP00000143204	TRANSLATION	protein_coding	stop	-	1	306	0	5.58	0	130.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000198046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000200207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000199918	ENSMUSP00000142638	TRANSLATION	protein_coding	start	-	2	142	0	0	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000198405	ENSMUSP00000142990	TRANSLATION	protein_coding	start	-	2	174	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000197141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000198227	ENSMUSP00000143370	TRANSLATION	protein_coding	-	-	1	523	0	10	0	245.5	0	-4,-5	-	-	8.736	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000199199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000196739	ENSMUSP00000143101	TRANSLATION	protein_coding	-	-	1	651	0	10	1.5	299.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028034	Fubp1	ENSMUST00000196062	ENSMUSP00000143718	TRANSLATION	nonsense_mediated_decay	-	-	2	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000200524	ENSMUSP00000143354	TRANSLATION	protein_coding	-	-	1	654	0	10	1.5	299.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028034	Fubp1	ENSMUST00000166984	ENSMUSP00000130145	TRANSLATION	protein_coding	-	CCDS38672.1	1	642	0	10	1.5	299.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028034	Fubp1	ENSMUST00000198539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000200452	ENSMUSP00000143019	TRANSLATION	nonsense_mediated_decay	-	-	2	642	0	10	1.5	299.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000106121	ENSMUSP00000101727	TRANSLATION	protein_coding	-	CCDS38672.1	2	642	0	10	1.5	299.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028034	Fubp1	ENSMUST00000199127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028034	Fubp1	ENSMUST00000196429	ENSMUSP00000143478	TRANSLATION	protein_coding	start	-	3	149	0	1.5	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028034	Fubp1	ENSMUST00000200056	ENSMUSP00000143686	TRANSLATION	protein_coding	start	-	3	157	0	0	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027552	E2f5	ENSMUST00000029069	ENSMUSP00000029069	TRANSLATION	protein_coding	-	CCDS38391.1	1	335	0	3.005	0.5	193.6	0	-4,-6	-	-	11.958	PRINCIPAL:2
ENSMUSG00000027552	E2f5	ENSMUST00000165922	ENSMUSP00000127877	TRANSLATION	protein_coding	-	-	5	336	0	3.025	0.5	192.8	0	-4,-6	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000045539	Sprr3	ENSMUST00000058142	ENSMUSP00000056287	TRANSLATION	protein_coding	-	CCDS17558.1	3	238	0	0	0.5	112.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070368	Prok1	ENSMUST00000198732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070368	Prok1	ENSMUST00000197758	ENSMUSP00000143197	TRANSLATION	protein_coding	-	-	1	89	0	1.998	0.5	131.3	0	-4,-6	-	-	9.834	MINOR
ENSMUSG00000070368	Prok1	ENSMUST00000049852	ENSMUSP00000060617	TRANSLATION	protein_coding	-	CCDS38589.1	1	105	0	2.25	5.1	156.2	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000038861	Pi4kb	ENSMUST00000107251	ENSMUSP00000102872	TRANSLATION	protein_coding	-	CCDS79978.1	1	816	0	10.55	7.5	84.5	0	-4,-5	-	-	14.184	ALTERNATIVE:1
ENSMUSG00000038861	Pi4kb	ENSMUST00000133297	ENSMUSP00000123529	TRANSLATION	protein_coding	start	-	5	227	0	3.625	0	86.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038861	Pi4kb	ENSMUST00000072287	ENSMUSP00000072134	TRANSLATION	protein_coding	-	CCDS17599.1	1	801	0	10.05	7.5	84.5	0	-4,-5	-	-	13.182	PRINCIPAL:3
ENSMUSG00000038861	Pi4kb	ENSMUST00000133166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038861	Pi4kb	ENSMUST00000167008	ENSMUSP00000132150	TRANSLATION	protein_coding	-	CCDS79979.1	1	484	0	8.55	2.9	84.5	0	-4,-7	-	-	8.058	MINOR
ENSMUSG00000038861	Pi4kb	ENSMUST00000138209	ENSMUSP00000119833	TRANSLATION	protein_coding	stop	-	5	174	0	1.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038861	Pi4kb	ENSMUST00000125476	ENSMUSP00000121965	TRANSLATION	protein_coding	-	-	5	828	0	10.88	3.6	84.5	0	-4,-5	-	-	13.044	MINOR
ENSMUSG00000063779	Chil4	ENSMUST00000082219	ENSMUSP00000080851	TRANSLATION	protein_coding	-	CCDS17719.1	1	402	2	8.226	1.5	273.4	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000063779	Chil4	ENSMUST00000196128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038712	Mindy1	ENSMUST00000133762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000143498	ENSMUSP00000142400	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038712	Mindy1	ENSMUST00000149568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000039537	ENSMUSP00000043910	TRANSLATION	protein_coding	-	CCDS17611.1	1	459	0	7.1	0.5	131.8	0	-4,-5	-	-	11.604	MINOR
ENSMUSG00000038712	Mindy1	ENSMUST00000135249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000135264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038712	Mindy1	ENSMUST00000152640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000168223	ENSMUSP00000127839	TRANSLATION	protein_coding	-	CCDS17611.1	5	459	0	7.1	0.5	131.8	0	-4,-5	-	-	11.604	MINOR
ENSMUSG00000038712	Mindy1	ENSMUST00000137743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000147963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038712	Mindy1	ENSMUST00000107187	ENSMUSP00000102805	TRANSLATION	protein_coding	-	CCDS57233.1	1	468	0	7.298	5.1	131.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038712	Mindy1	ENSMUST00000153928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054199	Gon4l	ENSMUST00000107498	ENSMUSP00000103122	TRANSLATION	protein_coding	-	CCDS50954.1	1	2242	0	2.2	0.5	24.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000054199	Gon4l	ENSMUST00000081695	ENSMUSP00000080397	TRANSLATION	protein_coding	-	CCDS50954.1	5	2242	0	2.2	0.5	24.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000054199	Gon4l	ENSMUST00000090942	ENSMUSP00000088461	TRANSLATION	protein_coding	-	-	5	2243	0	2.2	0.5	24.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000054199	Gon4l	ENSMUST00000198113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054199	Gon4l	ENSMUST00000212694	ENSMUSP00000148624	TRANSLATION	protein_coding	start/stop	-	2	502	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028069	Gpatch4	ENSMUST00000193398	ENSMUSP00000141786	TRANSLATION	protein_coding	-	CCDS50948.1	1	415	0	0	0.5	37.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028069	Gpatch4	ENSMUST00000029707	ENSMUSP00000029707	TRANSLATION	protein_coding	-	CCDS50948.1	1	415	0	0	0.5	37.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028069	Gpatch4	ENSMUST00000194258	ENSMUSP00000141477	TRANSLATION	protein_coding	stop	-	5	239	0	0	0	37.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028069	Gpatch4	ENSMUST00000166021	ENSMUSP00000132699	TRANSLATION	protein_coding	-	CCDS50948.1	5	415	0	0	0.5	37.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028069	Gpatch4	ENSMUST00000194380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004035	Gstm7	ENSMUST00000124215	ENSMUSP00000118707	TRANSLATION	protein_coding	stop	-	3	119	9	3.58	0	65.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004035	Gstm7	ENSMUST00000004137	ENSMUSP00000004137	TRANSLATION	protein_coding	-	CCDS38595.1	1	218	11	6.58	5.2	128	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000004035	Gstm7	ENSMUST00000106687	ENSMUSP00000102298	TRANSLATION	protein_coding	-	-	3	181	11	5.58	2.4	76.8	0	-4,-7	-	-	13.596	MINOR
ENSMUSG00000004035	Gstm7	ENSMUST00000106688	ENSMUSP00000102299	TRANSLATION	protein_coding	-	-	2	214	11	6.212	0.5	116.9	0	-4,-6	-	-	16.596	MINOR
ENSMUSG00000004035	Gstm7	ENSMUST00000133947	ENSMUSP00000122567	TRANSLATION	protein_coding	stop	-	2	193	11	4.33	0	65.7	0	0,-4	-	-	-1	MINOR
ENSMUSG00000028024	Enpep	ENSMUST00000029658	ENSMUSP00000029658	TRANSLATION	protein_coding	-	CCDS17831.1	1	945	14	18.75	1.5	575.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028024	Enpep	ENSMUST00000170918	ENSMUSP00000128872	TRANSLATION	nonsense_mediated_decay	start	-	5	501	14	9.5	0	320.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028024	Enpep	ENSMUST00000164443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028024	Enpep	ENSMUST00000169240	ENSMUSP00000129759	TRANSLATION	nonsense_mediated_decay	start	-	5	235	2	5.45	0	110.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028024	Enpep	ENSMUST00000165217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103124	Gm37389	ENSMUST00000194885	ENSMUSP00000141340	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	95	0	2	0	51.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000094328	Tdpoz9	ENSMUST00000178458	ENSMUSP00000136564	TRANSLATION	protein_coding	-	CCDS57232.1	-	365	0	1	0.5	98.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094328	Tdpoz9	ENSMUST00000180746	ENSMUSP00000138015	TRANSLATION	protein_coding	-	CCDS57232.1	1	365	0	1	0.5	98.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000027889	Ampd2	ENSMUST00000133129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000149479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000127232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000136712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000102637	ENSMUSP00000099697	TRANSLATION	protein_coding	-	CCDS17749.1	1	798	6	10.24	8.8	447.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000027889	Ampd2	ENSMUST00000102638	ENSMUSP00000099698	TRANSLATION	protein_coding	-	CCDS17749.1	1	798	6	10.24	8.8	447.1	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000027889	Ampd2	ENSMUST00000153626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000078912	ENSMUSP00000077946	TRANSLATION	protein_coding	-	CCDS84663.1	5	824	6	10.24	5.2	447.1	0	-4,-7	-	-	19.614	MINOR
ENSMUSG00000027889	Ampd2	ENSMUST00000125467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027889	Ampd2	ENSMUST00000106667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027775	Mfsd1	ENSMUST00000029344	ENSMUSP00000029344	TRANSLATION	protein_coding	-	CCDS38450.1	1	464	0	0	2.7	104.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000027775	Mfsd1	ENSMUST00000192776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038766	Gabpb2	ENSMUST00000107204	ENSMUSP00000102822	TRANSLATION	protein_coding	-	-	1	167	0	3.066	0	89.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038766	Gabpb2	ENSMUST00000141645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038766	Gabpb2	ENSMUST00000145272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038766	Gabpb2	ENSMUST00000136139	ENSMUSP00000121283	TRANSLATION	protein_coding	-	CCDS17605.1	1	414	0	3	1.5	86.4	0	-4,-5	-	-	11.688	PRINCIPAL:2
ENSMUSG00000038766	Gabpb2	ENSMUST00000098873	ENSMUSP00000096470	TRANSLATION	protein_coding	-	CCDS17605.1	5	414	0	3	1.5	86.4	0	-4,-5	-	-	11.688	PRINCIPAL:2
ENSMUSG00000038766	Gabpb2	ENSMUST00000138862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038766	Gabpb2	ENSMUST00000070774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038766	Gabpb2	ENSMUST00000155555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038766	Gabpb2	ENSMUST00000107209	ENSMUSP00000102827	TRANSLATION	protein_coding	-	CCDS17605.1	1	414	0	3	1.5	86.4	0	-4,-5	-	-	11.688	PRINCIPAL:2
ENSMUSG00000095028	Sirpb1b	ENSMUST00000193767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095028	Sirpb1b	ENSMUST00000192382	ENSMUSP00000142068	TRANSLATION	protein_coding	-	-	5	397	0	4.45	0	148.3	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000095028	Sirpb1b	ENSMUST00000195778	ENSMUSP00000141533	TRANSLATION	protein_coding	stop	-	5	182	0	2.45	0	78.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000095028	Sirpb1b	ENSMUST00000091319	ENSMUSP00000088869	TRANSLATION	protein_coding	-	CCDS50867.1	1	391	0	4.45	0.5	148.3	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000033014	Trim33	ENSMUST00000106860	ENSMUSP00000102473	TRANSLATION	protein_coding	-	CCDS38574.1	1	1123	24	5.35	0.5	176.8	0	-4,-5	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000033014	Trim33	ENSMUST00000198969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033014	Trim33	ENSMUST00000197365	ENSMUSP00000143117	TRANSLATION	protein_coding	start	-	2	291	8	4.54	0	109	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033014	Trim33	ENSMUST00000197779	ENSMUSP00000143749	TRANSLATION	protein_coding	start/stop	-	3	193	6	0.75	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033014	Trim33	ENSMUST00000198706	ENSMUSP00000142585	TRANSLATION	nonsense_mediated_decay	start	-	5	402	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033014	Trim33	ENSMUST00000196678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033014	Trim33	ENSMUST00000029444	ENSMUSP00000029444	TRANSLATION	protein_coding	-	CCDS38573.1	1	1140	24	5.85	0.5	176	0	-4,-5	-	-	17.952	PRINCIPAL:4
ENSMUSG00000027778	Ift80	ENSMUST00000176135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027778	Ift80	ENSMUST00000154741	ENSMUSP00000118406	TRANSLATION	protein_coding	stop	-	5	209	0	3.7	0	12.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027778	Ift80	ENSMUST00000176189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027778	Ift80	ENSMUST00000107812	ENSMUSP00000103442	TRANSLATION	protein_coding	-	CCDS38451.1	5	777	0	5.1	7.6	12.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027778	Ift80	ENSMUST00000029347	ENSMUSP00000029347	TRANSLATION	protein_coding	-	CCDS38451.1	5	777	0	5.1	7.6	12.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000027778	Ift80	ENSMUST00000148031	ENSMUSP00000122919	TRANSLATION	protein_coding	stop	-	5	158	0	2.48	0	12.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027778	Ift80	ENSMUST00000136176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027778	Ift80	ENSMUST00000176754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027778	Ift80	ENSMUST00000169064	ENSMUSP00000133263	TRANSLATION	protein_coding	-	-	1	777	0	4.92	7.6	12.5	0	-4,-5	-	-	14.64	PRINCIPAL:1
ENSMUSG00000027778	Ift80	ENSMUST00000152502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027778	Ift80	ENSMUST00000192467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027778	Ift80	ENSMUST00000136448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038205	Prkab2	ENSMUST00000152731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038205	Prkab2	ENSMUST00000045743	ENSMUSP00000036410	TRANSLATION	protein_coding	-	CCDS17657.1	1	271	0	6.3	10.3	217.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038205	Prkab2	ENSMUST00000130924	ENSMUSP00000116622	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038205	Prkab2	ENSMUST00000143927	ENSMUSP00000115749	TRANSLATION	nonsense_mediated_decay	-	-	5	179	0	3.8	0	123.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038205	Prkab2	ENSMUST00000132719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038205	Prkab2	ENSMUST00000198337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027744	Stoml3	ENSMUST00000029307	ENSMUSP00000029307	TRANSLATION	protein_coding	-	CCDS17347.1	1	287	0	3.35	0.5	104.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000027744	Stoml3	ENSMUST00000124702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028152	Tspan5	ENSMUST00000142890	ENSMUSP00000120969	TRANSLATION	nonsense_mediated_decay	-	-	1	193	0	2.5878	0	115.5	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000142001	ENSMUSP00000117857	TRANSLATION	nonsense_mediated_decay	-	-	3	122	0	1.6028	0	79.8	3	2,-3	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000146356	ENSMUSP00000114663	TRANSLATION	protein_coding	stop	-	3	106	0	1.7528	0	103.9	3	2,-2	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000121826	ENSMUSP00000113359	TRANSLATION	protein_coding	-	-	1	197	0	1.7528	0.5	170.3	4	2,-2	-	-	7.404	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000135629	ENSMUSP00000120961	TRANSLATION	protein_coding	stop	-	3	79	0	1.6028	0	79.8	3	2,-2	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000153336	ENSMUSP00000122120	TRANSLATION	protein_coding	stop	-	3	67	0	1.75	0	66.8	3	2,-3	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000127772	ENSMUSP00000122500	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000119993	ENSMUSP00000113230	TRANSLATION	protein_coding	-	-	1	197	0	1.7528	0.5	170.3	4	2,-2	-	-	7.404	MINOR
ENSMUSG00000028152	Tspan5	ENSMUST00000029800	ENSMUSP00000029800	TRANSLATION	protein_coding	-	CCDS17870.1	1	268	0	2.7378	21.5	210.9	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057777	Mab21l2	ENSMUST00000191695	-	NO_TRANSLATION	processed_pseudogene
ENSMUSG00000057777	Mab21l2	ENSMUST00000077524	ENSMUSP00000076729	TRANSLATION	protein_coding	-	CCDS17447.1	-	359	0	1	21.5	337.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000027820	Mme	ENSMUST00000194150	ENSMUSP00000141544	TRANSLATION	protein_coding	-	CCDS17381.1	1	750	7	19.58	7.5	623	3	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027820	Mme	ENSMUST00000194324	ENSMUSP00000142259	TRANSLATION	protein_coding	stop	-	3	133	0	2	0	58.4	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027820	Mme	ENSMUST00000194836	ENSMUSP00000141452	TRANSLATION	protein_coding	stop	-	3	187	0	3.83	0	107.6	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027820	Mme	ENSMUST00000194134	ENSMUSP00000142205	TRANSLATION	protein_coding	-	CCDS17381.1	1	750	7	19.58	7.5	623	3	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027820	Mme	ENSMUST00000029400	ENSMUSP00000029400	TRANSLATION	protein_coding	-	CCDS17381.1	1	750	7	19.58	7.5	623	3	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000027820	Mme	ENSMUST00000193805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000027820	Mme	ENSMUST00000192002	ENSMUSP00000141483	TRANSLATION	protein_coding	stop	-	3	178	0	3.5	0	106.6	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000027820	Mme	ENSMUST00000191633	ENSMUSP00000141469	TRANSLATION	protein_coding	stop	-	3	130	0	2.5	0	40.8	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000062200	Vmn2r7	ENSMUST00000233255	ENSMUSP00000156563	TRANSLATION	protein_coding	-	-	-	915	0	3.97	0.5	498.1	10	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000062200	Vmn2r7	ENSMUST00000161972	ENSMUSP00000124192	TRANSLATION	protein_coding	-	-	5	915	0	3.97	0.5	498.1	10	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000062200	Vmn2r7	ENSMUST00000050123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062200	Vmn2r7	ENSMUST00000168072	ENSMUSP00000131220	TRANSLATION	protein_coding	-	CCDS50924.1	5	824	0	3.44	0.5	495.9	10	-4,-5	-	-	10.806	MINOR
ENSMUSG00000089911	Mfsd14a	ENSMUST00000138418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089911	Mfsd14a	ENSMUST00000196274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089911	Mfsd14a	ENSMUST00000130631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089911	Mfsd14a	ENSMUST00000150402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089911	Mfsd14a	ENSMUST00000029570	ENSMUSP00000029570	TRANSLATION	protein_coding	-	CCDS17790.1	1	490	0	0	11.8	110.8	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000068696	Gpr88	ENSMUST00000199128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068696	Gpr88	ENSMUST00000090473	ENSMUSP00000087959	TRANSLATION	protein_coding	-	CCDS38610.1	1	384	0	0.56	3.9	55	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068696	Gpr88	ENSMUST00000197759	ENSMUSP00000143586	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096621	Gm5849	ENSMUST00000180151	ENSMUSP00000137232	TRANSLATION	protein_coding	-	-	3	117	15	1.8	0	62.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000027868	Tbx15	ENSMUST00000151606	ENSMUSP00000143417	TRANSLATION	protein_coding	stop	-	3	51	0	1.5	0	62.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027868	Tbx15	ENSMUST00000150756	ENSMUSP00000142358	TRANSLATION	protein_coding	stop	-	3	141	0	3.5	0	192.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000027868	Tbx15	ENSMUST00000029462	ENSMUSP00000029462	TRANSLATION	protein_coding	-	CCDS17673.1	1	602	0	4.85	9.6	261.6	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000014601	Strip1	ENSMUST00000064759	ENSMUSP00000068587	TRANSLATION	protein_coding	-	CCDS51043.1	1	837	0	0	5.3	354.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000014601	Strip1	ENSMUST00000200049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014601	Strip1	ENSMUST00000198424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014601	Strip1	ENSMUST00000197192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014601	Strip1	ENSMUST00000196416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027950	Chrnb2	ENSMUST00000029562	ENSMUSP00000029562	TRANSLATION	protein_coding	-	CCDS17515.1	1	501	0	4.75	3.9	529.6	5	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000027950	Chrnb2	ENSMUST00000199372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000027950	Chrnb2	ENSMUST00000200558	ENSMUSP00000143441	TRANSLATION	protein_coding	-	-	1	727	0	3.95	0	465.2	4	4,-1	-	-	6.534	MINOR
ENSMUSG00000028191	Bcl10	ENSMUST00000029842	ENSMUSP00000029842	TRANSLATION	protein_coding	-	CCDS17897.1	1	233	0	1.5	7.5	63.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028191	Bcl10	ENSMUST00000198122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028191	Bcl10	ENSMUST00000197842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063887	Nlgn1	ENSMUST00000108308	ENSMUSP00000103944	TRANSLATION	protein_coding	-	CCDS50874.1	5	814	9	4.6	6.3	648.6	2	-2,-5	-	-	19.767	MINOR
ENSMUSG00000063887	Nlgn1	ENSMUST00000192774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063887	Nlgn1	ENSMUST00000193603	ENSMUSP00000142200	TRANSLATION	protein_coding	-	CCDS17268.1	1	843	9	4.885	7.8	637	2	-2,-5	-	-	20.304	PRINCIPAL:1
ENSMUSG00000063887	Nlgn1	ENSMUST00000075054	ENSMUSP00000074565	TRANSLATION	protein_coding	-	CCDS17268.1	5	843	9	4.885	7.8	637	2	-2,-5	-	-	20.304	PRINCIPAL:1
ENSMUSG00000063887	Nlgn1	ENSMUST00000191835	ENSMUSP00000142086	TRANSLATION	protein_coding	-	CCDS50874.1	1	814	9	4.6	6.3	648.6	2	-2,-5	-	-	19.767	MINOR
ENSMUSG00000036615	Rfxap	ENSMUST00000044373	ENSMUSP00000040917	TRANSLATION	protein_coding	-	-	1	231	0	2	0.5	197.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036615	Rfxap	ENSMUST00000182084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036615	Rfxap	ENSMUST00000182246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028255	Clca1	ENSMUST00000029919	ENSMUSP00000029919	TRANSLATION	protein_coding	-	CCDS17889.1	1	913	5	0	0.5	498.2	0	4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000028255	Clca1	ENSMUST00000195901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028255	Clca1	ENSMUST00000198832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049288	Lix1l	ENSMUST00000199166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049288	Lix1l	ENSMUST00000062058	ENSMUSP00000057623	TRANSLATION	protein_coding	-	CCDS51004.1	1	337	0	0	7.5	459.7	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000046262	C87977	ENSMUST00000105754	ENSMUSP00000101380	TRANSLATION	protein_coding	-	-	3	175	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046262	C87977	ENSMUST00000132946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046262	C87977	ENSMUST00000105755	ENSMUSP00000101381	TRANSLATION	protein_coding	-	-	5	328	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046262	C87977	ENSMUST00000105753	ENSMUSP00000101379	TRANSLATION	protein_coding	-	-	1	306	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046262	C87977	ENSMUST00000146836	ENSMUSP00000120372	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046262	C87977	ENSMUST00000147855	ENSMUSP00000119895	TRANSLATION	protein_coding	stop	-	5	189	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046262	C87977	ENSMUST00000105757	ENSMUSP00000101383	TRANSLATION	protein_coding	-	CCDS51362.1	1	498	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000041530	Ago1	ENSMUST00000239428	ENSMUSP00000159361	TRANSLATION	protein_coding	-	CCDS18653.1	-	857	20	19.41	15.5	827.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000041530	Ago1	ENSMUST00000127800	ENSMUSP00000135662	TRANSLATION	nonsense_mediated_decay	start	-	1	133	0	2	0	51.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041530	Ago1	ENSMUST00000176315	ENSMUSP00000134871	TRANSLATION	protein_coding	start	-	5	553	20	12	0	593.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041530	Ago1	ENSMUST00000149425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041530	Ago1	ENSMUST00000097888	ENSMUSP00000095498	TRANSLATION	protein_coding	-	CCDS18653.1	1	857	20	19.41	15.5	827.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000041530	Ago1	ENSMUST00000156533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041530	Ago1	ENSMUST00000239399	ENSMUSP00000159364	TRANSLATION	protein_coding	-	-	-	895	20	19.41	3.9	827.6	0	-4,-6	-	-	18.8	MINOR
ENSMUSG00000047945	Marcksl1	ENSMUST00000062356	ENSMUSP00000055637	TRANSLATION	protein_coding	-	CCDS18695.1	1	200	0	0	3.9	77.8	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000028362	Tnfsf8	ENSMUST00000030047	ENSMUSP00000030047	TRANSLATION	protein_coding	-	CCDS18264.1	1	239	0	0	1.5	83.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028621	Cyb5rl	ENSMUST00000126207	ENSMUSP00000116114	TRANSLATION	nonsense_mediated_decay	start	-	1	80	12	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000149453	ENSMUSP00000121581	TRANSLATION	nonsense_mediated_decay	-	-	1	86	12	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000106760	ENSMUSP00000102371	TRANSLATION	protein_coding	-	-	3	167	17	1.63	0	49.7	0	-4,-5	-	-	1.854	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000106756	ENSMUSP00000102367	TRANSLATION	protein_coding	-	CCDS38829.1	1	256	31	4.576	0.5	120.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000156406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028621	Cyb5rl	ENSMUST00000106758	ENSMUSP00000102369	TRANSLATION	protein_coding	-	CCDS84765.1	5	316	43	4.51	1.7	120.6	0	-4,-5	-	-	17.868	PRINCIPAL:1
ENSMUSG00000028621	Cyb5rl	ENSMUST00000030364	ENSMUSP00000030364	TRANSLATION	protein_coding	-	-	1	281	38	3.51	0	86.3	0	-4,-5	-	-	10.476	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000154283	ENSMUSP00000119366	TRANSLATION	protein_coding	stop	-	5	87	12	0.28	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000145324	ENSMUSP00000122502	TRANSLATION	protein_coding	stop	-	5	82	12	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000137269	ENSMUSP00000119249	TRANSLATION	protein_coding	start	-	5	181	21	3.11	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028621	Cyb5rl	ENSMUST00000127916	ENSMUSP00000123206	TRANSLATION	protein_coding	start	-	2	45	3	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037139	Myom3	ENSMUST00000142177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037139	Myom3	ENSMUST00000145304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037139	Myom3	ENSMUST00000105854	ENSMUSP00000101480	TRANSLATION	protein_coding	-	CCDS38921.1	5	1439	0	23.44	3.9	418.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000071019	Sdr16c6	ENSMUST00000108383	ENSMUSP00000104020	TRANSLATION	protein_coding	-	CCDS38688.1	1	316	27	4.6	2.7	151	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000071019	Sdr16c6	ENSMUST00000095151	ENSMUSP00000092773	TRANSLATION	protein_coding	-	CCDS38688.1	5	316	27	4.6	2.7	151	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028439	Fam219a	ENSMUST00000130288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028439	Fam219a	ENSMUST00000108052	ENSMUSP00000103687	TRANSLATION	protein_coding	-	CCDS51141.1	1	168	0	0	7.5	182.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028439	Fam219a	ENSMUST00000146276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028439	Fam219a	ENSMUST00000108049	ENSMUSP00000103684	TRANSLATION	protein_coding	-	CCDS38718.1	1	157	0	0	2.7	182.1	0	-4,-5	-	-	6.786	MINOR
ENSMUSG00000028439	Fam219a	ENSMUST00000108050	ENSMUSP00000103685	TRANSLATION	protein_coding	-	-	5	156	0	0	2.7	176.7	0	-4,-5	-	-	6.462	MINOR
ENSMUSG00000038827	Abitram	ENSMUST00000131520	ENSMUSP00000115102	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038827	Abitram	ENSMUST00000147763	ENSMUSP00000114249	TRANSLATION	nonsense_mediated_decay	start	-	3	98	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038827	Abitram	ENSMUST00000045368	ENSMUSP00000047275	TRANSLATION	protein_coding	-	CCDS38766.1	1	193	0	0	1.5	27.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038827	Abitram	ENSMUST00000152638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035201	B020004J07Rik	ENSMUST00000084386	ENSMUSP00000081421	TRANSLATION	protein_coding	-	CCDS51241.1	1	476	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000035201	B020004J07Rik	ENSMUST00000106919	ENSMUSP00000102532	TRANSLATION	protein_coding	-	CCDS51241.1	1	476	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000040860	Crocc	ENSMUST00000168157	ENSMUSP00000126543	TRANSLATION	protein_coding	-	CCDS51346.1	1	1845	0	0	1.5	146.5	0	-4,-5	-	-	2.286	MINOR
ENSMUSG00000040860	Crocc	ENSMUST00000097816	ENSMUSP00000095425	TRANSLATION	protein_coding	-	CCDS51346.1	5	1845	0	0	1.5	146.5	0	-4,-5	-	-	2.286	MINOR
ENSMUSG00000040860	Crocc	ENSMUST00000122846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040860	Crocc	ENSMUST00000126863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040860	Crocc	ENSMUST00000040222	ENSMUSP00000037679	TRANSLATION	protein_coding	-	CCDS51346.1	5	1845	0	0	1.5	146.5	0	-4,-5	-	-	2.286	MINOR
ENSMUSG00000040860	Crocc	ENSMUST00000151455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040860	Crocc	ENSMUST00000137721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040860	Crocc	ENSMUST00000144196	ENSMUSP00000120555	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040860	Crocc	ENSMUST00000102491	ENSMUSP00000099549	TRANSLATION	protein_coding	-	CCDS18861.1	1	2009	0	0	1.5	208.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000040860	Crocc	ENSMUST00000126973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040860	Crocc	ENSMUST00000124286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078532	Nkain1	ENSMUST00000180498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078532	Nkain1	ENSMUST00000105993	ENSMUSP00000101614	TRANSLATION	protein_coding	-	CCDS57302.1	1	207	0	0	15.3	340.3	4	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000078532	Nkain1	ENSMUST00000180884	ENSMUSP00000138045	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	0	0	165.8	3	2,-3	-	-	-1	MINOR
ENSMUSG00000070687	Htr1d	ENSMUST00000121571	ENSMUSP00000112402	TRANSLATION	protein_coding	-	CCDS18806.1	1	374	0	0.6	9.5	249.7	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000070687	Htr1d	ENSMUST00000117699	ENSMUSP00000112840	TRANSLATION	protein_coding	-	CCDS18806.1	1	374	0	0.6	9.5	249.7	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000070687	Htr1d	ENSMUST00000133818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070687	Htr1d	ENSMUST00000088677	ENSMUSP00000086052	TRANSLATION	protein_coding	-	CCDS18806.1	1	374	0	0.6	9.5	249.7	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000096854	Ifnz	ENSMUST00000105144	ENSMUSP00000100775	TRANSLATION	protein_coding	-	CCDS18333.1	-	182	0	0.48	0.5	96.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028857	Tmem222	ENSMUST00000153059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028857	Tmem222	ENSMUST00000132713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028857	Tmem222	ENSMUST00000139030	ENSMUSP00000121858	TRANSLATION	nonsense_mediated_decay	-	-	3	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028857	Tmem222	ENSMUST00000134781	ENSMUSP00000120532	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	0	0	60.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028857	Tmem222	ENSMUST00000137622	ENSMUSP00000117527	TRANSLATION	nonsense_mediated_decay	start	-	5	101	0	0	0	61.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028857	Tmem222	ENSMUST00000105907	ENSMUSP00000101527	TRANSLATION	protein_coding	-	CCDS51321.1	1	208	0	0	6.3	154.8	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000040128	Pnrc1	ENSMUST00000049357	ENSMUSP00000040377	TRANSLATION	protein_coding	-	CCDS18023.1	1	297	0	0.64	0.5	28	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000040128	Pnrc1	ENSMUST00000137589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040128	Pnrc1	ENSMUST00000155616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028639	Ybx1	ENSMUST00000145976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028639	Ybx1	ENSMUST00000127737	ENSMUSP00000117225	TRANSLATION	protein_coding	start	-	5	214	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028639	Ybx1	ENSMUST00000079644	ENSMUSP00000078589	TRANSLATION	protein_coding	-	CCDS18579.1	1	322	0	2.03	7.6	90.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028639	Ybx1	ENSMUST00000142884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028639	Ybx1	ENSMUST00000152733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028639	Ybx1	ENSMUST00000144992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028639	Ybx1	ENSMUST00000139897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028692	Akr1a1	ENSMUST00000128059	ENSMUSP00000114861	TRANSLATION	protein_coding	stop	-	3	203	10	4.25	0	128.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028692	Akr1a1	ENSMUST00000128010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028692	Akr1a1	ENSMUST00000030455	ENSMUSP00000030455	TRANSLATION	protein_coding	-	CCDS18514.1	1	325	28	7.75	7.5	188.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000028692	Akr1a1	ENSMUST00000126146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028899	Taf12	ENSMUST00000030731	ENSMUSP00000030731	TRANSLATION	protein_coding	-	CCDS18721.1	1	161	0	2.2	14.8	122.9	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000028899	Taf12	ENSMUST00000105963	ENSMUSP00000101583	TRANSLATION	protein_coding	-	-	5	213	0	2.2	12.3	122.9	0	-4,-5	-	-	15.276	ALTERNATIVE:1
ENSMUSG00000028899	Taf12	ENSMUST00000124365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067261	Foxd3	ENSMUST00000087285	ENSMUSP00000084541	TRANSLATION	protein_coding	-	CCDS18383.1	-	469	0	0.6	0.5	130.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045854	Lyrm2	ENSMUST00000135833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045854	Lyrm2	ENSMUST00000062802	ENSMUSP00000061451	TRANSLATION	protein_coding	-	CCDS38703.1	1	88	0	0	19.5	65.7	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000045854	Lyrm2	ENSMUST00000130321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078507	Aadacl3	ENSMUST00000105749	ENSMUSP00000101375	TRANSLATION	protein_coding	-	CCDS38954.1	5	408	3	1.45	0.5	0	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000054428	Atpif1	ENSMUST00000145795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054428	Atpif1	ENSMUST00000152993	ENSMUSP00000133099	TRANSLATION	protein_coding	-	-	2	74	0	1.75	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000054428	Atpif1	ENSMUST00000067496	ENSMUSP00000064282	TRANSLATION	protein_coding	-	CCDS18727.1	1	106	0	1.75	5.1	0	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000039196	Orm1	ENSMUST00000030044	ENSMUSP00000030044	TRANSLATION	protein_coding	-	CCDS18251.1	1	207	0	4.45	0.5	68.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000041025	Iffo2	ENSMUST00000040023	ENSMUSP00000039533	TRANSLATION	protein_coding	-	CCDS18847.1	5	287	0	1.8	1.5	42.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041025	Iffo2	ENSMUST00000174078	ENSMUSP00000134062	TRANSLATION	protein_coding	-	CCDS57308.1	1	512	0	1.8	1.7	42.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000041025	Iffo2	ENSMUST00000123827	ENSMUSP00000133384	TRANSLATION	protein_coding	-	CCDS18847.1	1	287	0	1.8	1.5	42.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028589	1700012P22Rik	ENSMUST00000030323	ENSMUSP00000030323	TRANSLATION	protein_coding	-	CCDS51365.1	1	196	0	0	5.1	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000078513	Gm13088	ENSMUST00000105771	ENSMUSP00000101397	TRANSLATION	protein_coding	-	CCDS51356.1	5	460	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000041216	Clvs1	ENSMUST00000135864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041216	Clvs1	ENSMUST00000108348	ENSMUSP00000103985	TRANSLATION	protein_coding	-	CCDS17957.1	1	354	0	2.82	7.5	146.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041216	Clvs1	ENSMUST00000128117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041216	Clvs1	ENSMUST00000038841	ENSMUSP00000035649	TRANSLATION	protein_coding	-	CCDS17957.1	1	354	0	2.82	7.5	146.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041216	Clvs1	ENSMUST00000142369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041216	Clvs1	ENSMUST00000141734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041216	Clvs1	ENSMUST00000141085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041216	Clvs1	ENSMUST00000147285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078234	Klhdc7a	ENSMUST00000105031	ENSMUSP00000100648	TRANSLATION	protein_coding	-	CCDS38935.1	-	773	0	0	0.5	55.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028337	Coro2a	ENSMUST00000107756	ENSMUSP00000103385	TRANSLATION	protein_coding	-	CCDS18154.1	1	524	0	8.06	1.5	217.6	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000028337	Coro2a	ENSMUST00000107757	ENSMUSP00000103386	TRANSLATION	protein_coding	-	CCDS71383.1	1	543	0	8.06	1.5	217.6	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028337	Coro2a	ENSMUST00000129121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028337	Coro2a	ENSMUST00000127304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028337	Coro2a	ENSMUST00000135062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028337	Coro2a	ENSMUST00000030021	ENSMUSP00000030021	TRANSLATION	protein_coding	-	CCDS18154.1	1	524	0	8.06	1.5	217.6	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000028337	Coro2a	ENSMUST00000139179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066072	Cyp4a10	ENSMUST00000058785	ENSMUSP00000061126	TRANSLATION	protein_coding	-	CCDS18492.1	1	509	30	9.83	1.5	441.1	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000066072	Cyp4a10	ENSMUST00000094886	ENSMUSP00000092486	TRANSLATION	protein_coding	-	-	2	499	30	9.5	0	424.5	1	-3,-5	-	-	16.344	MINOR
ENSMUSG00000065999	Zfp985	ENSMUST00000081742	ENSMUSP00000080438	TRANSLATION	protein_coding	-	CCDS18921.1	1	519	40	1.6	0.5	279.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000065999	Zfp985	ENSMUST00000139784	ENSMUSP00000123296	TRANSLATION	protein_coding	stop	-	2	150	0	1	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000065999	Zfp985	ENSMUST00000143885	ENSMUSP00000121177	TRANSLATION	protein_coding	stop	-	3	88	0	1	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028849	Map7d1	ENSMUST00000125981	ENSMUSP00000120292	TRANSLATION	protein_coding	start	-	1	591	0	0	0	130.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028849	Map7d1	ENSMUST00000061143	ENSMUSP00000054338	TRANSLATION	protein_coding	-	CCDS18646.1	1	846	0	0	0.5	130.6	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000028849	Map7d1	ENSMUST00000137382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028849	Map7d1	ENSMUST00000106132	ENSMUSP00000101738	TRANSLATION	protein_coding	-	CCDS51302.1	2	774	0	0	0.5	130.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000028849	Map7d1	ENSMUST00000122129	ENSMUSP00000113250	TRANSLATION	protein_coding	-	CCDS84793.1	5	814	0	0	0.5	130.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000028849	Map7d1	ENSMUST00000131579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096530	Gm11758	ENSMUST00000107326	ENSMUSP00000102948	TRANSLATION	protein_coding	-	-	5	232	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000096530	Gm11758	ENSMUST00000107327	ENSMUSP00000102949	TRANSLATION	protein_coding	-	CCDS51207.2	1	360	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000035601	Trmt10b	ENSMUST00000107800	ENSMUSP00000103429	TRANSLATION	protein_coding	-	-	5	316	15	3.93	2.7	152.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000035601	Trmt10b	ENSMUST00000044673	ENSMUSP00000041052	TRANSLATION	protein_coding	-	CCDS18135.1	1	318	15	3.93	2.7	152.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035601	Trmt10b	ENSMUST00000126972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035601	Trmt10b	ENSMUST00000145756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035601	Trmt10b	ENSMUST00000141659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035601	Trmt10b	ENSMUST00000144781	ENSMUSP00000114832	TRANSLATION	protein_coding	stop	-	3	141	0	0.82	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035601	Trmt10b	ENSMUST00000142785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028587	Orc1	ENSMUST00000130162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028587	Orc1	ENSMUST00000102744	ENSMUSP00000099805	TRANSLATION	protein_coding	-	CCDS18453.1	1	840	16	12.55	0.5	166.6	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028587	Orc1	ENSMUST00000143497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028587	Orc1	ENSMUST00000129931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028587	Orc1	ENSMUST00000139772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073878	Gm13304	ENSMUST00000098123	ENSMUSP00000095727	TRANSLATION	protein_coding	-	CCDS51148.1	1	133	0	2.33	3.9	83.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000038422	Hdhd3	ENSMUST00000140038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038422	Hdhd3	ENSMUST00000037820	ENSMUSP00000036337	TRANSLATION	protein_coding	-	CCDS18242.1	1	251	0	1	5.1	50.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028556	Dock7	ENSMUST00000140225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028556	Dock7	ENSMUST00000205783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028556	Dock7	ENSMUST00000205652	ENSMUSP00000145833	TRANSLATION	nonsense_mediated_decay	start	-	5	102	0	1.3	0	61.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028556	Dock7	ENSMUST00000206128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028556	Dock7	ENSMUST00000206604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028556	Dock7	ENSMUST00000205650	ENSMUSP00000145604	TRANSLATION	protein_coding	-	CCDS38816.1	5	2098	0	8.58	8.1	997.1	0	-4,-2	-	-	14.505	PRINCIPAL:3
ENSMUSG00000028556	Dock7	ENSMUST00000075836	ENSMUSP00000075233	TRANSLATION	protein_coding	-	-	5	2100	0	8.58	8.1	999.2	0	-4,-2	-	-	14.631	ALTERNATIVE:1
ENSMUSG00000028556	Dock7	ENSMUST00000127417	ENSMUSP00000117797	TRANSLATION	protein_coding	-	-	5	2130	0	8.58	9.1	999.2	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000028556	Dock7	ENSMUST00000124040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028556	Dock7	ENSMUST00000140848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028556	Dock7	ENSMUST00000131386	ENSMUSP00000145985	TRANSLATION	nonsense_mediated_decay	start	-	5	46	0	0	0	36.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028556	Dock7	ENSMUST00000150254	ENSMUSP00000114204	TRANSLATION	protein_coding	start/stop	-	3	255	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028556	Dock7	ENSMUST00000124466	ENSMUSP00000145749	TRANSLATION	nonsense_mediated_decay	start	-	5	811	0	0	0	142	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028556	Dock7	ENSMUST00000139152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028556	Dock7	ENSMUST00000153362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028556	Dock7	ENSMUST00000205484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028556	Dock7	ENSMUST00000127946	ENSMUSP00000119103	TRANSLATION	protein_coding	start/stop	-	5	247	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028556	Dock7	ENSMUST00000030286	ENSMUSP00000030286	TRANSLATION	protein_coding	-	CCDS71425.1	5	2128	0	8.58	8.9	997.1	0	-4,-2	-	-	14.799	ALTERNATIVE:1
ENSMUSG00000070737	Tmem35b	ENSMUST00000106097	ENSMUSP00000101703	TRANSLATION	protein_coding	-	-	2	137	0	0	0	0	5	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000070737	Tmem35b	ENSMUST00000094712	ENSMUSP00000092302	TRANSLATION	protein_coding	-	CCDS38882.1	1	150	0	0	1.5	0	5	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000028385	Snx30	ENSMUST00000123665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028385	Snx30	ENSMUST00000030080	ENSMUSP00000030080	TRANSLATION	protein_coding	-	CCDS18226.1	1	437	0	3.795	6.3	112	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000028385	Snx30	ENSMUST00000143185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028385	Snx30	ENSMUST00000145199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089945	Pakap	ENSMUST00000126465	ENSMUSP00000130230	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	139	0	0	0	71.8	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000089945	Pakap	ENSMUST00000098066	ENSMUSP00000095674	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	139	0	0	0	71.8	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000089945	Pakap	ENSMUST00000150412	ENSMUSP00000117466	TRANSLATION	protein_coding,RT	start	-	5	1137	0	0	0	125.5	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000070990	Foxe1	ENSMUST00000095097	ENSMUSP00000092715	TRANSLATION	protein_coding	-	CCDS18147.1	-	371	0	0.4	0.5	126.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095218	Olfr1338	ENSMUST00000216559	ENSMUSP00000149843	TRANSLATION	protein_coding	-	-	5	315	0	0.42	4	184	7	-3,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000095218	Olfr1338	ENSMUST00000214922	ENSMUSP00000149448	TRANSLATION	protein_coding	-	-	5	315	0	0.42	4	184	7	-3,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000095218	Olfr1338	ENSMUST00000084315	ENSMUSP00000092427	TRANSLATION	protein_coding	-	CCDS38856.1	-	313	0	0.42	4	184	7	-3,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000042677	Zc3h12a	ENSMUST00000131685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042677	Zc3h12a	ENSMUST00000036188	ENSMUSP00000037172	TRANSLATION	protein_coding	-	CCDS18638.1	1	596	4	4.2	1.5	214.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034171	Faah	ENSMUST00000150668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034171	Faah	ENSMUST00000156126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034171	Faah	ENSMUST00000125761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034171	Faah	ENSMUST00000133225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034171	Faah	ENSMUST00000154249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034171	Faah	ENSMUST00000143724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034171	Faah	ENSMUST00000049095	ENSMUSP00000041543	TRANSLATION	protein_coding	-	CCDS18501.1	1	579	7	13.5	5.1	404.9	0	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000034171	Faah	ENSMUST00000150614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028751	Pla2g2e	ENSMUST00000105803	ENSMUSP00000101429	TRANSLATION	protein_coding	-	-	5	80	0	0	0	0	0	-2,1	-	-	0	MINOR
ENSMUSG00000028751	Pla2g2e	ENSMUST00000030531	ENSMUSP00000030531	TRANSLATION	protein_coding	-	CCDS18835.1	1	142	5	4.25	2.9	132.4	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000028751	Pla2g2e	ENSMUST00000105804	ENSMUSP00000101430	TRANSLATION	protein_coding	-	CCDS18835.1	1	142	5	4.25	2.9	132.4	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000061455	Stx17	ENSMUST00000064765	ENSMUSP00000068087	TRANSLATION	protein_coding	-	CCDS18164.1	5	301	0	2.25	7.5	0	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000061455	Stx17	ENSMUST00000107720	ENSMUSP00000103348	TRANSLATION	protein_coding	-	CCDS18164.1	1	301	0	2.25	7.5	0	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000061455	Stx17	ENSMUST00000107721	ENSMUSP00000103349	TRANSLATION	protein_coding	-	-	1	276	0	2.25	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000061455	Stx17	ENSMUST00000153502	ENSMUSP00000117512	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042616	Oscp1	ENSMUST00000143712	ENSMUSP00000152196	TRANSLATION	protein_coding	-	-	1	389	0	0	7.3	260.8	0	-4,-5	-	-	7.563	MINOR
ENSMUSG00000042616	Oscp1	ENSMUST00000129968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042616	Oscp1	ENSMUST00000153138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042616	Oscp1	ENSMUST00000035497	ENSMUSP00000045241	TRANSLATION	protein_coding	-	CCDS38879.1	1	379	0	0	10.3	268.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000032998	Foxj3	ENSMUST00000131413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032998	Foxj3	ENSMUST00000106310	ENSMUSP00000101917	TRANSLATION	protein_coding	-	CCDS71462.1	1	589	0	2.7	6.4	132	0	-4,-6	-	-	14.454	ALTERNATIVE:1
ENSMUSG00000032998	Foxj3	ENSMUST00000138845	ENSMUSP00000124806	TRANSLATION	protein_coding	-	-	1	155	0	2.25	0	119.8	0	-4,-6	-	-	10.266	MINOR
ENSMUSG00000032998	Foxj3	ENSMUST00000162267	ENSMUSP00000123815	TRANSLATION	protein_coding	-	-	1	155	0	2.25	0	119.8	0	-4,-6	-	-	10.266	MINOR
ENSMUSG00000032998	Foxj3	ENSMUST00000160219	ENSMUSP00000123923	TRANSLATION	protein_coding	stop	-	3	104	0	1	0	34	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032998	Foxj3	ENSMUST00000137560	ENSMUSP00000123826	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032998	Foxj3	ENSMUST00000133097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032998	Foxj3	ENSMUST00000176012	ENSMUSP00000135430	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032998	Foxj3	ENSMUST00000044564	ENSMUSP00000035746	TRANSLATION	protein_coding	-	CCDS18585.1	1	623	0	2.7	7.6	132	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000032998	Foxj3	ENSMUST00000161196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028635	Edn2	ENSMUST00000030384	ENSMUSP00000030384	TRANSLATION	protein_coding	-	CCDS38864.1	1	175	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000028841	Cnksr1	ENSMUST00000144504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028841	Cnksr1	ENSMUST00000146283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028841	Cnksr1	ENSMUST00000124181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028841	Cnksr1	ENSMUST00000030645	ENSMUSP00000030645	TRANSLATION	protein_coding	-	CCDS38912.1	1	700	0	4.05	0.5	134.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028841	Cnksr1	ENSMUST00000145998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078575	Gm12887	ENSMUST00000106265	ENSMUSP00000101872	TRANSLATION	protein_coding	-	CCDS38868.1	5	119	0	1.1	0.5	28.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000023247	Guca2a	ENSMUST00000024015	ENSMUSP00000024015	TRANSLATION	protein_coding	-	CCDS18586.1	1	116	0	2.05	1.5	116.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000069733	Ube2u	ENSMUST00000133493	ENSMUSP00000137472	TRANSLATION	protein_coding	-	CCDS18390.2	1	352	0	4.58	0.5	96.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069733	Ube2u	ENSMUST00000092730	ENSMUSP00000090406	TRANSLATION	protein_coding	-	-	1	239	0	1.08	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000071001	Hrct1	ENSMUST00000095109	ENSMUSP00000092727	TRANSLATION	protein_coding	-	CCDS51169.1	-	109	0	0	0.5	56.1	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073888	Ccl27a	ENSMUST00000138337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000133556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000108033	ENSMUSP00000103668	TRANSLATION	protein_coding	-	-	1	119	0	2	1.5	30.8	0	3,-2	-	-	12.188	ALTERNATIVE:2
ENSMUSG00000073888	Ccl27a	ENSMUST00000173865	ENSMUSP00000133827	TRANSLATION	protein_coding	-	CCDS51144.1	1	87	0	0	6.3	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000144090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000151909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000155240	ENSMUSP00000154105	TRANSLATION	protein_coding	-	CCDS51144.1	2	87	0	0	6.3	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000136768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000074387	ENSMUSP00000073990	TRANSLATION	protein_coding	-	CCDS18072.1	1	120	0	2	1.5	30.8	0	3,-2	-	-	12.188	PRINCIPAL:3
ENSMUSG00000073888	Ccl27a	ENSMUST00000131349	ENSMUSP00000154160	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000143676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000155322	ENSMUSP00000153974	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000151142	ENSMUSP00000154658	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000133572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000108036	ENSMUSP00000103671	TRANSLATION	protein_coding	-	CCDS38721.1	2	164	0	2	1.5	30.8	0	-4,-5	-	-	12.188	ALTERNATIVE:2
ENSMUSG00000073888	Ccl27a	ENSMUST00000108035	ENSMUSP00000103670	TRANSLATION	protein_coding	-	CCDS84714.1	1	127	0	2	0.5	30.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000073888	Ccl27a	ENSMUST00000126759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073888	Ccl27a	ENSMUST00000108032	ENSMUSP00000103667	TRANSLATION	protein_coding	-	CCDS51144.1	1	87	0	0	6.3	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000073888	Ccl27a	ENSMUST00000108037	ENSMUSP00000103672	TRANSLATION	protein_coding	-	CCDS38721.1	2	164	0	2	1.5	30.8	0	-4,-5	-	-	12.188	ALTERNATIVE:2
ENSMUSG00000028488	Sh3gl2	ENSMUST00000133109	ENSMUSP00000117573	TRANSLATION	protein_coding	start	-	3	231	0	4.6	0	183.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028488	Sh3gl2	ENSMUST00000107189	ENSMUSP00000102807	TRANSLATION	protein_coding	-	-	1	245	0	6	0	272.1	0	-4,-6	-	-	3.978	MINOR
ENSMUSG00000028488	Sh3gl2	ENSMUST00000030212	ENSMUSP00000030212	TRANSLATION	protein_coding	-	CCDS18303.1	1	352	0	8.43	11.6	324.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028488	Sh3gl2	ENSMUST00000107184	ENSMUSP00000102802	TRANSLATION	protein_coding	-	-	2	182	0	4.09	0	163.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028488	Sh3gl2	ENSMUST00000107188	ENSMUSP00000102806	TRANSLATION	protein_coding	-	-	1	431	0	7.68	0	301.9	0	-4,-6	-	-	9.126	MINOR
ENSMUSG00000066107	Gm12666	ENSMUST00000123179	ENSMUSP00000122212	TRANSLATION	protein_coding	start/stop	-	5	254	0	2	0	57.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000078509	Pramef17	ENSMUST00000105762	ENSMUSP00000101388	TRANSLATION	protein_coding	-	CCDS38951.1	5	475	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000010517	Faf1	ENSMUST00000102724	ENSMUSP00000099785	TRANSLATION	protein_coding	-	CCDS18468.1	1	649	0	11.15	12.3	109.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000010517	Faf1	ENSMUST00000155204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010517	Faf1	ENSMUST00000143217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033770	Clcnka	ENSMUST00000042617	ENSMUSP00000048520	TRANSLATION	protein_coding	-	CCDS18871.1	1	687	0	16.1	5.1	278.7	10	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033770	Clcnka	ENSMUST00000105790	ENSMUSP00000101416	TRANSLATION	protein_coding	-	CCDS18871.1	1	687	0	16.1	5.1	278.7	10	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033770	Clcnka	ENSMUST00000150334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033770	Clcnka	ENSMUST00000133676	ENSMUSP00000122396	TRANSLATION	protein_coding	stop	-	5	192	0	4.35	0	43.3	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000078626	Gm12790	ENSMUST00000106916	ENSMUSP00000102529	TRANSLATION	protein_coding	-	-	5	201	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000095101	Gm13285	ENSMUST00000179725	ENSMUSP00000137222	TRANSLATION	protein_coding	-	CCDS51227.1	-	182	0	0.48	0.5	94.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028910	Mecr	ENSMUST00000128116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000128607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000127735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000143067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000030742	ENSMUSP00000030742	TRANSLATION	protein_coding	-	CCDS18715.1	1	373	23	9.05	1.5	62	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028910	Mecr	ENSMUST00000139573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000137321	ENSMUSP00000114543	TRANSLATION	protein_coding	stop	-	5	251	11	4.8	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028910	Mecr	ENSMUST00000137412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000145045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028910	Mecr	ENSMUST00000142386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049649	Gpr3	ENSMUST00000052090	ENSMUSP00000062083	TRANSLATION	protein_coding	-	CCDS18743.1	1	330	0	1.02	7.5	115.4	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049649	Gpr3	ENSMUST00000151025	ENSMUSP00000116032	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000049649	Gpr3	ENSMUST00000105911	ENSMUSP00000101531	TRANSLATION	protein_coding	-	CCDS18743.1	-	330	0	1.02	7.5	115.4	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000006218	Fam131c	ENSMUST00000006380	ENSMUSP00000006380	TRANSLATION	protein_coding	-	CCDS38938.1	1	273	0	0	1.5	151.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078588	Ccdc24	ENSMUST00000171052	ENSMUSP00000129502	TRANSLATION	protein_coding	-	-	5	296	0	0	0	214.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078588	Ccdc24	ENSMUST00000166325	ENSMUSP00000131493	TRANSLATION	protein_coding	stop	-	3	187	0	0	0	182.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078588	Ccdc24	ENSMUST00000131938	ENSMUSP00000131215	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078588	Ccdc24	ENSMUST00000164853	ENSMUSP00000132114	TRANSLATION	protein_coding,RT	-	CCDS51281.1	2	268	0	0	0.5	172.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078588	Ccdc24	ENSMUST00000106422	ENSMUSP00000102030	TRANSLATION	protein_coding	-	CCDS51281.1	1	268	0	0	0.5	172.8	0	-4,-5	-	-	3.522	MINOR
ENSMUSG00000078588	Ccdc24	ENSMUST00000167287	ENSMUSP00000126161	TRANSLATION	protein_coding	start	-	3	91	0	0	0	67.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078588	Ccdc24	ENSMUST00000163974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078588	Ccdc24	ENSMUST00000154439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078588	Ccdc24	ENSMUST00000130758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070577	Gm572	ENSMUST00000105698	ENSMUSP00000101323	TRANSLATION	protein_coding	-	CCDS51378.1	5	399	0	0	0.5	376.2	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041000	Trim62	ENSMUST00000035667	ENSMUSP00000039121	TRANSLATION	protein_coding	-	CCDS18677.1	1	475	16	2.72	9.6	181.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000041000	Trim62	ENSMUST00000147852	ENSMUSP00000123646	TRANSLATION	nonsense_mediated_decay	-	-	1	145	16	0.798	0	68.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047671	Tctex1d4	ENSMUST00000134074	ENSMUSP00000114182	TRANSLATION	protein_coding	stop	-	3	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047671	Tctex1d4	ENSMUST00000144269	ENSMUSP00000122605	TRANSLATION	protein_coding	stop	-	3	178	0	0.4	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047671	Tctex1d4	ENSMUST00000062206	ENSMUSP00000052243	TRANSLATION	protein_coding	-	CCDS18528.1	1	219	0	1	3.9	78.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046862	Pramef8	ENSMUST00000037356	ENSMUSP00000041323	TRANSLATION	protein_coding	-	CCDS38944.1	1	480	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000046862	Pramef8	ENSMUST00000155157	ENSMUSP00000117878	TRANSLATION	protein_coding	stop	-	2	194	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046862	Pramef8	ENSMUST00000126398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046862	Pramef8	ENSMUST00000059790	ENSMUSP00000058676	TRANSLATION	protein_coding	-	CCDS38944.1	1	480	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000046862	Pramef8	ENSMUST00000132915	ENSMUSP00000122707	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028782	Adgrb2	ENSMUST00000030571	ENSMUSP00000030571	TRANSLATION	protein_coding	-	-	5	1577	6	12.545	0	560.4	12	3,-2	-	-	17.88	ALTERNATIVE:2
ENSMUSG00000028782	Adgrb2	ENSMUST00000166118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000136787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000106012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000121049	ENSMUSP00000112869	TRANSLATION	protein_coding	-	CCDS57300.1	1	1506	6	11.845	1.5	514.8	12	3,-2	-	-	13.746	MINOR
ENSMUSG00000028782	Adgrb2	ENSMUST00000097868	ENSMUSP00000095480	TRANSLATION	protein_coding	-	-	5	1544	6	12.345	0	562.4	12	3,-2	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000028782	Adgrb2	ENSMUST00000106017	ENSMUSP00000101638	TRANSLATION	protein_coding	-	CCDS51309.1	1	1549	6	12.345	0.5	559.4	12	3,-2	-	-	17.418	PRINCIPAL:3
ENSMUSG00000028782	Adgrb2	ENSMUST00000163625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000149282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000120204	ENSMUSP00000112524	TRANSLATION	protein_coding	-	CCDS71478.1	1	1473	6	11.545	1.5	520	12	3,-2	-	-	13.458	MINOR
ENSMUSG00000028782	Adgrb2	ENSMUST00000106018	ENSMUSP00000101639	TRANSLATION	protein_coding	-	-	5	1489	6	11.645	0	516.8	12	3,-2	-	-	13.464	MINOR
ENSMUSG00000028782	Adgrb2	ENSMUST00000136416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028782	Adgrb2	ENSMUST00000106015	ENSMUSP00000101636	TRANSLATION	protein_coding	-	CCDS80164.1	1	1561	6	12.545	1.5	560.4	12	3,-2	-	-	17.88	ALTERNATIVE:2
ENSMUSG00000028696	Ipp	ENSMUST00000030461	ENSMUSP00000030461	TRANSLATION	protein_coding	-	CCDS38851.1	5	584	0	5.7	8.8	484.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028696	Ipp	ENSMUST00000106479	ENSMUSP00000102088	TRANSLATION	protein_coding	-	CCDS38851.1	1	584	0	5.7	8.8	484.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096688	Mup17	ENSMUST00000107484	ENSMUSP00000103108	TRANSLATION	protein_coding	-	CCDS51198.1	2	180	0	5.08	0.5	109.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000060317	Acnat2	ENSMUST00000139564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060317	Acnat2	ENSMUST00000081541	ENSMUSP00000080256	TRANSLATION	protein_coding	-	CCDS18171.1	1	420	3	3.6	0.5	400.1	0	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000060317	Acnat2	ENSMUST00000125123	ENSMUSP00000119135	TRANSLATION	protein_coding	stop	-	3	204	0	2.3	0	142.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060317	Acnat2	ENSMUST00000107698	ENSMUSP00000103326	TRANSLATION	protein_coding	-	-	1	402	3	3.1	0	400.1	0	-4,-6	-	-	13.998	ALTERNATIVE:2
ENSMUSG00000028661	Epha8	ENSMUST00000030420	ENSMUSP00000030420	TRANSLATION	protein_coding	-	CCDS18813.1	1	1004	19	12.19	3	725.1	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000043753	Dmrta1	ENSMUST00000131576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043753	Dmrta1	ENSMUST00000052478	ENSMUSP00000057488	TRANSLATION	protein_coding	-	CCDS18352.1	1	490	8	0.6	1.5	144.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029056	Pank4	ENSMUST00000105632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029056	Pank4	ENSMUST00000070953	ENSMUSP00000064330	TRANSLATION	protein_coding	-	CCDS84834.1	1	820	34	10.395	0.5	641.7	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000029056	Pank4	ENSMUST00000030931	ENSMUSP00000030931	TRANSLATION	protein_coding	-	CCDS19019.1	1	773	34	10.895	5.2	640	0	-4,-5	-	-	19.898	PRINCIPAL:1
ENSMUSG00000029056	Pank4	ENSMUST00000129386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029056	Pank4	ENSMUST00000148299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029056	Pank4	ENSMUST00000128297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029056	Pank4	ENSMUST00000148934	ENSMUSP00000125663	TRANSLATION	nonsense_mediated_decay	start	-	1	473	26	7.17	0	433.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028772	Zcchc17	ENSMUST00000129840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028772	Zcchc17	ENSMUST00000167964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028772	Zcchc17	ENSMUST00000134159	ENSMUSP00000120807	TRANSLATION	protein_coding	-	CCDS38891.1	1	241	4	3.5	0.5	40	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028772	Zcchc17	ENSMUST00000141615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028772	Zcchc17	ENSMUST00000149755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001089	Luzp1	ENSMUST00000001116	ENSMUSP00000001116	TRANSLATION	protein_coding	-	CCDS38923.1	1	1068	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001089	Luzp1	ENSMUST00000063021	ENSMUSP00000060619	TRANSLATION	protein_coding	-	CCDS38923.1	1	1068	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001089	Luzp1	ENSMUST00000170102	ENSMUSP00000130758	TRANSLATION	protein_coding	-	CCDS38923.1	5	1068	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001089	Luzp1	ENSMUST00000142248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001089	Luzp1	ENSMUST00000105849	ENSMUSP00000101475	TRANSLATION	protein_coding	-	CCDS38923.1	5	1068	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001089	Luzp1	ENSMUST00000129230	ENSMUSP00000128591	TRANSLATION	protein_coding	stop	-	5	66	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001089	Luzp1	ENSMUST00000168936	ENSMUSP00000132089	TRANSLATION	protein_coding	start	-	2	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028776	Tinagl1	ENSMUST00000145774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028776	Tinagl1	ENSMUST00000175822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028776	Tinagl1	ENSMUST00000105999	ENSMUSP00000101621	TRANSLATION	protein_coding	-	CCDS18708.2	1	466	3	5.778	1.5	178.2	0	1,-3	-	-	15	PRINCIPAL:2
ENSMUSG00000028776	Tinagl1	ENSMUST00000132545	ENSMUSP00000135453	TRANSLATION	protein_coding	stop	-	2	161	0	0.4	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028776	Tinagl1	ENSMUST00000030560	ENSMUSP00000030560	TRANSLATION	nonsense_mediated_decay	-	-	1	466	3	5.778	1.5	178.2	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028776	Tinagl1	ENSMUST00000133660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028776	Tinagl1	ENSMUST00000145000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028776	Tinagl1	ENSMUST00000105998	ENSMUSP00000101620	TRANSLATION	protein_coding	-	CCDS18708.2	1	466	3	5.778	1.5	178.2	0	1,-3	-	-	15	PRINCIPAL:2
ENSMUSG00000028776	Tinagl1	ENSMUST00000175992	ENSMUSP00000134900	TRANSLATION	protein_coding	-	-	5	435	3	5.378	0	178.2	0	1,-3	-	-	14.202	ALTERNATIVE:2
ENSMUSG00000032890	Rims3	ENSMUST00000132895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032890	Rims3	ENSMUST00000106283	ENSMUSP00000101890	TRANSLATION	protein_coding	-	CCDS18595.1	5	307	0	4	7.5	56.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032890	Rims3	ENSMUST00000171363	ENSMUSP00000130295	TRANSLATION	protein_coding	-	CCDS18595.1	1	307	0	4	7.5	56.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032890	Rims3	ENSMUST00000071093	ENSMUSP00000068178	TRANSLATION	protein_coding	-	CCDS18595.1	1	307	0	4	7.5	56.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028820	Sfpq	ENSMUST00000146285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028820	Sfpq	ENSMUST00000144630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028820	Sfpq	ENSMUST00000125453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028820	Sfpq	ENSMUST00000143168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028820	Sfpq	ENSMUST00000140682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028820	Sfpq	ENSMUST00000030623	ENSMUSP00000030623	TRANSLATION	protein_coding	-	CCDS18662.1	1	699	0	5.75	1.5	198.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028236	Sdr16c5	ENSMUST00000040925	ENSMUSP00000046298	TRANSLATION	protein_coding	-	CCDS17944.1	1	309	27	4.84	3.9	157.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028236	Sdr16c5	ENSMUST00000126274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028560	Usp1	ENSMUST00000030289	ENSMUSP00000030289	TRANSLATION	protein_coding	-	CCDS18381.1	1	784	8	3.07	5.1	130.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028560	Usp1	ENSMUST00000125104	ENSMUSP00000135496	TRANSLATION	protein_coding	stop	-	2	150	2	1.85	0	49.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028560	Usp1	ENSMUST00000091358	ENSMUSP00000088917	TRANSLATION	protein_coding	-	CCDS18381.1	1	784	8	3.07	5.1	130.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028560	Usp1	ENSMUST00000169053	ENSMUSP00000130307	TRANSLATION	protein_coding	stop	-	5	15	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000111259	Olfr1328	ENSMUST00000215312	ENSMUSP00000149039	TRANSLATION	protein_coding	-	-	5	315	0	0.36	4	179	7	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000111259	Olfr1328	ENSMUST00000081960	ENSMUSP00000080626	TRANSLATION	protein_coding	-	CCDS51287.1	-	313	0	0.36	4	179	7	-3,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000070980	Actl7b	ENSMUST00000095080	ENSMUSP00000092693	TRANSLATION	protein_coding	-	CCDS18196.1	-	418	22	1	2.7	332.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070877	Ldlrad1	ENSMUST00000094916	ENSMUSP00000092521	TRANSLATION	protein_coding	-	CCDS38830.1	5	218	8	1.28	0.5	29.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000061322	Dnaic1	ENSMUST00000119127	ENSMUSP00000113929	TRANSLATION	protein_coding	-	-	1	95	0	0.3	0	0	0	-4,-5	-	-	0.606	MINOR
ENSMUSG00000061322	Dnaic1	ENSMUST00000143198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061322	Dnaic1	ENSMUST00000102963	ENSMUSP00000100028	TRANSLATION	protein_coding	-	CCDS18066.1	1	701	0	2.98	0.5	17.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028459	Cd72	ENSMUST00000107926	ENSMUSP00000103559	TRANSLATION	protein_coding	-	CCDS38740.1	1	354	0	3.08	0.5	0	3	-4,-5	-	-	5.604	PRINCIPAL:3
ENSMUSG00000028459	Cd72	ENSMUST00000140284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028459	Cd72	ENSMUST00000107925	ENSMUSP00000103558	TRANSLATION	protein_coding	-	-	1	347	0	2.75	0	0	3	-4,-5	-	-	4.944	ALTERNATIVE:2
ENSMUSG00000028459	Cd72	ENSMUST00000133110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028459	Cd72	ENSMUST00000030179	ENSMUSP00000030179	TRANSLATION	protein_coding	-	CCDS51166.1	1	361	0	3.278	0.5	0	3	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028459	Cd72	ENSMUST00000134850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028459	Cd72	ENSMUST00000141198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028459	Cd72	ENSMUST00000098104	ENSMUSP00000095708	TRANSLATION	protein_coding	-	CCDS51164.1	1	300	0	3.08	0.5	0	0	-4,-5	-	-	5.604	ALTERNATIVE:2
ENSMUSG00000028459	Cd72	ENSMUST00000151868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028459	Cd72	ENSMUST00000098105	ENSMUSP00000095709	TRANSLATION	protein_coding	-	CCDS51165.1	1	337	0	3.278	0.5	0	3	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000073680	Tmem88b	ENSMUST00000097742	ENSMUSP00000095349	TRANSLATION	protein_coding	-	CCDS19040.1	1	173	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028790	Khdrbs1	ENSMUST00000129342	ENSMUSP00000115402	TRANSLATION	nonsense_mediated_decay	-	-	1	443	0	6.1	6.3	206.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028790	Khdrbs1	ENSMUST00000066257	ENSMUSP00000066516	TRANSLATION	protein_coding	-	CCDS18703.1	1	443	0	6.1	6.3	206.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028790	Khdrbs1	ENSMUST00000139281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028790	Khdrbs1	ENSMUST00000139936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028687	Mutyh	ENSMUST00000124857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028687	Mutyh	ENSMUST00000155346	ENSMUSP00000122777	TRANSLATION	nonsense_mediated_decay	-	-	1	136	0	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028687	Mutyh	ENSMUST00000140680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028687	Mutyh	ENSMUST00000130359	ENSMUSP00000122549	TRANSLATION	protein_coding	stop	-	5	68	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028687	Mutyh	ENSMUST00000102699	ENSMUSP00000099760	TRANSLATION	protein_coding	-	CCDS18518.1	1	515	17	10.7	1.5	129.4	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028687	Mutyh	ENSMUST00000135449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028687	Mutyh	ENSMUST00000138056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070618	BC080695	ENSMUST00000105765	ENSMUSP00000101391	TRANSLATION	protein_coding	-	CCDS51354.1	1	481	0	0	1.5	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000070618	BC080695	ENSMUST00000105774	ENSMUSP00000101400	TRANSLATION	protein_coding	-	CCDS51354.1	1	481	0	0	1.5	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028528	Dnajc6	ENSMUST00000149047	ENSMUSP00000119542	TRANSLATION	protein_coding	stop	-	3	194	0	4.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028528	Dnajc6	ENSMUST00000146489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028528	Dnajc6	ENSMUST00000094953	ENSMUSP00000092560	TRANSLATION	protein_coding	-	CCDS18395.1	1	900	0	11.85	5.1	97.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000028528	Dnajc6	ENSMUST00000106933	ENSMUSP00000102546	TRANSLATION	protein_coding	-	CCDS51238.1	1	968	0	11.85	3.9	97.2	0	-4,-6	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000028528	Dnajc6	ENSMUST00000106929	ENSMUSP00000102542	TRANSLATION	protein_coding	-	CCDS18395.1	1	900	0	11.85	5.1	97.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000028528	Dnajc6	ENSMUST00000106930	ENSMUSP00000102543	TRANSLATION	protein_coding	-	CCDS18395.1	1	900	0	11.85	5.1	97.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000028528	Dnajc6	ENSMUST00000154120	ENSMUSP00000114840	TRANSLATION	protein_coding	stop	-	5	514	0	8.05	0	97.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028528	Dnajc6	ENSMUST00000038207	ENSMUSP00000044251	TRANSLATION	protein_coding	-	CCDS51237.1	1	938	0	11.85	1.5	97.2	0	-4,-5	-	-	12.244	MINOR
ENSMUSG00000028217	Cdh17	ENSMUST00000029871	ENSMUSP00000029871	TRANSLATION	protein_coding	-	CCDS17972.1	1	827	56	10.24	3.9	189.1	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028217	Cdh17	ENSMUST00000108303	ENSMUSP00000103938	TRANSLATION	protein_coding	-	-	2	728	55	9.04	0	189.1	0	4,-1	-	-	14.934	MINOR
ENSMUSG00000037306	Man1c1	ENSMUST00000038628	ENSMUSP00000037949	TRANSLATION	protein_coding	-	CCDS18776.1	1	625	0	10.55	1.5	482.7	1	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037306	Man1c1	ENSMUST00000176606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037306	Man1c1	ENSMUST00000054096	ENSMUSP00000050979	TRANSLATION	protein_coding	-	CCDS18776.1	5	625	0	10.55	1.5	482.7	1	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039579	Grin3a	ENSMUST00000131797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039579	Grin3a	ENSMUST00000149059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039579	Grin3a	ENSMUST00000093859	ENSMUSP00000091381	TRANSLATION	protein_coding	-	CCDS71385.1	1	1135	12	5.275	1.5	220	3	2,-2	-	-	18.231	MINOR
ENSMUSG00000039579	Grin3a	ENSMUST00000076674	ENSMUSP00000075970	TRANSLATION	protein_coding	-	CCDS51175.1	1	1115	12	5.275	7.5	220	3	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033253	Szt2	ENSMUST00000130058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033253	Szt2	ENSMUST00000138386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033253	Szt2	ENSMUST00000138632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033253	Szt2	ENSMUST00000075406	ENSMUSP00000074862	TRANSLATION	protein_coding	-	CCDS51283.1	1	3431	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000033253	Szt2	ENSMUST00000136737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033253	Szt2	ENSMUST00000183402	ENSMUSP00000139348	TRANSLATION	nonsense_mediated_decay	start	-	1	559	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000148236	ENSMUSP00000158735	TRANSLATION	protein_coding	-	-	5	197	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238704	ENSMUSP00000158622	TRANSLATION	protein_coding	stop	-	-	586	0	0	0	498.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238287	ENSMUSP00000158749	TRANSLATION	protein_coding	-	-	-	172	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238723	ENSMUSP00000158653	TRANSLATION	protein_coding	-	-	-	172	0	0	0.5	82.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000131141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028637	Ccdc30	ENSMUST00000238485	ENSMUSP00000158814	TRANSLATION	protein_coding	-	CCDS57292.1	-	239	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000127474	ENSMUSP00000158694	TRANSLATION	protein_coding	-	-	1	156	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238293	ENSMUSP00000158680	TRANSLATION	protein_coding	-	-	-	649	0	0	0.5	505.1	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000028637	Ccdc30	ENSMUST00000238719	ENSMUSP00000158598	TRANSLATION	protein_coding	-	-	-	156	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000152879	ENSMUSP00000158630	TRANSLATION	protein_coding	-	-	1	115	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028637	Ccdc30	ENSMUST00000154606	ENSMUSP00000158729	TRANSLATION	protein_coding	-	-	1	172	0	0	0.5	82.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238759	ENSMUSP00000158825	TRANSLATION	protein_coding	-	CCDS38861.1	-	654	0	0	0.5	505.1	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000028637	Ccdc30	ENSMUST00000238697	ENSMUSP00000158783	TRANSLATION	protein_coding	-	-	-	711	0	0	1	505.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028637	Ccdc30	ENSMUST00000146186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028637	Ccdc30	ENSMUST00000238609	ENSMUSP00000158712	TRANSLATION	protein_coding	-	-	-	172	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000063642	ENSMUSP00000070621	TRANSLATION	protein_coding	-	-	1	652	0	0	0.5	505.1	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000028637	Ccdc30	ENSMUST00000238511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028637	Ccdc30	ENSMUST00000238721	ENSMUSP00000158701	TRANSLATION	protein_coding	-	CCDS57292.1	-	239	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000143494	ENSMUSP00000118202	TRANSLATION	protein_coding	-	-	3	197	0	0	0	252.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000124048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028637	Ccdc30	ENSMUST00000127149	ENSMUSP00000158782	TRANSLATION	protein_coding	-	-	1	222	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238779	ENSMUSP00000158811	TRANSLATION	protein_coding	start	-	-	308	0	0	0	252.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000044781	ENSMUSP00000047534	TRANSLATION	protein_coding	-	-	1	309	0	0	0	253.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000084307	ENSMUSP00000081332	TRANSLATION	protein_coding	-	CCDS57292.1	1	239	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238673	ENSMUSP00000158764	TRANSLATION	protein_coding	-	-	-	156	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238422	ENSMUSP00000158652	TRANSLATION	protein_coding	-	-	-	32	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028637	Ccdc30	ENSMUST00000238559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028637	Ccdc30	ENSMUST00000135997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028600	Podn	ENSMUST00000124265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028600	Podn	ENSMUST00000044248	ENSMUSP00000048962	TRANSLATION	protein_coding	-	CCDS18445.1	5	611	2	8.61	0.5	222	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028600	Podn	ENSMUST00000147597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028600	Podn	ENSMUST00000145491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028600	Podn	ENSMUST00000106709	ENSMUSP00000102320	TRANSLATION	protein_coding	-	CCDS18445.1	1	611	2	8.61	0.5	222	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028600	Podn	ENSMUST00000146851	ENSMUSP00000121478	TRANSLATION	protein_coding	start	-	1	409	2	4.62	0	106.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028600	Podn	ENSMUST00000106708	ENSMUSP00000102319	TRANSLATION	protein_coding	-	CCDS18445.1	1	611	2	8.61	0.5	222	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028600	Podn	ENSMUST00000130026	ENSMUSP00000123184	TRANSLATION	protein_coding	start	-	5	205	0	2.63	0	77.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059049	Frem1	ENSMUST00000071708	ENSMUSP00000071627	TRANSLATION	protein_coding	-	CCDS38791.1	1	2191	11	4.2	0.5	851.1	0	3,-1	-	-	17.274	PRINCIPAL:3
ENSMUSG00000059049	Frem1	ENSMUST00000133610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059049	Frem1	ENSMUST00000127886	ENSMUSP00000122467	TRANSLATION	protein_coding	start	-	1	415	11	0	0	213.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059049	Frem1	ENSMUST00000107230	ENSMUSP00000102849	TRANSLATION	protein_coding	-	CCDS57281.1	5	2172	11	4.2	0.5	863.2	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000059049	Frem1	ENSMUST00000131102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059049	Frem1	ENSMUST00000130889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059049	Frem1	ENSMUST00000170248	ENSMUSP00000125809	TRANSLATION	protein_coding	-	-	5	2173	11	4.2	0.5	863.2	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000059049	Frem1	ENSMUST00000141841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039838	Slc45a1	ENSMUST00000037827	ENSMUSP00000036774	TRANSLATION	protein_coding	-	CCDS18973.1	1	751	0	0	1.5	41.9	11	-4,-7	-	-	5.832	PRINCIPAL:2
ENSMUSG00000039838	Slc45a1	ENSMUST00000117997	ENSMUSP00000112737	TRANSLATION	protein_coding	-	-	1	675	0	0	0	43.1	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039838	Slc45a1	ENSMUST00000147706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028436	Dcaf12	ENSMUST00000030145	ENSMUSP00000030145	TRANSLATION	protein_coding	-	CCDS18059.1	1	453	0	0	8.8	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000028830	AU040320	ENSMUST00000125225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028830	AU040320	ENSMUST00000136035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028830	AU040320	ENSMUST00000154640	ENSMUSP00000122352	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028830	AU040320	ENSMUST00000047431	ENSMUSP00000037802	TRANSLATION	protein_coding	-	CCDS18661.1	1	1048	5	5.72	1.5	0	2	-4,-7	-	-	11	ALTERNATIVE:2
ENSMUSG00000028830	AU040320	ENSMUST00000148935	ENSMUSP00000117842	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028830	AU040320	ENSMUST00000102607	ENSMUSP00000099667	TRANSLATION	protein_coding	-	CCDS18660.1	1	1085	5	5.72	0.5	0	2	-4,-7	-	-	11	PRINCIPAL:4
ENSMUSG00000028830	AU040320	ENSMUST00000132660	ENSMUSP00000119146	TRANSLATION	protein_coding	stop	-	2	92	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028830	AU040320	ENSMUST00000141918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028830	AU040320	ENSMUST00000155341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028830	AU040320	ENSMUST00000102608	ENSMUSP00000099668	TRANSLATION	protein_coding	-	CCDS18660.1	1	1085	5	5.72	0.5	0	2	-4,-7	-	-	11	PRINCIPAL:4
ENSMUSG00000028830	AU040320	ENSMUST00000131900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028391	Wdr31	ENSMUST00000132263	ENSMUSP00000120684	TRANSLATION	protein_coding	start	-	5	112	0	1.92	0	21	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028391	Wdr31	ENSMUST00000155522	ENSMUSP00000123624	TRANSLATION	protein_coding	stop	-	3	83	0	1.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028391	Wdr31	ENSMUST00000146108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028391	Wdr31	ENSMUST00000120095	ENSMUSP00000112719	TRANSLATION	protein_coding	-	CCDS18240.1	1	367	0	6.03	7.5	84.3	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000028391	Wdr31	ENSMUST00000135811	ENSMUSP00000116182	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028391	Wdr31	ENSMUST00000153615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028391	Wdr31	ENSMUST00000107452	ENSMUSP00000103076	TRANSLATION	protein_coding	-	CCDS71402.1	1	366	0	6.03	7.5	84.3	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000028391	Wdr31	ENSMUST00000030087	ENSMUSP00000030087	TRANSLATION	protein_coding	-	CCDS18240.1	1	367	0	6.03	7.5	84.3	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000028391	Wdr31	ENSMUST00000149281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066036	Ubr4	ENSMUST00000145273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066036	Ubr4	ENSMUST00000133220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066036	Ubr4	ENSMUST00000141327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066036	Ubr4	ENSMUST00000129779	ENSMUSP00000114947	TRANSLATION	protein_coding	start/stop	-	2	204	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066036	Ubr4	ENSMUST00000145659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066036	Ubr4	ENSMUST00000147999	ENSMUSP00000117419	TRANSLATION	protein_coding	stop	-	2	1301	7	0	0	195.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066036	Ubr4	ENSMUST00000129949	ENSMUSP00000115711	TRANSLATION	protein_coding	start/stop	-	1	2065	4	0	0	29.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066036	Ubr4	ENSMUST00000135534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066036	Ubr4	ENSMUST00000165860	ENSMUSP00000125800	TRANSLATION	protein_coding	-	-	5	5156	11	0	0	1149.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000066036	Ubr4	ENSMUST00000149995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066036	Ubr4	ENSMUST00000097822	ENSMUSP00000095433	TRANSLATION	protein_coding	-	CCDS51340.1	5	5180	11	0	6.3	1149.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066036	Ubr4	ENSMUST00000136230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042788	Fam166b	ENSMUST00000155080	ENSMUSP00000133752	TRANSLATION	protein_coding	start	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042788	Fam166b	ENSMUST00000107929	ENSMUSP00000103562	TRANSLATION	protein_coding	-	-	5	273	0	0	0.5	61.4	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000042788	Fam166b	ENSMUST00000052829	ENSMUSP00000058980	TRANSLATION	protein_coding	-	CCDS51162.1	1	379	0	0	0.5	38.1	0	-4,-5	-	-	3.726	MINOR
ENSMUSG00000042788	Fam166b	ENSMUST00000107928	ENSMUSP00000103561	TRANSLATION	protein_coding	-	-	5	253	0	0	0	61.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000042788	Fam166b	ENSMUST00000171134	ENSMUSP00000127145	TRANSLATION	protein_coding	-	CCDS51163.1	1	245	0	0	0.5	38.1	0	-4,-5	-	-	3.726	MINOR
ENSMUSG00000042788	Fam166b	ENSMUST00000149676	ENSMUSP00000134319	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038607	Gng10	ENSMUST00000041160	ENSMUSP00000042705	TRANSLATION	protein_coding	-	CCDS18217.1	1	68	0	1.75	19	56.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038607	Gng10	ENSMUST00000126507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051557	Pusl1	ENSMUST00000142724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051557	Pusl1	ENSMUST00000150446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051557	Pusl1	ENSMUST00000097737	ENSMUSP00000095344	TRANSLATION	protein_coding	-	CCDS51404.1	5	291	1	3.05	1.5	114.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051557	Pusl1	ENSMUST00000123504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051557	Pusl1	ENSMUST00000130146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051557	Pusl1	ENSMUST00000129637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051557	Pusl1	ENSMUST00000142566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039523	Cep104	ENSMUST00000047497	ENSMUSP00000040762	TRANSLATION	protein_coding	-	CCDS19005.1	1	926	11	9.2	1.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039523	Cep104	ENSMUST00000183790	ENSMUSP00000139349	TRANSLATION	nonsense_mediated_decay	start	-	5	524	11	9.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039523	Cep104	ENSMUST00000155414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001334	Fndc5	ENSMUST00000102600	ENSMUSP00000099660	TRANSLATION	protein_coding	-	CCDS18683.1	1	209	0	2	3.9	41.5	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000073988	Ttpa	ENSMUST00000121491	ENSMUSP00000113966	TRANSLATION	protein_coding	-	CCDS84707.1	1	209	21	5.25	1.5	109.4	0	-4,-6	-	-	14.764	MINOR
ENSMUSG00000073988	Ttpa	ENSMUST00000125799	ENSMUSP00000117031	TRANSLATION	protein_coding	stop	-	3	90	11	2	0	28.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073988	Ttpa	ENSMUST00000117632	ENSMUSP00000113026	TRANSLATION	protein_coding	-	-	5	262	21	4.75	0	111.8	0	-4,-5	-	-	13.662	MINOR
ENSMUSG00000073988	Ttpa	ENSMUST00000098244	ENSMUSP00000095845	TRANSLATION	protein_coding	-	CCDS17995.1	1	278	21	6.25	5.1	134.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025329	Padi1	ENSMUST00000026378	ENSMUSP00000026378	TRANSLATION	protein_coding	-	CCDS18856.1	1	662	20	15.25	5.1	880.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000028671	Gale	ENSMUST00000149636	ENSMUSP00000117923	TRANSLATION	protein_coding	stop	-	3	60	9	1.5	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028671	Gale	ENSMUST00000102541	ENSMUSP00000099600	TRANSLATION	protein_coding	-	CCDS18796.1	1	347	26	8.75	8.8	198.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000028671	Gale	ENSMUST00000150430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028671	Gale	ENSMUST00000128929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028671	Gale	ENSMUST00000102540	ENSMUSP00000099599	TRANSLATION	protein_coding	-	CCDS18796.1	1	347	26	8.75	8.8	198.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000028671	Gale	ENSMUST00000143304	ENSMUSP00000119514	TRANSLATION	protein_coding	stop	-	3	57	9	1.5	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028671	Gale	ENSMUST00000153542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028840	Zfp593	ENSMUST00000030644	ENSMUSP00000030644	TRANSLATION	protein_coding	-	CCDS51325.1	1	134	4	2.75	7.5	32.1	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000028840	Zfp593	ENSMUST00000129183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040928	S100pbp	ENSMUST00000151971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040928	S100pbp	ENSMUST00000148112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040928	S100pbp	ENSMUST00000126748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040928	S100pbp	ENSMUST00000106061	ENSMUSP00000101676	TRANSLATION	protein_coding	-	CCDS18684.1	1	396	0	0	1.5	634.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040928	S100pbp	ENSMUST00000049081	ENSMUSP00000039820	TRANSLATION	protein_coding	-	CCDS18684.1	1	396	0	0	1.5	634.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040928	S100pbp	ENSMUST00000117497	ENSMUSP00000113084	TRANSLATION	protein_coding	stop	-	5	327	0	0	0	264.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040928	S100pbp	ENSMUST00000122942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040928	S100pbp	ENSMUST00000106059	ENSMUSP00000101674	TRANSLATION	protein_coding	-	CCDS84797.1	1	277	0	0	0.5	354.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040928	S100pbp	ENSMUST00000072431	ENSMUSP00000072258	TRANSLATION	protein_coding	-	-	1	318	0	0	0	392.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040928	S100pbp	ENSMUST00000142490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040928	S100pbp	ENSMUST00000117965	ENSMUSP00000113920	TRANSLATION	protein_coding	stop	-	5	327	0	0	0	264.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040928	S100pbp	ENSMUST00000117350	ENSMUSP00000113214	TRANSLATION	protein_coding	-	-	1	371	0	0	0	488.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040928	S100pbp	ENSMUST00000148920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040928	S100pbp	ENSMUST00000137992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029063	Nadk	ENSMUST00000143840	ENSMUSP00000115732	TRANSLATION	protein_coding	stop	-	2	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029063	Nadk	ENSMUST00000105613	ENSMUSP00000101238	TRANSLATION	protein_coding	-	CCDS19031.1	1	439	14	8.964	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029063	Nadk	ENSMUST00000135429	ENSMUSP00000114288	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029063	Nadk	ENSMUST00000030939	ENSMUSP00000030939	TRANSLATION	protein_coding	-	CCDS19031.1	1	439	14	8.964	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029063	Nadk	ENSMUST00000147062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029063	Nadk	ENSMUST00000146080	ENSMUSP00000117504	TRANSLATION	protein_coding	stop	-	3	85	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029063	Nadk	ENSMUST00000105612	ENSMUSP00000101237	TRANSLATION	protein_coding	-	-	5	363	14	8.2	0	0	0	-4,-5	-	-	10.47	MINOR
ENSMUSG00000029063	Nadk	ENSMUST00000152297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028426	Rad23b	ENSMUST00000156263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028426	Rad23b	ENSMUST00000030134	ENSMUSP00000030134	TRANSLATION	protein_coding	-	CCDS18194.1	1	416	0	7.23	1.5	254.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028426	Rad23b	ENSMUST00000127266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028426	Rad23b	ENSMUST00000148719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081362	Cyp2j7	ENSMUST00000162514	ENSMUSP00000134331	TRANSLATION	protein_coding	-	-	5	504	32	8.22	0.5	429.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056300	Zfp981	ENSMUST00000179175	ENSMUSP00000136739	TRANSLATION	protein_coding	-	CCDS57311.1	2	445	28	1.8	0.5	221.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056300	Zfp981	ENSMUST00000140089	ENSMUSP00000115886	TRANSLATION	protein_coding	stop	-	2	133	0	1	0	69.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056300	Zfp981	ENSMUST00000105735	ENSMUSP00000101361	TRANSLATION	protein_coding	-	CCDS57311.1	2	445	28	1.8	0.5	221.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028550	Atg4c	ENSMUST00000152121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028550	Atg4c	ENSMUST00000030279	ENSMUSP00000030279	TRANSLATION	protein_coding	-	CCDS18382.1	1	458	0	3.44	3.9	344.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028550	Atg4c	ENSMUST00000180278	ENSMUSP00000137035	TRANSLATION	protein_coding	-	CCDS18382.1	5	458	0	3.44	3.9	344.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073792	Alg6	ENSMUST00000097961	ENSMUSP00000095574	TRANSLATION	protein_coding	-	CCDS38818.1	1	507	2	0	6.3	474	11	3,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000073792	Alg6	ENSMUST00000139799	ENSMUSP00000121980	TRANSLATION	protein_coding	stop	-	3	158	2	0	0	91.5	4	3,-2	-	-	-1	MINOR
ENSMUSG00000073792	Alg6	ENSMUST00000137473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073792	Alg6	ENSMUST00000107004	ENSMUSP00000102617	TRANSLATION	protein_coding	stop	-	3	204	2	0	0	185.9	6	3,-2	-	-	-1	MINOR
ENSMUSG00000073792	Alg6	ENSMUST00000141870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073792	Alg6	ENSMUST00000144805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073792	Alg6	ENSMUST00000124147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028381	Ugcg	ENSMUST00000030074	ENSMUSP00000030074	TRANSLATION	protein_coding	-	CCDS18219.1	1	394	0	0	17.5	197.2	0	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028381	Ugcg	ENSMUST00000155153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028381	Ugcg	ENSMUST00000133996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028381	Ugcg	ENSMUST00000128227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039809	Gabbr2	ENSMUST00000107749	ENSMUSP00000103378	TRANSLATION	protein_coding	-	CCDS38758.1	2	940	0	12.56	1.5	385.8	10	0,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039809	Gabbr2	ENSMUST00000129328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039809	Gabbr2	ENSMUST00000205643	ENSMUSP00000146296	TRANSLATION	protein_coding	start/stop	-	5	183	0	1.58	0	121.4	7	-2,-6	-	-	-1	MINOR
ENSMUSG00000039809	Gabbr2	ENSMUST00000206773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050810	Oog3	ENSMUST00000050933	ENSMUSP00000059834	TRANSLATION	protein_coding	-	CCDS51361.1	1	500	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000049119	Fam110b	ENSMUST00000126564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049119	Fam110b	ENSMUST00000054857	ENSMUSP00000062734	TRANSLATION	protein_coding	-	CCDS17948.1	1	366	0	0	9.9	274	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000049119	Fam110b	ENSMUST00000108380	ENSMUSP00000104017	TRANSLATION	protein_coding	-	CCDS17948.1	1	366	0	0	9.9	274	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000049119	Fam110b	ENSMUST00000156582	ENSMUSP00000122351	TRANSLATION	protein_coding	stop	-	1	87	0	0	0	144.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049119	Fam110b	ENSMUST00000144605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049119	Fam110b	ENSMUST00000141479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049119	Fam110b	ENSMUST00000124256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049119	Fam110b	ENSMUST00000145365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049119	Fam110b	ENSMUST00000171403	ENSMUSP00000127942	TRANSLATION	protein_coding	-	CCDS17948.1	1	366	0	0	9.9	274	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035572	Dcaf10	ENSMUST00000130821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035572	Dcaf10	ENSMUST00000153803	ENSMUSP00000121616	TRANSLATION	protein_coding	start	-	5	225	0	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035572	Dcaf10	ENSMUST00000107798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035572	Dcaf10	ENSMUST00000155551	ENSMUSP00000117082	TRANSLATION	protein_coding	-	CCDS38754.1	1	566	0	2.1	1.5	36.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078503	Zfp990	ENSMUST00000105741	ENSMUSP00000101367	TRANSLATION	protein_coding	-	CCDS84822.1	3	605	52	1.664	0.5	365.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078503	Zfp990	ENSMUST00000136309	ENSMUSP00000122038	TRANSLATION	protein_coding	stop	-	2	44	0	1	0	62.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078503	Zfp990	ENSMUST00000105742	ENSMUSP00000101368	TRANSLATION	protein_coding	-	CCDS84822.1	2	605	52	1.664	0.5	365.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078503	Zfp990	ENSMUST00000128939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007872	Id3	ENSMUST00000133946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007872	Id3	ENSMUST00000151001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007872	Id3	ENSMUST00000008016	ENSMUSP00000008016	TRANSLATION	protein_coding	-	CCDS18800.1	1	119	0	1	8.8	40.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000078772	Gm12353	ENSMUST00000108250	ENSMUSP00000103885	TRANSLATION	protein_coding	-	-	2	60	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028571	Cyp2j13	ENSMUST00000107078	ENSMUSP00000102693	TRANSLATION	protein_coding	-	-	1	374	18	5.64	0	262	1	0,-3	-	-	0	MINOR
ENSMUSG00000028571	Cyp2j13	ENSMUST00000132513	ENSMUSP00000121962	TRANSLATION	protein_coding	start	-	3	156	14	2.8	0	165.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028571	Cyp2j13	ENSMUST00000030305	ENSMUSP00000030305	TRANSLATION	protein_coding	-	CCDS18368.1	1	503	32	9.45	0.5	432	1	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028571	Cyp2j13	ENSMUST00000097973	ENSMUSP00000095587	TRANSLATION	protein_coding	-	CCDS84755.1	5	433	21	6.94	0.5	318	1	0,-3	-	-	0.978	MINOR
ENSMUSG00000044518	Foxe3	ENSMUST00000050940	ENSMUSP00000050445	TRANSLATION	protein_coding	-	CCDS18483.1	-	288	0	0.6	1.5	122.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035305	Ror1	ENSMUST00000039630	ENSMUSP00000048171	TRANSLATION	protein_coding	-	CCDS18389.1	1	937	18	1	2.7	496.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028868	Wasf2	ENSMUST00000136637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028868	Wasf2	ENSMUST00000138831	ENSMUSP00000117314	TRANSLATION	protein_coding	stop	-	2	85	0	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028868	Wasf2	ENSMUST00000136132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028868	Wasf2	ENSMUST00000105912	ENSMUSP00000101532	TRANSLATION	protein_coding	-	CCDS18742.1	1	497	0	5.4	0.5	28.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028868	Wasf2	ENSMUST00000084241	ENSMUSP00000081263	TRANSLATION	protein_coding	-	CCDS18742.1	1	497	0	5.4	0.5	28.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028868	Wasf2	ENSMUST00000123578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049799	Lrrc19	ENSMUST00000053419	ENSMUSP00000056094	TRANSLATION	protein_coding	-	CCDS18360.1	1	364	0	1.48	0.5	184.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000049799	Lrrc19	ENSMUST00000107101	ENSMUSP00000102718	TRANSLATION	protein_coding	-	CCDS18360.1	1	364	0	1.48	0.5	184.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024793	Tnfrsf25	ENSMUST00000153619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024793	Tnfrsf25	ENSMUST00000025706	ENSMUSP00000025706	TRANSLATION	protein_coding	-	CCDS71527.1	1	411	0	2.73	0.5	86	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024793	Tnfrsf25	ENSMUST00000035275	ENSMUSP00000047823	TRANSLATION	protein_coding	-	CCDS38983.1	1	387	0	2.08	0.5	86	0	-1,-5	-	-	10.572	MINOR
ENSMUSG00000024793	Tnfrsf25	ENSMUST00000127111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028419	Chmp5	ENSMUST00000030128	ENSMUSP00000030128	TRANSLATION	protein_coding	-	CCDS18053.1	1	219	0	3.61	19.5	187.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028909	Ptpru	ENSMUST00000097860	ENSMUSP00000095472	TRANSLATION	protein_coding	-	-	1	907	0	11.48	0	170.5	2	-4,-7	-	-	0	MINOR
ENSMUSG00000028909	Ptpru	ENSMUST00000144136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028909	Ptpru	ENSMUST00000154224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028909	Ptpru	ENSMUST00000139641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028909	Ptpru	ENSMUST00000030741	ENSMUSP00000030741	TRANSLATION	protein_coding	-	CCDS38896.1	5	1446	16	22.17	7.5	638.8	2	2,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000028909	Ptpru	ENSMUST00000123878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028909	Ptpru	ENSMUST00000105987	ENSMUSP00000101607	TRANSLATION	protein_coding	-	CCDS18714.1	1	1436	16	22.17	7.5	638.8	2	2,-2	-	-	21	PRINCIPAL:3
ENSMUSG00000028909	Ptpru	ENSMUST00000127633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006699	Cdc42	ENSMUST00000030417	ENSMUSP00000030417	TRANSLATION	protein_coding	-	CCDS57305.1	2	191	23	4.5	19.5	179.9	0	-4,-5	-	-	21.94	ALTERNATIVE:1
ENSMUSG00000006699	Cdc42	ENSMUST00000051477	ENSMUSP00000054634	TRANSLATION	protein_coding	-	CCDS18816.1	1	191	23	4.5	19.5	180.9	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000043572	Pars2	ENSMUST00000146966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043572	Pars2	ENSMUST00000106781	ENSMUSP00000102393	TRANSLATION	protein_coding	-	CCDS38828.1	1	511	23	1.2	0.5	151.3	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000043572	Pars2	ENSMUST00000058905	ENSMUSP00000053160	TRANSLATION	protein_coding	-	CCDS18423.1	1	475	23	1.2	1.5	151.3	0	-4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000043572	Pars2	ENSMUST00000106782	ENSMUSP00000102394	TRANSLATION	protein_coding	stop	-	2	163	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000084782	Gm11213	ENSMUST00000210529	ENSMUSP00000147417	TRANSLATION	protein_coding	-	-	1	88	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000084782	Gm11213	ENSMUST00000136620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057236	Rbbp4	ENSMUST00000147183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057236	Rbbp4	ENSMUST00000135585	ENSMUSP00000116517	TRANSLATION	protein_coding	stop	-	3	48	0	1.5	0	54.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057236	Rbbp4	ENSMUST00000140291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057236	Rbbp4	ENSMUST00000102598	ENSMUSP00000099658	TRANSLATION	protein_coding	-	CCDS18688.1	1	425	0	11.08	17.5	194.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078598	Skint5	ENSMUST00000170105	ENSMUSP00000129582	TRANSLATION	protein_coding	-	-	1	1454	0	1.95	0.5	48	3	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000078598	Skint5	ENSMUST00000171627	ENSMUSP00000130639	TRANSLATION	protein_coding	stop	-	5	519	0	1.95	0	48	1	1,-4	-	-	-1	MINOR
ENSMUSG00000078598	Skint5	ENSMUST00000153413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078598	Skint5	ENSMUST00000169631	ENSMUSP00000132470	TRANSLATION	protein_coding	-	-	1	1475	0	1.95	0.5	48	3	-4,-7	-	-	12	PRINCIPAL:5
ENSMUSG00000066196	Spag8	ENSMUST00000084646	ENSMUSP00000081696	TRANSLATION	protein_coding	-	CCDS71376.1	1	470	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000066196	Spag8	ENSMUST00000149575	ENSMUSP00000131825	TRANSLATION	protein_coding	start	-	5	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066196	Spag8	ENSMUST00000107870	ENSMUSP00000103502	TRANSLATION	protein_coding	-	CCDS38743.1	1	411	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000028599	Tnfrsf1b	ENSMUST00000143055	ENSMUSP00000115702	TRANSLATION	nonsense_mediated_decay	-	-	3	55	0	0.264	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000028599	Tnfrsf1b	ENSMUST00000030336	ENSMUSP00000030336	TRANSLATION	protein_coding	-	CCDS18914.1	1	474	0	4.514	1.5	61.2	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000049410	Zfp683	ENSMUST00000105884	ENSMUSP00000101508	TRANSLATION	protein_coding	-	-	5	458	15	1.4	0	64.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073682	Gm10563	ENSMUST00000115821	ENSMUSP00000111488	TRANSLATION	protein_coding	start/stop	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000047636	Cdcp2	ENSMUST00000221740	ENSMUSP00000152236	TRANSLATION	protein_coding	-	-	5	540	13	2.26	3.4	314.2	0	3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000047636	Cdcp2	ENSMUST00000062495	ENSMUSP00000061401	TRANSLATION	protein_coding	-	CCDS18430.1	1	427	13	2.08	0.5	291	0	3,-1	-	-	16.128	MINOR
ENSMUSG00000070616	Gm13040	ENSMUST00000094521	ENSMUSP00000092098	TRANSLATION	protein_coding	-	-	1	481	0	0	1.5	0	0	-3,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000070616	Gm13040	ENSMUST00000169056	ENSMUSP00000127296	TRANSLATION	protein_coding	-	CCDS51352.1	5	496	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000078674	Mup18	ENSMUST00000098040	ENSMUSP00000095648	TRANSLATION	protein_coding	-	CCDS51199.1	1	181	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000050323	Ndufaf6	ENSMUST00000154122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000144475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000126468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000148127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000124607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000141019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050323	Ndufaf6	ENSMUST00000058183	ENSMUSP00000062039	TRANSLATION	protein_coding	-	CCDS38691.1	1	333	0	0	2.7	203.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000070609	Aadacl4	ENSMUST00000094510	ENSMUSP00000092087	TRANSLATION	protein_coding	-	CCDS38956.1	1	407	4	1.44	0.5	0	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000041241	Mul1	ENSMUST00000105815	ENSMUSP00000101441	TRANSLATION	protein_coding	-	-	3	123	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000041241	Mul1	ENSMUST00000105813	ENSMUSP00000101439	TRANSLATION	protein_coding	-	-	5	347	8	0	0.5	118.2	1	-4,-7	-	-	12	MINOR
ENSMUSG00000041241	Mul1	ENSMUST00000044058	ENSMUSP00000039604	TRANSLATION	protein_coding	-	CCDS18828.1	1	352	8	0	7.6	118.2	2	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028536	2610528J11Rik	ENSMUST00000030261	ENSMUSP00000030261	TRANSLATION	protein_coding	-	CCDS18554.1	1	111	2	0	0.5	71.2	1	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000028536	2610528J11Rik	ENSMUST00000106367	ENSMUSP00000101975	TRANSLATION	protein_coding	-	CCDS18554.1	2	111	2	0	0.5	71.2	1	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000028799	Zfp362	ENSMUST00000170934	ENSMUSP00000128499	TRANSLATION	protein_coding	stop	-	3	367	22	2.55	0	106.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028799	Zfp362	ENSMUST00000106072	ENSMUSP00000101686	TRANSLATION	protein_coding	-	CCDS38884.1	5	418	24	2.75	8.8	124.9	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000028799	Zfp362	ENSMUST00000071108	ENSMUSP00000065733	TRANSLATION	protein_coding	-	CCDS38884.1	1	418	24	2.75	8.8	124.9	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000028799	Zfp362	ENSMUST00000138371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041556	Fbxo2	ENSMUST00000047951	ENSMUSP00000037377	TRANSLATION	protein_coding	-	CCDS18935.1	1	297	5	5.33	1.5	272.2	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000053317	Sec61b	ENSMUST00000125622	ENSMUSP00000114184	TRANSLATION	protein_coding	stop	-	2	117	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000053317	Sec61b	ENSMUST00000136685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053317	Sec61b	ENSMUST00000065678	ENSMUSP00000067681	TRANSLATION	protein_coding	-	CCDS38759.1	1	96	0	2.75	17	68.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000053317	Sec61b	ENSMUST00000137461	ENSMUSP00000120880	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000028351	Brinp1	ENSMUST00000030036	ENSMUSP00000030036	TRANSLATION	protein_coding	-	CCDS18272.1	1	760	0	0	16	27.2	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028351	Brinp1	ENSMUST00000156773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028351	Brinp1	ENSMUST00000140572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039853	Trim14	ENSMUST00000102924	ENSMUSP00000099988	TRANSLATION	protein_coding	-	-	2	283	8	1.88	0	46.1	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000039853	Trim14	ENSMUST00000184112	ENSMUSP00000138876	TRANSLATION	nonsense_mediated_decay	-	-	2	178	8	1.4	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039853	Trim14	ENSMUST00000142502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039853	Trim14	ENSMUST00000136978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039853	Trim14	ENSMUST00000046897	ENSMUSP00000038719	TRANSLATION	protein_coding	-	CCDS18153.1	1	440	8	2.68	1.5	142.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039853	Trim14	ENSMUST00000142606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034853	Acot11	ENSMUST00000148688	ENSMUSP00000124385	TRANSLATION	protein_coding	stop	-	5	92	4	1.55	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034853	Acot11	ENSMUST00000065253	ENSMUSP00000069636	TRANSLATION	protein_coding	-	CCDS84764.1	1	614	19	12.49	0.5	188.3	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000034853	Acot11	ENSMUST00000145061	ENSMUSP00000125123	TRANSLATION	protein_coding	stop	-	5	107	6	1.88	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034853	Acot11	ENSMUST00000156567	ENSMUSP00000123942	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0.932	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034853	Acot11	ENSMUST00000144809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034853	Acot11	ENSMUST00000102762	ENSMUSP00000099823	TRANSLATION	protein_coding	-	CCDS18426.1	1	594	19	12.49	2.7	188.3	0	-4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000034853	Acot11	ENSMUST00000140541	ENSMUSP00000124567	TRANSLATION	nonsense_mediated_decay	start	-	5	76	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029005	Draxin	ENSMUST00000030862	ENSMUSP00000030862	TRANSLATION	protein_coding	-	CCDS18931.1	1	343	0	0	1.5	449.6	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000028971	Cort	ENSMUST00000030815	ENSMUSP00000030815	TRANSLATION	protein_coding	-	CCDS18953.1	1	109	0	0	1.5	39	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000050188	Lsm10	ENSMUST00000179323	ENSMUSP00000136585	TRANSLATION	protein_coding	-	CCDS18642.1	2	122	0	0.75	12.8	49.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000050188	Lsm10	ENSMUST00000055575	ENSMUSP00000061913	TRANSLATION	protein_coding	-	CCDS18642.1	1	122	0	0.75	12.8	49.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000050188	Lsm10	ENSMUST00000151831	ENSMUSP00000119610	TRANSLATION	protein_coding	stop	-	2	93	0	0.6	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029656	C8b	ENSMUST00000065072	ENSMUSP00000066940	TRANSLATION	protein_coding	-	CCDS84762.1	1	523	11	9.75	0.5	197.5	0	1,-1	-	-	15.918	MINOR
ENSMUSG00000029656	C8b	ENSMUST00000031663	ENSMUSP00000031663	TRANSLATION	protein_coding	-	CCDS18414.1	1	589	11	10.75	1.5	198.9	0	1,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029656	C8b	ENSMUST00000123892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000147124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000136005	ENSMUSP00000118144	TRANSLATION	protein_coding	start/stop	-	5	256	2	2.96	0	60.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000051517	Arhgef39	ENSMUST00000128754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000125834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000154905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000152134	ENSMUSP00000119911	TRANSLATION	protein_coding	start	-	3	92	2	0.76	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051517	Arhgef39	ENSMUST00000054538	ENSMUSP00000055293	TRANSLATION	protein_coding	-	CCDS18098.1	1	344	2	5.37	1.5	107.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000051517	Arhgef39	ENSMUST00000129378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000156058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051517	Arhgef39	ENSMUST00000146781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028763	Hspg2	ENSMUST00000030547	ENSMUSP00000030547	TRANSLATION	protein_coding	-	-	5	4375	28	43.505	0	2086.4	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000028763	Hspg2	ENSMUST00000155648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028763	Hspg2	ENSMUST00000171332	ENSMUSP00000131316	TRANSLATION	protein_coding	-	CCDS51333.1	5	4383	28	43.505	0.5	2086.4	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000028763	Hspg2	ENSMUST00000238544	ENSMUSP00000158633	TRANSLATION	protein_coding	start/stop	-	-	239	0	0.96	0	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034042	Gpbp1l1	ENSMUST00000106475	ENSMUSP00000102083	TRANSLATION	protein_coding	-	CCDS18511.1	1	473	0	0	0.5	140.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034042	Gpbp1l1	ENSMUST00000030460	ENSMUSP00000030460	TRANSLATION	protein_coding	-	CCDS18511.1	1	473	0	0	0.5	140.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034042	Gpbp1l1	ENSMUST00000131913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034042	Gpbp1l1	ENSMUST00000138837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052407	Ccdc171	ENSMUST00000053414	ENSMUSP00000056520	TRANSLATION	protein_coding	-	-	5	1324	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000052407	Ccdc171	ENSMUST00000231339	ENSMUSP00000155912	TRANSLATION	protein_coding	-	-	-	1332	0	0	1.7	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000052407	Ccdc171	ENSMUST00000125077	ENSMUSP00000116486	TRANSLATION	nonsense_mediated_decay	-	-	1	368	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052407	Ccdc171	ENSMUST00000107202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052407	Ccdc171	ENSMUST00000183729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052407	Ccdc171	ENSMUST00000126429	ENSMUSP00000138195	TRANSLATION	protein_coding	-	-	1	132	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000028876	Epha10	ENSMUST00000059343	ENSMUSP00000050810	TRANSLATION	protein_coding	-	CCDS18630.1	1	292	0	2.75	1.7	223	0	-1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000028876	Epha10	ENSMUST00000151791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028876	Epha10	ENSMUST00000149146	ENSMUSP00000118801	TRANSLATION	protein_coding	start	-	5	862	17	10.79	0	518.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060206	Zfp462	ENSMUST00000030131	ENSMUSP00000030131	TRANSLATION	protein_coding	-	-	5	1407	84	2.96	0	66.5	0	-4,-5	-	-	14.664	MINOR
ENSMUSG00000060206	Zfp462	ENSMUST00000079605	ENSMUSP00000078555	TRANSLATION	protein_coding	-	-	5	1408	84	2.96	0	66.5	0	-4,-5	-	-	14.664	MINOR
ENSMUSG00000060206	Zfp462	ENSMUST00000098070	ENSMUSP00000095677	TRANSLATION	protein_coding	-	CCDS38764.1	5	2495	89	2.56	0.5	66.5	0	-4,-5	-	-	17.19	PRINCIPAL:1
ENSMUSG00000060206	Zfp462	ENSMUST00000133895	ENSMUSP00000122775	TRANSLATION	protein_coding	stop	-	5	93	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067919	Rex2	ENSMUST00000075775	ENSMUSP00000075179	TRANSLATION	protein_coding	-	CCDS51374.1	2	685	60	1.4	0.5	401.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000067919	Rex2	ENSMUST00000150197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028804	Csmd2	ENSMUST00000144298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028804	Csmd2	ENSMUST00000221199	ENSMUSP00000152795	TRANSLATION	protein_coding	start	-	5	302	0	0.56	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028804	Csmd2	ENSMUST00000139561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028804	Csmd2	ENSMUST00000129619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028804	Csmd2	ENSMUST00000184063	ENSMUSP00000138958	TRANSLATION	protein_coding	-	CCDS84795.1	5	3611	35	26.56	2.7	1972.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000028804	Csmd2	ENSMUST00000148247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073771	Btbd19	ENSMUST00000125896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073771	Btbd19	ENSMUST00000123346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073771	Btbd19	ENSMUST00000143213	ENSMUSP00000138246	TRANSLATION	nonsense_mediated_decay	-	-	3	33	0	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073771	Btbd19	ENSMUST00000097915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073771	Btbd19	ENSMUST00000153303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073771	Btbd19	ENSMUST00000181979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073771	Btbd19	ENSMUST00000153924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073771	Btbd19	ENSMUST00000153257	ENSMUSP00000121768	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073771	Btbd19	ENSMUST00000183310	ENSMUSP00000138230	TRANSLATION	protein_coding	-	-	5	287	0	3.63	5.8	106.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000052117	D630039A03Rik	ENSMUST00000063816	ENSMUSP00000068932	TRANSLATION	protein_coding	-	CCDS18206.1	1	236	0	0	1.5	99.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000006215	Zbtb17	ENSMUST00000006377	ENSMUSP00000006377	TRANSLATION	protein_coding	-	CCDS18875.1	1	794	52	8.4	1.5	322.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006215	Zbtb17	ENSMUST00000142438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006215	Zbtb17	ENSMUST00000123477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006215	Zbtb17	ENSMUST00000142695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006215	Zbtb17	ENSMUST00000144899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006215	Zbtb17	ENSMUST00000130482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006215	Zbtb17	ENSMUST00000142020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028967	Errfi1	ENSMUST00000073600	ENSMUSP00000073285	TRANSLATION	protein_coding	-	CCDS18974.1	1	461	0	0.4	3.9	77.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028967	Errfi1	ENSMUST00000030811	ENSMUSP00000030811	TRANSLATION	protein_coding	-	CCDS18974.1	1	461	0	0.4	3.9	77.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028967	Errfi1	ENSMUST00000128640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028848	Gpn2	ENSMUST00000148909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028848	Gpn2	ENSMUST00000030661	ENSMUSP00000030661	TRANSLATION	protein_coding	-	CCDS18753.1	1	310	15	1.78	7.5	263.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000028848	Gpn2	ENSMUST00000105899	ENSMUSP00000101519	TRANSLATION	protein_coding	-	CCDS71484.1	5	287	14	1.54	0.5	225	0	-4,-6	-	-	14.214	MINOR
ENSMUSG00000078495	Zfp984	ENSMUST00000122309	ENSMUSP00000114023	TRANSLATION	protein_coding	-	CCDS57314.1	5	547	44	0.6	0.5	326.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000078495	Zfp984	ENSMUST00000105734	ENSMUSP00000101360	TRANSLATION	protein_coding	-	CCDS57314.1	3	547	44	0.6	0.5	326.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000054885	4930578G10Rik	ENSMUST00000145453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054885	4930578G10Rik	ENSMUST00000107984	ENSMUSP00000103618	TRANSLATION	protein_coding	-	-	2	153	0	0	0	0	0	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000054885	4930578G10Rik	ENSMUST00000068158	ENSMUSP00000068585	TRANSLATION	protein_coding	-	-	5	153	0	0	0	0	0	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028367	Txn1	ENSMUST00000030051	ENSMUSP00000030051	TRANSLATION	protein_coding	-	CCDS18207.1	1	105	6	3.58	10.8	110.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000052520	Cyp2j5	ENSMUST00000030299	ENSMUSP00000030299	TRANSLATION	protein_coding	-	CCDS18371.1	1	501	31	8.28	0.5	464.2	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000028409	Smu1	ENSMUST00000130503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028409	Smu1	ENSMUST00000030117	ENSMUSP00000030117	TRANSLATION	protein_coding	-	CCDS18050.1	1	513	0	9.09	19.5	131.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028409	Smu1	ENSMUST00000137415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028409	Smu1	ENSMUST00000150574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032744	Heyl	ENSMUST00000040821	ENSMUSP00000040576	TRANSLATION	protein_coding	-	CCDS18613.1	1	326	0	1.55	1.5	98.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032744	Heyl	ENSMUST00000151870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032744	Heyl	ENSMUST00000127172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036940	Kdm1a	ENSMUST00000155354	ENSMUSP00000114268	TRANSLATION	protein_coding	start/stop	-	3	250	0	5.58	0	41.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036940	Kdm1a	ENSMUST00000105847	ENSMUSP00000101473	TRANSLATION	protein_coding	-	CCDS84806.1	5	873	37	21.08	0.5	510.5	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000036940	Kdm1a	ENSMUST00000171424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036940	Kdm1a	ENSMUST00000139690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036940	Kdm1a	ENSMUST00000046846	ENSMUSP00000035457	TRANSLATION	protein_coding	start	-	5	683	37	17.33	0	506.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036940	Kdm1a	ENSMUST00000125111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036940	Kdm1a	ENSMUST00000170979	ENSMUSP00000131385	TRANSLATION	protein_coding	start/stop	-	5	322	18	9.25	0	167	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036940	Kdm1a	ENSMUST00000116273	ENSMUSP00000111977	TRANSLATION	protein_coding	-	CCDS51331.1	1	853	37	20.33	0.5	510.5	0	-1,-4	-	-	16.5	MINOR
ENSMUSG00000036940	Kdm1a	ENSMUST00000147886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063882	Uqcrh	ENSMUST00000134760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063882	Uqcrh	ENSMUST00000142468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063882	Uqcrh	ENSMUST00000078676	ENSMUSP00000077744	TRANSLATION	protein_coding	-	CCDS38846.1	1	89	0	2.66	7.5	82.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000063882	Uqcrh	ENSMUST00000050580	ENSMUSP00000052395	TRANSLATION	protein_coding	-	-	1	54	0	1.66	0	48.3	0	-4,-5	-	-	7.254	MINOR
ENSMUSG00000063882	Uqcrh	ENSMUST00000127175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029001	Fbxo44	ENSMUST00000153703	ENSMUSP00000115937	TRANSLATION	nonsense_mediated_decay	start	-	3	144	0	4.66	0	164.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000172472	ENSMUSP00000133966	TRANSLATION	nonsense_mediated_decay	-	-	5	133	0	2.96	0	69.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000057907	ENSMUSP00000054022	TRANSLATION	protein_coding	-	CCDS18934.1	1	255	0	7.16	6.3	275.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029001	Fbxo44	ENSMUST00000151246	ENSMUSP00000114571	TRANSLATION	protein_coding	stop	-	5	232	0	6.41	0	244.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000122913	ENSMUSP00000120874	TRANSLATION	nonsense_mediated_decay	-	-	5	117	0	2.46	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000167160	ENSMUSP00000126551	TRANSLATION	protein_coding	-	CCDS18934.1	5	255	0	7.16	6.3	275.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029001	Fbxo44	ENSMUST00000151127	ENSMUSP00000134064	TRANSLATION	protein_coding	-	-	1	276	0	5.66	0	193.6	0	-4,-5	-	-	4.068	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000129253	ENSMUSP00000117013	TRANSLATION	nonsense_mediated_decay	-	-	1	218	0	5.66	0	194.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000105705	ENSMUSP00000101330	TRANSLATION	protein_coding	-	CCDS51377.1	2	224	0	2.75	2.9	69.6	0	-4,-5	-	-	0.716	MINOR
ENSMUSG00000029001	Fbxo44	ENSMUST00000173352	ENSMUSP00000134624	TRANSLATION	protein_coding	stop	-	3	254	0	5.33	0	184.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074088	Snrnp40	ENSMUST00000181560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074088	Snrnp40	ENSMUST00000105994	ENSMUSP00000101616	TRANSLATION	protein_coding	-	CCDS38892.1	1	358	0	9	7.5	167.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074088	Snrnp40	ENSMUST00000180577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074088	Snrnp40	ENSMUST00000181161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028914	Casp9	ENSMUST00000128660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028914	Casp9	ENSMUST00000030747	ENSMUSP00000030747	TRANSLATION	protein_coding	-	CCDS18883.1	1	454	3	8.814	1.5	227	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028914	Casp9	ENSMUST00000153094	ENSMUSP00000121331	TRANSLATION	protein_coding	stop	-	3	215	0	2.814	0	75	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028914	Casp9	ENSMUST00000124161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028914	Casp9	ENSMUST00000097805	ENSMUSP00000095414	TRANSLATION	protein_coding	-	CCDS71510.1	1	405	3	6.964	0.5	175.2	0	-4,-6	-	-	8.19	MINOR
ENSMUSG00000028914	Casp9	ENSMUST00000138359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032978	Guca2b	ENSMUST00000044426	ENSMUSP00000043203	TRANSLATION	protein_coding	-	CCDS18587.1	1	106	0	0.67	1.5	110.1	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000032978	Guca2b	ENSMUST00000106309	ENSMUSP00000101916	TRANSLATION	protein_coding	-	-	3	130	0	0.67	0	100.8	0	-2,0	-	-	11.442	ALTERNATIVE:2
ENSMUSG00000073811	Ifna12	ENSMUST00000102806	ENSMUSP00000099870	TRANSLATION	protein_coding	-	CCDS18322.1	-	189	3	1	3.9	210.9	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000078496	Zfp982	ENSMUST00000105721	ENSMUSP00000101346	TRANSLATION	protein_coding	-	CCDS84824.1	3	368	37	0.8	0.5	245.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000078496	Zfp982	ENSMUST00000063704	ENSMUSP00000068021	TRANSLATION	protein_coding	-	CCDS84824.1	3	368	37	0.8	0.5	245.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000045004	Spata21	ENSMUST00000181353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045004	Spata21	ENSMUST00000051907	ENSMUSP00000053080	TRANSLATION	protein_coding	-	CCDS18863.1	1	681	5	1.44	0.5	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000078508	Gm13128	ENSMUST00000105751	ENSMUSP00000101377	TRANSLATION	protein_coding	-	CCDS38952.1	5	475	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000078521	Aunip	ENSMUST00000105866	ENSMUSP00000101492	TRANSLATION	protein_coding	-	CCDS51326.1	1	340	0	0	0.5	436.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066141	Gm11232	ENSMUST00000084489	ENSMUSP00000081532	TRANSLATION	protein_coding	-	-	5	295	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000070985	Acnat1	ENSMUST00000107697	ENSMUSP00000103325	TRANSLATION	protein_coding	-	-	5	398	3	3.8	0	384.8	0	-4,-6	-	-	13.998	ALTERNATIVE:2
ENSMUSG00000070985	Acnat1	ENSMUST00000150392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070985	Acnat1	ENSMUST00000095086	ENSMUSP00000092702	TRANSLATION	protein_coding	-	CCDS51174.1	1	416	3	4.3	0.5	384.8	0	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000070985	Acnat1	ENSMUST00000135976	ENSMUSP00000121168	TRANSLATION	protein_coding	stop	-	5	48	0	1	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066151	Fkbp15	ENSMUST00000239461	ENSMUSP00000159322	TRANSLATION	protein_coding	start	-	-	1044	0	1.75	0	55.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066151	Fkbp15	ENSMUST00000107461	ENSMUSP00000103085	TRANSLATION	protein_coding	-	-	1	650	0	2.17	0	69.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000066151	Fkbp15	ENSMUST00000131977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066151	Fkbp15	ENSMUST00000098033	ENSMUSP00000095641	TRANSLATION	protein_coding	-	-	1	644	0	2.17	0	69.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000066151	Fkbp15	ENSMUST00000139308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066151	Fkbp15	ENSMUST00000084527	ENSMUSP00000081575	TRANSLATION	protein_coding	-	CCDS51201.1	1	1216	0	2.17	0.5	69.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000066151	Fkbp15	ENSMUST00000084528	ENSMUSP00000081576	TRANSLATION	protein_coding	-	-	1	756	0	2.17	0	69.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000006442	Srm	ENSMUST00000006611	ENSMUSP00000006611	TRANSLATION	protein_coding	-	CCDS18940.1	1	302	21	6.33	6.3	244.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000006442	Srm	ENSMUST00000152701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006442	Srm	ENSMUST00000140129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000138577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000178134	ENSMUSP00000136222	TRANSLATION	protein_coding	-	CCDS57264.1	5	5582	16	3.6	0.5	384.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000058006	Mdn1	ENSMUST00000149941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000125323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000071642	ENSMUSP00000071569	TRANSLATION	protein_coding	-	-	5	5589	16	3.6	0.5	384.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058006	Mdn1	ENSMUST00000150934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000133403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000124657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000136608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000151626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058006	Mdn1	ENSMUST00000124361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028445	Enho	ENSMUST00000127306	ENSMUSP00000137902	TRANSLATION	protein_coding	-	CCDS59655.1	1	76	0	0	7.5	0	0	1,-4	-	-	3	PRINCIPAL:1
ENSMUSG00000066688	Gm13083	ENSMUST00000105773	ENSMUSP00000101399	TRANSLATION	protein_coding	-	CCDS51355.1	5	501	0	0.46	0.5	0	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093996	Fam205a3	ENSMUST00000178192	ENSMUSP00000137159	TRANSLATION	protein_coding	-	-	5	1308	0	0	0.5	122.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054659	Pm20d2	ENSMUST00000119167	ENSMUSP00000113669	TRANSLATION	protein_coding	-	-	1	305	9	3	0	34.4	0	-4,-5	-	-	11.196	MINOR
ENSMUSG00000054659	Pm20d2	ENSMUST00000098181	ENSMUSP00000095783	TRANSLATION	protein_coding	-	CCDS51136.1	5	431	10	4.62	1.5	66.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028576	Ift74	ENSMUST00000152289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028576	Ift74	ENSMUST00000107104	ENSMUSP00000102721	TRANSLATION	protein_coding	-	CCDS71420.1	2	388	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028576	Ift74	ENSMUST00000030311	ENSMUSP00000030311	TRANSLATION	protein_coding	-	CCDS51232.1	5	600	0	0	7.6	0	0	-4,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000028865	Cd164l2	ENSMUST00000218338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028865	Cd164l2	ENSMUST00000134713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028865	Cd164l2	ENSMUST00000105910	ENSMUSP00000101530	TRANSLATION	protein_coding	-	CCDS38901.1	1	172	0	0	6.3	78.5	0	2,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000028865	Cd164l2	ENSMUST00000218998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028865	Cd164l2	ENSMUST00000126929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028865	Cd164l2	ENSMUST00000150744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096333	Gm13871	ENSMUST00000107318	ENSMUSP00000102939	TRANSLATION	protein_coding	-	-	5	232	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000096333	Gm13871	ENSMUST00000107319	ENSMUSP00000102940	TRANSLATION	protein_coding	-	CCDS51209.1	1	360	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000042380	Smim12	ENSMUST00000142029	ENSMUSP00000131941	TRANSLATION	protein_coding	-	CCDS38883.1	1	92	0	0	17.5	125.3	0	-3,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000028465	Tln1	ENSMUST00000130670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028465	Tln1	ENSMUST00000134623	ENSMUSP00000119956	TRANSLATION	protein_coding	start/stop	-	5	122	0	3.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028465	Tln1	ENSMUST00000123985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028465	Tln1	ENSMUST00000125509	ENSMUSP00000115681	TRANSLATION	protein_coding	start/stop	-	5	279	0	7.16	0	195	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028465	Tln1	ENSMUST00000130353	ENSMUSP00000119441	TRANSLATION	protein_coding	stop	-	5	241	0	5.75	0	246.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028465	Tln1	ENSMUST00000030187	ENSMUSP00000030187	TRANSLATION	protein_coding	-	CCDS18101.1	1	2541	0	57.79	14.8	888	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028465	Tln1	ENSMUST00000127262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028465	Tln1	ENSMUST00000126078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066061	Olfr1335	ENSMUST00000219094	ENSMUSP00000151219	TRANSLATION	protein_coding	-	CCDS18562.1	-	335	0	0.36	0.5	188	6	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000066061	Olfr1335	ENSMUST00000084313	ENSMUSP00000081339	TRANSLATION	protein_coding	-	-	-	319	0	0.36	1.5	188	6	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000049878	Rlf	ENSMUST00000222814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049878	Rlf	ENSMUST00000168615	ENSMUSP00000127068	TRANSLATION	protein_coding	-	-	5	1808	41	0	0.5	33.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000049878	Rlf	ENSMUST00000142647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049878	Rlf	ENSMUST00000056635	ENSMUSP00000050825	TRANSLATION	protein_coding	-	CCDS84789.1	5	1918	41	0	0.5	33.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000058186	Zfp980	ENSMUST00000180014	ENSMUSP00000137589	TRANSLATION	protein_coding	-	CCDS51370.1	2	645	55	1.4	0.5	395.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000058186	Zfp980	ENSMUST00000105738	ENSMUSP00000101364	TRANSLATION	protein_coding	-	CCDS51370.1	1	645	55	1.4	0.5	395.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000073987	Ggh	ENSMUST00000098242	ENSMUSP00000095843	TRANSLATION	protein_coding	-	CCDS51126.1	1	317	9	7.73	0.5	81.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000048232	Fbxo10	ENSMUST00000155583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048232	Fbxo10	ENSMUST00000140008	ENSMUSP00000119862	TRANSLATION	protein_coding	start	-	5	731	0	2.55	0	114.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048232	Fbxo10	ENSMUST00000052236	ENSMUSP00000058233	TRANSLATION	protein_coding	-	CCDS51171.1	1	950	0	2.55	3.9	149.1	0	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000070683	Lactbl1	ENSMUST00000178843	ENSMUSP00000138455	TRANSLATION	protein_coding	-	CCDS59661.1	5	581	0	1.42	0.5	136	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000028684	Urod	ENSMUST00000134598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000153629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028684	Urod	ENSMUST00000139209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000123079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000130273	ENSMUSP00000116154	TRANSLATION	protein_coding	stop	-	3	120	7	2.33	0	58.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028684	Urod	ENSMUST00000139816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000150370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000135164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000127635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028684	Urod	ENSMUST00000030446	ENSMUSP00000030446	TRANSLATION	protein_coding	-	CCDS18521.1	1	367	25	8.66	6.3	445.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043872	Zmym1	ENSMUST00000055013	ENSMUSP00000050669	TRANSLATION	protein_coding	-	CCDS18663.1	2	983	8	0.8	0.5	111.9	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000043872	Zmym1	ENSMUST00000136186	ENSMUSP00000120772	TRANSLATION	protein_coding	stop	-	3	83	4	0.8	0	26	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000043872	Zmym1	ENSMUST00000106099	ENSMUSP00000101705	TRANSLATION	protein_coding	-	-	1	885	8	0.8	0	111.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000043872	Zmym1	ENSMUST00000124429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043872	Zmym1	ENSMUST00000106102	ENSMUSP00000101708	TRANSLATION	protein_coding	-	CCDS18663.1	1	983	8	0.8	0.5	111.9	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000043872	Zmym1	ENSMUST00000152607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043872	Zmym1	ENSMUST00000140605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035561	Aldh1b1	ENSMUST00000044384	ENSMUSP00000041260	TRANSLATION	protein_coding	-	CCDS18139.1	1	519	26	2	1.5	612.3	0	-1,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035561	Aldh1b1	ENSMUST00000172750	ENSMUSP00000134082	TRANSLATION	protein_coding	stop	-	2	131	0	1	0	72.6	0	-1,0	-	-	-1	MINOR
ENSMUSG00000061887	Ssbp3	ENSMUST00000131440	ENSMUSP00000120323	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	59.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061887	Ssbp3	ENSMUST00000133827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000156288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000136487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000030367	ENSMUSP00000030367	TRANSLATION	protein_coding	-	CCDS18427.1	1	388	0	0	10.3	329	0	-4,-7	-	-	9.236	PRINCIPAL:1
ENSMUSG00000061887	Ssbp3	ENSMUST00000150915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000138475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000141963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000124936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000072753	ENSMUSP00000072536	TRANSLATION	protein_coding	-	CCDS18428.1	1	361	0	0	12.5	218.1	0	-4,-7	-	-	4	MINOR
ENSMUSG00000061887	Ssbp3	ENSMUST00000149926	ENSMUSP00000116248	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	153.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061887	Ssbp3	ENSMUST00000146659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000132506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000097934	ENSMUSP00000095547	TRANSLATION	protein_coding	-	-	5	368	0	0	3.2	278.6	0	-4,-7	-	-	3.74	MINOR
ENSMUSG00000061887	Ssbp3	ENSMUST00000148842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000131111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061887	Ssbp3	ENSMUST00000137786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028670	Lypla2	ENSMUST00000145350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028670	Lypla2	ENSMUST00000156948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028670	Lypla2	ENSMUST00000150978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028670	Lypla2	ENSMUST00000105852	ENSMUSP00000101478	TRANSLATION	protein_coding	-	CCDS18797.1	1	231	7	6.33	18.3	298.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028670	Lypla2	ENSMUST00000067567	ENSMUSP00000064204	TRANSLATION	protein_coding	-	CCDS18797.1	1	231	7	6.33	18.3	298.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000036052	Dnajb5	ENSMUST00000107973	ENSMUSP00000103607	TRANSLATION	protein_coding	-	CCDS18084.1	1	348	0	3	9.6	247.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036052	Dnajb5	ENSMUST00000037872	ENSMUSP00000040451	TRANSLATION	protein_coding	-	-	5	382	0	3	4.2	247.9	0	-4,-6	-	-	13.116	MINOR
ENSMUSG00000036052	Dnajb5	ENSMUST00000084662	ENSMUSP00000081712	TRANSLATION	protein_coding	-	CCDS18084.1	1	348	0	3	9.6	247.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036052	Dnajb5	ENSMUST00000123501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036052	Dnajb5	ENSMUST00000142332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036052	Dnajb5	ENSMUST00000153807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036052	Dnajb5	ENSMUST00000098112	ENSMUSP00000095716	TRANSLATION	protein_coding	-	CCDS18084.1	1	348	0	3	9.6	247.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037731	Themis2	ENSMUST00000045154	ENSMUSP00000036945	TRANSLATION	protein_coding	-	CCDS18735.1	1	663	0	0	0.5	243.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028845	Tekt2	ENSMUST00000131113	ENSMUSP00000116659	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	102.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028845	Tekt2	ENSMUST00000102616	ENSMUSP00000099676	TRANSLATION	protein_coding	-	CCDS18651.1	5	430	0	0	7.5	429.7	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028845	Tekt2	ENSMUST00000156139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028845	Tekt2	ENSMUST00000141990	ENSMUSP00000114688	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028845	Tekt2	ENSMUST00000030658	ENSMUSP00000030658	TRANSLATION	protein_coding	-	CCDS18651.1	1	430	0	0	7.5	429.7	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028464	Tpm2	ENSMUST00000107913	ENSMUSP00000103546	TRANSLATION	protein_coding	-	CCDS18100.1	1	284	0	8	19.5	320	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028464	Tpm2	ENSMUST00000133355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028464	Tpm2	ENSMUST00000030184	ENSMUSP00000030184	TRANSLATION	protein_coding	-	-	5	284	0	8	17.5	308.5	0	-4,-5	-	-	14.878	MINOR
ENSMUSG00000028464	Tpm2	ENSMUST00000150592	ENSMUSP00000119908	TRANSLATION	protein_coding	stop	-	3	105	0	2.75	0	81.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028464	Tpm2	ENSMUST00000150262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028464	Tpm2	ENSMUST00000107914	ENSMUSP00000103547	TRANSLATION	protein_coding	-	CCDS71374.1	1	284	0	8	17.5	297.2	0	-4,-5	-	-	14.2	MINOR
ENSMUSG00000046667	Rbm12b1	ENSMUST00000146416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046667	Rbm12b1	ENSMUST00000069128	ENSMUSP00000064195	TRANSLATION	protein_coding	-	CCDS17976.1	1	836	0	0	0.5	81.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046667	Rbm12b1	ENSMUST00000138008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046667	Rbm12b1	ENSMUST00000050069	ENSMUSP00000053555	TRANSLATION	protein_coding	-	CCDS17976.1	1	836	0	0	0.5	81.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045751	Mms22l	ENSMUST00000154349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045751	Mms22l	ENSMUST00000139050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045751	Mms22l	ENSMUST00000050446	ENSMUSP00000057715	TRANSLATION	protein_coding	-	-	1	1198	0	0	0	1238.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045751	Mms22l	ENSMUST00000173079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045751	Mms22l	ENSMUST00000154496	ENSMUSP00000134140	TRANSLATION	protein_coding	start	-	2	101	0	0	0	127.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045751	Mms22l	ENSMUST00000172622	ENSMUSP00000133658	TRANSLATION	protein_coding	start/stop	-	5	323	0	0	0	347.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045751	Mms22l	ENSMUST00000123984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045751	Mms22l	ENSMUST00000108222	ENSMUSP00000103857	TRANSLATION	protein_coding	-	CCDS18006.2	5	1238	0	0	1.5	1713.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045751	Mms22l	ENSMUST00000138567	ENSMUSP00000134736	TRANSLATION	protein_coding	-	-	2	202	0	0	0	286.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045751	Mms22l	ENSMUST00000131282	ENSMUSP00000133800	TRANSLATION	nonsense_mediated_decay	start	-	5	734	0	0	0	982.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037028	Gm12800	ENSMUST00000075999	ENSMUSP00000075380	TRANSLATION	protein_coding	-	-	5	484	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000045672	Col27a1	ENSMUST00000036300	ENSMUSP00000043816	TRANSLATION	protein_coding	-	CCDS18250.1	1	1845	4	27.86	1.5	455.4	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000045672	Col27a1	ENSMUST00000183913	ENSMUSP00000139182	TRANSLATION	nonsense_mediated_decay	start	-	1	448	0	12.23	0	178.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045672	Col27a1	ENSMUST00000125504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045672	Col27a1	ENSMUST00000184067	ENSMUSP00000139173	TRANSLATION	nonsense_mediated_decay	-	-	5	943	0	23.92	0	245.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045672	Col27a1	ENSMUST00000149856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045672	Col27a1	ENSMUST00000151992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045672	Col27a1	ENSMUST00000148751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028527	Ak4	ENSMUST00000151561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028527	Ak4	ENSMUST00000106946	ENSMUSP00000102559	TRANSLATION	protein_coding	-	CCDS18394.1	2	223	21	6.5	10.8	223.2	0	-3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028527	Ak4	ENSMUST00000155749	ENSMUSP00000121112	TRANSLATION	protein_coding	start	-	3	141	13	4.25	0	101.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028527	Ak4	ENSMUST00000102780	ENSMUSP00000099841	TRANSLATION	protein_coding	-	CCDS18394.1	5	223	21	6.5	10.8	223.2	0	-3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028527	Ak4	ENSMUST00000106945	ENSMUSP00000102558	TRANSLATION	protein_coding	-	CCDS18394.1	1	223	21	6.5	10.8	223.2	0	-3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000028527	Ak4	ENSMUST00000133055	ENSMUSP00000115454	TRANSLATION	protein_coding	stop	-	3	123	17	3.25	0	106	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000028527	Ak4	ENSMUST00000131397	ENSMUSP00000115456	TRANSLATION	protein_coding	stop	-	2	115	10	3.25	0	128.7	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000028577	Plaa	ENSMUST00000127656	ENSMUSP00000116530	TRANSLATION	protein_coding	start/stop	-	2	214	0	4.35	0	144.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028577	Plaa	ENSMUST00000129748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028577	Plaa	ENSMUST00000146118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028577	Plaa	ENSMUST00000135696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028577	Plaa	ENSMUST00000136669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028577	Plaa	ENSMUST00000107107	ENSMUSP00000102724	TRANSLATION	protein_coding	-	CCDS18359.1	1	794	3	10.75	7.5	471	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035275	Raver2	ENSMUST00000106955	ENSMUSP00000102568	TRANSLATION	protein_coding	-	-	1	459	0	3.35	0	102.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000035275	Raver2	ENSMUST00000148148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035275	Raver2	ENSMUST00000038463	ENSMUSP00000043142	TRANSLATION	protein_coding	-	CCDS18392.1	1	673	0	3.35	1.5	102.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000035539	Ccdc180	ENSMUST00000178561	ENSMUSP00000136714	TRANSLATION	protein_coding	-	CCDS57275.1	5	1664	0	0	0.5	859.1	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000035539	Ccdc180	ENSMUST00000149903	ENSMUSP00000119784	TRANSLATION	protein_coding	-	-	5	1479	0	0	0	859.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000035539	Ccdc180	ENSMUST00000127261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035539	Ccdc180	ENSMUST00000151024	ENSMUSP00000122332	TRANSLATION	protein_coding	start/stop	-	5	376	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045268	Zfp691	ENSMUST00000179290	ENSMUSP00000136119	TRANSLATION	protein_coding	-	CCDS18570.1	1	283	28	0.8	1.5	179.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045268	Zfp691	ENSMUST00000106355	ENSMUSP00000101962	TRANSLATION	protein_coding	-	CCDS18570.1	1	283	28	0.8	1.5	179.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045268	Zfp691	ENSMUST00000154226	ENSMUSP00000115832	TRANSLATION	protein_coding	stop	-	1	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045268	Zfp691	ENSMUST00000052715	ENSMUSP00000053013	TRANSLATION	protein_coding	-	CCDS18570.1	1	283	28	0.8	1.5	179.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070867	Trabd2b	ENSMUST00000094894	ENSMUSP00000092494	TRANSLATION	protein_coding	-	CCDS38843.1	5	517	0	0	0.5	216.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000035615	Frmpd1	ENSMUST00000107804	ENSMUSP00000103434	TRANSLATION	protein_coding	-	CCDS38753.1	5	1549	0	6.438	0.5	95.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035615	Frmpd1	ENSMUST00000044773	ENSMUSP00000047232	TRANSLATION	protein_coding	-	CCDS38753.1	1	1549	0	6.438	0.5	95.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035615	Frmpd1	ENSMUST00000134280	ENSMUSP00000118757	TRANSLATION	protein_coding	stop	-	3	194	0	2.5	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028832	Stmn1	ENSMUST00000105868	ENSMUSP00000101494	TRANSLATION	protein_coding	-	CCDS18772.1	1	149	0	3.25	10.8	203.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028832	Stmn1	ENSMUST00000130253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028832	Stmn1	ENSMUST00000127279	ENSMUSP00000119547	TRANSLATION	protein_coding	stop	-	5	102	0	2	0	149.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028832	Stmn1	ENSMUST00000030636	ENSMUSP00000030636	TRANSLATION	protein_coding	-	CCDS18772.1	1	149	0	3.25	10.8	203.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028832	Stmn1	ENSMUST00000105867	ENSMUSP00000101493	TRANSLATION	protein_coding	-	-	5	147	0	2.75	0	186.1	0	-4,-5	-	-	9.96	MINOR
ENSMUSG00000040520	Manea	ENSMUST00000140492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040520	Manea	ENSMUST00000153813	ENSMUSP00000115791	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000040520	Manea	ENSMUST00000133105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040520	Manea	ENSMUST00000041374	ENSMUSP00000038671	TRANSLATION	protein_coding	-	CCDS18012.1	1	462	7	2.83	3.9	627.4	0	0,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000039759	Thap3	ENSMUST00000105665	ENSMUSP00000101290	TRANSLATION	protein_coding	-	CCDS51387.1	1	184	5	1.6	0.5	62.1	0	-4,0	-	-	17	ALTERNATIVE:2
ENSMUSG00000039759	Thap3	ENSMUST00000146471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039759	Thap3	ENSMUST00000036680	ENSMUSP00000035240	TRANSLATION	protein_coding	-	CCDS18982.1	1	218	5	1.6	0.5	62.1	0	-4,0	-	-	17	PRINCIPAL:3
ENSMUSG00000060862	Zbtb40	ENSMUST00000145505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060862	Zbtb40	ENSMUST00000049583	ENSMUSP00000061899	TRANSLATION	protein_coding	-	CCDS18814.1	1	1258	48	2.7	1.5	205.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000060862	Zbtb40	ENSMUST00000218160	ENSMUSP00000151856	TRANSLATION	protein_coding	start/stop	-	2	269	33	2.1	0	118.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000082216	Olfr271-ps1	ENSMUST00000121614	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000082216	Olfr271-ps1	ENSMUST00000217546	ENSMUSP00000149048	TRANSLATION	protein_coding	-	-	-	283	0	0.32	0	177.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037443	Cep85	ENSMUST00000137388	ENSMUSP00000125599	TRANSLATION	nonsense_mediated_decay	-	-	3	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037443	Cep85	ENSMUST00000138144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037443	Cep85	ENSMUST00000145531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037443	Cep85	ENSMUST00000141384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037443	Cep85	ENSMUST00000121566	ENSMUSP00000113351	TRANSLATION	protein_coding	-	-	1	759	0	0	3.9	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000037443	Cep85	ENSMUST00000132120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037443	Cep85	ENSMUST00000126014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037443	Cep85	ENSMUST00000040271	ENSMUSP00000039889	TRANSLATION	protein_coding	-	CCDS18765.1	1	761	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:2
ENSMUSG00000037443	Cep85	ENSMUST00000141992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078355	Ifna16	ENSMUST00000105148	ENSMUSP00000100779	TRANSLATION	protein_coding	-	CCDS18325.1	-	189	3	1	3.9	204.6	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000041351	Rap1gap	ENSMUST00000047243	ENSMUSP00000042473	TRANSLATION	protein_coding	-	CCDS38925.1	5	727	0	9.55	5.3	256.5	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000041351	Rap1gap	ENSMUST00000150928	ENSMUSP00000123561	TRANSLATION	protein_coding	stop	-	3	240	0	4.5	0	83.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041351	Rap1gap	ENSMUST00000144059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000152567	ENSMUSP00000115391	TRANSLATION	protein_coding	stop	-	5	165	0	1.3	0	42	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041351	Rap1gap	ENSMUST00000156683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000148054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000131536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041351	Rap1gap	ENSMUST00000105835	ENSMUSP00000101461	TRANSLATION	protein_coding	-	CCDS57306.1	5	729	0	9.55	0.5	256.5	0	-4,-1	-	-	12	MINOR
ENSMUSG00000041351	Rap1gap	ENSMUST00000123011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000139831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041351	Rap1gap	ENSMUST00000141306	ENSMUSP00000122315	TRANSLATION	protein_coding	start/stop	-	5	405	0	3.5	0	107.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041351	Rap1gap	ENSMUST00000123134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000151601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041351	Rap1gap	ENSMUST00000097837	ENSMUSP00000095448	TRANSLATION	protein_coding	-	CCDS84809.1	1	694	0	9.55	0.5	256.5	0	-4,-2	-	-	12	MINOR
ENSMUSG00000028332	Hemgn	ENSMUST00000071096	ENSMUSP00000066383	TRANSLATION	protein_coding	-	CCDS18150.1	1	503	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028332	Hemgn	ENSMUST00000107764	ENSMUSP00000103393	TRANSLATION	protein_coding	-	CCDS18150.1	1	503	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028289	Epha7	ENSMUST00000129029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028289	Epha7	ENSMUST00000136827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028289	Epha7	ENSMUST00000108194	ENSMUSP00000103829	TRANSLATION	protein_coding	-	-	1	626	0	6.45	0.5	346.5	3	3,-2	-	-	0	MINOR
ENSMUSG00000028289	Epha7	ENSMUST00000149030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028289	Epha7	ENSMUST00000029964	ENSMUSP00000029964	TRANSLATION	protein_coding	-	CCDS18013.1	1	998	19	13	8.8	821.6	3	3,-2	-	-	21	PRINCIPAL:3
ENSMUSG00000028289	Epha7	ENSMUST00000108191	ENSMUSP00000103826	TRANSLATION	protein_coding	-	CCDS71353.1	1	994	19	13	8.8	818.1	3	3,-2	-	-	20.79	ALTERNATIVE:1
ENSMUSG00000028289	Epha7	ENSMUST00000129912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028289	Epha7	ENSMUST00000080934	ENSMUSP00000079735	TRANSLATION	protein_coding	-	CCDS51132.1	1	610	0	6.45	8.8	346.5	3	3,-2	-	-	3	MINOR
ENSMUSG00000050989	Selenon	ENSMUST00000060435	ENSMUSP00000060026	TRANSLATION	protein_coding	-	CCDS38917.1	5	557	5	0	0.5	0	0	-1,2	-	-	5	PRINCIPAL:1
ENSMUSG00000050989	Selenon	ENSMUST00000127585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078576	Gm12886	ENSMUST00000106266	ENSMUSP00000101873	TRANSLATION	protein_coding	-	CCDS51295.1	5	119	0	1.1	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000028525	Pde4b	ENSMUST00000133632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028525	Pde4b	ENSMUST00000097950	ENSMUSP00000095562	TRANSLATION	protein_coding	-	CCDS51243.1	1	564	6	9.75	1.7	315.6	0	-4,-6	-	-	12.543	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000106908	ENSMUSP00000102521	TRANSLATION	protein_coding	-	CCDS18403.1	1	721	6	12.58	11.5	315.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000028525	Pde4b	ENSMUST00000106904	ENSMUSP00000102517	TRANSLATION	protein_coding	-	-	5	659	6	12.58	0.5	315.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000106907	ENSMUSP00000102520	TRANSLATION	protein_coding	-	CCDS57289.1	1	212	0	2.83	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000172845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028525	Pde4b	ENSMUST00000030251	ENSMUSP00000030251	TRANSLATION	protein_coding	-	CCDS51245.1	1	484	6	8.75	1.7	315.6	0	-4,-5	-	-	12.201	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000174186	ENSMUSP00000134690	TRANSLATION	nonsense_mediated_decay	start	-	5	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000172616	ENSMUSP00000134340	TRANSLATION	protein_coding	-	-	5	161	0	2.83	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000106911	ENSMUSP00000102524	TRANSLATION	protein_coding	-	-	5	736	6	12.58	9.3	315.6	0	-4,-5	-	-	20.37	ALTERNATIVE:1
ENSMUSG00000028525	Pde4b	ENSMUST00000173119	ENSMUSP00000133413	TRANSLATION	nonsense_mediated_decay	-	-	1	166	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000106901	ENSMUSP00000102514	TRANSLATION	protein_coding	-	-	2	402	6	7.96	0	276	0	-4,-6	-	-	9.624	MINOR
ENSMUSG00000028525	Pde4b	ENSMUST00000097949	ENSMUSP00000095561	TRANSLATION	protein_coding	-	CCDS51244.1	1	503	6	8.75	11.5	315.6	0	-4,-6	-	-	15	MINOR
ENSMUSG00000066090	Insl5	ENSMUST00000084382	ENSMUSP00000081416	TRANSLATION	protein_coding	-	CCDS18406.1	1	135	0	0	0.5	31	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000066090	Insl5	ENSMUST00000106869	ENSMUSP00000102482	TRANSLATION	protein_coding	-	CCDS71431.1	1	145	0	0	0.5	31	0	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000040842	Szrd1	ENSMUST00000148204	ENSMUSP00000115949	TRANSLATION	protein_coding	start	-	2	146	0	0	0	88.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040842	Szrd1	ENSMUST00000039939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040842	Szrd1	ENSMUST00000102487	ENSMUSP00000099545	TRANSLATION	protein_coding	-	CCDS18864.1	1	152	0	0	13	88.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040842	Szrd1	ENSMUST00000128444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040842	Szrd1	ENSMUST00000094549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054405	Dnajc8	ENSMUST00000105938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054405	Dnajc8	ENSMUST00000105937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054405	Dnajc8	ENSMUST00000156385	ENSMUSP00000125885	TRANSLATION	protein_coding	start	-	3	95	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000067467	ENSMUSP00000068069	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000142281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054405	Dnajc8	ENSMUST00000139074	ENSMUSP00000122099	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000094657	ENSMUSP00000092242	TRANSLATION	protein_coding	-	CCDS51319.1	1	253	0	2.546	13.7	60.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000054405	Dnajc8	ENSMUST00000144073	ENSMUSP00000131575	TRANSLATION	nonsense_mediated_decay	-	-	2	61	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000105939	ENSMUSP00000101559	TRANSLATION	protein_coding	-	-	5	219	0	2.546	0	58.9	0	-4,-5	-	-	11.802	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000138334	ENSMUSP00000130135	TRANSLATION	nonsense_mediated_decay	start	-	5	84	0	1.58	0	45.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000150207	ENSMUSP00000121009	TRANSLATION	protein_coding	start	-	5	244	0	2.216	0	60.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054405	Dnajc8	ENSMUST00000105940	ENSMUSP00000101560	TRANSLATION	protein_coding	-	-	5	234	0	2.046	0	31	0	-4,-5	-	-	7.878	MINOR
ENSMUSG00000028946	Hes3	ENSMUST00000094438	ENSMUSP00000092006	TRANSLATION	protein_coding	-	CCDS18997.1	1	175	0	1.35	1.5	44	0	-4,-1	-	-	10.116	MINOR
ENSMUSG00000028946	Hes3	ENSMUST00000218045	ENSMUSP00000151815	TRANSLATION	protein_coding	-	-	5	200	0	1.8	0.5	47	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028492	Saxo1	ENSMUST00000133793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028492	Saxo1	ENSMUST00000030216	ENSMUSP00000030216	TRANSLATION	protein_coding	-	CCDS38795.1	1	476	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000028492	Saxo1	ENSMUST00000151481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028492	Saxo1	ENSMUST00000139694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028811	Yars	ENSMUST00000140708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028811	Yars	ENSMUST00000146106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028811	Yars	ENSMUST00000148619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028811	Yars	ENSMUST00000137591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028811	Yars	ENSMUST00000133992	ENSMUSP00000118512	TRANSLATION	nonsense_mediated_decay	start	-	5	129	2	1	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028811	Yars	ENSMUST00000106054	ENSMUSP00000101669	TRANSLATION	protein_coding	-	-	1	528	14	12.25	10.3	368.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028811	Yars	ENSMUST00000128287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028811	Yars	ENSMUST00000147248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033948	Zswim5	ENSMUST00000044823	ENSMUSP00000049474	TRANSLATION	protein_coding	-	CCDS18520.1	1	1188	0	0	2.9	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000040455	Usp45	ENSMUST00000040429	ENSMUSP00000048324	TRANSLATION	protein_coding	-	CCDS71351.1	1	765	16	7.921	1.5	218	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040455	Usp45	ENSMUST00000065111	ENSMUSP00000067109	TRANSLATION	protein_coding	-	CCDS38700.1	5	813	16	7.921	1.5	217.4	0	-4,-5	-	-	17.964	PRINCIPAL:3
ENSMUSG00000040455	Usp45	ENSMUST00000137293	ENSMUSP00000125982	TRANSLATION	nonsense_mediated_decay	start	-	5	210	12	3.208	0	64	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040455	Usp45	ENSMUST00000148304	ENSMUSP00000127194	TRANSLATION	protein_coding	stop	-	3	257	12	3.298	0	64	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040455	Usp45	ENSMUST00000125262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040455	Usp45	ENSMUST00000108232	ENSMUSP00000103867	TRANSLATION	nonsense_mediated_decay	-	-	1	813	16	7.921	1.5	217.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040455	Usp45	ENSMUST00000148647	ENSMUSP00000128859	TRANSLATION	nonsense_mediated_decay	start	-	5	153	0	1.82	0	27.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040455	Usp45	ENSMUST00000156589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006390	Elovl1	ENSMUST00000143140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006390	Elovl1	ENSMUST00000102673	ENSMUSP00000099734	TRANSLATION	protein_coding	-	CCDS18550.1	1	202	0	0	0.5	167.9	4	-4,-7	-	-	3.06	MINOR
ENSMUSG00000006390	Elovl1	ENSMUST00000067896	ENSMUSP00000064816	TRANSLATION	protein_coding	-	CCDS18549.1	1	279	0	0	8.8	216.9	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000006390	Elovl1	ENSMUST00000006557	ENSMUSP00000006557	TRANSLATION	protein_coding	-	CCDS18549.1	1	279	0	0	8.8	216.9	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000006390	Elovl1	ENSMUST00000135162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006390	Elovl1	ENSMUST00000129419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006390	Elovl1	ENSMUST00000167636	ENSMUSP00000126685	TRANSLATION	protein_coding	-	CCDS18549.1	1	279	0	0	8.8	216.9	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000028851	Nudc	ENSMUST00000148612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028851	Nudc	ENSMUST00000141860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028851	Nudc	ENSMUST00000030665	ENSMUSP00000030665	TRANSLATION	protein_coding	-	CCDS18750.1	1	332	0	2.95	6.3	185.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000036921	Tex46	ENSMUST00000046647	ENSMUSP00000038976	TRANSLATION	protein_coding	-	CCDS18808.1	1	165	0	0	1.7	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028950	Tas1r1	ENSMUST00000030792	ENSMUSP00000030792	TRANSLATION	protein_coding	-	CCDS18985.1	1	842	7	3.52	2.7	403.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000050966	Lin28a	ENSMUST00000051674	ENSMUSP00000050488	TRANSLATION	protein_coding	-	CCDS18761.1	1	209	8	5	7.6	84.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000050966	Lin28a	ENSMUST00000176113	ENSMUSP00000135254	TRANSLATION	protein_coding	stop	-	5	83	4	2.25	0	48.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050966	Lin28a	ENSMUST00000176292	ENSMUSP00000135608	TRANSLATION	protein_coding	stop	-	2	81	4	2.25	0	48.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050966	Lin28a	ENSMUST00000176897	ENSMUSP00000135736	TRANSLATION	protein_coding	stop	-	2	75	0	1.75	0	47.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000028470	Hint2	ENSMUST00000151514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028470	Hint2	ENSMUST00000130593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028470	Hint2	ENSMUST00000134082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028470	Hint2	ENSMUST00000030192	ENSMUSP00000030192	TRANSLATION	protein_coding	-	CCDS18106.1	1	163	15	3.65	2.7	96.5	0	1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000028470	Hint2	ENSMUST00000155985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028470	Hint2	ENSMUST00000151238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028470	Hint2	ENSMUST00000134050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059423	Zfp933	ENSMUST00000135798	ENSMUSP00000118300	TRANSLATION	protein_coding	stop	-	1	98	3	2.1	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059423	Zfp933	ENSMUST00000105718	ENSMUSP00000101343	TRANSLATION	protein_coding	-	CCDS38963.1	1	468	51	2.7	1.5	328.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001604	Tcea3	ENSMUST00000136812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001604	Tcea3	ENSMUST00000102533	ENSMUSP00000099592	TRANSLATION	protein_coding	-	CCDS18803.1	1	347	4	7.38	3.9	248.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000001604	Tcea3	ENSMUST00000143942	ENSMUSP00000122718	TRANSLATION	protein_coding	stop	-	3	183	0	2.755	0	50.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108127	Gm12845	ENSMUST00000203629	ENSMUSP00000144740	TRANSLATION	protein_coding	-	-	5	588	11	1	0	40.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000108127	Gm12845	ENSMUST00000204276	ENSMUSP00000144831	TRANSLATION	protein_coding	start/stop	-	5	477	11	1	0	40.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028451	1700022I11Rik	ENSMUST00000190902	ENSMUSP00000140363	TRANSLATION	protein_coding	stop	-	5	237	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028451	1700022I11Rik	ENSMUST00000139127	ENSMUSP00000116415	TRANSLATION	nonsense_mediated_decay	-	-	2	78	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028451	1700022I11Rik	ENSMUST00000030163	ENSMUSP00000030163	TRANSLATION	protein_coding	-	CCDS51160.1	1	1183	2	0	0.5	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000028451	1700022I11Rik	ENSMUST00000189414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028451	1700022I11Rik	ENSMUST00000185904	ENSMUSP00000140492	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071014	Ndufb6	ENSMUST00000108108	ENSMUSP00000103743	TRANSLATION	protein_coding	-	-	3	97	0	2.25	0	71	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000071014	Ndufb6	ENSMUST00000095128	ENSMUSP00000092746	TRANSLATION	protein_coding	-	CCDS18045.1	1	128	0	3.25	9.1	175	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000037692	Ahdc1	ENSMUST00000156677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000154646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000145682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000105914	ENSMUSP00000101534	TRANSLATION	protein_coding	-	CCDS38900.1	5	1594	0	0	0.5	43.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037692	Ahdc1	ENSMUST00000148518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000105916	ENSMUSP00000101536	TRANSLATION	protein_coding	-	CCDS38900.1	5	1594	0	0	0.5	43.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037692	Ahdc1	ENSMUST00000142524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000105915	ENSMUSP00000101535	TRANSLATION	protein_coding	-	CCDS38900.1	1	1594	0	0	0.5	43.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037692	Ahdc1	ENSMUST00000135548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000154482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037692	Ahdc1	ENSMUST00000044521	ENSMUSP00000047113	TRANSLATION	protein_coding	-	CCDS38900.1	1	1594	0	0	0.5	43.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000078773	Rad54b	ENSMUST00000179498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078773	Rad54b	ENSMUST00000108306	ENSMUSP00000103942	TRANSLATION	protein_coding	-	-	3	93	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078773	Rad54b	ENSMUST00000179731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078773	Rad54b	ENSMUST00000070755	ENSMUSP00000066977	TRANSLATION	protein_coding	-	CCDS17970.1	1	886	8	8.168	1.5	255.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000078773	Rad54b	ENSMUST00000178725	ENSMUSP00000136561	TRANSLATION	nonsense_mediated_decay	start	-	5	156	8	2.098	0	63.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078773	Rad54b	ENSMUST00000095145	ENSMUSP00000092767	TRANSLATION	protein_coding	-	CCDS57262.1	1	98	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078773	Rad54b	ENSMUST00000144499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028646	Rragc	ENSMUST00000133445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028646	Rragc	ENSMUST00000155454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028646	Rragc	ENSMUST00000030399	ENSMUSP00000030399	TRANSLATION	protein_coding	-	CCDS18622.1	1	398	19	5.06	1.5	247.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028646	Rragc	ENSMUST00000155757	ENSMUSP00000115232	TRANSLATION	nonsense_mediated_decay	-	-	1	182	16	1.6	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028646	Rragc	ENSMUST00000143635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095409	Gm13043	ENSMUST00000178489	ENSMUSP00000137329	TRANSLATION	protein_coding	-	CCDS18891.1	1	481	0	0	1.5	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000048003	Catsper4	ENSMUST00000130984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048003	Catsper4	ENSMUST00000105878	ENSMUSP00000101504	TRANSLATION	protein_coding	-	-	1	136	0	0.6	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000048003	Catsper4	ENSMUST00000169381	ENSMUSP00000131094	TRANSLATION	protein_coding	-	CCDS51324.1	1	369	0	2.42	0.5	48.5	3	-4,-5	-	-	5.376	MINOR
ENSMUSG00000048003	Catsper4	ENSMUST00000055892	ENSMUSP00000051694	TRANSLATION	protein_coding	-	CCDS18766.1	1	442	0	3.86	0.5	110.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028693	Nasp	ENSMUST00000148436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028693	Nasp	ENSMUST00000081182	ENSMUSP00000079946	TRANSLATION	protein_coding	-	CCDS71451.1	1	421	0	0	0.5	64	0	-1,-3	-	-	6	MINOR
ENSMUSG00000028693	Nasp	ENSMUST00000155398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028693	Nasp	ENSMUST00000134038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028693	Nasp	ENSMUST00000154811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028693	Nasp	ENSMUST00000130363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028693	Nasp	ENSMUST00000030456	ENSMUSP00000030456	TRANSLATION	protein_coding	-	CCDS18513.1	1	773	0	0	1.5	64	0	-1,-3	-	-	6.231	MINOR
ENSMUSG00000028693	Nasp	ENSMUST00000030457	ENSMUSP00000030457	TRANSLATION	protein_coding	-	CCDS38852.1	1	448	0	0	7.5	64	0	-1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000035637	Grhpr	ENSMUST00000151148	ENSMUSP00000120254	TRANSLATION	protein_coding	stop	-	5	222	24	6.58	0	213.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035637	Grhpr	ENSMUST00000045078	ENSMUSP00000047218	TRANSLATION	protein_coding	-	CCDS18128.1	1	328	28	9.74	7.5	287.5	0	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035637	Grhpr	ENSMUST00000151631	ENSMUSP00000117800	TRANSLATION	nonsense_mediated_decay	-	-	5	197	15	5.91	0	137.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035637	Grhpr	ENSMUST00000128973	ENSMUSP00000120061	TRANSLATION	protein_coding	stop	-	5	58	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035637	Grhpr	ENSMUST00000150394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035637	Grhpr	ENSMUST00000143589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000128204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000130237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000139788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000141108	ENSMUSP00000122269	TRANSLATION	protein_coding	start/stop	-	5	375	0	6.8	0	84.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029060	Mib2	ENSMUST00000103176	ENSMUSP00000099465	TRANSLATION	protein_coding	-	CCDS19035.1	1	921	0	11.69	3.9	412.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000029060	Mib2	ENSMUST00000155189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000151843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000139289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029060	Mib2	ENSMUST00000139134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095386	Gm17662	ENSMUST00000179793	ENSMUSP00000137255	TRANSLATION	protein_coding	start/stop	-	5	8	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000041805	Pramel1	ENSMUST00000037419	ENSMUSP00000043718	TRANSLATION	protein_coding	-	CCDS18888.1	1	458	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095341	Gm428	ENSMUST00000084475	ENSMUSP00000081515	TRANSLATION	protein_coding	-	CCDS38785.1	1	360	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028373	Astn2	ENSMUST00000084496	ENSMUSP00000081540	TRANSLATION	protein_coding	-	CCDS18268.1	5	1300	0	11	0.5	69.9	1	-1,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028373	Astn2	ENSMUST00000068214	ENSMUSP00000065786	TRANSLATION	protein_coding	-	CCDS18269.1	5	1352	0	11	0.5	69.9	1	-1,1	-	-	12	PRINCIPAL:4
ENSMUSG00000028603	Scp2	ENSMUST00000135379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028603	Scp2	ENSMUST00000122878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028603	Scp2	ENSMUST00000149106	ENSMUSP00000121673	TRANSLATION	protein_coding	stop	-	5	231	0	4.762	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028603	Scp2	ENSMUST00000130776	ENSMUSP00000123630	TRANSLATION	protein_coding	stop	-	3	110	0	2.18	0	52.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028603	Scp2	ENSMUST00000145721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028603	Scp2	ENSMUST00000143340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028603	Scp2	ENSMUST00000123792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028603	Scp2	ENSMUST00000106701	ENSMUSP00000102312	TRANSLATION	protein_coding	-	-	1	143	0	3.75	1.2	106.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000028603	Scp2	ENSMUST00000030340	ENSMUSP00000030340	TRANSLATION	protein_coding	-	CCDS18446.1	1	547	0	12.112	2.7	231.4	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000048706	Lurap1l	ENSMUST00000055922	ENSMUSP00000062628	TRANSLATION	protein_coding	-	CCDS18291.1	1	221	0	0	1.5	177	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000001333	Sync	ENSMUST00000102599	ENSMUSP00000099659	TRANSLATION	protein_coding	-	CCDS18687.1	1	470	0	0	1.5	54.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000001333	Sync	ENSMUST00000146448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028795	Ccdc28b	ENSMUST00000141361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028795	Ccdc28b	ENSMUST00000106035	ENSMUSP00000101652	TRANSLATION	protein_coding	-	-	1	205	0	0	0	97.6	0	-4,-7	-	-	5.136	MINOR
ENSMUSG00000028795	Ccdc28b	ENSMUST00000150357	ENSMUSP00000118241	TRANSLATION	protein_coding	stop	-	3	104	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028795	Ccdc28b	ENSMUST00000151838	ENSMUSP00000122229	TRANSLATION	nonsense_mediated_decay	-	-	3	149	0	0	0	36.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028795	Ccdc28b	ENSMUST00000152290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028795	Ccdc28b	ENSMUST00000123943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028795	Ccdc28b	ENSMUST00000030586	ENSMUSP00000030586	TRANSLATION	protein_coding	-	CCDS18700.1	1	200	0	0	5.1	112	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000028795	Ccdc28b	ENSMUST00000126777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028795	Ccdc28b	ENSMUST00000124630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028795	Ccdc28b	ENSMUST00000152708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028549	Itgb3bp	ENSMUST00000123045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028549	Itgb3bp	ENSMUST00000123830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028549	Itgb3bp	ENSMUST00000146739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028549	Itgb3bp	ENSMUST00000102786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028549	Itgb3bp	ENSMUST00000146258	ENSMUSP00000117153	TRANSLATION	protein_coding	-	CCDS18387.1	1	176	0	0	1.5	202.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028911	Srsf4	ENSMUST00000030743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028911	Srsf4	ENSMUST00000134943	ENSMUSP00000142148	TRANSLATION	nonsense_mediated_decay	start	-	5	31	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028911	Srsf4	ENSMUST00000053819	ENSMUSP00000061474	TRANSLATION	protein_coding	-	CCDS51315.1	1	491	0	3.6	0.5	105.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028911	Srsf4	ENSMUST00000129966	ENSMUSP00000141468	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045083	Lingo2	ENSMUST00000164772	ENSMUSP00000130423	TRANSLATION	protein_coding	-	CCDS18040.1	1	606	0	1	12.8	180.2	1	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045083	Lingo2	ENSMUST00000127372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045083	Lingo2	ENSMUST00000125128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045083	Lingo2	ENSMUST00000108122	ENSMUSP00000103757	TRANSLATION	protein_coding	-	CCDS18040.1	1	606	0	1	12.8	180.2	1	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045083	Lingo2	ENSMUST00000098151	ENSMUSP00000095754	TRANSLATION	protein_coding	-	CCDS18040.1	5	606	0	1	12.8	180.2	1	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045083	Lingo2	ENSMUST00000108124	ENSMUSP00000103759	TRANSLATION	protein_coding	-	CCDS18040.1	1	606	0	1	12.8	180.2	1	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045083	Lingo2	ENSMUST00000144170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045083	Lingo2	ENSMUST00000124999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045083	Lingo2	ENSMUST00000145615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045083	Lingo2	ENSMUST00000065173	ENSMUSP00000069772	TRANSLATION	protein_coding	-	CCDS18040.1	1	606	0	1	12.8	180.2	1	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000028825	Rhd	ENSMUST00000030627	ENSMUSP00000030627	TRANSLATION	protein_coding	-	CCDS18778.1	1	418	0	5.186	0.5	163	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028825	Rhd	ENSMUST00000136163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048686	Hmgb4	ENSMUST00000053830	ENSMUSP00000059625	TRANSLATION	protein_coding	-	CCDS18671.1	-	181	0	0.8	0.5	133.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050390	C77080	ENSMUST00000106051	ENSMUSP00000101666	TRANSLATION	protein_coding	-	CCDS71474.1	1	1013	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000050390	C77080	ENSMUST00000097873	ENSMUSP00000095483	TRANSLATION	protein_coding	-	CCDS71475.1	1	1025	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000050390	C77080	ENSMUST00000145261	ENSMUSP00000123245	TRANSLATION	protein_coding	stop	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050390	C77080	ENSMUST00000052602	ENSMUSP00000062395	TRANSLATION	protein_coding	-	CCDS18686.1	1	1070	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000050390	C77080	ENSMUST00000146376	ENSMUSP00000122247	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028522	Mier1	ENSMUST00000144219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000106855	ENSMUSP00000102468	TRANSLATION	protein_coding	-	-	1	330	4	2.5	0	63.3	0	-4,-5	-	-	15.796	ALTERNATIVE:2
ENSMUSG00000028522	Mier1	ENSMUST00000136092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000149259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000137348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000147491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000128536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028522	Mier1	ENSMUST00000030247	ENSMUSP00000030247	TRANSLATION	protein_coding	-	CCDS18408.1	1	528	4	2.5	1.7	65.5	0	-2,-4	-	-	16	PRINCIPAL:3
ENSMUSG00000028522	Mier1	ENSMUST00000134533	ENSMUSP00000123637	TRANSLATION	protein_coding	stop	-	5	28	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000028522	Mier1	ENSMUST00000124348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028522	Mier1	ENSMUST00000143417	ENSMUSP00000121587	TRANSLATION	protein_coding	stop	-	3	15	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000028522	Mier1	ENSMUST00000106857	ENSMUSP00000102470	TRANSLATION	protein_coding	-	CCDS38825.1	1	511	4	2.5	1.7	65.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000028522	Mier1	ENSMUST00000151588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028522	Mier1	ENSMUST00000106858	ENSMUSP00000102471	TRANSLATION	protein_coding	-	CCDS18408.1	1	528	4	2.5	1.7	65.5	0	-2,-4	-	-	16	PRINCIPAL:3
ENSMUSG00000028522	Mier1	ENSMUST00000097945	ENSMUSP00000095558	TRANSLATION	protein_coding	-	CCDS71432.1	1	556	4	2.5	0.5	65.5	0	0,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000068240	Gm11808	ENSMUST00000089430	ENSMUSP00000086852	TRANSLATION	protein_coding	-	-	-	128	4	1	17.5	230.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041143	Tmco4	ENSMUST00000043042	ENSMUSP00000041388	TRANSLATION	protein_coding	-	CCDS18837.1	1	631	0	0	1.5	482.5	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041143	Tmco4	ENSMUST00000050949	ENSMUSP00000059320	TRANSLATION	protein_coding	-	CCDS18837.1	1	631	0	0	1.5	482.5	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041143	Tmco4	ENSMUST00000123636	ENSMUSP00000122817	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041143	Tmco4	ENSMUST00000124835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028917	Plekhm2	ENSMUST00000150229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028917	Plekhm2	ENSMUST00000030751	ENSMUSP00000030751	TRANSLATION	protein_coding	-	CCDS84816.1	1	1013	0	4.19	0.5	93.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028917	Plekhm2	ENSMUST00000140223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028917	Plekhm2	ENSMUST00000141844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028917	Plekhm2	ENSMUST00000084203	ENSMUSP00000081221	TRANSLATION	protein_coding	-	CCDS51348.1	5	1033	0	4.19	1.5	93.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028917	Plekhm2	ENSMUST00000136102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048485	Zbtb8b	ENSMUST00000124364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048485	Zbtb8b	ENSMUST00000106046	ENSMUSP00000101661	TRANSLATION	protein_coding	-	-	1	517	8	1.2	1.5	148.5	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000048485	Zbtb8b	ENSMUST00000053042	ENSMUSP00000058157	TRANSLATION	protein_coding	-	CCDS18691.1	1	484	8	1	1.5	148.5	0	-4,-5	-	-	16.998	PRINCIPAL:2
ENSMUSG00000048485	Zbtb8b	ENSMUST00000132556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073791	Efcab7	ENSMUST00000136874	ENSMUSP00000118989	TRANSLATION	protein_coding	start	-	2	466	4	0.84	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073791	Efcab7	ENSMUST00000143994	ENSMUSP00000138530	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073791	Efcab7	ENSMUST00000097959	ENSMUSP00000095572	TRANSLATION	protein_coding	-	-	5	570	4	0.84	0	0	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000073791	Efcab7	ENSMUST00000124547	ENSMUSP00000138452	TRANSLATION	protein_coding	stop	-	2	62	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073791	Efcab7	ENSMUST00000106994	ENSMUSP00000102607	TRANSLATION	protein_coding	stop	-	2	62	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061540	Orm2	ENSMUST00000075341	ENSMUSP00000074810	TRANSLATION	protein_coding	-	CCDS18253.1	1	207	0	4.325	0.5	76.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039546	Ajap1	ENSMUST00000105646	ENSMUSP00000101271	TRANSLATION	protein_coding	-	CCDS38987.1	5	412	0	0	0.5	319.2	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000039546	Ajap1	ENSMUST00000149177	ENSMUSP00000116651	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028859	Csf3r	ENSMUST00000106162	ENSMUSP00000101768	TRANSLATION	protein_coding	-	CCDS18640.1	1	837	0	8.02	0.5	120	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028859	Csf3r	ENSMUST00000030673	ENSMUSP00000030673	TRANSLATION	protein_coding	-	CCDS18640.1	5	837	0	8.02	0.5	120	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028859	Csf3r	ENSMUST00000140426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028859	Csf3r	ENSMUST00000153968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028677	Rnf220	ENSMUST00000102690	ENSMUSP00000099751	TRANSLATION	protein_coding	-	CCDS80149.1	1	245	8	0	1.5	217.9	0	-4,-5	-	-	6.144	MINOR
ENSMUSG00000028677	Rnf220	ENSMUST00000223182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000221654	ENSMUSP00000152367	TRANSLATION	protein_coding	-	-	1	308	8	0	2.7	284.2	0	-4,-2	-	-	9.36	MINOR
ENSMUSG00000028677	Rnf220	ENSMUST00000221157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000151829	ENSMUSP00000152638	TRANSLATION	protein_coding	start	-	3	188	0	0	0	151.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028677	Rnf220	ENSMUST00000128122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028677	Rnf220	ENSMUST00000150148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000030439	ENSMUSP00000030439	TRANSLATION	protein_coding	-	CCDS18534.1	1	566	8	0	11.5	214.7	0	-4,-5	-	-	9	MINOR
ENSMUSG00000028677	Rnf220	ENSMUST00000154974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000223371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000123222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028677	Rnf220	ENSMUST00000133971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028677	Rnf220	ENSMUST00000094853	ENSMUSP00000092449	TRANSLATION	protein_coding	-	CCDS80150.1	1	353	8	0	1.7	336.3	0	-4,-5	-	-	12.201	PRINCIPAL:1
ENSMUSG00000028677	Rnf220	ENSMUST00000138435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028487	Bnc2	ENSMUST00000176346	ENSMUSP00000134942	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176418	ENSMUSP00000135569	TRANSLATION	protein_coding	stop	-	5	405	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176370	ENSMUSP00000134953	TRANSLATION	protein_coding	stop	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000175969	ENSMUSP00000135656	TRANSLATION	protein_coding	stop	-	5	181	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000177256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028487	Bnc2	ENSMUST00000176947	ENSMUSP00000135411	TRANSLATION	protein_coding	stop	-	5	237	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000175756	ENSMUSP00000135499	TRANSLATION	protein_coding	stop	-	5	87	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176702	ENSMUSP00000134774	TRANSLATION	protein_coding	start/stop	-	5	241	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028487	Bnc2	ENSMUST00000176971	ENSMUSP00000135607	TRANSLATION	protein_coding	start	-	5	239	8	0	0	17.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176691	ENSMUSP00000135375	TRANSLATION	protein_coding	-	CCDS18301.2	1	1032	22	0	0.5	34.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000028487	Bnc2	ENSMUST00000102820	ENSMUSP00000099884	TRANSLATION	protein_coding	-	-	5	1127	22	0	2.2	34.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000028487	Bnc2	ENSMUST00000176998	ENSMUSP00000135283	TRANSLATION	protein_coding	start	-	5	82	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000175757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028487	Bnc2	ENSMUST00000177277	ENSMUSP00000135580	TRANSLATION	protein_coding	start	-	5	85	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000123276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028487	Bnc2	ENSMUST00000177040	ENSMUSP00000135089	TRANSLATION	protein_coding	start	-	5	126	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176601	ENSMUSP00000135480	TRANSLATION	protein_coding	start	-	5	86	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000175800	ENSMUSP00000134795	TRANSLATION	protein_coding	stop	-	5	294	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176612	ENSMUSP00000135778	TRANSLATION	protein_coding	-	-	5	861	14	0	1.2	17.3	0	-4,-5	-	-	3.648	MINOR
ENSMUSG00000028487	Bnc2	ENSMUST00000176264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028487	Bnc2	ENSMUST00000107198	ENSMUSP00000102816	TRANSLATION	protein_coding	-	-	5	1099	22	0	2.4	34.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000039137	Whrn	ENSMUST00000140720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039137	Whrn	ENSMUST00000145630	ENSMUSP00000116387	TRANSLATION	nonsense_mediated_decay	start	-	1	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000155058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039137	Whrn	ENSMUST00000144965	ENSMUSP00000121944	TRANSLATION	protein_coding	start	-	3	74	0	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000102867	ENSMUSP00000099931	TRANSLATION	protein_coding	-	CCDS18256.1	1	906	0	7.24	0.5	158.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039137	Whrn	ENSMUST00000124016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039137	Whrn	ENSMUST00000133425	ENSMUSP00000119280	TRANSLATION	protein_coding	start	-	1	164	0	4	0	54.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000095037	ENSMUSP00000092647	TRANSLATION	protein_coding	-	-	1	404	0	2	0	33	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000063650	ENSMUSP00000069664	TRANSLATION	protein_coding	-	CCDS18257.1	1	907	0	7.24	0.5	158.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039137	Whrn	ENSMUST00000119294	ENSMUSP00000114030	TRANSLATION	protein_coding	-	-	1	465	0	2	0	33	0	-4,-7	-	-	0	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000107393	ENSMUSP00000103016	TRANSLATION	protein_coding	-	CCDS38778.1	1	911	0	7.24	0.5	158.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039137	Whrn	ENSMUST00000063672	ENSMUSP00000065838	TRANSLATION	protein_coding	-	-	1	571	0	5.24	0	125.1	0	-4,-7	-	-	6.018	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000148957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039137	Whrn	ENSMUST00000084510	ENSMUSP00000081557	TRANSLATION	protein_coding	-	CCDS18255.1	1	918	0	7.24	0.5	158.1	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000039137	Whrn	ENSMUST00000145133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039137	Whrn	ENSMUST00000095038	ENSMUSP00000092648	TRANSLATION	protein_coding	-	-	1	476	0	2	0	33	0	-4,-7	-	-	0	MINOR
ENSMUSG00000039137	Whrn	ENSMUST00000153307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028645	Slc2a1	ENSMUST00000208090	ENSMUSP00000146958	TRANSLATION	protein_coding	stop	-	5	116	0	2.66	0	108.4	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000028645	Slc2a1	ENSMUST00000134105	ENSMUSP00000118641	TRANSLATION	protein_coding	stop	-	2	140	0	3.41	0	129.1	8	-2,-5	-	-	-1	MINOR
ENSMUSG00000028645	Slc2a1	ENSMUST00000174372	ENSMUSP00000134714	TRANSLATION	nonsense_mediated_decay	-	-	5	173	0	4.49	0	174.7	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000028645	Slc2a1	ENSMUST00000144329	ENSMUSP00000134126	TRANSLATION	protein_coding	stop	-	3	123	0	2.75	0	117.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000028645	Slc2a1	ENSMUST00000030398	ENSMUSP00000030398	TRANSLATION	protein_coding	-	CCDS18569.1	1	492	0	10.49	10.8	542.8	17	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028602	Tnfrsf8	ENSMUST00000030339	ENSMUSP00000030339	TRANSLATION	protein_coding	-	CCDS18915.1	1	498	0	1.96	0.5	25.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028602	Tnfrsf8	ENSMUST00000123027	ENSMUSP00000118714	TRANSLATION	nonsense_mediated_decay	-	-	1	322	0	1.96	0	25.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000043698	Olfr62	ENSMUST00000213189	ENSMUSP00000149043	TRANSLATION	protein_coding	-	CCDS18556.1	5	315	0	0.42	2.7	179.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043698	Olfr62	ENSMUST00000217013	ENSMUSP00000149687	TRANSLATION	protein_coding	-	CCDS18556.1	5	315	0	0.42	2.7	179.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043698	Olfr62	ENSMUST00000102666	ENSMUSP00000099727	TRANSLATION	protein_coding	-	CCDS18556.1	-	315	0	0.42	2.7	179.5	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028707	Dmbx1	ENSMUST00000124071	ENSMUSP00000120320	TRANSLATION	protein_coding	-	CCDS18500.1	1	376	0	1.2	5.1	101.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028707	Dmbx1	ENSMUST00000064806	ENSMUSP00000134457	TRANSLATION	protein_coding	-	CCDS18500.1	1	376	0	1.2	5.1	101.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028707	Dmbx1	ENSMUST00000084338	ENSMUSP00000081366	TRANSLATION	protein_coding	-	-	1	381	0	1.2	1.7	101.4	0	-4,-7	-	-	12.342	MINOR
ENSMUSG00000078597	Cyp4a12b	ENSMUST00000094887	ENSMUSP00000092487	TRANSLATION	protein_coding	-	CCDS18490.1	1	508	30	9.72	1.5	435.6	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000073705	Cenps	ENSMUST00000176124	ENSMUSP00000134756	TRANSLATION	protein_coding	stop	-	3	77	0	1.83	0	41.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073705	Cenps	ENSMUST00000150150	ENSMUSP00000121878	TRANSLATION	protein_coding	stop	-	3	58	0	1.83	0	41.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073705	Cenps	ENSMUST00000105696	ENSMUSP00000101321	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	2.16	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073705	Cenps	ENSMUST00000177408	ENSMUSP00000135536	TRANSLATION	protein_coding	-	-	2	74	0	1.3	0	36.1	0	-4,-5	-	-	2.316	MINOR
ENSMUSG00000073705	Cenps	ENSMUST00000132672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073705	Cenps	ENSMUST00000030813	ENSMUSP00000030813	TRANSLATION	protein_coding	-	CCDS18954.1	1	142	0	3.79	0.5	114.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073705	Cenps	ENSMUST00000105695	ENSMUSP00000101320	TRANSLATION	protein_coding	-	-	1	76	0	1.96	0	69.7	0	-4,-5	-	-	5.652	MINOR
ENSMUSG00000100549	Ifna11	ENSMUST00000170428	ENSMUSP00000127921	TRANSLATION	protein_coding	-	CCDS38810.1	-	190	3	1	3.9	197.9	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000066043	Phactr4	ENSMUST00000136711	ENSMUSP00000122194	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066043	Phactr4	ENSMUST00000084170	ENSMUSP00000081185	TRANSLATION	protein_coding	-	CCDS51318.1	1	667	0	3.25	0.5	62.8	0	-4,-5	-	-	8.484	MINOR
ENSMUSG00000066043	Phactr4	ENSMUST00000152271	ENSMUSP00000119767	TRANSLATION	protein_coding	stop	-	5	298	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066043	Phactr4	ENSMUST00000102568	ENSMUSP00000099628	TRANSLATION	protein_coding	-	CCDS18724.1	1	694	0	4	0.5	94.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000066043	Phactr4	ENSMUST00000127516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066043	Phactr4	ENSMUST00000084249	ENSMUSP00000081270	TRANSLATION	protein_coding	-	-	5	704	0	4	0.5	94.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029050	Ski	ENSMUST00000084103	ENSMUSP00000081120	TRANSLATION	protein_coding	-	-	5	675	4	1	0	273.2	0	-4,-6	-	-	12.622	MINOR
ENSMUSG00000029050	Ski	ENSMUST00000129314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029050	Ski	ENSMUST00000030917	ENSMUSP00000030917	TRANSLATION	protein_coding	-	CCDS19024.1	1	727	4	1.8	2.9	285.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028957	Per3	ENSMUST00000128283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028957	Per3	ENSMUST00000136398	ENSMUSP00000118950	TRANSLATION	nonsense_mediated_decay	-	-	5	426	0	6.67	0	54.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028957	Per3	ENSMUST00000103204	ENSMUSP00000099493	TRANSLATION	protein_coding	-	CCDS18978.1	1	1113	0	9.28	0.5	164.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028957	Per3	ENSMUST00000138052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028957	Per3	ENSMUST00000138584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000134572	ENSMUSP00000122308	TRANSLATION	protein_coding	start/stop	-	5	138	0	1.98	0	29.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028402	Mpdz	ENSMUST00000131418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000125288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028402	Mpdz	ENSMUST00000134726	ENSMUSP00000116830	TRANSLATION	protein_coding	start	-	5	495	0	9.95	0	270.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028402	Mpdz	ENSMUST00000131547	ENSMUSP00000116767	TRANSLATION	protein_coding	start/stop	-	5	209	0	4.45	0	63.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028402	Mpdz	ENSMUST00000124805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000129732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000156441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000220807	ENSMUSP00000152533	TRANSLATION	protein_coding	-	-	5	2069	0	32.56	1.5	838.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028402	Mpdz	ENSMUST00000131197	ENSMUSP00000122498	TRANSLATION	protein_coding	start/stop	-	5	269	0	4.83	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028402	Mpdz	ENSMUST00000140425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000107262	ENSMUSP00000102883	TRANSLATION	protein_coding	-	-	5	2056	0	32.56	1.5	838.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028402	Mpdz	ENSMUST00000142273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028402	Mpdz	ENSMUST00000102830	ENSMUSP00000099894	TRANSLATION	protein_coding	-	CCDS18292.1	1	2055	0	32.56	1.5	838.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028402	Mpdz	ENSMUST00000107258	ENSMUSP00000102879	TRANSLATION	protein_coding	-	-	1	2022	0	32.56	1.5	838.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028402	Mpdz	ENSMUST00000141995	ENSMUSP00000118283	TRANSLATION	protein_coding	start/stop	-	5	348	0	2.76	0	51.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028228	Cpne3	ENSMUST00000108254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028228	Cpne3	ENSMUST00000134025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028228	Cpne3	ENSMUST00000029885	ENSMUSP00000029885	TRANSLATION	protein_coding	-	CCDS17991.1	1	533	5	3.295	17.3	410.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028314	Toporsl	ENSMUST00000029995	ENSMUSP00000029995	TRANSLATION	protein_coding	-	CCDS18182.1	1	683	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000028314	Toporsl	ENSMUST00000107671	ENSMUSP00000103298	TRANSLATION	protein_coding	-	CCDS18182.1	1	683	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000064141	Zfp69	ENSMUST00000106281	ENSMUSP00000101888	TRANSLATION	protein_coding	-	CCDS18597.2	1	587	36	2.2	0.5	234.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000064141	Zfp69	ENSMUST00000132839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064141	Zfp69	ENSMUST00000130702	ENSMUSP00000133312	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064141	Zfp69	ENSMUST00000106280	ENSMUSP00000101887	TRANSLATION	protein_coding	-	CCDS18597.2	5	587	36	2.2	0.5	234.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044018	Mrpl50	ENSMUST00000057829	ENSMUSP00000062476	TRANSLATION	protein_coding	-	CCDS18174.1	1	159	0	2	2.7	46.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000040025	Ythdf2	ENSMUST00000165072	ENSMUSP00000129225	TRANSLATION	protein_coding	start	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040025	Ythdf2	ENSMUST00000085181	ENSMUSP00000082275	TRANSLATION	protein_coding	-	-	2	51	0	0.33	0	0	0	-4,-5	-	-	1.752	MINOR
ENSMUSG00000040025	Ythdf2	ENSMUST00000152796	ENSMUSP00000120414	TRANSLATION	protein_coding	-	CCDS18719.1	1	579	0	1.13	6.1	144	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000040025	Ythdf2	ENSMUST00000102570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038709	Txndc8	ENSMUST00000239406	ENSMUSP00000159291	TRANSLATION	protein_coding	-	CCDS18208.1	-	153	6	3.76	0.5	82	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000038709	Txndc8	ENSMUST00000139256	ENSMUSP00000117634	TRANSLATION	protein_coding	start	-	3	42	1	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038709	Txndc8	ENSMUST00000154540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038709	Txndc8	ENSMUST00000102897	ENSMUSP00000099961	TRANSLATION	protein_coding	-	-	1	127	6	3.76	1	82	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038192	Cer1	ENSMUST00000048430	ENSMUSP00000048607	TRANSLATION	protein_coding	-	CCDS18295.1	1	272	0	0.48	0.5	99.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000050213	Snip1	ENSMUST00000052183	ENSMUSP00000060721	TRANSLATION	protein_coding	-	CCDS18636.1	1	383	0	1.6	0.5	67.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050213	Snip1	ENSMUST00000145733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029032	Arhgef16	ENSMUST00000030898	ENSMUSP00000030898	TRANSLATION	protein_coding	-	CCDS51399.1	1	713	0	7.395	3.9	206.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000029032	Arhgef16	ENSMUST00000144145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029032	Arhgef16	ENSMUST00000154895	ENSMUSP00000121273	TRANSLATION	protein_coding	stop	-	5	232	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029032	Arhgef16	ENSMUST00000152947	ENSMUSP00000119398	TRANSLATION	protein_coding	stop	-	3	173	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029032	Arhgef16	ENSMUST00000169623	ENSMUSP00000126296	TRANSLATION	protein_coding	-	CCDS51399.1	1	713	0	7.395	3.9	206.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000029032	Arhgef16	ENSMUST00000129189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029032	Arhgef16	ENSMUST00000143141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028307	Aldob	ENSMUST00000148415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028307	Aldob	ENSMUST00000144372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028307	Aldob	ENSMUST00000029987	ENSMUSP00000029987	TRANSLATION	protein_coding	-	CCDS18176.1	1	364	20	7.25	19.3	584.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028310	Ppp3r2	ENSMUST00000029991	ENSMUSP00000029991	TRANSLATION	protein_coding	-	CCDS18179.1	1	179	25	1.066	1.5	84.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043003	Rasef	ENSMUST00000222414	ENSMUSP00000152127	TRANSLATION	protein_coding	-	-	5	708	25	4.9	1.5	208.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043003	Rasef	ENSMUST00000058292	ENSMUSP00000062771	TRANSLATION	protein_coding	-	CCDS18281.1	5	627	20	4.9	0.5	169.9	0	-4,-7	-	-	12.33	MINOR
ENSMUSG00000043003	Rasef	ENSMUST00000102837	ENSMUSP00000099901	TRANSLATION	protein_coding	-	-	1	555	20	4.9	0	169.9	0	-4,-5	-	-	12.33	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000146000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028649	Macf1	ENSMUST00000147228	ENSMUSP00000115847	TRANSLATION	protein_coding	stop	-	1	2030	0	24.91	0	109.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000238731	ENSMUSP00000158792	TRANSLATION	protein_coding	-	-	-	5309	15	34.865	0	1005.4	0	-4,-5	-	-	11.16	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000106220	ENSMUSP00000101827	TRANSLATION	protein_coding	-	-	5	5478	15	31.53	0	927.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000084301	ENSMUSP00000081324	TRANSLATION	protein_coding	-	-	5	7351	15	35.285	0	1249.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028649	Macf1	ENSMUST00000125447	ENSMUSP00000153121	TRANSLATION	protein_coding	stop	-	5	1358	0	1.88	0	102.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000106224	ENSMUSP00000101831	TRANSLATION	protein_coding	-	-	5	7353	15	35.285	0.5	1249.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028649	Macf1	ENSMUST00000154824	ENSMUSP00000117188	TRANSLATION	protein_coding	start	-	1	544	15	2.095	0	152.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000140596	ENSMUSP00000117433	TRANSLATION	protein_coding	start/stop	-	5	369	0	0	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000238866	ENSMUSP00000158868	TRANSLATION	protein_coding	stop	-	-	326	0	8.74	0	163.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000097897	ENSMUSP00000095507	TRANSLATION	protein_coding	-	CCDS57295.1	1	7355	15	35.285	0.5	1249.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028649	Macf1	ENSMUST00000238555	ENSMUSP00000158828	TRANSLATION	protein_coding	-	-	-	5323	15	34.865	0	1005.4	0	-4,-6	-	-	11.16	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000151346	ENSMUSP00000114568	TRANSLATION	protein_coding	start	-	5	5333	15	34.28	0	996.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000106213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028649	Macf1	ENSMUST00000147030	ENSMUSP00000123246	TRANSLATION	protein_coding	stop	-	1	1837	0	28.61	0	192.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000082108	ENSMUSP00000080755	TRANSLATION	protein_coding	-	CCDS57294.1	1	5328	15	35.285	1.5	1014	0	-4,-5	-	-	12	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000123765	ENSMUSP00000119600	TRANSLATION	protein_coding	start	-	1	452	15	2.095	0	152.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000134458	ENSMUSP00000119885	TRANSLATION	protein_coding	start	-	5	4429	15	16.93	0	858.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028649	Macf1	ENSMUST00000149022	ENSMUSP00000116085	TRANSLATION	protein_coding	start	-	5	349	10	1.66	0	116.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028430	Nol6	ENSMUST00000030138	ENSMUSP00000030138	TRANSLATION	protein_coding	-	CCDS38715.1	1	1152	0	7.135	0.5	142.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028430	Nol6	ENSMUST00000135059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028430	Nol6	ENSMUST00000129112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028430	Nol6	ENSMUST00000155315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028414	Fktn	ENSMUST00000107638	ENSMUSP00000138774	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000028414	Fktn	ENSMUST00000222290	ENSMUSP00000152154	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000028414	Fktn	ENSMUST00000221657	ENSMUSP00000152867	TRANSLATION	protein_coding	-	-	5	500	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028414	Fktn	ENSMUST00000061771	ENSMUSP00000061489	TRANSLATION	protein_coding	-	CCDS18191.1	5	461	0	0	9.6	0	0	0,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000028414	Fktn	ENSMUST00000128667	ENSMUSP00000114699	TRANSLATION	protein_coding	-	CCDS18191.1	1	461	0	0	9.6	0	0	0,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000035495	Tstd2	ENSMUST00000147837	ENSMUSP00000115473	TRANSLATION	protein_coding	stop	-	2	129	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035495	Tstd2	ENSMUST00000107772	ENSMUSP00000103401	TRANSLATION	protein_coding	-	CCDS38757.1	1	495	8	2.9	1.5	91.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035495	Tstd2	ENSMUST00000144495	ENSMUSP00000117990	TRANSLATION	protein_coding	stop	-	3	108	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035495	Tstd2	ENSMUST00000160008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035495	Tstd2	ENSMUST00000156021	ENSMUSP00000117865	TRANSLATION	protein_coding	stop	-	3	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035495	Tstd2	ENSMUST00000107770	ENSMUSP00000103399	TRANSLATION	protein_coding	-	CCDS38757.1	1	495	8	2.9	1.5	91.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035495	Tstd2	ENSMUST00000137399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035495	Tstd2	ENSMUST00000129929	ENSMUSP00000125707	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028552	Eps15	ENSMUST00000030281	ENSMUSP00000030281	TRANSLATION	protein_coding	-	CCDS51259.1	1	583	0	1.14	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000028552	Eps15	ENSMUST00000176251	ENSMUSP00000135034	TRANSLATION	nonsense_mediated_decay	-	-	1	793	13	10.15	0.5	12	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000028552	Eps15	ENSMUST00000141751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028552	Eps15	ENSMUST00000102729	ENSMUSP00000099790	TRANSLATION	protein_coding	-	CCDS18462.1	1	897	13	10.15	1.7	12	0	-3,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028552	Eps15	ENSMUST00000177089	ENSMUSP00000134922	TRANSLATION	protein_coding	stop	-	3	103	3	2.78	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000028552	Eps15	ENSMUST00000126015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028552	Eps15	ENSMUST00000177140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028552	Eps15	ENSMUST00000175776	ENSMUSP00000135270	TRANSLATION	protein_coding	-	-	5	933	13	10.15	0.5	12	0	-3,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028552	Eps15	ENSMUST00000150755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028552	Eps15	ENSMUST00000177192	ENSMUSP00000135755	TRANSLATION	protein_coding	start	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028552	Eps15	ENSMUST00000132165	ENSMUSP00000118949	TRANSLATION	protein_coding	-	-	5	764	13	9.67	0	12	0	-3,-5	-	-	17.04	ALTERNATIVE:2
ENSMUSG00000006445	Epha2	ENSMUST00000149002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006445	Epha2	ENSMUST00000145523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006445	Epha2	ENSMUST00000006614	ENSMUSP00000006614	TRANSLATION	protein_coding	-	CCDS18869.1	1	977	19	12.75	5.1	806.8	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000006445	Epha2	ENSMUST00000131026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040972	Igsf21	ENSMUST00000039331	ENSMUSP00000046558	TRANSLATION	protein_coding	-	CCDS18851.1	1	468	0	2.79	7.5	29.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000046790	Olfr1341	ENSMUST00000215117	ENSMUSP00000149466	TRANSLATION	protein_coding	-	CCDS38855.1	5	312	0	0.42	3.9	181.3	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046790	Olfr1341	ENSMUST00000214131	ENSMUSP00000151040	TRANSLATION	protein_coding	-	CCDS38855.1	5	312	0	0.42	3.9	181.3	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046790	Olfr1341	ENSMUST00000061215	ENSMUSP00000095523	TRANSLATION	protein_coding	-	CCDS38855.1	-	312	0	0.42	3.9	181.3	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028955	Vamp3	ENSMUST00000030797	ENSMUSP00000030797	TRANSLATION	protein_coding	-	CCDS18979.1	1	103	0	1.85	2.7	118.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028955	Vamp3	ENSMUST00000155446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028955	Vamp3	ENSMUST00000125205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046447	Camk2n1	ENSMUST00000050918	ENSMUSP00000060349	TRANSLATION	protein_coding	-	CCDS38930.1	1	78	0	0	13	157.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057280	Musk	ENSMUST00000102893	ENSMUSP00000099957	TRANSLATION	protein_coding	-	CCDS18210.1	5	860	18	10.45	4.1	526.7	1	-1,-4	-	-	18.852	MINOR
ENSMUSG00000057280	Musk	ENSMUST00000098059	ENSMUSP00000095667	TRANSLATION	protein_coding	-	-	5	870	18	10.45	4.1	526.7	1	-1,-4	-	-	18.852	MINOR
ENSMUSG00000057280	Musk	ENSMUST00000084578	ENSMUSP00000081625	TRANSLATION	protein_coding	-	CCDS18211.1	5	868	18	10.78	5.1	526.7	1	-1,-4	-	-	20	PRINCIPAL:2
ENSMUSG00000057280	Musk	ENSMUST00000098057	ENSMUSP00000095665	TRANSLATION	protein_coding	-	CCDS51182.1	1	893	18	10.78	0.5	526.7	1	-1,-4	-	-	18	MINOR
ENSMUSG00000057280	Musk	ENSMUST00000177951	ENSMUSP00000136696	TRANSLATION	protein_coding	-	CCDS38770.1	5	870	18	10.45	4.1	526.7	1	-1,-4	-	-	18.852	MINOR
ENSMUSG00000057280	Musk	ENSMUST00000135879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057280	Musk	ENSMUST00000179951	ENSMUSP00000137453	TRANSLATION	protein_coding	-	-	5	878	18	10.78	4.1	526.7	1	-1,-4	-	-	19.512	ALTERNATIVE:2
ENSMUSG00000057280	Musk	ENSMUST00000081919	ENSMUSP00000080590	TRANSLATION	protein_coding	-	-	1	868	18	10.78	3.9	526.7	1	-1,-4	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000070868	Skint3	ENSMUST00000170945	ENSMUSP00000131300	TRANSLATION	protein_coding	-	CCDS51268.1	1	458	0	1.95	0.5	80.8	3	0,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000070868	Skint3	ENSMUST00000038455	ENSMUSP00000042662	TRANSLATION	protein_coding	-	CCDS38838.1	1	386	0	1.95	0.5	80.8	2	0,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000040387	Klhl32	ENSMUST00000084781	ENSMUSP00000081839	TRANSLATION	protein_coding	-	CCDS38702.1	1	587	0	4.32	3.9	231.8	0	-4,-5	-	-	10.526	MINOR
ENSMUSG00000040387	Klhl32	ENSMUST00000108214	ENSMUSP00000103849	TRANSLATION	protein_coding	-	-	5	358	0	4.4	1.2	147.2	0	-4,-5	-	-	4.756	MINOR
ENSMUSG00000040387	Klhl32	ENSMUST00000144062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040387	Klhl32	ENSMUST00000140652	ENSMUSP00000137312	TRANSLATION	nonsense_mediated_decay	-	-	5	139	0	2.6	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040387	Klhl32	ENSMUST00000108213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040387	Klhl32	ENSMUST00000108218	ENSMUSP00000103853	TRANSLATION	protein_coding	-	CCDS51131.1	5	620	0	5.12	13.6	245	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040387	Klhl32	ENSMUST00000150920	ENSMUSP00000135917	TRANSLATION	nonsense_mediated_decay	start	-	5	50	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029047	Pex10	ENSMUST00000134341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029047	Pex10	ENSMUST00000125432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029047	Pex10	ENSMUST00000103180	ENSMUSP00000099469	TRANSLATION	protein_coding	-	CCDS19021.1	1	324	9	1.39	5.1	176.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029047	Pex10	ENSMUST00000133116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029047	Pex10	ENSMUST00000123395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115115	AL607142.1	ENSMUST00000226560	ENSMUSP00000154396	TRANSLATION	protein_coding	-	-	-	25	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000055960	Skint4	ENSMUST00000106564	ENSMUSP00000102174	TRANSLATION	protein_coding	-	CCDS84779.1	1	474	0	1.8	0.5	57.5	1	2,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000055960	Skint4	ENSMUST00000106565	ENSMUSP00000102175	TRANSLATION	protein_coding	-	CCDS84779.1	1	474	0	1.8	0.5	57.5	1	2,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000055960	Skint4	ENSMUST00000106566	ENSMUSP00000102176	TRANSLATION	protein_coding	-	CCDS38837.1	1	482	0	1.8	0.5	57.5	1	0,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000055960	Skint4	ENSMUST00000069769	ENSMUSP00000070676	TRANSLATION	protein_coding	-	CCDS84779.1	2	474	0	1.8	0.5	57.5	1	2,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000037996	Slc24a2	ENSMUST00000146815	ENSMUSP00000119537	TRANSLATION	protein_coding	start/stop	-	3	168	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037996	Slc24a2	ENSMUST00000155361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037996	Slc24a2	ENSMUST00000134643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037996	Slc24a2	ENSMUST00000107155	ENSMUSP00000102773	TRANSLATION	protein_coding	-	-	5	645	5	0.8	4.1	214.3	8	-4,-7	-	-	18.442	ALTERNATIVE:2
ENSMUSG00000037996	Slc24a2	ENSMUST00000107157	ENSMUSP00000102775	TRANSLATION	protein_coding	-	CCDS18312.1	1	666	5	0.8	2.7	214.3	8	-4,-7	-	-	17.79	MINOR
ENSMUSG00000037996	Slc24a2	ENSMUST00000044990	ENSMUSP00000043937	TRANSLATION	protein_coding	-	-	5	662	5	0.8	5.3	214.3	8	-4,-7	-	-	19	PRINCIPAL:5
ENSMUSG00000037996	Slc24a2	ENSMUST00000134248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037996	Slc24a2	ENSMUST00000140780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037996	Slc24a2	ENSMUST00000107158	ENSMUSP00000102776	TRANSLATION	protein_coding	-	CCDS51220.1	1	711	5	0.8	0.5	214.3	8	-4,-7	-	-	17	MINOR
ENSMUSG00000028672	Hmgcl	ENSMUST00000148613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028672	Hmgcl	ENSMUST00000151879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028672	Hmgcl	ENSMUST00000030432	ENSMUSP00000030432	TRANSLATION	protein_coding	-	CCDS18795.1	1	325	4	7.5	1.5	241.9	0	-3,1	-	-	16	PRINCIPAL:1
ENSMUSG00000028672	Hmgcl	ENSMUST00000135644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028672	Hmgcl	ENSMUST00000134135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094066	Fam205a2	ENSMUST00000180201	ENSMUSP00000136864	TRANSLATION	protein_coding	-	-	5	1308	0	0	0.5	122.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043252	Tmem64	ENSMUST00000062684	ENSMUSP00000055892	TRANSLATION	protein_coding	-	CCDS17983.1	1	381	0	0	3.9	67.9	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000089873	Mup13	ENSMUST00000072678	ENSMUSP00000072466	TRANSLATION	protein_coding	-	CCDS84743.1	2	180	0	5.08	0.5	111.2	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000089873	Mup13	ENSMUST00000098042	ENSMUSP00000095650	TRANSLATION	protein_coding	-	-	5	235	0	5.05	0.5	111.2	0	4,-1	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000028786	Tmem54	ENSMUST00000148979	ENSMUSP00000123006	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	93.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028786	Tmem54	ENSMUST00000030577	ENSMUSP00000030577	TRANSLATION	protein_coding	-	CCDS71472.1	3	205	0	0	0.5	210.9	8	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000028786	Tmem54	ENSMUST00000106064	ENSMUSP00000101679	TRANSLATION	protein_coding	-	CCDS18681.1	1	219	0	0	1.5	210.9	8	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000028786	Tmem54	ENSMUST00000030575	ENSMUSP00000030575	TRANSLATION	protein_coding	-	CCDS57298.1	1	185	0	0	0.5	109.3	6	-4,-7	-	-	0	MINOR
ENSMUSG00000074738	Fndc10	ENSMUST00000099265	ENSMUSP00000096871	TRANSLATION	protein_coding	-	CCDS57321.1	-	223	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043411	Usp48	ENSMUST00000153869	ENSMUSP00000117989	TRANSLATION	protein_coding	start	-	2	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000055131	ENSMUSP00000055016	TRANSLATION	protein_coding	-	CCDS38924.1	1	1052	8	5.38	0.5	141.1	0	-4,-6	-	-	17.664	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000141426	ENSMUSP00000118084	TRANSLATION	protein_coding	start/stop	-	3	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000151807	ENSMUSP00000115526	TRANSLATION	protein_coding	start	-	3	123	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000138599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043411	Usp48	ENSMUST00000152985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043411	Usp48	ENSMUST00000154395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043411	Usp48	ENSMUST00000141628	ENSMUSP00000119691	TRANSLATION	protein_coding	stop	-	3	267	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000131755	ENSMUSP00000114800	TRANSLATION	protein_coding	start	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000105840	ENSMUSP00000101466	TRANSLATION	protein_coding	-	CCDS84808.1	5	1036	8	5.5	6.4	142.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000043411	Usp48	ENSMUST00000128065	ENSMUSP00000115533	TRANSLATION	protein_coding	start	-	2	170	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000153100	ENSMUSP00000123154	TRANSLATION	protein_coding	stop	-	3	165	2	0.96	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000125151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043411	Usp48	ENSMUST00000105838	ENSMUSP00000101464	TRANSLATION	protein_coding	stop	-	5	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000157012	ENSMUSP00000118081	TRANSLATION	protein_coding	start	-	3	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000105839	ENSMUSP00000101465	TRANSLATION	protein_coding	stop	-	1	631	8	5.5	0	142.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043411	Usp48	ENSMUST00000105837	ENSMUSP00000101463	TRANSLATION	protein_coding	stop	-	1	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000084845	Tmem240	ENSMUST00000176526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084845	Tmem240	ENSMUST00000147721	ENSMUSP00000130974	TRANSLATION	protein_coding	-	CCDS51403.1	1	173	0	0	14	356.3	2	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000084845	Tmem240	ENSMUST00000127188	ENSMUSP00000127341	TRANSLATION	protein_coding	-	CCDS51403.1	2	173	0	0	14	356.3	2	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028690	Mmachc	ENSMUST00000030453	ENSMUSP00000030453	TRANSLATION	protein_coding	-	CCDS51278.1	1	279	21	3.75	0.5	327.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028690	Mmachc	ENSMUST00000143330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028287	1700009N14Rik	ENSMUST00000029955	ENSMUSP00000029955	TRANSLATION	protein_coding	-	CCDS38709.1	1	216	23	1	19.5	165.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038070	Cntln	ENSMUST00000107190	ENSMUSP00000102808	TRANSLATION	protein_coding	-	-	1	262	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038070	Cntln	ENSMUST00000169371	ENSMUSP00000130491	TRANSLATION	protein_coding	-	CCDS51216.1	5	1396	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000038070	Cntln	ENSMUST00000047023	ENSMUSP00000044138	TRANSLATION	protein_coding	-	-	5	1397	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000038070	Cntln	ENSMUST00000102819	ENSMUSP00000099883	TRANSLATION	protein_coding	-	CCDS18302.1	1	318	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:3
ENSMUSG00000011257	Pabpc4	ENSMUST00000106241	ENSMUSP00000101848	TRANSLATION	protein_coding	-	-	5	644	0	9.96	7.5	407.2	0	-4,-5	-	-	14.08	MINOR
ENSMUSG00000011257	Pabpc4	ENSMUST00000146156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011257	Pabpc4	ENSMUST00000156807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011257	Pabpc4	ENSMUST00000124991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011257	Pabpc4	ENSMUST00000078734	ENSMUSP00000077794	TRANSLATION	protein_coding	-	CCDS18615.1	1	615	0	9.96	6.3	407.2	0	-4,-5	-	-	13.696	MINOR
ENSMUSG00000011257	Pabpc4	ENSMUST00000106243	ENSMUSP00000101850	TRANSLATION	protein_coding	-	-	5	631	0	9.96	13.5	407.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000011257	Pabpc4	ENSMUST00000183940	ENSMUSP00000139135	TRANSLATION	nonsense_mediated_decay	-	-	1	168	0	3	0	150.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011257	Pabpc4	ENSMUST00000080178	ENSMUSP00000079070	TRANSLATION	protein_coding	-	CCDS18614.1	1	660	0	9.96	7.5	407.2	0	-4,-5	-	-	14.08	MINOR
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000105672	ENSMUSP00000101297	TRANSLATION	protein_coding	-	CCDS38980.1	1	211	0	3.005	0.5	26.5	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000105671	ENSMUSP00000101296	TRANSLATION	protein_coding	-	CCDS18976.1	1	256	0	3.005	1.5	26.5	1	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000126707	ENSMUSP00000122917	TRANSLATION	protein_coding	stop	-	5	224	0	3.005	0	26.5	1	1,-3	-	-	-1	MINOR
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000116257	ENSMUSP00000111961	TRANSLATION	protein_coding	-	CCDS18976.1	1	256	0	3.005	1.5	26.5	1	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000135169	ENSMUSP00000120761	TRANSLATION	protein_coding	stop	-	3	179	0	3.005	0	26.5	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000146133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000139826	ENSMUSP00000117860	TRANSLATION	protein_coding	stop	-	3	176	0	3.005	0	26.5	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000060901	ENSMUSP00000059684	TRANSLATION	protein_coding	-	CCDS38980.1	1	211	0	3.005	0.5	26.5	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000028965	Tnfrsf9	ENSMUST00000030808	ENSMUSP00000030808	TRANSLATION	protein_coding	-	CCDS18976.1	1	256	0	3.005	1.5	26.5	1	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000028245	Nsmaf	ENSMUST00000029910	ENSMUSP00000029910	TRANSLATION	protein_coding	-	CCDS17952.1	1	920	0	13.335	5.1	497.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028245	Nsmaf	ENSMUST00000149015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028245	Nsmaf	ENSMUST00000143704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028245	Nsmaf	ENSMUST00000143566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028245	Nsmaf	ENSMUST00000156283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028245	Nsmaf	ENSMUST00000156078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028245	Nsmaf	ENSMUST00000143983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028245	Nsmaf	ENSMUST00000124344	ENSMUSP00000120980	TRANSLATION	protein_coding	stop	-	5	132	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028245	Nsmaf	ENSMUST00000145399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028245	Nsmaf	ENSMUST00000156715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028245	Nsmaf	ENSMUST00000124656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029048	Rer1	ENSMUST00000030914	ENSMUSP00000030914	TRANSLATION	protein_coding	-	CCDS19022.1	1	196	0	0	17.5	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000029048	Rer1	ENSMUST00000125357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029048	Rer1	ENSMUST00000149796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000136545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000137054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000044616	ENSMUSP00000038418	TRANSLATION	protein_coding	-	CCDS17967.1	1	995	0	0	10.6	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000040738	Ints8	ENSMUST00000108318	ENSMUSP00000103954	TRANSLATION	protein_coding	-	-	5	978	0	0	3.2	0	0	-4,-5	-	-	0.687	MINOR
ENSMUSG00000040738	Ints8	ENSMUST00000133031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000147372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000145252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040738	Ints8	ENSMUST00000108319	ENSMUSP00000103955	TRANSLATION	protein_coding	-	CCDS17967.1	1	995	0	0	10.6	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000094648	Gm13287	ENSMUST00000179490	ENSMUSP00000136234	TRANSLATION	protein_coding	-	CCDS51228.1	-	182	0	0.48	0.5	94.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000055296	Tmem245	ENSMUST00000155625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055296	Tmem245	ENSMUST00000132816	ENSMUSP00000117449	TRANSLATION	protein_coding	start	-	5	471	0	0	0	45.6	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000055296	Tmem245	ENSMUST00000125082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055296	Tmem245	ENSMUST00000068792	ENSMUSP00000067421	TRANSLATION	protein_coding	-	-	5	876	0	0	1.5	45.6	10	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000055296	Tmem245	ENSMUST00000107609	ENSMUSP00000103234	TRANSLATION	protein_coding	-	CCDS38767.1	5	880	0	0	1.5	45.6	10	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000055198	Gm12830	ENSMUST00000137570	ENSMUSP00000120534	TRANSLATION	protein_coding	start	-	2	157	0	0	0	0	0	-2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000045973	Slc25a51	ENSMUST00000116341	ENSMUSP00000112044	TRANSLATION	protein_coding	-	CCDS18137.1	1	298	0	1.024	7.5	103.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045973	Slc25a51	ENSMUST00000132815	ENSMUSP00000134132	TRANSLATION	protein_coding	-	CCDS18137.1	2	298	0	1.024	7.5	103.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045973	Slc25a51	ENSMUST00000151516	ENSMUSP00000134108	TRANSLATION	protein_coding	stop	-	1	195	0	0	0	37.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045973	Slc25a51	ENSMUST00000153904	ENSMUSP00000122620	TRANSLATION	protein_coding	stop	-	3	205	0	0.28	0	62.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045973	Slc25a51	ENSMUST00000134714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045973	Slc25a51	ENSMUST00000107796	ENSMUSP00000103425	TRANSLATION	protein_coding	-	-	1	315	0	1.024	0.5	103.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000028572	Hook1	ENSMUST00000140128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000156910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000148291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000030306	ENSMUSP00000030306	TRANSLATION	protein_coding	-	CCDS18367.1	1	728	0	4.8	3.9	1030.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000028572	Hook1	ENSMUST00000125627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000107083	ENSMUSP00000102698	TRANSLATION	protein_coding	-	-	1	221	0	4.8	0	325.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000028572	Hook1	ENSMUST00000125584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000124202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000143326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000146947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028572	Hook1	ENSMUST00000141448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000159488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000105648	ENSMUSP00000101273	TRANSLATION	protein_coding	-	CCDS19000.1	1	367	32	10.33	16.2	248.4	0	-4,-6	-	-	21.298	PRINCIPAL:1
ENSMUSG00000028931	Kcnab2	ENSMUST00000238738	ENSMUSP00000158843	TRANSLATION	protein_coding	-	-	-	382	32	10.68	9.6	242.8	0	-4,-6	-	-	19.928	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000162017	ENSMUSP00000123939	TRANSLATION	protein_coding	stop	-	5	38	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000162200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028931	Kcnab2	ENSMUST00000162518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000161844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000160884	ENSMUSP00000125058	TRANSLATION	protein_coding	-	CCDS19000.1	1	367	32	10.33	16.2	248.4	0	-4,-6	-	-	21.298	PRINCIPAL:1
ENSMUSG00000028931	Kcnab2	ENSMUST00000159844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000161496	ENSMUSP00000158599	TRANSLATION	protein_coding	stop	-	5	56	3	1.75	0	50.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000238252	ENSMUSP00000158771	TRANSLATION	protein_coding	-	-	-	398	32	9.08	11.4	248.4	0	-4,-6	-	-	17.538	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000162165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028931	Kcnab2	ENSMUST00000161236	ENSMUSP00000125270	TRANSLATION	protein_coding	stop	-	3	134	8	4.33	0	66.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000159186	ENSMUSP00000124588	TRANSLATION	protein_coding	-	-	5	300	28	8.08	2.4	234.1	0	-4,-5	-	-	9.644	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000030768	ENSMUSP00000030768	TRANSLATION	protein_coding	-	CCDS57316.1	1	353	32	9.83	14.2	248.4	0	-4,-2	-	-	19.774	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000159435	ENSMUSP00000158609	TRANSLATION	protein_coding	stop	-	3	51	3	1.75	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000159840	ENSMUSP00000124156	TRANSLATION	protein_coding	-	CCDS57316.1	1	353	32	9.83	14.2	248.4	0	-4,-2	-	-	19.774	MINOR
ENSMUSG00000028931	Kcnab2	ENSMUST00000238715	ENSMUSP00000158839	TRANSLATION	protein_coding	-	-	-	415	32	9.43	3.4	242.8	0	-4,-2	-	-	15.794	MINOR
ENSMUSG00000042763	Maneal	ENSMUST00000064444	ENSMUSP00000066000	TRANSLATION	protein_coding	-	CCDS18629.1	3	452	7	2.51	2.7	520.8	0	2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000040550	Otud6b	ENSMUST00000151012	ENSMUSP00000120430	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040550	Otud6b	ENSMUST00000117268	ENSMUSP00000113553	TRANSLATION	protein_coding	-	-	1	294	0	1.71	0	100.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000040550	Otud6b	ENSMUST00000236953	ENSMUSP00000157661	TRANSLATION	protein_coding	-	CCDS17980.2	-	325	0	1.71	6.3	100.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000078716	Tmem8b	ENSMUST00000107866	ENSMUSP00000103498	TRANSLATION	protein_coding	-	-	5	931	0	0	1.5	179.4	7	-4,-2	-	-	6.088	MINOR
ENSMUSG00000078716	Tmem8b	ENSMUST00000167153	ENSMUSP00000129760	TRANSLATION	protein_coding	-	CCDS51168.1	1	472	0	0	6.6	180.9	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000078716	Tmem8b	ENSMUST00000141864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078716	Tmem8b	ENSMUST00000143339	ENSMUSP00000130133	TRANSLATION	protein_coding	stop	-	5	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078716	Tmem8b	ENSMUST00000134869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078716	Tmem8b	ENSMUST00000143774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078716	Tmem8b	ENSMUST00000154112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078716	Tmem8b	ENSMUST00000107865	ENSMUSP00000103497	TRANSLATION	protein_coding	-	CCDS51168.1	1	472	0	0	6.6	180.9	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000078716	Tmem8b	ENSMUST00000107864	ENSMUSP00000103496	TRANSLATION	protein_coding	-	CCDS51168.1	5	472	0	0	6.6	180.9	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000019055	Plod1	ENSMUST00000149129	ENSMUSP00000118857	TRANSLATION	protein_coding	start/stop	-	5	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019055	Plod1	ENSMUST00000132075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019055	Plod1	ENSMUST00000124292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019055	Plod1	ENSMUST00000124041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019055	Plod1	ENSMUST00000019199	ENSMUSP00000019199	TRANSLATION	protein_coding	-	CCDS18924.1	1	728	3	0	1.5	27.6	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000019055	Plod1	ENSMUST00000105712	ENSMUSP00000101337	TRANSLATION	protein_coding	-	-	2	226	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000028410	Dnaja1	ENSMUST00000126020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028410	Dnaja1	ENSMUST00000164233	ENSMUSP00000129730	TRANSLATION	protein_coding	-	CCDS18049.1	5	397	8	8.06	14.8	303.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028410	Dnaja1	ENSMUST00000129204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028410	Dnaja1	ENSMUST00000148976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028410	Dnaja1	ENSMUST00000030118	ENSMUSP00000030118	TRANSLATION	protein_coding	-	CCDS18049.1	1	397	8	8.06	14.8	303.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028410	Dnaja1	ENSMUST00000149794	ENSMUSP00000121461	TRANSLATION	protein_coding	stop	-	5	128	0	2.45	0	93.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028410	Dnaja1	ENSMUST00000139406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028410	Dnaja1	ENSMUST00000137476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028410	Dnaja1	ENSMUST00000137246	ENSMUSP00000118294	TRANSLATION	protein_coding	stop	-	5	278	8	6.16	0	258.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028410	Dnaja1	ENSMUST00000125442	ENSMUSP00000116601	TRANSLATION	protein_coding	stop	-	2	208	8	4.08	0	152	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034610	Tut4	ENSMUST00000145590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000106673	ENSMUSP00000102284	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034610	Tut4	ENSMUST00000043368	ENSMUSP00000044836	TRANSLATION	protein_coding	-	CCDS18451.1	5	1644	31	9.18	0.5	172.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000034610	Tut4	ENSMUST00000097925	ENSMUSP00000095538	TRANSLATION	protein_coding	-	-	5	1648	31	9.18	0.5	172.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034610	Tut4	ENSMUST00000153916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000138809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000127602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000128042	ENSMUSP00000116253	TRANSLATION	protein_coding	start	-	2	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034610	Tut4	ENSMUST00000151349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000138088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034610	Tut4	ENSMUST00000155068	ENSMUSP00000120172	TRANSLATION	protein_coding	start	-	1	1006	21	4.32	0	65.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089687	Rab42	ENSMUST00000040411	ENSMUSP00000047735	TRANSLATION	protein_coding	-	CCDS38898.1	1	215	18	1.6	2.9	163.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078688	Mup2	ENSMUST00000148940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078688	Mup2	ENSMUST00000107490	ENSMUSP00000126948	TRANSLATION	protein_coding	-	CCDS18230.1	2	180	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078688	Mup2	ENSMUST00000074700	ENSMUSP00000074264	TRANSLATION	protein_coding	-	CCDS18230.1	1	180	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039005	Tlr4	ENSMUST00000147008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039005	Tlr4	ENSMUST00000143580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039005	Tlr4	ENSMUST00000048096	ENSMUSP00000045770	TRANSLATION	protein_coding	-	CCDS18271.1	1	835	0	2.8	1.5	178.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039005	Tlr4	ENSMUST00000107365	ENSMUSP00000102988	TRANSLATION	protein_coding	-	-	1	154	0	2.67	0	0	0	2,-2	-	-	5.724	MINOR
ENSMUSG00000028467	Gba2	ENSMUST00000152251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028467	Gba2	ENSMUST00000128403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028467	Gba2	ENSMUST00000144968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028467	Gba2	ENSMUST00000030189	ENSMUSP00000030189	TRANSLATION	protein_coding	-	CCDS18103.1	1	918	0	11.12	0.5	901.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028467	Gba2	ENSMUST00000130443	ENSMUSP00000119589	TRANSLATION	protein_coding	stop	-	5	230	0	1.84	0	50.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028467	Gba2	ENSMUST00000148426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028467	Gba2	ENSMUST00000139606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023286	Ube2j2	ENSMUST00000105582	ENSMUSP00000101207	TRANSLATION	protein_coding	-	CCDS19050.1	1	271	0	5.67	1.5	66.5	1	-4,-7	-	-	12.03	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000105581	ENSMUSP00000101206	TRANSLATION	protein_coding	-	CCDS19051.1	1	259	0	5.27	13	66.5	1	-4,-7	-	-	15.064	PRINCIPAL:1
ENSMUSG00000023286	Ube2j2	ENSMUST00000151892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023286	Ube2j2	ENSMUST00000105583	ENSMUSP00000101208	TRANSLATION	protein_coding	-	CCDS19050.1	1	271	0	5.67	1.5	66.5	1	-4,-7	-	-	12.03	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000152536	ENSMUSP00000114235	TRANSLATION	protein_coding	stop	-	5	120	0	3.41	0	43	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000166489	ENSMUSP00000127712	TRANSLATION	protein_coding	-	CCDS19051.1	1	259	0	5.27	13	66.5	1	-4,-7	-	-	15.064	PRINCIPAL:1
ENSMUSG00000023286	Ube2j2	ENSMUST00000024056	ENSMUSP00000024056	TRANSLATION	protein_coding	-	CCDS19050.1	1	271	0	5.67	1.5	66.5	1	-4,-7	-	-	12.03	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000138218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023286	Ube2j2	ENSMUST00000118192	ENSMUSP00000112785	TRANSLATION	protein_coding	-	CCDS71536.1	5	232	0	4.52	0.5	68.1	1	-4,-7	-	-	9.702	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000136492	ENSMUSP00000120855	TRANSLATION	protein_coding	stop	-	2	35	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023286	Ube2j2	ENSMUST00000103175	ENSMUSP00000099464	TRANSLATION	protein_coding	-	CCDS19051.1	1	259	0	5.27	13	66.5	1	-4,-7	-	-	15.064	PRINCIPAL:1
ENSMUSG00000023286	Ube2j2	ENSMUST00000150846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023286	Ube2j2	ENSMUST00000124092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028794	A3galt2	ENSMUST00000030585	ENSMUSP00000030585	TRANSLATION	protein_coding	-	CCDS18675.1	1	370	17	2.665	0.5	361.7	1	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000028794	A3galt2	ENSMUST00000106077	ENSMUSP00000101687	TRANSLATION	protein_coding	-	-	5	339	17	2.465	2.2	361.7	1	-3,-1	-	-	17.55	ALTERNATIVE:2
ENSMUSG00000028680	Plk3	ENSMUST00000076859	ENSMUSP00000076130	TRANSLATION	protein_coding	-	CCDS18529.1	1	648	19	11.9	2.9	337.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028680	Plk3	ENSMUST00000126135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028680	Plk3	ENSMUST00000147730	ENSMUSP00000120476	TRANSLATION	protein_coding	start	-	1	610	19	11.6	0	337.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089773	Skint1	ENSMUST00000162158	ENSMUSP00000124737	TRANSLATION	protein_coding	-	CCDS51267.1	1	364	0	1.95	0.5	52	3	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000089773	Skint1	ENSMUST00000117379	ENSMUSP00000124545	TRANSLATION	protein_coding	-	-	1	255	0	1.95	0	52	0	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000089773	Skint1	ENSMUST00000162885	ENSMUSP00000125625	TRANSLATION	protein_coding	-	-	1	163	0	1.15	0	52	0	0,-3	-	-	9.54	MINOR
ENSMUSG00000089773	Skint1	ENSMUST00000143802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089773	Skint1	ENSMUST00000161389	ENSMUSP00000125313	TRANSLATION	protein_coding	-	-	1	289	0	1.95	0	52	1	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000042408	Zmym6	ENSMUST00000129926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042408	Zmym6	ENSMUST00000151461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042408	Zmym6	ENSMUST00000046751	ENSMUSP00000045366	TRANSLATION	protein_coding	-	CCDS18664.1	1	1249	20	0	1.5	52.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042408	Zmym6	ENSMUST00000146616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042408	Zmym6	ENSMUST00000094713	ENSMUSP00000092303	TRANSLATION	protein_coding	-	CCDS71469.1	1	1157	18	0	0.5	29.8	0	-4,-5	-	-	8.046	MINOR
ENSMUSG00000042408	Zmym6	ENSMUST00000125160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049969	Plekhf2	ENSMUST00000137891	ENSMUSP00000123520	TRANSLATION	protein_coding	stop	-	3	197	6	0.6	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049969	Plekhf2	ENSMUST00000054776	ENSMUSP00000054745	TRANSLATION	protein_coding	-	CCDS17962.1	1	249	6	1	1.5	108	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050854	Tmem125	ENSMUST00000154025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050854	Tmem125	ENSMUST00000150044	ENSMUSP00000117871	TRANSLATION	protein_coding	stop	-	1	72	0	0	0	91.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000050854	Tmem125	ENSMUST00000060214	ENSMUSP00000063157	TRANSLATION	protein_coding	-	CCDS51285.1	2	216	0	0	0.5	173.9	6	-4,-7	-	-	5.982	PRINCIPAL:1
ENSMUSG00000050854	Tmem125	ENSMUST00000156191	ENSMUSP00000117286	TRANSLATION	protein_coding	stop	-	2	55	0	0	0	58.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000050854	Tmem125	ENSMUST00000128098	ENSMUSP00000115304	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	174.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000028433	Ubap2	ENSMUST00000143552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028433	Ubap2	ENSMUST00000132499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028433	Ubap2	ENSMUST00000140662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028433	Ubap2	ENSMUST00000108068	ENSMUSP00000103703	TRANSLATION	protein_coding	-	-	1	1131	0	2.39	0.5	78.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000028433	Ubap2	ENSMUST00000030143	ENSMUSP00000030143	TRANSLATION	protein_coding	-	CCDS18058.1	1	1132	0	2.39	0.5	78.3	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000028433	Ubap2	ENSMUST00000134782	ENSMUSP00000121724	TRANSLATION	protein_coding	start/stop	-	3	245	0	2.15	0	21.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028433	Ubap2	ENSMUST00000135323	ENSMUSP00000122256	TRANSLATION	protein_coding	stop	-	3	227	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028433	Ubap2	ENSMUST00000136057	ENSMUSP00000120205	TRANSLATION	protein_coding	start/stop	-	1	140	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000144554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028546	Elavl4	ENSMUST00000106600	ENSMUSP00000102210	TRANSLATION	protein_coding	-	-	5	383	0	5.8	1.5	217.4	0	-4,-5	-	-	12.162	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000106601	ENSMUSP00000102212	TRANSLATION	protein_coding	-	-	5	366	0	5.8	9.6	217.4	0	-4,-5	-	-	14.775	ALTERNATIVE:1
ENSMUSG00000028546	Elavl4	ENSMUST00000142722	ENSMUSP00000121828	TRANSLATION	protein_coding	stop	-	2	92	0	1	0	26.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000106603	ENSMUSP00000102214	TRANSLATION	protein_coding	-	CCDS51262.1	1	356	0	5.8	0.5	217.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000106598	ENSMUSP00000102208	TRANSLATION	protein_coding	-	CCDS84777.1	5	366	0	5.8	9.6	217.4	0	-4,-5	-	-	14.775	ALTERNATIVE:1
ENSMUSG00000028546	Elavl4	ENSMUST00000106597	ENSMUSP00000102207	TRANSLATION	protein_coding	-	CCDS18471.1	1	385	0	5.8	6.3	217.4	0	-4,-5	-	-	13.71	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000102723	ENSMUSP00000099784	TRANSLATION	protein_coding	-	CCDS18470.1	1	380	0	5.8	6.3	217.4	0	-4,-5	-	-	13.71	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000153200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028546	Elavl4	ENSMUST00000138972	ENSMUSP00000123014	TRANSLATION	protein_coding	stop	-	5	137	0	3	0	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000153906	ENSMUSP00000120942	TRANSLATION	protein_coding	stop	-	5	94	0	1.5	0	49.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028546	Elavl4	ENSMUST00000102722	ENSMUSP00000099783	TRANSLATION	protein_coding	-	CCDS51261.1	1	371	0	5.8	10.3	217.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000028698	Pik3r3	ENSMUST00000106490	ENSMUSP00000102099	TRANSLATION	protein_coding	-	-	5	402	0	7.83	1.2	237.3	0	-4,-5	-	-	4.058	MINOR
ENSMUSG00000028698	Pik3r3	ENSMUST00000147292	ENSMUSP00000118568	TRANSLATION	protein_coding	stop	-	5	82	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028698	Pik3r3	ENSMUST00000030464	ENSMUSP00000030464	TRANSLATION	protein_coding	-	CCDS18509.1	1	461	0	8.83	15.7	344.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000052137	Rbm12b2	ENSMUST00000095143	ENSMUSP00000092765	TRANSLATION	protein_coding	-	CCDS17975.1	1	834	0	0	0.5	83.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052137	Rbm12b2	ENSMUST00000063839	ENSMUSP00000066311	TRANSLATION	protein_coding	-	CCDS17975.1	1	834	0	0	0.5	83.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028963	Uts2	ENSMUST00000030803	ENSMUSP00000030803	TRANSLATION	protein_coding	-	CCDS18977.1	1	123	0	0	1.5	26.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045364	Ifne	ENSMUST00000056014	ENSMUSP00000059199	TRANSLATION	protein_coding	-	CCDS18348.1	-	192	0	0.6	1.5	168.5	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000028416	Bag1	ENSMUST00000108089	ENSMUSP00000103724	TRANSLATION	protein_coding	-	CCDS51139.1	1	219	0	6	1.5	59.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028416	Bag1	ENSMUST00000030125	ENSMUSP00000030125	TRANSLATION	protein_coding	start	-	1	355	0	6	0.5	59.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028416	Bag1	ENSMUST00000191273	ENSMUSP00000139864	TRANSLATION	protein_coding	-	CCDS51139.1	1	219	0	6	1.5	59.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039158	Akna	ENSMUST00000140586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039158	Akna	ENSMUST00000035724	ENSMUSP00000041614	TRANSLATION	protein_coding	-	CCDS38777.1	5	1404	0	0	0.5	116.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000049648	Olfr273	ENSMUST00000215274	ENSMUSP00000149869	TRANSLATION	nonsense_mediated_decay	-	-	5	317	0	0.36	6.4	187.2	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000049648	Olfr273	ENSMUST00000051520	ENSMUSP00000052080	TRANSLATION	protein_coding	-	CCDS18184.1	-	317	0	0.36	6.4	187.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049648	Olfr273	ENSMUST00000107670	ENSMUSP00000103297	TRANSLATION	protein_coding	-	CCDS18184.1	5	317	0	0.36	6.4	187.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000003032	Klf4	ENSMUST00000132746	ENSMUSP00000123687	TRANSLATION	protein_coding	stop	-	3	82	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003032	Klf4	ENSMUST00000129250	ENSMUSP00000116514	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003032	Klf4	ENSMUST00000107619	ENSMUSP00000103245	TRANSLATION	protein_coding	-	CCDS18195.2	1	483	12	2	3.9	69.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000035517	Tdrd7	ENSMUST00000151422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035517	Tdrd7	ENSMUST00000107777	ENSMUSP00000103406	TRANSLATION	protein_coding	-	CCDS71381.1	1	1119	0	6.955	1.5	319.5	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035517	Tdrd7	ENSMUST00000102929	ENSMUSP00000099993	TRANSLATION	protein_coding	-	CCDS18142.1	1	1086	0	6.955	1.5	319.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035517	Tdrd7	ENSMUST00000155936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035517	Tdrd7	ENSMUST00000140270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070617	Gm13089	ENSMUST00000073532	ENSMUSP00000073224	TRANSLATION	protein_coding	-	-	1	455	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000015242	Nipsnap3a	ENSMUST00000123780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015242	Nipsnap3a	ENSMUST00000107666	ENSMUSP00000103293	TRANSLATION	protein_coding	-	-	5	247	0	3.04	0.5	169.3	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000015242	Nipsnap3a	ENSMUST00000015386	ENSMUSP00000015386	TRANSLATION	nonsense_mediated_decay	-	-	1	245	0	3.04	2.9	169.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000015242	Nipsnap3a	ENSMUST00000188045	ENSMUSP00000140727	TRANSLATION	protein_coding	-	CCDS51177.1	1	245	0	3.04	2.9	169.3	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000006392	Med8	ENSMUST00000125235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006392	Med8	ENSMUST00000135201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006392	Med8	ENSMUST00000130421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006392	Med8	ENSMUST00000152633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006392	Med8	ENSMUST00000106384	ENSMUSP00000101992	TRANSLATION	protein_coding	-	CCDS18548.1	1	234	0	0	0.5	264.1	0	-4,-5	-	-	3.81	MINOR
ENSMUSG00000006392	Med8	ENSMUST00000084319	ENSMUSP00000081346	TRANSLATION	protein_coding	-	CCDS71459.1	1	179	0	0	7.3	152.7	0	-4,-6	-	-	2.223	MINOR
ENSMUSG00000006392	Med8	ENSMUST00000073881	ENSMUSP00000073544	TRANSLATION	protein_coding	-	-	1	129	0	0	0	143.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000006392	Med8	ENSMUST00000019229	ENSMUSP00000019229	TRANSLATION	protein_coding	-	CCDS38854.1	1	268	0	0	9.5	300.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000006392	Med8	ENSMUST00000126089	ENSMUSP00000123622	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006392	Med8	ENSMUST00000144577	ENSMUSP00000120158	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	97.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000107034	ENSMUSP00000102649	TRANSLATION	protein_coding	-	-	5	1531	0	20.631	0	395	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000141965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061859	Patj	ENSMUST00000030290	ENSMUSP00000030290	TRANSLATION	protein_coding	-	CCDS18377.1	1	582	0	10.381	0.5	221.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000136675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061859	Patj	ENSMUST00000041284	ENSMUSP00000049176	TRANSLATION	protein_coding	-	CCDS18375.1	1	1834	0	26.711	1.5	570.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000061859	Patj	ENSMUST00000102792	ENSMUSP00000099854	TRANSLATION	protein_coding	-	CCDS18376.1	1	612	0	10.481	1.5	221.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000135606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061859	Patj	ENSMUST00000107033	ENSMUSP00000102648	TRANSLATION	protein_coding	-	-	1	902	0	13.036	0	284.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000238306	ENSMUSP00000158719	TRANSLATION	protein_coding	-	-	-	1858	0	26.711	0	570.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000061859	Patj	ENSMUST00000107029	ENSMUSP00000102644	TRANSLATION	protein_coding	-	-	1	1261	0	17.715	0	317.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000142103	ENSMUSP00000116021	TRANSLATION	protein_coding	start	-	1	454	0	4.276	0	65.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000141796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061859	Patj	ENSMUST00000134901	ENSMUSP00000115936	TRANSLATION	protein_coding	start	-	5	173	0	3.29	0	58.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061859	Patj	ENSMUST00000107030	ENSMUSP00000102645	TRANSLATION	protein_coding	-	-	1	598	0	9.18	0	226.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000062064	Slc2a7	ENSMUST00000059893	ENSMUSP00000059106	TRANSLATION	protein_coding	-	CCDS51385.1	5	525	0	9.75	0.5	395.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062064	Slc2a7	ENSMUST00000133379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028249	Sdcbp	ENSMUST00000175769	ENSMUSP00000135777	TRANSLATION	protein_coding	stop	-	5	249	0	3.5	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028249	Sdcbp	ENSMUST00000108371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028249	Sdcbp	ENSMUST00000140830	ENSMUSP00000122411	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028249	Sdcbp	ENSMUST00000029912	ENSMUSP00000029912	TRANSLATION	protein_coding	-	CCDS51110.1	1	299	0	5	6.1	77.5	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028249	Sdcbp	ENSMUST00000108374	ENSMUSP00000104011	TRANSLATION	protein_coding	-	-	1	199	0	2	0	50.4	0	-4,-5	-	-	3.9	MINOR
ENSMUSG00000028249	Sdcbp	ENSMUST00000153861	ENSMUSP00000119838	TRANSLATION	protein_coding	stop	-	5	209	0	2.5	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028249	Sdcbp	ENSMUST00000155247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028249	Sdcbp	ENSMUST00000103008	ENSMUSP00000100073	TRANSLATION	protein_coding	-	CCDS17951.1	1	298	0	5	3.9	77.5	0	-4,-5	-	-	13.138	PRINCIPAL:3
ENSMUSG00000096582	Gm13289	ENSMUST00000179158	ENSMUSP00000135952	TRANSLATION	protein_coding	-	CCDS57284.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000043924	Ncmap	ENSMUST00000105859	ENSMUSP00000101485	TRANSLATION	protein_coding	-	CCDS18784.1	1	100	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000043924	Ncmap	ENSMUST00000154518	ENSMUSP00000116389	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043924	Ncmap	ENSMUST00000105857	ENSMUSP00000101483	TRANSLATION	protein_coding	-	CCDS18784.1	1	100	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000043924	Ncmap	ENSMUST00000064481	ENSMUSP00000070780	TRANSLATION	protein_coding	-	CCDS18784.1	3	100	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000043924	Ncmap	ENSMUST00000105858	ENSMUSP00000101484	TRANSLATION	protein_coding	-	CCDS18784.1	1	100	0	0	7.5	0	2	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000043924	Ncmap	ENSMUST00000123632	ENSMUSP00000118237	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000043924	Ncmap	ENSMUST00000105860	ENSMUSP00000101486	TRANSLATION	protein_coding	-	CCDS57304.1	1	118	0	0	0.5	0	2	-4,-6	-	-	0	MINOR
ENSMUSG00000043924	Ncmap	ENSMUST00000134717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028520	4921539E11Rik	ENSMUST00000097944	ENSMUSP00000095557	TRANSLATION	protein_coding	-	-	1	283	0	0	0	376.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028520	4921539E11Rik	ENSMUST00000030245	ENSMUSP00000030245	TRANSLATION	protein_coding	-	CCDS51248.1	1	446	0	0	0.5	673.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028520	4921539E11Rik	ENSMUST00000168664	ENSMUSP00000131846	TRANSLATION	protein_coding	-	CCDS51247.1	1	345	0	0	0.5	517	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055373	Fut9	ENSMUST00000149875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055373	Fut9	ENSMUST00000084770	ENSMUSP00000081826	TRANSLATION	protein_coding	-	CCDS18011.1	1	359	8	0.2	15.8	363.9	1	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000055373	Fut9	ENSMUST00000108199	ENSMUSP00000103834	TRANSLATION	protein_coding	-	CCDS18011.1	1	359	8	0.2	15.8	363.9	1	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028631	Kcnq4	ENSMUST00000129478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028631	Kcnq4	ENSMUST00000030376	ENSMUSP00000030376	TRANSLATION	protein_coding	-	CCDS38865.1	5	696	0	8.04	6.3	388.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028976	Slc2a5	ENSMUST00000136610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028976	Slc2a5	ENSMUST00000151504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028976	Slc2a5	ENSMUST00000132426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028976	Slc2a5	ENSMUST00000030826	ENSMUSP00000030826	TRANSLATION	protein_coding	-	CCDS18968.1	1	501	0	11.08	3.9	456.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000028460	Sit1	ENSMUST00000123526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028460	Sit1	ENSMUST00000030180	ENSMUSP00000030180	TRANSLATION	protein_coding	-	CCDS18096.1	1	180	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000051276	Actrt2	ENSMUST00000060062	ENSMUSP00000050377	TRANSLATION	protein_coding	-	CCDS19014.1	-	377	24	1	7.5	376.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000083138	Cyp4a29	ENSMUST00000118278	ENSMUSP00000139717	TRANSLATION	protein_coding	-	CCDS80146.1	5	509	30	9.85	0.5	421.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041135	Ripk2	ENSMUST00000037035	ENSMUSP00000038833	TRANSLATION	protein_coding	-	CCDS17988.1	1	539	0	7.25	1.5	221.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041135	Ripk2	ENSMUST00000183871	ENSMUSP00000139381	TRANSLATION	nonsense_mediated_decay	-	-	1	315	0	6.25	0	153.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028766	Alpl	ENSMUST00000143757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028766	Alpl	ENSMUST00000139951	ENSMUSP00000125041	TRANSLATION	protein_coding	stop	-	2	216	6	4	0	232	0	0,-3	-	-	-1	MINOR
ENSMUSG00000028766	Alpl	ENSMUST00000153588	ENSMUSP00000116308	TRANSLATION	protein_coding	stop	-	3	157	3	3	0	140.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000028766	Alpl	ENSMUST00000030551	ENSMUSP00000030551	TRANSLATION	protein_coding	-	CCDS18821.1	1	524	12	9.45	1.5	599.7	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028766	Alpl	ENSMUST00000133473	ENSMUSP00000121548	TRANSLATION	protein_coding	stop	-	3	98	1	2	0	58.4	0	0,-3	-	-	-1	MINOR
ENSMUSG00000028766	Alpl	ENSMUST00000138463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028766	Alpl	ENSMUST00000133566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028766	Alpl	ENSMUST00000141451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000150467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000135003	ENSMUSP00000120813	TRANSLATION	protein_coding	start	-	1	1209	11	0.6	0	372	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042446	Zmym4	ENSMUST00000129028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000154821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000106108	ENSMUSP00000101714	TRANSLATION	protein_coding	-	CCDS51303.1	1	1549	15	0.6	5.1	372	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042446	Zmym4	ENSMUST00000151026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000152952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000123597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042446	Zmym4	ENSMUST00000152489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066037	Hnrnpr	ENSMUST00000105850	ENSMUSP00000101476	TRANSLATION	protein_coding	-	CCDS18805.1	1	632	0	9.06	1.5	145.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066037	Hnrnpr	ENSMUST00000134524	ENSMUSP00000119666	TRANSLATION	protein_coding	stop	-	5	270	0	5.86	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066037	Hnrnpr	ENSMUST00000182327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066037	Hnrnpr	ENSMUST00000084219	ENSMUSP00000081239	TRANSLATION	protein_coding	-	CCDS71495.1	1	531	0	6.68	2.5	145.4	0	-4,-5	-	-	7.242	MINOR
ENSMUSG00000066037	Hnrnpr	ENSMUST00000131671	ENSMUSP00000138263	TRANSLATION	protein_coding	-	CCDS71495.1	1	531	0	6.68	2.5	145.4	0	-4,-5	-	-	7.242	MINOR
ENSMUSG00000066037	Hnrnpr	ENSMUST00000148843	ENSMUSP00000138399	TRANSLATION	protein_coding	-	CCDS18805.1	1	632	0	9.06	1.5	145.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066037	Hnrnpr	ENSMUST00000145282	ENSMUSP00000138859	TRANSLATION	nonsense_mediated_decay	-	-	3	103	0	2.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066037	Hnrnpr	ENSMUST00000125696	ENSMUSP00000138190	TRANSLATION	protein_coding	stop	-	3	72	0	1.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066037	Hnrnpr	ENSMUST00000180855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066037	Hnrnpr	ENSMUST00000153505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066037	Hnrnpr	ENSMUST00000156259	ENSMUSP00000117096	TRANSLATION	protein_coding	stop	-	3	73	0	1.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028246	Faxc	ENSMUST00000123481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028246	Faxc	ENSMUST00000123319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028246	Faxc	ENSMUST00000124440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028246	Faxc	ENSMUST00000029908	ENSMUSP00000029908	TRANSLATION	protein_coding	-	CCDS51130.1	1	409	11	0	8.8	172.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028246	Faxc	ENSMUST00000155220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023433	Cela3b	ENSMUST00000102522	ENSMUSP00000099581	TRANSLATION	protein_coding	-	CCDS18817.1	1	269	11	5.75	6.6	232.4	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000023433	Cela3b	ENSMUST00000134565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040536	Necab1	ENSMUST00000108273	ENSMUSP00000103908	TRANSLATION	protein_coding	-	CCDS17982.1	1	352	4	0	4	64.2	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000040536	Necab1	ENSMUST00000041606	ENSMUSP00000038165	TRANSLATION	protein_coding	-	CCDS17982.1	1	352	4	0	4	64.2	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000040536	Necab1	ENSMUST00000141105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073834	Mup11	ENSMUST00000098046	ENSMUSP00000095654	TRANSLATION	protein_coding	-	CCDS51190.1	1	181	0	5.16	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073834	Mup11	ENSMUST00000154733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073834	Mup11	ENSMUST00000148206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073834	Mup11	ENSMUST00000084544	ENSMUSP00000081592	TRANSLATION	protein_coding	-	-	5	94	0	2.83	0	72.6	0	-4,-5	-	-	5.076	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000125393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035969	Rusc2	ENSMUST00000152322	ENSMUSP00000121298	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000035645	ENSMUSP00000038379	TRANSLATION	protein_coding	-	CCDS18092.1	1	1523	0	3.15	0.5	106.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035969	Rusc2	ENSMUST00000154754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035969	Rusc2	ENSMUST00000149556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035969	Rusc2	ENSMUST00000125399	ENSMUSP00000116700	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000150066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035969	Rusc2	ENSMUST00000146710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035969	Rusc2	ENSMUST00000131037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035969	Rusc2	ENSMUST00000131668	ENSMUSP00000118528	TRANSLATION	protein_coding	-	-	5	1462	0	3.15	0	75.2	0	-4,-5	-	-	10.146	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000173682	ENSMUSP00000133715	TRANSLATION	nonsense_mediated_decay	-	-	5	803	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000098106	ENSMUSP00000095710	TRANSLATION	protein_coding	-	CCDS18092.1	1	1523	0	3.15	0.5	106.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035969	Rusc2	ENSMUST00000135216	ENSMUSP00000115081	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000123447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035969	Rusc2	ENSMUST00000136360	ENSMUSP00000123431	TRANSLATION	protein_coding	stop	-	2	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000144911	ENSMUSP00000121762	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000139198	ENSMUSP00000121528	TRANSLATION	protein_coding	stop	-	2	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035969	Rusc2	ENSMUST00000149221	ENSMUSP00000134247	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035126	Wdr78	ENSMUST00000036451	ENSMUSP00000037588	TRANSLATION	protein_coding	-	-	5	611	0	0.64	0	0	0	-4,-2	-	-	0.75	MINOR
ENSMUSG00000035126	Wdr78	ENSMUST00000152647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035126	Wdr78	ENSMUST00000136355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035126	Wdr78	ENSMUST00000138960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035126	Wdr78	ENSMUST00000106868	ENSMUSP00000102481	TRANSLATION	protein_coding	-	CCDS38824.3	5	807	0	3.264	0.5	14.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035126	Wdr78	ENSMUST00000116316	ENSMUSP00000112018	TRANSLATION	nonsense_mediated_decay	-	-	2	611	0	0.64	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035126	Wdr78	ENSMUST00000148673	ENSMUSP00000119752	TRANSLATION	protein_coding	start	-	5	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035126	Wdr78	ENSMUST00000036557	ENSMUSP00000042272	TRANSLATION	protein_coding	-	-	5	320	0	1.52	0	0	0	-4,-5	-	-	2.514	MINOR
ENSMUSG00000078497	Zfp978	ENSMUST00000154154	ENSMUSP00000114248	TRANSLATION	protein_coding	stop	-	5	335	12	1.6	0	144.4	0	-4,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000078497	Zfp978	ENSMUST00000133078	ENSMUSP00000115135	TRANSLATION	protein_coding	stop	-	5	97	0	1	0	72.1	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000028789	Azin2	ENSMUST00000119354	ENSMUSP00000114086	TRANSLATION	protein_coding	-	CCDS80159.1	1	323	11	5.948	0.5	249.8	0	-4,-5	-	-	7.158	MINOR
ENSMUSG00000028789	Azin2	ENSMUST00000030581	ENSMUSP00000030581	TRANSLATION	protein_coding	-	CCDS18678.1	1	459	15	8.308	7.5	307.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028789	Azin2	ENSMUST00000143912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028789	Azin2	ENSMUST00000128820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028789	Azin2	ENSMUST00000106068	ENSMUSP00000101683	TRANSLATION	protein_coding	-	CCDS18678.1	5	459	15	8.308	7.5	307.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028789	Azin2	ENSMUST00000156739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028789	Azin2	ENSMUST00000147731	ENSMUSP00000122240	TRANSLATION	protein_coding	start/stop	-	5	233	11	4.664	0	194.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029076	Sdf4	ENSMUST00000149971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029076	Sdf4	ENSMUST00000105579	ENSMUSP00000101204	TRANSLATION	protein_coding	-	CCDS19054.1	1	361	13	0.84	2.9	47	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029076	Sdf4	ENSMUST00000097734	ENSMUSP00000095340	TRANSLATION	protein_coding	-	CCDS80198.1	1	218	5	0.6	0.5	32.1	0	0,-3	-	-	9.048	MINOR
ENSMUSG00000029076	Sdf4	ENSMUST00000124872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029076	Sdf4	ENSMUST00000105578	ENSMUSP00000101203	TRANSLATION	protein_coding	-	CCDS19054.1	1	361	13	0.84	2.9	47	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029076	Sdf4	ENSMUST00000050078	ENSMUSP00000053175	TRANSLATION	protein_coding	-	CCDS19054.1	1	361	13	0.84	2.9	47	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000046637	Ttc34	ENSMUST00000207854	ENSMUSP00000146409	TRANSLATION	protein_coding	-	-	5	1063	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046637	Ttc34	ENSMUST00000137684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046637	Ttc34	ENSMUST00000050220	ENSMUSP00000051782	TRANSLATION	protein_coding	-	CCDS19015.1	1	554	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000061298	Agbl4	ENSMUST00000106587	ENSMUSP00000102197	TRANSLATION	protein_coding	-	-	1	164	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061298	Agbl4	ENSMUST00000106592	ENSMUSP00000102202	TRANSLATION	protein_coding	-	CCDS71443.1	1	494	5	5.494	6.5	91.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000061298	Agbl4	ENSMUST00000080744	ENSMUSP00000079568	TRANSLATION	protein_coding	-	CCDS51263.1	1	463	5	5.494	0.5	91.8	0	-4,-5	-	-	17	MINOR
ENSMUSG00000061298	Agbl4	ENSMUST00000106589	ENSMUSP00000102199	TRANSLATION	protein_coding	stop	-	5	63	0	0.864	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061298	Agbl4	ENSMUST00000148038	ENSMUSP00000118551	TRANSLATION	protein_coding	start	-	5	277	5	3.82	0	91.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061298	Agbl4	ENSMUST00000142460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061298	Agbl4	ENSMUST00000154123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061298	Agbl4	ENSMUST00000136433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061298	Agbl4	ENSMUST00000106591	ENSMUSP00000102201	TRANSLATION	protein_coding	-	-	1	346	4	4.744	0	85.7	0	-4,-5	-	-	14.104	MINOR
ENSMUSG00000061298	Agbl4	ENSMUST00000097920	ENSMUSP00000095533	TRANSLATION	protein_coding	-	CCDS51264.1	1	540	5	5.494	0.5	91.8	0	-4,-5	-	-	17	MINOR
ENSMUSG00000029022	Miip	ENSMUST00000119975	ENSMUSP00000113897	TRANSLATION	protein_coding	-	-	1	389	0	0	0.5	462.9	0	-4,-7	-	-	5.412	ALTERNATIVE:2
ENSMUSG00000029022	Miip	ENSMUST00000156374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029022	Miip	ENSMUST00000172710	ENSMUSP00000134085	TRANSLATION	protein_coding	-	CCDS18923.2	5	387	0	0	1.5	472.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000029022	Miip	ENSMUST00000174081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029022	Miip	ENSMUST00000030886	ENSMUSP00000030886	TRANSLATION	protein_coding	-	CCDS18923.2	1	387	0	0	1.5	472.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000029022	Miip	ENSMUST00000141166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029022	Miip	ENSMUST00000173034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029022	Miip	ENSMUST00000141534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029020	Mfn2	ENSMUST00000134172	ENSMUSP00000123021	TRANSLATION	protein_coding	stop	-	3	213	8	4.21	0	49	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029020	Mfn2	ENSMUST00000105716	ENSMUSP00000101341	TRANSLATION	protein_coding	-	CCDS38965.1	1	757	15	11.23	19.5	330.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000029020	Mfn2	ENSMUST00000124646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029020	Mfn2	ENSMUST00000030884	ENSMUSP00000030884	TRANSLATION	protein_coding	-	CCDS38965.1	1	757	15	11.23	19.5	330.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000029020	Mfn2	ENSMUST00000150881	ENSMUSP00000117758	TRANSLATION	protein_coding	stop	-	3	97	0	1.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029020	Mfn2	ENSMUST00000105714	ENSMUSP00000101339	TRANSLATION	protein_coding	-	-	1	605	15	9.28	0	82.8	0	-4,-7	-	-	8.1	MINOR
ENSMUSG00000029020	Mfn2	ENSMUST00000105715	ENSMUSP00000101340	TRANSLATION	protein_coding	-	CCDS38965.1	1	757	15	11.23	19.5	330.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000040945	Rcc2	ENSMUST00000038893	ENSMUSP00000038144	TRANSLATION	protein_coding	-	CCDS18852.1	1	520	0	5.295	4.1	180.8	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000040945	Rcc2	ENSMUST00000138808	ENSMUSP00000117448	TRANSLATION	protein_coding	stop	-	2	170	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040945	Rcc2	ENSMUST00000138682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040945	Rcc2	ENSMUST00000129838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040945	Rcc2	ENSMUST00000071169	ENSMUSP00000071163	TRANSLATION	protein_coding	-	CCDS18852.1	1	520	0	5.295	4.1	180.8	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000066030	Oog2	ENSMUST00000143978	ENSMUSP00000115150	TRANSLATION	protein_coding	stop	-	2	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066030	Oog2	ENSMUST00000141847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066030	Oog2	ENSMUST00000080405	ENSMUSP00000079267	TRANSLATION	protein_coding	-	CCDS18901.1	1	476	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000066030	Oog2	ENSMUST00000129781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028274	Rngtt	ENSMUST00000130138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028274	Rngtt	ENSMUST00000029942	ENSMUSP00000029942	TRANSLATION	protein_coding	-	CCDS84712.1	1	581	18	13.75	0.5	352.5	0	-4,-2	-	-	14.952	MINOR
ENSMUSG00000028274	Rngtt	ENSMUST00000155397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028274	Rngtt	ENSMUST00000146870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028274	Rngtt	ENSMUST00000108153	ENSMUSP00000103788	TRANSLATION	protein_coding	-	CCDS38705.1	1	597	18	14.74	1.5	370.3	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034926	Dhcr24	ENSMUST00000047973	ENSMUSP00000038063	TRANSLATION	protein_coding	-	CCDS18420.1	1	516	0	2.56	10	52.4	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000049225	Pdp1	ENSMUST00000108301	ENSMUSP00000103936	TRANSLATION	protein_coding	-	-	1	597	12	1	3.4	122.9	0	-4,-2	-	-	18.924	MINOR
ENSMUSG00000049225	Pdp1	ENSMUST00000095144	ENSMUSP00000092766	TRANSLATION	protein_coding	-	CCDS51121.1	5	563	12	1	8.8	122.9	0	-4,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000049225	Pdp1	ENSMUST00000108299	ENSMUSP00000103934	TRANSLATION	protein_coding	-	CCDS51121.1	2	563	12	1	8.8	122.9	0	-4,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000049225	Pdp1	ENSMUST00000056050	ENSMUSP00000050521	TRANSLATION	protein_coding	-	CCDS38694.1	5	538	12	1	7.6	122.9	0	-4,-7	-	-	20.538	PRINCIPAL:3
ENSMUSG00000049225	Pdp1	ENSMUST00000108302	ENSMUSP00000103937	TRANSLATION	protein_coding	-	CCDS71345.1	3	578	12	1	1.5	122.9	0	-4,-1	-	-	18.192	MINOR
ENSMUSG00000049225	Pdp1	ENSMUST00000108297	ENSMUSP00000103932	TRANSLATION	protein_coding	-	CCDS38694.1	1	538	12	1	7.6	122.9	0	-4,-7	-	-	20.538	PRINCIPAL:3
ENSMUSG00000008489	Elavl2	ENSMUST00000177109	ENSMUSP00000135780	TRANSLATION	protein_coding	stop	-	3	125	0	3.73	0	77.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000176469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008489	Elavl2	ENSMUST00000008633	ENSMUSP00000008633	TRANSLATION	protein_coding	-	CCDS18355.1	1	360	0	6.53	10.8	221.5	0	-4,-5	-	-	14.404	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000107124	ENSMUSP00000102741	TRANSLATION	protein_coding	-	CCDS51230.1	1	359	0	6.53	6.3	221.5	0	-4,-5	-	-	13.12	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000107109	ENSMUSP00000102726	TRANSLATION	protein_coding	-	CCDS51230.1	5	359	0	6.53	6.3	221.5	0	-4,-5	-	-	13.12	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000107120	ENSMUSP00000102737	TRANSLATION	protein_coding	-	CCDS84753.1	5	388	0	6.53	15	221.5	0	-2,-6	-	-	15.604	PRINCIPAL:2
ENSMUSG00000008489	Elavl2	ENSMUST00000176151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008489	Elavl2	ENSMUST00000107116	ENSMUSP00000102733	TRANSLATION	protein_coding	-	-	5	389	0	6.53	15	221.5	0	-2,-6	-	-	15.604	ALTERNATIVE:1
ENSMUSG00000008489	Elavl2	ENSMUST00000144769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008489	Elavl2	ENSMUST00000107111	ENSMUSP00000102728	TRANSLATION	protein_coding	-	-	5	346	0	6.53	2.9	221.5	0	-4,-5	-	-	12.148	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000107110	ENSMUSP00000102727	TRANSLATION	protein_coding	-	CCDS18356.1	1	347	0	6.53	2.9	221.5	0	-4,-5	-	-	12.148	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000128599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008489	Elavl2	ENSMUST00000102799	ENSMUSP00000099863	TRANSLATION	protein_coding	-	CCDS18354.1	1	373	0	6.728	5.1	221.5	0	-4,-6	-	-	13.172	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000176362	ENSMUSP00000135038	TRANSLATION	protein_coding	stop	-	3	23	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000107118	ENSMUSP00000102735	TRANSLATION	protein_coding	-	-	5	376	0	6.53	6.1	221.5	0	-2,-6	-	-	13.06	MINOR
ENSMUSG00000008489	Elavl2	ENSMUST00000147611	ENSMUSP00000117770	TRANSLATION	protein_coding	stop	-	3	83	0	1.48	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000029070	Mxra8	ENSMUST00000132142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029070	Mxra8	ENSMUST00000141766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029070	Mxra8	ENSMUST00000141883	ENSMUSP00000114929	TRANSLATION	protein_coding	stop	-	2	311	0	0.6	0	106.6	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029070	Mxra8	ENSMUST00000030947	ENSMUSP00000030947	TRANSLATION	protein_coding	-	CCDS19044.1	1	442	0	0.6	5.1	106.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029070	Mxra8	ENSMUST00000126487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029070	Mxra8	ENSMUST00000143886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029070	Mxra8	ENSMUST00000133592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038668	Lpar1	ENSMUST00000107570	ENSMUSP00000103196	TRANSLATION	protein_coding	-	CCDS71391.1	1	346	0	3.18	4	130.5	7	-4,-7	-	-	12.13	MINOR
ENSMUSG00000038668	Lpar1	ENSMUST00000147354	ENSMUSP00000123694	TRANSLATION	protein_coding	stop	-	2	56	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038668	Lpar1	ENSMUST00000155170	ENSMUSP00000121440	TRANSLATION	protein_coding	stop	-	5	75	0	2.08	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000038668	Lpar1	ENSMUST00000055018	ENSMUSP00000052581	TRANSLATION	protein_coding	-	CCDS18212.1	1	364	0	3.68	6.3	130.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038668	Lpar1	ENSMUST00000107575	ENSMUSP00000103201	TRANSLATION	protein_coding	-	CCDS18212.1	1	364	0	3.68	6.3	130.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038668	Lpar1	ENSMUST00000107571	ENSMUSP00000103197	TRANSLATION	protein_coding	-	CCDS18212.1	5	364	0	3.68	6.3	130.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038668	Lpar1	ENSMUST00000107574	ENSMUSP00000103200	TRANSLATION	protein_coding	-	CCDS18212.1	5	364	0	3.68	6.3	130.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038668	Lpar1	ENSMUST00000145361	ENSMUSP00000116856	TRANSLATION	protein_coding	stop	-	2	45	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035551	Igfbpl1	ENSMUST00000044297	ENSMUSP00000036974	TRANSLATION	protein_coding	-	CCDS38756.1	1	270	0	2.48	1.5	101	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035551	Igfbpl1	ENSMUST00000145102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028328	Tmod1	ENSMUST00000155730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028328	Tmod1	ENSMUST00000136553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028328	Tmod1	ENSMUST00000156200	ENSMUSP00000134075	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	48.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028328	Tmod1	ENSMUST00000107773	ENSMUSP00000103402	TRANSLATION	protein_coding	-	CCDS18143.1	5	359	0	7.48	16.2	205	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028328	Tmod1	ENSMUST00000128689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060491	4930522H14Rik	ENSMUST00000082306	ENSMUSP00000080923	TRANSLATION	protein_coding	-	CCDS57290.1	1	226	0	0	0.5	337.3	1	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000060491	4930522H14Rik	ENSMUST00000102725	ENSMUSP00000099786	TRANSLATION	protein_coding	-	CCDS18465.1	1	230	0	0	1.5	337.3	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000095048	Gm11239	ENSMUST00000171348	ENSMUSP00000125805	TRANSLATION	protein_coding	-	-	5	360	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095048	Gm11239	ENSMUST00000179977	ENSMUSP00000136176	TRANSLATION	protein_coding	start	-	5	359	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028750	Pla2g2c	ENSMUST00000105808	ENSMUSP00000101434	TRANSLATION	protein_coding	-	CCDS18831.1	5	150	5	2.915	0.5	122.5	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000028750	Pla2g2c	ENSMUST00000030530	ENSMUSP00000030530	TRANSLATION	protein_coding	-	CCDS18831.1	3	150	5	2.915	0.5	122.5	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000028750	Pla2g2c	ENSMUST00000124660	ENSMUSP00000124341	TRANSLATION	protein_coding	stop	-	3	128	5	2.6	0	117.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000073747	Zpld2	ENSMUST00000097849	ENSMUSP00000095461	TRANSLATION	protein_coding	-	CCDS38911.1	1	679	0	2.02	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000066152	Slc31a2	ENSMUST00000084530	ENSMUSP00000081578	TRANSLATION	protein_coding	-	CCDS18236.1	1	143	0	0	5.1	103.6	1	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000066152	Slc31a2	ENSMUST00000107468	ENSMUSP00000103092	TRANSLATION	protein_coding	-	CCDS71401.1	5	141	0	0	5.1	103.6	1	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000066152	Slc31a2	ENSMUST00000107467	ENSMUSP00000103091	TRANSLATION	protein_coding	-	CCDS71401.1	1	141	0	0	5.1	103.6	1	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000070999	Ccin	ENSMUST00000095107	ENSMUSP00000092725	TRANSLATION	protein_coding	-	CCDS18118.1	-	588	0	0.2	7.5	184	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101252	Ifna6	ENSMUST00000105146	ENSMUSP00000100777	TRANSLATION	protein_coding	-	CCDS38811.1	-	189	3	1	3.9	211.3	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000028413	B4galt1	ENSMUST00000108096	ENSMUSP00000103731	TRANSLATION	protein_coding	-	-	1	346	17	3.4	0	281.4	1	-4,-1	-	-	6.654	MINOR
ENSMUSG00000028413	B4galt1	ENSMUST00000030121	ENSMUSP00000030121	TRANSLATION	protein_coding	-	CCDS18051.1	1	399	27	5.4	6.3	303.8	1	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000050511	Oprd1	ENSMUST00000056336	ENSMUSP00000050077	TRANSLATION	protein_coding	-	CCDS18718.1	1	372	0	3	3.9	193.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000028407	Smim27	ENSMUST00000129758	ENSMUSP00000146567	TRANSLATION	protein_coding	-	-	1	49	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028407	Smim27	ENSMUST00000207780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029034	Ints11	ENSMUST00000120794	ENSMUSP00000112656	TRANSLATION	protein_coding	-	-	5	578	7	11.6	0	185.3	0	-4,-6	-	-	16.05	MINOR
ENSMUSG00000029034	Ints11	ENSMUST00000135844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029034	Ints11	ENSMUST00000156460	ENSMUSP00000118803	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	1.69	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029034	Ints11	ENSMUST00000030901	ENSMUSP00000030901	TRANSLATION	protein_coding	-	CCDS19048.1	1	600	8	12.2	17	185.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000029034	Ints11	ENSMUST00000149458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029034	Ints11	ENSMUST00000134678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029034	Ints11	ENSMUST00000132632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028636	Ppcs	ENSMUST00000106316	ENSMUSP00000101923	TRANSLATION	protein_coding	-	-	1	138	0	2	5.1	0	0	-4,-6	-	-	5.58	MINOR
ENSMUSG00000028636	Ppcs	ENSMUST00000140641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028636	Ppcs	ENSMUST00000030385	ENSMUSP00000030385	TRANSLATION	protein_coding	-	CCDS18581.1	1	311	1	3	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000065990	Aurkaip1	ENSMUST00000105592	ENSMUSP00000101217	TRANSLATION	protein_coding	-	CCDS19043.1	2	200	0	2.9	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000065990	Aurkaip1	ENSMUST00000084097	ENSMUSP00000081114	TRANSLATION	protein_coding	-	CCDS19043.1	1	200	0	2.9	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000065990	Aurkaip1	ENSMUST00000139651	ENSMUSP00000117870	TRANSLATION	protein_coding	stop	-	2	147	0	1.4	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000065990	Aurkaip1	ENSMUST00000129711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000065990	Aurkaip1	ENSMUST00000151222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065990	Aurkaip1	ENSMUST00000105591	ENSMUSP00000101216	TRANSLATION	protein_coding	-	CCDS19043.1	3	200	0	2.9	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000096705	Olfr1329	ENSMUST00000071979	ENSMUSP00000071870	TRANSLATION	protein_coding	-	CCDS18566.1	-	313	0	0.42	4	185.5	0	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073774	Kncn	ENSMUST00000128222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073774	Kncn	ENSMUST00000097918	ENSMUSP00000095531	TRANSLATION	protein_coding	-	CCDS18499.1	1	124	0	0	7.5	243.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000124251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000140108	ENSMUSP00000119151	TRANSLATION	protein_coding	start	-	3	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000076541	ENSMUSP00000075856	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000126416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000144099	ENSMUSP00000119891	TRANSLATION	protein_coding	-	CCDS38779.1	1	1822	0	0	0.5	80.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039298	Cdk5rap2	ENSMUST00000138561	ENSMUSP00000116928	TRANSLATION	protein_coding	start/stop	-	5	390	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028756	Pink1	ENSMUST00000105817	ENSMUSP00000101443	TRANSLATION	protein_coding	-	-	5	550	0	3	0	82.3	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028756	Pink1	ENSMUST00000030536	ENSMUSP00000030536	TRANSLATION	protein_coding	-	CCDS18825.1	1	580	0	3	0.5	82.3	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000028756	Pink1	ENSMUST00000105816	ENSMUSP00000101442	TRANSLATION	protein_coding	-	-	1	168	0	0.84	0	29.7	0	-4,-5	-	-	3.846	MINOR
ENSMUSG00000078683	Mup1	ENSMUST00000084548	ENSMUSP00000081596	TRANSLATION	protein_coding	-	CCDS51188.1	3	235	0	5.13	0.5	109.6	0	4,-1	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000078683	Mup1	ENSMUST00000135953	ENSMUSP00000118299	TRANSLATION	protein_coding	start	-	2	30	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078683	Mup1	ENSMUST00000107499	ENSMUSP00000103123	TRANSLATION	protein_coding	-	CCDS18231.1	2	180	0	5.16	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000078683	Mup1	ENSMUST00000103012	ENSMUSP00000100077	TRANSLATION	protein_coding	-	CCDS18231.1	1	180	0	5.16	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000028580	Pum1	ENSMUST00000030315	ENSMUSP00000030315	TRANSLATION	protein_coding	-	CCDS18710.1	1	1189	0	8	11.5	225.6	0	-4,-7	-	-	14.898	PRINCIPAL:3
ENSMUSG00000028580	Pum1	ENSMUST00000097862	ENSMUSP00000095474	TRANSLATION	protein_coding	-	CCDS51312.1	1	1188	0	8	10.3	225.6	0	-4,-7	-	-	14.556	ALTERNATIVE:1
ENSMUSG00000028580	Pum1	ENSMUST00000105991	ENSMUSP00000101612	TRANSLATION	protein_coding	-	CCDS51314.1	1	944	0	8	5.2	227.3	0	-4,-7	-	-	13.2	MINOR
ENSMUSG00000028580	Pum1	ENSMUST00000122847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028580	Pum1	ENSMUST00000143277	ENSMUSP00000114629	TRANSLATION	protein_coding	stop	-	5	218	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028580	Pum1	ENSMUST00000105992	ENSMUSP00000101613	TRANSLATION	protein_coding	-	CCDS51313.1	1	1092	0	8	8.4	225.6	0	-4,-7	-	-	14.013	ALTERNATIVE:1
ENSMUSG00000028580	Pum1	ENSMUST00000097864	ENSMUSP00000095476	TRANSLATION	protein_coding	-	CCDS51311.1	1	1186	0	8	10.3	227.3	0	-4,-7	-	-	14.658	ALTERNATIVE:1
ENSMUSG00000028647	Mycbp	ENSMUST00000137685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028647	Mycbp	ENSMUST00000106202	ENSMUSP00000101808	TRANSLATION	protein_coding	-	-	1	146	0	1.3	0	0	0	-4,-6	-	-	4.872	MINOR
ENSMUSG00000028647	Mycbp	ENSMUST00000147340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028647	Mycbp	ENSMUST00000030400	ENSMUSP00000030400	TRANSLATION	protein_coding	-	CCDS18621.1	1	103	0	1.6	11.8	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000003038	Hmgn2	ENSMUST00000105893	ENSMUSP00000101513	TRANSLATION	protein_coding	-	-	3	96	0	0	0	103.7	0	-4,-5	-	-	5.418	MINOR
ENSMUSG00000003038	Hmgn2	ENSMUST00000153622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003038	Hmgn2	ENSMUST00000102552	ENSMUSP00000099612	TRANSLATION	protein_coding	-	CCDS18759.1	2	90	0	0	15	113.4	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000003038	Hmgn2	ENSMUST00000145025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003038	Hmgn2	ENSMUST00000125266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003038	Hmgn2	ENSMUST00000136859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003038	Hmgn2	ENSMUST00000138458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003038	Hmgn2	ENSMUST00000123234	ENSMUSP00000120795	TRANSLATION	protein_coding	start	-	3	112	0	0	0	103.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003038	Hmgn2	ENSMUST00000130809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003038	Hmgn2	ENSMUST00000136327	ENSMUSP00000114704	TRANSLATION	protein_coding	-	-	2	109	0	0	0	103.3	0	-4,-5	-	-	5.394	MINOR
ENSMUSG00000003038	Hmgn2	ENSMUST00000137456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003038	Hmgn2	ENSMUST00000102553	ENSMUSP00000099613	TRANSLATION	protein_coding	-	CCDS18759.1	1	90	0	0	15	113.4	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000003038	Hmgn2	ENSMUST00000100472	ENSMUSP00000098040	TRANSLATION	protein_coding	-	-	2	92	0	0	13	108.8	0	-4,-5	-	-	9.152	ALTERNATIVE:1
ENSMUSG00000041261	Car8	ENSMUST00000066674	ENSMUSP00000063511	TRANSLATION	protein_coding	-	CCDS17954.1	1	291	6	7.25	1.7	270.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028347	Tmeff1	ENSMUST00000130834	ENSMUSP00000121740	TRANSLATION	protein_coding	start	-	1	346	0	3.9366	0	75.2	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000028347	Tmeff1	ENSMUST00000141720	ENSMUSP00000118581	TRANSLATION	protein_coding	start	-	5	151	0	1.49	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000028347	Tmeff1	ENSMUST00000123476	ENSMUSP00000115841	TRANSLATION	protein_coding	-	CCDS18168.1	1	372	0	4.0566	1.5	75.2	3	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028347	Tmeff1	ENSMUST00000030032	ENSMUSP00000030032	TRANSLATION	protein_coding	-	CCDS18168.1	1	372	0	4.0566	1.5	75.2	3	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028447	Dctn3	ENSMUST00000171641	ENSMUSP00000130988	TRANSLATION	protein_coding	-	CCDS51143.1	3	159	0	0	0.5	145.9	0	-4,-5	-	-	3.072	MINOR
ENSMUSG00000028447	Dctn3	ENSMUST00000147120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028447	Dctn3	ENSMUST00000030158	ENSMUSP00000030158	TRANSLATION	protein_coding	-	CCDS18069.1	1	186	0	0	8.8	194.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000037553	Zdhhc18	ENSMUST00000138639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037553	Zdhhc18	ENSMUST00000146464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037553	Zdhhc18	ENSMUST00000084238	ENSMUSP00000081260	TRANSLATION	protein_coding	-	CCDS38906.1	2	380	5	0	1.7	127.4	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000037553	Zdhhc18	ENSMUST00000142382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037553	Zdhhc18	ENSMUST00000135999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028357	Kif12	ENSMUST00000156618	ENSMUSP00000152690	TRANSLATION	protein_coding	-	-	5	643	11	8.096	0.5	298.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028357	Kif12	ENSMUST00000154234	ENSMUSP00000152856	TRANSLATION	nonsense_mediated_decay	start	-	5	95	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028357	Kif12	ENSMUST00000124739	ENSMUSP00000152245	TRANSLATION	nonsense_mediated_decay	-	-	5	176	10	3.6508	0	87.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028357	Kif12	ENSMUST00000131760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028357	Kif12	ENSMUST00000030042	ENSMUSP00000030042	TRANSLATION	protein_coding	-	CCDS18249.1	1	642	11	8.096	0.5	298.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028655	Mfsd2a	ENSMUST00000127047	ENSMUSP00000116782	TRANSLATION	protein_coding	stop	-	2	106	0	0	0	61.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028655	Mfsd2a	ENSMUST00000152308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028655	Mfsd2a	ENSMUST00000138964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028655	Mfsd2a	ENSMUST00000030408	ENSMUSP00000030408	TRANSLATION	protein_coding	-	CCDS18605.1	1	534	0	1.99	1.5	424.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035683	Melk	ENSMUST00000137703	ENSMUSP00000120242	TRANSLATION	protein_coding	stop	-	5	214	15	6.5	0	168.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035683	Melk	ENSMUST00000137759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035683	Melk	ENSMUST00000045607	ENSMUSP00000043806	TRANSLATION	protein_coding	-	CCDS18124.1	1	643	18	9.75	1.5	298.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035683	Melk	ENSMUST00000125708	ENSMUSP00000118359	TRANSLATION	protein_coding	stop	-	5	133	9	4	0	97.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028676	Srsf10	ENSMUST00000129718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028676	Srsf10	ENSMUST00000102544	ENSMUSP00000099603	TRANSLATION	protein_coding	-	CCDS71494.1	1	182	0	2.84	7.5	70.6	0	-4,-2	-	-	13.989	ALTERNATIVE:1
ENSMUSG00000028676	Srsf10	ENSMUST00000149878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028676	Srsf10	ENSMUST00000154447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028676	Srsf10	ENSMUST00000030438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028676	Srsf10	ENSMUST00000105853	ENSMUSP00000101479	TRANSLATION	protein_coding	-	CCDS38922.1	1	262	0	2.84	10.8	70.6	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000028676	Srsf10	ENSMUST00000142002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028676	Srsf10	ENSMUST00000126641	ENSMUSP00000114564	TRANSLATION	protein_coding	-	CCDS18791.1	1	183	0	2.84	7.5	70.6	0	-4,-2	-	-	13.989	PRINCIPAL:3
ENSMUSG00000028676	Srsf10	ENSMUST00000097844	ENSMUSP00000095455	TRANSLATION	protein_coding	-	CCDS71493.1	2	261	0	2.84	10.8	70.6	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000028676	Srsf10	ENSMUST00000129198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028893	Sesn2	ENSMUST00000030724	ENSMUSP00000030724	TRANSLATION	protein_coding	-	CCDS18726.1	1	480	0	9.5	1.5	656.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024903	Lao1	ENSMUST00000058651	ENSMUSP00000062834	TRANSLATION	protein_coding	-	CCDS18568.1	1	523	33	5.55	0.5	248	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024903	Lao1	ENSMUST00000142457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066137	Gm11487	ENSMUST00000084480	ENSMUSP00000081520	TRANSLATION	protein_coding	-	CCDS51205.1	1	354	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000066137	Gm11487	ENSMUST00000147434	ENSMUSP00000121561	TRANSLATION	protein_coding	start	-	5	111	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058046	4933430I17Rik	ENSMUST00000062145	ENSMUSP00000050465	TRANSLATION	protein_coding	-	CCDS18245.1	1	495	0	0	0.5	594.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046593	Tmem215	ENSMUST00000179526	ENSMUSP00000136595	TRANSLATION	protein_coding	-	CCDS18046.1	1	235	0	0	7.5	377.8	2	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000046593	Tmem215	ENSMUST00000049655	ENSMUSP00000052129	TRANSLATION	protein_coding	-	CCDS18046.1	1	235	0	0	7.5	377.8	2	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000003282	Plag1	ENSMUST00000147035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003282	Plag1	ENSMUST00000151543	ENSMUSP00000119937	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003282	Plag1	ENSMUST00000137439	ENSMUSP00000117532	TRANSLATION	nonsense_mediated_decay	-	-	2	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003282	Plag1	ENSMUST00000003369	ENSMUSP00000003369	TRANSLATION	protein_coding	-	CCDS17941.1	1	499	27	0.8	10.4	60.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001985	Grik3	ENSMUST00000030676	ENSMUSP00000030676	TRANSLATION	protein_coding	-	CCDS38878.1	1	919	0	15.1	10.8	579	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000033985	Tesk2	ENSMUST00000045542	ENSMUSP00000041009	TRANSLATION	protein_coding	-	CCDS18516.1	1	570	21	5.615	3.9	167.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000033985	Tesk2	ENSMUST00000106456	ENSMUSP00000102064	TRANSLATION	protein_coding	-	-	5	541	21	5.165	0	152.5	0	-4,-6	-	-	16.206	MINOR
ENSMUSG00000033985	Tesk2	ENSMUST00000106459	ENSMUSP00000102067	TRANSLATION	protein_coding	-	-	1	319	21	4.145	0	129	0	-4,-6	-	-	12.756	MINOR
ENSMUSG00000033985	Tesk2	ENSMUST00000142529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057021	Vmn2r-ps159	ENSMUST00000074107	ENSMUSP00000157509	TRANSLATION	protein_coding	-	-	1	436	0	1.27	0.5	126.5	0	4,-1	-	-	2.202	MINOR
ENSMUSG00000057021	Vmn2r-ps159	ENSMUST00000189559	ENSMUSP00000158497	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000057021	Vmn2r-ps159	ENSMUST00000096792	ENSMUSP00000157307	TRANSLATION	protein_coding	-	-	-	850	4	3.17	0.5	398.1	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000078584	AU022252	ENSMUST00000141112	ENSMUSP00000115729	TRANSLATION	protein_coding	-	CCDS18575.1	1	199	0	0	0.5	249.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078584	AU022252	ENSMUST00000132778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078584	AU022252	ENSMUST00000144309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078584	AU022252	ENSMUST00000046260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044303	Cdkn2a	ENSMUST00000107131	ENSMUSP00000102748	TRANSLATION	protein_coding	-	CCDS18350.1	1	169	0	1	0.5	79	0	-4,0	-	-	9	MINOR
ENSMUSG00000044303	Cdkn2a	ENSMUST00000060501	ENSMUSP00000061847	TRANSLATION	protein_coding	-	CCDS38812.1	1	168	0	2	0.5	28.9	0	-4,-2	-	-	8.196	PRINCIPAL:1
ENSMUSG00000073794	I0C0044D17Rik	ENSMUST00000097964	ENSMUSP00000095577	TRANSLATION	protein_coding	-	-	1	169	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073794	I0C0044D17Rik	ENSMUST00000168045	ENSMUSP00000130110	TRANSLATION	protein_coding	-	-	-	169	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073764	Gm12888	ENSMUST00000097905	ENSMUSP00000095515	TRANSLATION	protein_coding	-	CCDS38867.1	1	119	0	1.3	0.5	27.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028582	Cc2d1b	ENSMUST00000126156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028582	Cc2d1b	ENSMUST00000176846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028582	Cc2d1b	ENSMUST00000176877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028582	Cc2d1b	ENSMUST00000150199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028582	Cc2d1b	ENSMUST00000030320	ENSMUSP00000030320	TRANSLATION	protein_coding	-	CCDS18454.1	1	848	0	0	1.5	38.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028582	Cc2d1b	ENSMUST00000134844	ENSMUSP00000123277	TRANSLATION	protein_coding	start	-	1	770	0	0	0	38.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028582	Cc2d1b	ENSMUST00000139962	ENSMUSP00000135399	TRANSLATION	nonsense_mediated_decay	start	-	3	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028582	Cc2d1b	ENSMUST00000106665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028582	Cc2d1b	ENSMUST00000143336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028318	Polr1e	ENSMUST00000153252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028318	Polr1e	ENSMUST00000150663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028318	Polr1e	ENSMUST00000107814	ENSMUSP00000103444	TRANSLATION	protein_coding	-	-	1	393	0	3.54	0	302.7	0	-4,-5	-	-	9.714	MINOR
ENSMUSG00000028318	Polr1e	ENSMUST00000029999	ENSMUSP00000029999	TRANSLATION	protein_coding	-	CCDS71378.1	1	482	0	3.66	0.5	318.8	0	-4,-5	-	-	10.92	MINOR
ENSMUSG00000028318	Polr1e	ENSMUST00000054723	ENSMUSP00000059941	TRANSLATION	protein_coding	start	-	5	407	0	3.66	0	336.8	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000028318	Polr1e	ENSMUST00000133157	ENSMUSP00000121007	TRANSLATION	protein_coding	-	CCDS18131.1	1	434	0	3.66	1.5	336.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028318	Polr1e	ENSMUST00000149284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100079	Ifnab	ENSMUST00000071378	ENSMUSP00000071333	TRANSLATION	protein_coding	-	CCDS18327.1	-	190	3	1	1.5	210.8	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000078747	Gm20878	ENSMUST00000108027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078747	Gm20878	ENSMUST00000151103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078747	Gm20878	ENSMUST00000181518	ENSMUSP00000137739	TRANSLATION	protein_coding	-	CCDS57268.1	1	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000078747	Gm20878	ENSMUST00000108028	ENSMUSP00000103663	TRANSLATION	protein_coding	-	-	5	103	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078747	Gm20878	ENSMUST00000155656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078747	Gm20878	ENSMUST00000153997	ENSMUSP00000116356	TRANSLATION	protein_coding	-	CCDS57268.1	2	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000078747	Gm20878	ENSMUST00000145219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078747	Gm20878	ENSMUST00000123767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078487	Ankrd65	ENSMUST00000165000	ENSMUSP00000129173	TRANSLATION	protein_coding	start/stop	-	5	380	0	2.4	0	147.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000078487	Ankrd65	ENSMUST00000105593	ENSMUSP00000101218	TRANSLATION	protein_coding	stop	-	1	250	0	1.466	0	64.6	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000044288	Cnr1	ENSMUST00000084736	ENSMUSP00000081787	TRANSLATION	protein_coding	-	CCDS18025.1	2	473	0	1	9.5	150.4	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044288	Cnr1	ENSMUST00000133462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044288	Cnr1	ENSMUST00000057188	ENSMUSP00000055797	TRANSLATION	protein_coding	-	CCDS18025.1	1	473	0	1	9.5	150.4	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038330	C87499	ENSMUST00000134155	ENSMUSP00000138546	TRANSLATION	protein_coding	stop	-	1	140	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038330	C87499	ENSMUST00000053304	ENSMUSP00000056691	TRANSLATION	protein_coding	-	CCDS51221.1	1	493	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038330	C87499	ENSMUST00000156062	ENSMUSP00000138736	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038330	C87499	ENSMUST00000107143	ENSMUSP00000102761	TRANSLATION	protein_coding	-	-	5	195	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038330	C87499	ENSMUST00000107142	ENSMUSP00000102760	TRANSLATION	protein_coding	-	-	2	124	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000063800	Prpf38a	ENSMUST00000132951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063800	Prpf38a	ENSMUST00000079213	ENSMUSP00000078207	TRANSLATION	protein_coding	-	CCDS18452.1	1	312	0	4.75	13.6	238.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063800	Prpf38a	ENSMUST00000125106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033326	Kdm4a	ENSMUST00000097911	ENSMUSP00000095524	TRANSLATION	protein_coding	-	CCDS51282.1	1	1064	15	7.5	2.7	364.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033326	Kdm4a	ENSMUST00000050288	ENSMUSP00000062910	TRANSLATION	protein_coding	-	CCDS18545.1	1	1033	15	7.5	0.5	364.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000033326	Kdm4a	ENSMUST00000152808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033326	Kdm4a	ENSMUST00000106406	ENSMUSP00000102014	TRANSLATION	protein_coding	-	CCDS51282.1	1	1064	15	7.5	2.7	364.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033326	Kdm4a	ENSMUST00000106403	ENSMUSP00000102011	TRANSLATION	protein_coding	-	CCDS51282.1	1	1064	15	7.5	2.7	364.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033326	Kdm4a	ENSMUST00000164821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029062	Cdk11b	ENSMUST00000105598	ENSMUSP00000101223	TRANSLATION	protein_coding	-	CCDS84837.1	1	750	18	6.52	1.5	222.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029062	Cdk11b	ENSMUST00000135550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029062	Cdk11b	ENSMUST00000142513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029062	Cdk11b	ENSMUST00000105600	ENSMUSP00000101225	TRANSLATION	protein_coding	-	CCDS19033.1	5	784	18	6.52	1.5	222.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029062	Cdk11b	ENSMUST00000155100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029062	Cdk11b	ENSMUST00000149498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029062	Cdk11b	ENSMUST00000067081	ENSMUSP00000070527	TRANSLATION	protein_coding	-	CCDS19033.1	1	784	18	6.52	1.5	222.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029062	Cdk11b	ENSMUST00000143196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058183	Mmel1	ENSMUST00000080559	ENSMUSP00000079399	TRANSLATION	protein_coding	-	-	5	780	7	18.23	0	638.2	2	-2,-5	-	-	16.332	MINOR
ENSMUSG00000058183	Mmel1	ENSMUST00000131758	ENSMUSP00000121243	TRANSLATION	protein_coding	stop	-	3	150	0	3.75	0	135.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058183	Mmel1	ENSMUST00000129623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058183	Mmel1	ENSMUST00000079269	ENSMUSP00000078252	TRANSLATION	protein_coding	-	-	5	768	7	18.73	0.5	641.5	2	-2,-5	-	-	17.532	ALTERNATIVE:2
ENSMUSG00000058183	Mmel1	ENSMUST00000105635	ENSMUSP00000101260	TRANSLATION	protein_coding	-	-	5	745	7	18.73	0	641.5	2	-2,-5	-	-	17.532	ALTERNATIVE:2
ENSMUSG00000058183	Mmel1	ENSMUST00000163732	ENSMUSP00000131753	TRANSLATION	protein_coding	-	CCDS51401.1	1	766	7	18.73	0.5	649.3	2	-2,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000058183	Mmel1	ENSMUST00000105634	ENSMUSP00000101259	TRANSLATION	protein_coding	-	-	5	782	7	18.23	0	630.4	2	-2,-5	-	-	15.864	MINOR
ENSMUSG00000028758	Kif17	ENSMUST00000105821	ENSMUSP00000101447	TRANSLATION	protein_coding	-	CCDS57307.1	1	710	11	6.86	0.5	390.5	0	-4,-2	-	-	17.52	ALTERNATIVE:2
ENSMUSG00000028758	Kif17	ENSMUST00000030539	ENSMUSP00000030539	TRANSLATION	protein_coding	-	CCDS18823.1	1	1038	11	7.1	0.5	390.5	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000028758	Kif17	ENSMUST00000105820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028758	Kif17	ENSMUST00000105818	ENSMUSP00000101444	TRANSLATION	protein_coding	-	-	2	756	0	4.35	0	112.5	0	-4,-5	-	-	0.498	MINOR
ENSMUSG00000003731	Kpna6	ENSMUST00000003828	ENSMUSP00000003828	TRANSLATION	protein_coding	-	-	5	533	0	12.8	14	463	0	-4,-5	-	-	15.356	ALTERNATIVE:1
ENSMUSG00000003731	Kpna6	ENSMUST00000126010	ENSMUSP00000114265	TRANSLATION	protein_coding	stop	-	3	88	0	2.3	0	74.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003731	Kpna6	ENSMUST00000146215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003731	Kpna6	ENSMUST00000102590	ENSMUSP00000099650	TRANSLATION	protein_coding	-	CCDS18701.1	1	536	0	12.8	16.5	463	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000003731	Kpna6	ENSMUST00000138916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003731	Kpna6	ENSMUST00000146361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047777	Phf13	ENSMUST00000055688	ENSMUSP00000062590	TRANSLATION	protein_coding	-	CCDS51388.1	1	296	8	1	7.5	31.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040183	Ankrd6	ENSMUST00000035719	ENSMUSP00000041300	TRANSLATION	protein_coding	-	CCDS18018.1	1	712	0	7.89	1.5	134.7	0	-4,-5	-	-	10.962	PRINCIPAL:1
ENSMUSG00000040183	Ankrd6	ENSMUST00000149650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040183	Ankrd6	ENSMUST00000128496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040183	Ankrd6	ENSMUST00000084749	ENSMUSP00000081801	TRANSLATION	protein_coding	-	CCDS18018.1	5	712	0	7.89	1.5	134.7	0	-4,-5	-	-	10.962	PRINCIPAL:1
ENSMUSG00000040183	Ankrd6	ENSMUST00000108166	ENSMUSP00000103801	TRANSLATION	protein_coding	-	-	5	648	0	6.14	0	100.7	0	-4,-5	-	-	5.424	MINOR
ENSMUSG00000040183	Ankrd6	ENSMUST00000084748	ENSMUSP00000081800	TRANSLATION	protein_coding	-	-	5	677	0	7.57	0	152	0	-4,-5	-	-	11.358	MINOR
ENSMUSG00000040183	Ankrd6	ENSMUST00000140837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040183	Ankrd6	ENSMUST00000084750	ENSMUSP00000081802	TRANSLATION	protein_coding	-	CCDS18018.1	5	712	0	7.89	1.5	134.7	0	-4,-5	-	-	10.962	PRINCIPAL:1
ENSMUSG00000028960	Ube4b	ENSMUST00000138181	ENSMUSP00000122020	TRANSLATION	nonsense_mediated_decay	start	-	5	128	0	2.5	0	132	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028960	Ube4b	ENSMUST00000172836	ENSMUSP00000134452	TRANSLATION	nonsense_mediated_decay	-	-	5	998	0	5.41	0	519.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028960	Ube4b	ENSMUST00000131986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028960	Ube4b	ENSMUST00000174343	ENSMUSP00000134556	TRANSLATION	nonsense_mediated_decay	-	-	5	409	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028960	Ube4b	ENSMUST00000238439	ENSMUSP00000158654	TRANSLATION	protein_coding	-	-	-	1307	0	9.24	0	784.1	0	-4,-7	-	-	12	MINOR
ENSMUSG00000028960	Ube4b	ENSMUST00000239095	ENSMUSP00000158872	TRANSLATION	protein_coding	-	-	-	1353	0	9.24	0	784.1	0	-4,-7	-	-	12	MINOR
ENSMUSG00000028960	Ube4b	ENSMUST00000103212	ENSMUSP00000099501	TRANSLATION	protein_coding	-	CCDS18958.1	1	1173	0	9.24	8.8	784.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028960	Ube4b	ENSMUST00000153430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028960	Ube4b	ENSMUST00000084123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028960	Ube4b	ENSMUST00000173005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028960	Ube4b	ENSMUST00000155968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028960	Ube4b	ENSMUST00000136732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028960	Ube4b	ENSMUST00000172643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028960	Ube4b	ENSMUST00000138027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062585	Cnr2	ENSMUST00000097843	ENSMUSP00000095454	TRANSLATION	protein_coding	-	CCDS18793.1	1	347	0	0.6	0.5	122.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062585	Cnr2	ENSMUST00000068830	ENSMUSP00000069957	TRANSLATION	protein_coding	-	CCDS18793.1	1	347	0	0.6	0.5	122.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028261	Ndufaf4	ENSMUST00000146721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028261	Ndufaf4	ENSMUST00000151249	ENSMUSP00000117141	TRANSLATION	protein_coding	start	-	2	127	0	0	0	104.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028261	Ndufaf4	ENSMUST00000029925	ENSMUSP00000029925	TRANSLATION	protein_coding	-	CCDS18007.1	1	173	0	0	2.7	213.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028982	Slc25a33	ENSMUST00000105686	ENSMUSP00000101311	TRANSLATION	protein_coding	-	CCDS38976.1	1	320	0	2.79	8.8	212.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020220	Vps13d	ENSMUST00000144835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020220	Vps13d	ENSMUST00000185113	ENSMUSP00000138946	TRANSLATION	protein_coding	start	-	5	3211	0	0	0	378	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020220	Vps13d	ENSMUST00000155670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020220	Vps13d	ENSMUST00000141208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020220	Vps13d	ENSMUST00000132700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020220	Vps13d	ENSMUST00000036579	ENSMUSP00000043240	TRANSLATION	protein_coding	-	CCDS71517.1	5	4390	0	0	5.1	779.5	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000020220	Vps13d	ENSMUST00000130704	ENSMUSP00000118699	TRANSLATION	nonsense_mediated_decay	start	-	1	1078	0	0	0	351.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020220	Vps13d	ENSMUST00000147511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020220	Vps13d	ENSMUST00000020441	ENSMUSP00000020441	TRANSLATION	protein_coding	-	-	5	4359	0	0	0	779.5	0	-4,-7	-	-	6	MINOR
ENSMUSG00000020220	Vps13d	ENSMUST00000142308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073758	Sh3d21	ENSMUST00000094760	ENSMUSP00000092352	TRANSLATION	protein_coding	-	CCDS18644.1	1	549	0	2.79	0.5	57.1	0	-4,-7	-	-	1.188	MINOR
ENSMUSG00000073758	Sh3d21	ENSMUST00000141638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073758	Sh3d21	ENSMUST00000152402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073758	Sh3d21	ENSMUST00000097891	ENSMUSP00000095501	TRANSLATION	protein_coding	-	CCDS51301.1	1	665	0	5.548	0.5	145.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073758	Sh3d21	ENSMUST00000142891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036078	Sigmar1	ENSMUST00000146655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036078	Sigmar1	ENSMUST00000071561	ENSMUSP00000071492	TRANSLATION	protein_coding	-	CCDS71362.1	1	192	0	3	2.9	103.3	1	1,-4	-	-	4.878	MINOR
ENSMUSG00000036078	Sigmar1	ENSMUST00000059354	ENSMUSP00000056027	TRANSLATION	protein_coding	-	CCDS18070.1	1	223	0	4	7.5	219.9	1	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000036078	Sigmar1	ENSMUST00000148223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036078	Sigmar1	ENSMUST00000123524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036078	Sigmar1	ENSMUST00000142840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036078	Sigmar1	ENSMUST00000133590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036078	Sigmar1	ENSMUST00000149647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028701	Lurap1	ENSMUST00000135982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028701	Lurap1	ENSMUST00000030469	ENSMUSP00000030469	TRANSLATION	protein_coding	-	CCDS51275.1	1	239	0	0	7.5	171.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029075	Tnfrsf4	ENSMUST00000030952	ENSMUSP00000030952	TRANSLATION	protein_coding	-	CCDS19055.1	1	272	0	3.75	1.5	56.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029075	Tnfrsf4	ENSMUST00000143576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029075	Tnfrsf4	ENSMUST00000127377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028240	Cyp7a1	ENSMUST00000029905	ENSMUSP00000029905	TRANSLATION	protein_coding	-	CCDS17950.1	1	503	25	5.3	5.1	289.4	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028240	Cyp7a1	ENSMUST00000147346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029027	Dffb	ENSMUST00000154458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029027	Dffb	ENSMUST00000133607	ENSMUSP00000151699	TRANSLATION	nonsense_mediated_decay	-	-	5	160	0	3	0	109.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029027	Dffb	ENSMUST00000030893	ENSMUSP00000030893	TRANSLATION	protein_coding	-	CCDS19004.1	1	344	4	6.75	0.5	392	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000029027	Dffb	ENSMUST00000219093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029027	Dffb	ENSMUST00000142671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028542	Slc6a9	ENSMUST00000136476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028542	Slc6a9	ENSMUST00000163288	ENSMUSP00000127289	TRANSLATION	protein_coding	-	-	5	637	0	10.15	1.2	698.2	17	-4,-7	-	-	6.765	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000169885	ENSMUSP00000127093	TRANSLATION	protein_coding	-	-	5	521	0	8.5	2.4	601.4	12	-3,-5	-	-	2.343	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000149168	ENSMUSP00000129359	TRANSLATION	nonsense_mediated_decay	-	-	1	126	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000169990	ENSMUSP00000127203	TRANSLATION	protein_coding	stop	-	5	373	0	6.25	0	434.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000063857	ENSMUSP00000066102	TRANSLATION	protein_coding	-	CCDS18538.1	1	633	0	10.65	7.5	770.3	17	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028542	Slc6a9	ENSMUST00000135769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028542	Slc6a9	ENSMUST00000170733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028542	Slc6a9	ENSMUST00000030269	ENSMUSP00000030269	TRANSLATION	protein_coding	-	CCDS18538.1	1	633	0	10.65	7.5	770.3	17	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028542	Slc6a9	ENSMUST00000132043	ENSMUSP00000122676	TRANSLATION	protein_coding	stop	-	5	321	0	6.25	0	434.8	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000151316	ENSMUSP00000118372	TRANSLATION	protein_coding	stop	-	5	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028542	Slc6a9	ENSMUST00000123994	ENSMUSP00000127806	TRANSLATION	protein_coding	stop	-	5	116	0	2.15	0	152.2	4	1,-3	-	-	-1	MINOR
ENSMUSG00000096351	Samd11	ENSMUST00000179919	ENSMUSP00000136611	TRANSLATION	protein_coding	-	CCDS57323.1	1	552	0	1.6	0.5	41.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000096351	Samd11	ENSMUST00000219310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096351	Samd11	ENSMUST00000219393	ENSMUSP00000151817	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096351	Samd11	ENSMUST00000220030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096351	Samd11	ENSMUST00000218230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096351	Samd11	ENSMUST00000218788	ENSMUSP00000151442	TRANSLATION	protein_coding	-	-	1	542	0	1.6	1.5	41.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000096351	Samd11	ENSMUST00000220228	ENSMUSP00000151261	TRANSLATION	protein_coding	stop	-	3	245	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096351	Samd11	ENSMUST00000217934	ENSMUSP00000151756	TRANSLATION	protein_coding	-	-	1	542	0	1.6	1.5	41.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000096351	Samd11	ENSMUST00000219866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034185	6430628N08Rik	ENSMUST00000132221	ENSMUSP00000146242	TRANSLATION	protein_coding	-	-	1	177	7	0	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034185	6430628N08Rik	ENSMUST00000165938	ENSMUSP00000146010	TRANSLATION	protein_coding	-	-	5	176	0	0	0	0	0	-3,0	-	-	0	MINOR
ENSMUSG00000073775	Kti12	ENSMUST00000102738	ENSMUSP00000099799	TRANSLATION	protein_coding	-	CCDS18458.1	-	351	8	0	1.5	357.5	0	-3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028452	Vcp	ENSMUST00000139843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028452	Vcp	ENSMUST00000148182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028452	Vcp	ENSMUST00000154423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028452	Vcp	ENSMUST00000030164	ENSMUSP00000030164	TRANSLATION	protein_coding	-	CCDS18086.1	1	806	30	16.33	15.5	462.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028452	Vcp	ENSMUST00000154541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028691	Prdx1	ENSMUST00000151129	ENSMUSP00000119794	TRANSLATION	protein_coding	stop	-	3	169	0	4	0	137	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028691	Prdx1	ENSMUST00000135573	ENSMUSP00000114159	TRANSLATION	protein_coding	-	CCDS18515.1	1	199	0	4.75	21.5	190.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028691	Prdx1	ENSMUST00000106470	ENSMUSP00000102078	TRANSLATION	protein_coding	-	CCDS18515.1	5	199	0	4.75	21.5	190.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028691	Prdx1	ENSMUST00000156145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028691	Prdx1	ENSMUST00000129315	ENSMUSP00000117007	TRANSLATION	protein_coding	stop	-	3	123	0	3	0	117.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028691	Prdx1	ENSMUST00000030454	ENSMUSP00000030454	TRANSLATION	protein_coding	stop	-	2	176	0	4	0	160.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054000	Tusc1	ENSMUST00000066774	ENSMUSP00000069652	TRANSLATION	protein_coding	-	CCDS18357.1	-	205	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028280	Gabrr1	ENSMUST00000029947	ENSMUSP00000029947	TRANSLATION	protein_coding	-	CCDS18021.2	1	480	5	6.1	5.9	283.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000028411	Aptx	ENSMUST00000155710	ENSMUSP00000124769	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028411	Aptx	ENSMUST00000128810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028411	Aptx	ENSMUST00000030119	ENSMUSP00000030119	TRANSLATION	protein_coding	-	CCDS38712.1	1	335	16	5.88	0.5	168.4	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000028411	Aptx	ENSMUST00000108103	ENSMUSP00000103738	TRANSLATION	protein_coding	-	-	5	240	16	5.08	0	168.4	0	-4,-2	-	-	16.398	MINOR
ENSMUSG00000028411	Aptx	ENSMUST00000129021	ENSMUSP00000116966	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028411	Aptx	ENSMUST00000068125	ENSMUSP00000124264	TRANSLATION	protein_coding	-	CCDS38711.1	1	342	16	5.88	0.5	168.4	0	-4,-2	-	-	18	PRINCIPAL:4
ENSMUSG00000028749	Pla2g2f	ENSMUST00000030526	ENSMUSP00000030526	TRANSLATION	protein_coding	-	CCDS18832.1	1	210	3	2.7	2.7	118.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028457	Atp8b5	ENSMUST00000107942	ENSMUSP00000103575	TRANSLATION	protein_coding	-	CCDS18091.2	1	1183	6	3.42	0.5	421.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028457	Atp8b5	ENSMUST00000102953	ENSMUSP00000100018	TRANSLATION	protein_coding	-	-	1	305	1	1.05	0	117.5	0	-4,-5	-	-	2.262	MINOR
ENSMUSG00000028457	Atp8b5	ENSMUST00000107937	ENSMUSP00000103570	TRANSLATION	nonsense_mediated_decay	-	-	2	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028457	Atp8b5	ENSMUST00000136262	ENSMUSP00000116428	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028457	Atp8b5	ENSMUST00000056010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041936	Agrn	ENSMUST00000180572	ENSMUSP00000137931	TRANSLATION	protein_coding	-	CCDS19060.2	5	2034	7	21.05	0.5	1076	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000041936	Agrn	ENSMUST00000105575	ENSMUSP00000101200	TRANSLATION	protein_coding	-	-	5	1950	7	19.71	0.5	929.7	0	-4,-7	-	-	9.318	MINOR
ENSMUSG00000041936	Agrn	ENSMUST00000105574	ENSMUSP00000101199	TRANSLATION	protein_coding	-	-	5	1927	7	19.05	0.5	929.8	0	-4,-7	-	-	7.998	MINOR
ENSMUSG00000041936	Agrn	ENSMUST00000144749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041936	Agrn	ENSMUST00000181062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041936	Agrn	ENSMUST00000154494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041936	Agrn	ENSMUST00000071248	ENSMUSP00000071229	TRANSLATION	protein_coding	-	-	5	1151	3	7.5	0	483.5	0	-4,-7	-	-	2.574	MINOR
ENSMUSG00000028940	Hes2	ENSMUST00000138991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028940	Hes2	ENSMUST00000030782	ENSMUSP00000030782	TRANSLATION	protein_coding	-	CCDS18995.1	1	157	0	2.3	1.5	81.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028538	St3gal3	ENSMUST00000106410	ENSMUSP00000102018	TRANSLATION	protein_coding	-	CCDS18544.1	1	374	0	3.21	14.5	234.6	0	1,-3	-	-	16	PRINCIPAL:3
ENSMUSG00000028538	St3gal3	ENSMUST00000126336	ENSMUSP00000121051	TRANSLATION	protein_coding	stop	-	3	159	0	2.02	0	130.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028538	St3gal3	ENSMUST00000138274	ENSMUSP00000114444	TRANSLATION	protein_coding	start/stop	-	5	270	0	2.57	0	128.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028538	St3gal3	ENSMUST00000030263	ENSMUSP00000030263	TRANSLATION	protein_coding	-	CCDS18544.1	1	374	0	3.21	14.5	234.6	0	1,-3	-	-	16	PRINCIPAL:3
ENSMUSG00000028538	St3gal3	ENSMUST00000097912	ENSMUSP00000095525	TRANSLATION	protein_coding	-	CCDS71458.1	1	358	0	3.21	14.5	234.6	0	-1,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000042198	Chchd7	ENSMUST00000121110	ENSMUSP00000113276	TRANSLATION	protein_coding	-	CCDS38686.1	5	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000042198	Chchd7	ENSMUST00000137037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042198	Chchd7	ENSMUST00000123769	ENSMUSP00000117652	TRANSLATION	protein_coding	stop	-	5	57	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000150618	ENSMUSP00000118860	TRANSLATION	nonsense_mediated_decay	-	-	2	85	0	2.58	8.8	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000131746	ENSMUSP00000117905	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000108386	ENSMUSP00000104023	TRANSLATION	protein_coding	-	CCDS38686.1	1	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000042198	Chchd7	ENSMUST00000119403	ENSMUSP00000113613	TRANSLATION	protein_coding	-	CCDS38686.1	2	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000042198	Chchd7	ENSMUST00000128829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042198	Chchd7	ENSMUST00000041122	ENSMUSP00000041196	TRANSLATION	protein_coding	-	CCDS38686.1	1	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000042198	Chchd7	ENSMUST00000120732	ENSMUSP00000112389	TRANSLATION	protein_coding	-	-	1	52	0	1.5	0	0	0	-4,-5	-	-	3.486	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000151519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042198	Chchd7	ENSMUST00000119307	ENSMUSP00000113811	TRANSLATION	protein_coding	-	CCDS38686.1	2	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000042198	Chchd7	ENSMUST00000121210	ENSMUSP00000113884	TRANSLATION	protein_coding	-	-	2	59	0	1.698	0	0	0	-4,-5	-	-	3.948	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000149544	ENSMUSP00000118311	TRANSLATION	protein_coding	stop	-	2	79	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042198	Chchd7	ENSMUST00000121651	ENSMUSP00000112967	TRANSLATION	protein_coding	-	CCDS38686.1	1	85	0	2.58	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028545	Bend5	ENSMUST00000130523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028545	Bend5	ENSMUST00000138394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028545	Bend5	ENSMUST00000139876	ENSMUSP00000119368	TRANSLATION	protein_coding	start	-	2	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028545	Bend5	ENSMUST00000123667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028545	Bend5	ENSMUST00000030274	ENSMUSP00000030274	TRANSLATION	protein_coding	-	CCDS18472.1	1	421	0	0	6.3	53.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000028545	Bend5	ENSMUST00000129760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063851	Rnf183	ENSMUST00000079420	ENSMUSP00000078389	TRANSLATION	protein_coding	-	CCDS38775.1	-	190	8	0.2	6.4	40.5	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000063851	Rnf183	ENSMUST00000107455	ENSMUSP00000103079	TRANSLATION	protein_coding	-	CCDS38775.1	3	190	8	0.2	6.4	40.5	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000063851	Rnf183	ENSMUST00000107454	ENSMUSP00000103078	TRANSLATION	protein_coding	-	CCDS38775.1	3	190	8	0.2	6.4	40.5	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028405	Aco1	ENSMUST00000142360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028405	Aco1	ENSMUST00000152911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028405	Aco1	ENSMUST00000102973	ENSMUSP00000100038	TRANSLATION	protein_coding	-	CCDS18042.1	1	889	21	19.5	8.8	156.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028405	Aco1	ENSMUST00000135787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028356	Ambp	ENSMUST00000030041	ENSMUSP00000030041	TRANSLATION	protein_coding	-	CCDS18248.1	1	349	0	8.46	1.5	225.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028356	Ambp	ENSMUST00000142901	ENSMUSP00000118965	TRANSLATION	protein_coding	stop	-	3	47	0	1.13	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000078719	Msmp	ENSMUST00000107884	ENSMUSP00000103516	TRANSLATION	protein_coding	-	CCDS51167.1	3	139	0	1.2	7.5	33.4	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000041459	Tardbp	ENSMUST00000191378	ENSMUSP00000140718	TRANSLATION	nonsense_mediated_decay	start	-	5	138	0	4.16	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000105702	ENSMUSP00000101327	TRANSLATION	protein_coding	-	CCDS38967.1	5	302	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000189041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041459	Tardbp	ENSMUST00000045180	ENSMUSP00000038113	TRANSLATION	nonsense_mediated_decay	-	-	1	298	0	6.99	1.5	94	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000147391	ENSMUSP00000140333	TRANSLATION	nonsense_mediated_decay	start	-	2	35	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000186317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041459	Tardbp	ENSMUST00000105700	ENSMUSP00000101325	TRANSLATION	protein_coding	-	CCDS38967.1	1	302	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000186729	ENSMUSP00000139547	TRANSLATION	nonsense_mediated_decay	start	-	5	88	0	2.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000105699	ENSMUSP00000101324	TRANSLATION	protein_coding	-	CCDS38970.1	1	295	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000165113	ENSMUSP00000129342	TRANSLATION	protein_coding	-	CCDS38969.1	5	298	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000188134	ENSMUSP00000139476	TRANSLATION	nonsense_mediated_decay	-	-	5	298	0	6.99	1.5	94	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000095719	ENSMUSP00000093386	TRANSLATION	protein_coding	-	CCDS38968.1	1	304	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000190696	ENSMUSP00000139637	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000188380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041459	Tardbp	ENSMUST00000186711	ENSMUSP00000140057	TRANSLATION	protein_coding	start	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000187939	ENSMUSP00000140928	TRANSLATION	protein_coding	start	-	5	128	0	3.41	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000190552	ENSMUSP00000141052	TRANSLATION	nonsense_mediated_decay	start	-	5	175	0	4.99	0	73.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000188488	ENSMUSP00000140989	TRANSLATION	protein_coding	start	-	5	99	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000190630	ENSMUSP00000140385	TRANSLATION	protein_coding	start	-	2	85	0	2.33	0	25.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000187937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041459	Tardbp	ENSMUST00000190478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041459	Tardbp	ENSMUST00000140897	ENSMUSP00000135135	TRANSLATION	nonsense_mediated_decay	start	-	5	140	0	4.16	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000084125	ENSMUSP00000081142	TRANSLATION	protein_coding	-	CCDS38971.1	1	414	0	7.99	12.8	94	0	-4,-5	-	-	15.964	PRINCIPAL:1
ENSMUSG00000041459	Tardbp	ENSMUST00000185673	ENSMUSP00000141010	TRANSLATION	protein_coding	stop	-	5	149	0	2.83	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000190287	ENSMUSP00000140859	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	2.58	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000172073	ENSMUSP00000130963	TRANSLATION	protein_coding	-	CCDS38968.1	5	304	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000185824	ENSMUSP00000140110	TRANSLATION	protein_coding	start	-	5	200	0	5.99	0	94.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000191450	ENSMUSP00000140832	TRANSLATION	nonsense_mediated_decay	-	-	5	285	0	6.99	1	94	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000189048	ENSMUSP00000140364	TRANSLATION	protein_coding	-	CCDS38969.1	1	298	0	6.99	1.5	94	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000041459	Tardbp	ENSMUST00000186947	ENSMUSP00000140529	TRANSLATION	protein_coding	stop	-	5	243	0	5.24	0	55.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046623	Gjb4	ENSMUST00000060419	ENSMUSP00000053307	TRANSLATION	protein_coding	-	CCDS18669.1	1	266	0	1	6.3	266.4	4	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046623	Gjb4	ENSMUST00000106090	ENSMUSP00000101696	TRANSLATION	protein_coding	-	CCDS18669.1	5	266	0	1	6.3	266.4	4	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000041161	Otud3	ENSMUST00000097830	ENSMUSP00000095441	TRANSLATION	protein_coding	-	CCDS51337.1	2	396	0	4.2	5.3	38.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000066009	Zfp987	ENSMUST00000105730	ENSMUSP00000101355	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066009	Zfp987	ENSMUST00000091878	ENSMUSP00000089493	TRANSLATION	protein_coding	-	CCDS51372.1	1	633	56	1.73	0.5	387.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000066009	Zfp987	ENSMUST00000154939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000055822	ENSMUSP00000061113	TRANSLATION	protein_coding	-	-	1	361	0	0	0	350.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050812	Ecpas	ENSMUST00000142102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000107557	ENSMUSP00000103182	TRANSLATION	protein_coding	-	-	1	942	0	0	0	522.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000050812	Ecpas	ENSMUST00000135601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000131611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000151869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000134848	ENSMUSP00000114715	TRANSLATION	protein_coding	start/stop	-	5	246	0	0	0	243.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050812	Ecpas	ENSMUST00000149301	ENSMUSP00000117585	TRANSLATION	protein_coding	stop	-	5	1490	0	0	0	522.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050812	Ecpas	ENSMUST00000149513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050812	Ecpas	ENSMUST00000144512	ENSMUSP00000118103	TRANSLATION	protein_coding	stop	-	1	538	0	0	0	522.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050812	Ecpas	ENSMUST00000102889	ENSMUSP00000099953	TRANSLATION	protein_coding	-	CCDS18214.1	1	1840	0	0	5.4	522.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000005994	Tyrp1	ENSMUST00000133932	ENSMUSP00000119167	TRANSLATION	protein_coding	start/stop	-	1	176	4	1.02	0	38.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005994	Tyrp1	ENSMUST00000133655	ENSMUSP00000117080	TRANSLATION	protein_coding	stop	-	2	229	3	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000005994	Tyrp1	ENSMUST00000006151	ENSMUSP00000006151	TRANSLATION	protein_coding	-	CCDS18290.1	1	537	7	2.21	3.9	121	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000005994	Tyrp1	ENSMUST00000102831	ENSMUSP00000099895	TRANSLATION	protein_coding	-	CCDS18290.1	1	537	7	2.21	3.9	121	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028741	Mrto4	ENSMUST00000102503	ENSMUSP00000099561	TRANSLATION	protein_coding	-	CCDS71505.1	1	239	0	4.91	1.5	73.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028741	Mrto4	ENSMUST00000128239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028741	Mrto4	ENSMUST00000155257	ENSMUSP00000121453	TRANSLATION	protein_coding	stop	-	3	61	0	1.75	0	43.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028741	Mrto4	ENSMUST00000131052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028741	Mrto4	ENSMUST00000030513	ENSMUSP00000030513	TRANSLATION	protein_coding	-	CCDS18845.1	1	238	0	4.85	0.5	73.8	0	-4,-5	-	-	11.88	PRINCIPAL:3
ENSMUSG00000028741	Mrto4	ENSMUST00000139749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028741	Mrto4	ENSMUST00000123968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028702	Rad54l	ENSMUST00000139147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028702	Rad54l	ENSMUST00000138320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028702	Rad54l	ENSMUST00000102704	ENSMUSP00000099765	TRANSLATION	protein_coding	-	CCDS18504.1	1	747	11	13.05	7.5	249	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000028702	Rad54l	ENSMUST00000143089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028702	Rad54l	ENSMUST00000152741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028702	Rad54l	ENSMUST00000102705	ENSMUSP00000099766	TRANSLATION	protein_coding	-	CCDS18504.1	1	747	11	13.05	7.5	249	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000040044	Orc3	ENSMUST00000048706	ENSMUSP00000048319	TRANSLATION	protein_coding	-	CCDS18028.1	1	715	0	17.53	0.5	423.3	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000040044	Orc3	ENSMUST00000132918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000133107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000154858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000145619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000150116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000140334	ENSMUSP00000119335	TRANSLATION	protein_coding	stop	-	5	277	0	6.33	0	360	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040044	Orc3	ENSMUST00000141529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000108142	ENSMUSP00000103777	TRANSLATION	protein_coding	-	CCDS51137.1	1	714	0	17.53	0.5	423.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000040044	Orc3	ENSMUST00000156987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040044	Orc3	ENSMUST00000125218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028519	Dab1	ENSMUST00000141037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028519	Dab1	ENSMUST00000106827	ENSMUSP00000102440	TRANSLATION	protein_coding	-	-	1	204	6	4.25	0	38.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028519	Dab1	ENSMUST00000143644	ENSMUSP00000118650	TRANSLATION	protein_coding	stop	-	5	160	6	3.5	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028519	Dab1	ENSMUST00000149672	ENSMUSP00000118532	TRANSLATION	protein_coding	start/stop	-	3	214	6	4.25	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028519	Dab1	ENSMUST00000106830	ENSMUSP00000102443	TRANSLATION	protein_coding	-	CCDS18413.1	1	555	6	4.25	13.5	38.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028519	Dab1	ENSMUST00000106826	ENSMUSP00000102439	TRANSLATION	protein_coding	-	-	1	197	6	4.25	0	38.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028519	Dab1	ENSMUST00000146078	ENSMUSP00000125033	TRANSLATION	nonsense_mediated_decay	-	-	5	258	6	4.25	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028519	Dab1	ENSMUST00000143294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078554	Fam229a	ENSMUST00000135698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078554	Fam229a	ENSMUST00000106043	ENSMUSP00000101658	TRANSLATION	protein_coding	-	CCDS38885.1	1	128	0	0	3.9	51.5	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000029064	Gnb1	ENSMUST00000105616	ENSMUSP00000101241	TRANSLATION	protein_coding	-	CCDS19030.1	1	340	0	9	21.5	165.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029064	Gnb1	ENSMUST00000176637	ENSMUSP00000135091	TRANSLATION	protein_coding	-	CCDS19030.1	1	340	0	9	21.5	165.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029064	Gnb1	ENSMUST00000177094	ENSMUSP00000135492	TRANSLATION	protein_coding	stop	-	3	273	0	7	0	120.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029064	Gnb1	ENSMUST00000030940	ENSMUSP00000030940	TRANSLATION	protein_coding	-	CCDS19030.1	1	340	0	9	21.5	165.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029064	Gnb1	ENSMUST00000176308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029064	Gnb1	ENSMUST00000176411	ENSMUSP00000135769	TRANSLATION	protein_coding	stop	-	3	108	0	3.25	0	27.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029064	Gnb1	ENSMUST00000165335	ENSMUSP00000130123	TRANSLATION	protein_coding	-	CCDS19030.1	1	340	0	9	21.5	165.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029064	Gnb1	ENSMUST00000175705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029064	Gnb1	ENSMUST00000175688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059291	Rpl11	ENSMUST00000150565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000153223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000137580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000128733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000147059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000102536	ENSMUSP00000099595	TRANSLATION	protein_coding	-	CCDS18799.1	1	178	0	4.33	19	151.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000059291	Rpl11	ENSMUST00000142440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000133613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000125726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059291	Rpl11	ENSMUST00000155873	ENSMUSP00000121108	TRANSLATION	protein_coding	stop	-	3	172	0	4	0	151.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023153	Tmem52	ENSMUST00000178188	ENSMUSP00000136899	TRANSLATION	protein_coding	-	CCDS57320.1	2	182	0	0	0.5	198.2	1	0,-3	-	-	3.528	MINOR
ENSMUSG00000023153	Tmem52	ENSMUST00000178238	ENSMUSP00000136919	TRANSLATION	protein_coding	-	CCDS57318.1	1	202	0	0	0.5	231.4	2	0,-4	-	-	5.52	PRINCIPAL:4
ENSMUSG00000023153	Tmem52	ENSMUST00000023920	ENSMUSP00000023920	TRANSLATION	protein_coding	-	CCDS57319.1	1	196	0	0	1.5	239.4	2	0,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000023153	Tmem52	ENSMUST00000145796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023153	Tmem52	ENSMUST00000131599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006386	Tek	ENSMUST00000102798	ENSMUSP00000099862	TRANSLATION	protein_coding	-	CCDS18361.1	1	1123	17	19.8	7.5	583.8	1	2,-2	-	-	21	PRINCIPAL:3
ENSMUSG00000006386	Tek	ENSMUST00000073939	ENSMUSP00000073595	TRANSLATION	protein_coding	-	CCDS80122.1	1	1072	17	18.8	0.5	583.8	1	2,-2	-	-	16.002	MINOR
ENSMUSG00000006386	Tek	ENSMUST00000131958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006386	Tek	ENSMUST00000071168	ENSMUSP00000071162	TRANSLATION	protein_coding	-	CCDS71421.1	1	1122	17	19.8	7.5	583.8	1	2,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000078672	Mup20	ENSMUST00000074018	ENSMUSP00000073667	TRANSLATION	protein_coding	-	CCDS18233.1	1	181	0	5.08	0.5	117.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000233530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000094769	ENSMUSP00000154851	TRANSLATION	protein_coding	-	-	1	217	0	0	1.5	189.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000233207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000232733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000233434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000233875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044730	9930104L06Rik	ENSMUST00000233289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041058	Wwp1	ENSMUST00000108246	ENSMUSP00000103881	TRANSLATION	protein_coding	-	CCDS38697.1	1	918	6	17.6	2.7	554.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000041058	Wwp1	ENSMUST00000035982	ENSMUSP00000041627	TRANSLATION	protein_coding	-	CCDS38697.1	5	918	6	17.6	2.7	554.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037266	Rsrp1	ENSMUST00000149354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037266	Rsrp1	ENSMUST00000078084	ENSMUSP00000077226	TRANSLATION	protein_coding	-	CCDS51328.1	1	298	0	0	0.5	432.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037266	Rsrp1	ENSMUST00000151178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037266	Rsrp1	ENSMUST00000148900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037266	Rsrp1	ENSMUST00000154837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037266	Rsrp1	ENSMUST00000145364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037266	Rsrp1	ENSMUST00000149003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037266	Rsrp1	ENSMUST00000125679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038047	Haus6	ENSMUST00000128381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038047	Haus6	ENSMUST00000125481	ENSMUSP00000118609	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038047	Haus6	ENSMUST00000123432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038047	Haus6	ENSMUST00000070607	ENSMUSP00000070504	TRANSLATION	protein_coding	-	CCDS18307.1	1	933	0	0	0.5	252.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028885	Smpdl3b	ENSMUST00000030709	ENSMUSP00000030709	TRANSLATION	protein_coding	-	CCDS18733.1	1	456	8	7.36	1.5	68.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028521	Slc35d1	ENSMUST00000183432	ENSMUSP00000138926	TRANSLATION	nonsense_mediated_decay	start	-	5	211	0	0	0	35.8	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000028521	Slc35d1	ENSMUST00000094947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028521	Slc35d1	ENSMUST00000154845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028521	Slc35d1	ENSMUST00000036195	ENSMUSP00000037617	TRANSLATION	protein_coding	start	-	1	334	0	0	0	57	16	-4,-7	-	-	-1	MINOR
ENSMUSG00000028521	Slc35d1	ENSMUST00000150285	ENSMUSP00000122124	TRANSLATION	protein_coding	-	CCDS18409.1	1	306	0	0	0.5	41	14	-4,-2	-	-	4.314	PRINCIPAL:1
ENSMUSG00000028398	Dmac1	ENSMUST00000030103	ENSMUSP00000030103	TRANSLATION	protein_coding	-	CCDS18288.1	1	111	0	0	0.5	70.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000071015	Gm136	ENSMUST00000095129	ENSMUSP00000092748	TRANSLATION	protein_coding	-	CCDS18032.1	1	328	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000028747	Htr6	ENSMUST00000105802	ENSMUSP00000101428	TRANSLATION	protein_coding	-	CCDS18838.1	5	440	0	1.36	3.9	208.5	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000028747	Htr6	ENSMUST00000068036	ENSMUSP00000068333	TRANSLATION	protein_coding	-	CCDS18838.1	1	440	0	1.36	3.9	208.5	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000096154	Gm13057	ENSMUST00000105776	ENSMUSP00000101402	TRANSLATION	protein_coding	-	CCDS51353.1	5	496	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000094695	Gm21953	ENSMUST00000238203	ENSMUSP00000158629	TRANSLATION	protein_coding	-	CCDS57271.1	-	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000094695	Gm21953	ENSMUST00000108002	ENSMUSP00000103637	TRANSLATION	protein_coding	-	CCDS57271.1	5	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000028479	Gne	ENSMUST00000140724	ENSMUSP00000122793	TRANSLATION	protein_coding	stop	-	2	118	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000173383	ENSMUSP00000133440	TRANSLATION	protein_coding	stop	-	2	133	0	3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000173976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028479	Gne	ENSMUST00000173569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028479	Gne	ENSMUST00000144985	ENSMUSP00000118443	TRANSLATION	protein_coding	stop	-	3	213	0	4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000173274	ENSMUSP00000134406	TRANSLATION	protein_coding	stop	-	3	292	0	7.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000173234	ENSMUSP00000133521	TRANSLATION	protein_coding	-	-	5	648	20	14.58	2.4	0	0	-4,-7	-	-	3.69	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000174522	ENSMUSP00000134191	TRANSLATION	nonsense_mediated_decay	start	-	1	37	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000030201	ENSMUSP00000030201	TRANSLATION	protein_coding	-	CCDS18120.2	1	753	30	15.91	4	0	0	-4,-5	-	-	12.752	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000172514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028479	Gne	ENSMUST00000133709	ENSMUSP00000133551	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000128439	ENSMUSP00000115858	TRANSLATION	protein_coding	stop	-	3	121	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028479	Gne	ENSMUST00000102936	ENSMUSP00000100000	TRANSLATION	protein_coding	-	CCDS51170.1	1	722	30	15.91	17	0	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028479	Gne	ENSMUST00000172533	ENSMUSP00000134040	TRANSLATION	nonsense_mediated_decay	-	-	5	479	4	11.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000099518	Gm13275	ENSMUST00000178347	ENSMUSP00000137245	TRANSLATION	protein_coding	-	CCDS38807.1	-	182	0	0.48	0.5	94.5	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000028643	Svbp	ENSMUST00000030395	ENSMUSP00000030395	TRANSLATION	protein_coding	-	CCDS38858.1	1	66	0	0	15.5	126.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028643	Svbp	ENSMUST00000210595	ENSMUSP00000147292	TRANSLATION	protein_coding	-	-	5	48	0	0	0	58.1	0	-4,-5	-	-	1.884	MINOR
ENSMUSG00000028643	Svbp	ENSMUST00000106345	ENSMUSP00000101952	TRANSLATION	protein_coding	-	-	2	71	0	0	0	100.6	0	-4,-5	-	-	4.434	MINOR
ENSMUSG00000028643	Svbp	ENSMUST00000097908	ENSMUSP00000095518	TRANSLATION	protein_coding	-	CCDS18572.1	2	102	0	0	1.5	126.7	0	-4,-1	-	-	6.136	MINOR
ENSMUSG00000037366	Pafah2	ENSMUST00000105869	ENSMUSP00000101495	TRANSLATION	protein_coding	-	CCDS18771.1	1	390	7	7.76	6.3	512.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000037366	Pafah2	ENSMUST00000145626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037366	Pafah2	ENSMUST00000131337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037366	Pafah2	ENSMUST00000148863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037366	Pafah2	ENSMUST00000132658	ENSMUSP00000117607	TRANSLATION	protein_coding	stop	-	2	103	0	1.96	0	112.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037366	Pafah2	ENSMUST00000140888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037366	Pafah2	ENSMUST00000105870	ENSMUSP00000101496	TRANSLATION	protein_coding	-	CCDS71490.1	1	415	7	7.76	0.5	512.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028463	Car9	ENSMUST00000154251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028463	Car9	ENSMUST00000128232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028463	Car9	ENSMUST00000129996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028463	Car9	ENSMUST00000030183	ENSMUSP00000030183	TRANSLATION	protein_coding	-	CCDS18099.1	1	437	6	6.494	1.5	270	1	1,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028463	Car9	ENSMUST00000126750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028463	Car9	ENSMUST00000124114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028463	Car9	ENSMUST00000138073	ENSMUSP00000114493	TRANSLATION	protein_coding	start/stop	-	1	237	5	4.494	0	161.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000028654	Mycl	ENSMUST00000144998	ENSMUSP00000117232	TRANSLATION	protein_coding	stop	-	3	72	0	0.64	0	55.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028654	Mycl	ENSMUST00000106252	ENSMUSP00000101859	TRANSLATION	protein_coding	-	CCDS18606.1	1	368	0	1.04	5.1	180.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028654	Mycl	ENSMUST00000135925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028654	Mycl	ENSMUST00000147259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028654	Mycl	ENSMUST00000030407	ENSMUSP00000030407	TRANSLATION	protein_coding	-	CCDS18606.1	1	368	0	1.04	5.1	180.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028717	Tal1	ENSMUST00000162489	ENSMUSP00000124983	TRANSLATION	protein_coding	-	CCDS18486.1	1	329	0	1	3.9	57.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028717	Tal1	ENSMUST00000136946	ENSMUSP00000121437	TRANSLATION	protein_coding	stop	-	3	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028717	Tal1	ENSMUST00000030489	ENSMUSP00000030489	TRANSLATION	protein_coding	-	CCDS18486.1	1	329	0	1	3.9	57.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028717	Tal1	ENSMUST00000161601	ENSMUSP00000125202	TRANSLATION	protein_coding	-	CCDS18486.1	1	329	0	1	3.9	57.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028710	Atpaf1	ENSMUST00000137401	ENSMUSP00000135490	TRANSLATION	nonsense_mediated_decay	start	-	3	78	0	0.63	0	32.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028710	Atpaf1	ENSMUST00000184179	ENSMUSP00000138942	TRANSLATION	nonsense_mediated_decay	start	-	1	271	0	2.7	0	162.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028710	Atpaf1	ENSMUST00000239030	ENSMUSP00000158943	TRANSLATION	protein_coding	-	-	-	324	0	2.7	0	162.1	0	-3,-1	-	-	12	MINOR
ENSMUSG00000028710	Atpaf1	ENSMUST00000175725	ENSMUSP00000135073	TRANSLATION	protein_coding	-	-	5	207	0	2.24	0	153.9	0	-4,-5	-	-	10.488	MINOR
ENSMUSG00000028710	Atpaf1	ENSMUST00000176047	ENSMUSP00000135831	TRANSLATION	protein_coding	-	CCDS18496.2	1	348	0	2.7	5.1	162.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028710	Atpaf1	ENSMUST00000176192	ENSMUSP00000135741	TRANSLATION	protein_coding	start	-	5	97	0	0.98	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028710	Atpaf1	ENSMUST00000177280	ENSMUSP00000135214	TRANSLATION	protein_coding	stop	-	5	212	0	1.47	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073733	Cplane2	ENSMUST00000097813	ENSMUSP00000095422	TRANSLATION	protein_coding	-	CCDS38937.1	5	258	19	1.86	5.3	38.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000073733	Cplane2	ENSMUST00000125175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073733	Cplane2	ENSMUST00000151475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029016	Clcn6	ENSMUST00000105711	ENSMUSP00000101336	TRANSLATION	nonsense_mediated_decay	-	-	5	731	0	6.39	0	349.2	10	-4,-6	-	-	-1	MINOR
ENSMUSG00000029016	Clcn6	ENSMUST00000030879	ENSMUSP00000030879	TRANSLATION	protein_coding	-	CCDS18928.1	1	870	0	7.7132	8.8	386.7	10	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000029016	Clcn6	ENSMUST00000134377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029016	Clcn6	ENSMUST00000137724	ENSMUSP00000121751	TRANSLATION	protein_coding	-	-	5	873	0	7.7132	8.8	386.7	10	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000029016	Clcn6	ENSMUST00000131232	ENSMUSP00000116153	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000067916	Zfp991	ENSMUST00000084149	ENSMUSP00000081167	TRANSLATION	protein_coding	-	CCDS38961.1	1	573	48	1.864	0.5	315	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000067916	Zfp991	ENSMUST00000151022	ENSMUSP00000120221	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028863	Meaf6	ENSMUST00000155212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028863	Meaf6	ENSMUST00000055213	ENSMUSP00000053543	TRANSLATION	protein_coding	-	CCDS18637.1	1	192	0	0	2.7	0	0	-4,-6	-	-	0.512	MINOR
ENSMUSG00000028863	Meaf6	ENSMUST00000152816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028863	Meaf6	ENSMUST00000106171	ENSMUSP00000101777	TRANSLATION	protein_coding	start	-	2	173	0	0	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028863	Meaf6	ENSMUST00000184205	ENSMUSP00000138973	TRANSLATION	nonsense_mediated_decay	-	-	1	181	0	0	3.3	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028863	Meaf6	ENSMUST00000154689	ENSMUSP00000122288	TRANSLATION	protein_coding	-	CCDS71467.1	1	191	0	0	14.3	0	0	-4,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000028863	Meaf6	ENSMUST00000124154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028863	Meaf6	ENSMUST00000184118	ENSMUSP00000139156	TRANSLATION	nonsense_mediated_decay	start	-	3	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094793	Mup12	ENSMUST00000117932	ENSMUSP00000112787	TRANSLATION	protein_coding	-	CCDS51192.1	1	180	0	5.08	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000056174	Col8a2	ENSMUST00000128435	ENSMUSP00000123003	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000056174	Col8a2	ENSMUST00000070132	ENSMUSP00000070270	TRANSLATION	protein_coding	-	CCDS18649.1	1	699	3	0.48	2.7	161	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000040859	Bsdc1	ENSMUST00000133083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040859	Bsdc1	ENSMUST00000138013	ENSMUSP00000122257	TRANSLATION	protein_coding	stop	-	2	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040859	Bsdc1	ENSMUST00000131741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040859	Bsdc1	ENSMUST00000149587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040859	Bsdc1	ENSMUST00000153591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040859	Bsdc1	ENSMUST00000145168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040859	Bsdc1	ENSMUST00000154368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040859	Bsdc1	ENSMUST00000048162	ENSMUSP00000048742	TRANSLATION	protein_coding	-	CCDS18692.1	1	427	0	0	1.5	59.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028392	Bspry	ENSMUST00000107449	ENSMUSP00000103073	TRANSLATION	protein_coding	-	-	1	473	4	0.6	0	101.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000028392	Bspry	ENSMUST00000030088	ENSMUSP00000030088	TRANSLATION	protein_coding	-	CCDS18241.1	1	486	4	0.6	0.5	101.3	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000028392	Bspry	ENSMUST00000132237	ENSMUSP00000119504	TRANSLATION	nonsense_mediated_decay	-	-	5	123	4	0	0	26.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073910	Mob3b	ENSMUST00000102975	ENSMUSP00000100040	TRANSLATION	protein_coding	-	CCDS18036.1	1	216	4	2.066	21.5	265.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000073910	Mob3b	ENSMUST00000155725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028226	Mmp16	ENSMUST00000139418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028226	Mmp16	ENSMUST00000142434	ENSMUSP00000121087	TRANSLATION	protein_coding	stop	-	2	127	1	1.6	0	39.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000028226	Mmp16	ENSMUST00000029881	ENSMUSP00000029881	TRANSLATION	protein_coding	-	CCDS17989.1	1	607	23	9.13	14.8	544.5	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028226	Mmp16	ENSMUST00000149353	ENSMUSP00000116930	TRANSLATION	protein_coding	stop	-	3	174	6	3.03	0	100.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028226	Mmp16	ENSMUST00000183662	ENSMUSP00000139102	TRANSLATION	nonsense_mediated_decay	-	-	1	415	23	6.53	0	284.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000028226	Mmp16	ENSMUST00000133416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046093	Hpcal4	ENSMUST00000126995	ENSMUSP00000122104	TRANSLATION	protein_coding	stop	-	3	25	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046093	Hpcal4	ENSMUST00000152194	ENSMUSP00000120066	TRANSLATION	protein_coding	stop	-	1	155	13	3.1	0	52.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046093	Hpcal4	ENSMUST00000136619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046093	Hpcal4	ENSMUST00000059667	ENSMUSP00000051487	TRANSLATION	protein_coding	-	CCDS18611.1	1	191	20	4.1	19.5	110.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000046093	Hpcal4	ENSMUST00000106246	ENSMUSP00000101853	TRANSLATION	protein_coding	-	CCDS18611.1	5	191	20	4.1	19.5	110.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042367	Gjb3	ENSMUST00000046532	ENSMUSP00000046755	TRANSLATION	protein_coding	-	CCDS18668.1	1	270	0	0.8	1.5	265.8	4	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042367	Gjb3	ENSMUST00000106091	ENSMUSP00000101697	TRANSLATION	protein_coding	-	CCDS18668.1	1	270	0	0.8	1.5	265.8	4	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051279	Gdf6	ENSMUST00000057613	ENSMUSP00000062884	TRANSLATION	protein_coding	-	CCDS17960.1	1	454	0	0.8	1.5	188.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028673	Fuca1	ENSMUST00000030434	ENSMUSP00000030434	TRANSLATION	protein_coding	-	CCDS18794.1	1	452	0	4.52	0.5	491.6	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028673	Fuca1	ENSMUST00000142033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028673	Fuca1	ENSMUST00000142111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028673	Fuca1	ENSMUST00000153592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028673	Fuca1	ENSMUST00000146290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034785	Dio1	ENSMUST00000147709	ENSMUSP00000121450	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0	0	32.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034785	Dio1	ENSMUST00000106748	ENSMUSP00000102359	TRANSLATION	protein_coding	-	-	5	113	0	0.8	1.2	84.4	0	4,-1	-	-	0	MINOR
ENSMUSG00000034785	Dio1	ENSMUST00000134366	ENSMUSP00000119199	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0	0	32.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034785	Dio1	ENSMUST00000082426	ENSMUSP00000081007	TRANSLATION	protein_coding	-	CCDS18436.1	1	257	0	4.81	1.5	343.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034785	Dio1	ENSMUST00000145332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034785	Dio1	ENSMUST00000150974	ENSMUSP00000117751	TRANSLATION	nonsense_mediated_decay	-	-	5	125	0	1.46	0	115.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034785	Dio1	ENSMUST00000126291	ENSMUSP00000114807	TRANSLATION	protein_coding	stop	-	5	61	0	1.5	0	97.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034785	Dio1	ENSMUST00000129138	ENSMUSP00000118335	TRANSLATION	protein_coding	stop	-	5	208	0	3.15	0	217.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000028809	Srrm1	ENSMUST00000134854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028809	Srrm1	ENSMUST00000151251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028809	Srrm1	ENSMUST00000136342	ENSMUSP00000125003	TRANSLATION	protein_coding	-	CCDS38919.2	5	923	0	2.8	0.5	107	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028809	Srrm1	ENSMUST00000162914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028809	Srrm1	ENSMUST00000140050	ENSMUSP00000120952	TRANSLATION	protein_coding	start/stop	-	5	318	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028809	Srrm1	ENSMUST00000030613	ENSMUSP00000030613	TRANSLATION	protein_coding	-	-	1	897	0	2.8	0	107	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028809	Srrm1	ENSMUST00000131301	ENSMUSP00000125477	TRANSLATION	nonsense_mediated_decay	start	-	5	239	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028809	Srrm1	ENSMUST00000136409	ENSMUSP00000124450	TRANSLATION	nonsense_mediated_decay	start	-	3	140	0	1.8	0	50.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028809	Srrm1	ENSMUST00000131373	ENSMUSP00000122754	TRANSLATION	protein_coding	stop	-	3	198	0	2.8	0	107	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028809	Srrm1	ENSMUST00000136570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028809	Srrm1	ENSMUST00000084846	ENSMUSP00000081906	TRANSLATION	protein_coding	-	CCDS51329.1	1	918	0	2.8	0.5	107	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028809	Srrm1	ENSMUST00000150619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028809	Srrm1	ENSMUST00000134019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028809	Srrm1	ENSMUST00000105861	ENSMUSP00000101487	TRANSLATION	protein_coding	-	-	5	909	0	2.8	0.5	107	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028809	Srrm1	ENSMUST00000154788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006586	Runx1t1	ENSMUST00000150583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006586	Runx1t1	ENSMUST00000139736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006586	Runx1t1	ENSMUST00000098257	ENSMUSP00000095857	TRANSLATION	protein_coding	-	CCDS51125.1	1	604	8	7.1	10.4	280.6	0	-4,-7	-	-	21.24	ALTERNATIVE:1
ENSMUSG00000006586	Runx1t1	ENSMUST00000105566	ENSMUSP00000127109	TRANSLATION	protein_coding	-	CCDS51125.1	5	604	8	7.1	10.4	280.6	0	-4,-7	-	-	21.24	ALTERNATIVE:1
ENSMUSG00000006586	Runx1t1	ENSMUST00000006761	ENSMUSP00000006761	TRANSLATION	protein_coding	-	CCDS51124.1	1	584	8	7.1	12.6	280.6	0	-4,-6	-	-	22	ALTERNATIVE:1
ENSMUSG00000006586	Runx1t1	ENSMUST00000098256	ENSMUSP00000095856	TRANSLATION	protein_coding	-	CCDS17978.1	1	577	8	7.1	12.6	280.6	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000028689	Ccdc163	ENSMUST00000106462	ENSMUSP00000102070	TRANSLATION	protein_coding	-	-	1	209	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000028689	Ccdc163	ENSMUST00000129624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028689	Ccdc163	ENSMUST00000138305	ENSMUSP00000118352	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000156206	ENSMUSP00000123645	TRANSLATION	protein_coding	start	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000134192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028689	Ccdc163	ENSMUST00000155391	ENSMUSP00000120050	TRANSLATION	nonsense_mediated_decay	-	-	2	193	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000135499	ENSMUSP00000114263	TRANSLATION	protein_coding	stop	-	3	73	3	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000130828	ENSMUSP00000120572	TRANSLATION	protein_coding	stop	-	5	184	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000125671	ENSMUSP00000120954	TRANSLATION	protein_coding	stop	-	5	124	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028689	Ccdc163	ENSMUST00000124628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028689	Ccdc163	ENSMUST00000106464	ENSMUSP00000102072	TRANSLATION	protein_coding	-	CCDS38853.1	5	326	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000028689	Ccdc163	ENSMUST00000106463	ENSMUSP00000102071	TRANSLATION	protein_coding	-	CCDS38853.1	5	326	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000028689	Ccdc163	ENSMUST00000126197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028689	Ccdc163	ENSMUST00000030452	ENSMUSP00000030452	TRANSLATION	protein_coding	-	-	5	248	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000028412	Slc44a1	ENSMUST00000133582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028412	Slc44a1	ENSMUST00000107645	ENSMUSP00000103272	TRANSLATION	protein_coding	-	-	5	446	0	0	0	351.8	11	-1,-5	-	-	6	MINOR
ENSMUSG00000028412	Slc44a1	ENSMUST00000102911	ENSMUSP00000099975	TRANSLATION	protein_coding	-	CCDS18189.1	1	653	0	0	6.3	351.8	13	-4,-7	-	-	8.337	PRINCIPAL:2
ENSMUSG00000028412	Slc44a1	ENSMUST00000136607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028412	Slc44a1	ENSMUST00000107651	ENSMUSP00000103278	TRANSLATION	protein_coding	-	-	5	656	0	0	7.6	351.8	13	-4,-7	-	-	8.913	ALTERNATIVE:1
ENSMUSG00000028412	Slc44a1	ENSMUST00000107646	ENSMUSP00000103273	TRANSLATION	protein_coding	-	CCDS51178.1	5	526	0	0	0.5	221.3	10	-4,-7	-	-	0	MINOR
ENSMUSG00000028412	Slc44a1	ENSMUST00000107647	ENSMUSP00000103274	TRANSLATION	protein_coding	-	-	2	718	0	0	7.8	351.8	13	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000078350	Smim1	ENSMUST00000132541	ENSMUSP00000138471	TRANSLATION	protein_coding	-	CCDS59664.1	3	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000139569	ENSMUSP00000138127	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078350	Smim1	ENSMUST00000125533	ENSMUSP00000138324	TRANSLATION	protein_coding	-	CCDS59664.1	1	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000126624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078350	Smim1	ENSMUST00000182191	ENSMUSP00000138710	TRANSLATION	protein_coding	-	-	1	67	0	0	0	44.2	0	-4,-5	-	-	0.054	MINOR
ENSMUSG00000078350	Smim1	ENSMUST00000146426	ENSMUSP00000138306	TRANSLATION	protein_coding	stop	-	1	33	0	0	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078350	Smim1	ENSMUST00000126119	ENSMUSP00000138560	TRANSLATION	protein_coding	-	CCDS59664.1	2	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000146054	ENSMUSP00000138605	TRANSLATION	protein_coding	-	CCDS59664.1	1	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000145527	ENSMUSP00000138448	TRANSLATION	protein_coding	-	CCDS59664.1	2	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000146543	ENSMUSP00000138267	TRANSLATION	protein_coding	-	-	1	67	0	0	0	44.2	0	-4,-5	-	-	0.054	MINOR
ENSMUSG00000078350	Smim1	ENSMUST00000143047	ENSMUSP00000138733	TRANSLATION	protein_coding	-	CCDS59664.1	1	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000182151	ENSMUSP00000138692	TRANSLATION	protein_coding	-	CCDS59664.1	2	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000078350	Smim1	ENSMUST00000131325	ENSMUSP00000138777	TRANSLATION	protein_coding	-	-	5	67	0	0	0	44.2	0	-4,-5	-	-	0.054	MINOR
ENSMUSG00000078350	Smim1	ENSMUST00000130175	ENSMUSP00000138675	TRANSLATION	protein_coding	-	CCDS59664.1	5	78	0	0	6.4	143.3	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000028238	Atp6v0d2	ENSMUST00000029900	ENSMUSP00000029900	TRANSLATION	protein_coding	-	CCDS17994.1	1	350	0	6.59	8.8	366.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028238	Atp6v0d2	ENSMUST00000128605	ENSMUSP00000123599	TRANSLATION	protein_coding	stop	-	5	36	0	0.93	0	28.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070820	Olfr1339	ENSMUST00000217522	ENSMUSP00000148988	TRANSLATION	protein_coding	-	CCDS18559.1	3	315	0	0.42	1.5	179.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070820	Olfr1339	ENSMUST00000094832	ENSMUSP00000092428	TRANSLATION	protein_coding	-	CCDS18559.1	-	315	0	0.42	1.5	179.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028295	Smim8	ENSMUST00000108134	ENSMUSP00000103769	TRANSLATION	protein_coding	-	CCDS38706.1	2	97	0	0	10.8	126.8	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028295	Smim8	ENSMUST00000147396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028295	Smim8	ENSMUST00000108131	ENSMUSP00000103766	TRANSLATION	protein_coding	-	CCDS38706.1	3	97	0	0	10.8	126.8	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028295	Smim8	ENSMUST00000139922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028295	Smim8	ENSMUST00000108133	ENSMUSP00000103768	TRANSLATION	protein_coding	-	CCDS38706.1	1	97	0	0	10.8	126.8	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028295	Smim8	ENSMUST00000131295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028295	Smim8	ENSMUST00000108132	ENSMUSP00000103767	TRANSLATION	protein_coding	-	CCDS38706.1	3	97	0	0	10.8	126.8	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028295	Smim8	ENSMUST00000029972	ENSMUSP00000029972	TRANSLATION	protein_coding	-	CCDS38706.1	1	97	0	0	10.8	126.8	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062157	Ifnlr1	ENSMUST00000074408	ENSMUSP00000074009	TRANSLATION	protein_coding	-	CCDS18788.1	1	535	0	4.6	0.5	77.5	0	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028972	Car6	ENSMUST00000126449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028972	Car6	ENSMUST00000134648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028972	Car6	ENSMUST00000030817	ENSMUSP00000030817	TRANSLATION	protein_coding	-	CCDS51386.1	1	317	6	7.11	0.5	284.2	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028972	Car6	ENSMUST00000105683	ENSMUSP00000101308	TRANSLATION	protein_coding	-	-	1	261	6	5.75	0	231.6	0	-4,-5	-	-	12.126	MINOR
ENSMUSG00000008305	Tle1	ENSMUST00000102848	ENSMUSP00000099912	TRANSLATION	protein_coding	-	-	1	777	0	10.965	0.5	275.7	0	-4,-2	-	-	11.292	MINOR
ENSMUSG00000008305	Tle1	ENSMUST00000107337	ENSMUSP00000102960	TRANSLATION	protein_coding	-	CCDS71407.1	1	200	0	5.08	1.7	253.1	0	-4,-2	-	-	4.51	MINOR
ENSMUSG00000008305	Tle1	ENSMUST00000123259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008305	Tle1	ENSMUST00000072695	ENSMUSP00000072481	TRANSLATION	protein_coding	-	CCDS18274.1	1	770	0	11.13	12.4	282	0	-4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000008305	Tle1	ENSMUST00000132550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008305	Tle1	ENSMUST00000140154	ENSMUSP00000118513	TRANSLATION	protein_coding	start/stop	-	3	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008305	Tle1	ENSMUST00000134225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008305	Tle1	ENSMUST00000030095	ENSMUSP00000030095	TRANSLATION	protein_coding	-	-	5	780	0	10.965	10.4	275.5	0	-4,-2	-	-	14.58	MINOR
ENSMUSG00000008305	Tle1	ENSMUST00000074216	ENSMUSP00000073839	TRANSLATION	protein_coding	-	-	5	770	0	11.13	12.4	282	0	-4,-2	-	-	16	ALTERNATIVE:1
ENSMUSG00000008305	Tle1	ENSMUST00000137075	ENSMUSP00000118683	TRANSLATION	protein_coding	stop	-	3	194	0	4.75	0	249.5	0	0,-4	-	-	-1	MINOR
ENSMUSG00000041544	Disp3	ENSMUST00000047720	ENSMUSP00000038490	TRANSLATION	protein_coding	-	CCDS38966.1	5	1347	0	1.86	0.5	80.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041544	Disp3	ENSMUST00000143851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041544	Disp3	ENSMUST00000129734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028563	Tm2d1	ENSMUST00000125034	ENSMUSP00000124188	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028563	Tm2d1	ENSMUST00000102793	ENSMUSP00000099855	TRANSLATION	protein_coding	-	CCDS18374.1	1	208	0	0	3.9	61.4	4	-1,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000028563	Tm2d1	ENSMUST00000143116	ENSMUSP00000121468	TRANSLATION	protein_coding	start	-	5	140	0	0	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000028563	Tm2d1	ENSMUST00000107051	ENSMUSP00000102666	TRANSLATION	protein_coding	start	-	3	160	0	0	0	61.4	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000028563	Tm2d1	ENSMUST00000030292	ENSMUSP00000030292	TRANSLATION	protein_coding	-	-	1	203	0	0	0	61.4	4	-1,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028309	Rnf20	ENSMUST00000131962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028309	Rnf20	ENSMUST00000126675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028309	Rnf20	ENSMUST00000149862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028309	Rnf20	ENSMUST00000138490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028309	Rnf20	ENSMUST00000140341	ENSMUSP00000121334	TRANSLATION	protein_coding	stop	-	2	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028309	Rnf20	ENSMUST00000132782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028309	Rnf20	ENSMUST00000029989	ENSMUSP00000029989	TRANSLATION	protein_coding	-	CCDS18178.1	1	973	8	1.8	7.5	27.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028309	Rnf20	ENSMUST00000167496	ENSMUSP00000128546	TRANSLATION	protein_coding	-	CCDS18178.1	1	973	8	1.8	7.5	27.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028309	Rnf20	ENSMUST00000146547	ENSMUSP00000120668	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028309	Rnf20	ENSMUST00000156314	ENSMUSP00000118293	TRANSLATION	protein_coding	stop	-	1	606	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058908	Pla2g2a	ENSMUST00000147728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058908	Pla2g2a	ENSMUST00000134898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058908	Pla2g2a	ENSMUST00000077582	ENSMUSP00000138200	TRANSLATION	protein_coding	-	-	5	145	5	3.33	4.6	120	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000058908	Pla2g2a	ENSMUST00000135748	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000028264	Spaca1	ENSMUST00000084734	ENSMUSP00000081785	TRANSLATION	protein_coding	-	CCDS71357.1	1	290	0	0	0.5	0	1	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000028264	Spaca1	ENSMUST00000029927	ENSMUSP00000029927	TRANSLATION	protein_coding	-	CCDS18026.1	1	305	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000028264	Spaca1	ENSMUST00000108148	ENSMUSP00000103783	TRANSLATION	protein_coding	-	-	1	172	0	0	0	0	1	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000014592	Camta1	ENSMUST00000105668	ENSMUSP00000101293	TRANSLATION	protein_coding	-	-	1	591	0	2.95	2.4	22.6	0	-4,-5	-	-	2.526	MINOR
ENSMUSG00000014592	Camta1	ENSMUST00000049790	ENSMUSP00000054804	TRANSLATION	protein_coding	-	CCDS38981.1	5	1682	0	4.95	2.9	205.2	0	-4,-7	-	-	12.716	PRINCIPAL:2
ENSMUSG00000014592	Camta1	ENSMUST00000143434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014592	Camta1	ENSMUST00000169423	ENSMUSP00000127916	TRANSLATION	protein_coding	-	CCDS38981.1	5	1682	0	4.95	2.9	205.2	0	-4,-7	-	-	12.716	PRINCIPAL:2
ENSMUSG00000014592	Camta1	ENSMUST00000153938	ENSMUSP00000134684	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	6.3	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014592	Camta1	ENSMUST00000155685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014592	Camta1	ENSMUST00000135780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014592	Camta1	ENSMUST00000097774	ENSMUSP00000095381	TRANSLATION	protein_coding	-	-	5	1675	0	4.95	2.4	205.2	0	-4,-7	-	-	12.528	ALTERNATIVE:2
ENSMUSG00000014592	Camta1	ENSMUST00000131948	ENSMUSP00000118969	TRANSLATION	protein_coding	stop	-	2	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014592	Camta1	ENSMUST00000140030	ENSMUSP00000119067	TRANSLATION	protein_coding	start	-	5	238	0	1.582	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014592	Camta1	ENSMUST00000185034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014592	Camta1	ENSMUST00000105670	ENSMUSP00000101295	TRANSLATION	protein_coding	-	-	1	584	0	3.082	2.4	22.6	0	-4,-5	-	-	2.79	MINOR
ENSMUSG00000078515	Ddi2	ENSMUST00000177592	ENSMUSP00000136018	TRANSLATION	protein_coding	-	CCDS18879.1	1	582	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078515	Ddi2	ENSMUST00000102484	ENSMUSP00000099542	TRANSLATION	protein_coding	-	CCDS18880.1	1	399	1	8	8.3	235	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096591	Gm13272	ENSMUST00000179425	ENSMUSP00000135918	TRANSLATION	protein_coding	-	CCDS51224.1	-	182	0	0.48	0.5	94.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000087385	Frg2f1	ENSMUST00000149305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087385	Frg2f1	ENSMUST00000079611	ENSMUSP00000078560	TRANSLATION	protein_coding	-	CCDS51291.1	1	227	0	0	0.5	111.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000087385	Frg2f1	ENSMUST00000177165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087385	Frg2f1	ENSMUST00000137671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037622	Wdtc1	ENSMUST00000135929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037622	Wdtc1	ENSMUST00000145426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037622	Wdtc1	ENSMUST00000140976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037622	Wdtc1	ENSMUST00000043305	ENSMUSP00000040647	TRANSLATION	protein_coding	-	CCDS18746.1	1	677	0	7.57	7.5	67.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037622	Wdtc1	ENSMUST00000105906	ENSMUSP00000101526	TRANSLATION	protein_coding	-	-	5	615	0	6.02	2.4	28.5	0	-4,-2	-	-	6.081	MINOR
ENSMUSG00000037242	Clic4	ENSMUST00000037099	ENSMUSP00000041453	TRANSLATION	protein_coding	-	CCDS18783.1	1	253	17	5.75	16.2	33.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037242	Clic4	ENSMUST00000143370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044254	Pcsk9	ENSMUST00000049507	ENSMUSP00000055757	TRANSLATION	protein_coding	-	CCDS18418.1	1	694	3	12	0.5	79.4	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000028803	Nipal3	ENSMUST00000102549	ENSMUSP00000099608	TRANSLATION	protein_coding	-	CCDS18786.1	1	410	0	0	2.7	240.7	18	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000028803	Nipal3	ENSMUST00000183397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028803	Nipal3	ENSMUST00000140982	ENSMUSP00000118178	TRANSLATION	protein_coding	start	-	3	209	0	0	0	151.6	14	-3,-5	-	-	-1	MINOR
ENSMUSG00000028803	Nipal3	ENSMUST00000183807	ENSMUSP00000139088	TRANSLATION	nonsense_mediated_decay	-	-	1	418	0	0	0.5	240.7	18	-4,-7	-	-	-1	MINOR
ENSMUSG00000028803	Nipal3	ENSMUST00000105856	ENSMUSP00000101482	TRANSLATION	protein_coding	-	CCDS84805.1	1	418	0	0	0.5	240.7	18	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000028803	Nipal3	ENSMUST00000148023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028803	Nipal3	ENSMUST00000145020	ENSMUSP00000118122	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	60.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000028803	Nipal3	ENSMUST00000146617	ENSMUSP00000121776	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038578	Susd1	ENSMUST00000136942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038578	Susd1	ENSMUST00000136077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038578	Susd1	ENSMUST00000107544	ENSMUSP00000103168	TRANSLATION	protein_coding	-	-	5	699	11	3.96	0	127.7	1	-4,-5	-	-	14.604	MINOR
ENSMUSG00000038578	Susd1	ENSMUST00000040166	ENSMUSP00000048201	TRANSLATION	protein_coding	-	CCDS51184.1	1	752	13	4.94	0.5	129.4	1	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000038578	Susd1	ENSMUST00000136562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032870	Smap2	ENSMUST00000043200	ENSMUSP00000035800	TRANSLATION	protein_coding	-	CCDS18598.1	1	428	4	3.5	2.8	141	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032870	Smap2	ENSMUST00000151615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049657	Zbtb5	ENSMUST00000131991	ENSMUSP00000122991	TRANSLATION	protein_coding	stop	-	2	189	0	0.6	0	103.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049657	Zbtb5	ENSMUST00000180217	ENSMUSP00000136507	TRANSLATION	protein_coding	-	CCDS18129.1	2	670	7	0.6	1.5	103.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049657	Zbtb5	ENSMUST00000055028	ENSMUSP00000059919	TRANSLATION	protein_coding	-	CCDS18129.1	1	670	7	0.6	1.5	103.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049657	Zbtb5	ENSMUST00000107817	ENSMUSP00000103447	TRANSLATION	protein_coding	-	CCDS18129.1	1	670	7	0.6	1.5	103.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028300	C9orf72	ENSMUST00000142628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028300	C9orf72	ENSMUST00000108126	ENSMUSP00000103761	TRANSLATION	protein_coding	-	-	1	317	0	0	0	194.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028300	C9orf72	ENSMUST00000149138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028300	C9orf72	ENSMUST00000130538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028300	C9orf72	ENSMUST00000108127	ENSMUSP00000103762	TRANSLATION	protein_coding	-	CCDS38708.1	1	481	0	0	14.8	320.8	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000028300	C9orf72	ENSMUST00000156472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028300	C9orf72	ENSMUST00000084724	ENSMUSP00000081775	TRANSLATION	protein_coding	-	-	1	420	0	0	0	320.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000045071	E130308A19Rik	ENSMUST00000221633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045071	E130308A19Rik	ENSMUST00000152797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045071	E130308A19Rik	ENSMUST00000070150	ENSMUSP00000065702	TRANSLATION	protein_coding	-	CCDS18223.1	1	716	0	0	7.5	125.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045071	E130308A19Rik	ENSMUST00000052420	ENSMUSP00000062493	TRANSLATION	protein_coding	-	CCDS18224.1	1	737	0	0	5.1	67.8	0	-4,-5	-	-	4.443	MINOR
ENSMUSG00000070904	Ifna4	ENSMUST00000094973	ENSMUSP00000092581	TRANSLATION	protein_coding	-	CCDS18346.1	-	186	3	1	0.5	190.4	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000033295	Ptprf	ENSMUST00000124758	ENSMUSP00000119954	TRANSLATION	protein_coding	start	-	5	1332	22	20.0498	0	765.5	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000033295	Ptprf	ENSMUST00000049074	ENSMUSP00000039368	TRANSLATION	protein_coding	-	CCDS18546.1	5	1898	22	28.48	5.1	1073.5	3	2,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000033295	Ptprf	ENSMUST00000127616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033295	Ptprf	ENSMUST00000123484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033295	Ptprf	ENSMUST00000143348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033295	Ptprf	ENSMUST00000150096	ENSMUSP00000117313	TRANSLATION	protein_coding	start	-	5	1291	22	21.3264	0	746.3	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000033295	Ptprf	ENSMUST00000222620	ENSMUSP00000152568	TRANSLATION	protein_coding	stop	-	5	363	0	6.78	0	155.4	0	2,-1	-	-	-1	MINOR
ENSMUSG00000025413	Ttc4	ENSMUST00000026480	ENSMUSP00000026480	TRANSLATION	protein_coding	-	CCDS18424.1	1	386	0	2.68	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000025413	Ttc4	ENSMUST00000132572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000142342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000106772	ENSMUSP00000102384	TRANSLATION	protein_coding	-	-	5	286	0	2.68	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000025413	Ttc4	ENSMUST00000127571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000139687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000127133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000132650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025413	Ttc4	ENSMUST00000135676	ENSMUSP00000116620	TRANSLATION	protein_coding	stop	-	5	241	0	2.43	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039410	Prdm16	ENSMUST00000105638	ENSMUSP00000101263	TRANSLATION	protein_coding	-	-	5	1276	38	7.33	2.9	219	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039410	Prdm16	ENSMUST00000135064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039410	Prdm16	ENSMUST00000124771	ENSMUSP00000117598	TRANSLATION	protein_coding	stop	-	5	214	0	3.15	0	22.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039410	Prdm16	ENSMUST00000105637	ENSMUSP00000101262	TRANSLATION	protein_coding	-	CCDS71530.1	1	1274	38	7.23	2.9	219	0	-4,-6	-	-	17.802	ALTERNATIVE:2
ENSMUSG00000039410	Prdm16	ENSMUST00000097759	ENSMUSP00000095365	TRANSLATION	protein_coding	-	-	5	1257	38	7.33	1.2	219	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039410	Prdm16	ENSMUST00000105636	ENSMUSP00000101261	TRANSLATION	protein_coding	-	CCDS51400.1	1	1177	38	7.33	2.9	219	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039410	Prdm16	ENSMUST00000149605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039410	Prdm16	ENSMUST00000030902	ENSMUSP00000030902	TRANSLATION	protein_coding	-	CCDS38989.1	1	1275	38	7.23	2.9	219	0	-4,-6	-	-	17.802	PRINCIPAL:3
ENSMUSG00000039410	Prdm16	ENSMUST00000070313	ENSMUSP00000064546	TRANSLATION	protein_coding	-	CCDS71532.1	1	1178	38	7.33	2.9	219	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039410	Prdm16	ENSMUST00000156069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039410	Prdm16	ENSMUST00000141164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039410	Prdm16	ENSMUST00000131762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039410	Prdm16	ENSMUST00000145217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000133524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000128457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000147826	ENSMUSP00000116796	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000139967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000141493	ENSMUSP00000121891	TRANSLATION	protein_coding	stop	-	3	166	0	0	0	194.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000105645	ENSMUSP00000101270	TRANSLATION	protein_coding	-	CCDS51395.1	3	192	0	0	0.5	258.5	0	-4,-6	-	-	2.358	MINOR
ENSMUSG00000047613	A430005L14Rik	ENSMUST00000058393	ENSMUSP00000054638	TRANSLATION	protein_coding	-	CCDS19003.1	1	230	0	0	0.5	319.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000034210	Efcab14	ENSMUST00000106522	ENSMUSP00000102132	TRANSLATION	protein_coding	-	-	1	467	0	0	0	0	1	-4,-6	-	-	0	MINOR
ENSMUSG00000034210	Efcab14	ENSMUST00000106524	ENSMUSP00000102134	TRANSLATION	protein_coding	-	-	5	451	5	0	0	0	1	-4,-5	-	-	5	ALTERNATIVE:2
ENSMUSG00000034210	Efcab14	ENSMUST00000136593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034210	Efcab14	ENSMUST00000106525	ENSMUSP00000102135	TRANSLATION	protein_coding	-	-	1	484	5	0	1.5	0	1	-4,-6	-	-	5	ALTERNATIVE:2
ENSMUSG00000034210	Efcab14	ENSMUST00000141927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034210	Efcab14	ENSMUST00000074425	ENSMUSP00000074025	TRANSLATION	protein_coding	-	CCDS18494.1	1	529	5	0	0.5	0	1	-4,-6	-	-	5	PRINCIPAL:2
ENSMUSG00000034210	Efcab14	ENSMUST00000132306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028284	Map3k7	ENSMUST00000108183	ENSMUSP00000103818	TRANSLATION	protein_coding	-	-	5	491	18	7.3	2.4	205.8	0	-4,-6	-	-	18.645	MINOR
ENSMUSG00000028284	Map3k7	ENSMUST00000108184	ENSMUSP00000103819	TRANSLATION	protein_coding	-	-	5	518	18	7.3	2.4	205.8	0	-4,-6	-	-	18.645	MINOR
ENSMUSG00000028284	Map3k7	ENSMUST00000037607	ENSMUSP00000040307	TRANSLATION	protein_coding	-	CCDS51133.1	1	606	18	7.3	7.5	205.8	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000028284	Map3k7	ENSMUST00000147462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028284	Map3k7	ENSMUST00000080933	ENSMUSP00000079734	TRANSLATION	protein_coding	-	CCDS18014.1	1	579	18	7.3	7.5	205.8	0	-4,-6	-	-	21	PRINCIPAL:3
ENSMUSG00000028284	Map3k7	ENSMUST00000143138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028284	Map3k7	ENSMUST00000131310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028284	Map3k7	ENSMUST00000131114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028284	Map3k7	ENSMUST00000126632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040372	Gpr63	ENSMUST00000151006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040372	Gpr63	ENSMUST00000038920	ENSMUSP00000039312	TRANSLATION	protein_coding	-	CCDS18008.1	1	425	0	0.42	1.5	164.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000012117	Dhdds	ENSMUST00000105885	ENSMUSP00000101509	TRANSLATION	protein_coding	-	-	5	299	2	5.16	2.4	209.5	0	-4,-5	-	-	9.431	MINOR
ENSMUSG00000012117	Dhdds	ENSMUST00000105886	ENSMUSP00000101510	TRANSLATION	protein_coding	-	-	5	294	2	5.36	2.4	210.5	0	-4,-5	-	-	9.887	MINOR
ENSMUSG00000012117	Dhdds	ENSMUST00000130464	ENSMUSP00000121656	TRANSLATION	protein_coding	start	-	5	168	0	2.36	0	71.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012117	Dhdds	ENSMUST00000150729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012117	Dhdds	ENSMUST00000146241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012117	Dhdds	ENSMUST00000144668	ENSMUSP00000116098	TRANSLATION	protein_coding	-	CCDS18760.1	1	333	2	6.16	8.8	261.3	0	-4,-5	-	-	17	PRINCIPAL:2
ENSMUSG00000012117	Dhdds	ENSMUST00000105889	ENSMUSP00000101512	TRANSLATION	protein_coding	stop	-	5	258	2	6	0	261.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012117	Dhdds	ENSMUST00000012262	ENSMUSP00000012262	TRANSLATION	protein_coding	-	CCDS18760.1	1	333	2	6.16	8.8	261.3	0	-4,-5	-	-	17	PRINCIPAL:2
ENSMUSG00000012117	Dhdds	ENSMUST00000142660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012117	Dhdds	ENSMUST00000105887	ENSMUSP00000101511	TRANSLATION	protein_coding	-	-	1	334	2	6.16	8.8	261.3	0	-4,-5	-	-	17	ALTERNATIVE:1
ENSMUSG00000012117	Dhdds	ENSMUST00000134096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028218	Fam92a	ENSMUST00000126808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028218	Fam92a	ENSMUST00000126012	ENSMUSP00000133923	TRANSLATION	nonsense_mediated_decay	start	-	5	141	0	0	0	127.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028218	Fam92a	ENSMUST00000087052	ENSMUSP00000084284	TRANSLATION	protein_coding	-	CCDS80077.1	1	351	0	0	0.5	349.1	0	-4,-7	-	-	5.652	ALTERNATIVE:2
ENSMUSG00000028218	Fam92a	ENSMUST00000172728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028218	Fam92a	ENSMUST00000154416	ENSMUSP00000120369	TRANSLATION	protein_coding	start/stop	-	3	216	0	0	0	304.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028218	Fam92a	ENSMUST00000108285	ENSMUSP00000103920	TRANSLATION	protein_coding	-	CCDS51123.1	5	355	0	0	0.5	354.9	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000028218	Fam92a	ENSMUST00000177837	ENSMUSP00000135961	TRANSLATION	protein_coding	-	-	5	355	0	0	0.5	353.4	0	-4,-7	-	-	5.91	ALTERNATIVE:2
ENSMUSG00000028218	Fam92a	ENSMUST00000152219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042228	Lyn	ENSMUST00000041377	ENSMUSP00000038838	TRANSLATION	protein_coding	-	CCDS51109.1	1	512	18	10.1	11.5	461.8	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000042228	Lyn	ENSMUST00000137943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042228	Lyn	ENSMUST00000145083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042228	Lyn	ENSMUST00000103010	ENSMUSP00000100075	TRANSLATION	protein_coding	-	CCDS17939.1	1	491	18	9.95	9.5	461.8	0	-4,-5	-	-	20.13	PRINCIPAL:3
ENSMUSG00000055963	Triqk	ENSMUST00000143186	ENSMUSP00000139205	TRANSLATION	protein_coding	-	CCDS71348.1	1	86	0	0	16.1	136.3	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000055963	Triqk	ENSMUST00000156536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055963	Triqk	ENSMUST00000183345	ENSMUSP00000138966	TRANSLATION	protein_coding	-	CCDS71348.1	2	86	0	0	16.1	136.3	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000090053	Pakap	ENSMUST00000102904	ENSMUSP00000099968	TRANSLATION	protein_coding	-	CCDS18202.1	1	376	0	0	3.9	354.6	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000090053	Pakap	ENSMUST00000131201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090053	Pakap	ENSMUST00000102905	ENSMUSP00000099969	TRANSLATION	protein_coding	-	CCDS18202.1	5	376	0	0	3.9	354.6	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000090053	Pakap	ENSMUST00000142556	ENSMUSP00000129817	TRANSLATION	nonsense_mediated_decay	-	-	5	139	0	0	0	71.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042804	Gpr153	ENSMUST00000144035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042804	Gpr153	ENSMUST00000105650	ENSMUSP00000101275	TRANSLATION	protein_coding	-	-	5	608	0	0	3.9	55.1	6	-2,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000042804	Gpr153	ENSMUST00000055754	ENSMUSP00000052742	TRANSLATION	protein_coding	-	CCDS18996.1	1	631	0	0	1.5	54	6	-2,-5	-	-	6.052	PRINCIPAL:2
ENSMUSG00000042804	Gpr153	ENSMUST00000105651	ENSMUSP00000101276	TRANSLATION	protein_coding	-	CCDS18996.1	5	631	0	0	1.5	54	6	-2,-5	-	-	6.052	PRINCIPAL:2
ENSMUSG00000009863	Sdhb	ENSMUST00000129181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009863	Sdhb	ENSMUST00000125780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009863	Sdhb	ENSMUST00000010007	ENSMUSP00000010007	TRANSLATION	protein_coding	-	CCDS18858.1	1	282	40	7.025	9.5	0	0	-3,1	-	-	15	PRINCIPAL:1
ENSMUSG00000028648	Ndufs5	ENSMUST00000106206	ENSMUSP00000101812	TRANSLATION	protein_coding	-	CCDS18618.1	3	106	0	2.25	1.5	191.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028648	Ndufs5	ENSMUST00000106207	ENSMUSP00000101813	TRANSLATION	protein_coding	-	CCDS18618.1	1	106	0	2.25	1.5	191.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028648	Ndufs5	ENSMUST00000030401	ENSMUSP00000030401	TRANSLATION	protein_coding	-	CCDS18618.1	1	106	0	2.25	1.5	191.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028648	Ndufs5	ENSMUST00000137312	ENSMUSP00000123236	TRANSLATION	protein_coding	stop	-	2	91	0	1.5	0	175.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066149	Cdc26	ENSMUST00000107459	ENSMUSP00000103083	TRANSLATION	protein_coding	-	CCDS38774.1	2	85	0	1.75	12	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000066149	Cdc26	ENSMUST00000156854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066149	Cdc26	ENSMUST00000084525	ENSMUSP00000081573	TRANSLATION	protein_coding	-	CCDS38774.1	1	85	0	1.75	12	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000066149	Cdc26	ENSMUST00000134727	ENSMUSP00000120496	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	1.75	12	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028358	Zfp618	ENSMUST00000030043	ENSMUSP00000030043	TRANSLATION	protein_coding	-	-	1	374	12	0	0	0	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000028358	Zfp618	ENSMUST00000107415	ENSMUSP00000103038	TRANSLATION	protein_coding	-	-	5	953	16	0.14	4.6	0	0	-4,-5	-	-	13	ALTERNATIVE:1
ENSMUSG00000028358	Zfp618	ENSMUST00000064814	ENSMUSP00000069275	TRANSLATION	protein_coding	-	CCDS51203.1	5	860	16	0.14	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000028358	Zfp618	ENSMUST00000151324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078593	1700042G07Rik	ENSMUST00000106492	ENSMUSP00000102101	TRANSLATION	protein_coding	-	CCDS51276.1	1	90	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000078518	Gm13030	ENSMUST00000105805	ENSMUSP00000101431	TRANSLATION	protein_coding	-	CCDS84812.1	3	143	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028483	Snapc3	ENSMUST00000137512	ENSMUSP00000124468	TRANSLATION	nonsense_mediated_decay	-	-	1	131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028483	Snapc3	ENSMUST00000123262	ENSMUSP00000124038	TRANSLATION	nonsense_mediated_decay	-	-	1	407	4	0	1.5	262.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028483	Snapc3	ENSMUST00000071544	ENSMUSP00000102842	TRANSLATION	protein_coding	-	-	1	269	0	0	0	58.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028483	Snapc3	ENSMUST00000143533	ENSMUSP00000123793	TRANSLATION	nonsense_mediated_decay	-	-	1	407	4	0	1.5	262.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028483	Snapc3	ENSMUST00000130676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028483	Snapc3	ENSMUST00000030206	ENSMUSP00000030206	TRANSLATION	protein_coding	-	CCDS38792.1	1	407	4	0	1.5	262.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028483	Snapc3	ENSMUST00000124856	ENSMUSP00000124181	TRANSLATION	nonsense_mediated_decay	-	-	1	407	4	0	1.5	262.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028483	Snapc3	ENSMUST00000160742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028483	Snapc3	ENSMUST00000159518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110947	Olfr1333	ENSMUST00000214477	ENSMUSP00000154759	TRANSLATION	protein_coding	-	-	3	316	0	0.36	0.5	186.4	4	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000110947	Olfr1333	ENSMUST00000076019	ENSMUSP00000075398	TRANSLATION	protein_coding	-	CCDS18563.1	-	317	0	0.36	0.5	186.4	4	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000066148	Prpf4	ENSMUST00000148774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066148	Prpf4	ENSMUST00000084524	ENSMUSP00000081572	TRANSLATION	protein_coding	-	CCDS18239.1	1	521	0	12.58	10.8	188.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000094439	Gm21969	ENSMUST00000178644	ENSMUSP00000136776	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	289	0	1.8	1.5	42.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040935	Padi6	ENSMUST00000125046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040935	Padi6	ENSMUST00000038749	ENSMUSP00000044044	TRANSLATION	protein_coding	-	CCDS38936.1	1	682	3	12.618	1.5	774.8	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040935	Padi6	ENSMUST00000130267	ENSMUSP00000123490	TRANSLATION	protein_coding	stop	-	3	190	0	4.1	0	165	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000042333	Tnfrsf14	ENSMUST00000123514	ENSMUSP00000116757	TRANSLATION	protein_coding	-	CCDS19017.1	1	275	0	4.81	0.5	92.5	2	0,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000042333	Tnfrsf14	ENSMUST00000145296	ENSMUSP00000151279	TRANSLATION	protein_coding	stop	-	3	91	0	1.8	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000042333	Tnfrsf14	ENSMUST00000219534	ENSMUSP00000151575	TRANSLATION	protein_coding	-	-	1	276	0	4.81	0.5	92.5	2	0,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000042333	Tnfrsf14	ENSMUST00000137803	ENSMUSP00000151979	TRANSLATION	protein_coding	stop	-	3	108	0	2.66	0	69.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042333	Tnfrsf14	ENSMUST00000152687	ENSMUSP00000117890	TRANSLATION	protein_coding	stop	-	5	186	0	2.71	0	52.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000078686	Mup9	ENSMUST00000118759	ENSMUSP00000113461	TRANSLATION	protein_coding	-	-	5	235	0	5.13	0.5	110.3	0	4,-1	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000078686	Mup9	ENSMUST00000132461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078686	Mup9	ENSMUST00000122177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078686	Mup9	ENSMUST00000127151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078686	Mup9	ENSMUST00000122381	ENSMUSP00000113741	TRANSLATION	protein_coding	-	CCDS51187.2	2	180	0	5.16	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000078686	Mup9	ENSMUST00000107506	ENSMUSP00000103130	TRANSLATION	protein_coding	-	CCDS51187.2	1	180	0	5.16	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000078686	Mup9	ENSMUST00000137025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078686	Mup9	ENSMUST00000132829	ENSMUSP00000139730	TRANSLATION	protein_coding	-	-	5	94	0	2.83	0	72.6	0	-4,-5	-	-	5.076	MINOR
ENSMUSG00000000409	Lck	ENSMUST00000167288	ENSMUSP00000125777	TRANSLATION	protein_coding	-	CCDS51306.1	5	520	18	10.35	1.5	451.6	0	-4,-5	-	-	18.153	MINOR
ENSMUSG00000000409	Lck	ENSMUST00000123640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000409	Lck	ENSMUST00000132030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000409	Lck	ENSMUST00000134336	ENSMUSP00000119263	TRANSLATION	protein_coding	stop	-	2	92	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000409	Lck	ENSMUST00000127943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000409	Lck	ENSMUST00000139957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000409	Lck	ENSMUST00000102596	ENSMUSP00000099656	TRANSLATION	protein_coding	-	CCDS18697.1	1	509	18	10.35	10.8	451.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000000409	Lck	ENSMUST00000067240	ENSMUSP00000066209	TRANSLATION	protein_coding	-	CCDS18697.1	1	509	18	10.35	10.8	451.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028399	Ptprd	ENSMUST00000172811	ENSMUSP00000134190	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	2	0	59	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000134604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028399	Ptprd	ENSMUST00000173592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028399	Ptprd	ENSMUST00000174180	ENSMUSP00000133973	TRANSLATION	protein_coding	-	-	5	1890	22	29.11	4.8	1065.8	5	3,-2	-	-	18.268	ALTERNATIVE:1
ENSMUSG00000028399	Ptprd	ENSMUST00000174531	ENSMUSP00000134229	TRANSLATION	protein_coding	-	-	5	1495	22	28.03	2.4	861	5	3,-2	-	-	9.548	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000174832	ENSMUSP00000133580	TRANSLATION	protein_coding	stop	-	3	41	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000102834	ENSMUSP00000099898	TRANSLATION	protein_coding	-	-	1	1254	22	23.53	0	720.1	5	-4,-6	-	-	6	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000140422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000098005	ENSMUSP00000095614	TRANSLATION	protein_coding	-	-	5	1506	22	28.36	3.6	854.5	5	3,-2	-	-	10.524	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000173376	ENSMUSP00000133468	TRANSLATION	protein_coding	-	CCDS57280.1	1	1508	22	28.36	2.7	854.5	5	3,-2	-	-	10.287	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000107287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000173662	ENSMUSP00000133832	TRANSLATION	protein_coding	start/stop	-	3	271	0	3.55	0	66.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000156656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000212365	ENSMUSP00000148560	TRANSLATION	protein_coding	start/stop	-	5	296	0	4.45	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000129550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000174831	ENSMUSP00000133328	TRANSLATION	protein_coding	-	-	5	1505	22	28.36	3.6	854.5	5	3,-2	-	-	10.524	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000050757	ENSMUSP00000058466	TRANSLATION	protein_coding	-	-	5	1505	22	28.33	4.8	861	5	3,-2	-	-	10.78	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000174023	ENSMUSP00000133562	TRANSLATION	protein_coding	-	-	5	1502	22	28.36	3.6	855.6	5	3,-2	-	-	10.524	MINOR
ENSMUSG00000028399	Ptprd	ENSMUST00000138955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000084467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028399	Ptprd	ENSMUST00000107289	ENSMUSP00000102910	TRANSLATION	protein_coding	-	-	5	1912	22	29.44	3.6	1067	5	3,-2	-	-	18.684	PRINCIPAL:5
ENSMUSG00000028399	Ptprd	ENSMUST00000173560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028879	Stx12	ENSMUST00000137109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028879	Stx12	ENSMUST00000030698	ENSMUSP00000030698	TRANSLATION	protein_coding	-	CCDS18737.1	1	274	0	6.45	6.7	169.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025791	Pgm1	ENSMUST00000102783	ENSMUSP00000099844	TRANSLATION	protein_coding	-	-	1	580	17	10.75	7	290.4	0	-4,-5	-	-	18.726	MINOR
ENSMUSG00000025791	Pgm1	ENSMUST00000058351	ENSMUSP00000061227	TRANSLATION	protein_coding	-	CCDS18388.1	1	562	17	10.75	15.7	305.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000050141	Fam205c	ENSMUST00000055944	ENSMUSP00000060318	TRANSLATION	protein_coding	-	CCDS18082.1	1	370	0	0	0.5	86.8	1	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000050141	Fam205c	ENSMUST00000107978	ENSMUSP00000103612	TRANSLATION	protein_coding	-	-	1	371	0	0	0.5	86.8	1	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000050141	Fam205c	ENSMUST00000134400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050141	Fam205c	ENSMUST00000144112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028420	Tmem38b	ENSMUST00000150803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028420	Tmem38b	ENSMUST00000030127	ENSMUSP00000030127	TRANSLATION	protein_coding	-	CCDS18193.1	1	292	0	4.056	1.5	261.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028420	Tmem38b	ENSMUST00000144167	ENSMUSP00000120304	TRANSLATION	protein_coding	stop	-	3	163	0	2.982	0	212.9	3	-1,-4	-	-	-1	MINOR
ENSMUSG00000028420	Tmem38b	ENSMUST00000151206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034636	Zyg11b	ENSMUST00000130508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034636	Zyg11b	ENSMUST00000043616	ENSMUSP00000043844	TRANSLATION	protein_coding	-	CCDS18448.1	1	744	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000028669	Pithd1	ENSMUST00000123737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028669	Pithd1	ENSMUST00000123404	ENSMUSP00000117150	TRANSLATION	protein_coding	stop	-	3	65	0	0.9	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028669	Pithd1	ENSMUST00000150885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028669	Pithd1	ENSMUST00000105851	ENSMUSP00000101477	TRANSLATION	protein_coding	-	CCDS51330.1	1	211	0	3.02	2.7	144.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028669	Pithd1	ENSMUST00000125394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028669	Pithd1	ENSMUST00000133438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028669	Pithd1	ENSMUST00000147458	ENSMUSP00000119005	TRANSLATION	protein_coding	stop	-	3	118	0	1.72	1.2	62.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040270	Bach2	ENSMUST00000171600	ENSMUSP00000131592	TRANSLATION	protein_coding	-	CCDS51135.1	1	839	0	2.2	3.9	144.8	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000040270	Bach2	ENSMUST00000108180	ENSMUSP00000103815	TRANSLATION	protein_coding	-	CCDS51135.1	5	839	0	2.2	3.9	144.8	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000040270	Bach2	ENSMUST00000125263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040270	Bach2	ENSMUST00000149201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040270	Bach2	ENSMUST00000156430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040270	Bach2	ENSMUST00000146748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040270	Bach2	ENSMUST00000037416	ENSMUSP00000043693	TRANSLATION	protein_coding	-	-	5	716	0	2.2	0	144.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000076436	Oxct2a	ENSMUST00000102640	ENSMUSP00000099700	TRANSLATION	protein_coding	-	CCDS18617.1	-	520	16	1	1.5	383.3	0	3,4	-	-	18	PRINCIPAL:1
ENSMUSG00000028223	Decr1	ENSMUST00000029877	ENSMUSP00000029877	TRANSLATION	protein_coding	-	CCDS17985.1	1	335	33	7.25	3.9	111.6	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028223	Decr1	ENSMUST00000150464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028223	Decr1	ENSMUST00000154639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066058	Cldn19	ENSMUST00000094823	ENSMUSP00000092418	TRANSLATION	protein_coding	-	CCDS18578.1	1	211	0	3.75	3.9	146.3	3	-1,-4	-	-	13.338	MINOR
ENSMUSG00000066058	Cldn19	ENSMUST00000084309	ENSMUSP00000081334	TRANSLATION	protein_coding	-	CCDS18577.1	1	224	0	3.75	7.5	146.3	3	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000066150	Slc31a1	ENSMUST00000084526	ENSMUSP00000081574	TRANSLATION	protein_coding	-	CCDS18237.1	1	196	0	0	0.5	107.6	3	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000066150	Slc31a1	ENSMUST00000122092	ENSMUSP00000112822	TRANSLATION	protein_coding	-	-	1	130	0	0	0	43.2	1	-4,-5	-	-	2.136	MINOR
ENSMUSG00000028484	Psip1	ENSMUST00000107215	ENSMUSP00000102833	TRANSLATION	protein_coding	-	CCDS71412.1	1	331	0	3.8	8.8	58.1	0	-4,-5	-	-	3	MINOR
ENSMUSG00000028484	Psip1	ENSMUST00000030207	ENSMUSP00000030207	TRANSLATION	protein_coding	-	CCDS18299.1	1	528	0	7.05	2.7	160.4	0	-4,-5	-	-	12.654	PRINCIPAL:1
ENSMUSG00000028484	Psip1	ENSMUST00000107214	ENSMUSP00000102832	TRANSLATION	protein_coding	-	CCDS84749.1	5	327	0	3.8	7.5	58.1	0	-4,-5	-	-	2.499	MINOR
ENSMUSG00000028484	Psip1	ENSMUST00000126706	ENSMUSP00000120799	TRANSLATION	protein_coding	start	-	2	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028484	Psip1	ENSMUST00000152382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028484	Psip1	ENSMUST00000130626	ENSMUSP00000121950	TRANSLATION	protein_coding	stop	-	2	90	0	2.5	0	58.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028484	Psip1	ENSMUST00000144349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070908	Gm13288	ENSMUST00000094977	ENSMUSP00000092585	TRANSLATION	protein_coding	-	CCDS57286.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000100505	Gm13283	ENSMUST00000191112	ENSMUSP00000139768	TRANSLATION	protein_coding	-	CCDS57282.1	-	182	0	0.48	0.5	90.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000094271	Gm13290	ENSMUST00000177806	ENSMUSP00000136603	TRANSLATION	protein_coding	-	CCDS57283.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028608	Czib	ENSMUST00000030346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028608	Czib	ENSMUST00000106726	ENSMUSP00000102337	TRANSLATION	protein_coding	-	-	5	138	4	1.7362	0	135.7	0	-4,-6	-	-	11.386	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000030347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028608	Czib	ENSMUST00000128474	ENSMUSP00000115797	TRANSLATION	protein_coding	stop	-	3	66	2	0.44	0	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000156888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028608	Czib	ENSMUST00000106727	ENSMUSP00000102338	TRANSLATION	protein_coding	-	-	1	168	4	1.6462	0	157.8	0	-4,-6	-	-	12.454	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000127715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028608	Czib	ENSMUST00000125107	ENSMUSP00000119565	TRANSLATION	protein_coding	-	CCDS18442.1	1	196	4	2.0962	0.5	195.4	0	-4,-2	-	-	16	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000120473	ENSMUSP00000113866	TRANSLATION	protein_coding	-	-	2	155	4	1.6462	0	156.8	0	-4,-6	-	-	12.394	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000119394	ENSMUSP00000113991	TRANSLATION	protein_coding	-	-	3	153	4	1.6462	0	157.8	0	-4,-6	-	-	12.454	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000135454	ENSMUSP00000114234	TRANSLATION	protein_coding	-	CCDS84769.1	1	160	4	2.0962	14.9	195.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028608	Czib	ENSMUST00000132417	ENSMUSP00000117717	TRANSLATION	nonsense_mediated_decay	-	-	1	110	2	0.44	0	45.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000134254	ENSMUSP00000119309	TRANSLATION	protein_coding	start	-	3	57	0	0.86	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028608	Czib	ENSMUST00000153593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000140661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000134752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000136670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000153918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000155524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033365	Ipo13	ENSMUST00000036156	ENSMUSP00000035989	TRANSLATION	protein_coding	-	CCDS18542.1	1	963	0	17.58	7.5	125.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028331	Trmo	ENSMUST00000030015	ENSMUSP00000030015	TRANSLATION	protein_coding	-	CCDS84727.1	1	431	13	1.48	0.5	143.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028331	Trmo	ENSMUST00000086563	ENSMUSP00000083752	TRANSLATION	protein_coding	-	CCDS18148.1	1	488	13	1.48	0.5	143.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000028331	Trmo	ENSMUST00000151903	ENSMUSP00000119785	TRANSLATION	nonsense_mediated_decay	start	-	1	438	13	1.48	0	143.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028980	H6pd	ENSMUST00000153394	ENSMUSP00000115647	TRANSLATION	protein_coding	stop	-	3	171	10	0.42	0	58.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000028980	H6pd	ENSMUST00000030830	ENSMUSP00000030830	TRANSLATION	protein_coding	-	CCDS18967.1	1	797	20	3.26	3.9	526.2	0	4,-1	-	-	19.094	PRINCIPAL:3
ENSMUSG00000028980	H6pd	ENSMUST00000152907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028980	H6pd	ENSMUST00000084117	ENSMUSP00000081134	TRANSLATION	protein_coding	-	CCDS71524.1	1	789	20	3.26	6.3	526.2	0	4,-1	-	-	20	ALTERNATIVE:1
ENSMUSG00000028773	Fabp3	ENSMUST00000070532	ENSMUSP00000070709	TRANSLATION	protein_coding	-	CCDS18709.1	1	133	20	3.25	21.5	103.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028656	Cap1	ENSMUST00000128485	ENSMUSP00000114847	TRANSLATION	protein_coding	stop	-	3	164	0	2.5	0	182.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028656	Cap1	ENSMUST00000151041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028656	Cap1	ENSMUST00000140783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028656	Cap1	ENSMUST00000069533	ENSMUSP00000068260	TRANSLATION	protein_coding	-	CCDS18604.1	1	474	0	7.73	6.3	591.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028656	Cap1	ENSMUST00000106257	ENSMUSP00000101864	TRANSLATION	protein_coding	-	CCDS18604.1	1	474	0	7.73	6.3	591.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028656	Cap1	ENSMUST00000150919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028656	Cap1	ENSMUST00000106255	ENSMUSP00000101862	TRANSLATION	protein_coding	-	CCDS18604.1	1	474	0	7.73	6.3	591.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040720	Virma	ENSMUST00000059914	ENSMUSP00000058078	TRANSLATION	protein_coding	-	CCDS84705.1	1	1811	0	0	6.3	355.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040720	Virma	ENSMUST00000055372	ENSMUSP00000063188	TRANSLATION	protein_coding	-	-	1	1139	0	0	0	355.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000040720	Virma	ENSMUST00000108307	ENSMUSP00000103943	TRANSLATION	protein_coding	-	CCDS38693.1	5	1861	0	0	0.5	355.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000045699	Gm21411	ENSMUST00000049821	ENSMUSP00000135990	TRANSLATION	protein_coding	stop	-	1	136	0	1	0	73.3	0	-4,-7	-	-	-1	PRINCIPAL:3
ENSMUSG00000045699	Gm21411	ENSMUST00000238583	ENSMUSP00000158852	TRANSLATION	protein_coding	stop	-	-	373	19	2	0	193	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000028389	Zfp37	ENSMUST00000068822	ENSMUSP00000070463	TRANSLATION	protein_coding	-	CCDS71400.1	1	594	48	1.2	0.5	366.8	0	-4,-5	-	-	17.988	PRINCIPAL:2
ENSMUSG00000028389	Zfp37	ENSMUST00000212325	ENSMUSP00000148492	TRANSLATION	protein_coding	stop	-	5	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028389	Zfp37	ENSMUST00000222050	ENSMUSP00000152491	TRANSLATION	protein_coding	-	-	1	590	48	1.2	0.5	367	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028389	Zfp37	ENSMUST00000221329	ENSMUSP00000152266	TRANSLATION	protein_coding	-	-	2	591	48	1.2	0.5	366.8	0	-4,-5	-	-	17.988	ALTERNATIVE:2
ENSMUSG00000028389	Zfp37	ENSMUST00000220873	ENSMUSP00000152520	TRANSLATION	protein_coding	-	-	5	553	48	1.2	0.5	334.7	0	-4,-5	-	-	16.062	MINOR
ENSMUSG00000028389	Zfp37	ENSMUST00000222748	ENSMUSP00000152400	TRANSLATION	protein_coding	-	-	2	553	48	1.2	0.5	334.7	0	-4,-5	-	-	16.062	MINOR
ENSMUSG00000028389	Zfp37	ENSMUST00000129511	ENSMUSP00000152291	TRANSLATION	protein_coding	-	-	5	240	33	1	0	258.7	0	-4,-5	-	-	4.998	MINOR
ENSMUSG00000028936	Rpl22	ENSMUST00000139685	ENSMUSP00000118787	TRANSLATION	protein_coding	-	CCDS18999.1	1	128	0	0	7.5	180.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028936	Rpl22	ENSMUST00000150485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028936	Rpl22	ENSMUST00000142735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028936	Rpl22	ENSMUST00000103191	ENSMUSP00000099480	TRANSLATION	protein_coding	-	CCDS18999.1	1	128	0	0	7.5	180.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028936	Rpl22	ENSMUST00000188151	ENSMUSP00000140276	TRANSLATION	protein_coding	-	CCDS18999.1	1	128	0	0	7.5	180.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028936	Rpl22	ENSMUST00000156445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028936	Rpl22	ENSMUST00000126519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028936	Rpl22	ENSMUST00000127659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040964	Arhgef10l	ENSMUST00000140403	ENSMUSP00000117038	TRANSLATION	nonsense_mediated_decay	start	-	5	205	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000069623	ENSMUSP00000066249	TRANSLATION	protein_coding	-	CCDS51343.1	1	1241	0	5.07	2.9	135.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040964	Arhgef10l	ENSMUST00000105797	ENSMUSP00000101423	TRANSLATION	protein_coding	-	-	5	988	0	3.79	0	42.2	0	-4,-1	-	-	3.822	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000039204	ENSMUSP00000040531	TRANSLATION	protein_coding	-	CCDS51344.1	1	1275	0	4.82	2.9	135.8	0	-4,-5	-	-	11.502	PRINCIPAL:4
ENSMUSG00000040964	Arhgef10l	ENSMUST00000143614	ENSMUSP00000120437	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000105798	ENSMUSP00000101424	TRANSLATION	protein_coding	-	-	1	1040	0	5.07	1	135.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040964	Arhgef10l	ENSMUST00000138493	ENSMUSP00000119471	TRANSLATION	nonsense_mediated_decay	start	-	5	611	0	2.67	0	38	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000154979	ENSMUSP00000122667	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000105799	ENSMUSP00000101425	TRANSLATION	protein_coding	-	CCDS71507.1	5	1280	0	5.07	2.9	135.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040964	Arhgef10l	ENSMUST00000147426	ENSMUSP00000123642	TRANSLATION	protein_coding	stop	-	3	261	0	3.23	0	120.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040964	Arhgef10l	ENSMUST00000097820	ENSMUSP00000095431	TRANSLATION	protein_coding	-	CCDS51342.1	1	1236	0	4.82	2.9	135.8	0	-4,-5	-	-	11.502	ALTERNATIVE:2
ENSMUSG00000040964	Arhgef10l	ENSMUST00000125045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035069	Oma1	ENSMUST00000143399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035069	Oma1	ENSMUST00000035780	ENSMUSP00000045269	TRANSLATION	protein_coding	-	CCDS18412.1	1	521	5	1.98	0.5	103.3	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000035069	Oma1	ENSMUST00000133178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028614	Ndc1	ENSMUST00000030357	ENSMUSP00000136239	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028614	Ndc1	ENSMUST00000132950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028614	Ndc1	ENSMUST00000149366	ENSMUSP00000137180	TRANSLATION	nonsense_mediated_decay	-	-	5	541	0	0	0	302.4	6	-3,-7	-	-	-1	MINOR
ENSMUSG00000028614	Ndc1	ENSMUST00000150800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028614	Ndc1	ENSMUST00000125342	ENSMUSP00000136850	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028614	Ndc1	ENSMUST00000139560	ENSMUSP00000120365	TRANSLATION	protein_coding	-	CCDS18438.1	1	673	0	0	3.9	454.2	6	-3,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000045917	Tmem268	ENSMUST00000080336	ENSMUSP00000079211	TRANSLATION	protein_coding	-	CCDS18261.1	1	342	0	0	7.5	422.3	5	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045917	Tmem268	ENSMUST00000077709	ENSMUSP00000076891	TRANSLATION	protein_coding	-	CCDS18261.1	1	342	0	0	7.5	422.3	5	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045917	Tmem268	ENSMUST00000150360	ENSMUSP00000114729	TRANSLATION	protein_coding	stop	-	2	159	0	0	0	174.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000045917	Tmem268	ENSMUST00000124332	ENSMUSP00000120335	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	159.3	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000045917	Tmem268	ENSMUST00000126738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029030	Tprgl	ENSMUST00000134492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029030	Tprgl	ENSMUST00000133165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029030	Tprgl	ENSMUST00000136374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029030	Tprgl	ENSMUST00000030896	ENSMUSP00000030896	TRANSLATION	protein_coding	-	CCDS19011.1	1	266	0	0	1.5	98.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029030	Tprgl	ENSMUST00000105639	ENSMUSP00000101264	TRANSLATION	protein_coding	-	-	5	207	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000094035	Ldlrad2	ENSMUST00000238941	ENSMUSP00000158970	TRANSLATION	protein_coding	-	-	-	344	4	0	0.5	0	1	2,-2	-	-	4	PRINCIPAL:1
ENSMUSG00000094035	Ldlrad2	ENSMUST00000238480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094035	Ldlrad2	ENSMUST00000178923	ENSMUSP00000136854	TRANSLATION	protein_coding	-	CCDS18819.1	5	142	2	0	0.5	0	1	-4,-5	-	-	2	MINOR
ENSMUSG00000028977	Casz1	ENSMUST00000128881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028977	Casz1	ENSMUST00000094464	ENSMUSP00000092035	TRANSLATION	protein_coding	-	CCDS38973.1	1	1166	15	0	1.7	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028977	Casz1	ENSMUST00000139806	ENSMUSP00000120307	TRANSLATION	protein_coding	start	-	1	702	15	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028977	Casz1	ENSMUST00000147270	ENSMUSP00000116095	TRANSLATION	protein_coding	stop	-	5	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028977	Casz1	ENSMUST00000122222	ENSMUSP00000112978	TRANSLATION	protein_coding	-	CCDS51379.1	5	1762	36	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028977	Casz1	ENSMUST00000239035	ENSMUSP00000158908	TRANSLATION	protein_coding	start	-	-	626	21	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028977	Casz1	ENSMUST00000140617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110439	Mup22	ENSMUST00000211875	ENSMUSP00000148722	TRANSLATION	protein_coding	-	CCDS84742.1	1	181	0	5.08	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028532	Cachd1	ENSMUST00000097955	ENSMUSP00000095568	TRANSLATION	protein_coding	-	-	1	1210	0	4.795	0	92.4	1	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000028532	Cachd1	ENSMUST00000136430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028532	Cachd1	ENSMUST00000123475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028532	Cachd1	ENSMUST00000030257	ENSMUSP00000030257	TRANSLATION	protein_coding	-	CCDS18391.1	1	1288	0	4.795	1.5	92.4	1	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000035031	C8a	ENSMUST00000048947	ENSMUSP00000047606	TRANSLATION	protein_coding	-	CCDS84763.1	1	580	9	9.8	0.5	183.8	0	3,-2	-	-	15.606	MINOR
ENSMUSG00000035031	C8a	ENSMUST00000152146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035031	C8a	ENSMUST00000064873	ENSMUSP00000067541	TRANSLATION	protein_coding	-	CCDS18415.1	1	587	9	10.3	0.5	207	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035031	C8a	ENSMUST00000106808	ENSMUSP00000102420	TRANSLATION	protein_coding	-	CCDS71433.1	2	543	6	9.7	0.5	207	0	-4,-6	-	-	14.802	MINOR
ENSMUSG00000073991	Cnbd1	ENSMUST00000137780	ENSMUSP00000121576	TRANSLATION	protein_coding	stop	-	5	430	13	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000028480	Glipr2	ENSMUST00000030202	ENSMUSP00000030202	TRANSLATION	protein_coding	-	CCDS18117.1	1	154	2	3.75	19.3	81.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028480	Glipr2	ENSMUST00000107855	ENSMUSP00000103487	TRANSLATION	protein_coding	-	-	2	83	1	1.75	0	46.3	0	-4,-5	-	-	6.412	MINOR
ENSMUSG00000043633	Fam221b	ENSMUST00000134487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043633	Fam221b	ENSMUST00000056474	ENSMUSP00000057398	TRANSLATION	protein_coding	-	CCDS18107.1	1	487	0	0	0.5	66.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028847	Trappc3	ENSMUST00000126786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028847	Trappc3	ENSMUST00000030660	ENSMUSP00000030660	TRANSLATION	protein_coding	-	CCDS18647.1	1	180	0	4.5	19.5	127.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000028744	Pqlc2	ENSMUST00000172747	ENSMUSP00000134464	TRANSLATION	protein_coding	-	CCDS18843.2	5	293	0	0	2.7	101.9	5	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000028744	Pqlc2	ENSMUST00000105801	ENSMUSP00000101427	TRANSLATION	protein_coding	-	-	2	350	0	0	0.5	101.9	4	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000028744	Pqlc2	ENSMUST00000053862	ENSMUSP00000059772	TRANSLATION	protein_coding	-	CCDS18843.2	1	293	0	0	2.7	101.9	5	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000028744	Pqlc2	ENSMUST00000141007	ENSMUSP00000119780	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028744	Pqlc2	ENSMUST00000139840	ENSMUSP00000121362	TRANSLATION	nonsense_mediated_decay	-	-	1	293	0	0	2.7	101.9	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000066026	Dhrs3	ENSMUST00000142808	ENSMUSP00000122578	TRANSLATION	protein_coding	stop	-	3	146	19	3.3	0	107.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066026	Dhrs3	ENSMUST00000105744	ENSMUSP00000101370	TRANSLATION	protein_coding	-	-	1	236	24	3.78	0	56.2	0	-4,-7	-	-	7.092	MINOR
ENSMUSG00000066026	Dhrs3	ENSMUST00000128926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066026	Dhrs3	ENSMUST00000084184	ENSMUSP00000081200	TRANSLATION	nonsense_mediated_decay	-	-	1	123	15	2.13	0	56.2	1	2,-3	-	-	-1	MINOR
ENSMUSG00000066026	Dhrs3	ENSMUST00000154208	ENSMUSP00000122552	TRANSLATION	protein_coding	-	CCDS18912.1	1	302	30	4.78	12	138	1	2,-3	-	-	22	PRINCIPAL:1
ENSMUSG00000066026	Dhrs3	ENSMUST00000133265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066026	Dhrs3	ENSMUST00000171001	ENSMUSP00000126154	TRANSLATION	protein_coding	-	CCDS51368.1	5	276	30	4.78	0.5	138	0	-4,-7	-	-	18	MINOR
ENSMUSG00000050105	Grrp1	ENSMUST00000138366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050105	Grrp1	ENSMUST00000060050	ENSMUSP00000060143	TRANSLATION	protein_coding	-	CCDS38913.1	1	271	0	0	5.1	149.1	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000091297	Gm8439	ENSMUST00000238451	-	NO_TRANSLATION	lincRNA
ENSMUSG00000091297	Gm8439	ENSMUST00000171482	ENSMUSP00000130196	TRANSLATION	protein_coding	-	CCDS51293.1	2	96	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000029036	Atad3a	ENSMUST00000176043	ENSMUSP00000135405	TRANSLATION	nonsense_mediated_decay	-	-	5	211	0	0	0	178.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029036	Atad3a	ENSMUST00000175679	ENSMUSP00000135297	TRANSLATION	nonsense_mediated_decay	start	-	5	218	3	0	0	240.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029036	Atad3a	ENSMUST00000177066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029036	Atad3a	ENSMUST00000184913	ENSMUSP00000138808	TRANSLATION	nonsense_mediated_decay	start	-	3	127	0	0	0	147.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029036	Atad3a	ENSMUST00000030903	ENSMUSP00000030903	TRANSLATION	protein_coding	-	CCDS19037.1	1	591	14	3.53	1.5	438.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029036	Atad3a	ENSMUST00000176839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029036	Atad3a	ENSMUST00000184131	ENSMUSP00000138809	TRANSLATION	nonsense_mediated_decay	start	-	5	83	0	0	0	68.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029036	Atad3a	ENSMUST00000126725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029036	Atad3a	ENSMUST00000134317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028833	Ncdn	ENSMUST00000127079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028833	Ncdn	ENSMUST00000030637	ENSMUSP00000030637	TRANSLATION	protein_coding	-	CCDS18659.1	1	729	0	0	7.5	880.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028833	Ncdn	ENSMUST00000106116	ENSMUSP00000101722	TRANSLATION	protein_coding	-	CCDS18659.1	1	729	0	0	7.5	880.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028718	Stil	ENSMUST00000030490	ENSMUSP00000030490	TRANSLATION	protein_coding	-	CCDS18485.1	1	1262	0	1.4	0.5	650.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028718	Stil	ENSMUST00000130401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028718	Stil	ENSMUST00000147519	ENSMUSP00000120836	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028718	Stil	ENSMUST00000144316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028718	Stil	ENSMUST00000141933	ENSMUSP00000118849	TRANSLATION	nonsense_mediated_decay	-	-	1	399	0	0	0	565.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028718	Stil	ENSMUST00000129957	ENSMUSP00000123385	TRANSLATION	protein_coding	stop	-	1	640	0	1.4	0	620.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078625	Gm12789	ENSMUST00000151553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078625	Gm12789	ENSMUST00000106915	ENSMUSP00000102528	TRANSLATION	protein_coding	-	CCDS38823.1	3	164	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000078625	Gm12789	ENSMUST00000106914	ENSMUSP00000102527	TRANSLATION	protein_coding	-	CCDS38823.1	3	164	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028345	Tex10	ENSMUST00000155750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028345	Tex10	ENSMUST00000155905	ENSMUSP00000114669	TRANSLATION	nonsense_mediated_decay	start	-	1	338	0	0	0	84.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028345	Tex10	ENSMUST00000164866	ENSMUSP00000132498	TRANSLATION	protein_coding	-	CCDS38760.1	1	928	0	0	6.3	84.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028345	Tex10	ENSMUST00000132911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028345	Tex10	ENSMUST00000138531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028345	Tex10	ENSMUST00000030030	ENSMUSP00000030030	TRANSLATION	protein_coding	-	CCDS38760.1	1	928	0	0	6.3	84.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028948	Nol9	ENSMUST00000103197	ENSMUSP00000099486	TRANSLATION	protein_coding	-	CCDS18986.1	1	671	7	0	0.5	118.1	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000028948	Nol9	ENSMUST00000131696	ENSMUSP00000146142	TRANSLATION	nonsense_mediated_decay	start	-	1	361	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028948	Nol9	ENSMUST00000147797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028948	Nol9	ENSMUST00000084116	ENSMUSP00000081133	TRANSLATION	protein_coding	-	CCDS51389.1	1	714	7	0	0.5	118.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000028948	Nol9	ENSMUST00000105663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073768	Olfr1330	ENSMUST00000215186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073768	Olfr1330	ENSMUST00000216386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073768	Olfr1330	ENSMUST00000105035	ENSMUSP00000100652	TRANSLATION	protein_coding	-	CCDS18565.1	3	315	0	0.42	2.7	180.8	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073768	Olfr1330	ENSMUST00000094830	ENSMUSP00000092425	TRANSLATION	protein_coding	-	CCDS18565.1	-	315	0	0.42	2.7	180.8	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073768	Olfr1330	ENSMUST00000106361	ENSMUSP00000101968	TRANSLATION	protein_coding	-	CCDS18565.1	5	315	0	0.42	2.7	180.8	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028878	Fam76a	ENSMUST00000148667	ENSMUSP00000121892	TRANSLATION	protein_coding	stop	-	2	129	6	0	0	212.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028878	Fam76a	ENSMUST00000097856	ENSMUSP00000095468	TRANSLATION	protein_coding	-	CCDS51320.1	1	278	10	0	2.9	353.4	0	-4,-7	-	-	11.192	MINOR
ENSMUSG00000028878	Fam76a	ENSMUST00000030696	ENSMUSP00000030696	TRANSLATION	protein_coding	-	CCDS18738.1	1	307	10	0	12.8	377.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000028797	Tmem234	ENSMUST00000174073	ENSMUSP00000133325	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000173937	ENSMUSP00000133412	TRANSLATION	nonsense_mediated_decay	-	-	2	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000102591	ENSMUSP00000099651	TRANSLATION	protein_coding	-	CCDS18699.1	1	140	0	0	7.5	146.2	3	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028797	Tmem234	ENSMUST00000173758	ENSMUSP00000134588	TRANSLATION	protein_coding	-	-	2	131	0	0	0	104.7	3	3,-2	-	-	3.51	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000144304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028797	Tmem234	ENSMUST00000127919	ENSMUSP00000123153	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000145345	ENSMUSP00000122893	TRANSLATION	nonsense_mediated_decay	start	-	3	60	0	0	0	41.3	0	3,-3	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000135628	ENSMUSP00000120682	TRANSLATION	nonsense_mediated_decay	-	-	2	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000129515	ENSMUSP00000117184	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000173507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028797	Tmem234	ENSMUST00000181579	ENSMUSP00000137989	TRANSLATION	protein_coding	stop	-	2	138	0	0	7.5	136.9	1	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000174610	ENSMUSP00000134104	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	41.8	0	3,-3	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000150110	ENSMUSP00000122513	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	41.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000172774	ENSMUSP00000133502	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000174350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028797	Tmem234	ENSMUST00000174819	ENSMUSP00000133695	TRANSLATION	nonsense_mediated_decay	-	-	2	57	0	0	0	41.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000137090	ENSMUSP00000117568	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000152126	ENSMUSP00000120224	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000172635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028797	Tmem234	ENSMUST00000151969	ENSMUSP00000120878	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000028797	Tmem234	ENSMUST00000173728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111410	Gm49337	ENSMUST00000216692	ENSMUSP00000150163	TRANSLATION	protein_coding,RT	-	-	5	502	0	8.75	0	343.1	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000028755	Cda	ENSMUST00000030535	ENSMUSP00000030535	TRANSLATION	protein_coding	-	CCDS18826.1	1	146	5	3.5	7.5	59.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028755	Cda	ENSMUST00000144986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070619	Gm13119	ENSMUST00000094526	ENSMUSP00000092103	TRANSLATION	protein_coding	-	CCDS18904.1	1	481	0	0	1.5	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028607	Cpt2	ENSMUST00000131644	ENSMUSP00000114362	TRANSLATION	protein_coding	stop	-	5	88	0	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028607	Cpt2	ENSMUST00000106719	ENSMUSP00000102330	TRANSLATION	protein_coding	stop	-	5	265	0	3.75	0	172.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028607	Cpt2	ENSMUST00000030345	ENSMUSP00000030345	TRANSLATION	protein_coding	-	CCDS18443.1	1	658	11	6.75	3.9	657.4	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028607	Cpt2	ENSMUST00000141738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028607	Cpt2	ENSMUST00000106720	ENSMUSP00000102331	TRANSLATION	protein_coding	-	-	2	223	5	3.75	0	113.3	0	-4,-1	-	-	1.998	MINOR
ENSMUSG00000028607	Cpt2	ENSMUST00000175651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003411	Rab3b	ENSMUST00000106651	ENSMUSP00000102262	TRANSLATION	protein_coding	-	-	5	228	19	4.198	1	190.5	0	-4,-5	-	-	17.232	MINOR
ENSMUSG00000003411	Rab3b	ENSMUST00000003502	ENSMUSP00000003502	TRANSLATION	protein_coding	-	CCDS18459.1	1	219	19	4	11	203.3	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000003411	Rab3b	ENSMUST00000106650	ENSMUSP00000102261	TRANSLATION	protein_coding	-	CCDS18459.1	1	219	19	4	11	203.3	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000003411	Rab3b	ENSMUST00000157062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039953	Clstn1	ENSMUST00000151895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039953	Clstn1	ENSMUST00000137232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039953	Clstn1	ENSMUST00000105691	ENSMUSP00000101316	TRANSLATION	protein_coding	-	CCDS71522.1	1	969	13	2.68	0.5	67.9	1	4,-2	-	-	17.46	ALTERNATIVE:2
ENSMUSG00000039953	Clstn1	ENSMUST00000039144	ENSMUSP00000036962	TRANSLATION	protein_coding	-	CCDS18963.1	1	979	13	2.944	1.7	67.9	1	4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000028906	Epb41	ENSMUST00000136761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028906	Epb41	ENSMUST00000238852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028906	Epb41	ENSMUST00000151746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028906	Epb41	ENSMUST00000155990	ENSMUSP00000116599	TRANSLATION	protein_coding	start	-	3	197	0	0.6	0	170	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000141291	ENSMUSP00000120236	TRANSLATION	protein_coding	-	-	5	767	0	7.768	0	369.3	0	-4,-5	-	-	4.8	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000146021	ENSMUSP00000158714	TRANSLATION	protein_coding	-	-	1	594	0	8.368	2.9	534.6	0	-4,-5	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000028906	Epb41	ENSMUST00000144754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028906	Epb41	ENSMUST00000105974	ENSMUSP00000101594	TRANSLATION	protein_coding	-	-	5	769	0	7.368	0	471	0	-4,-5	-	-	5.904	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000137846	ENSMUSP00000123623	TRANSLATION	protein_coding	start	-	5	667	0	8.368	0	539.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000105975	ENSMUSP00000101595	TRANSLATION	protein_coding	-	-	5	869	0	8.368	0	539.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028906	Epb41	ENSMUST00000105970	ENSMUSP00000101590	TRANSLATION	protein_coding	-	-	5	639	0	8.368	0	469.7	0	-4,-5	-	-	7.824	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000212761	ENSMUSP00000148515	TRANSLATION	protein_coding	start	-	1	476	0	5.168	0	301	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000131953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028906	Epb41	ENSMUST00000135579	ENSMUSP00000121764	TRANSLATION	protein_coding	start	-	1	375	0	1.068	0	246.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000105972	ENSMUSP00000101592	TRANSLATION	protein_coding	-	CCDS18717.1	5	858	0	8.368	0.5	539.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028906	Epb41	ENSMUST00000105981	ENSMUSP00000101601	TRANSLATION	protein_coding	-	CCDS18717.1	5	858	0	8.368	0.5	539.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028906	Epb41	ENSMUST00000054917	ENSMUSP00000060375	TRANSLATION	protein_coding	-	CCDS51317.1	5	804	0	8.368	2.9	534.6	0	-4,-5	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000028906	Epb41	ENSMUST00000084253	ENSMUSP00000081274	TRANSLATION	protein_coding	-	CCDS51317.1	1	804	0	8.368	2.9	534.6	0	-4,-5	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000028906	Epb41	ENSMUST00000146443	ENSMUSP00000122234	TRANSLATION	protein_coding	start	-	5	250	0	0.87	0	251	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028906	Epb41	ENSMUST00000030739	ENSMUSP00000030739	TRANSLATION	protein_coding	-	CCDS18717.1	5	858	0	8.368	0.5	539.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000028539	Artn	ENSMUST00000150612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028539	Artn	ENSMUST00000133703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028539	Artn	ENSMUST00000070816	ENSMUSP00000064521	TRANSLATION	protein_coding	-	CCDS18543.1	1	224	0	1	1.5	47.1	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028539	Artn	ENSMUST00000097913	ENSMUSP00000095526	TRANSLATION	protein_coding	-	CCDS18543.1	1	224	0	1	1.5	47.1	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051675	Trim32	ENSMUST00000155978	ENSMUSP00000119579	TRANSLATION	protein_coding	stop	-	3	136	15	1	0	46.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051675	Trim32	ENSMUST00000156922	ENSMUSP00000121949	TRANSLATION	protein_coding	stop	-	5	183	15	1	0	69.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051675	Trim32	ENSMUST00000107366	ENSMUSP00000102989	TRANSLATION	protein_coding	-	CCDS18270.1	1	655	15	1.14	6.3	138.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000051675	Trim32	ENSMUST00000050850	ENSMUSP00000062277	TRANSLATION	protein_coding	-	CCDS18270.1	1	655	15	1.14	6.3	138.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000033423	Eri3	ENSMUST00000125312	ENSMUSP00000115520	TRANSLATION	protein_coding	start	-	1	125	4	2.83	0	61.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033423	Eri3	ENSMUST00000146384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033423	Eri3	ENSMUST00000134453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033423	Eri3	ENSMUST00000134379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033423	Eri3	ENSMUST00000037127	ENSMUSP00000042796	TRANSLATION	protein_coding	-	CCDS18535.1	1	337	11	5.93	7.5	144.1	0	-3,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033423	Eri3	ENSMUST00000144373	ENSMUSP00000117034	TRANSLATION	protein_coding	stop	-	2	163	6	1.68	0	45.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060288	Ppih	ENSMUST00000106317	ENSMUSP00000101924	TRANSLATION	protein_coding	-	CCDS51288.1	1	188	8	5.28	0.5	151.1	0	-4,-5	-	-	16.092	MINOR
ENSMUSG00000060288	Ppih	ENSMUST00000106319	ENSMUSP00000101926	TRANSLATION	protein_coding	-	-	3	134	3	4.33	0	83.3	0	-4,-5	-	-	6.372	MINOR
ENSMUSG00000060288	Ppih	ENSMUST00000106321	ENSMUSP00000101928	TRANSLATION	protein_coding	-	CCDS18580.1	1	177	8	5.83	17.5	164.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060288	Ppih	ENSMUST00000106318	ENSMUSP00000101925	TRANSLATION	protein_coding	-	CCDS18580.1	1	177	8	5.83	17.5	164.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060288	Ppih	ENSMUST00000147077	ENSMUSP00000118407	TRANSLATION	protein_coding	start	-	5	158	8	5.33	0	163.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060288	Ppih	ENSMUST00000056458	ENSMUSP00000051221	TRANSLATION	protein_coding	-	CCDS18580.1	1	177	8	5.83	17.5	164.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028901	Gmeb1	ENSMUST00000105965	ENSMUSP00000101585	TRANSLATION	protein_coding	-	CCDS18720.1	1	562	4	3	8.8	81.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028901	Gmeb1	ENSMUST00000105964	ENSMUSP00000101584	TRANSLATION	protein_coding	-	CCDS18720.1	1	562	4	3	8.8	81.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028901	Gmeb1	ENSMUST00000168553	ENSMUSP00000131331	TRANSLATION	protein_coding	-	CCDS18720.1	5	562	4	3	8.8	81.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028901	Gmeb1	ENSMUST00000131763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028901	Gmeb1	ENSMUST00000030733	ENSMUSP00000030733	TRANSLATION	protein_coding	-	CCDS18720.1	1	562	4	3	8.8	81.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028901	Gmeb1	ENSMUST00000125534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028901	Gmeb1	ENSMUST00000126542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041616	Nppa	ENSMUST00000103230	ENSMUSP00000099520	TRANSLATION	protein_coding	-	CCDS18927.1	1	152	0	0	7.5	40.5	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028843	Sh3bgrl3	ENSMUST00000105879	ENSMUSP00000101505	TRANSLATION	protein_coding	-	-	3	37	0	1.25	0	23.9	0	-4,-6	-	-	3.354	MINOR
ENSMUSG00000028843	Sh3bgrl3	ENSMUST00000136408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028843	Sh3bgrl3	ENSMUST00000030651	ENSMUSP00000030651	TRANSLATION	protein_coding	-	CCDS38910.1	1	93	0	2.25	16.3	123.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000073700	Klhl21	ENSMUST00000097773	ENSMUSP00000095380	TRANSLATION	protein_coding	-	CCDS18983.1	1	597	0	2.07	7.5	288.8	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036856	Wnt4	ENSMUST00000045747	ENSMUSP00000036580	TRANSLATION	protein_coding	-	CCDS18815.1	1	351	0	2.88	8.3	421.2	0	0,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029009	Mthfr	ENSMUST00000097788	ENSMUSP00000095395	TRANSLATION	protein_coding	-	CCDS18929.1	1	654	23	3.28	2.7	393.9	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000029009	Mthfr	ENSMUST00000141283	ENSMUSP00000116239	TRANSLATION	protein_coding	stop	-	3	194	13	1.48	0	182.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029009	Mthfr	ENSMUST00000145115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029009	Mthfr	ENSMUST00000156113	ENSMUSP00000116840	TRANSLATION	nonsense_mediated_decay	start	-	1	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029009	Mthfr	ENSMUST00000152498	ENSMUSP00000117095	TRANSLATION	nonsense_mediated_decay	start	-	1	670	23	3.28	0	393.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029009	Mthfr	ENSMUST00000069604	ENSMUSP00000069774	TRANSLATION	protein_coding	-	CCDS51376.1	1	695	23	3.28	2.7	393.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000029009	Mthfr	ENSMUST00000125978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028991	Mtor	ENSMUST00000103221	ENSMUSP00000099510	TRANSLATION	protein_coding	-	CCDS18937.1	1	2549	0	53.75	6.3	952.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028991	Mtor	ENSMUST00000129715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028991	Mtor	ENSMUST00000123566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028991	Mtor	ENSMUST00000057580	ENSMUSP00000054164	TRANSLATION	protein_coding	-	-	1	256	0	4.225	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028370	Pappa	ENSMUST00000084501	ENSMUSP00000081545	TRANSLATION	protein_coding	-	CCDS18267.1	1	1624	4	2.74	3.9	190.4	0	4,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000037752	Xkr8	ENSMUST00000150104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037752	Xkr8	ENSMUST00000045550	ENSMUSP00000041205	TRANSLATION	protein_coding	-	CCDS18732.1	1	401	0	0	1.5	284.2	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000037752	Xkr8	ENSMUST00000143642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042489	Clspn	ENSMUST00000147675	ENSMUSP00000116699	TRANSLATION	protein_coding	stop	-	3	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042489	Clspn	ENSMUST00000129795	ENSMUSP00000120683	TRANSLATION	protein_coding	start/stop	-	3	261	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042489	Clspn	ENSMUST00000126512	ENSMUSP00000119437	TRANSLATION	protein_coding	start/stop	-	1	387	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042489	Clspn	ENSMUST00000146944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042489	Clspn	ENSMUST00000128202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042489	Clspn	ENSMUST00000048391	ENSMUSP00000045344	TRANSLATION	protein_coding	-	CCDS18655.1	1	1315	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042489	Clspn	ENSMUST00000123695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043155	Hpdl	ENSMUST00000055436	ENSMUSP00000062327	TRANSLATION	protein_coding	-	CCDS18519.1	-	371	3	0.42	3.9	0	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000028469	Npr2	ENSMUST00000144418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028469	Npr2	ENSMUST00000123351	ENSMUSP00000117761	TRANSLATION	protein_coding	start/stop	-	5	176	0	3.3	0	43.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000028469	Npr2	ENSMUST00000151603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028469	Npr2	ENSMUST00000107874	ENSMUSP00000103506	TRANSLATION	protein_coding	-	-	5	1033	0	12.84	0	411.7	3	1,-2	-	-	0.798	MINOR
ENSMUSG00000028469	Npr2	ENSMUST00000030191	ENSMUSP00000030191	TRANSLATION	protein_coding	-	CCDS18105.1	1	1047	0	15.44	6.3	517.3	3	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028469	Npr2	ENSMUST00000128549	ENSMUSP00000114385	TRANSLATION	protein_coding	start	-	1	613	0	10.11	0	364.9	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000028469	Npr2	ENSMUST00000145817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028469	Npr2	ENSMUST00000130093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028469	Npr2	ENSMUST00000143160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028469	Npr2	ENSMUST00000123883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028327	Stra6l	ENSMUST00000128947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028327	Stra6l	ENSMUST00000107782	ENSMUSP00000103411	TRANSLATION	protein_coding	-	CCDS80094.1	1	530	0	5.69	1.7	642.2	10	-4,-5	-	-	3.9	MINOR
ENSMUSG00000028327	Stra6l	ENSMUST00000030011	ENSMUSP00000030011	TRANSLATION	protein_coding	-	CCDS18141.1	1	621	0	6.74	1.5	744.3	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028327	Stra6l	ENSMUST00000107783	ENSMUSP00000103412	TRANSLATION	protein_coding	-	CCDS18141.1	5	621	0	6.74	1.5	744.3	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028327	Stra6l	ENSMUST00000165478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044801	Olfr159	ENSMUST00000053931	ENSMUSP00000060784	TRANSLATION	protein_coding	-	CCDS18112.1	-	319	0	0.36	7.6	201.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000070605	Zfp992	ENSMUST00000105733	ENSMUSP00000101359	TRANSLATION	protein_coding	-	CCDS57310.1	3	573	48	1.6	0.5	316.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028919	Arhgef19	ENSMUST00000147903	ENSMUSP00000120088	TRANSLATION	protein_coding	start/stop	-	3	221	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028919	Arhgef19	ENSMUST00000141834	ENSMUSP00000115856	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028919	Arhgef19	ENSMUST00000138096	ENSMUSP00000116274	TRANSLATION	protein_coding	stop	-	5	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028919	Arhgef19	ENSMUST00000140536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028919	Arhgef19	ENSMUST00000184162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028919	Arhgef19	ENSMUST00000006618	ENSMUSP00000006618	TRANSLATION	protein_coding	-	CCDS18868.1	1	802	0	5.7	0.5	147.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028919	Arhgef19	ENSMUST00000125392	ENSMUSP00000118740	TRANSLATION	protein_coding	stop	-	3	153	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028919	Arhgef19	ENSMUST00000135623	ENSMUSP00000119846	TRANSLATION	protein_coding	stop	-	5	251	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050608	Micos10	ENSMUST00000143971	ENSMUSP00000117583	TRANSLATION	protein_coding	-	CCDS51339.1	1	76	0	0	19.5	84.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000050608	Micos10	ENSMUST00000154642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050608	Micos10	ENSMUST00000063040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050608	Micos10	ENSMUST00000123488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029029	Wrap73	ENSMUST00000030895	ENSMUSP00000030895	TRANSLATION	protein_coding	-	CCDS19010.1	1	462	0	4.77	3.9	42.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000029029	Wrap73	ENSMUST00000132562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029029	Wrap73	ENSMUST00000146734	ENSMUSP00000118548	TRANSLATION	protein_coding	start/stop	-	5	133	0	1.23	0	42.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029029	Wrap73	ENSMUST00000142665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110970	Olfr156	ENSMUST00000079465	ENSMUSP00000078431	TRANSLATION	protein_coding	-	CCDS18113.1	-	318	0	0.36	8.8	197.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000110970	Olfr156	ENSMUST00000079234	ENSMUSP00000078226	TRANSLATION	protein_coding	-	CCDS18113.1	5	318	0	0.36	8.8	197.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000110970	Olfr156	ENSMUST00000214843	ENSMUSP00000150717	TRANSLATION	protein_coding	-	CCDS18113.1	5	318	0	0.36	8.8	197.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000110970	Olfr156	ENSMUST00000215406	ENSMUSP00000148995	TRANSLATION	protein_coding	-	CCDS18113.1	5	318	0	0.36	8.8	197.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095498	Ifna1	ENSMUST00000094972	ENSMUSP00000092580	TRANSLATION	protein_coding	-	CCDS18347.1	-	189	3	1	3.9	211.3	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000000411	Tssk3	ENSMUST00000000421	ENSMUSP00000000421	TRANSLATION	protein_coding	-	CCDS18693.1	1	268	19	2	10.8	222.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029007	Agtrap	ENSMUST00000030865	ENSMUSP00000030865	TRANSLATION	protein_coding	-	CCDS18930.1	1	161	0	0	3.9	223.9	0	-1,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000029007	Agtrap	ENSMUST00000137393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029007	Agtrap	ENSMUST00000152323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028850	Gpatch3	ENSMUST00000154648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028850	Gpatch3	ENSMUST00000030662	ENSMUSP00000030662	TRANSLATION	protein_coding	-	CCDS18752.1	1	525	0	0	2.9	32.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034871	Fam151a	ENSMUST00000047620	ENSMUSP00000047860	TRANSLATION	protein_coding	-	CCDS18425.1	1	608	0	0	1.5	496.6	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028578	Caap1	ENSMUST00000153294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028578	Caap1	ENSMUST00000030313	ENSMUSP00000030313	TRANSLATION	protein_coding	-	CCDS18358.1	1	356	0	0	1.5	96.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040706	Agmat	ENSMUST00000038161	ENSMUSP00000040853	TRANSLATION	protein_coding	-	CCDS38941.1	1	358	2	5.6	0.5	275.4	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000025418	Bsnd	ENSMUST00000054472	ENSMUSP00000049563	TRANSLATION	protein_coding	-	CCDS18419.1	1	307	3	0	1.5	354.1	0	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000073889	Il11ra1	ENSMUST00000155538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000108040	ENSMUSP00000103675	TRANSLATION	protein_coding	-	CCDS18071.1	5	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000073889	Il11ra1	ENSMUST00000145445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000140894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000146608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000142059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000108042	ENSMUSP00000103677	TRANSLATION	protein_coding	-	CCDS18071.1	1	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000073889	Il11ra1	ENSMUST00000152748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073889	Il11ra1	ENSMUST00000108041	ENSMUSP00000103676	TRANSLATION	protein_coding	-	CCDS18071.1	1	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000073889	Il11ra1	ENSMUST00000098132	ENSMUSP00000095736	TRANSLATION	protein_coding	-	CCDS18071.1	1	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028597	Gpx7	ENSMUST00000030332	ENSMUSP00000030332	TRANSLATION	protein_coding	-	CCDS18450.1	1	186	0	3.5	1.5	130.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028597	Gpx7	ENSMUST00000184609	ENSMUSP00000139335	TRANSLATION	protein_coding	-	-	3	59	0	1	0	0	0	3,-2	-	-	1.002	MINOR
ENSMUSG00000028822	Tmem50a	ENSMUST00000030626	ENSMUSP00000030626	TRANSLATION	protein_coding	-	CCDS18779.1	1	157	0	0	16.8	158.7	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000028822	Tmem50a	ENSMUST00000105863	ENSMUSP00000101489	TRANSLATION	protein_coding	-	CCDS18779.1	3	157	0	0	16.8	158.7	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000028871	Rspo1	ENSMUST00000030687	ENSMUSP00000030687	TRANSLATION	protein_coding	-	CCDS18633.1	1	265	0	2	7.5	183.8	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028871	Rspo1	ENSMUST00000140698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078552	Dcdc2b	ENSMUST00000179209	ENSMUSP00000135913	TRANSLATION	protein_coding	-	CCDS57299.1	5	287	0	2.89	0.5	125.8	0	-4,0	-	-	10.8	PRINCIPAL:1
ENSMUSG00000078552	Dcdc2b	ENSMUST00000143374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078552	Dcdc2b	ENSMUST00000106037	ENSMUSP00000101653	TRANSLATION	protein_coding	start	-	5	340	0	3.49	1.5	125.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028393	Alad	ENSMUST00000107444	ENSMUSP00000103068	TRANSLATION	protein_coding	-	CCDS18243.1	1	330	5	8.5	9.6	423.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000028393	Alad	ENSMUST00000030090	ENSMUSP00000030090	TRANSLATION	protein_coding	-	CCDS18243.1	1	330	5	8.5	9.6	423.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000028393	Alad	ENSMUST00000137448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063172	Hspb11	ENSMUST00000156934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063172	Hspb11	ENSMUST00000046558	ENSMUSP00000048810	TRANSLATION	protein_coding	-	CCDS18435.1	1	143	5	4.25	7.6	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000063172	Hspb11	ENSMUST00000152717	ENSMUSP00000118617	TRANSLATION	protein_coding	stop	-	2	143	5	4.25	7.6	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063172	Hspb11	ENSMUST00000137911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063172	Hspb11	ENSMUST00000106749	ENSMUSP00000102360	TRANSLATION	protein_coding	-	CCDS18435.1	1	143	5	4.25	7.6	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000111611	Olfr157	ENSMUST00000214281	ENSMUSP00000149336	TRANSLATION	protein_coding	-	CCDS18114.1	5	318	0	0.3	7.6	195.2	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000111611	Olfr157	ENSMUST00000215442	ENSMUSP00000150429	TRANSLATION	protein_coding	-	CCDS18114.1	-	318	0	0.3	7.6	195.2	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028759	Hp1bp3	ENSMUST00000155344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028759	Hp1bp3	ENSMUST00000105826	ENSMUSP00000101452	TRANSLATION	protein_coding	-	-	5	554	0	2.68	0.5	174.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000028759	Hp1bp3	ENSMUST00000105825	ENSMUSP00000101451	TRANSLATION	protein_coding	-	-	5	516	0	2.68	0.5	174.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028759	Hp1bp3	ENSMUST00000105827	ENSMUSP00000101453	TRANSLATION	protein_coding	-	-	5	554	0	2.68	0.5	174.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000028759	Hp1bp3	ENSMUST00000142420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028759	Hp1bp3	ENSMUST00000030541	ENSMUSP00000030541	TRANSLATION	protein_coding	-	CCDS38927.1	1	554	0	2.68	0.5	172.6	0	-4,-6	-	-	11.91	PRINCIPAL:3
ENSMUSG00000028759	Hp1bp3	ENSMUST00000130071	ENSMUSP00000123467	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028759	Hp1bp3	ENSMUST00000137851	ENSMUSP00000118913	TRANSLATION	protein_coding	stop	-	5	208	0	2.68	0	65.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028759	Hp1bp3	ENSMUST00000124305	ENSMUSP00000120587	TRANSLATION	protein_coding	stop	-	5	165	0	1.93	0	39.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028759	Hp1bp3	ENSMUST00000165861	ENSMUSP00000132614	TRANSLATION	protein_coding	-	CCDS38927.1	1	554	0	2.68	0.5	172.6	0	-4,-6	-	-	11.91	PRINCIPAL:3
ENSMUSG00000028759	Hp1bp3	ENSMUST00000137865	ENSMUSP00000117216	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028759	Hp1bp3	ENSMUST00000148681	ENSMUSP00000122005	TRANSLATION	protein_coding	stop	-	2	292	0	1.75	0	161.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028759	Hp1bp3	ENSMUST00000097836	ENSMUSP00000095447	TRANSLATION	protein_coding	-	CCDS51334.1	1	516	0	2.68	0.5	172.6	0	-4,-7	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000028759	Hp1bp3	ENSMUST00000154581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028633	Ctps	ENSMUST00000140891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028633	Ctps	ENSMUST00000147980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028633	Ctps	ENSMUST00000030381	ENSMUSP00000030381	TRANSLATION	protein_coding	-	CCDS18591.1	1	591	29	14.25	17.5	622.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000028757	Ddost	ENSMUST00000030538	ENSMUSP00000030538	TRANSLATION	protein_coding	-	CCDS18824.1	1	441	0	0	2.7	506.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000015243	Abca1	ENSMUST00000149127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015243	Abca1	ENSMUST00000030010	ENSMUSP00000030010	TRANSLATION	protein_coding	-	CCDS18187.1	1	2261	27	8.295	5.1	392.7	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000063929	Cyp4a32	ENSMUST00000084342	ENSMUSP00000081369	TRANSLATION	protein_coding	-	CCDS38844.1	5	509	30	10	0.5	439.4	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000063929	Cyp4a32	ENSMUST00000129918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008575	Nfib	ENSMUST00000135024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008575	Nfib	ENSMUST00000107245	ENSMUSP00000102865	TRANSLATION	protein_coding	-	-	1	493	0	0	6.3	515.8	0	-4,-5	-	-	6.496	MINOR
ENSMUSG00000008575	Nfib	ENSMUST00000140874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008575	Nfib	ENSMUST00000050872	ENSMUSP00000052863	TRANSLATION	protein_coding	-	CCDS51213.1	1	570	0	0	12.8	532.8	0	-4,-5	-	-	9.372	PRINCIPAL:2
ENSMUSG00000008575	Nfib	ENSMUST00000152588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008575	Nfib	ENSMUST00000148982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008575	Nfib	ENSMUST00000107247	ENSMUSP00000102868	TRANSLATION	protein_coding	-	-	5	560	0	0	15	507.8	0	-4,-5	-	-	8.5	ALTERNATIVE:1
ENSMUSG00000008575	Nfib	ENSMUST00000107248	ENSMUSP00000102869	TRANSLATION	protein_coding	-	-	1	569	0	0	12.8	532.8	0	-4,-5	-	-	9.372	ALTERNATIVE:1
ENSMUSG00000008575	Nfib	ENSMUST00000064770	ENSMUSP00000067629	TRANSLATION	protein_coding	-	CCDS38790.1	1	420	0	0	7.6	417.5	0	-4,-5	-	-	1.884	MINOR
ENSMUSG00000008575	Nfib	ENSMUST00000122918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008575	Nfib	ENSMUST00000155821	ENSMUSP00000123169	TRANSLATION	protein_coding	stop	-	3	174	0	0	0	124.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008575	Nfib	ENSMUST00000107246	ENSMUSP00000102866	TRANSLATION	protein_coding	-	-	1	486	0	0	10.5	420.7	0	-4,-5	-	-	2.716	MINOR
ENSMUSG00000028719	Cmpk1	ENSMUST00000129317	ENSMUSP00000115414	TRANSLATION	nonsense_mediated_decay	start	-	2	42	7	1.132	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000028719	Cmpk1	ENSMUST00000131014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028719	Cmpk1	ENSMUST00000030491	ENSMUSP00000030491	TRANSLATION	protein_coding	-	CCDS18484.1	1	227	8	5.25	7.5	151.6	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000028719	Cmpk1	ENSMUST00000133066	ENSMUSP00000118198	TRANSLATION	nonsense_mediated_decay	-	-	3	62	7	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000093962	Gm11756	ENSMUST00000107312	ENSMUSP00000102933	TRANSLATION	protein_coding	-	-	5	228	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000093962	Gm11756	ENSMUST00000107310	ENSMUSP00000102931	TRANSLATION	protein_coding	-	-	5	356	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:5
ENSMUSG00000028703	Lrrc41	ENSMUST00000134983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028703	Lrrc41	ENSMUST00000152577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028703	Lrrc41	ENSMUST00000030471	ENSMUSP00000030471	TRANSLATION	protein_coding	-	CCDS84786.1	1	807	0	2.3	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028703	Lrrc41	ENSMUST00000154274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028703	Lrrc41	ENSMUST00000138952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028703	Lrrc41	ENSMUST00000133799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039813	Tbc1d2	ENSMUST00000084621	ENSMUSP00000081670	TRANSLATION	protein_coding	-	CCDS18155.1	1	922	10	4.82	1.5	219.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039813	Tbc1d2	ENSMUST00000107750	ENSMUSP00000103379	TRANSLATION	protein_coding	-	-	1	242	10	2	0	44.5	0	-4,-5	-	-	6.36	MINOR
ENSMUSG00000028882	Ppp1r8	ENSMUST00000131725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028882	Ppp1r8	ENSMUST00000030702	ENSMUSP00000030702	TRANSLATION	protein_coding	-	CCDS18736.1	1	351	0	4.4	8.8	59.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000028882	Ppp1r8	ENSMUST00000105919	ENSMUSP00000101539	TRANSLATION	protein_coding	-	CCDS71482.1	3	350	0	4.4	8.8	59.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000028882	Ppp1r8	ENSMUST00000148228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028882	Ppp1r8	ENSMUST00000156777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000129937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000135675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000123617	ENSMUSP00000121415	TRANSLATION	protein_coding	stop	-	5	129	0	1.316	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040690	Col16a1	ENSMUST00000097867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000106001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000146606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000151541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040690	Col16a1	ENSMUST00000143432	ENSMUSP00000120384	TRANSLATION	nonsense_mediated_decay	-	-	1	1046	0	18.5086	0	166.9	0	3,-1	-	-	-1	MINOR
ENSMUSG00000040690	Col16a1	ENSMUST00000044565	ENSMUSP00000035802	TRANSLATION	protein_coding	-	CCDS38889.1	1	1580	0	26.9586	0.5	258.3	0	3,-1	-	-	11.952	PRINCIPAL:1
ENSMUSG00000040690	Col16a1	ENSMUST00000132251	ENSMUSP00000121209	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	0,-6	-	-	-1	MINOR
ENSMUSG00000040690	Col16a1	ENSMUST00000143577	ENSMUSP00000120339	TRANSLATION	protein_coding	start	-	1	1283	0	24.7696	0	259.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040690	Col16a1	ENSMUST00000142293	ENSMUSP00000119219	TRANSLATION	protein_coding	stop	-	2	61	0	0.264	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000040690	Col16a1	ENSMUST00000154441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015247	Nipsnap3b	ENSMUST00000015391	ENSMUSP00000015391	TRANSLATION	protein_coding	-	CCDS18186.1	1	247	0	3.03	5.1	192.8	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000015247	Nipsnap3b	ENSMUST00000132678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015247	Nipsnap3b	ENSMUST00000107665	ENSMUSP00000103292	TRANSLATION	protein_coding	-	CCDS84730.1	2	197	0	2.43	1.7	144.6	0	-4,0	-	-	8.25	MINOR
ENSMUSG00000002384	Bmp8b	ENSMUST00000002457	ENSMUSP00000002457	TRANSLATION	protein_coding	-	CCDS18608.1	1	399	0	3.89	1.5	318.3	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002384	Bmp8b	ENSMUST00000151850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042707	Dnali1	ENSMUST00000036383	ENSMUSP00000047783	TRANSLATION	protein_coding	-	CCDS18635.1	1	258	0	0	2.7	311.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039768	Dnajc11	ENSMUST00000128582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000133959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000148048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000062904	ENSMUSP00000051643	TRANSLATION	protein_coding	-	CCDS18981.2	1	559	0	2.79	17.5	239.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039768	Dnajc11	ENSMUST00000138738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000147625	ENSMUSP00000122140	TRANSLATION	protein_coding	stop	-	3	127	0	1.69	0	41.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039768	Dnajc11	ENSMUST00000139069	ENSMUSP00000119604	TRANSLATION	nonsense_mediated_decay	-	-	1	402	0	2.79	0	78.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039768	Dnajc11	ENSMUST00000149337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000142198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039768	Dnajc11	ENSMUST00000124955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039768	Dnajc11	ENSMUST00000123551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039768	Dnajc11	ENSMUST00000139555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094595	Fsbp	ENSMUST00000180239	ENSMUSP00000137082	TRANSLATION	protein_coding	-	CCDS57263.1	1	299	0	0	7.5	73.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000018983	E2f2	ENSMUST00000149750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018983	E2f2	ENSMUST00000061721	ENSMUSP00000050047	TRANSLATION	protein_coding	-	CCDS18801.1	1	443	0	3.2	0.5	205	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029451	Gm13103	ENSMUST00000105768	ENSMUSP00000101394	TRANSLATION	protein_coding	-	-	2	173	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029451	Gm13103	ENSMUST00000094522	ENSMUSP00000092099	TRANSLATION	protein_coding	-	CCDS38949.1	1	491	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000029451	Gm13103	ENSMUST00000139747	ENSMUSP00000123640	TRANSLATION	protein_coding	stop	-	3	134	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057722	Lepr	ENSMUST00000151733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057722	Lepr	ENSMUST00000106921	ENSMUSP00000102534	TRANSLATION	protein_coding	-	CCDS51239.1	1	894	0	7.49	0.5	72.1	3	-1,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000057722	Lepr	ENSMUST00000037552	ENSMUSP00000037385	TRANSLATION	protein_coding	-	CCDS51240.1	1	1162	0	7.49	1.5	72.1	3	-1,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000057722	Lepr	ENSMUST00000156402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057722	Lepr	ENSMUST00000128948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057722	Lepr	ENSMUST00000102777	ENSMUSP00000099838	TRANSLATION	protein_coding	-	CCDS18397.1	1	892	0	7.49	0.5	72.1	3	-1,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000057722	Lepr	ENSMUST00000145024	ENSMUSP00000123654	TRANSLATION	protein_coding	stop	-	5	30	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000078577	Tmco2	ENSMUST00000106268	ENSMUSP00000101875	TRANSLATION	protein_coding	-	CCDS38866.1	1	187	3	0	1.5	312	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000028461	Ccdc107	ENSMUST00000107922	ENSMUSP00000103555	TRANSLATION	protein_coding	-	-	2	267	0	0	0.5	0	0	3,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000028461	Ccdc107	ENSMUST00000143073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028461	Ccdc107	ENSMUST00000030181	ENSMUSP00000030181	TRANSLATION	protein_coding	-	CCDS18097.1	1	242	0	0	1.5	0	0	3,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000028461	Ccdc107	ENSMUST00000137113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028461	Ccdc107	ENSMUST00000140005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028461	Ccdc107	ENSMUST00000127324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100234	Gm13277	ENSMUST00000178480	ENSMUSP00000136624	TRANSLATION	protein_coding	-	CCDS38805.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000086147	Zfp989	ENSMUST00000146688	ENSMUSP00000135720	TRANSLATION	protein_coding	-	-	1	661	60	1.4	0.5	389.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000086147	Zfp989	ENSMUST00000132166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087194	Skint6	ENSMUST00000138966	ENSMUSP00000121870	TRANSLATION	protein_coding	-	CCDS51269.1	1	1240	0	1.8	0.5	50.2	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000087194	Skint6	ENSMUST00000171224	ENSMUSP00000132312	TRANSLATION	protein_coding	-	CCDS51269.1	5	1240	0	1.8	0.5	50.2	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000028842	Ago3	ENSMUST00000123233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028842	Ago3	ENSMUST00000132123	ENSMUSP00000116204	TRANSLATION	protein_coding	start	-	3	161	3	3.75	0	193.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028842	Ago3	ENSMUST00000127831	ENSMUSP00000118577	TRANSLATION	protein_coding	start/stop	-	5	144	3	2.5	0	127.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028842	Ago3	ENSMUST00000151179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028842	Ago3	ENSMUST00000069097	ENSMUSP00000066633	TRANSLATION	protein_coding	-	CCDS18652.1	1	860	15	18.6	17.5	799.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000028842	Ago3	ENSMUST00000155645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078675	Mup16	ENSMUST00000095051	ENSMUSP00000092661	TRANSLATION	protein_coding	-	CCDS57278.1	1	180	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078675	Mup16	ENSMUST00000107483	ENSMUSP00000103107	TRANSLATION	protein_coding	-	CCDS57278.1	1	180	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028792	Ak2	ENSMUST00000141982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028792	Ak2	ENSMUST00000030583	ENSMUSP00000030583	TRANSLATION	protein_coding	-	CCDS18680.1	1	239	12	5.83	7.5	266.7	0	-4,-5	-	-	19.167	PRINCIPAL:4
ENSMUSG00000028792	Ak2	ENSMUST00000152762	ENSMUSP00000122284	TRANSLATION	nonsense_mediated_decay	start	-	3	72	14	1.75	0	80.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028792	Ak2	ENSMUST00000102604	ENSMUSP00000099664	TRANSLATION	protein_coding	-	CCDS18679.1	1	232	12	5.5	8.8	266.7	0	-4,-5	-	-	19.008	ALTERNATIVE:1
ENSMUSG00000028813	CK137956	ENSMUST00000030614	ENSMUSP00000030614	TRANSLATION	protein_coding	-	CCDS51304.1	1	596	0	0	1.5	812.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028386	Slc46a2	ENSMUST00000030081	ENSMUSP00000030081	TRANSLATION	protein_coding	-	CCDS18227.1	1	479	0	0	1.5	56.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000025743	Sdc3	ENSMUST00000152591	ENSMUSP00000118685	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025743	Sdc3	ENSMUST00000070478	ENSMUSP00000065877	TRANSLATION	protein_coding	-	CCDS38894.1	1	442	0	0	1.5	93	0	-1,1	-	-	6	PRINCIPAL:1
ENSMUSG00000025743	Sdc3	ENSMUST00000146093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025743	Sdc3	ENSMUST00000140623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025743	Sdc3	ENSMUST00000141297	ENSMUSP00000123608	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028583	Pdpn	ENSMUST00000030317	ENSMUSP00000030317	TRANSLATION	protein_coding	-	CCDS38943.1	1	172	0	0	0.5	217.4	1	4,-1	-	-	6	MINOR
ENSMUSG00000028583	Pdpn	ENSMUST00000119654	ENSMUSP00000113776	TRANSLATION	protein_coding	-	CCDS71511.1	3	159	0	0	0.5	202.3	1	4,-1	-	-	5.094	PRINCIPAL:1
ENSMUSG00000047518	Slfnl1	ENSMUST00000062990	ENSMUSP00000050896	TRANSLATION	protein_coding	-	CCDS18590.1	1	410	0	0	0.5	95.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032897	Nfyc	ENSMUST00000145029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032897	Nfyc	ENSMUST00000145658	ENSMUSP00000114591	TRANSLATION	protein_coding	stop	-	3	53	0	0.35	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032897	Nfyc	ENSMUST00000134979	ENSMUSP00000114640	TRANSLATION	protein_coding	stop	-	5	163	0	1.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032897	Nfyc	ENSMUST00000043429	ENSMUSP00000047441	TRANSLATION	protein_coding	-	CCDS18594.1	1	335	0	3.35	17	75.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032897	Nfyc	ENSMUST00000136236	ENSMUSP00000117646	TRANSLATION	protein_coding	stop	-	5	98	0	2.35	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032897	Nfyc	ENSMUST00000118902	ENSMUSP00000112610	TRANSLATION	protein_coding	-	CCDS18594.1	1	335	0	3.35	17	75.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032897	Nfyc	ENSMUST00000148081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032897	Nfyc	ENSMUST00000127030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032897	Nfyc	ENSMUST00000097906	ENSMUSP00000095516	TRANSLATION	protein_coding	-	CCDS18594.1	1	335	0	3.35	17	75.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032897	Nfyc	ENSMUST00000120779	ENSMUSP00000112810	TRANSLATION	protein_coding	-	CCDS18594.1	5	335	0	3.35	17	75.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006216	Clcnkb	ENSMUST00000135486	ENSMUSP00000119059	TRANSLATION	protein_coding	start	-	2	73	0	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006216	Clcnkb	ENSMUST00000105788	ENSMUSP00000101414	TRANSLATION	protein_coding	-	-	1	676	0	15.2	0	280.5	10	-4,-5	-	-	10.998	MINOR
ENSMUSG00000006216	Clcnkb	ENSMUST00000145725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006216	Clcnkb	ENSMUST00000006378	ENSMUSP00000006378	TRANSLATION	protein_coding	-	CCDS18872.1	1	687	0	15.7	5.1	280.5	10	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040761	Spen	ENSMUST00000078886	ENSMUSP00000077925	TRANSLATION	protein_coding	-	CCDS84815.1	5	3620	0	10	0.5	277.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040761	Spen	ENSMUST00000105786	ENSMUSP00000101412	TRANSLATION	protein_coding	-	CCDS38940.1	5	3643	0	10	0.5	277.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000040761	Spen	ENSMUST00000147227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040761	Spen	ENSMUST00000152081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040761	Spen	ENSMUST00000152411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040761	Spen	ENSMUST00000144500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029061	Mmp23	ENSMUST00000139242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029061	Mmp23	ENSMUST00000156906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029061	Mmp23	ENSMUST00000030937	ENSMUSP00000030937	TRANSLATION	protein_coding	-	CCDS19034.1	1	391	18	2.64	1.5	152.1	0	-3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029061	Mmp23	ENSMUST00000130944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028248	Pnisr	ENSMUST00000108229	ENSMUSP00000103864	TRANSLATION	protein_coding	-	-	1	373	0	0	0	144	0	-4,-6	-	-	3.954	MINOR
ENSMUSG00000028248	Pnisr	ENSMUST00000148561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000150927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000133241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000138419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000150368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000156136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000138681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000185001	ENSMUSP00000139324	TRANSLATION	nonsense_mediated_decay	-	-	5	373	0	0	0	144	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028248	Pnisr	ENSMUST00000098238	ENSMUSP00000095840	TRANSLATION	protein_coding	-	-	5	805	0	0	2.4	178.1	0	-4,-6	-	-	6.528	MINOR
ENSMUSG00000028248	Pnisr	ENSMUST00000152666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000151621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028248	Pnisr	ENSMUST00000029911	ENSMUSP00000029911	TRANSLATION	protein_coding	-	CCDS51129.1	1	814	0	0	6.3	178.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000029066	Mrpl20	ENSMUST00000185148	ENSMUSP00000139169	TRANSLATION	protein_coding	-	-	3	112	0	2.5	0	66.7	0	-4,0	-	-	6.432	MINOR
ENSMUSG00000029066	Mrpl20	ENSMUST00000130188	ENSMUSP00000139007	TRANSLATION	protein_coding	-	-	3	96	0	2.5	0	85.8	0	-4,0	-	-	7.578	MINOR
ENSMUSG00000029066	Mrpl20	ENSMUST00000184339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029066	Mrpl20	ENSMUST00000030942	ENSMUSP00000030942	TRANSLATION	protein_coding	-	CCDS19041.1	1	149	0	3.5	21.5	126.2	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000029066	Mrpl20	ENSMUST00000143503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029066	Mrpl20	ENSMUST00000137487	ENSMUSP00000139122	TRANSLATION	nonsense_mediated_decay	-	-	1	149	0	3.5	21.5	126.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000078490	Cfap74	ENSMUST00000238620	ENSMUSP00000158655	TRANSLATION	protein_coding	-	-	-	1605	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000078490	Cfap74	ENSMUST00000238423	ENSMUSP00000158718	TRANSLATION	protein_coding	-	-	-	1623	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000078490	Cfap74	ENSMUST00000144625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078490	Cfap74	ENSMUST00000123952	ENSMUSP00000131899	TRANSLATION	protein_coding	-	CCDS51402.1	1	129	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000078490	Cfap74	ENSMUST00000094408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078490	Cfap74	ENSMUST00000144157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078490	Cfap74	ENSMUST00000165947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078490	Cfap74	ENSMUST00000151083	ENSMUSP00000123626	TRANSLATION	protein_coding	-	-	5	1578	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000078490	Cfap74	ENSMUST00000105619	ENSMUSP00000101244	TRANSLATION	protein_coding	-	-	2	248	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000078490	Cfap74	ENSMUST00000135407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078490	Cfap74	ENSMUST00000129481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078490	Cfap74	ENSMUST00000050128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037600	Kdf1	ENSMUST00000153811	ENSMUSP00000122170	TRANSLATION	protein_coding	stop	-	2	172	0	0	0	181	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037600	Kdf1	ENSMUST00000105901	ENSMUSP00000101521	TRANSLATION	protein_coding	-	CCDS38905.1	1	397	0	0	2.7	592.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037600	Kdf1	ENSMUST00000149807	ENSMUSP00000119014	TRANSLATION	protein_coding	stop	-	2	265	0	0	0	338.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037600	Kdf1	ENSMUST00000121797	ENSMUSP00000113590	TRANSLATION	protein_coding	-	-	2	375	0	0	0	537.5	0	-4,-6	-	-	2.682	MINOR
ENSMUSG00000037600	Kdf1	ENSMUST00000042919	ENSMUSP00000048768	TRANSLATION	protein_coding	-	CCDS38905.1	1	397	0	0	2.7	592.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034359	Skint2	ENSMUST00000106560	ENSMUSP00000102170	TRANSLATION	protein_coding	-	-	1	315	0	1.95	0.5	87.8	3	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034359	Skint2	ENSMUST00000106559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034359	Skint2	ENSMUST00000058791	ENSMUSP00000061011	TRANSLATION	protein_coding	-	-	1	237	0	1.95	0.5	87.8	0	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034359	Skint2	ENSMUST00000186969	ENSMUSP00000139831	TRANSLATION	protein_coding	-	CCDS38840.2	1	400	0	1.95	0.5	87.8	4	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000028753	Vwa5b1	ENSMUST00000105812	ENSMUSP00000101438	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	0	0	105.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028753	Vwa5b1	ENSMUST00000137206	ENSMUSP00000122484	TRANSLATION	protein_coding	start/stop	-	3	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028753	Vwa5b1	ENSMUST00000030533	ENSMUSP00000030533	TRANSLATION	protein_coding	-	CCDS51336.1	1	1215	5	0	1.5	211.1	0	-3,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000028753	Vwa5b1	ENSMUST00000133319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028753	Vwa5b1	ENSMUST00000154312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087166	L1td1	ENSMUST00000154279	ENSMUSP00000127504	TRANSLATION	protein_coding	-	CCDS51235.1	1	782	0	1.4	0.5	76	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000087166	L1td1	ENSMUST00000173659	ENSMUSP00000134149	TRANSLATION	protein_coding	-	-	2	848	0	1.4	0	76	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000087166	L1td1	ENSMUST00000152889	ENSMUSP00000131563	TRANSLATION	protein_coding	stop	-	2	147	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000087166	L1td1	ENSMUST00000171708	ENSMUSP00000132806	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073876	Gm13305	ENSMUST00000129970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073876	Gm13305	ENSMUST00000133764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073876	Gm13305	ENSMUST00000148376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073876	Gm13305	ENSMUST00000154884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073876	Gm13305	ENSMUST00000152686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073876	Gm13305	ENSMUST00000098121	ENSMUSP00000095725	TRANSLATION	protein_coding	-	CCDS51150.1	1	432	0	4.363	1.5	0	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000110067	6330411D24Rik	ENSMUST00000211105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110067	6330411D24Rik	ENSMUST00000238915	ENSMUSP00000158956	TRANSLATION	protein_coding	stop	-	-	83	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000039492	Ccdc27	ENSMUST00000047207	ENSMUSP00000039642	TRANSLATION	protein_coding	-	CCDS19008.1	1	639	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036002	Fam214b	ENSMUST00000152846	ENSMUSP00000118228	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036002	Fam214b	ENSMUST00000107957	ENSMUSP00000103591	TRANSLATION	protein_coding	-	CCDS18090.1	5	538	0	0	5.1	115	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036002	Fam214b	ENSMUST00000124155	ENSMUSP00000115835	TRANSLATION	protein_coding	stop	-	2	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036002	Fam214b	ENSMUST00000135067	ENSMUSP00000122882	TRANSLATION	nonsense_mediated_decay	-	-	1	332	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036002	Fam214b	ENSMUST00000036462	ENSMUSP00000038177	TRANSLATION	protein_coding	-	CCDS18090.1	1	538	0	0	5.1	115	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036002	Fam214b	ENSMUST00000140998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036002	Fam214b	ENSMUST00000107959	ENSMUSP00000103593	TRANSLATION	protein_coding	-	CCDS18090.1	1	538	0	0	5.1	115	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036002	Fam214b	ENSMUST00000144999	ENSMUSP00000119404	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036002	Fam214b	ENSMUST00000107958	ENSMUSP00000103592	TRANSLATION	protein_coding	-	CCDS18090.1	1	538	0	0	5.1	115	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036002	Fam214b	ENSMUST00000107956	ENSMUSP00000103590	TRANSLATION	protein_coding	-	CCDS18090.1	5	538	0	0	5.1	115	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047719	Ubiad1	ENSMUST00000156686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047719	Ubiad1	ENSMUST00000051633	ENSMUSP00000058502	TRANSLATION	protein_coding	-	CCDS18936.1	1	336	0	0	3.9	140.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000028961	Pgd	ENSMUST00000156120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028961	Pgd	ENSMUST00000084124	ENSMUSP00000081141	TRANSLATION	protein_coding	-	CCDS38974.1	1	483	19	11.25	14.5	606.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028961	Pgd	ENSMUST00000124409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028961	Pgd	ENSMUST00000137982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028961	Pgd	ENSMUST00000143944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028678	Kif2c	ENSMUST00000141675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028678	Kif2c	ENSMUST00000142138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028678	Kif2c	ENSMUST00000132868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028678	Kif2c	ENSMUST00000148918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028678	Kif2c	ENSMUST00000065896	ENSMUSP00000064261	TRANSLATION	protein_coding	-	CCDS18531.1	1	721	11	11	1.5	311	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000028678	Kif2c	ENSMUST00000153953	ENSMUSP00000122655	TRANSLATION	protein_coding	stop	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028678	Kif2c	ENSMUST00000142205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028678	Kif2c	ENSMUST00000106436	ENSMUSP00000102044	TRANSLATION	protein_coding	-	CCDS71452.1	5	670	11	11	1.5	311	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000096596	Gm10591	ENSMUST00000178168	ENSMUSP00000136903	TRANSLATION	protein_coding	-	CCDS51158.1	1	133	0	2.33	3.9	83.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000073724	Pramel4	ENSMUST00000133626	ENSMUSP00000119857	TRANSLATION	protein_coding	stop	-	5	158	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073724	Pramel4	ENSMUST00000156324	ENSMUSP00000125675	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073724	Pramel4	ENSMUST00000084191	ENSMUSP00000081207	TRANSLATION	protein_coding	-	-	1	503	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000073724	Pramel4	ENSMUST00000094520	ENSMUSP00000092097	TRANSLATION	protein_coding	-	CCDS18900.1	2	500	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000073724	Pramel4	ENSMUST00000091676	ENSMUSP00000089265	TRANSLATION	protein_coding	-	CCDS18900.1	1	500	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000028339	Col15a1	ENSMUST00000140094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028339	Col15a1	ENSMUST00000107731	ENSMUSP00000103359	TRANSLATION	protein_coding	-	-	1	533	0	10.715	0	370.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028339	Col15a1	ENSMUST00000102917	ENSMUSP00000099981	TRANSLATION	protein_coding	-	CCDS18159.1	1	1367	0	16.285	0.5	473	0	1,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000028339	Col15a1	ENSMUST00000082303	ENSMUSP00000080921	TRANSLATION	protein_coding	-	-	2	1345	0	15.835	0	472.5	0	1,-4	-	-	11.07	ALTERNATIVE:2
ENSMUSG00000028339	Col15a1	ENSMUST00000140413	ENSMUSP00000119292	TRANSLATION	protein_coding	stop	-	5	121	0	2.689	0	36.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028339	Col15a1	ENSMUST00000107730	ENSMUSP00000103358	TRANSLATION	protein_coding	-	-	1	278	0	5.95	0	344.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028339	Col15a1	ENSMUST00000148103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028339	Col15a1	ENSMUST00000146967	ENSMUSP00000118637	TRANSLATION	protein_coding	stop	-	5	145	0	3.767	0	36.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028339	Col15a1	ENSMUST00000124105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029054	Gabrd	ENSMUST00000150423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029054	Gabrd	ENSMUST00000129892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029054	Gabrd	ENSMUST00000030925	ENSMUSP00000030925	TRANSLATION	protein_coding	-	CCDS19028.1	1	449	0	5.9	2.8	268.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044813	Shb	ENSMUST00000061986	ENSMUSP00000060433	TRANSLATION	protein_coding	-	CCDS51173.1	1	503	0	1.6	1.5	61.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044813	Shb	ENSMUST00000147448	ENSMUSP00000115331	TRANSLATION	protein_coding	stop	-	2	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044813	Shb	ENSMUST00000130107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044813	Shb	ENSMUST00000125599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044813	Shb	ENSMUST00000146236	ENSMUSP00000123176	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044813	Shb	ENSMUST00000147926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029053	Prkcz	ENSMUST00000140256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029053	Prkcz	ENSMUST00000105624	ENSMUSP00000101249	TRANSLATION	protein_coding	-	-	1	96	0	2.75	0	59.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029053	Prkcz	ENSMUST00000125320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029053	Prkcz	ENSMUST00000131975	ENSMUSP00000116042	TRANSLATION	protein_coding	stop	-	3	121	8	1.6	0	56.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029053	Prkcz	ENSMUST00000139647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029053	Prkcz	ENSMUST00000103178	ENSMUSP00000099467	TRANSLATION	protein_coding	-	CCDS19027.1	1	409	16	9.15	8.3	244.1	0	-4,-5	-	-	3.666	MINOR
ENSMUSG00000029053	Prkcz	ENSMUST00000135699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029053	Prkcz	ENSMUST00000123652	ENSMUSP00000121675	TRANSLATION	protein_coding	stop	-	2	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029053	Prkcz	ENSMUST00000030922	ENSMUSP00000030922	TRANSLATION	protein_coding	-	CCDS19026.1	1	592	24	13.5	7.5	359.4	0	-4,-5	-	-	20.67	PRINCIPAL:1
ENSMUSG00000029053	Prkcz	ENSMUST00000145373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066191	Anks6	ENSMUST00000152479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066191	Anks6	ENSMUST00000107747	ENSMUSP00000103376	TRANSLATION	nonsense_mediated_decay	-	-	1	815	0	4.09	1	157.9	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000066191	Anks6	ENSMUST00000084616	ENSMUSP00000081665	TRANSLATION	protein_coding	-	CCDS18157.1	5	815	0	5.09	0.5	194.8	0	-3,-4	-	-	11.676	PRINCIPAL:2
ENSMUSG00000066191	Anks6	ENSMUST00000229609	ENSMUSP00000155271	TRANSLATION	protein_coding	-	-	-	883	0	5.09	1.5	200.2	0	-3,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000066191	Anks6	ENSMUST00000154664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078735	Il11ra2	ENSMUST00000108006	ENSMUSP00000103641	TRANSLATION	protein_coding	-	CCDS38735.1	1	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078735	Il11ra2	ENSMUST00000238770	ENSMUSP00000158819	TRANSLATION	protein_coding	-	CCDS38735.1	-	432	0	4.363	1.5	0	1	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000014030	Pax5	ENSMUST00000174761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014030	Pax5	ENSMUST00000186542	ENSMUSP00000141186	TRANSLATION	protein_coding	stop	-	5	108	0	1.26	0	108.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000107825	ENSMUSP00000103455	TRANSLATION	protein_coding	-	-	5	357	0	3.25	5.2	328.2	0	-4,-5	-	-	7.914	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000143235	ENSMUSP00000134370	TRANSLATION	nonsense_mediated_decay	-	-	5	288	0	3.25	0	247.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000173821	ENSMUSP00000134712	TRANSLATION	protein_coding	-	-	5	328	0	3.25	1.2	247.7	0	-4,-5	-	-	6.064	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000174319	ENSMUSP00000133978	TRANSLATION	protein_coding	start	-	5	273	0	1.75	0	124.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000102932	ENSMUSP00000099996	TRANSLATION	protein_coding	-	-	5	362	0	3.25	1.2	327.3	0	-4,-5	-	-	6.592	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000172866	ENSMUSP00000134119	TRANSLATION	protein_coding	start	-	5	336	0	1.75	0	295.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000014174	ENSMUSP00000014174	TRANSLATION	protein_coding	-	CCDS18125.1	1	391	0	3.25	13.6	418.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000014030	Pax5	ENSMUST00000191036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014030	Pax5	ENSMUST00000146335	ENSMUSP00000139296	TRANSLATION	protein_coding	stop	-	5	200	0	2.85	0	247.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000107827	ENSMUSP00000103458	TRANSLATION	protein_coding	-	-	5	355	0	3.25	0	247.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000173733	ENSMUSP00000133671	TRANSLATION	protein_coding	-	-	5	291	0	2.25	3.2	190.4	0	-4,-5	-	-	4.702	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000187197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014030	Pax5	ENSMUST00000174242	ENSMUSP00000134391	TRANSLATION	nonsense_mediated_decay	-	-	5	307	0	3.25	0	247.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000107826	ENSMUSP00000103457	TRANSLATION	protein_coding	-	-	5	326	0	3.25	0	247.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000172949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014030	Pax5	ENSMUST00000194075	ENSMUSP00000141303	TRANSLATION	protein_coding	start	-	5	209	0	0	0	170.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000165417	ENSMUSP00000128880	TRANSLATION	protein_coding	-	-	5	348	0	3.25	3.2	418.5	0	-4,-5	-	-	12.7	MINOR
ENSMUSG00000014030	Pax5	ENSMUST00000134968	ENSMUSP00000133540	TRANSLATION	protein_coding	-	-	5	319	0	3.25	1.2	327.3	0	-4,-5	-	-	6.592	MINOR
ENSMUSG00000056529	Ptafr	ENSMUST00000070690	ENSMUSP00000070925	TRANSLATION	protein_coding	-	CCDS38899.1	1	341	0	0.6	5.2	132.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070890	Gm12794	ENSMUST00000052027	ENSMUSP00000051550	TRANSLATION	protein_coding	-	CCDS51242.1	5	483	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000023075	Akirin1	ENSMUST00000142778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023075	Akirin1	ENSMUST00000102636	ENSMUSP00000099696	TRANSLATION	protein_coding	-	CCDS18619.1	1	191	0	0	5.1	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000023075	Akirin1	ENSMUST00000153472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042202	Slc35e2	ENSMUST00000043829	ENSMUSP00000041449	TRANSLATION	protein_coding	-	CCDS38995.1	1	405	0	0	5.1	302.8	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000042202	Slc35e2	ENSMUST00000151425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042202	Slc35e2	ENSMUST00000118607	ENSMUSP00000113189	TRANSLATION	protein_coding	-	CCDS38995.1	1	405	0	0	5.1	302.8	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000042202	Slc35e2	ENSMUST00000105608	ENSMUSP00000101233	TRANSLATION	protein_coding	-	CCDS38995.1	5	405	0	0	5.1	302.8	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000048772	Tmem53	ENSMUST00000106434	ENSMUSP00000102042	TRANSLATION	protein_coding	-	CCDS71453.1	1	283	0	0	0.5	184.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048772	Tmem53	ENSMUST00000062824	ENSMUSP00000061523	TRANSLATION	protein_coding	-	CCDS18533.1	1	276	0	0	3.9	184.9	0	-4,-5	-	-	7	PRINCIPAL:3
ENSMUSG00000048772	Tmem53	ENSMUST00000125943	ENSMUSP00000121458	TRANSLATION	protein_coding	stop	-	3	252	0	0	0	181.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048772	Tmem53	ENSMUST00000145836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048772	Tmem53	ENSMUST00000106433	ENSMUSP00000102041	TRANSLATION	protein_coding	-	CCDS71454.1	1	261	0	0	0.5	184.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048772	Tmem53	ENSMUST00000154449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073684	Faap20	ENSMUST00000126803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073684	Faap20	ENSMUST00000122957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073684	Faap20	ENSMUST00000097747	ENSMUSP00000095354	TRANSLATION	protein_coding	-	-	1	176	4	0.95	0	211.4	0	-4,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000073684	Faap20	ENSMUST00000149468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073684	Faap20	ENSMUST00000143709	ENSMUSP00000121522	TRANSLATION	protein_coding	start	-	3	160	4	0.95	0	211.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073684	Faap20	ENSMUST00000178473	ENSMUSP00000137116	TRANSLATION	protein_coding	-	CCDS57317.1	1	186	4	0.95	1.5	211.4	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000073684	Faap20	ENSMUST00000148406	ENSMUSP00000117360	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073684	Faap20	ENSMUST00000156404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073684	Faap20	ENSMUST00000126713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073684	Faap20	ENSMUST00000105627	ENSMUSP00000101252	TRANSLATION	protein_coding	-	CCDS84835.1	2	173	4	0.95	0.5	211.4	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000046671	Mtfr1l	ENSMUST00000130187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046671	Mtfr1l	ENSMUST00000131613	ENSMUSP00000123326	TRANSLATION	nonsense_mediated_decay	-	-	5	202	0	0	2.4	189	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046671	Mtfr1l	ENSMUST00000129836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046671	Mtfr1l	ENSMUST00000154769	ENSMUSP00000117943	TRANSLATION	protein_coding	stop	-	5	237	0	0	0	203.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046671	Mtfr1l	ENSMUST00000102550	ENSMUSP00000099609	TRANSLATION	protein_coding	-	CCDS18775.1	1	289	0	0	8.8	230.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000046671	Mtfr1l	ENSMUST00000116279	ENSMUSP00000111983	TRANSLATION	protein_coding	-	CCDS18775.1	1	289	0	0	8.8	230.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000046671	Mtfr1l	ENSMUST00000146808	ENSMUSP00000120200	TRANSLATION	protein_coding	stop	-	2	225	0	0	0	198.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000142684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059810	Rgs3	ENSMUST00000126338	ENSMUSP00000116041	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000098031	ENSMUSP00000095639	TRANSLATION	protein_coding	-	-	5	602	0	7.3	6.3	81.9	0	-4,0	-	-	9.771	PRINCIPAL:1
ENSMUSG00000059810	Rgs3	ENSMUST00000138674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059810	Rgs3	ENSMUST00000124082	ENSMUSP00000115192	TRANSLATION	protein_coding	stop	-	2	261	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000084521	ENSMUSP00000081569	TRANSLATION	protein_coding	-	CCDS51202.1	5	966	0	6	0.5	157.5	0	-4,-2	-	-	9.3	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000146083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059810	Rgs3	ENSMUST00000154071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059810	Rgs3	ENSMUST00000143042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059810	Rgs3	ENSMUST00000065870	ENSMUSP00000065447	TRANSLATION	protein_coding	-	CCDS18246.1	1	610	0	7.35	2.7	81.9	0	-4,-5	-	-	8.238	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000127254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059810	Rgs3	ENSMUST00000107424	ENSMUSP00000103047	TRANSLATION	protein_coding	-	CCDS38776.1	1	433	0	2.45	7.6	30.3	0	-4,-2	-	-	3	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000153875	ENSMUSP00000123310	TRANSLATION	protein_coding	start	-	2	126	0	2.132	0	125.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000144489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059810	Rgs3	ENSMUST00000107420	ENSMUSP00000103043	TRANSLATION	protein_coding	-	CCDS80110.1	1	568	0	3.55	0.5	127.2	0	-4,-5	-	-	4.182	MINOR
ENSMUSG00000059810	Rgs3	ENSMUST00000142565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059810	Rgs3	ENSMUST00000125369	ENSMUSP00000159172	TRANSLATION	protein_coding	-	-	1	192	0	3.55	2.7	127.2	0	-4,-2	-	-	4.956	MINOR
ENSMUSG00000029026	Trp73	ENSMUST00000239448	ENSMUSP00000159346	TRANSLATION	protein_coding	-	CCDS19009.2	-	638	4	6.5	0.5	472.3	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000029026	Trp73	ENSMUST00000133533	ENSMUSP00000114418	TRANSLATION	protein_coding	-	CCDS51397.1	1	590	4	6.5	0.5	472.3	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000029026	Trp73	ENSMUST00000105644	ENSMUSP00000101269	TRANSLATION	protein_coding	-	-	1	631	4	6.5	0	472.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000029026	Trp73	ENSMUST00000097762	ENSMUSP00000095368	TRANSLATION	protein_coding	-	CCDS51396.1	1	494	4	6.5	0.5	465.9	0	-4,-7	-	-	15.616	ALTERNATIVE:2
ENSMUSG00000029026	Trp73	ENSMUST00000097763	ENSMUSP00000134196	TRANSLATION	nonsense_mediated_decay	-	-	5	367	4	6.5	0	438.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029026	Trp73	ENSMUST00000105643	ENSMUSP00000101268	TRANSLATION	protein_coding	-	-	5	452	4	6.5	1.2	438.8	0	-4,-7	-	-	13.99	MINOR
ENSMUSG00000029026	Trp73	ENSMUST00000155642	ENSMUSP00000135281	TRANSLATION	protein_coding	stop	-	3	213	4	4.75	0	317.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029026	Trp73	ENSMUST00000139634	ENSMUSP00000114736	TRANSLATION	protein_coding	stop	-	3	204	0	1.75	0	82.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078612	Fyb2	ENSMUST00000106803	ENSMUSP00000102415	TRANSLATION	protein_coding	-	CCDS51250.1	1	793	0	1.13	0.5	51.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000078612	Fyb2	ENSMUST00000106804	ENSMUSP00000102416	TRANSLATION	protein_coding	-	-	1	729	0	1.13	0	51.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038368	Focad	ENSMUST00000162039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038368	Focad	ENSMUST00000159342	ENSMUSP00000124298	TRANSLATION	protein_coding	-	-	1	1712	0	0	0.5	1192.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038368	Focad	ENSMUST00000129967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038368	Focad	ENSMUST00000097992	ENSMUSP00000095602	TRANSLATION	protein_coding	-	CCDS38798.1	5	1798	0	0	1.5	1192.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038368	Focad	ENSMUST00000130603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038368	Focad	ENSMUST00000107147	ENSMUSP00000102765	TRANSLATION	protein_coding	-	-	1	204	0	0	0	305.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038368	Focad	ENSMUST00000107148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038368	Focad	ENSMUST00000147527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038368	Focad	ENSMUST00000144388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038368	Focad	ENSMUST00000161058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041235	Chd7	ENSMUST00000129655	ENSMUSP00000123241	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041235	Chd7	ENSMUST00000130709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041235	Chd7	ENSMUST00000222546	ENSMUSP00000152166	TRANSLATION	protein_coding	start/stop	-	3	194	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041235	Chd7	ENSMUST00000039267	ENSMUSP00000043903	TRANSLATION	protein_coding	-	CCDS38689.1	5	2986	3	14.67	0.5	495.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041235	Chd7	ENSMUST00000170391	ENSMUSP00000127007	TRANSLATION	protein_coding	-	-	5	941	0	2	0	67.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041235	Chd7	ENSMUST00000051558	ENSMUSP00000059079	TRANSLATION	protein_coding	-	CCDS38689.1	5	2986	3	14.67	0.5	495.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041235	Chd7	ENSMUST00000127476	ENSMUSP00000118711	TRANSLATION	protein_coding	stop	-	1	631	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041235	Chd7	ENSMUST00000170457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041120	Nbl1	ENSMUST00000132900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041120	Nbl1	ENSMUST00000042844	ENSMUSP00000045608	TRANSLATION	protein_coding	-	CCDS18839.1	1	178	0	3	6.3	82.3	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000041120	Nbl1	ENSMUST00000132940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028282	Casp8ap2	ENSMUST00000108178	ENSMUSP00000103813	TRANSLATION	protein_coding	-	-	5	190	0	1.7	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028282	Casp8ap2	ENSMUST00000178925	ENSMUSP00000136016	TRANSLATION	protein_coding	-	CCDS18016.1	5	1962	0	1.7	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000028282	Casp8ap2	ENSMUST00000124278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028282	Casp8ap2	ENSMUST00000127619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028282	Casp8ap2	ENSMUST00000029950	ENSMUSP00000029950	TRANSLATION	protein_coding	-	CCDS18016.1	1	1962	0	1.7	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000028369	Svep1	ENSMUST00000042850	ENSMUSP00000045856	TRANSLATION	protein_coding	-	CCDS18209.1	1	3567	28	17.64	0.5	1993.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028369	Svep1	ENSMUST00000146329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028369	Svep1	ENSMUST00000128783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028369	Svep1	ENSMUST00000149152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047875	Gpr157	ENSMUST00000094451	ENSMUSP00000092020	TRANSLATION	protein_coding	-	CCDS38977.1	1	330	0	0	1.5	47.4	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000028964	Park7	ENSMUST00000105674	ENSMUSP00000101299	TRANSLATION	protein_coding	-	CCDS18975.1	5	189	0	5.75	21.5	179.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028964	Park7	ENSMUST00000030805	ENSMUSP00000030805	TRANSLATION	protein_coding	-	CCDS18975.1	1	189	0	5.75	21.5	179.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028964	Park7	ENSMUST00000132265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028964	Park7	ENSMUST00000148626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028964	Park7	ENSMUST00000134751	ENSMUSP00000122265	TRANSLATION	protein_coding	stop	-	2	125	0	3.23	0	84.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028964	Park7	ENSMUST00000128075	ENSMUSP00000115875	TRANSLATION	protein_coding	stop	-	5	135	0	4.25	0	142	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028964	Park7	ENSMUST00000105675	ENSMUSP00000101300	TRANSLATION	protein_coding	-	CCDS18975.1	5	189	0	5.75	21.5	179.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028964	Park7	ENSMUST00000105676	ENSMUSP00000101301	TRANSLATION	protein_coding	-	-	5	175	0	5.25	0	177.9	0	-4,-5	-	-	10.92	MINOR
ENSMUSG00000028964	Park7	ENSMUST00000146184	ENSMUSP00000120832	TRANSLATION	protein_coding	stop	-	5	84	0	2.75	0	82.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028964	Park7	ENSMUST00000105673	ENSMUSP00000101298	TRANSLATION	protein_coding	-	CCDS18975.1	5	189	0	5.75	21.5	179.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000046861	Hectd3	ENSMUST00000050067	ENSMUSP00000051922	TRANSLATION	protein_coding	-	CCDS18522.1	1	861	3	6.665	7.5	229.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000046861	Hectd3	ENSMUST00000133234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046861	Hectd3	ENSMUST00000155267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028252	Ccnc	ENSMUST00000133597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028252	Ccnc	ENSMUST00000102997	ENSMUSP00000100062	TRANSLATION	protein_coding	-	CCDS17998.1	1	283	0	8.33	11.6	77	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028252	Ccnc	ENSMUST00000123294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028252	Ccnc	ENSMUST00000145288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028252	Ccnc	ENSMUST00000108240	ENSMUSP00000103875	TRANSLATION	protein_coding	-	CCDS51127.1	1	282	0	7.83	6.3	77	0	-4,-5	-	-	12.498	MINOR
ENSMUSG00000028252	Ccnc	ENSMUST00000120679	ENSMUSP00000113682	TRANSLATION	protein_coding	-	CCDS71350.1	1	266	0	7.83	0.5	77	0	-4,-5	-	-	10.998	MINOR
ENSMUSG00000028252	Ccnc	ENSMUST00000065928	ENSMUSP00000069076	TRANSLATION	protein_coding	-	CCDS51127.1	1	282	0	7.83	6.3	77	0	-4,-5	-	-	12.498	MINOR
ENSMUSG00000028252	Ccnc	ENSMUST00000133712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028837	Psmb2	ENSMUST00000150372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028837	Psmb2	ENSMUST00000130737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028837	Psmb2	ENSMUST00000030642	ENSMUSP00000030642	TRANSLATION	protein_coding	-	CCDS18657.1	1	201	0	5.25	11.5	140	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028869	Gnl2	ENSMUST00000106176	ENSMUSP00000101782	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	71.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028869	Gnl2	ENSMUST00000125078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028869	Gnl2	ENSMUST00000030684	ENSMUSP00000030684	TRANSLATION	protein_coding	-	CCDS18634.1	1	728	14	2.93	0.5	216.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028869	Gnl2	ENSMUST00000147390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028869	Gnl2	ENSMUST00000147550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028869	Gnl2	ENSMUST00000136910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078689	Mup6	ENSMUST00000107517	ENSMUSP00000103141	TRANSLATION	protein_coding	-	CCDS38773.1	5	179	0	5.08	0.5	114.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078689	Mup6	ENSMUST00000107520	ENSMUSP00000103144	TRANSLATION	protein_coding	-	CCDS38773.1	5	179	0	5.08	0.5	114.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078689	Mup6	ENSMUST00000107521	ENSMUSP00000103145	TRANSLATION	protein_coding	-	-	3	171	0	4.08	0	114.9	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000039653	Baat	ENSMUST00000043056	ENSMUSP00000041983	TRANSLATION	protein_coding	-	CCDS18173.1	1	420	0	2.6	1.5	394.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039653	Baat	ENSMUST00000166036	ENSMUSP00000129603	TRANSLATION	protein_coding	-	CCDS18173.1	3	420	0	2.6	1.5	394.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073802	Cdkn2b	ENSMUST00000097981	ENSMUSP00000095595	TRANSLATION	protein_coding	-	CCDS18351.1	1	130	0	2	3.9	29.4	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000028343	Erp44	ENSMUST00000148947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028343	Erp44	ENSMUST00000132927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028343	Erp44	ENSMUST00000030028	ENSMUSP00000030028	TRANSLATION	protein_coding	-	CCDS18165.1	1	406	0	9.75	9.6	221.4	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028343	Erp44	ENSMUST00000138743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028495	Rps6	ENSMUST00000102814	ENSMUSP00000099878	TRANSLATION	protein_coding	-	CCDS18310.1	1	249	0	4	21.5	232.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028495	Rps6	ENSMUST00000130001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028495	Rps6	ENSMUST00000136174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028495	Rps6	ENSMUST00000123229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028668	Eloa	ENSMUST00000030427	ENSMUSP00000030427	TRANSLATION	protein_coding	-	CCDS18798.1	1	773	0	2.96	1.5	145.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025328	Padi3	ENSMUST00000172098	ENSMUSP00000130721	TRANSLATION	protein_coding	-	-	1	654	20	13.35	0	822.3	0	1,-3	-	-	13.164	MINOR
ENSMUSG00000025328	Padi3	ENSMUST00000026377	ENSMUSP00000026377	TRANSLATION	protein_coding	-	CCDS18855.1	1	664	20	14.35	3.9	869.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000028523	Tctex1d1	ENSMUST00000116317	ENSMUSP00000112019	TRANSLATION	protein_coding	-	CCDS18405.1	5	173	0	1.198	1.5	96	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000028523	Tctex1d1	ENSMUST00000140654	ENSMUSP00000116692	TRANSLATION	protein_coding	-	CCDS51246.1	2	116	0	1.198	1.5	96	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028523	Tctex1d1	ENSMUST00000139883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028523	Tctex1d1	ENSMUST00000223169	ENSMUSP00000152761	TRANSLATION	protein_coding	-	-	5	177	0	1.198	1.5	96	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028523	Tctex1d1	ENSMUST00000169211	ENSMUSP00000128228	TRANSLATION	protein_coding	-	CCDS18405.1	1	173	0	1.198	1.5	96	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000028523	Tctex1d1	ENSMUST00000125417	ENSMUSP00000117319	TRANSLATION	protein_coding	-	CCDS51246.1	5	116	0	1.198	1.5	96	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028523	Tctex1d1	ENSMUST00000030248	ENSMUSP00000030248	TRANSLATION	protein_coding	-	CCDS18405.1	1	173	0	1.198	1.5	96	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000028523	Tctex1d1	ENSMUST00000220547	ENSMUSP00000152803	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071000	Olfr155	ENSMUST00000107860	ENSMUSP00000103492	TRANSLATION	protein_coding	-	CCDS18115.1	5	319	0	0.36	7.5	197.5	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000071000	Olfr155	ENSMUST00000095108	ENSMUSP00000092726	TRANSLATION	protein_coding	-	CCDS18115.1	-	319	0	0.36	7.5	197.5	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000118704	ENSMUSP00000112863	TRANSLATION	protein_coding	-	CCDS51381.1	1	1046	20	23.33	6.5	668.6	0	-4,-5	-	-	19.472	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000124510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039936	Pik3cd	ENSMUST00000105688	ENSMUSP00000101313	TRANSLATION	protein_coding	-	CCDS51382.1	1	1044	20	23.33	6.5	677.4	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000127273	ENSMUSP00000119858	TRANSLATION	protein_coding	stop	-	3	171	0	4.33	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039936	Pik3cd	ENSMUST00000134534	ENSMUSP00000118988	TRANSLATION	protein_coding	stop	-	3	62	0	1.5	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039936	Pik3cd	ENSMUST00000146612	ENSMUSP00000121843	TRANSLATION	protein_coding	stop	-	2	117	0	2.5	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039936	Pik3cd	ENSMUST00000105689	ENSMUSP00000101314	TRANSLATION	protein_coding	-	CCDS51380.1	1	1043	20	23.33	6.5	675.5	0	-4,-5	-	-	19.886	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000038859	ENSMUSP00000036434	TRANSLATION	protein_coding	-	CCDS51383.1	1	1045	20	23.33	6.5	677.4	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000122059	ENSMUSP00000113844	TRANSLATION	protein_coding	-	-	1	1040	20	23.33	6.5	672.2	0	-4,-5	-	-	19.688	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000105690	ENSMUSP00000101315	TRANSLATION	protein_coding	-	CCDS51384.1	1	1047	20	23.33	6.5	670.5	0	-4,-5	-	-	19.586	PRINCIPAL:4
ENSMUSG00000039936	Pik3cd	ENSMUST00000137430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039936	Pik3cd	ENSMUST00000177654	ENSMUSP00000136045	TRANSLATION	protein_coding	-	CCDS51384.1	5	1047	20	23.33	6.5	670.5	0	-4,-5	-	-	19.586	ALTERNATIVE:1
ENSMUSG00000039936	Pik3cd	ENSMUST00000156309	ENSMUSP00000115716	TRANSLATION	protein_coding	stop	-	3	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039936	Pik3cd	ENSMUST00000131224	ENSMUSP00000115542	TRANSLATION	protein_coding	stop	-	3	145	0	3.58	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054679	Srsf12	ENSMUST00000108159	ENSMUSP00000103794	TRANSLATION	protein_coding	stop	-	5	261	0	2.8	6.3	66	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054679	Srsf12	ENSMUST00000067864	ENSMUSP00000067939	TRANSLATION	protein_coding	-	CCDS18022.1	1	266	0	0.2	0.5	0	0	-4,-2	-	-	0.426	PRINCIPAL:1
ENSMUSG00000028434	Epb41l4b	ENSMUST00000095076	ENSMUSP00000092687	TRANSLATION	protein_coding	-	-	5	899	0	6.5	0.5	259.9	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000028434	Epb41l4b	ENSMUST00000030142	ENSMUSP00000030142	TRANSLATION	protein_coding	-	CCDS51180.1	1	527	0	6.5	1.5	259.9	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000028434	Epb41l4b	ENSMUST00000136337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028434	Epb41l4b	ENSMUST00000150665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028434	Epb41l4b	ENSMUST00000044022	ENSMUSP00000037625	TRANSLATION	protein_coding	start	-	5	215	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028434	Epb41l4b	ENSMUST00000149109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028434	Epb41l4b	ENSMUST00000133859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028438	Kif24	ENSMUST00000127376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028438	Kif24	ENSMUST00000154535	ENSMUSP00000119009	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	25.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028438	Kif24	ENSMUST00000030148	ENSMUSP00000030148	TRANSLATION	protein_coding	-	-	1	1222	4	4.75	0	199.9	0	-4,-5	-	-	1.83	MINOR
ENSMUSG00000028438	Kif24	ENSMUST00000133497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028438	Kif24	ENSMUST00000141951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028438	Kif24	ENSMUST00000108055	ENSMUSP00000103690	TRANSLATION	protein_coding	-	CCDS18060.2	1	1356	11	7.5	0.5	350.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028438	Kif24	ENSMUST00000154175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028438	Kif24	ENSMUST00000131532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000097948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028524	Sgip1	ENSMUST00000136164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000183855	ENSMUSP00000139337	TRANSLATION	nonsense_mediated_decay	-	-	2	188	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028524	Sgip1	ENSMUST00000080728	ENSMUSP00000079553	TRANSLATION	protein_coding	-	CCDS18404.1	1	806	0	6.08	1.5	241.5	0	-4,-5	-	-	12.192	MINOR
ENSMUSG00000028524	Sgip1	ENSMUST00000131431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000140289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000137592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000142430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000156596	ENSMUSP00000115075	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028524	Sgip1	ENSMUST00000141624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000149547	ENSMUSP00000122556	TRANSLATION	protein_coding	start	-	5	575	0	6.08	0	241.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028524	Sgip1	ENSMUST00000066824	ENSMUSP00000063712	TRANSLATION	protein_coding	-	CCDS71429.1	1	659	0	6.08	8.8	241.5	0	-4,-5	-	-	15	PRINCIPAL:4
ENSMUSG00000028524	Sgip1	ENSMUST00000140676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028524	Sgip1	ENSMUST00000106882	ENSMUSP00000102495	TRANSLATION	protein_coding	-	-	5	826	0	6.08	2.7	241.5	0	-4,-5	-	-	12.654	MINOR
ENSMUSG00000028524	Sgip1	ENSMUST00000072481	ENSMUSP00000072301	TRANSLATION	protein_coding	-	CCDS71430.1	1	639	0	6.08	8.8	241.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000039713	Plekhg5	ENSMUST00000118648	ENSMUSP00000112707	TRANSLATION	protein_coding	-	-	5	1060	0	5.53	0.5	118.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039713	Plekhg5	ENSMUST00000142412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039713	Plekhg5	ENSMUST00000239128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039713	Plekhg5	ENSMUST00000105662	ENSMUSP00000101287	TRANSLATION	protein_coding	-	-	5	1041	0	5.53	0.5	118.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000039713	Plekhg5	ENSMUST00000123615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039713	Plekhg5	ENSMUST00000105661	ENSMUSP00000101286	TRANSLATION	protein_coding	-	CCDS18987.2	1	1073	0	5.53	0.5	118.6	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000039713	Plekhg5	ENSMUST00000084115	ENSMUSP00000081132	TRANSLATION	protein_coding	-	-	2	1071	0	5.53	0.5	118.6	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000039713	Plekhg5	ENSMUST00000140085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039713	Plekhg5	ENSMUST00000239025	ENSMUSP00000158992	TRANSLATION	protein_coding	-	-	-	1103	0	5.53	0.5	118.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000078722	Gm12394	ENSMUST00000107981	ENSMUSP00000103615	TRANSLATION	protein_coding	-	-	5	982	0	0	0	136.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000078235	Fam43b	ENSMUST00000105032	ENSMUSP00000100649	TRANSLATION	protein_coding	-	CCDS38928.1	-	330	0	0.16	1.5	240.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028458	Tesk1	ENSMUST00000060864	ENSMUSP00000050087	TRANSLATION	protein_coding	-	CCDS18094.1	1	627	21	6.125	0.5	156.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028458	Tesk1	ENSMUST00000126350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028458	Tesk1	ENSMUST00000138981	ENSMUSP00000121067	TRANSLATION	nonsense_mediated_decay	-	-	5	201	17	2.85	0	91.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028458	Tesk1	ENSMUST00000137178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028458	Tesk1	ENSMUST00000156810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059218	Gm13084	ENSMUST00000137635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059218	Gm13084	ENSMUST00000075045	ENSMUSP00000074557	TRANSLATION	protein_coding	-	CCDS38948.1	1	494	2	0	0.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000059218	Gm13084	ENSMUST00000105769	ENSMUSP00000101395	TRANSLATION	protein_coding	-	CCDS84819.1	1	348	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050215	Olfr70	ENSMUST00000055545	ENSMUSP00000060748	TRANSLATION	protein_coding	-	CCDS38744.1	1	316	0	0.32	1.5	171.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028417	Tal2	ENSMUST00000030124	ENSMUSP00000030124	TRANSLATION	protein_coding	-	CCDS18192.1	1	108	0	1	4.1	58	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000050493	Fam167b	ENSMUST00000142699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050493	Fam167b	ENSMUST00000052835	ENSMUSP00000050531	TRANSLATION	protein_coding	-	CCDS51307.1	1	162	0	0	7.5	81.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000055210	Foxd2	ENSMUST00000068654	ENSMUSP00000066868	TRANSLATION	protein_coding	-	CCDS18482.1	-	492	0	0.4	1.5	128.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028212	Ccne2	ENSMUST00000108324	ENSMUSP00000103960	TRANSLATION	protein_coding	-	CCDS17965.1	1	404	0	6.2	7.6	215.1	0	-4,-2	-	-	15	PRINCIPAL:4
ENSMUSG00000028212	Ccne2	ENSMUST00000149075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028212	Ccne2	ENSMUST00000145430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028212	Ccne2	ENSMUST00000170901	ENSMUSP00000130693	TRANSLATION	protein_coding	-	CCDS17965.1	1	404	0	6.2	7.6	215.1	0	-4,-2	-	-	15	PRINCIPAL:4
ENSMUSG00000028212	Ccne2	ENSMUST00000029866	ENSMUSP00000029866	TRANSLATION	protein_coding	-	CCDS17966.1	1	403	0	6.2	7.6	215.1	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000028212	Ccne2	ENSMUST00000147725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028212	Ccne2	ENSMUST00000144438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009640	Dmap1	ENSMUST00000102687	ENSMUSP00000099748	TRANSLATION	protein_coding	-	CCDS18536.1	1	468	0	2.4	2.7	360.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009640	Dmap1	ENSMUST00000135582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009640	Dmap1	ENSMUST00000129510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009640	Dmap1	ENSMUST00000134642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009640	Dmap1	ENSMUST00000127750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009640	Dmap1	ENSMUST00000123586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028403	Zdhhc21	ENSMUST00000030110	ENSMUSP00000030110	TRANSLATION	protein_coding	-	CCDS18294.1	1	265	8	0	13	113.3	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028403	Zdhhc21	ENSMUST00000156055	ENSMUSP00000120914	TRANSLATION	protein_coding	stop	-	2	26	0	0	0	0	1	-3,-7	-	-	-1	MINOR
ENSMUSG00000028403	Zdhhc21	ENSMUST00000173741	ENSMUSP00000133630	TRANSLATION	nonsense_mediated_decay	-	-	1	133	8	0	0.5	51.3	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000028403	Zdhhc21	ENSMUST00000139401	ENSMUSP00000121954	TRANSLATION	protein_coding	stop	-	5	109	5	0	0	0	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000028403	Zdhhc21	ENSMUST00000144139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028403	Zdhhc21	ENSMUST00000107239	ENSMUSP00000102859	TRANSLATION	protein_coding	-	CCDS18294.1	1	265	8	0	13	113.3	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028533	Izumo3	ENSMUST00000143542	ENSMUSP00000121187	TRANSLATION	protein_coding	start	-	1	193	0	0	0	83.2	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000028533	Izumo3	ENSMUST00000107108	ENSMUSP00000102725	TRANSLATION	protein_coding	-	CCDS51231.1	1	263	0	0	1.5	140.2	1	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000047799	Oog4	ENSMUST00000073641	ENSMUSP00000073325	TRANSLATION	protein_coding	-	CCDS84817.1	1	502	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000047799	Oog4	ENSMUST00000061277	ENSMUSP00000052217	TRANSLATION	protein_coding	-	CCDS18890.1	1	430	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000062627	Mysm1	ENSMUST00000125427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000124820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000132758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000134730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000149954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000131575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000155935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062627	Mysm1	ENSMUST00000075872	ENSMUSP00000075269	TRANSLATION	protein_coding	-	CCDS18363.1	1	819	3	5.456	0.5	156.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062627	Mysm1	ENSMUST00000136130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012123	Crybg2	ENSMUST00000132872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012123	Crybg2	ENSMUST00000149080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012123	Crybg2	ENSMUST00000149956	ENSMUSP00000123349	TRANSLATION	protein_coding	start/stop	-	5	293	0	4.4	0	261.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012123	Crybg2	ENSMUST00000137529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012123	Crybg2	ENSMUST00000121391	ENSMUSP00000114099	TRANSLATION	protein_coding	-	CCDS51323.1	1	1516	8	7.464	0.5	420.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000012123	Crybg2	ENSMUST00000149504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012123	Crybg2	ENSMUST00000143295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012123	Crybg2	ENSMUST00000146102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012123	Crybg2	ENSMUST00000140125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012123	Crybg2	ENSMUST00000219402	ENSMUSP00000152001	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012123	Crybg2	ENSMUST00000137053	ENSMUSP00000122303	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012123	Crybg2	ENSMUST00000227683	ENSMUSP00000154159	TRANSLATION	protein_coding	-	-	-	1825	8	7.464	0.5	420.2	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000012123	Crybg2	ENSMUST00000153392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046694	Tent5b	ENSMUST00000051676	ENSMUSP00000056015	TRANSLATION	protein_coding	-	CCDS18748.1	1	427	0	0	3.9	494.9	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000039105	Atp6v1g1	ENSMUST00000035301	ENSMUSP00000048770	TRANSLATION	protein_coding	-	CCDS18260.1	1	118	0	2.15	16.1	133.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000073721	Pramef20	ENSMUST00000121109	ENSMUSP00000112488	TRANSLATION	protein_coding	-	CCDS51364.1	5	477	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000039662	Icmt	ENSMUST00000125617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039662	Icmt	ENSMUST00000151372	ENSMUSP00000133950	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	0	0	0	3	-2,-3	-	-	-1	MINOR
ENSMUSG00000039662	Icmt	ENSMUST00000048892	ENSMUSP00000043390	TRANSLATION	protein_coding	-	CCDS18998.1	1	284	0	1.08	7.5	115.9	5	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000039662	Icmt	ENSMUST00000134242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028610	Dmrtb1	ENSMUST00000069271	ENSMUSP00000064220	TRANSLATION	protein_coding	-	CCDS51254.1	5	359	8	0.4	0.5	71.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028610	Dmrtb1	ENSMUST00000131776	ENSMUSP00000119617	TRANSLATION	protein_coding	start	-	1	203	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028610	Dmrtb1	ENSMUST00000131508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039555	Cylc2	ENSMUST00000166749	ENSMUSP00000125758	TRANSLATION	protein_coding	-	-	1	422	0	0	0.5	144.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000039555	Cylc2	ENSMUST00000156384	ENSMUSP00000158665	TRANSLATION	protein_coding	-	-	5	665	0	0	0.5	144.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028207	Asph	ENSMUST00000151232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028207	Asph	ENSMUST00000108340	ENSMUSP00000103977	TRANSLATION	protein_coding	-	CCDS51114.1	1	725	5	5	0.5	541.7	3	-4,-7	-	-	15.368	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000124408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028207	Asph	ENSMUST00000103004	ENSMUSP00000100069	TRANSLATION	protein_coding	-	CCDS17959.1	1	207	3	0	1.5	158.2	3	-4,-6	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000078139	ENSMUSP00000077273	TRANSLATION	protein_coding	-	CCDS38690.1	1	741	5	5	0.5	568.9	3	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000028207	Asph	ENSMUST00000084912	ENSMUSP00000081975	TRANSLATION	protein_coding	stop	-	2	163	3	0	0	198	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000130617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028207	Asph	ENSMUST00000108334	ENSMUSP00000103971	TRANSLATION	protein_coding	-	CCDS51112.1	5	272	3	0	0.5	340.8	3	-4,-6	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000152526	ENSMUSP00000116874	TRANSLATION	protein_coding	stop	-	1	149	3	0	0	225.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000084915	ENSMUSP00000081978	TRANSLATION	protein_coding	-	CCDS51116.1	5	310	3	0	0.5	340.8	3	-4,-7	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000146441	ENSMUSP00000116899	TRANSLATION	protein_coding	-	CCDS51118.1	1	212	3	0	0.5	166.8	3	-4,-7	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000108333	ENSMUSP00000103970	TRANSLATION	protein_coding	-	CCDS51113.1	5	261	3	0	0.5	283.6	3	-4,-5	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000131605	ENSMUSP00000118518	TRANSLATION	protein_coding	stop	-	3	73	3	0	0	118.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000108339	ENSMUSP00000103976	TRANSLATION	protein_coding	-	CCDS71341.1	1	658	5	5	0.5	488.5	0	-4,-5	-	-	12.176	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000152058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028207	Asph	ENSMUST00000098275	ENSMUSP00000095876	TRANSLATION	protein_coding	-	-	5	197	3	0	0	173.3	3	-4,-7	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000038564	ENSMUSP00000049018	TRANSLATION	protein_coding	-	CCDS51117.1	1	245	3	0	0.5	188.1	3	-4,-7	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000108337	ENSMUSP00000103974	TRANSLATION	protein_coding	-	CCDS51115.1	1	294	3	0	0.5	313.6	3	-4,-7	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000108335	ENSMUSP00000103972	TRANSLATION	protein_coding	-	CCDS51111.1	5	215	3	0	0.5	158.6	3	-4,-6	-	-	3	MINOR
ENSMUSG00000028207	Asph	ENSMUST00000137375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078354	Ifna2	ENSMUST00000105147	ENSMUSP00000100778	TRANSLATION	protein_coding	-	CCDS18326.1	-	190	3	1	1.5	201.8	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028312	Smc2	ENSMUST00000131163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028312	Smc2	ENSMUST00000146787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028312	Smc2	ENSMUST00000117280	ENSMUSP00000113940	TRANSLATION	protein_coding	-	CCDS18180.1	1	1191	7	11.88	5.1	261.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028312	Smc2	ENSMUST00000102915	ENSMUSP00000099979	TRANSLATION	protein_coding	-	CCDS18180.1	1	1191	7	11.88	5.1	261.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028312	Smc2	ENSMUST00000142227	ENSMUSP00000114228	TRANSLATION	protein_coding	stop	-	1	471	7	3.48	0	120.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003810	Mast2	ENSMUST00000239239	ENSMUSP00000159270	TRANSLATION	protein_coding	-	-	-	1642	19	5.96	0	696.3	0	-4,0	-	-	17.442	ALTERNATIVE:2
ENSMUSG00000003810	Mast2	ENSMUST00000106486	ENSMUSP00000102095	TRANSLATION	protein_coding	-	CCDS38850.1	1	1800	19	5.96	0.5	705.6	0	-4,-7	-	-	18	PRINCIPAL:4
ENSMUSG00000003810	Mast2	ENSMUST00000156884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000134460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000144281	ENSMUSP00000122625	TRANSLATION	protein_coding	stop	-	5	144	0	0	0	124	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000003810	Mast2	ENSMUST00000128713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000147262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000239177	ENSMUSP00000159199	TRANSLATION	protein_coding	-	-	-	1714	19	5.96	0.5	705.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000003810	Mast2	ENSMUST00000106484	ENSMUSP00000102093	TRANSLATION	protein_coding	-	-	1	1739	19	5.96	0.5	705.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000003810	Mast2	ENSMUST00000123761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000128252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000147459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000106485	ENSMUSP00000102094	TRANSLATION	protein_coding	-	CCDS38849.1	1	1794	19	5.96	0.5	696.3	0	-4,-7	-	-	17.442	ALTERNATIVE:2
ENSMUSG00000003810	Mast2	ENSMUST00000151347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000131809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003810	Mast2	ENSMUST00000003908	ENSMUSP00000003908	TRANSLATION	protein_coding	-	-	1	1733	19	5.96	0	696.3	0	-4,-7	-	-	17.442	ALTERNATIVE:2
ENSMUSG00000003810	Mast2	ENSMUST00000123072	ENSMUSP00000118340	TRANSLATION	protein_coding	stop	-	3	203	0	0	0	231.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000129032	ENSMUSP00000115897	TRANSLATION	protein_coding	start	-	5	261	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000155023	ENSMUSP00000116071	TRANSLATION	protein_coding	start	-	1	699	2	4.3	1.2	126.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000135922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040606	Kazn	ENSMUST00000173068	ENSMUSP00000134498	TRANSLATION	protein_coding	start/stop	-	5	242	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000036476	ENSMUSP00000038835	TRANSLATION	protein_coding	-	CCDS51350.1	1	414	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000040606	Kazn	ENSMUST00000144611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040606	Kazn	ENSMUST00000172864	ENSMUSP00000133972	TRANSLATION	protein_coding	start	-	1	345	2	0	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000174432	ENSMUSP00000134631	TRANSLATION	protein_coding	start	-	5	346	2	0	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040606	Kazn	ENSMUST00000148812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028838	Extl1	ENSMUST00000142730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028838	Extl1	ENSMUST00000030643	ENSMUSP00000030643	TRANSLATION	protein_coding	-	CCDS18770.1	1	669	0	2.33	1.5	403.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028838	Extl1	ENSMUST00000132387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058579	Cela2a	ENSMUST00000155826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058579	Cela2a	ENSMUST00000127962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058579	Cela2a	ENSMUST00000102481	ENSMUSP00000099539	TRANSLATION	protein_coding	-	CCDS18884.1	1	271	5	6	1.5	231.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000135228	ENSMUSP00000146110	TRANSLATION	protein_coding	-	-	3	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000124452	ENSMUSP00000145705	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000143448	ENSMUSP00000145831	TRANSLATION	protein_coding	-	-	3	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000134320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000131447	ENSMUSP00000145849	TRANSLATION	protein_coding	-	-	5	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000144222	ENSMUSP00000146054	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000125921	ENSMUSP00000145784	TRANSLATION	protein_coding	-	-	2	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000086322	E130218I03Rik	ENSMUST00000122952	ENSMUSP00000145835	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000028431	Elp1	ENSMUST00000150002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028431	Elp1	ENSMUST00000171411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028431	Elp1	ENSMUST00000126441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028431	Elp1	ENSMUST00000139445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028431	Elp1	ENSMUST00000030140	ENSMUSP00000030140	TRANSLATION	protein_coding	-	CCDS38765.1	1	1333	0	15.75	1.5	1019.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028431	Elp1	ENSMUST00000140595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040715	Rsc1a1	ENSMUST00000105782	ENSMUSP00000101408	TRANSLATION	protein_coding	-	CCDS18879.1	-	582	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000096011	Ifna15	ENSMUST00000102809	ENSMUSP00000099873	TRANSLATION	protein_coding	-	CCDS18319.1	-	190	0	1	1.5	210.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028675	Pnrc2	ENSMUST00000180300	ENSMUSP00000136785	TRANSLATION	protein_coding	-	-	1	56	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000028675	Pnrc2	ENSMUST00000142585	ENSMUSP00000120788	TRANSLATION	protein_coding	stop	-	3	37	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028675	Pnrc2	ENSMUST00000030436	ENSMUSP00000030436	TRANSLATION	protein_coding	-	CCDS18792.1	1	140	0	2	6.5	29.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028584	Lrrc38	ENSMUST00000052458	ENSMUSP00000053597	TRANSLATION	protein_coding	-	CCDS51351.1	1	298	0	0.96	0.5	95	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028344	Invs	ENSMUST00000156602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028344	Invs	ENSMUST00000143433	ENSMUSP00000138580	TRANSLATION	nonsense_mediated_decay	-	-	1	436	0	6.08	0	207.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028344	Invs	ENSMUST00000129480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028344	Invs	ENSMUST00000151762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028344	Invs	ENSMUST00000030029	ENSMUSP00000030029	TRANSLATION	protein_coding	-	CCDS18166.1	1	1062	0	7.76	0.5	318.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028344	Invs	ENSMUST00000149555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078504	Aadacl4fm5	ENSMUST00000105746	ENSMUSP00000101372	TRANSLATION	protein_coding	-	CCDS51367.1	3	393	3	1.15	0.5	0	0	2,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000057530	Ece1	ENSMUST00000130407	ENSMUSP00000125529	TRANSLATION	protein_coding	stop	-	1	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057530	Ece1	ENSMUST00000129607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057530	Ece1	ENSMUST00000151110	ENSMUSP00000114671	TRANSLATION	protein_coding	stop	-	3	205	0	2	0	98.3	1	-2,-4	-	-	-1	MINOR
ENSMUSG00000057530	Ece1	ENSMUST00000102518	ENSMUSP00000099576	TRANSLATION	protein_coding	-	CCDS18822.1	1	753	7	15.25	10.4	674.2	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000042993	Ifnk	ENSMUST00000058595	ENSMUSP00000054273	TRANSLATION	protein_coding	-	CCDS18037.1	1	199	0	0.6	0.5	123.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039967	Zfp292	ENSMUST00000047950	ENSMUSP00000037233	TRANSLATION	protein_coding	-	CCDS51138.1	1	2698	45	0	0.5	32.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000039967	Zfp292	ENSMUST00000098163	ENSMUSP00000095766	TRANSLATION	protein_coding	-	-	1	2693	45	0	0	32.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029071	Dvl1	ENSMUST00000168552	ENSMUSP00000133137	TRANSLATION	protein_coding	-	CCDS19045.1	1	695	0	8.4	3.9	622	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000029071	Dvl1	ENSMUST00000156997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029071	Dvl1	ENSMUST00000140529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029071	Dvl1	ENSMUST00000141539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029071	Dvl1	ENSMUST00000129450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029071	Dvl1	ENSMUST00000143457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029071	Dvl1	ENSMUST00000133184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029071	Dvl1	ENSMUST00000030948	ENSMUSP00000030948	TRANSLATION	protein_coding	-	CCDS19045.1	1	695	0	8.4	3.9	622	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028992	Nmnat1	ENSMUST00000126896	ENSMUSP00000116049	TRANSLATION	protein_coding	stop	-	2	37	7	1	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028992	Nmnat1	ENSMUST00000119921	ENSMUSP00000113156	TRANSLATION	protein_coding	-	-	1	149	15	3	1.2	71.4	0	-4,-5	-	-	7.98	MINOR
ENSMUSG00000028992	Nmnat1	ENSMUST00000030845	ENSMUSP00000030845	TRANSLATION	protein_coding	-	CCDS18960.1	1	285	28	4	1.5	105.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028992	Nmnat1	ENSMUST00000105693	ENSMUSP00000101318	TRANSLATION	protein_coding	-	CCDS18960.1	1	285	28	4	1.5	105.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028729	Ebna1bp2	ENSMUST00000126458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028729	Ebna1bp2	ENSMUST00000030501	ENSMUSP00000030501	TRANSLATION	protein_coding	-	CCDS18555.1	1	306	0	0	5.1	289.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028729	Ebna1bp2	ENSMUST00000149837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028729	Ebna1bp2	ENSMUST00000147373	ENSMUSP00000114372	TRANSLATION	protein_coding	stop	-	3	186	0	0	0	193.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028729	Ebna1bp2	ENSMUST00000130219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046450	Olfr71	ENSMUST00000055401	ENSMUSP00000060230	TRANSLATION	protein_coding	-	CCDS18110.1	-	312	0	0.42	3.9	176.6	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046450	Olfr71	ENSMUST00000217544	ENSMUSP00000149725	TRANSLATION	protein_coding	-	CCDS18110.1	5	312	0	0.42	3.9	176.6	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046450	Olfr71	ENSMUST00000107862	ENSMUSP00000103494	TRANSLATION	protein_coding	-	CCDS18110.1	3	312	0	0.42	3.9	176.6	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000063446	Plppr1	ENSMUST00000076670	ENSMUSP00000075966	TRANSLATION	protein_coding	-	CCDS18170.1	1	325	0	0	17	74.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000063446	Plppr1	ENSMUST00000151692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063446	Plppr1	ENSMUST00000137884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038544	Inip	ENSMUST00000138097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038544	Inip	ENSMUST00000143756	ENSMUSP00000115701	TRANSLATION	protein_coding	stop	-	3	72	0	2.25	4.8	71.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038544	Inip	ENSMUST00000128548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038544	Inip	ENSMUST00000107526	ENSMUSP00000103150	TRANSLATION	protein_coding	-	-	1	74	0	2.5	4.8	71.1	0	-4,-2	-	-	10.256	MINOR
ENSMUSG00000038544	Inip	ENSMUST00000095063	ENSMUSP00000092673	TRANSLATION	protein_coding	-	CCDS18225.1	1	104	0	3.58	17.3	77.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000090125	Pou3f1	ENSMUST00000053491	ENSMUSP00000137374	TRANSLATION	protein_coding	-	CCDS57296.1	-	449	0	0.8	1.7	190.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028581	Laptm5	ENSMUST00000156742	ENSMUSP00000123382	TRANSLATION	protein_coding	start/stop	-	1	241	0	0	0	0	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000028581	Laptm5	ENSMUST00000156170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028581	Laptm5	ENSMUST00000156225	ENSMUSP00000121133	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000028581	Laptm5	ENSMUST00000151698	ENSMUSP00000118415	TRANSLATION	protein_coding	-	CCDS18712.1	1	261	0	0	1.5	0	8	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028581	Laptm5	ENSMUST00000143450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028581	Laptm5	ENSMUST00000139023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028581	Laptm5	ENSMUST00000136082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028581	Laptm5	ENSMUST00000030316	ENSMUSP00000030316	TRANSLATION	protein_coding	start	-	1	264	0	0	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000028581	Laptm5	ENSMUST00000123550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028581	Laptm5	ENSMUST00000125332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050796	B3galt6	ENSMUST00000052185	ENSMUSP00000057521	TRANSLATION	protein_coding	-	CCDS19053.1	-	325	0	0	1.5	96.2	0	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028622	Mrpl37	ENSMUST00000141150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028622	Mrpl37	ENSMUST00000125157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028622	Mrpl37	ENSMUST00000030365	ENSMUSP00000030365	TRANSLATION	protein_coding	-	CCDS18429.1	1	423	0	6.75	5.1	34.2	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028622	Mrpl37	ENSMUST00000138788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028622	Mrpl37	ENSMUST00000125397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048766	Skint10	ENSMUST00000060327	ENSMUSP00000058838	TRANSLATION	protein_coding	-	CCDS38841.1	1	354	0	0.825	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000048766	Skint10	ENSMUST00000137128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048766	Skint10	ENSMUST00000068851	ENSMUSP00000067744	TRANSLATION	protein_coding	-	-	1	112	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000123280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028601	Echdc2	ENSMUST00000130942	ENSMUSP00000124746	TRANSLATION	nonsense_mediated_decay	-	-	5	111	9	2.33	0	45.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000106691	ENSMUSP00000102302	TRANSLATION	protein_coding	start	-	5	119	4	2.83	0	50.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000116307	ENSMUSP00000112009	TRANSLATION	protein_coding	-	-	5	265	16	6.52	0	131.7	0	-4,0	-	-	8.628	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000138701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028601	Echdc2	ENSMUST00000135718	ENSMUSP00000114371	TRANSLATION	protein_coding	start/stop	-	5	185	13	5.24	0	97.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000125647	ENSMUSP00000123913	TRANSLATION	nonsense_mediated_decay	-	-	2	84	0	0.28	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000116309	ENSMUSP00000112011	TRANSLATION	protein_coding	-	CCDS18447.2	1	296	21	7.52	1.5	199	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028601	Echdc2	ENSMUST00000133049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028601	Echdc2	ENSMUST00000150487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028601	Echdc2	ENSMUST00000052999	ENSMUSP00000051268	TRANSLATION	protein_coding	-	CCDS18447.2	1	296	21	7.52	1.5	199	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028601	Echdc2	ENSMUST00000126900	ENSMUSP00000123734	TRANSLATION	nonsense_mediated_decay	start	-	5	38	5	1.33	0	39.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028601	Echdc2	ENSMUST00000127392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029033	Acap3	ENSMUST00000140855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029033	Acap3	ENSMUST00000145654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029033	Acap3	ENSMUST00000079031	ENSMUSP00000078040	TRANSLATION	protein_coding	-	-	5	829	4	15.63	2.7	521.3	0	-4,-5	-	-	16.642	MINOR
ENSMUSG00000029033	Acap3	ENSMUST00000126582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029033	Acap3	ENSMUST00000137726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029033	Acap3	ENSMUST00000131372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029033	Acap3	ENSMUST00000105584	ENSMUSP00000101209	TRANSLATION	protein_coding	-	CCDS38997.1	1	833	4	15.63	6.3	521.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029033	Acap3	ENSMUST00000131168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029033	Acap3	ENSMUST00000140902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040616	Tmem51	ENSMUST00000036572	ENSMUSP00000042919	TRANSLATION	protein_coding	-	CCDS18886.1	1	249	0	0	5.1	291.7	0	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000070583	Fv1	ENSMUST00000094481	ENSMUSP00000092054	TRANSLATION	protein_coding	-	CCDS38964.1	-	459	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000066031	Gm13023	ENSMUST00000105770	ENSMUSP00000101396	TRANSLATION	protein_coding	-	CCDS84818.1	2	175	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000066031	Gm13023	ENSMUST00000139978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066031	Gm13023	ENSMUST00000149739	ENSMUSP00000115387	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066031	Gm13023	ENSMUST00000085144	ENSMUSP00000082232	TRANSLATION	protein_coding	-	CCDS18894.1	1	498	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000028330	Ncbp1	ENSMUST00000133286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028330	Ncbp1	ENSMUST00000131187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028330	Ncbp1	ENSMUST00000030014	ENSMUSP00000030014	TRANSLATION	protein_coding	-	CCDS18145.1	1	790	0	21	9.7	391	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029019	Nppb	ENSMUST00000103231	ENSMUSP00000099521	TRANSLATION	protein_coding	-	CCDS18926.1	1	121	0	0.6	1.5	55.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078511	Pramef25	ENSMUST00000105766	ENSMUSP00000101392	TRANSLATION	protein_coding	-	CCDS51359.1	5	494	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028884	Rpa2	ENSMUST00000130090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028884	Rpa2	ENSMUST00000133415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028884	Rpa2	ENSMUST00000130444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028884	Rpa2	ENSMUST00000153046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028884	Rpa2	ENSMUST00000156968	ENSMUSP00000123780	TRANSLATION	protein_coding	start	-	5	70	0	2	0	47	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028884	Rpa2	ENSMUST00000102561	ENSMUSP00000099621	TRANSLATION	protein_coding	-	CCDS18734.1	1	270	0	7.5	6.3	91.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028988	Ctnnbip1	ENSMUST00000105692	ENSMUSP00000101317	TRANSLATION	protein_coding	-	CCDS38975.1	1	81	0	2.5	21.5	82.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028988	Ctnnbip1	ENSMUST00000030839	ENSMUSP00000030839	TRANSLATION	protein_coding	-	CCDS38975.1	1	81	0	2.5	21.5	82.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000066153	Mup21	ENSMUST00000077719	ENSMUSP00000076899	TRANSLATION	protein_coding	-	CCDS18235.1	1	181	0	5.08	1.5	121.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028382	Ptbp3	ENSMUST00000172768	ENSMUSP00000134102	TRANSLATION	protein_coding	-	-	5	520	0	12.38	6.4	228.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028382	Ptbp3	ENSMUST00000030076	ENSMUSP00000030076	TRANSLATION	protein_coding	-	CCDS18221.1	1	523	0	12.38	6.4	228.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028382	Ptbp3	ENSMUST00000173699	ENSMUSP00000134290	TRANSLATION	protein_coding	-	-	5	457	0	11.38	3.4	228.6	0	-4,-5	-	-	10.89	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000173884	ENSMUSP00000133996	TRANSLATION	protein_coding	stop	-	3	146	0	3.55	0	43.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000173268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028382	Ptbp3	ENSMUST00000174586	ENSMUSP00000133612	TRANSLATION	protein_coding	-	-	5	554	0	12.38	6.3	228.6	0	-4,-5	-	-	13.962	ALTERNATIVE:1
ENSMUSG00000028382	Ptbp3	ENSMUST00000102883	ENSMUSP00000099947	TRANSLATION	protein_coding	-	CCDS18220.2	1	551	0	12.38	6.4	228.6	0	-4,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000028382	Ptbp3	ENSMUST00000148331	ENSMUSP00000122840	TRANSLATION	protein_coding	-	-	5	520	0	12.38	6.4	228.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028382	Ptbp3	ENSMUST00000140925	ENSMUSP00000122138	TRANSLATION	protein_coding	-	-	3	104	0	1	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000172471	ENSMUSP00000133886	TRANSLATION	protein_coding	start/stop	-	5	188	0	4.5	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000174748	ENSMUSP00000133884	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000134879	ENSMUSP00000134490	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028382	Ptbp3	ENSMUST00000151313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028567	Txndc12	ENSMUST00000154017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028567	Txndc12	ENSMUST00000147581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028567	Txndc12	ENSMUST00000030296	ENSMUSP00000030296	TRANSLATION	protein_coding	-	CCDS18457.1	1	170	9	4.85	2.7	61.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028555	Ttc39a	ENSMUST00000139237	ENSMUSP00000121779	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	129.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028555	Ttc39a	ENSMUST00000106618	ENSMUSP00000102229	TRANSLATION	protein_coding	-	CCDS51260.1	1	578	0	0	1.5	558.4	0	-4,-5	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000028555	Ttc39a	ENSMUST00000064129	ENSMUSP00000066334	TRANSLATION	protein_coding	-	CCDS18463.1	1	576	0	0	3.9	558.4	0	-4,-5	-	-	7	PRINCIPAL:3
ENSMUSG00000028555	Ttc39a	ENSMUST00000124209	ENSMUSP00000118672	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	166.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028555	Ttc39a	ENSMUST00000150909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028555	Ttc39a	ENSMUST00000126797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028555	Ttc39a	ENSMUST00000106619	ENSMUSP00000102230	TRANSLATION	protein_coding	-	-	1	189	0	0	0	121	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028555	Ttc39a	ENSMUST00000153315	ENSMUSP00000117621	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	173.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035212	Leprot	ENSMUST00000106927	ENSMUSP00000102540	TRANSLATION	protein_coding	-	-	1	108	0	0	0	70.7	5	0,-4	-	-	2.136	MINOR
ENSMUSG00000035212	Leprot	ENSMUST00000030254	ENSMUSP00000030254	TRANSLATION	protein_coding	-	CCDS18396.1	1	131	0	0	21.5	135.1	6	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000078498	Zfp988	ENSMUST00000166764	ENSMUSP00000127018	TRANSLATION	protein_coding	start/stop	-	-	21	2	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078498	Zfp988	ENSMUST00000148762	ENSMUSP00000120413	TRANSLATION	protein_coding	-	-	5	633	56	2.75	0	406.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000071005	Ccl19	ENSMUST00000140546	ENSMUSP00000144891	TRANSLATION	protein_coding	-	-	5	116	0	2.15	0	69.8	0	3,-2	-	-	11.61	ALTERNATIVE:2
ENSMUSG00000071005	Ccl19	ENSMUST00000102957	ENSMUSP00000100022	TRANSLATION	protein_coding	-	CCDS18080.1	1	108	0	2.3	1.5	69.8	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000071005	Ccl19	ENSMUST00000134240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029074	Ttll10	ENSMUST00000183563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029074	Ttll10	ENSMUST00000184348	ENSMUSP00000139316	TRANSLATION	protein_coding	-	-	5	704	19	2.965	0	157.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000029074	Ttll10	ENSMUST00000153649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029074	Ttll10	ENSMUST00000184684	ENSMUSP00000139077	TRANSLATION	protein_coding	stop	-	5	458	19	2.965	0	157.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029074	Ttll10	ENSMUST00000051509	ENSMUSP00000055671	TRANSLATION	protein_coding	-	CCDS19058.1	1	675	19	2.965	0.5	157.2	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000029074	Ttll10	ENSMUST00000097731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029074	Ttll10	ENSMUST00000184750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029074	Ttll10	ENSMUST00000030951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036062	Phf24	ENSMUST00000131234	ENSMUSP00000138332	TRANSLATION	protein_coding	start	-	5	127	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000138425	ENSMUSP00000115816	TRANSLATION	protein_coding	start/stop	-	3	256	6	2.4	0	74.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000151824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036062	Phf24	ENSMUST00000132173	ENSMUSP00000138443	TRANSLATION	protein_coding	stop	-	2	70	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000069184	ENSMUSP00000071011	TRANSLATION	protein_coding	-	CCDS18083.1	1	363	8	2.9	1.5	128.5	0	-4,-5	-	-	18.231	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000124380	ENSMUSP00000138593	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000139100	ENSMUSP00000138130	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036062	Phf24	ENSMUST00000107975	ENSMUSP00000103609	TRANSLATION	protein_coding	-	CCDS84719.1	2	400	8	2.9	7.5	128.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000036062	Phf24	ENSMUST00000107976	ENSMUSP00000103610	TRANSLATION	protein_coding	-	CCDS18083.1	1	363	8	2.9	1.5	128.5	0	-4,-5	-	-	18.231	MINOR
ENSMUSG00000028821	Syf2	ENSMUST00000030622	ENSMUSP00000030622	TRANSLATION	protein_coding	-	CCDS18781.1	1	242	0	6.264	3.9	191.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028821	Syf2	ENSMUST00000156334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028821	Syf2	ENSMUST00000144037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028221	Pip4p2	ENSMUST00000029875	ENSMUSP00000029875	TRANSLATION	protein_coding	-	CCDS17981.1	1	257	9	0	14.1	338.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038630	Zkscan16	ENSMUST00000107554	ENSMUSP00000103178	TRANSLATION	protein_coding	-	CCDS38771.1	5	728	35	2.4	0.5	333.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028683	Eif2b3	ENSMUST00000106447	ENSMUSP00000102055	TRANSLATION	protein_coding	-	CCDS18524.1	1	445	22	5.19	0.5	0	0	-4,-6	-	-	11.082	MINOR
ENSMUSG00000028683	Eif2b3	ENSMUST00000155181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028683	Eif2b3	ENSMUST00000129587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028683	Eif2b3	ENSMUST00000151760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028683	Eif2b3	ENSMUST00000070610	ENSMUSP00000070334	TRANSLATION	protein_coding	-	-	5	401	22	4.95	1.2	0	0	-4,-6	-	-	10.695	MINOR
ENSMUSG00000028683	Eif2b3	ENSMUST00000135121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028683	Eif2b3	ENSMUST00000106448	ENSMUSP00000102056	TRANSLATION	protein_coding	-	CCDS51279.1	5	452	22	5.65	7.5	0	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000089717	Olfr275	ENSMUST00000135738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089717	Olfr275	ENSMUST00000219705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089717	Olfr275	ENSMUST00000095085	ENSMUSP00000092700	TRANSLATION	protein_coding	-	CCDS18183.1	-	319	0	0.36	1.5	181.1	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028575	Eqtn	ENSMUST00000030309	ENSMUSP00000030309	TRANSLATION	protein_coding	-	CCDS18362.1	1	337	0	0	0.5	307.6	2	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000028575	Eqtn	ENSMUST00000107097	ENSMUSP00000102714	TRANSLATION	protein_coding	-	CCDS71422.1	1	296	0	0	0.5	285.5	2	0,-3	-	-	4.674	MINOR
ENSMUSG00000041052	Slc7a13	ENSMUST00000035890	ENSMUSP00000036228	TRANSLATION	protein_coding	-	CCDS17993.1	1	478	0	1.36	1.5	61	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062937	Mtap	ENSMUST00000204571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062937	Mtap	ENSMUST00000058030	ENSMUSP00000061092	TRANSLATION	protein_coding	-	CCDS18349.1	1	283	9	6.33	9.6	164	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000047675	Rps8	ENSMUST00000137423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047675	Rps8	ENSMUST00000140226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047675	Rps8	ENSMUST00000127037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047675	Rps8	ENSMUST00000102696	ENSMUSP00000099757	TRANSLATION	protein_coding	-	CCDS18530.1	1	208	0	5	15.5	212.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047675	Rps8	ENSMUST00000141219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047675	Rps8	ENSMUST00000144051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028860	Sytl1	ENSMUST00000142039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028860	Sytl1	ENSMUST00000105908	ENSMUSP00000101528	TRANSLATION	protein_coding	-	-	5	503	0	5.2	0	84.7	0	-4,-7	-	-	8.736	MINOR
ENSMUSG00000028860	Sytl1	ENSMUST00000030674	ENSMUSP00000030674	TRANSLATION	protein_coding	-	CCDS38902.1	1	568	0	6	0.5	112.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028860	Sytl1	ENSMUST00000154911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028497	Hacd4	ENSMUST00000132493	ENSMUSP00000119411	TRANSLATION	protein_coding	start	-	1	262	0	0	0	104.2	5	-4,0	-	-	-1	MINOR
ENSMUSG00000028497	Hacd4	ENSMUST00000030221	ENSMUSP00000030221	TRANSLATION	protein_coding	-	CCDS18317.1	1	232	0	0	6.3	119.7	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000028497	Hacd4	ENSMUST00000151280	ENSMUSP00000122565	TRANSLATION	protein_coding	start	-	1	252	0	0	0	119.7	5	-4,0	-	-	-1	MINOR
ENSMUSG00000078500	Zfp986	ENSMUST00000123460	ENSMUSP00000116281	TRANSLATION	protein_coding	stop	-	2	401	23	2.35	0	224.2	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000078500	Zfp986	ENSMUST00000166629	ENSMUSP00000130542	TRANSLATION	protein_coding	start/stop	-	-	21	2	0.75	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000039911	Spsb1	ENSMUST00000156451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039911	Spsb1	ENSMUST00000149360	ENSMUSP00000117083	TRANSLATION	protein_coding	stop	-	2	38	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039911	Spsb1	ENSMUST00000105684	ENSMUSP00000101309	TRANSLATION	protein_coding	-	CCDS18966.1	1	273	3	3.1	18.3	111.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039911	Spsb1	ENSMUST00000135896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039911	Spsb1	ENSMUST00000105685	ENSMUSP00000101310	TRANSLATION	protein_coding	-	CCDS18966.1	1	273	3	3.1	18.3	111.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039911	Spsb1	ENSMUST00000167342	ENSMUSP00000128004	TRANSLATION	protein_coding	stop	-	5	39	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039911	Spsb1	ENSMUST00000149743	ENSMUSP00000116808	TRANSLATION	protein_coding	stop	-	2	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039911	Spsb1	ENSMUST00000038562	ENSMUSP00000048969	TRANSLATION	protein_coding	-	CCDS18966.1	1	273	3	3.1	18.3	111.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039911	Spsb1	ENSMUST00000125135	ENSMUSP00000115149	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039911	Spsb1	ENSMUST00000156897	ENSMUSP00000119558	TRANSLATION	protein_coding	stop	-	3	201	2	1.5	0	46.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028468	Rgp1	ENSMUST00000141612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028468	Rgp1	ENSMUST00000117140	ENSMUSP00000113476	TRANSLATION	protein_coding	-	-	1	363	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028468	Rgp1	ENSMUST00000141782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028468	Rgp1	ENSMUST00000135895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028468	Rgp1	ENSMUST00000131178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028468	Rgp1	ENSMUST00000030190	ENSMUSP00000030190	TRANSLATION	protein_coding	-	CCDS38741.1	1	391	0	0	8.8	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000028468	Rgp1	ENSMUST00000107886	ENSMUSP00000103518	TRANSLATION	protein_coding	-	CCDS38741.1	5	391	0	0	8.8	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000066097	Cyp2j11	ENSMUST00000015368	ENSMUSP00000132180	TRANSLATION	protein_coding	-	CCDS38814.1	1	504	31	8.2	0.5	439.3	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000070821	Olfr1340	ENSMUST00000094834	ENSMUSP00000092430	TRANSLATION	protein_coding	-	CCDS18558.1	-	315	0	0.28	3.9	192	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000070821	Olfr1340	ENSMUST00000213436	ENSMUSP00000150483	TRANSLATION	protein_coding	-	CCDS18558.1	5	315	0	0.28	3.9	192	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000070821	Olfr1340	ENSMUST00000217334	ENSMUSP00000149563	TRANSLATION	protein_coding	-	CCDS18558.1	3	315	0	0.28	3.9	192	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000070821	Olfr1340	ENSMUST00000216242	ENSMUSP00000149224	TRANSLATION	protein_coding	-	CCDS18558.1	3	315	0	0.28	3.9	192	5	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000039740	Alg2	ENSMUST00000143104	ENSMUSP00000121934	TRANSLATION	protein_coding	start/stop	-	2	177	6	0	0	36.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039740	Alg2	ENSMUST00000136912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039740	Alg2	ENSMUST00000044148	ENSMUSP00000043580	TRANSLATION	protein_coding	-	CCDS18161.1	1	415	19	0.96	3.9	121.8	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000028530	Jak1	ENSMUST00000147211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028530	Jak1	ENSMUST00000136167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028530	Jak1	ENSMUST00000155328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028530	Jak1	ENSMUST00000102781	ENSMUSP00000099842	TRANSLATION	protein_coding	-	CCDS18393.1	1	1153	2	23	6.3	487.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028530	Jak1	ENSMUST00000149297	ENSMUSP00000122957	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028530	Jak1	ENSMUST00000132292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028530	Jak1	ENSMUST00000151235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028530	Jak1	ENSMUST00000125968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043207	Zmpste24	ENSMUST00000135788	ENSMUSP00000122588	TRANSLATION	protein_coding	start/stop	-	5	146	0	2.83	0	135.9	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000043207	Zmpste24	ENSMUST00000143768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043207	Zmpste24	ENSMUST00000058754	ENSMUSP00000053900	TRANSLATION	protein_coding	-	CCDS18600.1	1	475	4	10.08	8.8	464.7	5	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000028518	Prkaa2	ENSMUST00000030243	ENSMUSP00000030243	TRANSLATION	protein_coding	-	CCDS18416.1	1	552	18	8.75	9.6	243.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000043621	Ubxn10	ENSMUST00000105809	ENSMUSP00000101435	TRANSLATION	protein_coding	-	CCDS18830.1	1	277	0	0	0.5	38.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043621	Ubxn10	ENSMUST00000105811	ENSMUSP00000101437	TRANSLATION	protein_coding	-	CCDS18830.1	1	277	0	0	0.5	38.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043621	Ubxn10	ENSMUST00000135156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043621	Ubxn10	ENSMUST00000105810	ENSMUSP00000101436	TRANSLATION	protein_coding	-	CCDS18830.1	1	277	0	0	0.5	38.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043621	Ubxn10	ENSMUST00000146415	ENSMUSP00000117219	TRANSLATION	nonsense_mediated_decay	-	-	1	277	0	0	0.5	38.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041153	Osgin2	ENSMUST00000134048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041153	Osgin2	ENSMUST00000037198	ENSMUSP00000047473	TRANSLATION	protein_coding	-	CCDS17987.1	1	550	24	0	6.3	0	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000041153	Osgin2	ENSMUST00000124770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041153	Osgin2	ENSMUST00000148819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041153	Osgin2	ENSMUST00000149891	ENSMUSP00000121807	TRANSLATION	protein_coding	stop	-	3	185	6	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078721	Fam205a1	ENSMUST00000107979	ENSMUSP00000103613	TRANSLATION	protein_coding	-	CCDS71367.1	3	1314	0	0	0.5	151.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028619	Tceanc2	ENSMUST00000131474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028619	Tceanc2	ENSMUST00000147375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028619	Tceanc2	ENSMUST00000129220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028619	Tceanc2	ENSMUST00000141165	ENSMUSP00000115005	TRANSLATION	protein_coding	stop	-	5	179	0	1.2	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028619	Tceanc2	ENSMUST00000058585	ENSMUSP00000054142	TRANSLATION	protein_coding	-	CCDS18431.1	5	207	0	1.2	8.8	46.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028619	Tceanc2	ENSMUST00000030362	ENSMUSP00000030362	TRANSLATION	protein_coding	-	CCDS18431.1	3	207	0	1.2	8.8	46.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028619	Tceanc2	ENSMUST00000127720	ENSMUSP00000116632	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028619	Tceanc2	ENSMUST00000132526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028619	Tceanc2	ENSMUST00000057043	ENSMUSP00000059741	TRANSLATION	protein_coding	-	CCDS18431.1	1	207	0	1.2	8.8	46.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029073	Cptp	ENSMUST00000030950	ENSMUSP00000030950	TRANSLATION	protein_coding	-	CCDS19047.1	1	216	0	2	8.8	149.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029073	Cptp	ENSMUST00000151961	ENSMUSP00000115935	TRANSLATION	protein_coding	stop	-	2	214	0	2	8.8	149.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029073	Cptp	ENSMUST00000156266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028466	Creb3	ENSMUST00000132631	ENSMUSP00000123831	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028466	Creb3	ENSMUST00000167751	ENSMUSP00000129401	TRANSLATION	protein_coding	-	-	5	403	0	0	0	41.7	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028466	Creb3	ENSMUST00000138623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028466	Creb3	ENSMUST00000102944	ENSMUSP00000100008	TRANSLATION	protein_coding	-	CCDS18102.1	1	379	0	0	1.5	41.7	1	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000028466	Creb3	ENSMUST00000126277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028466	Creb3	ENSMUST00000159923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006398	Cdc20	ENSMUST00000151302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006398	Cdc20	ENSMUST00000183942	ENSMUSP00000139345	TRANSLATION	nonsense_mediated_decay	start	-	3	197	0	3.75	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006398	Cdc20	ENSMUST00000006565	ENSMUSP00000006565	TRANSLATION	protein_coding	-	CCDS18551.1	1	499	0	10.41	7.5	108.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040659	Efhd2	ENSMUST00000036854	ENSMUSP00000044502	TRANSLATION	protein_coding	-	CCDS18885.1	1	240	7	2.8	6.3	32.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028232	Tmem68	ENSMUST00000134451	ENSMUSP00000121921	TRANSLATION	protein_coding	stop	-	5	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028232	Tmem68	ENSMUST00000029891	ENSMUSP00000029891	TRANSLATION	protein_coding	-	CCDS17937.1	1	329	0	0	5.2	34.8	1	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000028232	Tmem68	ENSMUST00000142503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028232	Tmem68	ENSMUST00000154922	ENSMUSP00000123591	TRANSLATION	nonsense_mediated_decay	-	-	1	170	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000028232	Tmem68	ENSMUST00000150676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028232	Tmem68	ENSMUST00000134806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042558	Adprhl2	ENSMUST00000102617	ENSMUSP00000099677	TRANSLATION	protein_coding	-	CCDS18650.1	1	370	7	6	0.5	221.3	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000042558	Adprhl2	ENSMUST00000151191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042558	Adprhl2	ENSMUST00000128188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042558	Adprhl2	ENSMUST00000133068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028593	Aadacl4fm1	ENSMUST00000030328	ENSMUSP00000030328	TRANSLATION	protein_coding	-	CCDS51366.1	1	407	4	1.59	0.5	0	0	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000028364	Tnc	ENSMUST00000030056	ENSMUSP00000030056	TRANSLATION	protein_coding	-	CCDS18265.1	1	2019	3	13.98	2.7	1064.5	0	0,-4	-	-	13.606	MINOR
ENSMUSG00000028364	Tnc	ENSMUST00000107377	ENSMUSP00000103000	TRANSLATION	protein_coding	-	CCDS18265.1	1	2019	3	13.98	2.7	1064.5	0	0,-4	-	-	13.606	MINOR
ENSMUSG00000028364	Tnc	ENSMUST00000107372	ENSMUSP00000102995	TRANSLATION	protein_coding	-	-	5	2110	3	13.98	3.9	1097.5	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000028364	Tnc	ENSMUST00000107371	ENSMUSP00000102994	TRANSLATION	protein_coding	-	-	5	832	0	2.36	0	306.1	0	0,-4	-	-	0	MINOR
ENSMUSG00000029038	Ssu72	ENSMUST00000030905	ENSMUSP00000030905	TRANSLATION	protein_coding	-	CCDS19036.1	1	194	0	4.75	18.3	311.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000029038	Ssu72	ENSMUST00000140322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029038	Ssu72	ENSMUST00000105595	ENSMUSP00000101220	TRANSLATION	protein_coding	-	-	1	182	0	3.75	0	275.8	0	-4,-2	-	-	7.86	MINOR
ENSMUSG00000059713	Rcan3	ENSMUST00000156635	ENSMUSP00000118447	TRANSLATION	protein_coding	stop	-	5	159	0	1.64	0	137.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059713	Rcan3	ENSMUST00000132654	ENSMUSP00000114220	TRANSLATION	protein_coding	start	-	3	137	0	1.64	0	168	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059713	Rcan3	ENSMUST00000030606	ENSMUSP00000030606	TRANSLATION	protein_coding	-	CCDS18785.1	1	239	0	1.64	6.3	214.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039693	Msantd3	ENSMUST00000107704	ENSMUSP00000103332	TRANSLATION	protein_coding	-	CCDS18167.1	1	275	0	0	14.8	81.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000039693	Msantd3	ENSMUST00000061135	ENSMUSP00000056551	TRANSLATION	protein_coding	-	CCDS18167.1	1	275	0	0	14.8	81.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000039693	Msantd3	ENSMUST00000146240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039693	Msantd3	ENSMUST00000132360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039693	Msantd3	ENSMUST00000064807	ENSMUSP00000065785	TRANSLATION	protein_coding	-	CCDS18167.1	1	275	0	0	14.8	81.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000066071	Cyp4a12a	ENSMUST00000084343	ENSMUSP00000081370	TRANSLATION	protein_coding	-	CCDS18489.1	1	508	30	9.72	1.5	435.7	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000099545	Gm13276	ENSMUST00000179372	ENSMUSP00000140435	TRANSLATION	protein_coding	-	CCDS51225.1	-	182	0	0.48	0.5	95.8	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028886	Eya3	ENSMUST00000142998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000180250	ENSMUSP00000136812	TRANSLATION	protein_coding	-	CCDS18731.1	5	416	4	7.65	0.5	0	0	-4,-5	-	-	10	MINOR
ENSMUSG00000028886	Eya3	ENSMUST00000134868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000153809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000081726	ENSMUSP00000080425	TRANSLATION	protein_coding	-	CCDS18729.1	1	526	4	7.65	6.3	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028886	Eya3	ENSMUST00000142301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000130833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000145668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000135299	ENSMUSP00000123045	TRANSLATION	protein_coding	stop	-	5	302	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028886	Eya3	ENSMUST00000127682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000157029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028886	Eya3	ENSMUST00000020197	ENSMUSP00000020197	TRANSLATION	protein_coding	-	CCDS18731.1	5	416	4	7.65	0.5	0	0	-4,-5	-	-	10	MINOR
ENSMUSG00000028886	Eya3	ENSMUST00000079157	ENSMUSP00000078157	TRANSLATION	protein_coding	-	CCDS18730.1	1	510	4	7.65	1.5	0	0	-4,-5	-	-	10.188	MINOR
ENSMUSG00000028923	Necap2	ENSMUST00000149178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000153721	ENSMUSP00000121918	TRANSLATION	nonsense_mediated_decay	start	-	5	77	0	1.28	0	81.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028923	Necap2	ENSMUST00000132704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000145621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000122933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000132906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028923	Necap2	ENSMUST00000130351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000152915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028923	Necap2	ENSMUST00000030760	ENSMUSP00000030760	TRANSLATION	protein_coding	-	CCDS18862.1	1	266	0	4.03	5.1	193	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028923	Necap2	ENSMUST00000144813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028923	Necap2	ENSMUST00000150330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028896	Rcc1	ENSMUST00000156710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028896	Rcc1	ENSMUST00000105951	ENSMUSP00000101571	TRANSLATION	protein_coding	-	CCDS18723.1	5	421	0	9.75	7.5	288.5	0	-4,-6	-	-	14.202	PRINCIPAL:1
ENSMUSG00000028896	Rcc1	ENSMUST00000131307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028896	Rcc1	ENSMUST00000084250	ENSMUSP00000081271	TRANSLATION	protein_coding	-	CCDS18723.1	1	421	0	9.75	7.5	288.5	0	-4,-6	-	-	14.202	PRINCIPAL:1
ENSMUSG00000028896	Rcc1	ENSMUST00000155129	ENSMUSP00000120701	TRANSLATION	protein_coding	stop	-	5	116	0	2.5	0	72	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028896	Rcc1	ENSMUST00000137238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028896	Rcc1	ENSMUST00000155194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028896	Rcc1	ENSMUST00000030726	ENSMUSP00000030726	TRANSLATION	protein_coding	-	CCDS57303.1	1	434	0	10.15	2.7	288.5	0	-4,-5	-	-	12.786	MINOR
ENSMUSG00000036622	Atp13a2	ENSMUST00000137630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036622	Atp13a2	ENSMUST00000125797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036622	Atp13a2	ENSMUST00000168047	ENSMUSP00000126461	TRANSLATION	protein_coding	stop	-	1	970	6	8.46	0	237.4	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000036622	Atp13a2	ENSMUST00000135117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036622	Atp13a2	ENSMUST00000127833	ENSMUSP00000132183	TRANSLATION	protein_coding	-	CCDS51345.1	1	1115	6	9.75	1.5	249.3	7	-4,-5	-	-	17.976	ALTERNATIVE:2
ENSMUSG00000036622	Atp13a2	ENSMUST00000156995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036622	Atp13a2	ENSMUST00000151517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036622	Atp13a2	ENSMUST00000170797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036622	Atp13a2	ENSMUST00000037055	ENSMUSP00000039648	TRANSLATION	protein_coding	-	CCDS18859.1	1	1169	6	9.75	1.5	249.7	9	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000043385	Olfr267	ENSMUST00000059608	ENSMUSP00000062002	TRANSLATION	protein_coding	-	CCDS18213.1	-	313	0	0.42	3.9	170.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000043385	Olfr267	ENSMUST00000216719	ENSMUSP00000150848	TRANSLATION	protein_coding	-	CCDS18213.1	5	313	0	0.42	3.9	170.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000023571	C1qtnf12	ENSMUST00000024338	ENSMUSP00000024338	TRANSLATION	protein_coding	-	CCDS19052.1	1	308	0	0	0.5	0	0	3,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000023571	C1qtnf12	ENSMUST00000149558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023571	C1qtnf12	ENSMUST00000127222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007880	Arid1a	ENSMUST00000105897	ENSMUSP00000101517	TRANSLATION	protein_coding	-	CCDS38908.1	5	2283	0	2	0.5	424	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000007880	Arid1a	ENSMUST00000139709	ENSMUSP00000131950	TRANSLATION	protein_coding	stop	-	2	140	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007880	Arid1a	ENSMUST00000145664	ENSMUSP00000122354	TRANSLATION	protein_coding	-	-	2	2287	0	2	0.5	424	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000007880	Arid1a	ENSMUST00000008024	ENSMUSP00000008024	TRANSLATION	protein_coding	-	-	1	1902	0	2	0.5	424	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000007880	Arid1a	ENSMUST00000168582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007880	Arid1a	ENSMUST00000138473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045589	Frrs1l	ENSMUST00000053681	ENSMUSP00000052507	TRANSLATION	protein_coding	-	CCDS51179.1	1	293	0	0	0.5	86.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000045589	Frrs1l	ENSMUST00000128276	ENSMUSP00000121657	TRANSLATION	nonsense_mediated_decay	start	-	1	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045573	Penk	ENSMUST00000070375	ENSMUSP00000066822	TRANSLATION	protein_coding	-	CCDS17946.1	1	268	0	0	1.5	61	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045573	Penk	ENSMUST00000133567	ENSMUSP00000122389	TRANSLATION	protein_coding	stop	-	3	178	0	0	0	61	0	4,-1	-	-	-1	MINOR
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000030152	ENSMUSP00000030152	TRANSLATION	protein_coding	-	CCDS38717.1	5	260	0	0	2.7	510.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000138217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000123865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000123356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000095126	ENSMUSP00000092744	TRANSLATION	protein_coding	-	CCDS57265.1	3	202	0	0	0.5	299.8	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000125303	ENSMUSP00000122537	TRANSLATION	protein_coding	start	-	3	215	0	0	0	279.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000134546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028441	1110017D15Rik	ENSMUST00000124019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000135362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028453	Fancg	ENSMUST00000134083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000124645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000148018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028453	Fancg	ENSMUST00000132273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000125570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000133915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028453	Fancg	ENSMUST00000123332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028453	Fancg	ENSMUST00000127067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028453	Fancg	ENSMUST00000030165	ENSMUSP00000030165	TRANSLATION	protein_coding	-	CCDS18087.1	1	623	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000060572	Mfap2	ENSMUST00000071977	ENSMUSP00000071868	TRANSLATION	protein_coding	-	CCDS18860.2	1	185	0	0	2.7	147.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060572	Mfap2	ENSMUST00000166376	ENSMUSP00000132711	TRANSLATION	protein_coding	-	CCDS18860.2	2	185	0	0	2.7	147.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060572	Mfap2	ENSMUST00000124506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066154	Mup3	ENSMUST00000084531	ENSMUSP00000081579	TRANSLATION	protein_coding	-	CCDS18234.1	1	184	0	4.88	0.5	122.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000066154	Mup3	ENSMUST00000107472	ENSMUSP00000103096	TRANSLATION	protein_coding	-	CCDS18234.1	1	184	0	4.88	0.5	122.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000066154	Mup3	ENSMUST00000107488	ENSMUSP00000103112	TRANSLATION	protein_coding	-	CCDS18234.1	1	184	0	4.88	0.5	122.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000028699	Tspan1	ENSMUST00000030465	ENSMUSP00000030465	TRANSLATION	protein_coding	-	CCDS18508.1	1	240	0	3.06	6.3	172.9	4	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000028699	Tspan1	ENSMUST00000143426	ENSMUSP00000121906	TRANSLATION	protein_coding	stop	-	3	224	0	2.7	0	162.1	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000028699	Tspan1	ENSMUST00000154534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028688	Toe1	ENSMUST00000154945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028688	Toe1	ENSMUST00000146246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028688	Toe1	ENSMUST00000154195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028688	Toe1	ENSMUST00000149895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028688	Toe1	ENSMUST00000134612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028688	Toe1	ENSMUST00000030451	ENSMUSP00000030451	TRANSLATION	protein_coding	-	CCDS18517.1	1	511	0	1.93	0.5	315.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028688	Toe1	ENSMUST00000106455	ENSMUSP00000102063	TRANSLATION	protein_coding	-	-	1	329	0	1.93	0	268.6	0	-4,-5	-	-	9.204	MINOR
ENSMUSG00000028688	Toe1	ENSMUST00000145468	ENSMUSP00000117019	TRANSLATION	nonsense_mediated_decay	start	-	3	188	0	0.93	0	212.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028713	Cyp4b1	ENSMUST00000102707	ENSMUSP00000099768	TRANSLATION	protein_coding	-	CCDS18493.1	1	511	30	12.1	2.7	432	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028713	Cyp4b1	ENSMUST00000145841	ENSMUSP00000118323	TRANSLATION	protein_coding	start/stop	-	5	375	22	9.71	0	332.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028713	Cyp4b1	ENSMUST00000143237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028713	Cyp4b1	ENSMUST00000135569	ENSMUSP00000142279	TRANSLATION	nonsense_mediated_decay	start	-	1	208	11	5	0	152.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078506	Aadacl4fm2	ENSMUST00000105748	ENSMUSP00000101374	TRANSLATION	protein_coding	-	CCDS38955.1	5	406	3	1.44	0.5	0	0	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028277	Ube2j1	ENSMUST00000135924	ENSMUSP00000115757	TRANSLATION	protein_coding	start	-	2	262	0	3.28	0	60.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000028277	Ube2j1	ENSMUST00000029944	ENSMUSP00000029944	TRANSLATION	protein_coding	stop	-	5	157	0	1.88	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028277	Ube2j1	ENSMUST00000124992	ENSMUSP00000118333	TRANSLATION	protein_coding	-	CCDS18019.1	1	318	0	3.841	6.3	64.3	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000078510	Gm13101	ENSMUST00000105763	ENSMUSP00000101389	TRANSLATION	protein_coding	-	-	1	481	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000051056	Gja10	ENSMUST00000056517	ENSMUSP00000061742	TRANSLATION	protein_coding	-	CCDS18015.1	-	505	0	0.48	1.5	318	5	-3,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000051056	Gja10	ENSMUST00000219644	ENSMUSP00000151323	TRANSLATION	protein_coding	-	-	5	492	0	0.48	1	318	5	-3,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000095935	Gm11238	ENSMUST00000084479	ENSMUSP00000081519	TRANSLATION	protein_coding	-	-	5	360	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028396	2310002L09Rik	ENSMUST00000149981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028396	2310002L09Rik	ENSMUST00000095023	ENSMUSP00000092633	TRANSLATION	protein_coding	-	CCDS51211.1	1	217	0	0	1.5	0	1	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000028396	2310002L09Rik	ENSMUST00000030101	ENSMUSP00000030101	TRANSLATION	protein_coding	-	CCDS18285.1	1	200	0	0	1.5	0	1	-4,0	-	-	0	PRINCIPAL:3
ENSMUSG00000006221	Hspb7	ENSMUST00000102486	ENSMUSP00000099544	TRANSLATION	protein_coding	-	CCDS18873.1	1	169	0	1.2	3.9	51.7	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000049214	Skint7	ENSMUST00000142162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049214	Skint7	ENSMUST00000055014	ENSMUSP00000054822	TRANSLATION	protein_coding	-	CCDS18475.1	1	252	0	1.95	0.5	39.5	0	-2,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000049214	Skint7	ENSMUST00000106568	ENSMUSP00000102178	TRANSLATION	protein_coding	-	-	1	314	0	1.95	0	39.5	3	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000049214	Skint7	ENSMUST00000163281	ENSMUSP00000127347	TRANSLATION	protein_coding	-	CCDS51266.1	1	395	0	1.95	0.5	39.5	4	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000057977	Skint11	ENSMUST00000151810	ENSMUSP00000119157	TRANSLATION	protein_coding	stop	-	5	184	0	0.6	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000057977	Skint11	ENSMUST00000079915	ENSMUSP00000078836	TRANSLATION	protein_coding	-	CCDS51271.1	1	173	0	0.15	0.5	0	3	-2,-5	-	-	1.2	MINOR
ENSMUSG00000057977	Skint11	ENSMUST00000164297	ENSMUSP00000127138	TRANSLATION	protein_coding	-	CCDS51270.1	1	364	0	0.75	0.5	0	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000057977	Skint11	ENSMUST00000145797	ENSMUSP00000118895	TRANSLATION	protein_coding	stop	-	5	189	0	0.75	0	0	1	1,-3	-	-	-1	MINOR
ENSMUSG00000042357	Gjb5	ENSMUST00000046498	ENSMUSP00000045325	TRANSLATION	protein_coding	-	CCDS18670.1	1	271	0	0.8	1.5	257.4	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036241	Ube2r2	ENSMUST00000129874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036241	Ube2r2	ENSMUST00000123642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036241	Ube2r2	ENSMUST00000040008	ENSMUSP00000038813	TRANSLATION	protein_coding	-	CCDS18057.1	1	238	0	4.15	15	150.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078599	Skint8	ENSMUST00000124862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078599	Skint8	ENSMUST00000147395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078599	Skint8	ENSMUST00000165046	ENSMUSP00000133268	TRANSLATION	protein_coding	-	CCDS51265.1	1	398	0	1.75	0.5	36.8	3	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000078599	Skint8	ENSMUST00000129547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078599	Skint8	ENSMUST00000106572	ENSMUSP00000102182	TRANSLATION	protein_coding	-	-	5	318	0	1.75	0	36.8	2	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000039270	Megf9	ENSMUST00000037881	ENSMUSP00000040801	TRANSLATION	nonsense_mediated_decay	-	-	3	295	0	0.2	0	40.2	0	1,-2	-	-	-1	MINOR
ENSMUSG00000039270	Megf9	ENSMUST00000107359	ENSMUSP00000102982	TRANSLATION	protein_coding	-	CCDS18273.1	1	600	0	2.18	1.5	155.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000070806	Zmynd12	ENSMUST00000134147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070806	Zmynd12	ENSMUST00000129150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070806	Zmynd12	ENSMUST00000094819	ENSMUSP00000092414	TRANSLATION	protein_coding	-	CCDS18582.1	1	363	7	0	2.7	32.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066113	Adamtsl1	ENSMUST00000107178	ENSMUSP00000102796	TRANSLATION	protein_coding	-	CCDS51217.1	5	1753	3	8.9	0.5	405.6	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000066113	Adamtsl1	ENSMUST00000141889	ENSMUSP00000119278	TRANSLATION	protein_coding	-	-	5	1745	3	8.15	0	379.4	0	2,-2	-	-	11.928	MINOR
ENSMUSG00000066113	Adamtsl1	ENSMUST00000213098	ENSMUSP00000148689	TRANSLATION	protein_coding	stop	-	5	127	2	0.98	0	28.9	0	0,-5	-	-	-1	MINOR
ENSMUSG00000066113	Adamtsl1	ENSMUST00000136418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066113	Adamtsl1	ENSMUST00000048885	ENSMUSP00000043073	TRANSLATION	protein_coding	-	-	5	525	3	3.41	1.2	101.3	0	2,-2	-	-	3	MINOR
ENSMUSG00000066113	Adamtsl1	ENSMUST00000150043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066113	Adamtsl1	ENSMUST00000126654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066113	Adamtsl1	ENSMUST00000120678	ENSMUSP00000113330	TRANSLATION	protein_coding	-	-	1	203	3	2.36	0	28.9	0	2,-2	-	-	3	MINOR
ENSMUSG00000066113	Adamtsl1	ENSMUST00000130474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066113	Adamtsl1	ENSMUST00000147066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066113	Adamtsl1	ENSMUST00000107177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066113	Adamtsl1	ENSMUST00000136320	ENSMUSP00000123343	TRANSLATION	protein_coding	start/stop	-	3	243	0	1.49	0	48	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028826	Maco1	ENSMUST00000150031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028826	Maco1	ENSMUST00000137707	ENSMUSP00000124477	TRANSLATION	nonsense_mediated_decay	-	-	1	157	0	0	0	375.2	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000028826	Maco1	ENSMUST00000030628	ENSMUSP00000030628	TRANSLATION	protein_coding	-	CCDS18777.1	1	664	0	0	13.5	1115.1	6	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000028826	Maco1	ENSMUST00000148595	ENSMUSP00000125440	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	0	0	158.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000028826	Maco1	ENSMUST00000136113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070691	Runx3	ENSMUST00000156478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070691	Runx3	ENSMUST00000137027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070691	Runx3	ENSMUST00000056977	ENSMUSP00000050353	TRANSLATION	protein_coding	-	CCDS18782.1	1	423	0	3.56	0.5	373.1	0	-4,-5	-	-	11.34	PRINCIPAL:2
ENSMUSG00000070691	Runx3	ENSMUST00000127109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070691	Runx3	ENSMUST00000140642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070691	Runx3	ENSMUST00000119564	ENSMUSP00000113159	TRANSLATION	protein_coding	-	-	1	409	0	3.89	1	373.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000063077	Kif1b	ENSMUST00000139123	ENSMUSP00000120076	TRANSLATION	protein_coding	start	-	1	495	0	0	0	118.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063077	Kif1b	ENSMUST00000030806	ENSMUSP00000030806	TRANSLATION	protein_coding	-	CCDS18957.1	1	1150	11	14.5	5.3	630.9	0	-4,-2	-	-	12.858	MINOR
ENSMUSG00000063077	Kif1b	ENSMUST00000150230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000154411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000055647	ENSMUSP00000061472	TRANSLATION	protein_coding	-	CCDS18956.1	1	1770	11	14.5	9.3	854.4	0	-4,-2	-	-	16.092	MINOR
ENSMUSG00000063077	Kif1b	ENSMUST00000123593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000132072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000150853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000140749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000133526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063077	Kif1b	ENSMUST00000238956	ENSMUSP00000158941	TRANSLATION	protein_coding	-	-	-	1883	11	14.764	0	922	0	-4,-2	-	-	18	MINOR
ENSMUSG00000063077	Kif1b	ENSMUST00000060537	ENSMUSP00000056754	TRANSLATION	protein_coding	-	CCDS71521.1	1	1816	11	14.764	10.3	922	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000028653	Trit1	ENSMUST00000147165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028653	Trit1	ENSMUST00000102649	ENSMUSP00000099709	TRANSLATION	protein_coding	-	CCDS18607.1	1	467	5	6.62	6.3	246.3	0	-1,3	-	-	19	PRINCIPAL:1
ENSMUSG00000028653	Trit1	ENSMUST00000141855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029003	Mad2l2	ENSMUST00000132698	ENSMUSP00000122774	TRANSLATION	protein_coding	stop	-	5	173	0	5.66	0	37.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029003	Mad2l2	ENSMUST00000030860	ENSMUSP00000030860	TRANSLATION	protein_coding	-	CCDS18932.1	1	211	0	6.99	16.3	36.6	0	-4,-7	-	-	15.838	PRINCIPAL:1
ENSMUSG00000029003	Mad2l2	ENSMUST00000126261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029003	Mad2l2	ENSMUST00000105708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029003	Mad2l2	ENSMUST00000140049	ENSMUSP00000120481	TRANSLATION	protein_coding	stop	-	3	106	0	3.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029003	Mad2l2	ENSMUST00000148742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029003	Mad2l2	ENSMUST00000105707	ENSMUSP00000101332	TRANSLATION	protein_coding	-	-	3	178	0	5.33	0.5	37.6	0	-4,-7	-	-	8.682	MINOR
ENSMUSG00000029003	Mad2l2	ENSMUST00000084129	ENSMUSP00000081146	TRANSLATION	protein_coding	-	CCDS18932.1	1	211	0	6.99	16.3	36.6	0	-4,-7	-	-	15.838	PRINCIPAL:1
ENSMUSG00000028700	Pomgnt1	ENSMUST00000147612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028700	Pomgnt1	ENSMUST00000106494	ENSMUSP00000102103	TRANSLATION	protein_coding	-	CCDS71450.1	1	638	10	16	2.7	253.1	1	-4,-7	-	-	18.786	MINOR
ENSMUSG00000028700	Pomgnt1	ENSMUST00000120083	ENSMUSP00000112751	TRANSLATION	protein_coding	-	CCDS18506.1	5	660	10	16	7.5	252.9	3	-4,-6	-	-	20.988	PRINCIPAL:1
ENSMUSG00000028700	Pomgnt1	ENSMUST00000155718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028700	Pomgnt1	ENSMUST00000133838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028700	Pomgnt1	ENSMUST00000136855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028700	Pomgnt1	ENSMUST00000106496	ENSMUSP00000102105	TRANSLATION	protein_coding	-	CCDS18507.1	1	627	10	15	0.5	253.1	3	-4,-6	-	-	16.002	MINOR
ENSMUSG00000028700	Pomgnt1	ENSMUST00000121052	ENSMUSP00000112911	TRANSLATION	protein_coding	-	CCDS18506.1	5	660	10	16	7.5	252.9	3	-4,-6	-	-	20.988	PRINCIPAL:1
ENSMUSG00000028700	Pomgnt1	ENSMUST00000106498	ENSMUSP00000102107	TRANSLATION	protein_coding	-	CCDS18506.1	1	660	10	16	7.5	252.9	3	-4,-6	-	-	20.988	PRINCIPAL:1
ENSMUSG00000028700	Pomgnt1	ENSMUST00000127426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028700	Pomgnt1	ENSMUST00000151325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028700	Pomgnt1	ENSMUST00000144311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043085	Tmem82	ENSMUST00000053263	ENSMUSP00000058412	TRANSLATION	protein_coding	-	CCDS18877.1	1	356	0	0	1.5	445	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043085	Tmem82	ENSMUST00000156246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043085	Tmem82	ENSMUST00000143154	ENSMUSP00000120973	TRANSLATION	nonsense_mediated_decay	-	-	1	270	0	0	0	360.3	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000028423	Nfx1	ENSMUST00000091614	ENSMUSP00000089203	TRANSLATION	protein_coding	-	CCDS71359.1	1	804	9	0	0.5	114.1	0	-4,-5	-	-	6.348	MINOR
ENSMUSG00000028423	Nfx1	ENSMUST00000131305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028423	Nfx1	ENSMUST00000143798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028423	Nfx1	ENSMUST00000030133	ENSMUSP00000030133	TRANSLATION	protein_coding	-	CCDS71360.1	1	818	9	0	1.5	114.1	0	-4,-5	-	-	6.348	MINOR
ENSMUSG00000028423	Nfx1	ENSMUST00000124595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028423	Nfx1	ENSMUST00000136717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028423	Nfx1	ENSMUST00000098143	ENSMUSP00000095747	TRANSLATION	protein_coding	-	CCDS18054.1	1	1114	9	0	1.5	208.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057375	Yipf1	ENSMUST00000143106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000146829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000139527	ENSMUSP00000115626	TRANSLATION	protein_coding	stop	-	5	269	1	0	0	75.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000057375	Yipf1	ENSMUST00000075693	ENSMUSP00000075113	TRANSLATION	protein_coding	-	CCDS18437.1	1	306	1	0	1.5	80.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057375	Yipf1	ENSMUST00000140162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000124254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000128507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000137391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057375	Yipf1	ENSMUST00000124650	ENSMUSP00000119107	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057375	Yipf1	ENSMUST00000128284	ENSMUSP00000114898	TRANSLATION	protein_coding	stop	-	5	243	1	0	0	70.5	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000057375	Yipf1	ENSMUST00000155975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029068	Ccnl2	ENSMUST00000126346	ENSMUSP00000116000	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	1.685	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029068	Ccnl2	ENSMUST00000139066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029068	Ccnl2	ENSMUST00000129850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029068	Ccnl2	ENSMUST00000136370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029068	Ccnl2	ENSMUST00000030944	ENSMUSP00000030944	TRANSLATION	protein_coding	-	CCDS19042.1	1	518	0	4.645	0.5	62.8	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000023263	9530002B09Rik	ENSMUST00000024032	ENSMUSP00000024032	TRANSLATION	protein_coding	-	CCDS18603.1	1	135	0	1.36	0.5	23.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038024	Dennd4c	ENSMUST00000142837	ENSMUSP00000123367	TRANSLATION	protein_coding	-	CCDS51218.2	1	1906	4	2.16	0.5	313.3	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000038024	Dennd4c	ENSMUST00000045512	ENSMUSP00000039860	TRANSLATION	protein_coding	-	-	5	1615	4	2.16	0	313.3	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000038024	Dennd4c	ENSMUST00000128710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038024	Dennd4c	ENSMUST00000082026	ENSMUSP00000080685	TRANSLATION	protein_coding	-	-	5	1955	4	2.16	0.5	313.3	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000062545	Tlr12	ENSMUST00000074829	ENSMUSP00000074381	TRANSLATION	protein_coding	-	CCDS18673.1	-	906	0	0.28	1.5	113.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062545	Tlr12	ENSMUST00000133382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000137903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000037907	ENSMUSP00000042433	TRANSLATION	protein_coding	-	CCDS18043.1	1	926	21	17.98	0.5	424.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040296	Ddx58	ENSMUST00000139583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000127026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000139110	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000149539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000136435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000140616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040296	Ddx58	ENSMUST00000142055	ENSMUSP00000115052	TRANSLATION	protein_coding	stop	-	5	707	9	14.23	0	203.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040296	Ddx58	ENSMUST00000135966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034557	Zfyve9	ENSMUST00000106658	ENSMUSP00000102269	TRANSLATION	protein_coding	-	-	5	1338	8	12.5	0.5	649.4	0	-4,-5	-	-	11.724	MINOR
ENSMUSG00000034557	Zfyve9	ENSMUST00000042185	ENSMUSP00000039852	TRANSLATION	protein_coding	-	CCDS38834.1	1	706	4	13.566	1.7	653.6	0	-4,-7	-	-	11.106	MINOR
ENSMUSG00000034557	Zfyve9	ENSMUST00000106657	ENSMUSP00000102268	TRANSLATION	protein_coding	-	CCDS84772.1	5	1397	8	13.5	1.5	718.5	0	-4,-5	-	-	17.868	PRINCIPAL:1
ENSMUSG00000028952	Zbtb48	ENSMUST00000156748	ENSMUSP00000117079	TRANSLATION	nonsense_mediated_decay	start	-	3	164	8	1.75	0	18.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028952	Zbtb48	ENSMUST00000123696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028952	Zbtb48	ENSMUST00000147895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028952	Zbtb48	ENSMUST00000066715	ENSMUSP00000067521	TRANSLATION	protein_coding	-	CCDS38982.1	1	681	44	7.89	1.5	224.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028952	Zbtb48	ENSMUST00000131935	ENSMUSP00000116423	TRANSLATION	protein_coding	stop	-	3	193	0	1	0	80.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028952	Zbtb48	ENSMUST00000155389	ENSMUSP00000114726	TRANSLATION	nonsense_mediated_decay	-	-	2	547	16	4.35	0	133.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028952	Zbtb48	ENSMUST00000155441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028952	Zbtb48	ENSMUST00000136212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028475	Spaar	ENSMUST00000131248	ENSMUSP00000148128	TRANSLATION	protein_coding	-	-	1	75	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028475	Spaar	ENSMUST00000142309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028359	Orm3	ENSMUST00000006687	ENSMUSP00000006687	TRANSLATION	protein_coding	-	CCDS18252.1	5	206	0	4.4	0.5	82.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000035692	Isg15	ENSMUST00000085425	ENSMUSP00000082548	TRANSLATION	protein_coding	-	CCDS51405.1	1	161	0	1	0.5	126.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094116	Gm11237	ENSMUST00000178319	ENSMUSP00000137528	TRANSLATION	protein_coding	-	-	1	360	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000041193	Pla2g5	ENSMUST00000154844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041193	Pla2g5	ENSMUST00000140100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041193	Pla2g5	ENSMUST00000140117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041193	Pla2g5	ENSMUST00000127183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041193	Pla2g5	ENSMUST00000102513	ENSMUSP00000099571	TRANSLATION	protein_coding	-	CCDS18834.1	5	137	7	3.04	7.5	117.9	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000041193	Pla2g5	ENSMUST00000030524	ENSMUSP00000030524	TRANSLATION	protein_coding	-	CCDS18834.1	1	137	7	3.04	7.5	117.9	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000041193	Pla2g5	ENSMUST00000136393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041193	Pla2g5	ENSMUST00000102511	ENSMUSP00000099569	TRANSLATION	protein_coding	-	CCDS18834.1	1	137	7	3.04	7.5	117.9	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000041193	Pla2g5	ENSMUST00000102512	ENSMUSP00000099570	TRANSLATION	protein_coding	-	CCDS18834.1	1	137	7	3.04	7.5	117.9	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000047502	Mroh7	ENSMUST00000135000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047502	Mroh7	ENSMUST00000106770	ENSMUSP00000102382	TRANSLATION	protein_coding	-	CCDS51253.1	5	1279	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000047502	Mroh7	ENSMUST00000145044	ENSMUSP00000117581	TRANSLATION	protein_coding	stop	-	5	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047502	Mroh7	ENSMUST00000145374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047502	Mroh7	ENSMUST00000134160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047502	Mroh7	ENSMUST00000142954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047502	Mroh7	ENSMUST00000148281	ENSMUSP00000119211	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000120946	ENSMUSP00000113875	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000148723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028796	Phc2	ENSMUST00000155653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028796	Phc2	ENSMUST00000134421	ENSMUSP00000123307	TRANSLATION	protein_coding	stop	-	5	143	4	2.448	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000136377	ENSMUSP00000116333	TRANSLATION	protein_coding	stop	-	5	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000147572	ENSMUSP00000118298	TRANSLATION	protein_coding	stop	-	3	202	4	2.382	0	83.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000106080	ENSMUSP00000101690	TRANSLATION	protein_coding	-	CCDS18674.1	1	850	4	3.782	0.5	245	0	-4,-5	-	-	16	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000030588	ENSMUSP00000030588	TRANSLATION	protein_coding	-	CCDS18674.1	5	850	4	3.782	0.5	245	0	-4,-5	-	-	16	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000143632	ENSMUSP00000120468	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000138445	ENSMUSP00000117688	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000133439	ENSMUSP00000117163	TRANSLATION	protein_coding	stop	-	5	53	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028796	Phc2	ENSMUST00000106079	ENSMUSP00000101689	TRANSLATION	protein_coding	-	CCDS57297.1	1	323	4	3.782	8.8	245	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000107067	ENSMUSP00000102682	TRANSLATION	protein_coding	-	-	1	67	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000186369	ENSMUSP00000140103	TRANSLATION	protein_coding	start	-	5	101	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000147925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000147069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000148653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000107068	ENSMUSP00000102683	TRANSLATION	protein_coding	-	-	3	73	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000126721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000151946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048747	E130114P18Rik	ENSMUST00000146447	ENSMUSP00000121284	TRANSLATION	protein_coding	start	-	1	154	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000081225	Cyp2j12	ENSMUST00000121694	ENSMUSP00000134394	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0.6	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000081225	Cyp2j12	ENSMUST00000097972	ENSMUSP00000133811	TRANSLATION	protein_coding	-	CCDS57287.1	5	502	32	8.4	1.5	458.1	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028333	Anp32b	ENSMUST00000102926	ENSMUSP00000099990	TRANSLATION	protein_coding	-	CCDS18151.1	1	272	0	3.5	1.5	31.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094618	Gm13271	ENSMUST00000094992	ENSMUSP00000092600	TRANSLATION	protein_coding	-	CCDS38801.1	-	182	2	0.48	0.5	93.2	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000063245	Zfp993	ENSMUST00000070932	ENSMUSP00000065923	TRANSLATION	protein_coding	stop	-	3	129	0	1	0	70.3	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000063245	Zfp993	ENSMUST00000130825	ENSMUSP00000121301	TRANSLATION	protein_coding	stop	-	5	313	8	1.8	0	118.1	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000094686	Ccl21a	ENSMUST00000095114	ENSMUSP00000092732	TRANSLATION	protein_coding	-	CCDS18081.1	1	133	0	2.33	3.9	82.8	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000028251	Tstd3	ENSMUST00000029915	ENSMUSP00000029915	TRANSLATION	protein_coding	-	CCDS51128.1	1	157	7	1.69	1.5	50.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028974	Dffa	ENSMUST00000153781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028974	Dffa	ENSMUST00000030816	ENSMUSP00000030816	TRANSLATION	protein_coding	-	CCDS18951.1	1	331	0	4	3.9	327.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000028974	Dffa	ENSMUST00000103216	ENSMUSP00000099505	TRANSLATION	protein_coding	-	CCDS18952.1	1	265	0	3	1.5	326.7	0	-4,-6	-	-	10.144	MINOR
ENSMUSG00000044496	2510039O18Rik	ENSMUST00000103232	ENSMUSP00000099522	TRANSLATION	protein_coding	-	CCDS18925.1	1	634	0	0	6.3	823.9	0	0,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037348	Paqr7	ENSMUST00000134506	ENSMUSP00000120959	TRANSLATION	protein_coding	stop	-	3	127	0	0	0	41.8	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000037348	Paqr7	ENSMUST00000155449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037348	Paqr7	ENSMUST00000095074	ENSMUSP00000125932	TRANSLATION	protein_coding	-	CCDS18773.1	1	345	0	1.93	2.7	167.4	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037348	Paqr7	ENSMUST00000081525	ENSMUSP00000080240	TRANSLATION	protein_coding	-	CCDS18773.1	1	345	0	1.93	2.7	167.4	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037348	Paqr7	ENSMUST00000125330	ENSMUSP00000116485	TRANSLATION	protein_coding	stop	-	1	147	0	0.98	0	61.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000037348	Paqr7	ENSMUST00000136171	ENSMUSP00000122936	TRANSLATION	protein_coding	stop	-	1	237	0	1.23	0	110.3	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000028836	Slc30a2	ENSMUST00000105874	ENSMUSP00000101500	TRANSLATION	protein_coding	-	CCDS38915.1	1	371	0	0	1.5	166.6	9	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000028836	Slc30a2	ENSMUST00000081094	ENSMUSP00000079875	TRANSLATION	protein_coding	-	-	1	291	0	0	0.5	159.5	8	-4,-5	-	-	5.574	ALTERNATIVE:2
ENSMUSG00000028836	Slc30a2	ENSMUST00000105872	ENSMUSP00000101498	TRANSLATION	protein_coding	-	-	1	291	0	0	0.5	159.5	8	-4,-5	-	-	5.574	ALTERNATIVE:2
ENSMUSG00000028836	Slc30a2	ENSMUST00000105873	ENSMUSP00000101499	TRANSLATION	protein_coding	-	-	5	322	0	0	0	90.8	7	-4,-7	-	-	1.452	MINOR
ENSMUSG00000055401	Fbxo6	ENSMUST00000168503	ENSMUSP00000130188	TRANSLATION	protein_coding	-	CCDS18933.1	2	295	2	6.43	0.5	293.5	0	-4,-6	-	-	14.001	PRINCIPAL:1
ENSMUSG00000055401	Fbxo6	ENSMUST00000105706	ENSMUSP00000101331	TRANSLATION	protein_coding	-	CCDS18933.1	1	295	2	6.43	0.5	293.5	0	-4,-6	-	-	14.001	PRINCIPAL:1
ENSMUSG00000055401	Fbxo6	ENSMUST00000030858	ENSMUSP00000030858	TRANSLATION	protein_coding	-	CCDS18933.1	1	295	2	6.43	0.5	293.5	0	-4,-6	-	-	14.001	PRINCIPAL:1
ENSMUSG00000055401	Fbxo6	ENSMUST00000152098	ENSMUSP00000121379	TRANSLATION	protein_coding	stop	-	2	265	2	6.43	2.4	293.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055401	Fbxo6	ENSMUST00000132083	ENSMUSP00000120431	TRANSLATION	protein_coding	stop	-	3	64	0	1	0	41.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055401	Fbxo6	ENSMUST00000134261	ENSMUSP00000123132	TRANSLATION	protein_coding	stop	-	5	228	2	5.5	0	254.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055401	Fbxo6	ENSMUST00000056965	ENSMUSP00000062348	TRANSLATION	protein_coding	-	CCDS18933.1	1	295	2	6.43	0.5	293.5	0	-4,-6	-	-	14.001	PRINCIPAL:1
ENSMUSG00000055401	Fbxo6	ENSMUST00000126615	ENSMUSP00000120801	TRANSLATION	protein_coding	stop	-	2	237	3	5.83	0	276.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073769	Olfr1331	ENSMUST00000094831	ENSMUSP00000092426	TRANSLATION	protein_coding	-	CCDS18564.1	-	317	0	0.36	0.5	180	6	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000073769	Olfr1331	ENSMUST00000216589	ENSMUSP00000154685	TRANSLATION	protein_coding	-	-	5	316	0	0.36	0.5	180	6	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000073769	Olfr1331	ENSMUST00000106360	ENSMUSP00000101967	TRANSLATION	protein_coding	-	CCDS18564.1	5	317	0	0.36	0.5	180	6	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000028415	Spink4	ENSMUST00000030122	ENSMUSP00000030122	TRANSLATION	protein_coding	-	CCDS18052.1	1	86	0	1.9	5.1	51.5	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028415	Spink4	ENSMUST00000132943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000072554	ENSMUSP00000072366	TRANSLATION	protein_coding	-	CCDS19059.1	1	199	0	0	2.7	301.2	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000141802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000127332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000154944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000169550	ENSMUSP00000131817	TRANSLATION	protein_coding	-	CCDS19059.1	5	199	0	0	2.7	301.2	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000125786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000105576	ENSMUSP00000101201	TRANSLATION	protein_coding	-	-	1	167	0	0	0	226.2	1	3,-2	-	-	1.5	MINOR
ENSMUSG00000059939	9430015G10Rik	ENSMUST00000141882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096682	Ifna5	ENSMUST00000102804	ENSMUSP00000099868	TRANSLATION	protein_coding	-	CCDS18345.1	-	189	3	1	1.5	210.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000087198	Tmem274	ENSMUST00000229840	ENSMUSP00000155262	TRANSLATION	nonsense_mediated_decay	-	-	-	73	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000087198	Tmem274	ENSMUST00000210722	ENSMUSP00000154867	TRANSLATION	protein_coding	-	-	-	162	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000066007	Zfp600	ENSMUST00000131932	ENSMUSP00000117892	TRANSLATION	protein_coding	stop	-	3	135	0	1	0	71.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000066007	Zfp600	ENSMUST00000151278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066007	Zfp600	ENSMUST00000168483	ENSMUSP00000126879	TRANSLATION	protein_coding	-	CCDS51373.1	2	737	68	1.4	0.5	462.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000066007	Zfp600	ENSMUST00000092750	ENSMUSP00000090425	TRANSLATION	protein_coding	-	CCDS51373.1	1	737	68	1.4	0.5	462.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051351	Zfp46	ENSMUST00000144217	ENSMUSP00000118495	TRANSLATION	protein_coding	stop	-	2	157	6	1.35	0	93.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051351	Zfp46	ENSMUST00000069195	ENSMUSP00000070216	TRANSLATION	protein_coding	-	CCDS18804.1	1	452	48	2.15	7.5	381.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000051351	Zfp46	ENSMUST00000130658	ENSMUSP00000116237	TRANSLATION	protein_coding	stop	-	2	130	2	0	0	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051351	Zfp46	ENSMUST00000132649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051351	Zfp46	ENSMUST00000130223	ENSMUSP00000115774	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028784	Spocd1	ENSMUST00000084263	ENSMUSP00000081284	TRANSLATION	protein_coding	-	-	5	936	0	2.26	0	177.1	0	-4,-5	-	-	11.304	PRINCIPAL:1
ENSMUSG00000028784	Spocd1	ENSMUST00000128007	ENSMUSP00000118383	TRANSLATION	protein_coding	stop	-	5	158	0	2.558	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108398	Gm30191	ENSMUST00000205501	ENSMUSP00000145697	TRANSLATION	protein_coding	-	-	5	187	7	0	0	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028996	Rbp7	ENSMUST00000030848	ENSMUSP00000030848	TRANSLATION	protein_coding	-	CCDS18959.1	1	134	19	4	21.5	62.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028996	Rbp7	ENSMUST00000132103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028996	Rbp7	ENSMUST00000148596	ENSMUSP00000119166	TRANSLATION	nonsense_mediated_decay	start	-	3	68	3	1.882	0	21.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046133	C130073F10Rik	ENSMUST00000051043	ENSMUSP00000059092	TRANSLATION	protein_coding	-	-	1	201	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000095675	Ccl21b	ENSMUST00000178864	ENSMUSP00000137149	TRANSLATION	protein_coding	-	CCDS51145.1	1	133	0	2.33	3.9	83.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000028292	Rars2	ENSMUST00000149620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028292	Rars2	ENSMUST00000141519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028292	Rars2	ENSMUST00000142045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028292	Rars2	ENSMUST00000155133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028292	Rars2	ENSMUST00000136563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028292	Rars2	ENSMUST00000148519	ENSMUSP00000116173	TRANSLATION	protein_coding	stop	-	3	103	0	0.32	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028292	Rars2	ENSMUST00000029968	ENSMUSP00000029968	TRANSLATION	protein_coding	-	CCDS18029.1	1	578	10	11.16	7.6	396	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000040478	Prdm13	ENSMUST00000139255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040478	Prdm13	ENSMUST00000144160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040478	Prdm13	ENSMUST00000139568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040478	Prdm13	ENSMUST00000095141	ENSMUSP00000092761	TRANSLATION	protein_coding	-	CCDS38699.1	2	754	16	1.9	0.5	79.3	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000040478	Prdm13	ENSMUST00000149516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040478	Prdm13	ENSMUST00000076206	ENSMUSP00000075562	TRANSLATION	protein_coding	-	-	2	706	16	1.7	0	79.3	0	-4,-7	-	-	17.37	ALTERNATIVE:2
ENSMUSG00000028800	Hdac1	ENSMUST00000142984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028800	Hdac1	ENSMUST00000145628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028800	Hdac1	ENSMUST00000125718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028800	Hdac1	ENSMUST00000132909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028800	Hdac1	ENSMUST00000150105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028800	Hdac1	ENSMUST00000102597	ENSMUSP00000099657	TRANSLATION	protein_coding	-	CCDS18696.1	1	482	3	12.08	7.5	278.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028800	Hdac1	ENSMUST00000139305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028394	Pole3	ENSMUST00000129930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028394	Pole3	ENSMUST00000128100	ENSMUSP00000114486	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	1.5	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028394	Pole3	ENSMUST00000030091	ENSMUSP00000030091	TRANSLATION	protein_coding	-	CCDS18244.1	1	145	0	2.5	0.5	50.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028541	B4galt2	ENSMUST00000106421	ENSMUSP00000102029	TRANSLATION	protein_coding	-	CCDS18539.1	1	369	17	6.148	6.3	294.5	2	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028541	B4galt2	ENSMUST00000153358	ENSMUSP00000120571	TRANSLATION	protein_coding	stop	-	3	196	6	1.95	0	131.1	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000028541	B4galt2	ENSMUST00000137016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028541	B4galt2	ENSMUST00000171548	ENSMUSP00000126539	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000028541	B4galt2	ENSMUST00000030266	ENSMUSP00000030266	TRANSLATION	protein_coding	-	CCDS18539.1	1	369	17	6.148	6.3	294.5	2	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028541	B4galt2	ENSMUST00000167443	ENSMUSP00000128771	TRANSLATION	nonsense_mediated_decay	-	-	1	224	4	1.55	0	103.6	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000028541	B4galt2	ENSMUST00000084325	ENSMUSP00000081352	TRANSLATION	nonsense_mediated_decay	-	-	2	369	17	6.148	6.3	294.5	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000028834	Trim63	ENSMUST00000134164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028834	Trim63	ENSMUST00000105875	ENSMUSP00000101501	TRANSLATION	protein_coding	-	CCDS38914.1	5	355	15	3.1	1.5	68.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028834	Trim63	ENSMUST00000135576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028834	Trim63	ENSMUST00000030638	ENSMUSP00000030638	TRANSLATION	protein_coding	-	-	5	352	15	3.1	1	68.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028651	Ppie	ENSMUST00000030404	ENSMUSP00000030404	TRANSLATION	protein_coding	-	CCDS18610.1	1	301	8	7.66	17.5	229	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028651	Ppie	ENSMUST00000137778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028651	Ppie	ENSMUST00000136466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028651	Ppie	ENSMUST00000126558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044700	Tmem201	ENSMUST00000140889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044700	Tmem201	ENSMUST00000145405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044700	Tmem201	ENSMUST00000139923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044700	Tmem201	ENSMUST00000054459	ENSMUSP00000050481	TRANSLATION	protein_coding	-	-	2	634	4	0	0	430.5	7	-1,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000044700	Tmem201	ENSMUST00000105687	ENSMUSP00000101312	TRANSLATION	protein_coding	-	CCDS71523.1	1	664	4	0	2.7	430.5	7	-1,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000044700	Tmem201	ENSMUST00000103208	ENSMUSP00000099497	TRANSLATION	protein_coding	-	CCDS18965.1	1	392	4	0	2.9	429.7	7	-1,-6	-	-	9.952	PRINCIPAL:3
ENSMUSG00000054362	Lexm	ENSMUST00000106788	ENSMUSP00000102400	TRANSLATION	protein_coding	-	CCDS51252.1	1	414	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000054362	Lexm	ENSMUST00000067387	ENSMUSP00000066732	TRANSLATION	nonsense_mediated_decay	-	-	1	414	0	0	0.5	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054362	Lexm	ENSMUST00000126324	ENSMUSP00000118338	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054362	Lexm	ENSMUST00000189032	ENSMUSP00000139868	TRANSLATION	protein_coding	-	CCDS51252.1	1	414	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043962	Thrap3	ENSMUST00000163176	ENSMUSP00000129416	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	33.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000169855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043962	Thrap3	ENSMUST00000142125	ENSMUSP00000118414	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000130477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043962	Thrap3	ENSMUST00000130334	ENSMUSP00000120455	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000136157	ENSMUSP00000120140	TRANSLATION	protein_coding	stop	-	5	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000106141	ENSMUSP00000101747	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000124327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043962	Thrap3	ENSMUST00000123008	ENSMUSP00000131956	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000106142	ENSMUSP00000101748	TRANSLATION	protein_coding	-	-	1	709	0	0	0	571.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000154702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043962	Thrap3	ENSMUST00000080919	ENSMUSP00000079722	TRANSLATION	protein_coding	-	CCDS18645.1	1	951	0	0	1.5	705.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043962	Thrap3	ENSMUST00000140390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043962	Thrap3	ENSMUST00000163306	ENSMUSP00000126399	TRANSLATION	protein_coding	start/stop	-	3	135	0	0	0	170.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000151728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043962	Thrap3	ENSMUST00000163459	ENSMUSP00000129775	TRANSLATION	protein_coding	start/stop	-	5	194	0	0	0	83.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043962	Thrap3	ENSMUST00000168568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043962	Thrap3	ENSMUST00000169403	ENSMUSP00000125856	TRANSLATION	protein_coding	stop	-	3	50	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063376	Ifna13	ENSMUST00000105149	ENSMUSP00000100780	TRANSLATION	protein_coding	-	CCDS18324.1	-	189	3	1	3.9	214.6	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000035407	Kank4	ENSMUST00000102790	ENSMUSP00000099851	TRANSLATION	protein_coding	-	CCDS18379.1	1	1016	0	4.05	0.5	151.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035407	Kank4	ENSMUST00000137270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096930	Gm26657	ENSMUST00000181745	ENSMUSP00000137920	TRANSLATION	protein_coding	stop	-	-	127	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000023151	Lrrc69	ENSMUST00000023917	ENSMUSP00000023917	TRANSLATION	protein_coding	-	CCDS38696.1	1	347	2	5.01	2.9	104.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023151	Lrrc69	ENSMUST00000108276	ENSMUSP00000103911	TRANSLATION	protein_coding	-	CCDS38696.1	1	347	2	5.01	2.9	104.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023151	Lrrc69	ENSMUST00000143565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005045	Chd5	ENSMUST00000164662	ENSMUSP00000132600	TRANSLATION	protein_coding	-	CCDS51394.1	1	1915	7	17.4	0.5	1089.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000005045	Chd5	ENSMUST00000005175	ENSMUSP00000005175	TRANSLATION	protein_coding	-	-	5	1946	7	17.4	0.5	1089.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000005045	Chd5	ENSMUST00000030775	ENSMUSP00000030775	TRANSLATION	protein_coding	-	CCDS38984.1	5	1952	7	17.4	0.5	1089.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000005045	Chd5	ENSMUST00000124423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005045	Chd5	ENSMUST00000136134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042116	Vwa1	ENSMUST00000042196	ENSMUSP00000040405	TRANSLATION	protein_coding	-	CCDS19039.1	1	415	5	2.16	2.7	182.9	0	3,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000041399	1700013G24Rik	ENSMUST00000048893	ENSMUSP00000043461	TRANSLATION	protein_coding	-	CCDS18818.1	1	286	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000070891	Gm12689	ENSMUST00000094955	ENSMUSP00000092562	TRANSLATION	protein_coding	-	-	-	117	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028989	Angptl7	ENSMUST00000030840	ENSMUSP00000030840	TRANSLATION	protein_coding	-	CCDS18938.1	1	337	6	3.6	0.5	239.1	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028907	Utp11	ENSMUST00000153088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028907	Utp11	ENSMUST00000030738	ENSMUSP00000030738	TRANSLATION	protein_coding	-	CCDS18623.1	1	253	0	0	8.5	246.6	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028618	Tmem59	ENSMUST00000141013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028618	Tmem59	ENSMUST00000154007	ENSMUSP00000119701	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000028618	Tmem59	ENSMUST00000128123	ENSMUSP00000120288	TRANSLATION	protein_coding	stop	-	5	127	0	0	0	183.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028618	Tmem59	ENSMUST00000030361	ENSMUSP00000030361	TRANSLATION	protein_coding	-	CCDS18432.1	1	323	0	0	7.5	233.5	1	1,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000028618	Tmem59	ENSMUST00000127652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028618	Tmem59	ENSMUST00000106753	ENSMUSP00000102364	TRANSLATION	protein_coding	-	-	5	256	0	0	1.2	134.7	1	1,-2	-	-	0.165	MINOR
ENSMUSG00000056494	Cngb3	ENSMUST00000102999	ENSMUSP00000100064	TRANSLATION	protein_coding	-	CCDS17990.1	1	694	13	6.85	1.5	61.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000017264	Exosc10	ENSMUST00000126897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017264	Exosc10	ENSMUST00000017408	ENSMUSP00000017408	TRANSLATION	protein_coding	-	CCDS18939.1	1	887	8	10.88	0.5	294.3	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000017264	Exosc10	ENSMUST00000076022	ENSMUSP00000075401	TRANSLATION	protein_coding	-	-	1	862	8	10.88	0	294.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000017264	Exosc10	ENSMUST00000173154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017264	Exosc10	ENSMUST00000150723	ENSMUSP00000133336	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017264	Exosc10	ENSMUST00000173767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017264	Exosc10	ENSMUST00000097781	ENSMUSP00000095388	TRANSLATION	nonsense_mediated_decay	-	-	1	618	8	10.58	0	294.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017264	Exosc10	ENSMUST00000173892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028557	Rnf11	ENSMUST00000145980	ENSMUSP00000115779	TRANSLATION	protein_coding	stop	-	3	144	8	1.16	0	45.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028557	Rnf11	ENSMUST00000064167	ENSMUSP00000063798	TRANSLATION	protein_coding	-	CCDS18464.1	1	154	8	1.358	20.3	45.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028557	Rnf11	ENSMUST00000030284	ENSMUSP00000030284	TRANSLATION	protein_coding	-	CCDS18464.1	1	154	8	1.358	20.3	45.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000073877	Gm13306	ENSMUST00000131704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073877	Gm13306	ENSMUST00000108018	ENSMUSP00000103653	TRANSLATION	protein_coding	-	CCDS57270.1	1	135	0	2	0.5	30.8	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000073877	Gm13306	ENSMUST00000154600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073877	Gm13306	ENSMUST00000098122	ENSMUSP00000095726	TRANSLATION	protein_coding	-	CCDS51149.1	1	120	0	2	1.5	30.8	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000051435	Fhad1	ENSMUST00000124125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051435	Fhad1	ENSMUST00000137618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051435	Fhad1	ENSMUST00000036701	ENSMUSP00000036224	TRANSLATION	protein_coding	-	-	1	396	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000051435	Fhad1	ENSMUST00000105780	ENSMUSP00000101406	TRANSLATION	protein_coding	-	CCDS51349.1	5	1420	0	1.2	0.5	57.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051435	Fhad1	ENSMUST00000125293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051435	Fhad1	ENSMUST00000129192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051435	Fhad1	ENSMUST00000123068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051435	Fhad1	ENSMUST00000105779	ENSMUSP00000101405	TRANSLATION	protein_coding	-	CCDS51349.1	5	1420	0	1.2	0.5	57.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050212	Eva1b	ENSMUST00000052876	ENSMUSP00000054141	TRANSLATION	protein_coding	-	CCDS18643.1	1	164	0	0	4.1	187.1	1	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000050212	Eva1b	ENSMUST00000106152	ENSMUSP00000101758	TRANSLATION	protein_coding	-	CCDS18643.1	1	164	0	0	4.1	187.1	1	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000050212	Eva1b	ENSMUST00000106150	ENSMUSP00000101756	TRANSLATION	protein_coding	-	CCDS18643.1	1	164	0	0	4.1	187.1	1	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000033191	Tie1	ENSMUST00000184261	ENSMUSP00000139279	TRANSLATION	protein_coding	-	-	2	647	3	8.24	0	144.5	0	2,-2	-	-	0	MINOR
ENSMUSG00000033191	Tie1	ENSMUST00000047421	ENSMUSP00000037129	TRANSLATION	protein_coding	-	CCDS18553.1	1	1134	20	16.24	1.5	503.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033191	Tie1	ENSMUST00000153286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058498	Rnf207	ENSMUST00000145311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000170820	ENSMUSP00000129400	TRANSLATION	protein_coding	stop	-	5	515	19	0.8	0	65.1	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000058498	Rnf207	ENSMUST00000127565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000130008	ENSMUSP00000127196	TRANSLATION	nonsense_mediated_decay	-	-	1	71	8	0.8	0	29.3	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000058498	Rnf207	ENSMUST00000143968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000135837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000146496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000142427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000108688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000076183	ENSMUSP00000075540	TRANSLATION	protein_coding	-	CCDS51393.1	1	635	19	0.8	1.5	93.1	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000058498	Rnf207	ENSMUST00000123133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058498	Rnf207	ENSMUST00000134269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043383	Olfr1342	ENSMUST00000216226	ENSMUSP00000149966	TRANSLATION	protein_coding	-	CCDS18557.1	2	315	0	0.36	5.1	187	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000043383	Olfr1342	ENSMUST00000060562	ENSMUSP00000053925	TRANSLATION	protein_coding	-	CCDS18557.1	-	315	0	0.36	5.1	187	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000099294	Gm11214	ENSMUST00000184810	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000099294	Gm11214	ENSMUST00000184252	ENSMUSP00000138923	TRANSLATION	protein_coding	start	-	-	183	6	1	0	196.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000050234	Gja4	ENSMUST00000053753	ENSMUSP00000062320	TRANSLATION	protein_coding	-	CCDS18667.1	1	333	0	0.56	7.5	320.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000028609	Magoh	ENSMUST00000141376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028609	Magoh	ENSMUST00000030348	ENSMUSP00000030348	TRANSLATION	protein_coding	-	CCDS18441.1	1	146	0	4.25	19.5	267.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000094958	3110021N24Rik	ENSMUST00000178992	ENSMUSP00000136370	TRANSLATION	protein_coding	-	-	5	152	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000028322	Exosc3	ENSMUST00000152056	ENSMUSP00000115532	TRANSLATION	protein_coding	start/stop	-	5	145	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028322	Exosc3	ENSMUST00000130843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028322	Exosc3	ENSMUST00000143111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028322	Exosc3	ENSMUST00000030003	ENSMUSP00000030003	TRANSLATION	protein_coding	-	CCDS18136.1	1	274	0	4.75	4.1	53.6	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000028629	Exo5	ENSMUST00000144114	ENSMUSP00000116454	TRANSLATION	protein_coding	start	-	2	159	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028629	Exo5	ENSMUST00000156836	ENSMUSP00000118041	TRANSLATION	protein_coding	stop	-	2	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028629	Exo5	ENSMUST00000177880	ENSMUSP00000136408	TRANSLATION	protein_coding	-	CCDS18596.1	2	373	2	0	1.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000028629	Exo5	ENSMUST00000030375	ENSMUSP00000030375	TRANSLATION	protein_coding	-	CCDS18596.1	1	373	2	0	1.5	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000057751	Megf6	ENSMUST00000127088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057751	Megf6	ENSMUST00000030897	ENSMUSP00000030897	TRANSLATION	protein_coding	-	CCDS51398.1	5	1572	46	20.34	1.5	517.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000057751	Megf6	ENSMUST00000142110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057751	Megf6	ENSMUST00000152159	ENSMUSP00000121641	TRANSLATION	protein_coding	stop	-	5	1192	36	16.4	0	396.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000057751	Megf6	ENSMUST00000183595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057751	Megf6	ENSMUST00000128700	ENSMUSP00000117277	TRANSLATION	protein_coding	start/stop	-	5	332	10	5.48	0	130.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057751	Megf6	ENSMUST00000138945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083780	Gm12728	ENSMUST00000185012	ENSMUSP00000139082	TRANSLATION	protein_coding	-	-	5	77	3	1	0	52.1	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000083780	Gm12728	ENSMUST00000184254	ENSMUSP00000138955	TRANSLATION	protein_coding	-	-	5	77	3	1	0	52.1	0	-4,-5	-	-	15	PRINCIPAL:5
ENSMUSG00000083780	Gm12728	ENSMUST00000119740	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000097078	Gm26566	ENSMUST00000181601	ENSMUSP00000137773	TRANSLATION	protein_coding	-	-	-	153	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028494	Plin2	ENSMUST00000000466	ENSMUSP00000000466	TRANSLATION	protein_coding	-	CCDS18308.1	1	425	0	2.23	1.5	506.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028494	Plin2	ENSMUST00000147097	ENSMUSP00000119063	TRANSLATION	protein_coding	stop	-	5	157	0	0.68	0	165.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028494	Plin2	ENSMUST00000134094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028494	Plin2	ENSMUST00000138605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028494	Plin2	ENSMUST00000154999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028494	Plin2	ENSMUST00000134437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028494	Plin2	ENSMUST00000140382	ENSMUSP00000123456	TRANSLATION	protein_coding	stop	-	3	196	0	0	0	274.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028494	Plin2	ENSMUST00000149700	ENSMUSP00000123333	TRANSLATION	protein_coding	stop	-	2	196	0	0	0	274.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062518	Zfp534	ENSMUST00000117638	ENSMUSP00000113561	TRANSLATION	protein_coding	-	CCDS57313.1	2	661	60	1.4	0.5	439.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000110404	Rnf223	ENSMUST00000209248	ENSMUSP00000147415	TRANSLATION	protein_coding	-	CCDS84838.1	-	255	8	0.16	2.7	35.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000073723	Gm13102	ENSMUST00000105761	ENSMUSP00000101387	TRANSLATION	protein_coding	-	CCDS57309.1	2	500	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000073723	Gm13102	ENSMUST00000097800	ENSMUSP00000095409	TRANSLATION	protein_coding	-	-	5	504	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000073723	Gm13102	ENSMUST00000097799	ENSMUSP00000095408	TRANSLATION	protein_coding	-	-	2	519	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000034762	Glis1	ENSMUST00000135835	ENSMUSP00000118600	TRANSLATION	protein_coding	stop	-	3	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034762	Glis1	ENSMUST00000046005	ENSMUSP00000035650	TRANSLATION	protein_coding	-	CCDS38831.1	1	789	20	2.4	0.5	52.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000034762	Glis1	ENSMUST00000138211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034762	Glis1	ENSMUST00000130573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034762	Glis1	ENSMUST00000125573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034762	Glis1	ENSMUST00000106738	ENSMUSP00000102349	TRANSLATION	protein_coding	-	-	5	601	20	2.4	0	52.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028397	Kdm4c	ENSMUST00000030102	ENSMUSP00000030102	TRANSLATION	protein_coding	-	CCDS18287.1	1	1054	15	7.5	0.5	363.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028397	Kdm4c	ENSMUST00000150439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028397	Kdm4c	ENSMUST00000077851	ENSMUSP00000077017	TRANSLATION	protein_coding	-	CCDS18287.1	1	1054	15	7.5	0.5	363.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028397	Kdm4c	ENSMUST00000149295	ENSMUSP00000118728	TRANSLATION	protein_coding	stop	-	3	149	0	2	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028397	Kdm4c	ENSMUST00000148753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028397	Kdm4c	ENSMUST00000156065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048626	Klf17	ENSMUST00000062747	ENSMUSP00000052316	TRANSLATION	protein_coding	-	CCDS18537.1	1	341	12	1	0.5	47.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036887	C1qa	ENSMUST00000046285	ENSMUSP00000048836	TRANSLATION	protein_coding	-	CCDS18812.1	1	245	0	1.64	5.1	148.8	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000057572	Zbtb8os	ENSMUST00000119480	ENSMUSP00000113004	TRANSLATION	protein_coding	-	-	5	136	0	1.96	0	103.7	0	-4,-5	-	-	5.508	MINOR
ENSMUSG00000057572	Zbtb8os	ENSMUST00000146767	ENSMUSP00000114628	TRANSLATION	nonsense_mediated_decay	-	-	1	146	0	2.846	0	122.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057572	Zbtb8os	ENSMUST00000140272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057572	Zbtb8os	ENSMUST00000106047	ENSMUSP00000101662	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057572	Zbtb8os	ENSMUST00000141235	ENSMUSP00000120925	TRANSLATION	protein_coding	-	CCDS18689.1	1	167	0	3.56	7.2	158.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047155	Cyp4x1	ENSMUST00000051400	ENSMUSP00000059545	TRANSLATION	protein_coding	-	CCDS18488.1	1	507	30	9.38	1.5	389.3	0	0,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000047155	Cyp4x1	ENSMUST00000106545	ENSMUSP00000102155	TRANSLATION	protein_coding	-	-	1	481	30	9.38	0	389.3	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000032726	Bmp8a	ENSMUST00000102641	ENSMUSP00000099701	TRANSLATION	protein_coding	-	CCDS18616.1	1	399	0	4.09	1.5	345	0	1,-2	-	-	11.202	PRINCIPAL:3
ENSMUSG00000032726	Bmp8a	ENSMUST00000040496	ENSMUSP00000037779	TRANSLATION	protein_coding	-	CCDS57293.1	1	412	0	4.49	0.5	334.8	0	1,-2	-	-	11.388	ALTERNATIVE:2
ENSMUSG00000095896	Ifna14	ENSMUST00000102808	ENSMUSP00000099872	TRANSLATION	protein_coding	-	CCDS18320.1	-	189	3	1	1.5	203.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028211	Trp53inp1	ENSMUST00000029865	ENSMUSP00000029865	TRANSLATION	protein_coding	-	CCDS17964.1	1	239	0	0	6.3	273	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000028211	Trp53inp1	ENSMUST00000132693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028211	Trp53inp1	ENSMUST00000132010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028211	Trp53inp1	ENSMUST00000132346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028730	Cfap57	ENSMUST00000081921	ENSMUSP00000080592	TRANSLATION	protein_coding	-	CCDS51286.1	5	1249	0	4.68	1.5	30.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028730	Cfap57	ENSMUST00000071972	ENSMUSP00000071863	TRANSLATION	protein_coding	-	CCDS51286.1	5	1249	0	4.68	1.5	30.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028626	Col9a2	ENSMUST00000030372	ENSMUSP00000030372	TRANSLATION	protein_coding	-	CCDS18599.1	1	688	0	13.632	2.7	204.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028626	Col9a2	ENSMUST00000140119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028626	Col9a2	ENSMUST00000151987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028559	Osbpl9	ENSMUST00000160271	ENSMUSP00000124112	TRANSLATION	protein_coding	-	CCDS51257.1	1	626	0	5.995	4.1	279.4	0	-4,-6	-	-	5.138	MINOR
ENSMUSG00000028559	Osbpl9	ENSMUST00000084366	ENSMUSP00000081396	TRANSLATION	protein_coding	-	CCDS51258.1	1	639	0	5.995	6.6	279.4	0	-4,-7	-	-	5.918	MINOR
ENSMUSG00000028559	Osbpl9	ENSMUST00000030288	ENSMUSP00000030288	TRANSLATION	protein_coding	-	-	1	736	10	8.665	13.8	320.9	0	-4,-6	-	-	22	ALTERNATIVE:1
ENSMUSG00000028559	Osbpl9	ENSMUST00000160895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028559	Osbpl9	ENSMUST00000161363	ENSMUSP00000125714	TRANSLATION	protein_coding	-	-	5	656	0	6.745	0	279.4	0	-2,-5	-	-	5.67	MINOR
ENSMUSG00000028559	Osbpl9	ENSMUST00000159758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028559	Osbpl9	ENSMUST00000162787	ENSMUSP00000124370	TRANSLATION	protein_coding	-	CCDS38835.2	1	723	10	8.665	13.6	320.9	0	-4,-6	-	-	21.936	PRINCIPAL:2
ENSMUSG00000028559	Osbpl9	ENSMUST00000161602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028559	Osbpl9	ENSMUST00000126288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000147457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000155434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000159198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000153714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000139412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000152167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000139248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028559	Osbpl9	ENSMUST00000194478	ENSMUSP00000141991	TRANSLATION	protein_coding	-	CCDS84775.1	5	746	10	8.665	6.6	320.9	0	-4,-6	-	-	19.748	MINOR
ENSMUSG00000028559	Osbpl9	ENSMUST00000159545	ENSMUSP00000123856	TRANSLATION	nonsense_mediated_decay	-	-	5	67	10	1.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028559	Osbpl9	ENSMUST00000160774	ENSMUSP00000124742	TRANSLATION	protein_coding	-	-	5	719	8	8.345	2.4	270.7	0	-4,-6	-	-	13.45	MINOR
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000103173	ENSMUSP00000099462	TRANSLATION	protein_coding	-	CCDS19056.1	1	228	0	1.4	1.5	0	2	1,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000122001	ENSMUSP00000113277	TRANSLATION	protein_coding	-	-	1	314	0	1.4	0	0	2	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000040274	ENSMUSP00000040035	TRANSLATION	protein_coding	-	CCDS19057.1	1	132	0	1	0.5	0	0	1,-3	-	-	4.284	MINOR
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000125100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000124339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041954	Tnfrsf18	ENSMUST00000141260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095234	Gm21586	ENSMUST00000107988	ENSMUSP00000103622	TRANSLATION	protein_coding	-	CCDS57273.1	1	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000095234	Gm21586	ENSMUST00000238328	ENSMUSP00000158759	TRANSLATION	protein_coding	-	CCDS57273.1	-	87	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000070923	Klhl9	ENSMUST00000094993	ENSMUSP00000092602	TRANSLATION	protein_coding	-	CCDS38800.1	-	617	0	0.2	7.5	355.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078680	Mup10	ENSMUST00000098047	ENSMUSP00000095655	TRANSLATION	protein_coding	-	CCDS51189.1	2	180	0	5.08	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078680	Mup10	ENSMUST00000148302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028862	Map3k6	ENSMUST00000134895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028862	Map3k6	ENSMUST00000127681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028862	Map3k6	ENSMUST00000030677	ENSMUSP00000030677	TRANSLATION	protein_coding	-	CCDS18744.1	1	1291	19	13.56	1.5	692.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028862	Map3k6	ENSMUST00000123612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028664	Ephb2	ENSMUST00000059287	ENSMUSP00000058135	TRANSLATION	protein_coding	-	CCDS71498.1	2	987	19	12.38	1.5	880.1	2	2,-2	-	-	18.188	MINOR
ENSMUSG00000028664	Ephb2	ENSMUST00000105845	ENSMUSP00000101471	TRANSLATION	protein_coding	-	CCDS18809.1	1	986	19	12.18	6.3	875.5	2	2,-2	-	-	19.322	PRINCIPAL:2
ENSMUSG00000028664	Ephb2	ENSMUST00000156558	ENSMUSP00000116350	TRANSLATION	protein_coding	start/stop	-	3	276	0	3.8	0	176.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000028664	Ephb2	ENSMUST00000151502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028664	Ephb2	ENSMUST00000105846	ENSMUSP00000101472	TRANSLATION	protein_coding	-	-	5	987	19	12.18	6.3	878.5	2	2,-2	-	-	19.502	ALTERNATIVE:1
ENSMUSG00000028664	Ephb2	ENSMUST00000144573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028937	Acot7	ENSMUST00000167926	ENSMUSP00000129121	TRANSLATION	protein_coding	-	CCDS51391.1	1	384	29	7.75	1.5	113	0	-3,-2	-	-	18	PRINCIPAL:4
ENSMUSG00000028937	Acot7	ENSMUST00000105652	ENSMUSP00000101277	TRANSLATION	protein_coding	-	CCDS51392.1	1	350	29	7.75	1.7	113	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000028937	Acot7	ENSMUST00000075363	ENSMUSP00000074827	TRANSLATION	protein_coding	-	CCDS51390.1	1	379	29	7.75	0.5	113	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000028937	Acot7	ENSMUST00000144733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028937	Acot7	ENSMUST00000030779	ENSMUSP00000030779	TRANSLATION	protein_coding	-	-	1	381	29	7.75	1.5	113	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000028937	Acot7	ENSMUST00000124548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028873	Cdca8	ENSMUST00000135571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028873	Cdca8	ENSMUST00000125801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028873	Cdca8	ENSMUST00000147074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028873	Cdca8	ENSMUST00000030690	ENSMUSP00000030690	TRANSLATION	protein_coding	-	-	1	326	0	4.05	0	150.7	0	-4,-2	-	-	10.362	MINOR
ENSMUSG00000028873	Cdca8	ENSMUST00000165281	ENSMUSP00000132145	TRANSLATION	protein_coding	stop	-	3	105	0	2.3	0	65.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028873	Cdca8	ENSMUST00000084296	ENSMUSP00000081319	TRANSLATION	protein_coding	-	CCDS18631.1	1	289	0	4.55	1.5	161.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041202	Pla2g2d	ENSMUST00000105806	ENSMUSP00000101432	TRANSLATION	protein_coding	-	CCDS84811.1	1	118	6	3	0.5	120.3	0	-4,-5	-	-	15.75	MINOR
ENSMUSG00000041202	Pla2g2d	ENSMUST00000030528	ENSMUSP00000030528	TRANSLATION	protein_coding	-	CCDS18833.1	1	144	6	3.9	5.1	127.8	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000028920	Fbxo42	ENSMUST00000146768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028920	Fbxo42	ENSMUST00000030757	ENSMUSP00000030757	TRANSLATION	protein_coding	-	CCDS18866.1	1	717	2	2.38	7.5	102.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000054958	Nt5c1a	ENSMUST00000068262	ENSMUSP00000069422	TRANSLATION	protein_coding	-	CCDS38871.1	1	365	0	0	6.3	352.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028874	Fgr	ENSMUST00000171223	ENSMUSP00000128411	TRANSLATION	protein_coding	-	CCDS18739.1	1	517	17	9.75	1.5	463.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028874	Fgr	ENSMUST00000138179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028874	Fgr	ENSMUST00000124451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028874	Fgr	ENSMUST00000030693	ENSMUSP00000030693	TRANSLATION	protein_coding	-	CCDS18739.1	1	517	17	9.75	1.5	463.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049488	Tmem67	ENSMUST00000147746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049488	Tmem67	ENSMUST00000151859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049488	Tmem67	ENSMUST00000108293	ENSMUSP00000103928	TRANSLATION	protein_coding	-	-	5	1061	0	0	0.5	1163.4	5	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000049488	Tmem67	ENSMUST00000146140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049488	Tmem67	ENSMUST00000131145	ENSMUSP00000115154	TRANSLATION	nonsense_mediated_decay	start	-	1	207	0	0	0	0	0	1,3	-	-	-1	MINOR
ENSMUSG00000049488	Tmem67	ENSMUST00000050686	ENSMUSP00000052644	TRANSLATION	protein_coding	-	CCDS17974.1	1	995	0	0	2.7	1163.4	5	1,4	-	-	6	PRINCIPAL:2
ENSMUSG00000039852	Rere	ENSMUST00000137112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039852	Rere	ENSMUST00000105680	ENSMUSP00000101305	TRANSLATION	protein_coding	-	-	5	1290	4	3.794	0	1873.8	0	-4,-6	-	-	13.012	MINOR
ENSMUSG00000039852	Rere	ENSMUST00000131600	ENSMUSP00000115385	TRANSLATION	protein_coding	start/stop	-	2	178	0	0	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039852	Rere	ENSMUST00000105682	ENSMUSP00000101307	TRANSLATION	protein_coding	-	CCDS38979.1	5	1558	4	3.53	0.5	1923.6	0	-4,-5	-	-	15.472	PRINCIPAL:1
ENSMUSG00000039852	Rere	ENSMUST00000142379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039852	Rere	ENSMUST00000136646	ENSMUSP00000121544	TRANSLATION	protein_coding	start	-	1	199	0	0	0	408.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039852	Rere	ENSMUST00000219467	ENSMUSP00000151591	TRANSLATION	protein_coding	start/stop	-	2	435	0	0	0	844.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039852	Rere	ENSMUST00000129188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036896	C1qc	ENSMUST00000046332	ENSMUSP00000036747	TRANSLATION	protein_coding	-	CCDS18811.1	1	246	0	1.6	1.5	164.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036896	C1qc	ENSMUST00000153104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092345	Gm20503	ENSMUST00000174664	ENSMUSP00000134530	TRANSLATION	protein_coding,RT	-	-	5	150	0	1.48	0	93	0	0,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000028613	Lrp8	ENSMUST00000106733	ENSMUSP00000102344	TRANSLATION	protein_coding	-	-	5	896	60	15.935	2.7	567.7	5	3,-2	-	-	10.5	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238651	ENSMUSP00000158650	TRANSLATION	protein_coding	-	-	-	726	34	13.805	0	397.3	5	3,-2	-	-	0	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028613	Lrp8	ENSMUST00000030356	ENSMUSP00000030356	TRANSLATION	protein_coding	-	-	5	955	60	15.935	2.7	567.7	5	3,-2	-	-	10.5	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028613	Lrp8	ENSMUST00000238421	ENSMUSP00000158608	TRANSLATION	protein_coding	-	-	-	787	34	13.475	0	387.2	5	3,-2	-	-	0	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238255	ENSMUSP00000158681	TRANSLATION	protein_coding	start	-	-	189	0	1.315	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028613	Lrp8	ENSMUST00000146552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028613	Lrp8	ENSMUST00000145832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028613	Lrp8	ENSMUST00000238569	ENSMUSP00000158644	TRANSLATION	protein_coding	-	-	-	996	65	16.935	2.7	603.8	5	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028613	Lrp8	ENSMUST00000126573	ENSMUSP00000118020	TRANSLATION	protein_coding	-	-	5	694	42	14.445	0	431.1	5	3,-2	-	-	1.02	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028613	Lrp8	ENSMUST00000123140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028613	Lrp8	ENSMUST00000147319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028613	Lrp8	ENSMUST00000106732	ENSMUSP00000102343	TRANSLATION	protein_coding	start	-	1	832	41	14.805	0	431.1	5	3,-2	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238693	ENSMUSP00000158682	TRANSLATION	protein_coding	start	-	-	124	0	0.315	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000135022	ENSMUSP00000158799	TRANSLATION	protein_coding	start/stop	-	5	157	5	3.83	0	89.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000106731	ENSMUSP00000102342	TRANSLATION	protein_coding	-	CCDS51255.1	1	870	47	15.805	2.7	467.2	5	3,-2	-	-	3.738	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000135591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028613	Lrp8	ENSMUST00000238658	ENSMUSP00000158812	TRANSLATION	nonsense_mediated_decay	start	-	-	135	0	2.5	0	78.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000143601	ENSMUSP00000115854	TRANSLATION	nonsense_mediated_decay	-	-	1	996	65	16.935	2.7	603.8	5	3,-2	-	-	-1	MINOR
ENSMUSG00000028613	Lrp8	ENSMUST00000238584	ENSMUSP00000158610	TRANSLATION	protein_coding	-	-	-	828	42	14.805	1.7	431.1	5	3,-2	-	-	1.74	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000147785	ENSMUSP00000114313	TRANSLATION	protein_coding	stop	-	5	128	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000133874	ENSMUSP00000116589	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000129602	ENSMUSP00000118647	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000147764	ENSMUSP00000120600	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000136831	ENSMUSP00000116596	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000153189	ENSMUSP00000123322	TRANSLATION	protein_coding	stop	-	2	175	0	0.291	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000130181	ENSMUSP00000115992	TRANSLATION	protein_coding	stop	-	5	175	0	0.291	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000123150	ENSMUSP00000121037	TRANSLATION	protein_coding	stop	-	2	73	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000105784	ENSMUSP00000101410	TRANSLATION	protein_coding	-	CCDS18876.1	5	375	22	2.897	0.5	129.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000006219	Fblim1	ENSMUST00000141518	ENSMUSP00000123669	TRANSLATION	protein_coding	stop	-	5	182	0	0.291	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000006381	ENSMUSP00000006381	TRANSLATION	protein_coding	-	CCDS18876.1	1	375	22	2.897	0.5	129.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000006219	Fblim1	ENSMUST00000137491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006219	Fblim1	ENSMUST00000127455	ENSMUSP00000120028	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006219	Fblim1	ENSMUST00000105785	ENSMUSP00000101411	TRANSLATION	protein_coding	-	CCDS18876.1	1	375	22	2.897	0.5	129.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000006219	Fblim1	ENSMUST00000131317	ENSMUSP00000116395	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028278	Rragd	ENSMUST00000029946	ENSMUSP00000029946	TRANSLATION	protein_coding	-	-	5	454	19	5.06	0	241.1	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028278	Rragd	ENSMUST00000084747	ENSMUSP00000081799	TRANSLATION	protein_coding	-	-	5	279	7	3.58	0	133.3	0	-4,0	-	-	3.042	MINOR
ENSMUSG00000028278	Rragd	ENSMUST00000136792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028278	Rragd	ENSMUST00000098190	ENSMUSP00000095792	TRANSLATION	protein_coding	-	CCDS38704.1	2	399	19	5.06	6.3	241.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000048899	Rimkla	ENSMUST00000049994	ENSMUSP00000058996	TRANSLATION	protein_coding	-	CCDS18583.1	1	380	17	2.08	0.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048899	Rimkla	ENSMUST00000126728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040740	Slc25a34	ENSMUST00000038661	ENSMUSP00000039188	TRANSLATION	protein_coding	-	CCDS18878.1	1	318	0	2.52	1.5	162.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039774	Galnt12	ENSMUST00000107744	ENSMUSP00000103373	TRANSLATION	protein_coding	-	-	1	284	11	4.878	0	111.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000039774	Galnt12	ENSMUST00000045041	ENSMUSP00000045721	TRANSLATION	protein_coding	-	CCDS18158.1	1	576	23	8.078	1.5	227.8	0	0,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037583	Nr0b2	ENSMUST00000042706	ENSMUSP00000039175	TRANSLATION	protein_coding	-	CCDS18751.1	1	260	0	2	2.7	54.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000106548	ENSMUSP00000102158	TRANSLATION	protein_coding	-	CCDS18487.1	1	114	0	0	2.9	112.7	2	-1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000177647	ENSMUSP00000136049	TRANSLATION	protein_coding	-	CCDS18487.1	3	114	0	0	2.9	112.7	2	-1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000171877	ENSMUSP00000128118	TRANSLATION	protein_coding	-	CCDS51272.1	1	181	0	0	0.5	112.7	3	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000149245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000146578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000030488	ENSMUSP00000030488	TRANSLATION	protein_coding	-	CCDS18487.1	1	114	0	0	2.9	112.7	2	-1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000139710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028716	Pdzk1ip1	ENSMUST00000124491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050890	Pdik1l	ENSMUST00000105876	ENSMUSP00000101502	TRANSLATION	protein_coding	-	CCDS18768.1	1	341	20	1.8	14.8	173.4	0	-4,-6	-	-	21.682	PRINCIPAL:1
ENSMUSG00000050890	Pdik1l	ENSMUST00000142504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050890	Pdik1l	ENSMUST00000145006	ENSMUSP00000118116	TRANSLATION	protein_coding	stop	-	5	191	11	0.48	0	118.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050890	Pdik1l	ENSMUST00000127857	ENSMUSP00000117719	TRANSLATION	protein_coding	stop	-	1	155	9	0.84	0	42.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050890	Pdik1l	ENSMUST00000061234	ENSMUSP00000060381	TRANSLATION	protein_coding	-	CCDS18768.1	1	341	20	1.8	14.8	173.4	0	-4,-6	-	-	21.682	PRINCIPAL:1
ENSMUSG00000050890	Pdik1l	ENSMUST00000105877	ENSMUSP00000101503	TRANSLATION	protein_coding	-	-	5	417	20	1.9	0	173.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000034645	Zyg11a	ENSMUST00000223127	ENSMUSP00000152477	TRANSLATION	protein_coding	-	-	5	760	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000034645	Zyg11a	ENSMUST00000043793	ENSMUSP00000038478	TRANSLATION	protein_coding	-	CCDS51256.1	5	706	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000034645	Zyg11a	ENSMUST00000106690	ENSMUSP00000102301	TRANSLATION	protein_coding	-	-	5	708	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000028743	Akr7a5	ENSMUST00000153645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028743	Akr7a5	ENSMUST00000073787	ENSMUSP00000073459	TRANSLATION	protein_coding	-	CCDS18844.1	1	367	25	7	0.5	176.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000099420	Gm13279	ENSMUST00000178602	ENSMUSP00000136472	TRANSLATION	protein_coding	-	CCDS57285.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000053510	Nrd1	ENSMUST00000150784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053510	Nrd1	ENSMUST00000143015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000102736	ENSMUSP00000099797	TRANSLATION	protein_coding	-	-	1	1117	4	16.422	0	522.4	0	-4,-1	-	-	11.362	MINOR
ENSMUSG00000053510	Nrd1	ENSMUST00000148444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053510	Nrd1	ENSMUST00000106644	ENSMUSP00000102255	TRANSLATION	protein_coding	-	CCDS84773.1	5	1229	4	17.407	0.5	559.8	0	-4,-1	-	-	15.574	ALTERNATIVE:2
ENSMUSG00000053510	Nrd1	ENSMUST00000125063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000150177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000125645	ENSMUSP00000122808	TRANSLATION	protein_coding	stop	-	1	395	1	8.425	0	243.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053510	Nrd1	ENSMUST00000155228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000143604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000150796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053510	Nrd1	ENSMUST00000065977	ENSMUSP00000068328	TRANSLATION	protein_coding	-	CCDS18460.1	1	1161	4	17.137	0.5	566.9	0	-4,-1	-	-	15.46	PRINCIPAL:3
ENSMUSG00000082932	Cyp2j8	ENSMUST00000124729	ENSMUSP00000134591	TRANSLATION	protein_coding	-	CCDS57288.1	5	503	32	8.22	1.5	444.4	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070972	Dnajc25	ENSMUST00000148366	ENSMUSP00000116171	TRANSLATION	protein_coding	stop	-	1	79	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070972	Dnajc25	ENSMUST00000153467	ENSMUSP00000114320	TRANSLATION	nonsense_mediated_decay	-	-	5	152	0	0.48	0	56	0	0,-3	-	-	-1	MINOR
ENSMUSG00000070972	Dnajc25	ENSMUST00000150309	ENSMUSP00000123172	TRANSLATION	nonsense_mediated_decay	-	-	5	159	0	0.546	0	55	0	0,-3	-	-	-1	MINOR
ENSMUSG00000070972	Dnajc25	ENSMUST00000095070	ENSMUSP00000092680	TRANSLATION	protein_coding	-	CCDS18216.2	1	357	0	1.61	3.9	69.1	1	0,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000070972	Dnajc25	ENSMUST00000152199	ENSMUSP00000118048	TRANSLATION	protein_coding	-	-	5	238	0	0.8	0.5	0	1	-4,-6	-	-	2.982	MINOR
ENSMUSG00000055761	Nkain3	ENSMUST00000102998	ENSMUSP00000100063	TRANSLATION	protein_coding	-	CCDS17997.1	1	166	0	0	0.5	258.7	4	1,-3	-	-	4.512	MINOR
ENSMUSG00000055761	Nkain3	ENSMUST00000119374	ENSMUSP00000113113	TRANSLATION	protein_coding	-	CCDS71349.1	1	181	0	0	12.5	283.5	5	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000034919	Ttc22	ENSMUST00000136505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034919	Ttc22	ENSMUST00000047922	ENSMUSP00000035773	TRANSLATION	protein_coding	-	CCDS18422.1	1	568	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000035696	Rnf38	ENSMUST00000136730	ENSMUSP00000116642	TRANSLATION	nonsense_mediated_decay	-	-	1	344	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035696	Rnf38	ENSMUST00000153116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000145760	ENSMUSP00000121329	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035696	Rnf38	ENSMUST00000102934	ENSMUSP00000099998	TRANSLATION	protein_coding	-	CCDS18123.1	5	432	8	2.83	6.3	47.1	0	-4,-2	-	-	19.917	ALTERNATIVE:1
ENSMUSG00000035696	Rnf38	ENSMUST00000147302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000145378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000153384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000129621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000148869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000128426	ENSMUSP00000119889	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035696	Rnf38	ENSMUST00000098098	ENSMUSP00000095702	TRANSLATION	protein_coding	-	CCDS18122.1	1	464	8	2.83	9.3	47.1	0	-4,-7	-	-	21	PRINCIPAL:4
ENSMUSG00000035696	Rnf38	ENSMUST00000045793	ENSMUSP00000038477	TRANSLATION	protein_coding	-	CCDS18123.1	1	432	8	2.83	6.3	47.1	0	-4,-2	-	-	19.917	ALTERNATIVE:1
ENSMUSG00000035696	Rnf38	ENSMUST00000123844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000143337	ENSMUSP00000122342	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035696	Rnf38	ENSMUST00000152216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035696	Rnf38	ENSMUST00000107836	ENSMUSP00000103467	TRANSLATION	protein_coding	-	CCDS18123.1	5	432	8	2.83	6.3	47.1	0	-4,-2	-	-	19.917	ALTERNATIVE:1
ENSMUSG00000035696	Rnf38	ENSMUST00000137194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056596	Trnp1	ENSMUST00000125541	ENSMUSP00000129613	TRANSLATION	protein_coding	-	CCDS38904.1	1	223	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056596	Trnp1	ENSMUST00000123169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045349	Sh2d5	ENSMUST00000124239	ENSMUSP00000119052	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045349	Sh2d5	ENSMUST00000105823	ENSMUSP00000101449	TRANSLATION	protein_coding	-	CCDS51335.1	1	429	0	0	3.9	0	0	-4,0	-	-	1	PRINCIPAL:1
ENSMUSG00000045349	Sh2d5	ENSMUST00000154421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045349	Sh2d5	ENSMUST00000139033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045349	Sh2d5	ENSMUST00000105824	ENSMUSP00000101450	TRANSLATION	protein_coding	-	CCDS51335.1	1	429	0	0	3.9	0	0	-4,0	-	-	1	PRINCIPAL:1
ENSMUSG00000028233	Tgs1	ENSMUST00000129964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028233	Tgs1	ENSMUST00000130514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028233	Tgs1	ENSMUST00000132518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028233	Tgs1	ENSMUST00000146315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028233	Tgs1	ENSMUST00000052712	ENSMUSP00000054112	TRANSLATION	protein_coding	-	CCDS17938.1	1	853	16	4.75	0.5	29.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028565	Nfia	ENSMUST00000133011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028565	Nfia	ENSMUST00000107062	ENSMUSP00000102677	TRANSLATION	protein_coding	-	-	5	498	0	0	7.3	513	0	-4,-5	-	-	4.568	MINOR
ENSMUSG00000028565	Nfia	ENSMUST00000148930	ENSMUSP00000122641	TRANSLATION	protein_coding	start/stop	-	5	274	0	0	0	328.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028565	Nfia	ENSMUST00000107057	ENSMUSP00000102672	TRANSLATION	protein_coding	-	-	5	380	0	0	0	408.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028565	Nfia	ENSMUST00000152023	ENSMUSP00000114880	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	165.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028565	Nfia	ENSMUST00000052018	ENSMUSP00000099856	TRANSLATION	protein_coding	-	-	5	487	0	0	0	568	0	-4,-5	-	-	6	MINOR
ENSMUSG00000028565	Nfia	ENSMUST00000075448	ENSMUSP00000074899	TRANSLATION	protein_coding	-	CCDS18373.1	1	509	0	0	14.5	568	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000028565	Nfia	ENSMUST00000092532	ENSMUSP00000130032	TRANSLATION	protein_coding	-	CCDS51234.1	1	466	0	0	6.7	493.7	0	-4,-5	-	-	3.23	MINOR
ENSMUSG00000040697	Dnajc16	ENSMUST00000038014	ENSMUSP00000048714	TRANSLATION	protein_coding	-	CCDS18882.1	1	772	0	3.09	1.5	122.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040697	Dnajc16	ENSMUST00000153880	ENSMUSP00000120783	TRANSLATION	protein_coding	stop	-	5	91	0	2.25	0	96.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000040697	Dnajc16	ENSMUST00000138654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028793	Rnf19b	ENSMUST00000097874	ENSMUSP00000095484	TRANSLATION	protein_coding	-	-	5	551	15	1.86	0	87.5	5	-4,-5	-	-	11.736	MINOR
ENSMUSG00000028793	Rnf19b	ENSMUST00000147238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028793	Rnf19b	ENSMUST00000168461	ENSMUSP00000131373	TRANSLATION	protein_coding	-	CCDS51305.1	5	731	23	2.2	0.5	87.5	5	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000028793	Rnf19b	ENSMUST00000152565	ENSMUSP00000119611	TRANSLATION	protein_coding	stop	-	5	352	15	2	0	87.5	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000028793	Rnf19b	ENSMUST00000030584	ENSMUSP00000030584	TRANSLATION	protein_coding	-	-	5	732	23	2.06	0.5	87.5	5	-4,-6	-	-	17.616	ALTERNATIVE:2
ENSMUSG00000028793	Rnf19b	ENSMUST00000130803	ENSMUSP00000121004	TRANSLATION	protein_coding	start	-	1	247	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000156746	ENSMUSP00000118640	TRANSLATION	protein_coding	stop	-	3	61	0	0.3	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000133956	ENSMUSP00000120181	TRANSLATION	protein_coding	stop	-	3	185	0	4.04	0	38.3	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000127574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028644	Ermap	ENSMUST00000030396	ENSMUSP00000030396	TRANSLATION	protein_coding	-	-	2	308	0	5.04	0	38.3	2	-3,-4	-	-	2.22	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000138395	ENSMUSP00000123426	TRANSLATION	protein_coding	-	CCDS18571.1	1	592	0	6.931	0.5	179.1	2	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000028644	Ermap	ENSMUST00000239029	ENSMUSP00000159033	TRANSLATION	protein_coding	-	-	-	566	0	6.931	0	179.1	2	-3,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000028644	Ermap	ENSMUST00000141227	ENSMUSP00000122864	TRANSLATION	protein_coding	stop	-	2	108	0	1.5	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000150864	ENSMUSP00000123484	TRANSLATION	protein_coding	stop	-	3	64	0	0.94	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028644	Ermap	ENSMUST00000137080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028644	Ermap	ENSMUST00000124626	ENSMUSP00000120202	TRANSLATION	protein_coding	stop	-	3	162	0	3.29	0	38.1	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028553	Angptl3	ENSMUST00000030280	ENSMUSP00000030280	TRANSLATION	protein_coding	-	CCDS38817.1	1	455	0	3.44	1.5	171.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028553	Angptl3	ENSMUST00000136091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028553	Angptl3	ENSMUST00000125546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053841	Txlna	ENSMUST00000084264	ENSMUSP00000081285	TRANSLATION	protein_coding	-	CCDS38887.1	1	554	0	0	1.5	392.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053841	Txlna	ENSMUST00000154105	ENSMUSP00000122382	TRANSLATION	protein_coding	stop	-	5	254	0	0	0	92.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053841	Txlna	ENSMUST00000132217	ENSMUSP00000118301	TRANSLATION	protein_coding	stop	-	5	248	0	0	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053841	Txlna	ENSMUST00000133803	ENSMUSP00000117368	TRANSLATION	protein_coding	stop	-	5	296	0	0	0	149.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053841	Txlna	ENSMUST00000046425	ENSMUSP00000042153	TRANSLATION	protein_coding	-	CCDS38887.1	1	554	0	0	1.5	392.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053841	Txlna	ENSMUST00000142577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053841	Txlna	ENSMUST00000130017	ENSMUSP00000117771	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070720	Tmem200b	ENSMUST00000094666	ENSMUSP00000092253	TRANSLATION	protein_coding	-	CCDS51316.1	-	284	0	0	1.5	86	2	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070720	Tmem200b	ENSMUST00000238733	ENSMUSP00000158757	TRANSLATION	protein_coding	-	CCDS51316.1	-	284	0	0	1.5	86	2	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000028514	Usp24	ENSMUST00000106798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028514	Usp24	ENSMUST00000094933	ENSMUSP00000092538	TRANSLATION	protein_coding	-	CCDS51251.1	5	2617	8	5.43	1.5	156.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028514	Usp24	ENSMUST00000165709	ENSMUSP00000133095	TRANSLATION	protein_coding	-	-	5	2618	8	5.43	1.5	156.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028514	Usp24	ENSMUST00000150521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095270	Ifna9	ENSMUST00000102807	ENSMUSP00000099871	TRANSLATION	protein_coding	-	CCDS18321.1	-	190	3	1	1.5	205.9	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000028259	Fhl5	ENSMUST00000029922	ENSMUSP00000029922	TRANSLATION	protein_coding	-	CCDS18009.1	1	284	34	5	7.5	166	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000028259	Fhl5	ENSMUST00000108204	ENSMUSP00000103839	TRANSLATION	protein_coding	-	CCDS18009.1	5	284	34	5	7.5	166	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000084346	Cyp4a30b	ENSMUST00000119958	ENSMUSP00000140857	TRANSLATION	protein_coding	-	CCDS80147.1	5	508	30	9.39	0.5	394.8	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048806	Ifnb1	ENSMUST00000055671	ENSMUSP00000056720	TRANSLATION	protein_coding	-	CCDS18318.1	-	182	3	1	0.5	139.4	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000066042	Med18	ENSMUST00000102567	ENSMUSP00000099627	TRANSLATION	protein_coding	-	CCDS18725.1	1	208	0	0	14.8	129.1	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000066042	Med18	ENSMUST00000123604	ENSMUSP00000120535	TRANSLATION	protein_coding	stop	-	3	122	0	0	0	36.6	0	-2,2	-	-	-1	MINOR
ENSMUSG00000078687	Mup8	ENSMUST00000163931	ENSMUSP00000128910	TRANSLATION	protein_coding	-	-	5	235	0	5.05	0.5	108.7	0	4,-1	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000078687	Mup8	ENSMUST00000095058	ENSMUSP00000092668	TRANSLATION	protein_coding	-	CCDS84740.1	2	180	0	5.08	0.5	108.7	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000028234	Rps20	ENSMUST00000103009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028234	Rps20	ENSMUST00000130128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028234	Rps20	ENSMUST00000138502	ENSMUSP00000120528	TRANSLATION	protein_coding	-	CCDS17940.1	1	119	0	2.75	19.5	106.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036073	Galt	ENSMUST00000154275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000150908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000130698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000108038	ENSMUSP00000103673	TRANSLATION	protein_coding	-	-	2	356	31	7.935	0	421.3	0	-4,-7	-	-	15.6	MINOR
ENSMUSG00000036073	Galt	ENSMUST00000132760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000133106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000147719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000084695	ENSMUSP00000081745	TRANSLATION	protein_coding	-	CCDS38720.1	1	360	31	8.58	2.9	439.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000036073	Galt	ENSMUST00000135734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036073	Galt	ENSMUST00000151490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058523	Mup5	ENSMUST00000082287	ENSMUSP00000080908	TRANSLATION	protein_coding	-	CCDS18232.1	1	180	0	5.08	0.5	122.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000101163	Gm13278	ENSMUST00000177771	ENSMUSP00000137618	TRANSLATION	protein_coding	-	CCDS38806.1	-	182	0	0.48	0.5	94.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000036905	C1qb	ENSMUST00000046384	ENSMUSP00000040246	TRANSLATION	protein_coding	-	CCDS18810.1	1	253	0	1.48	1.5	149.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000048351	Coa7	ENSMUST00000147054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048351	Coa7	ENSMUST00000141423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048351	Coa7	ENSMUST00000134394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048351	Coa7	ENSMUST00000073764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048351	Coa7	ENSMUST00000131656	ENSMUSP00000114906	TRANSLATION	protein_coding	-	CCDS18449.1	1	231	0	1.04	9.7	40.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028444	Cntfr	ENSMUST00000064443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028444	Cntfr	ENSMUST00000102961	ENSMUSP00000100026	TRANSLATION	protein_coding	-	CCDS18067.1	1	372	0	4.24	2.7	29.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028444	Cntfr	ENSMUST00000102962	ENSMUSP00000100027	TRANSLATION	protein_coding	-	CCDS18067.1	1	372	0	4.24	2.7	29.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028444	Cntfr	ENSMUST00000145379	ENSMUSP00000115631	TRANSLATION	protein_coding	stop	-	5	60	0	0.48	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028444	Cntfr	ENSMUST00000151181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028444	Cntfr	ENSMUST00000084701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038764	Ptpn3	ENSMUST00000123664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038764	Ptpn3	ENSMUST00000150445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038764	Ptpn3	ENSMUST00000075637	ENSMUSP00000075063	TRANSLATION	protein_coding	-	CCDS51181.1	5	913	11	14.04	7.5	549.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000038764	Ptpn3	ENSMUST00000151964	ENSMUSP00000120111	TRANSLATION	protein_coding	stop	-	5	37	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038764	Ptpn3	ENSMUST00000130900	ENSMUSP00000114805	TRANSLATION	protein_coding	stop	-	5	57	0	0.86	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038764	Ptpn3	ENSMUST00000153926	ENSMUSP00000122490	TRANSLATION	protein_coding	stop	-	5	229	0	4.79	0	130.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000043456	ENSMUSP00000048678	TRANSLATION	protein_coding	-	CCDS18204.1	1	893	0	0	0.5	52.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038729	Pakap	ENSMUST00000107598	ENSMUSP00000103224	TRANSLATION	protein_coding	-	CCDS18203.1	1	880	0	0	0.5	34.1	0	-4,-5	-	-	3.93	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000124581	ENSMUSP00000119742	TRANSLATION	protein_coding	stop	-	2	176	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000107600	ENSMUSP00000103226	TRANSLATION	protein_coding	-	-	2	921	0	0	0	34.9	0	-4,-5	-	-	4.02	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000238994	ENSMUSP00000159196	TRANSLATION	protein_coding	stop	-	-	336	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000102902	ENSMUSP00000099966	TRANSLATION	protein_coding	-	CCDS18205.1	1	795	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000098064	ENSMUSP00000095672	TRANSLATION	protein_coding	-	CCDS18203.1	1	880	0	0	0.5	34.1	0	-4,-5	-	-	3.93	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000132497	ENSMUSP00000120325	TRANSLATION	protein_coding	stop	-	2	186	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038729	Pakap	ENSMUST00000098065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038729	Pakap	ENSMUST00000102903	ENSMUSP00000099967	TRANSLATION	protein_coding	-	CCDS18205.1	1	795	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000012126	Ubxn11	ENSMUST00000127632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000123281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000139616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000142442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000156323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000151407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000156750	ENSMUSP00000117081	TRANSLATION	protein_coding	stop	-	3	173	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012126	Ubxn11	ENSMUST00000131329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000070246	ENSMUSP00000064030	TRANSLATION	protein_coding	-	-	5	366	0	1	0	87.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000012126	Ubxn11	ENSMUST00000135287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012126	Ubxn11	ENSMUST00000074690	ENSMUSP00000074255	TRANSLATION	protein_coding	-	CCDS18763.1	1	484	0	1	0.5	87.2	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000012126	Ubxn11	ENSMUST00000151113	ENSMUSP00000122892	TRANSLATION	protein_coding	start/stop	-	3	174	0	0.32	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052914	Cyp2j6	ENSMUST00000030303	ENSMUSP00000030303	TRANSLATION	protein_coding	-	CCDS18369.1	1	501	32	8.2	1.5	456.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028889	Yrdc	ENSMUST00000102628	ENSMUSP00000099688	TRANSLATION	protein_coding	-	CCDS18628.2	1	280	0	2.4	6.3	149.8	0	-3,0	-	-	14	PRINCIPAL:1
ENSMUSG00000028889	Yrdc	ENSMUST00000144851	ENSMUSP00000114150	TRANSLATION	protein_coding	stop	-	2	105	0	1.4	0	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028889	Yrdc	ENSMUST00000173434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015224	Cyp2j9	ENSMUST00000055693	ENSMUSP00000050464	TRANSLATION	protein_coding	-	CCDS18370.1	1	502	33	8	1.5	451.4	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000015224	Cyp2j9	ENSMUST00000126509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095139	Pou3f2	ENSMUST00000178174	ENSMUSP00000136147	TRANSLATION	protein_coding	-	CCDS18005.1	-	445	0	0.8	5.1	195	0	-1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000028902	Sf3a3	ENSMUST00000030734	ENSMUSP00000030734	TRANSLATION	protein_coding	-	CCDS38875.1	1	501	2	1.45	18.2	412.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028902	Sf3a3	ENSMUST00000151049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028902	Sf3a3	ENSMUST00000154712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038598	Shoc1	ENSMUST00000122832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038598	Shoc1	ENSMUST00000107547	ENSMUSP00000103171	TRANSLATION	protein_coding	-	-	5	1481	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000076438	Oxct2b	ENSMUST00000102648	ENSMUSP00000099708	TRANSLATION	protein_coding	-	CCDS18609.1	-	520	16	1	1.5	383.9	0	3,4	-	-	18	PRINCIPAL:1
ENSMUSG00000028291	Akirin2	ENSMUST00000132230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028291	Akirin2	ENSMUST00000084299	ENSMUSP00000081322	TRANSLATION	protein_coding	-	CCDS18027.1	1	201	0	0	8.8	0	0	-2,0	-	-	3	PRINCIPAL:1
ENSMUSG00000028979	Masp2	ENSMUST00000105701	ENSMUSP00000101326	TRANSLATION	protein_coding	-	CCDS18942.1	1	185	14	3	1.5	83.2	0	4,-1	-	-	0	MINOR
ENSMUSG00000028979	Masp2	ENSMUST00000136647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028979	Masp2	ENSMUST00000154898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028979	Masp2	ENSMUST00000052060	ENSMUSP00000049729	TRANSLATION	protein_coding	-	CCDS18941.1	1	685	25	9.5	1.5	465.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000078673	Mup19	ENSMUST00000107477	ENSMUSP00000103101	TRANSLATION	protein_coding	-	-	2	187	0	4.75	0	110.3	0	4,-1	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000078673	Mup19	ENSMUST00000080606	ENSMUSP00000079442	TRANSLATION	protein_coding	-	CCDS51200.1	1	180	0	5.08	0.5	110.3	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000043257	Pigv	ENSMUST00000067902	ENSMUSP00000065601	TRANSLATION	protein_coding	-	CCDS51322.1	1	119	0	0	1.5	72.4	1	-4,-7	-	-	0	MINOR
ENSMUSG00000043257	Pigv	ENSMUST00000062118	ENSMUSP00000050647	TRANSLATION	protein_coding	-	CCDS18755.1	1	493	0	0	2.7	587.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043257	Pigv	ENSMUST00000151837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045205	Dpy19l4	ENSMUST00000148524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045205	Dpy19l4	ENSMUST00000139385	ENSMUSP00000115537	TRANSLATION	protein_coding	start	-	5	496	0	0	0	244.3	11	3,-1	-	-	-1	MINOR
ENSMUSG00000045205	Dpy19l4	ENSMUST00000142005	ENSMUSP00000119923	TRANSLATION	nonsense_mediated_decay	-	-	5	286	0	0	0	255.2	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000045205	Dpy19l4	ENSMUST00000144941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045205	Dpy19l4	ENSMUST00000084892	ENSMUSP00000081954	TRANSLATION	protein_coding	-	CCDS38692.1	1	722	0	0	6.3	700.9	16	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000045205	Dpy19l4	ENSMUST00000128024	ENSMUSP00000122823	TRANSLATION	protein_coding	stop	-	1	524	0	0	0	461.2	14	-4,-5	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000147783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000107091	ENSMUSP00000102706	TRANSLATION	protein_coding	-	-	5	464	21	11.71	2.4	201	0	-4,-6	-	-	8.63	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000043335	ENSMUSP00000043460	TRANSLATION	protein_coding	-	CCDS18365.1	1	387	17	9.194	0.5	143.6	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000141248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000176162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000153119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000177394	ENSMUSP00000134881	TRANSLATION	protein_coding	stop	-	5	77	5	1.664	0	40.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000150830	ENSMUSP00000115546	TRANSLATION	protein_coding	stop	-	5	79	5	1.664	0	40.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000130541	ENSMUSP00000115688	TRANSLATION	protein_coding	start	-	5	175	7	3.83	0	77.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000079223	ENSMUSP00000078216	TRANSLATION	protein_coding	-	CCDS51233.1	5	552	23	14.224	6.4	259.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000028573	Fggy	ENSMUST00000147766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000156223	ENSMUSP00000118147	TRANSLATION	protein_coding	start	-	5	133	6	2.75	0	82.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000134012	ENSMUSP00000115859	TRANSLATION	protein_coding	stop	-	5	110	2	2.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000125742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028573	Fggy	ENSMUST00000143742	ENSMUSP00000117386	TRANSLATION	nonsense_mediated_decay	start	-	5	64	1	1.18	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000131654	ENSMUSP00000116264	TRANSLATION	nonsense_mediated_decay	-	-	5	103	5	1.4	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000142384	ENSMUSP00000123407	TRANSLATION	nonsense_mediated_decay	start	-	1	32	0	0.5	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000028573	Fggy	ENSMUST00000176840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038172	Ttc39b	ENSMUST00000048274	ENSMUSP00000040590	TRANSLATION	protein_coding	-	-	1	518	0	0	0	484.9	0	-4,-5	-	-	1.29	MINOR
ENSMUSG00000038172	Ttc39b	ENSMUST00000143362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038172	Ttc39b	ENSMUST00000150522	ENSMUSP00000124955	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	165.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038172	Ttc39b	ENSMUST00000146519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038172	Ttc39b	ENSMUST00000030205	ENSMUSP00000030205	TRANSLATION	protein_coding	-	-	1	209	0	0	0	89.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038172	Ttc39b	ENSMUST00000148811	ENSMUSP00000124490	TRANSLATION	protein_coding	-	-	3	179	0	0	0	89.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038172	Ttc39b	ENSMUST00000102823	ENSMUSP00000099887	TRANSLATION	protein_coding	-	CCDS18297.1	1	617	0	0	1.5	563.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078639	Gm12695	ENSMUST00000107071	ENSMUSP00000102686	TRANSLATION	protein_coding	-	CCDS38815.1	5	545	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000028496	Mllt3	ENSMUST00000078090	ENSMUSP00000077232	TRANSLATION	protein_coding	-	CCDS38796.1	1	569	0	5.66	6.5	91.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000028496	Mllt3	ENSMUST00000141526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028496	Mllt3	ENSMUST00000148059	ENSMUSP00000131095	TRANSLATION	protein_coding	-	-	5	54	0	1.33	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028496	Mllt3	ENSMUST00000142454	ENSMUSP00000127376	TRANSLATION	nonsense_mediated_decay	-	-	1	73	0	1	0	44.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028496	Mllt3	ENSMUST00000134555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028496	Mllt3	ENSMUST00000126353	ENSMUSP00000129523	TRANSLATION	protein_coding	-	CCDS71418.1	1	138	0	2.08	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028496	Mllt3	ENSMUST00000128930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028496	Mllt3	ENSMUST00000149357	ENSMUSP00000128366	TRANSLATION	protein_coding	-	CCDS38797.1	1	162	0	2.91	0.5	0	0	-4,-5	-	-	0.498	MINOR
ENSMUSG00000028807	Zbtb8a	ENSMUST00000030610	ENSMUSP00000030610	TRANSLATION	protein_coding	-	CCDS18690.1	1	434	7	1.56	0.5	94.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040569	Slc26a7	ENSMUST00000138042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040569	Slc26a7	ENSMUST00000143105	ENSMUSP00000122870	TRANSLATION	protein_coding	stop	-	3	99	0	1	0	41	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000040569	Slc26a7	ENSMUST00000042221	ENSMUSP00000041789	TRANSLATION	protein_coding	-	CCDS17979.1	1	656	0	2.42	8.8	370.9	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000040569	Slc26a7	ENSMUST00000149633	ENSMUSP00000116157	TRANSLATION	protein_coding	stop	-	3	200	0	1	0	105.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000028293	Slc35a1	ENSMUST00000126033	ENSMUSP00000119125	TRANSLATION	protein_coding	start/stop	-	3	250	0	0	0	280.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000028293	Slc35a1	ENSMUST00000151549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028293	Slc35a1	ENSMUST00000154020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028293	Slc35a1	ENSMUST00000029970	ENSMUSP00000029970	TRANSLATION	protein_coding	-	CCDS18030.1	1	336	0	0	10.8	407.4	9	-1,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000028293	Slc35a1	ENSMUST00000124456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049122	Frmd3	ENSMUST00000084474	ENSMUSP00000081514	TRANSLATION	protein_coding	-	CCDS38789.1	1	595	0	7.21	6.6	235.7	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000049122	Frmd3	ENSMUST00000098006	ENSMUSP00000095615	TRANSLATION	protein_coding	-	CCDS51212.1	1	554	0	7.21	2.9	235.7	0	-4,-1	-	-	12.678	MINOR
ENSMUSG00000049122	Frmd3	ENSMUST00000154134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039577	Nphp4	ENSMUST00000146223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039577	Nphp4	ENSMUST00000153759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039577	Nphp4	ENSMUST00000081393	ENSMUSP00000080128	TRANSLATION	protein_coding	-	CCDS38985.1	1	1425	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000039577	Nphp4	ENSMUST00000123635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039577	Nphp4	ENSMUST00000056567	ENSMUSP00000049920	TRANSLATION	protein_coding	-	CCDS38985.1	1	1425	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000039577	Nphp4	ENSMUST00000142027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000144235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000140585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000153766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000019677	ENSMUSP00000019677	TRANSLATION	protein_coding	-	CCDS18498.1	1	415	20	8.53	3.9	227.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028708	Mknk1	ENSMUST00000140315	ENSMUSP00000116410	TRANSLATION	protein_coding	stop	-	2	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028708	Mknk1	ENSMUST00000106513	ENSMUSP00000102123	TRANSLATION	protein_coding	-	CCDS18498.1	1	415	20	8.53	3.9	227.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000028708	Mknk1	ENSMUST00000130819	ENSMUSP00000118071	TRANSLATION	protein_coding	stop	-	3	141	13	3.83	0	67.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028708	Mknk1	ENSMUST00000152888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000150201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000155412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000154957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028708	Mknk1	ENSMUST00000151203	ENSMUSP00000114941	TRANSLATION	protein_coding	stop	-	3	114	9	3.08	0	51.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028708	Mknk1	ENSMUST00000144427	ENSMUSP00000117261	TRANSLATION	protein_coding	stop	-	5	101	9	2.58	0	35.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028708	Mknk1	ENSMUST00000135209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078512	Pramef6	ENSMUST00000105767	ENSMUSP00000101393	TRANSLATION	protein_coding	-	-	5	474	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000078512	Pramef6	ENSMUST00000081645	ENSMUSP00000080350	TRANSLATION	protein_coding	-	CCDS51358.1	5	469	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000078486	Perm1	ENSMUST00000105572	ENSMUSP00000101197	TRANSLATION	protein_coding	-	CCDS51406.1	1	807	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000111159	Olfr1337	ENSMUST00000077247	ENSMUSP00000076483	TRANSLATION	protein_coding	-	CCDS18561.1	-	315	0	0.42	4	176.2	0	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028437	Ubap1	ENSMUST00000136705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028437	Ubap1	ENSMUST00000154529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028437	Ubap1	ENSMUST00000108060	ENSMUSP00000103695	TRANSLATION	protein_coding	-	CCDS71361.1	1	441	0	2	1.5	0	0	-4,-5	-	-	4.19	MINOR
ENSMUSG00000028437	Ubap1	ENSMUST00000072866	ENSMUSP00000072643	TRANSLATION	protein_coding	-	CCDS51140.1	1	502	0	3	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028437	Ubap1	ENSMUST00000132235	ENSMUSP00000123491	TRANSLATION	protein_coding	start/stop	-	5	141	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063524	Eno1	ENSMUST00000136310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063524	Eno1	ENSMUST00000141931	ENSMUSP00000120059	TRANSLATION	protein_coding	stop	-	5	67	3	2.08	0	98.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063524	Eno1	ENSMUST00000133789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063524	Eno1	ENSMUST00000135063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063524	Eno1	ENSMUST00000080926	ENSMUSP00000079727	TRANSLATION	protein_coding	-	CCDS18971.1	1	434	14	10.08	19.5	722.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000063524	Eno1	ENSMUST00000130632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063524	Eno1	ENSMUST00000150175	ENSMUSP00000123695	TRANSLATION	protein_coding	stop	-	2	119	3	3.83	0	181.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063524	Eno1	ENSMUST00000080149	ENSMUSP00000079045	TRANSLATION	protein_coding	-	-	1	366	11	7.71	0	600.9	0	-4,-5	-	-	5.262	MINOR
ENSMUSG00000063524	Eno1	ENSMUST00000133839	ENSMUSP00000114361	TRANSLATION	protein_coding	stop	-	3	221	6	5.25	0	336.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063524	Eno1	ENSMUST00000151057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063524	Eno1	ENSMUST00000148605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043333	Rhbdl2	ENSMUST00000148797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043333	Rhbdl2	ENSMUST00000053202	ENSMUSP00000054546	TRANSLATION	protein_coding	-	CCDS38873.1	5	302	0	1.875	1.5	131.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043333	Rhbdl2	ENSMUST00000106204	ENSMUSP00000101810	TRANSLATION	protein_coding	-	CCDS38873.1	5	302	0	1.875	1.5	131.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043333	Rhbdl2	ENSMUST00000124290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043333	Rhbdl2	ENSMUST00000150286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066324	Impad1	ENSMUST00000084949	ENSMUSP00000082013	TRANSLATION	protein_coding	-	CCDS17947.1	1	356	12	2.64	1.5	137.4	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078713	Tomm5	ENSMUST00000107810	ENSMUSP00000103440	TRANSLATION	protein_coding	-	CCDS38751.1	1	51	0	0	19.5	122.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000078713	Tomm5	ENSMUST00000107807	ENSMUSP00000103437	TRANSLATION	protein_coding	-	-	2	43	0	0	2	91.5	0	-4,-5	-	-	4.374	MINOR
ENSMUSG00000078713	Tomm5	ENSMUST00000107808	ENSMUSP00000103438	TRANSLATION	protein_coding	-	CCDS51172.1	2	61	0	0	0.5	94.6	0	-4,-6	-	-	4.344	MINOR
ENSMUSG00000078713	Tomm5	ENSMUST00000107809	ENSMUSP00000103439	TRANSLATION	protein_coding	-	-	3	104	0	0	0	90	0	-4,-5	-	-	4.068	MINOR
ENSMUSG00000070934	Rraga	ENSMUST00000091064	ENSMUSP00000088591	TRANSLATION	protein_coding	-	CCDS18306.1	-	313	20	0.8	20.2	362.8	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000029028	Lrrc47	ENSMUST00000142794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029028	Lrrc47	ENSMUST00000030894	ENSMUSP00000030894	TRANSLATION	protein_coding	-	CCDS19006.1	1	581	0	3.31	1.5	104.1	0	-4,-7	-	-	11.4	PRINCIPAL:2
ENSMUSG00000029028	Lrrc47	ENSMUST00000167947	ENSMUSP00000131382	TRANSLATION	protein_coding	start	-	3	123	0	1.24	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029028	Lrrc47	ENSMUST00000163672	ENSMUSP00000126367	TRANSLATION	protein_coding	start	-	3	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029028	Lrrc47	ENSMUST00000169622	ENSMUSP00000133124	TRANSLATION	protein_coding	-	-	1	603	0	3.61	0	104.1	0	-2,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035649	Zcchc7	ENSMUST00000107824	ENSMUSP00000103454	TRANSLATION	protein_coding	-	CCDS18127.2	5	541	16	1.265	1.5	44.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035649	Zcchc7	ENSMUST00000154121	ENSMUSP00000131821	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035649	Zcchc7	ENSMUST00000126968	ENSMUSP00000125979	TRANSLATION	nonsense_mediated_decay	start	-	2	77	4	0.525	0	22.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035649	Zcchc7	ENSMUST00000143385	ENSMUSP00000131178	TRANSLATION	protein_coding	stop	-	2	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035649	Zcchc7	ENSMUST00000144436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035649	Zcchc7	ENSMUST00000147272	ENSMUSP00000126678	TRANSLATION	protein_coding	-	-	2	220	4	0.525	0	22.5	0	-4,-6	-	-	5.502	MINOR
ENSMUSG00000035649	Zcchc7	ENSMUST00000142714	ENSMUSP00000124542	TRANSLATION	nonsense_mediated_decay	-	-	2	261	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035649	Zcchc7	ENSMUST00000107823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035649	Zcchc7	ENSMUST00000067521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008932	Slc1a7	ENSMUST00000106713	ENSMUSP00000102324	TRANSLATION	protein_coding	-	-	1	559	13	7.81	4.8	419	9	-3,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000008932	Slc1a7	ENSMUST00000238795	ENSMUSP00000158982	TRANSLATION	protein_coding	-	CCDS18444.2	-	569	13	7.81	1.5	419	9	-4,-7	-	-	18.132	PRINCIPAL:2
ENSMUSG00000008932	Slc1a7	ENSMUST00000124190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054752	Fsd1l	ENSMUST00000107643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054752	Fsd1l	ENSMUST00000162270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054752	Fsd1l	ENSMUST00000180164	ENSMUSP00000136184	TRANSLATION	protein_coding	-	-	5	497	0	3.305	8.3	67.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000054752	Fsd1l	ENSMUST00000129648	ENSMUSP00000121176	TRANSLATION	nonsense_mediated_decay	-	-	1	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054752	Fsd1l	ENSMUST00000159415	ENSMUSP00000124002	TRANSLATION	protein_coding	stop	-	5	504	0	3.145	8.3	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054752	Fsd1l	ENSMUST00000132151	ENSMUSP00000114931	TRANSLATION	protein_coding	-	CCDS57276.1	5	497	0	3.305	8.3	67.8	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000054752	Fsd1l	ENSMUST00000163067	ENSMUSP00000124613	TRANSLATION	protein_coding	stop	-	5	493	0	3.145	8.3	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000143653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000207569	ENSMUSP00000147100	TRANSLATION	protein_coding	-	-	5	4390	15	25.485	0	527.2	0	-4,-2	-	-	18	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000145899	ENSMUSP00000128638	TRANSLATION	protein_coding	start/stop	-	5	189	0	5.025	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000127597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000153168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000168032	ENSMUSP00000132622	TRANSLATION	protein_coding	start/stop	-	3	256	8	2.6	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000107953	ENSMUSP00000103587	TRANSLATION	protein_coding	-	-	5	1609	15	25.485	6.5	527.2	0	-4,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000028456	Unc13b	ENSMUST00000151611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028456	Unc13b	ENSMUST00000171234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000207708	ENSMUSP00000146589	TRANSLATION	protein_coding	-	-	5	1982	15	21.075	0.5	488.9	0	-4,-5	-	-	9.702	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000126878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000149945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028456	Unc13b	ENSMUST00000132310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028456	Unc13b	ENSMUST00000107952	ENSMUSP00000103586	TRANSLATION	protein_coding	-	CCDS51161.1	1	1602	15	25.485	1.7	527.2	0	-4,-2	-	-	18.254	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000163653	ENSMUSP00000128608	TRANSLATION	protein_coding	-	CCDS38738.1	1	1601	15	25.485	1.7	526.2	0	-4,-2	-	-	18.194	MINOR
ENSMUSG00000028456	Unc13b	ENSMUST00000079978	ENSMUSP00000078894	TRANSLATION	protein_coding	-	CCDS80089.1	5	1590	15	25.485	5.3	527.2	0	-4,-2	-	-	19.564	PRINCIPAL:2
ENSMUSG00000041272	Tox	ENSMUST00000039987	ENSMUSP00000037966	TRANSLATION	protein_coding	-	CCDS17953.1	1	526	0	1.75	12.8	63.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041272	Tox	ENSMUST00000125974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041272	Tox	ENSMUST00000150082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041272	Tox	ENSMUST00000147657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028551	Cdkn2c	ENSMUST00000097921	ENSMUSP00000095534	TRANSLATION	protein_coding	-	CCDS18467.1	1	168	0	2	7.5	67.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028551	Cdkn2c	ENSMUST00000063531	ENSMUSP00000070313	TRANSLATION	protein_coding	-	CCDS18467.1	1	168	0	2	7.5	67.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047143	Dmrta2	ENSMUST00000061187	ENSMUSP00000060441	TRANSLATION	protein_coding	-	CCDS18469.1	1	531	8	0.6	0.5	151.3	0	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000028943	Espn	ENSMUST00000070018	ENSMUSP00000065545	TRANSLATION	protein_coding	-	CCDS18993.1	1	524	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000150958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028943	Espn	ENSMUST00000105659	ENSMUSP00000101284	TRANSLATION	protein_coding	-	-	5	881	0	5.8	0	178.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028943	Espn	ENSMUST00000105655	ENSMUSP00000101280	TRANSLATION	protein_coding	-	-	5	449	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000105657	ENSMUSP00000101282	TRANSLATION	protein_coding	-	CCDS18992.1	1	443	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000135185	ENSMUSP00000122464	TRANSLATION	protein_coding	start/stop	-	5	700	0	4.8	0	138.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000084114	ENSMUSP00000081131	TRANSLATION	protein_coding	-	CCDS18990.1	1	533	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000103196	ENSMUSP00000099485	TRANSLATION	protein_coding	-	-	5	440	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000080042	ENSMUSP00000078951	TRANSLATION	protein_coding	-	CCDS18991.1	1	452	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000148075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028943	Espn	ENSMUST00000207676	ENSMUSP00000147144	TRANSLATION	protein_coding	-	-	5	1405	0	5.8	0	178.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028943	Espn	ENSMUST00000105654	ENSMUSP00000101279	TRANSLATION	protein_coding	-	-	5	521	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000105653	ENSMUSP00000101278	TRANSLATION	protein_coding	-	-	5	285	0	0	0	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000030785	ENSMUSP00000030785	TRANSLATION	protein_coding	-	CCDS18989.1	1	871	0	5.8	0.5	178.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000028943	Espn	ENSMUST00000105656	ENSMUSP00000101281	TRANSLATION	protein_coding	-	-	5	530	0	0.8	0.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000156517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028943	Espn	ENSMUST00000049305	ENSMUSP00000037982	TRANSLATION	protein_coding	-	CCDS18994.1	1	253	0	0	1.5	26.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028943	Espn	ENSMUST00000105658	ENSMUSP00000101283	TRANSLATION	protein_coding	-	-	5	848	0	5.8	0.5	178.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000028943	Espn	ENSMUST00000136627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028943	Espn	ENSMUST00000137937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028229	Rmdn1	ENSMUST00000029888	ENSMUSP00000029888	TRANSLATION	protein_coding	-	CCDS17992.1	1	305	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:2
ENSMUSG00000028229	Rmdn1	ENSMUST00000108253	ENSMUSP00000103888	TRANSLATION	protein_coding	-	-	1	194	0	0	0	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000028641	P3h1	ENSMUST00000131875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000102662	ENSMUSP00000099723	TRANSLATION	protein_coding	-	CCDS18576.1	5	748	3	0	0.5	40.5	0	1,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000028641	P3h1	ENSMUST00000134548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000136278	ENSMUSP00000119695	TRANSLATION	nonsense_mediated_decay	-	-	5	363	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000028641	P3h1	ENSMUST00000123963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000142361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000030393	ENSMUSP00000030393	TRANSLATION	protein_coding	-	CCDS71460.1	1	746	3	0	0.5	40.5	0	1,-2	-	-	9	ALTERNATIVE:2
ENSMUSG00000028641	P3h1	ENSMUST00000126056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000081606	ENSMUSP00000080312	TRANSLATION	protein_coding	-	CCDS38860.1	1	560	3	0	0.5	40.5	0	-4,-5	-	-	9	ALTERNATIVE:2
ENSMUSG00000028641	P3h1	ENSMUST00000153940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028641	P3h1	ENSMUST00000121111	ENSMUSP00000112504	TRANSLATION	protein_coding	-	CCDS38859.1	1	739	3	0	0.5	40.5	0	1,-2	-	-	9	ALTERNATIVE:2
ENSMUSG00000028641	P3h1	ENSMUST00000127087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050395	Tnfsf15	ENSMUST00000062246	ENSMUSP00000050144	TRANSLATION	protein_coding	-	-	1	252	0	1.9	2.2	137.1	1	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000050395	Tnfsf15	ENSMUST00000239480	ENSMUSP00000159365	TRANSLATION	protein_coding	-	CCDS18263.2	-	270	0	1.9	0.5	137.1	1	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000028568	Btf3l4	ENSMUST00000125707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028568	Btf3l4	ENSMUST00000102742	ENSMUSP00000099803	TRANSLATION	protein_coding	-	CCDS18456.1	1	158	0	1.6	21.5	89	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028568	Btf3l4	ENSMUST00000102740	ENSMUSP00000099801	TRANSLATION	protein_coding	-	CCDS18456.1	5	158	0	1.6	21.5	89	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028568	Btf3l4	ENSMUST00000102739	ENSMUSP00000099800	TRANSLATION	protein_coding	-	CCDS18456.1	3	158	0	1.6	21.5	89	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028568	Btf3l4	ENSMUST00000102741	ENSMUSP00000099802	TRANSLATION	protein_coding	-	CCDS18456.1	1	158	0	1.6	21.5	89	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028568	Btf3l4	ENSMUST00000139464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066224	Arid3c	ENSMUST00000150809	ENSMUSP00000116411	TRANSLATION	protein_coding	-	CCDS57266.1	1	379	0	2.55	1.7	70.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000066224	Arid3c	ENSMUST00000171251	ENSMUSP00000127678	TRANSLATION	protein_coding	-	CCDS38719.1	5	409	0	2.55	1.7	70.7	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000066224	Arid3c	ENSMUST00000084698	ENSMUSP00000081748	TRANSLATION	protein_coding	-	CCDS38719.1	1	409	0	2.55	1.7	70.7	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000028214	Gem	ENSMUST00000029868	ENSMUSP00000029868	TRANSLATION	protein_coding	-	CCDS17971.1	2	295	14	3.75	3.9	108	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000028214	Gem	ENSMUST00000108304	ENSMUSP00000103939	TRANSLATION	protein_coding	-	CCDS17971.1	1	295	14	3.75	3.9	108	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000032643	Fhl3	ENSMUST00000038684	ENSMUSP00000040150	TRANSLATION	protein_coding	-	CCDS38874.1	1	289	35	5.3498	1.5	174.8	0	-4,-5	-	-	17.948	MINOR
ENSMUSG00000032643	Fhl3	ENSMUST00000106199	ENSMUSP00000101805	TRANSLATION	protein_coding	-	-	5	280	34	5.33	18	177.6	0	-4,-5	-	-	21.292	PRINCIPAL:1
ENSMUSG00000032643	Fhl3	ENSMUST00000145942	ENSMUSP00000121702	TRANSLATION	nonsense_mediated_decay	-	-	5	120	13	2	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028738	Tas1r2	ENSMUST00000030510	ENSMUSP00000030510	TRANSLATION	protein_coding	-	CCDS18849.1	1	843	0	4.56	1.5	475.3	7	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028738	Tas1r2	ENSMUST00000166773	ENSMUSP00000127737	TRANSLATION	protein_coding	-	-	1	814	0	4.08	0	425.8	7	3,-2	-	-	8.07	MINOR
ENSMUSG00000028975	Pex14	ENSMUST00000103217	ENSMUSP00000099506	TRANSLATION	protein_coding	-	CCDS18950.1	1	376	0	2.25	2.7	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028975	Pex14	ENSMUST00000148203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028975	Pex14	ENSMUST00000128067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028975	Pex14	ENSMUST00000134747	ENSMUSP00000116791	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028975	Pex14	ENSMUST00000154860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096826	Ccl27b	ENSMUST00000177785	ENSMUSP00000137284	TRANSLATION	protein_coding	-	CCDS51159.1	1	120	0	2	1.5	30.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028894	Inpp5b	ENSMUST00000145359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028894	Inpp5b	ENSMUST00000154229	ENSMUSP00000115176	TRANSLATION	protein_coding	stop	-	5	219	0	4.33	0	161.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028894	Inpp5b	ENSMUST00000135971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028894	Inpp5b	ENSMUST00000153837	ENSMUSP00000122568	TRANSLATION	protein_coding	stop	-	3	186	0	4.83	0	199.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028894	Inpp5b	ENSMUST00000184454	ENSMUSP00000139221	TRANSLATION	nonsense_mediated_decay	-	-	1	825	6	15.23	0	251.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028894	Inpp5b	ENSMUST00000142652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028894	Inpp5b	ENSMUST00000094782	ENSMUSP00000092375	TRANSLATION	protein_coding	-	CCDS38876.1	1	993	6	19.26	0.5	341.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028894	Inpp5b	ENSMUST00000142446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037295	Ldlrap1	ENSMUST00000037828	ENSMUSP00000036749	TRANSLATION	protein_coding	-	CCDS51327.1	1	308	0	3.9	7.5	65.9	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000037295	Ldlrap1	ENSMUST00000140678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037295	Ldlrap1	ENSMUST00000148479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094293	Gm3893	ENSMUST00000178882	ENSMUSP00000137057	TRANSLATION	protein_coding	-	-	5	302	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000029049	Morn1	ENSMUST00000155375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029049	Morn1	ENSMUST00000155775	ENSMUSP00000123207	TRANSLATION	protein_coding	stop	-	5	124	0	0.772	0	91.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029049	Morn1	ENSMUST00000129415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029049	Morn1	ENSMUST00000151710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029049	Morn1	ENSMUST00000132367	ENSMUSP00000116794	TRANSLATION	nonsense_mediated_decay	-	-	1	254	0	1.572	0.5	170.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029049	Morn1	ENSMUST00000030915	ENSMUSP00000030915	TRANSLATION	protein_coding	-	CCDS38991.1	1	477	0	1.572	0.5	166.4	0	-4,-7	-	-	11.778	PRINCIPAL:1
ENSMUSG00000029049	Morn1	ENSMUST00000129180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029049	Morn1	ENSMUST00000127457	ENSMUSP00000116690	TRANSLATION	protein_coding	stop	-	3	214	0	1.572	0	158.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028476	Reck	ENSMUST00000128463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028476	Reck	ENSMUST00000130415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028476	Reck	ENSMUST00000030198	ENSMUSP00000030198	TRANSLATION	protein_coding	-	CCDS18116.1	1	971	0	0	6.3	58.2	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000028443	Nudt2	ENSMUST00000030154	ENSMUSP00000030154	TRANSLATION	protein_coding	-	CCDS18061.1	1	147	10	2	8.8	78.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000078746	Fam205a4	ENSMUST00000108026	ENSMUSP00000103661	TRANSLATION	protein_coding	-	-	5	1308	0	0	0.5	122.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028591	Pramef12	ENSMUST00000030326	ENSMUSP00000030326	TRANSLATION	protein_coding	-	CCDS18905.1	1	463	0	0	0.5	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000028591	Pramef12	ENSMUST00000123854	ENSMUSP00000119614	TRANSLATION	protein_coding	stop	-	2	132	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000040359	Ufl1	ENSMUST00000132558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040359	Ufl1	ENSMUST00000102994	ENSMUSP00000100059	TRANSLATION	protein_coding	-	CCDS18010.1	1	793	0	0	3.9	382.8	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000040359	Ufl1	ENSMUST00000142949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040359	Ufl1	ENSMUST00000038705	ENSMUSP00000042118	TRANSLATION	protein_coding	-	-	1	713	0	0	1.2	241.5	0	-4,-5	-	-	0.069	MINOR
ENSMUSG00000046312	Myorg	ENSMUST00000054920	ENSMUSP00000059038	TRANSLATION	protein_coding	-	CCDS38716.1	1	716	0	0.28	2.7	184.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046312	Myorg	ENSMUST00000149596	ENSMUSP00000122357	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028681	Ptch2	ENSMUST00000135133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028681	Ptch2	ENSMUST00000123226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028681	Ptch2	ENSMUST00000030443	ENSMUSP00000030443	TRANSLATION	protein_coding	-	CCDS18526.1	1	1182	0	3.5	1.5	260.5	9	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028681	Ptch2	ENSMUST00000156989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028681	Ptch2	ENSMUST00000144620	ENSMUSP00000122548	TRANSLATION	nonsense_mediated_decay	-	-	1	337	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000028681	Ptch2	ENSMUST00000137209	ENSMUSP00000114461	TRANSLATION	nonsense_mediated_decay	start	-	3	170	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028383	Hsdl2	ENSMUST00000107528	ENSMUSP00000103152	TRANSLATION	protein_coding	-	CCDS80104.1	2	370	13	7.05	0.5	118.6	0	-4,-2	-	-	0.492	MINOR
ENSMUSG00000028383	Hsdl2	ENSMUST00000030078	ENSMUSP00000030078	TRANSLATION	protein_coding	-	CCDS38772.1	1	490	28	10.13	0.5	210.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000028383	Hsdl2	ENSMUST00000128792	ENSMUSP00000119139	TRANSLATION	protein_coding	stop	-	2	149	17	4.514	0	56.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053730	Tmem39b	ENSMUST00000125445	ENSMUSP00000121505	TRANSLATION	nonsense_mediated_decay	-	-	1	131	0	0	0	121.8	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000053730	Tmem39b	ENSMUST00000147668	ENSMUSP00000120048	TRANSLATION	nonsense_mediated_decay	-	-	3	128	0	0	0	120.6	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000053730	Tmem39b	ENSMUST00000137640	ENSMUSP00000115156	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	77.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053730	Tmem39b	ENSMUST00000154747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053730	Tmem39b	ENSMUST00000102588	ENSMUSP00000099648	TRANSLATION	protein_coding	-	CCDS18702.1	1	492	0	0	6.3	679.7	3	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000028890	Mtf1	ENSMUST00000106193	ENSMUSP00000101799	TRANSLATION	protein_coding	-	CCDS18627.1	5	675	24	3.314	1.5	120.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028890	Mtf1	ENSMUST00000030723	ENSMUSP00000030723	TRANSLATION	protein_coding	-	CCDS18627.1	1	675	24	3.314	1.5	120.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028890	Mtf1	ENSMUST00000138807	ENSMUSP00000119352	TRANSLATION	protein_coding	stop	-	5	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028890	Mtf1	ENSMUST00000147452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028890	Mtf1	ENSMUST00000175875	ENSMUSP00000135260	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059816	Shisal2a	ENSMUST00000053157	ENSMUSP00000060463	TRANSLATION	protein_coding	-	CCDS38833.1	5	189	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000041735	AAdacl4fm3	ENSMUST00000036876	ENSMUSP00000045343	TRANSLATION	protein_coding	-	CCDS38958.1	5	408	3	1.33	3.9	0	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000041735	AAdacl4fm3	ENSMUST00000209924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057637	Prdm2	ENSMUST00000154280	ENSMUSP00000117741	TRANSLATION	protein_coding	stop	-	5	169	0	4.08	0	38.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057637	Prdm2	ENSMUST00000156909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057637	Prdm2	ENSMUST00000105778	ENSMUSP00000101404	TRANSLATION	protein_coding	-	CCDS38942.2	5	1709	30	4.146	0.5	101	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057637	Prdm2	ENSMUST00000134791	ENSMUSP00000116458	TRANSLATION	protein_coding	stop	-	1	152	0	3.75	0	38.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028927	Padi2	ENSMUST00000130958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028927	Padi2	ENSMUST00000148160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028927	Padi2	ENSMUST00000030765	ENSMUSP00000030765	TRANSLATION	protein_coding	-	CCDS18857.1	1	673	22	15.25	0.5	911.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000070983	Olfr270	ENSMUST00000172257	ENSMUSP00000133100	TRANSLATION	protein_coding	-	CCDS51176.1	-	312	0	0.42	6.4	181.4	7	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000070983	Olfr270	ENSMUST00000095084	ENSMUSP00000092699	TRANSLATION	protein_coding	-	-	5	314	0	0.42	6.4	181.4	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000070983	Olfr270	ENSMUST00000215010	ENSMUSP00000150409	TRANSLATION	protein_coding	-	-	5	314	0	0.42	6.4	181.4	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000070983	Olfr270	ENSMUST00000215127	ENSMUSP00000150038	TRANSLATION	protein_coding	-	-	5	314	0	0.42	6.4	181.4	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000028801	Stpg1	ENSMUST00000153891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028801	Stpg1	ENSMUST00000123221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028801	Stpg1	ENSMUST00000063707	ENSMUSP00000067647	TRANSLATION	protein_coding	-	CCDS18787.1	1	341	0	0	0.5	54.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070637	Srarp	ENSMUST00000094544	ENSMUSP00000092122	TRANSLATION	protein_coding	-	CCDS51347.1	1	163	0	0	0.5	194	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028247	Coq3	ENSMUST00000142244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028247	Coq3	ENSMUST00000029909	ENSMUSP00000029909	TRANSLATION	protein_coding	-	CCDS18003.1	1	370	18	3.08	2.9	72.4	0	-1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000078517	Emc1	ENSMUST00000155700	ENSMUSP00000152874	TRANSLATION	nonsense_mediated_decay	start	-	1	320	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000078517	Emc1	ENSMUST00000144335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078517	Emc1	ENSMUST00000179784	ENSMUSP00000137103	TRANSLATION	protein_coding	-	CCDS38933.1	1	997	0	0	3.9	250.4	1	4,-1	-	-	7	ALTERNATIVE:2
ENSMUSG00000078517	Emc1	ENSMUST00000082262	ENSMUSP00000080888	TRANSLATION	protein_coding	-	-	1	997	0	0	3.9	250.4	1	4,-1	-	-	7	ALTERNATIVE:2
ENSMUSG00000078517	Emc1	ENSMUST00000042096	ENSMUSP00000049034	TRANSLATION	protein_coding	-	CCDS18846.1	1	994	0	0	2.7	250.4	1	4,-1	-	-	6.586	PRINCIPAL:3
ENSMUSG00000000682	Cd52	ENSMUST00000137445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000682	Cd52	ENSMUST00000000696	ENSMUSP00000000696	TRANSLATION	protein_coding	-	CCDS38909.1	1	74	0	0	0.5	74.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000000682	Cd52	ENSMUST00000145122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028898	Trnau1ap	ENSMUST00000144387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028898	Trnau1ap	ENSMUST00000146166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028898	Trnau1ap	ENSMUST00000127402	ENSMUSP00000120657	TRANSLATION	protein_coding	stop	-	5	146	0	3.61	0	47	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028898	Trnau1ap	ENSMUST00000105962	ENSMUSP00000101582	TRANSLATION	protein_coding	-	-	5	247	0	4.73	3.6	47	0	-4,-5	-	-	7.816	MINOR
ENSMUSG00000028898	Trnau1ap	ENSMUST00000141317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028898	Trnau1ap	ENSMUST00000150959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028898	Trnau1ap	ENSMUST00000147652	ENSMUSP00000127273	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	2.778	0	47	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028898	Trnau1ap	ENSMUST00000137520	ENSMUSP00000127767	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028898	Trnau1ap	ENSMUST00000125513	ENSMUSP00000126492	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028898	Trnau1ap	ENSMUST00000030730	ENSMUSP00000030730	TRANSLATION	protein_coding	-	CCDS18722.1	1	287	0	5.73	12.8	96.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028898	Trnau1ap	ENSMUST00000131524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028898	Trnau1ap	ENSMUST00000105960	ENSMUSP00000101580	TRANSLATION	protein_coding	stop	-	3	70	0	2.16	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028712	Cyp4a31	ENSMUST00000030486	ENSMUSP00000030486	TRANSLATION	protein_coding	-	CCDS51273.1	5	509	30	11.66	1.5	441.7	1	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000028712	Cyp4a31	ENSMUST00000141033	ENSMUSP00000115628	TRANSLATION	protein_coding	stop	-	3	155	5	2.45	0	57	1	0,-3	-	-	-1	MINOR
ENSMUSG00000028712	Cyp4a31	ENSMUST00000030480	ENSMUSP00000030480	TRANSLATION	protein_coding	-	CCDS57291.1	2	443	26	9.065	0.5	320.8	1	0,-3	-	-	4.146	MINOR
ENSMUSG00000028712	Cyp4a31	ENSMUST00000126645	ENSMUSP00000117129	TRANSLATION	protein_coding	stop	-	5	340	13	6.75	0	216.8	1	0,-3	-	-	-1	MINOR
ENSMUSG00000058935	Tex48	ENSMUST00000102861	ENSMUSP00000099925	TRANSLATION	protein_coding	-	CCDS18262.1	1	110	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000058935	Tex48	ENSMUST00000102862	ENSMUSP00000099926	TRANSLATION	protein_coding	-	CCDS18262.1	1	110	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000037188	Grhl3	ENSMUST00000105855	ENSMUSP00000101481	TRANSLATION	protein_coding	-	CCDS38920.1	1	603	0	0	7.5	262.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000000085	Scmh1	ENSMUST00000151345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000133290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000134375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000132116	ENSMUSP00000115343	TRANSLATION	protein_coding	stop	-	5	28	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000000085	Scmh1	ENSMUST00000106298	ENSMUSP00000101905	TRANSLATION	protein_coding	-	CCDS18589.1	1	664	0	7.1	1.5	390.8	0	-3,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000000085	Scmh1	ENSMUST00000144862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000000087	ENSMUSP00000000087	TRANSLATION	protein_coding	-	CCDS18589.1	1	664	0	7.1	1.5	390.8	0	-3,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000000085	Scmh1	ENSMUST00000122860	ENSMUSP00000120950	TRANSLATION	protein_coding	start/stop	-	3	177	0	0.8	0	67.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000085	Scmh1	ENSMUST00000136801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000106301	ENSMUSP00000101908	TRANSLATION	protein_coding	-	CCDS51292.1	1	706	0	7.1	0.5	390.8	0	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000000085	Scmh1	ENSMUST00000064991	ENSMUSP00000069813	TRANSLATION	protein_coding	-	CCDS51292.1	5	706	0	7.1	0.5	390.8	0	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000000085	Scmh1	ENSMUST00000153099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000144555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000085	Scmh1	ENSMUST00000133169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028544	Slc5a9	ENSMUST00000131772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028544	Slc5a9	ENSMUST00000128224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028544	Slc5a9	ENSMUST00000102720	ENSMUSP00000099781	TRANSLATION	protein_coding	-	CCDS18474.1	1	685	0	6.92	0.5	499.8	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028544	Slc5a9	ENSMUST00000149922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028544	Slc5a9	ENSMUST00000128340	ENSMUSP00000120546	TRANSLATION	protein_coding	start/stop	-	3	255	0	3.46	0	227.8	7	-2,-5	-	-	-1	MINOR
ENSMUSG00000028544	Slc5a9	ENSMUST00000154838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028544	Slc5a9	ENSMUST00000102719	ENSMUSP00000099780	TRANSLATION	protein_coding	-	CCDS18474.1	1	685	0	6.92	0.5	499.8	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000028544	Slc5a9	ENSMUST00000102721	ENSMUSP00000099782	TRANSLATION	protein_coding	-	CCDS18474.1	1	685	0	6.92	0.5	499.8	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036822	Topors	ENSMUST00000042575	ENSMUSP00000046843	TRANSLATION	protein_coding	-	CCDS38710.1	1	1033	8	0	0.5	41	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023267	Gabrr2	ENSMUST00000147889	ENSMUSP00000114337	TRANSLATION	protein_coding	start	-	3	221	4	4.38	0	196.7	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000023267	Gabrr2	ENSMUST00000108162	ENSMUSP00000103797	TRANSLATION	protein_coding	-	-	1	465	5	6.53	4.6	282	7	4,-1	-	-	18	ALTERNATIVE:1
ENSMUSG00000023267	Gabrr2	ENSMUST00000131920	ENSMUSP00000118514	TRANSLATION	protein_coding	stop	-	5	203	5	4.05	0	179.4	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000023267	Gabrr2	ENSMUST00000024035	ENSMUSP00000024035	TRANSLATION	protein_coding	-	CCDS18020.1	1	490	5	6.53	0.5	282	7	-3,-6	-	-	17	PRINCIPAL:2
ENSMUSG00000029072	Tas1r3	ENSMUST00000030949	ENSMUSP00000030949	TRANSLATION	protein_coding	-	CCDS19046.1	1	858	0	3.9	1.5	401.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055900	Tmem69	ENSMUST00000069674	ENSMUSP00000065821	TRANSLATION	protein_coding	-	CCDS51277.1	2	245	0	0	2.7	113.7	4	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000055900	Tmem69	ENSMUST00000106478	ENSMUSP00000102087	TRANSLATION	protein_coding	-	CCDS51277.1	1	245	0	0	2.7	113.7	4	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000055900	Tmem69	ENSMUST00000129201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028778	Hcrtr1	ENSMUST00000119423	ENSMUSP00000112630	TRANSLATION	protein_coding	-	CCDS18707.1	5	416	0	5.72	1.5	186.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028778	Hcrtr1	ENSMUST00000164887	ENSMUSP00000127290	TRANSLATION	protein_coding	-	CCDS18707.1	5	416	0	5.72	1.5	186.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028778	Hcrtr1	ENSMUST00000030562	ENSMUSP00000030562	TRANSLATION	protein_coding	-	CCDS18707.1	1	416	0	5.72	1.5	186.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028778	Hcrtr1	ENSMUST00000120154	ENSMUSP00000113198	TRANSLATION	protein_coding	-	CCDS18707.1	1	416	0	5.72	1.5	186.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078365	Mos	ENSMUST00000105158	ENSMUSP00000100789	TRANSLATION	protein_coding	-	CCDS38685.1	-	343	21	0.42	1.5	144.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000062478	Ctrc	ENSMUST00000153282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062478	Ctrc	ENSMUST00000105781	ENSMUSP00000101407	TRANSLATION	protein_coding	-	-	1	235	4	4.75	0	151.7	0	1,-2	-	-	10.798	MINOR
ENSMUSG00000062478	Ctrc	ENSMUST00000136064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062478	Ctrc	ENSMUST00000176781	ENSMUSP00000135842	TRANSLATION	nonsense_mediated_decay	start	-	3	78	0	0.75	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000062478	Ctrc	ENSMUST00000037059	ENSMUSP00000039879	TRANSLATION	protein_coding	-	-	5	267	5	5.75	6.3	205.1	0	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000036749	Pramel5	ENSMUST00000133357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036749	Pramel5	ENSMUST00000105752	ENSMUSP00000101378	TRANSLATION	protein_coding	-	CCDS51363.1	5	500	0	0.16	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036749	Pramel5	ENSMUST00000144127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036749	Pramel5	ENSMUST00000035757	ENSMUSP00000044222	TRANSLATION	protein_coding	-	CCDS51363.1	1	500	0	0.16	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000006395	Hyi	ENSMUST00000106393	ENSMUSP00000102001	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006395	Hyi	ENSMUST00000194248	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000006395	Hyi	ENSMUST00000179719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006395	Hyi	ENSMUST00000132882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006395	Hyi	ENSMUST00000006562	ENSMUSP00000006562	TRANSLATION	protein_coding	-	-	5	267	5	4.85	0	90.9	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000078491	Gm13090	ENSMUST00000105667	ENSMUSP00000101292	TRANSLATION	protein_coding	-	CCDS84827.1	3	111	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000078485	Plekhn1	ENSMUST00000217885	ENSMUSP00000151799	TRANSLATION	protein_coding	-	-	5	610	0	1.195	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078485	Plekhn1	ENSMUST00000105569	ENSMUSP00000101194	TRANSLATION	protein_coding	-	CCDS38999.1	1	640	0	9.99	7.5	497.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078485	Plekhn1	ENSMUST00000105571	ENSMUSP00000101196	TRANSLATION	protein_coding	-	CCDS51407.1	5	611	0	1.195	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078485	Plekhn1	ENSMUST00000218699	ENSMUSP00000151311	TRANSLATION	protein_coding	-	-	2	571	0	1.195	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078485	Plekhn1	ENSMUST00000219227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051593	Olfr272	ENSMUST00000213989	ENSMUSP00000149339	TRANSLATION	protein_coding	-	CCDS18185.1	5	319	0	0.16	5.1	183.7	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051593	Olfr272	ENSMUST00000107667	ENSMUSP00000103294	TRANSLATION	protein_coding	-	CCDS18185.1	3	319	0	0.16	5.1	183.7	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051593	Olfr272	ENSMUST00000217085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051593	Olfr272	ENSMUST00000051600	ENSMUSP00000055721	TRANSLATION	protein_coding	-	CCDS18185.1	-	319	0	0.16	5.1	183.7	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000028540	Dph2	ENSMUST00000030265	ENSMUSP00000030265	TRANSLATION	protein_coding	-	CCDS18541.1	1	489	0	1.95	7.5	216	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028540	Dph2	ENSMUST00000126554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028540	Dph2	ENSMUST00000139332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028540	Dph2	ENSMUST00000183773	ENSMUSP00000138948	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041333	Mup4	ENSMUST00000075973	ENSMUSP00000075356	TRANSLATION	protein_coding	-	CCDS18228.1	1	178	0	5.08	0.5	122.3	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059482	2610301B20Rik	ENSMUST00000080517	ENSMUSP00000079361	TRANSLATION	protein_coding	-	CCDS17961.1	1	209	0	0	1.7	192.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000059482	2610301B20Rik	ENSMUST00000101504	ENSMUSP00000103966	TRANSLATION	protein_coding	-	-	5	210	0	0	1.7	187.1	0	-4,-5	-	-	5.664	ALTERNATIVE:2
ENSMUSG00000059482	2610301B20Rik	ENSMUST00000131437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059482	2610301B20Rik	ENSMUST00000142026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059482	2610301B20Rik	ENSMUST00000156124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052684	Jun	ENSMUST00000107094	ENSMUSP00000102711	TRANSLATION	protein_coding	-	CCDS18364.1	-	334	0	0.4	3.9	395	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000028745	Capzb	ENSMUST00000150077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028745	Capzb	ENSMUST00000102507	ENSMUSP00000099565	TRANSLATION	protein_coding	-	CCDS18842.1	1	277	0	7.83	10.8	369.8	0	-4,-5	-	-	15.324	PRINCIPAL:4
ENSMUSG00000028745	Capzb	ENSMUST00000131912	ENSMUSP00000114973	TRANSLATION	protein_coding	stop	-	2	188	0	3.33	0	207.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028745	Capzb	ENSMUST00000042675	ENSMUSP00000038011	TRANSLATION	protein_coding	-	-	1	260	0	6.95	1.3	359.4	0	-4,-6	-	-	9.718	MINOR
ENSMUSG00000028745	Capzb	ENSMUST00000030518	ENSMUSP00000030518	TRANSLATION	protein_coding	-	CCDS71503.1	1	301	0	7.28	6.3	369.8	0	-4,-2	-	-	12.698	MINOR
ENSMUSG00000028745	Capzb	ENSMUST00000131793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028745	Capzb	ENSMUST00000132385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028745	Capzb	ENSMUST00000138045	ENSMUSP00000122077	TRANSLATION	protein_coding	stop	-	3	204	0	5.75	0	315.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028745	Capzb	ENSMUST00000156760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028745	Capzb	ENSMUST00000102508	ENSMUSP00000099566	TRANSLATION	protein_coding	-	CCDS18841.1	1	272	0	7.28	12.8	369.8	0	-4,-5	-	-	14.902	ALTERNATIVE:1
ENSMUSG00000028745	Capzb	ENSMUST00000145368	ENSMUSP00000119252	TRANSLATION	protein_coding	stop	-	5	109	0	2.83	1.2	169.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040728	Esrp1	ENSMUST00000147342	ENSMUSP00000121117	TRANSLATION	protein_coding	start	-	5	467	0	5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040728	Esrp1	ENSMUST00000155519	ENSMUSP00000119598	TRANSLATION	protein_coding	start	-	1	500	0	4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040728	Esrp1	ENSMUST00000108313	ENSMUSP00000103949	TRANSLATION	protein_coding	-	CCDS84703.1	5	604	0	5	9.6	0	0	-2,-4	-	-	9	ALTERNATIVE:1
ENSMUSG00000040728	Esrp1	ENSMUST00000108310	ENSMUSP00000103946	TRANSLATION	protein_coding	-	-	5	677	0	5	7.6	0	0	-2,-4	-	-	8.301	ALTERNATIVE:1
ENSMUSG00000040728	Esrp1	ENSMUST00000108311	ENSMUSP00000103947	TRANSLATION	protein_coding	-	CCDS51119.1	5	681	0	5	7.6	0	0	-2,-4	-	-	8.301	PRINCIPAL:3
ENSMUSG00000040728	Esrp1	ENSMUST00000043781	ENSMUSP00000037921	TRANSLATION	protein_coding	-	-	5	659	0	5	7.6	0	0	-2,-4	-	-	8.301	ALTERNATIVE:1
ENSMUSG00000040728	Esrp1	ENSMUST00000127399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070803	Cited4	ENSMUST00000094814	ENSMUSP00000092408	TRANSLATION	protein_coding	-	CCDS18592.1	-	182	0	0.2	0.5	67.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028798	Eif3i	ENSMUST00000136843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028798	Eif3i	ENSMUST00000135055	ENSMUSP00000120776	TRANSLATION	protein_coding	stop	-	2	165	0	4.25	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028798	Eif3i	ENSMUST00000155428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028798	Eif3i	ENSMUST00000143384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028798	Eif3i	ENSMUST00000102593	ENSMUSP00000099653	TRANSLATION	protein_coding	-	CCDS18698.1	1	325	0	9.25	21.5	66.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000094065	Ccl21d	ENSMUST00000098128	ENSMUSP00000095732	TRANSLATION	protein_coding	-	CCDS57267.1	1	133	0	2.33	3.9	83.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000038007	Acer2	ENSMUST00000084433	ENSMUSP00000081473	TRANSLATION	protein_coding	-	CCDS71417.1	1	229	0	0	3.9	171	5	-4,-7	-	-	5.734	MINOR
ENSMUSG00000038007	Acer2	ENSMUST00000135874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038007	Acer2	ENSMUST00000045224	ENSMUSP00000040048	TRANSLATION	protein_coding	-	CCDS18311.1	1	275	0	0	16.3	188.1	7	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000038007	Acer2	ENSMUST00000128712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047281	Sfn	ENSMUST00000057311	ENSMUSP00000050374	TRANSLATION	protein_coding	-	CCDS18754.1	-	248	0	1	7.9	341	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047187	Rab2a	ENSMUST00000060232	ENSMUSP00000057664	TRANSLATION	protein_coding	-	CCDS17955.1	1	212	22	5.98	17.3	211.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000095567	Noc2l	ENSMUST00000179886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095567	Noc2l	ENSMUST00000179543	ENSMUSP00000137253	TRANSLATION	protein_coding	-	CCDS57322.1	1	750	0	0	0.5	416.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095567	Noc2l	ENSMUST00000238213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095567	Noc2l	ENSMUST00000238476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095567	Noc2l	ENSMUST00000238320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096700	Gm11236	ENSMUST00000180092	ENSMUSP00000136433	TRANSLATION	protein_coding	-	-	1	360	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000028378	Ptgr1	ENSMUST00000030069	ENSMUSP00000030069	TRANSLATION	protein_coding	-	CCDS18215.1	1	329	25	8	7.5	213.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036995	Asap3	ENSMUST00000047526	ENSMUSP00000041899	TRANSLATION	protein_coding	-	CCDS18802.1	1	904	4	11.81	1.5	257.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000028478	Clta	ENSMUST00000107847	ENSMUSP00000103479	TRANSLATION	protein_coding	-	CCDS71377.1	5	230	0	2.9	5.1	192.9	0	-4,-5	-	-	12.338	MINOR
ENSMUSG00000028478	Clta	ENSMUST00000170241	ENSMUSP00000127344	TRANSLATION	protein_coding	-	CCDS38748.1	1	218	0	2.9	5.1	203	0	-4,-5	-	-	12.944	ALTERNATIVE:1
ENSMUSG00000028478	Clta	ENSMUST00000107846	ENSMUSP00000103478	TRANSLATION	protein_coding	-	CCDS38748.1	1	218	0	2.9	5.1	203	0	-4,-5	-	-	12.944	ALTERNATIVE:1
ENSMUSG00000028478	Clta	ENSMUST00000107845	ENSMUSP00000103477	TRANSLATION	protein_coding	-	CCDS38749.1	2	216	0	2.9	5.1	203.9	0	-4,-5	-	-	12.998	ALTERNATIVE:1
ENSMUSG00000028478	Clta	ENSMUST00000107851	ENSMUSP00000103483	TRANSLATION	protein_coding	-	CCDS38746.1	2	248	0	3.4	5.1	191.5	0	-4,-5	-	-	13.256	ALTERNATIVE:1
ENSMUSG00000028478	Clta	ENSMUST00000107849	ENSMUSP00000103481	TRANSLATION	protein_coding	-	CCDS38747.1	1	236	0	3.4	5.1	195.1	0	-4,-5	-	-	13.472	PRINCIPAL:4
ENSMUSG00000029055	Plch2	ENSMUST00000176620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029055	Plch2	ENSMUST00000135665	ENSMUSP00000118292	TRANSLATION	protein_coding	-	-	5	1396	15	12.626	0	513.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029055	Plch2	ENSMUST00000176194	ENSMUSP00000134750	TRANSLATION	protein_coding	-	-	5	1137	15	12.626	0	513.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029055	Plch2	ENSMUST00000105631	ENSMUSP00000101256	TRANSLATION	protein_coding	-	CCDS71533.1	5	1501	15	12.626	0.5	512.5	0	-4,-2	-	-	17.958	ALTERNATIVE:2
ENSMUSG00000029055	Plch2	ENSMUST00000124517	ENSMUSP00000122139	TRANSLATION	protein_coding	start	-	5	199	4	1.9	0	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029055	Plch2	ENSMUST00000139976	ENSMUSP00000122704	TRANSLATION	protein_coding	-	CCDS38990.2	1	1238	15	12.626	0.5	512.5	0	-4,-2	-	-	17.958	PRINCIPAL:3
ENSMUSG00000029055	Plch2	ENSMUST00000186598	ENSMUSP00000141152	TRANSLATION	protein_coding	-	-	5	493	5	3.61	0	53.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029055	Plch2	ENSMUST00000175982	ENSMUSP00000135209	TRANSLATION	protein_coding	start	-	5	1250	15	9.724	0	411	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029055	Plch2	ENSMUST00000126098	ENSMUSP00000115440	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029055	Plch2	ENSMUST00000127661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029055	Plch2	ENSMUST00000145662	ENSMUSP00000119864	TRANSLATION	protein_coding	-	-	1	599	7	8.462	0	316.9	0	-4,-2	-	-	0.666	MINOR
ENSMUSG00000029055	Plch2	ENSMUST00000131173	ENSMUSP00000118629	TRANSLATION	protein_coding	stop	-	3	111	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028709	Mob3c	ENSMUST00000144839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028709	Mob3c	ENSMUST00000030477	ENSMUSP00000030477	TRANSLATION	protein_coding	-	CCDS18497.1	1	216	4	3.198	21.5	252	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000028709	Mob3c	ENSMUST00000148409	ENSMUSP00000123611	TRANSLATION	protein_coding	stop	-	3	90	2	1	0	69.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028706	Nsun4	ENSMUST00000165493	ENSMUSP00000130430	TRANSLATION	protein_coding	-	-	2	806	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028706	Nsun4	ENSMUST00000136655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028706	Nsun4	ENSMUST00000152712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028706	Nsun4	ENSMUST00000030474	ENSMUSP00000030474	TRANSLATION	nonsense_mediated_decay	start	-	1	57	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028706	Nsun4	ENSMUST00000151720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028706	Nsun4	ENSMUST00000030475	ENSMUSP00000030475	TRANSLATION	protein_coding	-	CCDS18502.1	1	381	19	6.2	3.9	98.4	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000040410	Fbxl4	ENSMUST00000184582	ENSMUSP00000139158	TRANSLATION	nonsense_mediated_decay	-	-	1	582	0	2.5	0.5	34.3	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000040410	Fbxl4	ENSMUST00000185029	ENSMUSP00000138825	TRANSLATION	nonsense_mediated_decay	-	-	1	466	0	1.9	0	34.3	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000040410	Fbxl4	ENSMUST00000039234	ENSMUSP00000042219	TRANSLATION	protein_coding	-	CCDS18004.1	1	621	0	2.9	9.5	34.3	0	-2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000040410	Fbxl4	ENSMUST00000131972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040410	Fbxl4	ENSMUST00000184455	ENSMUSP00000138841	TRANSLATION	nonsense_mediated_decay	-	-	1	290	0	0	1	0	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000028294	Cfap206	ENSMUST00000029971	ENSMUSP00000029971	TRANSLATION	protein_coding	-	CCDS84713.1	5	622	0	0	6.3	350.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000028294	Cfap206	ENSMUST00000160209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028294	Cfap206	ENSMUST00000137514	ENSMUSP00000116947	TRANSLATION	protein_coding	stop	-	5	210	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028294	Cfap206	ENSMUST00000162495	ENSMUSP00000124760	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028294	Cfap206	ENSMUST00000108136	ENSMUSP00000103771	TRANSLATION	protein_coding	-	CCDS18031.2	1	504	0	0	0.5	350.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000028294	Cfap206	ENSMUST00000135563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028736	Pax7	ENSMUST00000030508	ENSMUSP00000030508	TRANSLATION	protein_coding	-	CCDS18850.1	1	503	0	4	7.1	396.3	0	-4,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000028736	Pax7	ENSMUST00000174681	ENSMUSP00000133536	TRANSLATION	protein_coding	-	-	5	505	0	4	7.1	389.2	0	-4,-2	-	-	14.574	ALTERNATIVE:1
ENSMUSG00000044556	Tex38	ENSMUST00000106521	ENSMUSP00000102131	TRANSLATION	protein_coding	-	CCDS51274.1	1	201	0	0	2.7	355.5	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028617	Lrrc42	ENSMUST00000156771	ENSMUSP00000116709	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028617	Lrrc42	ENSMUST00000144176	ENSMUSP00000120501	TRANSLATION	protein_coding	start/stop	-	3	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028617	Lrrc42	ENSMUST00000137837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028617	Lrrc42	ENSMUST00000142657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028617	Lrrc42	ENSMUST00000030360	ENSMUSP00000030360	TRANSLATION	protein_coding	-	CCDS18434.1	1	421	0	0	1.5	35.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048001	Hes5	ENSMUST00000151480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048001	Hes5	ENSMUST00000049621	ENSMUSP00000051118	TRANSLATION	protein_coding	-	CCDS19018.1	1	167	0	0.6	2.7	89.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028737	Aldh4a1	ENSMUST00000039818	ENSMUSP00000043821	TRANSLATION	protein_coding	-	CCDS18848.1	1	562	39	12.8	7.6	343.2	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000028737	Aldh4a1	ENSMUST00000146309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028737	Aldh4a1	ENSMUST00000124987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028657	Ppt1	ENSMUST00000121870	ENSMUSP00000113367	TRANSLATION	protein_coding	-	-	2	179	5	4.75	0	363.4	0	2,-2	-	-	4.284	MINOR
ENSMUSG00000028657	Ppt1	ENSMUST00000120157	ENSMUSP00000113258	TRANSLATION	nonsense_mediated_decay	-	-	2	54	0	1	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028657	Ppt1	ENSMUST00000097902	ENSMUSP00000095512	TRANSLATION	protein_coding	-	-	1	197	5	4.85	0	367.2	0	2,-2	-	-	4.284	MINOR
ENSMUSG00000028657	Ppt1	ENSMUST00000030412	ENSMUSP00000030412	TRANSLATION	protein_coding	-	CCDS38870.1	1	306	7	8.5	3.9	679.1	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000007613	Tgfbr1	ENSMUST00000123962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007613	Tgfbr1	ENSMUST00000007757	ENSMUSP00000007757	TRANSLATION	protein_coding	-	CCDS18160.1	1	503	20	9	3.9	226.8	2	4,-1	-	-	18.935	PRINCIPAL:3
ENSMUSG00000007613	Tgfbr1	ENSMUST00000126171	ENSMUSP00000123761	TRANSLATION	protein_coding	-	-	5	434	20	8	4.1	186.1	2	-4,-6	-	-	14.56	MINOR
ENSMUSG00000007613	Tgfbr1	ENSMUST00000044234	ENSMUSP00000048501	TRANSLATION	protein_coding	-	CCDS84728.1	1	499	20	9	2.7	226.8	2	4,-1	-	-	18.548	ALTERNATIVE:2
ENSMUSG00000007613	Tgfbr1	ENSMUST00000107725	ENSMUSP00000103353	TRANSLATION	protein_coding	-	CCDS84729.1	1	420	20	7	0.5	186.1	2	-4,-5	-	-	11.556	MINOR
ENSMUSG00000028334	Nans	ENSMUST00000132345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028334	Nans	ENSMUST00000030018	ENSMUSP00000030018	TRANSLATION	protein_coding	-	CCDS18152.1	1	359	4	4.22	17.3	287.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000028334	Nans	ENSMUST00000150584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028334	Nans	ENSMUST00000137874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052135	Foxo6	ENSMUST00000102656	ENSMUSP00000099716	TRANSLATION	protein_coding	-	CCDS18588.1	1	559	0	1.2	3.9	199.9	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000070902	Zfp352	ENSMUST00000080541	ENSMUSP00000079383	TRANSLATION	protein_coding	-	CCDS18353.2	-	551	12	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070902	Zfp352	ENSMUST00000107129	ENSMUSP00000102746	TRANSLATION	protein_coding	-	CCDS18353.2	1	551	12	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040795	Iqcc	ENSMUST00000127029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040795	Iqcc	ENSMUST00000046675	ENSMUSP00000040584	TRANSLATION	protein_coding	-	CCDS38886.1	2	418	0	0	0.5	21.2	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000040795	Iqcc	ENSMUST00000146378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040795	Iqcc	ENSMUST00000131559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040795	Iqcc	ENSMUST00000121442	ENSMUSP00000113036	TRANSLATION	protein_coding	-	-	2	91	0	0	0	21.2	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000028785	Hpca	ENSMUST00000164649	ENSMUSP00000129548	TRANSLATION	protein_coding	-	CCDS18682.1	2	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028785	Hpca	ENSMUST00000135763	ENSMUSP00000120655	TRANSLATION	protein_coding	stop	-	3	45	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028785	Hpca	ENSMUST00000116442	ENSMUSP00000112143	TRANSLATION	protein_coding	-	CCDS18682.1	3	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028785	Hpca	ENSMUST00000030572	ENSMUSP00000030572	TRANSLATION	protein_coding	-	CCDS18682.1	1	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028785	Hpca	ENSMUST00000125931	ENSMUSP00000115031	TRANSLATION	protein_coding	stop	-	3	187	22	3.75	0	92.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028785	Hpca	ENSMUST00000149763	ENSMUSP00000115619	TRANSLATION	protein_coding	stop	-	5	161	17	3	0	74.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028785	Hpca	ENSMUST00000095807	ENSMUSP00000093486	TRANSLATION	protein_coding	-	CCDS18682.1	1	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028785	Hpca	ENSMUST00000139450	ENSMUSP00000119178	TRANSLATION	protein_coding	-	CCDS18682.1	3	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028785	Hpca	ENSMUST00000116444	ENSMUSP00000112145	TRANSLATION	protein_coding	-	CCDS18682.1	5	193	22	4.08	19.5	92.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042477	Tfap2e	ENSMUST00000048194	ENSMUSP00000035902	TRANSLATION	protein_coding	-	CCDS18658.1	1	442	0	0	2.7	289.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000028760	Eif4g3	ENSMUST00000105831	ENSMUSP00000101457	TRANSLATION	protein_coding	-	-	5	1567	0	14.36	0.5	396.1	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000028760	Eif4g3	ENSMUST00000203828	ENSMUSP00000145147	TRANSLATION	protein_coding	-	-	5	1762	0	14.36	0	396.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000028760	Eif4g3	ENSMUST00000140796	ENSMUSP00000115946	TRANSLATION	protein_coding	start	-	5	1002	0	14.36	0	396.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028760	Eif4g3	ENSMUST00000139759	ENSMUSP00000116927	TRANSLATION	protein_coding	stop	-	5	183	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000028760	Eif4g3	ENSMUST00000127707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028760	Eif4g3	ENSMUST00000132194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028760	Eif4g3	ENSMUST00000084215	ENSMUSP00000081233	TRANSLATION	protein_coding	-	-	5	1579	0	14.36	0.5	396.1	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000028760	Eif4g3	ENSMUST00000133902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028760	Eif4g3	ENSMUST00000148074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028760	Eif4g3	ENSMUST00000058133	ENSMUSP00000059465	TRANSLATION	protein_coding	-	-	1	235	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000028760	Eif4g3	ENSMUST00000140317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028760	Eif4g3	ENSMUST00000084214	ENSMUSP00000081232	TRANSLATION	protein_coding	-	CCDS38926.1	1	1578	0	14.36	0.5	396.1	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000028760	Eif4g3	ENSMUST00000155142	ENSMUSP00000122972	TRANSLATION	protein_coding	stop	-	2	146	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028760	Eif4g3	ENSMUST00000135745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028760	Eif4g3	ENSMUST00000105830	ENSMUSP00000101456	TRANSLATION	protein_coding	-	-	1	509	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000070979	Actl7a	ENSMUST00000095079	ENSMUSP00000092692	TRANSLATION	protein_coding	-	CCDS18197.1	-	440	22	0.8	2.7	458.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033379	Atp6v0b	ENSMUST00000147845	ENSMUSP00000137945	TRANSLATION	protein_coding	stop	-	2	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033379	Atp6v0b	ENSMUST00000150204	ENSMUSP00000119988	TRANSLATION	protein_coding	-	-	5	158	0	4.148	3.6	109.7	10	2,-2	-	-	11.805	MINOR
ENSMUSG00000033379	Atp6v0b	ENSMUST00000152356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033379	Atp6v0b	ENSMUST00000149868	ENSMUSP00000137788	TRANSLATION	protein_coding	stop	-	3	107	0	2.95	0	54.5	7	2,-2	-	-	-1	MINOR
ENSMUSG00000033379	Atp6v0b	ENSMUST00000136596	ENSMUSP00000118538	TRANSLATION	protein_coding	stop	-	3	18	0	0.5	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000033379	Atp6v0b	ENSMUST00000133530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033379	Atp6v0b	ENSMUST00000036380	ENSMUSP00000047682	TRANSLATION	protein_coding	-	CCDS18540.1	1	205	0	4.628	11.2	109.7	11	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033379	Atp6v0b	ENSMUST00000124974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033379	Atp6v0b	ENSMUST00000132073	ENSMUSP00000137654	TRANSLATION	protein_coding	stop	-	5	84	0	2	0	54.5	6	2,-2	-	-	-1	MINOR
ENSMUSG00000029059	Prxl2b	ENSMUST00000030935	ENSMUSP00000030935	TRANSLATION	protein_coding	-	CCDS19016.1	1	201	0	0	8.5	76.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029059	Prxl2b	ENSMUST00000123513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029059	Prxl2b	ENSMUST00000132281	ENSMUSP00000116611	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	74.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040533	Matn1	ENSMUST00000102576	ENSMUSP00000099636	TRANSLATION	protein_coding	-	CCDS18713.1	1	500	10	4.53	1.7	460.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000028455	Stoml2	ENSMUST00000126026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000125180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000123465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000127645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000142781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000030169	ENSMUSP00000030169	TRANSLATION	protein_coding	-	CCDS18089.1	1	353	0	3.52	5.1	190	0	-2,2	-	-	14	PRINCIPAL:1
ENSMUSG00000028455	Stoml2	ENSMUST00000136326	ENSMUSP00000117586	TRANSLATION	protein_coding	stop	-	5	286	0	3.52	0	166	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028455	Stoml2	ENSMUST00000138030	ENSMUSP00000118465	TRANSLATION	protein_coding	start/stop	-	3	212	0	2.9	0	106.1	0	1,3	-	-	-1	MINOR
ENSMUSG00000028455	Stoml2	ENSMUST00000143371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028455	Stoml2	ENSMUST00000135660	ENSMUSP00000123478	TRANSLATION	protein_coding	start/stop	-	2	287	0	3.52	0	171.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028455	Stoml2	ENSMUST00000153203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042388	Dlgap3	ENSMUST00000046659	ENSMUSP00000039724	TRANSLATION	protein_coding	-	CCDS18665.1	1	977	0	2.29	2.7	500.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042388	Dlgap3	ENSMUST00000106092	ENSMUSP00000101698	TRANSLATION	protein_coding	-	-	5	966	0	1.96	1.5	466.8	0	-4,-2	-	-	9.114	MINOR
ENSMUSG00000042388	Dlgap3	ENSMUST00000137062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042388	Dlgap3	ENSMUST00000106094	ENSMUSP00000101700	TRANSLATION	protein_coding	-	CCDS18665.1	1	977	0	2.29	2.7	500.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000028788	Ptp4a2	ENSMUST00000132411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028788	Ptp4a2	ENSMUST00000127558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028788	Ptp4a2	ENSMUST00000132386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028788	Ptp4a2	ENSMUST00000165853	ENSMUSP00000125901	TRANSLATION	protein_coding	-	CCDS18704.1	5	167	10	4.75	21.5	31.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028788	Ptp4a2	ENSMUST00000133662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028788	Ptp4a2	ENSMUST00000030578	ENSMUSP00000030578	TRANSLATION	protein_coding	-	CCDS18704.1	5	167	10	4.75	21.5	31.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028788	Ptp4a2	ENSMUST00000141754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028427	Aqp7	ENSMUST00000030136	ENSMUSP00000030136	TRANSLATION	protein_coding	-	CCDS18055.1	1	303	0	4.42	0.5	164.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028427	Aqp7	ENSMUST00000144201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028427	Aqp7	ENSMUST00000149517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028427	Aqp7	ENSMUST00000054945	ENSMUSP00000093007	TRANSLATION	protein_coding	-	CCDS18055.1	1	303	0	4.42	0.5	164.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028329	Xpa	ENSMUST00000142380	ENSMUSP00000121850	TRANSLATION	protein_coding	stop	-	1	273	4	3.25	0	153.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028329	Xpa	ENSMUST00000132358	ENSMUSP00000138512	TRANSLATION	nonsense_mediated_decay	start	-	5	134	2	2.75	0	134.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028329	Xpa	ENSMUST00000058232	ENSMUSP00000050453	TRANSLATION	protein_coding	-	-	1	279	4	3.25	0	153.9	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000028329	Xpa	ENSMUST00000030013	ENSMUSP00000030013	TRANSLATION	protein_coding	-	CCDS18146.1	1	272	4	3.25	1.5	153.9	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000028329	Xpa	ENSMUST00000130051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028329	Xpa	ENSMUST00000141318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070661	Rnf186	ENSMUST00000239443	ENSMUSP00000159341	TRANSLATION	protein_coding	-	CCDS51338.1	-	280	8	0	1.5	28.7	2	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000070661	Rnf186	ENSMUST00000116094	ENSMUSP00000111780	TRANSLATION	protein_coding	-	-	-	226	8	0	0	28.7	2	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000163946	ENSMUSP00000130892	TRANSLATION	protein_coding	-	CCDS51298.1	2	47	0	0	4.1	87.8	0	-4,-2	-	-	1.17	MINOR
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000184704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000185036	ENSMUSP00000139121	TRANSLATION	protein_coding	-	-	2	158	0	0	0	203.7	0	-4,-6	-	-	5.748	MINOR
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000137769	ENSMUSP00000138806	TRANSLATION	protein_coding	-	CCDS51298.1	1	47	0	0	4.1	87.8	0	-4,-2	-	-	1.17	MINOR
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000125776	ENSMUSP00000138901	TRANSLATION	protein_coding	start	-	2	126	0	0	0	204.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078570	1110065P20Rik	ENSMUST00000106190	ENSMUSP00000101796	TRANSLATION	protein_coding	-	CCDS84792.1	2	110	0	0	6.3	207.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036114	Rpp25l	ENSMUST00000038434	ENSMUSP00000041477	TRANSLATION	protein_coding	-	CCDS18068.1	1	163	0	0	3.9	59.6	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000028341	Nr4a3	ENSMUST00000030025	ENSMUSP00000030025	TRANSLATION	protein_coding	-	CCDS18163.1	1	627	8	4.4	1.5	185	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028341	Nr4a3	ENSMUST00000133539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028341	Nr4a3	ENSMUST00000153369	ENSMUSP00000121455	TRANSLATION	protein_coding	start	-	5	657	8	4.4	0	185	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028341	Nr4a3	ENSMUST00000154186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049972	Skint9	ENSMUST00000058605	ENSMUSP00000052670	TRANSLATION	protein_coding	-	CCDS38839.1	1	319	0	0.6	0.5	0	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000028779	Pef1	ENSMUST00000118199	ENSMUSP00000112638	TRANSLATION	protein_coding	-	CCDS18706.1	5	275	15	2.6	0.5	50.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028779	Pef1	ENSMUST00000030563	ENSMUSP00000030563	TRANSLATION	protein_coding	-	CCDS18706.1	1	275	15	2.6	0.5	50.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078505	Aadacl4fm4	ENSMUST00000105747	ENSMUSP00000101373	TRANSLATION	protein_coding	-	CCDS38957.1	5	407	3	1.42	0.5	0	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000028990	Lzic	ENSMUST00000146427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028990	Lzic	ENSMUST00000138464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028990	Lzic	ENSMUST00000030842	ENSMUSP00000030842	TRANSLATION	protein_coding	-	CCDS18961.1	1	190	0	1.8	21.5	111.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028990	Lzic	ENSMUST00000141293	ENSMUSP00000119294	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028990	Lzic	ENSMUST00000124413	ENSMUSP00000116150	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034035	Ccdc17	ENSMUST00000148260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034035	Ccdc17	ENSMUST00000151441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034035	Ccdc17	ENSMUST00000051869	ENSMUSP00000059848	TRANSLATION	protein_coding	-	CCDS18512.1	1	565	3	0	0.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000034035	Ccdc17	ENSMUST00000146777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034035	Ccdc17	ENSMUST00000121907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039634	Zfp189	ENSMUST00000107696	ENSMUSP00000103324	TRANSLATION	protein_coding	-	CCDS18175.1	1	608	64	0.4	6.3	391.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000039634	Zfp189	ENSMUST00000042964	ENSMUSP00000036663	TRANSLATION	protein_coding	-	CCDS18175.1	2	608	64	0.4	6.3	391.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000046435	Gm13078	ENSMUST00000078695	ENSMUSP00000077761	TRANSLATION	protein_coding	-	CCDS51357.1	5	474	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000023232	Serinc2	ENSMUST00000120126	ENSMUSP00000113044	TRANSLATION	protein_coding	-	-	5	459	0	0	0.5	515.1	19	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000023232	Serinc2	ENSMUST00000154846	ENSMUSP00000116586	TRANSLATION	protein_coding	stop	-	5	82	0	0	0	84.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000023232	Serinc2	ENSMUST00000105996	ENSMUSP00000101618	TRANSLATION	protein_coding	-	CCDS51310.1	1	450	0	0	2.7	515.1	19	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000023232	Serinc2	ENSMUST00000122374	ENSMUSP00000112535	TRANSLATION	protein_coding	-	CCDS57301.1	1	395	0	0	0.5	469	17	-4,-7	-	-	3.234	MINOR
ENSMUSG00000023232	Serinc2	ENSMUST00000146478	ENSMUSP00000115198	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	184.4	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000038816	Ctnnal1	ENSMUST00000045142	ENSMUSP00000036487	TRANSLATION	protein_coding	-	CCDS18200.1	1	731	0	8.42	1.5	195.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038816	Ctnnal1	ENSMUST00000154511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000136308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000134915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000131231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000134754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000132764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000127908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038816	Ctnnal1	ENSMUST00000107612	ENSMUSP00000103237	TRANSLATION	protein_coding	-	-	3	219	0	2.638	0	90.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000096750	Gm11757	ENSMUST00000107321	ENSMUSP00000102942	TRANSLATION	protein_coding	-	CCDS51208.1	1	360	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000096750	Gm11757	ENSMUST00000107320	ENSMUSP00000102941	TRANSLATION	protein_coding	-	-	5	232	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000060268	Armh1	ENSMUST00000077500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060268	Armh1	ENSMUST00000130660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060268	Armh1	ENSMUST00000165128	ENSMUSP00000128613	TRANSLATION	protein_coding	-	CCDS51280.1	5	441	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000039611	Tmem246	ENSMUST00000151542	ENSMUSP00000117861	TRANSLATION	protein_coding	stop	-	5	38	0	0	0	0	1	-3,-1	-	-	-1	MINOR
ENSMUSG00000039611	Tmem246	ENSMUST00000042750	ENSMUSP00000040885	TRANSLATION	protein_coding	-	CCDS18177.1	1	403	0	0	7.5	0	5	-3,-1	-	-	3	PRINCIPAL:1
ENSMUSG00000039611	Tmem246	ENSMUST00000150664	ENSMUSP00000115100	TRANSLATION	protein_coding	stop	-	2	133	0	0	0	0	3	-3,-1	-	-	-1	MINOR
ENSMUSG00000078502	Gm13212	ENSMUST00000097794	ENSMUSP00000095402	TRANSLATION	protein_coding	stop	-	5	407	24	2.6	0	213.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078502	Gm13212	ENSMUST00000105739	ENSMUSP00000101365	TRANSLATION	protein_coding	-	CCDS84823.1	5	799	80	5.4	0.5	533.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078502	Gm13212	ENSMUST00000119718	ENSMUSP00000112918	TRANSLATION	protein_coding	-	-	5	420	8	1.6	0	114.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000028642	Tmem269	ENSMUST00000212054	ENSMUSP00000148286	TRANSLATION	protein_coding	-	CCDS18574.1	1	254	0	0	1.5	0	5	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000028642	Tmem269	ENSMUST00000030394	ENSMUSP00000030394	TRANSLATION	protein_coding	-	-	1	202	0	0	0	0	4	1,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000096674	Mup15	ENSMUST00000095049	ENSMUSP00000092659	TRANSLATION	protein_coding	-	CCDS51196.1	2	180	0	5.08	0.5	109.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073830	Mup14	ENSMUST00000071005	ENSMUSP00000064072	TRANSLATION	protein_coding	-	CCDS51195.1	2	180	0	4.83	0.5	110.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073830	Mup14	ENSMUST00000075206	ENSMUSP00000074696	TRANSLATION	protein_coding	-	CCDS51195.1	1	180	0	4.83	0.5	110.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073830	Mup14	ENSMUST00000136039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073830	Mup14	ENSMUST00000125461	ENSMUSP00000115821	TRANSLATION	protein_coding	start	-	5	150	0	4.08	0	105.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073755	5730409E04Rik	ENSMUST00000164362	ENSMUSP00000128538	TRANSLATION	protein_coding	-	CCDS18656.1	3	230	0	0	6.3	402.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000073755	5730409E04Rik	ENSMUST00000097886	ENSMUSP00000095496	TRANSLATION	protein_coding	-	CCDS18656.1	1	230	0	0	6.3	402.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000115466	Vmn1r3	ENSMUST00000105159	ENSMUSP00000100790	TRANSLATION	protein_coding	-	CCDS51108.1	-	306	0	0	1.5	117.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028558	Calr4	ENSMUST00000106629	ENSMUSP00000102240	TRANSLATION	protein_coding	-	CCDS71441.1	1	313	1	5.5	0.5	192.2	0	-4,-5	-	-	4.474	MINOR
ENSMUSG00000028558	Calr4	ENSMUST00000106628	ENSMUSP00000102239	TRANSLATION	protein_coding	-	CCDS71441.1	1	313	1	5.5	0.5	192.2	0	-4,-5	-	-	4.474	MINOR
ENSMUSG00000028558	Calr4	ENSMUST00000141555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028558	Calr4	ENSMUST00000106631	ENSMUSP00000102242	TRANSLATION	protein_coding	-	CCDS71441.1	1	313	1	5.5	0.5	192.2	0	-4,-5	-	-	4.474	MINOR
ENSMUSG00000028558	Calr4	ENSMUST00000030285	ENSMUSP00000030285	TRANSLATION	protein_coding	-	CCDS18461.1	1	420	4	7.5	0.5	267.6	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000028854	Slc9a1	ENSMUST00000141658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028854	Slc9a1	ENSMUST00000132864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028854	Slc9a1	ENSMUST00000140681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028854	Slc9a1	ENSMUST00000030669	ENSMUSP00000030669	TRANSLATION	protein_coding	-	CCDS38903.1	1	820	0	5.75	1.5	398.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000028854	Slc9a1	ENSMUST00000156079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085933	Tmem61	ENSMUST00000239070	ENSMUSP00000159161	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	0	0	163.4	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000085933	Tmem61	ENSMUST00000238833	ENSMUSP00000158903	TRANSLATION	protein_coding	-	-	-	197	0	0	0.5	254.2	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000085933	Tmem61	ENSMUST00000148907	ENSMUSP00000159005	TRANSLATION	nonsense_mediated_decay	-	-	2	135	0	0	0	166.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000085933	Tmem61	ENSMUST00000239042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085933	Tmem61	ENSMUST00000239147	ENSMUSP00000159035	TRANSLATION	protein_coding	-	-	-	209	0	0	0	147.9	5	0,-3	-	-	0	MINOR
ENSMUSG00000085933	Tmem61	ENSMUST00000177702	ENSMUSP00000159103	TRANSLATION	protein_coding	start/stop	-	5	187	0	0	0	249.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000085933	Tmem61	ENSMUST00000239122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025330	Padi4	ENSMUST00000026381	ENSMUSP00000026381	TRANSLATION	protein_coding	-	CCDS18854.1	1	666	22	14.95	1.5	899.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025330	Padi4	ENSMUST00000143019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025330	Padi4	ENSMUST00000137440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025330	Padi4	ENSMUST00000137516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028454	Pigo	ENSMUST00000131506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028454	Pigo	ENSMUST00000067481	ENSMUSP00000069749	TRANSLATION	protein_coding	-	CCDS84720.1	5	1069	4	1.02	0.5	57.7	21	1,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000028454	Pigo	ENSMUST00000149333	ENSMUSP00000114917	TRANSLATION	protein_coding	start	-	5	679	4	1.02	0	57.7	8	-1,-5	-	-	-1	MINOR
ENSMUSG00000028454	Pigo	ENSMUST00000155429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028454	Pigo	ENSMUST00000098109	ENSMUSP00000095713	TRANSLATION	protein_coding	-	CCDS18088.1	1	1101	4	1.02	0.5	57.7	21	-1,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000059343	Aldoart1	ENSMUST00000179234	ENSMUSP00000136908	TRANSLATION	protein_coding	-	-	-	364	20	1	15.5	616.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059343	Aldoart1	ENSMUST00000078617	ENSMUSP00000077687	TRANSLATION	protein_coding	-	CCDS57279.1	-	419	20	1	1.5	616.9	0	-4,-2	-	-	18.136	MINOR
ENSMUSG00000028243	Ubxn2b	ENSMUST00000029907	ENSMUSP00000029907	TRANSLATION	protein_coding	-	CCDS17949.1	1	331	0	4	0.5	160.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000028861	Mrps15	ENSMUST00000030675	ENSMUSP00000030675	TRANSLATION	protein_coding	-	CCDS18641.1	1	258	0	5.7	1.5	80.2	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000028861	Mrps15	ENSMUST00000138739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028861	Mrps15	ENSMUST00000124614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000132802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000153746	ENSMUSP00000114610	TRANSLATION	protein_coding	-	-	1	176	0	0	0	185	0	-4,-7	-	-	6	MINOR
ENSMUSG00000034401	Spata6	ENSMUST00000137072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000070513	ENSMUSP00000069435	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	99	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034401	Spata6	ENSMUST00000143879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000038868	ENSMUSP00000036964	TRANSLATION	protein_coding	-	CCDS38836.1	1	488	0	0	7.5	185	0	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000034401	Spata6	ENSMUST00000125999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000123718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000156179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000149834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000122820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000140366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000134000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034401	Spata6	ENSMUST00000084354	ENSMUSP00000081383	TRANSLATION	protein_coding	-	-	5	472	0	0	6	185	0	-4,-7	-	-	8.307	ALTERNATIVE:1
ENSMUSG00000061894	Zscan20	ENSMUST00000084276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061894	Zscan20	ENSMUST00000147876	ENSMUSP00000121315	TRANSLATION	protein_coding	stop	-	2	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061894	Zscan20	ENSMUST00000141040	ENSMUSP00000123585	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061894	Zscan20	ENSMUST00000097877	ENSMUSP00000095487	TRANSLATION	protein_coding	-	CCDS18672.2	1	1030	35	1.93	0.5	454.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061894	Zscan20	ENSMUST00000151226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061894	Zscan20	ENSMUST00000135309	ENSMUSP00000119338	TRANSLATION	nonsense_mediated_decay	-	-	1	300	0	1.33	0	133.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028715	Cyp4a14	ENSMUST00000124412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028715	Cyp4a14	ENSMUST00000030487	ENSMUSP00000030487	TRANSLATION	protein_coding	-	CCDS18491.1	1	507	30	9.61	1.5	426.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000066000	Zfp979	ENSMUST00000105720	ENSMUSP00000101345	TRANSLATION	protein_coding	-	CCDS59663.1	2	407	18	1.8	0.5	133.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000066000	Zfp979	ENSMUST00000127826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066000	Zfp979	ENSMUST00000037565	ENSMUSP00000038153	TRANSLATION	protein_coding	-	CCDS59663.1	2	407	18	1.8	0.5	133.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000066000	Zfp979	ENSMUST00000133006	ENSMUSP00000114677	TRANSLATION	protein_coding	stop	-	2	113	0	1	0	71.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028517	Plpp3	ENSMUST00000064139	ENSMUSP00000065719	TRANSLATION	protein_coding	-	CCDS18417.1	1	312	7	0	11.5	99.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042500	Ago4	ENSMUST00000084289	ENSMUSP00000081312	TRANSLATION	protein_coding	-	CCDS18654.1	1	861	19	16.25	12.3	797.3	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000042500	Ago4	ENSMUST00000122951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028348	Cavin4	ENSMUST00000030033	ENSMUSP00000030033	TRANSLATION	protein_coding	-	CCDS18169.2	1	362	0	0.8	1.5	296.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028222	Calb1	ENSMUST00000141336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028222	Calb1	ENSMUST00000136266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028222	Calb1	ENSMUST00000029876	ENSMUSP00000029876	TRANSLATION	protein_coding	-	CCDS17984.1	1	261	18	7.5	17.5	69.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000006389	Mpl	ENSMUST00000102671	ENSMUSP00000099732	TRANSLATION	protein_coding	-	CCDS18552.1	1	625	0	2.38	0.5	100.5	1	2,-2	-	-	11.76	PRINCIPAL:3
ENSMUSG00000006389	Mpl	ENSMUST00000106375	ENSMUSP00000101983	TRANSLATION	protein_coding	-	-	1	566	0	2.059	0	100.5	1	-2,-4	-	-	10.986	ALTERNATIVE:2
ENSMUSG00000006389	Mpl	ENSMUST00000006556	ENSMUSP00000006556	TRANSLATION	protein_coding	-	CCDS51284.1	1	633	0	2.479	0.5	100.5	1	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000006389	Mpl	ENSMUST00000168404	ENSMUSP00000130167	TRANSLATION	protein_coding	start	-	1	465	0	2.479	0.5	100.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000006389	Mpl	ENSMUST00000216417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115072	Vmn1r2	ENSMUST00000105160	ENSMUSP00000100791	TRANSLATION	protein_coding	-	CCDS51107.1	-	306	0	0	1.5	108.4	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115072	Vmn1r2	ENSMUST00000226198	ENSMUSP00000154142	TRANSLATION	protein_coding	-	CCDS51107.1	-	306	0	0	1.5	108.4	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000028634	Hivep3	ENSMUST00000141605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000123698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000227491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000106307	ENSMUSP00000101914	TRANSLATION	protein_coding	-	CCDS38863.1	1	2348	16	1.75	0.5	79.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028634	Hivep3	ENSMUST00000125069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000144907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000084306	ENSMUSP00000081330	TRANSLATION	protein_coding	start	-	-	116	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028634	Hivep3	ENSMUST00000166542	ENSMUSP00000130249	TRANSLATION	protein_coding	-	CCDS38863.1	1	2348	16	1.75	0.5	79.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028634	Hivep3	ENSMUST00000143837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028634	Hivep3	ENSMUST00000136547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073842	Mup7	ENSMUST00000166098	ENSMUSP00000130795	TRANSLATION	protein_coding	-	-	5	235	0	5.05	0.5	107.6	0	4,-1	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000073842	Mup7	ENSMUST00000125282	ENSMUSP00000115582	TRANSLATION	protein_coding	stop	-	2	171	0	4.75	0	102.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000073842	Mup7	ENSMUST00000079697	ENSMUSP00000078636	TRANSLATION	protein_coding	-	CCDS84739.1	1	180	0	5.08	0.5	107.6	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000028224	Nbn	ENSMUST00000029879	ENSMUSP00000029879	TRANSLATION	protein_coding	-	CCDS17986.1	1	751	0	5.12	1.5	272.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000028224	Nbn	ENSMUST00000149069	ENSMUSP00000120829	TRANSLATION	protein_coding	stop	-	1	548	0	5.12	0	161	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028298	Cga	ENSMUST00000135871	ENSMUSP00000119152	TRANSLATION	protein_coding	stop	-	5	117	0	1.75	12.6	169.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028298	Cga	ENSMUST00000029975	ENSMUSP00000029975	TRANSLATION	protein_coding	-	CCDS18035.1	1	120	0	1.75	12.6	177	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000028298	Cga	ENSMUST00000108130	ENSMUSP00000103765	TRANSLATION	protein_coding	-	CCDS18035.1	5	120	0	1.75	12.6	177	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000042608	Stk40	ENSMUST00000134369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042608	Stk40	ENSMUST00000139188	ENSMUSP00000114793	TRANSLATION	protein_coding	stop	-	3	164	0	3.63	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042608	Stk40	ENSMUST00000116286	ENSMUSP00000111990	TRANSLATION	protein_coding	-	CCDS51299.1	1	449	0	8.33	0.5	124.1	1	-4,-2	-	-	12	MINOR
ENSMUSG00000042608	Stk40	ENSMUST00000139524	ENSMUSP00000121674	TRANSLATION	protein_coding	stop	-	5	61	0	1.13	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042608	Stk40	ENSMUST00000094761	ENSMUSP00000092354	TRANSLATION	protein_coding	-	CCDS51300.1	1	435	0	8.33	8.8	124.1	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000042608	Stk40	ENSMUST00000127092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078520	Cela3a	ENSMUST00000024200	ENSMUSP00000024200	TRANSLATION	protein_coding	-	CCDS51332.1	5	283	6	5.45	0.5	206.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000100713	Ifna7	ENSMUST00000105143	ENSMUSP00000100774	TRANSLATION	protein_coding	-	CCDS18342.1	-	190	0	1	3.9	208.9	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000023120	Ldc1	ENSMUST00000023884	ENSMUSP00000023884	TRANSLATION	protein_coding	-	CCDS38890.1	1	425	14	7.33	0.5	317.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023120	Ldc1	ENSMUST00000124528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037157	Il22ra1	ENSMUST00000102546	ENSMUSP00000099605	TRANSLATION	protein_coding	-	CCDS18789.1	1	581	3	4	0.5	115.7	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000003644	Rps6ka1	ENSMUST00000157067	ENSMUSP00000121341	TRANSLATION	protein_coding	-	-	1	736	40	18.01	0	527.7	0	-4,-1	-	-	17.4	MINOR
ENSMUSG00000003644	Rps6ka1	ENSMUST00000137486	ENSMUSP00000119328	TRANSLATION	protein_coding	stop	-	5	741	40	18.01	6.3	527.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003644	Rps6ka1	ENSMUST00000174481	ENSMUSP00000134507	TRANSLATION	protein_coding	-	-	5	625	32	15.93	1.2	495.2	0	-4,-5	-	-	6.015	MINOR
ENSMUSG00000003644	Rps6ka1	ENSMUST00000168974	ENSMUSP00000126774	TRANSLATION	protein_coding	-	CCDS71487.1	1	719	40	18.16	6.3	527.7	0	-4,-5	-	-	19.185	MINOR
ENSMUSG00000003644	Rps6ka1	ENSMUST00000003741	ENSMUSP00000003741	TRANSLATION	protein_coding	-	CCDS71488.1	1	724	40	17.98	0.5	493.2	0	-4,-5	-	-	15.27	MINOR
ENSMUSG00000003644	Rps6ka1	ENSMUST00000173961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003644	Rps6ka1	ENSMUST00000105894	ENSMUSP00000101514	TRANSLATION	protein_coding	-	CCDS18758.2	1	735	40	18.31	11.7	527.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003644	Rps6ka1	ENSMUST00000173989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003644	Rps6ka1	ENSMUST00000129636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028435	Aqp3	ENSMUST00000055327	ENSMUSP00000055110	TRANSLATION	protein_coding	-	CCDS38714.1	1	292	0	4.44	11	176	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000028435	Aqp3	ENSMUST00000154722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058503	Fam133b	ENSMUST00000196059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058503	Fam133b	ENSMUST00000198598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058503	Fam133b	ENSMUST00000195924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058503	Fam133b	ENSMUST00000196499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058503	Fam133b	ENSMUST00000115527	ENSMUSP00000111189	TRANSLATION	protein_coding	-	CCDS39000.1	1	245	0	0	1.7	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000058503	Fam133b	ENSMUST00000199666	ENSMUSP00000143004	TRANSLATION	nonsense_mediated_decay	-	-	1	109	0	0	2	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058503	Fam133b	ENSMUST00000197082	ENSMUSP00000142744	TRANSLATION	protein_coding	-	-	5	228	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000058503	Fam133b	ENSMUST00000200354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049537	Tecrl	ENSMUST00000053543	ENSMUSP00000062122	TRANSLATION	protein_coding	-	CCDS19375.1	1	361	0	1.966	6.4	69.4	4	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000049537	Tecrl	ENSMUST00000146669	ENSMUSP00000115144	TRANSLATION	protein_coding	start/stop	-	3	214	0	1.366	0	0	3	-4,-1	-	-	-1	MINOR
ENSMUSG00000091049	Gm1979	ENSMUST00000168875	ENSMUSP00000130718	TRANSLATION	protein_coding	-	CCDS59671.1	5	267	0	0	0.5	83	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091049	Gm1979	ENSMUST00000170224	ENSMUSP00000130782	TRANSLATION	protein_coding	start	-	5	221	0	0	0.5	83	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054630	Ugt2b5	ENSMUST00000067790	ENSMUSP00000068282	TRANSLATION	protein_coding	-	CCDS19385.3	1	530	15	3.8	1.5	854.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029235	Pdcl2	ENSMUST00000031145	ENSMUSP00000031145	TRANSLATION	protein_coding	-	CCDS39116.1	1	240	0	3.25	2.7	62.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029235	Pdcl2	ENSMUST00000122213	ENSMUSP00000113699	TRANSLATION	protein_coding	-	CCDS80304.1	1	192	0	3.25	0.5	60.4	0	-4,-5	-	-	11.796	ALTERNATIVE:2
ENSMUSG00000023707	Ogfod2	ENSMUST00000131094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023707	Ogfod2	ENSMUST00000148365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023707	Ogfod2	ENSMUST00000199457	ENSMUSP00000142745	TRANSLATION	protein_coding	start/stop	-	2	152	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000023707	Ogfod2	ENSMUST00000198505	ENSMUSP00000142965	TRANSLATION	protein_coding	start	-	3	187	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000023707	Ogfod2	ENSMUST00000130140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023707	Ogfod2	ENSMUST00000119269	ENSMUSP00000112701	TRANSLATION	protein_coding	-	CCDS84961.1	1	236	0	0	0.5	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000023707	Ogfod2	ENSMUST00000198770	ENSMUSP00000143318	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023707	Ogfod2	ENSMUST00000136955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023707	Ogfod2	ENSMUST00000024470	ENSMUSP00000024470	TRANSLATION	protein_coding	-	CCDS19672.1	1	349	3	0	7.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000023707	Ogfod2	ENSMUST00000196627	ENSMUSP00000143698	TRANSLATION	protein_coding	-	-	3	137	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000072889	Nfxl1	ENSMUST00000134452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072889	Nfxl1	ENSMUST00000198977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072889	Nfxl1	ENSMUST00000074948	ENSMUSP00000074481	TRANSLATION	protein_coding	stop	-	1	346	8	0	0	44.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000072889	Nfxl1	ENSMUST00000135318	ENSMUSP00000114355	TRANSLATION	nonsense_mediated_decay	-	-	1	500	8	0	0	94.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000072889	Nfxl1	ENSMUST00000153882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072889	Nfxl1	ENSMUST00000087216	ENSMUSP00000084467	TRANSLATION	protein_coding	-	CCDS39109.1	5	918	8	0	1.5	147.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000072889	Nfxl1	ENSMUST00000149393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072889	Nfxl1	ENSMUST00000146761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072889	Nfxl1	ENSMUST00000149340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037979	Ccdc92	ENSMUST00000143268	ENSMUSP00000114983	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	79.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037979	Ccdc92	ENSMUST00000036206	ENSMUSP00000038075	TRANSLATION	protein_coding	-	CCDS19681.1	1	314	0	0	9.5	79.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000037979	Ccdc92	ENSMUST00000135495	ENSMUSP00000119438	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0	0	78.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001166	Oas1c	ENSMUST00000125547	ENSMUSP00000118441	TRANSLATION	protein_coding	stop	-	5	39	4	1.25	0	50.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001166	Oas1c	ENSMUST00000130045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001166	Oas1c	ENSMUST00000117193	ENSMUSP00000112584	TRANSLATION	protein_coding	-	CCDS19626.1	1	362	11	5.95	0.5	247.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042078	Svop	ENSMUST00000134790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042078	Svop	ENSMUST00000150106	ENSMUSP00000117724	TRANSLATION	protein_coding	stop	-	5	172	0	1.11	0	0	4	-4,-1	-	-	-1	MINOR
ENSMUSG00000042078	Svop	ENSMUST00000140151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042078	Svop	ENSMUST00000149480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042078	Svop	ENSMUST00000058472	ENSMUSP00000050730	TRANSLATION	protein_coding	-	CCDS39220.1	1	548	0	6.12	11.7	141.4	13	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000091903	Gm6460	ENSMUST00000163787	ENSMUSP00000131216	TRANSLATION	protein_coding	-	CCDS51413.1	1	157	0	0	0.5	81.6	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000091903	Gm6460	ENSMUST00000088616	ENSMUSP00000085987	TRANSLATION	protein_coding	-	-	1	199	0	0	0.5	81.6	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000072763	5430403G16Rik	ENSMUST00000092720	ENSMUSP00000090395	TRANSLATION	protein_coding	-	-	5	667	76	2	0	454.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029096	Htra3	ENSMUST00000200810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029096	Htra3	ENSMUST00000114233	ENSMUSP00000109871	TRANSLATION	protein_coding	-	CCDS39071.1	1	363	9	6.66	1.5	171.3	0	4,-1	-	-	10.74	MINOR
ENSMUSG00000029096	Htra3	ENSMUST00000201028	ENSMUSP00000144597	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	1	0	34.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029096	Htra3	ENSMUST00000087629	ENSMUSP00000084910	TRANSLATION	protein_coding	-	CCDS19233.1	1	459	9	9.16	1.5	209	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029096	Htra3	ENSMUST00000137935	ENSMUSP00000144051	TRANSLATION	protein_coding	stop	-	3	41	2	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029096	Htra3	ENSMUST00000129459	ENSMUSP00000144550	TRANSLATION	protein_coding	stop	-	2	53	3	1.33	0	28.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029431	B3gnt4	ENSMUST00000031384	ENSMUSP00000031384	TRANSLATION	protein_coding	-	CCDS19665.1	-	350	0	0	1.5	141.6	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029468	P2rx7	ENSMUST00000197102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029468	P2rx7	ENSMUST00000199281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029468	P2rx7	ENSMUST00000031425	ENSMUSP00000031425	TRANSLATION	protein_coding	-	CCDS19651.1	1	442	0	9.4	0.5	519.5	5	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000029468	P2rx7	ENSMUST00000199371	ENSMUSP00000158311	TRANSLATION	protein_coding	-	-	1	592	0	9	1.5	495.4	4	-4,-7	-	-	9.928	MINOR
ENSMUSG00000029468	P2rx7	ENSMUST00000197042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029468	P2rx7	ENSMUST00000121489	ENSMUSP00000112440	TRANSLATION	protein_coding	-	CCDS51644.1	1	431	0	9.4	0.5	519.5	5	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000029468	P2rx7	ENSMUST00000100737	ENSMUSP00000098303	TRANSLATION	protein_coding	-	CCDS19652.1	1	595	0	9.4	3.9	519.5	5	-4,-6	-	-	13	PRINCIPAL:4
ENSMUSG00000029468	P2rx7	ENSMUST00000086247	ENSMUSP00000083425	TRANSLATION	protein_coding	-	CCDS19653.1	1	153	0	2.71	0.5	126.9	2	-4,-6	-	-	0	MINOR
ENSMUSG00000029524	Sirt4	ENSMUST00000131121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029524	Sirt4	ENSMUST00000112066	ENSMUSP00000107697	TRANSLATION	protein_coding	-	CCDS51628.1	1	333	30	1.68	0.5	183.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000029524	Sirt4	ENSMUST00000154729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029524	Sirt4	ENSMUST00000148139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029524	Sirt4	ENSMUST00000127479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029524	Sirt4	ENSMUST00000112067	ENSMUSP00000107698	TRANSLATION	protein_coding	-	CCDS51628.1	1	333	30	1.68	0.5	183.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035780	Ugt2a3	ENSMUST00000031195	ENSMUSP00000031195	TRANSLATION	protein_coding	-	CCDS19387.1	1	534	13	3.6	0.5	770.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036693	Nop14	ENSMUST00000152393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036693	Nop14	ENSMUST00000041364	ENSMUSP00000038382	TRANSLATION	protein_coding	-	CCDS19218.1	1	860	0	0	0.5	908.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036693	Nop14	ENSMUST00000201897	ENSMUSP00000143989	TRANSLATION	protein_coding	start	-	3	129	0	0	0	145.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000117388	ENSMUSP00000113035	TRANSLATION	protein_coding	-	CCDS51524.1	1	728	7	7.838	1.5	226	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029228	Lnx1	ENSMUST00000113531	ENSMUSP00000109159	TRANSLATION	protein_coding	-	CCDS51522.1	1	569	0	6.538	0.5	197.7	0	-4,-6	-	-	7.704	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000127396	ENSMUSP00000120886	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000153543	ENSMUSP00000121094	TRANSLATION	protein_coding	-	CCDS51522.1	5	569	0	6.538	0.5	197.7	0	-4,-6	-	-	7.704	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000121690	ENSMUSP00000113565	TRANSLATION	protein_coding	-	CCDS51523.1	1	618	0	6.64	1.5	197.7	0	4,-1	-	-	7.908	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000087161	ENSMUSP00000084405	TRANSLATION	protein_coding	-	CCDS51524.1	5	728	7	7.838	1.5	226	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029228	Lnx1	ENSMUST00000140084	ENSMUSP00000117935	TRANSLATION	protein_coding	start/stop	-	5	322	0	3.74	0	124.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000039744	ENSMUSP00000040098	TRANSLATION	protein_coding	-	CCDS19347.1	1	628	0	6.838	1.5	197.7	0	4,-1	-	-	8.304	MINOR
ENSMUSG00000029228	Lnx1	ENSMUST00000117525	ENSMUSP00000113837	TRANSLATION	protein_coding	-	CCDS19347.1	1	628	0	6.838	1.5	197.7	0	4,-1	-	-	8.304	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000167225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029713	Gnb2	ENSMUST00000111023	ENSMUSP00000106652	TRANSLATION	protein_coding	-	-	5	296	0	7.33	0	160	0	-4,-1	-	-	9	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000125868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029713	Gnb2	ENSMUST00000111020	ENSMUSP00000106649	TRANSLATION	protein_coding	-	-	5	296	0	7.33	0	160	0	-4,-1	-	-	9	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000143495	ENSMUSP00000126823	TRANSLATION	protein_coding	-	-	5	240	0	5.5	0	120.6	0	-4,-5	-	-	3.636	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000111027	ENSMUSP00000106656	TRANSLATION	protein_coding	-	-	5	382	0	8.83	0	160	0	-4,-2	-	-	12	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000168746	ENSMUSP00000132908	TRANSLATION	protein_coding	-	-	5	240	0	5.5	0	120.6	0	-4,-5	-	-	3.636	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000142252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029713	Gnb2	ENSMUST00000144667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029713	Gnb2	ENSMUST00000031726	ENSMUSP00000031726	TRANSLATION	protein_coding	-	CCDS19769.1	1	340	0	8.83	21.5	160	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029713	Gnb2	ENSMUST00000150063	ENSMUSP00000129353	TRANSLATION	protein_coding	-	CCDS19769.1	1	340	0	8.83	21.5	160	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029713	Gnb2	ENSMUST00000145238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029713	Gnb2	ENSMUST00000132525	ENSMUSP00000119725	TRANSLATION	protein_coding	stop	-	3	227	0	6.83	0	84.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000170293	ENSMUSP00000128038	TRANSLATION	protein_coding	-	-	5	296	0	7.33	0	160	0	-4,-1	-	-	9	MINOR
ENSMUSG00000029713	Gnb2	ENSMUST00000140139	ENSMUSP00000121942	TRANSLATION	protein_coding	stop	-	5	188	0	5.83	0	60.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039191	Rbpj	ENSMUST00000200856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039191	Rbpj	ENSMUST00000087360	ENSMUSP00000084618	TRANSLATION	protein_coding	-	CCDS51503.1	5	485	7	9.83	3.7	425.3	0	-4,-2	-	-	18.948	MINOR
ENSMUSG00000039191	Rbpj	ENSMUST00000037618	ENSMUSP00000040694	TRANSLATION	protein_coding	-	CCDS19292.1	1	526	7	9.83	1.5	425.3	0	-4,-2	-	-	18.176	MINOR
ENSMUSG00000039191	Rbpj	ENSMUST00000201912	ENSMUSP00000143866	TRANSLATION	protein_coding	-	CCDS80283.1	1	507	7	9.83	0.5	425.3	0	-1,0	-	-	18	MINOR
ENSMUSG00000039191	Rbpj	ENSMUST00000201928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039191	Rbpj	ENSMUST00000202092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039191	Rbpj	ENSMUST00000201883	ENSMUSP00000143846	TRANSLATION	protein_coding	-	-	1	465	7	9.33	12.4	425.3	0	-4,-6	-	-	20.998	ALTERNATIVE:1
ENSMUSG00000039191	Rbpj	ENSMUST00000201701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039191	Rbpj	ENSMUST00000113865	ENSMUSP00000109496	TRANSLATION	protein_coding	-	CCDS51504.1	1	487	7	9.83	9.6	425.3	0	-4,-7	-	-	21.016	PRINCIPAL:2
ENSMUSG00000039191	Rbpj	ENSMUST00000201991	ENSMUSP00000144617	TRANSLATION	protein_coding	stop	-	5	180	7	3.83	0	174.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039191	Rbpj	ENSMUST00000201721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039191	Rbpj	ENSMUST00000202476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038525	Armc10	ENSMUST00000146599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038525	Armc10	ENSMUST00000148873	ENSMUSP00000120269	TRANSLATION	protein_coding	stop	-	1	292	0	0	0	332.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000038525	Armc10	ENSMUST00000139521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038525	Armc10	ENSMUST00000072896	ENSMUSP00000072669	TRANSLATION	protein_coding	-	CCDS19104.1	1	306	0	0	3.9	340.2	0	-3,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000038525	Armc10	ENSMUST00000095495	ENSMUSP00000093149	TRANSLATION	protein_coding	-	-	1	238	0	0	0	255.1	0	-3,-6	-	-	0.894	MINOR
ENSMUSG00000091635	Vmn2r13	ENSMUST00000053253	ENSMUSP00000052977	TRANSLATION	protein_coding	-	CCDS51599.1	5	831	4	3	0.5	368.6	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000033773	Rpap2	ENSMUST00000147284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033773	Rpap2	ENSMUST00000065422	ENSMUSP00000070209	TRANSLATION	protein_coding	-	CCDS19506.1	1	614	3	2.23	0.5	81.9	0	-4,-7	-	-	14.61	PRINCIPAL:3
ENSMUSG00000033773	Rpap2	ENSMUST00000129483	ENSMUSP00000142510	TRANSLATION	protein_coding	stop	-	3	82	3	1.63	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033773	Rpap2	ENSMUST00000112651	ENSMUSP00000108270	TRANSLATION	protein_coding	-	CCDS71631.1	1	537	3	2.03	0.5	81.9	0	-4,-5	-	-	14.07	ALTERNATIVE:2
ENSMUSG00000033773	Rpap2	ENSMUST00000112655	ENSMUSP00000108274	TRANSLATION	protein_coding	-	CCDS71630.1	1	570	3	2.23	0.5	81.9	0	-4,-7	-	-	14.61	ALTERNATIVE:2
ENSMUSG00000033773	Rpap2	ENSMUST00000112650	ENSMUSP00000108269	TRANSLATION	protein_coding	-	CCDS51589.1	1	489	3	2.03	0.5	81.9	0	-4,-5	-	-	14.07	ALTERNATIVE:2
ENSMUSG00000033773	Rpap2	ENSMUST00000150074	ENSMUSP00000121306	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033773	Rpap2	ENSMUST00000112654	ENSMUSP00000108273	TRANSLATION	protein_coding	-	CCDS51588.1	1	568	3	2.23	0.5	81.9	0	-4,-7	-	-	14.61	ALTERNATIVE:2
ENSMUSG00000029298	Gbp9	ENSMUST00000100961	ENSMUSP00000098521	TRANSLATION	protein_coding	-	CCDS39191.1	1	619	16	8.4	0.5	759.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029298	Gbp9	ENSMUST00000031238	ENSMUSP00000031238	TRANSLATION	protein_coding	-	CCDS39191.1	1	619	16	8.4	0.5	759.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029298	Gbp9	ENSMUST00000196820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029298	Gbp9	ENSMUST00000199453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053553	3110082I17Rik	ENSMUST00000066052	ENSMUSP00000069230	TRANSLATION	protein_coding	-	CCDS51684.1	1	195	0	0	0.5	79.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053553	3110082I17Rik	ENSMUST00000197512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053553	3110082I17Rik	ENSMUST00000196267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053553	3110082I17Rik	ENSMUST00000198474	ENSMUSP00000142949	TRANSLATION	protein_coding	-	-	2	178	0	0	0	40.7	0	-4,-5	-	-	3.066	MINOR
ENSMUSG00000029660	Tex26	ENSMUST00000201610	ENSMUSP00000143837	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029660	Tex26	ENSMUST00000202677	ENSMUSP00000144077	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029660	Tex26	ENSMUST00000201454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029660	Tex26	ENSMUST00000201683	ENSMUSP00000143851	TRANSLATION	protein_coding	-	CCDS51707.1	1	296	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000029660	Tex26	ENSMUST00000031667	ENSMUSP00000031667	TRANSLATION	protein_coding	-	CCDS80476.1	1	295	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000029660	Tex26	ENSMUST00000202920	ENSMUSP00000143863	TRANSLATION	protein_coding	-	CCDS80477.1	1	211	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029660	Tex26	ENSMUST00000200985	ENSMUSP00000144687	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037720	Tmem33	ENSMUST00000037918	ENSMUSP00000042852	TRANSLATION	protein_coding	-	CCDS19317.1	1	247	0	0	17	321.9	4	-4,-7	-	-	10	PRINCIPAL:3
ENSMUSG00000037720	Tmem33	ENSMUST00000162543	ENSMUSP00000124765	TRANSLATION	protein_coding	-	-	1	126	0	0	0	127.8	1	-4,-7	-	-	0	MINOR
ENSMUSG00000037720	Tmem33	ENSMUST00000202324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037720	Tmem33	ENSMUST00000161233	ENSMUSP00000124623	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	33	0	0,-4	-	-	-1	MINOR
ENSMUSG00000037720	Tmem33	ENSMUST00000161369	ENSMUSP00000124390	TRANSLATION	protein_coding	-	CCDS19317.1	1	247	0	0	17	321.9	4	-4,-7	-	-	10	PRINCIPAL:3
ENSMUSG00000037720	Tmem33	ENSMUST00000201979	ENSMUSP00000144531	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0	0	29.2	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000037720	Tmem33	ENSMUST00000163028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037720	Tmem33	ENSMUST00000162074	ENSMUSP00000123834	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037720	Tmem33	ENSMUST00000160352	ENSMUSP00000124766	TRANSLATION	protein_coding	-	CCDS51511.1	1	246	0	0	17	321.9	4	-4,-7	-	-	10	ALTERNATIVE:1
ENSMUSG00000063646	Jakmip1	ENSMUST00000137019	ENSMUSP00000122584	TRANSLATION	protein_coding	stop	-	1	339	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000152445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063646	Jakmip1	ENSMUST00000126527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063646	Jakmip1	ENSMUST00000121010	ENSMUSP00000113624	TRANSLATION	protein_coding	-	-	5	831	0	0	8.3	272.9	0	-4,-5	-	-	8.919	ALTERNATIVE:1
ENSMUSG00000063646	Jakmip1	ENSMUST00000212047	ENSMUSP00000148287	TRANSLATION	protein_coding	-	-	5	194	0	0	0	244.9	0	-4,-5	-	-	4.32	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000172917	ENSMUSP00000133913	TRANSLATION	protein_coding	stop	-	3	182	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000173836	ENSMUSP00000133767	TRANSLATION	protein_coding	stop	-	2	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000174097	ENSMUSP00000133770	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000201223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063646	Jakmip1	ENSMUST00000147014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063646	Jakmip1	ENSMUST00000172940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063646	Jakmip1	ENSMUST00000043794	ENSMUSP00000038504	TRANSLATION	protein_coding	-	CCDS19246.1	1	626	0	0	8.5	257	0	-4,-5	-	-	8.046	PRINCIPAL:2
ENSMUSG00000063646	Jakmip1	ENSMUST00000174629	ENSMUSP00000134288	TRANSLATION	protein_coding	-	-	5	646	0	0	0	258.9	0	-4,-5	-	-	5.16	MINOR
ENSMUSG00000063646	Jakmip1	ENSMUST00000173048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063646	Jakmip1	ENSMUST00000208852	ENSMUSP00000146844	TRANSLATION	protein_coding	start	-	5	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079659	Tmem243	ENSMUST00000198935	ENSMUSP00000143141	TRANSLATION	protein_coding	-	-	1	15	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079659	Tmem243	ENSMUST00000115365	ENSMUSP00000111022	TRANSLATION	protein_coding	-	CCDS39011.1	2	118	0	0	13.8	230.9	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000079659	Tmem243	ENSMUST00000196029	ENSMUSP00000142772	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079659	Tmem243	ENSMUST00000200542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092073	Gm6205	ENSMUST00000190001	ENSMUSP00000139603	TRANSLATION	protein_coding	-	-	5	359	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000092073	Gm6205	ENSMUST00000165424	ENSMUSP00000131590	TRANSLATION	protein_coding	-	-	5	359	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000034310	Tmem132d	ENSMUST00000200136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034310	Tmem132d	ENSMUST00000200316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034310	Tmem132d	ENSMUST00000044441	ENSMUSP00000043633	TRANSLATION	protein_coding	-	CCDS39287.1	1	1097	0	0	2.7	801.5	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000038552	Fndc4	ENSMUST00000200845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038552	Fndc4	ENSMUST00000172435	ENSMUSP00000127404	TRANSLATION	protein_coding	-	CCDS19181.1	1	231	0	2.45	4.1	46.1	1	0,-4	-	-	12.976	PRINCIPAL:1
ENSMUSG00000038552	Fndc4	ENSMUST00000202158	ENSMUSP00000144229	TRANSLATION	nonsense_mediated_decay	start	-	5	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038552	Fndc4	ENSMUST00000041266	ENSMUSP00000047185	TRANSLATION	protein_coding	-	CCDS19181.1	1	231	0	2.45	4.1	46.1	1	0,-4	-	-	12.976	PRINCIPAL:1
ENSMUSG00000038552	Fndc4	ENSMUST00000201906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038552	Fndc4	ENSMUST00000201417	ENSMUSP00000144142	TRANSLATION	protein_coding	stop	-	2	119	0	2	0	46.3	0	0,-4	-	-	-1	MINOR
ENSMUSG00000038552	Fndc4	ENSMUST00000202615	ENSMUSP00000144195	TRANSLATION	protein_coding	stop	-	5	220	0	2.45	0	46.1	1	0,-4	-	-	-1	MINOR
ENSMUSG00000049265	Kcnk3	ENSMUST00000197428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049265	Kcnk3	ENSMUST00000066295	ENSMUSP00000098987	TRANSLATION	protein_coding	-	CCDS19160.1	1	409	0	0.88	1.5	136.5	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052776	Oas1a	ENSMUST00000080322	ENSMUSP00000079198	TRANSLATION	protein_coding	-	CCDS19630.1	1	367	13	5	1.5	325.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039156	Stim2	ENSMUST00000202342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039156	Stim2	ENSMUST00000201469	ENSMUSP00000143855	TRANSLATION	protein_coding	-	-	5	754	6	8.965	1.2	181.9	1	-2,0	-	-	17.232	ALTERNATIVE:2
ENSMUSG00000039156	Stim2	ENSMUST00000200873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039156	Stim2	ENSMUST00000117661	ENSMUSP00000113174	TRANSLATION	protein_coding	-	CCDS39089.2	1	746	6	9.13	2.7	189.2	1	-2,0	-	-	18	PRINCIPAL:2
ENSMUSG00000039156	Stim2	ENSMUST00000201198	ENSMUSP00000144078	TRANSLATION	protein_coding	start	-	1	384	0	2.33	0	100.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053134	Supt7l	ENSMUST00000201692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053134	Supt7l	ENSMUST00000200721	ENSMUSP00000144294	TRANSLATION	protein_coding	-	-	5	363	0	0	0	77.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000053134	Supt7l	ENSMUST00000065388	ENSMUSP00000067337	TRANSLATION	protein_coding	-	CCDS19186.1	1	412	0	0	12.8	77.1	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000053134	Supt7l	ENSMUST00000202932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053134	Supt7l	ENSMUST00000201769	ENSMUSP00000144065	TRANSLATION	protein_coding	-	CCDS19186.1	1	412	0	0	12.8	77.1	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000053134	Supt7l	ENSMUST00000202421	ENSMUSP00000143795	TRANSLATION	protein_coding	-	-	1	344	0	0	0	77.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000029156	Sgcb	ENSMUST00000081170	ENSMUSP00000079937	TRANSLATION	protein_coding	-	CCDS19344.1	1	320	0	0	2.7	217.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029156	Sgcb	ENSMUST00000201416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038011	Dnah10	ENSMUST00000196708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038011	Dnah10	ENSMUST00000126998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038011	Dnah10	ENSMUST00000058440	ENSMUSP00000062995	TRANSLATION	protein_coding	-	CCDS51649.1	5	4591	61	36.83	0.5	3093.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038011	Dnah10	ENSMUST00000197824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038011	Dnah10	ENSMUST00000141137	ENSMUSP00000114593	TRANSLATION	protein_coding	-	-	5	4534	61	36.83	0	3018	0	-4,-5	-	-	13.464	MINOR
ENSMUSG00000038011	Dnah10	ENSMUST00000198055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036596	Cpz	ENSMUST00000132959	ENSMUSP00000123537	TRANSLATION	protein_coding	stop	-	5	102	0	0.68	0	33.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000036596	Cpz	ENSMUST00000038676	ENSMUSP00000039804	TRANSLATION	protein_coding	-	CCDS19229.1	1	654	8	7.82	0.5	367.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000079109	Pms2	ENSMUST00000128153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000110709	ENSMUSP00000106337	TRANSLATION	protein_coding	-	-	5	461	16	9.58	0	158.5	0	-4,-5	-	-	7.56	MINOR
ENSMUSG00000079109	Pms2	ENSMUST00000141942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079109	Pms2	ENSMUST00000148011	ENSMUSP00000119875	TRANSLATION	protein_coding	-	CCDS39375.1	1	859	16	12.41	0.5	238.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079109	Pms2	ENSMUST00000110710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000170083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000147910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000110707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000154781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079109	Pms2	ENSMUST00000128207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079109	Pms2	ENSMUST00000168085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079109	Pms2	ENSMUST00000126331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079109	Pms2	ENSMUST00000164999	ENSMUSP00000133062	TRANSLATION	protein_coding	start/stop	-	3	173	0	2.08	0	51.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016833	Mrps18c	ENSMUST00000112898	ENSMUSP00000108519	TRANSLATION	protein_coding	-	-	3	88	0	2.25	0	0	0	-3,-1	-	-	1.68	MINOR
ENSMUSG00000016833	Mrps18c	ENSMUST00000198453	ENSMUSP00000143166	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0.8	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000016833	Mrps18c	ENSMUST00000143477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016833	Mrps18c	ENSMUST00000140296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016833	Mrps18c	ENSMUST00000112901	ENSMUSP00000108522	TRANSLATION	protein_coding	-	-	1	128	0	3.858	0	77.7	0	-3,-1	-	-	10.656	MINOR
ENSMUSG00000016833	Mrps18c	ENSMUST00000016977	ENSMUSP00000016977	TRANSLATION	protein_coding	-	CCDS19468.1	1	143	0	4.41	1.5	80.9	0	-3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000005374	Tbl2	ENSMUST00000201780	ENSMUSP00000144259	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000005374	Tbl2	ENSMUST00000139565	ENSMUSP00000120685	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000005374	Tbl2	ENSMUST00000153183	ENSMUSP00000115011	TRANSLATION	protein_coding	-	CCDS19735.1	1	442	0	3.82	1.5	63.4	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000005374	Tbl2	ENSMUST00000152013	ENSMUSP00000118691	TRANSLATION	protein_coding	stop	-	3	190	0	2.64	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005374	Tbl2	ENSMUST00000005508	ENSMUSP00000005508	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	1.2	0	37.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000050552	Lamtor4	ENSMUST00000062067	ENSMUSP00000056693	TRANSLATION	protein_coding	-	CCDS39342.1	1	99	0	0	7.6	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000050552	Lamtor4	ENSMUST00000160157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047635	2810006K23Rik	ENSMUST00000077376	ENSMUSP00000076594	TRANSLATION	protein_coding	-	CCDS51647.1	1	184	0	1.8	0.5	74.5	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000047635	2810006K23Rik	ENSMUST00000111477	ENSMUSP00000107102	TRANSLATION	protein_coding	-	CCDS51648.1	1	128	0	1	0.5	37.9	0	-2,0	-	-	6.39	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000094578	ENSMUSP00000092157	TRANSLATION	protein_coding	-	CCDS51573.1	5	1230	0	8.9616	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035325	Sec31a	ENSMUST00000182144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035325	Sec31a	ENSMUST00000182812	ENSMUSP00000138507	TRANSLATION	protein_coding	start/stop	-	5	364	0	0.99	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000182433	ENSMUSP00000138366	TRANSLATION	protein_coding	start	-	1	264	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000182002	ENSMUSP00000138428	TRANSLATION	protein_coding	start/stop	-	2	296	0	0.89	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000182664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035325	Sec31a	ENSMUST00000182886	ENSMUSP00000138213	TRANSLATION	protein_coding	-	-	5	1191	0	8.6016	0.5	0	0	-4,-5	-	-	5.28	ALTERNATIVE:2
ENSMUSG00000035325	Sec31a	ENSMUST00000182850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035325	Sec31a	ENSMUST00000182171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035325	Sec31a	ENSMUST00000183247	ENSMUSP00000138129	TRANSLATION	protein_coding	start/stop	-	3	248	0	2.007	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000182988	ENSMUSP00000138571	TRANSLATION	protein_coding	start	-	5	934	0	5.1166	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035325	Sec31a	ENSMUST00000182569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037426	Depdc5	ENSMUST00000049780	ENSMUSP00000052807	TRANSLATION	protein_coding	-	CCDS19197.1	1	1085	0	0	0.5	381.2	0	-4,-6	-	-	3.798	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000150130	ENSMUSP00000116704	TRANSLATION	protein_coding	stop	-	2	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000120902	ENSMUSP00000113980	TRANSLATION	protein_coding	-	-	5	1569	0	0	7.5	417.9	0	-4,-6	-	-	9	ALTERNATIVE:1
ENSMUSG00000037426	Depdc5	ENSMUST00000118698	ENSMUSP00000112906	TRANSLATION	protein_coding	stop	-	5	205	0	0	0	157.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000195980	ENSMUSP00000143228	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	0	0	47.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000202927	ENSMUSP00000144461	TRANSLATION	protein_coding	stop	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000130461	ENSMUSP00000118681	TRANSLATION	protein_coding	start/stop	-	5	206	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000139098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037426	Depdc5	ENSMUST00000141812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037426	Depdc5	ENSMUST00000087897	ENSMUSP00000085207	TRANSLATION	protein_coding	-	CCDS19196.1	1	1530	0	0	1.5	417.9	0	-4,-6	-	-	6.231	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000127560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037426	Depdc5	ENSMUST00000119705	ENSMUSP00000113862	TRANSLATION	protein_coding	-	CCDS51463.1	1	1591	0	0	7.5	417.9	0	-4,-6	-	-	9	PRINCIPAL:2
ENSMUSG00000037426	Depdc5	ENSMUST00000149350	ENSMUSP00000122461	TRANSLATION	protein_coding	stop	-	5	161	0	0	0	73.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000137169	ENSMUSP00000121089	TRANSLATION	protein_coding	start	-	5	976	0	0	0	36.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000201802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037426	Depdc5	ENSMUST00000124780	ENSMUSP00000120120	TRANSLATION	nonsense_mediated_decay	start	-	5	657	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000125574	ENSMUSP00000122173	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	45.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000238200	ENSMUSP00000158651	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000201836	ENSMUSP00000144004	TRANSLATION	nonsense_mediated_decay	start	-	3	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037426	Depdc5	ENSMUST00000139463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036980	Taf6	ENSMUST00000123415	ENSMUSP00000122534	TRANSLATION	protein_coding	stop	-	5	214	0	5.75	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036980	Taf6	ENSMUST00000110936	ENSMUSP00000106561	TRANSLATION	protein_coding	-	CCDS19795.1	1	678	0	15	7.5	219.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036980	Taf6	ENSMUST00000153117	ENSMUSP00000138335	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	2.75	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036980	Taf6	ENSMUST00000048698	ENSMUSP00000048016	TRANSLATION	protein_coding	-	CCDS19795.1	1	678	0	15	7.5	219.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036980	Taf6	ENSMUST00000200483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036980	Taf6	ENSMUST00000110937	ENSMUSP00000106562	TRANSLATION	protein_coding	-	-	5	636	0	13	0	219.4	0	-4,-5	-	-	7.998	MINOR
ENSMUSG00000036980	Taf6	ENSMUST00000139276	ENSMUSP00000116512	TRANSLATION	protein_coding	stop	-	5	55	0	1	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036980	Taf6	ENSMUST00000130473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040576	Tmem270	ENSMUST00000201316	ENSMUSP00000144496	TRANSLATION	protein_coding	-	CCDS80423.1	1	264	0	0	1.5	399.4	3	-1,1	-	-	6	PRINCIPAL:1
ENSMUSG00000040576	Tmem270	ENSMUST00000047305	ENSMUSP00000045190	TRANSLATION	protein_coding	-	CCDS39313.1	1	209	0	0	0.5	244.2	3	-1,1	-	-	0	MINOR
ENSMUSG00000002748	Baz1b	ENSMUST00000002825	ENSMUSP00000002825	TRANSLATION	protein_coding	-	CCDS19736.1	1	1479	8	2.8	1.5	316.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000002748	Baz1b	ENSMUST00000201894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002748	Baz1b	ENSMUST00000142307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002748	Baz1b	ENSMUST00000176793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002748	Baz1b	ENSMUST00000136947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029154	Cwh43	ENSMUST00000135820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029154	Cwh43	ENSMUST00000065543	ENSMUSP00000069563	TRANSLATION	protein_coding	-	-	1	613	0	0	0	0	10	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029154	Cwh43	ENSMUST00000031040	ENSMUSP00000031040	TRANSLATION	protein_coding	-	CCDS19341.1	1	699	0	0	3.9	0	12	-2,-5	-	-	1	PRINCIPAL:2
ENSMUSG00000079111	Kdelr2	ENSMUST00000110731	ENSMUSP00000106359	TRANSLATION	protein_coding	-	CCDS39369.1	1	212	0	0	19.5	190.2	0	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000095954	Gm3183	ENSMUST00000202911	ENSMUSP00000144236	TRANSLATION	protein_coding	-	-	1	189	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000095954	Gm3183	ENSMUST00000180076	ENSMUSP00000137076	TRANSLATION	protein_coding	-	-	5	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000095954	Gm3183	ENSMUST00000201703	ENSMUSP00000144382	TRANSLATION	protein_coding	-	-	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000029722	Agfg2	ENSMUST00000198657	ENSMUSP00000143273	TRANSLATION	protein_coding	start/stop	-	3	114	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000029722	Agfg2	ENSMUST00000100544	ENSMUSP00000098112	TRANSLATION	protein_coding	-	CCDS80443.1	1	490	4	3.2	1.5	85.4	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000029722	Agfg2	ENSMUST00000138604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029722	Agfg2	ENSMUST00000151839	ENSMUSP00000117351	TRANSLATION	protein_coding	stop	-	1	406	4	3.2	0	85.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029722	Agfg2	ENSMUST00000147518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029722	Agfg2	ENSMUST00000031736	ENSMUSP00000031736	TRANSLATION	protein_coding	-	CCDS19774.1	1	479	4	3.2	1.5	85.4	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000060183	Cxcl11	ENSMUST00000122808	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000060183	Cxcl11	ENSMUST00000077820	ENSMUSP00000137965	TRANSLATION	protein_coding	-	-	5	99	0	2.15	2.2	42.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029202	Pds5a	ENSMUST00000201673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000202698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201948	ENSMUSP00000144171	TRANSLATION	protein_coding	-	CCDS39099.1	5	1332	0	25.2	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029202	Pds5a	ENSMUST00000202648	ENSMUSP00000144463	TRANSLATION	protein_coding	start	-	3	140	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029202	Pds5a	ENSMUST00000202910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000031104	ENSMUSP00000031104	TRANSLATION	protein_coding	-	CCDS39099.1	5	1332	0	25.2	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029202	Pds5a	ENSMUST00000200766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000200790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000202107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029202	Pds5a	ENSMUST00000201420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049241	Hcar1	ENSMUST00000164267	ENSMUSP00000129280	TRANSLATION	protein_coding	-	CCDS19669.2	-	351	0	0.48	1.5	116.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058643	Speer4f1	ENSMUST00000076099	ENSMUSP00000075467	TRANSLATION	protein_coding	-	CCDS19098.1	1	258	0	0	0.5	63.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029206	Nsun7	ENSMUST00000031109	ENSMUSP00000031109	TRANSLATION	protein_coding	-	CCDS80290.1	5	705	0	2.92	0.5	27.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029206	Nsun7	ENSMUST00000200891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029206	Nsun7	ENSMUST00000201100	ENSMUSP00000144520	TRANSLATION	protein_coding	-	CCDS19314.1	5	700	0	2.92	0.5	27.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029206	Nsun7	ENSMUST00000202994	ENSMUSP00000144498	TRANSLATION	protein_coding	-	CCDS80291.1	1	691	0	2.32	0.5	0	0	-4,-5	-	-	4.77	MINOR
ENSMUSG00000028864	Hgf	ENSMUST00000195957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028864	Hgf	ENSMUST00000199900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028864	Hgf	ENSMUST00000196645	ENSMUSP00000142517	TRANSLATION	protein_coding	-	CCDS80213.1	1	723	2	15.15	8.8	592	0	3,-2	-	-	16.406	ALTERNATIVE:1
ENSMUSG00000028864	Hgf	ENSMUST00000199581	ENSMUSP00000143424	TRANSLATION	protein_coding	-	CCDS19097.1	1	728	2	15.15	8.8	601.9	0	3,-2	-	-	17	PRINCIPAL:3
ENSMUSG00000028864	Hgf	ENSMUST00000200189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028864	Hgf	ENSMUST00000030683	ENSMUSP00000030683	TRANSLATION	protein_coding	-	CCDS19097.1	1	728	2	15.15	8.8	601.9	0	3,-2	-	-	17	PRINCIPAL:3
ENSMUSG00000107011	Gm42906	ENSMUST00000202365	ENSMUSP00000143819	TRANSLATION	protein_coding,RT	stop	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000064156	Prol1	ENSMUST00000170832	ENSMUSP00000132678	TRANSLATION	protein_coding	-	CCDS51537.1	1	312	0	0	0.5	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000097392	Thoc2l	ENSMUST00000200034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097392	Thoc2l	ENSMUST00000196593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097392	Thoc2l	ENSMUST00000239420	ENSMUSP00000159295	TRANSLATION	protein_coding	-	CCDS51580.1	-	1589	0	0	1.5	460.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000097392	Thoc2l	ENSMUST00000197606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097392	Thoc2l	ENSMUST00000239307	ENSMUSP00000159241	TRANSLATION	protein_coding	-	CCDS51580.1	-	1589	0	0	1.5	460.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000097392	Thoc2l	ENSMUST00000181620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097392	Thoc2l	ENSMUST00000181418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097392	Thoc2l	ENSMUST00000096452	ENSMUSP00000130629	TRANSLATION	protein_coding	-	CCDS51580.1	2	1589	0	0	1.5	460.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029463	Fam216a	ENSMUST00000031419	ENSMUSP00000031419	TRANSLATION	protein_coding	-	CCDS39257.1	1	251	0	0	0.5	153.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067700	Gm5862	ENSMUST00000072286	ENSMUSP00000072133	TRANSLATION	protein_coding	-	CCDS59672.1	5	267	0	0	0.5	82.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000066952	Myo1h	ENSMUST00000152694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066952	Myo1h	ENSMUST00000128379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066952	Myo1h	ENSMUST00000124316	ENSMUSP00000118824	TRANSLATION	protein_coding	-	-	5	958	15	24.846	0	820	0	-4,-5	-	-	9.594	MINOR
ENSMUSG00000066952	Myo1h	ENSMUST00000196676	ENSMUSP00000144682	TRANSLATION	protein_coding	-	-	1	213	0	6.366	0	107.1	0	-4,-2	-	-	0	MINOR
ENSMUSG00000066952	Myo1h	ENSMUST00000125230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066952	Myo1h	ENSMUST00000196467	ENSMUSP00000144133	TRANSLATION	protein_coding	-	-	1	189	0	5.616	0	52.7	0	-4,-2	-	-	0	MINOR
ENSMUSG00000066952	Myo1h	ENSMUST00000199567	ENSMUSP00000144492	TRANSLATION	protein_coding	-	-	1	222	0	6.201	0	104	0	-4,-2	-	-	0	MINOR
ENSMUSG00000066952	Myo1h	ENSMUST00000169347	ENSMUSP00000132905	TRANSLATION	protein_coding	-	-	5	1038	15	26.846	0.5	893.4	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000066952	Myo1h	ENSMUST00000197773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066952	Myo1h	ENSMUST00000202006	ENSMUSP00000144110	TRANSLATION	protein_coding	-	CCDS51622.1	5	1022	15	26.846	2.9	893.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000037795	N4bp2	ENSMUST00000201503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037795	N4bp2	ENSMUST00000201489	ENSMUSP00000143807	TRANSLATION	protein_coding	-	CCDS19310.1	5	1678	9	3.475	0.5	116.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037795	N4bp2	ENSMUST00000202411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037795	N4bp2	ENSMUST00000201615	ENSMUSP00000144278	TRANSLATION	protein_coding	stop	-	1	1498	9	0.975	0	47.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037795	N4bp2	ENSMUST00000202934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037795	N4bp2	ENSMUST00000201044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037795	N4bp2	ENSMUST00000200843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037795	N4bp2	ENSMUST00000087264	ENSMUSP00000084519	TRANSLATION	protein_coding	-	CCDS19310.1	5	1678	9	3.475	0.5	116.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037795	N4bp2	ENSMUST00000202817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042216	Sgsm1	ENSMUST00000112324	ENSMUSP00000107943	TRANSLATION	protein_coding	-	-	1	257	0	2.75	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000042216	Sgsm1	ENSMUST00000156340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042216	Sgsm1	ENSMUST00000048112	ENSMUSP00000046544	TRANSLATION	protein_coding	-	CCDS39218.1	1	1093	0	7.8	7.5	240.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042216	Sgsm1	ENSMUST00000138266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042216	Sgsm1	ENSMUST00000145708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042216	Sgsm1	ENSMUST00000147856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042216	Sgsm1	ENSMUST00000140981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042216	Sgsm1	ENSMUST00000112325	ENSMUSP00000107944	TRANSLATION	protein_coding	-	CCDS57374.1	1	677	0	4.55	0.5	127	0	-4,-6	-	-	0	MINOR
ENSMUSG00000042216	Sgsm1	ENSMUST00000154248	ENSMUSP00000114932	TRANSLATION	protein_coding	stop	-	5	706	0	4.55	0	127	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042216	Sgsm1	ENSMUST00000057209	ENSMUSP00000084106	TRANSLATION	protein_coding	-	CCDS84935.1	1	806	0	6	0.5	113.2	0	-4,-6	-	-	2.4	MINOR
ENSMUSG00000040302	Rbm48	ENSMUST00000135809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040302	Rbm48	ENSMUST00000042753	ENSMUSP00000040952	TRANSLATION	protein_coding	-	CCDS19064.2	1	413	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000040302	Rbm48	ENSMUST00000124162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040302	Rbm48	ENSMUST00000121877	ENSMUSP00000112547	TRANSLATION	protein_coding	-	-	1	143	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000040302	Rbm48	ENSMUST00000176000	ENSMUSP00000135709	TRANSLATION	nonsense_mediated_decay	start	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029646	Cdx2	ENSMUST00000031650	ENSMUSP00000031650	TRANSLATION	protein_coding	-	CCDS19878.1	1	311	0	1.4	0.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040367	Lrrd1	ENSMUST00000044039	ENSMUSP00000038675	TRANSLATION	protein_coding	-	CCDS19068.1	1	853	0	2	1.5	132.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040367	Lrrd1	ENSMUST00000143027	ENSMUSP00000122668	TRANSLATION	protein_coding	stop	-	5	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038126	Mphosph9	ENSMUST00000031344	ENSMUSP00000031344	TRANSLATION	protein_coding	-	CCDS39277.1	5	1114	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000038126	Mphosph9	ENSMUST00000156745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038126	Mphosph9	ENSMUST00000142498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038126	Mphosph9	ENSMUST00000147737	ENSMUSP00000114795	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038126	Mphosph9	ENSMUST00000149933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038126	Mphosph9	ENSMUST00000130502	ENSMUSP00000120827	TRANSLATION	nonsense_mediated_decay	-	-	1	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038126	Mphosph9	ENSMUST00000156013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038126	Mphosph9	ENSMUST00000184951	ENSMUSP00000138982	TRANSLATION	protein_coding	-	CCDS71671.1	5	1144	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038126	Mphosph9	ENSMUST00000141203	ENSMUSP00000117437	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038126	Mphosph9	ENSMUST00000143476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038126	Mphosph9	ENSMUST00000128027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037890	Wdr19	ENSMUST00000203653	ENSMUSP00000144866	TRANSLATION	protein_coding	-	CCDS51509.1	1	1341	7	2.11	6.4	99.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000037890	Wdr19	ENSMUST00000204582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037890	Wdr19	ENSMUST00000041892	ENSMUSP00000038098	TRANSLATION	protein_coding	-	CCDS51509.1	1	1341	7	2.11	6.4	99.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000037890	Wdr19	ENSMUST00000204647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037890	Wdr19	ENSMUST00000203359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037890	Wdr19	ENSMUST00000203554	ENSMUSP00000144826	TRANSLATION	protein_coding	start	-	5	105	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037890	Wdr19	ENSMUST00000204375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037890	Wdr19	ENSMUST00000203676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029404	Arl6ip4	ENSMUST00000149835	ENSMUSP00000116269	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	52.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029404	Arl6ip4	ENSMUST00000196401	ENSMUSP00000142496	TRANSLATION	protein_coding	start	-	5	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029404	Arl6ip4	ENSMUST00000031351	ENSMUSP00000031351	TRANSLATION	protein_coding	-	CCDS19673.1	1	229	0	0	0.5	336.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029404	Arl6ip4	ENSMUST00000122394	ENSMUSP00000112506	TRANSLATION	protein_coding	-	-	5	200	0	0	0	291.5	0	-4,-7	-	-	3.324	MINOR
ENSMUSG00000029404	Arl6ip4	ENSMUST00000145667	ENSMUSP00000122377	TRANSLATION	protein_coding	stop	-	2	226	0	0	0	303.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039623	Ap5z1	ENSMUST00000197293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039623	Ap5z1	ENSMUST00000198967	ENSMUSP00000143040	TRANSLATION	protein_coding	stop	-	2	77	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039623	Ap5z1	ENSMUST00000196405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039623	Ap5z1	ENSMUST00000198135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039623	Ap5z1	ENSMUST00000197173	ENSMUSP00000142777	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039623	Ap5z1	ENSMUST00000038699	ENSMUSP00000041863	TRANSLATION	protein_coding	-	CCDS39361.1	1	807	0	0	1.5	141.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000039623	Ap5z1	ENSMUST00000196055	ENSMUSP00000143179	TRANSLATION	protein_coding	-	-	1	791	0	0	0	141.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029586	Spdye4b	ENSMUST00000031574	ENSMUSP00000031574	TRANSLATION	protein_coding	-	CCDS51688.1	1	236	0	0	0.5	200.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029586	Spdye4b	ENSMUST00000198090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029586	Spdye4b	ENSMUST00000197330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029586	Spdye4b	ENSMUST00000159781	ENSMUSP00000125524	TRANSLATION	protein_coding	-	CCDS51688.1	1	236	0	0	0.5	200.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000099863	1700031L13Rik	ENSMUST00000188072	ENSMUSP00000158901	TRANSLATION	protein_coding	-	-	5	52	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000099863	1700031L13Rik	ENSMUST00000186079	ENSMUSP00000158972	TRANSLATION	protein_coding	-	-	5	52	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000099863	1700031L13Rik	ENSMUST00000185607	ENSMUSP00000159020	TRANSLATION	protein_coding	-	-	3	52	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000099863	1700031L13Rik	ENSMUST00000185410	ENSMUSP00000159136	TRANSLATION	protein_coding	-	-	1	52	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000029516	Cit	ENSMUST00000148245	ENSMUSP00000119769	TRANSLATION	protein_coding	stop	-	5	181	1	3.13	0	46.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029516	Cit	ENSMUST00000146387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000128702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000137952	ENSMUSP00000122745	TRANSLATION	protein_coding	stop	-	5	175	1	2.8	0	40.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029516	Cit	ENSMUST00000051704	ENSMUSP00000062049	TRANSLATION	protein_coding	-	CCDS19597.1	1	2055	3	7.63	7.5	451.6	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000029516	Cit	ENSMUST00000153407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029516	Cit	ENSMUST00000147479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029516	Cit	ENSMUST00000122877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000145363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029516	Cit	ENSMUST00000123736	ENSMUSP00000134875	TRANSLATION	nonsense_mediated_decay	start	-	1	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029516	Cit	ENSMUST00000112008	ENSMUSP00000107639	TRANSLATION	protein_coding	-	-	5	2028	3	7.63	5.3	451.6	0	-4,-2	-	-	16.986	ALTERNATIVE:1
ENSMUSG00000029516	Cit	ENSMUST00000134609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000202734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000147330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000139881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029516	Cit	ENSMUST00000136780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029516	Cit	ENSMUST00000127976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029516	Cit	ENSMUST00000102560	ENSMUSP00000099620	TRANSLATION	protein_coding	-	-	5	2070	3	7.63	7.5	451.6	0	-4,-2	-	-	18	ALTERNATIVE:1
ENSMUSG00000029516	Cit	ENSMUST00000141101	ENSMUSP00000115802	TRANSLATION	protein_coding	-	-	5	2013	3	7.63	4.1	451.6	0	-4,-2	-	-	16.431	MINOR
ENSMUSG00000003161	Sri	ENSMUST00000003245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003161	Sri	ENSMUST00000149420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003161	Sri	ENSMUST00000148633	ENSMUSP00000118221	TRANSLATION	protein_coding	-	CCDS39009.1	1	198	17	5.33	10.3	60.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003161	Sri	ENSMUST00000088786	ENSMUSP00000086165	TRANSLATION	protein_coding	-	CCDS19079.1	1	183	17	4.83	5.1	60.7	0	-4,-5	-	-	18.321	MINOR
ENSMUSG00000003161	Sri	ENSMUST00000145119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003161	Sri	ENSMUST00000197065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003161	Sri	ENSMUST00000144265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046607	Hrk	ENSMUST00000054836	ENSMUSP00000057532	TRANSLATION	protein_coding	-	CCDS39236.1	1	92	0	0.6	1.5	184.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046607	Hrk	ENSMUST00000184679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029452	Tmem116	ENSMUST00000060004	ENSMUSP00000054232	TRANSLATION	protein_coding	-	CCDS19635.1	1	209	0	0	0.5	0	4	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000029452	Tmem116	ENSMUST00000172722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029452	Tmem116	ENSMUST00000156080	ENSMUSP00000121579	TRANSLATION	protein_coding	-	-	1	146	0	0	0	0	2	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029452	Tmem116	ENSMUST00000111795	ENSMUSP00000144614	TRANSLATION	protein_coding	-	-	1	152	0	0	0	0	4	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029452	Tmem116	ENSMUST00000145729	ENSMUSP00000144269	TRANSLATION	nonsense_mediated_decay	start	-	2	104	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029452	Tmem116	ENSMUST00000124247	ENSMUSP00000134334	TRANSLATION	nonsense_mediated_decay	start	-	1	121	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029452	Tmem116	ENSMUST00000094357	ENSMUSP00000091917	TRANSLATION	protein_coding	-	CCDS51640.1	5	364	0	0	2.9	0	9	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029452	Tmem116	ENSMUST00000031405	ENSMUSP00000031405	TRANSLATION	protein_coding	-	CCDS51641.1	1	329	0	0	0.5	0	8	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029452	Tmem116	ENSMUST00000149966	ENSMUSP00000116328	TRANSLATION	protein_coding	stop	-	5	131	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000029452	Tmem116	ENSMUST00000150805	ENSMUSP00000143523	TRANSLATION	protein_coding	start	-	1	401	0	0	0	0	7	-4,-2	-	-	-1	MINOR
ENSMUSG00000004948	Zp3	ENSMUST00000005073	ENSMUSP00000005073	TRANSLATION	protein_coding	-	CCDS19749.1	1	424	0	6.4	0.5	148.7	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000004948	Zp3	ENSMUST00000131563	ENSMUSP00000120447	TRANSLATION	nonsense_mediated_decay	start	-	5	136	0	2	0	51.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015652	Steap1	ENSMUST00000169542	ENSMUSP00000126005	TRANSLATION	protein_coding	start	-	5	109	0	0	0	32.1	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000015652	Steap1	ENSMUST00000015796	ENSMUSP00000015796	TRANSLATION	protein_coding	-	CCDS19077.1	1	339	0	0	6.3	56.5	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000072845	Tmprss11a	ENSMUST00000101073	ENSMUSP00000098634	TRANSLATION	protein_coding	-	CCDS51531.1	1	389	6	4.3	1.5	303.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072845	Tmprss11a	ENSMUST00000198504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061184	Tmprss11c	ENSMUST00000196462	ENSMUSP00000142902	TRANSLATION	protein_coding	-	-	5	418	6	4	1	313.7	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061184	Tmprss11c	ENSMUST00000059424	ENSMUSP00000062915	TRANSLATION	protein_coding	-	CCDS19380.1	1	431	6	4	0.5	313.7	1	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000097271	Gm9903	ENSMUST00000181102	ENSMUSP00000144476	TRANSLATION	protein_coding	-	-	1	129	0	0	0	0	0	-1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000029125	Stx18	ENSMUST00000201285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029125	Stx18	ENSMUST00000147667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029125	Stx18	ENSMUST00000202412	ENSMUSP00000144088	TRANSLATION	protein_coding	stop	-	3	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029125	Stx18	ENSMUST00000141286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029125	Stx18	ENSMUST00000042146	ENSMUSP00000038205	TRANSLATION	protein_coding	-	CCDS80270.1	1	308	0	0	0.5	75.4	1	-4,-7	-	-	6	MINOR
ENSMUSG00000029125	Stx18	ENSMUST00000031008	ENSMUSP00000031008	TRANSLATION	protein_coding	-	CCDS71583.1	1	308	0	0	0.5	75.4	0	-4,-7	-	-	6	MINOR
ENSMUSG00000029125	Stx18	ENSMUST00000114126	ENSMUSP00000109761	TRANSLATION	protein_coding	-	CCDS19250.1	1	334	0	0	7.5	75.4	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029125	Stx18	ENSMUST00000146864	ENSMUSP00000143909	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029125	Stx18	ENSMUST00000154929	ENSMUSP00000118218	TRANSLATION	protein_coding	stop	-	5	252	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039206	Daglb	ENSMUST00000174273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039206	Daglb	ENSMUST00000155383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039206	Daglb	ENSMUST00000199577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039206	Daglb	ENSMUST00000045593	ENSMUSP00000043088	TRANSLATION	protein_coding	-	CCDS39370.1	1	669	0	2.53	5.1	57.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000005299	Letm1	ENSMUST00000200827	ENSMUSP00000144491	TRANSLATION	nonsense_mediated_decay	start	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005299	Letm1	ENSMUST00000149886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005299	Letm1	ENSMUST00000144071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005299	Letm1	ENSMUST00000005431	ENSMUSP00000005431	TRANSLATION	protein_coding	-	CCDS19207.1	1	738	3	3.48	0.5	368.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000005299	Letm1	ENSMUST00000201981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005299	Letm1	ENSMUST00000148451	ENSMUSP00000143805	TRANSLATION	protein_coding	-	-	2	47	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000150921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041264	Uspl1	ENSMUST00000200759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041264	Uspl1	ENSMUST00000050472	ENSMUSP00000050172	TRANSLATION	protein_coding	-	CCDS51704.1	1	1089	10	0	0.5	1083.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041264	Uspl1	ENSMUST00000121416	ENSMUSP00000113894	TRANSLATION	protein_coding	-	CCDS51706.1	1	890	8	0	0.5	1083.4	0	-3,-5	-	-	10.668	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000139474	ENSMUSP00000117221	TRANSLATION	protein_coding	stop	-	3	40	2	0	0	33.9	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000149896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041264	Uspl1	ENSMUST00000126168	ENSMUSP00000120808	TRANSLATION	nonsense_mediated_decay	-	-	1	118	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000119685	ENSMUSP00000114104	TRANSLATION	protein_coding	-	CCDS71718.1	1	1075	10	0	0.5	1083.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041264	Uspl1	ENSMUST00000100410	ENSMUSP00000097978	TRANSLATION	protein_coding	-	CCDS39406.1	1	517	10	0	1.5	409.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000117878	ENSMUSP00000113176	TRANSLATION	protein_coding	-	CCDS51705.1	1	318	8	0	0.5	409.9	0	-3,-5	-	-	4.668	MINOR
ENSMUSG00000041264	Uspl1	ENSMUST00000201232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041264	Uspl1	ENSMUST00000122160	ENSMUSP00000113247	TRANSLATION	protein_coding	-	CCDS51704.1	1	1089	10	0	0.5	1083.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000006262	Mob1b	ENSMUST00000006424	ENSMUSP00000006424	TRANSLATION	protein_coding	-	CCDS39139.1	1	216	4	4.75	19.5	280.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000006262	Mob1b	ENSMUST00000155298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006262	Mob1b	ENSMUST00000125171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006262	Mob1b	ENSMUST00000113229	ENSMUSP00000108855	TRANSLATION	protein_coding	-	-	1	221	4	4.75	0	269.6	0	-4,-7	-	-	15.322	MINOR
ENSMUSG00000038970	Lmtk2	ENSMUST00000041804	ENSMUSP00000048238	TRANSLATION	protein_coding	-	CCDS39376.1	1	1471	4	4.36	0.5	179.8	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000029097	Trmt44	ENSMUST00000030980	ENSMUSP00000030980	TRANSLATION	protein_coding	-	CCDS19230.1	1	713	12	0	0.5	134	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029097	Trmt44	ENSMUST00000145930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029097	Trmt44	ENSMUST00000128195	ENSMUSP00000143908	TRANSLATION	protein_coding	start	-	2	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000114278	Gm49027	ENSMUST00000197682	ENSMUSP00000143145	TRANSLATION	protein_coding	-	-	5	44	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000114278	Gm49027	ENSMUST00000198565	ENSMUSP00000152978	TRANSLATION	protein_coding	-	-	3	44	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000053856	Dnajc5g	ENSMUST00000202760	ENSMUSP00000144548	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053856	Dnajc5g	ENSMUST00000201740	ENSMUSP00000144137	TRANSLATION	protein_coding	-	CCDS84862.1	3	139	0	2	0.5	89.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000053856	Dnajc5g	ENSMUST00000066544	ENSMUSP00000064587	TRANSLATION	protein_coding	-	CCDS19172.1	1	165	0	2	0.5	89.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000053856	Dnajc5g	ENSMUST00000202433	ENSMUSP00000143997	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000028998	Tomm7	ENSMUST00000030851	ENSMUSP00000030851	TRANSLATION	protein_coding	-	CCDS39026.1	1	55	0	0	18.2	56.5	0	-3,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000038199	Iqca1l	ENSMUST00000200634	ENSMUSP00000142624	TRANSLATION	nonsense_mediated_decay	-	-	1	239	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038199	Iqca1l	ENSMUST00000088302	ENSMUSP00000085642	TRANSLATION	protein_coding	-	CCDS51435.1	5	825	11	3.3	0.5	71.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038199	Iqca1l	ENSMUST00000198887	ENSMUSP00000142918	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038199	Iqca1l	ENSMUST00000198709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038199	Iqca1l	ENSMUST00000199185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029106	Add1	ENSMUST00000135321	ENSMUSP00000114984	TRANSLATION	protein_coding	start/stop	-	5	135	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029106	Add1	ENSMUST00000145986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029106	Add1	ENSMUST00000201810	ENSMUSP00000144673	TRANSLATION	protein_coding	start/stop	-	3	248	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029106	Add1	ENSMUST00000114338	ENSMUSP00000109977	TRANSLATION	protein_coding	-	CCDS39069.1	1	632	3	4.69	5.1	149.3	0	-4,-6	-	-	17	ALTERNATIVE:1
ENSMUSG00000029106	Add1	ENSMUST00000146295	ENSMUSP00000118539	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029106	Add1	ENSMUST00000114340	ENSMUSP00000109979	TRANSLATION	protein_coding	-	CCDS19216.1	5	735	3	4.69	3.9	149.3	0	-4,-6	-	-	16.414	PRINCIPAL:3
ENSMUSG00000029106	Add1	ENSMUST00000152805	ENSMUSP00000121402	TRANSLATION	protein_coding	start	-	5	160	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029106	Add1	ENSMUST00000201368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029106	Add1	ENSMUST00000137262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029106	Add1	ENSMUST00000147574	ENSMUSP00000116075	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029106	Add1	ENSMUST00000001108	ENSMUSP00000001108	TRANSLATION	protein_coding	-	CCDS51471.1	1	663	3	4.69	5.1	149.3	0	-4,-6	-	-	17	ALTERNATIVE:1
ENSMUSG00000029106	Add1	ENSMUST00000139044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029106	Add1	ENSMUST00000114335	ENSMUSP00000109974	TRANSLATION	protein_coding	-	-	5	660	3	4.69	5.1	149.3	0	-4,-6	-	-	17	ALTERNATIVE:1
ENSMUSG00000029106	Add1	ENSMUST00000052836	ENSMUSP00000052266	TRANSLATION	protein_coding	-	-	5	662	3	4.69	5.1	149.3	0	-4,-6	-	-	17	ALTERNATIVE:1
ENSMUSG00000029106	Add1	ENSMUST00000144226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035456	Prdm8	ENSMUST00000210477	ENSMUSP00000147333	TRANSLATION	protein_coding	-	CCDS39178.1	5	688	11	0.98	1.5	19.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035456	Prdm8	ENSMUST00000112959	ENSMUSP00000108583	TRANSLATION	protein_coding	-	CCDS39178.1	1	688	11	0.98	1.5	19.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039296	Spdye4a	ENSMUST00000160502	ENSMUSP00000123959	TRANSLATION	protein_coding	-	CCDS80456.1	1	173	0	0	1.5	85.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039296	Spdye4a	ENSMUST00000085733	ENSMUSP00000082882	TRANSLATION	protein_coding	-	CCDS39368.1	1	268	0	0	1.5	199.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000039296	Spdye4a	ENSMUST00000195900	ENSMUSP00000142788	TRANSLATION	protein_coding	-	-	5	231	0	0	1.5	199.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000106350	Gm4869	ENSMUST00000197549	ENSMUSP00000147930	TRANSLATION	protein_coding	-	-	5	984	11	8.05	0	363	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029648	Flt1	ENSMUST00000031653	ENSMUSP00000031653	TRANSLATION	protein_coding	-	CCDS19879.1	1	1333	21	23.75	0.5	522.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029648	Flt1	ENSMUST00000125272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029648	Flt1	ENSMUST00000142477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029648	Flt1	ENSMUST00000200895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029648	Flt1	ENSMUST00000110529	ENSMUSP00000106158	TRANSLATION	protein_coding	-	-	1	688	0	12	2.2	106.6	0	0,-3	-	-	0	MINOR
ENSMUSG00000029648	Flt1	ENSMUST00000031652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029123	Stk32b	ENSMUST00000094836	ENSMUSP00000092432	TRANSLATION	protein_coding	-	CCDS39076.1	1	414	18	8.275	7.5	219.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029403	Cdkl2	ENSMUST00000113143	ENSMUSP00000108768	TRANSLATION	protein_coding	-	CCDS19425.1	1	564	17	6.9	0.5	254.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029403	Cdkl2	ENSMUST00000136037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029403	Cdkl2	ENSMUST00000086978	ENSMUSP00000084199	TRANSLATION	protein_coding	-	CCDS19426.1	1	568	17	6.9	1.5	254.8	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000029403	Cdkl2	ENSMUST00000069937	ENSMUSP00000063617	TRANSLATION	protein_coding	-	CCDS19425.1	1	564	17	6.9	0.5	254.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029403	Cdkl2	ENSMUST00000201895	-	NO_TRANSLATION	TEC
ENSMUSG00000029403	Cdkl2	ENSMUST00000201357	ENSMUSP00000143967	TRANSLATION	protein_coding	start	-	2	75	0	1.866	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029403	Cdkl2	ENSMUST00000113140	ENSMUSP00000108765	TRANSLATION	protein_coding	-	CCDS19426.1	5	568	17	6.9	1.5	254.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000028932	Psmc2	ENSMUST00000030769	ENSMUSP00000030769	TRANSLATION	protein_coding	-	-	1	433	14	10.75	21	136.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028932	Psmc2	ENSMUST00000239497	ENSMUSP00000159299	TRANSLATION	protein_coding	-	CCDS19108.1	-	475	14	10.75	0.5	136.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000028932	Psmc2	ENSMUST00000132720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060152	Pop5	ENSMUST00000081497	ENSMUSP00000080215	TRANSLATION	protein_coding	-	CCDS19583.1	5	169	0	0	4.1	88.4	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000060152	Pop5	ENSMUST00000128830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060152	Pop5	ENSMUST00000135455	ENSMUSP00000118408	TRANSLATION	nonsense_mediated_decay	-	-	1	169	0	0	4.1	88.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060152	Pop5	ENSMUST00000142233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060152	Pop5	ENSMUST00000140083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060152	Pop5	ENSMUST00000154800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074817	Papolb	ENSMUST00000099400	ENSMUSP00000100595	TRANSLATION	protein_coding	-	CCDS39362.1	-	642	12	1	5.1	506.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000044017	Adgrd1	ENSMUST00000155590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044017	Adgrd1	ENSMUST00000056617	ENSMUSP00000060307	TRANSLATION	protein_coding	-	CCDS39289.1	1	903	0	3.915	1.5	287.2	7	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000044017	Adgrd1	ENSMUST00000156437	ENSMUSP00000121217	TRANSLATION	protein_coding	-	CCDS84966.1	1	871	0	3.915	1.5	287.2	7	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000039747	Orai2	ENSMUST00000196454	ENSMUSP00000142597	TRANSLATION	protein_coding	-	-	5	264	0	2.28	0.5	238.6	4	-4,-6	-	-	12	MINOR
ENSMUSG00000039747	Orai2	ENSMUST00000197052	ENSMUSP00000143219	TRANSLATION	protein_coding	stop	-	3	158	0	1.8	0	165.3	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000039747	Orai2	ENSMUST00000041048	ENSMUSP00000037137	TRANSLATION	protein_coding	-	CCDS39326.1	1	250	0	2.28	5.3	238.6	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039747	Orai2	ENSMUST00000198268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029462	Vps29	ENSMUST00000118830	ENSMUSP00000113525	TRANSLATION	protein_coding	-	CCDS84954.1	1	186	7	5.16	19.5	0	0	-3,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000029462	Vps29	ENSMUST00000111729	ENSMUSP00000107358	TRANSLATION	nonsense_mediated_decay	-	-	2	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029462	Vps29	ENSMUST00000118765	ENSMUSP00000112579	TRANSLATION	protein_coding	-	-	3	91	4	2.16	1.2	0	0	-4,-6	-	-	3.47	MINOR
ENSMUSG00000029462	Vps29	ENSMUST00000132785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029462	Vps29	ENSMUST00000154686	ENSMUSP00000118991	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029462	Vps29	ENSMUST00000145821	ENSMUSP00000123593	TRANSLATION	protein_coding	stop	-	3	124	6	3.16	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000029462	Vps29	ENSMUST00000199086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029462	Vps29	ENSMUST00000117868	ENSMUSP00000113345	TRANSLATION	protein_coding	-	-	2	144	7	3.91	0	0	0	-4,-6	-	-	9.498	MINOR
ENSMUSG00000029462	Vps29	ENSMUST00000155671	ENSMUSP00000121020	TRANSLATION	protein_coding	-	CCDS39256.1	1	182	7	5.16	19.5	0	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000038582	Pptc7	ENSMUST00000119015	ENSMUSP00000113194	TRANSLATION	protein_coding	-	-	1	207	7	0	0	0	0	-4,-7	-	-	5.25	ALTERNATIVE:2
ENSMUSG00000038582	Pptc7	ENSMUST00000053426	ENSMUSP00000051838	TRANSLATION	protein_coding	-	CCDS39255.1	1	310	8	0	2.8	0	0	-3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000090302	Gm7714	ENSMUST00000169154	ENSMUSP00000132464	TRANSLATION	protein_coding	-	CCDS51536.1	1	131	0	0	0.5	122.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000090015	Gm15446	ENSMUST00000112544	ENSMUSP00000108163	TRANSLATION	protein_coding	-	-	2	553	64	2.2	0	394.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090015	Gm15446	ENSMUST00000170826	ENSMUSP00000127438	TRANSLATION	protein_coding	start	-	5	63	0	1.6	1.5	80	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090015	Gm15446	ENSMUST00000146564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029314	Gpat3	ENSMUST00000112887	ENSMUSP00000108508	TRANSLATION	protein_coding	-	CCDS19470.1	1	438	0	0	1.8	68.4	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029314	Gpat3	ENSMUST00000092990	ENSMUSP00000090667	TRANSLATION	protein_coding	-	CCDS19470.1	1	438	0	0	1.8	68.4	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029314	Gpat3	ENSMUST00000145612	ENSMUSP00000114813	TRANSLATION	protein_coding	stop	-	2	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029314	Gpat3	ENSMUST00000031255	ENSMUSP00000031255	TRANSLATION	protein_coding	-	CCDS19470.1	1	438	0	0	1.8	68.4	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029314	Gpat3	ENSMUST00000144623	ENSMUSP00000124076	TRANSLATION	protein_coding	stop	-	2	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035187	Nkx6-1	ENSMUST00000044125	ENSMUSP00000042716	TRANSLATION	protein_coding	-	CCDS19471.1	1	365	0	1.2	2.7	73.7	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038204	Asb10	ENSMUST00000117900	ENSMUSP00000112743	TRANSLATION	protein_coding	-	CCDS80229.1	5	452	0	2.02	2.7	154.7	0	-4,0	-	-	12.786	MINOR
ENSMUSG00000038204	Asb10	ENSMUST00000119657	ENSMUSP00000113328	TRANSLATION	protein_coding	-	-	5	429	0	1.92	1.2	154.7	0	-4,-5	-	-	11.793	MINOR
ENSMUSG00000038204	Asb10	ENSMUST00000048302	ENSMUSP00000041539	TRANSLATION	protein_coding	-	CCDS19124.1	1	467	0	1.92	7.5	154.7	0	-4,-5	-	-	14.7	PRINCIPAL:1
ENSMUSG00000029414	Kntc1	ENSMUST00000199838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029414	Kntc1	ENSMUST00000197665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029414	Kntc1	ENSMUST00000197002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029414	Kntc1	ENSMUST00000197265	ENSMUSP00000142523	TRANSLATION	nonsense_mediated_decay	start	-	3	110	0	0	0	190.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029414	Kntc1	ENSMUST00000198841	ENSMUSP00000143142	TRANSLATION	protein_coding	start	-	2	106	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029414	Kntc1	ENSMUST00000031366	ENSMUSP00000031366	TRANSLATION	protein_coding	-	CCDS39274.1	1	2207	0	0	0.5	841.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029414	Kntc1	ENSMUST00000198716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000125693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000150861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000147236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000141022	ENSMUSP00000122278	TRANSLATION	nonsense_mediated_decay	start	-	5	15	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029017	Pmpcb	ENSMUST00000152440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000149648	ENSMUSP00000119619	TRANSLATION	protein_coding	stop	-	5	50	0	1	0	60.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029017	Pmpcb	ENSMUST00000137334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029017	Pmpcb	ENSMUST00000030882	ENSMUSP00000030882	TRANSLATION	protein_coding	-	CCDS19106.1	1	489	4	10.58	2.7	316.5	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000095040	1700001J03Rik	ENSMUST00000073721	ENSMUSP00000073399	TRANSLATION	protein_coding	-	CCDS51699.1	1	219	0	0	0.5	31.3	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000095040	1700001J03Rik	ENSMUST00000188052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107283	Mpv17	ENSMUST00000202203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107283	Mpv17	ENSMUST00000201171	ENSMUSP00000144600	TRANSLATION	protein_coding	start	-	3	105	0	0	0	69.2	4	-3,-1	-	-	-1	MINOR
ENSMUSG00000107283	Mpv17	ENSMUST00000154241	ENSMUSP00000115292	TRANSLATION	protein_coding	-	CCDS19175.1	1	176	0	0	8.8	83.7	4	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000107283	Mpv17	ENSMUST00000202241	ENSMUSP00000144119	TRANSLATION	protein_coding	-	CCDS80249.1	3	178	0	0	8.8	77.9	3	-4,-2	-	-	8.586	ALTERNATIVE:1
ENSMUSG00000107283	Mpv17	ENSMUST00000200744	ENSMUSP00000143843	TRANSLATION	protein_coding	-	CCDS80248.1	2	165	0	0	3	50.7	3	-4,-2	-	-	4.404	MINOR
ENSMUSG00000107283	Mpv17	ENSMUST00000201353	ENSMUSP00000144198	TRANSLATION	protein_coding	-	CCDS19175.1	3	176	0	0	8.8	83.7	4	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000107283	Mpv17	ENSMUST00000201491	ENSMUSP00000144593	TRANSLATION	protein_coding	-	-	2	162	0	0	0	56.7	3	-4,-2	-	-	4.062	MINOR
ENSMUSG00000107283	Mpv17	ENSMUST00000200864	ENSMUSP00000144331	TRANSLATION	protein_coding	-	CCDS19175.1	3	176	0	0	8.8	83.7	4	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000107283	Mpv17	ENSMUST00000202614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107283	Mpv17	ENSMUST00000202375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107283	Mpv17	ENSMUST00000200833	ENSMUSP00000144324	TRANSLATION	protein_coding	-	-	5	170	0	0	0	0	2	-4,-2	-	-	0	MINOR
ENSMUSG00000107283	Mpv17	ENSMUST00000202836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058427	Cxcl2	ENSMUST00000200681	ENSMUSP00000144334	TRANSLATION	protein_coding	-	-	1	96	0	1.75	1.5	52.4	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000058427	Cxcl2	ENSMUST00000075433	ENSMUSP00000074885	TRANSLATION	protein_coding	-	CCDS39144.1	1	100	0	1.75	1.5	52.4	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000058427	Cxcl2	ENSMUST00000200919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058427	Cxcl2	ENSMUST00000202317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007207	Stx1a	ENSMUST00000156626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007207	Stx1a	ENSMUST00000133812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007207	Stx1a	ENSMUST00000144198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007207	Stx1a	ENSMUST00000150838	ENSMUSP00000117144	TRANSLATION	nonsense_mediated_decay	-	-	1	256	0	6.33	0	214.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007207	Stx1a	ENSMUST00000005509	ENSMUSP00000005509	TRANSLATION	protein_coding	-	CCDS19731.1	1	288	0	8.08	14.3	295	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000007207	Stx1a	ENSMUST00000201008	ENSMUSP00000144082	TRANSLATION	protein_coding	stop	-	5	158	0	4.58	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067219	Nipal1	ENSMUST00000197837	ENSMUSP00000143667	TRANSLATION	protein_coding	stop	-	5	130	0	0	0	193.7	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000067219	Nipal1	ENSMUST00000197772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067219	Nipal1	ENSMUST00000087212	ENSMUSP00000084462	TRANSLATION	protein_coding	-	CCDS39111.1	1	416	0	0	1.5	442.5	9	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029725	Ppp1r35	ENSMUST00000152298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029725	Ppp1r35	ENSMUST00000126126	ENSMUSP00000114480	TRANSLATION	protein_coding	start/stop	-	5	144	0	0	0	98.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029725	Ppp1r35	ENSMUST00000031739	ENSMUSP00000031739	TRANSLATION	protein_coding	-	CCDS19777.1	1	260	0	0	1.5	152.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029725	Ppp1r35	ENSMUST00000198929	ENSMUSP00000143182	TRANSLATION	protein_coding	start	-	3	101	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012428	Steap4	ENSMUST00000115421	ENSMUSP00000111081	TRANSLATION	protein_coding	-	CCDS39008.1	1	470	20	1.6	3.9	97.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037210	Fam193a	ENSMUST00000181379	ENSMUSP00000137979	TRANSLATION	protein_coding	start	-	1	134	0	0	0	46.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037210	Fam193a	ENSMUST00000202503	ENSMUSP00000143922	TRANSLATION	protein_coding	start/stop	-	3	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037210	Fam193a	ENSMUST00000201005	ENSMUSP00000143885	TRANSLATION	protein_coding	start/stop	-	5	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037210	Fam193a	ENSMUST00000180376	ENSMUSP00000138082	TRANSLATION	protein_coding	-	-	5	1517	0	0	0.5	103.4	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000037210	Fam193a	ENSMUST00000094867	ENSMUSP00000092463	TRANSLATION	protein_coding	-	-	5	1231	0	0	0	103.4	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000035946	Gsx2	ENSMUST00000160104	ENSMUSP00000123712	TRANSLATION	protein_coding	-	-	1	134	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000035946	Gsx2	ENSMUST00000040477	ENSMUSP00000036625	TRANSLATION	protein_coding	-	CCDS19350.1	1	305	0	1.2	3.9	76.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000066682	Pilrb2	ENSMUST00000199247	ENSMUSP00000142830	TRANSLATION	protein_coding	start	-	5	96	0	1.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066682	Pilrb2	ENSMUST00000196162	ENSMUSP00000143064	TRANSLATION	protein_coding	-	-	1	224	0	2.55	0.5	0	2	0,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000066682	Pilrb2	ENSMUST00000197411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066682	Pilrb2	ENSMUST00000198024	ENSMUSP00000143366	TRANSLATION	nonsense_mediated_decay	start	-	5	29	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000066682	Pilrb2	ENSMUST00000164886	ENSMUSP00000131233	TRANSLATION	protein_coding	-	CCDS51676.1	1	225	0	2.55	0.5	0	2	0,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000066682	Pilrb2	ENSMUST00000199773	ENSMUSP00000142492	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000029387	Gtf2h3	ENSMUST00000143810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029387	Gtf2h3	ENSMUST00000126466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029387	Gtf2h3	ENSMUST00000031333	ENSMUSP00000031333	TRANSLATION	protein_coding	-	CCDS19680.1	1	309	4	8.41	3.9	349.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000029387	Gtf2h3	ENSMUST00000142746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029387	Gtf2h3	ENSMUST00000153436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029387	Gtf2h3	ENSMUST00000200670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023452	Pisd	ENSMUST00000202283	ENSMUSP00000144616	TRANSLATION	nonsense_mediated_decay	-	-	5	153	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000061895	ENSMUSP00000051438	TRANSLATION	protein_coding	-	CCDS19194.1	1	406	0	0	1.5	229.6	0	-4,0	-	-	6.231	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000142957	ENSMUSP00000119621	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000201314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023452	Pisd	ENSMUST00000138360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023452	Pisd	ENSMUST00000120591	ENSMUSP00000112573	TRANSLATION	protein_coding	-	CCDS84866.1	5	375	0	0	7.5	229.6	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000023452	Pisd	ENSMUST00000200390	ENSMUSP00000142818	TRANSLATION	nonsense_mediated_decay	-	-	5	153	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000142779	ENSMUSP00000122705	TRANSLATION	protein_coding	start	-	5	359	0	0	0	163.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000197787	ENSMUSP00000143277	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000202641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023452	Pisd	ENSMUST00000135248	ENSMUSP00000120201	TRANSLATION	protein_coding	stop	-	2	151	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000201980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023452	Pisd	ENSMUST00000071829	ENSMUSP00000071732	TRANSLATION	protein_coding	-	-	5	262	0	0	0	110.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000023452	Pisd	ENSMUST00000145759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058153	Sez6l	ENSMUST00000212480	ENSMUSP00000148791	TRANSLATION	protein_coding	-	-	5	964	3	5.978	1.5	307.1	2	0,-2	-	-	14.4	ALTERNATIVE:2
ENSMUSG00000058153	Sez6l	ENSMUST00000075387	ENSMUSP00000074847	TRANSLATION	protein_coding	-	CCDS51617.1	1	962	3	5.978	0.5	307.1	2	0,-2	-	-	14.4	PRINCIPAL:3
ENSMUSG00000058153	Sez6l	ENSMUST00000212758	ENSMUSP00000148806	TRANSLATION	protein_coding	-	-	5	887	3	5.28	0	277	2	0,-2	-	-	11.196	MINOR
ENSMUSG00000058153	Sez6l	ENSMUST00000079491	ENSMUSP00000078454	TRANSLATION	protein_coding	-	CCDS57373.1	1	963	3	6.278	1.5	307.1	2	0,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000058153	Sez6l	ENSMUST00000197425	ENSMUSP00000143395	TRANSLATION	protein_coding	-	CCDS80369.1	1	897	3	5.178	0.5	277	2	0,-2	-	-	10.992	MINOR
ENSMUSG00000058153	Sez6l	ENSMUST00000200575	ENSMUSP00000143160	TRANSLATION	protein_coding	start	-	1	714	3	5.638	0	275.2	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063531	Sema3e	ENSMUST00000130116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063531	Sema3e	ENSMUST00000199698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063531	Sema3e	ENSMUST00000073957	ENSMUSP00000073612	TRANSLATION	protein_coding	-	CCDS19093.1	1	775	0	12.68	5.1	522.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000029439	Sfswap	ENSMUST00000200662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000198836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029439	Sfswap	ENSMUST00000199925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029439	Sfswap	ENSMUST00000053737	ENSMUSP00000062413	TRANSLATION	protein_coding	-	CCDS19694.1	5	945	0	4	1.5	212.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029439	Sfswap	ENSMUST00000198423	-	NO_TRANSLATION	TEC
ENSMUSG00000029439	Sfswap	ENSMUST00000200500	ENSMUSP00000143351	TRANSLATION	nonsense_mediated_decay	start	-	3	82	0	0	0	0	0	1,1	-	-	-1	MINOR
ENSMUSG00000029439	Sfswap	ENSMUST00000199215	ENSMUSP00000143640	TRANSLATION	nonsense_mediated_decay	start	-	5	69	0	1.25	0	21.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029439	Sfswap	ENSMUST00000195961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000196698	ENSMUSP00000142464	TRANSLATION	nonsense_mediated_decay	-	-	5	121	0	0	0	92.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029439	Sfswap	ENSMUST00000198266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000196147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000199692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000199887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000196873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029439	Sfswap	ENSMUST00000199394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029570	Lfng	ENSMUST00000200626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029570	Lfng	ENSMUST00000199848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029570	Lfng	ENSMUST00000031555	ENSMUSP00000031555	TRANSLATION	protein_coding	-	CCDS19821.1	1	378	10	5.95	6.3	401.7	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000029602	Rasal1	ENSMUST00000031606	ENSMUSP00000031606	TRANSLATION	protein_coding	-	CCDS19623.1	1	799	21	11.44	1.5	383	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029602	Rasal1	ENSMUST00000125804	ENSMUSP00000119913	TRANSLATION	protein_coding	stop	-	2	73	3	2.15	0	55.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029602	Rasal1	ENSMUST00000148695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029602	Rasal1	ENSMUST00000156722	ENSMUSP00000123266	TRANSLATION	protein_coding	-	CCDS19623.1	1	799	21	11.44	1.5	383	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029602	Rasal1	ENSMUST00000154759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000136104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000147226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000120445	ENSMUSP00000113249	TRANSLATION	protein_coding	-	-	5	1351	0	13.378	3.4	1071.1	10	3,-1	-	-	7	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000149280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000200930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000127046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000117407	ENSMUSP00000112388	TRANSLATION	protein_coding	-	-	5	1342	0	13.18	2.7	1075.5	10	3,-1	-	-	6.312	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000124117	ENSMUSP00000118882	TRANSLATION	protein_coding	start	-	5	873	0	6.7	0	864.7	10	-4,-6	-	-	-1	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000132634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037605	Adgrl3	ENSMUST00000134597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037605	Adgrl3	ENSMUST00000118034	ENSMUSP00000113534	TRANSLATION	protein_coding	-	-	5	1503	0	13.18	2	1380.4	10	4,-1	-	-	12.02	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000118078	ENSMUSP00000112731	TRANSLATION	protein_coding	-	-	5	1231	0	13.18	3	980.5	10	4,-1	-	-	6.438	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000118442	ENSMUSP00000113836	TRANSLATION	protein_coding	-	CCDS84891.1	5	1308	0	13.378	5.1	976.1	10	3,-1	-	-	7.708	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000036068	ENSMUSP00000045342	TRANSLATION	protein_coding	-	-	5	1543	0	13.378	5.1	1263.2	10	3,-1	-	-	7.708	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000120128	ENSMUSP00000113208	TRANSLATION	protein_coding	-	-	5	1240	0	13.378	4.4	976.1	10	4,-1	-	-	7.416	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000120673	ENSMUSP00000113482	TRANSLATION	protein_coding	-	-	5	1580	0	13.378	5.8	1376	10	3,-1	-	-	13.736	PRINCIPAL:1
ENSMUSG00000037605	Adgrl3	ENSMUST00000119385	ENSMUSP00000113243	TRANSLATION	protein_coding	-	CCDS84893.1	5	1299	0	13.18	3.9	980.5	10	3,-1	-	-	6.812	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000153264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037605	Adgrl3	ENSMUST00000201055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000117985	ENSMUSP00000113950	TRANSLATION	protein_coding	-	-	5	1512	0	13.378	2	1376	10	4,-1	-	-	12.152	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000132375	ENSMUSP00000117211	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000117253	ENSMUSP00000112470	TRANSLATION	protein_coding	-	-	1	1268	0	13.18	0	1061.4	10	4,-1	-	-	5.604	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000148923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000120144	ENSMUSP00000113619	TRANSLATION	protein_coding	-	-	5	1274	0	13.18	3	1075.5	10	4,-1	-	-	6.438	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000201803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000122037	ENSMUSP00000113374	TRANSLATION	protein_coding	-	CCDS84895.1	5	1460	0	13.18	1.5	1267.2	10	4,-1	-	-	5.812	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000140356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037605	Adgrl3	ENSMUST00000148830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037605	Adgrl3	ENSMUST00000126227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037605	Adgrl3	ENSMUST00000119788	ENSMUSP00000114067	TRANSLATION	protein_coding	-	-	5	1550	0	13.378	1	1264.6	10	3,-1	-	-	6	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000121707	ENSMUSP00000112823	TRANSLATION	protein_coding	-	-	5	1534	0	13.18	1.2	1267.6	10	3,-1	-	-	5.688	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000122356	ENSMUSP00000113600	TRANSLATION	protein_coding	-	CCDS84894.1	5	1528	0	13.18	5.1	1267.2	10	3,-1	-	-	7.312	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000121641	ENSMUSP00000113694	TRANSLATION	protein_coding	-	-	5	1571	0	13.18	2.2	1380.4	10	3,-1	-	-	12.104	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000072521	ENSMUSP00000072336	TRANSLATION	protein_coding	-	CCDS39122.1	5	1543	0	13.378	5.1	1263.2	10	3,-1	-	-	7.708	MINOR
ENSMUSG00000037605	Adgrl3	ENSMUST00000120292	ENSMUSP00000112548	TRANSLATION	protein_coding	-	-	5	1283	0	13.378	2	1071.1	10	4,-1	-	-	6.416	MINOR
ENSMUSG00000096344	Gm6408	ENSMUST00000179032	ENSMUSP00000136735	TRANSLATION	protein_coding	-	CCDS85001.1	5	320	0	0	0.5	29.4	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000037355	Uvssa	ENSMUST00000087864	ENSMUSP00000085170	TRANSLATION	protein_coding	-	CCDS39064.1	1	717	6	0	1.5	135.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037355	Uvssa	ENSMUST00000202046	ENSMUSP00000144025	TRANSLATION	nonsense_mediated_decay	-	-	1	532	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037355	Uvssa	ENSMUST00000202816	ENSMUSP00000144400	TRANSLATION	protein_coding	-	CCDS39064.1	1	717	6	0	1.5	135.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037355	Uvssa	ENSMUST00000200682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029466	Anapc7	ENSMUST00000148266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029466	Anapc7	ENSMUST00000197993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029466	Anapc7	ENSMUST00000154074	ENSMUSP00000123365	TRANSLATION	protein_coding	start	-	3	58	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029466	Anapc7	ENSMUST00000119792	ENSMUSP00000112658	TRANSLATION	protein_coding	-	-	1	503	0	10.5	0	33.5	0	-4,-6	-	-	9.966	MINOR
ENSMUSG00000029466	Anapc7	ENSMUST00000031422	ENSMUSP00000031422	TRANSLATION	protein_coding	-	CCDS19649.1	1	565	0	11.5	16.7	33.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000029466	Anapc7	ENSMUST00000122010	ENSMUSP00000113928	TRANSLATION	protein_coding	-	CCDS19649.1	5	565	0	11.5	16.7	33.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000029165	Agbl5	ENSMUST00000200990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000201917	ENSMUSP00000144188	TRANSLATION	protein_coding	-	-	1	817	6	1.84	3.6	42.7	0	-4,-6	-	-	19.21	ALTERNATIVE:2
ENSMUSG00000029165	Agbl5	ENSMUST00000202565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000201014	ENSMUSP00000144343	TRANSLATION	protein_coding	start	-	5	137	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000201817	ENSMUSP00000144304	TRANSLATION	nonsense_mediated_decay	-	-	1	808	6	1.84	0	42.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000201167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000201901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000201168	ENSMUSP00000143808	TRANSLATION	protein_coding	-	-	5	886	6	1.84	5.3	42.7	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000029165	Agbl5	ENSMUST00000114700	ENSMUSP00000110348	TRANSLATION	protein_coding	-	CCDS39048.1	1	846	6	1.84	0.5	42.7	0	-4,-6	-	-	18	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000200695	ENSMUSP00000144109	TRANSLATION	protein_coding	stop	-	3	178	0	0.46	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000202060	ENSMUSP00000144018	TRANSLATION	protein_coding	-	CCDS80242.1	1	770	6	1.84	0.5	42.7	0	-4,-6	-	-	18	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000201523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029165	Agbl5	ENSMUST00000202757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000201225	ENSMUSP00000143934	TRANSLATION	protein_coding	-	CCDS80242.1	1	770	6	1.84	0.5	42.7	0	-4,-6	-	-	18	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000201918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029165	Agbl5	ENSMUST00000069705	ENSMUSP00000063228	TRANSLATION	protein_coding	-	CCDS19165.1	1	719	6	1.84	5.3	42.7	0	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000029165	Agbl5	ENSMUST00000200850	ENSMUSP00000144274	TRANSLATION	protein_coding	stop	-	5	231	0	0.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029165	Agbl5	ENSMUST00000202109	ENSMUSP00000144441	TRANSLATION	protein_coding	start/stop	-	5	256	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000176856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029647	Pan3	ENSMUST00000176753	ENSMUSP00000134989	TRANSLATION	protein_coding	start	-	5	688	10	9.811	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000176202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000176817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029647	Pan3	ENSMUST00000201799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000176357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029647	Pan3	ENSMUST00000176596	ENSMUSP00000135477	TRANSLATION	nonsense_mediated_decay	start	-	1	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000176553	ENSMUSP00000134911	TRANSLATION	protein_coding	start	-	3	205	0	3.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000175807	ENSMUSP00000135729	TRANSLATION	protein_coding	start	-	5	458	9	8.811	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000177327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000201248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000176505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000202732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000176806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000177496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000200885	ENSMUSP00000144495	TRANSLATION	protein_coding	start/stop	-	3	156	2	1.62	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000177328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000177465	ENSMUSP00000134810	TRANSLATION	nonsense_mediated_decay	start	-	5	210	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029647	Pan3	ENSMUST00000202559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029647	Pan3	ENSMUST00000031651	ENSMUSP00000031651	TRANSLATION	protein_coding	-	CCDS39401.2	5	837	10	9.811	0.5	0	0	-1,1	-	-	12	PRINCIPAL:2
ENSMUSG00000029647	Pan3	ENSMUST00000176600	ENSMUSP00000135367	TRANSLATION	protein_coding	-	-	5	887	10	9.811	0.5	0	0	-1,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000029647	Pan3	ENSMUST00000202884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029647	Pan3	ENSMUST00000176466	ENSMUSP00000135673	TRANSLATION	nonsense_mediated_decay	start	-	5	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028995	Fam126a	ENSMUST00000101513	ENSMUSP00000099050	TRANSLATION	protein_coding	-	CCDS80221.1	1	370	0	8.75	1.5	425.6	0	-4,-5	-	-	12.231	MINOR
ENSMUSG00000028995	Fam126a	ENSMUST00000147179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028995	Fam126a	ENSMUST00000126828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028995	Fam126a	ENSMUST00000198867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028995	Fam126a	ENSMUST00000115109	ENSMUSP00000110761	TRANSLATION	protein_coding	-	-	5	420	0	8.75	1.5	425.6	0	-4,-5	-	-	12.231	MINOR
ENSMUSG00000028995	Fam126a	ENSMUST00000197617	ENSMUSP00000143784	TRANSLATION	protein_coding	-	-	5	338	0	6.25	0	331.8	0	-4,-6	-	-	1.374	MINOR
ENSMUSG00000028995	Fam126a	ENSMUST00000030849	ENSMUSP00000030849	TRANSLATION	protein_coding	-	CCDS19113.1	1	521	0	8.75	7.5	425.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029592	Usp30	ENSMUST00000200119	ENSMUSP00000142350	TRANSLATION	protein_coding	stop	-	5	410	4	3.92	0	88.3	3	-4,0	-	-	-1	MINOR
ENSMUSG00000029592	Usp30	ENSMUST00000031588	ENSMUSP00000031588	TRANSLATION	protein_coding	-	CCDS19558.1	1	517	4	4.36	3.9	139.7	3	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000029592	Usp30	ENSMUST00000198457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029592	Usp30	ENSMUST00000196574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029592	Usp30	ENSMUST00000202603	ENSMUSP00000144522	TRANSLATION	protein_coding	stop	-	5	144	0	1.36	0	39.8	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000029592	Usp30	ENSMUST00000162506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029592	Usp30	ENSMUST00000160164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029205	Chrna9	ENSMUST00000201664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029205	Chrna9	ENSMUST00000031108	ENSMUSP00000031108	TRANSLATION	protein_coding	-	CCDS39101.1	1	479	0	5.43	3.9	396	4	-2,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000029205	Chrna9	ENSMUST00000202957	ENSMUSP00000144147	TRANSLATION	protein_coding	stop	-	3	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029205	Chrna9	ENSMUST00000200881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029205	Chrna9	ENSMUST00000201814	ENSMUSP00000144364	TRANSLATION	protein_coding	stop	-	3	258	0	3.6	0	229	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000029205	Chrna9	ENSMUST00000202234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029205	Chrna9	ENSMUST00000202735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091624	Vmn2r9	ENSMUST00000233547	ENSMUSP00000156745	TRANSLATION	nonsense_mediated_decay	-	-	-	827	4	2.94	0	342.5	9	1,-3	-	-	-1	MINOR
ENSMUSG00000091624	Vmn2r9	ENSMUST00000233198	ENSMUSP00000156678	TRANSLATION	nonsense_mediated_decay	-	-	-	848	4	3.24	0.5	357.8	9	1,-3	-	-	-1	MINOR
ENSMUSG00000091624	Vmn2r9	ENSMUST00000170419	ENSMUSP00000129520	TRANSLATION	protein_coding	-	CCDS51595.1	5	848	4	3.24	0.5	357.8	9	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000091624	Vmn2r9	ENSMUST00000233835	ENSMUSP00000156817	TRANSLATION	protein_coding	-	-	-	827	4	2.94	0	342.5	9	1,-3	-	-	14.482	MINOR
ENSMUSG00000011034	Slc5a1	ENSMUST00000011178	ENSMUSP00000011178	TRANSLATION	protein_coding	-	CCDS19199.1	1	665	0	7.68	6.3	572.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053647	Gper1	ENSMUST00000173364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053647	Gper1	ENSMUST00000066211	ENSMUSP00000080370	TRANSLATION	protein_coding	-	CCDS19811.1	1	375	0	0.48	3.9	131	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000029372	Ppbp	ENSMUST00000031319	ENSMUSP00000031319	TRANSLATION	protein_coding	-	CCDS19415.1	1	113	0	1.75	0.5	37.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070473	Cldn3	ENSMUST00000094245	ENSMUSP00000091799	TRANSLATION	protein_coding	-	CCDS19729.1	-	219	0	1	9.6	115.1	0	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000067285	Gm16223	ENSMUST00000087332	ENSMUSP00000084590	TRANSLATION	protein_coding	start	-	1	117	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000062761	Zfp512	ENSMUST00000202061	ENSMUSP00000143978	TRANSLATION	protein_coding	stop	-	2	72	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062761	Zfp512	ENSMUST00000201599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062761	Zfp512	ENSMUST00000200782	ENSMUSP00000143874	TRANSLATION	protein_coding	start/stop	-	3	222	16	2.53	0	20.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062761	Zfp512	ENSMUST00000201945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062761	Zfp512	ENSMUST00000076264	ENSMUSP00000075613	TRANSLATION	protein_coding	-	CCDS19183.1	1	562	20	2.53	1.5	21.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000062761	Zfp512	ENSMUST00000201450	ENSMUSP00000144433	TRANSLATION	protein_coding	stop	-	5	226	12	0.882	0	20.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062761	Zfp512	ENSMUST00000202244	ENSMUSP00000143860	TRANSLATION	protein_coding	-	-	1	506	13	2.53	0	0	0	-4,-2	-	-	7.332	MINOR
ENSMUSG00000062761	Zfp512	ENSMUST00000201859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073117	Gm7347	ENSMUST00000095004	ENSMUSP00000092613	TRANSLATION	protein_coding	-	-	1	267	0	0	0.5	83.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000028969	Cdk5	ENSMUST00000030814	ENSMUSP00000030814	TRANSLATION	protein_coding	-	CCDS51434.1	1	292	17	9	14.3	250.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028969	Cdk5	ENSMUST00000198990	ENSMUSP00000142413	TRANSLATION	protein_coding	-	-	5	260	15	8	2.4	179.7	0	-4,-5	-	-	10.842	MINOR
ENSMUSG00000028969	Cdk5	ENSMUST00000197619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029605	Oas1b	ENSMUST00000182725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029605	Oas1b	ENSMUST00000183291	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000029605	Oas1b	ENSMUST00000086377	ENSMUSP00000083564	TRANSLATION	protein_coding	-	-	5	251	5	4.3	0	136.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000075599	Smok3a	ENSMUST00000085886	ENSMUSP00000083049	TRANSLATION	protein_coding	-	CCDS51678.1	1	504	17	0.6	0.5	243.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075599	Smok3a	ENSMUST00000171498	ENSMUSP00000125938	TRANSLATION	protein_coding	-	CCDS51678.1	1	504	17	0.6	0.5	243.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005378	Bud23	ENSMUST00000141309	ENSMUSP00000119659	TRANSLATION	protein_coding	stop	-	5	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000085984	ENSMUSP00000083146	TRANSLATION	protein_coding	-	CCDS19732.2	1	281	18	5.378	1.5	152	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000005378	Bud23	ENSMUST00000149108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005378	Bud23	ENSMUST00000071677	ENSMUSP00000071600	TRANSLATION	protein_coding	-	-	1	259	18	4.416	0	152	0	-4,-6	-	-	16.074	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000202478	ENSMUSP00000144612	TRANSLATION	nonsense_mediated_decay	start	-	3	81	0	1.28	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000144891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005378	Bud23	ENSMUST00000129013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005378	Bud23	ENSMUST00000201554	ENSMUSP00000144677	TRANSLATION	protein_coding	stop	-	5	13	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000141765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005378	Bud23	ENSMUST00000147756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005378	Bud23	ENSMUST00000111205	ENSMUSP00000106836	TRANSLATION	protein_coding	-	-	3	246	18	4.978	0	139.5	0	-4,-7	-	-	16.452	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000129691	ENSMUSP00000120383	TRANSLATION	protein_coding	start	-	5	139	0	1.15	0	54	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000148549	ENSMUSP00000118370	TRANSLATION	protein_coding	stop	-	5	92	15	1.95	0	39	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005378	Bud23	ENSMUST00000151551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005378	Bud23	ENSMUST00000134180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029599	Ddx54	ENSMUST00000202672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029599	Ddx54	ENSMUST00000201698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029599	Ddx54	ENSMUST00000031598	ENSMUSP00000031598	TRANSLATION	protein_coding	-	CCDS39241.1	1	874	14	7.87	1.5	306.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029599	Ddx54	ENSMUST00000201616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039886	Tmem120a	ENSMUST00000141779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039886	Tmem120a	ENSMUST00000127156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039886	Tmem120a	ENSMUST00000153399	ENSMUSP00000120834	TRANSLATION	protein_coding	stop	-	5	92	0	0	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039886	Tmem120a	ENSMUST00000043378	ENSMUSP00000045252	TRANSLATION	protein_coding	-	CCDS19744.1	1	343	0	0	6.3	519.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000039886	Tmem120a	ENSMUST00000199952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035505	Cox18	ENSMUST00000048363	ENSMUSP00000044144	TRANSLATION	protein_coding	-	CCDS19411.1	1	331	0	1.66	3.9	0	4	-1,3	-	-	7	PRINCIPAL:3
ENSMUSG00000035505	Cox18	ENSMUST00000133905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035505	Cox18	ENSMUST00000131068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035505	Cox18	ENSMUST00000144898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035505	Cox18	ENSMUST00000200475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035505	Cox18	ENSMUST00000118816	ENSMUSP00000113353	TRANSLATION	protein_coding	-	CCDS51543.1	1	332	0	1.6	3.9	0	4	-1,3	-	-	6.784	ALTERNATIVE:2
ENSMUSG00000035505	Cox18	ENSMUST00000148480	ENSMUSP00000116430	TRANSLATION	nonsense_mediated_decay	-	-	2	124	0	0.2	0	0	0	-1,3	-	-	-1	MINOR
ENSMUSG00000028954	Nub1	ENSMUST00000200337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028954	Nub1	ENSMUST00000068825	ENSMUSP00000070265	TRANSLATION	protein_coding	-	CCDS39030.1	1	614	0	4.95	6.3	86.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000028954	Nub1	ENSMUST00000197407	ENSMUSP00000143657	TRANSLATION	protein_coding	-	CCDS80230.1	1	638	0	4.95	2.9	86.5	0	-4,0	-	-	12.716	MINOR
ENSMUSG00000029614	Rpl6	ENSMUST00000201155	ENSMUSP00000143981	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.25	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029614	Rpl6	ENSMUST00000140515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029614	Rpl6	ENSMUST00000031617	ENSMUSP00000031617	TRANSLATION	protein_coding	-	CCDS19632.1	1	296	0	3.924	1.5	261.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029614	Rpl6	ENSMUST00000139177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029614	Rpl6	ENSMUST00000197044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029614	Rpl6	ENSMUST00000138621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029614	Rpl6	ENSMUST00000146579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029614	Rpl6	ENSMUST00000124330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067149	Jchain	ENSMUST00000164073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067149	Jchain	ENSMUST00000087033	ENSMUSP00000084259	TRANSLATION	protein_coding	-	CCDS19401.1	1	159	0	0	4.1	243.7	0	2,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000029454	Mapkapk5	ENSMUST00000152270	ENSMUSP00000116464	TRANSLATION	protein_coding	start	-	3	114	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029454	Mapkapk5	ENSMUST00000031410	ENSMUSP00000031410	TRANSLATION	protein_coding	-	CCDS39248.1	1	473	22	8.249	14.8	209.4	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000029454	Mapkapk5	ENSMUST00000196315	ENSMUSP00000142346	TRANSLATION	protein_coding	stop	-	3	187	19	3.985	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029454	Mapkapk5	ENSMUST00000153763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029454	Mapkapk5	ENSMUST00000111786	ENSMUSP00000107416	TRANSLATION	protein_coding	-	-	1	324	1	4.574	0	90.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029454	Mapkapk5	ENSMUST00000126524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029454	Mapkapk5	ENSMUST00000154628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029454	Mapkapk5	ENSMUST00000128782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029454	Mapkapk5	ENSMUST00000131914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029454	Mapkapk5	ENSMUST00000111783	ENSMUSP00000107413	TRANSLATION	protein_coding	-	-	1	471	22	8.249	14.8	209.4	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000029454	Mapkapk5	ENSMUST00000111781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029454	Mapkapk5	ENSMUST00000151352	ENSMUSP00000143489	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000029454	Mapkapk5	ENSMUST00000111782	ENSMUSP00000107412	TRANSLATION	protein_coding	-	-	1	322	1	4.574	0	90.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000070697	Utp3	ENSMUST00000090413	ENSMUSP00000087896	TRANSLATION	protein_coding	-	CCDS19402.1	-	469	0	0	1.5	160.7	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000036553	Sh3tc1	ENSMUST00000151555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036553	Sh3tc1	ENSMUST00000127825	ENSMUSP00000115376	TRANSLATION	protein_coding	start	-	1	1147	0	1.94	0	45.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036553	Sh3tc1	ENSMUST00000201511	ENSMUSP00000144175	TRANSLATION	protein_coding	-	CCDS19234.2	1	1346	0	3.34	1.5	57.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036553	Sh3tc1	ENSMUST00000154118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036553	Sh3tc1	ENSMUST00000129664	ENSMUSP00000119811	TRANSLATION	nonsense_mediated_decay	start	-	1	130	0	0	0	29.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036553	Sh3tc1	ENSMUST00000070203	ENSMUSP00000070610	TRANSLATION	protein_coding	-	CCDS19234.2	1	1346	0	3.34	1.5	57.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036553	Sh3tc1	ENSMUST00000127288	ENSMUSP00000123034	TRANSLATION	nonsense_mediated_decay	start	-	2	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045502	Hcar2	ENSMUST00000057145	ENSMUSP00000054104	TRANSLATION	protein_coding	-	CCDS19668.1	-	360	0	0.48	1.5	111	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053334	Ficd	ENSMUST00000065698	ENSMUSP00000071719	TRANSLATION	protein_coding	-	CCDS51620.1	1	458	8	1	7.5	0	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000029260	Ugt2b34	ENSMUST00000031181	ENSMUSP00000031181	TRANSLATION	protein_coding	-	CCDS19381.1	1	532	15	3.4	1.5	833.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029260	Ugt2b34	ENSMUST00000113333	ENSMUSP00000108959	TRANSLATION	protein_coding	-	-	1	440	15	3.2	0	635.6	0	2,-2	-	-	11.598	MINOR
ENSMUSG00000054280	Prr14l	ENSMUST00000120129	ENSMUSP00000113259	TRANSLATION	protein_coding	-	CCDS19195.2	5	1971	0	0	0.5	84.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054280	Prr14l	ENSMUST00000155392	ENSMUSP00000119569	TRANSLATION	nonsense_mediated_decay	start	-	5	661	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054280	Prr14l	ENSMUST00000147752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054280	Prr14l	ENSMUST00000130134	ENSMUSP00000135589	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050553	Gk2	ENSMUST00000059657	ENSMUSP00000052226	TRANSLATION	protein_coding	-	CCDS19454.1	-	554	11	1	7.6	486.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000043940	Wdfy3	ENSMUST00000174598	ENSMUSP00000134244	TRANSLATION	protein_coding	-	-	5	3526	8	10.605	6.5	578.7	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000043940	Wdfy3	ENSMUST00000053177	ENSMUSP00000052607	TRANSLATION	protein_coding	-	CCDS19473.1	1	3508	8	10.605	5.1	578.7	0	-4,-6	-	-	19.49	PRINCIPAL:2
ENSMUSG00000043940	Wdfy3	ENSMUST00000212024	ENSMUSP00000148521	TRANSLATION	protein_coding	-	-	5	3512	8	10.605	1.7	578.7	0	-4,-6	-	-	18.254	MINOR
ENSMUSG00000043940	Wdfy3	ENSMUST00000174698	ENSMUSP00000134541	TRANSLATION	protein_coding	-	-	1	913	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000043940	Wdfy3	ENSMUST00000172512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043940	Wdfy3	ENSMUST00000172927	ENSMUSP00000133979	TRANSLATION	nonsense_mediated_decay	start	-	5	124	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043940	Wdfy3	ENSMUST00000173955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045438	Cox19	ENSMUST00000152715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045438	Cox19	ENSMUST00000049630	ENSMUSP00000062046	TRANSLATION	protein_coding	-	CCDS39350.1	1	92	0	0	7.1	28.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000045438	Cox19	ENSMUST00000198966	ENSMUSP00000143206	TRANSLATION	protein_coding	-	-	3	69	0	0	0	28.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000045438	Cox19	ENSMUST00000197520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045438	Cox19	ENSMUST00000148000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045438	Cox19	ENSMUST00000145125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045438	Cox19	ENSMUST00000133951	ENSMUSP00000138476	TRANSLATION	nonsense_mediated_decay	start	-	3	63	0	0	0	28.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040751	Lat2	ENSMUST00000200998	ENSMUSP00000143977	TRANSLATION	protein_coding	-	CCDS39312.1	1	203	0	0	0.5	261.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000040751	Lat2	ENSMUST00000036362	ENSMUSP00000046900	TRANSLATION	protein_coding	-	CCDS39312.1	1	203	0	0	0.5	261.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000040751	Lat2	ENSMUST00000201832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040751	Lat2	ENSMUST00000201632	ENSMUSP00000144457	TRANSLATION	protein_coding	start	-	5	101	0	0	0	152.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040751	Lat2	ENSMUST00000200737	ENSMUSP00000143998	TRANSLATION	nonsense_mediated_decay	-	-	5	119	0	0	0	77.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000040751	Lat2	ENSMUST00000200945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040751	Lat2	ENSMUST00000077636	ENSMUSP00000076824	TRANSLATION	protein_coding	-	CCDS39311.1	1	191	0	0	0.5	213.6	0	2,-3	-	-	3.108	MINOR
ENSMUSG00000040751	Lat2	ENSMUST00000202461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040751	Lat2	ENSMUST00000202746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040751	Lat2	ENSMUST00000202085	ENSMUSP00000144611	TRANSLATION	protein_coding	stop	-	3	115	0	0	0	98.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000029608	Rph3a	ENSMUST00000202326	ENSMUSP00000144291	TRANSLATION	protein_coding	-	CCDS39246.1	1	681	15	12.25	1.5	287.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029608	Rph3a	ENSMUST00000202406	ENSMUSP00000143917	TRANSLATION	protein_coding	-	CCDS39246.1	1	681	15	12.25	1.5	287.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029608	Rph3a	ENSMUST00000200792	ENSMUSP00000144437	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029608	Rph3a	ENSMUST00000079204	ENSMUSP00000078198	TRANSLATION	protein_coding	-	CCDS39246.1	1	681	15	12.25	1.5	287.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047843	Bri3	ENSMUST00000155491	ENSMUSP00000122016	TRANSLATION	nonsense_mediated_decay	-	-	1	100	2	0	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047843	Bri3	ENSMUST00000056578	ENSMUSP00000057263	TRANSLATION	protein_coding	-	CCDS19848.1	1	125	3	0	7.5	119.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047843	Bri3	ENSMUST00000110695	ENSMUSP00000106323	TRANSLATION	protein_coding	-	CCDS51694.1	2	121	4	0	0.5	114.5	0	-3,-6	-	-	9.688	MINOR
ENSMUSG00000038384	Setd1b	ENSMUST00000056053	ENSMUSP00000134686	TRANSLATION	protein_coding	-	CCDS59684.1	5	1985	18	5	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000038384	Setd1b	ENSMUST00000163030	ENSMUSP00000133933	TRANSLATION	protein_coding	-	CCDS59684.1	5	1985	18	5	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000038384	Setd1b	ENSMUST00000162839	ENSMUSP00000134353	TRANSLATION	protein_coding	start	-	2	87	11	2	0	32.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038384	Setd1b	ENSMUST00000100731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038384	Setd1b	ENSMUST00000173221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038384	Setd1b	ENSMUST00000174836	ENSMUSP00000134461	TRANSLATION	protein_coding	-	-	5	1944	18	5	0	198.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039754	Alkbh4	ENSMUST00000136634	ENSMUSP00000119887	TRANSLATION	protein_coding	stop	-	1	131	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039754	Alkbh4	ENSMUST00000100568	ENSMUSP00000098134	TRANSLATION	protein_coding	-	CCDS19753.1	1	215	14	0.4	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039754	Alkbh4	ENSMUST00000125923	ENSMUSP00000117167	TRANSLATION	nonsense_mediated_decay	-	-	2	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039754	Alkbh4	ENSMUST00000143229	ENSMUSP00000116402	TRANSLATION	protein_coding	start	-	2	109	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039754	Alkbh4	ENSMUST00000041100	ENSMUSP00000040403	TRANSLATION	protein_coding	-	CCDS84973.1	1	300	14	0.4	1.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000089809	Rasgef1b	ENSMUST00000031276	ENSMUSP00000031276	TRANSLATION	protein_coding	-	CCDS39179.1	1	473	0	6.27	17.5	239.2	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000089809	Rasgef1b	ENSMUST00000166484	ENSMUSP00000128947	TRANSLATION	protein_coding	-	-	5	431	0	6.13	2.4	180.9	0	-4,-5	-	-	8.56	MINOR
ENSMUSG00000089809	Rasgef1b	ENSMUST00000209346	ENSMUSP00000147997	TRANSLATION	protein_coding	-	-	5	559	0	6.27	3.6	239.2	0	1,-4	-	-	12.632	MINOR
ENSMUSG00000089809	Rasgef1b	ENSMUST00000146396	ENSMUSP00000125723	TRANSLATION	protein_coding	-	-	1	116	0	0	0	0	0	1,-4	-	-	0	MINOR
ENSMUSG00000089809	Rasgef1b	ENSMUST00000161148	ENSMUSP00000125009	TRANSLATION	protein_coding	-	-	1	44	0	0	0	0	0	1,-4	-	-	0	MINOR
ENSMUSG00000089809	Rasgef1b	ENSMUST00000168092	ENSMUSP00000129652	TRANSLATION	protein_coding	-	CCDS51570.1	1	472	0	6.27	15.3	239.2	0	-4,-5	-	-	15.468	ALTERNATIVE:1
ENSMUSG00000089809	Rasgef1b	ENSMUST00000160803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089809	Rasgef1b	ENSMUST00000142639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089809	Rasgef1b	ENSMUST00000161516	ENSMUSP00000125057	TRANSLATION	protein_coding	-	-	1	102	0	0	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000089809	Rasgef1b	ENSMUST00000166632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095718	Gm6502	ENSMUST00000086050	ENSMUSP00000083215	TRANSLATION	protein_coding	-	-	5	481	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000095718	Gm6502	ENSMUST00000097478	ENSMUSP00000095086	TRANSLATION	protein_coding	stop	-	5	406	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047501	Cldn4	ENSMUST00000051401	ENSMUSP00000053420	TRANSLATION	protein_coding	-	CCDS19728.1	-	210	0	1	13.4	119.1	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000090061	Nwd2	ENSMUST00000162757	ENSMUSP00000143642	TRANSLATION	protein_coding	start	-	3	69	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090061	Nwd2	ENSMUST00000160066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090061	Nwd2	ENSMUST00000159584	ENSMUSP00000124712	TRANSLATION	protein_coding	-	CCDS51508.1	1	1742	12	0	7.6	22.4	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000090061	Nwd2	ENSMUST00000162166	ENSMUSP00000124587	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000018263	Tbx5	ENSMUST00000202504	ENSMUSP00000143828	TRANSLATION	protein_coding	stop	-	5	218	5	5	0	228	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018263	Tbx5	ENSMUST00000202723	ENSMUSP00000144418	TRANSLATION	protein_coding	stop	-	3	120	5	3	0	91.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018263	Tbx5	ENSMUST00000018407	ENSMUSP00000018407	TRANSLATION	protein_coding	-	CCDS19615.1	1	518	5	6	7.5	272.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000054920	Klhl5	ENSMUST00000204097	ENSMUSP00000144976	TRANSLATION	protein_coding	-	CCDS84883.1	1	568	0	8.02	17.1	514.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000054920	Klhl5	ENSMUST00000204348	ENSMUSP00000144732	TRANSLATION	protein_coding	-	-	5	647	0	7.22	0	483.1	0	-4,-7	-	-	8.502	MINOR
ENSMUSG00000054920	Klhl5	ENSMUST00000204479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054920	Klhl5	ENSMUST00000204829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054920	Klhl5	ENSMUST00000203561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054920	Klhl5	ENSMUST00000203538	ENSMUSP00000145269	TRANSLATION	nonsense_mediated_decay	start	-	1	258	0	3.42	0	220.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054920	Klhl5	ENSMUST00000101191	ENSMUSP00000098752	TRANSLATION	protein_coding	-	CCDS19305.2	1	708	0	8.02	9.6	514.7	0	-4,-7	-	-	14.136	MINOR
ENSMUSG00000029363	Rfc5	ENSMUST00000111953	ENSMUSP00000107584	TRANSLATION	protein_coding	-	-	1	112	12	2.14	0	38.2	0	-4,-1	-	-	2.664	MINOR
ENSMUSG00000029363	Rfc5	ENSMUST00000086461	ENSMUSP00000083652	TRANSLATION	protein_coding	-	CCDS39235.1	1	339	17	7.55	8.8	180.9	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000029363	Rfc5	ENSMUST00000129369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029363	Rfc5	ENSMUST00000150962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029363	Rfc5	ENSMUST00000126262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029363	Rfc5	ENSMUST00000123392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061882	Ccdc62	ENSMUST00000165148	ENSMUSP00000127483	TRANSLATION	protein_coding	-	CCDS51646.1	5	701	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000061882	Ccdc62	ENSMUST00000166983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061882	Ccdc62	ENSMUST00000197673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061882	Ccdc62	ENSMUST00000169898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061882	Ccdc62	ENSMUST00000094320	ENSMUSP00000091878	TRANSLATION	protein_coding	-	CCDS51646.1	5	701	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000061882	Ccdc62	ENSMUST00000171881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053268	Dspp	ENSMUST00000112771	ENSMUSP00000108391	TRANSLATION	protein_coding	-	CCDS39190.1	1	945	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000028945	Rheb	ENSMUST00000154523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028945	Rheb	ENSMUST00000146310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028945	Rheb	ENSMUST00000030787	ENSMUSP00000030787	TRANSLATION	protein_coding	-	CCDS39032.1	1	184	19	5.5	17.5	159.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000028945	Rheb	ENSMUST00000196039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091879	Vmn2r17	ENSMUST00000171841	ENSMUSP00000131450	TRANSLATION	protein_coding	-	CCDS51603.1	5	849	4	3.04	1.5	355.8	9	1,-3	-	-	15.964	PRINCIPAL:2
ENSMUSG00000091879	Vmn2r17	ENSMUST00000233724	ENSMUSP00000156890	TRANSLATION	protein_coding	-	-	-	848	4	3.04	1.5	356.4	9	1,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000091879	Vmn2r17	ENSMUST00000233536	ENSMUSP00000156549	TRANSLATION	protein_coding	-	-	-	768	4	3.04	0	356.4	9	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000091879	Vmn2r17	ENSMUST00000232833	ENSMUSP00000156483	TRANSLATION	protein_coding	-	-	-	769	4	3.04	0	355.8	9	-4,-7	-	-	15.964	ALTERNATIVE:2
ENSMUSG00000091879	Vmn2r17	ENSMUST00000232748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091879	Vmn2r17	ENSMUST00000232722	ENSMUSP00000156974	TRANSLATION	protein_coding	-	-	-	476	2	2.44	0	142.8	0	-4,-7	-	-	6.8	MINOR
ENSMUSG00000091879	Vmn2r17	ENSMUST00000233038	ENSMUSP00000156506	TRANSLATION	protein_coding	-	-	-	556	2	2.44	0	142.8	0	1,-3	-	-	6.8	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000030984	ENSMUSP00000030984	TRANSLATION	protein_coding	-	CCDS19222.1	1	1381	0	7.86	0.5	765.9	0	-4,-7	-	-	11.958	PRINCIPAL:2
ENSMUSG00000029101	Rgs12	ENSMUST00000135403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029101	Rgs12	ENSMUST00000114281	ENSMUSP00000109920	TRANSLATION	protein_coding	-	CCDS51472.1	1	723	0	7.66	0.5	717.8	0	-3,-4	-	-	8.67	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000128161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029101	Rgs12	ENSMUST00000114285	ENSMUSP00000109924	TRANSLATION	protein_coding	-	-	5	803	0	7.66	0.5	718.5	0	-4,-5	-	-	8.712	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000114284	ENSMUSP00000109923	TRANSLATION	protein_coding	-	-	5	733	0	7.66	0	717.8	0	-4,-5	-	-	8.67	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000114280	ENSMUSP00000109919	TRANSLATION	protein_coding	-	-	1	499	0	6.91	0	441.6	0	-3,-4	-	-	4.098	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000087684	ENSMUSP00000084970	TRANSLATION	protein_coding	-	-	5	1451	0	7.86	0.5	766.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000029101	Rgs12	ENSMUST00000156339	ENSMUSP00000115064	TRANSLATION	protein_coding	stop	-	3	116	0	1.33	0	166.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000201936	ENSMUSP00000143979	TRANSLATION	protein_coding	start/stop	-	3	185	0	0	0	140.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000155162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029101	Rgs12	ENSMUST00000153972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029101	Rgs12	ENSMUST00000114283	ENSMUSP00000109922	TRANSLATION	protein_coding	-	-	5	793	0	7.66	0	718.5	0	-3,-4	-	-	8.712	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000225237	ENSMUSP00000153391	TRANSLATION	protein_coding	stop	-	-	78	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000156819	ENSMUSP00000116913	TRANSLATION	protein_coding	start/stop	-	5	236	0	2.25	0	118.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000202915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029101	Rgs12	ENSMUST00000150139	ENSMUSP00000117158	TRANSLATION	protein_coding	start	-	5	107	0	0.8	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029101	Rgs12	ENSMUST00000141562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033209	Ttc28	ENSMUST00000125470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033209	Ttc28	ENSMUST00000143505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033209	Ttc28	ENSMUST00000156290	ENSMUSP00000137609	TRANSLATION	protein_coding	-	CCDS59682.1	5	2450	0	4.4	1.5	647.3	0	-4,-2	-	-	11.88	PRINCIPAL:2
ENSMUSG00000033209	Ttc28	ENSMUST00000040111	ENSMUSP00000136116	TRANSLATION	protein_coding	-	-	5	2481	0	4.46	0	647.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000033209	Ttc28	ENSMUST00000129017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033209	Ttc28	ENSMUST00000128584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000031261	ENSMUSP00000031261	TRANSLATION	nonsense_mediated_decay	-	-	2	37	0	0	0	39.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000119824	ENSMUSP00000113935	TRANSLATION	protein_coding	-	CCDS51575.1	5	117	0	0	1.5	207.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000134926	ENSMUSP00000114503	TRANSLATION	protein_coding	-	CCDS51575.1	1	117	0	0	1.5	207.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000120688	ENSMUSP00000113469	TRANSLATION	protein_coding	-	CCDS51575.1	3	117	0	0	1.5	207.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000120108	ENSMUSP00000113969	TRANSLATION	protein_coding	-	CCDS51575.1	2	117	0	0	1.5	207.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000154096	ENSMUSP00000118111	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0	0	39.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029320	1700016H13Rik	ENSMUST00000154408	ENSMUSP00000122224	TRANSLATION	nonsense_mediated_decay	-	-	2	37	0	0	0	39.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058291	Zfp68	ENSMUST00000063262	ENSMUSP00000069615	TRANSLATION	protein_coding	-	CCDS19801.1	1	606	36	1.53	0.5	217.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000058291	Zfp68	ENSMUST00000110905	ENSMUSP00000106530	TRANSLATION	protein_coding	-	CCDS19801.1	1	606	36	1.53	0.5	217.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000058291	Zfp68	ENSMUST00000197654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058291	Zfp68	ENSMUST00000199066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058291	Zfp68	ENSMUST00000085852	ENSMUSP00000083013	TRANSLATION	protein_coding	-	CCDS39347.1	1	568	36	0.73	0.5	142.7	0	-4,-5	-	-	10.368	MINOR
ENSMUSG00000058291	Zfp68	ENSMUST00000129832	ENSMUSP00000117037	TRANSLATION	protein_coding	stop	-	2	40	0	0.8	0	59.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029630	Cyp3a25	ENSMUST00000068317	ENSMUSP00000065585	TRANSLATION	protein_coding	-	CCDS19866.1	1	503	31	11.25	3.9	425.9	2	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000029630	Cyp3a25	ENSMUST00000138870	ENSMUSP00000116077	TRANSLATION	protein_coding	-	-	3	137	0	3.5	0	43.2	2	-2,-5	-	-	0	MINOR
ENSMUSG00000029630	Cyp3a25	ENSMUST00000145062	ENSMUSP00000123615	TRANSLATION	nonsense_mediated_decay	-	-	1	149	6	3.5	0	68.6	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000029630	Cyp3a25	ENSMUST00000153808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067855	Speer3	ENSMUST00000124677	ENSMUSP00000115668	TRANSLATION	protein_coding	-	CCDS39014.2	1	261	0	0	0.5	83.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034724	Cnot6l	ENSMUST00000113005	ENSMUSP00000108629	TRANSLATION	protein_coding	-	CCDS51566.1	5	555	11	10.93	6.3	115.5	0	-4,-5	-	-	19.876	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000129646	ENSMUSP00000123653	TRANSLATION	protein_coding	stop	-	5	130	0	2.98	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000137207	ENSMUSP00000121627	TRANSLATION	protein_coding	stop	-	3	87	0	1.73	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000036646	ENSMUSP00000047522	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000122003	ENSMUSP00000113821	TRANSLATION	protein_coding	-	-	1	435	7	8.93	0	89.7	0	-4,-5	-	-	9.786	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000152490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034724	Cnot6l	ENSMUST00000154500	ENSMUSP00000116326	TRANSLATION	protein_coding	stop	-	5	55	0	0.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034724	Cnot6l	ENSMUST00000137066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034724	Cnot6l	ENSMUST00000155901	ENSMUSP00000119415	TRANSLATION	protein_coding	-	CCDS19448.1	1	550	11	10.93	12.3	115.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034724	Cnot6l	ENSMUST00000141383	ENSMUSP00000114436	TRANSLATION	protein_coding	stop	-	5	99	0	2.23	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047963	Stbd1	ENSMUST00000202332	ENSMUSP00000144467	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000047963	Stbd1	ENSMUST00000200941	ENSMUSP00000144305	TRANSLATION	protein_coding	-	-	1	79	0	0	0	0	1	0,-3	-	-	0	MINOR
ENSMUSG00000047963	Stbd1	ENSMUST00000050952	ENSMUSP00000054322	TRANSLATION	protein_coding	-	CCDS19433.1	1	338	4	0	0.5	67.1	1	0,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000013936	Myl2	ENSMUST00000150535	ENSMUSP00000120274	TRANSLATION	protein_coding	stop	-	5	93	8	2.75	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000111751	ENSMUSP00000107380	TRANSLATION	protein_coding	-	CCDS39252.1	3	166	9	4.844	21.5	29.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000013936	Myl2	ENSMUST00000123913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013936	Myl2	ENSMUST00000111750	ENSMUSP00000107379	TRANSLATION	protein_coding	-	-	2	176	9	3.844	0	29.4	0	-4,-6	-	-	16.002	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000139213	ENSMUSP00000114156	TRANSLATION	protein_coding	stop	-	5	98	9	2.75	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000126006	ENSMUSP00000123261	TRANSLATION	protein_coding	start/stop	-	5	62	3	1.614	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000014080	ENSMUSP00000014080	TRANSLATION	protein_coding	-	CCDS39252.1	1	166	9	4.844	21.5	29.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000013936	Myl2	ENSMUST00000153816	ENSMUSP00000119627	TRANSLATION	protein_coding	start/stop	-	2	123	6	2.7	0	29.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000146733	ENSMUSP00000142592	TRANSLATION	protein_coding	stop	-	3	102	6	2.468	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000155612	ENSMUSP00000120105	TRANSLATION	protein_coding	stop	-	5	115	9	3.344	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013936	Myl2	ENSMUST00000147178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013936	Myl2	ENSMUST00000152744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029376	Mthfd2l	ENSMUST00000202781	ENSMUSP00000144302	TRANSLATION	protein_coding	-	-	1	62	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000029376	Mthfd2l	ENSMUST00000202852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029376	Mthfd2l	ENSMUST00000071652	ENSMUSP00000071578	TRANSLATION	protein_coding	-	CCDS39145.1	5	338	22	7	1.5	336.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000029376	Mthfd2l	ENSMUST00000201851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091827	Speer4f2	ENSMUST00000166086	ENSMUSP00000129818	TRANSLATION	protein_coding	-	-	5	295	0	0	0	63.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000037313	Tacc3	ENSMUST00000139453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037313	Tacc3	ENSMUST00000201633	ENSMUSP00000144567	TRANSLATION	protein_coding	stop	-	2	206	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037313	Tacc3	ENSMUST00000138240	ENSMUSP00000115481	TRANSLATION	protein_coding	start	-	3	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037313	Tacc3	ENSMUST00000079534	ENSMUSP00000078491	TRANSLATION	protein_coding	-	CCDS39065.1	1	630	0	1.85	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000037313	Tacc3	ENSMUST00000139888	ENSMUSP00000117407	TRANSLATION	protein_coding	start	-	3	158	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037313	Tacc3	ENSMUST00000074849	ENSMUSP00000074394	TRANSLATION	protein_coding	-	CCDS80258.1	1	637	0	1.85	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037313	Tacc3	ENSMUST00000114426	ENSMUSP00000110069	TRANSLATION	protein_coding	-	CCDS39065.1	1	630	0	1.85	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000037313	Tacc3	ENSMUST00000152847	ENSMUSP00000119560	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070780	Rbm47	ENSMUST00000200775	ENSMUSP00000144325	TRANSLATION	protein_coding	-	CCDS19313.1	1	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000113726	ENSMUSP00000109355	TRANSLATION	protein_coding	-	CCDS19313.1	1	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000200852	ENSMUSP00000144505	TRANSLATION	protein_coding	stop	-	5	158	0	0.6	0	56.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070780	Rbm47	ENSMUST00000094757	ENSMUSP00000092349	TRANSLATION	protein_coding	-	CCDS19313.1	1	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000201605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070780	Rbm47	ENSMUST00000201311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070780	Rbm47	ENSMUST00000201544	ENSMUSP00000144122	TRANSLATION	protein_coding	-	CCDS19313.1	5	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000202794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070780	Rbm47	ENSMUST00000094756	ENSMUSP00000092348	TRANSLATION	protein_coding	-	CCDS71598.1	1	521	0	1.4	1.8	127	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000070780	Rbm47	ENSMUST00000201561	ENSMUSP00000144112	TRANSLATION	protein_coding	stop	-	2	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070780	Rbm47	ENSMUST00000201670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070780	Rbm47	ENSMUST00000113724	ENSMUSP00000109353	TRANSLATION	protein_coding	-	CCDS19313.1	5	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000167950	ENSMUSP00000128016	TRANSLATION	protein_coding	-	CCDS19313.1	1	590	0	1.4	2.8	127	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000070780	Rbm47	ENSMUST00000202700	ENSMUSP00000144287	TRANSLATION	protein_coding	stop	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019179	Mdh2	ENSMUST00000138101	ENSMUSP00000136225	TRANSLATION	nonsense_mediated_decay	-	-	5	51	4	0.45	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000019179	Mdh2	ENSMUST00000143747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019179	Mdh2	ENSMUST00000200556	ENSMUSP00000142993	TRANSLATION	protein_coding	stop	-	3	199	23	5.082	0	191.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000019179	Mdh2	ENSMUST00000019323	ENSMUSP00000019323	TRANSLATION	protein_coding	-	CCDS19746.1	1	338	33	8.7	19.5	356.1	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000019179	Mdh2	ENSMUST00000130795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019179	Mdh2	ENSMUST00000196285	ENSMUSP00000143748	TRANSLATION	protein_coding	stop	-	3	153	20	4.2	0	65	0	-4,0	-	-	-1	MINOR
ENSMUSG00000019179	Mdh2	ENSMUST00000197909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041740	Rnf10	ENSMUST00000040555	ENSMUSP00000041778	TRANSLATION	protein_coding	-	CCDS80380.1	1	803	8	0.8	1.5	29.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000041740	Rnf10	ENSMUST00000200923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041740	Rnf10	ENSMUST00000153553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041740	Rnf10	ENSMUST00000112097	ENSMUSP00000107726	TRANSLATION	protein_coding	-	CCDS80381.1	1	805	8	0.8	1.5	29.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000041740	Rnf10	ENSMUST00000202855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041740	Rnf10	ENSMUST00000139853	ENSMUSP00000131696	TRANSLATION	nonsense_mediated_decay	start	-	5	656	8	0.8	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041740	Rnf10	ENSMUST00000112096	ENSMUSP00000107725	TRANSLATION	protein_coding	-	CCDS19584.1	1	804	8	0.8	1.5	29.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000041740	Rnf10	ENSMUST00000151085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041740	Rnf10	ENSMUST00000128954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041740	Rnf10	ENSMUST00000152613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041740	Rnf10	ENSMUST00000133276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029561	Oasl2	ENSMUST00000144064	ENSMUSP00000117876	TRANSLATION	nonsense_mediated_decay	start	-	1	57	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029561	Oasl2	ENSMUST00000124716	ENSMUSP00000115070	TRANSLATION	protein_coding	stop	-	3	240	3	2.28	0	164.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029561	Oasl2	ENSMUST00000146072	ENSMUSP00000117795	TRANSLATION	protein_coding	stop	-	3	101	5	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029561	Oasl2	ENSMUST00000201445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029561	Oasl2	ENSMUST00000129707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029561	Oasl2	ENSMUST00000150361	ENSMUSP00000119042	TRANSLATION	protein_coding	stop	-	3	142	5	3.35	0	21.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029561	Oasl2	ENSMUST00000201919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029561	Oasl2	ENSMUST00000031542	ENSMUSP00000031542	TRANSLATION	protein_coding	-	CCDS39226.1	1	508	14	8.58	0.5	318	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029561	Oasl2	ENSMUST00000137828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029477	Morn3	ENSMUST00000137490	ENSMUSP00000117668	TRANSLATION	protein_coding	start	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029477	Morn3	ENSMUST00000145257	ENSMUSP00000122306	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029477	Morn3	ENSMUST00000129934	ENSMUSP00000122570	TRANSLATION	protein_coding	start	-	5	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029477	Morn3	ENSMUST00000132775	ENSMUSP00000120199	TRANSLATION	nonsense_mediated_decay	-	-	1	169	0	0	0.5	80.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029477	Morn3	ENSMUST00000031437	ENSMUSP00000031437	TRANSLATION	protein_coding	-	CCDS19659.1	1	241	0	0	6.3	101.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000029477	Morn3	ENSMUST00000045843	ENSMUSP00000041714	TRANSLATION	protein_coding	-	CCDS84956.1	1	169	0	0	0.5	80.3	0	-4,-5	-	-	4.728	MINOR
ENSMUSG00000029212	Gabrb1	ENSMUST00000031122	ENSMUSP00000031122	TRANSLATION	protein_coding	-	CCDS19329.1	1	474	5	7.08	7.6	332.3	0	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000029212	Gabrb1	ENSMUST00000199967	ENSMUSP00000143682	TRANSLATION	protein_coding	stop	-	3	226	5	5.25	0	173.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072821	Gm6351	ENSMUST00000101021	ENSMUSP00000098583	TRANSLATION	protein_coding	-	-	5	480	2	0	0.5	0	0	-4,-6	-	-	2	ALTERNATIVE:2
ENSMUSG00000072821	Gm6351	ENSMUST00000139102	ENSMUSP00000115801	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072821	Gm6351	ENSMUST00000139828	ENSMUSP00000119594	TRANSLATION	protein_coding	-	-	5	481	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:5
ENSMUSG00000091794	Vmn2r18	ENSMUST00000233599	ENSMUSP00000156703	TRANSLATION	protein_coding	-	-	-	871	5	3.8188	0	396	14	-1,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000091794	Vmn2r18	ENSMUST00000232905	ENSMUSP00000156470	TRANSLATION	protein_coding	-	-	-	795	5	3.0188	0	377.5	14	-1,-5	-	-	14.288	MINOR
ENSMUSG00000091794	Vmn2r18	ENSMUST00000232853	ENSMUSP00000156972	TRANSLATION	nonsense_mediated_decay	-	-	-	182	5	1.0648	0	37.9	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000091794	Vmn2r18	ENSMUST00000233687	ENSMUSP00000156670	TRANSLATION	nonsense_mediated_decay	-	-	-	478	5	1.4188	0	121.1	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000091794	Vmn2r18	ENSMUST00000165928	ENSMUSP00000127506	TRANSLATION	protein_coding	-	CCDS51711.1	5	788	5	3.38	0.5	395.5	14	-4,-5	-	-	16.094	PRINCIPAL:2
ENSMUSG00000029248	Thegl	ENSMUST00000031161	ENSMUSP00000031161	TRANSLATION	protein_coding	-	CCDS19369.1	1	459	0	0	0.5	177	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029248	Thegl	ENSMUST00000118941	ENSMUSP00000112660	TRANSLATION	protein_coding	-	-	3	126	0	0	0	40.1	0	-4,-7	-	-	0	MINOR
ENSMUSG00000029248	Thegl	ENSMUST00000117880	ENSMUSP00000112814	TRANSLATION	protein_coding	-	CCDS19369.1	1	459	0	0	0.5	177	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049907	Rasl11b	ENSMUST00000183995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049907	Rasl11b	ENSMUST00000201837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049907	Rasl11b	ENSMUST00000051937	ENSMUSP00000053389	TRANSLATION	protein_coding	-	CCDS39113.1	1	247	15	2.45	6.3	102.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000072813	E330014E10Rik	ENSMUST00000071182	ENSMUSP00000071174	TRANSLATION	protein_coding	-	CCDS51565.1	1	481	2	0	1.5	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000056602	Fry	ENSMUST00000202566	ENSMUSP00000144657	TRANSLATION	protein_coding	start	-	5	1016	0	0	0	243.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056602	Fry	ENSMUST00000200964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000200960	ENSMUSP00000144674	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056602	Fry	ENSMUST00000201854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000239118	ENSMUSP00000158877	TRANSLATION	protein_coding	-	-	-	3017	0	0	0	799.2	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000056602	Fry	ENSMUST00000087204	ENSMUSP00000084454	TRANSLATION	protein_coding	-	CCDS51708.1	5	3020	0	0	0.5	799.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000056602	Fry	ENSMUST00000202841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000202571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000201628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000200863	ENSMUSP00000143845	TRANSLATION	protein_coding	start	-	1	653	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056602	Fry	ENSMUST00000202530	ENSMUSP00000144277	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056602	Fry	ENSMUST00000201634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000200750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000201196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000202630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000203000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000202070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056602	Fry	ENSMUST00000202600	ENSMUSP00000144317	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029729	Zkscan1	ENSMUST00000110963	ENSMUSP00000106588	TRANSLATION	protein_coding	-	CCDS19788.1	1	488	24	1.8	1.7	290.4	0	-4,-5	-	-	16.212	MINOR
ENSMUSG00000029729	Zkscan1	ENSMUST00000019660	ENSMUSP00000019660	TRANSLATION	protein_coding	-	CCDS19789.1	1	561	24	1.8	7.5	325.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029729	Zkscan1	ENSMUST00000066617	ENSMUSP00000068480	TRANSLATION	protein_coding	-	CCDS19788.1	5	488	24	1.8	1.7	290.4	0	-4,-5	-	-	16.212	MINOR
ENSMUSG00000029729	Zkscan1	ENSMUST00000110962	ENSMUSP00000106587	TRANSLATION	protein_coding	-	CCDS19788.1	1	488	24	1.8	1.7	290.4	0	-4,-5	-	-	16.212	MINOR
ENSMUSG00000041505	Gm3402	ENSMUST00000200228	ENSMUSP00000143398	TRANSLATION	protein_coding	-	CCDS85004.1	5	315	0	0	0.5	28.8	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000041505	Gm3402	ENSMUST00000036715	ENSMUSP00000036997	TRANSLATION	protein_coding	-	-	5	326	0	0	0	28.8	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000041505	Gm3402	ENSMUST00000077133	ENSMUSP00000076380	TRANSLATION	protein_coding	-	-	5	307	0	0	0.5	28.8	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000018001	Cyth3	ENSMUST00000177196	ENSMUSP00000135548	TRANSLATION	protein_coding	stop	-	3	9	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018001	Cyth3	ENSMUST00000198355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018001	Cyth3	ENSMUST00000110727	ENSMUSP00000106355	TRANSLATION	protein_coding	-	CCDS51691.1	1	351	12	8.816	6.6	323.6	0	-4,-5	-	-	20.436	ALTERNATIVE:1
ENSMUSG00000018001	Cyth3	ENSMUST00000177281	ENSMUSP00000135287	TRANSLATION	protein_coding	stop	-	5	93	0	0.816	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018001	Cyth3	ENSMUST00000116456	ENSMUSP00000112157	TRANSLATION	protein_coding	-	CCDS19845.1	1	399	12	8.816	7.9	323.6	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000018001	Cyth3	ENSMUST00000131436	ENSMUSP00000118290	TRANSLATION	protein_coding	stop	-	3	70	0	1.816	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042010	Acacb	ENSMUST00000146841	ENSMUSP00000115432	TRANSLATION	protein_coding	stop	-	5	146	0	3	0	67.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042010	Acacb	ENSMUST00000031583	ENSMUSP00000031583	TRANSLATION	protein_coding	-	CCDS19561.1	1	2448	37	42.33	0.5	1956.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000042010	Acacb	ENSMUST00000143276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042010	Acacb	ENSMUST00000102582	ENSMUSP00000099642	TRANSLATION	protein_coding	-	CCDS19561.1	5	2448	37	42.33	0.5	1956.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000042010	Acacb	ENSMUST00000142489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000081683	Fzd10	ENSMUST00000117102	ENSMUSP00000114114	TRANSLATION	protein_coding	-	CCDS51652.1	-	582	0	0.32	7.6	569.1	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000029313	Aff1	ENSMUST00000152145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029313	Aff1	ENSMUST00000153165	ENSMUSP00000119631	TRANSLATION	protein_coding	stop	-	1	870	0	2.45	0	878.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029313	Aff1	ENSMUST00000126335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029313	Aff1	ENSMUST00000031256	ENSMUSP00000031256	TRANSLATION	protein_coding	-	CCDS39189.1	5	1226	0	2.45	0.5	1436	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029313	Aff1	ENSMUST00000054979	ENSMUSP00000059744	TRANSLATION	protein_coding	-	CCDS39188.1	1	1218	0	2.45	0.5	1436	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000038676	Ucn	ENSMUST00000043475	ENSMUSP00000035321	TRANSLATION	protein_coding	-	CCDS19174.1	1	122	0	0.8	1.5	64.5	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038676	Ucn	ENSMUST00000201184	ENSMUSP00000144390	TRANSLATION	protein_coding	-	CCDS19174.1	1	122	0	0.8	1.5	64.5	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000115427	ENSMUSP00000111087	TRANSLATION	protein_coding	-	CCDS71541.1	1	402	19	1.2	0.5	111.3	4	-4,-5	-	-	17.892	MINOR
ENSMUSG00000015653	Steap2	ENSMUST00000149412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015653	Steap2	ENSMUST00000115426	ENSMUSP00000111086	TRANSLATION	protein_coding	-	CCDS39007.1	1	489	19	1.2	14.8	113.1	6	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000015797	ENSMUSP00000015797	TRANSLATION	protein_coding	-	CCDS39007.1	1	489	19	1.2	14.8	113.1	6	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000115424	ENSMUSP00000111084	TRANSLATION	protein_coding	-	CCDS39007.1	1	489	19	1.2	14.8	113.1	6	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000115425	ENSMUSP00000111085	TRANSLATION	protein_coding	-	CCDS39007.1	1	489	19	1.2	14.8	113.1	6	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000150238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015653	Steap2	ENSMUST00000164219	ENSMUSP00000132501	TRANSLATION	protein_coding	-	CCDS39007.1	3	489	19	1.2	14.8	113.1	6	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015653	Steap2	ENSMUST00000148333	ENSMUSP00000116910	TRANSLATION	protein_coding	stop	-	1	458	19	1.2	0	113.1	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000035297	Cops4	ENSMUST00000045993	ENSMUSP00000048416	TRANSLATION	protein_coding	-	CCDS19463.1	1	406	0	10.25	17.5	64.5	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000035297	Cops4	ENSMUST00000123492	ENSMUSP00000119737	TRANSLATION	nonsense_mediated_decay	start	-	5	253	0	6	0	29.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035297	Cops4	ENSMUST00000147729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035297	Cops4	ENSMUST00000151414	ENSMUSP00000114585	TRANSLATION	protein_coding	stop	-	3	244	0	6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035297	Cops4	ENSMUST00000123559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035297	Cops4	ENSMUST00000146476	ENSMUSP00000121979	TRANSLATION	protein_coding	stop	-	3	206	0	5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035297	Cops4	ENSMUST00000123069	ENSMUSP00000115767	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061461	Smim20	ENSMUST00000203623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061461	Smim20	ENSMUST00000204218	ENSMUSP00000145521	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	55.2	1	0,1	-	-	-1	MINOR
ENSMUSG00000061461	Smim20	ENSMUST00000204839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061461	Smim20	ENSMUST00000147148	ENSMUSP00000121637	TRANSLATION	protein_coding	-	CCDS51502.1	1	69	0	0	12.6	94.9	1	0,1	-	-	10	PRINCIPAL:1
ENSMUSG00000061461	Smim20	ENSMUST00000204465	ENSMUSP00000144695	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	55.2	1	0,1	-	-	-1	MINOR
ENSMUSG00000061461	Smim20	ENSMUST00000204089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034687	Fras1	ENSMUST00000196751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034687	Fras1	ENSMUST00000036019	ENSMUSP00000043250	TRANSLATION	protein_coding	-	CCDS19450.1	1	4010	26	7.38	0.5	1133.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034687	Fras1	ENSMUST00000197126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034687	Fras1	ENSMUST00000199204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034687	Fras1	ENSMUST00000199841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034687	Fras1	ENSMUST00000198016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029578	Wipi2	ENSMUST00000110778	ENSMUSP00000106405	TRANSLATION	protein_coding	-	-	5	425	0	3.52	6.9	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000029578	Wipi2	ENSMUST00000143980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029578	Wipi2	ENSMUST00000036872	ENSMUSP00000045201	TRANSLATION	protein_coding	-	CCDS19828.1	1	445	0	3.52	1.5	0	0	-4,-5	-	-	6.17	MINOR
ENSMUSG00000029578	Wipi2	ENSMUST00000153936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029578	Wipi2	ENSMUST00000197864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066640	Fbxl18	ENSMUST00000035985	ENSMUSP00000041700	TRANSLATION	protein_coding	-	CCDS19831.1	1	707	0	0	1.5	29	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000066640	Fbxl18	ENSMUST00000110766	ENSMUSP00000106394	TRANSLATION	protein_coding	-	-	1	771	0	0	0.5	29	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000066640	Fbxl18	ENSMUST00000199067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066640	Fbxl18	ENSMUST00000197596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066640	Fbxl18	ENSMUST00000156725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015806	Qdpr	ENSMUST00000118097	ENSMUSP00000113958	TRANSLATION	protein_coding	-	-	5	189	19	5.66	0	0	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000015950	ENSMUSP00000015950	TRANSLATION	protein_coding	-	CCDS19272.1	1	241	29	7.41	13.9	30.5	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000015806	Qdpr	ENSMUST00000197946	ENSMUSP00000143584	TRANSLATION	protein_coding	-	-	5	213	25	6.66	0	0	0	-4,0	-	-	7.836	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000149290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015806	Qdpr	ENSMUST00000127562	ENSMUSP00000115453	TRANSLATION	protein_coding	stop	-	5	136	15	3.66	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000117425	ENSMUSP00000112469	TRANSLATION	protein_coding	-	-	3	189	19	5.66	0	0	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000120867	ENSMUSP00000113203	TRANSLATION	protein_coding	-	-	5	189	19	5.66	0	0	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000198258	ENSMUSP00000143741	TRANSLATION	protein_coding	-	-	5	139	15	4	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000154962	ENSMUSP00000122081	TRANSLATION	protein_coding	stop	-	3	159	15	4.5	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000015806	Qdpr	ENSMUST00000200259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000082361	Btc	ENSMUST00000201252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000082361	Btc	ENSMUST00000121044	ENSMUSP00000112765	TRANSLATION	protein_coding	-	CCDS19422.1	1	177	0	2.2	2.7	23.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000082361	Btc	ENSMUST00000200860	ENSMUSP00000143920	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	0.2	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000082361	Btc	ENSMUST00000201090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029093	Sorcs2	ENSMUST00000141508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029093	Sorcs2	ENSMUST00000070720	ENSMUSP00000065292	TRANSLATION	protein_coding	-	-	1	232	0	1.564	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000029093	Sorcs2	ENSMUST00000137040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029093	Sorcs2	ENSMUST00000037370	ENSMUSP00000041828	TRANSLATION	protein_coding	-	CCDS19237.1	1	1159	0	11.474	1.5	497.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029093	Sorcs2	ENSMUST00000135324	ENSMUSP00000123543	TRANSLATION	protein_coding	stop	-	3	172	0	2.074	0	80.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092166	Gm7942	ENSMUST00000238517	ENSMUSP00000158634	TRANSLATION	protein_coding	-	-	-	481	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000092166	Gm7942	ENSMUST00000163216	ENSMUSP00000126247	TRANSLATION	protein_coding	start	-	5	499	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092166	Gm7942	ENSMUST00000238343	ENSMUSP00000158667	TRANSLATION	protein_coding	-	-	-	198	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000036285	Noa1	ENSMUST00000047860	ENSMUSP00000045948	TRANSLATION	protein_coding	-	CCDS19373.1	1	693	14	0.24	1.5	34.7	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000036285	Noa1	ENSMUST00000139435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036285	Noa1	ENSMUST00000150722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036285	Noa1	ENSMUST00000150451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111375	Btbd8	ENSMUST00000162298	ENSMUSP00000149290	TRANSLATION	protein_coding	-	-	5	251	0	2.2	0	86.6	0	-3,-6	-	-	2.562	MINOR
ENSMUSG00000111375	Btbd8	ENSMUST00000100951	ENSMUSP00000098511	TRANSLATION	protein_coding	-	-	5	1239	0	0	0	76.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000111375	Btbd8	ENSMUST00000211896	ENSMUSP00000148277	TRANSLATION	protein_coding	-	-	5	1751	0	3.92	0	201.9	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000111375	Btbd8	ENSMUST00000212858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111375	Btbd8	ENSMUST00000060553	ENSMUSP00000056529	TRANSLATION	protein_coding	-	CCDS51585.1	1	443	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000111375	Btbd8	ENSMUST00000152474	ENSMUSP00000114881	TRANSLATION	protein_coding	stop	-	1	405	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000111375	Btbd8	ENSMUST00000094541	ENSMUSP00000092119	TRANSLATION	protein_coding	-	CCDS57370.1	5	377	0	3.92	0.5	125.4	0	-3,-6	-	-	7.41	MINOR
ENSMUSG00000111375	Btbd8	ENSMUST00000133800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029538	Srsf9	ENSMUST00000142318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029538	Srsf9	ENSMUST00000144000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029538	Srsf9	ENSMUST00000031513	ENSMUSP00000031513	TRANSLATION	protein_coding	-	CCDS19587.1	1	222	0	4.89	7.5	112.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029538	Srsf9	ENSMUST00000209604	ENSMUSP00000147772	TRANSLATION	nonsense_mediated_decay	start	-	5	62	0	1	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029538	Srsf9	ENSMUST00000149510	ENSMUSP00000121845	TRANSLATION	protein_coding	start	-	3	158	0	1.64	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016510	Mtif3	ENSMUST00000066675	ENSMUSP00000063398	TRANSLATION	protein_coding	-	CCDS19874.1	1	276	0	2.68	1.5	43.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000016510	Mtif3	ENSMUST00000140526	ENSMUSP00000120064	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016510	Mtif3	ENSMUST00000110564	ENSMUSP00000106193	TRANSLATION	protein_coding	-	CCDS19874.1	1	276	0	2.68	1.5	43.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000016510	Mtif3	ENSMUST00000110566	ENSMUSP00000106195	TRANSLATION	protein_coding	-	CCDS19874.1	1	276	0	2.68	1.5	43.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000016510	Mtif3	ENSMUST00000125217	ENSMUSP00000120283	TRANSLATION	protein_coding	stop	-	3	113	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016510	Mtif3	ENSMUST00000016654	ENSMUSP00000016654	TRANSLATION	protein_coding	-	CCDS19874.1	1	276	0	2.68	1.5	43.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000106677	Ugt2a1	ENSMUST00000147854	ENSMUSP00000114583	TRANSLATION	protein_coding	-	CCDS39129.1	1	528	17	3.4	1.5	776.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029208	Guf1	ENSMUST00000125543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029208	Guf1	ENSMUST00000125660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029208	Guf1	ENSMUST00000202180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029208	Guf1	ENSMUST00000154728	ENSMUSP00000144246	TRANSLATION	nonsense_mediated_decay	-	-	1	302	18	6.066	0	182.5	0	0,2	-	-	-1	MINOR
ENSMUSG00000029208	Guf1	ENSMUST00000031113	ENSMUSP00000031113	TRANSLATION	protein_coding	-	CCDS80296.1	1	563	18	12.3	0.5	421.6	0	0,2	-	-	11.478	MINOR
ENSMUSG00000029208	Guf1	ENSMUST00000144363	ENSMUSP00000114707	TRANSLATION	nonsense_mediated_decay	start	-	2	296	18	6.066	0	182.5	0	-3,1	-	-	-1	MINOR
ENSMUSG00000029208	Guf1	ENSMUST00000087228	ENSMUSP00000084480	TRANSLATION	protein_coding	-	CCDS19322.1	1	651	18	14.498	0.5	457	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000029208	Guf1	ENSMUST00000132169	ENSMUSP00000144290	TRANSLATION	nonsense_mediated_decay	-	-	1	302	18	6.066	0	182.5	0	0,2	-	-	-1	MINOR
ENSMUSG00000029208	Guf1	ENSMUST00000173205	ENSMUSP00000133467	TRANSLATION	protein_coding	start	-	5	590	18	13.498	0	429.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029390	Tmed2	ENSMUST00000197112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029390	Tmed2	ENSMUST00000135464	ENSMUSP00000120809	TRANSLATION	protein_coding	start	-	1	112	0	0.75	0	83.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029390	Tmed2	ENSMUST00000124529	ENSMUSP00000115169	TRANSLATION	protein_coding	start	-	2	176	0	1.75	0	134.8	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000029390	Tmed2	ENSMUST00000060226	ENSMUSP00000054834	TRANSLATION	protein_coding	-	CCDS19679.1	1	201	0	3.58	12.3	168.1	1	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000029390	Tmed2	ENSMUST00000200031	ENSMUSP00000142701	TRANSLATION	nonsense_mediated_decay	start	-	5	55	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034826	Nup54	ENSMUST00000038514	ENSMUSP00000046540	TRANSLATION	protein_coding	-	CCDS19430.1	1	510	4	11.28	6.3	156	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000034826	Nup54	ENSMUST00000135112	ENSMUSP00000117237	TRANSLATION	protein_coding	stop	-	2	122	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034826	Nup54	ENSMUST00000201228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034826	Nup54	ENSMUST00000142525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034826	Nup54	ENSMUST00000123694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034826	Nup54	ENSMUST00000130156	ENSMUSP00000120937	TRANSLATION	protein_coding	start/stop	-	3	132	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034826	Nup54	ENSMUST00000146470	ENSMUSP00000121171	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034826	Nup54	ENSMUST00000122893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029432	Nipsnap2	ENSMUST00000086046	ENSMUSP00000083211	TRANSLATION	protein_coding	-	CCDS19698.1	1	281	0	2.172	1.5	108.3	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000029432	Nipsnap2	ENSMUST00000186265	ENSMUSP00000141131	TRANSLATION	protein_coding	-	CCDS19698.1	2	281	0	2.172	1.5	108.3	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000029432	Nipsnap2	ENSMUST00000195946	ENSMUSP00000142916	TRANSLATION	nonsense_mediated_decay	-	-	5	111	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000029432	Nipsnap2	ENSMUST00000124342	ENSMUSP00000117705	TRANSLATION	nonsense_mediated_decay	-	-	2	281	0	2.172	1.5	108.3	0	-3,1	-	-	-1	MINOR
ENSMUSG00000029432	Nipsnap2	ENSMUST00000137604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029432	Nipsnap2	ENSMUST00000135160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025538	Sumf2	ENSMUST00000201029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025538	Sumf2	ENSMUST00000201874	ENSMUSP00000144230	TRANSLATION	protein_coding	start/stop	-	3	135	0	2.5	0	79.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000025538	Sumf2	ENSMUST00000137357	ENSMUSP00000144155	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	2.73	0	75	0	4,-1	-	-	-1	MINOR
ENSMUSG00000025538	Sumf2	ENSMUST00000122826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025538	Sumf2	ENSMUST00000171300	ENSMUSP00000126036	TRANSLATION	protein_coding	-	CCDS19700.1	1	308	9	7	1.5	284.6	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000025538	Sumf2	ENSMUST00000153063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029014	Dnajc2	ENSMUST00000132962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029014	Dnajc2	ENSMUST00000145955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029014	Dnajc2	ENSMUST00000115195	ENSMUSP00000110849	TRANSLATION	protein_coding	-	-	5	547	0	6.2386	7.4	213	0	-4,-5	-	-	14	MINOR
ENSMUSG00000029014	Dnajc2	ENSMUST00000115193	ENSMUSP00000110847	TRANSLATION	protein_coding	-	-	1	619	0	5.4886	0	212.1	0	-4,-6	-	-	10.446	MINOR
ENSMUSG00000029014	Dnajc2	ENSMUST00000115192	ENSMUSP00000110846	TRANSLATION	protein_coding	-	-	2	191	0	1.3886	0	57.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029014	Dnajc2	ENSMUST00000147987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029014	Dnajc2	ENSMUST00000030771	ENSMUSP00000030771	TRANSLATION	protein_coding	-	CCDS19107.1	1	621	0	6.2386	13.8	213	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000029673	Auts2	ENSMUST00000182974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000159507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000187544	ENSMUSP00000139759	TRANSLATION	protein_coding	start	-	5	1013	0	0	0	360.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029673	Auts2	ENSMUST00000185450	ENSMUSP00000141082	TRANSLATION	protein_coding	start/stop	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029673	Auts2	ENSMUST00000100564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000198165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000198149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000071591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000196613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000161226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000160135	ENSMUSP00000125706	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029673	Auts2	ENSMUST00000160071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000161804	ENSMUSP00000124027	TRANSLATION	protein_coding	-	-	1	804	0	0	0	360.4	0	-4,-6	-	-	6	PRINCIPAL:5
ENSMUSG00000029673	Auts2	ENSMUST00000162101	ENSMUSP00000138441	TRANSLATION	protein_coding	start	-	3	142	0	0	0	232.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029673	Auts2	ENSMUST00000162979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000182575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000161374	ENSMUSP00000124730	TRANSLATION	protein_coding	-	-	1	789	0	0	0	360.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000029673	Auts2	ENSMUST00000161108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029673	Auts2	ENSMUST00000183153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029673	Auts2	ENSMUST00000178555	ENSMUSP00000136954	TRANSLATION	protein_coding	stop	-	-	103	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042744	Hectd4	ENSMUST00000130655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042744	Hectd4	ENSMUST00000155743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042744	Hectd4	ENSMUST00000042614	ENSMUSP00000048345	TRANSLATION	protein_coding	-	CCDS57377.1	5	4418	0	3.9	1.5	133.5	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000042744	Hectd4	ENSMUST00000201669	ENSMUSP00000144313	TRANSLATION	protein_coding	start/stop	-	5	678	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042744	Hectd4	ENSMUST00000128514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042744	Hectd4	ENSMUST00000100769	ENSMUSP00000098332	TRANSLATION	protein_coding	start	-	1	1014	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042744	Hectd4	ENSMUST00000148368	ENSMUSP00000114491	TRANSLATION	protein_coding	start/stop	-	5	221	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004821	Tmed11	ENSMUST00000004943	ENSMUSP00000004943	TRANSLATION	protein_coding	-	CCDS19519.1	1	215	0	0	2.7	149.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029120	Ppp2r2c	ENSMUST00000031003	ENSMUSP00000031003	TRANSLATION	protein_coding	-	CCDS19244.1	1	447	0	8.4	19.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000029120	Ppp2r2c	ENSMUST00000201156	ENSMUSP00000144342	TRANSLATION	protein_coding	-	-	5	76	0	1.3	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029120	Ppp2r2c	ENSMUST00000138124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010825	Grid2ip	ENSMUST00000120825	ENSMUSP00000113443	TRANSLATION	protein_coding	-	CCDS84992.1	5	1031	0	7.305	2.7	366.7	0	-4,-7	-	-	7.98	MINOR
ENSMUSG00000010825	Grid2ip	ENSMUST00000110733	ENSMUSP00000106361	TRANSLATION	protein_coding	-	CCDS51689.1	1	1203	0	8.305	1.5	400.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000010825	Grid2ip	ENSMUST00000010969	ENSMUSP00000010969	TRANSLATION	protein_coding	-	CCDS19841.1	1	1024	0	7.305	1.5	366.7	0	-4,-7	-	-	7.98	MINOR
ENSMUSG00000010825	Grid2ip	ENSMUST00000196148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010825	Grid2ip	ENSMUST00000138948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029088	Kcnip4	ENSMUST00000172363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029088	Kcnip4	ENSMUST00000101215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029088	Kcnip4	ENSMUST00000101214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029088	Kcnip4	ENSMUST00000175660	ENSMUSP00000135799	TRANSLATION	protein_coding	-	CCDS57340.1	1	225	17	5.75	15.3	92.5	0	-4,-7	-	-	20.002	MINOR
ENSMUSG00000029088	Kcnip4	ENSMUST00000166924	ENSMUSP00000131276	TRANSLATION	protein_coding	-	CCDS57339.1	1	233	17	6.55	11.8	92.5	1	-4,-7	-	-	20.618	ALTERNATIVE:1
ENSMUSG00000029088	Kcnip4	ENSMUST00000087395	ENSMUSP00000084656	TRANSLATION	protein_coding	-	CCDS57342.1	5	250	17	6.23	9.6	92.5	0	-4,-6	-	-	19.366	MINOR
ENSMUSG00000029088	Kcnip4	ENSMUST00000176191	ENSMUSP00000135071	TRANSLATION	protein_coding	-	CCDS57341.1	5	216	17	5.99	7.2	92.5	0	-4,-5	-	-	18.218	MINOR
ENSMUSG00000029088	Kcnip4	ENSMUST00000176978	ENSMUSP00000134758	TRANSLATION	protein_coding	-	CCDS39084.1	1	229	17	6.75	13.3	92.5	1	-2,-5	-	-	21.44	PRINCIPAL:3
ENSMUSG00000066975	Cryba4	ENSMUST00000112385	ENSMUSP00000108004	TRANSLATION	protein_coding	-	CCDS19536.1	1	196	0	4.4	15.1	181.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000066975	Cryba4	ENSMUST00000112383	ENSMUSP00000108002	TRANSLATION	protein_coding	-	CCDS84931.1	1	183	0	4	1.7	180.6	0	-4,-5	-	-	11.336	MINOR
ENSMUSG00000066975	Cryba4	ENSMUST00000086629	ENSMUSP00000083826	TRANSLATION	protein_coding	-	CCDS19536.1	1	196	0	4.4	15.1	181.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000059325	Hopx	ENSMUST00000120827	ENSMUSP00000113295	TRANSLATION	protein_coding	-	CCDS39120.1	1	73	0	1.75	9.5	40.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059325	Hopx	ENSMUST00000081964	ENSMUSP00000080630	TRANSLATION	protein_coding	-	CCDS39120.1	1	73	0	1.75	9.5	40.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059325	Hopx	ENSMUST00000113453	ENSMUSP00000109080	TRANSLATION	protein_coding	-	CCDS39120.1	1	73	0	1.75	9.5	40.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047881	Rell1	ENSMUST00000127314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047881	Rell1	ENSMUST00000128967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047881	Rell1	ENSMUST00000154532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047881	Rell1	ENSMUST00000087327	ENSMUSP00000084585	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000047881	Rell1	ENSMUST00000154169	ENSMUSP00000118125	TRANSLATION	protein_coding	-	CCDS39093.1	1	272	0	0	7.5	81.2	0	2,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000079439	Gm11116	ENSMUST00000113257	ENSMUSP00000108882	TRANSLATION	protein_coding	start	-	5	17	0	0	0	0	0	-2,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000066861	Oas1g	ENSMUST00000086368	ENSMUSP00000083555	TRANSLATION	protein_coding	-	CCDS39245.1	1	367	12	5	1.5	326.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000066861	Oas1g	ENSMUST00000162096	ENSMUSP00000124597	TRANSLATION	nonsense_mediated_decay	-	-	1	234	7	3.12	0	118.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066861	Oas1g	ENSMUST00000161809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042249	Grk3	ENSMUST00000200332	ENSMUSP00000142926	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042249	Grk3	ENSMUST00000197888	ENSMUSP00000142968	TRANSLATION	protein_coding	-	-	1	556	25	15.75	0	303.2	0	-4,-5	-	-	9.57	MINOR
ENSMUSG00000042249	Grk3	ENSMUST00000197776	ENSMUSP00000143427	TRANSLATION	protein_coding	-	-	1	217	0	5	0	65.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042249	Grk3	ENSMUST00000065167	ENSMUSP00000070445	TRANSLATION	protein_coding	-	CCDS19545.1	1	688	25	18.75	14.3	343.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042249	Grk3	ENSMUST00000199337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042249	Grk3	ENSMUST00000195928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000197366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000196918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000133952	ENSMUSP00000143327	TRANSLATION	protein_coding	start	-	3	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040407	Akap9	ENSMUST00000196350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000196837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000141817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000143365	ENSMUSP00000117209	TRANSLATION	protein_coding	stop	-	1	581	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040407	Akap9	ENSMUST00000238634	ENSMUSP00000158625	TRANSLATION	protein_coding	stop	-	-	282	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040407	Akap9	ENSMUST00000132058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000140977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040407	Akap9	ENSMUST00000044492	ENSMUSP00000046129	TRANSLATION	protein_coding	-	CCDS19070.1	1	3779	0	0	0.5	83.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040407	Akap9	ENSMUST00000123119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000176863	ENSMUSP00000135836	TRANSLATION	protein_coding	start/stop	-	3	198	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040407	Akap9	ENSMUST00000198973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040407	Akap9	ENSMUST00000147629	ENSMUSP00000133522	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040407	Akap9	ENSMUST00000177448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038072	Galnt11	ENSMUST00000114952	ENSMUSP00000110602	TRANSLATION	protein_coding	-	CCDS19133.1	1	608	23	8.54	2.7	186.7	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038072	Galnt11	ENSMUST00000196213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038072	Galnt11	ENSMUST00000144971	ENSMUSP00000115282	TRANSLATION	protein_coding	stop	-	5	46	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038072	Galnt11	ENSMUST00000045737	ENSMUSP00000036240	TRANSLATION	protein_coding	-	CCDS19133.1	1	608	23	8.54	2.7	186.7	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038072	Galnt11	ENSMUST00000114950	ENSMUSP00000110600	TRANSLATION	protein_coding	-	CCDS19133.1	1	608	23	8.54	2.7	186.7	1	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053293	Pom121	ENSMUST00000111171	ENSMUSP00000106801	TRANSLATION	protein_coding	-	CCDS51662.1	1	1200	0	1.15	0.5	363.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029427	Zcchc8	ENSMUST00000200161	ENSMUSP00000143723	TRANSLATION	protein_coding	start	-	5	103	3	0	0	25.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029427	Zcchc8	ENSMUST00000031376	ENSMUSP00000031376	TRANSLATION	protein_coding	-	-	1	709	4	1.4	0.5	86.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029427	Zcchc8	ENSMUST00000196333	ENSMUSP00000143139	TRANSLATION	nonsense_mediated_decay	start	-	5	173	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029427	Zcchc8	ENSMUST00000196042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029427	Zcchc8	ENSMUST00000200503	ENSMUSP00000142383	TRANSLATION	protein_coding	start/stop	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029427	Zcchc8	ENSMUST00000198826	ENSMUSP00000143781	TRANSLATION	nonsense_mediated_decay	start	-	5	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029427	Zcchc8	ENSMUST00000196001	ENSMUSP00000142531	TRANSLATION	nonsense_mediated_decay	start	-	5	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029427	Zcchc8	ENSMUST00000199875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029427	Zcchc8	ENSMUST00000196282	ENSMUSP00000142363	TRANSLATION	protein_coding	-	CCDS80406.1	5	709	4	1.4	0.5	86.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000072762	4930522L14Rik	ENSMUST00000112547	ENSMUSP00000108166	TRANSLATION	protein_coding	-	-	5	666	80	2.15	0.5	407.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072762	4930522L14Rik	ENSMUST00000100937	ENSMUSP00000098497	TRANSLATION	protein_coding	-	-	1	64	0	1.75	1.5	81.7	0	-4,-5	-	-	4.884	MINOR
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000140653	ENSMUSP00000144240	TRANSLATION	protein_coding	-	-	1	83	0	0	0	115.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000150088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000031091	ENSMUSP00000031091	TRANSLATION	protein_coding	-	-	5	1396	0	0	0.5	2272.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000140063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000202510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000201720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029190	D5Ertd579e	ENSMUST00000132383	ENSMUSP00000116548	TRANSLATION	protein_coding	start	-	2	203	0	0	0	298	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029369	Afm	ENSMUST00000128740	ENSMUSP00000117180	TRANSLATION	protein_coding	-	-	1	430	0	7.6	0	326.5	0	4,-1	-	-	1.32	MINOR
ENSMUSG00000029369	Afm	ENSMUST00000113179	ENSMUSP00000108804	TRANSLATION	protein_coding	-	CCDS39141.1	1	608	0	9.94	1.5	473.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029640	Usp12	ENSMUST00000085614	ENSMUSP00000082754	TRANSLATION	protein_coding	-	CCDS39395.1	1	370	8	7.5	17.5	206.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000029640	Usp12	ENSMUST00000124009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029640	Usp12	ENSMUST00000138202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029518	Rab35	ENSMUST00000138885	ENSMUSP00000138402	TRANSLATION	nonsense_mediated_decay	-	-	3	55	9	1.15	0	30.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029518	Rab35	ENSMUST00000031492	ENSMUSP00000031492	TRANSLATION	protein_coding	-	CCDS19596.1	1	201	24	5.25	18.2	200.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029209	Gnpda2	ENSMUST00000173927	ENSMUSP00000133490	TRANSLATION	protein_coding	-	CCDS84888.1	5	274	15	5.5	19.5	62.4	0	-4,-5	-	-	21.076	ALTERNATIVE:1
ENSMUSG00000029209	Gnpda2	ENSMUST00000031117	ENSMUSP00000031117	TRANSLATION	protein_coding	-	CCDS19324.1	1	276	15	5.5	19.5	73.8	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000029209	Gnpda2	ENSMUST00000166298	ENSMUSP00000128233	TRANSLATION	protein_coding	-	CCDS84888.1	5	274	15	5.5	19.5	62.4	0	-4,-5	-	-	21.076	ALTERNATIVE:1
ENSMUSG00000029209	Gnpda2	ENSMUST00000139632	ENSMUSP00000121014	TRANSLATION	nonsense_mediated_decay	-	-	5	276	15	5.5	19.5	73.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029209	Gnpda2	ENSMUST00000154018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029209	Gnpda2	ENSMUST00000153536	ENSMUSP00000121441	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	1.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029209	Gnpda2	ENSMUST00000120789	ENSMUSP00000112484	TRANSLATION	protein_coding	-	-	1	270	15	5	0	73.8	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000046658	Zfp316	ENSMUST00000197349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046658	Zfp316	ENSMUST00000161448	ENSMUSP00000125416	TRANSLATION	protein_coding	-	CCDS19838.2	1	1017	59	1.2	0.5	357.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046658	Zfp316	ENSMUST00000051665	ENSMUSP00000059418	TRANSLATION	protein_coding	-	CCDS19838.2	1	1017	59	1.2	0.5	357.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029410	Ppef2	ENSMUST00000201130	ENSMUSP00000144157	TRANSLATION	protein_coding	-	CCDS39151.1	1	757	11	5.82	1.5	140.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029410	Ppef2	ENSMUST00000031359	ENSMUSP00000031359	TRANSLATION	protein_coding	-	CCDS39151.1	1	757	11	5.82	1.5	140.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029410	Ppef2	ENSMUST00000201236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029153	Ociad2	ENSMUST00000200776	ENSMUSP00000143984	TRANSLATION	protein_coding	-	-	3	41	0	0	0	33	0	-4,-7	-	-	0.672	MINOR
ENSMUSG00000029153	Ociad2	ENSMUST00000200821	ENSMUSP00000144201	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	80.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029153	Ociad2	ENSMUST00000200830	ENSMUSP00000144072	TRANSLATION	protein_coding	-	-	3	92	0	0	3.6	69.6	0	-4,-7	-	-	4.068	MINOR
ENSMUSG00000029153	Ociad2	ENSMUST00000202012	ENSMUSP00000144293	TRANSLATION	protein_coding	-	-	5	92	0	0	3.6	69.6	0	-4,-7	-	-	4.068	MINOR
ENSMUSG00000029153	Ociad2	ENSMUST00000087195	ENSMUSP00000084445	TRANSLATION	protein_coding	-	CCDS19340.1	1	154	0	0	7.5	121.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029153	Ociad2	ENSMUST00000201908	ENSMUSP00000144012	TRANSLATION	protein_coding	-	CCDS80301.1	2	103	0	0	2.9	83.9	0	-4,-7	-	-	4.602	MINOR
ENSMUSG00000029268	Ugt2a2	ENSMUST00000144144	ENSMUSP00000114842	TRANSLATION	protein_coding	-	-	2	280	15	3.4	0	559.7	2	-4,-5	-	-	10.668	MINOR
ENSMUSG00000029268	Ugt2a2	ENSMUST00000079811	ENSMUSP00000078740	TRANSLATION	protein_coding	-	CCDS19390.1	1	528	17	3.375	0.5	768.7	2	3,-2	-	-	17.952	PRINCIPAL:1
ENSMUSG00000029221	Slc30a9	ENSMUST00000159907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029221	Slc30a9	ENSMUST00000162372	ENSMUSP00000124047	TRANSLATION	protein_coding	-	CCDS39103.1	1	567	0	6.075	1.5	109.6	5	-2,2	-	-	12	PRINCIPAL:3
ENSMUSG00000029221	Slc30a9	ENSMUST00000201173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029221	Slc30a9	ENSMUST00000200734	ENSMUSP00000144546	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029221	Slc30a9	ENSMUST00000202770	ENSMUSP00000144579	TRANSLATION	protein_coding	start/stop	-	3	142	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029221	Slc30a9	ENSMUST00000113676	ENSMUSP00000109306	TRANSLATION	protein_coding	-	CCDS80294.1	1	547	0	6.075	0.5	109.6	5	-2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000029221	Slc30a9	ENSMUST00000161169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029221	Slc30a9	ENSMUST00000202521	ENSMUSP00000144067	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000016128	Stard13	ENSMUST00000129088	ENSMUSP00000116705	TRANSLATION	protein_coding	stop	-	3	129	0	1.7	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000016128	Stard13	ENSMUST00000202385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016128	Stard13	ENSMUST00000062015	ENSMUSP00000053232	TRANSLATION	protein_coding	-	CCDS51710.1	1	1132	0	10.028	1.5	283.8	0	-4,-6	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000016128	Stard13	ENSMUST00000201680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016128	Stard13	ENSMUST00000126770	ENSMUSP00000122468	TRANSLATION	protein_coding	stop	-	3	111	0	2.028	0	26	0	-4,0	-	-	-1	MINOR
ENSMUSG00000016128	Stard13	ENSMUST00000202866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016128	Stard13	ENSMUST00000110483	ENSMUSP00000106109	TRANSLATION	protein_coding	-	CCDS19890.1	1	1113	0	10.028	3.9	283.8	0	-4,-6	-	-	13	PRINCIPAL:3
ENSMUSG00000016128	Stard13	ENSMUST00000202111	ENSMUSP00000144056	TRANSLATION	protein_coding	-	-	5	995	0	8.198	2.4	257.8	0	-4,-5	-	-	7.263	MINOR
ENSMUSG00000016128	Stard13	ENSMUST00000146814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016128	Stard13	ENSMUST00000141117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042002	Foxn4	ENSMUST00000044790	ENSMUSP00000047951	TRANSLATION	protein_coding	-	CCDS19562.1	1	521	0	1.9	0.5	107.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042002	Foxn4	ENSMUST00000147953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042002	Foxn4	ENSMUST00000144050	ENSMUSP00000126361	TRANSLATION	protein_coding	stop	-	5	141	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042002	Foxn4	ENSMUST00000129530	ENSMUSP00000126256	TRANSLATION	nonsense_mediated_decay	start	-	5	136	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094043	Gm7971	ENSMUST00000086950	ENSMUSP00000084169	TRANSLATION	protein_coding	-	-	5	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000029094	Afap1	ENSMUST00000064571	ENSMUSP00000067779	TRANSLATION	protein_coding	-	CCDS19236.1	1	731	0	2.92	5.1	90.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000029094	Afap1	ENSMUST00000146300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029094	Afap1	ENSMUST00000141824	ENSMUSP00000119364	TRANSLATION	protein_coding	stop	-	2	627	0	2.92	0	90.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029094	Afap1	ENSMUST00000201482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029094	Afap1	ENSMUST00000212374	ENSMUSP00000148414	TRANSLATION	protein_coding	start/stop	-	3	167	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000150193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029217	Tec	ENSMUST00000155342	ENSMUSP00000118980	TRANSLATION	nonsense_mediated_decay	start	-	2	68	5	1	0	53.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000138842	ENSMUSP00000120155	TRANSLATION	nonsense_mediated_decay	-	-	1	100	13	2	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000149533	ENSMUSP00000123258	TRANSLATION	nonsense_mediated_decay	-	-	1	100	13	2	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000202547	ENSMUSP00000144458	TRANSLATION	protein_coding	stop	-	3	44	12	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000126481	ENSMUSP00000123606	TRANSLATION	nonsense_mediated_decay	-	-	5	184	18	4	0	118.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000073843	ENSMUSP00000073509	TRANSLATION	protein_coding	-	CCDS51515.1	1	608	35	13.6	0.5	547.2	0	-4,-5	-	-	16.104	MINOR
ENSMUSG00000029217	Tec	ENSMUST00000113594	ENSMUSP00000109224	TRANSLATION	protein_coding	-	CCDS51516.1	1	630	35	14.2	7.6	558.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029217	Tec	ENSMUST00000071944	ENSMUSP00000071836	TRANSLATION	protein_coding	-	CCDS51516.1	1	630	35	14.2	7.6	558.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036435	Exoc1	ENSMUST00000049469	ENSMUSP00000046719	TRANSLATION	protein_coding	-	CCDS71608.1	1	879	0	0	10.6	704.5	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000036435	Exoc1	ENSMUST00000132807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000150829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000141884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000202151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000131470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036435	Exoc1	ENSMUST00000087133	ENSMUSP00000084373	TRANSLATION	protein_coding	-	CCDS71607.1	1	894	0	0	10.6	701.8	0	-4,-5	-	-	8.838	ALTERNATIVE:1
ENSMUSG00000036435	Exoc1	ENSMUST00000143489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000113493	ENSMUSP00000109121	TRANSLATION	protein_coding	-	CCDS39117.1	1	901	0	0	9.4	701.8	0	-4,-5	-	-	8.463	PRINCIPAL:3
ENSMUSG00000036435	Exoc1	ENSMUST00000143736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000137018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036435	Exoc1	ENSMUST00000134521	ENSMUSP00000121784	TRANSLATION	protein_coding	start/stop	-	3	123	0	0	0	94.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029449	Rhof	ENSMUST00000186469	ENSMUSP00000140177	TRANSLATION	protein_coding	-	CCDS39263.1	1	211	19	4.8	5.1	167.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029449	Rhof	ENSMUST00000031401	ENSMUSP00000031401	TRANSLATION	protein_coding	-	CCDS39263.1	1	211	19	4.8	5.1	167.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029449	Rhof	ENSMUST00000162208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029449	Rhof	ENSMUST00000160479	ENSMUSP00000124866	TRANSLATION	nonsense_mediated_decay	-	-	1	211	19	4.8	5.1	167.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004815	Dgkq	ENSMUST00000132179	ENSMUSP00000118466	TRANSLATION	nonsense_mediated_decay	-	-	5	257	10	1.42	0	38.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004815	Dgkq	ENSMUST00000153365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000156964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000153238	ENSMUSP00000118065	TRANSLATION	nonsense_mediated_decay	-	-	5	257	10	1.42	0	38.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004815	Dgkq	ENSMUST00000053913	ENSMUSP00000057859	TRANSLATION	protein_coding	-	CCDS19515.1	1	934	21	4.02	1.5	376.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000004815	Dgkq	ENSMUST00000139598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000144624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000145917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000139169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004815	Dgkq	ENSMUST00000132708	ENSMUSP00000122837	TRANSLATION	nonsense_mediated_decay	-	-	5	169	4	1.02	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004815	Dgkq	ENSMUST00000123669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029189	Sel1l3	ENSMUST00000196550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029189	Sel1l3	ENSMUST00000196516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029189	Sel1l3	ENSMUST00000199919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029189	Sel1l3	ENSMUST00000196435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029189	Sel1l3	ENSMUST00000031090	ENSMUSP00000031090	TRANSLATION	protein_coding	-	CCDS51501.1	1	1137	0	4.46	2.7	78.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029649	Pomp	ENSMUST00000202621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029649	Pomp	ENSMUST00000031654	ENSMUSP00000031654	TRANSLATION	protein_coding	-	CCDS39402.1	1	141	0	0	16.3	129.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000029649	Pomp	ENSMUST00000201120	ENSMUSP00000144196	TRANSLATION	protein_coding	-	-	1	119	0	0	0	65.7	0	-4,-5	-	-	2.178	MINOR
ENSMUSG00000029649	Pomp	ENSMUST00000201376	ENSMUSP00000144685	TRANSLATION	protein_coding	-	-	3	94	0	0	0	65.8	0	-4,-5	-	-	2.184	MINOR
ENSMUSG00000029649	Pomp	ENSMUST00000202608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029649	Pomp	ENSMUST00000202222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042184	1700069L16Rik	ENSMUST00000162388	ENSMUSP00000124273	TRANSLATION	protein_coding	-	-	1	82	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000042184	1700069L16Rik	ENSMUST00000047891	ENSMUSP00000047454	TRANSLATION	protein_coding	-	-	2	109	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000042184	1700069L16Rik	ENSMUST00000159233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043635	Adamts3	ENSMUST00000163159	ENSMUSP00000132219	TRANSLATION	protein_coding	-	CCDS51542.1	1	1204	11	7.815	1.5	373.8	0	0,-3	-	-	16.428	MINOR
ENSMUSG00000043635	Adamts3	ENSMUST00000198151	ENSMUSP00000142771	TRANSLATION	protein_coding	-	-	1	228	0	0	0	95	0	0,-3	-	-	0	MINOR
ENSMUSG00000043635	Adamts3	ENSMUST00000196507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043635	Adamts3	ENSMUST00000061427	ENSMUSP00000058552	TRANSLATION	protein_coding	-	CCDS39140.1	1	1203	11	7.95	1.5	395.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029433	Diablo	ENSMUST00000125652	ENSMUSP00000115045	TRANSLATION	nonsense_mediated_decay	-	-	1	237	0	5.41	7.5	342	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000111586	ENSMUSP00000107213	TRANSLATION	protein_coding	-	-	5	174	0	3.41	0	255.8	0	-4,0	-	-	2.826	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000031385	ENSMUSP00000031385	TRANSLATION	protein_coding	-	-	2	174	0	3.41	0	259.5	0	-4,0	-	-	3.048	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000145152	ENSMUSP00000143617	TRANSLATION	protein_coding	-	-	1	157	0	2.33	0	198.6	0	-4,0	-	-	0	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000125047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029433	Diablo	ENSMUST00000200247	ENSMUSP00000143673	TRANSLATION	protein_coding	-	-	5	116	0	2.66	0	192.9	0	-4,-6	-	-	0.498	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000139398	ENSMUSP00000143485	TRANSLATION	nonsense_mediated_decay	-	-	1	157	0	2.33	0	198.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029433	Diablo	ENSMUST00000111587	ENSMUSP00000107214	TRANSLATION	protein_coding	-	CCDS39270.1	1	237	0	5.41	7.5	342	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000029433	Diablo	ENSMUST00000149334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070933	Speer4d	ENSMUST00000119100	ENSMUSP00000113289	TRANSLATION	protein_coding	-	-	2	160	0	0	0	37.6	0	-4,-5	-	-	2.316	MINOR
ENSMUSG00000070933	Speer4d	ENSMUST00000095006	ENSMUSP00000092615	TRANSLATION	protein_coding	-	CCDS19095.1	1	212	0	0	0.5	97.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000104633	Gm42421	ENSMUST00000172367	ENSMUSP00000132104	TRANSLATION	protein_coding,RT	start	-	3	166	0	1.86	0	46.9	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000029193	Cckar	ENSMUST00000031093	ENSMUSP00000031093	TRANSLATION	protein_coding	-	CCDS19293.1	1	436	0	4.44	0.5	308.3	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029193	Cckar	ENSMUST00000202946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029193	Cckar	ENSMUST00000200691	ENSMUSP00000144103	TRANSLATION	protein_coding	-	CCDS84881.1	1	365	0	2.64	0.5	201.2	6	1,-3	-	-	2.4	MINOR
ENSMUSG00000053178	Mterf1b	ENSMUST00000177258	ENSMUSP00000135408	TRANSLATION	protein_coding	-	CCDS39004.2	1	381	0	1	0.5	263.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000094719	Gm5108	ENSMUST00000201736	-	NO_TRANSLATION	antisense
ENSMUSG00000094719	Gm5108	ENSMUST00000201798	-	NO_TRANSLATION	antisense
ENSMUSG00000094719	Gm5108	ENSMUST00000202730	-	NO_TRANSLATION	antisense
ENSMUSG00000094719	Gm5108	ENSMUST00000177891	ENSMUSP00000137034	TRANSLATION	protein_coding	-	CCDS57348.1	1	101	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000101678	Gm29609	ENSMUST00000136581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101678	Gm29609	ENSMUST00000101411	ENSMUSP00000098957	TRANSLATION	protein_coding,RT	-	-	2	907	0	0	0	15.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000000149	Gna12	ENSMUST00000000153	ENSMUSP00000000153	TRANSLATION	protein_coding	-	CCDS19825.1	1	379	24	3.9	7.2	348.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000000149	Gna12	ENSMUST00000198447	ENSMUSP00000143414	TRANSLATION	protein_coding	start	-	5	316	22	3	0	293.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029345	Tfip11	ENSMUST00000198238	ENSMUSP00000142844	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	64.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029345	Tfip11	ENSMUST00000129528	ENSMUSP00000115225	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	72.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029345	Tfip11	ENSMUST00000031288	ENSMUSP00000031288	TRANSLATION	protein_coding	-	CCDS19539.1	1	838	0	0	7.5	496.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029345	Tfip11	ENSMUST00000126736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033316	Galnt9	ENSMUST00000040001	ENSMUSP00000038633	TRANSLATION	protein_coding	-	CCDS51610.1	1	604	16	7.09	14.5	158.3	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033316	Galnt9	ENSMUST00000200404	ENSMUSP00000143647	TRANSLATION	nonsense_mediated_decay	-	-	1	137	3	2.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033316	Galnt9	ENSMUST00000165856	ENSMUSP00000133111	TRANSLATION	protein_coding	-	CCDS51611.1	1	237	3	2.56	2.7	73.4	0	-4,-5	-	-	1.41	MINOR
ENSMUSG00000029613	Eif2ak1	ENSMUST00000100487	ENSMUSP00000098056	TRANSLATION	protein_coding	-	CCDS84994.1	1	619	17	3.89	0.5	159.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029613	Eif2ak1	ENSMUST00000154767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029613	Eif2ak1	ENSMUST00000140013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036817	Sun1	ENSMUST00000128817	ENSMUSP00000119587	TRANSLATION	protein_coding	start/stop	-	5	258	0	1.85	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000110882	ENSMUSP00000106506	TRANSLATION	protein_coding	-	CCDS57398.1	5	757	4	6.1	1.5	480.8	3	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000036817	Sun1	ENSMUST00000127045	ENSMUSP00000123211	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000135926	ENSMUSP00000114488	TRANSLATION	protein_coding	start/stop	-	5	256	4	0	0	133.7	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000078690	ENSMUSP00000077756	TRANSLATION	protein_coding	-	CCDS57396.1	5	849	4	6.1	0.5	474.9	3	-4,-5	-	-	15.646	ALTERNATIVE:2
ENSMUSG00000036817	Sun1	ENSMUST00000110883	ENSMUSP00000106507	TRANSLATION	protein_coding	-	CCDS57397.1	1	790	4	6.1	0.5	475.4	3	-4,-5	-	-	15.676	ALTERNATIVE:2
ENSMUSG00000036817	Sun1	ENSMUST00000153469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036817	Sun1	ENSMUST00000100517	ENSMUSP00000098086	TRANSLATION	protein_coding	-	-	1	239	4	0	0	238.3	0	-4,-5	-	-	4	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000110884	ENSMUSP00000106508	TRANSLATION	protein_coding	-	CCDS57395.1	1	876	4	6.1	0.5	473.3	3	-4,-5	-	-	15.55	ALTERNATIVE:2
ENSMUSG00000036817	Sun1	ENSMUST00000058716	ENSMUSP00000056655	TRANSLATION	protein_coding	-	CCDS19804.1	1	913	4	6.1	1.5	472.6	3	-4,-5	-	-	15.508	PRINCIPAL:3
ENSMUSG00000036817	Sun1	ENSMUST00000148772	ENSMUSP00000114869	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	77.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000136311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036817	Sun1	ENSMUST00000129079	ENSMUSP00000119582	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	62.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000143562	ENSMUSP00000116364	TRANSLATION	protein_coding	stop	-	5	158	0	0	0	134.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000126108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036817	Sun1	ENSMUST00000142473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036817	Sun1	ENSMUST00000127310	ENSMUSP00000114514	TRANSLATION	nonsense_mediated_decay	start	-	3	117	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000123414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036817	Sun1	ENSMUST00000146715	ENSMUSP00000117679	TRANSLATION	protein_coding	stop	-	5	160	0	0	0	139.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036817	Sun1	ENSMUST00000135720	ENSMUSP00000122785	TRANSLATION	protein_coding	start/stop	-	2	197	4	0	0	189.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000061906	Ugt2b38	ENSMUST00000072818	ENSMUSP00000072598	TRANSLATION	protein_coding	-	CCDS19388.1	1	530	15	3.8	1.5	839.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029377	Ereg	ENSMUST00000031324	ENSMUSP00000031324	TRANSLATION	protein_coding	-	CCDS19420.1	1	162	0	2.35	1.5	0	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000019494	Cops6	ENSMUST00000110951	ENSMUSP00000106576	TRANSLATION	protein_coding	-	-	1	297	0	8	4.7	193.4	0	-4,-6	-	-	11.5	ALTERNATIVE:1
ENSMUSG00000019494	Cops6	ENSMUST00000132639	ENSMUSP00000121554	TRANSLATION	protein_coding	start	-	5	122	0	3	0	77.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019494	Cops6	ENSMUST00000127881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019494	Cops6	ENSMUST00000154867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019494	Cops6	ENSMUST00000019638	ENSMUSP00000019638	TRANSLATION	protein_coding	-	CCDS19792.1	1	324	0	8.75	0.5	193.4	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000041890	Git2	ENSMUST00000112185	ENSMUSP00000107803	TRANSLATION	protein_coding	-	CCDS19570.2	1	708	4	8.54	7.5	398.3	0	-4,-5	-	-	10.054	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000112183	ENSMUSP00000107801	TRANSLATION	protein_coding	-	-	5	681	4	8.64	7.5	398.3	0	-4,-5	-	-	10.252	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000130925	ENSMUSP00000115185	TRANSLATION	protein_coding	start/stop	-	3	251	0	1	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000201442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041890	Git2	ENSMUST00000131993	ENSMUSP00000118812	TRANSLATION	protein_coding	start/stop	-	3	248	0	3.6	0	133.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000146044	ENSMUSP00000115988	TRANSLATION	protein_coding	start	-	3	311	0	4.25	0	256.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000153756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041890	Git2	ENSMUST00000202581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041890	Git2	ENSMUST00000144191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041890	Git2	ENSMUST00000155908	ENSMUSP00000122302	TRANSLATION	protein_coding	-	-	5	631	4	9.64	4.8	448.3	0	-4,-5	-	-	14.005	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000135793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041890	Git2	ENSMUST00000178440	ENSMUSP00000136796	TRANSLATION	protein_coding	-	-	5	680	4	8.54	7.5	398.3	0	-4,-5	-	-	10.054	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000133096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041890	Git2	ENSMUST00000131016	ENSMUSP00000116722	TRANSLATION	protein_coding	stop	-	3	201	2	4.04	0	100	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041890	Git2	ENSMUST00000086564	ENSMUSP00000083754	TRANSLATION	protein_coding	-	CCDS84939.1	5	759	4	10.14	7.5	494.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000041890	Git2	ENSMUST00000131582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041890	Git2	ENSMUST00000043283	ENSMUSP00000039718	TRANSLATION	protein_coding	-	CCDS39223.1	1	679	4	8.64	7.5	398.3	0	-4,-5	-	-	10.252	MINOR
ENSMUSG00000029423	Piwil1	ENSMUST00000200192	ENSMUSP00000142807	TRANSLATION	protein_coding	stop	-	1	493	0	7	0	224	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029423	Piwil1	ENSMUST00000195959	ENSMUSP00000142386	TRANSLATION	protein_coding	-	-	1	835	7	14.132	0	546.3	0	-4,-1	-	-	13.308	MINOR
ENSMUSG00000029423	Piwil1	ENSMUST00000086056	ENSMUSP00000083222	TRANSLATION	protein_coding	-	CCDS19690.1	1	862	8	15	1.5	583.1	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046079	Lrrc8d	ENSMUST00000127686	ENSMUSP00000117072	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	71.1	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000046079	Lrrc8d	ENSMUST00000140081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046079	Lrrc8d	ENSMUST00000154807	ENSMUSP00000114662	TRANSLATION	protein_coding	stop	-	1	93	0	0	0	111.4	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000046079	Lrrc8d	ENSMUST00000120847	ENSMUSP00000113603	TRANSLATION	protein_coding	-	CCDS19494.1	1	859	0	0.42	7.6	601.7	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000046079	Lrrc8d	ENSMUST00000156630	ENSMUSP00000116346	TRANSLATION	protein_coding	stop	-	5	37	0	0	0	63.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046079	Lrrc8d	ENSMUST00000135776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046079	Lrrc8d	ENSMUST00000060531	ENSMUSP00000057293	TRANSLATION	protein_coding	-	CCDS19494.1	1	859	0	0.42	7.6	601.7	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000046079	Lrrc8d	ENSMUST00000149831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046079	Lrrc8d	ENSMUST00000134605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046079	Lrrc8d	ENSMUST00000140608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029521	Chek2	ENSMUST00000066160	ENSMUSP00000066679	TRANSLATION	protein_coding	-	CCDS19533.1	1	546	18	12.59	1.5	301.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029521	Chek2	ENSMUST00000200630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029521	Chek2	ENSMUST00000198373	ENSMUSP00000142506	TRANSLATION	protein_coding	stop	-	3	42	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029521	Chek2	ENSMUST00000196650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029521	Chek2	ENSMUST00000199937	ENSMUSP00000143558	TRANSLATION	nonsense_mediated_decay	-	-	1	207	0	3.4	0	48.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029521	Chek2	ENSMUST00000200172	ENSMUSP00000142475	TRANSLATION	protein_coding	stop	-	2	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007987	Ift22	ENSMUST00000200054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007987	Ift22	ENSMUST00000200153	ENSMUSP00000142389	TRANSLATION	protein_coding	-	-	1	176	22	2.54	0	55.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000007987	Ift22	ENSMUST00000199101	ENSMUSP00000143017	TRANSLATION	protein_coding	stop	-	5	155	20	1.98	3.6	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007987	Ift22	ENSMUST00000008131	ENSMUSP00000008131	TRANSLATION	protein_coding	start	-	5	97	15	1.49	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007987	Ift22	ENSMUST00000200157	ENSMUSP00000143488	TRANSLATION	protein_coding	-	CCDS19756.1	1	185	22	2.54	11.6	55.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054720	Lrrc8c	ENSMUST00000153955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054720	Lrrc8c	ENSMUST00000153754	ENSMUSP00000114899	TRANSLATION	protein_coding	stop	-	5	170	0	0	0	278.9	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000054720	Lrrc8c	ENSMUST00000067924	ENSMUSP00000066015	TRANSLATION	protein_coding	-	CCDS19493.1	1	803	0	0.4	9.5	538.2	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000054720	Lrrc8c	ENSMUST00000150981	ENSMUSP00000122573	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	53.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034211	Mrps17	ENSMUST00000118420	ENSMUSP00000112993	TRANSLATION	protein_coding	-	CCDS19697.1	2	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000119604	ENSMUSP00000114012	TRANSLATION	protein_coding	-	CCDS19697.1	1	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000136108	ENSMUSP00000122093	TRANSLATION	protein_coding	stop	-	3	87	0	2.66	0	60.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034211	Mrps17	ENSMUST00000119576	ENSMUSP00000112779	TRANSLATION	protein_coding	-	CCDS19697.1	2	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000199999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034211	Mrps17	ENSMUST00000042191	ENSMUSP00000040281	TRANSLATION	protein_coding	-	CCDS19697.1	1	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000154358	ENSMUSP00000115189	TRANSLATION	protein_coding	stop	-	5	75	0	2.33	0	52.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034211	Mrps17	ENSMUST00000121813	ENSMUSP00000114059	TRANSLATION	protein_coding	-	CCDS19697.1	1	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000138812	ENSMUSP00000115097	TRANSLATION	protein_coding	stop	-	1	30	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034211	Mrps17	ENSMUST00000119985	ENSMUSP00000112762	TRANSLATION	protein_coding	-	CCDS19697.1	2	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034211	Mrps17	ENSMUST00000121339	ENSMUSP00000114125	TRANSLATION	protein_coding	-	CCDS19697.1	1	120	0	3.83	0.5	60.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000066900	Suds3	ENSMUST00000166397	ENSMUSP00000130535	TRANSLATION	protein_coding	-	CCDS51631.1	1	332	0	2.08	1.5	0	0	-2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000066900	Suds3	ENSMUST00000202713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066900	Suds3	ENSMUST00000086471	ENSMUSP00000083662	TRANSLATION	protein_coding	-	CCDS39232.1	1	328	0	2.08	0.5	0	0	-2,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000066900	Suds3	ENSMUST00000200684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066900	Suds3	ENSMUST00000202684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066900	Suds3	ENSMUST00000201287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000113373	Jakmip1	ENSMUST00000212997	ENSMUSP00000148621	TRANSLATION	protein_coding	-	-	5	45	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056531	Ccdc18	ENSMUST00000197718	ENSMUSP00000142963	TRANSLATION	nonsense_mediated_decay	-	-	1	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056531	Ccdc18	ENSMUST00000047677	ENSMUSP00000036507	TRANSLATION	protein_coding	-	CCDS39202.1	1	1455	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056531	Ccdc18	ENSMUST00000200463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056531	Ccdc18	ENSMUST00000195973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046959	Slc26a1	ENSMUST00000163328	ENSMUSP00000131282	TRANSLATION	protein_coding	-	CCDS19517.1	1	704	0	0.8	1.5	532.7	11	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000046959	Slc26a1	ENSMUST00000136227	ENSMUSP00000116540	TRANSLATION	protein_coding	stop	-	1	416	0	0.4	0	358.9	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000046959	Slc26a1	ENSMUST00000119270	ENSMUSP00000113185	TRANSLATION	protein_coding	-	CCDS80355.1	1	720	0	0.8	0.5	532.7	11	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000046959	Slc26a1	ENSMUST00000051757	ENSMUSP00000051561	TRANSLATION	protein_coding	-	CCDS19517.1	1	704	0	0.8	1.5	532.7	11	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000054892	Txk	ENSMUST00000169534	ENSMUSP00000129397	TRANSLATION	protein_coding	-	CCDS19334.1	1	527	19	9.7	3.9	437.1	0	-4,-7	-	-	19	PRINCIPAL:3
ENSMUSG00000054892	Txk	ENSMUST00000198798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054892	Txk	ENSMUST00000198970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054892	Txk	ENSMUST00000197313	ENSMUSP00000143476	TRANSLATION	protein_coding	-	CCDS80299.1	1	505	19	9.1	0.5	427.3	0	-4,-2	-	-	16.212	MINOR
ENSMUSG00000054892	Txk	ENSMUST00000198464	ENSMUSP00000143002	TRANSLATION	protein_coding	-	CCDS80298.1	1	473	19	9.7	0.5	437.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000054892	Txk	ENSMUST00000197923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054892	Txk	ENSMUST00000113604	ENSMUSP00000109234	TRANSLATION	protein_coding	-	CCDS51514.1	1	527	19	9.7	3.9	437.1	0	-4,-2	-	-	19	ALTERNATIVE:2
ENSMUSG00000054892	Txk	ENSMUST00000197843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034663	Bmp2k	ENSMUST00000112974	ENSMUSP00000108598	TRANSLATION	protein_coding	-	-	1	649	16	8.7	0	145.9	0	-4,-7	-	-	12	MINOR
ENSMUSG00000034663	Bmp2k	ENSMUST00000035635	ENSMUSP00000037970	TRANSLATION	protein_coding	-	CCDS39175.1	1	1138	16	8.7	0.5	522.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029625	Cpsf4	ENSMUST00000070487	ENSMUSP00000069243	TRANSLATION	protein_coding	-	CCDS19859.1	1	211	19	1	0.5	82.3	0	-4,-5	-	-	11.766	MINOR
ENSMUSG00000029625	Cpsf4	ENSMUST00000160629	ENSMUSP00000124899	TRANSLATION	protein_coding	-	CCDS71711.1	1	243	23	2	12.8	90.9	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000029625	Cpsf4	ENSMUST00000162244	ENSMUSP00000124966	TRANSLATION	protein_coding	-	CCDS71710.1	1	244	23	2	12.8	90.7	0	-4,-5	-	-	21.988	PRINCIPAL:4
ENSMUSG00000029625	Cpsf4	ENSMUST00000160437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029625	Cpsf4	ENSMUST00000160422	ENSMUSP00000125019	TRANSLATION	protein_coding	-	-	5	269	23	2	11	90.9	0	-4,-5	-	-	21.388	ALTERNATIVE:1
ENSMUSG00000029625	Cpsf4	ENSMUST00000160762	ENSMUSP00000125640	TRANSLATION	protein_coding	start	-	5	208	19	2	0	63.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029625	Cpsf4	ENSMUST00000160574	ENSMUSP00000137910	TRANSLATION	nonsense_mediated_decay	-	-	5	62	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094105	Gm8922	ENSMUST00000170057	ENSMUSP00000132013	TRANSLATION	protein_coding	-	-	5	199	0	0	0.5	81.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094105	Gm8922	ENSMUST00000178989	ENSMUSP00000137032	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	81.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061937	Csn1s2a	ENSMUST00000199200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061937	Csn1s2a	ENSMUST00000200210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061937	Csn1s2a	ENSMUST00000196749	ENSMUSP00000143715	TRANSLATION	protein_coding	-	CCDS80318.1	1	183	0	0	1.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000061937	Csn1s2a	ENSMUST00000200322	ENSMUSP00000142901	TRANSLATION	protein_coding	-	CCDS84901.1	2	176	0	0	0.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000061937	Csn1s2a	ENSMUST00000200350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061937	Csn1s2a	ENSMUST00000197544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061937	Csn1s2a	ENSMUST00000197019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061937	Csn1s2a	ENSMUST00000076379	ENSMUSP00000075716	TRANSLATION	protein_coding	-	CCDS39132.1	1	184	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000061937	Csn1s2a	ENSMUST00000196585	ENSMUSP00000143515	TRANSLATION	protein_coding	-	CCDS84900.1	3	169	0	0	0.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000061937	Csn1s2a	ENSMUST00000200200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032959	Pebp1	ENSMUST00000036951	ENSMUSP00000048425	TRANSLATION	protein_coding	-	CCDS39234.1	1	187	12	4	12.8	0	0	-4,-5	-	-	15.46	PRINCIPAL:1
ENSMUSG00000032959	Pebp1	ENSMUST00000111973	ENSMUSP00000107604	TRANSLATION	protein_coding	-	-	3	209	12	4.27	0	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000032959	Pebp1	ENSMUST00000139913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032959	Pebp1	ENSMUST00000142428	ENSMUSP00000116186	TRANSLATION	nonsense_mediated_decay	-	-	5	136	8	3.315	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042647	Acad12	ENSMUST00000131338	ENSMUSP00000121904	TRANSLATION	protein_coding	start	-	1	182	1	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042647	Acad12	ENSMUST00000197916	ENSMUSP00000142370	TRANSLATION	nonsense_mediated_decay	-	-	3	67	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000042647	Acad12	ENSMUST00000041252	ENSMUSP00000046497	TRANSLATION	protein_coding	-	CCDS51642.1	1	555	26	7.94	0.5	204.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000042647	Acad12	ENSMUST00000111776	ENSMUSP00000107406	TRANSLATION	protein_coding	-	-	1	373	9	4.34	0	110.1	0	-4,0	-	-	0.342	MINOR
ENSMUSG00000042647	Acad12	ENSMUST00000197306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029437	Il31	ENSMUST00000198463	ENSMUSP00000142507	TRANSLATION	protein_coding	start	-	3	179	0	0	0	168.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000029437	Il31	ENSMUST00000199227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029437	Il31	ENSMUST00000031389	ENSMUSP00000031389	TRANSLATION	protein_coding	-	CCDS51645.1	1	163	0	0	0.5	168.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029437	Il31	ENSMUST00000198901	ENSMUSP00000143125	TRANSLATION	protein_coding	-	-	1	100	0	0	0	122.1	0	-4,-5	-	-	3.228	MINOR
ENSMUSG00000109572	Cfap99	ENSMUST00000207754	ENSMUSP00000146999	TRANSLATION	protein_coding	-	-	5	648	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000029624	Ptcd1	ENSMUST00000031628	ENSMUSP00000031628	TRANSLATION	protein_coding	-	CCDS19858.1	1	695	0	2.82	0.5	89.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029624	Ptcd1	ENSMUST00000161390	ENSMUSP00000125276	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059447	Hadhb	ENSMUST00000141236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059447	Hadhb	ENSMUST00000127364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059447	Hadhb	ENSMUST00000114786	ENSMUSP00000110434	TRANSLATION	protein_coding	-	CCDS39045.1	1	475	16	8.309	8.8	464.7	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000059447	Hadhb	ENSMUST00000026841	ENSMUSP00000026841	TRANSLATION	protein_coding	-	CCDS39045.1	1	475	16	8.309	8.8	464.7	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000059447	Hadhb	ENSMUST00000123980	ENSMUSP00000118296	TRANSLATION	protein_coding	stop	-	3	173	1	2.53	0	106.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000059447	Hadhb	ENSMUST00000133414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059447	Hadhb	ENSMUST00000122934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059447	Hadhb	ENSMUST00000197109	ENSMUSP00000142868	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000059447	Hadhb	ENSMUST00000114783	ENSMUSP00000110431	TRANSLATION	protein_coding	-	CCDS39045.1	1	475	16	8.309	8.8	464.7	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000046245	Pilra	ENSMUST00000197586	ENSMUSP00000142631	TRANSLATION	protein_coding	stop	-	2	94	0	1.6	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000046245	Pilra	ENSMUST00000130460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046245	Pilra	ENSMUST00000058897	ENSMUSP00000050313	TRANSLATION	protein_coding	-	CCDS19780.1	1	302	0	2.6	0.5	0	1	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000046245	Pilra	ENSMUST00000110980	ENSMUSP00000106608	TRANSLATION	protein_coding	-	-	2	299	0	2.6	0	0	1	0,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000046245	Pilra	ENSMUST00000199028	ENSMUSP00000142391	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000039178	Tbc1d19	ENSMUST00000202880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039178	Tbc1d19	ENSMUST00000201387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039178	Tbc1d19	ENSMUST00000037337	ENSMUSP00000040585	TRANSLATION	protein_coding	-	CCDS19294.1	1	526	0	0	9.6	48.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039178	Tbc1d19	ENSMUST00000202528	ENSMUSP00000143985	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039178	Tbc1d19	ENSMUST00000201116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039178	Tbc1d19	ENSMUST00000201958	ENSMUSP00000144558	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039178	Tbc1d19	ENSMUST00000202599	ENSMUSP00000144033	TRANSLATION	nonsense_mediated_decay	-	-	3	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039178	Tbc1d19	ENSMUST00000202695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039178	Tbc1d19	ENSMUST00000201727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029601	Iqcd	ENSMUST00000069259	ENSMUSP00000069167	TRANSLATION	protein_coding	-	-	1	425	0	0	0	22.3	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000029601	Iqcd	ENSMUST00000094391	ENSMUSP00000091955	TRANSLATION	protein_coding	-	CCDS19621.1	1	458	0	0	0.5	22.3	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000043388	Tmem130	ENSMUST00000197254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043388	Tmem130	ENSMUST00000061446	ENSMUSP00000061100	TRANSLATION	protein_coding	-	CCDS19851.1	1	419	0	0	0.5	32.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051498	Tlr6	ENSMUST00000062315	ENSMUSP00000062096	TRANSLATION	protein_coding	-	-	1	795	0	1.8	2.4	156	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051498	Tlr6	ENSMUST00000239485	ENSMUSP00000159286	TRANSLATION	protein_coding	-	CCDS19303.1	-	806	0	1.8	1.5	156	1	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000051498	Tlr6	ENSMUST00000201307	ENSMUSP00000143865	TRANSLATION	protein_coding	stop	-	1	102	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044221	Grsf1	ENSMUST00000130408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044221	Grsf1	ENSMUST00000153565	ENSMUSP00000123051	TRANSLATION	protein_coding	stop	-	5	137	0	4	0	42.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044221	Grsf1	ENSMUST00000113234	ENSMUSP00000108860	TRANSLATION	protein_coding	-	CCDS51540.1	1	362	0	8.25	5.1	42.9	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000044221	Grsf1	ENSMUST00000078945	ENSMUSP00000077972	TRANSLATION	protein_coding	-	CCDS19404.1	1	479	0	8.25	5.1	42.9	0	-3,-1	-	-	14	PRINCIPAL:3
ENSMUSG00000044221	Grsf1	ENSMUST00000150438	ENSMUSP00000115589	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044221	Grsf1	ENSMUST00000133532	ENSMUSP00000114732	TRANSLATION	protein_coding	stop	-	3	57	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044221	Grsf1	ENSMUST00000137725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029513	Prkab1	ENSMUST00000143146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029513	Prkab1	ENSMUST00000147343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029513	Prkab1	ENSMUST00000141018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029513	Prkab1	ENSMUST00000111999	ENSMUSP00000107630	TRANSLATION	protein_coding	-	CCDS19598.1	2	270	0	6.83	8.8	212.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000029513	Prkab1	ENSMUST00000133098	ENSMUSP00000138749	TRANSLATION	nonsense_mediated_decay	-	-	3	176	0	3	0	93	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029513	Prkab1	ENSMUST00000031486	ENSMUSP00000031486	TRANSLATION	protein_coding	-	CCDS19598.1	1	270	0	6.83	8.8	212.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000029513	Prkab1	ENSMUST00000143524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029513	Prkab1	ENSMUST00000152174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029513	Prkab1	ENSMUST00000148208	ENSMUSP00000138221	TRANSLATION	nonsense_mediated_decay	-	-	5	176	0	3	0	93	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025537	Phkg1	ENSMUST00000154495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025537	Phkg1	ENSMUST00000200832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025537	Phkg1	ENSMUST00000154932	ENSMUSP00000122040	TRANSLATION	protein_coding	stop	-	5	95	8	2.75	0	110.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025537	Phkg1	ENSMUST00000200922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025537	Phkg1	ENSMUST00000140667	ENSMUSP00000117510	TRANSLATION	protein_coding	stop	-	5	143	14	3.5	0	86.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025537	Phkg1	ENSMUST00000026617	ENSMUSP00000026617	TRANSLATION	protein_coding	-	CCDS19701.1	1	388	20	7.33	10.8	252.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000075593	Gal3st4	ENSMUST00000161279	ENSMUSP00000124841	TRANSLATION	protein_coding	-	CCDS19798.1	3	480	3	0	1.5	362.5	2	-3,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000075593	Gal3st4	ENSMUST00000161665	ENSMUSP00000124682	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	0	2	-3,-2	-	-	-1	MINOR
ENSMUSG00000075593	Gal3st4	ENSMUST00000161647	ENSMUSP00000125084	TRANSLATION	protein_coding	-	CCDS84982.1	1	475	3	0	1.5	362.5	2	-1,-7	-	-	9	ALTERNATIVE:2
ENSMUSG00000075593	Gal3st4	ENSMUST00000100530	ENSMUSP00000098099	TRANSLATION	protein_coding	-	CCDS19798.1	1	480	3	0	1.5	362.5	2	-3,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000075593	Gal3st4	ENSMUST00000162557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056493	Foxk1	ENSMUST00000072837	ENSMUSP00000072616	TRANSLATION	protein_coding	-	CCDS19826.1	1	719	0	2	1.5	181.3	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000056493	Foxk1	ENSMUST00000198422	ENSMUSP00000143450	TRANSLATION	protein_coding	-	-	3	181	0	0	0	37.2	0	-3,-4	-	-	0	MINOR
ENSMUSG00000037017	Zscan21	ENSMUST00000136425	ENSMUSP00000119570	TRANSLATION	protein_coding	stop	-	5	160	0	0.6	0	61.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037017	Zscan21	ENSMUST00000110959	ENSMUSP00000106584	TRANSLATION	protein_coding	-	CCDS19790.1	1	555	28	2.6	1.5	313.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000037017	Zscan21	ENSMUST00000110960	ENSMUSP00000106585	TRANSLATION	protein_coding	-	CCDS19790.1	1	555	28	2.6	1.5	313.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000037017	Zscan21	ENSMUST00000142185	ENSMUSP00000121495	TRANSLATION	protein_coding	start/stop	-	5	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037017	Zscan21	ENSMUST00000110961	ENSMUSP00000106586	TRANSLATION	protein_coding	-	CCDS19790.1	1	555	28	2.6	1.5	313.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000037017	Zscan21	ENSMUST00000080732	ENSMUSP00000079557	TRANSLATION	protein_coding	-	CCDS19790.1	1	555	28	2.6	1.5	313.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000037017	Zscan21	ENSMUST00000062350	ENSMUSP00000053430	TRANSLATION	protein_coding	-	CCDS19790.1	1	555	28	2.6	1.5	313.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000007415	Gatad1	ENSMUST00000119783	ENSMUSP00000113271	TRANSLATION	protein_coding	-	-	1	218	5	0	0	0	0	-4,-6	-	-	5	ALTERNATIVE:2
ENSMUSG00000007415	Gatad1	ENSMUST00000196304	ENSMUSP00000142480	TRANSLATION	protein_coding	-	-	3	54	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000007415	Gatad1	ENSMUST00000007559	ENSMUSP00000007559	TRANSLATION	protein_coding	-	CCDS19066.1	1	266	5	0	1.7	0	0	-4,-6	-	-	5	PRINCIPAL:2
ENSMUSG00000007415	Gatad1	ENSMUST00000140871	ENSMUSP00000122092	TRANSLATION	protein_coding	start	-	2	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029644	Pdx1	ENSMUST00000085591	ENSMUSP00000082729	TRANSLATION	protein_coding	-	CCDS39398.1	1	284	0	1	5.1	75.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000005220	Corin	ENSMUST00000177290	ENSMUSP00000135511	TRANSLATION	protein_coding	-	-	5	980	37	5.08	0	647.7	4	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000005220	Corin	ENSMUST00000167460	ENSMUSP00000127389	TRANSLATION	protein_coding	-	CCDS51513.1	1	1047	37	5.08	0.5	647.7	4	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000005220	Corin	ENSMUST00000176439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005220	Corin	ENSMUST00000005352	ENSMUSP00000005352	TRANSLATION	protein_coding	-	CCDS19330.1	1	1113	37	5.08	0.5	647.7	4	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000005220	Corin	ENSMUST00000176320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005220	Corin	ENSMUST00000175766	ENSMUSP00000135889	TRANSLATION	protein_coding	start	-	5	972	27	5.08	0	563.7	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000005220	Corin	ENSMUST00000176974	ENSMUSP00000135722	TRANSLATION	protein_coding	stop	-	5	1007	31	5.08	0	605.5	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000007907	Cabs1	ENSMUST00000008051	ENSMUSP00000008051	TRANSLATION	protein_coding	-	CCDS39136.1	1	391	0	0	0.5	626.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056035	Cyp3a11	ENSMUST00000199857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056035	Cyp3a11	ENSMUST00000035918	ENSMUSP00000037665	TRANSLATION	protein_coding	-	CCDS19865.1	1	504	31	11.1	5.1	450.9	0	0,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000063015	Ccni	ENSMUST00000201823	ENSMUSP00000143972	TRANSLATION	protein_coding	start/stop	-	3	148	0	2.45	0	79.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063015	Ccni	ENSMUST00000058550	ENSMUSP00000050189	TRANSLATION	protein_coding	-	CCDS19436.1	1	377	0	2.82	8.8	86.9	0	-4,-2	-	-	14.814	PRINCIPAL:1
ENSMUSG00000063015	Ccni	ENSMUST00000144514	ENSMUSP00000122434	TRANSLATION	protein_coding	stop	-	5	81	0	1.37	0	37.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063015	Ccni	ENSMUST00000123033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063015	Ccni	ENSMUST00000151568	ENSMUSP00000116224	TRANSLATION	protein_coding	stop	-	5	172	0	2.82	0	89.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037999	Arap2	ENSMUST00000160620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037999	Arap2	ENSMUST00000076623	ENSMUSP00000075924	TRANSLATION	protein_coding	-	CCDS51506.1	5	1703	4	11.235	0.5	449.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037999	Arap2	ENSMUST00000201373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037999	Arap2	ENSMUST00000160419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037999	Arap2	ENSMUST00000161911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037999	Arap2	ENSMUST00000200549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037999	Arap2	ENSMUST00000159470	ENSMUSP00000124743	TRANSLATION	protein_coding	stop	-	3	126	0	1	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029622	Arpc1b	ENSMUST00000138235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029622	Arpc1b	ENSMUST00000141602	ENSMUSP00000122340	TRANSLATION	protein_coding	stop	-	5	56	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029622	Arpc1b	ENSMUST00000136074	ENSMUSP00000115022	TRANSLATION	protein_coding	start/stop	-	3	232	0	3.91	0	18.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029622	Arpc1b	ENSMUST00000085679	ENSMUSP00000082822	TRANSLATION	protein_coding	-	CCDS19856.1	1	372	0	9.66	7.5	41.3	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000029622	Arpc1b	ENSMUST00000138900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029622	Arpc1b	ENSMUST00000126343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029622	Arpc1b	ENSMUST00000138922	ENSMUSP00000115515	TRANSLATION	protein_coding	start	-	5	105	0	2.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029622	Arpc1b	ENSMUST00000196111	ENSMUSP00000143438	TRANSLATION	protein_coding	-	-	1	376	0	9.66	7.5	41.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000029622	Arpc1b	ENSMUST00000144375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029622	Arpc1b	ENSMUST00000128229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029622	Arpc1b	ENSMUST00000129033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053765	Oas1f	ENSMUST00000057814	ENSMUSP00000056993	TRANSLATION	protein_coding	-	CCDS19628.1	1	364	10	5.45	0.5	262.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053765	Oas1f	ENSMUST00000123431	ENSMUSP00000114589	TRANSLATION	nonsense_mediated_decay	start	-	2	30	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094504	Gm5294	ENSMUST00000179205	ENSMUSP00000137099	TRANSLATION	protein_coding	-	CCDS57394.1	5	216	0	1.52	0.5	119.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061979	Rcc1l	ENSMUST00000156574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061979	Rcc1l	ENSMUST00000126113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061979	Rcc1l	ENSMUST00000076228	ENSMUSP00000075581	TRANSLATION	protein_coding	-	CCDS19718.1	1	461	0	5.88	1.5	159.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041147	Brca2	ENSMUST00000202003	ENSMUSP00000144676	TRANSLATION	protein_coding	stop	-	1	992	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041147	Brca2	ENSMUST00000202192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041147	Brca2	ENSMUST00000202975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000201226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000201149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041147	Brca2	ENSMUST00000201678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000202837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000202693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000202727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000202313	ENSMUSP00000144150	TRANSLATION	protein_coding	-	CCDS39411.1	1	3329	0	13	0.5	932.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041147	Brca2	ENSMUST00000201309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041147	Brca2	ENSMUST00000201165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041147	Brca2	ENSMUST00000044620	ENSMUSP00000038576	TRANSLATION	protein_coding	-	CCDS39411.1	5	3329	0	13	0.5	932.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041147	Brca2	ENSMUST00000200686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029135	Fosl2	ENSMUST00000201110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029135	Fosl2	ENSMUST00000031017	ENSMUSP00000031017	TRANSLATION	protein_coding	-	CCDS19190.1	1	326	0	1.2	7.5	35.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029135	Fosl2	ENSMUST00000202169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029560	Snx8	ENSMUST00000196130	ENSMUSP00000142390	TRANSLATION	protein_coding	-	-	1	411	0	3.87	5.8	73.9	0	-4,-7	-	-	13.796	PRINCIPAL:1
ENSMUSG00000029560	Snx8	ENSMUST00000197880	ENSMUSP00000142394	TRANSLATION	nonsense_mediated_decay	-	-	2	88	0	1.65	0	45.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029560	Snx8	ENSMUST00000196566	ENSMUSP00000142556	TRANSLATION	protein_coding	-	-	5	411	0	3.87	5.8	73.9	0	-4,-7	-	-	13.796	PRINCIPAL:1
ENSMUSG00000029560	Snx8	ENSMUST00000198945	ENSMUSP00000142866	TRANSLATION	protein_coding	stop	-	5	176	0	2.9	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029560	Snx8	ENSMUST00000196020	ENSMUSP00000142491	TRANSLATION	protein_coding	stop	-	3	75	0	1.75	0	36	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029560	Snx8	ENSMUST00000195982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029560	Snx8	ENSMUST00000031539	ENSMUSP00000031539	TRANSLATION	protein_coding	-	CCDS39356.1	1	459	0	3.87	1.5	73.9	0	-4,-6	-	-	12.004	MINOR
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000165250	ENSMUSP00000131673	TRANSLATION	protein_coding	-	-	5	163	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000202278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000201302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000201386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000201562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000202773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054598	9130230L23Rik	ENSMUST00000201351	ENSMUSP00000143918	TRANSLATION	protein_coding	-	-	1	163	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042817	Flt3	ENSMUST00000110549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042817	Flt3	ENSMUST00000049324	ENSMUSP00000039041	TRANSLATION	protein_coding	-	CCDS39400.1	1	1000	21	21.15	1.5	378.8	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000029134	Plb1	ENSMUST00000202886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029134	Plb1	ENSMUST00000202453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029134	Plb1	ENSMUST00000202687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029134	Plb1	ENSMUST00000201313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029134	Plb1	ENSMUST00000200878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029134	Plb1	ENSMUST00000101376	ENSMUSP00000098927	TRANSLATION	protein_coding	-	CCDS39060.1	5	1478	5	0	0.5	224.7	1	1,-2	-	-	11	PRINCIPAL:1
ENSMUSG00000029134	Plb1	ENSMUST00000202201	ENSMUSP00000144401	TRANSLATION	protein_coding	-	-	1	778	5	0	0	83.3	0	1,-2	-	-	5	MINOR
ENSMUSG00000029134	Plb1	ENSMUST00000202220	ENSMUSP00000144040	TRANSLATION	protein_coding	-	CCDS39060.1	5	1478	5	0	0.5	224.7	1	1,-2	-	-	11	PRINCIPAL:1
ENSMUSG00000029134	Plb1	ENSMUST00000201578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028777	Gnat3	ENSMUST00000030561	ENSMUSP00000030561	TRANSLATION	protein_coding	-	CCDS39017.1	1	354	24	7.5	12.8	414.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019178	Styxl1	ENSMUST00000177559	ENSMUSP00000135982	TRANSLATION	protein_coding	-	CCDS19745.2	5	321	8	4.032	1.5	99.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019178	Styxl1	ENSMUST00000178515	ENSMUSP00000137191	TRANSLATION	protein_coding	-	CCDS71679.1	1	177	8	4.032	0.5	76.1	0	-4,-5	-	-	16.59	MINOR
ENSMUSG00000019178	Styxl1	ENSMUST00000111162	ENSMUSP00000106792	TRANSLATION	protein_coding	-	CCDS71680.1	5	217	8	3	0.5	60.5	0	-4,-5	-	-	13.584	MINOR
ENSMUSG00000019178	Styxl1	ENSMUST00000111163	ENSMUSP00000106793	TRANSLATION	protein_coding	-	CCDS19745.2	1	321	8	4.032	1.5	99.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019178	Styxl1	ENSMUST00000142343	ENSMUSP00000136983	TRANSLATION	nonsense_mediated_decay	-	-	1	137	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019178	Styxl1	ENSMUST00000178796	ENSMUSP00000137481	TRANSLATION	protein_coding	stop	-	5	174	0	0.3	0	23.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019178	Styxl1	ENSMUST00000111164	ENSMUSP00000106794	TRANSLATION	protein_coding	-	CCDS19745.2	1	321	8	4.032	1.5	99.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019178	Styxl1	ENSMUST00000111161	ENSMUSP00000106791	TRANSLATION	protein_coding	-	CCDS71679.1	1	177	8	4.032	0.5	76.1	0	-4,-5	-	-	16.59	MINOR
ENSMUSG00000019178	Styxl1	ENSMUST00000053906	ENSMUSP00000051216	TRANSLATION	protein_coding	-	CCDS19745.2	1	321	8	4.032	1.5	99.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051950	B3glct	ENSMUST00000100404	ENSMUSP00000097972	TRANSLATION	protein_coding	-	CCDS39410.1	1	489	0	1.92	0.5	215.7	0	-1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051950	B3glct	ENSMUST00000201088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051950	B3glct	ENSMUST00000202302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000148	Brat1	ENSMUST00000110806	ENSMUSP00000106429	TRANSLATION	protein_coding	-	-	1	597	0	0	0	21.9	0	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000000148	Brat1	ENSMUST00000100505	ENSMUSP00000098074	TRANSLATION	protein_coding	-	CCDS71696.1	1	867	0	0	0.5	21.9	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000000148	Brat1	ENSMUST00000041588	ENSMUSP00000036016	TRANSLATION	protein_coding	-	CCDS19823.1	1	822	0	0	0.5	21.9	0	-2,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000000148	Brat1	ENSMUST00000153440	ENSMUSP00000114216	TRANSLATION	nonsense_mediated_decay	-	-	1	315	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000000148	Brat1	ENSMUST00000131905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000148	Brat1	ENSMUST00000124892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093574	Gm20671	ENSMUST00000144673	ENSMUSP00000124923	TRANSLATION	protein_coding,RT	start	-	5	576	0	0	0	275	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029522	Pla2g1b	ENSMUST00000031495	ENSMUSP00000031495	TRANSLATION	protein_coding	-	CCDS19592.1	1	146	15	3.75	7.9	128.5	0	3,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000029522	Pla2g1b	ENSMUST00000112071	ENSMUSP00000107702	TRANSLATION	protein_coding	-	-	1	82	9	1.66	0	52.2	0	3,-3	-	-	5.238	MINOR
ENSMUSG00000029522	Pla2g1b	ENSMUST00000145785	ENSMUSP00000138683	TRANSLATION	protein_coding	-	-	5	77	9	1.8	0	51.6	0	3,-3	-	-	5.484	MINOR
ENSMUSG00000029522	Pla2g1b	ENSMUST00000125568	ENSMUSP00000120743	TRANSLATION	protein_coding	stop	-	2	124	14	3	0	115.9	0	4,-2	-	-	-1	MINOR
ENSMUSG00000029522	Pla2g1b	ENSMUST00000202822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045102	Poln	ENSMUST00000042954	ENSMUSP00000036110	TRANSLATION	protein_coding	-	CCDS39067.1	1	866	10	17.2	1.5	410.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045102	Poln	ENSMUST00000202825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045102	Poln	ENSMUST00000202638	ENSMUSP00000143793	TRANSLATION	protein_coding	-	CCDS80263.1	1	822	10	16.2	0.5	219.2	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000045102	Poln	ENSMUST00000202741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045102	Poln	ENSMUST00000202027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045102	Poln	ENSMUST00000202409	ENSMUSP00000144578	TRANSLATION	protein_coding	-	CCDS80262.1	1	848	10	16.7	0.5	365.4	0	-4,-5	-	-	14.286	MINOR
ENSMUSG00000045102	Poln	ENSMUST00000201251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045102	Poln	ENSMUST00000202076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074011	Gm7682	ENSMUST00000098289	ENSMUSP00000095890	TRANSLATION	protein_coding	-	-	5	480	2	0	0.5	0	0	-4,-6	-	-	2	ALTERNATIVE:2
ENSMUSG00000074011	Gm7682	ENSMUST00000202916	ENSMUSP00000144247	TRANSLATION	protein_coding	-	-	5	481	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:5
ENSMUSG00000105835	Gm43552	ENSMUST00000196121	ENSMUSP00000143665	TRANSLATION	protein_coding,RT	-	-	3	29	0	0	2	42.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000070419	Cyp3a57	ENSMUST00000174696	ENSMUSP00000133600	TRANSLATION	nonsense_mediated_decay	-	-	5	149	6	3.5	0	71.3	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000070419	Cyp3a57	ENSMUST00000079268	ENSMUSP00000078251	TRANSLATION	protein_coding	-	CCDS39388.1	5	503	31	11.25	3.9	430.5	1	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000040274	Cdk6	ENSMUST00000197385	ENSMUSP00000143492	TRANSLATION	protein_coding	stop	-	2	82	9	1.75	0	43.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040274	Cdk6	ENSMUST00000165117	ENSMUSP00000126024	TRANSLATION	protein_coding	-	CCDS19062.1	1	326	19	7.25	11.1	231.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040274	Cdk6	ENSMUST00000199396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040274	Cdk6	ENSMUST00000197607	ENSMUSP00000142796	TRANSLATION	protein_coding	stop	-	3	23	2	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040274	Cdk6	ENSMUST00000199156	ENSMUSP00000143564	TRANSLATION	protein_coding	stop	-	5	29	5	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040274	Cdk6	ENSMUST00000042410	ENSMUSP00000037925	TRANSLATION	protein_coding	-	CCDS19062.1	1	326	19	7.25	11.1	231.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033615	Cplx1	ENSMUST00000129040	ENSMUSP00000118118	TRANSLATION	protein_coding	stop	-	3	76	0	1.75	0	83.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033615	Cplx1	ENSMUST00000046892	ENSMUSP00000038502	TRANSLATION	protein_coding	-	CCDS39206.1	1	134	0	1.75	21.5	145.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036599	Chst12	ENSMUST00000124142	ENSMUSP00000114835	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000036599	Chst12	ENSMUST00000043050	ENSMUSP00000041663	TRANSLATION	protein_coding	-	CCDS19820.1	1	419	0	0	4	215.4	1	-1,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000029597	Sds	ENSMUST00000201684	ENSMUSP00000143838	TRANSLATION	protein_coding	-	CCDS19619.1	5	327	16	6.83	5.1	251.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000029597	Sds	ENSMUST00000124978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029597	Sds	ENSMUST00000111898	ENSMUSP00000107529	TRANSLATION	protein_coding	stop	-	2	101	3	2.5	0	93.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029597	Sds	ENSMUST00000066540	ENSMUSP00000064849	TRANSLATION	protein_coding	-	CCDS19619.1	1	327	16	6.83	5.1	251.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000090688	Vmn2r12	ENSMUST00000095922	ENSMUSP00000093612	TRANSLATION	protein_coding	-	CCDS51598.1	5	831	4	2.92	0.5	365.3	0	1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000019295	Tmem129	ENSMUST00000019439	ENSMUSP00000019439	TRANSLATION	protein_coding	-	CCDS19206.1	1	362	7	0	8.8	474.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019295	Tmem129	ENSMUST00000200849	ENSMUSP00000144662	TRANSLATION	protein_coding	-	-	3	74	5	0	0	116.5	0	-4,-7	-	-	4.284	MINOR
ENSMUSG00000019295	Tmem129	ENSMUST00000140931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019295	Tmem129	ENSMUST00000125527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034855	Cxcl10	ENSMUST00000138169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034855	Cxcl10	ENSMUST00000201176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034855	Cxcl10	ENSMUST00000118006	ENSMUSP00000114134	TRANSLATION	protein_coding	-	-	1	93	0	2	0	51.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000034855	Cxcl10	ENSMUST00000038816	ENSMUSP00000047646	TRANSLATION	protein_coding	-	CCDS39153.1	1	98	0	2	4.1	51.6	0	4,-1	-	-	13	PRINCIPAL:2
ENSMUSG00000029136	Rbks	ENSMUST00000031018	ENSMUSP00000031018	TRANSLATION	protein_coding	-	CCDS19187.1	1	323	20	7.3	2.7	216.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029136	Rbks	ENSMUST00000202036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029136	Rbks	ENSMUST00000201744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072188	Gm10354	ENSMUST00000096953	ENSMUSP00000094716	TRANSLATION	protein_coding	-	CCDS59668.1	5	256	0	0	0.5	95	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000046808	Atp10d	ENSMUST00000094710	ENSMUSP00000142749	TRANSLATION	protein_coding	-	-	5	278	0	0	0	159.4	5	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000046808	Atp10d	ENSMUST00000126664	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000046808	Atp10d	ENSMUST00000169617	ENSMUSP00000143464	TRANSLATION	protein_coding	-	-	1	215	0	0	0	81	2	0,-3	-	-	1.296	MINOR
ENSMUSG00000046808	Atp10d	ENSMUST00000146393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046808	Atp10d	ENSMUST00000156937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046808	Atp10d	ENSMUST00000136350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054116	E130116L18Rik	ENSMUST00000066954	ENSMUSP00000068775	TRANSLATION	protein_coding	start	-	-	101	0	0	0	0	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000023104	Rfc2	ENSMUST00000202761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023104	Rfc2	ENSMUST00000023867	ENSMUSP00000023867	TRANSLATION	protein_coding	-	CCDS19722.1	1	349	16	8.55	3.9	135.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000023104	Rfc2	ENSMUST00000201464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023104	Rfc2	ENSMUST00000200767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023104	Rfc2	ENSMUST00000201258	ENSMUSP00000144516	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023104	Rfc2	ENSMUST00000201674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002633	Shh	ENSMUST00000002708	ENSMUSP00000002708	TRANSLATION	protein_coding	-	CCDS19146.1	1	437	11	2.48	1.5	556.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000095346	Gm21905	ENSMUST00000177616	ENSMUSP00000136067	TRANSLATION	protein_coding	start/stop	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035020	Epgn	ENSMUST00000202724	ENSMUSP00000144500	TRANSLATION	protein_coding	-	-	1	137	0	1	0	0	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000035020	Epgn	ENSMUST00000041516	ENSMUSP00000046987	TRANSLATION	protein_coding	-	CCDS19419.1	1	152	0	1	2.9	0	1	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000029470	P2rx4	ENSMUST00000152337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029470	P2rx4	ENSMUST00000139631	ENSMUSP00000118163	TRANSLATION	protein_coding	-	-	5	339	0	8.314	0.5	422.3	4	-4,-7	-	-	3	MINOR
ENSMUSG00000029470	P2rx4	ENSMUST00000031429	ENSMUSP00000031429	TRANSLATION	protein_coding	-	CCDS19654.2	1	388	0	9.814	6.3	574.7	3	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000029470	P2rx4	ENSMUST00000132062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029470	P2rx4	ENSMUST00000198560	ENSMUSP00000142849	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0.8	0	36.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029470	P2rx4	ENSMUST00000139712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029470	P2rx4	ENSMUST00000081554	ENSMUSP00000080269	TRANSLATION	protein_coding	-	CCDS80393.1	1	361	0	9.064	0.5	509.2	3	-4,-7	-	-	6.57	MINOR
ENSMUSG00000029470	P2rx4	ENSMUST00000142664	ENSMUSP00000117193	TRANSLATION	protein_coding	-	CCDS80392.1	1	366	0	9.064	0.5	487.9	4	-4,-7	-	-	5.292	MINOR
ENSMUSG00000029470	P2rx4	ENSMUST00000195963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106918	Mrpl33	ENSMUST00000201923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106918	Mrpl33	ENSMUST00000202655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000201719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000031024	ENSMUSP00000031024	TRANSLATION	protein_coding	-	CCDS39056.1	1	65	0	2.16	19.5	26.8	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000106918	Mrpl33	ENSMUST00000202243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000201910	ENSMUSP00000144669	TRANSLATION	nonsense_mediated_decay	-	-	2	107	0	1.66	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000106918	Mrpl33	ENSMUST00000202953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000201620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106918	Mrpl33	ENSMUST00000202690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000201483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000106918	Mrpl33	ENSMUST00000201999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072694	1500011B03Rik	ENSMUST00000234046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072694	1500011B03Rik	ENSMUST00000100850	ENSMUSP00000098411	TRANSLATION	protein_coding	-	CCDS39225.1	1	139	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000072694	1500011B03Rik	ENSMUST00000061251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072694	1500011B03Rik	ENSMUST00000112160	ENSMUSP00000107786	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	1	0,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000072694	1500011B03Rik	ENSMUST00000140374	ENSMUSP00000116625	TRANSLATION	protein_coding	-	-	2	72	0	0	0	0	1	0,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025340	Rabgef1	ENSMUST00000143727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025340	Rabgef1	ENSMUST00000026390	ENSMUSP00000026390	TRANSLATION	protein_coding	-	CCDS19708.1	1	491	4	7.93	9.6	147.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025340	Rabgef1	ENSMUST00000202729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025340	Rabgef1	ENSMUST00000125937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025340	Rabgef1	ENSMUST00000143865	ENSMUSP00000118590	TRANSLATION	nonsense_mediated_decay	start	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025340	Rabgef1	ENSMUST00000119027	ENSMUSP00000112537	TRANSLATION	protein_coding	stop	-	5	221	4	4.1	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025340	Rabgef1	ENSMUST00000148264	ENSMUSP00000119245	TRANSLATION	protein_coding	stop	-	5	250	4	5.18	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025340	Rabgef1	ENSMUST00000119797	ENSMUSP00000114103	TRANSLATION	protein_coding	-	CCDS19708.1	1	491	4	7.93	9.6	147.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025340	Rabgef1	ENSMUST00000147493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056413	Adap1	ENSMUST00000156815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056413	Adap1	ENSMUST00000151450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056413	Adap1	ENSMUST00000123748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056413	Adap1	ENSMUST00000196271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056413	Adap1	ENSMUST00000126762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056413	Adap1	ENSMUST00000110865	ENSMUSP00000106489	TRANSLATION	protein_coding	-	CCDS19806.2	5	374	4	9.08	13.7	200.7	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000072814	Gm7982	ENSMUST00000101011	ENSMUSP00000098573	TRANSLATION	protein_coding	-	-	5	480	2	0	0.5	0	0	-4,-6	-	-	2	ALTERNATIVE:2
ENSMUSG00000072814	Gm7982	ENSMUST00000136313	ENSMUSP00000114696	TRANSLATION	protein_coding	-	-	5	481	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:5
ENSMUSG00000072814	Gm7982	ENSMUST00000154086	ENSMUSP00000115998	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029098	Acox3	ENSMUST00000156125	ENSMUSP00000119216	TRANSLATION	protein_coding	stop	-	2	83	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029098	Acox3	ENSMUST00000114238	ENSMUSP00000109876	TRANSLATION	protein_coding	-	-	1	685	32	11.93	0	229.9	0	-4,-5	-	-	16.35	MINOR
ENSMUSG00000029098	Acox3	ENSMUST00000201106	ENSMUSP00000144658	TRANSLATION	protein_coding	start/stop	-	5	143	8	1.76	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029098	Acox3	ENSMUST00000154796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029098	Acox3	ENSMUST00000127641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029098	Acox3	ENSMUST00000201659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029098	Acox3	ENSMUST00000114237	ENSMUSP00000109875	TRANSLATION	protein_coding	-	CCDS19232.1	1	700	32	12.09	1.5	252.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029098	Acox3	ENSMUST00000068563	ENSMUSP00000067178	TRANSLATION	protein_coding	-	-	1	697	32	11.93	0	229.9	0	-4,-5	-	-	16.35	MINOR
ENSMUSG00000029098	Acox3	ENSMUST00000068947	ENSMUSP00000063412	TRANSLATION	protein_coding	-	CCDS19232.1	1	700	32	12.09	1.5	252.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029098	Acox3	ENSMUST00000202266	ENSMUSP00000144499	TRANSLATION	protein_coding	-	-	5	673	32	11.93	0.5	229.9	0	-4,-5	-	-	16.35	MINOR
ENSMUSG00000001739	Cldn15	ENSMUST00000111093	ENSMUSP00000106722	TRANSLATION	protein_coding	-	CCDS19758.1	5	227	0	3.75	2.8	116.6	3	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000001739	Cldn15	ENSMUST00000001790	ENSMUSP00000001790	TRANSLATION	protein_coding	-	CCDS19758.1	1	227	0	3.75	2.8	116.6	3	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000001739	Cldn15	ENSMUST00000128391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046000	Naa11	ENSMUST00000060265	ENSMUSP00000057336	TRANSLATION	protein_coding	-	CCDS19453.1	1	218	22	1	1.5	59.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040731	Eif4h	ENSMUST00000201263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040731	Eif4h	ENSMUST00000202622	ENSMUSP00000143910	TRANSLATION	protein_coding	-	CCDS19723.1	1	248	0	2.775	3.9	48.2	0	-4,-5	-	-	12.344	MINOR
ENSMUSG00000040731	Eif4h	ENSMUST00000200874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040731	Eif4h	ENSMUST00000036125	ENSMUSP00000048833	TRANSLATION	protein_coding	-	CCDS84968.1	1	228	0	3.15	6.3	48.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040731	Eif4h	ENSMUST00000202289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029594	Rbm19	ENSMUST00000202213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029594	Rbm19	ENSMUST00000202388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029594	Rbm19	ENSMUST00000201075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029594	Rbm19	ENSMUST00000201527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029594	Rbm19	ENSMUST00000202788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029594	Rbm19	ENSMUST00000031590	ENSMUSP00000031590	TRANSLATION	protein_coding	-	CCDS19616.1	1	952	0	14.48	1.5	266.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029594	Rbm19	ENSMUST00000200841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029594	Rbm19	ENSMUST00000202777	ENSMUSP00000144339	TRANSLATION	nonsense_mediated_decay	-	-	1	870	0	12.65	0	233.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029594	Rbm19	ENSMUST00000201105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029594	Rbm19	ENSMUST00000201792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037339	Fam53a	ENSMUST00000150033	ENSMUSP00000117350	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	51	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037339	Fam53a	ENSMUST00000153696	ENSMUSP00000118139	TRANSLATION	protein_coding	stop	-	1	59	0	0	0	49.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037339	Fam53a	ENSMUST00000137705	ENSMUSP00000121667	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	0	0	51	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037339	Fam53a	ENSMUST00000065119	ENSMUSP00000070770	TRANSLATION	protein_coding	-	CCDS19203.1	1	402	0	0	1.5	368.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000037339	Fam53a	ENSMUST00000045329	ENSMUSP00000045539	TRANSLATION	protein_coding	-	CCDS19203.1	1	402	0	0	1.5	368.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000037339	Fam53a	ENSMUST00000140043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037339	Fam53a	ENSMUST00000065162	ENSMUSP00000069521	TRANSLATION	protein_coding	-	-	1	321	0	0	0	368.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037339	Fam53a	ENSMUST00000155980	ENSMUSP00000120786	TRANSLATION	protein_coding	stop	-	5	35	0	0	0	37.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069355	Gm5152	ENSMUST00000081735	ENSMUSP00000080432	TRANSLATION	protein_coding	start	-	5	190	0	0	0	78.4	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000069355	Gm5152	ENSMUST00000088625	ENSMUSP00000085997	TRANSLATION	protein_coding	start/stop	-	5	139	0	0	0	78.4	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000063935	Zar1	ENSMUST00000200883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063935	Zar1	ENSMUST00000073528	ENSMUSP00000073221	TRANSLATION	protein_coding	-	CCDS19331.1	1	361	10	0	1.5	34.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063935	Zar1	ENSMUST00000202174	ENSMUSP00000144079	TRANSLATION	protein_coding	start	-	3	204	4	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029122	Evc	ENSMUST00000149890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029122	Evc	ENSMUST00000114154	ENSMUSP00000109791	TRANSLATION	protein_coding	-	-	1	857	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029122	Evc	ENSMUST00000154885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029122	Evc	ENSMUST00000146568	ENSMUSP00000114825	TRANSLATION	protein_coding	start	-	5	144	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029122	Evc	ENSMUST00000031005	ENSMUSP00000031005	TRANSLATION	protein_coding	-	CCDS19247.1	1	1005	0	0	1.5	0	1	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000029122	Evc	ENSMUST00000124426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029122	Evc	ENSMUST00000114148	ENSMUSP00000109785	TRANSLATION	protein_coding	-	-	1	629	0	0	0	0	1	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029122	Evc	ENSMUST00000133376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029122	Evc	ENSMUST00000139550	ENSMUSP00000120191	TRANSLATION	protein_coding	start	-	3	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029641	Rasl11a	ENSMUST00000198570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029641	Rasl11a	ENSMUST00000031646	ENSMUSP00000031646	TRANSLATION	protein_coding	-	CCDS39396.1	1	242	16	2.3	6.6	107.7	0	-3,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000086815	3110082J24Rik	ENSMUST00000127749	ENSMUSP00000131958	TRANSLATION	protein_coding	-	CCDS57333.1	5	108	0	0	0.5	0	0	-2,2	-	-	0	PRINCIPAL:1
ENSMUSG00000086815	3110082J24Rik	ENSMUST00000199573	ENSMUSP00000142756	TRANSLATION	protein_coding	-	CCDS57333.1	1	108	0	0	0.5	0	0	-2,2	-	-	0	PRINCIPAL:1
ENSMUSG00000029384	2010109A12Rik	ENSMUST00000031330	ENSMUSP00000031330	TRANSLATION	protein_coding	-	CCDS57357.1	1	119	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000029384	2010109A12Rik	ENSMUST00000201993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109903	Gm28710	ENSMUST00000211738	ENSMUSP00000147354	TRANSLATION	protein_coding	-	-	5	962	44	8.86	0	182.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029177	Cenpa	ENSMUST00000149759	ENSMUSP00000142915	TRANSLATION	protein_coding	-	-	3	59	0	0.36	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000031073	ENSMUSP00000031073	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000197962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029177	Cenpa	ENSMUST00000199320	ENSMUSP00000143575	TRANSLATION	protein_coding	stop	-	3	99	0	1.91	0	70.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000144742	ENSMUSP00000122831	TRANSLATION	protein_coding	-	CCDS19162.1	1	134	0	3.41	0.5	133.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029177	Cenpa	ENSMUST00000150810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029177	Cenpa	ENSMUST00000134846	ENSMUSP00000119363	TRANSLATION	nonsense_mediated_decay	-	-	2	39	0	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000133316	ENSMUSP00000123493	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000199617	ENSMUSP00000142917	TRANSLATION	nonsense_mediated_decay	-	-	3	130	0	1.976	0	67.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029177	Cenpa	ENSMUST00000134372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075552	Cyp3a41b	ENSMUST00000075837	ENSMUSP00000075234	TRANSLATION	protein_coding	-	CCDS39389.1	1	504	31	11.1	5.1	451.4	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000089992	G6pd2	ENSMUST00000053876	ENSMUSP00000131163	TRANSLATION	protein_coding	-	CCDS19297.1	-	513	33	1	3.9	572.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000029715	Pop7	ENSMUST00000031728	ENSMUSP00000031728	TRANSLATION	protein_coding	-	CCDS19768.1	1	140	0	0	7.5	67	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029715	Pop7	ENSMUST00000111035	ENSMUSP00000106664	TRANSLATION	protein_coding	-	CCDS19768.1	-	140	0	0	7.5	67	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029145	Eif2b4	ENSMUST00000114603	ENSMUSP00000110250	TRANSLATION	protein_coding	-	CCDS51457.1	1	544	0	8.6704	4.1	315.9	0	-3,-1	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000029145	Eif2b4	ENSMUST00000200724	ENSMUSP00000144393	TRANSLATION	protein_coding	start	-	5	245	0	3.17	0	158.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029145	Eif2b4	ENSMUST00000200741	ENSMUSP00000144563	TRANSLATION	protein_coding	start/stop	-	5	163	0	4.474	0	110.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029145	Eif2b4	ENSMUST00000200929	ENSMUSP00000143826	TRANSLATION	protein_coding	start	-	3	57	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029145	Eif2b4	ENSMUST00000202758	ENSMUSP00000144361	TRANSLATION	protein_coding	-	-	5	566	0	8.6704	0	315.9	0	-4,-5	-	-	12	MINOR
ENSMUSG00000029145	Eif2b4	ENSMUST00000201154	ENSMUSP00000143802	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000029145	Eif2b4	ENSMUST00000166769	ENSMUSP00000130880	TRANSLATION	protein_coding	-	CCDS51457.1	5	544	0	8.6704	4.1	315.9	0	-3,-1	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000029145	Eif2b4	ENSMUST00000202616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029145	Eif2b4	ENSMUST00000200983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029145	Eif2b4	ENSMUST00000077693	ENSMUSP00000076875	TRANSLATION	protein_coding	-	CCDS19176.1	1	524	0	8.6704	6.3	315.9	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000029145	Eif2b4	ENSMUST00000202468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029145	Eif2b4	ENSMUST00000200977	ENSMUSP00000143975	TRANSLATION	protein_coding	start	-	5	63	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002240	Prr27	ENSMUST00000101056	ENSMUSP00000098617	TRANSLATION	protein_coding	-	CCDS51535.1	1	352	0	0	0.5	0	0	2,2	-	-	0	ALTERNATIVE:2
ENSMUSG00000002240	Prr27	ENSMUST00000002310	ENSMUSP00000002310	TRANSLATION	protein_coding	-	CCDS39134.1	1	344	0	0	0.5	0	0	4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000051502	Ufsp1	ENSMUST00000238804	ENSMUSP00000159195	TRANSLATION	protein_coding	-	-	-	133	0	1	0	60.8	0	-4,-6	-	-	5.574	MINOR
ENSMUSG00000051502	Ufsp1	ENSMUST00000052825	ENSMUSP00000056156	TRANSLATION	protein_coding	-	CCDS19764.1	-	217	0	2	0.5	117.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029587	Zfp12	ENSMUST00000077485	ENSMUSP00000076693	TRANSLATION	protein_coding	-	CCDS19837.1	1	654	60	1.4	0.5	434.5	0	-4,-6	-	-	17.568	PRINCIPAL:3
ENSMUSG00000029587	Zfp12	ENSMUST00000075916	ENSMUSP00000137971	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	1	0	83.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029587	Zfp12	ENSMUST00000160195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029587	Zfp12	ENSMUST00000162861	ENSMUSP00000123731	TRANSLATION	protein_coding	stop	-	3	47	0	1	0	81.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029587	Zfp12	ENSMUST00000032591	ENSMUSP00000032591	TRANSLATION	protein_coding	-	CCDS71702.1	1	686	60	1.4	0.5	441.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000029610	Aimp2	ENSMUST00000031613	ENSMUSP00000031613	TRANSLATION	protein_coding	-	CCDS51692.1	1	320	0	3.8	2.7	102.9	0	-4,-7	-	-	12.68	PRINCIPAL:1
ENSMUSG00000029610	Aimp2	ENSMUST00000100483	ENSMUSP00000098052	TRANSLATION	protein_coding	-	CCDS39374.1	1	280	0	2.8	6	24.8	0	-4,-5	-	-	7.316	MINOR
ENSMUSG00000029610	Aimp2	ENSMUST00000149473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029610	Aimp2	ENSMUST00000128440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096045	Gm21698	ENSMUST00000178487	ENSMUSP00000137405	TRANSLATION	protein_coding	start	-	5	221	0	0	0.5	83.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096045	Gm21698	ENSMUST00000191203	ENSMUSP00000140294	TRANSLATION	protein_coding	-	-	5	267	0	0	0.5	83.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029617	Ccz1	ENSMUST00000031621	ENSMUSP00000031621	TRANSLATION	protein_coding	-	CCDS19846.1	1	480	0	1.4	1.5	316	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029617	Ccz1	ENSMUST00000199922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029617	Ccz1	ENSMUST00000200619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029617	Ccz1	ENSMUST00000197555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029617	Ccz1	ENSMUST00000200669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029219	Slc10a4	ENSMUST00000031127	ENSMUSP00000031127	TRANSLATION	protein_coding	-	CCDS19336.1	1	437	0	0.92	1.5	120.5	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029219	Slc10a4	ENSMUST00000201304	ENSMUSP00000144062	TRANSLATION	protein_coding	-	-	1	238	0	0.52	0	34.2	7	2,-2	-	-	4.212	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000119523	ENSMUSP00000113557	TRANSLATION	protein_coding	-	-	5	673	7	5.13	2.4	83.1	0	-4,-5	-	-	15.729	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000140469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039753	Fbxl5	ENSMUST00000124610	ENSMUSP00000116720	TRANSLATION	protein_coding	-	-	5	679	7	5.63	0	115	0	-4,-5	-	-	18	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000047857	ENSMUSP00000045792	TRANSLATION	protein_coding	-	CCDS51489.1	1	690	7	5.63	7.5	115	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000039753	Fbxl5	ENSMUST00000199055	ENSMUSP00000142582	TRANSLATION	protein_coding	stop	-	5	107	3	2.75	0	26.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000141902	ENSMUSP00000120338	TRANSLATION	protein_coding	start	-	5	611	4	3.38	0	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000143316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039753	Fbxl5	ENSMUST00000114047	ENSMUSP00000109681	TRANSLATION	protein_coding	-	-	1	684	6	4.88	0	83.1	0	-4,-5	-	-	13.728	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000087465	ENSMUSP00000084733	TRANSLATION	protein_coding	-	CCDS19263.1	1	623	7	5.63	0.5	104.8	0	-4,-5	-	-	17.388	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000124421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039753	Fbxl5	ENSMUST00000121736	ENSMUSP00000112444	TRANSLATION	protein_coding	-	-	1	580	4	4.38	0	72.9	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000039753	Fbxl5	ENSMUST00000196483	ENSMUSP00000143703	TRANSLATION	protein_coding	-	-	1	689	7	5.63	7.5	115	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000037108	Zcwpw1	ENSMUST00000128946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037108	Zcwpw1	ENSMUST00000141642	ENSMUSP00000120909	TRANSLATION	protein_coding	start/stop	-	3	269	0	1.35	0	54.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037108	Zcwpw1	ENSMUST00000127541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037108	Zcwpw1	ENSMUST00000035852	ENSMUSP00000048730	TRANSLATION	protein_coding	-	CCDS19779.1	1	630	4	2.55	0.5	119.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037108	Zcwpw1	ENSMUST00000200505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049971	Glt1d1	ENSMUST00000118139	ENSMUSP00000113864	TRANSLATION	protein_coding	-	CCDS51651.1	1	346	0	3.82	6.3	75.2	0	-1,2	-	-	14	PRINCIPAL:1
ENSMUSG00000049971	Glt1d1	ENSMUST00000134529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049971	Glt1d1	ENSMUST00000137157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029095	Ablim2	ENSMUST00000101280	ENSMUSP00000098838	TRANSLATION	protein_coding	-	CCDS51474.1	5	607	30	7.92	0.5	499.8	0	-4,-5	-	-	11.4	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000153529	ENSMUSP00000118019	TRANSLATION	protein_coding	start	-	3	109	0	1.83	0	118.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000114204	ENSMUSP00000109842	TRANSLATION	protein_coding	-	CCDS51476.1	5	606	30	7.92	1.7	541.3	0	-4,-5	-	-	13.375	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000151322	ENSMUSP00000114616	TRANSLATION	protein_coding	start/stop	-	3	195	0	0	0	178.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000153025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029095	Ablim2	ENSMUST00000125378	ENSMUSP00000115931	TRANSLATION	protein_coding	start	-	3	170	0	0	0	98.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000129347	ENSMUSP00000123525	TRANSLATION	protein_coding	-	CCDS51473.1	5	664	30	8.22	0.5	606.1	0	-4,-5	-	-	17.622	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000114203	ENSMUSP00000109841	TRANSLATION	protein_coding	-	-	5	346	1	2.96	2.4	372.6	0	-4,-5	-	-	0.483	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000135885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029095	Ablim2	ENSMUST00000054598	ENSMUSP00000050571	TRANSLATION	protein_coding	-	CCDS19235.1	1	612	30	8.22	3.9	612.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000029095	Ablim2	ENSMUST00000151636	ENSMUSP00000123616	TRANSLATION	protein_coding	start/stop	-	5	220	1	0.83	0	171.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000130233	ENSMUSP00000118159	TRANSLATION	protein_coding	stop	-	5	189	1	0.83	0	192.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000114210	ENSMUSP00000109848	TRANSLATION	nonsense_mediated_decay	-	-	2	559	30	6.09	0	421.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000130209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029095	Ablim2	ENSMUST00000114206	ENSMUSP00000109844	TRANSLATION	protein_coding	-	CCDS51475.1	5	617	30	7.92	0.5	555.7	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000114205	ENSMUSP00000109843	TRANSLATION	protein_coding	-	CCDS51477.1	5	573	30	7.92	3.9	546.8	0	-4,-5	-	-	14.464	MINOR
ENSMUSG00000029095	Ablim2	ENSMUST00000150146	ENSMUSP00000144134	TRANSLATION	protein_coding	-	-	2	35	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000002297	Dbf4	ENSMUST00000197442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002297	Dbf4	ENSMUST00000168637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002297	Dbf4	ENSMUST00000170927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002297	Dbf4	ENSMUST00000166364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002297	Dbf4	ENSMUST00000168500	ENSMUSP00000132985	TRANSLATION	protein_coding	-	-	5	356	2	2.8	0	22.3	0	-4,-6	-	-	7.514	MINOR
ENSMUSG00000002297	Dbf4	ENSMUST00000002368	ENSMUSP00000002368	TRANSLATION	protein_coding	-	CCDS57324.1	1	662	4	3.8	0.5	88.6	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000002297	Dbf4	ENSMUST00000198785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002297	Dbf4	ENSMUST00000171808	ENSMUSP00000132906	TRANSLATION	protein_coding	-	CCDS19081.1	1	663	4	3.8	0.5	88.6	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000002297	Dbf4	ENSMUST00000163141	ENSMUSP00000129317	TRANSLATION	protein_coding	start	-	5	114	4	2	0	66.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000198937	ENSMUSP00000142986	TRANSLATION	protein_coding	stop	-	1	727	0	0	0	133.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000036031	ENSMUSP00000043679	TRANSLATION	protein_coding	-	CCDS39021.1	1	858	0	0	0.5	133.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039934	Gsap	ENSMUST00000198071	ENSMUSP00000142407	TRANSLATION	nonsense_mediated_decay	-	-	1	172	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000197404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039934	Gsap	ENSMUST00000196035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039934	Gsap	ENSMUST00000195969	ENSMUSP00000142560	TRANSLATION	nonsense_mediated_decay	-	-	1	173	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000198014	ENSMUSP00000143739	TRANSLATION	nonsense_mediated_decay	-	-	1	197	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000199553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039934	Gsap	ENSMUST00000198930	ENSMUSP00000142596	TRANSLATION	protein_coding	start	-	3	97	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039934	Gsap	ENSMUST00000197522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039899	Fgl2	ENSMUST00000035799	ENSMUSP00000046131	TRANSLATION	protein_coding	-	CCDS19103.1	1	432	6	1.04	1.5	335.7	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029545	Acads	ENSMUST00000031524	ENSMUSP00000031524	TRANSLATION	protein_coding	-	CCDS19579.1	1	412	29	8.5	5.4	380.7	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000029545	Acads	ENSMUST00000131726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029545	Acads	ENSMUST00000141142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029545	Acads	ENSMUST00000153374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055302	Mrfap1	ENSMUST00000068795	ENSMUSP00000067135	TRANSLATION	protein_coding	-	CCDS19242.1	1	125	0	0	7.5	156.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000067724	Gbx1	ENSMUST00000088311	ENSMUSP00000085651	TRANSLATION	protein_coding	-	CCDS19123.1	1	418	0	0.8	0.5	81.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040473	Cfap69	ENSMUST00000196165	ENSMUSP00000143393	TRANSLATION	protein_coding	-	-	1	771	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000040473	Cfap69	ENSMUST00000150140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040473	Cfap69	ENSMUST00000132510	ENSMUSP00000122569	TRANSLATION	nonsense_mediated_decay	-	-	5	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000124734	ENSMUSP00000119859	TRANSLATION	protein_coding	start	-	5	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000155048	ENSMUSP00000120771	TRANSLATION	protein_coding	start	-	5	76	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000054865	ENSMUSP00000053206	TRANSLATION	protein_coding	-	CCDS19075.1	1	942	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000040473	Cfap69	ENSMUST00000148193	ENSMUSP00000114623	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000061008	ENSMUSP00000051741	TRANSLATION	protein_coding	stop	-	1	576	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000135252	ENSMUSP00000117518	TRANSLATION	protein_coding	-	-	1	627	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000040473	Cfap69	ENSMUST00000199314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040473	Cfap69	ENSMUST00000148347	ENSMUSP00000119944	TRANSLATION	protein_coding	start	-	5	478	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040473	Cfap69	ENSMUST00000198121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094282	Cfap73	ENSMUST00000177908	ENSMUSP00000137554	TRANSLATION	protein_coding	-	CCDS57376.1	5	306	0	0	0.5	77.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029416	Slc15a4	ENSMUST00000200212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029416	Slc15a4	ENSMUST00000124569	ENSMUSP00000121595	TRANSLATION	nonsense_mediated_decay	start	-	5	246	0	1.422	0	180.1	11	-4,-6	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000152727	ENSMUSP00000116529	TRANSLATION	protein_coding	stop	-	3	81	0	1.2	0	73.4	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000182841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029416	Slc15a4	ENSMUST00000144603	ENSMUSP00000116420	TRANSLATION	nonsense_mediated_decay	start	-	3	127	0	0.798	0	122.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000198486	ENSMUSP00000142476	TRANSLATION	protein_coding	start/stop	-	3	169	0	2.198	0	127.5	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000198727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029416	Slc15a4	ENSMUST00000031367	ENSMUSP00000031367	TRANSLATION	protein_coding	-	CCDS19688.1	1	574	0	5.574	0.5	416.7	19	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029416	Slc15a4	ENSMUST00000155321	ENSMUSP00000117258	TRANSLATION	protein_coding	stop	-	3	105	0	0.6	0	117.2	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000153832	ENSMUSP00000123116	TRANSLATION	nonsense_mediated_decay	-	-	1	296	0	1.578	0	181.3	11	-4,0	-	-	-1	MINOR
ENSMUSG00000029416	Slc15a4	ENSMUST00000199810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029440	Psmd9	ENSMUST00000100729	ENSMUSP00000098295	TRANSLATION	protein_coding	-	CCDS39266.1	1	222	0	3.398	1.5	27.5	0	-4,-5	-	-	11.73	PRINCIPAL:1
ENSMUSG00000029440	Psmd9	ENSMUST00000197809	ENSMUSP00000143635	TRANSLATION	protein_coding	start	-	3	175	0	2.723	0	28.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029440	Psmd9	ENSMUST00000196137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029440	Psmd9	ENSMUST00000198183	ENSMUSP00000142433	TRANSLATION	protein_coding	start	-	3	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029440	Psmd9	ENSMUST00000199260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029440	Psmd9	ENSMUST00000133386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029440	Psmd9	ENSMUST00000200560	-	NO_TRANSLATION	TEC
ENSMUSG00000029490	Mfsd7a	ENSMUST00000238510	ENSMUSP00000158690	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029490	Mfsd7a	ENSMUST00000238630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029490	Mfsd7a	ENSMUST00000031455	ENSMUSP00000031455	TRANSLATION	protein_coding	-	CCDS19511.1	1	516	0	0	1.5	76.2	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000029490	Mfsd7a	ENSMUST00000238429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029012	Orc5	ENSMUST00000030872	ENSMUSP00000030872	TRANSLATION	protein_coding	-	CCDS19110.1	1	435	16	11.5	7.5	282.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000029012	Orc5	ENSMUST00000141263	ENSMUSP00000120214	TRANSLATION	protein_coding	stop	-	5	312	13	7.882	0	164.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029012	Orc5	ENSMUST00000138248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029012	Orc5	ENSMUST00000142987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029012	Orc5	ENSMUST00000135906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029012	Orc5	ENSMUST00000199943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045318	Adra2c	ENSMUST00000049545	ENSMUSP00000059705	TRANSLATION	protein_coding	-	CCDS19226.1	-	458	0	0.48	1.5	240.2	0	-1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000104752	Gm5565	ENSMUST00000199463	ENSMUSP00000143497	TRANSLATION	protein_coding	-	-	5	317	0	0	0.5	29.4	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000053030	Spink2	ENSMUST00000065216	ENSMUSP00000067117	TRANSLATION	protein_coding	-	CCDS39121.1	1	86	0	2.014	0.5	60.8	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000053030	Spink2	ENSMUST00000120429	ENSMUSP00000112806	TRANSLATION	protein_coding	-	CCDS80307.1	1	56	0	0.264	0.5	0	0	4,-1	-	-	0.786	MINOR
ENSMUSG00000053030	Spink2	ENSMUST00000121825	ENSMUSP00000113823	TRANSLATION	protein_coding	-	CCDS80306.1	3	59	0	2.014	0.5	60.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000090961	Vmn2r8	ENSMUST00000233745	ENSMUSP00000156796	TRANSLATION	protein_coding	-	-	-	544	2	2.4	0	137.3	0	1,-3	-	-	6.44	MINOR
ENSMUSG00000090961	Vmn2r8	ENSMUST00000172140	ENSMUSP00000126953	TRANSLATION	protein_coding	-	CCDS51594.1	5	848	4	3.18	0.5	365.5	8	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000090961	Vmn2r8	ENSMUST00000233865	ENSMUSP00000156404	TRANSLATION	nonsense_mediated_decay	-	-	-	74	0	0.2	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000090961	Vmn2r8	ENSMUST00000233220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090961	Vmn2r8	ENSMUST00000232952	ENSMUSP00000156434	TRANSLATION	protein_coding	-	-	-	827	4	2.88	0	351.1	8	1,-3	-	-	14.536	MINOR
ENSMUSG00000090961	Vmn2r8	ENSMUST00000233055	ENSMUSP00000156391	TRANSLATION	protein_coding	-	-	-	565	2	2.7	0	150.2	0	1,-3	-	-	7.04	MINOR
ENSMUSG00000105867	Gm42517	ENSMUST00000197216	ENSMUSP00000152585	TRANSLATION	protein_coding	-	-	-	374	0	0	0	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000029147	Ppm1g	ENSMUST00000202294	ENSMUSP00000144644	TRANSLATION	protein_coding	-	-	5	435	13	6.1264	0	250.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000029147	Ppm1g	ENSMUST00000031032	ENSMUSP00000031032	TRANSLATION	protein_coding	-	CCDS19179.1	1	542	13	6.1264	7.5	250.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029147	Ppm1g	ENSMUST00000200740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029147	Ppm1g	ENSMUST00000202402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029147	Ppm1g	ENSMUST00000200778	ENSMUSP00000144094	TRANSLATION	protein_coding	start/stop	-	5	230	6	1.83	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029147	Ppm1g	ENSMUST00000201407	ENSMUSP00000144556	TRANSLATION	protein_coding	start	-	3	194	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033036	Gm7879	ENSMUST00000122204	ENSMUSP00000142767	TRANSLATION	protein_coding	-	-	-	177	8	2.75	17.5	164.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033036	Gm7879	ENSMUST00000200338	ENSMUSP00000142776	TRANSLATION	protein_coding	-	-	5	134	3	1.75	0	83.3	0	-4,-5	-	-	7.188	MINOR
ENSMUSG00000028953	Abcf2	ENSMUST00000030795	ENSMUSP00000030795	TRANSLATION	protein_coding	-	CCDS19125.1	1	628	17	7.82	5.1	159.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029603	Dtx1	ENSMUST00000124079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029603	Dtx1	ENSMUST00000201264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029603	Dtx1	ENSMUST00000144889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029603	Dtx1	ENSMUST00000031607	ENSMUSP00000031607	TRANSLATION	protein_coding	-	CCDS19624.1	1	627	7	5.07	1.5	151.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029603	Dtx1	ENSMUST00000151562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029603	Dtx1	ENSMUST00000145174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043913	Ccdc60	ENSMUST00000050178	ENSMUSP00000049912	TRANSLATION	protein_coding	-	CCDS19599.1	1	545	0	0	1.5	735.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043913	Ccdc60	ENSMUST00000086483	ENSMUSP00000083671	TRANSLATION	protein_coding	-	-	1	207	0	0	0	181.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000037962	Rflna	ENSMUST00000145946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037962	Rflna	ENSMUST00000036109	ENSMUSP00000048230	TRANSLATION	protein_coding	-	CCDS19682.1	5	204	0	0	1.5	254	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037962	Rflna	ENSMUST00000197746	ENSMUSP00000142824	TRANSLATION	protein_coding	-	CCDS19682.1	1	204	0	0	1.5	254	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029705	Cux1	ENSMUST00000177305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029705	Cux1	ENSMUST00000177297	ENSMUSP00000134819	TRANSLATION	nonsense_mediated_decay	-	-	5	543	0	0	0	53.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000176778	ENSMUSP00000135892	TRANSLATION	protein_coding	-	-	5	1509	0	3.9	1.5	309.5	0	-4,-5	-	-	12.244	ALTERNATIVE:2
ENSMUSG00000029705	Cux1	ENSMUST00000176172	ENSMUSP00000135086	TRANSLATION	protein_coding	-	-	1	1517	0	3.9	0	309.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029705	Cux1	ENSMUST00000163906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029705	Cux1	ENSMUST00000176486	ENSMUSP00000135370	TRANSLATION	protein_coding	start	-	1	1389	0	3.9	0	309.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000176216	ENSMUSP00000135054	TRANSLATION	protein_coding	-	CCDS71685.1	1	678	0	0	5.1	198.7	1	-4,-7	-	-	2	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000176501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029705	Cux1	ENSMUST00000176423	ENSMUSP00000135036	TRANSLATION	protein_coding	start/stop	-	3	268	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000175975	ENSMUSP00000135223	TRANSLATION	protein_coding	-	CCDS71684.1	1	1504	0	3.9	1.5	309.5	0	-4,-7	-	-	12.244	ALTERNATIVE:2
ENSMUSG00000029705	Cux1	ENSMUST00000004097	ENSMUSP00000004097	TRANSLATION	protein_coding	-	CCDS39328.1	1	1426	0	3.9	1.5	309.5	0	-4,-7	-	-	12.244	PRINCIPAL:3
ENSMUSG00000029705	Cux1	ENSMUST00000175998	ENSMUSP00000135816	TRANSLATION	protein_coding	start	-	5	472	0	0	0	198.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000176745	ENSMUSP00000135512	TRANSLATION	protein_coding	-	CCDS57391.1	1	676	0	0	5.1	198.7	1	-4,-7	-	-	2	MINOR
ENSMUSG00000029705	Cux1	ENSMUST00000175918	ENSMUSP00000135606	TRANSLATION	nonsense_mediated_decay	-	-	5	199	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096949	Gm26897	ENSMUST00000180627	ENSMUSP00000138054	TRANSLATION	protein_coding	start/stop	-	5	31	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029291	Rufy3	ENSMUST00000198965	ENSMUSP00000143302	TRANSLATION	protein_coding	-	CCDS80324.1	1	669	3	6.065	1.5	109.5	0	-4,-5	-	-	15.144	PRINCIPAL:1
ENSMUSG00000029291	Rufy3	ENSMUST00000199312	ENSMUSP00000143115	TRANSLATION	protein_coding	-	CCDS80325.1	1	487	0	4.75	13.8	109.5	0	-4,-5	-	-	13.028	MINOR
ENSMUSG00000029291	Rufy3	ENSMUST00000031229	ENSMUSP00000031229	TRANSLATION	protein_coding	-	CCDS19403.1	1	469	0	4.75	15	109.5	0	-4,-5	-	-	13.372	MINOR
ENSMUSG00000029291	Rufy3	ENSMUST00000199956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029291	Rufy3	ENSMUST00000199207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029291	Rufy3	ENSMUST00000197664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029291	Rufy3	ENSMUST00000196686	ENSMUSP00000143209	TRANSLATION	protein_coding	-	CCDS80325.1	1	487	0	4.75	13.8	109.5	0	-4,-5	-	-	13.028	MINOR
ENSMUSG00000029291	Rufy3	ENSMUST00000196894	ENSMUSP00000143770	TRANSLATION	protein_coding	-	CCDS80323.1	1	519	0	4.75	1.5	109.5	0	-4,-5	-	-	9.516	MINOR
ENSMUSG00000032741	Tpcn1	ENSMUST00000046426	ENSMUSP00000042188	TRANSLATION	protein_coding	-	CCDS39239.1	1	817	0	10.0836	5.1	202.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032741	Tpcn1	ENSMUST00000201601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032741	Tpcn1	ENSMUST00000202072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032741	Tpcn1	ENSMUST00000200708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201441	ENSMUSP00000144447	TRANSLATION	protein_coding	start/stop	-	5	262	0	3.948	0	196.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000111244	ENSMUSP00000106875	TRANSLATION	protein_coding	-	CCDS39304.1	1	1045	0	14.078	1.5	622.8	0	-4,-5	-	-	12.244	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000111245	ENSMUSP00000106876	TRANSLATION	protein_coding	-	CCDS39302.1	1	1026	0	14.078	1.5	622.8	0	-4,-5	-	-	12.244	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202165	ENSMUSP00000144420	TRANSLATION	protein_coding	start/stop	-	3	193	0	4.75	0	145.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202321	ENSMUSP00000143948	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201647	ENSMUSP00000144391	TRANSLATION	protein_coding	stop	-	5	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000073161	ENSMUSP00000072904	TRANSLATION	protein_coding	-	CCDS39305.1	1	1072	0	14.078	1.5	622.7	0	-4,-5	-	-	12.238	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000100652	ENSMUSP00000098217	TRANSLATION	protein_coding	-	CCDS39307.1	1	1104	0	14.078	1.5	622.7	0	-4,-5	-	-	12.238	PRINCIPAL:4
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000100654	ENSMUSP00000098219	TRANSLATION	protein_coding	-	CCDS39303.1	1	974	0	12.248	0.5	521.2	0	-4,-5	-	-	2.34	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000171794	ENSMUSP00000129392	TRANSLATION	protein_coding	-	CCDS39304.1	1	1045	0	14.078	1.5	622.8	0	-4,-5	-	-	12.244	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000100650	ENSMUSP00000098215	TRANSLATION	protein_coding	-	CCDS39306.1	1	1077	0	14.078	1.5	622.7	0	-4,-5	-	-	12.238	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202280	ENSMUSP00000143897	TRANSLATION	protein_coding	-	-	5	942	0	11.978	5.1	517.9	0	-4,-5	-	-	3.8	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000200817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201447	ENSMUSP00000144222	TRANSLATION	protein_coding	start/stop	-	3	193	0	2.448	0	148.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201495	ENSMUSP00000144003	TRANSLATION	nonsense_mediated_decay	start	-	5	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202829	ENSMUSP00000144604	TRANSLATION	protein_coding	start	-	1	345	0	6.48	0	264	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000200798	ENSMUSP00000144521	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.2	0	84.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202104	ENSMUSP00000144203	TRANSLATION	protein_coding	start	-	5	167	0	3.4	0	138	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000074114	ENSMUSP00000073752	TRANSLATION	protein_coding	-	CCDS51657.1	1	1001	0	12.028	1.5	517.9	0	-4,-5	-	-	2.146	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000167084	ENSMUSP00000132882	TRANSLATION	protein_coding	-	-	5	969	0	11.028	1.5	517.9	0	-4,-5	-	-	0.244	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202554	ENSMUSP00000143809	TRANSLATION	protein_coding	-	CCDS84967.1	1	1058	0	14.078	1.5	622.7	0	-4,-5	-	-	12.238	ALTERNATIVE:2
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000200944	ENSMUSP00000143848	TRANSLATION	protein_coding	-	CCDS80420.1	1	969	0	12.028	1.5	517.9	0	-4,-5	-	-	2.146	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201526	ENSMUSP00000144502	TRANSLATION	nonsense_mediated_decay	start	-	5	66	0	1	0	84.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000201704	ENSMUSP00000144373	TRANSLATION	protein_coding	start/stop	-	3	251	0	2.598	0	103.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023079	Gtf2ird1	ENSMUST00000202763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029290	Zfp326	ENSMUST00000150440	ENSMUSP00000118976	TRANSLATION	protein_coding	stop	-	5	415	8	0	0	245.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029290	Zfp326	ENSMUST00000135215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029290	Zfp326	ENSMUST00000138615	ENSMUSP00000122499	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029290	Zfp326	ENSMUST00000147683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029290	Zfp326	ENSMUST00000135374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029290	Zfp326	ENSMUST00000133155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029290	Zfp326	ENSMUST00000031227	ENSMUSP00000031227	TRANSLATION	protein_coding	-	CCDS19496.1	1	580	8	0	0.5	245.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029290	Zfp326	ENSMUST00000150109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029290	Zfp326	ENSMUST00000136558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038044	Cct8l1	ENSMUST00000045016	ENSMUSP00000044932	TRANSLATION	protein_coding	-	CCDS19134.1	-	562	21	0.6	1.5	380.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029472	Anapc5	ENSMUST00000086216	ENSMUSP00000083393	TRANSLATION	protein_coding	-	CCDS39258.1	1	740	0	18.28	1.5	107.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000029472	Anapc5	ENSMUST00000197074	ENSMUSP00000143053	TRANSLATION	protein_coding	-	CCDS80398.1	1	732	0	17.95	0.5	107.6	0	-4,-7	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000029472	Anapc5	ENSMUST00000199025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029472	Anapc5	ENSMUST00000199406	ENSMUSP00000142341	TRANSLATION	protein_coding	-	CCDS80399.1	1	656	0	14.29	0.5	107.6	0	-4,-7	-	-	6	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000200219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029472	Anapc5	ENSMUST00000196423	ENSMUSP00000143169	TRANSLATION	nonsense_mediated_decay	-	-	2	407	0	9.03	0	107.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000200058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029472	Anapc5	ENSMUST00000200148	ENSMUSP00000143457	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	1.5	0	52.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000196753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029472	Anapc5	ENSMUST00000197554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029472	Anapc5	ENSMUST00000199191	ENSMUSP00000143078	TRANSLATION	protein_coding	start/stop	-	1	45	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000196640	ENSMUSP00000142429	TRANSLATION	protein_coding	-	CCDS80400.1	1	732	0	17.95	0.5	107.6	0	-4,-7	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000029472	Anapc5	ENSMUST00000197719	ENSMUSP00000142579	TRANSLATION	protein_coding	-	CCDS80396.1	1	719	0	17.62	0.5	107.6	0	-4,-7	-	-	10.68	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000199926	ENSMUSP00000142981	TRANSLATION	nonsense_mediated_decay	-	-	3	95	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000200645	ENSMUSP00000142922	TRANSLATION	protein_coding	-	CCDS80397.1	1	727	0	17.95	1.5	107.6	0	-4,-7	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000029472	Anapc5	ENSMUST00000197331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029472	Anapc5	ENSMUST00000199130	ENSMUSP00000143535	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029472	Anapc5	ENSMUST00000200415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058488	Kl	ENSMUST00000078856	ENSMUSP00000077899	TRANSLATION	protein_coding	-	CCDS19889.1	1	1014	1	1.94	0.5	689.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058488	Kl	ENSMUST00000202096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036526	Card11	ENSMUST00000199091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036526	Card11	ENSMUST00000196169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036526	Card11	ENSMUST00000085786	ENSMUSP00000082941	TRANSLATION	protein_coding	-	CCDS51686.1	1	1154	0	5.02	6.5	75.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029480	Dhx37	ENSMUST00000198746	ENSMUSP00000143474	TRANSLATION	nonsense_mediated_decay	start	-	5	173	0	2.95	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029480	Dhx37	ENSMUST00000169485	ENSMUSP00000131734	TRANSLATION	protein_coding	-	CCDS19685.1	1	1150	10	11.26	1.5	234.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029480	Dhx37	ENSMUST00000196371	ENSMUSP00000143479	TRANSLATION	protein_coding	start	-	3	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029480	Dhx37	ENSMUST00000196444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041609	Bicdl1	ENSMUST00000141950	ENSMUSP00000119015	TRANSLATION	protein_coding	start/stop	-	3	235	0	0	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041609	Bicdl1	ENSMUST00000055408	ENSMUSP00000053547	TRANSLATION	protein_coding	-	CCDS39230.1	1	577	0	0	5.1	32.6	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000041609	Bicdl1	ENSMUST00000117847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041609	Bicdl1	ENSMUST00000141976	ENSMUSP00000120038	TRANSLATION	nonsense_mediated_decay	-	-	2	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041609	Bicdl1	ENSMUST00000148840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041609	Bicdl1	ENSMUST00000121746	ENSMUSP00000112949	TRANSLATION	protein_coding	-	-	1	82	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041609	Bicdl1	ENSMUST00000201869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041609	Bicdl1	ENSMUST00000148276	ENSMUSP00000119664	TRANSLATION	protein_coding	start/stop	-	5	302	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041609	Bicdl1	ENSMUST00000148627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041609	Bicdl1	ENSMUST00000118576	ENSMUSP00000112842	TRANSLATION	protein_coding	-	-	1	82	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052014	A330070K13Rik	ENSMUST00000200886	-	NO_TRANSLATION	antisense
ENSMUSG00000052014	A330070K13Rik	ENSMUST00000063656	ENSMUSP00000067580	TRANSLATION	protein_coding	-	CCDS57385.1	1	115	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000004947	Dtx2	ENSMUST00000199239	ENSMUSP00000142472	TRANSLATION	protein_coding	stop	-	2	151	0	0.86	0	87.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004947	Dtx2	ENSMUST00000111142	ENSMUSP00000106772	TRANSLATION	protein_coding	-	CCDS57389.1	1	619	8	5.23	5.1	136.5	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000004947	Dtx2	ENSMUST00000142041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004947	Dtx2	ENSMUST00000125827	ENSMUSP00000115122	TRANSLATION	nonsense_mediated_decay	-	-	1	357	0	0.78	0	113.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004947	Dtx2	ENSMUST00000005072	ENSMUSP00000005072	TRANSLATION	protein_coding	-	CCDS39322.1	1	618	8	5.23	3.9	136.5	0	-4,-7	-	-	19.414	PRINCIPAL:3
ENSMUSG00000004947	Dtx2	ENSMUST00000130345	ENSMUSP00000119285	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004947	Dtx2	ENSMUST00000111144	ENSMUSP00000106774	TRANSLATION	protein_coding	-	CCDS57390.1	1	573	8	5.23	5.1	136.5	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000004947	Dtx2	ENSMUST00000111145	ENSMUSP00000106775	TRANSLATION	protein_coding	-	CCDS57390.1	1	573	8	5.23	5.1	136.5	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000004947	Dtx2	ENSMUST00000140146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032898	Fbxo21	ENSMUST00000201889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032898	Fbxo21	ENSMUST00000200780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032898	Fbxo21	ENSMUST00000035579	ENSMUSP00000035506	TRANSLATION	protein_coding	-	CCDS84947.1	1	620	0	0	5.1	236.6	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000032898	Fbxo21	ENSMUST00000202447	ENSMUSP00000143873	TRANSLATION	protein_coding	-	CCDS19607.1	1	627	0	0	4.1	236.6	0	-4,-6	-	-	7.512	PRINCIPAL:3
ENSMUSG00000032898	Fbxo21	ENSMUST00000201611	ENSMUSP00000144071	TRANSLATION	protein_coding	start	-	5	504	0	0	0	209.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032898	Fbxo21	ENSMUST00000201427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044197	Gpr146	ENSMUST00000051293	ENSMUSP00000049707	TRANSLATION	protein_coding	-	CCDS19809.1	1	333	0	0.64	5.1	46.1	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044197	Gpr146	ENSMUST00000137254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044197	Gpr146	ENSMUST00000188655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044197	Gpr146	ENSMUST00000053120	ENSMUSP00000050973	TRANSLATION	protein_coding	-	-	-	139	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000044197	Gpr146	ENSMUST00000138631	ENSMUSP00000119464	TRANSLATION	protein_coding	stop	-	2	106	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000044197	Gpr146	ENSMUST00000100514	ENSMUSP00000098083	TRANSLATION	protein_coding	-	CCDS19809.1	1	333	0	0.64	5.1	46.1	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000091933	Gm8857	ENSMUST00000170064	ENSMUSP00000127481	TRANSLATION	protein_coding	start	-	5	182	0	0	0	81.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029526	1700123K08Rik	ENSMUST00000198778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029526	1700123K08Rik	ENSMUST00000199968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029526	1700123K08Rik	ENSMUST00000031501	ENSMUSP00000031501	TRANSLATION	protein_coding	-	CCDS51680.1	1	295	0	0	0.5	28.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000036555	Iqce	ENSMUST00000129704	ENSMUSP00000121457	TRANSLATION	protein_coding	start/stop	-	5	396	0	0	0	41.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036555	Iqce	ENSMUST00000135028	ENSMUSP00000143397	TRANSLATION	protein_coding	stop	-	3	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036555	Iqce	ENSMUST00000077890	ENSMUSP00000077050	TRANSLATION	protein_coding	-	CCDS84987.1	1	761	0	0	0.5	41.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036555	Iqce	ENSMUST00000139382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000123683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036555	Iqce	ENSMUST00000124005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000142081	ENSMUSP00000120637	TRANSLATION	protein_coding	stop	-	5	185	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036555	Iqce	ENSMUST00000136385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000148788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000147839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000149674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036555	Iqce	ENSMUST00000041783	ENSMUSP00000045913	TRANSLATION	protein_coding	-	CCDS39358.1	1	778	0	0	0.5	41.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000004951	Hspb1	ENSMUST00000111155	ENSMUSP00000106785	TRANSLATION	protein_coding	-	-	1	147	0	1.55	0	46.5	0	-4,-2	-	-	6.972	MINOR
ENSMUSG00000004951	Hspb1	ENSMUST00000005077	ENSMUSP00000005077	TRANSLATION	protein_coding	-	CCDS39320.1	1	209	0	2.55	2.7	84	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032623	Oas1d	ENSMUST00000044224	ENSMUSP00000048054	TRANSLATION	protein_coding	-	CCDS19631.1	1	361	8	4.7	0.5	245.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029402	Snrnp35	ENSMUST00000111453	ENSMUSP00000107080	TRANSLATION	protein_coding	-	CCDS19677.1	2	244	3	0.8	6.3	61	0	-4,-5	-	-	16.94	PRINCIPAL:1
ENSMUSG00000029402	Snrnp35	ENSMUST00000031349	ENSMUSP00000031349	TRANSLATION	protein_coding	-	CCDS19677.1	1	244	3	0.8	6.3	61	0	-4,-5	-	-	16.94	PRINCIPAL:1
ENSMUSG00000029402	Snrnp35	ENSMUST00000136567	ENSMUSP00000121120	TRANSLATION	protein_coding	stop	-	3	121	3	0.8	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052783	Grk4	ENSMUST00000074651	ENSMUSP00000074223	TRANSLATION	protein_coding	-	CCDS39070.1	1	177	0	4.41	0.5	57.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052783	Grk4	ENSMUST00000001112	ENSMUSP00000001112	TRANSLATION	protein_coding	-	CCDS19219.1	1	574	20	13.86	1.5	288.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000052783	Grk4	ENSMUST00000134217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052783	Grk4	ENSMUST00000153323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052783	Grk4	ENSMUST00000148588	ENSMUSP00000122826	TRANSLATION	protein_coding	start	-	2	96	0	2.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052271	Bhlha15	ENSMUST00000060747	ENSMUSP00000055493	TRANSLATION	protein_coding	-	CCDS19847.1	1	197	0	0.4	1.5	61.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041132	N4bp2l1	ENSMUST00000200926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041132	N4bp2l1	ENSMUST00000202279	ENSMUSP00000143792	TRANSLATION	nonsense_mediated_decay	-	-	3	60	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041132	N4bp2l1	ENSMUST00000202291	ENSMUSP00000144151	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041132	N4bp2l1	ENSMUST00000200840	ENSMUSP00000144439	TRANSLATION	nonsense_mediated_decay	-	-	1	63	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041132	N4bp2l1	ENSMUST00000016279	ENSMUSP00000016279	TRANSLATION	protein_coding	-	CCDS19887.1	1	238	12	0	2.7	63	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041132	N4bp2l1	ENSMUST00000201319	ENSMUSP00000144635	TRANSLATION	nonsense_mediated_decay	-	-	1	58	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041132	N4bp2l1	ENSMUST00000202031	ENSMUSP00000144164	TRANSLATION	protein_coding	-	-	1	134	1	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000072754	Lrcol1	ENSMUST00000185691	ENSMUSP00000139397	TRANSLATION	protein_coding	-	CCDS80364.1	1	161	0	0	0.5	117.2	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000072754	Lrcol1	ENSMUST00000190963	ENSMUSP00000140133	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	51.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072754	Lrcol1	ENSMUST00000186408	ENSMUSP00000140222	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000072754	Lrcol1	ENSMUST00000190060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072754	Lrcol1	ENSMUST00000100924	ENSMUSP00000098484	TRANSLATION	protein_coding	-	-	1	122	0	0	0	117.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000179059	ENSMUSP00000137557	TRANSLATION	protein_coding	-	CCDS51495.1	5	842	0	1.21	1.5	975.2	7	3,-2	-	-	10.986	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000087441	ENSMUSP00000084707	TRANSLATION	protein_coding	-	CCDS39082.1	1	858	0	1.21	1.5	974.5	7	3,-2	-	-	10.944	PRINCIPAL:3
ENSMUSG00000029086	Prom1	ENSMUST00000197749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029086	Prom1	ENSMUST00000197706	ENSMUSP00000142632	TRANSLATION	protein_coding	-	CCDS80275.1	1	804	0	0.94	0.5	916.6	7	3,-2	-	-	6.204	MINOR
ENSMUSG00000029086	Prom1	ENSMUST00000177946	ENSMUSP00000136483	TRANSLATION	protein_coding	-	CCDS51492.1	5	827	0	1.21	1.5	974.5	7	3,-2	-	-	10.944	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000198347	ENSMUSP00000142677	TRANSLATION	nonsense_mediated_decay	start	-	3	190	0	1.276	0	119.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029086	Prom1	ENSMUST00000197750	ENSMUSP00000142375	TRANSLATION	protein_coding	-	CCDS51493.1	1	834	0	1.21	1.5	974.5	7	3,-2	-	-	10.944	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000198218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029086	Prom1	ENSMUST00000196853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029086	Prom1	ENSMUST00000199739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029086	Prom1	ENSMUST00000087442	ENSMUSP00000084709	TRANSLATION	protein_coding	-	CCDS51493.1	1	834	0	1.21	1.5	974.5	7	3,-2	-	-	10.944	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000195942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029086	Prom1	ENSMUST00000030973	ENSMUSP00000030973	TRANSLATION	protein_coding	-	CCDS51491.1	1	809	0	0.94	0.5	928.6	7	3,-2	-	-	6.924	MINOR
ENSMUSG00000029086	Prom1	ENSMUST00000196852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029086	Prom1	ENSMUST00000196178	ENSMUSP00000143403	TRANSLATION	protein_coding	stop	-	5	98	0	0	0	51.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029086	Prom1	ENSMUST00000074113	ENSMUSP00000073751	TRANSLATION	protein_coding	-	CCDS51494.1	1	867	0	1.21	1.5	986.9	7	3,-2	-	-	11.688	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000171543	ENSMUSP00000128978	TRANSLATION	protein_coding	-	CCDS51495.1	1	842	0	1.21	1.5	975.2	7	3,-2	-	-	10.986	ALTERNATIVE:2
ENSMUSG00000029086	Prom1	ENSMUST00000196378	ENSMUSP00000142483	TRANSLATION	protein_coding	start	-	5	63	0	0	0	62.4	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000029086	Prom1	ENSMUST00000165909	ENSMUSP00000129909	TRANSLATION	protein_coding	-	CCDS51492.1	1	827	0	1.21	1.5	974.5	7	3,-2	-	-	10.944	ALTERNATIVE:2
ENSMUSG00000068082	Grxcr1	ENSMUST00000094715	ENSMUSP00000092305	TRANSLATION	protein_coding	-	CCDS19319.2	1	296	8	0.75	1.7	33.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029428	Stx2	ENSMUST00000195906	ENSMUSP00000142681	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	1.06	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029428	Stx2	ENSMUST00000149877	ENSMUSP00000118220	TRANSLATION	protein_coding	stop	-	3	85	0	2.66	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029428	Stx2	ENSMUST00000100680	ENSMUSP00000098247	TRANSLATION	protein_coding	-	CCDS71672.1	1	288	0	7.765	9.6	273	1	-4,-5	-	-	14.868	ALTERNATIVE:1
ENSMUSG00000029428	Stx2	ENSMUST00000141492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029428	Stx2	ENSMUST00000151712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029428	Stx2	ENSMUST00000144846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029428	Stx2	ENSMUST00000128448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029428	Stx2	ENSMUST00000031378	ENSMUSP00000031378	TRANSLATION	protein_coding	-	CCDS19692.1	1	289	0	7.69	8.1	275.2	1	-4,-5	-	-	14.328	PRINCIPAL:3
ENSMUSG00000029428	Stx2	ENSMUST00000199813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040254	Sema3d	ENSMUST00000196618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040254	Sema3d	ENSMUST00000196093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040254	Sema3d	ENSMUST00000197927	ENSMUSP00000142453	TRANSLATION	protein_coding	-	-	1	660	0	12.96	0	537.9	1	-4,-7	-	-	12	MINOR
ENSMUSG00000040254	Sema3d	ENSMUST00000030868	ENSMUSP00000030868	TRANSLATION	protein_coding	-	CCDS39013.1	1	777	0	12.87	7.5	537.9	1	-4,-7	-	-	14.82	PRINCIPAL:1
ENSMUSG00000040254	Sema3d	ENSMUST00000195923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029163	Emilin1	ENSMUST00000201169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029163	Emilin1	ENSMUST00000031055	ENSMUSP00000031055	TRANSLATION	protein_coding	-	CCDS19167.1	1	1017	0	2.664	6.3	132.8	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029163	Emilin1	ENSMUST00000202368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067365	Tmem128	ENSMUST00000128025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067365	Tmem128	ENSMUST00000087511	ENSMUSP00000084788	TRANSLATION	protein_coding	-	CCDS19254.1	1	163	0	0	3.9	0	4	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000067365	Tmem128	ENSMUST00000142277	ENSMUSP00000117712	TRANSLATION	protein_coding	start	-	3	68	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000067365	Tmem128	ENSMUST00000201661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067365	Tmem128	ENSMUST00000119047	ENSMUSP00000113758	TRANSLATION	protein_coding	-	CCDS19254.1	1	163	0	0	3.9	0	4	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000023106	Denr	ENSMUST00000198321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023106	Denr	ENSMUST00000171639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023106	Denr	ENSMUST00000168899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023106	Denr	ENSMUST00000023869	ENSMUSP00000023869	TRANSLATION	protein_coding	-	CCDS39275.1	1	198	2	0	13.8	61.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023106	Denr	ENSMUST00000166233	ENSMUSP00000126174	TRANSLATION	protein_coding	stop	-	3	182	2	0	0	61.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095503	Gm3147	ENSMUST00000180178	ENSMUSP00000137458	TRANSLATION	protein_coding	stop	-	5	407	0	0	0.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095503	Gm3147	ENSMUST00000201071	ENSMUSP00000144063	TRANSLATION	protein_coding	-	-	1	481	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000032867	Fbxw8	ENSMUST00000049474	ENSMUSP00000047012	TRANSLATION	protein_coding	-	CCDS19609.1	1	598	0	3.54	1.5	43.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032867	Fbxw8	ENSMUST00000201545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070420	Zscan25	ENSMUST00000199563	ENSMUSP00000143449	TRANSLATION	nonsense_mediated_decay	-	-	1	161	0	1	0	134	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070420	Zscan25	ENSMUST00000200246	ENSMUSP00000142367	TRANSLATION	protein_coding	stop	-	3	179	0	1	0	134	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070420	Zscan25	ENSMUST00000094116	ENSMUSP00000091664	TRANSLATION	protein_coding	-	CCDS39387.1	1	543	27	1.8	5.1	287.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029438	Bcl7a	ENSMUST00000117971	ENSMUSP00000113264	TRANSLATION	protein_coding	-	-	1	112	0	0	0	100.9	0	-4,-7	-	-	6	MINOR
ENSMUSG00000029438	Bcl7a	ENSMUST00000031391	ENSMUSP00000031391	TRANSLATION	protein_coding	-	CCDS19661.1	1	210	0	0	7.5	100.9	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029438	Bcl7a	ENSMUST00000120593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029283	Cdc7	ENSMUST00000031221	ENSMUSP00000031221	TRANSLATION	protein_coding	-	CCDS19498.1	1	564	21	5.15	1.5	154.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029283	Cdc7	ENSMUST00000123546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029283	Cdc7	ENSMUST00000140378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029283	Cdc7	ENSMUST00000199223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029283	Cdc7	ENSMUST00000129938	ENSMUSP00000119612	TRANSLATION	nonsense_mediated_decay	-	-	2	309	21	5.15	0	93.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029283	Cdc7	ENSMUST00000118261	ENSMUSP00000113385	TRANSLATION	protein_coding	-	CCDS19498.1	1	564	21	5.15	1.5	154.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029283	Cdc7	ENSMUST00000076467	ENSMUSP00000075792	TRANSLATION	protein_coding	-	CCDS71629.1	1	525	21	5.15	0.5	125.8	0	-4,-5	-	-	16.278	MINOR
ENSMUSG00000029283	Cdc7	ENSMUST00000117196	ENSMUSP00000112392	TRANSLATION	protein_coding	-	CCDS71628.1	1	532	21	5.15	1.5	154.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000043510	Hscb	ENSMUST00000145318	ENSMUSP00000120926	TRANSLATION	protein_coding	start	-	3	91	2	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043510	Hscb	ENSMUST00000056937	ENSMUSP00000062811	TRANSLATION	protein_coding	-	CCDS51613.1	1	234	5	5.15	1.5	67.6	0	-2,0	-	-	17	PRINCIPAL:1
ENSMUSG00000043510	Hscb	ENSMUST00000144850	ENSMUSP00000118876	TRANSLATION	nonsense_mediated_decay	start	-	5	37	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043510	Hscb	ENSMUST00000122921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117286	Gm1043	ENSMUST00000213782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117286	Gm1043	ENSMUST00000094840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117286	Gm1043	ENSMUST00000207619	ENSMUSP00000146423	TRANSLATION	protein_coding	start	-	5	306	0	0	0	275.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000117286	Gm1043	ENSMUST00000232332	ENSMUSP00000156188	TRANSLATION	protein_coding	-	-	-	1431	0	0	0	270.7	0	-4,-5	-	-	5.352	PRINCIPAL:1
ENSMUSG00000117286	Gm1043	ENSMUST00000208827	ENSMUSP00000147140	TRANSLATION	protein_coding	start	-	5	350	0	0	0	281.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029167	Ppargc1a	ENSMUST00000031059	ENSMUSP00000138397	TRANSLATION	nonsense_mediated_decay	-	-	1	270	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029167	Ppargc1a	ENSMUST00000151104	ENSMUSP00000116566	TRANSLATION	nonsense_mediated_decay	-	-	1	266	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029167	Ppargc1a	ENSMUST00000132734	ENSMUSP00000117040	TRANSLATION	protein_coding	-	CCDS19282.1	1	797	0	0.96	9.6	30.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000029167	Ppargc1a	ENSMUST00000127135	ENSMUSP00000115586	TRANSLATION	protein_coding	stop	-	5	142	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029167	Ppargc1a	ENSMUST00000196968	ENSMUSP00000143553	TRANSLATION	protein_coding	-	-	5	696	0	0	1.2	0	0	-4,-6	-	-	0.069	MINOR
ENSMUSG00000029723	Tsc22d4	ENSMUST00000100540	ENSMUSP00000098108	TRANSLATION	protein_coding	-	CCDS57393.1	1	509	0	0	0.5	266.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029723	Tsc22d4	ENSMUST00000138698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029723	Tsc22d4	ENSMUST00000110983	ENSMUSP00000106611	TRANSLATION	protein_coding	-	-	1	149	0	0	0	101.7	0	-4,-1	-	-	0	MINOR
ENSMUSG00000029723	Tsc22d4	ENSMUST00000129349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029723	Tsc22d4	ENSMUST00000110985	ENSMUSP00000106613	TRANSLATION	protein_coding	-	-	2	168	0	1	1.2	99.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000029723	Tsc22d4	ENSMUST00000141733	ENSMUSP00000120835	TRANSLATION	protein_coding	start	-	2	96	0	1	0	99.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029723	Tsc22d4	ENSMUST00000031738	ENSMUSP00000031738	TRANSLATION	protein_coding	-	-	3	210	0	0	0	266.8	0	-4,-1	-	-	6	MINOR
ENSMUSG00000029723	Tsc22d4	ENSMUST00000129399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029723	Tsc22d4	ENSMUST00000100539	ENSMUSP00000098107	TRANSLATION	protein_coding	-	CCDS19776.1	1	387	0	1	1.5	99.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000059991	Nptx2	ENSMUST00000071782	ENSMUSP00000071687	TRANSLATION	protein_coding	-	CCDS19849.1	1	429	6	2.08	2.7	114.7	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000070639	Lrrc8b	ENSMUST00000112707	ENSMUSP00000108327	TRANSLATION	protein_coding	-	CCDS39193.1	1	803	0	1	6.3	492.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000029595	Lhx5	ENSMUST00000031591	ENSMUSP00000031591	TRANSLATION	protein_coding	-	CCDS19617.1	1	402	16	3.2	13.7	192.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000055204	Ankrd17	ENSMUST00000199096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000218526	ENSMUSP00000151446	TRANSLATION	protein_coding	stop	-	5	1600	0	15.54	0	477.4	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000055204	Ankrd17	ENSMUST00000197327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000168058	ENSMUSP00000128960	TRANSLATION	protein_coding	-	-	5	2602	0	15.38	0.5	532.5	0	-3,-4	-	-	11.682	ALTERNATIVE:2
ENSMUSG00000055204	Ankrd17	ENSMUST00000196919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000202226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000014421	ENSMUSP00000014421	TRANSLATION	protein_coding	-	CCDS57354.1	5	2603	0	15.54	0.5	532.5	0	-3,-4	-	-	12	PRINCIPAL:4
ENSMUSG00000055204	Ankrd17	ENSMUST00000199965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000197021	ENSMUSP00000142575	TRANSLATION	protein_coding	-	-	5	2494	0	15.54	0.5	532.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000055204	Ankrd17	ENSMUST00000081914	ENSMUSP00000080587	TRANSLATION	protein_coding	-	CCDS57353.1	5	2352	0	15.54	0.5	532.5	0	-3,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000055204	Ankrd17	ENSMUST00000197037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000200012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000199424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055204	Ankrd17	ENSMUST00000199905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106627	Gm21680	ENSMUST00000200447	ENSMUSP00000143671	TRANSLATION	protein_coding	-	-	5	267	0	0	0.5	82.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000096798	Gm6309	ENSMUST00000174320	ENSMUSP00000134203	TRANSLATION	protein_coding	-	-	5	315	0	0	0.5	28.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000039917	Rhbdd2	ENSMUST00000084599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039917	Rhbdd2	ENSMUST00000136748	ENSMUSP00000119069	TRANSLATION	nonsense_mediated_decay	-	-	1	97	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000039917	Rhbdd2	ENSMUST00000130647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039917	Rhbdd2	ENSMUST00000199368	ENSMUSP00000143780	TRANSLATION	nonsense_mediated_decay	start	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039917	Rhbdd2	ENSMUST00000043707	ENSMUSP00000049060	TRANSLATION	protein_coding	-	CCDS19743.1	1	361	0	0	7.5	75.3	0	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039917	Rhbdd2	ENSMUST00000144633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039917	Rhbdd2	ENSMUST00000129134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015804	Med28	ENSMUST00000119579	ENSMUSP00000112418	TRANSLATION	protein_coding	-	-	3	118	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000015804	Med28	ENSMUST00000139586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015804	Med28	ENSMUST00000015948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015804	Med28	ENSMUST00000156481	ENSMUSP00000115882	TRANSLATION	protein_coding	-	CCDS19275.1	1	178	0	0	6.3	64.3	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000015804	Med28	ENSMUST00000118833	ENSMUSP00000113027	TRANSLATION	protein_coding	-	-	2	82	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000044134	Pheta1	ENSMUST00000198271	ENSMUSP00000143110	TRANSLATION	protein_coding	-	CCDS19642.1	1	266	8	0.6	0.5	64.5	0	-4,-5	-	-	16.5	PRINCIPAL:1
ENSMUSG00000044134	Pheta1	ENSMUST00000198155	ENSMUSP00000143324	TRANSLATION	protein_coding	stop	-	2	102	8	0.8	0	53.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044134	Pheta1	ENSMUST00000056654	ENSMUSP00000062386	TRANSLATION	protein_coding	-	CCDS19642.1	1	266	8	0.6	0.5	64.5	0	-4,-5	-	-	16.5	PRINCIPAL:1
ENSMUSG00000029126	Nsg1	ENSMUST00000202129	ENSMUSP00000144182	TRANSLATION	protein_coding	start	-	3	52	0	0	0	50.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029126	Nsg1	ENSMUST00000201341	ENSMUSP00000144641	TRANSLATION	protein_coding	stop	-	2	117	0	0	0	189.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029126	Nsg1	ENSMUST00000201415	ENSMUSP00000143921	TRANSLATION	protein_coding	-	-	5	146	0	0	0	202.7	1	-4,-6	-	-	1.092	MINOR
ENSMUSG00000029126	Nsg1	ENSMUST00000031009	ENSMUSP00000031009	TRANSLATION	protein_coding	-	CCDS19251.1	1	185	0	0	14.5	284.5	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000029126	Nsg1	ENSMUST00000201363	ENSMUSP00000144396	TRANSLATION	protein_coding	-	CCDS19251.1	2	185	0	0	14.5	284.5	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000029126	Nsg1	ENSMUST00000202831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029126	Nsg1	ENSMUST00000201134	ENSMUSP00000144585	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041827	Oasl1	ENSMUST00000031540	ENSMUSP00000031540	TRANSLATION	protein_coding	-	CCDS19575.1	1	511	1	5.3	1.5	313	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041827	Oasl1	ENSMUST00000112143	ENSMUSP00000107771	TRANSLATION	protein_coding	-	CCDS19575.1	1	511	1	5.3	1.5	313	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041827	Oasl1	ENSMUST00000152329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041827	Oasl1	ENSMUST00000140159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041827	Oasl1	ENSMUST00000155274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041827	Oasl1	ENSMUST00000155394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039533	Mmd2	ENSMUST00000195947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039533	Mmd2	ENSMUST00000196972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039533	Mmd2	ENSMUST00000037048	ENSMUSP00000039357	TRANSLATION	protein_coding	-	CCDS39363.1	1	247	0	0	3.5	66.4	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000029714	Gigyf1	ENSMUST00000197624	ENSMUSP00000143670	TRANSLATION	protein_coding	stop	-	5	229	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029714	Gigyf1	ENSMUST00000031727	ENSMUSP00000031727	TRANSLATION	protein_coding	-	CCDS51673.1	1	1044	0	0.88	0.5	70.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004455	Ppp1cc	ENSMUST00000102528	ENSMUSP00000099587	TRANSLATION	protein_coding	-	CCDS19643.1	1	323	10	7.57	17	222.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004455	Ppp1cc	ENSMUST00000132555	ENSMUSP00000143509	TRANSLATION	nonsense_mediated_decay	-	-	1	273	10	5.49	0	222.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000133568	ENSMUSP00000143006	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000197730	ENSMUSP00000143146	TRANSLATION	protein_coding	start	-	5	292	9	5.91	0	168.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000128309	ENSMUSP00000142415	TRANSLATION	nonsense_mediated_decay	-	-	1	273	10	5.49	0	222.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000151184	ENSMUSP00000142623	TRANSLATION	nonsense_mediated_decay	start	-	5	27	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000135090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004455	Ppp1cc	ENSMUST00000142562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004455	Ppp1cc	ENSMUST00000086294	ENSMUSP00000083474	TRANSLATION	protein_coding	-	-	1	337	10	7.24	7.6	222.5	0	-4,-5	-	-	18.988	MINOR
ENSMUSG00000004455	Ppp1cc	ENSMUST00000134719	ENSMUSP00000142700	TRANSLATION	nonsense_mediated_decay	start	-	3	26	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075569	Rsph10b	ENSMUST00000169758	ENSMUSP00000127770	TRANSLATION	protein_coding	stop	-	5	234	0	0	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075569	Rsph10b	ENSMUST00000164604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075569	Rsph10b	ENSMUST00000031618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075569	Rsph10b	ENSMUST00000166847	ENSMUSP00000132687	TRANSLATION	protein_coding	-	-	5	876	3	0.64	0	180.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075569	Rsph10b	ENSMUST00000212711	ENSMUSP00000148444	TRANSLATION	protein_coding	start	-	5	453	3	0.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043323	Fbrsl1	ENSMUST00000069483	ENSMUSP00000063879	TRANSLATION	protein_coding	-	CCDS51609.1	5	1031	0	0	0.5	307.3	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000043323	Fbrsl1	ENSMUST00000200293	ENSMUSP00000143446	TRANSLATION	protein_coding	stop	-	2	213	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043323	Fbrsl1	ENSMUST00000198768	ENSMUSP00000142379	TRANSLATION	protein_coding	-	-	3	1008	0	0	0	307.3	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000043323	Fbrsl1	ENSMUST00000196801	ENSMUSP00000142625	TRANSLATION	nonsense_mediated_decay	-	-	2	497	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043323	Fbrsl1	ENSMUST00000198834	ENSMUSP00000143147	TRANSLATION	protein_coding	-	-	1	617	0	0	0	307.3	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000043323	Fbrsl1	ENSMUST00000056124	ENSMUSP00000054613	TRANSLATION	protein_coding	-	CCDS39211.1	2	593	0	0	0.5	248.7	0	-4,-6	-	-	2.484	MINOR
ENSMUSG00000043323	Fbrsl1	ENSMUST00000198415	ENSMUSP00000158851	TRANSLATION	protein_coding	-	-	-	452	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028949	Smarcd3	ENSMUST00000145565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028949	Smarcd3	ENSMUST00000147857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028949	Smarcd3	ENSMUST00000144518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028949	Smarcd3	ENSMUST00000030791	ENSMUSP00000030791	TRANSLATION	protein_coding	-	CCDS19126.1	1	483	0	2	8.8	73.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000028949	Smarcd3	ENSMUST00000199393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028949	Smarcd3	ENSMUST00000195943	ENSMUSP00000143437	TRANSLATION	protein_coding	-	-	5	454	0	2	1.2	73.3	0	-4,-7	-	-	12.078	MINOR
ENSMUSG00000028949	Smarcd3	ENSMUST00000140744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028949	Smarcd3	ENSMUST00000144995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028949	Smarcd3	ENSMUST00000143501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079451	Tmprss11g	ENSMUST00000134179	ENSMUSP00000122709	TRANSLATION	protein_coding	-	CCDS51532.1	1	417	6	4	2.7	311	1	-2,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000079451	Tmprss11g	ENSMUST00000199703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079451	Tmprss11g	ENSMUST00000140095	ENSMUSP00000115540	TRANSLATION	protein_coding	-	-	5	404	6	4	0	311	1	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000063447	Ube2d2b	ENSMUST00000072578	ENSMUSP00000072387	TRANSLATION	protein_coding	-	CCDS71632.1	-	147	0	1	19.5	180.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000008090	Fgfrl1	ENSMUST00000112560	ENSMUSP00000108179	TRANSLATION	protein_coding	-	CCDS51592.1	1	438	0	1.965	0.5	98.5	1	4,-1	-	-	5.988	MINOR
ENSMUSG00000008090	Fgfrl1	ENSMUST00000013633	ENSMUSP00000013633	TRANSLATION	protein_coding	-	CCDS19518.1	1	529	0	3.349	1.5	152.6	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000008090	Fgfrl1	ENSMUST00000197255	ENSMUSP00000142430	TRANSLATION	protein_coding	stop	-	2	40	0	0.45	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000008090	Fgfrl1	ENSMUST00000199802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008090	Fgfrl1	ENSMUST00000196222	ENSMUSP00000143037	TRANSLATION	protein_coding	stop	-	3	106	0	1.57	0	55.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000098947	V1rg10	ENSMUST00000183378	ENSMUSP00000158950	TRANSLATION	polymorphic_pseudogene	-	-	-	68	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000075598	Smok3c	ENSMUST00000110967	ENSMUSP00000141020	TRANSLATION	protein_coding	-	CCDS80444.1	1	504	17	0.6	0.5	239.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000075598	Smok3c	ENSMUST00000178402	ENSMUSP00000140749	TRANSLATION	protein_coding	-	CCDS80444.1	-	504	17	0.6	0.5	239.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000073116	Gm10471	ENSMUST00000094946	ENSMUSP00000092553	TRANSLATION	protein_coding	-	CCDS80236.1	5	252	0	0	0.5	85.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000098140	Gm26938	ENSMUST00000182839	ENSMUSP00000138120	TRANSLATION	protein_coding,RT	stop	-	3	226	0	1	0	152.2	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000067274	Rplp0	ENSMUST00000152976	ENSMUSP00000114332	TRANSLATION	protein_coding	stop	-	2	145	0	3.05	0	77.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067274	Rplp0	ENSMUST00000156359	ENSMUSP00000138289	TRANSLATION	protein_coding	stop	-	5	221	0	4.33	0	47.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000067274	Rplp0	ENSMUST00000086519	ENSMUSP00000083705	TRANSLATION	protein_coding	-	CCDS19594.1	1	317	0	6.18	10.8	155.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000067274	Rplp0	ENSMUST00000155584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029359	Tesc	ENSMUST00000151792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029359	Tesc	ENSMUST00000148777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029359	Tesc	ENSMUST00000145526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029359	Tesc	ENSMUST00000135540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029359	Tesc	ENSMUST00000031304	ENSMUSP00000031304	TRANSLATION	protein_coding	-	CCDS19608.1	1	214	5	4.0048	3.9	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029359	Tesc	ENSMUST00000124648	ENSMUSP00000138436	TRANSLATION	nonsense_mediated_decay	-	-	1	163	5	2.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005107	Slc2a9	ENSMUST00000122970	ENSMUSP00000117390	TRANSLATION	nonsense_mediated_decay	-	-	1	281	0	5.99	0	170.6	21	-4,-6	-	-	-1	MINOR
ENSMUSG00000005107	Slc2a9	ENSMUST00000067872	ENSMUSP00000066872	TRANSLATION	protein_coding	-	CCDS51484.1	1	523	0	10.778	1.5	351.6	40	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000005107	Slc2a9	ENSMUST00000140462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005107	Slc2a9	ENSMUST00000155634	ENSMUSP00000116354	TRANSLATION	protein_coding	-	CCDS51484.1	5	523	0	10.778	1.5	351.6	40	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000005107	Slc2a9	ENSMUST00000156076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005107	Slc2a9	ENSMUST00000129099	ENSMUSP00000122723	TRANSLATION	protein_coding	-	CCDS51484.1	5	523	0	10.778	1.5	351.6	40	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000005107	Slc2a9	ENSMUST00000144290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005107	Slc2a9	ENSMUST00000067886	ENSMUSP00000063352	TRANSLATION	protein_coding	-	CCDS51483.1	1	538	0	10.578	0.5	351.6	40	-4,-6	-	-	11.598	PRINCIPAL:4
ENSMUSG00000005107	Slc2a9	ENSMUST00000156272	ENSMUSP00000144374	TRANSLATION	protein_coding	stop	-	5	158	0	2.958	0	35.5	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000005107	Slc2a9	ENSMUST00000147664	ENSMUSP00000119586	TRANSLATION	protein_coding	stop	-	2	144	0	3.53	0	82.1	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000005107	Slc2a9	ENSMUST00000143758	ENSMUSP00000118430	TRANSLATION	protein_coding	-	CCDS51482.1	1	431	0	8.578	0.5	254.5	35	-4,-6	-	-	1.776	MINOR
ENSMUSG00000005107	Slc2a9	ENSMUST00000005238	ENSMUSP00000005238	TRANSLATION	protein_coding	-	CCDS19256.1	1	416	0	8.778	0.5	254.5	35	-4,-6	-	-	2.172	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000088392	ENSMUSP00000085734	TRANSLATION	protein_coding	-	CCDS39024.1	1	682	20	11.36	0.5	144.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062604	Srpk2	ENSMUST00000197622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062604	Srpk2	ENSMUST00000198661	ENSMUSP00000142494	TRANSLATION	protein_coding	stop	-	2	57	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000197985	ENSMUSP00000142554	TRANSLATION	protein_coding	stop	-	3	129	10	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000198549	ENSMUSP00000142781	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000196592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062604	Srpk2	ENSMUST00000196929	ENSMUSP00000143216	TRANSLATION	nonsense_mediated_decay	-	-	1	156	11	4.25	0	62.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000200173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062604	Srpk2	ENSMUST00000196388	ENSMUSP00000143453	TRANSLATION	protein_coding	stop	-	3	134	10	3.75	0	62.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062604	Srpk2	ENSMUST00000198719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000196094	ENSMUSP00000143380	TRANSLATION	nonsense_mediated_decay	start	-	5	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029512	Ulk1	ENSMUST00000198561	ENSMUSP00000143308	TRANSLATION	nonsense_mediated_decay	start	-	5	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029512	Ulk1	ENSMUST00000198470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000197768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000200299	ENSMUSP00000143536	TRANSLATION	protein_coding	-	CCDS84930.1	1	1057	19	8.26	1.5	314.7	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000029512	Ulk1	ENSMUST00000200099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000196883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000031490	ENSMUSP00000031490	TRANSLATION	protein_coding	-	CCDS19532.1	1	1051	19	8.26	3.9	314.7	0	-4,-5	-	-	19	PRINCIPAL:3
ENSMUSG00000029512	Ulk1	ENSMUST00000199717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029512	Ulk1	ENSMUST00000196440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029512	Ulk1	ENSMUST00000199568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000094641	ENSMUSP00000092225	TRANSLATION	protein_coding	-	CCDS51534.1	1	313	0	0	0.5	75.9	0	3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000070702	Csn1s1	ENSMUST00000200344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000196500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000198432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000199506	ENSMUSP00000143694	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070702	Csn1s1	ENSMUST00000197157	ENSMUSP00000142839	TRANSLATION	nonsense_mediated_decay	start	-	3	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070702	Csn1s1	ENSMUST00000200567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000197788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000197794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000197631	ENSMUSP00000142794	TRANSLATION	protein_coding	-	CCDS80314.1	1	294	0	0	0.5	40.9	0	3,-4	-	-	3.234	MINOR
ENSMUSG00000070702	Csn1s1	ENSMUST00000198293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000196380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000199533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070702	Csn1s1	ENSMUST00000197911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062438	Adam1b	ENSMUST00000079368	ENSMUSP00000078343	TRANSLATION	protein_coding	-	CCDS19636.1	-	806	18	0.4	0.5	452.9	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000032754	Slc8b1	ENSMUST00000123326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032754	Slc8b1	ENSMUST00000147496	ENSMUSP00000120947	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032754	Slc8b1	ENSMUST00000140329	ENSMUSP00000117260	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032754	Slc8b1	ENSMUST00000076051	ENSMUSP00000075428	TRANSLATION	protein_coding	-	CCDS51633.1	1	552	0	0	0.5	111.4	12	3,-2	-	-	2.142	MINOR
ENSMUSG00000032754	Slc8b1	ENSMUST00000068326	ENSMUSP00000064714	TRANSLATION	protein_coding	-	CCDS39238.1	1	585	0	0	3.9	175.7	17	3,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000032754	Slc8b1	ENSMUST00000111890	ENSMUSP00000107521	TRANSLATION	protein_coding	-	CCDS51634.1	1	568	0	0	0.5	139.7	17	3,-2	-	-	3.84	MINOR
ENSMUSG00000032754	Slc8b1	ENSMUST00000111889	ENSMUSP00000107520	TRANSLATION	protein_coding	-	-	5	529	0	0	0	160	14	3,-2	-	-	5.058	MINOR
ENSMUSG00000039968	Rsbn1l	ENSMUST00000196780	ENSMUSP00000142789	TRANSLATION	protein_coding	-	-	1	616	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039968	Rsbn1l	ENSMUST00000197493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039968	Rsbn1l	ENSMUST00000197089	ENSMUSP00000142461	TRANSLATION	protein_coding	stop	-	1	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039968	Rsbn1l	ENSMUST00000036489	ENSMUSP00000039482	TRANSLATION	protein_coding	-	CCDS39020.1	5	821	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000013629	Cad	ENSMUST00000013773	ENSMUSP00000013773	TRANSLATION	protein_coding	-	CCDS19171.1	1	2225	63	39.96	7.5	1206	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000013629	Cad	ENSMUST00000201844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000202795	ENSMUSP00000144009	TRANSLATION	protein_coding	-	CCDS80245.1	1	2164	59	38.96	0.5	1084.5	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000013629	Cad	ENSMUST00000201870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000202967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000200917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000201182	ENSMUSP00000144684	TRANSLATION	protein_coding	-	CCDS80246.1	1	2154	59	38.63	0.5	1085.8	0	-4,-5	-	-	6.678	MINOR
ENSMUSG00000013629	Cad	ENSMUST00000202827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000202973	ENSMUSP00000144679	TRANSLATION	protein_coding	start/stop	-	3	194	0	3.55	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013629	Cad	ENSMUST00000202227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013629	Cad	ENSMUST00000201838	ENSMUSP00000144127	TRANSLATION	protein_coding	-	-	1	971	40	15.95	0	739.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000013629	Cad	ENSMUST00000200953	ENSMUSP00000144307	TRANSLATION	protein_coding	-	-	5	2162	60	38.96	1.2	1086.5	0	-4,-5	-	-	8.097	MINOR
ENSMUSG00000013629	Cad	ENSMUST00000201256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013629	Cad	ENSMUST00000202391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042121	Ssh1	ENSMUST00000159510	ENSMUSP00000125025	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042121	Ssh1	ENSMUST00000162322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042121	Ssh1	ENSMUST00000112298	ENSMUSP00000107917	TRANSLATION	protein_coding	-	-	1	1020	8	3.22	0	170.3	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000042121	Ssh1	ENSMUST00000162396	ENSMUSP00000125388	TRANSLATION	protein_coding	start	-	3	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042121	Ssh1	ENSMUST00000077689	ENSMUSP00000076873	TRANSLATION	protein_coding	-	-	1	999	8	3.22	0.5	170.3	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000042121	Ssh1	ENSMUST00000159592	ENSMUSP00000124312	TRANSLATION	protein_coding	-	CCDS19556.1	1	1042	8	3.22	0.5	170.3	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000029185	Fam114a1	ENSMUST00000031080	ENSMUSP00000031080	TRANSLATION	protein_coding	-	CCDS19304.1	1	569	0	0	1.5	206.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029185	Fam114a1	ENSMUST00000139366	ENSMUSP00000119284	TRANSLATION	protein_coding	stop	-	5	176	0	0	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029642	Polr1d	ENSMUST00000110557	ENSMUSP00000106186	TRANSLATION	protein_coding	-	CCDS39397.1	1	126	0	0.066	3.9	0	0	-4,-5	-	-	1.426	MINOR
ENSMUSG00000029642	Polr1d	ENSMUST00000202444	ENSMUSP00000144455	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029642	Polr1d	ENSMUST00000196288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029642	Polr1d	ENSMUST00000200993	ENSMUSP00000144185	TRANSLATION	protein_coding	-	-	5	33	0	0.066	0	0	0	-4,-5	-	-	0.372	MINOR
ENSMUSG00000029642	Polr1d	ENSMUST00000050970	ENSMUSP00000058355	TRANSLATION	protein_coding	-	CCDS19876.1	1	133	0	1.066	6.5	93.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029642	Polr1d	ENSMUST00000201007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013495	Tmem175	ENSMUST00000078323	ENSMUSP00000077437	TRANSLATION	protein_coding	-	CCDS19514.1	1	499	0	0	1.5	152.9	13	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013495	Tmem175	ENSMUST00000200485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013495	Tmem175	ENSMUST00000063272	ENSMUSP00000068607	TRANSLATION	protein_coding	-	CCDS19514.1	1	499	0	0	1.5	152.9	13	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013495	Tmem175	ENSMUST00000120327	ENSMUSP00000112780	TRANSLATION	protein_coding	-	CCDS19514.1	5	499	0	0	1.5	152.9	13	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013495	Tmem175	ENSMUST00000198346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013495	Tmem175	ENSMUST00000146207	ENSMUSP00000143596	TRANSLATION	protein_coding	-	-	1	232	0	0	0	70.7	9	-4,-5	-	-	1.068	MINOR
ENSMUSG00000048764	Tmprss11f	ENSMUST00000161625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048764	Tmprss11f	ENSMUST00000173259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048764	Tmprss11f	ENSMUST00000116553	ENSMUSP00000112252	TRANSLATION	protein_coding	-	CCDS39125.1	1	439	6	4	5.1	302.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000062077	Trim54	ENSMUST00000013771	ENSMUSP00000013771	TRANSLATION	protein_coding	-	CCDS19173.1	1	366	15	3.1	5.1	66.4	0	-4,-6	-	-	19.548	PRINCIPAL:2
ENSMUSG00000062077	Trim54	ENSMUST00000202769	ENSMUSP00000144629	TRANSLATION	protein_coding	-	-	5	364	15	3.1	6.3	66.4	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000038803	Ost4	ENSMUST00000132253	ENSMUSP00000128352	TRANSLATION	protein_coding	-	CCDS39049.1	1	37	0	1	14.1	63.8	1	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038803	Ost4	ENSMUST00000132034	ENSMUSP00000126221	TRANSLATION	protein_coding	-	CCDS39049.1	1	37	0	1	14.1	63.8	1	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036323	Srp72	ENSMUST00000141873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000144741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000146167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000125732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000148423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000120550	ENSMUSP00000113312	TRANSLATION	protein_coding	-	-	5	610	0	7.5	0	94.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000036323	Srp72	ENSMUST00000150661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036323	Srp72	ENSMUST00000101087	ENSMUSP00000098648	TRANSLATION	protein_coding	-	CCDS39119.1	2	671	0	7.5	1.5	94.7	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000036323	Srp72	ENSMUST00000132860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035836	Ugt2b1	ENSMUST00000031183	ENSMUSP00000031183	TRANSLATION	protein_coding	-	CCDS19382.1	1	529	15	3.64	1.7	855.9	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000038770	Kpna7	ENSMUST00000110673	ENSMUSP00000106301	TRANSLATION	protein_coding	-	CCDS84996.1	5	520	0	7.725	0.5	286.5	0	-4,-6	-	-	11.136	ALTERNATIVE:2
ENSMUSG00000038770	Kpna7	ENSMUST00000116454	ENSMUSP00000112155	TRANSLATION	protein_coding	-	CCDS19852.1	1	499	0	8.1	0.5	288.4	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000038770	Kpna7	ENSMUST00000110672	ENSMUSP00000106300	TRANSLATION	protein_coding	-	CCDS19852.1	1	499	0	8.1	0.5	288.4	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000038770	Kpna7	ENSMUST00000151196	ENSMUSP00000120277	TRANSLATION	protein_coding	stop	-	5	38	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038770	Kpna7	ENSMUST00000139024	ENSMUSP00000121515	TRANSLATION	protein_coding	stop	-	5	166	0	2.6	0	113.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038770	Kpna7	ENSMUST00000142866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038859	Baiap2l1	ENSMUST00000129287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038859	Baiap2l1	ENSMUST00000055190	ENSMUSP00000053129	TRANSLATION	protein_coding	-	CCDS39378.1	1	514	0	7.6	1.5	252.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037007	Zfp113	ENSMUST00000049393	ENSMUSP00000041796	TRANSLATION	protein_coding	-	CCDS19791.1	1	439	32	0.8	0.5	279	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037007	Zfp113	ENSMUST00000132318	ENSMUSP00000116846	TRANSLATION	protein_coding	-	-	3	57	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037007	Zfp113	ENSMUST00000144786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037007	Zfp113	ENSMUST00000165640	ENSMUSP00000127561	TRANSLATION	protein_coding	-	CCDS19791.1	1	439	32	0.8	0.5	279	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042594	Sh2b3	ENSMUST00000118580	ENSMUSP00000113808	TRANSLATION	protein_coding	-	CCDS84952.1	2	538	0	5.49	0.5	143.2	0	-4,-2	-	-	11.604	ALTERNATIVE:2
ENSMUSG00000042594	Sh2b3	ENSMUST00000136960	ENSMUSP00000119086	TRANSLATION	nonsense_mediated_decay	-	-	2	370	0	2.74	0	92	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042594	Sh2b3	ENSMUST00000086310	ENSMUSP00000083490	TRANSLATION	protein_coding	-	CCDS19641.1	1	548	0	5.688	0.5	143.2	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000042594	Sh2b3	ENSMUST00000040308	ENSMUSP00000041611	TRANSLATION	protein_coding	-	CCDS19641.1	1	548	0	5.688	0.5	143.2	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000042594	Sh2b3	ENSMUST00000197892	ENSMUSP00000142666	TRANSLATION	protein_coding	stop	-	3	250	0	2.14	0	66.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042594	Sh2b3	ENSMUST00000198161	ENSMUSP00000143505	TRANSLATION	protein_coding	start	-	3	102	3	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000042594	Sh2b3	ENSMUST00000122426	ENSMUSP00000113926	TRANSLATION	protein_coding	-	CCDS19641.1	1	548	0	5.688	0.5	143.2	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000042594	Sh2b3	ENSMUST00000137682	ENSMUSP00000118523	TRANSLATION	protein_coding	stop	-	3	160	0	0	0	66.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029245	Epha5	ENSMUST00000155469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029245	Epha5	ENSMUST00000200076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029245	Epha5	ENSMUST00000113403	ENSMUSP00000109030	TRANSLATION	protein_coding	-	-	5	1040	19	13.15	1.5	819.7	2	-1,-4	-	-	17.478	PRINCIPAL:5
ENSMUSG00000029245	Epha5	ENSMUST00000154804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029245	Epha5	ENSMUST00000136775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029245	Epha5	ENSMUST00000113398	ENSMUSP00000109025	TRANSLATION	protein_coding	-	-	5	894	19	12.15	1	725.1	2	-1,-4	-	-	10.002	MINOR
ENSMUSG00000029245	Epha5	ENSMUST00000113401	ENSMUSP00000109028	TRANSLATION	protein_coding	-	-	1	819	19	10.55	0	733.8	2	-1,-4	-	-	7.122	MINOR
ENSMUSG00000029245	Epha5	ENSMUST00000053733	ENSMUSP00000060646	TRANSLATION	protein_coding	-	CCDS19376.1	1	876	19	11.15	1.5	767.8	2	-1,-4	-	-	10.362	MINOR
ENSMUSG00000029245	Epha5	ENSMUST00000113406	ENSMUSP00000109033	TRANSLATION	protein_coding	-	-	5	1017	19	12.55	1.5	828.4	2	-1,-4	-	-	16.8	ALTERNATIVE:2
ENSMUSG00000029245	Epha5	ENSMUST00000113399	ENSMUSP00000109026	TRANSLATION	protein_coding	-	-	5	1006	19	13.15	0	777	2	-1,-4	-	-	14.916	MINOR
ENSMUSG00000029245	Epha5	ENSMUST00000152573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040464	Gtpbp10	ENSMUST00000088842	ENSMUSP00000086225	TRANSLATION	protein_coding	-	-	5	287	18	4.62	0	68.3	0	-4,-7	-	-	10.272	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000152984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040464	Gtpbp10	ENSMUST00000128887	ENSMUSP00000121101	TRANSLATION	nonsense_mediated_decay	start	-	3	116	6	1.205	0	34.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000119521	ENSMUSP00000113648	TRANSLATION	protein_coding	stop	-	5	241	10	3.91	0	84.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000115441	ENSMUSP00000111101	TRANSLATION	protein_coding	-	CCDS39006.1	1	366	20	5.66	1.5	140.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000040464	Gtpbp10	ENSMUST00000198799	ENSMUSP00000143003	TRANSLATION	protein_coding	-	-	-	44	0	0	0	0	0	-2,0	-	-	0	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000198421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040464	Gtpbp10	ENSMUST00000147244	ENSMUSP00000119250	TRANSLATION	nonsense_mediated_decay	-	-	5	76	4	0.63	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000127670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040464	Gtpbp10	ENSMUST00000126855	ENSMUSP00000118395	TRANSLATION	nonsense_mediated_decay	start	-	5	78	4	0.63	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040464	Gtpbp10	ENSMUST00000152950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036948	Map11	ENSMUST00000159649	ENSMUSP00000125208	TRANSLATION	protein_coding	-	-	1	311	0	0	3.6	564.5	0	-4,-5	-	-	1.2	MINOR
ENSMUSG00000036948	Map11	ENSMUST00000159146	ENSMUSP00000123724	TRANSLATION	protein_coding	start	-	3	59	0	0	0	41.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036948	Map11	ENSMUST00000159872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036948	Map11	ENSMUST00000159534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036948	Map11	ENSMUST00000162632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036948	Map11	ENSMUST00000159123	ENSMUSP00000137679	TRANSLATION	nonsense_mediated_decay	-	-	5	169	0	0	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036948	Map11	ENSMUST00000048421	ENSMUSP00000046898	TRANSLATION	protein_coding	-	CCDS39343.2	1	580	0	0	7.5	824.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000055991	Zkscan5	ENSMUST00000162168	ENSMUSP00000124171	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055991	Zkscan5	ENSMUST00000161881	ENSMUSP00000124544	TRANSLATION	protein_coding	start/stop	-	3	148	0	0	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055991	Zkscan5	ENSMUST00000031601	ENSMUSP00000031601	TRANSLATION	protein_coding	-	CCDS51697.1	1	746	48	2.22	0.5	352.7	0	-4,-5	-	-	15.996	MINOR
ENSMUSG00000055991	Zkscan5	ENSMUST00000161896	ENSMUSP00000124838	TRANSLATION	nonsense_mediated_decay	-	-	3	219	0	1	0	137.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055991	Zkscan5	ENSMUST00000160162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055991	Zkscan5	ENSMUST00000085671	ENSMUSP00000082814	TRANSLATION	protein_coding	-	CCDS39386.1	1	819	48	2.22	0.5	386.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029334	Prkg2	ENSMUST00000031277	ENSMUSP00000031277	TRANSLATION	protein_coding	-	-	5	733	27	14.79	3.6	351.9	0	-4,-5	-	-	12.114	MINOR
ENSMUSG00000029334	Prkg2	ENSMUST00000162147	ENSMUSP00000143708	TRANSLATION	protein_coding	-	-	1	107	0	2.95	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029334	Prkg2	ENSMUST00000161490	ENSMUSP00000124963	TRANSLATION	protein_coding	-	CCDS19459.1	1	762	34	15.54	7.5	367.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029334	Prkg2	ENSMUST00000162619	ENSMUSP00000142743	TRANSLATION	protein_coding	-	-	5	94	0	2.55	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000029334	Prkg2	ENSMUST00000160765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053581	Zfand2a	ENSMUST00000110851	ENSMUSP00000106475	TRANSLATION	protein_coding	-	CCDS19812.1	1	171	20	2.3	1.5	90	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053581	Zfand2a	ENSMUST00000150992	ENSMUSP00000123097	TRANSLATION	protein_coding	stop	-	5	89	11	1.3	0	49.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053581	Zfand2a	ENSMUST00000079996	ENSMUSP00000078910	TRANSLATION	protein_coding	-	CCDS19812.1	1	171	20	2.3	1.5	90	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053581	Zfand2a	ENSMUST00000143889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053581	Zfand2a	ENSMUST00000132454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029591	Ung	ENSMUST00000200479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029591	Ung	ENSMUST00000143455	ENSMUSP00000142484	TRANSLATION	nonsense_mediated_decay	-	-	5	132	0	1.6	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029591	Ung	ENSMUST00000137402	ENSMUSP00000114140	TRANSLATION	protein_coding	stop	-	5	185	10	4.566	0	79.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029591	Ung	ENSMUST00000031587	ENSMUSP00000031587	TRANSLATION	protein_coding	-	CCDS39221.1	1	306	10	5.85	0.5	86.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000029591	Ung	ENSMUST00000112275	ENSMUSP00000107894	TRANSLATION	protein_coding	-	-	1	199	10	5.25	0	86.8	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000029591	Ung	ENSMUST00000102584	ENSMUSP00000099644	TRANSLATION	protein_coding	-	CCDS19560.1	1	295	10	5.85	0.5	86.8	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000025534	Gusb	ENSMUST00000201801	ENSMUSP00000144478	TRANSLATION	nonsense_mediated_decay	-	-	1	144	0	2.4	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000025534	Gusb	ENSMUST00000126676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025534	Gusb	ENSMUST00000122994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025534	Gusb	ENSMUST00000026613	ENSMUSP00000026613	TRANSLATION	protein_coding	-	CCDS19705.1	1	648	11	12.25	1.5	416.9	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000025534	Gusb	ENSMUST00000111307	ENSMUSP00000106939	TRANSLATION	protein_coding	-	-	1	144	0	2.4	0	0	0	3,-1	-	-	0	MINOR
ENSMUSG00000025534	Gusb	ENSMUST00000111308	ENSMUSP00000106940	TRANSLATION	protein_coding	-	-	1	250	4	4.566	0	0	0	3,-1	-	-	1.332	MINOR
ENSMUSG00000096846	Gm8890	ENSMUST00000164262	ENSMUSP00000127049	TRANSLATION	protein_coding	start	-	5	157	0	0	0.5	81.7	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000096846	Gm8890	ENSMUST00000177727	ENSMUSP00000136387	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	81.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000029186	Pi4k2b	ENSMUST00000145825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029186	Pi4k2b	ENSMUST00000031082	ENSMUSP00000031082	TRANSLATION	protein_coding	-	CCDS39086.1	2	446	0	7.83	0.5	233.7	0	-4,-5	-	-	9.204	MINOR
ENSMUSG00000029186	Pi4k2b	ENSMUST00000131526	ENSMUSP00000142802	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029186	Pi4k2b	ENSMUST00000031081	ENSMUSP00000031081	TRANSLATION	protein_coding	-	CCDS19287.1	1	469	0	8.83	0.5	247	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096035	Odaph	ENSMUST00000178614	ENSMUSP00000136951	TRANSLATION	protein_coding	-	CCDS57356.1	1	126	0	0	0.5	137.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000096035	Odaph	ENSMUST00000201568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029084	Cd38	ENSMUST00000030964	ENSMUSP00000030964	TRANSLATION	protein_coding	-	CCDS19265.1	1	304	7	7	1.5	337	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029084	Cd38	ENSMUST00000196600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025337	Sbds	ENSMUST00000139211	ENSMUSP00000117348	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1	0	33.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025337	Sbds	ENSMUST00000026387	ENSMUSP00000026387	TRANSLATION	protein_coding	-	CCDS19710.1	1	250	0	5	15	247.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000025337	Sbds	ENSMUST00000201598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025337	Sbds	ENSMUST00000125625	ENSMUSP00000115494	TRANSLATION	protein_coding	start	-	2	173	0	3	0	178.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025337	Sbds	ENSMUST00000200815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105340	Gm42878	ENSMUST00000125946	ENSMUSP00000142503	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	471	19	7.18	14.8	205.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000051391	Ywhag	ENSMUST00000055808	ENSMUSP00000051223	TRANSLATION	protein_coding	-	CCDS19748.1	1	247	0	1.75	19.5	354.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051391	Ywhag	ENSMUST00000198270	ENSMUSP00000143631	TRANSLATION	protein_coding	-	CCDS19748.1	5	247	0	1.75	19.5	354.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051391	Ywhag	ENSMUST00000126639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051391	Ywhag	ENSMUST00000129581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051391	Ywhag	ENSMUST00000126192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037379	Spon2	ENSMUST00000200884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037379	Spon2	ENSMUST00000201475	ENSMUSP00000144416	TRANSLATION	protein_coding	stop	-	3	179	1	3	0	169.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037379	Spon2	ENSMUST00000201199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037379	Spon2	ENSMUST00000201175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037379	Spon2	ENSMUST00000046186	ENSMUSP00000042701	TRANSLATION	protein_coding	-	CCDS19200.1	1	330	3	5	1.5	276.2	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000031558	Slit2	ENSMUST00000172561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000173671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000196024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000174313	ENSMUSP00000133912	TRANSLATION	protein_coding	-	CCDS71588.1	1	1525	18	27.21	5.1	744.5	0	1,-3	-	-	19.233	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000197400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031558	Slit2	ENSMUST00000172824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031558	Slit2	ENSMUST00000172484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000173646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000170109	ENSMUSP00000127615	TRANSLATION	protein_coding	-	-	5	1533	18	27.474	7.5	744.5	0	1,-3	-	-	20.868	ALTERNATIVE:1
ENSMUSG00000031558	Slit2	ENSMUST00000173303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000174421	ENSMUSP00000134263	TRANSLATION	protein_coding	-	CCDS71586.1	1	1542	18	27.54	2.8	740	0	1,-3	-	-	18.561	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000173926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031558	Slit2	ENSMUST00000033967	ENSMUSP00000033967	TRANSLATION	nonsense_mediated_decay	-	-	1	851	0	19.87	0	456.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000174658	ENSMUSP00000134359	TRANSLATION	nonsense_mediated_decay	start	-	5	118	0	3.63	0	51	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000172493	ENSMUSP00000134655	TRANSLATION	protein_coding	start/stop	-	5	255	10	6.822	0	125.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000199024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000197737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000174487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031558	Slit2	ENSMUST00000174061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000172998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031558	Slit2	ENSMUST00000173107	ENSMUSP00000133840	TRANSLATION	protein_coding	-	CCDS19280.1	1	1521	18	27.21	6.3	744.5	0	1,-3	-	-	19.785	PRINCIPAL:2
ENSMUSG00000031558	Slit2	ENSMUST00000173686	ENSMUSP00000133382	TRANSLATION	nonsense_mediated_decay	start	-	3	150	8	1.77	0	88	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031558	Slit2	ENSMUST00000173774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105096	Gbp10	ENSMUST00000065588	ENSMUSP00000069042	TRANSLATION	protein_coding	-	CCDS51581.1	1	611	11	8.6	0.5	758.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000105096	Gbp10	ENSMUST00000196634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091375	Vmn2r15	ENSMUST00000233813	ENSMUSP00000156417	TRANSLATION	protein_coding	-	-	-	577	2	2.16	0	164.3	0	1,-3	-	-	6.788	MINOR
ENSMUSG00000091375	Vmn2r15	ENSMUST00000167133	ENSMUSP00000128333	TRANSLATION	protein_coding	-	CCDS51601.1	5	855	4	2.706	0.5	372.5	7	1,-3	-	-	15.628	PRINCIPAL:2
ENSMUSG00000091375	Vmn2r15	ENSMUST00000233282	ENSMUSP00000156797	TRANSLATION	protein_coding	-	-	-	846	4	2.64	0.5	378.7	7	1,-3	-	-	15.856	ALTERNATIVE:2
ENSMUSG00000091375	Vmn2r15	ENSMUST00000232771	ENSMUSP00000156715	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000091375	Vmn2r15	ENSMUST00000233141	ENSMUSP00000156713	TRANSLATION	protein_coding	-	-	-	847	4	2.64	0.5	378.2	7	1,-3	-	-	15.826	ALTERNATIVE:2
ENSMUSG00000091375	Vmn2r15	ENSMUST00000232780	ENSMUSP00000156445	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000079423	Gm3286	ENSMUST00000171752	ENSMUSP00000132710	TRANSLATION	protein_coding	-	CCDS51562.1	5	284	2	0	1.5	0	0	-4,-6	-	-	2	PRINCIPAL:3
ENSMUSG00000079423	Gm3286	ENSMUST00000200932	ENSMUSP00000144419	TRANSLATION	protein_coding	-	CCDS80342.1	5	481	2	0	1.5	0	0	-4,-6	-	-	2	ALTERNATIVE:2
ENSMUSG00000079423	Gm3286	ENSMUST00000201629	ENSMUSP00000144438	TRANSLATION	protein_coding	-	CCDS51562.1	3	284	2	0	1.5	0	0	-4,-6	-	-	2	PRINCIPAL:3
ENSMUSG00000029712	Actl6b	ENSMUST00000031725	ENSMUSP00000031725	TRANSLATION	nonsense_mediated_decay	-	-	5	381	23	7.896	0	393	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000139395	ENSMUSP00000119356	TRANSLATION	protein_coding	-	CCDS19770.1	1	426	24	9.096	12.8	486.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029712	Actl6b	ENSMUST00000136565	ENSMUSP00000117425	TRANSLATION	protein_coding	stop	-	3	116	8	2.424	0	124.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000145500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029712	Actl6b	ENSMUST00000149292	ENSMUSP00000123004	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000198601	ENSMUSP00000143702	TRANSLATION	nonsense_mediated_decay	-	-	2	65	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000125489	ENSMUSP00000121672	TRANSLATION	protein_coding	stop	-	3	20	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000136088	ENSMUSP00000117138	TRANSLATION	protein_coding	stop	-	3	74	0	2.314	0	84.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029712	Actl6b	ENSMUST00000196154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029408	Abcb9	ENSMUST00000031354	ENSMUSP00000031354	TRANSLATION	protein_coding	-	CCDS19671.1	1	762	11	9.87	1.5	313.3	9	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029408	Abcb9	ENSMUST00000153433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029408	Abcb9	ENSMUST00000126970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029408	Abcb9	ENSMUST00000126856	ENSMUSP00000118908	TRANSLATION	nonsense_mediated_decay	-	-	5	268	0	0.94	0	0	7	1,-2	-	-	-1	MINOR
ENSMUSG00000029408	Abcb9	ENSMUST00000141510	ENSMUSP00000122969	TRANSLATION	nonsense_mediated_decay	-	-	5	268	0	0.94	0	0	7	1,-2	-	-	-1	MINOR
ENSMUSG00000029408	Abcb9	ENSMUST00000148392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029576	Radil	ENSMUST00000085758	ENSMUSP00000082910	TRANSLATION	protein_coding	-	CCDS80453.1	2	1099	0	7.88	1.5	199	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000029576	Radil	ENSMUST00000063635	ENSMUSP00000064539	TRANSLATION	protein_coding	-	CCDS19827.1	1	1070	0	7.88	1.5	199	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000029576	Radil	ENSMUST00000110784	ENSMUSP00000106411	TRANSLATION	protein_coding	-	-	1	830	0	5.28	0.5	125.4	0	-4,-7	-	-	2.382	MINOR
ENSMUSG00000029576	Radil	ENSMUST00000139824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029576	Radil	ENSMUST00000110785	ENSMUSP00000106412	TRANSLATION	protein_coding	-	CCDS71698.1	1	1093	0	7.88	0.5	199	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000029576	Radil	ENSMUST00000129212	ENSMUSP00000115800	TRANSLATION	protein_coding	stop	-	3	107	0	1	0	37.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029576	Radil	ENSMUST00000150380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029576	Radil	ENSMUST00000139278	ENSMUSP00000118477	TRANSLATION	protein_coding	stop	-	3	80	0	0.6	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000044968	Napepld	ENSMUST00000115217	ENSMUSP00000110872	TRANSLATION	protein_coding	-	CCDS19105.1	1	396	5	4	6.3	0	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000044968	Napepld	ENSMUST00000060899	ENSMUSP00000054458	TRANSLATION	protein_coding	-	CCDS19105.1	1	396	5	4	6.3	0	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000035811	Ugt2b35	ENSMUST00000031186	ENSMUSP00000031186	TRANSLATION	protein_coding	-	CCDS39128.1	5	529	15	3.8	0.5	835	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000045790	Ccdc149	ENSMUST00000213027	ENSMUSP00000148688	TRANSLATION	protein_coding	start	-	5	349	0	0	0	196.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045790	Ccdc149	ENSMUST00000059428	ENSMUSP00000062411	TRANSLATION	protein_coding	-	CCDS57343.1	5	524	0	0	1.5	377.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045790	Ccdc149	ENSMUST00000198008	ENSMUSP00000143041	TRANSLATION	protein_coding	-	-	5	152	0	0	0	104.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029309	Sparcl1	ENSMUST00000199947	ENSMUSP00000143177	TRANSLATION	protein_coding	stop	-	3	239	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000029309	Sparcl1	ENSMUST00000031249	ENSMUSP00000031249	TRANSLATION	protein_coding	-	CCDS19483.1	1	650	9	5.48	0.5	233.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000001687	Ubl3	ENSMUST00000202938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001687	Ubl3	ENSMUST00000201597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001687	Ubl3	ENSMUST00000201139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001687	Ubl3	ENSMUST00000164904	ENSMUSP00000131049	TRANSLATION	protein_coding	-	CCDS39403.1	1	117	0	3.33	19.5	110.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001687	Ubl3	ENSMUST00000079324	ENSMUSP00000078303	TRANSLATION	protein_coding	-	CCDS39403.1	1	117	0	3.33	19.5	110.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001687	Ubl3	ENSMUST00000201595	ENSMUSP00000144073	TRANSLATION	protein_coding	-	CCDS39403.1	2	117	0	3.33	19.5	110.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001687	Ubl3	ENSMUST00000201688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050017	Pitpnb	ENSMUST00000198137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050017	Pitpnb	ENSMUST00000196192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050017	Pitpnb	ENSMUST00000086635	ENSMUSP00000083835	TRANSLATION	protein_coding	-	CCDS39213.1	1	271	0	7.41	19.5	394.2	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000050017	Pitpnb	ENSMUST00000200298	ENSMUSP00000142732	TRANSLATION	protein_coding	-	CCDS80368.1	1	272	0	7.41	19.5	394.2	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000064280	Ccdc146	ENSMUST00000132473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064280	Ccdc146	ENSMUST00000129172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064280	Ccdc146	ENSMUST00000030552	ENSMUSP00000030552	TRANSLATION	protein_coding	-	-	1	363	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000064280	Ccdc146	ENSMUST00000115245	ENSMUSP00000110900	TRANSLATION	protein_coding	-	CCDS51427.1	5	977	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000064280	Ccdc146	ENSMUST00000123796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046798	Cldn12	ENSMUST00000134157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046798	Cldn12	ENSMUST00000125110	ENSMUSP00000122400	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046798	Cldn12	ENSMUST00000115446	ENSMUSP00000111106	TRANSLATION	protein_coding	-	CCDS19074.1	1	244	0	0.42	15	0	4	-2,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000046798	Cldn12	ENSMUST00000060947	ENSMUSP00000061928	TRANSLATION	protein_coding	-	CCDS19074.1	1	244	0	0.42	15	0	4	-2,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000046798	Cldn12	ENSMUST00000179804	ENSMUSP00000136988	TRANSLATION	protein_coding	-	CCDS19074.1	3	244	0	0.42	15	0	4	-2,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000046798	Cldn12	ENSMUST00000198303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046798	Cldn12	ENSMUST00000134931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046798	Cldn12	ENSMUST00000115445	ENSMUSP00000111105	TRANSLATION	protein_coding	-	CCDS19074.1	1	244	0	0.42	15	0	4	-2,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000099762	Gm21149	ENSMUST00000197995	ENSMUSP00000143356	TRANSLATION	protein_coding	-	-	5	255	0	0	0.5	99.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029299	Abcg3	ENSMUST00000130644	ENSMUSP00000120179	TRANSLATION	protein_coding	-	-	5	580	0	6.69	0	94.2	5	-4,-5	-	-	8.022	MINOR
ENSMUSG00000029299	Abcg3	ENSMUST00000031239	ENSMUSP00000031239	TRANSLATION	protein_coding	-	CCDS19488.1	1	650	0	7.65	1.5	128.5	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029102	Hgfac	ENSMUST00000202168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029102	Hgfac	ENSMUST00000201038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029102	Hgfac	ENSMUST00000202126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029102	Hgfac	ENSMUST00000202921	ENSMUSP00000144402	TRANSLATION	protein_coding	start/stop	-	3	249	8	4.5	0	177.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029102	Hgfac	ENSMUST00000201994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029102	Hgfac	ENSMUST00000030985	ENSMUSP00000030985	TRANSLATION	protein_coding	-	CCDS19223.1	1	653	12	7.25	0.5	430.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029102	Hgfac	ENSMUST00000202573	ENSMUSP00000144344	TRANSLATION	protein_coding	-	-	5	89	0	0	0	0	0	1,-2	-	-	0	MINOR
ENSMUSG00000064247	Plcxd1	ENSMUST00000141066	ENSMUSP00000119248	TRANSLATION	protein_coding	stop	-	2	98	4	0.9	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064247	Plcxd1	ENSMUST00000112534	ENSMUSP00000108153	TRANSLATION	nonsense_mediated_decay	-	-	1	121	4	0.9	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064247	Plcxd1	ENSMUST00000086687	ENSMUSP00000083892	TRANSLATION	protein_coding	-	CCDS39208.2	1	357	5	1.804	0.5	0	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000064247	Plcxd1	ENSMUST00000125748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037235	Mxd4	ENSMUST00000042701	ENSMUSP00000039071	TRANSLATION	protein_coding	-	CCDS19212.1	1	209	0	2.13	5.3	39.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000037235	Mxd4	ENSMUST00000201763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037235	Mxd4	ENSMUST00000201189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037235	Mxd4	ENSMUST00000119171	ENSMUSP00000113300	TRANSLATION	protein_coding	-	-	1	199	0	1.8	1.2	24.2	0	-4,-7	-	-	8.878	MINOR
ENSMUSG00000008307	1700109H08Rik	ENSMUST00000198134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008307	1700109H08Rik	ENSMUST00000147801	ENSMUSP00000118797	TRANSLATION	nonsense_mediated_decay	-	-	1	106	6	2.395	0	28.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008307	1700109H08Rik	ENSMUST00000156973	ENSMUSP00000121586	TRANSLATION	nonsense_mediated_decay	start	-	3	25	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008307	1700109H08Rik	ENSMUST00000008451	ENSMUSP00000008451	TRANSLATION	protein_coding	-	CCDS39001.1	1	210	16	4.095	0.5	61	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000008307	1700109H08Rik	ENSMUST00000125740	ENSMUSP00000117825	TRANSLATION	protein_coding	start	-	5	70	6	1.48	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035861	Tmprss11b	ENSMUST00000038448	ENSMUSP00000042406	TRANSLATION	protein_coding	-	CCDS39126.1	1	416	6	4.04	2.7	309	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040584	Abcb1a	ENSMUST00000145232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040584	Abcb1a	ENSMUST00000126846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040584	Abcb1a	ENSMUST00000047753	ENSMUSP00000041204	TRANSLATION	protein_coding	-	CCDS19084.1	1	1276	11	25.25	0.5	824.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040584	Abcb1a	ENSMUST00000138138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034528	Hsd17b13	ENSMUST00000120320	ENSMUSP00000113599	TRANSLATION	protein_coding	-	-	5	264	23	5.36	0	99.3	1	-2,-5	-	-	9.81	MINOR
ENSMUSG00000034528	Hsd17b13	ENSMUST00000112803	ENSMUSP00000108422	TRANSLATION	protein_coding	-	CCDS51576.1	1	300	27	6.36	0.5	158.1	1	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034528	Hsd17b13	ENSMUST00000048118	ENSMUSP00000046772	TRANSLATION	protein_coding	-	CCDS19480.1	1	304	27	6	0.5	158.1	1	-2,-5	-	-	17.28	PRINCIPAL:3
ENSMUSG00000029413	Naaa	ENSMUST00000113102	ENSMUSP00000108726	TRANSLATION	protein_coding	-	CCDS19428.1	1	362	0	0	1.5	85.9	0	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000029413	Naaa	ENSMUST00000161212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029413	Naaa	ENSMUST00000159345	ENSMUSP00000124582	TRANSLATION	protein_coding	-	CCDS51545.1	1	360	0	0	1.5	80.6	0	3,-2	-	-	5.628	ALTERNATIVE:2
ENSMUSG00000029413	Naaa	ENSMUST00000159732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029413	Naaa	ENSMUST00000175656	ENSMUSP00000135610	TRANSLATION	protein_coding	start/stop	-	3	217	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039765	Cc2d2a	ENSMUST00000127355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039765	Cc2d2a	ENSMUST00000048150	ENSMUSP00000048320	TRANSLATION	protein_coding	-	CCDS39080.1	1	1633	0	0	1.5	224.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039765	Cc2d2a	ENSMUST00000142303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039765	Cc2d2a	ENSMUST00000125866	ENSMUSP00000114349	TRANSLATION	protein_coding	stop	-	5	1457	0	0	0	224.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064267	Hvcn1	ENSMUST00000143560	ENSMUSP00000118013	TRANSLATION	protein_coding	stop	-	3	168	0	3	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000064267	Hvcn1	ENSMUST00000072602	ENSMUSP00000072401	TRANSLATION	protein_coding	-	CCDS19644.1	1	269	0	5.75	0.5	125.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000064267	Hvcn1	ENSMUST00000145854	ENSMUSP00000118151	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064267	Hvcn1	ENSMUST00000196187	ENSMUSP00000143483	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000064267	Hvcn1	ENSMUST00000100747	ENSMUSP00000098312	TRANSLATION	protein_coding	-	CCDS19644.1	1	269	0	5.75	0.5	125.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053194	Cib4	ENSMUST00000065486	ENSMUSP00000066222	TRANSLATION	protein_coding	-	CCDS51453.1	1	185	13	4.084	6.3	39.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000072693	Gm10401	ENSMUST00000100848	ENSMUSP00000098409	TRANSLATION	protein_coding	-	-	-	71	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000034118	Tpst1	ENSMUST00000040721	ENSMUSP00000035614	TRANSLATION	protein_coding	-	CCDS39293.1	1	370	10	3.3	13	193.9	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034118	Tpst1	ENSMUST00000142838	ENSMUSP00000119880	TRANSLATION	protein_coding	stop	-	2	120	6	0.8	0	60.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000034118	Tpst1	ENSMUST00000118993	ENSMUSP00000112571	TRANSLATION	protein_coding	-	CCDS39293.1	1	370	10	3.3	13	193.9	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034118	Tpst1	ENSMUST00000128335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182584	ENSMUSP00000138260	TRANSLATION	nonsense_mediated_decay	start	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029422	Rsrc2	ENSMUST00000182948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029422	Rsrc2	ENSMUST00000183147	ENSMUSP00000138301	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182861	ENSMUSP00000138725	TRANSLATION	nonsense_mediated_decay	start	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000111515	ENSMUSP00000107140	TRANSLATION	protein_coding	-	-	5	189	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182093	ENSMUSP00000138242	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182015	ENSMUSP00000138210	TRANSLATION	nonsense_mediated_decay	-	-	1	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182309	ENSMUSP00000138691	TRANSLATION	protein_coding	-	CCDS39271.1	5	434	0	0	0.5	64.6	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000029422	Rsrc2	ENSMUST00000182968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182955	ENSMUSP00000138280	TRANSLATION	protein_coding	-	-	5	203	0	0	1.2	64.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029422	Rsrc2	ENSMUST00000183253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000182241	ENSMUSP00000138162	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182411	ENSMUSP00000138439	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000050827	ENSMUSP00000050563	TRANSLATION	protein_coding	-	CCDS39272.1	5	376	0	0	2.7	64.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000029422	Rsrc2	ENSMUST00000181980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029422	Rsrc2	ENSMUST00000182985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029422	Rsrc2	ENSMUST00000057795	ENSMUSP00000049942	TRANSLATION	protein_coding	-	CCDS39272.1	5	376	0	0	2.7	64.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000029422	Rsrc2	ENSMUST00000182556	ENSMUSP00000138631	TRANSLATION	nonsense_mediated_decay	-	-	1	197	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029422	Rsrc2	ENSMUST00000182489	ENSMUSP00000138518	TRANSLATION	protein_coding	-	-	5	387	0	0	2.9	64.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029304	Spp1	ENSMUST00000112748	ENSMUSP00000108368	TRANSLATION	protein_coding	-	CCDS19486.1	1	294	0	0	0.5	394.5	0	3,-2	-	-	5.526	PRINCIPAL:3
ENSMUSG00000029304	Spp1	ENSMUST00000112747	ENSMUSP00000108367	TRANSLATION	protein_coding	-	CCDS19486.1	1	294	0	0	0.5	394.5	0	3,-2	-	-	5.526	PRINCIPAL:3
ENSMUSG00000029304	Spp1	ENSMUST00000112746	ENSMUSP00000108366	TRANSLATION	protein_coding	stop	-	5	164	0	0	0	226.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029304	Spp1	ENSMUST00000031243	ENSMUSP00000031243	TRANSLATION	protein_coding	-	CCDS19486.1	1	294	0	0	0.5	394.5	0	3,-2	-	-	5.526	PRINCIPAL:3
ENSMUSG00000029304	Spp1	ENSMUST00000145084	ENSMUSP00000117338	TRANSLATION	protein_coding	stop	-	5	152	0	0	0	208.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029304	Spp1	ENSMUST00000086833	ENSMUSP00000084043	TRANSLATION	protein_coding	-	CCDS57367.1	5	295	0	0	0.5	402.4	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000029304	Spp1	ENSMUST00000132457	ENSMUSP00000123163	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	34	0	3,-2	-	-	-1	MINOR
ENSMUSG00000044576	Garem2	ENSMUST00000058045	ENSMUSP00000054208	TRANSLATION	protein_coding	-	CCDS51449.1	5	880	0	0.4	1.5	263.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036087	Slain2	ENSMUST00000145939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036087	Slain2	ENSMUST00000200785	ENSMUSP00000144204	TRANSLATION	protein_coding	stop	-	5	188	0	0	0	261.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036087	Slain2	ENSMUST00000183284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036087	Slain2	ENSMUST00000144843	ENSMUSP00000116528	TRANSLATION	protein_coding	-	CCDS51517.1	1	581	0	0	7.5	559.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036087	Slain2	ENSMUST00000143829	ENSMUSP00000115871	TRANSLATION	protein_coding	-	CCDS19335.2	5	607	0	0	7.5	544.8	0	-4,-5	-	-	8.106	MINOR
ENSMUSG00000035528	Npffr2	ENSMUST00000048557	ENSMUSP00000040033	TRANSLATION	protein_coding	-	CCDS19408.1	1	417	0	2.22	1.5	189.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054814	Usp46	ENSMUST00000150009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054814	Usp46	ENSMUST00000119154	ENSMUSP00000114060	TRANSLATION	protein_coding	-	-	5	339	7	7.25	0	193.2	0	-4,-7	-	-	15.168	MINOR
ENSMUSG00000054814	Usp46	ENSMUST00000128750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054814	Usp46	ENSMUST00000152408	ENSMUSP00000144284	TRANSLATION	protein_coding	start	-	3	145	2	1.5	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054814	Usp46	ENSMUST00000068058	ENSMUSP00000070554	TRANSLATION	protein_coding	-	CCDS39112.1	1	366	8	8	13.6	202.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000054814	Usp46	ENSMUST00000145016	ENSMUSP00000114395	TRANSLATION	protein_coding	stop	-	3	121	2	2.25	0	91.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073208	Speer4c	ENSMUST00000095005	ENSMUSP00000133641	TRANSLATION	protein_coding	-	CCDS59669.1	1	256	0	0	0.5	101.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000073208	Speer4c	ENSMUST00000179506	ENSMUSP00000136269	TRANSLATION	protein_coding	stop	-	1	137	0	0	0	101.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063430	Wscd2	ENSMUST00000180565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063430	Wscd2	ENSMUST00000094452	ENSMUSP00000092021	TRANSLATION	protein_coding	-	CCDS19550.2	1	571	16	1.72	1.5	115.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000063430	Wscd2	ENSMUST00000198673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063430	Wscd2	ENSMUST00000138757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063430	Wscd2	ENSMUST00000181650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063430	Wscd2	ENSMUST00000181294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039706	Ldb2	ENSMUST00000199261	ENSMUSP00000143289	TRANSLATION	protein_coding	-	CCDS84878.1	5	371	0	1	15	193.1	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000039706	Ldb2	ENSMUST00000199534	ENSMUSP00000142442	TRANSLATION	protein_coding	-	CCDS80276.1	1	331	0	0	12.8	193.1	0	-4,-7	-	-	9.372	MINOR
ENSMUSG00000039706	Ldb2	ENSMUST00000198894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039706	Ldb2	ENSMUST00000070748	ENSMUSP00000067737	TRANSLATION	protein_coding	-	CCDS19271.1	1	373	0	1	15	193.1	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000039706	Ldb2	ENSMUST00000199471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039706	Ldb2	ENSMUST00000199256	ENSMUSP00000143775	TRANSLATION	protein_coding	-	CCDS80278.1	1	329	0	0	12.8	193.1	0	-4,-7	-	-	9.372	MINOR
ENSMUSG00000039706	Ldb2	ENSMUST00000198356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029146	Snx17	ENSMUST00000202124	ENSMUSP00000144168	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029146	Snx17	ENSMUST00000202318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029146	Snx17	ENSMUST00000200730	ENSMUSP00000144504	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	2.5	0	53.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029146	Snx17	ENSMUST00000202032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029146	Snx17	ENSMUST00000202323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029146	Snx17	ENSMUST00000202743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029146	Snx17	ENSMUST00000201835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029146	Snx17	ENSMUST00000031029	ENSMUSP00000031029	TRANSLATION	protein_coding	-	CCDS19177.1	1	470	0	10.91	10.8	62.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029146	Snx17	ENSMUST00000201343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029146	Snx17	ENSMUST00000201679	ENSMUSP00000144688	TRANSLATION	protein_coding	stop	-	5	67	0	2.08	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029146	Snx17	ENSMUST00000201535	ENSMUSP00000144643	TRANSLATION	protein_coding	stop	-	3	169	0	5.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036898	Zfp157	ENSMUST00000100524	ENSMUSP00000098093	TRANSLATION	protein_coding	-	-	3	112	0	1	0	86.2	0	-4,-6	-	-	3.75	MINOR
ENSMUSG00000036898	Zfp157	ENSMUST00000085856	ENSMUSP00000083018	TRANSLATION	protein_coding	-	CCDS39345.1	1	567	44	1.6	1.5	319.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036898	Zfp157	ENSMUST00000137711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036898	Zfp157	ENSMUST00000134706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036898	Zfp157	ENSMUST00000110912	ENSMUSP00000106537	TRANSLATION	protein_coding	-	-	3	128	0	1	0	86.2	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000036898	Zfp157	ENSMUST00000151095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029623	Pdap1	ENSMUST00000199218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029623	Pdap1	ENSMUST00000123111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029623	Pdap1	ENSMUST00000148781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029623	Pdap1	ENSMUST00000031627	ENSMUSP00000031627	TRANSLATION	protein_coding	-	CCDS39384.1	1	181	0	0	14.8	104.7	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000029623	Pdap1	ENSMUST00000143439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040013	Fkbp6	ENSMUST00000044972	ENSMUSP00000043193	TRANSLATION	protein_coding	-	CCDS19738.1	1	327	0	5.5	2.7	64.8	0	-4,-7	-	-	11.986	PRINCIPAL:3
ENSMUSG00000040013	Fkbp6	ENSMUST00000201791	ENSMUSP00000144460	TRANSLATION	protein_coding	-	CCDS80426.1	1	287	0	4.9	0.5	64.8	0	-4,-7	-	-	10.2	MINOR
ENSMUSG00000040013	Fkbp6	ENSMUST00000201784	ENSMUSP00000144381	TRANSLATION	protein_coding	-	CCDS80425.1	1	327	0	5.8	3.9	64.8	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000040013	Fkbp6	ENSMUST00000201534	ENSMUSP00000144471	TRANSLATION	protein_coding	-	CCDS19738.1	1	327	0	5.5	2.7	64.8	0	-4,-7	-	-	11.986	PRINCIPAL:3
ENSMUSG00000038722	Bud31	ENSMUST00000159018	ENSMUSP00000124999	TRANSLATION	protein_coding	-	CCDS80463.1	5	144	2	3.5	18.2	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038722	Bud31	ENSMUST00000160075	ENSMUSP00000125564	TRANSLATION	protein_coding	-	CCDS80463.1	2	144	2	3.5	18.2	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038722	Bud31	ENSMUST00000161974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038722	Bud31	ENSMUST00000160840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038722	Bud31	ENSMUST00000162308	ENSMUSP00000125590	TRANSLATION	protein_coding	-	CCDS19857.1	1	103	2	2.5	0.5	0	0	-4,-5	-	-	6.002	MINOR
ENSMUSG00000038722	Bud31	ENSMUST00000160004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038722	Bud31	ENSMUST00000162594	ENSMUSP00000125738	TRANSLATION	protein_coding	-	CCDS80463.1	2	144	2	3.5	18.2	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045482	Trrap	ENSMUST00000197741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045482	Trrap	ENSMUST00000136379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000100467	ENSMUSP00000098035	TRANSLATION	protein_coding	-	CCDS39379.1	1	3847	0	4.1	1.5	293.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000045482	Trrap	ENSMUST00000198524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000132925	ENSMUSP00000122021	TRANSLATION	protein_coding	start	-	5	3587	0	4.1	0	293.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045482	Trrap	ENSMUST00000138589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045482	Trrap	ENSMUST00000132347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000124909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000213013	ENSMUSP00000148419	TRANSLATION	protein_coding	-	-	5	3859	0	4.1	0	291	0	-4,-5	-	-	11.826	ALTERNATIVE:2
ENSMUSG00000045482	Trrap	ENSMUST00000197834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000038980	ENSMUSP00000042544	TRANSLATION	protein_coding	-	-	5	3829	0	4.1	1.7	293.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045482	Trrap	ENSMUST00000128550	ENSMUSP00000115917	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045482	Trrap	ENSMUST00000094120	ENSMUSP00000091668	TRANSLATION	protein_coding	-	-	5	3858	0	4.1	0	291	0	-4,-5	-	-	11.826	ALTERNATIVE:2
ENSMUSG00000045482	Trrap	ENSMUST00000143357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045482	Trrap	ENSMUST00000196258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039315	Clnk	ENSMUST00000171633	ENSMUSP00000132779	TRANSLATION	protein_coding	-	-	5	435	0	1.96	1.5	54.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039315	Clnk	ENSMUST00000169819	ENSMUSP00000128473	TRANSLATION	protein_coding	-	CCDS51486.1	1	435	0	1.96	1.5	54.6	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000061707	Gm4871	ENSMUST00000071421	ENSMUSP00000071368	TRANSLATION	protein_coding	-	CCDS51695.1	1	314	0	0	0.5	32.7	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000001622	Csn3	ENSMUST00000113271	ENSMUSP00000108896	TRANSLATION	protein_coding	-	CCDS19396.1	1	181	0	0	1.5	207.5	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000001622	Csn3	ENSMUST00000144929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001622	Csn3	ENSMUST00000148793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001622	Csn3	ENSMUST00000140690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001622	Csn3	ENSMUST00000001667	ENSMUSP00000001667	TRANSLATION	protein_coding	-	CCDS19396.1	1	181	0	0	1.5	207.5	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000001622	Csn3	ENSMUST00000113267	ENSMUSP00000108892	TRANSLATION	protein_coding	-	CCDS19396.1	1	181	0	0	1.5	207.5	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000029236	Nmu	ENSMUST00000031146	ENSMUSP00000031146	TRANSLATION	protein_coding	-	CCDS19362.1	1	174	0	0	3.9	46.7	0	0,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000029179	Zcchc4	ENSMUST00000113904	ENSMUSP00000109537	TRANSLATION	protein_coding	-	CCDS80282.1	1	489	20	0	1.5	135	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029179	Zcchc4	ENSMUST00000031077	ENSMUSP00000031077	TRANSLATION	protein_coding	-	CCDS39087.1	1	512	20	0	0.5	135	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029179	Zcchc4	ENSMUST00000149612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029179	Zcchc4	ENSMUST00000113901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029179	Zcchc4	ENSMUST00000157074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029179	Zcchc4	ENSMUST00000198465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029179	Zcchc4	ENSMUST00000199840	ENSMUSP00000142838	TRANSLATION	protein_coding	start/stop	-	3	143	3	0	0	60.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029179	Zcchc4	ENSMUST00000143745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029366	Dck	ENSMUST00000196967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029366	Dck	ENSMUST00000031311	ENSMUSP00000031311	TRANSLATION	protein_coding	-	CCDS19405.1	1	260	16	6.33	7.5	258	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000029499	Pxmp2	ENSMUST00000126882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029499	Pxmp2	ENSMUST00000031472	ENSMUSP00000031472	TRANSLATION	protein_coding	-	CCDS19524.1	1	193	0	0	5.1	74.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000029499	Pxmp2	ENSMUST00000141550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029499	Pxmp2	ENSMUST00000155266	ENSMUSP00000117729	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029108	Pcdh7	ENSMUST00000094783	ENSMUSP00000092376	TRANSLATION	protein_coding	-	CCDS80286.1	1	1247	64	1.32	6.3	666.7	1	3,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000029108	Pcdh7	ENSMUST00000068110	ENSMUSP00000066306	TRANSLATION	protein_coding	-	CCDS19296.1	1	1069	64	1.32	5.1	666.7	1	3,-2	-	-	19.548	PRINCIPAL:3
ENSMUSG00000029108	Pcdh7	ENSMUST00000195156	ENSMUSP00000141378	TRANSLATION	nonsense_mediated_decay	start	-	5	379	12	0.42	0	391.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029108	Pcdh7	ENSMUST00000199310	ENSMUSP00000143387	TRANSLATION	protein_coding	-	-	2	171	0	0	0	135.2	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029108	Pcdh7	ENSMUST00000192287	ENSMUSP00000142276	TRANSLATION	protein_coding	start	-	1	802	45	1.02	0	578.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000029108	Pcdh7	ENSMUST00000192048	ENSMUSP00000141505	TRANSLATION	protein_coding	start	-	3	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029108	Pcdh7	ENSMUST00000191837	ENSMUSP00000142319	TRANSLATION	protein_coding	-	CCDS51505.1	1	1255	64	1.32	5.1	666.7	1	3,-2	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000001566	Mnx1	ENSMUST00000001608	ENSMUSP00000001608	TRANSLATION	protein_coding	-	-	5	404	0	1.2	0.5	75.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000001566	Mnx1	ENSMUST00000165512	ENSMUSP00000129503	TRANSLATION	protein_coding	-	CCDS19150.1	1	404	0	1.2	0.5	75.6	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000029726	Mepce	ENSMUST00000132726	ENSMUSP00000118688	TRANSLATION	protein_coding	start	-	3	173	13	3.5	0	147.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029726	Mepce	ENSMUST00000031740	ENSMUSP00000031740	TRANSLATION	protein_coding	-	CCDS39337.1	1	666	17	4.1	0.5	179.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029726	Mepce	ENSMUST00000140336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029726	Mepce	ENSMUST00000196936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029726	Mepce	ENSMUST00000196022	ENSMUSP00000143201	TRANSLATION	protein_coding	stop	-	5	32	0	1	0	40.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029547	Ints1	ENSMUST00000196379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029547	Ints1	ENSMUST00000197156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029547	Ints1	ENSMUST00000197187	ENSMUSP00000143274	TRANSLATION	protein_coding	start	-	5	137	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029547	Ints1	ENSMUST00000196864	ENSMUSP00000142362	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029547	Ints1	ENSMUST00000200393	ENSMUSP00000143789	TRANSLATION	protein_coding	-	CCDS57399.1	1	2222	0	0	1.5	114.4	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000029547	Ints1	ENSMUST00000072607	ENSMUSP00000072406	TRANSLATION	protein_coding	-	-	5	2220	0	0	1.5	114.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000029547	Ints1	ENSMUST00000198615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029547	Ints1	ENSMUST00000200339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029547	Ints1	ENSMUST00000197727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029547	Ints1	ENSMUST00000196319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029319	Coq2	ENSMUST00000126981	ENSMUSP00000122296	TRANSLATION	nonsense_mediated_decay	-	-	2	157	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000029319	Coq2	ENSMUST00000031262	ENSMUSP00000031262	TRANSLATION	protein_coding	-	CCDS19465.1	1	374	0	2.1	1.5	172.6	5	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000029319	Coq2	ENSMUST00000135146	ENSMUSP00000122631	TRANSLATION	nonsense_mediated_decay	start	-	5	125	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000029319	Coq2	ENSMUST00000127811	ENSMUSP00000115605	TRANSLATION	protein_coding	stop	-	3	16	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000029319	Coq2	ENSMUST00000135801	ENSMUSP00000119410	TRANSLATION	protein_coding	stop	-	2	71	0	1.05	0	41.9	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000029162	Khk	ENSMUST00000201621	ENSMUSP00000144050	TRANSLATION	protein_coding	-	CCDS39050.1	1	298	25	8	10.8	118.7	0	-4,-5	-	-	18.534	MINOR
ENSMUSG00000029162	Khk	ENSMUST00000031053	ENSMUSP00000031053	TRANSLATION	protein_coding	-	CCDS80243.1	5	343	25	9	7.6	126.5	0	-4,-5	-	-	20.019	PRINCIPAL:1
ENSMUSG00000029162	Khk	ENSMUST00000200978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029162	Khk	ENSMUST00000202752	ENSMUSP00000143850	TRANSLATION	protein_coding	stop	-	5	243	11	6.5	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029162	Khk	ENSMUST00000201571	ENSMUSP00000144226	TRANSLATION	protein_coding	stop	-	3	253	24	7	7.6	79.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000201594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029651	Mtus2	ENSMUST00000146425	ENSMUSP00000119851	TRANSLATION	nonsense_mediated_decay	-	-	5	42	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000110515	ENSMUSP00000106144	TRANSLATION	protein_coding	-	-	1	348	2	0	9.3	0	0	-4,-5	-	-	5	PRINCIPAL:1
ENSMUSG00000029651	Mtus2	ENSMUST00000085554	ENSMUSP00000082690	TRANSLATION	protein_coding	-	-	1	152	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000128423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029651	Mtus2	ENSMUST00000149336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029651	Mtus2	ENSMUST00000071878	ENSMUSP00000071775	TRANSLATION	protein_coding	-	-	1	205	2	0	0	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000110514	ENSMUSP00000106143	TRANSLATION	protein_coding	-	-	5	315	2	0	1	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000152105	ENSMUSP00000123055	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000085558	ENSMUSP00000082694	TRANSLATION	protein_coding	-	CCDS19881.1	1	1353	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029651	Mtus2	ENSMUST00000129092	ENSMUSP00000120449	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029386	Tctn2	ENSMUST00000130912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029386	Tctn2	ENSMUST00000152822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029386	Tctn2	ENSMUST00000132090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029386	Tctn2	ENSMUST00000140953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029386	Tctn2	ENSMUST00000185820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029386	Tctn2	ENSMUST00000125191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029386	Tctn2	ENSMUST00000100706	ENSMUSP00000158959	TRANSLATION	protein_coding	-	-	5	699	0	0	0	241.2	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045302	Preb	ENSMUST00000200836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045302	Preb	ENSMUST00000202590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045302	Preb	ENSMUST00000200756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045302	Preb	ENSMUST00000202567	ENSMUSP00000144263	TRANSLATION	protein_coding	-	CCDS80244.1	1	350	0	6.83	4.1	22	0	-4,-2	-	-	11.229	MINOR
ENSMUSG00000045302	Preb	ENSMUST00000202445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045302	Preb	ENSMUST00000202930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045302	Preb	ENSMUST00000202904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045302	Preb	ENSMUST00000202472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045302	Preb	ENSMUST00000201730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045302	Preb	ENSMUST00000074840	ENSMUSP00000074387	TRANSLATION	protein_coding	-	CCDS39051.1	1	417	0	7.93	7.5	22	1	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000045302	Preb	ENSMUST00000201821	ENSMUSP00000144321	TRANSLATION	protein_coding	start	-	3	95	0	1.33	0	22	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045302	Preb	ENSMUST00000202593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045302	Preb	ENSMUST00000201002	ENSMUSP00000143990	TRANSLATION	protein_coding	start	-	3	186	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057541	Pus7	ENSMUST00000131992	ENSMUSP00000123129	TRANSLATION	protein_coding	-	CCDS51431.1	1	660	0	15.88	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000057541	Pus7	ENSMUST00000148921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057541	Pus7	ENSMUST00000119946	ENSMUSP00000113801	TRANSLATION	protein_coding	-	CCDS51431.1	1	660	0	15.88	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000057541	Pus7	ENSMUST00000147922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057541	Pus7	ENSMUST00000131404	ENSMUSP00000122033	TRANSLATION	nonsense_mediated_decay	start	-	5	185	0	4.882	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057541	Pus7	ENSMUST00000195909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057541	Pus7	ENSMUST00000129848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057541	Pus7	ENSMUST00000151449	ENSMUSP00000120575	TRANSLATION	nonsense_mediated_decay	start	-	3	176	0	1.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057541	Pus7	ENSMUST00000148618	ENSMUSP00000114588	TRANSLATION	protein_coding	-	CCDS80219.1	1	666	0	15.715	1.5	0	0	-4,-5	-	-	5.67	ALTERNATIVE:2
ENSMUSG00000029249	Rest	ENSMUST00000113449	ENSMUSP00000109076	TRANSLATION	protein_coding	-	CCDS19372.1	1	1082	31	0.75	0.5	31.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029249	Rest	ENSMUST00000080359	ENSMUSP00000079231	TRANSLATION	protein_coding	-	CCDS19372.1	1	1082	31	0.75	0.5	31.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049691	Nkx3-2	ENSMUST00000060820	ENSMUSP00000051990	TRANSLATION	protein_coding	-	CCDS19259.1	1	333	0	0.6	5.3	73	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000028780	Sema3c	ENSMUST00000030568	ENSMUSP00000030568	TRANSLATION	protein_coding	-	CCDS19099.1	1	751	2	12.828	11.5	517.8	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000028780	Sema3c	ENSMUST00000170348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028780	Sema3c	ENSMUST00000115271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028780	Sema3c	ENSMUST00000169603	ENSMUSP00000132330	TRANSLATION	protein_coding	stop	-	3	226	2	4.828	0	176.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000028780	Sema3c	ENSMUST00000170181	ENSMUSP00000126614	TRANSLATION	nonsense_mediated_decay	-	-	5	42	2	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000018974	Sart3	ENSMUST00000197041	ENSMUSP00000143778	TRANSLATION	nonsense_mediated_decay	-	-	1	401	0	5.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018974	Sart3	ENSMUST00000019118	ENSMUSP00000019118	TRANSLATION	protein_coding	-	CCDS19552.1	1	962	0	15.87	0.5	220.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018974	Sart3	ENSMUST00000196738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018974	Sart3	ENSMUST00000198097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018974	Sart3	ENSMUST00000196778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018974	Sart3	ENSMUST00000198246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018974	Sart3	ENSMUST00000198556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066621	Tecpr1	ENSMUST00000156129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000153751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000085701	ENSMUSP00000082844	TRANSLATION	protein_coding	-	CCDS39377.1	1	1166	0	2.08	1.5	268.3	0	-2,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066621	Tecpr1	ENSMUST00000147992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000153103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000196360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000125672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000130962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066621	Tecpr1	ENSMUST00000136018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000137149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000151479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066621	Tecpr1	ENSMUST00000140524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029507	Pus1	ENSMUST00000136483	ENSMUSP00000115143	TRANSLATION	protein_coding	stop	-	3	147	1	2.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029507	Pus1	ENSMUST00000086643	ENSMUSP00000083844	TRANSLATION	protein_coding	-	CCDS19530.1	1	441	1	3.82	0.5	51.7	0	-3,0	-	-	12	PRINCIPAL:4
ENSMUSG00000029507	Pus1	ENSMUST00000170468	ENSMUSP00000130814	TRANSLATION	protein_coding	-	CCDS39212.1	5	393	1	3.8	1.5	51.7	0	-4,-6	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000029507	Pus1	ENSMUST00000112426	ENSMUSP00000108045	TRANSLATION	protein_coding	-	CCDS84929.1	1	347	0	2.8	0.5	51.7	0	-4,-6	-	-	9.96	MINOR
ENSMUSG00000029507	Pus1	ENSMUST00000149208	ENSMUSP00000115468	TRANSLATION	protein_coding	stop	-	3	162	1	2.82	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029507	Pus1	ENSMUST00000031481	ENSMUSP00000031481	TRANSLATION	protein_coding	-	CCDS39212.1	1	393	1	3.8	1.5	51.7	0	-4,-6	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000029507	Pus1	ENSMUST00000031483	ENSMUSP00000031483	TRANSLATION	protein_coding	-	CCDS19531.1	1	423	1	3.8	1.5	51.7	0	-3,0	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000034462	Pkd2	ENSMUST00000130931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034462	Pkd2	ENSMUST00000086831	ENSMUSP00000084041	TRANSLATION	protein_coding	-	CCDS19487.1	1	966	5	15	0.5	562.8	0	-4,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000034462	Pkd2	ENSMUST00000133540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029564	4930519G04Rik	ENSMUST00000031547	ENSMUSP00000031547	TRANSLATION	protein_coding	-	CCDS19574.1	1	205	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000029564	4930519G04Rik	ENSMUST00000134389	ENSMUSP00000144618	TRANSLATION	protein_coding	-	-	1	194	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029564	4930519G04Rik	ENSMUST00000112153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029564	4930519G04Rik	ENSMUST00000142582	ENSMUSP00000116852	TRANSLATION	protein_coding	start	-	3	202	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055385	Rnf212	ENSMUST00000212176	ENSMUSP00000148512	TRANSLATION	nonsense_mediated_decay	-	-	5	60	8	0	0	40.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000055385	Rnf212	ENSMUST00000196652	ENSMUSP00000143556	TRANSLATION	protein_coding	-	-	2	99	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000055385	Rnf212	ENSMUST00000212212	ENSMUSP00000148758	TRANSLATION	protein_coding	-	-	5	307	8	0	1	40.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000055385	Rnf212	ENSMUST00000068946	ENSMUSP00000063525	TRANSLATION	protein_coding	-	-	5	95	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000055385	Rnf212	ENSMUST00000200159	ENSMUSP00000143229	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055385	Rnf212	ENSMUST00000197384	ENSMUSP00000142368	TRANSLATION	protein_coding	stop	-	1	179	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053863	Mepe	ENSMUST00000066207	ENSMUSP00000065200	TRANSLATION	protein_coding	-	CCDS51578.1	1	441	0	0	0.5	243.5	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000042240	Crybb2	ENSMUST00000031295	ENSMUSP00000031295	TRANSLATION	protein_coding	-	CCDS19546.1	1	205	9	4.5	13	198.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042240	Crybb2	ENSMUST00000144833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042240	Crybb2	ENSMUST00000137485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042240	Crybb2	ENSMUST00000199639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042240	Crybb2	ENSMUST00000112336	ENSMUSP00000107955	TRANSLATION	protein_coding	-	CCDS19546.1	1	205	9	4.5	13	198.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000039474	Wfs1	ENSMUST00000167937	ENSMUSP00000125779	TRANSLATION	nonsense_mediated_decay	start	-	5	157	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039474	Wfs1	ENSMUST00000166339	ENSMUSP00000132404	TRANSLATION	protein_coding	-	-	1	814	0	0	0	0	6	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000039474	Wfs1	ENSMUST00000043964	ENSMUSP00000048053	TRANSLATION	protein_coding	-	CCDS19245.1	1	890	0	0	0.5	0	7	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000029149	Krtcap3	ENSMUST00000201333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000201697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000202007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000201565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000201937	ENSMUSP00000144464	TRANSLATION	protein_coding	-	CCDS51459.1	5	240	0	0	5.1	237.7	4	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000029149	Krtcap3	ENSMUST00000054829	ENSMUSP00000060414	TRANSLATION	protein_coding	-	CCDS51459.1	1	240	0	0	5.1	237.7	4	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000029149	Krtcap3	ENSMUST00000201625	ENSMUSP00000144052	TRANSLATION	protein_coding	-	CCDS51459.1	5	240	0	0	5.1	237.7	4	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000029149	Krtcap3	ENSMUST00000202384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000201672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029149	Krtcap3	ENSMUST00000201393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037373	Ctbp1	ENSMUST00000202135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037373	Ctbp1	ENSMUST00000079746	ENSMUSP00000078682	TRANSLATION	protein_coding	-	CCDS19201.1	1	441	28	8.91	15	289.7	0	-4,-7	-	-	21.972	PRINCIPAL:3
ENSMUSG00000037373	Ctbp1	ENSMUST00000202868	ENSMUSP00000144024	TRANSLATION	protein_coding	-	CCDS80256.1	1	429	28	8.91	15.1	289.7	0	-4,-2	-	-	22	ALTERNATIVE:1
ENSMUSG00000037373	Ctbp1	ENSMUST00000201575	ENSMUSP00000144554	TRANSLATION	protein_coding	-	CCDS80255.1	1	367	27	7.08	3.7	267	0	-4,-5	-	-	13.076	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000201275	ENSMUSP00000144029	TRANSLATION	nonsense_mediated_decay	-	-	3	77	1	1.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000202190	ENSMUSP00000144596	TRANSLATION	protein_coding	stop	-	2	31	1	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000202632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037373	Ctbp1	ENSMUST00000201514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037373	Ctbp1	ENSMUST00000202820	ENSMUSP00000144303	TRANSLATION	protein_coding	stop	-	2	117	4	3.58	0	75.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000200899	ENSMUSP00000144672	TRANSLATION	protein_coding	stop	-	3	85	1	2.58	0	28.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000202962	ENSMUSP00000144251	TRANSLATION	protein_coding	-	-	2	337	27	7.51	0	258.9	0	-4,-2	-	-	12.684	MINOR
ENSMUSG00000037373	Ctbp1	ENSMUST00000201372	ENSMUSP00000143877	TRANSLATION	protein_coding	stop	-	5	180	18	4.08	0	155.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000207284	ENSMUSP00000146348	TRANSLATION	protein_coding	start/stop	-	5	238	0	2.9	0	80.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000199384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040003	Magi2	ENSMUST00000115267	ENSMUSP00000110922	TRANSLATION	protein_coding	-	CCDS39019.1	1	1112	10	12.29	0.5	398.2	0	-4,-5	-	-	10.62	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000200443	ENSMUSP00000142581	TRANSLATION	protein_coding	stop	-	5	38	5	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000199514	ENSMUSP00000143578	TRANSLATION	protein_coding	start	-	5	188	0	2.16	0	60.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000198908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040003	Magi2	ENSMUST00000200518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040003	Magi2	ENSMUST00000101558	ENSMUSP00000099094	TRANSLATION	protein_coding	-	CCDS51425.1	1	1098	10	11.99	0.5	397.5	0	-4,-5	-	-	9.978	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000208219	ENSMUSP00000146458	TRANSLATION	protein_coding	-	-	5	837	0	8.49	0	261.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000197553	ENSMUSP00000146769	TRANSLATION	protein_coding	-	-	1	853	0	8.79	0	266.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000040003	Magi2	ENSMUST00000197307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040003	Magi2	ENSMUST00000088516	ENSMUSP00000085872	TRANSLATION	protein_coding	-	CCDS51424.1	5	1275	14	13.24	1.5	438.5	0	-4,-7	-	-	17.598	PRINCIPAL:2
ENSMUSG00000040003	Magi2	ENSMUST00000197443	ENSMUSP00000142764	TRANSLATION	protein_coding	-	-	5	1400	14	13.14	0.5	437.8	0	-4,-7	-	-	17.358	ALTERNATIVE:2
ENSMUSG00000040003	Magi2	ENSMUST00000197354	ENSMUSP00000142576	TRANSLATION	protein_coding	-	-	5	1414	14	13.44	0.5	438.5	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000040003	Magi2	ENSMUST00000197822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029456	Acad10	ENSMUST00000143187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029456	Acad10	ENSMUST00000111770	ENSMUSP00000107400	TRANSLATION	protein_coding	-	CCDS51643.1	1	1069	36	15.44	0.5	431.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000029456	Acad10	ENSMUST00000133775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029456	Acad10	ENSMUST00000031412	ENSMUSP00000031412	TRANSLATION	protein_coding	-	CCDS51643.1	1	1069	36	15.44	0.5	431.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000029456	Acad10	ENSMUST00000137231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029456	Acad10	ENSMUST00000137789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040557	Mettl27	ENSMUST00000111221	ENSMUSP00000106852	TRANSLATION	protein_coding	-	CCDS84970.1	1	207	17	2.22	0.5	36.6	0	-4,-5	-	-	9.09	MINOR
ENSMUSG00000040557	Mettl27	ENSMUST00000047196	ENSMUSP00000039080	TRANSLATION	protein_coding	-	CCDS19727.1	1	238	24	3.22	0.5	58.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040557	Mettl27	ENSMUST00000148286	ENSMUSP00000119109	TRANSLATION	protein_coding	start	-	2	76	4	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040557	Mettl27	ENSMUST00000201847	ENSMUSP00000144170	TRANSLATION	protein_coding	stop	-	3	219	24	3.22	0	58.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040557	Mettl27	ENSMUST00000136815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040557	Mettl27	ENSMUST00000068617	ENSMUSP00000067814	TRANSLATION	protein_coding	-	CCDS84970.1	1	207	17	2.22	0.5	36.6	0	-4,-5	-	-	9.09	MINOR
ENSMUSG00000040557	Mettl27	ENSMUST00000136246	ENSMUSP00000119451	TRANSLATION	protein_coding	stop	-	3	129	13	1.92	0	36.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040557	Mettl27	ENSMUST00000111219	ENSMUSP00000106850	TRANSLATION	protein_coding	-	CCDS19727.1	1	238	24	3.22	0.5	58.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040557	Mettl27	ENSMUST00000111218	ENSMUSP00000106849	TRANSLATION	protein_coding	-	CCDS19727.1	1	238	24	3.22	0.5	58.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075703	Selenoi	ENSMUST00000145858	ENSMUSP00000114389	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000075703	Selenoi	ENSMUST00000145167	ENSMUSP00000118368	TRANSLATION	protein_coding	-	CCDS51451.1	1	398	0	0	6.3	59.2	13	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000075703	Selenoi	ENSMUST00000197299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075703	Selenoi	ENSMUST00000138001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075703	Selenoi	ENSMUST00000198788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075703	Selenoi	ENSMUST00000151795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075703	Selenoi	ENSMUST00000151468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075703	Selenoi	ENSMUST00000132404	ENSMUSP00000117343	TRANSLATION	nonsense_mediated_decay	-	-	1	198	0	0	0	48.1	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000096259	Gm3106	ENSMUST00000179743	ENSMUSP00000137294	TRANSLATION	protein_coding	-	-	5	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000038056	Kmt2c	ENSMUST00000174734	ENSMUSP00000133482	TRANSLATION	protein_coding	start	-	5	1524	29	5.37	0	270.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038056	Kmt2c	ENSMUST00000172626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038056	Kmt2c	ENSMUST00000172707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038056	Kmt2c	ENSMUST00000173673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038056	Kmt2c	ENSMUST00000172556	ENSMUSP00000133941	TRANSLATION	protein_coding	start	-	5	1748	30	5.37	0	270.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038056	Kmt2c	ENSMUST00000045291	ENSMUSP00000043874	TRANSLATION	protein_coding	-	CCDS39033.1	5	4904	85	11.72	0.5	385	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038056	Kmt2c	ENSMUST00000173174	ENSMUSP00000133304	TRANSLATION	protein_coding	stop	-	1	813	29	2.2	0	74.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038056	Kmt2c	ENSMUST00000173073	ENSMUSP00000134442	TRANSLATION	protein_coding	stop	-	5	1716	55	6.35	0	114.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005103	Wdr1	ENSMUST00000202766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005103	Wdr1	ENSMUST00000201059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000201538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000201330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000202496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005103	Wdr1	ENSMUST00000202199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000200909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000201150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000201456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005103	Wdr1	ENSMUST00000201260	ENSMUSP00000143937	TRANSLATION	protein_coding	-	-	1	333	0	5.72	0	63.5	0	-4,-5	-	-	2.976	MINOR
ENSMUSG00000005103	Wdr1	ENSMUST00000005234	ENSMUSP00000005234	TRANSLATION	protein_coding	-	CCDS51485.1	1	606	0	11.882	15	113.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000066613	Zfp932	ENSMUST00000143639	ENSMUSP00000121749	TRANSLATION	protein_coding	stop	-	5	221	16	3.1	0	148.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066613	Zfp932	ENSMUST00000187241	ENSMUSP00000140446	TRANSLATION	protein_coding	start	-	5	526	60	3.9	0.5	385.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066613	Zfp932	ENSMUST00000142180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066613	Zfp932	ENSMUST00000125213	ENSMUSP00000119843	TRANSLATION	protein_coding	stop	-	2	191	16	2.1	0.5	68.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066613	Zfp932	ENSMUST00000112540	ENSMUSP00000108159	TRANSLATION	protein_coding	-	CCDS59681.1	1	526	60	3.9	0.5	385.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000066613	Zfp932	ENSMUST00000099484	ENSMUSP00000097083	TRANSLATION	protein_coding	-	-	1	65	0	2.1	1.5	79.9	0	-4,-5	-	-	2.4	MINOR
ENSMUSG00000066613	Zfp932	ENSMUST00000112536	ENSMUSP00000108155	TRANSLATION	protein_coding	-	-	5	493	60	2.9	0.5	305.9	0	-4,-5	-	-	11.208	MINOR
ENSMUSG00000029600	Rita1	ENSMUST00000156356	ENSMUSP00000122910	TRANSLATION	protein_coding	start	-	5	91	0	0	0	125.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029600	Rita1	ENSMUST00000147596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029600	Rita1	ENSMUST00000031599	ENSMUSP00000031599	TRANSLATION	protein_coding	-	CCDS51635.1	1	253	0	0	0.5	340.2	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029600	Rita1	ENSMUST00000177800	ENSMUSP00000136946	TRANSLATION	protein_coding	-	CCDS51635.1	5	253	0	0	0.5	340.2	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029600	Rita1	ENSMUST00000111884	ENSMUSP00000107515	TRANSLATION	protein_coding	-	-	2	103	0	0	0	131.8	0	-4,-1	-	-	0	MINOR
ENSMUSG00000029600	Rita1	ENSMUST00000136070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029600	Rita1	ENSMUST00000140554	ENSMUSP00000116344	TRANSLATION	protein_coding	stop	-	5	107	0	0	0	173	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029082	Bst1	ENSMUST00000126976	ENSMUSP00000143382	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0.8	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029082	Bst1	ENSMUST00000101237	ENSMUSP00000098796	TRANSLATION	protein_coding	-	CCDS19264.1	1	311	0	7.5	0.5	331.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029082	Bst1	ENSMUST00000118126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029082	Bst1	ENSMUST00000125838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000145082	ENSMUSP00000114731	TRANSLATION	protein_coding	stop	-	2	286	8	3.91	0	23.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000147544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000134501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000139674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000173355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000118027	ENSMUSP00000114052	TRANSLATION	protein_coding	-	-	5	1266	30	18.392	0	248.6	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000138929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000121739	ENSMUSP00000114049	TRANSLATION	protein_coding	-	-	5	1254	30	17.96	2.9	248.6	0	-4,-5	-	-	16.747	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000174357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000152872	ENSMUSP00000119746	TRANSLATION	protein_coding	start/stop	-	3	296	10	2.25	0	94.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000086200	ENSMUSP00000083376	TRANSLATION	protein_coding	-	-	5	1303	30	18.76	4.1	248.6	0	-4,-5	-	-	18.736	ALTERNATIVE:2
ENSMUSG00000029475	Kdm2b	ENSMUST00000046073	ENSMUSP00000038229	TRANSLATION	protein_coding	-	CCDS39259.1	1	1309	30	18.892	4.1	248.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000029475	Kdm2b	ENSMUST00000132419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000143273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000150543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000129998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029475	Kdm2b	ENSMUST00000156474	ENSMUSP00000118488	TRANSLATION	protein_coding	stop	-	1	514	14	9.46	0	53.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000031435	ENSMUSP00000031435	TRANSLATION	protein_coding	-	CCDS19657.1	1	776	16	8.55	1.7	195.8	0	-4,-5	-	-	3.058	MINOR
ENSMUSG00000029475	Kdm2b	ENSMUST00000123479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029475	Kdm2b	ENSMUST00000127403	ENSMUSP00000120912	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096742	Gm6367	ENSMUST00000178646	ENSMUSP00000136362	TRANSLATION	protein_coding	-	-	5	287	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202950	ENSMUSP00000144257	TRANSLATION	protein_coding	-	CCDS84865.1	5	744	0	1.16	0.5	64.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000114533	ENSMUSP00000110179	TRANSLATION	protein_coding	-	CCDS51460.1	1	715	0	1.16	1.5	64.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201858	ENSMUSP00000143960	TRANSLATION	protein_coding	-	-	1	534	0	1.16	0	64.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202214	ENSMUSP00000144613	TRANSLATION	protein_coding	-	CCDS51460.1	5	715	0	1.16	1.5	64.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000202273	ENSMUSP00000144046	TRANSLATION	protein_coding	start	-	2	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201789	ENSMUSP00000144335	TRANSLATION	protein_coding	start	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029141	Slc4a1ap	ENSMUST00000201925	ENSMUSP00000143852	TRANSLATION	protein_coding	start	-	3	198	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029326	Enoph1	ENSMUST00000200223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029326	Enoph1	ENSMUST00000199518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029326	Enoph1	ENSMUST00000031268	ENSMUSP00000031268	TRANSLATION	protein_coding	-	CCDS39183.1	1	257	3	5.55	8.3	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029326	Enoph1	ENSMUST00000169390	ENSMUSP00000129704	TRANSLATION	protein_coding	-	CCDS39183.1	1	257	3	5.55	8.3	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058558	Rpl5	ENSMUST00000153590	ENSMUSP00000123474	TRANSLATION	protein_coding	stop	-	3	163	0	1.16	0	253.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058558	Rpl5	ENSMUST00000082223	ENSMUSP00000080854	TRANSLATION	protein_coding	-	CCDS39199.1	1	297	0	2.66	21.5	448.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000058558	Rpl5	ENSMUST00000151767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058558	Rpl5	ENSMUST00000140659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058558	Rpl5	ENSMUST00000129944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058558	Rpl5	ENSMUST00000123183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000120618	ENSMUSP00000113995	TRANSLATION	protein_coding	stop	-	5	434	0	0	0	87.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029227	Fip1l1	ENSMUST00000113534	ENSMUSP00000109162	TRANSLATION	protein_coding	-	-	1	508	0	0	0	87.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029227	Fip1l1	ENSMUST00000080164	ENSMUSP00000079059	TRANSLATION	protein_coding	-	CCDS19346.1	1	545	0	0	6.3	87.2	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000029227	Fip1l1	ENSMUST00000202499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000113536	ENSMUSP00000109164	TRANSLATION	protein_coding	-	CCDS51520.1	1	581	0	0	5.1	87.2	0	-4,-5	-	-	7.548	ALTERNATIVE:1
ENSMUSG00000029227	Fip1l1	ENSMUST00000139697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000121950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000135377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000113535	ENSMUSP00000109163	TRANSLATION	protein_coding	-	CCDS51521.1	1	536	0	0	6.3	87.2	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000029227	Fip1l1	ENSMUST00000200979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029227	Fip1l1	ENSMUST00000200787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000201310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029227	Fip1l1	ENSMUST00000125129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043430	Psapl1	ENSMUST00000052224	ENSMUSP00000100594	TRANSLATION	protein_coding	-	CCDS39072.1	-	525	0	0	1.5	237.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000044674	Fzd1	ENSMUST00000054294	ENSMUSP00000058629	TRANSLATION	protein_coding	-	CCDS19072.1	-	642	0	0.4	2.7	592.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048439	Nupl2	ENSMUST00000147392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048439	Nupl2	ENSMUST00000115101	ENSMUSP00000110753	TRANSLATION	nonsense_mediated_decay	-	-	2	161	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048439	Nupl2	ENSMUST00000049887	ENSMUSP00000062766	TRANSLATION	protein_coding	-	CCDS19115.1	1	420	4	0	1.5	0	0	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000048439	Nupl2	ENSMUST00000124150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029455	Aldh2	ENSMUST00000152945	ENSMUSP00000123545	TRANSLATION	protein_coding	stop	-	3	185	0	5.1	0	123.1	0	-3,1	-	-	-1	MINOR
ENSMUSG00000029455	Aldh2	ENSMUST00000031411	ENSMUSP00000031411	TRANSLATION	protein_coding	-	CCDS19638.1	1	519	26	13.41	5.2	610.8	0	-3,1	-	-	20	PRINCIPAL:1
ENSMUSG00000029455	Aldh2	ENSMUST00000129753	ENSMUSP00000142906	TRANSLATION	protein_coding	-	CCDS84951.1	1	471	26	12.08	0.5	553.6	0	-3,1	-	-	11.91	MINOR
ENSMUSG00000029455	Aldh2	ENSMUST00000133033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029455	Aldh2	ENSMUST00000199369	ENSMUSP00000143261	TRANSLATION	protein_coding	start	-	5	229	11	5.83	0	145.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029455	Aldh2	ENSMUST00000196694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029455	Aldh2	ENSMUST00000200541	ENSMUSP00000143034	TRANSLATION	protein_coding	start	-	3	196	4	4.33	0	223	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029650	Slc46a3	ENSMUST00000152064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029650	Slc46a3	ENSMUST00000031655	ENSMUSP00000031655	TRANSLATION	protein_coding	-	CCDS19880.1	1	460	0	0	3.9	50.4	12	-1,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000029650	Slc46a3	ENSMUST00000118527	ENSMUSP00000113879	TRANSLATION	protein_coding	-	CCDS19880.1	1	460	0	0	3.9	50.4	12	-1,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000029650	Slc46a3	ENSMUST00000138244	ENSMUSP00000120032	TRANSLATION	protein_coding	stop	-	2	47	0	0	0	0	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000056310	Tyw1	ENSMUST00000173375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056310	Tyw1	ENSMUST00000040213	ENSMUSP00000037173	TRANSLATION	protein_coding	-	CCDS19712.1	1	721	19	8.1	0.5	186.1	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056310	Tyw1	ENSMUST00000147619	ENSMUSP00000123693	TRANSLATION	protein_coding	stop	-	2	234	19	2.52	0	90.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056310	Tyw1	ENSMUST00000044204	ENSMUSP00000047318	TRANSLATION	protein_coding	-	CCDS19711.1	1	454	19	3.26	0.5	90.6	2	-4,-7	-	-	6.27	MINOR
ENSMUSG00000056310	Tyw1	ENSMUST00000100662	ENSMUSP00000098226	TRANSLATION	protein_coding	-	-	1	386	19	2.52	0	90.6	2	-4,-7	-	-	6.27	MINOR
ENSMUSG00000029436	Mmp17	ENSMUST00000031390	ENSMUSP00000031390	TRANSLATION	protein_coding	-	CCDS19695.1	1	578	28	5.53	0.5	364.5	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000029436	Mmp17	ENSMUST00000177802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029401	Rilpl2	ENSMUST00000031347	ENSMUSP00000031347	TRANSLATION	protein_coding	-	CCDS19676.1	1	197	0	1	1.5	78.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029401	Rilpl2	ENSMUST00000198413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005474	Myl10	ENSMUST00000196068	ENSMUSP00000142570	TRANSLATION	protein_coding	-	CCDS80433.1	1	134	6	2.52	0.5	46.5	0	-4,-5	-	-	11.058	MINOR
ENSMUSG00000005474	Myl10	ENSMUST00000196436	ENSMUSP00000142495	TRANSLATION	protein_coding	-	CCDS80434.1	3	131	10	4.16	0.5	17.9	0	-4,-5	-	-	13.308	MINOR
ENSMUSG00000005474	Myl10	ENSMUST00000005611	ENSMUSP00000005611	TRANSLATION	protein_coding	-	CCDS51668.1	1	147	10	4.66	11.3	46.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005474	Myl10	ENSMUST00000199074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005474	Myl10	ENSMUST00000197186	ENSMUSP00000143165	TRANSLATION	protein_coding	-	CCDS80434.1	1	131	10	4.16	0.5	17.9	0	-4,-5	-	-	13.308	MINOR
ENSMUSG00000005474	Myl10	ENSMUST00000197849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049606	Zfp644	ENSMUST00000142391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049606	Zfp644	ENSMUST00000122980	ENSMUSP00000118856	TRANSLATION	protein_coding	stop	-	3	203	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000127932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000155495	ENSMUSP00000116876	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000127572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000127434	ENSMUSP00000122421	TRANSLATION	protein_coding	stop	-	1	624	19	0.16	0	21	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000200481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049606	Zfp644	ENSMUST00000125895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000112698	ENSMUSP00000108318	TRANSLATION	protein_coding	-	CCDS39196.1	5	1292	30	0.16	0.5	21	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000049606	Zfp644	ENSMUST00000112696	ENSMUSP00000108316	TRANSLATION	protein_coding	-	-	5	1323	30	0.16	0	21	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000049606	Zfp644	ENSMUST00000148192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000137285	ENSMUSP00000114698	TRANSLATION	protein_coding	stop	-	1	287	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000112695	ENSMUSP00000108315	TRANSLATION	protein_coding	-	-	5	105	3	0	6.3	0	0	-4,-6	-	-	2	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000112694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000045466	ENSMUSP00000038047	TRANSLATION	protein_coding	-	CCDS39196.1	1	1292	30	0.16	0.5	21	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000049606	Zfp644	ENSMUST00000156851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049606	Zfp644	ENSMUST00000124263	ENSMUSP00000119893	TRANSLATION	protein_coding	stop	-	5	132	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049606	Zfp644	ENSMUST00000135108	ENSMUSP00000122012	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067220	Cnga1	ENSMUST00000087213	ENSMUSP00000084464	TRANSLATION	protein_coding	-	CCDS19333.1	1	684	13	2.44	0.5	276.4	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000067220	Cnga1	ENSMUST00000201463	ENSMUSP00000143881	TRANSLATION	protein_coding	-	CCDS19333.1	1	684	13	2.44	0.5	276.4	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000067220	Cnga1	ENSMUST00000135701	ENSMUSP00000119886	TRANSLATION	protein_coding	stop	-	1	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067220	Cnga1	ENSMUST00000202230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067220	Cnga1	ENSMUST00000126799	ENSMUSP00000143377	TRANSLATION	protein_coding	-	-	1	91	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000067220	Cnga1	ENSMUST00000169997	ENSMUSP00000132329	TRANSLATION	protein_coding	-	CCDS19333.1	5	684	13	2.44	0.5	276.4	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000007812	Zfp655	ENSMUST00000199003	ENSMUSP00000142825	TRANSLATION	protein_coding	-	CCDS84998.1	2	110	0	0	6.3	0	0	-4,-5	-	-	2.445	MINOR
ENSMUSG00000007812	Zfp655	ENSMUST00000196069	ENSMUSP00000142639	TRANSLATION	protein_coding	-	-	1	87	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000007812	Zfp655	ENSMUST00000200039	ENSMUSP00000143198	TRANSLATION	protein_coding	-	CCDS51698.1	1	181	0	1	7.5	88.8	0	-4,-5	-	-	13.368	MINOR
ENSMUSG00000007812	Zfp655	ENSMUST00000167316	ENSMUSP00000128969	TRANSLATION	protein_coding	-	CCDS19861.1	1	541	27	0.28	2.7	116	0	-4,-5	-	-	14.466	PRINCIPAL:1
ENSMUSG00000007812	Zfp655	ENSMUST00000199322	ENSMUSP00000142754	TRANSLATION	protein_coding	-	-	1	103	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000007812	Zfp655	ENSMUST00000085661	ENSMUSP00000082803	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029379	Cxcl3	ENSMUST00000201840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029379	Cxcl3	ENSMUST00000031326	ENSMUSP00000031326	TRANSLATION	protein_coding	-	CCDS19417.1	1	100	0	1.75	1.5	44.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000106864	Gtf3c2	ENSMUST00000202218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106864	Gtf3c2	ENSMUST00000202300	ENSMUSP00000144249	TRANSLATION	protein_coding	stop	-	2	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000106864	Gtf3c2	ENSMUST00000201087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106864	Gtf3c2	ENSMUST00000202639	ENSMUSP00000144489	TRANSLATION	protein_coding	-	-	5	950	0	0	1	15.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000106864	Gtf3c2	ENSMUST00000201428	ENSMUSP00000144212	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000106864	Gtf3c2	ENSMUST00000201468	ENSMUSP00000144675	TRANSLATION	protein_coding	stop	-	2	228	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000106864	Gtf3c2	ENSMUST00000202254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106864	Gtf3c2	ENSMUST00000088010	ENSMUSP00000085325	TRANSLATION	protein_coding	-	CCDS39053.1	1	907	0	0	0.5	15.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000106864	Gtf3c2	ENSMUST00000201423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106864	Gtf3c2	ENSMUST00000202843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106864	Gtf3c2	ENSMUST00000200871	ENSMUSP00000144427	TRANSLATION	protein_coding	-	-	3	88	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037905	Bri3bp	ENSMUST00000198811	ENSMUSP00000143530	TRANSLATION	protein_coding	start	-	3	150	3	0	0	60.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037905	Bri3bp	ENSMUST00000049040	ENSMUSP00000037609	TRANSLATION	protein_coding	-	CCDS19686.1	1	253	0	0	1.5	220.8	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029148	Nrbp1	ENSMUST00000202505	ENSMUSP00000144292	TRANSLATION	protein_coding	stop	-	3	188	0	4	0	82.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029148	Nrbp1	ENSMUST00000200722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000202576	ENSMUSP00000143872	TRANSLATION	protein_coding	-	CCDS84863.1	1	543	0	6.043	6.4	83.5	0	-4,-5	-	-	14.208	ALTERNATIVE:1
ENSMUSG00000029148	Nrbp1	ENSMUST00000201070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000202875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000200857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000031034	ENSMUSP00000031034	TRANSLATION	protein_coding	-	CCDS19180.1	1	535	0	5.845	7.6	87.1	0	-4,-5	-	-	14.604	PRINCIPAL:3
ENSMUSG00000029148	Nrbp1	ENSMUST00000202801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000202982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029148	Nrbp1	ENSMUST00000201259	ENSMUSP00000144415	TRANSLATION	protein_coding	stop	-	5	62	0	1.325	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029148	Nrbp1	ENSMUST00000202842	ENSMUSP00000143899	TRANSLATION	protein_coding	stop	-	2	88	0	1.925	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061535	C1qtnf7	ENSMUST00000121872	ENSMUSP00000113520	TRANSLATION	protein_coding	-	CCDS19262.1	1	289	4	1.74	12.8	166.6	0	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000061535	C1qtnf7	ENSMUST00000144558	ENSMUSP00000120917	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000061535	C1qtnf7	ENSMUST00000076939	ENSMUSP00000076206	TRANSLATION	protein_coding	-	CCDS51488.1	1	296	4	1.74	7.5	166.6	0	-1,-3	-	-	18.204	MINOR
ENSMUSG00000053873	Aym1	ENSMUST00000066573	ENSMUSP00000068426	TRANSLATION	protein_coding	-	CCDS51619.1	-	45	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000051022	Hs3st1	ENSMUST00000152057	ENSMUSP00000118060	TRANSLATION	protein_coding	stop	-	3	75	6	0.8	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000051022	Hs3st1	ENSMUST00000053116	ENSMUSP00000051055	TRANSLATION	protein_coding	-	CCDS19257.1	1	311	22	2.8	1.5	135.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000051022	Hs3st1	ENSMUST00000117944	ENSMUSP00000113919	TRANSLATION	protein_coding	-	CCDS19257.1	1	311	22	2.8	1.5	135.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000051022	Hs3st1	ENSMUST00000137142	ENSMUSP00000114997	TRANSLATION	protein_coding	stop	-	3	176	13	1.8	0	62.7	0	3,-1	-	-	-1	MINOR
ENSMUSG00000092021	Gbp11	ENSMUST00000171587	ENSMUSP00000132552	TRANSLATION	protein_coding	-	-	1	442	16	6.48	0	626.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000092021	Gbp11	ENSMUST00000100960	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000092060	Bend4	ENSMUST00000201705	ENSMUSP00000144426	TRANSLATION	protein_coding	start	-	5	398	0	0	0	29.4	0	-2,1	-	-	-1	MINOR
ENSMUSG00000092060	Bend4	ENSMUST00000201972	ENSMUSP00000144639	TRANSLATION	protein_coding	-	CCDS51512.1	5	541	0	0	0.5	54.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092060	Bend4	ENSMUST00000169190	ENSMUSP00000132684	TRANSLATION	protein_coding	-	CCDS51512.1	5	541	0	0	0.5	54.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092060	Bend4	ENSMUST00000201528	ENSMUSP00000144507	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092060	Bend4	ENSMUST00000202131	ENSMUSP00000144144	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028944	Prkag2	ENSMUST00000114975	ENSMUSP00000110626	TRANSLATION	protein_coding	-	CCDS51437.1	1	326	46	9.122	6.1	103.1	0	-4,-5	-	-	19.624	ALTERNATIVE:1
ENSMUSG00000028944	Prkag2	ENSMUST00000123749	ENSMUSP00000117149	TRANSLATION	protein_coding	stop	-	5	19	0	0.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028944	Prkag2	ENSMUST00000076306	ENSMUSP00000075651	TRANSLATION	protein_coding	-	CCDS80231.1	1	443	46	9.272	5.1	103.1	0	-4,-2	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000028944	Prkag2	ENSMUST00000150135	ENSMUSP00000114978	TRANSLATION	protein_coding	stop	-	5	244	33	6.792	0	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028944	Prkag2	ENSMUST00000129022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028944	Prkag2	ENSMUST00000135525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028944	Prkag2	ENSMUST00000148531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028944	Prkag2	ENSMUST00000131486	ENSMUSP00000115760	TRANSLATION	protein_coding	stop	-	3	191	23	5	0	25.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028944	Prkag2	ENSMUST00000030784	ENSMUSP00000030784	TRANSLATION	protein_coding	-	CCDS19130.1	1	566	46	9.272	6.3	103.1	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000028944	Prkag2	ENSMUST00000139698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029554	Mad1l1	ENSMUST00000129747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029554	Mad1l1	ENSMUST00000031534	ENSMUSP00000031534	TRANSLATION	protein_coding	-	CCDS19817.1	1	717	0	5.5	7.5	895.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029554	Mad1l1	ENSMUST00000110829	ENSMUSP00000106453	TRANSLATION	nonsense_mediated_decay	-	-	1	514	0	1	0	544.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029554	Mad1l1	ENSMUST00000132832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029554	Mad1l1	ENSMUST00000128579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029554	Mad1l1	ENSMUST00000199237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062372	Otof	ENSMUST00000128177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062372	Otof	ENSMUST00000150734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062372	Otof	ENSMUST00000074171	ENSMUSP00000073803	TRANSLATION	protein_coding	-	CCDS19157.1	1	1997	11	6.43	6.4	524.7	1	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000062372	Otof	ENSMUST00000114747	ENSMUSP00000110395	TRANSLATION	protein_coding	-	CCDS51452.1	1	1992	11	6.43	2.7	517.2	1	-4,-7	-	-	18.18	MINOR
ENSMUSG00000062372	Otof	ENSMUST00000144125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079666	1700015F17Rik	ENSMUST00000156282	ENSMUSP00000122651	TRANSLATION	nonsense_mediated_decay	-	-	1	62	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000079666	1700015F17Rik	ENSMUST00000115447	ENSMUSP00000111107	TRANSLATION	protein_coding	-	CCDS51410.1	1	150	0	0	1.5	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079666	1700015F17Rik	ENSMUST00000128151	ENSMUSP00000121859	TRANSLATION	protein_coding	start	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079416	Gm11111	ENSMUST00000112956	ENSMUSP00000108579	TRANSLATION	protein_coding	start/stop	-	5	33	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000000915	Hip1r	ENSMUST00000198664	ENSMUSP00000143309	TRANSLATION	nonsense_mediated_decay	start	-	3	165	0	3.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000915	Hip1r	ENSMUST00000167325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000915	Hip1r	ENSMUST00000167879	ENSMUSP00000127361	TRANSLATION	protein_coding	stop	-	3	117	3	1.74	0	94	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000915	Hip1r	ENSMUST00000166684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000915	Hip1r	ENSMUST00000171407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000915	Hip1r	ENSMUST00000166258	ENSMUSP00000130766	TRANSLATION	nonsense_mediated_decay	start	-	5	141	0	0.78	0	68.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000915	Hip1r	ENSMUST00000000939	ENSMUSP00000000939	TRANSLATION	protein_coding	-	CCDS39276.1	1	1068	3	13.995	6.3	541.8	0	-4,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000070677	D5Ertd577e	ENSMUST00000202481	ENSMUSP00000143927	TRANSLATION	protein_coding	-	CCDS51561.1	1	481	3	0	1.5	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000070677	D5Ertd577e	ENSMUST00000094593	ENSMUSP00000092174	TRANSLATION	protein_coding	-	CCDS51561.1	1	481	3	0	1.5	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000041638	Gcn1	ENSMUST00000094427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041638	Gcn1	ENSMUST00000122964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041638	Gcn1	ENSMUST00000064454	ENSMUSP00000069432	TRANSLATION	protein_coding	-	CCDS19595.1	1	2671	0	7.355	7.5	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000041638	Gcn1	ENSMUST00000125299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041638	Gcn1	ENSMUST00000137523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041638	Gcn1	ENSMUST00000129424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041638	Gcn1	ENSMUST00000141472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041638	Gcn1	ENSMUST00000139933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041638	Gcn1	ENSMUST00000202584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041638	Gcn1	ENSMUST00000136041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028938	Galntl5	ENSMUST00000030778	ENSMUSP00000030778	TRANSLATION	protein_coding	-	CCDS19132.1	1	431	20	6.4	0.5	98.9	0	-1,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000028938	Galntl5	ENSMUST00000114965	ENSMUSP00000110616	TRANSLATION	protein_coding	-	-	1	398	20	6.4	0	98.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059645	Gm7361	ENSMUST00000074148	ENSMUSP00000073781	TRANSLATION	protein_coding	-	CCDS59673.1	1	267	0	0	0.5	85.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048163	Selplg	ENSMUST00000202555	ENSMUSP00000144186	TRANSLATION	protein_coding	start	-	3	72	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000048163	Selplg	ENSMUST00000100874	ENSMUSP00000098436	TRANSLATION	protein_coding	-	CCDS51621.1	1	417	0	0	1.5	0	1	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000048163	Selplg	ENSMUST00000199109	ENSMUSP00000143052	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000048163	Selplg	ENSMUST00000198891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048163	Selplg	ENSMUST00000201194	ENSMUSP00000144450	TRANSLATION	protein_coding	start	-	2	63	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000048163	Selplg	ENSMUST00000201931	ENSMUSP00000143912	TRANSLATION	protein_coding	start	-	2	173	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029380	Cxcl1	ENSMUST00000201245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029380	Cxcl1	ENSMUST00000031327	ENSMUSP00000031327	TRANSLATION	protein_coding	-	CCDS39143.1	1	96	0	1.75	1.5	56.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029348	Asphd2	ENSMUST00000199095	ENSMUSP00000142842	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000029348	Asphd2	ENSMUST00000199906	ENSMUSP00000142332	TRANSLATION	protein_coding	stop	-	2	63	0	0	0	0	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000029348	Asphd2	ENSMUST00000200227	ENSMUSP00000142729	TRANSLATION	protein_coding	stop	-	3	155	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000029348	Asphd2	ENSMUST00000196256	ENSMUSP00000143290	TRANSLATION	protein_coding	stop	-	2	92	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000029348	Asphd2	ENSMUST00000198357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029348	Asphd2	ENSMUST00000031291	ENSMUSP00000031291	TRANSLATION	protein_coding	-	CCDS19542.1	1	343	0	2.16	6.7	166.8	1	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029348	Asphd2	ENSMUST00000197585	ENSMUSP00000142418	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000038342	Mlxip	ENSMUST00000111596	ENSMUSP00000107223	TRANSLATION	protein_coding	-	CCDS39268.1	1	614	0	2.92	0.5	0	0	-4,-2	-	-	6	MINOR
ENSMUSG00000038342	Mlxip	ENSMUST00000068237	ENSMUSP00000064943	TRANSLATION	protein_coding	-	CCDS19662.1	1	917	0	2.92	1.5	35.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038342	Mlxip	ENSMUST00000199458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038342	Mlxip	ENSMUST00000135961	ENSMUSP00000120510	TRANSLATION	nonsense_mediated_decay	start	-	1	241	0	0	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029556	Hnf1a	ENSMUST00000184027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029556	Hnf1a	ENSMUST00000176911	ENSMUSP00000135539	TRANSLATION	nonsense_mediated_decay	-	-	5	119	6	0.798	0	48.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029556	Hnf1a	ENSMUST00000031535	ENSMUSP00000031535	TRANSLATION	protein_coding	-	CCDS19577.1	1	628	6	3.93	6.3	644.7	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000029556	Hnf1a	ENSMUST00000176550	ENSMUSP00000135678	TRANSLATION	nonsense_mediated_decay	-	-	5	247	6	3.062	0	188	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029213	Commd8	ENSMUST00000199767	ENSMUSP00000143790	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029213	Commd8	ENSMUST00000013693	ENSMUSP00000013693	TRANSLATION	protein_coding	-	CCDS39108.1	1	183	0	0	7.5	61.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029213	Commd8	ENSMUST00000196241	ENSMUSP00000142937	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029213	Commd8	ENSMUST00000198951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029213	Commd8	ENSMUST00000196152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061288	Taok3	ENSMUST00000126813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061288	Taok3	ENSMUST00000111978	ENSMUSP00000107609	TRANSLATION	protein_coding	-	CCDS39233.1	1	898	25	8.83	12.8	215.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000061288	Taok3	ENSMUST00000145640	ENSMUSP00000116920	TRANSLATION	protein_coding	stop	-	1	561	25	8.83	0	215.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061288	Taok3	ENSMUST00000153709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061288	Taok3	ENSMUST00000179276	ENSMUSP00000136750	TRANSLATION	protein_coding	-	CCDS39233.1	5	898	25	8.83	12.8	215.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000061288	Taok3	ENSMUST00000092889	ENSMUSP00000090565	TRANSLATION	protein_coding	-	CCDS39233.1	5	898	25	8.83	12.8	215.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000061288	Taok3	ENSMUST00000127814	ENSMUSP00000119998	TRANSLATION	protein_coding	start/stop	-	3	239	11	5.08	0	134.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061288	Taok3	ENSMUST00000125738	ENSMUSP00000117841	TRANSLATION	protein_coding	stop	-	3	109	18	3.08	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061288	Taok3	ENSMUST00000111975	ENSMUSP00000107606	TRANSLATION	protein_coding	-	-	1	438	0	0	3.6	0	0	-4,-7	-	-	0.88	MINOR
ENSMUSG00000061288	Taok3	ENSMUST00000128720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046709	Mapk10	ENSMUST00000238446	ENSMUSP00000158744	TRANSLATION	protein_coding	-	-	-	478	20	10.75	5.9	216.1	0	-4,-5	-	-	18.994	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000142444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046709	Mapk10	ENSMUST00000128869	ENSMUSP00000143448	TRANSLATION	protein_coding	-	-	1	178	12	3.75	0	138	0	-4,-7	-	-	1.914	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000152609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046709	Mapk10	ENSMUST00000112846	ENSMUSP00000108467	TRANSLATION	protein_coding	-	-	1	418	20	9.75	10.8	216.1	0	-4,-5	-	-	18.056	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000136595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046709	Mapk10	ENSMUST00000112848	ENSMUSP00000108469	TRANSLATION	protein_coding	-	-	1	494	20	10.75	0	216.1	0	-4,-5	-	-	17.934	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000112847	ENSMUSP00000108468	TRANSLATION	protein_coding	-	CCDS39185.1	1	464	20	10.75	17.5	216.1	0	-4,-5	-	-	21.502	PRINCIPAL:3
ENSMUSG00000046709	Mapk10	ENSMUST00000170792	ENSMUSP00000127193	TRANSLATION	protein_coding	-	CCDS39185.1	1	464	20	10.75	17.5	216.1	0	-4,-5	-	-	21.502	PRINCIPAL:3
ENSMUSG00000046709	Mapk10	ENSMUST00000141573	ENSMUSP00000142798	TRANSLATION	nonsense_mediated_decay	-	-	5	173	10	2.75	0	31.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000135134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046709	Mapk10	ENSMUST00000133069	ENSMUSP00000143609	TRANSLATION	protein_coding	-	-	2	252	20	5.5	0	152.6	0	-4,-5	-	-	8.124	MINOR
ENSMUSG00000046709	Mapk10	ENSMUST00000086854	ENSMUSP00000084065	TRANSLATION	protein_coding	-	CCDS80350.1	1	464	20	10.75	19.5	217.2	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000018076	Med13l	ENSMUST00000100816	ENSMUSP00000098379	TRANSLATION	protein_coding	-	CCDS57375.1	2	2207	0	0	0.5	819.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000018076	Med13l	ENSMUST00000201614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018076	Med13l	ENSMUST00000202787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018076	Med13l	ENSMUST00000202538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018076	Med13l	ENSMUST00000201010	ENSMUSP00000144092	TRANSLATION	protein_coding	-	CCDS84948.1	5	2216	0	0	0.5	817	0	-4,-5	-	-	5.874	ALTERNATIVE:2
ENSMUSG00000018076	Med13l	ENSMUST00000201696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095296	Gm8906	ENSMUST00000164651	ENSMUSP00000128633	TRANSLATION	protein_coding	start	-	5	181	0	0	0	81.3	0	-4,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000095296	Gm8906	ENSMUST00000179375	ENSMUSP00000136666	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	81.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000029158	Yipf7	ENSMUST00000202423	ENSMUSP00000144444	TRANSLATION	protein_coding	stop	-	3	108	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029158	Yipf7	ENSMUST00000031045	ENSMUSP00000031045	TRANSLATION	protein_coding	-	CCDS19321.1	1	254	0	0	3.9	42.1	4	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000128842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000135588	ENSMUSP00000120962	TRANSLATION	protein_coding	start	-	3	34	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000123941	ENSMUSP00000120792	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000016086	ENSMUSP00000016086	TRANSLATION	protein_coding	-	CCDS19719.1	1	936	4	4.51	0.5	177.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000152587	ENSMUSP00000122822	TRANSLATION	protein_coding	start	-	3	45	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015942	Gtf2ird2	ENSMUST00000201098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001467	Cyp51	ENSMUST00000199909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001467	Cyp51	ENSMUST00000129448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001467	Cyp51	ENSMUST00000001507	ENSMUSP00000001507	TRANSLATION	protein_coding	-	CCDS19071.1	1	503	28	9.1	3.9	253.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000001467	Cyp51	ENSMUST00000151539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041453	Rpl21	ENSMUST00000035983	ENSMUSP00000041652	TRANSLATION	protein_coding	-	CCDS19872.1	1	160	0	0	21.5	174.7	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041453	Rpl21	ENSMUST00000151871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041453	Rpl21	ENSMUST00000075453	ENSMUSP00000106213	TRANSLATION	protein_coding	-	CCDS19872.1	1	160	0	0	21.5	174.7	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041453	Rpl21	ENSMUST00000154768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041453	Rpl21	ENSMUST00000099272	ENSMUSP00000106211	TRANSLATION	protein_coding	-	CCDS19872.1	3	160	0	0	21.5	174.7	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041453	Rpl21	ENSMUST00000135345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106445	Gm21190	ENSMUST00000196384	ENSMUSP00000143589	TRANSLATION	protein_coding	-	CCDS80210.1	1	266	0	0	0.5	99.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000056367	Actr3b	ENSMUST00000198693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056367	Actr3b	ENSMUST00000128727	ENSMUSP00000121629	TRANSLATION	protein_coding	-	CCDS80232.1	1	330	16	8.5	8.6	120.5	0	-4,-5	-	-	4.644	MINOR
ENSMUSG00000056367	Actr3b	ENSMUST00000088244	ENSMUSP00000085578	TRANSLATION	protein_coding	-	CCDS19136.1	1	418	22	11	19.5	292.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029500	Pgam5	ENSMUST00000196381	ENSMUSP00000143477	TRANSLATION	protein_coding	stop	-	5	179	4	3.5	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000029500	Pgam5	ENSMUST00000059229	ENSMUSP00000057760	TRANSLATION	protein_coding	-	CCDS19523.1	1	287	6	5.1	7.5	0	0	0,-5	-	-	14.7	PRINCIPAL:3
ENSMUSG00000029500	Pgam5	ENSMUST00000136738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029500	Pgam5	ENSMUST00000112505	ENSMUSP00000108124	TRANSLATION	protein_coding	-	CCDS51606.1	1	288	6	5.25	7.5	0	0	0,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000023353	Agap3	ENSMUST00000197513	ENSMUSP00000142875	TRANSLATION	protein_coding	start	-	1	445	4	6.48	0	200.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023353	Agap3	ENSMUST00000199856	ENSMUSP00000142529	TRANSLATION	protein_coding	-	-	5	578	15	4.65	2.7	62.6	0	-4,-6	-	-	3.336	MINOR
ENSMUSG00000023353	Agap3	ENSMUST00000024123	ENSMUSP00000024123	TRANSLATION	protein_coding	-	CCDS19122.1	1	910	19	11.13	0.5	219.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023353	Agap3	ENSMUST00000199647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023353	Agap3	ENSMUST00000212381	ENSMUSP00000148770	TRANSLATION	protein_coding	-	-	5	396	15	4.65	0	62.6	0	-4,-7	-	-	3.336	MINOR
ENSMUSG00000023353	Agap3	ENSMUST00000199250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066867	Oas1e	ENSMUST00000200786	ENSMUSP00000144442	TRANSLATION	nonsense_mediated_decay	-	-	3	106	0	1.28	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066867	Oas1e	ENSMUST00000100785	ENSMUSP00000098348	TRANSLATION	protein_coding	-	CCDS39243.1	1	356	13	5.35	0.5	240.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000066867	Oas1e	ENSMUST00000201172	ENSMUSP00000144529	TRANSLATION	protein_coding	-	CCDS84950.1	1	386	13	5.35	0.5	239.5	0	-4,-5	-	-	17.928	ALTERNATIVE:2
ENSMUSG00000029287	Tgfbr3	ENSMUST00000146591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029287	Tgfbr3	ENSMUST00000136882	ENSMUSP00000123644	TRANSLATION	protein_coding	start	-	2	156	3	2	0	26.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000029287	Tgfbr3	ENSMUST00000138469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029287	Tgfbr3	ENSMUST00000031224	ENSMUSP00000031224	TRANSLATION	protein_coding	-	CCDS19499.1	1	850	3	4	1.5	155.5	1	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037822	Smim14	ENSMUST00000144562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037822	Smim14	ENSMUST00000200111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037822	Smim14	ENSMUST00000125954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037822	Smim14	ENSMUST00000198981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037822	Smim14	ENSMUST00000139122	ENSMUSP00000122363	TRANSLATION	protein_coding	-	CCDS19309.1	1	99	0	0	12.8	129.7	1	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000037822	Smim14	ENSMUST00000135258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037822	Smim14	ENSMUST00000149167	ENSMUSP00000118195	TRANSLATION	protein_coding	stop	-	5	30	0	0	2	55.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037822	Smim14	ENSMUST00000121661	ENSMUSP00000113456	TRANSLATION	protein_coding	-	CCDS19309.1	3	99	0	0	12.8	129.7	1	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000037822	Smim14	ENSMUST00000040532	ENSMUSP00000040511	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0	0	123.1	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000095918	Gm5861	ENSMUST00000171093	ENSMUSP00000132429	TRANSLATION	protein_coding	start	-	1	180	0	0	0	81.7	0	-4,-7	-	-	-1	PRINCIPAL:3
ENSMUSG00000095918	Gm5861	ENSMUST00000168407	ENSMUSP00000127608	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	81.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000029627	Zkscan14	ENSMUST00000031632	ENSMUSP00000031632	TRANSLATION	protein_coding	-	CCDS19860.1	1	521	28	2.4	0.5	313.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029627	Zkscan14	ENSMUST00000162220	ENSMUSP00000124196	TRANSLATION	protein_coding	stop	-	3	231	6	0.4	0	51.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029627	Zkscan14	ENSMUST00000198959	ENSMUSP00000143630	TRANSLATION	protein_coding	-	-	-	146	0	1	0	132.1	0	-4,-6	-	-	2.502	MINOR
ENSMUSG00000040570	Rundc3b	ENSMUST00000047485	ENSMUSP00000040108	TRANSLATION	protein_coding	-	CCDS19083.1	1	408	0	3.47	1.8	89.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000040570	Rundc3b	ENSMUST00000115378	ENSMUSP00000111036	TRANSLATION	protein_coding	-	CCDS84841.1	5	457	0	3.47	1.8	89.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000067642	Adgrf3	ENSMUST00000125367	ENSMUSP00000120958	TRANSLATION	protein_coding	start	-	2	107	0	0.56	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000067642	Adgrf3	ENSMUST00000088117	ENSMUSP00000085440	TRANSLATION	protein_coding	-	CCDS51450.1	1	991	0	1.88	0.5	148.2	6	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000067642	Adgrf3	ENSMUST00000135322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001168	Oas1h	ENSMUST00000072476	ENSMUSP00000072297	TRANSLATION	protein_coding	-	CCDS19629.1	1	369	10	4.7	0.5	280.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000001168	Oas1h	ENSMUST00000171820	ENSMUSP00000132033	TRANSLATION	protein_coding	-	CCDS51636.1	5	239	6	2.7	0.5	95.6	0	-4,-7	-	-	5.334	MINOR
ENSMUSG00000029710	Ephb4	ENSMUST00000111055	ENSMUSP00000106684	TRANSLATION	protein_coding	-	CCDS51671.1	1	996	19	11.775	1.5	794.3	1	1,-4	-	-	17.842	MINOR
ENSMUSG00000029710	Ephb4	ENSMUST00000144296	ENSMUSP00000115731	TRANSLATION	nonsense_mediated_decay	-	-	1	987	19	11.94	3.9	794.3	1	1,-4	-	-	-1	MINOR
ENSMUSG00000029710	Ephb4	ENSMUST00000111054	ENSMUSP00000106683	TRANSLATION	protein_coding	-	-	5	935	19	11.34	0	725.8	1	1,-4	-	-	12.69	MINOR
ENSMUSG00000029710	Ephb4	ENSMUST00000166239	ENSMUSP00000130275	TRANSLATION	protein_coding	-	CCDS19767.1	5	987	19	11.94	3.9	794.3	1	1,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000029710	Ephb4	ENSMUST00000061244	ENSMUSP00000051622	TRANSLATION	protein_coding	-	CCDS19767.1	1	987	19	11.94	3.9	794.3	1	1,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000034384	Barhl2	ENSMUST00000086795	ENSMUSP00000084005	TRANSLATION	protein_coding	-	CCDS19497.1	1	384	0	1	3.9	75.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000029182	Fam166c	ENSMUST00000031078	ENSMUSP00000031078	TRANSLATION	protein_coding	-	CCDS19158.1	1	200	0	0	3.9	90.7	0	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000029182	Fam166c	ENSMUST00000127815	ENSMUSP00000142635	TRANSLATION	protein_coding	-	-	1	117	0	0	0	90.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000029182	Fam166c	ENSMUST00000114743	ENSMUSP00000110391	TRANSLATION	protein_coding	-	-	5	155	0	0	0.5	90.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000029182	Fam166c	ENSMUST00000199129	ENSMUSP00000142583	TRANSLATION	nonsense_mediated_decay	-	-	5	116	0	0	0	90.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091059	Vmn2r14	ENSMUST00000233137	ENSMUSP00000156478	TRANSLATION	nonsense_mediated_decay	-	-	-	848	4	2.92	0.5	379.4	7	2,-3	-	-	-1	MINOR
ENSMUSG00000091059	Vmn2r14	ENSMUST00000170341	ENSMUSP00000128015	TRANSLATION	protein_coding	-	CCDS51600.1	5	848	4	2.92	0.5	379.4	7	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000029551	Psmg3	ENSMUST00000182743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029551	Psmg3	ENSMUST00000031531	ENSMUSP00000031531	TRANSLATION	protein_coding	-	CCDS19815.1	1	122	0	2	7.5	98	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029551	Psmg3	ENSMUST00000182602	ENSMUSP00000138161	TRANSLATION	protein_coding	-	CCDS19815.1	1	122	0	2	7.5	98	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000012520	Phox2b	ENSMUST00000012664	ENSMUSP00000012664	TRANSLATION	protein_coding	-	CCDS19316.1	1	314	0	1	6.6	80.3	0	-4,-5	-	-	13.262	PRINCIPAL:1
ENSMUSG00000012520	Phox2b	ENSMUST00000174251	ENSMUSP00000134216	TRANSLATION	protein_coding	-	-	1	192	0	1.14	0	50.6	0	-4,-5	-	-	9.78	MINOR
ENSMUSG00000029598	Plbd2	ENSMUST00000131831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029598	Plbd2	ENSMUST00000031597	ENSMUSP00000031597	TRANSLATION	protein_coding	-	CCDS19620.1	1	594	0	11.75	0.5	580.1	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000029598	Plbd2	ENSMUST00000151361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109771	Gm35315	ENSMUST00000211397	ENSMUSP00000147992	TRANSLATION	protein_coding	stop	-	3	67	2	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109771	Gm35315	ENSMUST00000210052	ENSMUSP00000147534	TRANSLATION	protein_coding	-	-	5	571	65	2.85	0.5	412.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000109771	Gm35315	ENSMUST00000209865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029465	Arpc3	ENSMUST00000141395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029465	Arpc3	ENSMUST00000196969	ENSMUSP00000143210	TRANSLATION	protein_coding	start	-	3	142	0	4	0	212	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029465	Arpc3	ENSMUST00000111713	ENSMUSP00000107342	TRANSLATION	protein_coding	-	-	3	163	0	4.4	0	227.3	0	-4,-7	-	-	7.17	MINOR
ENSMUSG00000029465	Arpc3	ENSMUST00000148913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029465	Arpc3	ENSMUST00000031421	ENSMUSP00000031421	TRANSLATION	protein_coding	-	-	3	170	0	5.08	0	258.9	0	-4,-5	-	-	10.428	MINOR
ENSMUSG00000029465	Arpc3	ENSMUST00000126247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029465	Arpc3	ENSMUST00000111716	ENSMUSP00000107345	TRANSLATION	protein_coding	-	-	2	161	0	4.4	0	227.2	0	-4,-6	-	-	7.164	MINOR
ENSMUSG00000029465	Arpc3	ENSMUST00000102525	ENSMUSP00000099584	TRANSLATION	protein_coding	-	CCDS19648.1	1	178	0	5.41	19.5	274.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029307	Dmp1	ENSMUST00000066708	ENSMUSP00000068053	TRANSLATION	protein_coding	-	CCDS19484.1	1	503	0	0	1.5	672.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029703	Lrwd1	ENSMUST00000128255	ENSMUSP00000119546	TRANSLATION	protein_coding	start/stop	-	1	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029703	Lrwd1	ENSMUST00000149673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000006301	ENSMUSP00000006301	TRANSLATION	protein_coding	-	CCDS51666.1	1	648	0	2.55	1.5	48.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029703	Lrwd1	ENSMUST00000148475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000142272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000199786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000139908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000132976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029703	Lrwd1	ENSMUST00000150406	ENSMUSP00000121513	TRANSLATION	protein_coding	stop	-	3	216	0	1.764	0	31.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054417	Cyp3a44	ENSMUST00000067479	ENSMUSP00000069932	TRANSLATION	protein_coding	-	CCDS19864.1	1	504	31	11.1	5.1	440.1	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004952	Rasa4	ENSMUST00000140972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000042135	ENSMUSP00000037869	TRANSLATION	protein_coding	-	CCDS39324.1	1	802	24	11.32	2.7	377.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000004952	Rasa4	ENSMUST00000100570	ENSMUSP00000098136	TRANSLATION	protein_coding	-	CCDS39325.1	1	756	24	10.32	0.5	325.7	0	-4,-7	-	-	12.882	MINOR
ENSMUSG00000004952	Rasa4	ENSMUST00000199502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000134509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000152723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000145294	ENSMUSP00000120203	TRANSLATION	nonsense_mediated_decay	start	-	5	141	7	2.24	0	59	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004952	Rasa4	ENSMUST00000122887	ENSMUSP00000118929	TRANSLATION	protein_coding	start	-	2	178	3	1.44	0	72.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004952	Rasa4	ENSMUST00000131353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000135344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000125048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004952	Rasa4	ENSMUST00000125247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004952	Rasa4	ENSMUST00000130598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000196604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000030968	ENSMUSP00000030968	TRANSLATION	protein_coding	-	CCDS19281.1	1	248	0	0	6.3	171.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000199818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000195960	ENSMUSP00000142685	TRANSLATION	nonsense_mediated_decay	start	-	2	59	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000197915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000176521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000197072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000200566	ENSMUSP00000142613	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029089	5730480H06Rik	ENSMUST00000196950	ENSMUSP00000143072	TRANSLATION	protein_coding	-	CCDS19281.1	1	248	0	0	6.3	171.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000029394	Cdk2ap1	ENSMUST00000196910	ENSMUSP00000143268	TRANSLATION	protein_coding	-	-	2	87	0	1.75	11.6	74.7	0	-4,-6	-	-	14.892	PRINCIPAL:1
ENSMUSG00000029394	Cdk2ap1	ENSMUST00000031341	ENSMUSP00000031341	TRANSLATION	protein_coding	-	CCDS39279.1	1	114	0	1.75	7.5	76.1	0	-4,-7	-	-	13.839	MINOR
ENSMUSG00000029394	Cdk2ap1	ENSMUST00000111472	ENSMUSP00000107097	TRANSLATION	protein_coding	-	-	5	87	0	1.75	11.6	74.7	0	-4,-6	-	-	14.892	PRINCIPAL:1
ENSMUSG00000029394	Cdk2ap1	ENSMUST00000111474	ENSMUSP00000107099	TRANSLATION	protein_coding	-	-	2	87	0	1.75	11.6	74.7	0	-4,-6	-	-	14.892	PRINCIPAL:1
ENSMUSG00000029394	Cdk2ap1	ENSMUST00000111473	ENSMUSP00000107098	TRANSLATION	protein_coding	-	-	1	87	0	1.75	11.6	74.7	0	-4,-6	-	-	14.892	PRINCIPAL:1
ENSMUSG00000044716	Dok7	ENSMUST00000155097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044716	Dok7	ENSMUST00000114270	ENSMUSP00000109909	TRANSLATION	protein_coding	-	-	1	504	0	4.66	0	33.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044716	Dok7	ENSMUST00000101298	ENSMUSP00000098856	TRANSLATION	protein_coding	-	-	1	360	0	2.16	0	0	0	-3,-4	-	-	1.002	MINOR
ENSMUSG00000044716	Dok7	ENSMUST00000133381	ENSMUSP00000116023	TRANSLATION	protein_coding	stop	-	3	114	0	2.16	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044716	Dok7	ENSMUST00000050709	ENSMUSP00000059538	TRANSLATION	protein_coding	-	-	1	570	0	3.5	1.5	33.2	0	-4,-6	-	-	9.678	MINOR
ENSMUSG00000039771	Polr2j	ENSMUST00000111127	ENSMUSP00000106757	TRANSLATION	protein_coding	-	-	2	111	0	2.5	0	97.7	0	-4,-5	-	-	11.298	MINOR
ENSMUSG00000039771	Polr2j	ENSMUST00000111129	ENSMUSP00000106759	TRANSLATION	protein_coding	-	-	3	87	0	1.83	0	63.2	0	-4,-5	-	-	7.764	MINOR
ENSMUSG00000039771	Polr2j	ENSMUST00000041366	ENSMUSP00000038505	TRANSLATION	protein_coding	-	CCDS19751.1	1	117	0	2.83	19.5	97.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000095550	Gm21671	ENSMUST00000162387	ENSMUSP00000133924	TRANSLATION	protein_coding	-	CCDS59670.1	5	267	0	0	0.5	81.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029596	Sdsl	ENSMUST00000132916	ENSMUSP00000120868	TRANSLATION	protein_coding	stop	-	5	120	3	2.5	0	92.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029596	Sdsl	ENSMUST00000052258	ENSMUSP00000058198	TRANSLATION	protein_coding	-	CCDS19618.1	1	329	17	6.25	5.1	241.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029596	Sdsl	ENSMUST00000031594	ENSMUSP00000031594	TRANSLATION	protein_coding	-	CCDS19618.1	1	329	17	6.25	5.1	241.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000050248	Evc2	ENSMUST00000101258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050248	Evc2	ENSMUST00000159854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050248	Evc2	ENSMUST00000159915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050248	Evc2	ENSMUST00000056365	ENSMUSP00000055130	TRANSLATION	protein_coding	-	CCDS19248.1	1	1220	0	0	0.5	624.2	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029152	Ociad1	ENSMUST00000200935	ENSMUSP00000144515	TRANSLATION	protein_coding	-	CCDS80300.1	1	196	0	0	6.5	122.5	0	-4,-5	-	-	8.538	ALTERNATIVE:1
ENSMUSG00000029152	Ociad1	ENSMUST00000031038	ENSMUSP00000031038	TRANSLATION	protein_coding	-	CCDS19339.1	1	247	0	0	7.5	122.5	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000029152	Ociad1	ENSMUST00000201556	ENSMUSP00000144227	TRANSLATION	protein_coding	-	-	3	136	0	0	0	122.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029152	Ociad1	ENSMUST00000166823	ENSMUSP00000128805	TRANSLATION	protein_coding	-	CCDS51518.1	1	189	0	0	6.5	122.5	0	-4,-5	-	-	8.538	ALTERNATIVE:1
ENSMUSG00000029152	Ociad1	ENSMUST00000201739	ENSMUSP00000143867	TRANSLATION	nonsense_mediated_decay	start	-	5	25	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029152	Ociad1	ENSMUST00000202250	ENSMUSP00000143799	TRANSLATION	protein_coding	-	CCDS51518.1	2	189	0	0	6.5	122.5	0	-4,-5	-	-	8.538	ALTERNATIVE:1
ENSMUSG00000029152	Ociad1	ENSMUST00000201505	ENSMUSP00000143869	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029152	Ociad1	ENSMUST00000071081	ENSMUSP00000069412	TRANSLATION	protein_coding	-	CCDS51518.1	3	189	0	0	6.5	122.5	0	-4,-5	-	-	8.538	ALTERNATIVE:1
ENSMUSG00000029152	Ociad1	ENSMUST00000201191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029152	Ociad1	ENSMUST00000202237	ENSMUSP00000144102	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	73.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045348	Nyap1	ENSMUST00000118326	ENSMUSP00000113397	TRANSLATION	protein_coding	-	CCDS19775.1	1	833	0	0	1.5	766.1	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000045348	Nyap1	ENSMUST00000061789	ENSMUSP00000058217	TRANSLATION	protein_coding	-	CCDS19775.1	5	833	0	0	1.5	766.1	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000045348	Nyap1	ENSMUST00000212152	ENSMUSP00000148318	TRANSLATION	protein_coding	-	CCDS84980.1	1	832	0	0	1.5	763.6	0	-4,-6	-	-	5.85	ALTERNATIVE:2
ENSMUSG00000045348	Nyap1	ENSMUST00000149512	ENSMUSP00000114694	TRANSLATION	protein_coding	stop	-	5	790	0	0	0	583.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005907	Pex1	ENSMUST00000199035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000199213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000121291	ENSMUSP00000113304	TRANSLATION	protein_coding	-	CCDS80201.1	5	1284	30	13.2734	1.5	403	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000005907	Pex1	ENSMUST00000195894	ENSMUSP00000142620	TRANSLATION	protein_coding	-	-	3	143	0	2.75	0	122.6	0	-3,-1	-	-	0	MINOR
ENSMUSG00000005907	Pex1	ENSMUST00000196692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000006061	ENSMUSP00000006061	TRANSLATION	protein_coding	-	CCDS19065.1	1	1244	30	13.2734	0.5	403	0	-3,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000005907	Pex1	ENSMUST00000126545	ENSMUSP00000121813	TRANSLATION	protein_coding	start/stop	-	3	213	10	1.9934	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005907	Pex1	ENSMUST00000143959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000143132	ENSMUSP00000116645	TRANSLATION	nonsense_mediated_decay	start	-	5	76	0	0.9384	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005907	Pex1	ENSMUST00000196124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000197167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000196432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000123268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005907	Pex1	ENSMUST00000142516	ENSMUSP00000116474	TRANSLATION	protein_coding	stop	-	3	69	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038276	Asic3	ENSMUST00000198442	ENSMUSP00000142593	TRANSLATION	nonsense_mediated_decay	start	-	3	70	0	2	0	42.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038276	Asic3	ENSMUST00000197210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038276	Asic3	ENSMUST00000049346	ENSMUSP00000039914	TRANSLATION	protein_coding	-	CCDS80225.1	1	440	0	3.7	0.5	210.5	1	-4,-7	-	-	0	MINOR
ENSMUSG00000038276	Asic3	ENSMUST00000198241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038276	Asic3	ENSMUST00000196296	ENSMUSP00000143083	TRANSLATION	protein_coding	-	CCDS51433.1	5	530	0	6.75	2.7	321.1	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003974	Grm3	ENSMUST00000004076	ENSMUSP00000004076	TRANSLATION	protein_coding	-	CCDS19090.1	1	879	21	3.44	7.6	613.2	0	1,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000066278	Vps37b	ENSMUST00000040967	ENSMUSP00000047980	TRANSLATION	protein_coding	-	CCDS19670.1	1	285	0	0	6.3	127.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000066278	Vps37b	ENSMUST00000199741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066278	Vps37b	ENSMUST00000199306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090326	Dthd1	ENSMUST00000170704	ENSMUSP00000131534	TRANSLATION	protein_coding	-	CCDS51507.1	5	795	0	0.98	0.5	37	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000090326	Dthd1	ENSMUST00000238474	ENSMUSP00000158635	TRANSLATION	protein_coding	-	-	-	905	0	0.98	0	37	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000006642	Tcf23	ENSMUST00000006818	ENSMUSP00000006818	TRANSLATION	protein_coding	-	CCDS19168.1	1	209	0	0.6	0.5	42.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029482	Aacs	ENSMUST00000196556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029482	Aacs	ENSMUST00000131355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029482	Aacs	ENSMUST00000199978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029482	Aacs	ENSMUST00000200286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029482	Aacs	ENSMUST00000031445	ENSMUSP00000031445	TRANSLATION	protein_coding	-	CCDS19687.1	1	672	22	12.69	7.6	187.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029482	Aacs	ENSMUST00000144361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029621	Arpc1a	ENSMUST00000142276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029621	Arpc1a	ENSMUST00000127694	ENSMUSP00000143026	TRANSLATION	nonsense_mediated_decay	-	-	5	262	0	4.75	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029621	Arpc1a	ENSMUST00000134835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029621	Arpc1a	ENSMUST00000031625	ENSMUSP00000031625	TRANSLATION	protein_coding	-	CCDS19855.1	1	370	0	7.8	19.5	41.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029621	Arpc1a	ENSMUST00000147564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029621	Arpc1a	ENSMUST00000124379	ENSMUSP00000114421	TRANSLATION	protein_coding	stop	-	5	135	0	2.75	0	24.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079173	Zan	ENSMUST00000197503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079173	Zan	ENSMUST00000164178	ENSMUSP00000132895	TRANSLATION	protein_coding	-	CCDS51672.1	5	5420	0	1.44	0.5	3423.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079173	Zan	ENSMUST00000130056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079173	Zan	ENSMUST00000117564	ENSMUSP00000114068	TRANSLATION	protein_coding	-	CCDS51672.1	5	5420	0	1.44	0.5	3423.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079173	Zan	ENSMUST00000150470	ENSMUSP00000114562	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	0	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029344	Tpst2	ENSMUST00000071455	ENSMUSP00000071399	TRANSLATION	protein_coding	-	-	1	376	11	4	4.8	200	0	1,-3	-	-	19	ALTERNATIVE:1
ENSMUSG00000029344	Tpst2	ENSMUST00000151947	ENSMUSP00000114592	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000029344	Tpst2	ENSMUST00000239473	ENSMUSP00000159350	TRANSLATION	protein_coding	-	CCDS19538.2	-	390	11	4	1.5	200	0	1,-5	-	-	18.132	PRINCIPAL:2
ENSMUSG00000029344	Tpst2	ENSMUST00000139482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029344	Tpst2	ENSMUST00000198502	ENSMUSP00000142679	TRANSLATION	protein_coding	start	-	5	122	1	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029344	Tpst2	ENSMUST00000031287	ENSMUSP00000031287	TRANSLATION	protein_coding	-	-	1	376	11	4	4.8	200	0	1,-3	-	-	19	ALTERNATIVE:1
ENSMUSG00000029344	Tpst2	ENSMUST00000134071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029344	Tpst2	ENSMUST00000140262	ENSMUSP00000116816	TRANSLATION	nonsense_mediated_decay	start	-	3	63	2	1	0	42.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001098	Kctd10	ENSMUST00000102581	ENSMUSP00000099641	TRANSLATION	protein_coding	-	CCDS19563.1	1	315	0	2.57	17	74.6	0	-4,-5	-	-	15.67	PRINCIPAL:3
ENSMUSG00000001098	Kctd10	ENSMUST00000001125	ENSMUSP00000001125	TRANSLATION	protein_coding	-	CCDS51623.1	5	316	0	2.72	17	74.6	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000001098	Kctd10	ENSMUST00000134173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001098	Kctd10	ENSMUST00000132646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001098	Kctd10	ENSMUST00000134532	ENSMUSP00000138564	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	1	0	24.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001098	Kctd10	ENSMUST00000135170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001098	Kctd10	ENSMUST00000123538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029406	Pitpnm2	ENSMUST00000086123	ENSMUSP00000083292	TRANSLATION	protein_coding	-	CCDS19674.1	1	1281	7	4.5	1.5	552.6	0	-4,-5	-	-	17.592	PRINCIPAL:3
ENSMUSG00000029406	Pitpnm2	ENSMUST00000159628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029406	Pitpnm2	ENSMUST00000161530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029406	Pitpnm2	ENSMUST00000161273	ENSMUSP00000124292	TRANSLATION	protein_coding	-	-	5	1331	7	4.5	0.5	549.7	0	-4,-5	-	-	17.418	ALTERNATIVE:2
ENSMUSG00000029406	Pitpnm2	ENSMUST00000162812	ENSMUSP00000124740	TRANSLATION	protein_coding	-	CCDS19674.1	1	1281	7	4.5	1.5	552.6	0	-4,-5	-	-	17.592	PRINCIPAL:3
ENSMUSG00000029406	Pitpnm2	ENSMUST00000161644	ENSMUSP00000125073	TRANSLATION	protein_coding	stop	-	5	40	0	1.1	0	61.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029406	Pitpnm2	ENSMUST00000161938	ENSMUSP00000124111	TRANSLATION	protein_coding	-	CCDS71669.1	1	1335	7	4.5	0.5	559.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029406	Pitpnm2	ENSMUST00000161479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029406	Pitpnm2	ENSMUST00000159010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029406	Pitpnm2	ENSMUST00000159677	ENSMUSP00000143269	TRANSLATION	protein_coding	-	-	5	436	0	4.5	0	378.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029188	Slc34a2	ENSMUST00000147243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029188	Slc34a2	ENSMUST00000094787	ENSMUSP00000092380	TRANSLATION	protein_coding	-	CCDS19291.1	1	697	0	0	0.5	133.3	9	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029188	Slc34a2	ENSMUST00000170523	ENSMUSP00000130692	TRANSLATION	protein_coding	stop	-	3	186	0	0	0	53.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000032661	Oas3	ENSMUST00000166703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032661	Oas3	ENSMUST00000165820	ENSMUSP00000125873	TRANSLATION	protein_coding	start	-	3	131	2	2	0	183.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032661	Oas3	ENSMUST00000044833	ENSMUSP00000035588	TRANSLATION	protein_coding	-	CCDS39242.1	1	1138	21	9.6	0.5	831.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032661	Oas3	ENSMUST00000200795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055235	Wdr86	ENSMUST00000127320	ENSMUSP00000119649	TRANSLATION	protein_coding	start/stop	-	5	122	0	2.24	0	26.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055235	Wdr86	ENSMUST00000068693	ENSMUSP00000064785	TRANSLATION	protein_coding	-	CCDS39031.1	2	380	0	5.22	1.7	138.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055235	Wdr86	ENSMUST00000142607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055235	Wdr86	ENSMUST00000196443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039782	Cpeb2	ENSMUST00000198754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039782	Cpeb2	ENSMUST00000166713	ENSMUSP00000130921	TRANSLATION	protein_coding	-	-	5	1022	8	5.89	0.5	189.9	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000039782	Cpeb2	ENSMUST00000200685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039782	Cpeb2	ENSMUST00000169035	ENSMUSP00000125857	TRANSLATION	protein_coding	-	CCDS51487.1	5	992	8	5.89	0.5	189.9	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000039782	Cpeb2	ENSMUST00000114065	ENSMUSP00000109699	TRANSLATION	protein_coding	-	-	5	1014	8	5.89	0.5	189.9	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000039782	Cpeb2	ENSMUST00000114066	ENSMUSP00000109700	TRANSLATION	protein_coding	start/stop	-	5	279	0	3	0	101.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039782	Cpeb2	ENSMUST00000127599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029389	Ddx55	ENSMUST00000136067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029389	Ddx55	ENSMUST00000196021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029389	Ddx55	ENSMUST00000071057	ENSMUSP00000070279	TRANSLATION	protein_coding	-	CCDS39281.1	1	600	13	8.42	7.6	298.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029389	Ddx55	ENSMUST00000131631	ENSMUSP00000143462	TRANSLATION	nonsense_mediated_decay	-	-	1	135	10	1.85	0	47.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029389	Ddx55	ENSMUST00000144433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029389	Ddx55	ENSMUST00000111438	ENSMUSP00000107065	TRANSLATION	protein_coding	-	CCDS57380.1	2	596	13	8.42	3.9	298.3	0	-4,-5	-	-	19.317	MINOR
ENSMUSG00000029389	Ddx55	ENSMUST00000142451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029127	Zbtb49	ENSMUST00000094833	ENSMUSP00000092429	TRANSLATION	protein_coding	-	CCDS19252.1	1	756	28	5.71	0.5	247.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029127	Zbtb49	ENSMUST00000129161	ENSMUSP00000143893	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000126267	ENSMUSP00000122109	TRANSLATION	nonsense_mediated_decay	-	-	1	428	4	2.02	0	117.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000137577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029127	Zbtb49	ENSMUST00000146859	ENSMUSP00000114955	TRANSLATION	protein_coding	start	-	3	121	11	1.83	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000123106	ENSMUSP00000144200	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	1	0	36.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000143436	ENSMUSP00000115513	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	1.9104	0	36.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000136475	ENSMUSP00000117174	TRANSLATION	nonsense_mediated_decay	-	-	5	444	4	2.604	0	117.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000124939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029127	Zbtb49	ENSMUST00000114113	ENSMUSP00000109748	TRANSLATION	protein_coding	-	-	1	480	4	2.02	0	117.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029127	Zbtb49	ENSMUST00000138820	ENSMUSP00000117913	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	1.1	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061601	Pclo	ENSMUST00000182426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061601	Pclo	ENSMUST00000182407	ENSMUSP00000138419	TRANSLATION	protein_coding	-	CCDS59667.1	5	4863	8	8.06	0.5	309.5	0	-4,-5	-	-	11.862	MINOR
ENSMUSG00000061601	Pclo	ENSMUST00000182915	ENSMUSP00000138607	TRANSLATION	protein_coding	start	-	1	1592	8	8.06	0	113.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061601	Pclo	ENSMUST00000030691	ENSMUSP00000030691	TRANSLATION	protein_coding	-	CCDS51415.1	5	5068	8	9.78	0.5	354.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062960	Kdr	ENSMUST00000149573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062960	Kdr	ENSMUST00000113516	ENSMUSP00000109144	TRANSLATION	protein_coding	-	CCDS39114.1	1	1345	19	24.98	1.5	508	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000062960	Kdr	ENSMUST00000202473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029004	Kmt2e	ENSMUST00000126586	ENSMUSP00000141126	TRANSLATION	nonsense_mediated_decay	start	-	5	245	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029004	Kmt2e	ENSMUST00000200330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029004	Kmt2e	ENSMUST00000115128	ENSMUSP00000110781	TRANSLATION	protein_coding	-	CCDS51430.1	5	1868	15	5.7	0.5	77.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029004	Kmt2e	ENSMUST00000094962	ENSMUSP00000092569	TRANSLATION	protein_coding	-	CCDS51430.1	5	1868	15	5.7	0.5	77.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029004	Kmt2e	ENSMUST00000194010	ENSMUSP00000141393	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029004	Kmt2e	ENSMUST00000196889	ENSMUSP00000142568	TRANSLATION	nonsense_mediated_decay	-	-	1	377	10	3.7	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029004	Kmt2e	ENSMUST00000146375	ENSMUSP00000142547	TRANSLATION	nonsense_mediated_decay	start	-	1	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029004	Kmt2e	ENSMUST00000196260	ENSMUSP00000143791	TRANSLATION	protein_coding	start/stop	-	5	244	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029004	Kmt2e	ENSMUST00000197591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029311	Hsd17b11	ENSMUST00000031251	ENSMUSP00000031251	TRANSLATION	protein_coding	-	CCDS19481.1	1	298	27	6.15	3.9	170.3	0	0,-4	-	-	18.94	PRINCIPAL:1
ENSMUSG00000029311	Hsd17b11	ENSMUST00000119025	ENSMUSP00000113455	TRANSLATION	protein_coding	-	-	1	232	27	5	0	171.3	0	0,-4	-	-	15.702	MINOR
ENSMUSG00000053388	Trim50	ENSMUST00000065785	ENSMUSP00000066662	TRANSLATION	protein_coding	-	CCDS19739.1	1	483	16	1.8	2.7	175.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000053388	Trim50	ENSMUST00000111180	ENSMUSP00000106811	TRANSLATION	protein_coding	-	-	1	484	16	1.8	2.7	175.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000100704	Gm28434	ENSMUST00000187738	ENSMUSP00000139916	TRANSLATION	protein_coding,RT	-	-	5	46	0	0	0	0	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000093445	Lrch4	ENSMUST00000177477	ENSMUSP00000135724	TRANSLATION	nonsense_mediated_decay	-	-	3	99	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093445	Lrch4	ENSMUST00000176667	ENSMUSP00000135832	TRANSLATION	protein_coding	-	CCDS57392.1	1	649	0	6.59	0.5	120.2	0	-4,-5	-	-	11.742	ALTERNATIVE:2
ENSMUSG00000093445	Lrch4	ENSMUST00000176011	ENSMUSP00000135133	TRANSLATION	nonsense_mediated_decay	-	-	3	139	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093445	Lrch4	ENSMUST00000176988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093445	Lrch4	ENSMUST00000176871	ENSMUSP00000135638	TRANSLATION	protein_coding	start/stop	-	1	79	0	0.15	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000093445	Lrch4	ENSMUST00000176768	ENSMUSP00000135242	TRANSLATION	protein_coding	start	-	3	145	0	1.24	0	43.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093445	Lrch4	ENSMUST00000031734	ENSMUSP00000031734	TRANSLATION	protein_coding	-	CCDS19772.1	1	680	0	6.47	0.5	124.5	1	-4,-5	-	-	11.76	PRINCIPAL:3
ENSMUSG00000093445	Lrch4	ENSMUST00000175968	ENSMUSP00000134767	TRANSLATION	protein_coding	-	-	5	626	0	6.5	0	124.5	1	-4,-7	-	-	11.82	ALTERNATIVE:2
ENSMUSG00000029557	Mrm2	ENSMUST00000031536	ENSMUSP00000031536	TRANSLATION	protein_coding	-	CCDS39355.1	1	246	20	2	3.9	174.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000029199	Lias	ENSMUST00000139847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029199	Lias	ENSMUST00000126036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029199	Lias	ENSMUST00000200374	ENSMUSP00000143152	TRANSLATION	protein_coding	stop	-	3	74	0	1.625	0	46.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029199	Lias	ENSMUST00000122026	ENSMUSP00000113228	TRANSLATION	protein_coding	-	CCDS19307.1	1	373	0	7.125	6.3	218.2	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000029199	Lias	ENSMUST00000031101	ENSMUSP00000031101	TRANSLATION	protein_coding	-	CCDS80288.1	1	289	0	6.625	0.5	105.4	0	-4,-6	-	-	4.998	MINOR
ENSMUSG00000029199	Lias	ENSMUST00000127519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045314	Sowahb	ENSMUST00000061328	ENSMUSP00000055267	TRANSLATION	protein_coding	-	CCDS19435.1	-	760	0	0	0.5	35.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000201371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060261	Gtf2i	ENSMUST00000173888	ENSMUSP00000133969	TRANSLATION	protein_coding	-	-	5	939	0	15.32	1	620.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000172904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060261	Gtf2i	ENSMUST00000174003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000172953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060261	Gtf2i	ENSMUST00000174133	ENSMUSP00000134111	TRANSLATION	protein_coding	start/stop	-	5	437	0	7.49	0	292.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174772	ENSMUSP00000133740	TRANSLATION	protein_coding	-	CCDS39300.1	2	977	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000173887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060261	Gtf2i	ENSMUST00000173504	ENSMUSP00000134042	TRANSLATION	protein_coding	stop	-	5	150	0	1.75	0	47.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000173485	ENSMUSP00000133526	TRANSLATION	protein_coding	start	-	3	167	0	2.18	0	88.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000111261	ENSMUSP00000106892	TRANSLATION	protein_coding	-	CCDS39299.1	5	979	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000173509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000082057	ENSMUSP00000080714	TRANSLATION	protein_coding	-	CCDS39300.1	5	977	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000172600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000174513	ENSMUSP00000133489	TRANSLATION	protein_coding	-	CCDS57386.1	2	958	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000173341	ENSMUSP00000133444	TRANSLATION	protein_coding	-	CCDS57387.1	1	962	0	15.32	0.5	620.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000059042	ENSMUSP00000049625	TRANSLATION	protein_coding	-	CCDS39301.1	1	998	0	15.32	6.3	620.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000060261	Gtf2i	ENSMUST00000202343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000172553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060261	Gtf2i	ENSMUST00000173263	ENSMUSP00000133905	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000173651	ENSMUSP00000133375	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174188	ENSMUSP00000134636	TRANSLATION	protein_coding	stop	-	3	159	0	2.08	0	67.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174354	ENSMUSP00000134440	TRANSLATION	protein_coding	-	CCDS39299.1	2	979	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000174867	ENSMUSP00000133435	TRANSLATION	protein_coding	stop	-	3	169	0	2.41	0	84.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060261	Gtf2i	ENSMUST00000174155	ENSMUSP00000133566	TRANSLATION	protein_coding	-	CCDS39301.1	2	998	0	15.32	6.3	620.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000060261	Gtf2i	ENSMUST00000172715	ENSMUSP00000134035	TRANSLATION	protein_coding	-	-	5	913	0	15.32	1	620.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000056966	Gjc3	ENSMUST00000199083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056966	Gjc3	ENSMUST00000077119	ENSMUSP00000076367	TRANSLATION	protein_coding	-	CCDS19782.1	1	269	0	0.42	0.5	204	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029458	Brap	ENSMUST00000196897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029458	Brap	ENSMUST00000127703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029458	Brap	ENSMUST00000111765	ENSMUSP00000107395	TRANSLATION	protein_coding	-	CCDS80389.1	1	561	11	2.13	1.7	228.8	0	-4,-5	-	-	18.318	MINOR
ENSMUSG00000029458	Brap	ENSMUST00000142701	ENSMUSP00000143043	TRANSLATION	protein_coding	start	-	1	199	0	0	0	71.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029458	Brap	ENSMUST00000148052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029458	Brap	ENSMUST00000132491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029458	Brap	ENSMUST00000195952	ENSMUSP00000143350	TRANSLATION	nonsense_mediated_decay	start	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029458	Brap	ENSMUST00000140996	ENSMUSP00000122536	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029458	Brap	ENSMUST00000031414	ENSMUSP00000031414	TRANSLATION	protein_coding	-	CCDS19640.1	1	591	11	2.13	7.6	228.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000038319	Kcnh2	ENSMUST00000115098	ENSMUSP00000110750	TRANSLATION	protein_coding	-	CCDS80224.1	1	820	0	5.32	3.9	166.9	3	-4,-7	-	-	4.378	MINOR
ENSMUSG00000038319	Kcnh2	ENSMUST00000142197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038319	Kcnh2	ENSMUST00000126791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038319	Kcnh2	ENSMUST00000129246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038319	Kcnh2	ENSMUST00000036092	ENSMUSP00000047705	TRANSLATION	protein_coding	-	CCDS19116.1	1	1162	0	7.75	1.5	229.6	3	-4,-2	-	-	12.172	PRINCIPAL:1
ENSMUSG00000035310	Lin54	ENSMUST00000137750	ENSMUSP00000120644	TRANSLATION	protein_coding	-	CCDS84919.1	5	528	18	3.75	7.5	90.2	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000035310	Lin54	ENSMUST00000123572	ENSMUSP00000123425	TRANSLATION	protein_coding	-	CCDS19462.2	1	749	18	3.75	7.5	90.2	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000035310	Lin54	ENSMUST00000134439	ENSMUSP00000118673	TRANSLATION	nonsense_mediated_decay	start	-	1	146	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035310	Lin54	ENSMUST00000154921	ENSMUSP00000121137	TRANSLATION	protein_coding	-	CCDS84919.1	5	528	18	3.75	7.5	90.2	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000035310	Lin54	ENSMUST00000046154	ENSMUSP00000041374	TRANSLATION	protein_coding	-	CCDS19462.2	1	749	18	3.75	7.5	90.2	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000035310	Lin54	ENSMUST00000144030	ENSMUSP00000120010	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035310	Lin54	ENSMUST00000152387	ENSMUSP00000121902	TRANSLATION	protein_coding	-	-	5	660	18	3.75	3.6	90.2	0	-4,-5	-	-	19.2	MINOR
ENSMUSG00000035310	Lin54	ENSMUST00000144716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035310	Lin54	ENSMUST00000149714	ENSMUSP00000123544	TRANSLATION	protein_coding	-	CCDS84919.1	5	528	18	3.75	7.5	90.2	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000035310	Lin54	ENSMUST00000139234	ENSMUSP00000119322	TRANSLATION	nonsense_mediated_decay	-	-	5	243	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070498	Tmem132b	ENSMUST00000031446	ENSMUSP00000031446	TRANSLATION	protein_coding	-	CCDS57384.1	5	1078	0	0	0.5	763.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000070498	Tmem132b	ENSMUST00000184422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070498	Tmem132b	ENSMUST00000185104	ENSMUSP00000139013	TRANSLATION	protein_coding	stop	-	3	168	1	0	0	103.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000028999	Rint1	ENSMUST00000124680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028999	Rint1	ENSMUST00000144709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028999	Rint1	ENSMUST00000132260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028999	Rint1	ENSMUST00000112256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028999	Rint1	ENSMUST00000117783	ENSMUSP00000112763	TRANSLATION	protein_coding	-	-	1	60	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000028999	Rint1	ENSMUST00000030852	ENSMUSP00000030852	TRANSLATION	protein_coding	-	CCDS39025.1	1	792	0	0	1.5	446.5	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000028999	Rint1	ENSMUST00000115113	ENSMUSP00000110766	TRANSLATION	protein_coding	-	CCDS80220.1	1	734	0	0	0.5	446.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000028999	Rint1	ENSMUST00000196607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028999	Rint1	ENSMUST00000120869	ENSMUSP00000112671	TRANSLATION	protein_coding	-	-	1	36	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000096044	Gm16427	ENSMUST00000201432	ENSMUSP00000144252	TRANSLATION	protein_coding	-	-	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000096044	Gm16427	ENSMUST00000179091	ENSMUSP00000136600	TRANSLATION	protein_coding	start/stop	-	5	483	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096044	Gm16427	ENSMUST00000200745	ENSMUSP00000143929	TRANSLATION	protein_coding	-	-	2	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000043614	Vps37d	ENSMUST00000067935	ENSMUSP00000063762	TRANSLATION	protein_coding	-	CCDS57388.1	1	261	0	0	1.5	110.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000043614	Vps37d	ENSMUST00000076203	ENSMUSP00000075559	TRANSLATION	protein_coding	-	CCDS19733.1	1	176	0	0	0.5	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000029254	Stap1	ENSMUST00000151556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029254	Stap1	ENSMUST00000123393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029254	Stap1	ENSMUST00000132546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029254	Stap1	ENSMUST00000031171	ENSMUSP00000031171	TRANSLATION	protein_coding	-	CCDS80312.1	1	259	0	6.3	1.5	0	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000029254	Stap1	ENSMUST00000198435	ENSMUSP00000143251	TRANSLATION	protein_coding	-	CCDS19377.1	1	297	0	7.3	1.5	30.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029254	Stap1	ENSMUST00000138076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049327	Kmt5a	ENSMUST00000138766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049327	Kmt5a	ENSMUST00000147692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049327	Kmt5a	ENSMUST00000196860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049327	Kmt5a	ENSMUST00000100709	ENSMUSP00000098275	TRANSLATION	protein_coding	-	CCDS80410.1	1	364	13	4.1	1.5	67	0	-4,-2	-	-	18.231	MINOR
ENSMUSG00000049327	Kmt5a	ENSMUST00000059580	ENSMUSP00000052953	TRANSLATION	protein_coding	-	CCDS19675.1	1	350	13	4.1	6.3	67	0	-4,-1	-	-	20.445	PRINCIPAL:3
ENSMUSG00000049327	Kmt5a	ENSMUST00000134826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049327	Kmt5a	ENSMUST00000198451	ENSMUSP00000143207	TRANSLATION	protein_coding	-	CCDS80411.1	3	295	13	4.1	7.5	67	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000049327	Kmt5a	ENSMUST00000154031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049327	Kmt5a	ENSMUST00000199798	ENSMUSP00000143765	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049327	Kmt5a	ENSMUST00000125588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049327	Kmt5a	ENSMUST00000143722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049327	Kmt5a	ENSMUST00000147969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049327	Kmt5a	ENSMUST00000135667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054099	Slc25a40	ENSMUST00000196727	ENSMUSP00000142511	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0.5	0	33.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000054099	Slc25a40	ENSMUST00000170496	ENSMUSP00000130630	TRANSLATION	protein_coding	-	CCDS39010.1	1	337	0	3.385	6.5	207.1	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000054099	Slc25a40	ENSMUST00000198792	ENSMUSP00000143045	TRANSLATION	protein_coding	stop	-	2	129	0	1	0	77.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000054099	Slc25a40	ENSMUST00000197006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054099	Slc25a40	ENSMUST00000199817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054099	Slc25a40	ENSMUST00000199532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054099	Slc25a40	ENSMUST00000066921	ENSMUSP00000067611	TRANSLATION	protein_coding	-	CCDS39010.1	1	337	0	3.385	6.5	207.1	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000054099	Slc25a40	ENSMUST00000198119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096527	Gm6370	ENSMUST00000110611	ENSMUSP00000106241	TRANSLATION	protein_coding	-	CCDS85003.1	5	311	0	0	0.5	28.7	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000096527	Gm6370	ENSMUST00000198912	ENSMUSP00000143740	TRANSLATION	protein_coding	-	-	3	315	0	0	0.5	28.7	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000045294	Insig1	ENSMUST00000199728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045294	Insig1	ENSMUST00000059155	ENSMUSP00000061877	TRANSLATION	protein_coding	-	CCDS19142.1	1	259	0	0	1.5	159.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052139	Babam2	ENSMUST00000201592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052139	Babam2	ENSMUST00000114515	ENSMUSP00000110160	TRANSLATION	protein_coding	-	-	5	385	0	0	0	474.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000071531	ENSMUSP00000071462	TRANSLATION	protein_coding	-	CCDS39058.1	1	374	0	0	0.5	433.9	0	-4,-5	-	-	3.546	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000202815	ENSMUSP00000144497	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	53.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000202270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052139	Babam2	ENSMUST00000063813	ENSMUSP00000069133	TRANSLATION	protein_coding	-	CCDS19189.1	1	420	0	0	0.5	433.9	0	-4,-7	-	-	3.546	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000114507	ENSMUSP00000110152	TRANSLATION	protein_coding	-	CCDS51461.1	1	319	0	0	0.5	391.1	0	-4,-5	-	-	0.978	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000201202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052139	Babam2	ENSMUST00000201352	ENSMUSP00000144205	TRANSLATION	protein_coding	-	CCDS19188.1	1	383	0	0	19.5	474.8	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000052139	Babam2	ENSMUST00000131995	ENSMUSP00000128351	TRANSLATION	protein_coding	-	CCDS39059.1	1	245	0	0	0.5	287.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000200705	ENSMUSP00000143964	TRANSLATION	nonsense_mediated_decay	-	-	5	205	0	0	0	231.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000201107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052139	Babam2	ENSMUST00000202080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052139	Babam2	ENSMUST00000202293	ENSMUSP00000144322	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	28.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052139	Babam2	ENSMUST00000202087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052139	Babam2	ENSMUST00000201487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091204	Gm7271	ENSMUST00000191515	ENSMUSP00000147216	TRANSLATION	protein_coding	-	-	5	172	0	0	5.8	76.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000091204	Gm7271	ENSMUST00000172369	ENSMUSP00000146625	TRANSLATION	protein_coding	-	-	1	172	0	0	5.8	76.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060204	Slc10a4l	ENSMUST00000031124	ENSMUSP00000031124	TRANSLATION	protein_coding	-	CCDS39110.1	1	145	0	0	0.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000060204	Slc10a4l	ENSMUST00000239348	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000060204	Slc10a4l	ENSMUST00000239243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044827	Tlr1	ENSMUST00000197886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044827	Tlr1	ENSMUST00000197315	ENSMUSP00000142500	TRANSLATION	protein_coding	-	CCDS19302.1	1	795	0	1	1.5	156.1	1	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044827	Tlr1	ENSMUST00000059349	ENSMUSP00000060793	TRANSLATION	protein_coding	-	CCDS19302.1	1	795	0	1	1.5	156.1	1	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042476	Abcb4	ENSMUST00000199954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042476	Abcb4	ENSMUST00000003717	ENSMUSP00000003717	TRANSLATION	protein_coding	-	CCDS19086.1	1	1276	18	24.04	1.5	815.5	11	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042476	Abcb4	ENSMUST00000197458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042476	Abcb4	ENSMUST00000196067	ENSMUSP00000142425	TRANSLATION	protein_coding	stop	-	1	882	12	16.71	0	596.2	10	-4,-5	-	-	-1	MINOR
ENSMUSG00000042476	Abcb4	ENSMUST00000197150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039860	Srrm3	ENSMUST00000126232	ENSMUSP00000122821	TRANSLATION	protein_coding	stop	-	3	124	0	1.8	0	59.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039860	Srrm3	ENSMUST00000013615	ENSMUSP00000013615	TRANSLATION	nonsense_mediated_decay	-	-	5	342	0	1.8	0.5	59.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039860	Srrm3	ENSMUST00000146038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039860	Srrm3	ENSMUST00000150566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039860	Srrm3	ENSMUST00000144211	ENSMUSP00000115695	TRANSLATION	protein_coding	-	CCDS39319.2	1	648	0	1.8	1.5	144.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039860	Srrm3	ENSMUST00000135615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033805	Ephx4	ENSMUST00000159968	ENSMUSP00000125261	TRANSLATION	protein_coding	stop	-	3	142	2	3.39	0	78.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033805	Ephx4	ENSMUST00000161246	ENSMUSP00000123962	TRANSLATION	protein_coding	stop	-	3	73	0	1.66	0	52.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033805	Ephx4	ENSMUST00000049146	ENSMUSP00000043764	TRANSLATION	protein_coding	-	CCDS19501.1	2	359	4	5.06	2.7	88.7	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033805	Ephx4	ENSMUST00000161452	ENSMUSP00000124661	TRANSLATION	protein_coding	stop	-	2	93	2	2.16	0	75.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073102	Drc1	ENSMUST00000198023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073102	Drc1	ENSMUST00000101448	ENSMUSP00000098992	TRANSLATION	protein_coding	-	CCDS84857.1	1	753	0	0	1.5	184	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073102	Drc1	ENSMUST00000200399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073102	Drc1	ENSMUST00000200183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014158	Trpv4	ENSMUST00000112217	ENSMUSP00000107836	TRANSLATION	protein_coding	-	-	5	811	8	10.83	2.4	67.9	7	-4,-5	-	-	17.043	MINOR
ENSMUSG00000014158	Trpv4	ENSMUST00000212469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014158	Trpv4	ENSMUST00000133019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014158	Trpv4	ENSMUST00000071968	ENSMUSP00000071859	TRANSLATION	protein_coding	-	CCDS19568.1	1	871	8	11.63	7.5	67.9	7	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000014158	Trpv4	ENSMUST00000112222	ENSMUSP00000107840	TRANSLATION	protein_coding	-	-	5	824	7	10.63	2.4	51.4	7	-4,-5	-	-	14.439	MINOR
ENSMUSG00000014158	Trpv4	ENSMUST00000112219	ENSMUSP00000107838	TRANSLATION	protein_coding	-	-	5	764	7	9.83	2.4	51.4	7	-4,-5	-	-	12.837	MINOR
ENSMUSG00000014158	Trpv4	ENSMUST00000112225	ENSMUSP00000107844	TRANSLATION	protein_coding	-	CCDS19568.1	5	871	8	11.63	7.5	67.9	7	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000014158	Trpv4	ENSMUST00000141828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029385	Ccng2	ENSMUST00000153260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029385	Ccng2	ENSMUST00000152097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029385	Ccng2	ENSMUST00000031331	ENSMUSP00000031331	TRANSLATION	protein_coding	-	CCDS19437.1	1	344	0	2.195	8.8	62.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029385	Ccng2	ENSMUST00000121127	ENSMUSP00000113278	TRANSLATION	protein_coding	-	CCDS19437.1	1	344	0	2.195	8.8	62.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029385	Ccng2	ENSMUST00000130183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029385	Ccng2	ENSMUST00000149329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067848	4933402N22Rik	ENSMUST00000170301	ENSMUSP00000130317	TRANSLATION	protein_coding	-	CCDS51414.1	1	157	0	0	0.5	80.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000067848	4933402N22Rik	ENSMUST00000168329	ENSMUSP00000130833	TRANSLATION	protein_coding	start	-	1	190	0	0	0	80.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029536	Gatc	ENSMUST00000139167	ENSMUSP00000115090	TRANSLATION	protein_coding	-	CCDS19588.1	1	155	0	0.92	1.5	38.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000079215	Zfp664	ENSMUST00000111417	ENSMUSP00000107048	TRANSLATION	protein_coding	-	CCDS39284.1	1	261	36	1	6.3	190.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000079215	Zfp664	ENSMUST00000199154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079215	Zfp664	ENSMUST00000134473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079215	Zfp664	ENSMUST00000141533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079215	Zfp664	ENSMUST00000134463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079215	Zfp664	ENSMUST00000130616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029246	Ppat	ENSMUST00000031158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029246	Ppat	ENSMUST00000140076	ENSMUSP00000120632	TRANSLATION	protein_coding	-	CCDS51527.1	1	517	30	6.785	5.2	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029246	Ppat	ENSMUST00000155272	ENSMUSP00000116438	TRANSLATION	nonsense_mediated_decay	-	-	1	53	1	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029204	Rhoh	ENSMUST00000031106	ENSMUSP00000031106	TRANSLATION	protein_coding	-	CCDS39100.1	1	191	19	0.8	17	151.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000029204	Rhoh	ENSMUST00000201533	ENSMUSP00000143810	TRANSLATION	protein_coding	-	CCDS39100.1	1	191	19	0.8	17	151.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000029204	Rhoh	ENSMUST00000202471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029204	Rhoh	ENSMUST00000202591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029658	Wdr95	ENSMUST00000202635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029658	Wdr95	ENSMUST00000202902	ENSMUSP00000144385	TRANSLATION	protein_coding	-	-	5	784	0	7.905	0	94.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029658	Wdr95	ENSMUST00000110502	ENSMUSP00000106128	TRANSLATION	protein_coding	-	CCDS39409.1	5	642	0	7.638	0.5	75.1	0	-4,0	-	-	10.254	MINOR
ENSMUSG00000029658	Wdr95	ENSMUST00000202257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029658	Wdr95	ENSMUST00000202805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029658	Wdr95	ENSMUST00000201183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029658	Wdr95	ENSMUST00000201525	ENSMUSP00000144234	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	2.948	0	29.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063919	Srrm4	ENSMUST00000150127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063919	Srrm4	ENSMUST00000139425	ENSMUSP00000144367	TRANSLATION	protein_coding	-	-	1	120	0	0	0	61	0	-4,-2	-	-	4.224	MINOR
ENSMUSG00000063919	Srrm4	ENSMUST00000201430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063919	Srrm4	ENSMUST00000076124	ENSMUSP00000075488	TRANSLATION	protein_coding	-	CCDS19601.1	1	608	0	0	0.5	86.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063919	Srrm4	ENSMUST00000222119	ENSMUSP00000152054	TRANSLATION	nonsense_mediated_decay	start	-	5	66	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000130041	ENSMUSP00000118413	TRANSLATION	protein_coding	-	-	1	1035	0	11.82	2.4	1109.1	7	-4,-7	-	-	11.859	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000238265	ENSMUSP00000158605	TRANSLATION	protein_coding	stop	-	-	171	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000239214	ENSMUSP00000159229	TRANSLATION	protein_coding	-	-	-	1111	0	11.32	1.7	1113.9	7	-4,-5	-	-	10.908	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000134303	ENSMUSP00000119976	TRANSLATION	protein_coding	stop	-	5	233	0	2.87	0	109.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000135283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060961	Slc4a4	ENSMUST00000148750	ENSMUSP00000119325	TRANSLATION	protein_coding	-	CCDS19406.1	5	1079	0	11.82	9.8	1109.1	7	-4,-5	-	-	14.382	PRINCIPAL:1
ENSMUSG00000060961	Slc4a4	ENSMUST00000156238	ENSMUSP00000121744	TRANSLATION	protein_coding	-	CCDS51541.1	5	1094	0	11.82	3.9	1109.1	7	-4,-5	-	-	12.372	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000144713	ENSMUSP00000122975	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000113218	ENSMUSP00000108844	TRANSLATION	protein_coding	-	CCDS57352.1	1	1070	0	11.985	2.7	1099.7	7	-4,-5	-	-	11.727	MINOR
ENSMUSG00000060961	Slc4a4	ENSMUST00000113216	ENSMUSP00000108842	TRANSLATION	protein_coding	-	-	1	157	0	1.73	0	63.9	0	-4,-7	-	-	0	MINOR
ENSMUSG00000005057	Sh2b2	ENSMUST00000196447	ENSMUSP00000142728	TRANSLATION	protein_coding	-	CCDS80431.1	1	420	0	3.8	0.5	113.3	0	-4,-7	-	-	5.454	MINOR
ENSMUSG00000005057	Sh2b2	ENSMUST00000196245	ENSMUSP00000142515	TRANSLATION	protein_coding	stop	-	3	44	0	1	0	42.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005057	Sh2b2	ENSMUST00000196397	ENSMUSP00000142398	TRANSLATION	protein_coding	-	CCDS39327.1	1	621	0	5.8	1.5	155.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005057	Sh2b2	ENSMUST00000005188	ENSMUSP00000005188	TRANSLATION	protein_coding	-	CCDS39327.1	1	621	0	5.8	1.5	155.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005057	Sh2b2	ENSMUST00000197324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029657	Hsph1	ENSMUST00000202089	ENSMUSP00000144297	TRANSLATION	protein_coding	-	-	5	817	21	11.588	0	555.2	0	-4,-5	-	-	11.562	MINOR
ENSMUSG00000029657	Hsph1	ENSMUST00000202361	ENSMUSP00000144413	TRANSLATION	protein_coding	-	CCDS19885.1	1	858	21	12.588	6.3	621.9	0	-4,-5	-	-	19.562	PRINCIPAL:3
ENSMUSG00000029657	Hsph1	ENSMUST00000202137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029657	Hsph1	ENSMUST00000200825	ENSMUSP00000143913	TRANSLATION	protein_coding	stop	-	2	100	5	2.498	0	112.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029657	Hsph1	ENSMUST00000200805	ENSMUSP00000143925	TRANSLATION	protein_coding	stop	-	3	94	1	2.528	0	122.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029657	Hsph1	ENSMUST00000201431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029657	Hsph1	ENSMUST00000201666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029657	Hsph1	ENSMUST00000201452	ENSMUSP00000144654	TRANSLATION	protein_coding	-	CCDS19885.1	1	858	21	12.588	6.3	621.9	0	-4,-5	-	-	19.562	PRINCIPAL:3
ENSMUSG00000029657	Hsph1	ENSMUST00000074846	ENSMUSP00000074392	TRANSLATION	protein_coding	-	CCDS85010.1	1	814	21	12.588	5.3	629.2	0	-4,-5	-	-	19.622	ALTERNATIVE:1
ENSMUSG00000029657	Hsph1	ENSMUST00000201559	ENSMUSP00000144043	TRANSLATION	protein_coding	stop	-	5	144	6	4.028	0	185.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029657	Hsph1	ENSMUST00000201877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039737	Prkrip1	ENSMUST00000149151	ENSMUSP00000120639	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039737	Prkrip1	ENSMUST00000123921	ENSMUSP00000117902	TRANSLATION	nonsense_mediated_decay	start	-	3	83	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039737	Prkrip1	ENSMUST00000040980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039737	Prkrip1	ENSMUST00000151786	ENSMUSP00000120659	TRANSLATION	protein_coding	-	CCDS19754.1	1	186	0	0	5.1	162.4	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000050677	Ccdc96	ENSMUST00000060100	ENSMUSP00000059636	TRANSLATION	protein_coding	-	CCDS19239.1	-	584	0	0	0.5	168.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049551	Fzd9	ENSMUST00000062572	ENSMUSP00000053551	TRANSLATION	protein_coding	-	CCDS51661.1	-	592	0	0.32	6.3	551.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000029503	P2rx2	ENSMUST00000195985	ENSMUSP00000143047	TRANSLATION	protein_coding	-	CCDS51607.1	1	485	0	9.33	0.5	490.1	3	-4,0	-	-	11.976	PRINCIPAL:4
ENSMUSG00000029503	P2rx2	ENSMUST00000058016	ENSMUSP00000054233	TRANSLATION	protein_coding	-	CCDS80363.1	1	497	0	9.08	1.5	474.9	2	-4,0	-	-	10.566	MINOR
ENSMUSG00000029503	P2rx2	ENSMUST00000112478	ENSMUSP00000108097	TRANSLATION	protein_coding	-	CCDS51608.1	1	416	0	9.33	1.5	490.5	3	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000029503	P2rx2	ENSMUST00000200214	ENSMUSP00000142567	TRANSLATION	protein_coding	-	CCDS80361.1	1	398	0	7.78	1.5	408.4	2	-4,-5	-	-	3.972	MINOR
ENSMUSG00000029503	P2rx2	ENSMUST00000199165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029503	P2rx2	ENSMUST00000200037	ENSMUSP00000143554	TRANSLATION	protein_coding	-	CCDS80362.1	1	395	0	9.33	0.5	488.3	3	-4,0	-	-	11.868	ALTERNATIVE:2
ENSMUSG00000034110	Kctd7	ENSMUST00000144878	ENSMUSP00000143940	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034110	Kctd7	ENSMUST00000040616	ENSMUSP00000044568	TRANSLATION	protein_coding	-	CCDS19707.1	1	289	0	2	10.4	69.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034110	Kctd7	ENSMUST00000144467	ENSMUSP00000121490	TRANSLATION	protein_coding	start/stop	-	3	232	0	2	0	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025857	Dnaaf5	ENSMUST00000026975	ENSMUSP00000026975	TRANSLATION	protein_coding	-	CCDS39349.1	1	853	0	0	0.5	54	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000025857	Dnaaf5	ENSMUST00000196441	ENSMUSP00000142924	TRANSLATION	protein_coding	-	-	1	558	0	0	0	24	0	-4,-5	-	-	2.664	MINOR
ENSMUSG00000025857	Dnaaf5	ENSMUST00000127542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029675	Eln	ENSMUST00000202570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029675	Eln	ENSMUST00000201856	ENSMUSP00000144555	TRANSLATION	nonsense_mediated_decay	-	-	5	287	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029675	Eln	ENSMUST00000201399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029675	Eln	ENSMUST00000015138	ENSMUSP00000015138	TRANSLATION	protein_coding	-	CCDS19725.1	1	860	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000029675	Eln	ENSMUST00000202620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029501	Ankle2	ENSMUST00000196865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029501	Ankle2	ENSMUST00000197101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029501	Ankle2	ENSMUST00000031474	ENSMUSP00000031474	TRANSLATION	protein_coding	-	CCDS80360.1	1	963	0	0.8	1.5	34.8	1	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000029501	Ankle2	ENSMUST00000086674	ENSMUSP00000083878	TRANSLATION	protein_coding	-	-	5	886	0	0.8	0	34.8	1	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000029501	Ankle2	ENSMUST00000197188	ENSMUSP00000143044	TRANSLATION	protein_coding	-	CCDS57372.1	1	964	0	0.8	1.5	34.8	1	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000029501	Ankle2	ENSMUST00000196821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029370	Rassf6	ENSMUST00000202784	ENSMUSP00000144337	TRANSLATION	protein_coding	-	CCDS80327.1	1	328	0	0	0.5	84.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029370	Rassf6	ENSMUST00000201121	ENSMUSP00000144586	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029370	Rassf6	ENSMUST00000201436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029370	Rassf6	ENSMUST00000202704	ENSMUSP00000144532	TRANSLATION	protein_coding	-	CCDS39142.1	5	341	0	0	1.5	84.2	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000029370	Rassf6	ENSMUST00000201370	ENSMUSP00000144199	TRANSLATION	protein_coding	stop	-	3	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029370	Rassf6	ENSMUST00000031317	ENSMUSP00000031317	TRANSLATION	protein_coding	-	CCDS39142.1	5	341	0	0	1.5	84.2	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000029370	Rassf6	ENSMUST00000202807	ENSMUSP00000144027	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029397	Rchy1	ENSMUST00000200905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029397	Rchy1	ENSMUST00000031345	ENSMUSP00000031345	TRANSLATION	protein_coding	-	CCDS19424.1	1	261	32	7.33	5.1	212.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029397	Rchy1	ENSMUST00000140670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029397	Rchy1	ENSMUST00000138351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029397	Rchy1	ENSMUST00000169948	ENSMUSP00000131270	TRANSLATION	protein_coding	-	CCDS71613.1	3	221	24	6.33	1.7	139.6	0	-4,-5	-	-	6.636	MINOR
ENSMUSG00000096732	Gm8897	ENSMUST00000167041	ENSMUSP00000127509	TRANSLATION	protein_coding	start	-	5	181	0	0	0	78.3	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000096732	Gm8897	ENSMUST00000179679	ENSMUSP00000136745	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	78.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000090981	Olfr718-ps1	ENSMUST00000215102	ENSMUSP00000154150	TRANSLATION	protein_coding	-	-	5	344	0	0.2	1	136.3	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090981	Olfr718-ps1	ENSMUST00000218872	ENSMUSP00000153982	TRANSLATION	protein_coding	start/stop	-	-	321	0	0.2	0	136.3	10	-4,-6	-	-	-1	MINOR
ENSMUSG00000090981	Olfr718-ps1	ENSMUST00000213631	ENSMUSP00000153793	TRANSLATION	protein_coding	-	-	5	344	0	0.2	1	136.3	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090981	Olfr718-ps1	ENSMUST00000164536	ENSMUSP00000154102	TRANSLATION	protein_coding	-	-	5	344	0	0.2	1	136.3	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029659	Medag	ENSMUST00000093110	ENSMUSP00000090798	TRANSLATION	protein_coding	-	CCDS19884.1	1	303	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:2
ENSMUSG00000029659	Medag	ENSMUST00000201083	ENSMUSP00000144535	TRANSLATION	protein_coding	-	-	1	189	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000029659	Medag	ENSMUST00000201588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019518	Ap4m1	ENSMUST00000019662	ENSMUSP00000019662	TRANSLATION	protein_coding	-	CCDS19794.1	1	449	0	11.35	2.7	228.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019518	Ap4m1	ENSMUST00000134100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019518	Ap4m1	ENSMUST00000151318	ENSMUSP00000121338	TRANSLATION	protein_coding	stop	-	5	191	0	3.86	0	23	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019518	Ap4m1	ENSMUST00000157031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019518	Ap4m1	ENSMUST00000142687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019518	Ap4m1	ENSMUST00000155745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019518	Ap4m1	ENSMUST00000143241	ENSMUSP00000123770	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000066854	ENSMUSP00000067205	TRANSLATION	protein_coding	-	CCDS51467.1	2	1366	52	11.33	1.5	300.4	0	-4,-6	-	-	18.172	PRINCIPAL:4
ENSMUSG00000057406	Nsd2	ENSMUST00000114399	ENSMUSP00000110041	TRANSLATION	protein_coding	-	-	5	647	0	1.53	3.9	123.9	0	-4,-6	-	-	1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000201572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057406	Nsd2	ENSMUST00000202912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057406	Nsd2	ENSMUST00000114397	ENSMUSP00000110039	TRANSLATION	protein_coding	-	-	1	629	0	1.53	1.7	123.9	0	-4,-6	-	-	0.241	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000202525	ENSMUSP00000144255	TRANSLATION	nonsense_mediated_decay	start	-	5	272	24	1	0	30.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000075812	ENSMUSP00000075210	TRANSLATION	protein_coding	-	CCDS51467.1	5	1366	52	11.33	1.5	300.4	0	-4,-6	-	-	18.172	PRINCIPAL:4
ENSMUSG00000057406	Nsd2	ENSMUST00000200981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057406	Nsd2	ENSMUST00000141416	ENSMUSP00000117233	TRANSLATION	nonsense_mediated_decay	start	-	1	534	0	1.53	0	123.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000058096	ENSMUSP00000058940	TRANSLATION	protein_coding	-	CCDS51468.1	5	1365	52	11.33	1.5	300.4	0	-4,-6	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000057406	Nsd2	ENSMUST00000137191	ENSMUSP00000122310	TRANSLATION	nonsense_mediated_decay	-	-	5	647	0	1.53	3.9	123.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000142080	ENSMUSP00000115251	TRANSLATION	protein_coding	start	-	3	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000139845	ENSMUSP00000123460	TRANSLATION	nonsense_mediated_decay	-	-	5	647	0	1.53	3.9	123.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057406	Nsd2	ENSMUST00000133870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057406	Nsd2	ENSMUST00000155880	ENSMUSP00000121805	TRANSLATION	protein_coding	stop	-	3	225	0	0.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028970	Abcb1b	ENSMUST00000199955	ENSMUSP00000143766	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	2.45	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000028970	Abcb1b	ENSMUST00000199546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028970	Abcb1b	ENSMUST00000196819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028970	Abcb1b	ENSMUST00000196048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028970	Abcb1b	ENSMUST00000199994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028970	Abcb1b	ENSMUST00000196580	ENSMUSP00000143612	TRANSLATION	nonsense_mediated_decay	-	-	3	106	0	2.45	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000028970	Abcb1b	ENSMUST00000197961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028970	Abcb1b	ENSMUST00000198650	ENSMUSP00000143023	TRANSLATION	protein_coding	start/stop	-	5	205	9	3.33	0	73	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028970	Abcb1b	ENSMUST00000009058	ENSMUSP00000009058	TRANSLATION	protein_coding	-	CCDS19085.1	1	1276	14	25.78	1.5	814	10	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029378	Areg	ENSMUST00000031325	ENSMUSP00000031325	TRANSLATION	protein_coding	-	CCDS19421.1	1	248	0	1.4	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000007080	Pole	ENSMUST00000131887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007080	Pole	ENSMUST00000141506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007080	Pole	ENSMUST00000007296	ENSMUSP00000007296	TRANSLATION	protein_coding	-	CCDS19525.1	1	2283	14	22.18	0.5	868.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000007080	Pole	ENSMUST00000112482	ENSMUSP00000108101	TRANSLATION	protein_coding	-	-	1	193	3	2.1	0	57.1	0	-4,-7	-	-	0	MINOR
ENSMUSG00000007080	Pole	ENSMUST00000152495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007080	Pole	ENSMUST00000112481	ENSMUSP00000108100	TRANSLATION	protein_coding	-	-	1	407	6	0	0	36.6	0	-4,-5	-	-	0.666	MINOR
ENSMUSG00000007080	Pole	ENSMUST00000182442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029528	Pxn	ENSMUST00000137716	ENSMUSP00000144513	TRANSLATION	protein_coding	stop	-	5	121	0	1	0	205.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029528	Pxn	ENSMUST00000212819	ENSMUSP00000148843	TRANSLATION	protein_coding	-	-	5	1062	28	4.35	0	555.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029528	Pxn	ENSMUST00000153682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029528	Pxn	ENSMUST00000139834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029528	Pxn	ENSMUST00000129897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029528	Pxn	ENSMUST00000138139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029528	Pxn	ENSMUST00000125007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029528	Pxn	ENSMUST00000067268	ENSMUSP00000069624	TRANSLATION	protein_coding	-	CCDS19593.1	1	557	28	4.35	0.5	555.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029528	Pxn	ENSMUST00000134198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029528	Pxn	ENSMUST00000202564	ENSMUSP00000144459	TRANSLATION	protein_coding	-	-	5	424	28	4.35	6	447	0	-4,-6	-	-	14	MINOR
ENSMUSG00000029528	Pxn	ENSMUST00000157050	ENSMUSP00000143926	TRANSLATION	protein_coding	stop	-	5	106	0	1	0	182.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029528	Pxn	ENSMUST00000125054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029528	Pxn	ENSMUST00000086523	ENSMUSP00000083709	TRANSLATION	protein_coding	-	CCDS39229.1	2	591	28	4.35	0.5	555.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029528	Pxn	ENSMUST00000152156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029253	Cenpc1	ENSMUST00000199392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029253	Cenpc1	ENSMUST00000199141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029253	Cenpc1	ENSMUST00000031170	ENSMUSP00000031170	TRANSLATION	protein_coding	-	CCDS39123.1	1	906	0	1.93	0.5	552.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029253	Cenpc1	ENSMUST00000198059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057816	Cfap299	ENSMUST00000080333	ENSMUSP00000079208	TRANSLATION	protein_coding	-	CCDS19456.1	1	233	0	0	12	316.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057816	Cfap299	ENSMUST00000197812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057816	Cfap299	ENSMUST00000196339	ENSMUSP00000142864	TRANSLATION	nonsense_mediated_decay	start	-	1	112	0	0	0	110.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057816	Cfap299	ENSMUST00000197724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042985	Upk3b	ENSMUST00000062606	ENSMUSP00000062312	TRANSLATION	protein_coding	-	CCDS19750.1	1	276	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000041870	Ankrd13a	ENSMUST00000200704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041870	Ankrd13a	ENSMUST00000140604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041870	Ankrd13a	ENSMUST00000137519	ENSMUSP00000116994	TRANSLATION	protein_coding	start/stop	-	5	454	0	0.864	0	334.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041870	Ankrd13a	ENSMUST00000102578	ENSMUSP00000099638	TRANSLATION	protein_coding	-	CCDS19572.1	1	588	0	2.504	1.5	371.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041870	Ankrd13a	ENSMUST00000131803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041870	Ankrd13a	ENSMUST00000129001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033294	Noc4l	ENSMUST00000150100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033294	Noc4l	ENSMUST00000199795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033294	Noc4l	ENSMUST00000124612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033294	Noc4l	ENSMUST00000145712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033294	Noc4l	ENSMUST00000123380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033294	Noc4l	ENSMUST00000042147	ENSMUSP00000038263	TRANSLATION	protein_coding	-	CCDS19527.1	1	516	0	0	1.5	136.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029255	Gnrhr	ENSMUST00000094654	ENSMUSP00000092238	TRANSLATION	protein_coding	-	CCDS84897.1	1	264	0	1.32	0.5	93.8	7	-4,-5	-	-	8.676	MINOR
ENSMUSG00000029255	Gnrhr	ENSMUST00000031172	ENSMUSP00000031172	TRANSLATION	protein_coding	-	CCDS19379.1	1	327	0	1.56	7.5	133.8	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029255	Gnrhr	ENSMUST00000113372	ENSMUSP00000108999	TRANSLATION	protein_coding	-	CCDS80313.1	1	177	0	0.48	0.5	67.1	5	-4,-5	-	-	3.846	MINOR
ENSMUSG00000063157	Csn2	ENSMUST00000197687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063157	Csn2	ENSMUST00000199716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063157	Csn2	ENSMUST00000197281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063157	Csn2	ENSMUST00000199624	ENSMUSP00000143409	TRANSLATION	protein_coding	-	CCDS39131.1	5	231	0	0	0.5	71.6	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000063157	Csn2	ENSMUST00000198057	ENSMUSP00000143709	TRANSLATION	protein_coding	-	CCDS80317.1	5	230	0	0	0.5	71.6	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000063157	Csn2	ENSMUST00000082370	ENSMUSP00000080976	TRANSLATION	protein_coding	-	CCDS80317.1	1	230	0	0	0.5	71.6	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000063157	Csn2	ENSMUST00000197422	ENSMUSP00000143341	TRANSLATION	protein_coding	-	CCDS39131.1	1	231	0	0	0.5	71.6	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000063157	Csn2	ENSMUST00000196664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063157	Csn2	ENSMUST00000200627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063157	Csn2	ENSMUST00000196869	ENSMUSP00000142971	TRANSLATION	protein_coding	-	CCDS80315.1	5	215	0	0	0.5	71.6	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000063157	Csn2	ENSMUST00000196163	ENSMUSP00000142673	TRANSLATION	protein_coding	-	-	5	223	0	0	0.5	71.6	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000028883	Sema3a	ENSMUST00000125629	ENSMUSP00000121710	TRANSLATION	protein_coding	stop	-	2	72	0	2.08	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028883	Sema3a	ENSMUST00000030714	ENSMUSP00000030714	TRANSLATION	protein_coding	-	CCDS19092.1	1	772	0	15.01	12.8	529.4	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000028883	Sema3a	ENSMUST00000196514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028883	Sema3a	ENSMUST00000195907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028883	Sema3a	ENSMUST00000200073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028883	Sema3a	ENSMUST00000141968	ENSMUSP00000122621	TRANSLATION	protein_coding	stop	-	3	62	0	1.75	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028883	Sema3a	ENSMUST00000137798	ENSMUSP00000128153	TRANSLATION	protein_coding	stop	-	1	688	0	15.01	0	529.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000028883	Sema3a	ENSMUST00000095012	ENSMUSP00000092621	TRANSLATION	protein_coding	-	CCDS19092.1	1	772	0	15.01	12.8	529.4	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000028883	Sema3a	ENSMUST00000197582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040514	Tex47	ENSMUST00000196680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040514	Tex47	ENSMUST00000160634	ENSMUSP00000125471	TRANSLATION	protein_coding	-	CCDS19078.1	1	253	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000040514	Tex47	ENSMUST00000159546	ENSMUSP00000124368	TRANSLATION	protein_coding	-	CCDS19078.1	1	253	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000040514	Tex47	ENSMUST00000088796	ENSMUSP00000086176	TRANSLATION	protein_coding	-	CCDS19078.1	1	253	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000042328	Hps4	ENSMUST00000112359	ENSMUSP00000107978	TRANSLATION	protein_coding	-	CCDS19540.1	5	671	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000042328	Hps4	ENSMUST00000175718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042328	Hps4	ENSMUST00000035279	ENSMUSP00000047920	TRANSLATION	protein_coding	-	CCDS19540.1	1	671	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000042328	Hps4	ENSMUST00000176737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042328	Hps4	ENSMUST00000129839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042328	Hps4	ENSMUST00000177121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042328	Hps4	ENSMUST00000133708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051674	Dcun1d4	ENSMUST00000134092	ENSMUSP00000118710	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000145645	ENSMUSP00000122689	TRANSLATION	protein_coding	stop	-	5	101	0	1.714	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000133137	ENSMUSP00000120055	TRANSLATION	nonsense_mediated_decay	-	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000087181	ENSMUSP00000084427	TRANSLATION	protein_coding	-	CCDS57349.1	1	306	0	5.014	2.7	107.2	0	-4,-5	-	-	12.48	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000063882	ENSMUSP00000067616	TRANSLATION	protein_coding	-	CCDS19342.1	1	292	0	5.014	11.6	107.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051674	Dcun1d4	ENSMUST00000113558	ENSMUSP00000109187	TRANSLATION	protein_coding	-	CCDS57350.1	1	257	0	4.214	4.1	53.2	0	-4,-5	-	-	8.034	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000141553	ENSMUSP00000114637	TRANSLATION	protein_coding	stop	-	5	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000149970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051674	Dcun1d4	ENSMUST00000156806	ENSMUSP00000116294	TRANSLATION	protein_coding	stop	-	3	46	0	0.1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051674	Dcun1d4	ENSMUST00000130087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051674	Dcun1d4	ENSMUST00000136268	ENSMUSP00000119983	TRANSLATION	protein_coding	stop	-	3	106	0	1.714	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002221	Paxip1	ENSMUST00000199714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002221	Paxip1	ENSMUST00000197625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002221	Paxip1	ENSMUST00000196641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002221	Paxip1	ENSMUST00000199993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002221	Paxip1	ENSMUST00000196605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002221	Paxip1	ENSMUST00000002291	ENSMUSP00000002291	TRANSLATION	protein_coding	-	CCDS39039.1	1	1056	0	8.74	0.5	255.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002221	Paxip1	ENSMUST00000196734	ENSMUSP00000142578	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040351	Ankib1	ENSMUST00000043551	ENSMUSP00000040946	TRANSLATION	protein_coding	-	CCDS51408.1	1	1085	20	7.045	6.3	128	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040351	Ankib1	ENSMUST00000200335	ENSMUSP00000142687	TRANSLATION	protein_coding	stop	-	1	809	20	7.045	0	128	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040351	Ankib1	ENSMUST00000200052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040351	Ankib1	ENSMUST00000198344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040351	Ankib1	ENSMUST00000199763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040351	Ankib1	ENSMUST00000199043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036565	Ttyh3	ENSMUST00000197452	ENSMUSP00000142655	TRANSLATION	protein_coding	-	CCDS80450.1	1	479	0	0	0.5	599.1	4	-4,-7	-	-	6	MINOR
ENSMUSG00000036565	Ttyh3	ENSMUST00000198704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036565	Ttyh3	ENSMUST00000198765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036565	Ttyh3	ENSMUST00000199157	ENSMUSP00000143587	TRANSLATION	protein_coding	start	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036565	Ttyh3	ENSMUST00000200302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036565	Ttyh3	ENSMUST00000042661	ENSMUSP00000037447	TRANSLATION	protein_coding	-	CCDS19822.1	1	524	0	0	6.3	599.1	4	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000029280	Smr3a	ENSMUST00000031211	ENSMUSP00000031211	TRANSLATION	protein_coding	-	CCDS19398.1	1	147	0	0	0.5	86.8	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029280	Smr3a	ENSMUST00000189633	ENSMUSP00000139852	TRANSLATION	protein_coding	-	-	5	64	0	0	0	76.9	0	1,-2	-	-	5.316	MINOR
ENSMUSG00000067438	Hmx1	ENSMUST00000172923	ENSMUSP00000139840	TRANSLATION	protein_coding	stop	-	3	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067438	Hmx1	ENSMUST00000087674	ENSMUSP00000084958	TRANSLATION	protein_coding	-	CCDS19228.1	1	332	0	0.4	0.5	71.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029176	Anapc4	ENSMUST00000198207	ENSMUSP00000143055	TRANSLATION	protein_coding	start/stop	-	5	171	0	5	0	95.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029176	Anapc4	ENSMUST00000130536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000150682	ENSMUSP00000143745	TRANSLATION	protein_coding	start/stop	-	5	151	0	4.5	0	58.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029176	Anapc4	ENSMUST00000199850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000141641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000131750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000138629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000144574	ENSMUSP00000114475	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	2	0	61.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029176	Anapc4	ENSMUST00000154980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000031072	ENSMUSP00000031072	TRANSLATION	protein_coding	-	CCDS19290.1	1	807	0	21.33	6.3	285.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000029176	Anapc4	ENSMUST00000142035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029176	Anapc4	ENSMUST00000145349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041468	Gpr12	ENSMUST00000197431	ENSMUSP00000142889	TRANSLATION	protein_coding	-	CCDS19871.1	1	334	0	2.078	10.4	104.2	9	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041468	Gpr12	ENSMUST00000197825	ENSMUSP00000143415	TRANSLATION	protein_coding	stop	-	3	152	0	0.6	0	54.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000041468	Gpr12	ENSMUST00000036211	ENSMUSP00000038245	TRANSLATION	protein_coding	-	CCDS19871.1	1	334	0	2.078	10.4	104.2	9	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041468	Gpr12	ENSMUST00000196096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041468	Gpr12	ENSMUST00000200112	ENSMUSP00000143653	TRANSLATION	protein_coding	stop	-	2	54	0	0.8	0	0	1	3,-2	-	-	-1	MINOR
ENSMUSG00000016520	Lnx2	ENSMUST00000016664	ENSMUSP00000016664	TRANSLATION	protein_coding	-	CCDS19875.1	1	687	11	7.2	5.2	243.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000016520	Lnx2	ENSMUST00000123092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034324	Tmem132c	ENSMUST00000134780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034324	Tmem132c	ENSMUST00000132592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034324	Tmem132c	ENSMUST00000145748	ENSMUSP00000121783	TRANSLATION	protein_coding	start	-	3	148	0	0	0	98.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034324	Tmem132c	ENSMUST00000128068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034324	Tmem132c	ENSMUST00000119026	ENSMUSP00000113090	TRANSLATION	protein_coding	-	CCDS51650.1	1	1107	0	0	1.5	774.2	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000079562	Maea	ENSMUST00000202839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079562	Maea	ENSMUST00000202113	ENSMUSP00000144238	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079562	Maea	ENSMUST00000200882	ENSMUSP00000144587	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079562	Maea	ENSMUST00000200716	ENSMUSP00000144584	TRANSLATION	protein_coding	stop	-	5	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079562	Maea	ENSMUST00000202941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079562	Maea	ENSMUST00000114449	ENSMUSP00000110093	TRANSLATION	protein_coding	-	CCDS39063.1	1	396	2	0	18.3	106.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036718	Micall2	ENSMUST00000164584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036718	Micall2	ENSMUST00000170773	ENSMUSP00000127937	TRANSLATION	protein_coding	-	-	1	926	9	5.35	0.5	165.6	0	-4,-5	-	-	8.808	MINOR
ENSMUSG00000036718	Micall2	ENSMUST00000044642	ENSMUSP00000039707	TRANSLATION	protein_coding	-	CCDS39353.2	1	1009	9	7.35	0.5	252.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036718	Micall2	ENSMUST00000165645	ENSMUSP00000132479	TRANSLATION	nonsense_mediated_decay	start	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039358	Drd5	ENSMUST00000041646	ENSMUSP00000039691	TRANSLATION	protein_coding	-	CCDS19255.1	-	478	0	0.42	1.5	246.2	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000118332	Fam220a	ENSMUST00000118121	ENSMUSP00000112767	TRANSLATION	protein_coding	-	-	1	68	0	0	3.7	130.5	0	-2,2	-	-	1	MINOR
ENSMUSG00000118332	Fam220a	ENSMUST00000101434	ENSMUSP00000117552	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	3.7	130.5	0	-2,2	-	-	-1	MINOR
ENSMUSG00000118332	Fam220a	ENSMUST00000067145	ENSMUSP00000063424	TRANSLATION	protein_coding	-	CCDS51690.1	1	260	0	0	0.5	242.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000118332	Fam220a	ENSMUST00000119488	ENSMUSP00000114024	TRANSLATION	protein_coding	-	-	1	68	0	0	3.7	135.6	0	-2,2	-	-	1	MINOR
ENSMUSG00000118332	Fam220a	ENSMUST00000169329	ENSMUSP00000126480	TRANSLATION	protein_coding	-	CCDS51690.1	1	260	0	0	0.5	242.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096664	Gm3409	ENSMUST00000199142	ENSMUSP00000142652	TRANSLATION	protein_coding	-	-	5	319	0	0	0.5	28.8	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000096664	Gm3409	ENSMUST00000110599	ENSMUSP00000106229	TRANSLATION	protein_coding	-	CCDS85006.1	5	315	0	0	0.5	28.8	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000096664	Gm3409	ENSMUST00000110597	ENSMUSP00000106227	TRANSLATION	protein_coding	-	-	5	307	0	0	0.5	28.8	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000093910	Zfp853	ENSMUST00000212355	ENSMUSP00000148683	TRANSLATION	protein_coding	-	-	5	733	19	0.4	0.5	118.4	0	-4,-5	-	-	18	PRINCIPAL:5
ENSMUSG00000093910	Zfp853	ENSMUST00000212715	ENSMUSP00000148846	TRANSLATION	protein_coding	-	-	5	718	19	0.4	0	118.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000093910	Zfp853	ENSMUST00000180336	ENSMUSP00000137494	TRANSLATION	protein_coding	start/stop	-	5	652	19	0.4	0	118.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038690	Atp5j2	ENSMUST00000200584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038690	Atp5j2	ENSMUST00000162360	ENSMUSP00000138039	TRANSLATION	nonsense_mediated_decay	-	-	2	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038690	Atp5j2	ENSMUST00000161741	ENSMUSP00000125504	TRANSLATION	protein_coding	-	CCDS39385.1	1	88	0	0	8.8	68.4	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000038690	Atp5j2	ENSMUST00000161845	ENSMUSP00000123904	TRANSLATION	protein_coding	start	-	5	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038690	Atp5j2	ENSMUST00000037056	ENSMUSP00000039726	TRANSLATION	protein_coding	-	-	5	76	0	0	4.2	63.2	1	-4,-5	-	-	6.774	MINOR
ENSMUSG00000073497	AA792892	ENSMUST00000202253	ENSMUSP00000143886	TRANSLATION	protein_coding	-	CCDS39165.1	1	278	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000073497	AA792892	ENSMUST00000097477	ENSMUSP00000095085	TRANSLATION	protein_coding	-	CCDS39165.1	1	278	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000029211	Gabra4	ENSMUST00000199150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029211	Gabra4	ENSMUST00000198138	ENSMUSP00000142466	TRANSLATION	protein_coding	-	-	2	94	0	1.35	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000029211	Gabra4	ENSMUST00000031121	ENSMUSP00000031121	TRANSLATION	protein_coding	-	CCDS39107.1	1	552	5	6.335	1.5	315.5	2	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000029211	Gabra4	ENSMUST00000197994	ENSMUSP00000143063	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029211	Gabra4	ENSMUST00000199357	ENSMUSP00000143675	TRANSLATION	protein_coding	-	-	1	578	5	6.335	1	294.5	2	0,-3	-	-	15.74	MINOR
ENSMUSG00000028926	Cdk14	ENSMUST00000133465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028926	Cdk14	ENSMUST00000199623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028926	Cdk14	ENSMUST00000115450	ENSMUSP00000111110	TRANSLATION	protein_coding	-	CCDS80203.1	1	423	21	8.27	14	229.4	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000028926	Cdk14	ENSMUST00000200637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028926	Cdk14	ENSMUST00000030763	ENSMUSP00000030763	TRANSLATION	protein_coding	-	CCDS19073.1	1	469	21	8.27	12.5	229.4	0	-4,-5	-	-	21.54	PRINCIPAL:3
ENSMUSG00000028926	Cdk14	ENSMUST00000134867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028926	Cdk14	ENSMUST00000171119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028926	Cdk14	ENSMUST00000131392	ENSMUSP00000114741	TRANSLATION	protein_coding	stop	-	5	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028926	Cdk14	ENSMUST00000153331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028926	Cdk14	ENSMUST00000132390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028926	Cdk14	ENSMUST00000137554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028926	Cdk14	ENSMUST00000167567	ENSMUSP00000130895	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000028926	Cdk14	ENSMUST00000115452	ENSMUSP00000111112	TRANSLATION	protein_coding	-	-	5	451	21	8.27	2.4	229.4	0	-4,-7	-	-	18.432	MINOR
ENSMUSG00000028926	Cdk14	ENSMUST00000115451	ENSMUSP00000111111	TRANSLATION	protein_coding	-	CCDS80203.1	1	423	21	8.27	14	229.4	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000028926	Cdk14	ENSMUST00000156660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061118	Dnajc30	ENSMUST00000071263	ENSMUSP00000094318	TRANSLATION	protein_coding	-	CCDS39315.1	-	219	0	0.8	1.5	69.2	0	1,3	-	-	12	PRINCIPAL:1
ENSMUSG00000091897	Gm17019	ENSMUST00000167908	ENSMUSP00000127520	TRANSLATION	protein_coding	-	CCDS51419.1	1	255	0	0	0.5	99.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039883	Lrrc17	ENSMUST00000199277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039883	Lrrc17	ENSMUST00000035651	ENSMUSP00000038569	TRANSLATION	protein_coding	-	CCDS51428.1	1	443	0	2.2	0.5	91.1	0	4,2	-	-	12	PRINCIPAL:1
ENSMUSG00000039095	En2	ENSMUST00000036177	ENSMUSP00000036761	TRANSLATION	protein_coding	-	CCDS19143.1	1	324	0	1	0.5	137.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048142	Nat8l	ENSMUST00000056355	ENSMUSP00000059313	TRANSLATION	protein_coding	-	CCDS19210.1	1	299	22	0.8	1.5	50.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048142	Nat8l	ENSMUST00000201041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048578	Mlec	ENSMUST00000124678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048578	Mlec	ENSMUST00000112121	ENSMUSP00000107749	TRANSLATION	protein_coding	-	CCDS19581.1	1	291	5	3.95	1.5	153.3	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000072774	Zfp951	ENSMUST00000089906	ENSMUSP00000087350	TRANSLATION	protein_coding	-	-	5	451	40	2.05	0.5	206.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000072774	Zfp951	ENSMUST00000186219	ENSMUSP00000140625	TRANSLATION	protein_coding	-	CCDS80351.1	5	451	40	2.05	0.5	206.1	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000072774	Zfp951	ENSMUST00000191135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043036	Ccdc63	ENSMUST00000196608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043036	Ccdc63	ENSMUST00000132701	ENSMUSP00000114311	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000043036	Ccdc63	ENSMUST00000128101	ENSMUSP00000114804	TRANSLATION	protein_coding	stop	-	5	127	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043036	Ccdc63	ENSMUST00000146235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043036	Ccdc63	ENSMUST00000058960	ENSMUSP00000050582	TRANSLATION	protein_coding	-	CCDS39253.1	1	582	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043036	Ccdc63	ENSMUST00000198618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043036	Ccdc63	ENSMUST00000152389	ENSMUSP00000114143	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060708	Bloc1s4	ENSMUST00000071949	ENSMUSP00000071840	TRANSLATION	protein_coding	-	CCDS19241.1	-	215	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000048988	Elfn1	ENSMUST00000050519	ENSMUSP00000053869	TRANSLATION	protein_coding	-	CCDS19816.1	1	828	0	0	1.5	52.5	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048988	Elfn1	ENSMUST00000198608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029111	Nelfa	ENSMUST00000030993	ENSMUSP00000030993	TRANSLATION	protein_coding	-	CCDS19208.1	1	530	0	3	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029111	Nelfa	ENSMUST00000132942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107180	Gm43638	ENSMUST00000201519	ENSMUSP00000143986	TRANSLATION	protein_coding,RT	-	-	5	694	13	2.4	0	574.1	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000037685	Atp8a1	ENSMUST00000149501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037685	Atp8a1	ENSMUST00000037380	ENSMUSP00000042215	TRANSLATION	protein_coding	-	CCDS39104.1	1	1164	6	6.788	9.8	461	12	-4,-6	-	-	18.924	MINOR
ENSMUSG00000037685	Atp8a1	ENSMUST00000113651	ENSMUSP00000109281	TRANSLATION	protein_coding	-	-	5	122	0	0	0	94	2	-4,-6	-	-	0	MINOR
ENSMUSG00000037685	Atp8a1	ENSMUST00000130652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037685	Atp8a1	ENSMUST00000155911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037685	Atp8a1	ENSMUST00000113652	ENSMUSP00000109282	TRANSLATION	protein_coding	-	-	1	175	0	0.5	0	127.1	2	-4,-6	-	-	0	MINOR
ENSMUSG00000037685	Atp8a1	ENSMUST00000200955	ENSMUSP00000144465	TRANSLATION	nonsense_mediated_decay	-	-	5	441	4	3.255	0	136.9	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000037685	Atp8a1	ENSMUST00000128726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037685	Atp8a1	ENSMUST00000143013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037685	Atp8a1	ENSMUST00000202248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037685	Atp8a1	ENSMUST00000141443	ENSMUSP00000121630	TRANSLATION	protein_coding	stop	-	5	106	0	0	0	79.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037685	Atp8a1	ENSMUST00000135930	ENSMUSP00000118379	TRANSLATION	protein_coding	-	CCDS39105.1	1	1149	6	7.528	7.4	470.6	12	-4,-6	-	-	20.163	PRINCIPAL:3
ENSMUSG00000037685	Atp8a1	ENSMUST00000152433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037685	Atp8a1	ENSMUST00000072971	ENSMUSP00000072738	TRANSLATION	protein_coding	-	CCDS80295.1	1	1164	6	7.538	9.4	470.6	12	-4,-6	-	-	20.865	ALTERNATIVE:1
ENSMUSG00000029166	Mapre3	ENSMUST00000201347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029166	Mapre3	ENSMUST00000031058	ENSMUSP00000031058	TRANSLATION	protein_coding	-	CCDS19163.1	1	281	3	6.25	10.8	121.5	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000029166	Mapre3	ENSMUST00000202025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029166	Mapre3	ENSMUST00000200692	ENSMUSP00000143890	TRANSLATION	protein_coding	-	CCDS80240.1	5	266	3	5.75	10.8	121.5	0	-4,-6	-	-	16.998	ALTERNATIVE:1
ENSMUSG00000029166	Mapre3	ENSMUST00000202501	ENSMUSP00000144591	TRANSLATION	protein_coding	stop	-	2	140	3	3	0	58.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029166	Mapre3	ENSMUST00000202256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043279	Trim56	ENSMUST00000152207	ENSMUSP00000117874	TRANSLATION	protein_coding	stop	-	3	212	12	0.8	0	70	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043279	Trim56	ENSMUST00000054384	ENSMUSP00000058109	TRANSLATION	protein_coding	-	CCDS19762.1	1	734	12	0.8	1.5	70	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049387	Cox7b2	ENSMUST00000050129	ENSMUSP00000060890	TRANSLATION	protein_coding	-	CCDS39106.1	1	82	0	1	1.5	122.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000916	Nsun5	ENSMUST00000202422	ENSMUSP00000143856	TRANSLATION	nonsense_mediated_decay	start	-	3	142	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000916	Nsun5	ENSMUST00000126454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000916	Nsun5	ENSMUST00000170342	ENSMUSP00000128370	TRANSLATION	nonsense_mediated_decay	-	-	3	91	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000000916	Nsun5	ENSMUST00000202792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000916	Nsun5	ENSMUST00000127746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000916	Nsun5	ENSMUST00000124453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000916	Nsun5	ENSMUST00000141867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000916	Nsun5	ENSMUST00000131863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000916	Nsun5	ENSMUST00000000940	ENSMUSP00000000940	TRANSLATION	protein_coding	-	CCDS19740.1	1	465	18	6.98	2.9	104.8	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000096066	Gm10424	ENSMUST00000180232	ENSMUSP00000136878	TRANSLATION	protein_coding	stop	-	5	407	0	0	0.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096066	Gm10424	ENSMUST00000201031	ENSMUSP00000144603	TRANSLATION	protein_coding	-	-	5	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000042726	Trafd1	ENSMUST00000133138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042726	Trafd1	ENSMUST00000155379	ENSMUSP00000118351	TRANSLATION	protein_coding	stop	-	5	87	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042726	Trafd1	ENSMUST00000202064	ENSMUSP00000144108	TRANSLATION	protein_coding	start	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042726	Trafd1	ENSMUST00000146185	ENSMUSP00000117239	TRANSLATION	protein_coding	stop	-	3	44	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042726	Trafd1	ENSMUST00000156158	ENSMUSP00000143426	TRANSLATION	nonsense_mediated_decay	start	-	1	215	8	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042726	Trafd1	ENSMUST00000120784	ENSMUSP00000113910	TRANSLATION	protein_coding	-	CCDS51639.1	1	576	20	1.83	0.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042726	Trafd1	ENSMUST00000042312	ENSMUSP00000047475	TRANSLATION	protein_coding	-	CCDS51638.1	1	580	20	1.83	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000042726	Trafd1	ENSMUST00000152265	ENSMUSP00000115159	TRANSLATION	protein_coding	stop	-	2	169	18	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042726	Trafd1	ENSMUST00000126550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040118	Cacna2d1	ENSMUST00000199236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040118	Cacna2d1	ENSMUST00000167946	ENSMUSP00000131507	TRANSLATION	protein_coding	-	-	5	1091	4	29.75	6.3	922.2	2	0,-3	-	-	17.107	MINOR
ENSMUSG00000040118	Cacna2d1	ENSMUST00000199704	ENSMUSP00000142881	TRANSLATION	protein_coding	-	CCDS80212.1	1	1079	4	29.9	7.6	922.2	2	0,-3	-	-	17.998	ALTERNATIVE:1
ENSMUSG00000040118	Cacna2d1	ENSMUST00000200270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040118	Cacna2d1	ENSMUST00000200294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040118	Cacna2d1	ENSMUST00000115281	ENSMUSP00000110936	TRANSLATION	protein_coding	-	CCDS51423.1	1	1086	4	29.735	7.6	922.2	2	0,-3	-	-	17.668	MINOR
ENSMUSG00000040118	Cacna2d1	ENSMUST00000078272	ENSMUSP00000077391	TRANSLATION	protein_coding	-	CCDS19096.1	1	1084	4	29.9	7.6	922.2	2	0,-3	-	-	17.998	PRINCIPAL:3
ENSMUSG00000040118	Cacna2d1	ENSMUST00000101581	ENSMUSP00000099117	TRANSLATION	protein_coding	-	CCDS51422.1	1	1091	4	29.735	7.6	922.2	2	0,-3	-	-	17.668	MINOR
ENSMUSG00000040118	Cacna2d1	ENSMUST00000196750	ENSMUSP00000143082	TRANSLATION	protein_coding	-	-	1	100	0	2.55	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000040118	Cacna2d1	ENSMUST00000180204	ENSMUSP00000136260	TRANSLATION	protein_coding	-	CCDS51423.1	1	1086	4	29.735	7.6	922.2	2	0,-3	-	-	17.668	MINOR
ENSMUSG00000040118	Cacna2d1	ENSMUST00000200158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040118	Cacna2d1	ENSMUST00000039370	ENSMUSP00000049457	TRANSLATION	protein_coding	-	CCDS51421.1	1	1103	4	30.4	7.6	922.2	2	0,-3	-	-	19	ALTERNATIVE:1
ENSMUSG00000029434	Vps33a	ENSMUST00000031388	ENSMUSP00000031388	TRANSLATION	protein_coding	-	CCDS19666.1	1	598	0	12.3	8.8	403.3	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000029434	Vps33a	ENSMUST00000200325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029434	Vps33a	ENSMUST00000197467	ENSMUSP00000142813	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	2.75	0	35.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029434	Vps33a	ENSMUST00000198900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094025	Gm8879	ENSMUST00000178863	ENSMUSP00000136711	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	81.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094025	Gm8879	ENSMUST00000170260	ENSMUSP00000128144	TRANSLATION	protein_coding	-	-	5	157	0	0	0.5	81.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046562	Unc119b	ENSMUST00000137140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046562	Unc119b	ENSMUST00000060798	ENSMUSP00000055475	TRANSLATION	protein_coding	-	CCDS19580.1	1	251	0	4.1	5.1	244.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046562	Unc119b	ENSMUST00000153403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059434	Gckr	ENSMUST00000202242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059434	Gckr	ENSMUST00000202909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059434	Gckr	ENSMUST00000072228	ENSMUSP00000072084	TRANSLATION	protein_coding	-	CCDS19182.1	1	587	0	16.25	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000059434	Gckr	ENSMUST00000202456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059434	Gckr	ENSMUST00000202312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059434	Gckr	ENSMUST00000201166	ENSMUSP00000144202	TRANSLATION	protein_coding	-	-	5	623	0	17.25	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059434	Gckr	ENSMUST00000201675	ENSMUSP00000144568	TRANSLATION	protein_coding	stop	-	5	121	0	3.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028978	Nos3	ENSMUST00000030834	ENSMUSP00000030834	TRANSLATION	protein_coding	-	CCDS19117.1	1	1202	78	9.95	1.5	1115.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000028978	Nos3	ENSMUST00000115090	ENSMUSP00000110742	TRANSLATION	protein_coding	-	-	1	1106	73	9.95	0	1097.9	0	-4,-5	-	-	13.614	MINOR
ENSMUSG00000053368	Rxfp2	ENSMUST00000201612	ENSMUSP00000144536	TRANSLATION	protein_coding	-	CCDS80479.1	1	727	0	10.69	0.5	221	9	2,-3	-	-	11.046	MINOR
ENSMUSG00000053368	Rxfp2	ENSMUST00000143989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053368	Rxfp2	ENSMUST00000110496	ENSMUSP00000106122	TRANSLATION	protein_coding	-	CCDS80480.1	1	713	0	10.39	0.5	218.3	9	2,-3	-	-	10.284	MINOR
ENSMUSG00000053368	Rxfp2	ENSMUST00000131212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053368	Rxfp2	ENSMUST00000065745	ENSMUSP00000067897	TRANSLATION	protein_coding	-	CCDS19886.1	1	737	0	11.14	5.1	221.9	9	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000053368	Rxfp2	ENSMUST00000138901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029286	Enam	ENSMUST00000199104	ENSMUSP00000142854	TRANSLATION	protein_coding	-	-	1	1349	0	0	0	1234.5	0	-3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000029286	Enam	ENSMUST00000031222	ENSMUSP00000031222	TRANSLATION	protein_coding	-	CCDS19400.1	1	1274	0	0	0.5	1234.5	0	-1,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000014668	Chfr	ENSMUST00000197968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014668	Chfr	ENSMUST00000197005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014668	Chfr	ENSMUST00000112519	ENSMUSP00000108138	TRANSLATION	protein_coding	-	CCDS71637.1	1	664	27	13.11	1.5	95.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000014668	Chfr	ENSMUST00000199557	ENSMUSP00000143113	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000199672	ENSMUSP00000143310	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000014812	ENSMUSP00000014812	TRANSLATION	protein_coding	-	CCDS19522.1	1	663	27	13.11	1.5	95.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000014668	Chfr	ENSMUST00000200038	ENSMUSP00000142354	TRANSLATION	protein_coding	-	-	1	51	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000199811	ENSMUSP00000143737	TRANSLATION	protein_coding	stop	-	5	114	0	3.41	0	60.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000199283	ENSMUSP00000143389	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000197010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014668	Chfr	ENSMUST00000198066	ENSMUSP00000142482	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014668	Chfr	ENSMUST00000198633	ENSMUSP00000143480	TRANSLATION	protein_coding	-	CCDS80358.1	1	592	27	13.11	0.5	95.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029263	Pigg	ENSMUST00000031189	ENSMUSP00000031189	TRANSLATION	protein_coding	-	CCDS39203.1	5	975	4	0	0.5	28.9	12	-3,-6	-	-	10	PRINCIPAL:3
ENSMUSG00000029263	Pigg	ENSMUST00000119014	ENSMUSP00000113818	TRANSLATION	protein_coding	-	CCDS80354.1	5	983	4	0	1.5	28.9	13	-3,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000029263	Pigg	ENSMUST00000118910	ENSMUSP00000112984	TRANSLATION	protein_coding	-	-	5	850	4	0	0	0	13	-3,-6	-	-	4	MINOR
ENSMUSG00000029417	Cxcl9	ENSMUST00000202404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029417	Cxcl9	ENSMUST00000113093	ENSMUSP00000108716	TRANSLATION	protein_coding	-	CCDS39152.1	1	126	0	1.55	0.5	62.4	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000004849	Ap1s1	ENSMUST00000150603	ENSMUSP00000115941	TRANSLATION	protein_coding	stop	-	2	189	0	3.066	0	205.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004849	Ap1s1	ENSMUST00000144303	ENSMUSP00000120895	TRANSLATION	protein_coding	stop	-	2	150	0	3.066	1.2	207.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000004849	Ap1s1	ENSMUST00000129356	ENSMUSP00000119458	TRANSLATION	protein_coding	stop	-	2	77	0	1	0	69.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004849	Ap1s1	ENSMUST00000111080	ENSMUSP00000106709	TRANSLATION	protein_coding	-	CCDS39330.1	1	158	0	3.5	21.5	207.3	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000004849	Ap1s1	ENSMUST00000154183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037390	Muc3	ENSMUST00000160630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037390	Muc3	ENSMUST00000041226	ENSMUSP00000045196	TRANSLATION	protein_coding	-	-	1	378	3	0	0	51.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000037936	Scarb1	ENSMUST00000137783	ENSMUSP00000117170	TRANSLATION	protein_coding	stop	-	5	94	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037936	Scarb1	ENSMUST00000156532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037936	Scarb1	ENSMUST00000123338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037936	Scarb1	ENSMUST00000086075	ENSMUSP00000083242	TRANSLATION	protein_coding	-	CCDS19683.1	1	509	0	8.87	5.1	510.5	2	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037936	Scarb1	ENSMUST00000148373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037936	Scarb1	ENSMUST00000127148	ENSMUSP00000122100	TRANSLATION	protein_coding	start	-	3	176	0	2.516	0	146.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037936	Scarb1	ENSMUST00000135736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037936	Scarb1	ENSMUST00000111390	ENSMUSP00000107021	TRANSLATION	protein_coding	-	CCDS57383.1	1	506	0	8.47	3.9	510.5	2	-1,-5	-	-	12.616	MINOR
ENSMUSG00000037936	Scarb1	ENSMUST00000124582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037936	Scarb1	ENSMUST00000197310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037936	Scarb1	ENSMUST00000133624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070733	Fryl	ENSMUST00000201405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070733	Fryl	ENSMUST00000094700	ENSMUSP00000092289	TRANSLATION	protein_coding	-	CCDS19337.2	2	3007	0	0	0.5	829.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070733	Fryl	ENSMUST00000175890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070733	Fryl	ENSMUST00000143665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000153903	ENSMUSP00000119385	TRANSLATION	protein_coding	start/stop	-	5	200	0	0	0	200.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000152631	ENSMUSP00000115208	TRANSLATION	protein_coding	start	-	3	124	0	0	0	153	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000146953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070733	Fryl	ENSMUST00000202381	ENSMUSP00000144183	TRANSLATION	protein_coding	start/stop	-	5	1464	0	0	0	254	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000101127	ENSMUSP00000098687	TRANSLATION	protein_coding	-	CCDS19337.2	5	3007	0	0	0.5	829.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070733	Fryl	ENSMUST00000201841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000148433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000202413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000202806	ENSMUSP00000143983	TRANSLATION	protein_coding	start	-	5	331	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000202697	ENSMUSP00000143824	TRANSLATION	protein_coding	start	-	5	1230	0	0	0	254	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000201200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000176910	ENSMUSP00000135794	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070733	Fryl	ENSMUST00000123446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000153923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000156661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070733	Fryl	ENSMUST00000201277	ENSMUSP00000144215	TRANSLATION	protein_coding	start/stop	-	3	241	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029191	Rfc1	ENSMUST00000204965	ENSMUSP00000144980	TRANSLATION	protein_coding	-	CCDS39096.1	1	1131	14	9.76	0.5	315.2	0	-4,-5	-	-	17.802	PRINCIPAL:3
ENSMUSG00000029191	Rfc1	ENSMUST00000203596	ENSMUSP00000145181	TRANSLATION	protein_coding	start/stop	-	2	212	0	0.932	0	158.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029191	Rfc1	ENSMUST00000205063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029191	Rfc1	ENSMUST00000203471	ENSMUSP00000144954	TRANSLATION	protein_coding	-	CCDS84885.1	1	1132	14	9.76	0.5	315.2	0	-4,-5	-	-	17.802	ALTERNATIVE:2
ENSMUSG00000029191	Rfc1	ENSMUST00000172732	ENSMUSP00000134444	TRANSLATION	protein_coding	-	CCDS84884.1	1	1130	14	9.86	0.5	315.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029191	Rfc1	ENSMUST00000203581	ENSMUSP00000145385	TRANSLATION	protein_coding	-	-	1	1145	14	9.86	0	315.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029191	Rfc1	ENSMUST00000203644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037221	Mospd3	ENSMUST00000037620	ENSMUSP00000040828	TRANSLATION	protein_coding	-	CCDS19771.1	1	235	0	0	6.3	56.3	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000037221	Mospd3	ENSMUST00000126904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037221	Mospd3	ENSMUST00000154708	ENSMUSP00000116851	TRANSLATION	protein_coding	stop	-	5	175	0	0	0	56.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037221	Mospd3	ENSMUST00000111007	ENSMUSP00000106636	TRANSLATION	protein_coding	-	CCDS19771.1	1	235	0	0	6.3	56.3	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000037221	Mospd3	ENSMUST00000133705	ENSMUSP00000122462	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037221	Mospd3	ENSMUST00000196366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035234	Abraxas1	ENSMUST00000153302	ENSMUSP00000116476	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0.45	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035234	Abraxas1	ENSMUST00000200657	ENSMUSP00000143465	TRANSLATION	nonsense_mediated_decay	-	-	1	407	0	3.47	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035234	Abraxas1	ENSMUST00000145707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035234	Abraxas1	ENSMUST00000131857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035234	Abraxas1	ENSMUST00000044535	ENSMUSP00000047692	TRANSLATION	nonsense_mediated_decay	-	-	1	261	0	2.52	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035234	Abraxas1	ENSMUST00000117364	ENSMUSP00000114050	TRANSLATION	protein_coding	-	CCDS19469.1	1	407	0	3.47	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035234	Abraxas1	ENSMUST00000129358	ENSMUSP00000117012	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	1.05	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035234	Abraxas1	ENSMUST00000055245	ENSMUSP00000055895	TRANSLATION	protein_coding	-	CCDS19469.1	1	407	0	3.47	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035234	Abraxas1	ENSMUST00000145429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091034	Gm17660	ENSMUST00000198485	ENSMUSP00000143623	TRANSLATION	protein_coding	-	CCDS51577.1	1	90	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000091034	Gm17660	ENSMUST00000164471	ENSMUSP00000132880	TRANSLATION	protein_coding	-	CCDS51577.1	1	90	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000091034	Gm17660	ENSMUST00000178967	ENSMUSP00000136896	TRANSLATION	protein_coding	-	CCDS51577.1	5	90	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000033794	Lpcat2b	ENSMUST00000166599	ENSMUSP00000127318	TRANSLATION	protein_coding	-	CCDS19502.1	3	516	10	0	1.5	68.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038564	Ift172	ENSMUST00000041565	ENSMUSP00000049335	TRANSLATION	protein_coding	-	CCDS39054.1	1	1749	0	2.42	10.8	12.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038564	Ift172	ENSMUST00000202585	ENSMUSP00000144216	TRANSLATION	protein_coding	start/stop	-	5	258	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038564	Ift172	ENSMUST00000201953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000200936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000201274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000201057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000202589	ENSMUSP00000143995	TRANSLATION	protein_coding	start	-	3	242	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038564	Ift172	ENSMUST00000201426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000202410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038564	Ift172	ENSMUST00000201809	ENSMUSP00000144425	TRANSLATION	protein_coding	-	-	5	83	0	0.44	0	12.3	0	-4,-6	-	-	7.092	MINOR
ENSMUSG00000038564	Ift172	ENSMUST00000202560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003623	Crot	ENSMUST00000146115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003623	Crot	ENSMUST00000157024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003623	Crot	ENSMUST00000003720	ENSMUSP00000003720	TRANSLATION	protein_coding	-	CCDS19087.1	1	612	13	15.5	4	580.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000029272	Sult1e1	ENSMUST00000031201	ENSMUSP00000031201	TRANSLATION	protein_coding	-	CCDS19392.1	1	295	20	7	3.9	300.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000070690	Albfm1	ENSMUST00000094615	ENSMUSP00000092198	TRANSLATION	protein_coding	-	CCDS57355.1	5	620	0	10.43	1.5	450	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070690	Albfm1	ENSMUST00000200765	ENSMUSP00000144527	TRANSLATION	protein_coding	-	-	5	355	0	5.38	0	246.3	0	-3,-6	-	-	0	MINOR
ENSMUSG00000029467	Atp2a2	ENSMUST00000179939	ENSMUSP00000135935	TRANSLATION	nonsense_mediated_decay	-	-	1	1044	19	18.33	17.1	474.9	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000029467	Atp2a2	ENSMUST00000031423	ENSMUSP00000031423	TRANSLATION	protein_coding	-	CCDS57378.1	1	1044	19	18.33	17.1	474.9	4	-4,-5	-	-	22	PRINCIPAL:4
ENSMUSG00000029467	Atp2a2	ENSMUST00000197415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029467	Atp2a2	ENSMUST00000196490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029467	Atp2a2	ENSMUST00000177974	ENSMUSP00000136104	TRANSLATION	protein_coding	-	CCDS57379.1	1	998	19	18.33	14.8	474.9	4	-4,-5	-	-	21.428	ALTERNATIVE:1
ENSMUSG00000029192	Tbc1d14	ENSMUST00000171385	ENSMUSP00000131876	TRANSLATION	protein_coding	-	CCDS51479.1	1	413	0	8.91	8.4	170.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000029192	Tbc1d14	ENSMUST00000173757	ENSMUSP00000134405	TRANSLATION	nonsense_mediated_decay	start	-	3	35	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000149157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029192	Tbc1d14	ENSMUST00000144997	ENSMUSP00000120017	TRANSLATION	protein_coding	stop	-	3	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000130417	ENSMUSP00000116519	TRANSLATION	protein_coding	-	CCDS51480.1	5	714	0	8.91	1.5	170.8	0	-4,-7	-	-	12.204	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000141626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029192	Tbc1d14	ENSMUST00000136189	ENSMUSP00000115467	TRANSLATION	protein_coding	-	-	1	618	0	6.58	0	62	0	-4,-5	-	-	1.338	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000150733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029192	Tbc1d14	ENSMUST00000150813	ENSMUSP00000115926	TRANSLATION	nonsense_mediated_decay	-	-	2	305	0	6.83	0	116.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000124036	ENSMUSP00000117414	TRANSLATION	protein_coding	-	CCDS51480.1	5	714	0	8.91	1.5	170.8	0	-4,-7	-	-	12.204	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000141017	ENSMUSP00000116217	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000126077	ENSMUSP00000114508	TRANSLATION	protein_coding	-	CCDS51479.1	5	413	0	8.91	8.4	170.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000029192	Tbc1d14	ENSMUST00000146430	ENSMUSP00000121816	TRANSLATION	protein_coding	-	CCDS19240.2	1	694	0	8.91	7.5	170.8	0	-4,-5	-	-	14.634	PRINCIPAL:3
ENSMUSG00000029192	Tbc1d14	ENSMUST00000136490	ENSMUSP00000117997	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000147603	ENSMUSP00000119408	TRANSLATION	protein_coding	stop	-	5	21	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000139182	ENSMUSP00000122452	TRANSLATION	protein_coding	stop	-	1	178	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000140607	ENSMUSP00000121516	TRANSLATION	protein_coding	-	CCDS19240.2	5	694	0	8.91	7.5	170.8	0	-4,-5	-	-	14.634	PRINCIPAL:3
ENSMUSG00000029192	Tbc1d14	ENSMUST00000173532	ENSMUSP00000133477	TRANSLATION	protein_coding	start	-	3	191	0	2.08	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000146252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029192	Tbc1d14	ENSMUST00000031094	ENSMUSP00000031094	TRANSLATION	protein_coding	-	CCDS19240.2	1	694	0	8.91	7.5	170.8	0	-4,-5	-	-	14.634	PRINCIPAL:3
ENSMUSG00000029192	Tbc1d14	ENSMUST00000156658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029192	Tbc1d14	ENSMUST00000140179	ENSMUSP00000116735	TRANSLATION	protein_coding	stop	-	5	260	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029192	Tbc1d14	ENSMUST00000139117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094840	Muc3a	ENSMUST00000196391	ENSMUSP00000143027	TRANSLATION	protein_coding	start	-	1	217	0	0	0	0	1	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094840	Muc3a	ENSMUST00000179412	ENSMUSP00000136061	TRANSLATION	protein_coding	start	-	1	218	0	0	0	0	1	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000049550	Clip1	ENSMUST00000125340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049550	Clip1	ENSMUST00000137602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049550	Clip1	ENSMUST00000154432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049550	Clip1	ENSMUST00000154672	ENSMUSP00000122064	TRANSLATION	protein_coding	start/stop	-	5	1182	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049550	Clip1	ENSMUST00000031382	ENSMUSP00000031382	TRANSLATION	protein_coding	-	-	5	1437	8	5.75	3.9	227.1	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000049550	Clip1	ENSMUST00000137363	ENSMUSP00000121425	TRANSLATION	protein_coding	start	-	5	1066	8	2.5	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049550	Clip1	ENSMUST00000111561	ENSMUSP00000107186	TRANSLATION	protein_coding	-	-	5	1426	8	5.75	3.9	227.1	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000049550	Clip1	ENSMUST00000111566	ENSMUSP00000107192	TRANSLATION	protein_coding	-	CCDS19667.1	1	1391	8	5.75	3.9	227.1	0	-4,-7	-	-	19	PRINCIPAL:3
ENSMUSG00000049550	Clip1	ENSMUST00000133545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049550	Clip1	ENSMUST00000199018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049550	Clip1	ENSMUST00000149410	ENSMUSP00000115965	TRANSLATION	protein_coding	stop	-	1	840	0	4.75	0	165	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049550	Clip1	ENSMUST00000144121	ENSMUSP00000119641	TRANSLATION	nonsense_mediated_decay	start	-	5	172	0	1.33	0	79.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049550	Clip1	ENSMUST00000198833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049550	Clip1	ENSMUST00000111564	ENSMUSP00000107190	TRANSLATION	protein_coding	-	CCDS71663.1	1	1315	8	5.75	0.5	227.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000049550	Clip1	ENSMUST00000063905	ENSMUSP00000068241	TRANSLATION	protein_coding	-	CCDS84958.1	5	1320	8	5.75	1.5	227.1	0	-4,-7	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000029174	Tbc1d1	ENSMUST00000140960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029174	Tbc1d1	ENSMUST00000043893	ENSMUSP00000044577	TRANSLATION	protein_coding	-	CCDS80287.1	2	1255	0	6	0.5	286.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000029174	Tbc1d1	ENSMUST00000119756	ENSMUSP00000113643	TRANSLATION	protein_coding	-	CCDS71593.1	1	1033	0	6	0.5	286.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000029174	Tbc1d1	ENSMUST00000121370	ENSMUSP00000112493	TRANSLATION	protein_coding	-	CCDS39094.1	1	1162	0	6	1.5	286.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000029174	Tbc1d1	ENSMUST00000147348	ENSMUSP00000119710	TRANSLATION	nonsense_mediated_decay	start	-	5	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029174	Tbc1d1	ENSMUST00000101195	ENSMUSP00000098756	TRANSLATION	protein_coding	-	CCDS39094.1	1	1162	0	6	1.5	286.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000029174	Tbc1d1	ENSMUST00000129389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029174	Tbc1d1	ENSMUST00000199270	ENSMUSP00000143451	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063656	Gm10135	ENSMUST00000043711	ENSMUSP00000049347	TRANSLATION	protein_coding	start	-	5	83	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000092094	Zfp804b	ENSMUST00000200317	ENSMUSP00000143568	TRANSLATION	protein_coding	-	CCDS80204.1	5	1343	4	0	0.5	29.3	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000092094	Zfp804b	ENSMUST00000164784	ENSMUSP00000130571	TRANSLATION	protein_coding	start	-	5	1307	4	0	0	29.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095996	Gm16513	ENSMUST00000201663	ENSMUSP00000144358	TRANSLATION	protein_coding	-	CCDS51558.1	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000095996	Gm16513	ENSMUST00000101023	ENSMUSP00000098585	TRANSLATION	protein_coding	-	CCDS51558.1	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000061388	Csn1s2b	ENSMUST00000113279	ENSMUSP00000108904	TRANSLATION	protein_coding	-	CCDS80319.1	1	138	0	0	0.5	58.7	0	4,-1	-	-	5.538	MINOR
ENSMUSG00000061388	Csn1s2b	ENSMUST00000101057	ENSMUSP00000098618	TRANSLATION	protein_coding	-	-	1	81	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000061388	Csn1s2b	ENSMUST00000197301	ENSMUSP00000142449	TRANSLATION	protein_coding	-	CCDS80320.1	5	132	0	0	0.5	61.4	0	4,-1	-	-	5.79	ALTERNATIVE:2
ENSMUSG00000061388	Csn1s2b	ENSMUST00000200098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061388	Csn1s2b	ENSMUST00000072539	ENSMUSP00000072352	TRANSLATION	protein_coding	-	CCDS39133.1	1	143	0	0	0.5	63.6	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000029674	Limk1	ENSMUST00000138590	ENSMUSP00000118268	TRANSLATION	protein_coding	start/stop	-	5	107	2	1.58	0	45.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029674	Limk1	ENSMUST00000137897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029674	Limk1	ENSMUST00000132027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029674	Limk1	ENSMUST00000015137	ENSMUSP00000015137	TRANSLATION	protein_coding	-	CCDS19724.1	1	647	29	11.45	5.1	342.8	0	-4,-5	-	-	19.334	PRINCIPAL:1
ENSMUSG00000029674	Limk1	ENSMUST00000111233	ENSMUSP00000106864	TRANSLATION	protein_coding	-	CCDS84969.1	1	639	30	11.45	0.5	287.6	0	-4,-2	-	-	14.688	MINOR
ENSMUSG00000029674	Limk1	ENSMUST00000134093	ENSMUSP00000121718	TRANSLATION	nonsense_mediated_decay	start	-	2	452	25	6.98	0	159.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045435	Tmem60	ENSMUST00000115259	ENSMUSP00000110914	TRANSLATION	protein_coding	-	CCDS19101.1	1	133	0	0	14.8	51.5	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000045435	Tmem60	ENSMUST00000196723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038656	Cyp3a16	ENSMUST00000031633	ENSMUSP00000031633	TRANSLATION	protein_coding	-	CCDS19862.1	1	504	31	11.1	7.5	436.6	0	0,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000029541	Cyp2w1	ENSMUST00000031521	ENSMUSP00000031521	TRANSLATION	protein_coding	-	CCDS51683.1	5	493	27	8.7	0.5	367.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029541	Cyp2w1	ENSMUST00000200478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029541	Cyp2w1	ENSMUST00000197955	ENSMUSP00000143138	TRANSLATION	protein_coding	start/stop	-	3	200	12	3.75	0	150.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000050050	Ccdc158	ENSMUST00000060930	ENSMUSP00000063050	TRANSLATION	protein_coding	-	CCDS19434.1	1	1109	0	0	0.5	2320	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050050	Ccdc158	ENSMUST00000150359	ENSMUSP00000123259	TRANSLATION	protein_coding	-	-	1	354	0	0	0	723.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050050	Ccdc158	ENSMUST00000212060	ENSMUSP00000148784	TRANSLATION	protein_coding	start/stop	-	3	197	0	0	0	428.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050050	Ccdc158	ENSMUST00000151180	ENSMUSP00000117894	TRANSLATION	protein_coding	-	-	1	354	0	0	0	723.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050050	Ccdc158	ENSMUST00000136004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029173	Sepsecs	ENSMUST00000031069	ENSMUSP00000031069	TRANSLATION	protein_coding	-	CCDS19286.1	1	504	13	12.58	1.5	596.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029173	Sepsecs	ENSMUST00000150709	ENSMUSP00000115477	TRANSLATION	nonsense_mediated_decay	-	-	1	91	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029173	Sepsecs	ENSMUST00000199425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029173	Sepsecs	ENSMUST00000123856	ENSMUSP00000114760	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029173	Sepsecs	ENSMUST00000126574	ENSMUSP00000114413	TRANSLATION	nonsense_mediated_decay	start	-	5	130	6	2	0	159.1	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000029161	Cgref1	ENSMUST00000202627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029161	Cgref1	ENSMUST00000031051	ENSMUSP00000031051	TRANSLATION	protein_coding	-	CCDS51454.1	1	325	8	0.7	1.5	0	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000041733	Coq5	ENSMUST00000129024	ENSMUSP00000123308	TRANSLATION	nonsense_mediated_decay	start	-	3	135	19	1.91	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041733	Coq5	ENSMUST00000201429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041733	Coq5	ENSMUST00000040421	ENSMUSP00000048001	TRANSLATION	protein_coding	-	CCDS19585.1	1	327	19	5.66	6.3	96.5	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000029281	Smr2	ENSMUST00000196070	ENSMUSP00000143443	TRANSLATION	protein_coding	-	CCDS80321.1	1	143	0	0	0.5	106.6	0	1,-2	-	-	5.178	ALTERNATIVE:2
ENSMUSG00000029281	Smr2	ENSMUST00000087043	ENSMUSP00000084271	TRANSLATION	protein_coding	-	CCDS39137.1	1	143	0	0	0.5	108.8	0	2,-3	-	-	5.31	PRINCIPAL:3
ENSMUSG00000029281	Smr2	ENSMUST00000199635	ENSMUSP00000142444	TRANSLATION	protein_coding	-	-	1	150	0	0	0	120.3	0	2,-3	-	-	6	MINOR
ENSMUSG00000029281	Smr2	ENSMUST00000196477	ENSMUSP00000142688	TRANSLATION	protein_coding	-	CCDS80321.1	1	143	0	0	0.5	106.6	0	1,-2	-	-	5.178	ALTERNATIVE:2
ENSMUSG00000029699	Ssc4d	ENSMUST00000153823	ENSMUSP00000122958	TRANSLATION	protein_coding	start/stop	-	3	166	4	1.33	0	105.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029699	Ssc4d	ENSMUST00000111152	ENSMUSP00000106782	TRANSLATION	protein_coding	-	CCDS51664.1	5	586	14	5.33	2.7	415.1	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029699	Ssc4d	ENSMUST00000154181	ENSMUSP00000123008	TRANSLATION	protein_coding	stop	-	5	174	5	2	0	107.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000029699	Ssc4d	ENSMUST00000111150	ENSMUSP00000106780	TRANSLATION	protein_coding	-	-	2	108	0	1	0	108.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000029699	Ssc4d	ENSMUST00000154696	ENSMUSP00000117071	TRANSLATION	protein_coding	start/stop	-	5	116	2	1	0	43.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029699	Ssc4d	ENSMUST00000111153	ENSMUSP00000106783	TRANSLATION	protein_coding	-	CCDS51664.1	5	586	14	5.33	2.7	415.1	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029699	Ssc4d	ENSMUST00000054895	ENSMUSP00000050439	TRANSLATION	protein_coding	-	-	1	134	0	1	0	108.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023078	Cxcl13	ENSMUST00000023840	ENSMUSP00000023840	TRANSLATION	protein_coding	-	CCDS19447.1	1	109	0	2.25	0.5	52.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034573	Ptpn13	ENSMUST00000196800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034573	Ptpn13	ENSMUST00000200581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034573	Ptpn13	ENSMUST00000196014	ENSMUSP00000143571	TRANSLATION	nonsense_mediated_decay	-	-	1	247	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034573	Ptpn13	ENSMUST00000199412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034573	Ptpn13	ENSMUST00000048957	ENSMUSP00000048119	TRANSLATION	protein_coding	-	CCDS39186.1	2	2451	9	12.3	0.5	940.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041697	Cox6a1	ENSMUST00000040154	ENSMUSP00000047661	TRANSLATION	protein_coding	-	CCDS19590.1	1	112	0	2.03	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000041697	Cox6a1	ENSMUST00000137766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040532	Abhd11	ENSMUST00000111216	ENSMUSP00000106847	TRANSLATION	protein_coding	-	CCDS51659.1	3	227	5	3.368	0.5	72.6	0	-4,-2	-	-	9.87	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000149778	ENSMUSP00000144553	TRANSLATION	nonsense_mediated_decay	-	-	2	78	3	1.398	0	43.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000154469	ENSMUSP00000144449	TRANSLATION	protein_coding	-	CCDS51659.1	1	227	5	3.368	0.5	72.6	0	-4,-2	-	-	9.87	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000201890	ENSMUSP00000144329	TRANSLATION	protein_coding	stop	-	5	59	0	0.36	0	0	0	1,4	-	-	-1	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000123227	ENSMUSP00000143994	TRANSLATION	nonsense_mediated_decay	-	-	5	158	5	2.753	0	95.1	0	1,3	-	-	-1	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000148831	ENSMUSP00000144595	TRANSLATION	nonsense_mediated_decay	-	-	3	67	3	1.198	0	41.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040532	Abhd11	ENSMUST00000046999	ENSMUSP00000043041	TRANSLATION	protein_coding	-	CCDS19730.1	1	307	7	4.723	1.5	134.3	0	1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000014529	Tmbim7	ENSMUST00000014673	ENSMUSP00000014673	TRANSLATION	protein_coding	-	CCDS19067.1	1	302	0	0	1.5	119.2	15	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000014529	Tmbim7	ENSMUST00000115515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014529	Tmbim7	ENSMUST00000156117	ENSMUSP00000117435	TRANSLATION	protein_coding	start	-	1	206	0	0	0	65.3	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000014529	Tmbim7	ENSMUST00000198739	ENSMUSP00000143399	TRANSLATION	protein_coding	-	CCDS80202.1	1	224	0	0	0.5	108.2	14	-4,-7	-	-	5.34	MINOR
ENSMUSG00000014529	Tmbim7	ENSMUST00000199959	ENSMUSP00000143241	TRANSLATION	protein_coding	stop	-	5	125	0	0	0	0	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000029415	Sdad1	ENSMUST00000202870	ENSMUSP00000144014	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029415	Sdad1	ENSMUST00000202604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029415	Sdad1	ENSMUST00000201532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029415	Sdad1	ENSMUST00000031364	ENSMUSP00000031364	TRANSLATION	protein_coding	-	CCDS19429.1	1	687	0	0	5.1	210.2	0	-4,-6	-	-	8	PRINCIPAL:2
ENSMUSG00000029415	Sdad1	ENSMUST00000201084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029415	Sdad1	ENSMUST00000201143	ENSMUSP00000144446	TRANSLATION	protein_coding	-	-	5	686	0	0	5.1	210.2	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000029415	Sdad1	ENSMUST00000202903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060371	Caln1	ENSMUST00000141131	ENSMUSP00000144225	TRANSLATION	protein_coding	stop	-	3	70	5	1.56	0	36.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060371	Caln1	ENSMUST00000111287	ENSMUSP00000106918	TRANSLATION	protein_coding	-	CCDS19714.1	1	219	12	3.18	19.5	88.6	2	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060371	Caln1	ENSMUST00000111288	ENSMUSP00000106919	TRANSLATION	protein_coding	-	CCDS19714.1	1	219	12	3.18	19.5	88.6	2	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060371	Caln1	ENSMUST00000202728	ENSMUSP00000143823	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060371	Caln1	ENSMUST00000086029	ENSMUSP00000083193	TRANSLATION	protein_coding	-	CCDS51656.1	1	261	12	3.18	5.2	88.6	2	-4,-5	-	-	18.908	MINOR
ENSMUSG00000029276	Glmn	ENSMUST00000078021	ENSMUSP00000077168	TRANSLATION	protein_coding	-	CCDS19505.1	1	596	0	14.86	1.5	327.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029276	Glmn	ENSMUST00000137939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029276	Glmn	ENSMUST00000143113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029276	Glmn	ENSMUST00000082121	ENSMUSP00000080766	TRANSLATION	protein_coding	-	CCDS19505.1	1	596	0	14.86	1.5	327.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029276	Glmn	ENSMUST00000148505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029276	Glmn	ENSMUST00000124546	ENSMUSP00000122129	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	2.5	0	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029276	Glmn	ENSMUST00000100949	ENSMUSP00000098509	TRANSLATION	protein_coding	-	CCDS51587.1	1	532	0	13.11	0.5	210.1	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000029276	Glmn	ENSMUST00000124140	ENSMUSP00000123224	TRANSLATION	protein_coding	stop	-	5	100	0	2.83	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050010	Shisa3	ENSMUST00000142843	ENSMUSP00000138599	TRANSLATION	nonsense_mediated_decay	-	-	2	100	0	1	0	93.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050010	Shisa3	ENSMUST00000087241	ENSMUSP00000084494	TRANSLATION	protein_coding	-	CCDS19318.1	1	238	0	1	1.5	183.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029550	Sppl3	ENSMUST00000128590	ENSMUSP00000143889	TRANSLATION	nonsense_mediated_decay	-	-	3	38	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000029550	Sppl3	ENSMUST00000128678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029550	Sppl3	ENSMUST00000150708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029550	Sppl3	ENSMUST00000201970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029550	Sppl3	ENSMUST00000031530	ENSMUSP00000031530	TRANSLATION	protein_coding	-	CCDS19578.1	1	384	0	0	12.8	314.7	10	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000037653	Kctd8	ENSMUST00000087231	ENSMUSP00000084484	TRANSLATION	protein_coding	-	-	1	346	2	0.6	0	58.8	0	-4,-5	-	-	14	ALTERNATIVE:2
ENSMUSG00000037653	Kctd8	ENSMUST00000054095	ENSMUSP00000055326	TRANSLATION	protein_coding	-	CCDS19320.1	1	476	2	0.6	1.5	58.8	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000035266	Helq	ENSMUST00000144948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035266	Helq	ENSMUST00000133845	ENSMUSP00000116470	TRANSLATION	protein_coding	start	-	1	972	12	11.17	0	96.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035266	Helq	ENSMUST00000198409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035266	Helq	ENSMUST00000155362	ENSMUSP00000120806	TRANSLATION	nonsense_mediated_decay	start	-	3	166	0	2.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035266	Helq	ENSMUST00000135102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035266	Helq	ENSMUST00000139203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035266	Helq	ENSMUST00000044684	ENSMUSP00000041599	TRANSLATION	protein_coding	-	CCDS39184.1	1	1069	12	12.37	1.5	96.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035266	Helq	ENSMUST00000151201	ENSMUSP00000118493	TRANSLATION	nonsense_mediated_decay	-	-	1	311	2	0.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035266	Helq	ENSMUST00000138417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035266	Helq	ENSMUST00000152554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018604	Tbx3	ENSMUST00000154680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018604	Tbx3	ENSMUST00000079719	ENSMUSP00000078657	TRANSLATION	protein_coding	-	CCDS19614.1	1	721	2	3.35	2.7	339	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000018604	Tbx3	ENSMUST00000145647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018604	Tbx3	ENSMUST00000202034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018604	Tbx3	ENSMUST00000018748	ENSMUSP00000018748	TRANSLATION	protein_coding	-	CCDS19613.1	1	741	2	2.975	2.7	330.8	0	-4,-7	-	-	12.758	MINOR
ENSMUSG00000018604	Tbx3	ENSMUST00000121021	ENSMUSP00000112519	TRANSLATION	protein_coding	-	CCDS19614.1	1	721	2	3.35	2.7	339	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000056076	Eif3b	ENSMUST00000199377	ENSMUSP00000143425	TRANSLATION	protein_coding	start	-	3	175	0	4.75	0	70.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056076	Eif3b	ENSMUST00000100507	ENSMUSP00000098076	TRANSLATION	protein_coding	-	CCDS19819.1	1	803	0	15.81	0.5	253.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056076	Eif3b	ENSMUST00000197632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029288	Ambn	ENSMUST00000198265	ENSMUSP00000142944	TRANSLATION	protein_coding	-	CCDS80322.1	1	422	0	0	1.5	697	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029288	Ambn	ENSMUST00000031226	ENSMUSP00000031226	TRANSLATION	protein_coding	-	CCDS51539.1	1	407	0	0	0.5	622.2	0	2,-2	-	-	1.512	MINOR
ENSMUSG00000060063	Alox5ap	ENSMUST00000071130	ENSMUSP00000071130	TRANSLATION	protein_coding	-	CCDS39407.1	1	161	0	4.58	15.8	40.1	4	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060063	Alox5ap	ENSMUST00000200806	ENSMUSP00000144472	TRANSLATION	protein_coding	stop	-	2	71	0	1.75	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000060063	Alox5ap	ENSMUST00000200928	ENSMUSP00000144115	TRANSLATION	protein_coding	-	-	3	73	0	1.75	0	0	2	-4,-2	-	-	0.342	MINOR
ENSMUSG00000060063	Alox5ap	ENSMUST00000202629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061578	Ksr2	ENSMUST00000073347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061578	Ksr2	ENSMUST00000180430	ENSMUSP00000137670	TRANSLATION	protein_coding	-	-	5	951	17	9	7.5	298.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054932	Afp	ENSMUST00000200693	ENSMUSP00000144019	TRANSLATION	protein_coding	stop	-	2	121	0	1.9	0	50.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000054932	Afp	ENSMUST00000201061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054932	Afp	ENSMUST00000202209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054932	Afp	ENSMUST00000200728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054932	Afp	ENSMUST00000042755	ENSMUSP00000041006	TRANSLATION	protein_coding	-	CCDS19413.1	1	605	0	11.2	0.5	481.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000049285	Mblac1	ENSMUST00000057773	ENSMUSP00000052869	TRANSLATION	protein_coding	-	CCDS19796.1	-	260	7	1	0.5	52.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000075551	Cyp3a41a	ENSMUST00000094111	ENSMUSP00000091659	TRANSLATION	protein_coding	-	CCDS19863.1	1	504	31	11.1	5.1	451.4	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029195	Klb	ENSMUST00000203333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029195	Klb	ENSMUST00000031096	ENSMUSP00000031096	TRANSLATION	protein_coding	-	CCDS19306.1	1	1043	1	2.8	0.5	674.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029195	Klb	ENSMUST00000205084	ENSMUSP00000145091	TRANSLATION	nonsense_mediated_decay	-	-	1	361	0	1.6	0	305	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034173	Zbed5	ENSMUST00000077320	ENSMUSP00000116455	TRANSLATION	protein_coding	stop	-	3	183	2	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000034173	Zbed5	ENSMUST00000202430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034173	Zbed5	ENSMUST00000041466	ENSMUSP00000044533	TRANSLATION	protein_coding	-	CCDS39292.1	1	756	3	0	1.5	0	0	-3,1	-	-	3	PRINCIPAL:1
ENSMUSG00000104713	Gbp6	ENSMUST00000200045	ENSMUSP00000142994	TRANSLATION	nonsense_mediated_decay	-	-	1	62	7	1	0	65.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104713	Gbp6	ENSMUST00000199944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000104713	Gbp6	ENSMUST00000196520	ENSMUSP00000142518	TRANSLATION	protein_coding	-	CCDS19492.1	5	611	16	8.8	0.5	768.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000600	Krit1	ENSMUST00000200004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000199845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000196098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000080085	ENSMUSP00000078985	TRANSLATION	protein_coding	-	CCDS39002.1	1	736	0	15.83	12.8	397.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000600	Krit1	ENSMUST00000199475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000197611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000198079	ENSMUSP00000142657	TRANSLATION	protein_coding	stop	-	3	132	0	2.75	0	133.6	0	0,-4	-	-	-1	MINOR
ENSMUSG00000000600	Krit1	ENSMUST00000200386	ENSMUSP00000143559	TRANSLATION	protein_coding	-	-	5	647	0	13.33	0	386.9	0	-4,-5	-	-	6.39	MINOR
ENSMUSG00000000600	Krit1	ENSMUST00000199234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000171023	ENSMUSP00000132375	TRANSLATION	protein_coding	-	CCDS51409.1	1	697	0	14.58	0.5	397.1	0	-4,-5	-	-	9.498	MINOR
ENSMUSG00000000600	Krit1	ENSMUST00000197742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000600	Krit1	ENSMUST00000200577	ENSMUSP00000143776	TRANSLATION	nonsense_mediated_decay	-	-	1	329	0	7.08	0	285	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036256	Igfbp7	ENSMUST00000046746	ENSMUSP00000045057	TRANSLATION	protein_coding	-	CCDS51529.1	1	282	0	2.72	1.5	111.3	0	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000036256	Igfbp7	ENSMUST00000163898	ENSMUSP00000128318	TRANSLATION	protein_coding	-	CCDS51530.1	5	313	0	2.72	0.5	111.3	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000029504	Ddx51	ENSMUST00000031478	ENSMUSP00000031478	TRANSLATION	protein_coding	-	CCDS19528.1	1	639	13	8.335	0.5	226.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029504	Ddx51	ENSMUST00000143087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029504	Ddx51	ENSMUST00000136442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029504	Ddx51	ENSMUST00000148773	ENSMUSP00000121481	TRANSLATION	nonsense_mediated_decay	start	-	2	34	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029504	Ddx51	ENSMUST00000136629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033540	Idua	ENSMUST00000159464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033540	Idua	ENSMUST00000139734	ENSMUSP00000117694	TRANSLATION	nonsense_mediated_decay	-	-	5	281	3	4.3	0	268.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000033540	Idua	ENSMUST00000133482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033540	Idua	ENSMUST00000140620	ENSMUSP00000119624	TRANSLATION	nonsense_mediated_decay	-	-	5	151	1	3.05	0	167.3	0	3,-1	-	-	-1	MINOR
ENSMUSG00000033540	Idua	ENSMUST00000151445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033540	Idua	ENSMUST00000119212	ENSMUSP00000113190	TRANSLATION	protein_coding	-	CCDS71635.1	1	596	11	13.38	0.5	628.1	0	4,-1	-	-	9.336	MINOR
ENSMUSG00000033540	Idua	ENSMUST00000112563	ENSMUSP00000108182	TRANSLATION	protein_coding	-	CCDS19516.2	1	643	12	14.38	2.7	731.2	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033540	Idua	ENSMUST00000071650	ENSMUSP00000071577	TRANSLATION	protein_coding	-	CCDS19516.2	1	643	12	14.38	2.7	731.2	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000057425	Ugt2b37	ENSMUST00000075858	ENSMUSP00000075255	TRANSLATION	protein_coding	-	CCDS19386.1	1	530	15	3.8	1.5	842.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029175	Slc35f6	ENSMUST00000198025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029175	Slc35f6	ENSMUST00000143867	ENSMUSP00000122703	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029175	Slc35f6	ENSMUST00000196740	ENSMUSP00000142761	TRANSLATION	protein_coding	-	-	5	319	0	0	1.7	42.3	8	-3,-5	-	-	6.318	MINOR
ENSMUSG00000029175	Slc35f6	ENSMUST00000062962	ENSMUSP00000058680	TRANSLATION	protein_coding	-	CCDS19161.1	1	372	0	0	7.6	42.3	9	2,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000029175	Slc35f6	ENSMUST00000199052	ENSMUSP00000142850	TRANSLATION	protein_coding	start	-	5	40	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029175	Slc35f6	ENSMUST00000124474	ENSMUSP00000120986	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029175	Slc35f6	ENSMUST00000131978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090963	Gm17655	ENSMUST00000210275	ENSMUSP00000148155	TRANSLATION	protein_coding	-	-	5	591	68	4	0	433.6	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000090963	Gm17655	ENSMUST00000167969	ENSMUSP00000128849	TRANSLATION	protein_coding	start/stop	-	-	85	12	1	0	67.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029310	Nudt9	ENSMUST00000031250	ENSMUSP00000031250	TRANSLATION	protein_coding	-	CCDS19482.1	1	350	16	6.83	3.9	32.9	0	-1,0	-	-	19	PRINCIPAL:1
ENSMUSG00000029310	Nudt9	ENSMUST00000150226	ENSMUSP00000114631	TRANSLATION	protein_coding	stop	-	5	213	9	5.08	0	30.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029310	Nudt9	ENSMUST00000142018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029310	Nudt9	ENSMUST00000128511	ENSMUSP00000119820	TRANSLATION	protein_coding	stop	-	5	158	3	4.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029310	Nudt9	ENSMUST00000148261	ENSMUSP00000115170	TRANSLATION	protein_coding	stop	-	5	109	0	2.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029310	Nudt9	ENSMUST00000134313	ENSMUSP00000117181	TRANSLATION	protein_coding	stop	-	5	152	2	3.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000142407	ENSMUSP00000122471	TRANSLATION	protein_coding	-	CCDS39098.1	1	200	0	5.75	15.5	198	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029203	Ube2k	ENSMUST00000200946	ENSMUSP00000144308	TRANSLATION	protein_coding	stop	-	5	73	0	2	0	32.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000202601	ENSMUSP00000144619	TRANSLATION	nonsense_mediated_decay	-	-	2	57	0	1.75	0	26.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000202572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029203	Ube2k	ENSMUST00000201292	ENSMUSP00000144060	TRANSLATION	protein_coding	-	-	1	97	0	2.75	15	75.3	0	3,-2	-	-	3.864	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000201383	ENSMUSP00000144580	TRANSLATION	protein_coding	-	-	5	157	0	4.75	2.4	141.4	0	-4,-5	-	-	6.994	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000202082	ENSMUSP00000144428	TRANSLATION	protein_coding	-	-	1	97	0	2.75	15	75.3	0	3,-2	-	-	3.864	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000201984	ENSMUSP00000143941	TRANSLATION	protein_coding	-	CCDS80289.1	3	149	0	4.25	6.6	128.1	0	-4,-6	-	-	6.35	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000202679	ENSMUSP00000144366	TRANSLATION	protein_coding	-	-	5	97	0	2.75	15	75.3	0	3,-2	-	-	3.864	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000201266	ENSMUSP00000144192	TRANSLATION	protein_coding	-	-	5	139	0	4	1.2	100.6	0	-4,-5	-	-	2.714	MINOR
ENSMUSG00000029203	Ube2k	ENSMUST00000202721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038181	Chpf2	ENSMUST00000121863	ENSMUSP00000112804	TRANSLATION	protein_coding	-	CCDS51436.1	5	768	0	0	1.5	490.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000038181	Chpf2	ENSMUST00000197318	ENSMUSP00000143185	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	71.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038181	Chpf2	ENSMUST00000197933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038181	Chpf2	ENSMUST00000088295	ENSMUSP00000085633	TRANSLATION	protein_coding	-	CCDS51436.1	2	768	0	0	1.5	490.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000038181	Chpf2	ENSMUST00000197566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038181	Chpf2	ENSMUST00000198521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029442	Wdr66	ENSMUST00000121964	ENSMUSP00000113309	TRANSLATION	protein_coding	-	-	5	1299	0	4.25	0	36.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029442	Wdr66	ENSMUST00000150155	ENSMUSP00000118944	TRANSLATION	nonsense_mediated_decay	start	-	1	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029442	Wdr66	ENSMUST00000069311	ENSMUSP00000069782	TRANSLATION	protein_coding	-	-	5	325	0	0.84	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029442	Wdr66	ENSMUST00000125979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029442	Wdr66	ENSMUST00000170536	ENSMUSP00000129769	TRANSLATION	protein_coding	-	-	5	549	0	2.57	0	12.5	0	-4,-7	-	-	4.674	MINOR
ENSMUSG00000029442	Wdr66	ENSMUST00000143629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029442	Wdr66	ENSMUST00000197763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029442	Wdr66	ENSMUST00000200666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029442	Wdr66	ENSMUST00000163092	ENSMUSP00000126995	TRANSLATION	protein_coding	-	-	5	495	0	2.57	0	12.5	0	-4,-6	-	-	4.674	MINOR
ENSMUSG00000035273	Hpse	ENSMUST00000045617	ENSMUSP00000044072	TRANSLATION	protein_coding	-	CCDS19466.1	1	535	8	11.1	0.5	0	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035273	Hpse	ENSMUST00000112908	ENSMUSP00000108529	TRANSLATION	protein_coding	-	-	1	483	8	10.1	0	0	0	3,-2	-	-	10.002	MINOR
ENSMUSG00000028958	Tmub1	ENSMUST00000238335	ENSMUSP00000158761	TRANSLATION	protein_coding	-	-	-	352	0	0.53	0	0	1	-1,-4	-	-	2.388	MINOR
ENSMUSG00000028958	Tmub1	ENSMUST00000123167	ENSMUSP00000122487	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000028958	Tmub1	ENSMUST00000030799	ENSMUSP00000030799	TRANSLATION	protein_coding	-	CCDS19121.1	1	245	0	1.33	5.1	32.5	2	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000028958	Tmub1	ENSMUST00000115036	ENSMUSP00000110688	TRANSLATION	protein_coding	-	-	5	260	0	1.33	0	32.5	2	-4,-7	-	-	12	MINOR
ENSMUSG00000028958	Tmub1	ENSMUST00000115033	ENSMUSP00000110685	TRANSLATION	protein_coding	-	CCDS19121.1	5	245	0	1.33	5.1	32.5	2	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000028958	Tmub1	ENSMUST00000127194	ENSMUSP00000123173	TRANSLATION	protein_coding	stop	-	3	203	0	1.33	0	32.5	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000036639	Nudt1	ENSMUST00000110825	ENSMUSP00000106449	TRANSLATION	protein_coding	-	-	2	151	4	2.2	0	45	0	-2,0	-	-	12.418	MINOR
ENSMUSG00000036639	Nudt1	ENSMUST00000110827	ENSMUSP00000106451	TRANSLATION	protein_coding	-	CCDS19818.1	5	156	4	3.5	17.3	53.8	0	-2,0	-	-	20	PRINCIPAL:1
ENSMUSG00000036639	Nudt1	ENSMUST00000110826	ENSMUSP00000106450	TRANSLATION	protein_coding	-	CCDS19818.1	1	156	4	3.5	17.3	53.8	0	-2,0	-	-	20	PRINCIPAL:1
ENSMUSG00000036639	Nudt1	ENSMUST00000071881	ENSMUSP00000071778	TRANSLATION	protein_coding	-	CCDS19818.1	1	156	4	3.5	17.3	53.8	0	-2,0	-	-	20	PRINCIPAL:1
ENSMUSG00000036639	Nudt1	ENSMUST00000145898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036639	Nudt1	ENSMUST00000198660	ENSMUSP00000143140	TRANSLATION	protein_coding	stop	-	5	112	4	2.5	0	51.3	0	-2,0	-	-	-1	MINOR
ENSMUSG00000036639	Nudt1	ENSMUST00000050205	ENSMUSP00000059983	TRANSLATION	protein_coding	-	CCDS19818.1	1	156	4	3.5	17.3	53.8	0	-2,0	-	-	20	PRINCIPAL:1
ENSMUSG00000063820	Arl9	ENSMUST00000134197	ENSMUSP00000122846	TRANSLATION	protein_coding	start	-	5	171	14	2.28	0	125.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063820	Arl9	ENSMUST00000071199	ENSMUSP00000071188	TRANSLATION	protein_coding	-	CCDS19368.1	2	133	11	1.95	0.5	101.5	0	-4,-5	-	-	13.686	PRINCIPAL:1
ENSMUSG00000029616	Erp29	ENSMUST00000052590	ENSMUSP00000059275	TRANSLATION	protein_coding	-	-	1	55	0	0.8	0	0	0	4,-1	-	-	1.716	MINOR
ENSMUSG00000029616	Erp29	ENSMUST00000130451	ENSMUSP00000117347	TRANSLATION	protein_coding	-	CCDS19634.1	1	262	0	2.8	2.7	272	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029616	Erp29	ENSMUST00000153758	ENSMUSP00000122522	TRANSLATION	nonsense_mediated_decay	-	-	1	95	0	0.8	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000029616	Erp29	ENSMUST00000111802	ENSMUSP00000107433	TRANSLATION	nonsense_mediated_decay	-	-	2	57	0	0.8	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000094205	Gm8926	ENSMUST00000178158	ENSMUSP00000136071	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	80.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094205	Gm8926	ENSMUST00000167566	ENSMUSP00000132103	TRANSLATION	protein_coding	start	-	1	181	0	0	0	80.7	0	-4,-7	-	-	-1	PRINCIPAL:3
ENSMUSG00000029581	Fscn1	ENSMUST00000137552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029581	Fscn1	ENSMUST00000135293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029581	Fscn1	ENSMUST00000031565	ENSMUSP00000031565	TRANSLATION	protein_coding	-	CCDS19834.1	1	493	0	8.83	10.8	408.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029581	Fscn1	ENSMUST00000139131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029581	Fscn1	ENSMUST00000129306	ENSMUSP00000122862	TRANSLATION	protein_coding	start	-	3	241	0	4.83	0	194.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029581	Fscn1	ENSMUST00000150622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029581	Fscn1	ENSMUST00000198017	ENSMUSP00000142509	TRANSLATION	protein_coding	-	-	5	332	0	6.5	0	241.5	0	-4,-5	-	-	1.338	MINOR
ENSMUSG00000062329	Cytl1	ENSMUST00000073554	ENSMUSP00000073244	TRANSLATION	protein_coding	-	CCDS39077.1	1	139	0	0	0.5	205.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000062329	Cytl1	ENSMUST00000201048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029426	Scarb2	ENSMUST00000031377	ENSMUSP00000031377	TRANSLATION	protein_coding	-	CCDS19431.1	1	478	0	9.45	5.1	510.3	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000029426	Scarb2	ENSMUST00000201253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029151	Slc30a3	ENSMUST00000202731	ENSMUSP00000144574	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029151	Slc30a3	ENSMUST00000202740	ENSMUSP00000144566	TRANSLATION	protein_coding	-	CCDS84861.1	5	339	0	0	2.7	149.7	7	-4,-7	-	-	6.83	MINOR
ENSMUSG00000029151	Slc30a3	ENSMUST00000200906	ENSMUSP00000144098	TRANSLATION	protein_coding	stop	-	5	173	0	0	0	84.2	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000029151	Slc30a3	ENSMUST00000201783	ENSMUSP00000144353	TRANSLATION	protein_coding	start	-	2	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029151	Slc30a3	ENSMUST00000031037	ENSMUSP00000031037	TRANSLATION	protein_coding	-	CCDS51455.1	1	388	0	0	5.1	149.7	7	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000029151	Slc30a3	ENSMUST00000201396	ENSMUSP00000144295	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	82.5	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000010721	Lmbr1	ENSMUST00000198367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010721	Lmbr1	ENSMUST00000198105	ENSMUSP00000142755	TRANSLATION	protein_coding	-	-	1	463	0	0	0	260.7	15	-4,-7	-	-	2.664	MINOR
ENSMUSG00000010721	Lmbr1	ENSMUST00000200564	ENSMUSP00000143316	TRANSLATION	protein_coding	-	-	5	313	0	0	1.2	172.2	12	-3,-6	-	-	0.078	MINOR
ENSMUSG00000010721	Lmbr1	ENSMUST00000200149	ENSMUSP00000142987	TRANSLATION	nonsense_mediated_decay	start	-	3	110	0	0	0	38.8	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000010721	Lmbr1	ENSMUST00000055195	ENSMUSP00000058405	TRANSLATION	protein_coding	-	CCDS19148.1	1	490	0	0	8.8	316.3	16	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000010721	Lmbr1	ENSMUST00000196321	ENSMUSP00000143348	TRANSLATION	protein_coding	-	-	1	367	0	0	6.1	209.1	13	-3,-6	-	-	1.962	MINOR
ENSMUSG00000010721	Lmbr1	ENSMUST00000179191	ENSMUSP00000136160	TRANSLATION	protein_coding	-	-	5	462	0	0	0	257.9	15	-4,-7	-	-	2.496	MINOR
ENSMUSG00000096878	Gm21083	ENSMUST00000188807	ENSMUSP00000143130	TRANSLATION	protein_coding	-	CCDS80211.1	1	256	0	0	0.5	99.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029267	Mtf2	ENSMUST00000163195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000170319	ENSMUSP00000130536	TRANSLATION	protein_coding	stop	-	3	162	14	2.08	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000112626	ENSMUSP00000108245	TRANSLATION	protein_coding	-	-	5	536	16	4.844	3.6	141.1	0	-4,-2	-	-	18.744	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000134026	ENSMUSP00000128797	TRANSLATION	nonsense_mediated_decay	-	-	5	282	16	4.844	0	47.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000129921	ENSMUSP00000137843	TRANSLATION	nonsense_mediated_decay	start	-	5	129	3	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000081567	ENSMUSP00000080278	TRANSLATION	protein_coding	-	CCDS39201.1	1	593	16	4.844	11.5	141.1	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000029267	Mtf2	ENSMUST00000137996	ENSMUSP00000121697	TRANSLATION	protein_coding	start/stop	-	5	239	16	2.58	0	47.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000141592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000124195	ENSMUSP00000126297	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	1.132	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000143412	ENSMUSP00000132596	TRANSLATION	nonsense_mediated_decay	-	-	1	118	0	2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029267	Mtf2	ENSMUST00000131291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000199194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029267	Mtf2	ENSMUST00000131264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000163823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000198662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029267	Mtf2	ENSMUST00000172045	ENSMUSP00000126452	TRANSLATION	protein_coding	stop	-	3	49	7	1.58	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061898	Rbak	ENSMUST00000199880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061898	Rbak	ENSMUST00000166382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061898	Rbak	ENSMUST00000049861	ENSMUSP00000059273	TRANSLATION	protein_coding	-	CCDS19835.1	1	711	59	1.4	1.5	408.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061898	Rbak	ENSMUST00000165318	ENSMUSP00000128731	TRANSLATION	protein_coding	-	CCDS19835.1	1	711	59	1.4	1.5	408.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000029233	Srd5a3	ENSMUST00000138699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029233	Srd5a3	ENSMUST00000127278	ENSMUSP00000116801	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000029233	Srd5a3	ENSMUST00000113506	ENSMUSP00000109134	TRANSLATION	protein_coding	-	-	5	206	0	0	0	73.6	6	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000029233	Srd5a3	ENSMUST00000149222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029233	Srd5a3	ENSMUST00000152642	ENSMUSP00000115297	TRANSLATION	protein_coding	stop	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029233	Srd5a3	ENSMUST00000124217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029233	Srd5a3	ENSMUST00000031143	ENSMUSP00000031143	TRANSLATION	protein_coding	-	CCDS19358.1	1	330	0	0	1.5	73.6	7	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000029233	Srd5a3	ENSMUST00000113507	ENSMUSP00000109135	TRANSLATION	protein_coding	-	-	1	206	0	0	0	73.6	6	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000006641	Slc5a6	ENSMUST00000202556	ENSMUSP00000143993	TRANSLATION	protein_coding	-	CCDS19169.1	5	634	0	4.5988	0.5	132.5	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006641	Slc5a6	ENSMUST00000201017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006641	Slc5a6	ENSMUST00000200816	ENSMUSP00000144665	TRANSLATION	protein_coding	stop	-	2	81	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000006641	Slc5a6	ENSMUST00000202984	ENSMUSP00000144349	TRANSLATION	protein_coding	start/stop	-	3	195	0	2.0688	0	47.3	3	-1,-4	-	-	-1	MINOR
ENSMUSG00000006641	Slc5a6	ENSMUST00000114668	ENSMUSP00000110316	TRANSLATION	protein_coding	-	CCDS19169.1	1	634	0	4.5988	0.5	132.5	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006641	Slc5a6	ENSMUST00000202520	ENSMUSP00000143938	TRANSLATION	protein_coding	-	CCDS19169.1	1	634	0	4.5988	0.5	132.5	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006641	Slc5a6	ENSMUST00000080431	ENSMUSP00000079291	TRANSLATION	protein_coding	-	CCDS19169.1	1	634	0	4.5988	0.5	132.5	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000106892	Gm42791	ENSMUST00000147473	ENSMUSP00000120502	TRANSLATION	protein_coding,RT	stop	-	5	209	0	1.4	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000106892	Gm42791	ENSMUST00000134031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023328	Ache	ENSMUST00000196208	ENSMUSP00000142427	TRANSLATION	protein_coding	-	-	5	526	10	5	1.2	580.4	0	3,-2	-	-	11.169	MINOR
ENSMUSG00000023328	Ache	ENSMUST00000024099	ENSMUSP00000024099	TRANSLATION	protein_coding	-	CCDS19763.1	1	614	11	6	7.5	651.4	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000023328	Ache	ENSMUST00000132191	ENSMUSP00000117452	TRANSLATION	protein_coding	stop	-	1	40	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023328	Ache	ENSMUST00000141123	ENSMUSP00000123295	TRANSLATION	protein_coding	stop	-	1	40	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023328	Ache	ENSMUST00000137126	ENSMUSP00000123248	TRANSLATION	protein_coding	stop	-	1	40	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023328	Ache	ENSMUST00000150983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023328	Ache	ENSMUST00000138591	ENSMUSP00000121378	TRANSLATION	protein_coding	stop	-	1	40	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023328	Ache	ENSMUST00000085934	ENSMUSP00000083097	TRANSLATION	protein_coding	-	CCDS19763.1	1	614	11	6	7.5	651.4	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000023328	Ache	ENSMUST00000125195	ENSMUSP00000119813	TRANSLATION	protein_coding	stop	-	1	40	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000029505	Ep400	ENSMUST00000112433	ENSMUSP00000108052	TRANSLATION	protein_coding	-	-	1	686	0	0	0	870.8	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029505	Ep400	ENSMUST00000041558	ENSMUSP00000049038	TRANSLATION	protein_coding	-	CCDS19529.1	1	3035	3	7.56	0.5	1035.2	0	-4,-2	-	-	11.64	PRINCIPAL:3
ENSMUSG00000029505	Ep400	ENSMUST00000112435	ENSMUSP00000108054	TRANSLATION	protein_coding	-	-	5	2909	3	5.76	0	1091.2	0	-4,-2	-	-	11.4	MINOR
ENSMUSG00000029505	Ep400	ENSMUST00000125325	ENSMUSP00000116137	TRANSLATION	protein_coding	start/stop	-	5	325	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029505	Ep400	ENSMUST00000112436	ENSMUSP00000108055	TRANSLATION	protein_coding	-	CCDS51612.1	1	2999	3	7.56	0.5	1035.2	0	-4,-2	-	-	11.64	ALTERNATIVE:2
ENSMUSG00000029505	Ep400	ENSMUST00000144581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029505	Ep400	ENSMUST00000129884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029505	Ep400	ENSMUST00000146458	ENSMUSP00000138369	TRANSLATION	protein_coding	-	-	1	649	0	0	0	775.1	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029505	Ep400	ENSMUST00000146652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029505	Ep400	ENSMUST00000141986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029505	Ep400	ENSMUST00000122901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072647	Adam1a	ENSMUST00000200170	ENSMUSP00000143668	TRANSLATION	protein_coding	-	-	2	471	19	7.43	14.8	209.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000072647	Adam1a	ENSMUST00000100757	ENSMUSP00000098320	TRANSLATION	protein_coding	-	CCDS19637.1	-	791	18	0.4	0.5	457.3	0	-4,0	-	-	11.334	MINOR
ENSMUSG00000014956	Ppp1cb	ENSMUST00000201207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014956	Ppp1cb	ENSMUST00000015100	ENSMUSP00000015100	TRANSLATION	protein_coding	-	CCDS19193.1	1	327	10	7.75	17.5	208.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000014956	Ppp1cb	ENSMUST00000201600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014956	Ppp1cb	ENSMUST00000202078	ENSMUSP00000144167	TRANSLATION	protein_coding	-	-	5	59	1	1.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014956	Ppp1cb	ENSMUST00000201880	ENSMUSP00000144350	TRANSLATION	nonsense_mediated_decay	start	-	5	100	1	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014956	Ppp1cb	ENSMUST00000201360	ENSMUSP00000144047	TRANSLATION	nonsense_mediated_decay	-	-	1	327	10	7.75	17.5	208.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069720	4930572O03Rik	ENSMUST00000092696	ENSMUSP00000090370	TRANSLATION	protein_coding	-	-	1	211	0	0	0.5	99.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029270	Dipk1a	ENSMUST00000145239	ENSMUSP00000117801	TRANSLATION	protein_coding	stop	-	2	284	0	0	0	258.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029270	Dipk1a	ENSMUST00000031198	ENSMUSP00000031198	TRANSLATION	protein_coding	-	CCDS39200.1	1	428	0	0	11.6	422.1	1	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000029270	Dipk1a	ENSMUST00000153172	ENSMUSP00000114892	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	95.7	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000002944	Cd36	ENSMUST00000165232	ENSMUSP00000126300	TRANSLATION	protein_coding	-	CCDS19100.1	1	472	0	10.5	8.8	498.2	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002944	Cd36	ENSMUST00000197890	ENSMUSP00000143061	TRANSLATION	protein_coding	-	CCDS19100.1	1	472	0	10.5	8.8	498.2	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002944	Cd36	ENSMUST00000170051	ENSMUSP00000133008	TRANSLATION	protein_coding	-	CCDS19100.1	1	472	0	10.5	8.8	498.2	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002944	Cd36	ENSMUST00000082367	ENSMUSP00000080974	TRANSLATION	protein_coding	-	CCDS19100.1	1	472	0	10.5	8.8	498.2	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002944	Cd36	ENSMUST00000169095	ENSMUSP00000131832	TRANSLATION	protein_coding	-	CCDS19100.1	1	472	0	10.5	8.8	498.2	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002944	Cd36	ENSMUST00000197574	ENSMUSP00000143107	TRANSLATION	protein_coding	stop	-	5	142	0	3	0	123.6	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000036403	Cep135	ENSMUST00000121979	ENSMUSP00000112602	TRANSLATION	protein_coding	-	CCDS19365.1	5	1140	0	2.4	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036403	Cep135	ENSMUST00000049060	ENSMUSP00000038674	TRANSLATION	protein_coding	-	CCDS19365.1	1	1140	0	2.4	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036403	Cep135	ENSMUST00000130651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029635	Cdk8	ENSMUST00000160924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029635	Cdk8	ENSMUST00000162494	ENSMUSP00000125516	TRANSLATION	nonsense_mediated_decay	-	-	5	164	13	4.58	0	80.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029635	Cdk8	ENSMUST00000195944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029635	Cdk8	ENSMUST00000198861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029635	Cdk8	ENSMUST00000031640	ENSMUSP00000031640	TRANSLATION	protein_coding	-	CCDS19869.1	2	464	17	12.41	17.5	209.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029635	Cdk8	ENSMUST00000159467	ENSMUSP00000124525	TRANSLATION	protein_coding	stop	-	3	115	9	2.88	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029635	Cdk8	ENSMUST00000159615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029635	Cdk8	ENSMUST00000161652	ENSMUSP00000124323	TRANSLATION	protein_coding	stop	-	5	245	17	7.58	0	140.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029635	Cdk8	ENSMUST00000161181	ENSMUSP00000125668	TRANSLATION	protein_coding	-	-	1	399	9	10.91	0	160	0	-4,-6	-	-	6.702	MINOR
ENSMUSG00000053129	Gsx1	ENSMUST00000065382	ENSMUSP00000069728	TRANSLATION	protein_coding	-	CCDS19877.1	1	261	0	0.8	5.1	77.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029337	Fgf5	ENSMUST00000031280	ENSMUSP00000031280	TRANSLATION	protein_coding	-	CCDS19455.1	1	264	7	2.2	1.5	145.8	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029337	Fgf5	ENSMUST00000200059	ENSMUSP00000142420	TRANSLATION	protein_coding	-	CCDS80344.1	1	121	1	0.4	1.5	22.8	0	3,-1	-	-	1.95	MINOR
ENSMUSG00000029510	Gpc2	ENSMUST00000159689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029510	Gpc2	ENSMUST00000161984	ENSMUSP00000137879	TRANSLATION	nonsense_mediated_decay	-	-	1	342	0	4.55	0	435.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000029510	Gpc2	ENSMUST00000161055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029510	Gpc2	ENSMUST00000159350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029510	Gpc2	ENSMUST00000014089	ENSMUSP00000014089	TRANSLATION	protein_coding	-	-	5	570	0	6.43	0	624.7	0	1,-2	-	-	9.858	MINOR
ENSMUSG00000029510	Gpc2	ENSMUST00000161827	ENSMUSP00000124459	TRANSLATION	protein_coding	-	CCDS19799.1	1	579	0	6.628	0.5	653.8	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029510	Gpc2	ENSMUST00000162909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029502	Golga3	ENSMUST00000031477	ENSMUSP00000031477	TRANSLATION	protein_coding	-	CCDS84928.1	5	1487	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029502	Golga3	ENSMUST00000125380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029502	Golga3	ENSMUST00000136900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029502	Golga3	ENSMUST00000112512	ENSMUSP00000108131	TRANSLATION	protein_coding	-	CCDS39209.1	1	1447	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000029502	Golga3	ENSMUST00000139611	ENSMUSP00000115367	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000012734	ENSMUSP00000012734	TRANSLATION	protein_coding	-	CCDS19152.1	1	261	0	2.94	1.5	97.2	0	-4,-5	-	-	11.304	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000196528	ENSMUSP00000142878	TRANSLATION	protein_coding	-	-	5	243	0	3.39	0	97.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000149553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029131	Dnajb6	ENSMUST00000127753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029131	Dnajb6	ENSMUST00000008733	ENSMUSP00000008733	TRANSLATION	protein_coding	-	CCDS19151.1	1	365	0	3.39	0.5	97.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000151976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029131	Dnajb6	ENSMUST00000198694	ENSMUSP00000142783	TRANSLATION	protein_coding	-	-	3	62	0	1.698	0	76.6	0	-4,-5	-	-	7.344	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000140376	ENSMUSP00000117159	TRANSLATION	protein_coding	start	-	2	231	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000139126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029131	Dnajb6	ENSMUST00000114839	ENSMUSP00000110488	TRANSLATION	protein_coding	-	CCDS39043.1	1	242	0	3.39	8.4	97.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029131	Dnajb6	ENSMUST00000196785	ENSMUSP00000143639	TRANSLATION	protein_coding	stop	-	3	22	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029131	Dnajb6	ENSMUST00000149396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041930	Fam222a	ENSMUST00000043650	ENSMUSP00000045724	TRANSLATION	protein_coding	-	CCDS19567.1	1	453	0	0	3.9	131.3	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000041930	Fam222a	ENSMUST00000130983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064037	Gpn1	ENSMUST00000200870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064037	Gpn1	ENSMUST00000202515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064037	Gpn1	ENSMUST00000076949	ENSMUSP00000076217	TRANSLATION	protein_coding	-	CCDS19185.1	1	372	15	7.15	0.5	284.8	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000064037	Gpn1	ENSMUST00000202394	ENSMUSP00000144105	TRANSLATION	protein_coding	-	-	1	91	7	2.166	0	84.8	0	-3,-6	-	-	0.666	MINOR
ENSMUSG00000064037	Gpn1	ENSMUST00000201053	ENSMUSP00000144015	TRANSLATION	nonsense_mediated_decay	-	-	5	85	7	1.6	0	59.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000064037	Gpn1	ENSMUST00000201942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064037	Gpn1	ENSMUST00000201881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004642	Slbp	ENSMUST00000143029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004642	Slbp	ENSMUST00000139518	ENSMUSP00000144475	TRANSLATION	protein_coding	-	-	2	219	0	2	0	101.1	0	-4,-7	-	-	11.22	ALTERNATIVE:2
ENSMUSG00000004642	Slbp	ENSMUST00000146889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004642	Slbp	ENSMUST00000057551	ENSMUSP00000062930	TRANSLATION	protein_coding	-	CCDS19205.1	1	275	0	2.3	1.5	101.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000004642	Slbp	ENSMUST00000148153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004642	Slbp	ENSMUST00000126581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004642	Slbp	ENSMUST00000075670	ENSMUSP00000075093	TRANSLATION	protein_coding	-	-	1	250	0	2.3	0	101.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000004642	Slbp	ENSMUST00000151081	ENSMUSP00000121978	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004642	Slbp	ENSMUST00000101354	ENSMUSP00000098906	TRANSLATION	protein_coding	-	CCDS80257.1	1	255	0	2.3	0.5	101.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000019054	Fis1	ENSMUST00000152658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019054	Fis1	ENSMUST00000019198	ENSMUSP00000019198	TRANSLATION	protein_coding	-	CCDS19757.1	1	152	0	4.25	11	143.3	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019054	Fis1	ENSMUST00000147557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019054	Fis1	ENSMUST00000138610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019054	Fis1	ENSMUST00000111094	ENSMUSP00000106723	TRANSLATION	protein_coding	-	CCDS51669.1	2	145	0	3.816	1.5	143.3	1	-4,-6	-	-	11.28	MINOR
ENSMUSG00000019054	Fis1	ENSMUST00000111097	ENSMUSP00000106726	TRANSLATION	protein_coding	-	CCDS84977.1	2	102	0	2.816	0.5	86.6	1	-4,-5	-	-	5.73	MINOR
ENSMUSG00000063409	Lrrc43	ENSMUST00000121444	ENSMUSP00000113933	TRANSLATION	protein_coding	-	CCDS71662.1	1	660	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000063409	Lrrc43	ENSMUST00000094327	ENSMUSP00000091885	TRANSLATION	protein_coding	-	CCDS19664.1	1	667	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000063409	Lrrc43	ENSMUST00000196809	ENSMUSP00000143602	TRANSLATION	protein_coding	-	CCDS80402.1	1	657	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038095	Sbno1	ENSMUST00000199245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000196842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000199004	ENSMUSP00000143314	TRANSLATION	nonsense_mediated_decay	-	-	2	263	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000200474	ENSMUSP00000143516	TRANSLATION	protein_coding	stop	-	1	755	11	0	0	473.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000198285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000197777	ENSMUSP00000143572	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000196329	ENSMUSP00000143084	TRANSLATION	protein_coding	stop	-	1	663	11	0	0	473.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000199808	ENSMUSP00000142481	TRANSLATION	protein_coding	-	CCDS39280.1	1	1391	11	0	2.9	883.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038095	Sbno1	ENSMUST00000197723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000200674	ENSMUSP00000143440	TRANSLATION	nonsense_mediated_decay	start	-	5	242	11	0	0	337.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000065263	ENSMUSP00000066808	TRANSLATION	protein_coding	-	CCDS39280.1	5	1391	11	0	2.9	883.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038095	Sbno1	ENSMUST00000197228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000196711	ENSMUSP00000142980	TRANSLATION	protein_coding	stop	-	5	211	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000196647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000196644	ENSMUSP00000142827	TRANSLATION	protein_coding	stop	-	1	785	11	0	0	473.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000168651	ENSMUSP00000130860	TRANSLATION	protein_coding	stop	-	1	1390	11	0	2.9	883.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038095	Sbno1	ENSMUST00000197974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038095	Sbno1	ENSMUST00000198420	ENSMUSP00000142416	TRANSLATION	protein_coding	stop	-	2	133	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029575	Mmab	ENSMUST00000112245	ENSMUSP00000107864	TRANSLATION	protein_coding	-	CCDS84938.1	3	180	13	4.5	0.5	127.4	0	-4,0	-	-	9.966	MINOR
ENSMUSG00000029575	Mmab	ENSMUST00000123256	ENSMUSP00000142979	TRANSLATION	protein_coding	-	-	1	257	13	5.5	0	178	0	-4,0	-	-	15	MINOR
ENSMUSG00000029575	Mmab	ENSMUST00000031560	ENSMUSP00000031560	TRANSLATION	protein_coding	-	CCDS19565.1	1	237	13	6.25	3.9	203	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000029250	Polr2b	ENSMUST00000138121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029250	Polr2b	ENSMUST00000031167	ENSMUSP00000031167	TRANSLATION	protein_coding	-	CCDS51528.1	1	1174	9	23.83	19.5	1194.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029250	Polr2b	ENSMUST00000132134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029250	Polr2b	ENSMUST00000150191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029090	Adgra3	ENSMUST00000196229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029090	Adgra3	ENSMUST00000199132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029090	Adgra3	ENSMUST00000030971	ENSMUSP00000030971	TRANSLATION	protein_coding	-	CCDS51500.1	1	1310	0	4.88	0.5	157.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029090	Adgra3	ENSMUST00000198868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029090	Adgra3	ENSMUST00000198818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029090	Adgra3	ENSMUST00000196915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029090	Adgra3	ENSMUST00000196177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044339	Alkbh2	ENSMUST00000112279	ENSMUSP00000107898	TRANSLATION	protein_coding	-	CCDS19559.1	1	239	13	3.15	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044339	Alkbh2	ENSMUST00000053657	ENSMUSP00000056043	TRANSLATION	protein_coding	-	CCDS19559.1	1	239	13	3.15	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044339	Alkbh2	ENSMUST00000149418	ENSMUSP00000142877	TRANSLATION	protein_coding	stop	-	2	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042096	Dao	ENSMUST00000199175	ENSMUSP00000143337	TRANSLATION	protein_coding	start	-	3	133	12	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042096	Dao	ENSMUST00000086599	ENSMUSP00000083792	TRANSLATION	protein_coding	-	CCDS71641.1	1	249	29	6.25	0.5	85.7	0	0,-5	-	-	3.678	MINOR
ENSMUSG00000042096	Dao	ENSMUST00000161610	ENSMUSP00000125588	TRANSLATION	protein_coding	-	CCDS19557.1	1	345	38	9.5	8.3	124.4	0	0,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000042096	Dao	ENSMUST00000162214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042096	Dao	ENSMUST00000112292	ENSMUSP00000107911	TRANSLATION	protein_coding	-	CCDS19557.1	1	345	38	9.5	8.3	124.4	0	0,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029198	Grpel1	ENSMUST00000031099	ENSMUSP00000031099	TRANSLATION	protein_coding	-	CCDS19238.1	1	217	0	1.6	5.1	147.9	0	-2,2	-	-	14	PRINCIPAL:1
ENSMUSG00000037736	Limch1	ENSMUST00000202048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037736	Limch1	ENSMUST00000101164	ENSMUSP00000098723	TRANSLATION	protein_coding	-	CCDS39102.1	5	1057	8	3.63	1.5	311.6	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000037736	Limch1	ENSMUST00000201322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037736	Limch1	ENSMUST00000137394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037736	Limch1	ENSMUST00000147050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037736	Limch1	ENSMUST00000117601	ENSMUSP00000113544	TRANSLATION	protein_coding	-	-	5	898	8	1.08	0.5	261.9	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000122812	ENSMUSP00000144176	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000201852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037736	Limch1	ENSMUST00000202830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037736	Limch1	ENSMUST00000135334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037736	Limch1	ENSMUST00000118242	ENSMUSP00000112732	TRANSLATION	protein_coding	-	-	5	1068	8	3.63	1	289.6	0	-4,-6	-	-	16.68	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000130228	ENSMUSP00000116126	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	1.75	0	34.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000127184	ENSMUSP00000114681	TRANSLATION	protein_coding	stop	-	5	237	0	0	0	191.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000140428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037736	Limch1	ENSMUST00000119854	ENSMUSP00000112651	TRANSLATION	protein_coding	start	-	1	774	8	1.08	0	205.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000238785	ENSMUSP00000158661	TRANSLATION	protein_coding	-	-	-	1511	8	3.63	0	301	0	-4,-6	-	-	17.364	ALTERNATIVE:2
ENSMUSG00000037736	Limch1	ENSMUST00000238993	ENSMUSP00000159044	TRANSLATION	protein_coding	-	-	-	927	8	1.08	0	261.9	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000038188	ENSMUSP00000043163	TRANSLATION	protein_coding	-	CCDS57347.1	1	901	8	1.08	1.5	261.9	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000153174	ENSMUSP00000118979	TRANSLATION	nonsense_mediated_decay	start	-	2	60	6	0.88	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037736	Limch1	ENSMUST00000132991	ENSMUSP00000123337	TRANSLATION	protein_coding	stop	-	2	268	0	0	0	230.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000069538	ENSMUSP00000069165	TRANSLATION	protein_coding	-	CCDS19089.1	1	1028	0	0	0.5	0	1	-2,1	-	-	0	PRINCIPAL:2
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000154662	ENSMUSP00000116026	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000131626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000142202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000134991	ENSMUSP00000121757	TRANSLATION	protein_coding	-	-	1	1014	0	0	0	0	1	-2,1	-	-	0	ALTERNATIVE:2
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000152095	ENSMUSP00000116440	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000115348	ENSMUSP00000111005	TRANSLATION	protein_coding	-	-	1	236	0	0	0	0	0	-2,1	-	-	0	ALTERNATIVE:2
ENSMUSG00000056004	9330182L06Rik	ENSMUST00000155764	ENSMUSP00000120849	TRANSLATION	nonsense_mediated_decay	-	-	1	580	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000035851	Ythdc1	ENSMUST00000198167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035851	Ythdc1	ENSMUST00000119339	ENSMUSP00000113000	TRANSLATION	protein_coding	-	CCDS84899.1	5	710	0	4.95	0.5	137.4	0	-4,-5	-	-	11.202	ALTERNATIVE:2
ENSMUSG00000035851	Ythdc1	ENSMUST00000038384	ENSMUSP00000039133	TRANSLATION	protein_coding	-	CCDS39127.1	5	736	0	5.35	0.5	137.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035851	Ythdc1	ENSMUST00000156363	ENSMUSP00000122491	TRANSLATION	nonsense_mediated_decay	-	-	5	545	0	4.95	0	137.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035851	Ythdc1	ENSMUST00000148142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035851	Ythdc1	ENSMUST00000151489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035851	Ythdc1	ENSMUST00000120498	ENSMUSP00000113951	TRANSLATION	protein_coding	-	CCDS84898.1	5	728	0	5.35	0.5	137.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035851	Ythdc1	ENSMUST00000123625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035851	Ythdc1	ENSMUST00000124123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005373	Mlxipl	ENSMUST00000154840	ENSMUSP00000121668	TRANSLATION	protein_coding	start/stop	-	3	181	0	1.1794	0	35.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000153519	ENSMUSP00000122198	TRANSLATION	nonsense_mediated_decay	-	-	1	744	0	4.71	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000123370	ENSMUSP00000116358	TRANSLATION	protein_coding	start	-	2	179	0	1.1794	0	50.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000129008	ENSMUSP00000114933	TRANSLATION	nonsense_mediated_decay	-	-	1	556	0	4.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000005507	ENSMUSP00000005507	TRANSLATION	protein_coding	-	CCDS39316.1	1	864	0	5.3294	1.5	50.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005373	Mlxipl	ENSMUST00000141770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005373	Mlxipl	ENSMUST00000201977	ENSMUSP00000144299	TRANSLATION	protein_coding	stop	-	3	220	0	4.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000128691	ENSMUSP00000121348	TRANSLATION	nonsense_mediated_decay	-	-	1	714	0	4.71	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005373	Mlxipl	ENSMUST00000202431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005373	Mlxipl	ENSMUST00000142385	ENSMUSP00000144328	TRANSLATION	nonsense_mediated_decay	-	-	2	545	0	4.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015879	Fam184b	ENSMUST00000198680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015879	Fam184b	ENSMUST00000016023	ENSMUSP00000016023	TRANSLATION	protein_coding	-	CCDS19276.1	1	942	0	0	0.5	86.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029231	Pdgfra	ENSMUST00000168162	ENSMUSP00000127173	TRANSLATION	protein_coding	-	CCDS19351.1	1	1089	21	16.15	5.1	428.8	2	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000029231	Pdgfra	ENSMUST00000202161	ENSMUSP00000144485	TRANSLATION	protein_coding	stop	-	2	88	0	0.48	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000029231	Pdgfra	ENSMUST00000200822	ENSMUSP00000144634	TRANSLATION	protein_coding	stop	-	5	243	0	3.08	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000029231	Pdgfra	ENSMUST00000202681	ENSMUSP00000143906	TRANSLATION	protein_coding	-	-	1	790	16	10.75	0	175.6	2	1,-2	-	-	2.664	MINOR
ENSMUSG00000029231	Pdgfra	ENSMUST00000202992	ENSMUSP00000144132	TRANSLATION	protein_coding	stop	-	3	139	0	1.48	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000029231	Pdgfra	ENSMUST00000000476	ENSMUSP00000000476	TRANSLATION	protein_coding	-	CCDS19351.1	1	1089	21	16.15	5.1	428.8	2	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000029231	Pdgfra	ENSMUST00000201241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029231	Pdgfra	ENSMUST00000202186	ENSMUSP00000144543	TRANSLATION	non_stop_decay	stop	-	1	481	0	6.21	0	67.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000029231	Pdgfra	ENSMUST00000201711	ENSMUSP00000143891	TRANSLATION	protein_coding	-	-	1	790	16	10.75	0	175.6	2	1,-2	-	-	2.664	MINOR
ENSMUSG00000039000	Ube3c	ENSMUST00000197953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039000	Ube3c	ENSMUST00000199598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039000	Ube3c	ENSMUST00000199032	ENSMUSP00000142474	TRANSLATION	protein_coding	-	-	1	644	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000039000	Ube3c	ENSMUST00000049453	ENSMUSP00000045998	TRANSLATION	protein_coding	-	CCDS39042.1	1	1083	4	5.245	3.9	311.5	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000039000	Ube3c	ENSMUST00000197193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018143	Mafk	ENSMUST00000018287	ENSMUSP00000018287	TRANSLATION	protein_coding	-	CCDS19814.1	1	156	0	1	19.5	117.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000018143	Mafk	ENSMUST00000110836	ENSMUSP00000106460	TRANSLATION	protein_coding	-	CCDS19814.1	5	156	0	1	19.5	117.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000018143	Mafk	ENSMUST00000151577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025532	Crcp	ENSMUST00000201777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025532	Crcp	ENSMUST00000202756	ENSMUSP00000143969	TRANSLATION	protein_coding	-	-	2	97	0	1.32	0	0	0	-4,-5	-	-	3.444	MINOR
ENSMUSG00000025532	Crcp	ENSMUST00000026608	ENSMUSP00000026608	TRANSLATION	protein_coding	-	CCDS19706.1	1	148	0	2.3	9.5	104.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025532	Crcp	ENSMUST00000156729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025532	Crcp	ENSMUST00000202163	ENSMUSP00000144624	TRANSLATION	protein_coding	-	-	2	72	0	0.92	0	22.9	0	-4,-5	-	-	3.48	MINOR
ENSMUSG00000025532	Crcp	ENSMUST00000202691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016503	Gtf3a	ENSMUST00000133682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016503	Gtf3a	ENSMUST00000133296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016503	Gtf3a	ENSMUST00000146511	ENSMUSP00000119607	TRANSLATION	protein_coding	-	-	1	364	31	5.275	1.5	135	0	-4,-6	-	-	18	PRINCIPAL:5
ENSMUSG00000016503	Gtf3a	ENSMUST00000132102	ENSMUSP00000115824	TRANSLATION	protein_coding	-	-	1	342	31	5.275	0	135	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000000560	Gabra2	ENSMUST00000199012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000560	Gabra2	ENSMUST00000198625	ENSMUSP00000143645	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	1.85	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000000560	Gabra2	ENSMUST00000199861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000560	Gabra2	ENSMUST00000000572	ENSMUSP00000000572	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	1.25	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000000560	Gabra2	ENSMUST00000197124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000560	Gabra2	ENSMUST00000197284	ENSMUSP00000142892	TRANSLATION	protein_coding	-	CCDS19327.1	1	451	6	7.17	6.3	276.5	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000066684	Pilrb1	ENSMUST00000110978	ENSMUSP00000106606	TRANSLATION	protein_coding	-	CCDS51675.1	1	224	0	2.55	1.5	0	3	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000066684	Pilrb1	ENSMUST00000197914	ENSMUSP00000142614	TRANSLATION	nonsense_mediated_decay	start	-	2	29	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000066684	Pilrb1	ENSMUST00000196195	ENSMUSP00000143777	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000066684	Pilrb1	ENSMUST00000197403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066684	Pilrb1	ENSMUST00000199387	ENSMUSP00000143379	TRANSLATION	protein_coding	-	-	1	225	0	2.55	1.5	0	3	1,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000066684	Pilrb1	ENSMUST00000198703	ENSMUSP00000142422	TRANSLATION	protein_coding	start	-	3	96	0	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029223	Uchl1	ENSMUST00000177194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029223	Uchl1	ENSMUST00000031131	ENSMUSP00000031131	TRANSLATION	protein_coding	-	CCDS19315.1	1	223	4	5.58	11.6	203.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000029223	Uchl1	ENSMUST00000202339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029223	Uchl1	ENSMUST00000176015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096139	Gm7978	ENSMUST00000178552	ENSMUSP00000137600	TRANSLATION	protein_coding	-	CCDS57365.1	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000096139	Gm7978	ENSMUST00000201129	ENSMUSP00000144093	TRANSLATION	protein_coding	-	CCDS57365.1	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000106379	Lhfpl3	ENSMUST00000196406	ENSMUSP00000142837	TRANSLATION	protein_coding	-	-	1	80	0	0	0	88.2	1	-4,-6	-	-	0	MINOR
ENSMUSG00000106379	Lhfpl3	ENSMUST00000197992	ENSMUSP00000143576	TRANSLATION	protein_coding	-	CCDS80218.1	1	228	0	0	7.6	232.9	3	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029478	Ncor2	ENSMUST00000134404	ENSMUSP00000121588	TRANSLATION	protein_coding	stop	-	5	1025	0	1.425	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000144354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029478	Ncor2	ENSMUST00000111394	ENSMUSP00000107025	TRANSLATION	protein_coding	-	CCDS57382.1	1	2253	4	5.77	0.5	44.2	0	-4,-2	-	-	6.1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000199561	ENSMUSP00000142862	TRANSLATION	protein_coding	stop	-	5	102	0	1.8	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000111398	ENSMUSP00000107029	TRANSLATION	protein_coding	-	-	5	2472	4	7.72	1.5	173.9	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000029478	Ncor2	ENSMUST00000055256	ENSMUSP00000055954	TRANSLATION	protein_coding	-	-	2	2473	4	7.72	0.5	173.9	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000029478	Ncor2	ENSMUST00000086083	ENSMUSP00000083250	TRANSLATION	protein_coding	-	CCDS39285.2	5	2468	4	7.72	0.5	173.9	0	-4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000029478	Ncor2	ENSMUST00000134819	ENSMUSP00000115776	TRANSLATION	protein_coding	start/stop	-	2	214	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000200297	ENSMUSP00000142725	TRANSLATION	nonsense_mediated_decay	start	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000149968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029478	Ncor2	ENSMUST00000111393	ENSMUSP00000107024	TRANSLATION	protein_coding	-	CCDS57381.1	1	2332	4	7.12	0.5	126.7	0	-4,-5	-	-	11.968	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000138890	ENSMUSP00000117813	TRANSLATION	protein_coding	start	-	5	336	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000125053	ENSMUSP00000117098	TRANSLATION	protein_coding	start	-	1	1552	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029478	Ncor2	ENSMUST00000130742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029478	Ncor2	ENSMUST00000111402	ENSMUSP00000107033	TRANSLATION	protein_coding	-	-	5	2507	4	7.72	0.5	173.9	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000029559	2210016L21Rik	ENSMUST00000131427	ENSMUSP00000135781	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029559	2210016L21Rik	ENSMUST00000031538	ENSMUSP00000031538	TRANSLATION	protein_coding	-	CCDS19576.1	1	256	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000029559	2210016L21Rik	ENSMUST00000147743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029559	2210016L21Rik	ENSMUST00000140090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029559	2210016L21Rik	ENSMUST00000131771	ENSMUSP00000114697	TRANSLATION	nonsense_mediated_decay	start	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039682	Lap3	ENSMUST00000131289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039682	Lap3	ENSMUST00000146811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039682	Lap3	ENSMUST00000046122	ENSMUSP00000040222	TRANSLATION	protein_coding	-	CCDS19274.1	1	519	10	11.2	7.5	487	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000039682	Lap3	ENSMUST00000137699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039682	Lap3	ENSMUST00000135413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039682	Lap3	ENSMUST00000198534	ENSMUSP00000142831	TRANSLATION	protein_coding	start/stop	-	5	107	0	2.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029546	Uncx	ENSMUST00000172997	ENSMUSP00000134067	TRANSLATION	protein_coding	-	CCDS19813.1	1	530	0	1	1.5	79.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029546	Uncx	ENSMUST00000174792	ENSMUSP00000139081	TRANSLATION	protein_coding	-	-	1	201	0	1	0	47.8	0	-4,-5	-	-	9.624	MINOR
ENSMUSG00000070464	Ccl26	ENSMUST00000094226	ENSMUSP00000091779	TRANSLATION	protein_coding	-	CCDS19741.1	1	93	0	2	1.5	56.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051596	Otop1	ENSMUST00000185357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051596	Otop1	ENSMUST00000063136	ENSMUSP00000061805	TRANSLATION	protein_coding	-	-	5	596	0	0	0	146.7	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000051596	Otop1	ENSMUST00000187863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051596	Otop1	ENSMUST00000114099	ENSMUSP00000109734	TRANSLATION	protein_coding	-	-	5	600	0	0	0.5	146.7	8	-3,0	-	-	6	PRINCIPAL:5
ENSMUSG00000106631	Gm42669	ENSMUST00000160160	ENSMUSP00000124398	TRANSLATION	protein_coding,RT	-	-	2	138	0	0	0	219	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000106631	Gm42669	ENSMUST00000143074	ENSMUSP00000122032	TRANSLATION	protein_coding,RT	start	-	1	571	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000029484	Anxa3	ENSMUST00000031447	ENSMUSP00000031447	TRANSLATION	protein_coding	-	CCDS51568.1	1	323	21	9.5	11.8	357.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000029484	Anxa3	ENSMUST00000197339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029484	Anxa3	ENSMUST00000197196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029484	Anxa3	ENSMUST00000198631	ENSMUSP00000143491	TRANSLATION	protein_coding	-	-	1	180	8	5.1	0	184.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029484	Anxa3	ENSMUST00000196126	ENSMUSP00000143103	TRANSLATION	protein_coding	-	-	2	32	3	0.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029484	Anxa3	ENSMUST00000199390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029484	Anxa3	ENSMUST00000199330	ENSMUSP00000143615	TRANSLATION	protein_coding	stop	-	3	84	4	2.5	0	84.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029484	Anxa3	ENSMUST00000199656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029484	Anxa3	ENSMUST00000200379	ENSMUSP00000142527	TRANSLATION	protein_coding	stop	-	5	78	4	2.5	0	97.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047221	Fam185a	ENSMUST00000146056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047221	Fam185a	ENSMUST00000056045	ENSMUSP00000058333	TRANSLATION	protein_coding	-	CCDS39022.1	1	378	0	0	0.5	0	0	-3,1	-	-	0	PRINCIPAL:1
ENSMUSG00000047221	Fam185a	ENSMUST00000153301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051940	5031410I06Rik	ENSMUST00000063524	ENSMUSP00000069697	TRANSLATION	protein_coding	-	CCDS51443.1	1	267	0	0	0.5	83.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000095829	Speer1	ENSMUST00000179482	ENSMUSP00000136498	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	80.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095829	Speer1	ENSMUST00000172106	ENSMUSP00000132617	TRANSLATION	protein_coding	-	-	5	157	0	0	0.5	80.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000061259	Tmprss11d	ENSMUST00000122377	ENSMUSP00000113079	TRANSLATION	protein_coding	-	-	1	279	6	4.3	1	228.4	0	0,-4	-	-	7.692	MINOR
ENSMUSG00000061259	Tmprss11d	ENSMUST00000031175	ENSMUSP00000031175	TRANSLATION	protein_coding	-	CCDS39124.1	1	417	6	7.05	2.7	308.5	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015880	Ncapg	ENSMUST00000198274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015880	Ncapg	ENSMUST00000134309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015880	Ncapg	ENSMUST00000129562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015880	Ncapg	ENSMUST00000123396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015880	Ncapg	ENSMUST00000117396	ENSMUSP00000112871	TRANSLATION	protein_coding	-	CCDS51498.1	5	1004	0	0	0.5	278.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000015880	Ncapg	ENSMUST00000134090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000198348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000055128	ENSMUSP00000062110	TRANSLATION	protein_coding	-	CCDS19270.1	5	564	0	0	0.5	361.1	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046985	Tapt1	ENSMUST00000199374	ENSMUSP00000143625	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046985	Tapt1	ENSMUST00000198391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000198388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000196151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000199265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046985	Tapt1	ENSMUST00000197266	ENSMUSP00000143407	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095710	Gm8871	ENSMUST00000168945	ENSMUSP00000132192	TRANSLATION	protein_coding	start	-	5	154	0	0	0.5	78.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095710	Gm8871	ENSMUST00000163544	ENSMUSP00000128435	TRANSLATION	protein_coding	start	-	5	190	0	0	0	78.1	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000029447	Cct6a	ENSMUST00000031402	ENSMUSP00000158738	TRANSLATION	protein_coding	-	-	5	532	23	12.4	0	499.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029447	Cct6a	ENSMUST00000202854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029447	Cct6a	ENSMUST00000201653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029447	Cct6a	ENSMUST00000201414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029447	Cct6a	ENSMUST00000201927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029447	Cct6a	ENSMUST00000202466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029447	Cct6a	ENSMUST00000202262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033623	Pcgf3	ENSMUST00000138264	ENSMUSP00000142465	TRANSLATION	nonsense_mediated_decay	-	-	3	56	4	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033623	Pcgf3	ENSMUST00000143973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033623	Pcgf3	ENSMUST00000151897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033623	Pcgf3	ENSMUST00000046975	ENSMUSP00000041790	TRANSLATION	protein_coding	-	CCDS19512.1	1	241	8	4.55	17	104.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000033623	Pcgf3	ENSMUST00000112597	ENSMUSP00000108216	TRANSLATION	protein_coding	-	-	1	178	8	3	0	44.5	0	-4,-6	-	-	11.31	MINOR
ENSMUSG00000034021	Pds5b	ENSMUST00000202170	ENSMUSP00000144572	TRANSLATION	protein_coding	-	CCDS85012.1	5	1448	0	26.25	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000034021	Pds5b	ENSMUST00000201920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034021	Pds5b	ENSMUST00000133738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034021	Pds5b	ENSMUST00000038900	ENSMUSP00000038421	TRANSLATION	protein_coding	-	-	5	1449	0	26.25	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000034021	Pds5b	ENSMUST00000110486	ENSMUSP00000106112	TRANSLATION	protein_coding	-	-	1	701	0	13.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034021	Pds5b	ENSMUST00000132947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034021	Pds5b	ENSMUST00000016569	ENSMUSP00000016569	TRANSLATION	protein_coding	-	CCDS39412.1	1	1446	0	26.25	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000034021	Pds5b	ENSMUST00000154083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025747	Tyms	ENSMUST00000154751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025747	Tyms	ENSMUST00000026846	ENSMUSP00000026846	TRANSLATION	protein_coding	-	CCDS19154.1	1	307	15	7.91	1.5	394.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025747	Tyms	ENSMUST00000196872	ENSMUSP00000142970	TRANSLATION	protein_coding	stop	-	1	175	14	4.16	0	215.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025747	Tyms	ENSMUST00000141630	ENSMUSP00000123377	TRANSLATION	nonsense_mediated_decay	-	-	1	140	2	1.75	0	78.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025747	Tyms	ENSMUST00000138520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025747	Tyms	ENSMUST00000196095	ENSMUSP00000143552	TRANSLATION	nonsense_mediated_decay	-	-	5	93	2	1.882	0	81	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025747	Tyms	ENSMUST00000198095	ENSMUSP00000143001	TRANSLATION	protein_coding	stop	-	3	139	3	3.58	0	79.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025747	Tyms	ENSMUST00000134298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025747	Tyms	ENSMUST00000146520	ENSMUSP00000143540	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028771	Ptpn12	ENSMUST00000126853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028771	Ptpn12	ENSMUST00000199774	ENSMUSP00000142550	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	1.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028771	Ptpn12	ENSMUST00000140057	ENSMUSP00000117697	TRANSLATION	nonsense_mediated_decay	start	-	5	33	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028771	Ptpn12	ENSMUST00000151366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028771	Ptpn12	ENSMUST00000148711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028771	Ptpn12	ENSMUST00000151813	ENSMUSP00000116989	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	1.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028771	Ptpn12	ENSMUST00000030556	ENSMUSP00000030556	TRANSLATION	protein_coding	-	CCDS19102.1	1	775	12	9.41	0.5	269.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000067367	Lyar	ENSMUST00000154975	ENSMUSP00000118337	TRANSLATION	nonsense_mediated_decay	-	-	2	40	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000130721	ENSMUSP00000122153	TRANSLATION	protein_coding	stop	-	5	190	9	2.33	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000123207	ENSMUSP00000121204	TRANSLATION	protein_coding	stop	-	3	99	9	2.33	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000114106	ENSMUSP00000109741	TRANSLATION	protein_coding	-	CCDS19253.1	5	388	9	2.33	1.5	57.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067367	Lyar	ENSMUST00000202506	ENSMUSP00000144609	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000152066	ENSMUSP00000118035	TRANSLATION	protein_coding	stop	-	3	49	7	1.33	0	34.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000131492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067367	Lyar	ENSMUST00000155300	ENSMUSP00000122486	TRANSLATION	protein_coding	stop	-	5	131	9	2.33	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000132190	ENSMUSP00000121320	TRANSLATION	protein_coding	stop	-	1	191	9	2.33	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067367	Lyar	ENSMUST00000087514	ENSMUSP00000084791	TRANSLATION	protein_coding	-	CCDS19253.1	1	388	9	2.33	1.5	57.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067367	Lyar	ENSMUST00000146401	ENSMUSP00000114506	TRANSLATION	nonsense_mediated_decay	-	-	2	40	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079093	4930449I24Rik	ENSMUST00000110598	ENSMUSP00000106228	TRANSLATION	protein_coding	-	CCDS51701.1	1	319	0	0	0.5	28.6	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000054252	Fgfr3	ENSMUST00000087820	ENSMUSP00000085122	TRANSLATION	protein_coding	-	CCDS51466.1	5	782	20	17.62	0.5	466.3	2	3,-1	-	-	17.112	ALTERNATIVE:2
ENSMUSG00000054252	Fgfr3	ENSMUST00000152661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054252	Fgfr3	ENSMUST00000169212	ENSMUSP00000130856	TRANSLATION	protein_coding	-	CCDS51465.1	1	800	20	17.92	2.7	466.3	2	3,-1	-	-	17.712	PRINCIPAL:4
ENSMUSG00000054252	Fgfr3	ENSMUST00000164207	ENSMUSP00000133064	TRANSLATION	protein_coding	-	CCDS57335.1	1	801	20	17.92	2.7	466.3	2	3,-1	-	-	17.712	ALTERNATIVE:2
ENSMUSG00000054252	Fgfr3	ENSMUST00000134610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054252	Fgfr3	ENSMUST00000067150	ENSMUSP00000070998	TRANSLATION	protein_coding	-	CCDS51465.1	1	800	20	17.92	2.7	466.3	2	3,-1	-	-	17.712	PRINCIPAL:4
ENSMUSG00000054252	Fgfr3	ENSMUST00000114411	ENSMUSP00000110053	TRANSLATION	protein_coding	-	-	5	802	20	17.92	2.7	471.1	2	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000054252	Fgfr3	ENSMUST00000181298	ENSMUSP00000143963	TRANSLATION	protein_coding	start/stop	-	5	200	0	5.58	0	105.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054252	Fgfr3	ENSMUST00000202791	ENSMUSP00000143797	TRANSLATION	protein_coding	start/stop	-	2	260	20	6.08	0	247.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054252	Fgfr3	ENSMUST00000142860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054252	Fgfr3	ENSMUST00000171509	ENSMUSP00000131845	TRANSLATION	protein_coding	-	-	5	802	20	17.92	2.7	471.1	2	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000054252	Fgfr3	ENSMUST00000155002	ENSMUSP00000119941	TRANSLATION	protein_coding	stop	-	3	47	0	1.33	0	30.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054252	Fgfr3	ENSMUST00000132724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054252	Fgfr3	ENSMUST00000201437	ENSMUSP00000144379	TRANSLATION	protein_coding	stop	-	3	194	0	3.26	0	49.7	0	3,-1	-	-	-1	MINOR
ENSMUSG00000054252	Fgfr3	ENSMUST00000202138	ENSMUSP00000143945	TRANSLATION	protein_coding	-	CCDS51466.1	1	782	20	17.62	0.5	466.3	2	3,-1	-	-	17.112	ALTERNATIVE:2
ENSMUSG00000054252	Fgfr3	ENSMUST00000202182	ENSMUSP00000143936	TRANSLATION	protein_coding	start/stop	-	3	216	0	4.01	0	91.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054252	Fgfr3	ENSMUST00000201295	ENSMUSP00000144104	TRANSLATION	protein_coding	start/stop	-	5	222	7	5.08	0	38.6	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000029373	Pf4	ENSMUST00000031320	ENSMUSP00000031320	TRANSLATION	protein_coding	-	CCDS19416.1	1	105	0	1.75	1.5	49.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029373	Pf4	ENSMUST00000202625	ENSMUSP00000143818	TRANSLATION	protein_coding	-	-	2	77	0	1	0	0	0	2,-2	-	-	3.426	MINOR
ENSMUSG00000029373	Pf4	ENSMUST00000201990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029364	Wsb2	ENSMUST00000138071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029364	Wsb2	ENSMUST00000031309	ENSMUSP00000031309	TRANSLATION	protein_coding	-	CCDS19604.1	1	404	0	5.14	6.3	156.8	0	-4,-5	-	-	13.604	PRINCIPAL:2
ENSMUSG00000029364	Wsb2	ENSMUST00000149669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029364	Wsb2	ENSMUST00000111959	ENSMUSP00000107590	TRANSLATION	protein_coding	-	-	1	406	0	5.338	3.4	156.8	0	-4,-5	-	-	12.906	ALTERNATIVE:2
ENSMUSG00000029364	Wsb2	ENSMUST00000125522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029364	Wsb2	ENSMUST00000136895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000201765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000202377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000201834	ENSMUSP00000144408	TRANSLATION	protein_coding	stop	-	3	143	0	3.75	0	39.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029121	Crmp1	ENSMUST00000202652	ENSMUSP00000143895	TRANSLATION	protein_coding	stop	-	3	157	0	4.25	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029121	Crmp1	ENSMUST00000202434	ENSMUSP00000143847	TRANSLATION	protein_coding	stop	-	1	191	0	2.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029121	Crmp1	ENSMUST00000201453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000201315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000200834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029121	Crmp1	ENSMUST00000031004	ENSMUSP00000031004	TRANSLATION	protein_coding	-	CCDS39075.1	1	572	0	13.58	15	114.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000029121	Crmp1	ENSMUST00000114158	ENSMUSP00000109795	TRANSLATION	protein_coding	-	CCDS51481.1	1	686	0	13.08	6.3	114.2	0	-4,-6	-	-	12.514	MINOR
ENSMUSG00000091096	Gm17304	ENSMUST00000167618	ENSMUSP00000132416	TRANSLATION	protein_coding	start/stop	-	5	23	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029368	Alb	ENSMUST00000201737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029368	Alb	ENSMUST00000201356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029368	Alb	ENSMUST00000031314	ENSMUSP00000031314	TRANSLATION	protein_coding	-	CCDS19412.1	1	608	0	12.75	1.5	533.3	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000005672	Kit	ENSMUST00000136002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000151357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000201240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000202167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000148993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000144270	ENSMUSP00000116465	TRANSLATION	protein_coding	-	CCDS80302.1	1	975	21	18.09	0.5	390.6	2	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000005672	Kit	ENSMUST00000143221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005672	Kit	ENSMUST00000005815	ENSMUSP00000005815	TRANSLATION	protein_coding	-	CCDS51525.1	1	979	21	18.09	0.5	390.6	2	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000072822	BC061212	ENSMUST00000094587	ENSMUSP00000092168	TRANSLATION	protein_coding	-	CCDS39162.1	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000029335	Bmp3	ENSMUST00000200388	ENSMUSP00000142907	TRANSLATION	protein_coding	-	CCDS80345.1	1	470	0	0.44	0.5	72	0	3,-1	-	-	3.72	MINOR
ENSMUSG00000029335	Bmp3	ENSMUST00000031278	ENSMUSP00000031278	TRANSLATION	protein_coding	-	CCDS19458.1	1	468	0	1.95	1.5	132.6	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029335	Bmp3	ENSMUST00000197143	ENSMUSP00000142662	TRANSLATION	protein_coding	-	-	2	443	0	0.44	0	72	0	3,-1	-	-	3.72	MINOR
ENSMUSG00000039683	Sdk1	ENSMUST00000129831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039683	Sdk1	ENSMUST00000085774	ENSMUSP00000082928	TRANSLATION	protein_coding	-	CCDS39360.2	1	2193	0	31.38	0.5	839.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039683	Sdk1	ENSMUST00000145908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039683	Sdk1	ENSMUST00000074546	ENSMUSP00000074133	TRANSLATION	protein_coding	-	-	1	1933	0	27.38	0	771.7	0	-4,-5	-	-	1.956	MINOR
ENSMUSG00000025533	Asl	ENSMUST00000162230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025533	Asl	ENSMUST00000161640	ENSMUSP00000124487	TRANSLATION	protein_coding	stop	-	5	262	9	7.25	0	285.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025533	Asl	ENSMUST00000161094	ENSMUSP00000124274	TRANSLATION	protein_coding	-	CCDS51655.1	1	464	17	12.75	7.6	436.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025533	Asl	ENSMUST00000159619	ENSMUSP00000123799	TRANSLATION	protein_coding	-	CCDS51655.1	5	464	17	12.75	7.6	436.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025533	Asl	ENSMUST00000160557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025533	Asl	ENSMUST00000160129	ENSMUSP00000124579	TRANSLATION	protein_coding	-	CCDS51655.1	5	464	17	12.75	7.6	436.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025533	Asl	ENSMUST00000159096	ENSMUSP00000125143	TRANSLATION	protein_coding	start	-	3	267	8	7.335	0	191.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025533	Asl	ENSMUST00000161884	ENSMUSP00000123861	TRANSLATION	protein_coding	stop	-	3	74	1	1	0	23.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029580	Actb	ENSMUST00000163829	ENSMUSP00000132135	TRANSLATION	protein_coding	stop	-	2	108	10	3.08	0	64.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029580	Actb	ENSMUST00000100497	ENSMUSP00000098066	TRANSLATION	protein_coding	-	CCDS19833.1	1	375	24	7.08	21.5	503.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029580	Actb	ENSMUST00000167386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029580	Actb	ENSMUST00000196997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029580	Actb	ENSMUST00000106216	ENSMUSP00000101823	TRANSLATION	protein_coding	stop	-	3	150	7	3.75	0	189.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029580	Actb	ENSMUST00000164765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029580	Actb	ENSMUST00000171419	ENSMUSP00000130611	TRANSLATION	protein_coding	stop	-	1	265	15	5.08	0	329.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029580	Actb	ENSMUST00000167721	ENSMUSP00000127663	TRANSLATION	protein_coding	-	-	5	295	24	5.08	0	340	0	-4,-5	-	-	7.998	MINOR
ENSMUSG00000029580	Actb	ENSMUST00000165629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095789	Nupr1l	ENSMUST00000195766	ENSMUSP00000141660	TRANSLATION	nonsense_mediated_decay	-	-	1	102	0	0	1.5	70	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095789	Nupr1l	ENSMUST00000192787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095789	Nupr1l	ENSMUST00000194521	ENSMUSP00000142125	TRANSLATION	nonsense_mediated_decay	-	-	1	102	0	0	1.5	70	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095789	Nupr1l	ENSMUST00000178355	ENSMUSP00000137364	TRANSLATION	protein_coding	-	CCDS51654.1	-	102	0	0	1.5	70	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000011884	Gltp	ENSMUST00000112214	ENSMUSP00000107833	TRANSLATION	protein_coding	-	-	3	179	5	4.25	0	53.6	0	-4,-5	-	-	9.822	MINOR
ENSMUSG00000011884	Gltp	ENSMUST00000112212	ENSMUSP00000107831	TRANSLATION	protein_coding	-	-	5	190	5	4.58	1.2	114.2	0	-4,-5	-	-	14.166	MINOR
ENSMUSG00000011884	Gltp	ENSMUST00000012028	ENSMUSP00000012028	TRANSLATION	protein_coding	-	CCDS19569.1	1	209	6	5.08	17.5	145.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000028986	Klhl7	ENSMUST00000200116	ENSMUSP00000143000	TRANSLATION	nonsense_mediated_decay	-	-	1	422	0	6.8	0	220.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028986	Klhl7	ENSMUST00000199530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028986	Klhl7	ENSMUST00000030841	ENSMUSP00000030841	TRANSLATION	protein_coding	-	CCDS19114.1	1	586	0	10.3	14.6	345.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000028986	Klhl7	ENSMUST00000163409	ENSMUSP00000129461	TRANSLATION	protein_coding	-	CCDS51432.1	2	473	0	8.2	0.5	295.3	0	-4,-5	-	-	4.8	MINOR
ENSMUSG00000044092	C130050O18Rik	ENSMUST00000164078	ENSMUSP00000131619	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044092	C130050O18Rik	ENSMUST00000052176	ENSMUSP00000055600	TRANSLATION	protein_coding	-	CCDS39352.1	1	356	0	0	0.5	0	5	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000044092	C130050O18Rik	ENSMUST00000163940	ENSMUSP00000127769	TRANSLATION	protein_coding	-	CCDS39352.1	1	356	0	0	0.5	0	5	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000029469	Ift81	ENSMUST00000139590	ENSMUSP00000143167	TRANSLATION	protein_coding	start/stop	-	5	198	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029469	Ift81	ENSMUST00000127220	ENSMUSP00000116467	TRANSLATION	protein_coding	stop	-	5	217	0	2.364	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029469	Ift81	ENSMUST00000135956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029469	Ift81	ENSMUST00000196452	ENSMUSP00000143512	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029469	Ift81	ENSMUST00000139447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029469	Ift81	ENSMUST00000144065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029469	Ift81	ENSMUST00000031426	ENSMUSP00000031426	TRANSLATION	protein_coding	-	CCDS19650.1	1	676	0	2.364	10.6	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000029469	Ift81	ENSMUST00000136024	ENSMUSP00000118614	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029469	Ift81	ENSMUST00000196544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051503	Gm6583	ENSMUST00000051117	ENSMUSP00000049839	TRANSLATION	protein_coding	-	CCDS51615.1	-	469	0	0	0.5	256.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000037411	Serpine1	ENSMUST00000041388	ENSMUSP00000039586	TRANSLATION	protein_coding	-	CCDS19761.1	1	402	0	6.83	1.5	356.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000037411	Serpine1	ENSMUST00000199832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037411	Serpine1	ENSMUST00000077523	ENSMUSP00000076728	TRANSLATION	protein_coding	-	CCDS19761.1	5	402	0	6.83	1.5	356.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000079555	Haus3	ENSMUST00000202290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079555	Haus3	ENSMUST00000201069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079555	Haus3	ENSMUST00000060049	ENSMUSP00000049973	TRANSLATION	protein_coding	-	CCDS19211.1	1	570	0	0	0.5	273.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079555	Haus3	ENSMUST00000202042	ENSMUSP00000144049	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	94.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079555	Haus3	ENSMUST00000201042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079555	Haus3	ENSMUST00000202541	ENSMUSP00000144601	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000185100	ENSMUSP00000138997	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000184120	ENSMUSP00000138861	TRANSLATION	nonsense_mediated_decay	-	-	5	289	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000183525	ENSMUSP00000139339	TRANSLATION	protein_coding	stop	-	2	191	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000183973	ENSMUSP00000139361	TRANSLATION	protein_coding	-	-	5	673	0	2.77	1.2	103	0	-4,-5	-	-	12.078	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000183448	ENSMUSP00000139042	TRANSLATION	nonsense_mediated_decay	-	-	1	273	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000184159	ENSMUSP00000139231	TRANSLATION	nonsense_mediated_decay	-	-	2	410	0	2.77	0	103	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000095017	ENSMUSP00000092627	TRANSLATION	protein_coding	-	CCDS51412.1	1	691	0	2.77	4	103	0	-4,-5	-	-	13.155	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000184888	ENSMUSP00000139164	TRANSLATION	nonsense_mediated_decay	-	-	5	273	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000183347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042508	Dmtf1	ENSMUST00000185193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042508	Dmtf1	ENSMUST00000184903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042508	Dmtf1	ENSMUST00000071921	ENSMUSP00000071815	TRANSLATION	protein_coding	-	CCDS19088.1	1	761	0	2.77	8.8	103	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042508	Dmtf1	ENSMUST00000184370	ENSMUSP00000138935	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000184372	ENSMUSP00000139191	TRANSLATION	protein_coding	stop	-	5	232	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000184620	ENSMUSP00000138816	TRANSLATION	nonsense_mediated_decay	-	-	5	248	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042508	Dmtf1	ENSMUST00000183792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042508	Dmtf1	ENSMUST00000184947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042508	Dmtf1	ENSMUST00000184401	ENSMUSP00000139281	TRANSLATION	nonsense_mediated_decay	-	-	5	273	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029618	Ocm	ENSMUST00000085704	ENSMUSP00000082848	TRANSLATION	protein_coding	-	CCDS51693.1	3	109	11	3.08	19.5	50.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029618	Ocm	ENSMUST00000031622	ENSMUSP00000031622	TRANSLATION	protein_coding	-	CCDS51693.1	5	109	11	3.08	19.5	50.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029618	Ocm	ENSMUST00000110702	ENSMUSP00000106330	TRANSLATION	protein_coding	stop	-	5	60	4	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000198029	ENSMUSP00000142896	TRANSLATION	protein_coding	start	-	1	420	11	6.89	0	196.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000199830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029471	Camkk2	ENSMUST00000199179	ENSMUSP00000142751	TRANSLATION	nonsense_mediated_decay	start	-	5	46	0	0.2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000199599	ENSMUSP00000143730	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000196742	ENSMUSP00000142812	TRANSLATION	protein_coding	-	-	1	216	9	1.93	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000198177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029471	Camkk2	ENSMUST00000197373	ENSMUSP00000142717	TRANSLATION	protein_coding	start	-	1	145	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000200109	ENSMUSP00000143732	TRANSLATION	protein_coding	-	CCDS19655.1	1	541	20	8.82	0.5	216.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029471	Camkk2	ENSMUST00000198257	ENSMUSP00000143162	TRANSLATION	protein_coding	stop	-	5	119	9	2.26	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029471	Camkk2	ENSMUST00000199988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029471	Camkk2	ENSMUST00000111668	ENSMUSP00000107297	TRANSLATION	protein_coding	-	CCDS80395.1	1	588	20	8.82	1.5	216.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000050856	Atp5k	ENSMUST00000049628	ENSMUSP00000051222	TRANSLATION	protein_coding	-	CCDS39204.1	1	71	0	0	19	65.8	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000050856	Atp5k	ENSMUST00000123184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050856	Atp5k	ENSMUST00000118632	ENSMUSP00000113882	TRANSLATION	protein_coding	-	-	1	38	0	0	0	47.6	0	-4,-7	-	-	4.338	MINOR
ENSMUSG00000015944	Castor2	ENSMUST00000140240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015944	Castor2	ENSMUST00000201013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015944	Castor2	ENSMUST00000016088	ENSMUSP00000016088	TRANSLATION	protein_coding	-	CCDS19717.1	1	329	0	8.05	8.5	133	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000009580	Odam	ENSMUST00000113274	ENSMUSP00000108899	TRANSLATION	protein_coding	-	CCDS19394.2	1	273	0	0	0.5	428.2	0	3,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000009580	Odam	ENSMUST00000129757	ENSMUSP00000117898	TRANSLATION	protein_coding	-	CCDS19394.2	5	273	0	0	0.5	428.2	0	3,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000034438	Gbp8	ENSMUST00000198326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034438	Gbp8	ENSMUST00000112718	ENSMUSP00000108338	TRANSLATION	protein_coding	-	CCDS19490.1	1	525	15	4	0.5	674.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034438	Gbp8	ENSMUST00000199483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034438	Gbp8	ENSMUST00000031235	ENSMUSP00000031235	TRANSLATION	protein_coding	-	CCDS19490.1	5	525	15	4	0.5	674.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032850	Rnft2	ENSMUST00000154786	ENSMUSP00000120260	TRANSLATION	protein_coding	stop	-	5	206	0	0	0	0	1	-4,0	-	-	-1	MINOR
ENSMUSG00000032850	Rnft2	ENSMUST00000144213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032850	Rnft2	ENSMUST00000132831	ENSMUSP00000120464	TRANSLATION	protein_coding	start	-	3	69	2	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032850	Rnft2	ENSMUST00000121369	ENSMUSP00000113749	TRANSLATION	protein_coding	-	CCDS51632.1	1	445	8	1.05	5.1	38.2	4	-4,0	-	-	20	ALTERNATIVE:1
ENSMUSG00000032850	Rnft2	ENSMUST00000134281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032850	Rnft2	ENSMUST00000117177	ENSMUSP00000112903	TRANSLATION	protein_coding	-	CCDS19611.2	1	446	8	1.05	3.9	38.2	4	-4,0	-	-	19.414	PRINCIPAL:3
ENSMUSG00000032850	Rnft2	ENSMUST00000133372	ENSMUSP00000116025	TRANSLATION	protein_coding	stop	-	5	58	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040429	Mterf1a	ENSMUST00000117463	ENSMUSP00000113306	TRANSLATION	protein_coding	-	CCDS39003.1	1	379	0	1	0.5	263.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040429	Mterf1a	ENSMUST00000044746	ENSMUSP00000046017	TRANSLATION	protein_coding	-	CCDS39003.1	1	379	0	1	0.5	263.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040429	Mterf1a	ENSMUST00000196417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036928	Stag3	ENSMUST00000160729	ENSMUSP00000124170	TRANSLATION	protein_coding	stop	-	2	199	0	2.65	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036928	Stag3	ENSMUST00000048028	ENSMUSP00000040945	TRANSLATION	protein_coding	-	CCDS39344.1	1	1240	0	22.55	0.5	119.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036928	Stag3	ENSMUST00000161113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036928	Stag3	ENSMUST00000159189	ENSMUSP00000124959	TRANSLATION	nonsense_mediated_decay	start	-	2	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036928	Stag3	ENSMUST00000161691	ENSMUSP00000125290	TRANSLATION	protein_coding	stop	-	3	200	0	2.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036928	Stag3	ENSMUST00000159483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036928	Stag3	ENSMUST00000160849	ENSMUSP00000125376	TRANSLATION	protein_coding	start/stop	-	3	152	0	1.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036928	Stag3	ENSMUST00000161615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036928	Stag3	ENSMUST00000162245	ENSMUSP00000125523	TRANSLATION	protein_coding	-	CCDS39344.1	5	1240	0	22.55	0.5	119.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051306	Usp42	ENSMUST00000155408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051306	Usp42	ENSMUST00000141396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051306	Usp42	ENSMUST00000053287	ENSMUSP00000053955	TRANSLATION	protein_coding	-	CCDS39372.1	5	1324	8	5.81	0.5	157.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051306	Usp42	ENSMUST00000129606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051306	Usp42	ENSMUST00000141225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072722	Gm6588	ENSMUST00000100882	ENSMUSP00000098441	TRANSLATION	protein_coding	-	CCDS51616.1	-	461	0	0	0.5	263.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025745	Hadha	ENSMUST00000196156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025745	Hadha	ENSMUST00000132486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025745	Hadha	ENSMUST00000126081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025745	Hadha	ENSMUST00000199559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025745	Hadha	ENSMUST00000196946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025745	Hadha	ENSMUST00000130358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025745	Hadha	ENSMUST00000156859	ENSMUSP00000120976	TRANSLATION	protein_coding	-	CCDS19155.1	1	763	38	13.9	6.4	433.3	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000025745	Hadha	ENSMUST00000026843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025745	Hadha	ENSMUST00000197491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051339	2900026A02Rik	ENSMUST00000212276	ENSMUSP00000148442	TRANSLATION	protein_coding	-	CCDS84933.1	5	385	0	0	1.5	205.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000051339	2900026A02Rik	ENSMUST00000211733	ENSMUSP00000147419	TRANSLATION	protein_coding	-	-	5	1767	0	0	0.5	205.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000051339	2900026A02Rik	ENSMUST00000050125	ENSMUSP00000058789	TRANSLATION	protein_coding	-	CCDS39217.1	1	308	0	0	1.5	205.3	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000025855	Prkar1b	ENSMUST00000139415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025855	Prkar1b	ENSMUST00000134762	ENSMUSP00000116022	TRANSLATION	protein_coding	stop	-	3	85	0	1.75	0	53.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000147505	ENSMUSP00000116727	TRANSLATION	protein_coding	stop	-	3	116	3	2.83	0	53.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000110890	ENSMUSP00000106515	TRANSLATION	protein_coding	-	CCDS19803.1	1	381	29	9.74	16.3	192.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025855	Prkar1b	ENSMUST00000130180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025855	Prkar1b	ENSMUST00000026973	ENSMUSP00000026973	TRANSLATION	protein_coding	-	CCDS19803.1	1	381	29	9.74	16.3	192.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025855	Prkar1b	ENSMUST00000129851	ENSMUSP00000121093	TRANSLATION	protein_coding	stop	-	2	234	16	6.16	0	116.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000110889	ENSMUSP00000106514	TRANSLATION	protein_coding	-	-	5	257	26	6.58	0	138.7	0	-4,-5	-	-	6.774	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000155833	ENSMUSP00000122693	TRANSLATION	protein_coding	stop	-	3	107	3	2.5	0	53.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000141985	ENSMUSP00000117412	TRANSLATION	protein_coding	stop	-	5	45	1	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025855	Prkar1b	ENSMUST00000148002	ENSMUSP00000123286	TRANSLATION	protein_coding	stop	-	2	251	16	6.66	0	118.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029269	Sult1b1	ENSMUST00000120150	ENSMUSP00000112844	TRANSLATION	protein_coding	-	CCDS19391.1	1	299	20	7	8.8	303.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029269	Sult1b1	ENSMUST00000117455	ENSMUSP00000112679	TRANSLATION	protein_coding	-	CCDS19391.1	5	299	20	7	8.8	303.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029269	Sult1b1	ENSMUST00000031199	ENSMUSP00000031199	TRANSLATION	protein_coding	-	CCDS19391.1	1	299	20	7	8.8	303.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029392	Rilpl1	ENSMUST00000062153	ENSMUSP00000050014	TRANSLATION	protein_coding	-	CCDS19678.1	1	406	0	1.36	2.7	234.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029392	Rilpl1	ENSMUST00000199125	ENSMUSP00000142887	TRANSLATION	protein_coding	start	-	3	196	0	0.8	0	83	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029392	Rilpl1	ENSMUST00000200202	ENSMUSP00000142757	TRANSLATION	nonsense_mediated_decay	start	-	1	97	2	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029392	Rilpl1	ENSMUST00000199766	ENSMUSP00000143250	TRANSLATION	protein_coding	start	-	2	193	0	0.8	0	83	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039244	E130309D02Rik	ENSMUST00000160498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039244	E130309D02Rik	ENSMUST00000162332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039244	E130309D02Rik	ENSMUST00000159406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039244	E130309D02Rik	ENSMUST00000046418	ENSMUSP00000041800	TRANSLATION	protein_coding	-	CCDS19839.1	1	448	0	0	7.5	421.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000063146	Clip2	ENSMUST00000100647	ENSMUSP00000098212	TRANSLATION	protein_coding	-	CCDS39310.1	1	1047	0	5.38	2.7	160.7	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000063146	Clip2	ENSMUST00000202408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063146	Clip2	ENSMUST00000036999	ENSMUSP00000037431	TRANSLATION	protein_coding	-	CCDS39309.1	1	1012	0	5.38	2.7	160.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025856	Pdgfa	ENSMUST00000076095	ENSMUSP00000075463	TRANSLATION	protein_coding	-	CCDS19802.1	1	196	0	4	8.4	179.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000025856	Pdgfa	ENSMUST00000046901	ENSMUSP00000038870	TRANSLATION	protein_coding	-	-	1	211	0	4	5.2	179.6	0	4,-1	-	-	13.704	MINOR
ENSMUSG00000025856	Pdgfa	ENSMUST00000110897	ENSMUSP00000106522	TRANSLATION	protein_coding	-	CCDS19802.1	5	196	0	4	8.4	179.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000025856	Pdgfa	ENSMUST00000132051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025856	Pdgfa	ENSMUST00000144934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025856	Pdgfa	ENSMUST00000124080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025856	Pdgfa	ENSMUST00000110896	ENSMUSP00000106521	TRANSLATION	protein_coding	-	CCDS19802.1	5	196	0	4	8.4	179.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000029169	Dhx15	ENSMUST00000195922	ENSMUSP00000143658	TRANSLATION	protein_coding	stop	-	3	186	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029169	Dhx15	ENSMUST00000198378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029169	Dhx15	ENSMUST00000031061	ENSMUSP00000031061	TRANSLATION	protein_coding	-	CCDS39085.1	1	795	11	13	8.8	239.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029169	Dhx15	ENSMUST00000199321	ENSMUSP00000143069	TRANSLATION	protein_coding	-	CCDS80280.1	1	703	11	11.2	0.5	160.8	0	-4,-5	-	-	9.666	MINOR
ENSMUSG00000029169	Dhx15	ENSMUST00000200186	ENSMUSP00000143381	TRANSLATION	nonsense_mediated_decay	-	-	1	608	11	9.25	0	143.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029169	Dhx15	ENSMUST00000196230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029169	Dhx15	ENSMUST00000199343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029247	Paics	ENSMUST00000031160	ENSMUSP00000031160	TRANSLATION	protein_coding	-	CCDS19367.1	1	425	23	8.58	6.3	318.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029247	Paics	ENSMUST00000141687	ENSMUSP00000117027	TRANSLATION	protein_coding	stop	-	5	83	8	1.66	0	55.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029247	Paics	ENSMUST00000153648	ENSMUSP00000123558	TRANSLATION	nonsense_mediated_decay	-	-	5	103	7	1.33	0	50.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029247	Paics	ENSMUST00000140051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029247	Paics	ENSMUST00000117536	ENSMUSP00000112879	TRANSLATION	protein_coding	-	CCDS19367.1	5	425	23	8.58	6.3	318.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029247	Paics	ENSMUST00000120912	ENSMUSP00000113483	TRANSLATION	protein_coding	-	CCDS19367.1	1	425	23	8.58	6.3	318.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029247	Paics	ENSMUST00000154688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000136752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000127366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000132709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000140067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000145106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000156667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033970	Rfc3	ENSMUST00000038131	ENSMUSP00000039621	TRANSLATION	protein_coding	-	CCDS39413.1	1	356	13	6.49	21.5	30.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000039987	Phtf2	ENSMUST00000153194	ENSMUSP00000120624	TRANSLATION	nonsense_mediated_decay	start	-	1	169	0	0	0	0	4	-1,-4	-	-	-1	MINOR
ENSMUSG00000039987	Phtf2	ENSMUST00000133784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039987	Phtf2	ENSMUST00000140147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039987	Phtf2	ENSMUST00000124431	ENSMUSP00000118028	TRANSLATION	nonsense_mediated_decay	start	-	3	20	0	0	0	0	0	-1,-7	-	-	-1	MINOR
ENSMUSG00000039987	Phtf2	ENSMUST00000156044	ENSMUSP00000120222	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	49.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039987	Phtf2	ENSMUST00000118174	ENSMUSP00000114087	TRANSLATION	protein_coding	-	CCDS51426.1	1	747	0	0	5.1	242.9	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000039987	Phtf2	ENSMUST00000139325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000568	Hnrnpd	ENSMUST00000171640	ENSMUSP00000127833	TRANSLATION	nonsense_mediated_decay	start	-	5	150	0	3.18	0	61.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000172361	ENSMUSP00000132735	TRANSLATION	protein_coding	-	CCDS39182.1	1	355	0	5.444	0.5	178.3	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000000568	Hnrnpd	ENSMUST00000164833	ENSMUSP00000131785	TRANSLATION	nonsense_mediated_decay	start	-	5	131	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000171106	ENSMUSP00000131262	TRANSLATION	nonsense_mediated_decay	start	-	5	216	0	4.944	0	126.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000072750	ENSMUSP00000072533	TRANSLATION	protein_coding	-	CCDS51571.1	3	287	0	4.88	0.5	178.3	0	-4,-5	-	-	10.872	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000170654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000568	Hnrnpd	ENSMUST00000170912	ENSMUSP00000143218	TRANSLATION	protein_coding	stop	-	5	25	0	0.75	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000112939	ENSMUSP00000108561	TRANSLATION	protein_coding	-	CCDS39180.1	5	336	0	4.88	0.5	178.3	0	-4,-5	-	-	10.872	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000019128	ENSMUSP00000019128	TRANSLATION	protein_coding	-	CCDS39181.1	1	306	0	5.444	0.5	178.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000000568	Hnrnpd	ENSMUST00000171786	ENSMUSP00000125984	TRANSLATION	protein_coding	stop	-	5	107	0	2.83	0	65.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000568	Hnrnpd	ENSMUST00000168396	ENSMUSP00000131859	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0.2	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000034953	ENSMUSP00000034953	TRANSLATION	protein_coding	start	-	2	147	7	0	1.3	38.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000137272	ENSMUSP00000120331	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000111091	ENSMUSP00000106720	TRANSLATION	protein_coding	-	CCDS80437.1	5	158	7	0	0.5	38.9	0	-4,-6	-	-	12	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000111090	ENSMUSP00000106719	TRANSLATION	protein_coding	-	-	2	147	7	0	0	38.9	0	-4,-2	-	-	12	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000156963	ENSMUSP00000115929	TRANSLATION	protein_coding	-	CCDS39329.1	1	153	7	0	1.5	38.9	0	-4,-2	-	-	12.147	MINOR
ENSMUSG00000059518	Znhit1	ENSMUST00000085941	ENSMUSP00000083103	TRANSLATION	protein_coding	-	CCDS80438.1	1	154	7	0	11.3	38.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029171	Pgm2	ENSMUST00000087324	ENSMUSP00000084582	TRANSLATION	protein_coding	-	CCDS19300.1	1	620	16	4.91	1.5	248.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029171	Pgm2	ENSMUST00000197577	ENSMUSP00000143375	TRANSLATION	protein_coding	start	-	3	33	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029171	Pgm2	ENSMUST00000129152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029171	Pgm2	ENSMUST00000199093	ENSMUSP00000143020	TRANSLATION	nonsense_mediated_decay	start	-	5	76	3	0.95	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029445	Hpd	ENSMUST00000144679	ENSMUSP00000118702	TRANSLATION	protein_coding	start	-	3	96	1	2.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029445	Hpd	ENSMUST00000155092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029445	Hpd	ENSMUST00000031398	ENSMUSP00000031398	TRANSLATION	protein_coding	-	CCDS39265.1	1	393	3	10.99	9.5	100.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029445	Hpd	ENSMUST00000124110	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029445	Hpd	ENSMUST00000156539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029445	Hpd	ENSMUST00000154713	ENSMUSP00000121922	TRANSLATION	protein_coding	stop	-	3	159	1	4.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029420	Rimbp2	ENSMUST00000198941	ENSMUSP00000142455	TRANSLATION	protein_coding	-	CCDS39288.1	2	1079	0	8.7	1.5	119.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029420	Rimbp2	ENSMUST00000196085	ENSMUSP00000143725	TRANSLATION	protein_coding	-	-	5	1004	0	8.7	0	119.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029420	Rimbp2	ENSMUST00000196569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029420	Rimbp2	ENSMUST00000199737	ENSMUSP00000142712	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029420	Rimbp2	ENSMUST00000199537	ENSMUSP00000143276	TRANSLATION	protein_coding	-	-	1	1069	0	8.7	0	119.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029420	Rimbp2	ENSMUST00000200470	ENSMUSP00000143099	TRANSLATION	protein_coding	-	CCDS80415.1	1	1071	0	8.7	1.5	119.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029420	Rimbp2	ENSMUST00000239036	ENSMUSP00000159134	TRANSLATION	protein_coding	start	-	-	76	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029420	Rimbp2	ENSMUST00000238334	ENSMUSP00000158659	TRANSLATION	protein_coding	-	-	-	1291	0	8.7	0	119.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029420	Rimbp2	ENSMUST00000111346	ENSMUSP00000106978	TRANSLATION	protein_coding	-	CCDS39288.1	5	1079	0	8.7	1.5	119.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029229	Chic2	ENSMUST00000162397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029229	Chic2	ENSMUST00000075452	ENSMUSP00000074903	TRANSLATION	protein_coding	-	CCDS19349.1	1	165	0	0	11.8	40.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000028973	Abcb8	ENSMUST00000127816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028973	Abcb8	ENSMUST00000136414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028973	Abcb8	ENSMUST00000115077	ENSMUSP00000110729	TRANSLATION	protein_coding	-	CCDS19118.1	5	717	12	11.578	1.5	298.7	2	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028973	Abcb8	ENSMUST00000073076	ENSMUSP00000072826	TRANSLATION	protein_coding	-	CCDS19118.1	1	717	12	11.578	1.5	298.7	2	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000028973	Abcb8	ENSMUST00000198166	ENSMUSP00000143193	TRANSLATION	protein_coding	start	-	5	60	0	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028973	Abcb8	ENSMUST00000115074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028973	Abcb8	ENSMUST00000151535	ENSMUSP00000114767	TRANSLATION	protein_coding	start	-	1	131	9	3	0	65.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000028973	Abcb8	ENSMUST00000136459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028973	Abcb8	ENSMUST00000138168	ENSMUSP00000119791	TRANSLATION	protein_coding	stop	-	3	135	0	0.4	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034219	Septin14	ENSMUST00000182381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034219	Septin14	ENSMUST00000042266	ENSMUSP00000044272	TRANSLATION	protein_coding	-	-	5	430	16	7.8	2.7	318.9	0	-4,-5	-	-	17.748	ALTERNATIVE:2
ENSMUSG00000034219	Septin14	ENSMUST00000182386	ENSMUSP00000138729	TRANSLATION	protein_coding	-	CCDS59685.1	5	429	16	7.8	2.7	323.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000070493	Chchd2	ENSMUST00000094280	ENSMUSP00000091835	TRANSLATION	protein_coding	-	CCDS19702.1	1	153	0	0	7.5	0	0	-3,1	-	-	3	PRINCIPAL:1
ENSMUSG00000070493	Chchd2	ENSMUST00000131645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066894	Vsig10	ENSMUST00000111967	ENSMUSP00000107598	TRANSLATION	protein_coding	-	CCDS19603.2	5	558	0	2.58	0.5	77.6	0	2,1	-	-	12	PRINCIPAL:2
ENSMUSG00000066894	Vsig10	ENSMUST00000145052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066894	Vsig10	ENSMUST00000139026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066894	Vsig10	ENSMUST00000147182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066894	Vsig10	ENSMUST00000128524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066894	Vsig10	ENSMUST00000086464	ENSMUSP00000083655	TRANSLATION	protein_coding	-	-	5	531	0	2.43	0	77.6	0	2,-2	-	-	11.652	ALTERNATIVE:2
ENSMUSG00000029405	G3bp2	ENSMUST00000201820	ENSMUSP00000144404	TRANSLATION	protein_coding	stop	-	3	117	0	2.75	0	97	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029405	G3bp2	ENSMUST00000169094	ENSMUSP00000128244	TRANSLATION	protein_coding	-	CCDS19427.1	1	482	0	6.47	14.8	167.8	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000029405	G3bp2	ENSMUST00000167918	ENSMUSP00000132469	TRANSLATION	protein_coding	-	CCDS39149.1	1	449	0	6.47	12.8	167.8	0	-4,-6	-	-	15.42	ALTERNATIVE:1
ENSMUSG00000029405	G3bp2	ENSMUST00000202125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029405	G3bp2	ENSMUST00000202258	ENSMUSP00000144456	TRANSLATION	protein_coding	-	CCDS19427.1	1	482	0	6.47	14.8	167.8	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000029405	G3bp2	ENSMUST00000202352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029405	G3bp2	ENSMUST00000201824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029405	G3bp2	ENSMUST00000164378	ENSMUSP00000128353	TRANSLATION	protein_coding	-	CCDS19427.1	1	482	0	6.47	14.8	167.8	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000029405	G3bp2	ENSMUST00000113127	ENSMUSP00000108752	TRANSLATION	protein_coding	-	CCDS39149.1	1	449	0	6.47	12.8	167.8	0	-4,-6	-	-	15.42	ALTERNATIVE:1
ENSMUSG00000029405	G3bp2	ENSMUST00000202123	ENSMUSP00000143804	TRANSLATION	protein_coding	stop	-	1	133	0	3.25	0	117.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023284	Zfp605	ENSMUST00000086686	ENSMUSP00000083891	TRANSLATION	protein_coding	-	CCDS51605.1	3	694	58	1.2	0.5	287.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023284	Zfp605	ENSMUST00000147631	ENSMUSP00000122236	TRANSLATION	protein_coding	stop	-	3	133	2	0.8	0	78.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023284	Zfp605	ENSMUST00000112528	ENSMUSP00000108147	TRANSLATION	protein_coding	-	CCDS51605.1	1	694	58	1.2	0.5	287.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023284	Zfp605	ENSMUST00000144089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029178	Klf3	ENSMUST00000166409	ENSMUSP00000128429	TRANSLATION	protein_coding	-	CCDS19301.1	1	344	12	2	7.5	74.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029178	Klf3	ENSMUST00000200677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029178	Klf3	ENSMUST00000200384	ENSMUSP00000142668	TRANSLATION	nonsense_mediated_decay	start	-	1	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029178	Klf3	ENSMUST00000198946	ENSMUSP00000142651	TRANSLATION	protein_coding	start	-	3	138	12	2	0	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029178	Klf3	ENSMUST00000200587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029178	Klf3	ENSMUST00000197879	ENSMUSP00000142369	TRANSLATION	protein_coding	stop	-	2	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029178	Klf3	ENSMUST00000165536	ENSMUSP00000129363	TRANSLATION	protein_coding	-	CCDS19301.1	1	344	12	2	7.5	74.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029178	Klf3	ENSMUST00000197869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029178	Klf3	ENSMUST00000196764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073234	Gm8773	ENSMUST00000101627	ENSMUSP00000147824	TRANSLATION	protein_coding	-	-	1	132	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000034842	Art3	ENSMUST00000135528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034842	Art3	ENSMUST00000138687	ENSMUSP00000118746	TRANSLATION	protein_coding	stop	-	3	65	0	0.8	0	28.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000119587	ENSMUSP00000112648	TRANSLATION	protein_coding	-	CCDS84904.1	1	350	0	3.214	0.5	211.2	1	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000120781	ENSMUSP00000113008	TRANSLATION	protein_coding	stop	-	5	215	0	2.164	0	180.1	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000145072	ENSMUSP00000116218	TRANSLATION	protein_coding	stop	-	2	108	0	1.4	0	75.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000129222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034842	Art3	ENSMUST00000117108	ENSMUSP00000113041	TRANSLATION	protein_coding	-	-	5	383	0	3.214	0	211.2	1	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000120193	ENSMUSP00000113074	TRANSLATION	protein_coding	-	-	1	365	0	3.214	0	211.2	0	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000120416	ENSMUSP00000113493	TRANSLATION	protein_coding	-	-	1	408	0	3.214	0	211.2	0	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000125462	ENSMUSP00000117995	TRANSLATION	protein_coding	stop	-	1	244	0	2.914	0	206	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000154245	ENSMUSP00000119283	TRANSLATION	protein_coding	stop	-	1	178	0	1.58	0	144.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000113083	ENSMUSP00000108706	TRANSLATION	protein_coding	-	CCDS51546.1	5	361	0	3.214	0.5	211.2	1	1,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000034842	Art3	ENSMUST00000126281	ENSMUSP00000116110	TRANSLATION	protein_coding	start	-	3	310	0	2.414	0	169.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000138003	ENSMUSP00000123571	TRANSLATION	protein_coding	start	-	2	142	0	1.05	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000124509	ENSMUSP00000119113	TRANSLATION	protein_coding	stop	-	2	192	0	1.86	0	160.4	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000121096	ENSMUSP00000113510	TRANSLATION	protein_coding	-	CCDS80328.1	1	373	0	3.214	0.5	211.2	1	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000118106	ENSMUSP00000114083	TRANSLATION	protein_coding	-	-	1	375	0	3.214	0	211.2	0	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034842	Art3	ENSMUST00000128246	ENSMUSP00000121620	TRANSLATION	protein_coding	stop	-	1	206	0	1.9	0	169.2	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034842	Art3	ENSMUST00000152041	ENSMUSP00000114826	TRANSLATION	protein_coding	start	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033467	Crlf2	ENSMUST00000044579	ENSMUSP00000036326	TRANSLATION	protein_coding	-	CCDS19521.1	1	359	0	4.9	0.5	0	1	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000033467	Crlf2	ENSMUST00000200284	ENSMUSP00000143641	TRANSLATION	protein_coding	-	CCDS80356.1	1	357	0	4.45	0.5	0	1	-4,-5	-	-	5.1	ALTERNATIVE:2
ENSMUSG00000033467	Crlf2	ENSMUST00000198960	ENSMUSP00000142982	TRANSLATION	protein_coding	start	-	3	226	0	1.7	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029464	Gpn3	ENSMUST00000151173	ENSMUSP00000116560	TRANSLATION	protein_coding	start	-	3	106	3	0.12	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029464	Gpn3	ENSMUST00000127608	ENSMUSP00000143405	TRANSLATION	nonsense_mediated_decay	-	-	2	189	12	2.84	0	263.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029464	Gpn3	ENSMUST00000146698	ENSMUSP00000120204	TRANSLATION	nonsense_mediated_decay	start	-	3	32	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029464	Gpn3	ENSMUST00000156978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029464	Gpn3	ENSMUST00000123537	ENSMUSP00000120667	TRANSLATION	nonsense_mediated_decay	start	-	5	113	1	1.06	0	143.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029464	Gpn3	ENSMUST00000031420	ENSMUSP00000031420	TRANSLATION	protein_coding	-	CCDS19647.1	1	284	15	2.96	16.1	309.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000009013	Dynll1	ENSMUST00000125959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009013	Dynll1	ENSMUST00000009157	ENSMUSP00000009157	TRANSLATION	protein_coding	-	CCDS39227.1	1	89	0	2	21.5	146.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009013	Dynll1	ENSMUST00000202980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009013	Dynll1	ENSMUST00000112090	ENSMUSP00000107720	TRANSLATION	protein_coding	-	CCDS39227.1	2	89	0	2	21.5	146.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009013	Dynll1	ENSMUST00000127552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009013	Dynll1	ENSMUST00000123292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039106	Htr5a	ENSMUST00000036227	ENSMUSP00000038884	TRANSLATION	protein_coding	-	CCDS19141.1	1	357	0	1.06	4	234.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000049686	Orai1	ENSMUST00000051016	ENSMUSP00000058169	TRANSLATION	protein_coding	-	CCDS39261.1	1	304	0	1.1	0.5	236.7	3	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049686	Orai1	ENSMUST00000121652	ENSMUSP00000113097	TRANSLATION	protein_coding	-	CCDS39261.1	1	304	0	1.1	0.5	236.7	3	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049686	Orai1	ENSMUST00000152213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037053	Azgp1	ENSMUST00000197571	ENSMUSP00000142385	TRANSLATION	nonsense_mediated_decay	-	-	2	56	0	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000037053	Azgp1	ENSMUST00000199145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037053	Azgp1	ENSMUST00000035390	ENSMUSP00000038559	TRANSLATION	protein_coding	-	CCDS19783.1	1	307	0	4.3	0.5	230.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002486	Tchp	ENSMUST00000202105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002486	Tchp	ENSMUST00000152999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002486	Tchp	ENSMUST00000094441	ENSMUSP00000092009	TRANSLATION	protein_coding	-	CCDS51624.1	1	497	0	0	2.9	110.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000002486	Tchp	ENSMUST00000112199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002486	Tchp	ENSMUST00000202252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002486	Tchp	ENSMUST00000124242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002486	Tchp	ENSMUST00000128625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002486	Tchp	ENSMUST00000131679	ENSMUSP00000119890	TRANSLATION	protein_coding	start/stop	-	3	215	0	0	0	35.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054520	Sh3bp2	ENSMUST00000125817	ENSMUSP00000123177	TRANSLATION	protein_coding	stop	-	2	45	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054520	Sh3bp2	ENSMUST00000202745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054520	Sh3bp2	ENSMUST00000179943	ENSMUSP00000136671	TRANSLATION	protein_coding	-	CCDS19215.1	1	559	12	5.17	1.5	98.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000054520	Sh3bp2	ENSMUST00000118545	ENSMUSP00000112554	TRANSLATION	protein_coding	-	CCDS51470.1	1	615	12	5.17	1.5	98.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000054520	Sh3bp2	ENSMUST00000101316	ENSMUSP00000098874	TRANSLATION	protein_coding	-	CCDS51469.1	1	603	12	5.17	1.5	98.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000054520	Sh3bp2	ENSMUST00000153750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054520	Sh3bp2	ENSMUST00000067638	ENSMUSP00000070890	TRANSLATION	protein_coding	-	CCDS19215.1	1	559	12	5.17	1.5	98.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000054520	Sh3bp2	ENSMUST00000138912	ENSMUSP00000114416	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029577	Ube3b	ENSMUST00000130169	ENSMUSP00000138723	TRANSLATION	nonsense_mediated_decay	-	-	1	243	0	0	0	24.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029577	Ube3b	ENSMUST00000074002	ENSMUSP00000073652	TRANSLATION	protein_coding	-	CCDS19564.1	1	1070	4	6.83	1.5	334.6	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000029577	Ube3b	ENSMUST00000150630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029577	Ube3b	ENSMUST00000196651	ENSMUSP00000143455	TRANSLATION	nonsense_mediated_decay	start	-	5	178	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029577	Ube3b	ENSMUST00000151809	ENSMUSP00000142943	TRANSLATION	nonsense_mediated_decay	-	-	3	63	0	0	0	24.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029655	N4bp2l2	ENSMUST00000156180	ENSMUSP00000118475	TRANSLATION	protein_coding	start	-	2	138	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029655	N4bp2l2	ENSMUST00000118316	ENSMUSP00000113895	TRANSLATION	protein_coding	-	CCDS19888.2	5	575	11	0	1.5	56.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029655	N4bp2l2	ENSMUST00000141857	ENSMUSP00000121091	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029655	N4bp2l2	ENSMUST00000145822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029655	N4bp2l2	ENSMUST00000201384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029655	N4bp2l2	ENSMUST00000164332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029655	N4bp2l2	ENSMUST00000201390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029655	N4bp2l2	ENSMUST00000144378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029282	Amtn	ENSMUST00000073363	ENSMUSP00000073081	TRANSLATION	protein_coding	-	CCDS51538.1	1	213	0	0	1.5	309.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029381	Shroom3	ENSMUST00000168878	ENSMUSP00000130419	TRANSLATION	protein_coding	-	-	1	1849	0	4	0	402.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029381	Shroom3	ENSMUST00000172849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029381	Shroom3	ENSMUST00000172706	ENSMUSP00000133690	TRANSLATION	protein_coding	stop	-	2	179	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029381	Shroom3	ENSMUST00000172752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029381	Shroom3	ENSMUST00000202767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029381	Shroom3	ENSMUST00000113051	ENSMUSP00000108674	TRANSLATION	protein_coding	-	CCDS39155.1	1	1805	0	2	0.5	550.6	0	-4,-7	-	-	5.844	MINOR
ENSMUSG00000029381	Shroom3	ENSMUST00000201800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029381	Shroom3	ENSMUST00000225438	ENSMUSP00000153516	TRANSLATION	protein_coding	-	-	-	1899	0	2	0.5	550.6	0	-4,-1	-	-	5.844	MINOR
ENSMUSG00000029381	Shroom3	ENSMUST00000113054	ENSMUSP00000108677	TRANSLATION	protein_coding	-	CCDS39155.1	1	1805	0	2	0.5	550.6	0	-4,-7	-	-	5.844	MINOR
ENSMUSG00000029381	Shroom3	ENSMUST00000113055	ENSMUSP00000108678	TRANSLATION	protein_coding	-	CCDS39154.1	1	1980	0	4	0.5	586.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029381	Shroom3	ENSMUST00000200869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029388	Eif2b1	ENSMUST00000135361	ENSMUSP00000122923	TRANSLATION	protein_coding	stop	-	2	185	0	4.53	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029388	Eif2b1	ENSMUST00000152716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029388	Eif2b1	ENSMUST00000128920	ENSMUSP00000118760	TRANSLATION	protein_coding	stop	-	3	133	0	2.75	0	37.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029388	Eif2b1	ENSMUST00000198318	ENSMUSP00000142748	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029388	Eif2b1	ENSMUST00000031334	ENSMUSP00000031334	TRANSLATION	protein_coding	-	CCDS39282.1	1	305	0	7.58	17.3	263.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029388	Eif2b1	ENSMUST00000135163	ENSMUSP00000120745	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066551	Hmgb1	ENSMUST00000155086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066551	Hmgb1	ENSMUST00000093196	ENSMUSP00000106131	TRANSLATION	protein_coding	-	CCDS19883.1	1	215	0	4.88	7.5	193.9	0	-4,-6	-	-	14.868	PRINCIPAL:1
ENSMUSG00000066551	Hmgb1	ENSMUST00000085546	ENSMUSP00000082682	TRANSLATION	protein_coding	-	CCDS19883.1	1	215	0	4.88	7.5	193.9	0	-4,-6	-	-	14.868	PRINCIPAL:1
ENSMUSG00000066551	Hmgb1	ENSMUST00000133667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066551	Hmgb1	ENSMUST00000125605	ENSMUSP00000114515	TRANSLATION	protein_coding	stop	-	5	92	0	2	0	99	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066551	Hmgb1	ENSMUST00000123645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066551	Hmgb1	ENSMUST00000202133	ENSMUSP00000144412	TRANSLATION	protein_coding	stop	-	3	211	0	4.946	0	193.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066551	Hmgb1	ENSMUST00000139443	ENSMUSP00000144129	TRANSLATION	protein_coding	-	-	2	171	0	4.38	0	188.2	0	-4,-6	-	-	10.524	MINOR
ENSMUSG00000066551	Hmgb1	ENSMUST00000138553	ENSMUSP00000118733	TRANSLATION	protein_coding	stop	-	2	124	0	3.08	0	135.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066551	Hmgb1	ENSMUST00000110505	ENSMUSP00000106132	TRANSLATION	protein_coding	-	CCDS19883.1	1	215	0	4.88	7.5	193.9	0	-4,-6	-	-	14.868	PRINCIPAL:1
ENSMUSG00000048271	Rbm33	ENSMUST00000133313	ENSMUSP00000122901	TRANSLATION	protein_coding	start	-	5	65	0	0	0	20.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048271	Rbm33	ENSMUST00000144967	ENSMUSP00000121879	TRANSLATION	protein_coding	start	-	3	383	0	0	0	20.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048271	Rbm33	ENSMUST00000030920	ENSMUSP00000030920	TRANSLATION	protein_coding	-	-	1	320	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048271	Rbm33	ENSMUST00000059644	ENSMUSP00000062449	TRANSLATION	protein_coding	-	CCDS51448.1	5	1231	0	0	0.5	20.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000048271	Rbm33	ENSMUST00000114884	ENSMUSP00000110534	TRANSLATION	protein_coding	-	-	5	1191	0	0	0.5	20.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048271	Rbm33	ENSMUST00000090355	ENSMUSP00000091512	TRANSLATION	non_stop_decay	stop	-	5	261	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005514	Por	ENSMUST00000122113	ENSMUSP00000112924	TRANSLATION	protein_coding	-	-	2	649	41	11.58	0	452.7	1	-4,-6	-	-	6.444	MINOR
ENSMUSG00000005514	Por	ENSMUST00000150058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005514	Por	ENSMUST00000127096	ENSMUSP00000119138	TRANSLATION	protein_coding	start/stop	-	5	168	6	1.5	0	26.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005514	Por	ENSMUST00000153515	ENSMUSP00000121022	TRANSLATION	protein_coding	stop	-	3	219	18	3.83	0	135.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000005514	Por	ENSMUST00000005651	ENSMUSP00000005651	TRANSLATION	protein_coding	-	CCDS39318.1	1	678	50	13.58	7.5	478.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000005514	Por	ENSMUST00000153500	ENSMUSP00000121531	TRANSLATION	protein_coding	stop	-	3	273	18	5.58	0	135.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000005514	Por	ENSMUST00000132084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005514	Por	ENSMUST00000149684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005514	Por	ENSMUST00000147515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048450	Msx1	ENSMUST00000063116	ENSMUSP00000058354	TRANSLATION	protein_coding	-	CCDS19249.1	1	303	0	0.8	4.1	74.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000048450	Msx1	ENSMUST00000183013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044681	Cnpy1	ENSMUST00000118882	ENSMUSP00000113944	TRANSLATION	protein_coding	-	CCDS80237.1	1	94	0	0	5.3	43.5	0	-4,-5	-	-	4.478	MINOR
ENSMUSG00000044681	Cnpy1	ENSMUST00000141196	ENSMUSP00000116024	TRANSLATION	protein_coding	stop	-	5	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044681	Cnpy1	ENSMUST00000141601	ENSMUSP00000122171	TRANSLATION	protein_coding	-	-	1	145	0	0	2.4	102.2	0	-4,-5	-	-	6.652	PRINCIPAL:1
ENSMUSG00000044681	Cnpy1	ENSMUST00000117098	ENSMUSP00000113956	TRANSLATION	protein_coding	-	-	1	173	0	0	0	38	1	-4,-5	-	-	2.148	MINOR
ENSMUSG00000044681	Cnpy1	ENSMUST00000120068	ENSMUSP00000112773	TRANSLATION	protein_coding	-	-	1	173	0	0	0	38	1	-4,-5	-	-	2.148	MINOR
ENSMUSG00000032690	Oas2	ENSMUST00000146101	ENSMUSP00000122053	TRANSLATION	protein_coding	start	-	1	236	7	3.8	0	287.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032690	Oas2	ENSMUST00000081491	ENSMUSP00000080209	TRANSLATION	protein_coding	-	CCDS84949.1	1	751	12	5.6	0.5	569.8	0	-4,-7	-	-	17.52	ALTERNATIVE:2
ENSMUSG00000032690	Oas2	ENSMUST00000147941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032690	Oas2	ENSMUST00000053909	ENSMUSP00000060082	TRANSLATION	protein_coding	-	CCDS19625.2	1	742	12	5.84	0.5	565.8	0	-4,-7	-	-	17.76	PRINCIPAL:3
ENSMUSG00000048520	Fbxl13	ENSMUST00000115234	ENSMUSP00000110889	TRANSLATION	protein_coding	-	-	5	632	0	4.94	1	48.9	0	-4,-2	-	-	8.622	MINOR
ENSMUSG00000048520	Fbxl13	ENSMUST00000137788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048520	Fbxl13	ENSMUST00000153598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048520	Fbxl13	ENSMUST00000200168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048520	Fbxl13	ENSMUST00000051358	ENSMUSP00000052716	TRANSLATION	protein_coding	-	CCDS51429.1	1	790	0	5.735	0.5	69.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000004846	Plod3	ENSMUST00000004968	ENSMUSP00000004968	TRANSLATION	protein_coding	-	CCDS19759.1	1	741	3	0	1.5	24.6	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000004846	Plod3	ENSMUST00000137419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004846	Plod3	ENSMUST00000144784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004846	Plod3	ENSMUST00000151642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004846	Plod3	ENSMUST00000127100	ENSMUSP00000123550	TRANSLATION	protein_coding	start/stop	-	1	200	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004846	Plod3	ENSMUST00000129896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029361	Nos1	ENSMUST00000138579	ENSMUSP00000138176	TRANSLATION	protein_coding	stop	-	2	80	0	1	0	54.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029361	Nos1	ENSMUST00000142742	ENSMUSP00000120421	TRANSLATION	protein_coding	-	CCDS19606.1	5	1429	81	24.85	1.5	1245.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000029361	Nos1	ENSMUST00000086451	ENSMUSP00000138506	TRANSLATION	nonsense_mediated_decay	-	-	1	1425	81	24.85	1.5	1245.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029361	Nos1	ENSMUST00000102557	ENSMUSP00000099617	TRANSLATION	protein_coding	-	-	5	1463	81	24.35	1.5	1243.5	0	-4,-5	-	-	16.902	ALTERNATIVE:2
ENSMUSG00000029361	Nos1	ENSMUST00000138554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029361	Nos1	ENSMUST00000124194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029361	Nos1	ENSMUST00000171055	ENSMUSP00000127432	TRANSLATION	protein_coding	-	CCDS19606.1	1	1429	81	24.85	1.5	1245.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054675	Tmem119	ENSMUST00000067853	ENSMUSP00000070551	TRANSLATION	protein_coding	-	CCDS19554.1	1	280	0	0	1.5	434.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000054675	Tmem119	ENSMUST00000160374	ENSMUSP00000124226	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000042453	Reln	ENSMUST00000161356	ENSMUSP00000124052	TRANSLATION	protein_coding	-	CCDS39023.1	5	3461	36	20.67	5.3	30.4	0	3,-3	-	-	20	PRINCIPAL:3
ENSMUSG00000042453	Reln	ENSMUST00000162637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000162427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000159741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000199034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000161353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000200667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042453	Reln	ENSMUST00000160791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042453	Reln	ENSMUST00000062372	ENSMUSP00000058025	TRANSLATION	protein_coding	-	CCDS80217.1	5	3459	36	20.67	5.3	30.4	0	3,-3	-	-	20	ALTERNATIVE:1
ENSMUSG00000042453	Reln	ENSMUST00000159768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000200318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000162622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000160707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042453	Reln	ENSMUST00000161782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042453	Reln	ENSMUST00000162876	ENSMUSP00000124077	TRANSLATION	nonsense_mediated_decay	start	-	3	47	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048703	Speer4b	ENSMUST00000155721	ENSMUSP00000122872	TRANSLATION	protein_coding	start	-	5	217	0	0	0	87.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048703	Speer4b	ENSMUST00000124535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048703	Speer4b	ENSMUST00000053257	ENSMUSP00000062903	TRANSLATION	protein_coding	-	CCDS19140.1	1	267	0	0	0.5	87.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079091	Gm3404	ENSMUST00000110596	ENSMUSP00000106226	TRANSLATION	protein_coding	-	CCDS57404.1	1	307	0	0	0.5	28.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000079278	Tmem233	ENSMUST00000239438	ENSMUSP00000159360	TRANSLATION	protein_coding	-	CCDS51629.1	-	135	0	0	1.5	73.6	2	-4,-2	-	-	6.177	MINOR
ENSMUSG00000079278	Tmem233	ENSMUST00000111997	ENSMUSP00000107628	TRANSLATION	protein_coding	-	-	2	110	0	0	9.5	73.6	2	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000095074	Gm3139	ENSMUST00000178330	ENSMUSP00000137485	TRANSLATION	protein_coding	-	CCDS57361.1	5	481	3	0	1.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000095074	Gm3139	ENSMUST00000201138	ENSMUSP00000144523	TRANSLATION	protein_coding	-	-	1	189	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000095074	Gm3139	ENSMUST00000202642	ENSMUSP00000144005	TRANSLATION	protein_coding	-	CCDS57361.1	1	481	3	0	1.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000238963	ENSMUSP00000159046	TRANSLATION	protein_coding	-	-	-	1376	0	0	0	130.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000151567	ENSMUSP00000116870	TRANSLATION	protein_coding	start	-	3	95	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000120639	ENSMUSP00000113796	TRANSLATION	protein_coding	-	CCDS51526.1	1	1288	0	0	0.5	130.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000152373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000128112	ENSMUSP00000119799	TRANSLATION	protein_coding	stop	-	2	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000149216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000125922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000086909	ENSMUSP00000084125	TRANSLATION	protein_coding	start	-	-	165	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000120818	ENSMUSP00000113485	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000187287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000121851	ENSMUSP00000112941	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000163347	ENSMUSP00000127212	TRANSLATION	protein_coding	-	CCDS51526.1	1	1288	0	0	0.5	130.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036377	C530008M17Rik	ENSMUST00000121160	ENSMUSP00000113947	TRANSLATION	protein_coding	-	-	5	1291	0	0	0.5	130.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000072941	Sod3	ENSMUST00000101208	ENSMUSP00000098768	TRANSLATION	protein_coding	-	CCDS19283.1	1	251	8	1	0.5	107	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000028959	Fastk	ENSMUST00000115043	ENSMUSP00000110695	TRANSLATION	protein_coding	-	-	1	516	0	0	0	119.3	0	-4,-2	-	-	4.164	MINOR
ENSMUSG00000028959	Fastk	ENSMUST00000132498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000030800	ENSMUSP00000030800	TRANSLATION	protein_coding	-	CCDS19120.1	1	545	0	0	5.1	149.9	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000028959	Fastk	ENSMUST00000151900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000132109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000144866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000149085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000123144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000130577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028959	Fastk	ENSMUST00000139307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028959	Fastk	ENSMUST00000134958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028959	Fastk	ENSMUST00000115041	ENSMUSP00000110693	TRANSLATION	protein_coding	-	-	5	408	0	0	2.4	149.9	0	-4,-2	-	-	6.682	MINOR
ENSMUSG00000028959	Fastk	ENSMUST00000149537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028959	Fastk	ENSMUST00000131946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028959	Fastk	ENSMUST00000144389	ENSMUSP00000123447	TRANSLATION	nonsense_mediated_decay	-	-	5	141	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029322	Plac8	ENSMUST00000031264	ENSMUSP00000031264	TRANSLATION	protein_coding	-	CCDS19464.1	1	112	0	0	2.7	52.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029322	Plac8	ENSMUST00000112910	ENSMUSP00000108531	TRANSLATION	protein_coding	-	CCDS19464.1	2	112	0	0	2.7	52.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029322	Plac8	ENSMUST00000144595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029322	Plac8	ENSMUST00000097437	ENSMUSP00000108533	TRANSLATION	protein_coding	-	CCDS19464.1	2	112	0	0	2.7	52.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029375	Cxcl15	ENSMUST00000031322	ENSMUSP00000031322	TRANSLATION	protein_coding	-	CCDS19418.1	1	167	0	1.75	0.5	49.9	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096230	Gm16429	ENSMUST00000201400	ENSMUSP00000143980	TRANSLATION	protein_coding	-	-	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000096230	Gm16429	ENSMUST00000179824	ENSMUSP00000136364	TRANSLATION	protein_coding	-	-	1	481	2	0	1.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000025858	Get4	ENSMUST00000026976	ENSMUSP00000026976	TRANSLATION	protein_coding	-	CCDS19805.1	1	327	0	4.12	4.7	255.4	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000025858	Get4	ENSMUST00000130326	ENSMUSP00000117473	TRANSLATION	protein_coding	stop	-	3	246	0	3.16	0	177.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025858	Get4	ENSMUST00000124420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025858	Get4	ENSMUST00000110878	ENSMUSP00000106502	TRANSLATION	protein_coding	-	CCDS51682.1	1	274	0	3.56	4.1	255.4	0	-4,-6	-	-	11.716	MINOR
ENSMUSG00000025858	Get4	ENSMUST00000138508	ENSMUSP00000116975	TRANSLATION	protein_coding	stop	-	5	197	0	2.54	0	180	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025858	Get4	ENSMUST00000138059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038569	Rad9b	ENSMUST00000117263	ENSMUSP00000113868	TRANSLATION	protein_coding	-	-	1	366	0	5.23	0	233.8	0	-4,-6	-	-	3.954	MINOR
ENSMUSG00000038569	Rad9b	ENSMUST00000149600	ENSMUSP00000120843	TRANSLATION	protein_coding	start	-	5	92	0	1.93	0	76.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038569	Rad9b	ENSMUST00000144268	ENSMUSP00000117334	TRANSLATION	protein_coding	stop	-	3	64	0	1.48	0	51.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038569	Rad9b	ENSMUST00000049009	ENSMUSP00000036177	TRANSLATION	protein_coding	-	CCDS19646.1	1	403	0	7.23	0.5	301.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038569	Rad9b	ENSMUST00000200653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043733	Ptpn11	ENSMUST00000148407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043733	Ptpn11	ENSMUST00000100770	ENSMUSP00000098333	TRANSLATION	protein_coding	-	CCDS51637.1	1	593	12	12.17	10.8	446.8	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000043733	Ptpn11	ENSMUST00000054547	ENSMUSP00000058757	TRANSLATION	protein_coding	-	CCDS39247.1	1	597	12	12.17	10.8	441.9	0	-4,-7	-	-	20.706	PRINCIPAL:3
ENSMUSG00000043733	Ptpn11	ENSMUST00000148871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067698	Gm10220	ENSMUST00000088236	ENSMUSP00000085569	TRANSLATION	protein_coding	-	CCDS51444.1	5	267	0	0	0.5	82.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041313	Slc7a1	ENSMUST00000138257	ENSMUSP00000117781	TRANSLATION	protein_coding	stop	-	5	542	0	4.21	0	139	15	-4,-2	-	-	-1	MINOR
ENSMUSG00000041313	Slc7a1	ENSMUST00000201860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041313	Slc7a1	ENSMUST00000048116	ENSMUSP00000046714	TRANSLATION	protein_coding	-	CCDS19882.1	1	622	0	4.21	1.5	228.9	17	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041313	Slc7a1	ENSMUST00000138596	ENSMUSP00000122914	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	0	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000041313	Slc7a1	ENSMUST00000201348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041313	Slc7a1	ENSMUST00000202457	ENSMUSP00000144000	TRANSLATION	protein_coding	stop	-	5	142	0	1.86	0	51	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000079156	Smok3b	ENSMUST00000100537	ENSMUSP00000098105	TRANSLATION	protein_coding	-	CCDS39339.1	1	504	17	0.6	0.5	243.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079156	Smok3b	ENSMUST00000166206	ENSMUSP00000129450	TRANSLATION	protein_coding	-	CCDS39339.1	5	504	17	0.6	0.5	243.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042190	Cmklr1	ENSMUST00000142854	ENSMUSP00000115784	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042190	Cmklr1	ENSMUST00000132065	ENSMUSP00000121765	TRANSLATION	protein_coding	stop	-	1	301	0	0.48	0	121.8	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000042190	Cmklr1	ENSMUST00000151460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042190	Cmklr1	ENSMUST00000047936	ENSMUSP00000036316	TRANSLATION	protein_coding	-	CCDS19551.1	1	371	0	1.08	0.5	137	9	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070704	Ugt2b36	ENSMUST00000145617	ENSMUSP00000120005	TRANSLATION	protein_coding	stop	-	5	249	14	4.78	0	421.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000070704	Ugt2b36	ENSMUST00000132667	ENSMUSP00000123024	TRANSLATION	protein_coding	stop	-	5	265	14	3.59	0	314.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000070704	Ugt2b36	ENSMUST00000154455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070704	Ugt2b36	ENSMUST00000094649	ENSMUSP00000092233	TRANSLATION	protein_coding	-	CCDS19384.1	1	530	16	5.12	1.5	855.4	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034981	Parm1	ENSMUST00000040576	ENSMUSP00000042844	TRANSLATION	protein_coding	-	CCDS39146.1	1	296	0	0	1.5	389.1	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029491	Pde6b	ENSMUST00000134865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029491	Pde6b	ENSMUST00000130448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029491	Pde6b	ENSMUST00000031456	ENSMUSP00000031456	TRANSLATION	protein_coding	-	CCDS19510.1	1	856	4	11.545	5.1	355.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000089984	Fbxo24	ENSMUST00000031732	ENSMUSP00000031732	TRANSLATION	protein_coding	-	CCDS51674.1	1	589	0	2.32	0.5	68.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000089984	Fbxo24	ENSMUST00000136028	ENSMUSP00000121077	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089984	Fbxo24	ENSMUST00000111002	ENSMUSP00000106630	TRANSLATION	protein_coding	-	-	5	450	0	1.52	0	31.1	0	-4,-7	-	-	6.672	MINOR
ENSMUSG00000014932	Yes1	ENSMUST00000168707	ENSMUSP00000132161	TRANSLATION	protein_coding	-	CCDS39061.1	1	541	18	10.68	9.5	471.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000014932	Yes1	ENSMUST00000200779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014932	Yes1	ENSMUST00000200999	ENSMUSP00000144355	TRANSLATION	protein_coding	stop	-	5	198	0	3.93	0	120.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014932	Yes1	ENSMUST00000202543	ENSMUSP00000144001	TRANSLATION	protein_coding	-	CCDS39061.1	1	541	18	10.68	9.5	471.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000014932	Yes1	ENSMUST00000072311	ENSMUSP00000072154	TRANSLATION	protein_coding	-	CCDS39061.1	1	541	18	10.68	9.5	471.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000047215	Rpl9	ENSMUST00000147660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047215	Rpl9	ENSMUST00000127874	ENSMUSP00000115577	TRANSLATION	protein_coding	-	-	1	108	0	2.83	0	59.8	0	-4,-5	-	-	3.18	MINOR
ENSMUSG00000047215	Rpl9	ENSMUST00000150815	ENSMUSP00000143264	TRANSLATION	nonsense_mediated_decay	start	-	2	66	0	2	0	46.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047215	Rpl9	ENSMUST00000120094	ENSMUSP00000113704	TRANSLATION	protein_coding	-	CCDS39097.1	2	192	0	5.58	19.5	115.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047215	Rpl9	ENSMUST00000128074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047215	Rpl9	ENSMUST00000196667	ENSMUSP00000142883	TRANSLATION	protein_coding	start	-	3	191	0	5.58	19.5	115.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047215	Rpl9	ENSMUST00000151917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047215	Rpl9	ENSMUST00000118543	ENSMUSP00000113391	TRANSLATION	protein_coding	-	-	2	166	0	4.646	0	95.4	0	-4,-5	-	-	8.952	MINOR
ENSMUSG00000047215	Rpl9	ENSMUST00000147966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047215	Rpl9	ENSMUST00000057885	ENSMUSP00000109399	TRANSLATION	protein_coding	-	CCDS39097.1	1	192	0	5.58	19.5	115.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047215	Rpl9	ENSMUST00000140879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107392	Gm7792	ENSMUST00000201555	ENSMUSP00000143931	TRANSLATION	protein_coding	-	-	5	481	2	0	1.5	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000060512	0610040J01Rik	ENSMUST00000199667	ENSMUSP00000142539	TRANSLATION	protein_coding	stop	-	3	202	0	0	0	222.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060512	0610040J01Rik	ENSMUST00000081747	ENSMUSP00000080443	TRANSLATION	protein_coding	-	CCDS39092.1	1	313	0	0	1.5	399.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060512	0610040J01Rik	ENSMUST00000196367	ENSMUSP00000142658	TRANSLATION	protein_coding	stop	-	2	114	0	0	0	135.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060512	0610040J01Rik	ENSMUST00000196575	ENSMUSP00000142473	TRANSLATION	protein_coding	stop	-	3	215	0	0	0	244.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000106247	Gm43720	ENSMUST00000159067	ENSMUSP00000125178	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	267	0	2.95	0	290.9	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000057315	Arhgap24	ENSMUST00000112852	ENSMUSP00000108473	TRANSLATION	protein_coding	-	CCDS19475.1	1	654	0	4.2	7.5	164.7	0	-4,-5	-	-	6.732	MINOR
ENSMUSG00000057315	Arhgap24	ENSMUST00000126125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057315	Arhgap24	ENSMUST00000112854	ENSMUSP00000108475	TRANSLATION	protein_coding	-	CCDS19475.1	5	654	0	4.2	7.5	164.7	0	-4,-5	-	-	6.732	MINOR
ENSMUSG00000057315	Arhgap24	ENSMUST00000073302	ENSMUSP00000073028	TRANSLATION	protein_coding	-	CCDS19475.1	1	654	0	4.2	7.5	164.7	0	-4,-5	-	-	6.732	MINOR
ENSMUSG00000057315	Arhgap24	ENSMUST00000130222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057315	Arhgap24	ENSMUST00000112853	ENSMUSP00000108474	TRANSLATION	protein_coding	-	CCDS19475.1	5	654	0	4.2	7.5	164.7	0	-4,-5	-	-	6.732	MINOR
ENSMUSG00000057315	Arhgap24	ENSMUST00000070000	ENSMUSP00000070048	TRANSLATION	protein_coding	-	CCDS84922.1	5	657	0	3.4	7.5	164.7	0	-4,-6	-	-	5.13	MINOR
ENSMUSG00000057315	Arhgap24	ENSMUST00000094559	ENSMUSP00000092138	TRANSLATION	protein_coding	-	CCDS19474.1	1	747	8	6	6.5	242.5	0	-4,-5	-	-	20.538	PRINCIPAL:1
ENSMUSG00000008843	Cldn13	ENSMUST00000008987	ENSMUSP00000008987	TRANSLATION	protein_coding	-	CCDS39314.1	1	211	0	0.8	0.5	70.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029727	Cyp3a13	ENSMUST00000031741	ENSMUSP00000031741	TRANSLATION	protein_coding	-	CCDS19781.1	1	503	31	11.25	1.5	432	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000067206	Lrrc66	ENSMUST00000152215	ENSMUSP00000120280	TRANSLATION	protein_coding	stop	-	3	110	0	0.2	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000067206	Lrrc66	ENSMUST00000087177	ENSMUSP00000084423	TRANSLATION	protein_coding	-	CCDS19343.1	1	872	0	2.2	0.5	51.6	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094195	Gm6509	ENSMUST00000201552	ENSMUSP00000144354	TRANSLATION	protein_coding	-	-	5	481	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000094195	Gm6509	ENSMUST00000098286	ENSMUSP00000095887	TRANSLATION	protein_coding	stop	-	5	406	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029321	Slc10a6	ENSMUST00000031263	ENSMUSP00000031263	TRANSLATION	protein_coding	-	CCDS19477.1	1	373	0	2.125	1.5	135.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000046572	Zfp518b	ENSMUST00000178760	ENSMUSP00000136862	TRANSLATION	protein_coding	stop	-	2	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046572	Zfp518b	ENSMUST00000179555	ENSMUSP00000137381	TRANSLATION	protein_coding	-	CCDS39078.2	2	1082	12	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046572	Zfp518b	ENSMUST00000057258	ENSMUSP00000061753	TRANSLATION	protein_coding	-	CCDS39078.2	3	1082	12	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046572	Zfp518b	ENSMUST00000180214	ENSMUSP00000136948	TRANSLATION	protein_coding	stop	-	2	161	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055725	Paqr3	ENSMUST00000069453	ENSMUSP00000069324	TRANSLATION	protein_coding	-	CCDS19451.1	1	311	0	4.35	15.8	167.1	9	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000055725	Paqr3	ENSMUST00000112969	ENSMUSP00000108593	TRANSLATION	protein_coding	-	CCDS19451.1	1	311	0	4.35	15.8	167.1	9	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000055725	Paqr3	ENSMUST00000132127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055725	Paqr3	ENSMUST00000112968	ENSMUSP00000108592	TRANSLATION	protein_coding	-	-	1	171	0	2.4	0	90.3	5	-4,-6	-	-	3.492	MINOR
ENSMUSG00000055725	Paqr3	ENSMUST00000126585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055725	Paqr3	ENSMUST00000196078	ENSMUSP00000142871	TRANSLATION	protein_coding	stop	-	3	228	0	3	0	90.3	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000032840	2410131K14Rik	ENSMUST00000049138	ENSMUSP00000043410	TRANSLATION	protein_coding	-	CCDS39237.1	1	205	0	0	11.5	152.3	0	-1,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000066964	Tmem211	ENSMUST00000086615	ENSMUSP00000083808	TRANSLATION	protein_coding	-	CCDS19548.1	1	195	0	0	1.5	62.4	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025854	Fam20c	ENSMUST00000160988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025854	Fam20c	ENSMUST00000026972	ENSMUSP00000026972	TRANSLATION	protein_coding	-	CCDS51681.1	1	579	14	7.1	2.7	354.4	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000025854	Fam20c	ENSMUST00000159176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025854	Fam20c	ENSMUST00000160645	ENSMUSP00000124584	TRANSLATION	nonsense_mediated_decay	-	-	1	203	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025854	Fam20c	ENSMUST00000197027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025854	Fam20c	ENSMUST00000161641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051246	Msantd1	ENSMUST00000050535	ENSMUSP00000057362	TRANSLATION	protein_coding	-	CCDS19221.1	1	278	0	0	3.9	44.7	0	-2,0	-	-	7.074	PRINCIPAL:2
ENSMUSG00000051246	Msantd1	ENSMUST00000201636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051246	Msantd1	ENSMUST00000202205	ENSMUSP00000144008	TRANSLATION	protein_coding	-	CCDS80265.1	2	186	0	0	2.7	36.5	0	-2,0	-	-	5.532	MINOR
ENSMUSG00000051246	Msantd1	ENSMUST00000212362	ENSMUSP00000148522	TRANSLATION	protein_coding	-	-	5	265	0	0	6.4	44.7	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000079165	Sap25	ENSMUST00000177466	ENSMUSP00000135735	TRANSLATION	protein_coding	-	-	5	280	0	1	0	247.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000079165	Sap25	ENSMUST00000176256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079165	Sap25	ENSMUST00000177354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079165	Sap25	ENSMUST00000176075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079165	Sap25	ENSMUST00000166099	ENSMUSP00000127076	TRANSLATION	protein_coding	-	CCDS39336.2	1	261	0	1	0.5	247.3	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000079165	Sap25	ENSMUST00000177038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000153127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000141744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000196053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000140245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000125061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000173496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004415	Col26a1	ENSMUST00000156962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004415	Col26a1	ENSMUST00000111103	ENSMUSP00000106732	TRANSLATION	protein_coding	-	CCDS84976.1	1	438	0	3.45	5.1	95.3	0	1,-2	-	-	13.724	ALTERNATIVE:1
ENSMUSG00000004415	Col26a1	ENSMUST00000057497	ENSMUSP00000052095	TRANSLATION	protein_coding	-	CCDS19755.1	1	440	0	3.45	5.1	99.9	0	1,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000004415	Col26a1	ENSMUST00000126311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004415	Col26a1	ENSMUST00000147083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043410	Hfm1	ENSMUST00000117588	ENSMUSP00000112590	TRANSLATION	protein_coding	-	CCDS51582.1	5	1434	13	14.038	0.5	283.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043410	Hfm1	ENSMUST00000148495	ENSMUSP00000122169	TRANSLATION	nonsense_mediated_decay	start	-	5	49	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043410	Hfm1	ENSMUST00000200249	ENSMUSP00000142727	TRANSLATION	protein_coding	stop	-	1	410	12	3.25	0	64.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043410	Hfm1	ENSMUST00000112690	ENSMUSP00000108310	TRANSLATION	protein_coding	-	CCDS51582.1	5	1434	13	14.038	0.5	283.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043410	Hfm1	ENSMUST00000134292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043410	Hfm1	ENSMUST00000148686	ENSMUSP00000120112	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043410	Hfm1	ENSMUST00000155171	ENSMUSP00000118674	TRANSLATION	protein_coding	start	-	5	626	0	4.848	0	138.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029104	Htt	ENSMUST00000156490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000201613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000135039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000123755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000080036	ENSMUSP00000078945	TRANSLATION	protein_coding	-	CCDS19220.1	1	3120	0	0	0.5	74.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029104	Htt	ENSMUST00000148953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000202059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029104	Htt	ENSMUST00000124272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001569	Nom1	ENSMUST00000001611	ENSMUSP00000001611	TRANSLATION	protein_coding	-	CCDS19149.1	1	854	0	3.08	0.5	146.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001569	Nom1	ENSMUST00000146347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073119	Speer4a	ENSMUST00000079447	ENSMUSP00000078415	TRANSLATION	protein_coding	-	CCDS51441.1	1	267	0	0	0.5	84.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029015	Slc26a5	ENSMUST00000115176	ENSMUSP00000110830	TRANSLATION	protein_coding	-	CCDS71547.1	1	707	0	5.625	1.7	363	14	-4,-5	-	-	6.654	MINOR
ENSMUSG00000029015	Slc26a5	ENSMUST00000030878	ENSMUSP00000030878	TRANSLATION	protein_coding	-	CCDS19109.1	1	744	0	6.025	5.1	444.5	16	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029015	Slc26a5	ENSMUST00000150012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029015	Slc26a5	ENSMUST00000142888	ENSMUSP00000118263	TRANSLATION	nonsense_mediated_decay	-	-	5	447	0	2.14	0	290.9	16	-4,-5	-	-	-1	MINOR
ENSMUSG00000029015	Slc26a5	ENSMUST00000127975	ENSMUSP00000118029	TRANSLATION	protein_coding	stop	-	5	712	0	5.545	1.2	399	16	-4,-5	-	-	-1	MINOR
ENSMUSG00000029138	4930548H24Rik	ENSMUST00000031020	ENSMUSP00000031020	TRANSLATION	protein_coding	-	CCDS19184.1	1	437	0	0	0.5	250.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029138	4930548H24Rik	ENSMUST00000202441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000077220	ENSMUSP00000076458	TRANSLATION	protein_coding	-	CCDS51604.1	1	514	15	4.991	0.5	148.4	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000033434	Gtpbp6	ENSMUST00000136722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000131918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000127628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000199496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033434	Gtpbp6	ENSMUST00000138507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000131774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000135409	ENSMUSP00000117817	TRANSLATION	protein_coding	stop	-	2	221	1	2.981	0	99.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033434	Gtpbp6	ENSMUST00000149227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000138881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033434	Gtpbp6	ENSMUST00000144162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033434	Gtpbp6	ENSMUST00000140538	ENSMUSP00000115028	TRANSLATION	protein_coding	stop	-	5	17	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000154935	ENSMUSP00000119409	TRANSLATION	protein_coding	start/stop	-	5	267	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000138652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040537	Adam22	ENSMUST00000088761	ENSMUSP00000086139	TRANSLATION	protein_coding	-	CCDS80207.1	1	904	17	14.4	2.9	493.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040537	Adam22	ENSMUST00000196356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040537	Adam22	ENSMUST00000144241	ENSMUSP00000138353	TRANSLATION	nonsense_mediated_decay	start	-	5	150	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000143929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040537	Adam22	ENSMUST00000050166	ENSMUSP00000055000	TRANSLATION	protein_coding	-	CCDS51411.1	5	868	17	14.4	2.9	493.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040537	Adam22	ENSMUST00000130315	ENSMUSP00000121156	TRANSLATION	protein_coding	start/stop	-	5	192	0	1.15	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000124121	ENSMUSP00000122652	TRANSLATION	protein_coding	start	-	1	251	0	3.15	0	28.8	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000153427	ENSMUSP00000120995	TRANSLATION	protein_coding	start/stop	-	5	251	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000139048	ENSMUSP00000116736	TRANSLATION	protein_coding	start/stop	-	5	228	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000115386	ENSMUSP00000111044	TRANSLATION	protein_coding	-	-	5	897	17	14.4	2.9	493.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040537	Adam22	ENSMUST00000136808	ENSMUSP00000122426	TRANSLATION	protein_coding	start/stop	-	5	249	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000123168	ENSMUSP00000122758	TRANSLATION	protein_coding	start/stop	-	5	165	0	1.15	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000088744	ENSMUSP00000086122	TRANSLATION	protein_coding	-	-	5	927	17	14.4	0	493.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040537	Adam22	ENSMUST00000136524	ENSMUSP00000116422	TRANSLATION	protein_coding	start/stop	-	5	194	0	1.15	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000046838	ENSMUSP00000049120	TRANSLATION	protein_coding	-	CCDS19080.1	1	857	17	14.4	2.9	493.9	7	2,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000040537	Adam22	ENSMUST00000139841	ENSMUSP00000115775	TRANSLATION	protein_coding	start/stop	-	5	186	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000115385	ENSMUSP00000111043	TRANSLATION	protein_coding	-	-	2	333	2	2.5	0	191.9	0	2,-2	-	-	0	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000153889	ENSMUSP00000123196	TRANSLATION	protein_coding	start/stop	-	5	191	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000197700	ENSMUSP00000142580	TRANSLATION	protein_coding	start/stop	-	1	175	0	1.15	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000126384	ENSMUSP00000118571	TRANSLATION	protein_coding	start/stop	-	5	220	0	1.15	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000199853	ENSMUSP00000143097	TRANSLATION	protein_coding	start	-	1	138	0	1.15	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000040537	Adam22	ENSMUST00000115388	ENSMUSP00000111046	TRANSLATION	protein_coding	-	CCDS80205.1	5	899	17	14.4	0.5	493.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000035540	Gc	ENSMUST00000049209	ENSMUSP00000046636	TRANSLATION	protein_coding	-	CCDS19407.1	1	476	12	11.16	2.7	401.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000035540	Gc	ENSMUST00000200534	ENSMUSP00000143624	TRANSLATION	protein_coding	start	-	5	125	0	3.33	0	114.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047592	Nxpe5	ENSMUST00000162519	ENSMUSP00000124263	TRANSLATION	protein_coding	stop	-	1	152	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047592	Nxpe5	ENSMUST00000110929	ENSMUSP00000106554	TRANSLATION	protein_coding	-	CCDS51679.1	5	542	0	0	0.5	66.7	0	-1,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000047592	Nxpe5	ENSMUST00000159798	ENSMUSP00000124381	TRANSLATION	protein_coding	-	CCDS51679.1	1	542	0	0	0.5	66.7	0	-1,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000047592	Nxpe5	ENSMUST00000161047	ENSMUSP00000124929	TRANSLATION	protein_coding	-	-	1	564	0	0	0.5	66.7	0	-1,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000047592	Nxpe5	ENSMUST00000159964	ENSMUSP00000123835	TRANSLATION	protein_coding	-	-	5	543	0	0	0	66.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037364	Srrt	ENSMUST00000196576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000040873	ENSMUSP00000043123	TRANSLATION	protein_coding	-	CCDS39331.1	5	875	3	3.1	0.5	446.9	0	-4,-5	-	-	14.922	PRINCIPAL:3
ENSMUSG00000037364	Srrt	ENSMUST00000196960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000199473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000196394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000197409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000197484	ENSMUSP00000142660	TRANSLATION	nonsense_mediated_decay	-	-	3	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000223263	ENSMUSP00000152514	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	0.6	0	52.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000197466	ENSMUSP00000142564	TRANSLATION	protein_coding	-	CCDS80439.1	5	864	3	3.1	0.5	447.8	0	-4,-5	-	-	14.976	ALTERNATIVE:2
ENSMUSG00000037364	Srrt	ENSMUST00000196109	ENSMUSP00000142351	TRANSLATION	protein_coding	start	-	5	517	3	1.75	0	305.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000199243	ENSMUSP00000143232	TRANSLATION	protein_coding	-	CCDS80440.1	1	868	3	3.1	0.5	448.2	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000037364	Srrt	ENSMUST00000199605	ENSMUSP00000142344	TRANSLATION	nonsense_mediated_decay	start	-	5	239	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000200643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000199365	ENSMUSP00000143454	TRANSLATION	nonsense_mediated_decay	start	-	5	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000199756	ENSMUSP00000143442	TRANSLATION	protein_coding	start/stop	-	5	269	3	1.35	0	307.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000197144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037364	Srrt	ENSMUST00000198526	ENSMUSP00000142435	TRANSLATION	nonsense_mediated_decay	-	-	5	467	0	1.35	0	141.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037364	Srrt	ENSMUST00000197376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037224	Zfyve28	ENSMUST00000114370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037224	Zfyve28	ENSMUST00000132104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037224	Zfyve28	ENSMUST00000130435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037224	Zfyve28	ENSMUST00000114369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037224	Zfyve28	ENSMUST00000114368	ENSMUSP00000110008	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037224	Zfyve28	ENSMUST00000094868	ENSMUSP00000092464	TRANSLATION	protein_coding	-	CCDS39068.1	1	905	8	2.48	1.5	68.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000038593	Tctn1	ENSMUST00000141281	ENSMUSP00000114820	TRANSLATION	nonsense_mediated_decay	-	-	1	396	0	0	0	250.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000038593	Tctn1	ENSMUST00000177148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038593	Tctn1	ENSMUST00000137118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038593	Tctn1	ENSMUST00000176677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038593	Tctn1	ENSMUST00000111738	ENSMUSP00000107367	TRANSLATION	protein_coding	-	CCDS39254.1	1	593	0	0	1.5	273.9	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000004530	Coro1c	ENSMUST00000168634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004530	Coro1c	ENSMUST00000004646	ENSMUSP00000004646	TRANSLATION	protein_coding	-	CCDS19555.1	1	474	0	8.88	16	249.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000004530	Coro1c	ENSMUST00000164980	ENSMUSP00000129314	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	3.5	0	140.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004530	Coro1c	ENSMUST00000166647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004530	Coro1c	ENSMUST00000168493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004530	Coro1c	ENSMUST00000111283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004530	Coro1c	ENSMUST00000171630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004530	Coro1c	ENSMUST00000163264	ENSMUSP00000129457	TRANSLATION	protein_coding	stop	-	2	85	0	1.75	0	113.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004530	Coro1c	ENSMUST00000163995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004530	Coro1c	ENSMUST00000168399	ENSMUSP00000132504	TRANSLATION	protein_coding	stop	-	5	66	0	1	0	109.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004530	Coro1c	ENSMUST00000172016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041939	Mvk	ENSMUST00000043760	ENSMUSP00000036971	TRANSLATION	protein_coding	-	CCDS19566.1	1	395	19	9.25	1.5	124.4	0	-4,-6	-	-	17.58	PRINCIPAL:3
ENSMUSG00000041939	Mvk	ENSMUST00000112239	ENSMUSP00000107858	TRANSLATION	protein_coding	-	CCDS80373.1	1	407	19	9.46	0.5	124.4	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041939	Mvk	ENSMUST00000125120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041939	Mvk	ENSMUST00000137167	ENSMUSP00000142758	TRANSLATION	protein_coding	-	-	2	226	17	5.25	0	102.5	0	-4,-6	-	-	9.354	MINOR
ENSMUSG00000041939	Mvk	ENSMUST00000125650	ENSMUSP00000114611	TRANSLATION	protein_coding	stop	-	5	266	17	6.21	0	102.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041939	Mvk	ENSMUST00000124260	ENSMUSP00000143347	TRANSLATION	protein_coding	-	-	5	238	17	5.46	0	102.5	0	-4,-6	-	-	9.354	MINOR
ENSMUSG00000041939	Mvk	ENSMUST00000139420	ENSMUSP00000142376	TRANSLATION	protein_coding	start	-	5	136	2	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072720	Myo18b	ENSMUST00000183029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072720	Myo18b	ENSMUST00000182189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072720	Myo18b	ENSMUST00000183273	ENSMUSP00000138689	TRANSLATION	nonsense_mediated_decay	start	-	1	75	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072720	Myo18b	ENSMUST00000086617	ENSMUSP00000083810	TRANSLATION	protein_coding	-	CCDS51618.1	5	2605	0	15.475	0.5	311.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029371	Cxcl5	ENSMUST00000031318	ENSMUSP00000031318	TRANSLATION	protein_coding	-	CCDS19414.1	2	132	0	1.85	1.5	48	0	1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000029371	Cxcl5	ENSMUST00000202380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061755	Bod1l	ENSMUST00000202200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061755	Bod1l	ENSMUST00000050556	ENSMUSP00000058618	TRANSLATION	protein_coding	-	CCDS39079.1	5	3032	0	0	0.5	85.8	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000061755	Bod1l	ENSMUST00000201291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061755	Bod1l	ENSMUST00000202908	ENSMUSP00000144359	TRANSLATION	protein_coding	-	CCDS80273.1	5	2985	0	0	0.5	85.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037428	Vgf	ENSMUST00000190827	ENSMUSP00000140815	TRANSLATION	protein_coding	-	CCDS19760.1	1	617	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000037428	Vgf	ENSMUST00000186451	ENSMUSP00000140735	TRANSLATION	protein_coding	-	CCDS19760.1	5	617	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000037428	Vgf	ENSMUST00000187382	ENSMUSP00000140093	TRANSLATION	protein_coding	stop	-	2	140	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037428	Vgf	ENSMUST00000041543	ENSMUSP00000048273	TRANSLATION	protein_coding	-	CCDS19760.1	1	617	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000094036	Gm6465	ENSMUST00000168154	ENSMUSP00000131137	TRANSLATION	protein_coding	start	-	5	181	0	0	0	81.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029119	Man2b2	ENSMUST00000147893	ENSMUSP00000114319	TRANSLATION	protein_coding	start	-	5	104	0	0.75	0	23.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029119	Man2b2	ENSMUST00000124711	ENSMUSP00000115495	TRANSLATION	protein_coding	start	-	1	494	0	2.98	0	261.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029119	Man2b2	ENSMUST00000031002	ENSMUSP00000031002	TRANSLATION	protein_coding	-	CCDS19243.1	1	1018	5	9.75	0.5	710.8	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000075543	Urad	ENSMUST00000100433	ENSMUSP00000098000	TRANSLATION	protein_coding	-	CCDS39399.1	1	178	9	2	0.5	136.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070686	C87414	ENSMUST00000161919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070686	C87414	ENSMUST00000160382	ENSMUSP00000125428	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070686	C87414	ENSMUST00000162964	ENSMUSP00000124780	TRANSLATION	protein_coding	-	CCDS51552.1	1	475	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:2
ENSMUSG00000070686	C87414	ENSMUST00000159691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070686	C87414	ENSMUST00000159578	ENSMUSP00000124250	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070686	C87414	ENSMUST00000076321	ENSMUSP00000075662	TRANSLATION	protein_coding	-	-	1	278	2	0	0.5	0	0	-4,-7	-	-	2	ALTERNATIVE:2
ENSMUSG00000015882	Lcorl	ENSMUST00000016026	ENSMUSP00000016026	TRANSLATION	protein_coding	-	CCDS51499.1	1	600	2	0.2	6.6	83.2	0	-1,1	-	-	10	PRINCIPAL:1
ENSMUSG00000015882	Lcorl	ENSMUST00000200142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015882	Lcorl	ENSMUST00000045586	ENSMUSP00000042677	TRANSLATION	protein_coding	-	CCDS19277.1	1	315	2	0	6.6	0	0	-1,1	-	-	4	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000187615	ENSMUSP00000139466	TRANSLATION	nonsense_mediated_decay	start	-	2	49	0	0	0	0	0	-1,3	-	-	-1	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000238522	ENSMUSP00000158672	TRANSLATION	protein_coding	-	-	-	1851	2	0	0.5	530	0	-1,1	-	-	8	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000186633	ENSMUSP00000141174	TRANSLATION	protein_coding	start/stop	-	3	117	2	0	0	0	0	-1,3	-	-	-1	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000190036	ENSMUSP00000140503	TRANSLATION	protein_coding	start	-	1	220	2	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000156295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015882	Lcorl	ENSMUST00000189859	ENSMUSP00000139996	TRANSLATION	protein_coding	start/stop	-	3	128	2	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000121573	ENSMUSP00000112416	TRANSLATION	protein_coding	-	-	1	232	2	0	1	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000087164	ENSMUSP00000084408	TRANSLATION	protein_coding	-	CCDS19278.1	1	517	2	0.2	2.7	83.2	0	-4,-5	-	-	8.608	MINOR
ENSMUSG00000015882	Lcorl	ENSMUST00000067997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038828	Tmem214	ENSMUST00000201234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038828	Tmem214	ENSMUST00000202774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038828	Tmem214	ENSMUST00000114716	ENSMUSP00000110364	TRANSLATION	protein_coding	-	-	5	642	0	0	0	676	0	-4,-2	-	-	0.648	MINOR
ENSMUSG00000038828	Tmem214	ENSMUST00000202050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038828	Tmem214	ENSMUST00000202008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038828	Tmem214	ENSMUST00000201203	ENSMUSP00000144615	TRANSLATION	protein_coding	-	CCDS19164.1	1	687	0	0	1.5	765.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000038828	Tmem214	ENSMUST00000202951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038135	Crygn	ENSMUST00000047119	ENSMUSP00000035860	TRANSLATION	protein_coding	-	CCDS19129.1	1	183	3	2.998	12.6	215.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000038135	Crygn	ENSMUST00000123386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054537	Tmprss11e	ENSMUST00000161306	ENSMUSP00000124534	TRANSLATION	protein_coding	-	CCDS51533.1	1	423	6	4	5.3	302.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000001082	Mfsd10	ENSMUST00000149657	ENSMUSP00000118786	TRANSLATION	protein_coding	stop	-	5	266	0	1.911	0	92.2	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000130347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000155577	ENSMUSP00000115204	TRANSLATION	protein_coding	stop	-	5	278	0	1.911	0	92.2	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000136010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000114331	ENSMUSP00000109970	TRANSLATION	protein_coding	-	CCDS19217.1	1	456	0	1.911	1.5	136.1	17	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001082	Mfsd10	ENSMUST00000124668	ENSMUSP00000119140	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000134156	ENSMUSP00000143812	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0.631	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000138212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001082	Mfsd10	ENSMUST00000001109	ENSMUSP00000001109	TRANSLATION	protein_coding	-	CCDS19217.1	1	456	0	1.911	1.5	136.1	17	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001082	Mfsd10	ENSMUST00000137744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000151247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001082	Mfsd10	ENSMUST00000148270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000137506	ENSMUSP00000144121	TRANSLATION	protein_coding	start/stop	-	1	113	0	0.42	0	0	4	1,-3	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000200717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000202065	ENSMUSP00000144466	TRANSLATION	protein_coding	start/stop	-	1	45	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000126257	ENSMUSP00000144630	TRANSLATION	nonsense_mediated_decay	-	-	3	140	0	0.831	0	35.3	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000128670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001082	Mfsd10	ENSMUST00000202378	ENSMUSP00000144117	TRANSLATION	nonsense_mediated_decay	start	-	3	141	0	0.42	0	0	5	1,-3	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000137150	ENSMUSP00000120814	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0.2	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000001082	Mfsd10	ENSMUST00000114329	ENSMUSP00000109968	TRANSLATION	protein_coding	-	CCDS19217.1	1	456	0	1.911	1.5	136.1	17	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001082	Mfsd10	ENSMUST00000201147	ENSMUSP00000144239	TRANSLATION	protein_coding	start/stop	-	3	130	0	0.66	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029607	Ankrd61	ENSMUST00000110718	ENSMUSP00000106346	TRANSLATION	protein_coding	-	-	1	378	0	1.57	0	74.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029607	Ankrd61	ENSMUST00000110717	ENSMUSP00000106345	TRANSLATION	protein_coding	-	CCDS39373.1	1	421	0	1.42	1.5	74.8	0	-4,-6	-	-	11.424	PRINCIPAL:3
ENSMUSG00000029607	Ankrd61	ENSMUST00000079624	ENSMUSP00000078571	TRANSLATION	protein_coding	-	CCDS80460.1	1	379	0	1.42	0.5	74.8	0	-4,-7	-	-	11.424	ALTERNATIVE:2
ENSMUSG00000029343	Crybb1	ENSMUST00000131673	ENSMUSP00000118399	TRANSLATION	protein_coding	stop	-	2	236	3	4.4	0	191.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029343	Crybb1	ENSMUST00000031286	ENSMUSP00000031286	TRANSLATION	protein_coding	-	CCDS19537.1	1	250	3	4.9	3.9	191.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029343	Crybb1	ENSMUST00000112375	ENSMUSP00000107994	TRANSLATION	protein_coding	-	CCDS19537.1	3	250	3	4.9	3.9	191.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029346	Srrd	ENSMUST00000031289	ENSMUSP00000031289	TRANSLATION	protein_coding	-	CCDS51614.1	1	249	0	0	0.5	61.3	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029346	Srrd	ENSMUST00000156083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029346	Srrd	ENSMUST00000146510	ENSMUSP00000119870	TRANSLATION	protein_coding	start	-	2	349	0	0	0.5	61.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029346	Srrd	ENSMUST00000147940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029346	Srrd	ENSMUST00000125628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029346	Srrd	ENSMUST00000155756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036968	Cnpy4	ENSMUST00000130126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036968	Cnpy4	ENSMUST00000110934	ENSMUSP00000106559	TRANSLATION	protein_coding	-	CCDS39341.1	1	245	0	0	1.5	165.8	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000036968	Cnpy4	ENSMUST00000110932	ENSMUSP00000106557	TRANSLATION	protein_coding	stop	-	3	160	0	0	0	131.7	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000029720	Gm20605	ENSMUST00000177545	ENSMUSP00000135286	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	680	0	6.09	0.5	124	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000029207	Apbb2	ENSMUST00000201776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029207	Apbb2	ENSMUST00000161936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029207	Apbb2	ENSMUST00000162401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029207	Apbb2	ENSMUST00000162994	ENSMUSP00000125603	TRANSLATION	protein_coding	stop	-	2	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000162382	ENSMUSP00000124139	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000160185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029207	Apbb2	ENSMUST00000087256	ENSMUSP00000084511	TRANSLATION	protein_coding	-	-	5	760	0	7.35	7.5	199	0	-4,-6	-	-	14.82	ALTERNATIVE:1
ENSMUSG00000029207	Apbb2	ENSMUST00000159512	ENSMUSP00000124807	TRANSLATION	protein_coding	-	CCDS57346.1	1	738	0	7.35	6.3	199.4	0	-4,-6	-	-	14.289	ALTERNATIVE:1
ENSMUSG00000029207	Apbb2	ENSMUST00000159357	ENSMUSP00000124127	TRANSLATION	protein_coding	stop	-	5	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000162366	ENSMUSP00000125116	TRANSLATION	protein_coding	-	CCDS80292.1	1	736	0	7.35	6.3	199.4	0	-4,-6	-	-	14.289	ALTERNATIVE:1
ENSMUSG00000029207	Apbb2	ENSMUST00000160103	ENSMUSP00000123766	TRANSLATION	protein_coding	stop	-	2	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000160775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029207	Apbb2	ENSMUST00000161771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029207	Apbb2	ENSMUST00000159786	ENSMUSP00000125211	TRANSLATION	protein_coding	-	CCDS57344.1	1	737	0	7.35	6.3	199.4	0	-4,-6	-	-	14.289	ALTERNATIVE:1
ENSMUSG00000029207	Apbb2	ENSMUST00000161716	ENSMUSP00000124350	TRANSLATION	protein_coding	stop	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000162349	ENSMUSP00000123752	TRANSLATION	protein_coding	-	CCDS51510.1	5	760	0	7.35	7.5	202	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000029207	Apbb2	ENSMUST00000160063	ENSMUSP00000123778	TRANSLATION	nonsense_mediated_decay	-	-	5	510	0	3	1.2	99.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000160870	ENSMUSP00000123978	TRANSLATION	protein_coding	-	CCDS57345.1	1	758	0	7.35	7.5	199.4	0	-4,-6	-	-	14.844	ALTERNATIVE:1
ENSMUSG00000029207	Apbb2	ENSMUST00000162955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029207	Apbb2	ENSMUST00000161879	ENSMUSP00000125550	TRANSLATION	protein_coding	stop	-	5	102	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029207	Apbb2	ENSMUST00000159847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011831	Evi5	ENSMUST00000112642	ENSMUSP00000108261	TRANSLATION	protein_coding	-	CCDS39198.1	1	809	0	6.364	1.5	184.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000011831	Evi5	ENSMUST00000141673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011831	Evi5	ENSMUST00000128723	ENSMUSP00000114845	TRANSLATION	protein_coding	stop	-	5	660	0	6.364	0	184.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000011831	Evi5	ENSMUST00000132406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011831	Evi5	ENSMUST00000133411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011831	Evi5	ENSMUST00000132482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011831	Evi5	ENSMUST00000136677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011831	Evi5	ENSMUST00000155955	ENSMUSP00000119758	TRANSLATION	protein_coding	stop	-	5	222	0	1.33	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011831	Evi5	ENSMUST00000127579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011831	Evi5	ENSMUST00000124590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011831	Evi5	ENSMUST00000124034	ENSMUSP00000121761	TRANSLATION	protein_coding	stop	-	1	376	0	5.8	0	184.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000011831	Evi5	ENSMUST00000138111	ENSMUSP00000119196	TRANSLATION	protein_coding	stop	-	1	365	0	5.25	0	184.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000011831	Evi5	ENSMUST00000155897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094560	A430089I19Rik	ENSMUST00000097479	ENSMUSP00000095087	TRANSLATION	protein_coding	-	CCDS51557.1	1	407	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000062234	Gak	ENSMUST00000133745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062234	Gak	ENSMUST00000135225	ENSMUSP00000118008	TRANSLATION	nonsense_mediated_decay	-	-	1	128	16	3.5	0	35.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000199662	ENSMUSP00000143646	TRANSLATION	nonsense_mediated_decay	-	-	5	51	1	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000196010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062234	Gak	ENSMUST00000145935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062234	Gak	ENSMUST00000156110	ENSMUSP00000115184	TRANSLATION	protein_coding	start	-	1	608	0	5.42	0	71	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000139303	ENSMUSP00000116862	TRANSLATION	nonsense_mediated_decay	start	-	5	187	0	4.08	0	82.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000137872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062234	Gak	ENSMUST00000200204	ENSMUSP00000143359	TRANSLATION	protein_coding	start/stop	-	1	129	0	3.08	0	46.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000199010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062234	Gak	ENSMUST00000145467	ENSMUSP00000118713	TRANSLATION	nonsense_mediated_decay	-	-	2	128	16	3.5	0	35.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062234	Gak	ENSMUST00000046603	ENSMUSP00000036705	TRANSLATION	protein_coding	-	CCDS19513.1	1	1305	20	22.02	1.5	291.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062234	Gak	ENSMUST00000199048	ENSMUSP00000142931	TRANSLATION	nonsense_mediated_decay	-	-	1	90	9	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079363	Gbp4	ENSMUST00000198278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079363	Gbp4	ENSMUST00000100962	ENSMUSP00000098522	TRANSLATION	protein_coding	-	CCDS57368.1	1	631	14	10.398	0.5	695.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079363	Gbp4	ENSMUST00000196677	ENSMUSP00000142795	TRANSLATION	protein_coding	stop	-	2	149	5	4.05	0	169.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079363	Gbp4	ENSMUST00000199629	ENSMUSP00000143689	TRANSLATION	protein_coding	stop	-	2	127	5	3.3	0	148.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079363	Gbp4	ENSMUST00000196204	ENSMUSP00000142528	TRANSLATION	nonsense_mediated_decay	-	-	1	103	9	1	0	50.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079363	Gbp4	ENSMUST00000197799	ENSMUSP00000142493	TRANSLATION	protein_coding	stop	-	3	184	9	3.748	0	182.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056586	Zar1l	ENSMUST00000118769	ENSMUSP00000114116	TRANSLATION	protein_coding	-	CCDS51709.1	1	291	8	0	0.5	36.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029730	Mcm7	ENSMUST00000155902	ENSMUSP00000120243	TRANSLATION	protein_coding	stop	-	5	110	4	2.65	0	53.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000142254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029730	Mcm7	ENSMUST00000148879	ENSMUSP00000116131	TRANSLATION	protein_coding	-	-	5	389	4	7.355	0	195	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000139223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029730	Mcm7	ENSMUST00000125316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029730	Mcm7	ENSMUST00000139983	ENSMUSP00000121446	TRANSLATION	protein_coding	stop	-	3	110	4	2.65	0	53.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000148094	ENSMUSP00000121344	TRANSLATION	protein_coding	stop	-	2	50	0	0.9	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000147920	ENSMUSP00000116169	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000153867	ENSMUSP00000121566	TRANSLATION	protein_coding	stop	-	5	142	4	3.73	0	86.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029730	Mcm7	ENSMUST00000000505	ENSMUSP00000000505	TRANSLATION	protein_coding	-	CCDS19793.1	1	719	19	12.627	8.8	640.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000239050	ENSMUSP00000159004	TRANSLATION	protein_coding	-	CCDS19504.1	-	186	0	0	2.7	280.6	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000159902	ENSMUSP00000124574	TRANSLATION	protein_coding	-	-	5	175	0	0	0.5	280.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000162591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000058921	ENSMUSP00000058373	TRANSLATION	protein_coding	-	-	2	184	0	0	2.7	280.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000163064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089798	1700028K03Rik	ENSMUST00000238787	ENSMUSP00000158924	TRANSLATION	protein_coding	-	CCDS51586.1	-	177	0	0	0.5	280.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000029718	Pcolce	ENSMUST00000136649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029718	Pcolce	ENSMUST00000031731	ENSMUSP00000031731	TRANSLATION	protein_coding	-	CCDS39334.1	1	468	8	7.28	1.5	250.2	0	4,-1	-	-	17.7	PRINCIPAL:2
ENSMUSG00000029718	Pcolce	ENSMUST00000155251	ENSMUSP00000121575	TRANSLATION	protein_coding	stop	-	5	124	3	1.73	0	78.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029718	Pcolce	ENSMUST00000137210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029718	Pcolce	ENSMUST00000197912	ENSMUSP00000142608	TRANSLATION	protein_coding	start	-	5	246	3	4.8	0	137.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029718	Pcolce	ENSMUST00000054564	ENSMUSP00000057002	TRANSLATION	protein_coding	-	-	5	493	8	7.43	0.5	250.2	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000029718	Pcolce	ENSMUST00000148662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029718	Pcolce	ENSMUST00000131703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029718	Pcolce	ENSMUST00000124693	ENSMUSP00000120749	TRANSLATION	protein_coding	stop	-	5	124	3	1.73	0	78.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029718	Pcolce	ENSMUST00000128755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029718	Pcolce	ENSMUST00000146589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029718	Pcolce	ENSMUST00000142675	ENSMUSP00000115654	TRANSLATION	protein_coding	stop	-	2	214	5	3.84	0	157.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039477	Tnrc18	ENSMUST00000198932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039477	Tnrc18	ENSMUST00000200371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039477	Tnrc18	ENSMUST00000155461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039477	Tnrc18	ENSMUST00000196888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039477	Tnrc18	ENSMUST00000152247	ENSMUSP00000117651	TRANSLATION	protein_coding	start	-	5	2673	0	0.48	0	35.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039477	Tnrc18	ENSMUST00000151477	ENSMUSP00000114769	TRANSLATION	protein_coding	-	CCDS19830.1	1	1755	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000039477	Tnrc18	ENSMUST00000198181	ENSMUSP00000143178	TRANSLATION	protein_coding	stop	-	5	114	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038295	Atg9b	ENSMUST00000128831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038295	Atg9b	ENSMUST00000138716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038295	Atg9b	ENSMUST00000059401	ENSMUSP00000051864	TRANSLATION	protein_coding	-	CCDS39027.1	1	922	0	0	1.5	328.8	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000197161	ENSMUSP00000143461	TRANSLATION	nonsense_mediated_decay	start	-	2	83	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000197087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000199526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000197931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000037865	ENSMUSP00000039737	TRANSLATION	protein_coding	-	CCDS84963.1	1	856	0	12.3	7.5	1017.9	0	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000198382	ENSMUSP00000143284	TRANSLATION	nonsense_mediated_decay	-	-	2	182	0	2.29	0	96.5	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000038023	Atp6v0a2	ENSMUST00000200292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118522	CAAA01077340.1	ENSMUST00000239135	ENSMUSP00000159075	TRANSLATION	protein_coding	start	-	-	341	0	0	0	28.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000029306	Ibsp	ENSMUST00000031246	ENSMUSP00000031246	TRANSLATION	protein_coding	-	CCDS19485.1	1	324	0	0	0.5	412.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029430	Ran	ENSMUST00000031383	ENSMUSP00000031383	TRANSLATION	protein_coding	-	CCDS19693.1	1	216	23	4.75	19.5	168.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029430	Ran	ENSMUST00000111343	ENSMUSP00000106975	TRANSLATION	protein_coding	-	CCDS19693.1	1	216	23	4.75	19.5	168.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029430	Ran	ENSMUST00000134632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029128	Rab28	ENSMUST00000202913	ENSMUSP00000144440	TRANSLATION	protein_coding	-	CCDS80271.1	1	193	22	5.25	2.7	133.6	0	-4,-5	-	-	17.544	MINOR
ENSMUSG00000029128	Rab28	ENSMUST00000201473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029128	Rab28	ENSMUST00000031011	ENSMUSP00000031011	TRANSLATION	protein_coding	-	CCDS19258.1	1	221	22	5.55	16.3	133.6	0	-4,-5	-	-	21.7	PRINCIPAL:3
ENSMUSG00000029128	Rab28	ENSMUST00000200702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029128	Rab28	ENSMUST00000201422	ENSMUSP00000144541	TRANSLATION	protein_coding	-	CCDS80272.1	5	220	22	5.7	11.8	133.6	0	-4,-5	-	-	20.824	ALTERNATIVE:1
ENSMUSG00000061292	Cyp3a59	ENSMUST00000199212	ENSMUSP00000142591	TRANSLATION	nonsense_mediated_decay	-	-	1	149	6	3.5	0	72	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000061292	Cyp3a59	ENSMUST00000035571	ENSMUSP00000049494	TRANSLATION	protein_coding	-	CCDS39390.1	1	503	31	11.25	1.5	420.9	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042719	Naa25	ENSMUST00000174322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042719	Naa25	ENSMUST00000172908	ENSMUSP00000134345	TRANSLATION	nonsense_mediated_decay	start	-	2	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042719	Naa25	ENSMUST00000173895	ENSMUSP00000134679	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042719	Naa25	ENSMUST00000131598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042719	Naa25	ENSMUST00000151458	ENSMUSP00000120970	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042719	Naa25	ENSMUST00000042163	ENSMUSP00000038977	TRANSLATION	protein_coding	-	CCDS19633.1	1	972	0	1.78	7.5	419	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000029112	Nkx1-1	ENSMUST00000173348	ENSMUSP00000133620	TRANSLATION	protein_coding	-	-	5	402	0	0.2	0	73.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000105875	Gm43518	ENSMUST00000166129	ENSMUSP00000143501	TRANSLATION	protein_coding,RT	stop	-	3	165	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000029234	Tmem165	ENSMUST00000136424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029234	Tmem165	ENSMUST00000130842	ENSMUSP00000114647	TRANSLATION	protein_coding	stop	-	1	90	0	0	0	44.9	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000029234	Tmem165	ENSMUST00000138544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029234	Tmem165	ENSMUST00000153633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029234	Tmem165	ENSMUST00000031144	ENSMUSP00000031144	TRANSLATION	protein_coding	-	CCDS19359.1	1	323	0	0	5.1	156.4	6	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000001844	Zdhhc4	ENSMUST00000161915	ENSMUSP00000124813	TRANSLATION	protein_coding	-	CCDS19840.1	5	343	4	0	3.9	119.2	9	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000001844	Zdhhc4	ENSMUST00000159718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001844	Zdhhc4	ENSMUST00000162284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001844	Zdhhc4	ENSMUST00000001900	ENSMUSP00000001900	TRANSLATION	protein_coding	-	CCDS19840.1	1	343	4	0	3.9	119.2	9	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000001844	Zdhhc4	ENSMUST00000159941	ENSMUSP00000124026	TRANSLATION	protein_coding	stop	-	5	178	4	0	0	39	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000001844	Zdhhc4	ENSMUST00000162066	ENSMUSP00000125130	TRANSLATION	protein_coding	stop	-	5	89	0	0	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000001844	Zdhhc4	ENSMUST00000160061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001844	Zdhhc4	ENSMUST00000159813	ENSMUSP00000137935	TRANSLATION	nonsense_mediated_decay	-	-	1	186	5	0	0	0	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000001844	Zdhhc4	ENSMUST00000162287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001844	Zdhhc4	ENSMUST00000161333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001844	Zdhhc4	ENSMUST00000161199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001844	Zdhhc4	ENSMUST00000162358	ENSMUSP00000124416	TRANSLATION	protein_coding	stop	-	5	123	0	0	0	0	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000001844	Zdhhc4	ENSMUST00000162941	ENSMUSP00000124997	TRANSLATION	protein_coding	stop	-	5	176	4	0	0	33.1	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000050640	Tmem150c	ENSMUST00000165548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050640	Tmem150c	ENSMUST00000146731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050640	Tmem150c	ENSMUST00000124145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050640	Tmem150c	ENSMUST00000063192	ENSMUSP00000057116	TRANSLATION	protein_coding	-	CCDS19461.1	1	249	0	0	12.8	146.5	6	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000050640	Tmem150c	ENSMUST00000139520	ENSMUSP00000114464	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	76.5	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000034040	Galnt17	ENSMUST00000160807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034040	Galnt17	ENSMUST00000086023	ENSMUSP00000083187	TRANSLATION	protein_coding	-	CCDS39296.1	1	598	15	6.66	9.7	166.1	1	-1,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000034040	Galnt17	ENSMUST00000161228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034040	Galnt17	ENSMUST00000162966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034040	Galnt17	ENSMUST00000160609	ENSMUSP00000125395	TRANSLATION	protein_coding	-	-	5	371	12	3.9992	0	102.2	1	-1,-6	-	-	6.846	MINOR
ENSMUSG00000036687	Tmem184a	ENSMUST00000147328	ENSMUSP00000119412	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036687	Tmem184a	ENSMUST00000044002	ENSMUSP00000035399	TRANSLATION	protein_coding	-	CCDS51685.1	1	449	0	0	1.5	311.7	4	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000036687	Tmem184a	ENSMUST00000146780	ENSMUSP00000117714	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000036687	Tmem184a	ENSMUST00000110832	ENSMUSP00000106456	TRANSLATION	protein_coding	-	CCDS39354.1	1	425	0	0	1.5	311.7	4	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000036687	Tmem184a	ENSMUST00000132677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025825	Iscu	ENSMUST00000145778	ENSMUSP00000117053	TRANSLATION	protein_coding	start	-	3	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025825	Iscu	ENSMUST00000112312	ENSMUSP00000107931	TRANSLATION	protein_coding	-	-	5	209	7	3.15	0	165.8	0	-3,1	-	-	14.886	MINOR
ENSMUSG00000025825	Iscu	ENSMUST00000026937	ENSMUSP00000026937	TRANSLATION	protein_coding	-	CCDS19553.1	1	168	7	3.9	6.3	192.7	0	-3,1	-	-	20	PRINCIPAL:1
ENSMUSG00000025825	Iscu	ENSMUST00000134881	ENSMUSP00000120553	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000025825	Iscu	ENSMUST00000112311	ENSMUSP00000107930	TRANSLATION	protein_coding	-	-	2	209	7	3.15	0	165.8	0	-3,1	-	-	14.886	MINOR
ENSMUSG00000025825	Iscu	ENSMUST00000123616	ENSMUSP00000117973	TRANSLATION	nonsense_mediated_decay	-	-	3	124	0	0.4	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000025825	Iscu	ENSMUST00000145592	ENSMUSP00000123237	TRANSLATION	protein_coding	stop	-	5	136	7	2.75	0	163.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000069709	ENSMUSP00000069279	TRANSLATION	protein_coding	-	CCDS19366.1	5	1100	26	10.34	0.5	268.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055923	Aasdh	ENSMUST00000154548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055923	Aasdh	ENSMUST00000142450	ENSMUSP00000121556	TRANSLATION	protein_coding	stop	-	2	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000123059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055923	Aasdh	ENSMUST00000120963	ENSMUSP00000113792	TRANSLATION	protein_coding	-	CCDS19366.1	1	1100	26	10.34	0.5	268.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055923	Aasdh	ENSMUST00000146570	ENSMUSP00000117639	TRANSLATION	protein_coding	stop	-	1	645	26	6.98	0	196.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000135697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055923	Aasdh	ENSMUST00000149602	ENSMUSP00000117489	TRANSLATION	protein_coding	start/stop	-	3	212	0	2.12	0	54.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000145022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055923	Aasdh	ENSMUST00000123682	ENSMUSP00000121050	TRANSLATION	nonsense_mediated_decay	-	-	5	233	6	3.1	0	70.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000134805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055923	Aasdh	ENSMUST00000135954	ENSMUSP00000120586	TRANSLATION	protein_coding	stop	-	3	47	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055923	Aasdh	ENSMUST00000136080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055923	Aasdh	ENSMUST00000201283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055923	Aasdh	ENSMUST00000126741	ENSMUSP00000118854	TRANSLATION	nonsense_mediated_decay	-	-	1	404	19	5.18	0	153.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029486	Mrpl1	ENSMUST00000036437	ENSMUSP00000037046	TRANSLATION	protein_coding	-	CCDS19449.1	1	336	0	5.45	0.5	62.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029486	Mrpl1	ENSMUST00000117766	ENSMUSP00000112977	TRANSLATION	protein_coding	-	CCDS19449.1	5	336	0	5.45	0.5	62.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029486	Mrpl1	ENSMUST00000121477	ENSMUSP00000112451	TRANSLATION	protein_coding	-	CCDS51567.1	1	276	0	4	0.5	0	0	-4,0	-	-	3.102	MINOR
ENSMUSG00000058013	Septin11	ENSMUST00000201421	ENSMUSP00000143928	TRANSLATION	protein_coding	-	CCDS80331.1	1	431	19	9.028	9.6	330.3	0	-4,-5	-	-	20.388	ALTERNATIVE:1
ENSMUSG00000058013	Septin11	ENSMUST00000074733	ENSMUSP00000074293	TRANSLATION	protein_coding	-	CCDS51549.1	1	429	19	9.028	11.8	330.3	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000058013	Septin11	ENSMUST00000201695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058013	Septin11	ENSMUST00000202217	ENSMUSP00000144235	TRANSLATION	protein_coding	-	CCDS84906.1	5	432	19	9.028	9.6	330.3	0	-4,-5	-	-	20.388	ALTERNATIVE:1
ENSMUSG00000058013	Septin11	ENSMUST00000202196	ENSMUSP00000144573	TRANSLATION	protein_coding	stop	-	5	204	14	4.5	0	229	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058013	Septin11	ENSMUST00000201377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058013	Septin11	ENSMUST00000201700	ENSMUSP00000143901	TRANSLATION	protein_coding	-	-	2	425	19	9.028	8.3	330.3	0	-4,-5	-	-	20.028	ALTERNATIVE:1
ENSMUSG00000058013	Septin11	ENSMUST00000202308	ENSMUSP00000144136	TRANSLATION	protein_coding	-	CCDS80332.1	5	425	19	9.028	10.8	330.3	0	-4,-5	-	-	20.721	ALTERNATIVE:1
ENSMUSG00000058013	Septin11	ENSMUST00000202415	ENSMUSP00000144360	TRANSLATION	protein_coding	stop	-	3	97	7	2.33	0	41.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095557	Gm3415	ENSMUST00000110595	ENSMUSP00000106225	TRANSLATION	protein_coding	-	-	5	307	0	0	0.5	28.7	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000095557	Gm3415	ENSMUST00000179214	ENSMUSP00000136434	TRANSLATION	protein_coding	-	CCDS85007.1	5	315	0	0	0.5	28.7	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000054434	Tmem120b	ENSMUST00000160489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054434	Tmem120b	ENSMUST00000161660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054434	Tmem120b	ENSMUST00000067505	ENSMUSP00000068551	TRANSLATION	protein_coding	-	CCDS39262.1	1	339	0	0	7.5	516.9	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000054434	Tmem120b	ENSMUST00000160344	ENSMUSP00000124971	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	94.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000054434	Tmem120b	ENSMUST00000161049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054434	Tmem120b	ENSMUST00000162104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054434	Tmem120b	ENSMUST00000111619	ENSMUSP00000107246	TRANSLATION	protein_coding	-	-	1	300	0	0	0	407.5	6	-4,-5	-	-	0	MINOR
ENSMUSG00000054434	Tmem120b	ENSMUST00000161059	ENSMUSP00000124358	TRANSLATION	nonsense_mediated_decay	-	-	5	109	0	0	0	89.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001847	Rac1	ENSMUST00000145709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001847	Rac1	ENSMUST00000131513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001847	Rac1	ENSMUST00000100489	ENSMUSP00000098058	TRANSLATION	protein_coding	-	CCDS84993.1	1	211	24	5.5	10.8	171.3	0	-4,-6	-	-	19.006	MINOR
ENSMUSG00000001847	Rac1	ENSMUST00000080537	ENSMUSP00000079380	TRANSLATION	protein_coding	-	CCDS19843.1	1	192	24	5	21.5	186.4	0	-4,-5	-	-	20.998	PRINCIPAL:1
ENSMUSG00000029110	Rnf4	ENSMUST00000183265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029110	Rnf4	ENSMUST00000182772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029110	Rnf4	ENSMUST00000182582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029110	Rnf4	ENSMUST00000182709	ENSMUSP00000138555	TRANSLATION	protein_coding	-	CCDS57336.1	1	194	8	2.06	1.5	41.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029110	Rnf4	ENSMUST00000181991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029110	Rnf4	ENSMUST00000183071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029110	Rnf4	ENSMUST00000181999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029110	Rnf4	ENSMUST00000030992	ENSMUSP00000030992	TRANSLATION	protein_coding	-	CCDS57336.1	1	194	8	2.06	1.5	41.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029110	Rnf4	ENSMUST00000182583	ENSMUSP00000138594	TRANSLATION	protein_coding	stop	-	5	115	0	0.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029110	Rnf4	ENSMUST00000182970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029110	Rnf4	ENSMUST00000182047	ENSMUSP00000138411	TRANSLATION	protein_coding	-	CCDS57336.1	1	194	8	2.06	1.5	41.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029110	Rnf4	ENSMUST00000182810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006143	Upk3bl	ENSMUST00000139549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006143	Upk3bl	ENSMUST00000122979	ENSMUSP00000122206	TRANSLATION	nonsense_mediated_decay	start	-	3	119	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000006143	Upk3bl	ENSMUST00000156530	ENSMUSP00000123311	TRANSLATION	protein_coding	start	-	1	295	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000006143	Upk3bl	ENSMUST00000006303	ENSMUSP00000006303	TRANSLATION	protein_coding	-	CCDS51665.1	1	250	0	0	1.5	0	3	2,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000006143	Upk3bl	ENSMUST00000139999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006143	Upk3bl	ENSMUST00000111137	ENSMUSP00000106767	TRANSLATION	protein_coding	-	-	1	314	0	0	0	0	3	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029196	Tada2b	ENSMUST00000031097	ENSMUSP00000031097	TRANSLATION	protein_coding	-	CCDS51478.1	2	420	8	0.4	11.3	40.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029196	Tada2b	ENSMUST00000119916	ENSMUSP00000114124	TRANSLATION	protein_coding	-	-	5	345	2	0	0	0	0	-4,-5	-	-	1.5	MINOR
ENSMUSG00000029716	Tfr2	ENSMUST00000198866	ENSMUSP00000142720	TRANSLATION	protein_coding	-	CCDS39333.1	1	798	5	10.77	1.5	88.4	1	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000029716	Tfr2	ENSMUST00000198783	ENSMUSP00000142502	TRANSLATION	protein_coding	-	CCDS39333.1	1	798	5	10.77	1.5	88.4	1	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000029716	Tfr2	ENSMUST00000196375	ENSMUSP00000142731	TRANSLATION	protein_coding	start	-	3	123	0	1.56	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029716	Tfr2	ENSMUST00000031729	ENSMUSP00000031729	TRANSLATION	protein_coding	-	CCDS39333.1	1	798	5	10.77	1.5	88.4	1	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000029716	Tfr2	ENSMUST00000196471	ENSMUSP00000142814	TRANSLATION	protein_coding	-	CCDS39333.1	1	798	5	10.77	1.5	88.4	1	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000029716	Tfr2	ENSMUST00000196450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029716	Tfr2	ENSMUST00000197705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029716	Tfr2	ENSMUST00000200190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029716	Tfr2	ENSMUST00000199957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029716	Tfr2	ENSMUST00000199069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029716	Tfr2	ENSMUST00000199054	ENSMUSP00000142478	TRANSLATION	protein_coding	-	CCDS39333.1	1	798	5	10.77	1.5	88.4	1	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000023348	Trip6	ENSMUST00000197816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023348	Trip6	ENSMUST00000199121	ENSMUSP00000143687	TRANSLATION	protein_coding	-	-	3	38	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000023348	Trip6	ENSMUST00000024119	ENSMUSP00000024119	TRANSLATION	protein_coding	-	CCDS19765.1	1	480	23	2.76	2.7	121.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000023348	Trip6	ENSMUST00000199564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056014	A430033K04Rik	ENSMUST00000032590	ENSMUSP00000032590	TRANSLATION	protein_coding	-	-	5	122	0	1	0	84.3	0	0,-5	-	-	2.502	MINOR
ENSMUSG00000056014	A430033K04Rik	ENSMUST00000069862	ENSMUSP00000067316	TRANSLATION	protein_coding	-	-	1	680	35	2.4	0.5	238.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056014	A430033K04Rik	ENSMUST00000198958	ENSMUSP00000142904	TRANSLATION	protein_coding	-	-	1	649	30	1.4	0	195.2	0	-4,-7	-	-	9.576	MINOR
ENSMUSG00000056014	A430033K04Rik	ENSMUST00000200521	ENSMUSP00000143566	TRANSLATION	protein_coding	-	-	1	102	0	1	0	84.3	0	-4,-7	-	-	2.502	MINOR
ENSMUSG00000029312	Klhl8	ENSMUST00000131843	ENSMUSP00000117671	TRANSLATION	nonsense_mediated_decay	-	-	5	115	0	0.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029312	Klhl8	ENSMUST00000147184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029312	Klhl8	ENSMUST00000112811	ENSMUSP00000108430	TRANSLATION	protein_coding	-	-	5	446	0	6.9	0	260.6	0	-4,-2	-	-	2.4	MINOR
ENSMUSG00000029312	Klhl8	ENSMUST00000112815	ENSMUSP00000108434	TRANSLATION	protein_coding	-	-	5	553	0	7.7	0	360.3	0	-4,-7	-	-	4.86	MINOR
ENSMUSG00000029312	Klhl8	ENSMUST00000031254	ENSMUSP00000031254	TRANSLATION	protein_coding	-	CCDS19479.1	1	629	0	8.7	0.5	446	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029681	Bcl7b	ENSMUST00000145329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029681	Bcl7b	ENSMUST00000202606	ENSMUSP00000144538	TRANSLATION	protein_coding	stop	-	5	146	0	0	0	42.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029681	Bcl7b	ENSMUST00000111188	ENSMUSP00000106819	TRANSLATION	protein_coding	-	-	5	145	0	0	2.4	101.8	0	-4,-7	-	-	6.561	MINOR
ENSMUSG00000029681	Bcl7b	ENSMUST00000031692	ENSMUSP00000031692	TRANSLATION	protein_coding	-	CCDS51660.1	1	202	0	0	8.5	101.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029681	Bcl7b	ENSMUST00000111187	ENSMUSP00000106818	TRANSLATION	protein_coding	-	-	1	58	0	0	0	101.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000029201	Ugdh	ENSMUST00000125375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029201	Ugdh	ENSMUST00000131263	ENSMUSP00000118999	TRANSLATION	protein_coding	stop	-	5	156	20	3	0	157.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029201	Ugdh	ENSMUST00000139402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029201	Ugdh	ENSMUST00000031103	ENSMUSP00000031103	TRANSLATION	protein_coding	-	CCDS19308.1	1	493	43	11	11	325.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015950	Ncf1	ENSMUST00000144086	ENSMUSP00000138547	TRANSLATION	protein_coding	-	-	2	377	0	8.65	0	241.8	0	-4,-6	-	-	5.958	MINOR
ENSMUSG00000015950	Ncf1	ENSMUST00000139249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015950	Ncf1	ENSMUST00000146354	ENSMUSP00000138121	TRANSLATION	nonsense_mediated_decay	-	-	1	390	0	9.65	1.5	309.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015950	Ncf1	ENSMUST00000111275	ENSMUSP00000106906	TRANSLATION	protein_coding	-	CCDS39298.1	1	390	0	9.65	1.5	309.2	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000015950	Ncf1	ENSMUST00000126934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015950	Ncf1	ENSMUST00000016094	ENSMUSP00000016094	TRANSLATION	protein_coding	-	CCDS71674.1	1	404	0	9.65	0.5	309.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000015950	Ncf1	ENSMUST00000182626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029352	Crybb3	ENSMUST00000140352	ENSMUSP00000121929	TRANSLATION	protein_coding	stop	-	3	119	0	2.45	0	75.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029352	Crybb3	ENSMUST00000076069	ENSMUSP00000075440	TRANSLATION	protein_coding	-	CCDS19547.1	1	211	0	4.7	10.8	193	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029352	Crybb3	ENSMUST00000155042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029352	Crybb3	ENSMUST00000131708	ENSMUSP00000115758	TRANSLATION	protein_coding	stop	-	3	79	0	1.95	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029352	Crybb3	ENSMUST00000120506	ENSMUSP00000112718	TRANSLATION	protein_coding	-	CCDS19547.1	3	211	0	4.7	10.8	193	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029352	Crybb3	ENSMUST00000118226	ENSMUSP00000112618	TRANSLATION	protein_coding	-	CCDS19547.1	3	211	0	4.7	10.8	193	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029352	Crybb3	ENSMUST00000117143	ENSMUSP00000113347	TRANSLATION	protein_coding	-	CCDS19547.1	3	211	0	4.7	10.8	193	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029352	Crybb3	ENSMUST00000136352	ENSMUSP00000121559	TRANSLATION	protein_coding	stop	-	3	65	0	1.45	0	38.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029352	Crybb3	ENSMUST00000134039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029352	Crybb3	ENSMUST00000119627	ENSMUSP00000113572	TRANSLATION	protein_coding	-	CCDS19547.1	2	211	0	4.7	10.8	193	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029352	Crybb3	ENSMUST00000153382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109713	Pvrig	ENSMUST00000211088	ENSMUSP00000147735	TRANSLATION	protein_coding	-	-	5	234	0	0	0.5	0	0	-1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000037913	Tmem156	ENSMUST00000043352	ENSMUSP00000044102	TRANSLATION	protein_coding	-	-	5	287	0	0	1	357.6	4	-1,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037913	Tmem156	ENSMUST00000212640	ENSMUSP00000148300	TRANSLATION	protein_coding	-	-	5	257	0	0	0	173.1	3	-4,-2	-	-	0	MINOR
ENSMUSG00000037913	Tmem156	ENSMUST00000203117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037913	Tmem156	ENSMUST00000212080	ENSMUSP00000148480	TRANSLATION	protein_coding	-	-	5	321	0	0	0.5	357.6	3	-4,-2	-	-	6	PRINCIPAL:5
ENSMUSG00000037913	Tmem156	ENSMUST00000212194	ENSMUSP00000148573	TRANSLATION	protein_coding	-	-	5	259	0	0	0	315.2	3	-4,-2	-	-	3.456	MINOR
ENSMUSG00000037913	Tmem156	ENSMUST00000203664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061576	Dpp6	ENSMUST00000148039	ENSMUSP00000115944	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061576	Dpp6	ENSMUST00000149678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061576	Dpp6	ENSMUST00000101471	ENSMUSP00000099012	TRANSLATION	protein_coding	-	CCDS51447.1	1	803	4	20.15	8.3	499.8	2	-4,-6	-	-	19	ALTERNATIVE:1
ENSMUSG00000061576	Dpp6	ENSMUST00000136574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061576	Dpp6	ENSMUST00000122171	ENSMUSP00000113441	TRANSLATION	protein_coding	-	CCDS51446.1	1	859	4	20.15	2.7	499.8	2	-4,0	-	-	16.699	MINOR
ENSMUSG00000061576	Dpp6	ENSMUST00000120555	ENSMUSP00000113849	TRANSLATION	protein_coding	-	CCDS57332.1	1	801	4	20.15	7.1	499.8	2	-4,-7	-	-	18.508	ALTERNATIVE:1
ENSMUSG00000061576	Dpp6	ENSMUST00000200274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061576	Dpp6	ENSMUST00000134175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061576	Dpp6	ENSMUST00000071500	ENSMUSP00000071435	TRANSLATION	protein_coding	-	CCDS19139.1	1	804	4	20.15	7.1	499.8	2	-4,-6	-	-	18.508	PRINCIPAL:3
ENSMUSG00000050822	Slc29a4	ENSMUST00000058418	ENSMUSP00000059896	TRANSLATION	protein_coding	-	CCDS39364.1	1	528	0	0	0.5	165	9	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050822	Slc29a4	ENSMUST00000198728	ENSMUSP00000142674	TRANSLATION	protein_coding	stop	-	5	107	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000092080	Vmn2r16	ENSMUST00000232912	ENSMUSP00000156750	TRANSLATION	protein_coding	-	-	-	897	4	2.82	0	379	7	0,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000092080	Vmn2r16	ENSMUST00000165180	ENSMUSP00000127838	TRANSLATION	protein_coding	-	CCDS51602.1	5	850	4	2.82	0.5	379	7	0,-3	-	-	16	PRINCIPAL:2
ENSMUSG00000057614	Gnai1	ENSMUST00000074694	ENSMUSP00000074259	TRANSLATION	protein_coding	-	CCDS39018.1	1	354	24	7.5	21.5	420.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000067010	Vmn2r10	ENSMUST00000233053	ENSMUSP00000156484	TRANSLATION	protein_coding	-	-	-	563	2	2.698	0	146.3	0	2,-2	-	-	5.078	MINOR
ENSMUSG00000067010	Vmn2r10	ENSMUST00000079163	ENSMUSP00000078162	TRANSLATION	protein_coding	-	CCDS51596.1	5	847	4	4.158	0.5	364.2	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000067010	Vmn2r10	ENSMUST00000176594	ENSMUSP00000135274	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	0.2	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000067010	Vmn2r10	ENSMUST00000232815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001260	Gabrg1	ENSMUST00000031119	ENSMUSP00000031119	TRANSLATION	protein_coding	-	CCDS19326.1	1	465	0	6.42	7.5	287.4	2	2,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000001260	Gabrg1	ENSMUST00000200126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001260	Gabrg1	ENSMUST00000197068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001260	Gabrg1	ENSMUST00000199705	ENSMUSP00000142454	TRANSLATION	protein_coding	start	-	1	419	0	5.42	0	205	2	2,-1	-	-	-1	MINOR
ENSMUSG00000018965	Ywhah	ENSMUST00000199651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018965	Ywhah	ENSMUST00000136667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018965	Ywhah	ENSMUST00000019109	ENSMUSP00000019109	TRANSLATION	protein_coding	-	CCDS19198.1	1	246	0	1.75	19.5	346.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000018965	Ywhah	ENSMUST00000138261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025746	Il6	ENSMUST00000195978	ENSMUSP00000143544	TRANSLATION	protein_coding	-	CCDS84856.1	1	165	0	3.066	0.5	207.1	0	1,-3	-	-	3.234	MINOR
ENSMUSG00000025746	Il6	ENSMUST00000026845	ENSMUSP00000026845	TRANSLATION	protein_coding	-	CCDS19153.1	1	211	0	4.83	1.5	294.4	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000025746	Il6	ENSMUST00000199765	ENSMUSP00000143157	TRANSLATION	protein_coding	-	-	2	194	0	4.83	0	294.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025746	Il6	ENSMUST00000199183	ENSMUSP00000143293	TRANSLATION	protein_coding	-	-	2	208	0	3	0	206.4	0	1,-3	-	-	3.06	MINOR
ENSMUSG00000029330	Cds1	ENSMUST00000031273	ENSMUSP00000031273	TRANSLATION	protein_coding	-	CCDS19472.1	1	461	0	1.59	6.3	290.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000029330	Cds1	ENSMUST00000132213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029711	Epo	ENSMUST00000111038	ENSMUSP00000106667	TRANSLATION	protein_coding	-	CCDS39332.1	5	192	0	3.75	1.5	222.5	0	4,-1	-	-	11.934	PRINCIPAL:3
ENSMUSG00000029711	Epo	ENSMUST00000111039	ENSMUSP00000106668	TRANSLATION	protein_coding	-	CCDS84978.1	1	191	0	3.75	1.5	223.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000029711	Epo	ENSMUST00000031723	ENSMUSP00000031723	TRANSLATION	protein_coding	-	CCDS39332.1	1	192	0	3.75	1.5	222.5	0	4,-1	-	-	11.934	PRINCIPAL:3
ENSMUSG00000008348	Ubc	ENSMUST00000136312	ENSMUSP00000114180	TRANSLATION	protein_coding	-	CCDS19684.2	1	734	0	1.4	0.5	1027.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000008348	Ubc	ENSMUST00000156249	ENSMUSP00000115578	TRANSLATION	protein_coding	-	CCDS19684.2	2	734	0	1.4	0.5	1027.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000008348	Ubc	ENSMUST00000108707	ENSMUSP00000104347	TRANSLATION	protein_coding	stop	-	2	201	0	1	0	304.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028962	Slc4a2	ENSMUST00000140722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028962	Slc4a2	ENSMUST00000141966	ENSMUSP00000117215	TRANSLATION	protein_coding	stop	-	2	131	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028962	Slc4a2	ENSMUST00000155598	ENSMUSP00000118473	TRANSLATION	protein_coding	stop	-	5	121	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000028962	Slc4a2	ENSMUST00000144305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028962	Slc4a2	ENSMUST00000155636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028962	Slc4a2	ENSMUST00000136440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028962	Slc4a2	ENSMUST00000080067	ENSMUSP00000078972	TRANSLATION	protein_coding	-	CCDS19119.1	1	1237	0	12.99	0.5	1041.4	11	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000028962	Slc4a2	ENSMUST00000127315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028962	Slc4a2	ENSMUST00000115049	ENSMUSP00000110701	TRANSLATION	protein_coding	-	-	5	1228	0	12.99	0.5	1041.4	11	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028962	Slc4a2	ENSMUST00000132505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028962	Slc4a2	ENSMUST00000146765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028962	Slc4a2	ENSMUST00000198786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028962	Slc4a2	ENSMUST00000153274	ENSMUSP00000121652	TRANSLATION	protein_coding	stop	-	2	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000028962	Slc4a2	ENSMUST00000139081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028962	Slc4a2	ENSMUST00000115047	ENSMUSP00000110699	TRANSLATION	protein_coding	-	-	5	1223	0	12.99	0.5	1041.4	11	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000028933	Xrcc2	ENSMUST00000030773	ENSMUSP00000030773	TRANSLATION	protein_coding	-	CCDS19135.1	1	278	7	0.6	3.9	61.3	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000028933	Xrcc2	ENSMUST00000114922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028933	Xrcc2	ENSMUST00000131308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000028933	Xrcc2	ENSMUST00000134972	ENSMUSP00000143032	TRANSLATION	protein_coding	-	-	3	41	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039959	Hip1	ENSMUST00000200808	ENSMUSP00000144429	TRANSLATION	nonsense_mediated_decay	start	-	3	109	0	1.4	0	26.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039959	Hip1	ENSMUST00000201998	ENSMUSP00000144392	TRANSLATION	protein_coding	stop	-	2	192	3	2.3	0	178.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039959	Hip1	ENSMUST00000200898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039959	Hip1	ENSMUST00000202236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039959	Hip1	ENSMUST00000201479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039959	Hip1	ENSMUST00000212301	ENSMUSP00000148842	TRANSLATION	protein_coding	-	-	5	402	3	4.995	0	269.5	0	-4,-6	-	-	3	MINOR
ENSMUSG00000039959	Hip1	ENSMUST00000202643	ENSMUSP00000144086	TRANSLATION	protein_coding	start	-	1	618	0	9.8	0	263.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039959	Hip1	ENSMUST00000202095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039959	Hip1	ENSMUST00000202044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039959	Hip1	ENSMUST00000060311	ENSMUSP00000059033	TRANSLATION	protein_coding	-	CCDS51663.1	1	1029	3	15.295	1.5	530.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000059866	Tnip2	ENSMUST00000030991	ENSMUSP00000030991	TRANSLATION	protein_coding	-	-	1	451	4	2	0	99.9	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000059866	Tnip2	ENSMUST00000137555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059866	Tnip2	ENSMUST00000087737	ENSMUSP00000085030	TRANSLATION	protein_coding	-	CCDS19214.1	1	430	4	2	3.9	99.9	0	-4,-7	-	-	17	PRINCIPAL:2
ENSMUSG00000059866	Tnip2	ENSMUST00000143072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059866	Tnip2	ENSMUST00000114359	ENSMUSP00000109999	TRANSLATION	protein_coding	-	-	5	347	3	1	2.4	0	0	-4,-7	-	-	6.483	MINOR
ENSMUSG00000059866	Tnip2	ENSMUST00000159102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000105078	Vamp9	ENSMUST00000212249	ENSMUSP00000148268	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	0.87	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000105078	Vamp9	ENSMUST00000200398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105078	Vamp9	ENSMUST00000212164	ENSMUSP00000148462	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0.87	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000105078	Vamp9	ENSMUST00000212307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105078	Vamp9	ENSMUST00000198837	ENSMUSP00000148490	TRANSLATION	protein_coding	-	-	5	214	0	3.57	1.5	48.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045078	Rnf216	ENSMUST00000200002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045078	Rnf216	ENSMUST00000198190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045078	Rnf216	ENSMUST00000199044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045078	Rnf216	ENSMUST00000198179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045078	Rnf216	ENSMUST00000053498	ENSMUSP00000052563	TRANSLATION	protein_coding	-	CCDS80455.1	1	853	22	1.87	0.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045078	Rnf216	ENSMUST00000197296	ENSMUSP00000143242	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045078	Rnf216	ENSMUST00000200607	ENSMUSP00000143705	TRANSLATION	protein_coding	-	CCDS57400.1	1	910	22	1.87	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000045078	Rnf216	ENSMUST00000197217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045078	Rnf216	ENSMUST00000200430	ENSMUSP00000142355	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037344	Slc12a9	ENSMUST00000141517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037344	Slc12a9	ENSMUST00000149847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037344	Slc12a9	ENSMUST00000039991	ENSMUSP00000038106	TRANSLATION	protein_coding	-	CCDS19766.1	1	914	0	0	0.5	416.4	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037344	Slc12a9	ENSMUST00000156646	ENSMUSP00000117757	TRANSLATION	protein_coding	stop	-	5	60	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029238	Clock	ENSMUST00000201052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029238	Clock	ENSMUST00000202857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029238	Clock	ENSMUST00000202122	ENSMUSP00000144022	TRANSLATION	protein_coding	-	CCDS84889.1	1	854	0	9.95	0.5	141.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029238	Clock	ENSMUST00000200957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029238	Clock	ENSMUST00000202651	ENSMUSP00000143939	TRANSLATION	protein_coding	-	CCDS19360.1	2	855	0	9.95	0.5	141.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029238	Clock	ENSMUST00000075159	ENSMUSP00000074656	TRANSLATION	protein_coding	-	CCDS19360.1	1	855	0	9.95	0.5	141.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000086900	ENSMUSP00000084114	TRANSLATION	nonsense_mediated_decay	-	-	5	420	0	3.8	8.8	113.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000135424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000151323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000128187	ENSMUSP00000121005	TRANSLATION	protein_coding	-	CCDS19460.2	1	420	0	3.8	8.8	113.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000153442	ENSMUSP00000118555	TRANSLATION	protein_coding	start	-	1	323	0	3.8	0	113.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000141337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029328	Hnrnpdl	ENSMUST00000149384	ENSMUSP00000117589	TRANSLATION	nonsense_mediated_decay	start	-	5	100	0	0.4	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000006638	Abhd1	ENSMUST00000006814	ENSMUSP00000158592	TRANSLATION	protein_coding	-	-	5	412	5	0	1	47.6	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000006638	Abhd1	ENSMUST00000201125	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000036586	Grifin	ENSMUST00000042993	ENSMUSP00000039263	TRANSLATION	protein_coding	-	CCDS39357.1	1	144	8	2.08	5.1	105.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000054256	Msi1	ENSMUST00000151444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054256	Msi1	ENSMUST00000145840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054256	Msi1	ENSMUST00000136586	ENSMUSP00000143900	TRANSLATION	protein_coding	stop	-	5	196	0	2.85	0	54.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054256	Msi1	ENSMUST00000130849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054256	Msi1	ENSMUST00000139918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054256	Msi1	ENSMUST00000145005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054256	Msi1	ENSMUST00000067168	ENSMUSP00000070415	TRANSLATION	protein_coding	start	-	5	325	0	5.18	0	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054256	Msi1	ENSMUST00000150779	ENSMUSP00000120516	TRANSLATION	protein_coding	-	CCDS19591.1	1	362	0	5.96	7.5	113.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000054256	Msi1	ENSMUST00000131079	ENSMUSP00000144032	TRANSLATION	protein_coding	start/stop	-	5	269	0	5.18	0	99.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029544	Cabp1	ENSMUST00000112113	ENSMUSP00000107741	TRANSLATION	protein_coding	-	CCDS80379.1	1	350	16	3.66	1.5	95.3	0	-4,-6	-	-	16.926	MINOR
ENSMUSG00000029544	Cabp1	ENSMUST00000201900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029544	Cabp1	ENSMUST00000151775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029544	Cabp1	ENSMUST00000145197	ENSMUSP00000138183	TRANSLATION	nonsense_mediated_decay	-	-	2	85	0	0.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029544	Cabp1	ENSMUST00000112109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029544	Cabp1	ENSMUST00000112112	ENSMUSP00000107740	TRANSLATION	protein_coding	-	CCDS80378.1	1	167	16	4.16	12.9	95.3	0	-4,-7	-	-	21.76	ALTERNATIVE:1
ENSMUSG00000029544	Cabp1	ENSMUST00000031519	ENSMUSP00000031519	TRANSLATION	protein_coding	-	CCDS19582.1	1	227	16	4.28	12.8	95.3	0	-4,-2	-	-	21.968	PRINCIPAL:3
ENSMUSG00000029168	Dpysl5	ENSMUST00000101442	ENSMUSP00000098985	TRANSLATION	protein_coding	-	-	1	97	1	1	0	0	0	-4,-5	-	-	0.75	MINOR
ENSMUSG00000029168	Dpysl5	ENSMUST00000088081	ENSMUSP00000085400	TRANSLATION	protein_coding	-	CCDS39047.1	1	564	8	10.75	15.3	77.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029168	Dpysl5	ENSMUST00000198503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029168	Dpysl5	ENSMUST00000127365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029168	Dpysl5	ENSMUST00000136657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029168	Dpysl5	ENSMUST00000114729	ENSMUSP00000110377	TRANSLATION	protein_coding	-	CCDS39047.1	1	564	8	10.75	15.3	77.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029168	Dpysl5	ENSMUST00000138625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053094	Tmem248	ENSMUST00000200802	ENSMUSP00000144363	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	110.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000053094	Tmem248	ENSMUST00000111298	ENSMUSP00000106929	TRANSLATION	protein_coding	-	CCDS39295.1	1	314	0	0	14.8	278.8	2	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000053094	Tmem248	ENSMUST00000065329	ENSMUSP00000067501	TRANSLATION	protein_coding	-	CCDS39295.1	5	314	0	0	14.8	278.8	2	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000053094	Tmem248	ENSMUST00000202305	ENSMUSP00000144452	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	151.7	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000053094	Tmem248	ENSMUST00000202612	ENSMUSP00000144653	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029620	1700018F24Rik	ENSMUST00000031624	ENSMUSP00000031624	TRANSLATION	protein_coding	-	CCDS51696.1	1	314	0	0	0.5	32.4	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000051034	Zfp11	ENSMUST00000049778	ENSMUSP00000051861	TRANSLATION	protein_coding	-	CCDS39291.1	1	647	87	0.4	1.5	423.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029275	Gfi1	ENSMUST00000031205	ENSMUSP00000135884	TRANSLATION	protein_coding	-	CCDS57371.1	1	423	23	3	1.5	122	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000029275	Gfi1	ENSMUST00000065478	ENSMUSP00000135039	TRANSLATION	protein_coding	-	CCDS59680.1	1	489	23	3	0.5	122	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000029275	Gfi1	ENSMUST00000159263	ENSMUSP00000135880	TRANSLATION	protein_coding	stop	-	3	186	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029275	Gfi1	ENSMUST00000159164	ENSMUSP00000137229	TRANSLATION	protein_coding	-	CCDS57371.1	1	423	23	3	1.5	122	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000029634	Rnf6	ENSMUST00000161725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029634	Rnf6	ENSMUST00000169407	ENSMUSP00000128774	TRANSLATION	protein_coding	-	CCDS19868.1	2	667	8	0	0.5	42.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029634	Rnf6	ENSMUST00000161574	ENSMUSP00000123730	TRANSLATION	protein_coding	stop	-	5	188	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029634	Rnf6	ENSMUST00000067837	ENSMUSP00000067559	TRANSLATION	protein_coding	-	CCDS19868.1	1	667	8	0	0.5	42.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029634	Rnf6	ENSMUST00000161331	ENSMUSP00000125611	TRANSLATION	protein_coding	stop	-	2	167	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029634	Rnf6	ENSMUST00000159074	ENSMUSP00000123926	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029634	Rnf6	ENSMUST00000162219	ENSMUSP00000123708	TRANSLATION	protein_coding	start/stop	-	3	271	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029634	Rnf6	ENSMUST00000161859	ENSMUSP00000124293	TRANSLATION	protein_coding	-	CCDS19868.1	1	667	8	0	0.5	42.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050022	Amz1	ENSMUST00000126975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050022	Amz1	ENSMUST00000155644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050022	Amz1	ENSMUST00000177057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050022	Amz1	ENSMUST00000060918	ENSMUSP00000053110	TRANSLATION	protein_coding	-	CCDS19824.1	1	502	7	0	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050022	Amz1	ENSMUST00000156006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050022	Amz1	ENSMUST00000176035	ENSMUSP00000135504	TRANSLATION	nonsense_mediated_decay	start	-	2	202	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000050022	Amz1	ENSMUST00000120630	ENSMUSP00000113911	TRANSLATION	protein_coding	-	CCDS19824.1	1	502	7	0	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000004814	Ccl24	ENSMUST00000004936	ENSMUSP00000004936	TRANSLATION	protein_coding	-	CCDS19742.1	1	119	0	1.8	5.1	69.5	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000004814	Ccl24	ENSMUST00000201401	ENSMUSP00000144002	TRANSLATION	protein_coding	-	CCDS19742.1	1	119	0	1.8	5.1	69.5	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000042605	Atxn2	ENSMUST00000162459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000225761	ENSMUSP00000153566	TRANSLATION	protein_coding	stop	-	-	402	0	0	0	137.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000200499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000199451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000160813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042605	Atxn2	ENSMUST00000161433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000159928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000161064	ENSMUSP00000124070	TRANSLATION	protein_coding	start	-	5	929	0	0	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000160821	ENSMUSP00000125647	TRANSLATION	protein_coding	start/stop	-	5	330	0	0	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000159828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000160220	ENSMUSP00000124059	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000162327	ENSMUSP00000123784	TRANSLATION	protein_coding	start	-	5	662	0	0	0	27	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000051950	ENSMUSP00000056715	TRANSLATION	protein_coding	-	CCDS39250.1	1	1286	0	0	0.5	164.5	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000042605	Atxn2	ENSMUST00000161872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000162611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042605	Atxn2	ENSMUST00000161159	ENSMUSP00000123833	TRANSLATION	protein_coding	start	-	3	234	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000161836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042605	Atxn2	ENSMUST00000160462	ENSMUSP00000124092	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000199864	ENSMUSP00000142984	TRANSLATION	protein_coding	start	-	3	64	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042605	Atxn2	ENSMUST00000160093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035898	Uba6	ENSMUST00000147734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035898	Uba6	ENSMUST00000039373	ENSMUSP00000035328	TRANSLATION	protein_coding	-	CCDS19378.1	1	1053	19	21.295	2.7	779.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035898	Uba6	ENSMUST00000113373	ENSMUSP00000109000	TRANSLATION	protein_coding	-	-	1	1022	19	21.295	0	779.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000029279	Brdt	ENSMUST00000112677	ENSMUSP00000108297	TRANSLATION	protein_coding	-	CCDS39197.1	1	326	0	4	1.5	95	0	-4,-7	-	-	2.802	MINOR
ENSMUSG00000029279	Brdt	ENSMUST00000161377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029279	Brdt	ENSMUST00000162804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029279	Brdt	ENSMUST00000031215	ENSMUSP00000031215	TRANSLATION	protein_coding	-	CCDS19500.1	1	956	0	5.6	0.5	316.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079424	Gm3259	ENSMUST00000185432	ENSMUSP00000141099	TRANSLATION	protein_coding	stop	-	3	359	0	0	0.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079424	Gm3259	ENSMUST00000160090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079424	Gm3259	ENSMUST00000101015	ENSMUSP00000098577	TRANSLATION	protein_coding	-	CCDS57363.1	1	475	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:2
ENSMUSG00000079424	Gm3259	ENSMUST00000160045	ENSMUSP00000124254	TRANSLATION	protein_coding	-	-	1	278	2	0	0.5	0	0	-4,-7	-	-	2	ALTERNATIVE:2
ENSMUSG00000079424	Gm3259	ENSMUST00000161225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041548	Hspb8	ENSMUST00000036991	ENSMUSP00000037007	TRANSLATION	protein_coding	-	CCDS19600.1	1	196	0	1.85	7.5	62.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000041548	Hspb8	ENSMUST00000133335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041298	Katnal1	ENSMUST00000110508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041298	Katnal1	ENSMUST00000110509	ENSMUSP00000106136	TRANSLATION	protein_coding	stop	-	5	234	3	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041298	Katnal1	ENSMUST00000152360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041298	Katnal1	ENSMUST00000149169	ENSMUSP00000120707	TRANSLATION	protein_coding	stop	-	2	153	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041298	Katnal1	ENSMUST00000047257	ENSMUSP00000043210	TRANSLATION	protein_coding	-	CCDS39404.1	1	488	13	7.26	13	166.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000041298	Katnal1	ENSMUST00000139269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029446	Psph	ENSMUST00000201022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029446	Psph	ENSMUST00000178244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029446	Psph	ENSMUST00000201394	ENSMUSP00000144667	TRANSLATION	protein_coding	stop	-	3	113	8	3.25	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029446	Psph	ENSMUST00000202374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029446	Psph	ENSMUST00000136280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029446	Psph	ENSMUST00000118268	ENSMUSP00000113671	TRANSLATION	protein_coding	-	-	5	101	6	2.566	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029446	Psph	ENSMUST00000031399	ENSMUSP00000031399	TRANSLATION	protein_coding	-	CCDS19699.1	1	225	15	6.08	12.8	59.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029446	Psph	ENSMUST00000136507	ENSMUSP00000116292	TRANSLATION	protein_coding	stop	-	5	60	6	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038780	Smurf1	ENSMUST00000110677	ENSMUSP00000106305	TRANSLATION	protein_coding	-	-	5	757	5	14.6	5.1	463.6	0	-4,-2	-	-	18.18	MINOR
ENSMUSG00000038780	Smurf1	ENSMUST00000100461	ENSMUSP00000098029	TRANSLATION	protein_coding	-	CCDS39381.1	1	728	5	14.6	14.1	464.8	0	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000038780	Smurf1	ENSMUST00000126822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038780	Smurf1	ENSMUST00000198621	ENSMUSP00000142841	TRANSLATION	protein_coding	start/stop	-	5	309	3	4.75	0	103.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038780	Smurf1	ENSMUST00000085684	ENSMUSP00000082827	TRANSLATION	protein_coding	-	CCDS39380.1	1	731	5	14.6	12.1	463.6	0	-4,-2	-	-	20.316	PRINCIPAL:4
ENSMUSG00000079362	Gm43302	ENSMUST00000050011	ENSMUSP00000062528	TRANSLATION	protein_coding,RT	-	-	1	611	16	8.8	0.5	768.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000043059	Zfp513	ENSMUST00000201968	ENSMUSP00000144517	TRANSLATION	protein_coding	start	-	1	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043059	Zfp513	ENSMUST00000202929	ENSMUSP00000143817	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043059	Zfp513	ENSMUST00000201231	ENSMUSP00000144172	TRANSLATION	protein_coding	stop	-	5	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043059	Zfp513	ENSMUST00000114590	ENSMUSP00000110238	TRANSLATION	protein_coding	-	CCDS19178.2	1	541	32	2.4	7.5	87.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000043059	Zfp513	ENSMUST00000031562	ENSMUSP00000031562	TRANSLATION	protein_coding	-	CCDS51458.1	1	539	32	2.4	0.5	87.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000043059	Zfp513	ENSMUST00000200992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043059	Zfp513	ENSMUST00000201078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043059	Zfp513	ENSMUST00000201119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029155	Spata18	ENSMUST00000071077	ENSMUSP00000064308	TRANSLATION	protein_coding	-	CCDS57351.1	5	537	0	0	0.5	217.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000029155	Spata18	ENSMUST00000178631	ENSMUSP00000137444	TRANSLATION	protein_coding	start	-	1	435	0	0	0	217.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029155	Spata18	ENSMUST00000113548	ENSMUSP00000109176	TRANSLATION	protein_coding	-	-	5	212	0	0	0	217.4	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000029155	Spata18	ENSMUST00000041422	ENSMUSP00000040922	TRANSLATION	non_stop_decay	stop	-	1	487	0	0	0	217.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063406	Tmed5	ENSMUST00000119437	ENSMUSP00000112406	TRANSLATION	protein_coding	-	-	1	162	0	3	0	91.7	0	3,-2	-	-	7.74	MINOR
ENSMUSG00000063406	Tmed5	ENSMUST00000118036	ENSMUSP00000113922	TRANSLATION	protein_coding	-	-	1	100	0	2	0.5	49.4	0	3,-2	-	-	4.002	MINOR
ENSMUSG00000063406	Tmed5	ENSMUST00000002837	ENSMUSP00000002837	TRANSLATION	protein_coding	-	CCDS19508.1	1	229	0	3	5.1	162.7	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000063406	Tmed5	ENSMUST00000117759	ENSMUSP00000112612	TRANSLATION	protein_coding	-	CCDS84924.1	1	100	0	2	0.5	51.2	0	3,-2	-	-	4.002	MINOR
ENSMUSG00000063406	Tmed5	ENSMUST00000061203	ENSMUSP00000056449	TRANSLATION	protein_coding	-	-	1	126	0	2	0	49.4	0	3,-2	-	-	4.002	MINOR
ENSMUSG00000063406	Tmed5	ENSMUST00000119784	ENSMUSP00000113422	TRANSLATION	protein_coding	-	-	2	96	0	2	0.5	49.1	0	3,-2	-	-	4.002	MINOR
ENSMUSG00000047182	Irs3	ENSMUST00000057314	ENSMUSP00000060844	TRANSLATION	protein_coding	-	CCDS19773.1	1	495	0	0.96	0.5	89.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000047182	Irs3	ENSMUST00000196511	ENSMUSP00000142730	TRANSLATION	protein_coding	-	-	1	362	0	0.96	0	89.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000070858	Gm1673	ENSMUST00000206020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070858	Gm1673	ENSMUST00000114383	ENSMUSP00000110025	TRANSLATION	protein_coding	-	CCDS80261.1	1	90	0	0	0.5	136	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000070858	Gm1673	ENSMUST00000142510	ENSMUSP00000119566	TRANSLATION	nonsense_mediated_decay	start	-	3	87	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000070858	Gm1673	ENSMUST00000114382	ENSMUSP00000110024	TRANSLATION	protein_coding	-	CCDS80261.1	2	90	0	0	0.5	136	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000070858	Gm1673	ENSMUST00000094869	ENSMUSP00000092467	TRANSLATION	protein_coding	-	CCDS19209.2	1	137	0	0	0.5	136	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000029103	Lrpap1	ENSMUST00000132754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029103	Lrpap1	ENSMUST00000147028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029103	Lrpap1	ENSMUST00000152028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029103	Lrpap1	ENSMUST00000030986	ENSMUSP00000030986	TRANSLATION	protein_coding	-	CCDS19225.1	1	360	0	8.63	1.5	373.2	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000029103	Lrpap1	ENSMUST00000153664	ENSMUSP00000120233	TRANSLATION	protein_coding	start	-	3	153	0	4	0	150	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049530	Clrn2	ENSMUST00000053250	ENSMUSP00000058204	TRANSLATION	protein_coding	-	CCDS51497.1	1	232	0	0	12.8	0	0	2,-3	-	-	4	PRINCIPAL:1
ENSMUSG00000091255	Speer4e	ENSMUST00000159973	ENSMUSP00000125587	TRANSLATION	protein_coding	-	CCDS51417.1	5	255	0	0	0.5	98.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000104824	Gm21663	ENSMUST00000196214	ENSMUSP00000142577	TRANSLATION	protein_coding	-	-	5	267	0	0	0.5	83.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000057068	Fam47e	ENSMUST00000149617	ENSMUSP00000121392	TRANSLATION	nonsense_mediated_decay	start	-	3	44	3	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057068	Fam47e	ENSMUST00000131166	ENSMUSP00000118033	TRANSLATION	protein_coding	-	CCDS19432.2	1	260	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057068	Fam47e	ENSMUST00000176448	ENSMUSP00000135051	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057068	Fam47e	ENSMUST00000176621	ENSMUSP00000135365	TRANSLATION	protein_coding	-	-	3	121	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057068	Fam47e	ENSMUST00000175974	ENSMUSP00000135200	TRANSLATION	protein_coding	-	-	1	58	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057068	Fam47e	ENSMUST00000146417	ENSMUSP00000115229	TRANSLATION	protein_coding	-	-	5	402	0	0	0.5	98	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057068	Fam47e	ENSMUST00000082382	ENSMUSP00000080987	TRANSLATION	protein_coding	-	CCDS51548.1	5	199	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000029636	Wasf3	ENSMUST00000016143	ENSMUSP00000016143	TRANSLATION	protein_coding	-	CCDS19870.1	1	501	0	5.25	6.3	28.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029636	Wasf3	ENSMUST00000238592	ENSMUSP00000158806	TRANSLATION	protein_coding	start/stop	-	-	177	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029407	Uso1	ENSMUST00000201380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029407	Uso1	ENSMUST00000201642	ENSMUSP00000144165	TRANSLATION	nonsense_mediated_decay	-	-	1	74	0	1.7	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029407	Uso1	ENSMUST00000031355	ENSMUSP00000031355	TRANSLATION	protein_coding	-	CCDS39150.1	1	959	0	15.83	0.5	36.9	0	-4,-6	-	-	11.16	PRINCIPAL:2
ENSMUSG00000029407	Uso1	ENSMUST00000202362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029407	Uso1	ENSMUST00000202155	ENSMUSP00000144592	TRANSLATION	protein_coding	-	-	1	897	0	15.83	0	42.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000029265	Dr1	ENSMUST00000154862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029265	Dr1	ENSMUST00000031190	ENSMUSP00000031190	TRANSLATION	protein_coding	-	CCDS19509.1	1	176	0	3	16.2	80.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029130	Rnf32	ENSMUST00000160051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029130	Rnf32	ENSMUST00000001247	ENSMUSP00000001247	TRANSLATION	protein_coding	-	CCDS39041.1	1	368	15	0	0.5	84.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029130	Rnf32	ENSMUST00000160888	ENSMUSP00000124499	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029130	Rnf32	ENSMUST00000162975	ENSMUSP00000123952	TRANSLATION	protein_coding	start	-	3	275	15	0	0	84.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029130	Rnf32	ENSMUST00000160246	ENSMUSP00000124657	TRANSLATION	protein_coding	-	CCDS39041.1	1	368	15	0	0.5	84.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029130	Rnf32	ENSMUST00000160383	ENSMUSP00000125515	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029130	Rnf32	ENSMUST00000161398	ENSMUSP00000125741	TRANSLATION	protein_coding	stop	-	3	123	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029130	Rnf32	ENSMUST00000163050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029130	Rnf32	ENSMUST00000168460	ENSMUSP00000132213	TRANSLATION	protein_coding	-	CCDS39041.1	1	368	15	0	0.5	84.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029130	Rnf32	ENSMUST00000159272	ENSMUSP00000124537	TRANSLATION	protein_coding	stop	-	2	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029130	Rnf32	ENSMUST00000160887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029130	Rnf32	ENSMUST00000198669	ENSMUSP00000144394	TRANSLATION	protein_coding	stop	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029273	Sult1d1	ENSMUST00000113314	ENSMUSP00000108940	TRANSLATION	protein_coding	-	CCDS39130.1	1	295	20	7	5.4	310.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000029273	Sult1d1	ENSMUST00000166996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007457	2310003L06Rik	ENSMUST00000007601	ENSMUSP00000007601	TRANSLATION	protein_coding	stop	-	1	495	0	0	0	0	0	-1,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000039252	Lgi2	ENSMUST00000039750	ENSMUSP00000040436	TRANSLATION	protein_coding	-	CCDS19285.1	1	550	0	3.93	0.5	296.7	0	1,-5	-	-	11.298	PRINCIPAL:3
ENSMUSG00000039252	Lgi2	ENSMUST00000199942	ENSMUSP00000143707	TRANSLATION	protein_coding	-	CCDS80281.1	1	542	0	4.28	1.5	286	0	1,-5	-	-	11.358	ALTERNATIVE:2
ENSMUSG00000042589	Cux2	ENSMUST00000144069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042589	Cux2	ENSMUST00000133760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042589	Cux2	ENSMUST00000111752	ENSMUSP00000107381	TRANSLATION	protein_coding	-	CCDS39251.1	1	1426	0	4.1	1.5	300.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042589	Cux2	ENSMUST00000134326	ENSMUSP00000120095	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042589	Cux2	ENSMUST00000155396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042589	Cux2	ENSMUST00000168288	ENSMUSP00000130302	TRANSLATION	protein_coding	-	CCDS39251.1	5	1426	0	4.1	1.5	300.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042589	Cux2	ENSMUST00000086317	ENSMUSP00000083497	TRANSLATION	protein_coding	-	CCDS39251.1	1	1426	0	4.1	1.5	300.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042589	Cux2	ENSMUST00000197179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042589	Cux2	ENSMUST00000154139	ENSMUSP00000114948	TRANSLATION	protein_coding	stop	-	5	147	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042589	Cux2	ENSMUST00000156942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042589	Cux2	ENSMUST00000125267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048373	Fgfbp1	ENSMUST00000199894	ENSMUSP00000142520	TRANSLATION	protein_coding	-	CCDS19268.1	3	251	0	0	0.5	240.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048373	Fgfbp1	ENSMUST00000199481	ENSMUSP00000143011	TRANSLATION	protein_coding	-	CCDS19268.1	-	251	0	0	0.5	240.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048373	Fgfbp1	ENSMUST00000061299	ENSMUSP00000056900	TRANSLATION	protein_coding	-	CCDS19268.1	1	251	0	0	0.5	240.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000029535	Triap1	ENSMUST00000031508	ENSMUSP00000031508	TRANSLATION	protein_coding	-	CCDS39228.1	1	76	0	1.75	15.8	92.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029338	Antxr2	ENSMUST00000031281	ENSMUSP00000031281	TRANSLATION	protein_coding	-	CCDS39177.1	1	487	5	5.8	1.5	338.8	1	1,-4	-	-	17	PRINCIPAL:2
ENSMUSG00000029338	Antxr2	ENSMUST00000199088	ENSMUSP00000142605	TRANSLATION	protein_coding	-	-	1	517	5	5.8	0	323	1	1,-4	-	-	16.052	ALTERNATIVE:2
ENSMUSG00000029338	Antxr2	ENSMUST00000202736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033219	Gm9758	ENSMUST00000154544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033219	Gm9758	ENSMUST00000035980	ENSMUSP00000041597	TRANSLATION	protein_coding	-	CCDS51416.1	1	255	0	0	0.5	98.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091450	Vmn2r11	ENSMUST00000233971	ENSMUSP00000156848	TRANSLATION	nonsense_mediated_decay	-	-	-	578	1	2.32	0	158.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000091450	Vmn2r11	ENSMUST00000164875	ENSMUSP00000133218	TRANSLATION	protein_coding	-	CCDS51597.1	5	861	3	2.8	0.5	373.8	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000091450	Vmn2r11	ENSMUST00000233894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000085957	Syna	ENSMUST00000149604	ENSMUSP00000116437	TRANSLATION	protein_coding	-	CCDS19721.1	-	617	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000062110	Scfd2	ENSMUST00000075848	ENSMUSP00000075245	TRANSLATION	nonsense_mediated_decay	-	-	1	477	0	0	0.5	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000062110	Scfd2	ENSMUST00000151474	ENSMUSP00000121098	TRANSLATION	protein_coding	-	CCDS19345.1	1	477	0	0	0.5	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000062110	Scfd2	ENSMUST00000113542	ENSMUSP00000109170	TRANSLATION	protein_coding	-	CCDS71603.1	1	644	0	0	0.5	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000062110	Scfd2	ENSMUST00000072857	ENSMUSP00000072636	TRANSLATION	protein_coding	-	CCDS51519.1	1	684	0	0	7.5	41.1	0	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062110	Scfd2	ENSMUST00000123203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062110	Scfd2	ENSMUST00000148994	ENSMUSP00000144640	TRANSLATION	protein_coding	start	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062110	Scfd2	ENSMUST00000202465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062110	Scfd2	ENSMUST00000146015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062110	Scfd2	ENSMUST00000142216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013622	Atraid	ENSMUST00000201174	ENSMUSP00000143956	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013622	Atraid	ENSMUST00000201887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013622	Atraid	ENSMUST00000201773	ENSMUSP00000144333	TRANSLATION	protein_coding	stop	-	3	143	3	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000013622	Atraid	ENSMUST00000200800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013622	Atraid	ENSMUST00000013766	ENSMUSP00000013766	TRANSLATION	protein_coding	-	CCDS19170.1	1	223	4	0	0.5	0	1	3,-2	-	-	4	PRINCIPAL:2
ENSMUSG00000013622	Atraid	ENSMUST00000201136	ENSMUSP00000144085	TRANSLATION	protein_coding	-	-	3	170	4	0	2.4	0	1	-4,-6	-	-	4	ALTERNATIVE:2
ENSMUSG00000013622	Atraid	ENSMUST00000200942	ENSMUSP00000144431	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000013622	Atraid	ENSMUST00000200748	ENSMUSP00000144256	TRANSLATION	protein_coding	start/stop	-	5	183	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066735	Vkorc1l1	ENSMUST00000202298	ENSMUSP00000144266	TRANSLATION	nonsense_mediated_decay	start	-	3	82	0	0	0	27.6	2	-3,-1	-	-	-1	MINOR
ENSMUSG00000066735	Vkorc1l1	ENSMUST00000073945	ENSMUSP00000073601	TRANSLATION	protein_coding	-	CCDS80417.1	2	130	0	0	0.5	64.4	2	-4,-1	-	-	3.63	MINOR
ENSMUSG00000066735	Vkorc1l1	ENSMUST00000051758	ENSMUSP00000059139	TRANSLATION	protein_coding	-	CCDS19703.1	1	176	0	0	13.8	103.9	4	-3,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000066735	Vkorc1l1	ENSMUST00000202486	ENSMUSP00000144156	TRANSLATION	nonsense_mediated_decay	start	-	5	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066735	Vkorc1l1	ENSMUST00000201855	ENSMUSP00000144608	TRANSLATION	protein_coding	-	CCDS19704.1	1	127	0	0	1.5	0	2	-3,-1	-	-	0.156	MINOR
ENSMUSG00000083012	Fam220a	ENSMUST00000200267	ENSMUSP00000142548	TRANSLATION	protein_coding	-	CCDS51690.1	1	260	0	0	0.5	242.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000083012	Fam220a	ENSMUST00000196487	ENSMUSP00000143202	TRANSLATION	protein_coding	-	CCDS51690.1	1	260	0	0	0.5	242.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000083012	Fam220a	ENSMUST00000198994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000083012	Fam220a	ENSMUST00000198982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029474	Rnf34	ENSMUST00000198602	ENSMUSP00000143603	TRANSLATION	protein_coding	stop	-	2	105	6	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029474	Rnf34	ENSMUST00000031434	ENSMUSP00000031434	TRANSLATION	protein_coding	-	CCDS19656.1	1	376	16	2.12	1.7	43.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070576	Mn1	ENSMUST00000138784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070576	Mn1	ENSMUST00000094463	ENSMUSP00000092034	TRANSLATION	protein_coding	-	CCDS39214.1	2	1297	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079438	Gm11115	ENSMUST00000113255	ENSMUSP00000129532	TRANSLATION	protein_coding	start/stop	-	5	18	0	0	0	0	0	-2,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030032	Wdr54	ENSMUST00000153148	ENSMUSP00000116608	TRANSLATION	protein_coding	-	CCDS20275.1	1	334	0	1.06	8.8	0	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000030032	Wdr54	ENSMUST00000154625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030032	Wdr54	ENSMUST00000032108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030032	Wdr54	ENSMUST00000125894	ENSMUSP00000122873	TRANSLATION	protein_coding	stop	-	5	169	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030032	Wdr54	ENSMUST00000146969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030032	Wdr54	ENSMUST00000144723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001157	Gmcl1	ENSMUST00000135880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001157	Gmcl1	ENSMUST00000001185	ENSMUSP00000001185	TRANSLATION	protein_coding	-	CCDS20316.1	1	524	0	2.14	3.9	74.1	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000001157	Gmcl1	ENSMUST00000203741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001157	Gmcl1	ENSMUST00000113679	ENSMUSP00000109309	TRANSLATION	protein_coding	-	-	1	199	0	1.346	0	40.1	0	-4,-7	-	-	7.02	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000114822	ENSMUSP00000110470	TRANSLATION	protein_coding	-	-	1	196	8	0	0	50	0	-2,-4	-	-	0	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000114823	ENSMUSP00000110471	TRANSLATION	protein_coding	-	CCDS80528.1	1	417	19	0	5.1	219.9	0	-4,-5	-	-	11.924	ALTERNATIVE:1
ENSMUSG00000029922	Mkrn1	ENSMUST00000122996	ENSMUSP00000115231	TRANSLATION	protein_coding	start	-	1	344	17	0	0	77.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000146785	ENSMUSP00000123440	TRANSLATION	protein_coding	start/stop	-	3	180	8	0	0	47.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000150575	ENSMUSP00000121563	TRANSLATION	protein_coding	start	-	3	207	8	0	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000051671	ENSMUSP00000084244	TRANSLATION	protein_coding	-	-	1	329	18	0	0	100.8	0	-2,-4	-	-	4.668	MINOR
ENSMUSG00000029922	Mkrn1	ENSMUST00000122874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029922	Mkrn1	ENSMUST00000031985	ENSMUSP00000031985	TRANSLATION	protein_coding	-	CCDS20022.1	1	481	20	0	1.5	243.4	0	-2,-4	-	-	12.244	PRINCIPAL:3
ENSMUSG00000045466	Zfp956	ENSMUST00000140719	ENSMUSP00000114227	TRANSLATION	nonsense_mediated_decay	-	-	1	194	0	0	0	31.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045466	Zfp956	ENSMUST00000101445	ENSMUSP00000098989	TRANSLATION	protein_coding	-	CCDS20101.2	1	572	24	0.6	1.5	138.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045466	Zfp956	ENSMUST00000174790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029762	Akr1b8	ENSMUST00000133370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029762	Akr1b8	ENSMUST00000038406	ENSMUSP00000040244	TRANSLATION	protein_coding	-	CCDS19991.1	1	316	30	8.25	3.5	202.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000076540	Igkv4-80	ENSMUST00000103341	ENSMUSP00000100142	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	59.6	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000029913	Prdm5	ENSMUST00000173538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029913	Prdm5	ENSMUST00000205155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029913	Prdm5	ENSMUST00000205168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029913	Prdm5	ENSMUST00000031976	ENSMUSP00000031976	TRANSLATION	protein_coding	-	CCDS20208.1	1	599	58	11.07	5.1	275.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000029913	Prdm5	ENSMUST00000172638	ENSMUSP00000133423	TRANSLATION	protein_coding	-	-	5	501	42	8.27	3.6	188.6	0	-4,-7	-	-	2.45	MINOR
ENSMUSG00000029913	Prdm5	ENSMUST00000031973	ENSMUSP00000031973	TRANSLATION	protein_coding	-	CCDS85059.1	1	415	43	9.43	0.5	207.9	0	-4,-7	-	-	4.656	MINOR
ENSMUSG00000029913	Prdm5	ENSMUST00000081219	ENSMUSP00000079979	TRANSLATION	protein_coding	-	-	1	221	19	5.28	0	112.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038227	Hoxa9	ENSMUST00000174115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038227	Hoxa9	ENSMUST00000114425	ENSMUSP00000110068	TRANSLATION	protein_coding	-	-	2	105	0	0	0	121.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038227	Hoxa9	ENSMUST00000156540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038227	Hoxa9	ENSMUST00000154641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038227	Hoxa9	ENSMUST00000048680	ENSMUSP00000046939	TRANSLATION	protein_coding	-	CCDS20146.1	1	271	0	1	3.9	303.3	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000030089	Slc41a3	ENSMUST00000044019	ENSMUSP00000037473	TRANSLATION	protein_coding	-	CCDS20362.1	1	488	0	0	1.5	177	11	-4,-5	-	-	6.172	PRINCIPAL:4
ENSMUSG00000030089	Slc41a3	ENSMUST00000032177	ENSMUSP00000032177	TRANSLATION	protein_coding	-	CCDS20363.1	1	462	0	0	3.9	177	11	-4,-2	-	-	7	ALTERNATIVE:2
ENSMUSG00000053768	Chchd3	ENSMUST00000124436	ENSMUSP00000138484	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	53.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053768	Chchd3	ENSMUST00000143206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053768	Chchd3	ENSMUST00000066379	ENSMUSP00000070149	TRANSLATION	protein_coding	-	CCDS19986.1	1	227	0	0	7.5	166.6	0	-4,-5	-	-	8.454	PRINCIPAL:1
ENSMUSG00000053768	Chchd3	ENSMUST00000115091	ENSMUSP00000110743	TRANSLATION	protein_coding	-	-	1	175	0	0	0	166.6	0	-4,-5	-	-	5.454	MINOR
ENSMUSG00000053768	Chchd3	ENSMUST00000129654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053768	Chchd3	ENSMUST00000127666	ENSMUSP00000123220	TRANSLATION	protein_coding	stop	-	2	192	0	0	0	175.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053768	Chchd3	ENSMUST00000140446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053768	Chchd3	ENSMUST00000129069	ENSMUSP00000121589	TRANSLATION	protein_coding	start	-	3	89	0	0	0	50.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053768	Chchd3	ENSMUST00000133375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053768	Chchd3	ENSMUST00000125264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037997	Parp11	ENSMUST00000112191	ENSMUSP00000107810	TRANSLATION	protein_coding	-	CCDS85162.1	1	248	0	2.74	3.8	157.9	0	-4,-2	-	-	4.018	MINOR
ENSMUSG00000037997	Parp11	ENSMUST00000144115	ENSMUSP00000144598	TRANSLATION	nonsense_mediated_decay	-	-	2	43	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037997	Parp11	ENSMUST00000201717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037997	Parp11	ENSMUST00000128470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037997	Parp11	ENSMUST00000112193	ENSMUSP00000107812	TRANSLATION	protein_coding	-	-	1	176	0	3.99	0	58	0	-4,-5	-	-	3	MINOR
ENSMUSG00000037997	Parp11	ENSMUST00000039680	ENSMUSP00000036127	TRANSLATION	protein_coding	-	CCDS20565.1	1	331	0	5.49	2.7	215.9	0	-4,-5	-	-	12.607	PRINCIPAL:1
ENSMUSG00000037997	Parp11	ENSMUST00000134018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037997	Parp11	ENSMUST00000125364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037997	Parp11	ENSMUST00000136945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037997	Parp11	ENSMUST00000112195	ENSMUSP00000107814	TRANSLATION	protein_coding	-	-	3	176	0	3.99	0	58	0	-4,-5	-	-	3	MINOR
ENSMUSG00000030041	M1ap	ENSMUST00000113980	ENSMUSP00000109613	TRANSLATION	protein_coding	-	CCDS39525.1	1	529	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000030041	M1ap	ENSMUST00000204891	ENSMUSP00000144948	TRANSLATION	protein_coding	start	-	2	78	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030041	M1ap	ENSMUST00000144906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076472	Trbv15	ENSMUST00000103273	ENSMUSP00000100089	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	53.2	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000049093	Il23r	ENSMUST00000118364	ENSMUSP00000113342	TRANSLATION	protein_coding	-	CCDS39503.2	1	659	0	1.98	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030126	Tmcc1	ENSMUST00000173548	ENSMUSP00000145456	TRANSLATION	protein_coding	-	-	5	470	0	0	6.4	557.1	2	-4,-5	-	-	8.613	ALTERNATIVE:1
ENSMUSG00000030126	Tmcc1	ENSMUST00000173031	ENSMUSP00000134148	TRANSLATION	protein_coding	-	-	1	206	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000172909	ENSMUSP00000134407	TRANSLATION	nonsense_mediated_decay	start	-	3	72	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000204353	ENSMUSP00000144971	TRANSLATION	protein_coding	-	-	1	474	0	0	7.2	557.1	2	-4,-1	-	-	9	PRINCIPAL:3
ENSMUSG00000030126	Tmcc1	ENSMUST00000173117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030126	Tmcc1	ENSMUST00000204637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030126	Tmcc1	ENSMUST00000205160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030126	Tmcc1	ENSMUST00000088896	ENSMUSP00000086285	TRANSLATION	protein_coding	-	CCDS51881.1	1	649	0	0	2.8	557.1	2	-4,-5	-	-	6.87	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000204574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030126	Tmcc1	ENSMUST00000173140	ENSMUSP00000134455	TRANSLATION	protein_coding	-	-	5	329	0	0	4.1	393.1	2	-4,-5	-	-	1.5	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000173110	ENSMUSP00000133794	TRANSLATION	nonsense_mediated_decay	-	-	1	191	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000032222	ENSMUSP00000032222	TRANSLATION	protein_coding	start	-	1	690	0	0	0	557.1	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000030126	Tmcc1	ENSMUST00000172510	ENSMUSP00000133665	TRANSLATION	protein_coding	-	-	1	329	0	0	4.1	393.1	2	-4,-5	-	-	1.5	MINOR
ENSMUSG00000076477	Trbv21	ENSMUST00000103278	ENSMUSP00000100094	TRANSLATION	TR_V_gene	start/stop	-	-	96	0	1	0	54.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076477	Trbv21	ENSMUST00000195087	ENSMUSP00000141778	TRANSLATION	TR_V_gene	stop	-	-	97	0	1	0	54.1	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000076532	Igkv4-91	ENSMUST00000103333	ENSMUSP00000100134	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	57.9	0	1,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000071424	Grid2	ENSMUST00000162968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071424	Grid2	ENSMUST00000160408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071424	Grid2	ENSMUST00000210324	ENSMUSP00000147707	TRANSLATION	protein_coding	start	-	5	123	0	0.8	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000071424	Grid2	ENSMUST00000095852	ENSMUSP00000093536	TRANSLATION	protein_coding	-	CCDS20202.1	1	1007	12	13.83	10.8	429.4	4	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000071424	Grid2	ENSMUST00000159561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071424	Grid2	ENSMUST00000161105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071424	Grid2	ENSMUST00000159319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029920	Smarcad1	ENSMUST00000204111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029920	Smarcad1	ENSMUST00000205118	ENSMUSP00000145340	TRANSLATION	protein_coding	-	-	2	73	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000203411	ENSMUSP00000145262	TRANSLATION	nonsense_mediated_decay	start	-	3	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000205092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029920	Smarcad1	ENSMUST00000203756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029920	Smarcad1	ENSMUST00000204420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029920	Smarcad1	ENSMUST00000204165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029920	Smarcad1	ENSMUST00000204955	ENSMUSP00000145152	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000204114	ENSMUSP00000145228	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000204170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029920	Smarcad1	ENSMUST00000204620	ENSMUSP00000144767	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000204696	ENSMUSP00000144776	TRANSLATION	protein_coding	-	-	1	73	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029920	Smarcad1	ENSMUST00000203104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029920	Smarcad1	ENSMUST00000031984	ENSMUSP00000031984	TRANSLATION	protein_coding	-	CCDS20204.1	1	1021	5	10.61	1.5	266.3	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000029920	Smarcad1	ENSMUST00000204801	ENSMUSP00000145195	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095932	Vmn1r49	ENSMUST00000071865	ENSMUSP00000071762	TRANSLATION	protein_coding	-	CCDS20351.1	-	310	0	0	1.5	538.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095932	Vmn1r49	ENSMUST00000226368	ENSMUSP00000154456	TRANSLATION	protein_coding	-	CCDS20351.1	-	310	0	0	1.5	538.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095932	Vmn1r49	ENSMUST00000203791	ENSMUSP00000145107	TRANSLATION	protein_coding	-	CCDS20351.1	2	310	0	0	1.5	538.8	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094200	Olfr237	ENSMUST00000095953	ENSMUSP00000093647	TRANSLATION	protein_coding	-	CCDS20087.1	-	310	0	0.42	6.3	204.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094200	Olfr237	ENSMUST00000216411	ENSMUSP00000149245	TRANSLATION	protein_coding	-	CCDS20087.1	5	310	0	0.42	6.3	204.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094200	Olfr237	ENSMUST00000215911	ENSMUSP00000149261	TRANSLATION	protein_coding	-	CCDS20087.1	5	310	0	0.42	6.3	204.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030316	Tamm41	ENSMUST00000032461	ENSMUSP00000032461	TRANSLATION	protein_coding	-	CCDS20437.1	1	337	0	0	9.5	369.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030316	Tamm41	ENSMUST00000154621	ENSMUSP00000116995	TRANSLATION	nonsense_mediated_decay	-	-	3	149	0	0	0	114.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030316	Tamm41	ENSMUST00000172495	ENSMUSP00000134105	TRANSLATION	nonsense_mediated_decay	start	-	3	124	0	0	0	143.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030316	Tamm41	ENSMUST00000144445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030316	Tamm41	ENSMUST00000144969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030316	Tamm41	ENSMUST00000137654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030316	Tamm41	ENSMUST00000112975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030316	Tamm41	ENSMUST00000174848	ENSMUSP00000133340	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	241.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016487	Ppfibp1	ENSMUST00000149203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016487	Ppfibp1	ENSMUST00000016631	ENSMUSP00000016631	TRANSLATION	protein_coding	-	CCDS39715.1	1	969	0	8.35	1.5	176.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000016487	Ppfibp1	ENSMUST00000123902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016487	Ppfibp1	ENSMUST00000133825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016487	Ppfibp1	ENSMUST00000203730	ENSMUSP00000145088	TRANSLATION	protein_coding	stop	-	5	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016487	Ppfibp1	ENSMUST00000204028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016487	Ppfibp1	ENSMUST00000155415	ENSMUSP00000121270	TRANSLATION	protein_coding	start/stop	-	3	254	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016487	Ppfibp1	ENSMUST00000111623	ENSMUSP00000107250	TRANSLATION	protein_coding	-	CCDS51958.1	1	980	0	8.35	1.5	176.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000016487	Ppfibp1	ENSMUST00000126774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016487	Ppfibp1	ENSMUST00000154221	ENSMUSP00000122515	TRANSLATION	protein_coding	start/stop	-	5	242	0	2.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016487	Ppfibp1	ENSMUST00000136837	ENSMUSP00000114340	TRANSLATION	protein_coding	start/stop	-	3	193	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016487	Ppfibp1	ENSMUST00000204660	ENSMUSP00000144887	TRANSLATION	protein_coding	stop	-	3	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000204976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030225	Dera	ENSMUST00000204779	ENSMUSP00000144841	TRANSLATION	protein_coding	start	-	5	152	9	3.78	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000087675	ENSMUSP00000084959	TRANSLATION	protein_coding	-	CCDS20666.1	1	318	9	5.9384	12.1	95.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000030225	Dera	ENSMUST00000203340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030225	Dera	ENSMUST00000204544	-	NO_TRANSLATION	TEC
ENSMUSG00000030225	Dera	ENSMUST00000204100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030225	Dera	ENSMUST00000203754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030225	Dera	ENSMUST00000203507	ENSMUSP00000144819	TRANSLATION	protein_coding	start	-	5	74	7	1.912	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000203046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030225	Dera	ENSMUST00000204723	ENSMUSP00000145030	TRANSLATION	protein_coding	start	-	3	34	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000204356	ENSMUSP00000145106	TRANSLATION	protein_coding	start	-	5	96	3	1.4384	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000203136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030225	Dera	ENSMUST00000203693	ENSMUSP00000144935	TRANSLATION	protein_coding	-	-	1	290	3	4.3584	0	86.4	0	-4,-7	-	-	10.272	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000203216	ENSMUSP00000145264	TRANSLATION	protein_coding	-	-	5	116	8	2.9384	0	28.4	0	-4,-5	-	-	7.122	MINOR
ENSMUSG00000030225	Dera	ENSMUST00000205060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007655	Cav1	ENSMUST00000115454	ENSMUSP00000111114	TRANSLATION	protein_coding	-	CCDS57410.1	2	147	0	0	13.3	203.1	2	-4,-5	-	-	10	ALTERNATIVE:1
ENSMUSG00000007655	Cav1	ENSMUST00000133065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007655	Cav1	ENSMUST00000007799	ENSMUSP00000007799	TRANSLATION	protein_coding	-	CCDS19924.1	1	178	0	0	12.8	203.1	2	-4,-5	-	-	9.836	PRINCIPAL:3
ENSMUSG00000007655	Cav1	ENSMUST00000130505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007655	Cav1	ENSMUST00000177234	ENSMUSP00000135875	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007655	Cav1	ENSMUST00000115455	ENSMUSP00000111115	TRANSLATION	protein_coding	stop	-	3	115	0	0	0	130.2	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000007655	Cav1	ENSMUST00000115453	ENSMUSP00000111113	TRANSLATION	protein_coding	-	CCDS57410.1	1	147	0	0	13.3	203.1	2	-4,-5	-	-	10	ALTERNATIVE:1
ENSMUSG00000007655	Cav1	ENSMUST00000150901	ENSMUSP00000135374	TRANSLATION	protein_coding	-	-	2	93	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000007655	Cav1	ENSMUST00000115456	ENSMUSP00000111116	TRANSLATION	protein_coding	-	CCDS19924.1	2	178	0	0	12.8	203.1	2	-4,-5	-	-	9.836	PRINCIPAL:3
ENSMUSG00000007655	Cav1	ENSMUST00000123439	ENSMUSP00000120252	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000115181	Vmn1r10	ENSMUST00000176073	ENSMUSP00000134901	TRANSLATION	protein_coding	-	CCDS39495.1	-	311	0	0	0.5	175.9	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115181	Vmn1r10	ENSMUST00000228270	ENSMUSP00000154213	TRANSLATION	protein_coding	-	CCDS39495.1	-	311	0	0	0.5	175.9	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000184	Ccnd2	ENSMUST00000201066	ENSMUSP00000144095	TRANSLATION	protein_coding	-	-	2	156	0	2.48	0	114.5	0	-4,-5	-	-	2.13	MINOR
ENSMUSG00000000184	Ccnd2	ENSMUST00000000188	ENSMUSP00000000188	TRANSLATION	protein_coding	-	CCDS20564.1	1	289	0	4.8	7.5	201.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000184	Ccnd2	ENSMUST00000202363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000184	Ccnd2	ENSMUST00000201564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000184	Ccnd2	ENSMUST00000201902	ENSMUSP00000144006	TRANSLATION	protein_coding	stop	-	5	189	0	3	0	127.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000184	Ccnd2	ENSMUST00000201637	ENSMUSP00000144245	TRANSLATION	protein_coding	-	-	1	156	0	2.48	0	114.5	0	-4,-5	-	-	2.13	MINOR
ENSMUSG00000000184	Ccnd2	ENSMUST00000201985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000184	Ccnd2	ENSMUST00000201857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030271	Ogg1	ENSMUST00000129871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030271	Ogg1	ENSMUST00000032406	ENSMUSP00000032406	TRANSLATION	protein_coding	-	CCDS20414.1	1	345	13	7.08	1.5	189.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000030271	Ogg1	ENSMUST00000154350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030271	Ogg1	ENSMUST00000136263	ENSMUSP00000144792	TRANSLATION	nonsense_mediated_decay	-	-	1	138	2	2	0	94.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030271	Ogg1	ENSMUST00000147945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030271	Ogg1	ENSMUST00000204834	ENSMUSP00000144905	TRANSLATION	nonsense_mediated_decay	-	-	5	137	2	2	0	96	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030271	Ogg1	ENSMUST00000203721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030098	Grip2	ENSMUST00000161566	ENSMUSP00000123941	TRANSLATION	nonsense_mediated_decay	-	-	5	174	0	2.78	0	51.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030098	Grip2	ENSMUST00000162300	ENSMUSP00000124709	TRANSLATION	protein_coding	-	CCDS51852.1	5	1042	0	15.925	3.9	257.4	0	-4,-2	-	-	13	PRINCIPAL:2
ENSMUSG00000030098	Grip2	ENSMUST00000162293	ENSMUSP00000124717	TRANSLATION	nonsense_mediated_decay	-	-	5	821	0	13.26	0	257.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030098	Grip2	ENSMUST00000159684	ENSMUSP00000125047	TRANSLATION	protein_coding	-	-	5	1001	0	15.925	2.2	257.4	0	-4,-2	-	-	12.414	ALTERNATIVE:2
ENSMUSG00000030098	Grip2	ENSMUST00000161545	ENSMUSP00000125538	TRANSLATION	nonsense_mediated_decay	start	-	3	119	0	1.465	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030098	Grip2	ENSMUST00000205964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029828	4921507P07Rik	ENSMUST00000031852	ENSMUSP00000031852	TRANSLATION	protein_coding	-	CCDS20132.1	1	588	0	0	3.9	484.1	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000056926	Tas2r113	ENSMUST00000079035	ENSMUSP00000078044	TRANSLATION	protein_coding	-	CCDS20627.1	-	309	0	0	0.5	254.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029534	St7	ENSMUST00000144488	ENSMUSP00000115215	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	0	0	97.7	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000029534	St7	ENSMUST00000144743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029534	St7	ENSMUST00000154059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029534	St7	ENSMUST00000077080	ENSMUSP00000076334	TRANSLATION	protein_coding	-	CCDS71730.1	1	531	0	0	2.7	1004.6	6	-4,-6	-	-	2.31	MINOR
ENSMUSG00000029534	St7	ENSMUST00000000674	ENSMUSP00000000674	TRANSLATION	protein_coding	-	CCDS71731.1	1	508	0	0	2.8	1020.1	6	-4,-6	-	-	3.27	MINOR
ENSMUSG00000029534	St7	ENSMUST00000115418	ENSMUSP00000111078	TRANSLATION	protein_coding	-	-	5	503	0	0	0	873.7	4	-3,-6	-	-	0	MINOR
ENSMUSG00000029534	St7	ENSMUST00000130084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029534	St7	ENSMUST00000127322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029534	St7	ENSMUST00000138726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029534	St7	ENSMUST00000150281	ENSMUSP00000116304	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0	0	38.5	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000029534	St7	ENSMUST00000115420	ENSMUSP00000111080	TRANSLATION	protein_coding	-	-	5	523	0	0	0	874.3	7	-3,-6	-	-	0	MINOR
ENSMUSG00000029534	St7	ENSMUST00000132175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029534	St7	ENSMUST00000154497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029534	St7	ENSMUST00000115419	ENSMUSP00000111079	TRANSLATION	protein_coding	-	CCDS80490.1	1	572	0	0	0.5	1030.3	7	-3,-6	-	-	3.342	MINOR
ENSMUSG00000029534	St7	ENSMUST00000129105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029534	St7	ENSMUST00000081635	ENSMUSP00000080341	TRANSLATION	protein_coding	-	CCDS71728.1	1	577	0	0	6.3	1058.1	7	-3,-6	-	-	6.6	MINOR
ENSMUSG00000029534	St7	ENSMUST00000053148	ENSMUSP00000057326	TRANSLATION	protein_coding	-	CCDS19927.1	1	534	0	0	3.9	1003.9	6	-4,-7	-	-	2.628	MINOR
ENSMUSG00000029534	St7	ENSMUST00000115417	ENSMUSP00000111077	TRANSLATION	protein_coding	-	CCDS39431.1	1	511	0	0	10.4	1019.6	6	-4,-7	-	-	5.52	MINOR
ENSMUSG00000029534	St7	ENSMUST00000052113	ENSMUSP00000062886	TRANSLATION	protein_coding	-	CCDS71729.1	1	554	0	0	11	1074.6	7	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000029534	St7	ENSMUST00000125673	ENSMUSP00000122970	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	35.6	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000029534	St7	ENSMUST00000140358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030359	Pzp	ENSMUST00000112132	ENSMUSP00000107760	TRANSLATION	protein_coding	-	CCDS39650.1	1	1495	2	29.29	0.5	719.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030359	Pzp	ENSMUST00000203753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030359	Pzp	ENSMUST00000143664	ENSMUSP00000120114	TRANSLATION	protein_coding	stop	-	5	233	0	3.8	0	59.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030359	Pzp	ENSMUST00000204291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032758	Kap	ENSMUST00000203168	ENSMUSP00000145449	TRANSLATION	protein_coding	-	-	3	104	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000032758	Kap	ENSMUST00000048032	ENSMUSP00000041060	TRANSLATION	protein_coding	-	CCDS20635.1	1	121	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000029869	Ephb6	ENSMUST00000167497	ENSMUSP00000132773	TRANSLATION	protein_coding	start	-	2	46	0	0	0	34.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029869	Ephb6	ENSMUST00000114732	ENSMUSP00000110380	TRANSLATION	protein_coding	-	CCDS20051.1	1	1014	0	11.91	1.5	649.4	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000029869	Ephb6	ENSMUST00000167082	ENSMUSP00000133131	TRANSLATION	nonsense_mediated_decay	start	-	5	130	0	1.019	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029869	Ephb6	ENSMUST00000170624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030245	Golt1b	ENSMUST00000146508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030245	Golt1b	ENSMUST00000032372	ENSMUSP00000032372	TRANSLATION	protein_coding	-	CCDS20682.1	1	138	0	0	21.5	64.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000061436	Hipk2	ENSMUST00000162359	ENSMUSP00000125150	TRANSLATION	protein_coding	-	CCDS80527.1	1	1169	18	2.755	5.1	173.3	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000061436	Hipk2	ENSMUST00000160962	ENSMUSP00000125572	TRANSLATION	protein_coding	-	CCDS51752.1	1	1161	18	2.755	1.8	173.3	0	-4,-7	-	-	18.39	MINOR
ENSMUSG00000061436	Hipk2	ENSMUST00000159307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061436	Hipk2	ENSMUST00000159894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061436	Hipk2	ENSMUST00000114855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061436	Hipk2	ENSMUST00000160360	ENSMUSP00000125500	TRANSLATION	protein_coding	-	CCDS80526.1	1	1168	18	2.755	1.5	173.3	0	-4,-7	-	-	18.244	MINOR
ENSMUSG00000061436	Hipk2	ENSMUST00000161779	ENSMUSP00000124133	TRANSLATION	protein_coding	-	CCDS20017.2	1	1196	18	2.755	5.1	173.3	0	-4,-7	-	-	20	PRINCIPAL:3
ENSMUSG00000068327	Tlx2	ENSMUST00000089641	ENSMUSP00000087069	TRANSLATION	protein_coding	-	CCDS20269.1	1	284	0	1.6	7.5	69.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068327	Tlx2	ENSMUST00000174674	ENSMUSP00000133420	TRANSLATION	protein_coding	-	-	1	213	0	1	0	69.3	0	-4,-5	-	-	9.726	MINOR
ENSMUSG00000045441	Gprin3	ENSMUST00000051065	ENSMUSP00000051805	TRANSLATION	protein_coding	-	CCDS20199.1	1	763	0	0	0.5	158.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043119	Olfr448	ENSMUST00000214529	ENSMUSP00000148884	TRANSLATION	protein_coding	-	CCDS20082.1	5	310	0	0.42	6.3	206.5	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000043119	Olfr448	ENSMUST00000213952	ENSMUSP00000150419	TRANSLATION	protein_coding	-	CCDS20082.1	5	310	0	0.42	6.3	206.5	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000043119	Olfr448	ENSMUST00000058668	ENSMUSP00000059195	TRANSLATION	protein_coding	-	CCDS20082.1	-	310	0	0.42	6.3	206.5	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000005362	Crbn	ENSMUST00000113239	ENSMUSP00000108865	TRANSLATION	protein_coding	-	CCDS39583.1	1	445	4	10.1	5.1	133.3	0	-4,-5	-	-	17.893	MINOR
ENSMUSG00000005362	Crbn	ENSMUST00000147087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005362	Crbn	ENSMUST00000151484	ENSMUSP00000144723	TRANSLATION	protein_coding	stop	-	3	253	0	5.25	0	57.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005362	Crbn	ENSMUST00000204230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005362	Crbn	ENSMUST00000013882	ENSMUSP00000013882	TRANSLATION	protein_coding	-	CCDS39584.1	1	444	4	10.1	7.5	133.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030219	Erp27	ENSMUST00000162243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030219	Erp27	ENSMUST00000032343	ENSMUSP00000032343	TRANSLATION	protein_coding	-	CCDS20660.1	1	272	0	5	5.1	140.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000030219	Erp27	ENSMUST00000162755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068263	Efcc1	ENSMUST00000032132	ENSMUSP00000032132	TRANSLATION	protein_coding	-	-	5	559	0	0	0.5	963.4	0	-4,-2	-	-	5.754	ALTERNATIVE:2
ENSMUSG00000068263	Efcc1	ENSMUST00000160743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068263	Efcc1	ENSMUST00000159681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068263	Efcc1	ENSMUST00000159570	ENSMUSP00000138649	TRANSLATION	protein_coding	-	CCDS51840.1	5	558	0	0	0.5	967.5	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000068263	Efcc1	ENSMUST00000159956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056901	Tas2r102	ENSMUST00000069268	ENSMUSP00000068332	TRANSLATION	protein_coding	-	CCDS20621.1	-	347	0	0	0.5	327	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044927	H1f10	ENSMUST00000056403	ENSMUSP00000060761	TRANSLATION	protein_coding	-	CCDS20331.1	-	188	0	0.8	1.5	60	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030019	Fbxl14	ENSMUST00000032094	ENSMUSP00000032094	TRANSLATION	protein_coding	-	CCDS20475.1	-	400	0	0.28	15.1	99.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030340	Scnn1a	ENSMUST00000176110	ENSMUSP00000134940	TRANSLATION	protein_coding	-	-	5	674	0	3.209	0	356.2	4	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030340	Scnn1a	ENSMUST00000175966	ENSMUSP00000135551	TRANSLATION	nonsense_mediated_decay	-	-	5	275	0	0.72	0	93.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000030340	Scnn1a	ENSMUST00000176655	ENSMUSP00000135798	TRANSLATION	protein_coding	-	-	5	593	0	3.209	0	332.4	4	1,-3	-	-	10.572	MINOR
ENSMUSG00000030340	Scnn1a	ENSMUST00000176442	ENSMUSP00000135336	TRANSLATION	protein_coding	stop	-	5	591	0	3.209	0	332.4	4	1,-3	-	-	-1	MINOR
ENSMUSG00000030340	Scnn1a	ENSMUST00000177329	ENSMUSP00000134929	TRANSLATION	protein_coding	-	-	5	674	0	3.209	0	356.2	4	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030340	Scnn1a	ENSMUST00000081440	ENSMUSP00000080164	TRANSLATION	protein_coding	-	CCDS39641.2	1	700	0	3.209	1.5	356.2	4	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030340	Scnn1a	ENSMUST00000176365	ENSMUSP00000135467	TRANSLATION	protein_coding	stop	-	5	143	0	0.84	0	90.4	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000053012	Krcc1	ENSMUST00000080949	ENSMUSP00000079748	TRANSLATION	protein_coding	-	CCDS20228.1	1	256	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000053012	Krcc1	ENSMUST00000205123	ENSMUSP00000145024	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053012	Krcc1	ENSMUST00000204436	ENSMUSP00000145416	TRANSLATION	protein_coding	-	CCDS20228.1	1	256	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000053012	Krcc1	ENSMUST00000168700	ENSMUSP00000130252	TRANSLATION	protein_coding	-	CCDS20228.1	1	256	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000076534	Igkv12-89	ENSMUST00000199143	ENSMUSP00000143728	TRANSLATION	IG_V_gene	stop	-	-	112	2	1	0	54.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076534	Igkv12-89	ENSMUST00000103335	ENSMUSP00000100136	TRANSLATION	IG_V_gene	stop	-	-	111	2	1	0	54.7	0	1,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000056698	Elmod3	ENSMUST00000141833	ENSMUSP00000145544	TRANSLATION	protein_coding	-	-	1	328	0	0	0	107.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000056698	Elmod3	ENSMUST00000148108	ENSMUSP00000145907	TRANSLATION	protein_coding	stop	-	5	213	0	0	0	70.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056698	Elmod3	ENSMUST00000140825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056698	Elmod3	ENSMUST00000114069	ENSMUSP00000109703	TRANSLATION	protein_coding	-	CCDS20243.1	1	381	0	0	1.5	107.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000056698	Elmod3	ENSMUST00000070990	ENSMUSP00000067768	TRANSLATION	protein_coding	-	CCDS20243.1	1	381	0	0	1.5	107.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000056698	Elmod3	ENSMUST00000152705	ENSMUSP00000116448	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039578	Ccser1	ENSMUST00000232648	ENSMUSP00000156135	TRANSLATION	protein_coding	start	-	-	58	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039578	Ccser1	ENSMUST00000204337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039578	Ccser1	ENSMUST00000134710	ENSMUSP00000122633	TRANSLATION	protein_coding	start	-	2	168	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039578	Ccser1	ENSMUST00000126214	ENSMUSP00000122894	TRANSLATION	protein_coding	-	CCDS51800.1	5	895	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000039578	Ccser1	ENSMUST00000203850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039578	Ccser1	ENSMUST00000045522	ENSMUSP00000040251	TRANSLATION	protein_coding	-	CCDS51800.1	1	895	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000039578	Ccser1	ENSMUST00000203112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039578	Ccser1	ENSMUST00000145554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039578	Ccser1	ENSMUST00000133478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039578	Ccser1	ENSMUST00000067307	ENSMUSP00000067639	TRANSLATION	protein_coding	start	-	1	231	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039578	Ccser1	ENSMUST00000147576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039578	Ccser1	ENSMUST00000131989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029814	Igf2bp3	ENSMUST00000203680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029814	Igf2bp3	ENSMUST00000031838	ENSMUSP00000031838	TRANSLATION	protein_coding	-	CCDS39485.1	1	579	0	9.41	7.5	230.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029814	Igf2bp3	ENSMUST00000203544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029814	Igf2bp3	ENSMUST00000203863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029814	Igf2bp3	ENSMUST00000205057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030088	Aldh1l1	ENSMUST00000204796	ENSMUSP00000145380	TRANSLATION	nonsense_mediated_decay	-	-	5	359	2	8.58	1.2	244.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030088	Aldh1l1	ENSMUST00000032175	ENSMUSP00000032175	TRANSLATION	protein_coding	-	CCDS20361.1	1	902	32	20.43	6.3	822.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030088	Aldh1l1	ENSMUST00000127199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030088	Aldh1l1	ENSMUST00000203111	ENSMUSP00000145233	TRANSLATION	protein_coding	stop	-	5	135	2	2.5	0	143.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030088	Aldh1l1	ENSMUST00000152436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030088	Aldh1l1	ENSMUST00000137669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030088	Aldh1l1	ENSMUST00000130418	ENSMUSP00000114304	TRANSLATION	protein_coding	-	CCDS20361.1	1	902	32	20.43	6.3	822.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030114	Klrg1	ENSMUST00000032207	ENSMUSP00000032207	TRANSLATION	protein_coding	-	CCDS20492.1	1	188	0	3.06	1.5	44	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095630	Igkv6-23	ENSMUST00000103386	ENSMUSP00000100187	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.5	0	55.6	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000062751	Prss1	ENSMUST00000031910	ENSMUSP00000031910	TRANSLATION	protein_coding	-	CCDS20049.1	1	246	22	4.5	13.1	272.7	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000029571	Tmem106b	ENSMUST00000142798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029571	Tmem106b	ENSMUST00000142211	ENSMUSP00000122392	TRANSLATION	protein_coding	stop	-	2	70	2	0	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029571	Tmem106b	ENSMUST00000124234	ENSMUSP00000123208	TRANSLATION	protein_coding	stop	-	5	93	2	0	0	102.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029571	Tmem106b	ENSMUST00000136742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029571	Tmem106b	ENSMUST00000122916	ENSMUSP00000122107	TRANSLATION	protein_coding	stop	-	5	185	2	0	0	264.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029571	Tmem106b	ENSMUST00000031556	ENSMUSP00000031556	TRANSLATION	protein_coding	-	CCDS19914.1	1	275	2	0	11.5	393.8	1	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000094262	Igkv4-62	ENSMUST00000177795	ENSMUSP00000137031	TRANSLATION	protein_coding	start/stop	-	-	96	2	1	0	62.2	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094262	Igkv4-62	ENSMUST00000198345	ENSMUSP00000142538	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	61.1	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000059187	Tafa1	ENSMUST00000125951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059187	Tafa1	ENSMUST00000122120	ENSMUSP00000113152	TRANSLATION	protein_coding	-	CCDS39574.1	1	133	0	0	12.8	158	0	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000059187	Tafa1	ENSMUST00000129844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059187	Tafa1	ENSMUST00000075080	ENSMUSP00000074589	TRANSLATION	protein_coding	-	CCDS39574.1	1	133	0	0	12.8	158	0	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000037826	Ppm1k	ENSMUST00000203713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037826	Ppm1k	ENSMUST00000204607	ENSMUSP00000145312	TRANSLATION	protein_coding	start	-	5	101	3	2.33	0	81.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037826	Ppm1k	ENSMUST00000042766	ENSMUSP00000041395	TRANSLATION	protein_coding	-	CCDS20183.1	1	372	11	6	8.8	192.8	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000003500	Impdh1	ENSMUST00000160878	ENSMUSP00000124269	TRANSLATION	protein_coding	-	-	5	489	48	13.33	1.2	469.4	0	-4,-5	-	-	13.766	MINOR
ENSMUSG00000003500	Impdh1	ENSMUST00000160613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003500	Impdh1	ENSMUST00000160749	ENSMUSP00000125488	TRANSLATION	protein_coding	stop	-	5	84	2	2.5	0	70.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003500	Impdh1	ENSMUST00000162215	ENSMUSP00000125235	TRANSLATION	protein_coding	stop	-	5	231	20	6.25	0	157	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003500	Impdh1	ENSMUST00000078155	ENSMUSP00000077289	TRANSLATION	protein_coding	-	CCDS39449.1	1	514	48	14.08	13	516.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000003500	Impdh1	ENSMUST00000162739	ENSMUSP00000125077	TRANSLATION	protein_coding	-	-	5	538	48	13.28	0	505.5	0	-3,-4	-	-	15.762	MINOR
ENSMUSG00000003500	Impdh1	ENSMUST00000162099	ENSMUSP00000124541	TRANSLATION	protein_coding	-	CCDS39449.1	1	514	48	14.08	13	516.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000003500	Impdh1	ENSMUST00000159124	ENSMUSP00000124931	TRANSLATION	protein_coding	-	CCDS39449.1	1	514	48	14.08	13	516.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000003500	Impdh1	ENSMUST00000162242	ENSMUSP00000123981	TRANSLATION	protein_coding	start	-	2	187	12	4.028	0	155.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003500	Impdh1	ENSMUST00000161654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003477	Inmt	ENSMUST00000152720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003477	Inmt	ENSMUST00000003569	ENSMUSP00000003569	TRANSLATION	protein_coding	-	CCDS20163.1	1	264	22	3	3.9	366.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000040187	Arntl2	ENSMUST00000204578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040187	Arntl2	ENSMUST00000080530	ENSMUSP00000079373	TRANSLATION	protein_coding	-	CCDS20702.1	1	579	0	8.805	0.5	166.1	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000040187	Arntl2	ENSMUST00000129788	ENSMUSP00000121170	TRANSLATION	nonsense_mediated_decay	-	-	2	199	0	3.75	0	87.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040187	Arntl2	ENSMUST00000111636	ENSMUSP00000107263	TRANSLATION	protein_coding	-	CCDS80640.1	1	570	0	8.805	0.5	166.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000040187	Arntl2	ENSMUST00000111639	ENSMUSP00000107266	TRANSLATION	protein_coding	-	CCDS20702.1	5	579	0	8.805	0.5	166.1	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000040187	Arntl2	ENSMUST00000123444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040187	Arntl2	ENSMUST00000111638	ENSMUSP00000107265	TRANSLATION	protein_coding	-	CCDS80641.1	1	569	0	8.475	0.5	145.6	0	-4,-2	-	-	10.11	MINOR
ENSMUSG00000040187	Arntl2	ENSMUST00000203818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040187	Arntl2	ENSMUST00000136594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004654	Ghrhr	ENSMUST00000063578	ENSMUSP00000068120	TRANSLATION	protein_coding	-	CCDS20165.1	1	423	0	8.2	3.9	339.8	9	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000004654	Ghrhr	ENSMUST00000204988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004654	Ghrhr	ENSMUST00000203241	ENSMUSP00000145224	TRANSLATION	protein_coding	-	-	1	386	0	7	0	281	7	2,-3	-	-	6.072	MINOR
ENSMUSG00000030330	Ing4	ENSMUST00000156091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030330	Ing4	ENSMUST00000152574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030330	Ing4	ENSMUST00000151125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030330	Ing4	ENSMUST00000133695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030330	Ing4	ENSMUST00000112417	ENSMUSP00000108036	TRANSLATION	nonsense_mediated_decay	-	-	1	168	0	3.05	0	113.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030330	Ing4	ENSMUST00000140131	ENSMUSP00000121519	TRANSLATION	protein_coding	-	-	1	249	8	5.96	13.6	113.8	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000030330	Ing4	ENSMUST00000032480	ENSMUSP00000032480	TRANSLATION	protein_coding	-	CCDS39632.1	1	248	8	5.96	13.6	113.8	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000030330	Ing4	ENSMUST00000146229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030330	Ing4	ENSMUST00000128277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101298	Gm28308	ENSMUST00000128102	ENSMUSP00000140776	TRANSLATION	protein_coding,RT	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079298	Klrb1b	ENSMUST00000172887	ENSMUSP00000134637	TRANSLATION	protein_coding	-	-	1	145	0	1.58	0.5	0	1	-4,-6	-	-	1.338	MINOR
ENSMUSG00000079298	Klrb1b	ENSMUST00000032472	ENSMUSP00000032472	TRANSLATION	protein_coding	-	CCDS39655.1	1	223	0	3.91	1.5	76.6	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079298	Klrb1b	ENSMUST00000174544	ENSMUSP00000134022	TRANSLATION	protein_coding	stop	-	3	97	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079298	Klrb1b	ENSMUST00000205130	ENSMUSP00000144964	TRANSLATION	protein_coding	-	-	1	199	0	3.16	0	76.6	1	-4,-6	-	-	10.5	MINOR
ENSMUSG00000095831	Olfr453	ENSMUST00000213997	ENSMUSP00000150467	TRANSLATION	protein_coding	-	CCDS20077.1	5	317	0	0.36	8.8	181.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095831	Olfr453	ENSMUST00000053647	ENSMUSP00000052043	TRANSLATION	protein_coding	-	CCDS20077.1	-	317	0	0.36	8.8	181.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096490	Igkv10-94	ENSMUST00000103330	ENSMUSP00000100131	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	63.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000007458	M6pr	ENSMUST00000123093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007458	M6pr	ENSMUST00000007602	ENSMUSP00000007602	TRANSLATION	protein_coding	-	CCDS20493.1	1	278	9	4	8.8	598.9	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000007458	M6pr	ENSMUST00000112610	ENSMUSP00000108229	TRANSLATION	protein_coding	-	CCDS20493.1	5	278	9	4	8.8	598.9	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000029823	Luc7l2	ENSMUST00000162530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029823	Luc7l2	ENSMUST00000163012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029823	Luc7l2	ENSMUST00000159936	ENSMUSP00000123970	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029823	Luc7l2	ENSMUST00000160922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029823	Luc7l2	ENSMUST00000163047	ENSMUSP00000125394	TRANSLATION	protein_coding	-	CCDS80525.1	1	272	6	0	0.5	198	0	-4,-5	-	-	6.048	MINOR
ENSMUSG00000029823	Luc7l2	ENSMUST00000161227	ENSMUSP00000125111	TRANSLATION	protein_coding	-	CCDS80524.1	1	339	6	0	6.3	198	0	-4,-5	-	-	8.493	MINOR
ENSMUSG00000029823	Luc7l2	ENSMUST00000161538	ENSMUSP00000124010	TRANSLATION	protein_coding	-	CCDS51751.1	1	325	8	0	0.5	272.2	0	-4,-7	-	-	12	MINOR
ENSMUSG00000029823	Luc7l2	ENSMUST00000162718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029823	Luc7l2	ENSMUST00000162386	ENSMUSP00000125573	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029823	Luc7l2	ENSMUST00000160582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029823	Luc7l2	ENSMUST00000160430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029823	Luc7l2	ENSMUST00000057692	ENSMUSP00000055254	TRANSLATION	protein_coding	-	CCDS20015.1	1	392	8	0	7.5	272.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029823	Luc7l2	ENSMUST00000160511	ENSMUSP00000125527	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000076607	Igkj4	ENSMUST00000103408	ENSMUSP00000143297	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030322	Mbd4	ENSMUST00000133830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030322	Mbd4	ENSMUST00000032469	ENSMUSP00000032469	TRANSLATION	protein_coding	-	CCDS39603.1	1	554	3	4.95	0.5	94.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030322	Mbd4	ENSMUST00000147282	ENSMUSP00000125619	TRANSLATION	nonsense_mediated_decay	-	-	2	365	0	1.2	0	70.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030322	Mbd4	ENSMUST00000203643	ENSMUSP00000144930	TRANSLATION	protein_coding	start	-	3	175	3	3.75	0	24.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030322	Mbd4	ENSMUST00000122816	ENSMUSP00000145433	TRANSLATION	protein_coding	-	-	1	386	0	1.2	0	70.4	0	-4,-5	-	-	4.458	MINOR
ENSMUSG00000059375	Vmn1r33	ENSMUST00000227418	ENSMUSP00000153840	TRANSLATION	protein_coding	-	CCDS20212.1	-	305	0	0	1.5	172.9	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059375	Vmn1r33	ENSMUST00000079678	ENSMUSP00000078619	TRANSLATION	protein_coding	-	CCDS20212.1	-	305	0	0	1.5	172.9	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091008	Gm17472	ENSMUST00000167638	ENSMUSP00000131191	TRANSLATION	IG_LV_gene	stop	-	5	117	2	1.5	0	38.9	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000076543	Igkv4-74	ENSMUST00000103344	ENSMUSP00000100145	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	62.9	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000023505	Cdca3	ENSMUST00000150120	ENSMUSP00000116849	TRANSLATION	protein_coding	stop	-	3	213	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023505	Cdca3	ENSMUST00000134637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023505	Cdca3	ENSMUST00000131847	ENSMUSP00000120410	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023505	Cdca3	ENSMUST00000136692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023505	Cdca3	ENSMUST00000151674	ENSMUSP00000120626	TRANSLATION	protein_coding	stop	-	3	180	0	0	2.4	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023505	Cdca3	ENSMUST00000024270	ENSMUSP00000024270	TRANSLATION	protein_coding	-	CCDS39629.1	1	266	0	0	2.9	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000035125	Gcfc2	ENSMUST00000132301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035125	Gcfc2	ENSMUST00000043195	ENSMUSP00000035644	TRANSLATION	protein_coding	-	CCDS20260.1	1	769	0	0	0.5	105.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035125	Gcfc2	ENSMUST00000152996	ENSMUSP00000138136	TRANSLATION	nonsense_mediated_decay	-	-	1	263	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035125	Gcfc2	ENSMUST00000129678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035125	Gcfc2	ENSMUST00000204691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035125	Gcfc2	ENSMUST00000147673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035125	Gcfc2	ENSMUST00000127949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035125	Gcfc2	ENSMUST00000203959	ENSMUSP00000144868	TRANSLATION	protein_coding	start	-	3	175	0	0	0	65.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094433	Igkv5-43	ENSMUST00000103368	ENSMUSP00000100169	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.5	0	57	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000038271	Iffo1	ENSMUST00000150417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038271	Iffo1	ENSMUST00000144364	ENSMUSP00000116701	TRANSLATION	nonsense_mediated_decay	-	-	1	372	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038271	Iffo1	ENSMUST00000153006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038271	Iffo1	ENSMUST00000148835	ENSMUSP00000115080	TRANSLATION	protein_coding	start	-	1	381	0	1.4	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038271	Iffo1	ENSMUST00000119527	ENSMUSP00000113376	TRANSLATION	protein_coding	-	CCDS39635.1	1	559	0	1.4	5.1	0	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000038271	Iffo1	ENSMUST00000150474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038271	Iffo1	ENSMUST00000139071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038271	Iffo1	ENSMUST00000135559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038271	Iffo1	ENSMUST00000141230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038271	Iffo1	ENSMUST00000117675	ENSMUSP00000113088	TRANSLATION	protein_coding	-	CCDS39634.1	1	562	0	1.4	5.1	0	0	-4,-6	-	-	8	PRINCIPAL:4
ENSMUSG00000051262	Nat8f3	ENSMUST00000168531	ENSMUSP00000131413	TRANSLATION	protein_coding	-	CCDS20299.1	1	227	22	0.16	0.5	50	2	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051262	Nat8f3	ENSMUST00000050780	ENSMUSP00000093431	TRANSLATION	protein_coding	-	CCDS20299.1	1	227	22	0.16	0.5	50	2	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051262	Nat8f3	ENSMUST00000201219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041477	Dcp1b	ENSMUST00000149651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041477	Dcp1b	ENSMUST00000127059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041477	Dcp1b	ENSMUST00000112777	ENSMUSP00000108397	TRANSLATION	protein_coding	-	CCDS39610.1	1	578	0	3.25	1.5	204.3	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000041477	Dcp1b	ENSMUST00000136437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041477	Dcp1b	ENSMUST00000073909	ENSMUSP00000073568	TRANSLATION	protein_coding	-	-	1	545	0	3.25	1	204.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030067	Foxp1	ENSMUST00000175880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030067	Foxp1	ENSMUST00000176850	ENSMUSP00000135041	TRANSLATION	protein_coding	-	-	5	675	4	5.3	6.5	215	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000030067	Foxp1	ENSMUST00000175886	ENSMUSP00000135517	TRANSLATION	protein_coding	stop	-	3	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000177307	ENSMUSP00000135764	TRANSLATION	protein_coding	-	-	1	706	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000176565	ENSMUSP00000135181	TRANSLATION	protein_coding	-	CCDS85105.1	1	705	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000154163	ENSMUSP00000121404	TRANSLATION	protein_coding	stop	-	5	188	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000138754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030067	Foxp1	ENSMUST00000177235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030067	Foxp1	ENSMUST00000113329	ENSMUSP00000108955	TRANSLATION	protein_coding	-	-	1	641	4	4.3	0	174.2	0	-4,-5	-	-	11.554	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000177208	ENSMUSP00000135187	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000177227	ENSMUSP00000135229	TRANSLATION	protein_coding	stop	-	5	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000113328	ENSMUSP00000108954	TRANSLATION	protein_coding	-	-	1	706	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000113321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030067	Foxp1	ENSMUST00000123992	ENSMUSP00000117550	TRANSLATION	protein_coding	stop	-	5	124	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000177229	ENSMUSP00000134817	TRANSLATION	protein_coding	-	-	5	577	4	5.3	4.1	215	0	-4,-7	-	-	17.128	ALTERNATIVE:2
ENSMUSG00000030067	Foxp1	ENSMUST00000177410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030067	Foxp1	ENSMUST00000113322	ENSMUSP00000108948	TRANSLATION	protein_coding	-	CCDS39578.1	5	705	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000113326	ENSMUSP00000108952	TRANSLATION	protein_coding	-	CCDS57442.1	1	673	4	5.3	6.5	215	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000030067	Foxp1	ENSMUST00000074346	ENSMUSP00000073953	TRANSLATION	protein_coding	-	CCDS39578.1	1	705	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000075832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030067	Foxp1	ENSMUST00000176632	ENSMUSP00000135635	TRANSLATION	protein_coding	-	-	5	674	4	5.3	6.5	215	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000030067	Foxp1	ENSMUST00000177437	ENSMUSP00000135809	TRANSLATION	protein_coding	-	CCDS57441.1	1	576	4	5.3	5.3	215	0	-4,-7	-	-	17.564	ALTERNATIVE:1
ENSMUSG00000030067	Foxp1	ENSMUST00000113324	ENSMUSP00000108950	TRANSLATION	protein_coding	-	-	5	706	4	5.3	0.5	215	0	-4,-5	-	-	16	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000175670	ENSMUSP00000135237	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000142164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030067	Foxp1	ENSMUST00000177230	ENSMUSP00000135098	TRANSLATION	nonsense_mediated_decay	-	-	5	564	4	5.1	0	215	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000177507	ENSMUSP00000134869	TRANSLATION	protein_coding	stop	-	2	107	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000124058	ENSMUSP00000120244	TRANSLATION	protein_coding	stop	-	5	348	4	2.35	0	118.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030067	Foxp1	ENSMUST00000175838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030067	Foxp1	ENSMUST00000131967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030067	Foxp1	ENSMUST00000176105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048930	Tada3	ENSMUST00000125414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048930	Tada3	ENSMUST00000043333	ENSMUSP00000043363	TRANSLATION	protein_coding	-	-	1	413	0	0	0	92.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000048930	Tada3	ENSMUST00000193384	ENSMUSP00000141289	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048930	Tada3	ENSMUST00000113107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048930	Tada3	ENSMUST00000113106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048930	Tada3	ENSMUST00000099118	ENSMUSP00000108736	TRANSLATION	protein_coding	-	-	1	232	0	0	0	92.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000048930	Tada3	ENSMUST00000032410	ENSMUSP00000032410	TRANSLATION	protein_coding	-	CCDS20416.1	1	432	0	0	13.7	92.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040627	Aicda	ENSMUST00000043301	ENSMUSP00000040524	TRANSLATION	protein_coding	-	CCDS20497.1	1	198	5	2.9	15	264.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000040627	Aicda	ENSMUST00000160685	ENSMUSP00000125093	TRANSLATION	protein_coding	-	-	1	60	0	1.1	0	50.4	0	-4,-5	-	-	2.274	MINOR
ENSMUSG00000076548	Igkv4-69	ENSMUST00000103349	ENSMUSP00000100150	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	57.7	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000039629	Strip2	ENSMUST00000130969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039629	Strip2	ENSMUST00000137068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039629	Strip2	ENSMUST00000046028	ENSMUSP00000036477	TRANSLATION	protein_coding	-	CCDS19967.1	1	844	0	0	0.5	338.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039629	Strip2	ENSMUST00000151738	ENSMUSP00000119506	TRANSLATION	protein_coding	-	CCDS85025.1	1	816	0	0	0.5	222.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039629	Strip2	ENSMUST00000115224	ENSMUSP00000110879	TRANSLATION	protein_coding	-	-	1	662	0	0	0	120.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052131	Akr1b7	ENSMUST00000007449	ENSMUSP00000007449	TRANSLATION	protein_coding	-	CCDS19993.1	1	316	30	8.25	4	197.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000023289	Sva	ENSMUST00000117406	ENSMUSP00000112528	TRANSLATION	protein_coding	-	-	1	165	0	0	0	150.1	0	-1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000023289	Sva	ENSMUST00000024059	ENSMUSP00000024059	TRANSLATION	protein_coding	-	CCDS20060.1	1	158	0	0	0.5	150.1	0	2,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000063810	Alms1	ENSMUST00000213058	ENSMUSP00000148796	TRANSLATION	protein_coding	-	-	5	3720	0	0	0.5	133.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000063810	Alms1	ENSMUST00000202809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063810	Alms1	ENSMUST00000072018	ENSMUSP00000071904	TRANSLATION	protein_coding	-	CCDS20298.1	1	3251	0	0	0.5	133.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000063810	Alms1	ENSMUST00000201244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063810	Alms1	ENSMUST00000201221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115343	Vmn1r21	ENSMUST00000226191	ENSMUSP00000154295	TRANSLATION	protein_coding	-	CCDS20186.1	-	297	0	0	1.5	171.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115343	Vmn1r21	ENSMUST00000203310	ENSMUSP00000145398	TRANSLATION	protein_coding	-	CCDS20186.1	2	297	0	0	1.5	171.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115343	Vmn1r21	ENSMUST00000203488	ENSMUSP00000144978	TRANSLATION	protein_coding	-	CCDS20186.1	2	297	0	0	1.5	171.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015766	Eps8	ENSMUST00000147526	ENSMUSP00000120044	TRANSLATION	protein_coding	stop	-	1	587	4	4.982	0	227.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015766	Eps8	ENSMUST00000100841	ENSMUSP00000098402	TRANSLATION	protein_coding	-	CCDS20665.1	1	821	4	7.282	5.1	227.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000015766	Eps8	ENSMUST00000152046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015766	Eps8	ENSMUST00000132920	ENSMUSP00000122517	TRANSLATION	protein_coding	stop	-	5	329	4	3.232	0	184.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015766	Eps8	ENSMUST00000058210	ENSMUSP00000052776	TRANSLATION	protein_coding	-	CCDS20665.1	1	821	4	7.282	5.1	227.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000015766	Eps8	ENSMUST00000134630	ENSMUSP00000120648	TRANSLATION	protein_coding	stop	-	3	14	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015766	Eps8	ENSMUST00000203515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015766	Eps8	ENSMUST00000205037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015766	Eps8	ENSMUST00000139753	ENSMUSP00000145059	TRANSLATION	protein_coding	stop	-	5	38	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015766	Eps8	ENSMUST00000153933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015766	Eps8	ENSMUST00000146442	ENSMUSP00000119997	TRANSLATION	protein_coding	stop	-	2	189	4	3.1	0	179.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015766	Eps8	ENSMUST00000127179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015766	Eps8	ENSMUST00000111878	ENSMUSP00000107509	TRANSLATION	protein_coding	-	CCDS20665.1	1	821	4	7.282	5.1	227.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000042599	Kdm7a	ENSMUST00000127036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042599	Kdm7a	ENSMUST00000002305	ENSMUSP00000002305	TRANSLATION	protein_coding	-	CCDS51753.1	1	940	21	10.9	0.5	72.8	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000096632	Igkv9-124	ENSMUST00000103312	ENSMUSP00000100113	TRANSLATION	IG_V_gene	start/stop	-	-	95	2	1	0	52.8	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096632	Igkv9-124	ENSMUST00000196768	ENSMUSP00000142468	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	52.8	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000030057	Cnbp	ENSMUST00000204104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030057	Cnbp	ENSMUST00000113617	ENSMUSP00000109247	TRANSLATION	protein_coding	-	CCDS85091.1	5	177	28	0.64	8.8	209.1	0	-4,-7	-	-	20.26	MINOR
ENSMUSG00000030057	Cnbp	ENSMUST00000204653	ENSMUSP00000145274	TRANSLATION	protein_coding	-	CCDS85091.1	1	177	28	0.64	8.8	209.1	0	-4,-7	-	-	20.26	MINOR
ENSMUSG00000030057	Cnbp	ENSMUST00000113619	ENSMUSP00000109249	TRANSLATION	protein_coding	-	CCDS85092.1	1	170	28	0.64	14.8	209.1	0	-4,-7	-	-	22	PRINCIPAL:2
ENSMUSG00000030057	Cnbp	ENSMUST00000141961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030057	Cnbp	ENSMUST00000204890	ENSMUSP00000145227	TRANSLATION	protein_coding	-	-	1	171	28	0.64	14.8	209.1	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000030057	Cnbp	ENSMUST00000204596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030057	Cnbp	ENSMUST00000134851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030057	Cnbp	ENSMUST00000032138	ENSMUSP00000032138	TRANSLATION	protein_coding	-	CCDS51841.1	1	178	28	0.6	8.8	209.1	0	-4,-7	-	-	19.888	MINOR
ENSMUSG00000076594	Igkv6-13	ENSMUST00000103395	ENSMUSP00000100196	TRANSLATION	IG_V_gene	start/stop	-	-	95	5	1	0	58.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076594	Igkv6-13	ENSMUST00000198184	ENSMUSP00000143746	TRANSLATION	IG_V_gene	stop	-	-	119	5	1.75	0	57.8	0	2,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000067767	Clec4b2	ENSMUST00000088455	ENSMUSP00000085802	TRANSLATION	protein_coding	-	CCDS20511.1	1	208	7	3.2	1.5	73.6	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033788	Dysf	ENSMUST00000204354	ENSMUSP00000144705	TRANSLATION	protein_coding	-	-	5	2090	20	10.44	5.1	629.7	1	-4,-2	-	-	19.536	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000127459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033788	Dysf	ENSMUST00000128965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033788	Dysf	ENSMUST00000203803	ENSMUSP00000145511	TRANSLATION	protein_coding	-	-	5	2103	20	10.44	0	628	1	-4,-6	-	-	17.886	MINOR
ENSMUSG00000033788	Dysf	ENSMUST00000153860	ENSMUSP00000145518	TRANSLATION	protein_coding	-	-	5	2103	20	10.44	6.3	628	1	-4,-6	-	-	19.886	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000113818	ENSMUSP00000109449	TRANSLATION	protein_coding	-	CCDS85081.1	1	2069	20	10.44	5.1	629.7	1	-4,-2	-	-	19.536	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000113823	ENSMUSP00000109454	TRANSLATION	protein_coding	-	CCDS39535.1	5	2099	20	10.44	5.1	627.8	1	-4,-6	-	-	19.422	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000142711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033788	Dysf	ENSMUST00000152646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033788	Dysf	ENSMUST00000204591	ENSMUSP00000144970	TRANSLATION	protein_coding	-	-	5	2120	20	10.44	5.1	627.8	1	-4,-6	-	-	19.422	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000168387	ENSMUSP00000132297	TRANSLATION	protein_coding	-	-	5	2090	20	10.44	0	628	1	-4,-6	-	-	17.886	MINOR
ENSMUSG00000033788	Dysf	ENSMUST00000203695	ENSMUSP00000145292	TRANSLATION	protein_coding	-	-	5	2114	20	10.44	6.3	629.9	1	-4,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000089595	ENSMUSP00000087022	TRANSLATION	protein_coding	-	-	5	2083	20	10.44	5.1	629.9	1	-4,-2	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000081904	ENSMUSP00000080579	TRANSLATION	protein_coding	-	CCDS39536.1	1	2100	20	10.44	5.1	629.7	1	-4,-2	-	-	19.536	PRINCIPAL:3
ENSMUSG00000033788	Dysf	ENSMUST00000204987	ENSMUSP00000144748	TRANSLATION	protein_coding	-	-	5	2104	20	10.44	5.1	629.9	1	-4,-2	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000033788	Dysf	ENSMUST00000113821	ENSMUSP00000109452	TRANSLATION	protein_coding	-	-	5	2082	20	10.44	5.1	628	1	-4,-6	-	-	19.434	ALTERNATIVE:1
ENSMUSG00000076564	Igkv12-46	ENSMUST00000103365	ENSMUSP00000100166	TRANSLATION	IG_V_gene	stop	-	-	115	2	1	0	58.6	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000057754	Tas2r106	ENSMUST00000076756	ENSMUSP00000076043	TRANSLATION	protein_coding	-	CCDS20610.1	-	308	0	0	1.5	290.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000063568	Jazf1	ENSMUST00000128282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063568	Jazf1	ENSMUST00000074541	ENSMUSP00000074129	TRANSLATION	protein_coding	-	CCDS20152.1	1	243	6	0	15	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000063568	Jazf1	ENSMUST00000136250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071150	Tas2r121	ENSMUST00000095395	ENSMUSP00000093044	TRANSLATION	protein_coding	-	CCDS20618.1	-	305	0	0	1.5	354.5	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030180	Kdm5a	ENSMUST00000152293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030180	Kdm5a	ENSMUST00000142791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030180	Kdm5a	ENSMUST00000124525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030180	Kdm5a	ENSMUST00000005108	ENSMUSP00000005108	TRANSLATION	protein_coding	-	CCDS51889.1	5	1690	18	18.25	8.3	757.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030180	Kdm5a	ENSMUST00000203373	ENSMUSP00000144720	TRANSLATION	protein_coding	start/stop	-	3	153	5	4	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030180	Kdm5a	ENSMUST00000124847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030180	Kdm5a	ENSMUST00000132009	ENSMUSP00000145375	TRANSLATION	nonsense_mediated_decay	-	-	1	621	15	13.6584	0	325.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030180	Kdm5a	ENSMUST00000132599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030180	Kdm5a	ENSMUST00000135802	ENSMUSP00000145021	TRANSLATION	nonsense_mediated_decay	-	-	1	814	18	18.25	0	438.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000693	Loxl3	ENSMUST00000000707	ENSMUSP00000000707	TRANSLATION	protein_coding	-	CCDS20266.1	1	754	0	4.82	1.5	675.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000693	Loxl3	ENSMUST00000101257	ENSMUSP00000098815	TRANSLATION	protein_coding	-	-	1	472	0	3.36	0	360.1	0	2,-2	-	-	3.078	MINOR
ENSMUSG00000000693	Loxl3	ENSMUST00000155502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000693	Loxl3	ENSMUST00000152679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000693	Loxl3	ENSMUST00000204318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059639	Clec4a4	ENSMUST00000079379	ENSMUSP00000078351	TRANSLATION	protein_coding	-	CCDS20509.1	1	236	5	3.36	0.5	74.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000038451	Spsb2	ENSMUST00000052727	ENSMUSP00000060124	TRANSLATION	protein_coding	-	CCDS20529.1	3	264	0	1.78	7.5	114.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038451	Spsb2	ENSMUST00000130160	ENSMUSP00000122149	TRANSLATION	protein_coding	stop	-	3	211	0	1	0	67.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038451	Spsb2	ENSMUST00000112473	ENSMUSP00000108092	TRANSLATION	protein_coding	-	-	-	258	0	1.33	0	68.6	0	-4,-7	-	-	7.746	MINOR
ENSMUSG00000038451	Spsb2	ENSMUST00000143040	ENSMUSP00000118347	TRANSLATION	protein_coding	stop	-	5	244	0	1.78	0	68.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038451	Spsb2	ENSMUST00000047760	ENSMUSP00000041585	TRANSLATION	protein_coding	-	CCDS20529.1	1	264	0	1.78	7.5	114.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029700	Slc13a1	ENSMUST00000031713	ENSMUSP00000031713	TRANSLATION	protein_coding	-	CCDS19940.1	1	594	0	3.22	5.1	329.4	0	0,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000029700	Slc13a1	ENSMUST00000176692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029700	Slc13a1	ENSMUST00000177412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029700	Slc13a1	ENSMUST00000174594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033542	Arhgef5	ENSMUST00000031750	ENSMUSP00000031750	TRANSLATION	protein_coding	-	CCDS51759.1	5	1581	0	6.39	0.5	885.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033542	Arhgef5	ENSMUST00000182924	ENSMUSP00000138192	TRANSLATION	protein_coding	start	-	5	796	0	6.03	0	166.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033542	Arhgef5	ENSMUST00000182647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033542	Arhgef5	ENSMUST00000183313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033542	Arhgef5	ENSMUST00000183094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033542	Arhgef5	ENSMUST00000183227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033542	Arhgef5	ENSMUST00000182190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033542	Arhgef5	ENSMUST00000182752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029992	Gfpt1	ENSMUST00000150410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029992	Gfpt1	ENSMUST00000204872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029992	Gfpt1	ENSMUST00000113655	ENSMUSP00000109285	TRANSLATION	protein_coding	-	-	1	102	0	1	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029992	Gfpt1	ENSMUST00000032057	ENSMUSP00000032057	TRANSLATION	protein_coding	-	-	1	697	38	13.48	3.5	233.2	0	-4,-7	-	-	18.884	MINOR
ENSMUSG00000029992	Gfpt1	ENSMUST00000113657	ENSMUSP00000109287	TRANSLATION	protein_coding	-	-	1	124	6	2.04	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000029992	Gfpt1	ENSMUST00000146410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029992	Gfpt1	ENSMUST00000113658	ENSMUSP00000109288	TRANSLATION	protein_coding	-	CCDS39545.1	1	681	38	13.45	12.3	233.2	0	-4,-7	-	-	21.94	PRINCIPAL:1
ENSMUSG00000076512	Igkv9-123	ENSMUST00000103313	ENSMUSP00000100114	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	49.5	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000029632	Ndufa4	ENSMUST00000203801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029632	Ndufa4	ENSMUST00000204084	ENSMUSP00000145197	TRANSLATION	protein_coding	-	-	3	49	0	0	0	75.1	0	-4,-5	-	-	3.39	MINOR
ENSMUSG00000029632	Ndufa4	ENSMUST00000031637	ENSMUSP00000031637	TRANSLATION	protein_coding	-	-	3	49	0	0	0	75.1	0	-4,-5	-	-	3.39	MINOR
ENSMUSG00000029632	Ndufa4	ENSMUST00000204714	ENSMUSP00000145413	TRANSLATION	protein_coding	-	CCDS39427.1	3	82	0	0	15.3	118.6	1	-1,0	-	-	10	PRINCIPAL:1
ENSMUSG00000029632	Ndufa4	ENSMUST00000204978	ENSMUSP00000144932	TRANSLATION	protein_coding	-	CCDS39427.1	1	82	0	0	15.3	118.6	1	-1,0	-	-	10	PRINCIPAL:1
ENSMUSG00000079852	Klra4	ENSMUST00000119096	ENSMUSP00000114004	TRANSLATION	protein_coding	-	CCDS57457.1	1	263	3	3.7	0.5	228.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029790	Cep41	ENSMUST00000140252	ENSMUSP00000145510	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000115131	ENSMUSP00000110784	TRANSLATION	protein_coding	-	-	5	301	0	1.14	2.4	40.7	0	-4,-2	-	-	12.346	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000031810	ENSMUSP00000031810	TRANSLATION	protein_coding	-	CCDS19978.1	1	373	0	1.14	5.1	43.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029790	Cep41	ENSMUST00000140211	ENSMUSP00000138696	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000169422	ENSMUSP00000128707	TRANSLATION	protein_coding	-	-	3	103	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000133373	ENSMUSP00000116240	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000146951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029790	Cep41	ENSMUST00000115130	ENSMUSP00000110783	TRANSLATION	protein_coding	-	-	1	43	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000029790	Cep41	ENSMUST00000153107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029790	Cep41	ENSMUST00000132763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076552	Igkv4-61	ENSMUST00000103353	ENSMUSP00000100154	TRANSLATION	IG_V_gene	start/stop	-	-	94	2	1	0	62.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076552	Igkv4-61	ENSMUST00000199160	ENSMUSP00000143767	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	62.4	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000076508	Igkv17-127	ENSMUST00000103309	ENSMUSP00000100110	TRANSLATION	IG_V_gene	stop	-	-	113	0	1.5	0	46.1	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076508	Igkv17-127	ENSMUST00000200586	ENSMUSP00000142437	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	46.1	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000059182	Skap2	ENSMUST00000205174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059182	Skap2	ENSMUST00000078214	ENSMUSP00000077342	TRANSLATION	protein_coding	-	-	1	351	7	9.63	0	104.1	0	-4,-5	-	-	17.34	MINOR
ENSMUSG00000059182	Skap2	ENSMUST00000203313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059182	Skap2	ENSMUST00000205112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059182	Skap2	ENSMUST00000203948	ENSMUSP00000145275	TRANSLATION	protein_coding	start/stop	-	5	126	0	3.3	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059182	Skap2	ENSMUST00000204778	ENSMUSP00000145462	TRANSLATION	protein_coding	-	CCDS20137.1	1	358	7	9.96	6.3	104.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000059182	Skap2	ENSMUST00000204178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029701	Rbm28	ENSMUST00000170750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029701	Rbm28	ENSMUST00000164563	ENSMUSP00000127856	TRANSLATION	protein_coding	start	-	5	133	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029701	Rbm28	ENSMUST00000169214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029701	Rbm28	ENSMUST00000007993	ENSMUSP00000007993	TRANSLATION	protein_coding	-	CCDS51733.1	1	750	0	7.74	0.5	179.4	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029701	Rbm28	ENSMUST00000172346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029701	Rbm28	ENSMUST00000170473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029911	Ssbp1	ENSMUST00000117830	ENSMUSP00000113815	TRANSLATION	protein_coding	stop	-	5	76	0	1.75	0	41.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029911	Ssbp1	ENSMUST00000141801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029911	Ssbp1	ENSMUST00000201570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029911	Ssbp1	ENSMUST00000121360	ENSMUSP00000113563	TRANSLATION	protein_coding	-	CCDS39466.1	1	148	0	4	10.8	109.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000029911	Ssbp1	ENSMUST00000117411	ENSMUSP00000114082	TRANSLATION	protein_coding	-	CCDS39466.1	1	148	0	4	10.8	109.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000029911	Ssbp1	ENSMUST00000031971	ENSMUSP00000031971	TRANSLATION	protein_coding	-	CCDS20030.1	1	152	0	3.5	1.5	104.2	0	-4,0	-	-	10.845	MINOR
ENSMUSG00000029911	Ssbp1	ENSMUST00000114779	ENSMUSP00000110427	TRANSLATION	protein_coding	-	CCDS39466.1	1	148	0	4	10.8	109.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000000416	Cttnbp2	ENSMUST00000148602	ENSMUSP00000118432	TRANSLATION	nonsense_mediated_decay	-	-	1	630	0	0.62	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000416	Cttnbp2	ENSMUST00000146775	ENSMUSP00000119383	TRANSLATION	protein_coding	start	-	1	1139	0	4.115	0	90.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000416	Cttnbp2	ENSMUST00000090601	ENSMUSP00000088089	TRANSLATION	protein_coding	-	CCDS39432.1	1	1648	0	4.435	1.5	202.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000416	Cttnbp2	ENSMUST00000139557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000416	Cttnbp2	ENSMUST00000152499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000416	Cttnbp2	ENSMUST00000142963	ENSMUSP00000122590	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	104.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000416	Cttnbp2	ENSMUST00000140416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000416	Cttnbp2	ENSMUST00000141581	ENSMUSP00000123162	TRANSLATION	protein_coding	start/stop	-	5	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000416	Cttnbp2	ENSMUST00000129669	ENSMUSP00000116878	TRANSLATION	protein_coding	stop	-	5	160	0	0.2	0	104.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076591	Igkv8-16	ENSMUST00000103392	ENSMUSP00000100193	TRANSLATION	IG_V_gene	stop	-	-	120	2	1.5	0	47.1	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076591	Igkv8-16	ENSMUST00000195945	ENSMUSP00000142364	TRANSLATION	IG_V_gene	stop	-	-	121	2	1.5	0	47.1	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000048473	Sult6b2	ENSMUST00000156662	ENSMUSP00000138527	TRANSLATION	nonsense_mediated_decay	-	-	2	171	9	2.2	0	68.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048473	Sult6b2	ENSMUST00000111768	ENSMUSP00000107398	TRANSLATION	protein_coding	-	CCDS51950.1	1	290	20	4.64	0.5	209.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000076518	Igkv2-112	ENSMUST00000103318	ENSMUSP00000100119	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	54.6	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076518	Igkv2-112	ENSMUST00000103319	ENSMUSP00000100120	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	54.6	0	2,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000030125	Lrrc23	ENSMUST00000147669	ENSMUSP00000122883	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030125	Lrrc23	ENSMUST00000132492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030125	Lrrc23	ENSMUST00000032218	ENSMUSP00000032218	TRANSLATION	protein_coding	-	CCDS20528.1	5	340	0	3.865	0.5	44.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030125	Lrrc23	ENSMUST00000112475	ENSMUSP00000108094	TRANSLATION	protein_coding	-	CCDS20528.1	1	340	0	3.865	0.5	44.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030125	Lrrc23	ENSMUST00000128697	ENSMUSP00000122362	TRANSLATION	protein_coding	stop	-	3	103	0	0.375	0	10.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035357	Pdzrn3	ENSMUST00000144505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035357	Pdzrn3	ENSMUST00000124884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035357	Pdzrn3	ENSMUST00000239140	ENSMUSP00000158931	TRANSLATION	protein_coding	stop	-	-	504	0	4.9	0	48.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035357	Pdzrn3	ENSMUST00000151175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035357	Pdzrn3	ENSMUST00000075994	ENSMUSP00000075376	TRANSLATION	protein_coding	-	CCDS20392.1	1	1063	11	6.97	1.5	144.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000076569	Igkv5-39	ENSMUST00000103370	ENSMUSP00000100171	TRANSLATION	IG_V_gene	start/stop	-	-	95	0	1	0	61.3	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076569	Igkv5-39	ENSMUST00000197290	ENSMUSP00000142521	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.5	0	61.3	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000034456	Uroc1	ENSMUST00000046128	ENSMUSP00000040424	TRANSLATION	protein_coding	-	CCDS39561.1	1	676	30	11.885	10.8	289.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000034456	Uroc1	ENSMUST00000164761	ENSMUSP00000127114	TRANSLATION	protein_coding	-	CCDS85094.1	1	710	30	11.385	0.5	270.2	0	-4,-7	-	-	15.834	MINOR
ENSMUSG00000093696	Vmn1r7	ENSMUST00000176252	ENSMUSP00000135571	TRANSLATION	protein_coding	-	CCDS51792.1	-	311	0	0	1.5	196.1	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071519	Prss3	ENSMUST00000096003	ENSMUSP00000093702	TRANSLATION	protein_coding	-	CCDS20047.1	1	246	22	4.5	11.9	272	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000062528	Tas2r109	ENSMUST00000067539	ENSMUSP00000069300	TRANSLATION	protein_coding	-	CCDS20631.1	-	316	0	0	1.5	265.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068536	Doxl2	ENSMUST00000184917	ENSMUSP00000139012	TRANSLATION	protein_coding	-	CCDS20120.1	3	723	17	4	1.5	431.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000068536	Doxl2	ENSMUST00000184852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068536	Doxl2	ENSMUST00000090063	ENSMUSP00000087517	TRANSLATION	nonsense_mediated_decay	-	-	1	615	9	2	0	341.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000040121	Rep15	ENSMUST00000036194	ENSMUSP00000037503	TRANSLATION	protein_coding	-	CCDS20704.1	-	230	0	0	1.5	383.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023403	Stk31	ENSMUST00000167846	ENSMUSP00000130561	TRANSLATION	protein_coding	start	-	5	367	0	1.74	0	29.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023403	Stk31	ENSMUST00000172459	ENSMUSP00000132896	TRANSLATION	protein_coding	-	-	5	973	0	4.97	0	144.7	0	-3,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000023403	Stk31	ENSMUST00000163954	ENSMUSP00000127545	TRANSLATION	protein_coding	-	-	5	995	0	4.52	0	138.6	0	-3,-7	-	-	10.734	MINOR
ENSMUSG00000023403	Stk31	ENSMUST00000024171	ENSMUSP00000024171	TRANSLATION	protein_coding	-	CCDS39487.1	1	1018	0	4.97	1.5	144.7	0	-3,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000104769	Igkv8-34	ENSMUST00000196959	ENSMUSP00000142499	TRANSLATION	IG_V_gene	stop	-	-	121	2	1.5	0	59.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000079304	Tex52	ENSMUST00000100926	ENSMUSP00000098486	TRANSLATION	protein_coding	-	CCDS51916.1	1	308	0	0	1.5	513	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000079304	Tex52	ENSMUST00000130785	ENSMUSP00000145112	TRANSLATION	protein_coding	-	-	1	230	0	0	0	347.9	0	-4,-1	-	-	0	MINOR
ENSMUSG00000092047	Gm17631	ENSMUST00000171980	ENSMUSP00000130863	TRANSLATION	protein_coding	start/stop	-	5	23	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000115482	Vmn1r36	ENSMUST00000226829	ENSMUSP00000154183	TRANSLATION	protein_coding	-	CCDS20214.1	-	305	0	0	1.5	181.7	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115482	Vmn1r36	ENSMUST00000226635	ENSMUSP00000153849	TRANSLATION	protein_coding	-	CCDS20214.1	-	305	0	0	1.5	181.7	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115482	Vmn1r36	ENSMUST00000226728	ENSMUSP00000154433	TRANSLATION	protein_coding	-	-	-	199	0	0	0	111.6	4	-4,-6	-	-	1.794	MINOR
ENSMUSG00000115482	Vmn1r36	ENSMUST00000226142	ENSMUSP00000153912	TRANSLATION	protein_coding	-	-	-	268	0	0	0	176.7	7	0,-4	-	-	5.7	MINOR
ENSMUSG00000042541	Sem1	ENSMUST00000041111	ENSMUSP00000040741	TRANSLATION	protein_coding	-	CCDS39422.1	1	70	0	2.25	17	81.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042541	Sem1	ENSMUST00000205180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053217	Tas2r136	ENSMUST00000065532	ENSMUSP00000070791	TRANSLATION	protein_coding	-	CCDS20622.1	-	327	0	0	0.5	220.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000111724	ENSMUSP00000107353	TRANSLATION	protein_coding	-	CCDS39706.1	1	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000111725	ENSMUSP00000107354	TRANSLATION	protein_coding	-	CCDS39706.1	2	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000039729	ENSMUSP00000039433	TRANSLATION	protein_coding	-	CCDS39706.1	1	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000111723	ENSMUSP00000107352	TRANSLATION	protein_coding	-	CCDS39706.1	5	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000126007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040370	Etfrf1	ENSMUST00000111719	ENSMUSP00000107348	TRANSLATION	protein_coding	-	CCDS39706.1	5	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000111726	ENSMUSP00000107355	TRANSLATION	protein_coding	-	CCDS39706.1	1	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040370	Etfrf1	ENSMUST00000111721	ENSMUSP00000107350	TRANSLATION	protein_coding	-	CCDS39706.1	1	86	0	0	17.5	51.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000004347	Pde1c	ENSMUST00000044505	ENSMUSP00000046601	TRANSLATION	protein_coding	-	CCDS51784.1	1	706	5	8.51	6.3	381.7	0	-4,-5	-	-	19	PRINCIPAL:4
ENSMUSG00000004347	Pde1c	ENSMUST00000203967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004347	Pde1c	ENSMUST00000164752	ENSMUSP00000129185	TRANSLATION	protein_coding	-	CCDS51785.1	1	631	5	8.51	5.3	381.7	0	-4,-5	-	-	18.622	ALTERNATIVE:1
ENSMUSG00000004347	Pde1c	ENSMUST00000168944	ENSMUSP00000128364	TRANSLATION	protein_coding	-	CCDS20170.1	1	654	5	8.51	2.9	381.7	0	-4,-5	-	-	17.716	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000203462	ENSMUSP00000145419	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000203372	ENSMUSP00000145508	TRANSLATION	protein_coding	-	-	5	766	5	8.51	5.1	381.7	0	-4,-5	-	-	18.548	ALTERNATIVE:1
ENSMUSG00000004347	Pde1c	ENSMUST00000114327	ENSMUSP00000109966	TRANSLATION	protein_coding	-	CCDS20170.1	1	654	5	8.51	2.9	381.7	0	-4,-5	-	-	17.716	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000170774	ENSMUSP00000133170	TRANSLATION	protein_coding	-	CCDS51786.1	1	617	5	8.51	0.5	381.7	0	-4,-6	-	-	17	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000203689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004347	Pde1c	ENSMUST00000164037	ENSMUSP00000130139	TRANSLATION	protein_coding	-	CCDS51783.1	1	622	5	8.51	0.5	381.7	0	-4,-5	-	-	17	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000204821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004347	Pde1c	ENSMUST00000203492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004347	Pde1c	ENSMUST00000166890	ENSMUSP00000131892	TRANSLATION	protein_coding	-	CCDS51787.1	1	603	5	8.51	0.5	381.7	0	-4,-7	-	-	17	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000239143	ENSMUSP00000158960	TRANSLATION	protein_coding	-	-	-	861	5	8.51	1.5	381.7	0	-4,-1	-	-	17.188	MINOR
ENSMUSG00000004347	Pde1c	ENSMUST00000166102	ENSMUSP00000131350	TRANSLATION	protein_coding	-	CCDS51785.1	1	631	5	8.51	5.3	381.7	0	-4,-5	-	-	18.622	ALTERNATIVE:1
ENSMUSG00000032712	Resf1	ENSMUST00000127680	ENSMUSP00000120770	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032712	Resf1	ENSMUST00000130664	ENSMUSP00000115573	TRANSLATION	protein_coding	stop	-	1	404	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032712	Resf1	ENSMUST00000187881	ENSMUSP00000140491	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032712	Resf1	ENSMUST00000100765	ENSMUSP00000098328	TRANSLATION	protein_coding	-	CCDS20717.1	1	1521	0	0	0.5	1334.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032712	Resf1	ENSMUST00000190785	ENSMUSP00000139624	TRANSLATION	protein_coding	stop	-	1	1173	0	0	0	838.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032712	Resf1	ENSMUST00000046689	ENSMUSP00000041180	TRANSLATION	protein_coding	-	CCDS20717.1	1	1521	0	0	0.5	1334.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032712	Resf1	ENSMUST00000185930	ENSMUSP00000139593	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032712	Resf1	ENSMUST00000189837	ENSMUSP00000139660	TRANSLATION	protein_coding	-	-	1	1519	0	0	0.5	1325.1	0	-4,-5	-	-	5.412	ALTERNATIVE:2
ENSMUSG00000032712	Resf1	ENSMUST00000137983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032712	Resf1	ENSMUST00000189932	ENSMUSP00000140026	TRANSLATION	protein_coding	-	CCDS20717.1	1	1521	0	0	0.5	1334.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032712	Resf1	ENSMUST00000203348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060477	Irak2	ENSMUST00000203381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060477	Irak2	ENSMUST00000089023	ENSMUSP00000086417	TRANSLATION	protein_coding	-	-	1	551	0	6.05	0	95.4	0	-4,-6	-	-	6.204	MINOR
ENSMUSG00000060477	Irak2	ENSMUST00000143948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060477	Irak2	ENSMUST00000113024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060477	Irak2	ENSMUST00000204091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060477	Irak2	ENSMUST00000059286	ENSMUSP00000055073	TRANSLATION	protein_coding	-	CCDS20430.1	1	622	0	7.8	0.5	133.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000060477	Irak2	ENSMUST00000204744	ENSMUSP00000144848	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060477	Irak2	ENSMUST00000089022	ENSMUSP00000086416	TRANSLATION	protein_coding	-	CCDS51873.1	1	574	0	7.3	0.5	133.6	0	-4,-6	-	-	10.992	ALTERNATIVE:2
ENSMUSG00000060477	Irak2	ENSMUST00000155554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038077	Kcna6	ENSMUST00000112242	ENSMUSP00000107861	TRANSLATION	protein_coding	-	CCDS20556.1	-	529	0	0.6	3.9	264.1	2	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038077	Kcna6	ENSMUST00000128137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038077	Kcna6	ENSMUST00000185333	ENSMUSP00000139481	TRANSLATION	protein_coding	-	CCDS20556.1	1	529	0	0.6	3.9	264.1	2	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038077	Kcna6	ENSMUST00000040751	ENSMUSP00000036872	TRANSLATION	nonsense_mediated_decay	-	-	1	529	0	0.6	3.9	264.1	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000000811	Txnrd3	ENSMUST00000000828	ENSMUSP00000000828	TRANSLATION	protein_coding	-	CCDS57436.1	1	615	66	15	1.5	237.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000000811	Txnrd3	ENSMUST00000101171	ENSMUSP00000098730	TRANSLATION	protein_coding	-	CCDS57437.1	1	501	47	13	0.5	186.3	0	-4,-1	-	-	4.938	MINOR
ENSMUSG00000037984	Neurod6	ENSMUST00000044767	ENSMUSP00000047016	TRANSLATION	protein_coding	-	CCDS20168.1	1	337	0	0.4	17	194.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000094973	Eif4a3l1	ENSMUST00000204966	ENSMUSP00000145166	TRANSLATION	protein_coding	stop	-	5	266	13	2	0	105.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094973	Eif4a3l1	ENSMUST00000204530	ENSMUSP00000144809	TRANSLATION	protein_coding	-	CCDS51939.1	1	411	14	3.75	7.6	247.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000094973	Eif4a3l1	ENSMUST00000077886	ENSMUSP00000133154	TRANSLATION	protein_coding	-	CCDS51939.1	-	411	14	3.75	7.6	247.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000047115	Fam221a	ENSMUST00000141910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047115	Fam221a	ENSMUST00000121903	ENSMUSP00000113242	TRANSLATION	protein_coding	-	CCDS51769.1	1	258	0	0	0.5	324.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000047115	Fam221a	ENSMUST00000142950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047115	Fam221a	ENSMUST00000203182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047115	Fam221a	ENSMUST00000134786	ENSMUSP00000114554	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	104.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047115	Fam221a	ENSMUST00000060561	ENSMUSP00000050237	TRANSLATION	protein_coding	-	CCDS20126.1	1	301	0	0	1.7	324.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000030263	Lrmp	ENSMUST00000125029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030263	Lrmp	ENSMUST00000135984	ENSMUSP00000121986	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030263	Lrmp	ENSMUST00000149244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030263	Lrmp	ENSMUST00000132948	ENSMUSP00000120248	TRANSLATION	protein_coding	start	-	1	504	0	0	0	815	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000030263	Lrmp	ENSMUST00000135191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030263	Lrmp	ENSMUST00000156849	ENSMUSP00000115043	TRANSLATION	protein_coding	start/stop	-	5	196	0	0	0	240.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030263	Lrmp	ENSMUST00000143631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030263	Lrmp	ENSMUST00000132937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030263	Lrmp	ENSMUST00000152571	ENSMUSP00000120166	TRANSLATION	protein_coding	stop	-	3	198	0	0	0	160.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030263	Lrmp	ENSMUST00000032396	ENSMUSP00000032396	TRANSLATION	protein_coding	-	CCDS39704.1	1	539	0	0	0.5	870.9	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000107906	Eif4a3l2	ENSMUST00000122096	ENSMUSP00000145194	TRANSLATION	protein_coding	-	-	-	411	14	1	9.6	248.1	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227911	ENSMUSP00000154582	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062818	Vmn1r51	ENSMUST00000226977	ENSMUSP00000153783	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000228590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062818	Vmn1r51	ENSMUST00000226542	ENSMUSP00000153862	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227876	ENSMUSP00000154223	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000228880	ENSMUSP00000154676	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000072859	ENSMUSP00000072637	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227109	ENSMUSP00000153842	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227766	ENSMUSP00000153813	TRANSLATION	protein_coding	-	CCDS39560.1	-	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000227145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062818	Vmn1r51	ENSMUST00000174204	ENSMUSP00000133870	TRANSLATION	protein_coding	-	CCDS39560.1	1	329	0	0	0.5	451.7	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062818	Vmn1r51	ENSMUST00000228433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015733	Capza2	ENSMUST00000156701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015733	Capza2	ENSMUST00000130606	ENSMUSP00000123398	TRANSLATION	nonsense_mediated_decay	-	-	5	174	0	4.25	0	172.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015733	Capza2	ENSMUST00000148694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015733	Capza2	ENSMUST00000015877	ENSMUSP00000015877	TRANSLATION	protein_coding	-	CCDS19926.1	1	286	0	7.5	17	358.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000015733	Capza2	ENSMUST00000152005	ENSMUSP00000145159	TRANSLATION	protein_coding	stop	-	5	169	0	3.875	0	145.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015733	Capza2	ENSMUST00000142592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015733	Capza2	ENSMUST00000136771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037159	Wee2	ENSMUST00000141490	ENSMUSP00000122678	TRANSLATION	protein_coding	stop	-	2	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037159	Wee2	ENSMUST00000202464	ENSMUSP00000144628	TRANSLATION	protein_coding	stop	-	3	209	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037159	Wee2	ENSMUST00000038907	ENSMUSP00000038754	TRANSLATION	protein_coding	-	CCDS20029.1	1	555	18	6.35	1.5	169.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030257	Srgap3	ENSMUST00000131835	ENSMUSP00000130063	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	0.816	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030257	Srgap3	ENSMUST00000060215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030257	Srgap3	ENSMUST00000143475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030257	Srgap3	ENSMUST00000113169	ENSMUSP00000108794	TRANSLATION	protein_coding	-	-	5	1075	0	14.104	8.3	261.8	0	-4,-5	-	-	14.349	ALTERNATIVE:1
ENSMUSG00000030257	Srgap3	ENSMUST00000088373	ENSMUSP00000085712	TRANSLATION	protein_coding	-	CCDS39590.1	1	1099	0	14.106	10.3	261.8	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000030077	Chl1	ENSMUST00000205098	ENSMUSP00000144739	TRANSLATION	protein_coding	-	-	1	428	0	4.21	0	210.5	2	-4,-5	-	-	0	MINOR
ENSMUSG00000030077	Chl1	ENSMUST00000203912	ENSMUSP00000145026	TRANSLATION	protein_coding	-	-	1	1150	0	16.89	0	407.3	2	3,-2	-	-	7.896	MINOR
ENSMUSG00000030077	Chl1	ENSMUST00000204321	ENSMUSP00000144725	TRANSLATION	protein_coding	stop	-	3	152	0	2.44	0	40.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030077	Chl1	ENSMUST00000203489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030077	Chl1	ENSMUST00000203830	ENSMUSP00000144758	TRANSLATION	protein_coding	-	CCDS39582.1	1	1209	0	16.57	7.5	475.7	2	3,-2	-	-	14.358	PRINCIPAL:1
ENSMUSG00000030077	Chl1	ENSMUST00000066905	ENSMUSP00000063933	TRANSLATION	protein_coding	-	CCDS39582.1	1	1209	0	16.57	7.5	475.7	2	3,-2	-	-	14.358	PRINCIPAL:1
ENSMUSG00000030228	Pik3c2g	ENSMUST00000087657	ENSMUSP00000084939	TRANSLATION	protein_coding	-	-	5	653	17	11.23	0.5	251.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030228	Pik3c2g	ENSMUST00000032353	ENSMUSP00000032353	TRANSLATION	protein_coding	-	-	5	401	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000191591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030228	Pik3c2g	ENSMUST00000187448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030228	Pik3c2g	ENSMUST00000187618	ENSMUSP00000141025	TRANSLATION	protein_coding	-	-	1	401	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000185968	ENSMUSP00000140368	TRANSLATION	protein_coding	stop	-	5	402	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000188066	ENSMUSP00000140123	TRANSLATION	protein_coding	stop	-	3	200	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000186585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030228	Pik3c2g	ENSMUST00000187223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030228	Pik3c2g	ENSMUST00000218528	ENSMUSP00000151281	TRANSLATION	protein_coding	start	-	5	903	17	15.25	0	355.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000111868	ENSMUSP00000107499	TRANSLATION	protein_coding	start	-	1	1021	17	15.61	0	396.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000190962	ENSMUSP00000141141	TRANSLATION	protein_coding	-	-	1	401	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030228	Pik3c2g	ENSMUST00000191013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030228	Pik3c2g	ENSMUST00000187069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030228	Pik3c2g	ENSMUST00000189374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004263	Atn1	ENSMUST00000146872	ENSMUSP00000123560	TRANSLATION	protein_coding	stop	-	2	183	0	0	0	114.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004263	Atn1	ENSMUST00000133577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004263	Atn1	ENSMUST00000088357	ENSMUSP00000085695	TRANSLATION	protein_coding	-	CCDS20526.1	1	1175	0	0	0.5	787.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046717	Igbp1b	ENSMUST00000054786	ENSMUSP00000050818	TRANSLATION	protein_coding	-	CCDS20670.1	-	343	0	1	1.5	274.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033933	Vhl	ENSMUST00000131819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033933	Vhl	ENSMUST00000128770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033933	Vhl	ENSMUST00000204915	ENSMUSP00000145326	TRANSLATION	nonsense_mediated_decay	start	-	2	20	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033933	Vhl	ENSMUST00000035673	ENSMUSP00000039418	TRANSLATION	protein_coding	-	CCDS20429.1	1	181	0	3.6	1.5	243.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029775	Klhdc10	ENSMUST00000144272	ENSMUSP00000145063	TRANSLATION	protein_coding	-	-	1	299	0	4.33	1.2	105.2	0	-4,-7	-	-	9.458	MINOR
ENSMUSG00000029775	Klhdc10	ENSMUST00000150854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029775	Klhdc10	ENSMUST00000068259	ENSMUSP00000069669	TRANSLATION	protein_coding	-	CCDS19971.1	1	439	0	4.81	6.4	132.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000029775	Klhdc10	ENSMUST00000135566	ENSMUSP00000144878	TRANSLATION	protein_coding	stop	-	3	54	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029775	Klhdc10	ENSMUST00000123494	ENSMUSP00000145442	TRANSLATION	protein_coding	stop	-	5	157	0	2.76	0	59.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029775	Klhdc10	ENSMUST00000132581	ENSMUSP00000143839	TRANSLATION	protein_coding	start/stop	-	5	313	0	3.56	0	106.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029775	Klhdc10	ENSMUST00000068240	ENSMUSP00000064594	TRANSLATION	protein_coding	-	CCDS80509.1	1	410	0	4.81	6.4	132.8	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000033174	Mgll	ENSMUST00000089449	ENSMUSP00000086872	TRANSLATION	protein_coding	-	CCDS20338.1	1	303	9	7.75	7.5	243.4	0	-4,-6	-	-	19.68	PRINCIPAL:1
ENSMUSG00000033174	Mgll	ENSMUST00000203608	ENSMUSP00000144883	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033174	Mgll	ENSMUST00000113582	ENSMUSP00000109212	TRANSLATION	protein_coding	-	CCDS51844.1	1	258	9	6.75	0.5	153.9	0	-4,-6	-	-	9.312	MINOR
ENSMUSG00000033174	Mgll	ENSMUST00000150180	ENSMUSP00000145068	TRANSLATION	protein_coding	-	-	1	116	3	2.14	0	34.3	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000033174	Mgll	ENSMUST00000113581	ENSMUSP00000109211	TRANSLATION	protein_coding	-	-	5	331	9	8.17	0	230.6	0	-4,-6	-	-	16.752	MINOR
ENSMUSG00000033174	Mgll	ENSMUST00000113585	ENSMUSP00000109215	TRANSLATION	protein_coding	-	CCDS20338.1	1	303	9	7.75	7.5	243.4	0	-4,-6	-	-	19.68	PRINCIPAL:1
ENSMUSG00000033174	Mgll	ENSMUST00000151699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033174	Mgll	ENSMUST00000205045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033174	Mgll	ENSMUST00000163271	ENSMUSP00000127374	TRANSLATION	protein_coding	-	CCDS51843.1	1	319	9	8.41	1.5	243.4	0	-4,-5	-	-	18.231	MINOR
ENSMUSG00000033174	Mgll	ENSMUST00000203824	ENSMUSP00000145364	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000076533	Igkv4-90	ENSMUST00000103334	ENSMUSP00000100135	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	54.2	0	0,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000058446	Znrf2	ENSMUST00000148425	ENSMUSP00000145276	TRANSLATION	nonsense_mediated_decay	start	-	5	75	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058446	Znrf2	ENSMUST00000127331	ENSMUSP00000123316	TRANSLATION	protein_coding	start	-	2	94	4	1.4	0	39.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058446	Znrf2	ENSMUST00000079869	ENSMUSP00000078795	TRANSLATION	protein_coding	-	CCDS20159.1	1	238	4	1.4	0.5	39.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000107478	Gm45234	ENSMUST00000129411	ENSMUSP00000115407	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	1175	0	0	0.5	787.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030123	Plxnd1	ENSMUST00000123165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030123	Plxnd1	ENSMUST00000203628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030123	Plxnd1	ENSMUST00000131590	ENSMUSP00000115650	TRANSLATION	protein_coding	start/stop	-	3	233	0	3.87	0	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030123	Plxnd1	ENSMUST00000205003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030123	Plxnd1	ENSMUST00000015511	ENSMUSP00000015511	TRANSLATION	protein_coding	-	CCDS20448.1	1	1925	0	25.4	1.7	1108.6	0	-1,3	-	-	12	PRINCIPAL:1
ENSMUSG00000038252	Ncapd2	ENSMUST00000189959	ENSMUSP00000139445	TRANSLATION	protein_coding	stop	-	3	162	0	0	0	34.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038252	Ncapd2	ENSMUST00000186210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000189706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000188306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000188665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000188762	ENSMUSP00000140672	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038252	Ncapd2	ENSMUST00000185624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000188410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000186667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000188119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000186561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000191080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038252	Ncapd2	ENSMUST00000043848	ENSMUSP00000042260	TRANSLATION	protein_coding	-	CCDS39636.1	1	1392	0	0	1.5	301.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058250	Tas2r138	ENSMUST00000076565	ENSMUSP00000075876	TRANSLATION	protein_coding	-	CCDS20038.1	-	331	0	0	5.1	210.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000038065	Mturn	ENSMUST00000190641	ENSMUSP00000140586	TRANSLATION	protein_coding	-	CCDS20158.2	1	131	8	0	14.3	268.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038065	Mturn	ENSMUST00000185518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038065	Mturn	ENSMUST00000187701	ENSMUSP00000140358	TRANSLATION	protein_coding	-	CCDS80537.1	5	148	8	0	1.5	261.4	0	-4,-5	-	-	11.738	MINOR
ENSMUSG00000009394	Syn2	ENSMUST00000203768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009394	Syn2	ENSMUST00000204726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009394	Syn2	ENSMUST00000009538	ENSMUSP00000009538	TRANSLATION	protein_coding	-	CCDS51874.1	1	586	22	8.6	1.5	679.1	0	-4,-2	-	-	18	PRINCIPAL:4
ENSMUSG00000009394	Syn2	ENSMUST00000203450	ENSMUSP00000144921	TRANSLATION	protein_coding	-	CCDS51875.1	1	479	22	8.6	1.5	679.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000009394	Syn2	ENSMUST00000203707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009394	Syn2	ENSMUST00000204617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009394	Syn2	ENSMUST00000169345	ENSMUSP00000133121	TRANSLATION	protein_coding	-	CCDS51875.1	1	479	22	8.6	1.5	679.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000033420	Antxr1	ENSMUST00000042025	ENSMUSP00000045634	TRANSLATION	protein_coding	-	CCDS20318.1	1	562	5	6.05	0.5	385.9	1	0,-3	-	-	17	PRINCIPAL:2
ENSMUSG00000033420	Antxr1	ENSMUST00000203563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033420	Antxr1	ENSMUST00000205089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033420	Antxr1	ENSMUST00000204805	ENSMUSP00000145105	TRANSLATION	protein_coding	-	-	5	521	5	6.05	0	366.2	1	0,-3	-	-	15.818	MINOR
ENSMUSG00000033420	Antxr1	ENSMUST00000203131	ENSMUSP00000144853	TRANSLATION	nonsense_mediated_decay	start	-	1	138	2	4.25	0	57.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033420	Antxr1	ENSMUST00000205033	ENSMUSP00000144911	TRANSLATION	protein_coding	-	-	1	500	5	6.05	0	368.4	1	0,-3	-	-	15.95	ALTERNATIVE:2
ENSMUSG00000063415	Cyp26b1	ENSMUST00000204146	ENSMUSP00000145092	TRANSLATION	protein_coding	-	CCDS20289.1	1	512	28	4.68	11.7	201.9	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063415	Cyp26b1	ENSMUST00000205228	ENSMUSP00000144836	TRANSLATION	protein_coding	-	-	1	321	22	2.48	1.7	166.9	0	-4,-5	-	-	7.695	MINOR
ENSMUSG00000063415	Cyp26b1	ENSMUST00000077705	ENSMUSP00000076886	TRANSLATION	protein_coding	-	CCDS20289.1	1	512	28	4.68	11.7	201.9	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063415	Cyp26b1	ENSMUST00000168003	ENSMUSP00000128391	TRANSLATION	protein_coding	-	CCDS20289.1	1	512	28	4.68	11.7	201.9	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063415	Cyp26b1	ENSMUST00000204109	ENSMUSP00000144998	TRANSLATION	protein_coding	-	-	5	437	25	3.68	3.2	173.5	0	-1,-5	-	-	12.918	MINOR
ENSMUSG00000034783	Cd207	ENSMUST00000037882	ENSMUSP00000040746	TRANSLATION	protein_coding	-	CCDS39534.1	1	331	12	3.6	1.5	81.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034203	Chchd4	ENSMUST00000205802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034203	Chchd4	ENSMUST00000040835	ENSMUSP00000041380	TRANSLATION	protein_coding	-	CCDS20367.1	1	139	0	2.33	6.1	36.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000177153	ENSMUSP00000135485	TRANSLATION	nonsense_mediated_decay	-	-	5	955	0	4.9	0	49.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000175889	ENSMUSP00000135629	TRANSLATION	protein_coding	stop	-	1	1042	0	6.4	0	100.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000065842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000177456	ENSMUSP00000134943	TRANSLATION	protein_coding	-	-	5	1292	0	7	1.5	106.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000177338	ENSMUSP00000135634	TRANSLATION	protein_coding	stop	-	1	447	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000176263	ENSMUSP00000134937	TRANSLATION	nonsense_mediated_decay	-	-	5	977	0	4.9	0	49.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000176136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000035813	ENSMUSP00000046906	TRANSLATION	protein_coding	-	CCDS19897.1	1	1095	0	7	1.5	106.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000164110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000168998	ENSMUSP00000126643	TRANSLATION	protein_coding	-	-	1	642	0	4.9	0	49.3	0	-4,-2	-	-	4.392	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000175962	ENSMUSP00000135360	TRANSLATION	protein_coding	-	-	1	533	0	0.9	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032827	Ppp1r9a	ENSMUST00000176729	ENSMUSP00000134909	TRANSLATION	nonsense_mediated_decay	start	-	1	232	0	2.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040613	Apobec1	ENSMUST00000112585	ENSMUSP00000108204	TRANSLATION	protein_coding	-	CCDS20498.1	1	229	5	3.088	1.5	104.4	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000040613	Apobec1	ENSMUST00000112587	ENSMUSP00000108206	TRANSLATION	protein_coding	-	CCDS20498.1	5	229	5	3.088	1.5	104.4	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000040613	Apobec1	ENSMUST00000147760	ENSMUSP00000116238	TRANSLATION	protein_coding	stop	-	5	25	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040613	Apobec1	ENSMUST00000203204	ENSMUSP00000145154	TRANSLATION	protein_coding	stop	-	2	113	5	1.758	0	51.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040613	Apobec1	ENSMUST00000112586	ENSMUSP00000108205	TRANSLATION	protein_coding	-	CCDS20498.1	1	229	5	3.088	1.5	104.4	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000040613	Apobec1	ENSMUST00000203309	ENSMUSP00000145417	TRANSLATION	protein_coding	stop	-	2	121	5	2.088	0	63.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040613	Apobec1	ENSMUST00000203197	ENSMUSP00000144996	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040613	Apobec1	ENSMUST00000143356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040613	Apobec1	ENSMUST00000204035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001517	Foxm1	ENSMUST00000203258	ENSMUSP00000145473	TRANSLATION	protein_coding	start/stop	-	3	214	0	2.6	0	104.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001517	Foxm1	ENSMUST00000203040	ENSMUSP00000145305	TRANSLATION	protein_coding	start/stop	-	3	402	0	3.1	0	104.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001517	Foxm1	ENSMUST00000136395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001517	Foxm1	ENSMUST00000073316	ENSMUSP00000073041	TRANSLATION	protein_coding	-	CCDS20570.1	1	757	0	3.25	1.5	104.4	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000001517	Foxm1	ENSMUST00000125456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001517	Foxm1	ENSMUST00000123988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001517	Foxm1	ENSMUST00000112148	ENSMUSP00000107776	TRANSLATION	protein_coding	-	-	5	742	0	2.75	1	104.4	0	-4,-1	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000001517	Foxm1	ENSMUST00000153423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038759	Nup205	ENSMUST00000202898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038759	Nup205	ENSMUST00000201842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038759	Nup205	ENSMUST00000043815	ENSMUSP00000039656	TRANSLATION	protein_coding	-	CCDS57418.1	1	2008	0	40.43	1.5	1351.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038759	Nup205	ENSMUST00000170234	ENSMUSP00000130033	TRANSLATION	protein_coding	-	-	5	322	0	6.08	0	221.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038759	Nup205	ENSMUST00000201374	ENSMUSP00000144126	TRANSLATION	protein_coding	-	-	1	2061	0	40.232	0	1351.4	0	-4,0	-	-	11.604	ALTERNATIVE:2
ENSMUSG00000038759	Nup205	ENSMUST00000201609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038759	Nup205	ENSMUST00000200739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019689	Fmc1	ENSMUST00000147651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019689	Fmc1	ENSMUST00000019833	ENSMUSP00000019833	TRANSLATION	protein_coding	-	CCDS20014.1	1	113	0	0	13	0	0	-4,0	-	-	4	PRINCIPAL:1
ENSMUSG00000030196	Tas2r103	ENSMUST00000032317	ENSMUSP00000032317	TRANSLATION	protein_coding	-	CCDS51933.1	-	312	0	0	1.5	260.9	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000000627	Sema4f	ENSMUST00000203911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000627	Sema4f	ENSMUST00000125579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000627	Sema4f	ENSMUST00000000641	ENSMUSP00000000641	TRANSLATION	protein_coding	-	CCDS20264.1	1	777	0	9.97	0.5	453.2	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000627	Sema4f	ENSMUST00000203271	ENSMUSP00000144745	TRANSLATION	nonsense_mediated_decay	start	-	5	29	0	0.3	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000030116	Mfap5	ENSMUST00000148517	ENSMUSP00000122863	TRANSLATION	protein_coding	-	CCDS20496.1	1	164	0	0	1.5	192.7	0	2,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000030116	Mfap5	ENSMUST00000118626	ENSMUSP00000113742	TRANSLATION	protein_coding	-	-	3	156	0	0	0	172.3	0	2,-1	-	-	4.776	MINOR
ENSMUSG00000030116	Mfap5	ENSMUST00000125728	ENSMUSP00000118521	TRANSLATION	protein_coding	stop	-	5	28	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000030116	Mfap5	ENSMUST00000032210	ENSMUSP00000032210	TRANSLATION	protein_coding	-	CCDS85155.1	3	152	0	0	1.7	153.3	0	2,-1	-	-	3.636	MINOR
ENSMUSG00000030116	Mfap5	ENSMUST00000126357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030116	Mfap5	ENSMUST00000142896	ENSMUSP00000116769	TRANSLATION	protein_coding	stop	-	5	122	0	0	0	174.2	0	0,-3	-	-	-1	MINOR
ENSMUSG00000030116	Mfap5	ENSMUST00000121656	ENSMUSP00000112596	TRANSLATION	protein_coding	-	-	3	69	0	0	0	66.3	0	2,-2	-	-	0	MINOR
ENSMUSG00000030110	Ret	ENSMUST00000088790	ENSMUSP00000086169	TRANSLATION	protein_coding	-	CCDS39608.1	1	1073	18	16.91	2.7	374.2	1	0,-4	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000030110	Ret	ENSMUST00000032201	ENSMUSP00000032201	TRANSLATION	protein_coding	-	CCDS20470.1	1	1115	18	16.91	3.9	374.2	1	0,-4	-	-	19	PRINCIPAL:3
ENSMUSG00000030170	Wnt5b	ENSMUST00000178696	ENSMUSP00000137065	TRANSLATION	protein_coding	-	CCDS20474.2	1	359	0	1.7	2.9	403	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000030170	Wnt5b	ENSMUST00000118120	ENSMUSP00000112819	TRANSLATION	protein_coding	-	-	1	321	0	1.7	0	403	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030170	Wnt5b	ENSMUST00000117171	ENSMUSP00000113188	TRANSLATION	protein_coding	-	CCDS20474.2	1	359	0	1.7	2.9	403	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000030170	Wnt5b	ENSMUST00000119369	ENSMUSP00000112448	TRANSLATION	protein_coding	-	-	1	372	0	1.7	1.5	403	0	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000041301	Cftr	ENSMUST00000115406	ENSMUSP00000111065	TRANSLATION	protein_coding	-	-	5	1446	23	24.58	0	729.2	18	-4,-7	-	-	11.664	MINOR
ENSMUSG00000041301	Cftr	ENSMUST00000129452	ENSMUSP00000115334	TRANSLATION	protein_coding	-	-	1	529	11	10.5	0	177.8	9	-4,-7	-	-	0	MINOR
ENSMUSG00000041301	Cftr	ENSMUST00000140407	ENSMUSP00000116957	TRANSLATION	nonsense_mediated_decay	-	-	5	576	11	11.962	0	203.2	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000041301	Cftr	ENSMUST00000115405	ENSMUSP00000111064	TRANSLATION	nonsense_mediated_decay	-	-	5	600	11	12.388	0	201.4	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000041301	Cftr	ENSMUST00000140532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041301	Cftr	ENSMUST00000045706	ENSMUSP00000049228	TRANSLATION	protein_coding	-	CCDS19930.1	1	1476	23	25.58	1.5	801.5	18	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000095574	Trbv12-1	ENSMUST00000103267	ENSMUSP00000100083	TRANSLATION	TR_V_gene	stop	-	-	124	0	1	0	55.4	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076531	Igkv4-92	ENSMUST00000103332	ENSMUSP00000100133	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	50.8	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000096051	Vmn1r40	ENSMUST00000228642	ENSMUSP00000154581	TRANSLATION	protein_coding	-	CCDS20346.1	-	310	0	0	1.5	467.2	9	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096051	Vmn1r40	ENSMUST00000227669	ENSMUSP00000154466	TRANSLATION	protein_coding	-	-	-	127	0	0	0	207.8	6	-2,-5	-	-	0	MINOR
ENSMUSG00000096051	Vmn1r40	ENSMUST00000226925	ENSMUSP00000153836	TRANSLATION	protein_coding	-	CCDS20346.1	-	310	0	0	1.5	467.2	9	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096051	Vmn1r40	ENSMUST00000075158	ENSMUSP00000074655	TRANSLATION	protein_coding	-	CCDS20346.1	-	310	0	0	1.5	467.2	9	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096051	Vmn1r40	ENSMUST00000228485	ENSMUSP00000153784	TRANSLATION	protein_coding	-	-	-	127	0	0	0	207.8	6	-2,-5	-	-	0	MINOR
ENSMUSG00000030246	Ldhb	ENSMUST00000239397	ENSMUSP00000159362	TRANSLATION	protein_coding	-	CCDS20684.1	-	334	27	8.5	17.5	252.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030246	Ldhb	ENSMUST00000130817	ENSMUSP00000145467	TRANSLATION	protein_coding	start	-	3	32	4	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030246	Ldhb	ENSMUST00000134191	ENSMUSP00000116014	TRANSLATION	protein_coding	stop	-	2	198	24	5	0	169.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030246	Ldhb	ENSMUST00000204433	ENSMUSP00000145261	TRANSLATION	protein_coding	start	-	3	193	19	4.35	0	132.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030246	Ldhb	ENSMUST00000239395	ENSMUSP00000159378	TRANSLATION	protein_coding	-	-	-	341	27	8.5	3.9	252.6	0	-4,-5	-	-	18.704	MINOR
ENSMUSG00000030246	Ldhb	ENSMUST00000032373	ENSMUSP00000032373	TRANSLATION	protein_coding	-	CCDS20684.1	1	334	27	8.5	17.5	252.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029680	Hyal4	ENSMUST00000031691	ENSMUSP00000031691	TRANSLATION	protein_coding	-	CCDS39441.1	1	481	0	2.4	3.9	448.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000072778	Vmn2r27	ENSMUST00000233936	ENSMUSP00000156733	TRANSLATION	protein_coding	-	-	-	601	5	2.66	0	148.7	0	2,-2	-	-	9.8	MINOR
ENSMUSG00000072778	Vmn2r27	ENSMUST00000100968	ENSMUSP00000098528	TRANSLATION	protein_coding	-	CCDS51904.1	5	857	5	3.26	0.5	350.1	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000094872	Igkv9-120	ENSMUST00000103316	ENSMUSP00000100117	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	45.5	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030279	C2cd5	ENSMUST00000111758	ENSMUSP00000107388	TRANSLATION	protein_coding	-	CCDS51953.1	1	990	9	2.249	5.1	82.7	0	-4,-6	-	-	19.431	MINOR
ENSMUSG00000030279	C2cd5	ENSMUST00000087485	ENSMUSP00000084758	TRANSLATION	protein_coding	-	CCDS51953.1	5	990	9	2.249	5.1	82.7	0	-4,-6	-	-	19.431	MINOR
ENSMUSG00000030279	C2cd5	ENSMUST00000203537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000171349	ENSMUSP00000127834	TRANSLATION	protein_coding	-	CCDS51951.1	5	999	9	2.249	7.5	82.7	0	-4,-6	-	-	20.268	ALTERNATIVE:1
ENSMUSG00000030279	C2cd5	ENSMUST00000203673	ENSMUSP00000145425	TRANSLATION	protein_coding	-	-	5	1052	9	2.249	9.6	82.7	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000030279	C2cd5	ENSMUST00000204655	ENSMUSP00000145019	TRANSLATION	protein_coding	-	CCDS51951.1	5	999	9	2.249	7.5	82.7	0	-4,-6	-	-	20.268	ALTERNATIVE:1
ENSMUSG00000030279	C2cd5	ENSMUST00000203349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000203187	ENSMUSP00000145373	TRANSLATION	protein_coding	-	CCDS51952.1	1	1016	9	2.249	7.5	82.7	0	-4,-6	-	-	20.268	PRINCIPAL:3
ENSMUSG00000030279	C2cd5	ENSMUST00000204043	ENSMUSP00000145382	TRANSLATION	protein_coding	start/stop	-	5	181	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030279	C2cd5	ENSMUST00000204233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000205079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000205119	ENSMUSP00000145397	TRANSLATION	nonsense_mediated_decay	-	-	1	70	3	1.4	0	52.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030279	C2cd5	ENSMUST00000204140	ENSMUSP00000145173	TRANSLATION	protein_coding	stop	-	2	232	9	2.249	0	82.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030279	C2cd5	ENSMUST00000204967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000205117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000204635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030279	C2cd5	ENSMUST00000204160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091541	Vmn1r9	ENSMUST00000171186	ENSMUSP00000125762	TRANSLATION	protein_coding	-	CCDS51793.1	-	299	0	0	1.5	176.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091541	Vmn1r9	ENSMUST00000228714	ENSMUSP00000153808	TRANSLATION	protein_coding	-	CCDS51793.1	-	299	0	0	1.5	176.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091541	Vmn1r9	ENSMUST00000227399	ENSMUSP00000154215	TRANSLATION	protein_coding	-	CCDS51793.1	-	299	0	0	1.5	176.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076462	Trbv2	ENSMUST00000103263	ENSMUSP00000100079	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	52.9	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000030205	Gprc5d	ENSMUST00000032327	ENSMUSP00000032327	TRANSLATION	protein_coding	-	CCDS57462.1	1	344	0	0	5.3	89	7	-4,-7	-	-	7.986	ALTERNATIVE:1
ENSMUSG00000030205	Gprc5d	ENSMUST00000111922	ENSMUSP00000107553	TRANSLATION	protein_coding	-	CCDS39680.1	1	300	0	0	7.5	89	7	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000038871	Bpgm	ENSMUST00000045372	ENSMUSP00000047393	TRANSLATION	protein_coding	-	CCDS19994.1	1	259	13	4.75	15	0	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000038871	Bpgm	ENSMUST00000135743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038871	Bpgm	ENSMUST00000149131	ENSMUSP00000121818	TRANSLATION	protein_coding	stop	-	3	166	10	2.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038871	Bpgm	ENSMUST00000138668	ENSMUSP00000115825	TRANSLATION	protein_coding	stop	-	3	112	8	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038871	Bpgm	ENSMUST00000139067	ENSMUSP00000120794	TRANSLATION	protein_coding	stop	-	3	132	10	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041741	Pde3a	ENSMUST00000043259	ENSMUSP00000038749	TRANSLATION	protein_coding	-	CCDS20676.1	1	1141	10	6.8	1.5	204.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000041741	Pde3a	ENSMUST00000189060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045095	Magi1	ENSMUST00000089317	ENSMUSP00000086730	TRANSLATION	protein_coding	-	CCDS20377.1	1	1471	0	14.19	1.7	601.4	0	-4,-6	-	-	11.598	PRINCIPAL:3
ENSMUSG00000045095	Magi1	ENSMUST00000055224	ENSMUSP00000062085	TRANSLATION	protein_coding	-	CCDS20378.1	1	1171	0	12.738	1.7	512.9	0	-4,-6	-	-	3.384	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000203034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045095	Magi1	ENSMUST00000205116	ENSMUSP00000145251	TRANSLATION	protein_coding	stop	-	2	117	0	1.55	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000204532	ENSMUSP00000144769	TRANSLATION	nonsense_mediated_decay	-	-	1	496	0	5.35	0	204.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000203688	ENSMUSP00000145515	TRANSLATION	protein_coding	-	CCDS85098.1	1	1020	0	12.781	0.5	503	0	-4,-5	-	-	2.88	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000203519	ENSMUSP00000145244	TRANSLATION	protein_coding	stop	-	1	1115	0	12.488	0	507.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000204167	ENSMUSP00000145200	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000204788	ENSMUSP00000145434	TRANSLATION	protein_coding	start	-	2	132	0	1.16	0	115.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000093769	ENSMUSP00000091283	TRANSLATION	protein_coding	-	CCDS39573.1	1	1255	0	12.948	0.5	496.4	0	-4,-5	-	-	3.114	MINOR
ENSMUSG00000045095	Magi1	ENSMUST00000204347	ENSMUSP00000144881	TRANSLATION	protein_coding	-	CCDS85099.1	1	1280	0	14.39	2.9	600.8	0	-4,-6	-	-	11.964	ALTERNATIVE:2
ENSMUSG00000030346	Rad51ap1	ENSMUST00000202897	ENSMUSP00000144327	TRANSLATION	nonsense_mediated_decay	-	-	3	70	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030346	Rad51ap1	ENSMUST00000112220	ENSMUSP00000107839	TRANSLATION	protein_coding	-	CCDS85161.1	1	336	0	0	1.5	60	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000030346	Rad51ap1	ENSMUST00000201760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030346	Rad51ap1	ENSMUST00000202191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030346	Rad51ap1	ENSMUST00000201102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030346	Rad51ap1	ENSMUST00000202835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030346	Rad51ap1	ENSMUST00000144954	ENSMUSP00000122978	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030346	Rad51ap1	ENSMUST00000112221	ENSMUSP00000107841	TRANSLATION	protein_coding	-	CCDS39644.1	1	337	0	0	1.5	60	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000030346	Rad51ap1	ENSMUST00000123837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030346	Rad51ap1	ENSMUST00000141212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040649	Rimklb	ENSMUST00000068242	ENSMUSP00000064467	TRANSLATION	protein_coding	-	CCDS39622.1	1	387	21	3.08	12.8	0	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000040649	Rimklb	ENSMUST00000204045	ENSMUSP00000144727	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040649	Rimklb	ENSMUST00000146274	ENSMUSP00000138104	TRANSLATION	nonsense_mediated_decay	-	-	2	251	21	2.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040649	Rimklb	ENSMUST00000204731	ENSMUSP00000144770	TRANSLATION	protein_coding	-	-	1	330	21	2.68	0.5	0	0	-4,-7	-	-	11.202	MINOR
ENSMUSG00000040649	Rimklb	ENSMUST00000143701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040649	Rimklb	ENSMUST00000135320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040649	Rimklb	ENSMUST00000205114	ENSMUSP00000145122	TRANSLATION	protein_coding	stop	-	5	71	0	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049037	Clec4a1	ENSMUST00000060484	ENSMUSP00000062441	TRANSLATION	protein_coding	-	CCDS20507.1	1	245	3	3.42	0.5	73.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000115236	Vmn1r11	ENSMUST00000228235	ENSMUSP00000154621	TRANSLATION	protein_coding	-	-	-	262	0	0	0	184.6	3	-4,-5	-	-	5.454	MINOR
ENSMUSG00000115236	Vmn1r11	ENSMUST00000226968	ENSMUSP00000154588	TRANSLATION	protein_coding	-	CCDS20175.1	-	299	0	0	1.5	193.7	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115236	Vmn1r11	ENSMUST00000071304	ENSMUSP00000071272	TRANSLATION	protein_coding	-	CCDS20175.1	-	299	0	0	1.5	193.7	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030329	Pianp	ENSMUST00000032479	ENSMUSP00000032479	TRANSLATION	protein_coding	-	CCDS20540.1	1	278	0	0	0.5	33.4	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000030329	Pianp	ENSMUST00000160704	ENSMUSP00000124160	TRANSLATION	protein_coding	-	CCDS20540.1	1	278	0	0	0.5	33.4	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000030329	Pianp	ENSMUST00000160666	ENSMUSP00000125328	TRANSLATION	protein_coding	start/stop	-	1	69	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030329	Pianp	ENSMUST00000159391	ENSMUSP00000124024	TRANSLATION	protein_coding	stop	-	1	167	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030329	Pianp	ENSMUST00000161292	ENSMUSP00000125600	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030329	Pianp	ENSMUST00000162000	ENSMUSP00000145297	TRANSLATION	protein_coding	-	-	5	272	0	0	0	33.4	1	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000030329	Pianp	ENSMUST00000162170	ENSMUSP00000123940	TRANSLATION	protein_coding	-	CCDS20540.1	1	278	0	0	0.5	33.4	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000001158	Snrnp27	ENSMUST00000001186	ENSMUSP00000001186	TRANSLATION	protein_coding	-	CCDS20315.1	1	155	0	0	6.3	124.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000001158	Snrnp27	ENSMUST00000113683	ENSMUSP00000109313	TRANSLATION	protein_coding	-	-	1	191	0	0	0	75.7	0	-4,-7	-	-	3.066	MINOR
ENSMUSG00000001158	Snrnp27	ENSMUST00000131674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001158	Snrnp27	ENSMUST00000133404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036938	Try5	ENSMUST00000173916	ENSMUSP00000133640	TRANSLATION	protein_coding	stop	-	5	135	12	3	0	159.9	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000036938	Try5	ENSMUST00000064324	ENSMUSP00000064498	TRANSLATION	protein_coding	-	CCDS20045.1	1	246	22	5.5	8.6	271.6	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000030232	Aebp2	ENSMUST00000032359	ENSMUSP00000032359	TRANSLATION	protein_coding	-	CCDS20674.1	1	274	12	2	2.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030232	Aebp2	ENSMUST00000095350	ENSMUSP00000092993	TRANSLATION	protein_coding	-	CCDS39689.2	1	504	12	2	0.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030232	Aebp2	ENSMUST00000160836	ENSMUSP00000124148	TRANSLATION	protein_coding	-	CCDS80631.1	1	288	12	2	1.7	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030232	Aebp2	ENSMUST00000160772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030232	Aebp2	ENSMUST00000162903	ENSMUSP00000123897	TRANSLATION	protein_coding	start	-	5	180	4	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030232	Aebp2	ENSMUST00000204724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030232	Aebp2	ENSMUST00000162100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030232	Aebp2	ENSMUST00000161335	ENSMUSP00000125479	TRANSLATION	protein_coding	-	CCDS80631.1	1	288	12	2	1.7	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030232	Aebp2	ENSMUST00000087614	ENSMUSP00000084896	TRANSLATION	protein_coding	-	CCDS20673.1	1	496	12	2	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000068232	Vmn1r42	ENSMUST00000226436	ENSMUSP00000154788	TRANSLATION	protein_coding	-	CCDS57439.1	-	329	0	0	1.5	431.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068232	Vmn1r42	ENSMUST00000227279	ENSMUSP00000154442	TRANSLATION	protein_coding	-	CCDS57439.1	-	329	0	0	1.5	431.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068232	Vmn1r42	ENSMUST00000089419	ENSMUSP00000086840	TRANSLATION	protein_coding	-	CCDS57439.1	-	329	0	0	1.5	431.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030336	Cd27	ENSMUST00000112282	ENSMUSP00000107901	TRANSLATION	protein_coding	-	CCDS39638.1	1	146	0	0.8	0.5	0	2	1,-3	-	-	1.848	MINOR
ENSMUSG00000030336	Cd27	ENSMUST00000151527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030336	Cd27	ENSMUST00000152650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030336	Cd27	ENSMUST00000112281	ENSMUSP00000107900	TRANSLATION	protein_coding	-	CCDS71839.1	3	190	0	1.8	0.5	0	2	1,-3	-	-	4.152	MINOR
ENSMUSG00000030336	Cd27	ENSMUST00000135205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030336	Cd27	ENSMUST00000032486	ENSMUSP00000032486	TRANSLATION	protein_coding	-	CCDS39639.1	1	250	0	2.6	1.5	0	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000025821	Zfp282	ENSMUST00000061890	ENSMUSP00000053643	TRANSLATION	protein_coding	-	CCDS20100.1	1	666	20	0.6	1.5	188.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025821	Zfp282	ENSMUST00000125957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055874	Foxi3	ENSMUST00000163089	ENSMUSP00000125380	TRANSLATION	protein_coding	-	-	5	425	0	0.6	0	133.8	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000055874	Foxi3	ENSMUST00000069634	ENSMUSP00000065664	TRANSLATION	protein_coding	-	CCDS51804.1	5	399	0	0.6	0.5	133.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000094525	Trbv12-2	ENSMUST00000103269	ENSMUSP00000100085	TRANSLATION	TR_V_gene	stop	-	-	124	0	1	0	56.3	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000052144	Ppp4r2	ENSMUST00000204001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052144	Ppp4r2	ENSMUST00000203580	ENSMUSP00000145102	TRANSLATION	protein_coding	start	-	5	300	0	0	0	143.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052144	Ppp4r2	ENSMUST00000063854	ENSMUSP00000066314	TRANSLATION	protein_coding	-	CCDS20391.1	1	417	0	0	1.5	256.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052144	Ppp4r2	ENSMUST00000203067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052144	Ppp4r2	ENSMUST00000203940	ENSMUSP00000144898	TRANSLATION	protein_coding	start/stop	-	3	229	0	0	0	147.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000081721	ENSMUSP00000080419	TRANSLATION	protein_coding	-	CCDS20096.1	1	746	21	19.16	12.8	124.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000029687	Ezh2	ENSMUST00000203857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029687	Ezh2	ENSMUST00000170327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029687	Ezh2	ENSMUST00000169889	ENSMUSP00000126481	TRANSLATION	nonsense_mediated_decay	start	-	3	156	0	4.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000171614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029687	Ezh2	ENSMUST00000165492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029687	Ezh2	ENSMUST00000092648	ENSMUSP00000090318	TRANSLATION	protein_coding	-	-	5	704	21	18.16	0	124.3	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000170311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029687	Ezh2	ENSMUST00000164006	ENSMUSP00000133195	TRANSLATION	nonsense_mediated_decay	start	-	5	123	0	2.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000114618	ENSMUSP00000110265	TRANSLATION	protein_coding	-	CCDS51760.1	1	742	21	18.83	7.6	124.3	0	-4,-5	-	-	19.576	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000133043	ENSMUSP00000118663	TRANSLATION	protein_coding	stop	-	1	233	0	6.5	0	58.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000167278	ENSMUSP00000128542	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000114616	ENSMUSP00000110263	TRANSLATION	protein_coding	-	-	5	707	21	18.16	2.4	124.3	0	-4,-5	-	-	16.478	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000204243	ENSMUSP00000144781	TRANSLATION	protein_coding	start	-	3	127	10	3.75	0	22	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029687	Ezh2	ENSMUST00000204798	ENSMUSP00000144780	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	2.5148	0	58.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054435	Gimap4	ENSMUST00000121957	ENSMUSP00000113016	TRANSLATION	protein_coding	-	CCDS39481.2	2	89	17	1.75	0.5	32.2	0	-4,-5	-	-	1.02	MINOR
ENSMUSG00000054435	Gimap4	ENSMUST00000156770	ENSMUSP00000122070	TRANSLATION	nonsense_mediated_decay	-	-	1	69	13	1.25	0	52.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054435	Gimap4	ENSMUST00000119575	ENSMUSP00000113989	TRANSLATION	protein_coding	-	CCDS57422.1	3	58	8	0.75	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054435	Gimap4	ENSMUST00000118802	ENSMUSP00000112530	TRANSLATION	protein_coding	-	CCDS57421.1	3	200	18	1.99	0.5	52.9	0	-4,-5	-	-	1.5	MINOR
ENSMUSG00000054435	Gimap4	ENSMUST00000090070	ENSMUSP00000087524	TRANSLATION	protein_coding	-	CCDS20110.1	2	328	28	4.24	0.5	259.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054435	Gimap4	ENSMUST00000067506	ENSMUSP00000068398	TRANSLATION	protein_coding	-	CCDS57423.1	1	219	27	4	0.5	237.5	0	-4,-5	-	-	15.54	MINOR
ENSMUSG00000002897	Il17ra	ENSMUST00000204078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002897	Il17ra	ENSMUST00000002976	ENSMUSP00000002976	TRANSLATION	protein_coding	-	CCDS20482.1	1	864	0	7.305	0.5	555.7	0	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002897	Il17ra	ENSMUST00000204239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025702	Marchf8	ENSMUST00000101032	ENSMUSP00000098594	TRANSLATION	protein_coding	-	CCDS20451.1	1	286	9	1.93	5.5	57.6	5	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025702	Marchf8	ENSMUST00000126376	ENSMUSP00000145270	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000130445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025702	Marchf8	ENSMUST00000204918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025702	Marchf8	ENSMUST00000079012	ENSMUSP00000078024	TRANSLATION	protein_coding	-	CCDS20451.1	1	286	9	1.93	5.5	57.6	5	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025702	Marchf8	ENSMUST00000123405	ENSMUSP00000144936	TRANSLATION	protein_coding	-	-	5	568	9	1.93	1.5	57.6	5	-4,-6	-	-	18.222	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000129170	ENSMUSP00000145054	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000156014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025702	Marchf8	ENSMUST00000123246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025702	Marchf8	ENSMUST00000203193	ENSMUSP00000145137	TRANSLATION	protein_coding	-	CCDS85138.1	1	247	9	1.93	0.5	57.6	5	-4,-2	-	-	18	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000203116	ENSMUSP00000145237	TRANSLATION	protein_coding	stop	-	5	45	0	0.33	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000204657	ENSMUSP00000145351	TRANSLATION	protein_coding	stop	-	3	176	9	1.93	0	57.6	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000205066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025702	Marchf8	ENSMUST00000140884	ENSMUSP00000145060	TRANSLATION	protein_coding	stop	-	5	79	1	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000135901	ENSMUSP00000115510	TRANSLATION	protein_coding	stop	-	3	232	9	1.93	0	57.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000025702	Marchf8	ENSMUST00000127992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030156	Cd69	ENSMUST00000203727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030156	Cd69	ENSMUST00000205190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030156	Cd69	ENSMUST00000205032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030156	Cd69	ENSMUST00000204411	ENSMUSP00000144734	TRANSLATION	protein_coding	-	-	1	158	0	3	0	45.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030156	Cd69	ENSMUST00000032259	ENSMUSP00000032259	TRANSLATION	protein_coding	-	CCDS20582.1	1	199	0	3	1.5	45.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030145	Zfp248	ENSMUST00000189168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030145	Zfp248	ENSMUST00000069292	ENSMUSP00000068807	TRANSLATION	protein_coding	-	CCDS51884.1	1	576	28	1.85	1.5	249.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030145	Zfp248	ENSMUST00000159403	ENSMUSP00000125400	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	22.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030145	Zfp248	ENSMUST00000161519	ENSMUSP00000124539	TRANSLATION	protein_coding	-	-	1	475	28	0.6	0.5	172.7	0	-4,-5	-	-	9.336	MINOR
ENSMUSG00000030145	Zfp248	ENSMUST00000159254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030145	Zfp248	ENSMUST00000161176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030145	Zfp248	ENSMUST00000162275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071428	Vmn1r27	ENSMUST00000228530	ENSMUSP00000154236	TRANSLATION	protein_coding	-	CCDS20192.1	-	303	0	0	1.5	168.6	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071428	Vmn1r27	ENSMUST00000095862	ENSMUSP00000093547	TRANSLATION	protein_coding	-	CCDS20192.1	-	303	0	0	1.5	168.6	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071428	Vmn1r27	ENSMUST00000226666	ENSMUSP00000154455	TRANSLATION	protein_coding	-	-	-	253	0	0	0	154.8	5	-4,-7	-	-	5.172	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000133978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055850	Rnf181	ENSMUST00000205399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055850	Rnf181	ENSMUST00000151063	ENSMUSP00000138670	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000125554	ENSMUSP00000138229	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000126065	ENSMUSP00000138309	TRANSLATION	nonsense_mediated_decay	start	-	2	46	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000206319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055850	Rnf181	ENSMUST00000154098	ENSMUSP00000138327	TRANSLATION	protein_coding	-	CCDS85064.1	1	118	8	1.89	0.5	53.9	0	-4,-5	-	-	17.43	ALTERNATIVE:2
ENSMUSG00000055850	Rnf181	ENSMUST00000069580	ENSMUSP00000066128	TRANSLATION	protein_coding	-	CCDS20240.1	1	165	8	2.088	1.5	53.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000055850	Rnf181	ENSMUST00000149296	ENSMUSP00000138442	TRANSLATION	nonsense_mediated_decay	start	-	5	26	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000114095	ENSMUSP00000109729	TRANSLATION	protein_coding	-	-	3	206	6	1.638	0	38.7	0	-4,-5	-	-	13.512	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000129233	ENSMUSP00000138365	TRANSLATION	nonsense_mediated_decay	start	-	2	42	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000069595	ENSMUSP00000070370	TRANSLATION	protein_coding	-	-	1	97	8	1.808	0	53.9	0	-4,-5	-	-	17.196	ALTERNATIVE:2
ENSMUSG00000055850	Rnf181	ENSMUST00000130064	ENSMUSP00000115187	TRANSLATION	protein_coding	start	-	3	109	8	2.008	0	53.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055850	Rnf181	ENSMUST00000136707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046733	Gprc5a	ENSMUST00000050104	ENSMUSP00000061062	TRANSLATION	protein_coding	-	CCDS20644.1	1	356	0	0	1.5	94.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030306	Tmtc1	ENSMUST00000140797	ENSMUSP00000115543	TRANSLATION	nonsense_mediated_decay	-	-	5	570	0	1.6	0	144.4	7	-3,-5	-	-	-1	MINOR
ENSMUSG00000030306	Tmtc1	ENSMUST00000060095	ENSMUSP00000056353	TRANSLATION	protein_coding	-	CCDS51960.1	1	942	0	7.8	5.1	271	8	-2,0	-	-	14	PRINCIPAL:1
ENSMUSG00000030306	Tmtc1	ENSMUST00000203991	ENSMUSP00000144991	TRANSLATION	protein_coding	stop	-	3	208	0	0	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000030306	Tmtc1	ENSMUST00000100772	ENSMUSP00000098335	TRANSLATION	protein_coding	-	CCDS85189.1	2	904	0	7	0.5	245.2	8	-2,0	-	-	8.85	MINOR
ENSMUSG00000044155	Lsm8	ENSMUST00000201141	ENSMUSP00000144884	TRANSLATION	protein_coding	-	-	3	100	5	1.75	0	47.6	0	-4,-5	-	-	13.202	MINOR
ENSMUSG00000044155	Lsm8	ENSMUST00000056398	ENSMUSP00000057238	TRANSLATION	protein_coding	-	CCDS39433.1	1	96	5	2.58	21.5	69.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000044155	Lsm8	ENSMUST00000136982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044155	Lsm8	ENSMUST00000128526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029708	Gcc1	ENSMUST00000090511	ENSMUSP00000087997	TRANSLATION	protein_coding	-	CCDS19951.1	1	778	0	0	6.3	56.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000029708	Gcc1	ENSMUST00000170767	ENSMUSP00000130379	TRANSLATION	protein_coding	stop	-	2	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029708	Gcc1	ENSMUST00000064377	ENSMUSP00000067395	TRANSLATION	protein_coding	-	CCDS19951.1	1	778	0	0	6.3	56.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000029708	Gcc1	ENSMUST00000165455	ENSMUSP00000132415	TRANSLATION	protein_coding	start	-	3	194	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068302	Noto	ENSMUST00000174469	ENSMUSP00000134424	TRANSLATION	protein_coding	start	-	2	135	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000068302	Noto	ENSMUST00000089578	ENSMUSP00000087006	TRANSLATION	protein_coding	-	CCDS20293.1	1	240	0	1.6	0.5	70.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000043932	Klri2	ENSMUST00000050385	ENSMUSP00000052805	TRANSLATION	protein_coding	-	CCDS20594.1	1	248	3	2.2	1.5	30.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038784	Cnot4	ENSMUST00000202143	ENSMUSP00000144352	TRANSLATION	protein_coding	-	CCDS80519.1	1	639	9	4.15	14.8	52.5	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000038784	Cnot4	ENSMUST00000044163	ENSMUSP00000044137	TRANSLATION	protein_coding	-	CCDS19999.1	1	575	9	4.15	6.5	52.5	0	-4,-5	-	-	19.596	MINOR
ENSMUSG00000038784	Cnot4	ENSMUST00000200954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038784	Cnot4	ENSMUST00000114993	ENSMUSP00000110645	TRANSLATION	protein_coding	-	CCDS51747.1	1	710	9	4.15	14.8	52.5	0	-4,-5	-	-	22	PRINCIPAL:4
ENSMUSG00000038784	Cnot4	ENSMUST00000114989	ENSMUSP00000110640	TRANSLATION	protein_coding	-	CCDS51746.1	1	642	9	4.15	14.8	52.5	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000038784	Cnot4	ENSMUST00000202417	ENSMUSP00000144409	TRANSLATION	protein_coding	-	CCDS80520.1	1	572	9	4.15	6.5	52.5	0	-4,-5	-	-	19.596	MINOR
ENSMUSG00000038784	Cnot4	ENSMUST00000202666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038784	Cnot4	ENSMUST00000200743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029861	Fam131b	ENSMUST00000031891	ENSMUSP00000031891	TRANSLATION	protein_coding	-	CCDS51758.1	1	348	0	0	1.5	374.7	0	-4,-5	-	-	6.188	MINOR
ENSMUSG00000029861	Fam131b	ENSMUST00000143278	ENSMUSP00000116779	TRANSLATION	protein_coding	-	CCDS39472.2	1	360	0	0	6.3	374.7	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000029861	Fam131b	ENSMUST00000095974	ENSMUSP00000093670	TRANSLATION	protein_coding	-	CCDS71759.1	1	332	0	0	4.1	374.7	0	-4,-6	-	-	7.17	ALTERNATIVE:2
ENSMUSG00000063884	Ptcd3	ENSMUST00000206879	ENSMUSP00000146260	TRANSLATION	nonsense_mediated_decay	-	-	1	284	0	6.574	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000063884	Ptcd3	ENSMUST00000206762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000205269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000206284	ENSMUSP00000145566	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	1.25	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000063884	Ptcd3	ENSMUST00000205420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000205761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000205691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000205556	ENSMUSP00000145813	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	0.88	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063884	Ptcd3	ENSMUST00000205293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063884	Ptcd3	ENSMUST00000082094	ENSMUSP00000080743	TRANSLATION	protein_coding	-	CCDS20235.1	1	685	0	14.792	0.5	49.8	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000063884	Ptcd3	ENSMUST00000206631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058119	Gm5771	ENSMUST00000049079	ENSMUSP00000039684	TRANSLATION	protein_coding	-	CCDS20048.1	1	245	22	4.5	13.1	270.8	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000038074	Fkbp14	ENSMUST00000143312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038074	Fkbp14	ENSMUST00000154907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038074	Fkbp14	ENSMUST00000155047	ENSMUSP00000114521	TRANSLATION	nonsense_mediated_decay	-	-	1	118	0	2.5	0	80.8	0	2,-3	-	-	-1	MINOR
ENSMUSG00000038074	Fkbp14	ENSMUST00000123832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038074	Fkbp14	ENSMUST00000117375	ENSMUSP00000112526	TRANSLATION	protein_coding	-	-	1	117	5	2.75	0	83.4	0	-4,-5	-	-	10.16	MINOR
ENSMUSG00000038074	Fkbp14	ENSMUST00000141757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038074	Fkbp14	ENSMUST00000046520	ENSMUSP00000046070	TRANSLATION	protein_coding	-	CCDS20157.1	1	211	5	4.5	6.3	139.1	0	2,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000071477	Zfp777	ENSMUST00000095944	ENSMUSP00000093637	TRANSLATION	protein_coding	-	CCDS85035.1	1	841	36	1.6	1.5	274.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000071477	Zfp777	ENSMUST00000148362	ENSMUSP00000116303	TRANSLATION	protein_coding	start	-	3	227	0	1	0	109.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071477	Zfp777	ENSMUST00000114583	ENSMUSP00000110230	TRANSLATION	protein_coding	-	CCDS39477.1	5	885	36	1.6	0.5	274.3	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000071477	Zfp777	ENSMUST00000125385	ENSMUSP00000123597	TRANSLATION	protein_coding	stop	-	2	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071477	Zfp777	ENSMUST00000147281	ENSMUSP00000117227	TRANSLATION	protein_coding	stop	-	2	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029863	Casp2	ENSMUST00000031895	ENSMUSP00000031895	TRANSLATION	protein_coding	-	CCDS20064.1	1	452	4	7	5.1	219.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000029863	Casp2	ENSMUST00000132246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029863	Casp2	ENSMUST00000156829	ENSMUSP00000121184	TRANSLATION	nonsense_mediated_decay	-	-	5	343	4	4	1.2	157.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029863	Casp2	ENSMUST00000203089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029863	Casp2	ENSMUST00000152893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029863	Casp2	ENSMUST00000132398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029863	Casp2	ENSMUST00000141727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029863	Casp2	ENSMUST00000141669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029863	Casp2	ENSMUST00000139930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029863	Casp2	ENSMUST00000144821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062519	Zfp398	ENSMUST00000079881	ENSMUSP00000078806	TRANSLATION	protein_coding	-	CCDS20099.1	1	643	31	0.6	5.1	234.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000062519	Zfp398	ENSMUST00000146202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062519	Zfp398	ENSMUST00000114598	ENSMUSP00000110245	TRANSLATION	protein_coding	-	CCDS39476.1	1	511	31	0.6	1.5	203.2	0	-4,-5	-	-	16.36	MINOR
ENSMUSG00000030108	Slc6a13	ENSMUST00000142021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030108	Slc6a13	ENSMUST00000064580	ENSMUSP00000066779	TRANSLATION	protein_coding	-	CCDS20490.1	1	602	0	11.804	3.9	829.4	12	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030108	Slc6a13	ENSMUST00000142144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030108	Slc6a13	ENSMUST00000142419	ENSMUSP00000120689	TRANSLATION	protein_coding	stop	-	5	192	0	2.95	0	255.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000095670	Vmn1r30	ENSMUST00000228635	ENSMUSP00000154098	TRANSLATION	protein_coding	-	CCDS51797.1	-	302	0	0	1.5	175	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095670	Vmn1r30	ENSMUST00000078890	ENSMUSP00000087336	TRANSLATION	protein_coding	-	CCDS51797.1	-	302	0	0	1.5	175	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095670	Vmn1r30	ENSMUST00000227466	ENSMUSP00000154766	TRANSLATION	protein_coding	-	CCDS51797.1	-	302	0	0	1.5	175	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095670	Vmn1r30	ENSMUST00000226334	ENSMUSP00000153952	TRANSLATION	protein_coding	-	CCDS51797.1	-	302	0	0	1.5	175	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095670	Vmn1r30	ENSMUST00000228577	ENSMUSP00000153898	TRANSLATION	protein_coding	-	CCDS51797.1	-	302	0	0	1.5	175	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057697	Vmn1r53	ENSMUST00000076086	ENSMUSP00000075455	TRANSLATION	protein_coding	-	CCDS20355.1	-	310	0	0	1.5	454.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030307	Slc6a11	ENSMUST00000032451	ENSMUSP00000032451	TRANSLATION	protein_coding	-	CCDS39597.1	1	627	0	11.36	2.7	823.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030307	Slc6a11	ENSMUST00000203105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072772	Grcc10	ENSMUST00000140423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072772	Grcc10	ENSMUST00000129823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072772	Grcc10	ENSMUST00000137318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072772	Grcc10	ENSMUST00000004389	ENSMUSP00000004389	TRANSLATION	protein_coding	-	CCDS20525.1	1	126	0	0	8.3	134	0	-3,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000030061	Uba3	ENSMUST00000204056	ENSMUSP00000145309	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030061	Uba3	ENSMUST00000164744	ENSMUSP00000130954	TRANSLATION	protein_coding	-	CCDS51859.1	1	448	23	12.58	19.5	311.1	0	-4,-5	-	-	20.998	ALTERNATIVE:1
ENSMUSG00000030061	Uba3	ENSMUST00000204917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030061	Uba3	ENSMUST00000204391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030061	Uba3	ENSMUST00000203215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030061	Uba3	ENSMUST00000089287	ENSMUSP00000086701	TRANSLATION	protein_coding	-	CCDS51860.1	1	462	23	13.08	19.5	311.1	0	-4,-5	-	-	22	PRINCIPAL:4
ENSMUSG00000030051	Aplf	ENSMUST00000203209	ENSMUSP00000145358	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030051	Aplf	ENSMUST00000032130	ENSMUSP00000032130	TRANSLATION	protein_coding	-	CCDS51839.1	1	499	9	4.716	0.5	93.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030051	Aplf	ENSMUST00000065997	ENSMUSP00000066232	TRANSLATION	protein_coding	-	CCDS20324.1	1	478	9	3.716	0.5	93.4	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000030051	Aplf	ENSMUST00000203776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030218	Mgp	ENSMUST00000032342	ENSMUSP00000032342	TRANSLATION	protein_coding	-	CCDS20659.1	1	104	0	0	7.6	0	0	3,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000030218	Mgp	ENSMUST00000203103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023456	Tpi1	ENSMUST00000154883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023456	Tpi1	ENSMUST00000239432	ENSMUSP00000159368	TRANSLATION	protein_coding	-	CCDS20530.2	-	299	11	6.5	0.5	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000023456	Tpi1	ENSMUST00000133251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023456	Tpi1	ENSMUST00000172132	ENSMUSP00000130858	TRANSLATION	protein_coding	-	-	1	249	11	6.5	14.3	0	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000023456	Tpi1	ENSMUST00000139716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023456	Tpi1	ENSMUST00000149610	ENSMUSP00000125292	TRANSLATION	protein_coding	-	-	2	167	9	4.5	2.4	0	0	-4,-6	-	-	7.086	MINOR
ENSMUSG00000023456	Tpi1	ENSMUST00000204602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034083	Ccdc174	ENSMUST00000136090	ENSMUSP00000146317	TRANSLATION	nonsense_mediated_decay	-	-	2	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034083	Ccdc174	ENSMUST00000037783	ENSMUSP00000049280	TRANSLATION	protein_coding	-	CCDS20370.2	1	467	0	0	0.5	96.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034083	Ccdc174	ENSMUST00000147188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034083	Ccdc174	ENSMUST00000138868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034083	Ccdc174	ENSMUST00000151378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034083	Ccdc174	ENSMUST00000139240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034083	Ccdc174	ENSMUST00000149546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029925	Tbxas1	ENSMUST00000159226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029925	Tbxas1	ENSMUST00000162521	ENSMUSP00000125406	TRANSLATION	protein_coding	-	-	1	124	0	1.3	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000029925	Tbxas1	ENSMUST00000161781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029925	Tbxas1	ENSMUST00000003017	ENSMUSP00000003017	TRANSLATION	protein_coding	-	CCDS20018.1	1	533	31	8.44	1.5	311.8	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029925	Tbxas1	ENSMUST00000161360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029925	Tbxas1	ENSMUST00000162656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029925	Tbxas1	ENSMUST00000160963	ENSMUSP00000124640	TRANSLATION	protein_coding	start/stop	-	3	134	6	2.7	0	52.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029815	Malsu1	ENSMUST00000205243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029815	Malsu1	ENSMUST00000128616	ENSMUSP00000122941	TRANSLATION	protein_coding	-	CCDS51768.1	1	228	0	1.6	1.5	91.3	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000029815	Malsu1	ENSMUST00000114500	ENSMUSP00000110144	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000029815	Malsu1	ENSMUST00000031839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029815	Malsu1	ENSMUST00000139726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068794	Col28a1	ENSMUST00000134731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068794	Col28a1	ENSMUST00000123163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068794	Col28a1	ENSMUST00000213284	ENSMUSP00000150110	TRANSLATION	protein_coding	stop	-	5	234	4	0.58	0	80.5	0	3,-3	-	-	-1	MINOR
ENSMUSG00000068794	Col28a1	ENSMUST00000115537	ENSMUSP00000111199	TRANSLATION	protein_coding	-	CCDS39424.1	1	1141	9	12.835	1.5	281.2	0	3,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000030050	Gkn1	ENSMUST00000032129	ENSMUSP00000032129	TRANSLATION	protein_coding	-	CCDS20319.1	1	184	0	0	2.9	88.8	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000076575	Igkv7-33	ENSMUST00000103376	ENSMUSP00000100177	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	47.9	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076575	Igkv7-33	ENSMUST00000197429	ENSMUSP00000142396	TRANSLATION	IG_V_gene	stop	-	-	121	0	1.5	0	47.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000038279	Nop2	ENSMUST00000044200	ENSMUSP00000047123	TRANSLATION	protein_coding	-	CCDS51912.1	1	794	15	6.42	0.5	347.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038279	Nop2	ENSMUST00000204185	ENSMUSP00000145333	TRANSLATION	protein_coding	stop	-	3	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030124	Lag3	ENSMUST00000032217	ENSMUSP00000032217	TRANSLATION	protein_coding	-	CCDS20536.1	1	521	0	1.18	0.5	23.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030124	Lag3	ENSMUST00000139571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002413	Braf	ENSMUST00000167073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002413	Braf	ENSMUST00000002487	ENSMUSP00000002487	TRANSLATION	protein_coding	-	CCDS39463.1	1	804	18	10.45	0.5	351.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002413	Braf	ENSMUST00000167169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002413	Braf	ENSMUST00000101497	ENSMUSP00000099036	TRANSLATION	protein_coding	start	-	5	750	18	10.45	0	351.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002413	Braf	ENSMUST00000169647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067591	Klra3	ENSMUST00000111998	ENSMUSP00000107629	TRANSLATION	protein_coding	-	CCDS20601.1	1	266	3	4.2	0.5	231.3	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000067591	Klra3	ENSMUST00000088017	ENSMUSP00000085333	TRANSLATION	protein_coding	-	CCDS20601.1	1	266	3	4.2	0.5	231.3	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000041698	Slco1a1	ENSMUST00000168119	ENSMUSP00000132386	TRANSLATION	protein_coding	-	-	1	616	0	0	0	625.3	10	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000041698	Slco1a1	ENSMUST00000171651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041698	Slco1a1	ENSMUST00000042119	ENSMUSP00000037022	TRANSLATION	protein_coding	-	CCDS39691.1	1	670	0	0	0.5	625.3	11	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000029917	Qrfprl	ENSMUST00000136016	ENSMUSP00000121875	TRANSLATION	protein_coding	start/stop	-	1	116	0	1.591	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029917	Qrfprl	ENSMUST00000170608	ENSMUSP00000130225	TRANSLATION	protein_coding	-	CCDS20206.2	1	416	0	4.471	1.5	187.7	9	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029917	Qrfprl	ENSMUST00000133352	ENSMUSP00000122416	TRANSLATION	protein_coding	stop	-	5	161	0	1.2	0	52.5	5	-4,-2	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000204458	ENSMUSP00000145144	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000203137	ENSMUSP00000144757	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000203864	ENSMUSP00000145252	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000204560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030083	Abtb1	ENSMUST00000204327	ENSMUSP00000145110	TRANSLATION	nonsense_mediated_decay	start	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000032169	ENSMUSP00000032169	TRANSLATION	protein_coding	-	CCDS20339.1	1	478	0	5.946	3.9	164.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030083	Abtb1	ENSMUST00000203460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030083	Abtb1	ENSMUST00000204932	ENSMUSP00000144922	TRANSLATION	nonsense_mediated_decay	-	-	2	40	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000203514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030083	Abtb1	ENSMUST00000203272	ENSMUSP00000144802	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000205082	ENSMUSP00000144915	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030083	Abtb1	ENSMUST00000203120	ENSMUSP00000145338	TRANSLATION	nonsense_mediated_decay	start	-	3	16	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055027	Smyd1	ENSMUST00000114188	ENSMUSP00000109826	TRANSLATION	protein_coding	-	-	5	456	24	9.16	0	73.2	0	-4,-5	-	-	12.618	MINOR
ENSMUSG00000055027	Smyd1	ENSMUST00000129630	ENSMUSP00000133300	TRANSLATION	protein_coding	-	-	1	69	4	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055027	Smyd1	ENSMUST00000173297	ENSMUSP00000133878	TRANSLATION	protein_coding	-	-	5	21	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055027	Smyd1	ENSMUST00000173730	ENSMUSP00000134399	TRANSLATION	protein_coding	start	-	5	58	0	1.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055027	Smyd1	ENSMUST00000074301	ENSMUSP00000073911	TRANSLATION	protein_coding	-	CCDS51805.1	1	490	28	10.16	10.8	80.2	0	-4,-5	-	-	20.784	ALTERNATIVE:1
ENSMUSG00000055027	Smyd1	ENSMUST00000114186	ENSMUSP00000109824	TRANSLATION	protein_coding	-	CCDS20227.2	1	477	28	9.66	10.8	83.2	0	-4,-5	-	-	19.998	PRINCIPAL:3
ENSMUSG00000002588	Pon1	ENSMUST00000176945	ENSMUSP00000135728	TRANSLATION	protein_coding	-	-	5	181	5	4	0	0	0	3,-4	-	-	2.664	MINOR
ENSMUSG00000002588	Pon1	ENSMUST00000176933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002588	Pon1	ENSMUST00000177159	ENSMUSP00000135195	TRANSLATION	protein_coding	stop	-	5	256	7	6	0	21.8	0	3,-4	-	-	-1	MINOR
ENSMUSG00000002588	Pon1	ENSMUST00000002663	ENSMUSP00000002663	TRANSLATION	protein_coding	-	CCDS19898.1	1	355	10	8.75	5.1	132.2	0	3,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000030243	Recql	ENSMUST00000123912	ENSMUSP00000122409	TRANSLATION	protein_coding	start	-	3	61	0	0.78	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030243	Recql	ENSMUST00000141504	ENSMUSP00000119452	TRANSLATION	protein_coding	start	-	1	235	4	4.78	0	73.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030243	Recql	ENSMUST00000138578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030243	Recql	ENSMUST00000154870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030243	Recql	ENSMUST00000203772	ENSMUSP00000145179	TRANSLATION	protein_coding	stop	-	5	167	12	3.1	0	40.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030243	Recql	ENSMUST00000032370	ENSMUSP00000032370	TRANSLATION	protein_coding	-	CCDS57465.1	1	631	17	12.63	0.5	198.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030243	Recql	ENSMUST00000129694	ENSMUSP00000122328	TRANSLATION	protein_coding	stop	-	5	167	12	3.1	0	40.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030243	Recql	ENSMUST00000100832	ENSMUSP00000098394	TRANSLATION	protein_coding	-	CCDS57466.1	1	634	17	12.63	0.5	198.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030243	Recql	ENSMUST00000155149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030243	Recql	ENSMUST00000128082	ENSMUSP00000120951	TRANSLATION	protein_coding	stop	-	2	85	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030243	Recql	ENSMUST00000143102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030243	Recql	ENSMUST00000111803	ENSMUSP00000107434	TRANSLATION	protein_coding	-	CCDS39695.1	1	648	17	12.63	0.5	198.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000034245	Hdac11	ENSMUST00000143621	ENSMUSP00000121624	TRANSLATION	protein_coding	stop	-	5	172	0	2.364	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034245	Hdac11	ENSMUST00000155007	ENSMUSP00000120923	TRANSLATION	protein_coding	start	-	5	264	0	2.064	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034245	Hdac11	ENSMUST00000041736	ENSMUSP00000043828	TRANSLATION	protein_coding	-	CCDS20366.1	1	347	3	5.094	6.3	165.9	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000034245	Hdac11	ENSMUST00000134154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034245	Hdac11	ENSMUST00000127768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034245	Hdac11	ENSMUST00000204776	ENSMUSP00000145014	TRANSLATION	nonsense_mediated_decay	start	-	1	26	0	0.564	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034245	Hdac11	ENSMUST00000154389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057137	Tmem140	ENSMUST00000202999	ENSMUSP00000144113	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	90.4	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000057137	Tmem140	ENSMUST00000123019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057137	Tmem140	ENSMUST00000202764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057137	Tmem140	ENSMUST00000201749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057137	Tmem140	ENSMUST00000074949	ENSMUSP00000074482	TRANSLATION	protein_coding	-	CCDS19996.1	1	185	0	0	1.5	301.4	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057137	Tmem140	ENSMUST00000202010	ENSMUSP00000144511	TRANSLATION	protein_coding	stop	-	2	21	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005069	Pex5	ENSMUST00000150899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005069	Pex5	ENSMUST00000112532	ENSMUSP00000108151	TRANSLATION	protein_coding	-	CCDS20517.1	1	639	0	7.55	8.8	61.3	0	-4,-5	-	-	15	PRINCIPAL:4
ENSMUSG00000005069	Pex5	ENSMUST00000112530	ENSMUSP00000108149	TRANSLATION	protein_coding	-	-	5	632	0	7.55	0	61.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000005069	Pex5	ENSMUST00000035861	ENSMUSP00000049132	TRANSLATION	protein_coding	-	CCDS20517.1	1	639	0	7.55	8.8	61.3	0	-4,-5	-	-	15	PRINCIPAL:4
ENSMUSG00000005069	Pex5	ENSMUST00000150812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005069	Pex5	ENSMUST00000112531	ENSMUSP00000108150	TRANSLATION	protein_coding	-	CCDS20518.1	1	602	0	7.55	6.4	61.3	0	-4,-5	-	-	14.076	ALTERNATIVE:1
ENSMUSG00000005069	Pex5	ENSMUST00000156415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005069	Pex5	ENSMUST00000080557	ENSMUSP00000079398	TRANSLATION	protein_coding	-	CCDS20518.1	1	602	0	7.55	6.4	61.3	0	-4,-5	-	-	14.076	ALTERNATIVE:1
ENSMUSG00000054641	Mmrn1	ENSMUST00000204333	ENSMUSP00000145156	TRANSLATION	protein_coding	-	CCDS85058.1	1	1209	7	0.48	0.5	147.7	0	2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000054641	Mmrn1	ENSMUST00000145763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054641	Mmrn1	ENSMUST00000129603	ENSMUSP00000119609	TRANSLATION	protein_coding	-	CCDS51799.1	1	1210	7	0.48	0.5	147.7	0	2,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000043131	Mob1a	ENSMUST00000155580	ENSMUSP00000144927	TRANSLATION	protein_coding	stop	-	3	46	2	1.5	0	78.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043131	Mob1a	ENSMUST00000055261	ENSMUSP00000054452	TRANSLATION	protein_coding	-	CCDS39533.1	1	216	4	5.5	19.5	282.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000043131	Mob1a	ENSMUST00000101245	ENSMUSP00000098802	TRANSLATION	nonsense_mediated_decay	-	-	1	216	4	5.5	19.5	282.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043131	Mob1a	ENSMUST00000038658	ENSMUSP00000039115	TRANSLATION	protein_coding	-	-	1	140	2	3.5	0	100.6	0	-4,-7	-	-	3.998	MINOR
ENSMUSG00000043131	Mob1a	ENSMUST00000146420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043131	Mob1a	ENSMUST00000133045	ENSMUSP00000144795	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000015112	Slc25a13	ENSMUST00000188414	ENSMUSP00000139571	TRANSLATION	protein_coding	-	CCDS39421.1	1	676	4	11.565	8.3	248.6	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000015112	Slc25a13	ENSMUST00000203990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015112	Slc25a13	ENSMUST00000015256	ENSMUSP00000015256	TRANSLATION	protein_coding	-	CCDS39421.1	1	676	4	11.565	8.3	248.6	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000015112	Slc25a13	ENSMUST00000203551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015112	Slc25a13	ENSMUST00000177698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076563	Igkv5-48	ENSMUST00000103364	ENSMUSP00000100165	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.5	0	51.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000053907	Mat2a	ENSMUST00000206904	ENSMUSP00000146319	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053907	Mat2a	ENSMUST00000206783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053907	Mat2a	ENSMUST00000205384	ENSMUSP00000146301	TRANSLATION	protein_coding	start/stop	-	5	192	9	4.25	0	207.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053907	Mat2a	ENSMUST00000206368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053907	Mat2a	ENSMUST00000206900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053907	Mat2a	ENSMUST00000059472	ENSMUSP00000087118	TRANSLATION	protein_coding	-	CCDS39515.1	1	395	17	9	13.5	534	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000053907	Mat2a	ENSMUST00000206962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053907	Mat2a	ENSMUST00000206692	ENSMUSP00000145603	TRANSLATION	protein_coding	-	-	1	365	17	8	2.5	489.3	0	-4,-5	-	-	13.8	MINOR
ENSMUSG00000053907	Mat2a	ENSMUST00000205335	ENSMUSP00000145696	TRANSLATION	protein_coding	-	-	1	362	17	8	2.5	487.8	0	-4,-5	-	-	13.71	MINOR
ENSMUSG00000053907	Mat2a	ENSMUST00000205823	ENSMUSP00000145983	TRANSLATION	protein_coding	start	-	5	55	0	0.7	0	25.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056755	Grm7	ENSMUST00000173001	ENSMUSP00000134233	TRANSLATION	protein_coding	start	-	5	74	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056755	Grm7	ENSMUST00000172951	ENSMUSP00000133957	TRANSLATION	protein_coding	-	CCDS39587.1	1	915	21	8.42	7.5	607.1	6	3,-1	-	-	21	PRINCIPAL:3
ENSMUSG00000056755	Grm7	ENSMUST00000174310	ENSMUSP00000133897	TRANSLATION	protein_coding	start	-	3	75	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056755	Grm7	ENSMUST00000071076	ENSMUSP00000064404	TRANSLATION	protein_coding	-	CCDS85110.1	5	922	21	8.42	7.5	607.1	6	3,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000056755	Grm7	ENSMUST00000174018	ENSMUSP00000134635	TRANSLATION	nonsense_mediated_decay	-	-	1	188	9	1	0	76.7	0	3,-1	-	-	-1	MINOR
ENSMUSG00000052631	Sh2d6	ENSMUST00000089687	ENSMUSP00000087117	TRANSLATION	protein_coding	-	-	5	296	0	3.208	0	37	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000052631	Sh2d6	ENSMUST00000235004	ENSMUSP00000157366	TRANSLATION	protein_coding	-	-	-	250	0	3.208	0.5	37	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052631	Sh2d6	ENSMUST00000162561	ENSMUSP00000124673	TRANSLATION	protein_coding	-	-	1	250	0	3.208	0.5	37	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000052631	Sh2d6	ENSMUST00000160761	ENSMUSP00000157201	TRANSLATION	nonsense_mediated_decay	-	-	5	213	0	0.264	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000052631	Sh2d6	ENSMUST00000159877	ENSMUSP00000123776	TRANSLATION	protein_coding	-	-	1	250	0	3.208	0.5	37	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000052631	Sh2d6	ENSMUST00000234615	ENSMUSP00000157379	TRANSLATION	protein_coding	-	-	-	357	0	3.208	0.5	37	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000052631	Sh2d6	ENSMUST00000159577	ENSMUSP00000157033	TRANSLATION	nonsense_mediated_decay	-	-	3	112	0	0.264	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052631	Sh2d6	ENSMUST00000234038	ENSMUSP00000157110	TRANSLATION	protein_coding	-	-	-	250	0	3.208	0.5	37	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052631	Sh2d6	ENSMUST00000234220	ENSMUSP00000157185	TRANSLATION	protein_coding	-	-	-	276	0	3.208	0	37	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052631	Sh2d6	ENSMUST00000160123	ENSMUSP00000157091	TRANSLATION	protein_coding	-	-	5	251	0	2.808	0	31	0	-4,-2	-	-	10.23	MINOR
ENSMUSG00000033152	Podxl2	ENSMUST00000140455	ENSMUSP00000120870	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033152	Podxl2	ENSMUST00000142266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033152	Podxl2	ENSMUST00000145944	ENSMUSP00000117954	TRANSLATION	protein_coding	-	CCDS85093.1	5	603	0	0	0.5	245.1	2	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000033152	Podxl2	ENSMUST00000141348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033152	Podxl2	ENSMUST00000141401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033152	Podxl2	ENSMUST00000153852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033152	Podxl2	ENSMUST00000124562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033152	Podxl2	ENSMUST00000061262	ENSMUSP00000058985	TRANSLATION	protein_coding	-	CCDS20340.1	1	539	0	0	0.5	245.1	2	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033152	Podxl2	ENSMUST00000135843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033152	Podxl2	ENSMUST00000038409	ENSMUSP00000040417	TRANSLATION	protein_coding	-	CCDS20340.1	1	539	0	0	0.5	245.1	2	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033152	Podxl2	ENSMUST00000145780	ENSMUSP00000120460	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033152	Podxl2	ENSMUST00000205158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005503	Evx1	ENSMUST00000129243	ENSMUSP00000119111	TRANSLATION	protein_coding	-	-	3	201	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005503	Evx1	ENSMUST00000031787	ENSMUSP00000031787	TRANSLATION	protein_coding	-	CCDS20149.1	1	416	3	1.33	0.5	73.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034192	Lsm3	ENSMUST00000206947	ENSMUSP00000145568	TRANSLATION	protein_coding	-	CCDS20369.1	1	102	5	3.08	21.5	71.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000034192	Lsm3	ENSMUST00000126253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034192	Lsm3	ENSMUST00000040607	ENSMUSP00000044178	TRANSLATION	protein_coding	-	CCDS20369.1	1	102	5	3.08	21.5	71.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000034192	Lsm3	ENSMUST00000205609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034192	Lsm3	ENSMUST00000123569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038836	Agbl3	ENSMUST00000115009	ENSMUSP00000110661	TRANSLATION	protein_coding	-	-	5	49	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038836	Agbl3	ENSMUST00000155726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038836	Agbl3	ENSMUST00000202017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038836	Agbl3	ENSMUST00000143474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038836	Agbl3	ENSMUST00000135304	ENSMUSP00000118303	TRANSLATION	nonsense_mediated_decay	-	-	1	185	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038836	Agbl3	ENSMUST00000115014	ENSMUSP00000110666	TRANSLATION	protein_coding	-	CCDS80516.1	1	129	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038836	Agbl3	ENSMUST00000115017	ENSMUSP00000110669	TRANSLATION	protein_coding	-	CCDS19995.2	1	1001	9	1.64	0.5	63.3	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000038836	Agbl3	ENSMUST00000115012	ENSMUSP00000110664	TRANSLATION	protein_coding	-	-	3	49	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038836	Agbl3	ENSMUST00000155890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038836	Agbl3	ENSMUST00000115016	ENSMUSP00000110668	TRANSLATION	protein_coding	-	CCDS80515.1	1	1006	9	1.64	0.5	63.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038836	Agbl3	ENSMUST00000148834	ENSMUSP00000116066	TRANSLATION	nonsense_mediated_decay	-	-	1	185	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029553	Tfec	ENSMUST00000201406	ENSMUSP00000144445	TRANSLATION	protein_coding	start	-	-	28	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029553	Tfec	ENSMUST00000201104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029553	Tfec	ENSMUST00000031533	ENSMUSP00000031533	TRANSLATION	protein_coding	-	CCDS19920.1	1	317	0	2.83	1.5	148.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029553	Tfec	ENSMUST00000202997	ENSMUSP00000143880	TRANSLATION	nonsense_mediated_decay	-	-	1	127	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029553	Tfec	ENSMUST00000200984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030302	Atp2b2	ENSMUST00000154738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030302	Atp2b2	ENSMUST00000101044	ENSMUSP00000098605	TRANSLATION	protein_coding	-	CCDS85130.1	1	1243	7	10.125	6.5	482.7	4	-4,-5	-	-	20.49	PRINCIPAL:1
ENSMUSG00000030302	Atp2b2	ENSMUST00000144507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030302	Atp2b2	ENSMUST00000089003	ENSMUSP00000086398	TRANSLATION	protein_coding	-	CCDS20433.1	1	1198	7	9.3	7.5	483.5	4	-4,-5	-	-	19.35	MINOR
ENSMUSG00000030302	Atp2b2	ENSMUST00000205052	ENSMUSP00000145174	TRANSLATION	protein_coding	-	-	1	1194	7	9.3	7.5	483.5	4	-4,-5	-	-	19.35	MINOR
ENSMUSG00000030302	Atp2b2	ENSMUST00000152831	ENSMUSP00000138165	TRANSLATION	nonsense_mediated_decay	-	-	1	1154	7	9.3	4.1	450.5	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000030302	Atp2b2	ENSMUST00000101045	ENSMUSP00000098606	TRANSLATION	protein_coding	-	CCDS20433.1	1	1198	7	9.3	7.5	483.5	4	-4,-5	-	-	19.35	MINOR
ENSMUSG00000030302	Atp2b2	ENSMUST00000135199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029821	Gsdme	ENSMUST00000031845	ENSMUSP00000031845	TRANSLATION	protein_coding	-	CCDS20130.1	1	512	0	0	0.5	544.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029821	Gsdme	ENSMUST00000101405	ENSMUSP00000098952	TRANSLATION	protein_coding	-	-	1	399	0	0	0.5	461	0	-4,-5	-	-	0.978	MINOR
ENSMUSG00000029821	Gsdme	ENSMUST00000170142	ENSMUSP00000126759	TRANSLATION	protein_coding	-	CCDS20130.1	1	512	0	0	0.5	544.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029821	Gsdme	ENSMUST00000204700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029821	Gsdme	ENSMUST00000167893	ENSMUSP00000132062	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	175	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029821	Gsdme	ENSMUST00000165099	ENSMUSP00000130522	TRANSLATION	protein_coding	-	-	1	424	0	0	0	497.2	0	-4,-5	-	-	3.15	MINOR
ENSMUSG00000029821	Gsdme	ENSMUST00000204417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093661	Eif4e3	ENSMUST00000032151	ENSMUSP00000032151	TRANSLATION	protein_coding	-	CCDS20386.1	1	207	0	5.75	0.5	136.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004633	Chn2	ENSMUST00000046856	ENSMUSP00000035908	TRANSLATION	protein_coding	-	CCDS51778.1	1	468	8	9.66	14	277.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004633	Chn2	ENSMUST00000138930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004633	Chn2	ENSMUST00000204410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004633	Chn2	ENSMUST00000146114	ENSMUSP00000114476	TRANSLATION	protein_coding	-	CCDS80535.1	1	282	8	6.382	0.5	232	0	-4,0	-	-	9.282	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000133315	ENSMUSP00000145072	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	1.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000204921	ENSMUSP00000145231	TRANSLATION	protein_coding	-	-	5	286	8	5.25	1.2	136.4	0	-4,-5	-	-	6.06	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000127323	ENSMUSP00000118990	TRANSLATION	protein_coding	stop	-	3	103	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000114403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004633	Chn2	ENSMUST00000204115	ENSMUSP00000145507	TRANSLATION	protein_coding	-	-	5	260	8	4.5	1.2	139.2	0	-4,-5	-	-	6.06	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000114402	ENSMUSP00000110044	TRANSLATION	protein_coding	stop	-	1	225	8	5.25	0	188.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000203091	ENSMUSP00000145008	TRANSLATION	protein_coding	-	-	5	197	8	3.25	1.2	96.1	0	-4,-5	-	-	6.06	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000067741	ENSMUSP00000066078	TRANSLATION	protein_coding	-	CCDS20154.1	1	332	8	6.25	2.9	232	0	-4,-5	-	-	9.866	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000114401	ENSMUSP00000110043	TRANSLATION	protein_coding	-	CCDS80536.1	1	277	8	6.25	2.9	232	0	-4,-2	-	-	9.866	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000203941	ENSMUSP00000145314	TRANSLATION	protein_coding	-	-	5	228	3	4.25	1.2	107	0	-4,-5	-	-	2.31	MINOR
ENSMUSG00000004633	Chn2	ENSMUST00000204746	ENSMUSP00000144983	TRANSLATION	protein_coding	-	-	5	274	3	5.25	1.2	184.5	0	-4,-5	-	-	2.742	MINOR
ENSMUSG00000025609	Mkln1	ENSMUST00000150949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025609	Mkln1	ENSMUST00000137621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000026699	ENSMUSP00000026699	TRANSLATION	protein_coding	-	CCDS19982.1	1	735	0	7.215	8.8	400.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025609	Mkln1	ENSMUST00000154954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025609	Mkln1	ENSMUST00000130108	ENSMUSP00000123048	TRANSLATION	protein_coding	start	-	5	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025609	Mkln1	ENSMUST00000200915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000141045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000134315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000149859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000134544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000202577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025609	Mkln1	ENSMUST00000147614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025609	Mkln1	ENSMUST00000133182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089694	Nat8f7	ENSMUST00000179613	ENSMUSP00000136338	TRANSLATION	protein_coding	-	CCDS57434.1	-	227	22	0.16	0.5	49.5	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000089694	Nat8f7	ENSMUST00000160534	ENSMUSP00000123947	TRANSLATION	protein_coding	-	CCDS57434.1	5	227	22	0.16	0.5	49.5	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000093906	Igkv9-129	ENSMUST00000103308	ENSMUSP00000100109	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	45.6	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093906	Igkv9-129	ENSMUST00000200578	ENSMUSP00000142382	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	45.6	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000029999	Tgfa	ENSMUST00000193710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029999	Tgfa	ENSMUST00000032066	ENSMUSP00000032066	TRANSLATION	protein_coding	-	CCDS51832.1	1	159	4	1.8	8.6	0	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000029999	Tgfa	ENSMUST00000194449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029999	Tgfa	ENSMUST00000192058	ENSMUSP00000141395	TRANSLATION	protein_coding	stop	-	3	98	2	1	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030162	Olr1	ENSMUST00000162815	ENSMUSP00000124660	TRANSLATION	protein_coding	stop	-	3	97	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030162	Olr1	ENSMUST00000032265	ENSMUSP00000032265	TRANSLATION	protein_coding	-	CCDS20588.1	1	363	0	4.73	0.5	57.3	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030162	Olr1	ENSMUST00000183258	ENSMUSP00000138228	TRANSLATION	protein_coding	-	CCDS80619.1	1	155	0	3.8	0.5	57.3	0	-4,-5	-	-	10.14	MINOR
ENSMUSG00000030162	Olr1	ENSMUST00000182784	ENSMUSP00000138588	TRANSLATION	protein_coding	-	CCDS80620.1	1	189	0	4	0.5	57.3	1	-4,-6	-	-	10.542	MINOR
ENSMUSG00000030162	Olr1	ENSMUST00000203564	ENSMUSP00000144833	TRANSLATION	protein_coding	start/stop	-	5	140	0	3.45	0	53	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019124	Scrn1	ENSMUST00000019268	ENSMUSP00000019268	TRANSLATION	protein_coding	-	CCDS20156.1	1	414	0	0	7.6	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000019124	Scrn1	ENSMUST00000203800	ENSMUSP00000145469	TRANSLATION	protein_coding	start	-	3	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019124	Scrn1	ENSMUST00000129744	ENSMUSP00000118255	TRANSLATION	protein_coding	stop	-	5	76	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019124	Scrn1	ENSMUST00000140235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019124	Scrn1	ENSMUST00000124325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019124	Scrn1	ENSMUST00000205108	ENSMUSP00000145208	TRANSLATION	protein_coding	start	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029638	Glcci1	ENSMUST00000162383	ENSMUSP00000125260	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	118.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029638	Glcci1	ENSMUST00000064285	ENSMUSP00000069444	TRANSLATION	protein_coding	-	CCDS19910.2	1	538	0	0	0.5	429.6	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000029638	Glcci1	ENSMUST00000161217	ENSMUSP00000124167	TRANSLATION	protein_coding	-	CCDS71725.1	1	350	0	0	0.5	365.2	0	-4,-5	-	-	2.136	MINOR
ENSMUSG00000029638	Glcci1	ENSMUST00000162567	ENSMUSP00000125079	TRANSLATION	protein_coding	-	CCDS71724.1	1	351	0	0	0.5	359.2	0	-4,-5	-	-	1.776	MINOR
ENSMUSG00000029638	Glcci1	ENSMUST00000162206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029638	Glcci1	ENSMUST00000161494	ENSMUSP00000124595	TRANSLATION	protein_coding	-	-	2	237	0	0	0	285.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000000628	Hk2	ENSMUST00000168725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000628	Hk2	ENSMUST00000000642	ENSMUSP00000000642	TRANSLATION	protein_coding	-	CCDS20263.1	1	917	58	18.08	12.1	1103.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000000628	Hk2	ENSMUST00000169270	ENSMUSP00000128572	TRANSLATION	protein_coding	stop	-	3	43	0	1	0	34.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000628	Hk2	ENSMUST00000170833	ENSMUSP00000125986	TRANSLATION	protein_coding	-	-	5	889	58	17	2.4	1098.1	0	-4,-6	-	-	16.014	MINOR
ENSMUSG00000038213	Tapbpl	ENSMUST00000043422	ENSMUSP00000047105	TRANSLATION	protein_coding	-	CCDS20547.1	1	451	0	1.2	0.5	77.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051855	Mest	ENSMUST00000130751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051855	Mest	ENSMUST00000141130	ENSMUSP00000145027	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000051855	Mest	ENSMUST00000115127	ENSMUSP00000110780	TRANSLATION	protein_coding	stop	-	3	112	0	0.95	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000051855	Mest	ENSMUST00000131465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051855	Mest	ENSMUST00000149496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051855	Mest	ENSMUST00000157040	ENSMUSP00000119038	TRANSLATION	protein_coding	-	CCDS80513.1	1	326	4	5.54	10.6	54.8	2	0,-4	-	-	19	ALTERNATIVE:1
ENSMUSG00000051855	Mest	ENSMUST00000137521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051855	Mest	ENSMUST00000147400	ENSMUSP00000120408	TRANSLATION	protein_coding	stop	-	3	145	2	2.58	0	49.8	2	0,-4	-	-	-1	MINOR
ENSMUSG00000051855	Mest	ENSMUST00000124665	ENSMUSP00000117713	TRANSLATION	protein_coding	-	CCDS80512.1	1	342	4	5.54	0.5	54.8	2	-4,-7	-	-	16	MINOR
ENSMUSG00000051855	Mest	ENSMUST00000163949	ENSMUSP00000129639	TRANSLATION	protein_coding	-	CCDS19979.1	1	335	4	5.54	7.5	54.8	2	-2,-6	-	-	18.031	PRINCIPAL:3
ENSMUSG00000051855	Mest	ENSMUST00000151777	ENSMUSP00000115541	TRANSLATION	protein_coding	stop	-	3	133	0	0.95	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000030254	Rad18	ENSMUST00000142079	ENSMUSP00000117582	TRANSLATION	protein_coding	start/stop	-	5	241	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030254	Rad18	ENSMUST00000077088	ENSMUSP00000076341	TRANSLATION	protein_coding	-	CCDS39589.1	1	509	13	3.75	0.5	80.3	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030254	Rad18	ENSMUST00000113182	ENSMUSP00000108807	TRANSLATION	protein_coding	-	-	5	449	13	3.75	0	80.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030254	Rad18	ENSMUST00000132590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030254	Rad18	ENSMUST00000135092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030254	Rad18	ENSMUST00000068487	ENSMUSP00000070619	TRANSLATION	protein_coding	-	CCDS51870.1	1	556	13	3.75	0.5	80.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030254	Rad18	ENSMUST00000156063	ENSMUSP00000138558	TRANSLATION	nonsense_mediated_decay	-	-	5	309	13	3.75	0	80.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030254	Rad18	ENSMUST00000113180	ENSMUSP00000108805	TRANSLATION	protein_coding	-	-	5	428	13	3.75	0	80.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000064080	Fbln2	ENSMUST00000137029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064080	Fbln2	ENSMUST00000041544	ENSMUSP00000048334	TRANSLATION	protein_coding	-	CCDS39566.1	1	1221	40	5.52	1.5	373.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000064080	Fbln2	ENSMUST00000113498	ENSMUSP00000109126	TRANSLATION	protein_coding	-	CCDS39567.1	1	1174	36	5.52	1.5	339.3	0	4,-1	-	-	13.284	MINOR
ENSMUSG00000064080	Fbln2	ENSMUST00000134974	ENSMUSP00000116302	TRANSLATION	protein_coding	stop	-	2	76	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000064080	Fbln2	ENSMUST00000134286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064080	Fbln2	ENSMUST00000147371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064080	Fbln2	ENSMUST00000203406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064080	Fbln2	ENSMUST00000132021	ENSMUSP00000116456	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000064080	Fbln2	ENSMUST00000153364	ENSMUSP00000120101	TRANSLATION	protein_coding	stop	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030043	Tacr1	ENSMUST00000205041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030043	Tacr1	ENSMUST00000032122	ENSMUSP00000032122	TRANSLATION	protein_coding	-	CCDS20262.1	1	407	0	5	7.6	194.5	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030043	Tacr1	ENSMUST00000203775	ENSMUSP00000145217	TRANSLATION	protein_coding	-	CCDS20262.1	1	407	0	5	7.6	194.5	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029563	Foxp2	ENSMUST00000115477	ENSMUSP00000111137	TRANSLATION	protein_coding	-	CCDS19918.1	1	714	4	5.25	3.7	216	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000029563	Foxp2	ENSMUST00000031545	ENSMUSP00000031545	TRANSLATION	protein_coding	-	CCDS19918.1	1	714	4	5.25	3.7	216	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000029563	Foxp2	ENSMUST00000115472	ENSMUSP00000111132	TRANSLATION	protein_coding	-	CCDS71726.1	1	693	4	5.25	2.5	216	0	-4,-5	-	-	16.556	ALTERNATIVE:2
ENSMUSG00000029563	Foxp2	ENSMUST00000140557	ENSMUSP00000121503	TRANSLATION	protein_coding	stop	-	5	260	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000203227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029563	Foxp2	ENSMUST00000151301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029563	Foxp2	ENSMUST00000115470	ENSMUSP00000111130	TRANSLATION	protein_coding	-	-	1	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000204869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029563	Foxp2	ENSMUST00000151060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029563	Foxp2	ENSMUST00000128567	ENSMUSP00000123067	TRANSLATION	protein_coding	stop	-	5	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000154448	ENSMUSP00000116017	TRANSLATION	protein_coding	stop	-	2	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000115474	ENSMUSP00000111134	TRANSLATION	protein_coding	-	-	5	739	4	5.25	0	216	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000029563	Foxp2	ENSMUST00000159788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029563	Foxp2	ENSMUST00000152563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029563	Foxp2	ENSMUST00000131414	ENSMUSP00000123007	TRANSLATION	protein_coding	-	-	5	456	4	2.2	0	121.4	0	-4,-5	-	-	4.324	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000115475	ENSMUSP00000111135	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000115469	ENSMUSP00000111129	TRANSLATION	protein_coding	-	-	5	430	4	2.2	0	121.4	0	-4,-5	-	-	4.324	MINOR
ENSMUSG00000029563	Foxp2	ENSMUST00000138273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029563	Foxp2	ENSMUST00000156883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029563	Foxp2	ENSMUST00000137628	ENSMUSP00000116650	TRANSLATION	protein_coding	stop	-	3	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000115160	ENSMUSP00000110813	TRANSLATION	protein_coding	-	CCDS19972.1	1	561	0	0	9.5	530.5	4	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000029782	Tmem209	ENSMUST00000202269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029782	Tmem209	ENSMUST00000115157	ENSMUSP00000110810	TRANSLATION	protein_coding	-	CCDS80511.1	1	560	0	0	9.5	530.5	4	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000029782	Tmem209	ENSMUST00000138823	ENSMUSP00000138292	TRANSLATION	nonsense_mediated_decay	-	-	5	561	0	0	9.5	530.5	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000148638	ENSMUSP00000115567	TRANSLATION	protein_coding	stop	-	2	140	0	0	0	39.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000064330	ENSMUSP00000067667	TRANSLATION	protein_coding	-	-	1	438	0	0	0	308.7	4	-4,-7	-	-	0	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000151187	ENSMUSP00000138232	TRANSLATION	nonsense_mediated_decay	-	-	1	403	0	0	0.5	423	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000154547	ENSMUSP00000145248	TRANSLATION	protein_coding	stop	-	2	66	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000102991	ENSMUSP00000100056	TRANSLATION	protein_coding	-	-	5	519	0	0	2.4	362	4	-4,-7	-	-	0.495	MINOR
ENSMUSG00000029782	Tmem209	ENSMUST00000150480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079495	Nat8f6	ENSMUST00000174143	ENSMUSP00000133846	TRANSLATION	protein_coding	-	CCDS51830.1	3	226	22	0.16	1.5	50	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000079495	Nat8f6	ENSMUST00000087656	ENSMUSP00000084938	TRANSLATION	protein_coding	-	CCDS51830.1	1	226	22	0.16	1.5	50	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030314	Atg7	ENSMUST00000182510	ENSMUSP00000138300	TRANSLATION	protein_coding	stop	-	5	172	0	4.304	0	205.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000169310	ENSMUSP00000133215	TRANSLATION	protein_coding	-	CCDS59697.1	1	741	20	12.132	0.5	533.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000030314	Atg7	ENSMUST00000182428	ENSMUSP00000138779	TRANSLATION	protein_coding	-	-	5	671	18	11.382	0	520.4	0	-4,-5	-	-	14.364	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000204593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030314	Atg7	ENSMUST00000182934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030314	Atg7	ENSMUST00000183165	ENSMUSP00000138600	TRANSLATION	protein_coding	-	-	5	618	20	10.532	0	465.5	0	-4,-5	-	-	10.704	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000032457	ENSMUSP00000032457	TRANSLATION	protein_coding	-	CCDS39598.1	1	698	20	12.132	1.5	533.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030314	Atg7	ENSMUST00000182034	ENSMUSP00000138358	TRANSLATION	protein_coding	stop	-	3	232	0	4.784	0	221.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000182098	ENSMUSP00000138253	TRANSLATION	protein_coding	stop	-	3	41	0	0.8	0	45.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000203130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030314	Atg7	ENSMUST00000182035	ENSMUSP00000138731	TRANSLATION	protein_coding	stop	-	5	222	0	4.724	0	223.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000182860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030314	Atg7	ENSMUST00000182169	ENSMUSP00000138404	TRANSLATION	protein_coding	stop	-	5	110	0	1.704	0	90.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000182771	ENSMUSP00000138374	TRANSLATION	protein_coding	stop	-	2	67	0	1.064	0	71.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030314	Atg7	ENSMUST00000183127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030314	Atg7	ENSMUST00000182793	ENSMUSP00000138137	TRANSLATION	protein_coding	-	CCDS39598.1	1	698	20	12.132	1.5	533.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030314	Atg7	ENSMUST00000182902	ENSMUSP00000138651	TRANSLATION	protein_coding	-	CCDS39598.1	2	698	20	12.132	1.5	533.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000029993	Nfu1	ENSMUST00000032060	ENSMUSP00000032060	TRANSLATION	protein_coding	-	CCDS51836.1	1	256	0	4.85	0.5	207.1	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000029993	Nfu1	ENSMUST00000203512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029993	Nfu1	ENSMUST00000204103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029993	Nfu1	ENSMUST00000127819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029993	Nfu1	ENSMUST00000120240	ENSMUSP00000113637	TRANSLATION	protein_coding	-	CCDS51836.1	5	256	0	4.85	0.5	207.1	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000029993	Nfu1	ENSMUST00000140343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029993	Nfu1	ENSMUST00000205018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029993	Nfu1	ENSMUST00000144776	ENSMUSP00000121746	TRANSLATION	protein_coding	stop	-	3	255	0	2.75	0	104.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000029993	Nfu1	ENSMUST00000117583	ENSMUSP00000113332	TRANSLATION	protein_coding	-	CCDS85088.1	1	255	0	4.85	0.5	207.1	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000049112	Oxtr	ENSMUST00000053306	ENSMUSP00000051132	TRANSLATION	protein_coding	-	CCDS39588.1	1	388	0	1.284	0.5	154	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049112	Oxtr	ENSMUST00000204027	ENSMUSP00000145300	TRANSLATION	protein_coding	-	-	1	75	0	0.6	0	0	0	-4,-7	-	-	2.802	MINOR
ENSMUSG00000071356	Reg3b	ENSMUST00000204760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071356	Reg3b	ENSMUST00000096904	ENSMUSP00000094667	TRANSLATION	protein_coding	-	CCDS20253.1	1	175	3	3.83	1.7	85.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000071356	Reg3b	ENSMUST00000203266	ENSMUSP00000145528	TRANSLATION	protein_coding	stop	-	3	143	2	2.75	0	55	0	4,-1	-	-	-1	MINOR
ENSMUSG00000071356	Reg3b	ENSMUST00000204873	ENSMUSP00000145280	TRANSLATION	protein_coding	stop	-	3	140	2	2.75	0	55	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030104	Edem1	ENSMUST00000203302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030104	Edem1	ENSMUST00000203469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030104	Edem1	ENSMUST00000204804	ENSMUSP00000144901	TRANSLATION	nonsense_mediated_decay	-	-	1	539	0	5	0	324.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000030104	Edem1	ENSMUST00000204524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030104	Edem1	ENSMUST00000089162	ENSMUSP00000086565	TRANSLATION	protein_coding	-	CCDS20402.1	1	652	0	6.02	1.5	404.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000060412	Tas2r124	ENSMUST00000076150	ENSMUSP00000075509	TRANSLATION	protein_coding	-	CCDS20620.1	-	309	0	0	1.5	302.9	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000067338	Tuba3b	ENSMUST00000087445	ENSMUSP00000084713	TRANSLATION	protein_coding	-	CCDS39707.1	1	450	24	4	17.5	400.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000055003	Lrtm2	ENSMUST00000068351	ENSMUSP00000063882	TRANSLATION	protein_coding	-	CCDS20472.1	2	370	0	1.25	7.6	82.8	1	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000055003	Lrtm2	ENSMUST00000112756	ENSMUSP00000108376	TRANSLATION	protein_coding	-	CCDS20472.1	1	370	0	1.25	7.6	82.8	1	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000055003	Lrtm2	ENSMUST00000124192	ENSMUSP00000115884	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055003	Lrtm2	ENSMUST00000168793	ENSMUSP00000126661	TRANSLATION	protein_coding	-	CCDS20472.1	5	370	0	1.25	7.6	82.8	1	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000008845	Cd163	ENSMUST00000203210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008845	Cd163	ENSMUST00000112541	ENSMUSP00000108160	TRANSLATION	protein_coding	-	CCDS51905.1	1	1159	14	3.86	0.5	856.5	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000008845	Cd163	ENSMUST00000032234	ENSMUSP00000032234	TRANSLATION	protein_coding	-	CCDS20516.1	1	1121	14	3.86	0.5	856.5	0	-3,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000059654	Reg1	ENSMUST00000079926	ENSMUSP00000078847	TRANSLATION	protein_coding	-	CCDS20257.1	1	165	7	4.05	1.5	76.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000059654	Reg1	ENSMUST00000204687	ENSMUSP00000145161	TRANSLATION	protein_coding	-	CCDS20257.1	5	165	7	4.05	1.5	76.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000059654	Reg1	ENSMUST00000204601	ENSMUSP00000144840	TRANSLATION	protein_coding	-	CCDS20257.1	5	165	7	4.05	1.5	76.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029780	Nt5c3	ENSMUST00000134577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029780	Nt5c3	ENSMUST00000152447	ENSMUSP00000138606	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.1	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000029780	Nt5c3	ENSMUST00000031793	ENSMUSP00000031793	TRANSLATION	protein_coding	-	CCDS20171.1	1	331	9	7.6	13.5	386.5	1	0,-4	-	-	21.202	PRINCIPAL:3
ENSMUSG00000029780	Nt5c3	ENSMUST00000101367	ENSMUSP00000098918	TRANSLATION	protein_coding	-	CCDS57424.1	1	297	9	8	8.8	386.5	0	-4,-6	-	-	20.496	ALTERNATIVE:1
ENSMUSG00000029780	Nt5c3	ENSMUST00000138647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029780	Nt5c3	ENSMUST00000205087	ENSMUSP00000145410	TRANSLATION	protein_coding	start/stop	-	3	142	6	3.85	0	167.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029780	Nt5c3	ENSMUST00000126137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029780	Nt5c3	ENSMUST00000135558	ENSMUSP00000145230	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0.1	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000029780	Nt5c3	ENSMUST00000127725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029763	Exoc4	ENSMUST00000156207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029763	Exoc4	ENSMUST00000137043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029763	Exoc4	ENSMUST00000152835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029763	Exoc4	ENSMUST00000115080	ENSMUSP00000110732	TRANSLATION	protein_coding	-	-	1	506	0	0	1.2	0	0	-4,-5	-	-	0.078	MINOR
ENSMUSG00000029763	Exoc4	ENSMUST00000139132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029763	Exoc4	ENSMUST00000090381	ENSMUSP00000087859	TRANSLATION	protein_coding	-	CCDS85028.1	1	522	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029763	Exoc4	ENSMUST00000143190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029763	Exoc4	ENSMUST00000052266	ENSMUSP00000051965	TRANSLATION	protein_coding	-	CCDS19987.1	1	975	0	0	8.8	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000029763	Exoc4	ENSMUST00000134653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029763	Exoc4	ENSMUST00000132842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076488	Trbj1-6	ENSMUST00000103289	ENSMUSP00000141680	TRANSLATION	TR_J_gene	start/stop	-	-	18	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000042717	Ppp1r3a	ENSMUST00000045096	ENSMUSP00000049054	TRANSLATION	protein_coding	-	CCDS19917.1	1	1089	0	1	0.5	102.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029679	Hyal6	ENSMUST00000031690	ENSMUSP00000031690	TRANSLATION	protein_coding	-	CCDS51728.1	1	494	0	2.4	0.5	443.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038022	Mindy4	ENSMUST00000203225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038022	Mindy4	ENSMUST00000053094	ENSMUSP00000061221	TRANSLATION	protein_coding	-	CCDS51782.1	1	744	0	0	0.5	467.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038022	Mindy4	ENSMUST00000204842	ENSMUSP00000145151	TRANSLATION	protein_coding	-	CCDS85054.1	1	600	0	0	0.5	136.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032625	Thsd7a	ENSMUST00000122369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032625	Thsd7a	ENSMUST00000135450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032625	Thsd7a	ENSMUST00000119443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032625	Thsd7a	ENSMUST00000172356	ENSMUSP00000131662	TRANSLATION	protein_coding	-	-	5	1646	24	3.88	1.5	260.4	1	2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000032625	Thsd7a	ENSMUST00000137836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032625	Thsd7a	ENSMUST00000119581	ENSMUSP00000113681	TRANSLATION	protein_coding	-	CCDS51721.1	5	1646	24	3.88	1.5	260.4	1	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000061653	Vmn1r46	ENSMUST00000226715	ENSMUSP00000154054	TRANSLATION	protein_coding	-	CCDS20348.1	-	309	0	0	1.5	430.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000061653	Vmn1r46	ENSMUST00000228401	ENSMUSP00000154175	TRANSLATION	protein_coding	-	CCDS20348.1	-	309	0	0	1.5	430.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000061653	Vmn1r46	ENSMUST00000205088	ENSMUSP00000144888	TRANSLATION	protein_coding	-	CCDS20348.1	2	309	0	0	1.5	430.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000061653	Vmn1r46	ENSMUST00000228231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061653	Vmn1r46	ENSMUST00000075797	ENSMUSP00000075197	TRANSLATION	protein_coding	-	CCDS20348.1	-	309	0	0	1.5	430.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029761	Cald1	ENSMUST00000079391	ENSMUSP00000078362	TRANSLATION	protein_coding	-	-	5	534	0	0	6.3	601.9	0	-4,-5	-	-	7.976	PRINCIPAL:1
ENSMUSG00000029761	Cald1	ENSMUST00000126181	ENSMUSP00000121911	TRANSLATION	protein_coding	start/stop	-	5	137	0	0	0	69.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000201956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000136907	ENSMUSP00000121213	TRANSLATION	protein_coding	start/stop	-	1	354	0	0	0	53.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000115021	ENSMUSP00000110673	TRANSLATION	protein_coding	-	CCDS39456.1	1	530	0	0	1.5	602.3	0	-4,-2	-	-	6.188	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000146685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000149009	ENSMUSP00000138368	TRANSLATION	nonsense_mediated_decay	-	-	5	534	0	0	0	562.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000142512	ENSMUSP00000122926	TRANSLATION	protein_coding	stop	-	3	253	0	0	0	135.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000127055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000142716	ENSMUSP00000116247	TRANSLATION	protein_coding	start/stop	-	5	274	0	0	0	199.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000031775	ENSMUSP00000031775	TRANSLATION	protein_coding	-	-	5	554	0	0	2.4	598	0	-4,-2	-	-	6.27	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000201024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000123823	ENSMUSP00000117064	TRANSLATION	protein_coding	start/stop	-	3	211	0	0	0	98.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000115026	ENSMUSP00000110678	TRANSLATION	protein_coding	-	CCDS85029.1	5	536	0	0	2.7	602.3	0	-4,-5	-	-	6.642	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000115027	ENSMUSP00000110679	TRANSLATION	protein_coding	-	-	5	768	0	0	0.5	479.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029761	Cald1	ENSMUST00000155714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000132331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029761	Cald1	ENSMUST00000154182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000126996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000032427	ENSMUSP00000032427	TRANSLATION	protein_coding	-	CCDS39710.1	1	732	0	0	1.5	959.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040250	Ints13	ENSMUST00000203545	ENSMUSP00000145229	TRANSLATION	protein_coding	start	-	5	327	0	0	0	364.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040250	Ints13	ENSMUST00000139546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000139979	ENSMUSP00000122279	TRANSLATION	protein_coding	start	-	2	230	0	0	0	196.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040250	Ints13	ENSMUST00000135277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040250	Ints13	ENSMUST00000132963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000204234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000152994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040250	Ints13	ENSMUST00000131662	ENSMUSP00000118000	TRANSLATION	protein_coding	start/stop	-	5	395	0	0	0	570	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040250	Ints13	ENSMUST00000205078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094113	5430401F13Rik	ENSMUST00000161385	ENSMUSP00000125129	TRANSLATION	protein_coding	-	CCDS57458.1	1	175	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000094113	5430401F13Rik	ENSMUST00000075020	ENSMUSP00000074539	TRANSLATION	protein_coding	-	-	5	175	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000029777	Gars	ENSMUST00000205258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029777	Gars	ENSMUST00000203334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029777	Gars	ENSMUST00000003572	ENSMUSP00000003572	TRANSLATION	protein_coding	-	CCDS39492.1	1	729	17	16.1	1.5	156.6	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000038301	Snx10	ENSMUST00000149024	ENSMUSP00000138139	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	1.146	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038301	Snx10	ENSMUST00000140560	ENSMUSP00000122639	TRANSLATION	protein_coding	stop	-	5	96	0	2.91	0	58.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038301	Snx10	ENSMUST00000114439	ENSMUSP00000110082	TRANSLATION	protein_coding	-	CCDS20136.1	1	201	0	4.99	7.5	87.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038301	Snx10	ENSMUST00000155724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038301	Snx10	ENSMUST00000137212	ENSMUSP00000117914	TRANSLATION	protein_coding	stop	-	3	177	0	4.24	0	87.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038301	Snx10	ENSMUST00000049152	ENSMUSP00000044165	TRANSLATION	protein_coding	-	CCDS20136.1	1	201	0	4.99	7.5	87.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038301	Snx10	ENSMUST00000179365	ENSMUSP00000136974	TRANSLATION	protein_coding	-	CCDS20136.1	1	201	0	4.99	7.5	87.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038388	Mpp6	ENSMUST00000036236	ENSMUSP00000039314	TRANSLATION	protein_coding	-	CCDS20128.1	1	539	19	6.478	14.5	354.8	0	-4,-5	-	-	21.802	PRINCIPAL:1
ENSMUSG00000038388	Mpp6	ENSMUST00000204545	ENSMUSP00000144737	TRANSLATION	protein_coding	-	CCDS20128.1	5	539	19	6.478	14.5	354.8	0	-4,-5	-	-	21.802	PRINCIPAL:1
ENSMUSG00000038388	Mpp6	ENSMUST00000167628	ENSMUSP00000129355	TRANSLATION	protein_coding	stop	-	1	315	0	3.298	0	181	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038388	Mpp6	ENSMUST00000167319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038388	Mpp6	ENSMUST00000171601	ENSMUSP00000129004	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	0	0	31.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038388	Mpp6	ENSMUST00000167063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038388	Mpp6	ENSMUST00000203415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038388	Mpp6	ENSMUST00000166318	ENSMUSP00000125880	TRANSLATION	protein_coding	-	CCDS51770.1	1	553	19	6.578	6.3	354.8	0	-4,-5	-	-	19.572	MINOR
ENSMUSG00000038388	Mpp6	ENSMUST00000036225	ENSMUSP00000038772	TRANSLATION	protein_coding	-	CCDS51770.1	1	553	19	6.578	6.3	354.8	0	-4,-5	-	-	19.572	MINOR
ENSMUSG00000038167	Plekhg6	ENSMUST00000042647	ENSMUSP00000037004	TRANSLATION	protein_coding	-	CCDS39642.1	1	787	0	5.62	0.5	122.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073111	Olfr446	ENSMUST00000101461	ENSMUSP00000099005	TRANSLATION	protein_coding	-	CCDS20084.1	-	308	0	0.42	4.1	209.8	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073111	Olfr446	ENSMUST00000215686	ENSMUSP00000151143	TRANSLATION	protein_coding	-	CCDS20084.1	5	308	0	0.42	4.1	209.8	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073111	Olfr446	ENSMUST00000215369	ENSMUSP00000149013	TRANSLATION	protein_coding	-	CCDS20084.1	5	308	0	0.42	4.1	209.8	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073111	Olfr446	ENSMUST00000216199	ENSMUSP00000150255	TRANSLATION	protein_coding	-	CCDS20084.1	5	308	0	0.42	4.1	209.8	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000036463	4930544G11Rik	ENSMUST00000043382	ENSMUSP00000045487	TRANSLATION	protein_coding	-	CCDS51801.1	-	193	25	1	21.5	189.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000039347	Atp6v0e2	ENSMUST00000204277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039347	Atp6v0e2	ENSMUST00000040361	ENSMUSP00000044110	TRANSLATION	protein_coding	-	CCDS20103.1	1	81	0	0	18.3	85	3	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000039347	Atp6v0e2	ENSMUST00000203011	ENSMUSP00000145198	TRANSLATION	protein_coding	-	CCDS85039.1	2	112	0	0	0.5	46.3	3	-1,-5	-	-	3.27	MINOR
ENSMUSG00000076576	Igkv6-32	ENSMUST00000103377	ENSMUSP00000100178	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	61.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000029686	Cul1	ENSMUST00000149531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029686	Cul1	ENSMUST00000126877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029686	Cul1	ENSMUST00000146828	ENSMUSP00000121608	TRANSLATION	protein_coding	stop	-	2	110	0	2.5	0	39.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029686	Cul1	ENSMUST00000143941	ENSMUSP00000144845	TRANSLATION	protein_coding	-	-	1	51	0	1.5	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000029686	Cul1	ENSMUST00000152547	ENSMUSP00000114959	TRANSLATION	protein_coding	stop	-	2	20	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029686	Cul1	ENSMUST00000154201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029686	Cul1	ENSMUST00000146200	ENSMUSP00000122702	TRANSLATION	protein_coding	stop	-	1	699	0	17.58	0	673.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029686	Cul1	ENSMUST00000151934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029686	Cul1	ENSMUST00000031697	ENSMUSP00000031697	TRANSLATION	protein_coding	-	CCDS20095.1	1	776	0	19.83	19.5	769.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000045534	Kcna5	ENSMUST00000060972	ENSMUSP00000055673	TRANSLATION	protein_coding	-	CCDS20554.1	-	602	0	0.8	1.5	268.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030313	Dennd5b	ENSMUST00000145555	ENSMUSP00000127731	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	45.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030313	Dennd5b	ENSMUST00000204583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030313	Dennd5b	ENSMUST00000127727	ENSMUSP00000123568	TRANSLATION	protein_coding	stop	-	2	146	0	0	0	58.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030313	Dennd5b	ENSMUST00000150436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030313	Dennd5b	ENSMUST00000129539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030313	Dennd5b	ENSMUST00000204030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030313	Dennd5b	ENSMUST00000111557	ENSMUSP00000107182	TRANSLATION	protein_coding	-	CCDS20714.2	5	1274	0	9.555	5.3	502.8	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029670	Ing3	ENSMUST00000136200	ENSMUSP00000138656	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0.63	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029670	Ing3	ENSMUST00000031680	ENSMUSP00000031680	TRANSLATION	protein_coding	-	CCDS39434.1	1	421	8	4.18	10.8	108.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029670	Ing3	ENSMUST00000149728	ENSMUSP00000145391	TRANSLATION	protein_coding	stop	-	2	121	0	1.95	0	87.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029670	Ing3	ENSMUST00000141689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029670	Ing3	ENSMUST00000151473	ENSMUSP00000120651	TRANSLATION	protein_coding	stop	-	5	264	0	1.98	0	60.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029670	Ing3	ENSMUST00000152877	ENSMUSP00000138244	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	1.68	4.9	91.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029670	Ing3	ENSMUST00000144534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029670	Ing3	ENSMUST00000115389	ENSMUSP00000111047	TRANSLATION	protein_coding	-	CCDS80491.1	5	410	8	4.18	1.5	108.3	0	-4,-5	-	-	18.153	MINOR
ENSMUSG00000049168	Olfr449	ENSMUST00000204229	ENSMUSP00000145055	TRANSLATION	protein_coding	stop	-	3	130	0	0.42	0	73.8	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000049168	Olfr449	ENSMUST00000050729	ENSMUSP00000059233	TRANSLATION	protein_coding	-	CCDS20081.1	-	311	0	0.84	7.6	176.3	10	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049168	Olfr449	ENSMUST00000204072	ENSMUSP00000145322	TRANSLATION	protein_coding	-	CCDS20081.1	3	311	0	0.84	7.6	176.3	10	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049168	Olfr449	ENSMUST00000214687	ENSMUSP00000148895	TRANSLATION	protein_coding	-	CCDS20081.1	2	311	0	0.84	7.6	176.3	10	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030055	Rab43	ENSMUST00000123216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030055	Rab43	ENSMUST00000032134	ENSMUSP00000032134	TRANSLATION	protein_coding	-	CCDS20330.1	1	156	11	2	0.5	124.7	0	-3,-6	-	-	6.186	MINOR
ENSMUSG00000030055	Rab43	ENSMUST00000125377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030055	Rab43	ENSMUST00000078647	ENSMUSP00000077716	TRANSLATION	protein_coding	-	CCDS20329.1	1	210	21	3	3.9	188.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030055	Rab43	ENSMUST00000204923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030055	Rab43	ENSMUST00000203294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030055	Rab43	ENSMUST00000032135	ENSMUSP00000032135	TRANSLATION	protein_coding	-	-	1	150	16	2.09	0	137.8	0	-4,-5	-	-	9.816	MINOR
ENSMUSG00000029663	Gngt1	ENSMUST00000031673	ENSMUSP00000031673	TRANSLATION	protein_coding	-	CCDS39418.1	1	74	0	2	15.7	71.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029663	Gngt1	ENSMUST00000159369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052337	Immt	ENSMUST00000171057	ENSMUSP00000133017	TRANSLATION	protein_coding	stop	-	3	188	0	0	0	84.5	3	-4,0	-	-	-1	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000205371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052337	Immt	ENSMUST00000206625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052337	Immt	ENSMUST00000166938	ENSMUSP00000128967	TRANSLATION	protein_coding	-	CCDS57428.1	1	679	0	0	2.7	654.3	3	-4,0	-	-	4.024	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000064062	ENSMUSP00000066181	TRANSLATION	protein_coding	-	CCDS39509.1	1	757	0	0	3.9	684.6	3	-4,0	-	-	6.256	PRINCIPAL:3
ENSMUSG00000052337	Immt	ENSMUST00000206330	ENSMUSP00000145642	TRANSLATION	protein_coding	start	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000207015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052337	Immt	ENSMUST00000205628	ENSMUSP00000146205	TRANSLATION	protein_coding	start	-	1	289	0	0	0	324.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000166975	ENSMUSP00000128367	TRANSLATION	protein_coding	-	CCDS57427.1	1	470	0	0	0.5	335.8	3	-4,0	-	-	0	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000207003	ENSMUSP00000145872	TRANSLATION	nonsense_mediated_decay	-	-	5	488	0	0	0	358.4	3	-4,0	-	-	-1	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000114151	ENSMUSP00000109788	TRANSLATION	protein_coding	-	CCDS57426.1	1	709	0	0	1.5	697	3	-4,0	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000052337	Immt	ENSMUST00000101301	ENSMUSP00000098859	TRANSLATION	protein_coding	-	CCDS57425.1	1	746	0	0	3.9	686.8	3	-4,0	-	-	6.388	ALTERNATIVE:2
ENSMUSG00000052337	Immt	ENSMUST00000165331	ENSMUSP00000128834	TRANSLATION	protein_coding	stop	-	1	264	0	0	0	126.1	3	-4,0	-	-	-1	MINOR
ENSMUSG00000052337	Immt	ENSMUST00000167244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062905	Vmn1r32	ENSMUST00000227014	ENSMUSP00000153723	TRANSLATION	protein_coding	-	CCDS20211.1	-	302	0	0	1.5	183.8	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062905	Vmn1r32	ENSMUST00000079584	ENSMUSP00000078536	TRANSLATION	protein_coding	-	CCDS20211.1	1	302	0	0	1.5	183.8	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030056	Isy1	ENSMUST00000089497	ENSMUSP00000086923	TRANSLATION	protein_coding	-	CCDS39548.1	1	285	0	3.38	9.6	333.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030056	Isy1	ENSMUST00000204881	ENSMUSP00000144710	TRANSLATION	nonsense_mediated_decay	-	-	3	150	0	2.98	0	174.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030056	Isy1	ENSMUST00000204421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030056	Isy1	ENSMUST00000204431	ENSMUSP00000145001	TRANSLATION	protein_coding	stop	-	5	95	0	2.23	0	63.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030056	Isy1	ENSMUST00000205070	ENSMUSP00000144956	TRANSLATION	nonsense_mediated_decay	-	-	2	50	0	1.48	0	61.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030056	Isy1	ENSMUST00000204310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030056	Isy1	ENSMUST00000203429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030056	Isy1	ENSMUST00000204892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030142	Clec4e	ENSMUST00000032239	ENSMUSP00000032239	TRANSLATION	protein_coding	-	CCDS20514.1	1	214	14	3.78	1.5	83.5	1	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000030142	Clec4e	ENSMUST00000177367	ENSMUSP00000135081	TRANSLATION	protein_coding	-	-	3	185	14	3.33	0	83.5	1	-4,-7	-	-	17.1	ALTERNATIVE:2
ENSMUSG00000030142	Clec4e	ENSMUST00000176096	ENSMUSP00000135682	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030142	Clec4e	ENSMUST00000175995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030142	Clec4e	ENSMUST00000176443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030142	Clec4e	ENSMUST00000175954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030142	Clec4e	ENSMUST00000176831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051956	Rnf133	ENSMUST00000063548	ENSMUSP00000066906	TRANSLATION	protein_coding	-	CCDS19938.1	1	339	8	0.9	0.5	77.3	0	-2,-5	-	-	15.09	MINOR
ENSMUSG00000051956	Rnf133	ENSMUST00000115354	ENSMUSP00000111011	TRANSLATION	protein_coding	-	-	-	382	8	1.7	1	78.4	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030020	Prickle2	ENSMUST00000113446	ENSMUSP00000109073	TRANSLATION	protein_coding	-	CCDS51854.1	1	845	23	1.36	7.5	230.8	0	-4,-5	-	-	20.955	ALTERNATIVE:1
ENSMUSG00000030020	Prickle2	ENSMUST00000113447	ENSMUSP00000109074	TRANSLATION	protein_coding	-	CCDS51854.1	1	845	23	1.36	7.5	230.8	0	-4,-5	-	-	20.955	ALTERNATIVE:1
ENSMUSG00000030020	Prickle2	ENSMUST00000032093	ENSMUSP00000032093	TRANSLATION	protein_coding	-	CCDS39572.1	1	901	23	1.36	7.6	230.8	0	-4,-1	-	-	21	PRINCIPAL:3
ENSMUSG00000030020	Prickle2	ENSMUST00000113445	ENSMUSP00000109072	TRANSLATION	protein_coding	-	CCDS51854.1	1	845	23	1.36	7.5	230.8	0	-4,-5	-	-	20.955	ALTERNATIVE:1
ENSMUSG00000030002	Dusp11	ENSMUST00000137527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030002	Dusp11	ENSMUST00000139164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030002	Dusp11	ENSMUST00000151394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030002	Dusp11	ENSMUST00000202379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030002	Dusp11	ENSMUST00000032071	ENSMUSP00000032071	TRANSLATION	protein_coding	-	CCDS20306.1	1	321	7	5.23	0.5	59.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030002	Dusp11	ENSMUST00000156821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030002	Dusp11	ENSMUST00000134793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030002	Dusp11	ENSMUST00000201530	ENSMUSP00000144380	TRANSLATION	nonsense_mediated_decay	start	-	5	145	7	3.5	0	33.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068587	Mgam	ENSMUST00000071535	ENSMUSP00000071466	TRANSLATION	protein_coding	-	CCDS51755.1	1	1827	0	42.03	0.5	1307.4	1	-1,-5	-	-	0	MINOR
ENSMUSG00000068587	Mgam	ENSMUST00000201148	ENSMUSP00000143946	TRANSLATION	protein_coding	-	-	1	1827	0	42.03	0.5	1307.4	1	-1,-5	-	-	0	MINOR
ENSMUSG00000068587	Mgam	ENSMUST00000202311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068587	Mgam	ENSMUST00000238599	ENSMUSP00000158794	TRANSLATION	protein_coding	-	-	-	3616	0	57.672	0.5	2564.8	1	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068587	Mgam	ENSMUST00000202636	ENSMUSP00000144652	TRANSLATION	protein_coding	stop	-	1	316	0	7.3	0	188.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068587	Mgam	ENSMUST00000202775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068587	Mgam	ENSMUST00000202966	ENSMUSP00000144680	TRANSLATION	protein_coding	start/stop	-	5	986	0	22.08	0	634.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068587	Mgam	ENSMUST00000202779	ENSMUSP00000144627	TRANSLATION	protein_coding	-	-	1	1200	0	25.11	0	841.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000000399	Ndufa9	ENSMUST00000205002	ENSMUSP00000144904	TRANSLATION	protein_coding	-	CCDS20557.1	1	377	27	9.25	1.5	42.5	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000000399	Ndufa9	ENSMUST00000200890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000399	Ndufa9	ENSMUST00000088194	ENSMUSP00000085523	TRANSLATION	protein_coding	-	-	5	373	27	9.25	1	42.5	0	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000076550	Igkv4-63	ENSMUST00000103351	ENSMUSP00000100152	TRANSLATION	IG_V_gene	start/stop	-	-	95	2	1	0	55.4	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076550	Igkv4-63	ENSMUST00000196595	ENSMUSP00000143313	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	55.4	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000084927	Gm5724	ENSMUST00000148411	ENSMUSP00000117177	TRANSLATION	protein_coding	-	-	5	670	0	0	0.5	580.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000076498	Trbc2	ENSMUST00000103299	ENSMUSP00000100100	TRANSLATION	TR_C_gene	start	-	-	173	4	1.53	0	83.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000023140	Reg2	ENSMUST00000023906	ENSMUSP00000023906	TRANSLATION	protein_coding	-	CCDS20256.1	1	173	5	4	0.5	76.2	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000023140	Reg2	ENSMUST00000203657	ENSMUSP00000145184	TRANSLATION	protein_coding	stop	-	3	131	4	2.5	0	46.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000043865	Tas2r118	ENSMUST00000062463	ENSMUSP00000053700	TRANSLATION	protein_coding	-	CCDS19939.1	-	299	0	0	1.5	285.5	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033706	Smyd5	ENSMUST00000156322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033706	Smyd5	ENSMUST00000204428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033706	Smyd5	ENSMUST00000130928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033706	Smyd5	ENSMUST00000152218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033706	Smyd5	ENSMUST00000153749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033706	Smyd5	ENSMUST00000045693	ENSMUSP00000048537	TRANSLATION	protein_coding	-	CCDS51827.1	1	416	13	2.685	9.5	36.9	0	-3,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033706	Smyd5	ENSMUST00000204615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033706	Smyd5	ENSMUST00000134405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000153306	ENSMUSP00000118200	TRANSLATION	protein_coding	stop	-	5	209	4	5.25	0	49.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038429	Usp5	ENSMUST00000146098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000122110	ENSMUSP00000114000	TRANSLATION	protein_coding	-	CCDS85157.1	1	835	4	20.83	9.6	327	0	-4,-5	-	-	18.433	ALTERNATIVE:1
ENSMUSG00000038429	Usp5	ENSMUST00000047510	ENSMUSP00000041299	TRANSLATION	protein_coding	-	CCDS20531.1	1	858	4	20.455	11.6	326.7	0	-4,-5	-	-	18.232	PRINCIPAL:3
ENSMUSG00000038429	Usp5	ENSMUST00000141042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000154189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000131805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000129159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038429	Usp5	ENSMUST00000142058	ENSMUSP00000117439	TRANSLATION	protein_coding	stop	-	3	303	4	8.08	0	62.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033769	Exoc6b	ENSMUST00000204011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033769	Exoc6b	ENSMUST00000162821	ENSMUSP00000124512	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033769	Exoc6b	ENSMUST00000160783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033769	Exoc6b	ENSMUST00000162786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033769	Exoc6b	ENSMUST00000160197	ENSMUSP00000125312	TRANSLATION	protein_coding	-	CCDS51824.1	1	810	0	6.91	6.3	342.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033769	Exoc6b	ENSMUST00000161443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033769	Exoc6b	ENSMUST00000046334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033769	Exoc6b	ENSMUST00000051531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076555	Igkv4-57-1	ENSMUST00000103356	ENSMUSP00000100157	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	60.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000053063	Clec12a	ENSMUST00000147106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053063	Clec12a	ENSMUST00000151671	ENSMUSP00000118315	TRANSLATION	protein_coding	stop	-	5	179	0	1	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000053063	Clec12a	ENSMUST00000133756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053063	Clec12a	ENSMUST00000065289	ENSMUSP00000063627	TRANSLATION	protein_coding	-	CCDS20584.1	1	267	0	1.84	1.5	33.9	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055799	Tcf7l1	ENSMUST00000149446	ENSMUSP00000115060	TRANSLATION	protein_coding	start/stop	-	3	154	0	0	0	125.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055799	Tcf7l1	ENSMUST00000141743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055799	Tcf7l1	ENSMUST00000182651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055799	Tcf7l1	ENSMUST00000114053	ENSMUSP00000109687	TRANSLATION	protein_coding	-	CCDS39517.1	1	599	0	3.15	0.5	369.5	0	-4,-5	-	-	11.97	ALTERNATIVE:2
ENSMUSG00000055799	Tcf7l1	ENSMUST00000069536	ENSMUSP00000069403	TRANSLATION	protein_coding	-	CCDS20245.1	1	585	0	3.15	0.5	370	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000000942	Hoxa4	ENSMUST00000101395	ENSMUSP00000098943	TRANSLATION	protein_coding	-	CCDS20142.1	1	285	0	1	1.5	77.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068335	Dok1	ENSMUST00000204900	ENSMUSP00000145347	TRANSLATION	protein_coding	start	-	3	51	0	1.066	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068335	Dok1	ENSMUST00000149918	ENSMUSP00000145318	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068335	Dok1	ENSMUST00000089651	ENSMUSP00000087079	TRANSLATION	protein_coding	-	CCDS20265.1	1	482	0	4.196	5.1	149.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030217	Art4	ENSMUST00000032341	ENSMUSP00000032341	TRANSLATION	protein_coding	-	CCDS20658.1	1	300	1	0.48	0.5	163.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079293	Clec7a	ENSMUST00000184581	ENSMUSP00000139167	TRANSLATION	protein_coding	-	CCDS85170.1	3	199	6	3	1.7	65.8	2	-4,-5	-	-	17.202	PRINCIPAL:2
ENSMUSG00000079293	Clec7a	ENSMUST00000184861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079293	Clec7a	ENSMUST00000112076	ENSMUSP00000107707	TRANSLATION	protein_coding	-	-	5	244	6	3.4	0	65.8	2	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000079293	Clec7a	ENSMUST00000195589	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000095633	Igkv4-58	ENSMUST00000197448	ENSMUSP00000143579	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	61.5	0	-1,-4	-	-	-1	PRINCIPAL:5
ENSMUSG00000095633	Igkv4-58	ENSMUST00000103355	ENSMUSP00000100156	TRANSLATION	IG_V_gene	start/stop	-	-	97	0	1	0	61.5	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000042079	Hnrnpf	ENSMUST00000177570	ENSMUSP00000136162	TRANSLATION	protein_coding	stop	-	1	232	0	3	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042079	Hnrnpf	ENSMUST00000180020	ENSMUSP00000137632	TRANSLATION	protein_coding	-	CCDS20467.1	1	415	0	4	7.5	159.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042079	Hnrnpf	ENSMUST00000177743	ENSMUSP00000136477	TRANSLATION	protein_coding	stop	-	3	31	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042079	Hnrnpf	ENSMUST00000179478	ENSMUSP00000136436	TRANSLATION	protein_coding	stop	-	2	208	0	3	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042079	Hnrnpf	ENSMUST00000177918	ENSMUSP00000137091	TRANSLATION	protein_coding	stop	-	5	70	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042079	Hnrnpf	ENSMUST00000180341	ENSMUSP00000136700	TRANSLATION	protein_coding	-	CCDS20467.1	-	415	0	4	7.5	159.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042079	Hnrnpf	ENSMUST00000163168	ENSMUSP00000130023	TRANSLATION	protein_coding	-	CCDS20467.1	1	415	0	4	7.5	159.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042079	Hnrnpf	ENSMUST00000035493	ENSMUSP00000045048	TRANSLATION	protein_coding	-	CCDS20467.1	1	415	0	4	7.5	159.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042079	Hnrnpf	ENSMUST00000167182	ENSMUSP00000126817	TRANSLATION	protein_coding	-	CCDS20467.1	3	415	0	4	7.5	159.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042079	Hnrnpf	ENSMUST00000179224	ENSMUSP00000136751	TRANSLATION	protein_coding	stop	-	2	14	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042042	Csgalnact2	ENSMUST00000125531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042042	Csgalnact2	ENSMUST00000136265	ENSMUSP00000116371	TRANSLATION	protein_coding	stop	-	2	223	4	0	0	196	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042042	Csgalnact2	ENSMUST00000049344	ENSMUSP00000039819	TRANSLATION	protein_coding	-	CCDS20469.1	1	542	5	0	8.8	274.3	0	0,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000091625	Lsm5	ENSMUST00000177144	ENSMUSP00000135337	TRANSLATION	nonsense_mediated_decay	start	-	3	42	0	1.5	0	27.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091625	Lsm5	ENSMUST00000203958	ENSMUSP00000144811	TRANSLATION	protein_coding	-	-	3	59	0	2.16	0	27.2	0	-4,-6	-	-	6.258	MINOR
ENSMUSG00000091625	Lsm5	ENSMUST00000175865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091625	Lsm5	ENSMUST00000170382	ENSMUSP00000126565	TRANSLATION	protein_coding	-	CCDS51788.1	1	91	0	3.16	19.5	72.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000091625	Lsm5	ENSMUST00000176595	ENSMUSP00000145140	TRANSLATION	protein_coding	-	-	5	59	0	1.5	0	28.1	0	-4,-5	-	-	5.01	MINOR
ENSMUSG00000048668	Rhno1	ENSMUST00000112152	ENSMUSP00000107779	TRANSLATION	protein_coding	-	CCDS85164.1	1	235	0	0	1.5	309.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048668	Rhno1	ENSMUST00000155573	ENSMUSP00000114836	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	141.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048668	Rhno1	ENSMUST00000223237	ENSMUSP00000152251	TRANSLATION	protein_coding	-	CCDS85164.1	2	235	0	0	1.5	309.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048668	Rhno1	ENSMUST00000112151	ENSMUSP00000107778	TRANSLATION	protein_coding	-	CCDS85164.1	1	235	0	0	1.5	309.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048668	Rhno1	ENSMUST00000132604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048668	Rhno1	ENSMUST00000057421	ENSMUSP00000054573	TRANSLATION	protein_coding	-	CCDS85164.1	1	235	0	0	1.5	309.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048668	Rhno1	ENSMUST00000203719	ENSMUSP00000145447	TRANSLATION	protein_coding	stop	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072704	Smim10l1	ENSMUST00000100864	ENSMUSP00000098428	TRANSLATION	protein_coding	-	CCDS51934.1	-	67	0	0	2.9	129.9	0	-1,-4	-	-	6	PRINCIPAL:3
ENSMUSG00000072704	Smim10l1	ENSMUST00000186945	ENSMUSP00000139534	TRANSLATION	protein_coding	start	-	2	49	0	0	0	89.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072704	Smim10l1	ENSMUST00000191462	ENSMUSP00000139452	TRANSLATION	protein_coding	-	CCDS80626.1	3	89	0	0	1.5	122	0	-2,-5	-	-	5.526	ALTERNATIVE:2
ENSMUSG00000072704	Smim10l1	ENSMUST00000187237	ENSMUSP00000139832	TRANSLATION	nonsense_mediated_decay	-	-	2	75	0	0	0.5	122	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000033024	Klra9	ENSMUST00000071554	ENSMUSP00000071485	TRANSLATION	protein_coding	-	CCDS39667.1	1	266	3	4	0.5	235.7	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000033024	Klra9	ENSMUST00000112032	ENSMUSP00000107663	TRANSLATION	protein_coding	-	CCDS39667.1	1	266	3	4	0.5	235.7	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096715	Igkv3-4	ENSMUST00000103401	ENSMUSP00000100202	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	71.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030001	Figla	ENSMUST00000032070	ENSMUSP00000032070	TRANSLATION	protein_coding	-	CCDS20307.1	1	194	0	1	1.5	57.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030001	Figla	ENSMUST00000201361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030265	Kras	ENSMUST00000203147	ENSMUSP00000145294	TRANSLATION	protein_coding	-	-	5	75	15	2	0	38.5	0	-4,-5	-	-	3.33	MINOR
ENSMUSG00000030265	Kras	ENSMUST00000123972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030265	Kras	ENSMUST00000156486	ENSMUSP00000119414	TRANSLATION	nonsense_mediated_decay	-	-	5	40	11	1	0	38.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030265	Kras	ENSMUST00000149314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030265	Kras	ENSMUST00000111710	ENSMUSP00000107339	TRANSLATION	protein_coding	-	-	5	189	22	4	17.5	197.8	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000030265	Kras	ENSMUST00000032399	ENSMUSP00000032399	TRANSLATION	protein_coding	-	CCDS20693.1	1	188	22	4	17.3	197.6	0	-4,-5	-	-	21.94	PRINCIPAL:2
ENSMUSG00000030265	Kras	ENSMUST00000155145	ENSMUSP00000118251	TRANSLATION	protein_coding	stop	-	3	34	10	1	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029826	Zc3hav1	ENSMUST00000114898	ENSMUSP00000110548	TRANSLATION	protein_coding	-	-	1	673	16	3	0	44.7	0	-4,-5	-	-	8.52	MINOR
ENSMUSG00000029826	Zc3hav1	ENSMUST00000031850	ENSMUSP00000031850	TRANSLATION	protein_coding	-	CCDS20012.1	1	789	16	3	0.5	44.7	0	-4,-5	-	-	8.52	MINOR
ENSMUSG00000029826	Zc3hav1	ENSMUST00000143702	ENSMUSP00000144312	TRANSLATION	protein_coding	-	CCDS80522.1	1	946	16	5.2	0.5	74.1	0	-4,-5	-	-	14.286	MINOR
ENSMUSG00000029826	Zc3hav1	ENSMUST00000114900	ENSMUSP00000110550	TRANSLATION	protein_coding	-	CCDS85033.1	5	996	16	6.2	0.5	102.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073209	Klf14	ENSMUST00000101589	ENSMUSP00000099122	TRANSLATION	protein_coding	-	CCDS51744.1	-	325	12	0.4	1.5	67	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000061758	Akr1b10	ENSMUST00000144384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061758	Akr1b10	ENSMUST00000139156	ENSMUSP00000138639	TRANSLATION	nonsense_mediated_decay	-	-	1	145	9	3.41	0	81	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061758	Akr1b10	ENSMUST00000038383	ENSMUSP00000039114	TRANSLATION	protein_coding	-	CCDS19992.1	1	316	31	9.16	5.9	200.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000061758	Akr1b10	ENSMUST00000115051	ENSMUSP00000110703	TRANSLATION	protein_coding	-	-	5	288	28	8.41	0	164.9	0	-4,-7	-	-	12.366	MINOR
ENSMUSG00000061758	Akr1b10	ENSMUST00000182055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061758	Akr1b10	ENSMUST00000144072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052955	Cpvl	ENSMUST00000204674	ENSMUSP00000144942	TRANSLATION	protein_coding	-	CCDS51777.1	1	478	7	5.95	3.9	348.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000052955	Cpvl	ENSMUST00000203101	ENSMUSP00000145288	TRANSLATION	protein_coding	-	CCDS85050.1	1	434	7	5.53	0.5	319.9	0	3,-2	-	-	15.468	MINOR
ENSMUSG00000052955	Cpvl	ENSMUST00000166545	ENSMUSP00000131462	TRANSLATION	protein_coding	-	CCDS51777.1	1	478	7	5.95	3.9	348.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000057666	Gapdh	ENSMUST00000182052	ENSMUSP00000138403	TRANSLATION	protein_coding	stop	-	2	55	1	1.83	0	64.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057666	Gapdh	ENSMUST00000147954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057666	Gapdh	ENSMUST00000118875	ENSMUSP00000113213	TRANSLATION	protein_coding	-	CCDS51913.1	1	333	23	7.16	21.5	369	0	-4,-1	-	-	21.736	PRINCIPAL:1
ENSMUSG00000057666	Gapdh	ENSMUST00000144205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057666	Gapdh	ENSMUST00000183272	ENSMUSP00000138508	TRANSLATION	protein_coding	stop	-	3	280	12	5.5	0	306.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057666	Gapdh	ENSMUST00000144588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057666	Gapdh	ENSMUST00000117757	ENSMUSP00000113942	TRANSLATION	protein_coding	-	CCDS80613.1	1	359	23	7.292	0.5	369	0	-4,-1	-	-	18	MINOR
ENSMUSG00000057666	Gapdh	ENSMUST00000182464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057666	Gapdh	ENSMUST00000192506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057666	Gapdh	ENSMUST00000073605	ENSMUSP00000073289	TRANSLATION	protein_coding	-	CCDS51913.1	1	333	23	7.16	21.5	369	0	-4,-1	-	-	21.736	PRINCIPAL:1
ENSMUSG00000057666	Gapdh	ENSMUST00000182115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057666	Gapdh	ENSMUST00000182277	ENSMUSP00000138295	TRANSLATION	protein_coding	stop	-	2	57	11	1.66	0	74.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057666	Gapdh	ENSMUST00000182670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045708	Olfr447	ENSMUST00000216408	ENSMUSP00000149325	TRANSLATION	protein_coding	-	CCDS20083.1	5	310	0	0.42	5.2	203.1	5	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045708	Olfr447	ENSMUST00000055763	ENSMUSP00000052312	TRANSLATION	protein_coding	-	CCDS20083.1	-	310	0	0.42	5.2	203.1	5	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000004264	Phb2	ENSMUST00000150847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004264	Phb2	ENSMUST00000143000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004264	Phb2	ENSMUST00000147974	ENSMUSP00000119316	TRANSLATION	protein_coding	start/stop	-	3	104	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004264	Phb2	ENSMUST00000145447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004264	Phb2	ENSMUST00000124779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004264	Phb2	ENSMUST00000004375	ENSMUSP00000004375	TRANSLATION	protein_coding	-	CCDS39627.1	5	299	0	0	12.8	81.5	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000004264	Phb2	ENSMUST00000129422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004264	Phb2	ENSMUST00000130279	ENSMUSP00000121535	TRANSLATION	protein_coding	start	-	5	157	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018999	Slc35b4	ENSMUST00000146514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018999	Slc35b4	ENSMUST00000138250	ENSMUSP00000138721	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000018999	Slc35b4	ENSMUST00000019143	ENSMUSP00000019143	TRANSLATION	protein_coding	-	CCDS19989.1	1	331	0	0	5.1	393.5	0	0,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000018999	Slc35b4	ENSMUST00000145857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029847	Slc23a4	ENSMUST00000044387	ENSMUSP00000041436	TRANSLATION	protein_coding	-	CCDS19998.1	1	322	0	1.33	0.5	170.2	5	-4,-7	-	-	0	MINOR
ENSMUSG00000029847	Slc23a4	ENSMUST00000144079	ENSMUSP00000122803	TRANSLATION	protein_coding	stop	-	5	249	0	0.33	0	136.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029847	Slc23a4	ENSMUST00000147169	ENSMUSP00000119927	TRANSLATION	protein_coding	start/stop	-	3	227	0	2.39	0	209.2	6	0,-4	-	-	-1	MINOR
ENSMUSG00000029847	Slc23a4	ENSMUST00000201355	ENSMUSP00000144387	TRANSLATION	protein_coding	-	-	5	615	0	4.51	1.5	321.7	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029847	Slc23a4	ENSMUST00000134874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057230	Aak1	ENSMUST00000113668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057230	Aak1	ENSMUST00000203647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057230	Aak1	ENSMUST00000204139	ENSMUSP00000158746	TRANSLATION	protein_coding	start	-	5	510	0	0	0	134.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057230	Aak1	ENSMUST00000204613	ENSMUSP00000158778	TRANSLATION	protein_coding	start/stop	-	3	237	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057230	Aak1	ENSMUST00000003710	ENSMUSP00000003710	TRANSLATION	protein_coding	-	CCDS20317.1	5	878	20	9.18	0.5	147.5	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000057230	Aak1	ENSMUST00000204414	ENSMUSP00000145013	TRANSLATION	protein_coding	stop	-	2	121	9	2.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057230	Aak1	ENSMUST00000156885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057230	Aak1	ENSMUST00000089519	ENSMUSP00000086948	TRANSLATION	protein_coding	-	CCDS39544.1	1	959	20	9.18	0.5	147.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000057230	Aak1	ENSMUST00000204793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095497	Igkv1-122	ENSMUST00000103314	ENSMUSP00000100115	TRANSLATION	IG_V_gene	stop	-	-	119	5	1.5	0	60.2	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076470	Trbv13-3	ENSMUST00000103271	ENSMUSP00000100087	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	67.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000008153	Clstn3	ENSMUST00000124998	ENSMUSP00000158892	TRANSLATION	protein_coding	-	-	2	191	0	0	0	0	0	2,-2	-	-	0	MINOR
ENSMUSG00000008153	Clstn3	ENSMUST00000112523	ENSMUSP00000108142	TRANSLATION	protein_coding	-	CCDS85156.1	1	919	12	2.46	0.5	29.5	1	-4,-5	-	-	17.346	ALTERNATIVE:2
ENSMUSG00000008153	Clstn3	ENSMUST00000156040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008153	Clstn3	ENSMUST00000239139	ENSMUSP00000159191	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008153	Clstn3	ENSMUST00000008297	ENSMUSP00000008297	TRANSLATION	protein_coding	-	CCDS20519.1	1	956	12	2.76	0.5	29.5	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000008153	Clstn3	ENSMUST00000143283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008153	Clstn3	ENSMUST00000150774	ENSMUSP00000145422	TRANSLATION	protein_coding	stop	-	5	64	3	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008153	Clstn3	ENSMUST00000238807	ENSMUSP00000158920	TRANSLATION	protein_coding	-	-	-	357	0	0	0	0	2	-1,-5	-	-	0	MINOR
ENSMUSG00000008153	Clstn3	ENSMUST00000147947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030276	Ttll3	ENSMUST00000203880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030276	Ttll3	ENSMUST00000203524	ENSMUSP00000145329	TRANSLATION	protein_coding	start	-	5	721	19	1.44	0	276.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030276	Ttll3	ENSMUST00000204683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030276	Ttll3	ENSMUST00000038889	ENSMUSP00000037870	TRANSLATION	protein_coding	-	-	5	928	19	1.44	0.5	276.9	0	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030276	Ttll3	ENSMUST00000205017	ENSMUSP00000145044	TRANSLATION	nonsense_mediated_decay	start	-	1	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030276	Ttll3	ENSMUST00000204026	ENSMUSP00000145049	TRANSLATION	protein_coding	-	CCDS85118.1	1	287	1	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030276	Ttll3	ENSMUST00000203925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030276	Ttll3	ENSMUST00000032414	ENSMUSP00000032414	TRANSLATION	protein_coding	-	CCDS39593.2	1	927	19	1.44	0.5	276.9	0	-2,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030276	Ttll3	ENSMUST00000204255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043541	Casc1	ENSMUST00000111727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043541	Casc1	ENSMUST00000060797	ENSMUSP00000062279	TRANSLATION	protein_coding	-	CCDS39705.1	1	730	0	0	0.5	198.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000043541	Casc1	ENSMUST00000203558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043541	Casc1	ENSMUST00000205162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043541	Casc1	ENSMUST00000128070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043541	Casc1	ENSMUST00000111728	ENSMUSP00000107357	TRANSLATION	protein_coding	-	-	2	679	0	0	0	198.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000043541	Casc1	ENSMUST00000133671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043541	Casc1	ENSMUST00000204105	ENSMUSP00000144783	TRANSLATION	protein_coding	-	-	1	644	0	0	0	198.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000043541	Casc1	ENSMUST00000152138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090685	Atp6v1fnb	ENSMUST00000171317	ENSMUSP00000127891	TRANSLATION	protein_coding	-	CCDS51737.1	1	177	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000030194	Tas2r116	ENSMUST00000032315	ENSMUSP00000032315	TRANSLATION	protein_coding	-	CCDS20625.1	-	305	0	0	0.5	292.8	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057497	Fam136a	ENSMUST00000071492	ENSMUSP00000071426	TRANSLATION	protein_coding	-	CCDS20309.1	1	138	0	0	12.3	154.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057497	Fam136a	ENSMUST00000203237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057497	Fam136a	ENSMUST00000204893	ENSMUSP00000145530	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	0	0	90.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000132736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000144752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000138385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000040259	ENSMUSP00000039381	TRANSLATION	protein_coding	-	CCDS20010.1	1	833	0	13.05	0.5	1092.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000114908	ENSMUSP00000110558	TRANSLATION	protein_coding	-	CCDS20010.1	1	833	0	13.05	0.5	1092.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000130816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038600	Atp6v0a4	ENSMUST00000135594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000081649	Olfr213	ENSMUST00000121958	ENSMUSP00000112931	TRANSLATION	protein_coding	-	CCDS20455.1	-	327	0	0.36	1.5	152.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000081649	Olfr213	ENSMUST00000220008	ENSMUSP00000151916	TRANSLATION	protein_coding	-	CCDS20455.1	5	327	0	0.36	1.5	152.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030188	Magohb	ENSMUST00000173332	ENSMUSP00000133708	TRANSLATION	nonsense_mediated_decay	start	-	5	44	0	1.38	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030188	Magohb	ENSMUST00000174781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030188	Magohb	ENSMUST00000032307	ENSMUSP00000032307	TRANSLATION	protein_coding	-	CCDS39670.2	1	148	0	4.58	17	267.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030188	Magohb	ENSMUST00000173837	ENSMUSP00000134663	TRANSLATION	protein_coding	-	CCDS85172.1	5	102	0	3	5.1	173.3	0	-4,-5	-	-	4.228	MINOR
ENSMUSG00000030188	Magohb	ENSMUST00000173198	ENSMUSP00000134494	TRANSLATION	nonsense_mediated_decay	start	-	5	44	0	1.38	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030188	Magohb	ENSMUST00000172883	ENSMUSP00000133553	TRANSLATION	nonsense_mediated_decay	start	-	5	35	0	0.75	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030188	Magohb	ENSMUST00000174488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000204495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000203161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000204446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000204476	ENSMUSP00000144982	TRANSLATION	protein_coding	stop	-	1	900	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024104	Washc2	ENSMUST00000203928	ENSMUSP00000145146	TRANSLATION	protein_coding	start/stop	-	1	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024104	Washc2	ENSMUST00000203523	ENSMUSP00000144923	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024104	Washc2	ENSMUST00000203297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000203802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000204283	ENSMUSP00000144703	TRANSLATION	protein_coding	stop	-	5	1051	0	0	0	191.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024104	Washc2	ENSMUST00000203980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024104	Washc2	ENSMUST00000036759	ENSMUSP00000038983	TRANSLATION	protein_coding	-	CCDS20450.1	1	1334	0	0	0.5	191.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024104	Washc2	ENSMUST00000204051	ENSMUSP00000144771	TRANSLATION	protein_coding	stop	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024104	Washc2	ENSMUST00000203286	ENSMUSP00000145121	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029868	Trpv6	ENSMUST00000031902	ENSMUSP00000031902	TRANSLATION	protein_coding	-	-	1	767	0	14.05	0.5	148.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029868	Trpv6	ENSMUST00000194405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068250	Amn1	ENSMUST00000127743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068250	Amn1	ENSMUST00000149149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068250	Amn1	ENSMUST00000156864	ENSMUSP00000145210	TRANSLATION	nonsense_mediated_decay	start	-	3	130	0	0.38	0	15	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068250	Amn1	ENSMUST00000134181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068250	Amn1	ENSMUST00000150610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068250	Amn1	ENSMUST00000095319	ENSMUSP00000092957	TRANSLATION	protein_coding	-	-	1	215	0	1.4	3.5	40.4	0	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000068250	Amn1	ENSMUST00000152062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068250	Amn1	ENSMUST00000141346	ENSMUSP00000116060	TRANSLATION	protein_coding	stop	-	3	121	0	0.54	0	29.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068250	Amn1	ENSMUST00000111535	ENSMUSP00000107160	TRANSLATION	protein_coding	-	CCDS51961.1	5	258	0	1.4	2.8	40.4	0	-4,-6	-	-	12.72	PRINCIPAL:2
ENSMUSG00000068250	Amn1	ENSMUST00000204681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068250	Amn1	ENSMUST00000203043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086040	Wipf3	ENSMUST00000128480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086040	Wipf3	ENSMUST00000163746	ENSMUSP00000132022	TRANSLATION	protein_coding	-	CCDS51780.1	5	449	0	0	0.5	38.2	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000086040	Wipf3	ENSMUST00000131043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086040	Wipf3	ENSMUST00000172046	ENSMUSP00000132138	TRANSLATION	protein_coding	-	CCDS51779.1	5	483	0	0	0.5	38.2	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000086040	Wipf3	ENSMUST00000132855	ENSMUSP00000120240	TRANSLATION	protein_coding	-	CCDS51779.1	5	483	0	0	0.5	38.2	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000086040	Wipf3	ENSMUST00000126637	ENSMUSP00000116325	TRANSLATION	protein_coding	-	CCDS51780.1	5	449	0	0	0.5	38.2	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000076535	Igkv1-88	ENSMUST00000103336	ENSMUSP00000100137	TRANSLATION	IG_V_gene	stop	-	-	120	5	1.4	0	53.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030301	Ccdc91	ENSMUST00000111614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030301	Ccdc91	ENSMUST00000156106	ENSMUSP00000122635	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030301	Ccdc91	ENSMUST00000032441	ENSMUSP00000032441	TRANSLATION	protein_coding	-	CCDS20707.1	1	442	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000030301	Ccdc91	ENSMUST00000203659	ENSMUSP00000144722	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029840	Mtpn	ENSMUST00000031866	ENSMUSP00000031866	TRANSLATION	protein_coding	-	CCDS20002.1	1	118	0	3.41	19.5	91.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029840	Mtpn	ENSMUST00000201026	ENSMUSP00000144482	TRANSLATION	protein_coding	stop	-	3	73	0	2	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045725	Prr15	ENSMUST00000059138	ENSMUSP00000049549	TRANSLATION	protein_coding	-	CCDS20155.1	1	122	0	0	0.5	81.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045725	Prr15	ENSMUST00000204057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002416	Ndufb2	ENSMUST00000119379	ENSMUSP00000114095	TRANSLATION	protein_coding	-	CCDS20025.1	1	105	0	1.75	8.8	125.8	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000002416	Ndufb2	ENSMUST00000002490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002416	Ndufb2	ENSMUST00000128064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002416	Ndufb2	ENSMUST00000135239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002416	Ndufb2	ENSMUST00000135671	ENSMUSP00000118918	TRANSLATION	protein_coding	-	CCDS20025.1	1	105	0	1.75	8.8	125.8	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000002416	Ndufb2	ENSMUST00000146793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056203	Tas2r135	ENSMUST00000070178	ENSMUSP00000070247	TRANSLATION	protein_coding	-	CCDS20069.1	-	321	0	0	1.5	207	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052581	Lrrtm4	ENSMUST00000128718	ENSMUSP00000114425	TRANSLATION	protein_coding	stop	-	2	49	0	0.6	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000052581	Lrrtm4	ENSMUST00000074662	ENSMUSP00000074232	TRANSLATION	protein_coding	-	CCDS20259.2	2	518	0	2	2.9	172.6	1	2,-3	-	-	12.876	MINOR
ENSMUSG00000052581	Lrrtm4	ENSMUST00000133918	ENSMUSP00000115016	TRANSLATION	protein_coding	-	-	5	590	0	2	7.5	165.9	1	2,-3	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000052581	Lrrtm4	ENSMUST00000136421	ENSMUSP00000121621	TRANSLATION	protein_coding	-	CCDS71779.1	1	519	0	2	2.9	172.6	1	2,-3	-	-	12.876	MINOR
ENSMUSG00000052581	Lrrtm4	ENSMUST00000147663	ENSMUSP00000117263	TRANSLATION	protein_coding	-	CCDS71778.1	1	591	0	2	7.5	165.9	1	2,-3	-	-	14.598	PRINCIPAL:2
ENSMUSG00000052581	Lrrtm4	ENSMUST00000126399	ENSMUSP00000121124	TRANSLATION	protein_coding	-	-	5	590	0	2	7.5	165.9	1	2,-3	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000052581	Lrrtm4	ENSMUST00000126005	ENSMUSP00000117445	TRANSLATION	protein_coding	-	CCDS20259.2	5	518	0	2	2.9	172.6	1	2,-3	-	-	12.876	MINOR
ENSMUSG00000052581	Lrrtm4	ENSMUST00000145407	ENSMUSP00000114465	TRANSLATION	protein_coding	stop	-	2	104	0	1.4	0	31.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000029864	Gstk1	ENSMUST00000031897	ENSMUSP00000031897	TRANSLATION	protein_coding	-	CCDS20063.1	1	226	11	6.5	1.5	191.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029864	Gstk1	ENSMUST00000203174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029864	Gstk1	ENSMUST00000204792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029864	Gstk1	ENSMUST00000204088	ENSMUSP00000145070	TRANSLATION	nonsense_mediated_decay	-	-	1	143	5	4	0	125	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030292	Smco2	ENSMUST00000148099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030292	Smco2	ENSMUST00000128575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030292	Smco2	ENSMUST00000205239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030292	Smco2	ENSMUST00000032433	ENSMUSP00000032433	TRANSLATION	protein_coding	-	CCDS51955.1	1	347	0	0	1.5	120.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048697	Vmn1r26	ENSMUST00000228040	ENSMUSP00000154514	TRANSLATION	protein_coding	-	CCDS20190.1	-	339	0	0	0.5	181.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048697	Vmn1r26	ENSMUST00000228070	ENSMUSP00000154594	TRANSLATION	protein_coding	-	CCDS20190.1	-	339	0	0	0.5	181.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048697	Vmn1r26	ENSMUST00000049694	ENSMUSP00000052301	TRANSLATION	protein_coding	-	CCDS20190.1	-	339	0	0	0.5	181.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048697	Vmn1r26	ENSMUST00000228951	ENSMUSP00000154463	TRANSLATION	protein_coding	-	CCDS20190.1	-	339	0	0	0.5	181.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038236	Hoxa7	ENSMUST00000153280	ENSMUSP00000134641	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038236	Hoxa7	ENSMUST00000134367	ENSMUSP00000134610	TRANSLATION	protein_coding	-	-	5	156	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000038236	Hoxa7	ENSMUST00000150041	ENSMUSP00000140519	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038236	Hoxa7	ENSMUST00000048715	ENSMUSP00000048648	TRANSLATION	protein_coding	-	CCDS20145.1	1	229	0	2.48	1.5	75.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038236	Hoxa7	ENSMUST00000140316	ENSMUSP00000138790	TRANSLATION	protein_coding	-	-	3	182	0	0.4	0	0	0	-4,-7	-	-	0.966	MINOR
ENSMUSG00000092004	Gm17482	ENSMUST00000166681	ENSMUSP00000126747	TRANSLATION	protein_coding	start/stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000003452	Bicd1	ENSMUST00000174886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003452	Bicd1	ENSMUST00000173408	ENSMUSP00000133727	TRANSLATION	nonsense_mediated_decay	-	-	5	827	0	2	8.3	1159.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003452	Bicd1	ENSMUST00000140759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003452	Bicd1	ENSMUST00000003544	ENSMUSP00000003544	TRANSLATION	protein_coding	-	-	5	975	0	2	6.3	1159.8	0	-4,-5	-	-	14.178	ALTERNATIVE:1
ENSMUSG00000003452	Bicd1	ENSMUST00000086829	ENSMUSP00000084039	TRANSLATION	protein_coding	-	CCDS39723.1	1	835	0	2	8.3	1159.8	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000003452	Bicd1	ENSMUST00000111513	ENSMUSP00000107138	TRANSLATION	protein_coding	-	CCDS51962.1	1	826	0	2	1.5	1159.8	0	-4,-5	-	-	12.204	MINOR
ENSMUSG00000003452	Bicd1	ENSMUST00000203502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003452	Bicd1	ENSMUST00000130270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003452	Bicd1	ENSMUST00000172926	ENSMUSP00000133986	TRANSLATION	protein_coding	start/stop	-	5	137	0	2	0	224.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060780	Lrrtm1	ENSMUST00000161677	ENSMUSP00000124373	TRANSLATION	protein_coding	-	CCDS39522.1	1	522	0	1.4	9.5	135.6	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000060780	Lrrtm1	ENSMUST00000161811	ENSMUSP00000124948	TRANSLATION	protein_coding	stop	-	3	183	0	0.8	0	96.9	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000060780	Lrrtm1	ENSMUST00000020400	ENSMUSP00000020400	TRANSLATION	nonsense_mediated_decay	-	-	1	522	0	1.4	9.5	135.6	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000060780	Lrrtm1	ENSMUST00000159616	ENSMUSP00000125207	TRANSLATION	protein_coding	-	CCDS39522.1	1	522	0	1.4	9.5	135.6	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000095338	Igkv3-9	ENSMUST00000103398	ENSMUSP00000100199	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	67.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000005892	Trh	ENSMUST00000006046	ENSMUSP00000006046	TRANSLATION	protein_coding	-	CCDS20375.1	1	256	0	0	1.5	111.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034744	Nagk	ENSMUST00000205599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034744	Nagk	ENSMUST00000151147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034744	Nagk	ENSMUST00000141611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034744	Nagk	ENSMUST00000150322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034744	Nagk	ENSMUST00000146117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034744	Nagk	ENSMUST00000113850	ENSMUSP00000109481	TRANSLATION	protein_coding	-	-	5	337	27	6.08	1	0	0	-4,-5	-	-	4.5	MINOR
ENSMUSG00000034744	Nagk	ENSMUST00000128262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034744	Nagk	ENSMUST00000037376	ENSMUSP00000042026	TRANSLATION	protein_coding	-	CCDS20286.1	1	343	30	8.83	6.3	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034744	Nagk	ENSMUST00000113851	ENSMUSP00000109482	TRANSLATION	protein_coding	-	CCDS85072.1	1	361	29	8.5	0.5	0	0	-4,-2	-	-	10.674	MINOR
ENSMUSG00000034744	Nagk	ENSMUST00000205681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095007	Igkv12-41	ENSMUST00000103369	ENSMUSP00000100170	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.12	0	62.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094315	Igkv4-78	ENSMUST00000103343	ENSMUSP00000100144	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	57.7	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000034777	Vax2	ENSMUST00000037807	ENSMUSP00000035976	TRANSLATION	protein_coding	-	CCDS20282.1	1	292	0	0.8	5.1	77.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030339	Ltbr	ENSMUST00000160901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030339	Ltbr	ENSMUST00000032489	ENSMUSP00000032489	TRANSLATION	protein_coding	-	CCDS20549.1	1	415	0	4.55	1.5	89.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000030339	Ltbr	ENSMUST00000161891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032652	Crebl2	ENSMUST00000145643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032652	Crebl2	ENSMUST00000111937	ENSMUSP00000107568	TRANSLATION	protein_coding	-	-	3	84	0	0	0	31.7	0	-4,-5	-	-	5.646	MINOR
ENSMUSG00000032652	Crebl2	ENSMUST00000203742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032652	Crebl2	ENSMUST00000046303	ENSMUSP00000035304	TRANSLATION	protein_coding	-	CCDS20640.1	1	123	0	0	12.8	33.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000076539	Igkv4-81	ENSMUST00000103340	ENSMUSP00000100141	TRANSLATION	IG_V_gene	start/stop	-	-	96	2	1	0	58.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076539	Igkv4-81	ENSMUST00000197966	ENSMUSP00000142950	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	58.7	0	-1,-4	-	-	-1	PRINCIPAL:5
ENSMUSG00000058499	Pip	ENSMUST00000075351	ENSMUSP00000074818	TRANSLATION	protein_coding	-	CCDS39469.1	1	146	0	2.8	0.5	177.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058499	Pip	ENSMUST00000203244	ENSMUSP00000144995	TRANSLATION	protein_coding	-	-	3	107	0	1.8	0	143.3	0	3,-2	-	-	7.806	MINOR
ENSMUSG00000058499	Pip	ENSMUST00000204575	ENSMUSP00000144926	TRANSLATION	protein_coding	start	-	1	69	0	0.8	0	76.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034269	Setd5	ENSMUST00000143998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000204377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000136128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034269	Setd5	ENSMUST00000153513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034269	Setd5	ENSMUST00000125003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034269	Setd5	ENSMUST00000124467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000113155	ENSMUSP00000108780	TRANSLATION	protein_coding	-	-	1	1460	7	3	6.3	24.9	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000034269	Setd5	ENSMUST00000156048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034269	Setd5	ENSMUST00000113157	ENSMUSP00000108782	TRANSLATION	protein_coding	-	-	5	1460	7	3	6.3	24.9	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000034269	Setd5	ENSMUST00000141072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000150107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000138327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034269	Setd5	ENSMUST00000042889	ENSMUSP00000047398	TRANSLATION	protein_coding	-	CCDS20411.1	1	1441	7	3	6.3	24.9	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000034269	Setd5	ENSMUST00000149584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045479	Olfr459	ENSMUST00000214976	ENSMUSP00000149928	TRANSLATION	protein_coding	-	CCDS20056.1	2	314	0	0.28	7.5	155.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000045479	Olfr459	ENSMUST00000214752	ENSMUSP00000151070	TRANSLATION	protein_coding	-	CCDS20056.1	5	314	0	0.28	7.5	155.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000045479	Olfr459	ENSMUST00000050412	ENSMUSP00000061622	TRANSLATION	protein_coding	-	CCDS20056.1	-	314	0	0.28	7.5	155.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000107539	Gm44790	ENSMUST00000204137	ENSMUSP00000145002	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	103	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000029767	Calu	ENSMUST00000174096	ENSMUSP00000133945	TRANSLATION	nonsense_mediated_decay	start	-	5	141	15	1.7084	0	17.6	0	0,-3	-	-	-1	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000031779	ENSMUSP00000031779	TRANSLATION	protein_coding	-	CCDS19957.1	1	315	34	4.6784	13.3	68.4	0	2,-1	-	-	20.384	PRINCIPAL:1
ENSMUSG00000029767	Calu	ENSMUST00000138523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029767	Calu	ENSMUST00000173216	ENSMUSP00000134708	TRANSLATION	protein_coding	-	-	5	163	19	2.67	1.7	50.8	0	-4,-5	-	-	5.886	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000172974	ENSMUSP00000133390	TRANSLATION	protein_coding	-	-	5	227	24	3.5584	1.2	36	0	2,-1	-	-	6.446	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000173694	ENSMUSP00000133436	TRANSLATION	protein_coding	-	-	5	154	14	1.3	0	50	0	2,-1	-	-	3.648	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000172607	ENSMUSP00000133609	TRANSLATION	protein_coding	start	-	3	74	9	0.85	0	32.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000156163	ENSMUSP00000133615	TRANSLATION	protein_coding	start	-	2	168	15	2.7284	0	18.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029767	Calu	ENSMUST00000090481	ENSMUSP00000087967	TRANSLATION	protein_coding	-	CCDS19958.1	1	315	31	3.45	15.5	82.2	0	2,-1	-	-	17.548	MINOR
ENSMUSG00000030134	Rasgef1a	ENSMUST00000203804	ENSMUSP00000145214	TRANSLATION	protein_coding	-	-	1	498	0	5.193	0	214.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000030134	Rasgef1a	ENSMUST00000203482	ENSMUSP00000145077	TRANSLATION	protein_coding	-	CCDS51883.1	1	489	0	4.995	6.3	214.3	0	-4,-5	-	-	13.604	PRINCIPAL:3
ENSMUSG00000030134	Rasgef1a	ENSMUST00000164960	ENSMUSP00000132244	TRANSLATION	protein_coding	-	CCDS85141.1	5	481	0	4.995	6.3	214.3	0	-4,-6	-	-	13.604	ALTERNATIVE:1
ENSMUSG00000072662	Mansc4	ENSMUST00000123367	ENSMUSP00000144765	TRANSLATION	protein_coding	-	-	2	149	0	0	0	33.8	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000072662	Mansc4	ENSMUST00000100780	ENSMUSP00000098343	TRANSLATION	protein_coding	-	CCDS20705.1	1	337	0	0	0.5	31.4	0	3,-2	-	-	5.574	PRINCIPAL:2
ENSMUSG00000030008	Pradc1	ENSMUST00000139875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030008	Pradc1	ENSMUST00000122907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030008	Pradc1	ENSMUST00000032080	ENSMUSP00000032080	TRANSLATION	protein_coding	-	CCDS51828.1	1	188	0	0	6.4	29.3	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030008	Pradc1	ENSMUST00000154918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030008	Pradc1	ENSMUST00000146086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030008	Pradc1	ENSMUST00000203934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030008	Pradc1	ENSMUST00000113770	ENSMUSP00000109400	TRANSLATION	protein_coding	-	CCDS39538.1	1	132	0	0	1.5	0	0	3,-2	-	-	0.186	MINOR
ENSMUSG00000030008	Pradc1	ENSMUST00000126805	ENSMUSP00000145290	TRANSLATION	protein_coding	-	-	2	61	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079477	Rab7	ENSMUST00000203674	ENSMUSP00000145215	TRANSLATION	protein_coding	-	-	5	88	14	2.316	0	99.1	0	-4,-7	-	-	1.53	MINOR
ENSMUSG00000079477	Rab7	ENSMUST00000095048	ENSMUSP00000092658	TRANSLATION	protein_coding	-	CCDS39552.1	1	207	21	5.75	21.5	195.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079477	Rab7	ENSMUST00000204126	ENSMUSP00000145097	TRANSLATION	protein_coding	stop	-	3	98	14	2.75	0	124.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079477	Rab7	ENSMUST00000113597	ENSMUSP00000109227	TRANSLATION	protein_coding	-	CCDS39552.1	1	207	21	5.75	21.5	195.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079477	Rab7	ENSMUST00000113598	ENSMUSP00000109228	TRANSLATION	protein_coding	-	CCDS39552.1	1	207	21	5.75	21.5	195.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079477	Rab7	ENSMUST00000113596	ENSMUSP00000109226	TRANSLATION	protein_coding	-	CCDS39552.1	1	207	21	5.75	21.5	195.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079477	Rab7	ENSMUST00000113600	ENSMUSP00000109230	TRANSLATION	protein_coding	-	CCDS39552.1	1	207	21	5.75	21.5	195.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079523	Tmsb10	ENSMUST00000144337	ENSMUSP00000145075	TRANSLATION	protein_coding	-	-	2	67	0	1	0	65	0	-4,-5	-	-	9.222	MINOR
ENSMUSG00000079523	Tmsb10	ENSMUST00000114049	ENSMUSP00000109683	TRANSLATION	protein_coding	-	CCDS39519.1	1	44	0	1.33	19.5	82.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079523	Tmsb10	ENSMUST00000114048	ENSMUSP00000109682	TRANSLATION	protein_coding	-	CCDS39519.1	3	44	0	1.33	19.5	82.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079523	Tmsb10	ENSMUST00000114050	ENSMUSP00000109684	TRANSLATION	protein_coding	-	CCDS39519.1	1	44	0	1.33	19.5	82.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000076473	Trbv16	ENSMUST00000103274	ENSMUSP00000100090	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	58	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000071494	Olfr455	ENSMUST00000171307	ENSMUSP00000130187	TRANSLATION	protein_coding	-	CCDS39473.2	-	317	0	0.32	1.5	132.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071494	Olfr455	ENSMUST00000217978	ENSMUSP00000151418	TRANSLATION	protein_coding	-	CCDS39473.2	5	317	0	0.32	1.5	132.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030361	Klrb1a	ENSMUST00000032512	ENSMUSP00000032512	TRANSLATION	protein_coding	-	CCDS20574.2	1	233	0	4.029	0.5	78.2	2	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000030361	Klrb1a	ENSMUST00000203150	ENSMUSP00000144707	TRANSLATION	protein_coding	stop	-	5	83	0	0.579	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030361	Klrb1a	ENSMUST00000171306	ENSMUSP00000132390	TRANSLATION	protein_coding	-	CCDS51918.1	1	200	0	4.029	0.5	78.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030361	Klrb1a	ENSMUST00000203275	ENSMUSP00000145086	TRANSLATION	protein_coding	stop	-	5	216	0	3.765	0	78.2	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030361	Klrb1a	ENSMUST00000204819	ENSMUSP00000145519	TRANSLATION	protein_coding	stop	-	5	225	0	4.029	0	78.2	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000091734	Vmn1r29	ENSMUST00000228909	ENSMUSP00000154278	TRANSLATION	protein_coding	-	CCDS20194.1	-	303	0	0	1.5	176.5	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091734	Vmn1r29	ENSMUST00000168416	ENSMUSP00000129069	TRANSLATION	protein_coding	-	CCDS20194.1	-	303	0	0	1.5	176.5	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091734	Vmn1r29	ENSMUST00000228038	ENSMUSP00000154376	TRANSLATION	protein_coding	-	CCDS20194.1	-	303	0	0	1.5	176.5	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091734	Vmn1r29	ENSMUST00000226971	ENSMUSP00000154612	TRANSLATION	protein_coding	-	CCDS20194.1	-	303	0	0	1.5	176.5	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091734	Vmn1r29	ENSMUST00000227761	ENSMUSP00000153943	TRANSLATION	protein_coding	-	CCDS20194.1	-	303	0	0	1.5	176.5	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033634	Nat8f2	ENSMUST00000045008	ENSMUSP00000044587	TRANSLATION	protein_coding	-	CCDS20302.1	1	238	22	0.2	0.5	62.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056666	Retsat	ENSMUST00000176168	ENSMUSP00000135421	TRANSLATION	protein_coding	-	-	5	400	18	1.6	0	0	0	3,-1	-	-	3.246	MINOR
ENSMUSG00000056666	Retsat	ENSMUST00000070597	ENSMUSP00000068568	TRANSLATION	protein_coding	-	CCDS20244.1	1	609	35	2.96	3.9	51	0	3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000056666	Retsat	ENSMUST00000175824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056666	Retsat	ENSMUST00000129071	ENSMUSP00000116567	TRANSLATION	protein_coding	start	-	2	99	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056666	Retsat	ENSMUST00000205878	ENSMUSP00000146069	TRANSLATION	protein_coding	start	-	5	147	2	0.32	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056666	Retsat	ENSMUST00000176364	ENSMUSP00000134847	TRANSLATION	protein_coding	-	-	5	548	19	2.16	0	0	0	3,-1	-	-	4.38	MINOR
ENSMUSG00000029860	Zyx	ENSMUST00000203652	ENSMUSP00000145451	TRANSLATION	protein_coding	-	CCDS20066.1	1	564	22	2.72	1.5	137.6	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000029860	Zyx	ENSMUST00000204270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029860	Zyx	ENSMUST00000204480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029860	Zyx	ENSMUST00000070635	ENSMUSP00000070427	TRANSLATION	protein_coding	-	CCDS85034.1	1	533	22	2.72	0.5	137.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000029860	Zyx	ENSMUST00000203401	ENSMUSP00000145236	TRANSLATION	protein_coding	-	CCDS85034.1	1	533	22	2.72	0.5	137.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000029860	Zyx	ENSMUST00000203290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029860	Zyx	ENSMUST00000203846	ENSMUSP00000145189	TRANSLATION	protein_coding	stop	-	3	212	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029860	Zyx	ENSMUST00000203849	ENSMUSP00000145052	TRANSLATION	protein_coding	stop	-	2	109	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029860	Zyx	ENSMUST00000203329	ENSMUSP00000144863	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029860	Zyx	ENSMUST00000164375	ENSMUSP00000126622	TRANSLATION	protein_coding	-	CCDS20066.1	1	564	22	2.72	1.5	137.6	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000029860	Zyx	ENSMUST00000203626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030353	Tead4	ENSMUST00000006311	ENSMUSP00000006311	TRANSLATION	protein_coding	-	-	1	427	0	9.1	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030353	Tead4	ENSMUST00000133118	ENSMUSP00000120941	TRANSLATION	protein_coding	stop	-	2	54	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030353	Tead4	ENSMUST00000143004	ENSMUSP00000118606	TRANSLATION	protein_coding	stop	-	3	38	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030353	Tead4	ENSMUST00000130454	ENSMUSP00000118083	TRANSLATION	protein_coding	-	-	5	384	0	8.1	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000030353	Tead4	ENSMUST00000112157	ENSMUSP00000107784	TRANSLATION	protein_coding	-	-	1	384	0	8.1	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000023191	P3h3	ENSMUST00000135546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023191	P3h3	ENSMUST00000149870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023191	P3h3	ENSMUST00000126987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023191	P3h3	ENSMUST00000135127	ENSMUSP00000116338	TRANSLATION	nonsense_mediated_decay	-	-	2	337	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023191	P3h3	ENSMUST00000129225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023191	P3h3	ENSMUST00000147296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023191	P3h3	ENSMUST00000023958	ENSMUSP00000023958	TRANSLATION	protein_coding	-	CCDS20533.1	1	732	3	0	0.5	35.1	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000029817	Tra2a	ENSMUST00000204189	ENSMUSP00000145039	TRANSLATION	protein_coding	-	CCDS85044.1	1	280	0	2	1.5	69.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029817	Tra2a	ENSMUST00000204013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029817	Tra2a	ENSMUST00000203820	ENSMUSP00000144908	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029817	Tra2a	ENSMUST00000031841	ENSMUSP00000031841	TRANSLATION	protein_coding	-	CCDS39486.1	5	282	0	2	1.5	69.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029817	Tra2a	ENSMUST00000204818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000124686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000141483	ENSMUSP00000125275	TRANSLATION	protein_coding	stop	-	5	177	0	4.13	0	72.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000029661	Col1a2	ENSMUST00000031668	ENSMUSP00000031668	TRANSLATION	protein_coding	-	CCDS39420.1	1	1372	5	33.76	1.5	512.2	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000029661	Col1a2	ENSMUST00000155687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000132029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000203346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000138511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029661	Col1a2	ENSMUST00000148864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030075	Cntn3	ENSMUST00000203619	ENSMUSP00000145176	TRANSLATION	protein_coding	-	CCDS39581.1	1	1028	0	19.95	6.3	368.3	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030075	Cntn3	ENSMUST00000204990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030075	Cntn3	ENSMUST00000032159	ENSMUSP00000032159	TRANSLATION	protein_coding	-	CCDS39581.1	2	1028	0	19.95	6.3	368.3	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000094319	Igkv4-54	ENSMUST00000199437	ENSMUSP00000142893	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	52	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000094319	Igkv4-54	ENSMUST00000177697	ENSMUSP00000136516	TRANSLATION	protein_coding	start/stop	-	-	96	2	1	0	52	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000030096	Slc6a6	ENSMUST00000206988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030096	Slc6a6	ENSMUST00000205480	ENSMUSP00000145794	TRANSLATION	protein_coding	stop	-	5	110	0	1.73	0	122.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000030096	Slc6a6	ENSMUST00000205828	ENSMUSP00000146312	TRANSLATION	protein_coding	stop	-	5	83	0	1.13	0	82.2	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000030096	Slc6a6	ENSMUST00000205477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030096	Slc6a6	ENSMUST00000206451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030096	Slc6a6	ENSMUST00000205443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030096	Slc6a6	ENSMUST00000205663	ENSMUSP00000145986	TRANSLATION	nonsense_mediated_decay	start	-	5	49	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030096	Slc6a6	ENSMUST00000032185	ENSMUSP00000032185	TRANSLATION	protein_coding	-	CCDS39570.1	1	621	0	12.11	11.5	795.4	12	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030096	Slc6a6	ENSMUST00000206835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030096	Slc6a6	ENSMUST00000205764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030096	Slc6a6	ENSMUST00000206545	ENSMUSP00000146306	TRANSLATION	protein_coding	stop	-	3	121	0	2.06	0	144.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000043298	Smco3	ENSMUST00000203468	ENSMUSP00000144838	TRANSLATION	protein_coding	-	CCDS20656.1	1	225	0	0	10.8	207.4	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000043298	Smco3	ENSMUST00000111894	ENSMUSP00000107525	TRANSLATION	protein_coding	-	CCDS20656.1	1	225	0	0	10.8	207.4	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000043298	Smco3	ENSMUST00000068293	ENSMUSP00000066235	TRANSLATION	protein_coding	-	CCDS20656.1	1	225	0	0	10.8	207.4	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000051397	Tacstd2	ENSMUST00000058178	ENSMUSP00000060099	TRANSLATION	protein_coding	-	CCDS20221.1	-	317	0	0.8	1.5	41.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000045009	Prrt3	ENSMUST00000204134	ENSMUSP00000145031	TRANSLATION	protein_coding	-	CCDS85122.1	1	972	0	0	0.5	0	5	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000045009	Prrt3	ENSMUST00000204268	ENSMUSP00000145443	TRANSLATION	protein_coding	-	CCDS85122.1	1	972	0	0	0.5	0	5	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000045009	Prrt3	ENSMUST00000205075	ENSMUSP00000145089	TRANSLATION	protein_coding	-	-	2	417	0	0	0	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000045009	Prrt3	ENSMUST00000205170	ENSMUSP00000145183	TRANSLATION	protein_coding	-	-	2	417	0	0	0	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000045009	Prrt3	ENSMUST00000101059	ENSMUSP00000098620	TRANSLATION	protein_coding	-	CCDS20424.1	1	971	0	0	0.5	0	5	2,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000072623	Zfp9	ENSMUST00000161170	ENSMUSP00000123810	TRANSLATION	protein_coding	-	CCDS51885.1	1	454	48	1.8	1.5	356.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072623	Zfp9	ENSMUST00000204066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056643	Chst13	ENSMUST00000070890	ENSMUSP00000064897	TRANSLATION	protein_coding	-	CCDS51847.1	3	336	0	0	1.5	183	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037788	Vopp1	ENSMUST00000114297	ENSMUSP00000109936	TRANSLATION	protein_coding	-	CCDS39497.1	1	172	0	0	7.1	0	1	4,-1	-	-	3	PRINCIPAL:1
ENSMUSG00000037788	Vopp1	ENSMUST00000127485	ENSMUSP00000115377	TRANSLATION	protein_coding	-	-	1	114	0	0	0	0	1	4,-1	-	-	0	MINOR
ENSMUSG00000037788	Vopp1	ENSMUST00000143953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037788	Vopp1	ENSMUST00000204878	ENSMUSP00000144953	TRANSLATION	protein_coding	stop	-	2	80	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037788	Vopp1	ENSMUST00000145608	ENSMUSP00000145084	TRANSLATION	protein_coding	-	-	1	122	0	0	0	0	1	4,-1	-	-	0	MINOR
ENSMUSG00000037788	Vopp1	ENSMUST00000203212	ENSMUSP00000144859	TRANSLATION	protein_coding	stop	-	2	37	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000012396	Nanog	ENSMUST00000012540	ENSMUSP00000012540	TRANSLATION	protein_coding	-	CCDS39623.1	1	305	0	1.75	0.5	66.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000012396	Nanog	ENSMUST00000112581	ENSMUSP00000108200	TRANSLATION	protein_coding	-	CCDS80607.1	1	280	0	1.75	0.5	66.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000012396	Nanog	ENSMUST00000112580	ENSMUSP00000108199	TRANSLATION	protein_coding	-	CCDS80607.1	1	280	0	1.75	0.5	66.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030068	Gm20696	ENSMUST00000155466	ENSMUSP00000135058	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	74	0	1.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030068	Gm20696	ENSMUST00000176255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030068	Gm20696	ENSMUST00000176148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050241	Klre1	ENSMUST00000053708	ENSMUSP00000055779	TRANSLATION	protein_coding	-	CCDS20589.1	1	226	0	3.2	0.5	46.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050241	Klre1	ENSMUST00000203322	ENSMUSP00000145085	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050241	Klre1	ENSMUST00000203865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009112	Bcl2l13	ENSMUST00000204004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009112	Bcl2l13	ENSMUST00000009256	ENSMUSP00000009256	TRANSLATION	protein_coding	-	CCDS20485.1	1	434	0	0	0.5	42.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000009112	Bcl2l13	ENSMUST00000203584	ENSMUSP00000145341	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009112	Bcl2l13	ENSMUST00000203037	ENSMUSP00000145390	TRANSLATION	protein_coding	stop	-	5	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060699	Vmn1r35	ENSMUST00000227749	ENSMUSP00000154707	TRANSLATION	protein_coding	-	CCDS20213.1	-	296	0	0	1.5	180.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060699	Vmn1r35	ENSMUST00000227961	ENSMUSP00000153798	TRANSLATION	protein_coding	-	-	-	129	0	0	0	86.8	2	-1,-5	-	-	0.396	MINOR
ENSMUSG00000060699	Vmn1r35	ENSMUST00000227346	ENSMUSP00000153976	TRANSLATION	protein_coding	-	-	-	129	0	0	0	86.8	2	-1,-5	-	-	0.396	MINOR
ENSMUSG00000060699	Vmn1r35	ENSMUST00000227354	ENSMUSP00000153959	TRANSLATION	protein_coding	-	CCDS20213.1	-	296	0	0	1.5	180.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060699	Vmn1r35	ENSMUST00000071414	ENSMUSP00000071362	TRANSLATION	protein_coding	-	CCDS20213.1	-	296	0	0	1.5	180.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051331	Cacna1c	ENSMUST00000219223	ENSMUSP00000151391	TRANSLATION	protein_coding	start	-	5	1969	0	33.87	0	1197.1	51	-2,-5	-	-	-1	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000187386	ENSMUSP00000140341	TRANSLATION	protein_coding	-	-	5	2135	0	35.779	0	1231.9	50	-4,-6	-	-	7.752	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000239204	ENSMUSP00000159252	TRANSLATION	protein_coding	-	-	-	255	0	1.6	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000191196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051331	Cacna1c	ENSMUST00000188865	ENSMUSP00000139981	TRANSLATION	protein_coding	-	-	5	2139	0	35.734	1.7	1232.9	50	-4,-5	-	-	7.963	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000188181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051331	Cacna1c	ENSMUST00000078320	ENSMUSP00000077433	TRANSLATION	protein_coding	-	CCDS80590.1	1	2139	0	35.734	1.7	1237.1	51	-4,-5	-	-	8.215	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000189930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051331	Cacna1c	ENSMUST00000112825	ENSMUSP00000108444	TRANSLATION	protein_coding	-	CCDS71821.1	1	1869	0	30.835	0.5	1064.6	45	-1,-5	-	-	0	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000189057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051331	Cacna1c	ENSMUST00000189389	ENSMUSP00000139855	TRANSLATION	protein_coding	-	-	5	2167	0	36.484	1.2	1254.2	50	-4,-5	-	-	10.569	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000187940	ENSMUSP00000141033	TRANSLATION	protein_coding	-	CCDS80593.1	1	2169	0	35.734	3.9	1226.4	51	-4,-7	-	-	8.332	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000220022	ENSMUSP00000151458	TRANSLATION	protein_coding	start	-	5	2063	0	34.259	0	1199.8	50	-2,-5	-	-	-1	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000186889	ENSMUSP00000140056	TRANSLATION	protein_coding	-	CCDS80592.1	1	2169	0	35.734	3.9	1237.1	51	-4,-7	-	-	8.974	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000188106	ENSMUSP00000140886	TRANSLATION	protein_coding	-	CCDS80588.1	1	2153	0	35.515	0.5	1240.4	50	-4,-5	-	-	7.734	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000189520	ENSMUSP00000140220	TRANSLATION	protein_coding	-	-	5	2156	0	36.22	1.2	1253.1	50	-4,-5	-	-	9.975	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000112793	ENSMUSP00000108413	TRANSLATION	protein_coding	-	CCDS80587.1	1	2222	0	35.859	0.5	1228.9	50	-4,-5	-	-	7.734	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000187849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051331	Cacna1c	ENSMUST00000188078	ENSMUSP00000140415	TRANSLATION	protein_coding	-	-	5	2139	0	35.734	1.7	1242.6	50	-4,-5	-	-	8.545	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000188522	ENSMUSP00000140920	TRANSLATION	protein_coding	-	-	5	2164	0	35.779	2.2	1231.9	50	-4,-5	-	-	8.166	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000185345	ENSMUSP00000140833	TRANSLATION	protein_coding	-	-	5	2159	0	36.484	1.2	1215.2	50	-4,-5	-	-	8.229	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000190285	ENSMUSP00000141015	TRANSLATION	protein_coding	-	CCDS80595.1	1	2194	0	35.779	2.9	1236.1	51	-4,-7	-	-	8.659	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000187317	ENSMUSP00000140693	TRANSLATION	protein_coding	-	-	5	2187	0	37.234	1.2	1237.5	50	-4,-5	-	-	11.067	PRINCIPAL:1
ENSMUSG00000051331	Cacna1c	ENSMUST00000219833	ENSMUSP00000151462	TRANSLATION	protein_coding	start	-	5	2005	0	34.179	0	1207.2	51	-2,-5	-	-	-1	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000112790	ENSMUSP00000108410	TRANSLATION	protein_coding	-	CCDS80589.1	1	2139	0	35.734	1.7	1227.4	51	-4,-5	-	-	7.633	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000219018	ENSMUSP00000151863	TRANSLATION	protein_coding	start	-	5	1980	0	34.134	0	1208.2	51	-2,-5	-	-	-1	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000075591	ENSMUSP00000075021	TRANSLATION	protein_coding	-	CCDS80590.1	1	2139	0	35.734	1.7	1237.1	51	-4,-5	-	-	8.215	MINOR
ENSMUSG00000051331	Cacna1c	ENSMUST00000187474	ENSMUSP00000140961	TRANSLATION	protein_coding	-	CCDS80594.1	1	2169	0	35.734	3.9	1236.1	51	-4,-7	-	-	8.914	MINOR
ENSMUSG00000053007	Creb5	ENSMUST00000204748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000205222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053007	Creb5	ENSMUST00000203641	ENSMUSP00000144925	TRANSLATION	protein_coding	stop	-	5	55	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000053007	Creb5	ENSMUST00000204143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000204861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000204136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000205200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000211679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000203487	ENSMUSP00000144851	TRANSLATION	protein_coding	-	-	5	508	4	3.3	5.1	48.2	0	-4,-5	-	-	17.452	MINOR
ENSMUSG00000053007	Creb5	ENSMUST00000203575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053007	Creb5	ENSMUST00000204096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053007	Creb5	ENSMUST00000203528	ENSMUSP00000144979	TRANSLATION	protein_coding	-	CCDS85049.1	5	501	4	3.3	12.3	48.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000053007	Creb5	ENSMUST00000204245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053007	Creb5	ENSMUST00000047450	ENSMUSP00000038532	TRANSLATION	protein_coding	-	CCDS85049.1	5	501	4	3.3	12.3	48.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000053007	Creb5	ENSMUST00000205120	ENSMUSP00000144719	TRANSLATION	protein_coding	-	CCDS20153.1	1	357	0	1.8	0.5	48.2	0	-3,0	-	-	9	MINOR
ENSMUSG00000068259	Olfr461	ENSMUST00000215009	ENSMUSP00000150632	TRANSLATION	protein_coding	-	CCDS20034.1	5	313	0	0.28	7.5	140.7	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000068259	Olfr461	ENSMUST00000215125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068259	Olfr461	ENSMUST00000089490	ENSMUSP00000086917	TRANSLATION	protein_coding	-	CCDS20034.1	-	313	0	0.28	7.5	140.7	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000068259	Olfr461	ENSMUST00000216766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029671	Wnt16	ENSMUST00000176681	ENSMUSP00000135598	TRANSLATION	protein_coding	start/stop	-	5	76	0	0.5	0	44.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029671	Wnt16	ENSMUST00000128245	ENSMUSP00000134822	TRANSLATION	protein_coding	-	-	1	225	0	1.2	0	177.4	0	0,-3	-	-	2.964	MINOR
ENSMUSG00000029671	Wnt16	ENSMUST00000031681	ENSMUSP00000031681	TRANSLATION	protein_coding	-	CCDS19936.1	1	364	0	2.43	2.7	399.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000029671	Wnt16	ENSMUST00000148639	ENSMUSP00000135016	TRANSLATION	protein_coding	-	-	1	225	0	1.3	0.5	175.6	0	0,-3	-	-	3.21	MINOR
ENSMUSG00000048636	A730049H05Rik	ENSMUST00000057977	ENSMUSP00000051623	TRANSLATION	protein_coding	-	-	1	139	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000048636	A730049H05Rik	ENSMUST00000133858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044156	Hepacam2	ENSMUST00000201276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044156	Hepacam2	ENSMUST00000201607	ENSMUSP00000143834	TRANSLATION	protein_coding	stop	-	5	206	0	1.93	0	54.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044156	Hepacam2	ENSMUST00000200972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044156	Hepacam2	ENSMUST00000049985	ENSMUSP00000058882	TRANSLATION	protein_coding	-	CCDS39414.1	1	463	0	2.81	3.9	54.6	0	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000044156	Hepacam2	ENSMUST00000200854	ENSMUSP00000144362	TRANSLATION	protein_coding	stop	-	3	153	0	1.24	0	54.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018656	Tcaf3	ENSMUST00000151898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018656	Tcaf3	ENSMUST00000069023	ENSMUSP00000064060	TRANSLATION	protein_coding	-	CCDS20074.1	1	914	2	1.98	1.5	261	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000018656	Tcaf3	ENSMUST00000134707	ENSMUSP00000123321	TRANSLATION	protein_coding	stop	-	5	222	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076494	Trbj2-3	ENSMUST00000103295	ENSMUSP00000141968	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030200	Bcl2l14	ENSMUST00000127865	ENSMUSP00000115608	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030200	Bcl2l14	ENSMUST00000032321	ENSMUSP00000032321	TRANSLATION	protein_coding	-	CCDS20636.1	1	328	0	0.78	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030200	Bcl2l14	ENSMUST00000142612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030200	Bcl2l14	ENSMUST00000111960	ENSMUSP00000107591	TRANSLATION	protein_coding	-	CCDS20636.1	1	328	0	0.78	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030200	Bcl2l14	ENSMUST00000139183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030200	Bcl2l14	ENSMUST00000163589	ENSMUSP00000132525	TRANSLATION	protein_coding	-	CCDS20636.1	5	328	0	0.78	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079516	Reg3a	ENSMUST00000101272	ENSMUSP00000098829	TRANSLATION	protein_coding	-	CCDS20255.1	1	175	3	3.75	2.7	75.2	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000070736	ENSMUSP00000063784	TRANSLATION	protein_coding	-	CCDS20167.1	1	496	0	7.33	1.7	407.2	12	4,-1	-	-	9.702	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000167484	ENSMUSP00000131641	TRANSLATION	protein_coding	stop	-	2	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000167234	ENSMUSP00000126994	TRANSLATION	protein_coding	-	-	5	524	0	6.955	1.7	408.2	12	4,-1	-	-	9.012	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000172084	ENSMUSP00000127319	TRANSLATION	protein_coding	-	-	5	447	0	8.12	0.5	419.2	12	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000166962	ENSMUSP00000130742	TRANSLATION	protein_coding	stop	-	5	146	0	2	0	58.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000165786	ENSMUSP00000130923	TRANSLATION	protein_coding	-	-	5	495	0	7.33	1.7	407.2	12	4,-1	-	-	9.702	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000070756	ENSMUSP00000066902	TRANSLATION	protein_coding	-	CCDS20166.1	1	468	0	7.705	1.7	416.4	12	4,-1	-	-	11.004	MINOR
ENSMUSG00000029778	Adcyap1r1	ENSMUST00000165857	ENSMUSP00000129614	TRANSLATION	protein_coding	-	-	5	496	0	7.33	1.2	415.1	12	4,-1	-	-	10.176	MINOR
ENSMUSG00000029707	Fscn3	ENSMUST00000147036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029707	Fscn3	ENSMUST00000031719	ENSMUSP00000031719	TRANSLATION	protein_coding	-	CCDS39446.1	1	498	0	3.8	7.5	176.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029832	Nfe2l3	ENSMUST00000061507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029832	Nfe2l3	ENSMUST00000160133	ENSMUSP00000124920	TRANSLATION	protein_coding	-	-	1	264	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000029832	Nfe2l3	ENSMUST00000005103	ENSMUSP00000005103	TRANSLATION	protein_coding	-	CCDS20134.1	1	660	0	0.2	0.5	62.2	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000051499	Zfp786	ENSMUST00000143979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051499	Zfp786	ENSMUST00000058844	ENSMUSP00000057495	TRANSLATION	protein_coding	-	CCDS20098.1	1	777	50	0.2	0.5	281.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051499	Zfp786	ENSMUST00000204984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076497	Trbj2-7	ENSMUST00000103298	ENSMUSP00000141994	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076556	Igkv4-57	ENSMUST00000103357	ENSMUSP00000100158	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	59.8	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000037621	Atoh8	ENSMUST00000042646	ENSMUSP00000036981	TRANSLATION	protein_coding	-	CCDS39511.1	1	322	0	1.5	1.5	53.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037621	Atoh8	ENSMUST00000206425	ENSMUSP00000145790	TRANSLATION	nonsense_mediated_decay	start	-	1	114	0	0.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037621	Atoh8	ENSMUST00000206553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029776	Hibadh	ENSMUST00000203504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029776	Hibadh	ENSMUST00000031788	ENSMUSP00000031788	TRANSLATION	protein_coding	-	CCDS20151.1	1	335	16	6.75	7.6	167	0	0,4	-	-	21	PRINCIPAL:1
ENSMUSG00000029776	Hibadh	ENSMUST00000205086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029776	Hibadh	ENSMUST00000149471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029776	Hibadh	ENSMUST00000155948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052763	Zfp212	ENSMUST00000009411	ENSMUSP00000009411	TRANSLATION	protein_coding	-	CCDS51761.1	1	492	16	0.6	1.5	166.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000052763	Zfp212	ENSMUST00000156500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076463	Trbv3	ENSMUST00000103264	ENSMUSP00000100080	TRANSLATION	TR_V_gene	stop	-	-	117	0	1.2	0	57.9	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000038641	Akr1d1	ENSMUST00000123648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038641	Akr1d1	ENSMUST00000040987	ENSMUSP00000048830	TRANSLATION	protein_coding	-	CCDS20007.1	1	325	28	8	4.7	160.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000044248	Vmn1r45	ENSMUST00000054202	ENSMUSP00000052123	TRANSLATION	protein_coding	-	CCDS39559.1	1	318	0	0	0.5	445.5	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044248	Vmn1r45	ENSMUST00000227122	ENSMUSP00000154196	TRANSLATION	protein_coding	-	-	-	198	0	0	0	342.4	5	-4,-2	-	-	0	MINOR
ENSMUSG00000044248	Vmn1r45	ENSMUST00000227977	ENSMUSP00000154708	TRANSLATION	protein_coding	-	CCDS39559.1	-	318	0	0	0.5	445.5	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044248	Vmn1r45	ENSMUST00000228492	ENSMUSP00000154781	TRANSLATION	protein_coding	-	-	-	198	0	0	0	342.4	5	-4,-2	-	-	0	MINOR
ENSMUSG00000044248	Vmn1r45	ENSMUST00000227571	ENSMUSP00000153977	TRANSLATION	protein_coding	-	-	-	198	0	0	0	342.4	5	-4,-2	-	-	0	MINOR
ENSMUSG00000044248	Vmn1r45	ENSMUST00000228662	ENSMUSP00000154795	TRANSLATION	protein_coding	-	CCDS39559.1	-	318	0	0	0.5	445.5	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044248	Vmn1r45	ENSMUST00000226167	ENSMUSP00000154647	TRANSLATION	protein_coding	-	-	-	198	0	0	0	342.4	5	-4,-2	-	-	0	MINOR
ENSMUSG00000044248	Vmn1r45	ENSMUST00000227426	ENSMUSP00000153735	TRANSLATION	protein_coding	-	CCDS39559.1	-	318	0	0	0.5	445.5	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038203	Hoxa13	ENSMUST00000147595	ENSMUSP00000125221	TRANSLATION	protein_coding	-	-	5	296	0	1	0	141.6	0	-2,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000038203	Hoxa13	ENSMUST00000114416	ENSMUSP00000110059	TRANSLATION	protein_coding	-	-	1	219	0	1	0	115.6	0	-4,-7	-	-	10.44	MINOR
ENSMUSG00000038203	Hoxa13	ENSMUST00000173368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038203	Hoxa13	ENSMUST00000047993	ENSMUSP00000039170	TRANSLATION	protein_coding	-	-	5	383	0	1	1.5	141.6	0	-4,-7	-	-	12	PRINCIPAL:5
ENSMUSG00000038203	Hoxa13	ENSMUST00000174763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038203	Hoxa13	ENSMUST00000172961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030131	Mug2	ENSMUST00000081777	ENSMUSP00000080469	TRANSLATION	protein_coding	-	CCDS39619.1	1	1451	2	26.695	0.5	555.3	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000058440	Nrf1	ENSMUST00000115199	ENSMUSP00000110853	TRANSLATION	protein_coding	-	CCDS51739.1	1	531	0	0.06	0.5	387.4	0	-4,-5	-	-	0.174	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000133928	ENSMUSP00000117868	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000069808	ENSMUSP00000065568	TRANSLATION	protein_coding	-	CCDS51741.1	5	534	0	2.06	1.5	493.4	0	-4,-5	-	-	12.152	PRINCIPAL:1
ENSMUSG00000058440	Nrf1	ENSMUST00000115212	ENSMUSP00000110867	TRANSLATION	protein_coding	-	CCDS19968.1	1	503	0	0.06	14.1	407.2	0	-4,-5	-	-	5.002	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000069831	ENSMUSP00000067447	TRANSLATION	protein_coding	-	CCDS51739.1	5	531	0	0.06	0.5	387.4	0	-4,-5	-	-	0.174	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000130096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058440	Nrf1	ENSMUST00000115209	ENSMUSP00000110864	TRANSLATION	protein_coding	-	CCDS19968.1	5	503	0	0.06	14.1	407.2	0	-4,-5	-	-	5.002	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000167972	ENSMUSP00000130108	TRANSLATION	protein_coding	-	CCDS19968.1	5	503	0	0.06	14.1	407.2	0	-4,-5	-	-	5.002	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000004761	ENSMUSP00000004761	TRANSLATION	protein_coding	-	CCDS51740.1	5	519	0	0.06	0.5	387.4	0	-4,-5	-	-	0.174	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000132866	ENSMUSP00000114451	TRANSLATION	protein_coding	start	-	2	218	0	0.06	0	26.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000133837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058440	Nrf1	ENSMUST00000146988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058440	Nrf1	ENSMUST00000148990	ENSMUSP00000143957	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000115206	ENSMUSP00000110860	TRANSLATION	protein_coding	-	CCDS51741.1	1	534	0	2.06	1.5	493.4	0	-4,-5	-	-	12.152	PRINCIPAL:1
ENSMUSG00000058440	Nrf1	ENSMUST00000123194	ENSMUSP00000114650	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	153.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000115204	ENSMUSP00000110858	TRANSLATION	protein_coding	-	CCDS51742.1	1	449	0	0	0.5	387.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000170535	ENSMUSP00000132637	TRANSLATION	protein_coding	-	CCDS51742.1	5	449	0	0	0.5	387.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000115208	ENSMUSP00000110863	TRANSLATION	protein_coding	-	-	5	474	0	0.06	0	387.4	0	-4,-5	-	-	0.174	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000115211	ENSMUSP00000110866	TRANSLATION	protein_coding	-	CCDS19968.1	1	503	0	0.06	14.1	407.2	0	-4,-5	-	-	5.002	MINOR
ENSMUSG00000058440	Nrf1	ENSMUST00000115200	ENSMUSP00000110854	TRANSLATION	protein_coding	-	CCDS51740.1	1	519	0	0.06	0.5	387.4	0	-4,-5	-	-	0.174	MINOR
ENSMUSG00000107874	Prpmp5	ENSMUST00000048686	ENSMUSP00000047347	TRANSLATION	protein_coding	-	CCDS39672.1	1	296	0	0	0.5	151.1	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000053044	Cd8b1	ENSMUST00000065248	ENSMUSP00000070131	TRANSLATION	protein_coding	-	CCDS39506.1	1	213	0	2.3	0.5	64.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030224	Strap	ENSMUST00000064910	ENSMUSP00000068267	TRANSLATION	protein_coding	-	CCDS51945.1	1	350	0	4.9	10.8	93.5	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030224	Strap	ENSMUST00000154698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030224	Strap	ENSMUST00000137235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063870	Chd4	ENSMUST00000155932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063870	Chd4	ENSMUST00000138968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063870	Chd4	ENSMUST00000155261	ENSMUSP00000122806	TRANSLATION	protein_coding	stop	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063870	Chd4	ENSMUST00000112392	ENSMUSP00000108011	TRANSLATION	protein_coding	-	-	5	1902	7	17.41	0.5	1085.3	0	-4,-5	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000063870	Chd4	ENSMUST00000124317	ENSMUSP00000120704	TRANSLATION	protein_coding	start/stop	-	5	444	0	1.73	0	300.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063870	Chd4	ENSMUST00000112390	ENSMUSP00000108009	TRANSLATION	protein_coding	-	-	5	1922	7	17.81	0.5	1085.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000063870	Chd4	ENSMUST00000056889	ENSMUSP00000060054	TRANSLATION	protein_coding	-	CCDS20543.1	1	1915	7	17.81	0.5	1085.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000063870	Chd4	ENSMUST00000132794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071521	Try10	ENSMUST00000072103	ENSMUSP00000071976	TRANSLATION	protein_coding	-	CCDS20046.1	1	246	22	4.5	6.4	270.9	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000094192	Olfr452	ENSMUST00000214465	ENSMUSP00000149932	TRANSLATION	protein_coding	-	CCDS20079.1	5	317	0	0.42	8.8	176.3	4	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094192	Olfr452	ENSMUST00000215719	ENSMUSP00000149548	TRANSLATION	protein_coding	-	CCDS20079.1	5	317	0	0.42	8.8	176.3	4	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094192	Olfr452	ENSMUST00000217701	ENSMUSP00000151882	TRANSLATION	protein_coding	-	CCDS20079.1	5	317	0	0.42	8.8	176.3	4	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094192	Olfr452	ENSMUST00000075468	ENSMUSP00000074914	TRANSLATION	protein_coding	-	CCDS20079.1	-	317	0	0.42	8.8	176.3	4	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000029831	Npvf	ENSMUST00000031853	ENSMUSP00000031853	TRANSLATION	protein_coding	-	CCDS20133.1	1	188	0	0	0.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000033027	Klrc3	ENSMUST00000170148	ENSMUSP00000129830	TRANSLATION	protein_coding	-	-	1	213	3	2.4	0.5	48	2	-4,-5	-	-	14.406	ALTERNATIVE:2
ENSMUSG00000033027	Klrc3	ENSMUST00000203189	ENSMUSP00000144993	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000033027	Klrc3	ENSMUST00000071149	ENSMUSP00000071147	TRANSLATION	protein_coding	-	CCDS20591.1	1	221	3	2.664	0.5	48	2	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000042742	Bmt2	ENSMUST00000045235	ENSMUSP00000040578	TRANSLATION	protein_coding	-	CCDS51723.1	1	403	0	0	3.9	0	0	-4,-7	-	-	1	PRINCIPAL:2
ENSMUSG00000042742	Bmt2	ENSMUST00000203078	ENSMUSP00000144704	TRANSLATION	protein_coding	-	-	1	204	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000054497	Tas2r130	ENSMUST00000067597	ENSMUSP00000063954	TRANSLATION	protein_coding	-	CCDS20608.1	-	312	0	0	2.7	362.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030310	Slc6a1	ENSMUST00000203100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030310	Slc6a1	ENSMUST00000204540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030310	Slc6a1	ENSMUST00000204278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030310	Slc6a1	ENSMUST00000203330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030310	Slc6a1	ENSMUST00000204074	ENSMUSP00000145080	TRANSLATION	protein_coding	-	-	5	415	0	8.73	0	542.1	9	-4,-7	-	-	0	MINOR
ENSMUSG00000030310	Slc6a1	ENSMUST00000032454	ENSMUSP00000032454	TRANSLATION	protein_coding	-	CCDS20434.1	1	599	0	12.055	12.8	773.3	11	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030310	Slc6a1	ENSMUST00000204600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052852	Reep1	ENSMUST00000212792	ENSMUSP00000148341	TRANSLATION	protein_coding	-	-	5	284	0	0	0	91.8	3	0,-4	-	-	6	MINOR
ENSMUSG00000052852	Reep1	ENSMUST00000121469	ENSMUSP00000112662	TRANSLATION	protein_coding	-	CCDS51807.1	1	201	0	0	5.1	91.8	3	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000052852	Reep1	ENSMUST00000212631	ENSMUSP00000148678	TRANSLATION	protein_coding	-	-	5	143	0	0	0	42.6	3	0,-5	-	-	2.784	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000204823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000203891	ENSMUSP00000144939	TRANSLATION	protein_coding	-	-	5	1239	4	2.79	0	0	0	-4,0	-	-	10	ALTERNATIVE:2
ENSMUSG00000030016	Zfp638	ENSMUST00000113836	ENSMUSP00000109467	TRANSLATION	protein_coding	-	-	5	1275	4	2.79	0	0	0	-4,0	-	-	10	ALTERNATIVE:2
ENSMUSG00000030016	Zfp638	ENSMUST00000203324	ENSMUSP00000145124	TRANSLATION	protein_coding	-	-	5	1273	4	2.79	0	0	0	-4,0	-	-	10	ALTERNATIVE:2
ENSMUSG00000030016	Zfp638	ENSMUST00000203455	ENSMUSP00000145047	TRANSLATION	protein_coding	stop	-	5	891	4	2.15	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000204713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000204580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000203534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000203481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000204378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000203273	ENSMUSP00000145241	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000204120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000203806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030016	Zfp638	ENSMUST00000204751	ENSMUSP00000144989	TRANSLATION	protein_coding	-	CCDS20288.1	1	1926	4	2.79	0.5	0	0	-4,0	-	-	10	PRINCIPAL:3
ENSMUSG00000030016	Zfp638	ENSMUST00000205166	ENSMUSP00000144762	TRANSLATION	protein_coding	start/stop	-	3	266	0	1.74	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000032088	ENSMUSP00000032088	TRANSLATION	protein_coding	-	-	5	1960	4	2.79	0.5	0	0	-4,0	-	-	10	ALTERNATIVE:2
ENSMUSG00000030016	Zfp638	ENSMUST00000204415	ENSMUSP00000145513	TRANSLATION	protein_coding	stop	-	2	185	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000113835	ENSMUSP00000109466	TRANSLATION	protein_coding	-	CCDS51823.1	1	1271	4	2.79	0.5	0	0	-4,0	-	-	10	ALTERNATIVE:2
ENSMUSG00000030016	Zfp638	ENSMUST00000204202	ENSMUSP00000145170	TRANSLATION	protein_coding	stop	-	1	832	4	1.35	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030016	Zfp638	ENSMUST00000204110	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030016	Zfp638	ENSMUST00000203808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030016	Zfp638	ENSMUST00000203056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030244	Gys2	ENSMUST00000126939	ENSMUSP00000145213	TRANSLATION	protein_coding	start	-	2	34	0	0.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030244	Gys2	ENSMUST00000032371	ENSMUSP00000032371	TRANSLATION	protein_coding	-	CCDS20683.1	1	704	28	13.19	3.9	1212.2	0	-1,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000053251	Olfr212	ENSMUST00000220134	ENSMUSP00000151524	TRANSLATION	protein_coding	-	CCDS20454.1	5	327	0	0.36	1.5	148.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053251	Olfr212	ENSMUST00000075756	ENSMUSP00000075164	TRANSLATION	protein_coding	-	CCDS20454.1	1	327	0	0.36	1.5	148.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053251	Olfr212	ENSMUST00000218028	ENSMUSP00000151377	TRANSLATION	protein_coding	-	CCDS20454.1	5	327	0	0.36	1.5	148.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036371	Serbp1	ENSMUST00000204034	ENSMUSP00000144941	TRANSLATION	protein_coding	start/stop	-	3	186	0	0	0	108.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000204135	ENSMUSP00000145142	TRANSLATION	nonsense_mediated_decay	start	-	3	75	0	0	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000205091	ENSMUSP00000144772	TRANSLATION	nonsense_mediated_decay	-	-	1	147	0	0	0	126.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000042990	ENSMUSP00000039110	TRANSLATION	protein_coding	-	CCDS20219.1	1	407	0	0	5.1	232.9	0	-4,-5	-	-	7.124	PRINCIPAL:3
ENSMUSG00000036371	Serbp1	ENSMUST00000203054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036371	Serbp1	ENSMUST00000204944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036371	Serbp1	ENSMUST00000203077	ENSMUSP00000144913	TRANSLATION	protein_coding	-	CCDS85060.1	1	392	0	0	5.1	224.2	0	-4,-5	-	-	6.602	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000204293	ENSMUSP00000145472	TRANSLATION	protein_coding	-	CCDS85062.1	1	386	0	0	5.1	239.3	0	-4,-5	-	-	7.508	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000204206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036371	Serbp1	ENSMUST00000203436	ENSMUSP00000144713	TRANSLATION	protein_coding	-	CCDS85061.1	1	401	0	0	5.1	247.5	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000036371	Serbp1	ENSMUST00000204294	ENSMUSP00000145517	TRANSLATION	protein_coding	-	-	5	211	0	0	0	133.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000203167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036371	Serbp1	ENSMUST00000205106	ENSMUSP00000144933	TRANSLATION	protein_coding	-	-	5	362	0	0	0	178.4	0	-4,-5	-	-	1.854	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000203233	ENSMUSP00000144754	TRANSLATION	nonsense_mediated_decay	-	-	5	155	0	0	0	126.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036371	Serbp1	ENSMUST00000203402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036371	Serbp1	ENSMUST00000204810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049694	BC048671	ENSMUST00000167550	ENSMUSP00000132052	TRANSLATION	protein_coding	-	CCDS20357.1	1	137	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000049694	BC048671	ENSMUST00000054799	ENSMUSP00000058483	TRANSLATION	protein_coding	-	CCDS20357.1	1	137	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000076487	Trbj1-5	ENSMUST00000103288	ENSMUSP00000141795	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030327	Necap1	ENSMUST00000203476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030327	Necap1	ENSMUST00000032477	ENSMUSP00000032477	TRANSLATION	protein_coding	-	CCDS20505.1	1	275	0	3.95	7.5	189.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030327	Necap1	ENSMUST00000203394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030327	Necap1	ENSMUST00000203715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030094	Xpc	ENSMUST00000206476	ENSMUSP00000145683	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030094	Xpc	ENSMUST00000150279	ENSMUSP00000145777	TRANSLATION	nonsense_mediated_decay	start	-	2	697	0	0.74	0	134.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030094	Xpc	ENSMUST00000032182	ENSMUSP00000032182	TRANSLATION	protein_coding	-	CCDS39569.1	1	930	0	2.69	1.5	282.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000076605	Igkj2	ENSMUST00000198234	ENSMUSP00000142356	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076605	Igkj2	ENSMUST00000103406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005667	Mthfd2	ENSMUST00000141193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005667	Mthfd2	ENSMUST00000139802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005667	Mthfd2	ENSMUST00000141044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005667	Mthfd2	ENSMUST00000005810	ENSMUSP00000005810	TRANSLATION	protein_coding	-	CCDS20277.1	1	350	22	7.5	6.3	349.9	0	1,4	-	-	20	PRINCIPAL:1
ENSMUSG00000005667	Mthfd2	ENSMUST00000203847	ENSMUSP00000145266	TRANSLATION	nonsense_mediated_decay	-	-	5	123	1	1	0	50.4	0	1,4	-	-	-1	MINOR
ENSMUSG00000005667	Mthfd2	ENSMUST00000204472	ENSMUSP00000145222	TRANSLATION	protein_coding	stop	-	3	97	1	1.75	0	72.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005667	Mthfd2	ENSMUST00000203375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095682	Igkv3-1	ENSMUST00000103404	ENSMUSP00000100205	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	67.4	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000042992	Borcs5	ENSMUST00000203234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042992	Borcs5	ENSMUST00000204133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042992	Borcs5	ENSMUST00000203163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042992	Borcs5	ENSMUST00000062755	ENSMUSP00000054913	TRANSLATION	protein_coding	-	CCDS20638.1	1	195	0	0	15.8	198	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000042992	Borcs5	ENSMUST00000166591	ENSMUSP00000127413	TRANSLATION	protein_coding	-	CCDS51936.1	2	196	0	0	0.5	198	0	-4,-2	-	-	6	MINOR
ENSMUSG00000041460	Cacna2d4	ENSMUST00000190015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041460	Cacna2d4	ENSMUST00000191331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041460	Cacna2d4	ENSMUST00000187222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041460	Cacna2d4	ENSMUST00000037434	ENSMUSP00000044660	TRANSLATION	protein_coding	-	CCDS51886.1	2	1144	4	14.673	1.5	304.8	0	-4,0	-	-	16	PRINCIPAL:2
ENSMUSG00000041460	Cacna2d4	ENSMUST00000188239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041460	Cacna2d4	ENSMUST00000186622	ENSMUSP00000140197	TRANSLATION	protein_coding	-	-	1	1091	4	13.923	0	304.8	0	-1,1	-	-	14.5	MINOR
ENSMUSG00000041460	Cacna2d4	ENSMUST00000186702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041460	Cacna2d4	ENSMUST00000185965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041460	Cacna2d4	ENSMUST00000186176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041460	Cacna2d4	ENSMUST00000186203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041460	Cacna2d4	ENSMUST00000238905	ENSMUSP00000158949	TRANSLATION	protein_coding	-	-	-	1116	4	14.673	0	304.8	0	-1,1	-	-	16	ALTERNATIVE:2
ENSMUSG00000094797	Igkv6-15	ENSMUST00000103393	ENSMUSP00000100194	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	56.7	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000001156	Mxd1	ENSMUST00000001184	ENSMUSP00000001184	TRANSLATION	protein_coding	-	CCDS51835.1	1	227	0	2.33	0.5	43.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001156	Mxd1	ENSMUST00000203946	ENSMUSP00000145081	TRANSLATION	protein_coding	start	-	5	121	0	2.33	0	43.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001156	Mxd1	ENSMUST00000204437	ENSMUSP00000145396	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001156	Mxd1	ENSMUST00000205076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107872	Gm44511	ENSMUST00000204756	ENSMUSP00000144777	TRANSLATION	protein_coding,RT	start/stop	-	1	188	0	3.08	0	56.3	2	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000107872	Gm44511	ENSMUST00000204423	ENSMUSP00000145327	TRANSLATION	protein_coding,RT	-	-	1	223	0	3.5	1.5	72.2	2	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000107872	Gm44511	ENSMUST00000204394	ENSMUSP00000145481	TRANSLATION	protein_coding,RT	-	-	1	223	0	3.83	1.5	70.8	2	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000107872	Gm44511	ENSMUST00000204677	ENSMUSP00000145287	TRANSLATION	protein_coding,RT	stop	-	5	143	0	1	0	0	2	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000058706	0610030E20Rik	ENSMUST00000205578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058706	0610030E20Rik	ENSMUST00000077783	ENSMUSP00000076957	TRANSLATION	protein_coding	-	CCDS51808.1	1	166	0	0	5.1	220.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000058706	0610030E20Rik	ENSMUST00000205472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058706	0610030E20Rik	ENSMUST00000204152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030272	Camk1	ENSMUST00000155543	ENSMUSP00000117749	TRANSLATION	protein_coding	stop	-	5	162	12	4.25	0	153.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030272	Camk1	ENSMUST00000153067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030272	Camk1	ENSMUST00000032409	ENSMUSP00000032409	TRANSLATION	protein_coding	-	CCDS20415.1	1	374	20	8.75	1.5	261.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030272	Camk1	ENSMUST00000149497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030272	Camk1	ENSMUST00000156853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030272	Camk1	ENSMUST00000156512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095486	Vmn2r22	ENSMUST00000232854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095486	Vmn2r22	ENSMUST00000170808	ENSMUSP00000132043	TRANSLATION	protein_coding	-	CCDS51900.1	5	853	5	3.1	0.5	389.3	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000030007	Cct7	ENSMUST00000205096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030007	Cct7	ENSMUST00000204612	ENSMUSP00000144701	TRANSLATION	protein_coding	start/stop	-	3	79	0	1.5	0	37.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030007	Cct7	ENSMUST00000032078	ENSMUSP00000032078	TRANSLATION	protein_coding	-	CCDS20295.1	1	544	24	11.25	6.9	537.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030007	Cct7	ENSMUST00000205094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030007	Cct7	ENSMUST00000204489	ENSMUSP00000144919	TRANSLATION	nonsense_mediated_decay	-	-	5	83	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030007	Cct7	ENSMUST00000204592	ENSMUSP00000144893	TRANSLATION	protein_coding	-	-	5	502	20	10	0	384.8	0	-4,-5	-	-	6.834	MINOR
ENSMUSG00000030007	Cct7	ENSMUST00000205143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094356	Igkv8-28	ENSMUST00000197525	ENSMUSP00000142628	TRANSLATION	IG_V_gene	stop	-	-	121	2	1.5	0	69.4	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094356	Igkv8-28	ENSMUST00000103380	ENSMUSP00000100181	TRANSLATION	IG_V_gene	start/stop	-	-	101	2	1	0	69.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000039215	Svs1	ENSMUST00000037696	ENSMUSP00000045221	TRANSLATION	protein_coding	-	CCDS20121.1	1	820	17	3.598	0.5	426.8	0	3,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043162	Pyurf	ENSMUST00000053386	ENSMUSP00000050958	TRANSLATION	protein_coding,RT	-	CCDS20184.1	1	112	0	1.2	2.7	31.4	0	-2,2	-	-	-1	PRINCIPAL:1
ENSMUSG00000029843	Slc13a4	ENSMUST00000031868	ENSMUSP00000031868	TRANSLATION	protein_coding	-	CCDS20000.1	1	625	0	2.26	3.9	343.7	0	-1,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000029843	Slc13a4	ENSMUST00000122829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029843	Slc13a4	ENSMUST00000155366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030345	Dyrk4	ENSMUST00000032495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030345	Dyrk4	ENSMUST00000171945	ENSMUSP00000128180	TRANSLATION	nonsense_mediated_decay	start	-	5	60	0	1.066	0	49.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030345	Dyrk4	ENSMUST00000078521	ENSMUSP00000077606	TRANSLATION	protein_coding	-	CCDS20559.2	1	632	18	7.81	0.5	185.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040163	1700034J05Rik	ENSMUST00000036592	ENSMUSP00000043802	TRANSLATION	protein_coding	-	CCDS51957.1	1	301	0	0	1.5	416.4	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000040163	1700034J05Rik	ENSMUST00000111622	ENSMUSP00000107249	TRANSLATION	protein_coding	-	CCDS51956.1	1	300	0	0	1.5	414.9	0	-4,-5	-	-	5.91	ALTERNATIVE:2
ENSMUSG00000029844	Hoxa1	ENSMUST00000120363	ENSMUSP00000113724	TRANSLATION	protein_coding	-	CCDS80534.1	1	138	0	0	5.1	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000029844	Hoxa1	ENSMUST00000000964	ENSMUSP00000000964	TRANSLATION	protein_coding	-	CCDS20138.1	1	336	0	1.74	1.7	76.1	0	-4,-5	-	-	12.342	PRINCIPAL:1
ENSMUSG00000038115	Ano2	ENSMUST00000160317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038115	Ano2	ENSMUST00000160496	ENSMUSP00000125303	TRANSLATION	protein_coding	-	CCDS39643.2	1	1002	0	2.9	1.5	793.8	4	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038115	Ano2	ENSMUST00000161293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038115	Ano2	ENSMUST00000161619	ENSMUSP00000125426	TRANSLATION	nonsense_mediated_decay	start	-	1	492	0	0.81	0	402.5	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000038115	Ano2	ENSMUST00000159984	ENSMUSP00000123965	TRANSLATION	nonsense_mediated_decay	start	-	5	188	0	0.51	0	140.7	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000038115	Ano2	ENSMUST00000159111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091260	Vmn2r19	ENSMUST00000073948	ENSMUSP00000073604	TRANSLATION	protein_coding	-	CCDS51897.1	5	854	5	3.26	0.5	380	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000004270	Lpcat3	ENSMUST00000004381	ENSMUSP00000004381	TRANSLATION	protein_coding	-	CCDS20523.1	1	487	0	0	3.9	266.4	8	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000004270	Lpcat3	ENSMUST00000133797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004270	Lpcat3	ENSMUST00000128721	ENSMUSP00000144738	TRANSLATION	nonsense_mediated_decay	-	-	3	99	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000004270	Lpcat3	ENSMUST00000130020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004270	Lpcat3	ENSMUST00000135516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004270	Lpcat3	ENSMUST00000141069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004270	Lpcat3	ENSMUST00000152176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004270	Lpcat3	ENSMUST00000150597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004270	Lpcat3	ENSMUST00000141546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078280	Tas2r122	ENSMUST00000105077	ENSMUSP00000100699	TRANSLATION	protein_coding	-	CCDS39675.1	-	309	0	0	0.5	240.2	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000059486	Kbtbd2	ENSMUST00000124994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059486	Kbtbd2	ENSMUST00000114321	ENSMUSP00000109960	TRANSLATION	protein_coding	-	CCDS51790.1	1	623	0	1.76	15	228.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000059486	Kbtbd2	ENSMUST00000151308	ENSMUSP00000122266	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059486	Kbtbd2	ENSMUST00000114323	ENSMUSP00000109962	TRANSLATION	protein_coding	-	CCDS51790.1	1	623	0	1.76	15	228.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000014550	Rbsn	ENSMUST00000204858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014550	Rbsn	ENSMUST00000014694	ENSMUSP00000014694	TRANSLATION	protein_coding	-	CCDS20374.1	1	783	10	2.43	1.5	391.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000014550	Rbsn	ENSMUST00000203516	ENSMUSP00000144945	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014550	Rbsn	ENSMUST00000124635	ENSMUSP00000144749	TRANSLATION	protein_coding	start	-	3	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014550	Rbsn	ENSMUST00000138041	ENSMUSP00000120883	TRANSLATION	protein_coding	stop	-	3	45	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014550	Rbsn	ENSMUST00000141332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041681	Iapp	ENSMUST00000041993	ENSMUSP00000043956	TRANSLATION	protein_coding	-	CCDS39694.1	1	93	0	1	1.5	56.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000041681	Iapp	ENSMUST00000141583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071341	Egr4	ENSMUST00000095759	ENSMUSP00000093433	TRANSLATION	protein_coding	-	CCDS20297.1	1	478	12	0.4	1.5	54.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030105	Arl8b	ENSMUST00000032196	ENSMUSP00000032196	TRANSLATION	protein_coding	-	CCDS39586.1	1	186	17	5.83	18.2	159.7	0	-3,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000030105	Arl8b	ENSMUST00000204483	ENSMUSP00000145035	TRANSLATION	protein_coding	-	-	3	138	10	4.5	0	134	0	-4,-6	-	-	9.132	MINOR
ENSMUSG00000030062	Rpn1	ENSMUST00000204024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030062	Rpn1	ENSMUST00000203813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030062	Rpn1	ENSMUST00000204164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030062	Rpn1	ENSMUST00000204838	ENSMUSP00000144711	TRANSLATION	nonsense_mediated_decay	start	-	5	90	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000030062	Rpn1	ENSMUST00000032143	ENSMUSP00000032143	TRANSLATION	protein_coding	-	CCDS20332.1	1	608	0	0	5.3	483.7	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030149	Klrk1	ENSMUST00000168919	ENSMUSP00000130398	TRANSLATION	protein_coding	-	CCDS71846.1	1	225	2	3.5	0.5	67	3	-4,-5	-	-	14	ALTERNATIVE:2
ENSMUSG00000030149	Klrk1	ENSMUST00000137660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030149	Klrk1	ENSMUST00000095412	ENSMUSP00000093061	TRANSLATION	protein_coding	-	CCDS39661.1	1	219	2	3.5	0.5	67	3	-4,-6	-	-	14	ALTERNATIVE:2
ENSMUSG00000030149	Klrk1	ENSMUST00000032252	ENSMUSP00000032252	TRANSLATION	protein_coding	-	CCDS39660.1	1	232	2	3.5	0.5	67	3	-4,-6	-	-	14	PRINCIPAL:4
ENSMUSG00000030149	Klrk1	ENSMUST00000204694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030149	Klrk1	ENSMUST00000152256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033216	Eefsec	ENSMUST00000204459	ENSMUSP00000144824	TRANSLATION	protein_coding	stop	-	3	266	14	4.43	0	93.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033216	Eefsec	ENSMUST00000165242	ENSMUSP00000131207	TRANSLATION	protein_coding	-	CCDS20335.1	1	583	14	9.18	1.5	123.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033216	Eefsec	ENSMUST00000205014	ENSMUSP00000145448	TRANSLATION	nonsense_mediated_decay	-	-	3	125	7	0.6	0	43.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033216	Eefsec	ENSMUST00000203886	ENSMUSP00000145017	TRANSLATION	protein_coding	stop	-	2	254	7	4	0	60.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033216	Eefsec	ENSMUST00000205179	ENSMUSP00000144839	TRANSLATION	protein_coding	-	-	1	534	14	7.43	0	123.1	0	-4,-2	-	-	14.502	MINOR
ENSMUSG00000033216	Eefsec	ENSMUST00000203213	ENSMUSP00000145480	TRANSLATION	protein_coding	stop	-	3	242	7	5.5	0	28.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030364	Clec2h	ENSMUST00000205225	ENSMUSP00000145424	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030364	Clec2h	ENSMUST00000204416	ENSMUSP00000145202	TRANSLATION	protein_coding	-	-	3	108	0	0.85	0	0	1	-4,-6	-	-	0.24	MINOR
ENSMUSG00000030364	Clec2h	ENSMUST00000032518	ENSMUSP00000032518	TRANSLATION	protein_coding	-	CCDS20576.1	1	218	0	3.73	0.5	46	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030364	Clec2h	ENSMUST00000204728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042607	Asb4	ENSMUST00000183358	ENSMUSP00000139245	TRANSLATION	protein_coding	-	-	1	174	0	0.998	0	46.7	0	-4,-5	-	-	8.112	MINOR
ENSMUSG00000042607	Asb4	ENSMUST00000043294	ENSMUSP00000040331	TRANSLATION	protein_coding	-	CCDS19901.1	1	426	0	1.22	7.5	87.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000063478	Tas2r114	ENSMUST00000080619	ENSMUSP00000079453	TRANSLATION	protein_coding	-	CCDS20613.1	-	309	0	0	1.5	340.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000056737	Capg	ENSMUST00000127770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056737	Capg	ENSMUST00000155188	ENSMUSP00000120363	TRANSLATION	protein_coding	stop	-	5	173	6	4.08	0	66.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056737	Capg	ENSMUST00000126101	ENSMUSP00000121121	TRANSLATION	protein_coding	stop	-	5	254	7	6.83	0	136.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056737	Capg	ENSMUST00000155705	ENSMUSP00000117440	TRANSLATION	protein_coding	stop	-	3	104	3	2.58	0	63.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056737	Capg	ENSMUST00000114072	ENSMUSP00000109706	TRANSLATION	protein_coding	-	CCDS39516.1	1	349	11	9.33	8.8	191.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000056737	Capg	ENSMUST00000137435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056737	Capg	ENSMUST00000114071	ENSMUSP00000109705	TRANSLATION	protein_coding	-	CCDS39516.1	1	349	11	9.33	8.8	191.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000056737	Capg	ENSMUST00000071044	ENSMUSP00000063389	TRANSLATION	protein_coding	-	CCDS39516.1	1	349	11	9.33	8.8	191.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000056737	Capg	ENSMUST00000134809	ENSMUSP00000118022	TRANSLATION	protein_coding	stop	-	2	90	3	2.08	0	45.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056737	Capg	ENSMUST00000126124	ENSMUSP00000121221	TRANSLATION	protein_coding	stop	-	3	193	7	4.83	0	114.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056737	Capg	ENSMUST00000156168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029781	Fkbp9	ENSMUST00000031795	ENSMUSP00000031795	TRANSLATION	protein_coding	-	CCDS39494.1	1	570	12	6.8	1.5	384.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029781	Fkbp9	ENSMUST00000147159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030092	Cntn6	ENSMUST00000161446	ENSMUSP00000124531	TRANSLATION	protein_coding	stop	-	5	36	0	0.5	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030092	Cntn6	ENSMUST00000162872	ENSMUSP00000124025	TRANSLATION	protein_coding	-	CCDS20394.1	1	1028	0	20.33	3.9	354.5	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000030092	Cntn6	ENSMUST00000161413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030092	Cntn6	ENSMUST00000089215	ENSMUSP00000086623	TRANSLATION	protein_coding	-	CCDS20394.1	1	1028	0	20.33	3.9	354.5	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000030092	Cntn6	ENSMUST00000161070	ENSMUSP00000124714	TRANSLATION	protein_coding	-	-	5	956	0	18.75	1.2	317.8	0	-4,-5	-	-	6.705	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000127063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039985	Sinhcaf	ENSMUST00000204590	ENSMUSP00000145496	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	85.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000203164	ENSMUSP00000145370	TRANSLATION	protein_coding	-	-	5	142	0	0	0	206.8	0	-4,-7	-	-	1.77	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000081956	ENSMUSP00000107188	TRANSLATION	protein_coding	-	CCDS20713.1	1	221	0	0	9.5	277.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000039985	Sinhcaf	ENSMUST00000204119	ENSMUSP00000145423	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	85.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000204435	ENSMUSP00000145487	TRANSLATION	protein_coding	-	CCDS20713.1	5	221	0	0	9.5	277.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000039985	Sinhcaf	ENSMUST00000132696	ENSMUSP00000115417	TRANSLATION	protein_coding	stop	-	2	156	0	0	0	218.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000146457	ENSMUSP00000117859	TRANSLATION	protein_coding	stop	-	2	53	0	0	0	104.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000143963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039985	Sinhcaf	ENSMUST00000139355	ENSMUSP00000119540	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	197.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039985	Sinhcaf	ENSMUST00000054080	ENSMUSP00000050952	TRANSLATION	protein_coding	-	CCDS20713.1	1	221	0	0	9.5	277.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000039985	Sinhcaf	ENSMUST00000111562	ENSMUSP00000107187	TRANSLATION	protein_coding	-	CCDS20713.1	3	221	0	0	9.5	277.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000045160	Bola3	ENSMUST00000133122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045160	Bola3	ENSMUST00000127769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045160	Bola3	ENSMUST00000136501	ENSMUSP00000118348	TRANSLATION	protein_coding	-	CCDS20278.1	1	110	0	2.5	3.9	44.4	0	-2,1	-	-	13	PRINCIPAL:2
ENSMUSG00000045160	Bola3	ENSMUST00000055875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045160	Bola3	ENSMUST00000148875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045160	Bola3	ENSMUST00000120040	ENSMUSP00000112582	TRANSLATION	protein_coding	-	-	3	136	0	2.5	0	44.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000045160	Bola3	ENSMUST00000151329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045160	Bola3	ENSMUST00000134765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045160	Bola3	ENSMUST00000122216	ENSMUSP00000113439	TRANSLATION	protein_coding	-	-	1	95	0	2.5	0	44.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000029866	Kel	ENSMUST00000141502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029866	Kel	ENSMUST00000194597	ENSMUSP00000142058	TRANSLATION	protein_coding	start	-	3	69	3	1.3	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029866	Kel	ENSMUST00000031899	ENSMUSP00000031899	TRANSLATION	protein_coding	-	CCDS20055.1	1	713	7	11.22	1.5	453.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029866	Kel	ENSMUST00000153760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029866	Kel	ENSMUST00000192118	ENSMUSP00000141251	TRANSLATION	protein_coding	start/stop	-	5	286	3	4.59	0	156.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014554	Dguok	ENSMUST00000145455	ENSMUSP00000138197	TRANSLATION	nonsense_mediated_decay	start	-	2	87	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014554	Dguok	ENSMUST00000206397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014554	Dguok	ENSMUST00000014698	ENSMUSP00000014698	TRANSLATION	protein_coding	-	CCDS20279.1	1	277	20	6.49	1.5	242.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000014554	Dguok	ENSMUST00000113888	ENSMUSP00000109520	TRANSLATION	protein_coding	-	CCDS51821.1	1	236	20	5.16	0.5	217.8	0	-4,0	-	-	13.884	MINOR
ENSMUSG00000014554	Dguok	ENSMUST00000147060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014554	Dguok	ENSMUST00000138941	ENSMUSP00000146160	TRANSLATION	nonsense_mediated_decay	start	-	3	205	17	4.08	0	165	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014554	Dguok	ENSMUST00000153415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014554	Dguok	ENSMUST00000206974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053460	Ggcx	ENSMUST00000205738	ENSMUSP00000146112	TRANSLATION	nonsense_mediated_decay	-	-	5	125	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000053460	Ggcx	ENSMUST00000207012	ENSMUSP00000146123	TRANSLATION	nonsense_mediated_decay	start	-	5	55	0	0	0	26.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053460	Ggcx	ENSMUST00000132995	ENSMUSP00000145976	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	0	0	28.1	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000053460	Ggcx	ENSMUST00000207000	ENSMUSP00000145557	TRANSLATION	nonsense_mediated_decay	start	-	5	50	0	0	0	51.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053460	Ggcx	ENSMUST00000065906	ENSMUSP00000070109	TRANSLATION	protein_coding	-	CCDS20242.1	1	757	0	0	3.9	558.5	3	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000000441	Raf1	ENSMUST00000203276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000147979	ENSMUSP00000115424	TRANSLATION	protein_coding	start/stop	-	3	205	10	2.928	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000441	Raf1	ENSMUST00000204512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000203142	ENSMUSP00000144937	TRANSLATION	nonsense_mediated_decay	start	-	3	118	5	2.844	0	84.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000441	Raf1	ENSMUST00000112949	ENSMUSP00000108571	TRANSLATION	protein_coding	-	CCDS20441.1	1	648	18	12.108	12.8	356.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000000441	Raf1	ENSMUST00000130528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000000451	ENSMUSP00000000451	TRANSLATION	protein_coding	-	CCDS20441.1	1	648	18	12.108	12.8	356.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000000441	Raf1	ENSMUST00000203826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000124553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000127503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000441	Raf1	ENSMUST00000203759	ENSMUSP00000145520	TRANSLATION	protein_coding	start	-	5	96	3	1.33	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051343	Rab11fip5	ENSMUST00000204087	ENSMUSP00000145402	TRANSLATION	protein_coding	-	CCDS85083.1	1	1318	0	1	0.5	77.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000051343	Rab11fip5	ENSMUST00000060837	ENSMUSP00000058305	TRANSLATION	protein_coding	-	CCDS20292.1	1	645	0	1	0.5	77.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000051343	Rab11fip5	ENSMUST00000204504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052751	Repin1	ENSMUST00000154010	ENSMUSP00000121975	TRANSLATION	protein_coding	stop	-	1	360	58	0.42	0	120.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052751	Repin1	ENSMUST00000009420	ENSMUSP00000009420	TRANSLATION	protein_coding	-	CCDS39480.1	1	545	100	1.2	1.5	244.2	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000052751	Repin1	ENSMUST00000163452	ENSMUSP00000132365	TRANSLATION	protein_coding	-	CCDS39480.1	1	545	100	1.2	1.5	244.2	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000052751	Repin1	ENSMUST00000135151	ENSMUSP00000118890	TRANSLATION	protein_coding	-	CCDS85041.1	1	601	100	1.2	0.5	244.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000052751	Repin1	ENSMUST00000150030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052751	Repin1	ENSMUST00000130896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052751	Repin1	ENSMUST00000118229	ENSMUSP00000113548	TRANSLATION	protein_coding	-	CCDS85042.1	1	598	100	1.2	0.5	244.2	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000042447	Mios	ENSMUST00000160265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042447	Mios	ENSMUST00000040017	ENSMUSP00000039301	TRANSLATION	protein_coding	-	CCDS39425.1	1	875	4	0.14	13.5	82.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042447	Mios	ENSMUST00000161134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115404	Vmn1r31	ENSMUST00000226390	ENSMUSP00000154691	TRANSLATION	protein_coding	-	CCDS51798.1	-	303	0	0	1.5	184.8	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115404	Vmn1r31	ENSMUST00000177318	ENSMUSP00000135555	TRANSLATION	protein_coding	-	CCDS51798.1	2	303	0	0	1.5	184.8	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115404	Vmn1r31	ENSMUST00000176023	ENSMUSP00000135252	TRANSLATION	protein_coding	-	-	2	254	0	0	0	170.9	5	-3,-6	-	-	5.166	MINOR
ENSMUSG00000115404	Vmn1r31	ENSMUST00000176147	ENSMUSP00000135282	TRANSLATION	protein_coding	-	-	3	254	0	0	0	170.9	5	-3,-6	-	-	5.166	MINOR
ENSMUSG00000115404	Vmn1r31	ENSMUST00000228586	ENSMUSP00000153749	TRANSLATION	protein_coding	-	CCDS51798.1	-	303	0	0	1.5	184.8	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000089727	Klra8	ENSMUST00000014476	ENSMUSP00000014476	TRANSLATION	protein_coding	-	CCDS51927.1	1	266	3	4	0.5	231.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000004902	Slc25a18	ENSMUST00000112682	ENSMUSP00000108302	TRANSLATION	protein_coding	-	CCDS39614.1	1	320	0	4.18	1.5	205.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049232	Tigd2	ENSMUST00000062626	ENSMUSP00000057223	TRANSLATION	protein_coding	-	CCDS39500.1	1	525	0	0	6.3	286.7	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000079299	Klrb1	ENSMUST00000203869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079299	Klrb1	ENSMUST00000112110	ENSMUSP00000107738	TRANSLATION	protein_coding	-	CCDS39653.1	1	214	0	3	1.5	61	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047735	Samd9l	ENSMUST00000201638	ENSMUSP00000144632	TRANSLATION	protein_coding	stop	-	2	103	0	0.6	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047735	Samd9l	ENSMUST00000120087	ENSMUSP00000112688	TRANSLATION	protein_coding	-	CCDS51712.1	1	1579	13	0	0.5	25.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000007216	Zfp775	ENSMUST00000204095	ENSMUSP00000145192	TRANSLATION	protein_coding	-	CCDS20107.1	2	538	44	0.9	1.5	244	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000007216	Zfp775	ENSMUST00000061720	ENSMUSP00000056290	TRANSLATION	protein_coding	-	CCDS20107.1	1	538	44	0.9	1.5	244	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000007216	Zfp775	ENSMUST00000204042	ENSMUSP00000145369	TRANSLATION	protein_coding	stop	-	1	183	12	0.6	0	73.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005364	Il5ra	ENSMUST00000204659	ENSMUSP00000144718	TRANSLATION	protein_coding	-	CCDS20396.1	1	415	3	7.79	1.5	102.1	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000005364	Il5ra	ENSMUST00000205004	ENSMUSP00000144825	TRANSLATION	protein_coding	-	-	1	76	0	0.5	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000005364	Il5ra	ENSMUST00000167925	ENSMUSP00000129781	TRANSLATION	protein_coding	-	CCDS20396.1	5	415	3	7.79	1.5	102.1	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000076580	Igkv8-27	ENSMUST00000103381	ENSMUSP00000100182	TRANSLATION	IG_V_gene	start/stop	-	-	100	2	1	0	68.2	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076580	Igkv8-27	ENSMUST00000197272	ENSMUSP00000142998	TRANSLATION	IG_V_gene	stop	-	-	120	2	1.5	0	68.2	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000030036	Mogs	ENSMUST00000145403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030036	Mogs	ENSMUST00000032114	ENSMUSP00000032114	TRANSLATION	protein_coding	-	CCDS20273.1	1	834	0	1.4	0.5	833.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000030204	Ddx47	ENSMUST00000032326	ENSMUSP00000032326	TRANSLATION	protein_coding	-	CCDS20643.1	1	455	17	10.29	5.1	271.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030204	Ddx47	ENSMUST00000205244	ENSMUSP00000145139	TRANSLATION	protein_coding	stop	-	5	196	8	5.448	0	78	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030204	Ddx47	ENSMUST00000154558	ENSMUSP00000119231	TRANSLATION	protein_coding	start/stop	-	5	360	17	9.06	0	237.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030204	Ddx47	ENSMUST00000130851	ENSMUSP00000115183	TRANSLATION	protein_coding	stop	-	3	138	1	3.81	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030204	Ddx47	ENSMUST00000123022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030204	Ddx47	ENSMUST00000155698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030204	Ddx47	ENSMUST00000205055	ENSMUSP00000145463	TRANSLATION	protein_coding	stop	-	5	180	14	3.75	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030204	Ddx47	ENSMUST00000134549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030204	Ddx47	ENSMUST00000131719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030204	Ddx47	ENSMUST00000155022	ENSMUSP00000144959	TRANSLATION	protein_coding	start	-	2	62	1	2	0	67.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030204	Ddx47	ENSMUST00000155277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030204	Ddx47	ENSMUST00000204646	ENSMUSP00000145232	TRANSLATION	protein_coding	start/stop	-	5	380	17	9.54	0	178.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030222	Rerg	ENSMUST00000032347	ENSMUSP00000032347	TRANSLATION	protein_coding	-	CCDS20663.1	1	199	19	4.08	15	145.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000030222	Rerg	ENSMUST00000119610	ENSMUSP00000113702	TRANSLATION	protein_coding	-	CCDS51942.1	3	180	16	3.58	2.9	108	0	-4,-6	-	-	13.312	MINOR
ENSMUSG00000030222	Rerg	ENSMUST00000117919	ENSMUSP00000113105	TRANSLATION	protein_coding	-	CCDS20663.1	1	199	19	4.08	15	145.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000030222	Rerg	ENSMUST00000203003	ENSMUSP00000144823	TRANSLATION	protein_coding	stop	-	3	59	2	1.33	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030222	Rerg	ENSMUST00000149100	ENSMUSP00000144902	TRANSLATION	protein_coding	-	-	1	48	3	0.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000049409	Prokr1	ENSMUST00000050887	ENSMUSP00000059034	TRANSLATION	protein_coding	-	CCDS20323.1	1	393	0	2.87	7.5	156.2	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049409	Prokr1	ENSMUST00000203636	ENSMUSP00000145476	TRANSLATION	protein_coding	stop	-	3	114	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049409	Prokr1	ENSMUST00000204682	ENSMUSP00000144999	TRANSLATION	protein_coding	-	CCDS20323.1	1	393	0	2.87	7.5	156.2	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041390	Mdfic	ENSMUST00000190255	ENSMUSP00000140641	TRANSLATION	protein_coding	-	-	1	329	0	0	0	236	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000041390	Mdfic	ENSMUST00000189359	ENSMUSP00000140208	TRANSLATION	protein_coding	-	CCDS19919.1	1	247	0	0	2.7	236	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000041390	Mdfic	ENSMUST00000140516	ENSMUSP00000117664	TRANSLATION	nonsense_mediated_decay	-	-	1	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041390	Mdfic	ENSMUST00000128849	ENSMUSP00000140800	TRANSLATION	protein_coding	stop	-	2	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041390	Mdfic	ENSMUST00000101663	ENSMUSP00000099186	TRANSLATION	protein_coding	-	CCDS19919.1	1	247	0	0	2.7	236	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000041390	Mdfic	ENSMUST00000120512	ENSMUSP00000113050	TRANSLATION	protein_coding	-	CCDS19919.1	1	247	0	0	2.7	236	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000041390	Mdfic	ENSMUST00000125326	ENSMUSP00000139704	TRANSLATION	protein_coding	-	-	1	200	0	0	0	65.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000076490	Trbc1	ENSMUST00000103291	ENSMUSP00000100099	TRANSLATION	TR_C_gene	start/stop	-	-	171	4	1.33	0	83.9	1	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076490	Trbc1	ENSMUST00000192856	ENSMUSP00000141715	TRANSLATION	TR_C_gene	start	-	-	173	4	1.33	0	83.9	1	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000030223	Ptpro	ENSMUST00000167679	ENSMUSP00000127112	TRANSLATION	protein_coding	-	CCDS51943.1	1	1198	11	8	0.5	338.6	1	4,-1	-	-	17.7	ALTERNATIVE:2
ENSMUSG00000030223	Ptpro	ENSMUST00000203914	ENSMUSP00000144870	TRANSLATION	protein_coding	-	CCDS85176.1	1	377	11	8	2.7	281.4	1	-2,-5	-	-	14.268	MINOR
ENSMUSG00000030223	Ptpro	ENSMUST00000203127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030223	Ptpro	ENSMUST00000077115	ENSMUSP00000076364	TRANSLATION	protein_coding	-	CCDS20664.1	1	1226	11	8.15	0.5	338.6	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000030223	Ptpro	ENSMUST00000167002	ENSMUSP00000131764	TRANSLATION	protein_coding	-	CCDS51944.1	1	405	11	8.15	2.7	281.4	1	-2,-5	-	-	14.568	MINOR
ENSMUSG00000030223	Ptpro	ENSMUST00000203010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030223	Ptpro	ENSMUST00000204780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030223	Ptpro	ENSMUST00000203255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062980	Cped1	ENSMUST00000141064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062980	Cped1	ENSMUST00000115383	ENSMUSP00000111041	TRANSLATION	protein_coding	-	CCDS39435.1	1	1026	0	0	1.5	0	0	-2,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000062980	Cped1	ENSMUST00000154734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062980	Cped1	ENSMUST00000137437	ENSMUSP00000119808	TRANSLATION	protein_coding	start/stop	-	1	828	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062980	Cped1	ENSMUST00000151315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062980	Cped1	ENSMUST00000115382	ENSMUSP00000111040	TRANSLATION	protein_coding	-	-	5	473	0	0	0	0	0	-2,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000062980	Cped1	ENSMUST00000153922	ENSMUSP00000138562	TRANSLATION	nonsense_mediated_decay	-	-	1	162	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000062980	Cped1	ENSMUST00000156621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031668	Eif2ak3	ENSMUST00000161316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031668	Eif2ak3	ENSMUST00000199251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031668	Eif2ak3	ENSMUST00000159401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031668	Eif2ak3	ENSMUST00000162950	ENSMUSP00000123759	TRANSLATION	protein_coding	-	CCDS85063.1	1	152	0	1	0.5	0	0	2,-3	-	-	0	MINOR
ENSMUSG00000031668	Eif2ak3	ENSMUST00000034093	ENSMUSP00000034093	TRANSLATION	protein_coding	-	CCDS20223.1	1	1114	0	10.35	0.5	170	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000061210	Olfr47	ENSMUST00000078057	ENSMUSP00000077204	TRANSLATION	protein_coding	-	CCDS20092.1	-	321	0	0.42	1.5	209.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061210	Olfr47	ENSMUST00000215569	ENSMUSP00000151056	TRANSLATION	protein_coding	-	CCDS20092.1	5	321	0	0.42	1.5	209.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094672	Vmn2r25	ENSMUST00000233622	ENSMUSP00000156904	TRANSLATION	nonsense_mediated_decay	-	-	-	500	5	1.12	0	112.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000094672	Vmn2r25	ENSMUST00000233160	ENSMUSP00000156973	TRANSLATION	nonsense_mediated_decay	-	-	-	445	5	1.12	0	112.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000094672	Vmn2r25	ENSMUST00000162046	ENSMUSP00000124342	TRANSLATION	protein_coding	-	CCDS51903.1	1	855	5	3.43	0.5	384.7	0	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000024211	Grm8	ENSMUST00000146727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024211	Grm8	ENSMUST00000115324	ENSMUSP00000110979	TRANSLATION	protein_coding	-	CCDS39443.1	1	908	23	8.25	12.8	605	6	-3,-5	-	-	21.42	PRINCIPAL:3
ENSMUSG00000024211	Grm8	ENSMUST00000131897	ENSMUSP00000120394	TRANSLATION	protein_coding	stop	-	1	293	17	2.8	0	221.6	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000024211	Grm8	ENSMUST00000090512	ENSMUSP00000087998	TRANSLATION	protein_coding	-	CCDS80495.1	1	908	23	8.25	14.8	605	6	-3,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000024211	Grm8	ENSMUST00000202861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024211	Grm8	ENSMUST00000132755	ENSMUSP00000118098	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024211	Grm8	ENSMUST00000115323	ENSMUSP00000110978	TRANSLATION	protein_coding	-	CCDS39443.1	1	908	23	8.25	12.8	605	6	-3,-5	-	-	21.42	PRINCIPAL:3
ENSMUSG00000076492	Trbj2-1	ENSMUST00000103293	ENSMUSP00000141722	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0.5	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000051917	Tas2r144	ENSMUST00000063489	ENSMUSP00000067734	TRANSLATION	protein_coding	-	CCDS20062.1	-	319	0	0	1.5	205.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000098470	C1rb	ENSMUST00000184647	ENSMUSP00000139376	TRANSLATION	protein_coding	-	CCDS71834.1	1	706	25	8.6	0.5	447.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046080	Clec9a	ENSMUST00000058352	ENSMUSP00000056625	TRANSLATION	protein_coding	-	CCDS57454.1	1	264	6	3	0.5	59	3	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000046080	Clec9a	ENSMUST00000088075	ENSMUSP00000085394	TRANSLATION	protein_coding	-	CCDS39658.1	1	238	6	3	1.5	59	3	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000046080	Clec9a	ENSMUST00000164513	ENSMUSP00000128622	TRANSLATION	protein_coding	-	CCDS57455.1	1	237	6	3	0.5	59	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000046080	Clec9a	ENSMUST00000204860	ENSMUSP00000144990	TRANSLATION	protein_coding	stop	-	1	148	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000041671	Pyroxd1	ENSMUST00000123289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041671	Pyroxd1	ENSMUST00000204971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041671	Pyroxd1	ENSMUST00000153912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041671	Pyroxd1	ENSMUST00000137098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041671	Pyroxd1	ENSMUST00000041852	ENSMUSP00000036394	TRANSLATION	protein_coding	-	CCDS20681.1	1	498	34	5.165	3.9	0	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000030256	Bhlhe41	ENSMUST00000203949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030256	Bhlhe41	ENSMUST00000032386	ENSMUSP00000032386	TRANSLATION	protein_coding	-	CCDS20697.1	1	410	0	1.44	0.5	87.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030256	Bhlhe41	ENSMUST00000111703	ENSMUSP00000107332	TRANSLATION	protein_coding	-	CCDS71860.1	3	131	0	1.44	0.5	47.8	0	-4,-5	-	-	9.282	MINOR
ENSMUSG00000040029	Ipo8	ENSMUST00000205196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000123842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000204936	ENSMUSP00000144744	TRANSLATION	nonsense_mediated_decay	-	-	5	35	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040029	Ipo8	ENSMUST00000147955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000136896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000144357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040029	Ipo8	ENSMUST00000145743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000239062	ENSMUSP00000159101	TRANSLATION	protein_coding	start	-	-	513	0	2.22	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040029	Ipo8	ENSMUST00000204424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000204016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040029	Ipo8	ENSMUST00000145960	ENSMUSP00000117365	TRANSLATION	protein_coding	stop	-	1	361	0	2.968	0	70.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040029	Ipo8	ENSMUST00000048418	ENSMUSP00000046759	TRANSLATION	protein_coding	-	CCDS39719.1	1	1010	0	6.668	1.5	130.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052656	Rnf103	ENSMUST00000150069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052656	Rnf103	ENSMUST00000114179	ENSMUSP00000109817	TRANSLATION	protein_coding	-	CCDS39508.1	5	683	8	0	0.5	40.2	3	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000052656	Rnf103	ENSMUST00000114178	ENSMUSP00000109816	TRANSLATION	protein_coding	-	-	1	185	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000052656	Rnf103	ENSMUST00000064637	ENSMUSP00000066324	TRANSLATION	protein_coding	-	CCDS39508.1	1	683	8	0	0.5	40.2	3	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038507	Parp12	ENSMUST00000038398	ENSMUSP00000039704	TRANSLATION	protein_coding	-	CCDS20019.1	1	711	27	5.15	0	216.7	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038507	Parp12	ENSMUST00000129916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004988	Fxyd4	ENSMUST00000005114	ENSMUSP00000005114	TRANSLATION	protein_coding	-	CCDS20468.1	5	88	4	2.378	7.5	85.9	2	4,-1	-	-	18.838	PRINCIPAL:1
ENSMUSG00000004988	Fxyd4	ENSMUST00000203921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004988	Fxyd4	ENSMUST00000204214	ENSMUSP00000145302	TRANSLATION	protein_coding	-	CCDS20468.1	1	88	4	2.378	7.5	85.9	2	4,-1	-	-	18.838	PRINCIPAL:1
ENSMUSG00000004988	Fxyd4	ENSMUST00000203082	ENSMUSP00000144700	TRANSLATION	protein_coding	-	CCDS20468.1	1	88	4	2.378	7.5	85.9	2	4,-1	-	-	18.838	PRINCIPAL:1
ENSMUSG00000004988	Fxyd4	ENSMUST00000203066	ENSMUSP00000145293	TRANSLATION	protein_coding	-	-	3	90	4	2.444	0	85.9	2	4,-1	-	-	16	MINOR
ENSMUSG00000004988	Fxyd4	ENSMUST00000203842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004988	Fxyd4	ENSMUST00000205111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004988	Fxyd4	ENSMUST00000204950	ENSMUSP00000145182	TRANSLATION	protein_coding	-	-	3	99	4	2.378	0.5	60.2	1	4,-1	-	-	14.044	MINOR
ENSMUSG00000004988	Fxyd4	ENSMUST00000203433	ENSMUSP00000144773	TRANSLATION	protein_coding	-	-	3	99	4	2.378	0.5	60.2	1	4,-1	-	-	14.044	MINOR
ENSMUSG00000030283	St8sia1	ENSMUST00000032421	ENSMUSP00000032421	TRANSLATION	protein_coding	-	CCDS20689.1	1	355	14	2.82	6.3	262.3	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000030283	St8sia1	ENSMUST00000205149	ENSMUSP00000145148	TRANSLATION	nonsense_mediated_decay	-	-	1	101	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030283	St8sia1	ENSMUST00000147058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079679	Vwde	ENSMUST00000054530	ENSMUSP00000058110	TRANSLATION	protein_coding	-	CCDS51722.1	1	926	0	0	0.5	43.6	0	1,-5	-	-	3.96	MINOR
ENSMUSG00000079679	Vwde	ENSMUST00000203074	ENSMUSP00000145311	TRANSLATION	protein_coding	-	-	5	1773	13	9.32	0	66.1	0	1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079679	Vwde	ENSMUST00000204800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079679	Vwde	ENSMUST00000204339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029797	Sspo	ENSMUST00000189910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029797	Sspo	ENSMUST00000185370	ENSMUSP00000139484	TRANSLATION	nonsense_mediated_decay	start	-	1	933	12	4.59	0	377.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029797	Sspo	ENSMUST00000043676	ENSMUSP00000047991	TRANSLATION	protein_coding	-	-	5	4998	67	15.28	0	1846.4	0	3,-1	-	-	15.318	MINOR
ENSMUSG00000029797	Sspo	ENSMUST00000212740	ENSMUSP00000148570	TRANSLATION	protein_coding	-	-	5	5135	67	15.28	0	1891.1	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000029797	Sspo	ENSMUST00000188970	ENSMUSP00000140642	TRANSLATION	protein_coding	start/stop	-	3	179	0	0.8	0	65	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029797	Sspo	ENSMUST00000169350	ENSMUSP00000131401	TRANSLATION	protein_coding	-	CCDS57420.1	5	5144	67	15.28	0.5	1891.1	0	3,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000106403	Igkv20-101-2	ENSMUST00000200406	ENSMUSP00000142504	TRANSLATION	IG_V_gene	stop	-	-	113	2	1	0	46.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000042770	Hebp1	ENSMUST00000204730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042770	Hebp1	ENSMUST00000204000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042770	Hebp1	ENSMUST00000045855	ENSMUSP00000042232	TRANSLATION	protein_coding	-	CCDS20645.1	1	190	0	3.75	13.5	130.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000042770	Hebp1	ENSMUST00000205232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001520	Nrip2	ENSMUST00000147155	ENSMUSP00000122305	TRANSLATION	nonsense_mediated_decay	start	-	5	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001520	Nrip2	ENSMUST00000123867	ENSMUSP00000122558	TRANSLATION	protein_coding	stop	-	5	219	1	1.51	0	23.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001520	Nrip2	ENSMUST00000204836	ENSMUSP00000144750	TRANSLATION	non_stop_decay	start/stop	-	5	190	1	1.51	0	23.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001520	Nrip2	ENSMUST00000001561	ENSMUSP00000001561	TRANSLATION	protein_coding	-	CCDS20571.1	1	229	1	2.31	2.7	28.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001520	Nrip2	ENSMUST00000120405	ENSMUSP00000113317	TRANSLATION	protein_coding	-	CCDS51917.1	2	270	1	1.51	0.5	22	0	-4,-5	-	-	8.556	MINOR
ENSMUSG00000001520	Nrip2	ENSMUST00000136631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062833	Sval3	ENSMUST00000080742	ENSMUSP00000079566	TRANSLATION	protein_coding	-	CCDS20059.1	1	144	0	0	0.5	146.3	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000030086	Chchd6	ENSMUST00000204654	ENSMUSP00000145207	TRANSLATION	nonsense_mediated_decay	start	-	5	57	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030086	Chchd6	ENSMUST00000032172	ENSMUSP00000032172	TRANSLATION	protein_coding	-	CCDS39557.1	1	273	0	0	0.5	177.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030086	Chchd6	ENSMUST00000113550	ENSMUSP00000109179	TRANSLATION	protein_coding	-	CCDS51846.1	5	245	0	0	0.5	95.8	0	-4,-5	-	-	1.074	MINOR
ENSMUSG00000030086	Chchd6	ENSMUST00000204970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004535	Tax1bp1	ENSMUST00000138040	ENSMUSP00000119522	TRANSLATION	protein_coding	stop	-	3	172	0	3	0	201.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004535	Tax1bp1	ENSMUST00000147513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004535	Tax1bp1	ENSMUST00000149586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004535	Tax1bp1	ENSMUST00000149588	ENSMUSP00000116059	TRANSLATION	protein_coding	stop	-	2	161	0	3	0	192.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004535	Tax1bp1	ENSMUST00000128173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004535	Tax1bp1	ENSMUST00000080723	ENSMUSP00000079548	TRANSLATION	protein_coding	-	CCDS39490.1	1	814	7	4	1.5	299.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000004535	Tax1bp1	ENSMUST00000129660	ENSMUSP00000122922	TRANSLATION	protein_coding	stop	-	2	87	0	2	0	105.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000107499	Ccdc142	ENSMUST00000134891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107499	Ccdc142	ENSMUST00000203533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107499	Ccdc142	ENSMUST00000101254	ENSMUSP00000098812	TRANSLATION	protein_coding	-	CCDS39527.1	5	738	0	0	1.5	566.1	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000002930	Ppp1r17	ENSMUST00000052827	ENSMUSP00000059708	TRANSLATION	protein_coding	-	CCDS20169.1	1	159	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000004446	Bid	ENSMUST00000160684	ENSMUSP00000125731	TRANSLATION	nonsense_mediated_decay	-	-	1	195	0	3.75	0.5	302.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004446	Bid	ENSMUST00000161594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004446	Bid	ENSMUST00000125915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004446	Bid	ENSMUST00000145948	ENSMUSP00000117529	TRANSLATION	protein_coding	stop	-	3	52	0	1	0	48.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004446	Bid	ENSMUST00000004560	ENSMUSP00000004560	TRANSLATION	protein_coding	-	CCDS20486.1	1	195	0	3.75	0.5	302.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059382	Tas2r120	ENSMUST00000071707	ENSMUSP00000071626	TRANSLATION	protein_coding	-	CCDS20617.1	-	295	0	0	1.5	253.6	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030122	Ptms	ENSMUST00000181150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030122	Ptms	ENSMUST00000134916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030122	Ptms	ENSMUST00000203422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030122	Ptms	ENSMUST00000032216	ENSMUSP00000032216	TRANSLATION	protein_coding	-	CCDS39630.1	1	101	0	0	2.5	54.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030122	Ptms	ENSMUST00000204671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029909	Prss37	ENSMUST00000031967	ENSMUSP00000031967	TRANSLATION	protein_coding	-	CCDS20033.1	1	237	2	3.34	3.9	88.3	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000029909	Prss37	ENSMUST00000148195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076481	Trbv30	ENSMUST00000103282	ENSMUSP00000100098	TRANSLATION	TR_V_gene	stop	-	-	110	0	1.5	0	37.5	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076481	Trbv30	ENSMUST00000191646	ENSMUSP00000141290	TRANSLATION	TR_V_gene	stop	-	-	111	0	1.5	0	37.5	0	2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000053391	Olfr211	ENSMUST00000203700	ENSMUSP00000145330	TRANSLATION	protein_coding	-	CCDS20453.1	2	309	0	0.42	2.8	165.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053391	Olfr211	ENSMUST00000065786	ENSMUSP00000066524	TRANSLATION	protein_coding	-	CCDS20453.1	-	309	0	0.42	2.8	165.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004631	Sgce	ENSMUST00000128109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004631	Sgce	ENSMUST00000126151	ENSMUSP00000120718	TRANSLATION	protein_coding	-	-	5	396	0	0	2.4	397.5	2	-4,-7	-	-	4.63	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000004750	ENSMUSP00000004750	TRANSLATION	protein_coding	-	CCDS85013.1	1	451	0	0	5.3	407.2	2	-4,-7	-	-	6.56	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000133306	ENSMUSP00000121964	TRANSLATION	protein_coding	-	CCDS51717.1	1	443	0	0	0.5	431.2	2	-4,-7	-	-	6	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000115579	ENSMUSP00000111242	TRANSLATION	protein_coding	-	CCDS51716.1	1	437	0	0	5.1	431.2	2	-4,-7	-	-	7.906	ALTERNATIVE:1
ENSMUSG00000004631	Sgce	ENSMUST00000101677	ENSMUSP00000099200	TRANSLATION	protein_coding	-	CCDS51715.1	1	434	0	0	0.5	407.2	2	-4,-7	-	-	4.56	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000090686	ENSMUSP00000088185	TRANSLATION	protein_coding	-	-	5	428	0	0	3.6	407.2	2	-4,-7	-	-	5.77	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000139029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004631	Sgce	ENSMUST00000123907	ENSMUSP00000120910	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004631	Sgce	ENSMUST00000204897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004631	Sgce	ENSMUST00000203556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004631	Sgce	ENSMUST00000115577	ENSMUSP00000111240	TRANSLATION	protein_coding	-	CCDS51718.1	1	473	0	0	5.3	427.4	2	-2,-5	-	-	7.772	PRINCIPAL:4
ENSMUSG00000004631	Sgce	ENSMUST00000153284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040112	Mrps35	ENSMUST00000036111	ENSMUSP00000048348	TRANSLATION	protein_coding	-	CCDS51959.1	1	320	0	6.399	1.5	69.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000040112	Mrps35	ENSMUST00000143204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040112	Mrps35	ENSMUST00000137556	ENSMUSP00000144920	TRANSLATION	protein_coding	stop	-	5	85	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040112	Mrps35	ENSMUST00000123139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040112	Mrps35	ENSMUST00000149660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071481	Olfr437	ENSMUST00000060243	ENSMUSP00000058147	TRANSLATION	protein_coding	-	CCDS20088.1	-	310	0	0.42	6.3	201.1	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000071481	Olfr437	ENSMUST00000205175	ENSMUSP00000145490	TRANSLATION	protein_coding	-	CCDS20088.1	5	310	0	0.42	6.3	201.1	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000007827	Ankrd26	ENSMUST00000188022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007827	Ankrd26	ENSMUST00000112830	ENSMUSP00000108449	TRANSLATION	protein_coding	-	CCDS39609.1	5	1681	0	3.905	0.5	717.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000007827	Ankrd26	ENSMUST00000188172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047749	Zc3hav1l	ENSMUST00000058524	ENSMUSP00000062475	TRANSLATION	protein_coding	-	CCDS20011.1	1	296	16	2	0.5	0	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029772	Ahcyl2	ENSMUST00000064872	ENSMUSP00000067638	TRANSLATION	protein_coding	-	CCDS85024.1	5	508	43	13.23	7.6	498	0	-4,-5	-	-	20.301	ALTERNATIVE:1
ENSMUSG00000029772	Ahcyl2	ENSMUST00000125911	ENSMUSP00000135518	TRANSLATION	protein_coding	-	-	5	404	43	12.08	1.2	461.7	0	-4,-1	-	-	13.593	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000201282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000143707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000176265	ENSMUSP00000135714	TRANSLATION	protein_coding	stop	-	5	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000149816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000134438	ENSMUSP00000118790	TRANSLATION	protein_coding	stop	-	5	238	6	4.73	0	225.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000150365	ENSMUSP00000134827	TRANSLATION	nonsense_mediated_decay	-	-	2	160	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000202115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000201020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000128837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029772	Ahcyl2	ENSMUST00000176693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029772	Ahcyl2	ENSMUST00000102995	ENSMUSP00000100060	TRANSLATION	protein_coding	-	CCDS57416.1	5	612	43	13.23	7.5	498	0	-4,-5	-	-	20.268	ALTERNATIVE:1
ENSMUSG00000029772	Ahcyl2	ENSMUST00000135396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000154079	ENSMUSP00000115093	TRANSLATION	protein_coding	stop	-	3	181	5	3.48	0	167.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000141304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029772	Ahcyl2	ENSMUST00000136031	ENSMUSP00000135362	TRANSLATION	protein_coding	stop	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000143091	ENSMUSP00000144873	TRANSLATION	protein_coding	stop	-	3	115	6	3.58	0	185.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000115238	ENSMUSP00000110893	TRANSLATION	protein_coding	-	CCDS51738.1	1	508	43	13.23	9.6	498	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000029772	Ahcyl2	ENSMUST00000115242	ENSMUSP00000110897	TRANSLATION	protein_coding	-	CCDS19966.3	1	613	43	13.23	7.5	498	0	-4,-5	-	-	20.268	PRINCIPAL:3
ENSMUSG00000029772	Ahcyl2	ENSMUST00000152581	ENSMUSP00000135386	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029772	Ahcyl2	ENSMUST00000138205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029772	Ahcyl2	ENSMUST00000128927	ENSMUSP00000135633	TRANSLATION	protein_coding	stop	-	5	223	6	4.73	0	225.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000146268	ENSMUSP00000116142	TRANSLATION	protein_coding	stop	-	3	125	0	2.88	0	101.7	9	-1,-5	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000145940	ENSMUSP00000144650	TRANSLATION	protein_coding	stop	-	5	21	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000202141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030352	Tspan9	ENSMUST00000032503	ENSMUSP00000032503	TRANSLATION	protein_coding	-	CCDS20568.1	1	239	0	4	19.5	191.1	10	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030352	Tspan9	ENSMUST00000112171	ENSMUSP00000107794	TRANSLATION	protein_coding	-	CCDS20568.1	1	239	0	4	19.5	191.1	10	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030352	Tspan9	ENSMUST00000112173	ENSMUSP00000107796	TRANSLATION	protein_coding	-	CCDS20568.1	1	239	0	4	19.5	191.1	10	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030352	Tspan9	ENSMUST00000127075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030352	Tspan9	ENSMUST00000202372	ENSMUSP00000143827	TRANSLATION	protein_coding	stop	-	5	167	0	3.38	0	143.8	9	-1,-5	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000127105	ENSMUSP00000115324	TRANSLATION	protein_coding	stop	-	3	56	0	0.6	0	33.7	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000154375	ENSMUSP00000114763	TRANSLATION	protein_coding	stop	-	3	127	0	2.78	0	101.7	9	-1,-5	-	-	-1	MINOR
ENSMUSG00000030352	Tspan9	ENSMUST00000123786	ENSMUSP00000115922	TRANSLATION	protein_coding	stop	-	3	263	0	3.38	0	149.8	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000029816	Gpnmb	ENSMUST00000204460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029816	Gpnmb	ENSMUST00000205103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029816	Gpnmb	ENSMUST00000204260	ENSMUSP00000145376	TRANSLATION	protein_coding	-	-	1	526	0	0	0	34.8	1	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000029816	Gpnmb	ENSMUST00000203757	ENSMUSP00000145090	TRANSLATION	nonsense_mediated_decay	-	-	2	37	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029816	Gpnmb	ENSMUST00000031840	ENSMUSP00000031840	TRANSLATION	protein_coding	-	CCDS20122.1	1	574	0	0	1.5	34.8	1	2,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000030074	Gxylt2	ENSMUST00000141333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030074	Gxylt2	ENSMUST00000032157	ENSMUSP00000032157	TRANSLATION	protein_coding	-	CCDS20390.1	1	444	19	0.84	1.7	48.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000067702	Tuba3a	ENSMUST00000088246	ENSMUSP00000085580	TRANSLATION	protein_coding	-	CCDS39640.1	1	450	24	4	17.5	400.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000043148	ENSMUSP00000046557	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000204511	ENSMUSP00000145346	TRANSLATION	protein_coding	-	-	5	83	0	1.799	0	45.3	0	-4,-1	-	-	9	MINOR
ENSMUSG00000036402	Gng12	ENSMUST00000114225	ENSMUSP00000109863	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000204862	ENSMUSP00000145234	TRANSLATION	protein_coding	stop	-	3	65	0	2	0	55.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036402	Gng12	ENSMUST00000114228	ENSMUSP00000109866	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000114224	ENSMUSP00000109862	TRANSLATION	protein_coding	-	CCDS39502.1	3	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000114222	ENSMUSP00000109860	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000114226	ENSMUSP00000109864	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000036402	Gng12	ENSMUST00000114227	ENSMUSP00000109865	TRANSLATION	protein_coding	-	CCDS39502.1	1	72	0	2.264	21.5	64.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000039264	Gimap3	ENSMUST00000038811	ENSMUSP00000047435	TRANSLATION	protein_coding	-	CCDS20115.1	2	301	17	0.8	0.5	261.5	1	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039264	Gimap3	ENSMUST00000204036	ENSMUSP00000145211	TRANSLATION	protein_coding	-	CCDS20115.1	1	301	17	0.8	0.5	261.5	1	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030087	Klf15	ENSMUST00000032174	ENSMUSP00000032174	TRANSLATION	protein_coding	-	CCDS20360.1	1	415	12	1.6	3.9	65.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030087	Klf15	ENSMUST00000205136	ENSMUSP00000145043	TRANSLATION	protein_coding	start	-	1	153	6	1	0	17.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030087	Klf15	ENSMUST00000203607	ENSMUSP00000144808	TRANSLATION	protein_coding	-	CCDS20360.1	1	415	12	1.6	3.9	65.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030087	Klf15	ENSMUST00000113530	ENSMUSP00000109158	TRANSLATION	protein_coding	-	CCDS20360.1	5	415	12	1.6	3.9	65.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030087	Klf15	ENSMUST00000203039	ENSMUSP00000144962	TRANSLATION	protein_coding	-	CCDS20360.1	5	415	12	1.6	3.9	65.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000096594	Igkv8-19	ENSMUST00000196599	ENSMUSP00000143247	TRANSLATION	IG_V_gene	stop	-	-	121	0	1.5	0	69.1	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096594	Igkv8-19	ENSMUST00000103389	ENSMUSP00000100190	TRANSLATION	IG_V_gene	start/stop	-	-	101	0	1	0	69.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000045100	Slc25a26	ENSMUST00000204235	ENSMUSP00000145328	TRANSLATION	nonsense_mediated_decay	-	-	1	121	0	2.172	0	55.8	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000045100	Slc25a26	ENSMUST00000205254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045100	Slc25a26	ENSMUST00000204985	ENSMUSP00000145025	TRANSLATION	nonsense_mediated_decay	start	-	1	155	0	2.705	0	66.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045100	Slc25a26	ENSMUST00000205173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045100	Slc25a26	ENSMUST00000203484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045100	Slc25a26	ENSMUST00000061118	ENSMUSP00000058028	TRANSLATION	protein_coding	-	CCDS20379.1	1	274	0	5.537	6.5	169.7	3	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045100	Slc25a26	ENSMUST00000204764	ENSMUSP00000144816	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	1.482	0	31.6	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000056091	St3gal5	ENSMUST00000114112	ENSMUSP00000109747	TRANSLATION	protein_coding	-	CCDS39510.1	1	387	9	2.75	5.1	253.7	2	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000056091	St3gal5	ENSMUST00000187007	ENSMUSP00000146063	TRANSLATION	protein_coding	start/stop	-	3	222	4	1.51	0	106	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056091	St3gal5	ENSMUST00000188366	ENSMUSP00000145599	TRANSLATION	protein_coding	stop	-	3	122	0	0.28	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000056091	St3gal5	ENSMUST00000069994	ENSMUSP00000070414	TRANSLATION	protein_coding	-	CCDS20237.1	1	414	9	2.75	1.5	253.7	2	-4,-2	-	-	18.244	MINOR
ENSMUSG00000060724	Vmn1r47	ENSMUST00000227811	ENSMUSP00000153727	TRANSLATION	protein_coding	-	CCDS20349.1	-	310	0	0	1.5	414.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060724	Vmn1r47	ENSMUST00000074881	ENSMUSP00000074422	TRANSLATION	protein_coding	-	CCDS20349.1	-	310	0	0	1.5	414.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060724	Vmn1r47	ENSMUST00000227229	ENSMUSP00000154255	TRANSLATION	protein_coding	-	CCDS20349.1	-	310	0	0	1.5	414.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060724	Vmn1r47	ENSMUST00000228680	ENSMUSP00000154134	TRANSLATION	protein_coding	-	CCDS20349.1	-	310	0	0	1.5	414.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000001761	Smo	ENSMUST00000201515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001761	Smo	ENSMUST00000001812	ENSMUSP00000001812	TRANSLATION	protein_coding	-	CCDS19965.1	1	793	0	9	1.5	361.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000108011	Gm44596	ENSMUST00000204223	ENSMUSP00000145012	TRANSLATION	protein_coding,RT	stop	-	5	210	1	0	0	0	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000096844	Igkv6-14	ENSMUST00000103394	ENSMUSP00000100195	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	56.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000078179	Rnf148	ENSMUST00000104979	ENSMUSP00000100592	TRANSLATION	protein_coding	-	CCDS51726.1	-	316	8	0.48	1.5	78.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000091983	Olfr457	ENSMUST00000203396	ENSMUSP00000145162	TRANSLATION	protein_coding	-	CCDS20072.1	3	313	0	0.42	5.2	178.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000091983	Olfr457	ENSMUST00000170504	ENSMUSP00000127348	TRANSLATION	protein_coding	-	CCDS20072.1	-	313	0	0.42	5.2	178.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000091983	Olfr457	ENSMUST00000204324	ENSMUSP00000144914	TRANSLATION	protein_coding	-	CCDS20072.1	3	313	0	0.42	5.2	178.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000030060	Hmces	ENSMUST00000204614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030060	Hmces	ENSMUST00000132651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030060	Hmces	ENSMUST00000204232	ENSMUSP00000145504	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030060	Hmces	ENSMUST00000124551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030060	Hmces	ENSMUST00000148914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030060	Hmces	ENSMUST00000032141	ENSMUSP00000032141	TRANSLATION	protein_coding	-	CCDS39551.1	1	353	0	5	3.9	221.6	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000030060	Hmces	ENSMUST00000113606	ENSMUSP00000109236	TRANSLATION	protein_coding	-	CCDS39551.1	1	353	0	5	3.9	221.6	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000048022	Tmem229a	ENSMUST00000127247	ENSMUSP00000116234	TRANSLATION	protein_coding	-	CCDS51729.1	-	371	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000030045	Mrpl19	ENSMUST00000128374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030045	Mrpl19	ENSMUST00000032124	ENSMUSP00000032124	TRANSLATION	protein_coding	-	CCDS39523.1	1	292	0	5	3.9	0	0	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000030045	Mrpl19	ENSMUST00000148025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089728	Clec2f	ENSMUST00000204981	ENSMUSP00000158978	TRANSLATION	protein_coding	-	-	1	208	0	3	0.5	54.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030208	Emp1	ENSMUST00000111907	ENSMUSP00000107538	TRANSLATION	protein_coding	-	CCDS20647.1	1	160	0	0	5.1	183.6	3	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030208	Emp1	ENSMUST00000204894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030208	Emp1	ENSMUST00000204299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030208	Emp1	ENSMUST00000032330	ENSMUSP00000032330	TRANSLATION	protein_coding	-	CCDS20647.1	1	160	0	0	5.1	183.6	3	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030208	Emp1	ENSMUST00000205156	ENSMUSP00000145069	TRANSLATION	protein_coding	-	CCDS20647.1	5	160	0	0	5.1	183.6	3	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030208	Emp1	ENSMUST00000154270	ENSMUSP00000138789	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000090891	D6Ertd527e	ENSMUST00000203725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090891	D6Ertd527e	ENSMUST00000204927	ENSMUSP00000145529	TRANSLATION	protein_coding	-	CCDS51837.1	1	464	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:3
ENSMUSG00000090891	D6Ertd527e	ENSMUST00000203747	ENSMUSP00000144761	TRANSLATION	protein_coding	-	-	5	463	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000090891	D6Ertd527e	ENSMUST00000170124	ENSMUSP00000130803	TRANSLATION	protein_coding	-	CCDS85089.1	1	463	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000090891	D6Ertd527e	ENSMUST00000205257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030255	Sspn	ENSMUST00000111702	ENSMUSP00000107331	TRANSLATION	protein_coding	-	CCDS80637.1	2	140	0	0	4.1	51.4	4	-3,-6	-	-	3.85	MINOR
ENSMUSG00000030255	Sspn	ENSMUST00000032383	ENSMUSP00000032383	TRANSLATION	protein_coding	-	CCDS20698.1	1	216	0	0	1.5	103.9	6	-4,-7	-	-	6.161	PRINCIPAL:1
ENSMUSG00000030255	Sspn	ENSMUST00000111701	ENSMUSP00000107330	TRANSLATION	protein_coding	-	CCDS80637.1	3	140	0	0	4.1	51.4	4	-3,-6	-	-	3.85	MINOR
ENSMUSG00000107705	Gm45062	ENSMUST00000162564	ENSMUSP00000125725	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	131	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000009281	Rarres2	ENSMUST00000204930	ENSMUSP00000144799	TRANSLATION	protein_coding	-	CCDS20105.1	2	162	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000009281	Rarres2	ENSMUST00000009425	ENSMUSP00000009425	TRANSLATION	protein_coding	-	CCDS85040.1	2	163	0	0	1.5	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000009281	Rarres2	ENSMUST00000204182	ENSMUSP00000145257	TRANSLATION	protein_coding	-	CCDS85040.1	5	163	0	0	1.5	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000009281	Rarres2	ENSMUST00000203541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009281	Rarres2	ENSMUST00000204267	ENSMUSP00000144793	TRANSLATION	protein_coding	-	CCDS20105.1	1	162	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000090698	Apold1	ENSMUST00000167323	ENSMUSP00000132366	TRANSLATION	protein_coding	-	CCDS51938.1	2	246	0	0	6.3	50	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000090631	Olfr456	ENSMUST00000057251	ENSMUSP00000060839	TRANSLATION	protein_coding	-	CCDS20073.1	-	312	0	0.42	5.2	166.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000115091	Vmn1r22	ENSMUST00000228905	ENSMUSP00000154414	TRANSLATION	protein_coding	-	-	-	112	0	0	0	70.8	2	-4,-2	-	-	0	MINOR
ENSMUSG00000115091	Vmn1r22	ENSMUST00000228257	ENSMUSP00000154422	TRANSLATION	protein_coding	-	CCDS20187.1	-	302	0	0	1.5	188.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115091	Vmn1r22	ENSMUST00000227650	ENSMUSP00000153802	TRANSLATION	protein_coding	-	CCDS20187.1	-	302	0	0	1.5	188.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115091	Vmn1r22	ENSMUST00000228076	ENSMUSP00000154262	TRANSLATION	protein_coding	-	CCDS20187.1	-	302	0	0	1.5	188.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115091	Vmn1r22	ENSMUST00000227342	ENSMUSP00000154812	TRANSLATION	protein_coding	-	-	-	112	0	0	0	70.8	2	-4,-2	-	-	0	MINOR
ENSMUSG00000115091	Vmn1r22	ENSMUST00000228322	ENSMUSP00000154301	TRANSLATION	protein_coding	-	CCDS20187.1	-	302	0	0	1.5	188.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057699	Tas2r131	ENSMUST00000082085	ENSMUSP00000080736	TRANSLATION	protein_coding	-	CCDS20630.1	-	310	0	0	0.5	218.9	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000076465	Trbv5	ENSMUST00000103266	ENSMUSP00000100082	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	45.8	0	-1,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000053389	Tas2r107	ENSMUST00000065781	ENSMUSP00000067082	TRANSLATION	protein_coding	-	CCDS20609.1	-	308	0	0	1.5	348.1	0	-1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000071147	Tas2r140	ENSMUST00000095391	ENSMUSP00000093040	TRANSLATION	protein_coding	-	CCDS20633.1	-	312	0	0	0.5	281.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030137	Tuba8	ENSMUST00000032233	ENSMUSP00000032233	TRANSLATION	protein_coding	-	CCDS39615.1	1	449	24	4	10.8	396.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030143	Gm8882	ENSMUST00000080849	ENSMUSP00000079660	TRANSLATION	protein_coding	-	CCDS57459.1	1	283	0	0	0.5	145.4	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000029769	Ccdc136	ENSMUST00000145310	ENSMUSP00000145331	TRANSLATION	protein_coding	-	CCDS85021.1	5	443	0	0	0.5	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029769	Ccdc136	ENSMUST00000132232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029769	Ccdc136	ENSMUST00000180829	ENSMUSP00000137747	TRANSLATION	protein_coding	-	CCDS59693.1	1	908	0	0	0.5	0	3	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029769	Ccdc136	ENSMUST00000202726	ENSMUSP00000144577	TRANSLATION	protein_coding	start	-	3	127	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000029769	Ccdc136	ENSMUST00000127611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029769	Ccdc136	ENSMUST00000115275	ENSMUSP00000110930	TRANSLATION	protein_coding	-	CCDS85020.1	5	1000	0	0	0.5	0	3	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029769	Ccdc136	ENSMUST00000143599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029769	Ccdc136	ENSMUST00000154619	ENSMUSP00000118132	TRANSLATION	protein_coding	-	-	5	1029	0	0	0.5	0	3	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029769	Ccdc136	ENSMUST00000096084	ENSMUSP00000093789	TRANSLATION	protein_coding	-	CCDS85019.1	5	1187	0	0	0.5	0	3	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029769	Ccdc136	ENSMUST00000181464	ENSMUSP00000137673	TRANSLATION	protein_coding	-	CCDS51736.2	1	1002	0	0	0.5	0	3	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000030147	Clec4b1	ENSMUST00000077228	ENSMUSP00000076466	TRANSLATION	protein_coding	-	CCDS39625.1	1	176	5	3	0.5	76.1	0	-3,-5	-	-	16.202	PRINCIPAL:3
ENSMUSG00000030147	Clec4b1	ENSMUST00000078559	ENSMUSP00000077636	TRANSLATION	protein_coding	-	CCDS51893.1	1	209	5	3.4	0.5	76.1	0	-3,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000079462	Gm15737	ENSMUST00000113434	ENSMUSP00000109061	TRANSLATION	protein_coding	-	-	1	106	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000115701	Vmn1r6	ENSMUST00000227131	ENSMUSP00000153994	TRANSLATION	protein_coding	-	CCDS20173.1	-	303	0	0	1.5	178.3	9	-3,-5	-	-	5.928	PRINCIPAL:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000227631	ENSMUSP00000154199	TRANSLATION	protein_coding	-	-	-	281	0	0	0	179.5	8	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000228285	ENSMUSP00000153988	TRANSLATION	protein_coding	-	CCDS20173.1	-	303	0	0	1.5	178.3	9	-3,-5	-	-	5.928	PRINCIPAL:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000226689	ENSMUSP00000154450	TRANSLATION	protein_coding	-	CCDS20173.1	-	303	0	0	1.5	178.3	9	-3,-5	-	-	5.928	PRINCIPAL:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000079669	ENSMUSP00000078611	TRANSLATION	protein_coding	-	CCDS20173.1	-	303	0	0	1.5	178.3	9	-3,-5	-	-	5.928	PRINCIPAL:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000227188	ENSMUSP00000153914	TRANSLATION	protein_coding	-	-	-	281	0	0	0	179.5	8	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000115701	Vmn1r6	ENSMUST00000227847	ENSMUSP00000154306	TRANSLATION	protein_coding	-	CCDS20173.1	-	303	0	0	1.5	178.3	9	-3,-5	-	-	5.928	PRINCIPAL:2
ENSMUSG00000057381	Tas2r123	ENSMUST00000071696	ENSMUSP00000071615	TRANSLATION	protein_coding	-	CCDS20624.1	-	333	0	0	1.5	259.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030275	Etnk1	ENSMUST00000205256	ENSMUSP00000144903	TRANSLATION	protein_coding	-	-	1	336	16	3.07	0	207.1	0	-4,-5	-	-	15.3	MINOR
ENSMUSG00000030275	Etnk1	ENSMUST00000032413	ENSMUSP00000032413	TRANSLATION	protein_coding	-	CCDS57468.1	1	363	16	4.42	9.6	207.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030275	Etnk1	ENSMUST00000204947	ENSMUSP00000145041	TRANSLATION	protein_coding	-	-	1	373	16	3.07	0	207.1	0	-4,-5	-	-	15.3	MINOR
ENSMUSG00000030275	Etnk1	ENSMUST00000203341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032718	Mansc1	ENSMUST00000047443	ENSMUSP00000038346	TRANSLATION	protein_coding	-	CCDS20637.1	1	414	0	0.72	0.5	69.9	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000029695	Aass	ENSMUST00000152280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029695	Aass	ENSMUST00000138063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029695	Aass	ENSMUST00000149864	ENSMUSP00000115079	TRANSLATION	protein_coding	start/stop	-	3	209	15	3.44	0	87.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029695	Aass	ENSMUST00000031707	ENSMUSP00000031707	TRANSLATION	protein_coding	-	CCDS19937.1	1	926	23	11.487	6.3	463.7	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000030268	Bcat1	ENSMUST00000136819	ENSMUSP00000117708	TRANSLATION	protein_coding	start	-	2	83	4	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000032402	ENSMUSP00000032402	TRANSLATION	protein_coding	-	CCDS20691.1	1	453	19	9.66	0.5	0	0	-2,2	-	-	12	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000155693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030268	Bcat1	ENSMUST00000154611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030268	Bcat1	ENSMUST00000145911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030268	Bcat1	ENSMUST00000048252	ENSMUSP00000039744	TRANSLATION	protein_coding	-	-	1	393	18	9.52	0	0	0	-4,-5	-	-	11.052	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000123930	ENSMUSP00000120180	TRANSLATION	protein_coding	stop	-	2	223	5	5.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000149769	ENSMUSP00000116091	TRANSLATION	protein_coding	stop	-	3	136	2	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000204138	ENSMUSP00000144968	TRANSLATION	protein_coding	start/stop	-	5	180	14	3.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030268	Bcat1	ENSMUST00000111742	ENSMUSP00000107371	TRANSLATION	protein_coding	-	CCDS39703.1	1	386	18	9.66	6.5	0	0	-4,-5	-	-	13.334	PRINCIPAL:1
ENSMUSG00000071537	Klrg2	ENSMUST00000202245	ENSMUSP00000144581	TRANSLATION	nonsense_mediated_decay	-	-	1	239	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071537	Klrg2	ENSMUST00000201345	ENSMUSP00000143835	TRANSLATION	protein_coding	-	-	5	200	0	2	0	40.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000071537	Klrg2	ENSMUST00000096030	ENSMUSP00000093732	TRANSLATION	protein_coding	-	CCDS20016.1	1	387	0	2	1.5	40.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000076484	Trbj1-2	ENSMUST00000103285	ENSMUSP00000141699	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035158	Mitf	ENSMUST00000139462	ENSMUSP00000123433	TRANSLATION	nonsense_mediated_decay	-	-	2	105	0	0	0	92.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035158	Mitf	ENSMUST00000113339	ENSMUSP00000108965	TRANSLATION	protein_coding	-	-	5	501	0	3.18	0	351.7	0	-4,-7	-	-	12	MINOR
ENSMUSG00000035158	Mitf	ENSMUST00000203884	ENSMUSP00000145132	TRANSLATION	protein_coding	-	-	5	520	0	2.85	13.6	351.7	0	-4,-5	-	-	15.34	ALTERNATIVE:1
ENSMUSG00000035158	Mitf	ENSMUST00000148233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035158	Mitf	ENSMUST00000043628	ENSMUSP00000044459	TRANSLATION	protein_coding	-	CCDS20385.1	1	419	0	3.18	8.6	277.1	0	-4,-5	-	-	9.936	MINOR
ENSMUSG00000035158	Mitf	ENSMUST00000043637	ENSMUSP00000044938	TRANSLATION	protein_coding	-	CCDS51861.1	1	526	0	3.18	11.6	351.7	0	-4,-5	-	-	15.364	PRINCIPAL:2
ENSMUSG00000035158	Mitf	ENSMUST00000101123	ENSMUSP00000098683	TRANSLATION	protein_coding	-	CCDS51862.1	5	510	0	3.18	7.6	351.7	0	-4,-6	-	-	14.096	MINOR
ENSMUSG00000035158	Mitf	ENSMUST00000203938	ENSMUSP00000144988	TRANSLATION	protein_coding	-	-	5	357	0	2.85	3.7	216	0	-4,-5	-	-	6.196	MINOR
ENSMUSG00000094478	Igkv3-3	ENSMUST00000103402	ENSMUSP00000100203	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	67.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000036390	Gadd45a	ENSMUST00000126194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036390	Gadd45a	ENSMUST00000043098	ENSMUSP00000044034	TRANSLATION	protein_coding	-	CCDS20217.1	1	165	0	3.75	7.5	58.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036390	Gadd45a	ENSMUST00000151958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036390	Gadd45a	ENSMUST00000204282	ENSMUSP00000145136	TRANSLATION	protein_coding	-	-	5	60	0	1.5	1.2	0	0	-4,-5	-	-	1.593	MINOR
ENSMUSG00000036390	Gadd45a	ENSMUST00000155041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036390	Gadd45a	ENSMUST00000204369	ENSMUSP00000145432	TRANSLATION	protein_coding	-	-	5	131	0	2.75	2.4	33.6	0	-4,-5	-	-	8.067	MINOR
ENSMUSG00000036390	Gadd45a	ENSMUST00000128617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038346	Zfp384	ENSMUST00000112427	ENSMUSP00000108046	TRANSLATION	protein_coding	-	CCDS39631.1	5	584	32	3.55	0.5	154.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038346	Zfp384	ENSMUST00000140835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038346	Zfp384	ENSMUST00000046064	ENSMUSP00000037986	TRANSLATION	protein_coding	-	CCDS57448.1	5	554	24	2.55	0.5	110.9	0	-4,-5	-	-	8.04	MINOR
ENSMUSG00000038346	Zfp384	ENSMUST00000054553	ENSMUSP00000086354	TRANSLATION	protein_coding	-	-	5	468	24	2.55	0	110.9	0	-4,-5	-	-	8.04	MINOR
ENSMUSG00000038346	Zfp384	ENSMUST00000144308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038346	Zfp384	ENSMUST00000112428	ENSMUSP00000108047	TRANSLATION	protein_coding	-	CCDS57448.1	1	554	24	2.55	0.5	110.9	0	-4,-5	-	-	8.04	MINOR
ENSMUSG00000038346	Zfp384	ENSMUST00000131555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038346	Zfp384	ENSMUST00000145138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038346	Zfp384	ENSMUST00000112424	ENSMUSP00000108043	TRANSLATION	protein_coding	-	-	5	568	32	3.55	0	154.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038346	Zfp384	ENSMUST00000112425	ENSMUSP00000108044	TRANSLATION	protein_coding	-	-	5	523	24	2.55	0.5	110.9	0	-4,-5	-	-	8.04	MINOR
ENSMUSG00000038346	Zfp384	ENSMUST00000152752	ENSMUSP00000117330	TRANSLATION	protein_coding	stop	-	3	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038346	Zfp384	ENSMUST00000088308	ENSMUSP00000085648	TRANSLATION	protein_coding	-	CCDS39631.1	5	584	32	3.55	0.5	154.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038346	Zfp384	ENSMUST00000132863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038346	Zfp384	ENSMUST00000145566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038346	Zfp384	ENSMUST00000084275	ENSMUSP00000081296	TRANSLATION	protein_coding	-	CCDS39631.1	1	584	32	3.55	0.5	154.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038346	Zfp384	ENSMUST00000137325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029736	Nobox	ENSMUST00000172554	ENSMUSP00000133353	TRANSLATION	protein_coding	start	-	3	327	0	2.25	0	73.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029736	Nobox	ENSMUST00000031749	ENSMUSP00000031749	TRANSLATION	protein_coding	-	CCDS20093.1	1	527	0	2.25	0.5	73.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029736	Nobox	ENSMUST00000183706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030048	Gkn3	ENSMUST00000032127	ENSMUSP00000032127	TRANSLATION	protein_coding	-	CCDS20320.1	1	191	0	0	0.5	75.6	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059201	Lep	ENSMUST00000069789	ENSMUSP00000067046	TRANSLATION	protein_coding	-	CCDS19955.1	1	167	0	3	3.9	227.2	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000059201	Lep	ENSMUST00000169505	ENSMUSP00000130087	TRANSLATION	protein_coding	stop	-	3	98	0	2	0	125.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000067714	Lpar5	ENSMUST00000140346	ENSMUSP00000119904	TRANSLATION	protein_coding	stop	-	2	163	0	0.64	0	85.1	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000067714	Lpar5	ENSMUST00000171989	ENSMUSP00000132511	TRANSLATION	protein_coding	-	CCDS51911.1	2	384	0	1.04	1.5	134.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067714	Lpar5	ENSMUST00000088292	ENSMUSP00000085630	TRANSLATION	protein_coding	-	CCDS51911.1	1	384	0	1.04	1.5	134.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000115507	Vmn1r24	ENSMUST00000228315	ENSMUSP00000153775	TRANSLATION	protein_coding	-	CCDS20188.1	-	296	0	0	1.5	180.8	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115507	Vmn1r24	ENSMUST00000228097	ENSMUSP00000154405	TRANSLATION	protein_coding	-	CCDS20188.1	-	296	0	0	1.5	180.8	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095771	Igkv14-111	ENSMUST00000103320	ENSMUSP00000100121	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	61.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000030209	Grin2b	ENSMUST00000198283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030209	Grin2b	ENSMUST00000188999	ENSMUSP00000140452	TRANSLATION	protein_coding	stop	-	1	36	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000030209	Grin2b	ENSMUST00000125905	ENSMUSP00000139706	TRANSLATION	protein_coding	stop	-	1	35	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000030209	Grin2b	ENSMUST00000143943	ENSMUSP00000140710	TRANSLATION	protein_coding	stop	-	1	35	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000030209	Grin2b	ENSMUST00000152012	ENSMUSP00000142696	TRANSLATION	protein_coding	-	-	1	337	0	2.6	0	45.1	0	-1,-3	-	-	0	MINOR
ENSMUSG00000030209	Grin2b	ENSMUST00000053880	ENSMUSP00000062284	TRANSLATION	protein_coding	-	CCDS20648.1	5	1482	12	11.6	5.1	1067.7	3	-1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000030209	Grin2b	ENSMUST00000111905	ENSMUSP00000107536	TRANSLATION	protein_coding	-	CCDS20648.1	5	1482	12	11.6	5.1	1067.7	3	-1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000030187	Klra2	ENSMUST00000032306	ENSMUSP00000032306	TRANSLATION	protein_coding	-	CCDS20603.1	1	288	4	3.2	0.5	224.7	1	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000030187	Klra2	ENSMUST00000088867	ENSMUSP00000086252	TRANSLATION	protein_coding	-	CCDS51929.1	5	321	4	2.7	0.5	215.7	1	-4,-6	-	-	14.458	MINOR
ENSMUSG00000094626	Tmem121b	ENSMUST00000178687	ENSMUSP00000135924	TRANSLATION	protein_coding	-	CCDS57446.1	-	572	0	0	0.5	194.4	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000030317	Timp4	ENSMUST00000205131	ENSMUSP00000144785	TRANSLATION	protein_coding	-	-	1	175	0	3.6	0	177.6	0	3,-2	-	-	7.242	MINOR
ENSMUSG00000030317	Timp4	ENSMUST00000032462	ENSMUSP00000032462	TRANSLATION	protein_coding	-	CCDS20438.1	1	224	0	4.4	7.5	230.2	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030069	Prok2	ENSMUST00000032152	ENSMUSP00000032152	TRANSLATION	protein_coding	-	CCDS20389.1	1	128	0	2.025	1.5	153	0	4,-1	-	-	10.584	MINOR
ENSMUSG00000030069	Prok2	ENSMUST00000008273	ENSMUSP00000008273	TRANSLATION	protein_coding	-	CCDS51864.1	3	65	0	1.4	0.5	45.2	0	4,-1	-	-	3.498	MINOR
ENSMUSG00000030069	Prok2	ENSMUST00000203738	ENSMUSP00000144760	TRANSLATION	protein_coding	-	-	1	86	0	1.4	0	105.1	0	4,-1	-	-	6.144	MINOR
ENSMUSG00000030069	Prok2	ENSMUST00000101120	ENSMUSP00000098678	TRANSLATION	protein_coding	-	CCDS20388.1	1	107	0	2.4	1.5	161	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000115644	Vmn1r17	ENSMUST00000228294	ENSMUSP00000153928	TRANSLATION	protein_coding	-	-	-	254	0	0	0	162.2	4	-4,-7	-	-	5.124	MINOR
ENSMUSG00000115644	Vmn1r17	ENSMUST00000227966	ENSMUSP00000154103	TRANSLATION	protein_coding	-	CCDS20180.1	-	303	0	0	1.5	176.8	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115644	Vmn1r17	ENSMUST00000228342	ENSMUSP00000154129	TRANSLATION	protein_coding	-	CCDS20180.1	-	303	0	0	1.5	176.8	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115644	Vmn1r17	ENSMUST00000228156	ENSMUSP00000154305	TRANSLATION	protein_coding	-	-	-	254	0	0	0	162.2	4	-4,-7	-	-	5.124	MINOR
ENSMUSG00000115644	Vmn1r17	ENSMUST00000227186	ENSMUSP00000154334	TRANSLATION	protein_coding	-	CCDS20180.1	-	303	0	0	1.5	176.8	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046500	Tafa4	ENSMUST00000089295	ENSMUSP00000086710	TRANSLATION	protein_coding	-	CCDS51858.1	1	135	0	0	3.5	159.3	0	2,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000046500	Tafa4	ENSMUST00000203930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064293	Cntn4	ENSMUST00000125904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000132395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000089208	ENSMUSP00000086616	TRANSLATION	protein_coding	-	CCDS51866.1	5	1026	0	19.99	6.3	390	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000064293	Cntn4	ENSMUST00000113264	ENSMUSP00000108889	TRANSLATION	protein_coding	-	CCDS51866.1	5	1026	0	19.99	6.3	390	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000064293	Cntn4	ENSMUST00000113261	ENSMUSP00000108886	TRANSLATION	protein_coding	-	CCDS20395.1	1	705	0	14.24	1.5	343.3	0	3,-2	-	-	3.386	MINOR
ENSMUSG00000064293	Cntn4	ENSMUST00000142626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000130040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000113260	ENSMUSP00000108885	TRANSLATION	protein_coding	-	CCDS20395.1	1	705	0	14.24	1.5	343.3	0	3,-2	-	-	3.386	MINOR
ENSMUSG00000064293	Cntn4	ENSMUST00000079416	ENSMUSP00000078385	TRANSLATION	protein_coding	-	-	5	714	0	14.24	0	343.3	0	3,-2	-	-	3.198	MINOR
ENSMUSG00000064293	Cntn4	ENSMUST00000204621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000132044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064293	Cntn4	ENSMUST00000123596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064293	Cntn4	ENSMUST00000113258	ENSMUSP00000108883	TRANSLATION	protein_coding	-	-	1	498	0	10.24	0	247.4	0	3,-2	-	-	0	MINOR
ENSMUSG00000043219	Hoxa6	ENSMUST00000062829	ENSMUSP00000058755	TRANSLATION	protein_coding	-	CCDS20144.1	1	232	0	1	10.8	75.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000125880	ENSMUSP00000121968	TRANSLATION	nonsense_mediated_decay	start	-	3	107	0	3	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000131434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000134803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000144524	ENSMUSP00000117470	TRANSLATION	protein_coding	start/stop	-	2	295	0	3.55	0	28.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000130257	ENSMUSP00000115991	TRANSLATION	protein_coding	stop	-	5	65	3	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030341	Tnfrsf1a	ENSMUST00000032491	ENSMUSP00000032491	TRANSLATION	protein_coding	-	CCDS20550.1	1	454	2	7.1	0.5	147.2	1	3,-2	-	-	14.001	PRINCIPAL:1
ENSMUSG00000058486	Wdr91	ENSMUST00000081214	ENSMUSP00000079974	TRANSLATION	protein_coding	-	CCDS39457.1	1	748	0	4.16	1.5	18	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058486	Wdr91	ENSMUST00000145765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058486	Wdr91	ENSMUST00000152488	ENSMUSP00000117396	TRANSLATION	protein_coding	stop	-	5	58	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058486	Wdr91	ENSMUST00000146968	ENSMUSP00000138406	TRANSLATION	nonsense_mediated_decay	-	-	5	604	0	2.3	0	16.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058486	Wdr91	ENSMUST00000149448	ENSMUSP00000120164	TRANSLATION	protein_coding	stop	-	5	196	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058486	Wdr91	ENSMUST00000134830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058486	Wdr91	ENSMUST00000133336	ENSMUSP00000120805	TRANSLATION	protein_coding	stop	-	3	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058486	Wdr91	ENSMUST00000201569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115199	Vmn1r15	ENSMUST00000228297	ENSMUSP00000154252	TRANSLATION	protein_coding	-	CCDS20178.1	-	299	0	0	1.5	184.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029865	Sval1	ENSMUST00000031898	ENSMUSP00000031898	TRANSLATION	protein_coding	-	CCDS20058.1	1	151	0	0.88	0.5	165.7	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000064262	Gimap8	ENSMUST00000078223	ENSMUSP00000077350	TRANSLATION	protein_coding	-	CCDS85043.1	1	349	23	0.8	0.5	185.3	0	-4,-7	-	-	1.848	MINOR
ENSMUSG00000064262	Gimap8	ENSMUST00000203509	ENSMUSP00000145255	TRANSLATION	protein_coding	-	CCDS20108.1	1	688	54	2.6	1.5	573.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000064262	Gimap8	ENSMUST00000203083	ENSMUSP00000145286	TRANSLATION	protein_coding	-	CCDS20108.1	1	688	54	2.6	1.5	573.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000043605	Olfr13	ENSMUST00000216179	ENSMUSP00000149893	TRANSLATION	protein_coding	-	CCDS20089.1	5	310	0	0.42	7.6	199	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043605	Olfr13	ENSMUST00000059512	ENSMUSP00000053813	TRANSLATION	protein_coding	-	CCDS20089.1	-	310	0	0.42	7.6	199	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000076573	Igkv1-35	ENSMUST00000103374	ENSMUSP00000100175	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	61.3	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076573	Igkv1-35	ENSMUST00000197820	ENSMUSP00000142338	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	61.3	0	2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000053297	AI854703	ENSMUST00000204958	ENSMUSP00000145967	TRANSLATION	protein_coding	stop	-	2	102	9	0.8	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053297	AI854703	ENSMUST00000095938	ENSMUSP00000145982	TRANSLATION	protein_coding	-	-	2	203	20	1.4	4.8	123.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000053297	AI854703	ENSMUST00000154570	ENSMUSP00000145812	TRANSLATION	protein_coding	-	-	2	203	20	1.4	4.8	123.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000053297	AI854703	ENSMUST00000203088	ENSMUSP00000145635	TRANSLATION	protein_coding	stop	-	2	102	9	0.8	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000032476	ENSMUSP00000032476	TRANSLATION	protein_coding	-	CCDS20502.1	1	493	0	10.58	1.5	543.6	14	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003153	Slc2a3	ENSMUST00000166135	ENSMUSP00000132586	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0.9	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000168704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003153	Slc2a3	ENSMUST00000170724	ENSMUSP00000128076	TRANSLATION	protein_coding	stop	-	3	89	0	2.25	0	62.7	3	-1,-4	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000171541	ENSMUSP00000131615	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000165884	ENSMUSP00000129925	TRANSLATION	protein_coding	stop	-	3	163	0	4.58	0	161.6	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000168801	ENSMUSP00000129604	TRANSLATION	protein_coding	stop	-	3	70	0	1.75	0	34	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000003153	Slc2a3	ENSMUST00000169979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079598	Clec2l	ENSMUST00000114874	ENSMUSP00000110524	TRANSLATION	protein_coding	-	CCDS57419.1	2	211	3	2.16	1.5	52.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000079598	Clec2l	ENSMUST00000238216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014551	Mrps25	ENSMUST00000014695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014551	Mrps25	ENSMUST00000140438	ENSMUSP00000114402	TRANSLATION	protein_coding	-	CCDS20373.1	1	171	0	3.75	19.5	42	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000014551	Mrps25	ENSMUST00000134132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030158	Clec12b	ENSMUST00000112082	ENSMUSP00000107713	TRANSLATION	protein_coding	-	CCDS51922.1	1	275	4	2.6	5.1	91	1	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030158	Clec12b	ENSMUST00000032261	ENSMUSP00000032261	TRANSLATION	protein_coding	-	CCDS51922.1	1	275	4	2.6	5.1	91	1	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000042279	H1f8	ENSMUST00000205177	ENSMUSP00000144958	TRANSLATION	protein_coding	start	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042279	H1f8	ENSMUST00000162084	ENSMUSP00000124090	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042279	H1f8	ENSMUST00000037831	ENSMUSP00000036951	TRANSLATION	protein_coding	-	CCDS20447.1	1	304	0	0.8	0.5	77.8	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000042279	H1f8	ENSMUST00000161617	ENSMUSP00000125701	TRANSLATION	protein_coding	stop	-	3	251	0	0.8	0	77.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042279	H1f8	ENSMUST00000161969	ENSMUSP00000123797	TRANSLATION	protein_coding	-	CCDS85133.1	1	246	0	0.8	0.5	77.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000205231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000147862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000058245	ENSMUSP00000107289	TRANSLATION	protein_coding	-	-	2	172	0	0	2.2	186.4	0	-4,-5	-	-	2.132	MINOR
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000037836	ENSMUSP00000037316	TRANSLATION	protein_coding	-	-	3	172	0	0	2.2	186.4	0	-4,-5	-	-	2.132	MINOR
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000160697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000111663	ENSMUSP00000107292	TRANSLATION	protein_coding	-	CCDS39711.1	1	253	0	0	8.8	237	0	-4,-5	-	-	6.788	MINOR
ENSMUSG00000040242	Fgfr1op2	ENSMUST00000067404	ENSMUSP00000098352	TRANSLATION	protein_coding	-	CCDS85186.1	1	215	0	0	17.3	255.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000038210	Hoxa11	ENSMUST00000048026	ENSMUSP00000040920	TRANSLATION	protein_coding	-	CCDS20148.1	1	313	0	1	3.9	285.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038210	Hoxa11	ENSMUST00000131495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030144	Clec4d	ENSMUST00000203421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030144	Clec4d	ENSMUST00000204826	ENSMUSP00000145134	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	0.4	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030144	Clec4d	ENSMUST00000032240	ENSMUSP00000032240	TRANSLATION	protein_coding	-	CCDS20513.1	1	219	9	3.9	1.5	71.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029819	Npy	ENSMUST00000031843	ENSMUSP00000031843	TRANSLATION	protein_coding	-	CCDS39488.1	1	97	0	1	10.8	68.6	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000029848	Stra8	ENSMUST00000185102	ENSMUSP00000139136	TRANSLATION	protein_coding	stop	-	3	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029848	Stra8	ENSMUST00000114999	ENSMUSP00000110651	TRANSLATION	protein_coding	-	CCDS39458.1	1	393	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000029848	Stra8	ENSMUST00000114997	ENSMUSP00000110649	TRANSLATION	protein_coding	-	-	1	282	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000029848	Stra8	ENSMUST00000031876	ENSMUSP00000031876	TRANSLATION	protein_coding	-	CCDS39458.1	1	393	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000050654	Olfr215	ENSMUST00000061723	ENSMUSP00000052425	TRANSLATION	protein_coding	-	CCDS20458.1	-	310	0	0	1.5	159.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030107	Usp18	ENSMUST00000204710	ENSMUSP00000145285	TRANSLATION	protein_coding	start	-	3	60	2	1.5	0	48.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030107	Usp18	ENSMUST00000204926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030107	Usp18	ENSMUST00000032198	ENSMUSP00000032198	TRANSLATION	protein_coding	-	CCDS20489.1	1	368	8	8.11	0.5	140	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030107	Usp18	ENSMUST00000203250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051124	Gimap9	ENSMUST00000054050	ENSMUSP00000050330	TRANSLATION	protein_coding	-	CCDS20109.1	1	291	22	2.13	1.5	268.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051124	Gimap9	ENSMUST00000147936	ENSMUSP00000122830	TRANSLATION	protein_coding	start	-	3	138	18	1	0	196.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072476	Gm9008	ENSMUST00000097218	ENSMUSP00000126976	TRANSLATION	protein_coding	-	-	-	424	8	0	1.5	45.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000032899	Styk1	ENSMUST00000049150	ENSMUSP00000044098	TRANSLATION	protein_coding	-	CCDS20604.1	1	429	2	3.835	1.5	196.6	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032899	Styk1	ENSMUST00000204371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032899	Styk1	ENSMUST00000135859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032899	Styk1	ENSMUST00000121078	ENSMUSP00000112900	TRANSLATION	protein_coding	-	-	1	340	2	3.435	0	176.9	1	-4,-7	-	-	12.02	MINOR
ENSMUSG00000032899	Styk1	ENSMUST00000145390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014704	Hoxa2	ENSMUST00000014848	ENSMUSP00000014848	TRANSLATION	protein_coding	-	CCDS20139.1	1	372	0	0.4	2.7	76.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047867	Gimap6	ENSMUST00000119315	ENSMUSP00000113918	TRANSLATION	protein_coding	-	-	1	97	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047867	Gimap6	ENSMUST00000132725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047867	Gimap6	ENSMUST00000126422	ENSMUSP00000145325	TRANSLATION	protein_coding	-	-	3	110	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047867	Gimap6	ENSMUST00000053661	ENSMUSP00000059371	TRANSLATION	protein_coding	-	CCDS20111.1	1	305	18	1	0.5	239.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000029683	Lmod2	ENSMUST00000031694	ENSMUSP00000031694	TRANSLATION	protein_coding	-	CCDS19944.1	1	550	0	1.93	1.5	57.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029918	Mrps33	ENSMUST00000201461	ENSMUSP00000144539	TRANSLATION	protein_coding	-	CCDS39464.1	2	34	0	1	0.5	0	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000029918	Mrps33	ENSMUST00000139992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029918	Mrps33	ENSMUST00000031978	ENSMUSP00000031978	TRANSLATION	protein_coding	-	CCDS20026.1	1	106	0	3	18.2	86	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000029918	Mrps33	ENSMUST00000114797	ENSMUSP00000110445	TRANSLATION	protein_coding	-	CCDS39464.1	1	34	0	1	0.5	0	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000071149	Tas2r115	ENSMUST00000095394	ENSMUSP00000093043	TRANSLATION	protein_coding	-	CCDS20619.1	-	310	0	0	0.5	277.1	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076609	Igkc	ENSMUST00000103410	ENSMUSP00000100206	TRANSLATION	IG_C_gene	start	-	-	107	0	1	0	93.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000226262	ENSMUSP00000154622	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000228647	ENSMUSP00000153720	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000226999	ENSMUSP00000153875	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000074381	ENSMUSP00000132900	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000227332	ENSMUSP00000154593	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000228498	ENSMUSP00000154665	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091012	Vmn1r34	ENSMUST00000226910	ENSMUSP00000154378	TRANSLATION	protein_coding	-	CCDS51802.1	-	309	0	0	0.5	179.4	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000014104	Sval2	ENSMUST00000014248	ENSMUSP00000014248	TRANSLATION	protein_coding	-	CCDS20057.1	1	144	0	1.33	1.5	168.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000014104	Sval2	ENSMUST00000143093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014104	Sval2	ENSMUST00000120605	ENSMUSP00000113417	TRANSLATION	protein_coding	-	-	2	105	0	1.33	0	111.7	0	-4,-5	-	-	8.598	MINOR
ENSMUSG00000014104	Sval2	ENSMUST00000119995	ENSMUSP00000113701	TRANSLATION	protein_coding	-	-	3	124	0	1.33	0	121	0	-4,-6	-	-	9.156	MINOR
ENSMUSG00000042873	Lhfpl4	ENSMUST00000203665	ENSMUSP00000144899	TRANSLATION	protein_coding	start	-	3	168	0	0	0	139.1	4	0,-4	-	-	-1	MINOR
ENSMUSG00000042873	Lhfpl4	ENSMUST00000162280	ENSMUSP00000124470	TRANSLATION	protein_coding	-	CCDS39591.1	1	247	0	0	7.5	229.5	5	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000034312	Iqsec1	ENSMUST00000204983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034312	Iqsec1	ENSMUST00000154198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034312	Iqsec1	ENSMUST00000101153	ENSMUSP00000098712	TRANSLATION	protein_coding	-	CCDS51850.1	5	961	0	7.73	3.9	424.2	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000034312	Iqsec1	ENSMUST00000133492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034312	Iqsec1	ENSMUST00000238855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034312	Iqsec1	ENSMUST00000238821	ENSMUSP00000159115	TRANSLATION	protein_coding	stop	-	-	788	0	5.33	0	273	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000034312	Iqsec1	ENSMUST00000146977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034312	Iqsec1	ENSMUST00000156834	ENSMUSP00000118802	TRANSLATION	protein_coding	stop	-	1	218	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034312	Iqsec1	ENSMUST00000212100	ENSMUSP00000148669	TRANSLATION	protein_coding	-	-	5	1051	0	7.73	0.5	424.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034312	Iqsec1	ENSMUST00000101151	ENSMUSP00000098710	TRANSLATION	protein_coding	-	CCDS51851.1	5	1099	0	7.73	0.5	424.2	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000034312	Iqsec1	ENSMUST00000205068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034312	Iqsec1	ENSMUST00000141434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079263	Gm6614	ENSMUST00000181791	ENSMUSP00000137696	TRANSLATION	protein_coding	-	CCDS39692.1	5	650	0	0	0.5	577.1	11	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000079263	Gm6614	ENSMUST00000111832	ENSMUSP00000107463	TRANSLATION	protein_coding	-	CCDS39692.1	5	650	0	0	0.5	577.1	11	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000079263	Gm6614	ENSMUST00000181628	ENSMUSP00000137967	TRANSLATION	protein_coding	-	-	5	670	0	0	0.5	577.1	11	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030030	1700003E16Rik	ENSMUST00000032106	ENSMUSP00000032106	TRANSLATION	protein_coding	-	CCDS51818.1	5	598	0	0	0.5	872.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030030	1700003E16Rik	ENSMUST00000203203	ENSMUSP00000145406	TRANSLATION	protein_coding	-	-	2	113	0	0	0	179.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000076578	Igkv6-29	ENSMUST00000197371	ENSMUSP00000142786	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.5	0	65.1	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076578	Igkv6-29	ENSMUST00000103379	ENSMUSP00000100180	TRANSLATION	IG_V_gene	stop	-	-	114	2	1.5	0	65.1	0	2,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000023367	Tmem176a	ENSMUST00000203639	ENSMUSP00000145250	TRANSLATION	protein_coding	stop	-	3	230	0	0	0	114.8	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000023367	Tmem176a	ENSMUST00000101426	ENSMUSP00000098969	TRANSLATION	protein_coding	-	CCDS39482.1	1	244	0	0	1.5	114.8	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000023367	Tmem176a	ENSMUST00000204309	ENSMUSP00000144729	TRANSLATION	protein_coding	start	-	5	44	0	0	0	29.1	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000023367	Tmem176a	ENSMUST00000204400	ENSMUSP00000145268	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023367	Tmem176a	ENSMUST00000203461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023367	Tmem176a	ENSMUST00000204482	ENSMUSP00000145101	TRANSLATION	nonsense_mediated_decay	-	-	2	244	0	0	1.5	114.8	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000023367	Tmem176a	ENSMUST00000168406	ENSMUSP00000131775	TRANSLATION	protein_coding	-	CCDS39482.1	3	244	0	0	1.5	114.8	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000054966	Lmntd1	ENSMUST00000148739	ENSMUSP00000120740	TRANSLATION	nonsense_mediated_decay	-	-	1	267	0	1.6	0	55.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000054966	Lmntd1	ENSMUST00000111706	ENSMUSP00000107335	TRANSLATION	protein_coding	-	-	1	363	0	1.6	0.5	56	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000054966	Lmntd1	ENSMUST00000111708	ENSMUSP00000107337	TRANSLATION	protein_coding	-	CCDS20695.1	1	413	0	1.6	1.5	56	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000054966	Lmntd1	ENSMUST00000144829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054966	Lmntd1	ENSMUST00000149666	ENSMUSP00000123226	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054966	Lmntd1	ENSMUST00000142122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068299	Nat8f4	ENSMUST00000095757	ENSMUSP00000093430	TRANSLATION	protein_coding	-	CCDS39540.1	1	226	22	0.68	1.5	51.9	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000068299	Nat8f4	ENSMUST00000159755	ENSMUSP00000124071	TRANSLATION	protein_coding	-	CCDS51831.1	2	136	0	0.2	0.5	0	1	-4,-7	-	-	1.764	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000203714	ENSMUSP00000145273	TRANSLATION	protein_coding	stop	-	5	75	0	1.16	0	49.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000126292	ENSMUSP00000122401	TRANSLATION	protein_coding	stop	-	3	77	0	1.16	0	49.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000141600	ENSMUSP00000122762	TRANSLATION	protein_coding	stop	-	2	32	0	0.36	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000122981	ENSMUSP00000119115	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000154290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029804	Herc3	ENSMUST00000204196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029804	Herc3	ENSMUST00000205139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029804	Herc3	ENSMUST00000041401	ENSMUSP00000040025	TRANSLATION	protein_coding	-	CCDS20196.1	1	1050	6	13.438	14.8	576.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000029804	Herc3	ENSMUST00000031823	ENSMUSP00000031823	TRANSLATION	protein_coding	-	-	1	913	4	10.838	0	385.7	0	-4,-6	-	-	4.8	MINOR
ENSMUSG00000029804	Herc3	ENSMUST00000122908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029804	Herc3	ENSMUST00000131132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029804	Herc3	ENSMUST00000204629	ENSMUSP00000145319	TRANSLATION	protein_coding	start	-	5	97	1	2.08	0	60.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029833	Trim24	ENSMUST00000149828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029833	Trim24	ENSMUST00000153004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029833	Trim24	ENSMUST00000135387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029833	Trim24	ENSMUST00000120428	ENSMUSP00000113063	TRANSLATION	protein_coding	-	CCDS71751.1	1	1017	20	4.55	0.5	145.5	0	-3,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000029833	Trim24	ENSMUST00000149561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029833	Trim24	ENSMUST00000123007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029833	Trim24	ENSMUST00000120238	ENSMUSP00000114001	TRANSLATION	protein_coding	-	CCDS71752.1	1	981	17	4.55	0.5	145.5	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000029833	Trim24	ENSMUST00000031859	ENSMUSP00000031859	TRANSLATION	protein_coding	-	CCDS20008.1	1	1051	20	4.55	0.5	145.5	0	-3,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000076485	Trbj1-3	ENSMUST00000103286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076485	Trbj1-3	ENSMUST00000192366	ENSMUSP00000141903	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034639	Setmar	ENSMUST00000138140	ENSMUSP00000145263	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034639	Setmar	ENSMUST00000049246	ENSMUSP00000048225	TRANSLATION	protein_coding	-	CCDS51867.1	1	309	29	1.64	0.5	118.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047102	Tas2r139	ENSMUST00000057686	ENSMUSP00000062919	TRANSLATION	protein_coding	-	CCDS20061.1	-	319	0	0	1.5	210.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000047203	Vmn1r54	ENSMUST00000226921	ENSMUSP00000154354	TRANSLATION	protein_coding	-	CCDS20356.1	-	315	0	0	0.5	305.9	6	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000047203	Vmn1r54	ENSMUST00000058039	ENSMUSP00000063052	TRANSLATION	protein_coding	-	CCDS20356.1	-	315	0	0	0.5	305.9	6	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000014543	Klra17	ENSMUST00000122219	ENSMUSP00000114108	TRANSLATION	protein_coding	-	CCDS39664.1	1	273	4	4	0.5	246.4	1	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000014543	Klra17	ENSMUST00000014687	ENSMUSP00000014687	TRANSLATION	protein_coding	-	CCDS39664.1	1	273	4	4	0.5	246.4	1	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000035199	Arl6ip5	ENSMUST00000044681	ENSMUSP00000041503	TRANSLATION	protein_coding	-	CCDS20384.1	1	188	0	0	11.5	132.6	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000094491	Igkv1-133	ENSMUST00000103304	ENSMUSP00000100105	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	57.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000029569	Tmem168	ENSMUST00000031554	ENSMUSP00000031554	TRANSLATION	protein_coding	-	CCDS19915.1	1	697	0	0	9.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000029569	Tmem168	ENSMUST00000146139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029569	Tmem168	ENSMUST00000138637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029569	Tmem168	ENSMUST00000127050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029569	Tmem168	ENSMUST00000155179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029569	Tmem168	ENSMUST00000140750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029569	Tmem168	ENSMUST00000149123	ENSMUSP00000145372	TRANSLATION	protein_coding	-	-	1	313	0	0	2.9	0	0	-3,-7	-	-	0.672	MINOR
ENSMUSG00000029915	Clec5a	ENSMUST00000031975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029915	Clec5a	ENSMUST00000129948	ENSMUSP00000121848	TRANSLATION	protein_coding	-	CCDS20036.1	1	190	2	3.48	1.5	60.9	3	1,-4	-	-	14	PRINCIPAL:4
ENSMUSG00000029915	Clec5a	ENSMUST00000177178	ENSMUSP00000135240	TRANSLATION	protein_coding	-	-	1	164	2	3.48	2.7	52.8	3	0,-4	-	-	13.202	ALTERNATIVE:2
ENSMUSG00000029915	Clec5a	ENSMUST00000101491	ENSMUSP00000099030	TRANSLATION	protein_coding	-	CCDS20037.1	1	165	2	3.48	2.7	60.9	3	0,-4	-	-	14	ALTERNATIVE:2
ENSMUSG00000030000	Add2	ENSMUST00000203196	ENSMUSP00000145104	TRANSLATION	protein_coding	-	CCDS85085.1	1	562	3	3.35	1.5	127.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000030000	Add2	ENSMUST00000032069	ENSMUSP00000032069	TRANSLATION	protein_coding	-	CCDS20308.1	1	725	3	3.35	1.5	127.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000030000	Add2	ENSMUST00000203529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030000	Add2	ENSMUST00000205034	ENSMUSP00000145034	TRANSLATION	protein_coding	-	CCDS85085.1	1	562	3	3.35	1.5	127.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000030000	Add2	ENSMUST00000203724	ENSMUSP00000145296	TRANSLATION	protein_coding	-	CCDS20308.1	1	725	3	3.35	1.5	127.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000030000	Add2	ENSMUST00000203366	ENSMUSP00000144849	TRANSLATION	protein_coding	-	CCDS85085.1	5	562	3	3.35	1.5	127.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000030000	Add2	ENSMUST00000203786	ENSMUSP00000144694	TRANSLATION	protein_coding	-	CCDS20308.1	1	725	3	3.35	1.5	127.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000030000	Add2	ENSMUST00000204059	ENSMUSP00000145160	TRANSLATION	protein_coding	-	CCDS20308.1	1	725	3	3.35	1.5	127.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000030000	Add2	ENSMUST00000203445	ENSMUSP00000145494	TRANSLATION	protein_coding	stop	-	3	184	0	0	0	22.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030000	Add2	ENSMUST00000203279	ENSMUSP00000145452	TRANSLATION	protein_coding	-	-	2	477	2	2.55	0	86	0	-4,-5	-	-	9.885	MINOR
ENSMUSG00000093376	Vmn1r23	ENSMUST00000175817	ENSMUSP00000135676	TRANSLATION	protein_coding	-	CCDS39498.1	-	302	0	0	1.5	188.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059022	Kcp	ENSMUST00000161655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059022	Kcp	ENSMUST00000161276	ENSMUSP00000125716	TRANSLATION	nonsense_mediated_decay	start	-	1	19	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000159479	ENSMUSP00000124771	TRANSLATION	nonsense_mediated_decay	start	-	1	359	0	0	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000091391	ENSMUSP00000088954	TRANSLATION	nonsense_mediated_decay	-	-	2	1254	0	1.5	0	384.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000160181	ENSMUSP00000125699	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0.5	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000159482	ENSMUSP00000158862	TRANSLATION	protein_coding	start	-	1	728	0	0	0	121.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000101614	ENSMUSP00000099135	TRANSLATION	protein_coding	-	CCDS57415.1	1	1550	0	1.5	0.5	552.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000059022	Kcp	ENSMUST00000162959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059022	Kcp	ENSMUST00000161237	ENSMUSP00000124097	TRANSLATION	nonsense_mediated_decay	-	-	5	165	0	0.6	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000059022	Kcp	ENSMUST00000078112	ENSMUSP00000077251	TRANSLATION	protein_coding	-	-	5	1255	0	1.5	0	384.3	0	3,-2	-	-	6	MINOR
ENSMUSG00000030037	Mrpl53	ENSMUST00000129656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030037	Mrpl53	ENSMUST00000113938	ENSMUSP00000109571	TRANSLATION	protein_coding	-	CCDS20272.1	1	118	0	3	0.5	58.2	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059411	Olfr434	ENSMUST00000215485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059411	Olfr434	ENSMUST00000216562	ENSMUSP00000149678	TRANSLATION	protein_coding	-	CCDS20091.1	5	321	0	0.42	1.5	207.7	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059411	Olfr434	ENSMUST00000076752	ENSMUSP00000076039	TRANSLATION	protein_coding	-	CCDS20091.1	-	321	0	0.42	1.5	207.7	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068011	Mkrn2os	ENSMUST00000088962	ENSMUSP00000086356	TRANSLATION	nonsense_mediated_decay	-	-	1	76	3	0	0	74.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068011	Mkrn2os	ENSMUST00000112957	ENSMUSP00000108580	TRANSLATION	protein_coding	-	CCDS51877.1	2	217	3	0	0.5	235.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000038058	Nod1	ENSMUST00000205242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038058	Nod1	ENSMUST00000168172	ENSMUSP00000130487	TRANSLATION	protein_coding	-	CCDS20160.1	1	953	8	9.39	1.5	278.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038058	Nod1	ENSMUST00000203837	ENSMUSP00000145005	TRANSLATION	protein_coding	stop	-	2	52	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038058	Nod1	ENSMUST00000203076	ENSMUSP00000145123	TRANSLATION	protein_coding	start/stop	-	5	257	0	4.78	0	65.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038058	Nod1	ENSMUST00000060655	ENSMUSP00000055747	TRANSLATION	protein_coding	-	CCDS20160.1	1	953	8	9.39	1.5	278.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038058	Nod1	ENSMUST00000203916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094553	Vmn1r50	ENSMUST00000226577	ENSMUSP00000154560	TRANSLATION	protein_coding	-	CCDS20352.1	-	310	0	0	1.5	449.3	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094553	Vmn1r50	ENSMUST00000081706	ENSMUSP00000080407	TRANSLATION	protein_coding	-	CCDS20352.1	-	310	0	0	1.5	449.3	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094553	Vmn1r50	ENSMUST00000089417	ENSMUSP00000100705	TRANSLATION	protein_coding	-	CCDS20352.1	2	310	0	0	1.5	449.3	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052419	2610001J05Rik	ENSMUST00000185219	ENSMUSP00000140155	TRANSLATION	protein_coding	-	-	-	59	0	0	4.8	94	1	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000052419	2610001J05Rik	ENSMUST00000185361	ENSMUSP00000139650	TRANSLATION	protein_coding	-	-	3	59	0	0	4.8	94	1	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000052419	2610001J05Rik	ENSMUST00000155856	ENSMUSP00000120110	TRANSLATION	protein_coding	-	-	1	59	0	0	4.8	94	1	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000052419	2610001J05Rik	ENSMUST00000139231	ENSMUSP00000116702	TRANSLATION	protein_coding	-	-	1	59	0	0	4.8	94	1	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000015189	Casd1	ENSMUST00000141359	ENSMUSP00000115427	TRANSLATION	protein_coding	start/stop	-	3	182	2	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000015189	Casd1	ENSMUST00000015333	ENSMUSP00000015333	TRANSLATION	protein_coding	-	CCDS19896.1	1	797	4	0	3.7	718.3	10	-2,0	-	-	11	PRINCIPAL:1
ENSMUSG00000015189	Casd1	ENSMUST00000153963	ENSMUSP00000145445	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000015189	Casd1	ENSMUST00000181734	ENSMUSP00000137822	TRANSLATION	protein_coding	-	-	5	220	2	0	0	0	0	-2,0	-	-	2	MINOR
ENSMUSG00000015189	Casd1	ENSMUST00000204372	ENSMUSP00000145371	TRANSLATION	protein_coding	start/stop	-	3	132	0	0	0	99.7	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000047013	Fbxo41	ENSMUST00000159062	ENSMUSP00000125671	TRANSLATION	protein_coding	-	CCDS20296.1	1	873	4	0	5.1	34.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047013	Fbxo41	ENSMUST00000161078	ENSMUSP00000124524	TRANSLATION	protein_coding	-	CCDS20296.1	1	873	4	0	5.1	34.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047013	Fbxo41	ENSMUST00000161546	ENSMUSP00000124754	TRANSLATION	protein_coding	-	CCDS20296.1	1	873	4	0	5.1	34.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079343	C1s2	ENSMUST00000068797	ENSMUSP00000066999	TRANSLATION	protein_coding	-	-	1	688	19	9.5	0	429.6	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000079343	C1s2	ENSMUST00000218020	ENSMUSP00000151642	TRANSLATION	protein_coding	-	CCDS20522.2	1	694	19	9.5	1.5	429.6	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000040102	Klhl42	ENSMUST00000036003	ENSMUSP00000042558	TRANSLATION	protein_coding	-	CCDS39716.1	1	493	0	1.36	2.8	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040102	Klhl42	ENSMUST00000203866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040102	Klhl42	ENSMUST00000203441	ENSMUSP00000145444	TRANSLATION	nonsense_mediated_decay	start	-	3	17	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091382	Vmn1r18	ENSMUST00000228574	ENSMUSP00000154497	TRANSLATION	protein_coding	-	CCDS20181.1	-	299	0	0	1.5	196.7	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091382	Vmn1r18	ENSMUST00000164732	ENSMUSP00000129827	TRANSLATION	protein_coding	-	CCDS20181.1	-	299	0	0	1.5	196.7	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000012535	Tnpo3	ENSMUST00000115251	ENSMUSP00000110906	TRANSLATION	protein_coding	-	CCDS85023.1	5	929	0	20.585	0.5	93.9	0	-4,-6	-	-	11.67	MINOR
ENSMUSG00000012535	Tnpo3	ENSMUST00000012679	ENSMUSP00000012679	TRANSLATION	protein_coding	-	CCDS19963.1	1	923	0	20.75	11	93.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000012535	Tnpo3	ENSMUST00000170350	ENSMUSP00000131411	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012535	Tnpo3	ENSMUST00000166844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012535	Tnpo3	ENSMUST00000170647	ENSMUSP00000133115	TRANSLATION	protein_coding	start	-	1	247	0	5.335	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012535	Tnpo3	ENSMUST00000170634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012535	Tnpo3	ENSMUST00000171865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012535	Tnpo3	ENSMUST00000167056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012535	Tnpo3	ENSMUST00000201797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012535	Tnpo3	ENSMUST00000169302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012535	Tnpo3	ENSMUST00000164325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034832	Tet3	ENSMUST00000190295	ENSMUSP00000139679	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034832	Tet3	ENSMUST00000205921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034832	Tet3	ENSMUST00000089622	ENSMUSP00000087049	TRANSLATION	protein_coding	-	CCDS51820.1	5	1668	0	7	1.5	349.3	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000034832	Tet3	ENSMUST00000186548	ENSMUSP00000139630	TRANSLATION	protein_coding	-	CCDS85071.1	1	1803	8	8	1.5	349.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034832	Tet3	ENSMUST00000056191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076608	Igkj5	ENSMUST00000199459	ENSMUSP00000142377	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076608	Igkj5	ENSMUST00000103409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057163	Prss2	ENSMUST00000070380	ENSMUSP00000065393	TRANSLATION	protein_coding	-	CCDS20050.1	1	246	21	4.5	15.1	274	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000002870	Mcm2	ENSMUST00000204365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002870	Mcm2	ENSMUST00000204393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002870	Mcm2	ENSMUST00000205165	ENSMUSP00000145295	TRANSLATION	nonsense_mediated_decay	start	-	3	90	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002870	Mcm2	ENSMUST00000203935	ENSMUSP00000145337	TRANSLATION	nonsense_mediated_decay	start	-	5	34	6	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002870	Mcm2	ENSMUST00000203172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002870	Mcm2	ENSMUST00000058011	ENSMUSP00000061923	TRANSLATION	protein_coding	-	CCDS39554.1	1	904	14	11.764	5.3	709.4	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000002870	Mcm2	ENSMUST00000204217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030315	Vgll4	ENSMUST00000139640	ENSMUSP00000118618	TRANSLATION	protein_coding	stop	-	2	188	0	0	0	217.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030315	Vgll4	ENSMUST00000152710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030315	Vgll4	ENSMUST00000032459	ENSMUSP00000032459	TRANSLATION	protein_coding	-	CCDS20436.1	1	287	0	1.8	1.5	313.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030315	Vgll4	ENSMUST00000123478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030315	Vgll4	ENSMUST00000155620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030315	Vgll4	ENSMUST00000204693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030315	Vgll4	ENSMUST00000147639	ENSMUSP00000123139	TRANSLATION	protein_coding	stop	-	1	230	0	1	0	278.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076523	Igkv15-103	ENSMUST00000103324	ENSMUSP00000100125	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	64	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076495	Trbj2-4	ENSMUST00000103296	ENSMUSP00000142246	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000098715	Gm28053	ENSMUST00000204408	ENSMUSP00000145065	TRANSLATION	protein_coding,RT	-	-	2	40	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000098715	Gm28053	ENSMUST00000204317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098715	Gm28053	ENSMUST00000127537	ENSMUSP00000116007	TRANSLATION	protein_coding,RT	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079652	Fam71f2	ENSMUST00000115286	ENSMUSP00000110941	TRANSLATION	protein_coding	-	CCDS51735.1	1	297	0	0	1.5	91.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079652	Fam71f2	ENSMUST00000167131	ENSMUSP00000132049	TRANSLATION	protein_coding	stop	-	3	176	0	0	0	91.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079652	Fam71f2	ENSMUST00000167608	ENSMUSP00000125895	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096010	H4f16	ENSMUST00000179285	ENSMUSP00000136357	TRANSLATION	protein_coding	-	CCDS39684.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073002	Vamp5	ENSMUST00000074231	ENSMUSP00000073852	TRANSLATION	protein_coding	-	CCDS39513.1	1	102	0	1.45	1.5	87.6	2	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073002	Vamp5	ENSMUST00000206154	ENSMUSP00000145880	TRANSLATION	protein_coding	-	-	1	83	0	0.95	0	67.3	2	-4,-6	-	-	8.538	MINOR
ENSMUSG00000073002	Vamp5	ENSMUST00000101285	ENSMUSP00000098843	TRANSLATION	protein_coding	-	CCDS39513.1	1	102	0	1.45	1.5	87.6	2	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029882	2210010C04Rik	ENSMUST00000031931	ENSMUSP00000031931	TRANSLATION	protein_coding	-	CCDS20043.1	1	247	24	4.5	14.1	271.4	0	3,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000030029	Lrig1	ENSMUST00000203876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030029	Lrig1	ENSMUST00000150811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030029	Lrig1	ENSMUST00000124165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030029	Lrig1	ENSMUST00000101126	ENSMUSP00000098686	TRANSLATION	protein_coding	-	CCDS20380.1	1	1091	0	13.55	0.5	476.1	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030029	Lrig1	ENSMUST00000032105	ENSMUSP00000032105	TRANSLATION	protein_coding	-	CCDS20380.1	1	1091	0	13.55	0.5	476.1	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030029	Lrig1	ENSMUST00000141014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030029	Lrig1	ENSMUST00000204645	ENSMUSP00000144963	TRANSLATION	nonsense_mediated_decay	-	-	1	1091	0	13.55	0.5	476.1	1	3,-2	-	-	-1	MINOR
ENSMUSG00000079511	Gm42688	ENSMUST00000101253	ENSMUSP00000098811	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	673	0	0	0	566.5	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000094145	Vmn2r20	ENSMUST00000172199	ENSMUSP00000129145	TRANSLATION	protein_coding	-	CCDS51898.1	5	853	5	3.1	0.5	398.2	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000094145	Vmn2r20	ENSMUST00000232807	ENSMUSP00000156851	TRANSLATION	nonsense_mediated_decay	-	-	-	562	5	2.62	0	177.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000076577	Igkv8-30	ENSMUST00000103378	ENSMUSP00000100179	TRANSLATION	IG_V_gene	stop	-	-	121	2	1.5	0	67.6	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000051695	Pcbp1	ENSMUST00000053015	ENSMUSP00000054863	TRANSLATION	protein_coding	-	CCDS20314.1	-	356	0	1	6.5	181.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096525	Gm2663	ENSMUST00000166306	ENSMUSP00000130465	TRANSLATION	protein_coding	-	CCDS51756.1	1	247	22	4.5	4	257.9	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000115253	Vmn1r20	ENSMUST00000227909	ENSMUSP00000153815	TRANSLATION	protein_coding	-	CCDS51795.1	-	303	0	0	1.5	169.5	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115253	Vmn1r20	ENSMUST00000226808	ENSMUSP00000153909	TRANSLATION	protein_coding	-	CCDS51795.1	-	303	0	0	1.5	169.5	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076570	Igkv12-38	ENSMUST00000103371	ENSMUSP00000100172	TRANSLATION	IG_V_gene	stop	-	-	114	2	1.15	0	64	0	2,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076570	Igkv12-38	ENSMUST00000198880	ENSMUSP00000142787	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.15	0	64	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000030235	Slco1c1	ENSMUST00000135562	ENSMUSP00000138093	TRANSLATION	nonsense_mediated_decay	-	-	1	469	0	0	0	443.9	17	-4,-5	-	-	-1	MINOR
ENSMUSG00000030235	Slco1c1	ENSMUST00000032362	ENSMUSP00000032362	TRANSLATION	protein_coding	-	CCDS20677.1	1	715	0	0	1.5	632.4	25	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030235	Slco1c1	ENSMUST00000203140	ENSMUSP00000145058	TRANSLATION	protein_coding	-	-	5	544	0	0	0	518.5	20	-4,-6	-	-	0	MINOR
ENSMUSG00000030235	Slco1c1	ENSMUST00000205214	ENSMUSP00000144889	TRANSLATION	protein_coding	-	-	5	666	0	0	0	434.2	23	-4,-5	-	-	0	MINOR
ENSMUSG00000030235	Slco1c1	ENSMUST00000204998	ENSMUSP00000145342	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030235	Slco1c1	ENSMUST00000203755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029813	Doxl1	ENSMUST00000031837	ENSMUSP00000031837	TRANSLATION	protein_coding	-	CCDS39484.2	1	711	16	4	0.5	431	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030031	Kbtbd8	ENSMUST00000145387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030031	Kbtbd8	ENSMUST00000032107	ENSMUSP00000032107	TRANSLATION	protein_coding	-	CCDS51856.1	1	599	0	2.22	7.5	292.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030031	Kbtbd8	ENSMUST00000119582	ENSMUSP00000113739	TRANSLATION	protein_coding	-	CCDS51857.1	1	522	0	1.42	5.3	243.5	0	-4,-5	-	-	8.868	MINOR
ENSMUSG00000030031	Kbtbd8	ENSMUST00000122938	ENSMUSP00000145009	TRANSLATION	protein_coding	stop	-	3	142	0	1.6	0	77.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030120	Mlf2	ENSMUST00000203060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030120	Mlf2	ENSMUST00000204534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030120	Mlf2	ENSMUST00000032214	ENSMUSP00000032214	TRANSLATION	protein_coding	-	CCDS20538.1	1	247	0	0	12.8	218.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030120	Mlf2	ENSMUST00000203021	ENSMUSP00000145163	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	61.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030120	Mlf2	ENSMUST00000180095	ENSMUSP00000135920	TRANSLATION	protein_coding	-	CCDS20538.1	1	247	0	0	12.8	218.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030120	Mlf2	ENSMUST00000203133	ENSMUSP00000145283	TRANSLATION	protein_coding	stop	-	2	116	0	0	0	56.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030120	Mlf2	ENSMUST00000204177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030120	Mlf2	ENSMUST00000204815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000138388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030270	Cpne9	ENSMUST00000128148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000041203	ENSMUSP00000044416	TRANSLATION	protein_coding	-	CCDS20413.1	5	553	9	2.9	6.3	384.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030270	Cpne9	ENSMUST00000124574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000134523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000204050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000132372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030270	Cpne9	ENSMUST00000136728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030270	Cpne9	ENSMUST00000130191	ENSMUSP00000138786	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030270	Cpne9	ENSMUST00000155779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049001	Ndnf	ENSMUST00000169795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049001	Ndnf	ENSMUST00000054351	ENSMUSP00000051297	TRANSLATION	protein_coding	-	CCDS20207.1	1	568	0	0	4.2	101.8	0	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000043496	Tril	ENSMUST00000127748	ENSMUSP00000116056	TRANSLATION	protein_coding	-	CCDS51776.1	-	809	0	0.28	0.5	234.6	0	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000030216	Wbp11	ENSMUST00000141598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030216	Wbp11	ENSMUST00000116514	ENSMUSP00000112213	TRANSLATION	protein_coding	-	CCDS20655.1	1	641	0	0	0.5	85.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030216	Wbp11	ENSMUST00000151333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030216	Wbp11	ENSMUST00000129078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030216	Wbp11	ENSMUST00000204129	ENSMUSP00000144977	TRANSLATION	protein_coding	start/stop	-	1	143	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030216	Wbp11	ENSMUST00000146348	ENSMUSP00000145155	TRANSLATION	protein_coding	stop	-	5	32	0	0	2	33	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030216	Wbp11	ENSMUST00000204272	ENSMUSP00000145501	TRANSLATION	nonsense_mediated_decay	-	-	5	194	0	0	0	85.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034023	Fancd2	ENSMUST00000143535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034023	Fancd2	ENSMUST00000123738	ENSMUSP00000122091	TRANSLATION	protein_coding	start/stop	-	3	246	0	6.085	0	388.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034023	Fancd2	ENSMUST00000129462	ENSMUSP00000145220	TRANSLATION	nonsense_mediated_decay	start	-	3	84	0	1	0	90.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034023	Fancd2	ENSMUST00000124262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034023	Fancd2	ENSMUST00000101051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034023	Fancd2	ENSMUST00000142453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034023	Fancd2	ENSMUST00000204827	ENSMUSP00000144928	TRANSLATION	protein_coding	-	CCDS85123.1	1	1437	0	34.375	0.5	2445.9	0	-4,-5	-	-	7.77	MINOR
ENSMUSG00000034023	Fancd2	ENSMUST00000036340	ENSMUSP00000045667	TRANSLATION	protein_coding	-	CCDS20426.1	1	1450	0	34.875	0.5	2499.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029685	Asb15	ENSMUST00000031696	ENSMUSP00000031696	TRANSLATION	protein_coding	-	CCDS19943.1	1	583	0	4.34	1.5	157.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029685	Asb15	ENSMUST00000117688	ENSMUSP00000112965	TRANSLATION	protein_coding	-	CCDS19943.1	5	583	0	4.34	1.5	157.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030160	Tmem52b	ENSMUST00000204741	ENSMUSP00000145486	TRANSLATION	protein_coding	-	-	1	40	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030160	Tmem52b	ENSMUST00000203160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030160	Tmem52b	ENSMUST00000032263	ENSMUSP00000032263	TRANSLATION	protein_coding	-	CCDS39659.1	1	186	0	0	0.5	199	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030160	Tmem52b	ENSMUST00000204692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010797	Wnt2	ENSMUST00000010941	ENSMUSP00000010941	TRANSLATION	protein_coding	-	CCDS19928.1	1	360	0	2.46	7.5	411.1	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030214	Plbd1	ENSMUST00000032336	ENSMUSP00000032336	TRANSLATION	protein_coding	-	CCDS20652.1	1	550	0	9.75	0.5	651.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030214	Plbd1	ENSMUST00000137139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030214	Plbd1	ENSMUST00000133911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043088	Il17re	ENSMUST00000053569	ENSMUSP00000054378	TRANSLATION	protein_coding	-	CCDS20421.1	1	436	0	0.54	0.5	394.2	1	-4,-5	-	-	6.408	MINOR
ENSMUSG00000043088	Il17re	ENSMUST00000203897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043088	Il17re	ENSMUST00000205211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043088	Il17re	ENSMUST00000058548	ENSMUSP00000062103	TRANSLATION	protein_coding	-	CCDS20420.1	1	637	0	0.54	1.5	487.4	1	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000043088	Il17re	ENSMUST00000203281	ENSMUSP00000145363	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000043088	Il17re	ENSMUST00000101065	ENSMUSP00000098626	TRANSLATION	protein_coding	-	CCDS20421.1	1	436	0	0.54	0.5	394.2	1	-4,-5	-	-	6.408	MINOR
ENSMUSG00000043088	Il17re	ENSMUST00000203661	ENSMUSP00000145345	TRANSLATION	protein_coding	-	-	1	591	0	0.24	0	476.3	0	3,-2	-	-	7.998	MINOR
ENSMUSG00000043088	Il17re	ENSMUST00000204774	ENSMUSP00000145384	TRANSLATION	protein_coding	-	-	1	617	0	0.54	0	487.4	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000043088	Il17re	ENSMUST00000204523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060882	Kcnd2	ENSMUST00000081542	ENSMUSP00000080257	TRANSLATION	protein_coding	-	CCDS19934.1	1	630	0	1.8	12.8	430.3	0	0,0	-	-	16	PRINCIPAL:1
ENSMUSG00000050732	Vamp8	ENSMUST00000059983	ENSMUSP00000059501	TRANSLATION	protein_coding	-	CCDS39514.1	1	101	0	2.5	8.8	111.8	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050732	Vamp8	ENSMUST00000142613	ENSMUSP00000145955	TRANSLATION	protein_coding	-	-	1	75	0	1.75	0	90.8	1	-4,-5	-	-	8.94	MINOR
ENSMUSG00000090667	Gm765	ENSMUST00000204914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090667	Gm765	ENSMUST00000164491	ENSMUSP00000127120	TRANSLATION	protein_coding	-	CCDS51863.1	1	189	0	0	1.5	159.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068181	Gm10234	ENSMUST00000089304	ENSMUSP00000086718	TRANSLATION	protein_coding	start/stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000033508	Asprv1	ENSMUST00000043400	ENSMUSP00000046121	TRANSLATION	protein_coding	-	CCDS39542.1	-	339	1	0	0.5	42.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000058979	Hdhd5	ENSMUST00000204390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058979	Hdhd5	ENSMUST00000075303	ENSMUSP00000074775	TRANSLATION	protein_coding	-	CCDS20483.1	1	419	7	2.8932	1.5	91.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000058979	Hdhd5	ENSMUST00000125666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058979	Hdhd5	ENSMUST00000141029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030357	Fkbp4	ENSMUST00000150387	ENSMUSP00000119930	TRANSLATION	protein_coding	stop	-	5	260	3	6.33	0	156.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030357	Fkbp4	ENSMUST00000139448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030357	Fkbp4	ENSMUST00000032508	ENSMUSP00000032508	TRANSLATION	protein_coding	-	CCDS20573.1	1	458	3	10.83	6.3	212.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000030357	Fkbp4	ENSMUST00000151796	ENSMUSP00000122087	TRANSLATION	protein_coding	stop	-	3	187	3	4.33	0	140.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076571	Igkv5-37	ENSMUST00000103372	ENSMUSP00000100173	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.5	0	56.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076467	Trbv13-1	ENSMUST00000194399	ENSMUSP00000142225	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	51.8	0	4,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076467	Trbv13-1	ENSMUST00000103268	ENSMUSP00000100084	TRANSLATION	TR_V_gene	stop	-	-	111	0	1	0	51.8	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000030084	Plxna1	ENSMUST00000205230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030084	Plxna1	ENSMUST00000049845	ENSMUSP00000063066	TRANSLATION	protein_coding	-	CCDS20344.1	1	1894	0	30.8	0.5	1309.5	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030084	Plxna1	ENSMUST00000204468	ENSMUSP00000144822	TRANSLATION	nonsense_mediated_decay	start	-	3	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030084	Plxna1	ENSMUST00000163139	ENSMUSP00000131840	TRANSLATION	protein_coding	-	CCDS20344.1	1	1894	0	30.8	0.5	1309.5	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030084	Plxna1	ENSMUST00000204997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030084	Plxna1	ENSMUST00000205121	ENSMUSP00000145403	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000179873	ENSMUSP00000136167	TRANSLATION	protein_coding	-	CCDS20715.1	3	255	20	1.74	1.5	33.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039958	Etfbkmt	ENSMUST00000047531	ENSMUSP00000042102	TRANSLATION	protein_coding	-	CCDS20715.1	1	255	20	1.74	1.5	33.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039958	Etfbkmt	ENSMUST00000134306	ENSMUSP00000118701	TRANSLATION	protein_coding	stop	-	5	160	11	1.6	0	23.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000147934	ENSMUSP00000144830	TRANSLATION	protein_coding	-	CCDS85191.1	1	128	13	0.94	0.5	0	0	-4,-5	-	-	4.572	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000111551	ENSMUSP00000107176	TRANSLATION	protein_coding	-	CCDS20715.1	1	255	20	1.74	1.5	33.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039958	Etfbkmt	ENSMUST00000126406	ENSMUSP00000115172	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000111548	ENSMUSP00000107173	TRANSLATION	protein_coding	-	-	1	150	0	0.2	0	0	0	-4,-2	-	-	0.69	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000166416	ENSMUSP00000126521	TRANSLATION	protein_coding	stop	-	3	165	11	1.6	0	23.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039958	Etfbkmt	ENSMUST00000111547	ENSMUSP00000107171	TRANSLATION	protein_coding	-	-	1	150	0	0.2	0	0	0	-4,-2	-	-	0.69	MINOR
ENSMUSG00000029771	Irf5	ENSMUST00000163511	ENSMUSP00000127021	TRANSLATION	protein_coding	-	CCDS19962.1	1	497	0	7.45	1.5	368.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029771	Irf5	ENSMUST00000164922	ENSMUSP00000145299	TRANSLATION	protein_coding	start/stop	-	5	134	0	2.05	0	97.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029771	Irf5	ENSMUST00000167252	ENSMUSP00000126273	TRANSLATION	protein_coding	-	CCDS80504.1	1	494	0	6.65	0.5	368.2	0	-4,-7	-	-	10.398	MINOR
ENSMUSG00000029771	Irf5	ENSMUST00000004392	ENSMUSP00000004392	TRANSLATION	protein_coding	-	CCDS19962.1	1	497	0	7.45	1.5	368.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029771	Irf5	ENSMUST00000171527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029771	Irf5	ENSMUST00000164626	ENSMUSP00000130548	TRANSLATION	protein_coding	stop	-	3	80	0	2.05	0	77.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023964	Calcr	ENSMUST00000170266	ENSMUSP00000132124	TRANSLATION	protein_coding	-	CCDS39417.1	1	533	0	6.45	1.5	359.2	9	1,-3	-	-	10.794	MINOR
ENSMUSG00000023964	Calcr	ENSMUST00000171613	ENSMUSP00000130083	TRANSLATION	protein_coding	-	CCDS39416.1	1	496	0	6.95	1.5	362.6	9	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000023964	Calcr	ENSMUST00000075644	ENSMUSP00000075070	TRANSLATION	protein_coding	-	CCDS39417.1	1	533	0	6.45	1.5	359.2	9	1,-3	-	-	10.794	MINOR
ENSMUSG00000023964	Calcr	ENSMUST00000115622	ENSMUSP00000111285	TRANSLATION	protein_coding	-	CCDS39416.1	1	496	0	6.95	1.5	362.6	9	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000023964	Calcr	ENSMUST00000168592	ENSMUSP00000130243	TRANSLATION	protein_coding	-	CCDS39416.1	5	496	0	6.95	1.5	362.6	9	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000048216	Gpr85	ENSMUST00000115492	ENSMUSP00000111155	TRANSLATION	protein_coding	-	CCDS19916.1	1	370	0	0.3	21.5	109.2	6	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000048216	Gpr85	ENSMUST00000115491	ENSMUSP00000111154	TRANSLATION	protein_coding	-	CCDS19916.1	-	370	0	0.3	21.5	109.2	6	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000048216	Gpr85	ENSMUST00000060442	ENSMUSP00000053837	TRANSLATION	protein_coding	-	CCDS19916.1	1	370	0	0.3	21.5	109.2	6	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000048216	Gpr85	ENSMUST00000127072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032667	Pon2	ENSMUST00000057792	ENSMUSP00000062670	TRANSLATION	protein_coding	-	CCDS19900.1	1	354	10	7.75	9.5	136.6	0	0,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032667	Pon2	ENSMUST00000203882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032667	Pon2	ENSMUST00000123838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032667	Pon2	ENSMUST00000135342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055172	C1ra	ENSMUST00000068593	ENSMUSP00000063707	TRANSLATION	protein_coding	-	CCDS20521.1	1	707	26	8.6	0.5	444.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000055430	Nap1l5	ENSMUST00000205101	ENSMUSP00000145365	TRANSLATION	protein_coding	start	-	2	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055430	Nap1l5	ENSMUST00000059539	ENSMUSP00000062780	TRANSLATION	protein_coding	-	CCDS20197.1	-	156	0	0	0.5	42.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000098814	Igkv19-93	ENSMUST00000183936	ENSMUSP00000139272	TRANSLATION	IG_V_gene	stop	-	-	114	0	1.5	0	61.7	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000098814	Igkv19-93	ENSMUST00000196863	ENSMUSP00000143363	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.5	0	61.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076475	Trbv19	ENSMUST00000103276	ENSMUSP00000100092	TRANSLATION	TR_V_gene	stop	-	-	117	0	1	0	49.2	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000047976	Kcna1	ENSMUST00000205171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047976	Kcna1	ENSMUST00000055168	ENSMUSP00000055225	TRANSLATION	protein_coding	-	CCDS20555.1	1	495	0	1	14.8	271.2	3	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047976	Kcna1	ENSMUST00000203094	ENSMUSP00000144947	TRANSLATION	protein_coding	-	CCDS20555.1	-	495	0	1	14.8	271.2	3	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061208	Vmn1r8	ENSMUST00000227706	ENSMUSP00000154544	TRANSLATION	protein_coding	-	CCDS20174.1	-	303	0	0	1.5	193.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061208	Vmn1r8	ENSMUST00000078186	ENSMUSP00000093561	TRANSLATION	protein_coding	-	CCDS20174.1	-	303	0	0	1.5	193.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061208	Vmn1r8	ENSMUST00000228690	ENSMUSP00000154298	TRANSLATION	protein_coding	-	CCDS20174.1	-	303	0	0	1.5	193.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067292	Gm10203	ENSMUST00000087348	ENSMUSP00000084606	TRANSLATION	protein_coding	start/stop	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000052850	Tas2r137	ENSMUST00000064932	ENSMUSP00000063743	TRANSLATION	protein_coding	-	CCDS20031.1	-	333	0	0	0.5	298	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037172	Dennd11	ENSMUST00000201712	ENSMUSP00000143916	TRANSLATION	protein_coding	start/stop	-	3	137	0	0	0	104.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037172	Dennd11	ENSMUST00000039008	ENSMUSP00000045103	TRANSLATION	protein_coding	-	-	1	391	0	0	0.5	254	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037172	Dennd11	ENSMUST00000101492	ENSMUSP00000099031	TRANSLATION	protein_coding	-	-	1	455	0	0	4.6	254	0	-4,-5	-	-	7	PRINCIPAL:5
ENSMUSG00000037172	Dennd11	ENSMUST00000200994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000006431	ENSMUSP00000006431	TRANSLATION	protein_coding	-	CCDS20283.1	1	513	0	12.45	3.9	267.4	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000206052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000205867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000206652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000206911	ENSMUSP00000146154	TRANSLATION	protein_coding	-	-	1	68	0	0.766	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000006269	Atp6v1b1	ENSMUST00000205763	ENSMUSP00000145710	TRANSLATION	protein_coding	start/stop	-	5	215	0	4.98	0	62.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004268	Emg1	ENSMUST00000142187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004268	Emg1	ENSMUST00000203238	ENSMUSP00000144730	TRANSLATION	protein_coding	stop	-	3	122	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004268	Emg1	ENSMUST00000004379	ENSMUSP00000004379	TRANSLATION	protein_coding	-	CCDS20524.1	1	244	14	5.5	7.5	0	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000004268	Emg1	ENSMUST00000141251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004268	Emg1	ENSMUST00000204334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004268	Emg1	ENSMUST00000125795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019577	Pdk4	ENSMUST00000203347	ENSMUSP00000145377	TRANSLATION	protein_coding	stop	-	3	109	0	2.25	0	98.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019577	Pdk4	ENSMUST00000019721	ENSMUSP00000019721	TRANSLATION	protein_coding	-	CCDS19902.1	1	412	26	9.75	5.1	229.3	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000019577	Pdk4	ENSMUST00000134068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107789	Gm44965	ENSMUST00000204879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107789	Gm44965	ENSMUST00000204121	ENSMUSP00000145212	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	59	6	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076545	Igkv4-72	ENSMUST00000103346	ENSMUSP00000100147	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	60.5	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000062190	Lancl2	ENSMUST00000153777	ENSMUSP00000121377	TRANSLATION	nonsense_mediated_decay	start	-	1	441	12	8.11	0	352	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062190	Lancl2	ENSMUST00000050077	ENSMUSP00000052146	TRANSLATION	protein_coding	-	CCDS20185.1	1	450	12	8.11	1.5	352	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062190	Lancl2	ENSMUST00000072954	ENSMUSP00000072723	TRANSLATION	protein_coding	-	CCDS20185.1	1	450	12	8.11	1.5	352	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030154	Klrb1f	ENSMUST00000032257	ENSMUSP00000032257	TRANSLATION	protein_coding	-	CCDS20579.1	1	217	3	3.86	1.5	60.9	2	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030154	Klrb1f	ENSMUST00000204508	ENSMUSP00000145033	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030154	Klrb1f	ENSMUST00000203059	ENSMUSP00000145316	TRANSLATION	nonsense_mediated_decay	-	-	1	111	0	0.36	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030154	Klrb1f	ENSMUST00000204784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030154	Klrb1f	ENSMUST00000204320	ENSMUSP00000144813	TRANSLATION	protein_coding	stop	-	3	111	1	1.5	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030154	Klrb1f	ENSMUST00000204413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047515	BC049715	ENSMUST00000204086	ENSMUSP00000145317	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047515	BC049715	ENSMUST00000052702	ENSMUSP00000049512	TRANSLATION	protein_coding	-	CCDS39685.1	1	247	0	0	0.5	313.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047515	BC049715	ENSMUST00000203499	ENSMUSP00000145015	TRANSLATION	protein_coding	-	CCDS39685.1	5	247	0	0	0.5	313.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047515	BC049715	ENSMUST00000163640	ENSMUSP00000133266	TRANSLATION	protein_coding	-	CCDS39685.1	-	247	0	0	0.5	313.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047515	BC049715	ENSMUST00000205058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034063	4930590J08Rik	ENSMUST00000205569	ENSMUSP00000145930	TRANSLATION	protein_coding	start	-	5	60	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034063	4930590J08Rik	ENSMUST00000059318	ENSMUSP00000053778	TRANSLATION	protein_coding	-	CCDS51853.1	5	933	0	0	0.5	217.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034063	4930590J08Rik	ENSMUST00000205686	ENSMUSP00000146101	TRANSLATION	protein_coding	-	CCDS51853.1	1	933	0	0	0.5	217.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034063	4930590J08Rik	ENSMUST00000205974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076461	Trbv1	ENSMUST00000103262	ENSMUSP00000100078	TRANSLATION	TR_V_gene	stop	-	-	116	0	1	0	50.3	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000056305	Usp39	ENSMUST00000070345	ENSMUSP00000064515	TRANSLATION	protein_coding	-	CCDS20238.1	1	564	4	11.5	6.3	182.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056305	Usp39	ENSMUST00000154799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056305	Usp39	ENSMUST00000206262	ENSMUSP00000145792	TRANSLATION	nonsense_mediated_decay	start	-	5	65	2	1.882	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000145870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062995	Ica1	ENSMUST00000135113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062995	Ica1	ENSMUST00000115520	ENSMUSP00000111182	TRANSLATION	protein_coding	-	CCDS19911.1	5	478	1	0	1.5	511.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000062995	Ica1	ENSMUST00000127398	ENSMUSP00000118194	TRANSLATION	protein_coding	start	-	3	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000126430	ENSMUSP00000116861	TRANSLATION	protein_coding	start	-	3	141	0	0	0	110.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000115519	ENSMUSP00000111181	TRANSLATION	protein_coding	-	-	5	465	1	0	0	496.4	0	-4,-5	-	-	5.094	ALTERNATIVE:2
ENSMUSG00000062995	Ica1	ENSMUST00000115518	ENSMUSP00000111180	TRANSLATION	protein_coding	-	-	1	310	1	0	0	307.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000126039	ENSMUSP00000118010	TRANSLATION	protein_coding	stop	-	3	73	1	0	0	62.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000038403	ENSMUSP00000040062	TRANSLATION	protein_coding	-	CCDS19911.1	1	478	1	0	1.5	511.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000062995	Ica1	ENSMUST00000153390	ENSMUSP00000117734	TRANSLATION	protein_coding	stop	-	5	277	1	0	0	307.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000151758	ENSMUSP00000117112	TRANSLATION	protein_coding	stop	-	3	45	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062995	Ica1	ENSMUST00000156695	ENSMUSP00000138459	TRANSLATION	nonsense_mediated_decay	-	-	5	302	1	0	0	335.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030064	Frmd4b	ENSMUST00000113359	ENSMUSP00000108986	TRANSLATION	protein_coding	-	CCDS85101.1	1	989	0	6.724	6.3	382	0	-4,-5	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000030064	Frmd4b	ENSMUST00000124050	ENSMUSP00000145240	TRANSLATION	protein_coding	stop	-	5	91	0	2.72	0	52.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030064	Frmd4b	ENSMUST00000138301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030064	Frmd4b	ENSMUST00000146191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030064	Frmd4b	ENSMUST00000126899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030064	Frmd4b	ENSMUST00000152385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030064	Frmd4b	ENSMUST00000032146	ENSMUSP00000032146	TRANSLATION	protein_coding	-	CCDS85102.1	1	1035	0	6.724	7.5	382	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000030064	Frmd4b	ENSMUST00000113353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030064	Frmd4b	ENSMUST00000155326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030064	Frmd4b	ENSMUST00000203486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030064	Frmd4b	ENSMUST00000142589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030064	Frmd4b	ENSMUST00000143698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030064	Frmd4b	ENSMUST00000113355	ENSMUSP00000108982	TRANSLATION	protein_coding	-	CCDS39577.1	1	981	0	6.724	7.5	382	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000023349	Clec4n	ENSMUST00000117130	ENSMUSP00000113733	TRANSLATION	protein_coding	-	CCDS51896.1	1	179	8	3.7	0.5	78.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000023349	Clec4n	ENSMUST00000205129	ENSMUSP00000145023	TRANSLATION	protein_coding	-	-	5	89	0	0.2	0	0	4	-3,-5	-	-	0	MINOR
ENSMUSG00000023349	Clec4n	ENSMUST00000144840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023349	Clec4n	ENSMUST00000112554	ENSMUSP00000108173	TRANSLATION	protein_coding	-	CCDS51895.1	1	175	8	3.5	0.5	78.1	4	-3,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000023349	Clec4n	ENSMUST00000024118	ENSMUSP00000024118	TRANSLATION	protein_coding	-	CCDS20512.1	1	209	8	3.7	0.5	78.1	4	-3,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000023349	Clec4n	ENSMUST00000151714	ENSMUSP00000120043	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000049553	Polr1a	ENSMUST00000055296	ENSMUSP00000060858	TRANSLATION	protein_coding	-	CCDS20236.1	1	1717	14	21.46	0.5	864.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000049553	Polr1a	ENSMUST00000205942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049553	Polr1a	ENSMUST00000205842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049553	Polr1a	ENSMUST00000205333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049553	Polr1a	ENSMUST00000206513	ENSMUSP00000145553	TRANSLATION	nonsense_mediated_decay	start	-	2	48	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049553	Polr1a	ENSMUST00000206753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049553	Polr1a	ENSMUST00000206556	ENSMUSP00000146166	TRANSLATION	nonsense_mediated_decay	-	-	1	282	11	3.36	0	69.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049553	Polr1a	ENSMUST00000206982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049553	Polr1a	ENSMUST00000206823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049553	Polr1a	ENSMUST00000205517	ENSMUSP00000146050	TRANSLATION	nonsense_mediated_decay	start	-	1	743	0	8.79	0	324.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072875	Gpr27	ENSMUST00000101122	ENSMUSP00000098680	TRANSLATION	protein_coding	-	CCDS20387.1	-	379	0	0.3	1.5	80.9	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001521	Tulp3	ENSMUST00000128708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001521	Tulp3	ENSMUST00000203625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001521	Tulp3	ENSMUST00000138313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001521	Tulp3	ENSMUST00000157005	ENSMUSP00000145361	TRANSLATION	protein_coding	-	-	1	25	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000001521	Tulp3	ENSMUST00000001562	ENSMUSP00000001562	TRANSLATION	protein_coding	-	CCDS39647.1	1	460	5	6	2.7	426.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000001521	Tulp3	ENSMUST00000133134	ENSMUSP00000145180	TRANSLATION	protein_coding	stop	-	2	76	0	0	0	69.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079654	Prrt4	ENSMUST00000159200	ENSMUSP00000123751	TRANSLATION	protein_coding	-	CCDS51734.1	1	902	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000051046	Olfr214	ENSMUST00000060204	ENSMUSP00000052730	TRANSLATION	protein_coding	-	CCDS20457.1	-	320	0	0.32	1.5	159.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051046	Olfr214	ENSMUST00000214699	ENSMUSP00000150787	TRANSLATION	protein_coding	-	CCDS20457.1	5	320	0	0.32	1.5	159.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051046	Olfr214	ENSMUST00000203867	ENSMUSP00000145465	TRANSLATION	protein_coding	-	CCDS20457.1	3	320	0	0.32	1.5	159.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051046	Olfr214	ENSMUST00000215846	ENSMUSP00000149188	TRANSLATION	protein_coding	-	CCDS20457.1	5	320	0	0.32	1.5	159.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051046	Olfr214	ENSMUST00000217313	ENSMUSP00000150737	TRANSLATION	protein_coding	-	CCDS20457.1	5	320	0	0.32	1.5	159.2	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000076489	Trbj1-7	ENSMUST00000103290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076489	Trbj1-7	ENSMUST00000193061	ENSMUSP00000141199	TRANSLATION	TR_J_gene	start/stop	-	-	15	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000102802	Mgam2-ps	ENSMUST00000216691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102802	Mgam2-ps	ENSMUST00000195870	ENSMUSP00000158841	TRANSLATION	protein_coding	-	-	-	2379	0	38.61	0	1201.6	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000102802	Mgam2-ps	ENSMUST00000215813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030047	Arhgap25	ENSMUST00000113637	ENSMUSP00000109267	TRANSLATION	protein_coding	-	CCDS20321.1	1	648	10	5.71	3.9	217.1	0	-4,-2	-	-	19	PRINCIPAL:4
ENSMUSG00000030047	Arhgap25	ENSMUST00000203559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030047	Arhgap25	ENSMUST00000145128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030047	Arhgap25	ENSMUST00000101197	ENSMUSP00000098758	TRANSLATION	protein_coding	-	CCDS20322.1	1	622	10	5.71	2.7	217.1	0	-4,-6	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000030047	Arhgap25	ENSMUST00000071024	ENSMUSP00000068964	TRANSLATION	protein_coding	-	CCDS71790.1	1	559	1	4.71	1.7	144.5	0	-4,-5	-	-	5.887	MINOR
ENSMUSG00000052736	Klrc2	ENSMUST00000118401	ENSMUSP00000113970	TRANSLATION	protein_coding	-	CCDS51924.1	1	213	4	2.24	0.5	45.6	2	-4,-5	-	-	15.514	ALTERNATIVE:2
ENSMUSG00000052736	Klrc2	ENSMUST00000119533	ENSMUSP00000112733	TRANSLATION	protein_coding	-	CCDS51925.1	1	238	4	2.24	0.5	45.6	2	-4,-5	-	-	15.514	PRINCIPAL:4
ENSMUSG00000052736	Klrc2	ENSMUST00000112057	ENSMUSP00000107688	TRANSLATION	protein_coding	-	CCDS51925.1	1	238	4	2.24	0.5	45.6	2	-4,-5	-	-	15.514	PRINCIPAL:4
ENSMUSG00000052736	Klrc2	ENSMUST00000145984	ENSMUSP00000116286	TRANSLATION	protein_coding	-	-	1	206	3	1.904	0	29.9	2	-4,-5	-	-	11.622	MINOR
ENSMUSG00000052736	Klrc2	ENSMUST00000149494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052736	Klrc2	ENSMUST00000071920	ENSMUSP00000071813	TRANSLATION	protein_coding	-	-	5	221	4	2.438	0.5	45.6	2	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000039841	Zfp800	ENSMUST00000115320	ENSMUSP00000110975	TRANSLATION	protein_coding	-	CCDS39445.1	1	662	28	0	6.3	204.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039841	Zfp800	ENSMUST00000035930	ENSMUSP00000039222	TRANSLATION	protein_coding	-	CCDS39445.1	1	662	28	0	6.3	204.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039841	Zfp800	ENSMUST00000115321	ENSMUSP00000110976	TRANSLATION	protein_coding	-	CCDS39445.1	1	662	28	0	6.3	204.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039841	Zfp800	ENSMUST00000123098	ENSMUSP00000114604	TRANSLATION	protein_coding	stop	-	5	469	16	0	0	130.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039841	Zfp800	ENSMUST00000155494	ENSMUSP00000120392	TRANSLATION	protein_coding	stop	-	2	160	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053977	Cd8a	ENSMUST00000205054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053977	Cd8a	ENSMUST00000172321	ENSMUSP00000131873	TRANSLATION	protein_coding	-	CCDS51806.1	1	222	0	2.2	0.5	56.9	1	-1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000053977	Cd8a	ENSMUST00000066747	ENSMUSP00000068123	TRANSLATION	protein_coding	-	CCDS39507.1	1	247	0	2.2	0.5	56.9	1	-1,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000039904	Gpr37	ENSMUST00000200812	ENSMUSP00000144683	TRANSLATION	protein_coding	-	-	1	440	0	0.58	0	88.4	5	3,-3	-	-	8.7	MINOR
ENSMUSG00000039904	Gpr37	ENSMUST00000054867	ENSMUSP00000052185	TRANSLATION	protein_coding	-	CCDS19949.1	1	600	0	0.86	1.5	110.8	8	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000079853	Klra1	ENSMUST00000127570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079853	Klra1	ENSMUST00000032288	ENSMUSP00000032288	TRANSLATION	protein_coding	-	CCDS20602.1	1	262	3	3.9	0.5	226.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000004655	Aqp1	ENSMUST00000004774	ENSMUSP00000004774	TRANSLATION	protein_coding	-	CCDS20164.1	1	269	0	3.75	11.5	278.4	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000046947	Adck2	ENSMUST00000051249	ENSMUSP00000050256	TRANSLATION	protein_coding	-	-	5	568	2	0	1	0	0	-4,0	-	-	2	MINOR
ENSMUSG00000046947	Adck2	ENSMUST00000134913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046947	Adck2	ENSMUST00000145788	ENSMUSP00000144149	TRANSLATION	protein_coding	stop	-	3	197	2	0	0	33.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046947	Adck2	ENSMUST00000140364	ENSMUSP00000123563	TRANSLATION	protein_coding	-	CCDS20024.1	1	617	2	0	1.5	53.1	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000046947	Adck2	ENSMUST00000149304	ENSMUSP00000121590	TRANSLATION	nonsense_mediated_decay	start	-	5	118	0	0	0	35.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046947	Adck2	ENSMUST00000127427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094930	Igkv6-25	ENSMUST00000103383	ENSMUSP00000100184	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.5	0	54.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000045613	Chrm2	ENSMUST00000169004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045613	Chrm2	ENSMUST00000172278	ENSMUSP00000130874	TRANSLATION	protein_coding	-	CCDS20004.1	1	466	0	1	1.8	248.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001642	Akr1b3	ENSMUST00000126991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001642	Akr1b3	ENSMUST00000201392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001642	Akr1b3	ENSMUST00000154655	ENSMUSP00000114391	TRANSLATION	protein_coding	stop	-	5	176	9	3.455	0	82.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001642	Akr1b3	ENSMUST00000142761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001642	Akr1b3	ENSMUST00000102980	ENSMUSP00000100045	TRANSLATION	protein_coding	-	CCDS19990.1	1	316	31	8.58	9.5	183.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001642	Akr1b3	ENSMUST00000136559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033735	Spr	ENSMUST00000174769	ENSMUSP00000134379	TRANSLATION	protein_coding	-	-	1	126	15	1.105	0	36.5	0	-3,-1	-	-	2.376	MINOR
ENSMUSG00000033735	Spr	ENSMUST00000204757	ENSMUSP00000145412	TRANSLATION	nonsense_mediated_decay	-	-	5	262	28	4.75	3.9	92.2	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000033735	Spr	ENSMUST00000045986	ENSMUSP00000048111	TRANSLATION	protein_coding	-	CCDS51826.1	1	262	28	4.75	3.9	92.2	0	-3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000033735	Spr	ENSMUST00000174286	ENSMUSP00000133859	TRANSLATION	protein_coding	-	-	2	219	23	3.75	0	33.6	0	-3,-1	-	-	8.85	MINOR
ENSMUSG00000076478	Trbv23	ENSMUST00000193997	ENSMUSP00000141642	TRANSLATION	TR_V_gene	stop	-	-	115	0	1.1	0	55.8	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076478	Trbv23	ENSMUST00000103279	ENSMUSP00000100095	TRANSLATION	TR_V_gene	stop	-	-	114	0	1.1	0	55.8	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000115170	Vmn1r38	ENSMUST00000227493	ENSMUSP00000154068	TRANSLATION	protein_coding	-	CCDS20216.1	-	302	0	0	1.5	175.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115170	Vmn1r38	ENSMUST00000227694	ENSMUSP00000154495	TRANSLATION	protein_coding	-	CCDS20216.1	-	302	0	0	1.5	175.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115170	Vmn1r38	ENSMUST00000226457	ENSMUSP00000153903	TRANSLATION	protein_coding	-	CCDS20216.1	-	302	0	0	1.5	175.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029517	Ankrd7	ENSMUST00000115396	ENSMUSP00000111054	TRANSLATION	protein_coding	-	CCDS51724.1	1	280	0	4	1.5	99.8	0	-4,-7	-	-	9.888	MINOR
ENSMUSG00000029517	Ankrd7	ENSMUST00000031489	ENSMUSP00000031489	TRANSLATION	protein_coding	-	CCDS19933.1	1	279	0	4	1.5	135	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029766	1700012A03Rik	ENSMUST00000201926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029766	1700012A03Rik	ENSMUST00000031778	ENSMUSP00000031778	TRANSLATION	protein_coding	-	CCDS19984.1	1	130	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000029766	1700012A03Rik	ENSMUST00000135066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029766	1700012A03Rik	ENSMUST00000156267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035245	Eogt	ENSMUST00000204331	ENSMUSP00000145303	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000035245	Eogt	ENSMUST00000054344	ENSMUSP00000061610	TRANSLATION	protein_coding	-	CCDS20383.1	1	527	0	0	2.7	0	0	-1,-3	-	-	0	PRINCIPAL:2
ENSMUSG00000035245	Eogt	ENSMUST00000113387	ENSMUSP00000109014	TRANSLATION	protein_coding	-	-	5	61	0	0	0	0	0	-2,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000035245	Eogt	ENSMUST00000142116	ENSMUSP00000116362	TRANSLATION	protein_coding	stop	-	2	49	0	0	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000035245	Eogt	ENSMUST00000130562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035245	Eogt	ENSMUST00000142553	ENSMUSP00000115101	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000035245	Eogt	ENSMUST00000135187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035245	Eogt	ENSMUST00000136575	ENSMUSP00000117541	TRANSLATION	protein_coding	stop	-	5	148	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000203954	ENSMUSP00000145028	TRANSLATION	nonsense_mediated_decay	-	-	5	353	0	5.366	7.5	169.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000114459	ENSMUSP00000110103	TRANSLATION	protein_coding	-	-	5	353	0	5.366	7.5	169.9	0	-4,-5	-	-	14.868	ALTERNATIVE:1
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000090002	ENSMUSP00000087453	TRANSLATION	protein_coding	-	CCDS51774.1	5	341	0	4.866	7.8	169.9	0	-4,-5	-	-	13.998	PRINCIPAL:2
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000204885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000204158	ENSMUSP00000145383	TRANSLATION	nonsense_mediated_decay	-	-	1	301	0	4.8	4.1	169.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000205204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000203253	ENSMUSP00000144736	TRANSLATION	protein_coding	start/stop	-	3	155	0	2.866	0	117.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000204188	ENSMUSP00000145245	TRANSLATION	protein_coding	-	CCDS51773.1	5	301	0	4.8	4.1	169.9	0	-4,-5	-	-	12.234	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000204090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000203655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000069949	ENSMUSP00000067491	TRANSLATION	protein_coding	-	CCDS51773.1	1	301	0	4.8	4.1	169.9	0	-4,-5	-	-	12.234	MINOR
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000204902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004980	Hnrnpa2b1	ENSMUST00000203220	ENSMUSP00000145374	TRANSLATION	protein_coding	-	CCDS51774.1	1	341	0	4.866	7.8	169.9	0	-4,-5	-	-	13.998	PRINCIPAL:2
ENSMUSG00000090019	Gimap1	ENSMUST00000054368	ENSMUSP00000062108	TRANSLATION	protein_coding	-	CCDS20113.1	1	300	20	2	0.5	263.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090019	Gimap1	ENSMUST00000203797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090019	Gimap1	ENSMUST00000142703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090019	Gimap1	ENSMUST00000204168	ENSMUSP00000145479	TRANSLATION	protein_coding	-	CCDS20113.1	1	300	20	2	0.5	263.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090019	Gimap1	ENSMUST00000140054	ENSMUSP00000118345	TRANSLATION	protein_coding	stop	-	3	160	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090019	Gimap1	ENSMUST00000205031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057981	Vmn1r12	ENSMUST00000227581	ENSMUSP00000154078	TRANSLATION	protein_coding	-	-	-	263	0	0	0	173	5	-4,-5	-	-	5.424	MINOR
ENSMUSG00000057981	Vmn1r12	ENSMUST00000226866	ENSMUSP00000154607	TRANSLATION	protein_coding	-	CCDS51794.1	-	307	0	0	0.5	182.6	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057981	Vmn1r12	ENSMUST00000073384	ENSMUSP00000073098	TRANSLATION	protein_coding	-	CCDS51794.1	-	307	0	0	0.5	182.6	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062952	Tas2r110	ENSMUST00000082014	ENSMUSP00000080674	TRANSLATION	protein_coding	-	CCDS20626.1	-	333	0	0	1.5	269.6	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030046	Bmp10	ENSMUST00000032125	ENSMUSP00000032125	TRANSLATION	protein_coding	-	CCDS51838.1	1	421	0	1.4	3.9	182.5	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000033726	Emx1	ENSMUST00000173919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033726	Emx1	ENSMUST00000045942	ENSMUSP00000046026	TRANSLATION	protein_coding	-	CCDS20290.1	1	257	0	1.4	0.5	76.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096580	Igkv1-132	ENSMUST00000103305	ENSMUSP00000100106	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	59.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000058831	Opn1sw	ENSMUST00000080428	ENSMUSP00000079289	TRANSLATION	protein_coding	-	CCDS19959.1	1	346	14	6.09	9.2	144.6	6	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000058831	Opn1sw	ENSMUST00000131928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058831	Opn1sw	ENSMUST00000173653	ENSMUSP00000133534	TRANSLATION	protein_coding	stop	-	3	61	5	1.75	0	28.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000058831	Opn1sw	ENSMUST00000147483	ENSMUSP00000133745	TRANSLATION	protein_coding	-	-	1	283	9	5.09	0	119.2	4	-4,-6	-	-	11.142	MINOR
ENSMUSG00000076549	Igkv4-68	ENSMUST00000103350	ENSMUSP00000100151	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	60.4	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000036667	Tcaf1	ENSMUST00000045140	ENSMUSP00000036379	TRANSLATION	protein_coding	-	CCDS20076.1	1	922	0	1.84	1.5	256.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036667	Tcaf1	ENSMUST00000152100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036667	Tcaf1	ENSMUST00000121083	ENSMUSP00000114036	TRANSLATION	protein_coding	-	CCDS20076.1	1	922	0	1.84	1.5	256.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036667	Tcaf1	ENSMUST00000153952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036667	Tcaf1	ENSMUST00000045054	ENSMUSP00000046137	TRANSLATION	protein_coding	-	CCDS20076.1	1	922	0	1.84	1.5	256.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036667	Tcaf1	ENSMUST00000141794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036667	Tcaf1	ENSMUST00000151021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036667	Tcaf1	ENSMUST00000165486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039159	Ube2h	ENSMUST00000102993	ENSMUSP00000100058	TRANSLATION	protein_coding	-	CCDS19969.1	1	183	0	5	16.2	128.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000039159	Ube2h	ENSMUST00000148744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039159	Ube2h	ENSMUST00000094543	ENSMUSP00000092121	TRANSLATION	protein_coding	-	CCDS51743.1	1	152	0	4	5.3	41.6	0	-4,-6	-	-	5.926	MINOR
ENSMUSG00000039159	Ube2h	ENSMUST00000128141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030259	Rassf8	ENSMUST00000032388	ENSMUSP00000032388	TRANSLATION	protein_coding	-	CCDS20696.1	1	419	0	2	10.8	32.7	0	-4,-6	-	-	14.262	PRINCIPAL:1
ENSMUSG00000030259	Rassf8	ENSMUST00000058538	ENSMUSP00000130671	TRANSLATION	protein_coding	start	-	-	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030259	Rassf8	ENSMUST00000140966	ENSMUSP00000122684	TRANSLATION	protein_coding	stop	-	2	79	0	2	0	37.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030259	Rassf8	ENSMUST00000111704	ENSMUSP00000107333	TRANSLATION	protein_coding	-	CCDS20696.1	5	419	0	2	10.8	32.7	0	-4,-6	-	-	14.262	PRINCIPAL:1
ENSMUSG00000073043	Atoh1	ENSMUST00000101351	ENSMUSP00000098903	TRANSLATION	protein_coding	-	CCDS20203.1	-	351	0	0	2.7	61.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068551	Zfp467	ENSMUST00000101443	ENSMUSP00000098986	TRANSLATION	protein_coding	-	CCDS51763.1	1	113	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114564	ENSMUSP00000110211	TRANSLATION	protein_coding	-	-	2	94	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114566	ENSMUSP00000110213	TRANSLATION	protein_coding	-	CCDS51763.1	3	113	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000140198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068551	Zfp467	ENSMUST00000141449	ENSMUSP00000138291	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114561	ENSMUSP00000110208	TRANSLATION	protein_coding	-	CCDS51764.1	1	594	48	0.6	3.9	219.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000068551	Zfp467	ENSMUST00000114558	ENSMUSP00000110205	TRANSLATION	protein_coding	-	CCDS51765.1	1	111	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114563	ENSMUSP00000110210	TRANSLATION	protein_coding	-	-	5	111	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114560	ENSMUSP00000110207	TRANSLATION	protein_coding	-	CCDS51764.1	1	594	48	0.6	3.9	219.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000068551	Zfp467	ENSMUST00000114556	ENSMUSP00000110203	TRANSLATION	protein_coding	-	-	1	92	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068551	Zfp467	ENSMUST00000114559	ENSMUSP00000110206	TRANSLATION	protein_coding	-	CCDS51765.1	1	111	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029765	Plxna4	ENSMUST00000200732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029765	Plxna4	ENSMUST00000115096	ENSMUSP00000110748	TRANSLATION	protein_coding	-	CCDS19985.2	1	1893	0	30.55	7.5	1299.3	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000042389	Tsen2	ENSMUST00000143520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042389	Tsen2	ENSMUST00000130425	ENSMUSP00000145431	TRANSLATION	protein_coding	-	-	3	103	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042389	Tsen2	ENSMUST00000138200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042389	Tsen2	ENSMUST00000123359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042389	Tsen2	ENSMUST00000040234	ENSMUSP00000038211	TRANSLATION	protein_coding	-	CCDS20440.1	1	460	3	2.34	0.5	111.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000046192	Iqub	ENSMUST00000052277	ENSMUSP00000051177	TRANSLATION	protein_coding	-	CCDS19941.1	1	788	4	2	1.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000029672	Fam3c	ENSMUST00000165576	ENSMUSP00000127709	TRANSLATION	protein_coding	-	CCDS39436.1	1	227	0	3.72	15	100.8	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000029672	Fam3c	ENSMUST00000163963	ENSMUSP00000127559	TRANSLATION	protein_coding	-	-	1	247	0	3.72	0	100.8	0	-4,-7	-	-	12	MINOR
ENSMUSG00000029672	Fam3c	ENSMUST00000164669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029672	Fam3c	ENSMUST00000163371	ENSMUSP00000128855	TRANSLATION	nonsense_mediated_decay	-	-	5	99	0	0.8	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029672	Fam3c	ENSMUST00000081288	ENSMUSP00000080040	TRANSLATION	protein_coding	-	-	1	197	0	3.72	0	100.8	0	-4,-7	-	-	12	MINOR
ENSMUSG00000029672	Fam3c	ENSMUST00000168965	ENSMUSP00000128135	TRANSLATION	protein_coding	stop	-	5	110	0	1.3	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000055239	Kcmf1	ENSMUST00000204708	ENSMUSP00000144907	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000055239	Kcmf1	ENSMUST00000203431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055239	Kcmf1	ENSMUST00000203004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055239	Kcmf1	ENSMUST00000206378	ENSMUSP00000145559	TRANSLATION	protein_coding	-	-	5	110	12	1.664	0	88.3	0	-4,-5	-	-	11.628	MINOR
ENSMUSG00000055239	Kcmf1	ENSMUST00000068697	ENSMUSP00000064410	TRANSLATION	protein_coding	-	CCDS39518.1	1	381	16	2.264	13.8	123.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000055239	Kcmf1	ENSMUST00000204598	ENSMUSP00000144910	TRANSLATION	protein_coding	-	CCDS85066.1	1	330	8	1.2	3.7	78	0	-4,-5	-	-	7.954	MINOR
ENSMUSG00000005225	Plekha8	ENSMUST00000101385	ENSMUSP00000098935	TRANSLATION	protein_coding	-	CCDS39491.1	1	474	5	4.455	4.1	146	0	-4,-5	-	-	12.791	MINOR
ENSMUSG00000005225	Plekha8	ENSMUST00000119706	ENSMUSP00000112466	TRANSLATION	protein_coding	-	CCDS51781.1	2	519	5	5.955	7.5	190	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000029788	Cpa5	ENSMUST00000165949	ENSMUSP00000126436	TRANSLATION	nonsense_mediated_decay	-	-	1	309	5	6.95	0	226.6	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000029788	Cpa5	ENSMUST00000115139	ENSMUSP00000110792	TRANSLATION	protein_coding	-	CCDS19976.1	1	436	9	11.11	2.7	376.3	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000029788	Cpa5	ENSMUST00000062758	ENSMUSP00000057722	TRANSLATION	protein_coding	-	CCDS19976.1	1	436	9	11.11	2.7	376.3	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000029788	Cpa5	ENSMUST00000115138	ENSMUSP00000110791	TRANSLATION	protein_coding	-	-	5	399	6	9.1	0	311.4	0	-1,-4	-	-	8.088	MINOR
ENSMUSG00000009376	Met	ENSMUST00000140070	ENSMUSP00000117856	TRANSLATION	protein_coding	stop	-	3	169	0	1	0	55	0	4,-1	-	-	-1	MINOR
ENSMUSG00000009376	Met	ENSMUST00000152802	ENSMUSP00000118755	TRANSLATION	protein_coding	start	-	5	214	0	2.65	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009376	Met	ENSMUST00000115442	ENSMUSP00000111102	TRANSLATION	protein_coding	-	CCDS19925.1	5	1379	16	18.65	3.9	652.5	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000009376	Met	ENSMUST00000145473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009376	Met	ENSMUST00000115443	ENSMUSP00000111103	TRANSLATION	protein_coding	-	CCDS19925.1	5	1379	16	18.65	3.9	652.5	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000009376	Met	ENSMUST00000080469	ENSMUSP00000079324	TRANSLATION	protein_coding	-	CCDS19925.1	1	1379	16	18.65	3.9	652.5	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000009376	Met	ENSMUST00000148903	ENSMUSP00000121923	TRANSLATION	protein_coding	start/stop	-	3	157	0	1.24	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000029787	Avl9	ENSMUST00000205188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029787	Avl9	ENSMUST00000204193	ENSMUSP00000145053	TRANSLATION	nonsense_mediated_decay	-	-	3	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029787	Avl9	ENSMUST00000031805	ENSMUSP00000031805	TRANSLATION	protein_coding	-	CCDS51789.1	1	649	0	0	3.9	522.9	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000029787	Avl9	ENSMUST00000177249	ENSMUSP00000144696	TRANSLATION	protein_coding	-	-	1	222	0	0	0	289.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029787	Avl9	ENSMUST00000176560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002222	Rmnd5a	ENSMUST00000123947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002222	Rmnd5a	ENSMUST00000140696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002222	Rmnd5a	ENSMUST00000149415	ENSMUSP00000115130	TRANSLATION	protein_coding	start	-	1	218	4	0	0	116.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002222	Rmnd5a	ENSMUST00000002292	ENSMUSP00000002292	TRANSLATION	protein_coding	-	CCDS20231.1	1	391	4	0	15.7	133.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000002222	Rmnd5a	ENSMUST00000144081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089997	1810020O05Rik	ENSMUST00000162547	ENSMUSP00000158660	TRANSLATION	nonsense_mediated_decay	start	-	1	400	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089997	1810020O05Rik	ENSMUST00000238521	ENSMUSP00000158817	TRANSLATION	protein_coding	-	-	-	1158	0	0	0	134.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042505	Sdhaf3	ENSMUST00000040826	ENSMUSP00000040935	TRANSLATION	protein_coding	-	CCDS39423.1	1	125	0	0	6.5	64.4	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000042505	Sdhaf3	ENSMUST00000123848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073096	Lrrc61	ENSMUST00000204071	ENSMUSP00000145164	TRANSLATION	protein_coding	stop	-	2	34	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073096	Lrrc61	ENSMUST00000114545	ENSMUSP00000110192	TRANSLATION	protein_coding	-	CCDS39478.1	1	259	0	1.48	5.1	28.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073096	Lrrc61	ENSMUST00000203627	ENSMUSP00000145141	TRANSLATION	protein_coding	stop	-	2	95	0	1.28	0	28.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073096	Lrrc61	ENSMUST00000146245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073096	Lrrc61	ENSMUST00000153222	ENSMUSP00000118573	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073096	Lrrc61	ENSMUST00000101436	ENSMUSP00000098979	TRANSLATION	protein_coding	-	CCDS39478.1	1	259	0	1.48	5.1	28.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000054431	Olfr450	ENSMUST00000218832	ENSMUSP00000151908	TRANSLATION	protein_coding	-	CCDS20080.1	5	310	0	0.42	3.9	164.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000054431	Olfr450	ENSMUST00000067503	ENSMUSP00000068823	TRANSLATION	protein_coding	-	CCDS20080.1	-	310	0	0.42	3.9	164.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000079264	Gm11077	ENSMUST00000111844	ENSMUSP00000107475	TRANSLATION	protein_coding	start/stop	-	5	28	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000054446	Cpa1	ENSMUST00000031806	ENSMUSP00000031806	TRANSLATION	protein_coding	-	CCDS19977.1	1	419	9	9.1	3.9	393.5	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000054446	Cpa1	ENSMUST00000139004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076525	Igkv1-99	ENSMUST00000103326	ENSMUSP00000100127	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.5	0	56.9	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076525	Igkv1-99	ENSMUST00000168090	ENSMUSP00000132003	TRANSLATION	IG_V_gene	stop	-	-	120	3	1.5	0	56.9	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000089862	Umad1	ENSMUST00000159335	ENSMUSP00000123738	TRANSLATION	protein_coding	-	-	1	156	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000089862	Umad1	ENSMUST00000162034	ENSMUSP00000124306	TRANSLATION	protein_coding	-	-	3	58	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000089862	Umad1	ENSMUST00000159433	ENSMUSP00000124564	TRANSLATION	protein_coding	-	CCDS80488.1	1	133	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000089862	Umad1	ENSMUST00000159378	ENSMUSP00000125672	TRANSLATION	protein_coding	stop	-	3	104	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089862	Umad1	ENSMUST00000160705	ENSMUSP00000124993	TRANSLATION	protein_coding	-	CCDS80487.1	2	159	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000089862	Umad1	ENSMUST00000160253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089862	Umad1	ENSMUST00000161400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089862	Umad1	ENSMUST00000159168	ENSMUSP00000125134	TRANSLATION	protein_coding	-	CCDS80488.1	1	133	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000005893	Nr2c2	ENSMUST00000204497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005893	Nr2c2	ENSMUST00000204661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005893	Nr2c2	ENSMUST00000113460	ENSMUSP00000109087	TRANSLATION	protein_coding	-	CCDS20372.1	1	596	8	8.72	8.8	266.3	0	-4,-7	-	-	20.166	PRINCIPAL:3
ENSMUSG00000005893	Nr2c2	ENSMUST00000146175	ENSMUSP00000138465	TRANSLATION	nonsense_mediated_decay	-	-	1	501	8	6.206	0	189	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005893	Nr2c2	ENSMUST00000133133	ENSMUSP00000145094	TRANSLATION	protein_coding	stop	-	2	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005893	Nr2c2	ENSMUST00000133321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005893	Nr2c2	ENSMUST00000113463	ENSMUSP00000109090	TRANSLATION	protein_coding	-	CCDS85096.1	1	629	8	8.72	11.8	266.3	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000005893	Nr2c2	ENSMUST00000204349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038456	Dennd2a	ENSMUST00000036877	ENSMUSP00000045367	TRANSLATION	protein_coding	-	CCDS20023.1	1	1000	0	3.66	1.5	289.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038456	Dennd2a	ENSMUST00000145541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038456	Dennd2a	ENSMUST00000154149	ENSMUSP00000116907	TRANSLATION	protein_coding	stop	-	1	420	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038456	Dennd2a	ENSMUST00000202707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038456	Dennd2a	ENSMUST00000149162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079426	Arpc4	ENSMUST00000171058	ENSMUSP00000131690	TRANSLATION	protein_coding	-	CCDS51871.1	5	91	0	2.25	1.7	149	0	-4,-5	-	-	2.134	MINOR
ENSMUSG00000079426	Arpc4	ENSMUST00000203578	ENSMUSP00000145344	TRANSLATION	protein_coding	-	CCDS85117.1	1	78	0	1.75	2.9	129.8	0	-4,-2	-	-	1.374	MINOR
ENSMUSG00000079426	Arpc4	ENSMUST00000204802	ENSMUSP00000144751	TRANSLATION	protein_coding	-	CCDS85117.1	3	78	0	1.75	2.9	129.8	0	-4,-2	-	-	1.374	MINOR
ENSMUSG00000079426	Arpc4	ENSMUST00000156898	ENSMUSP00000114839	TRANSLATION	protein_coding	-	CCDS20417.1	1	168	0	4.25	21.5	280.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000076586	Igkv8-21	ENSMUST00000103387	ENSMUSP00000100188	TRANSLATION	IG_V_gene	stop	-	-	120	2	1.5	0	65.1	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000030213	Atf7ip	ENSMUST00000186742	ENSMUSP00000139908	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000189535	ENSMUSP00000139446	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000187429	ENSMUSP00000140502	TRANSLATION	protein_coding	stop	-	5	969	0	0	0	199.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000186577	ENSMUSP00000140121	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	188.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000032335	ENSMUSP00000032335	TRANSLATION	protein_coding	-	CCDS20651.1	1	1306	0	1.5	0.5	333.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030213	Atf7ip	ENSMUST00000185936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030213	Atf7ip	ENSMUST00000195743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030213	Atf7ip	ENSMUST00000188805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030213	Atf7ip	ENSMUST00000203178	ENSMUSP00000145190	TRANSLATION	protein_coding	start/stop	-	3	345	0	0	0	133.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000185332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030213	Atf7ip	ENSMUST00000203988	ENSMUSP00000145022	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	93.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030213	Atf7ip	ENSMUST00000185724	ENSMUSP00000140458	TRANSLATION	protein_coding	stop	-	5	559	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030004	Nat8	ENSMUST00000032073	ENSMUSP00000032073	TRANSLATION	protein_coding	-	CCDS20301.1	1	227	22	0.2	0.5	53.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000061762	Tac1	ENSMUST00000185187	ENSMUSP00000139347	TRANSLATION	protein_coding	-	CCDS19906.1	1	130	0	1.23	7.5	0	0	4,-1	-	-	7.857	PRINCIPAL:1
ENSMUSG00000061762	Tac1	ENSMUST00000090679	ENSMUSP00000088175	TRANSLATION	protein_coding	-	-	5	112	0	0.83	7	0	0	4,-1	-	-	5.763	MINOR
ENSMUSG00000061762	Tac1	ENSMUST00000184481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061762	Tac1	ENSMUST00000184986	ENSMUSP00000138818	TRANSLATION	protein_coding	-	CCDS80486.1	1	115	0	0.73	11.5	0	0	4,-1	-	-	6.558	MINOR
ENSMUSG00000061762	Tac1	ENSMUST00000185130	ENSMUSP00000139032	TRANSLATION	protein_coding	stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029784	Ssmem1	ENSMUST00000031797	ENSMUSP00000031797	TRANSLATION	protein_coding	-	CCDS57417.1	1	196	0	0	1.5	320.7	0	-4,-5	-	-	0.244	MINOR
ENSMUSG00000029784	Ssmem1	ENSMUST00000031798	ENSMUSP00000031798	TRANSLATION	protein_coding	-	CCDS19973.1	1	244	0	0	5.1	468.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000029784	Ssmem1	ENSMUST00000131485	ENSMUSP00000122018	TRANSLATION	protein_coding	stop	-	2	66	0	0	0	99.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033182	Kbtbd12	ENSMUST00000120933	ENSMUSP00000112581	TRANSLATION	protein_coding	-	CCDS51842.2	5	625	0	3.9	6.3	307.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033182	Kbtbd12	ENSMUST00000203223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033182	Kbtbd12	ENSMUST00000038804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033182	Kbtbd12	ENSMUST00000184591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033182	Kbtbd12	ENSMUST00000184664	ENSMUSP00000139069	TRANSLATION	protein_coding	stop	-	3	76	0	0.64	0	47.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033182	Kbtbd12	ENSMUST00000184878	ENSMUSP00000139333	TRANSLATION	protein_coding	-	-	5	202	0	1.52	0	61.2	0	-4,-5	-	-	1.242	MINOR
ENSMUSG00000033182	Kbtbd12	ENSMUST00000184743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030054	Gp9	ENSMUST00000032133	ENSMUSP00000032133	TRANSLATION	protein_coding	-	CCDS20328.1	1	177	0	0.64	0.5	61.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056952	Tatdn2	ENSMUST00000089018	ENSMUSP00000086412	TRANSLATION	protein_coding	-	CCDS20431.1	1	722	8	2.64	0.5	197.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000056952	Tatdn2	ENSMUST00000138420	ENSMUSP00000116559	TRANSLATION	protein_coding	start	-	3	147	5	1.84	0	123.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056952	Tatdn2	ENSMUST00000153661	ENSMUSP00000123557	TRANSLATION	protein_coding	start	-	3	138	3	1.6	0	72.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056952	Tatdn2	ENSMUST00000204753	ENSMUSP00000145308	TRANSLATION	protein_coding	-	CCDS85124.1	1	783	8	2.64	0.5	197.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000056952	Tatdn2	ENSMUST00000113022	ENSMUSP00000108645	TRANSLATION	protein_coding	-	CCDS85124.1	1	783	8	2.64	0.5	197.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000000182	Fgf23	ENSMUST00000000186	ENSMUSP00000000186	TRANSLATION	protein_coding	-	CCDS20562.1	1	251	0	2.8	1.5	75.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000001630	Stk38l	ENSMUST00000203318	ENSMUSP00000145209	TRANSLATION	protein_coding	stop	-	5	30	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001630	Stk38l	ENSMUST00000111644	ENSMUSP00000107271	TRANSLATION	protein_coding	-	-	5	471	18	9.776	0.5	207.1	0	-4,-7	-	-	16.302	MINOR
ENSMUSG00000001630	Stk38l	ENSMUST00000001675	ENSMUSP00000001675	TRANSLATION	protein_coding	-	CCDS39712.1	1	464	18	9.71	15.8	235.4	0	-4,-7	-	-	21.868	PRINCIPAL:1
ENSMUSG00000039742	Fam71f1	ENSMUST00000168771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039742	Fam71f1	ENSMUST00000163229	ENSMUSP00000132402	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039742	Fam71f1	ENSMUST00000090487	ENSMUSP00000087973	TRANSLATION	protein_coding	-	CCDS39451.1	1	341	0	0	7.5	90.8	0	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000039742	Fam71f1	ENSMUST00000164560	ENSMUSP00000126496	TRANSLATION	protein_coding	-	CCDS80497.1	1	344	0	0	7.5	90.8	0	-4,-2	-	-	9	ALTERNATIVE:1
ENSMUSG00000039742	Fam71f1	ENSMUST00000166462	ENSMUSP00000132703	TRANSLATION	protein_coding	-	CCDS80498.1	1	342	0	0	5.1	90.8	0	-4,-2	-	-	7.893	MINOR
ENSMUSG00000053119	Chmp3	ENSMUST00000065364	ENSMUSP00000068410	TRANSLATION	protein_coding	-	CCDS20232.1	1	224	0	6.63	5.3	135.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053119	Chmp3	ENSMUST00000142169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053119	Chmp3	ENSMUST00000204199	ENSMUSP00000144867	TRANSLATION	protein_coding	stop	-	2	96	0	3.33	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053119	Chmp3	ENSMUST00000204535	ENSMUSP00000145223	TRANSLATION	protein_coding	stop	-	3	59	0	1.75	0	43.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000053119	Chmp3	ENSMUST00000127774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053119	Chmp3	ENSMUST00000059462	ENSMUSP00000109815	TRANSLATION	protein_coding	-	CCDS20232.1	1	224	0	6.63	5.3	135.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053119	Chmp3	ENSMUST00000132917	ENSMUSP00000144985	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053119	Chmp3	ENSMUST00000128382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076486	Trbj1-4	ENSMUST00000103287	ENSMUSP00000142193	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030286	Emc3	ENSMUST00000203526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030286	Emc3	ENSMUST00000032425	ENSMUSP00000032425	TRANSLATION	protein_coding	-	CCDS20425.1	1	261	0	0	19.5	178.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030286	Emc3	ENSMUST00000154605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054106	Try4	ENSMUST00000031913	ENSMUSP00000031913	TRANSLATION	protein_coding	-	CCDS20044.1	1	246	26	4.5	13.1	272.6	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000076471	Trbv14	ENSMUST00000103272	ENSMUSP00000100088	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	53.1	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000094094	Igkv5-45	ENSMUST00000103366	ENSMUSP00000100167	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.5	0	56.9	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000038521	C1s1	ENSMUST00000160505	ENSMUSP00000125531	TRANSLATION	protein_coding	-	CCDS51907.1	1	694	20	9.8	0.5	429.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038521	C1s1	ENSMUST00000162844	ENSMUSP00000124109	TRANSLATION	protein_coding	stop	-	2	27	0	0.3	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000038521	C1s1	ENSMUST00000162443	ENSMUSP00000125712	TRANSLATION	protein_coding	-	CCDS51907.1	1	694	20	9.8	0.5	429.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038521	C1s1	ENSMUST00000159143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038521	C1s1	ENSMUST00000159463	ENSMUSP00000125439	TRANSLATION	protein_coding	stop	-	3	136	8	2.3	0	65.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000113146	ENSMUSP00000108771	TRANSLATION	protein_coding	-	CCDS20412.2	1	648	7	0	0.5	21.9	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000030269	Mtmr14	ENSMUST00000156141	ENSMUSP00000116918	TRANSLATION	protein_coding	stop	-	5	189	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000151149	ENSMUSP00000116882	TRANSLATION	protein_coding	start	-	3	142	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000129883	ENSMUSP00000114575	TRANSLATION	nonsense_mediated_decay	-	-	1	331	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000134945	ENSMUSP00000118001	TRANSLATION	protein_coding	start	-	1	264	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000148523	ENSMUSP00000115808	TRANSLATION	nonsense_mediated_decay	start	-	5	119	7	0	0	21.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000137772	ENSMUSP00000119000	TRANSLATION	protein_coding	start/stop	-	5	298	7	0	0	21.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000142938	ENSMUSP00000121136	TRANSLATION	nonsense_mediated_decay	-	-	2	140	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000203385	ENSMUSP00000144940	TRANSLATION	nonsense_mediated_decay	start	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030269	Mtmr14	ENSMUST00000144976	ENSMUSP00000117843	TRANSLATION	nonsense_mediated_decay	start	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038253	Hoxa5	ENSMUST00000048794	ENSMUSP00000039012	TRANSLATION	protein_coding	-	CCDS20143.1	1	270	0	1	7.4	76.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000068699	Flnc	ENSMUST00000148404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068699	Flnc	ENSMUST00000101617	ENSMUSP00000099139	TRANSLATION	protein_coding	-	CCDS80503.1	1	2693	0	37.4292	7.5	1439.1	0	-4,-5	-	-	14.202	ALTERNATIVE:1
ENSMUSG00000068699	Flnc	ENSMUST00000065090	ENSMUSP00000064163	TRANSLATION	protein_coding	-	CCDS39452.1	1	2726	0	37.8292	3.9	1439.1	0	-4,-5	-	-	13.338	PRINCIPAL:3
ENSMUSG00000001376	Vps50	ENSMUST00000184461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001376	Vps50	ENSMUST00000184959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001376	Vps50	ENSMUST00000183532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001376	Vps50	ENSMUST00000184780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001376	Vps50	ENSMUST00000164052	ENSMUSP00000125872	TRANSLATION	protein_coding	-	CCDS51713.1	1	929	0	0	0.5	651.5	0	-4,-6	-	-	3.642	MINOR
ENSMUSG00000001376	Vps50	ENSMUST00000001412	ENSMUSP00000001412	TRANSLATION	protein_coding	-	CCDS39415.1	1	964	0	0	6.3	690.8	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000001376	Vps50	ENSMUST00000183935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001376	Vps50	ENSMUST00000184411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001376	Vps50	ENSMUST00000170873	ENSMUSP00000128323	TRANSLATION	protein_coding	-	CCDS51714.1	1	938	0	0	0.5	650.8	0	-4,-6	-	-	3.6	MINOR
ENSMUSG00000092164	Rergl	ENSMUST00000170650	ENSMUSP00000131303	TRANSLATION	protein_coding	-	CCDS51946.1	1	204	15	2.84	6.3	96.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000029919	Hpgds	ENSMUST00000031982	ENSMUSP00000031982	TRANSLATION	protein_coding	-	CCDS20205.1	1	199	11	5	7.5	92.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000029919	Hpgds	ENSMUST00000205250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029919	Hpgds	ENSMUST00000170252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030226	Lmo3	ENSMUST00000160050	ENSMUSP00000124722	TRANSLATION	nonsense_mediated_decay	-	-	5	60	7	1.132	0	41.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030226	Lmo3	ENSMUST00000163065	ENSMUSP00000124762	TRANSLATION	protein_coding	-	-	3	156	16	3.63	11.6	112.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000030226	Lmo3	ENSMUST00000162932	ENSMUSP00000124514	TRANSLATION	protein_coding	stop	-	2	68	8	1.5	0	55.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030226	Lmo3	ENSMUST00000162772	ENSMUSP00000125335	TRANSLATION	protein_coding	-	CCDS20669.1	1	145	16	3.63	11.6	112.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000030226	Lmo3	ENSMUST00000162185	ENSMUSP00000124105	TRANSLATION	protein_coding	stop	-	3	108	12	2.83	0	91.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030226	Lmo3	ENSMUST00000203435	ENSMUSP00000145048	TRANSLATION	protein_coding	-	CCDS20669.1	5	145	16	3.63	11.6	112.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000030226	Lmo3	ENSMUST00000163024	ENSMUSP00000125589	TRANSLATION	protein_coding	-	CCDS20669.1	1	145	16	3.63	11.6	112.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000030226	Lmo3	ENSMUST00000161450	ENSMUSP00000124862	TRANSLATION	protein_coding	-	CCDS20669.1	5	145	16	3.63	11.6	112.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000029994	Anxa4	ENSMUST00000135921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029994	Anxa4	ENSMUST00000113675	ENSMUSP00000109305	TRANSLATION	protein_coding	-	CCDS39543.1	1	319	27	9.83	10.8	347.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029994	Anxa4	ENSMUST00000204398	ENSMUSP00000144961	TRANSLATION	protein_coding	stop	-	3	258	24	8.08	0	260.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029994	Anxa4	ENSMUST00000127152	ENSMUSP00000138194	TRANSLATION	nonsense_mediated_decay	-	-	5	196	13	6.03	0.5	169.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029994	Anxa4	ENSMUST00000155456	ENSMUSP00000117378	TRANSLATION	protein_coding	start	-	5	215	18	6.5	0	233.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029994	Anxa4	ENSMUST00000123732	ENSMUSP00000115346	TRANSLATION	protein_coding	stop	-	5	254	21	7.83	0	201.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029994	Anxa4	ENSMUST00000129772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029994	Anxa4	ENSMUST00000204441	ENSMUSP00000145421	TRANSLATION	protein_coding	stop	-	5	273	24	8.58	0	285.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029994	Anxa4	ENSMUST00000001187	ENSMUSP00000001187	TRANSLATION	protein_coding	-	CCDS39543.1	1	319	27	9.83	10.8	347.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030102	Itpr1	ENSMUST00000203995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030102	Itpr1	ENSMUST00000203288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030102	Itpr1	ENSMUST00000205053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030102	Itpr1	ENSMUST00000032192	ENSMUSP00000032192	TRANSLATION	protein_coding	-	CCDS51869.1	1	2749	8	58.74	7.6	968	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000030102	Itpr1	ENSMUST00000203615	ENSMUSP00000144880	TRANSLATION	protein_coding	-	-	5	2748	8	58.64	7.6	968	0	-4,-5	-	-	20.802	ALTERNATIVE:1
ENSMUSG00000030102	Itpr1	ENSMUST00000203530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030102	Itpr1	ENSMUST00000203638	ENSMUSP00000145522	TRANSLATION	protein_coding	start/stop	-	5	313	0	6.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030102	Itpr1	ENSMUST00000205005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030102	Itpr1	ENSMUST00000203687	ENSMUSP00000145339	TRANSLATION	protein_coding	start/stop	-	5	152	0	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030102	Itpr1	ENSMUST00000212125	ENSMUSP00000148284	TRANSLATION	nonsense_mediated_decay	start	-	5	213	0	4.085	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030102	Itpr1	ENSMUST00000203936	ENSMUSP00000145526	TRANSLATION	protein_coding	start/stop	-	3	215	4	5.33	0	238.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030102	Itpr1	ENSMUST00000205048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030102	Itpr1	ENSMUST00000203262	ENSMUSP00000145177	TRANSLATION	protein_coding	start/stop	-	5	225	0	6.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076606	Igkj3	ENSMUST00000199487	ENSMUSP00000143592	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076606	Igkj3	ENSMUST00000103407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071553	Cpa2	ENSMUST00000096066	ENSMUSP00000093771	TRANSLATION	protein_coding	-	CCDS19974.1	5	417	9	9.95	1.5	390.1	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000071553	Cpa2	ENSMUST00000144282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071553	Cpa2	ENSMUST00000126426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071553	Cpa2	ENSMUST00000146936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071553	Cpa2	ENSMUST00000123588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071553	Cpa2	ENSMUST00000142653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071553	Cpa2	ENSMUST00000131137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071553	Cpa2	ENSMUST00000133009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076526	Igkv12-98	ENSMUST00000103327	ENSMUSP00000100128	TRANSLATION	IG_V_gene	stop	-	-	114	2	1.3	0	52	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076526	Igkv12-98	ENSMUST00000196839	ENSMUSP00000143549	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.3	0	52	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000052962	Mrpl35	ENSMUST00000205758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052962	Mrpl35	ENSMUST00000205435	ENSMUSP00000146077	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0.5	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000052962	Mrpl35	ENSMUST00000065103	ENSMUSP00000066493	TRANSLATION	protein_coding	-	CCDS20234.1	1	188	0	3.5	7.5	55.6	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000105630	Gm42543	ENSMUST00000198756	ENSMUSP00000142898	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	45.7	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076583	Igkv8-24	ENSMUST00000103384	ENSMUSP00000100185	TRANSLATION	IG_V_gene	stop	-	-	121	0	1.5	0	63	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076522	Igkv16-104	ENSMUST00000103323	ENSMUSP00000100124	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	60.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030109	Slc6a12	ENSMUST00000168295	ENSMUSP00000129389	TRANSLATION	protein_coding	stop	-	5	63	0	1	0	39.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030109	Slc6a12	ENSMUST00000032200	ENSMUSP00000032200	TRANSLATION	protein_coding	-	CCDS39616.1	1	628	0	12.4	1.5	798.3	16	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000030109	Slc6a12	ENSMUST00000170582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030109	Slc6a12	ENSMUST00000171008	ENSMUSP00000126708	TRANSLATION	protein_coding	-	-	5	557	0	11.6	1.2	748.1	14	-4,-5	-	-	7.386	MINOR
ENSMUSG00000030109	Slc6a12	ENSMUST00000166390	ENSMUSP00000128217	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030109	Slc6a12	ENSMUST00000170339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030109	Slc6a12	ENSMUST00000165456	ENSMUSP00000130715	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	1	0	60.7	2	0,-4	-	-	-1	MINOR
ENSMUSG00000030109	Slc6a12	ENSMUST00000163771	ENSMUSP00000127779	TRANSLATION	nonsense_mediated_decay	start	-	5	130	0	3.33	0	205.9	5	0,-4	-	-	-1	MINOR
ENSMUSG00000030109	Slc6a12	ENSMUST00000166457	ENSMUSP00000126937	TRANSLATION	protein_coding	-	-	1	614	0	12.4	2.9	798.3	16	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030109	Slc6a12	ENSMUST00000171874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030059	Tmf1	ENSMUST00000095664	ENSMUSP00000093325	TRANSLATION	protein_coding	-	CCDS39575.1	1	1091	7	0	1.5	185.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030059	Tmf1	ENSMUST00000204190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030059	Tmf1	ENSMUST00000124173	ENSMUSP00000120093	TRANSLATION	nonsense_mediated_decay	-	-	5	784	7	0	0	75.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059878	Zfp422	ENSMUST00000112880	ENSMUSP00000108501	TRANSLATION	protein_coding	-	CCDS20459.1	1	237	20	0.8	1.5	130.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000059878	Zfp422	ENSMUST00000204557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059878	Zfp422	ENSMUST00000057540	ENSMUSP00000084926	TRANSLATION	protein_coding	-	CCDS20459.1	1	237	20	0.8	1.5	130.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000059878	Zfp422	ENSMUST00000079749	ENSMUSP00000078685	TRANSLATION	protein_coding	-	CCDS20459.1	1	237	20	0.8	1.5	130.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000049107	Ntf3	ENSMUST00000204542	ENSMUSP00000144828	TRANSLATION	protein_coding	-	CCDS51914.1	1	271	0	1	8.4	173.3	1	-2,-4	-	-	15	ALTERNATIVE:1
ENSMUSG00000049107	Ntf3	ENSMUST00000112244	ENSMUSP00000107863	TRANSLATION	protein_coding	-	CCDS51914.1	3	271	0	1	8.4	173.3	1	-2,-4	-	-	15	ALTERNATIVE:1
ENSMUSG00000049107	Ntf3	ENSMUST00000050484	ENSMUSP00000052302	TRANSLATION	protein_coding	-	CCDS20553.1	2	258	0	1	7.2	173.3	0	2,-3	-	-	14.514	PRINCIPAL:3
ENSMUSG00000030201	Lrp6	ENSMUST00000032322	ENSMUSP00000032322	TRANSLATION	protein_coding	-	CCDS39678.1	1	1613	16	17.7	9.6	671.5	0	3,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000030201	Lrp6	ENSMUST00000126836	ENSMUSP00000144733	TRANSLATION	protein_coding	stop	-	5	131	0	2	0	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030201	Lrp6	ENSMUST00000203016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030201	Lrp6	ENSMUST00000111950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030201	Lrp6	ENSMUST00000203235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030201	Lrp6	ENSMUST00000203773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076483	Trbj1-1	ENSMUST00000103284	ENSMUSP00000141314	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096887	Gm20594	ENSMUST00000179797	ENSMUSP00000136098	TRANSLATION	protein_coding	-	CCDS57431.1	-	37	0	0	0.5	56.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029885	Moxd2	ENSMUST00000031937	ENSMUSP00000031937	TRANSLATION	protein_coding	-	CCDS20039.1	1	619	5	7.78	0.5	324.8	0	3,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000030303	Far2	ENSMUST00000111607	ENSMUSP00000107234	TRANSLATION	protein_coding	-	CCDS39718.1	1	502	28	2.19	0.5	363.9	0	-4,-6	-	-	18	MINOR
ENSMUSG00000030303	Far2	ENSMUST00000203278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030303	Far2	ENSMUST00000032443	ENSMUSP00000032443	TRANSLATION	protein_coding	-	CCDS85188.1	1	515	28	2.19	8.8	363.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030042	Pole4	ENSMUST00000160281	ENSMUSP00000124357	TRANSLATION	protein_coding	-	-	1	119	0	1.7	5.1	51.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000030042	Pole4	ENSMUST00000141138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030042	Pole4	ENSMUST00000140281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030042	Pole4	ENSMUST00000095786	ENSMUSP00000093462	TRANSLATION	protein_coding	-	CCDS39524.1	1	118	0	1.7	5.1	51.6	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000030042	Pole4	ENSMUST00000161309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044378	Slc15a5	ENSMUST00000111873	ENSMUSP00000107504	TRANSLATION	protein_coding	start	-	1	228	0	2.19	0	42.4	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000044378	Slc15a5	ENSMUST00000141280	ENSMUSP00000145169	TRANSLATION	protein_coding	start	-	2	109	0	1.14	0	32.9	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000044378	Slc15a5	ENSMUST00000171804	ENSMUSP00000129239	TRANSLATION	protein_coding	-	-	5	566	0	4.5	0.5	74	14	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044378	Slc15a5	ENSMUST00000150278	ENSMUSP00000145205	TRANSLATION	protein_coding	start	-	5	69	0	0.42	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000044378	Slc15a5	ENSMUST00000050132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044378	Slc15a5	ENSMUST00000154461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038390	Gpr162	ENSMUST00000046893	ENSMUSP00000038536	TRANSLATION	protein_coding	-	CCDS20534.1	1	588	0	0	6.3	66.3	7	-2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000038390	Gpr162	ENSMUST00000204667	ENSMUSP00000145267	TRANSLATION	protein_coding	-	CCDS20534.1	1	588	0	0	6.3	66.3	7	-2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000038390	Gpr162	ENSMUST00000204161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038390	Gpr162	ENSMUST00000204253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094420	Igkv10-96	ENSMUST00000103328	ENSMUSP00000100129	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	62.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000057103	Nat8f1	ENSMUST00000172982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057103	Nat8f1	ENSMUST00000174369	ENSMUSP00000133475	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000057103	Nat8f1	ENSMUST00000161198	ENSMUSP00000124488	TRANSLATION	protein_coding	-	-	1	222	22	0.6	1	50.7	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000057103	Nat8f1	ENSMUST00000239124	ENSMUSP00000158936	TRANSLATION	protein_coding	-	CCDS20304.2	-	232	22	0.6	1.5	50.7	1	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000059934	Prh1	ENSMUST00000074042	ENSMUSP00000073689	TRANSLATION	protein_coding	-	-	5	261	0	0	0	27.1	0	3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000059934	Prh1	ENSMUST00000177523	ENSMUSP00000135877	TRANSLATION	protein_coding	-	CCDS57460.1	5	289	0	0	0.5	27.1	0	3,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000059934	Prh1	ENSMUST00000111972	ENSMUSP00000107603	TRANSLATION	protein_coding	-	CCDS57460.1	5	289	0	0	0.5	27.1	0	3,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000014747	Ankrd53	ENSMUST00000206496	ENSMUSP00000145973	TRANSLATION	protein_coding	stop	-	1	354	0	2.46	0	58	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014747	Ankrd53	ENSMUST00000014891	ENSMUSP00000014891	TRANSLATION	protein_coding	-	CCDS20284.1	1	497	0	2.86	0.5	45.8	0	-4,-7	-	-	10.74	PRINCIPAL:1
ENSMUSG00000057592	Vmn1r48	ENSMUST00000073415	ENSMUSP00000073121	TRANSLATION	protein_coding	-	CCDS20350.1	-	302	0	0	0.5	427.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000067825	Pex26	ENSMUST00000120066	ENSMUSP00000113233	TRANSLATION	protein_coding	-	CCDS80603.1	1	304	0	0	0.5	449.1	1	-4,-6	-	-	5.538	ALTERNATIVE:2
ENSMUSG00000067825	Pex26	ENSMUST00000139393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067825	Pex26	ENSMUST00000125633	ENSMUSP00000117444	TRANSLATION	nonsense_mediated_decay	-	-	1	305	0	0	0.5	456.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000067825	Pex26	ENSMUST00000088561	ENSMUSP00000085921	TRANSLATION	protein_coding	-	CCDS20488.1	1	305	0	0	0.5	456.8	1	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000067825	Pex26	ENSMUST00000118234	ENSMUSP00000113981	TRANSLATION	protein_coding	-	CCDS80604.1	1	166	0	0	0.5	187	0	-4,-6	-	-	0	MINOR
ENSMUSG00000067825	Pex26	ENSMUST00000137432	ENSMUSP00000119048	TRANSLATION	protein_coding	stop	-	3	180	0	0	0	293.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000076598	Igkv3-7	ENSMUST00000197560	ENSMUSP00000142610	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	73.5	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076598	Igkv3-7	ENSMUST00000103399	ENSMUSP00000100200	TRANSLATION	IG_V_gene	start/stop	-	-	99	0	1	0	73.5	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000048206	Dnajb8	ENSMUST00000061866	ENSMUSP00000056592	TRANSLATION	protein_coding	-	CCDS20334.1	-	227	0	1	0.5	99.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048206	Dnajb8	ENSMUST00000203827	ENSMUSP00000145239	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063975	Slco1a5	ENSMUST00000081380	ENSMUSP00000080116	TRANSLATION	protein_coding	-	CCDS57464.1	1	670	0	0	1.5	629.2	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000063975	Slco1a5	ENSMUST00000128446	ENSMUSP00000124987	TRANSLATION	protein_coding	stop	-	5	157	0	0	0	177.4	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000063975	Slco1a5	ENSMUST00000111825	ENSMUSP00000137607	TRANSLATION	protein_coding	-	CCDS57464.1	1	670	0	0	1.5	629.2	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000063975	Slco1a5	ENSMUST00000153268	ENSMUSP00000124829	TRANSLATION	nonsense_mediated_decay	-	-	5	95	0	0	0	38.8	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000063975	Slco1a5	ENSMUST00000111822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045291	E330021D16Rik	ENSMUST00000204830	ENSMUSP00000145343	TRANSLATION	protein_coding	-	CCDS51940.1	1	371	0	1	1.5	60.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045291	E330021D16Rik	ENSMUST00000203392	ENSMUSP00000144858	TRANSLATION	protein_coding	stop	-	2	112	0	0	0	24	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045291	E330021D16Rik	ENSMUST00000058713	ENSMUSP00000060726	TRANSLATION	protein_coding	-	CCDS51940.1	-	371	0	1	1.5	60.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000012483	Rpa3	ENSMUST00000012627	ENSMUSP00000012627	TRANSLATION	protein_coding	-	CCDS19909.1	1	121	0	3.5	7.5	112.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000012483	Rpa3	ENSMUST00000159594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069678	Pcgf1	ENSMUST00000092614	ENSMUSP00000090277	TRANSLATION	protein_coding	-	CCDS20270.1	1	247	8	6.61	1.5	88.7	0	-4,-7	-	-	18.204	MINOR
ENSMUSG00000069678	Pcgf1	ENSMUST00000176100	ENSMUSP00000135882	TRANSLATION	protein_coding	stop	-	3	52	2	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069678	Pcgf1	ENSMUST00000177177	ENSMUSP00000135291	TRANSLATION	protein_coding	-	-	1	176	0	5.11	1.2	52.1	0	-4,-5	-	-	6.603	MINOR
ENSMUSG00000069678	Pcgf1	ENSMUST00000165164	ENSMUSP00000130614	TRANSLATION	protein_coding	-	-	1	259	8	6.61	8.3	88.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000069678	Pcgf1	ENSMUST00000176089	ENSMUSP00000135268	TRANSLATION	protein_coding	-	-	5	108	0	3.198	0	42.8	0	-4,-5	-	-	2.898	MINOR
ENSMUSG00000069678	Pcgf1	ENSMUST00000176027	ENSMUSP00000135664	TRANSLATION	nonsense_mediated_decay	-	-	5	106	0	2.78	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069678	Pcgf1	ENSMUST00000176372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069678	Pcgf1	ENSMUST00000204211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025608	Podxl	ENSMUST00000136877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025608	Podxl	ENSMUST00000026698	ENSMUSP00000026698	TRANSLATION	protein_coding	-	CCDS19983.1	1	503	0	0	0.5	233.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000042097	Zfp239	ENSMUST00000112857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042097	Zfp239	ENSMUST00000172088	ENSMUSP00000128270	TRANSLATION	protein_coding	-	CCDS20466.1	2	201	28	1	1.5	174.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042097	Zfp239	ENSMUST00000141657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042097	Zfp239	ENSMUST00000136316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042097	Zfp239	ENSMUST00000079405	ENSMUSP00000078374	TRANSLATION	protein_coding	-	CCDS20466.1	1	201	28	1	1.5	174.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042097	Zfp239	ENSMUST00000150936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042097	Zfp239	ENSMUST00000134619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068341	Reg3d	ENSMUST00000167492	ENSMUSP00000132220	TRANSLATION	protein_coding	-	CCDS51815.1	5	129	0	3.2	0.5	32.8	0	4,-1	-	-	7.128	MINOR
ENSMUSG00000068341	Reg3d	ENSMUST00000205240	ENSMUSP00000144715	TRANSLATION	protein_coding	-	CCDS51815.1	2	129	0	3.2	0.5	32.8	0	4,-1	-	-	7.128	MINOR
ENSMUSG00000068341	Reg3d	ENSMUST00000089667	ENSMUSP00000087096	TRANSLATION	protein_coding	-	CCDS20254.1	1	175	0	4.2	0.5	62.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040669	Phc1	ENSMUST00000112600	ENSMUSP00000108219	TRANSLATION	protein_coding	-	CCDS39620.1	1	958	4	3.4	0.5	158.8	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000040669	Phc1	ENSMUST00000161290	ENSMUSP00000125110	TRANSLATION	nonsense_mediated_decay	start	-	3	69	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000161210	ENSMUSP00000124795	TRANSLATION	protein_coding	stop	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000161877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040669	Phc1	ENSMUST00000161054	ENSMUSP00000123911	TRANSLATION	protein_coding	-	CCDS39620.1	1	958	4	3.4	0.5	158.8	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000040669	Phc1	ENSMUST00000159657	ENSMUSP00000123957	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000160863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040669	Phc1	ENSMUST00000161739	ENSMUSP00000125568	TRANSLATION	protein_coding	-	CCDS20494.1	1	1010	4	3.4	0.5	158.8	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000040669	Phc1	ENSMUST00000160696	ENSMUSP00000125580	TRANSLATION	protein_coding	-	CCDS20494.1	1	1010	4	3.4	0.5	158.8	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000040669	Phc1	ENSMUST00000161149	ENSMUSP00000125717	TRANSLATION	protein_coding	stop	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000159252	ENSMUSP00000124678	TRANSLATION	protein_coding	-	-	5	965	4	3.4	0	158.8	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000040669	Phc1	ENSMUST00000160163	ENSMUSP00000125545	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000160843	ENSMUSP00000125030	TRANSLATION	protein_coding	stop	-	5	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000159384	ENSMUSP00000124744	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040669	Phc1	ENSMUST00000081849	ENSMUSP00000080532	TRANSLATION	protein_coding	-	CCDS39620.1	5	958	4	3.4	0.5	158.8	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000040669	Phc1	ENSMUST00000079560	ENSMUSP00000078514	TRANSLATION	protein_coding	-	CCDS20494.1	1	1010	4	3.4	0.5	158.8	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000076536	Igkv4-86	ENSMUST00000200454	ENSMUSP00000143537	TRANSLATION	IG_V_gene	stop	-	-	114	0	1.5	0	55.4	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076536	Igkv4-86	ENSMUST00000103337	ENSMUSP00000100138	TRANSLATION	IG_V_gene	stop	-	-	113	0	1.5	0	55.4	0	1,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000068231	Vmn1r43	ENSMUST00000226240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068231	Vmn1r43	ENSMUST00000089418	ENSMUSP00000086839	TRANSLATION	protein_coding	-	CCDS57440.1	-	329	0	0	1.5	411.7	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068231	Vmn1r43	ENSMUST00000226983	ENSMUSP00000153713	TRANSLATION	protein_coding	-	CCDS57440.1	-	329	0	0	1.5	411.7	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068231	Vmn1r43	ENSMUST00000226741	ENSMUSP00000154439	TRANSLATION	protein_coding	-	CCDS57440.1	-	329	0	0	1.5	411.7	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068231	Vmn1r43	ENSMUST00000228709	ENSMUSP00000154510	TRANSLATION	protein_coding	-	CCDS57440.1	-	329	0	0	1.5	411.7	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037709	Fam13a	ENSMUST00000204616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037709	Fam13a	ENSMUST00000173193	ENSMUSP00000134135	TRANSLATION	protein_coding	-	-	5	665	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000037709	Fam13a	ENSMUST00000174307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037709	Fam13a	ENSMUST00000173712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037709	Fam13a	ENSMUST00000089860	ENSMUSP00000087304	TRANSLATION	protein_coding	-	CCDS39499.1	1	693	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000115792	Vmn1r16	ENSMUST00000227168	ENSMUSP00000154001	TRANSLATION	protein_coding	-	CCDS20179.1	-	303	0	0	1.5	188.6	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115792	Vmn1r16	ENSMUST00000227283	ENSMUSP00000154566	TRANSLATION	protein_coding	-	CCDS20179.1	-	303	0	0	1.5	188.6	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115792	Vmn1r16	ENSMUST00000228356	ENSMUSP00000154643	TRANSLATION	protein_coding	-	-	-	286	0	0	0	164.9	5	-2,-5	-	-	4.578	MINOR
ENSMUSG00000036899	Trpv5	ENSMUST00000193503	ENSMUSP00000141421	TRANSLATION	protein_coding	-	-	5	674	0	12.05	0	123.2	6	-4,-7	-	-	10.002	MINOR
ENSMUSG00000036899	Trpv5	ENSMUST00000031901	ENSMUSP00000031901	TRANSLATION	protein_coding	-	CCDS20053.1	1	723	0	13.05	1.5	122.7	6	-4,-7	-	-	11.97	PRINCIPAL:1
ENSMUSG00000003154	Foxj2	ENSMUST00000003238	ENSMUSP00000003238	TRANSLATION	protein_coding	-	CCDS20503.1	1	565	0	1.94	0.5	126.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003154	Foxj2	ENSMUST00000203075	ENSMUSP00000145438	TRANSLATION	protein_coding	stop	-	3	205	0	1.8	0	126.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003154	Foxj2	ENSMUST00000177927	ENSMUSP00000137645	TRANSLATION	protein_coding	-	CCDS20503.1	5	565	0	1.94	0.5	126.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057278	Snrpg	ENSMUST00000203782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057278	Snrpg	ENSMUST00000089558	ENSMUSP00000086987	TRANSLATION	protein_coding	-	CCDS39541.1	1	76	5	2.16	21.5	80	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000057278	Snrpg	ENSMUST00000204380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057278	Snrpg	ENSMUST00000204768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076493	Trbj2-2	ENSMUST00000103294	ENSMUSP00000141782	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079262	Slco1a6	ENSMUST00000111827	ENSMUSP00000107458	TRANSLATION	protein_coding	-	CCDS39693.1	1	670	0	0	0.5	609.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000079262	Slco1a6	ENSMUST00000173877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079262	Slco1a6	ENSMUST00000172984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079262	Slco1a6	ENSMUST00000174455	ENSMUSP00000134565	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037973	Itprid1	ENSMUST00000169699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037973	Itprid1	ENSMUST00000044729	ENSMUSP00000045332	TRANSLATION	protein_coding	-	CCDS39493.1	1	1034	0	0	0.5	266.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072872	Rybp	ENSMUST00000101118	ENSMUSP00000098677	TRANSLATION	protein_coding	-	CCDS39579.1	1	228	4	2	9.3	104	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000072872	Rybp	ENSMUST00000203410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072872	Rybp	ENSMUST00000205164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061769	Klra6	ENSMUST00000074056	ENSMUSP00000073700	TRANSLATION	protein_coding	-	CCDS20597.1	1	266	3	4.2	0.5	228.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000076505	Igkv1-131	ENSMUST00000103306	ENSMUSP00000100107	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	56.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030365	Clec2i	ENSMUST00000032519	ENSMUSP00000032519	TRANSLATION	protein_coding	-	CCDS51920.1	1	217	0	3.45	0.5	45.1	1	-4,-6	-	-	11.958	PRINCIPAL:3
ENSMUSG00000030365	Clec2i	ENSMUST00000159080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030365	Clec2i	ENSMUST00000159866	ENSMUSP00000123804	TRANSLATION	protein_coding	-	CCDS71844.1	1	221	0	3.45	0.5	45.1	1	-4,-6	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000030365	Clec2i	ENSMUST00000160867	ENSMUSP00000145115	TRANSLATION	protein_coding	-	CCDS85166.1	1	156	0	3.3	0.5	45.4	0	-1,-4	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000030365	Clec2i	ENSMUST00000162666	ENSMUSP00000124910	TRANSLATION	protein_coding	-	CCDS80618.1	1	246	0	3.45	0.5	45.1	1	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000029754	Dlx6	ENSMUST00000031768	ENSMUSP00000031768	TRANSLATION	protein_coding	start	-	1	158	0	1.4	0	73.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029754	Dlx6	ENSMUST00000160937	ENSMUSP00000124204	TRANSLATION	protein_coding	-	CCDS51719.1	1	297	0	1.4	2.7	73.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029754	Dlx6	ENSMUST00000171311	ENSMUSP00000128585	TRANSLATION	protein_coding	-	CCDS51719.1	1	297	0	1.4	2.7	73.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029754	Dlx6	ENSMUST00000172943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059430	Actg2	ENSMUST00000124933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059430	Actg2	ENSMUST00000152029	ENSMUSP00000121577	TRANSLATION	protein_coding	stop	-	2	195	12	4.75	0	258.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059430	Actg2	ENSMUST00000075161	ENSMUSP00000074658	TRANSLATION	protein_coding	-	CCDS51822.1	1	376	24	8.58	21.5	495.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059430	Actg2	ENSMUST00000205926	ENSMUSP00000146302	TRANSLATION	protein_coding	stop	-	3	195	9	4.415	0	209.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059430	Actg2	ENSMUST00000121731	ENSMUSP00000113552	TRANSLATION	protein_coding	-	CCDS51822.1	5	376	24	8.58	21.5	495.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059430	Actg2	ENSMUST00000141904	ENSMUSP00000120936	TRANSLATION	protein_coding	stop	-	2	221	15	5.58	0	270.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038665	Dgki	ENSMUST00000042075	ENSMUSP00000047858	TRANSLATION	protein_coding	-	-	5	899	18	5.231	0	349	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038665	Dgki	ENSMUST00000090314	ENSMUSP00000087788	TRANSLATION	protein_coding	-	CCDS85032.1	5	1050	18	5.231	1.5	349	0	-2,1	-	-	18	ALTERNATIVE:2
ENSMUSG00000038665	Dgki	ENSMUST00000101532	ENSMUSP00000099071	TRANSLATION	protein_coding	-	CCDS39459.1	1	1071	18	5.231	1.5	349	0	-2,1	-	-	18	PRINCIPAL:3
ENSMUSG00000038665	Dgki	ENSMUST00000143046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038665	Dgki	ENSMUST00000150300	ENSMUSP00000138457	TRANSLATION	nonsense_mediated_decay	-	-	5	591	18	1.985	0	212.3	0	-2,1	-	-	-1	MINOR
ENSMUSG00000038665	Dgki	ENSMUST00000146656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038665	Dgki	ENSMUST00000136457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038665	Dgki	ENSMUST00000138286	ENSMUSP00000138628	TRANSLATION	nonsense_mediated_decay	-	-	5	841	18	1.985	0	303.7	0	-2,1	-	-	-1	MINOR
ENSMUSG00000107071	Gm42420	ENSMUST00000126621	ENSMUSP00000144288	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000094669	Olfr441	ENSMUST00000213649	ENSMUSP00000150572	TRANSLATION	protein_coding	-	CCDS20086.1	3	310	0	0.42	6.3	200.9	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094669	Olfr441	ENSMUST00000095954	ENSMUSP00000093648	TRANSLATION	protein_coding	-	CCDS20086.1	-	310	0	0.42	6.3	200.9	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000076514	Igkv17-121	ENSMUST00000103315	ENSMUSP00000100116	TRANSLATION	IG_V_gene	stop	-	-	116	0	1.75	0	42	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076514	Igkv17-121	ENSMUST00000197515	ENSMUSP00000143096	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	42	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000030287	Itpr2	ENSMUST00000145418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030287	Itpr2	ENSMUST00000053273	ENSMUSP00000049584	TRANSLATION	protein_coding	-	CCDS39709.1	1	2701	8	51.09	6.4	951.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000030287	Itpr2	ENSMUST00000079573	ENSMUSP00000078526	TRANSLATION	protein_coding	-	CCDS39708.1	1	2668	8	50.09	0.5	883.5	0	-4,-7	-	-	11.904	MINOR
ENSMUSG00000030287	Itpr2	ENSMUST00000204901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030287	Itpr2	ENSMUST00000144557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030287	Itpr2	ENSMUST00000111673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030287	Itpr2	ENSMUST00000131890	ENSMUSP00000121773	TRANSLATION	protein_coding	start	-	1	633	4	11.35	0	276.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030287	Itpr2	ENSMUST00000137938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030287	Itpr2	ENSMUST00000203292	ENSMUSP00000144726	TRANSLATION	protein_coding	start/stop	-	3	192	0	4.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030287	Itpr2	ENSMUST00000155339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030287	Itpr2	ENSMUST00000139732	ENSMUSP00000119110	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	1.06	0	31.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056429	Tgoln1	ENSMUST00000070524	ENSMUSP00000068487	TRANSLATION	protein_coding	-	CCDS51811.1	1	353	0	0	0.5	0	0	4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000050786	Ccdc126	ENSMUST00000114491	ENSMUSP00000110135	TRANSLATION	protein_coding	-	CCDS80531.1	5	103	0	0	0.5	136.7	0	-1,-4	-	-	0	MINOR
ENSMUSG00000050786	Ccdc126	ENSMUST00000055559	ENSMUSP00000058077	TRANSLATION	protein_coding	-	CCDS20125.1	1	140	0	0	8.8	243.5	0	-1,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000054474	Thnsl2	ENSMUST00000074241	ENSMUSP00000073861	TRANSLATION	protein_coding	-	CCDS20225.1	5	483	15	7.12	1.5	144.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000054474	Thnsl2	ENSMUST00000170753	ENSMUSP00000129994	TRANSLATION	protein_coding	start/stop	-	2	159	5	2.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054474	Thnsl2	ENSMUST00000160918	ENSMUSP00000124423	TRANSLATION	protein_coding	-	CCDS20225.1	1	483	15	7.12	1.5	144.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000054474	Thnsl2	ENSMUST00000170455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030148	Clec4a2	ENSMUST00000161365	ENSMUSP00000124615	TRANSLATION	protein_coding	-	CCDS20510.1	1	238	5	3.3	0.5	73.4	2	-4,-5	-	-	16.28	PRINCIPAL:3
ENSMUSG00000030148	Clec4a2	ENSMUST00000161636	ENSMUSP00000123973	TRANSLATION	protein_coding	stop	-	5	74	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000030148	Clec4a2	ENSMUST00000032248	ENSMUSP00000032248	TRANSLATION	protein_coding	-	CCDS51894.1	1	262	5	3.66	0.5	73.4	2	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000030148	Clec4a2	ENSMUST00000159891	ENSMUSP00000124532	TRANSLATION	protein_coding	stop	-	5	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030148	Clec4a2	ENSMUST00000041779	ENSMUSP00000045781	TRANSLATION	protein_coding	-	CCDS20510.1	1	238	5	3.3	0.5	73.4	2	-4,-5	-	-	16.28	PRINCIPAL:3
ENSMUSG00000056370	Sftpb	ENSMUST00000070437	ENSMUSP00000066805	TRANSLATION	protein_coding	-	-	5	376	0	2.53	0.5	153.7	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000056370	Sftpb	ENSMUST00000183278	ENSMUSP00000138485	TRANSLATION	nonsense_mediated_decay	-	-	5	241	0	2.45	0	127.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056370	Sftpb	ENSMUST00000182014	ENSMUSP00000138204	TRANSLATION	nonsense_mediated_decay	-	-	5	241	0	2.45	0	127.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056370	Sftpb	ENSMUST00000183018	ENSMUSP00000138695	TRANSLATION	protein_coding	-	CCDS71775.1	5	354	0	2.53	0.5	153.7	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000056370	Sftpb	ENSMUST00000182765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038028	Tigar	ENSMUST00000200988	ENSMUSP00000144435	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.33	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038028	Tigar	ENSMUST00000039913	ENSMUSP00000048643	TRANSLATION	protein_coding	-	CCDS20563.1	1	269	8	4.58	2.7	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000076479	Trbv26	ENSMUST00000103280	ENSMUSP00000100096	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	59.4	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076479	Trbv26	ENSMUST00000193064	ENSMUSP00000141897	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	59.4	0	2,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000001930	Vwf	ENSMUST00000141521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001930	Vwf	ENSMUST00000150548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001930	Vwf	ENSMUST00000134073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001930	Vwf	ENSMUST00000139678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001930	Vwf	ENSMUST00000147101	ENSMUSP00000138132	TRANSLATION	nonsense_mediated_decay	start	-	1	385	0	0	0	106.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001930	Vwf	ENSMUST00000100941	ENSMUSP00000098502	TRANSLATION	protein_coding	-	-	5	420	0	1.8	0	198.8	0	-1,-5	-	-	0	MINOR
ENSMUSG00000001930	Vwf	ENSMUST00000112254	ENSMUSP00000107873	TRANSLATION	protein_coding	-	CCDS20552.1	1	2813	4	11.4	1.5	1176.5	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000001930	Vwf	ENSMUST00000112253	ENSMUSP00000107872	TRANSLATION	protein_coding	-	-	1	405	0	1.8	0	198.8	0	4,-1	-	-	0	MINOR
ENSMUSG00000001930	Vwf	ENSMUST00000146264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001930	Vwf	ENSMUST00000129436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001930	Vwf	ENSMUST00000126709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068329	Htra2	ENSMUST00000204281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068329	Htra2	ENSMUST00000113963	ENSMUSP00000109596	TRANSLATION	protein_coding	-	-	5	426	12	6.99	0	110.4	0	-4,0	-	-	14.862	MINOR
ENSMUSG00000068329	Htra2	ENSMUST00000203339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068329	Htra2	ENSMUST00000154829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068329	Htra2	ENSMUST00000132099	ENSMUSP00000138148	TRANSLATION	nonsense_mediated_decay	start	-	3	137	8	2.08	0	61.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068329	Htra2	ENSMUST00000134606	ENSMUSP00000115547	TRANSLATION	protein_coding	start/stop	-	1	294	12	6.938	0	137.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068329	Htra2	ENSMUST00000150217	ENSMUSP00000118234	TRANSLATION	protein_coding	start/stop	-	5	249	11	5.96	0	99.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068329	Htra2	ENSMUST00000089645	ENSMUSP00000087073	TRANSLATION	protein_coding	-	CCDS20267.1	1	458	12	7.74	1.5	137.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000068329	Htra2	ENSMUST00000113962	ENSMUSP00000109595	TRANSLATION	protein_coding	-	-	5	361	9	5.99	0	40.3	0	-4,0	-	-	6.66	MINOR
ENSMUSG00000068329	Htra2	ENSMUST00000144058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068329	Htra2	ENSMUST00000122955	ENSMUSP00000138153	TRANSLATION	nonsense_mediated_decay	-	-	5	328	11	4.48	0	98.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030189	Ybx3	ENSMUST00000032309	ENSMUSP00000032309	TRANSLATION	protein_coding	-	CCDS20606.1	1	361	0	2.68	1.5	90.7	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000030189	Ybx3	ENSMUST00000205035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030189	Ybx3	ENSMUST00000203157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030189	Ybx3	ENSMUST00000204481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030189	Ybx3	ENSMUST00000087865	ENSMUSP00000085172	TRANSLATION	protein_coding	-	CCDS20605.1	1	292	0	2.68	0.5	90.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030278	Cidec	ENSMUST00000113091	ENSMUSP00000108714	TRANSLATION	protein_coding	-	-	3	249	0	2.9	6.3	101	0	-4,-2	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000030278	Cidec	ENSMUST00000113089	ENSMUSP00000108712	TRANSLATION	protein_coding	-	CCDS20418.1	1	239	0	2.9	7.5	101	0	-4,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000030278	Cidec	ENSMUST00000032416	ENSMUSP00000032416	TRANSLATION	protein_coding	-	CCDS20418.1	1	239	0	2.9	7.5	101	0	-4,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000030278	Cidec	ENSMUST00000133348	ENSMUSP00000122068	TRANSLATION	protein_coding	stop	-	3	83	0	1.9	0	37.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048693	Olfr435	ENSMUST00000215565	ENSMUSP00000150935	TRANSLATION	protein_coding	-	CCDS20090.1	5	313	0	0.42	5.2	205.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048693	Olfr435	ENSMUST00000058118	ENSMUSP00000058912	TRANSLATION	protein_coding	-	CCDS20090.1	-	313	0	0.42	5.2	205.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048284	Tas2r126	ENSMUST00000059534	ENSMUSP00000056581	TRANSLATION	protein_coding	-	CCDS20070.1	-	308	0	0	2.7	319.2	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000015053	Gata2	ENSMUST00000205151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015053	Gata2	ENSMUST00000170089	ENSMUSP00000128198	TRANSLATION	protein_coding	-	CCDS20333.1	1	480	8	2.6	7.5	106.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015053	Gata2	ENSMUST00000015197	ENSMUSP00000015197	TRANSLATION	protein_coding	-	CCDS20333.1	1	480	8	2.6	7.5	106.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015053	Gata2	ENSMUST00000203480	ENSMUSP00000145503	TRANSLATION	protein_coding	stop	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015053	Gata2	ENSMUST00000203579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115705	Vmn1r28	ENSMUST00000227805	ENSMUSP00000154482	TRANSLATION	protein_coding	-	CCDS20193.1	-	302	0	0	1.5	193.9	4	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000115705	Vmn1r28	ENSMUST00000226813	ENSMUSP00000153799	TRANSLATION	protein_coding	-	CCDS20193.1	-	302	0	0	1.5	193.9	4	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000115705	Vmn1r28	ENSMUST00000228678	ENSMUSP00000153785	TRANSLATION	protein_coding	-	CCDS20193.1	-	302	0	0	1.5	193.9	4	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046323	Dppa3	ENSMUST00000049644	ENSMUSP00000062832	TRANSLATION	protein_coding	-	CCDS20500.1	1	150	0	0	1.5	118.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046323	Dppa3	ENSMUST00000123429	ENSMUSP00000115252	TRANSLATION	protein_coding	start	-	5	141	0	0	0	85.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094993	Igkv4-51	ENSMUST00000103345	ENSMUSP00000100146	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	51	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030168	Adipor2	ENSMUST00000189710	ENSMUSP00000139895	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030168	Adipor2	ENSMUST00000169744	ENSMUSP00000126138	TRANSLATION	protein_coding	-	CCDS20473.1	1	386	0	5.06	5.1	240.8	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030168	Adipor2	ENSMUST00000188851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030168	Adipor2	ENSMUST00000187699	ENSMUSP00000139703	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0.06	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030168	Adipor2	ENSMUST00000032272	ENSMUSP00000032272	TRANSLATION	protein_coding	-	CCDS20473.1	1	386	0	5.06	5.1	240.8	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030237	Slco1a4	ENSMUST00000204676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030237	Slco1a4	ENSMUST00000165990	ENSMUSP00000130746	TRANSLATION	protein_coding	-	CCDS39690.1	1	670	0	0	0.5	607.8	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030237	Slco1a4	ENSMUST00000163678	ENSMUSP00000126767	TRANSLATION	protein_coding	stop	-	5	139	0	0	0	127.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030237	Slco1a4	ENSMUST00000032364	ENSMUSP00000032364	TRANSLATION	protein_coding	-	CCDS39690.1	2	670	0	0	0.5	607.8	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029883	1700074P13Rik	ENSMUST00000031935	ENSMUSP00000031935	TRANSLATION	protein_coding	-	CCDS20041.1	1	251	2	3.68	1.5	109	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029883	1700074P13Rik	ENSMUST00000122181	ENSMUSP00000112987	TRANSLATION	protein_coding	-	CCDS20041.1	1	251	2	3.68	1.5	109	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029883	1700074P13Rik	ENSMUST00000136499	ENSMUSP00000116538	TRANSLATION	protein_coding	stop	-	5	176	2	2.7	0	75	0	3,-2	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000161048	ENSMUSP00000125345	TRANSLATION	protein_coding	start/stop	-	1	405	0	3.35	0	94.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000159397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000161802	ENSMUSP00000124724	TRANSLATION	nonsense_mediated_decay	start	-	3	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000159151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000060043	ENSMUSP00000063001	TRANSLATION	protein_coding	-	CCDS20478.1	1	2377	0	6.7	0.5	280.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000045962	Wnk1	ENSMUST00000161392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045962	Wnk1	ENSMUST00000161512	ENSMUSP00000136086	TRANSLATION	protein_coding	-	-	-	433	0	0	0	0	0	1,-1	-	-	0	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000088644	ENSMUSP00000086017	TRANSLATION	protein_coding	-	CCDS57444.1	5	2635	0	6.7	0.5	280.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045962	Wnk1	ENSMUST00000203335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000162190	ENSMUSP00000125686	TRANSLATION	protein_coding	start/stop	-	5	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000159903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000160686	ENSMUSP00000137334	TRANSLATION	protein_coding	start/stop	-	3	238	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000159785	ENSMUSP00000124905	TRANSLATION	protein_coding	start/stop	-	3	252	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000160872	ENSMUSP00000123739	TRANSLATION	protein_coding	start/stop	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000035513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045962	Wnk1	ENSMUST00000177761	ENSMUSP00000136777	TRANSLATION	protein_coding	-	CCDS57445.1	5	2626	0	6.7	0.5	280.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045962	Wnk1	ENSMUST00000204207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000161243	ENSMUSP00000124050	TRANSLATION	protein_coding	start/stop	-	5	281	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000203030	ENSMUSP00000145304	TRANSLATION	protein_coding	-	CCDS85147.1	1	2128	0	6.7	0.5	280.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045962	Wnk1	ENSMUST00000162541	ENSMUSP00000125193	TRANSLATION	protein_coding	start/stop	-	3	407	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000160820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000160769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000088646	ENSMUSP00000086019	TRANSLATION	protein_coding	-	CCDS51888.1	1	2195	0	6.7	0.5	280.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045962	Wnk1	ENSMUST00000161185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045962	Wnk1	ENSMUST00000162368	ENSMUSP00000125383	TRANSLATION	protein_coding	start/stop	-	3	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045962	Wnk1	ENSMUST00000160493	ENSMUSP00000124377	TRANSLATION	protein_coding	start/stop	-	2	200	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000115668	Vmn1r25	ENSMUST00000228585	ENSMUSP00000154074	TRANSLATION	protein_coding	-	CCDS20189.1	-	302	0	0	0.5	171.5	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115668	Vmn1r25	ENSMUST00000176572	ENSMUSP00000135860	TRANSLATION	protein_coding	-	CCDS20189.1	-	302	0	0	0.5	171.5	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000004267	Eno2	ENSMUST00000127274	ENSMUSP00000145216	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0.816	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000112476	ENSMUSP00000108095	TRANSLATION	protein_coding	-	CCDS80609.1	1	315	12	7.75	1.7	508.1	0	-4,-5	-	-	5.858	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000128701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000204896	ENSMUSP00000144861	TRANSLATION	protein_coding	-	-	5	391	14	9	1.2	601.6	0	-4,-5	-	-	9.55	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000146712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000147307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000128598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004267	Eno2	ENSMUST00000135626	ENSMUSP00000114500	TRANSLATION	protein_coding	stop	-	3	121	3	2.9	0	148.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000125436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000151214	ENSMUSP00000145131	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0.816	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000004378	ENSMUSP00000004378	TRANSLATION	protein_coding	-	CCDS20527.1	1	434	14	10.25	16	720.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004267	Eno2	ENSMUST00000139763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000147004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004267	Eno2	ENSMUST00000138770	ENSMUSP00000144854	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0.816	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000149652	ENSMUSP00000119112	TRANSLATION	protein_coding	stop	-	2	162	4	4.25	0	227.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004267	Eno2	ENSMUST00000156033	ENSMUSP00000144698	TRANSLATION	protein_coding	stop	-	5	58	3	1.5	0	86.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058349	Tas2r117	ENSMUST00000068302	ENSMUSP00000069768	TRANSLATION	protein_coding	-	CCDS20623.1	-	330	0	0	0.5	280.9	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079543	Igkv13-85	ENSMUST00000114212	ENSMUSP00000109850	TRANSLATION	IG_V_gene	stop	-	-	115	0	1.1	0	57.1	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000029669	Tspan12	ENSMUST00000134635	ENSMUSP00000123475	TRANSLATION	protein_coding	stop	-	3	132	0	2.16	0	59	7	-2,-5	-	-	-1	MINOR
ENSMUSG00000029669	Tspan12	ENSMUST00000031678	ENSMUSP00000031678	TRANSLATION	protein_coding	-	CCDS19935.1	1	305	0	2.84	14.8	128.3	9	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029669	Tspan12	ENSMUST00000202353	ENSMUSP00000144671	TRANSLATION	protein_coding	stop	-	-	23	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029669	Tspan12	ENSMUST00000123116	ENSMUSP00000117820	TRANSLATION	protein_coding	stop	-	5	204	0	2.64	0	108.1	7	-2,-5	-	-	-1	MINOR
ENSMUSG00000029669	Tspan12	ENSMUST00000143531	ENSMUSP00000144717	TRANSLATION	protein_coding	stop	-	5	28	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000029669	Tspan12	ENSMUST00000120965	ENSMUSP00000113384	TRANSLATION	protein_coding	-	-	1	257	0	2.66	0	56.8	9	-2,-5	-	-	7.332	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000200969	ENSMUSP00000144244	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	0	3	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000202400	ENSMUSP00000144557	TRANSLATION	protein_coding	stop	-	3	173	0	1.014	0	36.4	9	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000202656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029924	Slc37a3	ENSMUST00000202952	ENSMUSP00000144280	TRANSLATION	protein_coding	stop	-	1	27	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000201448	ENSMUSP00000144059	TRANSLATION	nonsense_mediated_decay	-	-	2	156	0	1.014	0	0	5	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000201208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029924	Slc37a3	ENSMUST00000090243	ENSMUSP00000087709	TRANSLATION	protein_coding	-	CCDS20020.1	1	494	0	4.324	6.3	118.9	17	0,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000029924	Slc37a3	ENSMUST00000202749	ENSMUSP00000144636	TRANSLATION	protein_coding	-	-	5	83	0	0	0	0	3	0,-4	-	-	0	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000202785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029924	Slc37a3	ENSMUST00000202714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029924	Slc37a3	ENSMUST00000200961	ENSMUSP00000144562	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	1.014	0	0	5	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000200771	ENSMUSP00000143953	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	3	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000202204	ENSMUSP00000144316	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	0	3	0,-5	-	-	-1	MINOR
ENSMUSG00000029924	Slc37a3	ENSMUST00000202928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029859	Epha1	ENSMUST00000073387	ENSMUSP00000073099	TRANSLATION	protein_coding	-	CCDS20067.1	1	977	18	14	1.5	726.9	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000029859	Epha1	ENSMUST00000204238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029859	Epha1	ENSMUST00000204357	ENSMUSP00000144763	TRANSLATION	protein_coding	-	-	5	945	13	13.04	0	623.9	1	4,-1	-	-	6.744	MINOR
ENSMUSG00000095335	Igkv3-5	ENSMUST00000103400	ENSMUSP00000100201	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	71.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000067543	Prb1	ENSMUST00000087853	ENSMUSP00000085159	TRANSLATION	protein_coding	-	CCDS20614.1	1	504	0	0	0.5	216.3	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000030304	Ergic2	ENSMUST00000126773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000125469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000203268	ENSMUSP00000145204	TRANSLATION	protein_coding	start	-	2	198	0	2.66	0	128.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030304	Ergic2	ENSMUST00000203993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030304	Ergic2	ENSMUST00000132413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030304	Ergic2	ENSMUST00000134574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030304	Ergic2	ENSMUST00000130242	ENSMUSP00000122028	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030304	Ergic2	ENSMUST00000145162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030304	Ergic2	ENSMUST00000126698	ENSMUSP00000116551	TRANSLATION	protein_coding	stop	-	3	103	0	0.594	0	76.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030304	Ergic2	ENSMUST00000032446	ENSMUSP00000032446	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030304	Ergic2	ENSMUST00000143282	ENSMUSP00000145143	TRANSLATION	protein_coding	start	-	5	133	0	1.2	0	53.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030304	Ergic2	ENSMUST00000136008	ENSMUSP00000120456	TRANSLATION	protein_coding	-	CCDS20708.1	1	377	0	4.215	11.8	247.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030304	Ergic2	ENSMUST00000148437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000149631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000140311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000150980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030304	Ergic2	ENSMUST00000204832	ENSMUSP00000144886	TRANSLATION	nonsense_mediated_decay	start	-	2	49	0	0.6	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000203783	ENSMUSP00000145324	TRANSLATION	protein_coding	start	-	5	128	0	3.184	0	134.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000019354	ENSMUSP00000019354	TRANSLATION	protein_coding	-	CCDS20484.1	1	226	0	4.732	19.5	260.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000205049	ENSMUSP00000145353	TRANSLATION	protein_coding	stop	-	3	87	0	1.848	0	93.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000203432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000203527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019210	Atp6v1e1	ENSMUST00000204699	ENSMUSP00000145437	TRANSLATION	protein_coding	stop	-	3	78	0	1.85	0	101.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030284	Creld1	ENSMUST00000147932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030284	Creld1	ENSMUST00000135852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030284	Creld1	ENSMUST00000156764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030284	Creld1	ENSMUST00000129125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030284	Creld1	ENSMUST00000032422	ENSMUSP00000032422	TRANSLATION	protein_coding	-	CCDS20423.1	1	420	12	0.75	7.5	92.9	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000030284	Creld1	ENSMUST00000204920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001518	Itfg2	ENSMUST00000203374	ENSMUSP00000145323	TRANSLATION	protein_coding	-	-	5	411	7	0	0	491.2	0	-4,-7	-	-	9.774	MINOR
ENSMUSG00000001518	Itfg2	ENSMUST00000203195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001518	Itfg2	ENSMUST00000203853	ENSMUSP00000145282	TRANSLATION	nonsense_mediated_decay	-	-	5	87	4	0	0	39.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001518	Itfg2	ENSMUST00000142615	ENSMUSP00000145111	TRANSLATION	protein_coding	-	-	1	358	8	0	0	453.4	0	-4,-7	-	-	8.256	MINOR
ENSMUSG00000001518	Itfg2	ENSMUST00000133994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001518	Itfg2	ENSMUST00000001559	ENSMUSP00000001559	TRANSLATION	protein_coding	-	CCDS20572.1	1	443	8	0	5.1	515.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000001518	Itfg2	ENSMUST00000204362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001518	Itfg2	ENSMUST00000203984	ENSMUSP00000144837	TRANSLATION	protein_coding	start	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001518	Itfg2	ENSMUST00000204467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001518	Itfg2	ENSMUST00000203026	ENSMUSP00000145388	TRANSLATION	nonsense_mediated_decay	-	-	3	136	4	0	0	101.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009145	Dqx1	ENSMUST00000204803	ENSMUSP00000144697	TRANSLATION	non_stop_decay	stop	-	5	324	12	2.52	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009145	Dqx1	ENSMUST00000077502	ENSMUSP00000076708	TRANSLATION	protein_coding	-	CCDS20268.1	5	718	12	7.9	1.5	101.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030173	Klra5	ENSMUST00000169901	ENSMUSP00000126290	TRANSLATION	protein_coding	-	-	1	176	3	4	0	150.7	0	-4,-5	-	-	7.986	MINOR
ENSMUSG00000030173	Klra5	ENSMUST00000167079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030173	Klra5	ENSMUST00000014683	ENSMUSP00000014683	TRANSLATION	protein_coding	-	CCDS20596.1	1	266	3	4.8	0.5	240.9	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030173	Klra5	ENSMUST00000118060	ENSMUSP00000112795	TRANSLATION	protein_coding	-	CCDS20596.1	5	266	3	4.8	0.5	240.9	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031865	Dctn1	ENSMUST00000127824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031865	Dctn1	ENSMUST00000154420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031865	Dctn1	ENSMUST00000077407	ENSMUSP00000076623	TRANSLATION	protein_coding	-	CCDS57433.1	1	1239	0	4.75	5.3	422	0	-4,-2	-	-	12.666	MINOR
ENSMUSG00000031865	Dctn1	ENSMUST00000113907	ENSMUSP00000109540	TRANSLATION	protein_coding	-	-	5	1142	0	3	6.5	338.6	0	-4,-2	-	-	4.716	MINOR
ENSMUSG00000031865	Dctn1	ENSMUST00000141680	ENSMUSP00000121538	TRANSLATION	protein_coding	stop	-	5	159	0	1.75	0	83.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031865	Dctn1	ENSMUST00000113913	ENSMUSP00000109546	TRANSLATION	protein_coding	-	CCDS57432.1	1	1264	0	4.75	5.3	422	0	-4,-2	-	-	12.666	MINOR
ENSMUSG00000031865	Dctn1	ENSMUST00000113919	ENSMUSP00000109552	TRANSLATION	protein_coding	-	CCDS39532.1	1	1281	0	5.41	7.5	422	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000031865	Dctn1	ENSMUST00000130917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031865	Dctn1	ENSMUST00000123313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031865	Dctn1	ENSMUST00000113918	ENSMUSP00000109551	TRANSLATION	protein_coding	-	-	5	1243	0	5.41	0	422	0	-4,0	-	-	12	MINOR
ENSMUSG00000031865	Dctn1	ENSMUST00000153793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031865	Dctn1	ENSMUST00000130212	ENSMUSP00000115838	TRANSLATION	protein_coding	stop	-	3	189	0	1.75	0	83.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001424	Snd1	ENSMUST00000163772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000164915	ENSMUSP00000127317	TRANSLATION	nonsense_mediated_decay	-	-	1	262	0	2.93	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001424	Snd1	ENSMUST00000166136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000169321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000171532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000171195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000165151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001424	Snd1	ENSMUST00000168362	ENSMUSP00000126382	TRANSLATION	protein_coding	stop	-	5	10	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001424	Snd1	ENSMUST00000169579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001424	Snd1	ENSMUST00000183161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001424	Snd1	ENSMUST00000167201	ENSMUSP00000128737	TRANSLATION	protein_coding	-	-	1	608	0	15.72	0.5	147.7	0	-4,-2	-	-	0	MINOR
ENSMUSG00000001424	Snd1	ENSMUST00000001460	ENSMUSP00000001460	TRANSLATION	protein_coding	-	CCDS19953.1	1	910	0	22.51	2.7	322	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063694	Cycs	ENSMUST00000161401	ENSMUSP00000124523	TRANSLATION	protein_coding	-	CCDS20131.1	1	105	27	2	21.5	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063694	Cycs	ENSMUST00000077766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030127	Cops7a	ENSMUST00000135645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030127	Cops7a	ENSMUST00000112439	ENSMUSP00000108058	TRANSLATION	protein_coding	-	CCDS51909.1	1	277	0	5	1.5	26	0	-4,-6	-	-	12.168	MINOR
ENSMUSG00000030127	Cops7a	ENSMUST00000129446	ENSMUSP00000114420	TRANSLATION	protein_coding	stop	-	3	176	0	3.5	0	26	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030127	Cops7a	ENSMUST00000129976	ENSMUSP00000117584	TRANSLATION	protein_coding	stop	-	5	226	0	5	0	26	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030127	Cops7a	ENSMUST00000032220	ENSMUSP00000032220	TRANSLATION	protein_coding	-	CCDS20539.1	1	275	0	5	12.8	26	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000030127	Cops7a	ENSMUST00000148485	ENSMUSP00000115348	TRANSLATION	protein_coding	stop	-	3	79	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030127	Cops7a	ENSMUST00000149346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049939	Lrrc4	ENSMUST00000171353	ENSMUSP00000129497	TRANSLATION	protein_coding	-	-	3	177	0	0.2	0	0	1	-4,-5	-	-	1.002	MINOR
ENSMUSG00000049939	Lrrc4	ENSMUST00000062304	ENSMUSP00000062158	TRANSLATION	protein_coding	-	CCDS39448.1	-	652	2	1.2	6.3	159.9	2	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000076501	Igkv2-137	ENSMUST00000103302	ENSMUSP00000100103	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	58.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030017	Reg3g	ENSMUST00000032089	ENSMUSP00000032089	TRANSLATION	protein_coding	-	CCDS20258.1	1	174	3	4.11	1.5	78.4	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000030017	Reg3g	ENSMUST00000176650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056197	4931417E11Rik	ENSMUST00000204006	-	NO_TRANSLATION	transcribed_processed_pseudogene
ENSMUSG00000056197	4931417E11Rik	ENSMUST00000070163	ENSMUSP00000068770	TRANSLATION	protein_coding	-	CCDS39520.1	-	305	0	0	1.5	366.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000056197	4931417E11Rik	ENSMUST00000205241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076496	Trbj2-5	ENSMUST00000103297	ENSMUSP00000141297	TRANSLATION	TR_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040552	C3ar1	ENSMUST00000042081	ENSMUSP00000048092	TRANSLATION	protein_coding	-	CCDS20504.1	1	477	0	0.2	0.5	140.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034387	Ssu2	ENSMUST00000238755	ENSMUSP00000158856	TRANSLATION	protein_coding	-	-	-	375	12	0	5.1	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000034387	Ssu2	ENSMUST00000143134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034387	Ssu2	ENSMUST00000060847	ENSMUSP00000052328	TRANSLATION	protein_coding	-	CCDS20405.1	1	340	12	0	0.5	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000034387	Ssu2	ENSMUST00000123254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051896	Tex37	ENSMUST00000063456	ENSMUSP00000066786	TRANSLATION	protein_coding	-	CCDS20224.1	1	180	0	0	5.1	344	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000046652	Tas2r143	ENSMUST00000057398	ENSMUSP00000057910	TRANSLATION	protein_coding	-	CCDS20068.1	-	293	0	0	1.5	222.6	0	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000047228	A2ml1	ENSMUST00000205167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047228	A2ml1	ENSMUST00000203129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047228	A2ml1	ENSMUST00000203889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047228	A2ml1	ENSMUST00000203291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047228	A2ml1	ENSMUST00000060574	ENSMUSP00000059426	TRANSLATION	protein_coding	-	CCDS39651.1	1	1456	2	23.46	0.5	580.7	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000029830	Svopl	ENSMUST00000040486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029830	Svopl	ENSMUST00000172585	ENSMUSP00000133326	TRANSLATION	nonsense_mediated_decay	start	-	5	29	0	0	0	0	0	-1,-6	-	-	-1	MINOR
ENSMUSG00000029830	Svopl	ENSMUST00000200796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029830	Svopl	ENSMUST00000173428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029830	Svopl	ENSMUST00000096040	ENSMUSP00000093743	TRANSLATION	protein_coding	-	CCDS20009.2	1	494	0	5.875	4.1	68.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000029755	Dlx5	ENSMUST00000204014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029755	Dlx5	ENSMUST00000052609	ENSMUSP00000052559	TRANSLATION	protein_coding	-	CCDS19905.1	1	289	0	2.08	9.5	162.4	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000029755	Dlx5	ENSMUST00000142635	ENSMUSP00000138264	TRANSLATION	protein_coding	-	CCDS59691.1	1	146	0	0	1.5	91.1	0	-4,-2	-	-	1.899	MINOR
ENSMUSG00000034968	Lbx2	ENSMUST00000041265	ENSMUSP00000047134	TRANSLATION	protein_coding	-	CCDS20271.1	1	195	0	0.6	1.5	68.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034968	Lbx2	ENSMUST00000151508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039130	Zc3hc1	ENSMUST00000202393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039130	Zc3hc1	ENSMUST00000102992	ENSMUSP00000100057	TRANSLATION	protein_coding	-	CCDS19970.1	1	481	0	0	0.5	162.2	0	-4,-5	-	-	5.334	MINOR
ENSMUSG00000039130	Zc3hc1	ENSMUST00000147990	ENSMUSP00000116484	TRANSLATION	nonsense_mediated_decay	start	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039130	Zc3hc1	ENSMUST00000115184	ENSMUSP00000110838	TRANSLATION	protein_coding	-	-	5	430	0	0	1.2	173.3	0	-4,-5	-	-	6.076	MINOR
ENSMUSG00000039130	Zc3hc1	ENSMUST00000129796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039130	Zc3hc1	ENSMUST00000136255	ENSMUSP00000115433	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039130	Zc3hc1	ENSMUST00000080812	ENSMUSP00000079627	TRANSLATION	protein_coding	-	CCDS80508.1	1	501	0	0	6.3	162.2	0	-4,-5	-	-	7.334	PRINCIPAL:1
ENSMUSG00000039130	Zc3hc1	ENSMUST00000126945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039130	Zc3hc1	ENSMUST00000152391	ENSMUSP00000135447	TRANSLATION	protein_coding	-	-	5	459	0	0	1.2	121.1	0	-4,-5	-	-	2.944	MINOR
ENSMUSG00000039130	Zc3hc1	ENSMUST00000152101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039130	Zc3hc1	ENSMUST00000138983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061977	Tas2r104	ENSMUST00000072404	ENSMUSP00000072237	TRANSLATION	protein_coding	-	CCDS20611.1	-	302	0	0	1.5	333.9	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000000058	Cav2	ENSMUST00000115462	ENSMUSP00000111122	TRANSLATION	protein_coding	-	-	5	117	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000000058	Cav2	ENSMUST00000000058	ENSMUSP00000000058	TRANSLATION	protein_coding	-	CCDS19923.1	1	162	0	0	8.8	188.7	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000000058	Cav2	ENSMUST00000115459	ENSMUSP00000111119	TRANSLATION	protein_coding	-	CCDS71727.1	1	113	0	0	0.5	129	1	-4,-5	-	-	2.418	MINOR
ENSMUSG00000076562	Igkv4-50	ENSMUST00000103363	ENSMUSP00000100164	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	62.1	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000034430	Zxdc	ENSMUST00000203493	ENSMUSP00000144992	TRANSLATION	protein_coding	start	-	1	152	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000034430	Zxdc	ENSMUST00000113539	ENSMUSP00000109167	TRANSLATION	protein_coding	-	CCDS51848.1	1	712	39	3.23	0.5	119.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034430	Zxdc	ENSMUST00000137483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034430	Zxdc	ENSMUST00000045740	ENSMUSP00000036329	TRANSLATION	protein_coding	-	-	1	512	39	3.23	0	119.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034430	Zxdc	ENSMUST00000075117	ENSMUSP00000074619	TRANSLATION	protein_coding	-	CCDS20358.1	1	858	39	3.23	0.5	119.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000094569	Trbd2	ENSMUST00000178862	ENSMUSP00000141312	TRANSLATION	TR_D_gene	start/stop	-	-	4	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030324	Rho	ENSMUST00000203284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030324	Rho	ENSMUST00000203323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030324	Rho	ENSMUST00000032471	ENSMUSP00000032471	TRANSLATION	protein_coding	-	CCDS20446.1	1	348	19	7.08	11.3	238.7	9	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000030324	Rho	ENSMUST00000204711	ENSMUSP00000144768	TRANSLATION	protein_coding	stop	-	3	203	14	5.33	0	85.1	6	-1,-4	-	-	-1	MINOR
ENSMUSG00000030324	Rho	ENSMUST00000203877	ENSMUSP00000144952	TRANSLATION	protein_coding	-	-	2	189	13	4.43	0	63.5	4	-4,-2	-	-	2.7	MINOR
ENSMUSG00000030324	Rho	ENSMUST00000203531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030324	Rho	ENSMUST00000204493	ENSMUSP00000145464	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0.1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000053004	Hrh1	ENSMUST00000161220	ENSMUSP00000124037	TRANSLATION	protein_coding	-	CCDS20435.1	1	488	0	1.5	1.5	229.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053004	Hrh1	ENSMUST00000161650	ENSMUSP00000124460	TRANSLATION	protein_coding	-	CCDS20435.1	1	488	0	1.5	1.5	229.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053004	Hrh1	ENSMUST00000160780	ENSMUSP00000124320	TRANSLATION	protein_coding	-	CCDS20435.1	5	488	0	1.5	1.5	229.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053004	Hrh1	ENSMUST00000160212	ENSMUSP00000125316	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053004	Hrh1	ENSMUST00000088987	ENSMUSP00000086383	TRANSLATION	protein_coding	-	CCDS20435.1	1	488	0	1.5	1.5	229.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029836	Cbx3	ENSMUST00000114445	ENSMUSP00000110088	TRANSLATION	protein_coding	-	-	5	71	0	1	0	26.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000029836	Cbx3	ENSMUST00000156463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029836	Cbx3	ENSMUST00000094623	ENSMUSP00000110091	TRANSLATION	protein_coding	-	CCDS20135.1	1	183	1	4	14.8	162	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029836	Cbx3	ENSMUST00000031862	ENSMUSP00000031862	TRANSLATION	protein_coding	-	CCDS20135.1	1	183	1	4	14.8	162	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029836	Cbx3	ENSMUST00000114446	ENSMUSP00000110089	TRANSLATION	protein_coding	-	CCDS20135.1	5	183	1	4	14.8	162	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029836	Cbx3	ENSMUST00000203404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029836	Cbx3	ENSMUST00000153699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029836	Cbx3	ENSMUST00000141711	ENSMUSP00000121370	TRANSLATION	protein_coding	stop	-	5	110	1	2	0	61	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030082	Sec61a1	ENSMUST00000032168	ENSMUSP00000032168	TRANSLATION	protein_coding	-	CCDS39553.1	1	476	0	10	19.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000030082	Sec61a1	ENSMUST00000203943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000125016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000139676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000155079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030082	Sec61a1	ENSMUST00000204502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000203200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030082	Sec61a1	ENSMUST00000139551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030082	Sec61a1	ENSMUST00000130807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000145421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000130918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030082	Sec61a1	ENSMUST00000136103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020440	Arf5	ENSMUST00000202028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020440	Arf5	ENSMUST00000020717	ENSMUSP00000020717	TRANSLATION	protein_coding	-	CCDS19952.1	1	180	19	5	19.5	255.1	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000020440	Arf5	ENSMUST00000169841	ENSMUSP00000127281	TRANSLATION	protein_coding	-	CCDS19952.1	5	180	19	5	19.5	255.1	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000030138	Bms1	ENSMUST00000032237	ENSMUSP00000032237	TRANSLATION	protein_coding	-	CCDS20471.1	1	1284	15	7.385	0.5	421.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030138	Bms1	ENSMUST00000205207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030138	Bms1	ENSMUST00000203444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071158	Klrh1	ENSMUST00000095409	ENSMUSP00000093058	TRANSLATION	protein_coding	-	CCDS20595.1	1	223	4	2.42	0.5	59.3	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000071158	Klrh1	ENSMUST00000118532	ENSMUSP00000113766	TRANSLATION	protein_coding	-	-	1	180	3	1.82	0.5	41.4	1	-4,-5	-	-	11.7	MINOR
ENSMUSG00000030281	Il17rc	ENSMUST00000204632	ENSMUSP00000145348	TRANSLATION	protein_coding	start/stop	-	3	62	0	0	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030281	Il17rc	ENSMUST00000205208	ENSMUSP00000145038	TRANSLATION	protein_coding	start	-	1	579	0	0.48	0	588.3	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030281	Il17rc	ENSMUST00000204447	ENSMUSP00000145420	TRANSLATION	protein_coding	start/stop	-	3	142	0	0	0	147.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030281	Il17rc	ENSMUST00000203668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030281	Il17rc	ENSMUST00000058300	ENSMUSP00000055343	TRANSLATION	protein_coding	-	CCDS20422.1	1	674	0	0.48	0.5	580.9	1	-1,-4	-	-	11.556	PRINCIPAL:1
ENSMUSG00000095737	Igkv11-125	ENSMUST00000103311	ENSMUSP00000100112	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	55.2	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095737	Igkv11-125	ENSMUST00000197406	ENSMUSP00000142805	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	55.2	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000030093	Wnt7a	ENSMUST00000132936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030093	Wnt7a	ENSMUST00000032180	ENSMUSP00000032180	TRANSLATION	protein_coding	-	CCDS39568.1	1	349	0	2.04	16	408.2	0	-2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000030093	Wnt7a	ENSMUST00000133092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029798	Herc6	ENSMUST00000204843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029798	Herc6	ENSMUST00000204455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029798	Herc6	ENSMUST00000031817	ENSMUSP00000031817	TRANSLATION	protein_coding	-	CCDS51796.1	1	1003	0	10.575	0.5	436.1	0	-3,0	-	-	12	PRINCIPAL:1
ENSMUSG00000029798	Herc6	ENSMUST00000203506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029798	Herc6	ENSMUST00000204166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029798	Herc6	ENSMUST00000203840	ENSMUSP00000145505	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	0.6	0	24.9	0	-3,0	-	-	-1	MINOR
ENSMUSG00000048794	Cfap100	ENSMUST00000127508	ENSMUSP00000145109	TRANSLATION	protein_coding	-	-	2	72	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000048794	Cfap100	ENSMUST00000153843	ENSMUSP00000144969	TRANSLATION	nonsense_mediated_decay	-	-	2	47	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000048794	Cfap100	ENSMUST00000135757	ENSMUSP00000144829	TRANSLATION	protein_coding	-	-	5	39	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000048794	Cfap100	ENSMUST00000165673	ENSMUSP00000126515	TRANSLATION	protein_coding	-	CCDS51849.1	5	613	0	0	0.5	114.3	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000048794	Cfap100	ENSMUST00000134224	ENSMUSP00000145247	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000048794	Cfap100	ENSMUST00000062750	ENSMUSP00000059976	TRANSLATION	protein_coding	-	-	1	459	0	0	0.5	113.9	0	-4,-7	-	-	5.976	ALTERNATIVE:2
ENSMUSG00000048794	Cfap100	ENSMUST00000128124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029923	Rab19	ENSMUST00000031986	ENSMUSP00000031986	TRANSLATION	protein_coding	-	CCDS20021.1	1	217	21	2.8	7.6	183	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000064177	Ghrl	ENSMUST00000203770	ENSMUSP00000145281	TRANSLATION	protein_coding	-	CCDS20432.1	1	117	0	0	6.3	161.9	0	3,-2	-	-	8	PRINCIPAL:3
ENSMUSG00000064177	Ghrl	ENSMUST00000204163	ENSMUSP00000145096	TRANSLATION	protein_coding	-	CCDS85127.1	1	116	0	0	6.3	157.4	0	3,-2	-	-	7.73	ALTERNATIVE:1
ENSMUSG00000064177	Ghrl	ENSMUST00000203363	ENSMUSP00000145366	TRANSLATION	protein_coding	-	CCDS85128.1	1	86	0	0	0.5	46.9	0	3,-2	-	-	0	MINOR
ENSMUSG00000064177	Ghrl	ENSMUST00000204191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064177	Ghrl	ENSMUST00000204533	ENSMUSP00000145046	TRANSLATION	protein_coding	-	-	2	54	0	0	0.5	87.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000064177	Ghrl	ENSMUST00000064993	ENSMUSP00000069567	TRANSLATION	protein_coding	-	CCDS20432.1	1	117	0	0	6.3	161.9	0	3,-2	-	-	8	PRINCIPAL:3
ENSMUSG00000064177	Ghrl	ENSMUST00000203588	ENSMUSP00000145514	TRANSLATION	protein_coding	-	CCDS85126.1	1	78	0	0	0.5	86.1	0	3,-2	-	-	1.452	MINOR
ENSMUSG00000107928	Gm45140	ENSMUST00000204169	ENSMUSP00000145334	TRANSLATION	protein_coding,RT	start	-	3	118	0	0	0	0	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000107928	Gm45140	ENSMUST00000204419	ENSMUSP00000144743	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	220	0	3.05	0	283.1	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000042810	Krba1	ENSMUST00000154536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042810	Krba1	ENSMUST00000114571	ENSMUSP00000110218	TRANSLATION	protein_coding	-	CCDS20102.1	1	1043	0	0.5	0.5	220.4	0	-4,-6	-	-	4.128	MINOR
ENSMUSG00000042810	Krba1	ENSMUST00000204308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042810	Krba1	ENSMUST00000204554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042810	Krba1	ENSMUST00000148697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042810	Krba1	ENSMUST00000114572	ENSMUSP00000110219	TRANSLATION	protein_coding	-	CCDS85037.1	1	1078	0	1.3	0.5	290.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042810	Krba1	ENSMUST00000077093	ENSMUSP00000076345	TRANSLATION	protein_coding	-	CCDS20102.1	1	1043	0	0.5	0.5	220.4	0	-4,-6	-	-	4.128	MINOR
ENSMUSG00000042810	Krba1	ENSMUST00000127980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042810	Krba1	ENSMUST00000031815	ENSMUSP00000031815	TRANSLATION	protein_coding	-	-	1	1032	0	0	0.5	214.8	0	-4,-2	-	-	1.482	MINOR
ENSMUSG00000042810	Krba1	ENSMUST00000203371	ENSMUSP00000145256	TRANSLATION	protein_coding	-	CCDS85038.1	1	1042	0	0.5	0.5	220.4	0	-4,-6	-	-	4.128	MINOR
ENSMUSG00000023089	Ndufa5	ENSMUST00000141274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023089	Ndufa5	ENSMUST00000023851	ENSMUSP00000023851	TRANSLATION	protein_coding	-	CCDS19942.1	1	116	0	3.58	9.5	90	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000023089	Ndufa5	ENSMUST00000118558	ENSMUSP00000112971	TRANSLATION	protein_coding	-	CCDS80494.1	2	77	0	2.58	5.3	0	0	-4,-7	-	-	5.52	MINOR
ENSMUSG00000023089	Ndufa5	ENSMUST00000132588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076499	Trbv31	ENSMUST00000193003	ENSMUSP00000141434	TRANSLATION	TR_V_gene	stop	-	-	111	0	1.1	0	28.2	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076499	Trbv31	ENSMUST00000103300	ENSMUSP00000100101	TRANSLATION	TR_V_gene	stop	-	-	111	0	1.1	0	28.2	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000001632	Brpf1	ENSMUST00000204198	ENSMUSP00000144804	TRANSLATION	protein_coding	-	-	5	1118	18	6	4.1	437.7	0	-4,-5	-	-	19.512	ALTERNATIVE:2
ENSMUSG00000001632	Brpf1	ENSMUST00000204626	ENSMUSP00000145093	TRANSLATION	protein_coding	-	CCDS85115.1	1	1218	18	5.835	4.1	431.2	0	-4,-5	-	-	18.792	MINOR
ENSMUSG00000001632	Brpf1	ENSMUST00000113122	ENSMUSP00000108747	TRANSLATION	protein_coding	-	CCDS71810.1	5	1212	18	6	4.1	437.7	0	-4,-5	-	-	19.512	ALTERNATIVE:2
ENSMUSG00000001632	Brpf1	ENSMUST00000113117	ENSMUSP00000108742	TRANSLATION	protein_coding	-	CCDS39592.1	1	1246	18	6	5.1	437.7	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000001632	Brpf1	ENSMUST00000131594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001632	Brpf1	ENSMUST00000138737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001632	Brpf1	ENSMUST00000113121	ENSMUSP00000108746	TRANSLATION	protein_coding	-	-	5	1219	18	5.835	4.1	431.2	0	-4,-5	-	-	18.792	MINOR
ENSMUSG00000001632	Brpf1	ENSMUST00000203577	ENSMUSP00000144820	TRANSLATION	protein_coding	-	-	5	1252	18	5.835	3.9	431.2	0	-4,-5	-	-	18.694	MINOR
ENSMUSG00000001632	Brpf1	ENSMUST00000124530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001632	Brpf1	ENSMUST00000113119	ENSMUSP00000108744	TRANSLATION	protein_coding	-	CCDS71809.1	1	1247	18	6	5.1	437.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000073155	1810058I24Rik	ENSMUST00000130875	ENSMUSP00000159124	TRANSLATION	protein_coding	-	-	1	32	0	0	0	45.2	0	-4,-5	-	-	3.864	MINOR
ENSMUSG00000073155	1810058I24Rik	ENSMUST00000152147	ENSMUSP00000158958	TRANSLATION	protein_coding	-	-	1	47	0	0	19	70.2	0	-3,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000073155	1810058I24Rik	ENSMUST00000136110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030199	Etv6	ENSMUST00000169529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030199	Etv6	ENSMUST00000111963	ENSMUSP00000107594	TRANSLATION	protein_coding	-	-	1	396	0	4.55	0	137.7	0	-4,-6	-	-	5.442	MINOR
ENSMUSG00000030199	Etv6	ENSMUST00000081028	ENSMUSP00000079818	TRANSLATION	protein_coding	-	CCDS39677.1	2	485	0	5.95	0.5	200.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030199	Etv6	ENSMUST00000145869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030199	Etv6	ENSMUST00000164648	ENSMUSP00000130761	TRANSLATION	protein_coding	stop	-	5	158	0	2.95	0	96.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000115467	Vmn1r37	ENSMUST00000227923	ENSMUSP00000154109	TRANSLATION	protein_coding	-	CCDS20215.1	-	302	0	0	1.5	180.4	9	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115467	Vmn1r37	ENSMUST00000226886	ENSMUSP00000154597	TRANSLATION	protein_coding	-	-	-	135	0	0	0	88.8	5	-4,-5	-	-	0.504	MINOR
ENSMUSG00000115467	Vmn1r37	ENSMUST00000226974	ENSMUSP00000154344	TRANSLATION	protein_coding	-	CCDS20215.1	-	302	0	0	1.5	180.4	9	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115467	Vmn1r37	ENSMUST00000226311	ENSMUSP00000154249	TRANSLATION	protein_coding	-	-	-	135	0	0	0	88.8	5	-4,-5	-	-	0.504	MINOR
ENSMUSG00000115467	Vmn1r37	ENSMUST00000077482	ENSMUSP00000076691	TRANSLATION	protein_coding	-	CCDS20215.1	-	302	0	0	1.5	180.4	9	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115467	Vmn1r37	ENSMUST00000228791	ENSMUSP00000153814	TRANSLATION	protein_coding	-	-	-	265	0	0	0	175.4	8	0,-4	-	-	5.7	MINOR
ENSMUSG00000045896	Paip2b	ENSMUST00000125493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045896	Paip2b	ENSMUST00000142806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045896	Paip2b	ENSMUST00000058383	ENSMUSP00000050404	TRANSLATION	protein_coding	-	CCDS20287.1	1	136	0	0	1.5	28.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045896	Paip2b	ENSMUST00000145593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045896	Paip2b	ENSMUST00000205421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038538	Ubn2	ENSMUST00000161280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038538	Ubn2	ENSMUST00000162423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038538	Ubn2	ENSMUST00000162026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038538	Ubn2	ENSMUST00000160583	ENSMUSP00000124043	TRANSLATION	protein_coding	-	CCDS39461.1	1	1314	0	0	1.5	337.4	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000038538	Ubn2	ENSMUST00000159447	ENSMUSP00000123836	TRANSLATION	protein_coding	start	-	1	322	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038538	Ubn2	ENSMUST00000159925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038538	Ubn2	ENSMUST00000162593	ENSMUSP00000124352	TRANSLATION	protein_coding	start	-	1	1043	0	0	0	337.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038538	Ubn2	ENSMUST00000159215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038538	Ubn2	ENSMUST00000039127	ENSMUSP00000036188	TRANSLATION	protein_coding	-	-	1	1316	0	0	1.5	330.7	0	-4,-2	-	-	5.598	ALTERNATIVE:2
ENSMUSG00000030249	Abcc9	ENSMUST00000205202	ENSMUSP00000144779	TRANSLATION	protein_coding	-	CCDS39697.1	5	1511	25	32.05	0.5	412.3	28	-4,-7	-	-	16.878	MINOR
ENSMUSG00000030249	Abcc9	ENSMUST00000073173	ENSMUSP00000072914	TRANSLATION	protein_coding	-	CCDS39697.1	5	1511	25	32.05	0.5	412.3	28	-4,-7	-	-	16.878	MINOR
ENSMUSG00000030249	Abcc9	ENSMUST00000100827	ENSMUSP00000098390	TRANSLATION	protein_coding	-	CCDS39696.1	1	1546	25	32.61	1.5	412.3	28	-4,-7	-	-	18	PRINCIPAL:5
ENSMUSG00000030249	Abcc9	ENSMUST00000204870	ENSMUSP00000145489	TRANSLATION	protein_coding	-	-	2	159	0	2.8	0	0	4	-4,-7	-	-	0	MINOR
ENSMUSG00000030249	Abcc9	ENSMUST00000111771	ENSMUSP00000107401	TRANSLATION	protein_coding	-	-	5	1533	25	32.11	0.5	404.9	28	-4,-7	-	-	16.554	MINOR
ENSMUSG00000030249	Abcc9	ENSMUST00000087527	ENSMUSP00000084805	TRANSLATION	protein_coding	-	CCDS39699.1	1	1546	25	32.41	1.5	412.3	28	-4,-7	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000038648	Creb3l2	ENSMUST00000041093	ENSMUSP00000040208	TRANSLATION	protein_coding	-	CCDS20006.1	1	521	0	0.55	7.5	52.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038648	Creb3l2	ENSMUST00000128534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079494	Nat8f5	ENSMUST00000032074	ENSMUSP00000032074	TRANSLATION	protein_coding	-	CCDS20300.1	1	227	21	0.28	1.5	57.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000072718	Klra10	ENSMUST00000112020	ENSMUSP00000107651	TRANSLATION	protein_coding	-	CCDS20600.1	1	266	3	4.2	0.5	227.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000029735	Tpk1	ENSMUST00000149424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029735	Tpk1	ENSMUST00000150599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029735	Tpk1	ENSMUST00000114644	ENSMUSP00000110291	TRANSLATION	protein_coding	-	CCDS80529.1	1	194	22	5.75	2.9	183	0	-4,-5	-	-	13.692	MINOR
ENSMUSG00000029735	Tpk1	ENSMUST00000067888	ENSMUSP00000065631	TRANSLATION	protein_coding	-	CCDS39474.1	1	243	23	6.75	10.8	220.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000029735	Tpk1	ENSMUST00000114643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029735	Tpk1	ENSMUST00000203649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046178	Nxph1	ENSMUST00000162942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046178	Nxph1	ENSMUST00000060369	ENSMUSP00000060926	TRANSLATION	protein_coding	-	CCDS39426.1	1	271	0	0	17	375.1	0	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000046178	Nxph1	ENSMUST00000160300	ENSMUSP00000125274	TRANSLATION	protein_coding	-	CCDS39426.1	1	271	0	0	17	375.1	0	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000093861	Igkv1-110	ENSMUST00000103321	ENSMUSP00000100122	TRANSLATION	IG_V_gene	stop	-	-	119	5	1.5	0	63.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000029916	Agk	ENSMUST00000201751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029916	Agk	ENSMUST00000202856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029916	Agk	ENSMUST00000201033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029916	Agk	ENSMUST00000201342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029916	Agk	ENSMUST00000202949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029916	Agk	ENSMUST00000031977	ENSMUSP00000031977	TRANSLATION	protein_coding	-	CCDS20027.1	1	421	10	4.02	7.5	88.5	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000029916	Agk	ENSMUST00000201329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029916	Agk	ENSMUST00000200715	ENSMUSP00000143971	TRANSLATION	nonsense_mediated_decay	-	-	5	78	1	0.45	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000030323	Ift122	ENSMUST00000038234	ENSMUSP00000045468	TRANSLATION	protein_coding	-	CCDS20445.1	1	1183	0	4.86	8.4	44.2	0	-4,-5	-	-	14.598	PRINCIPAL:3
ENSMUSG00000030323	Ift122	ENSMUST00000152092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030323	Ift122	ENSMUST00000141305	ENSMUSP00000138535	TRANSLATION	nonsense_mediated_decay	-	-	1	209	0	3.64	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030323	Ift122	ENSMUST00000138113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030323	Ift122	ENSMUST00000112923	ENSMUSP00000108545	TRANSLATION	protein_coding	-	-	5	1241	0	5.06	5.2	44.2	0	-4,-5	-	-	13.704	ALTERNATIVE:1
ENSMUSG00000030323	Ift122	ENSMUST00000149083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030323	Ift122	ENSMUST00000112925	ENSMUSP00000108547	TRANSLATION	protein_coding	-	CCDS51880.1	1	1182	0	4.86	8.4	44.2	0	-4,-5	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000030323	Ift122	ENSMUST00000146950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030323	Ift122	ENSMUST00000124283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030323	Ift122	ENSMUST00000125889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030323	Ift122	ENSMUST00000203243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030323	Ift122	ENSMUST00000155565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030101	Sumf1	ENSMUST00000032191	ENSMUSP00000032191	TRANSLATION	protein_coding	-	CCDS51868.1	1	372	12	7.45	2.7	302.4	0	1,-2	-	-	17.856	PRINCIPAL:1
ENSMUSG00000030101	Sumf1	ENSMUST00000169446	ENSMUSP00000130061	TRANSLATION	protein_coding	start	-	3	151	7	1.75	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030101	Sumf1	ENSMUST00000167338	ENSMUSP00000127537	TRANSLATION	protein_coding	-	-	5	347	12	6.7	0	304.8	0	1,-2	-	-	16.5	MINOR
ENSMUSG00000030101	Sumf1	ENSMUST00000172188	ENSMUSP00000132321	TRANSLATION	protein_coding	-	-	5	240	8	3.95	0	96.3	0	1,-2	-	-	3.336	MINOR
ENSMUSG00000030101	Sumf1	ENSMUST00000171697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030101	Sumf1	ENSMUST00000166197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030058	Copg1	ENSMUST00000137717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030058	Copg1	ENSMUST00000203240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030058	Copg1	ENSMUST00000113607	ENSMUSP00000109237	TRANSLATION	protein_coding	-	CCDS39549.1	1	874	0	21	12.8	787.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030058	Copg1	ENSMUST00000152175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030058	Copg1	ENSMUST00000049966	ENSMUSP00000050858	TRANSLATION	protein_coding	-	CCDS39550.1	1	121	0	3.25	0.5	59.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030058	Copg1	ENSMUST00000132938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030058	Copg1	ENSMUST00000127614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030058	Copg1	ENSMUST00000205234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030058	Copg1	ENSMUST00000149907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030058	Copg1	ENSMUST00000149409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073028	Igkv4-71	ENSMUST00000196201	ENSMUSP00000142768	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	57.5	0	-1,-4	-	-	-1	PRINCIPAL:5
ENSMUSG00000073028	Igkv4-71	ENSMUST00000101325	ENSMUSP00000100575	TRANSLATION	protein_coding	start/stop	-	-	96	2	1	0	57.5	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000029684	Wasl	ENSMUST00000173399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029684	Wasl	ENSMUST00000031695	ENSMUSP00000031695	TRANSLATION	protein_coding	-	CCDS19945.1	1	501	0	7.58	1.5	266.4	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000029684	Wasl	ENSMUST00000041737	ENSMUSP00000043968	TRANSLATION	protein_coding	-	CCDS51727.1	1	193	0	3.55	0.5	140.3	0	-4,-1	-	-	0	MINOR
ENSMUSG00000029684	Wasl	ENSMUST00000201867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034648	Lrrn1	ENSMUST00000049285	ENSMUSP00000037096	TRANSLATION	protein_coding	-	CCDS20399.1	1	716	0	0.42	7.5	197.6	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000079560	Hoxa3	ENSMUST00000148446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079560	Hoxa3	ENSMUST00000134831	ENSMUSP00000114711	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079560	Hoxa3	ENSMUST00000142764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079560	Hoxa3	ENSMUST00000114434	ENSMUSP00000110077	TRANSLATION	protein_coding	-	CCDS20140.1	1	443	0	0.4	5.1	174.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040234	Tm7sf3	ENSMUST00000127529	ENSMUSP00000118517	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000040234	Tm7sf3	ENSMUST00000138476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040234	Tm7sf3	ENSMUST00000147027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040234	Tm7sf3	ENSMUST00000037709	ENSMUSP00000045650	TRANSLATION	protein_coding	-	CCDS20699.1	1	565	0	0	1.5	129.8	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000046679	C87436	ENSMUST00000113700	ENSMUSP00000109330	TRANSLATION	protein_coding	-	CCDS20313.1	1	574	4	0	8.8	71.3	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000046679	C87436	ENSMUST00000143430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046679	C87436	ENSMUST00000113698	ENSMUSP00000109328	TRANSLATION	protein_coding	-	CCDS57435.1	1	564	4	0	0.5	71.3	0	-4,-6	-	-	10	MINOR
ENSMUSG00000046679	C87436	ENSMUST00000203568	ENSMUSP00000144724	TRANSLATION	protein_coding	stop	-	2	125	4	0	0	71.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046679	C87436	ENSMUST00000133753	ENSMUSP00000121520	TRANSLATION	nonsense_mediated_decay	-	-	1	387	4	0	0	71.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046679	C87436	ENSMUST00000148768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046679	C87436	ENSMUST00000141972	ENSMUSP00000115916	TRANSLATION	nonsense_mediated_decay	-	-	1	387	4	0	0	71.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046679	C87436	ENSMUST00000050497	ENSMUSP00000057461	TRANSLATION	protein_coding	-	CCDS20313.1	1	574	4	0	8.8	71.3	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000096833	Igkv4-55	ENSMUST00000103359	ENSMUSP00000100160	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	62.9	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000057841	Rpl32	ENSMUST00000081840	ENSMUSP00000080523	TRANSLATION	protein_coding	-	CCDS20443.1	1	135	0	1.24	21.5	203.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000057841	Rpl32	ENSMUST00000203816	ENSMUSP00000145350	TRANSLATION	protein_coding	-	CCDS20443.1	2	135	0	1.24	21.5	203.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000039070	Cpa4	ENSMUST00000049251	ENSMUSP00000048558	TRANSLATION	protein_coding	-	CCDS19975.1	1	420	9	9.95	6.3	384	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000037140	Tas2r108	ENSMUST00000038750	ENSMUSP00000044089	TRANSLATION	protein_coding	-	CCDS20032.1	-	297	0	0	0.5	305.1	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029697	Fezf1	ENSMUST00000031709	ENSMUSP00000031709	TRANSLATION	protein_coding	-	CCDS51725.1	1	475	24	2.6	3.9	125.7	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000033082	Clec1a	ENSMUST00000204012	ENSMUSP00000145071	TRANSLATION	protein_coding	stop	-	3	164	2	1.526	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033082	Clec1a	ENSMUST00000037481	ENSMUSP00000047065	TRANSLATION	protein_coding	-	CCDS20587.1	1	269	4	2.726	2.8	54.9	1	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000033082	Clec1a	ENSMUST00000204952	ENSMUSP00000145497	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033082	Clec1a	ENSMUST00000203162	ENSMUSP00000144896	TRANSLATION	protein_coding	-	CCDS85169.1	1	206	2	1.626	0.5	0	1	-4,-6	-	-	5.576	MINOR
ENSMUSG00000076587	Igkv6-20	ENSMUST00000103388	ENSMUSP00000100189	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	64.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076474	Trbv17	ENSMUST00000103275	ENSMUSP00000100091	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	43.4	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000013736	Trnt1	ENSMUST00000113249	ENSMUSP00000108875	TRANSLATION	protein_coding	-	CCDS20397.1	1	434	13	8.25	7.5	118.6	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000013736	Trnt1	ENSMUST00000057578	ENSMUSP00000060900	TRANSLATION	protein_coding	-	CCDS20397.1	1	434	13	8.25	7.5	118.6	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000013736	Trnt1	ENSMUST00000154026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013736	Trnt1	ENSMUST00000205163	ENSMUSP00000144943	TRANSLATION	protein_coding	stop	-	2	71	3	1.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000013736	Trnt1	ENSMUST00000204782	ENSMUSP00000144850	TRANSLATION	protein_coding	stop	-	3	134	3	3.5	0	63.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000013736	Trnt1	ENSMUST00000113247	ENSMUSP00000108873	TRANSLATION	protein_coding	-	CCDS57443.1	1	215	13	5.45	0.5	118.6	0	-4,0	-	-	12.402	MINOR
ENSMUSG00000013736	Trnt1	ENSMUST00000147084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013736	Trnt1	ENSMUST00000113248	ENSMUSP00000108874	TRANSLATION	protein_coding	-	CCDS20397.1	1	434	13	8.25	7.5	118.6	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000047104	Pbp2	ENSMUST00000050471	ENSMUSP00000098414	TRANSLATION	protein_coding	-	CCDS20646.1	-	187	12	1	11.6	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057716	Tmem178b	ENSMUST00000180588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057716	Tmem178b	ENSMUST00000180886	ENSMUSP00000137869	TRANSLATION	protein_coding	-	-	5	262	0	0	0	36.6	3	0,-4	-	-	3.132	MINOR
ENSMUSG00000057716	Tmem178b	ENSMUST00000061740	ENSMUSP00000055268	TRANSLATION	protein_coding	-	CCDS39465.1	1	139	0	0	0.5	42.6	5	-3,-5	-	-	3.648	MINOR
ENSMUSG00000057716	Tmem178b	ENSMUST00000239008	ENSMUSP00000159180	TRANSLATION	protein_coding	-	-	-	294	0	0	17.3	70.1	6	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000076604	Igkj1	ENSMUST00000103405	ENSMUSP00000142962	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000029851	Tcaf2	ENSMUST00000031879	ENSMUSP00000031879	TRANSLATION	protein_coding	-	CCDS20075.1	1	919	2	1.38	1.5	264.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029851	Tcaf2	ENSMUST00000131341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061414	Cracr2a	ENSMUST00000071563	ENSMUSP00000071494	TRANSLATION	protein_coding	-	CCDS20566.1	1	310	5	0.84	0.5	37.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061414	Cracr2a	ENSMUST00000212051	ENSMUSP00000148569	TRANSLATION	protein_coding	-	-	5	726	24	5.79	0.5	196.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061414	Cracr2a	ENSMUST00000201303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041372	B4galnt3	ENSMUST00000212457	ENSMUSP00000148759	TRANSLATION	protein_coding	-	-	5	985	3	0	0.5	182	0	0,-6	-	-	9	ALTERNATIVE:2
ENSMUSG00000041372	B4galnt3	ENSMUST00000057283	ENSMUSP00000058253	TRANSLATION	protein_coding	-	CCDS20480.1	1	986	3	0	0.5	182	0	0,-6	-	-	9	PRINCIPAL:2
ENSMUSG00000041372	B4galnt3	ENSMUST00000125341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030335	Mrpl51	ENSMUST00000032485	ENSMUSP00000032485	TRANSLATION	protein_coding	-	CCDS20545.1	1	128	0	2.75	3.9	119.5	0	-3,1	-	-	13	PRINCIPAL:1
ENSMUSG00000030335	Mrpl51	ENSMUST00000144380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030335	Mrpl51	ENSMUST00000136804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029810	Tmem176b	ENSMUST00000203618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029810	Tmem176b	ENSMUST00000203265	ENSMUSP00000144869	TRANSLATION	protein_coding	stop	-	3	194	0	0	0	122.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029810	Tmem176b	ENSMUST00000205147	ENSMUSP00000145235	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	122.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029810	Tmem176b	ENSMUST00000203501	ENSMUSP00000144742	TRANSLATION	protein_coding	stop	-	3	172	0	0	0	106.2	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029810	Tmem176b	ENSMUST00000204073	ENSMUSP00000144864	TRANSLATION	protein_coding	-	CCDS20116.1	2	263	0	0	0.5	147.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029810	Tmem176b	ENSMUST00000203355	ENSMUSP00000145395	TRANSLATION	protein_coding	-	CCDS20116.1	5	263	0	0	0.5	147.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029810	Tmem176b	ENSMUST00000203229	ENSMUSP00000144865	TRANSLATION	protein_coding	stop	-	2	195	0	0	0	122.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029810	Tmem176b	ENSMUST00000101429	ENSMUSP00000098972	TRANSLATION	protein_coding	-	CCDS20116.1	5	263	0	0	0.5	147.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029810	Tmem176b	ENSMUST00000204783	ENSMUSP00000144810	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	41.7	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000029810	Tmem176b	ENSMUST00000164733	ENSMUSP00000128705	TRANSLATION	protein_coding	-	CCDS20116.1	1	263	0	0	0.5	147.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029810	Tmem176b	ENSMUST00000166247	ENSMUSP00000131064	TRANSLATION	protein_coding	-	CCDS20116.1	1	263	0	0	0.5	147.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000029810	Tmem176b	ENSMUST00000205159	ENSMUSP00000144949	TRANSLATION	protein_coding	stop	-	5	196	0	0	0	123.6	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000029752	Asns	ENSMUST00000126303	ENSMUSP00000115415	TRANSLATION	protein_coding	stop	-	3	223	11	1.98	0	29.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029752	Asns	ENSMUST00000031766	ENSMUSP00000031766	TRANSLATION	protein_coding	-	CCDS19907.1	1	561	23	7.9	7.5	187.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000029752	Asns	ENSMUST00000139596	ENSMUSP00000120489	TRANSLATION	protein_coding	stop	-	3	158	11	1.98	0	26.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029752	Asns	ENSMUST00000140097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029752	Asns	ENSMUST00000115542	ENSMUSP00000111204	TRANSLATION	protein_coding	-	CCDS19907.1	5	561	23	7.9	7.5	187.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000029752	Asns	ENSMUST00000148349	ENSMUSP00000118003	TRANSLATION	protein_coding	stop	-	3	127	11	1.18	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029752	Asns	ENSMUST00000133972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071506	Tmem139	ENSMUST00000238607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071506	Tmem139	ENSMUST00000095987	ENSMUSP00000100590	TRANSLATION	protein_coding	-	CCDS51757.1	2	214	0	0	1.5	25.7	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029664	Tfpi2	ENSMUST00000183682	ENSMUSP00000139066	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029664	Tfpi2	ENSMUST00000031674	ENSMUSP00000031674	TRANSLATION	protein_coding	-	CCDS19892.1	1	230	0	4.31	1.5	164.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000029664	Tfpi2	ENSMUST00000203257	ENSMUSP00000145193	TRANSLATION	protein_coding	stop	-	3	111	0	1.87	0	66.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032757	Bet1	ENSMUST00000145696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032757	Bet1	ENSMUST00000150319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032757	Bet1	ENSMUST00000204806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032757	Bet1	ENSMUST00000205191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032757	Bet1	ENSMUST00000049166	ENSMUSP00000044877	TRANSLATION	protein_coding	-	CCDS19895.1	1	118	0	0	11.5	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000032757	Bet1	ENSMUST00000203612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076476	Trbv20	ENSMUST00000103277	ENSMUSP00000100093	TRANSLATION	TR_V_gene	stop	-	-	111	0	1	0	42.8	0	3,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000107588	Gm45021	ENSMUST00000204521	ENSMUSP00000145172	TRANSLATION	protein_coding,RT	stop	-	5	7	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076500	Gm20730	ENSMUST00000103301	ENSMUSP00000100102	TRANSLATION	IG_LV_gene	stop	-	5	119	2	1.5	0	63.1	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000018341	Il12rb2	ENSMUST00000018485	ENSMUSP00000010605	TRANSLATION	protein_coding	-	CCDS20220.1	1	874	0	6.16	0.5	166.9	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000018341	Il12rb2	ENSMUST00000117441	ENSMUSP00000113267	TRANSLATION	protein_coding	-	CCDS80543.1	1	540	0	3.06	0.5	73.8	1	-4,-5	-	-	0.414	MINOR
ENSMUSG00000076469	Trbv13-2	ENSMUST00000103270	ENSMUSP00000100086	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	61.9	0	4,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000000938	Hoxa10	ENSMUST00000121043	ENSMUSP00000112872	TRANSLATION	protein_coding	-	CCDS51775.1	2	94	0	1	3.9	75.6	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000000938	Hoxa10	ENSMUST00000125581	ENSMUSP00000120276	TRANSLATION	protein_coding	-	CCDS20147.2	1	416	0	1	1.5	75.6	0	-4,-7	-	-	12.172	PRINCIPAL:3
ENSMUSG00000000938	Hoxa10	ENSMUST00000142611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000938	Hoxa10	ENSMUST00000126402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030167	Klrc1	ENSMUST00000032271	ENSMUSP00000032271	TRANSLATION	protein_coding	-	CCDS51926.1	1	244	3	2.4	0.5	46.5	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000030167	Klrc1	ENSMUST00000032270	ENSMUSP00000032270	TRANSLATION	protein_coding	-	CCDS51926.1	1	244	3	2.4	0.5	46.5	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000030167	Klrc1	ENSMUST00000169545	ENSMUSP00000130762	TRANSLATION	protein_coding	-	CCDS80621.1	1	210	3	2.4	0.5	46.5	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000030167	Klrc1	ENSMUST00000118447	ENSMUSP00000114017	TRANSLATION	protein_coding	-	CCDS39663.1	1	227	3	2.4	0.5	46.5	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000063063	Ctnna2	ENSMUST00000162273	ENSMUSP00000124689	TRANSLATION	protein_coding	-	-	1	356	0	6	0	348.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000063063	Ctnna2	ENSMUST00000075340	ENSMUSP00000074809	TRANSLATION	protein_coding	-	CCDS39521.1	5	905	0	17.25	15.1	1074.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000063063	Ctnna2	ENSMUST00000204527	ENSMUSP00000144890	TRANSLATION	nonsense_mediated_decay	start	-	5	243	0	4.75	0	317	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063063	Ctnna2	ENSMUST00000160252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063063	Ctnna2	ENSMUST00000159626	ENSMUSP00000124376	TRANSLATION	protein_coding	-	CCDS20250.1	1	953	0	16.75	12.8	1045.4	0	-4,-6	-	-	12.606	MINOR
ENSMUSG00000063063	Ctnna2	ENSMUST00000160894	ENSMUSP00000124764	TRANSLATION	protein_coding	-	-	1	966	0	16.75	1.5	1045.3	0	-4,-5	-	-	9.392	MINOR
ENSMUSG00000063063	Ctnna2	ENSMUST00000161846	ENSMUSP00000123714	TRANSLATION	protein_coding	-	-	1	918	0	17.25	1.5	1074.4	0	-4,-5	-	-	12.14	MINOR
ENSMUSG00000063063	Ctnna2	ENSMUST00000162991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051169	Rpusd3	ENSMUST00000129560	ENSMUSP00000114511	TRANSLATION	protein_coding	stop	-	5	117	0	0.2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000051169	Rpusd3	ENSMUST00000060634	ENSMUSP00000059057	TRANSLATION	protein_coding	-	CCDS85119.1	1	279	0	2.978	0.5	54	0	-4,0	-	-	7.668	MINOR
ENSMUSG00000051169	Rpusd3	ENSMUST00000113092	ENSMUSP00000108715	TRANSLATION	protein_coding	-	CCDS51872.1	1	344	0	4.578	2.7	66.6	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000051169	Rpusd3	ENSMUST00000203758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051169	Rpusd3	ENSMUST00000134853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051169	Rpusd3	ENSMUST00000150452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051169	Rpusd3	ENSMUST00000147726	ENSMUSP00000120250	TRANSLATION	protein_coding	start/stop	-	3	269	0	3.778	0	66.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000051169	Rpusd3	ENSMUST00000151618	ENSMUSP00000115950	TRANSLATION	protein_coding	start/stop	-	3	183	0	1.68	0	29.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000051169	Rpusd3	ENSMUST00000129047	ENSMUSP00000120380	TRANSLATION	protein_coding	-	-	1	315	0	3.778	0	66.6	0	-4,0	-	-	10.398	MINOR
ENSMUSG00000051169	Rpusd3	ENSMUST00000124078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045514	Olfr460	ENSMUST00000216942	ENSMUSP00000151187	TRANSLATION	protein_coding	-	CCDS20035.1	5	314	0	0.2	8.8	149.9	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000045514	Olfr460	ENSMUST00000051540	ENSMUSP00000054887	TRANSLATION	protein_coding	-	CCDS20035.1	-	314	0	0.2	8.8	149.9	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000014542	Clec4f	ENSMUST00000137647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014542	Clec4f	ENSMUST00000014686	ENSMUSP00000014686	TRANSLATION	protein_coding	-	CCDS20281.1	1	548	9	2.64	1.5	92.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025607	Copg2	ENSMUST00000151973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025607	Copg2	ENSMUST00000122833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025607	Copg2	ENSMUST00000134137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025607	Copg2	ENSMUST00000166192	ENSMUSP00000126726	TRANSLATION	protein_coding	-	-	1	870	0	20.775	13.6	784.6	0	-4,-5	-	-	15.454	ALTERNATIVE:1
ENSMUSG00000025607	Copg2	ENSMUST00000131256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025607	Copg2	ENSMUST00000133916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025607	Copg2	ENSMUST00000048774	ENSMUSP00000038368	TRANSLATION	protein_coding	-	CCDS85027.1	1	871	0	20.775	13.6	793.7	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000025607	Copg2	ENSMUST00000135230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030230	Plcz1	ENSMUST00000032356	ENSMUSP00000032356	TRANSLATION	protein_coding	-	CCDS20671.1	1	647	9	9.36	1.5	462.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030230	Plcz1	ENSMUST00000149931	ENSMUSP00000117043	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030230	Plcz1	ENSMUST00000137148	ENSMUSP00000121908	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030230	Plcz1	ENSMUST00000129986	ENSMUSP00000119121	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056832	Ttc26	ENSMUST00000160215	ENSMUSP00000125097	TRANSLATION	nonsense_mediated_decay	-	-	3	101	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056832	Ttc26	ENSMUST00000161751	ENSMUSP00000124271	TRANSLATION	protein_coding	stop	-	3	210	0	1.83	0	30.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056832	Ttc26	ENSMUST00000162486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056832	Ttc26	ENSMUST00000159145	ENSMUSP00000124873	TRANSLATION	nonsense_mediated_decay	-	-	1	203	0	1.2	0	30.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056832	Ttc26	ENSMUST00000162554	ENSMUSP00000124369	TRANSLATION	protein_coding	-	CCDS51750.1	1	554	0	1.896	11.5	30.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000076547	Igkv4-70	ENSMUST00000103348	ENSMUSP00000100149	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	59.6	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000029862	Clcn1	ENSMUST00000164091	ENSMUSP00000131354	TRANSLATION	nonsense_mediated_decay	-	-	5	258	0	2.9	0	69.4	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000114684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029862	Clcn1	ENSMUST00000168660	ENSMUSP00000126045	TRANSLATION	nonsense_mediated_decay	start	-	2	257	0	3.65	0	78.3	13	-4,-5	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000163936	ENSMUSP00000130148	TRANSLATION	protein_coding	start	-	5	923	0	12.122	0	231.7	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000169902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029862	Clcn1	ENSMUST00000031894	ENSMUSP00000031894	TRANSLATION	protein_coding	-	CCDS39471.1	1	994	0	13.122	1.5	285.5	21	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029862	Clcn1	ENSMUST00000163235	ENSMUSP00000132387	TRANSLATION	nonsense_mediated_decay	start	-	5	104	0	0.398	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000170028	ENSMUSP00000132154	TRANSLATION	nonsense_mediated_decay	start	-	5	289	0	2.9	0	69.4	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000165780	ENSMUSP00000130550	TRANSLATION	nonsense_mediated_decay	start	-	5	229	0	2.9	0	69.4	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000169024	ENSMUSP00000130968	TRANSLATION	nonsense_mediated_decay	start	-	5	262	0	3.65	0	77.5	13	-4,-6	-	-	-1	MINOR
ENSMUSG00000029862	Clcn1	ENSMUST00000238845	ENSMUSP00000158998	TRANSLATION	protein_coding	stop	-	-	326	0	4.65	0	119.7	13	-4,-6	-	-	-1	MINOR
ENSMUSG00000095351	Igkv3-2	ENSMUST00000103403	ENSMUSP00000100204	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	68.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000115799	Vmn1r19	ENSMUST00000089830	ENSMUSP00000087264	TRANSLATION	protein_coding	-	CCDS20182.1	-	308	0	0	0.5	190.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072770	Acrbp	ENSMUST00000124159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072770	Acrbp	ENSMUST00000112413	ENSMUSP00000108032	TRANSLATION	protein_coding	-	-	2	170	0	0	0	318.3	0	3,-2	-	-	0	MINOR
ENSMUSG00000072770	Acrbp	ENSMUST00000136100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072770	Acrbp	ENSMUST00000112412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072770	Acrbp	ENSMUST00000032481	ENSMUSP00000032481	TRANSLATION	protein_coding	-	-	1	167	0	0	0	247.8	0	3,-2	-	-	0	MINOR
ENSMUSG00000072770	Acrbp	ENSMUST00000112414	ENSMUSP00000108033	TRANSLATION	protein_coding	-	CCDS51910.1	1	316	0	0	1.5	453.8	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000072770	Acrbp	ENSMUST00000088294	ENSMUSP00000085632	TRANSLATION	protein_coding	-	CCDS20542.1	1	540	0	0	1.5	453.8	0	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000030079	Ruvbl1	ENSMUST00000032165	ENSMUSP00000032165	TRANSLATION	protein_coding	-	CCDS20336.1	1	456	13	10.83	19.5	651.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030079	Ruvbl1	ENSMUST00000129035	ENSMUSP00000117925	TRANSLATION	protein_coding	stop	-	3	134	7	3.25	0	197.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029682	Spam1	ENSMUST00000202331	ENSMUSP00000143944	TRANSLATION	protein_coding	-	CCDS19947.1	1	512	0	2.4	1.5	444.9	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029682	Spam1	ENSMUST00000202569	ENSMUSP00000143970	TRANSLATION	protein_coding	-	CCDS19947.1	1	512	0	2.4	1.5	444.9	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029682	Spam1	ENSMUST00000202786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029682	Spam1	ENSMUST00000031693	ENSMUSP00000031693	TRANSLATION	protein_coding	-	CCDS19947.1	1	512	0	2.4	1.5	444.9	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017978	Cadps2	ENSMUST00000163871	ENSMUSP00000128905	TRANSLATION	protein_coding	-	-	5	1304	0	7.525	5.1	158.9	0	-4,-5	-	-	13.754	ALTERNATIVE:1
ENSMUSG00000017978	Cadps2	ENSMUST00000069074	ENSMUSP00000064876	TRANSLATION	protein_coding	-	-	5	1297	0	7.327	1	148.9	0	-4,-5	-	-	10.758	MINOR
ENSMUSG00000017978	Cadps2	ENSMUST00000166458	ENSMUSP00000125972	TRANSLATION	protein_coding	-	-	5	1275	0	7.525	0	162.8	0	-4,-5	-	-	11.988	MINOR
ENSMUSG00000017978	Cadps2	ENSMUST00000125350	ENSMUSP00000115866	TRANSLATION	protein_coding	start	-	5	899	0	7.327	0	148.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017978	Cadps2	ENSMUST00000115355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017978	Cadps2	ENSMUST00000115361	ENSMUSP00000111018	TRANSLATION	protein_coding	-	CCDS57411.1	1	1259	0	7.327	3.9	148.9	0	-4,-5	-	-	12.172	MINOR
ENSMUSG00000017978	Cadps2	ENSMUST00000115358	ENSMUSP00000111015	TRANSLATION	protein_coding	-	CCDS57412.1	5	1264	0	7.525	5.1	163	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000017978	Cadps2	ENSMUST00000115356	ENSMUSP00000111013	TRANSLATION	protein_coding	-	CCDS57413.1	1	768	0	3.43	0.5	36.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017978	Cadps2	ENSMUST00000018122	ENSMUSP00000018122	TRANSLATION	protein_coding	-	CCDS39439.1	5	1304	0	7.525	5.1	163	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000017978	Cadps2	ENSMUST00000152131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017978	Cadps2	ENSMUST00000136279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017978	Cadps2	ENSMUST00000156986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017978	Cadps2	ENSMUST00000142913	ENSMUSP00000138167	TRANSLATION	protein_coding	-	-	5	1275	0	7.525	0	163	0	-4,-5	-	-	12	MINOR
ENSMUSG00000042460	C1galt1	ENSMUST00000040159	ENSMUSP00000047931	TRANSLATION	protein_coding	-	CCDS19908.1	1	363	0	0	3.9	57.4	0	0,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000030319	Cand2	ENSMUST00000075995	ENSMUSP00000075377	TRANSLATION	protein_coding	-	CCDS20442.1	1	1235	0	14.35	7.5	204.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042638	Gucy2c	ENSMUST00000078095	ENSMUSP00000077236	TRANSLATION	protein_coding	-	CCDS20653.1	1	1048	1	8.935	0.5	355.2	1	1,-3	-	-	10.842	MINOR
ENSMUSG00000042638	Gucy2c	ENSMUST00000032338	ENSMUSP00000032338	TRANSLATION	protein_coding	-	CCDS51941.1	1	1072	1	9.355	1.5	360.5	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000029910	Mad2l1	ENSMUST00000101343	ENSMUSP00000098897	TRANSLATION	protein_coding	-	CCDS20210.1	1	205	0	4.75	2.8	80.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029910	Mad2l1	ENSMUST00000135411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029910	Mad2l1	ENSMUST00000125430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029910	Mad2l1	ENSMUST00000116605	ENSMUSP00000112304	TRANSLATION	protein_coding	-	CCDS20210.1	1	205	0	4.75	2.8	80.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000072780	Vmn2r24	ENSMUST00000232985	ENSMUSP00000156600	TRANSLATION	protein_coding	-	-	-	567	5	1.82	0	112.5	0	0,-3	-	-	6.518	MINOR
ENSMUSG00000072780	Vmn2r24	ENSMUST00000233759	ENSMUSP00000156764	TRANSLATION	protein_coding	-	-	-	585	5	3.64	0	312.7	7	0,-3	-	-	11.816	MINOR
ENSMUSG00000072780	Vmn2r24	ENSMUST00000075095	ENSMUSP00000074602	TRANSLATION	protein_coding	-	CCDS51902.1	5	854	5	4.06	0.5	385.1	7	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000040797	Iqsec3	ENSMUST00000152103	ENSMUSP00000116317	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040797	Iqsec3	ENSMUST00000129815	ENSMUSP00000120847	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040797	Iqsec3	ENSMUST00000151397	ENSMUSP00000145523	TRANSLATION	protein_coding	-	-	2	722	0	1	0	44	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040797	Iqsec3	ENSMUST00000046373	ENSMUSP00000038653	TRANSLATION	protein_coding	-	CCDS20491.1	1	1195	0	7	0.5	391	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030091	Nup210	ENSMUST00000141952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030091	Nup210	ENSMUST00000142951	ENSMUSP00000120098	TRANSLATION	protein_coding	start	-	1	1076	0	0	0	39.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030091	Nup210	ENSMUST00000148397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030091	Nup210	ENSMUST00000139051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030091	Nup210	ENSMUST00000151437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030091	Nup210	ENSMUST00000032179	ENSMUSP00000032179	TRANSLATION	protein_coding	-	CCDS39565.1	1	1886	0	0	1.5	39.2	1	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000030091	Nup210	ENSMUST00000204740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030091	Nup210	ENSMUST00000113509	ENSMUSP00000109137	TRANSLATION	protein_coding	-	-	1	1842	0	0	0	39.2	1	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000030091	Nup210	ENSMUST00000123340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030091	Nup210	ENSMUST00000203434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030091	Nup210	ENSMUST00000153350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051586	Mical3	ENSMUST00000207993	ENSMUSP00000146780	TRANSLATION	protein_coding	stop	-	3	56	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000204994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051586	Mical3	ENSMUST00000203254	ENSMUSP00000145254	TRANSLATION	nonsense_mediated_decay	-	-	1	661	34	11.62	0	74.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000203095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051586	Mical3	ENSMUST00000077159	ENSMUSP00000076402	TRANSLATION	protein_coding	-	CCDS20487.1	1	864	40	12.42	0.5	103.6	0	-4,-5	-	-	5.334	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000238968	ENSMUSP00000159123	TRANSLATION	protein_coding	-	-	-	2044	41	17.42	0	271.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000051586	Mical3	ENSMUST00000204302	ENSMUSP00000144972	TRANSLATION	protein_coding	start	-	1	268	7	1.25	0	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000204248	ENSMUSP00000145439	TRANSLATION	protein_coding	stop	-	5	695	34	11.62	0	74.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000140854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051586	Mical3	ENSMUST00000205030	ENSMUSP00000144882	TRANSLATION	protein_coding	start	-	3	216	6	0.8	0	29.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000238957	ENSMUSP00000158944	TRANSLATION	protein_coding	-	-	-	1968	41	17.42	0	271.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000051586	Mical3	ENSMUST00000207968	ENSMUSP00000147139	TRANSLATION	protein_coding	stop	-	2	65	0	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000098457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051586	Mical3	ENSMUST00000207889	ENSMUSP00000146544	TRANSLATION	protein_coding	-	CCDS85152.1	5	1993	41	17.42	0.5	271.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000051586	Mical3	ENSMUST00000212333	ENSMUSP00000148611	TRANSLATION	protein_coding	start	-	5	1139	0	4.3	0	161.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000204644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051586	Mical3	ENSMUST00000151602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051586	Mical3	ENSMUST00000238920	ENSMUSP00000159047	TRANSLATION	protein_coding	-	-	-	2014	41	17.42	0	271.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000051586	Mical3	ENSMUST00000203188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051586	Mical3	ENSMUST00000205020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051586	Mical3	ENSMUST00000142924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051586	Mical3	ENSMUST00000212208	ENSMUSP00000148750	TRANSLATION	protein_coding	start	-	5	451	6	1.8	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051586	Mical3	ENSMUST00000150503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108022	Gm7298	ENSMUST00000204124	ENSMUSP00000145242	TRANSLATION	protein_coding	-	-	5	1476	2	28.05	0.5	704.4	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030034	Ino80b	ENSMUST00000032109	ENSMUSP00000032109	TRANSLATION	protein_coding	-	CCDS39530.1	1	345	4	0	0.5	100.3	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000030034	Ino80b	ENSMUST00000143814	ENSMUSP00000117556	TRANSLATION	nonsense_mediated_decay	-	-	5	25	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030034	Ino80b	ENSMUST00000113935	ENSMUSP00000109568	TRANSLATION	protein_coding	-	-	1	358	4	0	4.6	100.3	0	-4,-6	-	-	11	ALTERNATIVE:1
ENSMUSG00000030034	Ino80b	ENSMUST00000203085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096630	Vmn2r26	ENSMUST00000232707	ENSMUSP00000156965	TRANSLATION	nonsense_mediated_decay	-	-	-	529	5	2.04	0	108.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000096630	Vmn2r26	ENSMUST00000032238	ENSMUSP00000032238	TRANSLATION	protein_coding	-	CCDS20515.1	1	855	5	3.4	0.5	379.7	0	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000096630	Vmn2r26	ENSMUST00000233955	ENSMUSP00000156611	TRANSLATION	nonsense_mediated_decay	-	-	-	500	5	1.06	0	108.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000059900	Tmem40	ENSMUST00000170625	ENSMUSP00000130407	TRANSLATION	protein_coding	-	CCDS51879.1	3	200	0	0	1.5	236.8	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000059900	Tmem40	ENSMUST00000112946	ENSMUSP00000108568	TRANSLATION	protein_coding	-	-	1	266	0	0	0.5	236.8	1	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000059900	Tmem40	ENSMUST00000127728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059900	Tmem40	ENSMUST00000072933	ENSMUSP00000072704	TRANSLATION	protein_coding	-	CCDS39601.1	1	225	0	0	0.5	236.8	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000059900	Tmem40	ENSMUST00000151849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059900	Tmem40	ENSMUST00000166254	ENSMUSP00000131697	TRANSLATION	protein_coding	-	CCDS39601.1	5	225	0	0	0.5	236.8	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000044086	Lmod3	ENSMUST00000095655	ENSMUSP00000093315	TRANSLATION	protein_coding	-	CCDS39576.1	1	571	0	0.6	0.5	38.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055594	5530400C23Rik	ENSMUST00000048459	ENSMUSP00000035635	TRANSLATION	protein_coding	-	CCDS51935.1	1	173	0	0	0.5	39.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032641	Gpr19	ENSMUST00000203409	ENSMUSP00000145128	TRANSLATION	protein_coding	stop	-	3	135	0	1.2	0	59.5	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000204880	ENSMUSP00000144918	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000111932	ENSMUSP00000107563	TRANSLATION	protein_coding	-	CCDS20641.1	1	409	0	1.62	0.5	150.1	14	-4,-7	-	-	12	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000203762	ENSMUSP00000145441	TRANSLATION	protein_coding	-	-	3	96	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000046255	ENSMUSP00000047630	TRANSLATION	protein_coding	-	CCDS51937.1	1	415	0	1.62	5.1	150.1	14	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032641	Gpr19	ENSMUST00000156379	ENSMUSP00000150855	TRANSLATION	protein_coding	stop	-	5	54	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000066107	ENSMUSP00000066287	TRANSLATION	protein_coding	-	-	1	501	0	1.62	0.5	150.1	14	-4,0	-	-	12	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000149375	ENSMUSP00000149633	TRANSLATION	protein_coding	stop	-	5	67	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000152140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032641	Gpr19	ENSMUST00000215088	ENSMUSP00000149995	TRANSLATION	protein_coding	-	-	5	464	0	1.62	0	150.1	14	-4,-1	-	-	12	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000204908	ENSMUSP00000149612	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000165392	ENSMUSP00000127876	TRANSLATION	protein_coding	-	CCDS20641.1	3	409	0	1.62	0.5	150.1	14	-4,-7	-	-	12	MINOR
ENSMUSG00000032641	Gpr19	ENSMUST00000116515	ENSMUSP00000112214	TRANSLATION	protein_coding	-	CCDS20641.1	1	409	0	1.62	0.5	150.1	14	-4,-7	-	-	12	MINOR
ENSMUSG00000067610	Klri1	ENSMUST00000088046	ENSMUSP00000085362	TRANSLATION	protein_coding	-	CCDS20593.1	1	248	3	2.4	0.5	36.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059410	Tas2r125	ENSMUST00000076119	ENSMUSP00000075483	TRANSLATION	protein_coding	-	CCDS20628.1	-	311	0	0	1.5	297.4	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055912	Tmem150a	ENSMUST00000132243	ENSMUSP00000138445	TRANSLATION	protein_coding	-	-	5	168	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000055912	Tmem150a	ENSMUST00000206531	ENSMUSP00000145673	TRANSLATION	protein_coding	stop	-	5	174	0	0	0	133.3	6	1,-2	-	-	-1	MINOR
ENSMUSG00000055912	Tmem150a	ENSMUST00000069695	ENSMUSP00000063977	TRANSLATION	protein_coding	-	CCDS20239.1	1	271	0	0	10.8	204.4	8	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000055912	Tmem150a	ENSMUST00000206064	ENSMUSP00000146268	TRANSLATION	protein_coding	stop	-	5	120	0	0	0	93.7	2	0,-3	-	-	-1	MINOR
ENSMUSG00000055912	Tmem150a	ENSMUST00000206821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076538	Igkv13-84	ENSMUST00000103339	ENSMUSP00000100140	TRANSLATION	IG_V_gene	stop	-	-	115	2	1.16	0	53.3	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000068574	Olfr458	ENSMUST00000216650	ENSMUSP00000149459	TRANSLATION	protein_coding	-	CCDS20071.1	5	313	0	0.42	5.2	174.7	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068574	Olfr458	ENSMUST00000090156	ENSMUSP00000087617	TRANSLATION	protein_coding	-	CCDS20071.1	-	313	0	0.42	5.2	174.7	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029757	Dync1i1	ENSMUST00000115554	ENSMUSP00000111216	TRANSLATION	protein_coding	-	CCDS57408.1	1	608	0	5	11.5	67.6	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000029757	Dync1i1	ENSMUST00000153942	ENSMUSP00000121787	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029757	Dync1i1	ENSMUST00000203520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029757	Dync1i1	ENSMUST00000115556	ENSMUSP00000111218	TRANSLATION	protein_coding	-	CCDS57409.1	1	617	0	5	5.5	67.6	0	-4,-5	-	-	13.287	MINOR
ENSMUSG00000029757	Dync1i1	ENSMUST00000115555	ENSMUSP00000111217	TRANSLATION	protein_coding	-	-	5	645	0	5	8.3	67.6	0	-4,-5	-	-	14.085	ALTERNATIVE:1
ENSMUSG00000029757	Dync1i1	ENSMUST00000115559	ENSMUSP00000111221	TRANSLATION	protein_coding	-	CCDS19903.1	1	628	0	5	11.5	67.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000029757	Dync1i1	ENSMUST00000204149	ENSMUSP00000145221	TRANSLATION	protein_coding	start	-	3	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000202086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000201603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000201617	ENSMUSP00000144570	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	29.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000202964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000201520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000201113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030347	D6Wsu163e	ENSMUST00000032497	ENSMUSP00000032497	TRANSLATION	protein_coding	-	CCDS20560.1	1	552	0	0	7.5	714.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000029998	Pcyox1	ENSMUST00000032065	ENSMUSP00000032065	TRANSLATION	protein_coding	-	CCDS20311.1	1	505	22	1.5	3.9	556	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000029998	Pcyox1	ENSMUST00000203960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029998	Pcyox1	ENSMUST00000129650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029998	Pcyox1	ENSMUST00000204116	ENSMUSP00000145474	TRANSLATION	protein_coding	-	-	5	148	16	1.5	0	46.4	0	3,-2	-	-	7.998	MINOR
ENSMUSG00000029998	Pcyox1	ENSMUST00000131500	ENSMUSP00000122602	TRANSLATION	protein_coding	start/stop	-	3	197	4	0	0	202	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029998	Pcyox1	ENSMUST00000153723	ENSMUSP00000119449	TRANSLATION	protein_coding	stop	-	2	214	2	0.7	0	228	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034930	Rtkn	ENSMUST00000203183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034930	Rtkn	ENSMUST00000130622	ENSMUSP00000122660	TRANSLATION	protein_coding	stop	-	3	217	0	0	0	101.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034930	Rtkn	ENSMUST00000129316	ENSMUSP00000120640	TRANSLATION	protein_coding	stop	-	3	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034930	Rtkn	ENSMUST00000213056	ENSMUSP00000148398	TRANSLATION	protein_coding	start	-	3	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034930	Rtkn	ENSMUST00000133226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034930	Rtkn	ENSMUST00000135490	ENSMUSP00000116964	TRANSLATION	protein_coding	stop	-	5	233	0	0	0	153.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034930	Rtkn	ENSMUST00000065512	ENSMUSP00000065571	TRANSLATION	protein_coding	-	CCDS51817.1	1	564	0	0	3.9	153.2	0	-4,0	-	-	7.414	ALTERNATIVE:2
ENSMUSG00000034930	Rtkn	ENSMUST00000087938	ENSMUSP00000085249	TRANSLATION	protein_coding	-	CCDS20274.1	1	551	0	0	5.1	153.2	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000034930	Rtkn	ENSMUST00000121093	ENSMUSP00000112501	TRANSLATION	protein_coding	-	CCDS20274.1	1	551	0	0	5.1	153.2	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000095236	Olfr38	ENSMUST00000215796	ENSMUSP00000149726	TRANSLATION	protein_coding	-	CCDS20078.1	5	317	0	0.36	8.8	176.9	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095236	Olfr38	ENSMUST00000074499	ENSMUSP00000093654	TRANSLATION	protein_coding	-	CCDS20078.1	-	317	0	0.36	8.8	176.9	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000105606	Igkv2-109	ENSMUST00000103322	ENSMUSP00000100123	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	59	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000048108	Tmem72	ENSMUST00000129255	ENSMUSP00000122220	TRANSLATION	nonsense_mediated_decay	-	-	3	63	0	0	0	65.5	2	-3,-6	-	-	-1	MINOR
ENSMUSG00000048108	Tmem72	ENSMUST00000056623	ENSMUSP00000057942	TRANSLATION	protein_coding	-	CCDS20462.1	1	275	0	0	5.1	268.5	5	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000226345	ENSMUSP00000154318	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000089420	ENSMUSP00000100706	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000227747	ENSMUSP00000154656	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000068234	Vmn1r44	ENSMUST00000228183	ENSMUSP00000154163	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000068234	Vmn1r44	ENSMUST00000226171	ENSMUSP00000154711	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000068234	Vmn1r44	ENSMUST00000227625	ENSMUSP00000154294	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000068234	Vmn1r44	ENSMUST00000204656	ENSMUSP00000145135	TRANSLATION	protein_coding	-	CCDS39558.1	2	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000227456	ENSMUSP00000153772	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000227047	ENSMUSP00000153999	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000226120	ENSMUSP00000154014	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000068234	Vmn1r44	ENSMUST00000226760	ENSMUSP00000154174	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000228700	ENSMUSP00000154809	TRANSLATION	protein_coding	-	CCDS39558.1	-	310	0	0	1.5	486.2	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068234	Vmn1r44	ENSMUST00000227888	ENSMUSP00000153985	TRANSLATION	protein_coding	-	-	-	167	0	0	0	281.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000094808	1810009J06Rik	ENSMUST00000076638	ENSMUSP00000075935	TRANSLATION	protein_coding	-	CCDS20042.1	1	247	22	4.5	4	257.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000064330	Pde6h	ENSMUST00000204382	ENSMUSP00000145119	TRANSLATION	protein_coding	-	-	1	61	0	1	0	66.8	0	-4,-5	-	-	2.784	MINOR
ENSMUSG00000064330	Pde6h	ENSMUST00000057650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064330	Pde6h	ENSMUST00000204627	ENSMUSP00000145191	TRANSLATION	protein_coding	stop	-	3	73	0	2	0	137.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064330	Pde6h	ENSMUST00000137768	ENSMUSP00000119246	TRANSLATION	protein_coding	-	CCDS39686.1	1	83	0	2.33	8.8	163.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030203	Dusp16	ENSMUST00000203651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030203	Dusp16	ENSMUST00000100857	ENSMUSP00000098419	TRANSLATION	protein_coding	-	CCDS39679.1	1	660	8	6.65	1.5	209.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030203	Dusp16	ENSMUST00000148926	ENSMUSP00000144917	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030203	Dusp16	ENSMUST00000204083	ENSMUSP00000144834	TRANSLATION	nonsense_mediated_decay	-	-	5	143	0	2.5	0	52.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030203	Dusp16	ENSMUST00000149776	ENSMUSP00000144784	TRANSLATION	protein_coding	-	-	1	206	0	3.5	0	61.1	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030203	Dusp16	ENSMUST00000129433	ENSMUSP00000115925	TRANSLATION	protein_coding	-	CCDS85175.1	1	338	8	6.65	0.5	171.3	0	-4,-7	-	-	15.702	MINOR
ENSMUSG00000030203	Dusp16	ENSMUST00000203452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061353	Cxcl12	ENSMUST00000112871	ENSMUSP00000108492	TRANSLATION	protein_coding	-	CCDS39605.1	1	93	0	1.75	12.8	33.6	0	4,-1	-	-	16	PRINCIPAL:4
ENSMUSG00000061353	Cxcl12	ENSMUST00000112866	ENSMUSP00000108487	TRANSLATION	protein_coding	-	CCDS39606.1	1	89	0	1.75	12.8	33.6	0	4,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000061353	Cxcl12	ENSMUST00000134244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061353	Cxcl12	ENSMUST00000073043	ENSMUSP00000072800	TRANSLATION	protein_coding	-	CCDS20463.1	1	119	0	1.75	0.5	33.6	0	4,-1	-	-	12	MINOR
ENSMUSG00000059908	Mug1	ENSMUST00000204210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059908	Mug1	ENSMUST00000204943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059908	Mug1	ENSMUST00000148563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059908	Mug1	ENSMUST00000204485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059908	Mug1	ENSMUST00000032228	ENSMUSP00000032228	TRANSLATION	protein_coding	-	CCDS39618.1	1	1476	2	27.9	0.5	707.2	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000053604	Rpia	ENSMUST00000066134	ENSMUSP00000064158	TRANSLATION	protein_coding	-	CCDS39504.1	1	303	14	6.3	1.5	219.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000053604	Rpia	ENSMUST00000129244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053604	Rpia	ENSMUST00000124633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034037	Fgd5	ENSMUST00000146743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034037	Fgd5	ENSMUST00000113466	ENSMUSP00000109093	TRANSLATION	protein_coding	-	-	1	1356	3	13.21	0	209	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000034037	Fgd5	ENSMUST00000130369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034037	Fgd5	ENSMUST00000089334	ENSMUSP00000086748	TRANSLATION	protein_coding	-	CCDS20371.2	1	1514	3	13.21	0.5	209	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000029838	Ptn	ENSMUST00000101534	ENSMUSP00000099073	TRANSLATION	protein_coding	-	CCDS20005.1	1	168	0	2.9	8.8	185.8	0	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000029838	Ptn	ENSMUST00000201321	ENSMUSP00000144184	TRANSLATION	protein_coding	-	-	1	156	0	2.4	0	184.4	0	0,-4	-	-	10.884	MINOR
ENSMUSG00000030337	Vamp1	ENSMUST00000159547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030337	Vamp1	ENSMUST00000100942	ENSMUSP00000098503	TRANSLATION	protein_coding	-	CCDS39637.1	1	117	0	2.5	6.1	115.6	1	-4,-5	-	-	13.911	ALTERNATIVE:1
ENSMUSG00000030337	Vamp1	ENSMUST00000063588	ENSMUSP00000063466	TRANSLATION	protein_coding	-	-	2	171	0	2.5	0	112.4	2	-4,-5	-	-	11.622	MINOR
ENSMUSG00000030337	Vamp1	ENSMUST00000032487	ENSMUSP00000032487	TRANSLATION	protein_coding	-	CCDS20546.1	1	118	0	2.5	8.3	118.7	2	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000030337	Vamp1	ENSMUST00000205223	ENSMUSP00000144835	TRANSLATION	protein_coding	start	-	5	116	0	2.5	1.7	113.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030337	Vamp1	ENSMUST00000160523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051936	Prss58	ENSMUST00000063523	ENSMUSP00000069833	TRANSLATION	protein_coding	-	CCDS20040.1	1	241	4	3.5	1.5	131.7	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000000439	Mkrn2	ENSMUST00000000449	ENSMUSP00000000449	TRANSLATION	protein_coding	-	CCDS39600.1	1	416	16	0	2.7	105.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000439	Mkrn2	ENSMUST00000205248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000439	Mkrn2	ENSMUST00000204409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030177	Ccdc77	ENSMUST00000163827	ENSMUSP00000131970	TRANSLATION	protein_coding	stop	-	3	200	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030177	Ccdc77	ENSMUST00000112703	ENSMUSP00000108323	TRANSLATION	protein_coding	-	-	5	471	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000030177	Ccdc77	ENSMUST00000153435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030177	Ccdc77	ENSMUST00000123114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030177	Ccdc77	ENSMUST00000032283	ENSMUSP00000032283	TRANSLATION	protein_coding	-	CCDS20481.1	1	489	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000030177	Ccdc77	ENSMUST00000136829	ENSMUSP00000126554	TRANSLATION	nonsense_mediated_decay	-	-	5	154	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030177	Ccdc77	ENSMUST00000146667	ENSMUSP00000114664	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030177	Ccdc77	ENSMUST00000127146	ENSMUSP00000120896	TRANSLATION	nonsense_mediated_decay	-	-	1	157	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030177	Ccdc77	ENSMUST00000137271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030177	Ccdc77	ENSMUST00000144131	ENSMUSP00000127096	TRANSLATION	nonsense_mediated_decay	-	-	5	136	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046806	Cyren	ENSMUST00000115006	ENSMUSP00000110658	TRANSLATION	protein_coding	-	CCDS85030.1	1	184	0	0	0.5	135.3	0	-4,-7	-	-	4.806	MINOR
ENSMUSG00000046806	Cyren	ENSMUST00000140458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046806	Cyren	ENSMUST00000118559	ENSMUSP00000113335	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	64.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046806	Cyren	ENSMUST00000115007	ENSMUSP00000110659	TRANSLATION	protein_coding	-	CCDS19997.1	1	157	0	0	0.5	155.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000046806	Cyren	ENSMUST00000055097	ENSMUSP00000053349	TRANSLATION	protein_coding	-	CCDS19997.1	1	157	0	0	0.5	155.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041791	Capza3	ENSMUST00000043797	ENSMUSP00000038562	TRANSLATION	protein_coding	-	CCDS20672.1	-	299	0	0.8	6.3	210.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000041791	Capza3	ENSMUST00000204342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035104	Eva1a	ENSMUST00000150976	ENSMUSP00000122674	TRANSLATION	protein_coding	stop	-	2	67	0	0	0	79.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000035104	Eva1a	ENSMUST00000149023	ENSMUSP00000117345	TRANSLATION	protein_coding	stop	-	3	155	0	0	0.5	191.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000035104	Eva1a	ENSMUST00000150691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035104	Eva1a	ENSMUST00000042974	ENSMUSP00000037422	TRANSLATION	protein_coding	-	CCDS20261.1	1	156	0	0	0.5	193.4	2	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095668	Trbd1	ENSMUST00000178537	ENSMUSP00000141764	TRANSLATION	TR_D_gene	start/stop	-	-	4	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000002797	Ggct	ENSMUST00000204301	ENSMUSP00000145291	TRANSLATION	nonsense_mediated_decay	-	-	3	77	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002797	Ggct	ENSMUST00000204770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002797	Ggct	ENSMUST00000131475	ENSMUSP00000120154	TRANSLATION	protein_coding	-	CCDS20161.1	1	188	0	5.33	7.5	35.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002797	Ggct	ENSMUST00000203208	ENSMUSP00000145492	TRANSLATION	protein_coding	stop	-	5	124	0	3.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002797	Ggct	ENSMUST00000002874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002797	Ggct	ENSMUST00000136527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047720	Clec2m	ENSMUST00000203159	ENSMUSP00000145310	TRANSLATION	protein_coding	start	-	3	47	0	1.2	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047720	Clec2m	ENSMUST00000051283	ENSMUSP00000062024	TRANSLATION	protein_coding	-	CCDS20583.1	1	189	0	2.4	0.5	63.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000029811	Aoc1	ENSMUST00000162948	ENSMUSP00000124085	TRANSLATION	protein_coding	-	CCDS51767.1	1	756	17	4.8	0.5	573.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029811	Aoc1	ENSMUST00000161184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029811	Aoc1	ENSMUST00000167529	ENSMUSP00000128816	TRANSLATION	protein_coding	-	CCDS51767.1	5	756	17	4.8	0.5	573.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029811	Aoc1	ENSMUST00000204856	ENSMUSP00000144764	TRANSLATION	protein_coding	stop	-	3	250	1	1	0	152	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000029811	Aoc1	ENSMUST00000031835	ENSMUSP00000031835	TRANSLATION	protein_coding	-	CCDS51767.1	1	756	17	4.8	0.5	573.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030220	Arhgdib	ENSMUST00000111891	ENSMUSP00000107522	TRANSLATION	protein_coding	-	CCDS20661.1	2	200	0	5.33	12.5	253.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030220	Arhgdib	ENSMUST00000204934	ENSMUSP00000145103	TRANSLATION	protein_coding	stop	-	3	89	0	2.5	0	132	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030220	Arhgdib	ENSMUST00000154440	ENSMUSP00000120047	TRANSLATION	protein_coding	stop	-	3	50	0	1	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030220	Arhgdib	ENSMUST00000032344	ENSMUSP00000032344	TRANSLATION	protein_coding	-	CCDS20661.1	1	200	0	5.33	12.5	253.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030220	Arhgdib	ENSMUST00000111892	ENSMUSP00000107523	TRANSLATION	protein_coding	-	CCDS20661.1	1	200	0	5.33	12.5	253.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000076541	Igkv4-79	ENSMUST00000103342	ENSMUSP00000100143	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	62.6	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000006906	Stambp	ENSMUST00000206400	ENSMUSP00000145871	TRANSLATION	protein_coding	-	CCDS20280.1	1	424	8	7.65	5.1	140.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000006906	Stambp	ENSMUST00000205648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006906	Stambp	ENSMUST00000068054	ENSMUSP00000070876	TRANSLATION	protein_coding	-	CCDS20280.1	1	424	8	7.65	5.1	140.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000006906	Stambp	ENSMUST00000205369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006906	Stambp	ENSMUST00000205345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006906	Stambp	ENSMUST00000206592	ENSMUSP00000146294	TRANSLATION	protein_coding	-	CCDS20280.1	1	424	8	7.65	5.1	140.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000006906	Stambp	ENSMUST00000205829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043421	Hilpda	ENSMUST00000054445	ENSMUSP00000060791	TRANSLATION	protein_coding	-	CCDS39450.1	1	64	0	0	5.1	143.7	1	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000043421	Hilpda	ENSMUST00000115289	ENSMUSP00000110944	TRANSLATION	protein_coding	-	CCDS39450.1	3	64	0	0	5.1	143.7	1	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000030022	Adamts9	ENSMUST00000113438	ENSMUSP00000109065	TRANSLATION	protein_coding	-	-	5	1931	20	12.15	0.5	913.8	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000030022	Adamts9	ENSMUST00000167391	ENSMUSP00000126498	TRANSLATION	protein_coding	-	CCDS51855.1	5	1350	6	5.52	0.5	684.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030022	Adamts9	ENSMUST00000203690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030022	Adamts9	ENSMUST00000136751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030022	Adamts9	ENSMUST00000130314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030022	Adamts9	ENSMUST00000125490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035378	Shq1	ENSMUST00000170667	ENSMUSP00000127797	TRANSLATION	protein_coding	-	CCDS39580.2	1	569	0	5.65	1.5	229.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035378	Shq1	ENSMUST00000089245	ENSMUSP00000086656	TRANSLATION	protein_coding	-	-	1	458	0	4.69	0.5	70.6	0	-4,-5	-	-	4.08	MINOR
ENSMUSG00000035378	Shq1	ENSMUST00000113312	ENSMUSP00000108938	TRANSLATION	protein_coding	-	-	1	569	0	5.65	1.5	229.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035378	Shq1	ENSMUST00000162776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023439	Gnb3	ENSMUST00000129251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023439	Gnb3	ENSMUST00000024206	ENSMUSP00000024206	TRANSLATION	protein_coding	-	CCDS20532.1	1	340	0	7.5	14.8	153	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000023439	Gnb3	ENSMUST00000135996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023439	Gnb3	ENSMUST00000140233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071226	Cecr2	ENSMUST00000100993	ENSMUSP00000098556	TRANSLATION	protein_coding	-	-	5	1453	0	3.83	0.5	70.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071226	Cecr2	ENSMUST00000129803	ENSMUSP00000118542	TRANSLATION	protein_coding	start/stop	-	5	234	0	2.43	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071226	Cecr2	ENSMUST00000204732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071226	Cecr2	ENSMUST00000148346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071226	Cecr2	ENSMUST00000112686	ENSMUSP00000108306	TRANSLATION	protein_coding	-	CCDS51890.1	5	1425	0	3.83	0.5	70.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071226	Cecr2	ENSMUST00000135109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071226	Cecr2	ENSMUST00000124634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071226	Cecr2	ENSMUST00000143563	ENSMUSP00000116993	TRANSLATION	protein_coding	start/stop	-	2	357	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000150087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041540	Sox5	ENSMUST00000038815	ENSMUSP00000047567	TRANSLATION	protein_coding	-	CCDS39702.1	1	763	0	2	9.6	80.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041540	Sox5	ENSMUST00000124233	ENSMUSP00000114602	TRANSLATION	protein_coding	stop	-	5	135	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000142294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041540	Sox5	ENSMUST00000141102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041540	Sox5	ENSMUST00000149451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041540	Sox5	ENSMUST00000144289	ENSMUSP00000122786	TRANSLATION	protein_coding	stop	-	5	184	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000129050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041540	Sox5	ENSMUST00000170367	ENSMUSP00000133041	TRANSLATION	protein_coding	-	-	5	714	0	2	0	80.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000139478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041540	Sox5	ENSMUST00000111749	ENSMUSP00000107378	TRANSLATION	protein_coding	-	CCDS57469.1	1	679	0	2	1.5	80.3	0	-4,-5	-	-	12.174	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000111748	ENSMUSP00000107377	TRANSLATION	protein_coding	-	CCDS85183.1	1	392	0	2	1.5	80.3	0	-4,-5	-	-	12.174	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000077160	ENSMUSP00000076403	TRANSLATION	protein_coding	-	CCDS51954.2	1	715	0	2	3.9	80.3	0	-4,-5	-	-	13.011	MINOR
ENSMUSG00000041540	Sox5	ENSMUST00000111746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029867	Llcfc1	ENSMUST00000031900	ENSMUSP00000031900	TRANSLATION	protein_coding	-	CCDS20054.1	1	108	0	0	1.5	117.9	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000092035	Peg10	ENSMUST00000166678	ENSMUSP00000127306	TRANSLATION	protein_coding	-	-	5	1005	6	0	0	62.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000092035	Peg10	ENSMUST00000176204	ENSMUSP00000134963	TRANSLATION	protein_coding	-	CCDS57407.1	2	376	5	0	0.5	62.2	0	-4,-6	-	-	10.998	PRINCIPAL:2
ENSMUSG00000092035	Peg10	ENSMUST00000176551	ENSMUSP00000135076	TRANSLATION	protein_coding	-	-	2	604	1	0	0	0	0	-4,-7	-	-	1.002	MINOR
ENSMUSG00000030159	Clec1b	ENSMUST00000112079	ENSMUSP00000107710	TRANSLATION	protein_coding	-	CCDS57453.1	1	83	0	0.6	1.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030159	Clec1b	ENSMUST00000133061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030159	Clec1b	ENSMUST00000032262	ENSMUSP00000032262	TRANSLATION	protein_coding	-	CCDS20586.1	1	229	0	3.85	1.5	69.1	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000030159	Clec1b	ENSMUST00000112081	ENSMUSP00000107712	TRANSLATION	protein_coding	-	CCDS57452.1	1	197	0	3.85	1.5	69.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023274	Cd4	ENSMUST00000024044	ENSMUSP00000024044	TRANSLATION	protein_coding	-	CCDS20535.1	1	457	0	6.88	0.5	454	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000023274	Cd4	ENSMUST00000145977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023274	Cd4	ENSMUST00000130378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023274	Cd4	ENSMUST00000151594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023274	Cd4	ENSMUST00000145818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056215	Lrguk	ENSMUST00000070189	ENSMUSP00000065146	TRANSLATION	protein_coding	-	CCDS51745.1	1	820	9	9.16	1.5	143.7	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000056215	Lrguk	ENSMUST00000228187	ENSMUSP00000153993	TRANSLATION	protein_coding	-	-	-	1340	9	9.16	0.5	143.7	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000056215	Lrguk	ENSMUST00000101564	ENSMUSP00000099100	TRANSLATION	protein_coding	-	-	1	202	0	1.76	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000056215	Lrguk	ENSMUST00000141078	ENSMUSP00000117680	TRANSLATION	protein_coding	start	-	3	72	0	1.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000204528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030231	Plekha5	ENSMUST00000203774	ENSMUSP00000144832	TRANSLATION	protein_coding	-	-	1	525	7	3.75	0	65.8	0	-4,-5	-	-	10.518	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000205026	ENSMUSP00000144973	TRANSLATION	protein_coding	start	-	5	662	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000087622	ENSMUSP00000084904	TRANSLATION	protein_coding	-	CCDS39688.1	5	1269	7	5.72	0.5	124.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030231	Plekha5	ENSMUST00000203315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030231	Plekha5	ENSMUST00000203483	ENSMUSP00000145219	TRANSLATION	protein_coding	start	-	5	324	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000203955	ENSMUSP00000144821	TRANSLATION	protein_coding	start/stop	-	5	956	7	4.35	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000205255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030231	Plekha5	ENSMUST00000204755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030231	Plekha5	ENSMUST00000204876	ENSMUSP00000145336	TRANSLATION	protein_coding	-	-	5	531	7	3.75	0	65.8	0	-4,-5	-	-	10.518	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000213444	ENSMUSP00000149031	TRANSLATION	protein_coding	start	-	5	596	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000205025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030231	Plekha5	ENSMUST00000204145	ENSMUSP00000145457	TRANSLATION	nonsense_mediated_decay	-	-	5	197	0	3.06	0	59	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000204080	ENSMUSP00000144872	TRANSLATION	nonsense_mediated_decay	start	-	5	668	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000203517	ENSMUSP00000145478	TRANSLATION	protein_coding	stop	-	5	1000	7	5.72	0	124.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030231	Plekha5	ENSMUST00000203012	ENSMUSP00000145499	TRANSLATION	protein_coding	start	-	5	770	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071893	Vmn1r4	ENSMUST00000176838	ENSMUSP00000135323	TRANSLATION	protein_coding	-	CCDS20172.1	1	297	0	0	1.5	191.1	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071893	Vmn1r4	ENSMUST00000227073	ENSMUSP00000153919	TRANSLATION	protein_coding	-	CCDS20172.1	-	297	0	0	1.5	191.1	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071893	Vmn1r4	ENSMUST00000096612	ENSMUSP00000094369	TRANSLATION	protein_coding	-	CCDS20172.1	-	297	0	0	1.5	191.1	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071893	Vmn1r4	ENSMUST00000204739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096422	Igkv12-44	ENSMUST00000103367	ENSMUSP00000100168	TRANSLATION	IG_V_gene	stop	-	-	115	2	1	0	63.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000063762	Tas2r129	ENSMUST00000070991	ENSMUSP00000067640	TRANSLATION	protein_coding	-	CCDS20629.1	-	320	0	0	0.5	243.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039032	Tsga13	ENSMUST00000202703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039032	Tsga13	ENSMUST00000201230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039032	Tsga13	ENSMUST00000048580	ENSMUSP00000040894	TRANSLATION	protein_coding	-	CCDS19980.1	1	273	0	0	0.5	403.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030095	Tmem43	ENSMUST00000032183	ENSMUSP00000032183	TRANSLATION	protein_coding	-	CCDS20368.1	1	400	0	0	10.8	284	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030095	Tmem43	ENSMUST00000144246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030095	Tmem43	ENSMUST00000153179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030095	Tmem43	ENSMUST00000140246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030095	Tmem43	ENSMUST00000205954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030155	Clec2e	ENSMUST00000032258	ENSMUSP00000032258	TRANSLATION	protein_coding	-	CCDS39656.1	1	216	0	2.8	0.5	49.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000004285	Atp6v1f	ENSMUST00000149646	ENSMUSP00000145062	TRANSLATION	protein_coding	-	-	5	71	0	1	0	65.5	0	-4,-5	-	-	6.558	MINOR
ENSMUSG00000004285	Atp6v1f	ENSMUST00000143101	ENSMUSP00000116986	TRANSLATION	protein_coding	start	-	3	100	0	1	0	63.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004285	Atp6v1f	ENSMUST00000004396	ENSMUSP00000004396	TRANSLATION	protein_coding	-	CCDS19960.1	1	119	0	1.8	15.5	111.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000008540	Mgst1	ENSMUST00000118091	ENSMUSP00000112923	TRANSLATION	protein_coding	-	CCDS85177.1	2	229	8	3.83	0.5	92.4	6	-4,0	-	-	18	MINOR
ENSMUSG00000008540	Mgst1	ENSMUST00000204628	ENSMUSP00000144912	TRANSLATION	protein_coding	-	-	3	46	0	1	0	0	2	-4,-6	-	-	0.342	MINOR
ENSMUSG00000008540	Mgst1	ENSMUST00000120939	ENSMUSP00000112646	TRANSLATION	protein_coding	-	-	3	102	0	2.08	0	0	2	-4,-6	-	-	2.502	MINOR
ENSMUSG00000008540	Mgst1	ENSMUST00000140932	ENSMUSP00000145306	TRANSLATION	protein_coding	-	-	3	51	5	1	0	33.6	3	-4,-1	-	-	6.276	MINOR
ENSMUSG00000008540	Mgst1	ENSMUST00000008684	ENSMUSP00000008684	TRANSLATION	protein_coding	-	CCDS20668.1	1	155	8	3.83	10.8	92.4	6	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000008540	Mgst1	ENSMUST00000125810	ENSMUSP00000114222	TRANSLATION	protein_coding	stop	-	5	91	0	1.33	0	0	2	-2,-3	-	-	-1	MINOR
ENSMUSG00000008540	Mgst1	ENSMUST00000120302	ENSMUSP00000113257	TRANSLATION	protein_coding	-	CCDS20668.1	3	155	8	3.83	10.8	92.4	6	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000008540	Mgst1	ENSMUST00000120230	ENSMUSP00000113859	TRANSLATION	protein_coding	-	CCDS20668.1	3	155	8	3.83	10.8	92.4	6	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000044162	Tnip3	ENSMUST00000204438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044162	Tnip3	ENSMUST00000131482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044162	Tnip3	ENSMUST00000212375	ENSMUSP00000148845	TRANSLATION	protein_coding	-	-	5	279	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000044162	Tnip3	ENSMUST00000114236	ENSMUSP00000109874	TRANSLATION	protein_coding	-	CCDS39501.1	1	208	0	0	1.5	0	0	-3,-4	-	-	0	PRINCIPAL:2
ENSMUSG00000044162	Tnip3	ENSMUST00000204241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044162	Tnip3	ENSMUST00000205009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044162	Tnip3	ENSMUST00000203613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044162	Tnip3	ENSMUST00000212402	ENSMUSP00000148446	TRANSLATION	protein_coding	-	-	5	268	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038527	C1rl	ENSMUST00000049124	ENSMUSP00000042883	TRANSLATION	protein_coding	-	CCDS20520.1	1	482	6	2.5	0.5	196	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053470	Kdm3a	ENSMUST00000167220	ENSMUSP00000128789	TRANSLATION	protein_coding	-	CCDS20233.1	1	1323	7	8.35	1.5	63.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053470	Kdm3a	ENSMUST00000205505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053470	Kdm3a	ENSMUST00000205289	ENSMUSP00000145719	TRANSLATION	protein_coding	stop	-	1	834	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053470	Kdm3a	ENSMUST00000206704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053470	Kdm3a	ENSMUST00000206597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053470	Kdm3a	ENSMUST00000206582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053470	Kdm3a	ENSMUST00000206916	ENSMUSP00000145992	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053470	Kdm3a	ENSMUST00000065509	ENSMUSP00000065716	TRANSLATION	protein_coding	-	CCDS20233.1	1	1323	7	8.35	1.5	63.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053470	Kdm3a	ENSMUST00000205470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053470	Kdm3a	ENSMUST00000206798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053470	Kdm3a	ENSMUST00000206357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053470	Kdm3a	ENSMUST00000207023	ENSMUSP00000145959	TRANSLATION	protein_coding	-	CCDS20233.1	5	1323	7	8.35	1.5	63.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053470	Kdm3a	ENSMUST00000206050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053470	Kdm3a	ENSMUST00000206339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030298	Sec13	ENSMUST00000032440	ENSMUSP00000032440	TRANSLATION	protein_coding	-	CCDS39596.1	1	322	0	7.5	19.5	81.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030298	Sec13	ENSMUST00000138204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030298	Sec13	ENSMUST00000145979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030298	Sec13	ENSMUST00000205135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029629	Phf14	ENSMUST00000214543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029629	Phf14	ENSMUST00000115510	ENSMUSP00000111172	TRANSLATION	protein_coding	-	CCDS39428.1	1	881	26	4.52	1.5	176.9	0	-4,-2	-	-	10.242	MINOR
ENSMUSG00000029629	Phf14	ENSMUST00000203222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029629	Phf14	ENSMUST00000115511	ENSMUSP00000111173	TRANSLATION	protein_coding	-	CCDS51720.1	5	941	32	5.22	1.5	216.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000029629	Phf14	ENSMUST00000203045	ENSMUSP00000145527	TRANSLATION	nonsense_mediated_decay	start	-	3	69	2	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000029629	Phf14	ENSMUST00000204565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029629	Phf14	ENSMUST00000090632	ENSMUSP00000088126	TRANSLATION	protein_coding	-	-	1	878	26	4.32	1.5	176.9	0	-4,-2	-	-	9.84	MINOR
ENSMUSG00000029629	Phf14	ENSMUST00000204150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029629	Phf14	ENSMUST00000155037	ENSMUSP00000144981	TRANSLATION	protein_coding	stop	-	2	90	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000029629	Phf14	ENSMUST00000133776	ENSMUSP00000115485	TRANSLATION	protein_coding	start/stop	-	3	243	16	3.02	0	136.6	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000029629	Phf14	ENSMUST00000203459	ENSMUSP00000145355	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030157	Clec2d	ENSMUST00000032260	ENSMUSP00000032260	TRANSLATION	protein_coding	-	CCDS20581.1	1	207	0	3	0.5	49.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000029706	Pax4	ENSMUST00000031718	ENSMUSP00000031718	TRANSLATION	protein_coding	-	CCDS39447.1	1	349	0	4.7	1.5	257.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000029706	Pax4	ENSMUST00000174036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029706	Pax4	ENSMUST00000174423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029706	Pax4	ENSMUST00000174194	ENSMUSP00000134470	TRANSLATION	protein_coding	-	-	5	307	0	4.1	1	233.7	0	-4,-5	-	-	9.384	MINOR
ENSMUSG00000029706	Pax4	ENSMUST00000171089	ENSMUSP00000126000	TRANSLATION	protein_coding	-	CCDS51731.1	1	335	0	4.7	0.5	257.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000029706	Pax4	ENSMUST00000164519	ENSMUSP00000131301	TRANSLATION	protein_coding	-	CCDS51732.1	1	336	0	4.7	0.5	257.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025889	Snca	ENSMUST00000203177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025889	Snca	ENSMUST00000163779	ENSMUSP00000126067	TRANSLATION	protein_coding	-	CCDS20201.1	1	140	0	3.58	7.5	179.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025889	Snca	ENSMUST00000114268	ENSMUSP00000109907	TRANSLATION	protein_coding	-	CCDS20201.1	1	140	0	3.58	7.5	179.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025889	Snca	ENSMUST00000204586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029676	Pot1a	ENSMUST00000115329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029676	Pot1a	ENSMUST00000115330	ENSMUSP00000110986	TRANSLATION	protein_coding	-	CCDS39442.1	1	640	0	12.55	1.5	246.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029676	Pot1a	ENSMUST00000156985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029676	Pot1a	ENSMUST00000115327	ENSMUSP00000110982	TRANSLATION	protein_coding	-	-	1	325	0	5.1	0	246.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000029676	Pot1a	ENSMUST00000136089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029676	Pot1a	ENSMUST00000134339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029676	Pot1a	ENSMUST00000151186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029676	Pot1a	ENSMUST00000147970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029676	Pot1a	ENSMUST00000166445	ENSMUSP00000131928	TRANSLATION	protein_coding	-	CCDS39442.1	5	640	0	12.55	1.5	246.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047420	Fam180a	ENSMUST00000051176	ENSMUSP00000051206	TRANSLATION	protein_coding	-	CCDS20001.1	1	173	0	0	2.7	191.4	0	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000029552	Tes	ENSMUST00000115467	ENSMUSP00000111127	TRANSLATION	protein_coding	-	CCDS39429.1	1	419	23	2.6	5.1	239.6	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000029552	Tes	ENSMUST00000154266	ENSMUSP00000118791	TRANSLATION	protein_coding	stop	-	5	79	0	0	0	91	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029552	Tes	ENSMUST00000121170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029552	Tes	ENSMUST00000200690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029552	Tes	ENSMUST00000076654	ENSMUSP00000075950	TRANSLATION	protein_coding	-	-	1	410	23	2.6	5.1	239.6	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000067599	Klra7	ENSMUST00000088011	ENSMUSP00000085326	TRANSLATION	protein_coding	-	CCDS39668.1	1	267	3	4	1.5	259.2	1	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000067599	Klra7	ENSMUST00000112013	ENSMUSP00000107644	TRANSLATION	protein_coding	-	CCDS51928.1	5	280	3	4	0.5	250.8	1	-4,-7	-	-	14.496	ALTERNATIVE:2
ENSMUSG00000067599	Klra7	ENSMUST00000049304	ENSMUSP00000037917	TRANSLATION	protein_coding	-	CCDS39668.1	1	267	3	4	1.5	259.2	1	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000067599	Klra7	ENSMUST00000032286	ENSMUSP00000032286	TRANSLATION	protein_coding	-	CCDS51928.1	1	280	3	4	0.5	250.8	1	-4,-7	-	-	14.496	ALTERNATIVE:2
ENSMUSG00000030049	Gkn2	ENSMUST00000032128	ENSMUSP00000032128	TRANSLATION	protein_coding	-	CCDS39546.1	1	184	0	0	2.7	86	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000076596	Igkv3-10	ENSMUST00000196940	ENSMUSP00000143628	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	73.5	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076596	Igkv3-10	ENSMUST00000103397	ENSMUSP00000100198	TRANSLATION	IG_V_gene	stop	-	-	118	0	1.5	0	73.5	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000039419	Cntnap2	ENSMUST00000114641	ENSMUSP00000110288	TRANSLATION	protein_coding	-	CCDS39475.1	1	1332	11	10.08	4.1	446.8	1	4,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000039419	Cntnap2	ENSMUST00000150737	ENSMUSP00000142656	TRANSLATION	protein_coding	stop	-	3	79	4	0.64	0	24.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039419	Cntnap2	ENSMUST00000060839	ENSMUSP00000056299	TRANSLATION	protein_coding	-	CCDS20094.1	1	108	0	0	0.5	0	1	-4,-6	-	-	0	MINOR
ENSMUSG00000039419	Cntnap2	ENSMUST00000199100	ENSMUSP00000143528	TRANSLATION	protein_coding	-	CCDS20094.1	1	108	0	0	0.5	0	1	-4,-6	-	-	0	MINOR
ENSMUSG00000039419	Cntnap2	ENSMUST00000207647	ENSMUSP00000147145	TRANSLATION	protein_coding	stop	-	5	119	0	1.36	0	54.2	0	4,-3	-	-	-1	MINOR
ENSMUSG00000039419	Cntnap2	ENSMUST00000196561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062694	Cav3	ENSMUST00000075477	ENSMUSP00000074922	TRANSLATION	protein_coding	-	CCDS20406.1	1	151	0	0	10.3	196	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000068748	Ptprz1	ENSMUST00000201827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068748	Ptprz1	ENSMUST00000200769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068748	Ptprz1	ENSMUST00000090568	ENSMUSP00000088056	TRANSLATION	protein_coding	-	CCDS39437.1	1	2312	13	21.13	0.5	771.2	0	1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000068748	Ptprz1	ENSMUST00000202579	ENSMUSP00000144605	TRANSLATION	protein_coding	-	-	1	1612	2	6.5	0	287.6	0	1,-2	-	-	0	MINOR
ENSMUSG00000068748	Ptprz1	ENSMUST00000202102	ENSMUSP00000143902	TRANSLATION	protein_coding	-	CCDS80493.1	1	1463	13	21.13	1.5	771.2	0	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000068748	Ptprz1	ENSMUST00000202341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094586	Vmn1r41	ENSMUST00000226562	ENSMUSP00000154018	TRANSLATION	protein_coding	-	-	-	81	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000094586	Vmn1r41	ENSMUST00000227630	ENSMUSP00000153916	TRANSLATION	protein_coding	-	-	-	96	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000094586	Vmn1r41	ENSMUST00000204949	ENSMUSP00000145199	TRANSLATION	protein_coding	-	CCDS57438.1	2	311	0	0	1.5	452.3	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094586	Vmn1r41	ENSMUST00000226337	ENSMUSP00000153965	TRANSLATION	protein_coding	-	-	-	81	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000094586	Vmn1r41	ENSMUST00000227039	ENSMUSP00000154038	TRANSLATION	protein_coding	-	-	-	96	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000094586	Vmn1r41	ENSMUST00000228068	ENSMUSP00000154326	TRANSLATION	protein_coding	-	CCDS57438.1	-	311	0	0	1.5	452.3	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000072878	1700123L14Rik	ENSMUST00000090061	ENSMUSP00000087515	TRANSLATION	protein_coding	-	-	-	440	0	0.6	0	96.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030309	Caprin2	ENSMUST00000127941	ENSMUSP00000145114	TRANSLATION	protein_coding	start	-	3	172	0	0	0	197.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030309	Caprin2	ENSMUST00000122909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030309	Caprin2	ENSMUST00000154971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030309	Caprin2	ENSMUST00000139914	ENSMUSP00000121685	TRANSLATION	protein_coding	stop	-	3	131	0	0.45	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030309	Caprin2	ENSMUST00000132535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030309	Caprin2	ENSMUST00000204564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030309	Caprin2	ENSMUST00000151640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030309	Caprin2	ENSMUST00000204942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030309	Caprin2	ENSMUST00000203014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030309	Caprin2	ENSMUST00000111569	ENSMUSP00000107195	TRANSLATION	protein_coding	-	CCDS39720.1	1	1031	0	4.9	0.5	503.4	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000030309	Caprin2	ENSMUST00000072324	ENSMUSP00000072165	TRANSLATION	protein_coding	-	-	5	812	0	4.9	0.5	503.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000071112	Spx	ENSMUST00000141548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071112	Spx	ENSMUST00000126521	ENSMUSP00000118062	TRANSLATION	protein_coding	-	CCDS85181.1	5	118	0	0	7.5	156.8	0	2,-2	-	-	8.682	PRINCIPAL:1
ENSMUSG00000071112	Spx	ENSMUST00000211094	ENSMUSP00000147302	TRANSLATION	protein_coding	-	-	5	116	0	0	3.9	162.1	0	2,-2	-	-	7.338	MINOR
ENSMUSG00000071112	Spx	ENSMUST00000123209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048776	Pthlh	ENSMUST00000204197	ENSMUSP00000145509	TRANSLATION	protein_coding	-	CCDS39717.1	5	175	0	1	1.5	116	0	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000048776	Pthlh	ENSMUST00000052296	ENSMUSP00000051433	TRANSLATION	protein_coding	-	CCDS39717.1	1	175	0	1	1.5	116	0	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000094117	Igkv3-12	ENSMUST00000103396	ENSMUSP00000100197	TRANSLATION	IG_V_gene	stop	-	-	119	0	1.5	0	74.2	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000030282	Cmas	ENSMUST00000133248	ENSMUSP00000144875	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	1	0	50.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030282	Cmas	ENSMUST00000032419	ENSMUSP00000032419	TRANSLATION	protein_coding	-	CCDS20687.1	1	432	8	8	7.5	220.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030282	Cmas	ENSMUST00000204147	ENSMUSP00000145460	TRANSLATION	nonsense_mediated_decay	start	-	3	115	0	1.06	0	52	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030282	Cmas	ENSMUST00000146643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030282	Cmas	ENSMUST00000144920	ENSMUSP00000145392	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	1	0	50.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091620	Vmn2r23	ENSMUST00000233414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091620	Vmn2r23	ENSMUST00000233267	ENSMUSP00000156872	TRANSLATION	nonsense_mediated_decay	-	-	-	188	5	0.88	0	40.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091620	Vmn2r23	ENSMUST00000233008	ENSMUSP00000156548	TRANSLATION	nonsense_mediated_decay	-	-	-	180	5	1.078	0	41.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091620	Vmn2r23	ENSMUST00000172391	ENSMUSP00000126682	TRANSLATION	protein_coding	-	CCDS51901.1	5	849	5	3.14	0.5	390.5	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000091620	Vmn2r23	ENSMUST00000233395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041377	Ninj2	ENSMUST00000112711	ENSMUSP00000108331	TRANSLATION	protein_coding	-	CCDS39612.1	1	143	0	0	1.5	109	2	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000041377	Ninj2	ENSMUST00000035244	ENSMUSP00000046306	TRANSLATION	protein_coding	-	CCDS85148.1	2	133	0	0	0.5	109	2	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000059689	Zfp637	ENSMUST00000112858	ENSMUSP00000108479	TRANSLATION	protein_coding	-	-	2	33	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000134526	ENSMUSP00000115733	TRANSLATION	protein_coding	stop	-	5	153	11	1	0	80	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000112859	ENSMUSP00000108480	TRANSLATION	protein_coding	-	-	2	33	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000132644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059689	Zfp637	ENSMUST00000136889	ENSMUSP00000123106	TRANSLATION	protein_coding	stop	-	3	153	11	1	0	80	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000137224	ENSMUSP00000120884	TRANSLATION	protein_coding	stop	-	1	202	16	2	0	111.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000112860	ENSMUSP00000108481	TRANSLATION	protein_coding	-	CCDS85139.1	1	286	27	3	4.1	162.1	0	-4,-7	-	-	19.431	MINOR
ENSMUSG00000059689	Zfp637	ENSMUST00000127593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059689	Zfp637	ENSMUST00000164472	ENSMUSP00000130144	TRANSLATION	protein_coding	-	CCDS39607.1	1	272	27	3	7.5	162.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059689	Zfp637	ENSMUST00000112861	ENSMUSP00000108482	TRANSLATION	protein_coding	-	CCDS39607.1	2	272	27	3	7.5	162.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059689	Zfp637	ENSMUST00000223041	ENSMUSP00000152569	TRANSLATION	protein_coding	-	CCDS85139.1	1	286	27	3	4.1	162.1	0	-4,-7	-	-	19.431	MINOR
ENSMUSG00000095753	Igkv4-53	ENSMUST00000166380	ENSMUSP00000128717	TRANSLATION	IG_V_gene	start/stop	-	-	97	2	1	0	55.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095753	Igkv4-53	ENSMUST00000198328	ENSMUSP00000143120	TRANSLATION	IG_V_gene	stop	-	-	119	2	1.5	0	55.5	0	-1,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000114982	Vmn1r14	ENSMUST00000227574	ENSMUSP00000153807	TRANSLATION	protein_coding	-	-	-	259	0	0	0	179.6	7	-3,-5	-	-	5.412	MINOR
ENSMUSG00000114982	Vmn1r14	ENSMUST00000227884	ENSMUSP00000154520	TRANSLATION	protein_coding	-	CCDS20177.1	-	303	0	0	0.5	189.4	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000114982	Vmn1r14	ENSMUST00000227209	ENSMUSP00000154267	TRANSLATION	protein_coding	-	-	-	259	0	0	0	179.6	7	-3,-5	-	-	5.412	MINOR
ENSMUSG00000114982	Vmn1r14	ENSMUST00000177435	ENSMUSP00000135207	TRANSLATION	protein_coding	-	CCDS20177.1	-	303	0	0	0.5	189.4	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000114982	Vmn1r14	ENSMUST00000227768	ENSMUSP00000154375	TRANSLATION	protein_coding	-	CCDS20177.1	-	303	0	0	0.5	189.4	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025701	Alox5	ENSMUST00000026795	ENSMUSP00000026795	TRANSLATION	protein_coding	-	CCDS20452.1	1	674	8	14.58	13.8	90.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025701	Alox5	ENSMUST00000167447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025701	Alox5	ENSMUST00000170186	ENSMUSP00000130424	TRANSLATION	protein_coding	-	-	5	642	8	13.58	1.2	90.3	0	-4,-6	-	-	16.066	MINOR
ENSMUSG00000025701	Alox5	ENSMUST00000167174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025701	Alox5	ENSMUST00000167585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025701	Alox5	ENSMUST00000169625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025701	Alox5	ENSMUST00000164547	ENSMUSP00000130780	TRANSLATION	protein_coding	-	-	5	617	7	13.58	1.2	90.3	0	-4,-6	-	-	15.316	MINOR
ENSMUSG00000025701	Alox5	ENSMUST00000203722	ENSMUSP00000145367	TRANSLATION	nonsense_mediated_decay	-	-	5	434	4	8.764	0	90.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030035	Wbp1	ENSMUST00000032111	ENSMUSP00000032111	TRANSLATION	protein_coding	-	CCDS39529.1	1	304	0	0	3.9	145.3	2	-4,-2	-	-	7.414	PRINCIPAL:4
ENSMUSG00000030035	Wbp1	ENSMUST00000142493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030035	Wbp1	ENSMUST00000113936	ENSMUSP00000109569	TRANSLATION	protein_coding	-	CCDS39528.1	1	269	0	0	5.1	145.3	2	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000030035	Wbp1	ENSMUST00000123394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030035	Wbp1	ENSMUST00000205023	ENSMUSP00000145178	TRANSLATION	protein_coding	-	-	-	28	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000030035	Wbp1	ENSMUST00000151393	ENSMUSP00000145130	TRANSLATION	protein_coding	-	-	3	195	0	0	0	34.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000030035	Wbp1	ENSMUST00000131936	ENSMUSP00000144735	TRANSLATION	protein_coding	start/stop	-	3	133	0	0	0	99.6	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000030035	Wbp1	ENSMUST00000131939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030035	Wbp1	ENSMUST00000146328	ENSMUSP00000122900	TRANSLATION	protein_coding	stop	-	1	288	0	0	0	145.3	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000003476	Crhr2	ENSMUST00000003568	ENSMUSP00000003568	TRANSLATION	protein_coding	-	CCDS20162.1	1	430	0	8.34	1.5	326.6	10	2,-2	-	-	11.829	MINOR
ENSMUSG00000003476	Crhr2	ENSMUST00000164012	ENSMUSP00000126673	TRANSLATION	protein_coding	-	-	1	420	0	8.14	0	326.6	10	2,-2	-	-	11.202	MINOR
ENSMUSG00000003476	Crhr2	ENSMUST00000114374	ENSMUSP00000110015	TRANSLATION	protein_coding	-	-	5	410	0	8.34	7.5	326.6	10	1,-2	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000003476	Crhr2	ENSMUST00000212633	ENSMUSP00000148408	TRANSLATION	protein_coding	-	CCDS85053.1	1	431	0	8.54	1.5	326.6	10	2,-2	-	-	12.231	MINOR
ENSMUSG00000003476	Crhr2	ENSMUST00000213026	ENSMUSP00000148297	TRANSLATION	protein_coding	-	CCDS85052.1	1	411	0	8.54	7.5	326.6	10	1,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000003476	Crhr2	ENSMUST00000095898	ENSMUSP00000093586	TRANSLATION	nonsense_mediated_decay	-	-	2	143	0	2.75	0	68.7	0	1,-2	-	-	-1	MINOR
ENSMUSG00000003476	Crhr2	ENSMUST00000166954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003476	Crhr2	ENSMUST00000204117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003476	Crhr2	ENSMUST00000169777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029822	Osbpl3	ENSMUST00000203907	ENSMUSP00000145249	TRANSLATION	protein_coding	start/stop	-	3	246	2	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029822	Osbpl3	ENSMUST00000146341	ENSMUSP00000114472	TRANSLATION	protein_coding	stop	-	3	144	11	1.844	0	36.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029822	Osbpl3	ENSMUST00000133141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029822	Osbpl3	ENSMUST00000141466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029822	Osbpl3	ENSMUST00000154333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029822	Osbpl3	ENSMUST00000114468	ENSMUSP00000110112	TRANSLATION	protein_coding	-	CCDS39489.1	1	855	11	7.384	5.1	482.8	0	-4,-7	-	-	19.893	MINOR
ENSMUSG00000029822	Osbpl3	ENSMUST00000071728	ENSMUSP00000071643	TRANSLATION	protein_coding	-	CCDS51771.1	1	819	11	7.384	5.1	482.8	0	-4,-7	-	-	19.893	MINOR
ENSMUSG00000029822	Osbpl3	ENSMUST00000090019	ENSMUSP00000087473	TRANSLATION	protein_coding	-	CCDS85046.1	5	886	11	7.384	7.5	482.8	0	-4,-7	-	-	21	PRINCIPAL:2
ENSMUSG00000029822	Osbpl3	ENSMUST00000136926	ENSMUSP00000144934	TRANSLATION	protein_coding	stop	-	3	76	8	0.824	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029822	Osbpl3	ENSMUST00000114466	ENSMUSP00000110110	TRANSLATION	protein_coding	-	-	5	850	11	7.384	7.5	482.8	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000030236	Slco1b2	ENSMUST00000042812	ENSMUSP00000044326	TRANSLATION	protein_coding	-	CCDS20678.1	1	689	0	0	0.5	623.7	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030236	Slco1b2	ENSMUST00000203597	ENSMUSP00000144747	TRANSLATION	protein_coding	-	-	5	654	0	0	0	592.5	10	-4,-7	-	-	4.128	MINOR
ENSMUSG00000030236	Slco1b2	ENSMUST00000162675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030236	Slco1b2	ENSMUST00000160179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029802	Abcg2	ENSMUST00000134426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029802	Abcg2	ENSMUST00000204948	ENSMUSP00000144876	TRANSLATION	protein_coding	stop	-	2	172	9	3.125	0	38.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000031822	ENSMUSP00000031822	TRANSLATION	protein_coding	-	CCDS20195.1	1	657	9	9.054	2.7	210	7	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029802	Abcg2	ENSMUST00000145685	ENSMUSP00000138703	TRANSLATION	nonsense_mediated_decay	start	-	5	130	0	0.805	0	39.4	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000203146	ENSMUSP00000145435	TRANSLATION	protein_coding	stop	-	5	159	9	3.039	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000145161	ENSMUSP00000122924	TRANSLATION	protein_coding	stop	-	2	172	9	3.125	0	38.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000114294	ENSMUSP00000109933	TRANSLATION	protein_coding	-	CCDS20195.1	5	657	9	9.054	2.7	210	7	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000029802	Abcg2	ENSMUST00000204924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029802	Abcg2	ENSMUST00000143752	ENSMUSP00000138608	TRANSLATION	nonsense_mediated_decay	-	-	5	576	9	7.89	0	175.5	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000143447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029802	Abcg2	ENSMUST00000148008	ENSMUSP00000114454	TRANSLATION	protein_coding	stop	-	3	50	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000147213	ENSMUSP00000120940	TRANSLATION	protein_coding	stop	-	5	115	9	1.47	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000029802	Abcg2	ENSMUST00000124542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057691	Zfp746	ENSMUST00000073124	ENSMUSP00000072868	TRANSLATION	protein_coding	-	CCDS51762.1	1	652	15	0.36	1.5	158.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000057691	Zfp746	ENSMUST00000203890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057691	Zfp746	ENSMUST00000203033	ENSMUSP00000144746	TRANSLATION	protein_coding	start/stop	-	5	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057691	Zfp746	ENSMUST00000203994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057691	Zfp746	ENSMUST00000203609	ENSMUSP00000145506	TRANSLATION	protein_coding	-	CCDS85036.1	5	651	15	0.36	1.5	158.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000057691	Zfp746	ENSMUST00000204771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042213	Zfand4	ENSMUST00000221069	ENSMUSP00000152313	TRANSLATION	protein_coding	-	-	3	128	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042213	Zfand4	ENSMUST00000221824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042213	Zfand4	ENSMUST00000221239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042213	Zfand4	ENSMUST00000223495	ENSMUSP00000152064	TRANSLATION	protein_coding	-	-	5	232	0	2.18	0	63.3	0	-4,-7	-	-	5.802	MINOR
ENSMUSG00000042213	Zfand4	ENSMUST00000222819	ENSMUSP00000152213	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042213	Zfand4	ENSMUST00000036503	ENSMUSP00000040057	TRANSLATION	protein_coding	-	-	5	739	8	4.18	1.5	99.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000042213	Zfand4	ENSMUST00000112900	ENSMUSP00000108521	TRANSLATION	protein_coding	-	-	5	758	8	4.18	0	99.9	0	-4,-7	-	-	18	PRINCIPAL:5
ENSMUSG00000042213	Zfand4	ENSMUST00000220845	ENSMUSP00000152078	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042213	Zfand4	ENSMUST00000222494	ENSMUSP00000152710	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042213	Zfand4	ENSMUST00000222144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030351	Tspan11	ENSMUST00000149801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030351	Tspan11	ENSMUST00000032501	ENSMUSP00000032501	TRANSLATION	protein_coding	-	CCDS20567.1	1	253	0	2.465	7.5	173.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095794	Igkv6-17	ENSMUST00000103391	ENSMUSP00000100192	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	56	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000048489	Depp1	ENSMUST00000067354	ENSMUSP00000070203	TRANSLATION	protein_coding	-	CCDS51882.1	1	205	0	0	1.5	255.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000048489	Depp1	ENSMUST00000178241	ENSMUSP00000136165	TRANSLATION	protein_coding	-	CCDS51882.1	1	205	0	0	1.5	255.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000048489	Depp1	ENSMUST00000204555	ENSMUSP00000145125	TRANSLATION	protein_coding	stop	-	5	70	0	0	0	79.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030325	Klrb1c	ENSMUST00000174404	ENSMUSP00000134504	TRANSLATION	protein_coding	-	CCDS51919.1	1	271	0	3.364	0.5	70.9	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030325	Klrb1c	ENSMUST00000167691	ENSMUSP00000127297	TRANSLATION	protein_coding	-	CCDS39654.2	1	268	0	3.364	0.5	70.9	1	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000030325	Klrb1c	ENSMUST00000172601	ENSMUSP00000134184	TRANSLATION	protein_coding	start	-	1	219	0	3.364	0	70.9	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000030325	Klrb1c	ENSMUST00000174865	ENSMUSP00000134055	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000054422	Fabp1	ENSMUST00000067492	ENSMUSP00000064655	TRANSLATION	protein_coding	-	CCDS20226.1	1	127	0	3.25	15.7	104.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000029829	Tmem213	ENSMUST00000031851	ENSMUSP00000031851	TRANSLATION	protein_coding	-	CCDS51748.1	1	127	0	0	1.5	139.7	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000042129	Rassf4	ENSMUST00000204203	ENSMUSP00000145076	TRANSLATION	protein_coding	stop	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042129	Rassf4	ENSMUST00000204576	ENSMUSP00000145394	TRANSLATION	protein_coding	stop	-	5	80	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042129	Rassf4	ENSMUST00000035842	ENSMUSP00000048267	TRANSLATION	protein_coding	-	CCDS20460.1	1	322	0	1.68	1.5	98.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042129	Rassf4	ENSMUST00000203029	ENSMUSP00000144786	TRANSLATION	protein_coding	-	-	1	303	0	1.68	0	85.6	0	-4,-5	-	-	11.196	ALTERNATIVE:2
ENSMUSG00000042129	Rassf4	ENSMUST00000203477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042129	Rassf4	ENSMUST00000204313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042129	Rassf4	ENSMUST00000203634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057604	Lmcd1	ENSMUST00000032376	ENSMUSP00000032376	TRANSLATION	protein_coding	-	CCDS20403.1	1	365	13	1.44	7.5	205	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030111	A2m	ENSMUST00000032203	ENSMUSP00000032203	TRANSLATION	protein_coding	-	CCDS39617.1	1	1474	2	30.055	0.5	704.4	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030111	A2m	ENSMUST00000204850	ENSMUSP00000144862	TRANSLATION	protein_coding	stop	-	3	35	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030111	A2m	ENSMUST00000203413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090346	Vmn1r5	ENSMUST00000228276	ENSMUSP00000154081	TRANSLATION	protein_coding	-	CCDS51791.1	-	315	0	0	0.5	173.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090346	Vmn1r5	ENSMUST00000164307	ENSMUSP00000131092	TRANSLATION	protein_coding	-	CCDS51791.1	-	315	0	0	0.5	173.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090346	Vmn1r5	ENSMUST00000226130	ENSMUSP00000153712	TRANSLATION	protein_coding	-	CCDS51791.1	-	315	0	0	0.5	173.3	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095577	Gm6619	ENSMUST00000159229	ENSMUSP00000123949	TRANSLATION	protein_coding	-	CCDS85173.1	1	175	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000000440	Pparg	ENSMUST00000204305	ENSMUSP00000145083	TRANSLATION	protein_coding	stop	-	3	96	0	0.75	0	116	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000440	Pparg	ENSMUST00000203732	ENSMUSP00000145525	TRANSLATION	protein_coding	-	CCDS51876.1	1	475	8	6.5	13.6	268.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000000440	Pparg	ENSMUST00000205213	ENSMUSP00000144975	TRANSLATION	protein_coding	stop	-	3	222	8	3.75	0	212.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000440	Pparg	ENSMUST00000000450	ENSMUSP00000000450	TRANSLATION	protein_coding	-	CCDS20439.1	1	505	8	6.5	6.3	268.5	0	-4,-5	-	-	19.684	MINOR
ENSMUSG00000000440	Pparg	ENSMUST00000203308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000440	Pparg	ENSMUST00000203896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000440	Pparg	ENSMUST00000171644	ENSMUSP00000131962	TRANSLATION	protein_coding	-	CCDS51876.1	1	475	8	6.5	13.6	268.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000096336	Igkv1-135	ENSMUST00000103303	ENSMUSP00000100104	TRANSLATION	IG_V_gene	stop	-	-	120	0	1.5	0	55	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000004266	Ptpn6	ENSMUST00000171549	ENSMUSP00000129124	TRANSLATION	protein_coding	-	CCDS51908.1	1	597	11	16.41	6.5	422.8	0	-4,-7	-	-	20.427	ALTERNATIVE:1
ENSMUSG00000004266	Ptpn6	ENSMUST00000173315	ENSMUSP00000134274	TRANSLATION	protein_coding	start	-	2	101	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004266	Ptpn6	ENSMUST00000174265	ENSMUSP00000133991	TRANSLATION	protein_coding	-	-	5	556	11	15.08	0	368.4	0	-4,-5	-	-	12.078	MINOR
ENSMUSG00000004266	Ptpn6	ENSMUST00000172770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004266	Ptpn6	ENSMUST00000112484	ENSMUSP00000108103	TRANSLATION	protein_coding	-	CCDS39628.1	1	595	11	16.41	7.8	422.8	0	-4,-7	-	-	21	PRINCIPAL:3
ENSMUSG00000004266	Ptpn6	ENSMUST00000173228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004266	Ptpn6	ENSMUST00000172690	ENSMUSP00000134638	TRANSLATION	protein_coding	start/stop	-	1	45	0	1.33	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004266	Ptpn6	ENSMUST00000004377	ENSMUSP00000004377	TRANSLATION	protein_coding	-	CCDS51908.1	1	597	11	16.41	6.5	422.8	0	-4,-7	-	-	20.427	ALTERNATIVE:1
ENSMUSG00000004266	Ptpn6	ENSMUST00000173647	ENSMUSP00000133747	TRANSLATION	protein_coding	stop	-	5	67	0	2	0	33.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004266	Ptpn6	ENSMUST00000172613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004266	Ptpn6	ENSMUST00000174787	ENSMUSP00000133429	TRANSLATION	protein_coding	start/stop	-	1	40	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000067541	A630073D07Rik	ENSMUST00000203888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067541	A630073D07Rik	ENSMUST00000091791	ENSMUSP00000089395	TRANSLATION	protein_coding	-	CCDS51932.1	3	100	0	0	0.5	34.4	0	4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000067541	A630073D07Rik	ENSMUST00000205081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030166	Rad52	ENSMUST00000162205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030166	Rad52	ENSMUST00000160558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000162590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000204319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000161860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000161045	ENSMUSP00000125559	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030166	Rad52	ENSMUST00000159356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030166	Rad52	ENSMUST00000162255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030166	Rad52	ENSMUST00000032269	ENSMUSP00000032269	TRANSLATION	protein_coding	-	CCDS20477.1	1	419	0	5.65	0.5	163	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000030166	Rad52	ENSMUST00000162009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000161816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000162461	ENSMUSP00000125502	TRANSLATION	protein_coding	-	CCDS51887.1	1	420	0	5.65	0.5	163	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030166	Rad52	ENSMUST00000160877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030166	Rad52	ENSMUST00000159291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076480	Trbv29	ENSMUST00000103281	ENSMUSP00000100097	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	41.5	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000025823	Pdia4	ENSMUST00000077290	ENSMUSP00000076521	TRANSLATION	protein_coding	-	CCDS20097.1	1	641	12	9	4.1	384.7	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000025823	Pdia4	ENSMUST00000204029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030291	Med21	ENSMUST00000134387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030291	Med21	ENSMUST00000032429	ENSMUSP00000032429	TRANSLATION	protein_coding	-	CCDS20700.1	1	144	0	1.58	17.3	94.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030291	Med21	ENSMUST00000203416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030291	Med21	ENSMUST00000111650	ENSMUSP00000107277	TRANSLATION	protein_coding	-	-	2	90	0	1.58	0	69.7	0	-4,-5	-	-	10.428	MINOR
ENSMUSG00000030291	Med21	ENSMUST00000075077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030291	Med21	ENSMUST00000125539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030291	Med21	ENSMUST00000204040	ENSMUSP00000145512	TRANSLATION	nonsense_mediated_decay	-	-	3	144	0	1.58	17.3	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000205109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000130967	ENSMUSP00000118558	TRANSLATION	protein_coding	-	CCDS51833.1	1	285	0	7.094	0.5	196.7	0	-4,-5	-	-	7.428	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000134142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000147104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071337	Tia1	ENSMUST00000148728	ENSMUSP00000144857	TRANSLATION	nonsense_mediated_decay	-	-	5	133	0	3.514	0	105.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000126404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000203206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000149270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000123267	ENSMUSP00000145407	TRANSLATION	nonsense_mediated_decay	start	-	3	105	0	2.5	0	66.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000123002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000095752	ENSMUSP00000093424	TRANSLATION	protein_coding	-	-	5	375	0	8.094	8.3	230.8	0	-4,-5	-	-	14.472	ALTERNATIVE:1
ENSMUSG00000071337	Tia1	ENSMUST00000156762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071337	Tia1	ENSMUST00000136387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000095753	ENSMUSP00000093425	TRANSLATION	protein_coding	-	CCDS20312.1	1	386	0	8.358	7.5	230.8	0	-4,-5	-	-	14.67	PRINCIPAL:2
ENSMUSG00000071337	Tia1	ENSMUST00000205024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000139928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071337	Tia1	ENSMUST00000154983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071337	Tia1	ENSMUST00000203763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000113712	ENSMUSP00000138652	TRANSLATION	nonsense_mediated_decay	-	-	5	212	0	5.728	1.2	164.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000203546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000113708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000124683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071337	Tia1	ENSMUST00000152852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000095754	ENSMUSP00000093426	TRANSLATION	protein_coding	-	-	5	385	0	8.358	7.5	230.8	0	-4,-5	-	-	14.67	ALTERNATIVE:1
ENSMUSG00000071337	Tia1	ENSMUST00000154438	ENSMUSP00000145218	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	2.764	0	80.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071337	Tia1	ENSMUST00000143718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000141960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071337	Tia1	ENSMUST00000113713	ENSMUSP00000109342	TRANSLATION	protein_coding	-	CCDS51834.1	1	377	0	8.094	6.3	228.4	0	-4,-5	-	-	13.506	MINOR
ENSMUSG00000033963	Fancd2os	ENSMUST00000125139	ENSMUSP00000121804	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	0	7.6	313.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033963	Fancd2os	ENSMUST00000035870	ENSMUSP00000035316	TRANSLATION	protein_coding	-	CCDS20427.1	1	178	0	0	7.6	313.6	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000030161	Gabarapl1	ENSMUST00000204956	ENSMUSP00000145175	TRANSLATION	protein_coding	-	CCDS51923.1	3	117	0	3.5	19	165.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030161	Gabarapl1	ENSMUST00000204487	ENSMUSP00000145078	TRANSLATION	protein_coding	-	-	1	97	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030161	Gabarapl1	ENSMUST00000032264	ENSMUSP00000032264	TRANSLATION	protein_coding	-	CCDS51923.1	1	117	0	3.5	19	165.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030161	Gabarapl1	ENSMUST00000204639	ENSMUSP00000144803	TRANSLATION	protein_coding	stop	-	2	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030342	Cd9	ENSMUST00000032492	ENSMUSP00000032492	TRANSLATION	protein_coding	-	CCDS20551.1	1	226	0	5.29	7.6	160.8	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030342	Cd9	ENSMUST00000140024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030342	Cd9	ENSMUST00000130132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000183	Fgf6	ENSMUST00000000187	ENSMUSP00000000187	TRANSLATION	protein_coding	-	CCDS20561.1	1	208	0	2.6	11.3	139.4	0	-2,0	-	-	15	PRINCIPAL:1
ENSMUSG00000058295	Prp2	ENSMUST00000178961	ENSMUSP00000135942	TRANSLATION	protein_coding	-	CCDS51931.1	1	316	0	0	0.5	0	0	3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000058295	Prp2	ENSMUST00000076061	ENSMUSP00000075435	TRANSLATION	protein_coding	-	CCDS51931.1	5	316	0	0	0.5	0	0	3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000043505	Gimap5	ENSMUST00000135174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043505	Gimap5	ENSMUST00000055558	ENSMUSP00000056820	TRANSLATION	protein_coding	-	CCDS20114.1	1	308	18	1.1	0.5	263	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043505	Gimap5	ENSMUST00000147047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043505	Gimap5	ENSMUST00000203006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003031	Cdkn1b	ENSMUST00000003115	ENSMUSP00000003115	TRANSLATION	protein_coding	-	CCDS20642.1	1	197	0	1	7.5	76.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000003031	Cdkn1b	ENSMUST00000067327	ENSMUSP00000065832	TRANSLATION	protein_coding	-	CCDS20642.1	1	197	0	1	7.5	76.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000003031	Cdkn1b	ENSMUST00000204807	ENSMUSP00000145056	TRANSLATION	protein_coding	-	CCDS20642.1	5	197	0	1	7.5	76.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030321	Efcab12	ENSMUST00000184428	ENSMUSP00000139144	TRANSLATION	protein_coding	-	CCDS71816.1	5	673	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000030321	Efcab12	ENSMUST00000032468	ENSMUSP00000138850	TRANSLATION	protein_coding	-	-	5	673	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000030321	Efcab12	ENSMUST00000124531	ENSMUSP00000139385	TRANSLATION	nonsense_mediated_decay	-	-	2	397	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068323	Slc4a5	ENSMUST00000039212	ENSMUSP00000041007	TRANSLATION	protein_coding	-	CCDS51819.1	5	1001	0	11.62	0.5	1111	7	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068323	Slc4a5	ENSMUST00000113899	ENSMUSP00000109532	TRANSLATION	protein_coding	-	-	5	1041	0	11.62	0	1111	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068323	Slc4a5	ENSMUST00000113900	ENSMUSP00000109533	TRANSLATION	protein_coding	-	-	5	1116	0	11.62	0	1111	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068323	Slc4a5	ENSMUST00000131432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068323	Slc4a5	ENSMUST00000141863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068323	Slc4a5	ENSMUST00000122897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093820	Vmn2r21	ENSMUST00000163607	ENSMUSP00000128981	TRANSLATION	protein_coding	-	CCDS51899.1	5	853	5	3.1	0.5	395	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000052738	Suclg1	ENSMUST00000123159	ENSMUSP00000134171	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000052738	Suclg1	ENSMUST00000173409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052738	Suclg1	ENSMUST00000203632	ENSMUSP00000145246	TRANSLATION	protein_coding	start	-	2	126	4	1	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000052738	Suclg1	ENSMUST00000127660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052738	Suclg1	ENSMUST00000064740	ENSMUSP00000065113	TRANSLATION	protein_coding	-	CCDS20246.2	1	346	23	7.58	1.7	195.9	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000052738	Suclg1	ENSMUST00000173366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033940	Brk1	ENSMUST00000035725	ENSMUSP00000041644	TRANSLATION	protein_coding	-	CCDS39595.1	1	75	2	2.08	14.3	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000105432	Gm43218	ENSMUST00000196275	ENSMUSP00000143685	TRANSLATION	IG_V_gene	stop	-	-	114	2	1.5	0	45.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076581	Igkv8-26	ENSMUST00000103382	ENSMUSP00000100183	TRANSLATION	IG_V_gene	stop	-	-	123	0	1.5	0	63	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076572	Igkv18-36	ENSMUST00000103373	ENSMUSP00000100174	TRANSLATION	IG_V_gene	stop	-	-	114	2	1.5	0	59	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076572	Igkv18-36	ENSMUST00000200160	ENSMUSP00000142735	TRANSLATION	IG_V_gene	stop	-	-	113	2	1.5	0	59	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000052861	Dnah6	ENSMUST00000064948	ENSMUSP00000068758	TRANSLATION	protein_coding	-	CCDS51813.1	5	4144	64	36.89	0.5	2615.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000052861	Dnah6	ENSMUST00000204053	ENSMUSP00000144791	TRANSLATION	protein_coding	-	CCDS51813.1	5	4144	64	36.89	0.5	2615.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000052861	Dnah6	ENSMUST00000114040	ENSMUSP00000109674	TRANSLATION	protein_coding	-	-	5	4092	62	35.89	0	2580	0	-4,-5	-	-	12.546	MINOR
ENSMUSG00000052861	Dnah6	ENSMUST00000114038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030165	Klrd1	ENSMUST00000203965	ENSMUSP00000144712	TRANSLATION	nonsense_mediated_decay	start	-	3	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030165	Klrd1	ENSMUST00000159804	ENSMUSP00000123703	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000030165	Klrd1	ENSMUST00000112063	ENSMUSP00000107694	TRANSLATION	protein_coding	-	CCDS57456.1	1	179	0	3.66	1.5	64	3	-1,-5	-	-	11.64	PRINCIPAL:2
ENSMUSG00000030165	Klrd1	ENSMUST00000032268	ENSMUSP00000032268	TRANSLATION	protein_coding	-	-	5	155	0	3.33	0	63.9	0	-2,-5	-	-	10.968	ALTERNATIVE:2
ENSMUSG00000030165	Klrd1	ENSMUST00000159077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030165	Klrd1	ENSMUST00000119520	ENSMUSP00000113399	TRANSLATION	protein_coding	-	-	5	198	0	3.84	0	54.7	3	-1,-5	-	-	11.13	MINOR
ENSMUSG00000032766	Gng11	ENSMUST00000031670	ENSMUSP00000031670	TRANSLATION	protein_coding	-	CCDS39419.1	1	73	0	2	15.7	69.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030264	Thumpd3	ENSMUST00000153310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030264	Thumpd3	ENSMUST00000204786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030264	Thumpd3	ENSMUST00000152795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030264	Thumpd3	ENSMUST00000134657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030264	Thumpd3	ENSMUST00000155378	ENSMUSP00000120509	TRANSLATION	protein_coding	stop	-	2	221	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030264	Thumpd3	ENSMUST00000138278	ENSMUSP00000145411	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030264	Thumpd3	ENSMUST00000032398	ENSMUSP00000032398	TRANSLATION	protein_coding	-	CCDS20410.1	1	505	18	3.97	3.9	234.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030264	Thumpd3	ENSMUST00000204866	ENSMUSP00000144805	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030264	Thumpd3	ENSMUST00000137396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030264	Thumpd3	ENSMUST00000145054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051256	Jagn1	ENSMUST00000204254	ENSMUSP00000145000	TRANSLATION	protein_coding	-	CCDS85121.1	1	67	0	0	1.5	54.8	0	-4,-7	-	-	0.12	MINOR
ENSMUSG00000051256	Jagn1	ENSMUST00000101070	ENSMUSP00000098631	TRANSLATION	protein_coding	-	CCDS20419.1	1	183	0	0	17.5	230.2	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000051256	Jagn1	ENSMUST00000204287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094006	Igkv4-59	ENSMUST00000103354	ENSMUSP00000100155	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	58	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000090164	BC035044	ENSMUST00000178918	ENSMUSP00000137315	TRANSLATION	protein_coding	-	-	2	102	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000090164	BC035044	ENSMUST00000160290	ENSMUSP00000125357	TRANSLATION	protein_coding	-	CCDS57450.1	1	138	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000014748	Tex261	ENSMUST00000125614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014748	Tex261	ENSMUST00000138192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014748	Tex261	ENSMUST00000137773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014748	Tex261	ENSMUST00000014892	ENSMUSP00000014892	TRANSLATION	protein_coding	-	CCDS20285.1	1	196	0	0	13	0	0	2,-3	-	-	4	PRINCIPAL:1
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000127925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000144973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000152464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000149557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000169256	ENSMUSP00000130121	TRANSLATION	protein_coding	-	CCDS51749.1	5	1940	0	0	0.5	945.4	0	-1,2	-	-	6	PRINCIPAL:2
ENSMUSG00000063455	D630045J12Rik	ENSMUST00000117556	ENSMUSP00000112939	TRANSLATION	protein_coding	-	-	5	1799	0	0	0	945.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000029759	Pon3	ENSMUST00000176039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029759	Pon3	ENSMUST00000129344	ENSMUSP00000118137	TRANSLATION	nonsense_mediated_decay	-	-	1	74	2	1.85	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000029759	Pon3	ENSMUST00000156848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029759	Pon3	ENSMUST00000125686	ENSMUSP00000135603	TRANSLATION	protein_coding	stop	-	3	135	5	3	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029759	Pon3	ENSMUST00000176948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029759	Pon3	ENSMUST00000031773	ENSMUSP00000031773	TRANSLATION	protein_coding	-	CCDS19899.1	1	354	10	8.68	5.1	137.2	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000030247	Kcnj8	ENSMUST00000203945	ENSMUSP00000145440	TRANSLATION	protein_coding	-	CCDS20685.1	1	424	0	2.33	8.8	462.6	2	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030247	Kcnj8	ENSMUST00000032374	ENSMUSP00000032374	TRANSLATION	protein_coding	-	-	1	127	0	1	0	98.5	1	-4,-6	-	-	2.574	MINOR
ENSMUSG00000094335	Igkv1-117	ENSMUST00000103317	ENSMUSP00000100118	TRANSLATION	IG_V_gene	stop	-	-	119	5	1.5	0	60.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000043832	Clec4a3	ENSMUST00000117173	ENSMUSP00000112716	TRANSLATION	protein_coding	-	CCDS20508.1	1	237	5	3.81	1.5	82.3	1	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000043832	Clec4a3	ENSMUST00000204427	ENSMUSP00000144856	TRANSLATION	protein_coding	stop	-	3	109	0	1.2	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000043832	Clec4a3	ENSMUST00000088468	ENSMUSP00000085816	TRANSLATION	protein_coding	-	CCDS20508.1	1	237	5	3.81	1.5	82.3	1	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000030117	Gdf3	ENSMUST00000204882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030117	Gdf3	ENSMUST00000032211	ENSMUSP00000032211	TRANSLATION	protein_coding	-	CCDS20499.1	1	366	0	0.48	2.7	136	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030207	Fam234b	ENSMUST00000151951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030207	Fam234b	ENSMUST00000151071	ENSMUSP00000125359	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030207	Fam234b	ENSMUST00000111916	ENSMUSP00000107547	TRANSLATION	protein_coding	-	-	1	658	8	0	0	0	1	-4,-5	-	-	6	MINOR
ENSMUSG00000030207	Fam234b	ENSMUST00000130612	ENSMUSP00000125353	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030207	Fam234b	ENSMUST00000111915	ENSMUSP00000107546	TRANSLATION	protein_coding	-	CCDS39681.1	1	624	8	0	6.3	0	1	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000054226	Tprkb	ENSMUST00000202142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054226	Tprkb	ENSMUST00000149026	ENSMUSP00000117259	TRANSLATION	protein_coding	stop	-	3	132	0	3.58	0	117	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054226	Tprkb	ENSMUST00000089570	ENSMUSP00000086998	TRANSLATION	protein_coding	-	-	5	158	0	4.212	0	127.9	0	-4,-6	-	-	9.432	MINOR
ENSMUSG00000054226	Tprkb	ENSMUST00000200680	ENSMUSP00000144160	TRANSLATION	protein_coding	-	CCDS20305.1	3	175	0	4.83	11.5	150.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054226	Tprkb	ENSMUST00000113751	ENSMUSP00000109380	TRANSLATION	protein_coding	-	-	1	91	0	2.33	0	73.7	0	-4,-6	-	-	2.418	MINOR
ENSMUSG00000054226	Tprkb	ENSMUST00000202588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054226	Tprkb	ENSMUST00000067137	ENSMUSP00000063927	TRANSLATION	protein_coding	-	CCDS20305.1	1	175	0	4.83	11.5	150.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054226	Tprkb	ENSMUST00000150249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054226	Tprkb	ENSMUST00000201289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054226	Tprkb	ENSMUST00000201217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054226	Tprkb	ENSMUST00000202803	ENSMUSP00000144660	TRANSLATION	protein_coding	-	-	1	158	0	4.212	0	127.9	0	-4,-6	-	-	9.432	MINOR
ENSMUSG00000054226	Tprkb	ENSMUST00000113753	ENSMUSP00000109382	TRANSLATION	protein_coding	-	CCDS20305.1	1	175	0	4.83	11.5	150.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054226	Tprkb	ENSMUST00000113752	ENSMUSP00000109381	TRANSLATION	protein_coding	-	CCDS20305.1	5	175	0	4.83	11.5	150.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000054226	Tprkb	ENSMUST00000201939	ENSMUSP00000144588	TRANSLATION	protein_coding	stop	-	3	110	0	2.75	0	88.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064259	Vmn1r13	ENSMUST00000227421	ENSMUSP00000154429	TRANSLATION	protein_coding	-	CCDS20176.1	-	300	0	0	1.5	191.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064259	Vmn1r13	ENSMUST00000078885	ENSMUSP00000077924	TRANSLATION	protein_coding	-	CCDS20176.1	-	300	0	0	1.5	191.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064259	Vmn1r13	ENSMUST00000227298	ENSMUSP00000154039	TRANSLATION	protein_coding	-	CCDS20176.1	-	300	0	0	1.5	191.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064259	Vmn1r13	ENSMUST00000226892	ENSMUSP00000154534	TRANSLATION	protein_coding	-	CCDS20176.1	-	300	0	0	1.5	191.3	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094902	Igkv10-95	ENSMUST00000103329	ENSMUSP00000100130	TRANSLATION	IG_V_gene	start/stop	-	-	95	5	1	0	63.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094902	Igkv10-95	ENSMUST00000198735	ENSMUSP00000143352	TRANSLATION	IG_V_gene	stop	-	-	115	5	1.5	0	63.3	0	0,-4	-	-	-1	PRINCIPAL:5
ENSMUSG00000096461	Igkv14-130	ENSMUST00000103307	ENSMUSP00000100108	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	56.3	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096461	Igkv14-130	ENSMUST00000196006	ENSMUSP00000143018	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	56.3	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000062546	V1ra8	ENSMUST00000078371	ENSMUSP00000077479	TRANSLATION	protein_coding	-	CCDS20354.1	-	279	0	0	0.5	268	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000226520	ENSMUSP00000154082	TRANSLATION	protein_coding	-	CCDS20353.1	-	309	0	0	0.5	305.1	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000228394	ENSMUSP00000153951	TRANSLATION	protein_coding	-	CCDS20353.1	-	309	0	0	0.5	305.1	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000227893	ENSMUSP00000154024	TRANSLATION	protein_coding	-	CCDS20353.1	-	309	0	0	0.5	305.1	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000228385	ENSMUSP00000154336	TRANSLATION	protein_coding	-	-	-	121	0	0	0	125.4	7	-4,-6	-	-	0	MINOR
ENSMUSG00000060816	Vmn1r52	ENSMUST00000228665	ENSMUSP00000154275	TRANSLATION	protein_coding	-	CCDS20353.1	-	309	0	0	0.5	305.1	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000079832	ENSMUSP00000078760	TRANSLATION	protein_coding	-	CCDS20353.1	-	309	0	0	0.5	305.1	10	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060816	Vmn1r52	ENSMUST00000227100	ENSMUSP00000154539	TRANSLATION	protein_coding	-	-	-	109	0	0	0	88.1	5	-4,0	-	-	0	MINOR
ENSMUSG00000060816	Vmn1r52	ENSMUST00000227578	ENSMUSP00000154194	TRANSLATION	protein_coding	-	-	-	130	0	0	0	122.4	7	-2,-5	-	-	0	MINOR
ENSMUSG00000030350	Prmt8	ENSMUST00000032500	ENSMUSP00000032500	TRANSLATION	protein_coding	-	CCDS57449.1	1	394	21	8.5	12.8	33.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000029678	Hyal5	ENSMUST00000201585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029678	Hyal5	ENSMUST00000031689	ENSMUSP00000031689	TRANSLATION	protein_coding	-	CCDS19948.1	5	526	0	2	0.5	464.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000029678	Hyal5	ENSMUST00000200968	ENSMUSP00000144011	TRANSLATION	protein_coding	-	CCDS19948.1	1	526	0	2	0.5	464.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068328	Aup1	ENSMUST00000204761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000203749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000204383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000204719	ENSMUSP00000145409	TRANSLATION	nonsense_mediated_decay	start	-	3	104	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000068328	Aup1	ENSMUST00000204343	ENSMUSP00000145335	TRANSLATION	nonsense_mediated_decay	start	-	1	160	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000068328	Aup1	ENSMUST00000203331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000203915	ENSMUSP00000145020	TRANSLATION	nonsense_mediated_decay	start	-	1	391	2	2	0	36.5	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000068328	Aup1	ENSMUST00000204895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000205152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000205042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000204752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000203123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000203180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000204385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000204510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068328	Aup1	ENSMUST00000092618	ENSMUSP00000090281	TRANSLATION	protein_coding	-	CCDS39526.1	1	439	2	2	2.9	36.5	2	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000068328	Aup1	ENSMUST00000204209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030103	Bhlhe40	ENSMUST00000204550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030103	Bhlhe40	ENSMUST00000166346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030103	Bhlhe40	ENSMUST00000032194	ENSMUSP00000032194	TRANSLATION	protein_coding	-	CCDS20400.1	1	411	0	1.28	7.5	92	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030103	Bhlhe40	ENSMUST00000163617	ENSMUSP00000132157	TRANSLATION	protein_coding	-	-	2	132	0	1.28	0	47.6	0	-4,-5	-	-	9.102	MINOR
ENSMUSG00000060032	H2aj	ENSMUST00000074556	ENSMUSP00000074142	TRANSLATION	protein_coding	-	CCDS20654.1	-	129	0	1	14.8	132.6	0	-4,-7	-	-	15.964	PRINCIPAL:2
ENSMUSG00000060032	H2aj	ENSMUST00000203982	ENSMUSP00000144974	TRANSLATION	protein_coding	-	-	3	126	0	1	14.8	133.2	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000030206	Gsg1	ENSMUST00000111909	ENSMUSP00000107540	TRANSLATION	protein_coding	-	-	5	324	0	0	1	174.4	5	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030206	Gsg1	ENSMUST00000111910	ENSMUSP00000107541	TRANSLATION	protein_coding	-	CCDS39683.1	5	365	0	0	2.7	174.4	5	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030206	Gsg1	ENSMUST00000111911	ENSMUSP00000107542	TRANSLATION	protein_coding	-	CCDS39683.1	1	365	0	0	2.7	174.4	5	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030206	Gsg1	ENSMUST00000087729	ENSMUSP00000085022	TRANSLATION	protein_coding	-	CCDS39682.1	1	368	0	0	2.7	174.4	5	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000061838	Suclg2	ENSMUST00000203109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061838	Suclg2	ENSMUST00000204567	ENSMUSP00000145471	TRANSLATION	protein_coding	stop	-	3	83	5	2.5	0	83.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061838	Suclg2	ENSMUST00000079847	ENSMUSP00000078774	TRANSLATION	protein_coding	-	CCDS85100.1	1	384	23	9.83	0.5	335.2	0	-4,-7	-	-	15.378	MINOR
ENSMUSG00000061838	Suclg2	ENSMUST00000203071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061838	Suclg2	ENSMUST00000204224	ENSMUSP00000144827	TRANSLATION	protein_coding	-	CCDS20381.1	1	433	23	10.58	2.9	353.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000094345	Igkv14-126	ENSMUST00000103310	ENSMUSP00000100111	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	58.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000002871	Tpra1	ENSMUST00000150236	ENSMUSP00000145098	TRANSLATION	protein_coding	start	-	5	222	0	0	0	171.7	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000152585	ENSMUSP00000144812	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000148874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002871	Tpra1	ENSMUST00000204584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002871	Tpra1	ENSMUST00000055022	ENSMUSP00000063042	TRANSLATION	protein_coding	-	CCDS39555.1	1	369	0	0	3.9	305.4	16	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000002871	Tpra1	ENSMUST00000204765	ENSMUSP00000145050	TRANSLATION	protein_coding	-	CCDS39555.1	1	369	0	0	3.9	305.4	16	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000002871	Tpra1	ENSMUST00000152045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002871	Tpra1	ENSMUST00000128790	ENSMUSP00000145116	TRANSLATION	nonsense_mediated_decay	-	-	5	210	0	0	0	174.7	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000129979	ENSMUSP00000145368	TRANSLATION	nonsense_mediated_decay	start	-	5	230	0	0	0	174.7	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000135778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000128171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000203694	ENSMUSP00000144931	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000153885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002871	Tpra1	ENSMUST00000203345	ENSMUSP00000144846	TRANSLATION	protein_coding	-	-	5	192	0	0	0	153.4	9	-4,-7	-	-	0	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000123257	ENSMUSP00000145118	TRANSLATION	nonsense_mediated_decay	start	-	5	71	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000203155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002871	Tpra1	ENSMUST00000144405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000203648	ENSMUSP00000145404	TRANSLATION	nonsense_mediated_decay	-	-	5	222	0	0	0	199.2	15	-4,-7	-	-	-1	MINOR
ENSMUSG00000002871	Tpra1	ENSMUST00000141163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000138415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000203185	ENSMUSP00000145168	TRANSLATION	protein_coding	-	CCDS39555.1	5	369	0	0	3.9	305.4	16	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000002871	Tpra1	ENSMUST00000151379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002871	Tpra1	ENSMUST00000153874	ENSMUSP00000118017	TRANSLATION	protein_coding	stop	-	5	188	0	0	0	167.4	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000051153	Tas2r105	ENSMUST00000053652	ENSMUSP00000058006	TRANSLATION	protein_coding	-	CCDS20612.1	-	300	0	0	0.5	356.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000043931	Gimap7	ENSMUST00000204266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043931	Gimap7	ENSMUST00000052503	ENSMUSP00000057143	TRANSLATION	protein_coding	-	CCDS20112.1	1	293	19	2	1.5	267.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043931	Gimap7	ENSMUST00000204785	ENSMUSP00000145238	TRANSLATION	protein_coding	stop	-	3	86	14	1	0	107.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076589	Igkv8-18	ENSMUST00000103390	ENSMUSP00000100191	TRANSLATION	IG_V_gene	stop	-	-	123	0	1.5	0	65.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000096515	Igkv14-100	ENSMUST00000199510	ENSMUSP00000143410	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	51.1	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096515	Igkv14-100	ENSMUST00000103325	ENSMUSP00000100126	TRANSLATION	IG_V_gene	stop	-	-	116	2	1.5	0	51.1	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093755	Vmn1r39	ENSMUST00000226217	ENSMUSP00000154221	TRANSLATION	protein_coding	-	CCDS51803.1	-	305	0	0	0.5	175.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093755	Vmn1r39	ENSMUST00000228008	ENSMUSP00000154778	TRANSLATION	protein_coding	-	-	-	268	0	0	0	169	5	-2,-5	-	-	5.616	MINOR
ENSMUSG00000093755	Vmn1r39	ENSMUST00000228862	ENSMUSP00000153741	TRANSLATION	protein_coding	-	CCDS51803.1	-	305	0	0	0.5	175.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093755	Vmn1r39	ENSMUST00000226783	ENSMUSP00000154558	TRANSLATION	protein_coding	-	CCDS51803.1	-	305	0	0	0.5	175.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093755	Vmn1r39	ENSMUST00000228651	ENSMUSP00000153888	TRANSLATION	protein_coding	-	-	-	268	0	0	0	169	5	-2,-5	-	-	5.616	MINOR
ENSMUSG00000093755	Vmn1r39	ENSMUST00000228919	ENSMUSP00000154432	TRANSLATION	protein_coding	-	-	-	268	0	0	0	169	5	-2,-5	-	-	5.616	MINOR
ENSMUSG00000093755	Vmn1r39	ENSMUST00000227555	ENSMUSP00000153835	TRANSLATION	protein_coding	-	CCDS51803.1	-	305	0	0	0.5	175.4	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093755	Vmn1r39	ENSMUST00000227285	ENSMUSP00000154639	TRANSLATION	protein_coding	-	-	-	268	0	0	0	169	5	-2,-5	-	-	5.616	MINOR
ENSMUSG00000010796	Asz1	ENSMUST00000136194	ENSMUSP00000122680	TRANSLATION	nonsense_mediated_decay	-	-	5	148	0	2.56	0	78.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010796	Asz1	ENSMUST00000010940	ENSMUSP00000010940	TRANSLATION	protein_coding	-	CCDS19929.1	1	475	0	4.84	8.8	123.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000010796	Asz1	ENSMUST00000146216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010796	Asz1	ENSMUST00000136626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010796	Asz1	ENSMUST00000131614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071517	Gm10334	ENSMUST00000095999	ENSMUSP00000093698	TRANSLATION	protein_coding	-	CCDS39468.1	1	246	26	4.5	13.1	272.3	0	4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000001763	Tspan33	ENSMUST00000137925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001763	Tspan33	ENSMUST00000046750	ENSMUSP00000045282	TRANSLATION	protein_coding	-	CCDS19964.1	1	283	0	2.69	10.8	324.1	5	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000001763	Tspan33	ENSMUST00000115250	ENSMUSP00000110905	TRANSLATION	protein_coding	-	CCDS80506.1	1	282	0	2.69	10.8	319.6	5	-4,-5	-	-	14.73	ALTERNATIVE:1
ENSMUSG00000073110	Olfr444	ENSMUST00000095955	ENSMUSP00000093649	TRANSLATION	protein_coding	-	CCDS20085.1	-	310	0	0.42	3.9	204	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073110	Olfr444	ENSMUST00000204092	ENSMUSP00000144691	TRANSLATION	protein_coding	-	CCDS20085.1	5	310	0	0.42	3.9	204	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030172	Erc1	ENSMUST00000183703	ENSMUSP00000139031	TRANSLATION	protein_coding	-	CCDS39611.1	1	1120	9	0	9.5	1244.4	0	-4,-7	-	-	14.43	PRINCIPAL:2
ENSMUSG00000030172	Erc1	ENSMUST00000185143	ENSMUSP00000138989	TRANSLATION	nonsense_mediated_decay	-	-	5	720	9	0	0	407.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000184838	ENSMUSP00000139030	TRANSLATION	nonsense_mediated_decay	-	-	1	976	9	0	6.6	1210.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000079582	ENSMUSP00000078534	TRANSLATION	protein_coding	-	CCDS20476.1	1	368	0	0	0.5	581.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000032279	ENSMUSP00000032279	TRANSLATION	protein_coding	-	CCDS39611.1	1	1120	9	0	9.5	1244.4	0	-4,-7	-	-	14.43	PRINCIPAL:2
ENSMUSG00000030172	Erc1	ENSMUST00000183911	ENSMUSP00000139118	TRANSLATION	protein_coding	-	-	5	1088	9	0	9.5	1223.3	0	-4,-7	-	-	13.164	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000183880	ENSMUSP00000138823	TRANSLATION	nonsense_mediated_decay	-	-	5	948	9	0	8.6	1217.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000204666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030172	Erc1	ENSMUST00000183872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030172	Erc1	ENSMUST00000184320	ENSMUSP00000139207	TRANSLATION	nonsense_mediated_decay	start	-	5	285	0	0	0	290.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000185139	ENSMUSP00000139152	TRANSLATION	nonsense_mediated_decay	-	-	5	992	9	0	6.6	1000.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030172	Erc1	ENSMUST00000183741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030172	Erc1	ENSMUST00000184864	ENSMUSP00000139256	TRANSLATION	protein_coding	-	-	5	1116	9	0	11.5	1232.4	0	-4,-7	-	-	14.28	ALTERNATIVE:1
ENSMUSG00000030344	Akap3	ENSMUST00000202878	ENSMUSP00000143794	TRANSLATION	protein_coding	-	CCDS20558.1	1	864	0	0	0.5	1358.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030344	Akap3	ENSMUST00000202574	ENSMUSP00000144405	TRANSLATION	protein_coding	-	CCDS20558.1	5	864	0	0	0.5	1358.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030344	Akap3	ENSMUST00000095440	ENSMUSP00000093091	TRANSLATION	protein_coding	-	CCDS20558.1	1	864	0	0	0.5	1358.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033720	Sfxn5	ENSMUST00000149362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033720	Sfxn5	ENSMUST00000113787	ENSMUSP00000109417	TRANSLATION	protein_coding	-	-	2	169	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000033720	Sfxn5	ENSMUST00000203035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033720	Sfxn5	ENSMUST00000138489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033720	Sfxn5	ENSMUST00000045846	ENSMUSP00000041872	TRANSLATION	protein_coding	-	CCDS20291.1	1	342	0	0	1.5	411.4	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033720	Sfxn5	ENSMUST00000059034	ENSMUSP00000054648	TRANSLATION	protein_coding	-	-	1	302	0	0	0	339.9	1	-4,-6	-	-	1.71	MINOR
ENSMUSG00000033720	Sfxn5	ENSMUST00000148179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033720	Sfxn5	ENSMUST00000134392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033720	Sfxn5	ENSMUST00000113788	ENSMUSP00000109418	TRANSLATION	protein_coding	-	-	1	108	0	0	0	52.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000000248	Clec2g	ENSMUST00000204259	ENSMUSP00000144879	TRANSLATION	protein_coding	-	CCDS85168.1	1	218	0	3	0.5	52.3	2	-4,-7	-	-	10.218	MINOR
ENSMUSG00000000248	Clec2g	ENSMUST00000142388	ENSMUSP00000115140	TRANSLATION	protein_coding	-	CCDS51921.1	1	207	0	3	0.5	52.3	2	-4,-5	-	-	10.218	MINOR
ENSMUSG00000000248	Clec2g	ENSMUST00000146925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000248	Clec2g	ENSMUST00000075789	ENSMUSP00000075192	TRANSLATION	protein_coding	-	CCDS51921.1	1	207	0	3	0.5	52.3	2	-4,-5	-	-	10.218	MINOR
ENSMUSG00000000248	Clec2g	ENSMUST00000203405	ENSMUSP00000144788	TRANSLATION	protein_coding	-	CCDS85167.1	1	212	0	3	0.5	52.3	2	-4,-5	-	-	10.218	MINOR
ENSMUSG00000000248	Clec2g	ENSMUST00000000254	ENSMUSP00000000254	TRANSLATION	protein_coding	-	CCDS20578.1	1	269	0	3	0.5	74.4	2	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094762	Gm10670	ENSMUST00000098744	ENSMUSP00000096340	TRANSLATION	protein_coding	-	CCDS52074.1	-	321	0	0	0.5	59.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030968	Pdilt	ENSMUST00000208275	ENSMUSP00000146664	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	1.6	0	48.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030968	Pdilt	ENSMUST00000033267	ENSMUSP00000033267	TRANSLATION	protein_coding	-	CCDS52378.1	1	588	0	7.24	0.5	166	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038201	Kcna7	ENSMUST00000107774	ENSMUSP00000103403	TRANSLATION	protein_coding	-	CCDS39951.1	1	489	0	2	1.5	264.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030680	Pagr1a	ENSMUST00000200948	ENSMUSP00000144469	TRANSLATION	protein_coding	-	CCDS21854.1	1	253	0	0	5.3	169.9	0	-2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000030680	Pagr1a	ENSMUST00000206416	ENSMUSP00000146318	TRANSLATION	protein_coding	-	-	3	135	0	0	0	35.7	0	-2,-3	-	-	0	MINOR
ENSMUSG00000030680	Pagr1a	ENSMUST00000162069	ENSMUSP00000123889	TRANSLATION	protein_coding	-	-	3	91	0	0	0	79.8	0	-4,-5	-	-	0.594	MINOR
ENSMUSG00000032860	P2ry2	ENSMUST00000207916	ENSMUSP00000146352	TRANSLATION	protein_coding	-	CCDS21508.1	1	373	0	0.9	3.9	127.3	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000032860	P2ry2	ENSMUST00000208258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032860	P2ry2	ENSMUST00000208340	ENSMUSP00000146679	TRANSLATION	protein_coding	-	CCDS21508.1	1	373	0	0.9	3.9	127.3	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000032860	P2ry2	ENSMUST00000178340	ENSMUSP00000137152	TRANSLATION	protein_coding	-	CCDS21508.1	1	373	0	0.9	3.9	127.3	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000032860	P2ry2	ENSMUST00000037540	ENSMUSP00000036765	TRANSLATION	protein_coding	-	CCDS21508.1	1	373	0	0.9	3.9	127.3	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000032860	P2ry2	ENSMUST00000207049	ENSMUSP00000146923	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000047558	ENSMUSP00000043379	TRANSLATION	protein_coding	-	CCDS71985.1	1	603	0	11.25	6.3	534.5	0	-4,-5	-	-	13.214	ALTERNATIVE:1
ENSMUSG00000038943	Prc1	ENSMUST00000174111	ENSMUSP00000134282	TRANSLATION	protein_coding	start	-	3	102	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000172911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038943	Prc1	ENSMUST00000174599	ENSMUSP00000134548	TRANSLATION	protein_coding	start	-	5	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000174254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038943	Prc1	ENSMUST00000173170	ENSMUSP00000133817	TRANSLATION	protein_coding	start/stop	-	3	235	0	5.5	0	247.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000173914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038943	Prc1	ENSMUST00000174172	ENSMUSP00000133387	TRANSLATION	protein_coding	-	-	5	620	0	11.25	6.3	547.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000038943	Prc1	ENSMUST00000173824	ENSMUSP00000133910	TRANSLATION	protein_coding	-	CCDS71986.1	1	566	0	11.25	6.3	525.2	0	-4,-5	-	-	12.656	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000172781	ENSMUSP00000133618	TRANSLATION	protein_coding	start	-	2	151	0	1.75	0	52.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000163812	ENSMUSP00000129675	TRANSLATION	protein_coding	-	CCDS39998.2	1	606	0	11.25	6.3	536.8	0	-4,-5	-	-	13.352	PRINCIPAL:3
ENSMUSG00000038943	Prc1	ENSMUST00000206178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038943	Prc1	ENSMUST00000174199	ENSMUSP00000133295	TRANSLATION	protein_coding	-	-	5	525	0	10.25	0	474.9	0	-4,-5	-	-	5.64	MINOR
ENSMUSG00000038943	Prc1	ENSMUST00000174051	ENSMUSP00000134262	TRANSLATION	protein_coding	start	-	1	249	0	3.75	0	178.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052833	Sae1	ENSMUST00000211741	ENSMUSP00000147771	TRANSLATION	protein_coding	-	CCDS85221.1	1	328	0	7.548	0.5	155.6	0	-4,-5	-	-	9.864	MINOR
ENSMUSG00000052833	Sae1	ENSMUST00000210999	ENSMUSP00000147409	TRANSLATION	protein_coding	-	CCDS20848.1	1	350	0	8.35	6.5	164.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000052833	Sae1	ENSMUST00000094815	ENSMUSP00000092409	TRANSLATION	protein_coding	-	CCDS20848.1	1	350	0	8.35	6.5	164.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000052833	Sae1	ENSMUST00000209749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078817	Nlrp12	ENSMUST00000108653	ENSMUSP00000104293	TRANSLATION	protein_coding	-	CCDS51963.1	5	1054	9	7.96	0.5	379.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078817	Nlrp12	ENSMUST00000205233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030722	Nfatc2ip	ENSMUST00000142947	ENSMUSP00000145755	TRANSLATION	protein_coding	start	-	5	110	0	2	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030722	Nfatc2ip	ENSMUST00000075671	ENSMUSP00000075094	TRANSLATION	protein_coding	-	CCDS21827.1	1	412	0	4	0.5	43.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000084234	4933405O20Rik	ENSMUST00000119710	ENSMUSP00000138215	TRANSLATION	protein_coding	-	CCDS71974.1	-	396	14	1	1.5	225.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228133	ENSMUSP00000154251	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228633	ENSMUSP00000153777	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000227479	ENSMUSP00000154388	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228367	ENSMUSP00000154816	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000226694	ENSMUSP00000154516	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000227695	ENSMUSP00000154057	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228676	ENSMUSP00000154688	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228467	ENSMUSP00000154357	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000227461	ENSMUSP00000154568	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000227264	ENSMUSP00000154202	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000171039	ENSMUSP00000128295	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000227411	ENSMUSP00000154307	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091924	Vmn1r185	ENSMUST00000228004	ENSMUSP00000154013	TRANSLATION	protein_coding	-	CCDS21005.1	-	319	0	0	0.5	104.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000109129	Gm44973	ENSMUST00000207050	ENSMUSP00000147233	TRANSLATION	protein_coding,RT	-	-	3	189	12	0.4	0	56.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040435	Ppp1r15a	ENSMUST00000211212	ENSMUSP00000147703	TRANSLATION	protein_coding	start	-	3	103	0	0.6	0	38.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040435	Ppp1r15a	ENSMUST00000042105	ENSMUSP00000049488	TRANSLATION	protein_coding	-	CCDS21249.1	1	657	0	1.43	0.5	44.8	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000040435	Ppp1r15a	ENSMUST00000167273	ENSMUSP00000128497	TRANSLATION	protein_coding	-	CCDS21249.1	2	657	0	1.43	0.5	44.8	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000001988	Npas1	ENSMUST00000210748	ENSMUSP00000147412	TRANSLATION	protein_coding	-	CCDS20850.1	1	594	0	8.75	2.7	113.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001988	Npas1	ENSMUST00000211695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001988	Npas1	ENSMUST00000002053	ENSMUSP00000002053	TRANSLATION	protein_coding	-	CCDS20850.1	5	594	0	8.75	2.7	113.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001988	Npas1	ENSMUST00000211103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030498	Gas2	ENSMUST00000132335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030498	Gas2	ENSMUST00000208711	ENSMUSP00000146537	TRANSLATION	protein_coding	-	CCDS21310.1	1	314	4	2.6	13.7	151	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000030498	Gas2	ENSMUST00000155925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030498	Gas2	ENSMUST00000051912	ENSMUSP00000053514	TRANSLATION	protein_coding	-	CCDS21310.1	1	314	4	2.6	13.7	151	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000030498	Gas2	ENSMUST00000107591	ENSMUSP00000103217	TRANSLATION	protein_coding	-	CCDS21310.1	1	314	4	2.6	13.7	151	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000030498	Gas2	ENSMUST00000145049	ENSMUSP00000117367	TRANSLATION	protein_coding	stop	-	2	185	0	0	0	55.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030498	Gas2	ENSMUST00000129604	ENSMUSP00000114743	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030498	Gas2	ENSMUST00000145723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030498	Gas2	ENSMUST00000107589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070427	Il18bp	ENSMUST00000209844	ENSMUSP00000148080	TRANSLATION	protein_coding	-	CCDS21522.1	1	193	0	0.93	1.5	0	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000070427	Il18bp	ENSMUST00000094134	ENSMUSP00000091685	TRANSLATION	protein_coding	-	CCDS21522.1	1	193	0	0.93	1.5	0	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000070427	Il18bp	ENSMUST00000209368	ENSMUSP00000148201	TRANSLATION	protein_coding	-	-	1	194	0	0.93	0.5	0	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000070427	Il18bp	ENSMUST00000211502	ENSMUSP00000147912	TRANSLATION	protein_coding	stop	-	3	137	0	0.48	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000036862	Dchs1	ENSMUST00000154659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036862	Dchs1	ENSMUST00000078482	ENSMUSP00000077574	TRANSLATION	protein_coding	-	CCDS52351.1	5	3291	222	8.58	2.7	1316.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000036862	Dchs1	ENSMUST00000140959	ENSMUSP00000147857	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094822	Olfr243	ENSMUST00000215723	ENSMUSP00000150329	TRANSLATION	protein_coding	-	CCDS21586.1	5	316	0	0.36	2.7	349.1	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094822	Olfr243	ENSMUST00000098194	ENSMUSP00000095796	TRANSLATION	protein_coding	-	CCDS21586.1	-	316	0	0.36	2.7	349.1	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030741	Spns1	ENSMUST00000152000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030741	Spns1	ENSMUST00000119754	ENSMUSP00000112555	TRANSLATION	protein_coding	-	-	5	453	0	2.03	0	114.8	20	-4,-6	-	-	11.364	MINOR
ENSMUSG00000030741	Spns1	ENSMUST00000205366	ENSMUSP00000145761	TRANSLATION	nonsense_mediated_decay	-	-	5	167	0	0.9	0	39.1	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000030741	Spns1	ENSMUST00000206094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030741	Spns1	ENSMUST00000032994	ENSMUSP00000032994	TRANSLATION	protein_coding	-	CCDS21826.1	1	528	0	2.03	5.1	113.9	23	-4,-6	-	-	13.31	PRINCIPAL:1
ENSMUSG00000030741	Spns1	ENSMUST00000150748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030741	Spns1	ENSMUST00000205930	ENSMUSP00000146172	TRANSLATION	protein_coding	start/stop	-	5	262	0	2.03	0	83.6	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000030741	Spns1	ENSMUST00000137263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030741	Spns1	ENSMUST00000206377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030741	Spns1	ENSMUST00000138141	ENSMUSP00000117803	TRANSLATION	nonsense_mediated_decay	-	-	1	165	0	0.9	0	39.8	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000030741	Spns1	ENSMUST00000126810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030741	Spns1	ENSMUST00000150476	ENSMUSP00000115152	TRANSLATION	protein_coding	stop	-	5	239	0	2.27	0	104.4	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000030741	Spns1	ENSMUST00000119846	ENSMUSP00000112954	TRANSLATION	protein_coding	-	-	5	476	0	2.03	1.2	102.8	21	-4,-6	-	-	10.742	MINOR
ENSMUSG00000074170	Plekhf1	ENSMUST00000098513	ENSMUSP00000096113	TRANSLATION	protein_coding	-	CCDS21158.1	1	279	6	0.36	5.1	100.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000070828	Zscan4f	ENSMUST00000141491	ENSMUSP00000122083	TRANSLATION	protein_coding	stop	-	2	77	0	0	0	24.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070828	Zscan4f	ENSMUST00000145237	ENSMUSP00000120149	TRANSLATION	protein_coding	-	CCDS52015.1	1	506	15	0.2	0.5	112.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090342	Vmn2r46	ENSMUST00000171523	ENSMUSP00000126863	TRANSLATION	protein_coding	-	CCDS52004.1	5	809	0	2.86	0.5	352.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000090342	Vmn2r46	ENSMUST00000235334	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000094107	Vmn2r47	ENSMUST00000170131	ENSMUSP00000130160	TRANSLATION	protein_coding	-	CCDS52005.1	5	852	0	2.68	1.5	375.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000073952	Olfr597	ENSMUST00000098203	ENSMUSP00000095804	TRANSLATION	protein_coding	-	CCDS52336.1	-	315	0	0.42	5.1	298.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073952	Olfr597	ENSMUST00000216456	ENSMUSP00000150238	TRANSLATION	protein_coding	-	CCDS52336.1	5	315	0	0.42	5.1	298.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070808	Bicra	ENSMUST00000209251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070808	Bicra	ENSMUST00000210713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070808	Bicra	ENSMUST00000210781	ENSMUSP00000148012	TRANSLATION	protein_coding	-	CCDS39780.1	5	1578	0	0	1.5	115.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070808	Bicra	ENSMUST00000094821	ENSMUSP00000092416	TRANSLATION	protein_coding	-	CCDS39780.1	5	1578	0	0	1.5	115.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039391	Ccdc81	ENSMUST00000041195	ENSMUSP00000044087	TRANSLATION	protein_coding	-	CCDS52306.1	1	654	0	0	1.5	153.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000039391	Ccdc81	ENSMUST00000131966	ENSMUSP00000117788	TRANSLATION	nonsense_mediated_decay	-	-	1	194	0	0	0	153.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030753	Thap12	ENSMUST00000146473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030753	Thap12	ENSMUST00000033009	ENSMUSP00000033009	TRANSLATION	protein_coding	-	CCDS21474.1	1	758	5	1.88	1.5	112.2	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000030753	Thap12	ENSMUST00000126356	ENSMUSP00000118403	TRANSLATION	nonsense_mediated_decay	-	-	3	79	5	1.28	0	54.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030753	Thap12	ENSMUST00000153566	ENSMUSP00000118736	TRANSLATION	nonsense_mediated_decay	-	-	3	120	5	1.88	0	66.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096145	Vkorc1	ENSMUST00000206053	ENSMUSP00000145795	TRANSLATION	protein_coding	-	-	3	112	0	0	0	52.3	4	-4,-7	-	-	3.348	MINOR
ENSMUSG00000096145	Vkorc1	ENSMUST00000119922	ENSMUSP00000112542	TRANSLATION	protein_coding	-	-	3	93	0	0	0	52.3	4	-4,-5	-	-	3.348	MINOR
ENSMUSG00000096145	Vkorc1	ENSMUST00000033074	ENSMUSP00000033074	TRANSLATION	protein_coding	-	CCDS21883.1	1	161	0	0	6.3	93.8	4	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000059031	Olfr482	ENSMUST00000081184	ENSMUSP00000079948	TRANSLATION	protein_coding	-	CCDS21704.1	-	323	0	0	1.5	174.7	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000059031	Olfr482	ENSMUST00000217304	ENSMUSP00000150755	TRANSLATION	protein_coding	-	CCDS21704.1	5	323	0	0	1.5	174.7	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030822	Prr14	ENSMUST00000033095	ENSMUSP00000033095	TRANSLATION	protein_coding	-	CCDS21868.1	1	612	0	0	0.5	80.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030822	Prr14	ENSMUST00000133817	ENSMUSP00000146250	TRANSLATION	protein_coding	stop	-	2	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030822	Prr14	ENSMUST00000206915	ENSMUSP00000145988	TRANSLATION	protein_coding	start	-	1	185	0	0	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030822	Prr14	ENSMUST00000106292	ENSMUSP00000101899	TRANSLATION	protein_coding	-	CCDS21868.1	5	612	0	0	0.5	80.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000030822	Prr14	ENSMUST00000128805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030822	Prr14	ENSMUST00000132124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030822	Prr14	ENSMUST00000206118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030822	Prr14	ENSMUST00000147202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030822	Prr14	ENSMUST00000132819	ENSMUSP00000146235	TRANSLATION	nonsense_mediated_decay	start	-	3	128	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030822	Prr14	ENSMUST00000142532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030822	Prr14	ENSMUST00000133938	ENSMUSP00000117195	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030859	Fam24a	ENSMUST00000207784	ENSMUSP00000146579	TRANSLATION	protein_coding	-	CCDS40158.1	1	98	0	0	1.5	108.6	1	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030859	Fam24a	ENSMUST00000207439	ENSMUSP00000146929	TRANSLATION	protein_coding	-	CCDS40158.1	5	98	0	0	1.5	108.6	1	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030859	Fam24a	ENSMUST00000084505	ENSMUSP00000081551	TRANSLATION	protein_coding	-	CCDS40158.1	1	98	0	0	1.5	108.6	1	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000099216	Obox8	ENSMUST00000184356	ENSMUSP00000138898	TRANSLATION	protein_coding	-	-	5	217	0	0.68	0	62.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031024	Denn2b	ENSMUST00000084738	ENSMUSP00000081789	TRANSLATION	protein_coding	-	CCDS21735.1	5	717	0	3.565	8.1	305.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031024	Denn2b	ENSMUST00000208583	ENSMUSP00000146747	TRANSLATION	protein_coding	stop	-	3	101	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000168005	ENSMUSP00000130119	TRANSLATION	protein_coding	-	CCDS21735.1	5	717	0	3.565	8.1	305.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031024	Denn2b	ENSMUST00000208557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031024	Denn2b	ENSMUST00000077909	ENSMUSP00000077067	TRANSLATION	protein_coding	-	CCDS21734.1	1	1134	0	3.565	5.1	305.7	0	-4,-7	-	-	13.731	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000079282	ENSMUSP00000078264	TRANSLATION	protein_coding	-	CCDS21734.1	5	1134	0	3.565	5.1	305.7	0	-4,-7	-	-	13.731	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000208734	ENSMUSP00000146829	TRANSLATION	protein_coding	stop	-	2	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000207394	ENSMUSP00000146549	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000207745	ENSMUSP00000146934	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031024	Denn2b	ENSMUST00000208981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031024	Denn2b	ENSMUST00000207664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034951	Cog7	ENSMUST00000148634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034951	Cog7	ENSMUST00000205438	ENSMUSP00000146193	TRANSLATION	protein_coding	-	-	1	721	0	0	0	1070.7	0	-4,-5	-	-	0.738	MINOR
ENSMUSG00000034951	Cog7	ENSMUST00000206817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034951	Cog7	ENSMUST00000057576	ENSMUSP00000058990	TRANSLATION	protein_coding	-	CCDS21805.1	1	770	0	0	10.8	1158.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000052974	Cyp2f2	ENSMUST00000003100	ENSMUSP00000003100	TRANSLATION	protein_coding	-	CCDS21010.1	1	491	32	10.05	5.1	507.2	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000052974	Cyp2f2	ENSMUST00000206552	ENSMUSP00000146037	TRANSLATION	protein_coding	start/stop	-	3	208	12	4.75	0	174	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052974	Cyp2f2	ENSMUST00000133841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074220	Zfp382	ENSMUST00000153792	ENSMUSP00000123508	TRANSLATION	protein_coding	stop	-	2	87	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074220	Zfp382	ENSMUST00000156543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074220	Zfp382	ENSMUST00000098596	ENSMUSP00000096196	TRANSLATION	protein_coding	-	CCDS39877.1	1	579	36	1.6	0.5	281.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000095931	Vmn1r159	ENSMUST00000167871	ENSMUSP00000129692	TRANSLATION	protein_coding	-	CCDS52121.1	-	305	0	0	1.5	54.2	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000033676	Gabrb3	ENSMUST00000039697	ENSMUSP00000038051	TRANSLATION	protein_coding	-	CCDS21324.1	1	473	5	7.5	6.3	326.1	3	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000033676	Gabrb3	ENSMUST00000196198	ENSMUSP00000143353	TRANSLATION	protein_coding	-	CCDS21323.1	1	473	5	7.5	2.9	326.1	3	3,-2	-	-	17.716	MINOR
ENSMUSG00000033676	Gabrb3	ENSMUST00000156375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033676	Gabrb3	ENSMUST00000085240	ENSMUSP00000082337	TRANSLATION	protein_coding	-	-	5	495	5	7.5	0	326.1	3	4,-1	-	-	17	MINOR
ENSMUSG00000033676	Gabrb3	ENSMUST00000136033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033676	Gabrb3	ENSMUST00000138350	ENSMUSP00000118835	TRANSLATION	protein_coding	start/stop	-	3	193	1	2.25	0	91.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000172764	ENSMUSP00000133810	TRANSLATION	nonsense_mediated_decay	start	-	5	128	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000152104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000136824	ENSMUSP00000133380	TRANSLATION	nonsense_mediated_decay	start	-	5	69	0	1.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000041097	ENSMUSP00000040321	TRANSLATION	protein_coding	-	CCDS21950.1	1	453	0	8.66	5.5	0	0	-4,-5	-	-	7.848	PRINCIPAL:1
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000140047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000148453	ENSMUSP00000119183	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000174090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000155672	ENSMUSP00000119004	TRANSLATION	protein_coding	-	CCDS85447.1	1	288	0	4.5	8.3	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000041769	Ppp2r2d	ENSMUST00000128157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030726	Pold3	ENSMUST00000032969	ENSMUSP00000032969	TRANSLATION	protein_coding	-	CCDS21493.1	1	461	0	4.96	1.5	417.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030726	Pold3	ENSMUST00000156518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030726	Pold3	ENSMUST00000130413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030726	Pold3	ENSMUST00000208184	ENSMUSP00000146986	TRANSLATION	protein_coding	stop	-	5	269	0	1.55	0	136.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030726	Pold3	ENSMUST00000127128	ENSMUSP00000115707	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	1.25	0	34.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030726	Pold3	ENSMUST00000156202	ENSMUSP00000146431	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	1.66	0	63.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030726	Pold3	ENSMUST00000123675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030726	Pold3	ENSMUST00000129556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030726	Pold3	ENSMUST00000208704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030726	Pold3	ENSMUST00000208670	ENSMUSP00000146603	TRANSLATION	protein_coding	-	-	5	422	0	3.71	1.7	360.2	0	-4,-5	-	-	6.054	MINOR
ENSMUSG00000066239	Olfr519	ENSMUST00000202706	ENSMUSP00000144271	TRANSLATION	protein_coding	-	CCDS80777.1	-	314	0	0.42	5.1	200.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066239	Olfr519	ENSMUST00000084752	ENSMUSP00000081804	TRANSLATION	protein_coding	start	-	-	319	0	0.42	0	200.4	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000057229	Dmac2	ENSMUST00000126925	ENSMUSP00000145736	TRANSLATION	nonsense_mediated_decay	start	-	3	94	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057229	Dmac2	ENSMUST00000205593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057229	Dmac2	ENSMUST00000085953	ENSMUSP00000083115	TRANSLATION	protein_coding	-	CCDS20988.1	1	257	0	1.37	0.5	0	0	-4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000057229	Dmac2	ENSMUST00000130897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057229	Dmac2	ENSMUST00000077338	ENSMUSP00000076563	TRANSLATION	protein_coding	-	CCDS71917.1	1	258	0	1.37	1.5	0	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000057229	Dmac2	ENSMUST00000147472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038187	Btbd10	ENSMUST00000129567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038187	Btbd10	ENSMUST00000047091	ENSMUSP00000048530	TRANSLATION	protein_coding	-	CCDS21755.1	1	475	0	0	12.8	169.1	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000038187	Btbd10	ENSMUST00000139650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038187	Btbd10	ENSMUST00000135510	ENSMUSP00000114806	TRANSLATION	nonsense_mediated_decay	-	-	5	202	0	0	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038187	Btbd10	ENSMUST00000117577	ENSMUSP00000113496	TRANSLATION	protein_coding	-	-	5	483	0	0	10.8	169.1	0	-4,-5	-	-	9.324	ALTERNATIVE:1
ENSMUSG00000038187	Btbd10	ENSMUST00000119278	ENSMUSP00000113632	TRANSLATION	protein_coding	-	-	5	427	0	0	10.8	169.1	0	-4,-2	-	-	9.324	ALTERNATIVE:1
ENSMUSG00000070552	Mrgprx1	ENSMUST00000094390	ENSMUSP00000091954	TRANSLATION	protein_coding	-	CCDS21299.1	1	322	0	0.36	1.5	26.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006948	Klk4	ENSMUST00000007161	ENSMUSP00000007161	TRANSLATION	protein_coding	-	CCDS21186.1	1	255	7	4	6.3	205.6	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000073948	Olfr608	ENSMUST00000213546	ENSMUSP00000150595	TRANSLATION	protein_coding	-	CCDS21575.1	-	316	0	0.36	3.9	334.4	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000030427	Lilra6	ENSMUST00000206851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030427	Lilra6	ENSMUST00000090689	ENSMUSP00000088188	TRANSLATION	protein_coding	-	-	1	625	0	6.75	0	87.2	0	2,-2	-	-	8.154	MINOR
ENSMUSG00000030427	Lilra6	ENSMUST00000206077	ENSMUSP00000145890	TRANSLATION	protein_coding	-	-	1	323	0	4	0	56.9	0	-4,-5	-	-	2.334	MINOR
ENSMUSG00000030427	Lilra6	ENSMUST00000038176	ENSMUSP00000042636	TRANSLATION	protein_coding	-	CCDS20728.1	1	663	0	7.75	1.5	118	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030427	Lilra6	ENSMUST00000131255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030965	Abraxas2	ENSMUST00000129552	ENSMUSP00000120309	TRANSLATION	nonsense_mediated_decay	start	-	1	160	0	2.3706	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030965	Abraxas2	ENSMUST00000134784	ENSMUSP00000147850	TRANSLATION	nonsense_mediated_decay	start	-	3	98	0	0.711	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030965	Abraxas2	ENSMUST00000210077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030965	Abraxas2	ENSMUST00000084497	ENSMUSP00000081541	TRANSLATION	protein_coding	-	CCDS21928.3	1	424	0	3.3906	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030965	Abraxas2	ENSMUST00000144225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030965	Abraxas2	ENSMUST00000147786	ENSMUSP00000116254	TRANSLATION	nonsense_mediated_decay	start	-	5	60	0	0.996	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030965	Abraxas2	ENSMUST00000138436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030965	Abraxas2	ENSMUST00000106161	ENSMUSP00000101767	TRANSLATION	protein_coding	start	-	1	289	0	3.3906	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030655	Smg1	ENSMUST00000208209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030655	Smg1	ENSMUST00000179847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030655	Smg1	ENSMUST00000178025	ENSMUSP00000136406	TRANSLATION	protein_coding	start	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030655	Smg1	ENSMUST00000180009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030655	Smg1	ENSMUST00000207162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030655	Smg1	ENSMUST00000032891	ENSMUSP00000032891	TRANSLATION	protein_coding	-	CCDS40102.1	5	3658	0	5.22	9.6	1066.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030655	Smg1	ENSMUST00000179331	ENSMUSP00000137592	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030655	Smg1	ENSMUST00000208025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030655	Smg1	ENSMUST00000179047	ENSMUSP00000137172	TRANSLATION	protein_coding	stop	-	5	335	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030655	Smg1	ENSMUST00000208930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049797	Olfr642	ENSMUST00000052660	ENSMUSP00000061462	TRANSLATION	protein_coding	-	CCDS21604.1	-	314	0	0.42	1.5	394.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049797	Olfr642	ENSMUST00000214299	ENSMUSP00000148961	TRANSLATION	protein_coding	-	CCDS21604.1	5	314	0	0.42	1.5	394.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038489	Polr2l	ENSMUST00000043870	ENSMUSP00000043204	TRANSLATION	protein_coding	-	CCDS52446.1	1	67	5	2	15	115.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000095910	Olfr469	ENSMUST00000213252	ENSMUSP00000150486	TRANSLATION	protein_coding	-	CCDS21693.1	5	314	0	0	2.7	177.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095910	Olfr469	ENSMUST00000216431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095910	Olfr469	ENSMUST00000075704	ENSMUSP00000075122	TRANSLATION	protein_coding	-	CCDS21693.1	-	314	0	0	2.7	177.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000053198	Prx	ENSMUST00000098644	ENSMUSP00000096241	TRANSLATION	protein_coding	-	CCDS21023.1	1	1391	0	2	0.5	28	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000053198	Prx	ENSMUST00000238936	ENSMUSP00000158878	TRANSLATION	protein_coding	-	CCDS21023.1	-	1391	0	2	0.5	28	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000053198	Prx	ENSMUST00000108355	ENSMUSP00000103992	TRANSLATION	protein_coding	-	CCDS39849.1	1	148	0	2	1.7	28	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000053198	Prx	ENSMUST00000238964	ENSMUSP00000159082	TRANSLATION	protein_coding	stop	-	-	1525	0	2	0	28	0	-3,0	-	-	-1	MINOR
ENSMUSG00000053198	Prx	ENSMUST00000065487	ENSMUSP00000066110	TRANSLATION	protein_coding	-	-	1	1391	0	2	0	28	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000053198	Prx	ENSMUST00000125990	ENSMUSP00000145598	TRANSLATION	protein_coding	-	-	1	1252	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036111	Lmo1	ENSMUST00000207178	ENSMUSP00000146752	TRANSLATION	protein_coding	-	CCDS85378.1	2	155	16	3	17.3	110.5	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000036111	Lmo1	ENSMUST00000036992	ENSMUSP00000037079	TRANSLATION	protein_coding	-	CCDS40080.1	1	156	16	3	17.3	110.5	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000036111	Lmo1	ENSMUST00000208136	ENSMUSP00000146588	TRANSLATION	protein_coding	-	CCDS85377.1	2	145	16	3	11.6	110.5	0	-4,-5	-	-	20.6	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000170635	ENSMUSP00000127999	TRANSLATION	protein_coding	stop	-	5	52	1	1.16	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000167298	ENSMUSP00000133142	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000169820	ENSMUSP00000131773	TRANSLATION	protein_coding	stop	-	3	93	1	2.16	0	71.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000167599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006154	Eps8l1	ENSMUST00000164987	ENSMUSP00000130665	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000168924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006154	Eps8l1	ENSMUST00000163137	ENSMUSP00000131345	TRANSLATION	nonsense_mediated_decay	-	-	2	109	1	2.16	0	72	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000163804	ENSMUSP00000133102	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000167068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006154	Eps8l1	ENSMUST00000086372	ENSMUSP00000083559	TRANSLATION	protein_coding	-	CCDS20736.1	1	716	2	8.016	2.7	190	0	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000006154	Eps8l1	ENSMUST00000171445	ENSMUSP00000133206	TRANSLATION	protein_coding	-	-	5	777	2	8.016	0.5	190	0	-4,-5	-	-	14	ALTERNATIVE:2
ENSMUSG00000006154	Eps8l1	ENSMUST00000167810	ENSMUSP00000126720	TRANSLATION	protein_coding	stop	-	5	152	2	3.49	0	144.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006154	Eps8l1	ENSMUST00000170423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006154	Eps8l1	ENSMUST00000163893	ENSMUSP00000125840	TRANSLATION	protein_coding	-	CCDS20736.1	1	716	2	8.016	2.7	190	0	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000019737	Syne4	ENSMUST00000176006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000176984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000175672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000175902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000176965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000054594	ENSMUSP00000055874	TRANSLATION	protein_coding	-	CCDS21086.1	1	388	0	0	1.5	45.1	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000019737	Syne4	ENSMUST00000176253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019737	Syne4	ENSMUST00000177257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019737	Syne4	ENSMUST00000176071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000177078	ENSMUSP00000135895	TRANSLATION	protein_coding	stop	-	5	237	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019737	Syne4	ENSMUST00000176571	ENSMUSP00000135558	TRANSLATION	protein_coding	start	-	2	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019737	Syne4	ENSMUST00000176536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000176789	ENSMUSP00000135474	TRANSLATION	nonsense_mediated_decay	start	-	2	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019737	Syne4	ENSMUST00000176232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019737	Syne4	ENSMUST00000177395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019737	Syne4	ENSMUST00000176504	ENSMUSP00000135844	TRANSLATION	protein_coding	stop	-	3	255	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019737	Syne4	ENSMUST00000176304	ENSMUSP00000135637	TRANSLATION	protein_coding	-	CCDS71929.1	5	305	0	0	1.5	45.1	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000070810	Sult2a6	ENSMUST00000076576	ENSMUSP00000075884	TRANSLATION	protein_coding	-	CCDS39773.1	1	285	20	6	2.9	265.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070810	Sult2a6	ENSMUST00000184731	ENSMUSP00000138842	TRANSLATION	protein_coding	-	-	1	130	9	2	0	65.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000015981	Stk32c	ENSMUST00000165870	ENSMUSP00000126638	TRANSLATION	protein_coding	-	CCDS52425.1	5	370	11	7.825	0.5	186.3	0	-4,-6	-	-	9.372	MINOR
ENSMUSG00000015981	Stk32c	ENSMUST00000016125	ENSMUSP00000016125	TRANSLATION	protein_coding	-	CCDS21952.1	1	488	19	8.655	1.5	213.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000051457	Spn	ENSMUST00000205483	ENSMUSP00000145637	TRANSLATION	protein_coding	start	-	2	140	0	0	0	0	0	2,-4	-	-	-1	MINOR
ENSMUSG00000051457	Spn	ENSMUST00000143713	ENSMUSP00000122787	TRANSLATION	nonsense_mediated_decay	-	-	1	395	0	0	0.5	0	1	4,-1	-	-	-1	MINOR
ENSMUSG00000051457	Spn	ENSMUST00000049931	ENSMUSP00000049534	TRANSLATION	protein_coding	-	CCDS21858.1	1	395	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000016626	Nlrp14	ENSMUST00000142623	ENSMUSP00000145427	TRANSLATION	protein_coding	-	-	1	334	0	5.464	0	63.7	0	-4,-6	-	-	3.09	MINOR
ENSMUSG00000016626	Nlrp14	ENSMUST00000084763	ENSMUSP00000081819	TRANSLATION	protein_coding	-	CCDS21688.1	1	993	7	6.92	0.5	198.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030800	Prss8	ENSMUST00000206568	ENSMUSP00000146313	TRANSLATION	nonsense_mediated_decay	-	-	3	62	0	0.764	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030800	Prss8	ENSMUST00000206124	ENSMUSP00000145904	TRANSLATION	protein_coding	-	CCDS40147.1	1	339	10	5.094	1.5	247	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030800	Prss8	ENSMUST00000032988	ENSMUSP00000032988	TRANSLATION	protein_coding	-	CCDS40147.1	1	339	10	5.094	1.5	247	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000037469	Acp7	ENSMUST00000159095	ENSMUSP00000146753	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037469	Acp7	ENSMUST00000159418	ENSMUSP00000146369	TRANSLATION	protein_coding	stop	-	3	140	0	0.678	0	67	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037469	Acp7	ENSMUST00000159560	ENSMUSP00000147133	TRANSLATION	protein_coding	-	-	3	438	9	5.523	2.9	223.7	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000037469	Acp7	ENSMUST00000162880	ENSMUSP00000146604	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000037469	Acp7	ENSMUST00000040112	ENSMUSP00000045437	TRANSLATION	protein_coding	-	CCDS21050.1	1	496	9	5.523	0.5	223.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000037469	Acp7	ENSMUST00000239470	ENSMUSP00000159320	TRANSLATION	protein_coding	-	-	-	438	9	5.523	2.9	223.7	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000094284	Vmn1r112	ENSMUST00000174538	ENSMUSP00000133944	TRANSLATION	protein_coding	-	CCDS52081.1	-	297	0	0	0.5	25.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060034	Ctf2	ENSMUST00000076091	ENSMUSP00000075459	TRANSLATION	protein_coding	-	CCDS21876.1	1	204	0	0.94	0.5	46.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000060034	Ctf2	ENSMUST00000206038	ENSMUSP00000145867	TRANSLATION	protein_coding	-	-	1	164	0	0.78	0	44.4	0	-4,-6	-	-	10.746	MINOR
ENSMUSG00000074311	Vmn1r139	ENSMUST00000173668	ENSMUSP00000133301	TRANSLATION	protein_coding	-	-	3	117	0	0	0	0	3	-4,-7	-	-	0	MINOR
ENSMUSG00000074311	Vmn1r139	ENSMUST00000169730	ENSMUSP00000127303	TRANSLATION	protein_coding	-	CCDS52107.1	-	297	0	0	0.5	26.1	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040026	Saa3	ENSMUST00000210913	ENSMUSP00000148151	TRANSLATION	protein_coding	-	-	3	61	0	1	0	0	0	4,-1	-	-	1.998	MINOR
ENSMUSG00000040026	Saa3	ENSMUST00000211660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040026	Saa3	ENSMUST00000006956	ENSMUSP00000006956	TRANSLATION	protein_coding	-	CCDS21282.1	1	122	0	3	0.5	175.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073950	Olfr599	ENSMUST00000098201	ENSMUSP00000095803	TRANSLATION	protein_coding	-	CCDS21568.1	-	315	0	0.42	6.4	314.7	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073950	Olfr599	ENSMUST00000214329	ENSMUSP00000149281	TRANSLATION	protein_coding	-	CCDS21568.1	5	315	0	0.42	6.4	314.7	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046179	E2f8	ENSMUST00000136142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046179	E2f8	ENSMUST00000151139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046179	E2f8	ENSMUST00000119223	ENSMUSP00000112883	TRANSLATION	protein_coding	-	CCDS39967.1	1	860	0	4	0.5	139.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046179	E2f8	ENSMUST00000058745	ENSMUSP00000056778	TRANSLATION	protein_coding	-	CCDS39967.1	1	860	0	4	0.5	139.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038637	Lrrc56	ENSMUST00000144008	ENSMUSP00000147342	TRANSLATION	protein_coding	stop	-	2	107	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038637	Lrrc56	ENSMUST00000070458	ENSMUSP00000063912	TRANSLATION	protein_coding	-	CCDS22004.1	1	552	0	2.81	1.5	27.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000038637	Lrrc56	ENSMUST00000209220	ENSMUSP00000147745	TRANSLATION	nonsense_mediated_decay	-	-	3	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038637	Lrrc56	ENSMUST00000047093	ENSMUSP00000048691	TRANSLATION	protein_coding	-	CCDS22004.1	1	552	0	2.81	1.5	27.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000038637	Lrrc56	ENSMUST00000084446	ENSMUSP00000081486	TRANSLATION	protein_coding	-	CCDS52440.1	1	412	0	2.81	1.5	27.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000038637	Lrrc56	ENSMUST00000144199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038637	Lrrc56	ENSMUST00000150141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040564	Apoc1	ENSMUST00000108451	ENSMUSP00000104091	TRANSLATION	protein_coding	-	CCDS39802.1	1	88	0	1.36	5.1	104.7	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000040564	Apoc1	ENSMUST00000207500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040564	Apoc1	ENSMUST00000045035	ENSMUSP00000045571	TRANSLATION	protein_coding	-	CCDS39802.1	1	88	0	1.36	5.1	104.7	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000040564	Apoc1	ENSMUST00000207978	ENSMUSP00000147008	TRANSLATION	protein_coding	-	-	3	29	0	0	0	0	0	2,-2	-	-	0	MINOR
ENSMUSG00000051965	Nanos2	ENSMUST00000063563	ENSMUSP00000069765	TRANSLATION	protein_coding	-	CCDS20883.1	-	136	8	0.6	1.5	91.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061787	Rps17	ENSMUST00000130487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061787	Rps17	ENSMUST00000134425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061787	Rps17	ENSMUST00000208054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061787	Rps17	ENSMUST00000080813	ENSMUSP00000079628	TRANSLATION	protein_coding	-	CCDS40006.1	1	135	0	3.5	21.5	233.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000061787	Rps17	ENSMUST00000138936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061787	Rps17	ENSMUST00000156346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037664	Cdkn1c	ENSMUST00000208118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037664	Cdkn1c	ENSMUST00000207910	ENSMUSP00000147142	TRANSLATION	protein_coding	start	-	3	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037664	Cdkn1c	ENSMUST00000167912	ENSMUSP00000128828	TRANSLATION	protein_coding	-	CCDS52463.1	1	348	0	0.42	0.5	50	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000037664	Cdkn1c	ENSMUST00000208137	ENSMUSP00000147116	TRANSLATION	protein_coding	start	-	2	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037664	Cdkn1c	ENSMUST00000037287	ENSMUSP00000037302	TRANSLATION	protein_coding	-	CCDS22040.1	1	335	0	0.42	0.5	50	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000052749	Trim30b	ENSMUST00000155961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052749	Trim30b	ENSMUST00000164410	ENSMUSP00000131747	TRANSLATION	protein_coding	-	-	1	203	13	1.8	0	78.4	0	-4,-5	-	-	18	PRINCIPAL:5
ENSMUSG00000052749	Trim30b	ENSMUST00000171830	ENSMUSP00000131288	TRANSLATION	protein_coding	-	CCDS52345.1	1	159	0	0.36	0.5	0	0	-4,-7	-	-	1.2	MINOR
ENSMUSG00000052749	Trim30b	ENSMUST00000209729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052749	Trim30b	ENSMUST00000145982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052749	Trim30b	ENSMUST00000106831	ENSMUSP00000102444	TRANSLATION	protein_coding	-	-	1	189	13	1.8	0	78.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030507	Dbx1	ENSMUST00000032717	ENSMUSP00000032717	TRANSLATION	protein_coding	-	CCDS21306.1	1	335	0	1	1.5	72.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055942	Obox7	ENSMUST00000069740	ENSMUSP00000069239	TRANSLATION	protein_coding	-	CCDS39775.1	1	218	0	0.8	0.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055942	Obox7	ENSMUST00000183424	ENSMUSP00000138871	TRANSLATION	protein_coding	stop	-	5	137	0	0	0	28.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055942	Obox7	ENSMUST00000183788	ENSMUSP00000138932	TRANSLATION	protein_coding	-	CCDS39775.1	1	218	0	0.8	0.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030510	Cers3	ENSMUST00000066475	ENSMUSP00000069238	TRANSLATION	protein_coding	-	CCDS52268.1	1	419	0	1.2	0.5	159.1	5	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030510	Cers3	ENSMUST00000208521	ENSMUSP00000146745	TRANSLATION	protein_coding	-	-	1	383	0	1.2	4.1	159.1	5	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000090219	4930516K23Rik	ENSMUST00000217217	ENSMUSP00000150133	TRANSLATION	protein_coding	-	CCDS21605.1	-	314	0	0.36	5.1	412.6	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000090219	4930516K23Rik	ENSMUST00000074064	ENSMUSP00000073707	TRANSLATION	protein_coding	-	CCDS21605.1	5	314	0	0.36	5.1	412.6	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030762	Aqp8	ENSMUST00000098056	ENSMUSP00000095664	TRANSLATION	protein_coding	-	CCDS72038.1	1	261	0	3.38	0.5	168.1	5	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000030762	Aqp8	ENSMUST00000033023	ENSMUSP00000033023	TRANSLATION	protein_coding	-	CCDS85406.1	1	260	0	3.38	0.5	168.1	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030762	Aqp8	ENSMUST00000206106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038292	Ccdc155	ENSMUST00000121017	ENSMUSP00000113616	TRANSLATION	protein_coding	-	CCDS21234.2	1	648	0	0	0.5	312.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000038292	Ccdc155	ENSMUST00000211277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025724	Sec11a	ENSMUST00000117383	ENSMUSP00000113601	TRANSLATION	protein_coding	-	-	2	190	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000025724	Sec11a	ENSMUST00000119980	ENSMUSP00000112425	TRANSLATION	protein_coding	-	-	2	170	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000025724	Sec11a	ENSMUST00000136556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025724	Sec11a	ENSMUST00000153053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025724	Sec11a	ENSMUST00000150049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025724	Sec11a	ENSMUST00000130981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025724	Sec11a	ENSMUST00000120285	ENSMUSP00000112944	TRANSLATION	protein_coding	-	-	3	247	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000025724	Sec11a	ENSMUST00000147813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025724	Sec11a	ENSMUST00000147881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025724	Sec11a	ENSMUST00000026818	ENSMUSP00000026818	TRANSLATION	protein_coding	-	CCDS21401.1	1	179	0	0	19.5	0	1	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000046431	Olfr518	ENSMUST00000217803	ENSMUSP00000151883	TRANSLATION	protein_coding	-	CCDS21729.1	5	333	0	0.3	0.5	201.2	7	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000046431	Olfr518	ENSMUST00000059617	ENSMUSP00000050503	TRANSLATION	protein_coding	-	CCDS21729.1	-	333	0	0.3	0.5	201.2	7	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031070	Mrgprf	ENSMUST00000033386	ENSMUSP00000033386	TRANSLATION	protein_coding	-	CCDS22056.1	1	343	0	0.76	6.3	36.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031070	Mrgprf	ENSMUST00000117718	ENSMUSP00000113822	TRANSLATION	protein_coding	-	-	1	77	0	0.2	0	0	0	-4,-6	-	-	1.578	MINOR
ENSMUSG00000025754	Agbl1	ENSMUST00000156166	ENSMUSP00000119721	TRANSLATION	protein_coding	-	CCDS85321.1	1	1122	5	3.74	0.5	44.9	0	-4,-5	-	-	17	PRINCIPAL:2
ENSMUSG00000025754	Agbl1	ENSMUST00000107442	ENSMUSP00000103066	TRANSLATION	protein_coding	-	-	2	766	5	3.74	0	44.9	0	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000025754	Agbl1	ENSMUST00000026854	ENSMUSP00000026854	TRANSLATION	protein_coding	-	-	2	651	4	3.14	0	44.6	0	-4,-7	-	-	14.758	MINOR
ENSMUSG00000060508	Nlrp9b	ENSMUST00000207805	ENSMUSP00000146427	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	24.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060508	Nlrp9b	ENSMUST00000137183	ENSMUSP00000115158	TRANSLATION	protein_coding	stop	-	5	241	11	2.52	0	151.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060508	Nlrp9b	ENSMUST00000117909	ENSMUSP00000113762	TRANSLATION	protein_coding	-	-	1	501	11	6.92	0	139.2	0	-4,-5	-	-	12.336	MINOR
ENSMUSG00000060508	Nlrp9b	ENSMUST00000073151	ENSMUSP00000072895	TRANSLATION	protein_coding	-	CCDS20920.1	1	1003	12	8.16	0.5	181.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000066372	Vmn2r65	ENSMUST00000233469	ENSMUSP00000156680	TRANSLATION	protein_coding	-	-	-	578	4	2.4	0	271.2	10	3,-2	-	-	9.106	MINOR
ENSMUSG00000066372	Vmn2r65	ENSMUST00000232823	ENSMUSP00000156585	TRANSLATION	nonsense_mediated_decay	-	-	-	65	0	0.14	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000066372	Vmn2r65	ENSMUST00000233024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066372	Vmn2r65	ENSMUST00000044583	ENSMUSP00000036551	TRANSLATION	protein_coding	-	CCDS52288.1	5	845	4	2.82	0.5	403.2	10	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000030657	Xylt1	ENSMUST00000160035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030657	Xylt1	ENSMUST00000032892	ENSMUSP00000032892	TRANSLATION	protein_coding	-	CCDS40101.1	1	953	0	1.84	1.5	401.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030657	Xylt1	ENSMUST00000161889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006315	Tmem147	ENSMUST00000208169	ENSMUSP00000146893	TRANSLATION	protein_coding	-	-	5	150	0	0	1.2	94.1	4	-4,-5	-	-	0.064	MINOR
ENSMUSG00000006315	Tmem147	ENSMUST00000207779	ENSMUSP00000146550	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	130.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006315	Tmem147	ENSMUST00000207955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006315	Tmem147	ENSMUST00000207296	ENSMUSP00000147083	TRANSLATION	protein_coding	-	-	3	231	0	0	0	212.3	7	-4,-6	-	-	5.238	MINOR
ENSMUSG00000006315	Tmem147	ENSMUST00000209065	ENSMUSP00000146918	TRANSLATION	protein_coding	-	-	2	175	0	0	1.2	137.5	8	-4,-7	-	-	0.814	MINOR
ENSMUSG00000006315	Tmem147	ENSMUST00000207263	ENSMUSP00000146763	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	71.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006315	Tmem147	ENSMUST00000006478	ENSMUSP00000006478	TRANSLATION	protein_coding	-	CCDS39890.1	1	224	0	0	13.3	225	8	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000051314	Ffar2	ENSMUST00000168528	ENSMUSP00000129398	TRANSLATION	protein_coding	-	CCDS21111.1	1	330	0	2.018	5.1	95.7	9	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000051314	Ffar2	ENSMUST00000163504	ENSMUSP00000127758	TRANSLATION	protein_coding	-	CCDS21111.1	2	330	0	2.018	5.1	95.7	9	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000051314	Ffar2	ENSMUST00000186059	ENSMUSP00000140484	TRANSLATION	protein_coding	stop	-	2	133	0	0.8	0	61.7	5	-1,-4	-	-	-1	MINOR
ENSMUSG00000051314	Ffar2	ENSMUST00000053156	ENSMUSP00000052600	TRANSLATION	protein_coding	-	CCDS21111.1	1	330	0	2.018	5.1	95.7	9	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000051314	Ffar2	ENSMUST00000186339	ENSMUSP00000140493	TRANSLATION	protein_coding	stop	-	2	182	0	1.598	0	77.2	7	-1,-4	-	-	-1	MINOR
ENSMUSG00000051314	Ffar2	ENSMUST00000186534	ENSMUSP00000140215	TRANSLATION	protein_coding	stop	-	2	142	0	0.998	0	68.6	6	-1,-4	-	-	-1	MINOR
ENSMUSG00000056856	Jakmip3	ENSMUST00000238324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056856	Jakmip3	ENSMUST00000166163	ENSMUSP00000130207	TRANSLATION	protein_coding	stop	-	5	667	0	0	0	283.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056856	Jakmip3	ENSMUST00000238616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056856	Jakmip3	ENSMUST00000106111	ENSMUSP00000101717	TRANSLATION	protein_coding	-	-	5	463	0	0	0	131.2	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056856	Jakmip3	ENSMUST00000209297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056856	Jakmip3	ENSMUST00000171843	ENSMUSP00000127468	TRANSLATION	protein_coding	start	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066979	Bub3	ENSMUST00000209131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066979	Bub3	ENSMUST00000208848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066979	Bub3	ENSMUST00000084502	ENSMUSP00000081547	TRANSLATION	protein_coding	-	CCDS40160.1	1	326	0	5.41	18.3	59.7	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000066979	Bub3	ENSMUST00000207736	ENSMUSP00000146670	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	1.4	0	17.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066979	Bub3	ENSMUST00000207231	ENSMUSP00000147045	TRANSLATION	protein_coding	stop	-	5	220	0	2.68	0	43.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066979	Bub3	ENSMUST00000207442	ENSMUSP00000146334	TRANSLATION	protein_coding	-	-	3	324	0	5.41	18.3	59.7	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000066979	Bub3	ENSMUST00000208571	ENSMUSP00000146881	TRANSLATION	protein_coding	-	-	5	184	0	2.266	0	43.4	0	-4,-5	-	-	4.362	MINOR
ENSMUSG00000035064	Eef2k	ENSMUST00000143279	ENSMUSP00000119567	TRANSLATION	protein_coding	stop	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035064	Eef2k	ENSMUST00000146482	ENSMUSP00000114782	TRANSLATION	protein_coding	start	-	5	185	0	2.64	0	21.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035064	Eef2k	ENSMUST00000143322	ENSMUSP00000115486	TRANSLATION	protein_coding	stop	-	2	164	7	0.65	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035064	Eef2k	ENSMUST00000106488	ENSMUSP00000102097	TRANSLATION	protein_coding	-	CCDS21796.1	1	724	21	6.08	5.1	216.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000035064	Eef2k	ENSMUST00000106487	ENSMUSP00000102096	TRANSLATION	protein_coding	start	-	3	140	0	1.7	0	8.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035064	Eef2k	ENSMUST00000047875	ENSMUSP00000046595	TRANSLATION	protein_coding	-	CCDS21796.1	1	724	21	6.08	5.1	216.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000035064	Eef2k	ENSMUST00000125828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035064	Eef2k	ENSMUST00000106489	ENSMUSP00000102098	TRANSLATION	protein_coding	-	CCDS21796.1	1	724	21	6.08	5.1	216.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000035064	Eef2k	ENSMUST00000128813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094950	Vmn2r66	ENSMUST00000232837	ENSMUSP00000156807	TRANSLATION	protein_coding	-	-	-	852	5	2.955	0	348.9	11	-4,-7	-	-	16.46	MINOR
ENSMUSG00000094950	Vmn2r66	ENSMUST00000233739	ENSMUSP00000156850	TRANSLATION	protein_coding	-	-	-	858	5	2.955	0	348.9	11	0,-4	-	-	16.46	MINOR
ENSMUSG00000094950	Vmn2r66	ENSMUST00000233111	ENSMUSP00000156875	TRANSLATION	nonsense_mediated_decay	-	-	-	69	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000094950	Vmn2r66	ENSMUST00000233725	ENSMUSP00000156675	TRANSLATION	protein_coding	-	-	-	845	5	3.12	0	352.4	11	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000094950	Vmn2r66	ENSMUST00000124773	ENSMUSP00000122645	TRANSLATION	protein_coding	-	CCDS21422.2	5	851	5	3.12	0.5	352.4	11	0,-4	-	-	17	PRINCIPAL:2
ENSMUSG00000046058	Eid2	ENSMUST00000059596	ENSMUSP00000062345	TRANSLATION	protein_coding	-	CCDS21038.1	-	236	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000025726	Slc28a1	ENSMUST00000026820	ENSMUSP00000026820	TRANSLATION	protein_coding	-	CCDS21402.1	1	648	10	6.58	5.1	361.1	12	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025726	Slc28a1	ENSMUST00000119083	ENSMUSP00000112421	TRANSLATION	protein_coding	-	CCDS21402.1	5	648	10	6.58	5.1	361.1	12	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000030689	Ino80e	ENSMUST00000125624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030689	Ino80e	ENSMUST00000206349	ENSMUSP00000146297	TRANSLATION	protein_coding	-	-	2	205	0	0	5.8	0	0	-4,-5	-	-	2.361	ALTERNATIVE:1
ENSMUSG00000030689	Ino80e	ENSMUST00000206090	ENSMUSP00000145964	TRANSLATION	protein_coding	start	-	3	81	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000106342	ENSMUSP00000101949	TRANSLATION	protein_coding	-	-	3	163	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000129812	ENSMUSP00000114606	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000132552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030689	Ino80e	ENSMUST00000106343	ENSMUSP00000101950	TRANSLATION	protein_coding	-	-	1	244	0	0	7.1	0	0	-4,-5	-	-	3	PRINCIPAL:3
ENSMUSG00000030689	Ino80e	ENSMUST00000205619	ENSMUSP00000146097	TRANSLATION	protein_coding	start	-	5	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000050833	ENSMUSP00000049851	TRANSLATION	protein_coding	-	CCDS21848.1	1	205	0	0	0.5	0	0	-3,-4	-	-	0	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000206968	ENSMUSP00000145893	TRANSLATION	protein_coding	stop	-	5	260	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000205958	ENSMUSP00000145764	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000154881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030689	Ino80e	ENSMUST00000205349	ENSMUSP00000145866	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030689	Ino80e	ENSMUST00000144056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030689	Ino80e	ENSMUST00000153764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048897	Zfp710	ENSMUST00000049680	ENSMUSP00000050577	TRANSLATION	protein_coding	-	CCDS52280.1	1	666	43	2	3.9	217	0	-4,-5	-	-	19	PRINCIPAL:4
ENSMUSG00000048897	Zfp710	ENSMUST00000206104	ENSMUSP00000145836	TRANSLATION	protein_coding	stop	-	2	31	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048897	Zfp710	ENSMUST00000206039	ENSMUSP00000146148	TRANSLATION	protein_coding	-	-	1	665	43	2	0	217	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048897	Zfp710	ENSMUST00000164056	ENSMUSP00000132361	TRANSLATION	protein_coding	-	CCDS52280.1	1	666	43	2	3.9	217	0	-4,-5	-	-	19	PRINCIPAL:4
ENSMUSG00000048897	Zfp710	ENSMUST00000166250	ENSMUSP00000129357	TRANSLATION	protein_coding	-	CCDS52279.1	1	645	43	2	0.5	217	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074366	Obox5	ENSMUST00000173053	ENSMUSP00000134618	TRANSLATION	protein_coding	stop	-	5	180	0	1.2	0	63.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074366	Obox5	ENSMUST00000098802	ENSMUSP00000096400	TRANSLATION	protein_coding	-	CCDS39777.1	1	291	0	1.2	0.5	63.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074366	Obox5	ENSMUST00000173455	ENSMUSP00000134468	TRANSLATION	protein_coding	stop	-	1	178	0	1.2	0	63.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051362	Olfr589	ENSMUST00000061055	ENSMUSP00000060166	TRANSLATION	protein_coding	-	CCDS21562.1	-	317	0	0.2	1.5	438.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051362	Olfr589	ENSMUST00000218483	ENSMUSP00000151739	TRANSLATION	protein_coding	-	CCDS21562.1	5	317	0	0.2	1.5	438.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030617	Ccdc83	ENSMUST00000040413	ENSMUSP00000047758	TRANSLATION	protein_coding	-	CCDS21446.1	1	305	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000030617	Ccdc83	ENSMUST00000207819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030617	Ccdc83	ENSMUST00000107220	ENSMUSP00000102838	TRANSLATION	protein_coding	-	-	2	250	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000030617	Ccdc83	ENSMUST00000107221	ENSMUSP00000102839	TRANSLATION	protein_coding	-	CCDS57561.1	1	408	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000042423	Fbrs	ENSMUST00000205432	ENSMUSP00000145783	TRANSLATION	protein_coding	-	-	5	980	0	0	0.5	237.7	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000042423	Fbrs	ENSMUST00000205696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042423	Fbrs	ENSMUST00000205967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042423	Fbrs	ENSMUST00000048896	ENSMUSP00000043682	TRANSLATION	protein_coding	-	CCDS52408.1	5	466	0	0	0.5	237.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000042423	Fbrs	ENSMUST00000206484	ENSMUSP00000145748	TRANSLATION	protein_coding	start/stop	-	5	364	0	0	0	153	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042423	Fbrs	ENSMUST00000205651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042423	Fbrs	ENSMUST00000205803	ENSMUSP00000145666	TRANSLATION	protein_coding	start/stop	-	5	254	0	0	0	237.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042423	Fbrs	ENSMUST00000206980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042423	Fbrs	ENSMUST00000206394	ENSMUSP00000146139	TRANSLATION	protein_coding	-	-	5	378	0	0	0	211.9	0	-4,-7	-	-	4.452	MINOR
ENSMUSG00000084262	Olfr588-ps1	ENSMUST00000210115	ENSMUSP00000147533	TRANSLATION	protein_coding	stop	-	-	304	0	0.2	0	387.4	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000084262	Olfr588-ps1	ENSMUST00000118682	ENSMUSP00000148130	TRANSLATION	protein_coding	-	-	5	313	0	0.2	7.1	392.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000009248	Ascl2	ENSMUST00000121862	ENSMUSP00000113012	TRANSLATION	protein_coding	-	-	-	195	0	0.2	0	61.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000009248	Ascl2	ENSMUST00000009392	ENSMUSP00000009392	TRANSLATION	protein_coding	-	CCDS40194.1	1	263	0	0.2	1.5	61.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000011382	Dhdh	ENSMUST00000011526	ENSMUSP00000011526	TRANSLATION	protein_coding	-	CCDS21247.1	1	333	20	7	2.7	82.6	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000011382	Dhdh	ENSMUST00000210440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011382	Dhdh	ENSMUST00000209450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095538	Gm21983	ENSMUST00000154724	ENSMUSP00000122859	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	131	0	2.8	0	41.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000038239	Hrc	ENSMUST00000085351	ENSMUSP00000082459	TRANSLATION	protein_coding	-	CCDS39950.1	1	738	9	0	0.5	34.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038239	Hrc	ENSMUST00000211327	ENSMUSP00000147299	TRANSLATION	protein_coding	-	-	5	78	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000040614	Nlrp9c	ENSMUST00000160514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040614	Nlrp9c	ENSMUST00000160277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040614	Nlrp9c	ENSMUST00000085944	ENSMUSP00000083106	TRANSLATION	protein_coding	-	CCDS39843.1	1	1004	5	6.98	0.5	206	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000040614	Nlrp9c	ENSMUST00000160948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040614	Nlrp9c	ENSMUST00000041845	ENSMUSP00000036041	TRANSLATION	protein_coding	-	-	1	876	5	5.212	0	188.2	0	-4,-5	-	-	12.398	MINOR
ENSMUSG00000048065	Cyb5r2	ENSMUST00000208217	ENSMUSP00000146504	TRANSLATION	protein_coding	-	CCDS85373.1	1	276	18	7	1.5	236.5	0	-4,-5	-	-	17.838	ALTERNATIVE:2
ENSMUSG00000048065	Cyb5r2	ENSMUST00000052438	ENSMUSP00000050061	TRANSLATION	protein_coding	-	CCDS57579.1	1	292	18	7.08	0.5	236.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000025512	Chid1	ENSMUST00000118694	ENSMUSP00000112891	TRANSLATION	protein_coding	-	-	1	307	0	8.58	0.5	0	0	3,-2	-	-	1.998	MINOR
ENSMUSG00000025512	Chid1	ENSMUST00000166082	ENSMUSP00000130360	TRANSLATION	protein_coding	-	CCDS52447.1	1	396	0	10.58	5.1	70.6	0	3,-2	-	-	13.548	PRINCIPAL:2
ENSMUSG00000025512	Chid1	ENSMUST00000153191	ENSMUSP00000114693	TRANSLATION	protein_coding	-	-	1	393	0	10.58	6.3	70.6	0	3,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000025512	Chid1	ENSMUST00000155305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025512	Chid1	ENSMUST00000209452	ENSMUSP00000147938	TRANSLATION	nonsense_mediated_decay	-	-	5	192	0	4.566	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025512	Chid1	ENSMUST00000064642	ENSMUSP00000065953	TRANSLATION	nonsense_mediated_decay	start	-	5	297	0	6.33	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025512	Chid1	ENSMUST00000133359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025512	Chid1	ENSMUST00000026586	ENSMUSP00000026586	TRANSLATION	protein_coding	-	CCDS22019.1	1	310	0	8.58	0.5	0	0	3,-2	-	-	1.998	MINOR
ENSMUSG00000025512	Chid1	ENSMUST00000147610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025512	Chid1	ENSMUST00000143561	ENSMUSP00000115174	TRANSLATION	protein_coding	stop	-	5	263	0	7.08	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030750	Nsmce1	ENSMUST00000138616	ENSMUSP00000118058	TRANSLATION	protein_coding	start/stop	-	3	200	0	3.75	0	68	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030750	Nsmce1	ENSMUST00000033006	ENSMUSP00000033006	TRANSLATION	protein_coding	-	CCDS21822.1	1	280	9	5.9	0.5	117	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030750	Nsmce1	ENSMUST00000149289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055629	B4galnt4	ENSMUST00000209546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055629	B4galnt4	ENSMUST00000210517	ENSMUSP00000147364	TRANSLATION	protein_coding	start	-	2	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055629	B4galnt4	ENSMUST00000048002	ENSMUSP00000039758	TRANSLATION	protein_coding	-	CCDS21998.1	1	1034	3	0	1.5	149.5	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000055629	B4galnt4	ENSMUST00000210203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055629	B4galnt4	ENSMUST00000211455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074141	Il4i1	ENSMUST00000149686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074141	Il4i1	ENSMUST00000149779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074141	Il4i1	ENSMUST00000118125	ENSMUSP00000113726	TRANSLATION	protein_coding	-	CCDS52236.1	2	638	34	4.898	0.5	273.1	0	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000074141	Il4i1	ENSMUST00000033015	ENSMUSP00000033015	TRANSLATION	protein_coding	-	CCDS21217.1	1	630	34	4.898	0.5	273.1	0	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000074141	Il4i1	ENSMUST00000133279	ENSMUSP00000133613	TRANSLATION	protein_coding	start	-	2	54	0	1.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074141	Il4i1	ENSMUST00000124695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002963	Pnkp	ENSMUST00000123015	ENSMUSP00000143862	TRANSLATION	nonsense_mediated_decay	-	-	1	180	0	3.5	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000126860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002963	Pnkp	ENSMUST00000139003	ENSMUSP00000143904	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	1.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000208385	ENSMUSP00000147079	TRANSLATION	nonsense_mediated_decay	start	-	5	80	1	2.25	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000154968	ENSMUSP00000115504	TRANSLATION	protein_coding	stop	-	5	34	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000098478	ENSMUSP00000096078	TRANSLATION	protein_coding	-	CCDS71955.1	1	486	12	12.58	0.5	141.7	0	-4,-1	-	-	8.694	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000200892	ENSMUSP00000144163	TRANSLATION	protein_coding	start/stop	-	2	151	0	2.58	0	37.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000152747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002963	Pnkp	ENSMUST00000208666	ENSMUSP00000147012	TRANSLATION	protein_coding	start/stop	-	5	255	11	6	0	125.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000201882	ENSMUSP00000144690	TRANSLATION	nonsense_mediated_decay	-	-	5	426	14	10.08	0	184.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000107876	ENSMUSP00000103508	TRANSLATION	protein_coding	-	CCDS39945.1	1	522	14	13.58	1.5	241.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000002963	Pnkp	ENSMUST00000144669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002963	Pnkp	ENSMUST00000145850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002963	Pnkp	ENSMUST00000155050	ENSMUSP00000144663	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	1.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000202646	ENSMUSP00000144484	TRANSLATION	non_stop_decay	start/stop	-	3	148	7	3.08	0	66	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000124168	ENSMUSP00000144330	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	1.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002963	Pnkp	ENSMUST00000003044	ENSMUSP00000003044	TRANSLATION	protein_coding	-	CCDS39945.1	1	522	14	13.58	1.5	241.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000051403	Ppp1r37	ENSMUST00000208678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051403	Ppp1r37	ENSMUST00000209190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051403	Ppp1r37	ENSMUST00000058444	ENSMUSP00000060233	TRANSLATION	protein_coding	-	CCDS20906.1	1	712	0	4.68	1.5	44.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047225	Olfr684	ENSMUST00000060893	ENSMUSP00000055880	TRANSLATION	protein_coding	-	CCDS21643.1	-	312	0	0.42	2.8	244.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047225	Olfr684	ENSMUST00000215744	ENSMUSP00000149904	TRANSLATION	protein_coding	-	CCDS21643.1	5	312	0	0.42	2.8	244.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047225	Olfr684	ENSMUST00000215552	ENSMUSP00000149627	TRANSLATION	protein_coding	-	CCDS21643.1	5	312	0	0.42	2.8	244.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047225	Olfr684	ENSMUST00000217136	ENSMUSP00000150107	TRANSLATION	protein_coding	-	CCDS21643.1	5	312	0	0.42	2.8	244.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090862	Rps13	ENSMUST00000206748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090862	Rps13	ENSMUST00000205548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090862	Rps13	ENSMUST00000205490	ENSMUSP00000146136	TRANSLATION	protein_coding	-	-	1	140	0	3.58	0	53.1	0	-4,-2	-	-	10.86	MINOR
ENSMUSG00000090862	Rps13	ENSMUST00000206963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090862	Rps13	ENSMUST00000170953	ENSMUSP00000126294	TRANSLATION	protein_coding	-	CCDS52370.1	1	151	0	3.91	21.5	57.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000090862	Rps13	ENSMUST00000206712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090862	Rps13	ENSMUST00000205906	ENSMUSP00000146272	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	1.58	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000090862	Rps13	ENSMUST00000205265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045581	Olfr710	ENSMUST00000055923	ENSMUSP00000062956	TRANSLATION	protein_coding	-	CCDS21680.1	5	310	0	0.42	5.1	178.7	0	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062044	Lmtk3	ENSMUST00000233503	ENSMUSP00000156458	TRANSLATION	protein_coding	-	-	-	1446	19	5.68	0	211.8	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000062044	Lmtk3	ENSMUST00000211309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062044	Lmtk3	ENSMUST00000209701	ENSMUSP00000147480	TRANSLATION	protein_coding	stop	-	3	202	9	2.23	0	42.7	1	3,-2	-	-	-1	MINOR
ENSMUSG00000062044	Lmtk3	ENSMUST00000211609	ENSMUSP00000148070	TRANSLATION	protein_coding	stop	-	3	161	6	1	0	0	1	3,-2	-	-	-1	MINOR
ENSMUSG00000062044	Lmtk3	ENSMUST00000072580	ENSMUSP00000072388	TRANSLATION	protein_coding	-	CCDS39961.1	1	1424	19	5.68	1.5	211.8	1	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000062044	Lmtk3	ENSMUST00000211127	ENSMUSP00000148018	TRANSLATION	nonsense_mediated_decay	start	-	3	77	2	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062044	Lmtk3	ENSMUST00000209617	ENSMUSP00000148041	TRANSLATION	protein_coding	-	-	1	1450	19	5.68	1.5	211.8	1	0,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000062044	Lmtk3	ENSMUST00000120005	ENSMUSP00000112592	TRANSLATION	protein_coding	-	CCDS39961.1	1	1424	19	5.68	1.5	211.8	1	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000062044	Lmtk3	ENSMUST00000209351	ENSMUSP00000147390	TRANSLATION	nonsense_mediated_decay	start	-	5	144	3	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030909	Anks4b	ENSMUST00000033201	ENSMUSP00000033201	TRANSLATION	protein_coding	-	CCDS21793.1	1	423	0	1.4	0.5	91.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109659	Olfr605	ENSMUST00000215417	ENSMUSP00000151125	TRANSLATION	protein_coding	-	CCDS21573.1	5	314	0	0.2	4	346.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000109659	Olfr605	ENSMUST00000080660	ENSMUSP00000079489	TRANSLATION	protein_coding	-	CCDS21573.1	-	314	0	0.2	4	346.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000051811	Cox6b2	ENSMUST00000182173	ENSMUSP00000138288	TRANSLATION	protein_coding	-	-	2	104	0	1.73	0	54.1	0	-4,-7	-	-	9.612	MINOR
ENSMUSG00000051811	Cox6b2	ENSMUST00000182048	ENSMUSP00000138765	TRANSLATION	protein_coding	-	CCDS39738.1	1	88	0	2.23	6.3	65.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051811	Cox6b2	ENSMUST00000063324	ENSMUSP00000064988	TRANSLATION	protein_coding	-	CCDS39738.1	1	88	0	2.23	6.3	65.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051811	Cox6b2	ENSMUST00000182738	ENSMUSP00000138744	TRANSLATION	protein_coding	-	CCDS80657.1	2	88	0	1.4	0.5	31.6	0	-4,-6	-	-	6.66	MINOR
ENSMUSG00000051811	Cox6b2	ENSMUST00000183334	ENSMUSP00000138708	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051811	Cox6b2	ENSMUST00000184143	ENSMUSP00000139239	TRANSLATION	protein_coding	-	CCDS80658.1	2	60	0	1.4	0.5	33.3	0	-4,-6	-	-	6.816	MINOR
ENSMUSG00000051811	Cox6b2	ENSMUST00000182111	ENSMUSP00000138709	TRANSLATION	protein_coding	-	CCDS39738.1	1	88	0	2.23	6.3	65.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051811	Cox6b2	ENSMUST00000183971	ENSMUSP00000138911	TRANSLATION	protein_coding	-	-	5	78	0	1.9	1	30.1	0	-4,-6	-	-	7.872	MINOR
ENSMUSG00000051811	Cox6b2	ENSMUST00000182272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064158	Izumo1	ENSMUST00000033100	ENSMUSP00000033100	TRANSLATION	protein_coding	-	CCDS21255.1	1	397	0	5.58	0.5	309.2	0	0,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000064158	Izumo1	ENSMUST00000209590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062042	Olfr294	ENSMUST00000078588	ENSMUSP00000077662	TRANSLATION	protein_coding	-	CCDS21433.1	-	335	0	0.2	1.5	129.6	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053719	Klk1b26	ENSMUST00000048945	ENSMUSP00000047488	TRANSLATION	protein_coding	-	CCDS39938.1	1	261	7	4.3	0.5	230.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000015721	Nlrp5	ENSMUST00000108441	ENSMUSP00000104080	TRANSLATION	protein_coding	-	CCDS85233.1	1	1085	5	7.03	0.5	199.6	0	-4,-5	-	-	14.216	MINOR
ENSMUSG00000015721	Nlrp5	ENSMUST00000139661	ENSMUSP00000118638	TRANSLATION	nonsense_mediated_decay	-	-	1	727	5	0.28	0	148.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015721	Nlrp5	ENSMUST00000207536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015721	Nlrp5	ENSMUST00000015866	ENSMUSP00000015866	TRANSLATION	protein_coding	-	CCDS20930.1	1	1111	5	7.96	0.5	215	0	-4,-5	-	-	17	PRINCIPAL:4
ENSMUSG00000015721	Nlrp5	ENSMUST00000133237	ENSMUSP00000122007	TRANSLATION	nonsense_mediated_decay	-	-	1	989	5	5.28	0	179.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015721	Nlrp5	ENSMUST00000086341	ENSMUSP00000083524	TRANSLATION	protein_coding	-	CCDS20929.1	1	1095	5	7.96	0.5	215	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000015149	Sirt2	ENSMUST00000207322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015149	Sirt2	ENSMUST00000127953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015149	Sirt2	ENSMUST00000153956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015149	Sirt2	ENSMUST00000170068	ENSMUSP00000132783	TRANSLATION	protein_coding	-	CCDS52165.1	5	319	27	8.88	2.9	196.4	0	-3,-5	-	-	14.714	MINOR
ENSMUSG00000015149	Sirt2	ENSMUST00000141077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015149	Sirt2	ENSMUST00000122915	ENSMUSP00000147217	TRANSLATION	protein_coding	-	CCDS85253.1	1	352	27	9.55	6.3	196.4	0	-4,-5	-	-	17.342	MINOR
ENSMUSG00000015149	Sirt2	ENSMUST00000072965	ENSMUSP00000072732	TRANSLATION	protein_coding	-	CCDS21055.1	1	389	27	10.88	6.3	196.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000015149	Sirt2	ENSMUST00000128961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015149	Sirt2	ENSMUST00000155327	ENSMUSP00000146462	TRANSLATION	protein_coding	-	-	5	351	27	9.55	6.3	196.4	0	-4,-5	-	-	17.342	MINOR
ENSMUSG00000015149	Sirt2	ENSMUST00000132789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030917	Tmem159	ENSMUST00000155330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030917	Tmem159	ENSMUST00000118737	ENSMUSP00000114085	TRANSLATION	protein_coding	-	CCDS21791.1	5	161	0	0	6.3	77.4	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000030917	Tmem159	ENSMUST00000033210	ENSMUSP00000033210	TRANSLATION	protein_coding	-	CCDS21791.1	1	161	0	0	6.3	77.4	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000030917	Tmem159	ENSMUST00000208968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025466	Fuom	ENSMUST00000142105	ENSMUSP00000115799	TRANSLATION	protein_coding	start	-	3	156	9	4.16	0	112.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000025466	Fuom	ENSMUST00000125421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025466	Fuom	ENSMUST00000143197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025466	Fuom	ENSMUST00000155777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025466	Fuom	ENSMUST00000138197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025466	Fuom	ENSMUST00000147713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025466	Fuom	ENSMUST00000133834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025466	Fuom	ENSMUST00000211677	ENSMUSP00000148261	TRANSLATION	nonsense_mediated_decay	start	-	3	55	4	1.6856	0	49.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000025466	Fuom	ENSMUST00000120034	ENSMUSP00000112429	TRANSLATION	protein_coding	-	-	3	134	7	4.16	2.4	111.7	0	-3,-6	-	-	13.546	MINOR
ENSMUSG00000025466	Fuom	ENSMUST00000121115	ENSMUSP00000112970	TRANSLATION	protein_coding	-	-	1	127	5	3.41	0	80.2	0	-3,-6	-	-	8.136	MINOR
ENSMUSG00000025466	Fuom	ENSMUST00000026539	ENSMUSP00000026539	TRANSLATION	protein_coding	-	CCDS40173.1	1	153	10	4.91	5.1	139	0	-3,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025466	Fuom	ENSMUST00000132582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025466	Fuom	ENSMUST00000128527	ENSMUSP00000118717	TRANSLATION	protein_coding	start	-	1	109	6	3.2	0	68.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025466	Fuom	ENSMUST00000148716	ENSMUSP00000120353	TRANSLATION	nonsense_mediated_decay	-	-	1	133	7	4.16	2.4	111.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000046438	Scgb2b24	ENSMUST00000055444	ENSMUSP00000052456	TRANSLATION	protein_coding	-	CCDS21132.1	1	112	0	1.3	0.5	98.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030806	Stx1b	ENSMUST00000106267	ENSMUSP00000101874	TRANSLATION	protein_coding	-	CCDS40146.1	1	288	0	8.16	14.3	293.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030806	Stx1b	ENSMUST00000156135	ENSMUSP00000145698	TRANSLATION	protein_coding	start	-	5	139	0	3.08	0	156.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047545	Olfr629	ENSMUST00000213906	ENSMUSP00000150688	TRANSLATION	protein_coding	-	CCDS21588.1	5	314	0	0	6.4	342.8	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047545	Olfr629	ENSMUST00000216300	ENSMUSP00000149272	TRANSLATION	protein_coding	-	CCDS21588.1	5	314	0	0	6.4	342.8	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047545	Olfr629	ENSMUST00000051346	ENSMUSP00000052662	TRANSLATION	protein_coding	-	CCDS21588.1	-	314	0	0	6.4	342.8	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037239	Spred3	ENSMUST00000048923	ENSMUSP00000046216	TRANSLATION	protein_coding	-	CCDS21065.1	1	408	0	1.8	6.3	125.2	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000037239	Spred3	ENSMUST00000130390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037239	Spred3	ENSMUST00000207778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037239	Spred3	ENSMUST00000208659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107023	Gm42715	ENSMUST00000206825	ENSMUSP00000146316	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	254	0	0	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000107023	Gm42715	ENSMUST00000189629	ENSMUSP00000139644	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	3095	0	7.9	0	366.1	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000070459	Olfr290	ENSMUST00000214501	ENSMUSP00000149411	TRANSLATION	protein_coding	-	CCDS21421.1	5	315	0	0.42	2.7	178	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070459	Olfr290	ENSMUST00000216367	ENSMUSP00000149523	TRANSLATION	protein_coding,RT	-	CCDS21421.1	5	315	0	0.42	2.7	178	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000070459	Olfr290	ENSMUST00000216184	ENSMUSP00000149113	TRANSLATION	nonsense_mediated_decay	-	-	5	315	0	0.42	2.7	178	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000045114	Prrt2	ENSMUST00000161931	ENSMUSP00000143833	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000045114	Prrt2	ENSMUST00000202936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045114	Prrt2	ENSMUST00000201963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045114	Prrt2	ENSMUST00000160767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045114	Prrt2	ENSMUST00000159916	ENSMUSP00000124520	TRANSLATION	protein_coding	-	CCDS52405.1	5	346	0	0	1.5	82.7	2	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045114	Prrt2	ENSMUST00000201686	ENSMUSP00000144451	TRANSLATION	protein_coding	start/stop	-	3	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045114	Prrt2	ENSMUST00000202045	ENSMUSP00000144042	TRANSLATION	protein_coding	-	-	5	61	0	0	0	63.8	1	-4,-7	-	-	4.626	MINOR
ENSMUSG00000066568	Lsm14a	ENSMUST00000205455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066568	Lsm14a	ENSMUST00000206830	ENSMUSP00000145807	TRANSLATION	protein_coding	start	-	3	124	0	1.5192	0	51.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066568	Lsm14a	ENSMUST00000206388	ENSMUSP00000145972	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066568	Lsm14a	ENSMUST00000155256	ENSMUSP00000118766	TRANSLATION	protein_coding	stop	-	5	287	0	2	0	164.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066568	Lsm14a	ENSMUST00000133046	ENSMUSP00000119461	TRANSLATION	protein_coding	stop	-	5	175	0	1	0	52.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066568	Lsm14a	ENSMUST00000206715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066568	Lsm14a	ENSMUST00000085585	ENSMUSP00000082723	TRANSLATION	protein_coding	-	CCDS21140.1	1	462	0	3.5192	5.1	224.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066568	Lsm14a	ENSMUST00000205519	ENSMUSP00000145883	TRANSLATION	nonsense_mediated_decay	start	-	5	158	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096679	Olfr498	ENSMUST00000217616	ENSMUSP00000150971	TRANSLATION	protein_coding	-	CCDS21716.1	-	330	0	0	0.5	167.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040331	Nsmce4a	ENSMUST00000160289	ENSMUSP00000125300	TRANSLATION	protein_coding	-	CCDS52415.1	1	381	0	0	2.9	143.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040331	Nsmce4a	ENSMUST00000161470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040331	Nsmce4a	ENSMUST00000161076	ENSMUSP00000124794	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040331	Nsmce4a	ENSMUST00000161414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040331	Nsmce4a	ENSMUST00000207276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040331	Nsmce4a	ENSMUST00000162510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040331	Nsmce4a	ENSMUST00000159694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081945	Olfr607	ENSMUST00000214347	ENSMUSP00000154348	TRANSLATION	protein_coding	-	-	5	327	0	0.466	0.5	339.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000081945	Olfr607	ENSMUST00000119283	ENSMUSP00000153885	TRANSLATION	protein_coding	start/stop	-	-	305	0	0.4	0	338.5	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000177004	ENSMUSP00000135259	TRANSLATION	protein_coding	start	-	3	150	0	0	0	29.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000120007	ENSMUSP00000113647	TRANSLATION	protein_coding	-	-	1	272	0	0	1.2	68.5	4	-4,-7	-	-	6.094	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000032926	ENSMUSP00000032926	TRANSLATION	protein_coding	-	CCDS40133.1	1	240	0	0	5.3	68.5	4	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060538	Tmem219	ENSMUST00000145307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060538	Tmem219	ENSMUST00000154174	ENSMUSP00000115017	TRANSLATION	protein_coding	start	-	3	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000121612	ENSMUSP00000113260	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	29.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000137875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060538	Tmem219	ENSMUST00000119781	ENSMUSP00000114040	TRANSLATION	protein_coding	-	-	5	265	0	0	0.5	68.5	4	-4,-2	-	-	6	MINOR
ENSMUSG00000060538	Tmem219	ENSMUST00000121532	ENSMUSP00000112485	TRANSLATION	protein_coding	-	CCDS40133.1	1	240	0	0	5.3	68.5	4	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060538	Tmem219	ENSMUST00000134134	ENSMUSP00000116806	TRANSLATION	protein_coding	stop	-	2	221	0	0	0	68.5	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000096164	Vmn1r93	ENSMUST00000098747	ENSMUSP00000096343	TRANSLATION	protein_coding	-	CCDS20921.1	-	321	0	0	0.5	58.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000091692	4930433I11Rik	ENSMUST00000206529	ENSMUSP00000146117	TRANSLATION	protein_coding	-	-	5	723	0	0	1	191.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000091692	4930433I11Rik	ENSMUST00000171664	ENSMUSP00000131120	TRANSLATION	protein_coding	-	CCDS52207.1	1	632	0	0	0.5	191.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038663	Fsd2	ENSMUST00000042318	ENSMUSP00000047775	TRANSLATION	protein_coding	-	CCDS80743.1	2	716	4	3.88	0.5	110.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000054793	Cadm4	ENSMUST00000205820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054793	Cadm4	ENSMUST00000068023	ENSMUSP00000066880	TRANSLATION	protein_coding	-	CCDS20951.1	1	388	0	5.85	6.3	123.7	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055102	Zfp819	ENSMUST00000116324	ENSMUSP00000112026	TRANSLATION	protein_coding	-	CCDS21176.1	1	607	39	1.666	0.5	274.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055102	Zfp819	ENSMUST00000127765	ENSMUSP00000116658	TRANSLATION	protein_coding	stop	-	3	99	0	1.066	0	75.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055102	Zfp819	ENSMUST00000120935	ENSMUSP00000113867	TRANSLATION	protein_coding	-	-	1	531	39	0.6	0.5	199	0	-4,-5	-	-	9.648	MINOR
ENSMUSG00000055102	Zfp819	ENSMUST00000032661	ENSMUSP00000032661	TRANSLATION	protein_coding	-	CCDS21176.1	1	607	39	1.666	0.5	274.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045587	Lypd10	ENSMUST00000206826	ENSMUSP00000145674	TRANSLATION	protein_coding	stop	-	2	118	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000045587	Lypd10	ENSMUST00000051714	ENSMUSP00000053275	TRANSLATION	protein_coding	-	CCDS20960.1	1	246	0	0	0.5	41.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030695	Aldoa	ENSMUST00000032934	ENSMUSP00000032934	TRANSLATION	protein_coding	-	CCDS21845.1	1	364	21	8.83	17.5	627.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030695	Aldoa	ENSMUST00000133514	ENSMUSP00000114587	TRANSLATION	protein_coding	stop	-	3	193	7	3	0	201.6	0	-1,1	-	-	-1	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000205890	ENSMUSP00000146060	TRANSLATION	protein_coding	stop	-	5	190	11	4.58	0	317	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000151137	ENSMUSP00000118417	TRANSLATION	protein_coding	stop	-	2	236	12	5.83	0	414.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000147748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030695	Aldoa	ENSMUST00000087566	ENSMUSP00000084846	TRANSLATION	protein_coding	-	CCDS52399.1	5	418	21	8.83	6.3	627.3	0	-1,1	-	-	19.284	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000205336	ENSMUSP00000146116	TRANSLATION	protein_coding	stop	-	5	209	9	3.5	0	241.3	0	-1,1	-	-	-1	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000106348	ENSMUSP00000101955	TRANSLATION	protein_coding	-	CCDS21845.1	1	364	21	8.83	17.5	627.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030695	Aldoa	ENSMUST00000141355	ENSMUSP00000117349	TRANSLATION	protein_coding	stop	-	5	180	9	4.25	0	292.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030695	Aldoa	ENSMUST00000139657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030695	Aldoa	ENSMUST00000135707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030695	Aldoa	ENSMUST00000143509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042246	Tmc7	ENSMUST00000044195	ENSMUSP00000046927	TRANSLATION	protein_coding	-	CCDS21772.1	1	726	0	0	3.9	164.6	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000042246	Tmc7	ENSMUST00000139693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042246	Tmc7	ENSMUST00000153635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042246	Tmc7	ENSMUST00000145989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025790	Slco3a1	ENSMUST00000138099	ENSMUSP00000115279	TRANSLATION	protein_coding	stop	-	2	165	0	0	0	128.5	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000025790	Slco3a1	ENSMUST00000134539	ENSMUSP00000116946	TRANSLATION	protein_coding	start/stop	-	3	219	0	0	0	233.2	7	0,-3	-	-	-1	MINOR
ENSMUSG00000025790	Slco3a1	ENSMUST00000026897	ENSMUSP00000026897	TRANSLATION	protein_coding	-	CCDS21367.1	1	710	0	0	7.5	627.2	23	-4,-5	-	-	9	PRINCIPAL:4
ENSMUSG00000025790	Slco3a1	ENSMUST00000098371	ENSMUSP00000095973	TRANSLATION	protein_coding	-	CCDS21366.1	1	692	0	0	7.5	627.2	23	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000025790	Slco3a1	ENSMUST00000129292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025790	Slco3a1	ENSMUST00000142175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025790	Slco3a1	ENSMUST00000136389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025790	Slco3a1	ENSMUST00000107453	ENSMUSP00000103077	TRANSLATION	protein_coding	-	-	1	602	0	0	0	564.3	21	-4,-5	-	-	2.226	MINOR
ENSMUSG00000110253	Olfr495	ENSMUST00000215215	ENSMUSP00000150689	TRANSLATION	protein_coding	-	CCDS21714.1	5	330	0	0	0.5	169.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000110253	Olfr495	ENSMUST00000210990	ENSMUSP00000147501	TRANSLATION	protein_coding	-	CCDS21714.1	-	330	0	0	0.5	169.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000055571	Olfr305	ENSMUST00000213255	ENSMUSP00000149762	TRANSLATION	protein_coding	-	CCDS21427.1	5	319	0	0.2	0.5	137.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055571	Olfr305	ENSMUST00000069236	ENSMUSP00000068650	TRANSLATION	protein_coding	-	CCDS21427.1	-	319	0	0.2	0.5	137.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055571	Olfr305	ENSMUST00000216700	ENSMUSP00000149883	TRANSLATION	protein_coding	-	CCDS21427.1	5	319	0	0.2	0.5	137.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055571	Olfr305	ENSMUST00000213869	ENSMUSP00000149876	TRANSLATION	protein_coding	-	CCDS21427.1	5	319	0	0.2	0.5	137.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036521	Scgb2b2	ENSMUST00000205821	ENSMUSP00000146061	TRANSLATION	protein_coding	-	-	5	46	0	0.598	0	0	0	-4,-5	-	-	1.944	MINOR
ENSMUSG00000036521	Scgb2b2	ENSMUST00000038835	ENSMUSP00000048540	TRANSLATION	protein_coding	-	CCDS21128.1	1	114	0	1.848	0.5	105.6	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025723	Nmb	ENSMUST00000149792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025723	Nmb	ENSMUST00000146619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025723	Nmb	ENSMUST00000119428	ENSMUSP00000113407	TRANSLATION	protein_coding	-	CCDS80742.1	2	131	0	0	1.5	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000025723	Nmb	ENSMUST00000026817	ENSMUSP00000026817	TRANSLATION	protein_coding	-	CCDS21400.1	1	121	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000043432	Leng9	ENSMUST00000058358	ENSMUSP00000061079	TRANSLATION	protein_coding	-	CCDS20732.1	-	485	4	0	0.5	133.5	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000044139	Prss53	ENSMUST00000205300	ENSMUSP00000145763	TRANSLATION	protein_coding	-	-	1	482	14	4.02	0	233.4	0	0,-2	-	-	11.676	MINOR
ENSMUSG00000044139	Prss53	ENSMUST00000121394	ENSMUSP00000112972	TRANSLATION	protein_coding	-	CCDS52409.1	1	552	18	4.62	6.3	274.4	0	0,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000094735	Vmn1r95	ENSMUST00000168984	ENSMUSP00000129501	TRANSLATION	protein_coding	-	CCDS52069.1	-	307	0	0	1.5	55.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000109884	Olfr490	ENSMUST00000211345	ENSMUSP00000147922	TRANSLATION	protein_coding	-	CCDS21710.1	5	314	0	0.32	1.5	176.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109884	Olfr490	ENSMUST00000210114	ENSMUSP00000147513	TRANSLATION	protein_coding	-	CCDS21710.1	-	314	0	0.32	1.5	176.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003863	Ppfia3	ENSMUST00000209424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003863	Ppfia3	ENSMUST00000211098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003863	Ppfia3	ENSMUST00000210479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003863	Ppfia3	ENSMUST00000003961	ENSMUSP00000003961	TRANSLATION	protein_coding	-	CCDS52246.1	1	1194	0	7.081	6.3	100.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000003863	Ppfia3	ENSMUST00000210248	ENSMUSP00000147584	TRANSLATION	protein_coding	start	-	5	1034	0	6.85	0	100.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003863	Ppfia3	ENSMUST00000210586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003863	Ppfia3	ENSMUST00000210844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003863	Ppfia3	ENSMUST00000211067	ENSMUSP00000148200	TRANSLATION	protein_coding	-	CCDS52246.1	5	1194	0	7.081	6.3	100.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000056972	Magel2	ENSMUST00000080403	ENSMUSP00000079265	TRANSLATION	protein_coding	-	CCDS52264.1	-	1284	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000006204	Cdcp3	ENSMUST00000128522	ENSMUSP00000147027	TRANSLATION	protein_coding	start	-	5	286	0	3.064	0	159.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006204	Cdcp3	ENSMUST00000208921	ENSMUSP00000150784	TRANSLATION	protein_coding	-	-	5	2696	13	13.2062	0	1730.6	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000006204	Cdcp3	ENSMUST00000050586	ENSMUSP00000061529	TRANSLATION	protein_coding	-	CCDS21911.1	1	841	3	6.7816	0.5	498.2	0	2,-1	-	-	0	MINOR
ENSMUSG00000058239	Usf2	ENSMUST00000169496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058239	Usf2	ENSMUST00000172417	ENSMUSP00000132833	TRANSLATION	protein_coding	-	-	5	215	0	2.88	1.2	65.1	0	-4,-5	-	-	12.076	MINOR
ENSMUSG00000058239	Usf2	ENSMUST00000058860	ENSMUSP00000132256	TRANSLATION	protein_coding	-	CCDS21118.1	1	346	0	2.88	6.3	65.1	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000058239	Usf2	ENSMUST00000170699	ENSMUSP00000127908	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058239	Usf2	ENSMUST00000171338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058239	Usf2	ENSMUST00000108119	ENSMUSP00000132021	TRANSLATION	protein_coding	-	-	5	279	0	2.88	4.1	65.1	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000058239	Usf2	ENSMUST00000167285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058239	Usf2	ENSMUST00000166340	ENSMUSP00000132232	TRANSLATION	nonsense_mediated_decay	start	-	1	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058239	Usf2	ENSMUST00000162228	ENSMUSP00000125520	TRANSLATION	protein_coding	-	-	5	319	0	2.88	4.4	65.1	0	-4,-5	-	-	13.284	ALTERNATIVE:2
ENSMUSG00000058239	Usf2	ENSMUST00000168731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058239	Usf2	ENSMUST00000170442	ENSMUSP00000130298	TRANSLATION	protein_coding	start	-	5	293	0	2.55	0	40.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000091955	Gm9844	ENSMUST00000170837	ENSMUSP00000137210	TRANSLATION	protein_coding	-	-	-	44	0	1	19.5	82.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030532	Hddc3	ENSMUST00000205448	ENSMUSP00000145745	TRANSLATION	protein_coding	start	-	3	74	1	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000206122	ENSMUSP00000145537	TRANSLATION	protein_coding	-	-	3	146	4	3.056	0.5	26	0	-4,-5	-	-	14.134	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000205768	ENSMUSP00000145903	TRANSLATION	nonsense_mediated_decay	start	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000032747	ENSMUSP00000032747	TRANSLATION	protein_coding	-	CCDS21396.1	1	179	4	3.99	15.5	26	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030532	Hddc3	ENSMUST00000205531	ENSMUSP00000145594	TRANSLATION	nonsense_mediated_decay	start	-	3	89	1	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000206480	ENSMUSP00000145686	TRANSLATION	protein_coding	-	-	2	143	4	3.254	1.2	26	0	-4,-5	-	-	14.586	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000206559	ENSMUSP00000146222	TRANSLATION	nonsense_mediated_decay	start	-	3	27	0	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000205744	ENSMUSP00000145645	TRANSLATION	nonsense_mediated_decay	-	-	5	91	1	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000206089	ENSMUSP00000145996	TRANSLATION	protein_coding	start	-	3	69	1	1.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030532	Hddc3	ENSMUST00000206074	ENSMUSP00000146252	TRANSLATION	protein_coding	-	-	2	153	4	2.99	0.5	26	0	-4,-5	-	-	14.002	MINOR
ENSMUSG00000015134	Aldh1a3	ENSMUST00000015278	ENSMUSP00000015278	TRANSLATION	protein_coding	-	CCDS21345.1	1	512	26	12.75	14.8	621.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000015134	Aldh1a3	ENSMUST00000174215	ENSMUSP00000146703	TRANSLATION	protein_coding	-	-	1	176	19	3.75	0	198.1	0	-4,-7	-	-	1.332	MINOR
ENSMUSG00000015134	Aldh1a3	ENSMUST00000174701	ENSMUSP00000133370	TRANSLATION	protein_coding	start/stop	-	5	277	14	6.5	0	180.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015134	Aldh1a3	ENSMUST00000174209	ENSMUSP00000146806	TRANSLATION	protein_coding	-	-	1	176	19	3.75	0	198.1	0	-4,-7	-	-	1.332	MINOR
ENSMUSG00000015134	Aldh1a3	ENSMUST00000173756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045236	Krtap5-4	ENSMUST00000061403	ENSMUSP00000059461	TRANSLATION	protein_coding	-	CCDS22027.1	-	223	0	0	0.5	48.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063047	Zfp780b	ENSMUST00000205431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063047	Zfp780b	ENSMUST00000205874	ENSMUSP00000145799	TRANSLATION	protein_coding	-	-	1	106	0	1	0	82.8	0	-4,-5	-	-	4.998	MINOR
ENSMUSG00000063047	Zfp780b	ENSMUST00000081618	ENSMUSP00000080324	TRANSLATION	protein_coding	-	CCDS39853.1	5	806	87	1.2	0.5	465.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063047	Zfp780b	ENSMUST00000206685	ENSMUSP00000146224	TRANSLATION	protein_coding	-	CCDS39853.1	1	806	87	1.2	0.5	465.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063047	Zfp780b	ENSMUST00000207098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025505	Tmem80	ENSMUST00000132061	ENSMUSP00000118223	TRANSLATION	protein_coding	-	CCDS22008.1	3	123	0	0	0.5	97.1	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025505	Tmem80	ENSMUST00000145184	ENSMUSP00000117633	TRANSLATION	protein_coding	-	-	5	92	0	0	0	42.9	5	-2,-5	-	-	2.652	MINOR
ENSMUSG00000025505	Tmem80	ENSMUST00000126510	ENSMUSP00000123330	TRANSLATION	protein_coding	-	CCDS22008.1	5	123	0	0	0.5	97.1	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025505	Tmem80	ENSMUST00000026578	ENSMUSP00000026578	TRANSLATION	protein_coding	-	CCDS22008.1	1	123	0	0	0.5	97.1	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025505	Tmem80	ENSMUST00000155657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025505	Tmem80	ENSMUST00000134221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025505	Tmem80	ENSMUST00000128906	ENSMUSP00000117306	TRANSLATION	protein_coding	-	-	2	92	0	0	0	42.9	5	-2,-5	-	-	2.652	MINOR
ENSMUSG00000025505	Tmem80	ENSMUST00000133012	ENSMUSP00000116695	TRANSLATION	protein_coding	-	CCDS22008.1	1	123	0	0	0.5	97.1	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025505	Tmem80	ENSMUST00000128649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020420	Zfp607a	ENSMUST00000053722	ENSMUSP00000051496	TRANSLATION	protein_coding	-	CCDS39852.1	5	686	72	1.2	0.5	355.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020420	Zfp607a	ENSMUST00000205534	ENSMUSP00000146261	TRANSLATION	protein_coding	-	CCDS39852.1	1	686	72	1.2	0.5	355.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020420	Zfp607a	ENSMUST00000205715	ENSMUSP00000146006	TRANSLATION	protein_coding	-	CCDS39852.1	5	686	72	1.2	0.5	355.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070469	Adamtsl3	ENSMUST00000172784	ENSMUSP00000134150	TRANSLATION	protein_coding	start	-	2	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070469	Adamtsl3	ENSMUST00000172490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070469	Adamtsl3	ENSMUST00000173287	ENSMUSP00000133637	TRANSLATION	protein_coding	-	CCDS57559.1	5	1706	6	5.95	1.5	316.4	0	-2,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070469	Adamtsl3	ENSMUST00000173828	ENSMUSP00000133337	TRANSLATION	protein_coding	-	-	5	763	0	2.2	0	98.3	0	0,-4	-	-	0	MINOR
ENSMUSG00000070469	Adamtsl3	ENSMUST00000174495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059479	B3gnt8	ENSMUST00000076034	ENSMUSP00000092277	TRANSLATION	protein_coding	-	CCDS20989.1	1	389	0	0	1.5	104.6	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000059479	B3gnt8	ENSMUST00000205281	ENSMUSP00000146127	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000059479	B3gnt8	ENSMUST00000206824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059479	B3gnt8	ENSMUST00000206940	ENSMUSP00000145797	TRANSLATION	nonsense_mediated_decay	-	-	1	389	0	0	1.5	104.6	0	0,-4	-	-	-1	MINOR
ENSMUSG00000074115	Saa1	ENSMUST00000210547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074115	Saa1	ENSMUST00000128088	ENSMUSP00000119150	TRANSLATION	protein_coding	-	CCDS21284.1	1	122	0	2.6	2.9	165.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000109324	Prmt1	ENSMUST00000208829	ENSMUSP00000147098	TRANSLATION	protein_coding	-	-	5	122	2	3.25	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000208897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109324	Prmt1	ENSMUST00000207735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109324	Prmt1	ENSMUST00000207659	ENSMUSP00000147101	TRANSLATION	protein_coding	-	CCDS85293.1	5	254	23	7.08	0.5	28.6	0	-4,-5	-	-	7.416	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000107843	ENSMUSP00000103474	TRANSLATION	protein_coding	-	CCDS21222.1	1	371	28	10.41	9.7	36.1	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000109324	Prmt1	ENSMUST00000209124	ENSMUSP00000146395	TRANSLATION	protein_coding	-	-	5	208	6	6.08	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000207522	ENSMUSP00000147201	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000045325	ENSMUSP00000045365	TRANSLATION	protein_coding	-	-	5	318	26	9.16	0	36.1	0	-4,-5	-	-	14.166	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000207702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109324	Prmt1	ENSMUST00000209056	ENSMUSP00000146655	TRANSLATION	protein_coding	start/stop	-	5	164	21	5.08	0	32.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000208938	ENSMUSP00000146804	TRANSLATION	protein_coding	start	-	3	113	16	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000207370	ENSMUSP00000147252	TRANSLATION	protein_coding	-	CCDS57547.1	1	353	28	10.41	9.7	36.1	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000109324	Prmt1	ENSMUST00000208312	ENSMUSP00000146526	TRANSLATION	protein_coding	stop	-	5	217	28	5.69	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109324	Prmt1	ENSMUST00000208778	ENSMUSP00000147193	TRANSLATION	protein_coding	start/stop	-	5	193	12	5.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043855	Olfr479	ENSMUST00000214599	ENSMUSP00000149060	TRANSLATION	protein_coding	-	CCDS21701.1	5	327	0	0.28	1.5	151.9	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043855	Olfr479	ENSMUST00000063151	ENSMUSP00000056631	TRANSLATION	protein_coding	-	CCDS21701.1	-	327	0	0.28	1.5	151.9	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043855	Olfr479	ENSMUST00000209805	ENSMUSP00000147905	TRANSLATION	protein_coding	-	CCDS21701.1	5	327	0	0.28	1.5	151.9	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025480	Syce1	ENSMUST00000211616	ENSMUSP00000148137	TRANSLATION	protein_coding	stop	-	5	86	0	0	0	90.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025480	Syce1	ENSMUST00000026553	ENSMUSP00000026553	TRANSLATION	protein_coding	-	CCDS52436.1	1	329	0	0	1.5	210.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068962	Zfp114	ENSMUST00000086010	ENSMUSP00000083173	TRANSLATION	protein_coding	-	-	1	586	43	1.8	0.5	274	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000068962	Zfp114	ENSMUST00000206547	ENSMUSP00000146241	TRANSLATION	protein_coding	-	CCDS39826.1	1	585	43	1.8	0.5	274	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000068962	Zfp114	ENSMUST00000205309	ENSMUSP00000145971	TRANSLATION	protein_coding	stop	-	1	301	3	1	0	71.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058420	Syt17	ENSMUST00000203796	ENSMUSP00000145087	TRANSLATION	protein_coding	-	-	1	413	7	3.6	5.9	139.3	0	-4,-5	-	-	19.85	ALTERNATIVE:1
ENSMUSG00000058420	Syt17	ENSMUST00000203485	ENSMUSP00000144987	TRANSLATION	protein_coding	-	-	1	419	7	3	0	118.7	0	-4,-5	-	-	15.564	MINOR
ENSMUSG00000058420	Syt17	ENSMUST00000207650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058420	Syt17	ENSMUST00000081574	ENSMUSP00000080284	TRANSLATION	protein_coding	-	CCDS40103.1	1	470	7	3.6	6.3	139	0	-4,-5	-	-	19.982	PRINCIPAL:2
ENSMUSG00000058420	Syt17	ENSMUST00000207034	ENSMUSP00000146460	TRANSLATION	protein_coding	stop	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058420	Syt17	ENSMUST00000203465	ENSMUSP00000147122	TRANSLATION	protein_coding	start	-	1	469	7	3.6	0	139	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000092473	Vmn1r180	ENSMUST00000173816	ENSMUSP00000134362	TRANSLATION	protein_coding	-	CCDS20937.1	-	305	0	0	1.5	58.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074377	Sult2a4	ENSMUST00000108520	ENSMUSP00000104160	TRANSLATION	protein_coding	-	-	5	285	20	6	0.5	270.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074377	Sult2a4	ENSMUST00000165167	ENSMUSP00000130490	TRANSLATION	protein_coding	-	CCDS52032.1	5	284	20	6	0.5	270.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000066537	Vmn2r57	ENSMUST00000233793	ENSMUSP00000156532	TRANSLATION	protein_coding	-	-	-	561	1	3.605	0	200.6	0	2,-3	-	-	6.819	MINOR
ENSMUSG00000066537	Vmn2r57	ENSMUST00000233555	ENSMUSP00000156960	TRANSLATION	protein_coding	-	-	-	842	3	3.38	0	370.6	8	2,-3	-	-	12.108	MINOR
ENSMUSG00000066537	Vmn2r57	ENSMUST00000165029	ENSMUSP00000125817	TRANSLATION	protein_coding	-	CCDS52210.1	5	863	3	3.695	0.5	408.3	8	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000080751	Olfr634-ps1	ENSMUST00000119267	ENSMUSP00000147597	TRANSLATION	polymorphic_pseudogene	stop	-	-	318	0	0.16	0	443.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000108815	Gm49388	ENSMUST00000136823	ENSMUSP00000145901	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	29	5	0.525	2	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000108815	Gm49388	ENSMUST00000154987	ENSMUSP00000145647	TRANSLATION	nonsense_mediated_decay,RT	start	-	1	1173	18	3.275	0	122	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000043310	Olfr571	ENSMUST00000215773	ENSMUSP00000148964	TRANSLATION	protein_coding	-	CCDS21552.1	5	322	0	0.36	0.5	300.7	4	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000043310	Olfr571	ENSMUST00000214160	ENSMUSP00000150836	TRANSLATION	protein_coding	-	CCDS21552.1	5	322	0	0.36	0.5	300.7	4	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000043310	Olfr571	ENSMUST00000061738	ENSMUSP00000062385	TRANSLATION	protein_coding	-	CCDS21552.1	-	322	0	0.36	0.5	300.7	4	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000063550	Nup98	ENSMUST00000211375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063550	Nup98	ENSMUST00000211005	ENSMUSP00000147445	TRANSLATION	protein_coding	-	CCDS85357.1	1	984	0	7.35	0.5	40.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000063550	Nup98	ENSMUST00000211022	ENSMUSP00000147454	TRANSLATION	protein_coding	-	CCDS85359.1	2	967	0	7.35	0.5	38.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000063550	Nup98	ENSMUST00000211235	ENSMUSP00000147486	TRANSLATION	protein_coding	-	CCDS85360.1	5	1170	0	10.35	0.5	40.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000063550	Nup98	ENSMUST00000210682	ENSMUSP00000148115	TRANSLATION	protein_coding	-	CCDS85358.1	5	1816	0	20.35	3.9	371.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000063550	Nup98	ENSMUST00000211764	ENSMUSP00000147807	TRANSLATION	protein_coding	start/stop	-	3	230	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063550	Nup98	ENSMUST00000070165	ENSMUSP00000068530	TRANSLATION	protein_coding	-	CCDS21528.1	1	1187	0	10.35	0.5	40.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000063550	Nup98	ENSMUST00000209242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030474	Siglece	ENSMUST00000032667	ENSMUSP00000032667	TRANSLATION	protein_coding	-	CCDS21178.1	1	467	0	4.38	0.5	79.4	2	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030474	Siglece	ENSMUST00000206421	ENSMUSP00000146072	TRANSLATION	protein_coding	start	-	3	221	0	2.38	0	34.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000041343	Ankrd42	ENSMUST00000056106	ENSMUSP00000061208	TRANSLATION	protein_coding	-	-	1	527	0	6.55	0	175.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000041343	Ankrd42	ENSMUST00000126305	ENSMUSP00000123315	TRANSLATION	nonsense_mediated_decay	-	-	1	163	0	3.25	0	56.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041343	Ankrd42	ENSMUST00000138267	ENSMUSP00000146446	TRANSLATION	protein_coding	-	-	1	356	0	6.45	0	135.4	0	-4,-7	-	-	9.39	MINOR
ENSMUSG00000041343	Ankrd42	ENSMUST00000142971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041343	Ankrd42	ENSMUST00000138215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041343	Ankrd42	ENSMUST00000207971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041343	Ankrd42	ENSMUST00000207131	ENSMUSP00000147057	TRANSLATION	protein_coding	-	-	1	343	0	6.15	0	135.4	0	-4,-7	-	-	8.79	MINOR
ENSMUSG00000041343	Ankrd42	ENSMUST00000118157	ENSMUSP00000113767	TRANSLATION	protein_coding	-	CCDS52310.1	1	516	0	6.55	0.5	175.6	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000041343	Ankrd42	ENSMUST00000207151	ENSMUSP00000146370	TRANSLATION	nonsense_mediated_decay	-	-	1	152	0	2.95	0	55.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052214	Opa3	ENSMUST00000063976	ENSMUSP00000069965	TRANSLATION	protein_coding	-	CCDS20894.1	1	179	0	0	1.5	156.2	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000052214	Opa3	ENSMUST00000206335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052214	Opa3	ENSMUST00000161711	ENSMUSP00000145909	TRANSLATION	protein_coding	-	-	2	208	0	0	0	141.4	0	-4,-2	-	-	5.112	ALTERNATIVE:2
ENSMUSG00000002043	Trappc6a	ENSMUST00000002112	ENSMUSP00000002112	TRANSLATION	protein_coding	-	CCDS20905.1	1	159	0	4.91	6.3	112.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000002043	Trappc6a	ENSMUST00000207730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002043	Trappc6a	ENSMUST00000147114	ENSMUSP00000116737	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002043	Trappc6a	ENSMUST00000129808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002043	Trappc6a	ENSMUST00000136873	ENSMUSP00000119036	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002043	Trappc6a	ENSMUST00000135972	ENSMUSP00000120406	TRANSLATION	protein_coding	start	-	5	81	0	2.66	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002043	Trappc6a	ENSMUST00000108455	ENSMUSP00000104095	TRANSLATION	protein_coding	-	-	1	183	0	4.58	0	108.8	0	-4,-7	-	-	11.118	MINOR
ENSMUSG00000040428	Plekha4	ENSMUST00000210480	ENSMUSP00000147680	TRANSLATION	protein_coding	stop	-	3	56	0	0.684	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000040428	Plekha4	ENSMUST00000051810	ENSMUSP00000051468	TRANSLATION	protein_coding	-	CCDS52248.1	5	779	8	4.264	1.5	59.6	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000040428	Plekha4	ENSMUST00000209517	ENSMUSP00000148229	TRANSLATION	protein_coding	-	CCDS52248.1	5	779	8	4.264	1.5	59.6	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000040428	Plekha4	ENSMUST00000210797	ENSMUSP00000148244	TRANSLATION	protein_coding	start	-	1	82	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040428	Plekha4	ENSMUST00000211155	ENSMUSP00000147878	TRANSLATION	protein_coding	-	-	5	612	8	4.264	0	59.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000040428	Plekha4	ENSMUST00000211227	ENSMUSP00000148001	TRANSLATION	protein_coding	-	-	1	588	8	4.264	0	59.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000040428	Plekha4	ENSMUST00000211794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040428	Plekha4	ENSMUST00000211797	ENSMUSP00000147344	TRANSLATION	nonsense_mediated_decay	-	-	2	480	1	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040428	Plekha4	ENSMUST00000211348	ENSMUSP00000147799	TRANSLATION	protein_coding	start	-	3	94	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040428	Plekha4	ENSMUST00000211106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035458	Tnni3	ENSMUST00000209148	ENSMUSP00000146966	TRANSLATION	protein_coding	stop	-	5	152	0	2.03	0	43	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035458	Tnni3	ENSMUST00000154913	ENSMUSP00000122916	TRANSLATION	protein_coding	stop	-	3	112	0	2.91	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035458	Tnni3	ENSMUST00000140424	ENSMUSP00000115015	TRANSLATION	protein_coding	stop	-	5	125	0	3.41	0	76.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035458	Tnni3	ENSMUST00000126873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035458	Tnni3	ENSMUST00000150166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035458	Tnni3	ENSMUST00000098859	ENSMUSP00000096458	TRANSLATION	protein_coding	-	CCDS39736.1	1	211	0	5.16	7.5	153.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035458	Tnni3	ENSMUST00000132621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035458	Tnni3	ENSMUST00000127736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030522	Mtmr10	ENSMUST00000206680	ENSMUSP00000145602	TRANSLATION	nonsense_mediated_decay	start	-	3	73	0	0.14	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030522	Mtmr10	ENSMUST00000206452	ENSMUSP00000146259	TRANSLATION	nonsense_mediated_decay	-	-	5	190	0	1.775	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030522	Mtmr10	ENSMUST00000032736	ENSMUSP00000032736	TRANSLATION	protein_coding	-	CCDS39976.1	1	771	0	5.885	1.5	424.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030522	Mtmr10	ENSMUST00000206732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094010	Vmn1r119	ENSMUST00000164683	ENSMUSP00000127126	TRANSLATION	protein_coding	-	CCDS52087.1	-	307	0	0	1.5	60.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000099729	Scgb2b11	ENSMUST00000188293	ENSMUSP00000140470	TRANSLATION	protein_coding	-	CCDS80697.1	5	112	0	1.25	0.5	96.4	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030815	Phkg2	ENSMUST00000149853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030815	Phkg2	ENSMUST00000205633	ENSMUSP00000145927	TRANSLATION	nonsense_mediated_decay	-	-	3	76	8	2.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030815	Phkg2	ENSMUST00000129457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030815	Phkg2	ENSMUST00000033086	ENSMUSP00000033086	TRANSLATION	protein_coding	-	CCDS21869.1	1	406	19	8.69	7.5	267.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030815	Phkg2	ENSMUST00000121004	ENSMUSP00000113533	TRANSLATION	protein_coding	-	CCDS21869.1	5	406	19	8.69	7.5	267.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030815	Phkg2	ENSMUST00000146383	ENSMUSP00000115593	TRANSLATION	nonsense_mediated_decay	-	-	3	90	8	2.632	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030815	Phkg2	ENSMUST00000206818	ENSMUSP00000145834	TRANSLATION	nonsense_mediated_decay	start	-	5	104	10	2.66	0	104.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030815	Phkg2	ENSMUST00000154891	ENSMUSP00000116860	TRANSLATION	nonsense_mediated_decay	-	-	5	87	8	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030815	Phkg2	ENSMUST00000151908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030815	Phkg2	ENSMUST00000138158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030815	Phkg2	ENSMUST00000133621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030868	Dctn5	ENSMUST00000176193	ENSMUSP00000134876	TRANSLATION	nonsense_mediated_decay	-	-	2	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030868	Dctn5	ENSMUST00000123602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030868	Dctn5	ENSMUST00000176295	ENSMUSP00000135530	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030868	Dctn5	ENSMUST00000033156	ENSMUSP00000033156	TRANSLATION	protein_coding	-	CCDS21811.1	1	182	0	4.83	16.2	24.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000046364	Rpl27a	ENSMUST00000053298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046364	Rpl27a	ENSMUST00000156921	ENSMUSP00000134650	TRANSLATION	nonsense_mediated_decay	-	-	2	41	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000046364	Rpl27a	ENSMUST00000174303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046364	Rpl27a	ENSMUST00000132877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046364	Rpl27a	ENSMUST00000149143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046364	Rpl27a	ENSMUST00000143107	ENSMUSP00000123410	TRANSLATION	protein_coding	-	CCDS40083.1	1	148	0	0	19	88.2	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000040189	Ccdc114	ENSMUST00000210039	ENSMUSP00000147338	TRANSLATION	protein_coding	-	-	5	697	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000040189	Ccdc114	ENSMUST00000211367	ENSMUSP00000148002	TRANSLATION	protein_coding	-	-	1	134	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000040189	Ccdc114	ENSMUST00000038720	ENSMUSP00000042772	TRANSLATION	protein_coding	-	CCDS21271.1	1	658	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000040189	Ccdc114	ENSMUST00000211628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040189	Ccdc114	ENSMUST00000210867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040189	Ccdc114	ENSMUST00000236631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040189	Ccdc114	ENSMUST00000210602	ENSMUSP00000147658	TRANSLATION	protein_coding	-	-	1	136	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000095629	Vmn1r89	ENSMUST00000226717	ENSMUSP00000154060	TRANSLATION	protein_coding	-	CCDS20830.1	-	316	0	0	1.5	113.7	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095629	Vmn1r89	ENSMUST00000227390	ENSMUSP00000154139	TRANSLATION	protein_coding	-	-	-	248	0	0	0	100.8	6	-4,-7	-	-	5.226	MINOR
ENSMUSG00000095629	Vmn1r89	ENSMUST00000227319	ENSMUSP00000154046	TRANSLATION	protein_coding	-	-	-	127	0	0	0	53	2	-4,-7	-	-	2.358	MINOR
ENSMUSG00000095629	Vmn1r89	ENSMUST00000227276	ENSMUSP00000154599	TRANSLATION	protein_coding	-	-	-	271	0	0	0	100.5	6	-4,-5	-	-	5.208	MINOR
ENSMUSG00000095629	Vmn1r89	ENSMUST00000228795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095629	Vmn1r89	ENSMUST00000227239	ENSMUSP00000154425	TRANSLATION	protein_coding	-	CCDS20830.1	-	316	0	0	1.5	113.7	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095629	Vmn1r89	ENSMUST00000053008	ENSMUSP00000096413	TRANSLATION	protein_coding	-	CCDS20830.1	-	316	0	0	1.5	113.7	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095629	Vmn1r89	ENSMUST00000228825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095629	Vmn1r89	ENSMUST00000227176	ENSMUSP00000154366	TRANSLATION	protein_coding	-	CCDS20830.1	-	316	0	0	1.5	113.7	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095629	Vmn1r89	ENSMUST00000228587	ENSMUSP00000154359	TRANSLATION	protein_coding	-	CCDS20830.1	-	316	0	0	1.5	113.7	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057101	Zfp180	ENSMUST00000206184	ENSMUSP00000145547	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057101	Zfp180	ENSMUST00000207002	ENSMUSP00000146219	TRANSLATION	protein_coding	-	-	1	42	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057101	Zfp180	ENSMUST00000206482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057101	Zfp180	ENSMUST00000203854	ENSMUSP00000145165	TRANSLATION	protein_coding	-	-	1	99	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057101	Zfp180	ENSMUST00000068975	ENSMUSP00000064611	TRANSLATION	protein_coding	-	CCDS39823.1	1	655	48	0.6	0.5	296.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038886	Man2a2	ENSMUST00000206066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038886	Man2a2	ENSMUST00000205853	ENSMUSP00000145916	TRANSLATION	nonsense_mediated_decay	start	-	3	69	1	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038886	Man2a2	ENSMUST00000206301	ENSMUSP00000145861	TRANSLATION	nonsense_mediated_decay	-	-	1	583	5	6.83	0	385.1	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000038886	Man2a2	ENSMUST00000206973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038886	Man2a2	ENSMUST00000205535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038886	Man2a2	ENSMUST00000205436	ENSMUSP00000145688	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038886	Man2a2	ENSMUST00000206807	ENSMUSP00000146210	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038886	Man2a2	ENSMUST00000206212	ENSMUSP00000145820	TRANSLATION	protein_coding	stop	-	5	29	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000038886	Man2a2	ENSMUST00000206917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038886	Man2a2	ENSMUST00000205318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038886	Man2a2	ENSMUST00000098346	ENSMUSP00000095949	TRANSLATION	protein_coding	-	CCDS57556.1	1	1152	5	13.804	0.5	724.3	1	-3,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000039194	Rlbp1	ENSMUST00000179243	ENSMUSP00000137143	TRANSLATION	protein_coding	-	CCDS39990.1	1	317	19	6.5	11.5	153.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039194	Rlbp1	ENSMUST00000206162	ENSMUSP00000146196	TRANSLATION	protein_coding	stop	-	3	262	18	5.5	0	127.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039194	Rlbp1	ENSMUST00000205638	ENSMUSP00000146144	TRANSLATION	protein_coding	stop	-	3	61	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039194	Rlbp1	ENSMUST00000206320	ENSMUSP00000145611	TRANSLATION	protein_coding	stop	-	5	175	2	3.5	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039194	Rlbp1	ENSMUST00000053718	ENSMUSP00000054545	TRANSLATION	protein_coding	-	CCDS39990.1	1	317	19	6.5	11.5	153.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039194	Rlbp1	ENSMUST00000206624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039194	Rlbp1	ENSMUST00000206695	ENSMUSP00000146075	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039194	Rlbp1	ENSMUST00000205442	ENSMUSP00000145850	TRANSLATION	protein_coding	stop	-	5	120	0	2.5	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070822	Zscan18	ENSMUST00000210891	ENSMUSP00000147686	TRANSLATION	nonsense_mediated_decay	start	-	3	87	0	1	0	100.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070822	Zscan18	ENSMUST00000211392	ENSMUSP00000148239	TRANSLATION	protein_coding	-	CCDS52021.1	5	809	4	1	0.5	116.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000070822	Zscan18	ENSMUST00000211665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070822	Zscan18	ENSMUST00000210650	ENSMUSP00000147550	TRANSLATION	protein_coding	-	CCDS52021.1	5	809	4	1	0.5	116.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000070822	Zscan18	ENSMUST00000046245	ENSMUSP00000047088	TRANSLATION	protein_coding	-	CCDS52021.1	5	809	4	1	0.5	116.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000070822	Zscan18	ENSMUST00000209869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090383	Vmn2r58	ENSMUST00000171671	ENSMUSP00000126966	TRANSLATION	protein_coding	-	CCDS52212.1	5	862	0	3.72	0.5	396.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000090383	Vmn2r58	ENSMUST00000233081	ENSMUSP00000156803	TRANSLATION	protein_coding	-	-	-	517	0	2.12	0	132.4	0	2,-3	-	-	2.802	MINOR
ENSMUSG00000090383	Vmn2r58	ENSMUST00000233389	ENSMUSP00000156834	TRANSLATION	nonsense_mediated_decay	-	-	-	91	0	0.4	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000090383	Vmn2r58	ENSMUST00000233147	ENSMUSP00000156405	TRANSLATION	nonsense_mediated_decay	-	-	-	72	0	0.4	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000090383	Vmn2r58	ENSMUST00000233957	ENSMUSP00000156760	TRANSLATION	nonsense_mediated_decay	-	-	-	72	0	0.4	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000090383	Vmn2r58	ENSMUST00000232976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090383	Vmn2r58	ENSMUST00000233177	ENSMUSP00000156783	TRANSLATION	nonsense_mediated_decay	-	-	-	524	0	2.12	0	132.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025486	Sirt3	ENSMUST00000026559	ENSMUSP00000026559	TRANSLATION	protein_coding	-	CCDS21989.1	1	257	32	5.41	7.1	182.6	0	-4,-6	-	-	20.04	PRINCIPAL:1
ENSMUSG00000025486	Sirt3	ENSMUST00000210398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025486	Sirt3	ENSMUST00000210974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025486	Sirt3	ENSMUST00000210706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025486	Sirt3	ENSMUST00000106048	ENSMUSP00000101663	TRANSLATION	protein_coding	-	CCDS21989.1	1	257	32	5.41	7.1	182.6	0	-4,-6	-	-	20.04	PRINCIPAL:1
ENSMUSG00000025486	Sirt3	ENSMUST00000210296	ENSMUSP00000147504	TRANSLATION	nonsense_mediated_decay	-	-	5	189	26	3.58	0	179.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025486	Sirt3	ENSMUST00000147331	ENSMUSP00000121151	TRANSLATION	protein_coding	stop	-	3	258	25	4.58	0	179.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000025486	Sirt3	ENSMUST00000137710	ENSMUSP00000115202	TRANSLATION	protein_coding	stop	-	5	100	15	1.83	0	91.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025486	Sirt3	ENSMUST00000137024	ENSMUSP00000114247	TRANSLATION	protein_coding	stop	-	3	182	26	3.58	0	118.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025486	Sirt3	ENSMUST00000211179	ENSMUSP00000147716	TRANSLATION	protein_coding	-	-	5	309	32	5.89	0	179.7	0	-4,-6	-	-	17.826	MINOR
ENSMUSG00000008461	Fut1	ENSMUST00000209379	ENSMUSP00000147274	TRANSLATION	protein_coding	-	CCDS85303.1	1	322	0	0	0.5	406.9	0	-4,-5	-	-	5.76	MINOR
ENSMUSG00000008461	Fut1	ENSMUST00000008605	ENSMUSP00000008605	TRANSLATION	protein_coding	-	CCDS21254.1	1	377	0	0	1.5	410.9	0	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000008461	Fut1	ENSMUST00000210150	ENSMUSP00000147602	TRANSLATION	protein_coding	stop	-	5	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049516	Spty2d1	ENSMUST00000208588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049516	Spty2d1	ENSMUST00000061639	ENSMUSP00000059457	TRANSLATION	protein_coding	-	CCDS21293.1	1	682	0	2.35	0.5	80.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055407	Map6	ENSMUST00000127492	ENSMUSP00000146340	TRANSLATION	protein_coding	-	CCDS85345.1	1	568	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000055407	Map6	ENSMUST00000068973	ENSMUSP00000064787	TRANSLATION	protein_coding	-	CCDS21479.1	1	906	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000055407	Map6	ENSMUST00000207883	ENSMUSP00000146585	TRANSLATION	protein_coding	-	CCDS21479.1	1	906	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000055407	Map6	ENSMUST00000208924	ENSMUSP00000146954	TRANSLATION	protein_coding	-	-	1	703	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000055407	Map6	ENSMUST00000209094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055407	Map6	ENSMUST00000208605	ENSMUSP00000146897	TRANSLATION	protein_coding	-	CCDS40029.1	1	306	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000055407	Map6	ENSMUST00000208978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055407	Map6	ENSMUST00000107100	ENSMUSP00000102717	TRANSLATION	protein_coding	-	CCDS40029.1	1	306	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000055407	Map6	ENSMUST00000122101	ENSMUSP00000113183	TRANSLATION	protein_coding	-	-	1	509	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000030471	Zdhhc13	ENSMUST00000125280	ENSMUSP00000123603	TRANSLATION	protein_coding	stop	-	1	442	3	3.35	0	161	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030471	Zdhhc13	ENSMUST00000118927	ENSMUSP00000112498	TRANSLATION	protein_coding	-	CCDS52259.1	1	622	3	5.7	7.5	211.7	5	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030471	Zdhhc13	ENSMUST00000139125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030534	Vps33b	ENSMUST00000145594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030534	Vps33b	ENSMUST00000150585	ENSMUSP00000138224	TRANSLATION	nonsense_mediated_decay	-	-	5	143	0	3	0	33	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030534	Vps33b	ENSMUST00000135470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030534	Vps33b	ENSMUST00000128254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030534	Vps33b	ENSMUST00000135053	ENSMUSP00000138472	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030534	Vps33b	ENSMUST00000205864	ENSMUSP00000146021	TRANSLATION	protein_coding	start	-	3	104	0	1.9	0	51	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030534	Vps33b	ENSMUST00000032749	ENSMUSP00000032749	TRANSLATION	protein_coding	-	CCDS39997.1	1	617	0	12.146	8.8	332.1	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051504	Siglech	ENSMUST00000165045	ENSMUSP00000130632	TRANSLATION	protein_coding	-	-	1	332	0	4.3	0	35.2	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000051504	Siglech	ENSMUST00000154933	ENSMUSP00000122697	TRANSLATION	nonsense_mediated_decay	-	-	1	47	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000051504	Siglech	ENSMUST00000171077	ENSMUSP00000130943	TRANSLATION	protein_coding	-	CCDS21313.2	5	309	0	4.3	0.5	35.2	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000051504	Siglech	ENSMUST00000060416	ENSMUSP00000058875	TRANSLATION	protein_coding	-	CCDS21313.2	1	309	0	4.3	0.5	35.2	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000051504	Siglech	ENSMUST00000094360	ENSMUSP00000091920	TRANSLATION	protein_coding	-	CCDS80731.1	1	293	0	4.1	0.5	35.2	1	3,-2	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000051504	Siglech	ENSMUST00000173835	ENSMUSP00000134721	TRANSLATION	protein_coding	-	CCDS80732.1	1	216	0	3.3	0.5	35.2	1	3,-2	-	-	10.002	MINOR
ENSMUSG00000051504	Siglech	ENSMUST00000172988	ENSMUSP00000134017	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000051504	Siglech	ENSMUST00000121492	ENSMUSP00000113665	TRANSLATION	protein_coding	-	CCDS80732.1	1	216	0	3.3	0.5	35.2	1	3,-2	-	-	10.002	MINOR
ENSMUSG00000094385	Vmn1r123	ENSMUST00000166948	ENSMUSP00000125823	TRANSLATION	protein_coding	-	CCDS52091.1	-	307	0	0	1.5	58.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000059087	Olfr698	ENSMUST00000214306	ENSMUSP00000149201	TRANSLATION	protein_coding	-	CCDS21669.1	5	311	0	0.36	5.4	168	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059087	Olfr698	ENSMUST00000074981	ENSMUSP00000074509	TRANSLATION	protein_coding	-	CCDS21669.1	-	311	0	0.36	5.4	168	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059087	Olfr698	ENSMUST00000216255	ENSMUSP00000149305	TRANSLATION	protein_coding	-	CCDS21669.1	5	311	0	0.36	5.4	168	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059087	Olfr698	ENSMUST00000215892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066101	Gm10153	ENSMUST00000210290	ENSMUSP00000147568	TRANSLATION	protein_coding	-	-	-	320	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000066101	Gm10153	ENSMUST00000084415	ENSMUSP00000081452	TRANSLATION	protein_coding	stop	-	5	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091874	Vmn1r56	ENSMUST00000169556	ENSMUSP00000128821	TRANSLATION	protein_coding	-	CCDS20761.1	-	310	0	0	0.5	64.7	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000059108	Ifitm6	ENSMUST00000211330	ENSMUSP00000147821	TRANSLATION	protein_coding	-	-	2	124	0	0	0	101.6	3	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000059108	Ifitm6	ENSMUST00000209328	ENSMUSP00000147357	TRANSLATION	protein_coding	-	CCDS21997.1	5	104	0	0	0.5	101.6	3	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000059108	Ifitm6	ENSMUST00000081924	ENSMUSP00000080594	TRANSLATION	protein_coding	-	CCDS21997.1	1	104	0	0	0.5	101.6	3	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000094757	Vmn1r242	ENSMUST00000168580	ENSMUSP00000131047	TRANSLATION	protein_coding	-	CCDS52071.1	-	306	0	0	1.5	58.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030894	Tpp1	ENSMUST00000211226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030894	Tpp1	ENSMUST00000211659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030894	Tpp1	ENSMUST00000211204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030894	Tpp1	ENSMUST00000210730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030894	Tpp1	ENSMUST00000210840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030894	Tpp1	ENSMUST00000211560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030894	Tpp1	ENSMUST00000210395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030894	Tpp1	ENSMUST00000210018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030894	Tpp1	ENSMUST00000033184	ENSMUSP00000033184	TRANSLATION	protein_coding	-	CCDS21661.1	1	562	10	12.16	6.3	0	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030894	Tpp1	ENSMUST00000210066	ENSMUSP00000147729	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	1.08	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000044824	Olfr545	ENSMUST00000058750	ENSMUSP00000052396	TRANSLATION	protein_coding	-	CCDS21533.1	-	316	0	0.2	1.5	245.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044824	Olfr545	ENSMUST00000216116	ENSMUSP00000150232	TRANSLATION	protein_coding	-	CCDS21533.1	3	316	0	0.2	1.5	245.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044824	Olfr545	ENSMUST00000217464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075701	Selenos	ENSMUST00000206044	ENSMUSP00000145998	TRANSLATION	protein_coding	-	-	3	100	0	1.5	1.2	179.5	0	-4,-5	-	-	3.494	MINOR
ENSMUSG00000075701	Selenos	ENSMUST00000206575	ENSMUSP00000145846	TRANSLATION	protein_coding	-	-	2	187	0	2.65	5.1	306.7	1	-4,-6	-	-	13.55	ALTERNATIVE:1
ENSMUSG00000075701	Selenos	ENSMUST00000101801	ENSMUSP00000099301	TRANSLATION	protein_coding	-	CCDS39977.1	1	190	0	2.65	5.1	314.2	1	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000075701	Selenos	ENSMUST00000205965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075701	Selenos	ENSMUST00000205279	ENSMUSP00000146218	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030525	Chrna7	ENSMUST00000032738	ENSMUSP00000032738	TRANSLATION	protein_coding	-	CCDS21329.1	1	502	0	7.46	2.8	455.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030525	Chrna7	ENSMUST00000208304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094197	Olfr474	ENSMUST00000054434	ENSMUSP00000055931	TRANSLATION	protein_coding	-	CCDS21697.1	-	310	0	0.2	2.7	132.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039099	Wdr93	ENSMUST00000035622	ENSMUSP00000037467	TRANSLATION	protein_coding	-	CCDS39992.1	1	695	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000030619	Eed	ENSMUST00000208643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030619	Eed	ENSMUST00000208977	ENSMUSP00000146812	TRANSLATION	protein_coding	stop	-	3	220	0	5.58	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030619	Eed	ENSMUST00000207568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000207980	ENSMUSP00000146892	TRANSLATION	protein_coding	start	-	3	118	0	3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030619	Eed	ENSMUST00000157001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000238981	ENSMUSP00000159149	TRANSLATION	protein_coding	-	CCDS40016.1	-	441	0	11.33	8.8	41.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030619	Eed	ENSMUST00000208196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000208245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000207609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000107234	ENSMUSP00000102853	TRANSLATION	protein_coding	-	CCDS40016.1	1	441	0	11.33	8.8	41.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030619	Eed	ENSMUST00000207996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030619	Eed	ENSMUST00000238792	ENSMUSP00000159171	TRANSLATION	protein_coding	-	-	-	500	0	11.33	0	41.2	0	-4,-7	-	-	12	MINOR
ENSMUSG00000025477	Inpp5a	ENSMUST00000026550	ENSMUSP00000026550	TRANSLATION	protein_coding	-	CCDS21954.1	1	422	0	3.165	1.5	60.5	0	-2,-5	-	-	12.18	MINOR
ENSMUSG00000025477	Inpp5a	ENSMUST00000106098	ENSMUSP00000101704	TRANSLATION	protein_coding	-	CCDS52428.1	1	412	0	3.165	12	60.5	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025477	Inpp5a	ENSMUST00000152475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025477	Inpp5a	ENSMUST00000210320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025477	Inpp5a	ENSMUST00000131781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025477	Inpp5a	ENSMUST00000097975	ENSMUSP00000095589	TRANSLATION	protein_coding	-	-	1	420	0	3.165	0.5	59.1	0	-3,-5	-	-	11.862	MINOR
ENSMUSG00000025477	Inpp5a	ENSMUST00000138183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047554	Tmem41b	ENSMUST00000125703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047554	Tmem41b	ENSMUST00000124821	ENSMUSP00000119520	TRANSLATION	nonsense_mediated_decay	-	-	3	94	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000047554	Tmem41b	ENSMUST00000207300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047554	Tmem41b	ENSMUST00000135565	ENSMUSP00000121078	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000047554	Tmem41b	ENSMUST00000119929	ENSMUSP00000113215	TRANSLATION	protein_coding	-	-	1	224	0	0	0	79.5	5	-4,-6	-	-	6	MINOR
ENSMUSG00000047554	Tmem41b	ENSMUST00000151587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047554	Tmem41b	ENSMUST00000118429	ENSMUSP00000112574	TRANSLATION	protein_coding	-	CCDS21742.1	1	291	0	0	5.1	79.5	7	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000047554	Tmem41b	ENSMUST00000154831	ENSMUSP00000123138	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047554	Tmem41b	ENSMUST00000094097	ENSMUSP00000091641	TRANSLATION	protein_coding	-	CCDS21742.1	1	291	0	0	5.1	79.5	7	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000025496	Drd4	ENSMUST00000209649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025496	Drd4	ENSMUST00000026569	ENSMUSP00000026569	TRANSLATION	protein_coding	-	CCDS22007.1	1	387	0	3.42	0.5	236.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000008028	1700008O03Rik	ENSMUST00000150034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008028	1700008O03Rik	ENSMUST00000150886	ENSMUSP00000123280	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	254.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008028	1700008O03Rik	ENSMUST00000107933	ENSMUSP00000103566	TRANSLATION	protein_coding	-	CCDS52230.1	1	196	0	0	1.7	264.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000008028	1700008O03Rik	ENSMUST00000134535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008028	1700008O03Rik	ENSMUST00000137946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003429	Rps11	ENSMUST00000211583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003429	Rps11	ENSMUST00000209838	ENSMUSP00000147907	TRANSLATION	protein_coding	start	-	5	135	0	3.75	0	186	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003429	Rps11	ENSMUST00000003521	ENSMUSP00000003521	TRANSLATION	protein_coding	-	CCDS39947.1	1	158	0	4.41	21.5	229.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003429	Rps11	ENSMUST00000211725	ENSMUSP00000147630	TRANSLATION	protein_coding	-	-	5	130	0	3.16	0	181.6	0	-4,-5	-	-	6.648	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000207580	ENSMUSP00000147206	TRANSLATION	protein_coding	-	-	5	123	0	0	0	96.9	2	-3,-5	-	-	2.538	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000208477	ENSMUSP00000147025	TRANSLATION	protein_coding	start	-	5	252	0	0	0	154.6	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000209032	ENSMUSP00000146406	TRANSLATION	protein_coding	-	-	5	260	0	0	0	154.6	4	-4,-7	-	-	6	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000208465	ENSMUSP00000146574	TRANSLATION	protein_coding	-	-	5	74	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000208939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035227	Spcs2	ENSMUST00000207063	ENSMUSP00000146514	TRANSLATION	protein_coding	-	-	2	190	0	0	0.5	154.6	4	-4,-5	-	-	6	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000207137	ENSMUSP00000146562	TRANSLATION	protein_coding	-	-	5	123	0	0	0	96.9	2	-3,-5	-	-	2.538	MINOR
ENSMUSG00000035227	Spcs2	ENSMUST00000036274	ENSMUSP00000041152	TRANSLATION	protein_coding	-	CCDS40033.1	1	226	0	0	5.1	154.6	4	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000035227	Spcs2	ENSMUST00000208562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035227	Spcs2	ENSMUST00000207406	ENSMUSP00000146850	TRANSLATION	nonsense_mediated_decay	-	-	5	177	0	0	0	109.9	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000030366	Ceacam12	ENSMUST00000032520	ENSMUSP00000032520	TRANSLATION	protein_coding	-	CCDS20867.1	1	300	0	1.18	0.5	33.9	0	-2,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000030366	Ceacam12	ENSMUST00000108487	ENSMUSP00000104127	TRANSLATION	protein_coding	-	CCDS52047.1	1	283	0	1.18	0.5	33.9	0	-2,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030366	Ceacam12	ENSMUST00000108483	ENSMUSP00000104123	TRANSLATION	protein_coding	-	CCDS52048.1	1	262	0	1.18	0.5	33.9	0	-2,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000038704	Aspdh	ENSMUST00000146128	ENSMUSP00000119474	TRANSLATION	protein_coding	stop	-	5	255	14	1.92	0	150.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038704	Aspdh	ENSMUST00000135624	ENSMUSP00000146347	TRANSLATION	protein_coding	stop	-	3	144	10	0.94	0	51.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038704	Aspdh	ENSMUST00000156957	ENSMUSP00000121766	TRANSLATION	protein_coding	start	-	5	169	6	0.98	0	82.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038704	Aspdh	ENSMUST00000133801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038704	Aspdh	ENSMUST00000152902	ENSMUSP00000114410	TRANSLATION	nonsense_mediated_decay	-	-	3	44	2	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038704	Aspdh	ENSMUST00000207591	-	NO_TRANSLATION	TEC
ENSMUSG00000038704	Aspdh	ENSMUST00000035929	ENSMUSP00000039202	TRANSLATION	protein_coding	-	CCDS21207.1	1	287	19	2.32	1.5	160.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000054236	Olfr481	ENSMUST00000213601	ENSMUSP00000151152	TRANSLATION	protein_coding	-	CCDS21703.1	5	312	0	0.2	7.6	169.1	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000054236	Olfr481	ENSMUST00000067143	ENSMUSP00000063555	TRANSLATION	protein_coding	-	CCDS21703.1	-	312	0	0.2	7.6	169.1	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039428	Tmem135	ENSMUST00000154434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039428	Tmem135	ENSMUST00000156153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039428	Tmem135	ENSMUST00000117852	ENSMUSP00000114097	TRANSLATION	protein_coding	-	-	1	371	0	0	0	275.5	3	-4,-6	-	-	6	MINOR
ENSMUSG00000039428	Tmem135	ENSMUST00000139320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039428	Tmem135	ENSMUST00000207335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039428	Tmem135	ENSMUST00000136267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039428	Tmem135	ENSMUST00000124477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039428	Tmem135	ENSMUST00000041968	ENSMUSP00000042783	TRANSLATION	protein_coding	-	CCDS21440.1	1	458	0	0	7.5	275.5	4	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039428	Tmem135	ENSMUST00000137723	ENSMUSP00000114866	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	142.4	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000030598	Fbxo17	ENSMUST00000108278	ENSMUSP00000103913	TRANSLATION	nonsense_mediated_decay	-	-	2	286	0	3.7	0.5	265.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030598	Fbxo17	ENSMUST00000032818	ENSMUSP00000032818	TRANSLATION	protein_coding	-	CCDS39863.2	1	286	0	3.7	0.5	265.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030598	Fbxo17	ENSMUST00000108279	ENSMUSP00000103914	TRANSLATION	protein_coding	-	CCDS80688.1	1	242	0	2.7	0.5	191.7	0	-4,-1	-	-	5.568	MINOR
ENSMUSG00000030598	Fbxo17	ENSMUST00000139172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030598	Fbxo17	ENSMUST00000167118	ENSMUSP00000130422	TRANSLATION	protein_coding	-	CCDS39863.2	5	286	0	3.7	0.5	265.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030884	Uqcrc2	ENSMUST00000208400	ENSMUSP00000146732	TRANSLATION	protein_coding	stop	-	3	145	0	4.08	0	65	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030884	Uqcrc2	ENSMUST00000150675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030884	Uqcrc2	ENSMUST00000137808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030884	Uqcrc2	ENSMUST00000033176	ENSMUSP00000033176	TRANSLATION	protein_coding	-	CCDS21795.1	1	453	0	11.41	7.5	188.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000030884	Uqcrc2	ENSMUST00000131191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030884	Uqcrc2	ENSMUST00000123704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096465	Olfr488	ENSMUST00000211508	ENSMUSP00000147652	TRANSLATION	protein_coding	-	CCDS21709.1	3	314	0	0.2	2.7	175.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096465	Olfr488	ENSMUST00000072968	ENSMUSP00000072735	TRANSLATION	protein_coding	-	CCDS21709.1	-	314	0	0.2	2.7	175.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096465	Olfr488	ENSMUST00000215173	ENSMUSP00000149427	TRANSLATION	protein_coding	-	CCDS21709.1	3	314	0	0.2	2.7	175.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000110206	Flt3l	ENSMUST00000211542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110206	Flt3l	ENSMUST00000210818	ENSMUSP00000147324	TRANSLATION	nonsense_mediated_decay	-	-	1	169	0	3.3	0	203.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000110206	Flt3l	ENSMUST00000211429	ENSMUSP00000147468	TRANSLATION	protein_coding	-	-	1	255	0	3.63	0	207.4	2	0,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000110206	Flt3l	ENSMUST00000210197	ENSMUSP00000148009	TRANSLATION	protein_coding	-	-	5	276	0	3.3	0	203.8	2	0,2	-	-	11.124	ALTERNATIVE:2
ENSMUSG00000110206	Flt3l	ENSMUST00000211246	ENSMUSP00000147278	TRANSLATION	protein_coding	-	-	1	220	0	3.63	0	207.4	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000110206	Flt3l	ENSMUST00000210175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110206	Flt3l	ENSMUST00000211503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110206	Flt3l	ENSMUST00000146760	ENSMUSP00000123506	TRANSLATION	protein_coding	-	CCDS39948.1	1	232	0	3.63	0.5	207.4	2	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000110206	Flt3l	ENSMUST00000210083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110206	Flt3l	ENSMUST00000209612	ENSMUSP00000147578	TRANSLATION	protein_coding	start/stop	-	1	36	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000110206	Flt3l	ENSMUST00000209238	ENSMUSP00000148156	TRANSLATION	nonsense_mediated_decay	-	-	5	232	0	3.63	0.5	207.4	2	4,-1	-	-	-1	MINOR
ENSMUSG00000110206	Flt3l	ENSMUST00000210832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110206	Flt3l	ENSMUST00000210612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040488	Ltbp4	ENSMUST00000121175	ENSMUSP00000113674	TRANSLATION	protein_coding	-	CCDS52158.1	1	1600	119	11.92	0.5	727.8	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000040488	Ltbp4	ENSMUST00000038618	ENSMUSP00000037536	TRANSLATION	protein_coding	-	CCDS21017.1	1	1666	119	11.92	0.5	727.8	0	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000040488	Ltbp4	ENSMUST00000206413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040488	Ltbp4	ENSMUST00000129471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040488	Ltbp4	ENSMUST00000125455	ENSMUSP00000120326	TRANSLATION	protein_coding	start/stop	-	3	228	0	1.48	0	106	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040488	Ltbp4	ENSMUST00000108369	ENSMUSP00000104006	TRANSLATION	protein_coding	-	-	5	1665	119	11.92	0	727.8	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040488	Ltbp4	ENSMUST00000118583	ENSMUSP00000113523	TRANSLATION	protein_coding	-	-	1	1558	111	11.92	0	693.6	0	4,-1	-	-	10.614	MINOR
ENSMUSG00000040488	Ltbp4	ENSMUST00000148594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040488	Ltbp4	ENSMUST00000134464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030614	Tmem126b	ENSMUST00000032843	ENSMUSP00000032843	TRANSLATION	protein_coding	-	CCDS21448.1	1	230	0	0	1.5	231.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030614	Tmem126b	ENSMUST00000123622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051591	Olfr697	ENSMUST00000217734	ENSMUSP00000152039	TRANSLATION	protein_coding	-	CCDS21668.1	5	317	0	0.36	0.5	157.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051591	Olfr697	ENSMUST00000050541	ENSMUSP00000055207	TRANSLATION	protein_coding	-	CCDS21668.1	-	317	0	0.36	0.5	157.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052273	Dnah3	ENSMUST00000046993	ENSMUSP00000042857	TRANSLATION	protein_coding	-	-	5	4083	64	28.766	0	2592.9	0	-4,-6	-	-	16.476	MINOR
ENSMUSG00000052273	Dnah3	ENSMUST00000209154	ENSMUSP00000146895	TRANSLATION	protein_coding	-	-	5	4072	64	29.03	1.5	2609.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000052273	Dnah3	ENSMUST00000213993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052273	Dnah3	ENSMUST00000208910	ENSMUSP00000146748	TRANSLATION	protein_coding	start	-	1	351	10	2.83	0	206.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052273	Dnah3	ENSMUST00000208701	ENSMUSP00000146733	TRANSLATION	protein_coding	start	-	1	978	0	4.92	0	1029.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052273	Dnah3	ENSMUST00000213149	ENSMUSP00000151144	TRANSLATION	nonsense_mediated_decay	start	-	5	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073977	Olfr549	ENSMUST00000217478	ENSMUSP00000150373	TRANSLATION	protein_coding	-	CCDS21534.1	5	316	0	0.3	5.3	349	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073977	Olfr549	ENSMUST00000098227	ENSMUSP00000095829	TRANSLATION	protein_coding	-	CCDS21534.1	-	316	0	0.3	5.3	349	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030380	Mzf1	ENSMUST00000183176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030380	Mzf1	ENSMUST00000182515	ENSMUSP00000138387	TRANSLATION	protein_coding	-	CCDS20826.1	1	735	52	1.6	1.5	375.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030380	Mzf1	ENSMUST00000069289	ENSMUSP00000069122	TRANSLATION	protein_coding	-	-	1	320	0	1	0	123	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000030380	Mzf1	ENSMUST00000182490	ENSMUSP00000138271	TRANSLATION	protein_coding	-	-	1	814	52	1.6	0.5	375.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000030380	Mzf1	ENSMUST00000182293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030380	Mzf1	ENSMUST00000210727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030380	Mzf1	ENSMUST00000182087	ENSMUSP00000138163	TRANSLATION	protein_coding	-	-	1	190	0	1	0	123	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000058976	Usp17lc	ENSMUST00000079348	ENSMUSP00000078323	TRANSLATION	protein_coding	-	CCDS21572.1	1	545	8	0.42	0.5	175.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058976	Usp17lc	ENSMUST00000106892	ENSMUSP00000102505	TRANSLATION	protein_coding	-	-	1	545	8	0.42	0.5	175.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000117744	Vmn1r59	ENSMUST00000236678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117744	Vmn1r59	ENSMUST00000237385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117744	Vmn1r59	ENSMUST00000074132	ENSMUSP00000073768	TRANSLATION	protein_coding	-	CCDS20763.1	-	310	0	0	0.5	54.4	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000048481	Mypop	ENSMUST00000131087	ENSMUSP00000117357	TRANSLATION	protein_coding	-	CCDS39792.1	5	393	0	0	0.5	69	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048481	Mypop	ENSMUST00000059331	ENSMUSP00000058718	TRANSLATION	protein_coding	-	CCDS39792.1	5	393	0	0	0.5	69	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048481	Mypop	ENSMUST00000130268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005447	Pafah1b3	ENSMUST00000148828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005447	Pafah1b3	ENSMUST00000108410	ENSMUSP00000104048	TRANSLATION	protein_coding	-	-	3	180	4	3.33	0	58.9	0	-4,-5	-	-	12.868	MINOR
ENSMUSG00000005447	Pafah1b3	ENSMUST00000149634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005447	Pafah1b3	ENSMUST00000155118	ENSMUSP00000120379	TRANSLATION	protein_coding	-	-	1	157	3	3.5	0	35.3	0	-4,-5	-	-	9.858	MINOR
ENSMUSG00000005447	Pafah1b3	ENSMUST00000005583	ENSMUSP00000005583	TRANSLATION	protein_coding	-	CCDS20979.1	1	232	5	4.83	7.5	60.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000005447	Pafah1b3	ENSMUST00000140093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005447	Pafah1b3	ENSMUST00000148150	ENSMUSP00000121250	TRANSLATION	protein_coding	stop	-	2	143	3	3.83	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042178	Armc5	ENSMUST00000206509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042178	Armc5	ENSMUST00000044660	ENSMUSP00000040568	TRANSLATION	protein_coding	-	CCDS21892.1	1	926	0	1.38	1.5	20.9	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000047037	Nipa1	ENSMUST00000052204	ENSMUSP00000053871	TRANSLATION	protein_coding	-	CCDS21317.1	1	323	0	0	3.9	280.3	0	-2,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000025495	Ptdss2	ENSMUST00000172787	ENSMUSP00000133352	TRANSLATION	protein_coding	stop	-	3	190	0	0	0	185.5	4	0,-4	-	-	-1	MINOR
ENSMUSG00000025495	Ptdss2	ENSMUST00000026568	ENSMUSP00000026568	TRANSLATION	protein_coding	-	CCDS22001.1	1	473	0	0	1.5	369.8	9	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025495	Ptdss2	ENSMUST00000174058	ENSMUSP00000134176	TRANSLATION	nonsense_mediated_decay	-	-	3	80	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025495	Ptdss2	ENSMUST00000173572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025495	Ptdss2	ENSMUST00000174706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025495	Ptdss2	ENSMUST00000172479	ENSMUSP00000133804	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000025495	Ptdss2	ENSMUST00000210026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025495	Ptdss2	ENSMUST00000209928	ENSMUSP00000147593	TRANSLATION	protein_coding	start	-	3	50	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000025495	Ptdss2	ENSMUST00000174373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025495	Ptdss2	ENSMUST00000173721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025495	Ptdss2	ENSMUST00000174612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066406	Akap13	ENSMUST00000207923	ENSMUSP00000146990	TRANSLATION	protein_coding	start/stop	-	1	870	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066406	Akap13	ENSMUST00000208187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000239346	ENSMUSP00000159238	TRANSLATION	protein_coding	stop	-	-	121	3	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000066406	Akap13	ENSMUST00000207511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000207239	ENSMUSP00000146401	TRANSLATION	protein_coding	stop	-	1	607	8	7.28	0	132.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066406	Akap13	ENSMUST00000208456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066406	Akap13	ENSMUST00000208708	ENSMUSP00000146779	TRANSLATION	protein_coding	start/stop	-	5	569	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066406	Akap13	ENSMUST00000207998	ENSMUSP00000146503	TRANSLATION	protein_coding	start/stop	-	1	423	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066406	Akap13	ENSMUST00000166315	ENSMUSP00000129784	TRANSLATION	protein_coding	-	CCDS52276.1	5	2776	8	7.52	0.5	132.9	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000066406	Akap13	ENSMUST00000208053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000207079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000207750	ENSMUSP00000147237	TRANSLATION	protein_coding	-	-	5	2794	8	7.52	0.5	132.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000066406	Akap13	ENSMUST00000209040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066406	Akap13	ENSMUST00000208182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000208009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000208248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066406	Akap13	ENSMUST00000207751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030731	Syt3	ENSMUST00000120262	ENSMUSP00000112968	TRANSLATION	protein_coding	-	CCDS21205.1	5	587	24	5.75	1.5	171.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030731	Syt3	ENSMUST00000118962	ENSMUSP00000114070	TRANSLATION	protein_coding	-	CCDS21205.1	5	587	24	5.75	1.5	171.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030731	Syt3	ENSMUST00000118831	ENSMUSP00000112432	TRANSLATION	protein_coding	-	CCDS21205.1	5	587	24	5.75	1.5	171.7	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030731	Syt3	ENSMUST00000130844	ENSMUSP00000118158	TRANSLATION	protein_coding	stop	-	2	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030731	Syt3	ENSMUST00000130707	ENSMUSP00000116926	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030731	Syt3	ENSMUST00000132399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030967	Zranb1	ENSMUST00000033265	ENSMUSP00000033265	TRANSLATION	protein_coding	-	CCDS21929.1	2	708	12	7.95	6.3	171.6	0	-4,-5	-	-	20.445	PRINCIPAL:2
ENSMUSG00000030967	Zranb1	ENSMUST00000153335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030967	Zranb1	ENSMUST00000210507	ENSMUSP00000147317	TRANSLATION	nonsense_mediated_decay	-	-	1	372	12	1.2	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030967	Zranb1	ENSMUST00000215716	ENSMUSP00000148867	TRANSLATION	protein_coding	-	-	5	734	12	7.95	7.5	171.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000030967	Zranb1	ENSMUST00000106157	ENSMUSP00000101763	TRANSLATION	protein_coding	-	CCDS21929.1	5	708	12	7.95	6.3	171.6	0	-4,-5	-	-	20.445	PRINCIPAL:2
ENSMUSG00000056043	Rgs9bp	ENSMUST00000069912	ENSMUSP00000065511	TRANSLATION	protein_coding	-	CCDS21153.1	-	237	0	0	2.9	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000063439	B9d2	ENSMUST00000206913	ENSMUSP00000145950	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	58.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063439	B9d2	ENSMUST00000108403	ENSMUSP00000104040	TRANSLATION	protein_coding	-	CCDS20992.1	1	175	0	0	11.5	205.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000063439	B9d2	ENSMUST00000205325	ENSMUSP00000145729	TRANSLATION	protein_coding	-	-	2	115	0	0	0	78.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000063439	B9d2	ENSMUST00000205658	ENSMUSP00000146289	TRANSLATION	protein_coding	-	CCDS20992.1	1	175	0	0	11.5	205.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000030486	Zfp108	ENSMUST00000072713	ENSMUSP00000072496	TRANSLATION	protein_coding	-	-	5	642	52	1.4	0.5	336.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030486	Zfp108	ENSMUST00000205982	ENSMUSP00000145844	TRANSLATION	protein_coding	-	CCDS85236.1	1	642	52	1.4	0.5	336.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030486	Zfp108	ENSMUST00000206777	ENSMUSP00000145928	TRANSLATION	protein_coding	-	CCDS85236.1	1	642	52	1.4	0.5	336.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000177983	ENSMUSP00000137538	TRANSLATION	protein_coding	-	-	2	55	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000178890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000178876	ENSMUSP00000146135	TRANSLATION	protein_coding	-	-	1	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000179525	ENSMUSP00000145694	TRANSLATION	protein_coding	-	-	2	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000179503	ENSMUSP00000145884	TRANSLATION	protein_coding	-	-	5	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000178207	ENSMUSP00000146124	TRANSLATION	protein_coding	-	-	1	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000067854	ENSMUSP00000070449	TRANSLATION	protein_coding	-	-	5	141	0	0	8.3	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000165308	ENSMUSP00000130271	TRANSLATION	protein_coding	-	-	5	141	0	0	8.3	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000054676	1600014C10Rik	ENSMUST00000179992	ENSMUSP00000145679	TRANSLATION	protein_coding	-	-	3	83	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050266	Olfr690	ENSMUST00000216230	ENSMUSP00000150831	TRANSLATION	protein_coding	-	CCDS52349.1	5	315	0	0.48	4	365.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000050266	Olfr690	ENSMUST00000061920	ENSMUSP00000061272	TRANSLATION	protein_coding	-	CCDS52349.1	-	315	0	0.48	4	365.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000050266	Olfr690	ENSMUST00000211006	ENSMUSP00000147414	TRANSLATION	protein_coding	-	CCDS52349.1	2	315	0	0.48	4	365.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000064194	Zfp936	ENSMUST00000205912	ENSMUSP00000145999	TRANSLATION	protein_coding	stop	-	3	181	5	2.45	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064194	Zfp936	ENSMUST00000202535	ENSMUSP00000143800	TRANSLATION	protein_coding	-	CCDS80709.1	1	456	44	2.95	0.5	261	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000064194	Zfp936	ENSMUST00000200973	ENSMUSP00000144191	TRANSLATION	protein_coding	-	-	3	86	0	1.75	0	82.1	0	-4,-5	-	-	3.558	MINOR
ENSMUSG00000064194	Zfp936	ENSMUST00000072829	ENSMUSP00000072608	TRANSLATION	protein_coding	start	-	5	455	44	2.95	0.5	261	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002265	Peg3	ENSMUST00000155910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002265	Peg3	ENSMUST00000239104	ENSMUSP00000159154	TRANSLATION	protein_coding	-	-	-	1632	40	0	0	130.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000002265	Peg3	ENSMUST00000143703	ENSMUSP00000122423	TRANSLATION	nonsense_mediated_decay	-	-	5	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002265	Peg3	ENSMUST00000150182	ENSMUSP00000116161	TRANSLATION	nonsense_mediated_decay	-	-	1	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002265	Peg3	ENSMUST00000051209	ENSMUSP00000050750	TRANSLATION	protein_coding	-	CCDS20783.1	1	1571	40	0	0.5	130.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030402	Ppm1n	ENSMUST00000206782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030402	Ppm1n	ENSMUST00000205498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030402	Ppm1n	ENSMUST00000205792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030402	Ppm1n	ENSMUST00000032560	ENSMUSP00000032560	TRANSLATION	protein_coding	-	CCDS20895.1	1	404	13	3.25	1.5	302.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006649	Nphs1	ENSMUST00000126297	ENSMUSP00000116500	TRANSLATION	protein_coding	-	-	1	1242	0	13.24	0.5	324.5	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000006649	Nphs1	ENSMUST00000006825	ENSMUSP00000006825	TRANSLATION	protein_coding	-	CCDS39884.1	1	1256	0	13.24	1.5	324.5	1	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000006649	Nphs1	ENSMUST00000149086	ENSMUSP00000119601	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006649	Nphs1	ENSMUST00000123880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006649	Nphs1	ENSMUST00000131004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050382	Kif7	ENSMUST00000059836	ENSMUSP00000061806	TRANSLATION	protein_coding	-	CCDS52278.1	1	1347	12	3.6	0.5	342.9	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000050382	Kif7	ENSMUST00000183846	ENSMUSP00000139359	TRANSLATION	protein_coding	-	CCDS80739.1	5	1348	12	3.6	0.5	342.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000050382	Kif7	ENSMUST00000178048	ENSMUSP00000136993	TRANSLATION	protein_coding	-	CCDS80739.1	1	1348	12	3.6	0.5	342.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000050382	Kif7	ENSMUST00000184137	ENSMUSP00000139224	TRANSLATION	protein_coding	-	CCDS52278.1	5	1347	12	3.6	0.5	342.9	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000091962	Vmn2r78	ENSMUST00000170835	ENSMUSP00000126698	TRANSLATION	protein_coding	-	CCDS52302.1	5	853	5	2.64	0.5	367.5	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000091962	Vmn2r78	ENSMUST00000233868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091962	Vmn2r78	ENSMUST00000233033	ENSMUSP00000156510	TRANSLATION	protein_coding	-	-	-	563	3	2.16	0	153.7	0	2,-2	-	-	7.908	MINOR
ENSMUSG00000091962	Vmn2r78	ENSMUST00000232924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000131	Xpo6	ENSMUST00000166538	ENSMUSP00000127323	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000168564	ENSMUSP00000129881	TRANSLATION	nonsense_mediated_decay	start	-	3	132	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000167268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000131	Xpo6	ENSMUST00000169059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000131	Xpo6	ENSMUST00000165608	ENSMUSP00000128919	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000167147	ENSMUSP00000132462	TRANSLATION	nonsense_mediated_decay	-	-	5	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000167315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000131	Xpo6	ENSMUST00000168933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000131	Xpo6	ENSMUST00000165660	ENSMUSP00000132958	TRANSLATION	protein_coding	start/stop	-	5	135	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000166368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000131	Xpo6	ENSMUST00000164741	ENSMUSP00000132205	TRANSLATION	protein_coding	start/stop	-	5	255	0	0.48	0	40.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000168189	ENSMUSP00000130527	TRANSLATION	protein_coding	-	CCDS80800.1	1	1125	0	1.576	12.8	113.3	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000000131	Xpo6	ENSMUST00000166719	ENSMUSP00000131299	TRANSLATION	nonsense_mediated_decay	start	-	3	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000168649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000131	Xpo6	ENSMUST00000206784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000131	Xpo6	ENSMUST00000170675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000131	Xpo6	ENSMUST00000163959	ENSMUSP00000128058	TRANSLATION	protein_coding	stop	-	3	28	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000166540	ENSMUSP00000129658	TRANSLATION	nonsense_mediated_decay	start	-	5	142	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000131	Xpo6	ENSMUST00000009344	ENSMUSP00000009344	TRANSLATION	protein_coding	-	CCDS52396.1	1	1124	0	1.576	12.8	113.3	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000000131	Xpo6	ENSMUST00000171861	ENSMUSP00000126904	TRANSLATION	nonsense_mediated_decay	start	-	5	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000115027	Vmn1r81	ENSMUST00000227080	ENSMUSP00000153719	TRANSLATION	protein_coding	-	-	-	339	0	0	0	95.9	5	-2,-5	-	-	5.646	MINOR
ENSMUSG00000115027	Vmn1r81	ENSMUST00000228764	ENSMUSP00000153767	TRANSLATION	protein_coding	-	CCDS20806.1	-	306	0	0	1.5	101.8	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115027	Vmn1r81	ENSMUST00000228482	ENSMUSP00000153780	TRANSLATION	protein_coding	-	-	-	339	0	0	0	95.9	5	-2,-5	-	-	5.646	MINOR
ENSMUSG00000115027	Vmn1r81	ENSMUST00000086232	ENSMUSP00000083409	TRANSLATION	protein_coding	-	CCDS20806.1	-	306	0	0	1.5	101.8	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115027	Vmn1r81	ENSMUST00000227973	ENSMUSP00000154529	TRANSLATION	protein_coding	-	CCDS20806.1	-	306	0	0	1.5	101.8	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090806	Vmn2r70	ENSMUST00000233631	ENSMUSP00000156674	TRANSLATION	protein_coding	-	-	-	821	4	3.37	0	342	7	-2,-5	-	-	15.136	ALTERNATIVE:2
ENSMUSG00000090806	Vmn2r70	ENSMUST00000168230	ENSMUSP00000129703	TRANSLATION	protein_coding	-	CCDS52292.1	5	854	4	3.67	0.5	346.4	7	-2,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000005686	Ampd3	ENSMUST00000106686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005686	Ampd3	ENSMUST00000170374	ENSMUSP00000130495	TRANSLATION	protein_coding	-	CCDS21747.1	1	766	6	9.8196	1.5	458.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000005686	Ampd3	ENSMUST00000143786	ENSMUSP00000120983	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005686	Ampd3	ENSMUST00000005829	ENSMUSP00000005829	TRANSLATION	protein_coding	-	CCDS21747.1	1	766	6	9.8196	1.5	458.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000005686	Ampd3	ENSMUST00000148292	ENSMUSP00000122657	TRANSLATION	protein_coding	stop	-	3	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005686	Ampd3	ENSMUST00000213373	ENSMUSP00000149655	TRANSLATION	protein_coding	-	-	5	775	6	9.8196	1.5	458.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000005686	Ampd3	ENSMUST00000176487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005686	Ampd3	ENSMUST00000147587	ENSMUSP00000121238	TRANSLATION	protein_coding	stop	-	2	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046185	Zfp84	ENSMUST00000032802	ENSMUSP00000032802	TRANSLATION	protein_coding	-	CCDS21074.1	1	559	44	1.4	1.5	266.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030772	Dkk3	ENSMUST00000033036	ENSMUSP00000033036	TRANSLATION	protein_coding	-	CCDS21752.1	1	349	0	0.72	2.7	58.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000030770	Parva	ENSMUST00000139720	ENSMUSP00000118587	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030770	Parva	ENSMUST00000106643	ENSMUSP00000102254	TRANSLATION	protein_coding	-	CCDS40091.1	1	372	0	4.33	5.2	121.9	0	-4,-6	-	-	13.8	MINOR
ENSMUSG00000030770	Parva	ENSMUST00000126047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030770	Parva	ENSMUST00000033030	ENSMUSP00000033030	TRANSLATION	protein_coding	-	CCDS40091.1	1	372	0	4.33	5.2	121.9	0	-4,-6	-	-	13.8	MINOR
ENSMUSG00000030770	Parva	ENSMUST00000106640	ENSMUSP00000102251	TRANSLATION	protein_coding	-	-	1	336	0	4.33	8	121.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073856	Iqck	ENSMUST00000208658	ENSMUSP00000147000	TRANSLATION	protein_coding	-	-	-	101	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000073856	Iqck	ENSMUST00000132148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073856	Iqck	ENSMUST00000152136	ENSMUSP00000118456	TRANSLATION	nonsense_mediated_decay	-	-	1	137	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073856	Iqck	ENSMUST00000153518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073856	Iqck	ENSMUST00000098087	ENSMUSP00000095693	TRANSLATION	protein_coding	-	-	5	290	0	0	1.5	24.6	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000073856	Iqck	ENSMUST00000106547	ENSMUSP00000102157	TRANSLATION	protein_coding	-	CCDS40105.1	5	287	0	0	1.5	24.6	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000030410	Dmwd	ENSMUST00000146429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030410	Dmwd	ENSMUST00000032570	ENSMUSP00000032570	TRANSLATION	protein_coding	-	CCDS20888.2	1	665	0	1.86	0.5	34	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030410	Dmwd	ENSMUST00000108479	ENSMUSP00000104119	TRANSLATION	protein_coding	-	-	5	640	0	1.86	0	34	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030410	Dmwd	ENSMUST00000138997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030423	Pop4	ENSMUST00000206045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030423	Pop4	ENSMUST00000032585	ENSMUSP00000032585	TRANSLATION	protein_coding	-	CCDS39915.1	1	221	0	0	3.9	92.4	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000030423	Pop4	ENSMUST00000205959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030423	Pop4	ENSMUST00000206221	ENSMUSP00000145810	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030423	Pop4	ENSMUST00000205753	ENSMUSP00000146119	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030423	Pop4	ENSMUST00000205899	ENSMUSP00000146204	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102252	Snrpn	ENSMUST00000059305	ENSMUSP00000055941	TRANSLATION	protein_coding	-	CCDS39974.1	1	240	5	4	7.5	70.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000102252	Snrpn	ENSMUST00000098402	ENSMUSP00000096003	TRANSLATION	protein_coding	-	CCDS39974.1	5	240	5	4	7.5	70.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000030431	Tmem238	ENSMUST00000168578	ENSMUSP00000130452	TRANSLATION	protein_coding	-	CCDS51977.1	1	176	0	0	3.9	99.2	0	-1,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000030431	Tmem238	ENSMUST00000206315	ENSMUSP00000146208	TRANSLATION	nonsense_mediated_decay	start	-	3	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042797	Aqp11	ENSMUST00000205932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042797	Aqp11	ENSMUST00000206389	ENSMUSP00000146215	TRANSLATION	protein_coding	-	CCDS21463.1	1	271	0	0	7.5	32.6	5	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000042797	Aqp11	ENSMUST00000205737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042797	Aqp11	ENSMUST00000084986	ENSMUSP00000082054	TRANSLATION	protein_coding	start	-	1	216	0	0	0	0	4	4,-1	-	-	-1	MINOR
ENSMUSG00000042797	Aqp11	ENSMUST00000205784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054893	Zfp667	ENSMUST00000153840	ENSMUSP00000146573	TRANSLATION	protein_coding	-	-	3	89	0	1	0	84.6	0	-4,-6	-	-	4.284	MINOR
ENSMUSG00000054893	Zfp667	ENSMUST00000086327	ENSMUSP00000083507	TRANSLATION	protein_coding	-	CCDS20773.1	1	609	56	1.4	1.5	317.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000054893	Zfp667	ENSMUST00000147784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054893	Zfp667	ENSMUST00000108562	ENSMUSP00000104202	TRANSLATION	protein_coding	-	CCDS20773.1	2	609	56	1.4	1.5	317.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000054893	Zfp667	ENSMUST00000170776	ENSMUSP00000128658	TRANSLATION	protein_coding	-	CCDS20773.1	1	609	56	1.4	1.5	317.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030905	Crym	ENSMUST00000134067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030905	Crym	ENSMUST00000033198	ENSMUSP00000033198	TRANSLATION	protein_coding	-	CCDS21794.1	1	313	21	7.25	8.8	365.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000089942	Pira2	ENSMUST00000108615	ENSMUSP00000104255	TRANSLATION	protein_coding	-	CCDS39731.1	1	680	0	6.1	0.5	127.9	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000089942	Pira2	ENSMUST00000119469	ENSMUSP00000113857	TRANSLATION	protein_coding	-	-	1	663	0	5.8	1.5	127.9	0	3,-2	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000003269	Cyth2	ENSMUST00000056820	ENSMUSP00000051423	TRANSLATION	protein_coding	-	-	1	400	12	9.9	10.3	320.4	0	-4,-5	-	-	20.94	ALTERNATIVE:1
ENSMUSG00000003269	Cyth2	ENSMUST00000210898	ENSMUSP00000147275	TRANSLATION	protein_coding	start	-	5	140	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000210137	ENSMUSP00000147723	TRANSLATION	nonsense_mediated_decay	start	-	5	124	0	2.4	0	53.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000209245	ENSMUSP00000147457	TRANSLATION	nonsense_mediated_decay	-	-	5	292	0	6.4	0	224.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000210853	ENSMUSP00000147451	TRANSLATION	nonsense_mediated_decay	-	-	5	283	0	6.466	0	224.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000223361	ENSMUSP00000152189	TRANSLATION	protein_coding	start/stop	-	5	202	12	5.25	0	169.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000107729	ENSMUSP00000103357	TRANSLATION	protein_coding	-	CCDS52249.1	1	399	12	9.9	10.3	321.4	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000003269	Cyth2	ENSMUST00000211263	ENSMUSP00000147587	TRANSLATION	protein_coding	stop	-	5	166	0	4.23	0	141.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003269	Cyth2	ENSMUST00000211783	ENSMUSP00000147706	TRANSLATION	protein_coding	-	-	5	383	12	9.9	1	321.4	0	-4,-6	-	-	18	MINOR
ENSMUSG00000095806	Vmn1r244	ENSMUST00000105209	ENSMUSP00000100844	TRANSLATION	protein_coding	-	CCDS71898.1	-	305	0	0	1.5	49.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030681	Mvp	ENSMUST00000165096	ENSMUSP00000127250	TRANSLATION	protein_coding	-	CCDS40136.2	1	870	0	14.25	1.5	368	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030681	Mvp	ENSMUST00000133172	ENSMUSP00000119213	TRANSLATION	protein_coding	stop	-	3	134	0	2.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030681	Mvp	ENSMUST00000206511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062434	Olfr516	ENSMUST00000216092	ENSMUSP00000149160	TRANSLATION	protein_coding	-	CCDS21728.1	5	314	0	0.42	7.5	201.4	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062434	Olfr516	ENSMUST00000217279	ENSMUSP00000150359	TRANSLATION	protein_coding	-	CCDS21728.1	5	314	0	0.42	7.5	201.4	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062434	Olfr516	ENSMUST00000071410	ENSMUSP00000071358	TRANSLATION	protein_coding	-	CCDS21728.1	-	314	0	0.42	7.5	201.4	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030970	Ctbp2	ENSMUST00000171882	ENSMUSP00000129312	TRANSLATION	protein_coding	stop	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000166400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000172341	ENSMUSP00000127701	TRANSLATION	protein_coding	stop	-	3	176	4	3	0	86.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000165534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000166439	ENSMUSP00000127448	TRANSLATION	protein_coding	-	-	1	420	27	8	4.1	289.6	0	-4,-5	-	-	18.861	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000168958	ENSMUSP00000132892	TRANSLATION	protein_coding	stop	-	3	188	9	4	0	121.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000033269	ENSMUSP00000033269	TRANSLATION	protein_coding	-	CCDS21930.1	1	445	27	8	11.8	289.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030970	Ctbp2	ENSMUST00000163601	ENSMUSP00000128944	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000167218	ENSMUSP00000133269	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000171022	ENSMUSP00000132399	TRANSLATION	protein_coding	stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000171968	ENSMUSP00000130727	TRANSLATION	protein_coding	stop	-	2	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000168238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030970	Ctbp2	ENSMUST00000168762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000170459	ENSMUSP00000129590	TRANSLATION	protein_coding	stop	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000169570	ENSMUSP00000130294	TRANSLATION	protein_coding	-	CCDS52417.1	5	988	27	8	1.5	289.6	0	-4,-6	-	-	18.138	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000164896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000171727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000164739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030970	Ctbp2	ENSMUST00000165457	ENSMUSP00000126126	TRANSLATION	nonsense_mediated_decay	-	-	1	188	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030970	Ctbp2	ENSMUST00000155996	ENSMUSP00000132558	TRANSLATION	protein_coding	stop	-	5	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060621	Nkpd1	ENSMUST00000214205	ENSMUSP00000151162	TRANSLATION	protein_coding	-	-	5	675	0	0	1	92.3	3	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000060621	Nkpd1	ENSMUST00000078908	ENSMUSP00000077943	TRANSLATION	protein_coding	-	CCDS52059.1	1	825	0	0	0.5	91.5	3	-4,-5	-	-	5.946	PRINCIPAL:2
ENSMUSG00000060621	Nkpd1	ENSMUST00000207576	ENSMUSP00000147092	TRANSLATION	protein_coding	-	CCDS52059.1	5	825	0	0	0.5	91.5	3	-4,-5	-	-	5.946	PRINCIPAL:2
ENSMUSG00000025481	Urah	ENSMUST00000209978	ENSMUSP00000147888	TRANSLATION	protein_coding	start	-	3	153	1	2.33	0	74.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025481	Urah	ENSMUST00000106050	ENSMUSP00000101665	TRANSLATION	protein_coding	-	CCDS85453.1	2	141	2	3.41	1.5	132.4	0	-4,-1	-	-	14.25	ALTERNATIVE:2
ENSMUSG00000025481	Urah	ENSMUST00000210916	ENSMUSP00000147435	TRANSLATION	protein_coding	start	-	5	104	2	2.75	0	111.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025481	Urah	ENSMUST00000211372	ENSMUSP00000147522	TRANSLATION	protein_coding	-	CCDS21986.1	2	118	2	3.41	3	132.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025481	Urah	ENSMUST00000026554	ENSMUSP00000026554	TRANSLATION	protein_coding	-	CCDS21986.1	1	118	2	3.41	3	132.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025481	Urah	ENSMUST00000185612	ENSMUSP00000140559	TRANSLATION	protein_coding	-	CCDS21986.1	3	118	2	3.41	3	132.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025481	Urah	ENSMUST00000127986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030972	Acsm5	ENSMUST00000207813	ENSMUSP00000147176	TRANSLATION	protein_coding	-	-	1	273	6	4.26	0	101.8	0	-2,2	-	-	0	MINOR
ENSMUSG00000030972	Acsm5	ENSMUST00000066465	ENSMUSP00000063416	TRANSLATION	protein_coding	-	CCDS40106.1	1	578	28	12.424	2.7	340.1	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000030972	Acsm5	ENSMUST00000207387	ENSMUSP00000146357	TRANSLATION	protein_coding	-	-	1	311	7	4.994	0	115	0	-2,2	-	-	0	MINOR
ENSMUSG00000030972	Acsm5	ENSMUST00000207381	ENSMUSP00000146715	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	0.4	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000030972	Acsm5	ENSMUST00000207307	ENSMUSP00000146737	TRANSLATION	nonsense_mediated_decay	-	-	1	273	6	4.26	0	101.8	0	-2,2	-	-	-1	MINOR
ENSMUSG00000030972	Acsm5	ENSMUST00000207440	ENSMUSP00000146938	TRANSLATION	protein_coding	-	CCDS40106.1	1	578	28	12.424	2.7	340.1	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000030972	Acsm5	ENSMUST00000207796	ENSMUSP00000146520	TRANSLATION	nonsense_mediated_decay	-	-	5	545	27	11.274	0	285.2	0	-2,2	-	-	-1	MINOR
ENSMUSG00000093980	Olfr493	ENSMUST00000080106	ENSMUSP00000079005	TRANSLATION	protein_coding	-	CCDS21712.1	-	314	0	0.32	2.7	182.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049728	Zfp668	ENSMUST00000054415	ENSMUSP00000056105	TRANSLATION	protein_coding	-	CCDS21881.1	1	619	64	1.3	7.5	309.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000049728	Zfp668	ENSMUST00000106263	ENSMUSP00000101870	TRANSLATION	protein_coding	-	CCDS21881.1	1	619	64	1.3	7.5	309.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000049728	Zfp668	ENSMUST00000150961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049728	Zfp668	ENSMUST00000106262	ENSMUSP00000101869	TRANSLATION	protein_coding	-	CCDS21881.1	1	619	64	1.3	7.5	309.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000049728	Zfp668	ENSMUST00000144721	ENSMUSP00000116730	TRANSLATION	protein_coding	stop	-	3	120	10	0.56	0	21.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049728	Zfp668	ENSMUST00000106261	ENSMUSP00000101868	TRANSLATION	protein_coding	-	CCDS21881.1	1	619	64	1.3	7.5	309.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000109824	Olfr643	ENSMUST00000138055	ENSMUSP00000139240	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	46	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000035279	Ssc5d	ENSMUST00000207310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035279	Ssc5d	ENSMUST00000057612	ENSMUSP00000052126	TRANSLATION	protein_coding	-	CCDS20750.1	1	1371	10	3.44	0.5	511.3	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000058966	Fam57b	ENSMUST00000206558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058966	Fam57b	ENSMUST00000205324	ENSMUSP00000145837	TRANSLATION	protein_coding	-	CCDS52400.1	1	275	0	0	5.1	154.9	7	2,-3	-	-	7.97	PRINCIPAL:5
ENSMUSG00000058966	Fam57b	ENSMUST00000205888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058966	Fam57b	ENSMUST00000207020	ENSMUSP00000145721	TRANSLATION	protein_coding	-	CCDS85415.1	1	225	0	0	1.7	143.5	6	-4,-5	-	-	5.628	MINOR
ENSMUSG00000058966	Fam57b	ENSMUST00000079423	ENSMUSP00000078392	TRANSLATION	protein_coding	-	CCDS52401.1	1	275	0	0	3.9	155.4	7	-4,-5	-	-	7.414	ALTERNATIVE:2
ENSMUSG00000058966	Fam57b	ENSMUST00000205722	ENSMUSP00000145881	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	34.1	1	2,-2	-	-	-1	MINOR
ENSMUSG00000058966	Fam57b	ENSMUST00000098032	ENSMUSP00000095640	TRANSLATION	protein_coding	-	CCDS52400.1	5	275	0	0	5.1	154.9	7	2,-3	-	-	7.97	ALTERNATIVE:1
ENSMUSG00000025464	Paox	ENSMUST00000210240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025464	Paox	ENSMUST00000211757	ENSMUSP00000147545	TRANSLATION	protein_coding	stop	-	2	206	9	2	0	85.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025464	Paox	ENSMUST00000209908	ENSMUSP00000147852	TRANSLATION	nonsense_mediated_decay	start	-	2	83	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025464	Paox	ENSMUST00000026537	ENSMUSP00000026537	TRANSLATION	protein_coding	-	CCDS21965.1	1	504	35	7.55	0.5	260.8	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000025464	Paox	ENSMUST00000097967	ENSMUSP00000095580	TRANSLATION	protein_coding	-	CCDS85452.1	1	274	25	5.55	0.5	139.7	0	-1,2	-	-	1.998	MINOR
ENSMUSG00000070844	Vmn2r42	ENSMUST00000086282	ENSMUSP00000083463	TRANSLATION	protein_coding	-	CCDS57483.1	1	852	0	4.21	1.5	389.9	10	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070844	Vmn2r42	ENSMUST00000142934	ENSMUSP00000123451	TRANSLATION	protein_coding	-	-	5	567	0	3.23	0	169.8	0	2,-3	-	-	4.038	MINOR
ENSMUSG00000070844	Vmn2r42	ENSMUST00000233668	ENSMUSP00000156932	TRANSLATION	nonsense_mediated_decay	-	-	-	338	0	0.96	0	82.7	0	2,-3	-	-	-1	MINOR
ENSMUSG00000070844	Vmn2r42	ENSMUST00000136957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070844	Vmn2r42	ENSMUST00000146278	ENSMUSP00000119761	TRANSLATION	protein_coding	-	-	5	802	0	3.61	0.5	377.4	9	2,-3	-	-	10.05	MINOR
ENSMUSG00000108793	Gm45213	ENSMUST00000206065	ENSMUSP00000145765	TRANSLATION	protein_coding,RT	start/stop	-	5	101	0	1	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000054065	Pkp3	ENSMUST00000066873	ENSMUSP00000069961	TRANSLATION	protein_coding	-	CCDS21999.1	1	797	0	6.664	5.1	26.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054065	Pkp3	ENSMUST00000160869	ENSMUSP00000124013	TRANSLATION	nonsense_mediated_decay	-	-	3	87	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054065	Pkp3	ENSMUST00000163041	ENSMUSP00000124434	TRANSLATION	protein_coding	stop	-	2	215	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054065	Pkp3	ENSMUST00000159375	ENSMUSP00000124572	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054065	Pkp3	ENSMUST00000161142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054065	Pkp3	ENSMUST00000159253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054065	Pkp3	ENSMUST00000160403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054065	Pkp3	ENSMUST00000106039	ENSMUSP00000101654	TRANSLATION	protein_coding	-	CCDS52437.1	1	822	0	6.664	1.5	26.2	0	-4,-7	-	-	12.244	MINOR
ENSMUSG00000054065	Pkp3	ENSMUST00000160615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030742	Lat	ENSMUST00000032997	ENSMUSP00000032997	TRANSLATION	protein_coding	-	CCDS21825.1	1	242	0	0	0.5	390.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000030742	Lat	ENSMUST00000205426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030742	Lat	ENSMUST00000205642	ENSMUSP00000146191	TRANSLATION	protein_coding	stop	-	5	105	0	0	0	150.1	0	2,-3	-	-	-1	MINOR
ENSMUSG00000030742	Lat	ENSMUST00000205398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030742	Lat	ENSMUST00000206793	ENSMUSP00000145773	TRANSLATION	protein_coding	-	-	5	232	0	0	0.5	352.8	0	2,-3	-	-	3.72	MINOR
ENSMUSG00000030742	Lat	ENSMUST00000206731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021217	Tshz3	ENSMUST00000021641	ENSMUSP00000021641	TRANSLATION	protein_coding	-	CCDS39913.1	1	1081	8	0	6.2	13.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000021217	Tshz3	ENSMUST00000176413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010755	Cars	ENSMUST00000207168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010755	Cars	ENSMUST00000146462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010755	Cars	ENSMUST00000208575	ENSMUSP00000146835	TRANSLATION	nonsense_mediated_decay	start	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010755	Cars	ENSMUST00000134753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010755	Cars	ENSMUST00000010899	ENSMUSP00000010899	TRANSLATION	protein_coding	-	CCDS40198.1	1	831	26	6.52	6.3	0	0	-4,-5	-	-	14.445	PRINCIPAL:3
ENSMUSG00000010755	Cars	ENSMUST00000146904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010755	Cars	ENSMUST00000135032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010755	Cars	ENSMUST00000151574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010755	Cars	ENSMUST00000105909	ENSMUSP00000101529	TRANSLATION	protein_coding	-	CCDS57597.1	1	748	26	5.72	7.5	0	0	-4,-7	-	-	13.398	ALTERNATIVE:1
ENSMUSG00000010755	Cars	ENSMUST00000154022	ENSMUSP00000146754	TRANSLATION	protein_coding	stop	-	3	53	3	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010755	Cars	ENSMUST00000134128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118215	Vmn1r55	ENSMUST00000098844	ENSMUSP00000096443	TRANSLATION	protein_coding	-	CCDS51983.1	-	310	0	0	0.5	56.1	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000118215	Vmn1r55	ENSMUST00000235878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118215	Vmn1r55	ENSMUST00000235536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118215	Vmn1r55	ENSMUST00000236378	ENSMUSP00000157984	TRANSLATION	protein_coding	-	CCDS51983.1	-	310	0	0	0.5	56.1	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000118215	Vmn1r55	ENSMUST00000235676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118215	Vmn1r55	ENSMUST00000236042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025492	Ifitm3	ENSMUST00000026565	ENSMUSP00000026565	TRANSLATION	protein_coding	-	CCDS21996.1	1	137	0	0	1.5	101.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042759	Apobr	ENSMUST00000137646	ENSMUSP00000145620	TRANSLATION	protein_coding	-	-	2	130	0	0	0	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000042759	Apobr	ENSMUST00000131860	ENSMUSP00000145626	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042759	Apobr	ENSMUST00000138558	ENSMUSP00000146092	TRANSLATION	protein_coding	start	-	3	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042759	Apobr	ENSMUST00000039522	ENSMUSP00000042028	TRANSLATION	protein_coding	-	CCDS21834.1	1	942	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000042759	Apobr	ENSMUST00000144173	ENSMUSP00000145535	TRANSLATION	protein_coding	start	-	2	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000206271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053158	Fes	ENSMUST00000206744	ENSMUSP00000146281	TRANSLATION	nonsense_mediated_decay	-	-	1	177	0	4	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000206002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053158	Fes	ENSMUST00000206698	ENSMUSP00000145937	TRANSLATION	protein_coding	stop	-	3	95	0	2	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000080932	ENSMUSP00000079733	TRANSLATION	protein_coding	-	CCDS39999.1	1	822	18	19.41	7.5	409.7	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000053158	Fes	ENSMUST00000206728	ENSMUSP00000146041	TRANSLATION	protein_coding	-	-	1	820	18	19.41	7.5	409.7	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000053158	Fes	ENSMUST00000205617	ENSMUSP00000145612	TRANSLATION	nonsense_mediated_decay	-	-	1	360	0	7.75	0	28.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000206479	ENSMUSP00000145917	TRANSLATION	nonsense_mediated_decay	-	-	2	173	0	3.5	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000206735	ENSMUSP00000146058	TRANSLATION	protein_coding	start	-	5	75	5	1.83	0	97.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053158	Fes	ENSMUST00000206539	ENSMUSP00000146078	TRANSLATION	nonsense_mediated_decay	start	-	2	41	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040714	Klc3	ENSMUST00000125246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040714	Klc3	ENSMUST00000154419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040714	Klc3	ENSMUST00000108459	ENSMUSP00000104099	TRANSLATION	protein_coding	-	CCDS20901.1	1	508	0	5.75	3.9	135	0	-4,-6	-	-	13.338	MINOR
ENSMUSG00000040714	Klc3	ENSMUST00000047170	ENSMUSP00000038091	TRANSLATION	protein_coding	-	CCDS20901.1	1	508	0	5.75	3.9	135	0	-4,-6	-	-	13.338	MINOR
ENSMUSG00000040714	Klc3	ENSMUST00000108457	ENSMUSP00000104097	TRANSLATION	protein_coding	-	-	5	505	0	5.75	7.5	135	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040714	Klc3	ENSMUST00000108458	ENSMUSP00000104098	TRANSLATION	protein_coding	-	CCDS20901.1	1	508	0	5.75	3.9	135	0	-4,-6	-	-	13.338	MINOR
ENSMUSG00000033847	Pla2g4c	ENSMUST00000167232	ENSMUSP00000127060	TRANSLATION	protein_coding	-	CCDS52027.1	5	607	4	3.32	0.5	91.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000033847	Pla2g4c	ENSMUST00000043612	ENSMUSP00000043672	TRANSLATION	protein_coding	-	CCDS39771.1	1	597	4	3.32	0.5	91.7	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000033847	Pla2g4c	ENSMUST00000108528	ENSMUSP00000104168	TRANSLATION	protein_coding	-	CCDS52027.1	1	607	4	3.32	0.5	91.7	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000033847	Pla2g4c	ENSMUST00000108257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073966	Olfr561	ENSMUST00000098217	ENSMUSP00000095819	TRANSLATION	protein_coding	-	CCDS21547.1	-	314	0	0.3	5.2	405.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073966	Olfr561	ENSMUST00000213432	ENSMUSP00000150963	TRANSLATION	protein_coding	-	CCDS21547.1	5	314	0	0.3	5.2	405.1	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059128	Ifnl2	ENSMUST00000081684	ENSMUSP00000080384	TRANSLATION	protein_coding	-	CCDS39861.1	1	193	0	4.35	0.5	244.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073960	Olfr583	ENSMUST00000098211	ENSMUSP00000095812	TRANSLATION	protein_coding	-	CCDS21559.1	-	319	0	0.36	2.7	355	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041578	Crx	ENSMUST00000174318	ENSMUSP00000134400	TRANSLATION	protein_coding	-	CCDS52035.1	1	323	0	1.83	0.5	133.3	0	-4,-2	-	-	12	MINOR
ENSMUSG00000041578	Crx	ENSMUST00000172758	ENSMUSP00000134463	TRANSLATION	protein_coding	-	-	3	74	0	1	0	33.4	0	-4,-6	-	-	3.282	MINOR
ENSMUSG00000041578	Crx	ENSMUST00000044434	ENSMUSP00000043436	TRANSLATION	protein_coding	-	CCDS20840.1	1	299	0	1.83	7.5	133.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000041578	Crx	ENSMUST00000132563	ENSMUSP00000133833	TRANSLATION	protein_coding	stop	-	2	208	0	1.83	0	78.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041578	Crx	ENSMUST00000174358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066583	Scgb1b27	ENSMUST00000173387	ENSMUSP00000133764	TRANSLATION	protein_coding	-	-	2	90	0	1.198	0	65.2	0	2,-2	-	-	10.74	MINOR
ENSMUSG00000066583	Scgb1b27	ENSMUST00000085618	ENSMUSP00000082758	TRANSLATION	protein_coding	-	CCDS39908.1	1	92	0	1.33	0.5	73.3	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000014686	Ceacam16	ENSMUST00000014830	ENSMUSP00000014830	TRANSLATION	protein_coding	-	CCDS39805.1	1	426	0	3.58	3.9	74	0	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000014686	Ceacam16	ENSMUST00000208198	ENSMUSP00000147247	TRANSLATION	protein_coding	start	-	3	122	0	1.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037519	Ppfia1	ENSMUST00000207298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000182226	ENSMUSP00000138312	TRANSLATION	protein_coding	-	CCDS59738.1	1	1266	0	7.481	5.1	99.4	0	-4,-5	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000037519	Ppfia1	ENSMUST00000183063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037519	Ppfia1	ENSMUST00000207471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000182982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000183197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000183106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000182958	ENSMUSP00000138175	TRANSLATION	nonsense_mediated_decay	start	-	5	562	0	3.55	0	65.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037519	Ppfia1	ENSMUST00000182731	ENSMUSP00000138238	TRANSLATION	nonsense_mediated_decay	start	-	3	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037519	Ppfia1	ENSMUST00000183183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037519	Ppfia1	ENSMUST00000168134	ENSMUSP00000126233	TRANSLATION	protein_coding	-	CCDS52464.1	1	1241	0	7.481	6.3	99.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000066258	Trim12a	ENSMUST00000126145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066258	Trim12a	ENSMUST00000106837	ENSMUSP00000102450	TRANSLATION	protein_coding	-	-	5	265	16	3.13	0.5	74.9	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000066258	Trim12a	ENSMUST00000142641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066258	Trim12a	ENSMUST00000134564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066258	Trim12a	ENSMUST00000070943	ENSMUSP00000065008	TRANSLATION	protein_coding	-	-	1	284	16	2.4	0	74.9	0	-4,-5	-	-	15.342	MINOR
ENSMUSG00000066258	Trim12a	ENSMUST00000106839	ENSMUSP00000102452	TRANSLATION	protein_coding	-	CCDS40067.1	1	297	16	3.73	0.5	74.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091930	Vmn2r52	ENSMUST00000164918	ENSMUSP00000129352	TRANSLATION	protein_coding	-	CCDS52008.1	5	852	3	3.34	0.5	382	8	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000091930	Vmn2r52	ENSMUST00000232927	ENSMUSP00000156503	TRANSLATION	protein_coding	-	-	-	720	2	2.92	0	288.1	5	1,-4	-	-	7.527	MINOR
ENSMUSG00000060240	Cend1	ENSMUST00000084436	ENSMUSP00000081476	TRANSLATION	protein_coding	-	CCDS22012.1	5	149	0	0	1.5	231.3	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060240	Cend1	ENSMUST00000124444	ENSMUSP00000118591	TRANSLATION	protein_coding	-	CCDS22012.1	1	149	0	0	1.5	231.3	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060240	Cend1	ENSMUST00000164387	ENSMUSP00000131085	TRANSLATION	protein_coding	-	CCDS22012.1	1	149	0	0	1.5	231.3	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060240	Cend1	ENSMUST00000137488	ENSMUSP00000123334	TRANSLATION	protein_coding	-	CCDS22012.1	1	149	0	0	1.5	231.3	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000001248	Gramd1a	ENSMUST00000188032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001248	Gramd1a	ENSMUST00000185985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001248	Gramd1a	ENSMUST00000185589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001248	Gramd1a	ENSMUST00000202814	ENSMUSP00000144034	TRANSLATION	protein_coding	start/stop	-	5	255	0	0	0	36.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000187679	ENSMUSP00000140674	TRANSLATION	protein_coding	stop	-	3	161	0	1.65	0	96.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000186634	ENSMUSP00000140195	TRANSLATION	nonsense_mediated_decay	-	-	1	494	0	1.65	0	186.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000206233	ENSMUSP00000146045	TRANSLATION	nonsense_mediated_decay	start	-	5	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000085636	ENSMUSP00000082778	TRANSLATION	protein_coding	-	-	5	688	0	1.65	0	186.1	1	-4,-2	-	-	10.332	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000205298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001248	Gramd1a	ENSMUST00000001280	ENSMUSP00000001280	TRANSLATION	protein_coding	-	CCDS52189.1	1	722	0	1.65	2.7	213.9	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001248	Gramd1a	ENSMUST00000186723	ENSMUSP00000139709	TRANSLATION	protein_coding	stop	-	5	224	0	0.84	0	50.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000206432	ENSMUSP00000146147	TRANSLATION	nonsense_mediated_decay	start	-	3	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000185514	ENSMUSP00000139681	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001248	Gramd1a	ENSMUST00000220635	ENSMUSP00000152547	TRANSLATION	protein_coding	start	-	3	177	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000074227	Spint2	ENSMUST00000098604	ENSMUSP00000096204	TRANSLATION	protein_coding	-	CCDS39870.1	1	252	0	2.18	5.1	126.9	1	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000074227	Spint2	ENSMUST00000208585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074227	Spint2	ENSMUST00000207601	ENSMUSP00000146580	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0.06	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000074227	Spint2	ENSMUST00000108236	ENSMUSP00000103871	TRANSLATION	protein_coding	-	CCDS39869.1	1	195	0	1.18	2.7	61	1	1,-2	-	-	6.122	MINOR
ENSMUSG00000114515	Aldoa	ENSMUST00000207534	ENSMUSP00000147053	TRANSLATION	protein_coding	-	-	5	138	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000114515	Aldoa	ENSMUST00000153686	ENSMUSP00000147238	TRANSLATION	nonsense_mediated_decay	-	-	3	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000107911	ENSMUSP00000103544	TRANSLATION	protein_coding	-	CCDS71947.1	1	443	8	9.31	1.5	188.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000060601	Nr1h2	ENSMUST00000128354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000107910	ENSMUSP00000103543	TRANSLATION	protein_coding	-	CCDS71947.1	1	443	8	9.31	1.5	188.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000060601	Nr1h2	ENSMUST00000208366	ENSMUSP00000146455	TRANSLATION	protein_coding	stop	-	5	161	8	2.86	0	91.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000107912	ENSMUSP00000103545	TRANSLATION	protein_coding	-	CCDS21211.1	1	446	8	9.31	1.5	188.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000060601	Nr1h2	ENSMUST00000142298	ENSMUSP00000147076	TRANSLATION	protein_coding	stop	-	3	22	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000167197	ENSMUSP00000126788	TRANSLATION	protein_coding	-	CCDS21211.1	5	446	8	9.31	1.5	188.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000060601	Nr1h2	ENSMUST00000137674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000208322	ENSMUSP00000146466	TRANSLATION	protein_coding	start	-	5	365	8	7.45	0	183.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000136611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000207737	ENSMUSP00000146601	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000123358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000132769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000209017	ENSMUSP00000146826	TRANSLATION	protein_coding	stop	-	3	111	8	1.95	0	91.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000073488	ENSMUSP00000073188	TRANSLATION	protein_coding	-	CCDS21211.1	1	446	8	9.31	1.5	188.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000060601	Nr1h2	ENSMUST00000207550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060601	Nr1h2	ENSMUST00000128600	ENSMUSP00000146517	TRANSLATION	protein_coding	stop	-	3	57	0	0.86	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060601	Nr1h2	ENSMUST00000141901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097789	Gm2115	ENSMUST00000180387	ENSMUSP00000148068	TRANSLATION	protein_coding	-	-	1	59	0	0	4.8	53.7	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000097789	Gm2115	ENSMUST00000208409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092118	Fancf	ENSMUST00000169357	ENSMUSP00000125812	TRANSLATION	protein_coding	-	CCDS52261.1	-	343	0	0.6	1.5	343.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044814	Olfr543	ENSMUST00000061482	ENSMUSP00000051348	TRANSLATION	protein_coding	-	CCDS21531.1	-	336	0	0.32	0.5	234.3	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044814	Olfr543	ENSMUST00000219647	ENSMUSP00000151487	TRANSLATION	protein_coding	-	CCDS21531.1	5	336	0	0.32	0.5	234.3	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074121	Ntf5	ENSMUST00000210347	ENSMUSP00000148209	TRANSLATION	protein_coding	stop	-	5	54	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000074121	Ntf5	ENSMUST00000058879	ENSMUSP00000057916	TRANSLATION	protein_coding	-	CCDS21241.1	1	209	0	1.4	3.9	154.1	0	2,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000074336	Apoc4	ENSMUST00000209130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074336	Apoc4	ENSMUST00000003071	ENSMUSP00000003071	TRANSLATION	protein_coding	-	CCDS20910.1	1	124	0	0	2.7	175.7	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000058447	Gm26920	ENSMUST00000182746	ENSMUSP00000138567	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	56	0	1	0	83.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025500	Lmntd2	ENSMUST00000026573	ENSMUSP00000026573	TRANSLATION	protein_coding	-	CCDS40181.1	1	664	0	0	1.5	39.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000025500	Lmntd2	ENSMUST00000170841	ENSMUSP00000130905	TRANSLATION	protein_coding	-	-	1	674	0	0	0.5	39.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000034071	Zfp551	ENSMUST00000123877	ENSMUSP00000148021	TRANSLATION	nonsense_mediated_decay	start	-	3	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034071	Zfp551	ENSMUST00000120220	ENSMUSP00000112704	TRANSLATION	protein_coding	-	-	1	56	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000034071	Zfp551	ENSMUST00000080348	ENSMUSP00000079222	TRANSLATION	protein_coding	-	CCDS20809.1	1	696	55	1.4	0.5	367.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000090436	Vmn2r75	ENSMUST00000167830	ENSMUSP00000126973	TRANSLATION	protein_coding	-	CCDS52297.1	5	853	4	2.78	0.5	346.9	0	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000036835	Psenen	ENSMUST00000043898	ENSMUSP00000044682	TRANSLATION	protein_coding	-	CCDS21099.1	1	101	0	3	17.5	135.4	2	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000036835	Psenen	ENSMUST00000207972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036835	Psenen	ENSMUST00000209110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036835	Psenen	ENSMUST00000208628	ENSMUSP00000146469	TRANSLATION	protein_coding	stop	-	2	95	0	3	0	128	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000036835	Psenen	ENSMUST00000207797	ENSMUSP00000147160	TRANSLATION	protein_coding	stop	-	5	41	0	1.5	0	56.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000036835	Psenen	ENSMUST00000207747	ENSMUSP00000146675	TRANSLATION	protein_coding	-	CCDS21099.1	2	101	0	3	17.5	135.4	2	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000036835	Psenen	ENSMUST00000207031	ENSMUSP00000146499	TRANSLATION	protein_coding	-	-	3	66	0	1.75	0	50.5	1	-4,-6	-	-	4.404	MINOR
ENSMUSG00000045733	Sprn	ENSMUST00000059241	ENSMUSP00000053901	TRANSLATION	protein_coding	-	CCDS21966.1	1	147	0	0	1.5	225.4	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000045733	Sprn	ENSMUST00000156791	ENSMUSP00000147870	TRANSLATION	protein_coding	start	-	3	95	0	0	0	148.5	0	-3,1	-	-	-1	MINOR
ENSMUSG00000004371	Il11	ENSMUST00000094892	ENSMUSP00000092492	TRANSLATION	protein_coding	-	CCDS39740.1	1	199	0	3.75	7.5	338.4	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000004371	Il11	ENSMUST00000234277	ENSMUSP00000157240	TRANSLATION	protein_coding	-	CCDS71881.1	-	140	0	2.75	0.5	267.9	0	-4,-5	-	-	5.772	MINOR
ENSMUSG00000004371	Il11	ENSMUST00000163481	ENSMUSP00000131168	TRANSLATION	protein_coding	-	CCDS71881.1	1	140	0	2.75	0.5	267.9	0	-4,-5	-	-	5.772	MINOR
ENSMUSG00000040857	Erf	ENSMUST00000116343	ENSMUSP00000112046	TRANSLATION	protein_coding	-	-	2	149	0	2.25	0	113.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040857	Erf	ENSMUST00000045847	ENSMUSP00000041912	TRANSLATION	protein_coding	-	CCDS20978.1	1	551	0	1.8	1.5	113.7	0	-4,-5	-	-	10.8	MINOR
ENSMUSG00000066516	Klk1b21	ENSMUST00000085455	ENSMUSP00000082582	TRANSLATION	protein_coding	-	CCDS21195.1	1	261	7	4.4	1.5	236.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000009246	Trpm5	ENSMUST00000150867	ENSMUSP00000114302	TRANSLATION	nonsense_mediated_decay	-	-	2	1000	0	0	0.5	34.7	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000009246	Trpm5	ENSMUST00000126776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009246	Trpm5	ENSMUST00000148715	ENSMUSP00000121802	TRANSLATION	protein_coding	start	-	3	190	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009246	Trpm5	ENSMUST00000150589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009246	Trpm5	ENSMUST00000009390	ENSMUSP00000009390	TRANSLATION	protein_coding	-	CCDS52462.1	1	1158	0	0	1.5	40.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000009246	Trpm5	ENSMUST00000136602	ENSMUSP00000122685	TRANSLATION	protein_coding	start	-	5	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009246	Trpm5	ENSMUST00000133027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009246	Trpm5	ENSMUST00000146075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037887	Dusp8	ENSMUST00000143661	ENSMUSP00000114307	TRANSLATION	protein_coding	stop	-	3	231	1	3.8	0	72.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037887	Dusp8	ENSMUST00000039926	ENSMUSP00000049414	TRANSLATION	protein_coding	-	CCDS22024.1	1	663	9	4.8	0.5	185.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000045948	Mrps12	ENSMUST00000171183	ENSMUSP00000132443	TRANSLATION	protein_coding	-	CCDS21052.1	2	139	0	1.83	6.3	90.8	0	-1,0	-	-	14	PRINCIPAL:1
ENSMUSG00000045948	Mrps12	ENSMUST00000165004	ENSMUSP00000129492	TRANSLATION	protein_coding	stop	-	3	125	0	1.198	0	89.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045948	Mrps12	ENSMUST00000056078	ENSMUSP00000062066	TRANSLATION	protein_coding	-	CCDS21052.1	1	139	0	1.83	6.3	90.8	0	-1,0	-	-	14	PRINCIPAL:1
ENSMUSG00000045948	Mrps12	ENSMUST00000165246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040601	Nlrp4a	ENSMUST00000068767	ENSMUSP00000066841	TRANSLATION	protein_coding	-	CCDS21003.1	1	982	8	6.96	1.5	259.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040601	Nlrp4a	ENSMUST00000119386	ENSMUSP00000112441	TRANSLATION	protein_coding	-	CCDS21003.1	1	982	8	6.96	1.5	259.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040601	Nlrp4a	ENSMUST00000146534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040601	Nlrp4a	ENSMUST00000146907	ENSMUSP00000146044	TRANSLATION	protein_coding	-	-	1	952	8	5.96	0.5	259.5	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000044709	Gemin7	ENSMUST00000117222	ENSMUSP00000113266	TRANSLATION	protein_coding	-	CCDS20907.1	2	129	0	2.3	1.5	115	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044709	Gemin7	ENSMUST00000151646	ENSMUSP00000116207	TRANSLATION	protein_coding	stop	-	2	81	0	0.8	0	34.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044709	Gemin7	ENSMUST00000122055	ENSMUSP00000113583	TRANSLATION	protein_coding	-	CCDS20907.1	3	129	0	2.3	1.5	115	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044709	Gemin7	ENSMUST00000119912	ENSMUSP00000112742	TRANSLATION	protein_coding	-	CCDS20907.1	3	129	0	2.3	1.5	115	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044709	Gemin7	ENSMUST00000208826	ENSMUSP00000147112	TRANSLATION	protein_coding	stop	-	3	114	0	1.8	0	85.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044709	Gemin7	ENSMUST00000051364	ENSMUSP00000055844	TRANSLATION	protein_coding	-	CCDS20907.1	1	129	0	2.3	1.5	115	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044709	Gemin7	ENSMUST00000122127	ENSMUSP00000113709	TRANSLATION	protein_coding	-	CCDS20907.1	3	129	0	2.3	1.5	115	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000046750	Selenov	ENSMUST00000056589	ENSMUSP00000050372	TRANSLATION	protein_coding	-	CCDS39855.1	1	328	0	2.048	1.5	45.7	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000046750	Selenov	ENSMUST00000156408	ENSMUSP00000115405	TRANSLATION	protein_coding	start	-	3	46	0	1.35	0	27.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030708	Dnajb13	ENSMUST00000207405	ENSMUSP00000147019	TRANSLATION	protein_coding	-	CCDS21499.1	1	316	0	7.4	10.8	215.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030708	Dnajb13	ENSMUST00000054923	ENSMUSP00000059074	TRANSLATION	protein_coding	start	-	3	256	0	5.4	0	106.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030708	Dnajb13	ENSMUST00000154516	ENSMUSP00000146416	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	2.6	0	80.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030708	Dnajb13	ENSMUST00000130534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034875	Nudt19	ENSMUST00000142930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034875	Nudt19	ENSMUST00000123469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034875	Nudt19	ENSMUST00000040962	ENSMUSP00000047778	TRANSLATION	protein_coding	-	CCDS21152.1	1	357	4	0.3	1.5	0	0	0,4	-	-	10	PRINCIPAL:1
ENSMUSG00000049571	Cfap46	ENSMUST00000138129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049571	Cfap46	ENSMUST00000155075	ENSMUSP00000120463	TRANSLATION	nonsense_mediated_decay	-	-	1	343	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049571	Cfap46	ENSMUST00000166503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049571	Cfap46	ENSMUST00000140820	ENSMUSP00000121085	TRANSLATION	nonsense_mediated_decay	-	-	1	674	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049571	Cfap46	ENSMUST00000156116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049571	Cfap46	ENSMUST00000196540	ENSMUSP00000143590	TRANSLATION	protein_coding	start	-	1	164	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049571	Cfap46	ENSMUST00000129990	ENSMUSP00000120186	TRANSLATION	protein_coding	-	-	5	2641	0	0.6	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000049571	Cfap46	ENSMUST00000130453	ENSMUSP00000115437	TRANSLATION	protein_coding	stop	-	3	226	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049571	Cfap46	ENSMUST00000093991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030606	Hapln3	ENSMUST00000206402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030606	Hapln3	ENSMUST00000205782	ENSMUSP00000145726	TRANSLATION	protein_coding	-	-	5	250	0	2.88	0	152.1	0	4,-1	-	-	5.1	MINOR
ENSMUSG00000030606	Hapln3	ENSMUST00000032827	ENSMUSP00000032827	TRANSLATION	nonsense_mediated_decay	-	-	5	113	0	0.6	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030606	Hapln3	ENSMUST00000206092	ENSMUSP00000146090	TRANSLATION	protein_coding	-	CCDS21378.1	1	359	0	3.33	0.5	272.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030541	Idh2	ENSMUST00000134328	ENSMUSP00000118184	TRANSLATION	nonsense_mediated_decay	-	-	1	294	12	5.86	0	85.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030541	Idh2	ENSMUST00000134070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030541	Idh2	ENSMUST00000206714	ENSMUSP00000146084	TRANSLATION	protein_coding	-	-	3	90	0	2.66	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000030541	Idh2	ENSMUST00000156761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030541	Idh2	ENSMUST00000107384	ENSMUSP00000103007	TRANSLATION	protein_coding	-	CCDS39994.1	1	452	34	11.99	6.3	256.5	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000030541	Idh2	ENSMUST00000125542	ENSMUSP00000145852	TRANSLATION	nonsense_mediated_decay	start	-	3	150	12	3.33	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030541	Idh2	ENSMUST00000139178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035642	Aamdc	ENSMUST00000178078	ENSMUSP00000137067	TRANSLATION	protein_coding	-	CCDS52316.1	2	150	0	3.66	0.5	74.7	0	0,-3	-	-	12	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000154853	ENSMUSP00000115672	TRANSLATION	protein_coding	-	CCDS52316.1	1	150	0	3.66	0.5	74.7	0	0,-3	-	-	12	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000140805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035642	Aamdc	ENSMUST00000124552	ENSMUSP00000120661	TRANSLATION	protein_coding	-	-	3	52	0	1.91	0	40.2	0	-4,-5	-	-	5.73	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000144858	ENSMUSP00000117205	TRANSLATION	protein_coding	-	-	1	68	0	1.58	0	38.4	0	1,-2	-	-	4.926	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000138060	ENSMUSP00000116214	TRANSLATION	protein_coding	-	CCDS52314.1	1	90	0	2.58	0.5	36.1	0	-4,-6	-	-	6.738	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000151840	ENSMUSP00000115852	TRANSLATION	protein_coding	stop	-	5	81	0	1.33	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000135998	ENSMUSP00000118391	TRANSLATION	protein_coding	stop	-	5	128	0	2.91	0	52	0	0,-3	-	-	-1	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000136757	ENSMUSP00000121940	TRANSLATION	protein_coding	-	CCDS21461.1	2	122	0	3.66	17.3	74.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000035642	Aamdc	ENSMUST00000154779	ENSMUSP00000120195	TRANSLATION	nonsense_mediated_decay	-	-	2	61	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000205430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035642	Aamdc	ENSMUST00000126085	ENSMUSP00000120089	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000042627	ENSMUSP00000035883	TRANSLATION	protein_coding	-	CCDS52315.1	3	118	0	2.58	0.5	36.1	0	0,-3	-	-	6.738	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000072725	ENSMUSP00000072508	TRANSLATION	protein_coding	-	CCDS52315.1	1	118	0	2.58	0.5	36.1	0	0,-3	-	-	6.738	MINOR
ENSMUSG00000035642	Aamdc	ENSMUST00000146605	ENSMUSP00000117571	TRANSLATION	protein_coding	-	-	3	139	0	3.66	0	74.7	0	-4,-2	-	-	12	MINOR
ENSMUSG00000072244	Trim6	ENSMUST00000144538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072244	Trim6	ENSMUST00000153324	ENSMUSP00000119932	TRANSLATION	protein_coding	stop	-	3	148	16	2.948	0	128.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072244	Trim6	ENSMUST00000098180	ENSMUSP00000095782	TRANSLATION	protein_coding	-	CCDS40065.1	1	488	16	7.058	1.5	195.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072244	Trim6	ENSMUST00000214578	ENSMUSP00000149805	TRANSLATION	protein_coding	-	-	5	462	12	6.308	0	156.2	0	-4,-5	-	-	11.46	MINOR
ENSMUSG00000072244	Trim6	ENSMUST00000128493	ENSMUSP00000118859	TRANSLATION	protein_coding	stop	-	3	125	14	2.25	0	120.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072244	Trim6	ENSMUST00000144455	ENSMUSP00000116233	TRANSLATION	protein_coding	stop	-	3	113	11	1.75	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091651	Vmn2r36	ENSMUST00000170402	ENSMUSP00000132457	TRANSLATION	protein_coding	-	CCDS57481.1	5	852	0	2.8	1.5	393.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000078815	Cacng6	ENSMUST00000108647	ENSMUSP00000104287	TRANSLATION	protein_coding	-	-	5	214	0	1.79	3.9	39.8	2	-4,-1	-	-	7.774	MINOR
ENSMUSG00000078815	Cacng6	ENSMUST00000183200	ENSMUSP00000138622	TRANSLATION	protein_coding	-	CCDS39726.1	1	260	0	2.39	3.9	101.8	4	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000031085	Acte1	ENSMUST00000207630	ENSMUSP00000146335	TRANSLATION	protein_coding	-	-	5	370	24	7.31	0	287.1	0	-4,-5	-	-	12.366	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000207235	ENSMUSP00000146511	TRANSLATION	nonsense_mediated_decay	-	-	5	128	6	3	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000179036	ENSMUSP00000137404	TRANSLATION	protein_coding	start/stop	-	5	330	20	7.13	0	282.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000207642	ENSMUSP00000146435	TRANSLATION	nonsense_mediated_decay	-	-	5	46	6	1	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000208153	ENSMUSP00000147148	TRANSLATION	nonsense_mediated_decay	-	-	5	128	6	3	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000208761	ENSMUSP00000146470	TRANSLATION	nonsense_mediated_decay	-	-	5	147	9	3.18	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000208457	ENSMUSP00000147033	TRANSLATION	nonsense_mediated_decay	-	-	5	128	6	3	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000208038	ENSMUSP00000146459	TRANSLATION	nonsense_mediated_decay	-	-	5	150	9	3	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000208625	ENSMUSP00000146995	TRANSLATION	nonsense_mediated_decay	-	-	5	46	6	1	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000207482	ENSMUSP00000146606	TRANSLATION	nonsense_mediated_decay	-	-	5	159	6	3.18	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000207388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031085	Acte1	ENSMUST00000134455	ENSMUSP00000146764	TRANSLATION	nonsense_mediated_decay	-	-	5	89	6	2	0	63.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031085	Acte1	ENSMUST00000152910	ENSMUSP00000115809	TRANSLATION	protein_coding	-	-	5	372	25	8.13	0.5	342.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023118	Sympk	ENSMUST00000023882	ENSMUSP00000023882	TRANSLATION	protein_coding	-	CCDS52051.1	1	1288	5	8.75	0.5	443	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000023118	Sympk	ENSMUST00000153976	ENSMUSP00000121540	TRANSLATION	protein_coding	stop	-	5	198	5	5	0	59.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023118	Sympk	ENSMUST00000138440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023118	Sympk	ENSMUST00000148861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023118	Sympk	ENSMUST00000137287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023118	Sympk	ENSMUST00000146903	ENSMUSP00000138740	TRANSLATION	nonsense_mediated_decay	-	-	1	234	5	5.75	0	86.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023118	Sympk	ENSMUST00000131230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023118	Sympk	ENSMUST00000130328	ENSMUSP00000115900	TRANSLATION	protein_coding	start	-	3	143	0	0	0	139	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070705	Eid2b	ENSMUST00000094651	ENSMUSP00000092235	TRANSLATION	protein_coding	-	CCDS52161.1	-	151	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073982	Rhog	ENSMUST00000098230	ENSMUSP00000095832	TRANSLATION	protein_coding	-	CCDS21529.1	1	191	24	2	19.5	193.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000073982	Rhog	ENSMUST00000209968	ENSMUSP00000147985	TRANSLATION	protein_coding	stop	-	3	83	13	1	0	109.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073982	Rhog	ENSMUST00000106923	ENSMUSP00000102536	TRANSLATION	protein_coding	-	CCDS21529.1	5	191	24	2	19.5	193.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000092225	Gm2381	ENSMUST00000174558	ENSMUSP00000133949	TRANSLATION	protein_coding	-	-	1	305	28	2.05	0	145.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030754	Copb1	ENSMUST00000033012	ENSMUSP00000033012	TRANSLATION	protein_coding	-	CCDS21759.1	1	953	0	20.5	19.5	413.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030754	Copb1	ENSMUST00000211417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030754	Copb1	ENSMUST00000209394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090715	Vmn1r167	ENSMUST00000164527	ENSMUSP00000129193	TRANSLATION	protein_coding	-	CCDS52130.1	-	315	0	0	0.5	61.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000090715	Vmn1r167	ENSMUST00000227713	ENSMUSP00000153774	TRANSLATION	protein_coding	-	CCDS52130.1	-	315	0	0	0.5	61.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052997	Uba2	ENSMUST00000139916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052997	Uba2	ENSMUST00000175991	ENSMUSP00000135885	TRANSLATION	nonsense_mediated_decay	start	-	3	148	2	3.75	0	45.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052997	Uba2	ENSMUST00000156253	ENSMUSP00000116605	TRANSLATION	protein_coding	stop	-	3	119	16	3.3	0	116.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052997	Uba2	ENSMUST00000152037	ENSMUSP00000135078	TRANSLATION	protein_coding	start	-	1	69	0	1.75	0	40.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052997	Uba2	ENSMUST00000134856	ENSMUSP00000135841	TRANSLATION	nonsense_mediated_decay	start	-	5	132	11	4	0	85.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052997	Uba2	ENSMUST00000142763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052997	Uba2	ENSMUST00000102746	ENSMUSP00000099807	TRANSLATION	protein_coding	-	CCDS21136.1	1	638	24	16.8	1.5	425.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000052997	Uba2	ENSMUST00000206651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052997	Uba2	ENSMUST00000124824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052997	Uba2	ENSMUST00000205711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102627	Snurf	ENSMUST00000194059	ENSMUSP00000141531	TRANSLATION	protein_coding	-	CCDS57553.1	2	71	2	0	7.5	156.1	0	-4,-2	-	-	11	PRINCIPAL:1
ENSMUSG00000062987	Olfr715b	ENSMUST00000215713	ENSMUSP00000149136	TRANSLATION	protein_coding	-	CCDS52353.1	5	315	0	0.24	5.1	189.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000062987	Olfr715b	ENSMUST00000081044	ENSMUSP00000079834	TRANSLATION	protein_coding	-	CCDS52353.1	-	315	0	0.24	5.1	189.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030793	Pycard	ENSMUST00000205594	ENSMUSP00000146211	TRANSLATION	protein_coding	start	-	5	151	0	2.5	0	107.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030793	Pycard	ENSMUST00000033056	ENSMUSP00000033056	TRANSLATION	protein_coding	-	CCDS21888.1	1	193	0	3.5	3.9	147.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000039236	Isg20	ENSMUST00000121645	ENSMUSP00000112621	TRANSLATION	protein_coding	-	CCDS71982.1	1	300	7	2.14	0.5	46.5	0	-4,-5	-	-	13.458	MINOR
ENSMUSG00000039236	Isg20	ENSMUST00000133042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039236	Isg20	ENSMUST00000120331	ENSMUSP00000113255	TRANSLATION	protein_coding	-	CCDS21376.1	1	181	9	3	3.9	61.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039236	Isg20	ENSMUST00000118867	ENSMUSP00000112480	TRANSLATION	protein_coding	-	CCDS21376.1	3	181	9	3	3.9	61.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039236	Isg20	ENSMUST00000038142	ENSMUSP00000040080	TRANSLATION	protein_coding	-	CCDS21376.1	1	181	9	3	3.9	61.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039236	Isg20	ENSMUST00000205981	ENSMUSP00000145840	TRANSLATION	protein_coding	-	-	3	145	7	2	0	46.5	0	-4,-5	-	-	13.182	MINOR
ENSMUSG00000058230	Arhgap35	ENSMUST00000171937	ENSMUSP00000127379	TRANSLATION	protein_coding	-	CCDS20851.1	5	1499	17	5.15	7.5	322.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000058230	Arhgap35	ENSMUST00000075845	ENSMUSP00000075242	TRANSLATION	protein_coding	-	CCDS20851.1	1	1499	17	5.15	7.5	322.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000107950	ENSMUSP00000103584	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000138978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000185481	ENSMUSP00000139913	TRANSLATION	protein_coding	stop	-	5	101	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000137702	ENSMUSP00000119445	TRANSLATION	protein_coding	stop	-	5	156	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000071296	ENSMUSP00000071265	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000187581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000146155	ENSMUSP00000117318	TRANSLATION	protein_coding	stop	-	3	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000107949	ENSMUSP00000103582	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000107948	ENSMUSP00000103581	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000084937	ENSMUSP00000095894	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000136210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000188382	ENSMUSP00000140200	TRANSLATION	protein_coding	-	CCDS52228.1	5	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000055858	ENSMUSP00000103583	TRANSLATION	protein_coding	-	CCDS52228.1	1	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000188476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000145653	ENSMUSP00000116980	TRANSLATION	protein_coding	stop	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000186606	ENSMUSP00000139441	TRANSLATION	protein_coding	-	-	5	167	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000191537	ENSMUSP00000141077	TRANSLATION	protein_coding	-	-	5	167	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000188111	ENSMUSP00000139694	TRANSLATION	protein_coding	-	CCDS52228.1	2	284	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000144905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045411	2410002F23Rik	ENSMUST00000187524	ENSMUSP00000140017	TRANSLATION	protein_coding	stop	-	5	94	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060397	Zfp128	ENSMUST00000081891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060397	Zfp128	ENSMUST00000144578	ENSMUSP00000115378	TRANSLATION	protein_coding	-	CCDS20815.1	1	572	28	1.6	1.5	257.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046924	Vmn1r179	ENSMUST00000236851	ENSMUSP00000157551	TRANSLATION	nonsense_mediated_decay	-	-	-	323	0	0	0.5	50.6	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000046924	Vmn1r179	ENSMUST00000049819	ENSMUSP00000055372	TRANSLATION	protein_coding	-	CCDS20936.1	-	323	0	0	0.5	50.6	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066189	Cacng3	ENSMUST00000182563	ENSMUSP00000138495	TRANSLATION	protein_coding	stop	-	5	127	0	1.375	0	77.4	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000066189	Cacng3	ENSMUST00000182095	ENSMUSP00000138755	TRANSLATION	protein_coding	stop	-	5	186	0	3.6	0	130.8	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000066189	Cacng3	ENSMUST00000084615	ENSMUSP00000081664	TRANSLATION	protein_coding	-	CCDS21816.1	1	315	0	5.15	13	170.8	3	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030934	Oat	ENSMUST00000084500	ENSMUSP00000081544	TRANSLATION	protein_coding	-	CCDS21923.1	1	439	13	10	14.8	401	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000030934	Oat	ENSMUST00000211545	ENSMUSP00000147794	TRANSLATION	protein_coding	stop	-	2	30	0	1	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000118553	Gm38999	ENSMUST00000239023	ENSMUSP00000159166	TRANSLATION	protein_coding	-	-	-	185	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000130220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038695	Josd2	ENSMUST00000136679	ENSMUSP00000114900	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0.8	0	31.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000131817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038695	Josd2	ENSMUST00000208117	ENSMUSP00000146846	TRANSLATION	protein_coding	stop	-	3	67	0	0.9	0	33.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000136609	ENSMUSP00000123205	TRANSLATION	nonsense_mediated_decay	-	-	3	97	0	1.25	0	42.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000206210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038695	Josd2	ENSMUST00000133656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038695	Josd2	ENSMUST00000149341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038695	Josd2	ENSMUST00000134398	ENSMUSP00000145857	TRANSLATION	protein_coding	-	-	5	81	0	1.2	0	30.3	0	-4,-7	-	-	5.874	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000206887	ENSMUSP00000145582	TRANSLATION	protein_coding	-	-	5	123	0	1.65	0	41.8	0	-4,-6	-	-	8.082	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000132952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038695	Josd2	ENSMUST00000117324	ENSMUSP00000113313	TRANSLATION	protein_coding	-	CCDS21208.1	1	188	0	1.89	7.5	88.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000035844	ENSMUSP00000048415	TRANSLATION	protein_coding	-	CCDS21208.1	1	188	0	1.89	7.5	88.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000118628	ENSMUSP00000113172	TRANSLATION	protein_coding	-	CCDS21208.1	2	188	0	1.89	7.5	88.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000121922	ENSMUSP00000112796	TRANSLATION	protein_coding	-	-	5	146	0	1.44	2.4	67.7	0	-4,-7	-	-	9.825	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000139097	ENSMUSP00000147171	TRANSLATION	nonsense_mediated_decay	start	-	3	97	0	1.25	0	42.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038695	Josd2	ENSMUST00000118493	ENSMUSP00000113226	TRANSLATION	protein_coding	-	CCDS21208.1	5	188	0	1.89	7.5	88.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000120852	ENSMUSP00000114105	TRANSLATION	protein_coding	-	CCDS21208.1	3	188	0	1.89	7.5	88.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038695	Josd2	ENSMUST00000155659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003873	Bax	ENSMUST00000211365	ENSMUSP00000148240	TRANSLATION	protein_coding	-	-	3	171	0	4.87	0.5	95.8	0	-4,-5	-	-	10.422	MINOR
ENSMUSG00000003873	Bax	ENSMUST00000210019	ENSMUSP00000147753	TRANSLATION	protein_coding	start/stop	-	5	114	0	2.41	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003873	Bax	ENSMUST00000211615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003873	Bax	ENSMUST00000033093	ENSMUSP00000033093	TRANSLATION	protein_coding	-	CCDS21246.1	1	192	0	5.66	7.5	95.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000003873	Bax	ENSMUST00000211195	ENSMUSP00000148182	TRANSLATION	protein_coding	stop	-	5	74	0	2.66	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003873	Bax	ENSMUST00000210392	ENSMUSP00000148265	TRANSLATION	protein_coding	stop	-	2	172	0	4.83	1.2	95.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000139766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030720	Cln3	ENSMUST00000134406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030720	Cln3	ENSMUST00000134246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030720	Cln3	ENSMUST00000125508	ENSMUSP00000117561	TRANSLATION	protein_coding	stop	-	5	151	0	0	0	146	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000128225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030720	Cln3	ENSMUST00000147086	ENSMUSP00000114555	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000084589	ENSMUSP00000081636	TRANSLATION	protein_coding	-	CCDS21833.1	1	438	0	0	1.5	458.8	17	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000030720	Cln3	ENSMUST00000153790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030720	Cln3	ENSMUST00000150917	ENSMUSP00000138688	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	47.3	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000138285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030720	Cln3	ENSMUST00000128049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030720	Cln3	ENSMUST00000150311	ENSMUSP00000116160	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	46.4	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000124177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030720	Cln3	ENSMUST00000032962	ENSMUSP00000032962	TRANSLATION	protein_coding	-	CCDS21833.1	1	438	0	0	1.5	458.8	17	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000030720	Cln3	ENSMUST00000128970	ENSMUSP00000114901	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	189.1	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000116269	ENSMUSP00000111973	TRANSLATION	protein_coding	-	CCDS21833.1	5	438	0	0	1.5	458.8	17	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000030720	Cln3	ENSMUST00000134498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030720	Cln3	ENSMUST00000150587	ENSMUSP00000118054	TRANSLATION	protein_coding	stop	-	2	70	0	0	0	47.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000030720	Cln3	ENSMUST00000098036	ENSMUSP00000095644	TRANSLATION	protein_coding	-	-	1	414	0	0	0	449.7	17	-4,-6	-	-	5.454	ALTERNATIVE:2
ENSMUSG00000073956	Olfr592	ENSMUST00000098207	ENSMUSP00000095808	TRANSLATION	protein_coding	-	CCDS21564.1	-	312	0	0.36	7.6	369.9	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000073956	Olfr592	ENSMUST00000106893	ENSMUSP00000102506	TRANSLATION	protein_coding	-	CCDS21564.1	5	312	0	0.36	7.6	369.9	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000073956	Olfr592	ENSMUST00000218618	ENSMUSP00000153755	TRANSLATION	protein_coding	-	-	5	323	0	0.36	0	369.9	8	-4,-7	-	-	12	MINOR
ENSMUSG00000059824	Dbp	ENSMUST00000080885	ENSMUSP00000079693	TRANSLATION	protein_coding	-	CCDS21260.1	1	325	0	0	7.5	59.7	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000059824	Dbp	ENSMUST00000211357	ENSMUSP00000147355	TRANSLATION	protein_coding	-	-	5	225	0	0	1	59.7	0	-4,-7	-	-	6	MINOR
ENSMUSG00000059824	Dbp	ENSMUST00000211513	ENSMUSP00000147790	TRANSLATION	protein_coding	-	-	5	188	0	0	1.5	59.7	0	-4,-7	-	-	6.231	MINOR
ENSMUSG00000059824	Dbp	ENSMUST00000211748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059824	Dbp	ENSMUST00000210120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051041	Olfml1	ENSMUST00000120990	ENSMUSP00000114029	TRANSLATION	protein_coding	-	CCDS52354.1	1	233	0	0.94	0.5	60	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000051041	Olfml1	ENSMUST00000239087	ENSMUSP00000159031	TRANSLATION	protein_coding	-	-	-	232	0	0.58	0	35.2	0	3,-1	-	-	7.224	MINOR
ENSMUSG00000070421	Olfr658	ENSMUST00000210641	ENSMUSP00000147498	TRANSLATION	protein_coding	-	-	1	321	0	0.42	8.8	360.6	7	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000070421	Olfr658	ENSMUST00000089296	ENSMUSP00000086711	TRANSLATION	protein_coding	-	CCDS21624.1	1	323	0	0.42	8.8	360.6	7	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000030557	Mef2a	ENSMUST00000076325	ENSMUSP00000075664	TRANSLATION	protein_coding	-	CCDS71979.1	1	492	0	1.9	7.9	74.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030557	Mef2a	ENSMUST00000133074	ENSMUSP00000116144	TRANSLATION	protein_coding	stop	-	1	235	0	1.5	0	28.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030557	Mef2a	ENSMUST00000135493	ENSMUSP00000138566	TRANSLATION	nonsense_mediated_decay	-	-	1	498	0	1.5	3.7	28.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030557	Mef2a	ENSMUST00000207486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030557	Mef2a	ENSMUST00000144057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030557	Mef2a	ENSMUST00000072460	ENSMUSP00000138645	TRANSLATION	nonsense_mediated_decay	-	-	1	100	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030557	Mef2a	ENSMUST00000207715	ENSMUSP00000146872	TRANSLATION	protein_coding	start/stop	-	5	210	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030557	Mef2a	ENSMUST00000107476	ENSMUSP00000103100	TRANSLATION	protein_coding	-	CCDS71980.1	1	490	0	1.5	4.7	28.3	0	-4,-6	-	-	8.628	MINOR
ENSMUSG00000030557	Mef2a	ENSMUST00000032776	ENSMUSP00000032776	TRANSLATION	protein_coding	-	CCDS71979.1	1	492	0	1.9	7.9	74.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030557	Mef2a	ENSMUST00000208823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030557	Mef2a	ENSMUST00000207794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030557	Mef2a	ENSMUST00000156690	ENSMUSP00000117496	TRANSLATION	protein_coding	-	CCDS39981.1	1	498	0	1.5	3.7	28.3	0	-4,-6	-	-	8.193	MINOR
ENSMUSG00000001918	Slc1a5	ENSMUST00000135817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001918	Slc1a5	ENSMUST00000131664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001918	Slc1a5	ENSMUST00000134407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001918	Slc1a5	ENSMUST00000147814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001918	Slc1a5	ENSMUST00000108496	ENSMUSP00000104136	TRANSLATION	protein_coding	-	CCDS39785.1	1	555	0	5.18	0.5	400.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001918	Slc1a5	ENSMUST00000127401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001918	Slc1a5	ENSMUST00000141349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001918	Slc1a5	ENSMUST00000206444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025478	Dpysl4	ENSMUST00000145499	ENSMUSP00000117764	TRANSLATION	protein_coding	stop	-	5	156	3	4	0	54.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025478	Dpysl4	ENSMUST00000026551	ENSMUSP00000026551	TRANSLATION	protein_coding	-	CCDS21951.1	1	572	3	13.13	11	133.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025478	Dpysl4	ENSMUST00000122844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025478	Dpysl4	ENSMUST00000154273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025478	Dpysl4	ENSMUST00000139364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025478	Dpysl4	ENSMUST00000121184	ENSMUSP00000112896	TRANSLATION	protein_coding	-	-	1	593	3	12.63	0	133.4	0	-4,-2	-	-	13.998	MINOR
ENSMUSG00000030804	Gm21974	ENSMUST00000126662	ENSMUSP00000123566	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	119	0	0	0	66.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000063230	Olfr535	ENSMUST00000217580	ENSMUSP00000149412	TRANSLATION	nonsense_mediated_decay	-	-	5	312	0	0.2	1.5	169	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000063230	Olfr535	ENSMUST00000213715	ENSMUSP00000149468	TRANSLATION	protein_coding	-	CCDS21978.1	5	312	0	0.2	1.5	169	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063230	Olfr535	ENSMUST00000217235	ENSMUSP00000149340	TRANSLATION	protein_coding	-	CCDS21978.1	5	312	0	0.2	1.5	169	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063230	Olfr535	ENSMUST00000216962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063230	Olfr535	ENSMUST00000074897	ENSMUSP00000074435	TRANSLATION	protein_coding	-	CCDS21978.1	-	312	0	0.2	1.5	169	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063230	Olfr535	ENSMUST00000214296	ENSMUSP00000149320	TRANSLATION	protein_coding	-	CCDS21978.1	5	312	0	0.2	1.5	169	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063230	Olfr535	ENSMUST00000216585	ENSMUSP00000150897	TRANSLATION	nonsense_mediated_decay	-	-	5	312	0	0.2	1.5	169	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000063230	Olfr535	ENSMUST00000213339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004610	Etfb	ENSMUST00000206411	ENSMUSP00000145650	TRANSLATION	protein_coding	start	-	5	213	20	5.75	0	152.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004610	Etfb	ENSMUST00000206196	ENSMUSP00000145672	TRANSLATION	protein_coding	stop	-	2	177	19	5	0	131.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004610	Etfb	ENSMUST00000205363	ENSMUSP00000146325	TRANSLATION	protein_coding	start	-	3	100	9	3.33	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004610	Etfb	ENSMUST00000143096	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004610	Etfb	ENSMUST00000004729	ENSMUSP00000004729	TRANSLATION	protein_coding	-	CCDS21171.1	1	255	20	7.58	7.5	165.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000004610	Etfb	ENSMUST00000206286	ENSMUSP00000145608	TRANSLATION	protein_coding	stop	-	5	177	17	5	0	101.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004610	Etfb	ENSMUST00000155468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073979	Olfr547	ENSMUST00000098229	ENSMUSP00000095831	TRANSLATION	protein_coding	-	CCDS40050.1	-	311	0	0.24	6.3	349.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040866	Rsph6a	ENSMUST00000076887	ENSMUSP00000076153	TRANSLATION	protein_coding	-	CCDS52052.1	1	453	0	0	0.5	241.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000040866	Rsph6a	ENSMUST00000144991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040866	Rsph6a	ENSMUST00000035521	ENSMUSP00000046526	TRANSLATION	protein_coding	-	CCDS20887.1	1	708	0	0	0.5	658.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043262	Uevld	ENSMUST00000094398	ENSMUSP00000091964	TRANSLATION	protein_coding	-	CCDS39965.1	1	471	24	10.91	6.3	249.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043262	Uevld	ENSMUST00000208388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043262	Uevld	ENSMUST00000208308	ENSMUSP00000146385	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.85	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043262	Uevld	ENSMUST00000207738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043262	Uevld	ENSMUST00000210227	ENSMUSP00000147932	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	1.6	0	37.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043262	Uevld	ENSMUST00000207986	ENSMUSP00000146930	TRANSLATION	nonsense_mediated_decay	-	-	1	250	9	5.462	0	170.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019429	Ffar3	ENSMUST00000094583	ENSMUSP00000092163	TRANSLATION	protein_coding	-	CCDS21112.1	1	319	0	0.48	1.5	107.6	6	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000019429	Ffar3	ENSMUST00000185748	ENSMUSP00000140252	TRANSLATION	protein_coding	-	CCDS21112.1	-	319	0	0.48	1.5	107.6	6	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000110324	Gm40460	ENSMUST00000211591	ENSMUSP00000147331	TRANSLATION	protein_coding	-	-	-	244	0	0	0.5	37.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030786	Itgam	ENSMUST00000064821	ENSMUSP00000068468	TRANSLATION	protein_coding	-	CCDS40149.1	5	1154	31	24.12	0.5	339.3	1	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000030786	Itgam	ENSMUST00000156593	ENSMUSP00000121676	TRANSLATION	nonsense_mediated_decay	-	-	3	94	0	2.0198	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030786	Itgam	ENSMUST00000119696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030786	Itgam	ENSMUST00000120355	ENSMUSP00000113957	TRANSLATION	protein_coding	-	-	5	1167	31	24.12	0	316.5	1	4,-1	-	-	16.632	MINOR
ENSMUSG00000030786	Itgam	ENSMUST00000106242	ENSMUSP00000101849	TRANSLATION	protein_coding	-	CCDS21889.1	1	1153	31	24.12	0.5	339.3	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000030786	Itgam	ENSMUST00000106240	ENSMUSP00000101847	TRANSLATION	protein_coding	-	-	1	1036	14	22.12	0	303.8	1	4,-1	-	-	5.868	MINOR
ENSMUSG00000066306	Numa1	ENSMUST00000084852	ENSMUSP00000081912	TRANSLATION	protein_coding	-	CCDS40046.1	1	2094	0	1.03	0.5	0	0	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000066306	Numa1	ENSMUST00000210679	ENSMUSP00000147935	TRANSLATION	protein_coding	stop	-	3	218	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000066306	Numa1	ENSMUST00000209639	ENSMUSP00000148215	TRANSLATION	protein_coding	stop	-	1	875	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000066306	Numa1	ENSMUST00000163183	ENSMUSP00000126180	TRANSLATION	protein_coding	start	-	1	741	0	1.03	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066306	Numa1	ENSMUST00000210475	ENSMUSP00000148098	TRANSLATION	protein_coding	stop	-	1	1082	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000066306	Numa1	ENSMUST00000210353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066306	Numa1	ENSMUST00000209583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066306	Numa1	ENSMUST00000211272	ENSMUSP00000148187	TRANSLATION	protein_coding	stop	-	5	207	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000059136	Olfr539	ENSMUST00000219579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059136	Olfr539	ENSMUST00000218865	ENSMUSP00000151522	TRANSLATION	protein_coding	-	-	5	312	0	0.2	1.5	168.7	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000059136	Olfr539	ENSMUST00000219853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059136	Olfr539	ENSMUST00000078967	ENSMUSP00000077990	TRANSLATION	protein_coding	-	CCDS21982.1	-	319	0	0.2	0.5	168.7	7	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030587	2200002D01Rik	ENSMUST00000151339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030587	2200002D01Rik	ENSMUST00000032808	ENSMUSP00000032808	TRANSLATION	protein_coding	-	CCDS52172.1	1	114	0	0	0.5	123	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055633	Zfp580	ENSMUST00000208570	ENSMUSP00000147223	TRANSLATION	protein_coding	-	-	1	230	12	0.6	0	46.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000055633	Zfp580	ENSMUST00000069324	ENSMUSP00000065861	TRANSLATION	protein_coding	-	CCDS51982.1	1	172	12	0.6	1.5	46.9	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000061549	Olfr301	ENSMUST00000174362	ENSMUSP00000133780	TRANSLATION	protein_coding	-	CCDS57560.1	3	311	0	0.2	1.8	154.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094298	Vmn1r241	ENSMUST00000169774	ENSMUSP00000130340	TRANSLATION	protein_coding	-	CCDS52070.1	-	307	0	0	1.5	59.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051051	Olfr523	ENSMUST00000216023	ENSMUSP00000149562	TRANSLATION	protein_coding	-	-	5	311	0	0.36	1	170.6	8	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051051	Olfr523	ENSMUST00000209314	ENSMUSP00000148025	TRANSLATION	protein_coding	-	-	5	311	0	0.36	1	170.6	8	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051051	Olfr523	ENSMUST00000215785	ENSMUSP00000149490	TRANSLATION	protein_coding	-	-	5	311	0	0.36	1	170.6	8	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051051	Olfr523	ENSMUST00000214272	ENSMUSP00000150614	TRANSLATION	protein_coding	-	-	5	311	0	0.36	1	170.6	8	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051051	Olfr523	ENSMUST00000055890	ENSMUSP00000052678	TRANSLATION	protein_coding	-	CCDS21968.1	-	317	0	0.36	0.5	170.6	8	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000051051	Olfr523	ENSMUST00000213953	ENSMUSP00000149510	TRANSLATION	protein_coding	-	-	5	311	0	0.36	1	170.6	8	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000060565	Gm5591	ENSMUST00000079759	ENSMUSP00000078695	TRANSLATION	protein_coding	-	CCDS52205.1	1	855	0	0	0.5	190.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030653	Gm45837	ENSMUST00000084894	ENSMUSP00000081956	TRANSLATION	protein_coding,RT	-	-	5	961	15	19.5	0	345.7	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000037060	Cavin3	ENSMUST00000047040	ENSMUSP00000044979	TRANSLATION	protein_coding	-	CCDS21652.1	1	260	0	0.6	1.5	134.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000118560	Lim2	ENSMUST00000004732	ENSMUSP00000004732	TRANSLATION	protein_coding	-	CCDS21168.1	1	173	0	0	12.3	140.9	0	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000057093	Zfp607b	ENSMUST00000120004	ENSMUSP00000112494	TRANSLATION	protein_coding	-	CCDS21029.1	1	648	68	1.4	0.5	375.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000057093	Zfp607b	ENSMUST00000127200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057093	Zfp607b	ENSMUST00000124397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057093	Zfp607b	ENSMUST00000076421	ENSMUSP00000075755	TRANSLATION	protein_coding	-	CCDS21029.1	5	648	68	1.4	0.5	375.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049791	Fzd4	ENSMUST00000058755	ENSMUSP00000049852	TRANSLATION	protein_coding	-	CCDS21441.1	1	537	0	1.42	6.3	521.9	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000093877	Olfr1348	ENSMUST00000209097	ENSMUSP00000147205	TRANSLATION	protein_coding	stop	-	2	137	0	2.026	0	76.4	11	-4,-7	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000209029	ENSMUSP00000146802	TRANSLATION	protein_coding	-	CCDS85210.1	5	312	0	2.026	5.1	167.1	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000093877	Olfr1348	ENSMUST00000208207	ENSMUSP00000146873	TRANSLATION	protein_coding	stop	-	2	99	0	1.026	0	35.8	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000208623	ENSMUSP00000146811	TRANSLATION	protein_coding	stop	-	5	62	0	0	0	0	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000207055	ENSMUSP00000146621	TRANSLATION	protein_coding	stop	-	3	90	0	0.96	0	33.3	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000086319	ENSMUSP00000083499	TRANSLATION	protein_coding	start	-	5	318	0	2.026	0.5	167.1	14	-4,-1	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000213549	ENSMUSP00000150128	TRANSLATION	protein_coding	-	CCDS85210.1	5	312	0	2.026	5.1	167.1	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000093877	Olfr1348	ENSMUST00000207624	ENSMUSP00000146853	TRANSLATION	protein_coding	stop	-	3	132	0	1.826	0	67.5	11	-4,-7	-	-	-1	MINOR
ENSMUSG00000093877	Olfr1348	ENSMUST00000208066	ENSMUSP00000146558	TRANSLATION	protein_coding	-	CCDS85210.1	-	312	0	2.026	5.1	167.1	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000093877	Olfr1348	ENSMUST00000214383	ENSMUSP00000150969	TRANSLATION	protein_coding	-	CCDS85210.1	5	312	0	2.026	5.1	167.1	14	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000005611	Mrvi1	ENSMUST00000149923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005611	Mrvi1	ENSMUST00000127935	ENSMUSP00000120045	TRANSLATION	protein_coding	start	-	1	715	0	0	0	665.6	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000005611	Mrvi1	ENSMUST00000135590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005611	Mrvi1	ENSMUST00000154466	ENSMUSP00000120765	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005611	Mrvi1	ENSMUST00000005751	ENSMUSP00000005751	TRANSLATION	protein_coding	-	CCDS21749.1	1	856	0	0	0.5	665.6	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000005611	Mrvi1	ENSMUST00000142368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005611	Mrvi1	ENSMUST00000125758	ENSMUSP00000114578	TRANSLATION	protein_coding	-	CCDS52362.1	2	921	0	0	0.5	665.6	1	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000073913	Olfr678	ENSMUST00000213622	ENSMUSP00000150213	TRANSLATION	protein_coding	-	CCDS21639.1	5	313	0	0.42	5.2	383.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073913	Olfr678	ENSMUST00000098160	ENSMUSP00000095763	TRANSLATION	protein_coding	-	CCDS21639.1	-	313	0	0.42	5.2	383.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095081	Vmn1r257	ENSMUST00000178871	ENSMUSP00000137197	TRANSLATION	protein_coding	-	CCDS52118.1	-	306	0	0	1.5	57.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030887	Pdzd9	ENSMUST00000033178	ENSMUSP00000033178	TRANSLATION	protein_coding	-	CCDS40110.1	1	266	0	2.594	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030887	Pdzd9	ENSMUST00000127845	ENSMUSP00000147114	TRANSLATION	protein_coding	-	-	1	76	0	1.264	0	0	0	-4,-5	-	-	2.922	MINOR
ENSMUSG00000030887	Pdzd9	ENSMUST00000208635	ENSMUSP00000146476	TRANSLATION	protein_coding	-	-	1	83	0	1.264	0	0	0	-4,-5	-	-	2.922	MINOR
ENSMUSG00000030889	Vwa3a	ENSMUST00000168600	ENSMUSP00000132372	TRANSLATION	nonsense_mediated_decay	-	-	1	609	0	0	0	151.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030889	Vwa3a	ENSMUST00000168430	ENSMUSP00000146973	TRANSLATION	protein_coding	start	-	5	89	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000030889	Vwa3a	ENSMUST00000167213	ENSMUSP00000133029	TRANSLATION	protein_coding	-	CCDS40112.1	1	1148	4	0	1.5	206.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030889	Vwa3a	ENSMUST00000207721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030889	Vwa3a	ENSMUST00000165055	ENSMUSP00000129672	TRANSLATION	protein_coding	start	-	3	197	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030889	Vwa3a	ENSMUST00000033180	ENSMUSP00000033180	TRANSLATION	protein_coding	-	CCDS40112.1	5	1148	4	0	1.5	206.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030889	Vwa3a	ENSMUST00000166668	ENSMUSP00000129136	TRANSLATION	protein_coding	-	CCDS40112.1	1	1148	4	0	1.5	206.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030889	Vwa3a	ENSMUST00000166083	ENSMUSP00000129757	TRANSLATION	protein_coding	start	-	5	159	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046182	Gsg1l	ENSMUST00000073935	ENSMUSP00000073591	TRANSLATION	protein_coding	-	CCDS52395.1	1	322	0	0	1.5	145.7	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000099687	Olfr623	ENSMUST00000213840	ENSMUSP00000150141	TRANSLATION	protein_coding	-	CCDS21584.1	5	317	0	0.3	2.7	371.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099687	Olfr623	ENSMUST00000068531	ENSMUSP00000070658	TRANSLATION	protein_coding	-	CCDS21584.1	-	317	0	0.3	2.7	371.9	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030530	Furin	ENSMUST00000120753	ENSMUSP00000113793	TRANSLATION	protein_coding	-	CCDS21397.1	5	793	20	13.46	5.1	356	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000030530	Furin	ENSMUST00000107362	ENSMUSP00000102985	TRANSLATION	protein_coding	-	CCDS21397.1	5	793	20	13.46	5.1	356	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000030530	Furin	ENSMUST00000147150	ENSMUSP00000121028	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000030530	Furin	ENSMUST00000146771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030530	Furin	ENSMUST00000153446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030530	Furin	ENSMUST00000135306	ENSMUSP00000116734	TRANSLATION	protein_coding	stop	-	2	59	0	0.9	0	32.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000030530	Furin	ENSMUST00000206352	ENSMUSP00000146304	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030530	Furin	ENSMUST00000122232	ENSMUSP00000113370	TRANSLATION	protein_coding	-	CCDS21397.1	1	793	20	13.46	5.1	356	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000045132	Olfr620	ENSMUST00000052152	ENSMUSP00000061764	TRANSLATION	protein_coding	-	CCDS21582.1	-	313	0	0.36	2.7	454	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045132	Olfr620	ENSMUST00000217603	ENSMUSP00000148869	TRANSLATION	nonsense_mediated_decay	-	-	5	313	0	0.36	2.7	454	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000045132	Olfr620	ENSMUST00000215752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002266	Zim1	ENSMUST00000122432	ENSMUSP00000113585	TRANSLATION	protein_coding	-	CCDS20782.1	1	579	44	1.6	0.5	307.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000002266	Zim1	ENSMUST00000002336	ENSMUSP00000002336	TRANSLATION	protein_coding	-	CCDS20782.1	1	579	44	1.6	0.5	307.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000002266	Zim1	ENSMUST00000213399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002266	Zim1	ENSMUST00000203908	ENSMUSP00000145453	TRANSLATION	protein_coding	-	CCDS20782.1	5	579	44	1.6	0.5	307.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030717	Nupr1	ENSMUST00000151105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030717	Nupr1	ENSMUST00000191413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030717	Nupr1	ENSMUST00000191192	ENSMUSP00000139489	TRANSLATION	nonsense_mediated_decay	start	-	3	29	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030717	Nupr1	ENSMUST00000187609	ENSMUSP00000145914	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030717	Nupr1	ENSMUST00000032961	ENSMUSP00000032961	TRANSLATION	protein_coding	-	CCDS40127.1	1	80	0	0	1.5	85.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030717	Nupr1	ENSMUST00000131174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030835	Nomo1	ENSMUST00000182564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030835	Nomo1	ENSMUST00000033121	ENSMUSP00000033121	TRANSLATION	protein_coding	-	CCDS21273.1	1	1214	0	0	1.5	34.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030835	Nomo1	ENSMUST00000182531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030835	Nomo1	ENSMUST00000182842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030835	Nomo1	ENSMUST00000182305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097982	Scgb2b12	ENSMUST00000183195	ENSMUSP00000138687	TRANSLATION	protein_coding	-	CCDS59726.1	2	112	0	1.25	0.5	98.6	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030579	Tyrobp	ENSMUST00000032800	ENSMUSP00000032800	TRANSLATION	protein_coding	-	CCDS21089.1	1	114	0	1	1.5	0	3	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000030579	Tyrobp	ENSMUST00000208125	ENSMUSP00000146653	TRANSLATION	nonsense_mediated_decay	start	-	3	92	0	1	0	0	3	4,-1	-	-	-1	MINOR
ENSMUSG00000030579	Tyrobp	ENSMUST00000207982	ENSMUSP00000146494	TRANSLATION	protein_coding	start	-	1	141	0	1	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000030976	Tex36	ENSMUST00000033275	ENSMUSP00000033275	TRANSLATION	protein_coding	-	CCDS40163.1	1	219	0	0	0.5	213.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051007	Gatd1	ENSMUST00000106008	ENSMUSP00000101630	TRANSLATION	protein_coding	-	CCDS52444.1	1	220	0	3.26	12.8	0	0	0,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000051007	Gatd1	ENSMUST00000140337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051007	Gatd1	ENSMUST00000156353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051007	Gatd1	ENSMUST00000209276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051007	Gatd1	ENSMUST00000142852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051007	Gatd1	ENSMUST00000128006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051007	Gatd1	ENSMUST00000127556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030895	Hpx	ENSMUST00000033185	ENSMUSP00000033185	TRANSLATION	protein_coding	-	CCDS21654.1	1	460	24	9.59	1.5	145.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030895	Hpx	ENSMUST00000210531	ENSMUSP00000147802	TRANSLATION	protein_coding	stop	-	5	190	15	4.24	0	32.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050276	Mrgprg	ENSMUST00000058092	ENSMUSP00000060411	TRANSLATION	protein_coding	-	CCDS22045.1	1	289	0	0.42	1.5	24.2	7	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000050276	Mrgprg	ENSMUST00000208986	ENSMUSP00000146374	TRANSLATION	protein_coding	stop	-	-	156	0	0.42	0	24.2	4	0,-4	-	-	-1	MINOR
ENSMUSG00000070417	Olfr2	ENSMUST00000094109	ENSMUSP00000091656	TRANSLATION	protein_coding	-	CCDS21683.1	1	327	0	0.2	6.3	177.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070417	Olfr2	ENSMUST00000211432	ENSMUSP00000147893	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.2	6.3	177.9	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000070417	Olfr2	ENSMUST00000214105	ENSMUSP00000149104	TRANSLATION	protein_coding	-	CCDS21683.1	5	327	0	0.2	6.3	177.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070417	Olfr2	ENSMUST00000208147	ENSMUSP00000147026	TRANSLATION	protein_coding	-	CCDS21683.1	5	327	0	0.2	6.3	177.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070417	Olfr2	ENSMUST00000217764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070417	Olfr2	ENSMUST00000207280	ENSMUSP00000146957	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.2	6.3	177.9	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000070417	Olfr2	ENSMUST00000216375	ENSMUSP00000150093	TRANSLATION	protein_coding	-	CCDS21683.1	3	327	0	0.2	6.3	177.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048965	Mrgpre	ENSMUST00000054048	ENSMUSP00000058000	TRANSLATION	protein_coding	-	CCDS22046.1	1	310	0	0	1.5	22.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000074210	E130208F15Rik	ENSMUST00000098585	ENSMUSP00000096184	TRANSLATION	protein_coding	-	-	-	143	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000063089	Klk1b8	ENSMUST00000072204	ENSMUSP00000072063	TRANSLATION	protein_coding	-	CCDS21189.1	1	261	7	4.4	0.5	228	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000069390	Olfr707	ENSMUST00000210644	ENSMUSP00000147446	TRANSLATION	protein_coding	-	CCDS21678.1	3	307	0	0.4	5.1	196.3	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000069390	Olfr707	ENSMUST00000214112	ENSMUSP00000150100	TRANSLATION	protein_coding	-	CCDS21678.1	5	307	0	0.4	5.1	196.3	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000069390	Olfr707	ENSMUST00000213251	ENSMUSP00000150235	TRANSLATION	protein_coding	-	CCDS21678.1	5	307	0	0.4	5.1	196.3	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000069390	Olfr707	ENSMUST00000088687	ENSMUSP00000086062	TRANSLATION	protein_coding	-	CCDS21678.1	-	307	0	0.4	5.1	196.3	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000069390	Olfr707	ENSMUST00000208759	ENSMUSP00000146644	TRANSLATION	protein_coding	-	CCDS21678.1	3	307	0	0.4	5.1	196.3	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053175	Bcl3	ENSMUST00000120537	ENSMUSP00000113851	TRANSLATION	protein_coding	-	CCDS20914.2	1	448	0	5.7	1.5	103.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053175	Bcl3	ENSMUST00000135609	ENSMUSP00000117754	TRANSLATION	protein_coding	start	-	3	114	0	1.8	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000053175	Bcl3	ENSMUST00000123375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053175	Bcl3	ENSMUST00000152768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053175	Bcl3	ENSMUST00000139680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053175	Bcl3	ENSMUST00000141996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040364	Sec1	ENSMUST00000040636	ENSMUSP00000045229	TRANSLATION	protein_coding	-	CCDS71963.1	1	389	8	0	1.5	477.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030432	Rpl28	ENSMUST00000078432	ENSMUSP00000104217	TRANSLATION	protein_coding	-	CCDS39742.1	2	137	0	0	13.5	124	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000030432	Rpl28	ENSMUST00000206617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030432	Rpl28	ENSMUST00000032597	ENSMUSP00000032597	TRANSLATION	protein_coding	-	CCDS39742.1	1	137	0	0	13.5	124	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000030432	Rpl28	ENSMUST00000129888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030432	Rpl28	ENSMUST00000126794	ENSMUSP00000117699	TRANSLATION	protein_coding	start	-	2	85	0	0	0	40.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057894	Zfp329	ENSMUST00000121215	ENSMUSP00000113355	TRANSLATION	nonsense_mediated_decay	-	-	1	522	48	1.28	0.5	284.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057894	Zfp329	ENSMUST00000108546	ENSMUSP00000104186	TRANSLATION	protein_coding	-	-	1	312	12	1.08	0	82.3	0	-4,-5	-	-	5.064	MINOR
ENSMUSG00000057894	Zfp329	ENSMUST00000129647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057894	Zfp329	ENSMUST00000072222	ENSMUSP00000072079	TRANSLATION	protein_coding	-	CCDS20813.1	1	522	48	1.28	0.5	284.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045013	Olfr711	ENSMUST00000207200	ENSMUSP00000146570	TRANSLATION	protein_coding	-	CCDS21682.1	2	314	0	0.2	5.1	196.9	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045013	Olfr711	ENSMUST00000216335	ENSMUSP00000149016	TRANSLATION	protein_coding	-	CCDS21682.1	5	314	0	0.2	5.1	196.9	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045013	Olfr711	ENSMUST00000051715	ENSMUSP00000055724	TRANSLATION	protein_coding	-	CCDS21682.1	2	314	0	0.2	5.1	196.9	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096737	Vmn1r117	ENSMUST00000166937	ENSMUSP00000131580	TRANSLATION	protein_coding	-	CCDS52085.1	-	307	0	0	1.5	56.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030505	Prmt3	ENSMUST00000147401	ENSMUSP00000115155	TRANSLATION	nonsense_mediated_decay	-	-	5	64	3	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030505	Prmt3	ENSMUST00000140656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030505	Prmt3	ENSMUST00000148996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030505	Prmt3	ENSMUST00000146052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030505	Prmt3	ENSMUST00000145666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030505	Prmt3	ENSMUST00000130907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030505	Prmt3	ENSMUST00000152127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030505	Prmt3	ENSMUST00000032715	ENSMUSP00000032715	TRANSLATION	protein_coding	-	CCDS21307.1	1	528	22	12.48	1.5	37.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030505	Prmt3	ENSMUST00000207216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055643	Ubqln5	ENSMUST00000053743	ENSMUSP00000062054	TRANSLATION	protein_coding	-	CCDS52341.1	-	510	0	0.4	1.5	74.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030869	Ndufab1	ENSMUST00000153173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030869	Ndufab1	ENSMUST00000130904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030869	Ndufab1	ENSMUST00000139456	ENSMUSP00000114756	TRANSLATION	protein_coding	start	-	2	127	3	2.75	0	45.9	0	-3,0	-	-	-1	MINOR
ENSMUSG00000030869	Ndufab1	ENSMUST00000145863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030869	Ndufab1	ENSMUST00000146964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030869	Ndufab1	ENSMUST00000033157	ENSMUSP00000033157	TRANSLATION	protein_coding	-	CCDS21809.1	1	156	3	2.75	6.3	45.9	0	-1,2	-	-	17	PRINCIPAL:1
ENSMUSG00000030869	Ndufab1	ENSMUST00000130857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030869	Ndufab1	ENSMUST00000123296	ENSMUSP00000116177	TRANSLATION	protein_coding	-	CCDS21809.1	1	156	3	2.75	6.3	45.9	0	-1,2	-	-	17	PRINCIPAL:1
ENSMUSG00000030869	Ndufab1	ENSMUST00000106471	ENSMUSP00000102079	TRANSLATION	protein_coding	start	-	3	128	3	2.75	0	45.9	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000030869	Ndufab1	ENSMUST00000146022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058717	Lypd11	ENSMUST00000081657	ENSMUSP00000080361	TRANSLATION	protein_coding	-	CCDS39832.1	1	196	0	0	0.5	29.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058717	Lypd11	ENSMUST00000205376	ENSMUSP00000145595	TRANSLATION	protein_coding	-	-	3	192	0	0	0.5	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000058717	Lypd11	ENSMUST00000206243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073909	Olfr688	ENSMUST00000098155	ENSMUSP00000095758	TRANSLATION	protein_coding	-	CCDS52348.1	-	321	0	0.2	5.1	253.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000109859	Gm45618	ENSMUST00000209890	ENSMUSP00000147854	TRANSLATION	protein_coding	-	CCDS85462.1	-	219	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000109336	Samd4b	ENSMUST00000207766	ENSMUSP00000146984	TRANSLATION	nonsense_mediated_decay	-	-	5	230	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000109336	Samd4b	ENSMUST00000040531	ENSMUSP00000040486	TRANSLATION	protein_coding	-	CCDS21044.1	5	687	0	1.75	1.5	41.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109336	Samd4b	ENSMUST00000208199	ENSMUSP00000147037	TRANSLATION	protein_coding	-	CCDS21044.1	5	687	0	1.75	1.5	41.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109336	Samd4b	ENSMUST00000208676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109336	Samd4b	ENSMUST00000208126	ENSMUSP00000146657	TRANSLATION	protein_coding	start	-	3	132	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000054102	Nlrp9a	ENSMUST00000108387	ENSMUSP00000104024	TRANSLATION	protein_coding	-	CCDS39844.1	1	1004	6	6.8	0.5	211.1	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000054102	Nlrp9a	ENSMUST00000122040	ENSMUSP00000113318	TRANSLATION	protein_coding	-	CCDS39845.1	1	949	6	6.5	0.5	211.1	0	-4,-5	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000054102	Nlrp9a	ENSMUST00000117252	ENSMUSP00000112398	TRANSLATION	protein_coding	-	-	2	931	6	5.725	0	191.6	0	-4,-5	-	-	14.682	MINOR
ENSMUSG00000054102	Nlrp9a	ENSMUST00000153452	ENSMUSP00000120498	TRANSLATION	protein_coding	stop	-	5	751	6	3.4	0	107	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054102	Nlrp9a	ENSMUST00000143149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054102	Nlrp9a	ENSMUST00000071780	ENSMUSP00000071685	TRANSLATION	protein_coding	-	CCDS39845.1	5	949	6	6.5	0.5	211.1	0	-4,-5	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000052572	Dlg2	ENSMUST00000128592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000238608	ENSMUSP00000158616	TRANSLATION	protein_coding	-	-	-	901	14	15.465	0	617.8	0	-4,-6	-	-	8.94	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000238467	ENSMUSP00000158695	TRANSLATION	protein_coding	-	-	-	919	14	15.465	1.7	617.8	0	-4,-6	-	-	9.181	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000135581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000146563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000208377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000107193	ENSMUSP00000102811	TRANSLATION	protein_coding	-	-	5	755	14	15.365	0.5	557.8	0	-4,-7	-	-	8.742	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000239136	ENSMUSP00000159135	TRANSLATION	protein_coding	stop	-	-	78	0	1.5	0	57.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000207891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000231777	ENSMUSP00000155862	TRANSLATION	protein_coding	-	-	-	994	14	16.995	1.7	726.4	0	-4,-5	-	-	18.241	PRINCIPAL:1
ENSMUSG00000052572	Dlg2	ENSMUST00000074273	ENSMUSP00000073885	TRANSLATION	protein_coding	-	-	5	870	14	15.045	3.6	635.6	0	-4,-7	-	-	9.549	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000129818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000238619	ENSMUSP00000158731	TRANSLATION	protein_coding	-	-	-	887	14	15.365	0	617.8	0	-4,-6	-	-	8.742	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000107196	ENSMUSP00000102814	TRANSLATION	protein_coding	-	CCDS40021.1	1	852	14	15.045	3.9	635.6	0	-4,-7	-	-	9.652	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000207095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000208919	ENSMUSP00000159178	TRANSLATION	protein_coding	stop	-	3	47	0	1.33	0	59.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052572	Dlg2	ENSMUST00000152139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000238788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052572	Dlg2	ENSMUST00000138389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000209170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000207798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052572	Dlg2	ENSMUST00000098308	ENSMUSP00000095910	TRANSLATION	protein_coding	-	CCDS57562.1	1	481	14	10.155	0.5	329.4	0	-4,-6	-	-	6	MINOR
ENSMUSG00000096386	Vmn1r100	ENSMUST00000177815	ENSMUSP00000137480	TRANSLATION	protein_coding	-	CCDS52072.1	-	307	0	0	1.5	53.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030401	Rtn2	ENSMUST00000032559	ENSMUSP00000032559	TRANSLATION	protein_coding	-	CCDS20896.1	1	471	0	1.2	1.5	149	3	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000030401	Rtn2	ENSMUST00000108468	ENSMUSP00000104108	TRANSLATION	protein_coding	-	CCDS39797.1	1	204	0	1.2	1.5	149	3	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030401	Rtn2	ENSMUST00000209186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054759	Krtap5-2	ENSMUST00000190456	ENSMUSP00000140784	TRANSLATION	protein_coding	-	CCDS80832.1	-	367	0	0	0.5	25.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000054759	Krtap5-2	ENSMUST00000067978	ENSMUSP00000070557	TRANSLATION	protein_coding	-	-	5	189	0	0	0	25.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094931	Vmn1r160	ENSMUST00000171745	ENSMUSP00000129858	TRANSLATION	protein_coding	-	CCDS52122.1	-	307	0	0	1.5	58.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042055	Wdr11	ENSMUST00000136734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042055	Wdr11	ENSMUST00000136560	ENSMUSP00000145935	TRANSLATION	nonsense_mediated_decay	start	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042055	Wdr11	ENSMUST00000084519	ENSMUSP00000081567	TRANSLATION	protein_coding	-	CCDS40155.1	1	1223	0	0	5.1	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000042055	Wdr11	ENSMUST00000206442	ENSMUSP00000146228	TRANSLATION	protein_coding	start	-	3	123	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000042055	Wdr11	ENSMUST00000143422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042055	Wdr11	ENSMUST00000149541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042055	Wdr11	ENSMUST00000148752	ENSMUSP00000146236	TRANSLATION	nonsense_mediated_decay	start	-	5	387	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042055	Wdr11	ENSMUST00000140877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042055	Wdr11	ENSMUST00000143849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030509	Asb7	ENSMUST00000207785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030509	Asb7	ENSMUST00000068980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030509	Asb7	ENSMUST00000208059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030509	Asb7	ENSMUST00000124899	ENSMUSP00000122395	TRANSLATION	protein_coding	-	CCDS21346.1	1	318	0	2.24	21.5	208.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030509	Asb7	ENSMUST00000207210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030509	Asb7	ENSMUST00000131320	ENSMUSP00000115921	TRANSLATION	nonsense_mediated_decay	-	-	2	89	0	0.9	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062300	Nectin2	ENSMUST00000108450	ENSMUSP00000104089	TRANSLATION	protein_coding	-	CCDS52063.1	1	467	0	4	1.5	108.6	1	3,-1	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000062300	Nectin2	ENSMUST00000075447	ENSMUSP00000074898	TRANSLATION	protein_coding	-	CCDS20913.1	1	530	0	4.2	1.5	108.6	1	3,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000062300	Nectin2	ENSMUST00000207271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030588	Yif1b	ENSMUST00000032809	ENSMUSP00000032809	TRANSLATION	protein_coding	-	CCDS21069.1	1	311	0	0	1.5	285.6	6	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000030588	Yif1b	ENSMUST00000138128	ENSMUSP00000117224	TRANSLATION	protein_coding	start/stop	-	2	272	0	0	0	244.9	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000030588	Yif1b	ENSMUST00000108238	ENSMUSP00000103873	TRANSLATION	protein_coding	-	CCDS52171.1	1	308	0	0	1.5	285.6	6	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000030588	Yif1b	ENSMUST00000108237	ENSMUSP00000103872	TRANSLATION	protein_coding	-	-	5	251	0	0	0	197.2	4	-4,-2	-	-	0.696	MINOR
ENSMUSG00000030588	Yif1b	ENSMUST00000142519	ENSMUSP00000146477	TRANSLATION	protein_coding	start	-	5	315	0	0	0	285.6	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000142880	ENSMUSP00000146332	TRANSLATION	protein_coding	start/stop	-	3	111	0	0	0	102	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000054343	ENSMUSP00000049764	TRANSLATION	protein_coding	-	CCDS21218.1	1	257	0	0	2.7	164.6	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000011096	Akt1s1	ENSMUST00000107885	ENSMUSP00000103517	TRANSLATION	protein_coding	-	-	1	328	0	0	0.5	164.6	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000011096	Akt1s1	ENSMUST00000208384	ENSMUSP00000147235	TRANSLATION	protein_coding	stop	-	2	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000107880	ENSMUSP00000103512	TRANSLATION	protein_coding	-	CCDS21218.1	1	257	0	0	2.7	164.6	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000011096	Akt1s1	ENSMUST00000107882	ENSMUSP00000103514	TRANSLATION	protein_coding	-	CCDS71954.1	3	283	0	0	0.5	164.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000011096	Akt1s1	ENSMUST00000150335	ENSMUSP00000122607	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000136232	ENSMUSP00000116541	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000141311	ENSMUSP00000120690	TRANSLATION	protein_coding	stop	-	2	193	0	0	0	51.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000207223	ENSMUSP00000146484	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011096	Akt1s1	ENSMUST00000152091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011096	Akt1s1	ENSMUST00000127783	ENSMUSP00000116149	TRANSLATION	protein_coding	stop	-	5	247	0	0	0	135.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000116179	Olfr290	ENSMUST00000073468	ENSMUSP00000073172	TRANSLATION	protein_coding	-	CCDS21421.1	-	315	0	0.42	2.7	178	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030838	Ush1c	ENSMUST00000148527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030838	Ush1c	ENSMUST00000143155	ENSMUSP00000119676	TRANSLATION	nonsense_mediated_decay	-	-	1	859	0	11.23	0.5	141.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030838	Ush1c	ENSMUST00000176371	ENSMUSP00000134783	TRANSLATION	protein_coding	-	-	5	517	0	10.23	0.5	141.7	0	-4,-7	-	-	10.002	MINOR
ENSMUSG00000030838	Ush1c	ENSMUST00000177212	ENSMUSP00000135734	TRANSLATION	protein_coding	-	-	5	529	0	10.73	1.2	129.7	0	-4,-5	-	-	10.347	MINOR
ENSMUSG00000030838	Ush1c	ENSMUST00000078680	ENSMUSP00000077747	TRANSLATION	protein_coding	-	CCDS39963.1	1	548	0	11.23	3.9	141.7	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000030838	Ush1c	ENSMUST00000009667	ENSMUSP00000009667	TRANSLATION	protein_coding	-	CCDS21276.1	1	910	0	11.23	1.5	141.7	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000030838	Ush1c	ENSMUST00000238793	ENSMUSP00000158923	TRANSLATION	protein_coding	stop	-	-	223	0	3.98	0	52.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030838	Ush1c	ENSMUST00000154292	ENSMUSP00000114494	TRANSLATION	protein_coding	-	CCDS52250.1	1	891	0	11.23	0.5	141.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030838	Ush1c	ENSMUST00000129266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092456	V1rd19	ENSMUST00000173571	ENSMUSP00000133284	TRANSLATION	protein_coding	-	CCDS52137.1	-	305	0	0	1.5	43.6	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000092456	V1rd19	ENSMUST00000236162	ENSMUSP00000158293	TRANSLATION	protein_coding	-	CCDS52137.1	-	305	0	0	1.5	43.6	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000009687	Fxyd5	ENSMUST00000202395	ENSMUSP00000144377	TRANSLATION	protein_coding	stop	-	3	108	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000009687	Fxyd5	ENSMUST00000160006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009687	Fxyd5	ENSMUST00000162250	ENSMUSP00000124129	TRANSLATION	protein_coding	start	-	5	127	0	1.446	0	64.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000009687	Fxyd5	ENSMUST00000159753	ENSMUSP00000123813	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	0	0	4,-2	-	-	-1	MINOR
ENSMUSG00000009687	Fxyd5	ENSMUST00000159924	ENSMUSP00000124219	TRANSLATION	protein_coding	-	CCDS21121.1	5	178	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	PRINCIPAL:3
ENSMUSG00000009687	Fxyd5	ENSMUST00000009831	ENSMUSP00000009831	TRANSLATION	protein_coding	-	CCDS71935.1	3	179	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	ALTERNATIVE:2
ENSMUSG00000009687	Fxyd5	ENSMUST00000161684	ENSMUSP00000125285	TRANSLATION	protein_coding	-	CCDS21121.1	1	178	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	PRINCIPAL:3
ENSMUSG00000009687	Fxyd5	ENSMUST00000160689	ENSMUSP00000125187	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	4,-3	-	-	-1	MINOR
ENSMUSG00000009687	Fxyd5	ENSMUST00000162087	ENSMUSP00000125065	TRANSLATION	protein_coding	-	CCDS21121.1	3	178	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	PRINCIPAL:3
ENSMUSG00000009687	Fxyd5	ENSMUST00000162733	ENSMUSP00000125173	TRANSLATION	protein_coding	-	-	1	185	0	1.596	0	51.7	1	4,-2	-	-	10.824	ALTERNATIVE:2
ENSMUSG00000009687	Fxyd5	ENSMUST00000161805	ENSMUSP00000125398	TRANSLATION	protein_coding	-	CCDS21121.1	1	178	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	PRINCIPAL:3
ENSMUSG00000009687	Fxyd5	ENSMUST00000205301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009687	Fxyd5	ENSMUST00000161259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009687	Fxyd5	ENSMUST00000162116	ENSMUSP00000124203	TRANSLATION	protein_coding	-	CCDS21121.1	5	178	0	1.446	1.5	64.3	1	4,-2	-	-	11.436	PRINCIPAL:3
ENSMUSG00000058402	Zfp420	ENSMUST00000074876	ENSMUSP00000074417	TRANSLATION	protein_coding	-	CCDS52175.1	1	578	76	0.4	1.5	442.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000058402	Zfp420	ENSMUST00000057652	ENSMUSP00000056077	TRANSLATION	protein_coding	-	CCDS52175.1	1	578	76	0.4	1.5	442.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000058402	Zfp420	ENSMUST00000148489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058402	Zfp420	ENSMUST00000130272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058402	Zfp420	ENSMUST00000145952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074361	C5ar2	ENSMUST00000171425	ENSMUSP00000133056	TRANSLATION	protein_coding	-	-	1	344	0	0.42	1.5	98	10	-4,-6	-	-	10.08	MINOR
ENSMUSG00000074361	C5ar2	ENSMUST00000238927	ENSMUSP00000158951	TRANSLATION	protein_coding	-	-	-	344	0	0.42	1.5	98	10	-4,-6	-	-	10.08	MINOR
ENSMUSG00000074361	C5ar2	ENSMUST00000098792	ENSMUSP00000096389	TRANSLATION	protein_coding	-	CCDS52036.1	1	358	0	0.618	0.5	98	10	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000074361	C5ar2	ENSMUST00000238893	ENSMUSP00000159074	TRANSLATION	protein_coding	-	CCDS52037.1	-	358	0	0.42	0.5	98	10	-4,-6	-	-	10.08	MINOR
ENSMUSG00000092518	Fam71e2	ENSMUST00000174409	ENSMUSP00000133885	TRANSLATION	protein_coding	-	CCDS57474.1	5	754	0	0	0.5	67.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000092518	Fam71e2	ENSMUST00000163574	ENSMUSP00000137684	TRANSLATION	nonsense_mediated_decay	-	-	1	127	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000116184	4632433K11Rik	ENSMUST00000076791	ENSMUSP00000076071	TRANSLATION	protein_coding	-	-	-	138	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000000215	Ins2	ENSMUST00000162317	ENSMUSP00000124643	TRANSLATION	protein_coding	-	-	5	98	0	2.33	0	75.6	0	4,-1	-	-	9.792	MINOR
ENSMUSG00000000215	Ins2	ENSMUST00000105932	ENSMUSP00000101552	TRANSLATION	protein_coding	-	CCDS22034.1	1	110	0	2.83	6.3	93.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000000215	Ins2	ENSMUST00000210288	ENSMUSP00000147425	TRANSLATION	protein_coding	-	CCDS22034.1	5	110	0	2.83	6.3	93.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000000215	Ins2	ENSMUST00000105930	ENSMUSP00000101550	TRANSLATION	protein_coding	-	-	3	79	0	1	0	42.6	0	4,-1	-	-	4.854	MINOR
ENSMUSG00000000215	Ins2	ENSMUST00000105931	ENSMUSP00000101551	TRANSLATION	protein_coding	-	-	1	106	0	1	0	43.6	0	4,-1	-	-	4.914	MINOR
ENSMUSG00000000215	Ins2	ENSMUST00000105933	ENSMUSP00000101553	TRANSLATION	protein_coding	-	CCDS22034.1	1	110	0	2.83	6.3	93.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000000215	Ins2	ENSMUST00000125933	ENSMUSP00000115147	TRANSLATION	protein_coding	stop	-	5	70	0	1.33	0	44.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000215	Ins2	ENSMUST00000105934	ENSMUSP00000101554	TRANSLATION	protein_coding	-	CCDS22034.1	3	110	0	2.83	6.3	93.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000000215	Ins2	ENSMUST00000000220	ENSMUSP00000000220	TRANSLATION	protein_coding	-	CCDS22034.1	1	110	0	2.83	6.3	93.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000228478	ENSMUSP00000154418	TRANSLATION	protein_coding	-	-	-	240	0	0	0	104	6	-4,-7	-	-	5.838	MINOR
ENSMUSG00000091662	Vmn1r69	ENSMUST00000226228	ENSMUSP00000154076	TRANSLATION	protein_coding	-	CCDS20793.1	-	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000226990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091662	Vmn1r69	ENSMUST00000226160	ENSMUSP00000154435	TRANSLATION	protein_coding	-	CCDS20793.1	-	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000227853	ENSMUSP00000154231	TRANSLATION	protein_coding	-	-	-	240	0	0	0	104	6	-4,-7	-	-	5.838	MINOR
ENSMUSG00000091662	Vmn1r69	ENSMUST00000176707	ENSMUSP00000134833	TRANSLATION	protein_coding	-	CCDS20793.1	2	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000176284	ENSMUSP00000134993	TRANSLATION	protein_coding	-	CCDS20793.1	2	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000228638	ENSMUSP00000154473	TRANSLATION	protein_coding	-	-	-	240	0	0	0	104	6	-4,-7	-	-	5.838	MINOR
ENSMUSG00000091662	Vmn1r69	ENSMUST00000226190	ENSMUSP00000153891	TRANSLATION	protein_coding	-	CCDS20793.1	-	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000163658	ENSMUSP00000129646	TRANSLATION	protein_coding	-	CCDS20793.1	-	319	0	0	0.5	106.7	8	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091662	Vmn1r69	ENSMUST00000228296	ENSMUSP00000154641	TRANSLATION	protein_coding	-	-	-	240	0	0	0	104	6	-4,-7	-	-	5.838	MINOR
ENSMUSG00000030616	Sytl2	ENSMUST00000208486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000208720	ENSMUSP00000147191	TRANSLATION	non_stop_decay	stop	-	1	529	0	2	0	27.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030616	Sytl2	ENSMUST00000207431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030616	Sytl2	ENSMUST00000207064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000107211	ENSMUSP00000102829	TRANSLATION	protein_coding	-	CCDS40018.1	1	934	8	6.22	1.5	148.3	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000030616	Sytl2	ENSMUST00000207872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000107210	ENSMUSP00000102828	TRANSLATION	protein_coding	-	CCDS40017.1	1	910	8	6.22	1.5	148.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030616	Sytl2	ENSMUST00000209188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000190731	ENSMUSP00000139865	TRANSLATION	protein_coding	-	CCDS80750.1	1	950	8	6.22	1.5	148.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030616	Sytl2	ENSMUST00000207578	ENSMUSP00000146353	TRANSLATION	protein_coding	stop	-	5	211	0	2	0	27.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030616	Sytl2	ENSMUST00000208809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000190837	ENSMUSP00000139450	TRANSLATION	protein_coding	-	CCDS80751.1	1	923	8	6.22	0.5	148.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030616	Sytl2	ENSMUST00000189194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000208580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000207455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000239078	ENSMUSP00000158976	TRANSLATION	protein_coding	-	-	-	2153	8	6.22	0.5	148.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030616	Sytl2	ENSMUST00000207629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000207928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030616	Sytl2	ENSMUST00000190365	ENSMUSP00000158979	TRANSLATION	protein_coding	-	-	1	2097	8	6.22	0.5	148.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030616	Sytl2	ENSMUST00000098310	ENSMUSP00000158991	TRANSLATION	protein_coding	-	-	1	1280	8	4.22	0	120.9	0	-4,-5	-	-	12.354	MINOR
ENSMUSG00000038650	Rnh1	ENSMUST00000209378	ENSMUSP00000147511	TRANSLATION	protein_coding	stop	-	3	199	0	4.5	0	34.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038650	Rnh1	ENSMUST00000106033	ENSMUSP00000101651	TRANSLATION	protein_coding	-	CCDS22002.1	1	456	0	9.25	2.7	126.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000038650	Rnh1	ENSMUST00000210314	ENSMUSP00000147928	TRANSLATION	protein_coding	-	CCDS85455.1	1	492	0	9.25	1.5	126.5	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000038650	Rnh1	ENSMUST00000167493	ENSMUSP00000133061	TRANSLATION	protein_coding	-	CCDS22002.1	1	456	0	9.25	2.7	126.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000038650	Rnh1	ENSMUST00000210979	ENSMUSP00000147718	TRANSLATION	protein_coding	stop	-	3	120	0	2.75	0	12.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045929	Gm20715	ENSMUST00000054781	ENSMUSP00000050428	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	95	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000074211	Sdhaf1	ENSMUST00000098586	ENSMUSP00000096185	TRANSLATION	protein_coding	-	CCDS39881.1	-	118	0	0	1.5	44.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000030555	Ttc23	ENSMUST00000155024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000145348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000154697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000208764	ENSMUSP00000146428	TRANSLATION	nonsense_mediated_decay	start	-	5	252	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030555	Ttc23	ENSMUST00000137919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000130681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000135236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000126093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000032774	ENSMUSP00000032774	TRANSLATION	protein_coding	-	CCDS21352.1	1	488	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000030555	Ttc23	ENSMUST00000125839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030555	Ttc23	ENSMUST00000107470	ENSMUSP00000103094	TRANSLATION	protein_coding	-	CCDS52270.1	5	446	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000030555	Ttc23	ENSMUST00000133710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030555	Ttc23	ENSMUST00000107471	ENSMUSP00000103095	TRANSLATION	protein_coding	-	CCDS52270.1	1	446	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000030555	Ttc23	ENSMUST00000153475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093973	Mrgpra2a	ENSMUST00000159004	ENSMUSP00000124631	TRANSLATION	protein_coding	-	CCDS52256.1	1	331	0	0.36	0.5	55.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030417	Pdcd5	ENSMUST00000130340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030417	Pdcd5	ENSMUST00000151336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030417	Pdcd5	ENSMUST00000120714	ENSMUSP00000113013	TRANSLATION	protein_coding	-	-	3	205	0	3.2	0	107.1	0	-4,-1	-	-	9.972	MINOR
ENSMUSG00000030417	Pdcd5	ENSMUST00000130306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030417	Pdcd5	ENSMUST00000126734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030417	Pdcd5	ENSMUST00000127213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030417	Pdcd5	ENSMUST00000118501	ENSMUSP00000113761	TRANSLATION	protein_coding	-	CCDS52203.1	1	126	0	3.95	15.8	115.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078813	Leng1	ENSMUST00000019878	ENSMUSP00000019878	TRANSLATION	protein_coding	-	CCDS20722.1	1	261	0	0	1.5	30.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051735	Rinl	ENSMUST00000207201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051735	Rinl	ENSMUST00000207345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051735	Rinl	ENSMUST00000059857	ENSMUSP00000058447	TRANSLATION	protein_coding	-	CCDS21056.1	1	563	0	0	0.5	67.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000051735	Rinl	ENSMUST00000209035	ENSMUSP00000146576	TRANSLATION	protein_coding	-	CCDS21056.1	1	563	0	0	0.5	67.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000051735	Rinl	ENSMUST00000208149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051735	Rinl	ENSMUST00000207462	ENSMUSP00000146741	TRANSLATION	protein_coding	start	-	2	117	0	0	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030805	Stx4a	ENSMUST00000142849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030805	Stx4a	ENSMUST00000121705	ENSMUSP00000112927	TRANSLATION	protein_coding	-	CCDS21880.1	1	298	0	7.014	7.6	203.6	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030805	Stx4a	ENSMUST00000123180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030805	Stx4a	ENSMUST00000033075	ENSMUSP00000033075	TRANSLATION	protein_coding	-	CCDS21880.1	1	298	0	7.014	7.6	203.6	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030805	Stx4a	ENSMUST00000138399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030805	Stx4a	ENSMUST00000152310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030805	Stx4a	ENSMUST00000156537	ENSMUSP00000118034	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	0.664	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030805	Stx4a	ENSMUST00000125861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030805	Stx4a	ENSMUST00000138294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030468	Siglecg	ENSMUST00000124885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030468	Siglecg	ENSMUST00000124502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030468	Siglecg	ENSMUST00000005592	ENSMUSP00000005592	TRANSLATION	protein_coding	-	CCDS52221.1	1	688	0	4.29	0.5	85.3	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030468	Siglecg	ENSMUST00000123042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030468	Siglecg	ENSMUST00000154322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030468	Siglecg	ENSMUST00000131744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000206379	ENSMUSP00000146067	TRANSLATION	protein_coding	stop	-	5	120	0	0	0	0	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000127106	ENSMUSP00000116446	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0	0	0	4	-2,-5	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000133223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000118710	ENSMUSP00000112710	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	30.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000128364	ENSMUSP00000120521	TRANSLATION	protein_coding	start	-	3	123	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000206343	ENSMUSP00000145657	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000131688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000205644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000150785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000150684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035596	Mboat7	ENSMUST00000206571	ENSMUSP00000145801	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000035596	Mboat7	ENSMUST00000038608	ENSMUSP00000037107	TRANSLATION	protein_coding	-	CCDS20724.1	1	473	0	0	6.3	120.8	11	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000035596	Mboat7	ENSMUST00000206448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030757	Zkscan2	ENSMUST00000128217	ENSMUSP00000134381	TRANSLATION	protein_coding	-	-	1	271	0	0.8	0	124.9	0	-4,-5	-	-	3	MINOR
ENSMUSG00000030757	Zkscan2	ENSMUST00000042470	ENSMUSP00000041821	TRANSLATION	protein_coding	-	CCDS40119.1	1	960	24	1.6	1.5	392.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030757	Zkscan2	ENSMUST00000125356	ENSMUSP00000122270	TRANSLATION	protein_coding	start	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030757	Zkscan2	ENSMUST00000206148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030545	Pex11a	ENSMUST00000032761	ENSMUSP00000032761	TRANSLATION	protein_coding	-	CCDS21386.1	1	246	0	0	7.5	245.7	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000030545	Pex11a	ENSMUST00000205297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030545	Pex11a	ENSMUST00000139620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030545	Pex11a	ENSMUST00000150606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078800	Bsph2	ENSMUST00000108526	ENSMUSP00000104166	TRANSLATION	protein_coding	-	CCDS52028.1	1	131	9	2.75	0.5	98.3	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078800	Bsph2	ENSMUST00000202285	ENSMUSP00000144514	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000118959	ENSMUSP00000114122	TRANSLATION	protein_coding	-	-	1	300	0	7.75	0	347.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000126456	ENSMUSP00000114513	TRANSLATION	protein_coding	stop	-	3	73	0	2.25	0	88.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000132091	ENSMUSP00000122113	TRANSLATION	nonsense_mediated_decay	-	-	1	394	0	10.2186	0	467.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000137667	ENSMUSP00000117992	TRANSLATION	protein_coding	start	-	1	850	0	21.16	0	982.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000205817	ENSMUSP00000146293	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	1.33	0	52.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039187	Fanci	ENSMUST00000036865	ENSMUSP00000044931	TRANSLATION	protein_coding	-	CCDS39991.1	5	1330	0	33.91	0.5	1517.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039187	Fanci	ENSMUST00000206121	ENSMUSP00000146237	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	2.25	0	59.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000002635	Pdcd2l	ENSMUST00000125803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002635	Pdcd2l	ENSMUST00000206088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002635	Pdcd2l	ENSMUST00000148381	ENSMUSP00000115874	TRANSLATION	protein_coding	start	-	3	274	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002635	Pdcd2l	ENSMUST00000002710	ENSMUSP00000002710	TRANSLATION	protein_coding	-	CCDS21137.1	1	364	4	0	0.5	139.9	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000070546	Mrgprb3	ENSMUST00000094383	ENSMUSP00000091945	TRANSLATION	protein_coding	-	CCDS21304.1	-	312	0	0	0.5	24	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000063823	Olfr532	ENSMUST00000213172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063823	Olfr532	ENSMUST00000213801	ENSMUSP00000150798	TRANSLATION	protein_coding	-	CCDS21976.1	5	309	0	0.3	1.5	172.3	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063823	Olfr532	ENSMUST00000073226	ENSMUSP00000072959	TRANSLATION	protein_coding	-	CCDS21976.1	-	309	0	0.3	1.5	172.3	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000046716	Vmn1r67	ENSMUST00000226237	ENSMUSP00000154237	TRANSLATION	protein_coding	-	-	-	244	0	0	0	99.1	4	-4,-5	-	-	5.766	ALTERNATIVE:2
ENSMUSG00000046716	Vmn1r67	ENSMUST00000055964	ENSMUSP00000060746	TRANSLATION	protein_coding	-	CCDS39766.1	-	305	0	0	1.5	103	6	-2,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000064307	Lrrc51	ENSMUST00000098236	ENSMUSP00000095838	TRANSLATION	protein_coding	-	CCDS52331.1	1	146	0	1.7	1.7	27.5	0	-4,-5	-	-	10.344	MINOR
ENSMUSG00000064307	Lrrc51	ENSMUST00000106966	ENSMUSP00000102579	TRANSLATION	protein_coding	-	CCDS52332.1	2	192	0	2.5	6.3	27.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000064307	Lrrc51	ENSMUST00000106968	ENSMUSP00000102581	TRANSLATION	protein_coding	-	CCDS52332.1	2	192	0	2.5	6.3	27.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000064307	Lrrc51	ENSMUST00000130155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064307	Lrrc51	ENSMUST00000078448	ENSMUSP00000077543	TRANSLATION	protein_coding	-	CCDS52332.1	1	192	0	2.5	6.3	27.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000064307	Lrrc51	ENSMUST00000106967	ENSMUSP00000102580	TRANSLATION	protein_coding	-	-	3	159	0	1.9	0	27.5	0	-4,-5	-	-	10.56	MINOR
ENSMUSG00000064307	Lrrc51	ENSMUST00000106964	ENSMUSP00000102577	TRANSLATION	protein_coding	-	CCDS52331.1	2	146	0	1.7	1.7	27.5	0	-4,-5	-	-	10.344	MINOR
ENSMUSG00000064307	Lrrc51	ENSMUST00000106965	ENSMUSP00000102578	TRANSLATION	protein_coding	-	-	3	176	0	1.7	0	27.5	0	-4,-5	-	-	10.08	MINOR
ENSMUSG00000064307	Lrrc51	ENSMUST00000106963	ENSMUSP00000102576	TRANSLATION	protein_coding	-	CCDS52331.1	2	146	0	1.7	1.7	27.5	0	-4,-5	-	-	10.344	MINOR
ENSMUSG00000064307	Lrrc51	ENSMUST00000163903	ENSMUSP00000129333	TRANSLATION	protein_coding	-	CCDS52331.1	1	146	0	1.7	1.7	27.5	0	-4,-5	-	-	10.344	MINOR
ENSMUSG00000094606	Vmn2r50	ENSMUST00000086298	ENSMUSP00000083478	TRANSLATION	protein_coding	-	-	1	845	0	2.8	0.5	389.8	7	1,-4	-	-	11.442	ALTERNATIVE:2
ENSMUSG00000094606	Vmn2r50	ENSMUST00000074943	ENSMUSP00000074476	TRANSLATION	protein_coding	-	CCDS57492.1	5	861	0	3.08	0.5	388.1	7	1,-4	-	-	11.898	PRINCIPAL:2
ENSMUSG00000039361	Picalm	ENSMUST00000207225	ENSMUSP00000146659	TRANSLATION	protein_coding	-	CCDS85338.1	1	597	4	8.33	5.1	276.1	0	-4,-6	-	-	17.323	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000049537	ENSMUSP00000051092	TRANSLATION	protein_coding	-	CCDS85335.1	1	655	4	8.33	5.3	276.1	0	-4,-6	-	-	17.386	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000208742	ENSMUSP00000147016	TRANSLATION	protein_coding	-	CCDS85334.1	1	652	4	8.33	5.1	276.1	0	-4,-6	-	-	17.323	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000207949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039361	Picalm	ENSMUST00000208891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039361	Picalm	ENSMUST00000207197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039361	Picalm	ENSMUST00000207084	ENSMUSP00000146509	TRANSLATION	protein_coding	start	-	1	531	0	5.5	0	177.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000208089	ENSMUSP00000150861	TRANSLATION	protein_coding	start	-	5	404	0	2.25	0	47.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000207484	ENSMUSP00000146501	TRANSLATION	protein_coding	-	CCDS52307.1	1	660	4	8.33	6.3	276.1	0	-4,-6	-	-	17.71	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000208127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039361	Picalm	ENSMUST00000209068	ENSMUSP00000146386	TRANSLATION	protein_coding	-	CCDS85336.1	5	610	4	8.33	10.3	276.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000039361	Picalm	ENSMUST00000208684	ENSMUSP00000146408	TRANSLATION	protein_coding	stop	-	3	85	0	2.25	0	80.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000207596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039361	Picalm	ENSMUST00000208730	ENSMUSP00000146541	TRANSLATION	protein_coding	-	CCDS85337.1	1	605	4	8.33	6.3	276.1	0	-4,-6	-	-	17.71	MINOR
ENSMUSG00000039361	Picalm	ENSMUST00000207106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094905	Vmn1r155	ENSMUST00000177632	ENSMUSP00000136848	TRANSLATION	protein_coding	-	CCDS52117.1	-	307	0	0	1.5	55.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030595	Nfkbib	ENSMUST00000085851	ENSMUSP00000083012	TRANSLATION	protein_coding	-	CCDS21054.1	1	359	0	5.75	3.9	78.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030595	Nfkbib	ENSMUST00000032815	ENSMUSP00000032815	TRANSLATION	protein_coding	-	CCDS21054.1	1	359	0	5.75	3.9	78.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030595	Nfkbib	ENSMUST00000137121	ENSMUSP00000117769	TRANSLATION	protein_coding	stop	-	3	150	0	2.4	0	47	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000110259	Olfr65	ENSMUST00000214300	ENSMUSP00000150604	TRANSLATION	protein_coding	-	-	5	312	0	0.48	6.4	374.9	6	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000110259	Olfr65	ENSMUST00000209528	ENSMUSP00000147914	TRANSLATION	protein_coding	-	CCDS21596.1	-	315	0	0.48	6.4	374.9	6	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000110259	Olfr65	ENSMUST00000106864	ENSMUSP00000102477	TRANSLATION	protein_coding	-	-	5	312	0	0.48	6.4	374.9	6	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000031028	Tub	ENSMUST00000208442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031028	Tub	ENSMUST00000033341	ENSMUSP00000033341	TRANSLATION	protein_coding	-	CCDS21732.1	1	505	5	6	3.9	511.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031028	Tub	ENSMUST00000119474	ENSMUSP00000113580	TRANSLATION	protein_coding	-	-	1	459	5	6	1.2	463	0	-4,-2	-	-	14.159	MINOR
ENSMUSG00000031028	Tub	ENSMUST00000147943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031028	Tub	ENSMUST00000207583	ENSMUSP00000146894	TRANSLATION	protein_coding	stop	-	2	167	0	0	0	104.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000066513	Klk1b4	ENSMUST00000077354	ENSMUSP00000076576	TRANSLATION	protein_coding	-	CCDS21200.1	1	256	15	4.28	0.5	224.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000066378	Gm10160	ENSMUST00000085094	ENSMUSP00000082175	TRANSLATION	protein_coding	start/stop	-	5	67	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000030769	Slc5a11	ENSMUST00000131933	ENSMUSP00000121459	TRANSLATION	protein_coding	stop	-	5	402	0	7.262	0	365.8	12	-4,-7	-	-	-1	MINOR
ENSMUSG00000030769	Slc5a11	ENSMUST00000206180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030769	Slc5a11	ENSMUST00000131461	ENSMUSP00000123027	TRANSLATION	protein_coding	stop	-	3	64	0	0.4	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000030769	Slc5a11	ENSMUST00000127655	ENSMUSP00000117956	TRANSLATION	protein_coding	stop	-	3	152	0	2.85	0	101.3	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030769	Slc5a11	ENSMUST00000131209	ENSMUSP00000120678	TRANSLATION	protein_coding	start/stop	-	5	72	0	1.392	0	56.7	5	0,-4	-	-	-1	MINOR
ENSMUSG00000030769	Slc5a11	ENSMUST00000167299	ENSMUSP00000127977	TRANSLATION	protein_coding	-	CCDS21819.1	5	673	0	8.522	1.5	470.2	14	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030769	Slc5a11	ENSMUST00000033035	ENSMUSP00000033035	TRANSLATION	protein_coding	-	CCDS21819.1	1	673	0	8.522	1.5	470.2	14	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030769	Slc5a11	ENSMUST00000140721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038563	Efl1	ENSMUST00000207868	ENSMUSP00000146350	TRANSLATION	protein_coding	-	-	3	103	8	2.68	0	73.2	0	-4,-6	-	-	3.336	MINOR
ENSMUSG00000038563	Efl1	ENSMUST00000039881	ENSMUSP00000046046	TRANSLATION	protein_coding	-	CCDS21410.1	1	1127	12	18.58	2.7	303	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038563	Efl1	ENSMUST00000179489	ENSMUSP00000137061	TRANSLATION	protein_coding	-	CCDS21410.1	1	1127	12	18.58	2.7	303	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038563	Efl1	ENSMUST00000141726	ENSMUSP00000121909	TRANSLATION	protein_coding	stop	-	3	234	12	5.5	0	200.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038563	Efl1	ENSMUST00000125245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038563	Efl1	ENSMUST00000153265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096151	Olfr477	ENSMUST00000214677	ENSMUSP00000150605	TRANSLATION	protein_coding	-	CCDS21699.1	5	310	0	0.2	3.9	172	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000096151	Olfr477	ENSMUST00000091605	ENSMUSP00000091654	TRANSLATION	protein_coding	-	CCDS21699.1	-	310	0	0.2	3.9	172	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000025473	Adam8	ENSMUST00000156647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025473	Adam8	ENSMUST00000106069	ENSMUSP00000101684	TRANSLATION	protein_coding	-	CCDS21959.1	1	826	25	8.955	0.5	453.4	1	3,-2	-	-	17.25	PRINCIPAL:3
ENSMUSG00000025473	Adam8	ENSMUST00000026546	ENSMUSP00000026546	TRANSLATION	protein_coding	-	CCDS72064.1	1	825	25	8.955	0.5	453.4	1	3,-2	-	-	17.25	ALTERNATIVE:2
ENSMUSG00000025473	Adam8	ENSMUST00000132903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025473	Adam8	ENSMUST00000149915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025473	Adam8	ENSMUST00000173209	ENSMUSP00000133673	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025473	Adam8	ENSMUST00000148670	ENSMUSP00000117858	TRANSLATION	protein_coding	stop	-	1	744	25	9.219	0	457.1	1	3,-2	-	-	-1	MINOR
ENSMUSG00000025473	Adam8	ENSMUST00000128332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094085	Vmn1r114	ENSMUST00000098737	ENSMUSP00000096333	TRANSLATION	protein_coding	-	CCDS52082.1	-	321	0	0	0.5	57.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000073928	Olfr651	ENSMUST00000216246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073928	Olfr651	ENSMUST00000098176	ENSMUSP00000095778	TRANSLATION	protein_coding	-	CCDS21617.1	-	313	0	0.36	5.2	346.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073928	Olfr651	ENSMUST00000216904	ENSMUSP00000150776	TRANSLATION	protein_coding	-	CCDS21617.1	5	313	0	0.36	5.2	346.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000036957	Lrfn3	ENSMUST00000046351	ENSMUSP00000037616	TRANSLATION	protein_coding	-	CCDS21088.1	1	626	0	0.42	1.5	167.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094156	Sult2a7	ENSMUST00000209744	ENSMUSP00000147343	TRANSLATION	protein_coding	-	-	5	199	11	4.432	0	159.8	0	-4,-6	-	-	4.374	MINOR
ENSMUSG00000094156	Sult2a7	ENSMUST00000210034	ENSMUSP00000147959	TRANSLATION	protein_coding	-	-	5	166	11	3.132	0	141.4	0	-4,-6	-	-	0.672	MINOR
ENSMUSG00000094156	Sult2a7	ENSMUST00000211740	ENSMUSP00000147494	TRANSLATION	protein_coding	-	-	5	313	20	5.88	0	238.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000094156	Sult2a7	ENSMUST00000108524	ENSMUSP00000104164	TRANSLATION	protein_coding	-	CCDS57496.1	5	298	20	5.38	0.5	238.6	0	-4,-6	-	-	16.998	PRINCIPAL:2
ENSMUSG00000053720	Vmn2r43	ENSMUST00000066317	ENSMUSP00000069647	TRANSLATION	protein_coding	-	CCDS57484.1	1	845	0	2.8	0.5	392.6	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000040525	Cblc	ENSMUST00000108449	ENSMUSP00000104088	TRANSLATION	protein_coding	-	CCDS52064.1	1	452	7	6.35	0.5	393.9	0	-4,-1	-	-	9.138	MINOR
ENSMUSG00000040525	Cblc	ENSMUST00000043822	ENSMUSP00000039955	TRANSLATION	protein_coding	-	CCDS39804.1	1	496	14	7.35	1.5	430.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000040525	Cblc	ENSMUST00000131602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040525	Cblc	ENSMUST00000125050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040525	Cblc	ENSMUST00000131276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040525	Cblc	ENSMUST00000145755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040525	Cblc	ENSMUST00000148416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040017	Saa4	ENSMUST00000006952	ENSMUSP00000006952	TRANSLATION	protein_coding	-	CCDS21283.1	1	130	0	1.9	2.7	140.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037706	Cd81	ENSMUST00000141954	ENSMUSP00000147255	TRANSLATION	protein_coding	stop	-	3	121	0	3.75	0	89.4	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000037706	Cd81	ENSMUST00000128762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037706	Cd81	ENSMUST00000208278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037706	Cd81	ENSMUST00000132303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037706	Cd81	ENSMUST00000207448	ENSMUSP00000146533	TRANSLATION	protein_coding	stop	-	3	68	0	2.25	0	73.8	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000037706	Cd81	ENSMUST00000037941	ENSMUSP00000043768	TRANSLATION	protein_coding	-	CCDS22038.1	1	236	0	7.66	6.3	166.7	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095163	Vmn1r138	ENSMUST00000179206	ENSMUSP00000137285	TRANSLATION	protein_coding	-	CCDS52105.1	-	306	0	0	1.5	56.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025511	Tspan4	ENSMUST00000146305	ENSMUSP00000118533	TRANSLATION	protein_coding	stop	-	3	158	0	2.97	0	140.8	8	-1,-5	-	-	-1	MINOR
ENSMUSG00000025511	Tspan4	ENSMUST00000239217	ENSMUSP00000159235	TRANSLATION	protein_coding	-	-	-	333	0	3.495	0	189.5	10	-4,-6	-	-	12	MINOR
ENSMUSG00000025511	Tspan4	ENSMUST00000138092	ENSMUSP00000115421	TRANSLATION	protein_coding	stop	-	5	154	0	2.97	0	131.5	8	-1,-5	-	-	-1	MINOR
ENSMUSG00000025511	Tspan4	ENSMUST00000130402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025511	Tspan4	ENSMUST00000117634	ENSMUSP00000113085	TRANSLATION	protein_coding	-	CCDS22018.1	1	238	0	3.495	13.6	189.5	10	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025511	Tspan4	ENSMUST00000026585	ENSMUSP00000026585	TRANSLATION	protein_coding	-	CCDS22018.1	1	238	0	3.495	13.6	189.5	10	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025511	Tspan4	ENSMUST00000140858	ENSMUSP00000118936	TRANSLATION	protein_coding	stop	-	3	44	0	1.35	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000058244	Olfr506	ENSMUST00000209296	ENSMUSP00000147623	TRANSLATION	protein_coding	-	CCDS21720.1	3	314	0	0.28	1.5	181	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058244	Olfr506	ENSMUST00000077343	ENSMUSP00000076566	TRANSLATION	protein_coding	-	CCDS21720.1	-	314	0	0.28	1.5	181	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030612	Mrpl46	ENSMUST00000032841	ENSMUSP00000032841	TRANSLATION	protein_coding	-	CCDS21373.1	1	283	0	4	0.5	65.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000030612	Mrpl46	ENSMUST00000133949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030811	Fbxl19	ENSMUST00000188580	ENSMUSP00000140021	TRANSLATION	protein_coding	-	-	1	558	16	6.95	0	187.5	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000030811	Fbxl19	ENSMUST00000205689	ENSMUSP00000145793	TRANSLATION	protein_coding	stop	-	5	60	8	1	0	57.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030811	Fbxl19	ENSMUST00000186116	ENSMUSP00000140083	TRANSLATION	protein_coding	-	-	5	382	0	4.2	1.2	39.4	0	-4,-5	-	-	0.563	MINOR
ENSMUSG00000030811	Fbxl19	ENSMUST00000206893	ENSMUSP00000145616	TRANSLATION	protein_coding	-	-	5	631	16	6.95	2.4	187.5	0	-4,-7	-	-	18.452	ALTERNATIVE:2
ENSMUSG00000030811	Fbxl19	ENSMUST00000189562	ENSMUSP00000139972	TRANSLATION	protein_coding	stop	-	5	61	8	1	0	57.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030811	Fbxl19	ENSMUST00000186207	ENSMUSP00000140303	TRANSLATION	protein_coding	-	CCDS21877.1	1	674	16	6.95	4.1	187.5	0	-4,-7	-	-	19	PRINCIPAL:2
ENSMUSG00000030811	Fbxl19	ENSMUST00000033081	ENSMUSP00000033081	TRANSLATION	protein_coding	-	CCDS21877.1	1	674	16	6.95	4.1	187.5	0	-4,-7	-	-	19	PRINCIPAL:2
ENSMUSG00000066772	Obox3	ENSMUST00000086122	ENSMUSP00000083291	TRANSLATION	protein_coding	-	CCDS20838.1	5	335	0	1.5	0.5	58.4	0	-4,-5	-	-	11.292	PRINCIPAL:1
ENSMUSG00000066772	Obox3	ENSMUST00000174151	ENSMUSP00000133814	TRANSLATION	protein_coding	stop	-	1	192	0	1.7	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066772	Obox3	ENSMUST00000182148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066772	Obox3	ENSMUST00000173395	ENSMUSP00000133788	TRANSLATION	protein_coding	stop	-	5	213	0	1.5	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066772	Obox3	ENSMUST00000173912	ENSMUSP00000133427	TRANSLATION	protein_coding	-	CCDS20838.1	5	335	0	1.5	0.5	58.4	0	-4,-5	-	-	11.292	PRINCIPAL:1
ENSMUSG00000066772	Obox3	ENSMUST00000174443	ENSMUSP00000134531	TRANSLATION	protein_coding	-	CCDS20838.1	2	335	0	1.5	0.5	58.4	0	-4,-5	-	-	11.292	PRINCIPAL:1
ENSMUSG00000066772	Obox3	ENSMUST00000095217	ENSMUSP00000092842	TRANSLATION	protein_coding	-	CCDS20838.1	1	335	0	1.5	0.5	58.4	0	-4,-5	-	-	11.292	PRINCIPAL:1
ENSMUSG00000066772	Obox3	ENSMUST00000174842	ENSMUSP00000134526	TRANSLATION	protein_coding	stop	-	3	151	0	1.1	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073962	Olfr576	ENSMUST00000098213	ENSMUSP00000143172	TRANSLATION	protein_coding	-	CCDS80768.1	5	312	0	0.36	7.6	376.5	6	-4,-5	-	-	14.94	PRINCIPAL:1
ENSMUSG00000073962	Olfr576	ENSMUST00000185326	ENSMUSP00000142459	TRANSLATION	protein_coding	stop	-	5	309	0	0.36	4.9	377.5	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000186501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000190656	ENSMUSP00000141195	TRANSLATION	protein_coding	start	-	5	167	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000067386	ENSMUSP00000066803	TRANSLATION	protein_coding	-	CCDS21026.1	1	413	0	1.05	1.5	0	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000191126	ENSMUSP00000139696	TRANSLATION	protein_coding	stop	-	5	190	0	1.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000190903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000187032	ENSMUSP00000139423	TRANSLATION	protein_coding	-	-	1	391	0	1.05	0	0	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000187960	ENSMUSP00000140651	TRANSLATION	protein_coding	-	-	5	397	0	1.05	1.5	0	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000049643	2310022A10Rik	ENSMUST00000186826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073923	Olfr657	ENSMUST00000098171	ENSMUSP00000095773	TRANSLATION	protein_coding	-	CCDS21623.1	-	319	0	0.2	2.7	247.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073923	Olfr657	ENSMUST00000215454	ENSMUSP00000150070	TRANSLATION	protein_coding	-	CCDS21623.1	5	319	0	0.2	2.7	247.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073923	Olfr657	ENSMUST00000213297	ENSMUSP00000150620	TRANSLATION	protein_coding	-	CCDS21623.1	5	319	0	0.2	2.7	247.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036845	Lin37	ENSMUST00000043975	ENSMUSP00000048557	TRANSLATION	protein_coding	-	CCDS21098.1	1	246	0	0	6.3	160.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036845	Lin37	ENSMUST00000156241	ENSMUSP00000122248	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	103.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036845	Lin37	ENSMUST00000146548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036845	Lin37	ENSMUST00000149400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036845	Lin37	ENSMUST00000108164	ENSMUSP00000103799	TRANSLATION	protein_coding	-	CCDS71930.1	1	234	0	0	2.7	160.2	0	-4,-5	-	-	6.642	MINOR
ENSMUSG00000074365	Crxos	ENSMUST00000098801	ENSMUSP00000096399	TRANSLATION	protein_coding	-	CCDS20841.1	1	246	0	2.3	0.5	79.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074365	Crxos	ENSMUST00000125993	ENSMUSP00000139388	TRANSLATION	protein_coding	-	-	1	75	0	0.7	0	0	0	-4,-5	-	-	1.824	MINOR
ENSMUSG00000074365	Crxos	ENSMUST00000173808	ENSMUSP00000138891	TRANSLATION	nonsense_mediated_decay	start	-	1	50	0	0.5	0	39	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074365	Crxos	ENSMUST00000171280	ENSMUSP00000130485	TRANSLATION	protein_coding	-	CCDS57498.1	1	142	0	0.8	0.5	34.6	0	-4,-5	-	-	4.704	MINOR
ENSMUSG00000074365	Crxos	ENSMUST00000130566	ENSMUSP00000138909	TRANSLATION	protein_coding	stop	-	3	70	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074365	Crxos	ENSMUST00000150050	ENSMUSP00000133563	TRANSLATION	protein_coding	-	CCDS57497.1	1	120	0	1.5	1.5	44.7	0	-4,-5	-	-	7.296	MINOR
ENSMUSG00000092592	Gm20449	ENSMUST00000094532	ENSMUSP00000092110	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	39	0	0	0	0	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000006763	Saal1	ENSMUST00000209797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006763	Saal1	ENSMUST00000210791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006763	Saal1	ENSMUST00000143082	ENSMUSP00000120658	TRANSLATION	protein_coding	-	CCDS52253.1	1	474	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000006763	Saal1	ENSMUST00000210628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006763	Saal1	ENSMUST00000209780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043964	Orai3	ENSMUST00000061587	ENSMUSP00000050279	TRANSLATION	protein_coding	-	CCDS21878.1	1	290	0	2.5	1.5	226	3	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043964	Orai3	ENSMUST00000121504	ENSMUSP00000113142	TRANSLATION	protein_coding	-	-	1	136	0	0.8	0	43.6	0	-4,-5	-	-	1.92	MINOR
ENSMUSG00000043964	Orai3	ENSMUST00000118865	ENSMUSP00000112382	TRANSLATION	protein_coding	-	-	3	176	0	2.3	0	165	1	-4,-5	-	-	7.86	MINOR
ENSMUSG00000058028	Zscan5b	ENSMUST00000165445	ENSMUSP00000126044	TRANSLATION	protein_coding	-	CCDS20772.1	3	468	20	1.2	0.5	152.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000058028	Zscan5b	ENSMUST00000155314	ENSMUSP00000118508	TRANSLATION	protein_coding	stop	-	3	142	0	0.6	0	85	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058028	Zscan5b	ENSMUST00000072662	ENSMUSP00000072449	TRANSLATION	protein_coding	-	CCDS20772.1	1	468	20	1.2	0.5	152.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000074006	Omp	ENSMUST00000098281	ENSMUSP00000095882	TRANSLATION	protein_coding	-	CCDS21466.1	-	163	0	1	5.1	260.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060177	Klk1b22	ENSMUST00000077528	ENSMUSP00000076733	TRANSLATION	protein_coding	-	CCDS21196.1	1	259	7	4.3	0.5	234.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000005553	Atp4a	ENSMUST00000165410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005553	Atp4a	ENSMUST00000171014	ENSMUSP00000127209	TRANSLATION	nonsense_mediated_decay	start	-	3	32	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005553	Atp4a	ENSMUST00000005692	ENSMUSP00000005692	TRANSLATION	protein_coding	-	CCDS71932.1	5	1034	10	20.91	7.6	492.2	6	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005553	Atp4a	ENSMUST00000167761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005553	Atp4a	ENSMUST00000170371	ENSMUSP00000131964	TRANSLATION	protein_coding	-	CCDS52182.1	1	1025	10	20.58	0.5	492.2	6	-4,-5	-	-	17.34	MINOR
ENSMUSG00000089661	Mia	ENSMUST00000127491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089661	Mia	ENSMUST00000121848	ENSMUSP00000114063	TRANSLATION	protein_coding	-	-	1	131	0	3.13	2.7	41.1	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000089661	Mia	ENSMUST00000071986	ENSMUSP00000071876	TRANSLATION	protein_coding	-	CCDS21013.1	1	130	0	3.13	2.7	41.1	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000089661	Mia	ENSMUST00000205990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041560	Nop53	ENSMUST00000198688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041560	Nop53	ENSMUST00000197477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041560	Nop53	ENSMUST00000044158	ENSMUSP00000043981	TRANSLATION	protein_coding	-	CCDS39779.1	1	484	0	0	1.5	330.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041560	Nop53	ENSMUST00000200455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030562	Nox4	ENSMUST00000032781	ENSMUSP00000032781	TRANSLATION	protein_coding	-	CCDS21437.1	1	578	1	2.85	1.5	83.9	12	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000030562	Nox4	ENSMUST00000124057	ENSMUSP00000119365	TRANSLATION	protein_coding	stop	-	3	157	1	0	0	30.2	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000030562	Nox4	ENSMUST00000126887	ENSMUSP00000138336	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000030562	Nox4	ENSMUST00000127138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030562	Nox4	ENSMUST00000144267	ENSMUSP00000138143	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000030562	Nox4	ENSMUST00000136577	ENSMUSP00000138274	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000030562	Nox4	ENSMUST00000068829	ENSMUSP00000070039	TRANSLATION	protein_coding	-	-	1	592	1	2.15	0	83.9	12	0,-3	-	-	10.524	MINOR
ENSMUSG00000030562	Nox4	ENSMUST00000124269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030484	Lypd5	ENSMUST00000032683	ENSMUSP00000032683	TRANSLATION	protein_coding	-	CCDS39830.1	1	256	0	0	1.5	62.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000009487	Otog	ENSMUST00000164538	ENSMUSP00000130949	TRANSLATION	protein_coding	-	CCDS52251.1	5	2911	0	2.44	0.5	658.9	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000009487	Otog	ENSMUST00000209802	ENSMUSP00000147899	TRANSLATION	protein_coding	-	-	1	726	0	1.04	0	59	0	-4,-7	-	-	2.556	MINOR
ENSMUSG00000009487	Otog	ENSMUST00000210281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035632	Cnot3	ENSMUST00000038913	ENSMUSP00000039098	TRANSLATION	protein_coding	-	CCDS20721.1	1	751	0	4	6.3	455.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000035632	Cnot3	ENSMUST00000135977	ENSMUSP00000118822	TRANSLATION	nonsense_mediated_decay	start	-	5	103	0	0	0	102.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035632	Cnot3	ENSMUST00000143085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035632	Cnot3	ENSMUST00000132344	ENSMUSP00000117297	TRANSLATION	protein_coding	start/stop	-	5	340	0	0	0	245.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035632	Cnot3	ENSMUST00000129973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035632	Cnot3	ENSMUST00000206331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035632	Cnot3	ENSMUST00000160200	ENSMUSP00000124810	TRANSLATION	protein_coding	start	-	5	88	0	1.75	0	74.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035632	Cnot3	ENSMUST00000206287	ENSMUSP00000145641	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	168	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094748	Vmn1r255	ENSMUST00000174637	ENSMUSP00000134659	TRANSLATION	protein_coding	-	CCDS71909.1	-	307	0	0	1.5	54.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062142	Olfr569	ENSMUST00000217024	ENSMUSP00000149088	TRANSLATION	protein_coding	-	CCDS21550.1	5	314	0	0.16	4	377.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062142	Olfr569	ENSMUST00000078191	ENSMUSP00000077321	TRANSLATION	protein_coding	-	CCDS21550.1	-	314	0	0.16	4	377.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073896	Olfr716	ENSMUST00000098137	ENSMUSP00000095740	TRANSLATION	protein_coding	-	CCDS21687.1	-	314	0	1.26	5.1	192.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073896	Olfr716	ENSMUST00000215284	ENSMUSP00000150710	TRANSLATION	protein_coding	-	CCDS21687.1	5	314	0	1.26	5.1	192.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073896	Olfr716	ENSMUST00000213367	ENSMUSP00000150131	TRANSLATION	protein_coding	-	CCDS21687.1	5	314	0	1.26	5.1	192.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073896	Olfr716	ENSMUST00000210474	ENSMUSP00000147429	TRANSLATION	protein_coding	stop	-	3	169	0	0.9	0	96.7	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000073896	Olfr716	ENSMUST00000209942	ENSMUSP00000147403	TRANSLATION	protein_coding	stop	-	5	18	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073896	Olfr716	ENSMUST00000216871	ENSMUSP00000150175	TRANSLATION	protein_coding	-	CCDS21687.1	5	314	0	1.26	5.1	192.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000073896	Olfr716	ENSMUST00000214819	ENSMUSP00000149362	TRANSLATION	protein_coding	-	CCDS21687.1	5	314	0	1.26	5.1	192.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038644	Pold1	ENSMUST00000151793	ENSMUSP00000117157	TRANSLATION	nonsense_mediated_decay	-	-	5	981	20	15.94	0	702.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038644	Pold1	ENSMUST00000147503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038644	Pold1	ENSMUST00000049343	ENSMUSP00000039776	TRANSLATION	protein_coding	-	CCDS21210.1	1	1105	20	17.64	3.9	835.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000038644	Pold1	ENSMUST00000138746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038644	Pold1	ENSMUST00000145956	ENSMUSP00000117844	TRANSLATION	protein_coding	stop	-	5	153	0	0.96	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038644	Pold1	ENSMUST00000141742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038644	Pold1	ENSMUST00000154783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038644	Pold1	ENSMUST00000132268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038644	Pold1	ENSMUST00000136225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037020	Wdr62	ENSMUST00000133347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037020	Wdr62	ENSMUST00000152543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037020	Wdr62	ENSMUST00000145027	ENSMUSP00000116772	TRANSLATION	nonsense_mediated_decay	-	-	1	1076	0	8.84	0	70.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037020	Wdr62	ENSMUST00000108190	ENSMUSP00000103825	TRANSLATION	protein_coding	-	CCDS52178.1	1	1524	0	8.84	0.5	70.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037020	Wdr62	ENSMUST00000152234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037020	Wdr62	ENSMUST00000132483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037020	Wdr62	ENSMUST00000134570	ENSMUSP00000116139	TRANSLATION	protein_coding	start	-	1	1053	0	5.38	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003436	Dll3	ENSMUST00000108315	ENSMUSP00000103951	TRANSLATION	protein_coding	-	CCDS39856.1	1	585	10	4	5.1	115	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000003436	Dll3	ENSMUST00000145512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003436	Dll3	ENSMUST00000138721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030729	Pgm2l1	ENSMUST00000084935	ENSMUSP00000081998	TRANSLATION	protein_coding	-	CCDS40035.1	1	621	17	5.01	7.5	254.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030729	Pgm2l1	ENSMUST00000054436	ENSMUSP00000054782	TRANSLATION	nonsense_mediated_decay	-	-	2	621	17	5.01	7.5	254.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030729	Pgm2l1	ENSMUST00000162108	ENSMUSP00000124851	TRANSLATION	nonsense_mediated_decay	-	-	2	253	6	2.19	0	119	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030729	Pgm2l1	ENSMUST00000208158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062556	Scgb1b2	ENSMUST00000080635	ENSMUSP00000079468	TRANSLATION	protein_coding	-	CCDS39896.1	1	93	0	1.33	0.5	77.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000059319	Olfr295	ENSMUST00000078447	ENSMUSP00000077542	TRANSLATION	protein_coding	-	CCDS21432.1	-	309	0	0.2	1.5	157.8	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059319	Olfr295	ENSMUST00000215365	ENSMUSP00000150377	TRANSLATION	protein_coding	-	CCDS21432.1	3	309	0	0.2	1.5	157.8	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095543	Vmn1r148	ENSMUST00000177774	ENSMUSP00000136142	TRANSLATION	protein_coding	-	CCDS20925.1	-	307	0	0	1.5	53.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000003380	Rabac1	ENSMUST00000205771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003380	Rabac1	ENSMUST00000076961	ENSMUSP00000076227	TRANSLATION	protein_coding	-	CCDS20968.1	1	185	0	0	7.5	131.6	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000003380	Rabac1	ENSMUST00000206222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003380	Rabac1	ENSMUST00000206868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003380	Rabac1	ENSMUST00000206941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003380	Rabac1	ENSMUST00000205871	ENSMUSP00000146042	TRANSLATION	protein_coding	-	-	1	226	0	0	0	131.6	1	-4,-6	-	-	6	MINOR
ENSMUSG00000098022	Zfp82	ENSMUST00000183025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098022	Zfp82	ENSMUST00000080834	ENSMUSP00000079647	TRANSLATION	protein_coding	-	CCDS39876.1	5	530	51	1.6	1.5	315.3	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000098022	Zfp82	ENSMUST00000182483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098022	Zfp82	ENSMUST00000183115	ENSMUSP00000138677	TRANSLATION	protein_coding	stop	-	5	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098022	Zfp82	ENSMUST00000182919	ENSMUSP00000138642	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098022	Zfp82	ENSMUST00000183190	ENSMUSP00000138469	TRANSLATION	protein_coding	-	CCDS59724.1	1	83	0	1	0.5	78.2	0	-4,-6	-	-	3.75	MINOR
ENSMUSG00000098022	Zfp82	ENSMUST00000182546	ENSMUSP00000138217	TRANSLATION	protein_coding	-	CCDS59723.1	3	500	51	1.6	0.5	308.7	0	-4,-6	-	-	17.604	ALTERNATIVE:2
ENSMUSG00000053985	Zfp14	ENSMUST00000077787	ENSMUSP00000076960	TRANSLATION	protein_coding	-	CCDS39875.1	1	501	52	1.6	1.5	344.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053985	Zfp14	ENSMUST00000207873	ENSMUSP00000146824	TRANSLATION	protein_coding	-	CCDS39875.1	1	501	52	1.6	1.5	344.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053985	Zfp14	ENSMUST00000207072	ENSMUSP00000146913	TRANSLATION	protein_coding	-	CCDS39875.1	1	501	52	1.6	1.5	344.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032640	Chsy1	ENSMUST00000036372	ENSMUSP00000047487	TRANSLATION	protein_coding	-	CCDS39978.1	1	800	5	0	0.5	672	0	3,-4	-	-	11	PRINCIPAL:1
ENSMUSG00000030825	Hsd17b14	ENSMUST00000107752	ENSMUSP00000103381	TRANSLATION	protein_coding	-	CCDS21251.2	5	273	27	7.75	2.7	175.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030825	Hsd17b14	ENSMUST00000209745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030825	Hsd17b14	ENSMUST00000210997	ENSMUSP00000147851	TRANSLATION	nonsense_mediated_decay	start	-	1	68	9	2	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030825	Hsd17b14	ENSMUST00000209551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030825	Hsd17b14	ENSMUST00000209566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030825	Hsd17b14	ENSMUST00000211029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030825	Hsd17b14	ENSMUST00000210300	ENSMUSP00000147715	TRANSLATION	protein_coding	-	-	5	196	26	5.3	0	133.6	0	-4,-2	-	-	9.918	MINOR
ENSMUSG00000039257	Vstm2b	ENSMUST00000044705	ENSMUSP00000044002	TRANSLATION	protein_coding	-	CCDS21160.1	5	285	0	1.88	0.5	43.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000039257	Vstm2b	ENSMUST00000186352	ENSMUSP00000140241	TRANSLATION	protein_coding	start/stop	-	3	184	0	0.95	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000039257	Vstm2b	ENSMUST00000206223	ENSMUSP00000145703	TRANSLATION	protein_coding	stop	-	5	187	0	1.05	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000039257	Vstm2b	ENSMUST00000205845	ENSMUSP00000146231	TRANSLATION	protein_coding	-	CCDS21160.1	1	285	0	1.88	0.5	43.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000030671	Pde3b	ENSMUST00000210411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030671	Pde3b	ENSMUST00000140007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030671	Pde3b	ENSMUST00000149455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030671	Pde3b	ENSMUST00000032909	ENSMUSP00000032909	TRANSLATION	protein_coding	-	CCDS21760.1	1	1099	7	8.005	0.5	206.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006651	Aplp1	ENSMUST00000006828	ENSMUSP00000006828	TRANSLATION	protein_coding	-	CCDS21092.1	1	654	0	11.15	1.7	495.7	0	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000006651	Aplp1	ENSMUST00000208404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006651	Aplp1	ENSMUST00000207514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006651	Aplp1	ENSMUST00000208792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006651	Aplp1	ENSMUST00000209054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044952	Kctd21	ENSMUST00000054107	ENSMUSP00000051316	TRANSLATION	protein_coding	-	CCDS21456.1	1	260	0	0.4	14.8	73.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000206770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049580	Tsku	ENSMUST00000165901	ENSMUSP00000127242	TRANSLATION	protein_coding	-	CCDS21469.1	1	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000179780	ENSMUSP00000137437	TRANSLATION	protein_coding	-	CCDS21469.1	1	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000206414	ENSMUSP00000146025	TRANSLATION	protein_coding	-	CCDS21469.1	1	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000164726	ENSMUSP00000130917	TRANSLATION	protein_coding	-	CCDS21469.1	2	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000094161	ENSMUSP00000091713	TRANSLATION	protein_coding	-	CCDS21469.1	1	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000167405	ENSMUSP00000131789	TRANSLATION	protein_coding	-	CCDS21469.1	5	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049580	Tsku	ENSMUST00000165257	ENSMUSP00000128431	TRANSLATION	protein_coding	-	CCDS21469.1	2	354	0	0.48	0.5	85.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000063651	Cnfn	ENSMUST00000167591	ENSMUSP00000130957	TRANSLATION	protein_coding	-	CCDS52149.1	1	124	0	0	7.5	60.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000063651	Cnfn	ENSMUST00000076276	ENSMUSP00000075625	TRANSLATION	protein_coding	-	CCDS39838.1	1	111	0	0	4.1	60.8	0	-4,-6	-	-	7.431	MINOR
ENSMUSG00000037029	Zfp146	ENSMUST00000136508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037029	Zfp146	ENSMUST00000208923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037029	Zfp146	ENSMUST00000062181	ENSMUSP00000058588	TRANSLATION	protein_coding	-	CCDS21079.1	1	292	40	0.8	7.5	241.3	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000095190	Gm10668	ENSMUST00000191073	ENSMUSP00000140440	TRANSLATION	protein_coding	-	-	1	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095190	Gm10668	ENSMUST00000179491	ENSMUSP00000137013	TRANSLATION	protein_coding	-	-	-	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073898	Olfr713	ENSMUST00000213623	ENSMUSP00000150042	TRANSLATION	protein_coding	-	-	5	317	0	0.42	7.5	192.2	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073898	Olfr713	ENSMUST00000098139	ENSMUSP00000095743	TRANSLATION	protein_coding	-	CCDS21684.1	-	324	0	0.42	1.7	192.2	6	-4,-5	-	-	12.324	MINOR
ENSMUSG00000100586	Vmn1r90	ENSMUST00000185220	ENSMUSP00000140455	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000227855	ENSMUSP00000153726	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000227566	ENSMUSP00000154440	TRANSLATION	protein_coding	-	-	-	302	0	0	0	44.8	7	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000226802	ENSMUSP00000154071	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000227692	ENSMUSP00000154752	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000227788	ENSMUSP00000154247	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000100586	Vmn1r90	ENSMUST00000226981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100586	Vmn1r90	ENSMUST00000226510	ENSMUSP00000154700	TRANSLATION	protein_coding	-	-	-	227	0	0	0	40.2	6	-4,-7	-	-	5.382	MINOR
ENSMUSG00000100586	Vmn1r90	ENSMUST00000226264	ENSMUSP00000153986	TRANSLATION	protein_coding	-	CCDS59703.1	-	309	0	0	0.5	44.8	7	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000062116	Zfp954	ENSMUST00000210142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062116	Zfp954	ENSMUST00000056246	ENSMUSP00000072585	TRANSLATION	protein_coding	-	CCDS51991.1	1	416	32	0.6	1.5	236.6	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040498	Igsf23	ENSMUST00000208210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040498	Igsf23	ENSMUST00000207513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040498	Igsf23	ENSMUST00000043440	ENSMUSP00000047914	TRANSLATION	protein_coding	-	CCDS52065.1	1	239	0	0.4	0.5	0	1	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000040498	Igsf23	ENSMUST00000208974	ENSMUSP00000147077	TRANSLATION	protein_coding	-	-	1	201	0	0.4	0	0	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030922	Lyrm1	ENSMUST00000207680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030922	Lyrm1	ENSMUST00000106517	ENSMUSP00000102127	TRANSLATION	protein_coding	-	CCDS21790.1	1	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000208424	ENSMUSP00000146841	TRANSLATION	protein_coding	-	CCDS21790.1	1	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000106516	ENSMUSP00000102126	TRANSLATION	protein_coding	-	CCDS21790.1	1	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000106518	ENSMUSP00000102128	TRANSLATION	protein_coding	-	CCDS21790.1	3	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000054440	ENSMUSP00000051616	TRANSLATION	protein_coding	-	CCDS21790.1	5	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000208411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030922	Lyrm1	ENSMUST00000208202	ENSMUSP00000146699	TRANSLATION	protein_coding	-	CCDS21790.1	5	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000030922	Lyrm1	ENSMUST00000207270	ENSMUSP00000146648	TRANSLATION	protein_coding	-	CCDS21790.1	1	122	0	0	9.5	48.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000073970	Olfr555	ENSMUST00000098220	ENSMUSP00000095823	TRANSLATION	protein_coding	-	CCDS21540.1	-	315	0	0.24	5.1	417.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000055489	Ano5	ENSMUST00000207044	ENSMUSP00000147243	TRANSLATION	protein_coding	-	-	1	772	0	2.96	0	701.7	5	-4,-5	-	-	8.286	MINOR
ENSMUSG00000055489	Ano5	ENSMUST00000207717	ENSMUSP00000146783	TRANSLATION	protein_coding	-	CCDS85311.1	1	854	0	2.36	0.5	676.1	6	-4,-5	-	-	5.532	MINOR
ENSMUSG00000055489	Ano5	ENSMUST00000043944	ENSMUSP00000046884	TRANSLATION	protein_coding	-	CCDS39968.1	1	904	0	2.96	0.5	763.6	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091002	Tcerg1l	ENSMUST00000162222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091002	Tcerg1l	ENSMUST00000160436	ENSMUSP00000124476	TRANSLATION	protein_coding	-	CCDS40167.2	5	590	0	5.2	0.5	77.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000091002	Tcerg1l	ENSMUST00000161213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041309	Nkx6-2	ENSMUST00000097974	ENSMUSP00000095588	TRANSLATION	nonsense_mediated_decay	-	-	1	277	0	1.2	7.5	74.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041309	Nkx6-2	ENSMUST00000106095	ENSMUSP00000101701	TRANSLATION	protein_coding	-	CCDS40170.1	1	277	0	1.2	7.5	74.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078793	Gm5155	ENSMUST00000072381	ENSMUSP00000156991	TRANSLATION	protein_coding	-	-	-	1067	0	3.6	0.5	230.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000005442	Cic	ENSMUST00000169743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005442	Cic	ENSMUST00000005578	ENSMUSP00000005578	TRANSLATION	protein_coding	-	-	5	1604	0	1.32	0.5	61.7	0	-4,-1	-	-	7.812	MINOR
ENSMUSG00000005442	Cic	ENSMUST00000163819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005442	Cic	ENSMUST00000163320	ENSMUSP00000126659	TRANSLATION	protein_coding	-	CCDS52146.1	1	1604	0	1.32	1.5	61.7	0	-4,-1	-	-	7.812	MINOR
ENSMUSG00000005442	Cic	ENSMUST00000163901	ENSMUSP00000127858	TRANSLATION	protein_coding	start	-	3	150	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005442	Cic	ENSMUST00000169266	ENSMUSP00000132351	TRANSLATION	protein_coding	-	CCDS80678.1	1	2510	0	1.32	0.5	131.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005442	Cic	ENSMUST00000164440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005442	Cic	ENSMUST00000165239	ENSMUSP00000128071	TRANSLATION	protein_coding	stop	-	5	1153	0	1.32	0	61.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005442	Cic	ENSMUST00000167162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005442	Cic	ENSMUST00000168956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005442	Cic	ENSMUST00000165742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005442	Cic	ENSMUST00000170500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005442	Cic	ENSMUST00000167379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005442	Cic	ENSMUST00000169392	ENSMUSP00000131680	TRANSLATION	protein_coding	stop	-	2	142	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005442	Cic	ENSMUST00000164820	ENSMUSP00000130146	TRANSLATION	protein_coding	start	-	3	75	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037606	Osbpl5	ENSMUST00000137627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037606	Osbpl5	ENSMUST00000149736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037606	Osbpl5	ENSMUST00000119499	ENSMUSP00000113362	TRANSLATION	protein_coding	-	CCDS57598.1	1	874	0	8.98	1.5	340.3	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000037606	Osbpl5	ENSMUST00000020411	ENSMUSP00000020411	TRANSLATION	protein_coding	-	CCDS40200.1	1	898	0	8.98	1.5	340.3	1	-4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000037606	Osbpl5	ENSMUST00000134056	ENSMUSP00000115141	TRANSLATION	protein_coding	stop	-	3	199	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037606	Osbpl5	ENSMUST00000153864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037606	Osbpl5	ENSMUST00000140502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066500	Izumo2	ENSMUST00000085422	ENSMUSP00000082543	TRANSLATION	protein_coding	-	CCDS52235.1	1	193	0	0	0.5	106.8	1	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000066500	Izumo2	ENSMUST00000209004	ENSMUSP00000146467	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	48.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000066500	Izumo2	ENSMUST00000207182	ENSMUSP00000146985	TRANSLATION	protein_coding	start	-	3	143	0	0	0	78.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000070570	Slc17a7	ENSMUST00000209634	ENSMUSP00000147661	TRANSLATION	protein_coding	-	-	5	585	0	0	0	165.2	8	-4,-7	-	-	6	MINOR
ENSMUSG00000070570	Slc17a7	ENSMUST00000210498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070570	Slc17a7	ENSMUST00000210540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070570	Slc17a7	ENSMUST00000085374	ENSMUSP00000082489	TRANSLATION	protein_coding	-	CCDS52244.1	1	560	0	0	7.5	161.9	8	-4,-7	-	-	8.802	PRINCIPAL:1
ENSMUSG00000070570	Slc17a7	ENSMUST00000211652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004328	Hif3a	ENSMUST00000108492	ENSMUSP00000104132	TRANSLATION	protein_coding	-	CCDS52045.1	1	664	0	8.53	0.5	167.9	0	-4,0	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000004328	Hif3a	ENSMUST00000139224	ENSMUSP00000146258	TRANSLATION	protein_coding	start	-	3	76	0	2	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004328	Hif3a	ENSMUST00000153833	ENSMUSP00000117728	TRANSLATION	protein_coding	stop	-	3	152	0	2.166	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000004328	Hif3a	ENSMUST00000037762	ENSMUSP00000048248	TRANSLATION	protein_coding	-	CCDS20860.1	1	662	0	8.662	1.5	167.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000056216	Cebpg	ENSMUST00000130491	ENSMUSP00000118588	TRANSLATION	protein_coding	-	CCDS21144.1	1	150	0	0.6	13.6	56.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000056216	Cebpg	ENSMUST00000205752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056216	Cebpg	ENSMUST00000206505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056216	Cebpg	ENSMUST00000070191	ENSMUSP00000064963	TRANSLATION	protein_coding	-	CCDS21144.1	2	150	0	0.6	13.6	56.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000000154	Slc22a18	ENSMUST00000150791	ENSMUSP00000123047	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000000154	Slc22a18	ENSMUST00000141988	ENSMUSP00000120434	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000000154	Slc22a18	ENSMUST00000052348	ENSMUSP00000056082	TRANSLATION	protein_coding	-	CCDS22041.1	1	410	0	0	0.5	105.2	11	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000000154	Slc22a18	ENSMUST00000145943	ENSMUSP00000115345	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	2	-3,-4	-	-	-1	MINOR
ENSMUSG00000000154	Slc22a18	ENSMUST00000105917	ENSMUSP00000101537	TRANSLATION	protein_coding	-	CCDS22041.1	1	410	0	0	0.5	105.2	11	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000093536	Smim17	ENSMUST00000161855	ENSMUSP00000130202	TRANSLATION	protein_coding	-	CCDS51990.1	3	109	0	0	1.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000093536	Smim17	ENSMUST00000159318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093536	Smim17	ENSMUST00000160218	ENSMUSP00000126877	TRANSLATION	protein_coding	-	CCDS51990.1	1	109	0	0	1.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000109951	Olfr601	ENSMUST00000210431	ENSMUSP00000147592	TRANSLATION	protein_coding	-	CCDS21570.1	3	314	0	0.2	4	337.2	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000109951	Olfr601	ENSMUST00000214110	ENSMUSP00000151190	TRANSLATION	protein_coding	-	CCDS21570.1	5	314	0	0.2	4	337.2	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000109951	Olfr601	ENSMUST00000080474	ENSMUSP00000079328	TRANSLATION	protein_coding	-	CCDS21570.1	-	314	0	0.2	4	337.2	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000109951	Olfr601	ENSMUST00000217416	ENSMUSP00000150751	TRANSLATION	protein_coding	-	CCDS21570.1	5	314	0	0.2	4	337.2	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000048377	Foxi2	ENSMUST00000238917	ENSMUSP00000159111	TRANSLATION	protein_coding	-	CCDS21942.1	-	329	0	0.84	0.5	130.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000048377	Foxi2	ENSMUST00000060356	ENSMUSP00000053641	TRANSLATION	protein_coding	-	-	1	311	0	0.84	0	130.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030897	Cnga4	ENSMUST00000210344	ENSMUSP00000147387	TRANSLATION	protein_coding	-	-	1	472	16	2.5	0.5	202.6	2	2,-2	-	-	12.558	MINOR
ENSMUSG00000030897	Cnga4	ENSMUST00000033187	ENSMUSP00000033187	TRANSLATION	protein_coding	-	CCDS21650.1	1	575	16	4.35	5.1	231.6	3	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000047085	Lrrc4b	ENSMUST00000156093	ENSMUSP00000119374	TRANSLATION	protein_coding	stop	-	2	234	0	2.5	0	129.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000047085	Lrrc4b	ENSMUST00000058667	ENSMUSP00000053123	TRANSLATION	protein_coding	-	CCDS21206.1	1	709	2	3.5	1.5	228.1	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000047085	Lrrc4b	ENSMUST00000127790	ENSMUSP00000123389	TRANSLATION	protein_coding	stop	-	5	218	0	2	0	127.8	0	0,-3	-	-	-1	MINOR
ENSMUSG00000078808	Vmn1r58	ENSMUST00000226315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078808	Vmn1r58	ENSMUST00000108569	ENSMUSP00000104209	TRANSLATION	protein_coding	-	CCDS39747.1	1	310	0	0	0.5	66.1	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000078808	Vmn1r58	ENSMUST00000228728	ENSMUSP00000154393	TRANSLATION	protein_coding	-	CCDS39747.1	-	310	0	0	0.5	66.1	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000078808	Vmn1r58	ENSMUST00000227549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101520	Scgb1b12	ENSMUST00000188355	ENSMUSP00000139594	TRANSLATION	protein_coding	-	CCDS80698.1	3	93	0	1.33	0.5	73.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031004	Mki67	ENSMUST00000033310	ENSMUSP00000033310	TRANSLATION	protein_coding	-	CCDS52421.1	5	3177	0	4.6	0.5	1925.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031004	Mki67	ENSMUST00000211238	ENSMUSP00000147271	TRANSLATION	protein_coding	start/stop	-	3	192	0	1.85	0	66	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041420	Meis3	ENSMUST00000002495	ENSMUSP00000002495	TRANSLATION	protein_coding	-	CCDS39782.1	1	378	0	2.25	3.9	222.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000041420	Meis3	ENSMUST00000175946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041420	Meis3	ENSMUST00000176446	ENSMUSP00000134855	TRANSLATION	nonsense_mediated_decay	start	-	5	84	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041420	Meis3	ENSMUST00000183527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041420	Meis3	ENSMUST00000176714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041420	Meis3	ENSMUST00000177156	ENSMUSP00000135103	TRANSLATION	nonsense_mediated_decay	-	-	1	313	0	1.75	0	189.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041420	Meis3	ENSMUST00000176506	ENSMUSP00000134918	TRANSLATION	protein_coding	-	CCDS71892.1	1	361	0	2.25	2.7	147.9	0	-4,-5	-	-	8.104	MINOR
ENSMUSG00000041420	Meis3	ENSMUST00000176342	ENSMUSP00000135302	TRANSLATION	protein_coding	stop	-	3	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041420	Meis3	ENSMUST00000177540	ENSMUSP00000135388	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	72.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000118462	AC151602.1	ENSMUST00000238581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118462	AC151602.1	ENSMUST00000238591	ENSMUSP00000158785	TRANSLATION	nonsense_mediated_decay	-	-	-	310	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000118462	AC151602.1	ENSMUST00000238638	ENSMUSP00000158821	TRANSLATION	protein_coding	-	-	-	310	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000118462	AC151602.1	ENSMUST00000238437	ENSMUSP00000158793	TRANSLATION	nonsense_mediated_decay	start	-	-	205	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062598	Vmn1r178	ENSMUST00000227993	ENSMUSP00000154244	TRANSLATION	protein_coding	-	CCDS20935.1	-	304	0	0	0.5	62.2	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062598	Vmn1r178	ENSMUST00000226640	ENSMUSP00000154374	TRANSLATION	protein_coding	-	-	-	231	0	0	0	49.4	5	-4,-2	-	-	4.764	MINOR
ENSMUSG00000062598	Vmn1r178	ENSMUST00000226450	ENSMUSP00000154764	TRANSLATION	protein_coding	-	CCDS20935.1	-	304	0	0	0.5	62.2	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062598	Vmn1r178	ENSMUST00000226489	ENSMUSP00000153763	TRANSLATION	protein_coding	-	-	-	231	0	0	0	49.4	5	-4,-2	-	-	4.764	MINOR
ENSMUSG00000062598	Vmn1r178	ENSMUST00000078593	ENSMUSP00000077666	TRANSLATION	protein_coding	-	CCDS20935.1	-	304	0	0	0.5	62.2	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000107482	Etfbl	ENSMUST00000203633	ENSMUSP00000145061	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	221	20	4.46	0	155.7	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000107482	Etfbl	ENSMUST00000204680	ENSMUSP00000145493	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	168	19	3.46	0	104.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000062785	Kcnc3	ENSMUST00000209177	ENSMUSP00000146535	TRANSLATION	protein_coding	-	-	5	768	0	1.2	1.5	263	4	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000062785	Kcnc3	ENSMUST00000208412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062785	Kcnc3	ENSMUST00000207493	ENSMUSP00000146425	TRANSLATION	protein_coding	-	-	5	730	0	1.2	1.5	263	4	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000062785	Kcnc3	ENSMUST00000207497	ENSMUSP00000146479	TRANSLATION	nonsense_mediated_decay	start	-	3	157	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062785	Kcnc3	ENSMUST00000107906	ENSMUSP00000103539	TRANSLATION	protein_coding	-	-	1	770	0	1.2	1.5	263	4	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000062785	Kcnc3	ENSMUST00000107907	ENSMUSP00000103540	TRANSLATION	protein_coding	-	CCDS39942.1	5	769	0	1.2	1.5	263	4	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000062785	Kcnc3	ENSMUST00000208651	ENSMUSP00000146988	TRANSLATION	protein_coding	-	-	5	729	0	1.2	1.5	263	4	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000030879	Mrpl17	ENSMUST00000176887	ENSMUSP00000134784	TRANSLATION	protein_coding	stop	-	2	111	0	2.035	0	44.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030879	Mrpl17	ENSMUST00000176498	ENSMUSP00000148082	TRANSLATION	protein_coding	start	-	3	122	0	2.08	0	45.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030879	Mrpl17	ENSMUST00000124482	ENSMUSP00000117971	TRANSLATION	protein_coding	-	CCDS21662.1	1	176	0	3.41	6.3	90.3	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000030879	Mrpl17	ENSMUST00000176158	ENSMUSP00000135121	TRANSLATION	nonsense_mediated_decay	start	-	3	109	0	1.75	0	44.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030879	Mrpl17	ENSMUST00000033170	ENSMUSP00000147523	TRANSLATION	protein_coding	-	-	1	116	0	2.08	0	44.5	0	-4,0	-	-	6.3	MINOR
ENSMUSG00000000214	Th	ENSMUST00000123057	ENSMUSP00000122162	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	1	0	51.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000214	Th	ENSMUST00000105929	ENSMUSP00000101549	TRANSLATION	protein_coding	-	-	1	403	15	9.448	0	592	0	-4,-5	-	-	8.304	MINOR
ENSMUSG00000000214	Th	ENSMUST00000138482	ENSMUSP00000123661	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	1.58	0	62.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000214	Th	ENSMUST00000140344	ENSMUSP00000115434	TRANSLATION	protein_coding	stop	-	3	171	0	3.448	0	56.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000214	Th	ENSMUST00000124951	ENSMUSP00000122876	TRANSLATION	nonsense_mediated_decay	-	-	5	232	0	5.5	0	185	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000214	Th	ENSMUST00000000219	ENSMUSP00000000219	TRANSLATION	protein_coding	-	CCDS22036.1	1	498	15	11.75	3.9	676.9	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000048012	Zfp473	ENSMUST00000060270	ENSMUSP00000051069	TRANSLATION	protein_coding	-	CCDS21213.1	1	892	73	0.2	0.5	286.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000048012	Zfp473	ENSMUST00000126366	ENSMUSP00000127101	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048012	Zfp473	ENSMUST00000118162	ENSMUSP00000113316	TRANSLATION	protein_coding	-	CCDS71952.1	1	891	73	0.2	0.5	286.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048012	Zfp473	ENSMUST00000120798	ENSMUSP00000113789	TRANSLATION	protein_coding	-	CCDS71952.1	1	891	73	0.2	0.5	286.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048012	Zfp473	ENSMUST00000149011	ENSMUSP00000130689	TRANSLATION	protein_coding	-	-	1	103	0	0	0	30.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048012	Zfp473	ENSMUST00000140599	ENSMUSP00000127738	TRANSLATION	protein_coding	stop	-	2	149	0	0	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048012	Zfp473	ENSMUST00000120074	ENSMUSP00000113774	TRANSLATION	protein_coding	-	CCDS21213.1	1	892	73	0.2	0.5	286.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030592	Ryr1	ENSMUST00000208922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030592	Ryr1	ENSMUST00000208010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030592	Ryr1	ENSMUST00000179893	ENSMUSP00000137123	TRANSLATION	protein_coding	-	CCDS39866.1	5	5035	0	86.005	0.5	1878.5	0	-4,-5	-	-	11.37	PRINCIPAL:2
ENSMUSG00000030592	Ryr1	ENSMUST00000208318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030592	Ryr1	ENSMUST00000207764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030592	Ryr1	ENSMUST00000214374	ENSMUSP00000149042	TRANSLATION	protein_coding	-	-	5	5061	0	86.005	0.5	1889	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030592	Ryr1	ENSMUST00000032813	ENSMUSP00000032813	TRANSLATION	protein_coding	-	-	5	5033	0	86.005	0	1878.5	0	-4,-5	-	-	11.37	ALTERNATIVE:2
ENSMUSG00000030592	Ryr1	ENSMUST00000207783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000159305	ENSMUSP00000125098	TRANSLATION	protein_coding	start/stop	-	3	102	0	1.5	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000005610	Eif4g2	ENSMUST00000163014	ENSMUSP00000123811	TRANSLATION	protein_coding	start	-	2	158	0	2	0	45.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000005610	Eif4g2	ENSMUST00000160966	ENSMUSP00000125301	TRANSLATION	protein_coding	start/stop	-	2	29	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000005610	Eif4g2	ENSMUST00000162394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000161682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000160552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000159465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000161736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000161158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005610	Eif4g2	ENSMUST00000160132	ENSMUSP00000124914	TRANSLATION	protein_coding	start/stop	-	5	161	0	3	0	64.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000005610	Eif4g2	ENSMUST00000161079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005610	Eif4g2	ENSMUST00000161051	ENSMUSP00000125375	TRANSLATION	protein_coding	start	-	1	868	0	13.85	0.5	325.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000005610	Eif4g2	ENSMUST00000161790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005610	Eif4g2	ENSMUST00000162415	ENSMUSP00000124551	TRANSLATION	protein_coding	start	-	1	906	0	13.85	1.5	325.9	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000090714	Zscan4d	ENSMUST00000067210	ENSMUSP00000066504	TRANSLATION	protein_coding	-	CCDS52013.1	1	506	15	0.2	0.5	113.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030678	Maz	ENSMUST00000206254	ENSMUSP00000145610	TRANSLATION	protein_coding	-	-	5	454	26	1.99	1.2	66.3	0	-4,-5	-	-	12.887	MINOR
ENSMUSG00000030678	Maz	ENSMUST00000205568	ENSMUSP00000145619	TRANSLATION	protein_coding	-	-	5	493	31	1.99	4.1	95.7	0	-2,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000030678	Maz	ENSMUST00000206291	ENSMUSP00000146267	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030678	Maz	ENSMUST00000032916	ENSMUSP00000032916	TRANSLATION	protein_coding	-	CCDS40137.1	1	477	26	1.99	2.7	66.3	0	-2,-3	-	-	13.37	MINOR
ENSMUSG00000030678	Maz	ENSMUST00000205461	ENSMUSP00000145984	TRANSLATION	protein_coding	-	-	5	172	8	0.64	1.2	0	0	-2,-4	-	-	1.997	MINOR
ENSMUSG00000030678	Maz	ENSMUST00000206953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074218	Cox7a1	ENSMUST00000208441	ENSMUSP00000146960	TRANSLATION	protein_coding	-	-	2	89	0	2	0	37.3	1	-4,-2	-	-	12	MINOR
ENSMUSG00000074218	Cox7a1	ENSMUST00000098594	ENSMUSP00000096193	TRANSLATION	protein_coding	-	CCDS21081.1	1	80	0	2	11.3	37.3	1	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000085601	Gm4969	ENSMUST00000127433	ENSMUSP00000115597	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000085601	Gm4969	ENSMUST00000141380	ENSMUSP00000115575	TRANSLATION	protein_coding	-	-	5	566	0	0	0.5	36.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000035582	Gdpd4	ENSMUST00000170049	ENSMUSP00000131960	TRANSLATION	protein_coding	-	CCDS52318.1	5	632	5	2.51	0.5	63.2	6	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000035582	Gdpd4	ENSMUST00000041860	ENSMUSP00000036772	TRANSLATION	protein_coding	-	CCDS52318.1	1	632	5	2.51	0.5	63.2	6	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000055200	Sertad3	ENSMUST00000068641	ENSMUSP00000068187	TRANSLATION	protein_coding	-	CCDS21021.1	1	197	0	0	7.5	51.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000003099	Ppp5c	ENSMUST00000156366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003099	Ppp5c	ENSMUST00000138353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003099	Ppp5c	ENSMUST00000142831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003099	Ppp5c	ENSMUST00000003183	ENSMUSP00000003183	TRANSLATION	protein_coding	-	CCDS20859.1	1	499	10	11.75	6.3	266.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003099	Ppp5c	ENSMUST00000146920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003099	Ppp5c	ENSMUST00000145997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003099	Ppp5c	ENSMUST00000124573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003099	Ppp5c	ENSMUST00000127311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003099	Ppp5c	ENSMUST00000142597	ENSMUSP00000122783	TRANSLATION	protein_coding	start	-	5	476	10	11	2.4	244.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003099	Ppp5c	ENSMUST00000153242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003099	Ppp5c	ENSMUST00000154880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043866	Taf10	ENSMUST00000131683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043866	Taf10	ENSMUST00000054556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043866	Taf10	ENSMUST00000146999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043866	Taf10	ENSMUST00000141116	ENSMUSP00000118105	TRANSLATION	protein_coding	-	CCDS21660.1	1	218	0	3.3	7.5	91.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042502	Cd2bp2	ENSMUST00000205355	ENSMUSP00000145634	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042502	Cd2bp2	ENSMUST00000035771	ENSMUSP00000044790	TRANSLATION	protein_coding	-	CCDS21859.1	1	342	0	2	5.1	65.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042502	Cd2bp2	ENSMUST00000205525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042502	Cd2bp2	ENSMUST00000206587	ENSMUSP00000145779	TRANSLATION	protein_coding	stop	-	2	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042502	Cd2bp2	ENSMUST00000206081	ENSMUSP00000146087	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042502	Cd2bp2	ENSMUST00000205321	ENSMUSP00000145549	TRANSLATION	protein_coding	stop	-	2	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042502	Cd2bp2	ENSMUST00000166791	ENSMUSP00000132963	TRANSLATION	protein_coding	-	CCDS21859.1	1	342	0	2	5.1	65.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042502	Cd2bp2	ENSMUST00000205316	ENSMUSP00000145888	TRANSLATION	protein_coding	-	CCDS21859.1	1	342	0	2	5.1	65.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042502	Cd2bp2	ENSMUST00000206026	ENSMUSP00000146167	TRANSLATION	protein_coding	-	CCDS21859.1	1	342	0	2	5.1	65.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031022	BC051019	ENSMUST00000145211	ENSMUSP00000115006	TRANSLATION	protein_coding	stop	-	2	168	0	0	0	33.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031022	BC051019	ENSMUST00000106735	ENSMUSP00000102346	TRANSLATION	protein_coding	-	CCDS40084.1	1	402	0	0	0.5	129.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031022	BC051019	ENSMUST00000033334	ENSMUSP00000033334	TRANSLATION	protein_coding	-	CCDS40084.1	1	402	0	0	0.5	129.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035674	Ndufa3	ENSMUST00000076657	ENSMUSP00000075953	TRANSLATION	protein_coding	-	CCDS39728.1	1	84	0	2.514	5.3	159.9	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000035674	Ndufa3	ENSMUST00000156712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035674	Ndufa3	ENSMUST00000148403	ENSMUSP00000116988	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035674	Ndufa3	ENSMUST00000150497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035674	Ndufa3	ENSMUST00000108644	ENSMUSP00000104284	TRANSLATION	protein_coding	-	-	3	100	0	2.264	0	145.4	2	-4,-7	-	-	10.536	MINOR
ENSMUSG00000035674	Ndufa3	ENSMUST00000134683	ENSMUSP00000116828	TRANSLATION	nonsense_mediated_decay	start	-	3	42	0	0.75	0	38.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000052040	Klf13	ENSMUST00000183817	ENSMUSP00000139049	TRANSLATION	protein_coding	-	-	1	82	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000052040	Klf13	ENSMUST00000183907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052040	Klf13	ENSMUST00000185175	ENSMUSP00000140381	TRANSLATION	protein_coding	-	-	2	52	2	0.47	0	0	0	-4,-1	-	-	1.686	MINOR
ENSMUSG00000052040	Klf13	ENSMUST00000063694	ENSMUSP00000067680	TRANSLATION	protein_coding	-	CCDS21331.1	1	289	12	1.67	0.5	64.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073916	Olfr669	ENSMUST00000214260	ENSMUSP00000150928	TRANSLATION	protein_coding	-	CCDS21632.1	5	317	0	0	4	342	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000073916	Olfr669	ENSMUST00000098164	ENSMUSP00000095767	TRANSLATION	protein_coding	-	CCDS21632.1	-	317	0	0	4	342	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000073916	Olfr669	ENSMUST00000210138	ENSMUSP00000147742	TRANSLATION	protein_coding	-	CCDS21632.1	3	317	0	0	4	342	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000030847	Bag3	ENSMUST00000033136	ENSMUSP00000033136	TRANSLATION	protein_coding	-	CCDS21898.1	1	577	0	1.8	0.5	103.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030500	Slc17a6	ENSMUST00000207945	ENSMUSP00000146364	TRANSLATION	nonsense_mediated_decay	-	-	1	202	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030500	Slc17a6	ENSMUST00000207375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030500	Slc17a6	ENSMUST00000208597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030500	Slc17a6	ENSMUST00000032710	ENSMUSP00000032710	TRANSLATION	protein_coding	-	CCDS39969.1	1	582	0	0	14.8	161.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000094879	Vmn1r129	ENSMUST00000165961	ENSMUSP00000128469	TRANSLATION	protein_coding	-	CCDS52097.1	-	307	0	0	1.5	56.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000029461	Fam168a	ENSMUST00000208406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029461	Fam168a	ENSMUST00000207078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029461	Fam168a	ENSMUST00000207875	ENSMUSP00000146851	TRANSLATION	protein_coding	-	CCDS21505.1	1	235	0	0	19.5	365.2	0	-4,-5	-	-	9.58	PRINCIPAL:1
ENSMUSG00000029461	Fam168a	ENSMUST00000207564	ENSMUSP00000147113	TRANSLATION	protein_coding	-	-	5	129	0	0	1.2	140	0	-4,-5	-	-	0.044	MINOR
ENSMUSG00000029461	Fam168a	ENSMUST00000209084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000029461	Fam168a	ENSMUST00000216021	ENSMUSP00000149345	TRANSLATION	protein_coding	-	CCDS21505.1	5	235	0	0	19.5	365.2	0	-4,-5	-	-	9.58	PRINCIPAL:1
ENSMUSG00000029461	Fam168a	ENSMUST00000049053	ENSMUSP00000038233	TRANSLATION	protein_coding	-	CCDS21505.1	1	235	0	0	19.5	365.2	0	-4,-5	-	-	9.58	PRINCIPAL:1
ENSMUSG00000029461	Fam168a	ENSMUST00000208013	ENSMUSP00000146839	TRANSLATION	protein_coding	-	-	5	260	0	0	0	362	0	-4,-5	-	-	5.388	MINOR
ENSMUSG00000029461	Fam168a	ENSMUST00000208387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029461	Fam168a	ENSMUST00000107042	ENSMUSP00000102657	TRANSLATION	protein_coding	-	-	1	244	0	0	8.8	372.2	0	-4,-5	-	-	7.688	MINOR
ENSMUSG00000030738	Eif3c	ENSMUST00000180459	ENSMUSP00000138023	TRANSLATION	protein_coding	stop	-	2	249	0	5.43	0	237.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030738	Eif3c	ENSMUST00000205949	ENSMUSP00000146083	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0.6	0	25.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030738	Eif3c	ENSMUST00000032992	ENSMUSP00000032992	TRANSLATION	protein_coding	-	CCDS21832.1	1	911	0	18.01	7.5	947	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073953	Olfr596	ENSMUST00000104880	ENSMUSP00000100475	TRANSLATION	protein_coding	-	CCDS52335.1	-	312	0	0.36	6.4	401.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073953	Olfr596	ENSMUST00000214577	ENSMUSP00000149187	TRANSLATION	protein_coding	-	CCDS52335.1	5	312	0	0.36	6.4	401.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048920	Fkrp	ENSMUST00000205368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048920	Fkrp	ENSMUST00000205677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048920	Fkrp	ENSMUST00000206259	ENSMUSP00000145701	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	2	0,-3	-	-	-1	MINOR
ENSMUSG00000048920	Fkrp	ENSMUST00000061390	ENSMUSP00000059091	TRANSLATION	protein_coding	-	CCDS20853.1	1	494	0	0	8.8	0	2	0,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000096513	Vmn1r247	ENSMUST00000172863	ENSMUSP00000134084	TRANSLATION	protein_coding	-	CCDS71903.1	-	314	0	0	0.5	59.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000051527	Usp29	ENSMUST00000207899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051527	Usp29	ENSMUST00000208642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051527	Usp29	ENSMUST00000054055	ENSMUSP00000062349	TRANSLATION	protein_coding	-	CCDS20784.1	-	869	4	0.64	0.5	285.1	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000051527	Usp29	ENSMUST00000197117	ENSMUSP00000143283	TRANSLATION	protein_coding	stop	-	1	198	0	0.48	0	119.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000051527	Usp29	ENSMUST00000208662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051527	Usp29	ENSMUST00000208952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051527	Usp29	ENSMUST00000198068	ENSMUSP00000143267	TRANSLATION	protein_coding	-	CCDS20784.1	5	869	4	0.64	0.5	285.1	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000051527	Usp29	ENSMUST00000208195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051527	Usp29	ENSMUST00000200535	ENSMUSP00000143769	TRANSLATION	protein_coding	-	CCDS20784.1	5	869	4	0.64	0.5	285.1	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000094680	Vmn1r121	ENSMUST00000105197	ENSMUSP00000100832	TRANSLATION	protein_coding	-	CCDS52089.1	-	314	0	0	0.5	59.3	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000011267	Zfp296	ENSMUST00000108453	ENSMUSP00000104093	TRANSLATION	protein_coding	-	CCDS52060.1	1	445	16	0.24	0.5	66.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000011267	Zfp296	ENSMUST00000208314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058818	Pirb	ENSMUST00000136238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058818	Pirb	ENSMUST00000078451	ENSMUSP00000077546	TRANSLATION	protein_coding	-	CCDS39730.1	1	841	0	6.1	0.5	100.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058818	Pirb	ENSMUST00000155131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058818	Pirb	ENSMUST00000129493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058818	Pirb	ENSMUST00000137474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013668	4933402N03Rik	ENSMUST00000070980	ENSMUSP00000070291	TRANSLATION	protein_coding	-	CCDS40156.1	1	329	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056394	Lig1	ENSMUST00000177588	ENSMUSP00000136972	TRANSLATION	protein_coding	-	-	5	932	16	17.58	0.5	444.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000056394	Lig1	ENSMUST00000185145	ENSMUSP00000138907	TRANSLATION	protein_coding	stop	-	5	313	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056394	Lig1	ENSMUST00000156525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056394	Lig1	ENSMUST00000146998	ENSMUSP00000121102	TRANSLATION	protein_coding	stop	-	5	270	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056394	Lig1	ENSMUST00000131294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056394	Lig1	ENSMUST00000123025	ENSMUSP00000114872	TRANSLATION	protein_coding	stop	-	3	225	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056394	Lig1	ENSMUST00000148471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056394	Lig1	ENSMUST00000147735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056394	Lig1	ENSMUST00000098814	ENSMUSP00000096411	TRANSLATION	protein_coding	-	-	5	932	16	17.58	0.5	444.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000056394	Lig1	ENSMUST00000138453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056394	Lig1	ENSMUST00000123846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056394	Lig1	ENSMUST00000165964	ENSMUSP00000126525	TRANSLATION	protein_coding	-	-	5	932	16	17.58	0.5	444.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070369	Itgad	ENSMUST00000176249	ENSMUSP00000135309	TRANSLATION	protein_coding	start	-	2	96	0	0.95	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000070369	Itgad	ENSMUST00000106237	ENSMUSP00000101844	TRANSLATION	protein_coding	-	-	1	1168	24	24.66	0	331.3	2	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000070369	Itgad	ENSMUST00000033051	ENSMUSP00000033051	TRANSLATION	protein_coding	-	CCDS21890.2	1	1202	24	24.66	0.5	310.5	2	4,-1	-	-	16.752	MINOR
ENSMUSG00000070369	Itgad	ENSMUST00000177111	ENSMUSP00000135572	TRANSLATION	protein_coding	-	-	5	1166	24	24.66	0.5	331.3	2	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000070369	Itgad	ENSMUST00000177383	ENSMUSP00000135104	TRANSLATION	protein_coding	start	-	3	107	0	1.2	0	25.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000007833	Aldh16a1	ENSMUST00000209581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007833	Aldh16a1	ENSMUST00000209963	ENSMUSP00000148069	TRANSLATION	protein_coding	-	CCDS21231.1	1	802	2	7.69	3.9	378.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000007833	Aldh16a1	ENSMUST00000107815	ENSMUSP00000103445	TRANSLATION	protein_coding	-	-	1	754	2	7.69	0	374.8	0	-4,-5	-	-	13.772	MINOR
ENSMUSG00000007833	Aldh16a1	ENSMUST00000209755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007833	Aldh16a1	ENSMUST00000209957	ENSMUSP00000147268	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000007833	Aldh16a1	ENSMUST00000210125	ENSMUSP00000147622	TRANSLATION	protein_coding	start	-	5	115	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000007833	Aldh16a1	ENSMUST00000210539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007833	Aldh16a1	ENSMUST00000211169	ENSMUSP00000148006	TRANSLATION	protein_coding	start	-	3	112	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000007833	Aldh16a1	ENSMUST00000209889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007833	Aldh16a1	ENSMUST00000210352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007833	Aldh16a1	ENSMUST00000210725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007833	Aldh16a1	ENSMUST00000211362	ENSMUSP00000147810	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030493	Faap24	ENSMUST00000154597	ENSMUSP00000115766	TRANSLATION	protein_coding	-	CCDS21149.1	3	221	0	4	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030493	Faap24	ENSMUST00000141001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030493	Faap24	ENSMUST00000032704	ENSMUSP00000032704	TRANSLATION	protein_coding	-	CCDS21149.1	1	221	0	4	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030849	Fgfr2	ENSMUST00000130557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000117073	ENSMUSP00000112672	TRANSLATION	protein_coding	start	-	1	695	18	13.58	0	444.9	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000117089	ENSMUSP00000112992	TRANSLATION	protein_coding	start	-	1	820	18	16.38	2.4	475.7	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000136264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000153166	ENSMUSP00000120100	TRANSLATION	nonsense_mediated_decay	-	-	1	334	0	5.88	0	89.5	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000117691	ENSMUSP00000113180	TRANSLATION	protein_coding	start	-	1	822	18	16.38	2.4	475.7	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000121080	ENSMUSP00000112585	TRANSLATION	protein_coding	start	-	1	698	18	13.58	0	441	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000121064	ENSMUSP00000113452	TRANSLATION	protein_coding	start	-	1	609	18	12.28	0	387.9	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000118296	ENSMUSP00000112471	TRANSLATION	protein_coding	start	-	1	724	18	14.18	0	441	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000129103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000122054	ENSMUSP00000112430	TRANSLATION	protein_coding	-	CCDS52413.1	1	840	18	16.68	6.4	479.6	4	-1,-5	-	-	20.19	PRINCIPAL:1
ENSMUSG00000030849	Fgfr2	ENSMUST00000117872	ENSMUSP00000113994	TRANSLATION	protein_coding	-	CCDS85431.1	1	723	18	15.08	8.4	444.9	4	-1,0	-	-	15.72	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000117357	ENSMUSP00000112580	TRANSLATION	protein_coding	start	-	1	705	18	14.78	0	441	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000148675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000120715	ENSMUSP00000113474	TRANSLATION	protein_coding	start	-	5	709	18	14.38	1.2	436.7	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000120141	ENSMUSP00000113415	TRANSLATION	protein_coding	start	-	1	731	18	15.38	0	441	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000208844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000120187	ENSMUSP00000113248	TRANSLATION	protein_coding	-	CCDS52412.1	1	726	18	15.08	7.6	441	4	-1,0	-	-	15.162	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000117754	ENSMUSP00000113187	TRANSLATION	protein_coding	start	-	1	608	18	12.28	0	391.8	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000122448	ENSMUSP00000113993	TRANSLATION	protein_coding	start	-	1	696	18	13.58	0	441	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000129542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000117858	ENSMUSP00000112623	TRANSLATION	protein_coding	start	-	1	813	18	15.18	0	475.7	4	3,-2	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000133806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000124096	ENSMUSP00000130971	TRANSLATION	protein_coding	-	-	5	182	1	4.7	0	170.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000147859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030849	Fgfr2	ENSMUST00000127091	ENSMUSP00000122856	TRANSLATION	nonsense_mediated_decay	start	-	2	61	0	1.1	0	26.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030849	Fgfr2	ENSMUST00000119260	ENSMUSP00000113010	TRANSLATION	protein_coding	start	-	1	819	18	16.38	1.2	479.6	4	3,-2	-	-	-1	MINOR
ENSMUSG00000019738	Polr2i	ENSMUST00000138118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019738	Polr2i	ENSMUST00000150841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019738	Polr2i	ENSMUST00000019882	ENSMUSP00000019882	TRANSLATION	protein_coding	-	CCDS21084.1	1	125	13	4	11	106.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000019738	Polr2i	ENSMUST00000138886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019738	Polr2i	ENSMUST00000108192	ENSMUSP00000103827	TRANSLATION	protein_coding	-	-	2	103	9	3.25	0	82.6	0	-4,-5	-	-	12.384	MINOR
ENSMUSG00000019738	Polr2i	ENSMUST00000108193	ENSMUSP00000103828	TRANSLATION	protein_coding	-	-	3	123	5	1.55	0	37.6	0	-4,-5	-	-	3.612	MINOR
ENSMUSG00000019738	Polr2i	ENSMUST00000149654	ENSMUSP00000116741	TRANSLATION	protein_coding	stop	-	5	83	6	2.5	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019738	Polr2i	ENSMUST00000145559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073971	Olfr554	ENSMUST00000098221	ENSMUSP00000095824	TRANSLATION	protein_coding	-	CCDS21539.1	-	317	0	0.2	4	357.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073971	Olfr554	ENSMUST00000214841	ENSMUSP00000150312	TRANSLATION	protein_coding	-	CCDS21539.1	5	317	0	0.2	4	357.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073971	Olfr554	ENSMUST00000215995	ENSMUSP00000150338	TRANSLATION	protein_coding	-	CCDS21539.1	5	317	0	0.2	4	357.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000002603	Tgfb1	ENSMUST00000206348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002603	Tgfb1	ENSMUST00000002678	ENSMUSP00000002678	TRANSLATION	protein_coding	-	CCDS20993.1	1	390	0	6.75	2.7	210.8	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002603	Tgfb1	ENSMUST00000171757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002603	Tgfb1	ENSMUST00000206584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002603	Tgfb1	ENSMUST00000169009	ENSMUSP00000130413	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094119	Olfr612	ENSMUST00000104879	ENSMUSP00000100473	TRANSLATION	protein_coding	-	CCDS52337.1	-	323	0	0	1.5	364.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094119	Olfr612	ENSMUST00000215663	ENSMUSP00000150524	TRANSLATION	protein_coding	-	CCDS52337.1	5	323	0	0	1.5	364.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094119	Olfr612	ENSMUST00000214269	ENSMUSP00000149996	TRANSLATION	protein_coding	-	CCDS52337.1	5	323	0	0	1.5	364.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072259	Gm5592	ENSMUST00000206490	ENSMUSP00000145899	TRANSLATION	protein_coding	-	-	5	857	0	0	0.5	187.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072259	Gm5592	ENSMUST00000097044	ENSMUSP00000094809	TRANSLATION	protein_coding	-	CCDS52209.1	1	857	0	0	0.5	187.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061099	Gapdhs	ENSMUST00000182067	ENSMUSP00000138697	TRANSLATION	nonsense_mediated_decay	start	-	3	67	6	1.14	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061099	Gapdhs	ENSMUST00000074758	ENSMUSP00000074317	TRANSLATION	protein_coding	-	CCDS21109.1	5	438	24	9.69	0.5	357.6	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000061099	Gapdhs	ENSMUST00000182634	ENSMUSP00000138634	TRANSLATION	protein_coding	-	CCDS71933.1	1	440	24	9.69	0.5	357.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000037049	Smpd1	ENSMUST00000211307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037049	Smpd1	ENSMUST00000046983	ENSMUSP00000042187	TRANSLATION	protein_coding	-	CCDS21653.1	1	627	8	5.55	2.7	73.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037049	Smpd1	ENSMUST00000210934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095936	Zscan4e	ENSMUST00000166753	ENSMUSP00000147491	TRANSLATION	protein_coding	-	-	5	505	15	0.4	0.5	110.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095936	Zscan4e	ENSMUST00000210521	ENSMUSP00000147356	TRANSLATION	protein_coding	-	-	5	505	15	0.4	0.5	110.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078080	Olfr585	ENSMUST00000104881	ENSMUSP00000100476	TRANSLATION	protein_coding	-	CCDS40053.1	-	318	0	0.36	5.1	362.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000008140	Emc10	ENSMUST00000118515	ENSMUSP00000113141	TRANSLATION	protein_coding	-	-	1	254	0	0	0	0	0	3,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000008140	Emc10	ENSMUST00000123928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008140	Emc10	ENSMUST00000118808	ENSMUSP00000113509	TRANSLATION	protein_coding	-	-	1	258	0	0	0	0	0	3,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000008140	Emc10	ENSMUST00000150342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008140	Emc10	ENSMUST00000138328	ENSMUSP00000116293	TRANSLATION	protein_coding	stop	-	5	214	0	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000008140	Emc10	ENSMUST00000239015	ENSMUSP00000159045	TRANSLATION	protein_coding	-	CCDS52231.1	-	268	0	0	0.5	0	0	1,2	-	-	0	PRINCIPAL:2
ENSMUSG00000008140	Emc10	ENSMUST00000147102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061286	Exosc5	ENSMUST00000079634	ENSMUSP00000078580	TRANSLATION	protein_coding	-	CCDS20990.1	1	235	0	6.25	1.5	112.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061286	Exosc5	ENSMUST00000206561	ENSMUSP00000145948	TRANSLATION	protein_coding	-	CCDS20990.1	1	235	0	6.25	1.5	112.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061286	Exosc5	ENSMUST00000205743	ENSMUSP00000146157	TRANSLATION	nonsense_mediated_decay	-	-	3	84	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061286	Exosc5	ENSMUST00000205614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061286	Exosc5	ENSMUST00000205275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061286	Exosc5	ENSMUST00000205966	ENSMUSP00000145921	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	2	0	34.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044362	Ccdc89	ENSMUST00000061391	ENSMUSP00000060309	TRANSLATION	protein_coding	-	CCDS52308.1	-	370	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074358	Ccdc61	ENSMUST00000206499	ENSMUSP00000146309	TRANSLATION	protein_coding	start	-	3	264	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074358	Ccdc61	ENSMUST00000139077	ENSMUSP00000123625	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074358	Ccdc61	ENSMUST00000150065	ENSMUSP00000122950	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074358	Ccdc61	ENSMUST00000206037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074358	Ccdc61	ENSMUST00000135467	ENSMUSP00000118644	TRANSLATION	nonsense_mediated_decay	-	-	1	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074358	Ccdc61	ENSMUST00000098780	ENSMUSP00000096377	TRANSLATION	protein_coding	-	CCDS39791.1	1	511	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074358	Ccdc61	ENSMUST00000206595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074358	Ccdc61	ENSMUST00000133506	ENSMUSP00000123152	TRANSLATION	nonsense_mediated_decay	start	-	3	66	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003872	Lin7b	ENSMUST00000209226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003872	Lin7b	ENSMUST00000003971	ENSMUSP00000003971	TRANSLATION	protein_coding	-	CCDS21239.1	1	207	3	5.35	14.2	134.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000003872	Lin7b	ENSMUST00000210216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003872	Lin7b	ENSMUST00000210865	ENSMUSP00000147294	TRANSLATION	nonsense_mediated_decay	start	-	5	52	2	1.73	0	41	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003872	Lin7b	ENSMUST00000211416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003872	Lin7b	ENSMUST00000209756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090215	Trim34b	ENSMUST00000106847	ENSMUSP00000102460	TRANSLATION	protein_coding	-	CCDS57570.1	1	485	16	4.994	1.5	99.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000090215	Trim34b	ENSMUST00000180136	ENSMUSP00000136926	TRANSLATION	protein_coding	-	-	5	485	16	4.73	0	99.1	0	-4,-5	-	-	17.472	ALTERNATIVE:2
ENSMUSG00000008496	Pou2f2	ENSMUST00000175774	ENSMUSP00000135075	TRANSLATION	protein_coding	-	CCDS52143.1	1	463	0	4	3.9	189.4	0	-4,-5	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000008496	Pou2f2	ENSMUST00000108418	ENSMUSP00000104056	TRANSLATION	protein_coding	-	CCDS52144.1	1	583	0	4	0.5	189.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000008496	Pou2f2	ENSMUST00000108416	ENSMUSP00000104054	TRANSLATION	protein_coding	-	-	1	424	0	4	1	189.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000008496	Pou2f2	ENSMUST00000175754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008496	Pou2f2	ENSMUST00000108417	ENSMUSP00000104055	TRANSLATION	protein_coding	-	CCDS52145.1	1	485	0	4	3.9	189.4	0	-4,-5	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000008496	Pou2f2	ENSMUST00000147146	ENSMUSP00000118307	TRANSLATION	protein_coding	start/stop	-	5	203	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000008496	Pou2f2	ENSMUST00000108413	ENSMUSP00000104051	TRANSLATION	protein_coding	-	-	1	400	0	4	1.2	189.4	0	-4,-5	-	-	12.098	MINOR
ENSMUSG00000008496	Pou2f2	ENSMUST00000176408	ENSMUSP00000135326	TRANSLATION	protein_coding	-	-	5	467	0	4	2.4	189.4	0	-4,-5	-	-	12.682	MINOR
ENSMUSG00000008496	Pou2f2	ENSMUST00000108415	ENSMUSP00000104053	TRANSLATION	protein_coding	-	CCDS39834.1	1	479	0	4	5.1	189.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000008496	Pou2f2	ENSMUST00000098679	ENSMUSP00000096276	TRANSLATION	protein_coding	-	-	1	549	0	4	0.5	189.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000003420	Fcgrt	ENSMUST00000210642	ENSMUSP00000147496	TRANSLATION	protein_coding	-	-	1	369	0	6.23	0.5	241.5	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000003420	Fcgrt	ENSMUST00000211085	ENSMUSP00000147969	TRANSLATION	protein_coding	stop	-	5	154	0	3.25	0	140.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003420	Fcgrt	ENSMUST00000209830	ENSMUSP00000147757	TRANSLATION	protein_coding	stop	-	1	36	0	1.25	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003420	Fcgrt	ENSMUST00000003512	ENSMUSP00000003512	TRANSLATION	protein_coding	-	CCDS52243.1	1	365	0	6.23	0.5	235.7	1	4,-1	-	-	11.652	PRINCIPAL:2
ENSMUSG00000003420	Fcgrt	ENSMUST00000211668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003420	Fcgrt	ENSMUST00000211535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000172529	ENSMUSP00000133932	TRANSLATION	protein_coding	-	-	5	456	0	8.83	7.8	206.1	0	-4,-5	-	-	11.166	MINOR
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000173750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174548	ENSMUSP00000133728	TRANSLATION	protein_coding	-	CCDS39864.2	5	586	0	10.08	6.3	228.3	0	-4,-1	-	-	14.337	PRINCIPAL:1
ENSMUSG00000015165	Hnrnpl	ENSMUST00000173578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174882	ENSMUSP00000133952	TRANSLATION	nonsense_mediated_decay	start	-	5	201	0	4.38	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015165	Hnrnpl	ENSMUST00000173818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015165	Hnrnpl	ENSMUST00000174477	ENSMUSP00000134734	TRANSLATION	protein_coding	start	-	1	615	0	10.08	0	228.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015165	Hnrnpl	ENSMUST00000172884	ENSMUSP00000134271	TRANSLATION	protein_coding	stop	-	5	112	0	2.08	0	21.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015165	Hnrnpl	ENSMUST00000038572	ENSMUSP00000049407	TRANSLATION	protein_coding	-	CCDS39864.2	1	586	0	10.08	6.3	228.3	0	-4,-1	-	-	14.337	PRINCIPAL:1
ENSMUSG00000015165	Hnrnpl	ENSMUST00000172841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031016	Wee1	ENSMUST00000033326	ENSMUSP00000033326	TRANSLATION	protein_coding	-	CCDS21743.1	1	646	18	7.31	2.7	203.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000049674	Olfr714	ENSMUST00000214429	ENSMUSP00000151106	TRANSLATION	protein_coding	-	CCDS40077.1	5	317	0	0.42	7.5	187.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049674	Olfr714	ENSMUST00000214123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049674	Olfr714	ENSMUST00000054629	ENSMUSP00000095742	TRANSLATION	protein_coding	-	CCDS40077.1	-	317	0	0.42	7.5	187.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000070436	Serpinh1	ENSMUST00000207989	ENSMUSP00000146444	TRANSLATION	protein_coding	stop	-	2	115	0	1.8	0	49.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000070436	Serpinh1	ENSMUST00000208292	ENSMUSP00000146373	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000070436	Serpinh1	ENSMUST00000208749	ENSMUSP00000146515	TRANSLATION	protein_coding	stop	-	5	203	0	2.8	0	123.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000070436	Serpinh1	ENSMUST00000169437	ENSMUSP00000126390	TRANSLATION	protein_coding	-	CCDS21480.1	1	417	0	5.8	2.7	321.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070436	Serpinh1	ENSMUST00000094154	ENSMUSP00000091706	TRANSLATION	protein_coding	-	CCDS21480.1	1	417	0	5.8	2.7	321.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070436	Serpinh1	ENSMUST00000208119	ENSMUSP00000146969	TRANSLATION	protein_coding	-	CCDS21480.1	1	417	0	5.8	2.7	321.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070436	Serpinh1	ENSMUST00000207849	ENSMUSP00000147064	TRANSLATION	protein_coding	-	CCDS21480.1	1	417	0	5.8	2.7	321.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000058631	Vmn1r63	ENSMUST00000075085	ENSMUSP00000074593	TRANSLATION	protein_coding	-	CCDS20765.1	1	300	0	0	0.5	58.1	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000051687	Vmn1r73	ENSMUST00000226516	ENSMUSP00000153827	TRANSLATION	protein_coding	-	CCDS20800.1	-	303	0	0	0.5	91.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051687	Vmn1r73	ENSMUST00000055070	ENSMUSP00000055353	TRANSLATION	protein_coding	-	CCDS20800.1	-	303	0	0	0.5	91.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045165	AI467606	ENSMUST00000056288	ENSMUSP00000063016	TRANSLATION	protein_coding	-	CCDS21857.1	1	225	0	0	3.9	382.4	1	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000045165	AI467606	ENSMUST00000206102	ENSMUSP00000146315	TRANSLATION	protein_coding	-	CCDS21857.1	5	225	0	0	3.9	382.4	1	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000070568	Slc6a21	ENSMUST00000210207	ENSMUSP00000147902	TRANSLATION	protein_coding	start	-	1	322	0	3.35	0	149.1	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000070568	Slc6a21	ENSMUST00000209477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070568	Slc6a21	ENSMUST00000210733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070568	Slc6a21	ENSMUST00000209886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070568	Slc6a21	ENSMUST00000085364	ENSMUSP00000082476	TRANSLATION	protein_coding	-	CCDS21238.1	1	423	0	2.34	0.5	120.1	8	3,-2	-	-	0	MINOR
ENSMUSG00000070568	Slc6a21	ENSMUST00000210861	ENSMUSP00000147890	TRANSLATION	protein_coding	-	-	5	748	0	6.64	0.5	339.5	15	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030373	Psg28	ENSMUST00000019291	ENSMUSP00000019291	TRANSLATION	protein_coding	-	CCDS20870.1	1	472	0	2.76	0.5	158.7	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000109060	Gm4513	ENSMUST00000207881	ENSMUSP00000147065	TRANSLATION	protein_coding	-	CCDS85227.1	1	301	16	1	0.5	238.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040268	Plekha1	ENSMUST00000135359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000075181	ENSMUSP00000074675	TRANSLATION	protein_coding	-	CCDS85434.1	1	383	10	7.984	6.6	108	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000040268	Plekha1	ENSMUST00000146111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000120441	ENSMUSP00000112777	TRANSLATION	protein_coding	-	-	5	334	10	7.984	3.9	108	0	-4,-5	-	-	19.036	ALTERNATIVE:2
ENSMUSG00000040268	Plekha1	ENSMUST00000140153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000148513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000136963	ENSMUSP00000146948	TRANSLATION	nonsense_mediated_decay	start	-	3	71	8	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040268	Plekha1	ENSMUST00000149029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000151119	ENSMUSP00000123600	TRANSLATION	protein_coding	-	-	1	316	10	7.634	0	108	0	-4,-5	-	-	17.298	MINOR
ENSMUSG00000040268	Plekha1	ENSMUST00000048180	ENSMUSP00000035375	TRANSLATION	protein_coding	-	CCDS21907.1	1	356	10	6.234	1.7	67.4	0	-4,-5	-	-	12.316	MINOR
ENSMUSG00000040268	Plekha1	ENSMUST00000154282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040268	Plekha1	ENSMUST00000126355	ENSMUSP00000114411	TRANSLATION	protein_coding	start	-	3	155	1	2.43	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000151451	ENSMUSP00000116990	TRANSLATION	protein_coding	stop	-	2	214	0	5.41	0	135.7	0	-2,2	-	-	-1	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000124533	ENSMUSP00000146115	TRANSLATION	protein_coding	-	-	3	365	21	9.74	0	172.6	0	-2,2	-	-	7.944	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000206068	ENSMUSP00000146249	TRANSLATION	protein_coding	start	-	5	180	30	3	0	31	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000071056	ENSMUSP00000070345	TRANSLATION	protein_coding	-	CCDS21884.1	1	412	30	11.24	3.5	190.2	0	-2,2	-	-	19	PRINCIPAL:1
ENSMUSG00000030802	Bckdk	ENSMUST00000206745	ENSMUSP00000145617	TRANSLATION	protein_coding	-	-	5	335	22	8.74	0	141.6	0	-2,2	-	-	4.752	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000206140	ENSMUSP00000146303	TRANSLATION	protein_coding	stop	-	5	216	0	5.41	0	113.3	0	-2,2	-	-	-1	MINOR
ENSMUSG00000030802	Bckdk	ENSMUST00000146574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013091	Tmem190	ENSMUST00000206395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013091	Tmem190	ENSMUST00000013235	ENSMUSP00000013235	TRANSLATION	protein_coding	-	CCDS51976.1	1	166	0	0	0.5	222.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045282	Tmem86b	ENSMUST00000055085	ENSMUSP00000060237	TRANSLATION	protein_coding	-	CCDS20739.1	1	226	0	0	3.9	130.8	7	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000045282	Tmem86b	ENSMUST00000206610	ENSMUSP00000145838	TRANSLATION	protein_coding	-	-	3	97	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045282	Tmem86b	ENSMUST00000205402	ENSMUSP00000145569	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	59	0	1,-2	-	-	-1	MINOR
ENSMUSG00000045282	Tmem86b	ENSMUST00000205360	ENSMUSP00000146201	TRANSLATION	protein_coding	-	-	2	221	0	0	0	130.8	7	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000051618	Ubqln3	ENSMUST00000057254	ENSMUSP00000055229	TRANSLATION	protein_coding	-	CCDS21610.1	1	658	0	0.2	1.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109497	Olfr492	ENSMUST00000079865	ENSMUSP00000146417	TRANSLATION	protein_coding	-	CCDS85376.1	-	314	0	0	0.5	168	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050708	Ftl1	ENSMUST00000094434	ENSMUSP00000092002	TRANSLATION	protein_coding	-	CCDS39952.1	1	183	13	4.75	1.5	104.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050708	Ftl1	ENSMUST00000210864	ENSMUSP00000147389	TRANSLATION	protein_coding	-	-	5	160	7	4	0	54.4	0	-4,-7	-	-	9.51	MINOR
ENSMUSG00000050708	Ftl1	ENSMUST00000210106	ENSMUSP00000147526	TRANSLATION	nonsense_mediated_decay	-	-	1	84	9	2.75	0	49	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050708	Ftl1	ENSMUST00000211500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050708	Ftl1	ENSMUST00000211694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050708	Ftl1	ENSMUST00000210375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012640	Zfp715	ENSMUST00000145622	ENSMUSP00000138240	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012640	Zfp715	ENSMUST00000012796	ENSMUSP00000012796	TRANSLATION	protein_coding	-	-	1	183	6	2.1	0	95.1	0	-4,-5	-	-	4.2	MINOR
ENSMUSG00000012640	Zfp715	ENSMUST00000139061	ENSMUSP00000114600	TRANSLATION	protein_coding	stop	-	3	194	0	1	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012640	Zfp715	ENSMUST00000151659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012640	Zfp715	ENSMUST00000048015	ENSMUSP00000040282	TRANSLATION	protein_coding	-	CCDS39928.1	1	886	72	3	0.5	423.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000012640	Zfp715	ENSMUST00000135130	ENSMUSP00000122812	TRANSLATION	protein_coding	stop	-	3	87	0	1	0	75	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012640	Zfp715	ENSMUST00000107986	ENSMUSP00000103620	TRANSLATION	protein_coding	-	CCDS39928.1	1	886	72	3	0.5	423.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050425	Mrgprb2	ENSMUST00000052730	ENSMUSP00000061878	TRANSLATION	protein_coding	-	CCDS21303.1	1	338	0	0.24	0.5	23.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094542	Vmn1r149	ENSMUST00000165916	ENSMUSP00000132932	TRANSLATION	protein_coding	-	CCDS52113.1	-	307	0	0	1.5	49.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000078795	Ceacam15	ENSMUST00000108498	ENSMUSP00000104138	TRANSLATION	protein_coding	-	CCDS52041.1	1	234	0	2	0.5	86.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000096283	Gm6176	ENSMUST00000207633	ENSMUSP00000147031	TRANSLATION	protein_coding	-	-	1	301	16	1	0.5	241.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096283	Gm6176	ENSMUST00000178209	ENSMUSP00000137264	TRANSLATION	protein_coding	-	-	-	301	16	1	0.5	241.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048921	Zfp689	ENSMUST00000053392	ENSMUSP00000056610	TRANSLATION	protein_coding	-	CCDS21867.1	1	500	43	2.4	5.1	279.2	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000048921	Zfp689	ENSMUST00000106299	ENSMUSP00000101906	TRANSLATION	protein_coding	-	-	1	360	23	1.4	0	192.8	0	-4,-2	-	-	4.314	MINOR
ENSMUSG00000002957	Ap2a2	ENSMUST00000201261	ENSMUSP00000144090	TRANSLATION	protein_coding	stop	-	3	131	6	2.948	0	114.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002957	Ap2a2	ENSMUST00000003038	ENSMUSP00000003038	TRANSLATION	protein_coding	-	CCDS40188.1	1	938	8	20.85	3.9	715.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000002957	Ap2a2	ENSMUST00000201320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051437	Ubqlnl	ENSMUST00000059121	ENSMUSP00000056365	TRANSLATION	protein_coding	-	CCDS21611.1	-	610	0	0	1.5	54.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000133666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000124240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000138219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000153857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000147520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000137987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000120705	ENSMUSP00000113307	TRANSLATION	protein_coding	-	CCDS40139.2	1	798	0	4.64	1.5	178.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042492	Tbc1d10b	ENSMUST00000205620	ENSMUSP00000146053	TRANSLATION	protein_coding	start	-	5	189	0	3	0	98.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000061626	Olfr68	ENSMUST00000216811	ENSMUSP00000150493	TRANSLATION	protein_coding	-	CCDS21591.1	5	315	0	0.2	7.5	335	5	-3,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000061626	Olfr68	ENSMUST00000072513	ENSMUSP00000072329	TRANSLATION	protein_coding	-	CCDS21591.1	-	315	0	0.2	7.5	335	5	-3,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000030651	Art2b	ENSMUST00000209526	ENSMUSP00000147267	TRANSLATION	protein_coding	-	-	5	286	16	1	0	282.3	0	2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000030651	Art2b	ENSMUST00000063920	ENSMUSP00000065658	TRANSLATION	protein_coding	-	CCDS21512.1	1	289	16	1	0.5	282.3	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000048078	Tenm4	ENSMUST00000107166	ENSMUSP00000102784	TRANSLATION	protein_coding	-	CCDS40024.1	1	2796	0	3.48	3.9	425.5	0	-4,-5	-	-	7	MINOR
ENSMUSG00000048078	Tenm4	ENSMUST00000147659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048078	Tenm4	ENSMUST00000107165	ENSMUSP00000102783	TRANSLATION	protein_coding	-	CCDS80753.1	1	2833	0	3.48	2.7	738.1	0	-4,-5	-	-	12.586	PRINCIPAL:1
ENSMUSG00000048078	Tenm4	ENSMUST00000138760	ENSMUSP00000114281	TRANSLATION	protein_coding	stop	-	5	101	0	0	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048078	Tenm4	ENSMUST00000107162	ENSMUSP00000102780	TRANSLATION	protein_coding	-	CCDS80754.1	1	2825	0	3.48	0.5	732	0	-4,-6	-	-	11.634	MINOR
ENSMUSG00000048078	Tenm4	ENSMUST00000144263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048078	Tenm4	ENSMUST00000130299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048078	Tenm4	ENSMUST00000129445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048078	Tenm4	ENSMUST00000133770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048078	Tenm4	ENSMUST00000140140	ENSMUSP00000145766	TRANSLATION	protein_coding	start	-	3	127	0	1.44	0	51.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048078	Tenm4	ENSMUST00000131541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048078	Tenm4	ENSMUST00000129737	ENSMUSP00000120529	TRANSLATION	protein_coding	stop	-	5	125	0	0	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030890	Ilk	ENSMUST00000163389	ENSMUSP00000130341	TRANSLATION	protein_coding	-	CCDS21659.1	1	452	5	12.24	17.5	245	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030890	Ilk	ENSMUST00000151108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030890	Ilk	ENSMUST00000127298	ENSMUSP00000116329	TRANSLATION	nonsense_mediated_decay	start	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030890	Ilk	ENSMUST00000153557	ENSMUSP00000147366	TRANSLATION	nonsense_mediated_decay	start	-	5	95	0	2.7	0	24.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030890	Ilk	ENSMUST00000154626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030890	Ilk	ENSMUST00000148971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030890	Ilk	ENSMUST00000033182	ENSMUSP00000033182	TRANSLATION	protein_coding	-	CCDS21659.1	1	452	5	12.24	17.5	245	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030890	Ilk	ENSMUST00000130565	ENSMUSP00000147693	TRANSLATION	nonsense_mediated_decay	start	-	2	54	5	1	0	21.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030890	Ilk	ENSMUST00000149695	ENSMUSP00000147503	TRANSLATION	nonsense_mediated_decay	-	-	1	233	0	5.06	0	72.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030890	Ilk	ENSMUST00000145123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030890	Ilk	ENSMUST00000152508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030890	Ilk	ENSMUST00000136687	ENSMUSP00000123443	TRANSLATION	protein_coding	stop	-	5	295	5	8.24	0	150.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000146130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014402	Tsg101	ENSMUST00000211076	ENSMUSP00000147701	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	2	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000140693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014402	Tsg101	ENSMUST00000143413	ENSMUSP00000121314	TRANSLATION	protein_coding	stop	-	5	139	0	3.83	0	108.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000209538	ENSMUSP00000147748	TRANSLATION	protein_coding	start	-	3	253	0	4.63	0	159.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000210664	ENSMUSP00000147749	TRANSLATION	protein_coding	stop	-	3	148	0	3.5	0	80.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000211595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014402	Tsg101	ENSMUST00000156335	ENSMUSP00000120856	TRANSLATION	protein_coding	stop	-	5	145	0	2.58	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014402	Tsg101	ENSMUST00000014546	ENSMUSP00000014546	TRANSLATION	protein_coding	-	CCDS21291.1	1	391	0	7.38	11.6	254.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002781	Tmem143	ENSMUST00000209292	ENSMUSP00000147352	TRANSLATION	nonsense_mediated_decay	start	-	2	255	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000002781	Tmem143	ENSMUST00000210044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002781	Tmem143	ENSMUST00000209350	ENSMUSP00000148217	TRANSLATION	protein_coding	-	-	1	453	0	0	0	34.3	3	-2,1	-	-	6	ALTERNATIVE:2
ENSMUSG00000002781	Tmem143	ENSMUST00000210503	ENSMUSP00000147779	TRANSLATION	protein_coding	stop	-	5	259	0	0	0	24.7	0	-2,1	-	-	-1	MINOR
ENSMUSG00000002781	Tmem143	ENSMUST00000210692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002781	Tmem143	ENSMUST00000210574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002781	Tmem143	ENSMUST00000069772	ENSMUSP00000070405	TRANSLATION	protein_coding	-	CCDS21269.1	1	458	0	0	3.9	34.3	3	-2,1	-	-	7	PRINCIPAL:2
ENSMUSG00000002781	Tmem143	ENSMUST00000209580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002781	Tmem143	ENSMUST00000211280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002781	Tmem143	ENSMUST00000209395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052305	Hbb-bs	ENSMUST00000023934	ENSMUSP00000023934	TRANSLATION	protein_coding	-	CCDS52339.1	1	147	20	3	11.7	103.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000052305	Hbb-bs	ENSMUST00000153218	ENSMUSP00000115607	TRANSLATION	protein_coding	stop	-	2	103	16	2	0	93.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052305	Hbb-bs	ENSMUST00000131960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066269	Olfr575	ENSMUST00000084812	ENSMUSP00000081873	TRANSLATION	protein_coding	-	CCDS21555.1	-	318	0	0.36	0.5	372.5	5	-4,-7	-	-	12	MINOR
ENSMUSG00000066269	Olfr575	ENSMUST00000213477	ENSMUSP00000149993	TRANSLATION	protein_coding	-	-	5	311	0	0.36	5.4	372.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000066269	Olfr575	ENSMUST00000216420	ENSMUSP00000150074	TRANSLATION	protein_coding	-	-	5	311	0	0.36	5.4	372.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030759	Far1	ENSMUST00000033018	ENSMUSP00000033018	TRANSLATION	protein_coding	-	CCDS40093.1	1	515	31	3.525	14.8	373.7	1	-4,-5	-	-	21.688	PRINCIPAL:1
ENSMUSG00000030759	Far1	ENSMUST00000123591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030759	Far1	ENSMUST00000067929	ENSMUSP00000064334	TRANSLATION	protein_coding	-	CCDS72024.1	1	515	31	3.525	6.4	378.9	1	-4,-5	-	-	19.564	MINOR
ENSMUSG00000030759	Far1	ENSMUST00000156554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030759	Far1	ENSMUST00000155183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030759	Far1	ENSMUST00000123845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030759	Far1	ENSMUST00000122890	ENSMUSP00000123274	TRANSLATION	protein_coding	stop	-	3	37	5	0	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030759	Far1	ENSMUST00000136158	ENSMUSP00000122643	TRANSLATION	protein_coding	stop	-	3	206	28	2.28	0	179.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030759	Far1	ENSMUST00000164745	ENSMUSP00000128695	TRANSLATION	protein_coding	-	CCDS40093.1	5	515	31	3.525	14.8	373.7	1	-4,-5	-	-	21.688	PRINCIPAL:1
ENSMUSG00000030759	Far1	ENSMUST00000151133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030759	Far1	ENSMUST00000129087	ENSMUSP00000117131	TRANSLATION	protein_coding	stop	-	3	181	23	2.28	0	174.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050281	Olfr630	ENSMUST00000106880	ENSMUSP00000102493	TRANSLATION	protein_coding	-	CCDS21589.1	5	319	0	0.2	6.4	399.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000050281	Olfr630	ENSMUST00000217072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109516	Gm6882	ENSMUST00000207192	ENSMUSP00000146341	TRANSLATION	protein_coding	-	-	5	313	17	0.8	0.5	235.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000109516	Gm6882	ENSMUST00000177741	ENSMUSP00000136005	TRANSLATION	protein_coding	-	-	-	313	17	0.8	0.5	235.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074071	Fam169b	ENSMUST00000098378	ENSMUSP00000146880	TRANSLATION	protein_coding	start	-	5	336	10	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074071	Fam169b	ENSMUST00000153805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074071	Fam169b	ENSMUST00000208070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074071	Fam169b	ENSMUST00000153458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074071	Fam169b	ENSMUST00000210558	ENSMUSP00000147610	TRANSLATION	protein_coding	-	-	5	342	10	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000074071	Fam169b	ENSMUST00000125685	ENSMUSP00000146700	TRANSLATION	protein_coding	-	CCDS85317.1	1	337	10	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035354	Uvrag	ENSMUST00000208012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035354	Uvrag	ENSMUST00000208992	ENSMUSP00000146640	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	0	0	21.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035354	Uvrag	ENSMUST00000207032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035354	Uvrag	ENSMUST00000208502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035354	Uvrag	ENSMUST00000207919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035354	Uvrag	ENSMUST00000208609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035354	Uvrag	ENSMUST00000037968	ENSMUSP00000045297	TRANSLATION	protein_coding	-	CCDS21476.1	1	698	0	0	1.5	86.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035354	Uvrag	ENSMUST00000209123	ENSMUSP00000146336	TRANSLATION	nonsense_mediated_decay	start	-	1	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025485	Ric8a	ENSMUST00000147815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025485	Ric8a	ENSMUST00000209766	ENSMUSP00000147952	TRANSLATION	protein_coding	start	-	5	328	0	0	0	289.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025485	Ric8a	ENSMUST00000131850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025485	Ric8a	ENSMUST00000210708	ENSMUSP00000147773	TRANSLATION	nonsense_mediated_decay	-	-	5	160	0	0	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025485	Ric8a	ENSMUST00000210601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025485	Ric8a	ENSMUST00000139956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025485	Ric8a	ENSMUST00000026558	ENSMUSP00000026558	TRANSLATION	protein_coding	-	CCDS21988.1	1	530	0	0	7.5	421.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025485	Ric8a	ENSMUST00000123925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025485	Ric8a	ENSMUST00000152212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025485	Ric8a	ENSMUST00000153498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025485	Ric8a	ENSMUST00000151384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025722	Wdr73	ENSMUST00000131651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025722	Wdr73	ENSMUST00000026816	ENSMUSP00000026816	TRANSLATION	protein_coding	-	CCDS52282.1	1	371	0	1.5	5.1	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000025722	Wdr73	ENSMUST00000147589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025722	Wdr73	ENSMUST00000135905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025722	Wdr73	ENSMUST00000147154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025722	Wdr73	ENSMUST00000145923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025722	Wdr73	ENSMUST00000133979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025722	Wdr73	ENSMUST00000152518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025722	Wdr73	ENSMUST00000146402	ENSMUSP00000119974	TRANSLATION	protein_coding	start/stop	-	3	240	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025722	Wdr73	ENSMUST00000139990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061000	Olfr507	ENSMUST00000080014	ENSMUSP00000078926	TRANSLATION	protein_coding	-	CCDS21721.1	-	316	0	0	2.7	172.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000004508	Gab2	ENSMUST00000004622	ENSMUSP00000004622	TRANSLATION	protein_coding	-	CCDS21455.1	1	666	11	0.78	1.5	75.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000004508	Gab2	ENSMUST00000206791	ENSMUSP00000146200	TRANSLATION	protein_coding	-	CCDS85340.1	1	665	11	0.78	1.5	75.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030990	Pgap2	ENSMUST00000146394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030990	Pgap2	ENSMUST00000124619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030990	Pgap2	ENSMUST00000146559	ENSMUSP00000123444	TRANSLATION	protein_coding	stop	-	3	24	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000142873	ENSMUSP00000121988	TRANSLATION	protein_coding	stop	-	3	135	3	0	0	60.4	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000138753	ENSMUSP00000116858	TRANSLATION	protein_coding	stop	-	2	123	3	0	0	51.7	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000126914	ENSMUSP00000114853	TRANSLATION	protein_coding	stop	-	2	101	3	0	0	50.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000033292	ENSMUSP00000033292	TRANSLATION	protein_coding	-	-	5	254	3	0	6.3	148.9	11	-4,-7	-	-	11	ALTERNATIVE:1
ENSMUSG00000030990	Pgap2	ENSMUST00000156529	ENSMUSP00000121521	TRANSLATION	protein_coding	-	CCDS40048.1	1	250	3	0	6.3	142.9	11	-4,-7	-	-	10.64	PRINCIPAL:2
ENSMUSG00000030990	Pgap2	ENSMUST00000129340	ENSMUSP00000119692	TRANSLATION	nonsense_mediated_decay	-	-	5	81	3	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000138479	ENSMUSP00000115590	TRANSLATION	protein_coding	stop	-	3	210	3	0	0	111.9	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000120879	ENSMUSP00000114016	TRANSLATION	protein_coding	-	CCDS40048.1	1	250	3	0	6.3	142.9	11	-4,-7	-	-	10.64	PRINCIPAL:2
ENSMUSG00000030990	Pgap2	ENSMUST00000140631	ENSMUSP00000119683	TRANSLATION	protein_coding	stop	-	3	41	3	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000143759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030990	Pgap2	ENSMUST00000147536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030990	Pgap2	ENSMUST00000140058	ENSMUSP00000122482	TRANSLATION	nonsense_mediated_decay	-	-	3	81	3	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000120119	ENSMUSP00000113574	TRANSLATION	protein_coding	-	-	1	252	0	0	1.7	143.5	7	-3,-7	-	-	5.94	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000150891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030990	Pgap2	ENSMUST00000119816	ENSMUSP00000113261	TRANSLATION	nonsense_mediated_decay	-	-	5	64	3	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000133311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030990	Pgap2	ENSMUST00000145352	ENSMUSP00000123523	TRANSLATION	nonsense_mediated_decay	-	-	5	64	3	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000146996	ENSMUSP00000118677	TRANSLATION	protein_coding	stop	-	5	55	3	0	0	0	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000127804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030990	Pgap2	ENSMUST00000134621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030990	Pgap2	ENSMUST00000143541	ENSMUSP00000117450	TRANSLATION	protein_coding	stop	-	5	79	3	0	0	34.1	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030990	Pgap2	ENSMUST00000153020	ENSMUSP00000123570	TRANSLATION	protein_coding	stop	-	5	210	3	0	0	111.9	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000055978	Fut2	ENSMUST00000211324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055978	Fut2	ENSMUST00000210620	ENSMUSP00000147471	TRANSLATION	protein_coding	stop	-	2	118	0	0	0	71.2	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000055978	Fut2	ENSMUST00000210470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055978	Fut2	ENSMUST00000069800	ENSMUSP00000063719	TRANSLATION	protein_coding	-	CCDS21258.1	1	347	0	0	0.5	454.7	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055978	Fut2	ENSMUST00000209759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030834	Abcc6	ENSMUST00000211220	ENSMUSP00000147676	TRANSLATION	protein_coding	start	-	3	182	8	3.4	0	72.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030834	Abcc6	ENSMUST00000211780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030834	Abcc6	ENSMUST00000002850	ENSMUSP00000002850	TRANSLATION	protein_coding	-	CCDS21272.1	1	1498	24	22.79	0.5	382.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030834	Abcc6	ENSMUST00000209985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030834	Abcc6	ENSMUST00000210962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030491	Tdrd12	ENSMUST00000032701	ENSMUSP00000032701	TRANSLATION	protein_coding	-	CCDS21151.1	1	407	0	1.909	0.5	87.4	0	-4,-5	-	-	0.972	MINOR
ENSMUSG00000030491	Tdrd12	ENSMUST00000127472	ENSMUSP00000118671	TRANSLATION	protein_coding	stop	-	3	204	0	1.069	0	48.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030491	Tdrd12	ENSMUST00000187190	ENSMUSP00000140328	TRANSLATION	protein_coding	stop	-	5	1113	0	5.789	0	149.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030491	Tdrd12	ENSMUST00000205407	ENSMUSP00000145609	TRANSLATION	protein_coding	-	-	5	354	0	1.669	0	48.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030491	Tdrd12	ENSMUST00000193633	ENSMUSP00000141796	TRANSLATION	protein_coding	-	-	5	1216	0	5.059	0	171.2	0	-4,-5	-	-	10.542	PRINCIPAL:1
ENSMUSG00000030491	Tdrd12	ENSMUST00000206641	ENSMUSP00000145652	TRANSLATION	protein_coding	start	-	3	127	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025509	Pnpla2	ENSMUST00000164924	ENSMUSP00000129632	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0.838	0	35.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025509	Pnpla2	ENSMUST00000169665	ENSMUSP00000127983	TRANSLATION	protein_coding	stop	-	5	305	0	0.64	0	35.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025509	Pnpla2	ENSMUST00000164016	ENSMUSP00000127149	TRANSLATION	protein_coding	-	CCDS52445.1	1	486	0	0.64	0.5	51	0	-4,-7	-	-	10.584	ALTERNATIVE:2
ENSMUSG00000025509	Pnpla2	ENSMUST00000165487	ENSMUSP00000132038	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025509	Pnpla2	ENSMUST00000064151	ENSMUSP00000065116	TRANSLATION	protein_coding	-	CCDS22015.1	1	430	0	0.64	0.5	51	0	-4,-7	-	-	10.584	PRINCIPAL:3
ENSMUSG00000025509	Pnpla2	ENSMUST00000169723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025509	Pnpla2	ENSMUST00000026583	ENSMUSP00000026583	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0.838	0	35.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033790	Tubgcp5	ENSMUST00000206789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033790	Tubgcp5	ENSMUST00000206454	ENSMUSP00000146178	TRANSLATION	protein_coding	start/stop	-	3	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033790	Tubgcp5	ENSMUST00000205718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033790	Tubgcp5	ENSMUST00000206660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033790	Tubgcp5	ENSMUST00000206133	ENSMUSP00000145677	TRANSLATION	nonsense_mediated_decay	start	-	3	49	0	0.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033790	Tubgcp5	ENSMUST00000205779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033790	Tubgcp5	ENSMUST00000205796	ENSMUSP00000146111	TRANSLATION	protein_coding	-	-	1	961	0	3.22	0	391.5	0	-4,-6	-	-	10.218	MINOR
ENSMUSG00000033790	Tubgcp5	ENSMUST00000206191	ENSMUSP00000146033	TRANSLATION	nonsense_mediated_decay	-	-	1	197	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033790	Tubgcp5	ENSMUST00000032627	ENSMUSP00000032627	TRANSLATION	protein_coding	-	CCDS21314.1	1	1024	0	3.22	1.5	421.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033790	Tubgcp5	ENSMUST00000205311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057770	Olfr668	ENSMUST00000215359	ENSMUSP00000150824	TRANSLATION	protein_coding	-	CCDS57572.1	5	318	0	0	7.6	342.3	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000057770	Olfr668	ENSMUST00000164391	ENSMUSP00000130975	TRANSLATION	protein_coding	-	CCDS57572.1	-	318	0	0	7.6	342.3	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000096180	Vmn2r49	ENSMUST00000108550	ENSMUSP00000104190	TRANSLATION	protein_coding	-	CCDS39765.1	1	852	0	2.92	1.5	387.1	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000025461	Cd163l1	ENSMUST00000211540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025461	Cd163l1	ENSMUST00000209398	ENSMUSP00000147864	TRANSLATION	protein_coding	-	-	1	991	9	2.8	0	589.2	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000025461	Cd163l1	ENSMUST00000209840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025461	Cd163l1	ENSMUST00000084460	ENSMUSP00000081497	TRANSLATION	protein_coding	-	CCDS40174.1	5	989	9	2.8	0.5	589.2	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000025461	Cd163l1	ENSMUST00000210159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025461	Cd163l1	ENSMUST00000209637	ENSMUSP00000147699	TRANSLATION	protein_coding	-	CCDS40174.1	1	989	9	2.8	0.5	589.2	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000025461	Cd163l1	ENSMUST00000209376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062797	Hikeshi	ENSMUST00000207695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062797	Hikeshi	ENSMUST00000078918	ENSMUSP00000077951	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	2.08	0	116.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062797	Hikeshi	ENSMUST00000153470	ENSMUSP00000119806	TRANSLATION	protein_coding	-	CCDS21445.1	1	197	0	4.91	17	190.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000062797	Hikeshi	ENSMUST00000150740	ENSMUSP00000146855	TRANSLATION	protein_coding	start	-	3	100	0	2.528	0	43.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062797	Hikeshi	ENSMUST00000208357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062797	Hikeshi	ENSMUST00000207309	ENSMUSP00000147050	TRANSLATION	protein_coding	-	-	5	130	0	2.08	0.5	116.4	0	-4,-7	-	-	1.92	MINOR
ENSMUSG00000062797	Hikeshi	ENSMUST00000130609	ENSMUSP00000147023	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062797	Hikeshi	ENSMUST00000075010	ENSMUSP00000102856	TRANSLATION	protein_coding	-	CCDS80748.1	3	158	0	3.83	7.9	129.9	0	-4,-5	-	-	7.952	MINOR
ENSMUSG00000098094	Scgb2b17	ENSMUST00000182139	ENSMUSP00000138629	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000098094	Scgb2b17	ENSMUST00000182640	ENSMUSP00000138414	TRANSLATION	protein_coding	-	-	3	81	0	0	0.5	25.1	0	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000098094	Scgb2b17	ENSMUST00000182673	ENSMUSP00000138446	TRANSLATION	protein_coding	-	CCDS59728.1	2	82	0	0	0.5	25.1	0	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000048620	Olfr1336	ENSMUST00000214301	ENSMUSP00000150162	TRANSLATION	protein_coding	-	CCDS20777.1	5	314	0	0.16	3.9	176.1	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000048620	Olfr1336	ENSMUST00000056120	ENSMUSP00000056956	TRANSLATION	protein_coding	-	CCDS20777.1	-	314	0	0.16	3.9	176.1	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032812	Arap1	ENSMUST00000148902	ENSMUSP00000123542	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000125284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032812	Arap1	ENSMUST00000152082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032812	Arap1	ENSMUST00000210162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032812	Arap1	ENSMUST00000107010	ENSMUSP00000102624	TRANSLATION	protein_coding	-	CCDS40041.1	1	1441	4	11.022	0.5	472.4	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000032812	Arap1	ENSMUST00000098243	ENSMUSP00000095844	TRANSLATION	protein_coding	-	CCDS40042.1	1	727	0	5.562	0.5	290.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000084895	ENSMUSP00000081957	TRANSLATION	protein_coding	-	CCDS21510.1	1	1193	4	9.822	0.5	434.9	0	-4,-6	-	-	11.35	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000124637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032812	Arap1	ENSMUST00000141083	ENSMUSP00000120168	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000155754	ENSMUSP00000147974	TRANSLATION	protein_coding	stop	-	3	34	0	0.282	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000156017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032812	Arap1	ENSMUST00000138628	ENSMUSP00000114197	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000084896	ENSMUSP00000081958	TRANSLATION	protein_coding	-	-	1	1452	4	11.022	0.5	469	0	-4,-6	-	-	15.796	ALTERNATIVE:2
ENSMUSG00000032812	Arap1	ENSMUST00000213314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032812	Arap1	ENSMUST00000153340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032812	Arap1	ENSMUST00000137384	ENSMUSP00000118657	TRANSLATION	protein_coding	stop	-	3	54	0	0.2	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000127873	ENSMUSP00000121257	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000130016	ENSMUSP00000115850	TRANSLATION	protein_coding	stop	-	2	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000134143	ENSMUSP00000115107	TRANSLATION	protein_coding	stop	-	3	111	0	0.85	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032812	Arap1	ENSMUST00000133423	ENSMUSP00000121431	TRANSLATION	protein_coding	stop	-	2	57	0	1.2	0	36.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057465	Saa2	ENSMUST00000210769	ENSMUSP00000147751	TRANSLATION	protein_coding	-	CCDS21285.1	1	122	0	2.6	0.5	158.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000057465	Saa2	ENSMUST00000211766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057465	Saa2	ENSMUST00000075982	ENSMUSP00000075365	TRANSLATION	protein_coding	-	CCDS21285.1	1	122	0	2.6	0.5	158.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000057465	Saa2	ENSMUST00000210272	ENSMUSP00000147266	TRANSLATION	protein_coding	-	-	3	88	0	2	0	141.5	0	-4,-5	-	-	9.576	MINOR
ENSMUSG00000041141	Pnmal1	ENSMUST00000038163	ENSMUSP00000040929	TRANSLATION	protein_coding	-	CCDS20858.1	1	430	0	0	0.5	355.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030942	Thumpd1	ENSMUST00000033236	ENSMUSP00000033236	TRANSLATION	protein_coding	-	CCDS21785.1	1	350	0	1.6	3.9	85	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000030942	Thumpd1	ENSMUST00000209175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030956	Fam53b	ENSMUST00000106165	ENSMUSP00000101771	TRANSLATION	protein_coding	-	-	1	309	0	0	0	376.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000030956	Fam53b	ENSMUST00000097999	ENSMUSP00000095608	TRANSLATION	protein_coding	-	CCDS21926.1	1	422	0	0	5.1	376.4	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000030956	Fam53b	ENSMUST00000106166	ENSMUSP00000101772	TRANSLATION	protein_coding	-	-	1	309	0	0	0	376.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000030956	Fam53b	ENSMUST00000148303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030956	Fam53b	ENSMUST00000106169	ENSMUSP00000101775	TRANSLATION	protein_coding	-	CCDS21926.1	1	422	0	0	5.1	376.4	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000030956	Fam53b	ENSMUST00000140865	ENSMUSP00000116561	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030956	Fam53b	ENSMUST00000134946	ENSMUSP00000118953	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	56.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030956	Fam53b	ENSMUST00000106168	ENSMUSP00000101774	TRANSLATION	protein_coding	-	CCDS85437.1	1	392	0	0	2.7	343	0	-4,-5	-	-	4.826	MINOR
ENSMUSG00000030956	Fam53b	ENSMUST00000146460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030956	Fam53b	ENSMUST00000065371	ENSMUSP00000070763	TRANSLATION	protein_coding	-	CCDS21926.1	1	422	0	0	5.1	376.4	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000030956	Fam53b	ENSMUST00000097998	ENSMUSP00000095607	TRANSLATION	protein_coding	-	-	1	96	0	0	0	28.4	0	-4,-2	-	-	0	MINOR
ENSMUSG00000046826	Fam187b	ENSMUST00000128384	ENSMUSP00000144424	TRANSLATION	protein_coding	-	-	2	374	0	0	0	0	1	-1,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000046826	Fam187b	ENSMUST00000058093	ENSMUSP00000057020	TRANSLATION	protein_coding	-	CCDS21120.1	1	358	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000046826	Fam187b	ENSMUST00000206754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046826	Fam187b	ENSMUST00000129773	ENSMUSP00000144533	TRANSLATION	protein_coding	-	-	1	95	0	0	0	0	1	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000005649	Cabp5	ENSMUST00000152995	ENSMUSP00000122731	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005649	Cabp5	ENSMUST00000005791	ENSMUSP00000005791	TRANSLATION	protein_coding	-	CCDS20831.1	1	173	14	4.544	8.3	96.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000005649	Cabp5	ENSMUST00000117400	ENSMUSP00000112415	TRANSLATION	protein_coding	-	-	1	178	13	4.214	0	84.4	0	-4,-6	-	-	15.912	MINOR
ENSMUSG00000117863	Vmn1r61	ENSMUST00000164880	ENSMUSP00000128012	TRANSLATION	protein_coding	-	CCDS51986.1	-	300	0	0	0.5	63.2	5	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000117863	Vmn1r61	ENSMUST00000236051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117863	Vmn1r61	ENSMUST00000238026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117863	Vmn1r61	ENSMUST00000238042	ENSMUSP00000157894	TRANSLATION	nonsense_mediated_decay	-	-	-	300	0	0	0.5	63.2	5	3,-2	-	-	-1	MINOR
ENSMUSG00000048425	Olfr686	ENSMUST00000216143	ENSMUSP00000149307	TRANSLATION	protein_coding	-	CCDS21645.1	5	317	0	0.16	1.5	306	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048425	Olfr686	ENSMUST00000050157	ENSMUSP00000049601	TRANSLATION	protein_coding	-	CCDS21645.1	-	317	0	0.16	1.5	306	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048425	Olfr686	ENSMUST00000214147	ENSMUSP00000150746	TRANSLATION	protein_coding	-	CCDS21645.1	5	317	0	0.16	1.5	306	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048425	Olfr686	ENSMUST00000216613	ENSMUSP00000148898	TRANSLATION	protein_coding	-	CCDS21645.1	5	317	0	0.16	1.5	306	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030554	Synm	ENSMUST00000208815	ENSMUSP00000147111	TRANSLATION	protein_coding	-	-	5	674	0	1.61	0	124	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030554	Synm	ENSMUST00000051389	ENSMUSP00000050987	TRANSLATION	protein_coding	-	CCDS39983.1	1	1259	0	1.61	0.5	124	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030554	Synm	ENSMUST00000074233	ENSMUSP00000073855	TRANSLATION	protein_coding	-	CCDS39982.1	1	1561	0	1.61	0.5	124	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000030554	Synm	ENSMUST00000208231	ENSMUSP00000147089	TRANSLATION	protein_coding	-	CCDS85316.1	1	371	0	1.61	0.5	124	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000030554	Synm	ENSMUST00000207102	ENSMUSP00000146510	TRANSLATION	protein_coding	-	-	1	817	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000211778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030796	Tead2	ENSMUST00000097216	ENSMUSP00000103430	TRANSLATION	protein_coding	-	CCDS71957.1	1	410	0	9.04	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000210447	ENSMUSP00000148183	TRANSLATION	protein_coding	stop	-	5	245	0	4.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000209818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030796	Tead2	ENSMUST00000209437	ENSMUSP00000148005	TRANSLATION	protein_coding	stop	-	3	107	0	2.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000211138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030796	Tead2	ENSMUST00000210814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030796	Tead2	ENSMUST00000209708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030796	Tead2	ENSMUST00000209678	ENSMUSP00000147321	TRANSLATION	protein_coding	start/stop	-	2	129	0	2.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000211744	ENSMUSP00000147727	TRANSLATION	protein_coding	stop	-	5	175	0	3.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000209478	ENSMUSP00000147288	TRANSLATION	protein_coding	start	-	5	129	0	3.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000033060	ENSMUSP00000033060	TRANSLATION	protein_coding	-	CCDS21236.1	1	445	0	10.04	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000030796	Tead2	ENSMUST00000107801	ENSMUSP00000103431	TRANSLATION	protein_coding	-	CCDS21236.1	1	445	0	10.04	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000030796	Tead2	ENSMUST00000211594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030796	Tead2	ENSMUST00000209222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030796	Tead2	ENSMUST00000209343	ENSMUSP00000147746	TRANSLATION	protein_coding	stop	-	5	184	0	3.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030796	Tead2	ENSMUST00000210570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096002	Vmn2r53	ENSMUST00000233892	ENSMUSP00000156838	TRANSLATION	protein_coding	-	-	-	878	7	3.74	0	454.9	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000096002	Vmn2r53	ENSMUST00000232701	ENSMUSP00000156421	TRANSLATION	nonsense_mediated_decay	-	-	-	179	0	1.1	0	42.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000096002	Vmn2r53	ENSMUST00000170412	ENSMUSP00000126979	TRANSLATION	protein_coding	-	CCDS52018.1	5	806	7	3.44	0.5	454.9	7	-4,-6	-	-	17.4	PRINCIPAL:2
ENSMUSG00000030649	Anapc15	ENSMUST00000131269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030649	Anapc15	ENSMUST00000146286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030649	Anapc15	ENSMUST00000209334	ENSMUSP00000147346	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000144207	ENSMUSP00000114771	TRANSLATION	protein_coding	-	CCDS21518.1	1	132	0	3.5	1.5	135.1	0	-4,-7	-	-	12.124	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000150018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030649	Anapc15	ENSMUST00000137949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030649	Anapc15	ENSMUST00000032884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030649	Anapc15	ENSMUST00000129641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030649	Anapc15	ENSMUST00000106973	ENSMUSP00000102586	TRANSLATION	protein_coding	-	CCDS80762.1	2	121	0	3.5	17.3	135.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000030649	Anapc15	ENSMUST00000210984	ENSMUSP00000147669	TRANSLATION	protein_coding	stop	-	3	117	0	3	0	135.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000178851	ENSMUSP00000136164	TRANSLATION	protein_coding	-	CCDS21518.1	2	132	0	3.5	1.5	135.1	0	-4,-7	-	-	12.124	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000098237	ENSMUSP00000095839	TRANSLATION	protein_coding	-	-	1	161	0	3	0.5	135.1	0	-4,-7	-	-	10.998	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000106978	ENSMUSP00000102591	TRANSLATION	protein_coding	-	CCDS21518.1	1	132	0	3.5	1.5	135.1	0	-4,-7	-	-	12.124	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000035395	ENSMUSP00000040286	TRANSLATION	protein_coding	-	CCDS80760.1	1	141	0	3.5	0.5	135.1	0	-4,-1	-	-	12	MINOR
ENSMUSG00000030649	Anapc15	ENSMUST00000211100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030649	Anapc15	ENSMUST00000143835	ENSMUSP00000120373	TRANSLATION	protein_coding	stop	-	3	118	0	3	0	135.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096257	Ccer2	ENSMUST00000178767	ENSMUSP00000137487	TRANSLATION	protein_coding	-	CCDS57533.1	5	274	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000050085	Olfr622	ENSMUST00000058744	ENSMUSP00000058312	TRANSLATION	protein_coding	-	CCDS21583.1	-	317	0	0.36	5.1	333.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050085	Olfr622	ENSMUST00000216337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050085	Olfr622	ENSMUST00000216570	ENSMUSP00000151149	TRANSLATION	protein_coding	-	CCDS21583.1	5	317	0	0.36	5.1	333.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050085	Olfr622	ENSMUST00000213536	ENSMUSP00000150390	TRANSLATION	protein_coding	-	CCDS21583.1	5	317	0	0.36	5.1	333.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050366	Olfr524	ENSMUST00000215815	ENSMUSP00000150970	TRANSLATION	protein_coding	-	CCDS21969.1	5	318	0	0.28	1.5	188	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050366	Olfr524	ENSMUST00000051943	ENSMUSP00000053565	TRANSLATION	protein_coding	-	CCDS21969.1	-	318	0	0.28	1.5	188	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066721	Zfp575	ENSMUST00000094705	ENSMUSP00000092294	TRANSLATION	protein_coding	-	CCDS20956.1	1	239	23	0.6	1.5	104.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057667	Bloc1s3	ENSMUST00000077408	ENSMUSP00000076624	TRANSLATION	protein_coding	-	CCDS20904.1	1	195	0	0	1.5	145.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000073805	Insyn2a	ENSMUST00000210826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073805	Insyn2a	ENSMUST00000171394	ENSMUSP00000129222	TRANSLATION	protein_coding	-	CCDS52419.1	5	470	0	0	1.5	672.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073805	Insyn2a	ENSMUST00000210055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066240	Olfr517	ENSMUST00000084753	ENSMUSP00000081805	TRANSLATION	protein_coding	-	CCDS52357.1	-	314	0	0.42	7.5	201.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000066240	Olfr517	ENSMUST00000216500	ENSMUSP00000150980	TRANSLATION	protein_coding	-	CCDS52357.1	5	314	0	0.42	7.5	201.1	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030435	U2af2	ENSMUST00000207498	ENSMUSP00000147246	TRANSLATION	nonsense_mediated_decay	start	-	5	95	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030435	U2af2	ENSMUST00000207926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030435	U2af2	ENSMUST00000165399	ENSMUSP00000131458	TRANSLATION	protein_coding	-	-	5	307	0	6.5	1.7	87.4	0	-4,-6	-	-	8.742	MINOR
ENSMUSG00000030435	U2af2	ENSMUST00000207097	ENSMUSP00000147032	TRANSLATION	nonsense_mediated_decay	-	-	3	111	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030435	U2af2	ENSMUST00000005041	ENSMUSP00000005041	TRANSLATION	protein_coding	-	CCDS85208.1	1	471	0	7.5	7.5	113.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000030435	U2af2	ENSMUST00000208419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030435	U2af2	ENSMUST00000207960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030435	U2af2	ENSMUST00000207523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030435	U2af2	ENSMUST00000209099	ENSMUSP00000147013	TRANSLATION	protein_coding	-	CCDS57476.1	1	475	0	7.5	7.5	113.8	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000049123	Catsperg2	ENSMUST00000207483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049123	Catsperg2	ENSMUST00000207115	ENSMUSP00000147029	TRANSLATION	nonsense_mediated_decay	-	-	5	800	0	0	0	839.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049123	Catsperg2	ENSMUST00000061193	ENSMUSP00000052285	TRANSLATION	protein_coding	-	CCDS52173.1	5	1145	0	0	0.5	1919.9	1	0,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000049123	Catsperg2	ENSMUST00000209126	ENSMUSP00000147099	TRANSLATION	protein_coding	-	CCDS52173.1	1	1145	0	0	0.5	1919.9	1	0,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000049123	Catsperg2	ENSMUST00000207251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049123	Catsperg2	ENSMUST00000208607	ENSMUSP00000146678	TRANSLATION	nonsense_mediated_decay	-	-	2	788	0	0	0	1538.6	0	0,-1	-	-	-1	MINOR
ENSMUSG00000049123	Catsperg2	ENSMUST00000207130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049123	Catsperg2	ENSMUST00000208345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049123	Catsperg2	ENSMUST00000208371	ENSMUSP00000146472	TRANSLATION	nonsense_mediated_decay	-	-	5	341	0	0	0	535.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030685	Kctd13	ENSMUST00000032924	ENSMUSP00000032924	TRANSLATION	protein_coding	-	CCDS21851.1	1	329	0	2.4	5.1	63.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030685	Kctd13	ENSMUST00000141369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030685	Kctd13	ENSMUST00000139233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093942	Olfr46	ENSMUST00000072655	ENSMUSP00000072445	TRANSLATION	protein_coding	-	CCDS21981.1	-	318	0	0.3	0.5	171.1	7	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000093942	Olfr46	ENSMUST00000211771	ENSMUSP00000147582	TRANSLATION	protein_coding	-	-	2	310	0	0.3	2.8	171.1	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000093942	Olfr46	ENSMUST00000214180	ENSMUSP00000149158	TRANSLATION	protein_coding	-	-	5	310	0	0.3	2.8	171.1	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000053091	Lins1	ENSMUST00000121777	ENSMUSP00000112404	TRANSLATION	protein_coding	-	CCDS21348.2	2	764	0	0	0.5	550.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000053091	Lins1	ENSMUST00000153007	ENSMUSP00000121054	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000065323	ENSMUSP00000071009	TRANSLATION	nonsense_mediated_decay	-	-	1	231	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000077967	ENSMUSP00000077117	TRANSLATION	protein_coding	-	CCDS57555.1	2	759	0	0	0.5	550.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000053091	Lins1	ENSMUST00000133771	ENSMUSP00000117270	TRANSLATION	nonsense_mediated_decay	-	-	1	231	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000132351	ENSMUSP00000115180	TRANSLATION	protein_coding	start/stop	-	3	244	0	0	0	94	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000150071	ENSMUSP00000115330	TRANSLATION	protein_coding	stop	-	2	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000153773	ENSMUSP00000119187	TRANSLATION	protein_coding	start/stop	-	3	228	0	0	0	173	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000130161	ENSMUSP00000118620	TRANSLATION	nonsense_mediated_decay	-	-	1	231	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000132181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053091	Lins1	ENSMUST00000133199	ENSMUSP00000115124	TRANSLATION	nonsense_mediated_decay	start	-	5	226	0	0	0	238.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053091	Lins1	ENSMUST00000128486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060860	Ube2s	ENSMUST00000205885	ENSMUSP00000146213	TRANSLATION	protein_coding	stop	-	2	151	0	3.41	0	127.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060860	Ube2s	ENSMUST00000206139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060860	Ube2s	ENSMUST00000206669	ENSMUSP00000146276	TRANSLATION	protein_coding	stop	-	3	46	0	1	0	52.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060860	Ube2s	ENSMUST00000205815	ENSMUSP00000146232	TRANSLATION	nonsense_mediated_decay	-	-	1	226	0	4.21	0	137	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060860	Ube2s	ENSMUST00000079496	ENSMUSP00000078459	TRANSLATION	protein_coding	-	CCDS39743.1	1	223	0	4.96	6.3	137	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000035239	Neu3	ENSMUST00000036331	ENSMUSP00000045222	TRANSLATION	protein_coding	-	CCDS21489.1	1	418	3	1.28	1.5	124.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000092297	Vmn1r258	ENSMUST00000174451	ENSMUSP00000134516	TRANSLATION	protein_coding	-	CCDS71911.1	-	314	0	0	0.5	59.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000090864	Vmn2r40	ENSMUST00000171942	ENSMUSP00000132332	TRANSLATION	protein_coding	-	CCDS57487.1	5	852	0	2.92	1.5	385	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000074378	Bsph1	ENSMUST00000098811	ENSMUSP00000096408	TRANSLATION	protein_coding	-	CCDS20832.1	1	133	9	2.612	0.5	98.2	0	1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000074378	Bsph1	ENSMUST00000204715	ENSMUSP00000144997	TRANSLATION	protein_coding	-	CCDS85218.1	1	123	9	2.348	0.5	98.2	0	2,-2	-	-	17.394	ALTERNATIVE:2
ENSMUSG00000030888	Rrp8	ENSMUST00000127738	ENSMUSP00000147906	TRANSLATION	nonsense_mediated_decay	start	-	3	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030888	Rrp8	ENSMUST00000033179	ENSMUSP00000033179	TRANSLATION	protein_coding	-	CCDS21658.1	1	457	12	5.88	1.5	347.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030888	Rrp8	ENSMUST00000137902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030888	Rrp8	ENSMUST00000098148	ENSMUSP00000095752	TRANSLATION	protein_coding	-	CCDS57576.1	1	503	12	5.88	0.5	347.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000030888	Rrp8	ENSMUST00000148176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030888	Rrp8	ENSMUST00000154852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030584	Dpf1	ENSMUST00000128145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030584	Dpf1	ENSMUST00000138993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030584	Dpf1	ENSMUST00000049977	ENSMUSP00000054385	TRANSLATION	protein_coding	-	CCDS21071.1	1	388	21	5.15	6.3	169.7	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000030584	Dpf1	ENSMUST00000126169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030584	Dpf1	ENSMUST00000137848	ENSMUSP00000120956	TRANSLATION	protein_coding	start/stop	-	3	143	3	1.25	0	59.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030584	Dpf1	ENSMUST00000142958	ENSMUSP00000117186	TRANSLATION	protein_coding	start/stop	-	3	146	14	3.65	0	37.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030584	Dpf1	ENSMUST00000108231	ENSMUSP00000103866	TRANSLATION	protein_coding	-	-	5	398	21	5.15	4.8	160.9	0	-4,-5	-	-	18.906	MINOR
ENSMUSG00000030584	Dpf1	ENSMUST00000207677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030584	Dpf1	ENSMUST00000065181	ENSMUSP00000070539	TRANSLATION	protein_coding	-	-	5	387	21	5.15	6.3	169.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000030584	Dpf1	ENSMUST00000154222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030584	Dpf1	ENSMUST00000108230	ENSMUSP00000103865	TRANSLATION	protein_coding	-	-	5	353	17	4.05	0	160.9	0	-4,-5	-	-	12.606	MINOR
ENSMUSG00000073925	Olfr654	ENSMUST00000210457	ENSMUSP00000147481	TRANSLATION	protein_coding	-	-	-	324	0	0.36	4.6	344.6	8	-4,-6	-	-	13	ALTERNATIVE:1
ENSMUSG00000073925	Olfr654	ENSMUST00000213984	ENSMUSP00000149640	TRANSLATION	protein_coding	-	-	5	324	0	0.36	4.6	344.6	8	-4,-6	-	-	13	ALTERNATIVE:1
ENSMUSG00000073925	Olfr654	ENSMUST00000098173	ENSMUSP00000095775	TRANSLATION	protein_coding	-	CCDS21620.1	-	341	0	0.36	0.5	344.6	8	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000059146	Ntrk3	ENSMUST00000206949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000205411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000039431	ENSMUSP00000037909	TRANSLATION	protein_coding	-	CCDS21371.1	1	825	19	14.359	1.5	551.8	2	2,-2	-	-	17.94	PRINCIPAL:2
ENSMUSG00000059146	Ntrk3	ENSMUST00000205700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000039438	ENSMUSP00000038324	TRANSLATION	protein_coding	-	CCDS21372.1	1	612	0	9.029	1.5	233.7	2	2,-2	-	-	0	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000206268	ENSMUSP00000146188	TRANSLATION	protein_coding	stop	-	5	86	0	1	0	30.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000155795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059146	Ntrk3	ENSMUST00000206091	ENSMUSP00000145958	TRANSLATION	protein_coding	stop	-	3	82	0	1	0	30.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000206500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000195262	ENSMUSP00000141599	TRANSLATION	protein_coding	-	-	5	864	19	14.014	1.5	533.7	2	2,-2	-	-	16.164	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000205312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000206167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000193002	ENSMUSP00000141534	TRANSLATION	protein_coding	-	-	5	839	19	14.389	1.5	534.4	2	2,-2	-	-	16.956	ALTERNATIVE:2
ENSMUSG00000059146	Ntrk3	ENSMUST00000151885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000205354	ENSMUSP00000145681	TRANSLATION	nonsense_mediated_decay	start	-	1	61	0	1	0	33.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000206849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000206599	ENSMUSP00000145774	TRANSLATION	nonsense_mediated_decay	start	-	5	12	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000205868	ENSMUSP00000145689	TRANSLATION	nonsense_mediated_decay	start	-	5	38	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000059146	Ntrk3	ENSMUST00000206752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059146	Ntrk3	ENSMUST00000206877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055026	Gabrg3	ENSMUST00000068394	ENSMUSP00000065255	TRANSLATION	protein_coding	-	-	1	145	0	1.36	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000055026	Gabrg3	ENSMUST00000068911	ENSMUSP00000067632	TRANSLATION	protein_coding	-	CCDS21320.1	1	467	0	5.775	6.3	298.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055026	Gabrg3	ENSMUST00000171965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006024	Napa	ENSMUST00000124563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006024	Napa	ENSMUST00000139507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006024	Napa	ENSMUST00000150208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006024	Napa	ENSMUST00000006181	ENSMUSP00000006181	TRANSLATION	protein_coding	-	CCDS20843.1	1	295	0	8.5	19.5	368.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006024	Napa	ENSMUST00000127637	ENSMUSP00000147358	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006024	Napa	ENSMUST00000132828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006024	Napa	ENSMUST00000140640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030544	Mesp1	ENSMUST00000032760	ENSMUSP00000032760	TRANSLATION	protein_coding	-	CCDS21387.1	1	243	0	0.2	1.5	51.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094152	Slc6a16	ENSMUST00000179310	ENSMUSP00000151159	TRANSLATION	protein_coding	start/stop	-	5	669	0	4.2	0	329.3	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000094152	Slc6a16	ENSMUST00000213347	ENSMUSP00000149306	TRANSLATION	protein_coding	-	-	5	742	0	4.34	0.5	342.4	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094152	Slc6a16	ENSMUST00000210163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073900	Olfr704	ENSMUST00000217204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073900	Olfr704	ENSMUST00000217164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073900	Olfr704	ENSMUST00000080925	ENSMUSP00000079726	TRANSLATION	protein_coding	-	CCDS21675.1	5	315	0	0.36	2.8	164.1	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073900	Olfr704	ENSMUST00000098141	ENSMUSP00000095745	TRANSLATION	protein_coding	-	CCDS21675.1	-	315	0	0.36	2.8	164.1	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000110190	Zscan4-ps2	ENSMUST00000091440	ENSMUSP00000089014	TRANSLATION	protein_coding	-	-	1	506	15	0.2	0.5	112.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073964	Olfr570	ENSMUST00000209778	ENSMUSP00000148181	TRANSLATION	protein_coding	-	CCDS21551.1	5	312	0	0.2	4.2	375.1	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073964	Olfr570	ENSMUST00000098215	ENSMUSP00000095817	TRANSLATION	protein_coding	-	CCDS21551.1	-	312	0	0.2	4.2	375.1	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000033916	Chmp2a	ENSMUST00000005711	ENSMUSP00000005711	TRANSLATION	protein_coding	-	CCDS20824.1	1	222	0	2.104	11.7	158.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000033916	Chmp2a	ENSMUST00000210587	ENSMUSP00000148218	TRANSLATION	protein_coding	-	CCDS20824.1	3	222	0	2.104	11.7	158.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000033916	Chmp2a	ENSMUST00000209487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033916	Chmp2a	ENSMUST00000211626	ENSMUSP00000147393	TRANSLATION	protein_coding	-	-	2	172	0	1.504	0	87.4	0	-4,-2	-	-	6.018	MINOR
ENSMUSG00000033916	Chmp2a	ENSMUST00000211344	ENSMUSP00000148233	TRANSLATION	protein_coding	-	-	5	162	0	1.24	0	51.4	0	-4,-2	-	-	3.534	MINOR
ENSMUSG00000033916	Chmp2a	ENSMUST00000211369	ENSMUSP00000147937	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0.64	0	27.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000011751	Sptbn4	ENSMUST00000011895	ENSMUSP00000011895	TRANSLATION	protein_coding	-	CCDS21019.1	1	2561	4	23.54	1.5	937.4	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000011751	Sptbn4	ENSMUST00000172269	ENSMUSP00000132807	TRANSLATION	protein_coding	-	-	2	2555	4	23.54	0	935.8	0	-4,-5	-	-	15.904	ALTERNATIVE:2
ENSMUSG00000011751	Sptbn4	ENSMUST00000108364	ENSMUSP00000104001	TRANSLATION	protein_coding	-	CCDS57530.1	1	1241	4	11.5	2.7	464.1	0	-4,-7	-	-	4	MINOR
ENSMUSG00000011751	Sptbn4	ENSMUST00000137414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011751	Sptbn4	ENSMUST00000108362	ENSMUSP00000103999	TRANSLATION	protein_coding	-	CCDS57530.1	1	1241	4	11.5	2.7	464.1	0	-4,-7	-	-	4	MINOR
ENSMUSG00000011751	Sptbn4	ENSMUST00000152572	ENSMUSP00000120738	TRANSLATION	protein_coding	stop	-	2	128	0	1	0	35	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011751	Sptbn4	ENSMUST00000108363	ENSMUSP00000104000	TRANSLATION	protein_coding	-	CCDS57530.1	1	1241	4	11.5	2.7	464.1	0	-4,-7	-	-	4	MINOR
ENSMUSG00000030851	Ldhc	ENSMUST00000210585	ENSMUSP00000147492	TRANSLATION	protein_coding	-	-	1	274	22	6.75	1.2	186.3	0	-4,-5	-	-	8.079	MINOR
ENSMUSG00000030851	Ldhc	ENSMUST00000211784	ENSMUSP00000148038	TRANSLATION	protein_coding	-	-	1	171	20	3.32	0	129.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030851	Ldhc	ENSMUST00000148565	ENSMUSP00000114206	TRANSLATION	protein_coding	stop	-	3	235	26	5	0	183	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030851	Ldhc	ENSMUST00000014545	ENSMUSP00000014545	TRANSLATION	protein_coding	-	CCDS21290.1	1	332	29	7.75	7.5	242.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030851	Ldhc	ENSMUST00000126004	ENSMUSP00000115652	TRANSLATION	protein_coding	stop	-	5	236	26	5	0	183	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030963	Umod	ENSMUST00000207261	ENSMUSP00000147128	TRANSLATION	protein_coding	stop	-	3	87	6	0.5	0	45.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030963	Umod	ENSMUST00000209095	ENSMUSP00000146652	TRANSLATION	protein_coding	-	CCDS21780.1	1	642	14	6.97	0.5	297.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030963	Umod	ENSMUST00000207729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030963	Umod	ENSMUST00000207460	ENSMUSP00000146628	TRANSLATION	protein_coding	stop	-	3	187	14	1.12	0	126.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030963	Umod	ENSMUST00000033263	ENSMUSP00000033263	TRANSLATION	protein_coding	-	CCDS21780.1	1	642	14	6.97	0.5	297.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030963	Umod	ENSMUST00000207378	ENSMUSP00000147039	TRANSLATION	nonsense_mediated_decay	start	-	5	77	6	0.64	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045868	Gvin1	ENSMUST00000183409	ENSMUSP00000138950	TRANSLATION	protein_coding	-	CCDS21663.1	1	2427	16	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045868	Gvin1	ENSMUST00000006667	ENSMUSP00000006667	TRANSLATION	protein_coding	-	CCDS21663.1	1	2427	16	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036854	Hspb6	ENSMUST00000126989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036854	Hspb6	ENSMUST00000146732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036854	Hspb6	ENSMUST00000123355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036854	Hspb6	ENSMUST00000044048	ENSMUSP00000039172	TRANSLATION	protein_coding	-	CCDS21097.1	1	162	0	3	3.9	145.4	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000054385	Ceacam2	ENSMUST00000044547	ENSMUSP00000048118	TRANSLATION	protein_coding	-	CCDS52153.1	5	520	0	4	0.5	190.3	1	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000054385	Ceacam2	ENSMUST00000145681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054385	Ceacam2	ENSMUST00000064862	ENSMUSP00000068540	TRANSLATION	protein_coding	-	CCDS20986.1	1	272	0	2	0.5	90.1	1	3,-1	-	-	1.998	MINOR
ENSMUSG00000054385	Ceacam2	ENSMUST00000066503	ENSMUSP00000064255	TRANSLATION	protein_coding	-	CCDS52152.1	1	340	0	2	0.5	90.1	1	3,-1	-	-	1.998	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000145381	ENSMUSP00000123439	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	133.6	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000208713	ENSMUSP00000147004	TRANSLATION	protein_coding	start	-	5	112	0	0	0	142.3	8	-1,-4	-	-	-1	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000207090	ENSMUSP00000147218	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000032985	ENSMUSP00000032985	TRANSLATION	protein_coding	-	CCDS21485.1	1	683	0	0	1.5	647.4	16	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000030737	Slco2b1	ENSMUST00000137914	ENSMUSP00000115872	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	26.4	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000107088	ENSMUSP00000102703	TRANSLATION	protein_coding	-	CCDS57567.1	1	693	0	0	1.5	647.4	16	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030737	Slco2b1	ENSMUST00000107086	ENSMUSP00000102701	TRANSLATION	protein_coding	-	CCDS21485.1	1	683	0	0	1.5	647.4	16	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000030737	Slco2b1	ENSMUST00000208225	ENSMUSP00000146717	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	133.6	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000030737	Slco2b1	ENSMUST00000154295	ENSMUSP00000121002	TRANSLATION	protein_coding	start	-	3	203	0	0	0	149.3	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000038296	Galnt18	ENSMUST00000106663	ENSMUSP00000102274	TRANSLATION	protein_coding	-	-	1	607	16	6.3	12.8	139.8	1	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000038296	Galnt18	ENSMUST00000049430	ENSMUSP00000043636	TRANSLATION	protein_coding	-	CCDS21751.1	1	622	16	6.05	0.5	139.8	1	-4,-5	-	-	17.502	MINOR
ENSMUSG00000019194	Scn1b	ENSMUST00000211945	ENSMUSP00000148295	TRANSLATION	protein_coding	-	CCDS21126.1	5	218	0	1.56	7.5	57.8	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000019194	Scn1b	ENSMUST00000098548	ENSMUSP00000096148	TRANSLATION	protein_coding	-	CCDS21126.1	1	218	0	1.56	7.5	57.8	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000019194	Scn1b	ENSMUST00000211923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030403	Vasp	ENSMUST00000206229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030403	Vasp	ENSMUST00000161488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030403	Vasp	ENSMUST00000032561	ENSMUSP00000032561	TRANSLATION	protein_coding	-	CCDS52056.1	1	375	0	4.06	1.5	186.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030403	Vasp	ENSMUST00000162717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038888	Ctu1	ENSMUST00000038332	ENSMUSP00000036770	TRANSLATION	protein_coding	-	CCDS21179.1	1	420	18	0.82	0.5	49.1	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000110104	Gm45717	ENSMUST00000211129	ENSMUSP00000148225	TRANSLATION	protein_coding,RT	-	-	3	152	0	0	0	94	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000030553	Pgpep1l	ENSMUST00000207874	ENSMUSP00000146996	TRANSLATION	protein_coding	-	-	5	206	0	2.57	0	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030553	Pgpep1l	ENSMUST00000032770	ENSMUSP00000032770	TRANSLATION	protein_coding	-	CCDS52271.1	1	130	0	0.92	0.5	0	0	-4,-5	-	-	2.148	MINOR
ENSMUSG00000030766	Arhgap17	ENSMUST00000207010	ENSMUSP00000145628	TRANSLATION	protein_coding	-	CCDS85405.1	1	740	0	7.97	0.5	366.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030766	Arhgap17	ENSMUST00000106442	ENSMUSP00000102050	TRANSLATION	protein_coding	-	CCDS52389.1	1	846	0	7.97	0.5	366.2	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000030766	Arhgap17	ENSMUST00000205936	ENSMUSP00000146019	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030766	Arhgap17	ENSMUST00000205262	ENSMUSP00000146035	TRANSLATION	protein_coding	-	CCDS52388.1	1	727	0	7.97	0.5	366.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030766	Arhgap17	ENSMUST00000205805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030766	Arhgap17	ENSMUST00000206117	ENSMUSP00000145627	TRANSLATION	nonsense_mediated_decay	-	-	1	230	0	2.88	0	198.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030766	Arhgap17	ENSMUST00000098060	ENSMUSP00000095668	TRANSLATION	protein_coding	-	CCDS85404.1	1	768	0	7.97	0.5	366.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030766	Arhgap17	ENSMUST00000205785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030766	Arhgap17	ENSMUST00000206803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030766	Arhgap17	ENSMUST00000167309	ENSMUSP00000128447	TRANSLATION	protein_coding	-	CCDS52390.1	1	818	0	7.97	0.5	366.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000030766	Arhgap17	ENSMUST00000206294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047730	Fcgbp	ENSMUST00000154481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047730	Fcgbp	ENSMUST00000138392	ENSMUSP00000114271	TRANSLATION	protein_coding	-	-	5	2583	0	0	1.5	1630.8	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000047730	Fcgbp	ENSMUST00000076648	ENSMUSP00000075945	TRANSLATION	protein_coding	-	CCDS52159.1	5	2583	0	0	1.5	1627.7	0	3,-2	-	-	5.814	PRINCIPAL:2
ENSMUSG00000047730	Fcgbp	ENSMUST00000148946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047730	Fcgbp	ENSMUST00000140004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047730	Fcgbp	ENSMUST00000131090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092216	Gm19345	ENSMUST00000172815	ENSMUSP00000134044	TRANSLATION	protein_coding	-	CCDS57502.1	1	124	3	0	0.5	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000030543	Mesp2	ENSMUST00000107394	ENSMUSP00000103017	TRANSLATION	protein_coding	-	CCDS39993.1	1	370	0	0	0.5	51.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060279	Ap2a1	ENSMUST00000166972	ENSMUSP00000127842	TRANSLATION	protein_coding	-	CCDS52239.1	1	977	8	19.95	5.1	713.9	0	-4,-6	-	-	20	PRINCIPAL:4
ENSMUSG00000060279	Ap2a1	ENSMUST00000208472	ENSMUSP00000146814	TRANSLATION	protein_coding	start/stop	-	5	317	0	5.2	0	163.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060279	Ap2a1	ENSMUST00000207554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060279	Ap2a1	ENSMUST00000167930	ENSMUSP00000127497	TRANSLATION	protein_coding	-	-	5	955	8	19.7	5.1	713.9	0	-4,-6	-	-	19.502	ALTERNATIVE:1
ENSMUSG00000060279	Ap2a1	ENSMUST00000208285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060279	Ap2a1	ENSMUST00000208813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060279	Ap2a1	ENSMUST00000207814	ENSMUSP00000146338	TRANSLATION	nonsense_mediated_decay	start	-	2	57	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060279	Ap2a1	ENSMUST00000209067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060279	Ap2a1	ENSMUST00000085399	ENSMUSP00000082519	TRANSLATION	protein_coding	-	-	5	977	8	19.7	5.1	713.9	0	-4,-6	-	-	19.502	ALTERNATIVE:1
ENSMUSG00000060279	Ap2a1	ENSMUST00000208405	ENSMUSP00000146398	TRANSLATION	nonsense_mediated_decay	-	-	5	38	2	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060279	Ap2a1	ENSMUST00000107857	ENSMUSP00000103489	TRANSLATION	protein_coding	-	CCDS52238.1	1	955	8	19.95	5.1	713.9	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000051451	Crebzf	ENSMUST00000126041	ENSMUSP00000146706	TRANSLATION	nonsense_mediated_decay	-	-	3	125	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000146291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051451	Crebzf	ENSMUST00000061767	ENSMUSP00000050972	TRANSLATION	protein_coding	-	CCDS40020.1	-	358	0	0	1.5	28.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000051451	Crebzf	ENSMUST00000107206	ENSMUSP00000102824	TRANSLATION	nonsense_mediated_decay	-	-	2	129	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000207252	ENSMUSP00000146596	TRANSLATION	nonsense_mediated_decay	start	-	3	72	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000208379	ENSMUSP00000146363	TRANSLATION	nonsense_mediated_decay	start	-	3	70	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000107205	ENSMUSP00000102823	TRANSLATION	nonsense_mediated_decay	start	-	5	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000143408	ENSMUSP00000146879	TRANSLATION	nonsense_mediated_decay	-	-	2	125	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051451	Crebzf	ENSMUST00000209102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040511	Pvr	ENSMUST00000159261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040511	Pvr	ENSMUST00000160572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040511	Pvr	ENSMUST00000208861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040511	Pvr	ENSMUST00000043517	ENSMUSP00000039205	TRANSLATION	protein_coding	-	CCDS20916.1	1	408	0	3.82	0.5	134.4	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000040511	Pvr	ENSMUST00000159413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047603	Zfp235	ENSMUST00000056549	ENSMUSP00000050803	TRANSLATION	protein_coding	-	CCDS39825.1	1	702	60	1.6	0.5	374.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047603	Zfp235	ENSMUST00000205740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047603	Zfp235	ENSMUST00000205834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047603	Zfp235	ENSMUST00000205680	ENSMUSP00000145993	TRANSLATION	protein_coding	stop	-	1	332	0	1	0	67.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047603	Zfp235	ENSMUST00000206809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047603	Zfp235	ENSMUST00000205736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066241	Olfr514	ENSMUST00000084754	ENSMUSP00000081807	TRANSLATION	protein_coding	-	CCDS21727.1	-	310	0	0.42	3.9	192.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000070423	Olfr558	ENSMUST00000094124	ENSMUSP00000091674	TRANSLATION	protein_coding	-	CCDS21543.1	1	317	0	0.2	6.5	388.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095976	Gm5891	ENSMUST00000179493	ENSMUSP00000137391	TRANSLATION	protein_coding	-	CCDS39816.1	-	313	16	0.8	0.5	236.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095976	Gm5891	ENSMUST00000186212	ENSMUSP00000140803	TRANSLATION	protein_coding	-	CCDS39816.1	1	313	16	0.8	0.5	236.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000115302	Gm49394	ENSMUST00000228850	ENSMUSP00000153765	TRANSLATION	protein_coding,RT	-	-	-	346	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000060688	Olfr292	ENSMUST00000080165	ENSMUSP00000079060	TRANSLATION	protein_coding	-	CCDS21435.1	2	308	0	0.2	1.5	161.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058743	Kcnj14	ENSMUST00000210232	ENSMUSP00000147448	TRANSLATION	protein_coding	stop	-	3	169	0	1	0	168.4	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000058743	Kcnj14	ENSMUST00000071937	ENSMUSP00000071829	TRANSLATION	protein_coding	-	CCDS21265.1	1	434	0	3	2.7	480.2	2	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030421	Uri1	ENSMUST00000205918	ENSMUSP00000145882	TRANSLATION	protein_coding	start	-	5	94	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030421	Uri1	ENSMUST00000205927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030421	Uri1	ENSMUST00000205809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030421	Uri1	ENSMUST00000206327	ENSMUSP00000145978	TRANSLATION	protein_coding	start	-	5	526	0	0	0	54.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030421	Uri1	ENSMUST00000085513	ENSMUSP00000082646	TRANSLATION	protein_coding	-	CCDS21157.1	1	531	0	0	0.5	54.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030421	Uri1	ENSMUST00000206581	ENSMUSP00000145738	TRANSLATION	protein_coding	start	-	1	533	0	0	0	53.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000030421	Uri1	ENSMUST00000206169	ENSMUSP00000146321	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038406	Scaf1	ENSMUST00000209521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038406	Scaf1	ENSMUST00000085383	ENSMUSP00000082501	TRANSLATION	protein_coding	-	CCDS21225.1	1	1256	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038406	Scaf1	ENSMUST00000211680	ENSMUSP00000147712	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038406	Scaf1	ENSMUST00000211735	ENSMUSP00000148251	TRANSLATION	protein_coding	-	CCDS21225.1	1	1256	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038406	Scaf1	ENSMUST00000210056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038406	Scaf1	ENSMUST00000209989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042219	Olfr631	ENSMUST00000106863	ENSMUSP00000102476	TRANSLATION	protein_coding	-	CCDS21597.1	-	319	0	0.36	0.5	378.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003437	Paf1	ENSMUST00000122857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000146886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000003529	ENSMUSP00000003529	TRANSLATION	protein_coding	-	CCDS21043.1	1	535	0	2.95	1.5	504	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003437	Paf1	ENSMUST00000146913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000132910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000154823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000146604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000145339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000152512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003437	Paf1	ENSMUST00000143201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095929	Olfr487	ENSMUST00000081996	ENSMUSP00000080657	TRANSLATION	protein_coding	-	CCDS21708.1	-	314	0	0.2	2.7	168.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095929	Olfr487	ENSMUST00000216489	ENSMUSP00000149407	TRANSLATION	protein_coding	-	CCDS21708.1	5	314	0	0.2	2.7	168.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040907	Atp1a3	ENSMUST00000196684	ENSMUSP00000143735	TRANSLATION	protein_coding	-	-	5	1026	26	21.23	7.5	453.6	8	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000040907	Atp1a3	ENSMUST00000125444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040907	Atp1a3	ENSMUST00000080882	ENSMUSP00000079691	TRANSLATION	protein_coding	-	CCDS20969.2	1	1013	26	20.83	7.5	453.6	8	-4,-5	-	-	20.202	PRINCIPAL:2
ENSMUSG00000040907	Atp1a3	ENSMUST00000102858	ENSMUSP00000099922	TRANSLATION	protein_coding	-	-	2	1053	26	20.5	0.5	453.6	8	-4,-5	-	-	16.542	MINOR
ENSMUSG00000040907	Atp1a3	ENSMUST00000146595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039202	Abhd2	ENSMUST00000135333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039202	Abhd2	ENSMUST00000037315	ENSMUSP00000038361	TRANSLATION	protein_coding	-	CCDS21380.1	1	425	5	0	10.8	100	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000058886	Deaf1	ENSMUST00000080553	ENSMUSP00000079395	TRANSLATION	protein_coding	-	CCDS40185.1	1	566	8	3.97	7.5	131	0	-3,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000058886	Deaf1	ENSMUST00000210816	ENSMUSP00000148125	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0.85	0	39.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000211537	ENSMUSP00000147728	TRANSLATION	protein_coding	-	-	2	575	7	2.92	0.5	117.2	0	-3,-5	-	-	14.322	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000211146	ENSMUSP00000147600	TRANSLATION	nonsense_mediated_decay	start	-	3	81	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000209397	ENSMUSP00000147576	TRANSLATION	nonsense_mediated_decay	start	-	3	116	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000209600	ENSMUSP00000147326	TRANSLATION	protein_coding	start	-	2	132	2	1.22	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000210830	ENSMUSP00000147631	TRANSLATION	nonsense_mediated_decay	-	-	1	308	0	1.75	0	93.4	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000210062	ENSMUSP00000148149	TRANSLATION	nonsense_mediated_decay	start	-	1	283	0	1.75	0	93.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058886	Deaf1	ENSMUST00000209608	ENSMUSP00000147786	TRANSLATION	nonsense_mediated_decay	-	-	3	120	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000095275	Vmn1r107	ENSMUST00000179079	ENSMUSP00000136232	TRANSLATION	protein_coding	-	CCDS52077.1	-	307	0	0	1.5	55.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038459	Abhd17c	ENSMUST00000131505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038459	Abhd17c	ENSMUST00000117085	ENSMUSP00000112988	TRANSLATION	protein_coding	-	CCDS21417.2	1	320	3	0.8	1.5	28.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038459	Abhd17c	ENSMUST00000208271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030385	2900092C05Rik	ENSMUST00000032541	ENSMUSP00000032541	TRANSLATION	protein_coding	-	CCDS20811.1	1	184	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000060503	Olfr715	ENSMUST00000076958	ENSMUSP00000076225	TRANSLATION	protein_coding	-	CCDS21686.1	-	315	0	0.32	5.1	193.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000060503	Olfr715	ENSMUST00000214919	ENSMUSP00000150168	TRANSLATION	protein_coding	-	CCDS21686.1	5	315	0	0.32	5.1	193.5	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000090774	Vmn2r74	ENSMUST00000166355	ENSMUSP00000126917	TRANSLATION	protein_coding	-	CCDS52296.1	5	853	4	2.975	0.5	350	9	-2,-5	-	-	15.922	PRINCIPAL:2
ENSMUSG00000090774	Vmn2r74	ENSMUST00000232758	ENSMUSP00000156482	TRANSLATION	protein_coding	-	-	-	829	4	2.66	0	328	9	-2,-5	-	-	13.966	MINOR
ENSMUSG00000090774	Vmn2r74	ENSMUST00000232886	ENSMUSP00000156918	TRANSLATION	protein_coding	-	-	-	850	4	2.975	0.5	351.3	9	-2,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000090774	Vmn2r74	ENSMUST00000233635	ENSMUSP00000156617	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0.2	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000062017	Abca14	ENSMUST00000084640	ENSMUSP00000081690	TRANSLATION	protein_coding	-	CCDS40108.1	1	1683	17	6.76	0.5	389.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062017	Abca14	ENSMUST00000130646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062017	Abca14	ENSMUST00000143257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062017	Abca14	ENSMUST00000207961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062017	Abca14	ENSMUST00000134268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030659	Nucb2	ENSMUST00000182767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030659	Nucb2	ENSMUST00000183175	ENSMUSP00000138741	TRANSLATION	protein_coding	-	-	1	420	8	3.5	7.5	41.9	0	3,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000030659	Nucb2	ENSMUST00000032895	ENSMUSP00000032895	TRANSLATION	protein_coding	-	CCDS52372.1	1	420	8	3.5	7.5	41.9	0	3,-2	-	-	21	PRINCIPAL:2
ENSMUSG00000030659	Nucb2	ENSMUST00000183335	ENSMUSP00000138757	TRANSLATION	nonsense_mediated_decay	start	-	3	57	4	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006019	Dhx34	ENSMUST00000133518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006019	Dhx34	ENSMUST00000128452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006019	Dhx34	ENSMUST00000163968	ENSMUSP00000126915	TRANSLATION	protein_coding	-	CCDS39783.1	1	1145	9	5.98	1.5	146.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000006019	Dhx34	ENSMUST00000094816	ENSMUSP00000092410	TRANSLATION	protein_coding	-	CCDS39783.1	1	1145	9	5.98	1.5	146.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000006019	Dhx34	ENSMUST00000121123	ENSMUSP00000113673	TRANSLATION	protein_coding	-	-	5	1145	9	5.98	1.5	146.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000006019	Dhx34	ENSMUST00000118795	ENSMUSP00000112865	TRANSLATION	protein_coding	-	-	5	1145	9	5.98	1.5	146.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000006019	Dhx34	ENSMUST00000119102	ENSMUSP00000113393	TRANSLATION	protein_coding	-	-	5	1145	9	5.98	1.5	146.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000044120	Olfr683	ENSMUST00000209879	ENSMUSP00000148110	TRANSLATION	protein_coding	-	-	5	313	0	0.42	3.5	243.7	5	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000044120	Olfr683	ENSMUST00000061284	ENSMUSP00000060527	TRANSLATION	protein_coding	-	CCDS21642.1	-	319	0	0.42	0.5	243.7	5	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000006599	Gtf2h1	ENSMUST00000165031	ENSMUSP00000129337	TRANSLATION	protein_coding	stop	-	2	144	0	2.75	0	90.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006599	Gtf2h1	ENSMUST00000128420	ENSMUSP00000120008	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	1	0	28	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006599	Gtf2h1	ENSMUST00000107644	ENSMUSP00000103271	TRANSLATION	protein_coding	-	CCDS80729.1	1	553	0	3.55	0.5	150.6	0	-4,-7	-	-	12	MINOR
ENSMUSG00000006599	Gtf2h1	ENSMUST00000144708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006599	Gtf2h1	ENSMUST00000006774	ENSMUSP00000006774	TRANSLATION	protein_coding	-	CCDS21287.1	1	547	0	3.55	12.3	150.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042340	Ctf1	ENSMUST00000206073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042340	Ctf1	ENSMUST00000205655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042340	Ctf1	ENSMUST00000047393	ENSMUSP00000049161	TRANSLATION	protein_coding	-	CCDS21875.1	1	203	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000042340	Ctf1	ENSMUST00000206506	ENSMUSP00000145586	TRANSLATION	protein_coding	-	CCDS85423.1	2	196	0	0	1.5	0	0	-4,-5	-	-	0.244	MINOR
ENSMUSG00000042340	Ctf1	ENSMUST00000206997	ENSMUSP00000146199	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000100254	Trpc2	ENSMUST00000124189	ENSMUSP00000116934	TRANSLATION	protein_coding,RT	-	CCDS52333.1	1	890	0	1.26	0.5	166	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025487	Psmd13	ENSMUST00000125668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025487	Psmd13	ENSMUST00000146875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025487	Psmd13	ENSMUST00000166889	ENSMUSP00000126532	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025487	Psmd13	ENSMUST00000151644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025487	Psmd13	ENSMUST00000026560	ENSMUSP00000026560	TRANSLATION	protein_coding	-	CCDS21990.1	1	376	0	11.33	16.2	45.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025487	Psmd13	ENSMUST00000130462	ENSMUSP00000126160	TRANSLATION	protein_coding	start	-	2	206	0	5.33	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025487	Psmd13	ENSMUST00000129683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025487	Psmd13	ENSMUST00000163610	ENSMUSP00000130580	TRANSLATION	protein_coding	-	-	5	349	0	10.58	1.2	0	0	-4,-5	-	-	4.552	MINOR
ENSMUSG00000025487	Psmd13	ENSMUST00000140411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025487	Psmd13	ENSMUST00000164681	ENSMUSP00000132405	TRANSLATION	protein_coding	-	-	5	241	0	5.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025487	Psmd13	ENSMUST00000165539	ENSMUSP00000130256	TRANSLATION	protein_coding	start/stop	-	5	96	0	1.83	0	29.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074322	Vmn1r132	ENSMUST00000098736	ENSMUSP00000096332	TRANSLATION	protein_coding	-	CCDS52100.1	-	297	0	0	0.5	26.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074405	Zfp865	ENSMUST00000076251	ENSMUSP00000075601	TRANSLATION	protein_coding	-	CCDS20753.1	1	1058	80	0.6	0.5	249.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074405	Zfp865	ENSMUST00000207193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074405	Zfp865	ENSMUST00000207362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074405	Zfp865	ENSMUST00000207845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074405	Zfp865	ENSMUST00000085427	ENSMUSP00000082550	TRANSLATION	protein_coding	-	CCDS71884.1	1	756	44	0	0.5	179.4	0	-4,-5	-	-	1.776	MINOR
ENSMUSG00000030615	Tmem126a	ENSMUST00000207159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030615	Tmem126a	ENSMUST00000208639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030615	Tmem126a	ENSMUST00000153393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030615	Tmem126a	ENSMUST00000136652	ENSMUSP00000115803	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	0	0	102.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030615	Tmem126a	ENSMUST00000032844	ENSMUSP00000032844	TRANSLATION	protein_coding	-	CCDS21447.1	1	196	0	0	2.7	271.4	2	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091867	Cyp2a22	ENSMUST00000206957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091867	Cyp2a22	ENSMUST00000170227	ENSMUSP00000128030	TRANSLATION	protein_coding	-	CCDS52156.1	1	492	30	8.8	5.2	486.4	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000096761	Vmn1r245	ENSMUST00000173886	ENSMUSP00000133606	TRANSLATION	protein_coding	-	CCDS71899.1	-	307	0	0	1.5	54.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096813	Vmn1r126	ENSMUST00000168398	ENSMUSP00000131376	TRANSLATION	protein_coding	-	CCDS52094.1	-	321	0	0	0.5	58.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074111	Mrgpra9	ENSMUST00000179005	ENSMUSP00000136396	TRANSLATION	protein_coding	-	CCDS57550.2	5	332	0	0.42	0.5	42.4	7	-1,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000074111	Mrgpra9	ENSMUST00000098436	ENSMUSP00000096035	TRANSLATION	protein_coding	-	-	5	331	0	0.42	0.5	42.4	7	-2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000003865	Gys1	ENSMUST00000210563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003865	Gys1	ENSMUST00000209640	ENSMUSP00000147424	TRANSLATION	protein_coding	start	-	3	177	9	3.45	0	319.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003865	Gys1	ENSMUST00000003964	ENSMUSP00000003964	TRANSLATION	protein_coding	-	CCDS21244.1	1	738	29	12.78	6.3	1210.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003865	Gys1	ENSMUST00000210715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003865	Gys1	ENSMUST00000209230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003865	Gys1	ENSMUST00000211150	ENSMUSP00000148252	TRANSLATION	protein_coding	-	-	5	674	26	11.78	2.4	1076.4	0	-4,-5	-	-	8.532	MINOR
ENSMUSG00000036634	Mag	ENSMUST00000191081	ENSMUSP00000139881	TRANSLATION	protein_coding	-	-	1	627	0	8.15	7.6	110	0	2,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000036634	Mag	ENSMUST00000188569	ENSMUSP00000140526	TRANSLATION	protein_coding	stop	-	1	567	0	6.9	0	86.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000036634	Mag	ENSMUST00000186422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036634	Mag	ENSMUST00000190638	ENSMUSP00000140578	TRANSLATION	protein_coding	stop	-	2	168	0	3.4	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000036634	Mag	ENSMUST00000187137	ENSMUSP00000139564	TRANSLATION	protein_coding	-	CCDS21115.1	1	582	0	8.15	6.4	110	0	2,-2	-	-	14.454	PRINCIPAL:2
ENSMUSG00000036634	Mag	ENSMUST00000190950	ENSMUSP00000139861	TRANSLATION	protein_coding	stop	-	5	64	0	1.4	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000036634	Mag	ENSMUST00000191486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036634	Mag	ENSMUST00000040548	ENSMUSP00000041464	TRANSLATION	protein_coding	-	CCDS21115.1	1	582	0	8.15	6.4	110	0	2,-2	-	-	14.454	PRINCIPAL:2
ENSMUSG00000011658	Fuz	ENSMUST00000207426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011658	Fuz	ENSMUST00000208600	ENSMUSP00000146696	TRANSLATION	nonsense_mediated_decay	-	-	1	192	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000207485	ENSMUSP00000147169	TRANSLATION	protein_coding	-	-	5	379	0	0	1.2	0	0	-4,-7	-	-	0.076	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000207154	ENSMUSP00000147105	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000209163	ENSMUSP00000146977	TRANSLATION	protein_coding	start/stop	-	1	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000207833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011658	Fuz	ENSMUST00000208908	ENSMUSP00000146725	TRANSLATION	nonsense_mediated_decay	start	-	5	77	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000207939	ENSMUSP00000146820	TRANSLATION	protein_coding	stop	-	5	191	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000209039	ENSMUSP00000146681	TRANSLATION	protein_coding	-	-	5	349	0	0	2.7	0	0	-4,-7	-	-	0.642	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000207480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011658	Fuz	ENSMUST00000208291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011658	Fuz	ENSMUST00000207069	ENSMUSP00000146404	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000071207	ENSMUSP00000071194	TRANSLATION	protein_coding	-	CCDS52237.1	1	415	0	0	6.3	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000011658	Fuz	ENSMUST00000208179	ENSMUSP00000146768	TRANSLATION	protein_coding	-	-	5	387	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000011658	Fuz	ENSMUST00000209132	ENSMUSP00000146434	TRANSLATION	protein_coding	-	-	1	169	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000035211	Xrra1	ENSMUST00000036155	ENSMUSP00000035929	TRANSLATION	protein_coding	-	CCDS52321.1	1	786	0	3.465	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035211	Xrra1	ENSMUST00000208270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035211	Xrra1	ENSMUST00000207855	ENSMUSP00000147177	TRANSLATION	protein_coding	-	-	5	361	0	3.465	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000035211	Xrra1	ENSMUST00000208354	ENSMUSP00000146815	TRANSLATION	nonsense_mediated_decay	-	-	5	129	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035211	Xrra1	ENSMUST00000208449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046541	Zfp526	ENSMUST00000055604	ENSMUSP00000053567	TRANSLATION	protein_coding	-	CCDS20975.1	1	675	52	0.14	0.5	128	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047371	Zfp768	ENSMUST00000205266	ENSMUSP00000145704	TRANSLATION	protein_coding	-	-	5	565	40	0.4	1.5	266	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000047371	Zfp768	ENSMUST00000060783	ENSMUSP00000055374	TRANSLATION	protein_coding	-	CCDS21864.1	1	568	40	0.4	0.5	266	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000074165	Zfp788	ENSMUST00000140964	ENSMUSP00000116050	TRANSLATION	protein_coding	stop	-	1	300	16	1.4	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074165	Zfp788	ENSMUST00000154942	ENSMUSP00000119819	TRANSLATION	protein_coding	stop	-	2	25	0	0	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074165	Zfp788	ENSMUST00000045720	ENSMUSP00000035499	TRANSLATION	protein_coding	-	-	1	864	92	2.68	1.5	529.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074165	Zfp788	ENSMUST00000100275	ENSMUSP00000097847	TRANSLATION	protein_coding	-	CCDS39922.1	1	832	92	1.6	1.5	447.5	0	-4,-5	-	-	10.674	MINOR
ENSMUSG00000074165	Zfp788	ENSMUST00000098508	ENSMUSP00000096108	TRANSLATION	protein_coding	-	-	1	884	92	2.68	0.5	529.3	0	-4,-7	-	-	18	PRINCIPAL:5
ENSMUSG00000074165	Zfp788	ENSMUST00000170770	ENSMUSP00000132848	TRANSLATION	protein_coding	-	CCDS39922.1	1	832	92	1.6	1.5	447.5	0	-4,-5	-	-	10.674	MINOR
ENSMUSG00000074165	Zfp788	ENSMUST00000131180	ENSMUSP00000114542	TRANSLATION	protein_coding	stop	-	3	139	0	1.88	0	81.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025105	Bnc1	ENSMUST00000026096	ENSMUSP00000026096	TRANSLATION	protein_coding	-	CCDS52285.1	1	990	15	0	1.5	51.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000074129	Rpl13a	ENSMUST00000209212	ENSMUSP00000147958	TRANSLATION	nonsense_mediated_decay	start	-	5	110	0	2.15	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000209626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074129	Rpl13a	ENSMUST00000210931	ENSMUSP00000147282	TRANSLATION	protein_coding	start	-	5	69	0	0.912	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000210967	ENSMUSP00000147866	TRANSLATION	nonsense_mediated_decay	-	-	5	148	0	3.28	0	32.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000209815	ENSMUSP00000148031	TRANSLATION	protein_coding	start/stop	-	5	167	0	3.577	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000209711	ENSMUSP00000147909	TRANSLATION	protein_coding	-	-	3	131	0	0.912	0	0	0	-4,-2	-	-	0.042	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000209965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074129	Rpl13a	ENSMUST00000209927	ENSMUSP00000148262	TRANSLATION	protein_coding	start	-	5	177	0	3.292	0	19.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000211037	ENSMUSP00000148139	TRANSLATION	protein_coding	start	-	5	133	0	3.13	0	34	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000210134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074129	Rpl13a	ENSMUST00000210073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074129	Rpl13a	ENSMUST00000211438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074129	Rpl13a	ENSMUST00000211494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074129	Rpl13a	ENSMUST00000209812	ENSMUSP00000147986	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	1.35	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000210918	ENSMUSP00000147877	TRANSLATION	protein_coding	stop	-	5	122	0	3.112	0	28.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074129	Rpl13a	ENSMUST00000150350	ENSMUSP00000115722	TRANSLATION	protein_coding	-	CCDS21230.1	1	203	0	3.892	10.8	33	0	-4,-7	-	-	14.826	PRINCIPAL:1
ENSMUSG00000074129	Rpl13a	ENSMUST00000210792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074129	Rpl13a	ENSMUST00000209967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074129	Rpl13a	ENSMUST00000210191	ENSMUSP00000147520	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	2.15	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045039	Megf8	ENSMUST00000128119	ENSMUSP00000122192	TRANSLATION	protein_coding	-	CCDS52148.1	1	2789	9	5.28	3.9	285.7	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000045039	Megf8	ENSMUST00000153077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074221	Zfp568	ENSMUST00000148442	ENSMUSP00000118387	TRANSLATION	protein_coding	-	CCDS21077.1	1	671	44	1.6	0.5	378.2	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000074221	Zfp568	ENSMUST00000209185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074221	Zfp568	ENSMUST00000146074	ENSMUSP00000118823	TRANSLATION	protein_coding	-	CCDS52176.1	1	670	44	1.6	0.5	378.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000074221	Zfp568	ENSMUST00000207940	ENSMUSP00000147124	TRANSLATION	protein_coding	stop	-	5	131	0	1	0	84.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074221	Zfp568	ENSMUST00000177931	ENSMUSP00000137438	TRANSLATION	protein_coding	-	CCDS52176.1	5	670	44	1.6	0.5	378.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000074221	Zfp568	ENSMUST00000074322	ENSMUSP00000073930	TRANSLATION	protein_coding	-	CCDS21077.1	5	671	44	1.6	0.5	378.2	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000164710	ENSMUSP00000130964	TRANSLATION	protein_coding	-	-	1	483	27	3.03	0.5	250	0	-4,-7	-	-	18	MINOR
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000165667	ENSMUSP00000127695	TRANSLATION	protein_coding	-	-	1	422	27	3.03	0	219.4	0	-4,-5	-	-	16.164	MINOR
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000168825	ENSMUSP00000132685	TRANSLATION	nonsense_mediated_decay	start	-	5	112	0	0	0	35.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000167965	ENSMUSP00000132100	TRANSLATION	protein_coding	-	CCDS21893.2	1	461	27	3.03	5.1	250	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000205654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000070656	ENSMUSP00000068529	TRANSLATION	protein_coding	-	-	1	444	27	3.03	3.6	250	0	-4,-5	-	-	19.268	ALTERNATIVE:2
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000166755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000206691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000169919	ENSMUSP00000131705	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000171888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000170115	ENSMUSP00000129958	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030782	Tgfb1i1	ENSMUST00000163553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038503	Mesd	ENSMUST00000094215	ENSMUSP00000091768	TRANSLATION	protein_coding	-	CCDS21415.1	1	224	0	3.33	1.5	272.6	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038503	Mesd	ENSMUST00000130103	ENSMUSP00000114218	TRANSLATION	protein_coding	stop	-	5	154	0	2	0	183.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000038503	Mesd	ENSMUST00000207373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038503	Mesd	ENSMUST00000138803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038503	Mesd	ENSMUST00000153377	ENSMUSP00000115696	TRANSLATION	nonsense_mediated_decay	start	-	3	77	0	1	0	30.3	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000108348	Gm42372	ENSMUST00000206129	ENSMUSP00000148171	TRANSLATION	protein_coding	-	-	-	204	0	0	0	151.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049350	Zg16	ENSMUST00000205559	ENSMUSP00000145957	TRANSLATION	protein_coding	stop	-	3	104	2	2	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000049350	Zg16	ENSMUST00000051122	ENSMUSP00000056916	TRANSLATION	protein_coding	-	CCDS21856.1	1	167	7	3	3.9	26.5	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000049350	Zg16	ENSMUST00000205424	ENSMUSP00000145876	TRANSLATION	protein_coding	-	CCDS21856.1	2	167	7	3	3.9	26.5	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000049350	Zg16	ENSMUST00000205623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047517	Dmbt1	ENSMUST00000213064	ENSMUSP00000148657	TRANSLATION	protein_coding	-	-	5	1783	24	12.4366	0	1268	0	0,-4	-	-	10.62	MINOR
ENSMUSG00000047517	Dmbt1	ENSMUST00000208311	ENSMUSP00000146685	TRANSLATION	protein_coding	-	CCDS85436.1	1	1957	24	13.1266	0.5	1383.1	0	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000047517	Dmbt1	ENSMUST00000209015	ENSMUSP00000146345	TRANSLATION	protein_coding	start	-	2	423	4	2.94	0	269.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047517	Dmbt1	ENSMUST00000084509	ENSMUSP00000081556	TRANSLATION	protein_coding	-	CCDS21909.1	1	1946	24	13.1266	0.5	1383.1	0	0,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000047517	Dmbt1	ENSMUST00000209167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047517	Dmbt1	ENSMUST00000208860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091045	Vmn2r55	ENSMUST00000172743	ENSMUSP00000133483	TRANSLATION	protein_coding	-	CCDS57494.1	5	781	7	3.68	0.5	392.8	8	-4,-6	-	-	13.002	MINOR
ENSMUSG00000091045	Vmn2r55	ENSMUST00000232880	ENSMUSP00000156454	TRANSLATION	protein_coding	-	-	-	811	7	4.33	0	454.4	8	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000091045	Vmn2r55	ENSMUST00000233763	ENSMUSP00000156395	TRANSLATION	protein_coding	-	-	-	773	7	3.68	0.5	454.4	8	-4,-6	-	-	16.698	MINOR
ENSMUSG00000091045	Vmn2r55	ENSMUST00000167771	ENSMUSP00000132834	TRANSLATION	protein_coding	stop	-	5	469	7	2.85	0	192.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000101638	Scgb1b11	ENSMUST00000186031	ENSMUSP00000140214	TRANSLATION	protein_coding	-	-	5	93	0	1.33	0.5	57.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094682	Gm6902	ENSMUST00000179072	ENSMUSP00000136627	TRANSLATION	protein_coding	-	CCDS57522.1	1	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094682	Gm6902	ENSMUST00000191169	ENSMUSP00000140400	TRANSLATION	protein_coding	-	CCDS57522.1	1	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019158	Tmem160	ENSMUST00000209536	ENSMUSP00000147418	TRANSLATION	nonsense_mediated_decay	-	-	2	70	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000019158	Tmem160	ENSMUST00000019302	ENSMUSP00000019302	TRANSLATION	protein_coding	-	CCDS20849.1	1	188	0	0	7.5	0	0	-4,0	-	-	3	PRINCIPAL:1
ENSMUSG00000038797	Zscan2	ENSMUST00000205361	ENSMUSP00000146233	TRANSLATION	protein_coding	stop	-	5	69	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038797	Zscan2	ENSMUST00000132163	ENSMUSP00000118774	TRANSLATION	protein_coding	stop	-	3	145	0	0.6	0	73.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038797	Zscan2	ENSMUST00000044115	ENSMUSP00000042321	TRANSLATION	protein_coding	-	CCDS21399.1	1	614	56	2.2	1.5	436.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038797	Zscan2	ENSMUST00000147125	ENSMUSP00000121143	TRANSLATION	protein_coding	stop	-	1	452	33	1.6	0	295.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038797	Zscan2	ENSMUST00000155128	ENSMUSP00000117886	TRANSLATION	protein_coding	stop	-	1	188	0	0.6	0	73.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070817	Vmn1r85	ENSMUST00000094829	ENSMUSP00000092424	TRANSLATION	protein_coding	-	CCDS20827.1	-	308	0	0	0.5	119.6	5	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000070817	Vmn1r85	ENSMUST00000209822	ENSMUSP00000148178	TRANSLATION	protein_coding	-	CCDS20827.1	2	308	0	0	0.5	119.6	5	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000070817	Vmn1r85	ENSMUST00000235753	ENSMUSP00000157899	TRANSLATION	protein_coding	-	CCDS20827.1	-	308	0	0	0.5	119.6	5	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074155	Klk5	ENSMUST00000048444	ENSMUSP00000049339	TRANSLATION	protein_coding	-	CCDS21185.1	1	293	13	4	1.5	222.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000074155	Klk5	ENSMUST00000205919	ENSMUSP00000145643	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000074003	Gucy2d	ENSMUST00000205350	ENSMUSP00000145913	TRANSLATION	protein_coding	start	-	3	178	1	3.64	0	183	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074003	Gucy2d	ENSMUST00000098274	ENSMUSP00000095875	TRANSLATION	protein_coding	start	-	5	1116	1	7.95	0.5	514.7	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000074003	Gucy2d	ENSMUST00000206524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074003	Gucy2d	ENSMUST00000206435	ENSMUSP00000146093	TRANSLATION	protein_coding	-	CCDS85343.1	5	1117	1	7.95	0.5	514.7	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053395	Cacng8	ENSMUST00000182222	ENSMUSP00000138618	TRANSLATION	protein_coding	-	-	5	423	0	3.15	0.5	131.2	2	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053395	Cacng8	ENSMUST00000092351	ENSMUSP00000090005	TRANSLATION	protein_coding	start	-	1	423	0	3.15	0.5	131.2	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000053395	Cacng8	ENSMUST00000203617	ENSMUSP00000145502	TRANSLATION	protein_coding	start	-	-	54	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000129447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041375	Ccdc9	ENSMUST00000144186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041375	Ccdc9	ENSMUST00000150528	ENSMUSP00000133863	TRANSLATION	protein_coding	stop	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000174270	ENSMUSP00000133798	TRANSLATION	protein_coding	stop	-	5	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000131963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041375	Ccdc9	ENSMUST00000118976	ENSMUSP00000114088	TRANSLATION	protein_coding	-	CCDS52039.1	1	589	0	0	0.5	195.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000041375	Ccdc9	ENSMUST00000145519	ENSMUSP00000119694	TRANSLATION	protein_coding	stop	-	5	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000146609	ENSMUSP00000134106	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000172670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041375	Ccdc9	ENSMUST00000146085	ENSMUSP00000134049	TRANSLATION	protein_coding	start/stop	-	5	182	0	0	0	58.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041375	Ccdc9	ENSMUST00000041010	ENSMUSP00000035597	TRANSLATION	protein_coding	-	CCDS39784.2	1	544	0	0	0.5	195.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000041375	Ccdc9	ENSMUST00000124084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041375	Ccdc9	ENSMUST00000137993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041375	Ccdc9	ENSMUST00000148741	ENSMUSP00000122708	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038763	Alpk3	ENSMUST00000107348	ENSMUSP00000102971	TRANSLATION	protein_coding	-	CCDS40004.1	1	1680	4	1.56	0.5	153.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000038763	Alpk3	ENSMUST00000151115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030862	Cpxm2	ENSMUST00000033149	ENSMUSP00000033149	TRANSLATION	protein_coding	-	CCDS21921.1	1	764	7	9.05	1.5	403.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030862	Cpxm2	ENSMUST00000150405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030862	Cpxm2	ENSMUST00000209155	ENSMUSP00000146382	TRANSLATION	protein_coding	start	-	3	78	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030862	Cpxm2	ENSMUST00000127039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030862	Cpxm2	ENSMUST00000136188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109354	Olfr706	ENSMUST00000216085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109354	Olfr706	ENSMUST00000213918	ENSMUSP00000150075	TRANSLATION	protein_coding	-	CCDS21677.1	5	316	0	0.42	6.3	146.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000109354	Olfr706	ENSMUST00000209025	ENSMUSP00000146412	TRANSLATION	protein_coding	-	CCDS21677.1	-	316	0	0.42	6.3	146.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000109354	Olfr706	ENSMUST00000214495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109354	Olfr706	ENSMUST00000216099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109398	Gm3854	ENSMUST00000208865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109398	Gm3854	ENSMUST00000207173	ENSMUSP00000148053	TRANSLATION	protein_coding	-	-	5	495	35	1.4	0	264.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000008193	Spib	ENSMUST00000035323	ENSMUSP00000035539	TRANSLATION	protein_coding	-	CCDS21209.1	1	267	0	1.48	2.7	76.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000008193	Spib	ENSMUST00000098483	ENSMUSP00000096084	TRANSLATION	protein_coding	stop	-	5	284	0	1.48	1.5	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008193	Spib	ENSMUST00000205506	ENSMUSP00000145968	TRANSLATION	protein_coding	stop	-	5	267	0	1.48	2.7	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001829	Clpb	ENSMUST00000147439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001829	Clpb	ENSMUST00000150355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001829	Clpb	ENSMUST00000123870	ENSMUSP00000121861	TRANSLATION	nonsense_mediated_decay	-	-	3	150	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001829	Clpb	ENSMUST00000153473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001829	Clpb	ENSMUST00000136193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001829	Clpb	ENSMUST00000137214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001829	Clpb	ENSMUST00000142803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001829	Clpb	ENSMUST00000106998	ENSMUSP00000102611	TRANSLATION	protein_coding	-	-	5	707	15	9.54	2.7	262.1	0	-4,0	-	-	17.85	ALTERNATIVE:2
ENSMUSG00000001829	Clpb	ENSMUST00000001884	ENSMUSP00000001884	TRANSLATION	protein_coding	-	CCDS21513.1	1	677	15	9.06	2.7	264.6	0	-4,0	-	-	17.04	PRINCIPAL:2
ENSMUSG00000001829	Clpb	ENSMUST00000150832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001829	Clpb	ENSMUST00000209579	ENSMUSP00000148062	TRANSLATION	protein_coding	-	-	1	678	15	9.06	0	264.6	0	-4,0	-	-	17.04	ALTERNATIVE:2
ENSMUSG00000066515	Klk1b3	ENSMUST00000085450	ENSMUSP00000082577	TRANSLATION	protein_coding	-	CCDS21199.1	1	261	11	4.3	0.5	247	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000003379	Cd79a	ENSMUST00000003469	ENSMUSP00000003469	TRANSLATION	protein_coding	-	CCDS20967.1	1	220	0	0	0.5	63.3	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000073965	Olfr568	ENSMUST00000098216	ENSMUSP00000095818	TRANSLATION	protein_coding	-	CCDS21549.1	-	313	0	0.36	4	373.1	0	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000094981	Vmn1r251	ENSMUST00000163096	ENSMUSP00000127012	TRANSLATION	protein_coding	-	CCDS71906.1	-	307	0	0	1.5	59.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078698	Mrgpra3	ENSMUST00000176369	ENSMUSP00000135437	TRANSLATION	protein_coding	-	CCDS21297.2	1	329	0	0.36	0.5	34	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095257	Scgb1b3	ENSMUST00000179481	ENSMUSP00000136099	TRANSLATION	protein_coding	-	CCDS57535.1	1	93	0	1.78	0.5	76.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078752	Scgb1b30	ENSMUST00000108083	ENSMUSP00000103718	TRANSLATION	protein_coding	-	CCDS52201.1	5	92	0	1.264	0.5	70.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063133	Klk1b1	ENSMUST00000078835	ENSMUSP00000077879	TRANSLATION	protein_coding	-	CCDS21190.1	1	261	7	4.3	0.5	235.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000109378	Gm49396	ENSMUST00000163994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109378	Gm49396	ENSMUST00000167042	ENSMUSP00000128886	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	220	4	5.5	6.4	86	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000109378	Gm49396	ENSMUST00000108161	ENSMUSP00000103796	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	146	4	3.5	0	30.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000109378	Gm49396	ENSMUST00000171912	ENSMUSP00000130983	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	220	4	5.5	6.4	86	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000030406	Gipr	ENSMUST00000094790	ENSMUSP00000092384	TRANSLATION	protein_coding	-	CCDS39795.1	5	460	0	9.9	0.5	331.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030406	Gipr	ENSMUST00000206971	ENSMUSP00000145860	TRANSLATION	nonsense_mediated_decay	-	-	1	140	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030406	Gipr	ENSMUST00000206137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030406	Gipr	ENSMUST00000206857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000207933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000207419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000141914	ENSMUSP00000146739	TRANSLATION	nonsense_mediated_decay	-	-	2	74	7	0	0	22.6	0	-2,0	-	-	-1	MINOR
ENSMUSG00000063179	Pstk	ENSMUST00000133284	ENSMUSP00000146724	TRANSLATION	protein_coding	start	-	5	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063179	Pstk	ENSMUST00000128092	ENSMUSP00000146722	TRANSLATION	protein_coding	start	-	3	136	2	1.4	0	47.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063179	Pstk	ENSMUST00000145114	ENSMUSP00000118636	TRANSLATION	nonsense_mediated_decay	-	-	1	267	9	1.4	0	67.5	0	-2,0	-	-	-1	MINOR
ENSMUSG00000063179	Pstk	ENSMUST00000208084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000124672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000148533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063179	Pstk	ENSMUST00000075610	ENSMUSP00000075037	TRANSLATION	protein_coding	-	CCDS21914.1	1	359	9	1.4	1.5	79.6	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000063179	Pstk	ENSMUST00000207489	ENSMUSP00000146708	TRANSLATION	protein_coding	start	-	2	105	1	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000109655	Gm29735	ENSMUST00000209599	ENSMUSP00000148147	TRANSLATION	protein_coding	-	-	-	219	0	0	0.5	44.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052512	Nav2	ENSMUST00000064395	ENSMUSP00000067448	TRANSLATION	protein_coding	-	-	5	2432	7	2.98	0.5	54.4	0	-4,-7	-	-	16.206	MINOR
ENSMUSG00000052512	Nav2	ENSMUST00000184955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052512	Nav2	ENSMUST00000184945	ENSMUSP00000139045	TRANSLATION	protein_coding	-	CCDS71973.1	5	2432	7	2.98	0.5	54.4	0	-4,-7	-	-	16.206	MINOR
ENSMUSG00000052512	Nav2	ENSMUST00000184471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000207743	ENSMUSP00000159080	TRANSLATION	protein_coding	stop	-	3	116	0	2.58	0	51.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052512	Nav2	ENSMUST00000184109	ENSMUSP00000138846	TRANSLATION	protein_coding	start/stop	-	3	296	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052512	Nav2	ENSMUST00000183715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000184336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052512	Nav2	ENSMUST00000184809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000184462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000183531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000184928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000064383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000184544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052512	Nav2	ENSMUST00000183659	ENSMUSP00000139309	TRANSLATION	protein_coding	-	CCDS71972.1	5	2371	7	3.73	0.5	57.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000052512	Nav2	ENSMUST00000184155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052512	Nav2	ENSMUST00000184124	ENSMUSP00000139312	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052512	Nav2	ENSMUST00000184102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063802	Hspbp1	ENSMUST00000206306	ENSMUSP00000145954	TRANSLATION	protein_coding	stop	-	2	211	0	2	0	37.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063802	Hspbp1	ENSMUST00000205952	ENSMUSP00000145960	TRANSLATION	protein_coding	stop	-	5	275	0	3.33	0	37.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063802	Hspbp1	ENSMUST00000079970	ENSMUSP00000078886	TRANSLATION	protein_coding	-	CCDS20740.1	1	357	0	5.83	5.1	37.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063802	Hspbp1	ENSMUST00000206946	ENSMUSP00000146248	TRANSLATION	protein_coding	stop	-	2	256	0	2	0	37.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063802	Hspbp1	ENSMUST00000205474	ENSMUSP00000145614	TRANSLATION	protein_coding	start	-	5	97	0	2.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063802	Hspbp1	ENSMUST00000206708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002771	Grin2d	ENSMUST00000211713	ENSMUSP00000147663	TRANSLATION	protein_coding	-	CCDS21267.1	5	1323	12	10.72	1.5	254.9	3	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000002771	Grin2d	ENSMUST00000211250	ENSMUSP00000147506	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002771	Grin2d	ENSMUST00000002848	ENSMUSP00000002848	TRANSLATION	protein_coding	-	CCDS21267.1	1	1323	12	10.72	1.5	254.9	3	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000058662	Olfr69	ENSMUST00000106878	ENSMUSP00000102491	TRANSLATION	protein_coding	-	CCDS21590.1	5	316	0	0.2	5.1	335.6	0	-3,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000045598	Zfp553	ENSMUST00000205367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045598	Zfp553	ENSMUST00000056232	ENSMUSP00000060967	TRANSLATION	protein_coding	-	CCDS21860.1	1	591	32	0.32	1.5	264.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045598	Zfp553	ENSMUST00000106312	ENSMUSP00000101919	TRANSLATION	protein_coding	-	CCDS21860.1	1	591	32	0.32	1.5	264.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095273	Vmn1r142	ENSMUST00000169697	ENSMUSP00000126410	TRANSLATION	protein_coding	-	CCDS52109.1	-	305	0	0	1.5	52.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000008734	Gprc5b	ENSMUST00000008878	ENSMUSP00000008878	TRANSLATION	protein_coding	-	CCDS21777.1	1	410	0	0.28	0.5	125.8	7	0,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000008734	Gprc5b	ENSMUST00000208394	ENSMUSP00000146777	TRANSLATION	protein_coding	-	CCDS85400.1	1	411	0	0.28	0.5	125.8	7	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000008734	Gprc5b	ENSMUST00000207614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008734	Gprc5b	ENSMUST00000207582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036744	Olfr701	ENSMUST00000075414	ENSMUSP00000074868	TRANSLATION	protein_coding	-	CCDS21672.1	1	316	0	0.3	6.3	156.6	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036744	Olfr701	ENSMUST00000166880	ENSMUSP00000130958	TRANSLATION	protein_coding	-	CCDS21672.1	1	316	0	0.3	6.3	156.6	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036744	Olfr701	ENSMUST00000217739	ENSMUSP00000151783	TRANSLATION	protein_coding	-	CCDS21672.1	1	316	0	0.3	6.3	156.6	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000002985	Apoe	ENSMUST00000174355	ENSMUSP00000134160	TRANSLATION	protein_coding	-	CCDS20912.1	5	311	0	4.43	1.5	192.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000002985	Apoe	ENSMUST00000174064	ENSMUSP00000133302	TRANSLATION	protein_coding	-	CCDS20912.1	1	311	0	4.43	1.5	192.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000002985	Apoe	ENSMUST00000174710	ENSMUSP00000134429	TRANSLATION	protein_coding	-	-	1	71	0	1.43	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000002985	Apoe	ENSMUST00000174144	ENSMUSP00000134622	TRANSLATION	protein_coding	stop	-	2	231	0	3.43	0	157.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000002985	Apoe	ENSMUST00000172808	ENSMUSP00000134558	TRANSLATION	protein_coding	stop	-	3	146	0	2.1	0	98.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000002985	Apoe	ENSMUST00000167646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002985	Apoe	ENSMUST00000173739	ENSMUSP00000133371	TRANSLATION	protein_coding	-	CCDS20912.1	1	311	0	4.43	1.5	192.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000002985	Apoe	ENSMUST00000207525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002985	Apoe	ENSMUST00000174191	ENSMUSP00000133447	TRANSLATION	protein_coding	-	-	2	71	0	1.43	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000002985	Apoe	ENSMUST00000172983	ENSMUSP00000133359	TRANSLATION	protein_coding	stop	-	5	232	0	3.43	0	157.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000002985	Apoe	ENSMUST00000003066	ENSMUSP00000003066	TRANSLATION	protein_coding	-	CCDS20912.1	5	311	0	4.43	1.5	192.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030873	Scnn1b	ENSMUST00000205520	ENSMUSP00000145900	TRANSLATION	nonsense_mediated_decay	-	-	1	502	0	2.78	0	287.4	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030873	Scnn1b	ENSMUST00000033161	ENSMUSP00000033161	TRANSLATION	protein_coding	-	CCDS21804.1	1	638	0	3.53	2.7	361.6	2	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030873	Scnn1b	ENSMUST00000206079	ENSMUSP00000145678	TRANSLATION	protein_coding	stop	-	5	142	0	0.64	0	72.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000044465	Fam160a2	ENSMUST00000118726	ENSMUSP00000112605	TRANSLATION	protein_coding	-	CCDS57575.1	1	791	0	0	3.9	319.2	0	-4,-2	-	-	7	ALTERNATIVE:2
ENSMUSG00000044465	Fam160a2	ENSMUST00000048079	ENSMUSP00000045084	TRANSLATION	protein_coding	-	CCDS57574.1	1	989	0	0	1.5	319.2	0	-4,-2	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000044465	Fam160a2	ENSMUST00000074686	ENSMUSP00000074252	TRANSLATION	protein_coding	-	-	5	909	0	0	0	319.2	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000044465	Fam160a2	ENSMUST00000211549	ENSMUSP00000147759	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044465	Fam160a2	ENSMUST00000179474	ENSMUSP00000137163	TRANSLATION	protein_coding	-	CCDS21649.1	1	975	0	0	1.5	319.2	0	-4,-2	-	-	6.172	PRINCIPAL:3
ENSMUSG00000044465	Fam160a2	ENSMUST00000210972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044465	Fam160a2	ENSMUST00000137158	ENSMUSP00000119184	TRANSLATION	nonsense_mediated_decay	-	-	1	260	0	0	0	129.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044465	Fam160a2	ENSMUST00000210341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044465	Fam160a2	ENSMUST00000122327	ENSMUSP00000112711	TRANSLATION	protein_coding	-	CCDS21649.1	1	975	0	0	1.5	319.2	0	-4,-2	-	-	6.172	PRINCIPAL:3
ENSMUSG00000044465	Fam160a2	ENSMUST00000210448	ENSMUSP00000147323	TRANSLATION	nonsense_mediated_decay	start	-	2	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044465	Fam160a2	ENSMUST00000136298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044465	Fam160a2	ENSMUST00000142559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044465	Fam160a2	ENSMUST00000211013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003435	Supt5	ENSMUST00000208726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003435	Supt5	ENSMUST00000208367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003435	Supt5	ENSMUST00000207879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003435	Supt5	ENSMUST00000003527	ENSMUSP00000003527	TRANSLATION	protein_coding	-	CCDS39857.1	1	1082	0	8.425	1.5	185.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003435	Supt5	ENSMUST00000209105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003435	Supt5	ENSMUST00000208243	ENSMUSP00000147059	TRANSLATION	nonsense_mediated_decay	start	-	3	149	0	2.2	0	101.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003435	Supt5	ENSMUST00000207563	ENSMUSP00000146961	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003435	Supt5	ENSMUST00000209141	ENSMUSP00000147164	TRANSLATION	protein_coding	-	CCDS39857.1	1	1082	0	8.425	1.5	185.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030603	Psmc4	ENSMUST00000134486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030603	Psmc4	ENSMUST00000140053	ENSMUSP00000147018	TRANSLATION	protein_coding	-	-	5	387	13	9.75	1.2	149.8	0	-4,-5	-	-	16.058	MINOR
ENSMUSG00000030603	Psmc4	ENSMUST00000138512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030603	Psmc4	ENSMUST00000126528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030603	Psmc4	ENSMUST00000135482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030603	Psmc4	ENSMUST00000032824	ENSMUSP00000032824	TRANSLATION	protein_coding	-	CCDS21034.1	1	418	13	10.75	15.5	149.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000066838	Zfp772	ENSMUST00000074455	ENSMUSP00000074055	TRANSLATION	protein_coding	-	CCDS20785.1	1	416	32	0.8	1.5	242	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000074283	Zfp109	ENSMUST00000037448	ENSMUSP00000045498	TRANSLATION	protein_coding	-	CCDS39827.1	5	644	52	1.4	0.5	345.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000074283	Zfp109	ENSMUST00000206362	ENSMUSP00000146043	TRANSLATION	protein_coding	-	CCDS39827.1	1	644	52	1.4	0.5	345.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000074283	Zfp109	ENSMUST00000206960	ENSMUSP00000145925	TRANSLATION	protein_coding	-	-	1	652	52	1.4	0	345.4	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000000244	Tspan32	ENSMUST00000154264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000244	Tspan32	ENSMUST00000075172	ENSMUSP00000074667	TRANSLATION	protein_coding	-	CCDS22037.1	1	229	0	2.4	0.5	0	15	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000000244	Tspan32	ENSMUST00000207449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000244	Tspan32	ENSMUST00000105923	ENSMUSP00000101543	TRANSLATION	protein_coding	-	CCDS52461.1	1	167	0	1.5	0.5	0	11	-4,-6	-	-	3.75	MINOR
ENSMUSG00000000244	Tspan32	ENSMUST00000105924	ENSMUSP00000101544	TRANSLATION	protein_coding	-	-	1	179	0	1.9	0	0	11	-4,-6	-	-	4.752	MINOR
ENSMUSG00000000244	Tspan32	ENSMUST00000082008	ENSMUSP00000080668	TRANSLATION	protein_coding	-	CCDS52460.1	1	201	0	2.1	0.5	0	11	-4,-6	-	-	5.25	ALTERNATIVE:2
ENSMUSG00000000244	Tspan32	ENSMUST00000009396	ENSMUSP00000009396	TRANSLATION	protein_coding	-	CCDS52459.1	1	256	0	2.4	1.5	0	16	1,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000000244	Tspan32	ENSMUST00000105925	ENSMUSP00000101545	TRANSLATION	protein_coding	-	-	1	145	0	1.3	0	0	11	-4,-6	-	-	3.252	MINOR
ENSMUSG00000000244	Tspan32	ENSMUST00000145212	ENSMUSP00000116212	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	1	0	0	11	-4,-6	-	-	-1	MINOR
ENSMUSG00000000244	Tspan32	ENSMUST00000207211	ENSMUSP00000146865	TRANSLATION	protein_coding	-	-	5	141	0	0.9	0	0	10	-4,-7	-	-	2.25	MINOR
ENSMUSG00000000244	Tspan32	ENSMUST00000141186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000244	Tspan32	ENSMUST00000143512	ENSMUSP00000115344	TRANSLATION	protein_coding	start/stop	-	5	185	0	1.6	0	0	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000110234	Gm45799	ENSMUST00000211054	ENSMUSP00000148176	TRANSLATION	protein_coding,RT	-	CCDS21657.1	3	100	0	1.466	1.5	56.1	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000110234	Gm45799	ENSMUST00000106785	ENSMUSP00000102397	TRANSLATION	protein_coding,RT	-	-	3	93	0	1.466	0	56.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000106786	ENSMUSP00000102398	TRANSLATION	protein_coding,RT	-	-	3	109	0	1.466	0	56.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000149819	ENSMUSP00000122446	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	68	0	0.466	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000142874	ENSMUSP00000147621	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	100	0	1.466	1.5	56.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000210312	ENSMUSP00000147351	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	38	0	0	0	0	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000210893	ENSMUSP00000147549	TRANSLATION	protein_coding,RT	start	-	1	61	0	0.4	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110234	Gm45799	ENSMUST00000142363	ENSMUSP00000148105	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	100	0	1.466	1.5	56.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000073944	Olfr619	ENSMUST00000215732	ENSMUSP00000150630	TRANSLATION	protein_coding	-	CCDS21581.1	5	320	0	0.42	2.7	350.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073944	Olfr619	ENSMUST00000098196	ENSMUSP00000095798	TRANSLATION	protein_coding	-	CCDS21581.1	-	320	0	0.42	2.7	350.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003752	Itpkc	ENSMUST00000147170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003752	Itpkc	ENSMUST00000003850	ENSMUSP00000003850	TRANSLATION	protein_coding	-	CCDS21015.1	1	678	23	5.75	1.5	135.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000003752	Itpkc	ENSMUST00000206441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003752	Itpkc	ENSMUST00000149067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006335	Tfpt	ENSMUST00000205596	ENSMUSP00000145936	TRANSLATION	protein_coding	stop	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006335	Tfpt	ENSMUST00000058880	ENSMUSP00000053108	TRANSLATION	nonsense_mediated_decay	start	-	5	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006335	Tfpt	ENSMUST00000156194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006335	Tfpt	ENSMUST00000206370	ENSMUSP00000146255	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006335	Tfpt	ENSMUST00000155592	ENSMUSP00000123636	TRANSLATION	protein_coding	-	CCDS20720.1	1	249	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000006335	Tfpt	ENSMUST00000108641	ENSMUSP00000104281	TRANSLATION	protein_coding	-	CCDS71873.1	1	259	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000006335	Tfpt	ENSMUST00000153143	ENSMUSP00000120930	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073943	Olfr625-ps1	ENSMUST00000190218	ENSMUSP00000140044	TRANSLATION	protein_coding	start/stop	-	-	309	0	0.36	0	363.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000073943	Olfr625-ps1	ENSMUST00000098195	ENSMUSP00000095797	TRANSLATION	protein_coding	-	-	-	321	0	0.36	2.7	363.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062861	Zfp28	ENSMUST00000208949	ENSMUSP00000146936	TRANSLATION	nonsense_mediated_decay	start	-	5	30	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062861	Zfp28	ENSMUST00000208338	ENSMUSP00000147043	TRANSLATION	protein_coding	start	-	5	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062861	Zfp28	ENSMUST00000207465	ENSMUSP00000146738	TRANSLATION	protein_coding	start	-	3	171	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062861	Zfp28	ENSMUST00000207086	ENSMUSP00000147010	TRANSLATION	nonsense_mediated_decay	start	-	2	58	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062861	Zfp28	ENSMUST00000081022	ENSMUSP00000079812	TRANSLATION	protein_coding	-	CCDS39752.1	1	825	56	1.93	0.5	335.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062861	Zfp28	ENSMUST00000207809	ENSMUSP00000147150	TRANSLATION	protein_coding	start	-	3	56	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000094462	Gm21028	ENSMUST00000179470	ENSMUSP00000136464	TRANSLATION	protein_coding	start/stop	-	-	41	5	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096773	Olfr675	ENSMUST00000214318	ENSMUSP00000150456	TRANSLATION	protein_coding	-	-	5	317	0	0.36	2.2	392	6	-4,-6	-	-	12.444	MINOR
ENSMUSG00000096773	Olfr675	ENSMUST00000210113	ENSMUSP00000147900	TRANSLATION	protein_coding	-	-	5	317	0	0.36	2.2	392	6	-4,-6	-	-	12.444	MINOR
ENSMUSG00000096773	Olfr675	ENSMUST00000215899	ENSMUSP00000149895	TRANSLATION	protein_coding	-	-	5	317	0	0.36	2.2	392	6	-4,-6	-	-	12.444	MINOR
ENSMUSG00000096773	Olfr675	ENSMUST00000073102	ENSMUSP00000072847	TRANSLATION	protein_coding	-	CCDS21636.1	-	313	0	0.36	6.4	392	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000090751	Vmn2r63	ENSMUST00000233726	ENSMUSP00000156618	TRANSLATION	protein_coding	-	-	-	802	3	3.57	0	395.5	9	2,-3	-	-	13.8	MINOR
ENSMUSG00000090751	Vmn2r63	ENSMUST00000233303	ENSMUSP00000156576	TRANSLATION	protein_coding	-	-	-	783	3	3.17	0	394.8	9	2,-3	-	-	12.96	MINOR
ENSMUSG00000090751	Vmn2r63	ENSMUST00000232761	ENSMUSP00000156900	TRANSLATION	protein_coding	-	-	-	461	0	1.3	0	139.2	0	2,-3	-	-	0.258	MINOR
ENSMUSG00000090751	Vmn2r63	ENSMUST00000163803	ENSMUSP00000129089	TRANSLATION	protein_coding	-	CCDS52220.1	5	859	3	4.17	0.5	395.5	9	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000035704	Alg8	ENSMUST00000149031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035704	Alg8	ENSMUST00000098300	ENSMUSP00000095901	TRANSLATION	protein_coding	-	CCDS52313.1	1	526	0	0	7.5	565.5	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000035704	Alg8	ENSMUST00000130111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035704	Alg8	ENSMUST00000147297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035704	Alg8	ENSMUST00000154107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035704	Alg8	ENSMUST00000137105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002205	Vrk3	ENSMUST00000171821	ENSMUSP00000132748	TRANSLATION	protein_coding	stop	-	3	119	4	0	0	29.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002205	Vrk3	ENSMUST00000135783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002205	Vrk3	ENSMUST00000136069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002205	Vrk3	ENSMUST00000134750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002205	Vrk3	ENSMUST00000125705	ENSMUSP00000122114	TRANSLATION	protein_coding	stop	-	3	46	4	0	0	29.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002205	Vrk3	ENSMUST00000165957	ENSMUSP00000131704	TRANSLATION	protein_coding	stop	-	5	204	4	2.58	0	29.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002205	Vrk3	ENSMUST00000144515	ENSMUSP00000119073	TRANSLATION	protein_coding	stop	-	5	175	4	2.66	0	29.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002205	Vrk3	ENSMUST00000208083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002205	Vrk3	ENSMUST00000002275	ENSMUSP00000002275	TRANSLATION	protein_coding	-	CCDS21214.1	1	453	4	9.16	0.5	64.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000002205	Vrk3	ENSMUST00000147952	ENSMUSP00000130331	TRANSLATION	nonsense_mediated_decay	-	-	1	170	4	1	0	29.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096859	Vmn1r176	ENSMUST00000171073	ENSMUSP00000132168	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000226767	ENSMUSP00000153990	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000228793	ENSMUSP00000153879	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000226319	ENSMUSP00000154663	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000227129	ENSMUSP00000153764	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000227661	ENSMUSP00000154128	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000096859	Vmn1r176	ENSMUST00000228280	ENSMUSP00000153851	TRANSLATION	protein_coding	-	CCDS52136.1	-	304	0	0	1.5	71.6	3	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030982	Vps35l	ENSMUST00000131162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000175922	ENSMUSP00000134956	TRANSLATION	protein_coding	start	-	1	245	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030982	Vps35l	ENSMUST00000176197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000059390	ENSMUSP00000051263	TRANSLATION	protein_coding	-	CCDS21776.2	1	991	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000030982	Vps35l	ENSMUST00000208483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000149749	ENSMUSP00000121323	TRANSLATION	protein_coding	start/stop	-	5	203	0	0	0	23.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030982	Vps35l	ENSMUST00000129334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030982	Vps35l	ENSMUST00000136623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000033280	ENSMUSP00000033280	TRANSLATION	protein_coding	-	-	1	728	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000030982	Vps35l	ENSMUST00000106553	ENSMUSP00000102163	TRANSLATION	protein_coding	start	-	5	940	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030982	Vps35l	ENSMUST00000146350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000175730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000148586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000106552	ENSMUSP00000102162	TRANSLATION	protein_coding	start	-	5	874	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030982	Vps35l	ENSMUST00000209103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030982	Vps35l	ENSMUST00000175952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055193	Klk15	ENSMUST00000206955	ENSMUSP00000145717	TRANSLATION	protein_coding	start	-	5	171	13	2.33	0	128.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055193	Klk15	ENSMUST00000068625	ENSMUSP00000066969	TRANSLATION	protein_coding	-	CCDS21187.1	1	254	17	4.594	1.5	234.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030397	Mark4	ENSMUST00000239292	ENSMUSP00000159279	TRANSLATION	protein_coding	-	-	-	688	18	8.9	5.1	282.4	0	-4,-6	-	-	17.246	MINOR
ENSMUSG00000030397	Mark4	ENSMUST00000209011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030397	Mark4	ENSMUST00000208650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030397	Mark4	ENSMUST00000209058	ENSMUSP00000147002	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030397	Mark4	ENSMUST00000085715	ENSMUSP00000082862	TRANSLATION	protein_coding	-	CCDS20903.1	1	752	18	8.9	5.1	328.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000030397	Mark4	ENSMUST00000207767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025503	Taldo1	ENSMUST00000026576	ENSMUSP00000026576	TRANSLATION	protein_coding	-	CCDS22011.1	1	337	13	7.33	17	343.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025503	Taldo1	ENSMUST00000125597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025503	Taldo1	ENSMUST00000211759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025503	Taldo1	ENSMUST00000141793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025503	Taldo1	ENSMUST00000211654	ENSMUSP00000147332	TRANSLATION	protein_coding	-	-	5	382	13	7.33	0	331.1	0	-4,-7	-	-	17.268	MINOR
ENSMUSG00000060974	Olfr530	ENSMUST00000216727	ENSMUSP00000149475	TRANSLATION	protein_coding	-	CCDS21974.1	5	307	0	0.36	1.5	162.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060974	Olfr530	ENSMUST00000074177	ENSMUSP00000073808	TRANSLATION	protein_coding	-	CCDS21974.1	-	307	0	0.36	1.5	162.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070847	Vmn2r30	ENSMUST00000072475	ENSMUSP00000072296	TRANSLATION	protein_coding	-	CCDS51994.1	5	852	0	2.68	1.5	381.4	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070847	Vmn2r30	ENSMUST00000232929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070847	Vmn2r30	ENSMUST00000174368	ENSMUSP00000134223	TRANSLATION	protein_coding	-	-	2	580	0	2.2	0	159.9	0	2,-3	-	-	4.926	MINOR
ENSMUSG00000058685	Vmn2r51	ENSMUST00000233179	ENSMUSP00000156941	TRANSLATION	nonsense_mediated_decay	-	-	-	100	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000058685	Vmn2r51	ENSMUST00000094863	ENSMUSP00000092459	TRANSLATION	protein_coding	-	CCDS52007.1	5	852	0	3.38	0.5	373.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062773	Tex101	ENSMUST00000078001	ENSMUSP00000077150	TRANSLATION	protein_coding	-	CCDS20959.1	1	250	0	0	1.5	47.3	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000062773	Tex101	ENSMUST00000206390	ENSMUSP00000146082	TRANSLATION	protein_coding	stop	-	1	194	0	0	0	32.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000062773	Tex101	ENSMUST00000205488	ENSMUSP00000146186	TRANSLATION	protein_coding	stop	-	1	194	0	0	0	32.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000094545	Vmn1r101	ENSMUST00000164245	ENSMUSP00000129819	TRANSLATION	protein_coding	-	CCDS52073.1	-	307	0	0	1.5	52.3	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000060402	Chst8	ENSMUST00000154629	ENSMUSP00000123498	TRANSLATION	protein_coding	-	-	5	123	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000060402	Chst8	ENSMUST00000205390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060402	Chst8	ENSMUST00000135295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060402	Chst8	ENSMUST00000205259	ENSMUSP00000145646	TRANSLATION	protein_coding	-	CCDS21142.1	5	417	0	0	1.5	200.8	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060402	Chst8	ENSMUST00000238947	ENSMUSP00000159050	TRANSLATION	protein_coding	-	CCDS21142.1	-	417	0	0	1.5	200.8	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060402	Chst8	ENSMUST00000206207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060402	Chst8	ENSMUST00000078686	ENSMUSP00000077752	TRANSLATION	protein_coding	-	CCDS21142.1	1	417	0	0	1.5	200.8	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038539	Atf5	ENSMUST00000107893	ENSMUSP00000103525	TRANSLATION	protein_coding	-	CCDS21215.1	1	283	0	0.8	2.7	47	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038539	Atf5	ENSMUST00000047356	ENSMUSP00000047771	TRANSLATION	protein_coding	-	CCDS21215.1	1	283	0	0.8	2.7	47	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038539	Atf5	ENSMUST00000209072	ENSMUSP00000146755	TRANSLATION	protein_coding	-	-	5	75	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000061723	Tnnt3	ENSMUST00000144259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061723	Tnnt3	ENSMUST00000105952	ENSMUSP00000101572	TRANSLATION	protein_coding	-	CCDS52453.1	1	259	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105941	ENSMUSP00000101561	TRANSLATION	protein_coding	-	CCDS85474.1	1	248	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000153262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061723	Tnnt3	ENSMUST00000105954	ENSMUSP00000101574	TRANSLATION	protein_coding	-	CCDS52456.1	1	263	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000074187	ENSMUSP00000073815	TRANSLATION	protein_coding	-	CCDS22031.1	1	248	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000061723	Tnnt3	ENSMUST00000078497	ENSMUSP00000077587	TRANSLATION	protein_coding	-	CCDS52454.1	1	268	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105944	ENSMUSP00000101564	TRANSLATION	protein_coding	-	CCDS85473.1	1	250	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105947	ENSMUSP00000101567	TRANSLATION	protein_coding	-	-	5	259	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000169299	ENSMUSP00000127854	TRANSLATION	protein_coding	-	CCDS85471.1	5	254	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000179658	ENSMUSP00000136278	TRANSLATION	protein_coding	-	CCDS52452.1	1	272	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105946	ENSMUSP00000101566	TRANSLATION	protein_coding	-	CCDS85471.1	1	254	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105942	ENSMUSP00000101562	TRANSLATION	protein_coding	-	CCDS85477.1	1	239	0	5.5	3.9	116.9	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105945	ENSMUSP00000101565	TRANSLATION	protein_coding	-	CCDS22031.1	1	248	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000061723	Tnnt3	ENSMUST00000105953	ENSMUSP00000101573	TRANSLATION	protein_coding	-	CCDS85475.1	1	262	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000180152	ENSMUSP00000137111	TRANSLATION	protein_coding	-	-	5	272	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000128294	ENSMUSP00000116223	TRANSLATION	protein_coding	stop	-	5	107	0	2.1	0	48.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061723	Tnnt3	ENSMUST00000105958	ENSMUSP00000101578	TRANSLATION	protein_coding	-	CCDS52451.1	1	272	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000209807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061723	Tnnt3	ENSMUST00000105955	ENSMUSP00000101575	TRANSLATION	protein_coding	-	CCDS52455.1	1	255	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000146804	ENSMUSP00000116087	TRANSLATION	protein_coding	start/stop	-	5	214	0	4.7	0	116.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061723	Tnnt3	ENSMUST00000105948	ENSMUSP00000101568	TRANSLATION	protein_coding	-	CCDS85472.1	1	250	0	5.4	1.5	116.9	0	-4,-5	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105949	ENSMUSP00000101569	TRANSLATION	protein_coding	-	CCDS52457.1	5	244	0	5.5	3.9	116.9	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105957	ENSMUSP00000101577	TRANSLATION	protein_coding	-	-	5	259	0	5.5	0	116.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000105950	ENSMUSP00000101570	TRANSLATION	protein_coding	-	-	5	262	0	5.5	1.5	116.9	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000061723	Tnnt3	ENSMUST00000125649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061723	Tnnt3	ENSMUST00000105943	ENSMUSP00000101563	TRANSLATION	protein_coding	-	CCDS85476.1	1	239	0	5.4	2.7	116.9	0	-4,-5	-	-	12.388	ALTERNATIVE:2
ENSMUSG00000064264	Zfp428	ENSMUST00000177205	ENSMUSP00000135750	TRANSLATION	protein_coding	-	CCDS71912.1	1	189	4	0	1.5	0	0	-4,-5	-	-	4	ALTERNATIVE:2
ENSMUSG00000064264	Zfp428	ENSMUST00000071361	ENSMUSP00000071318	TRANSLATION	protein_coding	-	CCDS20952.1	1	176	3	0	1.5	0	0	-4,-5	-	-	3	PRINCIPAL:3
ENSMUSG00000064264	Zfp428	ENSMUST00000176880	ENSMUSP00000135601	TRANSLATION	protein_coding	stop	-	5	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064264	Zfp428	ENSMUST00000177228	ENSMUSP00000135772	TRANSLATION	protein_coding	stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040583	Cyp2b13	ENSMUST00000005669	ENSMUSP00000005669	TRANSLATION	protein_coding	-	CCDS21000.2	1	491	35	9	0.5	499.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030621	Me3	ENSMUST00000159167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030621	Me3	ENSMUST00000160995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030621	Me3	ENSMUST00000032856	ENSMUSP00000032856	TRANSLATION	protein_coding	-	CCDS21443.1	1	604	30	13.68	4.1	612.2	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000030621	Me3	ENSMUST00000159491	ENSMUSP00000146505	TRANSLATION	nonsense_mediated_decay	start	-	1	71	4	1.33	0	47.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030621	Me3	ENSMUST00000032853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030621	Me3	ENSMUST00000162145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030621	Me3	ENSMUST00000159504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096871	Gm10665	ENSMUST00000098720	ENSMUSP00000096316	TRANSLATION	protein_coding	-	CCDS52114.1	-	321	0	0	0.5	59.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095984	Vmn1r256	ENSMUST00000174775	ENSMUSP00000133911	TRANSLATION	protein_coding	-	CCDS71910.1	-	306	0	0	1.5	57.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000090471	Gm4553	ENSMUST00000210925	ENSMUSP00000147863	TRANSLATION	protein_coding	-	-	-	284	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000090471	Gm4553	ENSMUST00000168049	ENSMUSP00000131778	TRANSLATION	protein_coding	start/stop	-	-	238	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000208526	ENSMUSP00000147153	TRANSLATION	nonsense_mediated_decay	-	-	1	367	0	0	0	192.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000207354	ENSMUSP00000147242	TRANSLATION	protein_coding	stop	-	3	228	0	0	0	192.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000208509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000059438	ENSMUSP00000050128	TRANSLATION	protein_coding	-	CCDS40159.1	1	444	0	0	1.5	192.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000207305	ENSMUSP00000146800	TRANSLATION	protein_coding	start/stop	-	5	139	0	0	0	94.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040177	2310057M21Rik	ENSMUST00000207117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023072	Cep89	ENSMUST00000155137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023072	Cep89	ENSMUST00000129064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023072	Cep89	ENSMUST00000125041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023072	Cep89	ENSMUST00000148166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023072	Cep89	ENSMUST00000152020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023072	Cep89	ENSMUST00000206230	ENSMUSP00000145618	TRANSLATION	nonsense_mediated_decay	start	-	3	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023072	Cep89	ENSMUST00000079414	ENSMUSP00000078383	TRANSLATION	protein_coding	-	CCDS39911.1	1	791	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000023072	Cep89	ENSMUST00000141704	ENSMUSP00000121393	TRANSLATION	nonsense_mediated_decay	-	-	1	639	0	0	1	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000023072	Cep89	ENSMUST00000206854	ENSMUSP00000145536	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000023072	Cep89	ENSMUST00000150421	ENSMUSP00000121422	TRANSLATION	protein_coding	start	-	3	199	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023072	Cep89	ENSMUST00000140418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030996	Art1	ENSMUST00000210211	ENSMUSP00000148204	TRANSLATION	nonsense_mediated_decay	-	-	1	101	0	0.4	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000030996	Art1	ENSMUST00000209809	ENSMUSP00000147911	TRANSLATION	nonsense_mediated_decay	-	-	1	325	15	0.88	0.5	322.1	1	0,-3	-	-	-1	MINOR
ENSMUSG00000030996	Art1	ENSMUST00000033300	ENSMUSP00000033300	TRANSLATION	protein_coding	-	CCDS21526.1	1	325	15	0.88	0.5	322.1	1	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000030560	Ctsc	ENSMUST00000131108	ENSMUSP00000147006	TRANSLATION	protein_coding	-	CCDS85332.1	1	137	0	2	3.9	100.7	0	3,-2	-	-	1	MINOR
ENSMUSG00000030560	Ctsc	ENSMUST00000032779	ENSMUSP00000032779	TRANSLATION	protein_coding	-	CCDS21438.1	1	462	4	7	1.5	362.8	0	3,-2	-	-	16.172	PRINCIPAL:1
ENSMUSG00000030560	Ctsc	ENSMUST00000139159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030560	Ctsc	ENSMUST00000152834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030560	Ctsc	ENSMUST00000128791	ENSMUSP00000119503	TRANSLATION	protein_coding	stop	-	5	254	1	5	0	156.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000063177	Klk1b27	ENSMUST00000079859	ENSMUSP00000078786	TRANSLATION	protein_coding	-	CCDS21194.1	1	263	7	4.3	0.5	235.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000061119	Prcp	ENSMUST00000076052	ENSMUSP00000075429	TRANSLATION	protein_coding	-	CCDS21452.1	1	491	2	8.7	0.5	309.4	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000061119	Prcp	ENSMUST00000208686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061119	Prcp	ENSMUST00000207594	ENSMUSP00000146597	TRANSLATION	protein_coding	-	-	1	456	2	7.7	0	271.6	0	3,-2	-	-	9.734	MINOR
ENSMUSG00000061119	Prcp	ENSMUST00000207992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061119	Prcp	ENSMUST00000208103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025484	Bet1l	ENSMUST00000209318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025484	Bet1l	ENSMUST00000211624	ENSMUSP00000147264	TRANSLATION	protein_coding	-	-	3	88	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000025484	Bet1l	ENSMUST00000210157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025484	Bet1l	ENSMUST00000209320	ENSMUSP00000147913	TRANSLATION	nonsense_mediated_decay	-	-	2	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025484	Bet1l	ENSMUST00000210710	ENSMUSP00000147378	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025484	Bet1l	ENSMUST00000026557	ENSMUSP00000026557	TRANSLATION	protein_coding	-	CCDS21987.1	1	111	0	0	10	0	1	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000025484	Bet1l	ENSMUST00000210195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025484	Bet1l	ENSMUST00000211590	ENSMUSP00000147377	TRANSLATION	protein_coding	stop	-	5	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025484	Bet1l	ENSMUST00000211527	ENSMUSP00000147777	TRANSLATION	protein_coding	-	-	5	92	0	0	1.2	0	1	-4,-5	-	-	0.066	MINOR
ENSMUSG00000078768	Zfp566	ENSMUST00000088785	ENSMUSP00000086164	TRANSLATION	protein_coding	-	CCDS52177.1	1	386	28	1.6	1.5	242.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078768	Zfp566	ENSMUST00000182248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093986	Vmn1r120	ENSMUST00000105202	ENSMUSP00000100837	TRANSLATION	protein_coding	-	CCDS52088.1	-	305	0	0	1.5	50.6	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000037974	Muc5ac	ENSMUST00000041924	ENSMUSP00000039699	TRANSLATION	protein_coding	-	CCDS40189.1	5	2751	0	3.4	0.5	985	0	3,-2	-	-	6	MINOR
ENSMUSG00000037974	Muc5ac	ENSMUST00000163321	ENSMUSP00000131681	TRANSLATION	protein_coding	-	-	5	2751	0	3.4	0.5	985	0	3,-2	-	-	6	MINOR
ENSMUSG00000037974	Muc5ac	ENSMUST00000155534	ENSMUSP00000122353	TRANSLATION	protein_coding	-	-	5	3455	0	3.4	0	1137.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030629	Zfand6	ENSMUST00000207865	ENSMUSP00000146682	TRANSLATION	protein_coding	stop	-	5	188	10	2.33	0	49.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030629	Zfand6	ENSMUST00000209165	ENSMUSP00000146878	TRANSLATION	protein_coding	stop	-	5	217	12	2.93	0	86.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030629	Zfand6	ENSMUST00000207975	ENSMUSP00000146559	TRANSLATION	protein_coding	stop	-	5	55	4	1	0	49.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030629	Zfand6	ENSMUST00000208831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030629	Zfand6	ENSMUST00000209117	ENSMUSP00000146518	TRANSLATION	protein_coding	-	CCDS21419.1	1	223	12	2.93	1.5	86.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030629	Zfand6	ENSMUST00000208782	ENSMUSP00000147192	TRANSLATION	protein_coding	stop	-	3	184	8	2.33	0	49.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030629	Zfand6	ENSMUST00000069537	ENSMUSP00000069228	TRANSLATION	protein_coding	-	CCDS21419.1	1	223	12	2.93	1.5	86.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030629	Zfand6	ENSMUST00000178385	ENSMUSP00000135968	TRANSLATION	protein_coding	-	CCDS21419.1	1	223	12	2.93	1.5	86.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030629	Zfand6	ENSMUST00000208519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030629	Zfand6	ENSMUST00000209140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000128018	ENSMUSP00000114445	TRANSLATION	protein_coding	start	-	2	147	6	1.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059851	Kmt5c	ENSMUST00000160480	ENSMUSP00000124663	TRANSLATION	nonsense_mediated_decay	-	-	5	145	1	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059851	Kmt5c	ENSMUST00000152431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000136177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000130200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000130215	ENSMUSP00000119323	TRANSLATION	protein_coding	stop	-	3	164	11	4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059851	Kmt5c	ENSMUST00000129927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000098853	ENSMUSP00000096452	TRANSLATION	protein_coding	-	CCDS20743.2	1	468	23	6.56	0.5	44.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059851	Kmt5c	ENSMUST00000108583	ENSMUSP00000104224	TRANSLATION	protein_coding	-	CCDS20743.2	1	468	23	6.56	0.5	44.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059851	Kmt5c	ENSMUST00000108582	ENSMUSP00000104223	TRANSLATION	protein_coding	-	CCDS20743.2	1	468	23	6.56	0.5	44.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059851	Kmt5c	ENSMUST00000135541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059851	Kmt5c	ENSMUST00000152500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095683	Gm10662	ENSMUST00000168053	ENSMUSP00000129981	TRANSLATION	protein_coding	-	CCDS52126.1	-	313	16	0.8	0.5	236.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095683	Gm10662	ENSMUST00000186928	ENSMUSP00000140018	TRANSLATION	protein_coding	-	CCDS52126.1	1	313	16	0.8	0.5	236.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045659	Plekha7	ENSMUST00000183281	ENSMUSP00000138126	TRANSLATION	protein_coding	start/stop	-	3	207	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000182312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045659	Plekha7	ENSMUST00000206662	ENSMUSP00000145800	TRANSLATION	nonsense_mediated_decay	start	-	5	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000214700	ENSMUSP00000151060	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000182693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045659	Plekha7	ENSMUST00000182511	ENSMUSP00000138544	TRANSLATION	protein_coding	-	CCDS85395.1	2	1056	9	4.44	0.5	66.6	0	-4,-2	-	-	13.368	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000216517	ENSMUSP00000148936	TRANSLATION	protein_coding	stop	-	5	867	9	5.84	0	95.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000183308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045659	Plekha7	ENSMUST00000182487	ENSMUSP00000138214	TRANSLATION	protein_coding	-	-	5	1118	9	5.84	2.4	95.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000045659	Plekha7	ENSMUST00000217046	ENSMUSP00000150646	TRANSLATION	protein_coding	start	-	5	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000084664	ENSMUSP00000081714	TRANSLATION	protein_coding	-	CCDS40099.1	1	1030	1	0.8	0.5	0	0	-4,-6	-	-	0.666	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000182890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045659	Plekha7	ENSMUST00000183057	ENSMUSP00000138490	TRANSLATION	protein_coding	stop	-	3	176	8	3.81	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000181981	ENSMUSP00000138766	TRANSLATION	protein_coding	-	CCDS80791.1	1	1013	9	3.91	0.5	66.6	0	-4,-7	-	-	12.312	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000182549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045659	Plekha7	ENSMUST00000182834	ENSMUSP00000138257	TRANSLATION	protein_coding	-	CCDS85396.1	1	1220	9	4.44	0.5	66.6	0	-4,-7	-	-	13.368	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000205446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045659	Plekha7	ENSMUST00000182443	ENSMUSP00000145894	TRANSLATION	protein_coding	start	-	1	1212	9	4.11	0	66.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045659	Plekha7	ENSMUST00000206097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045659	Plekha7	ENSMUST00000181998	ENSMUSP00000138575	TRANSLATION	protein_coding	-	CCDS85397.1	1	1266	9	5.84	2.9	95.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035004	Igsf6	ENSMUST00000047194	ENSMUSP00000039059	TRANSLATION	protein_coding	-	CCDS21801.1	1	237	0	0.42	1.5	0	0	-2,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046574	Prr12	ENSMUST00000210410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046574	Prr12	ENSMUST00000057293	ENSMUSP00000054702	TRANSLATION	protein_coding	-	CCDS52241.1	5	2035	0	0	0.5	60.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045540	Olfr600	ENSMUST00000056222	ENSMUSP00000053887	TRANSLATION	protein_coding	-	CCDS21569.1	-	314	0	0	6.4	323.4	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000045540	Olfr600	ENSMUST00000215042	ENSMUSP00000148967	TRANSLATION	protein_coding	-	CCDS21569.1	5	314	0	0	6.4	323.4	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000227230	ENSMUSP00000153841	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000227232	ENSMUSP00000154644	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000228145	ENSMUSP00000153921	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000228369	ENSMUSP00000154576	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000057123	ENSMUSP00000061885	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000227534	ENSMUSP00000154770	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046130	Vmn1r184	ENSMUST00000227790	ENSMUSP00000154218	TRANSLATION	protein_coding	-	CCDS52155.1	-	314	0	0	0.5	101.6	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030930	Chst15	ENSMUST00000077472	ENSMUSP00000076682	TRANSLATION	protein_coding	-	CCDS21922.1	1	561	0	1.42	9.5	49.7	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030930	Chst15	ENSMUST00000132508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030930	Chst15	ENSMUST00000207068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030930	Chst15	ENSMUST00000080215	ENSMUSP00000079105	TRANSLATION	protein_coding	-	CCDS21922.1	1	561	0	1.42	9.5	49.7	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000004961	Syt5	ENSMUST00000206023	ENSMUSP00000145723	TRANSLATION	protein_coding	stop	-	2	48	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000004961	Syt5	ENSMUST00000065957	ENSMUSP00000070322	TRANSLATION	protein_coding	-	CCDS20738.1	1	386	22	6.28	2.7	171.3	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000004961	Syt5	ENSMUST00000206933	ENSMUSP00000145980	TRANSLATION	protein_coding	stop	-	5	105	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090824	Olfr1344	ENSMUST00000168341	ENSMUSP00000130328	TRANSLATION	protein_coding	-	CCDS20776.1	-	321	0	0.42	0.5	166.4	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000090824	Olfr1344	ENSMUST00000218906	ENSMUSP00000151666	TRANSLATION	protein_coding	-	CCDS20776.1	5	321	0	0.42	0.5	166.4	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096601	Vmn1r260	ENSMUST00000168392	ENSMUSP00000129454	TRANSLATION	protein_coding	-	CCDS52125.1	-	307	0	0	1.5	56.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030590	Fam98c	ENSMUST00000144795	ENSMUSP00000121796	TRANSLATION	protein_coding	start	-	5	259	0	0	0	175.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030590	Fam98c	ENSMUST00000123416	ENSMUSP00000122992	TRANSLATION	protein_coding	start/stop	-	5	135	0	0	0	63.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030590	Fam98c	ENSMUST00000150431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030590	Fam98c	ENSMUST00000123545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030590	Fam98c	ENSMUST00000134176	ENSMUSP00000120165	TRANSLATION	protein_coding	-	-	2	142	0	0	0	166.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030590	Fam98c	ENSMUST00000153251	ENSMUSP00000117500	TRANSLATION	protein_coding	start	-	3	213	0	0	0	171	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030590	Fam98c	ENSMUST00000164589	ENSMUSP00000131477	TRANSLATION	protein_coding	-	CCDS52167.1	5	344	0	0	1.5	307.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030590	Fam98c	ENSMUST00000147561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030590	Fam98c	ENSMUST00000138084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066273	Olfr33	ENSMUST00000084817	ENSMUSP00000081877	TRANSLATION	protein_coding	-	CCDS21544.1	-	318	0	0.3	5.1	389.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000066273	Olfr33	ENSMUST00000216312	ENSMUSP00000149588	TRANSLATION	protein_coding	-	CCDS21544.1	5	318	0	0.3	5.1	389.9	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000004500	Zfp324	ENSMUST00000210619	ENSMUSP00000147860	TRANSLATION	protein_coding	-	-	3	87	0	0.8	0	72.1	0	-4,-2	-	-	3.426	MINOR
ENSMUSG00000004500	Zfp324	ENSMUST00000124387	ENSMUSP00000123956	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004500	Zfp324	ENSMUST00000128293	ENSMUSP00000124620	TRANSLATION	nonsense_mediated_decay	-	-	1	75	0	0.8	0	75.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000004500	Zfp324	ENSMUST00000038701	ENSMUSP00000041944	TRANSLATION	protein_coding	-	CCDS20819.1	1	583	36	1.4	1.5	264.8	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031068	Glrx3	ENSMUST00000064404	ENSMUSP00000066621	TRANSLATION	protein_coding	-	CCDS21948.1	1	337	22	8.3	1.5	192.2	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000031068	Glrx3	ENSMUST00000211598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031068	Glrx3	ENSMUST00000211769	ENSMUSP00000147891	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	1.8	0	30.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031068	Glrx3	ENSMUST00000211496	ENSMUSP00000147803	TRANSLATION	protein_coding	-	-	1	374	22	7.8	0	192.2	0	-4,-6	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000031068	Glrx3	ENSMUST00000209696	ENSMUSP00000148144	TRANSLATION	protein_coding	stop	-	3	163	4	4.63	0	85.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000206256	ENSMUSP00000146056	TRANSLATION	protein_coding	start/stop	-	3	200	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000205331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035401	Emsy	ENSMUST00000206813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035401	Emsy	ENSMUST00000205886	ENSMUSP00000145662	TRANSLATION	protein_coding	start/stop	-	5	235	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000205485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035401	Emsy	ENSMUST00000205911	ENSMUSP00000146011	TRANSLATION	protein_coding	-	-	5	1070	0	2.75	0	52.2	0	-4,-5	-	-	7.62	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000205276	ENSMUSP00000145858	TRANSLATION	protein_coding	-	CCDS40028.1	1	1264	0	3.5	0.5	93.5	0	-4,-5	-	-	11.598	PRINCIPAL:2
ENSMUSG00000035401	Emsy	ENSMUST00000206565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035401	Emsy	ENSMUST00000206611	ENSMUSP00000145640	TRANSLATION	protein_coding	stop	-	5	316	0	3.5	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000038359	ENSMUSP00000038216	TRANSLATION	protein_coding	-	-	1	1118	0	3.5	0.5	93.5	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000035401	Emsy	ENSMUST00000205513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035401	Emsy	ENSMUST00000206626	ENSMUSP00000146262	TRANSLATION	protein_coding	start/stop	-	3	246	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035401	Emsy	ENSMUST00000206619	ENSMUSP00000146150	TRANSLATION	protein_coding	stop	-	1	735	0	3.5	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064023	Klk8	ENSMUST00000085461	ENSMUSP00000082588	TRANSLATION	protein_coding	-	CCDS21182.1	1	260	14	5.05	2.7	248.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000064023	Klk8	ENSMUST00000205537	ENSMUSP00000145580	TRANSLATION	protein_coding	stop	-	2	228	14	3.8	0	215.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000064023	Klk8	ENSMUST00000206465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057321	Usp17ld	ENSMUST00000073394	ENSMUSP00000073107	TRANSLATION	protein_coding	-	CCDS21567.1	1	545	8	0.42	0.5	176.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074158	Zfp976	ENSMUST00000187616	ENSMUSP00000141023	TRANSLATION	protein_coding	start	-	5	635	72	2.15	0.5	359.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074158	Zfp976	ENSMUST00000098503	ENSMUSP00000096105	TRANSLATION	protein_coding	-	CCDS57543.1	2	636	72	2.15	0.5	359.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074158	Zfp976	ENSMUST00000107994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030881	Arfip2	ENSMUST00000209550	ENSMUSP00000147808	TRANSLATION	protein_coding	-	-	5	337	0	5.83	8.8	270.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000030881	Arfip2	ENSMUST00000157028	ENSMUSP00000119837	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000084782	ENSMUSP00000081840	TRANSLATION	protein_coding	-	CCDS21656.1	5	341	0	5.83	8.8	270.4	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000030881	Arfip2	ENSMUST00000131446	ENSMUSP00000120387	TRANSLATION	protein_coding	-	CCDS21656.1	1	341	0	5.83	8.8	270.4	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000030881	Arfip2	ENSMUST00000210911	ENSMUSP00000147995	TRANSLATION	protein_coding	-	-	5	267	0	3.58	0.5	178	0	-4,-5	-	-	1.956	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000133519	ENSMUSP00000121649	TRANSLATION	protein_coding	stop	-	5	209	0	3.08	0	114.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000142173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030881	Arfip2	ENSMUST00000033171	ENSMUSP00000033171	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000134613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030881	Arfip2	ENSMUST00000127853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030881	Arfip2	ENSMUST00000137931	ENSMUSP00000118616	TRANSLATION	nonsense_mediated_decay	-	-	5	159	0	1	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000127759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030881	Arfip2	ENSMUST00000209870	ENSMUSP00000147307	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	1.75	0	66	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030881	Arfip2	ENSMUST00000126589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006095	Tbcb	ENSMUST00000169358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006095	Tbcb	ENSMUST00000141608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006095	Tbcb	ENSMUST00000006254	ENSMUSP00000006254	TRANSLATION	protein_coding	-	CCDS21083.1	1	244	0	5.39	7.5	181.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000123321	ENSMUSP00000114167	TRANSLATION	protein_coding	stop	-	3	54	0	1.525	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000151706	ENSMUSP00000115077	TRANSLATION	protein_coding	stop	-	5	156	10	4.275	0	159.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000123630	ENSMUSP00000121947	TRANSLATION	protein_coding	stop	-	2	54	0	1.355	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000106985	ENSMUSP00000102598	TRANSLATION	protein_coding	-	CCDS21517.1	5	255	16	5.525	1.5	217.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000134145	ENSMUSP00000118547	TRANSLATION	protein_coding	stop	-	3	103	2	2.525	0	84.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000106981	ENSMUSP00000102594	TRANSLATION	protein_coding	-	CCDS21517.1	1	255	16	5.525	1.5	217.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000106982	ENSMUSP00000102595	TRANSLATION	protein_coding	-	CCDS21517.1	3	255	16	5.525	1.5	217.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000126204	ENSMUSP00000117175	TRANSLATION	protein_coding	stop	-	5	137	7	3.775	0	131.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000140584	ENSMUSP00000116068	TRANSLATION	protein_coding	stop	-	2	29	0	0.525	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000125298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001827	Folr1	ENSMUST00000124026	ENSMUSP00000121374	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000140068	ENSMUSP00000114633	TRANSLATION	protein_coding	stop	-	3	160	13	4.525	0	167.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000155311	ENSMUSP00000115360	TRANSLATION	protein_coding	stop	-	3	53	0	1.355	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001827	Folr1	ENSMUST00000106983	ENSMUSP00000102596	TRANSLATION	protein_coding	-	CCDS21517.1	5	255	16	5.525	1.5	217.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000106986	ENSMUSP00000102599	TRANSLATION	protein_coding	-	CCDS21517.1	1	255	16	5.525	1.5	217.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001827	Folr1	ENSMUST00000150184	ENSMUSP00000114919	TRANSLATION	protein_coding	stop	-	1	42	0	1.025	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000004612	Nkg7	ENSMUST00000206741	ENSMUSP00000146071	TRANSLATION	protein_coding	-	-	1	120	0	0	0	0	2	0,-3	-	-	0	MINOR
ENSMUSG00000004612	Nkg7	ENSMUST00000070518	ENSMUSP00000068946	TRANSLATION	protein_coding	-	CCDS21169.1	1	165	0	0	2.7	45.8	4	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000004612	Nkg7	ENSMUST00000206251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047535	Olfr67	ENSMUST00000183254	ENSMUSP00000138389	TRANSLATION	protein_coding	-	CCDS40059.1	5	320	0	0.42	3.9	377.4	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000030654	Arl6ip1	ENSMUST00000204005	ENSMUSP00000145418	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030654	Arl6ip1	ENSMUST00000205182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030654	Arl6ip1	ENSMUST00000203154	ENSMUSP00000144894	TRANSLATION	nonsense_mediated_decay	-	-	3	35	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030654	Arl6ip1	ENSMUST00000206536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030654	Arl6ip1	ENSMUST00000032888	ENSMUSP00000032888	TRANSLATION	protein_coding	-	CCDS21769.1	1	203	0	0	21.5	0	0	-4,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000030654	Arl6ip1	ENSMUST00000206491	ENSMUSP00000146175	TRANSLATION	protein_coding	stop	-	3	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003762	Coq8b	ENSMUST00000142910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003762	Coq8b	ENSMUST00000128090	ENSMUSP00000123309	TRANSLATION	nonsense_mediated_decay	-	-	1	304	0	4.5	0	99.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000003762	Coq8b	ENSMUST00000206312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003762	Coq8b	ENSMUST00000123012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003762	Coq8b	ENSMUST00000143372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003762	Coq8b	ENSMUST00000108378	ENSMUSP00000104015	TRANSLATION	protein_coding	-	CCDS39847.1	1	533	0	9.33	0.5	108.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000003762	Coq8b	ENSMUST00000003860	ENSMUSP00000003860	TRANSLATION	protein_coding	-	CCDS39847.1	1	533	0	9.33	0.5	108.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000096584	Olfr611	ENSMUST00000216074	ENSMUSP00000149114	TRANSLATION	protein_coding	-	CCDS40055.1	5	323	0	0.2	1.5	365.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096584	Olfr611	ENSMUST00000078108	ENSMUSP00000077246	TRANSLATION	protein_coding	-	CCDS40055.1	-	323	0	0.2	1.5	365.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023467	Tulp2	ENSMUST00000210868	ENSMUSP00000147710	TRANSLATION	protein_coding	-	-	1	448	5	5.6	0.5	300.4	0	-4,-6	-	-	11	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000210299	ENSMUSP00000147875	TRANSLATION	protein_coding	stop	-	5	192	0	0	0	48.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000210532	ENSMUSP00000147359	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000210813	ENSMUSP00000147596	TRANSLATION	protein_coding	-	CCDS71961.1	1	457	5	5.435	0.5	294.9	0	-4,-6	-	-	10.67	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000107758	ENSMUSP00000103387	TRANSLATION	protein_coding	-	-	5	457	5	5.435	0.5	294.9	0	-4,-6	-	-	10.67	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000085331	ENSMUSP00000082438	TRANSLATION	protein_coding	-	CCDS80720.1	1	438	5	5.6	0.5	300.4	0	-4,-6	-	-	11	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000211413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023467	Tulp2	ENSMUST00000107762	ENSMUSP00000103391	TRANSLATION	protein_coding	-	CCDS39953.1	1	562	5	5.6	0.5	401.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000023467	Tulp2	ENSMUST00000107759	ENSMUSP00000103388	TRANSLATION	protein_coding	-	CCDS71960.1	1	450	5	5.6	0.5	300.4	0	-4,-6	-	-	11	MINOR
ENSMUSG00000023467	Tulp2	ENSMUST00000024233	ENSMUSP00000024233	TRANSLATION	protein_coding	-	CCDS39954.1	1	562	5	5.6	0.5	401.3	0	-4,-5	-	-	17	PRINCIPAL:5
ENSMUSG00000023467	Tulp2	ENSMUST00000209763	ENSMUSP00000147833	TRANSLATION	protein_coding	stop	-	5	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048469	Olfr564	ENSMUST00000061096	ENSMUSP00000129376	TRANSLATION	protein_coding	-	CCDS52334.1	-	316	0	0.42	2.7	387.2	0	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000003438	Timm50	ENSMUST00000131849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003438	Timm50	ENSMUST00000136427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003438	Timm50	ENSMUST00000135220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003438	Timm50	ENSMUST00000151990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003438	Timm50	ENSMUST00000081946	ENSMUSP00000080614	TRANSLATION	protein_coding	-	CCDS21039.1	1	353	0	3.8	2.7	119.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000003438	Timm50	ENSMUST00000134263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043366	Olfr78	ENSMUST00000209365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043366	Olfr78	ENSMUST00000060187	ENSMUSP00000058085	TRANSLATION	protein_coding	-	CCDS21546.1	1	320	0	0.42	6.3	370.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043366	Olfr78	ENSMUST00000168007	ENSMUSP00000133255	TRANSLATION	protein_coding	-	CCDS21546.1	1	320	0	0.42	6.3	370.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043366	Olfr78	ENSMUST00000217123	ENSMUSP00000149274	TRANSLATION	protein_coding	-	CCDS21546.1	1	320	0	0.42	6.3	370.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000005575	Ube2m	ENSMUST00000138357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005575	Ube2m	ENSMUST00000125964	ENSMUSP00000122638	TRANSLATION	protein_coding	start	-	2	171	0	4	0	133.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005575	Ube2m	ENSMUST00000156389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005575	Ube2m	ENSMUST00000005714	ENSMUSP00000005714	TRANSLATION	protein_coding	-	CCDS20825.1	1	183	0	5	13.7	136.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000005575	Ube2m	ENSMUST00000165394	ENSMUSP00000132604	TRANSLATION	protein_coding	-	CCDS52024.1	5	86	0	2.25	0.5	82.3	0	-4,-5	-	-	3.27	MINOR
ENSMUSG00000005575	Ube2m	ENSMUST00000131837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005575	Ube2m	ENSMUST00000126827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005575	Ube2m	ENSMUST00000123541	ENSMUSP00000120234	TRANSLATION	protein_coding	start	-	3	172	0	3.625	0	95.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073959	Olfr584	ENSMUST00000214215	ENSMUSP00000151043	TRANSLATION	protein_coding	-	-	5	314	0	0	7.1	367.7	7	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000073959	Olfr584	ENSMUST00000098210	ENSMUSP00000095811	TRANSLATION	protein_coding	-	CCDS21560.1	-	319	0	0	0.5	367.7	7	-4,-7	-	-	6	MINOR
ENSMUSG00000094934	Vmn1r163	ENSMUST00000164537	ENSMUSP00000130288	TRANSLATION	protein_coding	-	CCDS52124.1	-	307	0	0	1.5	53.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036459	Wtip	ENSMUST00000205914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036459	Wtip	ENSMUST00000123813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036459	Wtip	ENSMUST00000038537	ENSMUSP00000047623	TRANSLATION	protein_coding	-	CCDS21135.1	1	398	24	3.96	0.5	127.7	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036459	Wtip	ENSMUST00000140911	ENSMUSP00000146103	TRANSLATION	nonsense_mediated_decay	start	-	5	167	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000109396	Gm4565	ENSMUST00000208134	ENSMUSP00000147120	TRANSLATION	protein_coding	-	CCDS85232.1	1	301	16	1	0.5	238.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059772	Slx1b	ENSMUST00000084586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059772	Slx1b	ENSMUST00000142337	ENSMUSP00000117927	TRANSLATION	nonsense_mediated_decay	-	-	1	73	0	0.8	0	33.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000059772	Slx1b	ENSMUST00000155012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059772	Slx1b	ENSMUST00000144897	ENSMUSP00000118182	TRANSLATION	protein_coding	-	CCDS21838.1	1	270	8	3.07	1.5	50.7	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000047026	Acsm4	ENSMUST00000047045	ENSMUSP00000045160	TRANSLATION	protein_coding	-	CCDS21784.1	1	580	20	11.73	1.5	356.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000063511	Snrnp70	ENSMUST00000211178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000210583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000211211	ENSMUSP00000148112	TRANSLATION	protein_coding	start	-	3	84	0	2.382	0	35.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000210374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000209993	ENSMUSP00000147368	TRANSLATION	nonsense_mediated_decay	start	-	3	116	0	3.566	0	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000210970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063511	Snrnp70	ENSMUST00000209858	ENSMUSP00000147636	TRANSLATION	protein_coding	stop	-	5	168	0	4.83	0	151.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000211121	ENSMUSP00000147400	TRANSLATION	protein_coding	stop	-	3	109	0	3	2	102.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000210808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000210661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000074575	ENSMUSP00000074160	TRANSLATION	protein_coding	-	CCDS21240.1	1	448	0	8.69	0.5	166.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063511	Snrnp70	ENSMUST00000211366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000210514	ENSMUSP00000147375	TRANSLATION	protein_coding	start	-	3	86	0	2.316	0	35.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000209237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000210495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063511	Snrnp70	ENSMUST00000211378	ENSMUSP00000147682	TRANSLATION	nonsense_mediated_decay	-	-	5	111	0	2.25	0	88.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063511	Snrnp70	ENSMUST00000211290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074277	Phldb3	ENSMUST00000206422	ENSMUSP00000146187	TRANSLATION	protein_coding	-	CCDS52139.1	5	648	11	1.48	0.5	47	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074277	Phldb3	ENSMUST00000205857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074277	Phldb3	ENSMUST00000073325	ENSMUSP00000073047	TRANSLATION	protein_coding	-	CCDS52139.1	5	648	11	1.48	0.5	47	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074277	Phldb3	ENSMUST00000205330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096691	Vmn2r33	ENSMUST00000165921	ENSMUSP00000129960	TRANSLATION	protein_coding	-	CCDS51997.1	5	861	0	2.74	0.5	390.5	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000060591	Ifitm2	ENSMUST00000081649	ENSMUSP00000071470	TRANSLATION	protein_coding	-	CCDS21994.1	1	144	0	0	1.5	101.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030376	Slc8a2	ENSMUST00000168693	ENSMUSP00000128926	TRANSLATION	protein_coding	-	CCDS85220.1	1	915	19	4.52	0.5	569.3	7	4,-1	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000030376	Slc8a2	ENSMUST00000211649	ENSMUSP00000147497	TRANSLATION	protein_coding	-	CCDS20845.1	1	921	19	4.85	2.7	569.3	7	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000066122	Olfr45	ENSMUST00000084454	ENSMUSP00000081492	TRANSLATION	protein_coding	-	CCDS21983.1	-	311	0	0.32	1.5	169.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066122	Olfr45	ENSMUST00000214637	ENSMUSP00000149309	TRANSLATION	protein_coding	-	CCDS21983.1	3	311	0	0.32	1.5	169.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057177	Gsk3a	ENSMUST00000108411	ENSMUSP00000104049	TRANSLATION	protein_coding	-	-	5	486	18	8.85	0	235.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000057177	Gsk3a	ENSMUST00000071739	ENSMUSP00000071654	TRANSLATION	protein_coding	-	CCDS20976.1	2	490	18	8.85	0.5	235.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000057177	Gsk3a	ENSMUST00000206654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030867	Plk1	ENSMUST00000206470	ENSMUSP00000145631	TRANSLATION	nonsense_mediated_decay	-	-	5	196	18	2	0	116.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030867	Plk1	ENSMUST00000205901	ENSMUSP00000146253	TRANSLATION	protein_coding	start/stop	-	5	194	17	2.5	0	111.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030867	Plk1	ENSMUST00000033154	ENSMUSP00000033154	TRANSLATION	protein_coding	-	CCDS21812.1	1	603	19	9.75	6.3	374.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025586	Cpeb1	ENSMUST00000178892	ENSMUSP00000137079	TRANSLATION	protein_coding	-	CCDS57557.1	1	562	8	6.75	6.4	700.2	0	-4,-5	-	-	19.718	ALTERNATIVE:1
ENSMUSG00000025586	Cpeb1	ENSMUST00000098331	ENSMUSP00000095936	TRANSLATION	protein_coding	-	CCDS40007.1	1	561	8	6.75	6.4	704.9	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000025586	Cpeb1	ENSMUST00000124937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025586	Cpeb1	ENSMUST00000153419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025586	Cpeb1	ENSMUST00000151661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025586	Cpeb1	ENSMUST00000152319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025586	Cpeb1	ENSMUST00000130310	ENSMUSP00000120139	TRANSLATION	protein_coding	start	-	5	551	8	6.75	0	691.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025586	Cpeb1	ENSMUST00000135177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025586	Cpeb1	ENSMUST00000136689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093890	Vmn1r127	ENSMUST00000105199	ENSMUSP00000100834	TRANSLATION	protein_coding	-	CCDS52095.1	-	305	0	0	1.5	56.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000073938	Olfr632	ENSMUST00000214509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073938	Olfr632	ENSMUST00000214711	ENSMUSP00000149598	TRANSLATION	protein_coding	-	CCDS21598.1	5	317	0	0.42	1.7	363.5	5	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000073938	Olfr632	ENSMUST00000098189	ENSMUSP00000095791	TRANSLATION	protein_coding	-	CCDS21598.1	-	317	0	0.42	1.7	363.5	5	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000099581	Scgb1b10	ENSMUST00000187257	ENSMUSP00000139939	TRANSLATION	protein_coding	-	-	5	93	0	1.78	0.5	73.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063903	Klk1	ENSMUST00000206144	ENSMUSP00000146057	TRANSLATION	protein_coding	stop	-	3	151	5	3	0	164.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063903	Klk1	ENSMUST00000075162	ENSMUSP00000074659	TRANSLATION	protein_coding	-	CCDS21202.1	1	261	7	5.63	1.5	254.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000063903	Klk1	ENSMUST00000205329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074406	Zfp628	ENSMUST00000116354	ENSMUSP00000112058	TRANSLATION	protein_coding	-	CCDS51979.1	1	1038	67	0	0.5	281.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040205	Cuzd1	ENSMUST00000046611	ENSMUSP00000037168	TRANSLATION	protein_coding	-	CCDS40157.1	1	607	3	4.24	1.5	295.1	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000038244	Mical2	ENSMUST00000106647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038244	Mical2	ENSMUST00000150428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038244	Mical2	ENSMUST00000033033	ENSMUSP00000033033	TRANSLATION	protein_coding	-	-	1	612	0	0.75	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000144509	ENSMUSP00000123341	TRANSLATION	protein_coding	start	-	3	137	7	1.25	0	36.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000215412	ENSMUSP00000151170	TRANSLATION	nonsense_mediated_decay	start	-	5	77	1	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000106648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038244	Mical2	ENSMUST00000051308	ENSMUSP00000062443	TRANSLATION	protein_coding	-	CCDS52364.1	1	680	0	4.5	0.5	139.6	0	-4,-7	-	-	5.91	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000140202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038244	Mical2	ENSMUST00000106645	ENSMUSP00000102256	TRANSLATION	protein_coding	-	CCDS52364.1	5	680	0	4.5	0.5	139.6	0	-4,-7	-	-	5.91	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000213108	ENSMUSP00000150200	TRANSLATION	protein_coding	start	-	1	572	0	4.5	0	141.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000216652	ENSMUSP00000149026	TRANSLATION	protein_coding	start	-	5	893	1	4.95	0	139.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038244	Mical2	ENSMUST00000037991	ENSMUSP00000047639	TRANSLATION	protein_coding	-	CCDS57581.1	1	1102	38	12.21	2.7	135.7	0	-4,-5	-	-	17.676	ALTERNATIVE:2
ENSMUSG00000038244	Mical2	ENSMUST00000050149	ENSMUSP00000051163	TRANSLATION	protein_coding	-	CCDS21753.1	1	960	38	12.07	1.5	135.7	0	-4,-5	-	-	17.394	PRINCIPAL:3
ENSMUSG00000038973	Cldnd2	ENSMUST00000040227	ENSMUSP00000037980	TRANSLATION	protein_coding	-	CCDS39929.1	1	167	0	0	2.7	62.5	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038973	Cldnd2	ENSMUST00000206839	ENSMUSP00000145638	TRANSLATION	protein_coding	-	CCDS39929.1	2	167	0	0	2.7	62.5	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038300	Pth2	ENSMUST00000042754	ENSMUSP00000041047	TRANSLATION	protein_coding	-	CCDS21233.1	1	100	0	0	5.1	100.1	0	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000038300	Pth2	ENSMUST00000210086	ENSMUSP00000147367	TRANSLATION	protein_coding	-	-	2	113	0	0	1.5	100.1	0	-2,-3	-	-	6.244	MINOR
ENSMUSG00000003123	Lipe	ENSMUST00000105177	ENSMUSP00000100811	TRANSLATION	protein_coding	-	-	-	334	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000003123	Lipe	ENSMUST00000205923	ENSMUSP00000145669	TRANSLATION	nonsense_mediated_decay	start	-	5	180	0	1.4	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003123	Lipe	ENSMUST00000054301	ENSMUSP00000050935	TRANSLATION	protein_coding	-	CCDS20982.1	1	759	3	2.64	0.5	379.3	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000003123	Lipe	ENSMUST00000206861	ENSMUSP00000145665	TRANSLATION	protein_coding	-	CCDS20982.1	1	759	3	2.64	0.5	379.3	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000003123	Lipe	ENSMUST00000003207	ENSMUSP00000003207	TRANSLATION	protein_coding	-	CCDS20981.1	1	802	3	2.64	0.5	379.3	0	-4,-5	-	-	15	PRINCIPAL:4
ENSMUSG00000003123	Lipe	ENSMUST00000206588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003123	Lipe	ENSMUST00000205698	ENSMUSP00000146000	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003123	Lipe	ENSMUST00000149349	ENSMUSP00000123485	TRANSLATION	protein_coding	-	-	5	1072	3	2.64	0	379.3	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000040136	Abcc8	ENSMUST00000210655	ENSMUSP00000148169	TRANSLATION	protein_coding	start	-	1	910	26	23.32	0	322.3	10	-4,-6	-	-	-1	MINOR
ENSMUSG00000040136	Abcc8	ENSMUST00000210511	ENSMUSP00000148198	TRANSLATION	nonsense_mediated_decay	-	-	3	100	0	2	2.2	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000040136	Abcc8	ENSMUST00000210637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040136	Abcc8	ENSMUST00000209432	ENSMUSP00000147431	TRANSLATION	protein_coding	start	-	3	73	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040136	Abcc8	ENSMUST00000033123	ENSMUSP00000033123	TRANSLATION	protein_coding	-	CCDS21275.1	1	1588	26	37.084	0.5	451.3	19	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000040136	Abcc8	ENSMUST00000210770	ENSMUSP00000147925	TRANSLATION	protein_coding	start	-	3	123	2	3.66	0	34.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040136	Abcc8	ENSMUST00000210110	ENSMUSP00000147479	TRANSLATION	protein_coding	start	-	5	158	9	4.674	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040136	Abcc8	ENSMUST00000210986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094602	Vmn1r169	ENSMUST00000226669	ENSMUSP00000153881	TRANSLATION	protein_coding	-	CCDS52132.1	-	304	0	0	1.5	71.2	4	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094602	Vmn1r169	ENSMUST00000227932	ENSMUSP00000153880	TRANSLATION	protein_coding	-	CCDS52132.1	-	304	0	0	1.5	71.2	4	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094602	Vmn1r169	ENSMUST00000170290	ENSMUSP00000126133	TRANSLATION	protein_coding	-	CCDS52132.1	-	304	0	0	1.5	71.2	4	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094602	Vmn1r169	ENSMUST00000228832	ENSMUSP00000154343	TRANSLATION	protein_coding	-	CCDS52132.1	-	304	0	0	1.5	71.2	4	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094602	Vmn1r169	ENSMUST00000227547	ENSMUSP00000154034	TRANSLATION	protein_coding	-	CCDS52132.1	-	304	0	0	1.5	71.2	4	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000073973	Olfr552	ENSMUST00000098223	ENSMUSP00000095826	TRANSLATION	protein_coding	-	CCDS21537.1	-	317	0	0	8.8	389.8	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000073973	Olfr552	ENSMUST00000215712	ENSMUSP00000150317	TRANSLATION	protein_coding	-	CCDS21537.1	5	317	0	0	8.8	389.8	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000044701	Il27	ENSMUST00000058429	ENSMUSP00000054637	TRANSLATION	protein_coding	-	CCDS21835.1	1	234	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000155059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000205462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000124223	ENSMUSP00000118668	TRANSLATION	protein_coding	-	-	1	1584	0	0	0.5	620.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000148701	ENSMUSP00000119527	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000205723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000069660	ENSMUSP00000065744	TRANSLATION	protein_coding	-	CCDS40123.1	1	1610	0	0	0.5	620.1	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000132204	ENSMUSP00000115955	TRANSLATION	protein_coding	start/stop	-	5	219	0	0	0	162.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032743	D430042O09Rik	ENSMUST00000122337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060407	Cyp2a12	ENSMUST00000075552	ENSMUSP00000074990	TRANSLATION	protein_coding	-	CCDS21009.1	1	492	31	8.8	1.5	505.4	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000060407	Cyp2a12	ENSMUST00000207016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007279	Scube2	ENSMUST00000106728	ENSMUSP00000102339	TRANSLATION	protein_coding	-	-	5	805	19	8.04	1.2	465.8	0	3,-2	-	-	12.437	MINOR
ENSMUSG00000007279	Scube2	ENSMUST00000132113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007279	Scube2	ENSMUST00000138946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007279	Scube2	ENSMUST00000106729	ENSMUSP00000102340	TRANSLATION	protein_coding	-	CCDS21740.2	1	968	19	8.84	4.1	474.6	0	3,-2	-	-	15.502	MINOR
ENSMUSG00000007279	Scube2	ENSMUST00000007423	ENSMUSP00000007423	TRANSLATION	protein_coding	-	-	2	997	19	8.84	1.2	532.9	0	3,-2	-	-	18.065	PRINCIPAL:1
ENSMUSG00000066584	Scgb2b27	ENSMUST00000141890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066584	Scgb2b27	ENSMUST00000185399	ENSMUSP00000140711	TRANSLATION	protein_coding	-	CCDS80703.1	2	82	0	1.25	0.5	87	0	1,-2	-	-	10.308	MINOR
ENSMUSG00000066584	Scgb2b27	ENSMUST00000085620	ENSMUSP00000082760	TRANSLATION	protein_coding	-	CCDS52200.1	1	112	0	1.45	0.5	101.4	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000110061	Gm45337	ENSMUST00000210537	ENSMUSP00000147817	TRANSLATION	protein_coding	-	-	-	263	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000005533	Igf1r	ENSMUST00000207621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005533	Igf1r	ENSMUST00000208871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005533	Igf1r	ENSMUST00000005671	ENSMUSP00000005671	TRANSLATION	protein_coding	-	CCDS21355.1	1	1369	18	18.07	5.3	632	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000005533	Igf1r	ENSMUST00000208348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005533	Igf1r	ENSMUST00000207487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005533	Igf1r	ENSMUST00000208731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030935	Acsm3	ENSMUST00000106527	ENSMUSP00000102137	TRANSLATION	protein_coding	-	CCDS21786.1	1	580	20	11.85	3.9	346.5	0	-4,0	-	-	19	PRINCIPAL:2
ENSMUSG00000030935	Acsm3	ENSMUST00000149598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030935	Acsm3	ENSMUST00000106528	ENSMUSP00000102138	TRANSLATION	protein_coding	-	CCDS21786.1	1	580	20	11.85	3.9	346.5	0	-4,0	-	-	19	PRINCIPAL:2
ENSMUSG00000030935	Acsm3	ENSMUST00000154828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030935	Acsm3	ENSMUST00000063770	ENSMUSP00000068803	TRANSLATION	protein_coding	-	CCDS21786.1	1	580	20	11.85	3.9	346.5	0	-4,0	-	-	19	PRINCIPAL:2
ENSMUSG00000030935	Acsm3	ENSMUST00000106529	ENSMUSP00000102139	TRANSLATION	protein_coding	-	-	1	622	20	11.85	0	346.5	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000030935	Acsm3	ENSMUST00000149766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030935	Acsm3	ENSMUST00000106526	ENSMUSP00000102136	TRANSLATION	protein_coding	-	CCDS21786.1	5	580	20	11.85	3.9	346.5	0	-4,0	-	-	19	PRINCIPAL:2
ENSMUSG00000095201	Vmn1r91	ENSMUST00000165330	ENSMUSP00000129283	TRANSLATION	protein_coding	-	CCDS52066.1	-	307	0	0	1.5	58.5	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000047721	Bola2	ENSMUST00000106369	ENSMUSP00000101977	TRANSLATION	protein_coding	-	-	1	54	0	1.75	0	35.9	0	-4,-5	-	-	6.81	MINOR
ENSMUSG00000047721	Bola2	ENSMUST00000052145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047721	Bola2	ENSMUST00000144571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047721	Bola2	ENSMUST00000206275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047721	Bola2	ENSMUST00000130498	ENSMUSP00000114873	TRANSLATION	protein_coding	-	CCDS40129.1	1	86	0	2.75	7.2	71.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078580	E430018J23Rik	ENSMUST00000074249	ENSMUSP00000073867	TRANSLATION	protein_coding	-	-	1	149	0	0.6	0	53	0	-4,-7	-	-	1.896	MINOR
ENSMUSG00000078580	E430018J23Rik	ENSMUST00000165495	ENSMUSP00000126288	TRANSLATION	protein_coding	-	CCDS52407.1	2	461	36	1.9	0.5	283.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000078580	E430018J23Rik	ENSMUST00000106303	ENSMUSP00000101910	TRANSLATION	protein_coding	stop	-	3	130	0	1.1	0	77	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031077	Fadd	ENSMUST00000033394	ENSMUSP00000033394	TRANSLATION	protein_coding	-	CCDS22050.1	1	205	0	2	1.5	143.2	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030871	Ears2	ENSMUST00000147397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030871	Ears2	ENSMUST00000033159	ENSMUSP00000033159	TRANSLATION	protein_coding	-	CCDS21807.1	1	523	18	6.25	2.7	291.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030871	Ears2	ENSMUST00000151530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000237383	ENSMUSP00000158557	TRANSLATION	protein_coding	-	-	-	221	0	0	0	0	8	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000236952	ENSMUSP00000157693	TRANSLATION	protein_coding	-	-	-	267	0	0	0	0	10	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000037220	ENSMUSP00000048665	TRANSLATION	protein_coding	-	-	1	129	0	0	0	0	5	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000206686	ENSMUSP00000145629	TRANSLATION	protein_coding	-	-	1	129	0	0	0	0	5	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000206366	ENSMUSP00000145781	TRANSLATION	protein_coding	start	-	1	172	0	0	0	0	6	0,-3	-	-	-1	MINOR
ENSMUSG00000038782	1700028J19Rik	ENSMUST00000208099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040466	Blvrb	ENSMUST00000207799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040466	Blvrb	ENSMUST00000133750	ENSMUSP00000146130	TRANSLATION	protein_coding	-	-	2	126	22	2.58	0	83.4	0	-4,-7	-	-	5.436	MINOR
ENSMUSG00000040466	Blvrb	ENSMUST00000108358	ENSMUSP00000103995	TRANSLATION	protein_coding	-	-	3	247	21	3	0	90.2	0	-4,-7	-	-	6.684	MINOR
ENSMUSG00000040466	Blvrb	ENSMUST00000037399	ENSMUSP00000043092	TRANSLATION	protein_coding	-	CCDS39848.1	1	206	31	4.58	8.8	126.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000040466	Blvrb	ENSMUST00000108357	ENSMUSP00000103994	TRANSLATION	protein_coding	-	CCDS71922.1	2	120	12	2.83	1.5	58.4	0	-4,-5	-	-	4.632	MINOR
ENSMUSG00000040466	Blvrb	ENSMUST00000153644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070873	Lilra5	ENSMUST00000117550	ENSMUSP00000113091	TRANSLATION	protein_coding	-	CCDS51971.1	1	295	0	2.8	1.5	48	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049583	Grm5	ENSMUST00000208791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049583	Grm5	ENSMUST00000125009	ENSMUSP00000118393	TRANSLATION	protein_coding	-	CCDS40013.1	5	1171	23	7	1.5	658.1	7	1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000049583	Grm5	ENSMUST00000208878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049583	Grm5	ENSMUST00000107263	ENSMUSP00000102884	TRANSLATION	protein_coding	-	CCDS40013.1	1	1171	23	7	1.5	658.1	7	1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000049583	Grm5	ENSMUST00000155358	ENSMUSP00000114927	TRANSLATION	protein_coding	-	CCDS52305.1	1	1203	23	7	1.5	658.1	7	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000049583	Grm5	ENSMUST00000138732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049583	Grm5	ENSMUST00000208776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005609	Ctr9	ENSMUST00000157025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000140220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000146709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000209912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000152019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000143818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000005749	ENSMUSP00000005749	TRANSLATION	protein_coding	-	CCDS21750.1	1	1173	0	6.98	7.5	115.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005609	Ctr9	ENSMUST00000146558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005609	Ctr9	ENSMUST00000123681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038623	Tm6sf1	ENSMUST00000119543	ENSMUSP00000112400	TRANSLATION	protein_coding	-	CCDS80744.1	1	279	0	0	5.1	72.7	10	-4,-7	-	-	7.893	MINOR
ENSMUSG00000038623	Tm6sf1	ENSMUST00000134861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038623	Tm6sf1	ENSMUST00000130006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038623	Tm6sf1	ENSMUST00000126334	ENSMUSP00000121292	TRANSLATION	nonsense_mediated_decay	-	-	1	161	0	0	0	0	6	-3,-5	-	-	-1	MINOR
ENSMUSG00000038623	Tm6sf1	ENSMUST00000041890	ENSMUSP00000038017	TRANSLATION	protein_coding	-	CCDS21408.1	1	370	0	0	7.5	72.7	14	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000038623	Tm6sf1	ENSMUST00000147977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038623	Tm6sf1	ENSMUST00000124616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041836	Ptpre	ENSMUST00000210833	ENSMUSP00000147313	TRANSLATION	protein_coding	-	CCDS21944.1	1	699	22	14.75	5.1	550	2	-2,-5	-	-	19.49	PRINCIPAL:3
ENSMUSG00000041836	Ptpre	ENSMUST00000211140	ENSMUSP00000147957	TRANSLATION	protein_coding	-	CCDS21944.1	1	699	22	14.75	5.1	550	2	-2,-5	-	-	19.49	PRINCIPAL:3
ENSMUSG00000041836	Ptpre	ENSMUST00000209268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041836	Ptpre	ENSMUST00000209256	ENSMUSP00000147656	TRANSLATION	protein_coding	-	CCDS85444.1	1	719	22	14.75	1.7	550	2	-1,-4	-	-	18.254	MINOR
ENSMUSG00000041836	Ptpre	ENSMUST00000209979	ENSMUSP00000147613	TRANSLATION	protein_coding	-	CCDS85446.1	1	642	22	14.75	6.5	550	0	-4,-1	-	-	20	ALTERNATIVE:1
ENSMUSG00000041836	Ptpre	ENSMUST00000211092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041836	Ptpre	ENSMUST00000073961	ENSMUSP00000073616	TRANSLATION	protein_coding	-	CCDS21944.1	1	699	22	14.75	5.1	550	2	-2,-5	-	-	19.49	PRINCIPAL:3
ENSMUSG00000041836	Ptpre	ENSMUST00000211788	ENSMUSP00000147524	TRANSLATION	protein_coding	-	CCDS85445.1	1	712	22	14.75	1.7	550	2	0,-2	-	-	18.254	MINOR
ENSMUSG00000118388	Vmn1r64	ENSMUST00000078475	ENSMUSP00000077568	TRANSLATION	protein_coding	-	CCDS20766.1	-	320	0	0	0.5	65.1	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000095901	Olfr538	ENSMUST00000084457	ENSMUSP00000081495	TRANSLATION	protein_coding	-	CCDS21980.1	-	310	0	0.2	1.5	168.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095901	Olfr538	ENSMUST00000210973	ENSMUSP00000147315	TRANSLATION	protein_coding	-	CCDS21980.1	5	310	0	0.2	1.5	168.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096606	Tpbgl	ENSMUST00000178124	ENSMUSP00000137154	TRANSLATION	protein_coding	-	CCDS57566.1	-	384	0	0.42	1.5	83.4	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000074272	Ceacam1	ENSMUST00000206171	ENSMUSP00000145584	TRANSLATION	protein_coding	-	CCDS39839.1	1	458	0	4.7	0.5	205.2	3	0,-4	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000074272	Ceacam1	ENSMUST00000098668	ENSMUSP00000096265	TRANSLATION	protein_coding	-	CCDS20985.1	1	341	0	2.84	0.5	97.9	3	0,-4	-	-	1.998	MINOR
ENSMUSG00000074272	Ceacam1	ENSMUST00000098669	ENSMUSP00000096266	TRANSLATION	protein_coding	-	CCDS20984.1	5	521	0	4.84	0.5	205.2	3	0,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000074272	Ceacam1	ENSMUST00000206483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074272	Ceacam1	ENSMUST00000206981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074272	Ceacam1	ENSMUST00000205308	ENSMUSP00000146156	TRANSLATION	protein_coding	-	-	1	270	0	2.24	0	97.9	0	0,-4	-	-	0.798	MINOR
ENSMUSG00000074272	Ceacam1	ENSMUST00000206717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074272	Ceacam1	ENSMUST00000206676	ENSMUSP00000145590	TRANSLATION	protein_coding	-	-	1	450	0	4.24	0	205.2	0	0,-4	-	-	10.8	MINOR
ENSMUSG00000074272	Ceacam1	ENSMUST00000098666	ENSMUSP00000096263	TRANSLATION	protein_coding	-	CCDS39839.1	1	458	0	4.7	0.5	205.2	3	0,-4	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000074272	Ceacam1	ENSMUST00000206583	ENSMUSP00000145570	TRANSLATION	nonsense_mediated_decay	-	-	1	236	0	2	0	104.7	0	0,-4	-	-	-1	MINOR
ENSMUSG00000074272	Ceacam1	ENSMUST00000206687	ENSMUSP00000146066	TRANSLATION	protein_coding	-	CCDS85244.1	1	278	0	2.7	0.5	97.9	3	0,-4	-	-	1.722	MINOR
ENSMUSG00000044453	Ffar1	ENSMUST00000052700	ENSMUSP00000055564	TRANSLATION	protein_coding	-	CCDS21113.1	-	300	0	1	7.5	62.8	0	-2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000070550	Mrgprb4	ENSMUST00000094388	ENSMUSP00000091952	TRANSLATION	protein_coding	-	CCDS21301.1	-	321	0	0.36	0.5	41.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030374	Strn4	ENSMUST00000019220	ENSMUSP00000019220	TRANSLATION	protein_coding	-	CCDS39786.1	1	760	0	6.55	5.1	262.4	0	-3,-6	-	-	14	PRINCIPAL:4
ENSMUSG00000030374	Strn4	ENSMUST00000183680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000123510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000184708	ENSMUSP00000139171	TRANSLATION	nonsense_mediated_decay	start	-	5	293	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030374	Strn4	ENSMUST00000185011	ENSMUSP00000139290	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030374	Strn4	ENSMUST00000138070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000123247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000184694	ENSMUSP00000139113	TRANSLATION	protein_coding	start	-	2	198	0	3.36	0	67.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030374	Strn4	ENSMUST00000127835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030374	Strn4	ENSMUST00000134350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000131721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030374	Strn4	ENSMUST00000137885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030374	Strn4	ENSMUST00000184280	ENSMUSP00000139307	TRANSLATION	nonsense_mediated_decay	start	-	5	225	0	1	0	130.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030374	Strn4	ENSMUST00000108495	ENSMUSP00000104135	TRANSLATION	protein_coding	-	CCDS39787.1	1	753	0	6.55	5.1	262.4	0	-3,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000051877	Vmn2r72	ENSMUST00000233546	ENSMUSP00000156491	TRANSLATION	nonsense_mediated_decay	-	-	-	104	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000051877	Vmn2r72	ENSMUST00000063425	ENSMUSP00000133014	TRANSLATION	protein_coding	-	CCDS52294.1	5	856	4	2.64	0.5	351.7	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051877	Vmn2r72	ENSMUST00000233415	ENSMUSP00000156799	TRANSLATION	protein_coding	-	-	-	609	2	2.22	0	143	0	-1,-5	-	-	7.046	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000086502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064179	Tnnt1	ENSMUST00000168111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064179	Tnnt1	ENSMUST00000166161	ENSMUSP00000125795	TRANSLATION	protein_coding	-	-	5	249	0	5.43	1	120.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064179	Tnnt1	ENSMUST00000071798	ENSMUSP00000071704	TRANSLATION	protein_coding	-	CCDS51973.1	1	261	0	5.43	0.5	120.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000064179	Tnnt1	ENSMUST00000166959	ENSMUSP00000129109	TRANSLATION	protein_coding	stop	-	5	191	0	2.93	0	102.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000163722	ENSMUSP00000129409	TRANSLATION	protein_coding	stop	-	2	118	0	1.78	0	41.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000163538	ENSMUSP00000127964	TRANSLATION	protein_coding	stop	-	5	168	0	2.18	0	91.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000163560	ENSMUSP00000132012	TRANSLATION	protein_coding	stop	-	5	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000108587	ENSMUSP00000104228	TRANSLATION	protein_coding	-	CCDS71880.1	1	262	0	5.43	0.5	120.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064179	Tnnt1	ENSMUST00000163710	ENSMUSP00000129626	TRANSLATION	protein_coding	-	CCDS71879.1	1	250	0	5.43	1.5	120.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064179	Tnnt1	ENSMUST00000166268	ENSMUSP00000128476	TRANSLATION	protein_coding	stop	-	5	207	0	3.93	0	120.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064179	Tnnt1	ENSMUST00000178163	ENSMUSP00000137198	TRANSLATION	protein_coding	-	-	5	261	0	5.43	0.5	120.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064179	Tnnt1	ENSMUST00000169571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025104	Hdgfl3	ENSMUST00000107305	ENSMUSP00000102926	TRANSLATION	protein_coding	-	CCDS40011.1	1	202	0	2.7	9.6	55.4	0	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000025104	Hdgfl3	ENSMUST00000149288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025104	Hdgfl3	ENSMUST00000026094	ENSMUSP00000026094	TRANSLATION	protein_coding	-	-	1	205	0	2.7	9.6	55.4	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000074359	Psg23	ENSMUST00000057810	ENSMUSP00000056586	TRANSLATION	protein_coding	-	CCDS20874.1	1	471	0	3.18	0.5	165.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000084174	Sycn	ENSMUST00000119180	ENSMUSP00000112770	TRANSLATION	protein_coding	-	CCDS21048.1	1	134	3	0	4.1	190.2	0	4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000040212	Emp3	ENSMUST00000210937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040212	Emp3	ENSMUST00000038876	ENSMUSP00000037289	TRANSLATION	protein_coding	-	CCDS21270.1	1	163	0	0	0.5	152.2	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040212	Emp3	ENSMUST00000210297	ENSMUSP00000147800	TRANSLATION	protein_coding	-	CCDS21270.1	3	163	0	0	0.5	152.2	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040212	Emp3	ENSMUST00000210939	ENSMUSP00000148129	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	57.9	2	0,-4	-	-	-1	MINOR
ENSMUSG00000040212	Emp3	ENSMUST00000164119	ENSMUSP00000132519	TRANSLATION	protein_coding	-	CCDS21270.1	1	163	0	0	0.5	152.2	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049280	Olfr509	ENSMUST00000215075	ENSMUSP00000150157	TRANSLATION	protein_coding	-	CCDS21723.1	5	321	0	0.2	2.7	144.1	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049280	Olfr509	ENSMUST00000213756	ENSMUSP00000149663	TRANSLATION	protein_coding	-	CCDS21723.1	5	321	0	0.2	2.7	144.1	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049280	Olfr509	ENSMUST00000214861	ENSMUSP00000149575	TRANSLATION	protein_coding	-	CCDS21723.1	5	321	0	0.2	2.7	144.1	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049280	Olfr509	ENSMUST00000061690	ENSMUSP00000053819	TRANSLATION	protein_coding	-	CCDS21723.1	-	321	0	0.2	2.7	144.1	7	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054342	Kcnn4	ENSMUST00000205428	ENSMUSP00000146012	TRANSLATION	protein_coding	-	CCDS20948.1	1	425	0	3.25	6.3	271.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000054342	Kcnn4	ENSMUST00000206910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054342	Kcnn4	ENSMUST00000205626	ENSMUSP00000145873	TRANSLATION	protein_coding	-	-	5	104	0	0	0	79.2	3	-4,-7	-	-	0	MINOR
ENSMUSG00000054342	Kcnn4	ENSMUST00000205881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054342	Kcnn4	ENSMUST00000171904	ENSMUSP00000133065	TRANSLATION	protein_coding	-	CCDS20948.1	1	425	0	3.25	6.3	271.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000074364	Ehd2	ENSMUST00000098799	ENSMUSP00000096397	TRANSLATION	protein_coding	-	CCDS20842.1	1	543	22	6	7.5	107.9	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000074364	Ehd2	ENSMUST00000144956	ENSMUSP00000119933	TRANSLATION	protein_coding	stop	-	2	105	5	2	0	25.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019539	Rcn3	ENSMUST00000210469	ENSMUSP00000147341	TRANSLATION	protein_coding	stop	-	3	274	20	3.16	0	29.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000019539	Rcn3	ENSMUST00000211352	ENSMUSP00000148227	TRANSLATION	protein_coding	-	CCDS21229.1	1	328	23	3.28	7.5	46	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000019539	Rcn3	ENSMUST00000019683	ENSMUSP00000019683	TRANSLATION	protein_coding	-	CCDS21229.1	1	328	23	3.28	7.5	46	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000019539	Rcn3	ENSMUST00000210527	ENSMUSP00000147532	TRANSLATION	protein_coding	stop	-	2	115	4	1	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000019539	Rcn3	ENSMUST00000209761	ENSMUSP00000147975	TRANSLATION	protein_coding	start	-	5	186	18	2.76	0	29.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019539	Rcn3	ENSMUST00000210355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019539	Rcn3	ENSMUST00000210615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019539	Rcn3	ENSMUST00000211760	ENSMUSP00000147762	TRANSLATION	protein_coding	start	-	5	122	12	1.76	0	29.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019539	Rcn3	ENSMUST00000210734	ENSMUSP00000147420	TRANSLATION	protein_coding	stop	-	5	280	20	3.18	0	29.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030539	Sema4b	ENSMUST00000107383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030539	Sema4b	ENSMUST00000123023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030539	Sema4b	ENSMUST00000205822	ENSMUSP00000145622	TRANSLATION	protein_coding	-	CCDS21391.1	1	823	0	9.68	0.5	516.6	1	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000030539	Sema4b	ENSMUST00000032754	ENSMUSP00000032754	TRANSLATION	protein_coding	-	CCDS21391.1	1	823	0	9.68	0.5	516.6	1	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000039013	Siglecf	ENSMUST00000206299	ENSMUSP00000146009	TRANSLATION	protein_coding	-	CCDS85278.1	1	535	0	3.26	0.5	77.6	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000039013	Siglecf	ENSMUST00000121494	ENSMUSP00000112583	TRANSLATION	protein_coding	-	-	1	523	0	3.26	0	77.6	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000039013	Siglecf	ENSMUST00000122423	ENSMUSP00000113245	TRANSLATION	protein_coding	-	CCDS21167.1	1	569	0	3.26	0.5	77.6	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000039013	Siglecf	ENSMUST00000125335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039013	Siglecf	ENSMUST00000145867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039013	Siglecf	ENSMUST00000012798	ENSMUSP00000012798	TRANSLATION	protein_coding	-	CCDS21167.1	1	569	0	3.26	0.5	77.6	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000063535	Zfp773	ENSMUST00000211240	ENSMUSP00000147639	TRANSLATION	protein_coding	-	-	1	185	0	0.8	0	54.2	0	-4,-7	-	-	3.426	MINOR
ENSMUSG00000063535	Zfp773	ENSMUST00000032622	ENSMUSP00000032622	TRANSLATION	protein_coding	-	CCDS51992.1	1	471	32	1.4	0.5	191.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000117853	Vmn1r88	ENSMUST00000236472	ENSMUSP00000158066	TRANSLATION	protein_coding	-	CCDS52026.1	-	316	0	0	0.5	100.7	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000117853	Vmn1r88	ENSMUST00000237109	ENSMUSP00000158479	TRANSLATION	protein_coding	-	CCDS52026.1	-	316	0	0	0.5	100.7	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000117853	Vmn1r88	ENSMUST00000171783	ENSMUSP00000128946	TRANSLATION	protein_coding	-	CCDS52026.1	-	316	0	0	0.5	100.7	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000003184	Irf3	ENSMUST00000207129	ENSMUSP00000147175	TRANSLATION	protein_coding	start	-	2	103	0	1.882	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003184	Irf3	ENSMUST00000207521	ENSMUSP00000146383	TRANSLATION	protein_coding	stop	-	5	160	0	2.12	0	121.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003184	Irf3	ENSMUST00000208143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000207476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000207555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000209006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000208767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000207128	ENSMUSP00000147187	TRANSLATION	protein_coding	start	-	5	161	0	3.13	0	53.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003184	Irf3	ENSMUST00000208958	ENSMUSP00000146729	TRANSLATION	protein_coding	start	-	3	68	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003184	Irf3	ENSMUST00000208906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003184	Irf3	ENSMUST00000107834	ENSMUSP00000103465	TRANSLATION	protein_coding	-	CCDS21224.1	1	419	0	7.75	1.5	287.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003184	Irf3	ENSMUST00000209066	ENSMUSP00000146773	TRANSLATION	protein_coding	-	CCDS21224.1	1	419	0	7.75	1.5	287.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000003184	Irf3	ENSMUST00000003284	ENSMUSP00000003284	TRANSLATION	protein_coding	-	CCDS21224.1	1	419	0	7.75	1.5	287.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030718	Ppme1	ENSMUST00000207092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030718	Ppme1	ENSMUST00000207622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030718	Ppme1	ENSMUST00000208168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030718	Ppme1	ENSMUST00000207634	ENSMUSP00000146716	TRANSLATION	protein_coding	start	-	5	182	2	3.3	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000030718	Ppme1	ENSMUST00000032963	ENSMUSP00000032963	TRANSLATION	protein_coding	-	CCDS40036.1	1	386	9	10.05	7.6	94.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000030589	Rasgrp4	ENSMUST00000159975	ENSMUSP00000125137	TRANSLATION	protein_coding	-	CCDS85258.1	1	678	8	13.12	1.5	176.9	0	-4,-7	-	-	18.076	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000032811	ENSMUSP00000032811	TRANSLATION	protein_coding	-	CCDS85257.1	1	673	8	13.12	5.3	179.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000030589	Rasgrp4	ENSMUST00000205027	ENSMUSP00000145186	TRANSLATION	protein_coding	-	-	5	484	8	8.54	2.4	42.9	0	-4,-7	-	-	6.652	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000160194	ENSMUSP00000124908	TRANSLATION	protein_coding	stop	-	5	429	0	8.43	0	126.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000203380	ENSMUSP00000144753	TRANSLATION	protein_coding	-	-	5	604	8	12.12	1.2	139.5	0	-4,-7	-	-	13.696	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000159898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030589	Rasgrp4	ENSMUST00000160396	ENSMUSP00000125544	TRANSLATION	protein_coding	start	-	5	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000203070	ENSMUSP00000145352	TRANSLATION	protein_coding	-	-	5	581	8	11.37	1.2	137.4	0	-4,-7	-	-	12.07	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000161522	ENSMUSP00000123718	TRANSLATION	protein_coding	-	-	5	659	8	13.09	1.2	179.5	0	-4,-7	-	-	18.034	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000204194	ENSMUSP00000145259	TRANSLATION	protein_coding	-	-	5	576	8	10.29	1.2	67.9	0	-4,-7	-	-	6.436	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000204845	ENSMUSP00000144774	TRANSLATION	protein_coding	-	-	5	639	8	12.04	1.2	139.3	0	-4,-7	-	-	13.522	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000094617	ENSMUSP00000092200	TRANSLATION	protein_coding	-	-	5	679	8	13.12	1.5	176.9	0	-4,-7	-	-	18.076	MINOR
ENSMUSG00000030589	Rasgrp4	ENSMUST00000162946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030589	Rasgrp4	ENSMUST00000159351	ENSMUSP00000124183	TRANSLATION	nonsense_mediated_decay	-	-	1	578	3	12.06	0	136.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041037	Irgq	ENSMUST00000049020	ENSMUSP00000036699	TRANSLATION	protein_coding	-	CCDS20953.1	1	583	7	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078670	Fam174b	ENSMUST00000205946	ENSMUSP00000145753	TRANSLATION	protein_coding	start	-	3	54	0	0	0	68.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078670	Fam174b	ENSMUST00000107456	ENSMUSP00000103080	TRANSLATION	protein_coding	-	CCDS52275.1	1	153	0	0	0.5	145.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000078670	Fam174b	ENSMUST00000206337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059981	Taok2	ENSMUST00000130371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059981	Taok2	ENSMUST00000117394	ENSMUSP00000112963	TRANSLATION	protein_coding	-	CCDS52403.1	1	1240	23	9	1.5	213	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000059981	Taok2	ENSMUST00000156273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059981	Taok2	ENSMUST00000071268	ENSMUSP00000071246	TRANSLATION	protein_coding	-	CCDS52404.1	1	1055	23	9	1.5	213	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059981	Taok2	ENSMUST00000214525	ENSMUSP00000150069	TRANSLATION	protein_coding	start	-	5	407	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030801	Kat8	ENSMUST00000206071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030801	Kat8	ENSMUST00000033070	ENSMUSP00000033070	TRANSLATION	protein_coding	-	CCDS21885.1	1	458	28	10.55	7.5	366	0	-2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000030801	Kat8	ENSMUST00000206364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030801	Kat8	ENSMUST00000205357	ENSMUSP00000145731	TRANSLATION	protein_coding	stop	-	5	176	1	3.25	0	59.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032737	Inppl1	ENSMUST00000035836	ENSMUSP00000048057	TRANSLATION	protein_coding	-	CCDS21515.1	1	1257	0	13.66	3.9	129.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032737	Inppl1	ENSMUST00000185929	ENSMUSP00000139910	TRANSLATION	protein_coding	stop	-	1	1166	0	11.91	0	96.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032737	Inppl1	ENSMUST00000211514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032737	Inppl1	ENSMUST00000209481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032737	Inppl1	ENSMUST00000186316	ENSMUSP00000147394	TRANSLATION	protein_coding	start	-	1	603	0	4.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032737	Inppl1	ENSMUST00000209861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032737	Inppl1	ENSMUST00000210116	ENSMUSP00000148066	TRANSLATION	protein_coding	start/stop	-	5	276	0	6.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032737	Inppl1	ENSMUST00000165052	ENSMUSP00000132883	TRANSLATION	protein_coding	-	CCDS21515.1	1	1257	0	13.66	3.9	129.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032737	Inppl1	ENSMUST00000211436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091528	Vmn2r126	ENSMUST00000173815	ENSMUSP00000134441	TRANSLATION	protein_coding	-	CCDS57544.1	5	854	3	4.36	0.5	400.4	7	2,-3	-	-	14.604	PRINCIPAL:2
ENSMUSG00000091528	Vmn2r126	ENSMUST00000166914	ENSMUSP00000129068	TRANSLATION	protein_coding	-	-	5	861	3	4.558	0.5	393.7	7	2,-3	-	-	14.598	ALTERNATIVE:2
ENSMUSG00000066262	Olfr640	ENSMUST00000218535	ENSMUSP00000151356	TRANSLATION	protein_coding	-	CCDS21602.1	5	314	0	0.2	7.6	397.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000066262	Olfr640	ENSMUST00000084799	ENSMUSP00000081858	TRANSLATION	protein_coding	-	CCDS21602.1	-	314	0	0.2	7.6	397.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034690	Nlrp4c	ENSMUST00000207267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034690	Nlrp4c	ENSMUST00000208360	ENSMUSP00000146613	TRANSLATION	protein_coding	-	CCDS51988.1	5	982	8	6.84	1.5	273.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034690	Nlrp4c	ENSMUST00000121583	ENSMUSP00000113824	TRANSLATION	protein_coding	-	CCDS51988.1	1	982	8	6.84	1.5	273.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034690	Nlrp4c	ENSMUST00000037728	ENSMUSP00000046503	TRANSLATION	protein_coding	-	CCDS51988.1	1	982	8	6.84	1.5	273.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002608	Ccdc97	ENSMUST00000156365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002608	Ccdc97	ENSMUST00000129429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002608	Ccdc97	ENSMUST00000140847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002608	Ccdc97	ENSMUST00000137046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002608	Ccdc97	ENSMUST00000125699	ENSMUSP00000145855	TRANSLATION	protein_coding	stop	-	5	168	0	0	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002608	Ccdc97	ENSMUST00000134201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002608	Ccdc97	ENSMUST00000154143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002608	Ccdc97	ENSMUST00000002683	ENSMUSP00000002683	TRANSLATION	protein_coding	-	CCDS20994.1	1	340	0	0	0.5	160	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000002608	Ccdc97	ENSMUST00000129519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062542	Syt9	ENSMUST00000130414	ENSMUSP00000122049	TRANSLATION	nonsense_mediated_decay	-	-	5	186	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000062542	Syt9	ENSMUST00000137663	ENSMUSP00000117969	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062542	Syt9	ENSMUST00000127444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062542	Syt9	ENSMUST00000073459	ENSMUSP00000073164	TRANSLATION	protein_coding	-	CCDS40078.1	1	491	22	4.5	7.6	176.4	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000062542	Syt9	ENSMUST00000144003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096658	Vmn2r39	ENSMUST00000174388	ENSMUSP00000134010	TRANSLATION	protein_coding	-	CCDS57488.1	5	861	0	2.8	0.5	386.7	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000109344	A26c2	ENSMUST00000207359	ENSMUSP00000146381	TRANSLATION	protein_coding	stop	-	5	291	0	4.65	0	114	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000055610	Olfr307	ENSMUST00000213705	ENSMUSP00000151140	TRANSLATION	protein_coding	-	CCDS21426.1	5	313	0	0.2	1.5	144.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055610	Olfr307	ENSMUST00000069279	ENSMUSP00000063538	TRANSLATION	protein_coding	-	CCDS21426.1	-	313	0	0.2	1.5	144.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055610	Olfr307	ENSMUST00000217494	ENSMUSP00000149779	TRANSLATION	protein_coding	-	CCDS21426.1	5	313	0	0.2	1.5	144.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074417	Gm14548	ENSMUST00000070639	ENSMUSP00000070073	TRANSLATION	protein_coding	-	-	5	680	0	5.98	0.5	128.4	0	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000091652	Vmn1r57	ENSMUST00000170780	ENSMUSP00000131917	TRANSLATION	protein_coding	-	CCDS51984.1	-	310	0	0	0.5	65.7	7	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000091652	Vmn1r57	ENSMUST00000227798	ENSMUSP00000153876	TRANSLATION	protein_coding	-	CCDS51984.1	-	310	0	0	0.5	65.7	7	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000091652	Vmn1r57	ENSMUST00000227864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091652	Vmn1r57	ENSMUST00000228062	ENSMUSP00000153848	TRANSLATION	protein_coding	-	CCDS51984.1	-	310	0	0	0.5	65.7	7	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000056863	Olfr702	ENSMUST00000208864	ENSMUSP00000146445	TRANSLATION	protein_coding	stop	-	3	124	0	0.6	0	61.8	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000056863	Olfr702	ENSMUST00000208895	ENSMUSP00000147225	TRANSLATION	protein_coding	stop	-	-	125	0	0.6	0	63.8	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000056863	Olfr702	ENSMUST00000219803	ENSMUSP00000151862	TRANSLATION	protein_coding	-	CCDS21673.1	5	318	0	0.84	0.5	179.6	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056863	Olfr702	ENSMUST00000080899	ENSMUSP00000079704	TRANSLATION	protein_coding	-	CCDS21673.1	5	318	0	0.84	0.5	179.6	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004651	Tyr	ENSMUST00000207834	ENSMUSP00000146757	TRANSLATION	protein_coding	stop	-	3	158	3	0.48	0	46.2	0	3,-1	-	-	-1	MINOR
ENSMUSG00000004651	Tyr	ENSMUST00000004770	ENSMUSP00000004770	TRANSLATION	protein_coding	-	CCDS52304.1	1	533	7	2.22	2.7	145.7	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000004651	Tyr	ENSMUST00000207164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030703	Gdpd3	ENSMUST00000206350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030703	Gdpd3	ENSMUST00000205468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030703	Gdpd3	ENSMUST00000032944	ENSMUSP00000032944	TRANSLATION	protein_coding	-	CCDS40130.1	1	330	6	3.93	0.5	76.6	0	-1,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030703	Gdpd3	ENSMUST00000205910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030703	Gdpd3	ENSMUST00000206858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030703	Gdpd3	ENSMUST00000207004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095309	Vmn1r125	ENSMUST00000098739	ENSMUSP00000096335	TRANSLATION	protein_coding	-	CCDS52093.1	-	307	0	0	1.5	54.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078671	Chd2	ENSMUST00000206665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078671	Chd2	ENSMUST00000200218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078671	Chd2	ENSMUST00000026895	ENSMUSP00000026895	TRANSLATION	protein_coding	stop	-	5	333	0	2.85	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000197800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078671	Chd2	ENSMUST00000200423	ENSMUSP00000142885	TRANSLATION	protein_coding	start/stop	-	5	113	0	2.8	0	54.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000199831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078671	Chd2	ENSMUST00000197642	ENSMUSP00000142408	TRANSLATION	protein_coding	stop	-	5	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000200492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078671	Chd2	ENSMUST00000208458	ENSMUSP00000147180	TRANSLATION	nonsense_mediated_decay	start	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000173785	ENSMUSP00000133714	TRANSLATION	protein_coding	start/stop	-	5	163	0	1.75	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000199601	ENSMUSP00000143203	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.75	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000181971	ENSMUSP00000137985	TRANSLATION	nonsense_mediated_decay	start	-	5	35	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000198225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078671	Chd2	ENSMUST00000172704	ENSMUSP00000134484	TRANSLATION	protein_coding	stop	-	5	178	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000169922	ENSMUSP00000126352	TRANSLATION	protein_coding	-	CCDS52274.1	5	1827	7	23.285	6.3	504	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000078671	Chd2	ENSMUST00000038366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078671	Chd2	ENSMUST00000199641	ENSMUSP00000142848	TRANSLATION	protein_coding	start/stop	-	5	120	0	3	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078671	Chd2	ENSMUST00000199809	ENSMUSP00000142959	TRANSLATION	nonsense_mediated_decay	start	-	5	220	0	4.31	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001741	Il16	ENSMUST00000001792	ENSMUSP00000001792	TRANSLATION	protein_coding	-	CCDS21412.1	1	1322	0	7.69	1.5	109.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001741	Il16	ENSMUST00000131916	ENSMUSP00000122022	TRANSLATION	protein_coding	stop	-	2	29	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001741	Il16	ENSMUST00000145610	ENSMUSP00000146496	TRANSLATION	protein_coding	-	-	1	624	0	4.2	0	45.9	0	-4,-5	-	-	2.16	MINOR
ENSMUSG00000001741	Il16	ENSMUST00000151047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001741	Il16	ENSMUST00000153560	ENSMUSP00000118516	TRANSLATION	nonsense_mediated_decay	-	-	1	238	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001741	Il16	ENSMUST00000156553	ENSMUSP00000122813	TRANSLATION	protein_coding	stop	-	2	29	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000171197	ENSMUSP00000128439	TRANSLATION	protein_coding	-	-	5	357	0	7.8	0	0	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000239404	ENSMUSP00000159345	TRANSLATION	protein_coding	-	CCDS52366.1	-	415	0	8.8	13.6	0	0	-4,-5	-	-	8.5	ALTERNATIVE:1
ENSMUSG00000055320	Tead1	ENSMUST00000170352	ENSMUSP00000129798	TRANSLATION	protein_coding	-	-	5	405	0	8.05	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000171373	ENSMUSP00000131765	TRANSLATION	protein_coding	stop	-	2	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000084705	ENSMUSP00000081755	TRANSLATION	protein_coding	start	-	1	426	0	8.8	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000168328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055320	Tead1	ENSMUST00000165036	ENSMUSP00000131221	TRANSLATION	protein_coding	-	-	5	415	0	8.8	7	0	0	-4,-5	-	-	6.404	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000210510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055320	Tead1	ENSMUST00000163593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055320	Tead1	ENSMUST00000106638	ENSMUSP00000102249	TRANSLATION	protein_coding	-	-	1	430	0	8.8	1.2	0	0	-4,-5	-	-	4.564	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000239442	ENSMUSP00000159359	TRANSLATION	protein_coding	-	CCDS52365.1	-	436	0	9.55	11.6	0	0	-4,-5	-	-	9.364	ALTERNATIVE:1
ENSMUSG00000055320	Tead1	ENSMUST00000167060	ENSMUSP00000130564	TRANSLATION	protein_coding	start/stop	-	5	186	0	4.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000164363	ENSMUSP00000127574	TRANSLATION	protein_coding	-	-	5	451	0	9.55	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000172065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055320	Tead1	ENSMUST00000168981	ENSMUSP00000133025	TRANSLATION	protein_coding	-	-	5	394	0	8.05	2.5	0	0	-4,-5	-	-	3.476	MINOR
ENSMUSG00000055320	Tead1	ENSMUST00000069256	ENSMUSP00000130459	TRANSLATION	protein_coding	-	CCDS52367.1	1	411	0	8.8	13.6	0	0	-4,-5	-	-	8.5	PRINCIPAL:3
ENSMUSG00000055320	Tead1	ENSMUST00000059768	ENSMUSP00000060671	TRANSLATION	protein_coding	start	-	1	451	0	9.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050917	Fgf4	ENSMUST00000208265	ENSMUSP00000146975	TRANSLATION	protein_coding	stop	-	2	52	3	1.33	0	54.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050917	Fgf4	ENSMUST00000060336	ENSMUSP00000056752	TRANSLATION	protein_coding	-	CCDS22052.1	1	202	7	3.38	1.5	126.1	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030714	Sgf29	ENSMUST00000138794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030714	Sgf29	ENSMUST00000126570	ENSMUSP00000145654	TRANSLATION	protein_coding	stop	-	5	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030714	Sgf29	ENSMUST00000032956	ENSMUSP00000032956	TRANSLATION	protein_coding	-	CCDS21837.1	1	293	0	5	17.5	136.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030714	Sgf29	ENSMUST00000129786	ENSMUSP00000145680	TRANSLATION	protein_coding	start	-	2	160	0	4	0	112.7	0	0,-5	-	-	-1	MINOR
ENSMUSG00000030714	Sgf29	ENSMUST00000123274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030714	Sgf29	ENSMUST00000205507	ENSMUSP00000146122	TRANSLATION	nonsense_mediated_decay	-	-	5	163	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030714	Sgf29	ENSMUST00000206359	ENSMUSP00000145562	TRANSLATION	nonsense_mediated_decay	-	-	5	152	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030714	Sgf29	ENSMUST00000123382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030714	Sgf29	ENSMUST00000152231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030714	Sgf29	ENSMUST00000123571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057540	Olfr310	ENSMUST00000081918	ENSMUSP00000080589	TRANSLATION	protein_coding	-	CCDS21423.1	-	332	0	0	1.5	153	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057540	Olfr310	ENSMUST00000217724	ENSMUSP00000151989	TRANSLATION	protein_coding	-	CCDS21423.1	5	332	0	0	1.5	153	6	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030701	Plekhb1	ENSMUST00000139708	ENSMUSP00000122333	TRANSLATION	protein_coding	stop	-	5	149	10	3.08	0	37.5	0	-3,0	-	-	-1	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000107046	ENSMUSP00000102661	TRANSLATION	protein_coding	-	CCDS52324.1	1	189	10	3.08	6.3	37.5	0	-3,0	-	-	18.8	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000208812	ENSMUSP00000146508	TRANSLATION	protein_coding	stop	-	5	90	10	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000116287	ENSMUSP00000111991	TRANSLATION	protein_coding	-	CCDS52325.1	3	224	10	3.68	6.3	35.2	0	-3,0	-	-	19.634	ALTERNATIVE:1
ENSMUSG00000030701	Plekhb1	ENSMUST00000135255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030701	Plekhb1	ENSMUST00000107043	ENSMUSP00000102658	TRANSLATION	protein_coding	-	CCDS80756.1	2	134	10	2.712	0.5	28	0	-3,1	-	-	14.544	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000138830	ENSMUSP00000116888	TRANSLATION	protein_coding	stop	-	2	122	10	3.08	0	37.5	0	-3,0	-	-	-1	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000079176	ENSMUSP00000078175	TRANSLATION	protein_coding	-	CCDS21504.1	1	243	10	3.68	5.1	35.2	0	-4,-5	-	-	19.182	PRINCIPAL:3
ENSMUSG00000030701	Plekhb1	ENSMUST00000107045	ENSMUSP00000102660	TRANSLATION	protein_coding	-	CCDS52325.1	1	224	10	3.68	6.3	35.2	0	-3,0	-	-	19.634	ALTERNATIVE:1
ENSMUSG00000030701	Plekhb1	ENSMUST00000107044	ENSMUSP00000102659	TRANSLATION	protein_coding	-	CCDS52324.1	1	189	10	3.08	6.3	37.5	0	-3,0	-	-	18.8	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000107047	ENSMUSP00000102662	TRANSLATION	protein_coding	-	CCDS52326.1	1	208	10	3.08	5.1	35.2	0	-4,-5	-	-	17.982	MINOR
ENSMUSG00000030701	Plekhb1	ENSMUST00000151123	ENSMUSP00000115559	TRANSLATION	protein_coding	stop	-	5	239	10	3.68	5.1	35.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030451	Herc2	ENSMUST00000206537	ENSMUSP00000146182	TRANSLATION	protein_coding	stop	-	1	965	0	6.6	0	211.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030451	Herc2	ENSMUST00000205678	ENSMUSP00000145560	TRANSLATION	protein_coding	start/stop	-	1	167	0	0.915	0	40.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030451	Herc2	ENSMUST00000205653	ENSMUSP00000145771	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030451	Herc2	ENSMUST00000164095	ENSMUSP00000131573	TRANSLATION	protein_coding	-	CCDS21318.1	1	4836	8	28.585	5.1	1247.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030451	Herc2	ENSMUST00000206101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030451	Herc2	ENSMUST00000076226	ENSMUSP00000075579	TRANSLATION	protein_coding	-	CCDS21318.1	1	4836	8	28.585	5.1	1247.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030451	Herc2	ENSMUST00000206990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030451	Herc2	ENSMUST00000205303	ENSMUSP00000145997	TRANSLATION	protein_coding	-	-	5	4800	8	28.585	1.5	1247.9	0	-4,-5	-	-	18.244	MINOR
ENSMUSG00000038670	Mybpc2	ENSMUST00000207516	ENSMUSP00000146698	TRANSLATION	protein_coding	start/stop	-	5	155	0	3.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038670	Mybpc2	ENSMUST00000165208	ENSMUSP00000130127	TRANSLATION	protein_coding	-	CCDS52233.1	1	1136	0	23.144	2.7	452.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063808	Gpatch1	ENSMUST00000131143	ENSMUSP00000121711	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0	0	114.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063808	Gpatch1	ENSMUST00000079693	ENSMUSP00000078632	TRANSLATION	protein_coding	-	CCDS21147.1	1	930	0	0	1.5	152.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063808	Gpatch1	ENSMUST00000131213	ENSMUSP00000117475	TRANSLATION	nonsense_mediated_decay	-	-	1	883	0	0	0	152.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063808	Gpatch1	ENSMUST00000153778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063808	Gpatch1	ENSMUST00000206758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070811	Sult2a2	ENSMUST00000086148	ENSMUSP00000083317	TRANSLATION	protein_coding	-	CCDS52030.1	1	194	10	3.2	0.5	122.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039990	Edrf1	ENSMUST00000138370	ENSMUSP00000134801	TRANSLATION	nonsense_mediated_decay	start	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039990	Edrf1	ENSMUST00000154795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039990	Edrf1	ENSMUST00000211072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039990	Edrf1	ENSMUST00000051169	ENSMUSP00000059166	TRANSLATION	protein_coding	-	CCDS21932.2	1	1240	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000039990	Edrf1	ENSMUST00000137338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039990	Edrf1	ENSMUST00000128901	ENSMUSP00000115641	TRANSLATION	protein_coding	-	-	5	1206	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039990	Edrf1	ENSMUST00000176661	ENSMUSP00000134967	TRANSLATION	protein_coding	start	-	5	127	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030672	Mylpf	ENSMUST00000206772	ENSMUSP00000145886	TRANSLATION	protein_coding	-	CCDS85420.1	3	149	5	4.75	5.9	24.6	0	-4,-5	-	-	16.854	MINOR
ENSMUSG00000030672	Mylpf	ENSMUST00000139613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030672	Mylpf	ENSMUST00000032910	ENSMUSP00000032910	TRANSLATION	protein_coding	-	CCDS40140.1	1	169	5	5.15	17.3	24.6	0	-4,-2	-	-	20.448	PRINCIPAL:1
ENSMUSG00000030672	Mylpf	ENSMUST00000206204	ENSMUSP00000146230	TRANSLATION	protein_coding	stop	-	3	92	5	2.73	0	27.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030672	Mylpf	ENSMUST00000143222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030672	Mylpf	ENSMUST00000127710	ENSMUSP00000120915	TRANSLATION	protein_coding	stop	-	3	60	5	2	0	27.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030751	Psma1	ENSMUST00000123801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030751	Psma1	ENSMUST00000210966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030751	Psma1	ENSMUST00000135570	ENSMUSP00000147815	TRANSLATION	protein_coding	-	-	3	238	4	6.75	1.2	179.1	0	-4,-7	-	-	11.494	MINOR
ENSMUSG00000030751	Psma1	ENSMUST00000154909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030751	Psma1	ENSMUST00000033008	ENSMUSP00000033008	TRANSLATION	protein_coding	-	CCDS40094.1	1	263	4	7.58	10.8	227.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000030604	Zfp626	ENSMUST00000080175	ENSMUSP00000079068	TRANSLATION	protein_coding	stop	-	5	272	23	1.13	0	85.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030604	Zfp626	ENSMUST00000205671	ENSMUSP00000146286	TRANSLATION	protein_coding	-	CCDS85250.1	1	676	70	3.23	0.5	337	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073975	Olfr550	ENSMUST00000216524	ENSMUSP00000149536	TRANSLATION	protein_coding	-	CCDS21535.1	5	316	0	0.2	3.9	337.3	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073975	Olfr550	ENSMUST00000098225	ENSMUSP00000095828	TRANSLATION	protein_coding	-	CCDS21535.1	-	316	0	0.2	3.9	337.3	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073915	Olfr676	ENSMUST00000215533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073915	Olfr676	ENSMUST00000219042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073915	Olfr676	ENSMUST00000219602	ENSMUSP00000151474	TRANSLATION	protein_coding	-	CCDS21637.1	5	317	0	0.36	1.5	376.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073915	Olfr676	ENSMUST00000098162	ENSMUSP00000095765	TRANSLATION	protein_coding	-	CCDS21637.1	-	317	0	0.36	1.5	376.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000110139	Gm45783	ENSMUST00000210877	ENSMUSP00000148197	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	74	0	0	0	46.9	0	-2,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000051172	Olfr672	ENSMUST00000213942	ENSMUSP00000149704	TRANSLATION	protein_coding	-	CCDS40073.1	3	312	0	0.36	5.2	368.2	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051172	Olfr672	ENSMUST00000050599	ENSMUSP00000054607	TRANSLATION	protein_coding	-	CCDS40073.1	-	312	0	0.36	5.2	368.2	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058454	Dhcr7	ENSMUST00000145471	ENSMUSP00000146937	TRANSLATION	nonsense_mediated_decay	start	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058454	Dhcr7	ENSMUST00000144034	ENSMUSP00000118957	TRANSLATION	protein_coding	stop	-	3	225	0	3.37	0	112.3	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000058454	Dhcr7	ENSMUST00000139748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058454	Dhcr7	ENSMUST00000073878	ENSMUSP00000073541	TRANSLATION	protein_coding	-	CCDS22048.1	5	471	0	4.83	1.5	307.6	11	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000058454	Dhcr7	ENSMUST00000124340	ENSMUSP00000117659	TRANSLATION	protein_coding	-	CCDS22048.1	5	471	0	4.83	1.5	307.6	11	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000058454	Dhcr7	ENSMUST00000128610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058454	Dhcr7	ENSMUST00000141916	ENSMUSP00000121782	TRANSLATION	protein_coding	-	CCDS22048.1	5	471	0	4.83	1.5	307.6	11	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000058454	Dhcr7	ENSMUST00000208535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058454	Dhcr7	ENSMUST00000125564	ENSMUSP00000146636	TRANSLATION	protein_coding	stop	-	3	71	0	0.24	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000058454	Dhcr7	ENSMUST00000128454	ENSMUSP00000119855	TRANSLATION	protein_coding	stop	-	1	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058454	Dhcr7	ENSMUST00000143338	ENSMUSP00000119984	TRANSLATION	protein_coding	stop	-	5	215	0	2.03	0	0	9	-4,-2	-	-	-1	MINOR
ENSMUSG00000058454	Dhcr7	ENSMUST00000208631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058454	Dhcr7	ENSMUST00000207143	ENSMUSP00000146947	TRANSLATION	protein_coding	-	-	5	474	0	4.83	1.5	307.6	11	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000030693	Klk10	ENSMUST00000014058	ENSMUSP00000014058	TRANSLATION	protein_coding	-	CCDS39936.1	1	278	5	4	1.7	201.5	0	1,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000033961	Zfp446	ENSMUST00000108536	ENSMUSP00000104176	TRANSLATION	protein_coding	-	-	2	423	12	1.48	1.5	181.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000033961	Zfp446	ENSMUST00000108535	ENSMUSP00000104175	TRANSLATION	protein_coding	-	CCDS52022.1	1	256	0	1	0.5	163.3	0	-4,-7	-	-	8.97	MINOR
ENSMUSG00000033961	Zfp446	ENSMUST00000128427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033961	Zfp446	ENSMUST00000045810	ENSMUSP00000039073	TRANSLATION	protein_coding	-	CCDS20820.1	1	523	12	1.48	0.5	181.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000033961	Zfp446	ENSMUST00000147996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033961	Zfp446	ENSMUST00000108537	ENSMUSP00000104177	TRANSLATION	protein_coding	-	CCDS52023.1	1	348	12	1.48	0.5	181.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000063838	Cdc42ep5	ENSMUST00000076831	ENSMUSP00000092508	TRANSLATION	protein_coding	-	CCDS20733.1	1	150	0	0	5.1	67.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000063838	Cdc42ep5	ENSMUST00000140410	ENSMUSP00000122849	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063838	Cdc42ep5	ENSMUST00000143825	ENSMUSP00000117257	TRANSLATION	protein_coding	stop	-	2	79	0	0	0	29.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000050605	Zfp61	ENSMUST00000139811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050605	Zfp61	ENSMUST00000206535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050605	Zfp61	ENSMUST00000077780	ENSMUSP00000076954	TRANSLATION	protein_coding	-	CCDS39829.1	1	555	36	1.6	0.5	258.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050605	Zfp61	ENSMUST00000165241	ENSMUSP00000132551	TRANSLATION	protein_coding	-	CCDS39829.1	5	555	36	1.6	0.5	258.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050605	Zfp61	ENSMUST00000138924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050605	Zfp61	ENSMUST00000128421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050605	Zfp61	ENSMUST00000138619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050605	Zfp61	ENSMUST00000145131	ENSMUSP00000117077	TRANSLATION	protein_coding	stop	-	3	157	0	1	0	75.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050605	Zfp61	ENSMUST00000137342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061877	BC048679	ENSMUST00000207871	ENSMUSP00000147131	TRANSLATION	protein_coding	-	-	1	166	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000061877	BC048679	ENSMUST00000144156	ENSMUSP00000120616	TRANSLATION	protein_coding	-	CCDS57558.1	1	172	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000061877	BC048679	ENSMUST00000073406	ENSMUSP00000073114	TRANSLATION	protein_coding	-	CCDS40008.1	1	115	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000030518	Fam189a1	ENSMUST00000149851	ENSMUSP00000115095	TRANSLATION	protein_coding	stop	-	5	214	0	0	0	35.8	2	0,-3	-	-	-1	MINOR
ENSMUSG00000030518	Fam189a1	ENSMUST00000144535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030518	Fam189a1	ENSMUST00000133883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030518	Fam189a1	ENSMUST00000119118	ENSMUSP00000113680	TRANSLATION	protein_coding	-	CCDS21336.2	5	515	0	0	1.5	105.1	6	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030518	Fam189a1	ENSMUST00000148459	ENSMUSP00000116119	TRANSLATION	protein_coding	stop	-	3	173	0	0	0	54.6	5	-4,-2	-	-	-1	MINOR
ENSMUSG00000018819	Lsp1	ENSMUST00000038946	ENSMUSP00000040637	TRANSLATION	protein_coding	-	CCDS40193.1	1	328	0	0	1.5	88.8	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000018819	Lsp1	ENSMUST00000105966	ENSMUSP00000101586	TRANSLATION	protein_coding	-	CCDS72073.1	1	322	0	0	0.5	88.8	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000018819	Lsp1	ENSMUST00000105968	ENSMUSP00000101588	TRANSLATION	protein_coding	-	CCDS52450.1	1	330	0	0	1.5	88.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018819	Lsp1	ENSMUST00000132956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018819	Lsp1	ENSMUST00000105967	ENSMUSP00000101587	TRANSLATION	protein_coding	-	CCDS72072.1	1	324	0	0	0.5	88.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018819	Lsp1	ENSMUST00000140626	ENSMUSP00000147933	TRANSLATION	protein_coding	stop	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018819	Lsp1	ENSMUST00000018963	ENSMUSP00000018963	TRANSLATION	protein_coding	-	CCDS52450.1	1	330	0	0	1.5	88.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018819	Lsp1	ENSMUST00000142408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018819	Lsp1	ENSMUST00000128986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018819	Lsp1	ENSMUST00000156960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018819	Lsp1	ENSMUST00000126149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018819	Lsp1	ENSMUST00000149521	ENSMUSP00000147500	TRANSLATION	protein_coding	-	CCDS85469.1	1	82	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025584	Pde8a	ENSMUST00000128154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025584	Pde8a	ENSMUST00000130494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025584	Pde8a	ENSMUST00000026672	ENSMUSP00000026672	TRANSLATION	protein_coding	-	CCDS40005.1	1	823	6	7	0.5	354.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030688	Stard10	ENSMUST00000167888	ENSMUSP00000127962	TRANSLATION	protein_coding	start	-	1	265	0	3.328	0	72.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000174291	ENSMUSP00000133985	TRANSLATION	protein_coding	start	-	5	283	0	2.696	0	86.7	0	-3,0	-	-	-1	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000032927	ENSMUSP00000032927	TRANSLATION	protein_coding	-	CCDS21509.1	1	291	0	3.376	7.5	89.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030688	Stard10	ENSMUST00000172662	ENSMUSP00000134156	TRANSLATION	protein_coding	start	-	1	87	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000173270	ENSMUSP00000133955	TRANSLATION	protein_coding	-	-	5	160	0	2.048	0	41	0	-4,-6	-	-	6.102	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000174140	ENSMUSP00000134430	TRANSLATION	nonsense_mediated_decay	start	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000210192	ENSMUSP00000148114	TRANSLATION	protein_coding	-	CCDS21509.1	5	291	0	3.376	7.5	89.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030688	Stard10	ENSMUST00000163799	ENSMUSP00000129408	TRANSLATION	protein_coding	-	-	1	364	0	3.376	1.5	89.2	0	-4,-6	-	-	12.231	MINOR
ENSMUSG00000030688	Stard10	ENSMUST00000174083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030688	Stard10	ENSMUST00000164479	ENSMUSP00000133002	TRANSLATION	protein_coding	-	CCDS21509.1	1	291	0	3.376	7.5	89.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030688	Stard10	ENSMUST00000172630	ENSMUSP00000134138	TRANSLATION	protein_coding	stop	-	2	150	0	2.138	0	34.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000202247	ENSMUSP00000144398	TRANSLATION	protein_coding	start	-	3	192	2	4.5	0	198.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000201409	ENSMUSP00000144220	TRANSLATION	protein_coding	stop	-	3	313	3	2.362	0	68.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000207686	ENSMUSP00000146524	TRANSLATION	protein_coding	stop	-	5	126	3	2.362	0	68.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000107537	ENSMUSP00000103161	TRANSLATION	protein_coding	-	CCDS80733.1	1	849	9	10.48	3.9	378.4	0	-4,-5	-	-	18.736	ALTERNATIVE:2
ENSMUSG00000025326	Ube3a	ENSMUST00000202685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025326	Ube3a	ENSMUST00000202440	ENSMUSP00000143896	TRANSLATION	protein_coding	stop	-	5	49	3	1.25	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000200781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025326	Ube3a	ENSMUST00000201480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025326	Ube3a	ENSMUST00000201162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025326	Ube3a	ENSMUST00000202207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025326	Ube3a	ENSMUST00000200949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025326	Ube3a	ENSMUST00000200758	ENSMUSP00000143859	TRANSLATION	protein_coding	-	CCDS39973.1	1	870	9	10.612	3.9	378.4	0	-4,-6	-	-	19	PRINCIPAL:3
ENSMUSG00000025326	Ube3a	ENSMUST00000208313	ENSMUSP00000146673	TRANSLATION	protein_coding	stop	-	5	78	3	1.962	0	67.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000202945	ENSMUSP00000143962	TRANSLATION	protein_coding	-	-	1	762	7	8.48	0.5	246.9	0	-4,-5	-	-	6.402	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000201794	ENSMUSP00000144453	TRANSLATION	protein_coding	stop	-	3	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000200709	ENSMUSP00000144148	TRANSLATION	protein_coding	stop	-	3	40	0	0.632	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000202288	ENSMUSP00000144645	TRANSLATION	protein_coding	start	-	5	143	2	3.75	0	140.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025326	Ube3a	ENSMUST00000202776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095276	Gfy	ENSMUST00000211004	ENSMUSP00000147535	TRANSLATION	protein_coding	stop	-	3	272	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000095276	Gfy	ENSMUST00000179443	ENSMUSP00000135927	TRANSLATION	protein_coding	-	CCDS57548.1	5	504	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000038611	Phrf1	ENSMUST00000122868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038611	Phrf1	ENSMUST00000144250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038611	Phrf1	ENSMUST00000122143	ENSMUSP00000113195	TRANSLATION	protein_coding	-	-	1	1523	9	2.364	0	51.2	0	-4,-5	-	-	9.6	MINOR
ENSMUSG00000038611	Phrf1	ENSMUST00000211144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038611	Phrf1	ENSMUST00000132540	ENSMUSP00000147372	TRANSLATION	nonsense_mediated_decay	start	-	3	127	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038611	Phrf1	ENSMUST00000142572	ENSMUSP00000117393	TRANSLATION	protein_coding	start	-	1	773	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038611	Phrf1	ENSMUST00000130687	ENSMUSP00000123351	TRANSLATION	protein_coding	start	-	1	331	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038611	Phrf1	ENSMUST00000155123	ENSMUSP00000120759	TRANSLATION	nonsense_mediated_decay	-	-	5	214	12	1.64	0	38	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038611	Phrf1	ENSMUST00000134057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038611	Phrf1	ENSMUST00000106027	ENSMUSP00000101648	TRANSLATION	protein_coding	-	CCDS52441.1	5	1682	16	2.94	0.5	89.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070460	Olfr291	ENSMUST00000211582	ENSMUSP00000148266	TRANSLATION	protein_coding	-	CCDS21420.1	2	317	0	0.42	2.7	182.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070460	Olfr291	ENSMUST00000217039	ENSMUSP00000150934	TRANSLATION	protein_coding,RT	-	-	2	315	0	0.42	2.7	182.8	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000030911	Zp2	ENSMUST00000208874	ENSMUSP00000147097	TRANSLATION	protein_coding	-	-	1	676	0	5.37	0.5	160.5	0	0,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000030911	Zp2	ENSMUST00000207333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030911	Zp2	ENSMUST00000207726	ENSMUSP00000146926	TRANSLATION	nonsense_mediated_decay	-	-	1	428	0	0.2	0	0	0	0,1	-	-	-1	MINOR
ENSMUSG00000030911	Zp2	ENSMUST00000033207	ENSMUSP00000033207	TRANSLATION	protein_coding	-	CCDS21792.1	1	713	0	5.37	0.5	160.5	0	0,1	-	-	12	PRINCIPAL:2
ENSMUSG00000030911	Zp2	ENSMUST00000208122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025139	Tollip	ENSMUST00000151890	ENSMUSP00000118336	TRANSLATION	protein_coding	-	-	1	205	3	1.92	2.4	96.3	0	-4,-6	-	-	11.84	MINOR
ENSMUSG00000025139	Tollip	ENSMUST00000130439	ENSMUSP00000117938	TRANSLATION	protein_coding	-	CCDS85459.1	5	270	3	3.0784	2.7	106.1	0	-4,-5	-	-	14.832	MINOR
ENSMUSG00000025139	Tollip	ENSMUST00000001950	ENSMUSP00000001950	TRANSLATION	protein_coding	-	CCDS22020.1	1	274	3	3.4084	14.8	106.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000025139	Tollip	ENSMUST00000211231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025139	Tollip	ENSMUST00000055819	ENSMUSP00000051485	TRANSLATION	protein_coding	-	-	1	220	3	2.4084	0	52.8	0	-4,-6	-	-	9.804	MINOR
ENSMUSG00000051727	Kctd14	ENSMUST00000143321	ENSMUSP00000146081	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051727	Kctd14	ENSMUST00000205577	ENSMUSP00000145727	TRANSLATION	protein_coding	-	CCDS85342.1	1	234	0	0.48	0.5	57	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051727	Kctd14	ENSMUST00000050732	ENSMUSP00000060557	TRANSLATION	protein_coding	-	CCDS85342.1	1	234	0	0.48	0.5	57	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051727	Kctd14	ENSMUST00000121987	ENSMUSP00000113765	TRANSLATION	protein_coding	-	-	1	74	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000051727	Kctd14	ENSMUST00000206658	ENSMUSP00000145558	TRANSLATION	protein_coding	-	CCDS21459.2	3	287	0	0.48	0.5	57	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000051727	Kctd14	ENSMUST00000206279	ENSMUSP00000145977	TRANSLATION	protein_coding	-	-	2	266	0	0.48	1.5	57	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000205980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051910	Sox6	ENSMUST00000206369	ENSMUSP00000145931	TRANSLATION	protein_coding	-	-	5	828	0	2	3.9	78	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000206573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051910	Sox6	ENSMUST00000072804	ENSMUSP00000072583	TRANSLATION	protein_coding	-	CCDS40098.1	1	827	0	2	2.7	78	0	-4,-5	-	-	12.586	PRINCIPAL:4
ENSMUSG00000051910	Sox6	ENSMUST00000206123	ENSMUSP00000145576	TRANSLATION	protein_coding	stop	-	2	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051910	Sox6	ENSMUST00000206912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051910	Sox6	ENSMUST00000206775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051910	Sox6	ENSMUST00000206427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051910	Sox6	ENSMUST00000166877	ENSMUSP00000129512	TRANSLATION	protein_coding	-	CCDS52369.1	5	787	0	2	3.9	78	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000205405	ENSMUSP00000145732	TRANSLATION	protein_coding	-	-	5	828	0	2	3.9	78	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000206034	ENSMUSP00000145919	TRANSLATION	protein_coding	-	-	5	786	0	2	3.9	78	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000205818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051910	Sox6	ENSMUST00000106612	ENSMUSP00000102223	TRANSLATION	protein_coding	-	CCDS40097.1	1	785	0	2	2.7	78	0	-4,-5	-	-	12.586	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000205479	ENSMUSP00000145561	TRANSLATION	protein_coding	start/stop	-	3	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051910	Sox6	ENSMUST00000169129	ENSMUSP00000126404	TRANSLATION	protein_coding	-	CCDS52369.1	1	787	0	2	3.9	78	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000051910	Sox6	ENSMUST00000166207	ENSMUSP00000129027	TRANSLATION	protein_coding	-	CCDS40098.1	1	827	0	2	2.7	78	0	-4,-5	-	-	12.586	PRINCIPAL:4
ENSMUSG00000042978	Sbk1	ENSMUST00000239081	ENSMUSP00000159131	TRANSLATION	protein_coding	start	-	-	503	20	2.86	0	169.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042978	Sbk1	ENSMUST00000206424	ENSMUSP00000145733	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042978	Sbk1	ENSMUST00000056028	ENSMUSP00000060907	TRANSLATION	protein_coding	-	CCDS21824.1	1	417	20	2.86	2.7	169.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042978	Sbk1	ENSMUST00000206541	ENSMUSP00000145750	TRANSLATION	protein_coding	start	-	3	134	1	0.48	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054499	Dedd2	ENSMUST00000206498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054499	Dedd2	ENSMUST00000205271	ENSMUSP00000146052	TRANSLATION	protein_coding	-	CCDS20973.1	5	330	0	0	1.7	72.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054499	Dedd2	ENSMUST00000206750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054499	Dedd2	ENSMUST00000058702	ENSMUSP00000049763	TRANSLATION	protein_coding	-	CCDS20973.1	1	330	0	0	1.7	72.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040139	9430038I01Rik	ENSMUST00000068996	ENSMUSP00000070550	TRANSLATION	protein_coding	-	CCDS52424.1	1	107	0	0	3.9	0	0	-4,-1	-	-	1	PRINCIPAL:2
ENSMUSG00000040139	9430038I01Rik	ENSMUST00000135335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040139	9430038I01Rik	ENSMUST00000120340	ENSMUSP00000112956	TRANSLATION	protein_coding	-	-	1	107	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000040139	9430038I01Rik	ENSMUST00000145881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040139	9430038I01Rik	ENSMUST00000117404	ENSMUSP00000112892	TRANSLATION	protein_coding	-	-	5	155	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000036989	Trim3	ENSMUST00000106789	ENSMUSP00000102401	TRANSLATION	protein_coding	-	CCDS21655.1	1	744	12	6.71	8.8	319.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036989	Trim3	ENSMUST00000153371	ENSMUSP00000119910	TRANSLATION	protein_coding	stop	-	5	287	12	1.88	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036989	Trim3	ENSMUST00000140882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036989	Trim3	ENSMUST00000154218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036989	Trim3	ENSMUST00000156581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036989	Trim3	ENSMUST00000150363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036989	Trim3	ENSMUST00000147044	ENSMUSP00000114822	TRANSLATION	protein_coding	-	CCDS21655.1	1	744	12	6.71	8.8	319.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036989	Trim3	ENSMUST00000057525	ENSMUSP00000053384	TRANSLATION	protein_coding	-	CCDS21655.1	1	744	12	6.71	8.8	319.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036989	Trim3	ENSMUST00000106791	ENSMUSP00000102403	TRANSLATION	protein_coding	-	CCDS72012.1	1	717	12	6.38	0.5	288.2	0	-4,-5	-	-	15.474	MINOR
ENSMUSG00000118298	Vmn1r60	ENSMUST00000237052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118298	Vmn1r60	ENSMUST00000173782	ENSMUSP00000133943	TRANSLATION	protein_coding	-	CCDS51985.1	-	300	0	0	0.5	58.5	5	1,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000118298	Vmn1r60	ENSMUST00000236262	ENSMUSP00000157873	TRANSLATION	protein_coding	-	-	-	310	0	0	0	58.5	5	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000038387	Rras	ENSMUST00000210895	ENSMUSP00000147980	TRANSLATION	protein_coding	stop	-	5	57	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000038387	Rras	ENSMUST00000044111	ENSMUSP00000042150	TRANSLATION	protein_coding	-	CCDS21226.1	1	218	26	5.89	7.5	187.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000038387	Rras	ENSMUST00000210397	ENSMUSP00000147508	TRANSLATION	nonsense_mediated_decay	start	-	5	107	17	2.83	0	104.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051113	Fam71e1	ENSMUST00000107927	ENSMUSP00000103560	TRANSLATION	protein_coding	-	CCDS52232.1	1	212	0	0	0.5	61.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000051113	Fam71e1	ENSMUST00000205819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051113	Fam71e1	ENSMUST00000206965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051113	Fam71e1	ENSMUST00000206398	ENSMUSP00000145737	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051113	Fam71e1	ENSMUST00000205422	ENSMUSP00000146329	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051113	Fam71e1	ENSMUST00000206195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051113	Fam71e1	ENSMUST00000205397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051113	Fam71e1	ENSMUST00000206033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051113	Fam71e1	ENSMUST00000205359	ENSMUSP00000145700	TRANSLATION	protein_coding	-	-	2	272	0	0	0.5	61.1	0	-4,-7	-	-	5.94	ALTERNATIVE:2
ENSMUSG00000051180	Olfr522	ENSMUST00000050585	ENSMUSP00000057288	TRANSLATION	protein_coding	-	CCDS21967.1	-	312	0	0.36	1.5	183.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059042	Klk1b9	ENSMUST00000081399	ENSMUSP00000080133	TRANSLATION	protein_coding	-	CCDS21191.1	1	261	7	4.3	0.5	241.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031021	Tmem9b	ENSMUST00000128043	ENSMUSP00000121220	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000031021	Tmem9b	ENSMUST00000033333	ENSMUSP00000033333	TRANSLATION	protein_coding	-	CCDS21738.1	1	199	0	0	5.1	185.8	1	3,-2	-	-	8.016	PRINCIPAL:2
ENSMUSG00000031021	Tmem9b	ENSMUST00000118571	ENSMUSP00000113175	TRANSLATION	protein_coding	-	-	1	124	0	0	7.1	159.7	1	-4,-6	-	-	7.434	ALTERNATIVE:1
ENSMUSG00000030882	Dnhd1	ENSMUST00000106776	ENSMUSP00000102388	TRANSLATION	protein_coding	-	-	1	285	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030882	Dnhd1	ENSMUST00000145988	ENSMUSP00000121261	TRANSLATION	protein_coding	-	-	5	4750	15	1.74	0.5	616.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030882	Dnhd1	ENSMUST00000128388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030839	Sergef	ENSMUST00000135035	ENSMUSP00000116461	TRANSLATION	protein_coding	stop	-	3	198	0	2.6	0	67.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030839	Sergef	ENSMUST00000033127	ENSMUSP00000033127	TRANSLATION	protein_coding	-	CCDS21279.1	1	464	0	7.1	0.5	207.6	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030839	Sergef	ENSMUST00000125825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030839	Sergef	ENSMUST00000137988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030839	Sergef	ENSMUST00000156147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030839	Sergef	ENSMUST00000216505	ENSMUSP00000150835	TRANSLATION	nonsense_mediated_decay	-	-	5	389	0	6.68	0	173.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000062944	9130023H24Rik	ENSMUST00000078816	ENSMUSP00000077867	TRANSLATION	protein_coding	-	CCDS40151.1	-	337	36	0.8	1.5	190	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031023	Akip1	ENSMUST00000033335	ENSMUSP00000033335	TRANSLATION	protein_coding	-	CCDS21736.1	1	212	0	0	1.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000031023	Akip1	ENSMUST00000147497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031023	Akip1	ENSMUST00000143581	ENSMUSP00000115021	TRANSLATION	protein_coding	stop	-	5	153	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030652	Coq7	ENSMUST00000207046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030652	Coq7	ENSMUST00000098090	ENSMUSP00000095695	TRANSLATION	protein_coding	-	CCDS80794.1	1	337	6	0	0.5	219.9	0	-4,0	-	-	9.96	MINOR
ENSMUSG00000030652	Coq7	ENSMUST00000209146	ENSMUSP00000146797	TRANSLATION	protein_coding	-	-	3	222	6	0	0	221.6	0	-4,0	-	-	10.062	MINOR
ENSMUSG00000030652	Coq7	ENSMUST00000127700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030652	Coq7	ENSMUST00000032887	ENSMUSP00000032887	TRANSLATION	protein_coding	-	CCDS21771.1	1	217	6	0	5.3	253.9	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000063297	Luzp2	ENSMUST00000082373	ENSMUSP00000080979	TRANSLATION	protein_coding	-	CCDS39970.1	1	345	0	0	1.5	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000063297	Luzp2	ENSMUST00000206923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090967	Vmn2r61	ENSMUST00000166131	ENSMUSP00000129576	TRANSLATION	protein_coding	-	CCDS52216.1	5	865	0	3.46	1.5	393.2	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000006310	Zbtb32	ENSMUST00000108150	ENSMUSP00000103785	TRANSLATION	protein_coding	-	-	1	101	10	0.93	0	22.2	0	-4,-6	-	-	8.76	MINOR
ENSMUSG00000006310	Zbtb32	ENSMUST00000108151	ENSMUSP00000103786	TRANSLATION	protein_coding	-	CCDS21102.1	5	465	12	2.33	0.5	78.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000006310	Zbtb32	ENSMUST00000144532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060314	Zfp941	ENSMUST00000150053	ENSMUSP00000147965	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	1	0	87.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060314	Zfp941	ENSMUST00000080651	ENSMUSP00000079482	TRANSLATION	protein_coding	-	-	1	674	42	1.4	0	293.8	0	-4,-5	-	-	13.74	MINOR
ENSMUSG00000060314	Zfp941	ENSMUST00000106052	ENSMUSP00000101667	TRANSLATION	protein_coding	-	CCDS40175.1	1	671	44	1.9	0.5	316.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056509	Gm9999	ENSMUST00000188312	ENSMUSP00000156094	TRANSLATION	protein_coding	-	-	2	53	0	0	1.2	0	0	-1,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000056509	Gm9999	ENSMUST00000070660	ENSMUSP00000146705	TRANSLATION	protein_coding	-	-	1	53	0	0	1.2	0	0	-1,-4	-	-	0	PRINCIPAL:5
ENSMUSG00000056509	Gm9999	ENSMUST00000185832	ENSMUSP00000145226	TRANSLATION	protein_coding	-	-	1	40	0	0	0	0	0	0,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000074093	Svip	ENSMUST00000207457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074093	Svip	ENSMUST00000098414	ENSMUSP00000096014	TRANSLATION	protein_coding	-	CCDS57551.1	1	77	0	0	7.5	83.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000074093	Svip	ENSMUST00000209193	ENSMUSP00000146410	TRANSLATION	protein_coding	-	-	1	67	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000042105	Inpp5f	ENSMUST00000142075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042105	Inpp5f	ENSMUST00000148815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042105	Inpp5f	ENSMUST00000098007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042105	Inpp5f	ENSMUST00000118605	ENSMUSP00000113700	TRANSLATION	protein_coding	-	CCDS85430.1	1	505	0	3.83	0.5	50.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042105	Inpp5f	ENSMUST00000130789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042105	Inpp5f	ENSMUST00000043138	ENSMUSP00000045910	TRANSLATION	protein_coding	-	CCDS21899.1	1	1132	0	10.27	1.5	398.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042105	Inpp5f	ENSMUST00000151237	ENSMUSP00000146197	TRANSLATION	protein_coding	-	-	1	441	0	1.75	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000042105	Inpp5f	ENSMUST00000129085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042105	Inpp5f	ENSMUST00000202419	ENSMUSP00000143952	TRANSLATION	nonsense_mediated_decay	-	-	5	121	0	0	0	35.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073894	Rbmxl2	ENSMUST00000098135	ENSMUSP00000095739	TRANSLATION	protein_coding	-	CCDS21689.1	-	385	0	0.6	0.5	140.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052508	Olfr536	ENSMUST00000211326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052508	Olfr536	ENSMUST00000064392	ENSMUSP00000067699	TRANSLATION	protein_coding	-	CCDS21979.1	1	307	0	0.96	1.5	161.6	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052508	Olfr536	ENSMUST00000215340	ENSMUSP00000149744	TRANSLATION	protein_coding	-	CCDS21979.1	5	307	0	0.96	1.5	161.6	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052508	Olfr536	ENSMUST00000209873	ENSMUSP00000148246	TRANSLATION	protein_coding	stop	-	3	77	0	0.48	0	27	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052508	Olfr536	ENSMUST00000215768	ENSMUSP00000149758	TRANSLATION	protein_coding	-	CCDS21979.1	5	307	0	0.96	1.5	161.6	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039745	Htatip2	ENSMUST00000208048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039745	Htatip2	ENSMUST00000085272	ENSMUSP00000082374	TRANSLATION	protein_coding	-	CCDS52260.1	1	242	26	4.75	2.7	38.3	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000039745	Htatip2	ENSMUST00000207895	ENSMUSP00000146858	TRANSLATION	protein_coding	-	CCDS85310.1	1	275	26	4.75	1.5	37.8	0	-1,-4	-	-	17.922	ALTERNATIVE:2
ENSMUSG00000030638	Sh3gl3	ENSMUST00000179318	ENSMUSP00000137621	TRANSLATION	protein_coding	-	-	5	312	0	7.43	4.6	267.1	0	-4,-5	-	-	8.38	MINOR
ENSMUSG00000030638	Sh3gl3	ENSMUST00000179800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030638	Sh3gl3	ENSMUST00000179150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030638	Sh3gl3	ENSMUST00000180183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030638	Sh3gl3	ENSMUST00000180243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030638	Sh3gl3	ENSMUST00000032874	ENSMUSP00000032874	TRANSLATION	protein_coding	-	-	1	347	0	8.68	5.1	315	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000030638	Sh3gl3	ENSMUST00000177895	ENSMUSP00000137570	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	2	0	70.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030638	Sh3gl3	ENSMUST00000178526	ENSMUSP00000137482	TRANSLATION	protein_coding	start	-	5	132	0	2.33	0	121.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030638	Sh3gl3	ENSMUST00000177883	ENSMUSP00000137207	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	2	0	70.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070841	Vmn2r34	ENSMUST00000173459	ENSMUSP00000133841	TRANSLATION	protein_coding	-	CCDS57480.1	5	852	0	2.68	1.5	372.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000004609	Cd33	ENSMUST00000039861	ENSMUSP00000045458	TRANSLATION	protein_coding	-	CCDS21173.1	1	334	0	2.75	0.5	71.9	1	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000004609	Cd33	ENSMUST00000205503	ENSMUSP00000146225	TRANSLATION	protein_coding	-	CCDS21173.1	1	334	0	2.75	0.5	71.9	1	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000004609	Cd33	ENSMUST00000206977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004609	Cd33	ENSMUST00000004728	ENSMUSP00000004728	TRANSLATION	protein_coding	-	CCDS52224.1	1	403	0	2.75	0.5	71.9	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000004609	Cd33	ENSMUST00000206371	ENSMUSP00000145596	TRANSLATION	protein_coding	start	-	5	240	0	1.75	0	23.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000004609	Cd33	ENSMUST00000205687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056592	Zfp658	ENSMUST00000107972	ENSMUSP00000103606	TRANSLATION	protein_coding	-	CCDS39931.1	1	887	87	1.2	0.5	490.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000056592	Zfp658	ENSMUST00000005597	ENSMUSP00000005597	TRANSLATION	protein_coding	-	CCDS39931.1	1	887	87	1.2	0.5	490.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000051200	Olfr513	ENSMUST00000214670	ENSMUSP00000149440	TRANSLATION	protein_coding	-	CCDS21726.1	5	309	0	0.2	7.6	186.2	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000051200	Olfr513	ENSMUST00000055146	ENSMUSP00000050578	TRANSLATION	protein_coding	-	CCDS21726.1	-	309	0	0.2	7.6	186.2	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042462	Dctpp1	ENSMUST00000035276	ENSMUSP00000047845	TRANSLATION	protein_coding	-	CCDS21862.1	1	170	4	3	1.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000096304	Gm16451	ENSMUST00000173484	ENSMUSP00000133729	TRANSLATION	protein_coding	-	CCDS71905.1	-	307	0	0	1.5	56.2	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000014418	Hps5	ENSMUST00000152759	ENSMUSP00000115786	TRANSLATION	protein_coding	stop	-	3	202	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000107654	ENSMUSP00000103281	TRANSLATION	protein_coding	-	CCDS21286.1	5	1126	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000014418	Hps5	ENSMUST00000153789	ENSMUSP00000119876	TRANSLATION	protein_coding	start/stop	-	5	534	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000211471	ENSMUSP00000147976	TRANSLATION	protein_coding	start/stop	-	5	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000107653	ENSMUSP00000103280	TRANSLATION	protein_coding	-	CCDS52254.1	1	1093	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000014418	Hps5	ENSMUST00000142663	ENSMUSP00000122887	TRANSLATION	nonsense_mediated_decay	-	-	1	526	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000138480	ENSMUSP00000147750	TRANSLATION	nonsense_mediated_decay	start	-	3	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000143627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014418	Hps5	ENSMUST00000157026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014418	Hps5	ENSMUST00000211347	ENSMUSP00000147450	TRANSLATION	nonsense_mediated_decay	-	-	1	204	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000145776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014418	Hps5	ENSMUST00000014562	ENSMUSP00000014562	TRANSLATION	protein_coding	-	CCDS21286.1	1	1126	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000014418	Hps5	ENSMUST00000211571	ENSMUSP00000147406	TRANSLATION	protein_coding	start	-	5	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000123725	ENSMUSP00000116770	TRANSLATION	protein_coding	stop	-	2	119	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014418	Hps5	ENSMUST00000130365	ENSMUSP00000114384	TRANSLATION	protein_coding	start/stop	-	5	253	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066129	Kndc1	ENSMUST00000210154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066129	Kndc1	ENSMUST00000053445	ENSMUSP00000050586	TRANSLATION	protein_coding	-	-	5	1742	0	3.435	0.5	159.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066129	Kndc1	ENSMUST00000121839	ENSMUSP00000113856	TRANSLATION	protein_coding	-	-	2	572	0	0	0	40.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000066129	Kndc1	ENSMUST00000156941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066129	Kndc1	ENSMUST00000154782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030697	Ppp4c	ENSMUST00000205862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030697	Ppp4c	ENSMUST00000205950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030697	Ppp4c	ENSMUST00000205879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030697	Ppp4c	ENSMUST00000206477	ENSMUSP00000146013	TRANSLATION	protein_coding	start	-	3	104	2	2	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030697	Ppp4c	ENSMUST00000206261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030697	Ppp4c	ENSMUST00000032936	ENSMUSP00000032936	TRANSLATION	protein_coding	-	CCDS21844.1	1	307	10	6.87	15.5	137.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030697	Ppp4c	ENSMUST00000206570	ENSMUSP00000146245	TRANSLATION	protein_coding	-	CCDS21844.1	1	307	10	6.87	15.5	137.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030697	Ppp4c	ENSMUST00000205786	ENSMUSP00000146202	TRANSLATION	protein_coding	start	-	3	157	3	3.13	0	41.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030697	Ppp4c	ENSMUST00000205935	ENSMUSP00000146240	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	1.014	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030697	Ppp4c	ENSMUST00000206334	ENSMUSP00000146180	TRANSLATION	nonsense_mediated_decay	start	-	3	53	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030697	Ppp4c	ENSMUST00000206353	ENSMUSP00000146088	TRANSLATION	protein_coding	start/stop	-	5	100	6	2.99	0	37.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048782	Insc	ENSMUST00000161800	ENSMUSP00000125061	TRANSLATION	protein_coding	stop	-	5	88	0	0.75	0	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048782	Insc	ENSMUST00000136347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048782	Insc	ENSMUST00000139670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048782	Insc	ENSMUST00000117543	ENSMUSP00000112682	TRANSLATION	protein_coding	-	CCDS40095.2	5	532	0	1.65	5.3	107.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000048782	Insc	ENSMUST00000206274	ENSMUSP00000145636	TRANSLATION	protein_coding	start/stop	-	3	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048782	Insc	ENSMUST00000169913	ENSMUSP00000129505	TRANSLATION	protein_coding	-	CCDS40095.2	5	532	0	1.65	5.3	107.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000048782	Insc	ENSMUST00000151464	ENSMUSP00000117296	TRANSLATION	protein_coding	stop	-	1	53	0	1.25	0	78.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048782	Insc	ENSMUST00000136645	ENSMUSP00000119459	TRANSLATION	protein_coding	stop	-	2	133	0	1.65	0	107.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048782	Insc	ENSMUST00000150991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051550	Zfp579	ENSMUST00000162502	ENSMUSP00000124074	TRANSLATION	protein_coding	stop	-	2	236	12	0.2	0	58.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051550	Zfp579	ENSMUST00000160808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051550	Zfp579	ENSMUST00000162731	ENSMUSP00000123963	TRANSLATION	protein_coding	-	CCDS39744.1	-	562	32	0.62	0.5	149.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051550	Zfp579	ENSMUST00000160225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051550	Zfp579	ENSMUST00000159754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051550	Zfp579	ENSMUST00000108572	ENSMUSP00000104212	TRANSLATION	protein_coding	-	CCDS39744.1	2	562	32	0.62	0.5	149.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044562	Rasip1	ENSMUST00000057927	ENSMUSP00000062429	TRANSLATION	protein_coding	-	CCDS21256.1	1	961	0	2.89	1.5	126.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054054	Olfr309	ENSMUST00000174158	ENSMUSP00000134377	TRANSLATION	protein_coding	-	CCDS21424.1	2	308	0	0.2	6.3	187	7	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054054	Olfr309	ENSMUST00000055690	ENSMUSP00000061929	TRANSLATION	protein_coding	-	CCDS21424.1	-	308	0	0.2	6.3	187	7	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034825	Nrip3	ENSMUST00000207400	ENSMUSP00000147090	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034825	Nrip3	ENSMUST00000041460	ENSMUSP00000044116	TRANSLATION	protein_coding	-	-	1	251	1	2.01	1.2	46.3	0	-4,-7	-	-	12.09	MINOR
ENSMUSG00000034825	Nrip3	ENSMUST00000033331	ENSMUSP00000033331	TRANSLATION	protein_coding	-	CCDS21739.1	1	240	1	2.01	7.6	46.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066804	Vmn1r83	ENSMUST00000086229	ENSMUSP00000083406	TRANSLATION	protein_coding	-	CCDS20807.1	-	306	0	0	1.5	94.5	4	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000066804	Vmn1r83	ENSMUST00000226701	ENSMUSP00000154521	TRANSLATION	protein_coding	-	CCDS20807.1	-	306	0	0	1.5	94.5	4	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000058014	Olfr502	ENSMUST00000216919	ENSMUSP00000151167	TRANSLATION	protein_coding	-	CCDS21717.1	5	314	0	0	3.9	182.6	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000058014	Olfr502	ENSMUST00000078933	ENSMUSP00000077963	TRANSLATION	protein_coding	-	CCDS21717.1	-	314	0	0	3.9	182.6	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000090762	Vmn2r56	ENSMUST00000233304	ENSMUSP00000156754	TRANSLATION	protein_coding	-	-	-	865	7	4.52	0	447.9	10	-1,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000090762	Vmn2r56	ENSMUST00000233874	ENSMUSP00000156775	TRANSLATION	protein_coding	-	-	-	512	7	2.24	0	151.6	1	-1,-4	-	-	7.44	MINOR
ENSMUSG00000090762	Vmn2r56	ENSMUST00000163852	ENSMUSP00000129566	TRANSLATION	protein_coding	-	CCDS52020.1	5	779	7	4.28	0.5	447.9	9	-4,-6	-	-	17.52	PRINCIPAL:2
ENSMUSG00000090762	Vmn2r56	ENSMUST00000233373	ENSMUSP00000156791	TRANSLATION	protein_coding	-	-	-	553	7	3.04	0	186.4	1	-1,-4	-	-	9.042	MINOR
ENSMUSG00000090762	Vmn2r56	ENSMUST00000233902	ENSMUSP00000156571	TRANSLATION	protein_coding	-	-	-	824	7	3.72	0	413.1	10	-1,-4	-	-	14.31	MINOR
ENSMUSG00000096069	Olfr61	ENSMUST00000210241	ENSMUSP00000147819	TRANSLATION	protein_coding	-	CCDS52435.1	5	311	0	1.22	1.5	205.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096069	Olfr61	ENSMUST00000084455	ENSMUSP00000081493	TRANSLATION	protein_coding	-	CCDS52435.1	-	311	0	1.22	1.5	205.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096069	Olfr61	ENSMUST00000210373	ENSMUSP00000147994	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	39.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000096069	Olfr61	ENSMUST00000211685	ENSMUSP00000147924	TRANSLATION	protein_coding	-	CCDS52435.1	2	311	0	1.22	1.5	205.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073969	Olfr556	ENSMUST00000098219	ENSMUSP00000095822	TRANSLATION	protein_coding	-	CCDS21541.1	-	324	0	0.48	1.5	283.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073969	Olfr556	ENSMUST00000213485	ENSMUSP00000149041	TRANSLATION	protein_coding	-	CCDS21541.1	5	324	0	0.48	1.5	283.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073969	Olfr556	ENSMUST00000217526	ENSMUSP00000150289	TRANSLATION	protein_coding	-	CCDS21541.1	5	324	0	0.48	1.5	283.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043073	Usp17le	ENSMUST00000053464	ENSMUSP00000051716	TRANSLATION	protein_coding	stop	-	5	542	12	0.42	0.5	174	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043073	Usp17le	ENSMUST00000211384	ENSMUSP00000147776	TRANSLATION	protein_coding	-	CCDS85368.1	1	540	12	0.42	0.5	174	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096903	Vmn1r104	ENSMUST00000169689	ENSMUSP00000127493	TRANSLATION	protein_coding	-	CCDS52076.1	-	307	0	0	1.5	56.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030472	Ceacam18	ENSMUST00000032663	ENSMUSP00000032663	TRANSLATION	protein_coding	-	CCDS21177.1	1	376	0	1.72	0.5	36.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000073967	Olfr557	ENSMUST00000098218	ENSMUSP00000095821	TRANSLATION	protein_coding	-	CCDS21542.1	-	322	0	0.16	3.9	376.3	7	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073967	Olfr557	ENSMUST00000215423	ENSMUSP00000150621	TRANSLATION	protein_coding	-	CCDS21542.1	5	322	0	0.16	3.9	376.3	7	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000049761	Pmis2	ENSMUST00000051495	ENSMUSP00000144806	TRANSLATION	protein_coding	-	-	1	96	0	0	0	56.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000049761	Pmis2	ENSMUST00000186845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030739	Myh14	ENSMUST00000208131	ENSMUSP00000146584	TRANSLATION	protein_coding	stop	-	2	120	0	1	0	26.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030739	Myh14	ENSMUST00000107899	ENSMUSP00000103531	TRANSLATION	protein_coding	-	CCDS39943.1	1	1992	16	33.934	0.5	2484	0	-4,-1	-	-	17.436	PRINCIPAL:3
ENSMUSG00000030739	Myh14	ENSMUST00000208044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030739	Myh14	ENSMUST00000208200	ENSMUSP00000146686	TRANSLATION	protein_coding	start	-	1	1245	1	22.75	0	1145	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030739	Myh14	ENSMUST00000048102	ENSMUSP00000046059	TRANSLATION	protein_coding	-	CCDS71951.1	1	2000	16	34.132	0.5	2485.4	0	-4,-1	-	-	17.916	ALTERNATIVE:2
ENSMUSG00000030739	Myh14	ENSMUST00000209024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030739	Myh14	ENSMUST00000107900	ENSMUSP00000103532	TRANSLATION	protein_coding	-	-	5	2000	16	34	0	2483.8	0	-4,-1	-	-	17.556	ALTERNATIVE:2
ENSMUSG00000030739	Myh14	ENSMUST00000208085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030739	Myh14	ENSMUST00000207775	ENSMUSP00000147115	TRANSLATION	protein_coding	-	-	5	2033	16	34.174	0.5	2472.3	0	-4,-1	-	-	17.214	ALTERNATIVE:2
ENSMUSG00000045792	Olfr578	ENSMUST00000056235	ENSMUSP00000058167	TRANSLATION	protein_coding	-	CCDS21557.1	-	313	0	0.36	1.5	431.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045792	Olfr578	ENSMUST00000215606	ENSMUSP00000149209	TRANSLATION	protein_coding	-	CCDS21557.1	5	313	0	0.36	1.5	431.3	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094520	Olfr635	ENSMUST00000209473	ENSMUSP00000148103	TRANSLATION	protein_coding	-	-	5	315	0	0	5.9	397.4	7	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000094520	Olfr635	ENSMUST00000098185	ENSMUSP00000095788	TRANSLATION	protein_coding	-	CCDS21600.1	-	321	0	0	2.7	397.4	7	-4,-7	-	-	6.694	MINOR
ENSMUSG00000046321	Hs3st2	ENSMUST00000206880	ENSMUSP00000146027	TRANSLATION	protein_coding	-	-	1	176	9	0.8	0	27.4	0	-4,-7	-	-	2.664	MINOR
ENSMUSG00000046321	Hs3st2	ENSMUST00000084628	ENSMUSP00000081678	TRANSLATION	protein_coding	-	CCDS40115.1	1	367	21	1.8	7.6	159	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000052785	Olfr573-ps1	ENSMUST00000064830	ENSMUSP00000146786	TRANSLATION	protein_coding	stop	-	-	296	0	0.36	0	361.3	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000052785	Olfr573-ps1	ENSMUST00000210571	ENSMUSP00000147664	TRANSLATION	protein_coding	-	-	-	297	0	0.36	0	361.3	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073901	Olfr703	ENSMUST00000216254	ENSMUSP00000149022	TRANSLATION	protein_coding	-	CCDS21674.1	5	319	0	0.36	0.5	160.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073901	Olfr703	ENSMUST00000098142	ENSMUSP00000095746	TRANSLATION	protein_coding	-	CCDS21674.1	-	319	0	0.36	0.5	160.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063764	Olfr508	ENSMUST00000072914	ENSMUSP00000072686	TRANSLATION	protein_coding	-	CCDS21722.1	-	310	0	0.16	2.8	167	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096743	Vmn2r32	ENSMUST00000094866	ENSMUSP00000092462	TRANSLATION	protein_coding	-	CCDS51996.1	5	852	0	2.8	1.5	387.1	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000001794	Capns1	ENSMUST00000148973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001794	Capns1	ENSMUST00000146852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001794	Capns1	ENSMUST00000129761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001794	Capns1	ENSMUST00000141851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001794	Capns1	ENSMUST00000207082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001794	Capns1	ENSMUST00000001845	ENSMUSP00000001845	TRANSLATION	protein_coding	-	CCDS21082.1	5	268	28	6.028	1.7	27.4	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000001794	Capns1	ENSMUST00000108196	ENSMUSP00000103831	TRANSLATION	protein_coding	-	-	1	200	28	6.028	2.4	27.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000001794	Capns1	ENSMUST00000126116	ENSMUSP00000117951	TRANSLATION	protein_coding	-	CCDS21082.1	1	268	28	6.028	1.7	27.4	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000052187	Hbb-y	ENSMUST00000033229	ENSMUSP00000033229	TRANSLATION	protein_coding	-	CCDS21593.1	1	147	20	3	15	109.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000070520	Nsmce3	ENSMUST00000094331	ENSMUSP00000091889	TRANSLATION	protein_coding	-	CCDS21337.1	-	279	0	1	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000109511	Nup62	ENSMUST00000207103	ENSMUSP00000147181	TRANSLATION	protein_coding	-	CCDS21216.1	1	526	0	2.8	1.5	130.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109511	Nup62	ENSMUST00000208172	ENSMUSP00000147109	TRANSLATION	protein_coding	stop	-	2	159	0	1.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000109511	Nup62	ENSMUST00000208626	ENSMUSP00000146695	TRANSLATION	protein_coding	-	CCDS21216.1	5	526	0	2.8	1.5	130.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109511	Nup62	ENSMUST00000207085	ENSMUSP00000147215	TRANSLATION	protein_coding	stop	-	2	42	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000109511	Nup62	ENSMUST00000057195	ENSMUSP00000056785	TRANSLATION	protein_coding	-	CCDS21216.1	1	526	0	2.8	1.5	130.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025469	Msx3	ENSMUST00000172775	ENSMUSP00000133484	TRANSLATION	protein_coding	-	CCDS21961.1	1	204	0	1.6	1.5	76.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025469	Msx3	ENSMUST00000055353	ENSMUSP00000057312	TRANSLATION	protein_coding	-	CCDS85451.1	1	146	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055652	Klhl25	ENSMUST00000171155	ENSMUSP00000133175	TRANSLATION	protein_coding	-	CCDS21369.1	1	589	0	1.88	19.5	364.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000055652	Klhl25	ENSMUST00000205887	ENSMUSP00000145600	TRANSLATION	protein_coding	stop	-	3	93	0	0.6	0	49	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055652	Klhl25	ENSMUST00000205612	ENSMUSP00000146192	TRANSLATION	protein_coding	-	-	1	284	0	0.48	0	166.2	0	-4,-5	-	-	1.53	MINOR
ENSMUSG00000055652	Klhl25	ENSMUST00000206418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055652	Klhl25	ENSMUST00000206019	ENSMUSP00000146102	TRANSLATION	protein_coding	-	CCDS21369.1	1	589	0	1.88	19.5	364.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000055652	Klhl25	ENSMUST00000092073	ENSMUSP00000089707	TRANSLATION	protein_coding	-	CCDS21369.1	1	589	0	1.88	19.5	364.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000066820	Vmn2r28	ENSMUST00000086297	ENSMUSP00000083477	TRANSLATION	protein_coding	-	CCDS39748.1	5	852	4	3.26	0.5	383.3	17	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000066820	Vmn2r28	ENSMUST00000232789	ENSMUSP00000156727	TRANSLATION	protein_coding	-	-	-	373	2	2.06	0	176.6	12	3,-2	-	-	5.6	MINOR
ENSMUSG00000066820	Vmn2r28	ENSMUST00000233941	ENSMUSP00000156623	TRANSLATION	protein_coding	-	-	-	505	4	2.42	0	272.9	17	3,-2	-	-	8.32	MINOR
ENSMUSG00000066820	Vmn2r28	ENSMUST00000233742	ENSMUSP00000156869	TRANSLATION	protein_coding	-	-	-	776	4	2.78	0	378.3	17	3,-2	-	-	14.74	MINOR
ENSMUSG00000066820	Vmn2r28	ENSMUST00000233239	ENSMUSP00000156457	TRANSLATION	protein_coding	-	-	-	644	2	2.42	0	283	12	3,-2	-	-	6.32	MINOR
ENSMUSG00000066820	Vmn2r28	ENSMUST00000233390	ENSMUSP00000156403	TRANSLATION	protein_coding	-	-	-	720	2	2.9	0	288	12	3,-2	-	-	7.562	MINOR
ENSMUSG00000043671	Dpy19l3	ENSMUST00000143590	ENSMUSP00000123340	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	2	-2,-7	-	-	-1	MINOR
ENSMUSG00000043671	Dpy19l3	ENSMUST00000127782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043671	Dpy19l3	ENSMUST00000155993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043671	Dpy19l3	ENSMUST00000150862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043671	Dpy19l3	ENSMUST00000051377	ENSMUSP00000054747	TRANSLATION	protein_coding	-	CCDS21155.1	1	716	0	0	1.5	800.7	11	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043671	Dpy19l3	ENSMUST00000205751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043671	Dpy19l3	ENSMUST00000206004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043671	Dpy19l3	ENSMUST00000155451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043671	Dpy19l3	ENSMUST00000144416	ENSMUSP00000122489	TRANSLATION	nonsense_mediated_decay	start	-	5	114	0	0	0	165	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000043671	Dpy19l3	ENSMUST00000124116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070816	Vmn1r86	ENSMUST00000226604	ENSMUSP00000154276	TRANSLATION	protein_coding	-	CCDS52025.1	-	316	0	0	1.5	103.1	4	-2,-5	-	-	5.934	PRINCIPAL:1
ENSMUSG00000070816	Vmn1r86	ENSMUST00000227700	ENSMUSP00000154464	TRANSLATION	protein_coding	-	-	-	266	0	0	0	104.2	3	-4,-5	-	-	6	MINOR
ENSMUSG00000070816	Vmn1r86	ENSMUST00000094828	ENSMUSP00000092423	TRANSLATION	protein_coding	-	CCDS52025.1	-	316	0	0	1.5	103.1	4	-2,-5	-	-	5.934	PRINCIPAL:1
ENSMUSG00000070816	Vmn1r86	ENSMUST00000227220	ENSMUSP00000154549	TRANSLATION	protein_coding	-	CCDS52025.1	-	316	0	0	1.5	103.1	4	-2,-5	-	-	5.934	PRINCIPAL:1
ENSMUSG00000002210	Smg9	ENSMUST00000002280	ENSMUSP00000002280	TRANSLATION	protein_coding	-	CCDS20949.1	1	520	0	3.67	7.5	22.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002210	Smg9	ENSMUST00000139481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002210	Smg9	ENSMUST00000123188	ENSMUSP00000114943	TRANSLATION	protein_coding	start/stop	-	5	118	0	1.03	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002210	Smg9	ENSMUST00000146686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002210	Smg9	ENSMUST00000108434	ENSMUSP00000104073	TRANSLATION	protein_coding	stop	-	3	210	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002210	Smg9	ENSMUST00000148288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002210	Smg9	ENSMUST00000146381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030877	Mfsd13b	ENSMUST00000033166	ENSMUSP00000033166	TRANSLATION	protein_coding	-	CCDS52384.1	1	454	0	0	1.5	52.4	19	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000030877	Mfsd13b	ENSMUST00000133939	ENSMUSP00000121409	TRANSLATION	protein_coding	start	-	3	165	0	0	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000030877	Mfsd13b	ENSMUST00000138177	ENSMUSP00000115200	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030877	Mfsd13b	ENSMUST00000149535	ENSMUSP00000115341	TRANSLATION	protein_coding	stop	-	3	143	0	0	0	0	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000030877	Mfsd13b	ENSMUST00000216241	ENSMUSP00000150654	TRANSLATION	protein_coding	-	-	5	455	0	0	1.5	52.4	19	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037463	Fbxo27	ENSMUST00000127368	ENSMUSP00000146553	TRANSLATION	protein_coding	start	-	3	46	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037463	Fbxo27	ENSMUST00000039998	ENSMUSP00000038432	TRANSLATION	protein_coding	-	CCDS21051.1	1	279	0	4.8	3.9	272.4	0	-4,-7	-	-	12.706	PRINCIPAL:3
ENSMUSG00000037463	Fbxo27	ENSMUST00000108281	ENSMUSP00000103916	TRANSLATION	protein_coding	-	CCDS52164.1	1	280	0	4.8	3.9	277.3	0	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000037463	Fbxo27	ENSMUST00000151227	ENSMUSP00000116838	TRANSLATION	protein_coding	stop	-	3	73	0	0.8	0	48.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037463	Fbxo27	ENSMUST00000108280	ENSMUSP00000103915	TRANSLATION	protein_coding	-	-	1	156	0	3.4	0	203.7	0	-4,-6	-	-	4.782	MINOR
ENSMUSG00000066704	Cyp2b19	ENSMUST00000077855	ENSMUSP00000077021	TRANSLATION	protein_coding	-	CCDS21006.1	1	492	34	9	1.5	498.5	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000066704	Cyp2b19	ENSMUST00000138018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066704	Cyp2b19	ENSMUST00000132315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095730	Vmn2r29	ENSMUST00000209613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095730	Vmn2r29	ENSMUST00000170922	ENSMUSP00000131990	TRANSLATION	protein_coding	-	CCDS51993.1	5	852	0	4.13	0.5	388.4	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000095730	Vmn2r29	ENSMUST00000211433	ENSMUSP00000147896	TRANSLATION	nonsense_mediated_decay	start	-	3	110	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068959	Zfp619	ENSMUST00000108015	ENSMUSP00000103650	TRANSLATION	protein_coding	-	CCDS39918.1	1	1161	132	1.15	0.5	520.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090362	Vmn2r79	ENSMUST00000233648	ENSMUSP00000156476	TRANSLATION	protein_coding	-	-	-	557	2	2.34	0	146.3	0	0,-4	-	-	6.512	MINOR
ENSMUSG00000090362	Vmn2r79	ENSMUST00000232908	ENSMUSP00000156544	TRANSLATION	nonsense_mediated_decay	-	-	-	179	0	0.42	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000090362	Vmn2r79	ENSMUST00000233714	ENSMUSP00000156924	TRANSLATION	protein_coding	-	-	-	563	2	2.604	0	154.9	0	0,-4	-	-	7.04	MINOR
ENSMUSG00000090362	Vmn2r79	ENSMUST00000233048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090362	Vmn2r79	ENSMUST00000233730	ENSMUSP00000156561	TRANSLATION	protein_coding	-	-	-	845	4	2.82	0	361.6	8	0,-4	-	-	14.956	ALTERNATIVE:2
ENSMUSG00000090362	Vmn2r79	ENSMUST00000164462	ENSMUSP00000132478	TRANSLATION	protein_coding	-	CCDS52303.1	5	851	4	3.084	0.5	370.2	8	0,-4	-	-	16	PRINCIPAL:2
ENSMUSG00000057176	Ccdc189	ENSMUST00000206891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057176	Ccdc189	ENSMUST00000205850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057176	Ccdc189	ENSMUST00000205839	ENSMUSP00000145691	TRANSLATION	protein_coding	start	-	3	156	0	0	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057176	Ccdc189	ENSMUST00000072155	ENSMUSP00000072019	TRANSLATION	protein_coding	-	CCDS21870.1	1	333	0	0	1.5	116.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057176	Ccdc189	ENSMUST00000206220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063801	Ap3s2	ENSMUST00000206725	ENSMUSP00000146264	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0.75	0	22.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063801	Ap3s2	ENSMUST00000075657	ENSMUSP00000075082	TRANSLATION	protein_coding	-	CCDS21389.1	1	193	0	3.5	21.5	176.5	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000058741	Prr19	ENSMUST00000080288	ENSMUSP00000104047	TRANSLATION	protein_coding	-	CCDS52147.1	1	366	0	0	2.7	639.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000030978	Rrm1	ENSMUST00000209630	ENSMUSP00000147865	TRANSLATION	nonsense_mediated_decay	start	-	3	65	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030978	Rrm1	ENSMUST00000211720	ENSMUSP00000147692	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030978	Rrm1	ENSMUST00000210543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030978	Rrm1	ENSMUST00000211493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030978	Rrm1	ENSMUST00000211786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030978	Rrm1	ENSMUST00000033283	ENSMUSP00000033283	TRANSLATION	protein_coding	-	CCDS40049.1	1	792	46	17.74	7.1	65.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030978	Rrm1	ENSMUST00000210751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067616	Klk11	ENSMUST00000205566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067616	Klk11	ENSMUST00000080211	ENSMUSP00000079101	TRANSLATION	protein_coding	-	CCDS52227.1	1	276	19	4.4	0.5	231.8	0	-4,-2	-	-	18	MINOR
ENSMUSG00000067616	Klk11	ENSMUST00000205415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067616	Klk11	ENSMUST00000171458	ENSMUSP00000132721	TRANSLATION	protein_coding	-	CCDS39935.1	2	249	19	4.4	5.4	231.8	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000067616	Klk11	ENSMUST00000206165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106715	Tmem265	ENSMUST00000190278	ENSMUSP00000144111	TRANSLATION	protein_coding	-	-	3	60	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000106715	Tmem265	ENSMUST00000084563	ENSMUSP00000081611	TRANSLATION	protein_coding	-	CCDS80807.1	1	109	0	0	7.5	32.7	3	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000052353	Cemip	ENSMUST00000142518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052353	Cemip	ENSMUST00000150495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052353	Cemip	ENSMUST00000064174	ENSMUSP00000063277	TRANSLATION	protein_coding	-	CCDS21416.1	1	1361	0	1.45	2.9	268.2	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000052353	Cemip	ENSMUST00000145171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052353	Cemip	ENSMUST00000147578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030443	Zfp583	ENSMUST00000108560	ENSMUSP00000104200	TRANSLATION	protein_coding	-	CCDS39751.1	1	568	48	1.6	0.5	324.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030443	Zfp583	ENSMUST00000165705	ENSMUSP00000129551	TRANSLATION	protein_coding	-	CCDS39751.1	5	568	48	1.6	0.5	324.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030443	Zfp583	ENSMUST00000127658	ENSMUSP00000118249	TRANSLATION	protein_coding	stop	-	3	76	0	1	0	80	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030443	Zfp583	ENSMUST00000062765	ENSMUSP00000053935	TRANSLATION	protein_coding	-	CCDS39751.1	1	568	48	1.6	0.5	324.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030443	Zfp583	ENSMUST00000135435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030443	Zfp583	ENSMUST00000123868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036826	Igflr1	ENSMUST00000043850	ENSMUSP00000042312	TRANSLATION	protein_coding	-	CCDS39886.1	1	345	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000036826	Igflr1	ENSMUST00000172251	ENSMUSP00000132400	TRANSLATION	protein_coding	-	-	1	365	0	0	1	0	1	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025494	Sigirr	ENSMUST00000209199	ENSMUSP00000147444	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025494	Sigirr	ENSMUST00000210167	ENSMUSP00000147280	TRANSLATION	protein_coding	-	-	1	387	0	2.598	0	95.4	2	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025494	Sigirr	ENSMUST00000210941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025494	Sigirr	ENSMUST00000209294	ENSMUSP00000147541	TRANSLATION	protein_coding	-	CCDS40179.1	1	409	0	2.598	1.5	95.4	2	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025494	Sigirr	ENSMUST00000210978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025494	Sigirr	ENSMUST00000209352	ENSMUSP00000147853	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025494	Sigirr	ENSMUST00000097958	ENSMUSP00000095571	TRANSLATION	protein_coding	-	CCDS40179.1	1	409	0	2.598	1.5	95.4	2	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025494	Sigirr	ENSMUST00000209887	ENSMUSP00000147730	TRANSLATION	nonsense_mediated_decay	start	-	5	108	0	0	0	0	2	-3,-6	-	-	-1	MINOR
ENSMUSG00000057461	Olfr591	ENSMUST00000074272	ENSMUSP00000073884	TRANSLATION	protein_coding	-	CCDS21563.1	-	314	0	0.42	2.8	348.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057461	Olfr591	ENSMUST00000216581	ENSMUSP00000150894	TRANSLATION	protein_coding	-	CCDS21563.1	5	314	0	0.42	2.8	348.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057461	Olfr591	ENSMUST00000218115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030610	Det1	ENSMUST00000032839	ENSMUSP00000032839	TRANSLATION	protein_coding	-	CCDS21375.1	1	550	0	0	17	646.2	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000030610	Det1	ENSMUST00000107431	ENSMUSP00000103054	TRANSLATION	protein_coding	-	-	5	219	0	0	0	317.1	0	-4,-1	-	-	0	MINOR
ENSMUSG00000030610	Det1	ENSMUST00000138062	ENSMUSP00000145597	TRANSLATION	protein_coding	start	-	3	72	0	0	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037613	Tnfrsf23	ENSMUST00000208017	ENSMUSP00000146956	TRANSLATION	protein_coding	-	CCDS85480.1	3	131	0	1.4	0.5	22.2	0	4,-1	-	-	4.494	MINOR
ENSMUSG00000037613	Tnfrsf23	ENSMUST00000035742	ENSMUSP00000042431	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	1.4	0	22.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037613	Tnfrsf23	ENSMUST00000152703	ENSMUSP00000116742	TRANSLATION	protein_coding	-	CCDS22044.1	1	176	0	2.64	0.5	100.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037613	Tnfrsf23	ENSMUST00000208613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110012	Olfr644	ENSMUST00000077417	ENSMUSP00000076633	TRANSLATION	protein_coding	-	CCDS21606.1	-	314	0	0.2	5.1	406.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000110012	Olfr644	ENSMUST00000213184	ENSMUSP00000149070	TRANSLATION	protein_coding	-	CCDS21606.1	5	314	0	0.2	5.1	406.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000110012	Olfr644	ENSMUST00000213991	ENSMUSP00000149600	TRANSLATION	protein_coding	-	CCDS21606.1	5	314	0	0.2	5.1	406.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000092534	Pagr1b	ENSMUST00000172958	ENSMUSP00000134420	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	108	0	0	0	92.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000006021	Kptn	ENSMUST00000149255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000149388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000141430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000006178	ENSMUSP00000006178	TRANSLATION	protein_coding	-	CCDS20844.1	1	430	12	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006021	Kptn	ENSMUST00000152044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000130170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000129080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006021	Kptn	ENSMUST00000127584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039405	Prss23	ENSMUST00000207538	ENSMUSP00000146863	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039405	Prss23	ENSMUST00000208402	ENSMUSP00000147219	TRANSLATION	protein_coding	stop	-	2	167	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039405	Prss23	ENSMUST00000209118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039405	Prss23	ENSMUST00000207932	ENSMUSP00000147183	TRANSLATION	protein_coding	-	CCDS21442.1	1	382	4	0	1.5	41	0	4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000039405	Prss23	ENSMUST00000208888	ENSMUSP00000146389	TRANSLATION	protein_coding	stop	-	2	138	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039405	Prss23	ENSMUST00000041761	ENSMUSP00000045191	TRANSLATION	protein_coding	-	CCDS21442.1	1	382	4	0	1.5	41	0	4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000039405	Prss23	ENSMUST00000208903	ENSMUSP00000146825	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039405	Prss23	ENSMUST00000207636	ENSMUSP00000146384	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000053565	Eif3k	ENSMUST00000207683	ENSMUSP00000146940	TRANSLATION	protein_coding	-	CCDS85254.1	1	185	0	5.33	0.5	119.4	0	-4,-7	-	-	10.002	MINOR
ENSMUSG00000053565	Eif3k	ENSMUST00000066070	ENSMUSP00000066038	TRANSLATION	protein_coding	-	CCDS21062.1	1	218	0	6.33	13.7	119.4	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000053565	Eif3k	ENSMUST00000208810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053565	Eif3k	ENSMUST00000208707	ENSMUSP00000147087	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053565	Eif3k	ENSMUST00000207762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053565	Eif3k	ENSMUST00000208616	ENSMUSP00000147214	TRANSLATION	protein_coding	-	CCDS85255.1	1	192	0	5	0.5	119.4	0	-4,-7	-	-	9.342	MINOR
ENSMUSG00000097425	Vmn1r181	ENSMUST00000226978	ENSMUSP00000153788	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097425	Vmn1r181	ENSMUST00000228531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097425	Vmn1r181	ENSMUST00000228842	ENSMUSP00000154403	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097425	Vmn1r181	ENSMUST00000181796	ENSMUSP00000137685	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097425	Vmn1r181	ENSMUST00000226843	ENSMUSP00000154127	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097425	Vmn1r181	ENSMUST00000228607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097425	Vmn1r181	ENSMUST00000228399	ENSMUSP00000154337	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097425	Vmn1r181	ENSMUST00000227637	ENSMUSP00000153708	TRANSLATION	protein_coding	-	CCDS20938.1	-	304	0	0	1.5	47.3	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052217	Hbb-bh1	ENSMUST00000063957	ENSMUSP00000064865	TRANSLATION	protein_coding	-	CCDS21592.1	1	147	20	3	14.8	103.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030516	Tjp1	ENSMUST00000206228	ENSMUSP00000145910	TRANSLATION	protein_coding	stop	-	5	171	0	2.5	0	61.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030516	Tjp1	ENSMUST00000144961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030516	Tjp1	ENSMUST00000032729	ENSMUSP00000032729	TRANSLATION	protein_coding	-	CCDS52266.1	1	1685	0	17.05	2.9	380.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030516	Tjp1	ENSMUST00000102592	ENSMUSP00000099652	TRANSLATION	protein_coding	-	CCDS21338.1	1	1745	0	16.6	2.9	361.1	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000030516	Tjp1	ENSMUST00000206438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030516	Tjp1	ENSMUST00000132036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030516	Tjp1	ENSMUST00000206612	ENSMUSP00000146149	TRANSLATION	nonsense_mediated_decay	-	-	1	1128	0	13.85	0	256.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030711	Sult1a1	ENSMUST00000155419	ENSMUSP00000121514	TRANSLATION	protein_coding	stop	-	3	188	9	4.08	0	115.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030711	Sult1a1	ENSMUST00000106372	ENSMUSP00000101980	TRANSLATION	protein_coding	-	CCDS40128.1	1	263	20	6.33	0.5	257.7	0	-4,-5	-	-	13.956	MINOR
ENSMUSG00000030711	Sult1a1	ENSMUST00000106373	ENSMUSP00000101981	TRANSLATION	protein_coding	-	-	1	298	20	7.33	0.5	291.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036864	Proser3	ENSMUST00000208706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036864	Proser3	ENSMUST00000062708	ENSMUSP00000059135	TRANSLATION	protein_coding	-	CCDS21096.1	5	634	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000036864	Proser3	ENSMUST00000215288	ENSMUSP00000148912	TRANSLATION	protein_coding	-	-	5	660	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000036864	Proser3	ENSMUST00000134113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036864	Proser3	ENSMUST00000153594	ENSMUSP00000123095	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036864	Proser3	ENSMUST00000108165	ENSMUSP00000103800	TRANSLATION	protein_coding	-	CCDS21096.1	1	634	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000030787	Lyve1	ENSMUST00000033050	ENSMUSP00000033050	TRANSLATION	protein_coding	-	CCDS21748.1	1	318	0	1.8	0.5	69.2	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030787	Lyve1	ENSMUST00000209319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110103	Zscan4-ps1	ENSMUST00000165848	ENSMUSP00000131258	TRANSLATION	protein_coding	-	-	5	506	15	0.2	0.5	112.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095339	Zscan4b	ENSMUST00000210847	ENSMUSP00000148157	TRANSLATION	protein_coding	-	CCDS52011.1	5	505	15	0.4	0.5	110.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095339	Zscan4b	ENSMUST00000168158	ENSMUSP00000127301	TRANSLATION	protein_coding	-	CCDS52011.1	5	505	15	0.4	0.5	110.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095061	E030018B13Rik	ENSMUST00000177638	ENSMUSP00000136435	TRANSLATION	protein_coding	-	CCDS57554.1	1	113	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073955	Olfr593	ENSMUST00000098206	ENSMUSP00000095807	TRANSLATION	protein_coding	-	CCDS21565.1	-	327	0	0.42	2.7	352.8	8	-4,-7	-	-	12.586	PRINCIPAL:2
ENSMUSG00000073955	Olfr593	ENSMUST00000210686	ENSMUSP00000147588	TRANSLATION	protein_coding	-	-	-	316	0	0.42	3.9	352.8	8	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000090662	Vmn2r45	ENSMUST00000164845	ENSMUSP00000129466	TRANSLATION	protein_coding	-	CCDS57486.1	5	852	0	2.74	1.5	379.1	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000053338	Tarm1	ENSMUST00000065703	ENSMUSP00000069745	TRANSLATION	protein_coding	-	-	1	276	0	1.98	0	64.2	3	-2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000053338	Tarm1	ENSMUST00000203020	ENSMUSP00000145188	TRANSLATION	protein_coding	-	-	1	293	0	1.98	0.5	64.2	3	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000053338	Tarm1	ENSMUST00000203821	ENSMUSP00000145491	TRANSLATION	protein_coding	-	CCDS39727.1	1	288	0	1.98	0.5	64.2	3	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000025488	Cox8b	ENSMUST00000026561	ENSMUSP00000026561	TRANSLATION	protein_coding	-	CCDS21991.1	1	70	0	2	1.5	77.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000053367	Epp13	ENSMUST00000121024	ENSMUSP00000113155	TRANSLATION	protein_coding	-	CCDS51989.1	5	164	2	0	0.5	0	0	4,-1	-	-	2	PRINCIPAL:1
ENSMUSG00000053367	Epp13	ENSMUST00000155248	ENSMUSP00000116208	TRANSLATION	protein_coding	start	-	5	106	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053367	Epp13	ENSMUST00000128903	ENSMUSP00000146981	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054753	AU018091	ENSMUST00000203937	ENSMUSP00000144796	TRANSLATION	protein_coding	start/stop	-	2	178	0	0	0	32.5	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000054753	AU018091	ENSMUST00000205185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054753	AU018091	ENSMUST00000171749	ENSMUSP00000126800	TRANSLATION	protein_coding	-	CCDS39724.2	1	684	0	1.72	0.5	188.7	15	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055305	Zfp93	ENSMUST00000032696	ENSMUSP00000032696	TRANSLATION	protein_coding	-	CCDS39828.1	1	645	52	1.4	0.5	343.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055305	Zfp93	ENSMUST00000155851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055305	Zfp93	ENSMUST00000108438	ENSMUSP00000104077	TRANSLATION	protein_coding	-	CCDS39828.1	1	645	52	1.4	0.5	343.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000100512	Ovol3	ENSMUST00000189482	ENSMUSP00000140811	TRANSLATION	protein_coding	-	CCDS80691.1	5	189	15	1.2	7.5	63.1	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000048787	Dcun1d3	ENSMUST00000098080	ENSMUSP00000095686	TRANSLATION	protein_coding	-	CCDS21789.1	1	304	0	2.75	7.5	115.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048787	Dcun1d3	ENSMUST00000137888	ENSMUSP00000115386	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048787	Dcun1d3	ENSMUST00000059851	ENSMUSP00000058968	TRANSLATION	protein_coding	-	CCDS21789.1	1	304	0	2.75	7.5	115.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048787	Dcun1d3	ENSMUST00000106519	ENSMUSP00000102129	TRANSLATION	protein_coding	-	CCDS21789.1	5	304	0	2.75	7.5	115.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000048787	Dcun1d3	ENSMUST00000142120	ENSMUSP00000118439	TRANSLATION	protein_coding	stop	-	3	165	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048787	Dcun1d3	ENSMUST00000207488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048787	Dcun1d3	ENSMUST00000207233	ENSMUSP00000147253	TRANSLATION	protein_coding	-	CCDS21789.1	5	304	0	2.75	7.5	115.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000187989	ENSMUSP00000141178	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000190455	ENSMUSP00000140357	TRANSLATION	nonsense_mediated_decay	start	-	5	95	0	0.64	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000019248	ENSMUSP00000019248	TRANSLATION	protein_coding	-	CCDS21114.1	1	868	0	4.85	0.5	215.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000186333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030577	Cd22	ENSMUST00000190646	ENSMUSP00000140528	TRANSLATION	nonsense_mediated_decay	-	-	5	353	0	2.08	0	91.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000190170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030577	Cd22	ENSMUST00000108125	ENSMUSP00000103760	TRANSLATION	protein_coding	-	CCDS21114.1	1	868	0	4.85	0.5	215.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000187585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030577	Cd22	ENSMUST00000190753	ENSMUSP00000140014	TRANSLATION	protein_coding	stop	-	5	49	0	0.6	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000189718	ENSMUSP00000140521	TRANSLATION	protein_coding	-	CCDS21114.1	1	868	0	4.85	0.5	215.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000186154	ENSMUSP00000139685	TRANSLATION	protein_coding	-	CCDS21114.1	1	868	0	4.85	0.5	215.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000214289	ENSMUSP00000150025	TRANSLATION	protein_coding	stop	-	5	663	0	4.13	0	170.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000190617	ENSMUSP00000139871	TRANSLATION	protein_coding	-	CCDS21114.1	1	868	0	4.85	0.5	215.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030577	Cd22	ENSMUST00000188157	ENSMUSP00000140450	TRANSLATION	protein_coding	stop	-	3	147	0	1.02	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030577	Cd22	ENSMUST00000186354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030577	Cd22	ENSMUST00000187436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060747	Ifnl3	ENSMUST00000078364	ENSMUSP00000077473	TRANSLATION	protein_coding	-	CCDS21047.1	1	193	0	4.35	0.5	231.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000046792	Zfp787	ENSMUST00000094870	ENSMUSP00000092468	TRANSLATION	protein_coding	-	CCDS20769.1	1	381	27	1.4	6.3	151.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000046792	Zfp787	ENSMUST00000208746	ENSMUSP00000146871	TRANSLATION	protein_coding	-	-	2	30	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046792	Zfp787	ENSMUST00000207331	ENSMUSP00000146951	TRANSLATION	protein_coding	-	-	1	30	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046792	Zfp787	ENSMUST00000207957	ENSMUSP00000146901	TRANSLATION	protein_coding	-	-	5	69	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046792	Zfp787	ENSMUST00000207628	ENSMUSP00000147044	TRANSLATION	protein_coding	-	-	1	30	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046792	Zfp787	ENSMUST00000207315	ENSMUSP00000147060	TRANSLATION	protein_coding	stop	-	3	98	4	0.8	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046792	Zfp787	ENSMUST00000208894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045362	Tnfrsf26	ENSMUST00000055723	ENSMUSP00000054938	TRANSLATION	protein_coding	-	CCDS40199.1	1	204	0	3.6	0.5	71.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000045362	Tnfrsf26	ENSMUST00000208124	ENSMUSP00000146662	TRANSLATION	protein_coding	-	-	1	66	0	0.4	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000062553	Olfr709-ps1	ENSMUST00000215468	ENSMUSP00000150392	TRANSLATION	protein_coding	-	-	5	307	0	0.42	5.1	194.5	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000062553	Olfr709-ps1	ENSMUST00000072368	ENSMUSP00000072205	TRANSLATION	protein_coding	-	-	-	307	0	0.42	5.1	194.5	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039608	Olfr303	ENSMUST00000215733	ENSMUSP00000148852	TRANSLATION	protein_coding	-	CCDS21429.1	5	319	0	0.2	5.1	177.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039608	Olfr303	ENSMUST00000053958	ENSMUSP00000062459	TRANSLATION	protein_coding	-	CCDS21429.1	-	319	0	0.2	5.1	177.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039608	Olfr303	ENSMUST00000215532	ENSMUSP00000150700	TRANSLATION	protein_coding	-	CCDS21429.1	5	319	0	0.2	5.1	177.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039608	Olfr303	ENSMUST00000216409	ENSMUSP00000149419	TRANSLATION	protein_coding	-	CCDS21429.1	5	319	0	0.2	5.1	177.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039608	Olfr303	ENSMUST00000215234	ENSMUSP00000148990	TRANSLATION	nonsense_mediated_decay	-	-	5	319	0	0.2	5.1	177.5	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000030393	Zik1	ENSMUST00000032551	ENSMUSP00000032551	TRANSLATION	protein_coding	-	CCDS20792.1	1	463	36	0.6	0.5	261.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000052303	Mrgpra6	ENSMUST00000073793	ENSMUSP00000073463	TRANSLATION	protein_coding	-	-	1	301	0	1.284	0	48.6	7	-2,-5	-	-	11.682	PRINCIPAL:1
ENSMUSG00000052303	Mrgpra6	ENSMUST00000186456	ENSMUSP00000140353	TRANSLATION	protein_coding	-	-	5	271	0	0.42	0	51.3	6	-4,-7	-	-	7.962	MINOR
ENSMUSG00000042675	Ypel3	ENSMUST00000106356	ENSMUSP00000101963	TRANSLATION	protein_coding	-	CCDS21842.1	5	119	4	0	19.5	49.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042675	Ypel3	ENSMUST00000145762	ENSMUSP00000115596	TRANSLATION	protein_coding	stop	-	3	103	4	0	0	39.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042675	Ypel3	ENSMUST00000106359	ENSMUSP00000101966	TRANSLATION	protein_coding	-	-	5	83	2	0	0	0	0	-4,-7	-	-	2	MINOR
ENSMUSG00000042675	Ypel3	ENSMUST00000170882	ENSMUSP00000128753	TRANSLATION	protein_coding	-	CCDS21842.1	3	119	4	0	19.5	49.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042675	Ypel3	ENSMUST00000150760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042675	Ypel3	ENSMUST00000132643	ENSMUSP00000115272	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042675	Ypel3	ENSMUST00000106357	ENSMUSP00000101964	TRANSLATION	protein_coding	-	CCDS21842.1	1	119	4	0	19.5	49.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042675	Ypel3	ENSMUST00000038614	ENSMUSP00000037332	TRANSLATION	protein_coding	-	CCDS21842.1	1	119	4	0	19.5	49.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042675	Ypel3	ENSMUST00000156891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042675	Ypel3	ENSMUST00000143078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042675	Ypel3	ENSMUST00000206143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004056	Akt2	ENSMUST00000136962	ENSMUSP00000117682	TRANSLATION	protein_coding	stop	-	5	229	18	6.54	0	117.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000108344	ENSMUSP00000103981	TRANSLATION	protein_coding	-	CCDS21027.1	1	481	28	12.37	14	361	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000004056	Akt2	ENSMUST00000138459	ENSMUSP00000123204	TRANSLATION	protein_coding	stop	-	5	67	8	1.83	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000147263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004056	Akt2	ENSMUST00000142365	ENSMUSP00000120978	TRANSLATION	protein_coding	stop	-	3	84	8	2.33	0	42	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000143347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004056	Akt2	ENSMUST00000108342	ENSMUSP00000103979	TRANSLATION	protein_coding	stop	-	3	222	18	6.37	0	118.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000136981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004056	Akt2	ENSMUST00000167435	ENSMUSP00000132141	TRANSLATION	protein_coding	-	CCDS21027.1	1	481	28	12.37	14	361	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000004056	Akt2	ENSMUST00000143499	ENSMUSP00000117119	TRANSLATION	protein_coding	stop	-	3	63	1	1.99	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000051356	ENSMUSP00000052103	TRANSLATION	protein_coding	-	CCDS21027.1	1	481	28	12.37	14	361	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000004056	Akt2	ENSMUST00000108343	ENSMUSP00000103980	TRANSLATION	protein_coding	-	CCDS21027.1	5	481	28	12.37	14	361	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000004056	Akt2	ENSMUST00000128540	ENSMUSP00000122716	TRANSLATION	protein_coding	stop	-	5	98	9	2.66	0	51.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004056	Akt2	ENSMUST00000085917	ENSMUSP00000083081	TRANSLATION	protein_coding	-	-	5	438	24	11.37	2.4	276.1	0	-4,-6	-	-	8.676	MINOR
ENSMUSG00000033510	Otud7a	ENSMUST00000177534	ENSMUSP00000135559	TRANSLATION	protein_coding	stop	-	5	685	0	10.13	0	85.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033510	Otud7a	ENSMUST00000058476	ENSMUSP00000057282	TRANSLATION	protein_coding	-	CCDS21330.1	1	926	0	9.8	0.5	109.8	0	-4,-7	-	-	11.34	PRINCIPAL:1
ENSMUSG00000033510	Otud7a	ENSMUST00000176734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033510	Otud7a	ENSMUST00000177511	ENSMUSP00000134821	TRANSLATION	protein_coding	start	-	3	89	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095758	Vmn1r128	ENSMUST00000169165	ENSMUSP00000129433	TRANSLATION	protein_coding	-	CCDS52096.1	-	307	0	0	1.5	53.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030519	Apba2	ENSMUST00000206246	ENSMUSP00000146038	TRANSLATION	protein_coding	-	-	5	738	0	8	0.5	262.8	0	-4,-2	-	-	10.362	MINOR
ENSMUSG00000030519	Apba2	ENSMUST00000032732	ENSMUSP00000032732	TRANSLATION	protein_coding	-	CCDS21335.1	1	750	0	8.5	1.5	273.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030519	Apba2	ENSMUST00000206061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030519	Apba2	ENSMUST00000205551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030519	Apba2	ENSMUST00000205604	ENSMUSP00000146279	TRANSLATION	protein_coding	stop	-	2	102	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030519	Apba2	ENSMUST00000205613	ENSMUSP00000146269	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030519	Apba2	ENSMUST00000206630	ENSMUSP00000146108	TRANSLATION	protein_coding	start	-	3	79	0	2.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000206995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042289	Hsd3b7	ENSMUST00000132702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042289	Hsd3b7	ENSMUST00000125188	ENSMUSP00000145613	TRANSLATION	protein_coding	stop	-	2	119	24	2.445	0	123.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000124631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042289	Hsd3b7	ENSMUST00000046863	ENSMUSP00000036245	TRANSLATION	protein_coding	-	CCDS40145.1	1	369	36	5.275	7.5	324.3	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000042289	Hsd3b7	ENSMUST00000138432	ENSMUSP00000114536	TRANSLATION	protein_coding	stop	-	5	77	15	0.855	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000144748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042289	Hsd3b7	ENSMUST00000155005	ENSMUSP00000145804	TRANSLATION	nonsense_mediated_decay	-	-	3	70	15	1.255	0	40.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000206674	ENSMUSP00000146308	TRANSLATION	protein_coding	stop	-	3	141	15	1.255	0	37.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000139068	ENSMUSP00000121246	TRANSLATION	protein_coding	stop	-	3	100	18	2.055	0	96	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000136597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042289	Hsd3b7	ENSMUST00000106272	ENSMUSP00000101879	TRANSLATION	protein_coding	-	-	5	338	30	4.855	2.2	202.2	1	-4,-7	-	-	7.713	MINOR
ENSMUSG00000042289	Hsd3b7	ENSMUST00000106271	ENSMUSP00000101878	TRANSLATION	protein_coding	-	-	5	221	33	3.775	0	203.4	0	-4,-7	-	-	7.002	MINOR
ENSMUSG00000073949	Olfr606	ENSMUST00000214631	ENSMUSP00000149577	TRANSLATION	protein_coding	-	CCDS21574.1	5	319	0	0.2	5.2	384.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073949	Olfr606	ENSMUST00000098200	ENSMUSP00000095802	TRANSLATION	protein_coding	-	CCDS21574.1	-	319	0	0.2	5.2	384.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073949	Olfr606	ENSMUST00000217250	ENSMUSP00000151177	TRANSLATION	protein_coding	-	CCDS21574.1	5	319	0	0.2	5.2	384.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000070837	Aurkc	ENSMUST00000086248	ENSMUSP00000083426	TRANSLATION	protein_coding	-	CCDS39754.1	1	315	21	5.83	0.5	245.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000070837	Aurkc	ENSMUST00000208049	ENSMUSP00000147207	TRANSLATION	protein_coding	-	CCDS85211.1	1	276	21	5.83	0.5	245.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000070837	Aurkc	ENSMUST00000208518	ENSMUSP00000146898	TRANSLATION	protein_coding	stop	-	3	146	20	3.08	0	131.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070837	Aurkc	ENSMUST00000207711	ENSMUSP00000146450	TRANSLATION	protein_coding	-	CCDS85211.1	1	276	21	5.83	0.5	245.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000070837	Aurkc	ENSMUST00000207660	ENSMUSP00000147055	TRANSLATION	protein_coding	start	-	5	184	5	3.998	0	153	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054169	Ceacam10	ENSMUST00000038069	ENSMUSP00000037036	TRANSLATION	protein_coding	-	CCDS39833.1	1	265	0	3.24	0.5	73.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000054169	Ceacam10	ENSMUST00000206847	ENSMUSP00000146217	TRANSLATION	protein_coding	-	-	2	145	0	1.24	0.5	41.5	0	1,-2	-	-	5.37	MINOR
ENSMUSG00000054169	Ceacam10	ENSMUST00000206380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054169	Ceacam10	ENSMUST00000206850	ENSMUSP00000146284	TRANSLATION	nonsense_mediated_decay	start	-	5	82	0	1	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000003444	Med29	ENSMUST00000003536	ENSMUSP00000003536	TRANSLATION	protein_coding	-	CCDS21042.1	1	199	0	0	0.5	180.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038570	Saxo2	ENSMUST00000056728	ENSMUSP00000057993	TRANSLATION	protein_coding	-	CCDS21409.1	1	394	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038570	Saxo2	ENSMUST00000151632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038570	Saxo2	ENSMUST00000126478	ENSMUSP00000146351	TRANSLATION	protein_coding	-	-	1	83	0	0	0	0	0	-3,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000038570	Saxo2	ENSMUST00000156720	ENSMUSP00000159041	TRANSLATION	protein_coding	-	-	1	73	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000038570	Saxo2	ENSMUST00000207693	ENSMUSP00000147203	TRANSLATION	protein_coding	-	-	1	74	0	0	0	0	0	-2,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000110221	Gm36210	ENSMUST00000210663	ENSMUSP00000147734	TRANSLATION	protein_coding	-	-	5	229	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038502	Ptov1	ENSMUST00000207363	ENSMUSP00000146633	TRANSLATION	protein_coding	start/stop	-	5	136	0	3.78	0	159.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038502	Ptov1	ENSMUST00000208687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000207393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000208991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000207416	ENSMUSP00000147048	TRANSLATION	nonsense_mediated_decay	start	-	2	158	0	4.21	0	180.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038502	Ptov1	ENSMUST00000207303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000209018	ENSMUSP00000146761	TRANSLATION	protein_coding	start/stop	-	5	73	0	2.08	0	42.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038502	Ptov1	ENSMUST00000208410	ENSMUSP00000147094	TRANSLATION	protein_coding	start/stop	-	5	132	0	3.71	0	100.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038502	Ptov1	ENSMUST00000208655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000208682	ENSMUSP00000146587	TRANSLATION	protein_coding	start	-	5	247	0	3.06	0	108	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038502	Ptov1	ENSMUST00000208765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000209003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038502	Ptov1	ENSMUST00000046575	ENSMUSP00000035281	TRANSLATION	protein_coding	-	CCDS21219.1	1	416	0	8.77	7.5	366.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000038502	Ptov1	ENSMUST00000209139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003378	Grik5	ENSMUST00000003468	ENSMUSP00000003468	TRANSLATION	protein_coding	-	CCDS20970.1	1	979	0	17.28	6.3	498.2	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000003378	Grik5	ENSMUST00000206095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003378	Grik5	ENSMUST00000205661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003378	Grik5	ENSMUST00000206134	ENSMUSP00000146227	TRANSLATION	nonsense_mediated_decay	-	-	5	270	0	4.78	0	77.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000003378	Grik5	ENSMUST00000206132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003378	Grik5	ENSMUST00000205328	ENSMUSP00000146079	TRANSLATION	nonsense_mediated_decay	-	-	1	130	0	1.45	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000003378	Grik5	ENSMUST00000205993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030433	Sbk2	ENSMUST00000182214	ENSMUSP00000138504	TRANSLATION	protein_coding	-	CCDS51980.1	5	362	5	2.32	1.5	134.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000030433	Sbk2	ENSMUST00000182837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030433	Sbk2	ENSMUST00000208109	ENSMUSP00000146819	TRANSLATION	protein_coding	-	-	5	189	1	1.2	0	33.3	0	-4,-5	-	-	4.102	MINOR
ENSMUSG00000030433	Sbk2	ENSMUST00000032598	ENSMUSP00000032598	TRANSLATION	protein_coding	-	CCDS51980.1	3	362	5	2.32	1.5	134.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000030433	Sbk2	ENSMUST00000183170	ENSMUSP00000138187	TRANSLATION	protein_coding	stop	-	3	216	5	1.9	0	97.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054555	Adam12	ENSMUST00000154144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054555	Adam12	ENSMUST00000206313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054555	Adam12	ENSMUST00000206426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054555	Adam12	ENSMUST00000138363	ENSMUSP00000114874	TRANSLATION	protein_coding	start	-	1	581	21	6.632	0	269.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000054555	Adam12	ENSMUST00000127524	ENSMUSP00000120094	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054555	Adam12	ENSMUST00000134504	ENSMUSP00000123161	TRANSLATION	protein_coding	stop	-	5	189	1	0.5	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054555	Adam12	ENSMUST00000067680	ENSMUSP00000065213	TRANSLATION	protein_coding	-	CCDS21938.1	1	903	25	9.5	0.5	533	1	1,1	-	-	18	PRINCIPAL:1
ENSMUSG00000094532	Vmn1r259	ENSMUST00000168926	ENSMUSP00000131872	TRANSLATION	protein_coding	-	CCDS52123.1	-	305	0	0	1.5	56.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000003868	Ruvbl2	ENSMUST00000211214	ENSMUSP00000147502	TRANSLATION	protein_coding	-	CCDS21243.1	1	463	21	13.57	15	612.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000003868	Ruvbl2	ENSMUST00000211440	ENSMUSP00000148205	TRANSLATION	nonsense_mediated_decay	start	-	5	134	16	3.5	0	182.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003868	Ruvbl2	ENSMUST00000209426	ENSMUSP00000147423	TRANSLATION	protein_coding	start	-	3	104	4	3.16	0	99.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003868	Ruvbl2	ENSMUST00000107771	ENSMUSP00000103400	TRANSLATION	protein_coding	-	CCDS21243.1	1	463	21	13.57	15	612.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000003868	Ruvbl2	ENSMUST00000211478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003868	Ruvbl2	ENSMUST00000210271	ENSMUSP00000147650	TRANSLATION	protein_coding	start	-	3	48	2	1.264	0	25	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003868	Ruvbl2	ENSMUST00000211666	ENSMUSP00000148040	TRANSLATION	protein_coding	stop	-	3	221	16	6.33	0	284.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003868	Ruvbl2	ENSMUST00000210439	ENSMUSP00000147688	TRANSLATION	protein_coding	stop	-	5	237	14	6.58	0	278.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030704	Rab6a	ENSMUST00000107048	ENSMUSP00000102663	TRANSLATION	protein_coding	-	-	3	175	14	5.33	9.9	164.8	0	-4,-5	-	-	11.098	MINOR
ENSMUSG00000030704	Rab6a	ENSMUST00000032946	ENSMUSP00000032946	TRANSLATION	protein_coding	-	CCDS21503.1	1	208	21	6.41	19.5	197.9	0	-4,-7	-	-	21.988	PRINCIPAL:3
ENSMUSG00000030704	Rab6a	ENSMUST00000098252	ENSMUSP00000095852	TRANSLATION	protein_coding	-	CCDS52323.1	1	208	21	6.41	19.5	198.1	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000030704	Rab6a	ENSMUST00000123960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097075	Cdiptos	ENSMUST00000180704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097075	Cdiptos	ENSMUST00000205437	ENSMUSP00000148631	TRANSLATION	protein_coding	-	-	5	117	0	0	1	0	0	-4,-7	-	-	0	PRINCIPAL:5
ENSMUSG00000097075	Cdiptos	ENSMUST00000205903	ENSMUSP00000148580	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000097075	Cdiptos	ENSMUST00000206816	ENSMUSP00000148423	TRANSLATION	nonsense_mediated_decay	-	-	2	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000097075	Cdiptos	ENSMUST00000206296	ENSMUSP00000148275	TRANSLATION	protein_coding	-	-	5	101	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000097075	Cdiptos	ENSMUST00000181859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097075	Cdiptos	ENSMUST00000206667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033904	Ccp110	ENSMUST00000123178	ENSMUSP00000147070	TRANSLATION	protein_coding	start	-	1	796	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033904	Ccp110	ENSMUST00000149056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033904	Ccp110	ENSMUST00000038650	ENSMUSP00000038881	TRANSLATION	protein_coding	-	CCDS21775.1	5	1004	0	0	0.5	64.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033904	Ccp110	ENSMUST00000106557	ENSMUSP00000102167	TRANSLATION	protein_coding	-	CCDS21775.1	1	1004	0	0	0.5	64.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033904	Ccp110	ENSMUST00000208766	ENSMUSP00000146903	TRANSLATION	protein_coding	start	-	3	184	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033904	Ccp110	ENSMUST00000140831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030613	Ccdc90b	ENSMUST00000153776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030613	Ccdc90b	ENSMUST00000032842	ENSMUSP00000032842	TRANSLATION	protein_coding	-	CCDS21449.1	1	256	0	0	5.1	199.8	1	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000030613	Ccdc90b	ENSMUST00000085017	ENSMUSP00000082090	TRANSLATION	protein_coding	-	CCDS52309.1	1	222	0	0	1.7	97.7	1	-4,0	-	-	0.342	MINOR
ENSMUSG00000078606	Gm4070	ENSMUST00000176467	ENSMUSP00000135898	TRANSLATION	protein_coding	-	CCDS57577.1	1	2427	16	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078606	Gm4070	ENSMUST00000176969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078606	Gm4070	ENSMUST00000176994	ENSMUSP00000135667	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078606	Gm4070	ENSMUST00000106766	ENSMUSP00000102377	TRANSLATION	protein_coding	-	CCDS57577.1	1	2427	16	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064254	Ethe1	ENSMUST00000077191	ENSMUSP00000076433	TRANSLATION	protein_coding	-	CCDS20957.1	1	254	7	5.95	6.3	59.5	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000040824	Snrpd2	ENSMUST00000049294	ENSMUSP00000037597	TRANSLATION	protein_coding	-	CCDS20892.1	1	118	5	2	17.5	67.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040824	Snrpd2	ENSMUST00000206766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073897	Olfr17	ENSMUST00000210568	ENSMUSP00000147931	TRANSLATION	protein_coding	-	CCDS57578.1	5	315	0	0.42	6.4	196.1	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073897	Olfr17	ENSMUST00000098138	ENSMUSP00000095741	TRANSLATION	protein_coding	-	CCDS57578.1	-	315	0	0.42	6.4	196.1	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023185	Ceacam14	ENSMUST00000023953	ENSMUSP00000023953	TRANSLATION	protein_coding	-	CCDS20864.1	1	263	0	1.12	0.5	0	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094612	Olfr491	ENSMUST00000214605	ENSMUSP00000150694	TRANSLATION	protein_coding	-	CCDS21711.1	2	310	0	0.2	3.9	166.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094612	Olfr491	ENSMUST00000053179	ENSMUSP00000061188	TRANSLATION	protein_coding	-	CCDS21711.1	-	310	0	0.2	3.9	166.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094612	Olfr491	ENSMUST00000209545	ENSMUSP00000148094	TRANSLATION	protein_coding	-	CCDS21711.1	5	310	0	0.2	3.9	166.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000048528	Nkx1-2	ENSMUST00000054562	ENSMUSP00000052778	TRANSLATION	protein_coding	-	CCDS21924.1	1	305	0	0.4	1.5	74	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000030682	Cdipt	ENSMUST00000206794	ENSMUSP00000145918	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	1.18	0	50.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030682	Cdipt	ENSMUST00000206780	ENSMUSP00000145841	TRANSLATION	protein_coding	stop	-	5	100	0	0.4	0	0	2	-1,-3	-	-	-1	MINOR
ENSMUSG00000030682	Cdipt	ENSMUST00000206964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030682	Cdipt	ENSMUST00000206346	ENSMUSP00000146137	TRANSLATION	protein_coding	-	CCDS85418.1	1	170	0	1.18	0.5	50.8	1	-4,-7	-	-	12	MINOR
ENSMUSG00000030682	Cdipt	ENSMUST00000206170	ENSMUSP00000145579	TRANSLATION	nonsense_mediated_decay	-	-	5	169	0	1.18	0	50.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000030682	Cdipt	ENSMUST00000206450	ENSMUSP00000146256	TRANSLATION	protein_coding	-	-	5	226	0	1.18	0	50.8	1	-4,-7	-	-	12	MINOR
ENSMUSG00000030682	Cdipt	ENSMUST00000032920	ENSMUSP00000032920	TRANSLATION	protein_coding	-	CCDS21853.1	1	213	0	1.18	8.8	50.8	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030682	Cdipt	ENSMUST00000205830	ENSMUSP00000145787	TRANSLATION	protein_coding	-	-	2	185	0	0.88	0	34.5	3	-2,-3	-	-	8.55	MINOR
ENSMUSG00000052889	Prkcb	ENSMUST00000206495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052889	Prkcb	ENSMUST00000131167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052889	Prkcb	ENSMUST00000205550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052889	Prkcb	ENSMUST00000064921	ENSMUSP00000064812	TRANSLATION	protein_coding	-	CCDS85402.1	1	671	33	15.58	11.8	455.1	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000052889	Prkcb	ENSMUST00000127910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052889	Prkcb	ENSMUST00000064989	ENSMUSP00000070019	TRANSLATION	protein_coding	-	CCDS21815.1	1	673	33	15.58	11.8	440	0	-4,-5	-	-	20.094	PRINCIPAL:3
ENSMUSG00000052889	Prkcb	ENSMUST00000149583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052889	Prkcb	ENSMUST00000143692	ENSMUSP00000138788	TRANSLATION	nonsense_mediated_decay	-	-	5	673	33	15.58	11.8	440	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041775	Mapk1ip1	ENSMUST00000119664	ENSMUSP00000112631	TRANSLATION	protein_coding	-	CCDS21949.1	1	263	0	0	1.5	165	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041775	Mapk1ip1	ENSMUST00000075667	ENSMUSP00000075090	TRANSLATION	protein_coding	-	CCDS21949.1	1	263	0	0	1.5	165	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041775	Mapk1ip1	ENSMUST00000118810	ENSMUSP00000113813	TRANSLATION	protein_coding	-	CCDS21949.1	1	263	0	0	1.5	165	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000054381	Zfp747	ENSMUST00000205832	ENSMUSP00000145805	TRANSLATION	protein_coding	-	-	3	89	0	0	0	27.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000054381	Zfp747	ENSMUST00000067425	ENSMUSP00000070685	TRANSLATION	protein_coding	-	CCDS40142.1	1	422	36	0.6	0.5	260.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000054381	Zfp747	ENSMUST00000206942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057513	Vmn1r177	ENSMUST00000073967	ENSMUSP00000073621	TRANSLATION	protein_coding	-	CCDS20934.1	-	309	0	0	0.5	46.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073838	Tufm	ENSMUST00000098048	ENSMUSP00000095656	TRANSLATION	protein_coding	-	CCDS21830.1	1	452	14	10.16	7.5	319.5	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000073838	Tufm	ENSMUST00000205346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073838	Tufm	ENSMUST00000205478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073838	Tufm	ENSMUST00000206055	ENSMUSP00000145664	TRANSLATION	protein_coding	start/stop	-	5	118	5	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073838	Tufm	ENSMUST00000106392	ENSMUSP00000102000	TRANSLATION	protein_coding	-	CCDS52398.1	2	435	14	8.07	0.5	239.2	0	-4,0	-	-	9	MINOR
ENSMUSG00000073838	Tufm	ENSMUST00000206572	ENSMUSP00000145924	TRANSLATION	protein_coding	start	-	2	116	0	2.75	0	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032725	Folr2	ENSMUST00000209329	ENSMUSP00000148085	TRANSLATION	protein_coding	stop	-	3	177	16	4.35	0	174.8	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032725	Folr2	ENSMUST00000094141	ENSMUSP00000091692	TRANSLATION	protein_coding	-	CCDS21516.1	1	251	19	5.35	1.5	205.4	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032725	Folr2	ENSMUST00000211604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032725	Folr2	ENSMUST00000211566	ENSMUSP00000147283	TRANSLATION	protein_coding	stop	-	3	87	0	1.585	0	39.9	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032725	Folr2	ENSMUST00000210598	ENSMUSP00000147920	TRANSLATION	protein_coding	-	CCDS21516.1	1	251	19	5.35	1.5	205.4	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000096373	Vmn2r31	ENSMUST00000075108	ENSMUSP00000074613	TRANSLATION	protein_coding	-	CCDS51995.1	5	861	0	2.8	0.5	392.6	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000073963	Olfr572	ENSMUST00000215782	ENSMUSP00000149174	TRANSLATION	protein_coding	-	CCDS21553.1	5	318	0	0.2	6.4	395.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073963	Olfr572	ENSMUST00000214096	ENSMUSP00000150579	TRANSLATION	protein_coding	-	CCDS21553.1	5	318	0	0.2	6.4	395.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073963	Olfr572	ENSMUST00000098214	ENSMUSP00000095816	TRANSLATION	protein_coding	-	CCDS21553.1	-	318	0	0.2	6.4	395.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000045252	Zfp574	ENSMUST00000206733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045252	Zfp574	ENSMUST00000053410	ENSMUSP00000057817	TRANSLATION	protein_coding	-	CCDS20971.1	1	900	76	0	1.5	197.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045252	Zfp574	ENSMUST00000179556	ENSMUSP00000136547	TRANSLATION	protein_coding	-	CCDS20971.1	1	900	76	0	1.5	197.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045252	Zfp574	ENSMUST00000206530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043948	Olfr691	ENSMUST00000057528	ENSMUSP00000061078	TRANSLATION	protein_coding	-	CCDS21647.1	-	322	0	0.36	7.6	374.6	6	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000043948	Olfr691	ENSMUST00000213290	ENSMUSP00000150297	TRANSLATION	protein_coding	-	CCDS21647.1	5	322	0	0.36	7.6	374.6	6	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000066242	Olfr467	ENSMUST00000084756	ENSMUSP00000081811	TRANSLATION	protein_coding	start	-	-	308	0	0.36	0.5	175.4	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000066242	Olfr467	ENSMUST00000208563	ENSMUSP00000147125	TRANSLATION	protein_coding	-	CCDS85374.1	5	306	0	0.36	0.5	175.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066242	Olfr467	ENSMUST00000214253	ENSMUSP00000149295	TRANSLATION	protein_coding	-	CCDS85374.1	5	306	0	0.36	0.5	175.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031075	Ano1	ENSMUST00000155175	ENSMUSP00000120306	TRANSLATION	protein_coding	stop	-	5	290	0	0	0	188	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031075	Ano1	ENSMUST00000152531	ENSMUSP00000119653	TRANSLATION	protein_coding	start/stop	-	5	335	0	0.65	0	344.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000031075	Ano1	ENSMUST00000118556	ENSMUSP00000113899	TRANSLATION	protein_coding	-	CCDS57600.1	1	1014	0	3.27	1.5	806.8	9	-4,-5	-	-	11.73	ALTERNATIVE:2
ENSMUSG00000031075	Ano1	ENSMUST00000238848	ENSMUSP00000159034	TRANSLATION	protein_coding	-	-	-	1040	0	3.405	1	799.9	9	-4,-5	-	-	11.586	ALTERNATIVE:2
ENSMUSG00000031075	Ano1	ENSMUST00000033393	ENSMUSP00000033393	TRANSLATION	protein_coding	-	-	5	956	0	3.27	0	806.8	9	-4,-5	-	-	11.73	ALTERNATIVE:2
ENSMUSG00000031075	Ano1	ENSMUST00000121758	ENSMUSP00000112616	TRANSLATION	protein_coding	-	CCDS40202.2	1	1017	0	3.27	1.5	804.7	9	-4,-5	-	-	11.604	PRINCIPAL:3
ENSMUSG00000031075	Ano1	ENSMUST00000131571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031075	Ano1	ENSMUST00000141632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031075	Ano1	ENSMUST00000131731	ENSMUSP00000118206	TRANSLATION	protein_coding	stop	-	2	230	0	0	0	137.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031075	Ano1	ENSMUST00000208985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031075	Ano1	ENSMUST00000208094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066108	Muc5b	ENSMUST00000165147	ENSMUSP00000128276	TRANSLATION	protein_coding	-	CCDS52448.1	5	4800	0	3.2	0.5	1485.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040148	Hmx3	ENSMUST00000046093	ENSMUSP00000039018	TRANSLATION	protein_coding	-	CCDS21917.1	1	356	0	0.4	5.1	73.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074282	Zfp94	ENSMUST00000108436	ENSMUSP00000104075	TRANSLATION	protein_coding	-	CCDS57524.1	1	486	44	1.6	0.5	308.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074282	Zfp94	ENSMUST00000137781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074282	Zfp94	ENSMUST00000146817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074282	Zfp94	ENSMUST00000126580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074282	Zfp94	ENSMUST00000154309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074282	Zfp94	ENSMUST00000032673	ENSMUSP00000032673	TRANSLATION	protein_coding	-	CCDS20945.1	1	480	44	1.6	0.5	308.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000049600	Zbtb45	ENSMUST00000210282	ENSMUSP00000147298	TRANSLATION	protein_coding	-	CCDS20822.1	1	520	16	2.2	1.5	152.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049600	Zbtb45	ENSMUST00000172240	ENSMUSP00000130439	TRANSLATION	protein_coding	-	CCDS20822.1	1	520	16	2.2	1.5	152.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049600	Zbtb45	ENSMUST00000051390	ENSMUSP00000056086	TRANSLATION	protein_coding	-	CCDS20822.1	1	520	16	2.2	1.5	152.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049600	Zbtb45	ENSMUST00000209997	ENSMUSP00000147653	TRANSLATION	protein_coding	stop	-	3	168	0	1.2	0	76	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049600	Zbtb45	ENSMUST00000210108	ENSMUSP00000147835	TRANSLATION	protein_coding	stop	-	2	27	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013367	Iglon5	ENSMUST00000107974	ENSMUSP00000103608	TRANSLATION	protein_coding	-	CCDS52223.1	1	336	0	4.9	5.1	119	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000013367	Iglon5	ENSMUST00000206336	ENSMUSP00000145830	TRANSLATION	protein_coding	start	-	3	161	0	2.87	0	52	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000110171	Olfr484	ENSMUST00000214722	ENSMUSP00000150774	TRANSLATION	protein_coding	-	CCDS21706.1	5	321	0	0.32	1.5	177	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000110171	Olfr484	ENSMUST00000210881	ENSMUSP00000147263	TRANSLATION	protein_coding	-	CCDS21706.1	-	321	0	0.32	1.5	177	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032637	Atxn2l	ENSMUST00000206577	ENSMUSP00000146023	TRANSLATION	protein_coding	-	-	5	1096	0	0	1.5	159.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000032637	Atxn2l	ENSMUST00000179818	ENSMUSP00000137108	TRANSLATION	protein_coding	stop	-	5	218	0	0	0	72.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032637	Atxn2l	ENSMUST00000206265	ENSMUSP00000145768	TRANSLATION	protein_coding	start	-	5	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032637	Atxn2l	ENSMUST00000166682	ENSMUSP00000125881	TRANSLATION	protein_coding	stop	-	5	863	0	0	0	151.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032637	Atxn2l	ENSMUST00000040202	ENSMUSP00000035415	TRANSLATION	protein_coding	-	CCDS21831.1	1	1049	0	0	1.5	159.7	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000032637	Atxn2l	ENSMUST00000167759	ENSMUSP00000132959	TRANSLATION	protein_coding	-	CCDS85413.1	1	994	0	0	0.5	159.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000092335	Zfp977	ENSMUST00000173283	ENSMUSP00000134517	TRANSLATION	protein_coding	-	-	2	438	44	2.35	0.5	296.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018995	Nars2	ENSMUST00000206109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018995	Nars2	ENSMUST00000149204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018995	Nars2	ENSMUST00000122835	ENSMUSP00000146034	TRANSLATION	nonsense_mediated_decay	start	-	3	79	4	1.2	0	45.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018995	Nars2	ENSMUST00000107159	ENSMUSP00000102777	TRANSLATION	protein_coding	-	-	5	391	9	7.622	1	276.2	0	-3,1	-	-	4.002	MINOR
ENSMUSG00000018995	Nars2	ENSMUST00000044466	ENSMUSP00000044937	TRANSLATION	protein_coding	-	CCDS21454.1	1	477	14	9.952	6.5	389.8	0	-3,1	-	-	20	PRINCIPAL:1
ENSMUSG00000018995	Nars2	ENSMUST00000150681	ENSMUSP00000146169	TRANSLATION	nonsense_mediated_decay	-	-	5	53	3	1.495	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064109	Hcst	ENSMUST00000207504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064109	Hcst	ENSMUST00000208740	ENSMUSP00000146793	TRANSLATION	protein_coding	-	-	1	71	0	0	0	126.8	1	-1,-4	-	-	4.062	MINOR
ENSMUSG00000064109	Hcst	ENSMUST00000075062	ENSMUSP00000074573	TRANSLATION	protein_coding	-	CCDS39882.1	1	79	0	0	3.9	159.1	1	2,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000070709	Zfp974	ENSMUST00000129341	ENSMUSP00000115940	TRANSLATION	protein_coding	stop	-	1	175	0	1	0	84	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070709	Zfp974	ENSMUST00000152330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070709	Zfp974	ENSMUST00000137668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070709	Zfp974	ENSMUST00000145674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070709	Zfp974	ENSMUST00000098639	ENSMUSP00000096238	TRANSLATION	protein_coding	-	CCDS21032.1	1	752	87	0.2	0.5	367	0	-4,-5	-	-	13.2	PRINCIPAL:1
ENSMUSG00000070709	Zfp974	ENSMUST00000138583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047767	Atg16l2	ENSMUST00000146445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000151297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000131988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000153327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000207740	ENSMUSP00000146933	TRANSLATION	nonsense_mediated_decay	start	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047767	Atg16l2	ENSMUST00000120267	ENSMUSP00000112500	TRANSLATION	protein_coding	-	CCDS52329.1	1	623	0	8.769	1.5	167.7	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000047767	Atg16l2	ENSMUST00000209093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000122116	ENSMUSP00000113320	TRANSLATION	protein_coding	-	-	1	602	0	8.619	0	167.7	0	-4,-6	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000047767	Atg16l2	ENSMUST00000207121	ENSMUSP00000146572	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047767	Atg16l2	ENSMUST00000140059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047767	Atg16l2	ENSMUST00000123835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000123970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000143630	ENSMUSP00000117029	TRANSLATION	nonsense_mediated_decay	-	-	5	403	0	3.741	0	152.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047767	Atg16l2	ENSMUST00000134531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000140553	ENSMUSP00000116414	TRANSLATION	nonsense_mediated_decay	-	-	3	81	0	1.44	0	46.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047767	Atg16l2	ENSMUST00000124617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047767	Atg16l2	ENSMUST00000139609	ENSMUSP00000117387	TRANSLATION	nonsense_mediated_decay	-	-	5	403	0	3.741	0	152.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090949	Vmn2r77	ENSMUST00000232688	ENSMUSP00000156969	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000090949	Vmn2r77	ENSMUST00000233167	ENSMUSP00000156425	TRANSLATION	nonsense_mediated_decay	-	-	-	75	0	0	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000090949	Vmn2r77	ENSMUST00000164996	ENSMUSP00000129540	TRANSLATION	protein_coding	-	CCDS52301.1	5	854	4	3.618	0.5	364.3	8	1,-3	-	-	16	PRINCIPAL:2
ENSMUSG00000090949	Vmn2r77	ENSMUST00000233099	ENSMUSP00000156630	TRANSLATION	protein_coding	-	-	-	851	4	3.618	0.5	364.3	8	0,-4	-	-	16	ALTERNATIVE:2
ENSMUSG00000108995	Olfr485	ENSMUST00000208296	ENSMUSP00000147194	TRANSLATION	protein_coding	-	CCDS85375.1	-	317	0	0	0.5	162.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006205	Htra1	ENSMUST00000150717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006205	Htra1	ENSMUST00000150905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006205	Htra1	ENSMUST00000140741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006205	Htra1	ENSMUST00000153290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006205	Htra1	ENSMUST00000006367	ENSMUSP00000006367	TRANSLATION	protein_coding	-	CCDS21908.1	1	480	9	7.83	1.5	226.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030745	Il21r	ENSMUST00000033000	ENSMUSP00000033000	TRANSLATION	protein_coding	-	CCDS21823.1	1	529	6	4.79	0.5	0	0	4,-1	-	-	11.01	PRINCIPAL:2
ENSMUSG00000030745	Il21r	ENSMUST00000206234	ENSMUSP00000145772	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000030745	Il21r	ENSMUST00000206103	ENSMUSP00000145966	TRANSLATION	protein_coding	-	-	1	268	6	5.284	0	0	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000047084	Ngrn	ENSMUST00000117989	ENSMUSP00000113444	TRANSLATION	protein_coding	-	CCDS21393.2	1	293	0	0	1.5	321.5	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000047084	Ngrn	ENSMUST00000138005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030699	Tbx6	ENSMUST00000094037	ENSMUSP00000091579	TRANSLATION	protein_coding	-	CCDS21843.1	1	436	0	3.39	6.3	261.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000030699	Tbx6	ENSMUST00000172352	ENSMUSP00000126418	TRANSLATION	protein_coding	-	-	1	437	0	3.39	0	261.1	0	-4,-6	-	-	12	MINOR
ENSMUSG00000030546	Plin1	ENSMUST00000205413	ENSMUSP00000145747	TRANSLATION	protein_coding	-	-	1	87	0	0	0	111.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030546	Plin1	ENSMUST00000178257	ENSMUSP00000136996	TRANSLATION	protein_coding	-	CCDS21385.1	1	517	0	0	1.5	382.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030546	Plin1	ENSMUST00000205915	ENSMUSP00000146028	TRANSLATION	protein_coding	-	CCDS21385.1	1	517	0	0	1.5	382.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030546	Plin1	ENSMUST00000206083	ENSMUSP00000146003	TRANSLATION	protein_coding	start	-	1	190	0	0	0	191.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030546	Plin1	ENSMUST00000032762	ENSMUSP00000032762	TRANSLATION	protein_coding	-	CCDS21385.1	5	517	0	0	1.5	382.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030546	Plin1	ENSMUST00000205747	ENSMUSP00000146198	TRANSLATION	protein_coding	stop	-	2	161	0	0	0	223.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030546	Plin1	ENSMUST00000205553	ENSMUSP00000145653	TRANSLATION	protein_coding	start	-	3	111	0	0	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095632	Vmn1r175	ENSMUST00000166141	ENSMUSP00000126357	TRANSLATION	protein_coding	-	CCDS52135.1	-	304	0	0	1.5	73.5	4	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095632	Vmn1r175	ENSMUST00000228383	ENSMUSP00000154170	TRANSLATION	protein_coding	-	CCDS52135.1	-	304	0	0	1.5	73.5	4	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030450	Oca2	ENSMUST00000144739	ENSMUSP00000119529	TRANSLATION	nonsense_mediated_decay	-	-	1	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030450	Oca2	ENSMUST00000032633	ENSMUSP00000032633	TRANSLATION	protein_coding	-	CCDS21319.1	1	833	0	2.405	0.5	186.9	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030450	Oca2	ENSMUST00000156886	ENSMUSP00000121798	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030450	Oca2	ENSMUST00000154559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030450	Oca2	ENSMUST00000152693	ENSMUSP00000119099	TRANSLATION	nonsense_mediated_decay	-	-	1	307	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000030450	Oca2	ENSMUST00000155533	ENSMUSP00000145823	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046248	Krtap5-3	ENSMUST00000187512	ENSMUSP00000141116	TRANSLATION	protein_coding	-	CCDS80833.1	-	356	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000046248	Krtap5-3	ENSMUST00000084414	ENSMUSP00000081451	TRANSLATION	protein_coding	-	-	5	196	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000032942	Ucp3	ENSMUST00000128044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032942	Ucp3	ENSMUST00000107059	ENSMUSP00000102674	TRANSLATION	protein_coding	-	CCDS21497.1	5	308	0	5.7	3.9	216.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032942	Ucp3	ENSMUST00000133850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032942	Ucp3	ENSMUST00000032958	ENSMUSP00000032958	TRANSLATION	protein_coding	-	CCDS21497.1	1	308	0	5.7	3.9	216.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000025467	Prap1	ENSMUST00000026540	ENSMUSP00000026540	TRANSLATION	protein_coding	-	CCDS21963.1	1	149	0	0	1.5	46.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091205	Vmn2r71	ENSMUST00000208545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091205	Vmn2r71	ENSMUST00000172338	ENSMUSP00000132337	TRANSLATION	protein_coding	-	CCDS52293.1	5	855	4	2.78	0.5	372	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000091205	Vmn2r71	ENSMUST00000208273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030921	Trim30a	ENSMUST00000076922	ENSMUSP00000076189	TRANSLATION	protein_coding	-	CCDS40068.1	1	496	16	4.528	0.5	106	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030921	Trim30a	ENSMUST00000125762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030921	Trim30a	ENSMUST00000142124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045757	Zfp764	ENSMUST00000139118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045757	Zfp764	ENSMUST00000059199	ENSMUSP00000052944	TRANSLATION	protein_coding	-	CCDS21865.1	1	431	36	0.6	0.5	284.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060791	Gmfg	ENSMUST00000078845	ENSMUSP00000077889	TRANSLATION	protein_coding	-	CCDS39860.1	1	142	0	4.41	21.5	107.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060791	Gmfg	ENSMUST00000138741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060791	Gmfg	ENSMUST00000108289	ENSMUSP00000103924	TRANSLATION	protein_coding	-	CCDS80687.1	3	101	0	3.08	3.9	87.8	0	-4,-5	-	-	8.724	MINOR
ENSMUSG00000060791	Gmfg	ENSMUST00000108292	ENSMUSP00000103927	TRANSLATION	protein_coding	-	CCDS39859.1	1	142	0	4.41	21.5	107.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060791	Gmfg	ENSMUST00000135686	ENSMUSP00000119321	TRANSLATION	protein_coding	stop	-	5	86	0	2.66	0	73.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030611	Mrps11	ENSMUST00000136001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030611	Mrps11	ENSMUST00000133304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030611	Mrps11	ENSMUST00000132922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030611	Mrps11	ENSMUST00000133553	ENSMUSP00000146020	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	1.55	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030611	Mrps11	ENSMUST00000032840	ENSMUSP00000032840	TRANSLATION	protein_coding	-	CCDS21374.1	1	191	0	5.1	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000030611	Mrps11	ENSMUST00000123706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057596	Trim30d	ENSMUST00000141063	ENSMUSP00000115684	TRANSLATION	protein_coding	start/stop	-	3	212	0	2.478	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057596	Trim30d	ENSMUST00000033211	ENSMUSP00000033211	TRANSLATION	protein_coding	-	CCDS40069.1	1	497	16	6.088	0.5	102.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057596	Trim30d	ENSMUST00000071069	ENSMUSP00000065020	TRANSLATION	protein_coding	-	CCDS52347.1	1	347	0	4.758	0.5	31.2	0	-4,-5	-	-	5.082	MINOR
ENSMUSG00000030607	Acan	ENSMUST00000032835	ENSMUSP00000032835	TRANSLATION	protein_coding	-	CCDS21377.1	1	2132	13	2.75	0.5	557.3	0	3,-2	-	-	14.928	PRINCIPAL:1
ENSMUSG00000030607	Acan	ENSMUST00000206779	ENSMUSP00000146292	TRANSLATION	protein_coding	start	-	1	748	17	2.95	0	135.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004540	Psg17	ENSMUST00000004655	ENSMUSP00000004655	TRANSLATION	protein_coding	-	CCDS20878.1	1	475	0	2.8	0.5	146.9	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000074254	Cyp2a4	ENSMUST00000098657	ENSMUSP00000096254	TRANSLATION	protein_coding	-	CCDS21002.1	1	494	31	9	3.9	498.5	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000030523	Trpm1	ENSMUST00000206706	ENSMUSP00000146265	TRANSLATION	protein_coding	-	-	1	426	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000085222	ENSMUSP00000082318	TRANSLATION	protein_coding	-	CCDS21332.2	1	1622	0	2.136	1.5	161.6	9	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000030523	Trpm1	ENSMUST00000206049	ENSMUSP00000145995	TRANSLATION	protein_coding	start	-	1	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000205731	ENSMUSP00000145776	TRANSLATION	protein_coding	-	-	1	443	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000205690	ENSMUSP00000145814	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000206107	ENSMUSP00000146257	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000206314	ENSMUSP00000145593	TRANSLATION	protein_coding	-	-	1	738	0	1.55	0	88.1	3	-4,-2	-	-	5.946	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000205684	ENSMUSP00000146163	TRANSLATION	protein_coding	start/stop	-	1	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000205434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000206740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000205610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000205728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030523	Trpm1	ENSMUST00000206848	ENSMUSP00000146073	TRANSLATION	protein_coding	stop	-	3	153	0	1.55	0	45.9	1	1,-3	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000177102	ENSMUSP00000134947	TRANSLATION	protein_coding	-	CCDS39975.2	1	542	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000206000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000205994	ENSMUSP00000146323	TRANSLATION	protein_coding	start/stop	-	1	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030523	Trpm1	ENSMUST00000205960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000205939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030523	Trpm1	ENSMUST00000206277	ENSMUSP00000146226	TRANSLATION	protein_coding	-	-	5	1628	0	2.136	1	161	9	-4,-2	-	-	11.964	ALTERNATIVE:2
ENSMUSG00000030523	Trpm1	ENSMUST00000206263	ENSMUSP00000146140	TRANSLATION	protein_coding	-	-	5	1506	0	2.136	0	161.6	9	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030523	Trpm1	ENSMUST00000205466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030523	Trpm1	ENSMUST00000206453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030523	Trpm1	ENSMUST00000205348	ENSMUSP00000145708	TRANSLATION	nonsense_mediated_decay	-	-	1	461	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073947	Olfr615	ENSMUST00000098198	ENSMUSP00000095800	TRANSLATION	protein_coding	-	CCDS40057.1	-	313	0	0.36	1.5	350.3	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073947	Olfr615	ENSMUST00000214345	ENSMUSP00000148872	TRANSLATION	protein_coding	-	CCDS40057.1	5	313	0	0.36	1.5	350.3	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073947	Olfr615	ENSMUST00000215673	ENSMUSP00000150166	TRANSLATION	protein_coding	-	CCDS40057.1	5	313	0	0.36	1.5	350.3	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062031	Pgghg	ENSMUST00000164580	ENSMUSP00000128214	TRANSLATION	protein_coding	-	-	5	698	1	5.53	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000062031	Pgghg	ENSMUST00000163094	ENSMUSP00000128478	TRANSLATION	nonsense_mediated_decay	start	-	5	177	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062031	Pgghg	ENSMUST00000169736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062031	Pgghg	ENSMUST00000079403	ENSMUSP00000078372	TRANSLATION	protein_coding	-	CCDS21992.1	1	690	1	5.53	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000062031	Pgghg	ENSMUST00000164337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062031	Pgghg	ENSMUST00000168084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041885	Olfr680-ps1	ENSMUST00000042676	ENSMUSP00000154703	TRANSLATION	protein_coding	-	-	-	311	0	0.48	2.5	236.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044702	Palb2	ENSMUST00000098068	ENSMUSP00000095675	TRANSLATION	protein_coding	-	CCDS40117.1	1	1104	0	7.25	0.5	598.1	0	-4,-5	-	-	11.88	PRINCIPAL:3
ENSMUSG00000044702	Palb2	ENSMUST00000106468	ENSMUSP00000102076	TRANSLATION	protein_coding	-	CCDS80797.1	1	1030	0	5.25	0.5	381.1	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000044702	Palb2	ENSMUST00000205352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044702	Palb2	ENSMUST00000131657	ENSMUSP00000118059	TRANSLATION	nonsense_mediated_decay	start	-	1	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044702	Palb2	ENSMUST00000063587	ENSMUSP00000063514	TRANSLATION	protein_coding	-	CCDS80796.1	1	384	0	7.25	0.5	600.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044702	Palb2	ENSMUST00000154508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044702	Palb2	ENSMUST00000106469	ENSMUSP00000102077	TRANSLATION	protein_coding	-	CCDS72035.1	1	741	0	7.25	0.5	598.1	0	-4,-5	-	-	11.88	ALTERNATIVE:2
ENSMUSG00000044702	Palb2	ENSMUST00000130149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044702	Palb2	ENSMUST00000142952	ENSMUSP00000123041	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048200	Cracr2b	ENSMUST00000167572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048200	Cracr2b	ENSMUST00000172215	ENSMUSP00000132793	TRANSLATION	protein_coding	stop	-	3	157	11	1.2	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048200	Cracr2b	ENSMUST00000171994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048200	Cracr2b	ENSMUST00000165194	ENSMUSP00000131175	TRANSLATION	protein_coding	stop	-	3	17	5	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048200	Cracr2b	ENSMUST00000170879	ENSMUSP00000129946	TRANSLATION	protein_coding	-	-	5	288	11	1.2	0	33.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048200	Cracr2b	ENSMUST00000053670	ENSMUSP00000055899	TRANSLATION	protein_coding	-	CCDS22016.1	1	394	11	1.2	1.5	33.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000048200	Cracr2b	ENSMUST00000163833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048200	Cracr2b	ENSMUST00000116247	ENSMUSP00000132824	TRANSLATION	protein_coding	start	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048200	Cracr2b	ENSMUST00000167491	ENSMUSP00000127957	TRANSLATION	protein_coding	stop	-	3	225	11	1.2	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094001	Vmn1r122	ENSMUST00000164409	ENSMUSP00000131706	TRANSLATION	protein_coding	-	CCDS52090.1	-	305	0	0	1.5	61.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043290	Zfp784	ENSMUST00000062428	ENSMUSP00000051979	TRANSLATION	protein_coding	-	CCDS20755.1	1	297	20	0.48	0.5	76.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050650	Mrgpra1	ENSMUST00000098438	ENSMUSP00000129978	TRANSLATION	protein_coding	-	CCDS21295.2	1	331	0	0.36	1.5	32.2	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040167	Ikzf5	ENSMUST00000121033	ENSMUSP00000113714	TRANSLATION	protein_coding	-	-	1	266	10	0.6	0	0	0	-4,-5	-	-	4.104	MINOR
ENSMUSG00000040167	Ikzf5	ENSMUST00000046306	ENSMUSP00000035583	TRANSLATION	protein_coding	-	CCDS21915.1	1	419	17	1.3	17	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040167	Ikzf5	ENSMUST00000208966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040167	Ikzf5	ENSMUST00000154602	ENSMUSP00000123530	TRANSLATION	protein_coding	stop	-	3	123	6	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040167	Ikzf5	ENSMUST00000142349	ENSMUSP00000117823	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040167	Ikzf5	ENSMUST00000207243	ENSMUSP00000146590	TRANSLATION	protein_coding	stop	-	3	129	4	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040167	Ikzf5	ENSMUST00000128432	ENSMUSP00000139528	TRANSLATION	protein_coding	-	-	3	107	4	0.6	0	0	0	-4,-5	-	-	2.772	MINOR
ENSMUSG00000073974	Olfr551	ENSMUST00000098224	ENSMUSP00000095827	TRANSLATION	protein_coding	-	CCDS21536.1	-	315	0	0	7.6	350.1	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000073974	Olfr551	ENSMUST00000213540	ENSMUSP00000150582	TRANSLATION	protein_coding	-	CCDS21536.1	5	315	0	0	7.6	350.1	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000110040	Gm49369	ENSMUST00000209263	ENSMUSP00000148223	TRANSLATION	protein_coding,RT	start/stop	-	5	273	1	5	0	223	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110040	Gm49369	ENSMUST00000133843	ENSMUSP00000117247	TRANSLATION	protein_coding,RT	start/stop	-	5	278	1	5.91	0	242.8	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000110008	Olfr560	ENSMUST00000210453	ENSMUSP00000148074	TRANSLATION	protein_coding	-	CCDS85366.1	5	314	0	0.36	5.2	396.4	10	-2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000110008	Olfr560	ENSMUST00000239110	ENSMUSP00000158910	TRANSLATION	protein_coding	-	CCDS85366.1	-	314	0	0.36	5.2	396.4	10	-2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000110008	Olfr560	ENSMUST00000232246	ENSMUSP00000156236	TRANSLATION	protein_coding	-	-	-	312	0	0.36	1.2	396.4	10	-1,-2	-	-	12.096	MINOR
ENSMUSG00000030814	Bcl7c	ENSMUST00000106282	ENSMUSP00000101889	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	97	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030814	Bcl7c	ENSMUST00000207019	ENSMUSP00000145706	TRANSLATION	protein_coding	-	-	3	72	0	0	0	97	0	-4,-7	-	-	6	MINOR
ENSMUSG00000030814	Bcl7c	ENSMUST00000153277	ENSMUSP00000145788	TRANSLATION	nonsense_mediated_decay	start	-	3	70	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030814	Bcl7c	ENSMUST00000206200	ENSMUSP00000146168	TRANSLATION	nonsense_mediated_decay	start	-	3	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030814	Bcl7c	ENSMUST00000144103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030814	Bcl7c	ENSMUST00000061468	ENSMUSP00000057937	TRANSLATION	protein_coding	-	CCDS21874.1	1	217	0	0	7.5	97	0	-4,-6	-	-	9	PRINCIPAL:3
ENSMUSG00000030814	Bcl7c	ENSMUST00000205977	ENSMUSP00000145743	TRANSLATION	protein_coding	-	CCDS85422.1	2	241	0	0	6.3	97	0	-4,-6	-	-	8.445	ALTERNATIVE:1
ENSMUSG00000041583	Obox6	ENSMUST00000108513	ENSMUSP00000104153	TRANSLATION	protein_coding	-	CCDS20839.2	3	347	0	0.2	0.5	63.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070424	Art5	ENSMUST00000094128	ENSMUSP00000091678	TRANSLATION	protein_coding	-	CCDS21525.1	2	309	16	1.7	3.9	312.4	0	2,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000070424	Art5	ENSMUST00000106937	ENSMUSP00000102550	TRANSLATION	protein_coding	-	CCDS21525.1	1	309	16	1.7	3.9	312.4	0	2,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000070424	Art5	ENSMUST00000106935	ENSMUSP00000102548	TRANSLATION	protein_coding	-	-	1	164	3	0.8	0.5	115.4	0	2,-1	-	-	2.826	MINOR
ENSMUSG00000070424	Art5	ENSMUST00000106934	ENSMUSP00000102547	TRANSLATION	protein_coding	-	-	5	211	4	1.2	0.5	102.1	0	2,-1	-	-	4.236	MINOR
ENSMUSG00000070424	Art5	ENSMUST00000211553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007946	Phox2a	ENSMUST00000008090	ENSMUSP00000008090	TRANSLATION	protein_coding	-	CCDS21514.1	1	280	0	1	6.3	80.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000007946	Phox2a	ENSMUST00000209878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074004	B3gnt6	ENSMUST00000098278	ENSMUSP00000095879	TRANSLATION	protein_coding	-	CCDS40027.1	1	391	0	0	1.5	158.1	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031015	Swap70	ENSMUST00000210743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031015	Swap70	ENSMUST00000210513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031015	Swap70	ENSMUST00000209261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031015	Swap70	ENSMUST00000033325	ENSMUSP00000033325	TRANSLATION	protein_coding	-	CCDS21744.1	1	585	11	2.4	13	62.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000070797	Psg27	ENSMUST00000094794	ENSMUSP00000092388	TRANSLATION	protein_coding	-	CCDS20873.1	1	474	0	3.16	0.5	145.1	0	-2,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054005	Mill1	ENSMUST00000066780	ENSMUSP00000069083	TRANSLATION	protein_coding	-	CCDS20868.1	1	395	0	2.39	0.5	136.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035298	Klhl35	ENSMUST00000037359	ENSMUSP00000041363	TRANSLATION	protein_coding	-	CCDS52320.1	1	574	0	5.37	1.5	293.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035298	Klhl35	ENSMUST00000152424	ENSMUSP00000120346	TRANSLATION	protein_coding	start	-	3	146	0	1	0	46.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035298	Klhl35	ENSMUST00000153736	ENSMUSP00000117088	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035298	Klhl35	ENSMUST00000142339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078630	Tomt	ENSMUST00000106970	ENSMUSP00000102583	TRANSLATION	protein_coding	-	CCDS40044.1	1	258	14	2.2	11.2	0	0	1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078630	Tomt	ENSMUST00000106969	ENSMUSP00000102582	TRANSLATION	protein_coding	-	CCDS40044.1	1	258	14	2.2	11.2	0	0	1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030827	Fgf21	ENSMUST00000033099	ENSMUSP00000033099	TRANSLATION	protein_coding	-	CCDS21253.1	1	210	0	2.04	1.5	67.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062028	Irgc1	ENSMUST00000205385	ENSMUSP00000146207	TRANSLATION	protein_coding	stop	-	3	82	8	0.8	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062028	Irgc1	ENSMUST00000205776	ENSMUSP00000145975	TRANSLATION	protein_coding	-	CCDS39831.1	1	463	12	1.4	6.3	322	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000062028	Irgc1	ENSMUST00000205629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062028	Irgc1	ENSMUST00000080594	ENSMUSP00000104072	TRANSLATION	protein_coding	-	CCDS39831.1	1	463	12	1.4	6.3	322	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000062028	Irgc1	ENSMUST00000206992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030880	Polr3e	ENSMUST00000209014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030880	Polr3e	ENSMUST00000033173	ENSMUSP00000033173	TRANSLATION	protein_coding	-	CCDS21797.1	1	710	0	2.01	2.7	525.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030880	Polr3e	ENSMUST00000207481	ENSMUSP00000146970	TRANSLATION	protein_coding	-	CCDS52383.1	1	684	0	1.65	0.5	437.9	0	-4,-5	-	-	5.682	MINOR
ENSMUSG00000030880	Polr3e	ENSMUST00000106483	ENSMUSP00000102092	TRANSLATION	protein_coding	-	CCDS21797.1	5	710	0	2.01	2.7	525.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078779	Zfp59	ENSMUST00000205701	ENSMUSP00000145671	TRANSLATION	protein_coding	-	CCDS39851.1	1	653	64	1.2	0.5	321.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078779	Zfp59	ENSMUST00000108331	ENSMUSP00000103968	TRANSLATION	protein_coding	-	CCDS39851.1	2	653	64	1.2	0.5	321.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000109166	Gm5890	ENSMUST00000190145	ENSMUSP00000146622	TRANSLATION	protein_coding	-	-	1	305	16	1	0	233.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073922	Olfr659	ENSMUST00000098170	ENSMUSP00000095772	TRANSLATION	protein_coding	-	CCDS21625.1	-	322	0	0	8.8	329.6	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000073922	Olfr659	ENSMUST00000214986	ENSMUSP00000149939	TRANSLATION	protein_coding	-	CCDS21625.1	5	322	0	0	8.8	329.6	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000087376	Gm15517	ENSMUST00000187314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087376	Gm15517	ENSMUST00000147088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087376	Gm15517	ENSMUST00000124863	ENSMUSP00000147626	TRANSLATION	protein_coding	-	-	1	28	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000031026	Trim66	ENSMUST00000137704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031026	Trim66	ENSMUST00000033339	ENSMUSP00000033339	TRANSLATION	protein_coding	-	CCDS40082.1	1	1242	16	4.15	0.5	116.8	0	-4,-5	-	-	12.666	MINOR
ENSMUSG00000031026	Trim66	ENSMUST00000106741	ENSMUSP00000102352	TRANSLATION	protein_coding	-	CCDS52360.1	1	1344	24	4.15	0.5	116.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031026	Trim66	ENSMUST00000106739	ENSMUSP00000102350	TRANSLATION	protein_coding	-	CCDS52359.1	1	1233	16	4.15	0.5	116.8	0	-4,-5	-	-	12.666	MINOR
ENSMUSG00000073968	Trim68	ENSMUST00000210855	ENSMUSP00000147991	TRANSLATION	protein_coding	-	CCDS85365.1	1	327	17	1.96	0.5	90	0	-4,-5	-	-	7.47	MINOR
ENSMUSG00000073968	Trim68	ENSMUST00000082175	ENSMUSP00000080813	TRANSLATION	protein_coding	-	CCDS40052.1	1	485	17	4.224	2.9	213.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073968	Trim68	ENSMUST00000209654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073968	Trim68	ENSMUST00000209621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073968	Trim68	ENSMUST00000210406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073940	Hbb-bt	ENSMUST00000098192	ENSMUSP00000095794	TRANSLATION	protein_coding	-	CCDS40060.1	1	147	20	3	11.7	103.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037563	Rps16	ENSMUST00000155805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037563	Rps16	ENSMUST00000082134	ENSMUSP00000103940	TRANSLATION	protein_coding	-	CCDS39858.1	1	146	0	4	21.5	117.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000037563	Rps16	ENSMUST00000152918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030850	Ate1	ENSMUST00000207041	ENSMUSP00000147132	TRANSLATION	protein_coding	start	-	5	242	0	0	0	154.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030850	Ate1	ENSMUST00000178534	ENSMUSP00000136956	TRANSLATION	protein_coding	-	CCDS72051.1	1	509	0	0	0.5	279	0	-4,-5	-	-	5.676	MINOR
ENSMUSG00000030850	Ate1	ENSMUST00000207141	ENSMUSP00000147239	TRANSLATION	nonsense_mediated_decay	-	-	5	55	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030850	Ate1	ENSMUST00000208116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030850	Ate1	ENSMUST00000033139	ENSMUSP00000033139	TRANSLATION	protein_coding	-	CCDS21902.1	1	516	2	0	0.5	284.4	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000030850	Ate1	ENSMUST00000216011	ENSMUSP00000148888	TRANSLATION	protein_coding	-	-	5	559	2	0	0.5	281.2	0	-4,-5	-	-	7.808	ALTERNATIVE:2
ENSMUSG00000030850	Ate1	ENSMUST00000035458	ENSMUSP00000043365	TRANSLATION	protein_coding	-	CCDS52414.1	1	516	2	0	0.5	281.2	0	-4,-5	-	-	7.808	ALTERNATIVE:2
ENSMUSG00000030850	Ate1	ENSMUST00000094017	ENSMUSP00000091556	TRANSLATION	protein_coding	-	CCDS21901.1	1	509	0	0	0.5	282.2	0	-4,-5	-	-	5.868	MINOR
ENSMUSG00000078786	BC024978	ENSMUST00000155931	ENSMUSP00000123290	TRANSLATION	protein_coding	start	-	1	296	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078786	BC024978	ENSMUST00000123108	ENSMUSP00000122238	TRANSLATION	protein_coding	start	-	1	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078786	BC024978	ENSMUST00000179391	ENSMUSP00000137189	TRANSLATION	protein_coding	-	CCDS57529.1	5	361	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000078786	BC024978	ENSMUST00000108379	ENSMUSP00000104016	TRANSLATION	protein_coding	-	CCDS71921.1	1	336	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000030761	Myo7a	ENSMUST00000153657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030761	Myo7a	ENSMUST00000131632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030761	Myo7a	ENSMUST00000205746	ENSMUSP00000146165	TRANSLATION	protein_coding	-	-	5	2164	16	35.755	0.5	1109.4	0	-4,-5	-	-	17.934	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000124787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030761	Myo7a	ENSMUST00000138627	ENSMUSP00000114944	TRANSLATION	protein_coding	stop	-	3	139	6	2.433	0	63.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000152975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030761	Myo7a	ENSMUST00000107128	ENSMUSP00000102745	TRANSLATION	protein_coding	-	CCDS57565.1	5	2215	16	35.255	3.9	1109.4	0	-4,-5	-	-	18.026	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000238540	ENSMUSP00000158620	TRANSLATION	protein_coding	start/stop	-	-	100	0	2.3	0	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000238309	ENSMUSP00000158850	TRANSLATION	protein_coding	stop	-	-	76	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000084979	ENSMUSP00000082046	TRANSLATION	protein_coding	-	CCDS57563.1	1	2166	16	35.755	0.5	1109.4	0	-4,-5	-	-	17.934	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000149079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030761	Myo7a	ENSMUST00000155637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030761	Myo7a	ENSMUST00000156992	ENSMUSP00000146114	TRANSLATION	nonsense_mediated_decay	start	-	5	215	0	4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000107122	ENSMUSP00000102739	TRANSLATION	protein_coding	-	CCDS57564.1	1	2172	16	35.788	0.5	1098.4	0	-4,-5	-	-	17.34	MINOR
ENSMUSG00000030761	Myo7a	ENSMUST00000107127	ENSMUSP00000102744	TRANSLATION	protein_coding	-	CCDS40026.1	5	2177	16	35.755	6.3	1109.4	0	-4,-5	-	-	19.934	PRINCIPAL:1
ENSMUSG00000030747	Dgat2	ENSMUST00000207491	ENSMUSP00000146342	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030747	Dgat2	ENSMUST00000207893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030747	Dgat2	ENSMUST00000207611	ENSMUSP00000146391	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	60.5	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000030747	Dgat2	ENSMUST00000207894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030747	Dgat2	ENSMUST00000208591	ENSMUSP00000147074	TRANSLATION	nonsense_mediated_decay	-	-	5	133	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030747	Dgat2	ENSMUST00000033001	ENSMUSP00000033001	TRANSLATION	protein_coding	-	CCDS21477.1	1	388	0	0	1.5	492	2	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000040650	Cyp2b23	ENSMUST00000077356	ENSMUSP00000076578	TRANSLATION	protein_coding	-	CCDS39846.1	5	491	34	9	1.5	494.3	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056782	Olfr667	ENSMUST00000071362	ENSMUSP00000100470	TRANSLATION	protein_coding	-	CCDS40071.1	-	326	0	0.24	0.5	339.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056782	Olfr667	ENSMUST00000217177	ENSMUSP00000150340	TRANSLATION	protein_coding	-	CCDS40071.1	5	326	0	0.24	0.5	339.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000008789	Ceacam5	ENSMUST00000081907	ENSMUSP00000080582	TRANSLATION	protein_coding	-	CCDS20863.1	1	947	0	5.4	0.5	223	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000044265	Olfm5	ENSMUST00000051137	ENSMUSP00000052174	TRANSLATION	protein_coding	-	CCDS21612.1	1	496	0	2.88	0.5	244.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044265	Olfm5	ENSMUST00000154555	ENSMUSP00000117893	TRANSLATION	protein_coding	stop	-	2	304	0	2.08	0	133.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030830	Itgal	ENSMUST00000120857	ENSMUSP00000113396	TRANSLATION	protein_coding	-	-	1	1201	21	21.83	0	289.3	1	4,-2	-	-	13.572	MINOR
ENSMUSG00000030830	Itgal	ENSMUST00000205695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030830	Itgal	ENSMUST00000117762	ENSMUSP00000113946	TRANSLATION	protein_coding	-	CCDS57588.1	1	1161	21	23.16	1.5	310.4	1	4,-2	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000030830	Itgal	ENSMUST00000170971	ENSMUSP00000131847	TRANSLATION	protein_coding	-	-	5	1163	21	22.896	0	310.4	1	4,-2	-	-	16.974	ALTERNATIVE:2
ENSMUSG00000030830	Itgal	ENSMUST00000106306	ENSMUSP00000101913	TRANSLATION	protein_coding	-	CCDS57589.1	1	1162	21	23.41	1.5	307	1	4,-2	-	-	17.796	PRINCIPAL:4
ENSMUSG00000030830	Itgal	ENSMUST00000118405	ENSMUSP00000112591	TRANSLATION	protein_coding	-	-	1	765	17	13.99	0	203.4	1	-4,0	-	-	3.336	MINOR
ENSMUSG00000002980	Bcam	ENSMUST00000133427	ENSMUSP00000117998	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	1,-1	-	-	-1	MINOR
ENSMUSG00000002980	Bcam	ENSMUST00000003061	ENSMUSP00000003061	TRANSLATION	protein_coding	-	CCDS39803.1	1	622	0	8.71	1.5	214.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002980	Bcam	ENSMUST00000135632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002980	Bcam	ENSMUST00000133271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002980	Bcam	ENSMUST00000155244	ENSMUSP00000121145	TRANSLATION	protein_coding	stop	-	5	193	0	3.75	0	67.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000066279	Chrna10	ENSMUST00000084830	ENSMUSP00000081891	TRANSLATION	protein_coding	-	CCDS40047.1	1	447	0	4.25	3.9	330.1	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000066279	Chrna10	ENSMUST00000211408	ENSMUSP00000147577	TRANSLATION	protein_coding	stop	-	3	47	0	0.27	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000154914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000120425	ENSMUSP00000113039	TRANSLATION	protein_coding	-	CCDS85439.1	3	119	12	0.645	0.5	0	0	-4,-5	-	-	2.958	MINOR
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000135932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000033257	ENSMUSP00000033257	TRANSLATION	protein_coding	-	CCDS21927.1	1	244	20	1.689	1.5	65.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000141920	ENSMUSP00000140277	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0.045	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030960	Eef1akmt2	ENSMUST00000152410	ENSMUSP00000140096	TRANSLATION	nonsense_mediated_decay	-	-	5	104	8	0.045	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036882	Arhgap33	ENSMUST00000208522	ENSMUSP00000146766	TRANSLATION	protein_coding	-	-	3	97	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000036882	Arhgap33	ENSMUST00000044338	ENSMUSP00000038412	TRANSLATION	protein_coding	-	CCDS21095.1	1	1305	0	7.19	0.5	191.4	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000036882	Arhgap33	ENSMUST00000207860	ENSMUSP00000146602	TRANSLATION	protein_coding	-	CCDS21095.1	1	1305	0	7.19	0.5	191.4	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000036882	Arhgap33	ENSMUST00000208538	ENSMUSP00000146767	TRANSLATION	protein_coding	-	CCDS21095.1	1	1305	0	7.19	0.5	191.4	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000036882	Arhgap33	ENSMUST00000207637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036882	Arhgap33	ENSMUST00000207858	ENSMUSP00000146571	TRANSLATION	protein_coding	-	CCDS85264.1	1	1281	0	7.19	0.5	191.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036882	Arhgap33	ENSMUST00000208491	ENSMUSP00000147001	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036882	Arhgap33	ENSMUST00000208723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073795	Spef1l	ENSMUST00000210254	ENSMUSP00000147330	TRANSLATION	protein_coding	-	CCDS85450.1	1	248	0	2.4	0.5	111.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000073795	Spef1l	ENSMUST00000121412	ENSMUSP00000113338	TRANSLATION	protein_coding	-	-	1	248	0	2.4	0	111.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000073795	Spef1l	ENSMUST00000146974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073795	Spef1l	ENSMUST00000097970	ENSMUSP00000095584	TRANSLATION	protein_coding	-	CCDS40172.1	1	307	0	2.4	0.5	111.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000073795	Spef1l	ENSMUST00000209335	ENSMUSP00000148257	TRANSLATION	protein_coding	-	CCDS85449.1	1	223	0	2.4	0.5	111.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233312	ENSMUSP00000156422	TRANSLATION	protein_coding	-	-	-	558	2	3.18	0	162.5	1	1,-3	-	-	7.04	MINOR
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233317	ENSMUSP00000156459	TRANSLATION	protein_coding	-	-	-	850	4	3.66	1.5	371.1	14	1,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233744	ENSMUSP00000156574	TRANSLATION	protein_coding	-	-	-	647	4	3.06	0	296.3	14	1,-3	-	-	10.312	MINOR
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233075	ENSMUSP00000156725	TRANSLATION	protein_coding	-	-	-	565	2	3.28	0	162.5	1	1,-3	-	-	7.238	MINOR
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233231	ENSMUSP00000156706	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0.1	0	0	1	1,-3	-	-	-1	MINOR
ENSMUSG00000091239	Vmn2r76	ENSMUST00000232799	ENSMUSP00000156390	TRANSLATION	protein_coding	-	-	-	581	4	2.58	0	265.1	14	1,-3	-	-	7.84	MINOR
ENSMUSG00000091239	Vmn2r76	ENSMUST00000233928	ENSMUSP00000156824	TRANSLATION	protein_coding	-	-	-	850	4	3.66	1.5	371.1	14	1,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000091239	Vmn2r76	ENSMUST00000165771	ENSMUSP00000127309	TRANSLATION	protein_coding	-	CCDS52298.1	5	853	4	3.66	1.5	371.1	14	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000091006	Vmn2r69	ENSMUST00000233859	ENSMUSP00000156696	TRANSLATION	nonsense_mediated_decay	-	-	-	571	0	2.8	0	149.7	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000091006	Vmn2r69	ENSMUST00000207880	ENSMUSP00000156625	TRANSLATION	nonsense_mediated_decay	-	-	5	167	0	0.42	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000091006	Vmn2r69	ENSMUST00000171213	ENSMUSP00000132726	TRANSLATION	protein_coding	-	CCDS52291.1	5	850	0	2.92	0.5	363.4	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091006	Vmn2r69	ENSMUST00000233336	ENSMUSP00000156451	TRANSLATION	protein_coding	-	-	-	553	0	2.44	0	151	0	-1,-5	-	-	5.016	MINOR
ENSMUSG00000096719	Mrgpra2b	ENSMUST00000172559	ENSMUSP00000133751	TRANSLATION	protein_coding	-	-	1	305	0	0.36	0	56.1	6	-4,-5	-	-	9.27	MINOR
ENSMUSG00000096719	Mrgpra2b	ENSMUST00000119798	ENSMUSP00000113310	TRANSLATION	protein_coding	-	CCDS21296.2	1	331	0	0.66	0.5	56.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048398	Gm5065	ENSMUST00000207531	ENSMUSP00000146867	TRANSLATION	protein_coding	-	-	3	165	0	1	0	100.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048398	Gm5065	ENSMUST00000056639	ENSMUSP00000055799	TRANSLATION	protein_coding	-	-	1	165	0	1	0	100.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063317	Usp31	ENSMUST00000205473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063317	Usp31	ENSMUST00000046929	ENSMUSP00000040037	TRANSLATION	protein_coding	-	CCDS52386.1	5	1344	8	5.14	0.5	199.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030533	Unc45a	ENSMUST00000127997	ENSMUSP00000114428	TRANSLATION	protein_coding	stop	-	2	84	0	1.8	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030533	Unc45a	ENSMUST00000145351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030533	Unc45a	ENSMUST00000133728	ENSMUSP00000123399	TRANSLATION	protein_coding	stop	-	5	273	0	4.4	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030533	Unc45a	ENSMUST00000238999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030533	Unc45a	ENSMUST00000107368	ENSMUSP00000102991	TRANSLATION	protein_coding	-	-	5	1088	0	14.97	0	175.8	1	0,-3	-	-	10.998	MINOR
ENSMUSG00000030533	Unc45a	ENSMUST00000032748	ENSMUSP00000032748	TRANSLATION	protein_coding	-	CCDS21395.1	1	944	0	15.47	6.3	175.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030533	Unc45a	ENSMUST00000141774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030533	Unc45a	ENSMUST00000154428	ENSMUSP00000119665	TRANSLATION	nonsense_mediated_decay	-	-	1	165	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000030533	Unc45a	ENSMUST00000206363	ENSMUSP00000145577	TRANSLATION	protein_coding	start	-	5	113	0	2.13	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030533	Unc45a	ENSMUST00000206032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030533	Unc45a	ENSMUST00000135503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030533	Unc45a	ENSMUST00000206494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035545	Leng8	ENSMUST00000154571	ENSMUSP00000123328	TRANSLATION	protein_coding	stop	-	5	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035545	Leng8	ENSMUST00000144248	ENSMUSP00000120574	TRANSLATION	protein_coding	stop	-	2	131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035545	Leng8	ENSMUST00000121270	ENSMUSP00000112428	TRANSLATION	protein_coding	-	-	5	801	0	0	1.5	89	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000035545	Leng8	ENSMUST00000132086	ENSMUSP00000121129	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035545	Leng8	ENSMUST00000128756	ENSMUSP00000118832	TRANSLATION	protein_coding	stop	-	2	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035545	Leng8	ENSMUST00000155881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035545	Leng8	ENSMUST00000037472	ENSMUSP00000046465	TRANSLATION	protein_coding	-	CCDS20731.1	1	785	0	0	0.5	74.8	0	-4,-5	-	-	5.04	PRINCIPAL:2
ENSMUSG00000035545	Leng8	ENSMUST00000127723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035545	Leng8	ENSMUST00000117274	ENSMUSP00000113223	TRANSLATION	protein_coding	-	-	1	126	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035545	Leng8	ENSMUST00000146434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096516	Olfr628	ENSMUST00000098193	ENSMUSP00000095795	TRANSLATION	protein_coding	-	CCDS52338.1	5	316	0	0.36	2.7	353.7	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096516	Olfr628	ENSMUST00000218266	ENSMUSP00000151622	TRANSLATION	protein_coding	-	CCDS52338.1	-	316	0	0.36	2.7	353.7	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000078799	Sult2a5	ENSMUST00000108525	ENSMUSP00000104165	TRANSLATION	protein_coding	-	CCDS52029.1	1	285	20	6	0.5	270	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062782	Olfr527	ENSMUST00000172230	ENSMUSP00000129414	TRANSLATION	protein_coding	-	CCDS21972.1	-	305	0	0.2	2.7	154	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062782	Olfr527	ENSMUST00000214858	ENSMUSP00000149080	TRANSLATION	protein_coding	-	CCDS21972.1	5	305	0	0.2	2.7	154	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062782	Olfr527	ENSMUST00000214143	ENSMUSP00000148971	TRANSLATION	protein_coding	-	CCDS21972.1	5	305	0	0.2	2.7	154	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096399	Vmn2r35	ENSMUST00000169683	ENSMUSP00000133007	TRANSLATION	protein_coding	-	CCDS51998.1	5	861	0	2.74	0.5	375.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000030876	Mettl9	ENSMUST00000207835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030876	Mettl9	ENSMUST00000033163	ENSMUSP00000033163	TRANSLATION	protein_coding	-	CCDS21800.1	1	318	18	1.08	5.1	461.8	0	1,0	-	-	20	PRINCIPAL:1
ENSMUSG00000030876	Mettl9	ENSMUST00000207351	ENSMUSP00000147071	TRANSLATION	protein_coding	stop	-	5	168	18	1.08	0	287.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030876	Mettl9	ENSMUST00000207332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095301	Olfr476	ENSMUST00000077249	ENSMUSP00000076485	TRANSLATION	protein_coding	-	CCDS21698.1	-	310	0	0.36	3.9	170.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000095301	Olfr476	ENSMUST00000217173	ENSMUSP00000149760	TRANSLATION	protein_coding	-	CCDS21698.1	5	310	0	0.36	3.9	170.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000073954	Olfr594	ENSMUST00000098205	ENSMUSP00000095806	TRANSLATION	protein_coding	-	CCDS21566.1	-	311	0	0.36	7.6	432.3	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000073954	Olfr594	ENSMUST00000214051	ENSMUSP00000149847	TRANSLATION	protein_coding	-	CCDS21566.1	5	311	0	0.36	7.6	432.3	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000063065	Mapk3	ENSMUST00000057669	ENSMUSP00000051619	TRANSLATION	protein_coding	-	CCDS21841.1	1	380	20	8.83	1.5	234.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063065	Mapk3	ENSMUST00000050201	ENSMUSP00000101969	TRANSLATION	protein_coding	-	-	3	380	20	7.58	0	234.4	0	-4,-5	-	-	15.498	MINOR
ENSMUSG00000063065	Mapk3	ENSMUST00000135649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063065	Mapk3	ENSMUST00000145965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063065	Mapk3	ENSMUST00000091328	ENSMUSP00000088880	TRANSLATION	protein_coding	-	-	1	265	10	6.5	0	184.9	0	-4,-5	-	-	4.368	MINOR
ENSMUSG00000063065	Mapk3	ENSMUST00000206272	ENSMUSP00000146179	TRANSLATION	protein_coding	start/stop	-	5	214	11	4.5	0	87.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063065	Mapk3	ENSMUST00000206875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063065	Mapk3	ENSMUST00000205657	ENSMUSP00000146161	TRANSLATION	protein_coding	start/stop	-	5	335	20	7.83	0	218	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090744	Gm6871	ENSMUST00000110214	ENSMUSP00000105843	TRANSLATION	protein_coding	-	-	5	545	44	2.95	0	344.1	0	-4,0	-	-	17.976	PRINCIPAL:5
ENSMUSG00000090744	Gm6871	ENSMUST00000164677	ENSMUSP00000131240	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090744	Gm6871	ENSMUST00000171059	ENSMUSP00000129201	TRANSLATION	protein_coding	-	-	5	153	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000090744	Gm6871	ENSMUST00000073410	ENSMUSP00000073117	TRANSLATION	protein_coding	-	-	5	438	44	2.95	0.5	344.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000095191	Vmn1r249	ENSMUST00000105195	ENSMUSP00000100830	TRANSLATION	protein_coding	-	CCDS52103.1	-	307	0	0	1.5	56.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055116	Arntl	ENSMUST00000210074	ENSMUSP00000147764	TRANSLATION	protein_coding	-	CCDS85390.1	1	613	0	8.65	2.9	177.7	0	-4,-5	-	-	12.876	MINOR
ENSMUSG00000055116	Arntl	ENSMUST00000047321	ENSMUSP00000046235	TRANSLATION	protein_coding	-	CCDS40092.1	1	626	0	8.65	7.5	177.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000055116	Arntl	ENSMUST00000209495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055116	Arntl	ENSMUST00000210238	ENSMUSP00000147989	TRANSLATION	protein_coding	-	CCDS40092.1	5	626	0	8.65	7.5	177.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000055116	Arntl	ENSMUST00000211770	ENSMUSP00000147823	TRANSLATION	protein_coding	-	-	5	633	0	8.65	3.9	177.7	0	-4,-5	-	-	13.338	MINOR
ENSMUSG00000055116	Arntl	ENSMUST00000211547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030980	Knop1	ENSMUST00000126792	ENSMUSP00000114727	TRANSLATION	protein_coding	-	CCDS52376.1	1	347	0	0	0.5	44.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030980	Knop1	ENSMUST00000063607	ENSMUSP00000068142	TRANSLATION	protein_coding	-	CCDS52377.1	1	370	0	0	0.5	44.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030980	Knop1	ENSMUST00000116280	ENSMUSP00000111984	TRANSLATION	protein_coding	-	CCDS40104.1	5	532	0	0	0.5	44.7	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000030980	Knop1	ENSMUST00000106550	ENSMUSP00000102160	TRANSLATION	protein_coding	-	CCDS40104.1	1	532	0	0	0.5	44.7	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000030980	Knop1	ENSMUST00000106549	ENSMUSP00000102159	TRANSLATION	protein_coding	-	CCDS52375.1	1	318	0	0	0.5	44.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030980	Knop1	ENSMUST00000033277	ENSMUSP00000033277	TRANSLATION	protein_coding	start	-	5	189	0	0	0	44.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030980	Knop1	ENSMUST00000152309	ENSMUSP00000117151	TRANSLATION	protein_coding	stop	-	5	192	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054161	Fam83e	ENSMUST00000211124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054161	Fam83e	ENSMUST00000210434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054161	Fam83e	ENSMUST00000129507	ENSMUSP00000114397	TRANSLATION	protein_coding	-	CCDS39959.2	1	481	0	2	1.5	340.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030382	Slc27a5	ENSMUST00000032539	ENSMUSP00000032539	TRANSLATION	protein_coding	-	CCDS20821.1	1	689	23	6.44	0.5	246.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030382	Slc27a5	ENSMUST00000155192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030382	Slc27a5	ENSMUST00000133977	ENSMUSP00000117208	TRANSLATION	protein_coding	start/stop	-	3	195	2	2.02	0	83.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030382	Slc27a5	ENSMUST00000120903	ENSMUSP00000112495	TRANSLATION	protein_coding	-	-	1	418	10	3.138	0	140.4	0	2,-2	-	-	0	MINOR
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000205334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000106129	ENSMUSP00000101735	TRANSLATION	protein_coding	-	-	1	285	0	0	0.5	170.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000205682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000174700	ENSMUSP00000134411	TRANSLATION	protein_coding	start/stop	-	3	97	0	0	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000174271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000094002	ENSMUSP00000091539	TRANSLATION	protein_coding	-	CCDS57590.1	5	644	0	0	0.5	170.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000206005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000172947	ENSMUSP00000134479	TRANSLATION	protein_coding	-	CCDS57591.1	1	691	0	0	0.5	170.6	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000173195	ENSMUSP00000134585	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000238294	ENSMUSP00000158736	TRANSLATION	protein_coding	stop	-	-	311	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030994	D7Ertd443e	ENSMUST00000173754	ENSMUSP00000133963	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033458	Fan1	ENSMUST00000206329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033458	Fan1	ENSMUST00000206778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033458	Fan1	ENSMUST00000163289	ENSMUSP00000130012	TRANSLATION	protein_coding	-	CCDS52265.1	5	1020	4	12	0.5	88.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000033458	Fan1	ENSMUST00000206730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030865	Chp2	ENSMUST00000160828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030865	Chp2	ENSMUST00000033152	ENSMUSP00000033152	TRANSLATION	protein_coding	-	CCDS21814.1	1	196	22	5.5	6.3	54.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000030499	Kctd15	ENSMUST00000032709	ENSMUSP00000032709	TRANSLATION	protein_coding	-	CCDS21141.1	1	283	0	2.48	7.5	59.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030499	Kctd15	ENSMUST00000108070	ENSMUSP00000103705	TRANSLATION	protein_coding	-	CCDS21141.1	1	283	0	2.48	7.5	59.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030499	Kctd15	ENSMUST00000205843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030499	Kctd15	ENSMUST00000206501	ENSMUSP00000145815	TRANSLATION	protein_coding	stop	-	3	49	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030499	Kctd15	ENSMUST00000205419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030499	Kctd15	ENSMUST00000108069	ENSMUSP00000103704	TRANSLATION	protein_coding	-	CCDS21141.1	5	283	0	2.48	7.5	59.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030499	Kctd15	ENSMUST00000127425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030499	Kctd15	ENSMUST00000155093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037166	Ppp1r14a	ENSMUST00000048187	ENSMUSP00000035642	TRANSLATION	protein_coding	-	CCDS21070.1	1	147	0	2.88	6.3	199.4	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000037166	Ppp1r14a	ENSMUST00000207714	ENSMUSP00000146684	TRANSLATION	protein_coding	-	-	3	168	0	2.08	0	166.3	0	-4,0	-	-	8.346	MINOR
ENSMUSG00000035390	Brsk1	ENSMUST00000048248	ENSMUSP00000039517	TRANSLATION	protein_coding	-	CCDS20741.1	1	778	18	12.01	5.1	248.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000035390	Brsk1	ENSMUST00000123637	ENSMUSP00000145821	TRANSLATION	protein_coding	start	-	3	45	0	1.5	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035390	Brsk1	ENSMUST00000205666	ENSMUSP00000145845	TRANSLATION	protein_coding	-	-	1	307	12	6.974	0	237.8	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000035390	Brsk1	ENSMUST00000206024	ENSMUSP00000145970	TRANSLATION	protein_coding	-	CCDS85205.1	1	343	18	7.51	0.5	248.8	0	-4,-6	-	-	12	MINOR
ENSMUSG00000035390	Brsk1	ENSMUST00000120836	ENSMUSP00000113448	TRANSLATION	protein_coding	-	-	5	703	10	10.46	2.4	210.4	0	-4,-5	-	-	7.942	MINOR
ENSMUSG00000010751	Tnfrsf22	ENSMUST00000084396	ENSMUSP00000081432	TRANSLATION	protein_coding	-	CCDS22043.1	2	180	0	2.64	0.5	83.3	0	1,-3	-	-	11.676	PRINCIPAL:3
ENSMUSG00000010751	Tnfrsf22	ENSMUST00000171066	ENSMUSP00000126384	TRANSLATION	protein_coding	-	-	-	196	4	0	0	30.5	0	-4,-7	-	-	6.196	MINOR
ENSMUSG00000010751	Tnfrsf22	ENSMUST00000075588	ENSMUSP00000075018	TRANSLATION	protein_coding	-	CCDS80846.1	1	198	0	2.79	0.5	83.3	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000010751	Tnfrsf22	ENSMUST00000146692	ENSMUSP00000119297	TRANSLATION	protein_coding	-	CCDS22043.1	1	180	0	2.64	0.5	83.3	0	1,-3	-	-	11.676	PRINCIPAL:3
ENSMUSG00000030774	Pak1	ENSMUST00000205757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030774	Pak1	ENSMUST00000206351	ENSMUSP00000146291	TRANSLATION	protein_coding	stop	-	3	118	0	1.75	0	70.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030774	Pak1	ENSMUST00000206984	ENSMUSP00000146055	TRANSLATION	protein_coding	-	CCDS21464.1	5	544	19	10.48	13.6	335.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030774	Pak1	ENSMUST00000156637	ENSMUSP00000138684	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	2.9	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030774	Pak1	ENSMUST00000207017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030774	Pak1	ENSMUST00000033040	ENSMUSP00000033040	TRANSLATION	protein_coding	-	CCDS21464.1	1	544	19	10.48	13.6	335.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036560	Lgi4	ENSMUST00000172001	ENSMUSP00000125865	TRANSLATION	protein_coding	start	-	3	90	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036560	Lgi4	ENSMUST00000039775	ENSMUSP00000041579	TRANSLATION	protein_coding	-	CCDS21124.1	1	537	0	4.74	1.5	103.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036560	Lgi4	ENSMUST00000164725	ENSMUSP00000146008	TRANSLATION	nonsense_mediated_decay	start	-	3	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036560	Lgi4	ENSMUST00000169785	ENSMUSP00000145660	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	2.31	0	46	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000048330	Ric3	ENSMUST00000137385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048330	Ric3	ENSMUST00000133876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048330	Ric3	ENSMUST00000055993	ENSMUSP00000056990	TRANSLATION	protein_coding	-	CCDS21733.1	1	367	0	0	5.1	125.2	0	0,-3	-	-	8	PRINCIPAL:3
ENSMUSG00000048330	Ric3	ENSMUST00000147580	ENSMUSP00000116669	TRANSLATION	nonsense_mediated_decay	start	-	1	22	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000048330	Ric3	ENSMUST00000120876	ENSMUSP00000112788	TRANSLATION	protein_coding	-	CCDS80778.1	1	366	0	0	5.1	125.2	0	0,-3	-	-	8	ALTERNATIVE:1
ENSMUSG00000048330	Ric3	ENSMUST00000129629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030844	Rgs10	ENSMUST00000033133	ENSMUSP00000033133	TRANSLATION	protein_coding	-	CCDS21896.1	1	181	0	4.25	9.6	115	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000030844	Rgs10	ENSMUST00000129144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030844	Rgs10	ENSMUST00000145739	ENSMUSP00000146128	TRANSLATION	protein_coding	-	-	1	93	0	2.448	0	52.1	0	-4,-7	-	-	4.62	MINOR
ENSMUSG00000030844	Rgs10	ENSMUST00000147840	ENSMUSP00000122030	TRANSLATION	protein_coding	stop	-	2	85	0	1.75	0	48.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030844	Rgs10	ENSMUST00000134144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030844	Rgs10	ENSMUST00000129120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053742	Gm5114	ENSMUST00000108017	ENSMUSP00000103652	TRANSLATION	protein_coding	-	CCDS39917.1	1	858	0	0	0.5	204	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000087598	Zfp111	ENSMUST00000142218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087598	Zfp111	ENSMUST00000086006	ENSMUSP00000083169	TRANSLATION	protein_coding	-	CCDS20944.2	1	700	63	1.4	0.5	364	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000087598	Zfp111	ENSMUST00000073833	ENSMUSP00000083174	TRANSLATION	protein_coding	-	CCDS20944.2	5	700	63	1.4	0.5	364	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000087598	Zfp111	ENSMUST00000148050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087598	Zfp111	ENSMUST00000160563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087598	Zfp111	ENSMUST00000056683	ENSMUSP00000129484	TRANSLATION	protein_coding	-	CCDS80674.1	1	701	63	1.4	0.5	364	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000095864	Vmn1r77	ENSMUST00000226525	ENSMUSP00000154363	TRANSLATION	protein_coding	-	-	-	238	0	0	0	83.7	9	-4,-7	-	-	5.862	MINOR
ENSMUSG00000095864	Vmn1r77	ENSMUST00000227320	ENSMUSP00000153872	TRANSLATION	protein_coding	-	CCDS52016.1	-	306	0	0	1.5	85.7	11	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095864	Vmn1r77	ENSMUST00000228213	ENSMUSP00000154253	TRANSLATION	protein_coding	-	-	-	238	0	0	0	83.7	9	-4,-7	-	-	5.862	MINOR
ENSMUSG00000095864	Vmn1r77	ENSMUST00000164446	ENSMUSP00000130869	TRANSLATION	protein_coding	-	CCDS52016.1	-	306	0	0	1.5	85.7	11	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070458	Vmn2r73	ENSMUST00000233079	ENSMUSP00000156903	TRANSLATION	protein_coding	-	-	-	775	5	3.24	0	340.6	11	0,-4	-	-	15.404	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000233115	ENSMUSP00000156444	TRANSLATION	protein_coding	-	-	-	572	4	2.672	0	147.8	0	0,-4	-	-	8.062	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000077478	ENSMUSP00000076687	TRANSLATION	protein_coding	-	CCDS52295.1	5	851	5	3.64	0.5	353.9	11	0,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000070458	Vmn2r73	ENSMUST00000232897	ENSMUSP00000156472	TRANSLATION	protein_coding	-	-	-	475	4	1.972	0	109.9	0	0,-4	-	-	6.664	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000233748	ENSMUSP00000156901	TRANSLATION	protein_coding	-	-	-	551	4	2.372	0	123.1	0	0,-4	-	-	7.462	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000233315	ENSMUSP00000156619	TRANSLATION	protein_coding	-	-	-	754	5	2.94	0	316	11	0,-4	-	-	13.328	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000233729	ENSMUSP00000156568	TRANSLATION	protein_coding	-	-	-	830	5	3.34	0	329.2	11	0,-4	-	-	14.918	MINOR
ENSMUSG00000070458	Vmn2r73	ENSMUST00000232965	ENSMUSP00000156768	TRANSLATION	protein_coding	-	-	-	496	4	2.272	0	134.5	0	0,-4	-	-	7.264	MINOR
ENSMUSG00000038580	Sct	ENSMUST00000046156	ENSMUSP00000041519	TRANSLATION	protein_coding	-	CCDS72069.1	1	139	0	0	0.5	25.9	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000038580	Sct	ENSMUST00000211667	ENSMUSP00000147780	TRANSLATION	protein_coding	-	CCDS85457.1	2	77	0	0	0.5	25.9	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000038580	Sct	ENSMUST00000210928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038580	Sct	ENSMUST00000167790	ENSMUSP00000128729	TRANSLATION	protein_coding	-	CCDS40184.1	1	133	0	0	0.5	25.9	0	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000030650	Tmc5	ENSMUST00000098088	ENSMUSP00000095694	TRANSLATION	protein_coding	-	CCDS52374.1	5	967	0	0	0.5	134.8	12	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030650	Tmc5	ENSMUST00000121744	ENSMUSP00000114137	TRANSLATION	protein_coding	-	CCDS52374.1	1	967	0	0	0.5	134.8	12	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030650	Tmc5	ENSMUST00000155572	ENSMUSP00000118541	TRANSLATION	protein_coding	stop	-	2	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030650	Tmc5	ENSMUST00000121715	ENSMUSP00000112434	TRANSLATION	protein_coding	-	CCDS52374.1	1	967	0	0	0.5	134.8	12	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030650	Tmc5	ENSMUST00000057320	ENSMUSP00000049784	TRANSLATION	protein_coding	-	CCDS21773.1	1	757	0	0	1.5	134.8	12	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033533	Acsm1	ENSMUST00000047929	ENSMUSP00000036140	TRANSLATION	protein_coding	-	CCDS21783.1	1	573	44	12.5	0.5	316.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000033533	Acsm1	ENSMUST00000126367	ENSMUSP00000114725	TRANSLATION	protein_coding	stop	-	3	174	1	2.6	0	57.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033533	Acsm1	ENSMUST00000135683	ENSMUSP00000120146	TRANSLATION	protein_coding	stop	-	1	531	41	11.4	0	236.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030669	Calca	ENSMUST00000032907	ENSMUSP00000032907	TRANSLATION	protein_coding	-	CCDS21763.1	1	136	0	1	1.5	109.1	0	3,-2	-	-	8.055	MINOR
ENSMUSG00000030669	Calca	ENSMUST00000205933	ENSMUSP00000145548	TRANSLATION	protein_coding	-	-	3	76	0	0	0	68.6	0	3,-2	-	-	0.78	MINOR
ENSMUSG00000030669	Calca	ENSMUST00000205560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030669	Calca	ENSMUST00000032906	ENSMUSP00000032906	TRANSLATION	protein_coding	-	CCDS21762.1	1	128	0	1.3	7.5	155.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030669	Calca	ENSMUST00000206156	ENSMUSP00000145756	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	96.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030669	Calca	ENSMUST00000206853	ENSMUSP00000146328	TRANSLATION	protein_coding	-	CCDS21763.1	2	136	0	1	1.5	109.1	0	3,-2	-	-	8.055	MINOR
ENSMUSG00000030669	Calca	ENSMUST00000205714	ENSMUSP00000146280	TRANSLATION	protein_coding	-	-	2	76	0	0	0	68.6	0	3,-2	-	-	0.78	MINOR
ENSMUSG00000030559	Rab38	ENSMUST00000208478	ENSMUSP00000146448	TRANSLATION	protein_coding	-	-	3	121	11	2	0	112.4	0	-4,-7	-	-	6.798	MINOR
ENSMUSG00000030559	Rab38	ENSMUST00000107256	ENSMUSP00000102877	TRANSLATION	protein_coding	-	CCDS21439.1	1	211	20	3.6	10.1	145.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000091594	Gm17067	ENSMUST00000166837	ENSMUSP00000128086	TRANSLATION	protein_coding	-	-	5	354	32	2.25	0.5	246.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091594	Gm17067	ENSMUST00000180131	ENSMUSP00000136460	TRANSLATION	protein_coding	start/stop	-	-	41	5	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007891	Ctsd	ENSMUST00000151120	ENSMUSP00000121203	TRANSLATION	protein_coding	-	CCDS22029.1	1	410	5	7.97	0.5	436.6	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000007891	Ctsd	ENSMUST00000066401	ENSMUSP00000063904	TRANSLATION	protein_coding	-	-	1	404	5	7.64	0	414.2	0	4,-1	-	-	14.996	MINOR
ENSMUSG00000007891	Ctsd	ENSMUST00000153679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095837	Vmn1r246	ENSMUST00000174364	ENSMUSP00000133598	TRANSLATION	protein_coding	-	CCDS71900.1	-	306	0	0	1.5	57.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000070462	Tlnrd1	ENSMUST00000094216	ENSMUSP00000091769	TRANSLATION	protein_coding	-	CCDS21414.1	-	362	0	0.32	7.5	0	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000092579	Vmn1r62	ENSMUST00000237772	ENSMUSP00000157413	TRANSLATION	protein_coding	-	CCDS57477.1	-	300	0	0	0.5	60.5	7	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000092579	Vmn1r62	ENSMUST00000173956	ENSMUSP00000134168	TRANSLATION	protein_coding	-	CCDS57477.1	-	300	0	0	0.5	60.5	7	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000035547	Capn5	ENSMUST00000107112	ENSMUSP00000102729	TRANSLATION	protein_coding	-	CCDS21465.1	1	640	8	6.24	7.5	540	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035547	Capn5	ENSMUST00000040971	ENSMUSP00000048183	TRANSLATION	protein_coding	-	CCDS21465.1	1	640	8	6.24	7.5	540	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035547	Capn5	ENSMUST00000155056	ENSMUSP00000116697	TRANSLATION	protein_coding	stop	-	3	46	0	0.6	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000035547	Capn5	ENSMUST00000129430	ENSMUSP00000121200	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035547	Capn5	ENSMUST00000134638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039176	Polg	ENSMUST00000139597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000127734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000149444	ENSMUSP00000119616	TRANSLATION	nonsense_mediated_decay	-	-	1	498	3	8.43	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000201557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000145154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000201907	ENSMUSP00000144084	TRANSLATION	protein_coding	start/stop	-	1	49	0	1.75	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000139795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000143672	ENSMUSP00000122286	TRANSLATION	protein_coding	start/stop	-	3	243	0	5.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000201030	ENSMUSP00000143923	TRANSLATION	protein_coding	start/stop	-	3	155	0	4.83	0	77.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000201662	ENSMUSP00000144510	TRANSLATION	protein_coding	start	-	3	94	0	2.396	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000142915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039176	Polg	ENSMUST00000154403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000127082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039176	Polg	ENSMUST00000139290	ENSMUSP00000144035	TRANSLATION	protein_coding	start	-	3	69	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000125562	ENSMUSP00000143813	TRANSLATION	protein_coding	stop	-	3	105	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000073889	ENSMUSP00000073551	TRANSLATION	protein_coding	-	CCDS21382.1	1	1217	3	27.04	1.5	201	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000039176	Polg	ENSMUST00000139668	ENSMUSP00000114414	TRANSLATION	protein_coding	start/stop	-	5	236	0	5.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039176	Polg	ENSMUST00000132048	ENSMUSP00000143933	TRANSLATION	nonsense_mediated_decay	-	-	5	261	2	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000095768	Vmn1r111	ENSMUST00000179511	ENSMUSP00000137063	TRANSLATION	protein_coding	-	CCDS52079.1	-	306	0	0	1.5	56.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000007837	Prrg2	ENSMUST00000211084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007837	Prrg2	ENSMUST00000211337	ENSMUSP00000147709	TRANSLATION	protein_coding	-	-	3	90	0	0	0	0	0	-1,-3	-	-	0	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000210690	ENSMUSP00000148014	TRANSLATION	protein_coding	-	CCDS21227.1	1	198	12	1.3	1.5	67	4	-1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000007837	Prrg2	ENSMUST00000210500	ENSMUSP00000147380	TRANSLATION	protein_coding	-	-	5	189	12	1.3	0	67	4	-2,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000007837	Prrg2	ENSMUST00000210493	ENSMUSP00000147844	TRANSLATION	protein_coding	stop	-	2	155	12	1.3	0	67	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000209219	ENSMUSP00000148057	TRANSLATION	protein_coding	stop	-	5	68	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000211014	ENSMUSP00000147977	TRANSLATION	protein_coding	stop	-	3	186	12	1.3	0	67	4	-1,-3	-	-	-1	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000209920	ENSMUSP00000147598	TRANSLATION	nonsense_mediated_decay	-	-	3	113	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000007981	ENSMUSP00000007981	TRANSLATION	protein_coding	-	CCDS21227.1	1	198	12	1.3	1.5	67	4	-1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000007837	Prrg2	ENSMUST00000210101	ENSMUSP00000148121	TRANSLATION	protein_coding	stop	-	2	172	12	1.3	0	67	4	-1,-3	-	-	-1	MINOR
ENSMUSG00000007837	Prrg2	ENSMUST00000209417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062878	Olfr298	ENSMUST00000077800	ENSMUSP00000076973	TRANSLATION	protein_coding	-	CCDS21431.1	-	332	0	0.2	0.5	126.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062878	Olfr298	ENSMUST00000216968	ENSMUSP00000149905	TRANSLATION	protein_coding	-	CCDS21431.1	5	332	0	0.2	0.5	126.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062878	Olfr298	ENSMUST00000217110	ENSMUSP00000150228	TRANSLATION	protein_coding	-	CCDS21431.1	5	332	0	0.2	0.5	126.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062878	Olfr298	ENSMUST00000213223	ENSMUSP00000150196	TRANSLATION	protein_coding	-	CCDS21431.1	5	332	0	0.2	0.5	126.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003423	Pih1d1	ENSMUST00000211709	ENSMUSP00000147567	TRANSLATION	protein_coding	stop	-	3	175	0	3.08	0	61.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003423	Pih1d1	ENSMUST00000209954	ENSMUSP00000147858	TRANSLATION	protein_coding	stop	-	3	136	0	3.83	0	92.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003423	Pih1d1	ENSMUST00000211336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003423	Pih1d1	ENSMUST00000209400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003423	Pih1d1	ENSMUST00000085375	ENSMUSP00000082490	TRANSLATION	protein_coding	-	CCDS21232.1	1	290	0	5.58	2.7	161.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003423	Pih1d1	ENSMUST00000210139	ENSMUSP00000148186	TRANSLATION	protein_coding	-	CCDS21232.1	1	290	0	5.58	2.7	161.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003423	Pih1d1	ENSMUST00000211414	ENSMUSP00000147474	TRANSLATION	protein_coding	stop	-	3	49	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003423	Pih1d1	ENSMUST00000209847	ENSMUSP00000147265	TRANSLATION	protein_coding	stop	-	2	99	0	2.75	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003423	Pih1d1	ENSMUST00000107811	ENSMUSP00000103441	TRANSLATION	protein_coding	-	CCDS21232.1	1	290	0	5.58	2.7	161.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099689	Zfp383	ENSMUST00000187028	ENSMUSP00000141019	TRANSLATION	nonsense_mediated_decay	-	-	2	143	0	1	0	83.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000099689	Zfp383	ENSMUST00000186475	ENSMUSP00000140742	TRANSLATION	protein_coding	-	CCDS80690.1	1	490	44	1.6	1.5	333.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000070348	Ccnd1	ENSMUST00000093962	ENSMUSP00000091495	TRANSLATION	protein_coding	-	CCDS22055.1	1	295	0	5	7.5	204.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000070348	Ccnd1	ENSMUST00000208193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070348	Ccnd1	ENSMUST00000135985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074199	Krtdap	ENSMUST00000189673	ENSMUSP00000139443	TRANSLATION	protein_coding	-	-	1	77	0	0	0	55.8	0	3,-2	-	-	1.368	MINOR
ENSMUSG00000074199	Krtdap	ENSMUST00000190990	ENSMUSP00000139461	TRANSLATION	protein_coding	-	-	1	91	0	0	0	104.3	0	3,-2	-	-	4.278	MINOR
ENSMUSG00000074199	Krtdap	ENSMUST00000187493	ENSMUSP00000140737	TRANSLATION	protein_coding	-	-	2	88	0	0	1.2	88.9	0	3,-2	-	-	3.354	MINOR
ENSMUSG00000074199	Krtdap	ENSMUST00000098559	ENSMUSP00000096159	TRANSLATION	protein_coding	-	CCDS21110.1	1	102	0	0	0.5	133	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000074199	Krtdap	ENSMUST00000188036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074199	Krtdap	ENSMUST00000190480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074199	Krtdap	ENSMUST00000189962	ENSMUSP00000140489	TRANSLATION	protein_coding	-	-	3	57	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000074199	Krtdap	ENSMUST00000190589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074199	Krtdap	ENSMUST00000186077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000163474	ENSMUSP00000126619	TRANSLATION	protein_coding	-	-	5	241	0	0.51	0	0	1	1,-3	-	-	2.754	MINOR
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000168636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000013497	ENSMUSP00000013497	TRANSLATION	protein_coding	-	CCDS21172.1	1	367	0	1.11	0.5	0	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000163619	ENSMUSP00000131071	TRANSLATION	protein_coding	-	-	1	117	0	0.6	0	0	0	1,-3	-	-	3.246	MINOR
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000171174	ENSMUSP00000129888	TRANSLATION	nonsense_mediated_decay	-	-	1	367	0	1.11	0.5	0	2	1,-3	-	-	-1	MINOR
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000191516	ENSMUSP00000139468	TRANSLATION	protein_coding	-	CCDS21172.1	1	367	0	1.11	0.5	0	2	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000168883	ENSMUSP00000129976	TRANSLATION	protein_coding	stop	-	5	36	0	0.45	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000013353	4931406B18Rik	ENSMUST00000168213	ENSMUSP00000129928	TRANSLATION	nonsense_mediated_decay	-	-	1	130	0	0.51	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000044881	Coa4	ENSMUST00000120454	ENSMUSP00000114098	TRANSLATION	protein_coding	-	CCDS40037.1	1	87	0	0	6.3	28	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000044881	Coa4	ENSMUST00000054310	ENSMUSP00000053727	TRANSLATION	protein_coding	-	CCDS40037.1	1	87	0	0	6.3	28	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000044881	Coa4	ENSMUST00000208772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044452	Zfp507	ENSMUST00000206003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044452	Zfp507	ENSMUST00000061586	ENSMUSP00000058609	TRANSLATION	protein_coding	-	CCDS52204.1	1	941	26	1.94	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044452	Zfp507	ENSMUST00000205670	ENSMUSP00000146278	TRANSLATION	protein_coding	stop	-	3	120	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044452	Zfp507	ENSMUST00000187282	ENSMUSP00000140940	TRANSLATION	protein_coding	stop	-	3	145	5	0.315	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044452	Zfp507	ENSMUST00000206615	ENSMUSP00000145751	TRANSLATION	protein_coding	start	-	1	303	18	1.94	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044452	Zfp507	ENSMUST00000206761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044452	Zfp507	ENSMUST00000144656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030643	Rab30	ENSMUST00000208470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030643	Rab30	ENSMUST00000208945	ENSMUSP00000146581	TRANSLATION	protein_coding	stop	-	3	107	16	2.75	0	127	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030643	Rab30	ENSMUST00000107179	ENSMUSP00000102797	TRANSLATION	protein_coding	-	-	5	175	19	3.5	3.4	131.7	0	-4,-6	-	-	10.498	MINOR
ENSMUSG00000030643	Rab30	ENSMUST00000107180	ENSMUSP00000102798	TRANSLATION	protein_coding	-	CCDS21450.1	1	203	23	4.25	19.5	196	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000030643	Rab30	ENSMUST00000032879	ENSMUSP00000032879	TRANSLATION	protein_coding	-	CCDS21450.1	1	203	23	4.25	19.5	196	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000110195	Pde2a	ENSMUST00000210364	ENSMUSP00000148212	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000110195	Pde2a	ENSMUST00000163751	ENSMUSP00000131553	TRANSLATION	protein_coding	-	CCDS52330.1	1	939	19	19.5	1.5	347.5	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000110195	Pde2a	ENSMUST00000209315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110195	Pde2a	ENSMUST00000210092	ENSMUSP00000147884	TRANSLATION	nonsense_mediated_decay	-	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000110195	Pde2a	ENSMUST00000210535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110195	Pde2a	ENSMUST00000211051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110195	Pde2a	ENSMUST00000209695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110195	Pde2a	ENSMUST00000166652	ENSMUSP00000127521	TRANSLATION	protein_coding	-	CCDS40043.1	1	935	19	19.5	1.5	345.8	0	-4,-2	-	-	17.898	PRINCIPAL:3
ENSMUSG00000110195	Pde2a	ENSMUST00000210100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110195	Pde2a	ENSMUST00000209537	ENSMUSP00000147553	TRANSLATION	protein_coding	-	CCDS85351.1	1	945	19	19.5	0.5	345.8	0	-4,-6	-	-	17.898	ALTERNATIVE:2
ENSMUSG00000110195	Pde2a	ENSMUST00000210348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110195	Pde2a	ENSMUST00000211368	ENSMUSP00000147847	TRANSLATION	protein_coding	-	CCDS40043.1	5	935	19	19.5	1.5	345.8	0	-4,-2	-	-	17.898	PRINCIPAL:3
ENSMUSG00000054046	Klk13	ENSMUST00000066834	ENSMUSP00000065308	TRANSLATION	protein_coding	-	CCDS39933.1	1	276	8	4.83	3.9	249.4	0	2,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000054046	Klk13	ENSMUST00000205457	ENSMUSP00000145875	TRANSLATION	protein_coding	stop	-	3	107	1	2	0	84.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054046	Klk13	ENSMUST00000206554	ENSMUSP00000145746	TRANSLATION	protein_coding	stop	-	3	95	3	1.5	0	58.1	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025813	Homer2	ENSMUST00000207371	ENSMUSP00000147030	TRANSLATION	nonsense_mediated_decay	-	-	1	252	3	2.4	0	36.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025813	Homer2	ENSMUST00000207983	ENSMUSP00000146787	TRANSLATION	protein_coding	-	CCDS40009.1	1	354	8	4.8148	9.4	118.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000025813	Homer2	ENSMUST00000207039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025813	Homer2	ENSMUST00000098326	ENSMUSP00000095931	TRANSLATION	protein_coding	-	CCDS52284.1	5	290	3	3.4848	0.5	36.1	0	-4,-7	-	-	6.666	MINOR
ENSMUSG00000025813	Homer2	ENSMUST00000207991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025813	Homer2	ENSMUST00000026922	ENSMUSP00000026922	TRANSLATION	protein_coding	-	CCDS85329.1	1	343	8	4.63	6.6	118.2	0	-4,-6	-	-	19.629	MINOR
ENSMUSG00000025813	Homer2	ENSMUST00000208107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025813	Homer2	ENSMUST00000208937	ENSMUSP00000146521	TRANSLATION	protein_coding	stop	-	3	179	3	2.5848	0	36.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025813	Homer2	ENSMUST00000207289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050440	Hamp	ENSMUST00000062620	ENSMUSP00000055404	TRANSLATION	protein_coding	-	CCDS39895.1	1	83	0	0	1.5	71.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000053964	Lgals4	ENSMUST00000126603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053964	Lgals4	ENSMUST00000066723	ENSMUSP00000066461	TRANSLATION	protein_coding	-	CCDS21058.1	1	326	14	7.112	1.5	258.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000053964	Lgals4	ENSMUST00000125155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053964	Lgals4	ENSMUST00000151547	ENSMUSP00000141005	TRANSLATION	nonsense_mediated_decay	start	-	5	160	9	2.862	0	116.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053964	Lgals4	ENSMUST00000127093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053964	Lgals4	ENSMUST00000208971	ENSMUSP00000146429	TRANSLATION	protein_coding	-	-	1	302	14	6.58	0	258.8	0	-4,-6	-	-	16.938	ALTERNATIVE:2
ENSMUSG00000053964	Lgals4	ENSMUST00000137468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010307	Tmem86a	ENSMUST00000211066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010307	Tmem86a	ENSMUST00000010451	ENSMUSP00000010451	TRANSLATION	protein_coding	-	CCDS39966.1	1	241	0	0	9.7	150.4	0	-2,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000030858	Fam24b	ENSMUST00000033146	ENSMUSP00000033146	TRANSLATION	protein_coding	-	CCDS21912.1	5	119	0	0	0.5	55.6	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030858	Fam24b	ENSMUST00000188899	ENSMUSP00000139545	TRANSLATION	protein_coding	-	CCDS21912.1	1	119	0	0	0.5	55.6	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063931	Pepd	ENSMUST00000160320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063931	Pepd	ENSMUST00000160459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063931	Pepd	ENSMUST00000161900	ENSMUSP00000133634	TRANSLATION	nonsense_mediated_decay	start	-	5	80	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063931	Pepd	ENSMUST00000162509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063931	Pepd	ENSMUST00000075068	ENSMUSP00000075683	TRANSLATION	protein_coding	-	CCDS21143.1	1	493	10	11.382	7.5	293.5	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000063931	Pepd	ENSMUST00000161128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015957	Wnt11	ENSMUST00000165240	ENSMUSP00000131770	TRANSLATION	nonsense_mediated_decay	-	-	1	154	0	1.5514	0	90.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000015957	Wnt11	ENSMUST00000208062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015957	Wnt11	ENSMUST00000165122	ENSMUSP00000125789	TRANSLATION	protein_coding	stop	-	3	99	0	0.525	0	41.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000015957	Wnt11	ENSMUST00000067495	ENSMUSP00000064333	TRANSLATION	protein_coding	-	CCDS21475.1	5	354	0	3.6614	9.5	355	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000015957	Wnt11	ENSMUST00000167303	ENSMUSP00000132166	TRANSLATION	protein_coding	-	CCDS21475.1	1	354	0	3.6614	9.5	355	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000015957	Wnt11	ENSMUST00000163913	ENSMUSP00000126428	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000070425	Xntrpc	ENSMUST00000155078	ENSMUSP00000123466	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	173	0	1.2	0	67.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000070425	Xntrpc	ENSMUST00000123372	ENSMUSP00000121068	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	405	8	2.82	1.5	177.5	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000070425	Xntrpc	ENSMUST00000084843	ENSMUSP00000081903	TRANSLATION	protein_coding,RT	-	CCDS21524.2	5	1264	4	4.26	0.5	340.2	0	-4,-6	-	-	-1	PRINCIPAL:2
ENSMUSG00000070425	Xntrpc	ENSMUST00000139104	ENSMUSP00000122430	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	171	0	1.35	0	65.9	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000078611	Gm5901	ENSMUST00000211523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078611	Gm5901	ENSMUST00000106805	ENSMUSP00000102417	TRANSLATION	protein_coding	-	CCDS57573.1	5	333	0	0	7.5	471.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000078611	Gm5901	ENSMUST00000209233	ENSMUSP00000147919	TRANSLATION	protein_coding	start	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000168623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001249	Hpn	ENSMUST00000108102	ENSMUSP00000103737	TRANSLATION	protein_coding	-	CCDS52188.1	1	436	6	9.75	0.5	476.4	1	-4,-5	-	-	18	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000168884	ENSMUSP00000131658	TRANSLATION	protein_coding	-	CCDS52187.1	1	416	6	9.75	7.5	476.4	1	-3,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001249	Hpn	ENSMUST00000039435	ENSMUSP00000038149	TRANSLATION	protein_coding	-	CCDS71936.1	1	445	6	9.75	0.5	476.4	1	-4,-5	-	-	18	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000171225	ENSMUSP00000130966	TRANSLATION	protein_coding	start	-	3	32	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000164929	ENSMUSP00000127229	TRANSLATION	protein_coding	stop	-	3	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000165480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001249	Hpn	ENSMUST00000171259	ENSMUSP00000132307	TRANSLATION	protein_coding	start	-	5	179	4	4.73	0	151	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000165124	ENSMUSP00000145624	TRANSLATION	nonsense_mediated_decay	-	-	2	137	0	2.5	0	188.6	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000001249	Hpn	ENSMUST00000167719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001249	Hpn	ENSMUST00000164340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000205573	ENSMUSP00000146105	TRANSLATION	protein_coding	-	CCDS20955.1	1	631	0	11.2	1.5	325.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051768	Xrcc1	ENSMUST00000205564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000206153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051768	Xrcc1	ENSMUST00000206889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051768	Xrcc1	ENSMUST00000205561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000205453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051768	Xrcc1	ENSMUST00000206067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000063249	ENSMUSP00000070995	TRANSLATION	protein_coding	-	CCDS20955.1	1	631	0	11.2	1.5	325.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051768	Xrcc1	ENSMUST00000205575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000205804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000206429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000206538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051768	Xrcc1	ENSMUST00000206620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094053	Scgb2b7	ENSMUST00000178258	ENSMUSP00000136731	TRANSLATION	protein_coding	-	CCDS57536.1	1	112	0	1.25	0.5	99.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094053	Scgb2b7	ENSMUST00000188968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030785	Cox6a2	ENSMUST00000033049	ENSMUSP00000033049	TRANSLATION	protein_coding	-	CCDS21891.1	1	97	0	2.5	8.8	0	0	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000070527	Mkrn3	ENSMUST00000094340	ENSMUSP00000091898	TRANSLATION	protein_coding	-	CCDS21327.1	-	544	16	0	0.5	85.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063594	Gng8	ENSMUST00000206998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063594	Gng8	ENSMUST00000205716	ENSMUSP00000145567	TRANSLATION	protein_coding	-	CCDS20856.1	3	70	0	1.75	21.5	58.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063594	Gng8	ENSMUST00000078182	ENSMUSP00000077314	TRANSLATION	protein_coding	-	CCDS20856.1	1	70	0	1.75	21.5	58.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063594	Gng8	ENSMUST00000205459	ENSMUSP00000145533	TRANSLATION	protein_coding	-	CCDS20856.1	3	70	0	1.75	21.5	58.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063594	Gng8	ENSMUST00000205838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063594	Gng8	ENSMUST00000205598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046027	Stard5	ENSMUST00000117410	ENSMUSP00000112781	TRANSLATION	protein_coding	-	-	1	206	0	4.5	0	51.4	0	-4,-5	-	-	8.208	MINOR
ENSMUSG00000046027	Stard5	ENSMUST00000146469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046027	Stard5	ENSMUST00000130723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046027	Stard5	ENSMUST00000075418	ENSMUSP00000074872	TRANSLATION	protein_coding	-	CCDS21411.1	1	213	0	5.5	7.5	73.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046027	Stard5	ENSMUST00000150174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053877	Srcap	ENSMUST00000186954	ENSMUSP00000139536	TRANSLATION	protein_coding	-	-	5	3114	7	7.9	0	371.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000053877	Srcap	ENSMUST00000189449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053877	Srcap	ENSMUST00000098025	ENSMUSP00000095635	TRANSLATION	protein_coding	-	-	5	168	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000053877	Srcap	ENSMUST00000187442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053877	Srcap	ENSMUST00000188124	ENSMUSP00000140882	TRANSLATION	protein_coding	-	-	1	445	0	0	0	72.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000053877	Srcap	ENSMUST00000066582	ENSMUSP00000063817	TRANSLATION	protein_coding	-	-	1	936	7	5.1	0	304.7	0	-4,-6	-	-	8.412	MINOR
ENSMUSG00000053877	Srcap	ENSMUST00000189136	ENSMUSP00000141098	TRANSLATION	protein_coding	-	-	1	225	0	0	0	72.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000053877	Srcap	ENSMUST00000185401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053877	Srcap	ENSMUST00000189812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053877	Srcap	ENSMUST00000190390	ENSMUSP00000139399	TRANSLATION	protein_coding	-	-	5	3210	7	7.9	0	371.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000053877	Srcap	ENSMUST00000186672	ENSMUSP00000140395	TRANSLATION	protein_coding	stop	-	5	1192	7	5.1	0	304.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053877	Srcap	ENSMUST00000186759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053877	Srcap	ENSMUST00000187164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053877	Srcap	ENSMUST00000187040	ENSMUSP00000140036	TRANSLATION	protein_coding	-	CCDS80806.1	5	3271	7	7.9	0.5	371.2	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000073785	Krtap5-5	ENSMUST00000097942	ENSMUSP00000095555	TRANSLATION	protein_coding	-	CCDS22026.1	-	241	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000004542	Psg19	ENSMUST00000004657	ENSMUSP00000004657	TRANSLATION	protein_coding	-	CCDS20877.1	1	475	0	3.02	0.5	165.1	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004542	Psg19	ENSMUST00000182916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004542	Psg19	ENSMUST00000182681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004542	Psg19	ENSMUST00000182853	ENSMUSP00000138621	TRANSLATION	protein_coding	-	-	1	355	0	2.22	0	123.3	0	-1,-5	-	-	7.89	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000205996	ENSMUSP00000146153	TRANSLATION	protein_coding	stop	-	3	87	8	2.33	0	24.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000206211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030538	Cib1	ENSMUST00000206802	ENSMUSP00000145564	TRANSLATION	nonsense_mediated_decay	-	-	3	43	2	1.18	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000206618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030538	Cib1	ENSMUST00000071457	ENSMUSP00000071401	TRANSLATION	protein_coding	-	CCDS80740.1	1	143	15	3.58	0.5	68.5	0	-4,-6	-	-	13.668	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000065163	ENSMUSP00000070901	TRANSLATION	protein_coding	-	CCDS21392.1	1	191	17	5.08	7.5	68.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030538	Cib1	ENSMUST00000123279	ENSMUSP00000118926	TRANSLATION	protein_coding	stop	-	2	113	14	3.08	0.5	68.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000206084	ENSMUSP00000145961	TRANSLATION	protein_coding	-	CCDS85324.1	3	186	17	5.08	0.5	68.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000030538	Cib1	ENSMUST00000144295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030538	Cib1	ENSMUST00000131402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030763	Lcmt1	ENSMUST00000206488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030763	Lcmt1	ENSMUST00000206727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030763	Lcmt1	ENSMUST00000206574	ENSMUSP00000145539	TRANSLATION	protein_coding	-	-	5	332	15	9.91	3.9	130.8	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000030763	Lcmt1	ENSMUST00000033025	ENSMUSP00000033025	TRANSLATION	protein_coding	-	CCDS40118.1	1	332	15	9.91	3.9	130.8	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000030763	Lcmt1	ENSMUST00000206721	ENSMUSP00000146184	TRANSLATION	protein_coding	stop	-	3	121	1	1.33	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000030763	Lcmt1	ENSMUST00000205880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044705	Olfr670	ENSMUST00000050482	ENSMUSP00000060289	TRANSLATION	protein_coding	-	CCDS21634.1	-	312	0	0.42	5.2	402.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044705	Olfr670	ENSMUST00000214216	ENSMUSP00000151138	TRANSLATION	protein_coding	-	CCDS21634.1	5	312	0	0.42	5.2	402.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030744	Rps3	ENSMUST00000032998	ENSMUSP00000032998	TRANSLATION	protein_coding	-	CCDS40031.1	1	243	0	6.16	19.3	44.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000030744	Rps3	ENSMUST00000107096	ENSMUSP00000102713	TRANSLATION	protein_coding	-	-	3	191	0	4.33	0	44.8	0	-4,-6	-	-	8.34	MINOR
ENSMUSG00000030744	Rps3	ENSMUST00000208532	ENSMUSP00000146709	TRANSLATION	protein_coding	-	-	5	144	0	3.33	0	44.8	0	-4,-6	-	-	6.342	MINOR
ENSMUSG00000030744	Rps3	ENSMUST00000128174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030744	Rps3	ENSMUST00000128725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030528	Blm	ENSMUST00000206901	ENSMUSP00000146062	TRANSLATION	protein_coding	start	-	5	155	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030528	Blm	ENSMUST00000170315	ENSMUSP00000127995	TRANSLATION	protein_coding	-	CCDS52281.1	1	1419	17	15.03	0.5	1236.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000030528	Blm	ENSMUST00000205584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030528	Blm	ENSMUST00000081314	ENSMUSP00000080062	TRANSLATION	protein_coding	-	CCDS40000.1	1	1416	17	15.03	0.5	1236.1	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000030528	Blm	ENSMUST00000205263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030528	Blm	ENSMUST00000206518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030528	Blm	ENSMUST00000206989	ENSMUSP00000146098	TRANSLATION	nonsense_mediated_decay	start	-	5	42	0	1.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030528	Blm	ENSMUST00000206948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030528	Blm	ENSMUST00000205730	ENSMUSP00000145573	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030528	Blm	ENSMUST00000205713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030495	Slc7a10	ENSMUST00000001854	ENSMUSP00000001854	TRANSLATION	protein_coding	-	CCDS21146.1	1	530	0	3.331	1.5	119.1	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030495	Slc7a10	ENSMUST00000135452	ENSMUSP00000127577	TRANSLATION	protein_coding	-	-	1	125	0	0.7	0	30.3	2	-4,-5	-	-	1.41	MINOR
ENSMUSG00000030495	Slc7a10	ENSMUST00000167441	ENSMUSP00000129954	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030495	Slc7a10	ENSMUST00000146959	ENSMUSP00000127311	TRANSLATION	protein_coding	start	-	3	83	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000030495	Slc7a10	ENSMUST00000131048	ENSMUSP00000118331	TRANSLATION	nonsense_mediated_decay	-	-	5	395	0	2.851	0	82.7	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000000605	Clcn4	ENSMUST00000000619	ENSMUSP00000000619	TRANSLATION	protein_coding	-	CCDS20786.1	1	747	0	7.36	0.5	412.7	21	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000000605	Clcn4	ENSMUST00000210444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000605	Clcn4	ENSMUST00000209916	ENSMUSP00000147449	TRANSLATION	nonsense_mediated_decay	-	-	2	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000605	Clcn4	ENSMUST00000210362	ENSMUSP00000147627	TRANSLATION	protein_coding	stop	-	3	134	0	1.92	0	43.8	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000000605	Clcn4	ENSMUST00000211551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000605	Clcn4	ENSMUST00000210061	ENSMUSP00000148174	TRANSLATION	protein_coding	-	CCDS85213.1	1	716	0	6.88	0.5	369.8	19	-4,-6	-	-	8.466	MINOR
ENSMUSG00000000605	Clcn4	ENSMUST00000210594	ENSMUSP00000147562	TRANSLATION	protein_coding	-	CCDS85212.1	5	687	0	7.36	0.5	412.7	20	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000000605	Clcn4	ENSMUST00000210809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000605	Clcn4	ENSMUST00000210989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000605	Clcn4	ENSMUST00000211574	ENSMUSP00000148061	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050063	Klk6	ENSMUST00000177514	ENSMUSP00000135591	TRANSLATION	protein_coding	stop	-	5	129	5	2.48	0	109.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050063	Klk6	ENSMUST00000107967	ENSMUSP00000103601	TRANSLATION	protein_coding	-	CCDS21184.2	1	253	9	5.23	1.5	245.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000050063	Klk6	ENSMUST00000107968	ENSMUSP00000103602	TRANSLATION	protein_coding	-	CCDS21184.2	1	253	9	5.23	1.5	245.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000050063	Klk6	ENSMUST00000107966	ENSMUSP00000103600	TRANSLATION	protein_coding	-	CCDS21184.2	1	253	9	5.23	1.5	245.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000015980	Lrrc27	ENSMUST00000016124	ENSMUSP00000016124	TRANSLATION	protein_coding	-	CCDS21953.1	1	523	0	3.16	0.5	43.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000015980	Lrrc27	ENSMUST00000142176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015980	Lrrc27	ENSMUST00000156768	ENSMUSP00000116624	TRANSLATION	protein_coding	stop	-	3	100	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015980	Lrrc27	ENSMUST00000126199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015980	Lrrc27	ENSMUST00000152992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015980	Lrrc27	ENSMUST00000106104	ENSMUSP00000101710	TRANSLATION	protein_coding	-	CCDS52426.1	1	394	0	3.16	0.5	43.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000015980	Lrrc27	ENSMUST00000130248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015980	Lrrc27	ENSMUST00000126213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015980	Lrrc27	ENSMUST00000135509	ENSMUSP00000116827	TRANSLATION	protein_coding	stop	-	5	179	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040811	Eml2	ENSMUST00000144054	ENSMUSP00000146046	TRANSLATION	protein_coding	stop	-	2	82	0	2	0	107.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040811	Eml2	ENSMUST00000146095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040811	Eml2	ENSMUST00000048502	ENSMUSP00000037654	TRANSLATION	protein_coding	-	CCDS52055.1	1	668	0	17.16	0.5	177.6	0	-4,-6	-	-	8.154	MINOR
ENSMUSG00000040811	Eml2	ENSMUST00000141792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040811	Eml2	ENSMUST00000117338	ENSMUSP00000112491	TRANSLATION	protein_coding	-	CCDS85223.1	5	841	0	18.41	0.5	200	0	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040811	Eml2	ENSMUST00000148246	ENSMUSP00000115466	TRANSLATION	nonsense_mediated_decay	-	-	5	427	0	10.91	0	151.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040811	Eml2	ENSMUST00000120595	ENSMUSP00000112447	TRANSLATION	protein_coding	-	CCDS85224.1	1	649	0	17.41	6.5	200	0	-4,-5	-	-	12.002	PRINCIPAL:3
ENSMUSG00000040811	Eml2	ENSMUST00000141718	ENSMUSP00000146239	TRANSLATION	protein_coding	stop	-	3	150	0	4.25	0	123.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040891	Foxa3	ENSMUST00000036018	ENSMUSP00000043173	TRANSLATION	protein_coding	-	CCDS20886.1	1	353	0	1.4	1.5	180.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095212	Olfr473	ENSMUST00000084761	ENSMUSP00000081816	TRANSLATION	protein_coding	-	CCDS21696.1	-	310	0	0.2	3.9	162.5	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000095212	Olfr473	ENSMUST00000217618	ENSMUSP00000150610	TRANSLATION	protein_coding	-	CCDS21696.1	2	310	0	0.2	3.9	162.5	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000078616	Trim30c	ENSMUST00000106828	ENSMUSP00000102441	TRANSLATION	protein_coding	-	-	5	513	16	4.228	0	107.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035203	Epn1	ENSMUST00000045277	ENSMUSP00000043340	TRANSLATION	protein_coding	-	CCDS20758.1	1	575	9	3.25	5.1	203.3	0	-4,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000035203	Epn1	ENSMUST00000152083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035203	Epn1	ENSMUST00000155436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035203	Epn1	ENSMUST00000146317	ENSMUSP00000116571	TRANSLATION	protein_coding	stop	-	3	90	9	2.25	0	115.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035203	Epn1	ENSMUST00000208634	ENSMUSP00000146638	TRANSLATION	protein_coding	-	-	5	576	9	3.25	5.1	203.3	0	-4,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000035203	Epn1	ENSMUST00000098845	ENSMUSP00000096445	TRANSLATION	protein_coding	-	CCDS20758.1	1	575	9	3.25	5.1	203.3	0	-4,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000035203	Epn1	ENSMUST00000153169	ENSMUSP00000122594	TRANSLATION	protein_coding	stop	-	2	54	6	1	0	45.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000118318	Vmn1r183	ENSMUST00000086012	ENSMUSP00000083176	TRANSLATION	protein_coding	-	CCDS20940.1	-	305	0	0	0.5	61.2	4	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000118318	Vmn1r183	ENSMUST00000236959	ENSMUSP00000157576	TRANSLATION	protein_coding	-	CCDS20940.1	-	305	0	0	0.5	61.2	4	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000086784	Isoc2a	ENSMUST00000125249	ENSMUSP00000131514	TRANSLATION	protein_coding	-	CCDS51978.1	1	206	0	3.9	6.5	0	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000051900	Abca16	ENSMUST00000144122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051900	Abca16	ENSMUST00000056042	ENSMUSP00000061094	TRANSLATION	protein_coding	-	-	5	1677	17	6.68	0.5	338.1	11	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000051900	Abca16	ENSMUST00000153845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051900	Abca16	ENSMUST00000120490	ENSMUSP00000112736	TRANSLATION	protein_coding	-	-	5	1678	17	6.68	1.5	338.1	11	-4,-6	-	-	18	PRINCIPAL:5
ENSMUSG00000078798	Sult2a1	ENSMUST00000108522	ENSMUSP00000104162	TRANSLATION	protein_coding	-	CCDS52031.1	1	285	20	6	0.5	271.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005566	Trim28	ENSMUST00000123603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000123778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000149061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000148354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000125136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000142421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000005705	ENSMUSP00000005705	TRANSLATION	protein_coding	-	CCDS20823.1	1	834	20	6.15	1.5	136	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000005566	Trim28	ENSMUST00000129122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000128951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005566	Trim28	ENSMUST00000209577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094098	Vmn2r44	ENSMUST00000166499	ENSMUSP00000132467	TRANSLATION	protein_coding	-	CCDS57485.1	5	861	0	2.74	0.5	393.6	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000094098	Vmn2r44	ENSMUST00000232847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094149	Vmn1r252	ENSMUST00000167253	ENSMUSP00000129429	TRANSLATION	protein_coding	-	CCDS52112.1	-	306	0	0	1.5	58.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054310	Obox1	ENSMUST00000172881	ENSMUSP00000134688	TRANSLATION	protein_coding	-	CCDS20837.1	5	204	0	1	0.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054310	Obox1	ENSMUST00000181001	ENSMUSP00000138010	TRANSLATION	protein_coding	-	CCDS20837.1	5	204	0	1	0.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054310	Obox1	ENSMUST00000173443	ENSMUSP00000134043	TRANSLATION	protein_coding	-	CCDS20837.1	5	204	0	1	0.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054310	Obox1	ENSMUST00000173245	ENSMUSP00000133496	TRANSLATION	protein_coding	stop	-	5	188	0	1	0	64	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054310	Obox1	ENSMUST00000172463	ENSMUSP00000133504	TRANSLATION	protein_coding	-	CCDS20837.1	3	204	0	1	0.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054310	Obox1	ENSMUST00000067288	ENSMUSP00000067691	TRANSLATION	protein_coding	-	CCDS20837.1	1	204	0	1	0.5	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073946	Olfr617	ENSMUST00000048265	ENSMUSP00000040319	TRANSLATION	protein_coding	-	CCDS21579.1	-	318	0	0.36	2.7	361.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073946	Olfr617	ENSMUST00000215755	ENSMUSP00000150982	TRANSLATION	protein_coding	-	CCDS21579.1	5	318	0	0.36	2.7	361.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073946	Olfr617	ENSMUST00000216516	ENSMUSP00000149045	TRANSLATION	protein_coding	-	CCDS21579.1	5	318	0	0.36	2.7	361.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000011154	Cfap161	ENSMUST00000208785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011154	Cfap161	ENSMUST00000011298	ENSMUSP00000011298	TRANSLATION	protein_coding	-	CCDS21413.1	1	303	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000011154	Cfap161	ENSMUST00000149671	ENSMUSP00000115281	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000011154	Cfap161	ENSMUST00000119134	ENSMUSP00000114051	TRANSLATION	protein_coding	-	-	1	257	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000008384	Sertad1	ENSMUST00000135881	ENSMUSP00000119180	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	55.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008384	Sertad1	ENSMUST00000008528	ENSMUSP00000008528	TRANSLATION	protein_coding	-	CCDS21022.1	1	236	0	0	6.3	55.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000030760	Acer3	ENSMUST00000033020	ENSMUSP00000033020	TRANSLATION	protein_coding	-	CCDS21468.1	1	267	0	0	15	264.4	9	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000030760	Acer3	ENSMUST00000151258	ENSMUSP00000116127	TRANSLATION	nonsense_mediated_decay	-	-	5	174	0	0	0	186.1	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000030760	Acer3	ENSMUST00000206182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030760	Acer3	ENSMUST00000137899	ENSMUSP00000120334	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	0	0	121.1	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000030760	Acer3	ENSMUST00000120520	ENSMUSP00000112884	TRANSLATION	protein_coding	-	-	1	225	0	0	3.6	190.9	8	-4,-7	-	-	2.334	MINOR
ENSMUSG00000030483	Cyp2b10	ENSMUST00000072438	ENSMUSP00000072264	TRANSLATION	protein_coding	-	CCDS20999.1	1	491	33	9	1.5	507.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030483	Cyp2b10	ENSMUST00000005477	ENSMUSP00000005477	TRANSLATION	protein_coding	-	-	1	500	33	8.835	0	492.1	0	3,-2	-	-	16.722	MINOR
ENSMUSG00000030483	Cyp2b10	ENSMUST00000144140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182484	ENSMUSP00000138714	TRANSLATION	protein_coding	-	-	5	726	0	0	0	315.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183275	ENSMUSP00000138381	TRANSLATION	protein_coding	stop	-	5	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030583	Sipa1l3	ENSMUST00000181975	ENSMUSP00000138592	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183330	ENSMUSP00000138345	TRANSLATION	protein_coding	start	-	5	849	0	0	0	315.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030583	Sipa1l3	ENSMUST00000085809	ENSMUSP00000082965	TRANSLATION	protein_coding	-	CCDS39871.1	5	1776	0	3.92	1.5	538.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182780	ENSMUSP00000138311	TRANSLATION	protein_coding	start	-	5	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030583	Sipa1l3	ENSMUST00000183096	ENSMUSP00000138171	TRANSLATION	protein_coding	-	CCDS39871.1	5	1776	0	3.92	1.5	538.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030583	Sipa1l3	ENSMUST00000182829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063713	Klk1b24	ENSMUST00000073713	ENSMUSP00000073392	TRANSLATION	protein_coding	-	CCDS21198.1	1	263	7	4.3	0.5	238.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056383	AI987944	ENSMUST00000206430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056383	AI987944	ENSMUST00000206801	ENSMUSP00000145565	TRANSLATION	protein_coding	-	-	1	167	7	2.4	0	98.5	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000056383	AI987944	ENSMUST00000205338	ENSMUSP00000145621	TRANSLATION	protein_coding	-	CCDS85272.1	1	403	42	3.4	0.5	282.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000056383	AI987944	ENSMUST00000071804	ENSMUSP00000071708	TRANSLATION	protein_coding	-	CCDS39920.1	1	406	42	3.4	0.5	282.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000056946	Olfr512	ENSMUST00000209620	ENSMUSP00000147972	TRANSLATION	protein_coding	-	-	-	314	0	0.42	7.5	207.8	9	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000056946	Olfr512	ENSMUST00000074730	ENSMUSP00000074291	TRANSLATION	protein_coding	-	CCDS21725.1	-	326	0	0.42	1.5	207.8	9	-4,-1	-	-	12.231	MINOR
ENSMUSG00000038745	Nlrp6	ENSMUST00000183845	ENSMUSP00000139357	TRANSLATION	protein_coding	-	CCDS40178.2	1	869	6	4.48	0.5	210.6	1	-4,-5	-	-	17.922	PRINCIPAL:2
ENSMUSG00000038745	Nlrp6	ENSMUST00000183761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038745	Nlrp6	ENSMUST00000106045	ENSMUSP00000101660	TRANSLATION	protein_coding	-	-	5	882	6	4.52	0	210.6	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038745	Nlrp6	ENSMUST00000184560	ENSMUSP00000139170	TRANSLATION	protein_coding	-	-	1	899	6	4.48	0.5	210.6	1	-4,-6	-	-	17.922	ALTERNATIVE:2
ENSMUSG00000059874	Olfr603	ENSMUST00000218246	ENSMUSP00000151321	TRANSLATION	protein_coding	-	CCDS21571.1	5	312	0	0.36	6.4	400.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059874	Olfr603	ENSMUST00000071844	ENSMUSP00000071744	TRANSLATION	protein_coding	-	CCDS21571.1	-	312	0	0.36	6.4	400.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062040	Zfp27	ENSMUST00000172448	ENSMUSP00000127677	TRANSLATION	protein_coding	-	CCDS21076.1	3	819	84	0.2	0.5	512.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062040	Zfp27	ENSMUST00000161904	ENSMUSP00000124684	TRANSLATION	protein_coding	-	CCDS21076.1	1	819	84	0.2	0.5	512.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062040	Zfp27	ENSMUST00000160411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062040	Zfp27	ENSMUST00000162592	ENSMUSP00000123953	TRANSLATION	protein_coding	-	CCDS21076.1	1	819	84	0.2	0.5	512.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062040	Zfp27	ENSMUST00000159920	ENSMUSP00000125232	TRANSLATION	protein_coding	-	CCDS21076.1	5	819	84	0.2	0.5	512.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062040	Zfp27	ENSMUST00000053521	ENSMUSP00000054012	TRANSLATION	protein_coding	-	CCDS21076.1	1	819	84	0.2	0.5	512.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002984	Tomm40	ENSMUST00000174476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002984	Tomm40	ENSMUST00000032555	ENSMUSP00000032555	TRANSLATION	protein_coding	-	CCDS52062.1	1	361	0	0	5.1	262.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000002984	Tomm40	ENSMUST00000093552	ENSMUSP00000104090	TRANSLATION	protein_coding	-	CCDS52062.1	1	361	0	0	5.1	262.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000002984	Tomm40	ENSMUST00000173966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002984	Tomm40	ENSMUST00000208286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002984	Tomm40	ENSMUST00000172705	ENSMUSP00000133975	TRANSLATION	protein_coding	start	-	2	73	0	0	0	57.9	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000025507	Pidd1	ENSMUST00000131980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025507	Pidd1	ENSMUST00000147268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025507	Pidd1	ENSMUST00000026580	ENSMUSP00000026580	TRANSLATION	protein_coding	-	CCDS22014.1	5	915	0	7.66	1.5	246.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025507	Pidd1	ENSMUST00000190068	ENSMUSP00000139957	TRANSLATION	nonsense_mediated_decay	-	-	1	244	0	1.04	0	62.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025507	Pidd1	ENSMUST00000106005	ENSMUSP00000101627	TRANSLATION	protein_coding	-	CCDS22014.1	1	915	0	7.66	1.5	246.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025507	Pidd1	ENSMUST00000138065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025507	Pidd1	ENSMUST00000131621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025507	Pidd1	ENSMUST00000190882	ENSMUSP00000139785	TRANSLATION	nonsense_mediated_decay	-	-	1	244	0	1.04	0	62.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025507	Pidd1	ENSMUST00000128703	ENSMUSP00000139487	TRANSLATION	nonsense_mediated_decay	-	-	1	379	0	2.64	0	71.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025507	Pidd1	ENSMUST00000130878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025507	Pidd1	ENSMUST00000154949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025507	Pidd1	ENSMUST00000190303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034087	Nlrp4b	ENSMUST00000211069	ENSMUSP00000148004	TRANSLATION	protein_coding	start	-	3	228	0	3.88	0	40	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034087	Nlrp4b	ENSMUST00000132990	ENSMUSP00000115831	TRANSLATION	protein_coding	start	-	1	466	1	4.27	0	40	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034087	Nlrp4b	ENSMUST00000047809	ENSMUSP00000043881	TRANSLATION	protein_coding	-	CCDS20795.1	1	863	6	6.08	0.5	238.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034087	Nlrp4b	ENSMUST00000211258	ENSMUSP00000148162	TRANSLATION	protein_coding	start	-	3	155	0	3.08	0	40	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034087	Nlrp4b	ENSMUST00000117413	ENSMUSP00000113095	TRANSLATION	protein_coding	-	CCDS20795.1	1	863	6	6.08	0.5	238.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070604	Vsig10l	ENSMUST00000107977	ENSMUSP00000103611	TRANSLATION	protein_coding	-	-	5	868	0	2.4	0.5	57.1	1	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000070604	Vsig10l	ENSMUST00000203769	ENSMUSP00000144692	TRANSLATION	protein_coding	-	CCDS85281.1	1	766	0	2.4	0.5	57.1	1	-2,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000070604	Vsig10l	ENSMUST00000205247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070604	Vsig10l	ENSMUST00000203042	ENSMUSP00000145378	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070604	Vsig10l	ENSMUST00000203152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002083	Bbc3	ENSMUST00000002152	ENSMUSP00000002152	TRANSLATION	protein_coding	-	CCDS20847.1	1	193	0	0	7.5	310.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000002083	Bbc3	ENSMUST00000136781	ENSMUSP00000119225	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	165.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002083	Bbc3	ENSMUST00000147267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002083	Bbc3	ENSMUST00000209688	ENSMUSP00000147422	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	124.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002409	Dyrk1b	ENSMUST00000085901	ENSMUSP00000083064	TRANSLATION	protein_coding	-	CCDS21037.1	1	629	19	6.8	7.5	169.3	0	-4,-7	-	-	20.742	PRINCIPAL:1
ENSMUSG00000002409	Dyrk1b	ENSMUST00000172467	ENSMUSP00000133431	TRANSLATION	protein_coding	-	CCDS85251.1	1	689	19	6.8	3.9	169.3	0	-4,-2	-	-	19.08	MINOR
ENSMUSG00000002409	Dyrk1b	ENSMUST00000172761	ENSMUSP00000133719	TRANSLATION	protein_coding	-	CCDS57532.1	1	589	19	5.8	6.3	173.6	0	-4,-7	-	-	18.447	MINOR
ENSMUSG00000006311	Etv2	ENSMUST00000108147	ENSMUSP00000103782	TRANSLATION	protein_coding	-	CCDS39888.1	1	335	0	2	1.5	108.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096073	Vmn1r166	ENSMUST00000164045	ENSMUSP00000126882	TRANSLATION	protein_coding	-	CCDS52128.1	-	306	0	0	1.5	56.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074375	Sult2a3	ENSMUST00000098809	ENSMUSP00000096407	TRANSLATION	protein_coding	-	CCDS57495.1	5	285	20	6	0.5	271.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030551	Nr2f2	ENSMUST00000089565	ENSMUSP00000086993	TRANSLATION	protein_coding	-	CCDS21358.1	1	281	0	2	11.7	136.3	0	-4,-5	-	-	7.63	MINOR
ENSMUSG00000030551	Nr2f2	ENSMUST00000032768	ENSMUSP00000032768	TRANSLATION	protein_coding	-	CCDS21359.1	1	414	8	3	12.8	244.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030551	Nr2f2	ENSMUST00000208474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030551	Nr2f2	ENSMUST00000207153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030551	Nr2f2	ENSMUST00000208081	ENSMUSP00000147190	TRANSLATION	protein_coding	stop	-	2	170	0	1	0	80.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030551	Nr2f2	ENSMUST00000208681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037552	Plekhg2	ENSMUST00000094644	ENSMUSP00000092228	TRANSLATION	protein_coding	-	CCDS21040.2	1	1341	0	6.52	0.5	170.9	0	-4,-5	-	-	11.7	PRINCIPAL:3
ENSMUSG00000037552	Plekhg2	ENSMUST00000147767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037552	Plekhg2	ENSMUST00000129145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037552	Plekhg2	ENSMUST00000144700	ENSMUSP00000115651	TRANSLATION	protein_coding	stop	-	1	912	0	6.67	0	170.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037552	Plekhg2	ENSMUST00000152281	ENSMUSP00000117062	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037552	Plekhg2	ENSMUST00000147362	ENSMUSP00000118217	TRANSLATION	protein_coding	stop	-	3	205	0	2.8	0	82.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037552	Plekhg2	ENSMUST00000128015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037552	Plekhg2	ENSMUST00000147887	ENSMUSP00000122050	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037552	Plekhg2	ENSMUST00000119990	ENSMUSP00000112881	TRANSLATION	protein_coding	-	CCDS52162.1	1	1340	0	6.67	0.5	170.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000037552	Plekhg2	ENSMUST00000121085	ENSMUSP00000113449	TRANSLATION	protein_coding	-	-	2	1365	0	6.67	0.5	170.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000095358	Vmn1r165	ENSMUST00000179594	ENSMUSP00000136625	TRANSLATION	protein_coding	-	CCDS52127.1	-	307	0	0	1.5	55.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061079	Zfp143	ENSMUST00000211798	ENSMUSP00000148235	TRANSLATION	protein_coding	-	CCDS57580.1	1	637	28	4.15	14.8	116.7	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000061079	Zfp143	ENSMUST00000169638	ENSMUSP00000126015	TRANSLATION	protein_coding	-	-	1	610	28	4.15	0	116.7	0	-4,-5	-	-	18	MINOR
ENSMUSG00000061079	Zfp143	ENSMUST00000209505	ENSMUSP00000147673	TRANSLATION	protein_coding	-	CCDS57580.1	1	637	28	4.15	14.8	116.7	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000061079	Zfp143	ENSMUST00000209252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061079	Zfp143	ENSMUST00000084727	ENSMUSP00000081778	TRANSLATION	protein_coding	-	-	1	638	28	4.15	14.8	116.7	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000036427	Gpi1	ENSMUST00000206603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036427	Gpi1	ENSMUST00000126901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036427	Gpi1	ENSMUST00000138773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036427	Gpi1	ENSMUST00000205800	ENSMUSP00000146209	TRANSLATION	protein_coding	start	-	5	191	2	5.08	0	269.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036427	Gpi1	ENSMUST00000206232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036427	Gpi1	ENSMUST00000135243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036427	Gpi1	ENSMUST00000205983	ENSMUSP00000146273	TRANSLATION	nonsense_mediated_decay	-	-	5	130	0	3.63	0	69.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036427	Gpi1	ENSMUST00000038027	ENSMUSP00000049355	TRANSLATION	protein_coding	-	CCDS21138.1	1	558	15	16.41	1.5	876.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000036427	Gpi1	ENSMUST00000205865	ENSMUSP00000145839	TRANSLATION	nonsense_mediated_decay	start	-	5	34	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036427	Gpi1	ENSMUST00000206415	ENSMUSP00000145891	TRANSLATION	protein_coding	stop	-	5	152	0	4.58	0	65.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036427	Gpi1	ENSMUST00000205870	ENSMUSP00000145929	TRANSLATION	nonsense_mediated_decay	start	-	3	83	0	1.56	0	49.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004473	Clec11a	ENSMUST00000004587	ENSMUSP00000004587	TRANSLATION	protein_coding	-	CCDS21203.1	1	328	10	0.96	1.5	48	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036751	Cox6b1	ENSMUST00000208352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036751	Cox6b1	ENSMUST00000208838	ENSMUSP00000146959	TRANSLATION	protein_coding	-	-	3	43	0	1.25	0	31.5	0	-4,-5	-	-	5.766	MINOR
ENSMUSG00000036751	Cox6b1	ENSMUST00000207851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036751	Cox6b1	ENSMUST00000075738	ENSMUSP00000075150	TRANSLATION	protein_coding	-	CCDS39887.1	1	86	0	2.58	15.3	66.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043795	Prr33	ENSMUST00000238347	ENSMUSP00000158581	TRANSLATION	protein_coding	-	-	-	440	0	0	1	346.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043795	Prr33	ENSMUST00000054910	ENSMUSP00000158722	TRANSLATION	protein_coding	-	-	1	82	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000043795	Prr33	ENSMUST00000151580	ENSMUSP00000158741	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052605	Isoc2b	ENSMUST00000207699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052605	Isoc2b	ENSMUST00000208816	ENSMUSP00000147085	TRANSLATION	protein_coding	-	CCDS20748.1	3	210	0	3.85	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052605	Isoc2b	ENSMUST00000064547	ENSMUSP00000066859	TRANSLATION	protein_coding	-	CCDS20748.1	1	210	0	3.85	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052605	Isoc2b	ENSMUST00000207502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052605	Isoc2b	ENSMUST00000208173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045584	Olfr610	ENSMUST00000063109	ENSMUSP00000052577	TRANSLATION	protein_coding	-	CCDS21577.1	-	315	0	0.42	4	351.2	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000045584	Olfr610	ENSMUST00000217627	ENSMUSP00000150921	TRANSLATION	protein_coding	-	CCDS21577.1	5	315	0	0.42	4	351.2	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000045584	Olfr610	ENSMUST00000213422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060105	Olfr504	ENSMUST00000075595	ENSMUSP00000075025	TRANSLATION	protein_coding	-	CCDS21719.1	-	318	0	0	2.7	234.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057342	Sphk2	ENSMUST00000107737	ENSMUSP00000103366	TRANSLATION	protein_coding	-	CCDS21261.1	1	617	13	3.56	1.5	95	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057342	Sphk2	ENSMUST00000211340	ENSMUSP00000147787	TRANSLATION	protein_coding	start/stop	-	5	131	9	2.16	0	62.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057342	Sphk2	ENSMUST00000210060	ENSMUSP00000147391	TRANSLATION	protein_coding	-	CCDS21261.1	1	617	13	3.56	1.5	95	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057342	Sphk2	ENSMUST00000072836	ENSMUSP00000072615	TRANSLATION	protein_coding	-	CCDS21261.1	1	617	13	3.56	1.5	95	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000109806	Olfr663	ENSMUST00000209914	ENSMUSP00000147953	TRANSLATION	polymorphic_pseudogene	stop	-	-	319	0	0.2	0	226.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000044737	Klk14	ENSMUST00000056329	ENSMUSP00000056935	TRANSLATION	protein_coding	-	CCDS21180.1	1	250	12	4.3	2.9	243.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030986	Dhx32	ENSMUST00000106139	ENSMUSP00000101745	TRANSLATION	protein_coding	-	CCDS72060.1	1	611	0	7.41	1.7	120.4	0	-4,-5	-	-	8.772	MINOR
ENSMUSG00000030986	Dhx32	ENSMUST00000211450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030986	Dhx32	ENSMUST00000149876	ENSMUSP00000121789	TRANSLATION	protein_coding	stop	-	2	143	13	1.85	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030986	Dhx32	ENSMUST00000136301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030986	Dhx32	ENSMUST00000135989	ENSMUSP00000118326	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030986	Dhx32	ENSMUST00000063669	ENSMUSP00000066067	TRANSLATION	protein_coding	-	CCDS21936.1	1	751	13	9.024	1.5	120.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030986	Dhx32	ENSMUST00000033290	ENSMUSP00000033290	TRANSLATION	protein_coding	-	CCDS21936.1	1	751	13	9.024	1.5	120.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030986	Dhx32	ENSMUST00000130182	ENSMUSP00000115677	TRANSLATION	protein_coding	stop	-	3	110	12	0.864	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030986	Dhx32	ENSMUST00000146211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030986	Dhx32	ENSMUST00000140593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037337	Map4k1	ENSMUST00000085835	ENSMUSP00000082995	TRANSLATION	protein_coding	-	CCDS39865.1	1	827	19	10.08	1.5	375.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037337	Map4k1	ENSMUST00000208784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037337	Map4k1	ENSMUST00000207185	ENSMUSP00000147189	TRANSLATION	nonsense_mediated_decay	-	-	1	641	19	10.08	0	267.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037337	Map4k1	ENSMUST00000208227	ENSMUSP00000146807	TRANSLATION	protein_coding	-	-	1	750	10	8.58	0.5	332.9	0	-4,-5	-	-	6.444	MINOR
ENSMUSG00000030748	Il4ra	ENSMUST00000206846	ENSMUSP00000145824	TRANSLATION	nonsense_mediated_decay	-	-	1	230	3	4.75	0	126.2	0	1,-4	-	-	-1	MINOR
ENSMUSG00000030748	Il4ra	ENSMUST00000205985	ENSMUSP00000145725	TRANSLATION	protein_coding	stop	-	3	140	0	2.75	0	126.2	0	1,-4	-	-	-1	MINOR
ENSMUSG00000030748	Il4ra	ENSMUST00000206681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030748	Il4ra	ENSMUST00000206217	ENSMUSP00000146185	TRANSLATION	protein_coding	stop	-	2	42	0	0.65	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000030748	Il4ra	ENSMUST00000033004	ENSMUSP00000033004	TRANSLATION	protein_coding	-	CCDS40121.1	1	810	3	4.75	0.5	126.2	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000042828	Trim72	ENSMUST00000106248	ENSMUSP00000101855	TRANSLATION	protein_coding	-	CCDS40148.1	5	477	16	2.8	5.1	152.7	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042828	Trim72	ENSMUST00000081042	ENSMUSP00000079832	TRANSLATION	protein_coding	-	CCDS40148.1	1	477	16	2.8	5.1	152.7	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000051885	Olfr664	ENSMUST00000211596	ENSMUSP00000147645	TRANSLATION	protein_coding	start	-	-	306	0	0	0	325.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000051885	Olfr664	ENSMUST00000072887	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000030826	Bcat2	ENSMUST00000209204	ENSMUSP00000148152	TRANSLATION	protein_coding	-	CCDS57549.1	1	353	18	8	5.3	0	0	-4,-6	-	-	12.606	MINOR
ENSMUSG00000030826	Bcat2	ENSMUST00000033098	ENSMUSP00000033098	TRANSLATION	protein_coding	-	CCDS21252.1	1	393	18	8.69	7.5	0	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000030826	Bcat2	ENSMUST00000209569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030826	Bcat2	ENSMUST00000210811	ENSMUSP00000148059	TRANSLATION	protein_coding	stop	-	3	97	2	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030826	Bcat2	ENSMUST00000209410	ENSMUSP00000147303	TRANSLATION	nonsense_mediated_decay	start	-	5	101	8	2	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000030826	Bcat2	ENSMUST00000120864	ENSMUSP00000113045	TRANSLATION	protein_coding	-	-	5	388	18	8.69	1	0	0	-3,-1	-	-	12	MINOR
ENSMUSG00000030826	Bcat2	ENSMUST00000209543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030826	Bcat2	ENSMUST00000211173	ENSMUSP00000147628	TRANSLATION	protein_coding	-	CCDS57549.1	1	353	18	8	5.3	0	0	-4,-6	-	-	12.606	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000190115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030556	Lrrc28	ENSMUST00000185818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030556	Lrrc28	ENSMUST00000053950	ENSMUSP00000052177	TRANSLATION	protein_coding	-	CCDS21351.1	1	367	0	6.064	10.8	75.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030556	Lrrc28	ENSMUST00000032775	ENSMUSP00000032775	TRANSLATION	protein_coding	-	CCDS52269.1	1	154	0	3.384	0.5	56	0	-4,-5	-	-	5.088	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000191035	ENSMUSP00000140382	TRANSLATION	nonsense_mediated_decay	-	-	3	151	0	3.219	0	31.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000191062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030556	Lrrc28	ENSMUST00000190770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030556	Lrrc28	ENSMUST00000191386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030556	Lrrc28	ENSMUST00000189836	ENSMUSP00000139606	TRANSLATION	protein_coding	stop	-	2	114	0	2.2926	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000187953	ENSMUSP00000140207	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000190276	ENSMUSP00000140972	TRANSLATION	protein_coding	stop	-	3	159	0	3.704	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030556	Lrrc28	ENSMUST00000188971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099481	Xndc1	ENSMUST00000094130	ENSMUSP00000091680	TRANSLATION	protein_coding	-	CCDS72002.1	1	405	8	2.74	1.5	181.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000099481	Xndc1	ENSMUST00000140395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099481	Xndc1	ENSMUST00000142629	ENSMUSP00000121475	TRANSLATION	nonsense_mediated_decay,RT	start	-	1	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099481	Xndc1	ENSMUST00000125197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099481	Xndc1	ENSMUST00000143839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099481	Xndc1	ENSMUST00000146450	ENSMUSP00000117300	TRANSLATION	protein_coding	stop	-	3	158	0	2.74	0	181.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000099481	Xndc1	ENSMUST00000106950	ENSMUSP00000102563	TRANSLATION	protein_coding,RT	-	CCDS72002.1	1	405	8	2.74	1.5	181.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000099481	Xndc1	ENSMUST00000153176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099481	Xndc1	ENSMUST00000141646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048170	Mcmbp	ENSMUST00000127807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048170	Mcmbp	ENSMUST00000140714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048170	Mcmbp	ENSMUST00000119081	ENSMUSP00000113961	TRANSLATION	protein_coding	-	-	1	660	0	0	0	687.9	0	-4,-6	-	-	0.324	MINOR
ENSMUSG00000048170	Mcmbp	ENSMUST00000057557	ENSMUSP00000062843	TRANSLATION	protein_coding	-	CCDS40153.1	1	642	0	0	8.8	782.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000048170	Mcmbp	ENSMUST00000146352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053522	Lgals7	ENSMUST00000138272	ENSMUSP00000123110	TRANSLATION	protein_coding	stop	-	3	86	8	2	0	75.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053522	Lgals7	ENSMUST00000081457	ENSMUSP00000080179	TRANSLATION	protein_coding	-	CCDS21060.1	1	136	8	3.5	3.9	130.4	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000053522	Lgals7	ENSMUST00000128001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078759	Scgb1b7	ENSMUST00000108097	ENSMUSP00000103732	TRANSLATION	protein_coding	-	CCDS57537.1	1	93	0	1.78	0.5	72.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044786	Zfp36	ENSMUST00000209061	ENSMUSP00000146830	TRANSLATION	protein_coding	-	-	-	307	8	0.6	0	80.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000044786	Zfp36	ENSMUST00000051241	ENSMUSP00000057815	TRANSLATION	protein_coding	-	CCDS21041.1	1	319	8	0.6	0.5	80.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030861	Acadsb	ENSMUST00000136612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030861	Acadsb	ENSMUST00000133277	ENSMUSP00000146461	TRANSLATION	protein_coding	start	-	2	163	0	2.6	0	99.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030861	Acadsb	ENSMUST00000135633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030861	Acadsb	ENSMUST00000117518	ENSMUSP00000113948	TRANSLATION	protein_coding	-	-	1	465	38	8.68	0	328	0	-4,0	-	-	13.584	MINOR
ENSMUSG00000030861	Acadsb	ENSMUST00000015829	ENSMUSP00000015829	TRANSLATION	protein_coding	-	CCDS21916.1	1	432	40	9.35	2.7	357.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000030861	Acadsb	ENSMUST00000151995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030861	Acadsb	ENSMUST00000156261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054716	Zfp771	ENSMUST00000151893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054716	Zfp771	ENSMUST00000205583	ENSMUSP00000145541	TRANSLATION	protein_coding	stop	-	2	18	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054716	Zfp771	ENSMUST00000052509	ENSMUSP00000056959	TRANSLATION	protein_coding	-	CCDS21861.1	1	317	32	1.2	7.5	192.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000110136	Gm45785	ENSMUST00000209690	ENSMUSP00000148146	TRANSLATION	protein_coding,RT	-	-	5	94	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036578	Fxyd7	ENSMUST00000073892	ENSMUSP00000073555	TRANSLATION	protein_coding	-	CCDS21122.1	1	80	0	1.278	3.9	73.3	1	-4,-6	-	-	12.982	PRINCIPAL:2
ENSMUSG00000036578	Fxyd7	ENSMUST00000206341	ENSMUSP00000146171	TRANSLATION	protein_coding	-	-	1	77	0	1.278	3.9	73.5	1	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000073926	Olfr653	ENSMUST00000217466	ENSMUSP00000149192	TRANSLATION	protein_coding	-	CCDS21619.1	5	317	0	0.16	5.1	368.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073926	Olfr653	ENSMUST00000098174	ENSMUSP00000095776	TRANSLATION	protein_coding	-	CCDS21619.1	-	317	0	0.16	5.1	368.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073926	Olfr653	ENSMUST00000215585	ENSMUSP00000149455	TRANSLATION	protein_coding	-	CCDS21619.1	5	317	0	0.16	5.1	368.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000005547	Cyp2a5	ENSMUST00000169007	ENSMUSP00000128865	TRANSLATION	protein_coding	start	-	5	128	6	2.83	0	156.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005547	Cyp2a5	ENSMUST00000170631	ENSMUSP00000127829	TRANSLATION	protein_coding	start	-	5	72	5	1.08	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005547	Cyp2a5	ENSMUST00000005685	ENSMUSP00000005685	TRANSLATION	protein_coding	-	CCDS21008.1	1	494	31	11.08	3.9	498.7	1	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000005547	Cyp2a5	ENSMUST00000168869	ENSMUSP00000130640	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	1	0	0	1	1,-3	-	-	-1	MINOR
ENSMUSG00000005547	Cyp2a5	ENSMUST00000165641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030780	BC017158	ENSMUST00000137677	ENSMUSP00000117520	TRANSLATION	protein_coding	start	-	3	83	0	0	0	64.3	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000030780	BC017158	ENSMUST00000139452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030780	BC017158	ENSMUST00000154003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030780	BC017158	ENSMUST00000126263	ENSMUSP00000114673	TRANSLATION	nonsense_mediated_decay	-	-	1	347	0	0	0	314.1	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000030780	BC017158	ENSMUST00000155177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030780	BC017158	ENSMUST00000033044	ENSMUSP00000033044	TRANSLATION	protein_coding	-	CCDS21895.1	1	466	0	0	3.9	314.1	4	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000030780	BC017158	ENSMUST00000147091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030780	BC017158	ENSMUST00000124216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073804	Nps	ENSMUST00000210697	ENSMUSP00000147505	TRANSLATION	protein_coding	-	-	5	72	0	0	0	126.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000073804	Nps	ENSMUST00000210907	ENSMUSP00000147336	TRANSLATION	protein_coding	-	-	5	72	0	0	0	126.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000073804	Nps	ENSMUST00000097983	ENSMUSP00000095597	TRANSLATION	protein_coding	-	CCDS52420.1	5	89	0	0	3.9	126.3	0	3,-1	-	-	7	PRINCIPAL:2
ENSMUSG00000030981	Mmp21	ENSMUST00000131894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030981	Mmp21	ENSMUST00000122136	ENSMUSP00000113853	TRANSLATION	protein_coding	-	CCDS85442.1	1	415	17	1.86	0.5	201.4	0	1,-2	-	-	11.4	MINOR
ENSMUSG00000030981	Mmp21	ENSMUST00000033278	ENSMUSP00000033278	TRANSLATION	protein_coding	-	CCDS21933.1	1	568	19	2.48	1.5	264.2	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030798	Cd37	ENSMUST00000210372	ENSMUSP00000148047	TRANSLATION	protein_coding	-	-	1	60	0	1.11	0	0	3	-2,-5	-	-	2.604	MINOR
ENSMUSG00000030798	Cd37	ENSMUST00000098461	ENSMUSP00000096061	TRANSLATION	protein_coding	-	CCDS21237.1	1	281	0	2.56	2.7	177.3	12	-2,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000030798	Cd37	ENSMUST00000210226	ENSMUSP00000148065	TRANSLATION	nonsense_mediated_decay	start	-	5	61	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000030798	Cd37	ENSMUST00000211373	ENSMUSP00000148136	TRANSLATION	protein_coding	-	-	1	258	0	2.56	0	168.4	10	-2,-5	-	-	11.466	ALTERNATIVE:2
ENSMUSG00000030798	Cd37	ENSMUST00000209677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030798	Cd37	ENSMUST00000033063	ENSMUSP00000033063	TRANSLATION	protein_coding	-	CCDS71958.1	1	303	0	2.56	1.5	177.3	12	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030798	Cd37	ENSMUST00000209779	ENSMUSP00000147416	TRANSLATION	protein_coding	-	-	1	252	0	2.56	0	140.7	9	-2,-5	-	-	9.804	MINOR
ENSMUSG00000030798	Cd37	ENSMUST00000210078	ENSMUSP00000147818	TRANSLATION	protein_coding	stop	-	5	235	0	1.81	0	131.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000030798	Cd37	ENSMUST00000210000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060441	Trim5	ENSMUST00000051795	ENSMUSP00000050084	TRANSLATION	protein_coding	-	-	5	488	16	5.228	0	119.2	0	-4,-5	-	-	17.694	ALTERNATIVE:2
ENSMUSG00000060441	Trim5	ENSMUST00000098179	ENSMUSP00000095781	TRANSLATION	protein_coding	-	CCDS80770.1	1	497	16	5.3798	0.5	117.1	0	-4,-5	-	-	17.874	PRINCIPAL:2
ENSMUSG00000073924	Olfr656	ENSMUST00000215575	ENSMUSP00000149625	TRANSLATION	protein_coding	-	-	3	321	0	0.24	2.5	349.4	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000073924	Olfr656	ENSMUST00000098172	ENSMUSP00000095774	TRANSLATION	protein_coding	-	CCDS21622.1	-	329	0	0.24	2.7	349.4	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000095914	Vmn2r48	ENSMUST00000165611	ENSMUSP00000130631	TRANSLATION	protein_coding	-	CCDS52006.1	5	855	0	2.92	1.5	385.5	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040125	Gpr26	ENSMUST00000045840	ENSMUSP00000041664	TRANSLATION	protein_coding	-	CCDS21920.1	1	337	0	1.68	9.5	112.7	0	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039728	Slc6a5	ENSMUST00000209172	ENSMUSP00000146430	TRANSLATION	nonsense_mediated_decay	-	-	1	181	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039728	Slc6a5	ENSMUST00000107605	ENSMUSP00000103230	TRANSLATION	protein_coding	-	CCDS21308.1	1	791	0	11.23	1.5	718.9	9	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039728	Slc6a5	ENSMUST00000207753	ENSMUSP00000146917	TRANSLATION	protein_coding	-	CCDS21308.1	1	791	0	11.23	1.5	718.9	9	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039728	Slc6a5	ENSMUST00000056442	ENSMUSP00000058699	TRANSLATION	protein_coding	-	CCDS21308.1	1	791	0	11.23	1.5	718.9	9	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056144	Trim34a	ENSMUST00000106848	ENSMUSP00000102461	TRANSLATION	protein_coding	-	CCDS52342.1	1	485	16	4.994	1.5	100.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056144	Trim34a	ENSMUST00000106849	ENSMUSP00000102462	TRANSLATION	protein_coding	-	CCDS52342.1	1	485	16	4.994	1.5	100.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056144	Trim34a	ENSMUST00000060315	ENSMUSP00000055058	TRANSLATION	protein_coding	-	CCDS52342.1	1	485	16	4.994	1.5	100.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000013083	2200002J24Rik	ENSMUST00000207260	-	NO_TRANSLATION	lincRNA
ENSMUSG00000013083	2200002J24Rik	ENSMUST00000207565	-	NO_TRANSLATION	lincRNA
ENSMUSG00000013083	2200002J24Rik	ENSMUST00000013227	ENSMUSP00000013227	TRANSLATION	protein_coding	-	CCDS21107.1	3	110	0	0	0.5	56.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000013083	2200002J24Rik	ENSMUST00000207437	-	NO_TRANSLATION	lincRNA
ENSMUSG00000041117	Ccdc8	ENSMUST00000094805	ENSMUSP00000092399	TRANSLATION	protein_coding	-	CCDS52044.1	-	685	0	0	0.5	59.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096663	Vmn1r103	ENSMUST00000163461	ENSMUSP00000128293	TRANSLATION	protein_coding	-	CCDS52075.1	-	305	0	0	1.5	55.5	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000031027	Stk33	ENSMUST00000121378	ENSMUSP00000112560	TRANSLATION	protein_coding	-	-	1	368	13	7.325	0.5	236.7	0	-4,-5	-	-	12.162	MINOR
ENSMUSG00000031027	Stk33	ENSMUST00000090414	ENSMUSP00000087897	TRANSLATION	protein_coding	-	CCDS52358.1	5	491	18	7.985	0.5	256.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031027	Stk33	ENSMUST00000121748	ENSMUSP00000112515	TRANSLATION	protein_coding	-	CCDS52358.1	5	491	18	7.985	0.5	256.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031027	Stk33	ENSMUST00000141210	ENSMUSP00000147147	TRANSLATION	protein_coding	-	-	3	99	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031027	Stk33	ENSMUST00000106745	ENSMUSP00000102356	TRANSLATION	protein_coding	-	CCDS52358.1	1	491	18	7.985	0.5	256.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095664	Vmn2r67	ENSMUST00000168730	ENSMUSP00000126007	TRANSLATION	protein_coding	-	CCDS52289.1	5	851	4	3.56	0.5	357.7	7	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000095664	Vmn2r67	ENSMUST00000233789	ENSMUSP00000156928	TRANSLATION	nonsense_mediated_decay	-	-	-	234	0	0.96	0	34.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000095664	Vmn2r67	ENSMUST00000232720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095664	Vmn2r67	ENSMUST00000233734	ENSMUSP00000156643	TRANSLATION	protein_coding	-	-	-	830	4	3.26	0	331.4	7	-2,-5	-	-	13.822	MINOR
ENSMUSG00000095664	Vmn2r67	ENSMUST00000233656	ENSMUSP00000156949	TRANSLATION	nonsense_mediated_decay	-	-	-	255	0	1.26	0	61.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000040231	Syngr4	ENSMUST00000120299	ENSMUSP00000113955	TRANSLATION	protein_coding	-	CCDS71968.1	1	136	0	0	0.5	38.6	3	-4,-6	-	-	2.748	MINOR
ENSMUSG00000040231	Syngr4	ENSMUST00000039049	ENSMUSP00000047035	TRANSLATION	protein_coding	-	CCDS39962.1	1	233	0	0	6.3	84.2	4	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000040231	Syngr4	ENSMUST00000211254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070798	Psg25	ENSMUST00000094795	ENSMUSP00000092389	TRANSLATION	protein_coding	-	CCDS20872.1	1	475	0	2.96	0.5	167.4	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000078753	Scgb1b24	ENSMUST00000108087	ENSMUSP00000103722	TRANSLATION	protein_coding	-	CCDS52199.1	1	92	0	1.33	0.5	66.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000013921	Clip3	ENSMUST00000145253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013921	Clip3	ENSMUST00000150892	ENSMUSP00000123164	TRANSLATION	protein_coding	stop	-	2	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013921	Clip3	ENSMUST00000144508	ENSMUSP00000121276	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013921	Clip3	ENSMUST00000126216	ENSMUSP00000123660	TRANSLATION	protein_coding	stop	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013921	Clip3	ENSMUST00000014065	ENSMUSP00000014065	TRANSLATION	protein_coding	-	CCDS39880.1	1	547	0	6.6	7.5	201	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000013921	Clip3	ENSMUST00000132844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013921	Clip3	ENSMUST00000125935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009545	Kcnq1	ENSMUST00000186488	ENSMUSP00000140673	TRANSLATION	protein_coding	stop	-	1	60	2	0.12	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009545	Kcnq1	ENSMUST00000187213	ENSMUSP00000139700	TRANSLATION	protein_coding	stop	-	1	39	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009545	Kcnq1	ENSMUST00000186288	ENSMUSP00000140779	TRANSLATION	protein_coding	stop	-	1	30	0	0.12	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009545	Kcnq1	ENSMUST00000186284	ENSMUSP00000140156	TRANSLATION	protein_coding	stop	-	1	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009545	Kcnq1	ENSMUST00000185383	ENSMUSP00000139548	TRANSLATION	protein_coding	-	-	1	440	0	5.16	0	91.2	5	-4,-2	-	-	0.81	MINOR
ENSMUSG00000009545	Kcnq1	ENSMUST00000009689	ENSMUSP00000009689	TRANSLATION	protein_coding	-	CCDS22039.1	1	668	0	8.31	1.5	177.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009545	Kcnq1	ENSMUST00000186798	ENSMUSP00000139798	TRANSLATION	protein_coding	stop	-	1	49	0	0.12	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000101401	Scgb1b18	ENSMUST00000191255	ENSMUSP00000140824	TRANSLATION	protein_coding	-	-	5	93	0	1.33	0.5	57.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044317	Gpr4	ENSMUST00000060225	ENSMUSP00000061243	TRANSLATION	protein_coding	-	CCDS20893.1	1	365	0	0.6	1.5	131.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030400	Ercc2	ENSMUST00000062831	ENSMUSP00000054380	TRANSLATION	protein_coding	-	CCDS20900.1	1	760	13	20.25	8.8	461.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000030400	Ercc2	ENSMUST00000135693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030400	Ercc2	ENSMUST00000127363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030400	Ercc2	ENSMUST00000108461	ENSMUSP00000104101	TRANSLATION	protein_coding	-	-	1	508	1	13.25	0	299.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030400	Ercc2	ENSMUST00000108460	ENSMUSP00000104100	TRANSLATION	protein_coding	-	-	1	739	13	19.5	0	441.7	0	-4,-6	-	-	15.306	MINOR
ENSMUSG00000030400	Ercc2	ENSMUST00000145039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030400	Ercc2	ENSMUST00000129249	ENSMUSP00000117840	TRANSLATION	protein_coding	start	-	5	684	13	18.25	0	395.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030400	Ercc2	ENSMUST00000129291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030400	Ercc2	ENSMUST00000128167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030400	Ercc2	ENSMUST00000136055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041328	Pcf11	ENSMUST00000208255	ENSMUSP00000146885	TRANSLATION	protein_coding	-	-	-	78	0	0.8	0	0	0	-4,-5	-	-	1.158	MINOR
ENSMUSG00000041328	Pcf11	ENSMUST00000151177	ENSMUSP00000115278	TRANSLATION	protein_coding	start	-	5	1476	8	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041328	Pcf11	ENSMUST00000119954	ENSMUSP00000113717	TRANSLATION	protein_coding	-	CCDS52311.1	1	1553	8	3.22	1.5	28.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041328	Pcf11	ENSMUST00000148539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041328	Pcf11	ENSMUST00000208058	ENSMUSP00000146556	TRANSLATION	protein_coding	-	-	5	78	0	0.8	0	0	0	-4,-5	-	-	1.158	MINOR
ENSMUSG00000070526	Peg12	ENSMUST00000094339	ENSMUSP00000091897	TRANSLATION	protein_coding	-	CCDS21328.1	-	283	0	0.2	0.5	388.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025504	Eps8l2	ENSMUST00000127501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000155729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025504	Eps8l2	ENSMUST00000210251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025504	Eps8l2	ENSMUST00000143633	ENSMUSP00000120726	TRANSLATION	protein_coding	stop	-	5	80	1	1.35	0	25.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025504	Eps8l2	ENSMUST00000146042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000145108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025504	Eps8l2	ENSMUST00000133669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000136736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000210158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000140025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025504	Eps8l2	ENSMUST00000026577	ENSMUSP00000026577	TRANSLATION	protein_coding	-	CCDS22009.1	1	729	2	8.3	1.5	204.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025504	Eps8l2	ENSMUST00000136240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109058	Olfr705	ENSMUST00000213721	ENSMUSP00000149585	TRANSLATION	protein_coding	-	CCDS21676.1	5	316	0	0.42	6.3	155.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000109058	Olfr705	ENSMUST00000216009	ENSMUSP00000150853	TRANSLATION	protein_coding	-	CCDS21676.1	5	316	0	0.42	6.3	155.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000109058	Olfr705	ENSMUST00000060879	ENSMUSP00000050694	TRANSLATION	protein_coding	-	CCDS21676.1	-	316	0	0.42	6.3	155.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025499	Hras	ENSMUST00000026572	ENSMUSP00000026572	TRANSLATION	protein_coding	-	CCDS22003.1	1	189	22	4.41	21.5	197.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025499	Hras	ENSMUST00000097957	ENSMUSP00000095570	TRANSLATION	protein_coding	-	CCDS22003.1	2	189	22	4.41	21.5	197.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025499	Hras	ENSMUST00000134008	ENSMUSP00000147590	TRANSLATION	nonsense_mediated_decay	start	-	5	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025499	Hras	ENSMUST00000124314	ENSMUSP00000147731	TRANSLATION	protein_coding	-	CCDS52439.1	5	188	22	3.33	0.5	181.3	0	-4,-6	-	-	14.874	MINOR
ENSMUSG00000025499	Hras	ENSMUST00000128993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025499	Hras	ENSMUST00000124971	ENSMUSP00000138189	TRANSLATION	nonsense_mediated_decay	-	-	2	119	15	2	0	118.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025499	Hras	ENSMUST00000168550	ENSMUSP00000132110	TRANSLATION	protein_coding	-	CCDS52439.1	5	188	22	3.33	0.5	181.3	0	-4,-6	-	-	14.874	MINOR
ENSMUSG00000069727	Zfp975	ENSMUST00000206356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069727	Zfp975	ENSMUST00000107992	ENSMUSP00000103626	TRANSLATION	protein_coding	-	CCDS39926.1	1	525	56	2.2	0.5	333.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043456	Zfp536	ENSMUST00000176129	ENSMUSP00000135234	TRANSLATION	protein_coding	start	-	1	281	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043456	Zfp536	ENSMUST00000175941	ENSMUSP00000134778	TRANSLATION	protein_coding	-	CCDS21156.1	1	1302	30	1.8	0.5	271.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043456	Zfp536	ENSMUST00000176534	ENSMUSP00000135454	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043456	Zfp536	ENSMUST00000206332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043456	Zfp536	ENSMUST00000176680	ENSMUSP00000135218	TRANSLATION	protein_coding	stop	-	2	163	5	1	0	18.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043456	Zfp536	ENSMUST00000176137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043456	Zfp536	ENSMUST00000056338	ENSMUSP00000058468	TRANSLATION	protein_coding	-	CCDS21156.1	1	1302	30	1.8	0.5	271.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043456	Zfp536	ENSMUST00000176114	ENSMUSP00000135681	TRANSLATION	protein_coding	-	CCDS21156.1	1	1302	30	1.8	0.5	271.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043456	Zfp536	ENSMUST00000176297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043456	Zfp536	ENSMUST00000176205	ENSMUSP00000135068	TRANSLATION	protein_coding	-	CCDS21156.1	1	1302	30	1.8	0.5	271.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043456	Zfp536	ENSMUST00000206763	ENSMUSP00000159087	TRANSLATION	protein_coding	start	-	-	847	11	0.8	0	218.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039043	Arpin	ENSMUST00000048731	ENSMUSP00000049440	TRANSLATION	protein_coding	-	CCDS21390.1	1	226	0	0	7.5	355.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000007783	Cpt1c	ENSMUST00000212217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007783	Cpt1c	ENSMUST00000211862	ENSMUSP00000148366	TRANSLATION	protein_coding	start/stop	-	3	200	3	2.05	0	76.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000007783	Cpt1c	ENSMUST00000212836	ENSMUSP00000148815	TRANSLATION	protein_coding	-	CCDS21221.1	1	798	27	10.66	1.5	644.9	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000007783	Cpt1c	ENSMUST00000063761	ENSMUSP00000069539	TRANSLATION	protein_coding	-	CCDS21221.1	1	798	27	10.66	1.5	644.9	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000007783	Cpt1c	ENSMUST00000212255	ENSMUSP00000148456	TRANSLATION	protein_coding	stop	-	3	112	0	0.93	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000007783	Cpt1c	ENSMUST00000211901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007783	Cpt1c	ENSMUST00000212890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054272	Zscan4c	ENSMUST00000131379	ENSMUSP00000118506	TRANSLATION	protein_coding	-	CCDS52012.1	1	506	15	0.2	0.5	112.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030407	Qpctl	ENSMUST00000032566	ENSMUSP00000032566	TRANSLATION	protein_coding	-	CCDS20891.1	1	383	10	6.2	2.7	162.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030407	Qpctl	ENSMUST00000205979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097972	Scgb2b15	ENSMUST00000182975	ENSMUSP00000138802	TRANSLATION	protein_coding	-	CCDS59727.1	2	82	0	0	0.5	25.1	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000097972	Scgb2b15	ENSMUST00000183050	ENSMUSP00000138205	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000110105	Gm45844	ENSMUST00000209325	ENSMUSP00000147437	TRANSLATION	protein_coding,RT	-	-	1	106	3	1.598	0	53.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110105	Gm45844	ENSMUST00000209833	ENSMUSP00000147490	TRANSLATION	protein_coding,RT	-	-	5	110	2	1.4	0	55.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110105	Gm45844	ENSMUST00000173842	ENSMUSP00000147827	TRANSLATION	protein_coding,RT	-	-	3	104	2	1.4	0	53	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110105	Gm45844	ENSMUST00000210333	ENSMUSP00000147617	TRANSLATION	protein_coding,RT	-	-	1	137	2	1.8	0	53	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000110105	Gm45844	ENSMUST00000209788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030795	Fus	ENSMUST00000172755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000205351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000079045	ENSMUSP00000078054	TRANSLATION	protein_coding	-	-	-	122	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030795	Fus	ENSMUST00000155941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000136289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000137464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030795	Fus	ENSMUST00000205261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000174196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000123151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000154843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030795	Fus	ENSMUST00000174632	ENSMUSP00000133820	TRANSLATION	protein_coding	start/stop	-	5	130	4	1.75	0	80.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030795	Fus	ENSMUST00000141997	ENSMUSP00000134447	TRANSLATION	protein_coding	start	-	2	104	4	0	0	48.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030795	Fus	ENSMUST00000106251	ENSMUSP00000101858	TRANSLATION	protein_coding	-	CCDS21886.1	1	518	4	3.78	1.5	89.8	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000030795	Fus	ENSMUST00000077609	ENSMUSP00000076801	TRANSLATION	protein_coding	-	CCDS85425.1	1	517	4	3.78	1.5	89.8	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000030795	Fus	ENSMUST00000128851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030795	Fus	ENSMUST00000121616	ENSMUSP00000112721	TRANSLATION	protein_coding	-	-	1	280	4	0.7	0	48.8	0	-4,-5	-	-	7.258	MINOR
ENSMUSG00000074291	Vmn1r168	ENSMUST00000098704	ENSMUSP00000096301	TRANSLATION	protein_coding	-	CCDS52131.1	-	309	0	0	0.5	48	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074291	Vmn1r168	ENSMUST00000235361	ENSMUSP00000157979	TRANSLATION	protein_coding	-	-	-	252	0	0	0	45.7	4	0,-4	-	-	5.712	MINOR
ENSMUSG00000074291	Vmn1r168	ENSMUST00000236919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096735	Vmn1r79	ENSMUST00000227530	ENSMUSP00000154092	TRANSLATION	protein_coding	-	CCDS52017.1	-	306	0	0	1.5	117.5	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096735	Vmn1r79	ENSMUST00000226953	ENSMUSP00000154616	TRANSLATION	protein_coding	-	CCDS52017.1	-	306	0	0	1.5	117.5	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096735	Vmn1r79	ENSMUST00000062811	ENSMUSP00000056232	TRANSLATION	protein_coding	-	CCDS52017.1	-	306	0	0	1.5	117.5	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035177	Nlrp2	ENSMUST00000207685	ENSMUSP00000146451	TRANSLATION	nonsense_mediated_decay	start	-	3	87	0	1.75	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035177	Nlrp2	ENSMUST00000045022	ENSMUSP00000045077	TRANSLATION	protein_coding	-	CCDS39746.1	1	1046	5	7.01	1.5	213.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000035177	Nlrp2	ENSMUST00000207520	ENSMUSP00000147102	TRANSLATION	protein_coding	start/stop	-	3	248	0	3.88	0	33.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060260	Pwwp2b	ENSMUST00000093993	ENSMUSP00000091529	TRANSLATION	protein_coding	-	CCDS40169.1	1	509	0	0	1.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000060260	Pwwp2b	ENSMUST00000172136	ENSMUSP00000130888	TRANSLATION	protein_coding	-	CCDS52427.1	1	600	0	1	1.5	52.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060260	Pwwp2b	ENSMUST00000209721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008318	Relt	ENSMUST00000139604	ENSMUSP00000119208	TRANSLATION	protein_coding	stop	-	5	123	0	1.315	0	30.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000008318	Relt	ENSMUST00000136231	ENSMUSP00000121443	TRANSLATION	protein_coding	stop	-	2	119	0	1.315	0	30.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000008318	Relt	ENSMUST00000156855	ENSMUSP00000120042	TRANSLATION	protein_coding	stop	-	5	123	0	1.315	0	30.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000008318	Relt	ENSMUST00000008462	ENSMUSP00000008462	TRANSLATION	protein_coding	-	CCDS21506.1	1	436	0	1.315	0.5	95.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000008318	Relt	ENSMUST00000142885	ENSMUSP00000121049	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000008318	Relt	ENSMUST00000155413	ENSMUSP00000118150	TRANSLATION	nonsense_mediated_decay	-	-	1	119	0	1.115	0	30.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000055826	Tescl	ENSMUST00000069562	ENSMUSP00000064132	TRANSLATION	protein_coding	-	CCDS52138.1	-	231	5	0.36	0.5	26.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000040660	Cyp2b9	ENSMUST00000082214	ENSMUSP00000080846	TRANSLATION	protein_coding	-	CCDS21001.1	1	491	34	9	0.5	488.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036931	Nfkbid	ENSMUST00000108176	ENSMUSP00000103811	TRANSLATION	protein_coding	-	-	1	470	0	4.51	0	58.2	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000036931	Nfkbid	ENSMUST00000108175	ENSMUSP00000103810	TRANSLATION	protein_coding	-	CCDS21091.1	1	327	0	4.51	3.9	58.2	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000036931	Nfkbid	ENSMUST00000153042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036931	Nfkbid	ENSMUST00000046177	ENSMUSP00000042317	TRANSLATION	protein_coding	-	CCDS21091.1	1	327	0	4.51	3.9	58.2	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000058709	Egln2	ENSMUST00000134906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058709	Egln2	ENSMUST00000080058	ENSMUSP00000078966	TRANSLATION	protein_coding	-	CCDS21011.1	1	419	3	3.75	1.5	67.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058709	Egln2	ENSMUST00000108382	ENSMUSP00000104019	TRANSLATION	protein_coding	-	CCDS21011.1	5	419	3	3.75	1.5	67.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058709	Egln2	ENSMUST00000152021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030713	Klk7	ENSMUST00000032955	ENSMUSP00000032955	TRANSLATION	protein_coding	-	CCDS21183.1	1	249	7	4.36	1.5	227.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000095115	Itpripl2	ENSMUST00000178344	ENSMUSP00000136409	TRANSLATION	protein_coding	-	CCDS52373.1	-	535	0	0	5.1	35.8	0	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000093639	Lim2	ENSMUST00000177375	ENSMUSP00000158870	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	185	0	0	0.5	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000045824	Olfr574	ENSMUST00000211329	ENSMUSP00000147694	TRANSLATION	protein_coding	-	-	-	336	0	0.16	0	318.4	5	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045824	Olfr574	ENSMUST00000052997	ENSMUSP00000095815	TRANSLATION	protein_coding	-	CCDS21554.1	-	346	0	0.16	0.5	318.4	5	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068566	Myadm	ENSMUST00000096744	ENSMUSP00000094505	TRANSLATION	protein_coding	-	CCDS51964.1	1	320	0	0	0.5	113.1	9	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000068566	Myadm	ENSMUST00000203328	ENSMUSP00000144984	TRANSLATION	protein_coding	-	CCDS51964.1	2	320	0	0	0.5	113.1	9	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000068566	Myadm	ENSMUST00000164553	ENSMUSP00000131318	TRANSLATION	protein_coding	-	CCDS51964.1	1	320	0	0	0.5	113.1	9	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000068566	Myadm	ENSMUST00000204541	ENSMUSP00000145426	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	36.4	4	-2,0	-	-	-1	MINOR
ENSMUSG00000068566	Myadm	ENSMUST00000203566	ENSMUSP00000145120	TRANSLATION	protein_coding	-	CCDS51964.1	1	320	0	0	0.5	113.1	9	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000044485	Klk1b11	ENSMUST00000007156	ENSMUSP00000007156	TRANSLATION	protein_coding	-	CCDS21192.1	1	261	7	4.3	1.7	245.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000094700	Vmn1r158	ENSMUST00000174643	ENSMUSP00000133990	TRANSLATION	protein_coding	-	CCDS59720.1	-	307	0	0	1.5	57.5	0	-2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000044903	Psg22	ENSMUST00000051973	ENSMUSP00000050633	TRANSLATION	protein_coding	-	CCDS20876.1	1	475	0	3.2	0.5	157.5	0	0,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000044903	Psg22	ENSMUST00000208221	ENSMUSP00000146795	TRANSLATION	protein_coding	-	CCDS20876.1	1	475	0	3.2	0.5	157.5	0	0,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000044903	Psg22	ENSMUST00000108481	ENSMUSP00000104121	TRANSLATION	protein_coding	-	-	1	514	0	3.2	0	157.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000094531	Olfr671	ENSMUST00000078710	ENSMUSP00000077774	TRANSLATION	protein_coding	-	CCDS21635.1	-	313	0	0.36	6.4	390.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000094531	Olfr671	ENSMUST00000210963	ENSMUSP00000148008	TRANSLATION	protein_coding	-	-	5	317	0	0.36	2.2	390.5	6	-4,-7	-	-	12.444	MINOR
ENSMUSG00000094531	Olfr671	ENSMUST00000217091	ENSMUSP00000150911	TRANSLATION	protein_coding	-	-	5	317	0	0.36	2.2	390.5	6	-4,-7	-	-	12.444	MINOR
ENSMUSG00000109542	Olfr470	ENSMUST00000219309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109542	Olfr470	ENSMUST00000073059	ENSMUSP00000072810	TRANSLATION	protein_coding	-	CCDS21694.1	-	314	0	0	2.7	170.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000109542	Olfr470	ENSMUST00000220193	ENSMUSP00000151543	TRANSLATION	protein_coding	-	CCDS21694.1	5	314	0	0	2.7	170.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031097	Tnni2	ENSMUST00000149529	ENSMUSP00000122733	TRANSLATION	protein_coding	-	CCDS40192.1	2	182	0	5	11.5	159	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031097	Tnni2	ENSMUST00000211192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031097	Tnni2	ENSMUST00000131034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031097	Tnni2	ENSMUST00000129618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031097	Tnni2	ENSMUST00000105971	ENSMUSP00000101591	TRANSLATION	protein_coding	-	CCDS40192.1	2	182	0	5	11.5	159	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031097	Tnni2	ENSMUST00000105973	ENSMUSP00000101593	TRANSLATION	protein_coding	start	-	3	190	0	4.75	0	154	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031097	Tnni2	ENSMUST00000210239	ENSMUSP00000147719	TRANSLATION	protein_coding	start/stop	-	5	172	0	5	0	149.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031097	Tnni2	ENSMUST00000145287	ENSMUSP00000121819	TRANSLATION	protein_coding	stop	-	3	135	0	3.5	0	142.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096294	Gm10302	ENSMUST00000174433	ENSMUSP00000159160	TRANSLATION	protein_coding	-	-	-	852	0	2.68	1.5	375.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000043925	Olfr544	ENSMUST00000051201	ENSMUSP00000051280	TRANSLATION	protein_coding	-	CCDS21532.1	2	334	0	0.2	1.8	244.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060112	Olfr60	ENSMUST00000216027	ENSMUSP00000150685	TRANSLATION	protein_coding	-	CCDS21973.1	5	311	0	0.2	2.8	171	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060112	Olfr60	ENSMUST00000210932	ENSMUSP00000147557	TRANSLATION	protein_coding	-	CCDS21973.1	2	311	0	0.2	2.8	171	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060112	Olfr60	ENSMUST00000211031	ENSMUSP00000147996	TRANSLATION	protein_coding	-	CCDS21973.1	3	311	0	0.2	2.8	171	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060112	Olfr60	ENSMUST00000215023	ENSMUSP00000150518	TRANSLATION	protein_coding	-	CCDS21973.1	5	311	0	0.2	2.8	171	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060112	Olfr60	ENSMUST00000075470	ENSMUSP00000074916	TRANSLATION	protein_coding	-	CCDS21973.1	-	311	0	0.2	2.8	171	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093941	Vmn1r131	ENSMUST00000179390	ENSMUSP00000136388	TRANSLATION	protein_coding	-	CCDS71902.1	-	306	0	0	1.5	56.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044030	Irf2bp1	ENSMUST00000053713	ENSMUSP00000061234	TRANSLATION	protein_coding	-	CCDS20885.1	-	584	8	0.2	7.5	136	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000094978	Scgb1b20	ENSMUST00000166714	ENSMUSP00000129326	TRANSLATION	protein_coding	-	CCDS57541.1	2	93	0	1.78	0.5	69.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000052396	Mogat2	ENSMUST00000064231	ENSMUSP00000064041	TRANSLATION	protein_coding	-	CCDS21478.1	1	334	0	0	7.3	388.8	0	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000052396	Mogat2	ENSMUST00000132343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030789	Itgax	ENSMUST00000033053	ENSMUSP00000033053	TRANSLATION	protein_coding	-	CCDS40150.1	1	1169	25	26.15	0.5	368.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000030789	Itgax	ENSMUST00000205408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030789	Itgax	ENSMUST00000205460	ENSMUSP00000145587	TRANSLATION	protein_coding	-	-	1	257	4	6.05	0	74.1	0	4,-1	-	-	0	MINOR
ENSMUSG00000030789	Itgax	ENSMUST00000206396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030527	Crtc3	ENSMUST00000127182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030527	Crtc3	ENSMUST00000152668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030527	Crtc3	ENSMUST00000127326	ENSMUSP00000117255	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030527	Crtc3	ENSMUST00000122255	ENSMUSP00000113540	TRANSLATION	protein_coding	-	CCDS21398.2	1	619	0	1	6.3	366.3	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000030527	Crtc3	ENSMUST00000149176	ENSMUSP00000123107	TRANSLATION	nonsense_mediated_decay	start	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030527	Crtc3	ENSMUST00000154761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047649	Cd3eap	ENSMUST00000047036	ENSMUSP00000044653	TRANSLATION	protein_coding	-	CCDS39798.1	1	399	0	0	0.5	112.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047649	Cd3eap	ENSMUST00000176333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000132046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000003857	ENSMUSP00000003857	TRANSLATION	protein_coding	-	CCDS21018.1	1	704	0	4	7.5	78.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000089832	Shkbp1	ENSMUST00000152053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000136589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089832	Shkbp1	ENSMUST00000123190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000157078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000148933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089832	Shkbp1	ENSMUST00000132684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000140638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089832	Shkbp1	ENSMUST00000143239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089832	Shkbp1	ENSMUST00000138449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070777	Ceacam20	ENSMUST00000207248	ENSMUSP00000147118	TRANSLATION	protein_coding	start	-	3	128	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000070777	Ceacam20	ENSMUST00000094753	ENSMUSP00000092344	TRANSLATION	protein_coding	-	CCDS20919.1	1	577	0	4.504	1.5	140.8	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038618	Rassf7	ENSMUST00000210993	ENSMUSP00000147782	TRANSLATION	protein_coding	stop	-	5	116	0	2.13	0	52	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000148975	ENSMUSP00000118078	TRANSLATION	protein_coding	stop	-	3	89	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000209760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038618	Rassf7	ENSMUST00000133763	ENSMUSP00000118313	TRANSLATION	protein_coding	stop	-	3	201	0	2.13	0	52	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000127613	ENSMUSP00000148079	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000046890	ENSMUSP00000038444	TRANSLATION	protein_coding	-	CCDS40182.1	1	359	0	2.33	2.7	52	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038618	Rassf7	ENSMUST00000141804	ENSMUSP00000115948	TRANSLATION	protein_coding	stop	-	2	243	0	2.13	0	52	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000209500	ENSMUSP00000147482	TRANSLATION	protein_coding	-	-	5	383	0	2.33	0	52	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000038618	Rassf7	ENSMUST00000153081	ENSMUSP00000123128	TRANSLATION	protein_coding	stop	-	2	199	0	2.13	0	52	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038618	Rassf7	ENSMUST00000149548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098132	Rassf10	ENSMUST00000182858	ENSMUSP00000138103	TRANSLATION	protein_coding	-	CCDS59737.1	-	508	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000007944	Ttc9b	ENSMUST00000008088	ENSMUSP00000008088	TRANSLATION	protein_coding	-	CCDS21028.1	1	239	0	1.16	5.1	24.5	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025474	Tubgcp2	ENSMUST00000026547	ENSMUSP00000026547	TRANSLATION	protein_coding	-	CCDS21960.1	1	905	0	4.42	3.9	404.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025474	Tubgcp2	ENSMUST00000210224	ENSMUSP00000147469	TRANSLATION	nonsense_mediated_decay	-	-	1	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025474	Tubgcp2	ENSMUST00000209930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025474	Tubgcp2	ENSMUST00000209574	ENSMUSP00000147473	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025474	Tubgcp2	ENSMUST00000211186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025474	Tubgcp2	ENSMUST00000211638	ENSMUSP00000147329	TRANSLATION	protein_coding	stop	-	1	900	0	4.42	0	404.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025474	Tubgcp2	ENSMUST00000211261	ENSMUSP00000147766	TRANSLATION	nonsense_mediated_decay	-	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045693	Nlrp4e	ENSMUST00000076470	ENSMUSP00000075794	TRANSLATION	protein_coding	-	CCDS20928.1	1	978	8	6.8	1.5	278.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045693	Nlrp4e	ENSMUST00000133392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008036	Ap2s1	ENSMUST00000205590	ENSMUSP00000146095	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	1	0	65.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000008036	Ap2s1	ENSMUST00000086112	ENSMUSP00000083281	TRANSLATION	protein_coding	-	CCDS52042.1	1	142	0	3.75	15.5	209.6	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000008036	Ap2s1	ENSMUST00000141496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008036	Ap2s1	ENSMUST00000205673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008036	Ap2s1	ENSMUST00000205607	ENSMUSP00000146195	TRANSLATION	protein_coding	-	-	3	92	0	2.75	0	135.2	0	-4,-7	-	-	5.538	MINOR
ENSMUSG00000045989	4930451I11Rik	ENSMUST00000205320	ENSMUSP00000146298	TRANSLATION	protein_coding	start	-	3	90	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000045989	4930451I11Rik	ENSMUST00000205907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045989	4930451I11Rik	ENSMUST00000061695	ENSMUSP00000049614	TRANSLATION	protein_coding	-	CCDS52402.1	1	111	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043066	Vmn1r66	ENSMUST00000060374	ENSMUSP00000055861	TRANSLATION	protein_coding	-	CCDS20790.1	-	310	0	0	0.5	92.5	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043066	Vmn1r66	ENSMUST00000228622	ENSMUSP00000153860	TRANSLATION	protein_coding	-	CCDS20790.1	-	310	0	0	0.5	92.5	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043066	Vmn1r66	ENSMUST00000227719	ENSMUSP00000154063	TRANSLATION	protein_coding	-	CCDS20790.1	-	310	0	0	0.5	92.5	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043066	Vmn1r66	ENSMUST00000226202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043066	Vmn1r66	ENSMUST00000228086	ENSMUSP00000153825	TRANSLATION	protein_coding	-	CCDS20790.1	-	310	0	0	0.5	92.5	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092032	Vmn2r59	ENSMUST00000233351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092032	Vmn2r59	ENSMUST00000233456	ENSMUSP00000156689	TRANSLATION	protein_coding	-	-	-	592	2	3.04	0	199.2	0	4,-1	-	-	7.16	MINOR
ENSMUSG00000092032	Vmn2r59	ENSMUST00000168489	ENSMUSP00000131856	TRANSLATION	protein_coding	-	CCDS52214.1	5	865	4	3.46	0.5	409.2	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000092032	Vmn2r59	ENSMUST00000233327	ENSMUSP00000156474	TRANSLATION	nonsense_mediated_decay	-	-	-	85	0	0.4	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000033685	Ucp2	ENSMUST00000153287	ENSMUSP00000115953	TRANSLATION	protein_coding	stop	-	2	112	0	2.75	0	72.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033685	Ucp2	ENSMUST00000129324	ENSMUSP00000115648	TRANSLATION	protein_coding	stop	-	5	65	0	1.75	0	33.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033685	Ucp2	ENSMUST00000149808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033685	Ucp2	ENSMUST00000126534	ENSMUSP00000120967	TRANSLATION	protein_coding	-	CCDS21498.1	1	309	0	7.08	13	226.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000033685	Ucp2	ENSMUST00000133498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033685	Ucp2	ENSMUST00000138673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033685	Ucp2	ENSMUST00000151221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033685	Ucp2	ENSMUST00000207890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033685	Ucp2	ENSMUST00000207748	ENSMUSP00000146337	TRANSLATION	protein_coding	stop	-	5	271	0	6.08	1.2	191.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033685	Ucp2	ENSMUST00000126381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033685	Ucp2	ENSMUST00000133044	ENSMUSP00000115598	TRANSLATION	protein_coding	stop	-	3	172	0	3.75	0	117.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090892	Vmn2r41	ENSMUST00000168807	ENSMUSP00000128337	TRANSLATION	protein_coding	-	CCDS57482.1	5	852	0	2.92	1.5	384.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040940	Arhgef1	ENSMUST00000129383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040940	Arhgef1	ENSMUST00000098683	ENSMUSP00000096280	TRANSLATION	protein_coding	-	CCDS52142.1	1	979	0	20.558	0.5	377.5	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000040940	Arhgef1	ENSMUST00000145783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040940	Arhgef1	ENSMUST00000144714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040940	Arhgef1	ENSMUST00000126918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040940	Arhgef1	ENSMUST00000151121	ENSMUSP00000114388	TRANSLATION	protein_coding	stop	-	3	101	0	2.798	0	89.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000129928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040940	Arhgef1	ENSMUST00000132786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040940	Arhgef1	ENSMUST00000117796	ENSMUSP00000113771	TRANSLATION	protein_coding	-	CCDS52140.1	1	976	0	20.558	0.5	377.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040940	Arhgef1	ENSMUST00000132751	ENSMUSP00000117008	TRANSLATION	protein_coding	start	-	5	616	0	10.1	0	125.2	0	1,-3	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000126484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040940	Arhgef1	ENSMUST00000047873	ENSMUSP00000046469	TRANSLATION	protein_coding	-	CCDS52141.1	1	920	0	20.538	1.5	377.5	0	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000040940	Arhgef1	ENSMUST00000206011	ENSMUSP00000145981	TRANSLATION	protein_coding	stop	-	2	102	0	3.048	0	47.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000206906	ENSMUSP00000146065	TRANSLATION	protein_coding	stop	-	5	192	0	5.128	0	192.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000205295	ENSMUSP00000146059	TRANSLATION	protein_coding	stop	-	5	233	0	6.048	0	204.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000206508	ENSMUSP00000146314	TRANSLATION	protein_coding	-	CCDS85239.1	1	919	0	20.538	1.5	377.5	0	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000040940	Arhgef1	ENSMUST00000206028	ENSMUSP00000145659	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040940	Arhgef1	ENSMUST00000117419	ENSMUSP00000113366	TRANSLATION	protein_coding	-	CCDS52141.1	1	920	0	20.538	1.5	377.5	0	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000040940	Arhgef1	ENSMUST00000127761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063582	Olfr666	ENSMUST00000081116	ENSMUSP00000079893	TRANSLATION	protein_coding	-	CCDS21631.1	-	318	0	0	7.6	346.9	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000063582	Olfr666	ENSMUST00000214757	ENSMUSP00000148919	TRANSLATION	protein_coding	-	CCDS21631.1	5	318	0	0	7.6	346.9	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030730	Atp2a1	ENSMUST00000146973	ENSMUSP00000119018	TRANSLATION	protein_coding	start	-	2	146	1	3.5	0	67.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030730	Atp2a1	ENSMUST00000032974	ENSMUSP00000032974	TRANSLATION	protein_coding	-	CCDS40125.1	1	994	19	19.58	12.2	479.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032777	Gtf3c1	ENSMUST00000055506	ENSMUSP00000056719	TRANSLATION	protein_coding	-	CCDS40122.1	1	2101	0	0	0.5	76.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032777	Gtf3c1	ENSMUST00000205697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032777	Gtf3c1	ENSMUST00000206127	ENSMUSP00000145607	TRANSLATION	protein_coding	stop	-	5	193	0	0	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032777	Gtf3c1	ENSMUST00000206183	ENSMUSP00000146022	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032777	Gtf3c1	ENSMUST00000205827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032777	Gtf3c1	ENSMUST00000206694	ENSMUSP00000145711	TRANSLATION	nonsense_mediated_decay	start	-	3	147	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032777	Gtf3c1	ENSMUST00000205444	ENSMUSP00000145856	TRANSLATION	nonsense_mediated_decay	-	-	1	294	0	0	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032777	Gtf3c1	ENSMUST00000205347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032777	Gtf3c1	ENSMUST00000205659	ENSMUSP00000145939	TRANSLATION	protein_coding	-	-	5	2005	0	0	0	76.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032777	Gtf3c1	ENSMUST00000206042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000146373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025498	Irf7	ENSMUST00000131399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025498	Irf7	ENSMUST00000155744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000127161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000127223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000106023	ENSMUSP00000101644	TRANSLATION	protein_coding	-	CCDS57594.1	1	425	0	4.82	1.5	289.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025498	Irf7	ENSMUST00000097952	ENSMUSP00000095565	TRANSLATION	protein_coding	-	CCDS57595.1	1	426	0	4.62	0.5	289.5	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000025498	Irf7	ENSMUST00000026571	ENSMUSP00000026571	TRANSLATION	protein_coding	-	CCDS22005.1	1	457	0	4.82	1.5	289.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000025498	Irf7	ENSMUST00000156938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000210506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025498	Irf7	ENSMUST00000123525	ENSMUSP00000121026	TRANSLATION	protein_coding	start/stop	-	5	251	0	3.37	0	204.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025498	Irf7	ENSMUST00000209899	ENSMUSP00000147529	TRANSLATION	nonsense_mediated_decay	-	-	1	237	0	2.15	0	128.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025498	Irf7	ENSMUST00000148414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034990	Otoa	ENSMUST00000207598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034990	Otoa	ENSMUST00000171880	ENSMUSP00000125928	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000034990	Otoa	ENSMUST00000170106	ENSMUSP00000133005	TRANSLATION	protein_coding	stop	-	3	209	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000034990	Otoa	ENSMUST00000163275	ENSMUSP00000146799	TRANSLATION	nonsense_mediated_decay	start	-	1	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034990	Otoa	ENSMUST00000168311	ENSMUSP00000132951	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034990	Otoa	ENSMUST00000165409	ENSMUSP00000146993	TRANSLATION	nonsense_mediated_decay	start	-	1	70	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034990	Otoa	ENSMUST00000047025	ENSMUSP00000044177	TRANSLATION	protein_coding	-	CCDS40114.1	1	1137	0	0	0.5	0	0	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000025439	Clns1a	ENSMUST00000148125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025439	Clns1a	ENSMUST00000026506	ENSMUSP00000026506	TRANSLATION	protein_coding	-	CCDS21462.1	1	241	0	3.8	1.5	118.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025439	Clns1a	ENSMUST00000205667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046456	Tmem150b	ENSMUST00000086364	ENSMUSP00000083550	TRANSLATION	protein_coding	-	CCDS20742.1	1	123	0	0	0.5	92.1	3	1,-4	-	-	1.422	MINOR
ENSMUSG00000046456	Tmem150b	ENSMUST00000086363	ENSMUSP00000083549	TRANSLATION	protein_coding	-	CCDS51975.1	1	238	0	0	1.5	168.4	5	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000025489	Ifitm5	ENSMUST00000026562	ENSMUSP00000026562	TRANSLATION	protein_coding	-	CCDS21993.1	1	134	0	0	6.3	88.6	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000030536	Iqgap1	ENSMUST00000205304	ENSMUSP00000146126	TRANSLATION	protein_coding	stop	-	3	101	0	2	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030536	Iqgap1	ENSMUST00000167377	ENSMUSP00000128278	TRANSLATION	protein_coding	-	CCDS40001.1	1	1657	0	16.88	12.8	482.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030536	Iqgap1	ENSMUST00000206149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030536	Iqgap1	ENSMUST00000205606	ENSMUSP00000145991	TRANSLATION	nonsense_mediated_decay	start	-	5	37	0	0.882	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030536	Iqgap1	ENSMUST00000205813	ENSMUSP00000145556	TRANSLATION	protein_coding	start/stop	-	3	186	0	4.33	0	72.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030536	Iqgap1	ENSMUST00000205383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030536	Iqgap1	ENSMUST00000205540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030536	Iqgap1	ENSMUST00000205824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070814	Zswim9	ENSMUST00000144470	ENSMUSP00000122300	TRANSLATION	protein_coding	stop	-	2	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070814	Zswim9	ENSMUST00000135898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070814	Zswim9	ENSMUST00000211707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070814	Zswim9	ENSMUST00000140530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070814	Zswim9	ENSMUST00000119139	ENSMUSP00000112652	TRANSLATION	protein_coding	-	-	1	447	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000070814	Zswim9	ENSMUST00000108532	ENSMUSP00000104172	TRANSLATION	protein_coding	-	-	5	849	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000070814	Zswim9	ENSMUST00000119558	ENSMUSP00000112825	TRANSLATION	protein_coding	-	-	5	130	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000070814	Zswim9	ENSMUST00000137574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030463	4933421I07Rik	ENSMUST00000206593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030463	4933421I07Rik	ENSMUST00000032648	ENSMUSP00000032648	TRANSLATION	protein_coding	-	CCDS52217.1	1	214	0	0	0.5	30.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000073893	Olfr472	ENSMUST00000209670	ENSMUSP00000148150	TRANSLATION	protein_coding	-	CCDS21695.1	3	310	0	0.42	3.9	162.7	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073893	Olfr472	ENSMUST00000210420	ENSMUSP00000147272	TRANSLATION	protein_coding	-	CCDS21695.1	-	310	0	0.42	3.9	162.7	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073893	Olfr472	ENSMUST00000216937	ENSMUSP00000150404	TRANSLATION	protein_coding	-	CCDS21695.1	3	310	0	0.42	3.9	162.7	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000066268	Olfr586	ENSMUST00000211075	ENSMUSP00000147883	TRANSLATION	protein_coding	-	-	5	313	0	0.42	4.9	368.8	6	-4,-6	-	-	13	ALTERNATIVE:1
ENSMUSG00000066268	Olfr586	ENSMUST00000213281	ENSMUSP00000150082	TRANSLATION	protein_coding	-	-	5	313	0	0.42	4.9	368.8	6	-4,-6	-	-	13	ALTERNATIVE:1
ENSMUSG00000066268	Olfr586	ENSMUST00000215304	ENSMUSP00000149226	TRANSLATION	protein_coding	-	-	5	313	0	0.42	4.9	368.8	6	-4,-6	-	-	13	ALTERNATIVE:1
ENSMUSG00000066268	Olfr586	ENSMUST00000084811	ENSMUSP00000081872	TRANSLATION	protein_coding	-	CCDS21561.1	-	317	0	0.42	0.5	368.8	6	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000052212	Cd177	ENSMUST00000063956	ENSMUSP00000064934	TRANSLATION	protein_coding	-	CCDS20962.1	1	817	0	0	0.5	153.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000052212	Cd177	ENSMUST00000206160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034538	Zfp418	ENSMUST00000209387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034538	Zfp418	ENSMUST00000051435	ENSMUSP00000057159	TRANSLATION	protein_coding	-	CCDS39756.1	1	652	56	1.4	0.5	364	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000073907	Olfr689	ENSMUST00000098153	ENSMUSP00000095756	TRANSLATION	protein_coding	-	CCDS21646.1	-	320	0	0.4	2.7	247.8	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073907	Olfr689	ENSMUST00000215413	ENSMUSP00000151049	TRANSLATION	protein_coding	-	CCDS21646.1	5	320	0	0.4	2.7	247.8	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000060759	Olfr503	ENSMUST00000078162	ENSMUSP00000077296	TRANSLATION	protein_coding	-	CCDS21718.1	-	323	0	0	6.4	343.5	6	-4,-7	-	-	8	PRINCIPAL:2
ENSMUSG00000060759	Olfr503	ENSMUST00000211693	ENSMUSP00000147778	TRANSLATION	protein_coding	-	-	-	321	0	0	6.4	343.5	6	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000078796	Zfp541	ENSMUST00000108509	ENSMUSP00000104149	TRANSLATION	protein_coding	-	CCDS39781.1	1	1363	15	2.67	0.5	88.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000078796	Zfp541	ENSMUST00000210805	ENSMUSP00000148143	TRANSLATION	protein_coding	-	-	1	1302	15	2.67	1.5	88.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000078796	Zfp541	ENSMUST00000209369	ENSMUSP00000147475	TRANSLATION	protein_coding	-	CCDS39781.1	5	1363	15	2.67	0.5	88.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030378	Sult2a8	ENSMUST00000125941	ENSMUSP00000116469	TRANSLATION	protein_coding	stop	-	5	189	9	4.35	0	154.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030378	Sult2a8	ENSMUST00000211800	ENSMUSP00000148036	TRANSLATION	protein_coding	stop	-	5	128	7	2.75	0	86.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030378	Sult2a8	ENSMUST00000209425	ENSMUSP00000147301	TRANSLATION	nonsense_mediated_decay	-	-	1	157	8	3.35	0	111.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030378	Sult2a8	ENSMUST00000209972	ENSMUSP00000147983	TRANSLATION	protein_coding	stop	-	3	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030378	Sult2a8	ENSMUST00000210366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030378	Sult2a8	ENSMUST00000168252	ENSMUSP00000128428	TRANSLATION	protein_coding	-	CCDS20833.1	1	282	19	6.15	0.5	240.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030378	Sult2a8	ENSMUST00000210396	ENSMUSP00000148165	TRANSLATION	protein_coding	stop	-	5	128	7	2.75	0	86.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030378	Sult2a8	ENSMUST00000063509	ENSMUSP00000066897	TRANSLATION	protein_coding	-	CCDS20833.1	1	282	19	6.15	0.5	240.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035285	Nat14	ENSMUST00000208754	ENSMUSP00000146593	TRANSLATION	protein_coding	stop	-	2	65	1	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000035285	Nat14	ENSMUST00000207687	ENSMUSP00000147229	TRANSLATION	protein_coding	-	CCDS20749.1	1	206	23	0	7.5	24.9	3	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000035285	Nat14	ENSMUST00000207506	ENSMUSP00000146577	TRANSLATION	protein_coding	stop	-	3	121	1	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000035285	Nat14	ENSMUST00000047309	ENSMUSP00000045354	TRANSLATION	protein_coding	-	CCDS20749.1	1	206	23	0	7.5	24.9	3	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000035285	Nat14	ENSMUST00000207527	ENSMUSP00000146765	TRANSLATION	protein_coding	stop	-	3	154	13	0	0	23.6	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000053025	Sv2b	ENSMUST00000207001	ENSMUSP00000146277	TRANSLATION	nonsense_mediated_decay	start	-	5	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053025	Sv2b	ENSMUST00000085164	ENSMUSP00000082254	TRANSLATION	protein_coding	-	CCDS21368.1	1	683	0	5.37	6.3	145.2	11	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053025	Sv2b	ENSMUST00000206675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053025	Sv2b	ENSMUST00000165175	ENSMUSP00000127245	TRANSLATION	protein_coding	-	CCDS21368.1	1	683	0	5.37	6.3	145.2	11	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053025	Sv2b	ENSMUST00000206236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053025	Sv2b	ENSMUST00000206344	ENSMUSP00000146049	TRANSLATION	protein_coding	-	CCDS21368.1	1	683	0	5.37	6.3	145.2	11	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053025	Sv2b	ENSMUST00000206845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040703	Cyp2s1	ENSMUST00000152560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040703	Cyp2s1	ENSMUST00000156714	ENSMUSP00000122264	TRANSLATION	protein_coding	stop	-	5	90	1	1.88	0	44.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040703	Cyp2s1	ENSMUST00000108395	ENSMUSP00000104032	TRANSLATION	protein_coding	-	-	1	448	29	8.532	0	355.4	0	3,-2	-	-	11.388	MINOR
ENSMUSG00000040703	Cyp2s1	ENSMUST00000043314	ENSMUSP00000041175	TRANSLATION	protein_coding	-	CCDS20997.1	1	501	32	9.4	1.5	403.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000062524	Ncr1	ENSMUST00000006792	ENSMUSP00000006792	TRANSLATION	protein_coding	-	CCDS20734.1	1	325	0	3.9	1.5	65.7	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062524	Ncr1	ENSMUST00000126417	ENSMUSP00000145847	TRANSLATION	protein_coding	-	-	1	288	0	3.4	0	59.9	1	-4,-5	-	-	10.47	MINOR
ENSMUSG00000007209	Ceacam9	ENSMUST00000001984	ENSMUSP00000001984	TRANSLATION	protein_coding	-	CCDS20852.1	1	234	0	1.8	0.5	98.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000007209	Ceacam9	ENSMUST00000206252	ENSMUSP00000145785	TRANSLATION	protein_coding	stop	-	5	150	0	0.8	0	50.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000048779	P2ry6	ENSMUST00000208653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048779	P2ry6	ENSMUST00000060174	ENSMUSP00000055697	TRANSLATION	protein_coding	-	CCDS21507.1	1	328	0	0.6	7.5	145.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048779	P2ry6	ENSMUST00000209196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074369	Obox2	ENSMUST00000036575	ENSMUSP00000042995	TRANSLATION	protein_coding	-	CCDS52034.1	1	151	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074369	Obox2	ENSMUST00000174305	ENSMUSP00000134275	TRANSLATION	protein_coding	-	CCDS52034.1	5	151	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074369	Obox2	ENSMUST00000174076	ENSMUSP00000133793	TRANSLATION	protein_coding	-	CCDS52034.1	5	151	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000074369	Obox2	ENSMUST00000172478	ENSMUSP00000133450	TRANSLATION	protein_coding	-	CCDS52034.1	5	151	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000030641	Ddias	ENSMUST00000032877	ENSMUSP00000032877	TRANSLATION	protein_coding	-	CCDS40022.1	1	899	5	1.1856	0.5	40.7	0	-3,-1	-	-	16.436	PRINCIPAL:1
ENSMUSG00000030641	Ddias	ENSMUST00000209074	ENSMUSP00000146534	TRANSLATION	protein_coding	stop	-	3	49	5	0.5856	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000030641	Ddias	ENSMUST00000208356	ENSMUSP00000146512	TRANSLATION	protein_coding	stop	-	5	185	5	1.1856	0	44.9	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000030641	Ddias	ENSMUST00000207931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006313	Upk1a	ENSMUST00000006476	ENSMUSP00000006476	TRANSLATION	protein_coding	-	CCDS21103.1	1	257	0	0	5.1	95	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000046865	Fbl	ENSMUST00000208259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046865	Fbl	ENSMUST00000207956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046865	Fbl	ENSMUST00000207384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046865	Fbl	ENSMUST00000207397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046865	Fbl	ENSMUST00000208967	ENSMUSP00000146927	TRANSLATION	protein_coding	stop	-	5	85	0	1.33	0	33.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046865	Fbl	ENSMUST00000042405	ENSMUSP00000037613	TRANSLATION	protein_coding	-	CCDS21036.1	1	327	14	6.196	1.5	362.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053291	Rab4b	ENSMUST00000134462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053291	Rab4b	ENSMUST00000141906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053291	Rab4b	ENSMUST00000128409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053291	Rab4b	ENSMUST00000131420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053291	Rab4b	ENSMUST00000152753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053291	Rab4b	ENSMUST00000131278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053291	Rab4b	ENSMUST00000153511	ENSMUSP00000138477	TRANSLATION	nonsense_mediated_decay	-	-	5	103	13	2.83	0	115.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053291	Rab4b	ENSMUST00000093040	ENSMUSP00000090727	TRANSLATION	protein_coding	-	CCDS21012.1	1	213	22	5.51	13.3	194.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000095745	Vmn1r243	ENSMUST00000172989	ENSMUSP00000133350	TRANSLATION	protein_coding	-	CCDS71897.1	-	307	0	0	1.5	61.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000030602	Pak4	ENSMUST00000108283	ENSMUSP00000103918	TRANSLATION	protein_coding	-	CCDS21049.1	1	593	19	6	7.5	283	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000030602	Pak4	ENSMUST00000032823	ENSMUSP00000032823	TRANSLATION	protein_coding	-	CCDS21049.1	1	593	19	6	7.5	283	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000030602	Pak4	ENSMUST00000135923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030602	Pak4	ENSMUST00000150454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117477	Gm50092	ENSMUST00000234781	ENSMUSP00000157233	TRANSLATION	protein_coding	-	-	-	575	0	0	0	0	0	-2,1	-	-	0	PRINCIPAL:1
ENSMUSG00000047655	Vmn1r74	ENSMUST00000050416	ENSMUSP00000055148	TRANSLATION	protein_coding	-	CCDS20801.1	-	304	0	0	0.5	104.9	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000047655	Vmn1r74	ENSMUST00000228471	ENSMUSP00000154746	TRANSLATION	protein_coding	-	CCDS20801.1	-	304	0	0	0.5	104.9	5	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000095232	Scgb1b19	ENSMUST00000165813	ENSMUSP00000132661	TRANSLATION	protein_coding	-	CCDS59730.1	5	93	0	1.33	0.5	71.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000074419	Gm15448	ENSMUST00000189095	ENSMUSP00000140974	TRANSLATION	protein_coding	stop	-	5	635	0	5.8	0	132.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000074419	Gm15448	ENSMUST00000108620	ENSMUSP00000104260	TRANSLATION	protein_coding	-	-	5	564	0	4.5	0.5	132.2	0	2,-3	-	-	9.402	MINOR
ENSMUSG00000074419	Gm15448	ENSMUST00000153846	ENSMUSP00000121707	TRANSLATION	protein_coding	-	-	5	682	0	5.8	0.5	132.2	0	2,-3	-	-	12	PRINCIPAL:5
ENSMUSG00000074419	Gm15448	ENSMUST00000094911	ENSMUSP00000092515	TRANSLATION	protein_coding	stop	-	5	519	0	4.5	0	132.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000074419	Gm15448	ENSMUST00000108619	ENSMUSP00000104259	TRANSLATION	protein_coding	-	-	5	665	0	5.5	1.5	132.2	0	2,-3	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000070547	Mrgprb1	ENSMUST00000188918	ENSMUSP00000140432	TRANSLATION	protein_coding	-	-	3	122	0	0.4	0	0	1	-4,-7	-	-	2.448	MINOR
ENSMUSG00000070547	Mrgprb1	ENSMUST00000094384	ENSMUSP00000091946	TRANSLATION	protein_coding	-	CCDS52257.1	1	350	0	0.98	0.5	35.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070547	Mrgprb1	ENSMUST00000188095	ENSMUSP00000140434	TRANSLATION	protein_coding	-	-	3	57	0	0.16	0	0	0	-4,-7	-	-	0.978	MINOR
ENSMUSG00000070509	Rgma	ENSMUST00000094312	ENSMUSP00000091870	TRANSLATION	protein_coding	-	CCDS21362.2	1	454	0	2.93	0.5	471.5	0	-3,0	-	-	12	PRINCIPAL:2
ENSMUSG00000070509	Rgma	ENSMUST00000119206	ENSMUSP00000112599	TRANSLATION	protein_coding	-	-	1	344	0	1.93	0	387.3	0	-4,-7	-	-	4.902	MINOR
ENSMUSG00000070509	Rgma	ENSMUST00000206253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070509	Rgma	ENSMUST00000128471	ENSMUSP00000116552	TRANSLATION	protein_coding	stop	-	3	100	0	1.33	0	78.2	0	0,-3	-	-	-1	MINOR
ENSMUSG00000070509	Rgma	ENSMUST00000139780	ENSMUSP00000145758	TRANSLATION	protein_coding	-	-	1	438	0	2.93	0.5	471.5	0	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000001802	Lrp3	ENSMUST00000118444	ENSMUSP00000113406	TRANSLATION	protein_coding	-	-	5	769	29	1.58	5.1	190.5	2	-2,-5	-	-	18.668	ALTERNATIVE:1
ENSMUSG00000001802	Lrp3	ENSMUST00000153163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001802	Lrp3	ENSMUST00000122409	ENSMUSP00000114026	TRANSLATION	protein_coding	-	CCDS52202.1	1	790	29	2.03	0.5	190.5	2	-1,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000001802	Lrp3	ENSMUST00000155404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055078	Gabra5	ENSMUST00000068456	ENSMUSP00000063276	TRANSLATION	protein_coding	-	CCDS21322.1	1	463	6	5.55	8.8	275	2	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000055078	Gabra5	ENSMUST00000206734	ENSMUSP00000145685	TRANSLATION	protein_coding	-	CCDS21322.1	1	463	6	5.55	8.8	275	2	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000055078	Gabra5	ENSMUST00000206382	ENSMUSP00000146238	TRANSLATION	protein_coding	-	CCDS21322.1	5	463	6	5.55	8.8	275	2	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000036647	Olfr6	ENSMUST00000213552	ENSMUSP00000149346	TRANSLATION	protein_coding	-	CCDS21681.1	5	316	0	0.2	6.4	190.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000036647	Olfr6	ENSMUST00000219365	ENSMUSP00000151272	TRANSLATION	protein_coding	-	CCDS21681.1	-	316	0	0.2	6.4	190.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000036647	Olfr6	ENSMUST00000213651	ENSMUSP00000149919	TRANSLATION	protein_coding	-	CCDS21681.1	5	316	0	0.2	6.4	190.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000036647	Olfr6	ENSMUST00000040983	ENSMUSP00000048740	TRANSLATION	protein_coding	-	CCDS21681.1	5	316	0	0.2	6.4	190.6	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000078816	Prkcg	ENSMUST00000172109	ENSMUSP00000131351	TRANSLATION	protein_coding	-	CCDS80649.1	1	646	32	14.229	1.5	434.2	0	-4,-6	-	-	12.188	MINOR
ENSMUSG00000078816	Prkcg	ENSMUST00000203454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078816	Prkcg	ENSMUST00000203600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078816	Prkcg	ENSMUST00000203081	ENSMUSP00000145498	TRANSLATION	nonsense_mediated_decay	start	-	5	31	2	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078816	Prkcg	ENSMUST00000100301	ENSMUSP00000097874	TRANSLATION	protein_coding	-	CCDS57470.1	1	697	37	15.029	6.3	451.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000059768	Olfr682-ps1	ENSMUST00000071242	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000059768	Olfr682-ps1	ENSMUST00000214399	ENSMUSP00000154052	TRANSLATION	protein_coding	start/stop	-	5	299	0	0.76	0	237.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035623	Rsf1	ENSMUST00000205536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035623	Rsf1	ENSMUST00000135270	ENSMUSP00000145808	TRANSLATION	nonsense_mediated_decay	start	-	5	121	2	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035623	Rsf1	ENSMUST00000127891	ENSMUSP00000145905	TRANSLATION	nonsense_mediated_decay	start	-	3	109	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000035623	Rsf1	ENSMUST00000107153	ENSMUSP00000102771	TRANSLATION	protein_coding	-	CCDS40025.1	5	1441	8	1.43	0.5	83.1	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000035623	Rsf1	ENSMUST00000150288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035623	Rsf1	ENSMUST00000156060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035623	Rsf1	ENSMUST00000123731	ENSMUSP00000145663	TRANSLATION	nonsense_mediated_decay	start	-	5	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035623	Rsf1	ENSMUST00000206866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030386	Zfp606	ENSMUST00000098822	ENSMUSP00000096421	TRANSLATION	protein_coding	-	CCDS20810.1	1	794	58	1.4	4.1	364.2	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000030386	Zfp606	ENSMUST00000133515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030386	Zfp606	ENSMUST00000123589	ENSMUSP00000147558	TRANSLATION	protein_coding	-	CCDS85215.1	1	87	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030386	Zfp606	ENSMUST00000151933	ENSMUSP00000122197	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030987	Stim1	ENSMUST00000210544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030987	Stim1	ENSMUST00000033289	ENSMUSP00000033289	TRANSLATION	protein_coding	-	CCDS21530.1	1	685	5	9.13	7.5	179.1	1	3,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000030987	Stim1	ENSMUST00000210266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030987	Stim1	ENSMUST00000211141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030987	Stim1	ENSMUST00000211058	ENSMUSP00000147314	TRANSLATION	protein_coding	start/stop	-	2	207	0	2.8	0	149.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030987	Stim1	ENSMUST00000210834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030987	Stim1	ENSMUST00000211457	ENSMUSP00000147410	TRANSLATION	protein_coding	-	-	5	540	5	9.13	5.3	179.1	1	3,-2	-	-	18.986	ALTERNATIVE:1
ENSMUSG00000030987	Stim1	ENSMUST00000210761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030987	Stim1	ENSMUST00000209255	ENSMUSP00000147443	TRANSLATION	protein_coding	-	-	5	793	5	9.13	1.7	179.1	1	3,-2	-	-	17.324	MINOR
ENSMUSG00000025465	Echs1	ENSMUST00000211120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025465	Echs1	ENSMUST00000026538	ENSMUSP00000026538	TRANSLATION	protein_coding	-	CCDS21964.1	1	290	24	6.7	2.8	341.7	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000025465	Echs1	ENSMUST00000155647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025465	Echs1	ENSMUST00000151505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025465	Echs1	ENSMUST00000147643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025465	Echs1	ENSMUST00000125337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096146	Kcnj11	ENSMUST00000211674	ENSMUSP00000147439	TRANSLATION	protein_coding	-	CCDS21274.1	-	390	0	6.08	6.3	451.7	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096146	Kcnj11	ENSMUST00000209863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096146	Kcnj11	ENSMUST00000209291	ENSMUSP00000147801	TRANSLATION	protein_coding	stop	-	2	83	0	1.33	0	115.2	1	4,-1	-	-	-1	MINOR
ENSMUSG00000096146	Kcnj11	ENSMUST00000180081	ENSMUSP00000136002	TRANSLATION	protein_coding	stop	-	2	254	0	3	0	352.7	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000096146	Kcnj11	ENSMUST00000209881	ENSMUSP00000148249	TRANSLATION	protein_coding	stop	-	5	142	0	2.75	0	172.1	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000096348	Vmn1r250	ENSMUST00000098722	ENSMUSP00000096318	TRANSLATION	protein_coding	-	CCDS52108.1	-	321	0	0	0.5	58.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074166	AW146154	ENSMUST00000098509	ENSMUSP00000096109	TRANSLATION	protein_coding	-	CCDS52211.1	1	468	51	2.05	0.5	307.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074166	AW146154	ENSMUST00000205634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074166	AW146154	ENSMUST00000205995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074166	AW146154	ENSMUST00000205572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040952	Rps19	ENSMUST00000138662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040952	Rps19	ENSMUST00000108428	ENSMUSP00000104066	TRANSLATION	protein_coding	-	-	1	212	0	3.41	0	195.4	0	-4,-6	-	-	11.214	MINOR
ENSMUSG00000040952	Rps19	ENSMUST00000108429	ENSMUSP00000104067	TRANSLATION	protein_coding	-	CCDS20966.1	2	145	0	3.74	15.5	197.5	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000040952	Rps19	ENSMUST00000129847	ENSMUSP00000138466	TRANSLATION	nonsense_mediated_decay	-	-	2	72	0	1.75	0	74.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040952	Rps19	ENSMUST00000108430	ENSMUSP00000104068	TRANSLATION	protein_coding	-	CCDS20966.1	1	145	0	3.74	15.5	197.5	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000040952	Rps19	ENSMUST00000130335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040952	Rps19	ENSMUST00000124035	ENSMUSP00000116311	TRANSLATION	protein_coding	stop	-	2	176	0	3.41	0	195.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040952	Rps19	ENSMUST00000156372	ENSMUSP00000120774	TRANSLATION	protein_coding	stop	-	2	137	0	3.08	0	173.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040952	Rps19	ENSMUST00000153451	ENSMUSP00000114949	TRANSLATION	protein_coding	stop	-	3	133	0	3.41	0	187.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040952	Rps19	ENSMUST00000146004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052301	Doc2a	ENSMUST00000141805	ENSMUSP00000118143	TRANSLATION	protein_coding	stop	-	5	133	4	1.78	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000152051	ENSMUSP00000123483	TRANSLATION	protein_coding	stop	-	5	262	13	4.87	0	86.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000205938	ENSMUSP00000145630	TRANSLATION	protein_coding	stop	-	5	35	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000064110	ENSMUSP00000070119	TRANSLATION	protein_coding	-	CCDS21847.1	1	405	20	9.2	1.5	162.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000052301	Doc2a	ENSMUST00000176771	ENSMUSP00000135114	TRANSLATION	nonsense_mediated_decay	start	-	5	211	13	5.37	0	86.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000152406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052301	Doc2a	ENSMUST00000147257	ENSMUSP00000123143	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000137873	ENSMUSP00000119779	TRANSLATION	protein_coding	stop	-	3	177	6	3.11	0	55.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052301	Doc2a	ENSMUST00000139174	ENSMUSP00000117376	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038646	Ramac	ENSMUST00000042166	ENSMUSP00000039065	TRANSLATION	protein_coding	-	CCDS21406.1	1	119	0	1.75	7.6	85.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038646	Ramac	ENSMUST00000133034	ENSMUSP00000123342	TRANSLATION	protein_coding	stop	-	2	35	0	1	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038646	Ramac	ENSMUST00000118190	ENSMUSP00000113339	TRANSLATION	protein_coding	-	CCDS21406.1	1	119	0	1.75	7.6	85.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000010760	Phlda2	ENSMUST00000010904	ENSMUSP00000010904	TRANSLATION	protein_coding	-	CCDS22042.1	1	144	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000010760	Phlda2	ENSMUST00000207561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010760	Phlda2	ENSMUST00000207425	ENSMUSP00000146883	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037541	Shank2	ENSMUST00000105902	ENSMUSP00000101522	TRANSLATION	protein_coding	-	-	5	1841	3	12.59	1.5	296.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037541	Shank2	ENSMUST00000146006	ENSMUSP00000146440	TRANSLATION	protein_coding	-	CCDS40201.1	2	1262	3	3.5	1.5	105.5	0	-4,-5	-	-	3	MINOR
ENSMUSG00000037541	Shank2	ENSMUST00000136979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037541	Shank2	ENSMUST00000097929	ENSMUSP00000095542	TRANSLATION	protein_coding	-	-	5	1255	3	3.5	1	105.5	0	-4,-5	-	-	3	MINOR
ENSMUSG00000037541	Shank2	ENSMUST00000239495	ENSMUSP00000159313	TRANSLATION	protein_coding	-	-	-	1281	3	4.1	0.5	105.5	0	-4,-2	-	-	3	MINOR
ENSMUSG00000037541	Shank2	ENSMUST00000213146	ENSMUSP00000149134	TRANSLATION	protein_coding	stop	-	5	816	0	11.99	0	223.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037541	Shank2	ENSMUST00000105900	ENSMUSP00000101520	TRANSLATION	protein_coding	-	CCDS85484.1	5	1472	3	5.14	1.5	148.7	0	-4,-7	-	-	3	MINOR
ENSMUSG00000095973	Vmn1r116	ENSMUST00000164288	ENSMUSP00000128742	TRANSLATION	protein_coding	-	CCDS52084.1	-	307	0	0	0.5	56.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040987	Mill2	ENSMUST00000207014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040987	Mill2	ENSMUST00000206487	ENSMUSP00000145895	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0.3	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000040987	Mill2	ENSMUST00000072386	ENSMUSP00000072223	TRANSLATION	protein_coding	-	CCDS20880.1	1	355	0	3.3	0.5	144.5	0	3,-2	-	-	11.964	PRINCIPAL:4
ENSMUSG00000040987	Mill2	ENSMUST00000228493	ENSMUSP00000154268	TRANSLATION	protein_coding	-	CCDS20880.1	-	355	0	3.3	0.5	144.5	0	3,-2	-	-	11.964	ALTERNATIVE:2
ENSMUSG00000040987	Mill2	ENSMUST00000227379	ENSMUSP00000154222	TRANSLATION	protein_coding	-	CCDS20879.1	-	340	0	3	0.5	145.1	0	3,-3	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000040987	Mill2	ENSMUST00000072415	ENSMUSP00000072246	TRANSLATION	protein_coding	-	CCDS20879.1	1	340	0	3	0.5	145.1	0	3,-3	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000030725	Lipt2	ENSMUST00000032967	ENSMUSP00000032967	TRANSLATION	protein_coding	-	CCDS21494.1	1	231	0	2.97	2.7	21.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030725	Lipt2	ENSMUST00000207825	ENSMUSP00000147056	TRANSLATION	protein_coding	start	-	5	68	0	0.32	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003363	Pld3	ENSMUST00000131106	ENSMUSP00000119228	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003363	Pld3	ENSMUST00000150964	ENSMUSP00000122897	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000003363	Pld3	ENSMUST00000127240	ENSMUSP00000115891	TRANSLATION	protein_coding	stop	-	5	103	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000003363	Pld3	ENSMUST00000155287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003363	Pld3	ENSMUST00000143903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003363	Pld3	ENSMUST00000117611	ENSMUSP00000112942	TRANSLATION	protein_coding	-	CCDS21025.1	1	488	0	0	7.5	97.7	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000003363	Pld3	ENSMUST00000142981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003363	Pld3	ENSMUST00000117095	ENSMUSP00000113820	TRANSLATION	protein_coding	-	CCDS21025.1	1	488	0	0	7.5	97.7	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031074	Fgf3	ENSMUST00000155320	ENSMUSP00000115205	TRANSLATION	protein_coding	stop	-	3	156	1	2.4	0	127.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031074	Fgf3	ENSMUST00000105898	ENSMUSP00000101518	TRANSLATION	protein_coding	-	CCDS22051.1	1	245	7	2.32	1.5	159.7	0	3,-2	-	-	17.802	PRINCIPAL:1
ENSMUSG00000063615	Olfr64	ENSMUST00000081748	ENSMUSP00000080444	TRANSLATION	protein_coding	-	CCDS40062.1	-	307	0	0.42	3.9	374.7	0	-1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000030866	Ern2	ENSMUST00000033153	ENSMUSP00000033153	TRANSLATION	protein_coding	-	CCDS21813.1	1	911	20	15.24	0.5	264.9	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000030866	Ern2	ENSMUST00000206198	ENSMUSP00000145716	TRANSLATION	nonsense_mediated_decay	-	-	1	819	20	13.49	0	129.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000078776	9530053A07Rik	ENSMUST00000059886	ENSMUSP00000056479	TRANSLATION	protein_coding	-	CCDS52160.1	5	2581	0	0	1.5	1482.8	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078776	9530053A07Rik	ENSMUST00000129051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078776	9530053A07Rik	ENSMUST00000130693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078776	9530053A07Rik	ENSMUST00000150948	ENSMUSP00000114986	TRANSLATION	protein_coding	-	CCDS52160.1	5	2581	0	0	1.5	1482.8	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030852	Tacc2	ENSMUST00000208661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030852	Tacc2	ENSMUST00000207230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030852	Tacc2	ENSMUST00000215492	ENSMUSP00000149733	TRANSLATION	protein_coding	stop	-	5	1770	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000207376	ENSMUSP00000147054	TRANSLATION	protein_coding	start	-	5	696	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000207282	ENSMUSP00000146848	TRANSLATION	protein_coding	-	CCDS85432.1	1	947	0	1.75	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030852	Tacc2	ENSMUST00000207918	ENSMUSP00000146419	TRANSLATION	protein_coding	stop	-	5	1919	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000208106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030852	Tacc2	ENSMUST00000084513	ENSMUSP00000081561	TRANSLATION	protein_coding	-	CCDS21903.1	5	2879	0	1.75	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000030852	Tacc2	ENSMUST00000208882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030852	Tacc2	ENSMUST00000207549	ENSMUSP00000146840	TRANSLATION	protein_coding	-	-	1	568	0	1.75	0.5	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000030852	Tacc2	ENSMUST00000207789	ENSMUSP00000146690	TRANSLATION	nonsense_mediated_decay	-	-	5	255	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000207395	ENSMUSP00000146915	TRANSLATION	protein_coding	start	-	1	829	0	1.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000207999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030852	Tacc2	ENSMUST00000209108	ENSMUSP00000146908	TRANSLATION	protein_coding	-	-	1	555	0	1	0	0	0	-4,-6	-	-	3.426	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000208722	ENSMUSP00000146718	TRANSLATION	nonsense_mediated_decay	-	-	5	1020	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000059145	ENSMUSP00000061242	TRANSLATION	protein_coding	-	CCDS21904.1	5	1146	0	1.75	0.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000030852	Tacc2	ENSMUST00000239258	ENSMUSP00000159277	TRANSLATION	protein_coding	stop	-	-	669	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030852	Tacc2	ENSMUST00000033141	ENSMUSP00000033141	TRANSLATION	protein_coding	-	CCDS21905.1	5	1036	0	1.75	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000030852	Tacc2	ENSMUST00000208743	ENSMUSP00000147134	TRANSLATION	nonsense_mediated_decay	-	-	1	910	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096209	Olfr510	ENSMUST00000213979	ENSMUSP00000149237	TRANSLATION	protein_coding	-	CCDS21724.1	5	314	0	0	2.7	166.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096209	Olfr510	ENSMUST00000076289	ENSMUSP00000075637	TRANSLATION	protein_coding	-	CCDS21724.1	-	314	0	0	2.7	166.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096209	Olfr510	ENSMUST00000217170	ENSMUSP00000149693	TRANSLATION	protein_coding	-	CCDS21724.1	5	314	0	0	2.7	166.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096209	Olfr510	ENSMUST00000216331	ENSMUSP00000149492	TRANSLATION	protein_coding	-	CCDS21724.1	5	314	0	0	2.7	166.9	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035585	Tsen34	ENSMUST00000147288	ENSMUSP00000145563	TRANSLATION	protein_coding	start/stop	-	5	109	2	1.2	0	44.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000123088	ENSMUSP00000123614	TRANSLATION	protein_coding	stop	-	2	150	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000155060	ENSMUSP00000118816	TRANSLATION	nonsense_mediated_decay	-	-	3	167	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000108629	ENSMUSP00000104269	TRANSLATION	protein_coding	-	CCDS51966.1	1	287	1	1.6	0.5	30.6	0	-4,-6	-	-	7.299	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000108630	ENSMUSP00000104270	TRANSLATION	protein_coding	-	CCDS20725.1	1	316	3	2.5	1.5	74.6	0	-4,-6	-	-	15.244	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000139396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035585	Tsen34	ENSMUST00000205287	ENSMUSP00000145965	TRANSLATION	protein_coding	-	-	5	295	1	0.8	0	32.5	0	-4,-6	-	-	5.535	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000038521	ENSMUSP00000046911	TRANSLATION	protein_coding	-	-	5	312	3	2.5	5.1	74.6	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000035585	Tsen34	ENSMUST00000205734	ENSMUSP00000145687	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000108627	ENSMUSP00000104267	TRANSLATION	protein_coding	-	CCDS20725.1	1	316	3	2.5	1.5	74.6	0	-4,-6	-	-	15.244	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000137204	ENSMUSP00000120403	TRANSLATION	protein_coding	stop	-	2	143	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035585	Tsen34	ENSMUST00000142713	ENSMUSP00000118440	TRANSLATION	protein_coding	stop	-	2	158	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054083	Capn12	ENSMUST00000208299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054083	Capn12	ENSMUST00000066880	ENSMUSP00000069055	TRANSLATION	protein_coding	-	CCDS52166.1	5	720	10	13.068	5.1	503.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000054083	Capn12	ENSMUST00000208238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000145802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000137196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030691	Fchsd2	ENSMUST00000142727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030691	Fchsd2	ENSMUST00000130426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000208063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000208638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000032931	ENSMUSP00000032931	TRANSLATION	protein_coding	-	CCDS52327.1	1	764	0	8.356	9.1	166.5	0	-4,-7	-	-	14.859	PRINCIPAL:4
ENSMUSG00000030691	Fchsd2	ENSMUST00000098250	ENSMUSP00000095850	TRANSLATION	protein_coding	-	CCDS52328.1	1	740	0	7.906	9.5	166.5	0	-4,-7	-	-	14.1	ALTERNATIVE:1
ENSMUSG00000030691	Fchsd2	ENSMUST00000208439	ENSMUSP00000146962	TRANSLATION	protein_coding	stop	-	5	179	0	1.8	0	79.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030691	Fchsd2	ENSMUST00000151693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030691	Fchsd2	ENSMUST00000208917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053898	Ech1	ENSMUST00000154839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053898	Ech1	ENSMUST00000124017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053898	Ech1	ENSMUST00000132376	ENSMUSP00000116992	TRANSLATION	protein_coding	start	-	5	177	4	5	0	80.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053898	Ech1	ENSMUST00000066264	ENSMUSP00000066092	TRANSLATION	protein_coding	-	CCDS21057.1	1	327	15	7.83	1.5	163.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000053898	Ech1	ENSMUST00000143708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053898	Ech1	ENSMUST00000137834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053898	Ech1	ENSMUST00000127590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080891	Olfr587-ps1	ENSMUST00000209201	ENSMUSP00000148048	TRANSLATION	protein_coding	start/stop	-	-	159	0	0	0	223	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000080891	Olfr587-ps1	ENSMUST00000118378	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000078765	U2af1l4	ENSMUST00000165009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000171364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000163276	ENSMUSP00000127233	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000163654	ENSMUSP00000131048	TRANSLATION	protein_coding	-	-	2	188	5	5.546	0	60.8	0	-4,-5	-	-	11.814	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000168555	ENSMUSP00000131654	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000165773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000168222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000168931	ENSMUSP00000129697	TRANSLATION	protein_coding	stop	-	3	119	3	4.15	0	32.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000167361	ENSMUSP00000146834	TRANSLATION	protein_coding	-	-	2	122	4	2.896	0	51	0	-4,-5	-	-	6.408	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000166257	ENSMUSP00000125838	TRANSLATION	protein_coding	-	-	5	181	8	5.136	2.4	89.8	0	-4,-5	-	-	15.698	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000171850	ENSMUSP00000131781	TRANSLATION	protein_coding	-	-	5	187	8	5.386	0	57.6	0	-4,-5	-	-	13.524	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000164365	ENSMUSP00000131193	TRANSLATION	nonsense_mediated_decay	start	-	5	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000169911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000163330	ENSMUSP00000129385	TRANSLATION	protein_coding	stop	-	3	105	4	2.896	0	51	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000043273	ENSMUSP00000039406	TRANSLATION	protein_coding	-	CCDS21100.1	1	220	8	6.546	6.4	88.6	0	-4,-5	-	-	19.922	PRINCIPAL:1
ENSMUSG00000078765	U2af1l4	ENSMUST00000170453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000165524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000166510	ENSMUSP00000132316	TRANSLATION	protein_coding	-	-	5	210	8	6.216	0	88.6	0	-4,-5	-	-	17.262	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000168333	ENSMUSP00000128950	TRANSLATION	nonsense_mediated_decay	-	-	5	102	4	3.386	0	31.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000165722	ENSMUSP00000125790	TRANSLATION	nonsense_mediated_decay	start	-	5	53	4	1.83	0	31.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000167202	ENSMUSP00000146344	TRANSLATION	protein_coding	stop	-	3	120	3	3.32	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000165543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000163482	ENSMUSP00000130649	TRANSLATION	protein_coding	-	-	5	55	0	0.066	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000167024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000166960	ENSMUSP00000146831	TRANSLATION	protein_coding	-	-	3	90	1	1.896	0	23.2	0	-4,-5	-	-	2.298	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000169962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000169283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000166864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078765	U2af1l4	ENSMUST00000168229	ENSMUSP00000132915	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000163464	ENSMUSP00000125959	TRANSLATION	protein_coding	-	-	5	216	6	6.546	5.1	60.8	0	-4,-5	-	-	16.08	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000164438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000169071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078765	U2af1l4	ENSMUST00000167501	ENSMUSP00000129102	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078765	U2af1l4	ENSMUST00000163848	ENSMUSP00000132536	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000125220	ENSMUSP00000146089	TRANSLATION	nonsense_mediated_decay	start	-	1	102	0	1.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000124248	ENSMUSP00000120029	TRANSLATION	protein_coding	start	-	5	704	0	5.6	0	209.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000136863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000147679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000153101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000013886	ENSMUSP00000013886	TRANSLATION	protein_coding	-	CCDS39735.1	1	782	0	6.3	1.5	209.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000133374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000134738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000145689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000154710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019254	Ppp1r12c	ENSMUST00000127329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049848	Ceacam19	ENSMUST00000052605	ENSMUSP00000057433	TRANSLATION	protein_coding	-	CCDS20915.1	1	271	0	0.6	0.5	30.1	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000054662	Ano9	ENSMUST00000210085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054662	Ano9	ENSMUST00000211515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054662	Ano9	ENSMUST00000210496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054662	Ano9	ENSMUST00000210927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054662	Ano9	ENSMUST00000067836	ENSMUSP00000067689	TRANSLATION	protein_coding	-	CCDS52438.1	5	747	0	1.995	1.5	446.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054662	Ano9	ENSMUST00000210763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096916	Zfp850	ENSMUST00000180024	ENSMUSP00000137192	TRANSLATION	protein_coding	-	CCDS57531.1	5	689	70	1.2	0.5	393	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096916	Zfp850	ENSMUST00000180502	ENSMUSP00000141063	TRANSLATION	protein_coding	-	CCDS57531.1	3	689	70	1.2	0.5	393	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096916	Zfp850	ENSMUST00000099111	ENSMUSP00000096711	TRANSLATION	protein_coding	-	-	-	140	3	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038801	Scgb1c1	ENSMUST00000035300	ENSMUSP00000048722	TRANSLATION	protein_coding	-	CCDS40176.1	2	95	0	0	3.9	52.5	0	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000025482	Odf3	ENSMUST00000026555	ENSMUSP00000026555	TRANSLATION	protein_coding	-	CCDS40177.1	1	254	0	0	7.5	62.1	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000025482	Odf3	ENSMUST00000106049	ENSMUSP00000101664	TRANSLATION	protein_coding	-	-	5	280	0	0	0	62.1	0	-4,-7	-	-	6	MINOR
ENSMUSG00000025482	Odf3	ENSMUST00000135845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003271	Sult2b1	ENSMUST00000210754	ENSMUSP00000148064	TRANSLATION	protein_coding	-	-	1	372	20	5.92	0.5	273.8	0	-4,-5	-	-	17.52	ALTERNATIVE:2
ENSMUSG00000003271	Sult2b1	ENSMUST00000210021	-	NO_TRANSLATION	TEC
ENSMUSG00000003271	Sult2b1	ENSMUST00000209435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003271	Sult2b1	ENSMUST00000211779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003271	Sult2b1	ENSMUST00000210147	ENSMUSP00000147564	TRANSLATION	protein_coding	stop	-	3	130	7	2	0	61.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003271	Sult2b1	ENSMUST00000075571	ENSMUSP00000075005	TRANSLATION	protein_coding	-	CCDS21263.1	1	338	20	6.16	1.5	273.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000003271	Sult2b1	ENSMUST00000209464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003271	Sult2b1	ENSMUST00000209739	ENSMUSP00000147374	TRANSLATION	protein_coding	-	-	5	370	20	6	0	273.8	0	-4,-6	-	-	17.682	ALTERNATIVE:2
ENSMUSG00000030470	Csrp3	ENSMUST00000167786	ENSMUSP00000129378	TRANSLATION	protein_coding	-	CCDS21305.1	1	194	16	5.1	10.8	106.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030470	Csrp3	ENSMUST00000208146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030470	Csrp3	ENSMUST00000208050	ENSMUSP00000146360	TRANSLATION	protein_coding	stop	-	3	65	8	1.75	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030470	Csrp3	ENSMUST00000032658	ENSMUSP00000032658	TRANSLATION	protein_coding	-	CCDS21305.1	1	194	16	5.1	10.8	106.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030494	Rhpn2	ENSMUST00000155140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030494	Rhpn2	ENSMUST00000032705	ENSMUSP00000032705	TRANSLATION	protein_coding	-	CCDS21148.1	1	686	0	5.6	6.4	349.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030494	Rhpn2	ENSMUST00000085556	ENSMUSP00000082692	TRANSLATION	protein_coding	-	CCDS21148.1	1	686	0	5.6	6.4	349.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000030494	Rhpn2	ENSMUST00000187997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030600	Lrfn1	ENSMUST00000055110	ENSMUSP00000057645	TRANSLATION	protein_coding	-	CCDS21045.1	5	492	0	1.02	0.5	158	0	1,-1	-	-	10.17	MINOR
ENSMUSG00000030600	Lrfn1	ENSMUST00000190954	ENSMUSP00000140537	TRANSLATION	protein_coding	stop	-	2	209	0	0.6	0	95.3	0	1,-1	-	-	-1	MINOR
ENSMUSG00000030600	Lrfn1	ENSMUST00000108288	ENSMUSP00000103923	TRANSLATION	protein_coding	-	CCDS52163.1	1	766	0	1.02	1.5	188.5	0	1,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030600	Lrfn1	ENSMUST00000191267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030600	Lrfn1	ENSMUST00000189877	ENSMUSP00000139609	TRANSLATION	protein_coding	-	CCDS21045.1	5	492	0	1.02	0.5	158	0	1,-1	-	-	10.17	MINOR
ENSMUSG00000070563	Spaca4	ENSMUST00000094424	ENSMUSP00000091991	TRANSLATION	protein_coding	-	CCDS21262.1	-	127	0	0	1.5	23.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045780	Olfr624	ENSMUST00000062144	ENSMUSP00000049938	TRANSLATION	protein_coding	-	CCDS21585.1	-	308	0	0.36	0.5	456.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000226874	ENSMUSP00000154058	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000228248	ENSMUSP00000154420	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000227940	ENSMUSP00000154234	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000079113	ENSMUSP00000078116	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000228374	ENSMUSP00000154714	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000227003	ENSMUSP00000154108	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000228098	ENSMUSP00000154381	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000227702	ENSMUSP00000154115	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059206	Vmn1r71	ENSMUST00000228561	ENSMUSP00000153870	TRANSLATION	protein_coding	-	-	-	241	0	0	0	88.5	4	-4,-6	-	-	5.712	MINOR
ENSMUSG00000059206	Vmn1r71	ENSMUST00000228526	ENSMUSP00000154779	TRANSLATION	protein_coding	-	CCDS20796.1	-	307	0	0	1.5	93	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000012848	Rps5	ENSMUST00000147435	ENSMUSP00000118798	TRANSLATION	protein_coding	stop	-	5	182	0	4	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012848	Rps5	ENSMUST00000137329	ENSMUSP00000121961	TRANSLATION	protein_coding	stop	-	5	189	0	4.33	0	104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012848	Rps5	ENSMUST00000139349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012848	Rps5	ENSMUST00000131795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012848	Rps5	ENSMUST00000004554	ENSMUSP00000004554	TRANSLATION	protein_coding	-	CCDS20817.1	1	204	0	4.83	14.2	127.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000012848	Rps5	ENSMUST00000108539	ENSMUSP00000104179	TRANSLATION	protein_coding	-	CCDS20817.1	2	204	0	4.83	14.2	127.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030979	Uros	ENSMUST00000106146	ENSMUSP00000101752	TRANSLATION	protein_coding	-	CCDS21934.1	5	265	0	7.58	11.5	144.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030979	Uros	ENSMUST00000153698	ENSMUSP00000117187	TRANSLATION	protein_coding	stop	-	2	49	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030979	Uros	ENSMUST00000209636	ENSMUSP00000147433	TRANSLATION	protein_coding	stop	-	5	59	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030979	Uros	ENSMUST00000135760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030979	Uros	ENSMUST00000124759	ENSMUSP00000119179	TRANSLATION	protein_coding	stop	-	5	31	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030979	Uros	ENSMUST00000033276	ENSMUSP00000033276	TRANSLATION	protein_coding	-	CCDS21934.1	1	265	0	7.58	11.5	144.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030979	Uros	ENSMUST00000144789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030979	Uros	ENSMUST00000151348	ENSMUSP00000121763	TRANSLATION	protein_coding	stop	-	3	30	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030979	Uros	ENSMUST00000106145	ENSMUSP00000101751	TRANSLATION	protein_coding	-	CCDS21934.1	1	265	0	7.58	11.5	144.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000030979	Uros	ENSMUST00000106144	ENSMUSP00000101750	TRANSLATION	protein_coding	-	CCDS80823.1	1	188	0	4.08	0.5	59.9	0	-4,-5	-	-	0.906	MINOR
ENSMUSG00000030368	Ceacam11	ENSMUST00000094799	ENSMUSP00000092393	TRANSLATION	protein_coding	-	CCDS20865.1	1	303	0	1.24	0.5	30.1	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005621	Zfp592	ENSMUST00000149508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005621	Zfp592	ENSMUST00000176477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005621	Zfp592	ENSMUST00000107353	ENSMUSP00000102976	TRANSLATION	protein_coding	-	CCDS40003.2	1	1262	36	1.14	0.5	98	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005621	Zfp592	ENSMUST00000125137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048191	Muc6	ENSMUST00000062451	ENSMUSP00000049941	TRANSLATION	protein_coding	-	-	5	2853	0	2.76	0	534.7	0	2,-2	-	-	10.782	MINOR
ENSMUSG00000048191	Muc6	ENSMUST00000190907	ENSMUSP00000140483	TRANSLATION	protein_coding	-	-	5	2918	0	2.76	0	534.7	0	2,-2	-	-	10.782	MINOR
ENSMUSG00000048191	Muc6	ENSMUST00000189314	ENSMUSP00000140388	TRANSLATION	protein_coding	-	-	1	1437	0	2.76	0	555	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030732	Chrdl2	ENSMUST00000207641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030732	Chrdl2	ENSMUST00000107084	ENSMUSP00000102699	TRANSLATION	protein_coding	-	CCDS80755.1	1	433	4	0.48	0.5	114.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000030732	Chrdl2	ENSMUST00000144808	ENSMUSP00000120760	TRANSLATION	protein_coding	start	-	5	221	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030732	Chrdl2	ENSMUST00000032977	ENSMUSP00000032977	TRANSLATION	protein_coding	-	CCDS21492.1	1	426	4	0.48	1.5	114.1	0	3,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000078624	Olfr613	ENSMUST00000106888	ENSMUSP00000102501	TRANSLATION	protein_coding	-	CCDS40056.1	-	317	0	0.28	1.5	329.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000078624	Olfr613	ENSMUST00000214173	ENSMUSP00000149332	TRANSLATION	protein_coding	-	CCDS40056.1	5	317	0	0.28	1.5	329.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066828	Vmn2r37	ENSMUST00000072787	ENSMUSP00000072566	TRANSLATION	protein_coding	-	CCDS57490.1	1	802	0	2.8	0.5	360.9	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000045251	Zfp688	ENSMUST00000129038	ENSMUSP00000146001	TRANSLATION	nonsense_mediated_decay	start	-	2	80	0	1.1	0	75.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045251	Zfp688	ENSMUST00000135886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045251	Zfp688	ENSMUST00000148483	ENSMUSP00000145670	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	1.1	0	75.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045251	Zfp688	ENSMUST00000126756	ENSMUSP00000119731	TRANSLATION	protein_coding	start/stop	-	2	113	3	0.78	0	25.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045251	Zfp688	ENSMUST00000136123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045251	Zfp688	ENSMUST00000106300	ENSMUSP00000101907	TRANSLATION	protein_coding	-	CCDS21866.2	2	274	8	1.98	1.5	117.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030660	Pik3c2a	ENSMUST00000206385	ENSMUSP00000145690	TRANSLATION	nonsense_mediated_decay	start	-	1	448	17	7.88	0	291.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030660	Pik3c2a	ENSMUST00000205767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030660	Pik3c2a	ENSMUST00000206805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030660	Pik3c2a	ENSMUST00000206219	ENSMUSP00000146181	TRANSLATION	protein_coding	-	CCDS52371.1	5	1686	17	18.29	5.1	653.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000030660	Pik3c2a	ENSMUST00000206248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030660	Pik3c2a	ENSMUST00000205378	ENSMUSP00000145572	TRANSLATION	nonsense_mediated_decay	-	-	1	364	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030660	Pik3c2a	ENSMUST00000170430	ENSMUSP00000126092	TRANSLATION	protein_coding	-	CCDS52371.1	5	1686	17	18.29	5.1	653.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000031029	Eif3f	ENSMUST00000147369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031029	Eif3f	ENSMUST00000153596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031029	Eif3f	ENSMUST00000033342	ENSMUSP00000033342	TRANSLATION	protein_coding	-	CCDS21731.1	1	361	0	7.25	0.5	179.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061479	Snrpa	ENSMUST00000206439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061479	Snrpa	ENSMUST00000126211	ENSMUSP00000115335	TRANSLATION	protein_coding	stop	-	2	247	0	5.5	0	66.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061479	Snrpa	ENSMUST00000080356	ENSMUSP00000079228	TRANSLATION	protein_coding	-	CCDS21014.1	1	287	0	6.5	0.5	97.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061479	Snrpa	ENSMUST00000141378	ENSMUSP00000119818	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061479	Snrpa	ENSMUST00000163311	ENSMUSP00000131897	TRANSLATION	protein_coding	-	CCDS21014.1	2	287	0	6.5	0.5	97.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061479	Snrpa	ENSMUST00000122202	ENSMUSP00000113678	TRANSLATION	protein_coding	-	CCDS21014.1	1	287	0	6.5	0.5	97.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061479	Snrpa	ENSMUST00000148491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096593	Vmn2r54	ENSMUST00000233287	ENSMUSP00000156708	TRANSLATION	protein_coding	-	-	-	878	7	3.62	0	458.1	7	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000096593	Vmn2r54	ENSMUST00000086210	ENSMUSP00000083386	TRANSLATION	protein_coding	-	CCDS52019.1	5	806	7	3.42	0.5	458.1	7	-4,-6	-	-	17.598	PRINCIPAL:2
ENSMUSG00000042918	Mamstr	ENSMUST00000210169	ENSMUSP00000147269	TRANSLATION	protein_coding	start	-	2	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042918	Mamstr	ENSMUST00000210988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042918	Mamstr	ENSMUST00000210213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042918	Mamstr	ENSMUST00000210648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042918	Mamstr	ENSMUST00000148532	ENSMUSP00000114686	TRANSLATION	protein_coding	-	CCDS21257.2	1	421	0	0.6	0.5	36.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000042918	Mamstr	ENSMUST00000210957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031090	Nadsyn1	ENSMUST00000155088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031090	Nadsyn1	ENSMUST00000143210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031090	Nadsyn1	ENSMUST00000156638	ENSMUSP00000114889	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031090	Nadsyn1	ENSMUST00000132520	ENSMUSP00000114380	TRANSLATION	nonsense_mediated_decay	-	-	5	569	14	8.8932	0	171.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031090	Nadsyn1	ENSMUST00000143366	ENSMUSP00000115857	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031090	Nadsyn1	ENSMUST00000142749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031090	Nadsyn1	ENSMUST00000156779	ENSMUSP00000120220	TRANSLATION	protein_coding	stop	-	5	102	2	2.45	0	28.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031090	Nadsyn1	ENSMUST00000033415	ENSMUSP00000033415	TRANSLATION	protein_coding	-	CCDS22047.1	1	725	14	10.4232	1.5	171.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000069806	Cacng7	ENSMUST00000092891	ENSMUSP00000090567	TRANSLATION	protein_coding	-	CCDS39725.1	1	275	0	2.12	9.7	74.9	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000069806	Cacng7	ENSMUST00000203497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025510	Cd151	ENSMUST00000210308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025510	Cd151	ENSMUST00000211522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025510	Cd151	ENSMUST00000211071	ENSMUSP00000148013	TRANSLATION	protein_coding	stop	-	2	139	0	1.75	0	99.1	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000025510	Cd151	ENSMUST00000058746	ENSMUSP00000061636	TRANSLATION	protein_coding	-	CCDS22017.1	1	253	0	2.315	18.2	186.1	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025510	Cd151	ENSMUST00000209988	ENSMUSP00000147510	TRANSLATION	protein_coding	stop	-	3	150	0	1.795	0	102.4	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000025510	Cd151	ENSMUST00000209698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025510	Cd151	ENSMUST00000209892	ENSMUSP00000147978	TRANSLATION	protein_coding	stop	-	3	202	0	1.835	0	149.8	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000025510	Cd151	ENSMUST00000106000	ENSMUSP00000101622	TRANSLATION	protein_coding	-	CCDS22017.1	5	253	0	2.315	18.2	186.1	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025510	Cd151	ENSMUST00000210058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025510	Cd151	ENSMUST00000177840	ENSMUSP00000136331	TRANSLATION	protein_coding	-	CCDS22017.1	5	253	0	2.315	18.2	186.1	8	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000070796	Psg21	ENSMUST00000182228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070796	Psg21	ENSMUST00000182128	ENSMUSP00000138173	TRANSLATION	protein_coding	-	-	1	379	0	2.24	0	114.3	0	0,-3	-	-	7.656	MINOR
ENSMUSG00000070796	Psg21	ENSMUST00000094793	ENSMUSP00000092387	TRANSLATION	protein_coding	-	CCDS20875.1	1	471	0	3.24	0.5	153.4	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070796	Psg21	ENSMUST00000182933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002602	Axl	ENSMUST00000147680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002602	Axl	ENSMUST00000132989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002602	Axl	ENSMUST00000132038	ENSMUSP00000114907	TRANSLATION	protein_coding	start/stop	-	3	188	9	1.6	0	21.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000002602	Axl	ENSMUST00000137211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002602	Axl	ENSMUST00000137383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002602	Axl	ENSMUST00000124442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002602	Axl	ENSMUST00000002677	ENSMUSP00000002677	TRANSLATION	protein_coding	-	CCDS20996.1	1	888	20	10.75	2.7	430.4	2	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000002602	Axl	ENSMUST00000085948	ENSMUSP00000083110	TRANSLATION	protein_coding	-	CCDS57528.1	1	879	20	10.75	2.7	430.4	2	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000025475	Adgra1	ENSMUST00000137584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025475	Adgra1	ENSMUST00000026548	ENSMUSP00000026548	TRANSLATION	protein_coding	-	CCDS40171.1	1	578	0	0	0.5	51.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025475	Adgra1	ENSMUST00000129454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002983	Relb	ENSMUST00000094762	ENSMUSP00000092355	TRANSLATION	protein_coding	-	CCDS39799.1	1	558	0	6.8	1.5	478.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000002983	Relb	ENSMUST00000131759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002983	Relb	ENSMUST00000137615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002983	Relb	ENSMUST00000141586	ENSMUSP00000146643	TRANSLATION	protein_coding	stop	-	5	116	0	1.75	0	90.5	0	-3,1	-	-	-1	MINOR
ENSMUSG00000002983	Relb	ENSMUST00000148040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002983	Relb	ENSMUST00000049912	ENSMUSP00000050166	TRANSLATION	protein_coding	-	CCDS71896.1	1	555	0	6.8	1.5	463.3	0	-4,-7	-	-	11.082	ALTERNATIVE:2
ENSMUSG00000002983	Relb	ENSMUST00000130543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002983	Relb	ENSMUST00000208087	ENSMUSP00000147172	TRANSLATION	nonsense_mediated_decay	-	-	1	147	0	1	0	204.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002983	Relb	ENSMUST00000098754	ENSMUSP00000096350	TRANSLATION	protein_coding	-	-	5	558	0	6.8	1.5	478.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000002983	Relb	ENSMUST00000153309	ENSMUSP00000146669	TRANSLATION	protein_coding	stop	-	3	138	0	2.5	0	125.8	0	-3,1	-	-	-1	MINOR
ENSMUSG00000043831	Lysmd4	ENSMUST00000208698	ENSMUSP00000146624	TRANSLATION	protein_coding	-	-	2	94	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000179106	ENSMUSP00000136151	TRANSLATION	protein_coding	-	-	2	94	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000208998	ENSMUSP00000146557	TRANSLATION	protein_coding	-	CCDS21350.1	1	293	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000058771	ENSMUSP00000053341	TRANSLATION	protein_coding	-	CCDS21350.1	1	293	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000207823	ENSMUSP00000147179	TRANSLATION	protein_coding	-	-	2	94	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000208569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043831	Lysmd4	ENSMUST00000208213	ENSMUSP00000146421	TRANSLATION	nonsense_mediated_decay	-	-	2	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043831	Lysmd4	ENSMUST00000207757	ENSMUSP00000147084	TRANSLATION	protein_coding	-	-	3	94	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043831	Lysmd4	ENSMUST00000208512	ENSMUSP00000146860	TRANSLATION	nonsense_mediated_decay	-	-	2	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062732	Lypd4	ENSMUST00000122995	ENSMUSP00000122913	TRANSLATION	protein_coding	stop	-	5	129	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000062732	Lypd4	ENSMUST00000079306	ENSMUSP00000078287	TRANSLATION	protein_coding	-	CCDS20964.1	1	246	0	0	1.5	75.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000030707	Coro1a	ENSMUST00000140896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030707	Coro1a	ENSMUST00000205515	ENSMUSP00000146177	TRANSLATION	protein_coding	stop	-	5	246	0	5.58	0	143.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030707	Coro1a	ENSMUST00000133718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030707	Coro1a	ENSMUST00000126193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030707	Coro1a	ENSMUST00000032949	ENSMUSP00000032949	TRANSLATION	protein_coding	-	CCDS21840.1	1	461	0	10.08	8.8	348.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000030707	Coro1a	ENSMUST00000173116	ENSMUSP00000133555	TRANSLATION	protein_coding	stop	-	3	113	0	2.33	0	137.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030707	Coro1a	ENSMUST00000174579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030707	Coro1a	ENSMUST00000135087	ENSMUSP00000115960	TRANSLATION	protein_coding	stop	-	2	116	0	2.33	0	137.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030707	Coro1a	ENSMUST00000123511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030707	Coro1a	ENSMUST00000131415	ENSMUSP00000117931	TRANSLATION	protein_coding	stop	-	3	233	0	5.08	0	176.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030707	Coro1a	ENSMUST00000173108	ENSMUSP00000134123	TRANSLATION	protein_coding	-	-	5	389	0	9.08	0	266.5	0	-4,-2	-	-	5.07	MINOR
ENSMUSG00000030707	Coro1a	ENSMUST00000106364	ENSMUSP00000101972	TRANSLATION	protein_coding	-	CCDS21840.1	1	461	0	10.08	8.8	348.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000055809	Dnaaf3	ENSMUST00000094897	ENSMUSP00000092498	TRANSLATION	protein_coding	-	CCDS20737.1	1	586	0	0	1.5	421.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058200	Olfr66	ENSMUST00000216303	ENSMUSP00000149058	TRANSLATION	protein_coding	-	CCDS21594.1	5	311	0	0.42	6.4	374	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058200	Olfr66	ENSMUST00000079117	ENSMUSP00000078119	TRANSLATION	protein_coding	-	CCDS21594.1	-	311	0	0.42	6.4	374	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019082	Slc25a22	ENSMUST00000132635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000153190	ENSMUSP00000144686	TRANSLATION	protein_coding	start	-	3	99	0	1.1886	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000202840	ENSMUSP00000144384	TRANSLATION	protein_coding	stop	-	3	85	0	2.158	0	80.5	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000140602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000144174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000184518	ENSMUSP00000138924	TRANSLATION	nonsense_mediated_decay	-	-	5	98	0	2.458	0	89.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000106006	ENSMUSP00000101628	TRANSLATION	protein_coding	-	-	5	229	0	4.5966	1	170.9	5	-4,-7	-	-	7.242	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000106007	ENSMUSP00000101629	TRANSLATION	protein_coding	-	CCDS22013.1	1	323	0	5.7226	3.9	212.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000019082	Slc25a22	ENSMUST00000201127	ENSMUSP00000143911	TRANSLATION	protein_coding	stop	-	5	196	0	2.9166	0	117.1	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000201710	ENSMUSP00000144231	TRANSLATION	protein_coding	-	CCDS22013.1	5	323	0	5.7226	3.9	212.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000019082	Slc25a22	ENSMUST00000201708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000174095	ENSMUSP00000134355	TRANSLATION	protein_coding	start	-	1	44	0	0.862	0	0	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000136354	ENSMUSP00000118948	TRANSLATION	protein_coding	stop	-	2	206	0	3.4466	0	146.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000201558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000201072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019082	Slc25a22	ENSMUST00000133021	ENSMUSP00000133503	TRANSLATION	protein_coding	stop	-	5	38	0	0.798	0	39	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000133206	ENSMUSP00000138847	TRANSLATION	protein_coding	stop	-	5	18	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000124266	ENSMUSP00000122177	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	2.458	0	89.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000156002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000201822	ENSMUSP00000144213	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	1.858	0	66.6	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000138865	ENSMUSP00000120721	TRANSLATION	protein_coding	stop	-	5	222	0	3.7106	0	149	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000148100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019082	Slc25a22	ENSMUST00000172654	ENSMUSP00000133928	TRANSLATION	protein_coding	stop	-	5	63	0	1.33	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000150026	ENSMUSP00000133936	TRANSLATION	protein_coding	stop	-	3	28	0	0.798	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019082	Slc25a22	ENSMUST00000019226	ENSMUSP00000019226	TRANSLATION	protein_coding	-	CCDS22013.1	1	323	0	5.7226	3.9	212.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000030399	Ckm	ENSMUST00000208079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030399	Ckm	ENSMUST00000208710	ENSMUSP00000146972	TRANSLATION	protein_coding	-	CCDS20902.1	1	381	23	7	15.5	384.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030399	Ckm	ENSMUST00000003643	ENSMUSP00000003643	TRANSLATION	protein_coding	-	-	5	312	23	6	2.2	309.6	0	-4,-5	-	-	11.816	MINOR
ENSMUSG00000038738	Shank1	ENSMUST00000107935	ENSMUSP00000103568	TRANSLATION	protein_coding	-	-	5	2159	3	11.914	1.5	279.3	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000038738	Shank1	ENSMUST00000134470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038738	Shank1	ENSMUST00000127164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038738	Shank1	ENSMUST00000107938	ENSMUSP00000103571	TRANSLATION	protein_coding	-	CCDS52229.1	5	2167	3	11.914	1.5	279.3	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000038738	Shank1	ENSMUST00000107934	ENSMUSP00000103567	TRANSLATION	protein_coding	-	-	5	2158	3	11.65	1.5	279.3	0	-4,-5	-	-	14.472	ALTERNATIVE:2
ENSMUSG00000038738	Shank1	ENSMUST00000154776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000148951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000205971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030428	Ttyh1	ENSMUST00000206869	ENSMUSP00000146131	TRANSLATION	protein_coding	-	-	1	354	0	0	0	457.7	6	-4,-5	-	-	0.306	MINOR
ENSMUSG00000030428	Ttyh1	ENSMUST00000126971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000148760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030428	Ttyh1	ENSMUST00000151959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030428	Ttyh1	ENSMUST00000206987	ENSMUSP00000146170	TRANSLATION	nonsense_mediated_decay	-	-	3	108	0	0	0	71.5	3	-4,0	-	-	-1	MINOR
ENSMUSG00000030428	Ttyh1	ENSMUST00000139789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000134536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000132400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000140637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000032594	ENSMUSP00000032594	TRANSLATION	nonsense_mediated_decay	start	-	1	103	0	0	0	51.9	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000030428	Ttyh1	ENSMUST00000119661	ENSMUSP00000113937	TRANSLATION	protein_coding	-	CCDS20730.1	1	450	0	0	7.5	552.6	10	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000030428	Ttyh1	ENSMUST00000128317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030428	Ttyh1	ENSMUST00000130150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030428	Ttyh1	ENSMUST00000129423	ENSMUSP00000120182	TRANSLATION	protein_coding	-	CCDS20730.1	1	450	0	0	7.5	552.6	10	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000030428	Ttyh1	ENSMUST00000153673	ENSMUSP00000115623	TRANSLATION	nonsense_mediated_decay	-	-	5	113	0	0	0	72.6	3	-4,0	-	-	-1	MINOR
ENSMUSG00000030428	Ttyh1	ENSMUST00000079415	ENSMUSP00000078384	TRANSLATION	protein_coding	-	CCDS51970.1	1	460	0	0	0.5	540.9	10	-4,0	-	-	5.298	MINOR
ENSMUSG00000002992	Apoc2	ENSMUST00000142352	ENSMUSP00000115173	TRANSLATION	protein_coding	-	CCDS39801.1	1	97	0	1.75	6.3	132.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000002992	Apoc2	ENSMUST00000003074	ENSMUSP00000003074	TRANSLATION	protein_coding	-	CCDS39801.1	1	97	0	1.75	6.3	132.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000002992	Apoc2	ENSMUST00000134116	ENSMUSP00000118291	TRANSLATION	protein_coding	-	CCDS39801.1	3	97	0	1.75	6.3	132.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000054594	Oscar	ENSMUST00000039507	ENSMUSP00000041306	TRANSLATION	protein_coding	-	CCDS20718.1	1	271	0	2.2	0.5	37.3	1	1,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000054594	Oscar	ENSMUST00000108645	ENSMUSP00000104285	TRANSLATION	protein_coding	-	CCDS71872.1	1	265	0	2.2	0.5	37.3	1	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000054594	Oscar	ENSMUST00000148645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054594	Oscar	ENSMUST00000148012	ENSMUSP00000123672	TRANSLATION	protein_coding	-	-	5	254	0	2.2	0	37.3	1	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000051207	Mrgprd	ENSMUST00000062163	ENSMUSP00000063021	TRANSLATION	protein_coding	-	CCDS22057.1	1	321	0	0.36	0.5	41.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045340	Vmn1r70	ENSMUST00000226182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045340	Vmn1r70	ENSMUST00000055847	ENSMUSP00000054445	TRANSLATION	protein_coding	-	CCDS20794.1	-	298	0	0	0.5	103	5	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000045340	Vmn1r70	ENSMUST00000226255	ENSMUSP00000154041	TRANSLATION	protein_coding	-	CCDS20794.1	-	298	0	0	0.5	103	5	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000045340	Vmn1r70	ENSMUST00000228090	ENSMUSP00000154793	TRANSLATION	protein_coding	-	-	-	279	0	0	0	103	4	1,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000091811	Inafm1	ENSMUST00000169612	ENSMUSP00000127027	TRANSLATION	protein_coding	-	CCDS52038.1	-	130	0	0	1.5	52.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058975	Kcnc1	ENSMUST00000160433	ENSMUSP00000124938	TRANSLATION	protein_coding	-	CCDS52252.1	1	585	0	1.7	14.8	248.7	3	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000058975	Kcnc1	ENSMUST00000025202	ENSMUSP00000025202	TRANSLATION	protein_coding	-	CCDS21278.1	1	511	0	1.5	2.9	248.7	3	-4,-5	-	-	11.844	MINOR
ENSMUSG00000058975	Kcnc1	ENSMUST00000160234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000948	Gm38393	ENSMUST00000191456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000948	Gm38393	ENSMUST00000189432	ENSMUSP00000139935	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	38	2	0	0	74	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000000948	Gm38393	ENSMUST00000191491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000948	Gm38393	ENSMUST00000179360	ENSMUSP00000136053	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	71	2	0	7.5	156.1	0	-4,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000094187	Vmn1r170	ENSMUST00000170166	ENSMUSP00000127655	TRANSLATION	protein_coding	-	CCDS52133.1	-	304	0	0	1.5	68.6	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095363	Gm4567	ENSMUST00000178591	ENSMUSP00000136041	TRANSLATION	protein_coding	-	CCDS57519.1	-	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095363	Gm4567	ENSMUST00000190554	ENSMUSP00000140310	TRANSLATION	protein_coding	-	CCDS57519.1	1	301	17	1	0.5	242.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035191	Rfpl4	ENSMUST00000208468	ENSMUSP00000146891	TRANSLATION	protein_coding	-	-	2	281	7	1	0	195	0	-4,-5	-	-	16.05	MINOR
ENSMUSG00000035191	Rfpl4	ENSMUST00000045215	ENSMUSP00000039519	TRANSLATION	protein_coding	-	CCDS20759.1	1	287	7	1.33	0.5	202.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035191	Rfpl4	ENSMUST00000179971	ENSMUSP00000136497	TRANSLATION	protein_coding	-	CCDS20759.1	1	287	7	1.33	0.5	202.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062132	Arhgap33os	ENSMUST00000124276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062132	Arhgap33os	ENSMUST00000238768	ENSMUSP00000158607	TRANSLATION	protein_coding	-	-	-	667	0	4.085	0	58.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078754	Scgb2b3	ENSMUST00000108090	ENSMUSP00000103725	TRANSLATION	protein_coding	-	CCDS57534.1	1	112	0	0.8	0.5	102.4	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000054498	Olfr308	ENSMUST00000044256	ENSMUSP00000049454	TRANSLATION	protein_coding	-	CCDS21425.1	-	308	0	0.28	7.5	179.9	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000054498	Olfr308	ENSMUST00000214977	ENSMUSP00000150391	TRANSLATION	protein_coding	-	CCDS21425.1	5	308	0	0.28	7.5	179.9	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000054498	Olfr308	ENSMUST00000215841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091441	Gm17387	ENSMUST00000170892	ENSMUSP00000129849	TRANSLATION	protein_coding	start/stop	-	5	24	0	0	0	0	0	-2,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000030823	9130019O22Rik	ENSMUST00000164345	ENSMUSP00000131610	TRANSLATION	protein_coding	-	-	1	89	0	0	0	26.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000030823	9130019O22Rik	ENSMUST00000049052	ENSMUSP00000038195	TRANSLATION	protein_coding	-	CCDS40143.1	1	543	52	0.4	0.5	355.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063229	Ldha	ENSMUST00000133062	ENSMUSP00000147640	TRANSLATION	protein_coding	stop	-	2	68	8	1.83	0	50.4	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000210631	ENSMUSP00000147825	TRANSLATION	protein_coding	-	-	5	205	18	2.75	0	58.3	2	-4,-5	-	-	0	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000132157	ENSMUSP00000148190	TRANSLATION	protein_coding	stop	-	2	176	22	5.16	0	171.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000147535	ENSMUSP00000123356	TRANSLATION	protein_coding	stop	-	3	236	26	7.24	0	171.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000210968	ENSMUSP00000147697	TRANSLATION	protein_coding	stop	-	5	104	8	2.83	0	59.4	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000125862	ENSMUSP00000147460	TRANSLATION	protein_coding	stop	-	2	66	8	1.83	0	46	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000210467	ENSMUSP00000147988	TRANSLATION	protein_coding	stop	-	3	128	15	3.66	0	121	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000210198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063229	Ldha	ENSMUST00000209548	ENSMUSP00000147293	TRANSLATION	nonsense_mediated_decay	-	-	1	201	26	5.91	0	171.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000209984	ENSMUSP00000148107	TRANSLATION	protein_coding	-	CCDS52255.1	1	361	29	9.24	5.1	256.1	2	-4,-7	-	-	18.888	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000210815	ENSMUSP00000148046	TRANSLATION	protein_coding	-	-	5	315	26	8.74	0	206.2	2	-4,-5	-	-	12.006	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000092621	ENSMUSP00000097661	TRANSLATION	protein_coding	stop	-	5	236	26	7.24	0	171.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000063229	Ldha	ENSMUST00000124696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063229	Ldha	ENSMUST00000048209	ENSMUSP00000036386	TRANSLATION	protein_coding	-	CCDS21289.1	1	332	29	9.24	19.5	256.1	2	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000063229	Ldha	ENSMUST00000005051	ENSMUSP00000103267	TRANSLATION	protein_coding	-	CCDS21289.1	1	332	29	9.24	19.5	256.1	2	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030781	Slc5a2	ENSMUST00000118169	ENSMUSP00000112597	TRANSLATION	protein_coding	-	CCDS21894.1	1	670	0	8.525	6.3	557.5	29	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030781	Slc5a2	ENSMUST00000146735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030781	Slc5a2	ENSMUST00000153418	ENSMUSP00000145699	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	1.3	0	65.2	2	-4,0	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000206909	ENSMUSP00000145739	TRANSLATION	protein_coding	stop	-	5	254	0	4.23	0	254.3	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000033045	ENSMUSP00000145789	TRANSLATION	protein_coding	stop	-	2	297	0	5.28	0	344.2	18	-4,-1	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000206703	ENSMUSP00000145615	TRANSLATION	nonsense_mediated_decay	start	-	5	154	0	1.78	0	96.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000136345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030781	Slc5a2	ENSMUST00000142841	ENSMUSP00000115451	TRANSLATION	protein_coding	stop	-	3	276	0	4.605	0	264.8	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000137038	ENSMUSP00000124318	TRANSLATION	nonsense_mediated_decay	start	-	3	115	0	1.95	0	133.8	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000171335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030781	Slc5a2	ENSMUST00000206716	ENSMUSP00000145578	TRANSLATION	protein_coding	start	-	5	382	0	4.25	0	287.7	11	-4,-6	-	-	-1	MINOR
ENSMUSG00000030781	Slc5a2	ENSMUST00000205720	ENSMUSP00000145581	TRANSLATION	nonsense_mediated_decay	-	-	5	466	0	6.375	0	394.6	19	-4,-7	-	-	-1	MINOR
ENSMUSG00000094208	Vmn1r130	ENSMUST00000177936	ENSMUSP00000136091	TRANSLATION	protein_coding	-	CCDS52099.1	-	307	0	0	1.5	55.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096071	Vmn1r143	ENSMUST00000171622	ENSMUSP00000127638	TRANSLATION	protein_coding	-	CCDS52110.1	-	307	0	0	1.5	55.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000108596	Gm49368	ENSMUST00000098015	ENSMUSP00000095625	TRANSLATION	protein_coding,RT	-	-	1	1232	24	24.52	0	343	0	4,-1	-	-	-1	PRINCIPAL:3
ENSMUSG00000108596	Gm49368	ENSMUST00000134694	ENSMUSP00000117120	TRANSLATION	protein_coding,RT	start	-	5	125	0	0.75	0	27.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000049685	Cyp2g1	ENSMUST00000205273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049685	Cyp2g1	ENSMUST00000040944	ENSMUSP00000047150	TRANSLATION	protein_coding	-	CCDS21007.1	1	494	31	8.8	5.1	495.4	0	1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000043354	Olfr577	ENSMUST00000215237	ENSMUSP00000150712	TRANSLATION	protein_coding	-	CCDS21556.1	5	312	0	0	2.7	464.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043354	Olfr577	ENSMUST00000214080	ENSMUSP00000148993	TRANSLATION	protein_coding	-	CCDS21556.1	5	312	0	0	2.7	464.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043354	Olfr577	ENSMUST00000051505	ENSMUSP00000059586	TRANSLATION	protein_coding	-	CCDS21556.1	-	312	0	0	2.7	464.7	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061702	Tmem91	ENSMUST00000079439	ENSMUSP00000078407	TRANSLATION	protein_coding	-	CCDS39840.1	1	172	0	0	1.5	68.2	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000061702	Tmem91	ENSMUST00000150306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061702	Tmem91	ENSMUST00000108404	ENSMUSP00000104041	TRANSLATION	protein_coding	-	CCDS80681.1	5	123	0	0	0.5	31.6	4	-4,-6	-	-	2.778	MINOR
ENSMUSG00000061702	Tmem91	ENSMUST00000126983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061702	Tmem91	ENSMUST00000150883	ENSMUSP00000115089	TRANSLATION	protein_coding	start	-	5	68	0	0	0	31.6	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000061702	Tmem91	ENSMUST00000108405	ENSMUSP00000104042	TRANSLATION	protein_coding	-	CCDS71918.1	3	141	0	0	0.5	35.1	4	-4,-6	-	-	3.09	MINOR
ENSMUSG00000051680	Olfr693	ENSMUST00000215541	ENSMUSP00000150203	TRANSLATION	protein_coding	-	CCDS21665.1	5	316	0	0.36	6.3	162.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051680	Olfr693	ENSMUST00000057817	ENSMUSP00000059679	TRANSLATION	protein_coding	-	CCDS21665.1	-	316	0	0.36	6.3	162.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070699	Sars2	ENSMUST00000207877	ENSMUSP00000146884	TRANSLATION	nonsense_mediated_decay	-	-	3	154	0	2.16	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000070699	Sars2	ENSMUST00000094632	ENSMUSP00000092216	TRANSLATION	protein_coding	-	CCDS21053.1	1	518	20	13.08	3.9	111.5	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000070699	Sars2	ENSMUST00000207897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015133	Lrrk1	ENSMUST00000145954	ENSMUSP00000114938	TRANSLATION	nonsense_mediated_decay	start	-	1	508	20	2.64	0	138	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015133	Lrrk1	ENSMUST00000015277	ENSMUSP00000015277	TRANSLATION	protein_coding	-	CCDS21344.1	1	2014	20	9.44	2.7	281.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015133	Lrrk1	ENSMUST00000167705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015133	Lrrk1	ENSMUST00000154893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015133	Lrrk1	ENSMUST00000130438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015133	Lrrk1	ENSMUST00000131239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015133	Lrrk1	ENSMUST00000137181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070371	Prss36	ENSMUST00000094026	ENSMUSP00000091565	TRANSLATION	protein_coding	-	-	5	863	10	5.86	0.5	334.6	0	-1,-3	-	-	17.772	ALTERNATIVE:2
ENSMUSG00000070371	Prss36	ENSMUST00000144192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070371	Prss36	ENSMUST00000152697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070371	Prss36	ENSMUST00000153110	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070371	Prss36	ENSMUST00000141385	ENSMUSP00000120544	TRANSLATION	protein_coding	stop	-	5	152	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070371	Prss36	ENSMUST00000156152	ENSMUSP00000121706	TRANSLATION	protein_coding	-	-	5	351	0	2.42	0	70.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000070371	Prss36	ENSMUST00000150591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070371	Prss36	ENSMUST00000118755	ENSMUSP00000112659	TRANSLATION	protein_coding	-	CCDS52410.2	5	852	10	5.86	0.5	338.4	0	-1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000054672	5830411N06Rik	ENSMUST00000059882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054672	5830411N06Rik	ENSMUST00000164583	ENSMUSP00000131905	TRANSLATION	protein_coding	-	CCDS52433.1	1	1112	5	3.18	0.5	597.7	0	3,-2	-	-	17	PRINCIPAL:4
ENSMUSG00000054672	5830411N06Rik	ENSMUST00000211749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054672	5830411N06Rik	ENSMUST00000093984	ENSMUSP00000091520	TRANSLATION	protein_coding	-	CCDS52434.1	1	996	5	3.18	0.5	597.7	0	3,-2	-	-	17	ALTERNATIVE:2
ENSMUSG00000054672	5830411N06Rik	ENSMUST00000210212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070802	Pnmal2	ENSMUST00000094807	ENSMUSP00000092401	TRANSLATION	protein_coding	-	CCDS52043.1	-	661	0	0	0.5	115.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025468	Caly	ENSMUST00000026541	ENSMUSP00000026541	TRANSLATION	protein_coding	-	CCDS21962.1	1	226	0	0	1.5	257.1	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025468	Caly	ENSMUST00000211681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025468	Caly	ENSMUST00000166758	ENSMUSP00000130779	TRANSLATION	protein_coding	-	CCDS21962.1	1	226	0	0	1.5	257.1	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025468	Caly	ENSMUST00000211283	ENSMUSP00000148173	TRANSLATION	protein_coding	-	CCDS21962.1	1	226	0	0	1.5	257.1	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025468	Caly	ENSMUST00000211044	ENSMUSP00000148159	TRANSLATION	protein_coding	-	CCDS21962.1	5	226	0	0	1.5	257.1	1	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025479	Cyp2e1	ENSMUST00000210403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025479	Cyp2e1	ENSMUST00000209253	ENSMUSP00000148090	TRANSLATION	protein_coding	-	-	5	434	31	7.8	0	425.7	0	-1,-5	-	-	10.266	MINOR
ENSMUSG00000025479	Cyp2e1	ENSMUST00000026552	ENSMUSP00000026552	TRANSLATION	protein_coding	-	CCDS21985.1	1	493	34	8.8	5.1	488	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025479	Cyp2e1	ENSMUST00000210235	ENSMUSP00000147845	TRANSLATION	protein_coding	-	-	1	333	23	5.8	0	206.3	0	-1,-5	-	-	0	MINOR
ENSMUSG00000108622	Gm36864	ENSMUST00000222162	ENSMUSP00000152586	TRANSLATION	nonsense_mediated_decay	-	-	5	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108622	Gm36864	ENSMUST00000205530	ENSMUSP00000152057	TRANSLATION	protein_coding	-	-	3	109	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000108622	Gm36864	ENSMUST00000223070	ENSMUSP00000152432	TRANSLATION	protein_coding	-	-	5	447	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000056978	Hamp2	ENSMUST00000217812	ENSMUSP00000151677	TRANSLATION	protein_coding	-	CCDS39894.1	1	84	0	0	1.5	65.7	0	2,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000056978	Hamp2	ENSMUST00000074671	ENSMUSP00000074240	TRANSLATION	protein_coding	-	-	1	83	0	0	1.5	65.7	0	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000056978	Hamp2	ENSMUST00000205641	ENSMUSP00000145962	TRANSLATION	protein_coding	start	-	3	103	0	0	0	65.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095619	Vmn1r157	ENSMUST00000178215	ENSMUSP00000137271	TRANSLATION	protein_coding	-	CCDS52120.1	-	297	0	0	0.5	22.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093871	Vmn1r253	ENSMUST00000172551	ENSMUSP00000133608	TRANSLATION	protein_coding	-	CCDS71907.1	-	307	0	0	1.5	61.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000062712	Olfr531	ENSMUST00000216053	ENSMUSP00000150424	TRANSLATION	protein_coding	-	CCDS21975.1	5	304	0	0.3	2.7	155.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062712	Olfr531	ENSMUST00000080153	ENSMUSP00000079048	TRANSLATION	protein_coding	-	CCDS21975.1	5	304	0	0.3	2.7	155.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062712	Olfr531	ENSMUST00000217032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062712	Olfr531	ENSMUST00000217167	ENSMUSP00000149942	TRANSLATION	protein_coding	-	CCDS21975.1	-	304	0	0.3	2.7	155.5	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094589	Vmn1r118	ENSMUST00000172322	ENSMUSP00000125956	TRANSLATION	protein_coding	-	CCDS52086.1	-	306	0	0	1.5	58.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094426	Olfr478	ENSMUST00000210173	ENSMUSP00000147713	TRANSLATION	protein_coding	-	CCDS21700.1	3	314	0	0.32	2.7	181.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094426	Olfr478	ENSMUST00000049719	ENSMUSP00000058931	TRANSLATION	protein_coding	-	CCDS21700.1	-	314	0	0.32	2.7	181.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060376	Bckdha	ENSMUST00000071329	ENSMUSP00000071292	TRANSLATION	protein_coding	-	CCDS52154.1	1	446	16	9.25	5.1	382.1	0	-2,2	-	-	20	PRINCIPAL:1
ENSMUSG00000060376	Bckdha	ENSMUST00000205808	ENSMUSP00000146018	TRANSLATION	protein_coding	start	-	5	99	5	2	0	116.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020168	Olfr299	ENSMUST00000057734	ENSMUSP00000062434	TRANSLATION	protein_coding	-	CCDS21430.1	-	330	0	0.2	1.5	155.9	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020168	Olfr299	ENSMUST00000217253	ENSMUSP00000149038	TRANSLATION	protein_coding	-	CCDS21430.1	5	330	0	0.2	1.5	155.9	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095248	Olfr681	ENSMUST00000215564	ENSMUSP00000149338	TRANSLATION	protein_coding	-	CCDS21641.1	5	315	0	0.42	8.8	242.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000095248	Olfr681	ENSMUST00000098157	ENSMUSP00000095760	TRANSLATION	protein_coding	-	CCDS21641.1	-	315	0	0.42	8.8	242.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000095248	Olfr681	ENSMUST00000215180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095248	Olfr681	ENSMUST00000216247	ENSMUSP00000150733	TRANSLATION	protein_coding	-	CCDS21641.1	5	315	0	0.42	8.8	242.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000095248	Olfr681	ENSMUST00000215517	ENSMUSP00000151022	TRANSLATION	protein_coding	-	CCDS21641.1	5	315	0	0.42	8.8	242.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000070815	Vmn1r87	ENSMUST00000211249	ENSMUSP00000148010	TRANSLATION	protein_coding	-	CCDS20828.1	3	295	0	0	0.5	120	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000070815	Vmn1r87	ENSMUST00000228800	ENSMUSP00000154184	TRANSLATION	protein_coding	-	CCDS20828.1	-	295	0	0	0.5	120	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000070815	Vmn1r87	ENSMUST00000227443	ENSMUSP00000153894	TRANSLATION	protein_coding	-	CCDS20828.1	-	295	0	0	0.5	120	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000070815	Vmn1r87	ENSMUST00000094827	ENSMUSP00000092422	TRANSLATION	protein_coding	-	CCDS20828.1	-	295	0	0	0.5	120	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000049676	Catsperg1	ENSMUST00000171102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049676	Catsperg1	ENSMUST00000163782	ENSMUSP00000127409	TRANSLATION	nonsense_mediated_decay	start	-	1	93	0	0	0	168.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049676	Catsperg1	ENSMUST00000069861	ENSMUSP00000067388	TRANSLATION	protein_coding	-	-	2	216	0	0	0	341.4	0	2,-1	-	-	0	MINOR
ENSMUSG00000049676	Catsperg1	ENSMUST00000169143	ENSMUSP00000129837	TRANSLATION	protein_coding	-	-	5	1151	0	0	0.5	1987.6	1	1,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000049676	Catsperg1	ENSMUST00000085819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000165907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000166654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000163614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000047846	ENSMUSP00000045233	TRANSLATION	protein_coding	-	CCDS52170.1	5	1098	0	0	0.5	1089.9	1	1,-1	-	-	0	MINOR
ENSMUSG00000049676	Catsperg1	ENSMUST00000167064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049676	Catsperg1	ENSMUST00000172226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000163445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000166419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049676	Catsperg1	ENSMUST00000164653	ENSMUSP00000131827	TRANSLATION	nonsense_mediated_decay	-	-	2	359	0	0	0	527.1	0	1,-1	-	-	-1	MINOR
ENSMUSG00000001773	Folh1	ENSMUST00000209082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001773	Folh1	ENSMUST00000001824	ENSMUSP00000001824	TRANSLATION	protein_coding	-	CCDS21436.1	1	752	11	16.75	1.5	220.1	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000001773	Folh1	ENSMUST00000107271	ENSMUSP00000102892	TRANSLATION	protein_coding	-	CCDS52300.1	1	719	11	15.75	0.5	220.1	1	-4,-7	-	-	16.002	MINOR
ENSMUSG00000050973	Gdpgp1	ENSMUST00000062915	ENSMUSP00000061808	TRANSLATION	protein_coding	-	CCDS39995.1	1	386	12	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033967	Rnf225	ENSMUST00000045870	ENSMUSP00000042816	TRANSLATION	protein_coding	-	CCDS20818.1	1	332	8	0	1.5	36.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000038520	Tbc1d17	ENSMUST00000133846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038520	Tbc1d17	ENSMUST00000208890	ENSMUSP00000146691	TRANSLATION	protein_coding	start	-	5	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038520	Tbc1d17	ENSMUST00000047085	ENSMUSP00000048260	TRANSLATION	protein_coding	-	CCDS39944.1	1	645	0	10.05	1.5	539.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038520	Tbc1d17	ENSMUST00000142098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038520	Tbc1d17	ENSMUST00000130081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038520	Tbc1d17	ENSMUST00000153161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038520	Tbc1d17	ENSMUST00000145959	ENSMUSP00000121546	TRANSLATION	nonsense_mediated_decay	-	-	1	546	0	8.082	0	524.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038520	Tbc1d17	ENSMUST00000207532	ENSMUSP00000146935	TRANSLATION	protein_coding	stop	-	5	75	0	0	0	104.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038520	Tbc1d17	ENSMUST00000208714	ENSMUSP00000147046	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038520	Tbc1d17	ENSMUST00000149921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038520	Tbc1d17	ENSMUST00000207293	ENSMUSP00000146488	TRANSLATION	protein_coding	-	-	3	215	0	0	0	298.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000038520	Tbc1d17	ENSMUST00000139947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047473	Zfp30	ENSMUST00000126504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047473	Zfp30	ENSMUST00000032803	ENSMUSP00000032803	TRANSLATION	protein_coding	-	CCDS21075.1	1	548	51	0.6	1.5	304.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047473	Zfp30	ENSMUST00000122387	ENSMUSP00000113426	TRANSLATION	protein_coding	-	-	1	467	51	0.6	0.5	230.7	0	-4,-7	-	-	13.578	MINOR
ENSMUSG00000001247	Lsr	ENSMUST00000108116	ENSMUSP00000103751	TRANSLATION	protein_coding	-	CCDS52186.1	1	575	0	0	0.5	83.2	2	0,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000001247	Lsr	ENSMUST00000098553	ENSMUSP00000096153	TRANSLATION	protein_coding	-	CCDS52185.1	1	526	0	0	0.5	0	0	0,-4	-	-	0	MINOR
ENSMUSG00000001247	Lsr	ENSMUST00000001279	ENSMUSP00000001279	TRANSLATION	protein_coding	-	CCDS21119.1	1	594	0	0	0.5	83.2	2	0,-4	-	-	6	PRINCIPAL:3
ENSMUSG00000001247	Lsr	ENSMUST00000147431	ENSMUSP00000123487	TRANSLATION	protein_coding	stop	-	5	277	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001247	Lsr	ENSMUST00000205961	ENSMUSP00000146120	TRANSLATION	protein_coding	-	CCDS21119.1	1	594	0	0	0.5	83.2	2	0,-4	-	-	6	PRINCIPAL:3
ENSMUSG00000041187	Prkd2	ENSMUST00000206510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041187	Prkd2	ENSMUST00000205386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041187	Prkd2	ENSMUST00000205841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041187	Prkd2	ENSMUST00000205456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041187	Prkd2	ENSMUST00000168093	ENSMUSP00000131192	TRANSLATION	protein_coding	-	CCDS20855.1	1	875	17	8.2	1.5	335.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041187	Prkd2	ENSMUST00000086104	ENSMUSP00000083273	TRANSLATION	protein_coding	-	CCDS20855.1	1	875	17	8.2	1.5	335.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041187	Prkd2	ENSMUST00000205798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041187	Prkd2	ENSMUST00000205999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107068	Gm42742	ENSMUST00000032918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107068	Gm42742	ENSMUST00000202798	ENSMUSP00000144243	TRANSLATION	protein_coding	-	CCDS21854.1	1	253	0	0	5.3	169.9	0	-2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000107068	Gm42742	ENSMUST00000161728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107068	Gm42742	ENSMUST00000201606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107068	Gm42742	ENSMUST00000202624	ENSMUSP00000144099	TRANSLATION	protein_coding,RT	stop	-	3	176	0	0	0	101	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000056883	Olfr533	ENSMUST00000217179	ENSMUSP00000150653	TRANSLATION	protein_coding	-	CCDS21977.1	5	320	0	0.36	0.5	165.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056883	Olfr533	ENSMUST00000071755	ENSMUSP00000071667	TRANSLATION	protein_coding	-	CCDS21977.1	-	320	0	0.36	0.5	165.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056883	Olfr533	ENSMUST00000211093	ENSMUSP00000148260	TRANSLATION	protein_coding	-	CCDS21977.1	3	320	0	0.36	0.5	165.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056883	Olfr533	ENSMUST00000215308	ENSMUSP00000150552	TRANSLATION	protein_coding	-	CCDS21977.1	5	320	0	0.36	0.5	165.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056883	Olfr533	ENSMUST00000216292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056883	Olfr533	ENSMUST00000216258	ENSMUSP00000149238	TRANSLATION	protein_coding	-	CCDS21977.1	5	320	0	0.36	0.5	165.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003190	Bcl2l12	ENSMUST00000207342	ENSMUSP00000146355	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003190	Bcl2l12	ENSMUST00000207443	ENSMUSP00000146945	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003190	Bcl2l12	ENSMUST00000208128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003190	Bcl2l12	ENSMUST00000207755	ENSMUSP00000146542	TRANSLATION	protein_coding	-	-	2	115	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000003190	Bcl2l12	ENSMUST00000003290	ENSMUSP00000003290	TRANSLATION	protein_coding	-	CCDS21223.1	1	255	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000003190	Bcl2l12	ENSMUST00000207213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032776	Mctp2	ENSMUST00000206755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032776	Mctp2	ENSMUST00000079323	ENSMUSP00000078302	TRANSLATION	protein_coding	-	CCDS21361.1	1	878	4	7.38	1.7	194.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000032776	Mctp2	ENSMUST00000206976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032776	Mctp2	ENSMUST00000205410	ENSMUSP00000145571	TRANSLATION	nonsense_mediated_decay	start	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032776	Mctp2	ENSMUST00000206466	ENSMUSP00000145868	TRANSLATION	protein_coding	start	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030670	Cyp2r1	ENSMUST00000119712	ENSMUSP00000112818	TRANSLATION	protein_coding	-	-	5	290	20	5.34	1.2	248.4	2	0,-4	-	-	1.998	MINOR
ENSMUSG00000030670	Cyp2r1	ENSMUST00000138712	ENSMUSP00000123556	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	0.666	0	0	2	0,-4	-	-	-1	MINOR
ENSMUSG00000030670	Cyp2r1	ENSMUST00000133484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030670	Cyp2r1	ENSMUST00000128587	ENSMUSP00000121924	TRANSLATION	nonsense_mediated_decay	start	-	5	268	12	3.924	0	153.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030670	Cyp2r1	ENSMUST00000147428	ENSMUSP00000119605	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	0.666	0	0	2	0,-4	-	-	-1	MINOR
ENSMUSG00000030670	Cyp2r1	ENSMUST00000032908	ENSMUSP00000032908	TRANSLATION	protein_coding	-	CCDS21761.1	1	501	30	7.34	1.7	403.2	2	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000030670	Cyp2r1	ENSMUST00000211506	ENSMUSP00000147544	TRANSLATION	protein_coding	-	-	5	292	24	4.08	0	281.6	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000031493	Ggn	ENSMUST00000033886	ENSMUSP00000033886	TRANSLATION	protein_coding	-	CCDS21067.1	1	137	3	0	0.5	228.6	0	-4,-6	-	-	3	MINOR
ENSMUSG00000031493	Ggn	ENSMUST00000208330	ENSMUSP00000146620	TRANSLATION	protein_coding	-	-	5	686	3	0	0.5	541	0	-4,-5	-	-	9	ALTERNATIVE:2
ENSMUSG00000031493	Ggn	ENSMUST00000208288	ENSMUSP00000146665	TRANSLATION	nonsense_mediated_decay	-	-	1	305	0	0	0	344	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031493	Ggn	ENSMUST00000098609	ENSMUSP00000096209	TRANSLATION	protein_coding	-	CCDS52168.1	1	709	3	0	0.5	541	0	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000031493	Ggn	ENSMUST00000209019	ENSMUSP00000146750	TRANSLATION	protein_coding	-	-	1	673	3	0	0.5	541	0	-4,-6	-	-	9	ALTERNATIVE:2
ENSMUSG00000073931	Olfr646	ENSMUST00000098182	ENSMUSP00000095784	TRANSLATION	protein_coding	-	CCDS21608.1	-	312	0	0.42	0.5	363.8	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073931	Olfr646	ENSMUST00000214099	ENSMUSP00000149102	TRANSLATION	protein_coding	-	CCDS21608.1	5	312	0	0.42	0.5	363.8	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073931	Olfr646	ENSMUST00000214291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046056	Sbsn	ENSMUST00000182721	ENSMUSP00000138654	TRANSLATION	protein_coding	-	-	3	176	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000046056	Sbsn	ENSMUST00000182229	ENSMUSP00000138561	TRANSLATION	protein_coding	-	CCDS59725.1	1	164	0	0	1.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000046056	Sbsn	ENSMUST00000182577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046056	Sbsn	ENSMUST00000182227	ENSMUSP00000138427	TRANSLATION	protein_coding	-	-	5	92	0	0	1	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000046056	Sbsn	ENSMUST00000080518	ENSMUSP00000079362	TRANSLATION	protein_coding	-	CCDS39891.1	1	682	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000030706	Mrpl48	ENSMUST00000152876	ENSMUSP00000117055	TRANSLATION	protein_coding	stop	-	3	113	0	1.93	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000150042	ENSMUSP00000116090	TRANSLATION	protein_coding	-	CCDS21502.2	1	211	0	6.59	5.1	59.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030706	Mrpl48	ENSMUST00000127253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030706	Mrpl48	ENSMUST00000132888	ENSMUSP00000146661	TRANSLATION	protein_coding	stop	-	5	59	0	1.91	0	26.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000107053	ENSMUSP00000146654	TRANSLATION	nonsense_mediated_decay	start	-	3	42	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000064334	ENSMUSP00000067290	TRANSLATION	protein_coding	-	-	-	102	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000138448	ENSMUSP00000146663	TRANSLATION	protein_coding	stop	-	3	51	0	1.58	0	22.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000208916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030706	Mrpl48	ENSMUST00000146003	ENSMUSP00000146539	TRANSLATION	protein_coding	-	-	1	113	0	3.66	0.5	50.4	0	-4,-7	-	-	5.202	MINOR
ENSMUSG00000030706	Mrpl48	ENSMUST00000137777	ENSMUSP00000146371	TRANSLATION	protein_coding	stop	-	3	74	0	2.41	0	35.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046396	Olfr609	ENSMUST00000216075	ENSMUSP00000149003	TRANSLATION	protein_coding	-	CCDS21576.1	5	319	0	0.42	1.5	395.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046396	Olfr609	ENSMUST00000216360	ENSMUSP00000149804	TRANSLATION	protein_coding	-	CCDS21576.1	5	319	0	0.42	1.5	395.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046396	Olfr609	ENSMUST00000055787	ENSMUSP00000051749	TRANSLATION	protein_coding	-	CCDS21576.1	-	319	0	0.42	1.5	395.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099900	Scgb2b21	ENSMUST00000185407	ENSMUSP00000140117	TRANSLATION	protein_coding	-	CCDS80702.1	5	112	0	1.67	0.5	93.1	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046378	Asphd1	ENSMUST00000106339	ENSMUSP00000101946	TRANSLATION	protein_coding	-	CCDS40134.1	1	109	0	2.36	1.5	113.3	0	-4,-1	-	-	10.608	MINOR
ENSMUSG00000046378	Asphd1	ENSMUST00000106340	ENSMUSP00000101947	TRANSLATION	protein_coding	-	CCDS85417.1	1	360	0	2.36	1.5	136.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046378	Asphd1	ENSMUST00000052937	ENSMUSP00000049848	TRANSLATION	protein_coding	-	CCDS40134.1	1	109	0	2.36	1.5	113.3	0	-4,-1	-	-	10.608	MINOR
ENSMUSG00000073945	Olfr618	ENSMUST00000214883	ENSMUSP00000151147	TRANSLATION	protein_coding	-	CCDS21580.1	5	318	0	0.36	4	363.1	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000073945	Olfr618	ENSMUST00000098197	ENSMUSP00000095799	TRANSLATION	protein_coding	-	CCDS21580.1	-	318	0	0.36	4	363.1	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000062426	Olfr304	ENSMUST00000077210	ENSMUSP00000076449	TRANSLATION	protein_coding	-	CCDS21428.1	-	333	0	0.2	1.5	128.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035686	Thrsp	ENSMUST00000206613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035686	Thrsp	ENSMUST00000043077	ENSMUSP00000042988	TRANSLATION	protein_coding	-	CCDS21458.1	1	150	0	1	3.9	178.4	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000066850	Vmn1r65	ENSMUST00000086338	ENSMUSP00000083520	TRANSLATION	protein_coding	-	CCDS20767.1	1	332	0	0	0.5	49.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066850	Vmn1r65	ENSMUST00000227656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054808	Actn4	ENSMUST00000140622	ENSMUSP00000123210	TRANSLATION	protein_coding	stop	-	5	206	0	5.58	0	140.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054808	Actn4	ENSMUST00000068045	ENSMUSP00000066068	TRANSLATION	protein_coding	-	CCDS21061.1	1	912	3	20.58	8.8	531.6	0	-4,-5	-	-	15.126	MINOR
ENSMUSG00000054808	Actn4	ENSMUST00000144909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054808	Actn4	ENSMUST00000217157	ENSMUSP00000151028	TRANSLATION	protein_coding	-	-	5	932	3	21.33	8.8	554.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054808	Actn4	ENSMUST00000216863	ENSMUSP00000151188	TRANSLATION	protein_coding	start	-	5	323	0	6.75	0	197.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054808	Actn4	ENSMUST00000143584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054808	Actn4	ENSMUST00000148196	ENSMUSP00000122268	TRANSLATION	protein_coding	stop	-	5	133	0	3.58	0	93.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054808	Actn4	ENSMUST00000207765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054808	Actn4	ENSMUST00000127210	ENSMUSP00000115436	TRANSLATION	protein_coding	stop	-	5	518	0	12.08	0	319.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054808	Actn4	ENSMUST00000150493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054808	Actn4	ENSMUST00000129338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047544	Olfr616	ENSMUST00000214806	ENSMUSP00000150171	TRANSLATION	protein_coding	-	CCDS40058.1	5	317	0	0.2	2.7	387.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047544	Olfr616	ENSMUST00000106886	ENSMUSP00000102499	TRANSLATION	protein_coding	-	CCDS40058.1	-	317	0	0.2	2.7	387.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047544	Olfr616	ENSMUST00000217293	ENSMUSP00000150954	TRANSLATION	protein_coding	-	CCDS40058.1	5	317	0	0.2	2.7	387.6	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066756	Igfl3	ENSMUST00000152973	ENSMUSP00000123628	TRANSLATION	protein_coding	-	CCDS52049.1	1	140	0	0	0.5	120.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000050428	Fbxo46	ENSMUST00000053109	ENSMUSP00000055692	TRANSLATION	protein_coding	-	CCDS20890.1	1	603	4	0	0.5	26	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000050428	Fbxo46	ENSMUST00000165913	ENSMUSP00000129427	TRANSLATION	protein_coding	-	CCDS20890.1	1	603	4	0	0.5	26	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000030790	Adm	ENSMUST00000033054	ENSMUSP00000033054	TRANSLATION	protein_coding	-	CCDS21745.1	1	184	0	1	1.5	99.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030790	Adm	ENSMUST00000185766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118454	Wdr88	ENSMUST00000238407	ENSMUSP00000158765	TRANSLATION	protein_coding	-	-	-	565	0	6.03	0	145.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030898	Cckbr	ENSMUST00000181339	ENSMUSP00000138052	TRANSLATION	protein_coding	-	-	1	314	0	2.84	0	146.3	5	-4,-1	-	-	8.73	MINOR
ENSMUSG00000030898	Cckbr	ENSMUST00000033189	ENSMUSP00000033189	TRANSLATION	protein_coding	-	CCDS21651.1	1	453	0	3	2.7	195.5	7	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047751	Utf1	ENSMUST00000168457	ENSMUSP00000128848	TRANSLATION	protein_coding	-	CCDS21958.1	1	339	0	0	1.5	28.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000030945	Acsm2	ENSMUST00000123638	ENSMUSP00000118276	TRANSLATION	protein_coding	start	-	3	163	21	4.69	0	101.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030945	Acsm2	ENSMUST00000129658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030945	Acsm2	ENSMUST00000129766	ENSMUSP00000118174	TRANSLATION	protein_coding	start	-	5	216	30	6.32	0	129.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030945	Acsm2	ENSMUST00000130583	ENSMUSP00000115048	TRANSLATION	protein_coding	stop	-	3	149	1	2.3	0	47.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030945	Acsm2	ENSMUST00000098084	ENSMUSP00000095690	TRANSLATION	protein_coding	-	CCDS52379.1	1	600	33	13.37	0.5	312.5	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000030945	Acsm2	ENSMUST00000208019	ENSMUSP00000146746	TRANSLATION	nonsense_mediated_decay	start	-	5	83	2	2.74	0	47.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030945	Acsm2	ENSMUST00000209069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030945	Acsm2	ENSMUST00000167935	ENSMUSP00000126670	TRANSLATION	protein_coding	-	CCDS21782.1	1	575	33	13.37	3.9	312.5	1	-4,-7	-	-	19	PRINCIPAL:3
ENSMUSG00000030945	Acsm2	ENSMUST00000207977	ENSMUSP00000146400	TRANSLATION	protein_coding	start	-	3	86	15	2.5	0	42.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030945	Acsm2	ENSMUST00000084647	ENSMUSP00000081697	TRANSLATION	protein_coding	-	CCDS52380.1	1	580	30	13.37	0.5	312.5	1	-4,-7	-	-	16.002	MINOR
ENSMUSG00000094445	1700015G11Rik	ENSMUST00000185758	ENSMUSP00000140226	TRANSLATION	protein_coding	-	-	3	71	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000094445	1700015G11Rik	ENSMUST00000185841	ENSMUSP00000141159	TRANSLATION	protein_coding	-	-	5	54	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000094445	1700015G11Rik	ENSMUST00000190307	ENSMUSP00000141120	TRANSLATION	protein_coding	-	-	3	32	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000094445	1700015G11Rik	ENSMUST00000180038	ENSMUSP00000136157	TRANSLATION	protein_coding	-	CCDS57552.1	1	67	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000094493	Olfr700	ENSMUST00000079936	ENSMUSP00000078855	TRANSLATION	protein_coding	-	CCDS21671.1	-	316	0	0.36	6.3	156.7	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094493	Olfr700	ENSMUST00000214840	ENSMUSP00000150320	TRANSLATION	protein_coding	-	CCDS21671.1	5	316	0	0.36	6.3	156.7	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044876	Zfp444	ENSMUST00000149540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044876	Zfp444	ENSMUST00000108566	ENSMUSP00000104206	TRANSLATION	protein_coding	-	CCDS20770.1	1	331	16	2.616	1.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044876	Zfp444	ENSMUST00000134933	ENSMUSP00000120003	TRANSLATION	protein_coding	stop	-	5	112	0	1.816	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044876	Zfp444	ENSMUST00000108567	ENSMUSP00000104207	TRANSLATION	protein_coding	-	CCDS20770.1	1	331	16	2.616	1.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044876	Zfp444	ENSMUST00000207329	ENSMUSP00000146759	TRANSLATION	protein_coding	stop	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044876	Zfp444	ENSMUST00000108565	ENSMUSP00000104205	TRANSLATION	protein_coding	-	-	3	159	0	1.75	0	116.6	0	-4,-5	-	-	7.32	MINOR
ENSMUSG00000044876	Zfp444	ENSMUST00000054680	ENSMUSP00000050797	TRANSLATION	protein_coding	-	CCDS20770.1	1	331	16	2.616	1.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044876	Zfp444	ENSMUST00000137450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044876	Zfp444	ENSMUST00000207176	ENSMUSP00000146697	TRANSLATION	protein_coding	stop	-	3	104	0	1.75	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044876	Zfp444	ENSMUST00000128495	ENSMUSP00000121413	TRANSLATION	protein_coding	stop	-	2	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044876	Zfp444	ENSMUST00000208192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044876	Zfp444	ENSMUST00000136777	ENSMUSP00000121948	TRANSLATION	protein_coding	stop	-	3	137	0	1.816	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058145	Adamts17	ENSMUST00000138009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058145	Adamts17	ENSMUST00000107478	ENSMUSP00000103102	TRANSLATION	protein_coding	-	-	5	1095	16	7.95	0	292.4	0	2,-3	-	-	14.844	MINOR
ENSMUSG00000058145	Adamts17	ENSMUST00000148538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058145	Adamts17	ENSMUST00000098382	ENSMUSP00000095984	TRANSLATION	protein_coding	-	CCDS21349.2	5	1122	16	8.1	1.5	340	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000058145	Adamts17	ENSMUST00000156396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058145	Adamts17	ENSMUST00000154103	ENSMUSP00000121836	TRANSLATION	protein_coding	start/stop	-	3	234	0	1.91	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058145	Adamts17	ENSMUST00000125014	ENSMUSP00000147080	TRANSLATION	protein_coding	start	-	3	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058145	Adamts17	ENSMUST00000147880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096152	Vmn1r240	ENSMUST00000079099	ENSMUSP00000078103	TRANSLATION	protein_coding	-	CCDS52067.1	-	307	0	0	1.5	56.2	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000057067	Olfr297	ENSMUST00000071112	ENSMUSP00000132942	TRANSLATION	protein_coding	-	CCDS52299.1	-	310	0	0.2	0.5	153.9	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057067	Olfr297	ENSMUST00000172965	ENSMUSP00000134371	TRANSLATION	protein_coding	-	CCDS52299.1	5	310	0	0.2	0.5	153.9	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057454	Lypd3	ENSMUST00000080718	ENSMUSP00000079543	TRANSLATION	protein_coding	-	CCDS20958.1	1	363	0	1.26	0.5	75.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034867	Ankrd27	ENSMUST00000040844	ENSMUSP00000041751	TRANSLATION	protein_coding	-	CCDS21154.1	1	1048	0	14.04	0.5	236.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034867	Ankrd27	ENSMUST00000190503	ENSMUSP00000140259	TRANSLATION	protein_coding	-	-	1	993	0	12.54	0	236.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000206472	ENSMUSP00000146118	TRANSLATION	nonsense_mediated_decay	-	-	5	388	0	2.7	0	82.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000206632	ENSMUSP00000145817	TRANSLATION	nonsense_mediated_decay	start	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000188906	ENSMUSP00000139753	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000187567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034867	Ankrd27	ENSMUST00000187807	ENSMUSP00000140848	TRANSLATION	protein_coding	start/stop	-	5	231	0	5.49	0	96.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000186245	ENSMUSP00000140554	TRANSLATION	protein_coding	-	CCDS80706.1	1	377	0	2.7	0.5	82.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034867	Ankrd27	ENSMUST00000205801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034867	Ankrd27	ENSMUST00000206157	ENSMUSP00000145969	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058761	Rnf169	ENSMUST00000174264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058761	Rnf169	ENSMUST00000080817	ENSMUSP00000079631	TRANSLATION	protein_coding	-	CCDS52322.1	5	694	6	0.4	1.5	0	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000100916	Lhb	ENSMUST00000072453	ENSMUSP00000072276	TRANSLATION	protein_coding	-	CCDS21242.1	2	141	0	2	5.1	109.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000003505	Psg18	ENSMUST00000003597	ENSMUSP00000003597	TRANSLATION	protein_coding	-	CCDS20869.1	1	476	0	4	0.5	157.7	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003505	Psg18	ENSMUST00000098783	ENSMUSP00000096380	TRANSLATION	protein_coding	-	CCDS52050.1	1	263	0	3	0.5	87.5	0	-4,-7	-	-	5.79	MINOR
ENSMUSG00000003505	Psg18	ENSMUST00000183222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003505	Psg18	ENSMUST00000182983	ENSMUSP00000138759	TRANSLATION	protein_coding	start	-	3	136	0	2	0	43.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030492	Slc7a9	ENSMUST00000032703	ENSMUSP00000032703	TRANSLATION	protein_coding	-	CCDS21150.1	1	487	0	3.666	7.6	78.3	8	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030492	Slc7a9	ENSMUST00000141245	ENSMUSP00000117352	TRANSLATION	nonsense_mediated_decay	start	-	5	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030492	Slc7a9	ENSMUST00000147026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030492	Slc7a9	ENSMUST00000118969	ENSMUSP00000112726	TRANSLATION	protein_coding	-	CCDS21150.1	1	487	0	3.666	7.6	78.3	8	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000030492	Slc7a9	ENSMUST00000141905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030492	Slc7a9	ENSMUST00000118383	ENSMUSP00000113181	TRANSLATION	protein_coding	-	CCDS21150.1	5	487	0	3.666	7.6	78.3	8	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000055541	Lair1	ENSMUST00000086401	ENSMUSP00000083589	TRANSLATION	protein_coding	-	CCDS51969.1	1	263	0	1.5	0.5	0	1	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000055541	Lair1	ENSMUST00000131126	ENSMUSP00000121738	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0.3	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000055541	Lair1	ENSMUST00000205296	ENSMUSP00000145940	TRANSLATION	protein_coding	-	CCDS85202.1	1	114	0	0.3	0.5	0	0	3,-2	-	-	1.2	MINOR
ENSMUSG00000055541	Lair1	ENSMUST00000108600	ENSMUSP00000104241	TRANSLATION	protein_coding	-	CCDS80654.1	1	224	0	1.3	0.5	0	0	3,-2	-	-	5.202	ALTERNATIVE:2
ENSMUSG00000055541	Lair1	ENSMUST00000119711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055541	Lair1	ENSMUST00000136616	ENSMUSP00000122037	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0.3	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000055541	Lair1	ENSMUST00000149395	ENSMUSP00000116800	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0.3	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000055541	Lair1	ENSMUST00000068865	ENSMUSP00000070712	TRANSLATION	protein_coding	-	CCDS20729.1	1	153	0	0.5	1.5	0	1	0,-5	-	-	1.998	MINOR
ENSMUSG00000055541	Lair1	ENSMUST00000086400	ENSMUSP00000083588	TRANSLATION	protein_coding	-	-	5	246	0	1.5	0	0	1	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000055541	Lair1	ENSMUST00000206445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030447	Cyfip1	ENSMUST00000173384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000174660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000168271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000173497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000205656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000085255	ENSMUSP00000082353	TRANSLATION	protein_coding	-	CCDS52262.1	1	1251	0	28.85	7	1305.5	0	-4,-5	-	-	9.894	MINOR
ENSMUSG00000030447	Cyfip1	ENSMUST00000174793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000206862	ENSMUSP00000146194	TRANSLATION	protein_coding	stop	-	5	969	0	23	0	1015.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030447	Cyfip1	ENSMUST00000163845	ENSMUSP00000127717	TRANSLATION	protein_coding	-	CCDS21315.1	1	1253	0	29.25	19.5	1348.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030447	Cyfip1	ENSMUST00000032629	ENSMUSP00000032629	TRANSLATION	protein_coding	-	CCDS21315.1	1	1253	0	29.25	19.5	1348.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000030447	Cyfip1	ENSMUST00000173267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030447	Cyfip1	ENSMUST00000173783	ENSMUSP00000134509	TRANSLATION	protein_coding	stop	-	3	229	0	5.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040046	Tph1	ENSMUST00000107669	ENSMUSP00000103296	TRANSLATION	protein_coding	-	CCDS21280.1	1	447	15	9.75	7.5	602.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040046	Tph1	ENSMUST00000163468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040046	Tph1	ENSMUST00000170045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040046	Tph1	ENSMUST00000170251	ENSMUSP00000132489	TRANSLATION	nonsense_mediated_decay	-	-	5	287	8	5.75	0	329	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040046	Tph1	ENSMUST00000049298	ENSMUSP00000037752	TRANSLATION	protein_coding	-	CCDS21280.1	1	447	15	9.75	7.5	602.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040046	Tph1	ENSMUST00000110264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040046	Tph1	ENSMUST00000172386	ENSMUSP00000128727	TRANSLATION	nonsense_mediated_decay	start	-	5	205	0	3.95	0	102.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040046	Tph1	ENSMUST00000168335	ENSMUSP00000128107	TRANSLATION	protein_coding	-	CCDS71970.1	1	155	0	3.12	0.5	61.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000110091	Gm39115	ENSMUST00000211350	ENSMUSP00000147940	TRANSLATION	protein_coding	-	CCDS85463.1	-	232	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031078	Cttn	ENSMUST00000157079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031078	Cttn	ENSMUST00000150607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031078	Cttn	ENSMUST00000126018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031078	Cttn	ENSMUST00000148778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031078	Cttn	ENSMUST00000134131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031078	Cttn	ENSMUST00000103079	ENSMUSP00000099368	TRANSLATION	protein_coding	-	CCDS22049.1	1	546	0	1.75	2.7	518.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031078	Cttn	ENSMUST00000033407	ENSMUSP00000033407	TRANSLATION	protein_coding	-	CCDS57599.1	1	509	0	1.75	2.7	452.6	0	-4,-5	-	-	8.046	MINOR
ENSMUSG00000046096	Mosmo	ENSMUST00000208454	ENSMUSP00000146331	TRANSLATION	protein_coding	-	-	2	108	0	0	0	0	2	-3,-4	-	-	0	MINOR
ENSMUSG00000046096	Mosmo	ENSMUST00000207646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046096	Mosmo	ENSMUST00000208873	ENSMUSP00000146833	TRANSLATION	protein_coding	start	-	1	89	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000046096	Mosmo	ENSMUST00000207065	ENSMUSP00000147078	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000046096	Mosmo	ENSMUST00000208627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046096	Mosmo	ENSMUST00000060175	ENSMUSP00000055934	TRANSLATION	protein_coding	-	CCDS52381.1	1	167	0	0	17.5	0	4	-3,-4	-	-	4	PRINCIPAL:1
ENSMUSG00000046096	Mosmo	ENSMUST00000208534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046096	Mosmo	ENSMUST00000208319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057143	Trim12c	ENSMUST00000130139	ENSMUSP00000116775	TRANSLATION	protein_coding	-	CCDS52344.1	1	497	16	4.66	0.5	117.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000057143	Trim12c	ENSMUST00000059037	ENSMUSP00000060100	TRANSLATION	protein_coding	-	CCDS52344.1	1	497	16	4.66	0.5	117.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000050870	Mrgprb8	ENSMUST00000056676	ENSMUSP00000052230	TRANSLATION	protein_coding	-	CCDS21302.1	-	330	0	0.14	0.5	23.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000205721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000206757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000205587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000205433	ENSMUSP00000146223	TRANSLATION	protein_coding	stop	-	2	71	0	1	0	87.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000163475	ENSMUSP00000127760	TRANSLATION	protein_coding	-	-	1	834	60	1.4	0	412	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091474	2610021A01Rik	ENSMUST00000206985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062444	Ap3b2	ENSMUST00000147624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062444	Ap3b2	ENSMUST00000238692	ENSMUSP00000158645	TRANSLATION	protein_coding	stop	-	-	199	0	3.15	0	151	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062444	Ap3b2	ENSMUST00000152355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062444	Ap3b2	ENSMUST00000238711	ENSMUSP00000158678	TRANSLATION	protein_coding	-	-	-	1050	0	7.835	0	643.4	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000062444	Ap3b2	ENSMUST00000119121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062444	Ap3b2	ENSMUST00000082090	ENSMUSP00000080739	TRANSLATION	protein_coding	-	CCDS21403.1	1	1082	0	8.835	2.7	759.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000062444	Ap3b2	ENSMUST00000125634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062444	Ap3b2	ENSMUST00000238438	ENSMUSP00000158658	TRANSLATION	protein_coding	-	-	-	1101	0	8.835	0.5	759.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000062444	Ap3b2	ENSMUST00000208911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090411	Vmn1r174	ENSMUST00000167551	ENSMUSP00000126478	TRANSLATION	protein_coding	-	CCDS20933.1	-	313	0	0	0.5	62.8	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090411	Vmn1r174	ENSMUST00000228331	ENSMUSP00000154506	TRANSLATION	protein_coding	-	CCDS20933.1	-	313	0	0	0.5	62.8	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054568	Usp17la	ENSMUST00000067695	ENSMUSP00000068997	TRANSLATION	protein_coding	-	CCDS21629.1	1	526	12	0.42	0.5	173.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033429	Mcee	ENSMUST00000206138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033429	Mcee	ENSMUST00000206882	ENSMUSP00000145591	TRANSLATION	protein_coding	-	-	2	32	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000033429	Mcee	ENSMUST00000206194	ENSMUSP00000146220	TRANSLATION	protein_coding	-	-	2	124	2	2.3	0.5	28.3	0	-2,2	-	-	9.729	MINOR
ENSMUSG00000033429	Mcee	ENSMUST00000037205	ENSMUSP00000047855	TRANSLATION	protein_coding	-	CCDS21334.1	1	178	3	3.3	1.5	45.6	0	-2,2	-	-	15	PRINCIPAL:1
ENSMUSG00000035228	Ccdc106	ENSMUST00000207215	ENSMUSP00000147063	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035228	Ccdc106	ENSMUST00000207974	ENSMUSP00000146775	TRANSLATION	protein_coding	-	-	2	202	0	0	0	123.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035228	Ccdc106	ENSMUST00000108571	ENSMUSP00000104211	TRANSLATION	protein_coding	-	CCDS80660.1	1	341	0	0	1.5	325.7	0	-4,-7	-	-	6.178	MINOR
ENSMUSG00000035228	Ccdc106	ENSMUST00000208161	ENSMUSP00000146642	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035228	Ccdc106	ENSMUST00000045543	ENSMUSP00000041033	TRANSLATION	protein_coding	-	CCDS20757.1	1	279	0	0	6.6	325.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000035228	Ccdc106	ENSMUST00000208728	ENSMUSP00000146978	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035228	Ccdc106	ENSMUST00000208042	ENSMUSP00000146998	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	77.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067173	Mrgpra4	ENSMUST00000087092	ENSMUSP00000084327	TRANSLATION	protein_coding	-	CCDS21298.1	-	313	0	0.42	0.5	37.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002068	Ccne1	ENSMUST00000128785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002068	Ccne1	ENSMUST00000108023	ENSMUSP00000103658	TRANSLATION	protein_coding	-	CCDS39914.1	1	408	0	7.3	1.5	204.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002068	Ccne1	ENSMUST00000124979	ENSMUSP00000145532	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002068	Ccne1	ENSMUST00000130329	ENSMUSP00000117662	TRANSLATION	protein_coding	stop	-	3	166	0	1.9	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002068	Ccne1	ENSMUST00000137097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078787	Cyp2t4	ENSMUST00000108385	ENSMUSP00000104022	TRANSLATION	protein_coding	-	-	5	495	33	8.6	0.5	428.6	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000078787	Cyp2t4	ENSMUST00000164093	ENSMUSP00000126779	TRANSLATION	protein_coding	-	CCDS52157.1	5	503	33	8.6	0.5	428.6	0	-1,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000042909	Olfr648	ENSMUST00000216612	ENSMUSP00000149047	TRANSLATION	protein_coding	-	CCDS21613.1	2	316	0	0.42	6.4	370.4	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000042909	Olfr648	ENSMUST00000052659	ENSMUSP00000062529	TRANSLATION	protein_coding	-	CCDS21613.1	-	316	0	0.42	6.4	370.4	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000061489	Olfr525	ENSMUST00000078103	ENSMUSP00000077243	TRANSLATION	protein_coding	-	CCDS21971.1	-	309	0	0.2	1.5	180.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061489	Olfr525	ENSMUST00000214594	ENSMUSP00000149361	TRANSLATION	protein_coding	-	CCDS21971.1	5	309	0	0.2	1.5	180.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061489	Olfr525	ENSMUST00000215542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089989	Gm45713	ENSMUST00000209467	ENSMUSP00000147813	TRANSLATION	protein_coding,RT	-	-	1	446	0	6.55	0	235.7	0	0,2	-	-	-1	PRINCIPAL:1
ENSMUSG00000008373	Prpf31	ENSMUST00000108636	ENSMUSP00000104276	TRANSLATION	protein_coding	-	CCDS51965.1	5	493	0	12	0.5	419.3	0	-4,-5	-	-	10.566	MINOR
ENSMUSG00000008373	Prpf31	ENSMUST00000134047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008373	Prpf31	ENSMUST00000008517	ENSMUSP00000008517	TRANSLATION	protein_coding	-	CCDS39729.1	1	499	0	12.33	7.5	432.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000008373	Prpf31	ENSMUST00000125782	ENSMUSP00000146017	TRANSLATION	nonsense_mediated_decay	-	-	2	65	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008373	Prpf31	ENSMUST00000179769	ENSMUSP00000136031	TRANSLATION	protein_coding	-	CCDS51965.1	1	493	0	12	0.5	419.3	0	-4,-5	-	-	10.566	MINOR
ENSMUSG00000008373	Prpf31	ENSMUST00000143231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025789	St8sia2	ENSMUST00000191970	ENSMUSP00000141307	TRANSLATION	protein_coding	stop	-	5	206	7	2.4	0	128.2	0	1,-4	-	-	-1	MINOR
ENSMUSG00000025789	St8sia2	ENSMUST00000026896	ENSMUSP00000026896	TRANSLATION	protein_coding	-	CCDS21365.1	1	375	13	4.04	10.8	247.1	0	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000063120	Olfr480	ENSMUST00000217653	ENSMUSP00000149301	TRANSLATION	protein_coding	-	-	3	312	0	0.42	6.4	169.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000063120	Olfr480	ENSMUST00000071658	ENSMUSP00000071583	TRANSLATION	protein_coding	-	CCDS21702.1	-	342	0	0.42	0.5	169.4	5	-4,-7	-	-	12	MINOR
ENSMUSG00000030409	Dmpk	ENSMUST00000142725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000152050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000143938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030409	Dmpk	ENSMUST00000122999	ENSMUSP00000123516	TRANSLATION	protein_coding	stop	-	3	139	10	3.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030409	Dmpk	ENSMUST00000132115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000149188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000108473	ENSMUSP00000104113	TRANSLATION	protein_coding	-	CCDS52054.1	1	537	20	10.9	1.5	265.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000030409	Dmpk	ENSMUST00000238982	ENSMUSP00000158930	TRANSLATION	protein_coding	-	-	-	627	20	10.9	0.5	265.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000030409	Dmpk	ENSMUST00000154199	ENSMUSP00000118459	TRANSLATION	nonsense_mediated_decay	-	-	1	588	20	10.9	0	265.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030409	Dmpk	ENSMUST00000140742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030409	Dmpk	ENSMUST00000108474	ENSMUSP00000104114	TRANSLATION	protein_coding	-	CCDS52053.1	1	605	20	10.15	0.5	262.3	0	-4,-7	-	-	16.314	MINOR
ENSMUSG00000030409	Dmpk	ENSMUST00000128422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000137219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030409	Dmpk	ENSMUST00000032568	ENSMUSP00000032568	TRANSLATION	protein_coding	-	CCDS39794.1	5	631	20	10.9	1.5	265.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000030409	Dmpk	ENSMUST00000135839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030409	Dmpk	ENSMUST00000147215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000148380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030409	Dmpk	ENSMUST00000148472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030409	Dmpk	ENSMUST00000126264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054612	Mgmt	ENSMUST00000081510	ENSMUSP00000080224	TRANSLATION	protein_coding	-	CCDS21945.1	1	211	4	3.7	1.5	176.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000073906	Olfr692	ENSMUST00000217827	ENSMUSP00000151295	TRANSLATION	protein_coding	-	CCDS21648.1	-	329	0	0.2	0.5	302.2	9	-4,-7	-	-	12	MINOR
ENSMUSG00000073906	Olfr692	ENSMUST00000098152	ENSMUSP00000095755	TRANSLATION	protein_coding	-	-	-	320	0	0.2	5.8	302.2	9	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000064223	Olfr694	ENSMUST00000082091	ENSMUSP00000080740	TRANSLATION	protein_coding	-	CCDS21666.1	-	315	0	0.36	2.8	158.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064223	Olfr694	ENSMUST00000216118	ENSMUSP00000150217	TRANSLATION	protein_coding	-	CCDS21666.1	5	315	0	0.36	2.8	158.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064223	Olfr694	ENSMUST00000052535	ENSMUSP00000057180	TRANSLATION	protein_coding	-	CCDS21666.1	3	315	0	0.36	2.8	158.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064223	Olfr694	ENSMUST00000216895	ENSMUSP00000151027	TRANSLATION	protein_coding	-	CCDS21666.1	5	315	0	0.36	2.8	158.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000012777	Acp4	ENSMUST00000118216	ENSMUSP00000112922	TRANSLATION	protein_coding	-	CCDS57546.1	5	425	8	6.65	1.5	80.5	1	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000012777	Acp4	ENSMUST00000012921	ENSMUSP00000012921	TRANSLATION	protein_coding	stop	-	5	392	8	5.95	0	63.4	1	3,-1	-	-	-1	MINOR
ENSMUSG00000012777	Acp4	ENSMUST00000107945	ENSMUSP00000103578	TRANSLATION	protein_coding	stop	-	5	486	8	6.65	0	80.5	0	3,-1	-	-	-1	MINOR
ENSMUSG00000049739	Zfp646	ENSMUST00000205364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049739	Zfp646	ENSMUST00000206340	ENSMUSP00000145675	TRANSLATION	protein_coding	start	-	-	1562	95	0.28	0	262.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049739	Zfp646	ENSMUST00000050383	ENSMUSP00000052641	TRANSLATION	protein_coding	-	CCDS21882.1	1	1788	102	0.28	0.5	302.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049739	Zfp646	ENSMUST00000131000	ENSMUSP00000115499	TRANSLATION	protein_coding	stop	-	1	512	36	0.28	0	166.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060962	Dmkn	ENSMUST00000085691	ENSMUSP00000082834	TRANSLATION	protein_coding	-	CCDS39892.1	1	508	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:4
ENSMUSG00000060962	Dmkn	ENSMUST00000188578	ENSMUSP00000140196	TRANSLATION	protein_coding	start	-	5	303	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060962	Dmkn	ENSMUST00000165887	ENSMUSP00000129031	TRANSLATION	protein_coding	-	CCDS52183.1	1	524	0	0	0.5	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000060962	Dmkn	ENSMUST00000041703	ENSMUSP00000042300	TRANSLATION	protein_coding	-	CCDS39893.1	1	104	0	0	1.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000060962	Dmkn	ENSMUST00000085688	ENSMUSP00000082831	TRANSLATION	protein_coding	-	CCDS52184.1	1	493	0	0	0.5	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000060962	Dmkn	ENSMUST00000054427	ENSMUSP00000060362	TRANSLATION	protein_coding	-	-	5	517	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000055319	Sec23ip	ENSMUST00000206504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055319	Sec23ip	ENSMUST00000042942	ENSMUSP00000035610	TRANSLATION	protein_coding	-	CCDS21900.1	1	998	0	1.28	1.5	238.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055319	Sec23ip	ENSMUST00000206986	ENSMUSP00000145911	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055319	Sec23ip	ENSMUST00000205856	ENSMUSP00000145816	TRANSLATION	nonsense_mediated_decay	start	-	3	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030724	Cd19	ENSMUST00000205848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030724	Cd19	ENSMUST00000032968	ENSMUSP00000032968	TRANSLATION	protein_coding	-	-	1	546	0	0	1.5	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000030724	Cd19	ENSMUST00000205997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030724	Cd19	ENSMUST00000206325	ENSMUSP00000145803	TRANSLATION	protein_coding	-	CCDS21828.1	1	547	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000030724	Cd19	ENSMUST00000206871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070366	Plpp4	ENSMUST00000094018	ENSMUSP00000091557	TRANSLATION	protein_coding	-	CCDS40154.1	1	271	0	0	9.6	96.9	7	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000070366	Plpp4	ENSMUST00000206551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070366	Plpp4	ENSMUST00000205630	ENSMUSP00000145851	TRANSLATION	nonsense_mediated_decay	-	-	1	118	0	0	0	0	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000070366	Plpp4	ENSMUST00000206918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070366	Plpp4	ENSMUST00000205896	ENSMUSP00000145944	TRANSLATION	protein_coding	-	-	5	156	0	0	0	0	4	-3,-5	-	-	0	MINOR
ENSMUSG00000096467	Scgb2b19	ENSMUST00000179688	ENSMUSP00000136155	TRANSLATION	protein_coding	-	CCDS59729.1	1	112	0	1.67	0.5	97.5	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053228	Ceacam3	ENSMUST00000108491	ENSMUSP00000104131	TRANSLATION	protein_coding	-	CCDS57499.1	5	706	0	3.96	0.5	220.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000030591	Psmd8	ENSMUST00000208461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030591	Psmd8	ENSMUST00000209034	ENSMUSP00000146882	TRANSLATION	protein_coding	-	-	2	253	0	5.8292	0	112.1	0	-4,-7	-	-	7.368	MINOR
ENSMUSG00000030591	Psmd8	ENSMUST00000208592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030591	Psmd8	ENSMUST00000207087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030591	Psmd8	ENSMUST00000186182	ENSMUSP00000139514	TRANSLATION	protein_coding	-	CCDS52169.1	1	353	0	7.75	1.5	125.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030591	Psmd8	ENSMUST00000059642	ENSMUSP00000051657	TRANSLATION	protein_coding	-	CCDS52169.1	1	353	0	7.75	1.5	125.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030591	Psmd8	ENSMUST00000182328	ENSMUSP00000138613	TRANSLATION	protein_coding	-	-	1	289	0	6.75	1.2	125.3	0	-4,-7	-	-	10.002	MINOR
ENSMUSG00000093853	Vmn1r151	ENSMUST00000166079	ENSMUSP00000127282	TRANSLATION	protein_coding	-	CCDS52115.1	-	305	0	0	1.5	55.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057092	Fxyd3	ENSMUST00000186929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000165862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000165465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000171359	ENSMUSP00000128610	TRANSLATION	protein_coding	stop	-	3	71	3	1.944	1.2	94.5	1	3,-1	-	-	-1	MINOR
ENSMUSG00000057092	Fxyd3	ENSMUST00000169313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000072331	ENSMUSP00000144534	TRANSLATION	protein_coding	-	-	2	32	0	0.83	0	0	0	-4,-5	-	-	2.19	MINOR
ENSMUSG00000057092	Fxyd3	ENSMUST00000165265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000186839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000169424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000170456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057092	Fxyd3	ENSMUST00000167369	ENSMUSP00000130245	TRANSLATION	protein_coding	-	CCDS21125.1	1	88	3	2.274	8.8	94.5	1	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000096228	Olfr5	ENSMUST00000086318	ENSMUSP00000083498	TRANSLATION	protein_coding	-	CCDS57479.1	3	312	0	0.2	5.1	167.4	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096228	Olfr5	ENSMUST00000209866	ENSMUSP00000147586	TRANSLATION	protein_coding	-	CCDS57479.1	5	312	0	0.2	5.1	167.4	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053046	Brsk2	ENSMUST00000173941	ENSMUSP00000133296	TRANSLATION	protein_coding	start	-	3	47	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000174405	ENSMUSP00000134289	TRANSLATION	nonsense_mediated_decay	-	-	1	92	9	2.75	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000173285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053046	Brsk2	ENSMUST00000172967	ENSMUSP00000133750	TRANSLATION	nonsense_mediated_decay	start	-	5	614	13	11.31	0	225.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000174237	ENSMUSP00000134566	TRANSLATION	protein_coding	start/stop	-	3	232	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000173705	ENSMUSP00000134170	TRANSLATION	nonsense_mediated_decay	start	-	5	113	1	3.33	0	80.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000105989	ENSMUSP00000101610	TRANSLATION	protein_coding	-	CCDS22023.1	5	675	18	13.39	2.9	242	1	-4,-5	-	-	18.613	ALTERNATIVE:2
ENSMUSG00000053046	Brsk2	ENSMUST00000173313	ENSMUSP00000133868	TRANSLATION	protein_coding	start	-	5	200	0	3.08	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000075528	ENSMUSP00000074969	TRANSLATION	protein_coding	-	CCDS22022.1	1	719	18	13.39	4.1	242	1	-4,-5	-	-	19	PRINCIPAL:4
ENSMUSG00000053046	Brsk2	ENSMUST00000173924	ENSMUSP00000134153	TRANSLATION	nonsense_mediated_decay	start	-	5	504	4	8.64	0	99.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000172652	ENSMUSP00000133438	TRANSLATION	protein_coding	-	-	5	697	18	13.39	0	242	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000053046	Brsk2	ENSMUST00000078200	ENSMUSP00000077330	TRANSLATION	protein_coding	-	CCDS22023.1	1	675	18	13.39	2.9	242	1	-4,-5	-	-	18.613	ALTERNATIVE:2
ENSMUSG00000053046	Brsk2	ENSMUST00000174309	ENSMUSP00000134310	TRANSLATION	nonsense_mediated_decay	start	-	5	486	0	8.06	0	42.8	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000053046	Brsk2	ENSMUST00000174499	ENSMUSP00000134201	TRANSLATION	protein_coding	-	-	5	735	18	13.39	3.6	242	1	-4,-5	-	-	18.839	ALTERNATIVE:2
ENSMUSG00000053046	Brsk2	ENSMUST00000018971	ENSMUSP00000018971	TRANSLATION	protein_coding	-	CCDS22021.1	1	653	18	13.39	1.7	242	1	-4,-5	-	-	18.226	ALTERNATIVE:2
ENSMUSG00000053046	Brsk2	ENSMUST00000173330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053046	Brsk2	ENSMUST00000210065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036570	Fxyd1	ENSMUST00000206860	ENSMUSP00000146288	TRANSLATION	protein_coding	-	CCDS21123.1	5	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000206030	ENSMUSP00000146129	TRANSLATION	protein_coding	start	-	1	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036570	Fxyd1	ENSMUST00000071697	ENSMUSP00000071617	TRANSLATION	protein_coding	-	CCDS21123.1	3	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000205807	ENSMUSP00000145990	TRANSLATION	protein_coding	-	-	3	67	0	1.66	0	0	0	3,-2	-	-	4.134	MINOR
ENSMUSG00000036570	Fxyd1	ENSMUST00000206522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036570	Fxyd1	ENSMUST00000206474	ENSMUSP00000145920	TRANSLATION	protein_coding	-	CCDS21123.1	1	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000039909	ENSMUSP00000048460	TRANSLATION	protein_coding	-	CCDS21123.1	5	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000206012	ENSMUSP00000146295	TRANSLATION	protein_coding	-	CCDS21123.1	5	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000206317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036570	Fxyd1	ENSMUST00000205542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036570	Fxyd1	ENSMUST00000205778	ENSMUSP00000145818	TRANSLATION	protein_coding	-	CCDS21123.1	3	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000205917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036570	Fxyd1	ENSMUST00000206328	ENSMUSP00000145712	TRANSLATION	protein_coding	-	CCDS21123.1	3	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000108110	ENSMUSP00000103745	TRANSLATION	protein_coding	-	CCDS21123.1	1	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000205392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036570	Fxyd1	ENSMUST00000205439	ENSMUSP00000146064	TRANSLATION	protein_coding	-	CCDS21123.1	5	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000036570	Fxyd1	ENSMUST00000206305	ENSMUSP00000145589	TRANSLATION	protein_coding	-	CCDS21123.1	1	92	3	2.41	6.3	95.9	1	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000108367	Erfl	ENSMUST00000206705	ENSMUSP00000146932	TRANSLATION	protein_coding	-	-	5	352	0	2.05	1.7	113.7	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058325	Dock1	ENSMUST00000211570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058325	Dock1	ENSMUST00000210121	ENSMUSP00000147797	TRANSLATION	protein_coding	start	-	5	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058325	Dock1	ENSMUST00000210464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058325	Dock1	ENSMUST00000210617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058325	Dock1	ENSMUST00000211593	ENSMUSP00000147945	TRANSLATION	protein_coding	-	-	1	713	0	9.95	0	634.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000058325	Dock1	ENSMUST00000084488	ENSMUSP00000081531	TRANSLATION	protein_coding	-	CCDS40166.1	5	1865	0	20.9	4.1	972.7	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000059273	Zc3h4	ENSMUST00000214735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059273	Zc3h4	ENSMUST00000209374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059273	Zc3h4	ENSMUST00000098789	ENSMUSP00000096386	TRANSLATION	protein_coding	-	CCDS52040.1	5	1255	12	2.6	1.5	21.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000059273	Zc3h4	ENSMUST00000209289	ENSMUSP00000147665	TRANSLATION	protein_coding	-	-	5	1180	12	2.6	0	21.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030924	Rexo5	ENSMUST00000151248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030924	Rexo5	ENSMUST00000033218	ENSMUSP00000033218	TRANSLATION	protein_coding	-	CCDS21787.1	1	479	2	2.32	0.5	0	0	-4,-5	-	-	2.001	MINOR
ENSMUSG00000030924	Rexo5	ENSMUST00000133758	ENSMUSP00000121086	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030924	Rexo5	ENSMUST00000155938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030924	Rexo5	ENSMUST00000106520	ENSMUSP00000102130	TRANSLATION	protein_coding	-	-	5	759	3	5.424	0	27	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000030924	Rexo5	ENSMUST00000207042	ENSMUSP00000146631	TRANSLATION	protein_coding	start	-	5	124	1	1.99	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030924	Rexo5	ENSMUST00000208789	ENSMUSP00000146928	TRANSLATION	nonsense_mediated_decay	start	-	3	85	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030924	Rexo5	ENSMUST00000138689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030924	Rexo5	ENSMUST00000149132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030924	Rexo5	ENSMUST00000137015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030924	Rexo5	ENSMUST00000084644	ENSMUSP00000081694	TRANSLATION	protein_coding	-	CCDS21788.1	1	445	3	5.264	0.5	27	0	-4,-5	-	-	14.682	PRINCIPAL:2
ENSMUSG00000059070	Rpl18	ENSMUST00000209723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059070	Rpl18	ENSMUST00000209287	ENSMUSP00000147918	TRANSLATION	protein_coding	-	-	3	136	0	0	0.5	231.5	0	-4,-2	-	-	0.732	MINOR
ENSMUSG00000059070	Rpl18	ENSMUST00000211435	ENSMUSP00000147862	TRANSLATION	protein_coding	stop	-	2	126	0	0	0	194.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059070	Rpl18	ENSMUST00000209693	ENSMUSP00000148055	TRANSLATION	protein_coding	-	-	5	155	0	0	0	147.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059070	Rpl18	ENSMUST00000210640	ENSMUSP00000147816	TRANSLATION	protein_coding	-	CCDS39958.1	1	188	0	0	12.8	319.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000059070	Rpl18	ENSMUST00000211061	ENSMUSP00000147257	TRANSLATION	protein_coding	-	-	5	159	0	0	1.2	278.9	0	-4,0	-	-	3.644	MINOR
ENSMUSG00000059070	Rpl18	ENSMUST00000072503	ENSMUSP00000072320	TRANSLATION	protein_coding	-	CCDS39958.1	1	188	0	0	12.8	319.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000059070	Rpl18	ENSMUST00000211425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059070	Rpl18	ENSMUST00000211325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059070	Rpl18	ENSMUST00000209556	ENSMUSP00000147770	TRANSLATION	protein_coding	start	-	5	80	0	0	0	55.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000059070	Rpl18	ENSMUST00000209867	ENSMUSP00000147725	TRANSLATION	protein_coding	start	-	5	57	0	0	0	65.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025324	Atp10a	ENSMUST00000207668	ENSMUSP00000146388	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	76.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025324	Atp10a	ENSMUST00000168747	ENSMUSP00000129811	TRANSLATION	protein_coding	-	CCDS39972.1	1	1508	6	1.345	1.5	386.7	10	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000094221	Vmn1r124	ENSMUST00000105200	ENSMUSP00000100835	TRANSLATION	protein_coding	-	CCDS52092.1	-	307	0	0	1.5	49.9	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000047586	Nccrp1	ENSMUST00000239002	ENSMUSP00000159104	TRANSLATION	protein_coding	-	-	-	266	0	3.08	0	136.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047586	Nccrp1	ENSMUST00000057974	ENSMUSP00000055562	TRANSLATION	protein_coding	-	CCDS39862.1	1	291	0	3.08	1.5	136.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030872	Gga2	ENSMUST00000131081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030872	Gga2	ENSMUST00000124566	ENSMUSP00000115581	TRANSLATION	nonsense_mediated_decay	-	-	2	603	5	11.4	0.5	305.5	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000030872	Gga2	ENSMUST00000144779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030872	Gga2	ENSMUST00000033160	ENSMUSP00000033160	TRANSLATION	protein_coding	-	CCDS40116.1	1	603	5	11.4	0.5	305.5	0	-3,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000030872	Gga2	ENSMUST00000145277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030872	Gga2	ENSMUST00000138441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047031	Vmn1r68	ENSMUST00000238012	ENSMUSP00000157911	TRANSLATION	nonsense_mediated_decay	-	-	-	319	0	0	0.5	110	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000047031	Vmn1r68	ENSMUST00000235324	ENSMUSP00000158011	TRANSLATION	nonsense_mediated_decay	-	-	-	269	0	0	0	105.7	6	-4,-2	-	-	-1	MINOR
ENSMUSG00000047031	Vmn1r68	ENSMUST00000238003	ENSMUSP00000157653	TRANSLATION	nonsense_mediated_decay	-	-	-	319	0	0	0.5	110	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000047031	Vmn1r68	ENSMUST00000058362	ENSMUSP00000050927	TRANSLATION	protein_coding	-	CCDS52009.1	-	319	0	0	0.5	110	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047031	Vmn1r68	ENSMUST00000236246	ENSMUSP00000157627	TRANSLATION	protein_coding	-	CCDS52009.1	-	319	0	0	0.5	110	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000070799	Psg26	ENSMUST00000094798	ENSMUSP00000092392	TRANSLATION	protein_coding	-	CCDS20871.1	1	475	0	2.8	0.5	159.4	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078810	Gp6	ENSMUST00000206928	ENSMUSP00000145740	TRANSLATION	protein_coding	-	CCDS51972.1	1	313	0	3.26	0.5	71.7	1	-1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000078810	Gp6	ENSMUST00000108590	ENSMUSP00000104231	TRANSLATION	protein_coding	-	-	1	296	0	3.06	0	71.7	1	-1,-3	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000040725	Hnrnpul1	ENSMUST00000043765	ENSMUSP00000037268	TRANSLATION	protein_coding	-	-	1	759	9	2.76	1.5	178.6	0	-4,-5	-	-	14.13	MINOR
ENSMUSG00000040725	Hnrnpul1	ENSMUST00000206832	ENSMUSP00000146263	TRANSLATION	protein_coding	-	CCDS20995.1	1	859	9	3.56	1.5	216.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000040725	Hnrnpul1	ENSMUST00000108401	ENSMUSP00000104038	TRANSLATION	protein_coding	-	CCDS39841.1	1	340	0	2.612	0.5	71	0	-4,-6	-	-	4.104	MINOR
ENSMUSG00000040725	Hnrnpul1	ENSMUST00000206260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040725	Hnrnpul1	ENSMUST00000206041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101436	Gm5157	ENSMUST00000185914	ENSMUSP00000140639	TRANSLATION	protein_coding	-	-	1	301	16	1	0.5	238.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025102	3110040N11Rik	ENSMUST00000154937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025102	3110040N11Rik	ENSMUST00000141075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025102	3110040N11Rik	ENSMUST00000152620	ENSMUSP00000120526	TRANSLATION	nonsense_mediated_decay	-	-	2	45	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025102	3110040N11Rik	ENSMUST00000142557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025102	3110040N11Rik	ENSMUST00000026092	ENSMUSP00000026092	TRANSLATION	protein_coding	-	CCDS40010.1	1	126	0	1.28	2.7	88.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037640	Zfp60	ENSMUST00000136373	ENSMUSP00000117049	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	1	0	84.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037640	Zfp60	ENSMUST00000108336	ENSMUSP00000103973	TRANSLATION	protein_coding	-	CCDS21030.1	1	704	76	1.2	0.5	413.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037640	Zfp60	ENSMUST00000125228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037640	Zfp60	ENSMUST00000126884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037640	Zfp60	ENSMUST00000042641	ENSMUSP00000036627	TRANSLATION	protein_coding	-	CCDS21030.1	1	704	76	1.2	0.5	413.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037640	Zfp60	ENSMUST00000130997	ENSMUSP00000118469	TRANSLATION	protein_coding	stop	-	3	105	0	1	0	81	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037640	Zfp60	ENSMUST00000167955	ENSMUSP00000132607	TRANSLATION	protein_coding	-	CCDS21030.1	2	704	76	1.2	0.5	413.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037640	Zfp60	ENSMUST00000141753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073997	Olfr521	ENSMUST00000098263	ENSMUSP00000095863	TRANSLATION	protein_coding	-	CCDS21487.1	-	321	0	0.36	3.9	211.5	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000073997	Olfr521	ENSMUST00000219663	ENSMUSP00000151365	TRANSLATION	protein_coding	-	CCDS21487.1	5	321	0	0.36	3.9	211.5	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000073997	Olfr521	ENSMUST00000220001	ENSMUSP00000151473	TRANSLATION	protein_coding	-	CCDS21487.1	5	321	0	0.36	3.9	211.5	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000053550	Shisa7	ENSMUST00000119433	ENSMUSP00000112423	TRANSLATION	protein_coding	-	CCDS71882.1	1	541	0	0.2	0.5	78.3	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000053550	Shisa7	ENSMUST00000117452	ENSMUSP00000112405	TRANSLATION	protein_coding	start	-	1	375	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000053550	Shisa7	ENSMUST00000157068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053550	Shisa7	ENSMUST00000132806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053550	Shisa7	ENSMUST00000066041	ENSMUSP00000064886	TRANSLATION	protein_coding	-	-	1	558	0	0.2	1.5	78.3	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000048583	Igf2	ENSMUST00000000033	ENSMUSP00000000033	TRANSLATION	protein_coding	-	CCDS52458.1	1	180	0	2.4	7.5	124.6	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000048583	Igf2	ENSMUST00000097936	ENSMUSP00000095549	TRANSLATION	protein_coding	-	CCDS52458.1	5	180	0	2.4	7.5	124.6	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000048583	Igf2	ENSMUST00000105936	ENSMUSP00000101556	TRANSLATION	protein_coding	-	CCDS52458.1	2	180	0	2.4	7.5	124.6	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000048583	Igf2	ENSMUST00000163148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048583	Igf2	ENSMUST00000178921	ENSMUSP00000136786	TRANSLATION	protein_coding	stop	-	5	121	0	2	0	32.3	0	-2,2	-	-	-1	MINOR
ENSMUSG00000048583	Igf2	ENSMUST00000145896	ENSMUSP00000122653	TRANSLATION	protein_coding	stop	-	5	103	0	2.4	0	32.3	0	2,-3	-	-	-1	MINOR
ENSMUSG00000048583	Igf2	ENSMUST00000143666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048583	Igf2	ENSMUST00000105935	ENSMUSP00000101555	TRANSLATION	protein_coding	-	CCDS52458.1	3	180	0	2.4	7.5	124.6	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000048583	Igf2	ENSMUST00000121128	ENSMUSP00000114076	TRANSLATION	protein_coding	-	CCDS22033.2	2	191	0	2.4	1.5	124.6	0	0,-3	-	-	12.231	MINOR
ENSMUSG00000003273	Car11	ENSMUST00000211259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003273	Car11	ENSMUST00000210027	ENSMUSP00000148222	TRANSLATION	nonsense_mediated_decay	start	-	5	26	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003273	Car11	ENSMUST00000209796	ENSMUSP00000147551	TRANSLATION	nonsense_mediated_decay	start	-	5	82	0	1.8	0	20.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003273	Car11	ENSMUST00000210872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003273	Car11	ENSMUST00000003360	ENSMUSP00000003360	TRANSLATION	protein_coding	-	CCDS21259.1	1	328	0	4.9024	8.8	184.4	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000038371	Sbf2	ENSMUST00000164759	ENSMUSP00000132072	TRANSLATION	protein_coding	-	-	5	1847	0	11.673	1.5	973.4	0	-4,-5	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000038371	Sbf2	ENSMUST00000166885	ENSMUSP00000130476	TRANSLATION	protein_coding	start/stop	-	5	198	0	2.6	0	152.9	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000171378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038371	Sbf2	ENSMUST00000165992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038371	Sbf2	ENSMUST00000164599	ENSMUSP00000131927	TRANSLATION	protein_coding	start/stop	-	5	339	0	2.76	0	113.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000171218	ENSMUSP00000129805	TRANSLATION	protein_coding	-	-	1	408	0	3.963	0	260.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000166020	ENSMUSP00000126217	TRANSLATION	protein_coding	-	-	5	1826	0	12.028	1	899.7	0	-4,-5	-	-	7.29	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000167652	ENSMUSP00000127105	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000169740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038371	Sbf2	ENSMUST00000165449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038371	Sbf2	ENSMUST00000164559	ENSMUSP00000128265	TRANSLATION	protein_coding	start/stop	-	5	177	0	0.758	0	40.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000164525	ENSMUSP00000128340	TRANSLATION	protein_coding	start/stop	-	5	245	0	1.76	0	63.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038371	Sbf2	ENSMUST00000211732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038371	Sbf2	ENSMUST00000033058	ENSMUSP00000033058	TRANSLATION	protein_coding	-	CCDS52361.1	5	1872	0	12.173	1.5	971.9	0	-4,-5	-	-	11.91	PRINCIPAL:2
ENSMUSG00000038371	Sbf2	ENSMUST00000167880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030779	Rbbp6	ENSMUST00000156738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030779	Rbbp6	ENSMUST00000098062	ENSMUSP00000095670	TRANSLATION	protein_coding	-	CCDS21817.1	1	123	0	1.816	0.5	110.4	0	-4,-5	-	-	3.054	MINOR
ENSMUSG00000030779	Rbbp6	ENSMUST00000148880	ENSMUSP00000115530	TRANSLATION	protein_coding	stop	-	5	79	0	1.75	0	110.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030779	Rbbp6	ENSMUST00000205495	ENSMUSP00000145759	TRANSLATION	protein_coding	start	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030779	Rbbp6	ENSMUST00000071590	ENSMUSP00000071519	TRANSLATION	protein_coding	-	-	5	1756	10	6.216	0.5	159.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030779	Rbbp6	ENSMUST00000137860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030779	Rbbp6	ENSMUST00000126053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030779	Rbbp6	ENSMUST00000231323	ENSMUSP00000155989	TRANSLATION	protein_coding	stop	-	-	1759	10	6.216	0	159.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030779	Rbbp6	ENSMUST00000052135	ENSMUSP00000049528	TRANSLATION	protein_coding	-	CCDS52387.1	5	1790	10	6.216	0.5	159.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000030779	Rbbp6	ENSMUST00000206179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000205863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000148001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000121882	ENSMUSP00000113273	TRANSLATION	protein_coding	-	CCDS21394.1	5	377	0	2.95	1.5	123.6	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000038930	Rccd1	ENSMUST00000123189	ENSMUSP00000121884	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000038930	Rccd1	ENSMUST00000134288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000144685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000130888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000123109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038930	Rccd1	ENSMUST00000047362	ENSMUSP00000048043	TRANSLATION	protein_coding	-	CCDS21394.1	1	377	0	2.95	1.5	123.6	0	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000038930	Rccd1	ENSMUST00000155124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078566	Bnip3	ENSMUST00000148970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078566	Bnip3	ENSMUST00000125359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078566	Bnip3	ENSMUST00000106112	ENSMUSP00000101718	TRANSLATION	protein_coding	-	CCDS40168.1	1	187	0	1.5	1.5	269.2	2	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078566	Bnip3	ENSMUST00000130500	ENSMUSP00000148170	TRANSLATION	protein_coding	-	-	2	173	0	1	0	245.8	1	-4,-5	-	-	8.598	MINOR
ENSMUSG00000078566	Bnip3	ENSMUST00000141223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052707	Tnrc6a	ENSMUST00000206458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052707	Tnrc6a	ENSMUST00000205789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052707	Tnrc6a	ENSMUST00000205514	ENSMUSP00000145912	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052707	Tnrc6a	ENSMUST00000206126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052707	Tnrc6a	ENSMUST00000206014	ENSMUSP00000146300	TRANSLATION	protein_coding	start/stop	-	3	154	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052707	Tnrc6a	ENSMUST00000206888	ENSMUSP00000145963	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052707	Tnrc6a	ENSMUST00000205760	ENSMUSP00000146266	TRANSLATION	protein_coding	start	-	5	1398	0	2.275	0	482.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052707	Tnrc6a	ENSMUST00000205449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052707	Tnrc6a	ENSMUST00000094053	ENSMUSP00000091595	TRANSLATION	protein_coding	-	CCDS57583.1	1	1896	0	2.275	0.5	482.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052707	Tnrc6a	ENSMUST00000205732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052707	Tnrc6a	ENSMUST00000206922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073914	Olfr677	ENSMUST00000213204	ENSMUSP00000149888	TRANSLATION	protein_coding	-	CCDS21638.1	5	312	0	0.36	8.8	397.9	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073914	Olfr677	ENSMUST00000098161	ENSMUSP00000095764	TRANSLATION	protein_coding	-	CCDS21638.1	-	312	0	0.36	8.8	397.9	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059975	Zfp74	ENSMUST00000032797	ENSMUSP00000032797	TRANSLATION	protein_coding	-	CCDS39874.1	5	679	72	1.4	0.5	523.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059975	Zfp74	ENSMUST00000108205	ENSMUSP00000103840	TRANSLATION	protein_coding	-	CCDS39874.1	1	679	72	1.4	0.5	523.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059975	Zfp74	ENSMUST00000108212	ENSMUSP00000103847	TRANSLATION	protein_coding	-	-	1	153	0	1	0	90.8	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000059975	Zfp74	ENSMUST00000149793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059975	Zfp74	ENSMUST00000108211	ENSMUSP00000103846	TRANSLATION	protein_coding	-	-	1	153	0	1	0	90.8	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000050855	Zfp940	ENSMUST00000108223	ENSMUSP00000103858	TRANSLATION	protein_coding	-	-	1	128	0	1	0	84.5	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000050855	Zfp940	ENSMUST00000145098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050855	Zfp940	ENSMUST00000128205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050855	Zfp940	ENSMUST00000085792	ENSMUSP00000082947	TRANSLATION	protein_coding	-	CCDS39873.1	1	566	40	1.4	0.5	271.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000059077	Pth	ENSMUST00000079793	ENSMUSP00000078723	TRANSLATION	protein_coding	-	CCDS21756.1	1	115	0	0.8	6.3	27.3	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000030469	Zfp719	ENSMUST00000147075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030469	Zfp719	ENSMUST00000058104	ENSMUSP00000050968	TRANSLATION	protein_coding	-	CCDS52225.1	1	735	55	1.9	0.5	335	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030469	Zfp719	ENSMUST00000205769	ENSMUSP00000145695	TRANSLATION	protein_coding	stop	-	3	118	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046410	Kcnk6	ENSMUST00000085818	ENSMUSP00000082975	TRANSLATION	protein_coding	-	CCDS21068.1	1	313	0	2.2	1.5	126.5	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046410	Kcnk6	ENSMUST00000208807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049130	C5ar1	ENSMUST00000050770	ENSMUSP00000060003	TRANSLATION	protein_coding	-	CCDS20846.1	3	351	0	1.08	1.5	139.6	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049130	C5ar1	ENSMUST00000209442	ENSMUSP00000148140	TRANSLATION	protein_coding	stop	-	3	181	0	0.64	0	82.7	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000049130	C5ar1	ENSMUST00000168818	ENSMUSP00000129972	TRANSLATION	protein_coding	-	CCDS20846.1	1	351	0	1.08	1.5	139.6	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045467	Ttll13	ENSMUST00000206240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045467	Ttll13	ENSMUST00000058266	ENSMUSP00000062795	TRANSLATION	protein_coding	-	CCDS39996.1	5	804	15	5.945	0.5	294.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045467	Ttll13	ENSMUST00000205270	ENSMUSP00000145702	TRANSLATION	protein_coding	start	-	1	794	15	5.945	0	294.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045467	Ttll13	ENSMUST00000133958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045467	Ttll13	ENSMUST00000107381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045795	Whamm	ENSMUST00000209044	ENSMUSP00000146854	TRANSLATION	protein_coding	-	-	1	489	0	0	0	382.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045795	Whamm	ENSMUST00000207123	ENSMUSP00000146687	TRANSLATION	nonsense_mediated_decay	-	-	5	248	0	0	0	298.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045795	Whamm	ENSMUST00000165460	ENSMUSP00000128881	TRANSLATION	protein_coding	-	CCDS52283.1	1	793	0	0	0.5	627.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051184	Zfp524	ENSMUST00000209030	ENSMUSP00000147095	TRANSLATION	protein_coding	-	CCDS20752.1	5	321	16	0.2	0.5	38.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051184	Zfp524	ENSMUST00000086349	ENSMUSP00000083533	TRANSLATION	protein_coding	-	CCDS20752.1	1	321	16	0.2	0.5	38.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051184	Zfp524	ENSMUST00000207901	ENSMUSP00000146921	TRANSLATION	protein_coding	-	CCDS20752.1	5	321	16	0.2	0.5	38.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031098	Syt8	ENSMUST00000118276	ENSMUSP00000113545	TRANSLATION	protein_coding	-	CCDS22030.1	1	395	4	4.9	0.5	107	3	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000031098	Syt8	ENSMUST00000122393	ENSMUSP00000112689	TRANSLATION	protein_coding	-	CCDS72070.1	1	395	4	4.9	1.5	107	3	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000031098	Syt8	ENSMUST00000097939	ENSMUSP00000095552	TRANSLATION	protein_coding	-	CCDS72071.1	1	389	4	4.9	0.5	107	3	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000031098	Syt8	ENSMUST00000150192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031098	Syt8	ENSMUST00000145964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031098	Syt8	ENSMUST00000128481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031098	Syt8	ENSMUST00000105976	ENSMUSP00000101596	TRANSLATION	protein_coding	-	CCDS72071.1	1	389	4	4.9	0.5	107	3	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000031098	Syt8	ENSMUST00000105977	ENSMUSP00000101597	TRANSLATION	protein_coding	stop	-	5	89	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000031098	Syt8	ENSMUST00000210746	ENSMUSP00000147572	TRANSLATION	nonsense_mediated_decay	start	-	5	57	3	1	0	29.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031098	Syt8	ENSMUST00000124963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031098	Syt8	ENSMUST00000148896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042308	Setd1a	ENSMUST00000144406	ENSMUSP00000115248	TRANSLATION	protein_coding	stop	-	5	247	0	1.75	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042308	Setd1a	ENSMUST00000047075	ENSMUSP00000047672	TRANSLATION	protein_coding	-	CCDS40144.1	5	1716	18	4.55	0.5	150.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042308	Setd1a	ENSMUST00000141439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042308	Setd1a	ENSMUST00000126761	ENSMUSP00000120666	TRANSLATION	protein_coding	stop	-	3	196	0	1.75	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042308	Setd1a	ENSMUST00000143951	ENSMUSP00000115994	TRANSLATION	protein_coding	stop	-	5	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042308	Setd1a	ENSMUST00000047157	ENSMUSP00000037600	TRANSLATION	protein_coding	-	CCDS40144.1	5	1716	18	4.55	0.5	150.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040841	Six5	ENSMUST00000049454	ENSMUSP00000045973	TRANSLATION	protein_coding	-	CCDS20889.1	1	719	0	1	1.5	185.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018909	Arrb1	ENSMUST00000162043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018909	Arrb1	ENSMUST00000162933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018909	Arrb1	ENSMUST00000032995	ENSMUSP00000032995	TRANSLATION	protein_coding	-	CCDS21484.1	1	410	25	11.16	5.3	236.9	0	-4,-5	-	-	18.993	MINOR
ENSMUSG00000018909	Arrb1	ENSMUST00000179755	ENSMUSP00000136963	TRANSLATION	protein_coding	-	-	5	419	25	11.3184	0	234.3	0	-4,-5	-	-	17.502	MINOR
ENSMUSG00000018909	Arrb1	ENSMUST00000098266	ENSMUSP00000095866	TRANSLATION	protein_coding	-	CCDS40032.1	1	418	25	11.49	8.8	233.3	0	-4,-5	-	-	20.784	PRINCIPAL:1
ENSMUSG00000018909	Arrb1	ENSMUST00000161525	ENSMUSP00000124483	TRANSLATION	protein_coding	stop	-	2	135	7	2.58	0	62.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018909	Arrb1	ENSMUST00000162290	ENSMUSP00000125056	TRANSLATION	protein_coding	start	-	2	121	6	3	0	30	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018909	Arrb1	ENSMUST00000159642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018909	Arrb1	ENSMUST00000162404	ENSMUSP00000124351	TRANSLATION	protein_coding	stop	-	3	118	5	3.41	0	65.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018909	Arrb1	ENSMUST00000161268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030870	Ubfd1	ENSMUST00000153640	ENSMUSP00000146254	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030870	Ubfd1	ENSMUST00000033158	ENSMUSP00000033158	TRANSLATION	protein_coding	-	CCDS21808.1	1	368	0	2	0.5	49.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030870	Ubfd1	ENSMUST00000124733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030870	Ubfd1	ENSMUST00000148060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030870	Ubfd1	ENSMUST00000133390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030413	Pglyrp1	ENSMUST00000032573	ENSMUSP00000032573	TRANSLATION	protein_coding	-	CCDS20881.1	1	182	8	3	1.5	67.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000030413	Pglyrp1	ENSMUST00000206481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030413	Pglyrp1	ENSMUST00000206206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030413	Pglyrp1	ENSMUST00000206569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095383	Vmn1r152	ENSMUST00000168326	ENSMUSP00000128566	TRANSLATION	protein_coding	-	CCDS52116.1	-	307	0	0	1.5	55.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052296	Ppp6r1	ENSMUST00000206532	ENSMUSP00000145575	TRANSLATION	protein_coding	stop	-	5	253	0	0	0	125.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052296	Ppp6r1	ENSMUST00000205374	ENSMUSP00000146290	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052296	Ppp6r1	ENSMUST00000206391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052296	Ppp6r1	ENSMUST00000206768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052296	Ppp6r1	ENSMUST00000064099	ENSMUSP00000066736	TRANSLATION	protein_coding	-	CCDS39737.1	1	856	0	0	1.5	223.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052296	Ppp6r1	ENSMUST00000206966	ENSMUSP00000146109	TRANSLATION	nonsense_mediated_decay	start	-	5	146	0	0	0	118.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049709	Nlrp10	ENSMUST00000055745	ENSMUSP00000050252	TRANSLATION	protein_coding	-	CCDS21730.1	1	673	11	1.14	0.5	179.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051048	P4ha3	ENSMUST00000148620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051048	P4ha3	ENSMUST00000208565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051048	P4ha3	ENSMUST00000139790	ENSMUSP00000117015	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000051048	P4ha3	ENSMUST00000057023	ENSMUSP00000055297	TRANSLATION	protein_coding	-	CCDS21496.1	1	542	3	6.34	1.5	156.1	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000051048	P4ha3	ENSMUST00000138465	ENSMUSP00000119159	TRANSLATION	protein_coding	start	-	1	388	3	5.3	0	30.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030515	Tarsl2	ENSMUST00000126941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030515	Tarsl2	ENSMUST00000032728	ENSMUSP00000032728	TRANSLATION	protein_coding	-	CCDS21339.1	1	790	17	14.96	0.5	280.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000030515	Tarsl2	ENSMUST00000127354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030515	Tarsl2	ENSMUST00000206323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061374	Fiz1	ENSMUST00000207030	ENSMUSP00000147082	TRANSLATION	protein_coding	-	CCDS20751.1	1	500	42	2.07	0.5	93.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061374	Fiz1	ENSMUST00000209060	ENSMUSP00000146713	TRANSLATION	protein_coding	stop	-	3	90	9	1.6	0	48.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061374	Fiz1	ENSMUST00000167804	ENSMUSP00000126765	TRANSLATION	protein_coding	-	CCDS20751.1	1	500	42	2.07	0.5	93.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061374	Fiz1	ENSMUST00000207946	ENSMUSP00000147003	TRANSLATION	protein_coding	stop	-	2	95	10	1.6	0	48.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061374	Fiz1	ENSMUST00000165320	ENSMUSP00000128105	TRANSLATION	protein_coding	-	CCDS20751.1	1	500	42	2.07	0.5	93.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061374	Fiz1	ENSMUST00000077385	ENSMUSP00000076603	TRANSLATION	protein_coding	-	CCDS20751.1	1	500	42	2.07	0.5	93.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061374	Fiz1	ENSMUST00000207691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061374	Fiz1	ENSMUST00000207412	ENSMUSP00000147036	TRANSLATION	protein_coding	stop	-	2	36	2	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061374	Fiz1	ENSMUST00000208944	ENSMUSP00000147011	TRANSLATION	protein_coding	-	CCDS20751.1	1	500	42	2.07	0.5	93.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000002204	Napsa	ENSMUST00000207543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002204	Napsa	ENSMUST00000153124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002204	Napsa	ENSMUST00000208514	ENSMUSP00000146791	TRANSLATION	nonsense_mediated_decay	start	-	3	64	0	1	0	57.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002204	Napsa	ENSMUST00000002274	ENSMUSP00000002274	TRANSLATION	protein_coding	-	CCDS21212.1	1	419	5	7.4	0.5	357.2	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000002204	Napsa	ENSMUST00000207302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096760	Vmn1r248	ENSMUST00000105196	ENSMUSP00000100831	TRANSLATION	protein_coding	-	CCDS52101.1	-	305	0	0	1.5	56.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000045639	Zfp629	ENSMUST00000151107	ENSMUSP00000139447	TRANSLATION	protein_coding	-	-	3	47	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045639	Zfp629	ENSMUST00000134446	ENSMUSP00000141017	TRANSLATION	protein_coding	-	-	1	47	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045639	Zfp629	ENSMUST00000132524	ENSMUSP00000139924	TRANSLATION	protein_coding	-	-	5	47	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045639	Zfp629	ENSMUST00000058038	ENSMUSP00000053760	TRANSLATION	protein_coding	-	CCDS21873.1	1	867	76	2	5.1	373.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045639	Zfp629	ENSMUST00000122066	ENSMUSP00000113903	TRANSLATION	protein_coding	-	CCDS21873.1	1	867	76	2	5.1	373.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045639	Zfp629	ENSMUST00000084564	ENSMUSP00000081612	TRANSLATION	protein_coding	-	CCDS21873.1	1	867	76	2	5.1	373.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045639	Zfp629	ENSMUST00000152315	ENSMUSP00000114772	TRANSLATION	protein_coding	stop	-	3	195	7	1	0	52.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045639	Zfp629	ENSMUST00000128731	ENSMUSP00000140505	TRANSLATION	protein_coding	-	-	3	115	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045639	Zfp629	ENSMUST00000131318	ENSMUSP00000116375	TRANSLATION	protein_coding	stop	-	3	244	14	2	0	88.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050100	Hmx2	ENSMUST00000051997	ENSMUSP00000058205	TRANSLATION	protein_coding	-	CCDS21918.1	1	273	0	0.6	7.5	71.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050100	Hmx2	ENSMUST00000183219	ENSMUSP00000138799	TRANSLATION	protein_coding	-	CCDS21918.1	1	273	0	0.6	7.5	71.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025103	Btbd1	ENSMUST00000208178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025103	Btbd1	ENSMUST00000026093	ENSMUSP00000026093	TRANSLATION	protein_coding	-	CCDS21407.1	1	488	0	6.11	1.5	294.3	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000025103	Btbd1	ENSMUST00000208566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025103	Btbd1	ENSMUST00000208114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036915	Kirrel2	ENSMUST00000117923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036915	Kirrel2	ENSMUST00000169893	ENSMUSP00000131161	TRANSLATION	protein_coding	start/stop	-	1	310	0	6.18	0	89.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036915	Kirrel2	ENSMUST00000140565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036915	Kirrel2	ENSMUST00000170152	ENSMUSP00000132652	TRANSLATION	protein_coding	start	-	3	175	0	0.15	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000036915	Kirrel2	ENSMUST00000045817	ENSMUSP00000039395	TRANSLATION	protein_coding	-	CCDS39883.1	1	700	0	9.3	3.9	123.3	0	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000083649	Rasl2-9	ENSMUST00000147835	ENSMUSP00000129559	TRANSLATION	protein_coding	-	CCDS20760.1	-	216	24	1	19.5	164.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000078757	Scgb1b29	ENSMUST00000108094	ENSMUSP00000103729	TRANSLATION	protein_coding	-	CCDS57538.1	1	93	0	1.78	0.5	72.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000115021	Vmn1r173	ENSMUST00000227987	ENSMUSP00000153884	TRANSLATION	protein_coding	-	CCDS52134.1	-	313	0	0	0.5	66	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115021	Vmn1r173	ENSMUST00000174055	ENSMUSP00000134645	TRANSLATION	protein_coding	-	CCDS52134.1	-	313	0	0	0.5	66	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115021	Vmn1r173	ENSMUST00000226233	ENSMUSP00000154603	TRANSLATION	protein_coding	-	CCDS52134.1	-	313	0	0	0.5	66	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035314	Gdpd5	ENSMUST00000037528	ENSMUSP00000036175	TRANSLATION	protein_coding	-	CCDS21481.1	1	607	4	2.75	7.5	53.9	8	-4,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000035314	Gdpd5	ENSMUST00000208800	ENSMUSP00000146372	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000035314	Gdpd5	ENSMUST00000207238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035314	Gdpd5	ENSMUST00000207617	ENSMUSP00000147184	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035314	Gdpd5	ENSMUST00000207530	ENSMUSP00000146887	TRANSLATION	protein_coding	stop	-	2	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035314	Gdpd5	ENSMUST00000208061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035314	Gdpd5	ENSMUST00000213887	ENSMUSP00000150361	TRANSLATION	protein_coding	-	-	5	612	4	2.75	6.3	53.9	8	-4,-2	-	-	18.445	ALTERNATIVE:1
ENSMUSG00000035314	Gdpd5	ENSMUST00000208947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066232	Ipo7	ENSMUST00000207277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066232	Ipo7	ENSMUST00000208408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066232	Ipo7	ENSMUST00000208951	ENSMUSP00000146367	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0.45	0	27.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066232	Ipo7	ENSMUST00000208821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066232	Ipo7	ENSMUST00000084731	ENSMUSP00000081782	TRANSLATION	protein_coding	-	CCDS40085.1	1	1038	0	2.33	15	108.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036733	Rbm42	ENSMUST00000042726	ENSMUSP00000040005	TRANSLATION	protein_coding	-	CCDS52179.1	1	478	0	1.6	1.5	64.4	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000036733	Rbm42	ENSMUST00000140550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036733	Rbm42	ENSMUST00000108141	ENSMUSP00000103776	TRANSLATION	protein_coding	-	-	5	449	0	1.6	1	64.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000030846	Tial1	ENSMUST00000133089	ENSMUSP00000146031	TRANSLATION	nonsense_mediated_decay	start	-	5	42	0	0.75	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000106228	ENSMUSP00000101835	TRANSLATION	protein_coding	-	CCDS85428.1	1	336	0	7.11	6.5	171.4	0	-4,-5	-	-	8.763	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000141079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030846	Tial1	ENSMUST00000106226	ENSMUSP00000101833	TRANSLATION	protein_coding	-	CCDS21897.1	1	392	0	8.34	7.5	193	0	-4,-5	-	-	12.852	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000205278	ENSMUSP00000145908	TRANSLATION	nonsense_mediated_decay	start	-	5	140	0	3.348	0	85	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000141126	ENSMUSP00000145933	TRANSLATION	protein_coding	-	-	5	244	0	4.53	0	93.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000123666	ENSMUSP00000116921	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	3.528	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000165023	ENSMUSP00000126458	TRANSLATION	protein_coding	-	CCDS85429.1	5	375	0	8.19	10	214.9	0	-4,-5	-	-	14.7	PRINCIPAL:1
ENSMUSG00000030846	Tial1	ENSMUST00000136782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030846	Tial1	ENSMUST00000205774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030846	Tial1	ENSMUST00000133444	ENSMUSP00000145943	TRANSLATION	nonsense_mediated_decay	start	-	5	106	0	2.75	0	62.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000205835	ENSMUSP00000145770	TRANSLATION	protein_coding	-	-	1	107	0	1.08	0	31.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030846	Tial1	ENSMUST00000033135	ENSMUSP00000033135	TRANSLATION	protein_coding	-	CCDS85429.1	1	375	0	8.19	10	214.9	0	-4,-5	-	-	14.7	PRINCIPAL:1
ENSMUSG00000030846	Tial1	ENSMUST00000152328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091926	Vmn2r62	ENSMUST00000169130	ENSMUSP00000130557	TRANSLATION	protein_coding	-	CCDS52219.1	5	859	3	3.4	0.5	403.2	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000066803	Vmn1r84	ENSMUST00000086228	ENSMUSP00000083405	TRANSLATION	protein_coding	-	CCDS20808.1	-	318	0	0	1.5	74.2	9	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000066803	Vmn1r84	ENSMUST00000228741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066803	Vmn1r84	ENSMUST00000227427	ENSMUSP00000154289	TRANSLATION	protein_coding	-	-	-	306	0	0	0	74.2	9	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000066803	Vmn1r84	ENSMUST00000226408	ENSMUSP00000154574	TRANSLATION	protein_coding	-	-	-	306	0	0	0	74.2	9	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000066803	Vmn1r84	ENSMUST00000228653	ENSMUSP00000154484	TRANSLATION	protein_coding	-	-	-	306	0	0	0	74.2	9	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000066803	Vmn1r84	ENSMUST00000226811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048067	Olfr1349	ENSMUST00000207820	ENSMUSP00000147127	TRANSLATION	protein_coding	-	CCDS20780.1	3	317	0	1.26	1.5	160.5	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048067	Olfr1349	ENSMUST00000213656	ENSMUSP00000149129	TRANSLATION	protein_coding	-	CCDS20780.1	5	317	0	1.26	1.5	160.5	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048067	Olfr1349	ENSMUST00000207043	ENSMUSP00000146944	TRANSLATION	protein_coding	stop	-	2	191	0	0.915	0	77	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000048067	Olfr1349	ENSMUST00000207075	ENSMUSP00000146672	TRANSLATION	protein_coding	stop	-	2	162	0	0.6	0	64.4	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000048067	Olfr1349	ENSMUST00000216447	ENSMUSP00000149880	TRANSLATION	protein_coding	-	CCDS20780.1	5	317	0	1.26	1.5	160.5	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048067	Olfr1349	ENSMUST00000213504	ENSMUSP00000151168	TRANSLATION	protein_coding	-	CCDS20780.1	2	317	0	1.26	1.5	160.5	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048067	Olfr1349	ENSMUST00000051982	ENSMUSP00000056639	TRANSLATION	protein_coding	-	CCDS20780.1	-	317	0	1.26	1.5	160.5	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030824	Nucb1	ENSMUST00000211682	ENSMUSP00000147428	TRANSLATION	protein_coding	stop	-	2	220	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030824	Nucb1	ENSMUST00000209509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030824	Nucb1	ENSMUST00000209436	ENSMUSP00000148242	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030824	Nucb1	ENSMUST00000211765	ENSMUSP00000147383	TRANSLATION	protein_coding	-	CCDS52247.1	1	459	8	3.3	2.7	38.6	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000030824	Nucb1	ENSMUST00000211343	ENSMUSP00000147756	TRANSLATION	protein_coding	stop	-	5	170	0	0	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000030824	Nucb1	ENSMUST00000210394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030824	Nucb1	ENSMUST00000210675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030824	Nucb1	ENSMUST00000210208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030824	Nucb1	ENSMUST00000210449	ENSMUSP00000147365	TRANSLATION	protein_coding	start/stop	-	5	271	8	3.3	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030824	Nucb1	ENSMUST00000033096	ENSMUSP00000033096	TRANSLATION	protein_coding	-	CCDS85300.1	5	455	8	3.3	0.5	38.6	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000035523	Vmn1r172	ENSMUST00000038694	ENSMUSP00000041653	TRANSLATION	protein_coding	-	CCDS20932.1	1	313	0	0	0.5	59.7	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035523	Vmn1r172	ENSMUST00000173101	ENSMUSP00000133887	TRANSLATION	protein_coding	-	CCDS20932.1	1	313	0	0	0.5	59.7	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049091	Sephs2	ENSMUST00000082428	ENSMUSP00000081009	TRANSLATION	protein_coding	-	CCDS21863.1	-	452	13	0.8	1.7	101.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073972	Olfr553	ENSMUST00000098222	ENSMUSP00000095825	TRANSLATION	protein_coding	-	CCDS21538.1	-	326	0	0.24	0.5	361.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073972	Olfr553	ENSMUST00000216776	ENSMUSP00000149901	TRANSLATION	protein_coding	-	CCDS21538.1	5	326	0	0.24	0.5	361.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055409	Nell1	ENSMUST00000081872	ENSMUSP00000080550	TRANSLATION	protein_coding	-	CCDS21309.1	1	810	13	5.675	7.6	238.5	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000055409	Nell1	ENSMUST00000107603	ENSMUSP00000103229	TRANSLATION	protein_coding	-	-	5	763	6	5.115	5.8	208	0	4,-1	-	-	12.561	MINOR
ENSMUSG00000055409	Nell1	ENSMUST00000145096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055409	Nell1	ENSMUST00000151721	ENSMUSP00000114706	TRANSLATION	protein_coding	stop	-	1	379	0	1.51	0	28.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000055409	Nell1	ENSMUST00000154410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059891	Tsks	ENSMUST00000120929	ENSMUSP00000112673	TRANSLATION	protein_coding	-	CCDS52240.1	1	585	0	0	1.5	973	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059891	Tsks	ENSMUST00000208475	ENSMUSP00000146743	TRANSLATION	protein_coding	start	-	5	185	0	0	0	172.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059891	Tsks	ENSMUST00000207719	ENSMUSP00000147058	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	183.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059891	Tsks	ENSMUST00000080233	ENSMUSP00000079122	TRANSLATION	protein_coding	-	CCDS39946.1	1	525	0	0	2.7	893.8	0	-4,-5	-	-	1.248	MINOR
ENSMUSG00000090958	Lrrc32	ENSMUST00000165205	ENSMUSP00000133205	TRANSLATION	protein_coding	-	CCDS52319.1	5	663	0	1.16	3.9	149.9	1	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000090958	Lrrc32	ENSMUST00000205937	ENSMUSP00000146299	TRANSLATION	protein_coding	stop	-	5	80	0	0.8	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000090958	Lrrc32	ENSMUST00000205956	ENSMUSP00000145859	TRANSLATION	protein_coding	-	CCDS52319.1	5	663	0	1.16	3.9	149.9	1	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000030512	Snrpa1	ENSMUST00000123157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030512	Snrpa1	ENSMUST00000206409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030512	Snrpa1	ENSMUST00000147702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030512	Snrpa1	ENSMUST00000206150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030512	Snrpa1	ENSMUST00000153609	ENSMUSP00000117947	TRANSLATION	protein_coding	-	CCDS21342.1	1	255	0	7	14.8	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000030512	Snrpa1	ENSMUST00000032723	ENSMUSP00000032723	TRANSLATION	nonsense_mediated_decay	-	-	1	154	0	4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030512	Snrpa1	ENSMUST00000139082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030512	Snrpa1	ENSMUST00000206166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030512	Snrpa1	ENSMUST00000138271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034957	Cebpa	ENSMUST00000205391	ENSMUSP00000145942	TRANSLATION	protein_coding	-	-	5	159	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034957	Cebpa	ENSMUST00000042985	ENSMUSP00000096129	TRANSLATION	protein_coding	-	CCDS21145.1	-	359	0	2	1.5	58.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030752	Kdm8	ENSMUST00000135129	ENSMUSP00000114890	TRANSLATION	protein_coding	stop	-	3	152	7	3.5	0	63.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030752	Kdm8	ENSMUST00000033010	ENSMUSP00000033010	TRANSLATION	protein_coding	-	CCDS21821.1	1	414	12	5.8	5.1	156.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045752	Tssc4	ENSMUST00000133410	ENSMUSP00000123499	TRANSLATION	protein_coding	stop	-	2	265	0	0	0	121.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045752	Tssc4	ENSMUST00000177841	ENSMUSP00000137399	TRANSLATION	protein_coding	-	CCDS40195.1	2	317	0	0	0.5	137.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045752	Tssc4	ENSMUST00000105920	ENSMUSP00000101540	TRANSLATION	protein_coding	-	CCDS40196.1	1	114	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045752	Tssc4	ENSMUST00000137856	ENSMUSP00000123353	TRANSLATION	protein_coding	stop	-	2	217	0	0	0	137.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045752	Tssc4	ENSMUST00000208779	ENSMUSP00000146914	TRANSLATION	protein_coding	-	CCDS40196.1	1	114	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045752	Tssc4	ENSMUST00000060433	ENSMUSP00000056582	TRANSLATION	protein_coding	-	CCDS40195.1	1	317	0	0	0.5	137.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045752	Tssc4	ENSMUST00000207776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045752	Tssc4	ENSMUST00000147995	ENSMUSP00000122335	TRANSLATION	protein_coding	stop	-	2	196	0	0	0	121.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093917	Vmn1r254	ENSMUST00000105187	ENSMUSP00000100822	TRANSLATION	protein_coding	-	CCDS71908.1	-	305	0	0	1.5	49.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000078762	Haus5	ENSMUST00000019697	ENSMUSP00000019697	TRANSLATION	protein_coding	-	CCDS52180.1	1	619	0	0	0.5	522.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078762	Haus5	ENSMUST00000126511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078762	Haus5	ENSMUST00000132982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078762	Haus5	ENSMUST00000142823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078762	Haus5	ENSMUST00000142741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078762	Haus5	ENSMUST00000132862	ENSMUSP00000121739	TRANSLATION	nonsense_mediated_decay	-	-	1	517	0	0	0	424.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000185406	ENSMUSP00000141040	TRANSLATION	protein_coding	stop	-	5	887	0	1.36	0	455.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000187789	ENSMUSP00000140349	TRANSLATION	protein_coding	start/stop	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000185823	ENSMUSP00000140855	TRANSLATION	protein_coding	start/stop	-	3	274	0	0	0	111.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000179227	ENSMUSP00000136692	TRANSLATION	protein_coding	start/stop	-	1	132	0	0	0	73.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000167366	ENSMUSP00000128250	TRANSLATION	protein_coding	start/stop	-	5	237	0	0	0	109.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000191587	ENSMUSP00000139657	TRANSLATION	protein_coding	start/stop	-	-	149	0	0	0	74.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025515	Muc2	ENSMUST00000026590	ENSMUSP00000026590	TRANSLATION	protein_coding	-	-	1	483	0	0.8	0	111.4	0	-4,-5	-	-	3.528	PRINCIPAL:1
ENSMUSG00000025515	Muc2	ENSMUST00000187945	ENSMUSP00000141128	TRANSLATION	protein_coding	start	-	1	923	0	0.8	0	232.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030929	Eri2	ENSMUST00000150844	ENSMUSP00000120547	TRANSLATION	protein_coding	-	CCDS40107.1	1	688	11	4.289	1.5	155.4	0	-4,0	-	-	17.4	PRINCIPAL:1
ENSMUSG00000030929	Eri2	ENSMUST00000063902	ENSMUSP00000068633	TRANSLATION	protein_coding	-	-	1	274	11	4.589	0	89.4	0	-4,0	-	-	14.04	MINOR
ENSMUSG00000030929	Eri2	ENSMUST00000106523	ENSMUSP00000102133	TRANSLATION	protein_coding	-	-	1	257	11	4.289	0	89.4	0	-4,0	-	-	13.44	MINOR
ENSMUSG00000030929	Eri2	ENSMUST00000125595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030929	Eri2	ENSMUST00000033224	ENSMUSP00000033224	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0.315	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000030929	Eri2	ENSMUST00000133926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030929	Eri2	ENSMUST00000139192	ENSMUSP00000117940	TRANSLATION	nonsense_mediated_decay	-	-	1	160	4	2.295	0	51.8	0	-3,1	-	-	-1	MINOR
ENSMUSG00000019734	Tmc4	ENSMUST00000144751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019734	Tmc4	ENSMUST00000145034	ENSMUSP00000146134	TRANSLATION	protein_coding	start	-	3	62	0	0	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000019734	Tmc4	ENSMUST00000121743	ENSMUSP00000112541	TRANSLATION	protein_coding	-	-	1	627	0	0	0	134.7	9	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000019734	Tmc4	ENSMUST00000148313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019734	Tmc4	ENSMUST00000130689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019734	Tmc4	ENSMUST00000136678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019734	Tmc4	ENSMUST00000038743	ENSMUSP00000043853	TRANSLATION	protein_coding	-	CCDS20723.1	1	694	0	0	0.5	134.7	9	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000061602	Vmn1r78	ENSMUST00000078039	ENSMUSP00000077186	TRANSLATION	protein_coding	-	CCDS20804.1	-	313	0	0	1.5	98	5	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000061602	Vmn1r78	ENSMUST00000228664	ENSMUSP00000154797	TRANSLATION	protein_coding	-	CCDS20804.1	-	313	0	0	1.5	98	5	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000061602	Vmn1r78	ENSMUST00000228244	ENSMUSP00000154016	TRANSLATION	protein_coding	-	CCDS20804.1	-	313	0	0	1.5	98	5	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000006307	Kmt2b	ENSMUST00000125836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006307	Kmt2b	ENSMUST00000006470	ENSMUSP00000006470	TRANSLATION	protein_coding	-	-	5	2721	43	10.58	0.5	369.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000006307	Kmt2b	ENSMUST00000131002	ENSMUSP00000118486	TRANSLATION	protein_coding	start	-	1	2014	43	10.58	0	369.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006307	Kmt2b	ENSMUST00000136959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006307	Kmt2b	ENSMUST00000125372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006307	Kmt2b	ENSMUST00000108154	ENSMUSP00000103789	TRANSLATION	protein_coding	-	CCDS21101.1	1	2713	43	10.58	0.5	369.4	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000006307	Kmt2b	ENSMUST00000128456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006307	Kmt2b	ENSMUST00000152931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030452	Nipa2	ENSMUST00000135849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030452	Nipa2	ENSMUST00000126604	ENSMUSP00000116219	TRANSLATION	protein_coding	stop	-	3	130	0	0	0	221	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000030452	Nipa2	ENSMUST00000152649	ENSMUSP00000120798	TRANSLATION	protein_coding	stop	-	5	127	0	0	0	180.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000030452	Nipa2	ENSMUST00000205773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030452	Nipa2	ENSMUST00000119041	ENSMUSP00000112394	TRANSLATION	protein_coding	-	CCDS21316.1	5	359	0	0	8.8	493.8	11	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030452	Nipa2	ENSMUST00000119201	ENSMUSP00000114020	TRANSLATION	protein_coding	-	CCDS21316.1	1	359	0	0	8.8	493.8	11	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030452	Nipa2	ENSMUST00000130239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030452	Nipa2	ENSMUST00000117812	ENSMUSP00000113727	TRANSLATION	protein_coding	-	CCDS21316.1	2	359	0	0	8.8	493.8	11	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030452	Nipa2	ENSMUST00000032635	ENSMUSP00000032635	TRANSLATION	protein_coding	-	CCDS21316.1	1	359	0	0	8.8	493.8	11	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000030452	Nipa2	ENSMUST00000147950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030452	Nipa2	ENSMUST00000143325	ENSMUSP00000119946	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062483	Vmn1r171	ENSMUST00000228674	ENSMUSP00000153866	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000078458	ENSMUSP00000077552	TRANSLATION	protein_coding	-	CCDS39822.1	-	316	0	0	0.5	65.2	8	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000228484	ENSMUSP00000154604	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000226128	ENSMUSP00000154091	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000228681	ENSMUSP00000153978	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000226771	ENSMUSP00000154651	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000227386	ENSMUSP00000153743	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000227774	ENSMUSP00000154330	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000226733	ENSMUSP00000154629	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000228559	ENSMUSP00000154453	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000226321	ENSMUSP00000154452	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000227866	ENSMUSP00000154230	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000062483	Vmn1r171	ENSMUST00000228228	ENSMUSP00000153858	TRANSLATION	protein_coding	-	-	-	304	0	0	1.5	65.2	8	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000051340	Olfr645	ENSMUST00000057104	ENSMUSP00000062821	TRANSLATION	protein_coding	-	CCDS21607.1	-	315	0	0.36	4.2	375.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000002981	Clptm1	ENSMUST00000208868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002981	Clptm1	ENSMUST00000208846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002981	Clptm1	ENSMUST00000208174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002981	Clptm1	ENSMUST00000208599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002981	Clptm1	ENSMUST00000055242	ENSMUSP00000051293	TRANSLATION	protein_coding	-	CCDS39800.1	1	664	0	0	1.5	491.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000002981	Clptm1	ENSMUST00000208594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002981	Clptm1	ENSMUST00000208215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002981	Clptm1	ENSMUST00000207704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002981	Clptm1	ENSMUST00000208554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089847	Timm10b	ENSMUST00000106780	ENSMUSP00000102392	TRANSLATION	protein_coding	-	CCDS21657.1	2	100	0	1.66	1.5	55.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000089847	Timm10b	ENSMUST00000209445	ENSMUSP00000147316	TRANSLATION	protein_coding	start	-	3	48	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000058333	ENSMUSP00000057061	TRANSLATION	protein_coding	-	CCDS21657.1	1	100	0	1.66	1.5	55.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000089847	Timm10b	ENSMUST00000209588	ENSMUSP00000147720	TRANSLATION	protein_coding	-	-	3	68	0	0.666	0	0	0	-4,-7	-	-	2.406	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000140577	ENSMUSP00000147612	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	1.06	0	33.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000106784	ENSMUSP00000102396	TRANSLATION	protein_coding	-	-	3	102	0	0.466	0	0	0	-4,-2	-	-	1.686	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000150479	ENSMUSP00000121793	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0.066	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000140385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089847	Timm10b	ENSMUST00000151193	ENSMUSP00000147436	TRANSLATION	protein_coding	-	-	2	51	0	1.06	0	33.2	0	-4,-7	-	-	7.398	MINOR
ENSMUSG00000089847	Timm10b	ENSMUST00000210350	ENSMUSP00000148071	TRANSLATION	protein_coding	-	-	2	99	0	1.66	0	55.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000089847	Timm10b	ENSMUST00000106783	ENSMUSP00000102395	TRANSLATION	protein_coding	-	CCDS21657.1	1	100	0	1.66	1.5	55.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000046223	Plaur	ENSMUST00000206935	ENSMUSP00000145540	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	1.2	0	25.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000046223	Plaur	ENSMUST00000206636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046223	Plaur	ENSMUST00000002284	ENSMUSP00000002284	TRANSLATION	protein_coding	-	CCDS20950.1	1	327	0	6	0.5	119.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046223	Plaur	ENSMUST00000206693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046223	Plaur	ENSMUST00000206514	ENSMUSP00000145632	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	3	0	57.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000046223	Plaur	ENSMUST00000205877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030683	Sez6l2	ENSMUST00000106332	ENSMUSP00000101939	TRANSLATION	protein_coding	-	CCDS57586.1	1	863	0	6.72	0.5	242.4	3	2,-1	-	-	12	MINOR
ENSMUSG00000030683	Sez6l2	ENSMUST00000155138	ENSMUSP00000146086	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0.76	0	0	3	2,-3	-	-	-1	MINOR
ENSMUSG00000030683	Sez6l2	ENSMUST00000106335	ENSMUSP00000101942	TRANSLATION	protein_coding	-	CCDS57585.1	1	910	0	6.42	5.1	242.4	3	2,-1	-	-	13.4	ALTERNATIVE:1
ENSMUSG00000030683	Sez6l2	ENSMUST00000125669	ENSMUSP00000145667	TRANSLATION	protein_coding	start	-	2	136	0	0.8	0	37.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000030683	Sez6l2	ENSMUST00000146017	ENSMUSP00000115905	TRANSLATION	protein_coding	stop	-	5	246	0	0	0	23.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000030683	Sez6l2	ENSMUST00000106333	ENSMUSP00000101940	TRANSLATION	protein_coding	-	CCDS40135.1	1	923	0	6.72	5.1	242.4	3	2,-1	-	-	14	PRINCIPAL:3
ENSMUSG00000030683	Sez6l2	ENSMUST00000134471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046591	Ticrr	ENSMUST00000206677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046591	Ticrr	ENSMUST00000035977	ENSMUSP00000041377	TRANSLATION	protein_coding	-	CCDS21384.1	1	1889	0	0	0.5	1190.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046591	Ticrr	ENSMUST00000206622	ENSMUSP00000146155	TRANSLATION	nonsense_mediated_decay	-	-	1	718	0	0	0	708	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046591	Ticrr	ENSMUST00000206072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046591	Ticrr	ENSMUST00000206591	ENSMUSP00000145735	TRANSLATION	nonsense_mediated_decay	-	-	1	968	0	0	0	1096.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046591	Ticrr	ENSMUST00000205750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046591	Ticrr	ENSMUST00000206017	ENSMUSP00000146221	TRANSLATION	nonsense_mediated_decay	-	-	2	409	0	0	0	223.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030666	Calcb	ENSMUST00000182816	ENSMUSP00000138713	TRANSLATION	protein_coding	-	-	5	156	0	0.8	0	148.5	0	4,-1	-	-	11.76	MINOR
ENSMUSG00000030666	Calcb	ENSMUST00000032902	ENSMUSP00000032902	TRANSLATION	protein_coding	-	CCDS21764.1	1	130	0	0.8	1.7	152.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000030666	Calcb	ENSMUST00000182044	ENSMUSP00000138590	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	42	0	4,-1	-	-	-1	MINOR
ENSMUSG00000030816	Rnf40	ENSMUST00000206724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030816	Rnf40	ENSMUST00000033088	ENSMUSP00000033088	TRANSLATION	protein_coding	-	-	5	961	8	1.6	0	28	0	-4,-5	-	-	18	MINOR
ENSMUSG00000030816	Rnf40	ENSMUST00000206699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030816	Rnf40	ENSMUST00000206914	ENSMUSP00000146004	TRANSLATION	protein_coding	-	-	5	901	8	1.6	1.2	28	0	-4,-5	-	-	18.093	MINOR
ENSMUSG00000030816	Rnf40	ENSMUST00000205694	ENSMUSP00000146310	TRANSLATION	protein_coding	-	CCDS21871.1	1	1001	8	1.6	7.5	28	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030816	Rnf40	ENSMUST00000206443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023159	Psg29	ENSMUST00000075934	ENSMUSP00000075320	TRANSLATION	protein_coding	-	CCDS20862.1	1	468	0	3	0.5	142.6	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000486	Septin1	ENSMUST00000142356	ENSMUSP00000114468	TRANSLATION	protein_coding	stop	-	5	186	14	4.75	0	262.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000486	Septin1	ENSMUST00000152267	ENSMUSP00000146307	TRANSLATION	protein_coding	stop	-	5	328	13	7.6	0	242.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000486	Septin1	ENSMUST00000133913	ENSMUSP00000145906	TRANSLATION	protein_coding	stop	-	3	145	10	3.5	0	218.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000486	Septin1	ENSMUST00000133733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000486	Septin1	ENSMUST00000131208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000486	Septin1	ENSMUST00000133591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000486	Septin1	ENSMUST00000106314	ENSMUSP00000101921	TRANSLATION	protein_coding	-	CCDS40141.1	1	366	16	8.35	3.9	406.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000000486	Septin1	ENSMUST00000205570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000486	Septin1	ENSMUST00000106313	ENSMUSP00000101920	TRANSLATION	protein_coding	-	-	5	338	16	7.6	1.5	392.8	0	-4,-5	-	-	15.874	MINOR
ENSMUSG00000000486	Septin1	ENSMUST00000138541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050866	Clrn3	ENSMUST00000053716	ENSMUSP00000056245	TRANSLATION	protein_coding	-	CCDS21943.1	1	226	0	0	6.3	0	0	-1,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000030549	Rhcg	ENSMUST00000161084	ENSMUSP00000134005	TRANSLATION	protein_coding	stop	-	2	60	0	1.5	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000030549	Rhcg	ENSMUST00000172788	ENSMUSP00000134230	TRANSLATION	protein_coding	start	-	5	41	0	0.6	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000030549	Rhcg	ENSMUST00000032766	ENSMUSP00000032766	TRANSLATION	protein_coding	-	CCDS21383.1	1	498	5	10.93	1.5	266.1	8	-1,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000030954	Gp2	ENSMUST00000239424	ENSMUSP00000159355	TRANSLATION	protein_coding	-	CCDS21779.1	-	534	0	5.44	1.5	176.6	1	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000030954	Gp2	ENSMUST00000033255	ENSMUSP00000033255	TRANSLATION	protein_coding	-	-	1	531	0	5.44	1.5	176.6	1	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000030954	Gp2	ENSMUST00000207887	ENSMUSP00000146487	TRANSLATION	protein_coding	-	-	1	553	0	4.6	0	172.5	0	1,-2	-	-	10.074	MINOR
ENSMUSG00000073932	Olfr641	ENSMUST00000213214	ENSMUSP00000149866	TRANSLATION	protein_coding	-	CCDS21603.1	5	312	0	0.3	7.6	393	4	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073932	Olfr641	ENSMUST00000098183	ENSMUSP00000095785	TRANSLATION	protein_coding	-	CCDS21603.1	-	312	0	0.3	7.6	393	4	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000073932	Olfr641	ENSMUST00000213904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061028	Clasrp	ENSMUST00000208464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000086041	ENSMUSP00000083205	TRANSLATION	protein_coding	-	CCDS52061.1	1	668	0	0	1.5	149.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061028	Clasrp	ENSMUST00000208716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000208427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000207325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000207907	ENSMUSP00000146982	TRANSLATION	nonsense_mediated_decay	-	-	1	627	0	0	0	149.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061028	Clasrp	ENSMUST00000207253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000207663	ENSMUSP00000147069	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061028	Clasrp	ENSMUST00000208068	ENSMUSP00000147103	TRANSLATION	nonsense_mediated_decay	-	-	1	588	0	0	0	149.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061028	Clasrp	ENSMUST00000209059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000207447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061028	Clasrp	ENSMUST00000207524	ENSMUSP00000146794	TRANSLATION	nonsense_mediated_decay	-	-	5	207	0	0	0	149.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061028	Clasrp	ENSMUST00000207264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030411	Nova2	ENSMUST00000032571	ENSMUSP00000032571	TRANSLATION	protein_coding	-	-	5	556	0	2.6	0	157.9	0	-2,-5	-	-	12	MINOR
ENSMUSG00000030411	Nova2	ENSMUST00000220302	ENSMUSP00000151939	TRANSLATION	protein_coding	-	CCDS20882.2	5	492	0	2.6	5.3	157.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053801	Grwd1	ENSMUST00000131384	ENSMUSP00000116252	TRANSLATION	protein_coding	-	CCDS21266.2	1	446	0	3.104	5.3	112.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053801	Grwd1	ENSMUST00000211265	ENSMUSP00000147629	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0	0	26	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053801	Grwd1	ENSMUST00000107723	ENSMUSP00000103351	TRANSLATION	protein_coding	-	CCDS21266.2	1	446	0	3.104	5.3	112.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053801	Grwd1	ENSMUST00000209484	ENSMUSP00000148100	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048312	Gm4884	ENSMUST00000164422	ENSMUSP00000133059	TRANSLATION	protein_coding	-	CCDS52208.1	2	694	0	0	0.5	195.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078621	Hbb-bh2	ENSMUST00000106866	ENSMUSP00000102479	TRANSLATION	protein_coding	-	CCDS52340.1	1	147	21	3	9.1	83.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000030842	Lamtor1	ENSMUST00000193465	ENSMUSP00000141774	TRANSLATION	protein_coding	-	-	5	142	0	0	0	73.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000030842	Lamtor1	ENSMUST00000033131	ENSMUSP00000033131	TRANSLATION	protein_coding	-	CCDS21519.1	1	161	0	0	10.8	73.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000030842	Lamtor1	ENSMUST00000211180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033917	Gde1	ENSMUST00000208040	ENSMUSP00000147251	TRANSLATION	nonsense_mediated_decay	-	-	3	108	2	0.4	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000033917	Gde1	ENSMUST00000207323	ENSMUSP00000147236	TRANSLATION	protein_coding	stop	-	3	107	2	0.4	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000033917	Gde1	ENSMUST00000038791	ENSMUSP00000046371	TRANSLATION	protein_coding	-	CCDS21774.1	1	331	6	3.55	7.5	115.9	0	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033917	Gde1	ENSMUST00000132509	ENSMUSP00000122015	TRANSLATION	protein_coding	stop	-	5	186	0	2.2	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060888	Olfr566	ENSMUST00000213481	ENSMUSP00000148998	TRANSLATION	protein_coding	-	-	3	319	0	0.36	5.1	368	8	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000060888	Olfr566	ENSMUST00000071393	ENSMUSP00000071344	TRANSLATION	protein_coding	-	CCDS21548.1	-	316	0	0.36	3.9	368	8	-4,-7	-	-	13.414	PRINCIPAL:2
ENSMUSG00000060888	Olfr566	ENSMUST00000209952	ENSMUSP00000148058	TRANSLATION	protein_coding	-	-	3	319	0	0.36	5.1	368	8	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000058638	Zfp110	ENSMUST00000137718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058638	Zfp110	ENSMUST00000154011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058638	Zfp110	ENSMUST00000004614	ENSMUSP00000004614	TRANSLATION	protein_coding	-	CCDS20814.1	1	832	20	1.4	0.5	343.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058638	Zfp110	ENSMUST00000148041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058638	Zfp110	ENSMUST00000168247	ENSMUSP00000132060	TRANSLATION	protein_coding	-	CCDS20814.1	5	832	20	1.4	0.5	343.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000178946	ENSMUSP00000136616	TRANSLATION	protein_coding	-	CCDS21495.1	1	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000170954	ENSMUSP00000130019	TRANSLATION	protein_coding	-	CCDS21495.1	1	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000208260	ENSMUSP00000147047	TRANSLATION	protein_coding	-	CCDS21495.1	3	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000207995	ENSMUSP00000147151	TRANSLATION	protein_coding	-	CCDS21495.1	2	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000179842	ENSMUSP00000136415	TRANSLATION	protein_coding	-	CCDS21495.1	1	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000208555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035165	Kcne3	ENSMUST00000049333	ENSMUSP00000039353	TRANSLATION	protein_coding	-	CCDS21495.1	1	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035165	Kcne3	ENSMUST00000207358	ENSMUSP00000146583	TRANSLATION	protein_coding	-	CCDS21495.1	5	103	0	1	5.3	31.2	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000109392	Gm5737	ENSMUST00000208668	ENSMUSP00000146629	TRANSLATION	protein_coding	-	-	5	423	29	5.745	0	215.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073998	Olfr520	ENSMUST00000220185	ENSMUSP00000151459	TRANSLATION	protein_coding	-	CCDS21486.1	5	316	0	0.36	2.7	198.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073998	Olfr520	ENSMUST00000098264	ENSMUSP00000095864	TRANSLATION	protein_coding	-	CCDS21486.1	-	316	0	0.36	2.7	198.5	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066586	Scgb2b26	ENSMUST00000085623	ENSMUSP00000082763	TRANSLATION	protein_coding	-	CCDS21133.1	1	112	0	1.1	0.5	92.8	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000073961	Olfr582	ENSMUST00000098212	ENSMUSP00000095813	TRANSLATION	protein_coding	-	CCDS21558.1	-	319	0	0	0.5	363.7	9	-4,-7	-	-	6	MINOR
ENSMUSG00000073961	Olfr582	ENSMUST00000214021	ENSMUSP00000149453	TRANSLATION	protein_coding	-	-	5	314	0	0	7.6	363.7	9	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000073961	Olfr582	ENSMUST00000210119	ENSMUSP00000147470	TRANSLATION	protein_coding	-	-	5	314	0	0	7.6	363.7	9	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000073961	Olfr582	ENSMUST00000211036	ENSMUSP00000147453	TRANSLATION	protein_coding	-	-	5	314	0	0	7.6	363.7	9	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000059119	Nap1l4	ENSMUST00000208190	ENSMUSP00000147130	TRANSLATION	protein_coding	-	CCDS85479.1	1	386	0	6.581	6.3	343.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000059119	Nap1l4	ENSMUST00000207948	ENSMUSP00000146710	TRANSLATION	protein_coding	stop	-	2	58	0	1	0	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059119	Nap1l4	ENSMUST00000208317	ENSMUSP00000147149	TRANSLATION	protein_coding	start/stop	-	3	219	0	4.473	0	275.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059119	Nap1l4	ENSMUST00000208093	ENSMUSP00000147062	TRANSLATION	protein_coding	stop	-	3	75	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059119	Nap1l4	ENSMUST00000209098	ENSMUSP00000146474	TRANSLATION	protein_coding	-	CCDS85479.1	1	386	0	6.581	6.3	343.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000059119	Nap1l4	ENSMUST00000207870	ENSMUSP00000146639	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059119	Nap1l4	ENSMUST00000072727	ENSMUSP00000072510	TRANSLATION	protein_coding	-	CCDS40197.1	1	375	0	6.581	6.3	343.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000059119	Nap1l4	ENSMUST00000207244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059119	Nap1l4	ENSMUST00000208282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043843	Tmem145	ENSMUST00000108409	ENSMUSP00000104046	TRANSLATION	protein_coding	-	CCDS39837.1	2	563	0	0	2.7	259.4	11	3,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000043843	Tmem145	ENSMUST00000119703	ENSMUSP00000112676	TRANSLATION	protein_coding	-	-	5	493	0	0	0	259.4	11	3,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000043843	Tmem145	ENSMUST00000140016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043843	Tmem145	ENSMUST00000205639	ENSMUSP00000159059	TRANSLATION	protein_coding	-	-	-	604	0	0	0.5	259.4	11	3,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000030677	Kif22	ENSMUST00000205754	ENSMUSP00000145752	TRANSLATION	protein_coding	start	-	3	151	0	2.25	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030677	Kif22	ENSMUST00000206924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030677	Kif22	ENSMUST00000206655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030677	Kif22	ENSMUST00000205806	ENSMUSP00000145987	TRANSLATION	protein_coding	stop	-	3	161	7	4	0	130.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030677	Kif22	ENSMUST00000206412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030677	Kif22	ENSMUST00000032915	ENSMUSP00000032915	TRANSLATION	protein_coding	-	CCDS21855.1	1	660	11	11.25	1.5	361.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025508	Rplp2	ENSMUST00000137307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025508	Rplp2	ENSMUST00000106004	ENSMUSP00000101626	TRANSLATION	protein_coding	-	CCDS40187.1	2	115	0	3.25	15.7	90.3	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025508	Rplp2	ENSMUST00000106003	ENSMUSP00000101625	TRANSLATION	protein_coding	-	CCDS40187.1	2	115	0	3.25	15.7	90.3	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025508	Rplp2	ENSMUST00000084434	ENSMUSP00000081474	TRANSLATION	protein_coding	-	CCDS40187.1	1	115	0	3.25	15.7	90.3	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025508	Rplp2	ENSMUST00000134636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025508	Rplp2	ENSMUST00000140099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034583	Olfr1347	ENSMUST00000209055	ENSMUSP00000146605	TRANSLATION	protein_coding	stop	-	3	117	0	0.48	0	50.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000034583	Olfr1347	ENSMUST00000207339	ENSMUSP00000147141	TRANSLATION	protein_coding	-	-	2	312	0	0.48	5.1	170	8	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000034583	Olfr1347	ENSMUST00000220413	ENSMUSP00000152024	TRANSLATION	protein_coding	-	CCDS20779.1	-	319	0	0.48	0.5	170	8	-4,-7	-	-	12	MINOR
ENSMUSG00000034583	Olfr1347	ENSMUST00000218572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034583	Olfr1347	ENSMUST00000036357	ENSMUSP00000046590	TRANSLATION	protein_coding	-	-	-	312	0	0.48	5.1	170	8	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000106607	ENSMUSP00000102218	TRANSLATION	protein_coding	-	-	1	94	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000205450	ENSMUSP00000146007	TRANSLATION	protein_coding	stop	-	5	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000106608	ENSMUSP00000102219	TRANSLATION	protein_coding	-	-	3	137	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000205427	ENSMUSP00000145989	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000032899	ENSMUSP00000032899	TRANSLATION	protein_coding	-	CCDS21766.1	1	181	0	0	5.2	46.7	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000030663	1110004F10Rik	ENSMUST00000151254	ENSMUSP00000116035	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043308	Vmn1r75	ENSMUST00000228646	ENSMUSP00000154156	TRANSLATION	protein_coding	-	-	-	263	0	0	0	97.8	6	-4,-7	-	-	6	MINOR
ENSMUSG00000043308	Vmn1r75	ENSMUST00000057229	ENSMUSP00000051510	TRANSLATION	protein_coding	-	CCDS20802.1	-	305	0	0	1.5	97.8	7	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043308	Vmn1r75	ENSMUST00000226855	ENSMUSP00000154144	TRANSLATION	protein_coding	-	CCDS20802.1	-	305	0	0	1.5	97.8	7	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043308	Vmn1r75	ENSMUST00000228463	ENSMUSP00000154577	TRANSLATION	protein_coding	-	CCDS20802.1	-	305	0	0	1.5	97.8	7	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043308	Vmn1r75	ENSMUST00000228268	ENSMUSP00000154800	TRANSLATION	protein_coding	-	-	-	263	0	0	0	97.8	6	-4,-7	-	-	6	MINOR
ENSMUSG00000043308	Vmn1r75	ENSMUST00000226622	ENSMUSP00000154540	TRANSLATION	protein_coding	-	CCDS20802.1	-	305	0	0	1.5	97.8	7	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043308	Vmn1r75	ENSMUST00000227611	ENSMUSP00000154079	TRANSLATION	protein_coding	-	-	-	263	0	0	0	97.8	6	-4,-7	-	-	6	MINOR
ENSMUSG00000025133	Ints4	ENSMUST00000205876	ENSMUSP00000146158	TRANSLATION	nonsense_mediated_decay	start	-	2	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025133	Ints4	ENSMUST00000205706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025133	Ints4	ENSMUST00000206843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025133	Ints4	ENSMUST00000206644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025133	Ints4	ENSMUST00000026126	ENSMUSP00000026126	TRANSLATION	protein_coding	-	CCDS21460.1	1	964	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000025133	Ints4	ENSMUST00000205481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025133	Ints4	ENSMUST00000205387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042659	Arrdc4	ENSMUST00000118110	ENSMUSP00000112962	TRANSLATION	protein_coding	-	CCDS52272.1	1	296	0	4.23	0.5	167.9	0	-4,-5	-	-	9.708	MINOR
ENSMUSG00000042659	Arrdc4	ENSMUST00000048068	ENSMUSP00000044578	TRANSLATION	protein_coding	-	CCDS39985.1	1	415	0	4.87	1.5	184.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078681	Tm2d3	ENSMUST00000129166	ENSMUSP00000146099	TRANSLATION	protein_coding	stop	-	2	184	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000206837	ENSMUSP00000146014	TRANSLATION	protein_coding	start/stop	-	3	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000206628	ENSMUSP00000146320	TRANSLATION	protein_coding	start/stop	-	5	153	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000065574	ENSMUSP00000064967	TRANSLATION	protein_coding	-	CCDS21341.1	1	261	0	0	1.5	53.6	1	-4,-7	-	-	6.192	PRINCIPAL:4
ENSMUSG00000078681	Tm2d3	ENSMUST00000206517	ENSMUSP00000145534	TRANSLATION	protein_coding	-	-	5	252	0	0	3.6	53.6	1	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000078681	Tm2d3	ENSMUST00000206934	ENSMUSP00000145545	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000107495	ENSMUSP00000103119	TRANSLATION	protein_coding	-	CCDS21341.1	5	261	0	0	1.5	53.6	1	-4,-7	-	-	6.192	ALTERNATIVE:2
ENSMUSG00000078681	Tm2d3	ENSMUST00000206361	ENSMUSP00000145994	TRANSLATION	protein_coding	start/stop	-	5	145	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000143508	ENSMUSP00000116848	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000078681	Tm2d3	ENSMUST00000032726	ENSMUSP00000032726	TRANSLATION	protein_coding	-	CCDS21340.1	1	230	0	0	0.5	53.6	1	-3,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000011263	Exoc3l2	ENSMUST00000137613	ENSMUSP00000123025	TRANSLATION	protein_coding	-	-	5	789	0	4.904	0.5	182.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000011263	Exoc3l2	ENSMUST00000011407	ENSMUSP00000011407	TRANSLATION	protein_coding	-	-	5	242	0	0.798	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000073899	Olfr1532-ps1	ENSMUST00000098140	ENSMUSP00000095744	TRANSLATION	protein_coding	-	CCDS21679.1	-	307	0	0.4	5.1	195.8	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073899	Olfr1532-ps1	ENSMUST00000207492	ENSMUSP00000146909	TRANSLATION	protein_coding	-	CCDS21679.1	2	307	0	0.4	5.1	195.8	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073899	Olfr1532-ps1	ENSMUST00000215949	ENSMUSP00000149624	TRANSLATION	protein_coding	-	CCDS21679.1	5	307	0	0.4	5.1	195.8	6	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000037032	Apbb1	ENSMUST00000189072	ENSMUSP00000139575	TRANSLATION	protein_coding	-	CCDS80773.1	5	451	0	8.16	5.1	160	0	-4,-5	-	-	10.788	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000191250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037032	Apbb1	ENSMUST00000210079	ENSMUSP00000147947	TRANSLATION	protein_coding	stop	-	5	122	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000186814	ENSMUSP00000147397	TRANSLATION	nonsense_mediated_decay	start	-	5	131	0	2.33	0	75.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000187721	ENSMUSP00000140192	TRANSLATION	protein_coding	stop	-	2	260	0	3.83	0	100.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000188726	ENSMUSP00000140822	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000186868	ENSMUSP00000140052	TRANSLATION	protein_coding	stop	-	5	105	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000189378	ENSMUSP00000140979	TRANSLATION	protein_coding	-	CCDS80775.1	1	708	0	8.66	6.3	184.4	0	-4,-7	-	-	13.706	PRINCIPAL:3
ENSMUSG00000037032	Apbb1	ENSMUST00000081165	ENSMUSP00000079932	TRANSLATION	protein_coding	-	-	5	710	0	8.66	6.3	186.6	0	-4,-7	-	-	13.838	ALTERNATIVE:1
ENSMUSG00000037032	Apbb1	ENSMUST00000187683	ENSMUSP00000139426	TRANSLATION	protein_coding	stop	-	3	158	0	2.33	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000191601	ENSMUSP00000140116	TRANSLATION	protein_coding	-	CCDS80776.1	5	710	0	8.66	6.3	188.3	0	-4,-7	-	-	13.94	ALTERNATIVE:1
ENSMUSG00000037032	Apbb1	ENSMUST00000190961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037032	Apbb1	ENSMUST00000187051	ENSMUSP00000139755	TRANSLATION	protein_coding	stop	-	3	120	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000188368	ENSMUSP00000139788	TRANSLATION	protein_coding	-	-	5	487	0	8.66	5.2	189.3	0	-4,-6	-	-	13.584	ALTERNATIVE:1
ENSMUSG00000037032	Apbb1	ENSMUST00000189265	ENSMUSP00000140137	TRANSLATION	protein_coding	-	-	5	235	0	4.33	0	59.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000190369	ENSMUSP00000140486	TRANSLATION	protein_coding	-	CCDS80773.1	5	451	0	8.16	5.1	160	0	-4,-5	-	-	10.788	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000188440	ENSMUSP00000140715	TRANSLATION	protein_coding	stop	-	5	223	0	4.16	0	102.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000211614	ENSMUSP00000148234	TRANSLATION	protein_coding	start	-	3	230	0	3.5	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037032	Apbb1	ENSMUST00000191011	ENSMUSP00000140973	TRANSLATION	protein_coding	-	CCDS80775.1	1	708	0	8.66	6.3	184.4	0	-4,-7	-	-	13.706	PRINCIPAL:3
ENSMUSG00000037032	Apbb1	ENSMUST00000187057	ENSMUSP00000139899	TRANSLATION	protein_coding	-	CCDS80774.1	5	485	0	8.66	5.2	185.4	0	-4,-6	-	-	13.35	ALTERNATIVE:1
ENSMUSG00000037032	Apbb1	ENSMUST00000188001	ENSMUSP00000147609	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038260	Trpm4	ENSMUST00000209239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038260	Trpm4	ENSMUST00000210541	ENSMUSP00000147635	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038260	Trpm4	ENSMUST00000210311	ENSMUSP00000148245	TRANSLATION	protein_coding	start	-	3	128	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038260	Trpm4	ENSMUST00000209506	ENSMUSP00000147999	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000038260	Trpm4	ENSMUST00000211743	ENSMUSP00000147793	TRANSLATION	protein_coding	-	-	1	1066	0	0	0.5	46.1	6	-3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000038260	Trpm4	ENSMUST00000211411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038260	Trpm4	ENSMUST00000042194	ENSMUSP00000040367	TRANSLATION	protein_coding	-	CCDS52245.1	1	1213	0	0	0.5	46.1	6	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038260	Trpm4	ENSMUST00000211431	ENSMUSP00000147620	TRANSLATION	nonsense_mediated_decay	-	-	2	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038260	Trpm4	ENSMUST00000210639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091638	Vmn1r113	ENSMUST00000173723	ENSMUSP00000133307	TRANSLATION	protein_coding	-	CCDS59709.1	-	307	0	0	1.5	56.9	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091638	Vmn1r113	ENSMUST00000168794	ENSMUSP00000126041	TRANSLATION	protein_coding	-	-	5	297	0	0	0.5	27.6	5	-4,-5	-	-	2.91	MINOR
ENSMUSG00000109305	Smim38	ENSMUST00000207841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109305	Smim38	ENSMUST00000208264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109305	Smim38	ENSMUST00000208788	ENSMUSP00000149353	TRANSLATION	protein_coding	-	-	1	51	0	0	0	0	0	2,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000109305	Smim38	ENSMUST00000207703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036892	Prodh2	ENSMUST00000142575	ENSMUSP00000114778	TRANSLATION	protein_coding	stop	-	5	284	5	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036892	Prodh2	ENSMUST00000142514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036892	Prodh2	ENSMUST00000122876	ENSMUSP00000114278	TRANSLATION	protein_coding	start	-	5	139	7	1.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036892	Prodh2	ENSMUST00000131789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036892	Prodh2	ENSMUST00000130839	ENSMUSP00000117480	TRANSLATION	nonsense_mediated_decay	-	-	5	142	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036892	Prodh2	ENSMUST00000058280	ENSMUSP00000062214	TRANSLATION	protein_coding	-	CCDS21093.1	1	456	27	2.262	1.5	0	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036892	Prodh2	ENSMUST00000133318	ENSMUSP00000122546	TRANSLATION	protein_coding	stop	-	5	246	2	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036892	Prodh2	ENSMUST00000131040	ENSMUSP00000116662	TRANSLATION	protein_coding	start/stop	-	5	260	12	0.45	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000092367	Gm20479	ENSMUST00000126587	ENSMUSP00000122630	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000059263	Usp47	ENSMUST00000215510	ENSMUSP00000151051	TRANSLATION	protein_coding	-	-	5	1376	8	7.27	1.5	177	0	-4,-5	-	-	18.135	MINOR
ENSMUSG00000059263	Usp47	ENSMUST00000210526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059263	Usp47	ENSMUST00000211791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059263	Usp47	ENSMUST00000106653	ENSMUSP00000102264	TRANSLATION	protein_coding	-	CCDS40089.1	5	1356	8	6.82	11.6	177.1	0	-4,-5	-	-	20.1	PRINCIPAL:3
ENSMUSG00000059263	Usp47	ENSMUST00000210591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059263	Usp47	ENSMUST00000210309	ENSMUSP00000147619	TRANSLATION	protein_coding	-	CCDS85384.1	1	1376	8	6.82	11.6	177.1	0	-4,-5	-	-	20.1	ALTERNATIVE:1
ENSMUSG00000044899	Olfr649	ENSMUST00000106859	ENSMUSP00000102472	TRANSLATION	protein_coding	-	CCDS21614.1	3	312	0	0.42	6.4	369.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044899	Olfr649	ENSMUST00000060440	ENSMUSP00000050903	TRANSLATION	protein_coding	-	CCDS21614.1	-	312	0	0.42	6.4	369.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073978	Olfr548-ps1	ENSMUST00000098228	ENSMUSP00000147042	TRANSLATION	protein_coding	stop	-	-	311	0	0.2	7.6	345.6	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000073978	Olfr548-ps1	ENSMUST00000210064	ENSMUSP00000147923	TRANSLATION	protein_coding	-	-	5	314	0	0.2	7.6	346.7	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000095962	Vmn1r137	ENSMUST00000177884	ENSMUSP00000135997	TRANSLATION	protein_coding	-	CCDS52104.1	-	307	0	0	1.5	55.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025491	Ifitm1	ENSMUST00000106040	ENSMUSP00000101655	TRANSLATION	protein_coding	-	CCDS21995.1	3	106	0	0	1.5	97.2	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025491	Ifitm1	ENSMUST00000026564	ENSMUSP00000026564	TRANSLATION	protein_coding	-	CCDS21995.1	1	106	0	0	1.5	97.2	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025491	Ifitm1	ENSMUST00000106042	ENSMUSP00000101657	TRANSLATION	protein_coding	-	CCDS21995.1	1	106	0	0	1.5	97.2	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000054938	Olfr1346	ENSMUST00000215302	ENSMUSP00000150503	TRANSLATION	protein_coding	-	CCDS20778.1	5	313	0	0.28	1.5	148.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054938	Olfr1346	ENSMUST00000207658	ENSMUSP00000146519	TRANSLATION	protein_coding	-	CCDS20778.1	2	313	0	0.28	1.5	148.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054938	Olfr1346	ENSMUST00000056144	ENSMUSP00000050553	TRANSLATION	protein_coding	-	CCDS20778.1	-	313	0	0.28	1.5	148.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096714	Olfr699	ENSMUST00000215952	ENSMUSP00000150923	TRANSLATION	protein_coding	-	CCDS21670.1	5	316	0	0.36	7.5	157.7	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096714	Olfr699	ENSMUST00000065024	ENSMUSP00000068023	TRANSLATION	protein_coding	-	CCDS21670.1	-	316	0	0.36	7.5	157.7	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096714	Olfr699	ENSMUST00000216307	ENSMUSP00000149112	TRANSLATION	protein_coding	-	CCDS21670.1	5	316	0	0.36	7.5	157.7	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043017	Ptgir	ENSMUST00000144408	ENSMUSP00000122080	TRANSLATION	protein_coding	-	CCDS20857.2	1	415	0	0	1.5	75.5	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043017	Ptgir	ENSMUST00000086101	ENSMUSP00000083270	TRANSLATION	protein_coding	-	-	1	212	0	0	0.5	0	2	-4,-6	-	-	0	MINOR
ENSMUSG00000074261	Erich4	ENSMUST00000238895	ENSMUSP00000158893	TRANSLATION	protein_coding	-	CCDS20987.1	-	140	0	0	0.5	187.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000074261	Erich4	ENSMUST00000098663	ENSMUSP00000096260	TRANSLATION	protein_coding	-	-	1	136	0	0	0	187.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000015709	Arnt2	ENSMUST00000085077	ENSMUSP00000082154	TRANSLATION	protein_coding	-	CCDS59733.1	1	712	0	10.38	3.9	175.5	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000015709	Arnt2	ENSMUST00000208863	ENSMUSP00000146868	TRANSLATION	protein_coding	stop	-	3	93	0	1.3	0	38.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000208936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015709	Arnt2	ENSMUST00000207459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015709	Arnt2	ENSMUST00000208129	ENSMUSP00000146614	TRANSLATION	nonsense_mediated_decay	start	-	3	160	0	4.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000209133	ENSMUSP00000147129	TRANSLATION	protein_coding	-	-	5	701	0	10.38	1.5	175.5	0	-4,-6	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000015709	Arnt2	ENSMUST00000208232	ENSMUSP00000146413	TRANSLATION	protein_coding	-	-	1	701	0	10.38	1.5	175.5	0	-4,-6	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000015709	Arnt2	ENSMUST00000208995	ENSMUSP00000146599	TRANSLATION	protein_coding	stop	-	5	206	0	4.63	0	98.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000208564	ENSMUSP00000146989	TRANSLATION	nonsense_mediated_decay	start	-	3	123	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000207769	ENSMUSP00000146414	TRANSLATION	protein_coding	stop	-	3	167	0	3.3	0	51.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000208204	ENSMUSP00000146781	TRANSLATION	nonsense_mediated_decay	start	-	5	52	1	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015709	Arnt2	ENSMUST00000207759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015709	Arnt2	ENSMUST00000208392	ENSMUSP00000146776	TRANSLATION	protein_coding	stop	-	3	91	0	1.3	0	35.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096029	Olfr679	ENSMUST00000214328	ENSMUSP00000150668	TRANSLATION	protein_coding	-	CCDS21640.1	5	315	0	0.42	8.8	246.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096029	Olfr679	ENSMUST00000214738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096029	Olfr679	ENSMUST00000098158	ENSMUSP00000095761	TRANSLATION	protein_coding	-	CCDS21640.1	-	315	0	0.42	8.8	246.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096029	Olfr679	ENSMUST00000215704	ENSMUSP00000149116	TRANSLATION	protein_coding	-	CCDS21640.1	5	315	0	0.42	8.8	246.4	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000109631	Olfr494	ENSMUST00000210291	ENSMUSP00000147830	TRANSLATION	protein_coding	-	CCDS21713.1	-	314	0	0.2	2.7	187.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109631	Olfr494	ENSMUST00000209743	ENSMUSP00000148063	TRANSLATION	protein_coding	-	CCDS21713.1	3	314	0	0.2	2.7	187.1	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000216	Scnn1g	ENSMUST00000000221	ENSMUSP00000000221	TRANSLATION	protein_coding	-	CCDS21803.1	1	655	0	3.17	0.5	351.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033585	Ndn	ENSMUST00000038775	ENSMUSP00000045369	TRANSLATION	protein_coding	-	CCDS21326.1	-	325	0	0.6	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000030946	Lhpp	ENSMUST00000033241	ENSMUSP00000033241	TRANSLATION	protein_coding	-	CCDS21925.1	1	270	11	6.75	7.5	117.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000030946	Lhpp	ENSMUST00000106170	ENSMUSP00000147970	TRANSLATION	protein_coding	-	-	1	242	11	5.75	1.2	101.6	0	-4,-7	-	-	15.135	MINOR
ENSMUSG00000030946	Lhpp	ENSMUST00000130672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030946	Lhpp	ENSMUST00000148669	ENSMUSP00000147404	TRANSLATION	nonsense_mediated_decay	-	-	3	42	4	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030946	Lhpp	ENSMUST00000209903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030946	Lhpp	ENSMUST00000210168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030946	Lhpp	ENSMUST00000133969	ENSMUSP00000147386	TRANSLATION	nonsense_mediated_decay	start	-	5	47	4	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094305	Scgb2b20	ENSMUST00000179248	ENSMUSP00000137484	TRANSLATION	protein_coding	-	CCDS21131.1	1	112	0	1.25	0.5	102	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039062	Anpep	ENSMUST00000206682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039062	Anpep	ENSMUST00000205502	ENSMUSP00000145682	TRANSLATION	protein_coding	stop	-	3	207	0	4.75	0	173.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039062	Anpep	ENSMUST00000149164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039062	Anpep	ENSMUST00000107392	ENSMUSP00000103015	TRANSLATION	protein_coding	-	CCDS21388.1	1	966	12	19	1.5	584.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039062	Anpep	ENSMUST00000049004	ENSMUSP00000035943	TRANSLATION	protein_coding	-	CCDS21388.1	1	966	12	19	1.5	584.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039062	Anpep	ENSMUST00000206235	ENSMUSP00000146085	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000056885	Gm4559	ENSMUST00000080669	ENSMUSP00000079498	TRANSLATION	protein_coding	-	CCDS57596.1	-	199	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000091435	Vmn1r115	ENSMUST00000169374	ENSMUSP00000128692	TRANSLATION	protein_coding	-	CCDS52083.1	-	295	0	0	0.5	51.3	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000073786	Gm7579	ENSMUST00000097943	ENSMUSP00000147547	TRANSLATION	protein_coding	-	CCDS85465.1	-	243	0	0	0.5	39	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048677	Tpcn2	ENSMUST00000209047	ENSMUSP00000147224	TRANSLATION	nonsense_mediated_decay	-	-	1	479	0	5.455	0	81	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000048677	Tpcn2	ENSMUST00000208867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048677	Tpcn2	ENSMUST00000058022	ENSMUSP00000061308	TRANSLATION	protein_coding	-	CCDS40203.1	1	731	0	9.515	0.5	176.2	14	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048677	Tpcn2	ENSMUST00000208328	ENSMUSP00000147178	TRANSLATION	nonsense_mediated_decay	-	-	5	490	0	5.455	0	81	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000048677	Tpcn2	ENSMUST00000208148	ENSMUSP00000146736	TRANSLATION	nonsense_mediated_decay	start	-	5	503	0	6.175	0	108.6	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000048677	Tpcn2	ENSMUST00000209156	ENSMUSP00000146952	TRANSLATION	nonsense_mediated_decay	-	-	5	132	0	0.2	0	0	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000048677	Tpcn2	ENSMUST00000208841	ENSMUSP00000146538	TRANSLATION	nonsense_mediated_decay	-	-	1	533	0	6.055	0	107.9	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000048677	Tpcn2	ENSMUST00000208281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030521	Mphosph10	ENSMUST00000206047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030521	Mphosph10	ENSMUST00000032735	ENSMUSP00000032735	TRANSLATION	protein_coding	-	CCDS21333.1	1	681	0	0	0.5	709.6	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000030521	Mphosph10	ENSMUST00000205516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094819	Olfr53	ENSMUST00000211057	ENSMUSP00000147530	TRANSLATION	protein_coding	stop	-	2	102	0	0.4	0	44.2	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000094819	Olfr53	ENSMUST00000084456	ENSMUSP00000081494	TRANSLATION	protein_coding	-	CCDS57593.1	2	312	0	0.898	1.5	171.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094819	Olfr53	ENSMUST00000211399	ENSMUSP00000148158	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	37.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000030966	Trim21	ENSMUST00000209679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030966	Trim21	ENSMUST00000209907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030966	Trim21	ENSMUST00000106913	ENSMUSP00000102526	TRANSLATION	protein_coding	-	CCDS40051.1	1	462	16	4.464	0.5	214.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000030966	Trim21	ENSMUST00000210261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030966	Trim21	ENSMUST00000033264	ENSMUSP00000033264	TRANSLATION	protein_coding	-	CCDS40051.1	1	462	16	4.464	0.5	214.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035429	Ptprh	ENSMUST00000049113	ENSMUSP00000042396	TRANSLATION	protein_coding	-	CCDS51974.1	1	971	11	7.65	1.5	446.8	1	3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000035429	Ptprh	ENSMUST00000205341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035429	Ptprh	ENSMUST00000205417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035429	Ptprh	ENSMUST00000206999	ENSMUSP00000145543	TRANSLATION	nonsense_mediated_decay	-	-	1	971	11	7.65	1.5	446.8	1	3,-4	-	-	-1	MINOR
ENSMUSG00000035429	Ptprh	ENSMUST00000166650	ENSMUSP00000125833	TRANSLATION	protein_coding	-	CCDS51974.1	5	971	11	7.65	1.5	446.8	1	3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000095773	Vmn2r38	ENSMUST00000108554	ENSMUSP00000104194	TRANSLATION	protein_coding	-	CCDS57489.1	5	861	4	2.74	0.5	389.2	0	1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000040390	Map3k10	ENSMUST00000152032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040390	Map3k10	ENSMUST00000138243	ENSMUSP00000146275	TRANSLATION	protein_coding	-	-	1	289	21	2	0	212.2	0	-4,-5	-	-	10.572	MINOR
ENSMUSG00000040390	Map3k10	ENSMUST00000133551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040390	Map3k10	ENSMUST00000108341	ENSMUSP00000103978	TRANSLATION	protein_coding	-	-	5	942	21	4.2	0	262.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040390	Map3k10	ENSMUST00000036453	ENSMUSP00000037725	TRANSLATION	protein_coding	-	CCDS39850.2	1	940	21	4.2	0.5	262.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000003545	Fosb	ENSMUST00000208326	ENSMUSP00000146569	TRANSLATION	protein_coding	-	-	5	299	0	2	0	32.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000003545	Fosb	ENSMUST00000003640	ENSMUSP00000003640	TRANSLATION	protein_coding	-	CCDS20897.1	1	338	0	2	7.5	32.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000003545	Fosb	ENSMUST00000208230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003545	Fosb	ENSMUST00000208505	ENSMUSP00000146525	TRANSLATION	protein_coding	-	-	5	201	0	1	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000003545	Fosb	ENSMUST00000207716	ENSMUSP00000146949	TRANSLATION	protein_coding	-	-	5	263	0	1	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000003545	Fosb	ENSMUST00000207334	ENSMUSP00000147210	TRANSLATION	protein_coding	-	-	5	302	0	1	2.4	0	0	-4,-5	-	-	3.645	MINOR
ENSMUSG00000003545	Fosb	ENSMUST00000208446	ENSMUSP00000146789	TRANSLATION	protein_coding	-	CCDS85225.1	1	237	0	2	1.7	32.4	0	-4,-5	-	-	12.324	MINOR
ENSMUSG00000053111	Fank1	ENSMUST00000151031	ENSMUSP00000119929	TRANSLATION	protein_coding	stop	-	3	152	0	4.194	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053111	Fank1	ENSMUST00000211077	ENSMUSP00000147559	TRANSLATION	protein_coding	stop	-	3	96	0	1.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053111	Fank1	ENSMUST00000065359	ENSMUSP00000069013	TRANSLATION	protein_coding	-	CCDS21937.1	1	344	0	8.794	5.1	152.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000053111	Fank1	ENSMUST00000209511	ENSMUSP00000147964	TRANSLATION	protein_coding	-	-	5	343	0	8.794	0	152.8	0	-4,-6	-	-	12	MINOR
ENSMUSG00000053111	Fank1	ENSMUST00000121560	ENSMUSP00000114136	TRANSLATION	protein_coding	-	-	5	126	0	1.33	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000175981	ENSMUSP00000135123	TRANSLATION	protein_coding	-	-	1	133	8	2.16	0	67.3	0	-4,-5	-	-	18	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000177462	ENSMUSP00000134917	TRANSLATION	protein_coding	-	-	5	180	6	1.16	0.5	28.3	0	-4,-5	-	-	10.248	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000176746	ENSMUSP00000135389	TRANSLATION	protein_coding	stop	-	2	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000210070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030788	Rnf141	ENSMUST00000176210	ENSMUSP00000135227	TRANSLATION	nonsense_mediated_decay	start	-	2	28	6	0.83	0	28.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000176716	ENSMUSP00000148202	TRANSLATION	protein_coding	-	-	2	87	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000176048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030788	Rnf141	ENSMUST00000148367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030788	Rnf141	ENSMUST00000175648	ENSMUSP00000135169	TRANSLATION	protein_coding	start	-	3	59	4	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000106682	ENSMUSP00000102293	TRANSLATION	protein_coding	-	CCDS40086.1	3	230	8	2.16	12.8	67.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030788	Rnf141	ENSMUST00000177520	ENSMUSP00000134958	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030788	Rnf141	ENSMUST00000177236	ENSMUSP00000134781	TRANSLATION	protein_coding	-	CCDS40086.1	1	230	8	2.16	12.8	67.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000073951	Olfr598	ENSMUST00000098202	ENSMUSP00000100474	TRANSLATION	protein_coding	-	CCDS40054.1	-	319	0	0.42	1.5	297.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073951	Olfr598	ENSMUST00000214765	ENSMUSP00000149199	TRANSLATION	protein_coding	-	CCDS40054.1	5	319	0	0.42	1.5	297.9	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047884	Klk9	ENSMUST00000005891	ENSMUSP00000005891	TRANSLATION	protein_coding	-	CCDS39937.1	1	251	19	4.3	0.5	222.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000096068	Olfr486	ENSMUST00000072035	ENSMUSP00000071918	TRANSLATION	protein_coding	-	CCDS21707.1	-	314	0	0.2	2.7	169	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066512	Klk1b5	ENSMUST00000074359	ENSMUSP00000073964	TRANSLATION	protein_coding	-	CCDS21201.1	1	261	7	4.3	0.5	243.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000078677	Gm10974	ENSMUST00000107486	ENSMUSP00000103110	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	0	0,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000056696	Olfr1350	ENSMUST00000207221	ENSMUSP00000146486	TRANSLATION	protein_coding	-	CCDS20781.1	3	308	0	0.2	0.5	170.5	5	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056696	Olfr1350	ENSMUST00000219278	ENSMUSP00000151318	TRANSLATION	protein_coding	-	CCDS20781.1	5	308	0	0.2	0.5	170.5	5	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056696	Olfr1350	ENSMUST00000070985	ENSMUSP00000069927	TRANSLATION	protein_coding	-	CCDS20781.1	-	308	0	0.2	0.5	170.5	5	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078118	Olfr483	ENSMUST00000215159	ENSMUSP00000150898	TRANSLATION	protein_coding	-	CCDS21705.1	3	315	0	0	1.5	171	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000078118	Olfr483	ENSMUST00000104917	ENSMUSP00000100517	TRANSLATION	protein_coding	-	CCDS21705.1	-	315	0	0	1.5	171	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044430	Klk12	ENSMUST00000107970	ENSMUSP00000103604	TRANSLATION	protein_coding	-	CCDS52226.1	5	247	16	4.4	5.1	230	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000044430	Klk12	ENSMUST00000014063	ENSMUSP00000014063	TRANSLATION	protein_coding	-	CCDS52226.1	1	247	16	4.4	5.1	230	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000003421	Nosip	ENSMUST00000209901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003421	Nosip	ENSMUST00000210998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003421	Nosip	ENSMUST00000210088	ENSMUSP00000148045	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	177.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003421	Nosip	ENSMUST00000003513	ENSMUSP00000003513	TRANSLATION	protein_coding	-	CCDS21228.1	1	301	2	0	1.5	177.4	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000003421	Nosip	ENSMUST00000211465	ENSMUSP00000148148	TRANSLATION	protein_coding	stop	-	2	237	1	0	0	177.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003421	Nosip	ENSMUST00000107829	ENSMUSP00000103460	TRANSLATION	protein_coding	-	CCDS52242.1	1	276	2	0	0.5	177.4	0	-4,-5	-	-	8	ALTERNATIVE:2
ENSMUSG00000003421	Nosip	ENSMUST00000210668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003421	Nosip	ENSMUST00000210520	ENSMUSP00000147796	TRANSLATION	protein_coding	-	-	5	151	0	0	0	177.4	0	-4,-5	-	-	6	MINOR
ENSMUSG00000003421	Nosip	ENSMUST00000209243	ENSMUSP00000147792	TRANSLATION	nonsense_mediated_decay	start	-	5	167	0	0	0	124.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003421	Nosip	ENSMUST00000209308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054746	Abca15	ENSMUST00000121265	ENSMUSP00000112821	TRANSLATION	protein_coding	-	-	5	1668	20	6.94	1.5	337.7	17	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000054746	Abca15	ENSMUST00000076272	ENSMUSP00000075621	TRANSLATION	protein_coding	-	CCDS40109.1	1	1668	20	6.94	1.5	337.7	17	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000054746	Abca15	ENSMUST00000140459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054746	Abca15	ENSMUST00000207220	ENSMUSP00000146489	TRANSLATION	protein_coding	-	-	1	109	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000085272	Sbk3	ENSMUST00000144863	ENSMUSP00000122507	TRANSLATION	protein_coding	-	CCDS57475.1	1	342	20	1.82	0.5	102.7	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000085272	Sbk3	ENSMUST00000133272	ENSMUSP00000120654	TRANSLATION	protein_coding	-	-	5	361	20	1.82	1.5	102.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040424	Hipk4	ENSMUST00000037134	ENSMUSP00000043175	TRANSLATION	protein_coding	-	-	1	412	0	0.8	0.5	0	0	-4,-5	-	-	1.848	MINOR
ENSMUSG00000040424	Hipk4	ENSMUST00000108353	ENSMUSP00000103990	TRANSLATION	protein_coding	-	CCDS21024.2	1	616	15	2.6	7.5	169.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000008435	Rdh13	ENSMUST00000008579	ENSMUSP00000008579	TRANSLATION	protein_coding	-	CCDS20735.1	1	334	30	4.955	5.1	121.8	0	0,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000008435	Rdh13	ENSMUST00000138798	ENSMUSP00000114390	TRANSLATION	protein_coding	stop	-	3	115	15	2.55	0	67.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008435	Rdh13	ENSMUST00000147599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008435	Rdh13	ENSMUST00000154033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008435	Rdh13	ENSMUST00000128299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008435	Rdh13	ENSMUST00000119485	ENSMUSP00000113433	TRANSLATION	nonsense_mediated_decay	-	-	1	299	24	3.705	0.5	40.4	0	0,-5	-	-	-1	MINOR
ENSMUSG00000115744	Vmn1r80	ENSMUST00000227205	ENSMUSP00000154216	TRANSLATION	protein_coding	-	CCDS20805.1	-	308	0	0	0.5	103.5	9	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000115744	Vmn1r80	ENSMUST00000075053	ENSMUSP00000074564	TRANSLATION	protein_coding	-	CCDS20805.1	-	308	0	0	0.5	103.5	9	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000115744	Vmn1r80	ENSMUST00000228047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115744	Vmn1r80	ENSMUST00000228578	ENSMUSP00000153967	TRANSLATION	protein_coding	-	CCDS20805.1	-	308	0	0	0.5	103.5	9	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000115744	Vmn1r80	ENSMUST00000227471	ENSMUSP00000154504	TRANSLATION	protein_coding	-	-	-	214	0	0	0	51.6	7	-1,-4	-	-	2.886	MINOR
ENSMUSG00000115744	Vmn1r80	ENSMUST00000227755	ENSMUSP00000154371	TRANSLATION	protein_coding	-	CCDS20805.1	-	308	0	0	0.5	103.5	9	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000115744	Vmn1r80	ENSMUST00000228028	ENSMUSP00000154548	TRANSLATION	protein_coding	-	-	-	214	0	0	0	51.6	7	-1,-4	-	-	2.886	MINOR
ENSMUSG00000115744	Vmn1r80	ENSMUST00000228563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115744	Vmn1r80	ENSMUST00000227240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063305	Psg20	ENSMUST00000076677	ENSMUSP00000075973	TRANSLATION	protein_coding	-	-	5	475	0	3.1	0.5	156.8	0	-2,-6	-	-	12	PRINCIPAL:5
ENSMUSG00000063305	Psg20	ENSMUST00000108482	ENSMUSP00000104122	TRANSLATION	protein_coding	-	-	5	472	0	3.1	0.5	156.8	0	-2,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000052675	Zfp112	ENSMUST00000206878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052675	Zfp112	ENSMUST00000215113	ENSMUSP00000150734	TRANSLATION	protein_coding	-	-	5	875	53	1.2	0.5	290.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052675	Zfp112	ENSMUST00000005413	ENSMUSP00000005413	TRANSLATION	protein_coding	-	CCDS39824.1	1	879	53	1.2	0.5	290.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000052675	Zfp112	ENSMUST00000120006	ENSMUSP00000113031	TRANSLATION	protein_coding	-	-	1	873	53	1.2	0.5	290.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030609	Aen	ENSMUST00000206661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030609	Aen	ENSMUST00000107425	ENSMUSP00000103048	TRANSLATION	protein_coding	-	CCDS39988.2	1	336	9	2.79	1.5	59.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030609	Aen	ENSMUST00000123824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030609	Aen	ENSMUST00000107421	ENSMUSP00000103044	TRANSLATION	protein_coding	-	CCDS52277.1	1	298	9	2.79	0.5	59.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000030609	Aen	ENSMUST00000172017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030609	Aen	ENSMUST00000205882	ENSMUSP00000146246	TRANSLATION	protein_coding	stop	-	1	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030609	Aen	ENSMUST00000107423	ENSMUSP00000103046	TRANSLATION	protein_coding	-	CCDS39988.2	5	336	9	2.79	1.5	59.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000030609	Aen	ENSMUST00000205861	ENSMUSP00000145715	TRANSLATION	protein_coding	start/stop	-	5	178	8	2.15	0	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030609	Aen	ENSMUST00000138167	ENSMUSP00000117331	TRANSLATION	protein_coding	stop	-	3	138	6	1	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057706	Mex3b	ENSMUST00000082237	ENSMUSP00000082168	TRANSLATION	protein_coding	-	CCDS52286.1	2	576	8	0.2	2.7	131.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000008683	Rps15a	ENSMUST00000172457	ENSMUSP00000127791	TRANSLATION	protein_coding	-	CCDS21768.1	1	130	0	3.91	21.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000008683	Rps15a	ENSMUST00000131374	ENSMUSP00000119975	TRANSLATION	protein_coding	-	CCDS21768.1	1	130	0	3.91	21.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000008683	Rps15a	ENSMUST00000128482	ENSMUSP00000114544	TRANSLATION	protein_coding	stop	-	5	71	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008683	Rps15a	ENSMUST00000106590	ENSMUSP00000102200	TRANSLATION	protein_coding	stop	-	1	108	0	3.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008683	Rps15a	ENSMUST00000106588	ENSMUSP00000102198	TRANSLATION	protein_coding	-	CCDS21768.1	3	130	0	3.91	21.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000008683	Rps15a	ENSMUST00000134270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008683	Rps15a	ENSMUST00000131840	ENSMUSP00000116061	TRANSLATION	protein_coding	stop	-	5	78	0	2.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066272	Olfr559	ENSMUST00000215657	ENSMUSP00000151100	TRANSLATION	protein_coding	-	CCDS21545.1	5	318	0	0.3	5.1	390.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066272	Olfr559	ENSMUST00000084816	ENSMUSP00000095820	TRANSLATION	protein_coding	-	CCDS21545.1	-	318	0	0.3	5.1	390.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000035901	Dennd5a	ENSMUST00000154002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035901	Dennd5a	ENSMUST00000130354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035901	Dennd5a	ENSMUST00000134331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035901	Dennd5a	ENSMUST00000151923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035901	Dennd5a	ENSMUST00000156858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035901	Dennd5a	ENSMUST00000080437	ENSMUSP00000079295	TRANSLATION	protein_coding	-	CCDS21741.1	1	1287	0	9.94	3.9	503.3	0	-4,-6	-	-	13	PRINCIPAL:3
ENSMUSG00000035901	Dennd5a	ENSMUST00000139579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035901	Dennd5a	ENSMUST00000106722	ENSMUSP00000102333	TRANSLATION	protein_coding	-	CCDS80781.1	1	1263	0	9.94	3.9	503.3	0	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000062369	Usp17lb	ENSMUST00000106814	ENSMUSP00000102427	TRANSLATION	protein_coding	-	-	1	467	12	0.42	0.5	178.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000062369	Usp17lb	ENSMUST00000076501	ENSMUSP00000075822	TRANSLATION	protein_coding	-	CCDS21628.1	1	468	12	0.42	0.5	178.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000009471	Myod1	ENSMUST00000072514	ENSMUSP00000072330	TRANSLATION	protein_coding	-	CCDS21277.1	1	318	0	0.8	7.5	241.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045777	Ifitm10	ENSMUST00000105988	ENSMUSP00000101608	TRANSLATION	protein_coding	-	CCDS85468.1	2	201	0	0	0.5	72.2	3	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000045777	Ifitm10	ENSMUST00000131791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045777	Ifitm10	ENSMUST00000123543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045777	Ifitm10	ENSMUST00000059223	ENSMUSP00000062728	TRANSLATION	protein_coding	-	CCDS40191.1	1	162	0	0	0.5	30.8	2	-4,-7	-	-	2.562	MINOR
ENSMUSG00000045777	Ifitm10	ENSMUST00000140032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045777	Ifitm10	ENSMUST00000084412	ENSMUSP00000081450	TRANSLATION	protein_coding	-	CCDS85467.1	1	130	0	0	1.7	72.2	3	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000011632	Pinlyp	ENSMUST00000011776	ENSMUSP00000011776	TRANSLATION	protein_coding	-	CCDS20954.1	1	212	0	0	1.5	45.2	0	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000037772	Mrpl23	ENSMUST00000038675	ENSMUSP00000039784	TRANSLATION	protein_coding	-	CCDS22032.1	1	146	0	3.33	1.5	0	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000037772	Mrpl23	ENSMUST00000137345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037772	Mrpl23	ENSMUST00000210803	ENSMUSP00000147311	TRANSLATION	protein_coding	-	-	3	101	0	2	0	0	0	-4,-5	-	-	3.342	MINOR
ENSMUSG00000037772	Mrpl23	ENSMUST00000210662	ENSMUSP00000148138	TRANSLATION	protein_coding	-	-	5	172	0	3	0	0	0	-4,-7	-	-	5.34	ALTERNATIVE:2
ENSMUSG00000037772	Mrpl23	ENSMUST00000209576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037772	Mrpl23	ENSMUST00000141098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037772	Mrpl23	ENSMUST00000145002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066100	Krtap5-1	ENSMUST00000084413	ENSMUSP00000137356	TRANSLATION	protein_coding	-	-	5	195	0	0	0	38.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066100	Krtap5-1	ENSMUST00000188274	ENSMUSP00000139752	TRANSLATION	protein_coding	-	CCDS80834.1	-	230	0	0	0.5	24.1	0	-4,-5	-	-	3.768	MINOR
ENSMUSG00000070564	Ntn5	ENSMUST00000107742	ENSMUSP00000103371	TRANSLATION	protein_coding	-	CCDS39957.1	1	452	0	2.85	0.5	139.5	0	0,-3	-	-	8.142	MINOR
ENSMUSG00000070564	Ntn5	ENSMUST00000182750	ENSMUSP00000138412	TRANSLATION	protein_coding	-	CCDS71964.1	1	383	0	3.65	0.5	177.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070564	Ntn5	ENSMUST00000183120	ENSMUSP00000138144	TRANSLATION	protein_coding	-	CCDS80723.1	1	393	0	2.85	0.5	57.8	0	0,-3	-	-	4.398	MINOR
ENSMUSG00000055723	Rras2	ENSMUST00000069449	ENSMUSP00000069752	TRANSLATION	protein_coding	-	CCDS21758.1	1	204	24	5.45	14.1	196.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000055723	Rras2	ENSMUST00000210075	ENSMUSP00000147655	TRANSLATION	nonsense_mediated_decay	-	-	1	139	21	4	0	146.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036528	Ppfibp2	ENSMUST00000239294	ENSMUSP00000159262	TRANSLATION	protein_coding	stop	-	-	157	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036528	Ppfibp2	ENSMUST00000208504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036528	Ppfibp2	ENSMUST00000208159	ENSMUSP00000147038	TRANSLATION	protein_coding	start	-	3	138	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036528	Ppfibp2	ENSMUST00000098134	ENSMUSP00000095738	TRANSLATION	protein_coding	-	CCDS52356.1	1	904	0	9	0.5	181	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036528	Ppfibp2	ENSMUST00000207852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036528	Ppfibp2	ENSMUST00000040056	ENSMUSP00000042574	TRANSLATION	protein_coding	-	CCDS21691.1	1	882	0	9	0.5	181	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036528	Ppfibp2	ENSMUST00000208956	ENSMUSP00000146889	TRANSLATION	protein_coding	stop	-	1	203	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011349	Dmrtc2	ENSMUST00000011493	ENSMUSP00000011493	TRANSLATION	protein_coding	-	CCDS20965.1	1	370	8	1.4	3.9	246.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000070426	Rnf121	ENSMUST00000096639	ENSMUSP00000094396	TRANSLATION	protein_coding	-	CCDS21523.1	1	327	8	0.78	13	0	11	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000070426	Rnf121	ENSMUST00000149976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070426	Rnf121	ENSMUST00000089052	ENSMUSP00000086453	TRANSLATION	protein_coding	-	-	1	304	8	0.78	4.7	0	11	-4,-7	-	-	13.232	MINOR
ENSMUSG00000070426	Rnf121	ENSMUST00000106953	ENSMUSP00000102566	TRANSLATION	protein_coding	-	-	1	310	8	0.78	0	0	11	-4,-7	-	-	12	MINOR
ENSMUSG00000070426	Rnf121	ENSMUST00000156119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070426	Rnf121	ENSMUST00000130074	ENSMUSP00000120705	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000070426	Rnf121	ENSMUST00000131104	ENSMUSP00000123134	TRANSLATION	protein_coding	start/stop	-	5	170	0	0	0	0	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000041571	Selenow	ENSMUST00000044355	ENSMUSP00000038943	TRANSLATION	protein_coding	-	CCDS39778.1	1	88	0	2.66	9.6	48	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000095430	Vmn1r72	ENSMUST00000209638	ENSMUSP00000148081	TRANSLATION	protein_coding	-	CCDS20799.1	3	306	0	0	1.5	85.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000095430	Vmn1r72	ENSMUST00000227010	ENSMUSP00000154511	TRANSLATION	protein_coding	-	CCDS20799.1	-	306	0	0	1.5	85.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000095430	Vmn1r72	ENSMUST00000053134	ENSMUSP00000052997	TRANSLATION	protein_coding	-	CCDS20799.1	-	306	0	0	1.5	85.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000095064	Vmn1r135	ENSMUST00000170931	ENSMUSP00000131702	TRANSLATION	protein_coding	-	CCDS52102.1	-	307	0	0	1.5	53.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058132	Vmn1r82	ENSMUST00000072801	ENSMUSP00000072580	TRANSLATION	protein_coding	-	CCDS57493.1	-	304	0	0	0.5	94.2	7	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058132	Vmn1r82	ENSMUST00000227672	ENSMUSP00000154524	TRANSLATION	protein_coding	-	-	-	187	0	0	0	52.1	5	-2,-4	-	-	3.318	MINOR
ENSMUSG00000058132	Vmn1r82	ENSMUST00000191002	ENSMUSP00000140782	TRANSLATION	protein_coding	start	-	-	305	0	0	0.5	94.2	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000109350	Gm44805	ENSMUST00000150569	ENSMUSP00000114512	TRANSLATION	protein_coding,RT	-	CCDS39801.1	2	97	0	1.75	6.3	132.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000109350	Gm44805	ENSMUST00000127648	ENSMUSP00000118305	TRANSLATION	protein_coding,RT	-	CCDS39801.1	5	97	0	1.75	6.3	132.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000006333	Rps9	ENSMUST00000108624	ENSMUSP00000104264	TRANSLATION	protein_coding	-	-	5	79	0	2	1.2	28.5	0	-4,-2	-	-	3.824	MINOR
ENSMUSG00000006333	Rps9	ENSMUST00000128729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006333	Rps9	ENSMUST00000006496	ENSMUSP00000006496	TRANSLATION	protein_coding	-	CCDS20726.1	1	194	0	4.33	12.5	70.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000006333	Rps9	ENSMUST00000108623	ENSMUSP00000104263	TRANSLATION	protein_coding	-	-	1	139	0	3	0.5	53.7	0	-4,-2	-	-	7.902	MINOR
ENSMUSG00000006333	Rps9	ENSMUST00000136858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006333	Rps9	ENSMUST00000126562	ENSMUSP00000120736	TRANSLATION	protein_coding	-	-	2	136	0	3	0.5	53.4	0	-4,-2	-	-	7.872	MINOR
ENSMUSG00000006333	Rps9	ENSMUST00000139818	ENSMUSP00000114894	TRANSLATION	protein_coding	stop	-	3	57	0	1.5	0	22.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006333	Rps9	ENSMUST00000108625	ENSMUSP00000104265	TRANSLATION	protein_coding	-	CCDS20726.1	2	194	0	4.33	12.5	70.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000006333	Rps9	ENSMUST00000146927	ENSMUSP00000116623	TRANSLATION	nonsense_mediated_decay	start	-	2	135	0	3	0	53.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006333	Rps9	ENSMUST00000146303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057997	Olfr541	ENSMUST00000080681	ENSMUSP00000079508	TRANSLATION	protein_coding	-	CCDS21984.1	-	312	0	0.6	1.5	166.8	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057997	Olfr541	ENSMUST00000210357	ENSMUSP00000148238	TRANSLATION	protein_coding	-	CCDS21984.1	2	312	0	0.6	1.5	166.8	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057997	Olfr541	ENSMUST00000209857	ENSMUSP00000147660	TRANSLATION	protein_coding	stop	-	3	128	0	0.6	0	61.9	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000038156	Spon1	ENSMUST00000084696	ENSMUSP00000081746	TRANSLATION	protein_coding	-	-	1	283	0	5.948	0	168	0	1,-2	-	-	0	MINOR
ENSMUSG00000038156	Spon1	ENSMUST00000046687	ENSMUSP00000041157	TRANSLATION	protein_coding	-	CCDS21757.1	1	807	9	12.81	6.3	642.3	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000078794	Dact3	ENSMUST00000108493	ENSMUSP00000104133	TRANSLATION	protein_coding	-	CCDS39788.1	1	610	0	0	1.5	123.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025147	Mob2	ENSMUST00000209732	ENSMUSP00000147340	TRANSLATION	protein_coding	-	-	3	266	4	3.834	2.9	196	0	-4,-6	-	-	16.458	MINOR
ENSMUSG00000025147	Mob2	ENSMUST00000210684	ENSMUSP00000148206	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025147	Mob2	ENSMUST00000211633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025147	Mob2	ENSMUST00000084418	ENSMUSP00000081455	TRANSLATION	protein_coding	-	CCDS40190.1	1	235	4	3.964	6.3	196	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025147	Mob2	ENSMUST00000209725	ENSMUSP00000147705	TRANSLATION	protein_coding	stop	-	5	126	2	2.134	0	63.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025147	Mob2	ENSMUST00000211505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025147	Mob2	ENSMUST00000211206	ENSMUSP00000147608	TRANSLATION	protein_coding	-	CCDS85460.1	1	150	2	1.964	0.5	128.5	0	-4,-5	-	-	5.948	MINOR
ENSMUSG00000025147	Mob2	ENSMUST00000211000	ENSMUSP00000147643	TRANSLATION	protein_coding	-	CCDS85460.1	5	150	2	1.964	0.5	128.5	0	-4,-5	-	-	5.948	MINOR
ENSMUSG00000054715	Zscan22	ENSMUST00000117189	ENSMUSP00000112684	TRANSLATION	protein_coding	-	CCDS71889.1	1	337	31	0.8	0.5	204	0	-4,-5	-	-	8.664	MINOR
ENSMUSG00000054715	Zscan22	ENSMUST00000119989	ENSMUSP00000113486	TRANSLATION	protein_coding	-	CCDS71889.1	1	337	31	0.8	0.5	204	0	-4,-5	-	-	8.664	MINOR
ENSMUSG00000054715	Zscan22	ENSMUST00000120809	ENSMUSP00000113314	TRANSLATION	protein_coding	-	CCDS20816.1	1	496	31	1.8	1.5	330.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054715	Zscan22	ENSMUST00000055528	ENSMUSP00000057651	TRANSLATION	protein_coding	-	CCDS20816.1	1	496	31	1.8	1.5	330.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057195	Ceacam13	ENSMUST00000108488	ENSMUSP00000104128	TRANSLATION	protein_coding	-	CCDS39790.1	1	263	0	1.16	0.5	26.8	0	-1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000057195	Ceacam13	ENSMUST00000081703	ENSMUSP00000080404	TRANSLATION	protein_coding	-	CCDS20866.1	1	263	0	1.16	0.5	26.8	0	-1,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000013928	Thap8	ENSMUST00000208866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013928	Thap8	ENSMUST00000014072	ENSMUSP00000014072	TRANSLATION	protein_coding	-	-	5	213	0	0	0	0	0	-3,-6	-	-	0	PRINCIPAL:5
ENSMUSG00000013928	Thap8	ENSMUST00000108187	ENSMUSP00000103822	TRANSLATION	protein_coding	-	-	2	125	0	0	0	0	0	-3,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000073937	Olfr633	ENSMUST00000098188	ENSMUSP00000095790	TRANSLATION	protein_coding	-	CCDS21599.1	-	312	0	0.2	1.5	400.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073937	Olfr633	ENSMUST00000216006	ENSMUSP00000149105	TRANSLATION	protein_coding	-	CCDS21599.1	5	312	0	0.2	1.5	400.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042831	Alkbh6	ENSMUST00000144951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042831	Alkbh6	ENSMUST00000139121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042831	Alkbh6	ENSMUST00000135882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042831	Alkbh6	ENSMUST00000148858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042831	Alkbh6	ENSMUST00000137550	ENSMUSP00000115896	TRANSLATION	nonsense_mediated_decay	-	-	5	112	3	0.624	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042831	Alkbh6	ENSMUST00000143369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042831	Alkbh6	ENSMUST00000060834	ENSMUSP00000051515	TRANSLATION	protein_coding	-	CCDS21085.1	1	238	14	1.404	5.1	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042831	Alkbh6	ENSMUST00000135319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042831	Alkbh6	ENSMUST00000136887	ENSMUSP00000121953	TRANSLATION	protein_coding	stop	-	2	215	14	1.404	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042831	Alkbh6	ENSMUST00000137870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042831	Alkbh6	ENSMUST00000132193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047794	Olfr685	ENSMUST00000209409	ENSMUSP00000147369	TRANSLATION	protein_coding	-	-	5	331	0	0.42	2.4	356.6	11	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047794	Olfr685	ENSMUST00000217432	ENSMUSP00000148994	TRANSLATION	protein_coding	-	-	5	331	0	0.42	2.4	356.6	11	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047794	Olfr685	ENSMUST00000214712	ENSMUSP00000151191	TRANSLATION	protein_coding	-	-	5	331	0	0.42	2.4	356.6	11	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047794	Olfr685	ENSMUST00000051355	ENSMUSP00000061561	TRANSLATION	protein_coding	-	CCDS21644.1	-	316	0	0.42	2.7	356.6	11	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000096861	Vmn2r68	ENSMUST00000233062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096861	Vmn2r68	ENSMUST00000061074	ENSMUSP00000129411	TRANSLATION	protein_coding	-	CCDS52290.1	5	851	4	2.4	0.5	340.8	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000096861	Vmn2r68	ENSMUST00000232921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038540	Tmc3	ENSMUST00000165388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038540	Tmc3	ENSMUST00000164944	ENSMUSP00000130348	TRANSLATION	protein_coding	-	-	5	1101	0	0	1.5	137.5	7	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000038540	Tmc3	ENSMUST00000171397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038540	Tmc3	ENSMUST00000163297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038540	Tmc3	ENSMUST00000039317	ENSMUSP00000046028	TRANSLATION	protein_coding	-	CCDS40012.1	1	1130	0	0	1.5	137.5	7	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000101232	Scgb1b15	ENSMUST00000189118	ENSMUSP00000139565	TRANSLATION	protein_coding	-	-	5	93	0	1.78	0.5	75.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034660	Galp	ENSMUST00000037553	ENSMUSP00000037408	TRANSLATION	protein_coding	-	CCDS20771.1	1	117	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000034660	Galp	ENSMUST00000130076	ENSMUSP00000146615	TRANSLATION	protein_coding	start/stop	-	1	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030727	Rabep2	ENSMUST00000148536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030727	Rabep2	ENSMUST00000150933	ENSMUSP00000123559	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0	0	68	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030727	Rabep2	ENSMUST00000150530	ENSMUSP00000122141	TRANSLATION	nonsense_mediated_decay	-	-	2	60	0	0	0	43.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030727	Rabep2	ENSMUST00000106407	ENSMUSP00000102015	TRANSLATION	protein_coding	-	CCDS21829.2	1	554	0	4.2	0.5	191.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000030727	Rabep2	ENSMUST00000141764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030727	Rabep2	ENSMUST00000106405	ENSMUSP00000102013	TRANSLATION	protein_coding	-	-	1	511	0	4.2	0	175.1	0	-4,-5	-	-	10.992	ALTERNATIVE:2
ENSMUSG00000030727	Rabep2	ENSMUST00000151304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030727	Rabep2	ENSMUST00000127154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030727	Rabep2	ENSMUST00000133300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031073	Fgf15	ENSMUST00000208515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031073	Fgf15	ENSMUST00000207033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031073	Fgf15	ENSMUST00000207040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031073	Fgf15	ENSMUST00000207229	ENSMUSP00000146870	TRANSLATION	protein_coding	stop	-	3	161	0	1.92	0	43.1	0	3,-4	-	-	-1	MINOR
ENSMUSG00000031073	Fgf15	ENSMUST00000033389	ENSMUSP00000033389	TRANSLATION	protein_coding	-	CCDS22053.1	1	218	0	3.8	1.5	72	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000003549	Ercc1	ENSMUST00000162197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003549	Ercc1	ENSMUST00000160369	ENSMUSP00000125655	TRANSLATION	protein_coding	-	CCDS52057.1	1	245	0	4.55	0.5	174.9	0	-4,-5	-	-	6.492	MINOR
ENSMUSG00000003549	Ercc1	ENSMUST00000161378	ENSMUSP00000135021	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003549	Ercc1	ENSMUST00000160192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003549	Ercc1	ENSMUST00000177486	ENSMUSP00000135161	TRANSLATION	nonsense_mediated_decay	start	-	2	37	0	0.75	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000003549	Ercc1	ENSMUST00000160909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003549	Ercc1	ENSMUST00000176723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003549	Ercc1	ENSMUST00000162992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003549	Ercc1	ENSMUST00000176818	ENSMUSP00000135767	TRANSLATION	protein_coding	start/stop	-	3	123	0	2.8	0	114.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003549	Ercc1	ENSMUST00000003645	ENSMUSP00000003645	TRANSLATION	protein_coding	-	CCDS20898.1	1	298	0	6.55	1.5	200	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048236	Ovch2	ENSMUST00000106755	ENSMUSP00000102366	TRANSLATION	protein_coding	-	CCDS21692.1	1	609	15	5.466	0.5	360.7	0	-1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000011427	Zfp790	ENSMUST00000032796	ENSMUSP00000032796	TRANSLATION	protein_coding	-	CCDS52174.1	1	779	51	1.2	1.5	331.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000011427	Zfp790	ENSMUST00000178162	ENSMUSP00000136932	TRANSLATION	protein_coding	-	CCDS52174.1	1	779	51	1.2	1.5	331.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000011427	Zfp790	ENSMUST00000207328	ENSMUSP00000146955	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030792	Dkkl1	ENSMUST00000033057	ENSMUSP00000033057	TRANSLATION	protein_coding	-	CCDS21235.1	1	230	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000030792	Dkkl1	ENSMUST00000210454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030792	Dkkl1	ENSMUST00000210741	ENSMUSP00000147678	TRANSLATION	protein_coding	-	-	2	183	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000030792	Dkkl1	ENSMUST00000209466	ENSMUSP00000147489	TRANSLATION	protein_coding	stop	-	3	219	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030854	Ptpn5	ENSMUST00000207172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030854	Ptpn5	ENSMUST00000209184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030854	Ptpn5	ENSMUST00000207344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030854	Ptpn5	ENSMUST00000209057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030854	Ptpn5	ENSMUST00000033142	ENSMUSP00000033142	TRANSLATION	protein_coding	-	CCDS21294.1	1	541	13	7.3	3.9	248.9	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000030854	Ptpn5	ENSMUST00000209161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030854	Ptpn5	ENSMUST00000208324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030854	Ptpn5	ENSMUST00000209179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030854	Ptpn5	ENSMUST00000208531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030854	Ptpn5	ENSMUST00000208437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030854	Ptpn5	ENSMUST00000102626	ENSMUSP00000099686	TRANSLATION	protein_coding	-	CCDS21294.1	1	541	13	7.3	3.9	248.9	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000055150	Zfp78	ENSMUST00000207347	ENSMUSP00000147154	TRANSLATION	protein_coding	-	CCDS20774.1	1	512	44	1.6	0.5	314.7	0	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000055150	Zfp78	ENSMUST00000207314	ENSMUSP00000146578	TRANSLATION	protein_coding	-	CCDS20775.1	1	480	44	1.6	0.5	314.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000055150	Zfp78	ENSMUST00000086323	ENSMUSP00000083503	TRANSLATION	protein_coding	-	CCDS20775.1	5	480	44	1.6	0.5	314.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000055150	Zfp78	ENSMUST00000208030	ENSMUSP00000146592	TRANSLATION	protein_coding	-	CCDS20775.1	1	480	44	1.6	0.5	314.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000055150	Zfp78	ENSMUST00000108559	ENSMUSP00000104199	TRANSLATION	protein_coding	-	CCDS20774.1	2	512	44	1.6	0.5	314.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000055150	Zfp78	ENSMUST00000208763	ENSMUSP00000146611	TRANSLATION	protein_coding	stop	-	5	129	0	1	0	83.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055150	Zfp78	ENSMUST00000208390	ENSMUSP00000147228	TRANSLATION	protein_coding	-	CCDS20775.1	1	480	44	1.6	0.5	314.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000030630	Fah	ENSMUST00000032865	ENSMUSP00000032865	TRANSLATION	protein_coding	-	CCDS21418.1	1	419	14	12.16	12.3	309	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000030630	Fah	ENSMUST00000128460	ENSMUSP00000121439	TRANSLATION	protein_coding	stop	-	5	141	8	4.33	0	84.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030630	Fah	ENSMUST00000153126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030630	Fah	ENSMUST00000134390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030630	Fah	ENSMUST00000209112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074109	Mrgprx2	ENSMUST00000186394	ENSMUSP00000140945	TRANSLATION	protein_coding	-	-	1	109	0	0.6	0	0	2	-1,-5	-	-	3.75	MINOR
ENSMUSG00000074109	Mrgprx2	ENSMUST00000098433	ENSMUSP00000127022	TRANSLATION	protein_coding	-	CCDS52258.1	1	352	0	0.96	0.5	34.1	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095239	Olfr497	ENSMUST00000213521	ENSMUSP00000150439	TRANSLATION	protein_coding	-	CCDS21715.1	3	314	0	0.2	1.5	182.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095239	Olfr497	ENSMUST00000076406	ENSMUSP00000075741	TRANSLATION	protein_coding	-	CCDS21715.1	-	314	0	0.2	1.5	182.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051182	Olfr655	ENSMUST00000216750	ENSMUSP00000150891	TRANSLATION	protein_coding	-	CCDS21621.1	5	308	0	0.42	1.7	313.7	7	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051182	Olfr655	ENSMUST00000057385	ENSMUSP00000054108	TRANSLATION	protein_coding	-	CCDS21621.1	-	308	0	0.42	1.7	313.7	7	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051182	Olfr655	ENSMUST00000215538	ENSMUSP00000150381	TRANSLATION	protein_coding	-	CCDS21621.1	5	308	0	0.42	1.7	313.7	7	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051182	Olfr655	ENSMUST00000215434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099898	Scgb1b17	ENSMUST00000187081	ENSMUSP00000139627	TRANSLATION	protein_coding	-	-	5	93	0	1.78	0.5	75.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000206018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000205618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000108074	ENSMUSP00000103709	TRANSLATION	protein_coding	-	CCDS21139.1	5	1059	0	0	1.5	177.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000206245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000146025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000132975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000085592	ENSMUSP00000082730	TRANSLATION	protein_coding	-	CCDS21139.1	1	1059	0	0	1.5	177.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000206399	ENSMUSP00000145762	TRANSLATION	protein_coding	-	-	1	847	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000205264	ENSMUSP00000145897	TRANSLATION	protein_coding	start/stop	-	3	278	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066571	4931406P16Rik	ENSMUST00000205581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002778	Kdelr1	ENSMUST00000211716	ENSMUSP00000148258	TRANSLATION	protein_coding	-	-	1	138	0	0	0	142.1	7	0,-4	-	-	2.898	MINOR
ENSMUSG00000002778	Kdelr1	ENSMUST00000211495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002778	Kdelr1	ENSMUST00000211234	ENSMUSP00000147273	TRANSLATION	protein_coding	-	-	2	150	0	0	2	146	6	-3,-5	-	-	3.348	MINOR
ENSMUSG00000002778	Kdelr1	ENSMUST00000002855	ENSMUSP00000002855	TRANSLATION	protein_coding	-	CCDS21268.1	1	212	0	0	19.5	193.8	9	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000002778	Kdelr1	ENSMUST00000211152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010476	Ebf3	ENSMUST00000210774	ENSMUSP00000147829	TRANSLATION	protein_coding	-	CCDS52422.1	1	596	4	10.998	17	642.1	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000010476	Ebf3	ENSMUST00000168203	ENSMUSP00000130334	TRANSLATION	protein_coding	-	CCDS52423.1	1	587	4	10.8	15	642.1	0	-4,-5	-	-	19.104	ALTERNATIVE:1
ENSMUSG00000010476	Ebf3	ENSMUST00000033378	ENSMUSP00000033378	TRANSLATION	protein_coding	-	CCDS21946.1	1	551	4	10.8	15	642.1	0	-4,-5	-	-	19.104	PRINCIPAL:3
ENSMUSG00000010476	Ebf3	ENSMUST00000106118	ENSMUSP00000101724	TRANSLATION	protein_coding	-	CCDS52423.1	5	587	4	10.8	15	642.1	0	-4,-5	-	-	19.104	ALTERNATIVE:1
ENSMUSG00000010476	Ebf3	ENSMUST00000209905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010476	Ebf3	ENSMUST00000209864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010476	Ebf3	ENSMUST00000169486	ENSMUSP00000132563	TRANSLATION	protein_coding	-	CCDS52423.1	5	587	4	10.8	15	642.1	0	-4,-5	-	-	19.104	ALTERNATIVE:1
ENSMUSG00000010476	Ebf3	ENSMUST00000209578	ENSMUSP00000147512	TRANSLATION	protein_coding	-	-	1	344	0	5.3	0	211.1	0	-4,-2	-	-	0	MINOR
ENSMUSG00000030983	Bccip	ENSMUST00000140472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030983	Bccip	ENSMUST00000151711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030983	Bccip	ENSMUST00000132885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030983	Bccip	ENSMUST00000157077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030983	Bccip	ENSMUST00000033282	ENSMUSP00000033282	TRANSLATION	protein_coding	-	CCDS21935.1	1	316	0	0	0.5	186.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000092416	Zfp141	ENSMUST00000174407	ENSMUSP00000133899	TRANSLATION	protein_coding	-	CCDS85276.1	1	685	40	1.4	0.5	314.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000092416	Zfp141	ENSMUST00000174489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092416	Zfp141	ENSMUST00000173439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092416	Zfp141	ENSMUST00000173489	ENSMUSP00000145574	TRANSLATION	protein_coding	stop	-	3	94	0	1	0	84.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030513	Pcsk6	ENSMUST00000055576	ENSMUSP00000053742	TRANSLATION	protein_coding	-	CCDS52267.1	5	959	22	13.13	0.5	463.8	0	0,3	-	-	18	PRINCIPAL:3
ENSMUSG00000030513	Pcsk6	ENSMUST00000176209	ENSMUSP00000135033	TRANSLATION	protein_coding	start	-	5	798	22	10.93	0	410.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030513	Pcsk6	ENSMUST00000177272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030513	Pcsk6	ENSMUST00000098391	ENSMUSP00000095992	TRANSLATION	protein_coding	-	CCDS71978.1	1	946	22	13.13	0.5	463.8	0	0,3	-	-	18	ALTERNATIVE:2
ENSMUSG00000030513	Pcsk6	ENSMUST00000176199	ENSMUSP00000135851	TRANSLATION	protein_coding	stop	-	3	164	10	3.9	0	71.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000030513	Pcsk6	ENSMUST00000177369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030733	Sh2b1	ENSMUST00000205889	ENSMUSP00000146282	TRANSLATION	protein_coding	-	CCDS85410.1	1	724	0	4.94	1.7	185.5	0	-4,-5	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000030733	Sh2b1	ENSMUST00000205733	ENSMUSP00000145754	TRANSLATION	protein_coding	-	CCDS85411.1	1	756	0	4.94	3.9	185.5	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000030733	Sh2b1	ENSMUST00000032978	ENSMUSP00000032978	TRANSLATION	protein_coding	-	CCDS40126.1	1	682	0	4.94	2.9	185.5	0	-4,-5	-	-	12.655	PRINCIPAL:3
ENSMUSG00000030733	Sh2b1	ENSMUST00000205497	ENSMUSP00000145842	TRANSLATION	protein_coding	-	CCDS85410.1	1	724	0	4.94	1.7	185.5	0	-4,-5	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000030733	Sh2b1	ENSMUST00000206664	ENSMUSP00000146121	TRANSLATION	nonsense_mediated_decay	-	-	1	443	0	2.94	0	132.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030733	Sh2b1	ENSMUST00000205440	ENSMUSP00000145554	TRANSLATION	protein_coding	-	CCDS85412.1	1	670	0	4.94	3.9	185.5	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000030733	Sh2b1	ENSMUST00000206515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030733	Sh2b1	ENSMUST00000206643	ENSMUSP00000146229	TRANSLATION	protein_coding	stop	-	2	73	0	0.8	0	70	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030733	Sh2b1	ENSMUST00000205340	ENSMUSP00000145953	TRANSLATION	protein_coding	-	CCDS85412.1	1	670	0	4.94	3.9	185.5	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000109969	Zscan4-ps3	ENSMUST00000210559	ENSMUSP00000147528	TRANSLATION	protein_coding	-	-	5	506	15	0.2	0.5	111.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049421	Zfp260	ENSMUST00000123095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049421	Zfp260	ENSMUST00000108200	ENSMUSP00000103835	TRANSLATION	protein_coding	-	CCDS21078.1	1	407	48	0.6	1.5	290.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049421	Zfp260	ENSMUST00000149302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049421	Zfp260	ENSMUST00000134365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049421	Zfp260	ENSMUST00000130526	ENSMUSP00000122253	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049421	Zfp260	ENSMUST00000182136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049421	Zfp260	ENSMUST00000050735	ENSMUSP00000052200	TRANSLATION	protein_coding	-	CCDS21078.1	1	407	48	0.6	1.5	290.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094063	Olfr638	ENSMUST00000218325	ENSMUSP00000151996	TRANSLATION	protein_coding	-	-	5	315	0	0	5.9	396.3	7	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000094063	Olfr638	ENSMUST00000209757	ENSMUSP00000148160	TRANSLATION	protein_coding	-	CCDS21601.1	-	321	0	0	2.7	396.3	7	-4,-7	-	-	6.694	MINOR
ENSMUSG00000090619	Vmn2r60	ENSMUST00000233771	ENSMUSP00000156805	TRANSLATION	protein_coding	-	CCDS52215.1	-	853	4	3.5	0.5	399.4	5	2,-3	-	-	16	PRINCIPAL:2
ENSMUSG00000090619	Vmn2r60	ENSMUST00000233266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090619	Vmn2r60	ENSMUST00000166447	ENSMUSP00000128493	TRANSLATION	protein_coding	-	-	5	853	4	3.34	0.5	399.4	5	1,-5	-	-	15.682	ALTERNATIVE:2
ENSMUSG00000073927	Olfr652	ENSMUST00000219111	ENSMUSP00000152027	TRANSLATION	protein_coding	-	CCDS21618.1	5	318	0	0.36	5.2	348.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073927	Olfr652	ENSMUST00000215410	ENSMUSP00000149718	TRANSLATION	protein_coding	-	CCDS21618.1	5	318	0	0.36	5.2	348.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073927	Olfr652	ENSMUST00000216131	ENSMUSP00000150811	TRANSLATION	protein_coding	-	CCDS21618.1	5	318	0	0.36	5.2	348.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000073927	Olfr652	ENSMUST00000098175	ENSMUSP00000095777	TRANSLATION	protein_coding	-	CCDS21618.1	-	318	0	0.36	5.2	348.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040298	Btbd16	ENSMUST00000048453	ENSMUSP00000035433	TRANSLATION	protein_coding	-	CCDS52416.1	5	522	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000040298	Btbd16	ENSMUST00000207219	ENSMUSP00000146827	TRANSLATION	nonsense_mediated_decay	-	-	5	329	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040298	Btbd16	ENSMUST00000207155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040298	Btbd16	ENSMUST00000208593	ENSMUSP00000146849	TRANSLATION	protein_coding	-	-	5	506	0	0	0.5	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000030605	Mfge8	ENSMUST00000206844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030605	Mfge8	ENSMUST00000205688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030605	Mfge8	ENSMUST00000206338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030605	Mfge8	ENSMUST00000205929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030605	Mfge8	ENSMUST00000205649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030605	Mfge8	ENSMUST00000107409	ENSMUSP00000103032	TRANSLATION	protein_coding	-	CCDS39989.1	1	426	8	8.61	1.5	266.2	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000030605	Mfge8	ENSMUST00000205563	ENSMUSP00000145720	TRANSLATION	nonsense_mediated_decay	-	-	3	84	4	0.75	0	28.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000030605	Mfge8	ENSMUST00000205526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030605	Mfge8	ENSMUST00000032825	ENSMUSP00000032825	TRANSLATION	protein_coding	-	CCDS21379.1	1	463	8	8.61	0.5	266.2	0	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000030605	Mfge8	ENSMUST00000205494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078591	Hs3st4	ENSMUST00000106437	ENSMUSP00000102045	TRANSLATION	protein_coding	-	CCDS57584.1	3	449	20	1.4	0.5	148.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000100058	Scgb2b18	ENSMUST00000186529	ENSMUSP00000139701	TRANSLATION	protein_coding	-	CCDS80701.1	5	112	0	1.67	0.5	96.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000030674	Qprt	ENSMUST00000032912	ENSMUSP00000032912	TRANSLATION	protein_coding	-	CCDS40138.1	1	299	14	3	5.1	273.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000030674	Qprt	ENSMUST00000129332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030674	Qprt	ENSMUST00000142403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035713	Usp35	ENSMUST00000168435	ENSMUSP00000137927	TRANSLATION	protein_coding	-	CCDS59734.1	5	1009	8	6.8	0.5	144.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035713	Usp35	ENSMUST00000181351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035713	Usp35	ENSMUST00000180476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035713	Usp35	ENSMUST00000181651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035713	Usp35	ENSMUST00000181354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035713	Usp35	ENSMUST00000139582	ENSMUSP00000137726	TRANSLATION	protein_coding	-	CCDS59734.1	5	1009	8	6.8	0.5	144.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000115267	Vmn1r76	ENSMUST00000226947	ENSMUSP00000154710	TRANSLATION	protein_coding	-	-	-	289	0	0	0	102.6	10	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000115267	Vmn1r76	ENSMUST00000058772	ENSMUSP00000055518	TRANSLATION	protein_coding	-	CCDS20803.1	-	324	0	0	0.5	102.6	10	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000115267	Vmn1r76	ENSMUST00000226300	ENSMUSP00000154198	TRANSLATION	protein_coding	-	-	-	289	0	0	0	102.6	10	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002968	Med25	ENSMUST00000207848	ENSMUSP00000146864	TRANSLATION	protein_coding	start/stop	-	5	205	0	4.33	0	197.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000207490	ENSMUSP00000146422	TRANSLATION	protein_coding	start/stop	-	5	164	0	0	0	100.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000207206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002968	Med25	ENSMUST00000207196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002968	Med25	ENSMUST00000207788	ENSMUSP00000147117	TRANSLATION	nonsense_mediated_decay	-	-	3	69	0	0	0	62	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000208552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002968	Med25	ENSMUST00000209191	ENSMUSP00000146676	TRANSLATION	protein_coding	start/stop	-	3	242	0	5.13	0	248.2	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000003049	ENSMUSP00000003049	TRANSLATION	protein_coding	-	CCDS21220.1	1	745	0	5.13	2.7	812.3	0	-4,-7	-	-	12	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000208253	ENSMUSP00000146405	TRANSLATION	protein_coding	-	-	1	801	4	5.13	1	800.3	0	-4,-7	-	-	15.28	PRINCIPAL:1
ENSMUSG00000002968	Med25	ENSMUST00000207278	ENSMUSP00000146595	TRANSLATION	protein_coding	-	CCDS85291.1	1	618	0	5.13	0.5	678.2	0	-4,-6	-	-	6	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000123130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002968	Med25	ENSMUST00000208551	ENSMUSP00000146498	TRANSLATION	protein_coding	-	-	2	742	0	5.13	0	755.9	0	-4,-7	-	-	8.616	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000208556	ENSMUSP00000146475	TRANSLATION	nonsense_mediated_decay	-	-	3	103	0	0	0	60.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002968	Med25	ENSMUST00000207654	ENSMUSP00000146817	TRANSLATION	protein_coding	stop	-	1	599	0	4.13	0	611.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019370	Calm3	ENSMUST00000173139	ENSMUSP00000134395	TRANSLATION	protein_coding	start	-	3	65	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019370	Calm3	ENSMUST00000019514	ENSMUSP00000019514	TRANSLATION	protein_coding	-	CCDS39789.1	1	149	24	4.16	21.5	174.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019370	Calm3	ENSMUST00000173557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019370	Calm3	ENSMUST00000172594	ENSMUSP00000133559	TRANSLATION	nonsense_mediated_decay	start	-	5	39	8	1.33	0	48.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066197	Gpr139	ENSMUST00000084650	ENSMUSP00000081700	TRANSLATION	protein_coding	-	CCDS21778.1	1	345	0	0.88	1.5	61.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060188	Cxcl17	ENSMUST00000200880	ENSMUSP00000144096	TRANSLATION	protein_coding	-	CCDS80680.1	1	119	0	0	0.5	157	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060188	Cxcl17	ENSMUST00000074040	ENSMUSP00000073687	TRANSLATION	protein_coding	-	-	5	128	0	0	0	133.9	0	3,-2	-	-	4.614	MINOR
ENSMUSG00000039018	Mtg1	ENSMUST00000124253	ENSMUSP00000147668	TRANSLATION	protein_coding	stop	-	5	40	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039018	Mtg1	ENSMUST00000036977	ENSMUSP00000036491	TRANSLATION	protein_coding	-	CCDS52432.1	1	326	15	5.56	1.5	49.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039018	Mtg1	ENSMUST00000140579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039018	Mtg1	ENSMUST00000141070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039018	Mtg1	ENSMUST00000211171	ENSMUSP00000147754	TRANSLATION	nonsense_mediated_decay	start	-	5	52	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039018	Mtg1	ENSMUST00000155723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039018	Mtg1	ENSMUST00000150667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031072	LTO1	ENSMUST00000128057	ENSMUSP00000115840	TRANSLATION	protein_coding	-	CCDS85486.1	1	142	0	0	0.5	42.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031072	LTO1	ENSMUST00000033388	ENSMUSP00000033388	TRANSLATION	protein_coding	-	CCDS22054.1	1	151	0	0	3.5	42.5	0	-4,-5	-	-	7	PRINCIPAL:3
ENSMUSG00000031072	LTO1	ENSMUST00000105895	ENSMUSP00000101515	TRANSLATION	protein_coding	-	CCDS85485.1	2	161	0	0	0.5	42.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031072	LTO1	ENSMUST00000141737	ENSMUSP00000147240	TRANSLATION	protein_coding	stop	-	3	111	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031072	LTO1	ENSMUST00000207453	ENSMUSP00000146778	TRANSLATION	protein_coding	start	-	5	81	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031072	LTO1	ENSMUST00000093964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031072	LTO1	ENSMUST00000147460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031072	LTO1	ENSMUST00000207094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038968	Klk1b16	ENSMUST00000005933	ENSMUSP00000005933	TRANSLATION	protein_coding	-	CCDS21197.1	1	261	7	4.3	0.5	209.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000063394	Olfr293	ENSMUST00000214401	ENSMUSP00000149592	TRANSLATION	protein_coding	-	CCDS21434.1	5	336	0	0.2	0.5	153.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063394	Olfr293	ENSMUST00000215280	ENSMUSP00000149959	TRANSLATION	protein_coding	-	CCDS21434.1	5	336	0	0.2	0.5	153.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063394	Olfr293	ENSMUST00000081474	ENSMUSP00000080193	TRANSLATION	protein_coding	-	CCDS21434.1	-	336	0	0.2	0.5	153.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094011	Vmn1r94	ENSMUST00000164526	ENSMUSP00000127861	TRANSLATION	protein_coding	-	CCDS52068.1	-	305	0	0	1.5	54.2	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000025470	Zfp511	ENSMUST00000210419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025470	Zfp511	ENSMUST00000210089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025470	Zfp511	ENSMUST00000168194	ENSMUSP00000129154	TRANSLATION	protein_coding	-	CCDS52431.1	2	250	10	0	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025470	Zfp511	ENSMUST00000211789	ENSMUSP00000147966	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025470	Zfp511	ENSMUST00000210936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025470	Zfp511	ENSMUST00000210882	ENSMUSP00000147401	TRANSLATION	protein_coding	start	-	2	218	10	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063160	Numbl	ENSMUST00000144010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063160	Numbl	ENSMUST00000134215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063160	Numbl	ENSMUST00000132897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063160	Numbl	ENSMUST00000149805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063160	Numbl	ENSMUST00000079258	ENSMUSP00000078245	TRANSLATION	protein_coding	-	CCDS21016.1	1	604	0	4.3	1.7	199.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000066760	Psg16	ENSMUST00000131153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066760	Psg16	ENSMUST00000118367	ENSMUSP00000113025	TRANSLATION	protein_coding	-	CCDS20861.2	1	386	0	3.82	0.5	123.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066760	Psg16	ENSMUST00000071399	ENSMUSP00000071348	TRANSLATION	protein_coding	-	CCDS80666.1	1	395	0	3.22	0.5	109.5	0	-4,-6	-	-	9.966	MINOR
ENSMUSG00000066760	Psg16	ENSMUST00000152671	ENSMUSP00000118977	TRANSLATION	protein_coding	stop	-	2	262	0	2.02	0	80.6	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000032875	Arhgef17	ENSMUST00000209041	ENSMUSP00000146564	TRANSLATION	protein_coding	-	-	1	1048	0	5.345	0	144.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000032875	Arhgef17	ENSMUST00000208735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032875	Arhgef17	ENSMUST00000208482	ENSMUSP00000146907	TRANSLATION	protein_coding	start/stop	-	3	278	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032875	Arhgef17	ENSMUST00000107032	ENSMUSP00000102647	TRANSLATION	protein_coding	-	CCDS40040.1	5	2057	0	4.985	0.5	144.4	0	-4,-7	-	-	11.28	PRINCIPAL:2
ENSMUSG00000047248	C2cd3	ENSMUST00000120196	ENSMUSP00000113728	TRANSLATION	protein_coding	start	-	5	899	0	0	0	19.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047248	C2cd3	ENSMUST00000156559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047248	C2cd3	ENSMUST00000184779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047248	C2cd3	ENSMUST00000119647	ENSMUSP00000113360	TRANSLATION	protein_coding	start	-	1	1566	0	0	0	44.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000047248	C2cd3	ENSMUST00000133464	ENSMUSP00000118864	TRANSLATION	nonsense_mediated_decay	-	-	1	250	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047248	C2cd3	ENSMUST00000051777	ENSMUSP00000062637	TRANSLATION	protein_coding	-	CCDS57568.1	5	2323	0	0	0.5	44.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000047248	C2cd3	ENSMUST00000185084	ENSMUSP00000139071	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047248	C2cd3	ENSMUST00000208018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047248	C2cd3	ENSMUST00000185051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047248	C2cd3	ENSMUST00000151573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047248	C2cd3	ENSMUST00000208753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047248	C2cd3	ENSMUST00000098259	ENSMUSP00000095859	TRANSLATION	protein_coding	-	-	5	2130	0	0	0	44.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000047248	C2cd3	ENSMUST00000184657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047248	C2cd3	ENSMUST00000184753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030878	Cdr2	ENSMUST00000140247	ENSMUSP00000146376	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000030878	Cdr2	ENSMUST00000033169	ENSMUSP00000033169	TRANSLATION	protein_coding	-	CCDS21798.1	1	455	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000030878	Cdr2	ENSMUST00000207722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066263	Olfr639	ENSMUST00000106862	ENSMUSP00000102475	TRANSLATION	protein_coding	-	CCDS40063.1	-	316	0	0.16	6.4	400.4	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000066263	Olfr639	ENSMUST00000215653	ENSMUSP00000149743	TRANSLATION	protein_coding	-	CCDS40063.1	5	316	0	0.16	6.4	400.4	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000070551	Mrgprb5	ENSMUST00000094389	ENSMUSP00000091953	TRANSLATION	protein_coding	-	CCDS21300.1	-	322	0	0.42	0.5	28.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073917	Olfr665	ENSMUST00000098165	ENSMUSP00000095768	TRANSLATION	protein_coding	-	CCDS21630.1	-	316	0	0.2	2.7	349	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073917	Olfr665	ENSMUST00000216257	ENSMUSP00000150283	TRANSLATION	protein_coding	-	CCDS21630.1	5	316	0	0.2	2.7	349	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073917	Olfr665	ENSMUST00000216971	ENSMUSP00000150229	TRANSLATION	protein_coding	-	CCDS21630.1	5	316	0	0.2	2.7	349	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073917	Olfr665	ENSMUST00000215761	ENSMUSP00000150603	TRANSLATION	protein_coding	-	CCDS21630.1	5	316	0	0.2	2.7	349	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000030647	Ndufc2	ENSMUST00000032882	ENSMUSP00000032882	TRANSLATION	protein_coding	-	CCDS21457.1	1	120	0	2.5	6.3	164.5	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000030647	Ndufc2	ENSMUST00000149122	ENSMUSP00000146005	TRANSLATION	protein_coding	-	-	2	108	0	2	0	128.2	1	-4,-7	-	-	8.622	MINOR
ENSMUSG00000109926	Gm45808	ENSMUST00000210701	ENSMUSP00000147942	TRANSLATION	protein_coding,RT	start/stop	-	5	263	3	5.25	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000040734	Ppp1r13l	ENSMUST00000150448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040734	Ppp1r13l	ENSMUST00000140836	ENSMUSP00000114443	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040734	Ppp1r13l	ENSMUST00000127785	ENSMUSP00000116351	TRANSLATION	protein_coding	stop	-	5	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040734	Ppp1r13l	ENSMUST00000132655	ENSMUSP00000118309	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040734	Ppp1r13l	ENSMUST00000047621	ENSMUSP00000047839	TRANSLATION	protein_coding	-	CCDS20899.1	1	824	0	4.5	2.9	92	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000108948	Olfr695	ENSMUST00000216868	ENSMUSP00000149773	TRANSLATION	protein_coding	-	CCDS21667.1	5	315	0	0.36	1.5	163.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051515	Fam181b	ENSMUST00000051179	ENSMUSP00000146473	TRANSLATION	protein_coding	-	-	-	384	0	0	0	77.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000073920	Olfr661	ENSMUST00000098168	ENSMUSP00000095770	TRANSLATION	protein_coding	-	CCDS21626.1	-	319	0	0.36	1.5	247.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000073920	Olfr661	ENSMUST00000215864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073920	Olfr661	ENSMUST00000214876	ENSMUSP00000151208	TRANSLATION	protein_coding	-	CCDS21626.1	5	319	0	0.36	1.5	247.4	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035951	Ascl3	ENSMUST00000035372	ENSMUSP00000037702	TRANSLATION	protein_coding	-	CCDS21737.1	1	174	0	0.4	1.5	58.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042606	Hirip3	ENSMUST00000037248	ENSMUSP00000035535	TRANSLATION	protein_coding	-	CCDS21849.1	1	601	0	0	0.5	36.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042606	Hirip3	ENSMUST00000146120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042606	Hirip3	ENSMUST00000150942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042606	Hirip3	ENSMUST00000138793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042606	Hirip3	ENSMUST00000205512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042606	Hirip3	ENSMUST00000129746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042606	Hirip3	ENSMUST00000132808	ENSMUSP00000115145	TRANSLATION	protein_coding	stop	-	2	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025497	Cdhr5	ENSMUST00000080654	ENSMUSP00000079484	TRANSLATION	protein_coding	-	CCDS22006.1	1	669	10	4.895	0.5	0	1	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000025497	Cdhr5	ENSMUST00000210124	ENSMUSP00000148123	TRANSLATION	protein_coding	start/stop	-	5	333	0	1.435	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000025497	Cdhr5	ENSMUST00000167263	ENSMUSP00000127292	TRANSLATION	protein_coding	-	CCDS52442.1	1	831	10	4.895	0.5	0	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025497	Cdhr5	ENSMUST00000210386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025497	Cdhr5	ENSMUST00000210773	ENSMUSP00000147472	TRANSLATION	nonsense_mediated_decay	start	-	5	131	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000108951	ENSMUSP00000104579	TRANSLATION	protein_coding	-	CCDS52685.1	1	397	0	0	4	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000132229	ENSMUSP00000117269	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000108950	ENSMUSP00000104578	TRANSLATION	protein_coding	-	CCDS22716.1	1	407	0	0	4	0	0	-4,-5	-	-	1	PRINCIPAL:3
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000108948	ENSMUSP00000104576	TRANSLATION	protein_coding	-	CCDS52686.1	1	297	0	0	1.7	0	0	-4,-5	-	-	0.233	ALTERNATIVE:2
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000034281	ENSMUSP00000034281	TRANSLATION	protein_coding	-	CCDS22716.1	1	407	0	0	4	0	0	-4,-5	-	-	1	PRINCIPAL:3
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000153725	ENSMUSP00000114976	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000212268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000212474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031824	6430548M08Rik	ENSMUST00000144682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031820	Babam1	ENSMUST00000212769	ENSMUSP00000148639	TRANSLATION	protein_coding	start	-	2	114	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031820	Babam1	ENSMUST00000212087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031820	Babam1	ENSMUST00000213093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031820	Babam1	ENSMUST00000212383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031820	Babam1	ENSMUST00000002473	ENSMUSP00000002473	TRANSLATION	protein_coding	-	CCDS40381.1	1	333	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000003824	Syce2	ENSMUST00000136026	ENSMUSP00000122159	TRANSLATION	protein_coding	-	CCDS22481.1	1	171	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000003824	Syce2	ENSMUST00000003922	ENSMUSP00000003922	TRANSLATION	nonsense_mediated_decay	-	-	2	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003824	Syce2	ENSMUST00000144466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003824	Syce2	ENSMUST00000170296	ENSMUSP00000131438	TRANSLATION	protein_coding	-	CCDS52620.1	2	177	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000051671	Coa6	ENSMUST00000211868	ENSMUSP00000148765	TRANSLATION	protein_coding	-	CCDS52709.1	1	79	0	0	9.8	65.1	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000051671	Coa6	ENSMUST00000059093	ENSMUSP00000058279	TRANSLATION	protein_coding	-	CCDS52709.1	1	79	0	0	9.8	65.1	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000001300	Efnb2	ENSMUST00000152698	ENSMUSP00000116027	TRANSLATION	protein_coding	start/stop	-	3	218	0	2	0	59.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000001300	Efnb2	ENSMUST00000209169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001300	Efnb2	ENSMUST00000001319	ENSMUSP00000001319	TRANSLATION	protein_coding	-	CCDS22090.1	1	336	0	4.8	5.5	170.7	1	0,0	-	-	14	PRINCIPAL:1
ENSMUSG00000050756	Defb6	ENSMUST00000063112	ENSMUSP00000060836	TRANSLATION	protein_coding	-	CCDS40255.1	1	63	0	0	1.5	33.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000037214	Thap1	ENSMUST00000127536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037214	Thap1	ENSMUST00000209926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037214	Thap1	ENSMUST00000130231	ENSMUSP00000121153	TRANSLATION	protein_coding	stop	-	3	180	2	1	0	41.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037214	Thap1	ENSMUST00000036807	ENSMUSP00000042464	TRANSLATION	protein_coding	-	CCDS22208.1	1	210	5	1.75	1.5	63	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024266	Adad2	ENSMUST00000098361	ENSMUSP00000095964	TRANSLATION	protein_coding	-	CCDS52683.1	1	561	16	3	0.5	262.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000000740	Rpl13	ENSMUST00000132275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000740	Rpl13	ENSMUST00000129311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000740	Rpl13	ENSMUST00000212887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000740	Rpl13	ENSMUST00000000756	ENSMUSP00000000756	TRANSLATION	protein_coding	-	CCDS22747.1	1	211	0	0	21.5	277	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000000740	Rpl13	ENSMUST00000152444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038457	Tmem255b	ENSMUST00000209950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038457	Tmem255b	ENSMUST00000211356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038457	Tmem255b	ENSMUST00000167505	ENSMUSP00000130504	TRANSLATION	protein_coding	-	CCDS52486.1	1	328	0	0	0.5	533.8	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038457	Tmem255b	ENSMUST00000210804	ENSMUSP00000147581	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038457	Tmem255b	ENSMUST00000167071	ENSMUSP00000127421	TRANSLATION	protein_coding	-	CCDS52487.1	1	307	0	0	0.5	362.6	4	-4,-7	-	-	0	MINOR
ENSMUSG00000061974	Cldn24	ENSMUST00000079639	ENSMUSP00000078584	TRANSLATION	protein_coding	-	CCDS52549.1	-	220	0	0.6	2.7	79	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031553	Adam3	ENSMUST00000170318	ENSMUSP00000132620	TRANSLATION	nonsense_mediated_decay	-	-	1	120	0	0	0	45.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031553	Adam3	ENSMUST00000171438	ENSMUSP00000132651	TRANSLATION	protein_coding	-	CCDS22196.1	2	822	13	6.259	0.5	436.1	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031553	Adam3	ENSMUST00000169598	ENSMUSP00000130818	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031553	Adam3	ENSMUST00000166986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031553	Adam3	ENSMUST00000171611	ENSMUSP00000126617	TRANSLATION	protein_coding	-	-	1	352	1	2.98	0	251.9	0	3,-2	-	-	0	MINOR
ENSMUSG00000031553	Adam3	ENSMUST00000033958	ENSMUSP00000033958	TRANSLATION	protein_coding	-	CCDS22196.1	1	822	13	6.259	0.5	436.1	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031553	Adam3	ENSMUST00000167431	ENSMUSP00000127479	TRANSLATION	protein_coding	start	-	3	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031553	Adam3	ENSMUST00000167703	ENSMUSP00000132634	TRANSLATION	nonsense_mediated_decay	-	-	3	65	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031553	Adam3	ENSMUST00000170740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031553	Adam3	ENSMUST00000168662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055553	Kxd1	ENSMUST00000138586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055553	Kxd1	ENSMUST00000121623	ENSMUSP00000113804	TRANSLATION	protein_coding	-	-	5	232	4	3.5	0	335.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000055553	Kxd1	ENSMUST00000117580	ENSMUSP00000112561	TRANSLATION	protein_coding	-	-	5	114	0	0	0	108.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000137610	ENSMUSP00000121539	TRANSLATION	protein_coding	stop	-	5	100	0	0	0	108.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000118850	ENSMUSP00000113816	TRANSLATION	protein_coding	-	-	2	219	0	0	0	108.2	0	-4,0	-	-	0	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000155677	ENSMUSP00000123548	TRANSLATION	nonsense_mediated_decay	-	-	3	114	0	0	0	108.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000138260	ENSMUSP00000123438	TRANSLATION	protein_coding	stop	-	5	193	0	2.5	0	225.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000093456	ENSMUSP00000091165	TRANSLATION	protein_coding	-	CCDS52574.1	1	177	0	0	2.9	108.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055553	Kxd1	ENSMUST00000132867	ENSMUSP00000123679	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036712	Cyld	ENSMUST00000210302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036712	Cyld	ENSMUST00000209532	ENSMUSP00000147654	TRANSLATION	protein_coding	-	CCDS52633.1	5	955	8	12.95	8.8	419.7	0	-4,-5	-	-	20.922	ALTERNATIVE:1
ENSMUSG00000036712	Cyld	ENSMUST00000209742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036712	Cyld	ENSMUST00000211671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036712	Cyld	ENSMUST00000209722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036712	Cyld	ENSMUST00000043526	ENSMUSP00000039834	TRANSLATION	protein_coding	-	-	1	955	8	12.95	8.8	419.7	0	-4,-5	-	-	20.922	ALTERNATIVE:1
ENSMUSG00000036712	Cyld	ENSMUST00000109626	ENSMUSP00000105254	TRANSLATION	protein_coding	-	CCDS22513.1	5	952	8	12.95	8.8	421	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000036712	Cyld	ENSMUST00000209206	ENSMUSP00000147904	TRANSLATION	protein_coding	-	CCDS85579.1	5	770	8	11.15	0.5	204.8	0	-4,-5	-	-	8.4	MINOR
ENSMUSG00000036712	Cyld	ENSMUST00000209559	ENSMUSP00000147426	TRANSLATION	protein_coding	-	CCDS22513.1	1	952	8	12.95	8.8	421	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000036712	Cyld	ENSMUST00000098519	ENSMUSP00000096119	TRANSLATION	protein_coding	-	CCDS52633.1	5	955	8	12.95	8.8	419.7	0	-4,-5	-	-	20.922	ALTERNATIVE:1
ENSMUSG00000036712	Cyld	ENSMUST00000211554	ENSMUSP00000148037	TRANSLATION	protein_coding	-	CCDS22513.1	1	952	8	12.95	8.8	421	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000054400	Cklf	ENSMUST00000211809	ENSMUSP00000148697	TRANSLATION	protein_coding	-	CCDS85592.1	1	120	0	0	0.5	0	6	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000054400	Cklf	ENSMUST00000212259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054400	Cklf	ENSMUST00000211829	ENSMUSP00000148371	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000054400	Cklf	ENSMUST00000212410	ENSMUSP00000148816	TRANSLATION	nonsense_mediated_decay	-	-	1	122	0	0	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000054400	Cklf	ENSMUST00000212688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054400	Cklf	ENSMUST00000212939	ENSMUSP00000148804	TRANSLATION	protein_coding	-	-	3	84	0	0	0	0	5	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000054400	Cklf	ENSMUST00000098464	ENSMUSP00000096064	TRANSLATION	protein_coding	-	CCDS40449.1	1	96	0	0	1.5	0	5	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000054400	Cklf	ENSMUST00000212422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054400	Cklf	ENSMUST00000034342	ENSMUSP00000034342	TRANSLATION	protein_coding	-	CCDS40450.1	1	152	0	0	1.5	0	8	-4,-5	-	-	0	PRINCIPAL:4
ENSMUSG00000054400	Cklf	ENSMUST00000212433	ENSMUSP00000148362	TRANSLATION	protein_coding	-	-	1	86	0	0	0	0	5	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000019139	Isyna1	ENSMUST00000210358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019139	Isyna1	ENSMUST00000210878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019139	Isyna1	ENSMUST00000211501	ENSMUSP00000147430	TRANSLATION	protein_coding	start/stop	-	5	79	6	1.846	0	44.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000019139	Isyna1	ENSMUST00000211117	ENSMUSP00000148101	TRANSLATION	protein_coding	stop	-	3	41	5	1.33	0	58.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019139	Isyna1	ENSMUST00000210005	ENSMUSP00000148077	TRANSLATION	protein_coding	-	CCDS22373.1	5	557	35	10.24	3.9	460.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000019139	Isyna1	ENSMUST00000019283	ENSMUSP00000019283	TRANSLATION	protein_coding	-	CCDS22373.1	1	557	35	10.24	3.9	460.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000019139	Isyna1	ENSMUST00000211773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019139	Isyna1	ENSMUST00000209285	ENSMUSP00000147836	TRANSLATION	nonsense_mediated_decay	-	-	5	146	6	3.446	0	108.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019139	Isyna1	ENSMUST00000209751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031609	Sap30	ENSMUST00000034022	ENSMUSP00000034022	TRANSLATION	protein_coding	-	CCDS22316.1	1	220	4	4	6.3	202.9	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025808	Ccdc7a	ENSMUST00000214889	ENSMUSP00000149790	TRANSLATION	protein_coding	-	-	5	1642	0	0	0	254.1	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000025808	Ccdc7a	ENSMUST00000217343	ENSMUSP00000150598	TRANSLATION	nonsense_mediated_decay	start	-	5	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025808	Ccdc7a	ENSMUST00000216104	ENSMUSP00000150983	TRANSLATION	protein_coding	start	-	5	277	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025808	Ccdc7a	ENSMUST00000095158	ENSMUSP00000092780	TRANSLATION	protein_coding	-	CCDS40524.1	1	371	0	0	0.5	254.1	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000025808	Ccdc7a	ENSMUST00000108747	ENSMUSP00000104379	TRANSLATION	protein_coding	-	CCDS57649.1	1	160	0	0	0.5	214.8	0	-4,-6	-	-	3.642	MINOR
ENSMUSG00000025808	Ccdc7a	ENSMUST00000213135	ENSMUSP00000150055	TRANSLATION	protein_coding	start	-	5	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025808	Ccdc7a	ENSMUST00000125112	ENSMUSP00000117961	TRANSLATION	protein_coding	stop	-	5	348	0	0	0	254.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079003	Samd1	ENSMUST00000095228	ENSMUSP00000092853	TRANSLATION	protein_coding	-	CCDS40404.1	5	519	0	1.2	0.5	35.8	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000079003	Samd1	ENSMUST00000209606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038102	Trappc11	ENSMUST00000120987	ENSMUSP00000113779	TRANSLATION	protein_coding	-	-	1	176	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000038102	Trappc11	ENSMUST00000039061	ENSMUSP00000047562	TRANSLATION	protein_coding	-	CCDS22296.1	1	1133	0	0	5.1	340.5	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000038102	Trappc11	ENSMUST00000125065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038102	Trappc11	ENSMUST00000131551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038102	Trappc11	ENSMUST00000123958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000130965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000130275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000117643	ENSMUSP00000113748	TRANSLATION	nonsense_mediated_decay	-	-	1	555	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001062	Vps9d1	ENSMUST00000155853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001062	Vps9d1	ENSMUST00000124508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000146136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000149490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000155869	ENSMUSP00000122184	TRANSLATION	nonsense_mediated_decay	-	-	1	233	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001062	Vps9d1	ENSMUST00000129591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000122363	ENSMUSP00000113575	TRANSLATION	protein_coding	-	CCDS52698.1	1	649	0	1.9	0.5	86.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000001062	Vps9d1	ENSMUST00000118279	ENSMUSP00000113634	TRANSLATION	protein_coding	-	CCDS80942.1	1	650	0	1.9	0.5	84.7	0	-4,-5	-	-	11.886	ALTERNATIVE:2
ENSMUSG00000001062	Vps9d1	ENSMUST00000137569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001062	Vps9d1	ENSMUST00000127978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043664	Tmem221	ENSMUST00000052072	ENSMUSP00000058317	TRANSLATION	protein_coding	-	CCDS52586.1	1	230	0	0	4.1	158.4	0	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000033862	Cdk10	ENSMUST00000212904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033862	Cdk10	ENSMUST00000212028	ENSMUSP00000148549	TRANSLATION	nonsense_mediated_decay	start	-	5	115	8	1.58	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033862	Cdk10	ENSMUST00000212361	ENSMUSP00000148436	TRANSLATION	nonsense_mediated_decay	-	-	1	129	8	1.58	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033862	Cdk10	ENSMUST00000213005	ENSMUSP00000148435	TRANSLATION	protein_coding	-	CCDS85629.1	1	289	8	6.1994	7.6	184.5	0	-4,-5	-	-	10.746	MINOR
ENSMUSG00000033862	Cdk10	ENSMUST00000212749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033862	Cdk10	ENSMUST00000212497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033862	Cdk10	ENSMUST00000036880	ENSMUSP00000045527	TRANSLATION	protein_coding	-	CCDS22751.1	1	360	16	7.4494	3.9	224.8	0	-4,-5	-	-	19.317	PRINCIPAL:1
ENSMUSG00000033862	Cdk10	ENSMUST00000212193	ENSMUSP00000148661	TRANSLATION	nonsense_mediated_decay	-	-	2	140	13	2.6894	0	69.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033862	Cdk10	ENSMUST00000212784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033862	Cdk10	ENSMUST00000212035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033862	Cdk10	ENSMUST00000212021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033862	Cdk10	ENSMUST00000212532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051147	Nat2	ENSMUST00000163856	ENSMUSP00000130065	TRANSLATION	protein_coding	-	CCDS22338.1	1	290	12	1	5.1	321.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000051147	Nat2	ENSMUST00000093470	ENSMUSP00000091181	TRANSLATION	protein_coding	-	CCDS22338.1	1	290	12	1	5.1	321.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000034308	Sdr42e1	ENSMUST00000174450	ENSMUSP00000133837	TRANSLATION	protein_coding	stop	-	2	189	28	1.2	0	138.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034308	Sdr42e1	ENSMUST00000173522	ENSMUSP00000133782	TRANSLATION	protein_coding	-	CCDS22701.1	1	394	28	1.38	2.7	226.1	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034308	Sdr42e1	ENSMUST00000037955	ENSMUSP00000044457	TRANSLATION	protein_coding	-	CCDS22701.1	1	394	28	1.38	2.7	226.1	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061048	Cdh3	ENSMUST00000080797	ENSMUSP00000079613	TRANSLATION	protein_coding	-	CCDS22637.1	1	822	52	12.88	1.5	388	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000037103	Dcaf15	ENSMUST00000210279	ENSMUSP00000147690	TRANSLATION	protein_coding	-	-	1	600	0	0	3.9	271.7	0	-4,-6	-	-	7	ALTERNATIVE:2
ENSMUSG00000037103	Dcaf15	ENSMUST00000210625	ENSMUSP00000147657	TRANSLATION	nonsense_mediated_decay	-	-	2	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037103	Dcaf15	ENSMUST00000041367	ENSMUSP00000038568	TRANSLATION	protein_coding	-	CCDS40406.1	1	638	0	0	0.5	271.7	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000048310	Pskh1	ENSMUST00000049699	ENSMUSP00000061700	TRANSLATION	protein_coding	-	CCDS22619.1	1	424	18	1.4	6.5	245.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041308	Sntb2	ENSMUST00000212298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041308	Sntb2	ENSMUST00000212524	ENSMUSP00000148684	TRANSLATION	protein_coding	-	CCDS22642.1	1	520	0	1.88	1.5	69.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000041308	Sntb2	ENSMUST00000047425	ENSMUSP00000037324	TRANSLATION	protein_coding	-	-	1	531	0	1.88	0	69.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000031591	Asah1	ENSMUST00000143057	ENSMUSP00000117362	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	62.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000031591	Asah1	ENSMUST00000110417	ENSMUSP00000106047	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031591	Asah1	ENSMUST00000131796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031591	Asah1	ENSMUST00000034000	ENSMUSP00000034000	TRANSLATION	protein_coding	-	CCDS22262.1	1	394	0	0	3.9	258.2	0	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000031591	Asah1	ENSMUST00000126561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031480	Thsd1	ENSMUST00000069828	ENSMUSP00000067701	TRANSLATION	protein_coding	-	CCDS22172.1	1	851	0	0.8	2.9	38	1	0,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000031480	Thsd1	ENSMUST00000160585	ENSMUSP00000125118	TRANSLATION	protein_coding	-	CCDS80862.1	5	798	0	0	2.9	0	1	0,-3	-	-	0	MINOR
ENSMUSG00000031480	Thsd1	ENSMUST00000162447	ENSMUSP00000148214	TRANSLATION	protein_coding	-	CCDS85512.1	1	790	0	0.8	0.5	38	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031816	Mthfsd	ENSMUST00000140260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031816	Mthfsd	ENSMUST00000156606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031816	Mthfsd	ENSMUST00000116415	ENSMUSP00000112116	TRANSLATION	protein_coding	-	CCDS52691.1	1	372	11	1.4	0.5	115.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031816	Mthfsd	ENSMUST00000145991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031816	Mthfsd	ENSMUST00000126431	ENSMUSP00000119673	TRANSLATION	protein_coding	stop	-	5	279	11	0	0	109.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000151576	ENSMUSP00000148598	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	0	0	23	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000128503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031816	Mthfsd	ENSMUST00000138908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031816	Mthfsd	ENSMUST00000134758	ENSMUSP00000148797	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000128052	ENSMUSP00000148803	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000139782	ENSMUSP00000115382	TRANSLATION	protein_coding	-	-	5	300	11	0	0	99.5	0	-4,-5	-	-	11.046	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000133037	ENSMUSP00000117429	TRANSLATION	protein_coding	-	-	5	319	11	0	0	109.1	0	-4,-5	-	-	11.622	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000149718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031816	Mthfsd	ENSMUST00000213028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031816	Mthfsd	ENSMUST00000047282	ENSMUSP00000044172	TRANSLATION	protein_coding	-	CCDS22723.1	1	353	11	1.4	0.5	106.4	0	-4,-6	-	-	17.46	MINOR
ENSMUSG00000031816	Mthfsd	ENSMUST00000133058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031700	Gpt2	ENSMUST00000034136	ENSMUSP00000034136	TRANSLATION	protein_coding	-	CCDS22499.1	1	522	17	10.3	6.3	113.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000031700	Gpt2	ENSMUST00000132932	ENSMUSP00000115968	TRANSLATION	nonsense_mediated_decay	-	-	1	158	1	2.8	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031700	Gpt2	ENSMUST00000143659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031700	Gpt2	ENSMUST00000143846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031700	Gpt2	ENSMUST00000140189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036913	Trim67	ENSMUST00000041106	ENSMUSP00000040601	TRANSLATION	protein_coding	-	CCDS52704.1	1	768	15	2.7	0.5	144	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036913	Trim67	ENSMUST00000167588	ENSMUSP00000130343	TRANSLATION	protein_coding	-	CCDS52704.1	5	768	15	2.7	0.5	144	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036913	Trim67	ENSMUST00000211867	ENSMUSP00000148625	TRANSLATION	nonsense_mediated_decay	-	-	1	768	15	2.7	0.5	144	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004996	Mri1	ENSMUST00000140850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004996	Mri1	ENSMUST00000125498	ENSMUSP00000117115	TRANSLATION	protein_coding	start/stop	-	3	228	7	3.75	0	176.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004996	Mri1	ENSMUST00000126435	ENSMUSP00000122623	TRANSLATION	protein_coding	-	CCDS22473.1	1	369	12	5.75	1.5	266.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004996	Mri1	ENSMUST00000005122	ENSMUSP00000005122	TRANSLATION	nonsense_mediated_decay	start	-	5	158	4	2	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004996	Mri1	ENSMUST00000127747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049946	BC030500	ENSMUST00000062978	ENSMUSP00000131717	TRANSLATION	protein_coding	-	CCDS40345.1	1	123	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000049946	BC030500	ENSMUST00000160055	ENSMUSP00000130369	TRANSLATION	protein_coding	stop	-	5	185	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031584	Gsr	ENSMUST00000149528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031584	Gsr	ENSMUST00000154745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031584	Gsr	ENSMUST00000033992	ENSMUSP00000033992	TRANSLATION	protein_coding	-	CCDS22235.1	1	500	63	11.33	0.5	194.4	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000047747	Rnf150	ENSMUST00000211020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047747	Rnf150	ENSMUST00000211714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047747	Rnf150	ENSMUST00000078525	ENSMUSP00000077610	TRANSLATION	protein_coding	-	CCDS40402.1	1	437	8	2.92	3.9	74	0	2,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000031555	Adam9	ENSMUST00000208247	ENSMUSP00000146545	TRANSLATION	protein_coding	-	CCDS85516.1	1	863	19	9.46	0.5	534.8	1	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000031555	Adam9	ENSMUST00000084035	ENSMUSP00000081048	TRANSLATION	protein_coding	-	-	1	845	19	9.46	1.5	534.8	1	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000031555	Adam9	ENSMUST00000211319	ENSMUSP00000148096	TRANSLATION	nonsense_mediated_decay	start	-	5	130	1	0.75	0	35.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031555	Adam9	ENSMUST00000207132	ENSMUSP00000147165	TRANSLATION	protein_coding	stop	-	5	159	4	1.9	0	80.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000031555	Adam9	ENSMUST00000084032	ENSMUSP00000081045	TRANSLATION	protein_coding	-	-	1	841	19	9.46	0	534.8	1	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000051952	Olfr371	ENSMUST00000218663	ENSMUSP00000151714	TRANSLATION	protein_coding	-	CCDS22496.1	5	312	0	0.36	3.9	184.5	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000051952	Olfr371	ENSMUST00000070849	ENSMUSP00000077921	TRANSLATION	protein_coding	-	CCDS22496.1	-	312	0	0.36	3.9	184.5	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000037406	Htra4	ENSMUST00000176814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037406	Htra4	ENSMUST00000084031	ENSMUSP00000081044	TRANSLATION	protein_coding	-	CCDS40301.1	1	483	9	6.83	0.5	217.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031641	Cbr4	ENSMUST00000156535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031641	Cbr4	ENSMUST00000150932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031641	Cbr4	ENSMUST00000034058	ENSMUSP00000034058	TRANSLATION	protein_coding	-	CCDS40349.1	1	236	28	5.3	15	179.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000031641	Cbr4	ENSMUST00000155442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031641	Cbr4	ENSMUST00000126575	ENSMUSP00000117069	TRANSLATION	protein_coding	stop	-	3	138	16	2.9	0	66.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031641	Cbr4	ENSMUST00000130495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049482	Ctu2	ENSMUST00000212499	ENSMUSP00000148714	TRANSLATION	protein_coding	start	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049482	Ctu2	ENSMUST00000149925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049482	Ctu2	ENSMUST00000134127	ENSMUSP00000119237	TRANSLATION	protein_coding	stop	-	3	249	8	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049482	Ctu2	ENSMUST00000128472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049482	Ctu2	ENSMUST00000131934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049482	Ctu2	ENSMUST00000146634	ENSMUSP00000119931	TRANSLATION	protein_coding	stop	-	5	111	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049482	Ctu2	ENSMUST00000154099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049482	Ctu2	ENSMUST00000136253	ENSMUSP00000116104	TRANSLATION	protein_coding	start	-	2	107	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000049482	Ctu2	ENSMUST00000151855	ENSMUSP00000133622	TRANSLATION	nonsense_mediated_decay	-	-	1	410	11	0	0	55	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049482	Ctu2	ENSMUST00000116412	ENSMUSP00000112113	TRANSLATION	protein_coding	-	CCDS52694.1	1	514	11	0	0.5	74.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036151	Tm6sf2	ENSMUST00000124742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036151	Tm6sf2	ENSMUST00000149928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036151	Tm6sf2	ENSMUST00000110160	ENSMUSP00000105788	TRANSLATION	protein_coding	-	CCDS80889.1	1	378	0	0	5.1	61.3	8	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000036151	Tm6sf2	ENSMUST00000049197	ENSMUSP00000046114	TRANSLATION	protein_coding	-	CCDS22357.1	1	376	0	0	5.1	61.3	8	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000036151	Tm6sf2	ENSMUST00000148015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071089	Trim75	ENSMUST00000095295	ENSMUSP00000092932	TRANSLATION	protein_coding	-	CCDS22330.1	1	467	8	1.15	0.5	177.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071089	Trim75	ENSMUST00000210982	ENSMUSP00000148052	TRANSLATION	protein_coding	stop	-	2	26	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074439	Defa5	ENSMUST00000098892	ENSMUSP00000096491	TRANSLATION	protein_coding	-	CCDS22152.1	1	93	0	0	0.5	114	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000046295	Ankle1	ENSMUST00000125290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046295	Ankle1	ENSMUST00000119976	ENSMUSP00000113162	TRANSLATION	protein_coding	-	CCDS52583.1	1	534	0	3.26	0.5	72.7	0	-3,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000046295	Ankle1	ENSMUST00000120725	ENSMUSP00000112797	TRANSLATION	protein_coding	-	CCDS80893.1	1	514	0	3.05	1.5	72.7	0	-3,-6	-	-	11.58	ALTERNATIVE:2
ENSMUSG00000046295	Ankle1	ENSMUST00000136522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046295	Ankle1	ENSMUST00000124520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047986	Palm3	ENSMUST00000142367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047986	Palm3	ENSMUST00000055077	ENSMUSP00000051396	TRANSLATION	protein_coding	-	CCDS40405.1	1	734	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000047986	Palm3	ENSMUST00000154171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062991	Nrg1	ENSMUST00000239055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062991	Nrg1	ENSMUST00000239051	ENSMUSP00000159025	TRANSLATION	protein_coding	start	-	-	324	4	4.038	0	73.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062991	Nrg1	ENSMUST00000073884	ENSMUSP00000073546	TRANSLATION	protein_coding	-	CCDS40315.1	1	700	4	2.096	6.3	654.8	6	-4,-5	-	-	10.734	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062991	Nrg1	ENSMUST00000238879	ENSMUSP00000159099	TRANSLATION	protein_coding	-	-	-	420	4	3.638	0	73.1	0	-2,1	-	-	9.064	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062991	Nrg1	ENSMUST00000208335	ENSMUSP00000146375	TRANSLATION	protein_coding	start/stop	-	5	300	4	1.95	0	398.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208819	ENSMUSP00000146403	TRANSLATION	protein_coding	-	-	5	459	4	4.04	1.2	447.4	5	-4,-5	-	-	9.944	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238826	ENSMUSP00000159036	TRANSLATION	protein_coding	-	-	-	241	4	4.038	1.2	73.1	0	-4,-5	-	-	9.938	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238791	ENSMUSP00000158879	TRANSLATION	protein_coding	-	-	-	604	4	3.776	0	702.2	5	-4,-5	-	-	14.938	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238842	ENSMUSP00000159112	TRANSLATION	protein_coding	-	-	-	695	4	1.95	5.1	657.4	6	-4,-5	-	-	10.144	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208488	ENSMUSP00000147121	TRANSLATION	protein_coding	-	-	5	663	4	3.665	0	706.3	5	-4,-5	-	-	14.962	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062991	Nrg1	ENSMUST00000209107	ENSMUSP00000146617	TRANSLATION	protein_coding	-	-	5	858	4	4.106	0.5	706.3	5	-2,1	-	-	15.844	ALTERNATIVE:2
ENSMUSG00000062991	Nrg1	ENSMUST00000238816	ENSMUSP00000158948	TRANSLATION	protein_coding	-	-	-	485	4	3.665	0	447.4	5	-4,-5	-	-	9.118	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062991	Nrg1	ENSMUST00000239151	ENSMUSP00000158859	TRANSLATION	protein_coding	-	-	-	433	4	3.706	0	447.4	5	-4,-5	-	-	9.202	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000207470	ENSMUSP00000146456	TRANSLATION	protein_coding	-	-	1	645	4	4.106	1.7	706.3	5	-4,-5	-	-	16.108	PRINCIPAL:3
ENSMUSG00000062991	Nrg1	ENSMUST00000207417	ENSMUSP00000146905	TRANSLATION	protein_coding	-	-	5	637	4	4.04	1.2	706.3	5	-4,-5	-	-	15.788	ALTERNATIVE:2
ENSMUSG00000062991	Nrg1	ENSMUST00000208206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062991	Nrg1	ENSMUST00000239080	ENSMUSP00000159015	TRANSLATION	protein_coding	-	-	-	247	4	3.76	0	75.7	0	-4,-5	-	-	9.31	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208598	ENSMUSP00000146478	TRANSLATION	protein_coding	-	-	5	423	4	3.96	0	449.1	5	-4,-5	-	-	9.706	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000238812	ENSMUSP00000159096	TRANSLATION	protein_coding	-	-	-	296	4	2.028	1.2	21.6	1	-4,-5	-	-	5.918	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000209022	ENSMUSP00000146842	TRANSLATION	protein_coding	stop	-	5	472	4	3.84	0	73.1	0	-2,1	-	-	-1	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208617	ENSMUSP00000146857	TRANSLATION	protein_coding	-	-	5	462	4	3.96	1.7	450	5	-4,-5	-	-	9.97	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000239032	ENSMUSP00000158913	TRANSLATION	protein_coding	start	-	-	206	4	3.638	0	73.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208497	ENSMUSP00000146816	TRANSLATION	protein_coding	-	-	1	483	4	2.096	1.2	395	6	-4,-5	-	-	6.056	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208931	ENSMUSP00000146507	TRANSLATION	protein_coding	start/stop	-	5	135	4	1.83	0	21.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000207678	ENSMUSP00000159071	TRANSLATION	protein_coding	-	-	1	285	4	2.35	0	397.6	5	-4,-7	-	-	6.49	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000207584	ENSMUSP00000158871	TRANSLATION	protein_coding	-	-	1	302	4	1.75	0	24.2	1	-4,-5	-	-	5.29	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000239067	ENSMUSP00000158989	TRANSLATION	protein_coding	-	-	-	603	4	3.64	1.2	706.3	5	-4,-5	-	-	14.99	MINOR
ENSMUSG00000062991	Nrg1	ENSMUST00000208205	ENSMUSP00000147156	TRANSLATION	protein_coding	-	-	5	640	4	3.96	1.2	708.9	5	-4,-5	-	-	15.782	ALTERNATIVE:2
ENSMUSG00000031708	Tecr	ENSMUST00000238861	ENSMUSP00000159114	TRANSLATION	protein_coding	stop	-	-	206	0	2.08	0	0	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000211972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031708	Tecr	ENSMUST00000212187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031708	Tecr	ENSMUST00000212630	ENSMUSP00000148368	TRANSLATION	protein_coding	stop	-	3	92	0	1.25	0	0	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000212418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031708	Tecr	ENSMUST00000212703	ENSMUSP00000148299	TRANSLATION	protein_coding	stop	-	1	130	0	0	0	58.9	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000212136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031708	Tecr	ENSMUST00000019382	ENSMUSP00000019382	TRANSLATION	protein_coding	-	CCDS40403.1	1	308	0	2.58	17.5	104.4	9	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031708	Tecr	ENSMUST00000212575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031708	Tecr	ENSMUST00000238997	ENSMUSP00000159187	TRANSLATION	protein_coding	-	-	-	342	0	2.58	0	104.4	9	-4,-5	-	-	12	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000212285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031708	Tecr	ENSMUST00000212652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031708	Tecr	ENSMUST00000212990	ENSMUSP00000148721	TRANSLATION	protein_coding	-	-	1	177	0	0	0	104.4	4	-4,-2	-	-	6	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000165740	ENSMUSP00000131389	TRANSLATION	protein_coding	-	CCDS52609.1	1	293	0	2.08	1.5	104.4	9	-4,-5	-	-	10.956	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000163837	ENSMUSP00000128329	TRANSLATION	protein_coding	-	-	1	362	0	2.08	0	104.4	9	-4,-5	-	-	10.836	MINOR
ENSMUSG00000031708	Tecr	ENSMUST00000212005	ENSMUSP00000148498	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031443	F7	ENSMUST00000033820	ENSMUSP00000033820	TRANSLATION	protein_coding	-	CCDS22104.1	1	446	11	6.33	1.5	344.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000058056	Palld	ENSMUST00000153495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058056	Palld	ENSMUST00000121200	ENSMUSP00000112374	TRANSLATION	protein_coding	-	CCDS80880.1	1	663	0	7.635	1.5	213.8	0	-4,0	-	-	0.684	MINOR
ENSMUSG00000058056	Palld	ENSMUST00000123523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058056	Palld	ENSMUST00000121493	ENSMUSP00000113874	TRANSLATION	protein_coding	-	CCDS80881.1	1	1002	0	9.413	0.5	288.9	0	-4,-7	-	-	5.346	MINOR
ENSMUSG00000058056	Palld	ENSMUST00000136825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058056	Palld	ENSMUST00000034057	ENSMUSP00000034057	TRANSLATION	protein_coding	-	CCDS40350.1	5	1113	0	10.293	0.5	370.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000058056	Palld	ENSMUST00000121785	ENSMUSP00000112442	TRANSLATION	protein_coding	-	CCDS80882.1	1	1408	0	10.293	0.5	370.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000058056	Palld	ENSMUST00000135439	ENSMUSP00000119792	TRANSLATION	protein_coding	stop	-	1	336	0	6.135	0	145.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058056	Palld	ENSMUST00000149042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110333	Gm45861	ENSMUST00000209669	ENSMUSP00000147714	TRANSLATION	protein_coding,RT	-	-	5	1923	0	4.4	0	157	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000110333	Gm45861	ENSMUST00000210427	ENSMUSP00000147760	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	1629	0	4.82	0	86.8	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000052557	Gan	ENSMUST00000064488	ENSMUSP00000070168	TRANSLATION	protein_coding	-	CCDS40490.1	1	597	0	8.44	9.6	284.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000052557	Gan	ENSMUST00000162997	ENSMUSP00000124904	TRANSLATION	protein_coding	start	-	1	597	0	8.44	7.6	284.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044287	Nrn1l	ENSMUST00000060167	ENSMUSP00000056940	TRANSLATION	protein_coding	-	CCDS22618.1	1	162	0	0	0.5	87.9	0	1,-3	-	-	6	PRINCIPAL:3
ENSMUSG00000044287	Nrn1l	ENSMUST00000118920	ENSMUSP00000113445	TRANSLATION	protein_coding	-	CCDS80924.1	1	161	0	0	0.5	87.9	0	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000034105	Meak7	ENSMUST00000049156	ENSMUSP00000044430	TRANSLATION	protein_coding	-	CCDS40494.1	1	455	0	1.38	0.5	125.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034105	Meak7	ENSMUST00000212501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034105	Meak7	ENSMUST00000212534	ENSMUSP00000148691	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051495	Irf2bp2	ENSMUST00000054960	ENSMUSP00000062753	TRANSLATION	protein_coding	-	CCDS52711.1	2	570	8	0.8	1.5	118	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000074434	Defa28	ENSMUST00000098887	ENSMUSP00000096486	TRANSLATION	protein_coding	-	CCDS52511.1	5	94	0	0	0.5	107.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031613	Hpgd	ENSMUST00000034026	ENSMUSP00000034026	TRANSLATION	protein_coding	-	CCDS40341.1	1	269	27	6.75	1.5	194.7	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005699	Pard6a	ENSMUST00000212972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005699	Pard6a	ENSMUST00000212352	ENSMUSP00000148508	TRANSLATION	protein_coding	-	-	2	329	0	3	0.5	76.5	0	-4,-1	-	-	10.326	MINOR
ENSMUSG00000005699	Pard6a	ENSMUST00000211888	ENSMUSP00000148821	TRANSLATION	protein_coding	-	CCDS85600.1	1	316	0	2.6	0.5	39.7	0	-4,-2	-	-	6.87	MINOR
ENSMUSG00000005699	Pard6a	ENSMUST00000098444	ENSMUSP00000096043	TRANSLATION	protein_coding	-	CCDS40462.1	2	330	0	3	0.5	76.5	0	-4,-1	-	-	10.326	MINOR
ENSMUSG00000005699	Pard6a	ENSMUST00000212430	ENSMUSP00000148603	TRANSLATION	protein_coding	-	CCDS85601.1	1	345	0	3.6	6.3	83.1	0	-4,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000005699	Pard6a	ENSMUST00000212634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005699	Pard6a	ENSMUST00000093195	ENSMUSP00000090886	TRANSLATION	protein_coding	-	CCDS22609.1	1	346	0	3.6	6.3	83.1	0	-4,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000055835	Zfp1	ENSMUST00000211926	ENSMUSP00000148310	TRANSLATION	protein_coding	-	CCDS85614.1	1	389	32	1.6	0.5	247.2	0	-4,-5	-	-	14.982	MINOR
ENSMUSG00000055835	Zfp1	ENSMUST00000077791	ENSMUSP00000076964	TRANSLATION	protein_coding	-	CCDS22678.1	1	403	32	2	1.5	277.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055835	Zfp1	ENSMUST00000212072	ENSMUSP00000148511	TRANSLATION	protein_coding	-	-	1	370	32	1.1	1.5	191.8	0	-4,-5	-	-	10.158	MINOR
ENSMUSG00000055835	Zfp1	ENSMUST00000212206	ENSMUSP00000148472	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	1.4	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031633	Slc25a4	ENSMUST00000155986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031633	Slc25a4	ENSMUST00000034049	ENSMUSP00000034049	TRANSLATION	protein_coding	-	CCDS40333.1	1	298	21	4	21.5	231	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000058052	Defb35	ENSMUST00000076786	ENSMUSP00000076067	TRANSLATION	protein_coding	-	CCDS52516.1	1	63	0	0	0.5	25.1	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000074446	Defa23	ENSMUST00000098899	ENSMUSP00000096498	TRANSLATION	protein_coding	-	CCDS40265.1	1	93	0	0	1.5	122	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000003037	Rab8a	ENSMUST00000135613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003037	Rab8a	ENSMUST00000003121	ENSMUSP00000003121	TRANSLATION	protein_coding	-	CCDS22409.1	1	207	23	6.5	19.5	223.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000003037	Rab8a	ENSMUST00000128203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074491	Clec4g	ENSMUST00000062037	ENSMUSP00000059574	TRANSLATION	protein_coding	-	CCDS22072.1	1	294	7	3.3	0.5	64.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000074491	Clec4g	ENSMUST00000159612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074491	Clec4g	ENSMUST00000160527	ENSMUSP00000124493	TRANSLATION	nonsense_mediated_decay	start	-	1	99	0	1.78	0	41.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074491	Clec4g	ENSMUST00000058040	ENSMUSP00000136805	TRANSLATION	protein_coding	-	-	5	130	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051978	Erich1	ENSMUST00000211242	ENSMUSP00000147614	TRANSLATION	protein_coding	stop	-	3	135	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051978	Erich1	ENSMUST00000110813	ENSMUSP00000106436	TRANSLATION	protein_coding	-	CCDS40238.1	1	332	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000079112	Fam90a1a	ENSMUST00000110741	ENSMUSP00000106369	TRANSLATION	protein_coding	-	CCDS52517.1	1	429	2	0	0.5	66.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037022	Mmaa	ENSMUST00000048718	ENSMUSP00000048826	TRANSLATION	protein_coding	-	CCDS22436.1	1	415	14	6	1.5	0	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037022	Mmaa	ENSMUST00000210231	ENSMUSP00000147987	TRANSLATION	nonsense_mediated_decay	-	-	1	155	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000014907	Naf1	ENSMUST00000118009	ENSMUSP00000112640	TRANSLATION	protein_coding	-	CCDS52562.1	1	597	0	2.75	0.5	151.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014907	Naf1	ENSMUST00000212916	ENSMUSP00000148293	TRANSLATION	nonsense_mediated_decay	start	-	5	122	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031601	Cnot7	ENSMUST00000034012	ENSMUSP00000034012	TRANSLATION	protein_coding	-	CCDS22253.1	1	285	3	6	19.5	77.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031601	Cnot7	ENSMUST00000144970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031601	Cnot7	ENSMUST00000132032	ENSMUSP00000122933	TRANSLATION	protein_coding	-	CCDS22253.1	1	285	3	6	19.5	77.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031601	Cnot7	ENSMUST00000146280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031601	Cnot7	ENSMUST00000128237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031601	Cnot7	ENSMUST00000149992	ENSMUSP00000117304	TRANSLATION	protein_coding	-	CCDS22253.1	1	285	3	6	19.5	77.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031601	Cnot7	ENSMUST00000132200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031601	Cnot7	ENSMUST00000142455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031601	Cnot7	ENSMUST00000139558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031601	Cnot7	ENSMUST00000135269	ENSMUSP00000119319	TRANSLATION	protein_coding	-	CCDS72114.1	1	248	2	5	0.5	68.2	0	-4,-5	-	-	11.277	MINOR
ENSMUSG00000031601	Cnot7	ENSMUST00000132740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046556	Zfp319	ENSMUST00000057717	ENSMUSP00000053397	TRANSLATION	protein_coding	-	CCDS22559.1	1	581	56	0.2	5.1	222.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000047286	Olfr370	ENSMUST00000209408	ENSMUSP00000147834	TRANSLATION	protein_coding	-	CCDS22454.1	3	314	0	0	2.7	149	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047286	Olfr370	ENSMUST00000214156	ENSMUSP00000149251	TRANSLATION	protein_coding	-	CCDS22454.1	5	314	0	0	2.7	149	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047286	Olfr370	ENSMUST00000058609	ENSMUSP00000055435	TRANSLATION	protein_coding	-	CCDS22454.1	-	314	0	0	2.7	149	7	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023073	Slc10a2	ENSMUST00000023835	ENSMUSP00000023835	TRANSLATION	protein_coding	-	CCDS22089.1	1	348	0	2.44	3.9	153.1	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000031672	Got2	ENSMUST00000212861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031672	Got2	ENSMUST00000211836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031672	Got2	ENSMUST00000034097	ENSMUSP00000034097	TRANSLATION	protein_coding	-	CCDS22568.1	1	430	15	8.75	11	321.5	0	0,3	-	-	21	PRINCIPAL:1
ENSMUSG00000031672	Got2	ENSMUST00000147040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031872	Bean1	ENSMUST00000212979	ENSMUSP00000148571	TRANSLATION	protein_coding	-	CCDS52645.1	5	326	0	0	0.5	0	2	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031872	Bean1	ENSMUST00000164076	ENSMUSP00000132056	TRANSLATION	protein_coding	-	CCDS52647.1	1	194	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000031872	Bean1	ENSMUST00000213077	ENSMUSP00000148283	TRANSLATION	protein_coding	-	-	3	150	0	0	1.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031872	Bean1	ENSMUST00000093245	ENSMUSP00000090931	TRANSLATION	protein_coding	-	CCDS52646.1	1	255	0	0	1.5	0	2	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000031872	Bean1	ENSMUST00000171018	ENSMUSP00000129403	TRANSLATION	protein_coding	-	CCDS52645.1	1	326	0	0	0.5	0	2	-4,-5	-	-	0	PRINCIPAL:4
ENSMUSG00000031872	Bean1	ENSMUST00000167633	ENSMUSP00000131530	TRANSLATION	protein_coding	-	CCDS52646.1	5	255	0	0	1.5	0	2	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000031948	Kars	ENSMUST00000211978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031948	Kars	ENSMUST00000211990	ENSMUSP00000148790	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031948	Kars	ENSMUST00000034426	ENSMUSP00000034426	TRANSLATION	protein_coding	-	CCDS40481.1	1	595	21	11.5	1.7	325	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031948	Kars	ENSMUST00000164470	ENSMUSP00000126268	TRANSLATION	protein_coding	-	CCDS52677.1	1	624	21	11.5	1.7	325	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000031948	Kars	ENSMUST00000212693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031948	Kars	ENSMUST00000093120	ENSMUSP00000090808	TRANSLATION	protein_coding	-	CCDS52677.1	1	624	21	11.5	1.7	325	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000084128	Esrp2	ENSMUST00000139319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000150527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000142050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000084128	Esrp2	ENSMUST00000125955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000146940	ENSMUSP00000123114	TRANSLATION	protein_coding	stop	-	1	592	0	5.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000084128	Esrp2	ENSMUST00000131020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000155164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000139559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084128	Esrp2	ENSMUST00000115979	ENSMUSP00000111639	TRANSLATION	protein_coding	-	CCDS22629.1	1	717	0	5.3	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043903	Zfp469	ENSMUST00000187142	ENSMUSP00000158621	TRANSLATION	protein_coding	-	-	-	3765	19	0	0.5	18.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043903	Zfp469	ENSMUST00000055537	ENSMUSP00000158742	TRANSLATION	protein_coding	start	-	-	597	12	0	0	18.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037300	Ttc13	ENSMUST00000118134	ENSMUSP00000113383	TRANSLATION	protein_coding	-	-	5	792	0	5.01	1.5	75.1	0	2,-2	-	-	9.552	MINOR
ENSMUSG00000037300	Ttc13	ENSMUST00000215563	ENSMUSP00000149994	TRANSLATION	protein_coding	start/stop	-	1	68	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037300	Ttc13	ENSMUST00000140350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000131633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000130344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000041614	ENSMUSP00000038484	TRANSLATION	protein_coding	-	-	2	759	0	3.28	0.5	33.6	0	2,-2	-	-	2.85	MINOR
ENSMUSG00000037300	Ttc13	ENSMUST00000117624	ENSMUSP00000114043	TRANSLATION	protein_coding	-	-	5	738	0	3.88	0	33.6	0	2,-2	-	-	4.05	MINOR
ENSMUSG00000037300	Ttc13	ENSMUST00000128390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000126674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000214828	ENSMUSP00000149848	TRANSLATION	protein_coding	-	-	5	844	0	6.17	1.5	76.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037300	Ttc13	ENSMUST00000127167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037300	Ttc13	ENSMUST00000231984	ENSMUSP00000156040	TRANSLATION	protein_coding	-	-	-	715	0	3.28	0.5	33.6	0	2,-2	-	-	2.85	MINOR
ENSMUSG00000031538	Plat	ENSMUST00000210960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031538	Plat	ENSMUST00000211033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031538	Plat	ENSMUST00000033941	ENSMUSP00000033941	TRANSLATION	protein_coding	-	CCDS22183.1	1	559	7	10.13	0.5	455.5	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031617	Tmem184c	ENSMUST00000034030	ENSMUSP00000034030	TRANSLATION	protein_coding	-	CCDS22426.1	1	622	0	0	0.5	337.8	5	0,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031617	Tmem184c	ENSMUST00000152168	ENSMUSP00000114463	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	167.6	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000031617	Tmem184c	ENSMUST00000141202	ENSMUSP00000120041	TRANSLATION	protein_coding	stop	-	5	100	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031740	Mmp2	ENSMUST00000034187	ENSMUSP00000034187	TRANSLATION	protein_coding	-	CCDS22523.1	1	662	30	13	6.3	602.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000031740	Mmp2	ENSMUST00000211567	ENSMUSP00000147838	TRANSLATION	protein_coding	start	-	5	126	2	3	0	113.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031740	Mmp2	ENSMUST00000211691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031740	Mmp2	ENSMUST00000211308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006585	Cdt1	ENSMUST00000212821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006585	Cdt1	ENSMUST00000212053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006585	Cdt1	ENSMUST00000212967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006585	Cdt1	ENSMUST00000212201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006585	Cdt1	ENSMUST00000006760	ENSMUSP00000006760	TRANSLATION	protein_coding	-	CCDS22741.1	1	557	0	8.9	1.5	300.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031881	Cdh16	ENSMUST00000212420	ENSMUSP00000148711	TRANSLATION	protein_coding	start	-	5	142	6	1.68	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000211903	ENSMUSP00000148478	TRANSLATION	protein_coding	-	CCDS22583.1	1	830	35	12.39	2.7	172.1	2	1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000031881	Cdh16	ENSMUST00000213033	ENSMUSP00000148701	TRANSLATION	protein_coding	start	-	5	179	3	0.88	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000163783	ENSMUSP00000129663	TRANSLATION	protein_coding	-	CCDS85594.1	1	800	33	11.79	0.5	172.1	2	-1,-3	-	-	15.468	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000211849	ENSMUSP00000148269	TRANSLATION	protein_coding	start	-	3	75	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212045	ENSMUSP00000148602	TRANSLATION	protein_coding	start	-	3	149	0	2.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212324	ENSMUSP00000148363	TRANSLATION	protein_coding	stop	-	5	141	4	2	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212662	ENSMUSP00000148793	TRANSLATION	protein_coding	stop	-	3	163	10	3.2	0	31	0	1,-2	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212748	ENSMUSP00000148809	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0.3	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031881	Cdh16	ENSMUST00000212882	ENSMUSP00000148726	TRANSLATION	protein_coding	-	CCDS85595.1	1	815	35	12.39	0.5	172.1	0	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000031881	Cdh16	ENSMUST00000212318	ENSMUSP00000148337	TRANSLATION	protein_coding	start	-	5	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000212447	ENSMUSP00000148835	TRANSLATION	protein_coding	stop	-	5	223	10	3.4	0	31	0	1,-2	-	-	-1	MINOR
ENSMUSG00000031881	Cdh16	ENSMUST00000211889	ENSMUSP00000148491	TRANSLATION	protein_coding	start	-	5	93	0	1.36	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000002885	Adgre5	ENSMUST00000139797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002885	Adgre5	ENSMUST00000140606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002885	Adgre5	ENSMUST00000149368	ENSMUSP00000138393	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000002885	Adgre5	ENSMUST00000075843	ENSMUSP00000075240	TRANSLATION	protein_coding	-	CCDS22461.1	1	818	18	6.12	0.5	410.6	9	2,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000002885	Adgre5	ENSMUST00000166939	ENSMUSP00000128220	TRANSLATION	protein_coding	-	CCDS52612.1	1	722	13	4.96	0.5	356.2	9	2,-2	-	-	9.078	MINOR
ENSMUSG00000002885	Adgre5	ENSMUST00000109802	ENSMUSP00000105427	TRANSLATION	protein_coding	-	CCDS52611.1	5	773	17	5.96	0.5	410.6	9	2,-2	-	-	17.016	ALTERNATIVE:2
ENSMUSG00000002885	Adgre5	ENSMUST00000002964	ENSMUSP00000002964	TRANSLATION	protein_coding	-	CCDS52610.1	1	724	13	4.96	0.5	356.2	9	2,-2	-	-	9.078	MINOR
ENSMUSG00000002885	Adgre5	ENSMUST00000154075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046718	Bst2	ENSMUST00000051672	ENSMUSP00000051921	TRANSLATION	protein_coding	-	CCDS22397.1	1	172	0	3.05	0.5	116	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000046718	Bst2	ENSMUST00000212386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049988	Lrrc25	ENSMUST00000052437	ENSMUSP00000049686	TRANSLATION	protein_coding	-	CCDS22375.1	1	297	0	0	0.5	27.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000049988	Lrrc25	ENSMUST00000210609	ENSMUSP00000147438	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000085795	Zfp703	ENSMUST00000127097	ENSMUSP00000132801	TRANSLATION	protein_coding	-	CCDS52531.1	2	127	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000085795	Zfp703	ENSMUST00000209610	ENSMUSP00000148264	TRANSLATION	nonsense_mediated_decay	-	-	2	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000085795	Zfp703	ENSMUST00000154256	ENSMUSP00000128757	TRANSLATION	protein_coding	-	CCDS52532.1	1	594	4	0	0.5	74.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000085795	Zfp703	ENSMUST00000209411	ENSMUSP00000148203	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015023	Ddx19a	ENSMUST00000173183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015023	Ddx19a	ENSMUST00000040416	ENSMUSP00000047898	TRANSLATION	protein_coding	-	CCDS22668.1	1	478	15	9.9	7.5	192.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015023	Ddx19a	ENSMUST00000130133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031671	Setd6	ENSMUST00000034096	ENSMUSP00000034096	TRANSLATION	protein_coding	-	CCDS22566.1	1	473	14	7.75	1.5	128.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000031671	Setd6	ENSMUST00000148727	ENSMUSP00000148785	TRANSLATION	protein_coding	start/stop	-	1	128	5	1.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031671	Setd6	ENSMUST00000141900	ENSMUSP00000148466	TRANSLATION	nonsense_mediated_decay	start	-	1	67	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031671	Setd6	ENSMUST00000154052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031671	Setd6	ENSMUST00000126888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031671	Setd6	ENSMUST00000154593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019278	Dpep1	ENSMUST00000212773	ENSMUSP00000148609	TRANSLATION	protein_coding	stop	-	3	187	4	4.3	0	152.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000019278	Dpep1	ENSMUST00000019422	ENSMUSP00000019422	TRANSLATION	protein_coding	-	CCDS22750.1	1	410	7	8.93	2.7	398	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000019278	Dpep1	ENSMUST00000212409	ENSMUSP00000148823	TRANSLATION	protein_coding	stop	-	3	284	6	6.38	0	301.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000184103	ENSMUSP00000139246	TRANSLATION	protein_coding	start	-	3	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000093268	ENSMUSP00000090956	TRANSLATION	protein_coding	-	CCDS52641.1	1	326	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000120044	ENSMUSP00000113750	TRANSLATION	protein_coding	-	-	5	866	15	7.15	0.5	60.9	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031789	Cngb1	ENSMUST00000133716	ENSMUSP00000148564	TRANSLATION	nonsense_mediated_decay	-	-	5	193	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000134207	ENSMUSP00000148391	TRANSLATION	nonsense_mediated_decay	-	-	5	228	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000121162	ENSMUSP00000112437	TRANSLATION	protein_coding	-	-	5	866	15	7.15	0.5	60.9	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031789	Cngb1	ENSMUST00000119870	ENSMUSP00000113827	TRANSLATION	protein_coding	-	CCDS72151.1	1	1325	15	7.15	0.5	60.9	1	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000031789	Cngb1	ENSMUST00000184621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031789	Cngb1	ENSMUST00000156514	ENSMUSP00000148290	TRANSLATION	nonsense_mediated_decay	-	-	1	227	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031789	Cngb1	ENSMUST00000212237	ENSMUSP00000148367	TRANSLATION	protein_coding	start	-	5	207	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031594	Fgl1	ENSMUST00000034003	ENSMUSP00000034003	TRANSLATION	protein_coding	-	CCDS22260.1	1	314	6	4.99	6.5	270.1	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000031594	Fgl1	ENSMUST00000134510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038173	Enpp6	ENSMUST00000039840	ENSMUSP00000044608	TRANSLATION	protein_coding	-	CCDS40335.1	1	440	12	8.5	1.5	262.9	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038173	Enpp6	ENSMUST00000123066	ENSMUSP00000147811	TRANSLATION	nonsense_mediated_decay	-	-	2	232	9	4.066	0	170.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000038173	Enpp6	ENSMUST00000210466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038173	Enpp6	ENSMUST00000140149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038173	Enpp6	ENSMUST00000119686	ENSMUSP00000112633	TRANSLATION	protein_coding	-	-	1	390	12	7.5	0	262.9	0	2,-2	-	-	16.002	MINOR
ENSMUSG00000038173	Enpp6	ENSMUST00000149593	ENSMUSP00000121470	TRANSLATION	protein_coding	start	-	1	75	1	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047390	Defb9	ENSMUST00000057076	ENSMUSP00000054085	TRANSLATION	protein_coding	-	CCDS40286.1	1	67	0	0	0.5	43.1	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000034845	Plvap	ENSMUST00000048452	ENSMUSP00000035404	TRANSLATION	protein_coding	-	CCDS22396.1	1	438	0	0	1.5	757.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031548	Sfrp1	ENSMUST00000033952	ENSMUSP00000033952	TRANSLATION	protein_coding	-	CCDS22191.1	1	314	0	0.6	2.9	153	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000109061	Gm49320	ENSMUST00000145165	ENSMUSP00000117418	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	535	20	8.6	0	190.6	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000031916	Cog8	ENSMUST00000134772	ENSMUSP00000137677	TRANSLATION	nonsense_mediated_decay	start	-	3	99	0	0	0	80.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031916	Cog8	ENSMUST00000122903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031916	Cog8	ENSMUST00000034391	ENSMUSP00000034391	TRANSLATION	protein_coding	-	CCDS22643.1	1	640	0	0	0.5	490.4	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000031916	Cog8	ENSMUST00000095517	ENSMUSP00000093173	TRANSLATION	protein_coding	-	CCDS22643.1	1	640	0	0	0.5	490.4	0	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000025316	Banp	ENSMUST00000170857	ENSMUSP00000132095	TRANSLATION	protein_coding	-	CCDS40502.1	1	548	0	0	1.5	32.2	0	-4,-5	-	-	6.188	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000174445	ENSMUSP00000134513	TRANSLATION	nonsense_mediated_decay	-	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000026354	ENSMUSP00000026354	TRANSLATION	protein_coding	-	CCDS72176.1	1	509	0	0	1.5	32.2	0	-4,-5	-	-	6.188	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000173753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025316	Banp	ENSMUST00000172628	ENSMUSP00000133342	TRANSLATION	protein_coding	stop	-	5	265	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000093078	ENSMUSP00000090766	TRANSLATION	protein_coding	-	CCDS72177.1	1	506	0	0	1.5	32.2	0	-4,-5	-	-	6.188	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000173925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025316	Banp	ENSMUST00000172511	ENSMUSP00000133365	TRANSLATION	protein_coding	stop	-	5	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000172513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025316	Banp	ENSMUST00000173254	ENSMUSP00000133783	TRANSLATION	protein_coding	-	-	5	506	0	0	6.3	32.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000025316	Banp	ENSMUST00000174753	ENSMUSP00000134058	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000172681	ENSMUSP00000134336	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025316	Banp	ENSMUST00000173396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025316	Banp	ENSMUST00000173201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025316	Banp	ENSMUST00000174327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025316	Banp	ENSMUST00000167711	ENSMUSP00000132434	TRANSLATION	protein_coding	start	-	5	321	0	0	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031453	Rasa3	ENSMUST00000117551	ENSMUSP00000112998	TRANSLATION	protein_coding	-	CCDS40234.1	1	834	18	10.275	13.7	333.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031453	Rasa3	ENSMUST00000154454	ENSMUSP00000122968	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031453	Rasa3	ENSMUST00000132439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031453	Rasa3	ENSMUST00000132637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031453	Rasa3	ENSMUST00000137822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031453	Rasa3	ENSMUST00000127418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031489	Adrb3	ENSMUST00000117565	ENSMUSP00000113732	TRANSLATION	protein_coding	-	-	1	404	0	0.8	0.5	231.4	7	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031489	Adrb3	ENSMUST00000211346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031489	Adrb3	ENSMUST00000209447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031489	Adrb3	ENSMUST00000121838	ENSMUSP00000113006	TRANSLATION	protein_coding	-	CCDS22213.1	1	400	0	0.8	1.5	231.4	7	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000031489	Adrb3	ENSMUST00000081438	ENSMUSP00000080162	TRANSLATION	protein_coding	-	CCDS22213.1	1	400	0	0.8	1.5	231.4	7	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000054823	Nsd3	ENSMUST00000142395	ENSMUSP00000117778	TRANSLATION	protein_coding	-	CCDS52528.1	5	1446	40	11.07	1.5	222.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054823	Nsd3	ENSMUST00000139966	ENSMUSP00000122096	TRANSLATION	protein_coding	-	-	5	1397	40	11.07	1.5	222.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000054823	Nsd3	ENSMUST00000143445	ENSMUSP00000147926	TRANSLATION	protein_coding	-	-	1	542	0	1.24	0	77.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054823	Nsd3	ENSMUST00000141781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054823	Nsd3	ENSMUST00000146919	ENSMUSP00000115470	TRANSLATION	protein_coding	-	CCDS40305.1	1	655	0	1.24	1.5	77.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054823	Nsd3	ENSMUST00000129959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054823	Nsd3	ENSMUST00000155861	ENSMUSP00000117596	TRANSLATION	protein_coding	-	CCDS40305.1	1	655	0	1.24	1.5	77.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054823	Nsd3	ENSMUST00000084026	ENSMUSP00000081040	TRANSLATION	protein_coding	-	CCDS52528.1	2	1446	40	11.07	1.5	222.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054823	Nsd3	ENSMUST00000136107	ENSMUSP00000147840	TRANSLATION	protein_coding	-	CCDS85518.1	1	621	0	1.24	0.5	77.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054823	Nsd3	ENSMUST00000153597	ENSMUSP00000123028	TRANSLATION	protein_coding	-	-	1	484	26	8.75	0	143.1	0	-4,-5	-	-	2.586	MINOR
ENSMUSG00000054823	Nsd3	ENSMUST00000147935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078953	Gm11020	ENSMUST00000109447	ENSMUSP00000105073	TRANSLATION	protein_coding	start	-	5	61	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000031851	Ntpcr	ENSMUST00000065135	ENSMUSP00000069384	TRANSLATION	protein_coding	-	CCDS80944.1	1	121	7	2.65	0.5	129.8	0	-4,-7	-	-	9.132	MINOR
ENSMUSG00000031851	Ntpcr	ENSMUST00000152189	ENSMUSP00000115996	TRANSLATION	protein_coding	-	-	3	186	6	3.75	0	203.7	0	-4,-7	-	-	14.904	MINOR
ENSMUSG00000031851	Ntpcr	ENSMUST00000143504	ENSMUSP00000121271	TRANSLATION	protein_coding	-	-	5	153	0	1.75	0	85.7	0	-4,-7	-	-	1.002	MINOR
ENSMUSG00000031851	Ntpcr	ENSMUST00000034313	ENSMUSP00000034313	TRANSLATION	protein_coding	-	CCDS22781.1	1	190	7	4.25	6.3	224.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000031851	Ntpcr	ENSMUST00000123554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031851	Ntpcr	ENSMUST00000151172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031851	Ntpcr	ENSMUST00000146055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031851	Ntpcr	ENSMUST00000138656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051906	Cd209f	ENSMUST00000138439	ENSMUSP00000119810	TRANSLATION	protein_coding	-	-	1	274	16	3.76	0	73.8	2	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000051906	Cd209f	ENSMUST00000128568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051906	Cd209f	ENSMUST00000156276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051906	Cd209f	ENSMUST00000207294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051906	Cd209f	ENSMUST00000145007	ENSMUSP00000116355	TRANSLATION	protein_coding	-	CCDS52472.1	1	255	16	3.55	0.5	73.8	2	-4,-6	-	-	17.58	PRINCIPAL:2
ENSMUSG00000035151	Elmod2	ENSMUST00000141565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035151	Elmod2	ENSMUST00000139041	ENSMUSP00000147732	TRANSLATION	protein_coding	stop	-	3	189	0	0	0	103.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035151	Elmod2	ENSMUST00000126079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035151	Elmod2	ENSMUST00000053902	ENSMUSP00000052287	TRANSLATION	protein_coding	-	CCDS22450.1	1	293	0	0	6.3	175.8	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000035151	Elmod2	ENSMUST00000150124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035151	Elmod2	ENSMUST00000177594	ENSMUSP00000137044	TRANSLATION	protein_coding	-	CCDS22450.1	1	293	0	0	6.3	175.8	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000087408	Cers1	ENSMUST00000136257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087408	Cers1	ENSMUST00000140239	ENSMUSP00000120598	TRANSLATION	protein_coding	-	CCDS52570.1	1	350	0	0	1.5	115.6	0	-4,-6	-	-	6	MINOR
ENSMUSG00000087408	Cers1	ENSMUST00000165819	ENSMUSP00000128325	TRANSLATION	protein_coding	-	CCDS52571.1	1	357	0	0.6	1.5	100	0	2,-3	-	-	11.064	PRINCIPAL:1
ENSMUSG00000031819	Emc8	ENSMUST00000180417	ENSMUSP00000137767	TRANSLATION	nonsense_mediated_decay	-	-	1	167	0	0	0	124.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031819	Emc8	ENSMUST00000034277	ENSMUSP00000034277	TRANSLATION	protein_coding	-	CCDS22719.1	1	207	0	0	8.8	219.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031819	Emc8	ENSMUST00000180909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031819	Emc8	ENSMUST00000181836	ENSMUSP00000137932	TRANSLATION	protein_coding	start	-	3	143	0	0	0	81.9	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000031819	Emc8	ENSMUST00000181111	ENSMUSP00000138068	TRANSLATION	protein_coding	start	-	5	128	0	0	0	111.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031819	Emc8	ENSMUST00000181334	ENSMUSP00000137850	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	125.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031819	Emc8	ENSMUST00000181950	ENSMUSP00000137970	TRANSLATION	protein_coding	-	-	2	77	0	0	0	85.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031819	Emc8	ENSMUST00000181402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031754	Nudt21	ENSMUST00000212911	ENSMUSP00000148500	TRANSLATION	protein_coding	start	-	3	129	0	2.75	0	141.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031754	Nudt21	ENSMUST00000212622	ENSMUSP00000148485	TRANSLATION	protein_coding	start	-	3	169	0	3.5	0	174	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031754	Nudt21	ENSMUST00000034204	ENSMUSP00000034204	TRANSLATION	protein_coding	-	CCDS40433.1	1	227	0	6.58	20.3	270.6	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000031754	Nudt21	ENSMUST00000212981	ENSMUSP00000148597	TRANSLATION	protein_coding	-	-	3	218	0	5.58	0	265.1	0	-4,0	-	-	9.672	MINOR
ENSMUSG00000015994	Fnta	ENSMUST00000016138	ENSMUSP00000016138	TRANSLATION	protein_coding	-	CCDS22205.1	1	377	5	8.5	3.9	173.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015994	Fnta	ENSMUST00000209860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015994	Fnta	ENSMUST00000211718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015994	Fnta	ENSMUST00000209664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015994	Fnta	ENSMUST00000209247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000118395	ENSMUSP00000113125	TRANSLATION	protein_coding	-	-	1	481	0	0	0	341.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032815	Fanca	ENSMUST00000127904	ENSMUSP00000116614	TRANSLATION	protein_coding	start	-	1	771	0	0	0	475.7	0	-3,0	-	-	-1	MINOR
ENSMUSG00000032815	Fanca	ENSMUST00000146687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000155488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000135702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032815	Fanca	ENSMUST00000133950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000155279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032815	Fanca	ENSMUST00000212953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032815	Fanca	ENSMUST00000211934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000150318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032815	Fanca	ENSMUST00000213090	ENSMUSP00000148306	TRANSLATION	protein_coding	start	-	5	169	0	0	0	44.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000032815	Fanca	ENSMUST00000155510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032815	Fanca	ENSMUST00000126834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032815	Fanca	ENSMUST00000035495	ENSMUSP00000045217	TRANSLATION	protein_coding	-	CCDS22753.1	1	1439	0	0	0.5	584.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000005705	Agrp	ENSMUST00000005849	ENSMUSP00000005849	TRANSLATION	protein_coding	-	CCDS22605.1	1	131	0	1.5	6.3	116.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000005705	Agrp	ENSMUST00000194091	ENSMUSP00000142044	TRANSLATION	protein_coding	-	CCDS22605.1	2	131	0	1.5	6.3	116.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000005705	Agrp	ENSMUST00000194654	ENSMUSP00000141783	TRANSLATION	protein_coding	stop	-	2	118	0	1	0	109.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000054320	Lrrc36	ENSMUST00000216765	ENSMUSP00000149382	TRANSLATION	protein_coding	-	-	5	709	0	2.75	0	28.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000054320	Lrrc36	ENSMUST00000109355	ENSMUSP00000104979	TRANSLATION	protein_coding	-	CCDS52658.1	5	757	0	2.75	1.5	28.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000054320	Lrrc36	ENSMUST00000216457	ENSMUSP00000148889	TRANSLATION	nonsense_mediated_decay	start	-	1	271	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054320	Lrrc36	ENSMUST00000067305	ENSMUSP00000066345	TRANSLATION	protein_coding	-	CCDS22601.1	1	634	0	1	0.5	0	0	-4,-7	-	-	2.184	MINOR
ENSMUSG00000054320	Lrrc36	ENSMUST00000213547	ENSMUSP00000150103	TRANSLATION	protein_coding	-	-	5	755	0	2.75	1.5	28.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000054320	Lrrc36	ENSMUST00000139900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040396	Abhd13	ENSMUST00000139793	ENSMUSP00000116130	TRANSLATION	protein_coding	-	CCDS40217.1	2	337	7	0.24	17	37.3	1	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000040396	Abhd13	ENSMUST00000048216	ENSMUSP00000036730	TRANSLATION	protein_coding	-	CCDS40217.1	1	337	7	0.24	17	37.3	1	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031864	Ints10	ENSMUST00000140309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031864	Ints10	ENSMUST00000146322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031864	Ints10	ENSMUST00000110242	ENSMUSP00000105871	TRANSLATION	protein_coding	-	CCDS80885.1	1	736	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031864	Ints10	ENSMUST00000147072	ENSMUSP00000118390	TRANSLATION	protein_coding	start	-	3	179	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031864	Ints10	ENSMUST00000212064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031864	Ints10	ENSMUST00000110241	ENSMUSP00000105870	TRANSLATION	protein_coding	-	-	1	659	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031864	Ints10	ENSMUST00000034328	ENSMUSP00000034328	TRANSLATION	protein_coding	-	CCDS22342.1	1	710	0	0	13.5	0	0	-4,-5	-	-	4	PRINCIPAL:3
ENSMUSG00000031864	Ints10	ENSMUST00000070713	ENSMUSP00000069908	TRANSLATION	protein_coding	-	CCDS80886.1	1	736	0	0	12.5	0	0	-4,-5	-	-	3.68	ALTERNATIVE:1
ENSMUSG00000031864	Ints10	ENSMUST00000145140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005534	Insr	ENSMUST00000207100	ENSMUSP00000146818	TRANSLATION	protein_coding	start/stop	-	1	224	0	3.14	0	24.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005534	Insr	ENSMUST00000207295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005534	Insr	ENSMUST00000208839	ENSMUSP00000146651	TRANSLATION	nonsense_mediated_decay	start	-	3	90	0	2.1386	0	95.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005534	Insr	ENSMUST00000139504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005534	Insr	ENSMUST00000091291	ENSMUSP00000088837	TRANSLATION	protein_coding	-	CCDS22059.1	1	1372	22	20.63	0.5	668.9	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000102141	Gm3952	ENSMUST00000195093	ENSMUSP00000142011	TRANSLATION	protein_coding	start/stop	-	5	191	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096914	Galntl6	ENSMUST00000077447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096914	Galntl6	ENSMUST00000146513	ENSMUSP00000118306	TRANSLATION	nonsense_mediated_decay	-	-	2	51	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000096914	Galntl6	ENSMUST00000188531	ENSMUSP00000139677	TRANSLATION	protein_coding	start/stop	-	5	139	3	2.85	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096914	Galntl6	ENSMUST00000204067	ENSMUSP00000145016	TRANSLATION	protein_coding	-	-	1	66	0	1.33	0	36.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000096914	Galntl6	ENSMUST00000204128	ENSMUSP00000145321	TRANSLATION	protein_coding	-	CCDS22318.2	5	601	21	11.18	13.3	198	2	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000096914	Galntl6	ENSMUST00000098757	ENSMUSP00000096353	TRANSLATION	protein_coding	start	-	5	417	18	8.33	1.2	151.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096914	Galntl6	ENSMUST00000203398	ENSMUSP00000145298	TRANSLATION	protein_coding	stop	-	5	63	0	0.1	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000096914	Galntl6	ENSMUST00000125865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096914	Galntl6	ENSMUST00000204937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031657	Heatr3	ENSMUST00000137452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031657	Heatr3	ENSMUST00000131682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031657	Heatr3	ENSMUST00000121949	ENSMUSP00000112812	TRANSLATION	protein_coding	-	-	1	562	0	1.2	2.4	0	0	-3,-6	-	-	6.528	MINOR
ENSMUSG00000031657	Heatr3	ENSMUST00000034079	ENSMUSP00000034079	TRANSLATION	protein_coding	-	CCDS22508.1	1	679	0	1.2	6.3	36.2	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031657	Heatr3	ENSMUST00000146946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063049	Ing2	ENSMUST00000146625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063049	Ing2	ENSMUST00000080353	ENSMUSP00000079226	TRANSLATION	protein_coding	-	CCDS22298.1	1	281	8	1.2	8.8	92.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000063049	Ing2	ENSMUST00000125536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039057	Myo16	ENSMUST00000214643	ENSMUSP00000149384	TRANSLATION	protein_coding	stop	-	5	240	0	3.09	0	43.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039057	Myo16	ENSMUST00000208309	ENSMUSP00000147072	TRANSLATION	protein_coding	-	-	1	629	14	11.312	0	318.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000039057	Myo16	ENSMUST00000207477	ENSMUSP00000146677	TRANSLATION	protein_coding	-	CCDS40218.2	1	1919	14	19.385	0.5	1067.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000039057	Myo16	ENSMUST00000042103	ENSMUSP00000049345	TRANSLATION	protein_coding	-	-	5	1877	14	19.385	0	1067.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039057	Myo16	ENSMUST00000207204	ENSMUSP00000146796	TRANSLATION	protein_coding	-	-	1	1863	8	18.099	0	959.7	0	-4,-5	-	-	5.424	MINOR
ENSMUSG00000011306	Sugp1	ENSMUST00000011450	ENSMUSP00000011450	TRANSLATION	protein_coding	-	CCDS22356.1	1	643	0	3.8	1.5	155.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000011306	Sugp1	ENSMUST00000213035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011306	Sugp1	ENSMUST00000211808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034799	Unc13a	ENSMUST00000030170	ENSMUSP00000030170	TRANSLATION	protein_coding	-	CCDS22402.2	5	1712	14	27.61	1.7	526.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000034799	Unc13a	ENSMUST00000177032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034799	Unc13a	ENSMUST00000176777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034799	Unc13a	ENSMUST00000176127	ENSMUSP00000135578	TRANSLATION	protein_coding	start/stop	-	5	241	0	6.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034799	Unc13a	ENSMUST00000176426	ENSMUSP00000135032	TRANSLATION	protein_coding	start/stop	-	5	254	8	3	0	45	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034799	Unc13a	ENSMUST00000175909	ENSMUSP00000135528	TRANSLATION	nonsense_mediated_decay	start	-	5	17	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034799	Unc13a	ENSMUST00000177517	ENSMUSP00000135189	TRANSLATION	protein_coding	-	-	5	1731	14	27.61	2.7	526.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034799	Unc13a	ENSMUST00000175780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057788	Ddx49	ENSMUST00000008004	ENSMUSP00000008004	TRANSLATION	protein_coding	-	CCDS22364.1	1	480	14	9.28	1.5	256.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057788	Ddx49	ENSMUST00000144890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057788	Ddx49	ENSMUST00000127076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057788	Ddx49	ENSMUST00000127094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057788	Ddx49	ENSMUST00000138688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006567	Atp7b	ENSMUST00000110738	ENSMUSP00000106366	TRANSLATION	protein_coding	-	-	5	1347	6	16.08	0	376.1	6	-4,-6	-	-	16.398	MINOR
ENSMUSG00000006567	Atp7b	ENSMUST00000006742	ENSMUSP00000006742	TRANSLATION	protein_coding	-	CCDS22168.1	1	1462	6	16.88	0.5	376.1	6	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000009628	Tex15	ENSMUST00000009772	ENSMUSP00000009772	TRANSLATION	protein_coding	-	CCDS22232.1	1	2785	0	0	0.5	406.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000009628	Tex15	ENSMUST00000124501	ENSMUSP00000138070	TRANSLATION	nonsense_mediated_decay	-	-	1	323	0	0	0	157.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009628	Tex15	ENSMUST00000149399	ENSMUSP00000114474	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	35.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009628	Tex15	ENSMUST00000124496	ENSMUSP00000120744	TRANSLATION	protein_coding	stop	-	5	1279	0	0	0	157.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060208	Defa17	ENSMUST00000079528	ENSMUSP00000078485	TRANSLATION	protein_coding	-	CCDS52513.1	1	93	0	0	1.5	121.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031481	Tpte	ENSMUST00000077194	ENSMUSP00000076435	TRANSLATION	protein_coding	-	CCDS22173.1	1	664	10	11.97	0.5	113.3	3	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031481	Tpte	ENSMUST00000211747	ENSMUSP00000147872	TRANSLATION	nonsense_mediated_decay	-	-	1	591	10	9.66	0	26.6	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000031481	Tpte	ENSMUST00000211497	ENSMUSP00000147781	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031450	Grk1	ENSMUST00000033827	ENSMUSP00000033827	TRANSLATION	protein_coding	-	CCDS22112.1	1	564	16	6.75	3.9	285.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031450	Grk1	ENSMUST00000211027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031450	Grk1	ENSMUST00000209909	ENSMUSP00000147484	TRANSLATION	protein_coding	-	-	5	564	16	6.75	3.9	285.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031533	Mrps31	ENSMUST00000033934	ENSMUSP00000033934	TRANSLATION	protein_coding	-	CCDS22176.1	1	384	0	6.55	1.5	383.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031533	Mrps31	ENSMUST00000211083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031628	Casp3	ENSMUST00000093517	ENSMUSP00000091238	TRANSLATION	protein_coding	-	CCDS22294.1	1	277	4	5.5	8.8	184	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031628	Casp3	ENSMUST00000210534	ENSMUSP00000147700	TRANSLATION	protein_coding	-	-	5	133	0	3.2	0	31.4	0	-4,-5	-	-	1.398	MINOR
ENSMUSG00000031628	Casp3	ENSMUST00000209668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031628	Casp3	ENSMUST00000211115	ENSMUSP00000147767	TRANSLATION	protein_coding	-	CCDS22294.1	1	277	4	5.5	8.8	184	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025591	Tma16	ENSMUST00000143972	ENSMUSP00000148586	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	27.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025591	Tma16	ENSMUST00000145787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025591	Tma16	ENSMUST00000026681	ENSMUSP00000026681	TRANSLATION	protein_coding	-	CCDS40353.1	1	221	0	0	1.5	156.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025591	Tma16	ENSMUST00000213036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037492	Zmat4	ENSMUST00000135747	ENSMUSP00000121337	TRANSLATION	protein_coding	stop	-	3	68	4	1.75	0	26.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037492	Zmat4	ENSMUST00000207301	ENSMUSP00000146734	TRANSLATION	protein_coding	-	CCDS85514.1	1	160	11	2	0.5	88.2	0	-4,-7	-	-	9.57	MINOR
ENSMUSG00000037492	Zmat4	ENSMUST00000146774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037492	Zmat4	ENSMUST00000208021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037492	Zmat4	ENSMUST00000123412	ENSMUSP00000121626	TRANSLATION	nonsense_mediated_decay	-	-	2	225	15	4.08	0	115	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037492	Zmat4	ENSMUST00000042352	ENSMUSP00000049430	TRANSLATION	protein_coding	-	CCDS22192.1	1	229	15	4.08	11.5	115	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037492	Zmat4	ENSMUST00000131410	ENSMUSP00000115719	TRANSLATION	protein_coding	stop	-	3	96	7	2.83	0	53.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045248	Med26	ENSMUST00000058534	ENSMUSP00000058697	TRANSLATION	protein_coding	-	CCDS22416.1	1	588	0	1.5	1.5	593.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031760	Mt3	ENSMUST00000211930	ENSMUSP00000148345	TRANSLATION	protein_coding	-	-	2	80	7	0.981	0	41.5	0	-4,-5	-	-	12.264	MINOR
ENSMUSG00000031760	Mt3	ENSMUST00000211915	ENSMUSP00000148383	TRANSLATION	protein_coding	-	-	3	43	7	0.981	0	39.3	0	-4,-5	-	-	12.09	MINOR
ENSMUSG00000031760	Mt3	ENSMUST00000034211	ENSMUSP00000034211	TRANSLATION	protein_coding	-	CCDS40436.1	1	68	7	1.981	6.3	75.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040340	Tex45	ENSMUST00000047265	ENSMUSP00000043586	TRANSLATION	protein_coding	-	CCDS52467.1	5	500	0	0	1.5	778.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000040340	Tex45	ENSMUST00000159076	ENSMUSP00000123746	TRANSLATION	nonsense_mediated_decay	-	-	5	341	0	0	0	473.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040340	Tex45	ENSMUST00000161680	ENSMUSP00000124916	TRANSLATION	protein_coding	-	CCDS52467.1	5	500	0	0	1.5	778.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000003039	Fam32a	ENSMUST00000212117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003039	Fam32a	ENSMUST00000003123	ENSMUSP00000003123	TRANSLATION	protein_coding	-	CCDS52595.1	1	112	0	0	10.8	32.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000014778	Fhod1	ENSMUST00000134837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014778	Fhod1	ENSMUST00000132777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014778	Fhod1	ENSMUST00000014922	ENSMUSP00000014922	TRANSLATION	protein_coding	-	CCDS22600.1	1	1197	0	11.82	0.5	284.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014778	Fhod1	ENSMUST00000136439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000211510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031511	Arhgef7	ENSMUST00000210287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000211409	ENSMUSP00000148111	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	0.3	0	51.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000209686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000110909	ENSMUSP00000106534	TRANSLATION	protein_coding	-	CCDS52480.1	1	782	0	12.88	8.4	495	0	-4,-7	-	-	12.726	PRINCIPAL:1
ENSMUSG00000031511	Arhgef7	ENSMUST00000210012	ENSMUSP00000147641	TRANSLATION	protein_coding	stop	-	3	200	0	4.83	0	130.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000154204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000151225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000074856	ENSMUSP00000074399	TRANSLATION	protein_coding	-	CCDS22099.1	1	646	0	11.38	9.5	517.5	0	-4,-5	-	-	11.382	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000239427	ENSMUSP00000159352	TRANSLATION	protein_coding	stop	-	-	25	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000033908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031511	Arhgef7	ENSMUST00000210104	ENSMUSP00000148109	TRANSLATION	protein_coding	stop	-	3	131	0	2.7	0	56.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000098938	ENSMUSP00000096538	TRANSLATION	protein_coding	-	CCDS52481.1	1	705	0	11.38	11.7	517.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031511	Arhgef7	ENSMUST00000110904	ENSMUSP00000106529	TRANSLATION	protein_coding	start	-	1	636	0	11.38	0	450.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031683	Lsm6	ENSMUST00000126174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031683	Lsm6	ENSMUST00000051867	ENSMUSP00000049722	TRANSLATION	protein_coding	-	CCDS40396.1	1	80	5	2.33	21.5	70.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000031683	Lsm6	ENSMUST00000130325	ENSMUSP00000119841	TRANSLATION	protein_coding	-	CCDS40396.1	1	80	5	2.33	21.5	70.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000031683	Lsm6	ENSMUST00000146824	ENSMUSP00000148221	TRANSLATION	protein_coding	-	CCDS40396.1	2	80	5	2.33	21.5	70.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000031861	Lpar2	ENSMUST00000164890	ENSMUSP00000128261	TRANSLATION	protein_coding	-	CCDS40362.1	1	348	0	1.6	5.3	111.6	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031861	Lpar2	ENSMUST00000034325	ENSMUSP00000034325	TRANSLATION	protein_coding	-	CCDS40362.1	1	348	0	1.6	5.3	111.6	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031861	Lpar2	ENSMUST00000238452	ENSMUSP00000158853	TRANSLATION	protein_coding	-	-	-	249	0	1	0	81.5	6	-4,-7	-	-	7.944	MINOR
ENSMUSG00000074127	Cmtm2a	ENSMUST00000212487	ENSMUSP00000148812	TRANSLATION	non_stop_decay	stop	-	1	168	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000074127	Cmtm2a	ENSMUST00000034344	ENSMUSP00000034344	TRANSLATION	protein_coding	-	CCDS40451.1	1	169	0	0	1.5	0	4	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000074127	Cmtm2a	ENSMUST00000212492	ENSMUSP00000148378	TRANSLATION	protein_coding	-	-	3	166	0	0	0	0	2	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000031877	Ces2g	ENSMUST00000043183	ENSMUSP00000049315	TRANSLATION	protein_coding	-	CCDS22589.1	1	560	6	9.325	1.5	567.4	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031877	Ces2g	ENSMUST00000212330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110591	Gm31371	ENSMUST00000211848	ENSMUSP00000148655	TRANSLATION	protein_coding	start	-	5	265	0	2.75	0	89.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079120	AY761185	ENSMUST00000110758	ENSMUSP00000106386	TRANSLATION	protein_coding	-	CCDS40263.1	1	94	7	0	0.5	76.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037234	Hook3	ENSMUST00000152144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037234	Hook3	ENSMUST00000037182	ENSMUSP00000046788	TRANSLATION	protein_coding	-	CCDS22206.1	1	718	0	4.55	14.8	1052.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037234	Hook3	ENSMUST00000209542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037234	Hook3	ENSMUST00000209996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037234	Hook3	ENSMUST00000211777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037234	Hook3	ENSMUST00000210860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037234	Hook3	ENSMUST00000147613	ENSMUSP00000115008	TRANSLATION	protein_coding	start/stop	-	3	233	0	0	0	255.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037234	Hook3	ENSMUST00000211292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037234	Hook3	ENSMUST00000211683	ENSMUSP00000147595	TRANSLATION	protein_coding	start	-	3	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037234	Hook3	ENSMUST00000210172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031734	Irx3	ENSMUST00000175795	ENSMUSP00000135488	TRANSLATION	protein_coding	-	CCDS57631.1	1	507	0	0	1.5	56.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000031734	Irx3	ENSMUST00000093312	ENSMUSP00000091002	TRANSLATION	protein_coding	-	CCDS57630.1	1	522	0	0	1.5	56.8	0	-4,-6	-	-	6	PRINCIPAL:4
ENSMUSG00000038697	Taf5l	ENSMUST00000212010	ENSMUSP00000148808	TRANSLATION	protein_coding	stop	-	2	192	0	0.6	0	93.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038697	Taf5l	ENSMUST00000093039	ENSMUSP00000090726	TRANSLATION	protein_coding	-	CCDS22767.1	1	589	0	0.76	14.8	267.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038697	Taf5l	ENSMUST00000165628	ENSMUSP00000128710	TRANSLATION	protein_coding	-	CCDS22767.1	1	589	0	0.76	14.8	267.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038697	Taf5l	ENSMUST00000213055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037316	Bag4	ENSMUST00000209948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037316	Bag4	ENSMUST00000210103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037316	Bag4	ENSMUST00000038498	ENSMUSP00000044725	TRANSLATION	protein_coding	-	CCDS22201.1	1	457	0	1	6.3	62	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031858	Mau2	ENSMUST00000212596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031858	Mau2	ENSMUST00000212451	ENSMUSP00000148601	TRANSLATION	protein_coding	-	-	1	619	0	0	1.5	0	0	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031858	Mau2	ENSMUST00000212308	ENSMUSP00000148479	TRANSLATION	protein_coding	-	CCDS85550.1	1	650	0	0	1.5	0	0	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031858	Mau2	ENSMUST00000212401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031858	Mau2	ENSMUST00000168013	ENSMUSP00000131966	TRANSLATION	protein_coding	-	-	5	619	0	0	1.5	0	0	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031858	Mau2	ENSMUST00000212055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031858	Mau2	ENSMUST00000212845	ENSMUSP00000148532	TRANSLATION	nonsense_mediated_decay	-	-	1	448	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000031858	Mau2	ENSMUST00000050561	ENSMUSP00000054763	TRANSLATION	protein_coding	-	CCDS40364.1	1	618	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000012889	Podnl1	ENSMUST00000147175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012889	Podnl1	ENSMUST00000093380	ENSMUSP00000091073	TRANSLATION	protein_coding	-	CCDS52615.1	1	559	0	6.59	0.5	187.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031837	Necab2	ENSMUST00000148328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031837	Necab2	ENSMUST00000098363	ENSMUSP00000095966	TRANSLATION	protein_coding	-	CCDS22705.1	1	389	7	0	0.5	89.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000036180	Gatad2a	ENSMUST00000177851	ENSMUSP00000137386	TRANSLATION	protein_coding	-	-	5	614	5	1.5	0	70.5	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000036180	Gatad2a	ENSMUST00000212478	ENSMUSP00000148474	TRANSLATION	protein_coding	-	CCDS52567.1	5	629	5	1.5	1.5	70.5	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000036180	Gatad2a	ENSMUST00000211960	ENSMUSP00000148579	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036180	Gatad2a	ENSMUST00000116463	ENSMUSP00000112164	TRANSLATION	protein_coding	-	CCDS52567.1	1	629	5	1.5	1.5	70.5	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000036180	Gatad2a	ENSMUST00000065169	ENSMUSP00000070229	TRANSLATION	protein_coding	-	CCDS22355.1	1	630	5	1.5	1.5	70.5	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000036180	Gatad2a	ENSMUST00000212277	ENSMUSP00000148637	TRANSLATION	protein_coding	stop	-	3	161	0	1	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046844	Vat1l	ENSMUST00000150963	ENSMUSP00000116680	TRANSLATION	protein_coding	stop	-	3	127	1	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046844	Vat1l	ENSMUST00000049509	ENSMUSP00000053431	TRANSLATION	protein_coding	-	CCDS22689.1	1	417	19	7.25	11.5	48.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000046844	Vat1l	ENSMUST00000124143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046844	Vat1l	ENSMUST00000142591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070044	Fam149a	ENSMUST00000135912	ENSMUSP00000120196	TRANSLATION	protein_coding	start	-	1	744	0	0	0	94.5	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000070044	Fam149a	ENSMUST00000093526	ENSMUSP00000091245	TRANSLATION	protein_coding	-	CCDS22277.1	1	787	0	0	0.5	94.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000070044	Fam149a	ENSMUST00000155230	ENSMUSP00000114612	TRANSLATION	protein_coding	start	-	1	706	0	0	0	94.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056973	Ces1d	ENSMUST00000143256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056973	Ces1d	ENSMUST00000148340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056973	Ces1d	ENSMUST00000034172	ENSMUSP00000034172	TRANSLATION	protein_coding	-	CCDS22528.1	1	565	6	12	2.7	544.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056973	Ces1d	ENSMUST00000129987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031876	Gm45711	ENSMUST00000162616	ENSMUSP00000124800	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	391	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000031537	Ikbkb	ENSMUST00000150259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000149093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000125314	ENSMUSP00000138156	TRANSLATION	nonsense_mediated_decay	-	-	1	442	18	10.73	0	185.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031537	Ikbkb	ENSMUST00000132279	ENSMUSP00000120049	TRANSLATION	protein_coding	start	-	2	35	0	0.816	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031537	Ikbkb	ENSMUST00000144583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000131767	ENSMUSP00000120916	TRANSLATION	protein_coding	start/stop	-	5	100	6	2.43	0	54.6	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000031537	Ikbkb	ENSMUST00000033939	ENSMUSP00000033939	TRANSLATION	protein_coding	-	CCDS52522.1	1	757	18	18.46	6.3	245.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031537	Ikbkb	ENSMUST00000146212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000063401	ENSMUSP00000064235	TRANSLATION	protein_coding	-	CCDS22182.1	1	738	18	18.46	0.5	222.6	0	-4,-5	-	-	16.602	MINOR
ENSMUSG00000031537	Ikbkb	ENSMUST00000144895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000150214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031537	Ikbkb	ENSMUST00000126496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000126439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031537	Ikbkb	ENSMUST00000135326	ENSMUSP00000138378	TRANSLATION	nonsense_mediated_decay	-	-	1	442	18	10.73	0	185.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089857	Zfp882	ENSMUST00000126607	ENSMUSP00000119978	TRANSLATION	protein_coding	stop	-	3	125	0	1	0	75.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089857	Zfp882	ENSMUST00000125802	ENSMUSP00000121316	TRANSLATION	protein_coding	stop	-	2	92	0	1	0	75.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089857	Zfp882	ENSMUST00000110002	ENSMUSP00000105629	TRANSLATION	protein_coding	-	CCDS52589.1	1	555	58	1.4	0.5	234.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043687	1190005I06Rik	ENSMUST00000144417	ENSMUSP00000121882	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000043687	1190005I06Rik	ENSMUST00000123927	ENSMUSP00000119467	TRANSLATION	protein_coding	-	CCDS52690.1	1	111	0	0	1.5	137.1	0	-4,-2	-	-	6.2	MINOR
ENSMUSG00000043687	1190005I06Rik	ENSMUST00000180677	ENSMUSP00000137752	TRANSLATION	protein_coding	-	-	3	76	0	0	6	137.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000038064	Cldn22	ENSMUST00000038693	ENSMUSP00000041676	TRANSLATION	protein_coding	-	CCDS52550.1	-	220	0	0.6	3.9	74.3	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000038416	Cdc16	ENSMUST00000130173	ENSMUSP00000147399	TRANSLATION	protein_coding	stop	-	5	188	0	4.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038416	Cdc16	ENSMUST00000134645	ENSMUSP00000147594	TRANSLATION	protein_coding	stop	-	1	85	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038416	Cdc16	ENSMUST00000137360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038416	Cdc16	ENSMUST00000043962	ENSMUSP00000047950	TRANSLATION	protein_coding	-	CCDS22114.1	1	620	0	15.5	7.5	111	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038416	Cdc16	ENSMUST00000129872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010435	Spaca7	ENSMUST00000210424	ENSMUSP00000147538	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000010435	Spaca7	ENSMUST00000210276	ENSMUSP00000147722	TRANSLATION	protein_coding	-	-	5	158	0	0	1	137.2	0	3,-2	-	-	5.226	ALTERNATIVE:2
ENSMUSG00000010435	Spaca7	ENSMUST00000211182	ENSMUSP00000147934	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000010435	Spaca7	ENSMUST00000209428	ENSMUSP00000147552	TRANSLATION	protein_coding	-	-	1	166	0	0	0	136.8	0	3,-2	-	-	5.202	ALTERNATIVE:2
ENSMUSG00000010435	Spaca7	ENSMUST00000010579	ENSMUSP00000010579	TRANSLATION	protein_coding	-	CCDS40222.1	1	182	0	0	0.5	150.1	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000039960	Rhou	ENSMUST00000136615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039960	Rhou	ENSMUST00000045487	ENSMUSP00000038915	TRANSLATION	protein_coding	-	CCDS22762.1	1	261	22	2.5	5.3	169.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000074454	Defb33	ENSMUST00000098908	ENSMUSP00000096507	TRANSLATION	protein_coding	-	CCDS57609.1	2	62	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000031640	Gm45753	ENSMUST00000116473	ENSMUSP00000112174	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	86	10	1.8	0	74.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000055435	Maf	ENSMUST00000069009	ENSMUSP00000067704	TRANSLATION	protein_coding	-	-	1	380	0	0.6	0	189.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000055435	Maf	ENSMUST00000109104	ENSMUSP00000104732	TRANSLATION	protein_coding	-	CCDS40486.1	-	370	0	0.6	0.5	189.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000038257	Glra3	ENSMUST00000164020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038257	Glra3	ENSMUST00000000275	ENSMUSP00000000275	TRANSLATION	protein_coding	-	-	1	464	5	6.5	6	298	3	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000038257	Glra3	ENSMUST00000239388	ENSMUSP00000159349	TRANSLATION	protein_coding	-	CCDS40340.1	-	480	5	6.5	1.5	298	3	-3,-1	-	-	17.2	MINOR
ENSMUSG00000031954	Cfdp1	ENSMUST00000034432	ENSMUSP00000034432	TRANSLATION	protein_coding	-	CCDS22680.1	1	295	0	0	1.5	105.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000089665	Fcor	ENSMUST00000159364	ENSMUSP00000146366	TRANSLATION	protein_coding	-	-	1	106	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000035439	Haus8	ENSMUST00000035960	ENSMUSP00000040802	TRANSLATION	protein_coding	-	CCDS52579.1	1	373	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000035439	Haus8	ENSMUST00000123495	ENSMUSP00000123517	TRANSLATION	nonsense_mediated_decay	-	-	5	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035439	Haus8	ENSMUST00000134361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035439	Haus8	ENSMUST00000144726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035439	Haus8	ENSMUST00000110071	ENSMUSP00000105698	TRANSLATION	protein_coding	-	CCDS22389.1	1	372	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000035439	Haus8	ENSMUST00000129455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035439	Haus8	ENSMUST00000128833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035439	Haus8	ENSMUST00000157039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037656	Slc20a2	ENSMUST00000209347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037656	Slc20a2	ENSMUST00000067786	ENSMUSP00000065935	TRANSLATION	protein_coding	-	CCDS22178.1	1	656	0	0	1.5	454.4	7	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037656	Slc20a2	ENSMUST00000210388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037656	Slc20a2	ENSMUST00000210854	ENSMUSP00000147570	TRANSLATION	protein_coding	stop	-	2	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037656	Slc20a2	ENSMUST00000209305	ENSMUSP00000147392	TRANSLATION	protein_coding	stop	-	2	28	0	0	0	0	1	0,-5	-	-	-1	MINOR
ENSMUSG00000003849	Nqo1	ENSMUST00000003947	ENSMUSP00000003947	TRANSLATION	protein_coding	-	CCDS40465.1	1	274	20	5	5.9	168.7	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000079842	Spag11a	ENSMUST00000058955	ENSMUSP00000055391	TRANSLATION	protein_coding	-	CCDS40252.1	1	69	0	0	1.5	40.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000107280	Gm9495	ENSMUST00000200846	ENSMUSP00000144411	TRANSLATION	protein_coding	-	-	1	350	0	3.27	0.5	94.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032939	Nup93	ENSMUST00000212039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032939	Nup93	ENSMUST00000212167	ENSMUSP00000148672	TRANSLATION	protein_coding	stop	-	3	18	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032939	Nup93	ENSMUST00000212062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032939	Nup93	ENSMUST00000211822	ENSMUSP00000148458	TRANSLATION	protein_coding	-	-	1	699	0	17.066	0	654.4	0	-4,-5	-	-	6.63	MINOR
ENSMUSG00000032939	Nup93	ENSMUST00000212824	ENSMUSP00000148700	TRANSLATION	protein_coding	-	CCDS22540.1	1	819	0	19.75	10.8	654.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032939	Nup93	ENSMUST00000212984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032939	Nup93	ENSMUST00000079961	ENSMUSP00000078878	TRANSLATION	protein_coding	-	CCDS22540.1	1	819	0	19.75	10.8	654.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032939	Nup93	ENSMUST00000109547	ENSMUSP00000105174	TRANSLATION	protein_coding	-	CCDS22540.1	5	819	0	19.75	10.8	654.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031449	Atp4b	ENSMUST00000033826	ENSMUSP00000033826	TRANSLATION	protein_coding	-	CCDS22111.1	1	294	3	6.1	2.7	352.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031449	Atp4b	ENSMUST00000210491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089736	Tgfbr3l	ENSMUST00000208029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089736	Tgfbr3l	ENSMUST00000110993	ENSMUSP00000106621	TRANSLATION	protein_coding	-	CCDS57603.1	5	297	0	1.4	0.5	47	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000089736	Tgfbr3l	ENSMUST00000142865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089736	Tgfbr3l	ENSMUST00000124750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089736	Tgfbr3l	ENSMUST00000209051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033596	Rfwd3	ENSMUST00000038739	ENSMUSP00000043780	TRANSLATION	protein_coding	-	CCDS22672.1	1	774	7	0.84	0.5	37.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033596	Rfwd3	ENSMUST00000212958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036199	Ndufa13	ENSMUST00000110167	ENSMUSP00000105796	TRANSLATION	protein_coding	-	CCDS22353.1	1	144	0	3.5	9.5	167.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036120	Rfxank	ENSMUST00000212472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036120	Rfxank	ENSMUST00000075724	ENSMUSP00000075140	TRANSLATION	protein_coding	-	CCDS85552.1	1	259	0	5.15	6.3	63.5	0	-4,-5	-	-	13.604	PRINCIPAL:1
ENSMUSG00000036120	Rfxank	ENSMUST00000212320	ENSMUSP00000148739	TRANSLATION	protein_coding	-	CCDS22360.1	1	269	0	5.348	0.5	63.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000036120	Rfxank	ENSMUST00000211970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079113	Defa43	ENSMUST00000110749	ENSMUSP00000106377	TRANSLATION	protein_coding	-	CCDS52512.1	1	116	0	0	0.5	82.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031523	Dlc1	ENSMUST00000156312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031523	Dlc1	ENSMUST00000036104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031523	Dlc1	ENSMUST00000178717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031523	Dlc1	ENSMUST00000098826	ENSMUSP00000096425	TRANSLATION	protein_coding	-	CCDS57616.1	1	1126	0	9.85	1.7	338.9	0	-4,-7	-	-	11.239	MINOR
ENSMUSG00000031523	Dlc1	ENSMUST00000179501	ENSMUSP00000137498	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031523	Dlc1	ENSMUST00000033923	ENSMUSP00000033923	TRANSLATION	protein_coding	-	CCDS40322.1	1	1092	0	10.35	3.9	338.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031523	Dlc1	ENSMUST00000145245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031523	Dlc1	ENSMUST00000163663	ENSMUSP00000132812	TRANSLATION	protein_coding	-	CCDS57617.1	5	1543	0	9.85	1.5	338.9	0	-4,-5	-	-	11.17	MINOR
ENSMUSG00000031523	Dlc1	ENSMUST00000179652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071169	Defb46	ENSMUST00000095436	ENSMUSP00000093087	TRANSLATION	protein_coding	-	CCDS40256.1	1	57	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000057400	Ces1c	ENSMUST00000211843	ENSMUSP00000148619	TRANSLATION	protein_coding	start/stop	-	5	177	2	4.5	0	183.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057400	Ces1c	ENSMUST00000212091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057400	Ces1c	ENSMUST00000034189	ENSMUSP00000034189	TRANSLATION	protein_coding	-	CCDS22527.1	1	554	6	12.59	1.5	530.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000079038	D130040H23Rik	ENSMUST00000078257	ENSMUSP00000077378	TRANSLATION	protein_coding	-	CCDS52565.1	2	405	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079038	D130040H23Rik	ENSMUST00000211805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079038	D130040H23Rik	ENSMUST00000212443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079038	D130040H23Rik	ENSMUST00000212549	ENSMUSP00000148399	TRANSLATION	protein_coding	-	-	1	395	44	0.6	0	188.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031756	Cenpn	ENSMUST00000212775	ENSMUSP00000148610	TRANSLATION	protein_coding	-	-	3	136	0	0	0	68.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031756	Cenpn	ENSMUST00000212578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031756	Cenpn	ENSMUST00000212184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031756	Cenpn	ENSMUST00000034205	ENSMUSP00000034205	TRANSLATION	protein_coding	-	CCDS22693.1	1	337	0	0	0.5	263.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031756	Cenpn	ENSMUST00000212263	ENSMUSP00000148413	TRANSLATION	protein_coding	-	-	1	250	0	0	0	205.6	0	-4,-5	-	-	2.55	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000209795	ENSMUSP00000148192	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	47.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000209563	ENSMUSP00000147310	TRANSLATION	protein_coding	stop	-	3	185	0	0	0	67.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000210445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031483	Erlin2	ENSMUST00000211233	ENSMUSP00000147642	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000209520	ENSMUSP00000147897	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	72.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000209976	ENSMUSP00000147516	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	26	0	0,-3	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000211043	ENSMUSP00000147616	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	54.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000209504	ENSMUSP00000148228	TRANSLATION	protein_coding	start/stop	-	3	251	0	0	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031483	Erlin2	ENSMUST00000033873	ENSMUSP00000033873	TRANSLATION	protein_coding	-	CCDS22209.1	1	340	0	0	6.3	72.9	0	0,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000006570	Defb2	ENSMUST00000006745	ENSMUSP00000006745	TRANSLATION	protein_coding	-	CCDS40284.1	1	71	0	0	0.5	42	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000063605	Ccdc102a	ENSMUST00000077955	ENSMUSP00000077107	TRANSLATION	protein_coding	-	CCDS22551.1	1	549	0	0	3.9	50.1	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000063605	Ccdc102a	ENSMUST00000162020	ENSMUSP00000124262	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022322	Shcbp1	ENSMUST00000207262	ENSMUSP00000146339	TRANSLATION	protein_coding	start/stop	-	3	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022322	Shcbp1	ENSMUST00000208856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022322	Shcbp1	ENSMUST00000207665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022322	Shcbp1	ENSMUST00000207876	ENSMUSP00000146454	TRANSLATION	protein_coding	start/stop	-	3	207	0	0	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022322	Shcbp1	ENSMUST00000208381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022322	Shcbp1	ENSMUST00000022945	ENSMUSP00000022945	TRANSLATION	protein_coding	-	CCDS22088.1	1	668	0	0	0.5	48.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022322	Shcbp1	ENSMUST00000207725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031787	Katnb1	ENSMUST00000212565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031787	Katnb1	ENSMUST00000034239	ENSMUSP00000034239	TRANSLATION	protein_coding	-	CCDS22555.1	1	658	0	6.4	6.3	347.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031787	Katnb1	ENSMUST00000212895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031787	Katnb1	ENSMUST00000212528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031787	Katnb1	ENSMUST00000212968	ENSMUSP00000148781	TRANSLATION	nonsense_mediated_decay	-	-	5	109	0	2.4	0	46.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060560	Ces4a	ENSMUST00000161289	ENSMUSP00000125062	TRANSLATION	protein_coding	-	CCDS22591.2	1	563	6	11.34	1.5	533.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031737	Irx5	ENSMUST00000034184	ENSMUSP00000034184	TRANSLATION	protein_coding	-	CCDS22522.1	1	484	0	0.4	7.5	56.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031737	Irx5	ENSMUST00000210246	ENSMUSP00000147339	TRANSLATION	protein_coding	-	-	5	516	0	0.4	0	56.9	0	-4,-7	-	-	12	MINOR
ENSMUSG00000109718	Trim61	ENSMUST00000078409	ENSMUSP00000077513	TRANSLATION	protein_coding	-	CCDS22332.1	1	461	8	1.62	0.5	148.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000109718	Trim61	ENSMUST00000211310	ENSMUSP00000147962	TRANSLATION	protein_coding	start	-	5	102	3	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031853	Map3k21	ENSMUST00000034316	ENSMUSP00000034316	TRANSLATION	protein_coding	-	CCDS40519.1	1	1002	18	4.2	0.5	262.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017478	Zc3h18	ENSMUST00000017622	ENSMUSP00000017622	TRANSLATION	protein_coding	-	CCDS22735.1	1	972	4	0	1.5	0	0	-4,-5	-	-	4	PRINCIPAL:4
ENSMUSG00000017478	Zc3h18	ENSMUST00000177049	ENSMUSP00000135014	TRANSLATION	protein_coding	start	-	2	241	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017478	Zc3h18	ENSMUST00000177195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017478	Zc3h18	ENSMUST00000175819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017478	Zc3h18	ENSMUST00000177386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017478	Zc3h18	ENSMUST00000093073	ENSMUSP00000090761	TRANSLATION	protein_coding	-	CCDS22736.1	1	948	4	0	0.5	0	0	-4,-5	-	-	4	ALTERNATIVE:2
ENSMUSG00000017478	Zc3h18	ENSMUST00000177123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017478	Zc3h18	ENSMUST00000176629	ENSMUSP00000134743	TRANSLATION	protein_coding	-	CCDS80941.1	1	950	4	0	0.5	0	0	-4,-5	-	-	4	ALTERNATIVE:2
ENSMUSG00000017478	Zc3h18	ENSMUST00000175798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017478	Zc3h18	ENSMUST00000176699	ENSMUSP00000135438	TRANSLATION	protein_coding	stop	-	2	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034041	Lyl1	ENSMUST00000238562	ENSMUSP00000158636	TRANSLATION	protein_coding	-	-	-	205	0	1.6	0.5	53.6	0	-1,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000034041	Lyl1	ENSMUST00000238338	ENSMUSP00000158640	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034041	Lyl1	ENSMUST00000037165	ENSMUSP00000046010	TRANSLATION	protein_coding	-	CCDS22476.1	1	278	0	1.6	1.5	53.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000034041	Lyl1	ENSMUST00000238364	ENSMUSP00000158840	TRANSLATION	protein_coding	stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078931	Pdf	ENSMUST00000154271	ENSMUSP00000138756	TRANSLATION	nonsense_mediated_decay	start	-	1	24	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078931	Pdf	ENSMUST00000055316	ENSMUSP00000138676	TRANSLATION	protein_coding	-	CCDS59743.1	1	231	6	2.5	0.5	133.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000003813	Rad23a	ENSMUST00000134395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003813	Rad23a	ENSMUST00000144675	ENSMUSP00000114431	TRANSLATION	protein_coding	start	-	3	147	0	4.066	0	88.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003813	Rad23a	ENSMUST00000003911	ENSMUSP00000003911	TRANSLATION	protein_coding	-	CCDS40414.1	1	362	0	9	7.5	262	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000003813	Rad23a	ENSMUST00000109761	ENSMUSP00000105383	TRANSLATION	protein_coding	-	CCDS80908.1	1	363	0	9	7.5	262	0	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000003813	Rad23a	ENSMUST00000144994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003813	Rad23a	ENSMUST00000128035	ENSMUSP00000115664	TRANSLATION	protein_coding	stop	-	1	322	0	7.25	1.5	217.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003813	Rad23a	ENSMUST00000125711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031783	Polr2c	ENSMUST00000212744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031783	Polr2c	ENSMUST00000211957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031783	Polr2c	ENSMUST00000211939	ENSMUSP00000148830	TRANSLATION	protein_coding	-	-	2	439	4	5.75	0	165.1	0	-4,-5	-	-	11.374	MINOR
ENSMUSG00000031783	Polr2c	ENSMUST00000212120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031783	Polr2c	ENSMUST00000212124	ENSMUSP00000148321	TRANSLATION	protein_coding	start	-	3	170	4	3.25	0	109.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031783	Polr2c	ENSMUST00000212848	ENSMUSP00000148434	TRANSLATION	nonsense_mediated_decay	start	-	3	128	3	2.5	0	78.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031783	Polr2c	ENSMUST00000109521	ENSMUSP00000105147	TRANSLATION	protein_coding	-	CCDS40442.1	1	275	4	7.25	21.5	192.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000015341	Golga7	ENSMUST00000211602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015341	Golga7	ENSMUST00000135646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015341	Golga7	ENSMUST00000121783	ENSMUSP00000112935	TRANSLATION	protein_coding	-	CCDS40297.1	1	137	0	0	15	116.9	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000015341	Golga7	ENSMUST00000051094	ENSMUSP00000062983	TRANSLATION	protein_coding	-	CCDS40297.1	1	137	0	0	15	116.9	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000067627	Gm10217	ENSMUST00000088080	ENSMUSP00000085399	TRANSLATION	protein_coding	start/stop	-	5	45	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000007888	Crlf1	ENSMUST00000008032	ENSMUSP00000008032	TRANSLATION	protein_coding	-	CCDS22369.1	1	425	0	4.324	2.7	86.8	0	-1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000007888	Crlf1	ENSMUST00000132648	ENSMUSP00000119545	TRANSLATION	protein_coding	start/stop	-	3	129	0	2.3	0	54.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007888	Crlf1	ENSMUST00000127983	ENSMUSP00000115614	TRANSLATION	protein_coding	start	-	2	118	0	0.64	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034656	Cacna1a	ENSMUST00000238701	ENSMUSP00000158803	TRANSLATION	protein_coding	-	-	-	2457	0	30.71	0.5	1067.6	18	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034656	Cacna1a	ENSMUST00000144879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034656	Cacna1a	ENSMUST00000141981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034656	Cacna1a	ENSMUST00000121390	ENSMUSP00000112436	TRANSLATION	protein_coding	-	CCDS52618.1	1	2368	0	30.71	1.5	1067.6	18	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000034656	Cacna1a	ENSMUST00000130507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034656	Cacna1a	ENSMUST00000238337	ENSMUSP00000158675	TRANSLATION	protein_coding	-	-	-	776	0	7.19	0	312.7	2	-4,0	-	-	0	MINOR
ENSMUSG00000034656	Cacna1a	ENSMUST00000126302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034656	Cacna1a	ENSMUST00000129620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034656	Cacna1a	ENSMUST00000153691	ENSMUSP00000158603	TRANSLATION	protein_coding	start/stop	-	5	183	0	4.55	0	206.8	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000034656	Cacna1a	ENSMUST00000215756	ENSMUSP00000149242	TRANSLATION	protein_coding	start	-	5	2321	0	30.51	0	1067.6	18	-4,0	-	-	-1	MINOR
ENSMUSG00000034656	Cacna1a	ENSMUST00000143215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034656	Cacna1a	ENSMUST00000122053	ENSMUSP00000114055	TRANSLATION	protein_coding	-	CCDS57628.1	1	2321	0	29.21	0.5	1040	18	-4,-5	-	-	7.344	MINOR
ENSMUSG00000034656	Cacna1a	ENSMUST00000135382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002393	Nr2f6	ENSMUST00000132630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002393	Nr2f6	ENSMUST00000155463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002393	Nr2f6	ENSMUST00000002466	ENSMUSP00000002466	TRANSLATION	protein_coding	-	CCDS22392.1	1	390	8	4.91	1.5	235.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002393	Nr2f6	ENSMUST00000137058	ENSMUSP00000121648	TRANSLATION	protein_coding	start/stop	-	3	270	3	2.348	0	92.7	0	-3,1	-	-	-1	MINOR
ENSMUSG00000002393	Nr2f6	ENSMUST00000137734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002393	Nr2f6	ENSMUST00000124732	ENSMUSP00000116498	TRANSLATION	protein_coding	start/stop	-	3	254	3	2.9	0	113.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002393	Nr2f6	ENSMUST00000127443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002393	Nr2f6	ENSMUST00000156270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036977	Anapc10	ENSMUST00000048147	ENSMUSP00000048244	TRANSLATION	protein_coding	-	CCDS22439.1	1	185	3	4	19.5	273.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000036977	Anapc10	ENSMUST00000210485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036977	Anapc10	ENSMUST00000210812	ENSMUSP00000148220	TRANSLATION	protein_coding	-	CCDS22439.1	1	185	3	4	19.5	273.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000057228	Aadat	ENSMUST00000209338	ENSMUSP00000148060	TRANSLATION	protein_coding	-	-	1	432	13	10.25	0	75.7	0	-4,-7	-	-	16.5	MINOR
ENSMUSG00000057228	Aadat	ENSMUST00000079472	ENSMUSP00000078436	TRANSLATION	protein_coding	-	CCDS22320.1	1	425	13	11	1.7	75.7	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000057228	Aadat	ENSMUST00000211032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031958	Ldhd	ENSMUST00000173521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031958	Ldhd	ENSMUST00000173909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031958	Ldhd	ENSMUST00000070004	ENSMUSP00000068086	TRANSLATION	protein_coding	-	CCDS22677.1	1	484	31	5.32	6.3	361.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000060070	Defa26	ENSMUST00000074343	ENSMUSP00000073950	TRANSLATION	protein_coding	-	CCDS40278.1	1	93	0	0	1.5	113	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000069922	Ces3a	ENSMUST00000212481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069922	Ces3a	ENSMUST00000212329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069922	Ces3a	ENSMUST00000093223	ENSMUSP00000090911	TRANSLATION	protein_coding	-	CCDS52652.1	1	524	5	8.85	0.5	482.5	0	0,-3	-	-	12.642	MINOR
ENSMUSG00000069922	Ces3a	ENSMUST00000093222	ENSMUSP00000090910	TRANSLATION	protein_coding	-	CCDS52651.1	1	571	6	9.65	0.5	528.4	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000069922	Ces3a	ENSMUST00000213054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031621	Isx	ENSMUST00000174427	ENSMUSP00000134368	TRANSLATION	protein_coding	-	CCDS80899.1	1	242	0	1.75	1.5	82	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031621	Isx	ENSMUST00000034034	ENSMUSP00000034034	TRANSLATION	protein_coding	-	CCDS40391.1	1	240	0	1.75	1.5	82	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000031659	Adcy7	ENSMUST00000210688	ENSMUSP00000148207	TRANSLATION	nonsense_mediated_decay	start	-	1	428	4	3.5	0	264.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000031659	Adcy7	ENSMUST00000169037	ENSMUSP00000130594	TRANSLATION	protein_coding	-	CCDS22509.1	1	1099	8	9.4	1.5	573.2	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031659	Adcy7	ENSMUST00000098521	ENSMUSP00000096122	TRANSLATION	protein_coding	-	CCDS22509.1	1	1099	8	9.4	1.5	573.2	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031659	Adcy7	ENSMUST00000211311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031659	Adcy7	ENSMUST00000168545	ENSMUSP00000129252	TRANSLATION	protein_coding	-	CCDS22509.1	1	1099	8	9.4	1.5	573.2	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031659	Adcy7	ENSMUST00000171456	ENSMUSP00000132528	TRANSLATION	protein_coding	-	CCDS22509.1	1	1099	8	9.4	1.5	573.2	13	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000026317	Cln8	ENSMUST00000027554	ENSMUSP00000027554	TRANSLATION	protein_coding	-	CCDS40239.1	1	288	0	0	3.9	44.9	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000026317	Cln8	ENSMUST00000128839	ENSMUSP00000121618	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000026317	Cln8	ENSMUST00000133578	ENSMUSP00000122765	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026317	Cln8	ENSMUST00000132001	ENSMUSP00000116550	TRANSLATION	protein_coding	stop	-	2	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026317	Cln8	ENSMUST00000123990	ENSMUSP00000119031	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000045333	Zfp423	ENSMUST00000174249	ENSMUSP00000134103	TRANSLATION	protein_coding	stop	-	2	121	7	0.8	0	23.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045333	Zfp423	ENSMUST00000109655	ENSMUSP00000105282	TRANSLATION	protein_coding	-	CCDS52627.1	1	1292	81	1.6	2.9	157.9	0	-4,-6	-	-	18.884	PRINCIPAL:3
ENSMUSG00000045333	Zfp423	ENSMUST00000165770	ENSMUSP00000129724	TRANSLATION	protein_coding	-	CCDS80911.1	1	1167	78	1.6	5.3	157.9	0	-4,-5	-	-	18.002	ALTERNATIVE:1
ENSMUSG00000045333	Zfp423	ENSMUST00000052250	ENSMUSP00000052379	TRANSLATION	protein_coding	-	-	1	1271	81	1.6	0	157.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000045333	Zfp423	ENSMUST00000173092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045333	Zfp423	ENSMUST00000173725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045333	Zfp423	ENSMUST00000174764	ENSMUSP00000134575	TRANSLATION	protein_coding	stop	-	3	244	18	1.6	0	43.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000145678	ENSMUSP00000120448	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000133117	ENSMUSP00000147440	TRANSLATION	nonsense_mediated_decay	-	-	1	158	5	0	0	45.2	6	0,-3	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000068916	ENSMUSP00000067035	TRANSLATION	protein_coding	-	CCDS40306.1	1	260	8	0	2.7	111.3	11	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031570	Plpp5	ENSMUST00000146762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000209483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000139120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000209843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000210624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000139836	ENSMUSP00000122437	TRANSLATION	protein_coding	-	CCDS80868.1	1	226	7	0	0.5	82.7	10	0,-3	-	-	9.534	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000138548	ENSMUSP00000147452	TRANSLATION	nonsense_mediated_decay	start	-	1	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000138879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000210629	ENSMUSP00000147277	TRANSLATION	protein_coding	start	-	3	151	7	0	0	82.7	5	-1,-4	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000124764	ENSMUSP00000123420	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000031570	Plpp5	ENSMUST00000209373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031570	Plpp5	ENSMUST00000209375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031600	Vps37a	ENSMUST00000098817	ENSMUSP00000096415	TRANSLATION	protein_coding	-	CCDS22254.1	1	397	0	0	7.5	124.7	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000031600	Vps37a	ENSMUST00000238628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031600	Vps37a	ENSMUST00000238390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031600	Vps37a	ENSMUST00000238249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031600	Vps37a	ENSMUST00000238575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031600	Vps37a	ENSMUST00000238624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031600	Vps37a	ENSMUST00000238339	ENSMUSP00000158798	TRANSLATION	protein_coding	-	-	-	397	0	0	0	112.7	0	-4,-1	-	-	5.28	MINOR
ENSMUSG00000070023	Gm10283	ENSMUST00000093494	ENSMUSP00000091206	TRANSLATION	protein_coding	-	-	1	117	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000069633	Pex11g	ENSMUST00000118194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069633	Pex11g	ENSMUST00000004686	ENSMUSP00000004686	TRANSLATION	protein_coding	-	CCDS22061.1	1	241	0	0	5.1	193.4	2	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000069633	Pex11g	ENSMUST00000111081	ENSMUSP00000106710	TRANSLATION	protein_coding	-	-	1	176	0	0	0	94.8	1	-4,-7	-	-	0.084	MINOR
ENSMUSG00000004319	Clcn3	ENSMUST00000093490	ENSMUSP00000091202	TRANSLATION	protein_coding	-	CCDS22323.1	1	760	0	5.24	0.5	413.2	11	-4,-6	-	-	12	MINOR
ENSMUSG00000004319	Clcn3	ENSMUST00000147824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004319	Clcn3	ENSMUST00000145741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004319	Clcn3	ENSMUST00000145493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004319	Clcn3	ENSMUST00000132234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004319	Clcn3	ENSMUST00000110302	ENSMUSP00000105931	TRANSLATION	protein_coding	-	-	5	839	0	5.24	12.8	405.1	11	-4,-5	-	-	14.886	MINOR
ENSMUSG00000004319	Clcn3	ENSMUST00000110301	ENSMUSP00000105930	TRANSLATION	protein_coding	-	CCDS52554.1	1	818	0	5.24	15	413.2	11	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000004319	Clcn3	ENSMUST00000129672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004319	Clcn3	ENSMUST00000056508	ENSMUSP00000058648	TRANSLATION	protein_coding	-	CCDS22322.1	1	791	0	5.24	15	413.2	11	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000004319	Clcn3	ENSMUST00000004430	ENSMUSP00000004430	TRANSLATION	protein_coding	-	CCDS52555.1	1	866	0	5.24	13.6	405.1	11	-4,-5	-	-	15.114	ALTERNATIVE:1
ENSMUSG00000031551	Ido1	ENSMUST00000033956	ENSMUSP00000033956	TRANSLATION	protein_coding	-	CCDS40299.1	1	407	18	8.75	1.5	397.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031551	Ido1	ENSMUST00000110667	ENSMUSP00000106295	TRANSLATION	protein_coding	-	CCDS80866.1	1	316	18	6	0.5	322.3	0	-4,-5	-	-	8.004	MINOR
ENSMUSG00000031637	Lrp2bp	ENSMUST00000066451	ENSMUSP00000067177	TRANSLATION	protein_coding	-	-	1	367	0	4.34	0	117.4	0	-4,-6	-	-	12	MINOR
ENSMUSG00000031637	Lrp2bp	ENSMUST00000138230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031637	Lrp2bp	ENSMUST00000110380	ENSMUSP00000106009	TRANSLATION	protein_coding	-	CCDS22286.1	1	346	0	4.34	7.5	117.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031637	Lrp2bp	ENSMUST00000145597	ENSMUSP00000135210	TRANSLATION	nonsense_mediated_decay	-	-	5	213	0	2.16	0	68.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031637	Lrp2bp	ENSMUST00000132341	ENSMUSP00000147936	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000031637	Lrp2bp	ENSMUST00000110381	ENSMUSP00000106010	TRANSLATION	protein_coding	-	CCDS22286.1	1	346	0	4.34	7.5	117.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031782	Coq9	ENSMUST00000160998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031782	Coq9	ENSMUST00000161208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031782	Coq9	ENSMUST00000211859	ENSMUSP00000148339	TRANSLATION	protein_coding	start/stop	-	5	98	0	1.9	0	65.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031782	Coq9	ENSMUST00000159424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031782	Coq9	ENSMUST00000160364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031782	Coq9	ENSMUST00000160779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031782	Coq9	ENSMUST00000159638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031782	Coq9	ENSMUST00000034234	ENSMUSP00000034234	TRANSLATION	protein_coding	-	CCDS22550.1	1	313	0	5.58	1.5	123.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000031782	Coq9	ENSMUST00000159871	ENSMUSP00000124695	TRANSLATION	protein_coding	stop	-	5	270	0	4.25	0	72.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039775	Defb3	ENSMUST00000033852	ENSMUSP00000033852	TRANSLATION	protein_coding	-	CCDS40258.1	1	63	0	1	1.5	49.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031776	Arl2bp	ENSMUST00000212580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031776	Arl2bp	ENSMUST00000034228	ENSMUSP00000034228	TRANSLATION	protein_coding	-	CCDS22545.1	1	163	0	5.33	8.8	117.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031776	Arl2bp	ENSMUST00000211858	ENSMUSP00000148695	TRANSLATION	protein_coding	-	-	5	91	0	3.08	0	68.1	0	-4,-5	-	-	4.554	MINOR
ENSMUSG00000031776	Arl2bp	ENSMUST00000212254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031776	Arl2bp	ENSMUST00000109527	ENSMUSP00000105153	TRANSLATION	protein_coding	-	CCDS40440.1	1	152	0	4.83	2.8	117.2	0	-4,-5	-	-	11.691	MINOR
ENSMUSG00000031776	Arl2bp	ENSMUST00000212877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031627	Irf2	ENSMUST00000210218	ENSMUSP00000147318	TRANSLATION	protein_coding	-	-	3	41	0	1.05	0	30.3	0	-4,-5	-	-	1.44	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000208433	ENSMUSP00000146992	TRANSLATION	protein_coding	stop	-	2	118	0	3.33	0	144.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000210284	ENSMUSP00000147279	TRANSLATION	nonsense_mediated_decay	-	-	1	138	0	3.33	0	144.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000210095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031627	Irf2	ENSMUST00000207571	ENSMUSP00000146495	TRANSLATION	protein_coding	stop	-	5	88	0	2.58	0	117.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000209820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031627	Irf2	ENSMUST00000208507	ENSMUSP00000147138	TRANSLATION	protein_coding	stop	-	5	113	0	3.33	0	144.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000208976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031627	Irf2	ENSMUST00000207105	ENSMUSP00000146714	TRANSLATION	protein_coding	stop	-	5	180	0	2.25	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031627	Irf2	ENSMUST00000210334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031627	Irf2	ENSMUST00000034041	ENSMUSP00000034041	TRANSLATION	protein_coding	-	CCDS22295.1	1	349	0	3.33	8.8	144.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031442	Mcf2l	ENSMUST00000110866	ENSMUSP00000106490	TRANSLATION	protein_coding	-	CCDS52483.1	1	1097	0	14.6852	0.5	269.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031442	Mcf2l	ENSMUST00000110873	ENSMUSP00000106497	TRANSLATION	protein_coding	stop	-	5	866	0	12.9952	0	208.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000134989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031442	Mcf2l	ENSMUST00000173006	ENSMUSP00000134147	TRANSLATION	protein_coding	stop	-	5	757	0	9.85	0	203.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000145067	ENSMUSP00000133577	TRANSLATION	protein_coding	-	-	1	1118	0	14.6852	0	263.4	0	-4,-7	-	-	11.628	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000238472	ENSMUSP00000158824	TRANSLATION	protein_coding	stop	-	-	97	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000127229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031442	Mcf2l	ENSMUST00000110871	ENSMUSP00000106495	TRANSLATION	protein_coding	-	-	5	1046	0	12.916	0	244.7	0	-1,-3	-	-	6.966	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000138387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031442	Mcf2l	ENSMUST00000110879	ENSMUSP00000106503	TRANSLATION	protein_coding	-	-	5	1125	0	14.6852	4.1	269.6	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000031442	Mcf2l	ENSMUST00000156560	ENSMUSP00000122792	TRANSLATION	protein_coding	stop	-	2	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000139776	ENSMUSP00000120946	TRANSLATION	protein_coding	start/stop	-	5	188	0	1.7692	0	24.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000173099	ENSMUSP00000133776	TRANSLATION	protein_coding	-	-	5	1059	0	13.2952	0	244.7	0	-2,-5	-	-	7.728	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000095456	ENSMUSP00000093108	TRANSLATION	protein_coding	-	-	1	1149	0	14.6852	0	269.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031442	Mcf2l	ENSMUST00000145892	ENSMUSP00000114758	TRANSLATION	protein_coding	start/stop	-	5	151	0	1.566	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000126905	ENSMUSP00000118540	TRANSLATION	protein_coding	start	-	1	807	0	14.0852	0	228	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000123811	ENSMUSP00000123434	TRANSLATION	protein_coding	start	-	5	295	0	5.6652	0	55.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000130302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031442	Mcf2l	ENSMUST00000110867	ENSMUSP00000106491	TRANSLATION	protein_coding	-	CCDS52482.1	1	1101	0	14.6852	0.5	269.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031442	Mcf2l	ENSMUST00000156405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031442	Mcf2l	ENSMUST00000110876	ENSMUSP00000106500	TRANSLATION	protein_coding	-	CCDS40225.2	1	1175	0	14.6852	1.5	269.6	0	-4,-5	-	-	12.161	PRINCIPAL:3
ENSMUSG00000031442	Mcf2l	ENSMUST00000098927	ENSMUSP00000096528	TRANSLATION	protein_coding	-	-	5	1067	0	13.2952	0.5	244.7	0	-4,-2	-	-	7.728	MINOR
ENSMUSG00000031442	Mcf2l	ENSMUST00000134227	ENSMUSP00000116731	TRANSLATION	protein_coding	start/stop	-	5	254	0	3.6452	0	26.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031635	Anxa10	ENSMUST00000034054	ENSMUSP00000034054	TRANSLATION	protein_coding	-	CCDS52557.1	1	304	4	8.762	0.5	248.7	0	-4,-5	-	-	13.072	MINOR
ENSMUSG00000031635	Anxa10	ENSMUST00000034052	ENSMUSP00000034052	TRANSLATION	protein_coding	-	CCDS52558.1	1	324	4	9.182	13	283.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031635	Anxa10	ENSMUST00000210799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000108900	Ccdc194	ENSMUST00000207913	ENSMUSP00000146946	TRANSLATION	protein_coding	-	-	1	234	0	0	1.5	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000054162	Spock3	ENSMUST00000141513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054162	Spock3	ENSMUST00000138398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054162	Spock3	ENSMUST00000119068	ENSMUSP00000112930	TRANSLATION	protein_coding	-	CCDS22326.1	5	436	3	2.26	0.5	225.6	0	1,-3	-	-	15	PRINCIPAL:3
ENSMUSG00000054162	Spock3	ENSMUST00000093480	ENSMUSP00000091192	TRANSLATION	protein_coding	-	CCDS22326.1	5	436	3	2.26	0.5	225.6	0	1,-3	-	-	15	PRINCIPAL:3
ENSMUSG00000054162	Spock3	ENSMUST00000117377	ENSMUSP00000113797	TRANSLATION	protein_coding	-	CCDS57622.1	1	433	3	2.26	0.5	225.6	0	1,-3	-	-	15	ALTERNATIVE:2
ENSMUSG00000054162	Spock3	ENSMUST00000118003	ENSMUSP00000113683	TRANSLATION	protein_coding	-	CCDS22326.1	5	436	3	2.26	0.5	225.6	0	1,-3	-	-	15	PRINCIPAL:3
ENSMUSG00000031530	Dusp4	ENSMUST00000033930	ENSMUSP00000033930	TRANSLATION	protein_coding	-	CCDS22241.1	1	398	9	2.52	0.5	192.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002395	Use1	ENSMUST00000142685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000127517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000137137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000154550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000139541	ENSMUSP00000122406	TRANSLATION	protein_coding	stop	-	2	74	0	0	0	74.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002395	Use1	ENSMUST00000019169	ENSMUSP00000019169	TRANSLATION	protein_coding	-	CCDS22390.1	1	270	0	0	2.7	307.5	1	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000002395	Use1	ENSMUST00000136368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000146221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000110053	ENSMUSP00000105680	TRANSLATION	protein_coding	-	CCDS52582.1	1	284	0	0	0.5	307.5	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002395	Use1	ENSMUST00000143657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000140236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002395	Use1	ENSMUST00000110054	ENSMUSP00000105681	TRANSLATION	protein_coding	-	CCDS22390.1	1	270	0	0	2.7	307.5	1	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000069971	4933402J07Rik	ENSMUST00000093342	ENSMUSP00000091033	TRANSLATION	protein_coding	-	CCDS52626.1	1	270	0	0	0.5	406.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031924	Cyb5b	ENSMUST00000212920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031924	Cyb5b	ENSMUST00000034400	ENSMUSP00000034400	TRANSLATION	protein_coding	-	CCDS22647.1	1	146	20	2.978	2.7	90.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061410	Zcchc14	ENSMUST00000134212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061410	Zcchc14	ENSMUST00000139379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061410	Zcchc14	ENSMUST00000046386	ENSMUSP00000040360	TRANSLATION	protein_coding	-	CCDS22727.1	1	956	4	0.84	0.5	29.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000061410	Zcchc14	ENSMUST00000154725	ENSMUSP00000120570	TRANSLATION	protein_coding	start	-	1	242	4	0	0	29.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000069920	B3gnt9	ENSMUST00000093217	ENSMUSP00000133023	TRANSLATION	protein_coding	-	CCDS40455.1	2	399	0	0	1.5	132.1	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069920	B3gnt9	ENSMUST00000136822	ENSMUSP00000130840	TRANSLATION	protein_coding	-	CCDS40455.1	-	399	0	0	1.5	132.1	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069920	B3gnt9	ENSMUST00000161745	ENSMUSP00000125145	TRANSLATION	protein_coding	stop	-	2	144	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000098851	ENSMUSP00000096450	TRANSLATION	protein_coding	-	CCDS52533.1	1	141	4	2.935	0.5	0	0	-4,-2	-	-	1.932	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000211012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031485	Plpbp	ENSMUST00000211393	ENSMUSP00000147611	TRANSLATION	protein_coding	start	-	1	330	11	5.635	0	63.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000211518	ENSMUSP00000147632	TRANSLATION	protein_coding	start	-	5	137	4	3.105	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000211490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031485	Plpbp	ENSMUST00000209856	ENSMUSP00000147304	TRANSLATION	protein_coding	-	-	1	129	4	2.105	0	0	0	-4,-2	-	-	1.332	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000209525	ENSMUSP00000147943	TRANSLATION	protein_coding	-	CCDS85519.1	1	153	4	3.435	0.5	30.7	0	-4,-2	-	-	5.328	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000209555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031485	Plpbp	ENSMUST00000210225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031485	Plpbp	ENSMUST00000211281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031485	Plpbp	ENSMUST00000211756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031485	Plpbp	ENSMUST00000210141	ENSMUSP00000147855	TRANSLATION	nonsense_mediated_decay	start	-	3	67	4	1.86	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000210765	ENSMUSP00000148019	TRANSLATION	protein_coding	start/stop	-	5	128	3	2.825	0	40.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031485	Plpbp	ENSMUST00000033875	ENSMUSP00000033875	TRANSLATION	protein_coding	-	CCDS40310.1	1	274	11	5.635	3.9	77	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000033751	Gadd45gip1	ENSMUST00000036734	ENSMUSP00000037783	TRANSLATION	protein_coding	-	CCDS22478.1	1	222	0	2	1.7	254.9	0	-2,1	-	-	12	PRINCIPAL:1
ENSMUSG00000031513	Leprotl1	ENSMUST00000033910	ENSMUSP00000033910	TRANSLATION	protein_coding	-	CCDS22239.1	1	131	0	0	21.5	134	0	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000031518	Spata4	ENSMUST00000033917	ENSMUSP00000033917	TRANSLATION	protein_coding	-	CCDS22308.1	1	295	0	1.2	0.5	118.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074217	Misp3	ENSMUST00000056686	ENSMUSP00000062086	TRANSLATION	protein_coding	start	-	3	106	0	0	0	34.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074217	Misp3	ENSMUST00000191523	ENSMUSP00000140360	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	35.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074217	Misp3	ENSMUST00000188195	ENSMUSP00000140472	TRANSLATION	protein_coding	start/stop	-	5	108	0	0	0	36.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074217	Misp3	ENSMUST00000190457	ENSMUSP00000140089	TRANSLATION	protein_coding	-	CCDS80905.1	1	206	0	0	1.5	94.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000074217	Misp3	ENSMUST00000185457	ENSMUSP00000140135	TRANSLATION	protein_coding	stop	-	2	80	0	0	0	39.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039814	Xkr5	ENSMUST00000144987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039814	Xkr5	ENSMUST00000095438	ENSMUSP00000093089	TRANSLATION	protein_coding	-	CCDS52495.1	1	676	0	0	0.5	284	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039814	Xkr5	ENSMUST00000055503	ENSMUSP00000061748	TRANSLATION	protein_coding	-	CCDS40245.1	1	510	0	0	1.5	152.8	5	-2,-5	-	-	0	MINOR
ENSMUSG00000039814	Xkr5	ENSMUST00000152974	ENSMUSP00000119436	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039814	Xkr5	ENSMUST00000143913	ENSMUSP00000121958	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	0	0	55.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000006519	Cyba	ENSMUST00000212822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006519	Cyba	ENSMUST00000017604	ENSMUSP00000017604	TRANSLATION	protein_coding	-	CCDS22737.1	1	192	0	0	1.5	354	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006519	Cyba	ENSMUST00000212600	ENSMUSP00000148320	TRANSLATION	protein_coding	-	CCDS85623.1	1	164	0	0	0.5	269.5	4	-4,-5	-	-	0.93	MINOR
ENSMUSG00000059463	Spag11b	ENSMUST00000039075	ENSMUSP00000048125	TRANSLATION	protein_coding	-	CCDS22133.1	1	113	0	0	1.5	133.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000059463	Spag11b	ENSMUST00000110767	ENSMUSP00000106395	TRANSLATION	protein_coding	-	CCDS40251.1	1	90	0	0	0.5	102	0	3,-2	-	-	4.134	MINOR
ENSMUSG00000031827	Cotl1	ENSMUST00000212676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031827	Cotl1	ENSMUST00000168698	ENSMUSP00000126329	TRANSLATION	protein_coding	-	CCDS22712.1	1	142	0	4.25	12.1	59.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031827	Cotl1	ENSMUST00000034285	ENSMUSP00000034285	TRANSLATION	protein_coding	-	CCDS22712.1	1	142	0	4.25	12.1	59.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031827	Cotl1	ENSMUST00000211873	ENSMUSP00000148448	TRANSLATION	protein_coding	-	-	5	119	0	2.25	0	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000031983	2310022B05Rik	ENSMUST00000034464	ENSMUSP00000034464	TRANSLATION	protein_coding	-	CCDS22773.1	1	322	0	0	0.5	141.4	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031458	Coprs	ENSMUST00000033839	ENSMUSP00000033839	TRANSLATION	protein_coding	-	CCDS40237.1	1	173	0	0	1.5	279.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031458	Coprs	ENSMUST00000210249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031458	Coprs	ENSMUST00000209371	ENSMUSP00000148034	TRANSLATION	protein_coding	-	-	3	80	0	0	0	188.3	0	-4,-5	-	-	0.504	MINOR
ENSMUSG00000031458	Coprs	ENSMUST00000210749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031458	Coprs	ENSMUST00000210188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094687	Defa25	ENSMUST00000095425	ENSMUSP00000093075	TRANSLATION	protein_coding	-	CCDS52502.1	1	92	0	0	0.5	106.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031842	Pde4c	ENSMUST00000123739	ENSMUSP00000119312	TRANSLATION	protein_coding	stop	-	5	178	0	1.65	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031842	Pde4c	ENSMUST00000149272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031842	Pde4c	ENSMUST00000239487	ENSMUSP00000159330	TRANSLATION	protein_coding	-	CCDS22378.1	-	652	6	12.04	0.5	235.7	0	-4,-2	-	-	10.812	MINOR
ENSMUSG00000031842	Pde4c	ENSMUST00000128685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031842	Pde4c	ENSMUST00000224874	ENSMUSP00000153213	TRANSLATION	protein_coding	-	-	-	646	7	13.04	0	307.9	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000031842	Pde4c	ENSMUST00000239435	ENSMUSP00000159363	TRANSLATION	protein_coding	-	-	-	711	6	12.04	0	235.7	0	-4,-7	-	-	10.812	MINOR
ENSMUSG00000031842	Pde4c	ENSMUST00000034307	ENSMUSP00000034307	TRANSLATION	protein_coding	-	CCDS22378.1	1	652	6	12.04	0.5	235.7	0	-4,-2	-	-	10.812	MINOR
ENSMUSG00000031842	Pde4c	ENSMUST00000110095	ENSMUSP00000105722	TRANSLATION	protein_coding	-	CCDS80891.1	1	686	7	13.04	0.5	307.9	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000015016	Acsf3	ENSMUST00000015160	ENSMUSP00000015160	TRANSLATION	protein_coding	-	CCDS40505.1	5	583	15	6.68	1.5	351.8	0	-3,0	-	-	18	PRINCIPAL:1
ENSMUSG00000015016	Acsf3	ENSMUST00000212790	ENSMUSP00000148762	TRANSLATION	protein_coding	-	CCDS40505.1	5	583	15	6.68	1.5	351.8	0	-3,0	-	-	18	PRINCIPAL:1
ENSMUSG00000015016	Acsf3	ENSMUST00000212903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015016	Acsf3	ENSMUST00000212781	ENSMUSP00000148725	TRANSLATION	protein_coding	-	-	2	536	15	6.04	1.2	323.6	0	-3,0	-	-	15.03	MINOR
ENSMUSG00000034807	Colgalt1	ENSMUST00000212706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034807	Colgalt1	ENSMUST00000047903	ENSMUSP00000047923	TRANSLATION	protein_coding	-	CCDS22401.1	1	617	2	0	0.5	185.7	0	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000034807	Colgalt1	ENSMUST00000212216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031534	Smim19	ENSMUST00000163774	ENSMUSP00000131855	TRANSLATION	protein_coding	-	CCDS52521.1	1	112	0	0	0.5	168.8	1	-4,-6	-	-	6	MINOR
ENSMUSG00000031534	Smim19	ENSMUST00000033935	ENSMUSP00000033935	TRANSLATION	protein_coding	-	CCDS52520.1	1	107	0	0	8.8	168.8	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000087687	Pet100	ENSMUST00000156380	ENSMUSP00000137626	TRANSLATION	protein_coding	-	CCDS57601.1	1	76	0	0	10.8	96.8	0	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000087687	Pet100	ENSMUST00000208185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087687	Pet100	ENSMUST00000207428	ENSMUSP00000146950	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	0	0	91.2	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000087687	Pet100	ENSMUST00000207389	ENSMUSP00000146942	TRANSLATION	protein_coding	-	-	2	67	0	0	0	79.6	0	-4,-5	-	-	4.932	MINOR
ENSMUSG00000087687	Pet100	ENSMUST00000207257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087687	Pet100	ENSMUST00000208950	ENSMUSP00000146433	TRANSLATION	nonsense_mediated_decay	-	-	3	76	0	0	10.8	96.8	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000092544	Gm20422	ENSMUST00000126915	ENSMUSP00000122850	TRANSLATION	protein_coding,RT	start/stop	-	5	218	6	2.35	0	77.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000092544	Gm20422	ENSMUST00000149782	ENSMUSP00000123252	TRANSLATION	protein_coding,RT	stop	-	2	255	13	2.6	0	120.9	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000031502	Col4a1	ENSMUST00000208095	ENSMUSP00000146554	TRANSLATION	protein_coding	stop	-	3	133	0	3.88	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031502	Col4a1	ENSMUST00000208386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031502	Col4a1	ENSMUST00000209735	ENSMUSP00000147951	TRANSLATION	nonsense_mediated_decay	-	-	2	1562	0	22.199	0	625	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031502	Col4a1	ENSMUST00000209661	ENSMUSP00000148226	TRANSLATION	nonsense_mediated_decay	start	-	5	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031502	Col4a1	ENSMUST00000209000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031502	Col4a1	ENSMUST00000130488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031502	Col4a1	ENSMUST00000033898	ENSMUSP00000033898	TRANSLATION	protein_coding	-	CCDS40219.1	1	1669	0	25.029	6.3	794.8	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031502	Col4a1	ENSMUST00000209598	ENSMUSP00000147459	TRANSLATION	protein_coding	start	-	5	328	0	5.83	0	211.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031766	Slc12a3	ENSMUST00000211942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031766	Slc12a3	ENSMUST00000211905	ENSMUSP00000148537	TRANSLATION	protein_coding	start	-	1	130	0	0	0	87.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031766	Slc12a3	ENSMUST00000212632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031766	Slc12a3	ENSMUST00000034218	ENSMUSP00000034218	TRANSLATION	protein_coding	-	CCDS57632.1	1	1002	0	0	1.5	1034.4	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031766	Slc12a3	ENSMUST00000212915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031766	Slc12a3	ENSMUST00000212041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031766	Slc12a3	ENSMUST00000212134	ENSMUSP00000148455	TRANSLATION	protein_coding	-	-	1	956	0	0	0	934.5	10	-4,-5	-	-	0.006	MINOR
ENSMUSG00000038250	Usp38	ENSMUST00000211538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038250	Usp38	ENSMUST00000042724	ENSMUSP00000039943	TRANSLATION	protein_coding	-	CCDS22444.1	1	1042	9	7.18	5.1	142.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031486	Adgra2	ENSMUST00000179351	ENSMUSP00000137457	TRANSLATION	protein_coding	start	-	3	176	0	0	0	29.5	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000031486	Adgra2	ENSMUST00000033876	ENSMUSP00000033876	TRANSLATION	protein_coding	-	CCDS22210.2	1	1336	0	4.72	0.5	124	6	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031486	Adgra2	ENSMUST00000178514	ENSMUSP00000136277	TRANSLATION	protein_coding	-	-	5	1121	0	4.72	0	94.5	6	4,-1	-	-	10.23	MINOR
ENSMUSG00000031486	Adgra2	ENSMUST00000179207	ENSMUSP00000137181	TRANSLATION	nonsense_mediated_decay	start	-	5	210	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037993	Dhx38	ENSMUST00000042601	ENSMUSP00000047865	TRANSLATION	protein_coding	-	CCDS22652.1	1	1228	10	14.3	0.5	208.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037993	Dhx38	ENSMUST00000212667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031451	Gas6	ENSMUST00000033828	ENSMUSP00000033828	TRANSLATION	protein_coding	-	CCDS40232.1	1	674	8	11.904	1.5	270.2	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031595	Pdgfrl	ENSMUST00000143216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031595	Pdgfrl	ENSMUST00000034004	ENSMUSP00000034004	TRANSLATION	protein_coding	-	CCDS22259.1	1	375	0	2.2	9.7	32	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000002910	Arrdc2	ENSMUST00000213095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002910	Arrdc2	ENSMUST00000212770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002910	Arrdc2	ENSMUST00000212855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002910	Arrdc2	ENSMUST00000212508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002910	Arrdc2	ENSMUST00000002989	ENSMUSP00000002989	TRANSLATION	protein_coding	-	CCDS40376.1	1	407	0	5.99	0.5	214.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002910	Arrdc2	ENSMUST00000212898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002910	Arrdc2	ENSMUST00000212405	ENSMUSP00000148405	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036686	Cc2d1a	ENSMUST00000040383	ENSMUSP00000046449	TRANSLATION	protein_coding	-	CCDS40407.1	1	943	0	0	0.5	31.3	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000036686	Cc2d1a	ENSMUST00000126364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036686	Cc2d1a	ENSMUST00000154029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036686	Cc2d1a	ENSMUST00000117424	ENSMUSP00000112556	TRANSLATION	protein_coding	-	-	5	897	0	0	0	31.3	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000031831	Dnaaf1	ENSMUST00000093100	ENSMUSP00000090790	TRANSLATION	protein_coding	-	CCDS22709.1	1	634	0	2.48	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000738	Spg7	ENSMUST00000152972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000738	Spg7	ENSMUST00000128234	ENSMUSP00000120793	TRANSLATION	protein_coding	start	-	3	253	7	5.78	0	172.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000153285	ENSMUSP00000115039	TRANSLATION	protein_coding	-	-	5	744	18	11.17	0	399.2	1	-4,0	-	-	14.994	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000149248	ENSMUSP00000119552	TRANSLATION	protein_coding	-	CCDS40508.1	1	781	18	12.17	0.5	416	1	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000000738	Spg7	ENSMUST00000130787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000738	Spg7	ENSMUST00000153492	ENSMUSP00000133602	TRANSLATION	nonsense_mediated_decay	start	-	5	209	3	2.16	0	39	1	1,-3	-	-	-1	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000142150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000738	Spg7	ENSMUST00000128803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000738	Spg7	ENSMUST00000142541	ENSMUSP00000119017	TRANSLATION	protein_coding	stop	-	5	230	3	2.49	0	39	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000108868	ENSMUSP00000104496	TRANSLATION	protein_coding	-	-	2	145	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000212364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000738	Spg7	ENSMUST00000135991	ENSMUSP00000118066	TRANSLATION	protein_coding	start	-	5	90	3	1.95	0	100.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000738	Spg7	ENSMUST00000125975	ENSMUSP00000120361	TRANSLATION	protein_coding	-	-	5	676	18	12.17	0	416	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052554	Defb34	ENSMUST00000064475	ENSMUSP00000064554	TRANSLATION	protein_coding	-	CCDS52497.1	1	81	0	0.8	0.5	27.3	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031508	Ankrd10	ENSMUST00000210530	ENSMUSP00000147908	TRANSLATION	nonsense_mediated_decay	-	-	1	166	0	2.82	0	66.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031508	Ankrd10	ENSMUST00000169782	ENSMUSP00000131657	TRANSLATION	protein_coding	-	CCDS52479.1	1	315	0	2.92	0.5	74.1	0	-4,-5	-	-	10.476	MINOR
ENSMUSG00000031508	Ankrd10	ENSMUST00000211389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031508	Ankrd10	ENSMUST00000033905	ENSMUSP00000033905	TRANSLATION	protein_coding	-	CCDS22098.1	1	415	0	2.92	2.7	99.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031508	Ankrd10	ENSMUST00000210876	ENSMUSP00000147649	TRANSLATION	protein_coding	stop	-	5	52	0	0.8	0	23.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031508	Ankrd10	ENSMUST00000211690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031508	Ankrd10	ENSMUST00000211174	ENSMUSP00000147295	TRANSLATION	nonsense_mediated_decay	-	-	1	174	0	2.7	0	65.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031508	Ankrd10	ENSMUST00000211445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031508	Ankrd10	ENSMUST00000209915	ENSMUSP00000147518	TRANSLATION	nonsense_mediated_decay	-	-	3	101	0	2.06	0	42.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031697	Orc6	ENSMUST00000209733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031697	Orc6	ENSMUST00000034132	ENSMUSP00000034132	TRANSLATION	protein_coding	-	CCDS22497.1	1	262	0	3.25	1.5	50.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031697	Orc6	ENSMUST00000211597	ENSMUSP00000147901	TRANSLATION	protein_coding	stop	-	3	160	0	2	0	50.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031697	Orc6	ENSMUST00000210146	ENSMUSP00000147381	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	2.132	0	50.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031697	Orc6	ENSMUST00000170141	ENSMUSP00000126925	TRANSLATION	protein_coding	-	CCDS52623.1	1	186	0	3.25	1.5	0	0	-4,-7	-	-	6	MINOR
ENSMUSG00000031697	Orc6	ENSMUST00000211396	ENSMUSP00000147488	TRANSLATION	protein_coding	stop	-	3	197	0	2.5	0	35.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031697	Orc6	ENSMUST00000210458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000212228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000212369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000212535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036550	Cnot1	ENSMUST00000213006	ENSMUSP00000148735	TRANSLATION	nonsense_mediated_decay	-	-	1	1614	0	15.6	0	647.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000213046	ENSMUSP00000148709	TRANSLATION	protein_coding	stop	-	3	92	0	1.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000212323	ENSMUSP00000148574	TRANSLATION	nonsense_mediated_decay	-	-	2	213	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000212415	ENSMUSP00000148575	TRANSLATION	nonsense_mediated_decay	start	-	5	122	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000211887	ENSMUSP00000148807	TRANSLATION	protein_coding	-	CCDS85589.1	1	2369	0	31.68	12.6	638.4	0	-4,-7	-	-	14.8	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000212712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000212556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036550	Cnot1	ENSMUST00000212340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000211937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000212195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036550	Cnot1	ENSMUST00000068452	ENSMUSP00000063565	TRANSLATION	protein_coding	-	CCDS57635.1	1	2326	0	30.68	0.5	638.4	0	-4,-7	-	-	9.438	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000211973	ENSMUSP00000148831	TRANSLATION	protein_coding	start/stop	-	5	823	0	10.4	0	432.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036550	Cnot1	ENSMUST00000098473	ENSMUSP00000096073	TRANSLATION	protein_coding	-	-	5	2376	0	31.68	14.8	647.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000036550	Cnot1	ENSMUST00000212302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089704	Galnt2	ENSMUST00000034458	ENSMUSP00000034458	TRANSLATION	protein_coding	-	CCDS22769.1	1	570	23	15	7.4	179.6	0	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000089704	Galnt2	ENSMUST00000142578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089704	Galnt2	ENSMUST00000142547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089704	Galnt2	ENSMUST00000147911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037260	Hgsnat	ENSMUST00000209420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037260	Hgsnat	ENSMUST00000037609	ENSMUSP00000040356	TRANSLATION	protein_coding	-	CCDS40309.1	1	656	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000037260	Hgsnat	ENSMUST00000210894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037260	Hgsnat	ENSMUST00000211550	ENSMUSP00000147675	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054191	Klf1	ENSMUST00000239392	ENSMUSP00000159324	TRANSLATION	protein_coding	-	CCDS22483.1	-	376	12	1.75	1.5	176.7	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000054191	Klf1	ENSMUST00000067060	ENSMUSP00000064366	TRANSLATION	protein_coding	-	-	1	358	12	1.75	0	176.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000071937	Adam25	ENSMUST00000096663	ENSMUSP00000094420	TRANSLATION	protein_coding	-	CCDS22256.1	1	760	16	0.32	0.5	407.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000012705	Retn	ENSMUST00000169234	ENSMUSP00000133024	TRANSLATION	protein_coding	-	CCDS22068.1	2	114	0	2.75	1.5	122.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000012705	Retn	ENSMUST00000012849	ENSMUSP00000012849	TRANSLATION	protein_coding	-	CCDS22068.1	1	114	0	2.75	1.5	122.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000052446	Zfp961	ENSMUST00000136516	ENSMUSP00000122589	TRANSLATION	protein_coding	-	-	2	68	0	1	0	87.1	0	-4,-1	-	-	2.352	MINOR
ENSMUSG00000052446	Zfp961	ENSMUST00000139781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052446	Zfp961	ENSMUST00000144807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052446	Zfp961	ENSMUST00000131237	ENSMUSP00000122942	TRANSLATION	protein_coding	-	-	3	425	44	2.55	1	272.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052446	Zfp961	ENSMUST00000145256	ENSMUSP00000148800	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	1	0	89	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000052446	Zfp961	ENSMUST00000109997	ENSMUSP00000105623	TRANSLATION	protein_coding	-	CCDS52591.1	2	444	44	2.55	0.5	272.4	0	-4,-1	-	-	17.982	PRINCIPAL:2
ENSMUSG00000052446	Zfp961	ENSMUST00000138304	ENSMUSP00000148387	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	1	0	85.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000052446	Zfp961	ENSMUST00000151168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052446	Zfp961	ENSMUST00000136878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052446	Zfp961	ENSMUST00000147033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052446	Zfp961	ENSMUST00000132848	ENSMUSP00000114730	TRANSLATION	protein_coding	-	-	5	194	4	1.96	0	109	0	-4,-1	-	-	4.614	MINOR
ENSMUSG00000031878	Nae1	ENSMUST00000159330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000162466	ENSMUSP00000125456	TRANSLATION	protein_coding	-	-	5	510	0	15.08	0.5	36.3	0	-4,-5	-	-	7.356	MINOR
ENSMUSG00000031878	Nae1	ENSMUST00000160913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000213067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000161474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000212514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000161462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031878	Nae1	ENSMUST00000159702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000161411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000160148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000159696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000159393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031878	Nae1	ENSMUST00000034349	ENSMUSP00000034349	TRANSLATION	protein_coding	-	CCDS40452.1	1	534	0	15.83	11	76.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031772	Cntnap4	ENSMUST00000034225	ENSMUSP00000034225	TRANSLATION	protein_coding	-	CCDS40482.1	1	1310	4	8.9	5.1	385.9	1	-1,-4	-	-	17.76	PRINCIPAL:2
ENSMUSG00000031772	Cntnap4	ENSMUST00000125196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031772	Cntnap4	ENSMUST00000127636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031772	Cntnap4	ENSMUST00000125976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031772	Cntnap4	ENSMUST00000140753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031772	Cntnap4	ENSMUST00000118171	ENSMUSP00000112511	TRANSLATION	protein_coding	-	-	5	1310	4	9.02	5.1	385.5	1	-1,-4	-	-	17.976	ALTERNATIVE:1
ENSMUSG00000005413	Hmox1	ENSMUST00000005548	ENSMUSP00000005548	TRANSLATION	protein_coding	-	CCDS22423.1	1	289	25	4.33	6.3	274.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000005413	Hmox1	ENSMUST00000159631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031860	Pbx4	ENSMUST00000132259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031860	Pbx4	ENSMUST00000156251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031860	Pbx4	ENSMUST00000156319	ENSMUSP00000119526	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	0	0	67.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031860	Pbx4	ENSMUST00000135952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031860	Pbx4	ENSMUST00000081503	ENSMUSP00000080219	TRANSLATION	protein_coding	-	CCDS22352.1	5	378	0	2.5	1.5	352.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031860	Pbx4	ENSMUST00000134777	ENSMUSP00000122281	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0	0	69.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031860	Pbx4	ENSMUST00000151975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031860	Pbx4	ENSMUST00000131637	ENSMUSP00000121369	TRANSLATION	protein_coding	stop	-	5	108	0	0	0	67.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031860	Pbx4	ENSMUST00000132899	ENSMUSP00000118287	TRANSLATION	nonsense_mediated_decay	-	-	1	74	0	0	0	68.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000079042	Apela	ENSMUST00000142822	ENSMUSP00000140510	TRANSLATION	protein_coding	-	CCDS80883.1	1	54	0	0	6.1	0	0	0,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000079042	Apela	ENSMUST00000124790	ENSMUSP00000139425	TRANSLATION	protein_coding	-	CCDS80883.1	2	54	0	0	6.1	0	0	0,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000070047	Fat1	ENSMUST00000191428	ENSMUSP00000140596	TRANSLATION	protein_coding	-	CCDS52547.1	5	4590	248	12.87	6.3	1753.2	0	3,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000070047	Fat1	ENSMUST00000215588	ENSMUSP00000149194	TRANSLATION	protein_coding	-	-	5	4645	248	12.87	0.5	1749	0	3,-2	-	-	17.748	MINOR
ENSMUSG00000070047	Fat1	ENSMUST00000189367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070047	Fat1	ENSMUST00000189017	ENSMUSP00000140765	TRANSLATION	protein_coding	-	-	5	4602	248	12.87	5.1	1753.2	0	3,-2	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000070047	Fat1	ENSMUST00000098796	ENSMUSP00000096394	TRANSLATION	protein_coding	-	CCDS52547.1	5	4590	248	12.87	6.3	1753.2	0	3,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000070047	Fat1	ENSMUST00000186342	ENSMUSP00000139921	TRANSLATION	nonsense_mediated_decay	start	-	1	159	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039375	Wdr17	ENSMUST00000153074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039375	Wdr17	ENSMUST00000126316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039375	Wdr17	ENSMUST00000129132	ENSMUSP00000134935	TRANSLATION	protein_coding	-	-	1	279	0	1.4	0	13.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000039375	Wdr17	ENSMUST00000144711	ENSMUSP00000117710	TRANSLATION	protein_coding	-	CCDS22309.2	1	1297	0	7.525	1.5	124.5	0	-4,-5	-	-	12.094	PRINCIPAL:3
ENSMUSG00000039375	Wdr17	ENSMUST00000148408	ENSMUSP00000135523	TRANSLATION	protein_coding	stop	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039375	Wdr17	ENSMUST00000175915	ENSMUSP00000135805	TRANSLATION	protein_coding	-	-	5	1283	0	7.565	2.4	124.5	0	-4,-6	-	-	12.483	ALTERNATIVE:2
ENSMUSG00000039375	Wdr17	ENSMUST00000127511	ENSMUSP00000115550	TRANSLATION	protein_coding	-	-	5	1322	0	7.565	1.2	124.5	0	-4,-5	-	-	12.069	ALTERNATIVE:2
ENSMUSG00000039375	Wdr17	ENSMUST00000128850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039375	Wdr17	ENSMUST00000176180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039375	Wdr17	ENSMUST00000144482	ENSMUSP00000134950	TRANSLATION	protein_coding	start/stop	-	3	246	0	3.805	0	38.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039375	Wdr17	ENSMUST00000176866	ENSMUSP00000134978	TRANSLATION	protein_coding	stop	-	5	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039375	Wdr17	ENSMUST00000148806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039375	Wdr17	ENSMUST00000150488	ENSMUSP00000122326	TRANSLATION	protein_coding	-	CCDS52551.1	1	1290	0	7.565	3.9	124.5	0	-4,-6	-	-	13	ALTERNATIVE:2
ENSMUSG00000031897	Psmb10	ENSMUST00000212876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031897	Psmb10	ENSMUST00000212938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031897	Psmb10	ENSMUST00000034369	ENSMUSP00000034369	TRANSLATION	protein_coding	-	CCDS22621.1	1	273	4	6.6	7.5	213.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031897	Psmb10	ENSMUST00000212044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031897	Psmb10	ENSMUST00000212332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031897	Psmb10	ENSMUST00000212595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031897	Psmb10	ENSMUST00000212686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031762	Mt2	ENSMUST00000034214	ENSMUSP00000034214	TRANSLATION	protein_coding	-	CCDS40437.1	1	61	7	1.83	7.5	68.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031762	Mt2	ENSMUST00000212806	ENSMUSP00000148308	TRANSLATION	protein_coding	-	-	2	76	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000063626	Unc5d	ENSMUST00000209401	ENSMUSP00000148043	TRANSLATION	protein_coding	-	CCDS85523.1	1	882	0	14.418	1.5	431.9	5	0,-5	-	-	7.986	MINOR
ENSMUSG00000063626	Unc5d	ENSMUST00000210298	ENSMUSP00000148236	TRANSLATION	protein_coding	-	CCDS85522.1	1	875	0	13.668	0.5	304.4	5	0,-5	-	-	2.502	MINOR
ENSMUSG00000063626	Unc5d	ENSMUST00000210785	ENSMUSP00000147721	TRANSLATION	protein_coding	-	CCDS85524.1	1	938	3	15.418	1.5	465.5	5	0,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000063626	Unc5d	ENSMUST00000211448	ENSMUSP00000147306	TRANSLATION	protein_coding	-	CCDS85521.1	1	884	0	14.22	0.5	431.9	5	0,-5	-	-	7.59	MINOR
ENSMUSG00000063626	Unc5d	ENSMUST00000168630	ENSMUSP00000128521	TRANSLATION	protein_coding	-	CCDS40314.1	1	956	3	15.418	1.5	465.5	5	0,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000031952	Chst5	ENSMUST00000034430	ENSMUSP00000034430	TRANSLATION	protein_coding	-	CCDS22682.1	1	395	0	0	6.3	81.4	0	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000033192	Lpcat2	ENSMUST00000210099	ENSMUSP00000147941	TRANSLATION	protein_coding	-	-	1	504	10	2.14	0	36.8	2	-4,-6	-	-	14.712	MINOR
ENSMUSG00000033192	Lpcat2	ENSMUST00000151106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033192	Lpcat2	ENSMUST00000209265	ENSMUSP00000148089	TRANSLATION	nonsense_mediated_decay	-	-	1	236	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000033192	Lpcat2	ENSMUST00000046290	ENSMUSP00000049252	TRANSLATION	protein_coding	-	CCDS22524.1	1	544	10	2.14	3.9	81.4	2	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000033192	Lpcat2	ENSMUST00000130471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063900	Adam26b	ENSMUST00000080135	ENSMUSP00000079032	TRANSLATION	protein_coding	-	CCDS22268.1	1	699	25	0.48	0.5	416.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031620	Iqcm	ENSMUST00000034033	ENSMUSP00000034033	TRANSLATION	protein_coding	-	CCDS52603.1	1	489	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031620	Iqcm	ENSMUST00000212704	ENSMUSP00000148495	TRANSLATION	protein_coding	-	CCDS52603.1	1	489	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031620	Iqcm	ENSMUST00000121983	ENSMUSP00000112901	TRANSLATION	protein_coding	-	CCDS52603.1	1	489	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000025809	Itgb1	ENSMUST00000124826	ENSMUSP00000120026	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0.9	0	33.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025809	Itgb1	ENSMUST00000090006	ENSMUSP00000087457	TRANSLATION	protein_coding	-	CCDS22791.1	1	798	13	14.2	7.5	606.9	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000025809	Itgb1	ENSMUST00000149116	ENSMUSP00000119699	TRANSLATION	protein_coding	start	-	1	112	0	2.55	0	117.1	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000025809	Itgb1	ENSMUST00000135281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031848	Lsm4	ENSMUST00000153689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031848	Lsm4	ENSMUST00000146972	ENSMUSP00000121019	TRANSLATION	protein_coding	stop	-	5	96	5	2.28	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031848	Lsm4	ENSMUST00000210071	ENSMUSP00000147320	TRANSLATION	protein_coding	-	-	5	103	3	2.74	1.3	0	0	-4,-5	-	-	6.6	MINOR
ENSMUSG00000031848	Lsm4	ENSMUST00000210987	ENSMUSP00000147637	TRANSLATION	protein_coding	-	-	5	105	3	2.58	0	0	0	-4,-5	-	-	6.18	MINOR
ENSMUSG00000031848	Lsm4	ENSMUST00000034311	ENSMUSP00000034311	TRANSLATION	protein_coding	-	CCDS40374.1	1	138	5	3.99	9.7	60.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000047264	Zfp358	ENSMUST00000207318	ENSMUSP00000147158	TRANSLATION	protein_coding	stop	-	2	167	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000047264	Zfp358	ENSMUST00000208423	ENSMUSP00000146953	TRANSLATION	protein_coding	-	CCDS40205.1	-	571	36	0.6	0.5	179.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047264	Zfp358	ENSMUST00000061508	ENSMUSP00000060344	TRANSLATION	protein_coding	-	CCDS40205.1	1	571	36	0.6	0.5	179.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000071176	Arhgef10	ENSMUST00000162444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071176	Arhgef10	ENSMUST00000084207	ENSMUSP00000081225	TRANSLATION	protein_coding	-	CCDS40240.1	1	1345	0	4.68	0.5	136.2	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000071176	Arhgef10	ENSMUST00000162636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071176	Arhgef10	ENSMUST00000161162	ENSMUSP00000125606	TRANSLATION	protein_coding	stop	-	1	579	0	3.63	0	134.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071176	Arhgef10	ENSMUST00000110800	ENSMUSP00000106424	TRANSLATION	protein_coding	-	CCDS40241.1	1	1306	0	4.68	0.5	136.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071176	Arhgef10	ENSMUST00000160619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071176	Arhgef10	ENSMUST00000163062	ENSMUSP00000125526	TRANSLATION	protein_coding	start	-	5	988	0	4.68	0	136.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000030465	Psd3	ENSMUST00000038959	ENSMUSP00000041339	TRANSLATION	protein_coding	-	-	5	1005	4	6.25	0.5	277.1	0	-4,-5	-	-	15.484	ALTERNATIVE:2
ENSMUSG00000030465	Psd3	ENSMUST00000178529	ENSMUSP00000148427	TRANSLATION	protein_coding	stop	-	5	276	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000030465	Psd3	ENSMUST00000145595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030465	Psd3	ENSMUST00000146480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030465	Psd3	ENSMUST00000093469	ENSMUSP00000091179	TRANSLATION	protein_coding	-	-	5	1004	4	6.25	0.5	276.7	0	-4,-5	-	-	15.46	ALTERNATIVE:2
ENSMUSG00000030465	Psd3	ENSMUST00000098696	ENSMUSP00000096293	TRANSLATION	protein_coding	-	CCDS40355.2	1	1004	4	6.35	0.5	276.7	0	-4,-5	-	-	15.658	ALTERNATIVE:2
ENSMUSG00000030465	Psd3	ENSMUST00000150169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030465	Psd3	ENSMUST00000212505	ENSMUSP00000148401	TRANSLATION	protein_coding	-	-	5	1035	4	6.25	0.5	282.4	0	-4,-6	-	-	15.802	ALTERNATIVE:2
ENSMUSG00000030465	Psd3	ENSMUST00000212960	ENSMUSP00000148783	TRANSLATION	protein_coding	-	-	5	1289	4	6.25	0.5	282.4	0	-4,-6	-	-	15.802	ALTERNATIVE:2
ENSMUSG00000030465	Psd3	ENSMUST00000093468	ENSMUSP00000091178	TRANSLATION	protein_coding	-	CCDS22340.1	1	518	4	6.25	1.5	282.4	0	-4,-5	-	-	15.802	PRINCIPAL:3
ENSMUSG00000030465	Psd3	ENSMUST00000059374	ENSMUSP00000060306	TRANSLATION	protein_coding	-	-	1	390	4	3.27	0	144.6	0	-4,-2	-	-	4	MINOR
ENSMUSG00000030465	Psd3	ENSMUST00000212994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030465	Psd3	ENSMUST00000185416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030465	Psd3	ENSMUST00000120071	ENSMUSP00000112545	TRANSLATION	protein_coding	-	CCDS52563.1	1	376	4	2.95	1.5	144.6	0	-4,-2	-	-	4	MINOR
ENSMUSG00000030465	Psd3	ENSMUST00000130307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039842	Mcph1	ENSMUST00000153133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039842	Mcph1	ENSMUST00000141244	ENSMUSP00000119267	TRANSLATION	protein_coding	start	-	3	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039842	Mcph1	ENSMUST00000146819	ENSMUSP00000131616	TRANSLATION	protein_coding	-	-	1	600	0	3.05	0	532.5	0	-4,-5	-	-	4.218	MINOR
ENSMUSG00000039842	Mcph1	ENSMUST00000133417	ENSMUSP00000121636	TRANSLATION	protein_coding	start/stop	-	3	256	0	0	0	141.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039842	Mcph1	ENSMUST00000039412	ENSMUSP00000037000	TRANSLATION	protein_coding	-	CCDS22124.1	1	822	0	6.8	0.5	562.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039842	Mcph1	ENSMUST00000124910	ENSMUSP00000131698	TRANSLATION	nonsense_mediated_decay	-	-	1	133	0	3.05	0	63	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053687	Dpep2	ENSMUST00000150001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053687	Dpep2	ENSMUST00000117555	ENSMUSP00000113877	TRANSLATION	protein_coding	-	CCDS80925.1	1	385	5	6.79	0.5	353.7	0	-4,-7	-	-	15.18	MINOR
ENSMUSG00000053687	Dpep2	ENSMUST00000034373	ENSMUSP00000034373	TRANSLATION	protein_coding	-	CCDS80926.1	1	478	7	6.79	0.5	372.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000053687	Dpep2	ENSMUST00000149057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031757	Mt4	ENSMUST00000034207	ENSMUSP00000034207	TRANSLATION	protein_coding	-	CCDS40435.1	1	62	7	1.731	12.8	72.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036934	4921524J17Rik	ENSMUST00000209355	ENSMUSP00000147531	TRANSLATION	nonsense_mediated_decay	-	-	1	40	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036934	4921524J17Rik	ENSMUST00000210556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036934	4921524J17Rik	ENSMUST00000047749	ENSMUSP00000040975	TRANSLATION	protein_coding	-	CCDS22498.1	1	154	4	0	10.8	43.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038005	Hpf1	ENSMUST00000134886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038005	Hpf1	ENSMUST00000209553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038005	Hpf1	ENSMUST00000149267	ENSMUSP00000118277	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038005	Hpf1	ENSMUST00000211016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038005	Hpf1	ENSMUST00000146863	ENSMUSP00000117164	TRANSLATION	protein_coding	-	-	2	35	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000038005	Hpf1	ENSMUST00000037190	ENSMUSP00000047235	TRANSLATION	protein_coding	-	CCDS52553.1	1	346	0	0	2.9	377.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038005	Hpf1	ENSMUST00000136098	ENSMUSP00000119448	TRANSLATION	nonsense_mediated_decay	-	-	3	89	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036598	Ccdc113	ENSMUST00000041569	ENSMUSP00000049497	TRANSLATION	protein_coding	-	CCDS22563.1	1	377	0	0	1.5	152.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044748	Defb1	ENSMUST00000051017	ENSMUSP00000051754	TRANSLATION	protein_coding	-	CCDS40282.1	1	69	3	1	3.9	42.6	0	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000005410	Mcm5	ENSMUST00000164309	ENSMUSP00000126135	TRANSLATION	protein_coding	-	CCDS22424.1	1	734	15	11.71	10.5	649.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005410	Mcm5	ENSMUST00000212811	ENSMUSP00000148525	TRANSLATION	protein_coding	-	CCDS22424.1	1	734	15	11.71	10.5	649.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005410	Mcm5	ENSMUST00000212648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005410	Mcm5	ENSMUST00000212426	ENSMUSP00000148648	TRANSLATION	protein_coding	-	CCDS22424.1	1	734	15	11.71	10.5	649.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005410	Mcm5	ENSMUST00000211912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090290	Tarbp1	ENSMUST00000170518	ENSMUSP00000129815	TRANSLATION	protein_coding	-	CCDS52710.1	5	1579	16	4	0.5	104.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071047	Ces1a	ENSMUST00000095211	ENSMUSP00000092836	TRANSLATION	protein_coding	-	CCDS22526.1	1	563	6	12.1	1.5	542.2	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000071047	Ces1a	ENSMUST00000209753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005150	Wdr83	ENSMUST00000131909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000152186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000136696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000149050	ENSMUSP00000121568	TRANSLATION	nonsense_mediated_decay	-	-	5	130	0	3.05	0	54.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005150	Wdr83	ENSMUST00000135463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000145880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000093357	ENSMUSP00000091048	TRANSLATION	protein_coding	-	CCDS22493.1	1	315	0	7.52	11.7	98.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000005150	Wdr83	ENSMUST00000142201	ENSMUSP00000122737	TRANSLATION	protein_coding	start	-	2	55	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005150	Wdr83	ENSMUST00000146900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005150	Wdr83	ENSMUST00000152785	ENSMUSP00000122127	TRANSLATION	protein_coding	stop	-	3	262	0	6.37	0	72.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046794	Ppp1r3b	ENSMUST00000210337	ENSMUSP00000147736	TRANSLATION	protein_coding	-	CCDS22243.1	2	284	0	1	7.5	121	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000046794	Ppp1r3b	ENSMUST00000211648	ENSMUSP00000147633	TRANSLATION	protein_coding	-	CCDS22243.1	3	284	0	1	7.5	121	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000046794	Ppp1r3b	ENSMUST00000070481	ENSMUSP00000065679	TRANSLATION	protein_coding	-	CCDS22243.1	1	284	0	1	7.5	121	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000046794	Ppp1r3b	ENSMUST00000211472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031604	Msmo1	ENSMUST00000145216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031604	Msmo1	ENSMUST00000147419	ENSMUSP00000117545	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000031604	Msmo1	ENSMUST00000140861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031604	Msmo1	ENSMUST00000135943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031604	Msmo1	ENSMUST00000132013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031604	Msmo1	ENSMUST00000141021	ENSMUSP00000121070	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000031604	Msmo1	ENSMUST00000034015	ENSMUSP00000034015	TRANSLATION	protein_coding	-	CCDS22328.1	1	293	0	0	9.8	98.8	2	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000036469	Marchf1	ENSMUST00000110256	ENSMUSP00000105885	TRANSLATION	protein_coding	-	-	5	540	8	1.45	0	57.8	4	-4,-7	-	-	18	MINOR
ENSMUSG00000036469	Marchf1	ENSMUST00000110255	ENSMUSP00000105884	TRANSLATION	protein_coding	-	CCDS52560.1	1	285	8	1.45	5.4	57.8	4	-4,-7	-	-	20.064	PRINCIPAL:3
ENSMUSG00000036469	Marchf1	ENSMUST00000098708	ENSMUSP00000096305	TRANSLATION	protein_coding	-	CCDS52560.1	5	285	8	1.45	5.4	57.8	4	-4,-7	-	-	20.064	PRINCIPAL:3
ENSMUSG00000036469	Marchf1	ENSMUST00000155804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036469	Marchf1	ENSMUST00000178982	ENSMUSP00000136545	TRANSLATION	protein_coding	-	CCDS80884.1	5	289	8	1.45	7.4	57.8	4	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000036469	Marchf1	ENSMUST00000039540	ENSMUSP00000044070	TRANSLATION	protein_coding	-	CCDS52561.1	1	275	8	1.45	0.5	57.8	4	-4,-6	-	-	18	MINOR
ENSMUSG00000036469	Marchf1	ENSMUST00000072482	ENSMUSP00000072302	TRANSLATION	protein_coding	-	CCDS22333.1	5	285	8	1.45	2.7	57.8	4	-4,-6	-	-	18.798	MINOR
ENSMUSG00000036469	Marchf1	ENSMUST00000152320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036469	Marchf1	ENSMUST00000110258	ENSMUSP00000105887	TRANSLATION	protein_coding	-	CCDS80884.1	5	289	8	1.45	7.4	57.8	4	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000036469	Marchf1	ENSMUST00000110259	ENSMUSP00000105888	TRANSLATION	protein_coding	-	CCDS22333.1	1	285	8	1.45	2.7	57.8	4	-4,-6	-	-	18.798	MINOR
ENSMUSG00000036469	Marchf1	ENSMUST00000110253	ENSMUSP00000105882	TRANSLATION	protein_coding	-	-	1	279	8	1.45	0.5	57.8	4	-4,-6	-	-	18	MINOR
ENSMUSG00000031775	Pllp	ENSMUST00000212555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031775	Pllp	ENSMUST00000034227	ENSMUSP00000034227	TRANSLATION	protein_coding	-	CCDS22546.1	1	182	0	0	7.5	69.9	4	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000031775	Pllp	ENSMUST00000213043	ENSMUSP00000148729	TRANSLATION	protein_coding	start	-	3	102	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000031616	Ednra	ENSMUST00000146561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031616	Ednra	ENSMUST00000034029	ENSMUSP00000034029	TRANSLATION	protein_coding	-	CCDS22427.1	1	427	0	4.84	5.1	119.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000110641	Gm45826	ENSMUST00000212965	ENSMUSP00000148505	TRANSLATION	nonsense_mediated_decay,RT	start	-	1	28	3	0	0	0	0	-3,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000110641	Gm45826	ENSMUST00000212226	ENSMUSP00000148411	TRANSLATION	protein_coding,RT	-	-	1	71	0	0	0	62	0	1,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000005470	Asf1b	ENSMUST00000124174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005470	Asf1b	ENSMUST00000005607	ENSMUSP00000005607	TRANSLATION	protein_coding	-	CCDS22462.1	1	202	0	3.8	1.5	238.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000005470	Asf1b	ENSMUST00000124913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056313	Tcim	ENSMUST00000052622	ENSMUSP00000058631	TRANSLATION	protein_coding	-	CCDS22194.1	-	106	0	0	10.3	124.5	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000033624	Pdpr	ENSMUST00000135302	ENSMUSP00000117570	TRANSLATION	protein_coding	stop	-	2	145	17	2	0	68.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033624	Pdpr	ENSMUST00000039333	ENSMUSP00000046639	TRANSLATION	protein_coding	-	CCDS22670.1	1	878	39	11.42	6.4	562.1	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000033624	Pdpr	ENSMUST00000144377	ENSMUSP00000121325	TRANSLATION	nonsense_mediated_decay	-	-	1	671	39	9.02	0	389.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000004994	Ccdc130	ENSMUST00000172320	ENSMUSP00000128605	TRANSLATION	nonsense_mediated_decay	-	-	5	69	2	0.92	0	104.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004994	Ccdc130	ENSMUST00000163993	ENSMUSP00000125894	TRANSLATION	protein_coding	stop	-	5	14	0	0.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004994	Ccdc130	ENSMUST00000166285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004994	Ccdc130	ENSMUST00000098578	ENSMUSP00000096177	TRANSLATION	protein_coding	-	CCDS40409.1	1	385	3	1.94	1.5	330.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000004994	Ccdc130	ENSMUST00000164476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004994	Ccdc130	ENSMUST00000166728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004994	Ccdc130	ENSMUST00000005120	ENSMUSP00000005120	TRANSLATION	protein_coding	-	CCDS80906.1	5	198	3	1.94	0.5	272.8	0	-4,-5	-	-	11.532	MINOR
ENSMUSG00000038000	Acd	ENSMUST00000042608	ENSMUSP00000048180	TRANSLATION	protein_coding	-	CCDS22608.1	1	416	0	6.63	0.5	75.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038000	Acd	ENSMUST00000212687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038000	Acd	ENSMUST00000212650	ENSMUSP00000148510	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	1.598	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038000	Acd	ENSMUST00000211870	ENSMUSP00000148285	TRANSLATION	nonsense_mediated_decay	-	-	1	136	0	3.63	0	75.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038000	Acd	ENSMUST00000212642	ENSMUSP00000148663	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	1.998	0	41	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074215	Gm10643	ENSMUST00000098592	ENSMUSP00000096191	TRANSLATION	protein_coding	-	-	-	111	2	0	0	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000031957	Ctrb1	ENSMUST00000034435	ENSMUSP00000034435	TRANSLATION	protein_coding	-	CCDS22679.1	1	263	5	5.5	6.3	242.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000031839	Hsbp1	ENSMUST00000034300	ENSMUSP00000034300	TRANSLATION	protein_coding	-	CCDS40492.1	1	76	0	2.05	15	98	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031839	Hsbp1	ENSMUST00000213037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031839	Hsbp1	ENSMUST00000212795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031839	Hsbp1	ENSMUST00000212468	ENSMUSP00000148390	TRANSLATION	protein_coding	-	CCDS40492.1	2	76	0	2.05	15	98	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031603	Fgf20	ENSMUST00000118639	ENSMUSP00000112756	TRANSLATION	protein_coding	-	-	3	157	7	2.2	0	116.1	0	-4,-1	-	-	13.758	MINOR
ENSMUSG00000031603	Fgf20	ENSMUST00000034014	ENSMUSP00000034014	TRANSLATION	protein_coding	-	CCDS52544.1	1	211	7	3	6.3	160.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000031576	Kcnu1	ENSMUST00000120653	ENSMUSP00000113442	TRANSLATION	protein_coding	-	-	1	381	0	6.35	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031576	Kcnu1	ENSMUST00000098858	ENSMUSP00000096457	TRANSLATION	protein_coding	-	CCDS52530.1	1	1121	0	23.73	0.5	171.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031576	Kcnu1	ENSMUST00000210273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031576	Kcnu1	ENSMUST00000126226	ENSMUSP00000123273	TRANSLATION	protein_coding	stop	-	3	160	0	3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033703	Fcsk	ENSMUST00000041382	ENSMUSP00000039271	TRANSLATION	protein_coding	-	CCDS22666.1	1	1090	12	2.72	1.5	387.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000033703	Fcsk	ENSMUST00000212568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033703	Fcsk	ENSMUST00000212242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033703	Fcsk	ENSMUST00000212971	ENSMUSP00000148787	TRANSLATION	nonsense_mediated_decay	-	-	1	462	0	0	0	283.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031821	Gins2	ENSMUST00000146526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031821	Gins2	ENSMUST00000034278	ENSMUSP00000034278	TRANSLATION	protein_coding	-	CCDS40496.1	1	185	0	5	15	82.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031821	Gins2	ENSMUST00000155609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031821	Gins2	ENSMUST00000126094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002908	Kcnn1	ENSMUST00000212084	ENSMUSP00000148487	TRANSLATION	protein_coding	start/stop	-	3	113	0	1.83	0	136.6	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000002908	Kcnn1	ENSMUST00000110081	ENSMUSP00000105708	TRANSLATION	protein_coding	-	-	5	539	0	3.79	0.5	327.3	7	-4,-5	-	-	11.49	ALTERNATIVE:2
ENSMUSG00000002908	Kcnn1	ENSMUST00000212509	ENSMUSP00000148705	TRANSLATION	protein_coding	-	-	5	535	0	3.79	0.5	335.8	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002908	Kcnn1	ENSMUST00000110078	ENSMUSP00000105705	TRANSLATION	protein_coding	-	CCDS52578.1	1	538	0	3.79	0.5	328.3	7	-4,-5	-	-	11.55	PRINCIPAL:2
ENSMUSG00000002908	Kcnn1	ENSMUST00000212086	ENSMUSP00000148615	TRANSLATION	protein_coding	-	-	1	581	0	3.79	0	328.3	7	-4,-6	-	-	11.55	ALTERNATIVE:2
ENSMUSG00000002908	Kcnn1	ENSMUST00000212414	ENSMUSP00000148760	TRANSLATION	protein_coding	stop	-	1	132	0	0	0	45.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000002908	Kcnn1	ENSMUST00000212611	ENSMUSP00000148544	TRANSLATION	protein_coding	-	CCDS52578.1	1	538	0	3.79	0.5	328.3	7	-4,-5	-	-	11.55	PRINCIPAL:2
ENSMUSG00000002908	Kcnn1	ENSMUST00000212243	ENSMUSP00000148482	TRANSLATION	nonsense_mediated_decay	start	-	3	157	0	2.96	0	121.4	5	2,-3	-	-	-1	MINOR
ENSMUSG00000031976	Urb2	ENSMUST00000034457	ENSMUSP00000034457	TRANSLATION	protein_coding	-	CCDS22768.1	1	1524	0	0	1.5	85	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031976	Urb2	ENSMUST00000173168	ENSMUSP00000133547	TRANSLATION	nonsense_mediated_decay	-	-	1	1296	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071165	Gm6040	ENSMUST00000095430	ENSMUSP00000093080	TRANSLATION	protein_coding	-	CCDS40262.1	1	63	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000008450	Nutf2	ENSMUST00000008594	ENSMUSP00000008594	TRANSLATION	protein_coding	-	CCDS22617.1	1	127	0	3.25	19.5	114.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000008450	Nutf2	ENSMUST00000212484	ENSMUSP00000148704	TRANSLATION	protein_coding	stop	-	3	61	0	1.5	0	55.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008450	Nutf2	ENSMUST00000212042	ENSMUSP00000148713	TRANSLATION	protein_coding	-	CCDS22617.1	3	127	0	3.25	19.5	114.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000008450	Nutf2	ENSMUST00000212200	ENSMUSP00000148471	TRANSLATION	protein_coding	stop	-	3	61	0	1.5	0	55.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008450	Nutf2	ENSMUST00000212610	ENSMUSP00000148696	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008450	Nutf2	ENSMUST00000212379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008450	Nutf2	ENSMUST00000212398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091813	Ces2h	ENSMUST00000172032	ENSMUSP00000126773	TRANSLATION	protein_coding	-	CCDS59742.1	5	558	6	8.9	1.5	548.3	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043668	Tox3	ENSMUST00000109621	ENSMUSP00000105250	TRANSLATION	protein_coding	-	CCDS22516.1	1	575	0	1.83	0.5	63.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043668	Tox3	ENSMUST00000176616	ENSMUSP00000135697	TRANSLATION	protein_coding	stop	-	5	309	0	1.33	0	50.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043668	Tox3	ENSMUST00000176034	ENSMUSP00000134931	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047171	Helt	ENSMUST00000058636	ENSMUSP00000054823	TRANSLATION	protein_coding	-	CCDS22290.1	1	240	0	1.88	5.2	95.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000047171	Helt	ENSMUST00000210652	ENSMUSP00000147465	TRANSLATION	protein_coding	-	-	1	202	0	1.13	1.2	55.7	0	-4,-5	-	-	7.206	MINOR
ENSMUSG00000047171	Helt	ENSMUST00000210696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031823	Zdhhc7	ENSMUST00000034280	ENSMUSP00000034280	TRANSLATION	protein_coding	-	CCDS22715.1	1	308	7	0	15.7	123.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031823	Zdhhc7	ENSMUST00000124044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031823	Zdhhc7	ENSMUST00000141886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031823	Zdhhc7	ENSMUST00000123186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031823	Zdhhc7	ENSMUST00000150444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038482	Tfdp1	ENSMUST00000209396	ENSMUSP00000147662	TRANSLATION	protein_coding	-	CCDS85506.1	1	290	0	6.1	1.5	296.8	0	-4,-5	-	-	10.206	MINOR
ENSMUSG00000038482	Tfdp1	ENSMUST00000210518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038482	Tfdp1	ENSMUST00000209282	ENSMUSP00000148051	TRANSLATION	protein_coding	stop	-	3	124	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038482	Tfdp1	ENSMUST00000209945	ENSMUSP00000147601	TRANSLATION	protein_coding	start/stop	-	2	183	0	3.75	0	175	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038482	Tfdp1	ENSMUST00000210501	ENSMUSP00000147536	TRANSLATION	nonsense_mediated_decay	-	-	5	106	0	0	2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038482	Tfdp1	ENSMUST00000211606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038482	Tfdp1	ENSMUST00000170909	ENSMUSP00000127952	TRANSLATION	protein_coding	-	CCDS22110.1	1	410	0	6.6	1.5	310	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038482	Tfdp1	ENSMUST00000209885	ENSMUSP00000147881	TRANSLATION	protein_coding	-	CCDS22110.1	1	410	0	6.6	1.5	310	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038482	Tfdp1	ENSMUST00000210165	ENSMUSP00000147345	TRANSLATION	protein_coding	stop	-	3	128	0	2.25	0	83.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040028	Elavl1	ENSMUST00000207615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040028	Elavl1	ENSMUST00000208987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040028	Elavl1	ENSMUST00000098950	ENSMUSP00000096549	TRANSLATION	protein_coding	-	CCDS22084.1	1	326	0	4.8	17	202.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040028	Elavl1	ENSMUST00000209010	ENSMUSP00000146866	TRANSLATION	protein_coding	-	CCDS22084.1	5	326	0	4.8	17	202.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001995	Sipa1l2	ENSMUST00000212168	ENSMUSP00000148557	TRANSLATION	protein_coding	-	-	1	1704	0	4.28	2.7	469.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000001995	Sipa1l2	ENSMUST00000212987	ENSMUSP00000148536	TRANSLATION	protein_coding	-	CCDS40518.1	5	1722	0	4.28	2.7	462	0	-4,-5	-	-	11.562	PRINCIPAL:2
ENSMUSG00000001995	Sipa1l2	ENSMUST00000108775	ENSMUSP00000104405	TRANSLATION	protein_coding	-	CCDS40518.1	1	1722	0	4.28	2.7	462	0	-4,-5	-	-	11.562	PRINCIPAL:2
ENSMUSG00000001995	Sipa1l2	ENSMUST00000212604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000019405	ENSMUSP00000019405	TRANSLATION	protein_coding	-	CCDS22387.1	1	973	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000019261	Map1s	ENSMUST00000213083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000212697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000212544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000212511	ENSMUSP00000148752	TRANSLATION	protein_coding	stop	-	3	133	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000019261	Map1s	ENSMUST00000211880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019261	Map1s	ENSMUST00000212227	ENSMUSP00000148554	TRANSLATION	nonsense_mediated_decay	-	-	1	864	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000019261	Map1s	ENSMUST00000212823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000212143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019261	Map1s	ENSMUST00000211910	ENSMUSP00000148822	TRANSLATION	nonsense_mediated_decay	-	-	2	79	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000019261	Map1s	ENSMUST00000213001	ENSMUSP00000148773	TRANSLATION	protein_coding	start/stop	-	5	239	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074441	Defa40	ENSMUST00000098895	ENSMUSP00000096494	TRANSLATION	protein_coding	-	CCDS52507.1	1	93	0	0	1.5	110.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031520	Vegfc	ENSMUST00000210831	ENSMUSP00000148210	TRANSLATION	protein_coding	-	-	1	184	0	1.6	0	64.2	0	2,-3	-	-	6.168	MINOR
ENSMUSG00000031520	Vegfc	ENSMUST00000209703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031520	Vegfc	ENSMUST00000033919	ENSMUSP00000033919	TRANSLATION	protein_coding	-	CCDS22306.1	1	415	0	2.6	3.9	122.9	0	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000031770	Herpud1	ENSMUST00000034220	ENSMUSP00000034220	TRANSLATION	protein_coding	-	-	1	390	0	2.43	5.1	50.6	2	-4,-5	-	-	13.652	ALTERNATIVE:1
ENSMUSG00000031770	Herpud1	ENSMUST00000161085	ENSMUSP00000148426	TRANSLATION	nonsense_mediated_decay	start	-	3	62	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031770	Herpud1	ENSMUST00000161576	ENSMUSP00000124201	TRANSLATION	protein_coding	-	CCDS22541.1	1	391	0	2.58	5.1	49.3	2	-4,-5	-	-	13.844	PRINCIPAL:2
ENSMUSG00000031770	Herpud1	ENSMUST00000159450	ENSMUSP00000148775	TRANSLATION	nonsense_mediated_decay	start	-	3	36	6	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031770	Herpud1	ENSMUST00000211982	ENSMUSP00000148581	TRANSLATION	protein_coding	start	-	5	179	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031770	Herpud1	ENSMUST00000160866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005469	Prkaca	ENSMUST00000005606	ENSMUSP00000005606	TRANSLATION	protein_coding	-	CCDS22463.1	1	351	24	9	15.5	244.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005469	Prkaca	ENSMUST00000211558	ENSMUSP00000147256	TRANSLATION	protein_coding	-	CCDS85574.1	5	343	24	8.83	5.1	244.6	0	-4,-5	-	-	18.79	MINOR
ENSMUSG00000071076	Jund	ENSMUST00000095267	ENSMUSP00000092901	TRANSLATION	protein_coding	-	CCDS40375.1	-	341	0	0.4	1.5	323.9	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000014633	Cmc2	ENSMUST00000128304	ENSMUSP00000120919	TRANSLATION	protein_coding	-	-	5	99	0	0	0	25.7	0	-4,-5	-	-	2.202	MINOR
ENSMUSG00000014633	Cmc2	ENSMUST00000078589	ENSMUSP00000077663	TRANSLATION	protein_coding	-	-	2	55	0	0	0	23.5	0	-4,-5	-	-	2.016	MINOR
ENSMUSG00000014633	Cmc2	ENSMUST00000131616	ENSMUSP00000121322	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	25.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014633	Cmc2	ENSMUST00000148235	ENSMUSP00000120966	TRANSLATION	protein_coding	-	CCDS40489.1	1	79	0	0	13.3	70	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000014633	Cmc2	ENSMUST00000155260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014633	Cmc2	ENSMUST00000134356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014633	Cmc2	ENSMUST00000150128	ENSMUSP00000120255	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031714	Gab1	ENSMUST00000210676	ENSMUSP00000147784	TRANSLATION	protein_coding	-	CCDS85569.1	1	725	8	0.84	5.3	77.1	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000031714	Gab1	ENSMUST00000211018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031714	Gab1	ENSMUST00000034150	ENSMUSP00000034150	TRANSLATION	protein_coding	-	CCDS22443.1	1	695	8	0.84	5.1	77.1	0	-4,-6	-	-	19.906	PRINCIPAL:3
ENSMUSG00000041679	Lrrc29	ENSMUST00000210801	ENSMUSP00000147408	TRANSLATION	protein_coding	-	-	1	56	0	0	0	35.9	0	-4,-7	-	-	2.832	MINOR
ENSMUSG00000041679	Lrrc29	ENSMUST00000210412	ENSMUSP00000147309	TRANSLATION	protein_coding	-	-	5	621	0	1.72	1.5	76	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041679	Lrrc29	ENSMUST00000209964	ENSMUSP00000147683	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	35.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041679	Lrrc29	ENSMUST00000211199	ENSMUSP00000147791	TRANSLATION	nonsense_mediated_decay	-	-	2	56	0	0	0	35.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041679	Lrrc29	ENSMUST00000070508	ENSMUSP00000063248	TRANSLATION	protein_coding	-	CCDS57641.1	1	166	0	1.02	0.5	20.8	0	-4,-2	-	-	5.202	MINOR
ENSMUSG00000006589	Aprt	ENSMUST00000213029	ENSMUSP00000148477	TRANSLATION	nonsense_mediated_decay	-	-	3	67	3	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006589	Aprt	ENSMUST00000213062	ENSMUSP00000148607	TRANSLATION	protein_coding	-	-	2	49	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000006589	Aprt	ENSMUST00000212834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006589	Aprt	ENSMUST00000213030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006589	Aprt	ENSMUST00000211823	ENSMUSP00000148745	TRANSLATION	protein_coding	-	-	3	49	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000006589	Aprt	ENSMUST00000213017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006589	Aprt	ENSMUST00000212093	ENSMUSP00000148652	TRANSLATION	protein_coding	-	-	2	49	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000006589	Aprt	ENSMUST00000006764	ENSMUSP00000006764	TRANSLATION	protein_coding	-	CCDS40503.1	1	180	17	5	8.8	0	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000006589	Aprt	ENSMUST00000211810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004677	Myo9b	ENSMUST00000168839	ENSMUSP00000131635	TRANSLATION	protein_coding	-	CCDS52581.1	5	1975	23	16.015	0.5	1013.3	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000004677	Myo9b	ENSMUST00000170242	ENSMUSP00000129220	TRANSLATION	protein_coding	-	CCDS52580.1	5	2128	23	16.015	0.5	1013.3	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000004677	Myo9b	ENSMUST00000212935	ENSMUSP00000148316	TRANSLATION	protein_coding	-	-	5	1963	23	16.015	0.5	1013.3	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000004677	Myo9b	ENSMUST00000212173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004677	Myo9b	ENSMUST00000212412	ENSMUSP00000148528	TRANSLATION	protein_coding	start	-	5	787	8	6.425	0	155.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004677	Myo9b	ENSMUST00000071935	ENSMUSP00000071827	TRANSLATION	protein_coding	-	CCDS40379.1	5	1961	23	15.715	0.5	1013.3	0	-4,-1	-	-	17.4	PRINCIPAL:3
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000189965	ENSMUSP00000140304	TRANSLATION	protein_coding	stop	-	3	82	2	1.85	0	69.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000079272	ENSMUSP00000078254	TRANSLATION	protein_coding	start	-	5	87	2	1.85	0.5	69.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000186619	ENSMUSP00000140654	TRANSLATION	protein_coding	-	-	2	410	49	2.45	0	297.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000190157	ENSMUSP00000140736	TRANSLATION	protein_coding	-	CCDS80947.1	1	88	2	1.85	0.5	69.3	0	-4,-5	-	-	4.53	MINOR
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000191043	ENSMUSP00000139392	TRANSLATION	protein_coding	-	-	2	95	0	1.75	0	69.3	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000071302	2610044O15Rik8	ENSMUST00000188757	ENSMUSP00000140555	TRANSLATION	protein_coding	-	-	2	88	2	1.85	0.5	69.3	0	-4,-5	-	-	4.53	MINOR
ENSMUSG00000031709	Tbc1d9	ENSMUST00000093393	ENSMUSP00000091093	TRANSLATION	protein_coding	-	CCDS52607.1	1	1264	5	4.52	5.1	289	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000031709	Tbc1d9	ENSMUST00000142673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031709	Tbc1d9	ENSMUST00000034145	ENSMUSP00000034145	TRANSLATION	protein_coding	-	CCDS22448.1	1	1031	5	4.52	0.5	158	0	-4,-7	-	-	11	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000110573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013878	Rnf170	ENSMUST00000153528	ENSMUSP00000118689	TRANSLATION	protein_coding	-	-	1	239	8	1.616	0	73.4	2	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000013878	Rnf170	ENSMUST00000110575	ENSMUSP00000106204	TRANSLATION	protein_coding	-	-	1	216	6	1.07	0	0	2	-4,-7	-	-	8.472	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000014022	ENSMUSP00000014022	TRANSLATION	protein_coding	-	CCDS22207.1	1	286	8	1.616	1.5	73.4	4	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000013878	Rnf170	ENSMUST00000110579	ENSMUSP00000106208	TRANSLATION	nonsense_mediated_decay	-	-	1	140	6	1.07	0	22.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000209300	ENSMUSP00000147842	TRANSLATION	protein_coding	-	-	1	142	5	1.07	0	0	2	-4,-7	-	-	7.722	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000140819	ENSMUSP00000119906	TRANSLATION	protein_coding	stop	-	3	135	5	0.27	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000209707	ENSMUSP00000147376	TRANSLATION	protein_coding	stop	-	1	249	8	1.616	0	35	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000124757	ENSMUSP00000115588	TRANSLATION	nonsense_mediated_decay	-	-	1	144	5	1.07	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000013878	Rnf170	ENSMUST00000124867	ENSMUSP00000115959	TRANSLATION	nonsense_mediated_decay	start	-	3	113	5	1.07	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000039530	Tusc3	ENSMUST00000209440	ENSMUSP00000148134	TRANSLATION	protein_coding	-	-	1	347	0	3.95	7.5	364.8	4	0,1	-	-	15	PRINCIPAL:1
ENSMUSG00000039530	Tusc3	ENSMUST00000169034	ENSMUSP00000129916	TRANSLATION	protein_coding	-	-	1	105	0	1.75	0	48.8	0	0,-4	-	-	1.602	MINOR
ENSMUSG00000039530	Tusc3	ENSMUST00000167992	ENSMUSP00000126080	TRANSLATION	protein_coding	-	CCDS85529.1	1	347	0	3.95	7.5	364.8	4	0,1	-	-	15	PRINCIPAL:1
ENSMUSG00000039530	Tusc3	ENSMUST00000211241	ENSMUSP00000148022	TRANSLATION	nonsense_mediated_decay	-	-	5	105	0	1.75	0	48.8	0	0,-4	-	-	-1	MINOR
ENSMUSG00000039530	Tusc3	ENSMUST00000209970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039530	Tusc3	ENSMUST00000210890	ENSMUSP00000147691	TRANSLATION	protein_coding	start/stop	-	3	196	0	3	0	234.6	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000040236	Trappc5	ENSMUST00000044857	ENSMUSP00000036541	TRANSLATION	protein_coding	-	CCDS22070.1	1	188	0	1	19.5	119.3	0	-1,2	-	-	16	PRINCIPAL:1
ENSMUSG00000040236	Trappc5	ENSMUST00000207787	ENSMUSP00000146674	TRANSLATION	protein_coding	-	CCDS22070.1	-	188	0	1	19.5	119.3	0	-1,2	-	-	16	PRINCIPAL:1
ENSMUSG00000046152	Fut10	ENSMUST00000066173	ENSMUSP00000069816	TRANSLATION	protein_coding	-	CCDS22223.1	1	481	7	0.2	1.5	162.7	0	-1,-5	-	-	17.904	PRINCIPAL:3
ENSMUSG00000046152	Fut10	ENSMUST00000110527	ENSMUSP00000106156	TRANSLATION	protein_coding	-	CCDS72111.1	1	136	0	0	0.5	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000046152	Fut10	ENSMUST00000161788	ENSMUSP00000124437	TRANSLATION	protein_coding	-	CCDS52536.1	1	436	7	0.2	0.5	164.3	0	-1,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000046152	Fut10	ENSMUST00000161502	ENSMUSP00000125265	TRANSLATION	protein_coding	-	CCDS22223.1	1	481	7	0.2	1.5	162.7	0	-1,-5	-	-	17.904	PRINCIPAL:3
ENSMUSG00000046152	Fut10	ENSMUST00000162162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079057	Cyp4v3	ENSMUST00000095328	ENSMUSP00000092966	TRANSLATION	protein_coding	-	CCDS22276.1	1	525	31	7.1	1.5	407.9	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000031809	1700018B08Rik	ENSMUST00000182739	ENSMUSP00000138269	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031809	1700018B08Rik	ENSMUST00000183280	ENSMUSP00000138141	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000031809	1700018B08Rik	ENSMUST00000034265	ENSMUSP00000034265	TRANSLATION	protein_coding	-	CCDS52692.1	1	213	0	0	0.5	381.8	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000031809	1700018B08Rik	ENSMUST00000182460	ENSMUSP00000138106	TRANSLATION	protein_coding	stop	-	5	188	0	0	0	282.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040459	Arglu1	ENSMUST00000208252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040459	Arglu1	ENSMUST00000048545	ENSMUSP00000039493	TRANSLATION	protein_coding	-	CCDS40215.1	2	271	0	0	8.8	175.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000040459	Arglu1	ENSMUST00000207817	ENSMUSP00000146939	TRANSLATION	nonsense_mediated_decay	start	-	5	215	0	0	0	73.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040459	Arglu1	ENSMUST00000207070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094362	Defa33	ENSMUST00000120874	ENSMUSP00000129593	TRANSLATION	protein_coding	-	CCDS57611.1	1	95	0	1	0.5	78.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000062007	Hsh2d	ENSMUST00000072097	ENSMUSP00000071970	TRANSLATION	protein_coding	-	CCDS22410.1	1	334	0	2.8	1.5	54.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062007	Hsh2d	ENSMUST00000165324	ENSMUSP00000127575	TRANSLATION	protein_coding	-	CCDS22410.1	1	334	0	2.8	1.5	54.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001670	Tat	ENSMUST00000143741	ENSMUSP00000119061	TRANSLATION	protein_coding	stop	-	3	233	7	4.75	0	204	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001670	Tat	ENSMUST00000001720	ENSMUSP00000001720	TRANSLATION	protein_coding	-	CCDS22658.1	1	454	14	10	4	333.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000005483	Dnajb1	ENSMUST00000005620	ENSMUSP00000005620	TRANSLATION	protein_coding	-	CCDS22456.1	1	340	0	3.15	8.8	244.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005483	Dnajb1	ENSMUST00000212300	ENSMUSP00000148685	TRANSLATION	protein_coding	-	CCDS85571.1	1	240	0	2	6.4	150.3	0	-4,-5	-	-	6.12	MINOR
ENSMUSG00000002190	Clgn	ENSMUST00000109831	ENSMUSP00000105457	TRANSLATION	protein_coding	-	CCDS22452.1	1	611	4	8.05	1.5	524.2	1	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000002190	Clgn	ENSMUST00000002259	ENSMUSP00000002259	TRANSLATION	protein_coding	-	CCDS22452.1	1	611	4	8.05	1.5	524.2	1	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000004567	Mcoln1	ENSMUST00000160338	ENSMUSP00000123717	TRANSLATION	protein_coding	stop	-	5	90	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000004567	Mcoln1	ENSMUST00000208359	ENSMUSP00000146727	TRANSLATION	protein_coding	start	-	5	130	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000004567	Mcoln1	ENSMUST00000161842	ENSMUSP00000146598	TRANSLATION	protein_coding	start	-	1	115	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000004567	Mcoln1	ENSMUST00000208739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004567	Mcoln1	ENSMUST00000162797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004567	Mcoln1	ENSMUST00000159538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004567	Mcoln1	ENSMUST00000208943	ENSMUSP00000146452	TRANSLATION	protein_coding	start	-	5	94	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000004567	Mcoln1	ENSMUST00000208306	ENSMUSP00000146575	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004567	Mcoln1	ENSMUST00000159808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004567	Mcoln1	ENSMUST00000004683	ENSMUSP00000004683	TRANSLATION	protein_coding	-	CCDS22063.1	1	580	0	5	7.5	38.2	7	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000004567	Mcoln1	ENSMUST00000161705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053626	Tll1	ENSMUST00000210256	ENSMUSP00000147695	TRANSLATION	protein_coding	stop	-	1	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053626	Tll1	ENSMUST00000211755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053626	Tll1	ENSMUST00000066166	ENSMUSP00000070560	TRANSLATION	protein_coding	-	CCDS40352.1	1	1013	33	14.1	7.6	906.5	0	1,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000053626	Tll1	ENSMUST00000209451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078144	Capns2	ENSMUST00000104947	ENSMUSP00000100553	TRANSLATION	protein_coding	-	CCDS52634.1	-	247	24	1	6.3	44.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031446	Cul4a	ENSMUST00000135371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031446	Cul4a	ENSMUST00000016680	ENSMUSP00000016680	TRANSLATION	protein_coding	-	CCDS52485.1	1	759	0	19.25	3.9	790.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031446	Cul4a	ENSMUST00000139316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031446	Cul4a	ENSMUST00000141315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031446	Cul4a	ENSMUST00000125646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031446	Cul4a	ENSMUST00000142700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031446	Cul4a	ENSMUST00000121426	ENSMUSP00000112525	TRANSLATION	protein_coding	-	-	1	265	0	7.066	0	164.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031446	Cul4a	ENSMUST00000125514	ENSMUSP00000123074	TRANSLATION	nonsense_mediated_decay	start	-	1	87	0	2	0	45.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031985	Gnpat	ENSMUST00000161628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031985	Gnpat	ENSMUST00000034466	ENSMUSP00000034466	TRANSLATION	protein_coding	-	CCDS22776.1	1	678	0	0	2.7	82.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031985	Gnpat	ENSMUST00000162455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031985	Gnpat	ENSMUST00000159864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031985	Gnpat	ENSMUST00000162192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031985	Gnpat	ENSMUST00000161986	ENSMUSP00000125323	TRANSLATION	protein_coding	stop	-	1	585	0	0	0	81.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031949	Adat1	ENSMUST00000120457	ENSMUSP00000113201	TRANSLATION	protein_coding	-	-	5	354	13	2.01	0	290.6	0	-4,-5	-	-	7.332	MINOR
ENSMUSG00000031949	Adat1	ENSMUST00000034427	ENSMUSP00000034427	TRANSLATION	protein_coding	-	CCDS22684.1	1	499	20	2.01	1.5	402	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031949	Adat1	ENSMUST00000139820	ENSMUSP00000117279	TRANSLATION	protein_coding	-	-	1	454	14	2.01	0	366.8	0	-4,-5	-	-	11.886	MINOR
ENSMUSG00000047710	Champ1	ENSMUST00000128557	ENSMUSP00000120117	TRANSLATION	protein_coding	-	CCDS22116.1	1	802	13	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047710	Champ1	ENSMUST00000051870	ENSMUSP00000057270	TRANSLATION	protein_coding	-	CCDS22116.1	1	802	13	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025519	Tktl2	ENSMUST00000183187	ENSMUSP00000138388	TRANSLATION	protein_coding	-	CCDS22334.1	1	627	25	1	5.1	294.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025519	Tktl2	ENSMUST00000002025	ENSMUSP00000002025	TRANSLATION	protein_coding	-	CCDS22334.1	-	627	25	1	5.1	294.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031505	Naxd	ENSMUST00000178364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031505	Naxd	ENSMUST00000177955	ENSMUSP00000136363	TRANSLATION	protein_coding	-	CCDS57604.1	1	327	15	4.52	5.3	201.1	0	-3,0	-	-	20	PRINCIPAL:1
ENSMUSG00000031505	Naxd	ENSMUST00000210316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031505	Naxd	ENSMUST00000033901	ENSMUSP00000033901	TRANSLATION	protein_coding	-	CCDS22096.2	2	365	15	4.52	0.5	201.1	0	-2,-5	-	-	18	MINOR
ENSMUSG00000031505	Naxd	ENSMUST00000178817	ENSMUSP00000137488	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0.9	0	22.5	0	-3,0	-	-	-1	MINOR
ENSMUSG00000031505	Naxd	ENSMUST00000209932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031505	Naxd	ENSMUST00000178382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031505	Naxd	ENSMUST00000180269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031505	Naxd	ENSMUST00000178721	ENSMUSP00000136535	TRANSLATION	protein_coding	-	CCDS80857.1	5	272	4	3.14	0.5	153.1	0	-3,0	-	-	6.36	MINOR
ENSMUSG00000074063	Osgin1	ENSMUST00000212112	ENSMUSP00000148734	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074063	Osgin1	ENSMUST00000131448	ENSMUSP00000120477	TRANSLATION	protein_coding	stop	-	3	122	6	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074063	Osgin1	ENSMUST00000098365	ENSMUSP00000095968	TRANSLATION	protein_coding	-	-	1	172	6	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000074063	Osgin1	ENSMUST00000145604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074063	Osgin1	ENSMUST00000126414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074063	Osgin1	ENSMUST00000144381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074063	Osgin1	ENSMUST00000152420	ENSMUSP00000114467	TRANSLATION	protein_coding	-	CCDS22704.1	1	478	23	0	2.7	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000005540	Fcer2a	ENSMUST00000208492	ENSMUSP00000146568	TRANSLATION	protein_coding	-	CCDS85494.1	1	330	13	3.515	0.5	90.3	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000005540	Fcer2a	ENSMUST00000208603	ENSMUSP00000146380	TRANSLATION	protein_coding	-	CCDS85492.1	1	309	13	3.515	0.5	90.3	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000005540	Fcer2a	ENSMUST00000207463	ENSMUSP00000147052	TRANSLATION	protein_coding	stop	-	1	287	13	3.515	0.5	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005540	Fcer2a	ENSMUST00000005678	ENSMUSP00000005678	TRANSLATION	protein_coding	-	CCDS22071.1	1	331	13	3.515	1.5	90.3	2	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000005540	Fcer2a	ENSMUST00000208438	ENSMUSP00000146822	TRANSLATION	protein_coding	-	CCDS85493.1	1	309	13	3.515	0.5	90.3	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000005540	Fcer2a	ENSMUST00000207635	ENSMUSP00000146689	TRANSLATION	protein_coding	stop	-	1	300	13	3.515	0.5	90.3	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000005540	Fcer2a	ENSMUST00000208145	ENSMUSP00000146647	TRANSLATION	protein_coding	-	CCDS85491.1	1	330	13	3.515	0.5	90.3	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000005540	Fcer2a	ENSMUST00000207327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050097	Ces2b	ENSMUST00000059449	ENSMUSP00000063005	TRANSLATION	protein_coding	-	CCDS22586.1	1	556	6	9.33	0.5	564.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000050097	Ces2b	ENSMUST00000163042	ENSMUSP00000124796	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0.27	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000036437	Npy1r	ENSMUST00000039303	ENSMUSP00000045530	TRANSLATION	protein_coding	-	CCDS22336.1	1	382	0	1.2	7.5	181.9	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000036437	Npy1r	ENSMUST00000212588	ENSMUSP00000148417	TRANSLATION	protein_coding	-	CCDS22336.1	5	382	0	1.2	7.5	181.9	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000033763	Mtss2	ENSMUST00000141302	ENSMUSP00000116518	TRANSLATION	protein_coding	start/stop	-	5	364	0	2.95	0	181.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033763	Mtss2	ENSMUST00000144041	ENSMUSP00000115220	TRANSLATION	protein_coding	-	CCDS80930.1	1	653	0	4.53	0.5	272.5	0	-4,-2	-	-	3.474	MINOR
ENSMUSG00000033763	Mtss2	ENSMUST00000133848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033763	Mtss2	ENSMUST00000052457	ENSMUSP00000050211	TRANSLATION	protein_coding	-	CCDS22664.1	1	715	0	6.53	1.5	347.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033763	Mtss2	ENSMUST00000149273	ENSMUSP00000119495	TRANSLATION	protein_coding	start/stop	-	3	289	0	2.95	0	189.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033763	Mtss2	ENSMUST00000141527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115768	Dpep2nb	ENSMUST00000227778	ENSMUSP00000153824	TRANSLATION	protein_coding	-	-	-	118	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000110444	Gm10033	ENSMUST00000213012	ENSMUSP00000159301	TRANSLATION	protein_coding	-	-	3	128	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000110444	Gm10033	ENSMUST00000239413	ENSMUSP00000159370	TRANSLATION	protein_coding	-	-	-	217	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000110444	Gm10033	ENSMUST00000211874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110444	Gm10033	ENSMUST00000072427	ENSMUSP00000159375	TRANSLATION	protein_coding	-	-	-	822	94	4.98	0	527.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000110444	Gm10033	ENSMUST00000239492	ENSMUSP00000159343	TRANSLATION	protein_coding	start	-	-	128	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000110444	Gm10033	ENSMUST00000239456	ENSMUSP00000159337	TRANSLATION	protein_coding	-	-	-	858	94	4.98	0	527	0	-4,-6	-	-	17.982	PRINCIPAL:5
ENSMUSG00000110444	Gm10033	ENSMUST00000211954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031467	Agpat5	ENSMUST00000149565	ENSMUSP00000117025	TRANSLATION	protein_coding	-	CCDS22126.1	1	365	0	0	1.5	120.8	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000031467	Agpat5	ENSMUST00000033847	ENSMUSP00000033847	TRANSLATION	protein_coding	-	-	1	291	0	0	0	104.7	0	0,-3	-	-	5.034	MINOR
ENSMUSG00000065952	Rps23rg1	ENSMUST00000136592	ENSMUSP00000123235	TRANSLATION	protein_coding	-	CCDS52468.1	1	141	0	0	0.5	0	1	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000065952	Rps23rg1	ENSMUST00000138454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065952	Rps23rg1	ENSMUST00000153341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065952	Rps23rg1	ENSMUST00000151633	ENSMUSP00000119487	TRANSLATION	protein_coding	-	-	1	117	0	0	0	0	1	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000065952	Rps23rg1	ENSMUST00000086479	ENSMUSP00000136628	TRANSLATION	protein_coding	-	CCDS52468.1	5	141	0	0	0.5	0	1	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000036840	Siah1a	ENSMUST00000045296	ENSMUSP00000044123	TRANSLATION	protein_coding	-	CCDS22504.1	1	282	15	1	17	302.9	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000031509	1700016D06Rik	ENSMUST00000191350	ENSMUSP00000139631	TRANSLATION	protein_coding	start	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031509	1700016D06Rik	ENSMUST00000190741	ENSMUSP00000140232	TRANSLATION	protein_coding	-	-	2	34	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000031509	1700016D06Rik	ENSMUST00000190787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031509	1700016D06Rik	ENSMUST00000033906	ENSMUSP00000033906	TRANSLATION	protein_coding	-	CCDS40221.1	1	166	0	0	0.5	106	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039396	Neil3	ENSMUST00000047768	ENSMUSP00000041909	TRANSLATION	protein_coding	-	CCDS22305.1	1	606	4	6.78	0.5	166.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000039396	Neil3	ENSMUST00000130656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039396	Neil3	ENSMUST00000211404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039396	Neil3	ENSMUST00000149053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039396	Neil3	ENSMUST00000126157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039396	Neil3	ENSMUST00000135443	ENSMUSP00000121938	TRANSLATION	protein_coding	stop	-	3	49	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039396	Neil3	ENSMUST00000153267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003033	Ap1m1	ENSMUST00000003117	ENSMUSP00000003117	TRANSLATION	protein_coding	-	CCDS22411.1	1	423	0	11.32	18.2	329.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003033	Ap1m1	ENSMUST00000145213	ENSMUSP00000138319	TRANSLATION	protein_coding	stop	-	3	107	0	3.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003033	Ap1m1	ENSMUST00000212841	ENSMUSP00000148530	TRANSLATION	protein_coding	stop	-	2	132	0	3.745	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003033	Ap1m1	ENSMUST00000151546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003033	Ap1m1	ENSMUST00000156735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003033	Ap1m1	ENSMUST00000126885	ENSMUSP00000120435	TRANSLATION	protein_coding	stop	-	5	181	0	5.16	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003033	Ap1m1	ENSMUST00000212940	ENSMUSP00000148799	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003033	Ap1m1	ENSMUST00000212708	ENSMUSP00000148424	TRANSLATION	nonsense_mediated_decay	-	-	3	55	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074064	Mlycd	ENSMUST00000098367	ENSMUSP00000095970	TRANSLATION	protein_coding	-	CCDS22703.1	1	492	0	5	1.5	318.6	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000074064	Mlycd	ENSMUST00000145121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050357	Carmil2	ENSMUST00000213019	ENSMUSP00000148422	TRANSLATION	protein_coding	-	-	1	1397	0	14.9	1.5	247.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050357	Carmil2	ENSMUST00000062574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050357	Carmil2	ENSMUST00000212643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041515	Irf8	ENSMUST00000162658	ENSMUSP00000125443	TRANSLATION	protein_coding	stop	-	3	151	0	1	0	90.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041515	Irf8	ENSMUST00000162001	ENSMUSP00000125029	TRANSLATION	protein_coding	-	CCDS22721.1	1	424	0	4.84	3.9	361.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000041515	Irf8	ENSMUST00000047737	ENSMUSP00000040245	TRANSLATION	protein_coding	-	CCDS22721.1	1	424	0	4.84	3.9	361.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000041515	Irf8	ENSMUST00000160943	ENSMUSP00000125447	TRANSLATION	protein_coding	-	-	5	333	0	3.84	0	282.7	0	-4,-7	-	-	5.292	MINOR
ENSMUSG00000041515	Irf8	ENSMUST00000160388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041515	Irf8	ENSMUST00000160594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041515	Irf8	ENSMUST00000162775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043787	Defb12	ENSMUST00000062113	ENSMUSP00000060899	TRANSLATION	protein_coding	-	CCDS52496.1	1	85	0	0	0.5	23.4	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058019	Ces5a	ENSMUST00000080391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058019	Ces5a	ENSMUST00000077816	ENSMUSP00000076988	TRANSLATION	protein_coding	-	-	5	575	6	9.428	0.5	506	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000058019	Ces5a	ENSMUST00000212407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058019	Ces5a	ENSMUST00000212690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058019	Ces5a	ENSMUST00000212722	ENSMUSP00000148373	TRANSLATION	protein_coding	stop	-	3	263	4	4.55	0	320.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000058019	Ces5a	ENSMUST00000212009	ENSMUSP00000148481	TRANSLATION	protein_coding	-	CCDS85584.1	1	575	6	9.428	0.5	506	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000061958	Defa38	ENSMUST00000077452	ENSMUSP00000076665	TRANSLATION	protein_coding	-	CCDS52503.1	1	116	5	0	0.5	77.7	0	4,-1	-	-	11	PRINCIPAL:1
ENSMUSG00000111184	Gm49661	ENSMUST00000214133	ENSMUSP00000150387	TRANSLATION	protein_coding	-	-	2	112	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000078908	Mon1b	ENSMUST00000179926	ENSMUSP00000137605	TRANSLATION	protein_coding	-	CCDS22685.1	1	553	0	0.8	0.5	417.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078908	Mon1b	ENSMUST00000035777	ENSMUSP00000045089	TRANSLATION	protein_coding	-	CCDS22685.1	1	553	0	0.8	0.5	417.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031688	Pou4f2	ENSMUST00000034115	ENSMUSP00000034115	TRANSLATION	protein_coding	-	CCDS22429.1	1	411	0	0.6	1.7	165.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000008206	Cers4	ENSMUST00000176705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008206	Cers4	ENSMUST00000008350	ENSMUSP00000008350	TRANSLATION	protein_coding	-	CCDS22086.1	1	393	0	1.4	1.5	166.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000008206	Cers4	ENSMUST00000176267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008206	Cers4	ENSMUST00000176130	ENSMUSP00000135652	TRANSLATION	nonsense_mediated_decay	-	-	5	211	0	1.4	0	58.3	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000008206	Cers4	ENSMUST00000176042	ENSMUSP00000135594	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000008206	Cers4	ENSMUST00000177010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008206	Cers4	ENSMUST00000176837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008206	Cers4	ENSMUST00000176932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008206	Cers4	ENSMUST00000175781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063672	Nkx6-3	ENSMUST00000071588	ENSMUSP00000071517	TRANSLATION	protein_coding	-	CCDS52524.1	1	262	0	1.4	8.4	76.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025317	Car5a	ENSMUST00000057653	ENSMUSP00000060457	TRANSLATION	protein_coding	-	CCDS22731.1	1	299	6	5.75	0.5	286.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000025317	Car5a	ENSMUST00000151462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031780	Ccl17	ENSMUST00000034232	ENSMUSP00000034232	TRANSLATION	protein_coding	-	CCDS57633.1	1	103	0	2	0.5	65.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000011832	Evi5l	ENSMUST00000239400	ENSMUSP00000159328	TRANSLATION	protein_coding	-	-	-	401	0	5.99	0	183.8	0	-4,-5	-	-	11.4	MINOR
ENSMUSG00000011832	Evi5l	ENSMUST00000177053	ENSMUSP00000135159	TRANSLATION	protein_coding	-	CCDS40207.2	1	406	0	5.99	0.5	183.8	0	-4,-5	-	-	11.4	MINOR
ENSMUSG00000011832	Evi5l	ENSMUST00000176462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000176186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000176764	ENSMUSP00000134857	TRANSLATION	nonsense_mediated_decay	-	-	1	451	0	6.29	0	183.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011832	Evi5l	ENSMUST00000175650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000176645	ENSMUSP00000135744	TRANSLATION	protein_coding	start	-	1	186	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011832	Evi5l	ENSMUST00000177309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011832	Evi5l	ENSMUST00000176825	ENSMUSP00000135700	TRANSLATION	protein_coding	-	-	5	797	0	6.29	3.6	183.8	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000011832	Evi5l	ENSMUST00000177499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000176072	ENSMUSP00000134867	TRANSLATION	protein_coding	-	-	5	750	0	6.29	0	183.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000011832	Evi5l	ENSMUST00000177455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000177085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000177077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011832	Evi5l	ENSMUST00000176149	ENSMUSP00000135479	TRANSLATION	protein_coding	-	-	5	808	0	6.29	3.6	183.8	0	-4,-5	-	-	13	PRINCIPAL:5
ENSMUSG00000038542	Pcid2	ENSMUST00000166881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038542	Pcid2	ENSMUST00000164416	ENSMUSP00000133204	TRANSLATION	protein_coding	-	CCDS52484.1	1	399	0	6	19.5	66.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038542	Pcid2	ENSMUST00000168164	ENSMUSP00000128207	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038542	Pcid2	ENSMUST00000165097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038542	Pcid2	ENSMUST00000167198	ENSMUSP00000130059	TRANSLATION	nonsense_mediated_decay	start	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038542	Pcid2	ENSMUST00000172443	ENSMUSP00000127622	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031682	1700011L22Rik	ENSMUST00000034109	ENSMUSP00000034109	TRANSLATION	protein_coding	-	CCDS52605.1	1	208	0	0	1.5	309.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031682	1700011L22Rik	ENSMUST00000210889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034330	Plcg2	ENSMUST00000081232	ENSMUSP00000079991	TRANSLATION	protein_coding	-	CCDS22700.1	1	1265	10	16.9	7.6	612.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000061561	Olfr373	ENSMUST00000074540	ENSMUSP00000074128	TRANSLATION	protein_coding	-	CCDS52593.1	-	314	0	0.36	2.9	189.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061561	Olfr373	ENSMUST00000213940	ENSMUSP00000149853	TRANSLATION	protein_coding	-	CCDS52593.1	5	314	0	0.36	2.9	189.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061561	Olfr373	ENSMUST00000215198	ENSMUSP00000149452	TRANSLATION	protein_coding	-	CCDS52593.1	5	314	0	0.36	2.9	189.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031930	Wwp2	ENSMUST00000212993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212205	ENSMUSP00000148679	TRANSLATION	protein_coding	-	-	1	824	6	16.28	0	544.9	0	-4,-1	-	-	16.398	MINOR
ENSMUSG00000031930	Wwp2	ENSMUST00000166615	ENSMUSP00000132224	TRANSLATION	protein_coding	-	CCDS40467.1	1	870	6	17.08	8.8	544.9	0	-4,-1	-	-	20.691	PRINCIPAL:1
ENSMUSG00000031930	Wwp2	ENSMUST00000212737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031930	Wwp2	ENSMUST00000212559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031930	Wwp2	ENSMUST00000212543	ENSMUSP00000148813	TRANSLATION	protein_coding	-	-	1	431	6	11.25	9.7	372.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000031930	Wwp2	ENSMUST00000213097	ENSMUSP00000148365	TRANSLATION	protein_coding	stop	-	3	104	0	1.65	0	29	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000014859	E2f4	ENSMUST00000212572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014859	E2f4	ENSMUST00000212037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014859	E2f4	ENSMUST00000015003	ENSMUSP00000015003	TRANSLATION	protein_coding	-	CCDS40456.1	1	410	0	3.195	2.7	197.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031903	Pla2g15	ENSMUST00000212059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031903	Pla2g15	ENSMUST00000212116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031903	Pla2g15	ENSMUST00000212963	ENSMUSP00000148565	TRANSLATION	protein_coding	-	-	1	236	0	3.6	0.5	88.9	0	0,-4	-	-	0	MINOR
ENSMUSG00000031903	Pla2g15	ENSMUST00000034377	ENSMUSP00000034377	TRANSLATION	protein_coding	-	CCDS22630.1	1	412	0	7.6	1.5	273	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000063412	Gm10131	ENSMUST00000080152	ENSMUSP00000147411	TRANSLATION	protein_coding	-	-	-	104	0	1	16.3	154.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000039661	Dusp26	ENSMUST00000170204	ENSMUSP00000126397	TRANSLATION	protein_coding	-	CCDS22219.1	5	211	9	3	7.5	107.3	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000039661	Dusp26	ENSMUST00000036631	ENSMUSP00000046794	TRANSLATION	protein_coding	-	CCDS22219.1	1	211	9	3	7.5	107.3	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000039661	Dusp26	ENSMUST00000161713	ENSMUSP00000124949	TRANSLATION	protein_coding	-	CCDS22219.1	1	211	9	3	7.5	107.3	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000039661	Dusp26	ENSMUST00000162551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039661	Dusp26	ENSMUST00000160700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031661	Nkd1	ENSMUST00000211113	ENSMUSP00000147347	TRANSLATION	protein_coding	-	CCDS52631.1	5	367	6	1.3	0.5	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031661	Nkd1	ENSMUST00000034086	ENSMUSP00000034086	TRANSLATION	protein_coding	-	CCDS22511.1	1	471	6	1.3	6.3	0	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031661	Nkd1	ENSMUST00000169179	ENSMUSP00000125935	TRANSLATION	protein_coding	-	CCDS52631.1	2	367	6	1.3	0.5	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000050190	Adam34l	ENSMUST00000056023	ENSMUSP00000058858	TRANSLATION	protein_coding	-	CCDS40332.1	-	736	19	0.48	0.5	403	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000025812	Pard3	ENSMUST00000163021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025812	Pard3	ENSMUST00000160581	ENSMUSP00000124141	TRANSLATION	protein_coding	start/stop	-	5	984	0	7.154	0	245.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162727	ENSMUSP00000124359	TRANSLATION	protein_coding	start	-	2	116	0	1.624	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000160593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025812	Pard3	ENSMUST00000108752	ENSMUSP00000104383	TRANSLATION	protein_coding	-	CCDS40523.1	5	606	0	5.124	1.5	109.4	0	-4,-7	-	-	1.338	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000159537	ENSMUSP00000124934	TRANSLATION	protein_coding	stop	-	5	943	0	7.154	0	245.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162665	ENSMUSP00000124718	TRANSLATION	protein_coding	start	-	1	1324	0	7.454	0	245.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000160717	ENSMUSP00000125612	TRANSLATION	protein_coding	-	CCDS40523.1	1	606	0	5.124	1.5	109.4	0	-4,-7	-	-	1.338	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162602	ENSMUSP00000125450	TRANSLATION	protein_coding	stop	-	5	1024	0	7.454	0	245.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000159818	ENSMUSP00000124339	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	1	0	67.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000163002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025812	Pard3	ENSMUST00000162456	ENSMUSP00000124162	TRANSLATION	protein_coding	-	CCDS22789.1	1	896	0	5.124	1.5	109.4	0	-4,-7	-	-	1.338	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162907	ENSMUSP00000124319	TRANSLATION	protein_coding	-	CCDS52712.1	1	741	0	7.454	0.5	245.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025812	Pard3	ENSMUST00000162531	ENSMUSP00000125610	TRANSLATION	protein_coding	stop	-	5	1094	0	7.154	0	245.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000026921	ENSMUSP00000026921	TRANSLATION	protein_coding	-	CCDS80946.1	1	1319	0	7.454	1.5	245.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025812	Pard3	ENSMUST00000159141	ENSMUSP00000124733	TRANSLATION	nonsense_mediated_decay	-	-	2	59	0	1	0	68.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162536	ENSMUSP00000125212	TRANSLATION	protein_coding	-	-	5	1289	0	7.454	0	245.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025812	Pard3	ENSMUST00000159940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025812	Pard3	ENSMUST00000161355	ENSMUSP00000125064	TRANSLATION	protein_coding	stop	-	5	990	0	7.454	0	245.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000160766	ENSMUSP00000124533	TRANSLATION	protein_coding	-	-	5	1247	0	7.154	0	245.6	0	-4,-2	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000025812	Pard3	ENSMUST00000162176	ENSMUSP00000123944	TRANSLATION	protein_coding	start/stop	-	1	422	0	4.764	0	109.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000161348	ENSMUSP00000123951	TRANSLATION	protein_coding	start	-	5	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000161277	ENSMUSP00000124789	TRANSLATION	protein_coding	start/stop	-	5	919	0	6.154	0	166.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000079777	ENSMUSP00000078710	TRANSLATION	protein_coding	-	CCDS22789.1	5	896	0	5.124	1.5	109.4	0	-4,-7	-	-	1.338	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025812	Pard3	ENSMUST00000159511	ENSMUSP00000124441	TRANSLATION	protein_coding	start/stop	-	3	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000162309	ENSMUSP00000124282	TRANSLATION	protein_coding	-	CCDS22788.1	1	1333	0	7.454	1.5	245.6	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000025812	Pard3	ENSMUST00000238870	ENSMUSP00000159093	TRANSLATION	protein_coding	stop	-	-	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025812	Pard3	ENSMUST00000160272	ENSMUSP00000125453	TRANSLATION	protein_coding	-	CCDS80945.1	1	1334	0	7.454	1.5	245.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031698	Mylk3	ENSMUST00000121972	ENSMUSP00000113960	TRANSLATION	protein_coding	-	-	1	724	18	7.55	0	241.6	0	-4,-5	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000031698	Mylk3	ENSMUST00000138825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031698	Mylk3	ENSMUST00000034133	ENSMUSP00000034133	TRANSLATION	protein_coding	-	CCDS40422.1	1	795	18	7.85	0.5	241.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031698	Mylk3	ENSMUST00000137290	ENSMUSP00000123372	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031698	Mylk3	ENSMUST00000122452	ENSMUSP00000113389	TRANSLATION	protein_coding	-	CCDS80910.1	1	662	18	7.85	0.5	241.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000035785	Cmtm2b	ENSMUST00000041973	ENSMUSP00000043127	TRANSLATION	protein_coding	-	CCDS22576.1	1	210	0	0	0.5	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000035785	Cmtm2b	ENSMUST00000212912	ENSMUSP00000148496	TRANSLATION	protein_coding	start	-	3	126	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000074442	Defa31	ENSMUST00000098896	ENSMUSP00000096495	TRANSLATION	protein_coding	-	CCDS52505.1	1	93	0	0	1.5	122	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031478	Nek3	ENSMUST00000110730	ENSMUSP00000106358	TRANSLATION	protein_coding	-	CCDS52519.1	5	511	18	6.6	0.5	223.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000031478	Nek3	ENSMUST00000033865	ENSMUSP00000033865	TRANSLATION	protein_coding	-	CCDS22169.1	1	509	18	6.6	0.5	223.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000031478	Nek3	ENSMUST00000151371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031478	Nek3	ENSMUST00000178324	ENSMUSP00000136876	TRANSLATION	protein_coding	-	CCDS52519.1	1	511	18	6.6	0.5	223.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000019731	Slc35e1	ENSMUST00000141352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019731	Slc35e1	ENSMUST00000152080	ENSMUSP00000115754	TRANSLATION	protein_coding	-	CCDS22415.2	1	409	0	0	0.5	309.3	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058833	Rex1bd	ENSMUST00000132107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058833	Rex1bd	ENSMUST00000133683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058833	Rex1bd	ENSMUST00000128620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058833	Rex1bd	ENSMUST00000135773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058833	Rex1bd	ENSMUST00000143598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058833	Rex1bd	ENSMUST00000136913	ENSMUSP00000120446	TRANSLATION	protein_coding	-	-	5	151	0	0	0	91.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000058833	Rex1bd	ENSMUST00000138196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058833	Rex1bd	ENSMUST00000075175	ENSMUSP00000074670	TRANSLATION	protein_coding	-	CCDS22370.1	1	169	0	0	1.5	91.6	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000050052	Tdrp	ENSMUST00000062613	ENSMUSP00000058371	TRANSLATION	protein_coding	-	CCDS22119.1	1	182	0	0	1.5	230.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050052	Tdrp	ENSMUST00000119182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050052	Tdrp	ENSMUST00000194703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050052	Tdrp	ENSMUST00000145695	ENSMUSP00000114338	TRANSLATION	protein_coding	stop	-	5	74	0	0	0	49.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050052	Tdrp	ENSMUST00000193921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050052	Tdrp	ENSMUST00000210414	ENSMUSP00000147717	TRANSLATION	protein_coding	-	-	3	35	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039620	Trmt9b	ENSMUST00000152039	ENSMUSP00000119288	TRANSLATION	nonsense_mediated_decay	-	-	1	110	14	1.4	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039620	Trmt9b	ENSMUST00000135373	ENSMUSP00000120524	TRANSLATION	protein_coding	-	-	1	126	16	1.4	0	34.8	0	-4,-5	-	-	14.238	MINOR
ENSMUSG00000039620	Trmt9b	ENSMUST00000171777	ENSMUSP00000127875	TRANSLATION	protein_coding	-	CCDS22248.1	1	447	16	1.4	1.5	93.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039620	Trmt9b	ENSMUST00000125492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039620	Trmt9b	ENSMUST00000147525	ENSMUSP00000119912	TRANSLATION	protein_coding	-	CCDS22248.1	1	447	16	1.4	1.5	93.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060470	Adgrg3	ENSMUST00000212570	ENSMUSP00000148483	TRANSLATION	nonsense_mediated_decay	start	-	1	213	0	1.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060470	Adgrg3	ENSMUST00000051259	ENSMUSP00000051079	TRANSLATION	protein_coding	-	CCDS22554.1	1	542	0	2.45	0.5	155.5	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000060470	Adgrg3	ENSMUST00000211974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060470	Adgrg3	ENSMUST00000212951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060470	Adgrg3	ENSMUST00000211994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060470	Adgrg3	ENSMUST00000212558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038206	Fbxo8	ENSMUST00000210863	ENSMUSP00000148124	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038206	Fbxo8	ENSMUST00000156840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038206	Fbxo8	ENSMUST00000211294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038206	Fbxo8	ENSMUST00000110322	ENSMUSP00000105951	TRANSLATION	protein_coding	-	-	1	161	0	0.76	0	30.2	0	-4,-1	-	-	1.062	MINOR
ENSMUSG00000038206	Fbxo8	ENSMUST00000040218	ENSMUSP00000037544	TRANSLATION	protein_coding	-	CCDS22314.1	1	319	0	3.23	13.5	157.3	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000031642	Sh3rf1	ENSMUST00000210210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031642	Sh3rf1	ENSMUST00000209611	ENSMUSP00000148118	TRANSLATION	protein_coding	-	-	1	836	8	3.28	0	161.7	0	-4,-5	-	-	13.35	MINOR
ENSMUSG00000031642	Sh3rf1	ENSMUST00000034060	ENSMUSP00000034060	TRANSLATION	protein_coding	-	CCDS40348.1	1	891	8	4.08	1.5	212.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000014782	Plekhg4	ENSMUST00000014927	ENSMUSP00000014927	TRANSLATION	protein_coding	-	CCDS40458.1	5	1181	0	3.58	0.5	96.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000014782	Plekhg4	ENSMUST00000159286	ENSMUSP00000125556	TRANSLATION	nonsense_mediated_decay	-	-	1	297	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014782	Plekhg4	ENSMUST00000161672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014782	Plekhg4	ENSMUST00000160650	ENSMUSP00000124061	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014782	Plekhg4	ENSMUST00000160191	ENSMUSP00000125249	TRANSLATION	protein_coding	-	-	5	1112	0	3.58	0	96.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000014782	Plekhg4	ENSMUST00000214056	ENSMUSP00000150574	TRANSLATION	protein_coding	-	-	5	1217	0	3.58	0.5	96.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000035237	Lcat	ENSMUST00000038896	ENSMUSP00000038232	TRANSLATION	protein_coding	-	CCDS22622.1	1	438	6	6	5.1	363.7	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000042353	Frem3	ENSMUST00000039695	ENSMUSP00000038015	TRANSLATION	protein_coding	-	CCDS52606.1	5	2127	4	3.64	0.5	854.3	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000071064	Zfp827	ENSMUST00000148713	ENSMUSP00000120913	TRANSLATION	protein_coding	start	-	1	370	26	2.37	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071064	Zfp827	ENSMUST00000129613	ENSMUSP00000119511	TRANSLATION	protein_coding	start	-	3	223	17	1.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071064	Zfp827	ENSMUST00000087927	ENSMUSP00000085238	TRANSLATION	protein_coding	-	-	1	459	7	1.2	0	38.9	0	-4,-6	-	-	5.508	MINOR
ENSMUSG00000071064	Zfp827	ENSMUST00000098614	ENSMUSP00000096214	TRANSLATION	protein_coding	-	CCDS52604.1	1	1078	38	3.17	4.1	60.7	0	-4,-6	-	-	12.598	MINOR
ENSMUSG00000071064	Zfp827	ENSMUST00000119254	ENSMUSP00000113199	TRANSLATION	protein_coding	-	CCDS80900.1	1	1074	38	2.57	4.1	60.7	0	-4,-6	-	-	11.398	MINOR
ENSMUSG00000071064	Zfp827	ENSMUST00000211475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071064	Zfp827	ENSMUST00000155960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071064	Zfp827	ENSMUST00000238669	ENSMUSP00000158613	TRANSLATION	protein_coding	-	-	-	1346	58	3.37	3.6	60.7	0	-4,-6	-	-	18.839	PRINCIPAL:1
ENSMUSG00000071064	Zfp827	ENSMUST00000145827	ENSMUSP00000114208	TRANSLATION	nonsense_mediated_decay	start	-	5	343	26	1.605	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034518	Hmgxb4	ENSMUST00000211863	ENSMUSP00000148561	TRANSLATION	protein_coding	stop	-	2	53	0	0	0	60.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034518	Hmgxb4	ENSMUST00000145919	ENSMUSP00000133586	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034518	Hmgxb4	ENSMUST00000041759	ENSMUSP00000045126	TRANSLATION	protein_coding	-	CCDS22422.1	1	594	0	1.9	1.5	234	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034518	Hmgxb4	ENSMUST00000133585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034518	Hmgxb4	ENSMUST00000212372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034518	Hmgxb4	ENSMUST00000151062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034518	Hmgxb4	ENSMUST00000109940	ENSMUSP00000105566	TRANSLATION	protein_coding	-	CCDS85564.1	1	197	0	1.9	0.5	57.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000034518	Hmgxb4	ENSMUST00000134126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034518	Hmgxb4	ENSMUST00000129391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061825	Ces2c	ENSMUST00000055052	ENSMUSP00000058567	TRANSLATION	protein_coding	-	CCDS22587.1	1	561	6	8.945	1.5	562.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000061825	Ces2c	ENSMUST00000162970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003573	Homer3	ENSMUST00000143528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003573	Homer3	ENSMUST00000140212	ENSMUSP00000117033	TRANSLATION	protein_coding	-	CCDS22363.1	1	356	7	4.6	5.1	124.1	0	-4,-6	-	-	20	PRINCIPAL:3
ENSMUSG00000003573	Homer3	ENSMUST00000003669	ENSMUSP00000003669	TRANSLATION	protein_coding	-	CCDS52569.1	1	359	7	4.6	5.1	124.1	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000003573	Homer3	ENSMUST00000155711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003573	Homer3	ENSMUST00000135692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003573	Homer3	ENSMUST00000135368	ENSMUSP00000137560	TRANSLATION	protein_coding	start	-	3	93	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003573	Homer3	ENSMUST00000110124	ENSMUSP00000105751	TRANSLATION	protein_coding	-	CCDS52569.1	5	359	7	4.6	5.1	124.1	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000003573	Homer3	ENSMUST00000087467	ENSMUSP00000084735	TRANSLATION	protein_coding	-	-	1	122	7	2	0	115.1	0	-4,-6	-	-	12.258	MINOR
ENSMUSG00000033658	Ddx19b	ENSMUST00000065784	ENSMUSP00000066806	TRANSLATION	protein_coding	-	CCDS57645.1	1	494	15	9.5	1.5	191.1	0	-4,-1	-	-	17.175	MINOR
ENSMUSG00000033658	Ddx19b	ENSMUST00000040241	ENSMUSP00000038551	TRANSLATION	protein_coding	-	CCDS22669.1	1	479	15	10	9.5	191.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000074151	Nlrc5	ENSMUST00000183287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074151	Nlrc5	ENSMUST00000137032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074151	Nlrc5	ENSMUST00000053085	ENSMUSP00000138322	TRANSLATION	protein_coding	-	CCDS59741.1	1	1915	8	19.385	0.5	190.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074151	Nlrc5	ENSMUST00000211816	ENSMUSP00000148677	TRANSLATION	protein_coding	-	CCDS59741.1	5	1915	8	19.385	0.5	190.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074151	Nlrc5	ENSMUST00000098489	ENSMUSP00000138409	TRANSLATION	protein_coding	-	-	5	138	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000074151	Nlrc5	ENSMUST00000212382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074151	Nlrc5	ENSMUST00000182409	ENSMUSP00000148540	TRANSLATION	protein_coding	-	-	5	1393	8	10.875	0	132.2	0	-4,-5	-	-	8.508	MINOR
ENSMUSG00000074151	Nlrc5	ENSMUST00000212220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074151	Nlrc5	ENSMUST00000183132	ENSMUSP00000138166	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	1.005	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033938	Ndufb7	ENSMUST00000036996	ENSMUSP00000037341	TRANSLATION	protein_coding	-	CCDS22455.1	1	137	0	3	7.5	99.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033938	Ndufb7	ENSMUST00000127162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052794	1700030K09Rik	ENSMUST00000064853	ENSMUSP00000063244	TRANSLATION	protein_coding	-	CCDS22414.1	1	641	0	0	0.5	228.3	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000052794	1700030K09Rik	ENSMUST00000121902	ENSMUSP00000113279	TRANSLATION	protein_coding	-	-	5	607	0	0	0	228.3	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000052794	1700030K09Rik	ENSMUST00000139130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117748	Gm50241	ENSMUST00000169312	ENSMUSP00000129823	TRANSLATION	protein_coding	-	-	1	533	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000117748	Gm50241	ENSMUST00000176437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109764	Klkb1	ENSMUST00000026907	ENSMUSP00000026907	TRANSLATION	protein_coding	-	CCDS22275.1	1	638	10	13.4	1.5	381.9	0	0,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023235	Ccl25	ENSMUST00000110982	ENSMUSP00000106610	TRANSLATION	protein_coding	-	-	1	134	0	1.2	0	57.4	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000023235	Ccl25	ENSMUST00000153254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023235	Ccl25	ENSMUST00000024004	ENSMUSP00000024004	TRANSLATION	protein_coding	-	CCDS22085.1	1	144	0	1.2	1.5	57.4	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000023235	Ccl25	ENSMUST00000207839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023235	Ccl25	ENSMUST00000207925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023235	Ccl25	ENSMUST00000136191	ENSMUSP00000117515	TRANSLATION	protein_coding	stop	-	3	119	0	0.6	0	34.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023235	Ccl25	ENSMUST00000155797	ENSMUSP00000140747	TRANSLATION	nonsense_mediated_decay	-	-	2	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023235	Ccl25	ENSMUST00000098949	ENSMUSP00000096548	TRANSLATION	nonsense_mediated_decay	-	-	2	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023235	Ccl25	ENSMUST00000069762	ENSMUSP00000064658	TRANSLATION	non_stop_decay	stop	-	2	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023235	Ccl25	ENSMUST00000127460	ENSMUSP00000120719	TRANSLATION	protein_coding	-	-	5	228	0	1.2	0.5	57.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000006525	ENSMUSP00000006525	TRANSLATION	protein_coding	-	CCDS52696.1	2	559	8	7.43	0.5	266.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000127984	ENSMUSP00000118997	TRANSLATION	protein_coding	-	CCDS22744.1	1	620	8	7.43	1.5	266.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000064674	ENSMUSP00000065728	TRANSLATION	protein_coding	-	CCDS52697.1	1	585	8	7.43	1.5	266.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000134045	ENSMUSP00000117630	TRANSLATION	protein_coding	stop	-	5	185	0	2.33	0	101.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000142535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000148630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006362	Cbfa2t3	ENSMUST00000147374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031715	Smarca5	ENSMUST00000150277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031715	Smarca5	ENSMUST00000122807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031715	Smarca5	ENSMUST00000140110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031715	Smarca5	ENSMUST00000043359	ENSMUSP00000044361	TRANSLATION	protein_coding	-	CCDS22442.1	1	1051	7	19.2	0.5	335.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031715	Smarca5	ENSMUST00000148455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031715	Smarca5	ENSMUST00000142470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050271	Prag1	ENSMUST00000110492	ENSMUSP00000106118	TRANSLATION	protein_coding	-	CCDS22247.2	1	1373	0	0	0.5	45.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050271	Prag1	ENSMUST00000145386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050271	Prag1	ENSMUST00000150295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031644	Nek1	ENSMUST00000142601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031644	Nek1	ENSMUST00000211672	ENSMUSP00000147809	TRANSLATION	protein_coding	-	CCDS85541.1	1	1275	21	8.5	0.5	234.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031644	Nek1	ENSMUST00000120689	ENSMUSP00000113932	TRANSLATION	protein_coding	-	CCDS80879.1	1	1231	21	8.5	0.5	234.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031644	Nek1	ENSMUST00000140444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031644	Nek1	ENSMUST00000155664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031644	Nek1	ENSMUST00000154313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031644	Nek1	ENSMUST00000034065	ENSMUSP00000034065	TRANSLATION	protein_coding	-	CCDS40347.1	1	1203	21	8.5	0.5	234.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031644	Nek1	ENSMUST00000125717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031644	Nek1	ENSMUST00000211256	ENSMUSP00000147258	TRANSLATION	protein_coding	-	CCDS85542.1	1	1178	21	8.5	0.5	234.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031791	Tmem38a	ENSMUST00000211914	ENSMUSP00000148844	TRANSLATION	nonsense_mediated_decay	-	-	5	115	0	1.466	0	70.9	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000031791	Tmem38a	ENSMUST00000034244	ENSMUSP00000034244	TRANSLATION	protein_coding	-	CCDS22417.1	1	298	0	3.724	6.3	270.6	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031791	Tmem38a	ENSMUST00000212763	ENSMUSP00000148388	TRANSLATION	protein_coding	-	-	3	165	0	2.266	0	173.7	5	-4,-5	-	-	3.27	MINOR
ENSMUSG00000034361	Cpne2	ENSMUST00000156894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034361	Cpne2	ENSMUST00000212550	ENSMUSP00000148447	TRANSLATION	nonsense_mediated_decay	start	-	3	61	4	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034361	Cpne2	ENSMUST00000109537	ENSMUSP00000105163	TRANSLATION	protein_coding	-	-	1	547	11	3.17	7.6	388.8	0	-4,-5	-	-	20.247	ALTERNATIVE:1
ENSMUSG00000034361	Cpne2	ENSMUST00000156377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034361	Cpne2	ENSMUST00000048653	ENSMUSP00000045755	TRANSLATION	protein_coding	-	CCDS22543.1	1	548	11	3.17	9.6	389.7	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000034361	Cpne2	ENSMUST00000136550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036902	Neto2	ENSMUST00000209479	ENSMUSP00000148172	TRANSLATION	protein_coding	-	-	1	518	3	2.506	6.6	161.5	1	1,-3	-	-	15.888	MINOR
ENSMUSG00000036902	Neto2	ENSMUST00000215046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036902	Neto2	ENSMUST00000109686	ENSMUSP00000105308	TRANSLATION	protein_coding	-	CCDS40423.1	1	553	3	2.506	0.5	161.5	1	-4,-7	-	-	14.304	MINOR
ENSMUSG00000036902	Neto2	ENSMUST00000216286	ENSMUSP00000150062	TRANSLATION	protein_coding	-	-	1	525	3	2.836	11.6	161.5	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000036902	Neto2	ENSMUST00000209259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000210703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000211332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000210630	ENSMUSP00000147396	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	0.93	2	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000031684	Slc10a7	ENSMUST00000210132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000209643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000209490	ENSMUSP00000148199	TRANSLATION	protein_coding	-	CCDS85567.1	1	298	0	2.69	0.5	54.3	10	-4,-7	-	-	12	MINOR
ENSMUSG00000031684	Slc10a7	ENSMUST00000034111	ENSMUSP00000034111	TRANSLATION	protein_coding	-	CCDS40395.1	1	340	0	2.69	8.8	54.3	12	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031684	Slc10a7	ENSMUST00000211315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031684	Slc10a7	ENSMUST00000210515	ENSMUSP00000147826	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031684	Slc10a7	ENSMUST00000211286	ENSMUSP00000147724	TRANSLATION	nonsense_mediated_decay	-	-	1	340	0	2.69	8.8	54.3	12	-4,-7	-	-	-1	MINOR
ENSMUSG00000031684	Slc10a7	ENSMUST00000209992	ENSMUSP00000147659	TRANSLATION	protein_coding	-	CCDS85568.1	1	312	0	2.24	1.7	0	10	-4,-7	-	-	5.268	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000156549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031626	Sorbs2	ENSMUST00000209534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000140088	ENSMUSP00000114158	TRANSLATION	protein_coding	start/stop	-	3	186	0	0.36	0	34.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000138049	ENSMUSP00000123503	TRANSLATION	protein_coding	stop	-	1	532	0	0.51	0	85.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000211095	ENSMUSP00000148072	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000155858	ENSMUSP00000122820	TRANSLATION	protein_coding	start/stop	-	3	231	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000171337	ENSMUSP00000128000	TRANSLATION	protein_coding	-	CCDS57618.1	1	1214	0	6.27	0.5	244.7	0	-4,-2	-	-	11.682	PRINCIPAL:4
ENSMUSG00000031626	Sorbs2	ENSMUST00000143820	ENSMUSP00000119539	TRANSLATION	protein_coding	stop	-	3	212	0	0	0	93.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000124544	ENSMUSP00000147462	TRANSLATION	protein_coding	-	-	1	274	0	0	0	93.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000134675	ENSMUSP00000118160	TRANSLATION	protein_coding	-	-	1	308	0	0	0	93.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000153798	ENSMUSP00000118353	TRANSLATION	protein_coding	-	-	1	584	0	4.69	0	195.8	0	-4,-5	-	-	5.586	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000135336	ENSMUSP00000114286	TRANSLATION	protein_coding	-	CCDS57619.1	5	1196	0	6.43	1.5	244.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031626	Sorbs2	ENSMUST00000125295	ENSMUSP00000116768	TRANSLATION	protein_coding	start	-	1	1134	0	6.27	0	244.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000150102	ENSMUSP00000114951	TRANSLATION	protein_coding	stop	-	2	91	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000211721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000210946	ENSMUSP00000147573	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000067065	ENSMUSP00000070720	TRANSLATION	protein_coding	-	-	5	1079	0	6.27	0	151.1	0	-4,-6	-	-	6.066	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000141039	ENSMUSP00000117544	TRANSLATION	protein_coding	-	-	5	308	0	0	0	93.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000238803	ENSMUSP00000159073	TRANSLATION	protein_coding	start	-	-	390	0	2.45	0	58.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000127395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031626	Sorbs2	ENSMUST00000139869	ENSMUSP00000121235	TRANSLATION	protein_coding	-	-	1	623	0	6.43	0.5	236.4	0	-4,-5	-	-	11.502	ALTERNATIVE:2
ENSMUSG00000031626	Sorbs2	ENSMUST00000211442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000132139	ENSMUSP00000123250	TRANSLATION	protein_coding	-	CCDS80872.1	5	707	0	5.94	0.5	229.7	0	-4,-2	-	-	10.122	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000136119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000136344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000132767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031626	Sorbs2	ENSMUST00000067107	ENSMUSP00000067641	TRANSLATION	protein_coding	-	CCDS57619.1	1	1196	0	6.43	1.5	244.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031626	Sorbs2	ENSMUST00000130850	ENSMUSP00000123195	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000149752	ENSMUSP00000121073	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000145458	ENSMUSP00000116536	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000146627	ENSMUSP00000120487	TRANSLATION	protein_coding	start/stop	-	3	199	0	0.51	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000132730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000134321	ENSMUSP00000115842	TRANSLATION	protein_coding	stop	-	3	50	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000139103	ENSMUSP00000119380	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000133864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031626	Sorbs2	ENSMUST00000126067	ENSMUSP00000118562	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031626	Sorbs2	ENSMUST00000130011	ENSMUSP00000121619	TRANSLATION	protein_coding	-	CCDS80874.1	1	652	0	6.27	0.5	236.4	0	-4,-7	-	-	11.184	ALTERNATIVE:2
ENSMUSG00000031577	Tti2	ENSMUST00000209851	ENSMUSP00000148056	TRANSLATION	protein_coding	-	CCDS22221.1	1	512	0	0	1.5	48.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000031577	Tti2	ENSMUST00000210129	ENSMUSP00000147956	TRANSLATION	protein_coding	-	CCDS85525.1	1	537	0	0	0.5	48.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031577	Tti2	ENSMUST00000209986	ENSMUSP00000147846	TRANSLATION	nonsense_mediated_decay	-	-	1	512	0	0	1.5	48.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031577	Tti2	ENSMUST00000098842	ENSMUSP00000096441	TRANSLATION	protein_coding	-	CCDS22221.1	1	512	0	0	1.5	48.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000003808	Farsa	ENSMUST00000129595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003808	Farsa	ENSMUST00000156970	ENSMUSP00000120609	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	1.7	0	24.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003808	Farsa	ENSMUST00000144404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003808	Farsa	ENSMUST00000109754	ENSMUSP00000105376	TRANSLATION	protein_coding	-	-	1	507	14	13.08	5.1	328.6	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000003808	Farsa	ENSMUST00000003906	ENSMUSP00000003906	TRANSLATION	protein_coding	-	CCDS22480.2	1	508	14	13.08	5.1	328.1	0	-4,-5	-	-	19.97	PRINCIPAL:2
ENSMUSG00000003808	Farsa	ENSMUST00000141480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052837	Junb	ENSMUST00000064922	ENSMUSP00000064680	TRANSLATION	protein_coding	-	CCDS22488.1	-	344	0	0.2	7.5	326.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031898	Dpep3	ENSMUST00000034371	ENSMUSP00000034371	TRANSLATION	protein_coding	-	CCDS22624.1	1	493	5	6.4	0.5	360.4	0	-1,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000004626	Stxbp2	ENSMUST00000159652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000160708	ENSMUSP00000125405	TRANSLATION	protein_coding	-	CCDS22067.1	1	593	0	15.75	8.8	431.6	0	-4,-6	-	-	14.958	PRINCIPAL:1
ENSMUSG00000004626	Stxbp2	ENSMUST00000159911	ENSMUSP00000147220	TRANSLATION	protein_coding	stop	-	3	119	0	3.076	0	41.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004626	Stxbp2	ENSMUST00000163044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000162974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000160435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004626	Stxbp2	ENSMUST00000159888	ENSMUSP00000146798	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004626	Stxbp2	ENSMUST00000004745	ENSMUSP00000004745	TRANSLATION	protein_coding	start	-	1	594	0	15.75	8.8	432.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004626	Stxbp2	ENSMUST00000162867	ENSMUSP00000146468	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004626	Stxbp2	ENSMUST00000162832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000159370	ENSMUSP00000147088	TRANSLATION	protein_coding	start	-	3	125	0	3	0	52.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004626	Stxbp2	ENSMUST00000161982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000161629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000162047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004626	Stxbp2	ENSMUST00000162737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036356	Csgalnact1	ENSMUST00000211871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036356	Csgalnact1	ENSMUST00000150083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036356	Csgalnact1	ENSMUST00000078350	ENSMUSP00000077459	TRANSLATION	protein_coding	-	CCDS22341.1	1	530	5	0	1.5	279.5	1	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000036356	Csgalnact1	ENSMUST00000139141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036356	Csgalnact1	ENSMUST00000143586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036356	Csgalnact1	ENSMUST00000125727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036356	Csgalnact1	ENSMUST00000136060	ENSMUSP00000116134	TRANSLATION	protein_coding	stop	-	1	300	0	0	0	58.2	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000036356	Csgalnact1	ENSMUST00000130214	ENSMUSP00000119817	TRANSLATION	protein_coding	-	CCDS22341.1	1	530	5	0	1.5	279.5	1	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000091764	Zfp964	ENSMUST00000169125	ENSMUSP00000129822	TRANSLATION	protein_coding	start	-	3	471	40	1.85	0.5	210.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091764	Zfp964	ENSMUST00000204062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091764	Zfp964	ENSMUST00000204285	ENSMUSP00000145354	TRANSLATION	protein_coding	-	CCDS85549.1	1	472	40	1.85	0.5	210.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033249	Hsf4	ENSMUST00000163734	ENSMUSP00000126278	TRANSLATION	protein_coding	-	CCDS57640.1	1	432	0	1.33	0.5	0	0	-4,-7	-	-	1.5	MINOR
ENSMUSG00000033249	Hsf4	ENSMUST00000173102	ENSMUSP00000133879	TRANSLATION	nonsense_mediated_decay	-	-	1	47	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033249	Hsf4	ENSMUST00000173859	ENSMUSP00000134213	TRANSLATION	protein_coding	-	CCDS57638.1	1	462	0	3.58	4.1	108.8	0	-4,-5	-	-	13.431	MINOR
ENSMUSG00000033249	Hsf4	ENSMUST00000174837	ENSMUSP00000134477	TRANSLATION	protein_coding	-	-	5	416	0	3.58	0	108.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000033249	Hsf4	ENSMUST00000172525	ENSMUSP00000134206	TRANSLATION	protein_coding	-	-	5	332	0	3.58	0	108.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000033249	Hsf4	ENSMUST00000036127	ENSMUSP00000048904	TRANSLATION	protein_coding	-	CCDS57639.1	1	492	0	3.58	7.5	108.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033249	Hsf4	ENSMUST00000173640	ENSMUSP00000133532	TRANSLATION	nonsense_mediated_decay	-	-	1	306	0	3.58	0	108.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042812	Foxf1	ENSMUST00000181504	ENSMUSP00000137662	TRANSLATION	protein_coding	-	CCDS22722.2	1	378	0	0.48	5.1	125.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031706	Rfx1	ENSMUST00000209362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031706	Rfx1	ENSMUST00000210660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031706	Rfx1	ENSMUST00000005600	ENSMUSP00000005600	TRANSLATION	protein_coding	-	CCDS22468.1	1	963	0	1.8	0.5	329.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000031706	Rfx1	ENSMUST00000211046	ENSMUSP00000147677	TRANSLATION	protein_coding	-	-	5	910	0	1.8	0	329.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031886	Ces2e	ENSMUST00000109410	ENSMUSP00000105037	TRANSLATION	protein_coding	-	CCDS22588.1	1	559	6	9	1.5	566.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031886	Ces2e	ENSMUST00000034355	ENSMUSP00000034355	TRANSLATION	protein_coding	-	CCDS22588.1	1	559	6	9	1.5	566.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000071104	Ccdc110	ENSMUST00000174815	ENSMUSP00000134510	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071104	Ccdc110	ENSMUST00000095326	ENSMUSP00000092964	TRANSLATION	protein_coding	-	CCDS22282.1	1	848	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000014837	4931428F04Rik	ENSMUST00000212529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014837	4931428F04Rik	ENSMUST00000014981	ENSMUSP00000014981	TRANSLATION	protein_coding	-	CCDS22596.1	1	467	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000014837	4931428F04Rik	ENSMUST00000171788	ENSMUSP00000128530	TRANSLATION	protein_coding	-	CCDS22596.1	5	467	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000014837	4931428F04Rik	ENSMUST00000212922	ENSMUSP00000148562	TRANSLATION	protein_coding	-	CCDS22596.1	1	467	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000014837	4931428F04Rik	ENSMUST00000212219	ENSMUSP00000148836	TRANSLATION	protein_coding	-	CCDS22596.1	1	467	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000031634	Ufsp2	ENSMUST00000210608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031634	Ufsp2	ENSMUST00000123307	ENSMUSP00000147971	TRANSLATION	nonsense_mediated_decay	-	-	3	117	0	3.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031634	Ufsp2	ENSMUST00000150943	ENSMUSP00000147305	TRANSLATION	protein_coding	stop	-	2	44	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031634	Ufsp2	ENSMUST00000209443	ENSMUSP00000147993	TRANSLATION	nonsense_mediated_decay	-	-	5	211	0	5.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031634	Ufsp2	ENSMUST00000034051	ENSMUSP00000034051	TRANSLATION	protein_coding	-	CCDS22284.1	1	461	0	11.58	2.7	182	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031634	Ufsp2	ENSMUST00000130412	ENSMUSP00000148122	TRANSLATION	nonsense_mediated_decay	-	-	2	81	0	2.58	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031634	Ufsp2	ENSMUST00000151983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031634	Ufsp2	ENSMUST00000210081	ENSMUSP00000147651	TRANSLATION	nonsense_mediated_decay	-	-	3	91	0	2.49	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031634	Ufsp2	ENSMUST00000123041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055675	Kbtbd11	ENSMUST00000183471	ENSMUSP00000139292	TRANSLATION	nonsense_mediated_decay	-	-	2	633	0	0.16	1.5	106.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055675	Kbtbd11	ENSMUST00000184598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055675	Kbtbd11	ENSMUST00000069399	ENSMUSP00000068321	TRANSLATION	protein_coding	-	CCDS52493.1	1	633	0	0.16	1.5	106.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055675	Kbtbd11	ENSMUST00000184243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037790	Defb7	ENSMUST00000047851	ENSMUSP00000045523	TRANSLATION	protein_coding	-	CCDS40261.1	1	71	0	1	0.5	32.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031516	Dctn6	ENSMUST00000155296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031516	Dctn6	ENSMUST00000153537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031516	Dctn6	ENSMUST00000143411	ENSMUSP00000117109	TRANSLATION	protein_coding	stop	-	3	103	0	2.96	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031516	Dctn6	ENSMUST00000118811	ENSMUSP00000113280	TRANSLATION	protein_coding	-	CCDS80871.1	3	185	12	5.41	0.5	24.2	0	-4,-5	-	-	17.34	MINOR
ENSMUSG00000031516	Dctn6	ENSMUST00000117243	ENSMUSP00000113716	TRANSLATION	protein_coding	-	CCDS80870.1	3	195	12	4.63	0.5	24.2	0	-4,-7	-	-	15.78	MINOR
ENSMUSG00000031516	Dctn6	ENSMUST00000142661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031516	Dctn6	ENSMUST00000123113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031516	Dctn6	ENSMUST00000131839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031516	Dctn6	ENSMUST00000152422	ENSMUSP00000120022	TRANSLATION	protein_coding	start	-	3	163	12	4.08	0	24.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031516	Dctn6	ENSMUST00000033913	ENSMUSP00000033913	TRANSLATION	protein_coding	-	CCDS22238.1	1	190	12	5.74	14.8	24.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000046408	1700067K01Rik	ENSMUST00000239176	ENSMUSP00000159263	TRANSLATION	protein_coding	-	-	-	355	0	0	1.2	212.8	0	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000046408	1700067K01Rik	ENSMUST00000140120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046408	1700067K01Rik	ENSMUST00000174570	ENSMUSP00000134486	TRANSLATION	nonsense_mediated_decay	-	-	1	298	0	0	0	149.7	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000046408	1700067K01Rik	ENSMUST00000060357	ENSMUSP00000062468	TRANSLATION	protein_coding	-	-	1	356	0	0	1.7	212.8	0	-3,-4	-	-	6	PRINCIPAL:3
ENSMUSG00000031691	Tnpo2	ENSMUST00000211601	ENSMUSP00000147583	TRANSLATION	protein_coding	-	-	1	887	0	21.58	8.8	108.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000031691	Tnpo2	ENSMUST00000210117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031691	Tnpo2	ENSMUST00000166592	ENSMUSP00000133076	TRANSLATION	protein_coding	-	CCDS22491.1	5	897	0	21.415	8.8	108.3	0	-4,-5	-	-	14.67	PRINCIPAL:2
ENSMUSG00000031691	Tnpo2	ENSMUST00000210945	ENSMUSP00000148185	TRANSLATION	protein_coding	stop	-	5	137	0	3.5	0	60.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031691	Tnpo2	ENSMUST00000093360	ENSMUSP00000091051	TRANSLATION	protein_coding	-	CCDS22491.1	1	897	0	21.415	8.8	108.3	0	-4,-5	-	-	14.67	PRINCIPAL:2
ENSMUSG00000031691	Tnpo2	ENSMUST00000210576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031691	Tnpo2	ENSMUST00000210461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031562	Dctd	ENSMUST00000033966	ENSMUSP00000033966	TRANSLATION	protein_coding	-	CCDS22302.2	1	184	4	4.75	1.5	97.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031562	Dctd	ENSMUST00000170263	ENSMUSP00000126733	TRANSLATION	protein_coding	-	CCDS22302.2	1	184	4	4.75	1.5	97.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031562	Dctd	ENSMUST00000174379	ENSMUSP00000134195	TRANSLATION	protein_coding	-	-	3	104	0	2	0	37.4	0	-4,-5	-	-	2.79	MINOR
ENSMUSG00000031562	Dctd	ENSMUST00000098773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031562	Dctd	ENSMUST00000174278	ENSMUSP00000133445	TRANSLATION	protein_coding	-	CCDS22302.2	3	184	4	4.75	1.5	97.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031562	Dctd	ENSMUST00000174818	ENSMUSP00000134003	TRANSLATION	nonsense_mediated_decay	-	-	1	150	4	3	0.5	87.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031562	Dctd	ENSMUST00000173991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038398	Upf3a	ENSMUST00000211643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038398	Upf3a	ENSMUST00000211724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038398	Upf3a	ENSMUST00000043767	ENSMUSP00000037354	TRANSLATION	protein_coding	-	CCDS40235.1	1	422	0	3	0.5	174	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000004565	Pnpla6	ENSMUST00000208914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000207424	ENSMUSP00000147227	TRANSLATION	protein_coding	stop	-	5	201	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000208310	ENSMUSP00000146847	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000208691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000207929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000208006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000207146	ENSMUSP00000146441	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000208002	ENSMUSP00000146680	TRANSLATION	protein_coding	-	CCDS85487.1	1	1345	0	7.925	0.5	250.4	3	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000004565	Pnpla6	ENSMUST00000208370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000207941	ENSMUSP00000146555	TRANSLATION	protein_coding	-	-	1	1316	0	7.11	0	225.3	3	-4,-5	-	-	8.862	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000208851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000208315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000208762	ENSMUSP00000147213	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000207430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004565	Pnpla6	ENSMUST00000111070	ENSMUSP00000106699	TRANSLATION	protein_coding	-	CCDS40206.1	5	1327	0	7.925	4.1	250.4	3	-2,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000004565	Pnpla6	ENSMUST00000004681	ENSMUSP00000004681	TRANSLATION	protein_coding	-	CCDS40206.1	1	1327	0	7.925	4.1	250.4	3	-2,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000004565	Pnpla6	ENSMUST00000207317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004565	Pnpla6	ENSMUST00000207299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004565	Pnpla6	ENSMUST00000207336	ENSMUSP00000146543	TRANSLATION	protein_coding	start/stop	-	5	207	0	1.94	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004565	Pnpla6	ENSMUST00000207421	ENSMUSP00000146377	TRANSLATION	protein_coding	start/stop	-	3	224	0	3.64	0	79.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031765	Mt1	ENSMUST00000211807	ENSMUSP00000148764	TRANSLATION	protein_coding	-	-	-	37	1	0.33	0	0	0	-4,-5	-	-	1.938	MINOR
ENSMUSG00000031765	Mt1	ENSMUST00000034215	ENSMUSP00000034215	TRANSLATION	protein_coding	-	CCDS40438.1	1	61	7	1.83	7.5	68.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031765	Mt1	ENSMUST00000212291	ENSMUSP00000148443	TRANSLATION	protein_coding	-	-	2	132	7	1.83	0.5	64.5	0	-4,-5	-	-	17.652	MINOR
ENSMUSG00000109941	Exosc6	ENSMUST00000210390	ENSMUSP00000147696	TRANSLATION	protein_coding	-	CCDS85611.1	-	273	0	1	1.7	92.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064325	Hhip	ENSMUST00000079038	ENSMUSP00000078047	TRANSLATION	protein_coding	-	CCDS22440.1	1	700	2	10.35	7.5	81	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000064325	Hhip	ENSMUST00000155850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031825	Crispld2	ENSMUST00000034282	ENSMUSP00000034282	TRANSLATION	protein_coding	-	CCDS80939.1	1	495	2	5.1	1.5	250.1	0	3,-2	-	-	14	ALTERNATIVE:2
ENSMUSG00000031825	Crispld2	ENSMUST00000151629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031825	Crispld2	ENSMUST00000144801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031825	Crispld2	ENSMUST00000132583	ENSMUSP00000122962	TRANSLATION	protein_coding	-	CCDS22714.1	1	494	2	5.1	1.5	250.1	0	3,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000031825	Crispld2	ENSMUST00000108972	ENSMUSP00000104600	TRANSLATION	protein_coding	-	CCDS22714.1	1	494	2	5.1	1.5	250.1	0	3,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000036442	Thap11	ENSMUST00000040445	ENSMUSP00000048994	TRANSLATION	protein_coding	-	CCDS22616.1	-	305	5	0.6	3.9	44.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000743	Chmp1a	ENSMUST00000000759	ENSMUSP00000000759	TRANSLATION	protein_coding	-	CCDS40509.1	1	196	0	0	19.5	47.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000000743	Chmp1a	ENSMUST00000167655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000743	Chmp1a	ENSMUST00000212107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000743	Chmp1a	ENSMUST00000172336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031444	F10	ENSMUST00000152034	ENSMUSP00000117312	TRANSLATION	protein_coding	-	-	5	319	29	5.03	0	199.1	0	2,-3	-	-	1.998	MINOR
ENSMUSG00000031444	F10	ENSMUST00000063820	ENSMUSP00000068389	TRANSLATION	protein_coding	-	CCDS40226.1	1	481	38	7.03	1.5	384.6	0	2,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000031444	F10	ENSMUST00000128418	ENSMUSP00000121830	TRANSLATION	protein_coding	-	-	5	321	29	5.03	0	200.6	0	2,-3	-	-	1.998	MINOR
ENSMUSG00000031444	F10	ENSMUST00000123768	ENSMUSP00000116984	TRANSLATION	protein_coding	stop	-	2	119	28	2.33	0	109.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000031444	F10	ENSMUST00000033821	ENSMUSP00000033821	TRANSLATION	protein_coding	-	CCDS57606.1	1	493	38	7.03	0.5	384.6	0	-1,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000031681	Smad1	ENSMUST00000066091	ENSMUSP00000071035	TRANSLATION	protein_coding	-	CCDS22437.1	1	465	4	4.8	15	396.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000031681	Smad1	ENSMUST00000210678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031681	Smad1	ENSMUST00000066081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031681	Smad1	ENSMUST00000109885	ENSMUSP00000105511	TRANSLATION	protein_coding	-	-	1	428	4	3.8	0	340.1	0	-4,-7	-	-	10.636	MINOR
ENSMUSG00000031681	Smad1	ENSMUST00000215983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074384	AI429214	ENSMUST00000098825	ENSMUSP00000096424	TRANSLATION	protein_coding	-	CCDS22250.1	-	293	0	0	1.5	149.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031543	Ank1	ENSMUST00000141784	ENSMUSP00000117966	TRANSLATION	protein_coding	-	-	5	1863	0	33.275	0	742.2	0	-4,-7	-	-	9.354	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000173248	ENSMUSP00000133322	TRANSLATION	protein_coding	-	CCDS72102.1	1	1852	0	33.873	0.5	766.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031543	Ank1	ENSMUST00000135206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031543	Ank1	ENSMUST00000121802	ENSMUSP00000113571	TRANSLATION	protein_coding	-	CCDS52523.1	1	1907	0	33.473	0.5	703.7	0	-4,-5	-	-	7.44	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000117270	ENSMUSP00000113495	TRANSLATION	protein_coding	-	-	5	1883	0	33.473	0.5	742.2	0	-4,-5	-	-	9.75	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000123418	ENSMUSP00000121785	TRANSLATION	nonsense_mediated_decay	-	-	1	572	0	13.4	0	391.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000110688	ENSMUSP00000106316	TRANSLATION	protein_coding	-	CCDS72099.1	1	1744	0	33.275	0.5	766.4	0	-4,-5	-	-	10.806	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000121075	ENSMUSP00000112966	TRANSLATION	protein_coding	-	CCDS80864.1	1	155	0	0	5.3	0	0	3,-2	-	-	2	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000084038	ENSMUSP00000081051	TRANSLATION	protein_coding	-	CCDS22187.1	1	1848	0	33.873	0.5	766.4	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000031543	Ank1	ENSMUST00000118733	ENSMUSP00000112850	TRANSLATION	protein_coding	-	CCDS72103.1	1	1878	0	33.873	0.5	742.2	0	-4,-2	-	-	10.548	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000117296	ENSMUSP00000113656	TRANSLATION	protein_coding	-	CCDS72101.1	1	1887	0	33.275	0.5	703.7	0	-4,-7	-	-	7.044	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000174435	ENSMUSP00000133668	TRANSLATION	protein_coding	stop	-	5	109	0	0	1.2	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000117662	ENSMUSP00000113531	TRANSLATION	protein_coding	-	CCDS72100.1	1	1862	0	33.275	0.5	742.2	0	-4,-7	-	-	9.354	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000173573	ENSMUSP00000133901	TRANSLATION	nonsense_mediated_decay	-	-	1	1057	0	23.88	0	692.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000033947	ENSMUSP00000033947	TRANSLATION	protein_coding	-	CCDS80865.1	1	156	0	0	5.3	0	0	3,-2	-	-	2	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000152511	ENSMUSP00000116533	TRANSLATION	protein_coding	start	-	1	1098	0	22.275	0	469.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031543	Ank1	ENSMUST00000130311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052488	Cherp	ENSMUST00000212016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052488	Cherp	ENSMUST00000212070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052488	Cherp	ENSMUST00000212548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052488	Cherp	ENSMUST00000212870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052488	Cherp	ENSMUST00000079510	ENSMUSP00000078469	TRANSLATION	protein_coding	-	-	1	949	0	1.264	1.5	162.4	0	-4,-5	-	-	11.58	ALTERNATIVE:2
ENSMUSG00000052488	Cherp	ENSMUST00000212991	ENSMUSP00000148273	TRANSLATION	protein_coding	-	CCDS40389.1	1	938	0	1.264	0.5	169.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000052488	Cherp	ENSMUST00000212586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004637	Wwox	ENSMUST00000160862	ENSMUSP00000125626	TRANSLATION	protein_coding	-	-	1	354	30	5.56	4	149.1	0	-4,-5	-	-	17.894	MINOR
ENSMUSG00000004637	Wwox	ENSMUST00000159870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004637	Wwox	ENSMUST00000160205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004637	Wwox	ENSMUST00000162052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004637	Wwox	ENSMUST00000004756	ENSMUSP00000004756	TRANSLATION	protein_coding	-	CCDS22691.1	1	414	30	6.12	12.8	149.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004637	Wwox	ENSMUST00000109107	ENSMUSP00000104735	TRANSLATION	protein_coding	-	-	1	158	2	2.9	0	68.9	0	-4,-5	-	-	1.188	MINOR
ENSMUSG00000004637	Wwox	ENSMUST00000109108	ENSMUSP00000104736	TRANSLATION	protein_coding	-	-	1	367	30	5.86	0.5	149.1	0	-4,-5	-	-	17.478	MINOR
ENSMUSG00000004637	Wwox	ENSMUST00000160005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004637	Wwox	ENSMUST00000161753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057060	Slc35f3	ENSMUST00000238518	ENSMUSP00000158727	TRANSLATION	protein_coding	-	-	-	490	0	0	10.4	28	11	-4,-2	-	-	9.188	ALTERNATIVE:1
ENSMUSG00000057060	Slc35f3	ENSMUST00000238386	ENSMUSP00000158619	TRANSLATION	protein_coding	-	-	-	327	0	0	0	28	9	-4,-2	-	-	6	MINOR
ENSMUSG00000057060	Slc35f3	ENSMUST00000108759	ENSMUSP00000104390	TRANSLATION	protein_coding	-	CCDS40520.1	1	421	0	0	12.8	28	11	-3,-6	-	-	10	PRINCIPAL:2
ENSMUSG00000071113	Mboat4	ENSMUST00000095345	ENSMUSP00000092988	TRANSLATION	protein_coding	-	CCDS52540.1	1	435	0	0	3.9	45.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033579	Fa2h	ENSMUST00000162216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033579	Fa2h	ENSMUST00000038475	ENSMUSP00000043597	TRANSLATION	protein_coding	-	CCDS22674.1	1	372	20	3.46	2.9	121	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033579	Fa2h	ENSMUST00000159336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033579	Fa2h	ENSMUST00000162463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074037	Mc1r	ENSMUST00000098324	ENSMUSP00000095929	TRANSLATION	protein_coding	-	CCDS22756.1	-	315	0	0.4	2.7	105.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038515	Grtp1	ENSMUST00000209516	ENSMUSP00000147466	TRANSLATION	nonsense_mediated_decay	start	-	3	30	0	0.12	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038515	Grtp1	ENSMUST00000209895	ENSMUSP00000148073	TRANSLATION	nonsense_mediated_decay	-	-	1	197	0	2.76	0	100.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038515	Grtp1	ENSMUST00000165605	ENSMUSP00000130324	TRANSLATION	protein_coding	-	-	1	359	0	4.93	0	165.8	0	-4,-7	-	-	10.62	MINOR
ENSMUSG00000038515	Grtp1	ENSMUST00000210317	ENSMUSP00000148042	TRANSLATION	protein_coding	-	CCDS22107.1	1	342	0	4.93	5.1	188.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038515	Grtp1	ENSMUST00000209691	ENSMUSP00000147856	TRANSLATION	protein_coding	-	-	5	289	0	4.13	1	166.5	0	-4,-2	-	-	9.06	MINOR
ENSMUSG00000038515	Grtp1	ENSMUST00000211128	ENSMUSP00000147337	TRANSLATION	protein_coding	-	-	1	321	0	4.48	0.5	188.8	0	-4,-7	-	-	11.1	MINOR
ENSMUSG00000038515	Grtp1	ENSMUST00000209465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064125	Prr36	ENSMUST00000176227	ENSMUSP00000135166	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064125	Prr36	ENSMUST00000175906	ENSMUSP00000135713	TRANSLATION	protein_coding	stop	-	3	155	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064125	Prr36	ENSMUST00000168386	ENSMUSP00000133114	TRANSLATION	protein_coding	-	CCDS52473.1	5	1098	0	0	0.5	83.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000064125	Prr36	ENSMUST00000177491	ENSMUSP00000135130	TRANSLATION	protein_coding	stop	-	3	205	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050930	Map10	ENSMUST00000053078	ENSMUSP00000061679	TRANSLATION	protein_coding	-	CCDS22780.1	-	891	0	0	0.5	431.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000070056	Mfhas1	ENSMUST00000154989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070056	Mfhas1	ENSMUST00000209953	ENSMUSP00000147927	TRANSLATION	protein_coding	start	-	1	757	15	0.2	0	78.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070056	Mfhas1	ENSMUST00000037666	ENSMUSP00000044135	TRANSLATION	protein_coding	-	CCDS40319.1	1	1048	15	0.84	3.9	154.5	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000031844	Hsd17b2	ENSMUST00000034304	ENSMUSP00000034304	TRANSLATION	protein_coding	-	CCDS40491.1	1	381	27	2.92	1.5	159.5	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031844	Hsd17b2	ENSMUST00000212998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031844	Hsd17b2	ENSMUST00000212052	ENSMUSP00000148323	TRANSLATION	nonsense_mediated_decay	start	-	2	124	0	0.32	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000070003	Ssbp4	ENSMUST00000210305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070003	Ssbp4	ENSMUST00000210382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000210699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000210580	ENSMUSP00000148255	TRANSLATION	protein_coding	stop	-	5	196	0	0	0	81.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070003	Ssbp4	ENSMUST00000210756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000211153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000211608	ENSMUSP00000147589	TRANSLATION	protein_coding	stop	-	3	164	0	0	0	50.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070003	Ssbp4	ENSMUST00000211134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000211197	ENSMUSP00000147638	TRANSLATION	nonsense_mediated_decay	-	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070003	Ssbp4	ENSMUST00000210369	ENSMUSP00000147704	TRANSLATION	protein_coding	-	-	2	286	0	0	0	191.6	0	-4,-7	-	-	6	MINOR
ENSMUSG00000070003	Ssbp4	ENSMUST00000049908	ENSMUSP00000059039	TRANSLATION	protein_coding	-	CCDS22374.1	1	363	0	0	6.3	191.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000070003	Ssbp4	ENSMUST00000211488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000211268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070003	Ssbp4	ENSMUST00000210006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070003	Ssbp4	ENSMUST00000209430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074194	Zfp791	ENSMUST00000211109	ENSMUSP00000147335	TRANSLATION	protein_coding	-	CCDS40419.1	1	528	60	1.6	0.5	302.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074194	Zfp791	ENSMUST00000098550	ENSMUSP00000096150	TRANSLATION	protein_coding	-	CCDS40419.1	1	528	60	1.6	0.5	302.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053886	Sh2d4a	ENSMUST00000212166	ENSMUSP00000148702	TRANSLATION	protein_coding	start	-	1	390	0	1.27	0	47.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053886	Sh2d4a	ENSMUST00000066594	ENSMUSP00000070825	TRANSLATION	protein_coding	-	CCDS52564.1	1	421	0	1.64	1.5	47.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031622	Sin3b	ENSMUST00000212435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031622	Sin3b	ENSMUST00000212096	ENSMUSP00000148599	TRANSLATION	protein_coding	stop	-	3	207	0	3	0	62.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031622	Sin3b	ENSMUST00000212256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031622	Sin3b	ENSMUST00000212677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031622	Sin3b	ENSMUST00000109950	ENSMUSP00000105576	TRANSLATION	protein_coding	-	CCDS52598.1	1	293	0	5	1.5	125.9	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031622	Sin3b	ENSMUST00000213079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031622	Sin3b	ENSMUST00000004494	ENSMUSP00000004494	TRANSLATION	protein_coding	-	CCDS52599.1	1	1098	0	9.6	0.5	578.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031622	Sin3b	ENSMUST00000212095	ENSMUSP00000148407	TRANSLATION	protein_coding	-	-	1	302	0	5	0	125.9	0	-4,-7	-	-	0	MINOR
ENSMUSG00000013150	Gfod2	ENSMUST00000155038	ENSMUSP00000122772	TRANSLATION	protein_coding	-	-	2	159	0	0.6	0	32.2	0	-2,0	-	-	6.96	MINOR
ENSMUSG00000013150	Gfod2	ENSMUST00000013294	ENSMUSP00000013294	TRANSLATION	protein_coding	-	CCDS22612.1	1	385	2	1.29	14.8	46.3	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000013150	Gfod2	ENSMUST00000135959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045337	Defb11	ENSMUST00000051965	ENSMUSP00000053932	TRANSLATION	protein_coding	-	CCDS52515.1	1	77	0	0	0.5	44.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000055730	Ces2a	ENSMUST00000161824	ENSMUSP00000148699	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055730	Ces2a	ENSMUST00000034346	ENSMUSP00000034346	TRANSLATION	protein_coding	-	CCDS22585.1	1	558	6	9.81	1.5	549.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000055730	Ces2a	ENSMUST00000164182	ENSMUSP00000127346	TRANSLATION	protein_coding	-	CCDS52650.1	1	525	6	8.81	0.5	505.8	0	4,-1	-	-	13.38	MINOR
ENSMUSG00000055730	Ces2a	ENSMUST00000159303	ENSMUSP00000148459	TRANSLATION	protein_coding	start	-	3	119	1	2.19	0	90.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031959	Wdr59	ENSMUST00000211981	ENSMUSP00000148397	TRANSLATION	protein_coding	-	CCDS22675.1	1	991	0	5.39	0.5	82	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031959	Wdr59	ENSMUST00000212327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031959	Wdr59	ENSMUST00000038193	ENSMUSP00000043671	TRANSLATION	protein_coding	-	CCDS85613.1	1	974	0	5.39	9.6	82	0	-4,-5	-	-	14.634	ALTERNATIVE:1
ENSMUSG00000031959	Wdr59	ENSMUST00000034437	ENSMUSP00000034437	TRANSLATION	protein_coding	-	CCDS52672.1	1	993	0	5.39	10.8	82	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000129797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000125211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000123290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000006435	ENSMUSP00000006435	TRANSLATION	protein_coding	-	CCDS40358.1	1	511	0	12.2	7.5	277.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000153680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006273	Atp6v1b2	ENSMUST00000153079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034224	Slc38a8	ENSMUST00000036748	ENSMUSP00000038438	TRANSLATION	protein_coding	-	CCDS22706.1	1	432	0	0	1.5	189.7	13	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034224	Slc38a8	ENSMUST00000125594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034224	Slc38a8	ENSMUST00000132838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034224	Slc38a8	ENSMUST00000133821	ENSMUSP00000123094	TRANSLATION	protein_coding	stop	-	3	165	0	0	0	69	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000034224	Slc38a8	ENSMUST00000138061	ENSMUSP00000119987	TRANSLATION	protein_coding	stop	-	3	206	0	0	0	83	7	-3,-5	-	-	-1	MINOR
ENSMUSG00000031790	Mmp15	ENSMUST00000034243	ENSMUSP00000034243	TRANSLATION	protein_coding	-	CCDS22561.1	1	657	20	7.04	1.5	524.6	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000031790	Mmp15	ENSMUST00000212235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031913	Vps4a	ENSMUST00000144527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031913	Vps4a	ENSMUST00000034388	ENSMUSP00000034388	TRANSLATION	protein_coding	-	CCDS40463.1	1	437	11	9.83	16.2	319.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031913	Vps4a	ENSMUST00000132096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031667	Aktip	ENSMUST00000120213	ENSMUSP00000112375	TRANSLATION	protein_coding	-	CCDS22519.1	1	292	0	2.57	15.7	82.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031667	Aktip	ENSMUST00000211050	ENSMUSP00000147768	TRANSLATION	nonsense_mediated_decay	start	-	3	32	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031667	Aktip	ENSMUST00000153201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031667	Aktip	ENSMUST00000120349	ENSMUSP00000113769	TRANSLATION	protein_coding	-	CCDS22519.1	1	292	0	2.57	15.7	82.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031667	Aktip	ENSMUST00000209444	ENSMUSP00000148050	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031667	Aktip	ENSMUST00000211576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031667	Aktip	ENSMUST00000211618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031667	Aktip	ENSMUST00000211042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031667	Aktip	ENSMUST00000210426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031667	Aktip	ENSMUST00000109609	ENSMUSP00000105238	TRANSLATION	protein_coding	-	CCDS22519.1	1	292	0	2.57	15.7	82.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031667	Aktip	ENSMUST00000125257	ENSMUSP00000119277	TRANSLATION	protein_coding	-	CCDS22519.1	1	292	0	2.57	15.7	82.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031667	Aktip	ENSMUST00000120426	ENSMUSP00000113379	TRANSLATION	protein_coding	-	CCDS85582.1	1	258	0	2.57	3	82.3	0	-4,-6	-	-	12.544	MINOR
ENSMUSG00000031667	Aktip	ENSMUST00000209311	ENSMUSP00000147841	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031813	Mvb12a	ENSMUST00000212954	ENSMUSP00000148630	TRANSLATION	nonsense_mediated_decay	-	-	3	72	0	0.63	0	32.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031813	Mvb12a	ENSMUST00000034272	ENSMUSP00000034272	TRANSLATION	protein_coding	-	CCDS22398.1	1	271	0	2.174	1.5	217	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031813	Mvb12a	ENSMUST00000212659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031813	Mvb12a	ENSMUST00000212234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031813	Mvb12a	ENSMUST00000212326	ENSMUSP00000148449	TRANSLATION	nonsense_mediated_decay	-	-	3	137	0	1.43	0.5	65.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031813	Mvb12a	ENSMUST00000212341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031813	Mvb12a	ENSMUST00000212336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044014	Npy5r	ENSMUST00000211920	ENSMUSP00000148410	TRANSLATION	protein_coding	-	CCDS22335.1	5	466	0	0.3	0.5	160.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044014	Npy5r	ENSMUST00000070810	ENSMUSP00000065157	TRANSLATION	protein_coding	-	CCDS22335.1	1	466	0	0.3	0.5	160.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044014	Npy5r	ENSMUST00000212563	ENSMUSP00000148589	TRANSLATION	protein_coding	-	CCDS22335.1	1	466	0	0.3	0.5	160.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095026	Gm3336	ENSMUST00000213065	ENSMUSP00000148772	TRANSLATION	protein_coding	-	-	1	95	0	0	0	0	1	1,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000095026	Gm3336	ENSMUST00000179347	ENSMUSP00000136399	TRANSLATION	protein_coding	-	CCDS57624.1	5	198	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000034472	Rasd2	ENSMUST00000132133	ENSMUSP00000120717	TRANSLATION	protein_coding	-	CCDS52602.1	1	266	20	1.48	17	132.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000034472	Rasd2	ENSMUST00000139848	ENSMUSP00000118070	TRANSLATION	protein_coding	-	CCDS52602.1	1	266	20	1.48	17	132.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000031875	Cmtm3	ENSMUST00000212139	ENSMUSP00000148338	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000031875	Cmtm3	ENSMUST00000212948	ENSMUSP00000148628	TRANSLATION	protein_coding	stop	-	3	142	0	0	0	34.3	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000031875	Cmtm3	ENSMUST00000212734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031875	Cmtm3	ENSMUST00000212399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031875	Cmtm3	ENSMUST00000034343	ENSMUSP00000034343	TRANSLATION	protein_coding	-	CCDS22577.1	1	184	0	0	3.9	39.4	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000031875	Cmtm3	ENSMUST00000211996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031875	Cmtm3	ENSMUST00000212081	ENSMUSP00000148682	TRANSLATION	protein_coding	-	CCDS22577.1	5	184	0	0	3.9	39.4	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000031875	Cmtm3	ENSMUST00000211885	ENSMUSP00000148513	TRANSLATION	protein_coding	stop	-	3	82	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000052456	Asna1	ENSMUST00000064314	ENSMUSP00000065337	TRANSLATION	protein_coding	-	CCDS40417.1	1	348	19	6.8	10.8	418.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000052456	Asna1	ENSMUST00000211702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052456	Asna1	ENSMUST00000209834	ENSMUSP00000147483	TRANSLATION	nonsense_mediated_decay	start	-	3	131	9	2.18	0	117.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052456	Asna1	ENSMUST00000211221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042269	Fam92b	ENSMUST00000153177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042269	Fam92b	ENSMUST00000135567	ENSMUSP00000134033	TRANSLATION	protein_coding	stop	-	5	121	0	0	0	76.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042269	Fam92b	ENSMUST00000142478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042269	Fam92b	ENSMUST00000048786	ENSMUSP00000038825	TRANSLATION	protein_coding	-	CCDS22717.1	5	292	0	0	1.5	212.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041949	Tango6	ENSMUST00000048359	ENSMUSP00000043953	TRANSLATION	protein_coding	-	CCDS22639.1	1	1079	0	0	0.5	150.1	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041949	Tango6	ENSMUST00000212764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041949	Tango6	ENSMUST00000211979	ENSMUSP00000148400	TRANSLATION	protein_coding	-	-	1	481	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000031556	Tm2d2	ENSMUST00000033961	ENSMUSP00000033961	TRANSLATION	protein_coding	-	CCDS22197.1	1	213	0	0	7.5	55.1	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000031556	Tm2d2	ENSMUST00000210536	ENSMUSP00000148166	TRANSLATION	protein_coding	-	-	3	112	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000031556	Tm2d2	ENSMUST00000210758	ENSMUSP00000148091	TRANSLATION	nonsense_mediated_decay	-	-	1	221	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000033732	Sf3b3	ENSMUST00000212182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033732	Sf3b3	ENSMUST00000212613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033732	Sf3b3	ENSMUST00000212843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033732	Sf3b3	ENSMUST00000042012	ENSMUSP00000045073	TRANSLATION	protein_coding	-	CCDS22665.1	1	1217	0	24.5	18.2	336.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000033732	Sf3b3	ENSMUST00000212515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036270	Edc4	ENSMUST00000145618	ENSMUSP00000118162	TRANSLATION	protein_coding	start/stop	-	5	265	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036270	Edc4	ENSMUST00000156357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036270	Edc4	ENSMUST00000139154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036270	Edc4	ENSMUST00000136048	ENSMUSP00000114285	TRANSLATION	nonsense_mediated_decay	-	-	5	1318	0	3.01	0	324.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036270	Edc4	ENSMUST00000132680	ENSMUSP00000114209	TRANSLATION	protein_coding	start/stop	-	5	427	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036270	Edc4	ENSMUST00000119261	ENSMUSP00000113854	TRANSLATION	protein_coding	-	CCDS52662.1	1	1390	0	3.43	0.5	482.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036270	Edc4	ENSMUST00000040254	ENSMUSP00000039134	TRANSLATION	protein_coding	-	CCDS80923.1	1	1406	0	3.43	1.5	482.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002343	Armc6	ENSMUST00000147387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002343	Armc6	ENSMUST00000136666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002343	Armc6	ENSMUST00000139765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002343	Armc6	ENSMUST00000019679	ENSMUSP00000019679	TRANSLATION	protein_coding	-	CCDS40371.1	1	468	0	2.54	1.7	51.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002343	Armc6	ENSMUST00000130319	ENSMUSP00000116811	TRANSLATION	protein_coding	stop	-	5	120	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002343	Armc6	ENSMUST00000135931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005481	Ddx39	ENSMUST00000127505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005481	Ddx39	ENSMUST00000172396	ENSMUSP00000132222	TRANSLATION	protein_coding	-	CCDS22460.1	1	427	12	9	10.8	214.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005481	Ddx39	ENSMUST00000140521	ENSMUSP00000116101	TRANSLATION	nonsense_mediated_decay	-	-	2	208	11	4	0	112.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005481	Ddx39	ENSMUST00000109810	ENSMUSP00000105435	TRANSLATION	protein_coding	-	CCDS22460.1	5	427	12	9	10.8	214.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005481	Ddx39	ENSMUST00000138789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005481	Ddx39	ENSMUST00000019576	ENSMUSP00000019576	TRANSLATION	protein_coding	-	CCDS22460.1	1	427	12	9	10.8	214.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000005481	Ddx39	ENSMUST00000212949	ENSMUSP00000148329	TRANSLATION	nonsense_mediated_decay	-	-	1	427	12	9	10.8	214.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031902	Nfatc3	ENSMUST00000109308	ENSMUSP00000104931	TRANSLATION	protein_coding	-	CCDS22628.1	1	1076	0	5.4	1.5	169.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000031902	Nfatc3	ENSMUST00000212577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031902	Nfatc3	ENSMUST00000211991	ENSMUSP00000148556	TRANSLATION	protein_coding	-	-	1	1060	0	5.4	0	169.1	0	-2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031902	Nfatc3	ENSMUST00000212742	ENSMUSP00000148551	TRANSLATION	protein_coding	-	-	1	1068	0	5.4	0	169.1	0	-2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031902	Nfatc3	ENSMUST00000212691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031902	Nfatc3	ENSMUST00000212671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031902	Nfatc3	ENSMUST00000212936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009630	Ppp2cb	ENSMUST00000009774	ENSMUSP00000009774	TRANSLATION	protein_coding	-	CCDS22233.1	1	309	10	6.75	19.5	121.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031826	Usp10	ENSMUST00000142432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000125066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000108988	ENSMUSP00000104616	TRANSLATION	protein_coding	-	CCDS80938.1	1	792	4	6.355	1.5	170.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000031826	Usp10	ENSMUST00000139648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031826	Usp10	ENSMUST00000143615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031826	Usp10	ENSMUST00000135210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031826	Usp10	ENSMUST00000144458	ENSMUSP00000123590	TRANSLATION	protein_coding	-	CCDS40495.1	1	793	4	6.355	1.5	170.3	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000031826	Usp10	ENSMUST00000134729	ENSMUSP00000134182	TRANSLATION	protein_coding	start	-	3	88	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031826	Usp10	ENSMUST00000137310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000148767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000211935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000212612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031826	Usp10	ENSMUST00000108982	ENSMUSP00000104610	TRANSLATION	protein_coding	stop	-	5	114	0	1.655	0	26	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050147	F2rl3	ENSMUST00000058099	ENSMUSP00000054426	TRANSLATION	protein_coding	-	CCDS22419.1	1	396	0	0.6	0.5	123.3	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050147	F2rl3	ENSMUST00000212755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031891	Hsd11b2	ENSMUST00000034363	ENSMUSP00000034363	TRANSLATION	protein_coding	-	CCDS40460.1	1	386	27	2.38	0.5	153.9	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000001065	Zfp276	ENSMUST00000146158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001065	Zfp276	ENSMUST00000156896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001065	Zfp276	ENSMUST00000001092	ENSMUSP00000001092	TRANSLATION	protein_coding	-	CCDS52699.1	1	614	24	2.8	2.9	85	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001065	Zfp276	ENSMUST00000154450	ENSMUSP00000119771	TRANSLATION	protein_coding	stop	-	3	233	6	0.36	0	42.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001065	Zfp276	ENSMUST00000147312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001065	Zfp276	ENSMUST00000150356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001065	Zfp276	ENSMUST00000211828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001065	Zfp276	ENSMUST00000130333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074247	Dda1	ENSMUST00000098645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074247	Dda1	ENSMUST00000146677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074247	Dda1	ENSMUST00000147843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074247	Dda1	ENSMUST00000147642	ENSMUSP00000123665	TRANSLATION	protein_coding	-	CCDS80894.1	2	100	0	0	0.5	57.3	0	-4,-7	-	-	3.156	MINOR
ENSMUSG00000074247	Dda1	ENSMUST00000150984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074247	Dda1	ENSMUST00000124745	ENSMUSP00000121042	TRANSLATION	protein_coding	-	CCDS52584.1	1	102	0	0	19.5	104.7	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000074247	Dda1	ENSMUST00000135052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074247	Dda1	ENSMUST00000130098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074247	Dda1	ENSMUST00000127885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074247	Dda1	ENSMUST00000138892	ENSMUSP00000122367	TRANSLATION	protein_coding	-	-	3	37	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074247	Dda1	ENSMUST00000139904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000106824	Gm7697	ENSMUST00000201500	ENSMUSP00000144181	TRANSLATION	protein_coding	-	-	1	350	0	3.15	0.5	94.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031970	Dbndd1	ENSMUST00000176286	ENSMUSP00000134757	TRANSLATION	protein_coding	-	CCDS52701.2	1	96	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000031970	Dbndd1	ENSMUST00000176155	ENSMUSP00000135524	TRANSLATION	protein_coding	-	CCDS22761.3	1	194	0	0	0.5	154.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031970	Dbndd1	ENSMUST00000177240	ENSMUSP00000135216	TRANSLATION	protein_coding	-	CCDS52702.2	1	147	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000031984	2810004N23Rik	ENSMUST00000212808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031984	2810004N23Rik	ENSMUST00000034465	ENSMUSP00000034465	TRANSLATION	protein_coding	-	CCDS22775.1	1	281	0	0	1.5	113.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031984	2810004N23Rik	ENSMUST00000211971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046354	Defb14	ENSMUST00000052601	ENSMUSP00000062781	TRANSLATION	protein_coding	-	CCDS40253.1	1	67	0	1	1.5	39.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078840	Gm10999	ENSMUST00000108743	ENSMUSP00000104376	TRANSLATION	protein_coding	start/stop	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000057116	AF366264	ENSMUST00000071308	ENSMUSP00000096518	TRANSLATION	protein_coding	-	CCDS52490.1	-	502	5	0.8	0.5	146.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000031982	Arv1	ENSMUST00000034463	ENSMUSP00000034463	TRANSLATION	protein_coding	-	CCDS22774.1	1	266	4	0	1.5	219.4	6	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000031982	Arv1	ENSMUST00000212036	ENSMUSP00000148475	TRANSLATION	nonsense_mediated_decay	-	-	1	112	4	0	0	108.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031982	Arv1	ENSMUST00000212959	ENSMUSP00000148335	TRANSLATION	protein_coding	start	-	1	149	0	0	0	74.1	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000128972	ENSMUSP00000121864	TRANSLATION	protein_coding	-	-	2	258	3	7.25	0	0	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000126029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000109736	ENSMUSP00000105358	TRANSLATION	protein_coding	-	CCDS22486.1	5	301	3	8.25	5.1	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000109738	ENSMUSP00000105360	TRANSLATION	protein_coding	-	CCDS22486.1	1	301	3	8.25	5.1	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000130902	ENSMUSP00000116164	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000122931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000137791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000140561	ENSMUSP00000118442	TRANSLATION	protein_coding	stop	-	3	54	2	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000065049	ENSMUSP00000066769	TRANSLATION	protein_coding	-	-	1	254	3	7.25	0	0	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000052926	Rnaseh2a	ENSMUST00000147812	ENSMUSP00000120374	TRANSLATION	protein_coding	-	CCDS22486.1	5	301	3	8.25	5.1	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000049717	Lig4	ENSMUST00000170033	ENSMUSP00000130807	TRANSLATION	protein_coding	-	CCDS22092.1	1	911	10	1	7.5	507.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000049717	Lig4	ENSMUST00000095476	ENSMUSP00000093130	TRANSLATION	protein_coding	-	CCDS22092.1	1	911	10	1	7.5	507.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000031803	B3gnt3	ENSMUST00000034260	ENSMUSP00000034260	TRANSLATION	protein_coding	-	CCDS22405.1	1	372	0	0	0.5	142.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000065954	Tacc1	ENSMUST00000084512	ENSMUSP00000081560	TRANSLATION	protein_coding	-	CCDS40302.1	1	368	0	1.55	3.9	0	0	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000065954	Tacc1	ENSMUST00000210933	ENSMUSP00000147876	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000065954	Tacc1	ENSMUST00000211622	ENSMUSP00000147499	TRANSLATION	nonsense_mediated_decay	-	-	1	360	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000065954	Tacc1	ENSMUST00000210488	ENSMUSP00000147353	TRANSLATION	protein_coding	stop	-	3	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000065954	Tacc1	ENSMUST00000084030	ENSMUSP00000081043	TRANSLATION	protein_coding	-	CCDS40303.1	1	776	0	1.55	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000065954	Tacc1	ENSMUST00000211218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065954	Tacc1	ENSMUST00000209441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065954	Tacc1	ENSMUST00000210645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065954	Tacc1	ENSMUST00000209633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065954	Tacc1	ENSMUST00000210767	ENSMUSP00000147539	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000065954	Tacc1	ENSMUST00000209827	ENSMUSP00000147382	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000065954	Tacc1	ENSMUST00000211584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000065954	Tacc1	ENSMUST00000210016	ENSMUSP00000147525	TRANSLATION	protein_coding	stop	-	5	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010936	Vac14	ENSMUST00000212766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010936	Vac14	ENSMUST00000034190	ENSMUSP00000034190	TRANSLATION	protein_coding	-	CCDS22663.1	1	782	0	0	5.1	399.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000010936	Vac14	ENSMUST00000212663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010936	Vac14	ENSMUST00000213015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010936	Vac14	ENSMUST00000213003	ENSMUSP00000148440	TRANSLATION	nonsense_mediated_decay	-	-	1	142	0	0	0	102.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010936	Vac14	ENSMUST00000212829	ENSMUSP00000148548	TRANSLATION	nonsense_mediated_decay	-	-	5	461	0	0	0	137	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031808	Slc27a1	ENSMUST00000211886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031808	Slc27a1	ENSMUST00000212889	ENSMUSP00000148768	TRANSLATION	protein_coding	-	CCDS40386.1	1	646	23	7.38	8.8	234	0	2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000031808	Slc27a1	ENSMUST00000034267	ENSMUSP00000034267	TRANSLATION	protein_coding	-	CCDS40386.1	1	646	23	7.38	8.8	234	0	2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000031808	Slc27a1	ENSMUST00000211811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031808	Slc27a1	ENSMUST00000212211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031808	Slc27a1	ENSMUST00000212989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031808	Slc27a1	ENSMUST00000212225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031808	Slc27a1	ENSMUST00000213100	ENSMUSP00000148616	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000031808	Slc27a1	ENSMUST00000212111	ENSMUSP00000148305	TRANSLATION	protein_coding	stop	-	2	182	0	1.16	0	71.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000036990	Otud4	ENSMUST00000174485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036990	Otud4	ENSMUST00000173078	ENSMUSP00000133939	TRANSLATION	protein_coding	-	CCDS57625.1	1	1107	0	2.66	1.5	54.8	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000036990	Otud4	ENSMUST00000173868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036990	Otud4	ENSMUST00000172614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036990	Otud4	ENSMUST00000173286	ENSMUSP00000134097	TRANSLATION	protein_coding	-	CCDS57626.1	1	1106	0	2.66	1.5	54.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036990	Otud4	ENSMUST00000173300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074443	Defa22	ENSMUST00000098897	ENSMUSP00000096496	TRANSLATION	protein_coding	-	CCDS40267.1	1	93	0	0	0.5	97.9	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000074437	Defa29	ENSMUST00000098890	ENSMUSP00000096489	TRANSLATION	protein_coding	-	CCDS40271.1	1	116	4	0	0.5	81.5	0	4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000082211	Defa27	ENSMUST00000167683	ENSMUSP00000126797	TRANSLATION	protein_coding	-	-	1	93	0	0	1.5	109.5	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000082211	Defa27	ENSMUST00000168340	ENSMUSP00000131618	TRANSLATION	protein_coding	-	-	5	66	0	0	0	41.2	0	-4,-7	-	-	1.902	MINOR
ENSMUSG00000031557	Plekha2	ENSMUST00000098866	ENSMUSP00000096464	TRANSLATION	protein_coding	stop	-	1	336	0	6.495	0	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031557	Plekha2	ENSMUST00000064883	ENSMUSP00000066546	TRANSLATION	protein_coding	-	CCDS22198.1	1	425	0	6.495	3.9	104.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031557	Plekha2	ENSMUST00000128715	ENSMUSP00000122564	TRANSLATION	protein_coding	-	CCDS22198.1	1	425	0	6.495	3.9	104.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031557	Plekha2	ENSMUST00000211708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031557	Plekha2	ENSMUST00000125466	ENSMUSP00000116764	TRANSLATION	protein_coding	stop	-	5	95	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074440	Defa3	ENSMUST00000098893	ENSMUSP00000096492	TRANSLATION	protein_coding	-	CCDS40270.1	1	93	0	0	1.5	121.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000045969	Ing1	ENSMUST00000210670	ENSMUSP00000148023	TRANSLATION	protein_coding	stop	-	3	77	0	1.204	0	73.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045969	Ing1	ENSMUST00000210041	ENSMUSP00000147270	TRANSLATION	protein_coding	-	CCDS85499.1	5	185	8	1.4	0.5	0	0	-4,-5	-	-	8.19	MINOR
ENSMUSG00000045969	Ing1	ENSMUST00000211007	ENSMUSP00000148030	TRANSLATION	protein_coding	-	CCDS85499.1	1	185	8	1.4	0.5	0	0	-4,-5	-	-	8.19	MINOR
ENSMUSG00000045969	Ing1	ENSMUST00000054399	ENSMUSP00000062593	TRANSLATION	protein_coding	-	CCDS22097.1	1	279	8	3.304	17	106.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000045969	Ing1	ENSMUST00000210740	ENSMUSP00000147476	TRANSLATION	protein_coding	-	CCDS85499.1	1	185	8	1.4	0.5	0	0	-4,-5	-	-	8.19	MINOR
ENSMUSG00000045969	Ing1	ENSMUST00000209565	ENSMUSP00000147892	TRANSLATION	protein_coding	-	CCDS85499.1	1	185	8	1.4	0.5	0	0	-4,-5	-	-	8.19	MINOR
ENSMUSG00000045969	Ing1	ENSMUST00000209646	ENSMUSP00000148248	TRANSLATION	protein_coding	stop	-	3	161	7	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037134	Prmt9	ENSMUST00000056237	ENSMUSP00000050181	TRANSLATION	protein_coding	-	CCDS40394.1	1	846	19	3.88	1.7	0	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000037134	Prmt9	ENSMUST00000156753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037134	Prmt9	ENSMUST00000210040	ENSMUSP00000148193	TRANSLATION	nonsense_mediated_decay	-	-	1	305	17	2.04	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037134	Prmt9	ENSMUST00000142824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037134	Prmt9	ENSMUST00000118622	ENSMUSP00000112692	TRANSLATION	protein_coding	-	-	5	846	19	3.678	1.7	0	0	-4,-1	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212616	ENSMUSP00000148660	TRANSLATION	protein_coding	start	-	5	235	5	6.58	0	174.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212952	ENSMUSP00000148333	TRANSLATION	protein_coding	start/stop	-	5	238	7	6.83	0	103.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046707	Csnk2a2	ENSMUST00000211980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212441	ENSMUSP00000148460	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046707	Csnk2a2	ENSMUST00000056919	ENSMUSP00000055919	TRANSLATION	protein_coding	-	CCDS22562.1	1	350	20	10.33	12.8	239.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212214	ENSMUSP00000148404	TRANSLATION	protein_coding	-	CCDS22562.1	1	350	20	10.33	12.8	239.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212750	ENSMUSP00000148633	TRANSLATION	protein_coding	start	-	1	121	0	3.33	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046707	Csnk2a2	ENSMUST00000212629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031901	Dus2	ENSMUST00000141374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031901	Dus2	ENSMUST00000034375	ENSMUSP00000034375	TRANSLATION	protein_coding	-	CCDS22627.1	1	493	21	11.75	7.5	204.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000031901	Dus2	ENSMUST00000138524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031901	Dus2	ENSMUST00000119736	ENSMUSP00000113781	TRANSLATION	nonsense_mediated_decay	-	-	1	90	5	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031901	Dus2	ENSMUST00000142898	ENSMUSP00000120375	TRANSLATION	protein_coding	stop	-	5	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031901	Dus2	ENSMUST00000144904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000034091	ENSMUSP00000034091	TRANSLATION	protein_coding	-	CCDS22518.1	1	1135	0	7.854	1.5	589	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031666	Rbl2	ENSMUST00000144190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000126689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000211136	ENSMUSP00000147579	TRANSLATION	protein_coding	-	CCDS85581.1	1	1092	0	7.294	0.5	547.2	0	-4,-5	-	-	8.37	MINOR
ENSMUSG00000031666	Rbl2	ENSMUST00000145246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031666	Rbl2	ENSMUST00000130336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000209518	ENSMUSP00000147327	TRANSLATION	protein_coding	-	CCDS85580.1	1	1125	0	7.59	0.5	568.3	0	-4,-5	-	-	10.23	MINOR
ENSMUSG00000031666	Rbl2	ENSMUST00000141351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000147361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031666	Rbl2	ENSMUST00000210533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034390	Cmip	ENSMUST00000211913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034390	Cmip	ENSMUST00000166750	ENSMUSP00000130264	TRANSLATION	protein_coding	-	CCDS52680.1	5	773	0	0	9.8	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000034390	Cmip	ENSMUST00000095172	ENSMUSP00000092795	TRANSLATION	protein_coding	-	CCDS52681.1	1	685	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034390	Cmip	ENSMUST00000212884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115067	Dpep2	ENSMUST00000227363	ENSMUSP00000154250	TRANSLATION	protein_coding	-	CCDS22625.1	-	578	7	6.35	0.5	340.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000115067	Dpep2	ENSMUST00000081998	ENSMUSP00000080659	TRANSLATION	protein_coding,RT	start	-	1	588	7	6.35	0	340.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031907	Zfp90	ENSMUST00000034382	ENSMUSP00000034382	TRANSLATION	protein_coding	-	CCDS22635.1	1	636	52	1.32	1.5	339.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031907	Zfp90	ENSMUST00000212866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031907	Zfp90	ENSMUST00000212606	ENSMUSP00000148457	TRANSLATION	protein_coding	-	-	1	103	0	1	0	91.4	0	-4,-5	-	-	4.548	MINOR
ENSMUSG00000031907	Zfp90	ENSMUST00000213045	ENSMUSP00000148833	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1	0	91	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031907	Zfp90	ENSMUST00000211958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031907	Zfp90	ENSMUST00000212874	ENSMUSP00000148744	TRANSLATION	protein_coding	-	CCDS22635.1	1	636	52	1.32	1.5	339.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000014470	Rnf166	ENSMUST00000136356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014470	Rnf166	ENSMUST00000014614	ENSMUSP00000014614	TRANSLATION	protein_coding	-	CCDS22740.1	1	237	15	4.15	10	96.1	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000014470	Rnf166	ENSMUST00000148780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035964	Tmem59l	ENSMUST00000210365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035964	Tmem59l	ENSMUST00000045286	ENSMUSP00000043659	TRANSLATION	protein_coding	-	CCDS22368.1	1	337	0	0	0.5	217.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031885	Cbfb	ENSMUST00000186070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031885	Cbfb	ENSMUST00000187323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031885	Cbfb	ENSMUST00000109392	ENSMUSP00000105019	TRANSLATION	protein_coding	-	CCDS52654.1	1	182	0	4.83	11.6	283.2	0	-4,-6	-	-	15.158	ALTERNATIVE:1
ENSMUSG00000031885	Cbfb	ENSMUST00000052209	ENSMUSP00000059382	TRANSLATION	protein_coding	-	CCDS22592.1	1	187	0	4.698	14.3	283.7	0	-4,-6	-	-	15.736	PRINCIPAL:3
ENSMUSG00000031885	Cbfb	ENSMUST00000109394	ENSMUSP00000105021	TRANSLATION	protein_coding	-	CCDS52656.1	1	148	0	3.698	2.9	104	0	-4,-6	-	-	4.31	MINOR
ENSMUSG00000031885	Cbfb	ENSMUST00000190915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031885	Cbfb	ENSMUST00000109395	ENSMUSP00000105022	TRANSLATION	protein_coding	-	CCDS52655.1	1	155	0	3.698	0.5	246	0	-4,-6	-	-	7.476	MINOR
ENSMUSG00000109850	Gm45692	ENSMUST00000131138	ENSMUSP00000115452	TRANSLATION	protein_coding,RT	stop	-	5	150	5	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000031792	Usb1	ENSMUST00000145060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031792	Usb1	ENSMUST00000126180	ENSMUSP00000122529	TRANSLATION	protein_coding	stop	-	3	113	0	2.3	0	110.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031792	Usb1	ENSMUST00000213059	ENSMUSP00000148673	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031792	Usb1	ENSMUST00000151223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031792	Usb1	ENSMUST00000034245	ENSMUSP00000034245	TRANSLATION	protein_coding	-	CCDS22560.1	1	267	0	5.05	1.5	222.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033998	Kcnk1	ENSMUST00000046765	ENSMUSP00000046103	TRANSLATION	protein_coding	-	CCDS22783.1	1	336	0	3	11.6	120.1	3	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000033998	Kcnk1	ENSMUST00000212831	ENSMUSP00000148778	TRANSLATION	protein_coding	-	-	5	328	0	3	0.5	120.1	3	-3,-7	-	-	12	MINOR
ENSMUSG00000005698	Ctcf	ENSMUST00000156436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005698	Ctcf	ENSMUST00000128510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005698	Ctcf	ENSMUST00000005841	ENSMUSP00000005841	TRANSLATION	protein_coding	-	CCDS22606.1	1	736	40	6.8	0.5	139.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005698	Ctcf	ENSMUST00000137735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005698	Ctcf	ENSMUST00000132679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005698	Ctcf	ENSMUST00000129388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031592	Pcm1	ENSMUST00000045218	ENSMUSP00000039709	TRANSLATION	protein_coding	-	CCDS22261.1	1	2025	0	0	1.5	929.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000031592	Pcm1	ENSMUST00000210862	ENSMUSP00000148180	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031592	Pcm1	ENSMUST00000211247	ENSMUSP00000147887	TRANSLATION	protein_coding	-	-	5	2064	0	0	1.5	929.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031592	Pcm1	ENSMUST00000211090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091041	Gm17720	ENSMUST00000165700	ENSMUSP00000129865	TRANSLATION	protein_coding	start/stop	-	5	9	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034416	Pkd1l2	ENSMUST00000160449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034416	Pkd1l2	ENSMUST00000098375	ENSMUSP00000095977	TRANSLATION	protein_coding	-	CCDS57646.1	5	2461	0	10.16	0.5	608.6	0	1,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000034416	Pkd1l2	ENSMUST00000109093	ENSMUSP00000104721	TRANSLATION	protein_coding	-	-	5	2462	0	10.16	0.5	608.6	0	1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000034416	Pkd1l2	ENSMUST00000162080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048478	Spata33	ENSMUST00000212523	ENSMUSP00000148358	TRANSLATION	protein_coding	-	-	3	87	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048478	Spata33	ENSMUST00000212892	ENSMUSP00000148396	TRANSLATION	protein_coding	-	-	1	86	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048478	Spata33	ENSMUST00000212760	ENSMUSP00000148766	TRANSLATION	protein_coding	-	-	-	70	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048478	Spata33	ENSMUST00000060133	ENSMUSP00000058002	TRANSLATION	protein_coding	-	CCDS40510.1	1	132	0	0	1.5	131	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000048478	Spata33	ENSMUST00000212161	ENSMUSP00000148452	TRANSLATION	protein_coding	-	-	2	157	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048478	Spata33	ENSMUST00000212271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048478	Spata33	ENSMUST00000212637	ENSMUSP00000148403	TRANSLATION	protein_coding	-	-	2	103	0	0	0.5	131	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048478	Spata33	ENSMUST00000212346	ENSMUSP00000148519	TRANSLATION	protein_coding	-	-	2	115	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031563	Wwc2	ENSMUST00000057561	ENSMUSP00000056121	TRANSLATION	protein_coding	-	CCDS22301.1	1	1187	0	4.8	0.5	39.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031563	Wwc2	ENSMUST00000212282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092329	Galnt2l	ENSMUST00000127664	ENSMUSP00000118564	TRANSLATION	protein_coding,RT	-	-	5	536	23	14	0	179.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000038497	Tmco3	ENSMUST00000211402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038497	Tmco3	ENSMUST00000210600	ENSMUSP00000148167	TRANSLATION	protein_coding	start/stop	-	5	237	0	0.66	0	52.6	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000038497	Tmco3	ENSMUST00000210063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038497	Tmco3	ENSMUST00000211517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038497	Tmco3	ENSMUST00000045229	ENSMUSP00000040347	TRANSLATION	protein_coding	-	CCDS40231.1	1	678	0	3.785	1.7	240.3	10	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038497	Tmco3	ENSMUST00000211645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038497	Tmco3	ENSMUST00000210402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038497	Tmco3	ENSMUST00000210762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038497	Tmco3	ENSMUST00000210750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037415	Ranbp10	ENSMUST00000239468	ENSMUSP00000159340	TRANSLATION	protein_coding	-	-	-	620	0	4.83	6	276.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037415	Ranbp10	ENSMUST00000212856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037415	Ranbp10	ENSMUST00000041400	ENSMUSP00000040045	TRANSLATION	protein_coding	-	CCDS22613.1	1	648	0	4.83	1.5	276.9	0	-2,-5	-	-	12.2	MINOR
ENSMUSG00000031960	Aars	ENSMUST00000154546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031960	Aars	ENSMUST00000034441	ENSMUSP00000034441	TRANSLATION	protein_coding	-	CCDS40478.1	1	968	22	17.14	13	878.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000031960	Aars	ENSMUST00000124285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031960	Aars	ENSMUST00000145059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031960	Aars	ENSMUST00000125268	ENSMUSP00000122388	TRANSLATION	protein_coding	stop	-	3	7	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031960	Aars	ENSMUST00000128320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031960	Aars	ENSMUST00000142770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071078	Nr2c2ap	ENSMUST00000211898	ENSMUSP00000148493	TRANSLATION	protein_coding	-	-	1	54	3	0	0	0	0	-4,-7	-	-	3	ALTERNATIVE:2
ENSMUSG00000071078	Nr2c2ap	ENSMUST00000212851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071078	Nr2c2ap	ENSMUST00000095273	ENSMUSP00000092907	TRANSLATION	protein_coding	-	CCDS40366.1	1	140	3	0	2.7	0	0	-4,-7	-	-	3	PRINCIPAL:2
ENSMUSG00000039079	Trhr2	ENSMUST00000044123	ENSMUSP00000042575	TRANSLATION	protein_coding	-	CCDS22734.1	1	382	0	2	0.5	181.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055707	Klhl26	ENSMUST00000209415	ENSMUSP00000147432	TRANSLATION	protein_coding	-	-	1	91	0	0.9	0	41.2	0	-4,-7	-	-	0.858	MINOR
ENSMUSG00000055707	Klhl26	ENSMUST00000066597	ENSMUSP00000069077	TRANSLATION	protein_coding	-	CCDS40373.1	1	606	0	3.47	1.5	299.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055707	Klhl26	ENSMUST00000209567	ENSMUSP00000147349	TRANSLATION	protein_coding	-	-	3	525	0	2.37	1.7	240.3	0	-4,-2	-	-	6.246	MINOR
ENSMUSG00000055707	Klhl26	ENSMUST00000166976	ENSMUSP00000129607	TRANSLATION	protein_coding	-	CCDS52573.1	2	545	0	2.67	0.5	243.2	0	-4,-2	-	-	7.02	MINOR
ENSMUSG00000055707	Klhl26	ENSMUST00000210250	ENSMUSP00000147385	TRANSLATION	protein_coding	-	-	1	572	0	2.47	0	238.7	0	-4,-7	-	-	6.354	MINOR
ENSMUSG00000031921	Terf2	ENSMUST00000155834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031921	Terf2	ENSMUST00000142616	ENSMUSP00000118589	TRANSLATION	nonsense_mediated_decay	start	-	1	179	0	4.5	0	107.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031921	Terf2	ENSMUST00000116425	ENSMUSP00000112126	TRANSLATION	protein_coding	-	CCDS52666.1	1	470	0	6.7	0.5	187.4	0	-4,-6	-	-	6.324	MINOR
ENSMUSG00000031921	Terf2	ENSMUST00000133925	ENSMUSP00000118759	TRANSLATION	protein_coding	-	CCDS22646.2	1	540	0	8.1	0.5	235.3	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000031921	Terf2	ENSMUST00000136178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031921	Terf2	ENSMUST00000068388	ENSMUSP00000065586	TRANSLATION	protein_coding	-	CCDS72167.1	1	476	0	8.1	0.5	233.4	0	-4,-6	-	-	11.886	ALTERNATIVE:2
ENSMUSG00000031921	Terf2	ENSMUST00000141205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031921	Terf2	ENSMUST00000068421	ENSMUSP00000068948	TRANSLATION	protein_coding	-	-	5	541	0	8.1	0.5	235.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000092260	Zfp963	ENSMUST00000154063	ENSMUSP00000117867	TRANSLATION	protein_coding	-	-	3	99	0	1.15	0	79.3	0	-4,-5	-	-	2.706	MINOR
ENSMUSG00000092260	Zfp963	ENSMUST00000130458	ENSMUSP00000119087	TRANSLATION	protein_coding	-	CCDS52566.1	1	383	28	2.55	1.5	184	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031504	Rab20	ENSMUST00000033900	ENSMUSP00000033900	TRANSLATION	protein_coding	-	CCDS22095.1	1	233	20	1.1	1.5	107.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058568	Defb50	ENSMUST00000078879	ENSMUSP00000077918	TRANSLATION	protein_coding	-	CCDS40283.1	1	73	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000007950	Abhd8	ENSMUST00000212321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007950	Abhd8	ENSMUST00000212503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007950	Abhd8	ENSMUST00000008094	ENSMUSP00000008094	TRANSLATION	protein_coding	-	CCDS40382.1	1	439	9	1.58	1.5	64.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070000	Fcho1	ENSMUST00000141323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070000	Fcho1	ENSMUST00000125092	ENSMUSP00000123554	TRANSLATION	protein_coding	stop	-	2	87	0	2.83	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070000	Fcho1	ENSMUST00000149363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070000	Fcho1	ENSMUST00000093444	ENSMUSP00000091151	TRANSLATION	protein_coding	-	CCDS52588.1	5	873	0	14.205	1.5	248.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070000	Fcho1	ENSMUST00000127005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070000	Fcho1	ENSMUST00000152742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070000	Fcho1	ENSMUST00000126455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070000	Fcho1	ENSMUST00000146100	ENSMUSP00000117606	TRANSLATION	protein_coding	-	-	1	873	0	14.205	1.5	248.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070000	Fcho1	ENSMUST00000153800	ENSMUSP00000116135	TRANSLATION	protein_coding	stop	-	5	203	0	5.58	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070000	Fcho1	ENSMUST00000143699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070000	Fcho1	ENSMUST00000136640	ENSMUSP00000119273	TRANSLATION	nonsense_mediated_decay	-	-	1	304	0	8.14	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070000	Fcho1	ENSMUST00000123425	ENSMUSP00000123631	TRANSLATION	nonsense_mediated_decay	start	-	3	84	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031662	Snx20	ENSMUST00000034087	ENSMUSP00000034087	TRANSLATION	protein_coding	-	CCDS22512.1	1	313	0	0.6	1.5	55.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031662	Snx20	ENSMUST00000209806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031980	Agt	ENSMUST00000063278	ENSMUSP00000066488	TRANSLATION	protein_coding	-	CCDS40513.1	1	482	0	4	0.5	175.5	0	-1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000031980	Agt	ENSMUST00000238882	ENSMUSP00000159140	TRANSLATION	protein_coding	-	-	-	477	0	4	1	175.5	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000031887	Tradd	ENSMUST00000136239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031887	Tradd	ENSMUST00000147670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031887	Tradd	ENSMUST00000144762	ENSMUSP00000119174	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031887	Tradd	ENSMUST00000034359	ENSMUSP00000034359	TRANSLATION	protein_coding	-	CCDS22594.1	1	310	0	2.9	1.5	185.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033931	Rbm34	ENSMUST00000212583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033931	Rbm34	ENSMUST00000045994	ENSMUSP00000048450	TRANSLATION	protein_coding	-	CCDS22787.1	1	442	0	3.515	0.5	87.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033931	Rbm34	ENSMUST00000212618	ENSMUSP00000148473	TRANSLATION	protein_coding	-	-	1	422	0	3.035	0.5	58	0	-4,-5	-	-	9.036	MINOR
ENSMUSG00000040220	Gas8	ENSMUST00000212809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040220	Gas8	ENSMUST00000212923	ENSMUSP00000148576	TRANSLATION	protein_coding	-	-	1	469	0	0	0	264.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000040220	Gas8	ENSMUST00000093043	ENSMUSP00000090730	TRANSLATION	protein_coding	-	CCDS40512.1	1	478	0	0	7.5	264.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000005465	Il27ra	ENSMUST00000210245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005465	Il27ra	ENSMUST00000005601	ENSMUSP00000005601	TRANSLATION	protein_coding	-	CCDS22465.1	1	623	0	3.94	0.5	0	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000005465	Il27ra	ENSMUST00000210790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097084	Foxl1	ENSMUST00000181609	ENSMUSP00000137732	TRANSLATION	protein_coding	-	CCDS59744.1	-	336	0	0.6	0.5	133.1	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000034189	Hsdl1	ENSMUST00000212517	ENSMUSP00000148352	TRANSLATION	protein_coding	-	-	1	309	32	2.66	0.5	123.2	0	-4,-7	-	-	18	MINOR
ENSMUSG00000034189	Hsdl1	ENSMUST00000212198	ENSMUSP00000148675	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034189	Hsdl1	ENSMUST00000036049	ENSMUSP00000044371	TRANSLATION	protein_coding	-	CCDS22708.1	1	330	32	2.66	5.1	123.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000034189	Hsdl1	ENSMUST00000212065	ENSMUSP00000148641	TRANSLATION	protein_coding	stop	-	2	101	10	1.42	0	36.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031807	Pgls	ENSMUST00000123240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031807	Pgls	ENSMUST00000034264	ENSMUSP00000034264	TRANSLATION	protein_coding	-	CCDS22400.1	1	257	8	4.33	5.3	235.4	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031807	Pgls	ENSMUST00000143441	ENSMUSP00000116524	TRANSLATION	protein_coding	-	CCDS80895.1	3	174	6	3.73	0.5	165.3	0	-4,-6	-	-	11.094	MINOR
ENSMUSG00000031807	Pgls	ENSMUST00000138742	ENSMUSP00000120113	TRANSLATION	protein_coding	start	-	3	188	6	2.4	0	148.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031807	Pgls	ENSMUST00000127626	ENSMUSP00000122042	TRANSLATION	nonsense_mediated_decay	-	-	1	215	8	3.73	0	217.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000038506	Dcun1d2	ENSMUST00000045366	ENSMUSP00000047208	TRANSLATION	protein_coding	-	CCDS40228.1	1	259	0	5.48	16.3	173.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000038506	Dcun1d2	ENSMUST00000204673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038506	Dcun1d2	ENSMUST00000110838	ENSMUSP00000106462	TRANSLATION	protein_coding	-	CCDS40230.1	1	197	0	2.82	0.5	45.1	0	-4,-7	-	-	0.678	MINOR
ENSMUSG00000038506	Dcun1d2	ENSMUST00000204840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038506	Dcun1d2	ENSMUST00000203467	ENSMUSP00000145399	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0.32	0	45.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038506	Dcun1d2	ENSMUST00000203604	ENSMUSP00000145430	TRANSLATION	protein_coding	-	-	1	219	0	3.57	0	103.4	0	-4,-7	-	-	3.984	MINOR
ENSMUSG00000038506	Dcun1d2	ENSMUST00000110840	ENSMUSP00000106464	TRANSLATION	protein_coding	-	CCDS40227.1	1	199	0	3.65	0.5	45.1	0	-4,-7	-	-	2.34	MINOR
ENSMUSG00000038506	Dcun1d2	ENSMUST00000110839	ENSMUSP00000106463	TRANSLATION	protein_coding	-	CCDS40229.1	1	207	0	3.834	0.5	104.4	0	-4,-7	-	-	4.572	MINOR
ENSMUSG00000040010	Slc7a5	ENSMUST00000182165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040010	Slc7a5	ENSMUST00000045557	ENSMUSP00000041557	TRANSLATION	protein_coding	-	CCDS22730.1	1	512	0	3.36	1.5	93.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040010	Slc7a5	ENSMUST00000183015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031596	Slc7a2	ENSMUST00000057784	ENSMUSP00000058866	TRANSLATION	protein_coding	-	CCDS22258.1	1	657	0	2.74	6.3	206	15	-4,-1	-	-	14	PRINCIPAL:3
ENSMUSG00000031596	Slc7a2	ENSMUST00000098816	ENSMUSP00000096414	TRANSLATION	protein_coding	-	CCDS40327.1	1	658	0	2.74	6.3	195.3	15	-4,-1	-	-	13.358	ALTERNATIVE:1
ENSMUSG00000031596	Slc7a2	ENSMUST00000117077	ENSMUSP00000113729	TRANSLATION	protein_coding	-	CCDS40327.1	1	658	0	2.74	6.3	195.3	15	-4,-1	-	-	13.358	ALTERNATIVE:1
ENSMUSG00000031596	Slc7a2	ENSMUST00000118432	ENSMUSP00000112848	TRANSLATION	protein_coding	-	-	1	674	0	2.74	0	206	15	-4,0	-	-	12	MINOR
ENSMUSG00000031596	Slc7a2	ENSMUST00000141505	ENSMUSP00000114675	TRANSLATION	protein_coding	stop	-	2	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033313	Fbxl8	ENSMUST00000126923	ENSMUSP00000115366	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	48.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033313	Fbxl8	ENSMUST00000036221	ENSMUSP00000038638	TRANSLATION	protein_coding	-	CCDS22595.1	1	374	0	0	6.3	42.3	0	-4,-5	-	-	7.268	PRINCIPAL:1
ENSMUSG00000031710	Ucp1	ENSMUST00000034146	ENSMUSP00000034146	TRANSLATION	protein_coding	-	CCDS22449.1	1	307	0	5.7	1.5	186.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070713	Gm10282	ENSMUST00000075602	ENSMUSP00000075031	TRANSLATION	protein_coding	-	-	-	90	0	0	15	113.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031843	Mphosph6	ENSMUST00000211818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031843	Mphosph6	ENSMUST00000213070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031843	Mphosph6	ENSMUST00000034303	ENSMUSP00000034303	TRANSLATION	protein_coding	-	CCDS22702.1	1	161	0	0	9.6	140.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031962	Cdh15	ENSMUST00000034443	ENSMUSP00000034443	TRANSLATION	protein_coding	-	CCDS22746.1	1	784	44	10.84	1.5	417.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000048617	Rtbdn	ENSMUST00000121880	ENSMUSP00000113982	TRANSLATION	protein_coding	-	CCDS22485.1	1	247	0	0.9	0.5	127.4	1	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000048617	Rtbdn	ENSMUST00000109740	ENSMUSP00000105362	TRANSLATION	protein_coding	-	CCDS22485.1	1	247	0	0.9	0.5	127.4	1	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000048617	Rtbdn	ENSMUST00000152378	ENSMUSP00000132841	TRANSLATION	protein_coding	-	-	1	216	0	0.9	0	119.7	0	-4,-7	-	-	11.538	ALTERNATIVE:2
ENSMUSG00000048617	Rtbdn	ENSMUST00000067472	ENSMUSP00000070558	TRANSLATION	protein_coding	-	CCDS22485.1	1	247	0	0.9	0.5	127.4	1	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000038365	Fbxo25	ENSMUST00000209290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038365	Fbxo25	ENSMUST00000209310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038365	Fbxo25	ENSMUST00000209913	ENSMUSP00000147467	TRANSLATION	protein_coding	-	CCDS85507.1	1	365	0	0	1.7	0	0	-4,-5	-	-	0.189	ALTERNATIVE:2
ENSMUSG00000038365	Fbxo25	ENSMUST00000210280	ENSMUSP00000147874	TRANSLATION	protein_coding	start	-	3	201	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038365	Fbxo25	ENSMUST00000043520	ENSMUSP00000039544	TRANSLATION	protein_coding	-	CCDS22118.1	1	357	0	0	4.7	0	0	-4,-5	-	-	1	PRINCIPAL:3
ENSMUSG00000014776	Nol3	ENSMUST00000014920	ENSMUSP00000014920	TRANSLATION	protein_coding	-	CCDS52657.1	1	220	0	1	0.5	65.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044600	Smim7	ENSMUST00000167290	ENSMUSP00000127441	TRANSLATION	protein_coding	-	CCDS40390.1	1	75	0	0	15.3	0	1	-2,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000044600	Smim7	ENSMUST00000058733	ENSMUSP00000059943	TRANSLATION	protein_coding	-	-	2	63	0	0	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000044600	Smim7	ENSMUST00000163745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061845	Defa35	ENSMUST00000078121	ENSMUSP00000077259	TRANSLATION	protein_coding	-	CCDS52501.1	1	93	0	0	0.5	112.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000052934	Fbxo31	ENSMUST00000180539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052934	Fbxo31	ENSMUST00000059018	ENSMUSP00000057573	TRANSLATION	protein_coding	-	CCDS52693.1	1	507	0	0	1.5	47.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000052934	Fbxo31	ENSMUST00000212985	ENSMUSP00000148763	TRANSLATION	protein_coding	start/stop	-	5	202	0	0	0	47.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052934	Fbxo31	ENSMUST00000181663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052934	Fbxo31	ENSMUST00000180979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031758	Cdyl2	ENSMUST00000109102	ENSMUSP00000104730	TRANSLATION	protein_coding	-	CCDS40488.1	1	503	18	5.73	2.9	168.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031605	Klhl2	ENSMUST00000209458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031605	Klhl2	ENSMUST00000210166	ENSMUSP00000147262	TRANSLATION	protein_coding	-	-	1	603	0	13.04	0.5	522.9	0	-4,-5	-	-	11.82	MINOR
ENSMUSG00000031605	Klhl2	ENSMUST00000034017	ENSMUSP00000034017	TRANSLATION	protein_coding	-	CCDS85544.1	1	593	0	13.13	6.6	522.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031605	Klhl2	ENSMUST00000209919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031605	Klhl2	ENSMUST00000209544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051648	Kctd19	ENSMUST00000168888	ENSMUSP00000131732	TRANSLATION	nonsense_mediated_decay	-	-	5	137	0	0.64	0	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051648	Kctd19	ENSMUST00000063071	ENSMUSP00000050687	TRANSLATION	protein_coding	-	CCDS40459.1	1	950	0	2.03	0.5	32.3	0	-4,-5	-	-	11.238	MINOR
ENSMUSG00000051648	Kctd19	ENSMUST00000167294	ENSMUSP00000130831	TRANSLATION	protein_coding	-	CCDS80922.1	1	927	0	2.03	7.5	32.3	0	-4,-5	-	-	14.238	PRINCIPAL:1
ENSMUSG00000051648	Kctd19	ENSMUST00000168196	ENSMUSP00000130914	TRANSLATION	protein_coding	start/stop	-	5	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079168	Cd209g	ENSMUST00000207281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079168	Cd209g	ENSMUST00000130372	ENSMUSP00000116397	TRANSLATION	protein_coding	-	CCDS57602.1	1	194	16	3.15	0.5	75.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000012519	Mlkl	ENSMUST00000120432	ENSMUSP00000113718	TRANSLATION	protein_coding	-	CCDS52671.1	1	464	0	8.5	1.5	141.3	0	-4,-5	-	-	11.472	PRINCIPAL:3
ENSMUSG00000012519	Mlkl	ENSMUST00000135710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012519	Mlkl	ENSMUST00000056157	ENSMUSP00000055521	TRANSLATION	protein_coding	-	CCDS80932.1	1	472	0	8.764	0.5	138.2	0	-4,-5	-	-	11.814	ALTERNATIVE:2
ENSMUSG00000012519	Mlkl	ENSMUST00000145862	ENSMUSP00000114701	TRANSLATION	protein_coding	stop	-	5	176	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074302	Gm10663	ENSMUST00000098716	ENSMUSP00000096312	TRANSLATION	protein_coding	start/stop	-	5	22	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000017049	Ccdc70	ENSMUST00000070649	ENSMUSP00000069249	TRANSLATION	protein_coding	-	CCDS22167.1	1	223	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000017049	Ccdc70	ENSMUST00000017193	ENSMUSP00000017193	TRANSLATION	protein_coding	-	CCDS22167.1	1	223	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000019362	D8Ertd738e	ENSMUST00000019506	ENSMUSP00000019506	TRANSLATION	protein_coding	-	CCDS40408.1	2	94	0	0	1.5	76.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038193	Hand2	ENSMUST00000040104	ENSMUSP00000044983	TRANSLATION	protein_coding	-	CCDS22315.1	1	217	0	0.4	11.6	65.9	0	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041203	Trir	ENSMUST00000047281	ENSMUSP00000044129	TRANSLATION	protein_coding	-	CCDS22490.1	1	173	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000031862	Atp13a1	ENSMUST00000034326	ENSMUSP00000034326	TRANSLATION	protein_coding	-	CCDS22349.1	1	1200	6	8.12	2.7	117.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031862	Atp13a1	ENSMUST00000238648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238316	ENSMUSP00000158602	TRANSLATION	nonsense_mediated_decay	start	-	-	69	0	0.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031862	Atp13a1	ENSMUST00000238217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031862	Atp13a1	ENSMUST00000238491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053695	Defb37	ENSMUST00000066282	ENSMUSP00000067193	TRANSLATION	protein_coding	-	CCDS40247.1	1	62	0	0	1.5	46.4	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000031574	Star	ENSMUST00000033979	ENSMUSP00000033979	TRANSLATION	protein_coding	-	CCDS22203.1	1	284	0	5	7.5	182.1	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000031574	Star	ENSMUST00000210565	ENSMUSP00000148087	TRANSLATION	protein_coding	stop	-	5	157	0	2	0	58.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000049008	BB014433	ENSMUST00000123331	ENSMUSP00000116138	TRANSLATION	protein_coding	stop	-	2	116	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049008	BB014433	ENSMUST00000179941	ENSMUSP00000137001	TRANSLATION	protein_coding	-	-	-	389	0	0.16	0	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000049008	BB014433	ENSMUST00000050493	ENSMUSP00000053487	TRANSLATION	protein_coding	-	-	1	389	0	0.16	0	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000003814	Calr	ENSMUST00000154774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003814	Calr	ENSMUST00000125998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003814	Calr	ENSMUST00000128028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003814	Calr	ENSMUST00000003912	ENSMUSP00000003912	TRANSLATION	protein_coding	-	CCDS22479.1	1	416	5	8.6	1.5	287.4	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000042870	Tom1	ENSMUST00000212651	ENSMUSP00000148622	TRANSLATION	protein_coding	stop	-	2	97	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042870	Tom1	ENSMUST00000212564	ENSMUSP00000148584	TRANSLATION	nonsense_mediated_decay	-	-	2	68	0	1.49	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042870	Tom1	ENSMUST00000212299	ENSMUSP00000148670	TRANSLATION	protein_coding	stop	-	3	141	0	3	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042870	Tom1	ENSMUST00000211938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042870	Tom1	ENSMUST00000211869	ENSMUSP00000148629	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042870	Tom1	ENSMUST00000165630	ENSMUSP00000130854	TRANSLATION	protein_coding	-	CCDS52601.1	1	492	0	6.91	7.5	251.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042870	Tom1	ENSMUST00000212278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042870	Tom1	ENSMUST00000078847	ENSMUSP00000077891	TRANSLATION	protein_coding	-	CCDS52600.1	1	516	0	6.91	0.5	251.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000042870	Tom1	ENSMUST00000212388	ENSMUSP00000148271	TRANSLATION	protein_coding	stop	-	3	96	0	2.146	0	93.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038069	Cdkn2aip	ENSMUST00000038738	ENSMUSP00000043713	TRANSLATION	protein_coding	-	-	1	119	0	0	1.5	113	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038069	Cdkn2aip	ENSMUST00000212175	ENSMUSP00000148441	TRANSLATION	protein_coding	-	CCDS22299.1	1	563	0	0	0.5	113	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038069	Cdkn2aip	ENSMUST00000212658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056608	Chd9	ENSMUST00000211403	ENSMUSP00000147839	TRANSLATION	protein_coding	stop	-	1	641	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056608	Chd9	ENSMUST00000209746	ENSMUSP00000147296	TRANSLATION	protein_coding	stop	-	5	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056608	Chd9	ENSMUST00000210887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056608	Chd9	ENSMUST00000211552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056608	Chd9	ENSMUST00000211795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056608	Chd9	ENSMUST00000209203	ENSMUSP00000147407	TRANSLATION	nonsense_mediated_decay	-	-	1	1853	7	10.57	0	359.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056608	Chd9	ENSMUST00000211215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056608	Chd9	ENSMUST00000209341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056608	Chd9	ENSMUST00000109614	ENSMUSP00000105243	TRANSLATION	protein_coding	-	CCDS80912.1	5	2885	7	13.57	0.5	461.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000056608	Chd9	ENSMUST00000209474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056608	Chd9	ENSMUST00000210947	ENSMUSP00000147741	TRANSLATION	protein_coding	stop	-	1	874	7	9.89	0	359.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056608	Chd9	ENSMUST00000209531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056608	Chd9	ENSMUST00000048665	ENSMUSP00000046356	TRANSLATION	protein_coding	-	CCDS22517.1	1	2869	7	13.57	0.5	461.3	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000056608	Chd9	ENSMUST00000211034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056608	Chd9	ENSMUST00000209423	ENSMUSP00000148088	TRANSLATION	protein_coding	-	CCDS80912.1	1	2885	7	13.57	0.5	461.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000001910	Nacc1	ENSMUST00000001975	ENSMUSP00000001975	TRANSLATION	protein_coding	-	CCDS22475.1	1	514	0	2.3	1.5	125.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001910	Nacc1	ENSMUST00000238449	ENSMUSP00000158624	TRANSLATION	protein_coding	stop	-	-	187	0	2.3	0	88.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001910	Nacc1	ENSMUST00000238434	ENSMUSP00000158606	TRANSLATION	protein_coding	start/stop	-	-	372	0	0.8	0	36.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001910	Nacc1	ENSMUST00000238687	ENSMUSP00000158582	TRANSLATION	protein_coding	stop	-	-	64	0	1	0	55.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001910	Nacc1	ENSMUST00000238301	ENSMUSP00000158781	TRANSLATION	protein_coding	stop	-	-	223	0	2.3	0	88.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053399	Adamts18	ENSMUST00000212437	ENSMUSP00000148288	TRANSLATION	nonsense_mediated_decay	start	-	1	148	0	0	0	65.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053399	Adamts18	ENSMUST00000213076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053399	Adamts18	ENSMUST00000213061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053399	Adamts18	ENSMUST00000213078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053399	Adamts18	ENSMUST00000093113	ENSMUSP00000090801	TRANSLATION	protein_coding	-	CCDS40485.1	1	1219	17	8.57	1.5	530.1	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000053399	Adamts18	ENSMUST00000212527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053399	Adamts18	ENSMUST00000212665	ENSMUSP00000148330	TRANSLATION	nonsense_mediated_decay	start	-	1	117	0	0	0	36.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048400	Prss54	ENSMUST00000180075	ENSMUSP00000137577	TRANSLATION	protein_coding	-	-	5	383	0	2.02	1.5	90.9	0	2,-2	-	-	11.946	ALTERNATIVE:2
ENSMUSG00000048400	Prss54	ENSMUST00000213096	ENSMUSP00000148608	TRANSLATION	protein_coding	-	-	5	383	0	2.02	1.5	90.9	0	2,-2	-	-	11.946	ALTERNATIVE:2
ENSMUSG00000048400	Prss54	ENSMUST00000212513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048400	Prss54	ENSMUST00000052690	ENSMUSP00000058859	TRANSLATION	protein_coding	-	CCDS80916.1	1	383	0	2.02	1.5	91.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000048400	Prss54	ENSMUST00000212368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031703	Itfg1	ENSMUST00000210572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031703	Itfg1	ENSMUST00000034140	ENSMUSP00000034140	TRANSLATION	protein_coding	-	CCDS40424.1	1	610	21	0	1.5	0	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000031703	Itfg1	ENSMUST00000210604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031703	Itfg1	ENSMUST00000210133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057074	Ces1g	ENSMUST00000044602	ENSMUSP00000037555	TRANSLATION	protein_coding	-	CCDS22531.1	1	565	6	12.2	0.5	535.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000059897	Zfp930	ENSMUST00000212020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059897	Zfp930	ENSMUST00000212681	ENSMUSP00000148587	TRANSLATION	protein_coding	-	CCDS85546.1	2	441	51	2.3	0.5	378.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059897	Zfp930	ENSMUST00000212312	ENSMUSP00000148604	TRANSLATION	protein_coding	-	-	2	92	0	1	0	73.8	0	-4,-5	-	-	2.61	MINOR
ENSMUSG00000059897	Zfp930	ENSMUST00000110216	ENSMUSP00000105845	TRANSLATION	protein_coding	start	-	5	440	51	2.3	0.5	378.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031610	Scrg1	ENSMUST00000034023	ENSMUSP00000034023	TRANSLATION	protein_coding	-	CCDS40342.1	1	98	0	0	5.1	156.7	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000031841	Cdh13	ENSMUST00000148836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031841	Cdh13	ENSMUST00000123567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031841	Cdh13	ENSMUST00000145849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031841	Cdh13	ENSMUST00000142551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031841	Cdh13	ENSMUST00000129548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031841	Cdh13	ENSMUST00000212476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031841	Cdh13	ENSMUST00000117160	ENSMUSP00000113527	TRANSLATION	protein_coding	-	CCDS52682.1	1	714	47	11.12	2.9	372	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031841	Cdh13	ENSMUST00000151842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006276	Eps15l1	ENSMUST00000212590	ENSMUSP00000148484	TRANSLATION	protein_coding	-	CCDS85560.1	1	599	10	9.76	1.7	0	0	-4,-5	-	-	12.264	MINOR
ENSMUSG00000006276	Eps15l1	ENSMUST00000211977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006276	Eps15l1	ENSMUST00000212950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006276	Eps15l1	ENSMUST00000212121	ENSMUSP00000148468	TRANSLATION	protein_coding	-	CCDS85561.1	1	763	10	9.76	1.5	0	0	-4,-5	-	-	12.188	MINOR
ENSMUSG00000006276	Eps15l1	ENSMUST00000163643	ENSMUSP00000129739	TRANSLATION	protein_coding	-	CCDS52597.1	1	907	10	9.76	6.3	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000006276	Eps15l1	ENSMUST00000212257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031461	Myom2	ENSMUST00000140033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031461	Myom2	ENSMUST00000131251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031461	Myom2	ENSMUST00000033842	ENSMUSP00000033842	TRANSLATION	protein_coding	-	CCDS22123.1	1	1463	0	23.6	1.5	430	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031461	Myom2	ENSMUST00000135393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031461	Myom2	ENSMUST00000135908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048371	Pdp2	ENSMUST00000059588	ENSMUSP00000092821	TRANSLATION	protein_coding	-	CCDS22582.1	1	532	9	1	1.5	119.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000052819	Best2	ENSMUST00000059072	ENSMUSP00000053408	TRANSLATION	protein_coding	-	CCDS52621.1	1	508	0	7.5	5.1	374.2	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000052819	Best2	ENSMUST00000209421	ENSMUSP00000147837	TRANSLATION	protein_coding	-	CCDS52621.1	1	508	0	7.5	5.1	374.2	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000052819	Best2	ENSMUST00000209322	ENSMUSP00000147580	TRANSLATION	protein_coding	-	CCDS52621.1	1	508	0	7.5	5.1	374.2	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000036672	Cenpt	ENSMUST00000212873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036672	Cenpt	ENSMUST00000212204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036672	Cenpt	ENSMUST00000212839	ENSMUSP00000148294	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	53.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036672	Cenpt	ENSMUST00000212803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036672	Cenpt	ENSMUST00000040776	ENSMUSP00000038188	TRANSLATION	protein_coding	-	CCDS22615.1	1	515	0	2.4	0.5	680.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036672	Cenpt	ENSMUST00000212552	ENSMUSP00000148727	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	53.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036672	Cenpt	ENSMUST00000212357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036672	Cenpt	ENSMUST00000212797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036672	Cenpt	ENSMUST00000212625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036672	Cenpt	ENSMUST00000212431	ENSMUSP00000148612	TRANSLATION	nonsense_mediated_decay	-	-	2	42	0	0	0	53.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058301	Upf1	ENSMUST00000075666	ENSMUSP00000075089	TRANSLATION	protein_coding	-	CCDS52572.1	1	1124	25	16.985	1.5	551.8	0	-4,-5	-	-	17.67	PRINCIPAL:2
ENSMUSG00000058301	Upf1	ENSMUST00000215817	ENSMUSP00000148927	TRANSLATION	protein_coding	-	-	1	1113	25	17.15	1.5	551.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031494	Cd209a	ENSMUST00000012847	ENSMUSP00000012847	TRANSLATION	protein_coding	-	CCDS22073.1	1	238	11	3.65	1.5	82	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000031494	Cd209a	ENSMUST00000208960	ENSMUSP00000146627	TRANSLATION	protein_coding	-	-	5	179	11	3.65	0	82	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031494	Cd209a	ENSMUST00000207906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031494	Cd209a	ENSMUST00000207979	ENSMUSP00000146702	TRANSLATION	protein_coding	-	-	1	211	11	3.2	0	82	0	-4,-6	-	-	17.1	ALTERNATIVE:2
ENSMUSG00000031778	Cx3cl1	ENSMUST00000151783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031778	Cx3cl1	ENSMUST00000150307	ENSMUSP00000123538	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000031778	Cx3cl1	ENSMUST00000135970	ENSMUSP00000117632	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031778	Cx3cl1	ENSMUST00000211956	ENSMUSP00000148819	TRANSLATION	protein_coding	-	-	2	64	0	1	0	0	0	2,-2	-	-	3.426	MINOR
ENSMUSG00000031778	Cx3cl1	ENSMUST00000211947	ENSMUSP00000148534	TRANSLATION	protein_coding	-	-	5	45	0	0	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000031778	Cx3cl1	ENSMUST00000034230	ENSMUSP00000034230	TRANSLATION	protein_coding	-	CCDS22548.1	1	395	0	1.75	1.5	47.2	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031490	Eif4ebp1	ENSMUST00000210959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031490	Eif4ebp1	ENSMUST00000033880	ENSMUSP00000033880	TRANSLATION	protein_coding	-	CCDS22214.1	1	117	0	2	7.5	152.4	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000039633	Lonrf1	ENSMUST00000065297	ENSMUSP00000066403	TRANSLATION	protein_coding	-	CCDS40321.1	5	837	16	3.12	0.5	151.5	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000039633	Lonrf1	ENSMUST00000239119	ENSMUSP00000158932	TRANSLATION	protein_coding	-	-	-	762	16	3.12	1	151.5	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000093904	Tomm20	ENSMUST00000179857	ENSMUSP00000136493	TRANSLATION	protein_coding	-	CCDS22786.1	1	145	0	2.75	21.5	158.6	1	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000093904	Tomm20	ENSMUST00000212771	ENSMUSP00000148566	TRANSLATION	protein_coding	-	-	2	102	0	1.5	0	53.8	1	-4,-7	-	-	3.27	MINOR
ENSMUSG00000039478	Micu3	ENSMUST00000136835	ENSMUSP00000118883	TRANSLATION	protein_coding	start	-	5	262	9	3.67	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039478	Micu3	ENSMUST00000132481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039478	Micu3	ENSMUST00000068999	ENSMUSP00000070241	TRANSLATION	protein_coding	-	CCDS52545.1	5	523	9	4.916	1.5	54.8	0	-4,0	-	-	17.85	PRINCIPAL:1
ENSMUSG00000031728	Zfp821	ENSMUST00000212233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031728	Zfp821	ENSMUST00000211918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031728	Zfp821	ENSMUST00000212192	ENSMUSP00000148292	TRANSLATION	protein_coding	stop	-	1	404	7	1.598	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031728	Zfp821	ENSMUST00000034163	ENSMUSP00000034163	TRANSLATION	protein_coding	-	CCDS40473.1	1	413	7	1.598	6.5	0	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031728	Zfp821	ENSMUST00000212000	ENSMUSP00000148348	TRANSLATION	protein_coding	-	CCDS40473.1	1	413	7	1.598	6.5	0	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000031728	Zfp821	ENSMUST00000212964	ENSMUSP00000148334	TRANSLATION	protein_coding	-	CCDS85609.1	1	262	6	1.2	4.1	0	0	-4,-1	-	-	10.776	MINOR
ENSMUSG00000037296	Lsm1	ENSMUST00000211168	ENSMUSP00000147832	TRANSLATION	protein_coding	-	-	3	21	0	0.3	0	0	0	-4,-5	-	-	0.72	MINOR
ENSMUSG00000037296	Lsm1	ENSMUST00000210647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037296	Lsm1	ENSMUST00000211670	ENSMUSP00000147348	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	1.05	0	24.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037296	Lsm1	ENSMUST00000038421	ENSMUSP00000041022	TRANSLATION	protein_coding	-	CCDS22202.1	1	133	5	2.5	19.5	56.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056228	Cars2	ENSMUST00000211172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056228	Cars2	ENSMUST00000211395	ENSMUSP00000148016	TRANSLATION	protein_coding	start	-	5	128	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056228	Cars2	ENSMUST00000211734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056228	Cars2	ENSMUST00000209218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056228	Cars2	ENSMUST00000211406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056228	Cars2	ENSMUST00000209676	ENSMUSP00000147495	TRANSLATION	nonsense_mediated_decay	-	-	3	135	6	1.9	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000056228	Cars2	ENSMUST00000211161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056228	Cars2	ENSMUST00000210478	ENSMUSP00000148102	TRANSLATION	nonsense_mediated_decay	-	-	1	226	6	3.86	0	25.1	0	-3,1	-	-	-1	MINOR
ENSMUSG00000056228	Cars2	ENSMUST00000210845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056228	Cars2	ENSMUST00000209236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056228	Cars2	ENSMUST00000049461	ENSMUSP00000046453	TRANSLATION	protein_coding	-	CCDS52478.1	1	552	15	8.26	1.5	44	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000056228	Cars2	ENSMUST00000210599	ENSMUSP00000147421	TRANSLATION	nonsense_mediated_decay	-	-	1	270	8	4.86	0	24.9	0	-3,1	-	-	-1	MINOR
ENSMUSG00000090206	Tepp	ENSMUST00000212056	ENSMUSP00000148526	TRANSLATION	protein_coding	-	-	5	147	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000090206	Tepp	ENSMUST00000162555	ENSMUSP00000125481	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090206	Tepp	ENSMUST00000098480	ENSMUSP00000096080	TRANSLATION	protein_coding	-	CCDS22558.1	1	104	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000090206	Tepp	ENSMUST00000135142	ENSMUSP00000118840	TRANSLATION	protein_coding	stop	-	3	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090206	Tepp	ENSMUST00000162294	ENSMUSP00000124913	TRANSLATION	protein_coding	start	-	2	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090206	Tepp	ENSMUST00000153991	ENSMUSP00000148558	TRANSLATION	protein_coding	start	-	3	82	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000090206	Tepp	ENSMUST00000161029	ENSMUSP00000125362	TRANSLATION	protein_coding	-	CCDS22557.1	1	216	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:4
ENSMUSG00000045538	Ddx28	ENSMUST00000058579	ENSMUSP00000058950	TRANSLATION	protein_coding	-	CCDS22626.1	-	540	13	0.48	2.7	216.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031840	Rab3a	ENSMUST00000110093	ENSMUSP00000105720	TRANSLATION	protein_coding	-	CCDS22379.1	1	220	18	4.25	17.5	205.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031840	Rab3a	ENSMUST00000143118	ENSMUSP00000123384	TRANSLATION	protein_coding	stop	-	3	62	4	1.75	0	65.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031840	Rab3a	ENSMUST00000110092	ENSMUSP00000105719	TRANSLATION	protein_coding	-	CCDS22379.1	1	220	18	4.25	17.5	205.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031840	Rab3a	ENSMUST00000110090	ENSMUSP00000105717	TRANSLATION	protein_coding	-	CCDS22379.1	3	220	18	4.25	17.5	205.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031840	Rab3a	ENSMUST00000034301	ENSMUSP00000034301	TRANSLATION	protein_coding	-	CCDS22379.1	1	220	18	4.25	17.5	205.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031840	Rab3a	ENSMUST00000130468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039720	Got1l1	ENSMUST00000038174	ENSMUSP00000041337	TRANSLATION	protein_coding	-	CCDS22212.1	1	404	13	7.744	1.5	70.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000039720	Got1l1	ENSMUST00000211002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039720	Got1l1	ENSMUST00000209699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039720	Got1l1	ENSMUST00000209281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039720	Got1l1	ENSMUST00000209299	ENSMUSP00000147871	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031987	Egln1	ENSMUST00000034469	ENSMUSP00000034469	TRANSLATION	protein_coding	-	CCDS52706.1	1	400	3	4.25	0.5	115	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035824	Tk2	ENSMUST00000050211	ENSMUSP00000053616	TRANSLATION	protein_coding	-	CCDS22573.1	1	270	16	5.844	1.5	218.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035824	Tk2	ENSMUST00000211995	ENSMUSP00000148384	TRANSLATION	nonsense_mediated_decay	-	-	1	136	8	2.25	0	81.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000035824	Tk2	ENSMUST00000212279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035824	Tk2	ENSMUST00000212275	ENSMUSP00000148642	TRANSLATION	protein_coding	-	CCDS22573.1	2	270	16	5.844	1.5	218.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035824	Tk2	ENSMUST00000212165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035824	Tk2	ENSMUST00000212805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035824	Tk2	ENSMUST00000212209	ENSMUSP00000148733	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000035824	Tk2	ENSMUST00000212854	ENSMUSP00000148375	TRANSLATION	nonsense_mediated_decay	start	-	3	64	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000036306	Lzts1	ENSMUST00000037049	ENSMUSP00000039397	TRANSLATION	protein_coding	-	CCDS22345.1	1	599	0	0	1.5	213.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000036306	Lzts1	ENSMUST00000184961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036306	Lzts1	ENSMUST00000181890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036306	Lzts1	ENSMUST00000185176	ENSMUSP00000139117	TRANSLATION	protein_coding	-	CCDS22345.1	5	599	0	0	1.5	213.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000036306	Lzts1	ENSMUST00000209353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094818	Defa32	ENSMUST00000084041	ENSMUSP00000081054	TRANSLATION	protein_coding	-	CCDS52509.1	1	95	0	1	0.5	81.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000053226	Dand5	ENSMUST00000238279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053226	Dand5	ENSMUST00000065539	ENSMUSP00000070057	TRANSLATION	protein_coding	-	CCDS22477.1	1	185	0	0.64	1.5	75.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000060212	Pcnx2	ENSMUST00000189197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060212	Pcnx2	ENSMUST00000131127	ENSMUSP00000119965	TRANSLATION	protein_coding	-	-	5	1121	0	0	0	0	7	-2,-5	-	-	0	MINOR
ENSMUSG00000060212	Pcnx2	ENSMUST00000119305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060212	Pcnx2	ENSMUST00000120589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060212	Pcnx2	ENSMUST00000047239	ENSMUSP00000042294	TRANSLATION	protein_coding	-	CCDS52708.1	5	2122	0	0	0.5	371.5	8	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060212	Pcnx2	ENSMUST00000187772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036779	Tent4b	ENSMUST00000154115	ENSMUSP00000120503	TRANSLATION	protein_coding	start	-	3	200	0	0.68	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036779	Tent4b	ENSMUST00000118952	ENSMUSP00000112608	TRANSLATION	protein_coding	-	CCDS52629.1	1	680	15	5.38	1.5	110.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036779	Tent4b	ENSMUST00000066748	ENSMUSP00000067971	TRANSLATION	protein_coding	-	CCDS52630.1	1	637	11	4.38	0.5	109.8	0	-4,-6	-	-	13.278	MINOR
ENSMUSG00000036779	Tent4b	ENSMUST00000125043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036779	Tent4b	ENSMUST00000119033	ENSMUSP00000112766	TRANSLATION	protein_coding	-	CCDS52629.1	1	680	15	5.38	1.5	110.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035057	Mgat4d	ENSMUST00000038692	ENSMUSP00000041629	TRANSLATION	protein_coding	-	CCDS22451.1	1	373	0	0	0.5	388.7	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000035057	Mgat4d	ENSMUST00000139692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054764	Mtnr1a	ENSMUST00000209488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054764	Mtnr1a	ENSMUST00000130141	ENSMUSP00000115764	TRANSLATION	protein_coding	start/stop	-	1	92	0	0	0	35.3	1	0,-4	-	-	-1	MINOR
ENSMUSG00000054764	Mtnr1a	ENSMUST00000067984	ENSMUSP00000069872	TRANSLATION	protein_coding	-	CCDS22273.1	1	353	0	2.41	2.7	169.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005142	Man2b1	ENSMUST00000211223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005142	Man2b1	ENSMUST00000210991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005142	Man2b1	ENSMUST00000211379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005142	Man2b1	ENSMUST00000209361	ENSMUSP00000147350	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0.3	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000005142	Man2b1	ENSMUST00000034121	ENSMUSP00000034121	TRANSLATION	protein_coding	-	CCDS22494.1	1	1013	5	22.11	0.5	727.7	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000005142	Man2b1	ENSMUST00000209264	ENSMUSP00000147441	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069895	Atxn1l	ENSMUST00000212726	ENSMUSP00000148453	TRANSLATION	protein_coding	stop	-	2	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069895	Atxn1l	ENSMUST00000212894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069895	Atxn1l	ENSMUST00000212605	ENSMUSP00000148324	TRANSLATION	protein_coding	-	CCDS40474.1	1	687	0	0.2	6.5	143.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000069895	Atxn1l	ENSMUST00000093162	ENSMUSP00000090850	TRANSLATION	protein_coding	-	CCDS40474.1	2	687	0	0.2	6.5	143.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031799	Tpm4	ENSMUST00000123177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031799	Tpm4	ENSMUST00000238492	ENSMUSP00000158818	TRANSLATION	protein_coding	-	-	-	158	0	4.75	4.4	216	0	-4,-5	-	-	5.042	MINOR
ENSMUSG00000031799	Tpm4	ENSMUST00000003575	ENSMUSP00000003575	TRANSLATION	protein_coding	-	CCDS22408.1	1	248	0	5.95	17.5	305.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031799	Tpm4	ENSMUST00000238752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014791	Elmo3	ENSMUST00000212655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014791	Elmo3	ENSMUST00000109375	ENSMUSP00000105000	TRANSLATION	protein_coding	-	CCDS22598.1	1	720	0	4.2	6.4	442.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000014791	Elmo3	ENSMUST00000212345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014791	Elmo3	ENSMUST00000212046	ENSMUSP00000148595	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014791	Elmo3	ENSMUST00000212033	ENSMUSP00000148820	TRANSLATION	protein_coding	-	-	5	703	0	4.2	0.5	442.6	0	-4,-6	-	-	12	MINOR
ENSMUSG00000031554	Adam5	ENSMUST00000130939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031554	Adam5	ENSMUST00000050300	ENSMUSP00000052661	TRANSLATION	protein_coding	-	CCDS72107.1	1	771	11	6.38	0.5	417.3	1	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000031554	Adam5	ENSMUST00000209935	ENSMUSP00000147290	TRANSLATION	protein_coding	-	CCDS85515.1	1	699	11	6.38	0.5	417.3	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000031554	Adam5	ENSMUST00000132180	ENSMUSP00000121272	TRANSLATION	protein_coding	start	-	1	613	11	6.38	0	389.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031554	Adam5	ENSMUST00000118419	ENSMUSP00000112422	TRANSLATION	protein_coding	-	CCDS52525.1	1	751	11	6.38	0.5	417.3	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000031967	Afg3l1	ENSMUST00000146795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031967	Afg3l1	ENSMUST00000098320	ENSMUSP00000095924	TRANSLATION	nonsense_mediated_decay	-	-	1	584	14	5.6	0	175.9	2	-1,2	-	-	-1	MINOR
ENSMUSG00000031967	Afg3l1	ENSMUST00000133606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031967	Afg3l1	ENSMUST00000152469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031967	Afg3l1	ENSMUST00000150872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031967	Afg3l1	ENSMUST00000001520	ENSMUSP00000001520	TRANSLATION	protein_coding	-	CCDS22760.1	1	789	17	9.51	1.5	427.4	2	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000031639	Tlr3	ENSMUST00000210996	ENSMUSP00000148263	TRANSLATION	protein_coding	stop	-	2	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031639	Tlr3	ENSMUST00000211370	ENSMUSP00000148127	TRANSLATION	protein_coding	stop	-	2	93	0	1	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000031639	Tlr3	ENSMUST00000209651	ENSMUSP00000147961	TRANSLATION	protein_coding	stop	-	5	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031639	Tlr3	ENSMUST00000209772	ENSMUSP00000147738	TRANSLATION	protein_coding	-	CCDS22278.1	1	905	4	5.6	1.5	273.9	1	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000031639	Tlr3	ENSMUST00000210013	ENSMUSP00000147783	TRANSLATION	protein_coding	start	-	-	306	0	1	0	74	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000031639	Tlr3	ENSMUST00000210354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031639	Tlr3	ENSMUST00000209269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031639	Tlr3	ENSMUST00000034056	ENSMUSP00000034056	TRANSLATION	protein_coding	-	CCDS22278.1	1	905	4	5.6	1.5	273.9	1	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000031639	Tlr3	ENSMUST00000167106	ENSMUSP00000126556	TRANSLATION	protein_coding	-	CCDS22278.1	1	905	4	5.6	1.5	273.9	1	0,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000031546	Gins4	ENSMUST00000033950	ENSMUSP00000033950	TRANSLATION	protein_coding	-	CCDS22190.1	1	223	0	6.75	9.8	93.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000008129	4930432K21Rik	ENSMUST00000143833	ENSMUSP00000114433	TRANSLATION	protein_coding	stop	-	5	106	0	0	0	133.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000008129	4930432K21Rik	ENSMUST00000093375	ENSMUSP00000091067	TRANSLATION	protein_coding	-	CCDS52617.1	1	565	0	0	0.5	510.3	0	-4,-2	-	-	0	MINOR
ENSMUSG00000008129	4930432K21Rik	ENSMUST00000118856	ENSMUSP00000113651	TRANSLATION	protein_coding	-	CCDS52616.1	1	600	0	0	0.5	624.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000044433	Camsap3	ENSMUST00000207930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044433	Camsap3	ENSMUST00000207712	ENSMUSP00000146565	TRANSLATION	protein_coding	-	-	1	837	0	2	0	288.7	0	-4,-7	-	-	6.924	MINOR
ENSMUSG00000044433	Camsap3	ENSMUST00000208036	ENSMUSP00000147231	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044433	Camsap3	ENSMUST00000207152	ENSMUSP00000147126	TRANSLATION	nonsense_mediated_decay	start	-	1	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044433	Camsap3	ENSMUST00000171962	ENSMUSP00000125993	TRANSLATION	protein_coding	-	CCDS52469.1	1	1253	0	2	1.5	373.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044433	Camsap3	ENSMUST00000208064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044433	Camsap3	ENSMUST00000207432	ENSMUSP00000146896	TRANSLATION	protein_coding	-	CCDS85488.1	1	1279	0	2	0.5	373.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044433	Camsap3	ENSMUST00000207970	ENSMUSP00000146772	TRANSLATION	protein_coding	-	CCDS85489.1	1	1263	0	2	1.5	373.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044433	Camsap3	ENSMUST00000208240	ENSMUSP00000146359	TRANSLATION	protein_coding	-	-	1	848	0	2	0	288.7	0	-4,-7	-	-	6.924	MINOR
ENSMUSG00000044433	Camsap3	ENSMUST00000207533	ENSMUSP00000147209	TRANSLATION	protein_coding	-	-	1	852	0	2	0	288.7	0	-4,-7	-	-	6.924	MINOR
ENSMUSG00000044433	Camsap3	ENSMUST00000207077	ENSMUSP00000146852	TRANSLATION	protein_coding	-	CCDS85490.1	1	1268	0	2	0.5	373.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044433	Camsap3	ENSMUST00000057028	ENSMUSP00000058958	TRANSLATION	protein_coding	-	CCDS22064.1	1	1252	0	2	0.5	373.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000035671	Zswim4	ENSMUST00000039480	ENSMUSP00000040078	TRANSLATION	protein_coding	-	CCDS22471.1	1	1101	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000038508	Gdf15	ENSMUST00000110103	ENSMUSP00000105730	TRANSLATION	protein_coding	-	CCDS22376.1	1	303	0	0.4	1.5	75.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038508	Gdf15	ENSMUST00000003808	ENSMUSP00000003808	TRANSLATION	protein_coding	-	CCDS22376.1	1	303	0	0.4	1.5	75.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050079	Rspry1	ENSMUST00000121101	ENSMUSP00000112482	TRANSLATION	protein_coding	-	-	1	117	0	0	1.2	0	0	1,-4	-	-	0.093	MINOR
ENSMUSG00000050079	Rspry1	ENSMUST00000211983	ENSMUSP00000148737	TRANSLATION	protein_coding	-	CCDS22544.1	1	576	8	4.36	7.5	102.9	0	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000050079	Rspry1	ENSMUST00000212014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050079	Rspry1	ENSMUST00000211941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050079	Rspry1	ENSMUST00000060389	ENSMUSP00000057275	TRANSLATION	protein_coding	-	CCDS22544.1	1	576	8	4.36	7.5	102.9	0	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000050079	Rspry1	ENSMUST00000212729	ENSMUSP00000148724	TRANSLATION	protein_coding	-	-	1	452	8	4.36	1.2	102.9	0	-4,-5	-	-	18.093	MINOR
ENSMUSG00000050079	Rspry1	ENSMUST00000154035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031651	Triml1	ENSMUST00000211541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031651	Triml1	ENSMUST00000211446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031651	Triml1	ENSMUST00000059692	ENSMUSP00000050267	TRANSLATION	protein_coding	-	CCDS22266.1	1	470	8	2.824	1.5	167.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037251	Pomk	ENSMUST00000061850	ENSMUSP00000053802	TRANSLATION	protein_coding	-	CCDS22204.1	1	349	0	2	3.9	37.6	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000031845	Bco1	ENSMUST00000034308	ENSMUSP00000034308	TRANSLATION	protein_coding	-	CCDS22697.1	1	566	4	8.47	1.5	370.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031845	Bco1	ENSMUST00000176860	ENSMUSP00000134815	TRANSLATION	protein_coding	-	CCDS52679.1	1	526	3	7.87	0.5	315.8	0	-4,-5	-	-	10.542	MINOR
ENSMUSG00000031845	Bco1	ENSMUST00000167370	ENSMUSP00000132042	TRANSLATION	protein_coding	-	CCDS52679.1	5	526	3	7.87	0.5	315.8	0	-4,-5	-	-	10.542	MINOR
ENSMUSG00000031618	Nr3c2	ENSMUST00000126697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031618	Nr3c2	ENSMUST00000109911	ENSMUSP00000105537	TRANSLATION	protein_coding	-	-	5	867	23	6.25	0	177.8	0	-4,-5	-	-	10.62	MINOR
ENSMUSG00000031618	Nr3c2	ENSMUST00000034031	ENSMUSP00000034031	TRANSLATION	protein_coding	-	-	5	984	29	7.25	1.7	190.9	0	-4,-5	-	-	17.406	ALTERNATIVE:2
ENSMUSG00000031618	Nr3c2	ENSMUST00000128862	ENSMUSP00000116008	TRANSLATION	protein_coding	stop	-	2	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031618	Nr3c2	ENSMUST00000148106	ENSMUSP00000118222	TRANSLATION	nonsense_mediated_decay	-	-	5	698	8	2	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031618	Nr3c2	ENSMUST00000143284	ENSMUSP00000122959	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031618	Nr3c2	ENSMUST00000109912	ENSMUSP00000105538	TRANSLATION	protein_coding	-	CCDS40393.1	1	980	29	7.25	2.7	200.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000031618	Nr3c2	ENSMUST00000109913	ENSMUSP00000105539	TRANSLATION	protein_coding	-	CCDS40393.1	5	980	29	7.25	2.7	200.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000031540	Kat6a	ENSMUST00000238975	ENSMUSP00000159155	TRANSLATION	protein_coding	-	-	-	2053	32	9.75	0	316	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031540	Kat6a	ENSMUST00000130718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031540	Kat6a	ENSMUST00000044331	ENSMUSP00000038181	TRANSLATION	protein_coding	-	CCDS40294.1	1	2003	32	9.75	0.5	316	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000031540	Kat6a	ENSMUST00000110696	ENSMUSP00000106324	TRANSLATION	protein_coding	-	CCDS40294.1	1	2003	32	9.75	0.5	316	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035930	Chst4	ENSMUST00000212934	ENSMUSP00000148756	TRANSLATION	protein_coding	stop	-	3	235	8	0	0	31	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000035930	Chst4	ENSMUST00000211894	ENSMUSP00000148741	TRANSLATION	protein_coding	-	-	1	471	12	0	0	82.6	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000035930	Chst4	ENSMUST00000109222	ENSMUSP00000104845	TRANSLATION	protein_coding	-	CCDS22659.1	1	388	12	0	1.5	82.6	0	-1,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000031561	Tenm3	ENSMUST00000190840	ENSMUSP00000140141	TRANSLATION	protein_coding	-	CCDS85538.1	1	2699	0	3.94	7.1	662.1	3	-4,-6	-	-	14.958	ALTERNATIVE:1
ENSMUSG00000031561	Tenm3	ENSMUST00000033965	ENSMUSP00000033965	TRANSLATION	protein_coding	-	CCDS22303.1	1	2715	0	3.9598	7.1	662.1	3	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000031561	Tenm3	ENSMUST00000211976	ENSMUSP00000148613	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	126	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000031561	Tenm3	ENSMUST00000211812	ENSMUSP00000148666	TRANSLATION	protein_coding	stop	-	5	169	0	0	0	299.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031561	Tenm3	ENSMUST00000110346	ENSMUSP00000105975	TRANSLATION	protein_coding	-	-	1	495	0	2.86	0	93.5	3	-4,0	-	-	3.798	MINOR
ENSMUSG00000031561	Tenm3	ENSMUST00000110343	ENSMUSP00000105972	TRANSLATION	protein_coding	stop	-	2	57	0	0	0	70.5	3	-4,0	-	-	-1	MINOR
ENSMUSG00000031561	Tenm3	ENSMUST00000145344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031561	Tenm3	ENSMUST00000110345	ENSMUSP00000105974	TRANSLATION	protein_coding	stop	-	2	57	0	0	0	70.5	3	-4,0	-	-	-1	MINOR
ENSMUSG00000046282	Adam20	ENSMUST00000056331	ENSMUSP00000057794	TRANSLATION	protein_coding	-	CCDS40325.1	1	760	16	0.48	0.5	408.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031492	Chrnb3	ENSMUST00000060943	ENSMUSP00000052297	TRANSLATION	protein_coding	-	CCDS22217.1	1	464	0	4.5	1.5	462.3	5	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031492	Chrnb3	ENSMUST00000079463	ENSMUSP00000078428	TRANSLATION	protein_coding	-	CCDS22216.1	1	449	0	4	0.5	408.9	5	0,-4	-	-	7.794	MINOR
ENSMUSG00000031492	Chrnb3	ENSMUST00000211104	ENSMUSP00000147672	TRANSLATION	protein_coding	-	-	1	454	0	3.5	0	421.4	4	0,-4	-	-	7.548	MINOR
ENSMUSG00000008892	Vdac3	ENSMUST00000210096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008892	Vdac3	ENSMUST00000211222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008892	Vdac3	ENSMUST00000179233	ENSMUSP00000136273	TRANSLATION	protein_coding	-	-	1	284	0	6.15	21.5	277.9	0	-4,-5	-	-	15.448	ALTERNATIVE:1
ENSMUSG00000008892	Vdac3	ENSMUST00000009036	ENSMUSP00000009036	TRANSLATION	protein_coding	-	CCDS22179.1	1	283	0	6.25	21.5	283.8	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000025588	Nat1	ENSMUST00000026677	ENSMUSP00000026677	TRANSLATION	protein_coding	-	CCDS22337.1	-	290	11	1	6.3	310.4	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000025588	Nat1	ENSMUST00000212171	ENSMUSP00000148354	TRANSLATION	protein_coding	-	-	5	293	11	1	6.3	310.4	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000058355	Abce1	ENSMUST00000080536	ENSMUSP00000079379	TRANSLATION	protein_coding	-	CCDS22438.1	1	599	31	15.1	19.5	211.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000058355	Abce1	ENSMUST00000211509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058355	Abce1	ENSMUST00000209354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058355	Abce1	ENSMUST00000213842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038215	Cep44	ENSMUST00000134162	ENSMUSP00000117526	TRANSLATION	protein_coding	stop	-	5	102	0	0	0	135.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038215	Cep44	ENSMUST00000123493	ENSMUSP00000116884	TRANSLATION	protein_coding	start	-	5	345	0	0	0	94.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038215	Cep44	ENSMUST00000130930	ENSMUSP00000118959	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	61.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038215	Cep44	ENSMUST00000210545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038215	Cep44	ENSMUST00000040330	ENSMUSP00000042586	TRANSLATION	protein_coding	-	CCDS22313.1	1	386	0	0	1.5	169.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038215	Cep44	ENSMUST00000127877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038215	Cep44	ENSMUST00000135337	ENSMUSP00000122835	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	92.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038215	Cep44	ENSMUST00000140107	ENSMUSP00000114502	TRANSLATION	protein_coding	stop	-	3	169	0	0	0	169.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038215	Cep44	ENSMUST00000211049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038215	Cep44	ENSMUST00000126830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054408	Spcs3	ENSMUST00000067476	ENSMUSP00000136527	TRANSLATION	protein_coding	-	CCDS57621.1	1	180	0	0	19.5	193.8	0	0,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031479	Vps36	ENSMUST00000033866	ENSMUSP00000033866	TRANSLATION	protein_coding	-	CCDS22171.1	1	386	0	11.33	17.3	206.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031479	Vps36	ENSMUST00000153949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066880	Zfp617	ENSMUST00000131544	ENSMUSP00000120213	TRANSLATION	protein_coding	stop	-	2	222	11	1.6	0	118.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066880	Zfp617	ENSMUST00000119003	ENSMUSP00000112926	TRANSLATION	protein_coding	-	CCDS52590.1	1	559	59	1.6	0.5	363.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069867	Pabpn1l	ENSMUST00000212966	ENSMUSP00000148736	TRANSLATION	protein_coding	-	-	1	288	0	3.3	0	57.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000069867	Pabpn1l	ENSMUST00000093059	ENSMUSP00000090747	TRANSLATION	protein_coding	-	CCDS22743.1	1	273	0	3.3	1.5	57.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000074030	Exoc8	ENSMUST00000098312	ENSMUSP00000095915	TRANSLATION	protein_coding	-	CCDS22777.1	-	716	0	0.4	1.5	253.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001482	Def8	ENSMUST00000108830	ENSMUSP00000104458	TRANSLATION	protein_coding	-	CCDS22759.1	1	448	22	0.8	5.1	253.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000001482	Def8	ENSMUST00000212827	ENSMUSP00000148360	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000108832	ENSMUSP00000104460	TRANSLATION	protein_coding	-	CCDS57648.1	5	472	22	0.8	0.5	253.9	0	-4,-6	-	-	18	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000065534	ENSMUSP00000070579	TRANSLATION	protein_coding	-	CCDS22759.1	1	448	22	0.8	5.1	253.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000001482	Def8	ENSMUST00000124741	ENSMUSP00000122532	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000212883	ENSMUSP00000148280	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000093049	ENSMUSP00000090737	TRANSLATION	protein_coding	-	-	1	483	21	0.8	0	237.4	0	-4,-5	-	-	16.344	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000132063	ENSMUSP00000120265	TRANSLATION	protein_coding	stop	-	5	99	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000001522	ENSMUSP00000001522	TRANSLATION	protein_coding	-	CCDS57647.1	1	460	22	0.8	0.5	253.9	0	-4,-6	-	-	18	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000212391	ENSMUSP00000148771	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001482	Def8	ENSMUST00000128424	ENSMUSP00000115137	TRANSLATION	protein_coding	stop	-	3	218	8	0.8	0	28.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031986	Sprtn	ENSMUST00000212724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031986	Sprtn	ENSMUST00000034467	ENSMUSP00000034467	TRANSLATION	protein_coding	-	CCDS52705.1	1	497	4	0	1.5	113.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000095845	Gm5741	ENSMUST00000177563	ENSMUSP00000136655	TRANSLATION	protein_coding	-	CCDS57629.1	1	72	0	2	8.8	55.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031730	Dhodh	ENSMUST00000146064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031730	Dhodh	ENSMUST00000124138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031730	Dhodh	ENSMUST00000128350	ENSMUSP00000118612	TRANSLATION	protein_coding	stop	-	2	103	9	2.08	0	95.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031730	Dhodh	ENSMUST00000133353	ENSMUSP00000114190	TRANSLATION	nonsense_mediated_decay	start	-	5	96	9	1.33	0	103.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031730	Dhodh	ENSMUST00000142106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031730	Dhodh	ENSMUST00000131107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031730	Dhodh	ENSMUST00000150804	ENSMUSP00000115549	TRANSLATION	nonsense_mediated_decay	start	-	5	167	10	3.23	0	102.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000031730	Dhodh	ENSMUST00000125222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031730	Dhodh	ENSMUST00000123605	ENSMUSP00000115934	TRANSLATION	protein_coding	-	CCDS40471.1	1	395	29	8.33	6.4	386.3	0	-3,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000031730	Dhodh	ENSMUST00000125779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031730	Dhodh	ENSMUST00000143900	ENSMUSP00000117980	TRANSLATION	protein_coding	-	-	5	277	19	5.83	0	237	0	-3,-7	-	-	1.002	MINOR
ENSMUSG00000090137	Uba52	ENSMUST00000124967	ENSMUSP00000122797	TRANSLATION	protein_coding	stop	-	1	96	0	2.75	0	154.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090137	Uba52	ENSMUST00000129909	ENSMUSP00000121149	TRANSLATION	protein_coding	-	CCDS22371.1	2	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090137	Uba52	ENSMUST00000135446	ENSMUSP00000123562	TRANSLATION	protein_coding	-	CCDS22371.1	3	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090137	Uba52	ENSMUST00000125184	ENSMUSP00000120096	TRANSLATION	protein_coding	-	CCDS22371.1	1	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090137	Uba52	ENSMUST00000081940	ENSMUSP00000080608	TRANSLATION	protein_coding	-	CCDS22371.1	2	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090137	Uba52	ENSMUST00000165126	ENSMUSP00000137461	TRANSLATION	protein_coding	-	CCDS22371.1	1	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090137	Uba52	ENSMUST00000127793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090137	Uba52	ENSMUST00000140679	ENSMUSP00000123263	TRANSLATION	protein_coding	-	CCDS22371.1	2	128	4	3.75	17.5	231.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000156561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000124113	ENSMUSP00000119743	TRANSLATION	nonsense_mediated_decay	-	-	2	121	0	0	0	147.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000132964	ENSMUSP00000123583	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	164.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000141957	ENSMUSP00000119148	TRANSLATION	nonsense_mediated_decay	-	-	1	165	0	0	0	186.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000034361	ENSMUSP00000034361	TRANSLATION	protein_coding	-	CCDS22593.1	1	422	0	0	15.3	540	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031889	D230025D16Rik	ENSMUST00000133035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109372	Gm19410	ENSMUST00000207505	ENSMUSP00000147162	TRANSLATION	protein_coding	-	-	5	2098	58	12.8	0.5	503.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000003575	Crtc1	ENSMUST00000125273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003575	Crtc1	ENSMUST00000076615	ENSMUSP00000075916	TRANSLATION	protein_coding	-	CCDS40372.1	1	630	0	1	1.5	402.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003575	Crtc1	ENSMUST00000125613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003575	Crtc1	ENSMUST00000142769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003575	Crtc1	ENSMUST00000153632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000759	Tubgcp3	ENSMUST00000167547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000759	Tubgcp3	ENSMUST00000000776	ENSMUSP00000000776	TRANSLATION	protein_coding	-	CCDS22103.1	1	905	0	5.21	6.1	408	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000759	Tubgcp3	ENSMUST00000164611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000759	Tubgcp3	ENSMUST00000164971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000759	Tubgcp3	ENSMUST00000168657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000759	Tubgcp3	ENSMUST00000164861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000759	Tubgcp3	ENSMUST00000164774	ENSMUSP00000127741	TRANSLATION	nonsense_mediated_decay	-	-	1	364	0	0.135	0	49.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000759	Tubgcp3	ENSMUST00000165321	ENSMUSP00000131051	TRANSLATION	nonsense_mediated_decay	start	-	3	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000759	Tubgcp3	ENSMUST00000172056	ENSMUSP00000130106	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006517	Mvd	ENSMUST00000006692	ENSMUSP00000006692	TRANSLATION	protein_coding	-	CCDS22738.1	1	401	14	9	7.5	25.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000006517	Mvd	ENSMUST00000211883	ENSMUSP00000148539	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	1.98	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043051	Disc1	ENSMUST00000115885	ENSMUSP00000111552	TRANSLATION	protein_coding	-	-	5	789	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043051	Disc1	ENSMUST00000117658	ENSMUSP00000112757	TRANSLATION	protein_coding	-	CCDS40517.1	1	789	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000043051	Disc1	ENSMUST00000074562	ENSMUSP00000074147	TRANSLATION	protein_coding	-	-	5	852	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043051	Disc1	ENSMUST00000098311	ENSMUSP00000095914	TRANSLATION	protein_coding	-	CCDS52707.1	1	852	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043051	Disc1	ENSMUST00000118942	ENSMUSP00000112410	TRANSLATION	protein_coding	-	CCDS52707.1	1	852	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043051	Disc1	ENSMUST00000122389	ENSMUSP00000112593	TRANSLATION	protein_coding	-	-	1	387	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043051	Disc1	ENSMUST00000126111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043051	Disc1	ENSMUST00000075730	ENSMUSP00000075145	TRANSLATION	protein_coding	-	CCDS40517.1	5	789	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000043051	Disc1	ENSMUST00000121953	ENSMUSP00000112929	TRANSLATION	protein_coding	-	-	1	850	0	0	0	0	0	-3,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000031517	Gpm6a	ENSMUST00000033915	ENSMUSP00000033915	TRANSLATION	protein_coding	-	CCDS22310.1	1	278	0	0	17.5	306.1	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000079114	Defa42	ENSMUST00000110752	ENSMUSP00000106380	TRANSLATION	protein_coding	-	CCDS52508.1	1	116	0	0	0.5	82.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000036534	Slc38a7	ENSMUST00000040481	ENSMUSP00000037023	TRANSLATION	protein_coding	-	CCDS22567.1	1	463	0	0	6.3	193.2	12	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036534	Slc38a7	ENSMUST00000142881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036534	Slc38a7	ENSMUST00000212270	ENSMUSP00000148659	TRANSLATION	protein_coding	-	CCDS22567.1	1	463	0	0	6.3	193.2	12	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036534	Slc38a7	ENSMUST00000212628	ENSMUSP00000148545	TRANSLATION	protein_coding	stop	-	5	409	0	0	0	184.3	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000036534	Slc38a7	ENSMUST00000153835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031722	Hp	ENSMUST00000074898	ENSMUSP00000074436	TRANSLATION	protein_coding	-	CCDS40470.1	1	347	3	3.5	3.9	175	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000031722	Hp	ENSMUST00000212918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031722	Hp	ENSMUST00000212018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033409	Syce1l	ENSMUST00000095173	ENSMUSP00000092796	TRANSLATION	protein_coding	-	CCDS40483.1	1	247	0	0	1.5	148.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033409	Syce1l	ENSMUST00000034219	ENSMUSP00000034219	TRANSLATION	protein_coding	-	CCDS40484.1	1	242	0	0	0.5	123.3	0	-4,-5	-	-	4.476	MINOR
ENSMUSG00000033409	Syce1l	ENSMUST00000212269	ENSMUSP00000148356	TRANSLATION	protein_coding	-	CCDS85617.1	1	226	0	0	0.5	148.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033409	Syce1l	ENSMUST00000212017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019433	Gipc1	ENSMUST00000019577	ENSMUSP00000019577	TRANSLATION	protein_coding	-	CCDS22457.1	1	333	0	2.3	10.8	33.2	0	-4,-6	-	-	14.658	PRINCIPAL:1
ENSMUSG00000019433	Gipc1	ENSMUST00000212463	ENSMUSP00000148824	TRANSLATION	protein_coding	stop	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019433	Gipc1	ENSMUST00000211985	ENSMUSP00000148847	TRANSLATION	protein_coding	stop	-	3	105	0	1.8	0	35.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053790	Defb38	ENSMUST00000066416	ENSMUSP00000067553	TRANSLATION	protein_coding	-	CCDS40248.1	1	63	0	0	1.5	49.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039509	Nup133	ENSMUST00000213089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039509	Nup133	ENSMUST00000212133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039509	Nup133	ENSMUST00000044795	ENSMUSP00000048084	TRANSLATION	protein_coding	-	CCDS22765.1	1	1155	0	25.25	2.7	82.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046881	Olfr374	ENSMUST00000210923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046881	Olfr374	ENSMUST00000210435	ENSMUSP00000147605	TRANSLATION	protein_coding	-	CCDS22407.1	2	313	0	0.3	0.5	202.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000046881	Olfr374	ENSMUST00000209675	ENSMUSP00000147795	TRANSLATION	protein_coding	-	CCDS22407.1	-	313	0	0.3	0.5	202.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000013974	Mcemp1	ENSMUST00000014118	ENSMUSP00000014118	TRANSLATION	protein_coding	-	CCDS22069.1	1	183	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056018	Ccdc7b	ENSMUST00000148621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056018	Ccdc7b	ENSMUST00000026912	ENSMUSP00000026912	TRANSLATION	protein_coding	-	CCDS52713.1	5	381	0	0	0.5	113.1	0	-4,-7	-	-	0.252	ALTERNATIVE:2
ENSMUSG00000056018	Ccdc7b	ENSMUST00000108745	ENSMUSP00000104378	TRANSLATION	protein_coding	-	CCDS52714.1	1	183	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000056018	Ccdc7b	ENSMUST00000140887	ENSMUSP00000119034	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	0	0	208.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056018	Ccdc7b	ENSMUST00000189055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056018	Ccdc7b	ENSMUST00000108744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056018	Ccdc7b	ENSMUST00000148234	ENSMUSP00000118197	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	0	0	208.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063362	Alg11	ENSMUST00000110737	ENSMUSP00000106365	TRANSLATION	protein_coding	-	CCDS40292.1	1	450	18	0.78	0.5	295.1	1	-2,-5	-	-	12	MINOR
ENSMUSG00000063362	Alg11	ENSMUST00000134474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063362	Alg11	ENSMUST00000131624	ENSMUSP00000119161	TRANSLATION	protein_coding	start/stop	-	3	160	0	0	0	193.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063362	Alg11	ENSMUST00000072572	ENSMUSP00000072382	TRANSLATION	protein_coding	-	CCDS57613.1	1	492	18	0.78	5.1	407.9	1	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000096014	Sox1	ENSMUST00000180353	ENSMUSP00000137203	TRANSLATION	protein_coding	-	CCDS57605.1	-	391	0	0.6	2.9	202.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000013158	4933405L10Rik	ENSMUST00000212144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013158	4933405L10Rik	ENSMUST00000013302	ENSMUSP00000013302	TRANSLATION	protein_coding	-	CCDS52661.1	1	307	0	0	1.5	228.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000013158	4933405L10Rik	ENSMUST00000211852	ENSMUSP00000148838	TRANSLATION	protein_coding	-	-	1	298	0	0	0.5	228.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000000791	Il12rb1	ENSMUST00000212146	ENSMUSP00000148314	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000791	Il12rb1	ENSMUST00000212251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000791	Il12rb1	ENSMUST00000212826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000791	Il12rb1	ENSMUST00000212657	ENSMUSP00000148279	TRANSLATION	protein_coding	-	-	5	668	0	0	0.5	48.7	0	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000000791	Il12rb1	ENSMUST00000000808	ENSMUSP00000000808	TRANSLATION	protein_coding	-	CCDS22382.1	1	738	0	0	1.5	48.7	0	0,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000000791	Il12rb1	ENSMUST00000211936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000134023	ENSMUSP00000118793	TRANSLATION	protein_coding	-	CCDS52488.1	1	237	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000209207	ENSMUSP00000147812	TRANSLATION	nonsense_mediated_decay	-	-	1	237	0	0	1.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000132787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000187391	ENSMUSP00000140119	TRANSLATION	protein_coding	-	CCDS40233.1	1	219	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000033830	ENSMUSP00000033830	TRANSLATION	nonsense_mediated_decay	-	-	1	219	0	0	1.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031452	1700029H14Rik	ENSMUST00000151400	ENSMUSP00000120739	TRANSLATION	protein_coding	-	-	5	240	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031785	Adgrg1	ENSMUST00000093271	ENSMUSP00000090959	TRANSLATION	protein_coding	-	CCDS22553.1	1	687	0	10.962	1.5	149.1	5	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031785	Adgrg1	ENSMUST00000212976	ENSMUSP00000148439	TRANSLATION	protein_coding	stop	-	3	229	0	5.042	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000211984	ENSMUSP00000148412	TRANSLATION	protein_coding	stop	-	5	185	0	3.792	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000179619	ENSMUSP00000137520	TRANSLATION	protein_coding	-	CCDS22553.1	1	687	0	10.962	1.5	149.1	5	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031785	Adgrg1	ENSMUST00000211911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031785	Adgrg1	ENSMUST00000212799	ENSMUSP00000148349	TRANSLATION	protein_coding	stop	-	3	149	0	2.792	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212956	ENSMUSP00000148374	TRANSLATION	protein_coding	stop	-	3	112	0	1.462	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212660	ENSMUSP00000148644	TRANSLATION	nonsense_mediated_decay	-	-	1	687	0	10.962	1.5	149.1	5	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212531	ENSMUSP00000148650	TRANSLATION	protein_coding	stop	-	3	118	0	1.462	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000211806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031785	Adgrg1	ENSMUST00000212995	ENSMUSP00000148309	TRANSLATION	protein_coding	stop	-	3	20	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212581	ENSMUSP00000148742	TRANSLATION	protein_coding	stop	-	3	105	0	1.132	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212118	ENSMUSP00000148304	TRANSLATION	protein_coding	stop	-	5	167	0	3.292	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000211850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031785	Adgrg1	ENSMUST00000211944	ENSMUSP00000148386	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031785	Adgrg1	ENSMUST00000212141	ENSMUSP00000148331	TRANSLATION	protein_coding	stop	-	2	256	0	6.042	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000053693	Mast1	ENSMUST00000128356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053693	Mast1	ENSMUST00000138221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053693	Mast1	ENSMUST00000153000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053693	Mast1	ENSMUST00000130923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053693	Mast1	ENSMUST00000109741	ENSMUSP00000105363	TRANSLATION	protein_coding	-	CCDS40415.1	1	1570	19	8.55	3.9	692.7	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000053693	Mast1	ENSMUST00000119820	ENSMUSP00000113547	TRANSLATION	protein_coding	-	-	5	658	19	6.82	0	648.5	0	-4,-6	-	-	11.886	MINOR
ENSMUSG00000110430	Cmtm1	ENSMUST00000164175	ENSMUSP00000132828	TRANSLATION	protein_coding	-	-	5	220	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000110430	Cmtm1	ENSMUST00000159039	ENSMUSP00000124855	TRANSLATION	protein_coding	-	CCDS57636.1	1	303	0	0	0.5	0	3	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000110430	Cmtm1	ENSMUST00000160596	ENSMUSP00000124656	TRANSLATION	protein_coding	-	-	5	391	0	0	0	0	3	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000031904	Slc7a6	ENSMUST00000211824	ENSMUSP00000148620	TRANSLATION	protein_coding	stop	-	5	232	0	2.408	0	41.1	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000031904	Slc7a6	ENSMUST00000213020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031904	Slc7a6	ENSMUST00000212421	ENSMUSP00000148353	TRANSLATION	protein_coding	stop	-	2	79	0	1.728	0	29.8	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000031904	Slc7a6	ENSMUST00000212377	ENSMUSP00000148693	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031904	Slc7a6	ENSMUST00000212837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031904	Slc7a6	ENSMUST00000034378	ENSMUSP00000034378	TRANSLATION	protein_coding	-	CCDS22631.1	1	515	0	5.048	3.9	88.5	12	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031904	Slc7a6	ENSMUST00000212802	ENSMUSP00000148794	TRANSLATION	protein_coding	stop	-	3	174	0	1.49	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000062826	Ces2f	ENSMUST00000212926	ENSMUSP00000148840	TRANSLATION	protein_coding	-	-	1	430	2	7.065	0	301.9	0	0,-3	-	-	3.996	MINOR
ENSMUSG00000062826	Ces2f	ENSMUST00000076384	ENSMUSP00000075722	TRANSLATION	protein_coding	-	CCDS40453.1	1	561	6	9.065	0.5	550.3	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000062826	Ces2f	ENSMUST00000212820	ENSMUSP00000148278	TRANSLATION	nonsense_mediated_decay	-	-	1	561	6	9.065	0.5	550.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000060098	Prmt7	ENSMUST00000128201	ENSMUSP00000119992	TRANSLATION	protein_coding	start	-	1	298	24	6.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060098	Prmt7	ENSMUST00000134151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060098	Prmt7	ENSMUST00000109297	ENSMUSP00000104920	TRANSLATION	protein_coding	-	-	1	217	24	5.03	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000060098	Prmt7	ENSMUST00000109296	ENSMUSP00000104919	TRANSLATION	protein_coding	stop	-	3	113	16	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060098	Prmt7	ENSMUST00000147063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060098	Prmt7	ENSMUST00000153272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060098	Prmt7	ENSMUST00000071592	ENSMUSP00000071521	TRANSLATION	protein_coding	-	CCDS22633.1	1	692	24	15.75	6.3	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074473	A230072I06Rik	ENSMUST00000098935	ENSMUSP00000096536	TRANSLATION	protein_coding	-	-	-	172	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000031917	Nip7	ENSMUST00000034392	ENSMUSP00000034392	TRANSLATION	protein_coding	-	CCDS22644.1	1	180	0	4.25	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031917	Nip7	ENSMUST00000212281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031917	Nip7	ENSMUST00000170962	ENSMUSP00000126153	TRANSLATION	protein_coding	-	CCDS52665.1	3	133	0	3.25	1.7	0	0	-4,-5	-	-	4.138	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000159851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036564	Ndrg4	ENSMUST00000159632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036564	Ndrg4	ENSMUST00000166358	ENSMUSP00000131203	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000161314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036564	Ndrg4	ENSMUST00000160964	ENSMUSP00000125703	TRANSLATION	protein_coding	stop	-	5	224	0	5.75	0	276.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000212160	ENSMUSP00000148779	TRANSLATION	protein_coding	stop	-	5	197	0	5.7	0	253.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000073139	ENSMUSP00000072883	TRANSLATION	protein_coding	-	CCDS57634.1	1	352	0	8.45	17.5	412.1	0	-4,-5	-	-	15.946	ALTERNATIVE:1
ENSMUSG00000036564	Ndrg4	ENSMUST00000041318	ENSMUSP00000036226	TRANSLATION	protein_coding	-	-	1	404	0	8.45	9.8	412.1	0	0,-3	-	-	14.078	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000162578	ENSMUSP00000148590	TRANSLATION	protein_coding	start	-	2	109	0	1.5	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000160915	ENSMUSP00000148614	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036564	Ndrg4	ENSMUST00000080666	ENSMUSP00000079495	TRANSLATION	protein_coding	-	CCDS22565.1	1	339	0	8.45	15.5	413	0	-4,-5	-	-	15.516	PRINCIPAL:3
ENSMUSG00000031578	Mak16	ENSMUST00000209991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031578	Mak16	ENSMUST00000033983	ENSMUSP00000033983	TRANSLATION	protein_coding	-	CCDS22222.1	1	296	0	0	1.7	238.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031578	Mak16	ENSMUST00000210278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031578	Mak16	ENSMUST00000210450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078964	Ces1b	ENSMUST00000109582	ENSMUSP00000105210	TRANSLATION	protein_coding	-	CCDS40431.1	5	567	6	11.72	0.5	537.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031673	Cdh11	ENSMUST00000210578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031673	Cdh11	ENSMUST00000075190	ENSMUSP00000074681	TRANSLATION	protein_coding	-	CCDS22571.1	1	796	48	9.02	8.8	415.5	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000031673	Cdh11	ENSMUST00000210425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031950	Gabarapl2	ENSMUST00000130808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031950	Gabarapl2	ENSMUST00000133628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031950	Gabarapl2	ENSMUST00000034428	ENSMUSP00000034428	TRANSLATION	protein_coding	-	CCDS40480.1	1	117	0	2.75	21.5	168.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002345	Borcs8	ENSMUST00000110139	ENSMUSP00000105766	TRANSLATION	protein_coding	-	CCDS85553.1	3	113	0	0	0.5	134.6	0	-4,-5	-	-	5.574	MINOR
ENSMUSG00000002345	Borcs8	ENSMUST00000123976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002345	Borcs8	ENSMUST00000123760	ENSMUSP00000118102	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	103.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002345	Borcs8	ENSMUST00000002418	ENSMUSP00000002418	TRANSLATION	protein_coding	-	CCDS52568.1	1	120	0	0	2.7	141.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000002345	Borcs8	ENSMUST00000129668	ENSMUSP00000137694	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	103.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056426	Nat3	ENSMUST00000070514	ENSMUSP00000069359	TRANSLATION	protein_coding	-	CCDS22339.1	1	290	3	1	3.9	295.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079058	Adam34	ENSMUST00000110411	ENSMUSP00000106041	TRANSLATION	protein_coding	-	CCDS22271.1	5	714	24	0.48	0.5	417.7	1	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000079058	Adam34	ENSMUST00000212185	ENSMUSP00000148332	TRANSLATION	protein_coding	-	CCDS22271.1	1	714	24	0.48	0.5	417.7	1	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000031919	Tmed6	ENSMUST00000034393	ENSMUSP00000034393	TRANSLATION	protein_coding	-	CCDS22645.1	1	239	0	0	7.5	106.3	0	3,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000055976	Cldn23	ENSMUST00000210370	ENSMUSP00000147260	TRANSLATION	protein_coding	start	-	2	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055976	Cldn23	ENSMUST00000060128	ENSMUSP00000049725	TRANSLATION	protein_coding	-	CCDS22246.1	-	296	0	0.32	1.5	61.4	0	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000019428	Fkbp8	ENSMUST00000126613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019428	Fkbp8	ENSMUST00000119425	ENSMUSP00000113528	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019428	Fkbp8	ENSMUST00000119353	ENSMUSP00000112527	TRANSLATION	protein_coding	-	CCDS52576.1	1	402	0	6.95	1.5	83.4	1	-4,-5	-	-	11.958	ALTERNATIVE:2
ENSMUSG00000019428	Fkbp8	ENSMUST00000075491	ENSMUSP00000074935	TRANSLATION	protein_coding	-	CCDS52575.1	1	403	0	6.95	1.5	84	1	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000019428	Fkbp8	ENSMUST00000119698	ENSMUSP00000114069	TRANSLATION	protein_coding	-	CCDS52575.1	1	403	0	6.95	1.5	84	1	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000019428	Fkbp8	ENSMUST00000125741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019428	Fkbp8	ENSMUST00000128513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019428	Fkbp8	ENSMUST00000134299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019428	Fkbp8	ENSMUST00000144766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019428	Fkbp8	ENSMUST00000134893	ENSMUSP00000118843	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019428	Fkbp8	ENSMUST00000123052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031834	Pik3r2	ENSMUST00000143785	ENSMUSP00000122065	TRANSLATION	protein_coding	start	-	3	71	0	1.5	0	51.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031834	Pik3r2	ENSMUST00000142370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031834	Pik3r2	ENSMUST00000146707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031834	Pik3r2	ENSMUST00000154685	ENSMUSP00000121463	TRANSLATION	protein_coding	start/stop	-	1	84	0	1.3432	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031834	Pik3r2	ENSMUST00000152545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031834	Pik3r2	ENSMUST00000034296	ENSMUSP00000034296	TRANSLATION	protein_coding	-	CCDS22381.1	1	722	0	13.7532	0.5	384.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059854	Hydin	ENSMUST00000212218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059854	Hydin	ENSMUST00000043141	ENSMUSP00000046204	TRANSLATION	protein_coding	-	CCDS40476.1	1	5154	9	4.85	0.5	341.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059854	Hydin	ENSMUST00000212034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033594	Spata2l	ENSMUST00000166768	ENSMUSP00000130306	TRANSLATION	protein_coding	-	CCDS22752.1	1	426	0	0.33	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033594	Spata2l	ENSMUST00000211845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033594	Spata2l	ENSMUST00000212818	ENSMUSP00000148755	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033594	Spata2l	ENSMUST00000098327	ENSMUSP00000095932	TRANSLATION	protein_coding	-	CCDS22752.1	1	426	0	0.33	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000000303	Cdh1	ENSMUST00000167688	ENSMUSP00000132112	TRANSLATION	protein_coding	-	CCDS22638.1	5	884	64	15	2.7	513.1	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000303	Cdh1	ENSMUST00000000312	ENSMUSP00000000312	TRANSLATION	protein_coding	-	CCDS22638.1	1	884	64	15	2.7	513.1	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000303	Cdh1	ENSMUST00000136580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031725	Ces1f	ENSMUST00000140026	ENSMUSP00000116525	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0.2	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000031725	Ces1f	ENSMUST00000133879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031725	Ces1f	ENSMUST00000151261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031725	Ces1f	ENSMUST00000124066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031725	Ces1f	ENSMUST00000034178	ENSMUSP00000034178	TRANSLATION	protein_coding	-	CCDS22530.1	1	561	6	12.28	1.5	531.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031725	Ces1f	ENSMUST00000156737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031751	Amfr	ENSMUST00000143265	ENSMUSP00000134924	TRANSLATION	protein_coding	stop	-	5	105	0	0	0	0	5	-1,-4	-	-	-1	MINOR
ENSMUSG00000031751	Amfr	ENSMUST00000137475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031751	Amfr	ENSMUST00000053766	ENSMUSP00000052258	TRANSLATION	protein_coding	-	CCDS22533.1	1	639	8	4.2	2.9	83.5	8	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031751	Amfr	ENSMUST00000139702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037070	Rbmxl1	ENSMUST00000049245	ENSMUSP00000048153	TRANSLATION	protein_coding	-	CCDS22430.1	1	388	0	0.6	1.5	160.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037070	Rbmxl1	ENSMUST00000211719	ENSMUSP00000147384	TRANSLATION	protein_coding	-	CCDS22430.1	1	388	0	0.6	1.5	160.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062687	Cks1brt	ENSMUST00000211617	ENSMUSP00000147685	TRANSLATION	protein_coding	-	CCDS52622.1	1	96	0	1	0.5	117	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062687	Cks1brt	ENSMUST00000076896	ENSMUSP00000076162	TRANSLATION	protein_coding	-	CCDS52622.1	-	96	0	1	0.5	117	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031527	Eri1	ENSMUST00000211536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031527	Eri1	ENSMUST00000210483	ENSMUSP00000148099	TRANSLATION	protein_coding	stop	-	3	50	0	1.5	0	35.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031527	Eri1	ENSMUST00000210884	ENSMUSP00000147464	TRANSLATION	protein_coding	stop	-	3	94	6	2.5	0	35.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031527	Eri1	ENSMUST00000033927	ENSMUSP00000033927	TRANSLATION	protein_coding	-	CCDS22244.1	1	345	13	7.85	3.9	139.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039328	Rnf122	ENSMUST00000046941	ENSMUSP00000040478	TRANSLATION	protein_coding	-	CCDS22220.1	1	154	8	2.15	11.8	47.2	2	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000039328	Rnf122	ENSMUST00000217278	ENSMUSP00000150893	TRANSLATION	protein_coding	-	-	1	155	8	2.15	11.8	47.2	2	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000039328	Rnf122	ENSMUST00000162640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039328	Rnf122	ENSMUST00000209547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039328	Rnf122	ENSMUST00000216520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050914	Ankrd37	ENSMUST00000131008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050914	Ankrd37	ENSMUST00000210971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050914	Ankrd37	ENSMUST00000144525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050914	Ankrd37	ENSMUST00000153674	ENSMUSP00000147774	TRANSLATION	nonsense_mediated_decay	start	-	1	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050914	Ankrd37	ENSMUST00000141334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050914	Ankrd37	ENSMUST00000053558	ENSMUSP00000056828	TRANSLATION	protein_coding	-	CCDS22285.1	1	159	0	2.664	2.7	41	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000013033	Adgrl1	ENSMUST00000045393	ENSMUSP00000048422	TRANSLATION	protein_coding	-	-	5	1471	6	13.6	7.5	1339.9	11	0,-4	-	-	21	ALTERNATIVE:1
ENSMUSG00000013033	Adgrl1	ENSMUST00000132500	ENSMUSP00000119100	TRANSLATION	protein_coding	-	-	5	1511	6	13.6	0	1331.5	11	0,-4	-	-	17.496	MINOR
ENSMUSG00000013033	Adgrl1	ENSMUST00000139575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013033	Adgrl1	ENSMUST00000141661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013033	Adgrl1	ENSMUST00000124355	ENSMUSP00000116064	TRANSLATION	nonsense_mediated_decay	-	-	5	141	6	2.066	0	85.6	0	0,-4	-	-	-1	MINOR
ENSMUSG00000013033	Adgrl1	ENSMUST00000141158	ENSMUSP00000118452	TRANSLATION	protein_coding	-	CCDS52613.1	1	1466	6	13.6	6.5	1339.9	11	0,-4	-	-	20.538	PRINCIPAL:2
ENSMUSG00000013033	Adgrl1	ENSMUST00000131717	ENSMUSP00000118579	TRANSLATION	protein_coding	-	-	1	1295	0	10.6	1.7	1222.2	11	-4,-5	-	-	0.324	MINOR
ENSMUSG00000013033	Adgrl1	ENSMUST00000131018	ENSMUSP00000117720	TRANSLATION	protein_coding	start/stop	-	3	213	0	0	0	251.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013033	Adgrl1	ENSMUST00000152978	ENSMUSP00000115295	TRANSLATION	protein_coding	-	-	5	1516	6	13.6	0	1331.5	11	0,-4	-	-	17.496	MINOR
ENSMUSG00000013033	Adgrl1	ENSMUST00000150674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056204	Pgpep1	ENSMUST00000211715	ENSMUSP00000148119	TRANSLATION	protein_coding	-	-	3	112	0	1.645	0	0	0	-4,-6	-	-	1.17	MINOR
ENSMUSG00000056204	Pgpep1	ENSMUST00000210307	ENSMUSP00000147879	TRANSLATION	protein_coding	stop	-	3	122	0	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056204	Pgpep1	ENSMUST00000211526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056204	Pgpep1	ENSMUST00000210786	ENSMUSP00000148241	TRANSLATION	nonsense_mediated_decay	start	-	5	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056204	Pgpep1	ENSMUST00000210193	ENSMUSP00000148163	TRANSLATION	protein_coding	stop	-	3	28	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056204	Pgpep1	ENSMUST00000210459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056204	Pgpep1	ENSMUST00000209768	ENSMUSP00000148141	TRANSLATION	protein_coding	stop	-	5	118	0	2.362	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056204	Pgpep1	ENSMUST00000070173	ENSMUSP00000070778	TRANSLATION	protein_coding	-	CCDS22377.1	1	209	0	4.061	9.1	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036246	Gmip	ENSMUST00000154903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036246	Gmip	ENSMUST00000138269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036246	Gmip	ENSMUST00000142659	ENSMUSP00000114525	TRANSLATION	protein_coding	start	-	2	115	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036246	Gmip	ENSMUST00000127114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036246	Gmip	ENSMUST00000143744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036246	Gmip	ENSMUST00000123453	ENSMUSP00000116542	TRANSLATION	protein_coding	-	-	1	839	8	10.21	0	160.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036246	Gmip	ENSMUST00000156620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036246	Gmip	ENSMUST00000144540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036246	Gmip	ENSMUST00000036074	ENSMUSP00000045676	TRANSLATION	protein_coding	-	CCDS22350.1	1	971	8	10.21	1.5	160.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000060038	Dhps	ENSMUST00000152871	ENSMUSP00000120308	TRANSLATION	nonsense_mediated_decay	start	-	1	149	5	2	0	61.6	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000060038	Dhps	ENSMUST00000132766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060038	Dhps	ENSMUST00000142422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060038	Dhps	ENSMUST00000078665	ENSMUSP00000077733	TRANSLATION	protein_coding	-	CCDS22492.1	1	369	24	8.83	3.9	437.1	0	-1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000060038	Dhps	ENSMUST00000142210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060038	Dhps	ENSMUST00000129826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060038	Dhps	ENSMUST00000154575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060038	Dhps	ENSMUST00000132356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031981	Capn9	ENSMUST00000133086	ENSMUSP00000119938	TRANSLATION	protein_coding	stop	-	5	64	0	0.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031981	Capn9	ENSMUST00000093033	ENSMUSP00000090717	TRANSLATION	protein_coding	-	CCDS40514.1	1	690	24	16.48	6.3	630.1	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000031981	Capn9	ENSMUST00000133583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043090	Zfp866	ENSMUST00000131784	ENSMUSP00000116972	TRANSLATION	protein_coding	-	-	1	95	0	0.8	0	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000043090	Zfp866	ENSMUST00000137573	ENSMUSP00000119781	TRANSLATION	protein_coding	-	CCDS40361.1	1	520	52	2.4	1.5	260.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000052906	Ubxn8	ENSMUST00000210807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052906	Ubxn8	ENSMUST00000095349	ENSMUSP00000092992	TRANSLATION	protein_coding	-	CCDS22234.1	1	277	0	2.25	1.5	50.9	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031896	Ctrl	ENSMUST00000034368	ENSMUSP00000034368	TRANSLATION	protein_coding	-	CCDS22620.1	1	264	6	5.5	0.5	244.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031896	Ctrl	ENSMUST00000212561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031629	Cenpu	ENSMUST00000153908	ENSMUSP00000147322	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031629	Cenpu	ENSMUST00000129371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031629	Cenpu	ENSMUST00000093518	ENSMUSP00000091239	TRANSLATION	protein_coding	-	-	1	260	0	0	0	191.6	0	-4,0	-	-	3.306	MINOR
ENSMUSG00000031629	Cenpu	ENSMUST00000122838	ENSMUSP00000147798	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031629	Cenpu	ENSMUST00000136724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031629	Cenpu	ENSMUST00000135432	ENSMUSP00000120321	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031629	Cenpu	ENSMUST00000210368	ENSMUSP00000147789	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031629	Cenpu	ENSMUST00000211217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031629	Cenpu	ENSMUST00000034045	ENSMUSP00000034045	TRANSLATION	protein_coding	-	CCDS22292.1	1	410	0	0	0.5	236.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000097919	Gm27021	ENSMUST00000181333	ENSMUSP00000137785	TRANSLATION	protein_coding,RT	-	CCDS85621.1	4	156	0	0	0.5	218.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000014856	Tmem208	ENSMUST00000126705	ENSMUSP00000138226	TRANSLATION	nonsense_mediated_decay	-	-	2	100	0	0	0.5	88.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000014856	Tmem208	ENSMUST00000153146	ENSMUSP00000138470	TRANSLATION	nonsense_mediated_decay	-	-	3	100	0	0	0.5	88.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000014856	Tmem208	ENSMUST00000109372	ENSMUSP00000104997	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	0	0	89	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000014856	Tmem208	ENSMUST00000015000	ENSMUSP00000015000	TRANSLATION	protein_coding	-	CCDS22599.1	1	173	0	0	6.5	176.8	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000014856	Tmem208	ENSMUST00000098453	ENSMUSP00000096052	TRANSLATION	protein_coding	-	-	1	176	0	0	0	87.4	4	-4,-7	-	-	0.636	MINOR
ENSMUSG00000096188	Cmtm4	ENSMUST00000179802	ENSMUSP00000137332	TRANSLATION	protein_coding	-	CCDS22578.1	1	208	0	0	11.6	61.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000031488	Rab11fip1	ENSMUST00000211646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031488	Rab11fip1	ENSMUST00000033878	ENSMUSP00000033878	TRANSLATION	protein_coding	-	CCDS52534.1	1	645	0	2.1	0.5	127	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031488	Rab11fip1	ENSMUST00000210919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031488	Rab11fip1	ENSMUST00000054212	ENSMUSP00000058042	TRANSLATION	protein_coding	-	CCDS40311.1	5	1166	0	2.1	0.5	127	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000031488	Rab11fip1	ENSMUST00000210187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031488	Rab11fip1	ENSMUST00000209377	ENSMUSP00000147543	TRANSLATION	protein_coding	-	-	5	1127	0	0.6	0	64.7	0	-4,-2	-	-	3.978	MINOR
ENSMUSG00000046714	Foxc2	ENSMUST00000054691	ENSMUSP00000055290	TRANSLATION	protein_coding	-	CCDS40499.1	-	494	0	0.4	1.5	137.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074300	Smim31	ENSMUST00000098713	ENSMUSP00000147515	TRANSLATION	protein_coding	-	-	1	71	0	0	0	0	0	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000033430	Terf2ip	ENSMUST00000212732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033430	Terf2ip	ENSMUST00000052138	ENSMUSP00000052170	TRANSLATION	protein_coding	-	CCDS52678.1	1	393	0	1.6	1.5	163.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074156	Ces1h	ENSMUST00000145041	ENSMUSP00000121729	TRANSLATION	protein_coding	-	-	5	562	6	11.95	0.5	546.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000110469	Gm10358	ENSMUST00000212864	ENSMUSP00000148326	TRANSLATION	protein_coding	-	-	-	333	22	1	21.5	366.8	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000054033	Adam39	ENSMUST00000066814	ENSMUSP00000065783	TRANSLATION	protein_coding	-	CCDS40326.1	1	756	16	0.42	0.5	404	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000052616	Terb1	ENSMUST00000162014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052616	Terb1	ENSMUST00000159713	ENSMUSP00000124706	TRANSLATION	nonsense_mediated_decay	-	-	2	339	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052616	Terb1	ENSMUST00000064576	ENSMUSP00000067324	TRANSLATION	protein_coding	-	CCDS22580.1	1	768	0	1	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052616	Terb1	ENSMUST00000161520	ENSMUSP00000125431	TRANSLATION	nonsense_mediated_decay	-	-	2	340	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071103	1700029J07Rik	ENSMUST00000239252	ENSMUSP00000159248	TRANSLATION	nonsense_mediated_decay	-	-	-	119	0	0	0	129	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071103	1700029J07Rik	ENSMUST00000098786	ENSMUSP00000096383	TRANSLATION	protein_coding	-	CCDS22283.1	1	316	0	0	1.5	369.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071103	1700029J07Rik	ENSMUST00000095323	ENSMUSP00000092961	TRANSLATION	protein_coding	-	CCDS22283.1	1	316	0	0	1.5	369.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031669	Gins3	ENSMUST00000212434	ENSMUSP00000148516	TRANSLATION	protein_coding	-	-	2	144	0	2	0	25.9	0	-4,-5	-	-	8.562	MINOR
ENSMUSG00000031669	Gins3	ENSMUST00000034094	ENSMUSP00000034094	TRANSLATION	protein_coding	-	CCDS22564.1	1	216	0	3	7.6	34.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000110622	Iqcn	ENSMUST00000212436	ENSMUSP00000148728	TRANSLATION	protein_coding	-	-	5	1434	0	0	0.5	89.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000014444	Piezo1	ENSMUST00000134304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014444	Piezo1	ENSMUST00000123671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014444	Piezo1	ENSMUST00000128383	ENSMUSP00000116194	TRANSLATION	nonsense_mediated_decay	start	-	5	1003	0	0	0	227.3	23	0,-3	-	-	-1	MINOR
ENSMUSG00000014444	Piezo1	ENSMUST00000067252	ENSMUSP00000089777	TRANSLATION	protein_coding	-	CCDS52695.1	5	2546	0	10.75	0.5	838.2	25	-2,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000014444	Piezo1	ENSMUST00000148497	ENSMUSP00000121725	TRANSLATION	nonsense_mediated_decay	start	-	5	1085	0	0	0	322.3	17	-4,-6	-	-	-1	MINOR
ENSMUSG00000014444	Piezo1	ENSMUST00000152596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014444	Piezo1	ENSMUST00000155803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014444	Piezo1	ENSMUST00000126553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014444	Piezo1	ENSMUST00000156333	ENSMUSP00000114584	TRANSLATION	protein_coding	-	-	1	2547	0	10.75	0.5	838.2	25	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036054	Sugp2	ENSMUST00000133924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036054	Sugp2	ENSMUST00000130492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036054	Sugp2	ENSMUST00000156330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036054	Sugp2	ENSMUST00000155771	ENSMUSP00000120271	TRANSLATION	protein_coding	stop	-	3	175	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036054	Sugp2	ENSMUST00000148378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036054	Sugp2	ENSMUST00000145078	ENSMUSP00000114403	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036054	Sugp2	ENSMUST00000136758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036054	Sugp2	ENSMUST00000136391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036054	Sugp2	ENSMUST00000135640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036054	Sugp2	ENSMUST00000131489	ENSMUSP00000114833	TRANSLATION	nonsense_mediated_decay	-	-	2	1067	0	2.95	1.5	94.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036054	Sugp2	ENSMUST00000126239	ENSMUSP00000118748	TRANSLATION	protein_coding	start	-	1	244	0	0	0	57.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036054	Sugp2	ENSMUST00000164403	ENSMUSP00000128029	TRANSLATION	protein_coding	-	CCDS22362.1	1	1067	0	2.95	1.5	94.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036054	Sugp2	ENSMUST00000129402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036054	Sugp2	ENSMUST00000093458	ENSMUSP00000091167	TRANSLATION	protein_coding	-	CCDS22362.1	1	1067	0	2.95	1.5	94.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031545	Gpat4	ENSMUST00000211260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031545	Gpat4	ENSMUST00000209507	ENSMUSP00000147679	TRANSLATION	protein_coding	stop	-	5	146	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000031545	Gpat4	ENSMUST00000210992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031545	Gpat4	ENSMUST00000167004	ENSMUSP00000127325	TRANSLATION	protein_coding	-	CCDS22189.1	1	456	0	0	17	68	3	0,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031545	Gpat4	ENSMUST00000210782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050751	Pgbd5	ENSMUST00000140012	ENSMUSP00000120984	TRANSLATION	protein_coding	-	-	5	523	0	0	5.1	291.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000050751	Pgbd5	ENSMUST00000140126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050751	Pgbd5	ENSMUST00000172566	ENSMUSP00000133560	TRANSLATION	protein_coding	-	-	1	432	0	0	0	291.3	0	-4,-6	-	-	6	MINOR
ENSMUSG00000050751	Pgbd5	ENSMUST00000136892	ENSMUSP00000123265	TRANSLATION	protein_coding	-	CCDS22770.1	5	409	0	0	2.7	291.3	0	-4,-6	-	-	6.83	MINOR
ENSMUSG00000050751	Pgbd5	ENSMUST00000128312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050751	Pgbd5	ENSMUST00000052580	ENSMUSP00000054788	TRANSLATION	protein_coding	-	CCDS22770.1	5	409	0	0	2.7	291.3	0	-4,-6	-	-	6.83	MINOR
ENSMUSG00000059355	Wdr83os	ENSMUST00000140621	ENSMUSP00000117962	TRANSLATION	protein_coding	-	-	1	89	0	0	0	127.3	2	-4,-7	-	-	3.654	MINOR
ENSMUSG00000059355	Wdr83os	ENSMUST00000148592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059355	Wdr83os	ENSMUST00000079764	ENSMUSP00000078697	TRANSLATION	protein_coding	-	CCDS80909.1	1	106	0	0	15.5	166.4	3	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000031767	Nudt7	ENSMUST00000134593	ENSMUSP00000116868	TRANSLATION	protein_coding	-	CCDS80934.1	1	171	4	1.92	0.5	36.6	0	-4,-5	-	-	15.082	ALTERNATIVE:2
ENSMUSG00000031767	Nudt7	ENSMUST00000109109	ENSMUSP00000104737	TRANSLATION	protein_coding	-	CCDS80935.1	1	260	4	1.7	0.5	43.2	0	-4,-2	-	-	15.31	ALTERNATIVE:2
ENSMUSG00000031767	Nudt7	ENSMUST00000147605	ENSMUSP00000114598	TRANSLATION	protein_coding	-	CCDS22688.2	1	216	4	1.4	0.5	0	0	-4,-5	-	-	8.374	MINOR
ENSMUSG00000031767	Nudt7	ENSMUST00000073521	ENSMUSP00000073213	TRANSLATION	protein_coding	-	CCDS22687.1	1	236	4	1.7	1.5	43.2	0	-4,-5	-	-	15.31	PRINCIPAL:3
ENSMUSG00000031767	Nudt7	ENSMUST00000066514	ENSMUSP00000065791	TRANSLATION	protein_coding	-	CCDS80933.1	1	207	4	1.432	0.5	37.8	0	-4,-2	-	-	13.726	MINOR
ENSMUSG00000031487	Brf2	ENSMUST00000033877	ENSMUSP00000033877	TRANSLATION	protein_coding	-	CCDS22211.1	1	420	4	3.75	0.5	32.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031487	Brf2	ENSMUST00000210590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031487	Brf2	ENSMUST00000211151	ENSMUSP00000147950	TRANSLATION	nonsense_mediated_decay	-	-	5	85	4	0	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031487	Brf2	ENSMUST00000210552	ENSMUSP00000147711	TRANSLATION	nonsense_mediated_decay	-	-	1	85	4	0	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031487	Brf2	ENSMUST00000210230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031487	Brf2	ENSMUST00000211236	ENSMUSP00000147895	TRANSLATION	protein_coding	start	-	3	54	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031487	Brf2	ENSMUST00000209770	ENSMUSP00000147259	TRANSLATION	nonsense_mediated_decay	-	-	3	85	4	0	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046441	Cmtr2	ENSMUST00000056972	ENSMUSP00000060558	TRANSLATION	protein_coding	-	CCDS22662.1	1	767	22	0	1.5	96.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000046441	Cmtr2	ENSMUST00000189685	ENSMUSP00000139937	TRANSLATION	protein_coding	stop	-	5	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034424	Gcsh	ENSMUST00000162548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034424	Gcsh	ENSMUST00000040484	ENSMUSP00000037131	TRANSLATION	protein_coding	-	CCDS22696.1	1	170	5	3.5	1.5	168.2	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000096295	Defa2	ENSMUST00000170275	ENSMUSP00000125888	TRANSLATION	protein_coding	-	CCDS59740.1	1	95	0	1	0.5	78.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079019	Insl3	ENSMUST00000034261	ENSMUSP00000034261	TRANSLATION	protein_coding	-	CCDS22404.1	1	122	0	1	0.5	42.4	0	2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000031647	Mfap3l	ENSMUST00000161702	ENSMUSP00000124330	TRANSLATION	protein_coding	-	CCDS22321.1	1	409	0	0.48	5.1	49.1	1	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000031647	Mfap3l	ENSMUST00000160719	ENSMUSP00000125139	TRANSLATION	protein_coding	-	CCDS22321.1	1	409	0	0.48	5.1	49.1	1	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000031647	Mfap3l	ENSMUST00000034066	ENSMUSP00000034066	TRANSLATION	protein_coding	-	CCDS22321.1	1	409	0	0.48	5.1	49.1	1	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000031647	Mfap3l	ENSMUST00000161421	ENSMUSP00000124136	TRANSLATION	protein_coding	-	CCDS80877.1	1	306	0	0	4.1	0	1	-4,-6	-	-	1.512	MINOR
ENSMUSG00000031521	Aga	ENSMUST00000033920	ENSMUSP00000033920	TRANSLATION	protein_coding	-	CCDS22304.1	1	346	10	8.63	3.9	285.4	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000031521	Aga	ENSMUST00000209811	ENSMUSP00000147487	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031521	Aga	ENSMUST00000211424	ENSMUSP00000148133	TRANSLATION	protein_coding	-	CCDS85539.1	1	336	9	8.3	1.7	247	0	3,-2	-	-	14.611	MINOR
ENSMUSG00000002949	Timm44	ENSMUST00000161143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002949	Timm44	ENSMUST00000160549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002949	Timm44	ENSMUST00000160371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002949	Timm44	ENSMUST00000148672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002949	Timm44	ENSMUST00000141195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002949	Timm44	ENSMUST00000147831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002949	Timm44	ENSMUST00000003029	ENSMUSP00000003029	TRANSLATION	protein_coding	-	CCDS22083.1	1	452	0	5.8	7.5	144.7	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000002949	Timm44	ENSMUST00000135755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002949	Timm44	ENSMUST00000149827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001911	Nfix	ENSMUST00000109764	ENSMUSP00000105386	TRANSLATION	protein_coding	-	CCDS40411.1	1	494	0	0	6.3	559.8	0	-4,-5	-	-	8.523	PRINCIPAL:1
ENSMUSG00000001911	Nfix	ENSMUST00000132236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001911	Nfix	ENSMUST00000099070	ENSMUSP00000096669	TRANSLATION	protein_coding	-	CCDS40413.1	1	441	0	0	7.3	458.2	0	-4,-5	-	-	3	MINOR
ENSMUSG00000001911	Nfix	ENSMUST00000126806	ENSMUSP00000115691	TRANSLATION	protein_coding	stop	-	5	488	0	0	0	545.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001911	Nfix	ENSMUST00000148644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001911	Nfix	ENSMUST00000076715	ENSMUSP00000076005	TRANSLATION	protein_coding	-	CCDS40412.1	1	400	0	0	2.7	302.6	0	-4,-5	-	-	0.81	MINOR
ENSMUSG00000001911	Nfix	ENSMUST00000109762	ENSMUSP00000105384	TRANSLATION	protein_coding	-	CCDS80907.1	1	391	0	0	0.5	297.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000001911	Nfix	ENSMUST00000148746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038225	Primpol	ENSMUST00000123328	ENSMUSP00000147684	TRANSLATION	nonsense_mediated_decay	start	-	5	38	0	1.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038225	Primpol	ENSMUST00000132472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038225	Primpol	ENSMUST00000210264	ENSMUSP00000148164	TRANSLATION	protein_coding	stop	-	2	30	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038225	Primpol	ENSMUST00000125319	ENSMUSP00000115987	TRANSLATION	protein_coding	stop	-	3	114	0	3.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038225	Primpol	ENSMUST00000136335	ENSMUSP00000147458	TRANSLATION	nonsense_mediated_decay	-	-	5	265	0	5.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038225	Primpol	ENSMUST00000211400	ENSMUSP00000147574	TRANSLATION	nonsense_mediated_decay	-	-	1	537	0	8.08	0.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038225	Primpol	ENSMUST00000209787	ENSMUSP00000148093	TRANSLATION	protein_coding	-	CCDS40334.1	5	537	0	8.08	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038225	Primpol	ENSMUST00000040468	ENSMUSP00000036119	TRANSLATION	protein_coding	-	CCDS40334.1	1	537	0	8.08	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000014846	Tppp3	ENSMUST00000014990	ENSMUSP00000014990	TRANSLATION	protein_coding	-	CCDS22602.1	1	176	0	3	13	221.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000014846	Tppp3	ENSMUST00000176419	ENSMUSP00000134807	TRANSLATION	protein_coding	-	CCDS22602.1	1	176	0	3	13	221.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000014846	Tppp3	ENSMUST00000177126	ENSMUSP00000135040	TRANSLATION	protein_coding	-	CCDS22602.1	3	176	0	3	13	221.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002948	Map2k7	ENSMUST00000110998	ENSMUSP00000106626	TRANSLATION	protein_coding	-	CCDS40209.1	1	419	20	9.13	10.8	192.4	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000002948	Map2k7	ENSMUST00000110999	ENSMUSP00000106627	TRANSLATION	protein_coding	-	CCDS80852.1	1	452	20	9.13	1.5	192.4	0	-4,-5	-	-	18.153	MINOR
ENSMUSG00000002948	Map2k7	ENSMUST00000129537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002948	Map2k7	ENSMUST00000129866	ENSMUSP00000146485	TRANSLATION	protein_coding	start	-	3	79	5	1.75	0	84.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002948	Map2k7	ENSMUST00000207247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002948	Map2k7	ENSMUST00000003027	ENSMUSP00000003027	TRANSLATION	protein_coding	-	CCDS40208.1	1	468	20	9.13	1.5	192.4	0	-4,-6	-	-	18.153	MINOR
ENSMUSG00000002948	Map2k7	ENSMUST00000110996	ENSMUSP00000106624	TRANSLATION	protein_coding	-	-	1	391	20	9.13	0	192.4	0	-4,-6	-	-	18	MINOR
ENSMUSG00000002948	Map2k7	ENSMUST00000062686	ENSMUSP00000054512	TRANSLATION	protein_coding	-	CCDS52474.1	1	435	20	9.13	10.8	192.4	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000002948	Map2k7	ENSMUST00000110994	ENSMUSP00000106622	TRANSLATION	protein_coding	-	CCDS80854.1	1	346	20	8.73	0.5	192.4	0	-4,-5	-	-	17.202	MINOR
ENSMUSG00000002948	Map2k7	ENSMUST00000110995	ENSMUSP00000106623	TRANSLATION	protein_coding	-	CCDS80853.1	1	379	20	8.73	0.5	192.4	0	-4,-5	-	-	17.202	MINOR
ENSMUSG00000031822	Gse1	ENSMUST00000180448	ENSMUSP00000137811	TRANSLATION	protein_coding	stop	-	3	729	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000031822	Gse1	ENSMUST00000147327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031822	Gse1	ENSMUST00000211997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031822	Gse1	ENSMUST00000034279	ENSMUSP00000034279	TRANSLATION	protein_coding	-	CCDS52687.1	1	1223	0	0	0.5	210	0	-4,-6	-	-	6	PRINCIPAL:4
ENSMUSG00000031822	Gse1	ENSMUST00000120493	ENSMUSP00000113577	TRANSLATION	protein_coding	-	CCDS52689.1	1	1210	0	0	0.5	210	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000031822	Gse1	ENSMUST00000118136	ENSMUSP00000112981	TRANSLATION	protein_coding	-	CCDS52688.1	1	1213	0	0	0.5	210	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000031822	Gse1	ENSMUST00000141113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038604	Ripor1	ENSMUST00000043531	ENSMUSP00000039966	TRANSLATION	protein_coding	-	CCDS52660.1	1	1223	0	1.6	0.5	556.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000053560	Ier2	ENSMUST00000060427	ENSMUSP00000060275	TRANSLATION	protein_coding	-	CCDS22474.1	-	221	0	0	2.7	65.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000002346	Slc25a42	ENSMUST00000063788	ENSMUSP00000065903	TRANSLATION	protein_coding	-	CCDS40370.1	5	318	17	3.565	7.5	232.6	2	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000002346	Slc25a42	ENSMUST00000150706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002346	Slc25a42	ENSMUST00000134596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002346	Slc25a42	ENSMUST00000110127	ENSMUSP00000105754	TRANSLATION	protein_coding	-	CCDS40370.1	5	318	17	3.565	7.5	232.6	2	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000002346	Slc25a42	ENSMUST00000139333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079157	Fam155a	ENSMUST00000207869	ENSMUSP00000146968	TRANSLATION	nonsense_mediated_decay	start	-	1	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079157	Fam155a	ENSMUST00000208855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079157	Fam155a	ENSMUST00000208171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079157	Fam155a	ENSMUST00000208933	ENSMUSP00000146609	TRANSLATION	protein_coding	-	CCDS85497.1	1	378	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000079157	Fam155a	ENSMUST00000110969	ENSMUSP00000106596	TRANSLATION	protein_coding	-	CCDS40216.1	1	467	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000079157	Fam155a	ENSMUST00000207297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053678	Defb40	ENSMUST00000066258	ENSMUSP00000066465	TRANSLATION	protein_coding	-	CCDS40246.1	1	73	0	0	1.5	43	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000060427	Zfp868	ENSMUST00000140522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060427	Zfp868	ENSMUST00000074982	ENSMUSP00000074510	TRANSLATION	protein_coding	-	CCDS22347.1	1	422	36	2.05	0.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060427	Zfp868	ENSMUST00000121886	ENSMUSP00000113952	TRANSLATION	protein_coding	-	CCDS22347.1	1	422	36	2.05	0.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060427	Zfp868	ENSMUST00000150118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031953	Tmem170	ENSMUST00000034431	ENSMUSP00000034431	TRANSLATION	protein_coding	-	CCDS22681.1	1	144	0	0	9.5	137.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031812	Map1lc3b	ENSMUST00000034270	ENSMUSP00000034270	TRANSLATION	protein_coding	-	CCDS22726.1	1	125	0	3.08	17.5	147.4	0	-4,-7	-	-	15.28	PRINCIPAL:1
ENSMUSG00000031812	Map1lc3b	ENSMUST00000180548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031812	Map1lc3b	ENSMUST00000181826	ENSMUSP00000148359	TRANSLATION	protein_coding	-	-	-	173	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031812	Map1lc3b	ENSMUST00000181948	ENSMUSP00000137754	TRANSLATION	protein_coding	-	-	2	160	0	3.44	0	120.6	0	-4,-7	-	-	10.392	MINOR
ENSMUSG00000031812	Map1lc3b	ENSMUST00000181521	ENSMUSP00000137996	TRANSLATION	protein_coding	-	-	3	66	0	1.33	0	81.4	0	-4,-2	-	-	3.822	MINOR
ENSMUSG00000033009	Ogfod1	ENSMUST00000060632	ENSMUSP00000051430	TRANSLATION	protein_coding	-	-	1	530	8	11.75	0	238.2	0	-4,-5	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000033009	Ogfod1	ENSMUST00000093301	ENSMUSP00000090991	TRANSLATION	protein_coding	-	CCDS52636.1	1	502	6	11.25	0.5	133.4	0	-4,-5	-	-	8.502	MINOR
ENSMUSG00000033009	Ogfod1	ENSMUST00000141636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033009	Ogfod1	ENSMUST00000172674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033009	Ogfod1	ENSMUST00000127634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033009	Ogfod1	ENSMUST00000109556	ENSMUSP00000105183	TRANSLATION	protein_coding	-	CCDS22535.2	1	545	8	12.25	2.7	238.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000033009	Ogfod1	ENSMUST00000145717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031652	N4bp1	ENSMUST00000210029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031652	N4bp1	ENSMUST00000209389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031652	N4bp1	ENSMUST00000034074	ENSMUSP00000034074	TRANSLATION	protein_coding	-	CCDS52625.1	1	893	0	3.5	1.5	183.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031738	Irx6	ENSMUST00000167261	ENSMUSP00000127446	TRANSLATION	protein_coding	-	CCDS80913.1	1	438	0	0.6	1.7	57.4	0	-3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000031738	Irx6	ENSMUST00000034185	ENSMUSP00000034185	TRANSLATION	protein_coding	-	CCDS40428.1	1	439	0	0.6	1.7	57.4	0	-3,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000031711	Zfp330	ENSMUST00000211462	ENSMUSP00000147955	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0	0	55.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031711	Zfp330	ENSMUST00000209601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031711	Zfp330	ENSMUST00000211451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031711	Zfp330	ENSMUST00000210958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031711	Zfp330	ENSMUST00000209587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031711	Zfp330	ENSMUST00000034147	ENSMUSP00000034147	TRANSLATION	protein_coding	-	CCDS22447.1	1	316	8	0	3.9	540.5	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000031711	Zfp330	ENSMUST00000209727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041438	Utp4	ENSMUST00000212718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041438	Utp4	ENSMUST00000047629	ENSMUSP00000048377	TRANSLATION	protein_coding	-	CCDS52664.1	1	686	0	5.89	7.5	25.3	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000041438	Utp4	ENSMUST00000212272	ENSMUSP00000148429	TRANSLATION	protein_coding	stop	-	2	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044743	Defb10	ENSMUST00000054162	ENSMUSP00000061533	TRANSLATION	protein_coding	-	CCDS40285.1	1	73	0	0	0.5	41.8	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039470	Zdhhc2	ENSMUST00000131672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039470	Zdhhc2	ENSMUST00000049389	ENSMUSP00000041727	TRANSLATION	protein_coding	-	CCDS22252.1	1	366	6	0	8.5	124.7	3	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039470	Zdhhc2	ENSMUST00000128166	ENSMUSP00000123070	TRANSLATION	protein_coding	-	CCDS22252.1	1	366	6	0	8.5	124.7	3	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039470	Zdhhc2	ENSMUST00000167766	ENSMUSP00000129996	TRANSLATION	protein_coding	-	CCDS22252.1	1	366	6	0	8.5	124.7	3	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039470	Zdhhc2	ENSMUST00000168799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039470	Zdhhc2	ENSMUST00000164934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007610	Gtpbp3	ENSMUST00000146551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007610	Gtpbp3	ENSMUST00000007754	ENSMUSP00000007754	TRANSLATION	protein_coding	-	CCDS40384.1	1	492	13	5.71	1.5	191.3	0	0,0	-	-	17.502	PRINCIPAL:2
ENSMUSG00000007610	Gtpbp3	ENSMUST00000124349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007610	Gtpbp3	ENSMUST00000150969	ENSMUSP00000114193	TRANSLATION	nonsense_mediated_decay	-	-	1	492	13	5.71	1.5	191.3	0	0,0	-	-	-1	MINOR
ENSMUSG00000007610	Gtpbp3	ENSMUST00000095259	ENSMUSP00000092892	TRANSLATION	nonsense_mediated_decay	-	-	1	241	0	2.35	0	122.2	0	0,0	-	-	-1	MINOR
ENSMUSG00000007610	Gtpbp3	ENSMUST00000168847	ENSMUSP00000126761	TRANSLATION	protein_coding	-	-	5	493	13	5.96	1.5	183.3	0	0,0	-	-	17.52	ALTERNATIVE:2
ENSMUSG00000007610	Gtpbp3	ENSMUST00000127741	ENSMUSP00000123082	TRANSLATION	nonsense_mediated_decay	-	-	1	228	0	2.35	0	122.2	0	0,0	-	-	-1	MINOR
ENSMUSG00000007610	Gtpbp3	ENSMUST00000132907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037921	Ddx60	ENSMUST00000154398	ENSMUSP00000122841	TRANSLATION	protein_coding	stop	-	5	573	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037921	Ddx60	ENSMUST00000136121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037921	Ddx60	ENSMUST00000153806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037921	Ddx60	ENSMUST00000070631	ENSMUSP00000070741	TRANSLATION	protein_coding	-	CCDS52556.2	5	1710	11	3	0.5	91.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000037921	Ddx60	ENSMUST00000156980	ENSMUSP00000120424	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037921	Ddx60	ENSMUST00000093485	ENSMUSP00000091197	TRANSLATION	protein_coding	-	-	5	1711	11	3	0	91.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000014786	Slc9a5	ENSMUST00000073149	ENSMUSP00000072893	TRANSLATION	protein_coding	-	CCDS40457.1	1	898	0	3.43	0.5	290.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000014786	Slc9a5	ENSMUST00000212772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037148	Arhgap10	ENSMUST00000076316	ENSMUSP00000075658	TRANSLATION	protein_coding	-	CCDS22425.1	1	786	0	13.23	5.1	505	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037148	Arhgap10	ENSMUST00000210519	ENSMUSP00000147493	TRANSLATION	protein_coding	-	-	1	764	0	12.48	0.5	488.4	0	-4,-5	-	-	9.504	MINOR
ENSMUSG00000037148	Arhgap10	ENSMUST00000210922	ENSMUSP00000147485	TRANSLATION	protein_coding	-	-	1	735	0	12.95	3.9	505	0	-4,-5	-	-	12.856	MINOR
ENSMUSG00000002396	Ocel1	ENSMUST00000110052	ENSMUSP00000105679	TRANSLATION	protein_coding	-	-	1	140	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000002396	Ocel1	ENSMUST00000002469	ENSMUSP00000002469	TRANSLATION	protein_coding	-	CCDS22391.1	1	219	0	1.84	0.5	89.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000002396	Ocel1	ENSMUST00000126049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002396	Ocel1	ENSMUST00000110051	ENSMUSP00000105678	TRANSLATION	protein_coding	-	CCDS80892.1	1	135	0	0	0.5	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000210153	ENSMUSP00000147670	TRANSLATION	protein_coding	stop	-	1	98	0	0	0	110.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000079195	ENSMUSP00000078190	TRANSLATION	protein_coding	-	CCDS52548.1	1	926	0	0	11.5	110.8	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000038143	Stox2	ENSMUST00000210030	ENSMUSP00000147281	TRANSLATION	protein_coding	-	CCDS40336.1	1	801	0	0	0.5	110.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000209337	ENSMUSP00000148231	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	56.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000181417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038143	Stox2	ENSMUST00000211882	ENSMUSP00000148776	TRANSLATION	protein_coding	-	-	5	927	0	0	0	110.8	0	-3,-6	-	-	6	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000209941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038143	Stox2	ENSMUST00000211737	ENSMUSP00000147477	TRANSLATION	protein_coding	-	CCDS85535.1	1	863	0	0	1.7	110.8	0	-4,-2	-	-	6.201	MINOR
ENSMUSG00000038143	Stox2	ENSMUST00000110367	ENSMUSP00000105996	TRANSLATION	protein_coding	-	CCDS40336.1	1	801	0	0	0.5	110.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000044676	Zfp612	ENSMUST00000058804	ENSMUSP00000062474	TRANSLATION	protein_coding	-	-	1	633	64	0.9	1.5	261.6	0	-4,-5	-	-	9.78	MINOR
ENSMUSG00000044676	Zfp612	ENSMUST00000212754	ENSMUSP00000148717	TRANSLATION	protein_coding	-	CCDS22660.1	1	672	64	1.9	1.5	346	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000044676	Zfp612	ENSMUST00000213084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031786	Drc7	ENSMUST00000212986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031786	Drc7	ENSMUST00000058479	ENSMUSP00000053972	TRANSLATION	protein_coding	-	CCDS40444.1	1	876	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031786	Drc7	ENSMUST00000212980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031727	Pmfbp1	ENSMUST00000212003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031727	Pmfbp1	ENSMUST00000034162	ENSMUSP00000034162	TRANSLATION	protein_coding	-	CCDS40468.1	1	1022	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000096265	4930467E23Rik	ENSMUST00000098909	ENSMUSP00000096508	TRANSLATION	protein_coding	-	CCDS52498.1	5	350	0	3.03	0.5	92.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031910	Has3	ENSMUST00000175987	ENSMUSP00000135596	TRANSLATION	protein_coding	-	-	5	258	12	0	0	0	2	3,-2	-	-	4.668	MINOR
ENSMUSG00000031910	Has3	ENSMUST00000176144	ENSMUSP00000135303	TRANSLATION	protein_coding	-	CCDS22640.1	1	554	14	0	7.5	48.3	6	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031910	Has3	ENSMUST00000034385	ENSMUSP00000034385	TRANSLATION	protein_coding	-	CCDS22640.1	1	554	14	0	7.5	48.3	6	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000034829	Nxnl1	ENSMUST00000048243	ENSMUSP00000039294	TRANSLATION	protein_coding	-	CCDS40385.1	2	217	0	0.62	1.5	79.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034829	Nxnl1	ENSMUST00000163659	ENSMUSP00000127094	TRANSLATION	protein_coding	-	CCDS40385.1	2	217	0	0.62	1.5	79.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031568	Rwdd4a	ENSMUST00000176379	ENSMUSP00000135059	TRANSLATION	protein_coding	stop	-	5	132	0	1.3176	0	57.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031568	Rwdd4a	ENSMUST00000033973	ENSMUSP00000033973	TRANSLATION	protein_coding	-	CCDS22297.1	2	188	0	1.3176	12.8	57.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031568	Rwdd4a	ENSMUST00000183107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031568	Rwdd4a	ENSMUST00000177215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031568	Rwdd4a	ENSMUST00000175692	ENSMUSP00000134999	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0.648	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037852	Cpe	ENSMUST00000048967	ENSMUSP00000048555	TRANSLATION	protein_coding	-	CCDS22327.1	1	476	8	7.2	6.3	332.6	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000037852	Cpe	ENSMUST00000211312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037852	Cpe	ENSMUST00000210783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037852	Cpe	ENSMUST00000210680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038894	Irs2	ENSMUST00000040514	ENSMUSP00000038514	TRANSLATION	protein_coding	-	CCDS52477.1	1	1321	0	0.2	0.5	132.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031828	Klhl36	ENSMUST00000034287	ENSMUSP00000034287	TRANSLATION	protein_coding	-	CCDS22713.1	1	613	0	2.46	1.5	294.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031828	Klhl36	ENSMUST00000212970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031828	Klhl36	ENSMUST00000212636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011837	Snapc2	ENSMUST00000208110	ENSMUSP00000146378	TRANSLATION	protein_coding	start	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011837	Snapc2	ENSMUST00000208316	ENSMUSP00000146771	TRANSLATION	protein_coding	-	-	1	249	0	0	0	349.4	0	-4,0	-	-	0	MINOR
ENSMUSG00000011837	Snapc2	ENSMUST00000208459	ENSMUSP00000146560	TRANSLATION	protein_coding	stop	-	3	222	0	0	0	269.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000011837	Snapc2	ENSMUST00000011981	ENSMUSP00000011981	TRANSLATION	protein_coding	-	CCDS22081.1	1	359	0	0	1.5	468	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000039431	Mtmr7	ENSMUST00000174537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039431	Mtmr7	ENSMUST00000048898	ENSMUSP00000043851	TRANSLATION	protein_coding	-	CCDS40324.1	1	660	7	11.31	8.3	478.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000039431	Mtmr7	ENSMUST00000173957	ENSMUSP00000134020	TRANSLATION	protein_coding	stop	-	5	260	0	6.16	0	206.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039431	Mtmr7	ENSMUST00000174205	ENSMUSP00000134731	TRANSLATION	protein_coding	-	-	1	498	7	10.71	0	478.5	0	-4,-6	-	-	16.8	MINOR
ENSMUSG00000039431	Mtmr7	ENSMUST00000048890	ENSMUSP00000043367	TRANSLATION	nonsense_mediated_decay	-	-	1	467	7	10.51	0	478.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039431	Mtmr7	ENSMUST00000173487	ENSMUSP00000134281	TRANSLATION	protein_coding	start	-	5	424	7	7.95	0	417.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031445	Proz	ENSMUST00000210050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031445	Proz	ENSMUST00000033822	ENSMUSP00000033822	TRANSLATION	protein_coding	-	CCDS22105.1	1	399	20	5.505	0.5	217.2	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000031445	Proz	ENSMUST00000211363	ENSMUSP00000147733	TRANSLATION	protein_coding	-	-	1	241	20	4.705	0.5	174.6	0	2,-3	-	-	13.842	MINOR
ENSMUSG00000031445	Proz	ENSMUST00000211453	ENSMUSP00000147328	TRANSLATION	nonsense_mediated_decay	-	-	1	98	10	1	0	57.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000039067	Psmd7	ENSMUST00000213080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039067	Psmd7	ENSMUST00000044106	ENSMUSP00000041968	TRANSLATION	protein_coding	-	CCDS22650.1	1	321	0	6.5	0.5	238.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034796	Cpne7	ENSMUST00000134235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034796	Cpne7	ENSMUST00000037900	ENSMUSP00000042159	TRANSLATION	protein_coding	-	CCDS22748.1	1	557	5	2.25	1.5	410.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000034796	Cpne7	ENSMUST00000127431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034796	Cpne7	ENSMUST00000123191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034796	Cpne7	ENSMUST00000131659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095941	Tle7	ENSMUST00000213641	ENSMUSP00000149275	TRANSLATION	protein_coding	-	-	5	430	0	4.76	1.5	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000095941	Tle7	ENSMUST00000219454	ENSMUSP00000151787	TRANSLATION	protein_coding	-	-	5	437	0	4.76	1	0	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000095941	Tle7	ENSMUST00000178785	ENSMUSP00000136968	TRANSLATION	protein_coding	start	-	5	311	0	4.76	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031701	Dnaja2	ENSMUST00000211630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031701	Dnaja2	ENSMUST00000034138	ENSMUSP00000034138	TRANSLATION	protein_coding	-	CCDS22500.1	1	412	8	6.97	17.5	301.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031471	Defb8	ENSMUST00000033854	ENSMUSP00000033854	TRANSLATION	protein_coding	-	CCDS40259.1	1	60	0	1	1.5	35.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058748	Zfp958	ENSMUST00000073201	ENSMUSP00000072937	TRANSLATION	protein_coding	start	-	5	466	52	2.2	0.5	290.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058748	Zfp958	ENSMUST00000202692	ENSMUSP00000143842	TRANSLATION	protein_coding	-	CCDS80856.1	1	467	52	2.2	0.5	290.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031750	Il34	ENSMUST00000154803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031750	Il34	ENSMUST00000148732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031750	Il34	ENSMUST00000076846	ENSMUSP00000076120	TRANSLATION	protein_coding	-	CCDS52669.1	1	235	0	4.35	3.9	254.1	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000031750	Il34	ENSMUST00000137362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031750	Il34	ENSMUST00000150680	ENSMUSP00000114398	TRANSLATION	protein_coding	-	CCDS52670.1	1	219	0	3.15	0.5	175.2	0	4,-1	-	-	4.866	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000186384	ENSMUSP00000140703	TRANSLATION	nonsense_mediated_decay	-	-	5	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000191030	ENSMUSP00000139569	TRANSLATION	nonsense_mediated_decay	-	-	2	504	8	6.692	0.5	129.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000190222	ENSMUSP00000139634	TRANSLATION	nonsense_mediated_decay	-	-	1	425	0	4.83	0	85.8	0	-1,1	-	-	-1	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000039597	ENSMUSP00000046546	TRANSLATION	protein_coding	-	-	5	534	8	6.972	0	129.4	0	-4,-5	-	-	18	PRINCIPAL:5
ENSMUSG00000033633	Clec18a	ENSMUST00000190778	ENSMUSP00000139789	TRANSLATION	nonsense_mediated_decay	-	-	2	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000191469	ENSMUSP00000139515	TRANSLATION	nonsense_mediated_decay	-	-	2	534	8	6.972	0	129.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033633	Clec18a	ENSMUST00000188466	ENSMUSP00000141073	TRANSLATION	protein_coding	-	-	5	473	8	6.692	0	129.4	0	-1,1	-	-	17.442	ALTERNATIVE:2
ENSMUSG00000031906	Smpd3	ENSMUST00000067512	ENSMUSP00000069255	TRANSLATION	protein_coding	-	CCDS22634.1	1	655	6	0.11	7.5	0	0	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000031906	Smpd3	ENSMUST00000212896	ENSMUSP00000148282	TRANSLATION	protein_coding	-	CCDS22634.1	1	655	6	0.11	7.5	0	0	-2,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000061577	Adgrg5	ENSMUST00000142991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061577	Adgrg5	ENSMUST00000128308	ENSMUSP00000120217	TRANSLATION	nonsense_mediated_decay	-	-	1	147	0	0.75	0	0	1	1,-3	-	-	-1	MINOR
ENSMUSG00000061577	Adgrg5	ENSMUST00000166802	ENSMUSP00000132628	TRANSLATION	protein_coding	-	CCDS52637.1	1	524	0	4.2286	1.5	161.5	9	1,-3	-	-	11.04	ALTERNATIVE:2
ENSMUSG00000061577	Adgrg5	ENSMUST00000153448	ENSMUSP00000122780	TRANSLATION	protein_coding	stop	-	5	106	0	0.4086	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000061577	Adgrg5	ENSMUST00000074570	ENSMUSP00000074155	TRANSLATION	protein_coding	-	CCDS22552.1	1	523	0	4.7086	1.5	161.5	9	1,-3	-	-	12	PRINCIPAL:3
ENSMUSG00000094662	Defa36	ENSMUST00000095424	ENSMUSP00000093074	TRANSLATION	protein_coding	-	CCDS57612.1	1	93	0	0	0.5	109.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000118541	AC132407.1	ENSMUST00000239000	ENSMUSP00000158957	TRANSLATION	protein_coding	-	-	-	61	0	0	0	0	0	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000070002	Ell	ENSMUST00000210155	ENSMUSP00000147325	TRANSLATION	protein_coding	stop	-	5	52	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070002	Ell	ENSMUST00000093454	ENSMUSP00000091163	TRANSLATION	protein_coding	-	CCDS22372.1	1	602	0	5.1	1.5	478.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000048827	Pkd1l3	ENSMUST00000212609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048827	Pkd1l3	ENSMUST00000212537	ENSMUSP00000148592	TRANSLATION	protein_coding	-	CCDS85608.1	1	2191	0	5.34	0.5	395.7	14	0,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048827	Pkd1l3	ENSMUST00000057344	ENSMUSP00000051512	TRANSLATION	protein_coding	-	CCDS22654.1	1	2151	0	5.34	0.5	395.7	14	0,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000048827	Pkd1l3	ENSMUST00000212545	ENSMUSP00000148503	TRANSLATION	protein_coding	start	-	1	816	0	3.6	0	285.4	12	-4,-5	-	-	-1	MINOR
ENSMUSG00000048827	Pkd1l3	ENSMUST00000213034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048827	Pkd1l3	ENSMUST00000109242	ENSMUSP00000104865	TRANSLATION	protein_coding	-	CCDS40472.1	1	2201	0	5.34	0.5	395.7	14	0,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000056820	Tsnax	ENSMUST00000075896	ENSMUSP00000075290	TRANSLATION	protein_coding	-	CCDS22778.1	1	290	0	5.33	7.5	210	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000056820	Tsnax	ENSMUST00000212603	ENSMUSP00000148470	TRANSLATION	protein_coding	-	-	1	168	0	4.33	0	101.9	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000001672	Marveld3	ENSMUST00000001722	ENSMUSP00000001722	TRANSLATION	protein_coding	-	CCDS22656.1	1	385	0	0	1.5	0	4	-4,-5	-	-	0	MINOR
ENSMUSG00000001672	Marveld3	ENSMUST00000051430	ENSMUSP00000052309	TRANSLATION	protein_coding	-	CCDS22657.1	1	376	0	0	1.5	53	3	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000001672	Marveld3	ENSMUST00000155052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046723	Adam24	ENSMUST00000051614	ENSMUSP00000050727	TRANSLATION	protein_coding	-	CCDS22255.1	1	761	16	0.32	0.5	374.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000003484	Cyp4f18	ENSMUST00000003574	ENSMUSP00000003574	TRANSLATION	protein_coding	-	CCDS22406.1	1	524	30	9.085	4.1	437.6	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000003484	Cyp4f18	ENSMUST00000125448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003484	Cyp4f18	ENSMUST00000141975	ENSMUSP00000148315	TRANSLATION	protein_coding	start	-	3	175	17	4.025	0	191.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000212875	ENSMUSP00000148351	TRANSLATION	protein_coding	stop	-	2	149	0	0	0	113	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000212673	ENSMUSP00000148792	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	61.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000212757	ENSMUSP00000148635	TRANSLATION	protein_coding	stop	-	2	176	0	0	0	115.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000211948	ENSMUSP00000148686	TRANSLATION	protein_coding	-	CCDS52577.1	1	1305	19	8.8	1.5	662.3	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000031833	Mast3	ENSMUST00000212001	ENSMUSP00000148817	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000166004	ENSMUSP00000128703	TRANSLATION	protein_coding	-	-	5	1321	19	8.8	1.5	662.3	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000031833	Mast3	ENSMUST00000212038	ENSMUSP00000148451	TRANSLATION	protein_coding	stop	-	2	135	0	0	0	92.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000211841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031833	Mast3	ENSMUST00000212551	ENSMUSP00000148291	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	51	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000212140	ENSMUSP00000148389	TRANSLATION	protein_coding	start	-	5	392	0	2.8	0	38.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031833	Mast3	ENSMUST00000212172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031974	Abcb10	ENSMUST00000075578	ENSMUSP00000075011	TRANSLATION	protein_coding	-	CCDS22766.1	1	715	12	10.95	1.5	319.3	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000055932	Fto	ENSMUST00000136802	ENSMUSP00000147603	TRANSLATION	protein_coding	-	-	1	413	3	6.35	0	519.9	0	-4,-5	-	-	5.37	MINOR
ENSMUSG00000055932	Fto	ENSMUST00000166548	ENSMUSP00000127680	TRANSLATION	protein_coding	stop	-	5	270	3	3.35	0	269.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055932	Fto	ENSMUST00000149913	ENSMUSP00000123142	TRANSLATION	protein_coding	stop	-	3	149	0	1.6	0	126.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000055932	Fto	ENSMUST00000125471	ENSMUSP00000147563	TRANSLATION	protein_coding	-	-	1	316	2	3.6	0	341.6	0	-4,-5	-	-	2.001	MINOR
ENSMUSG00000055932	Fto	ENSMUST00000069718	ENSMUSP00000068380	TRANSLATION	protein_coding	-	CCDS22521.1	1	502	3	8.35	6.3	613.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000055932	Fto	ENSMUST00000140276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055932	Fto	ENSMUST00000128081	ENSMUSP00000147548	TRANSLATION	protein_coding	-	-	1	481	3	7.35	0	557.9	0	-4,-5	-	-	9.654	MINOR
ENSMUSG00000074444	Defa30	ENSMUST00000098898	ENSMUSP00000096497	TRANSLATION	protein_coding	-	CCDS52504.1	1	93	0	0	1.5	120.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000007594	Hapln4	ENSMUST00000212006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007594	Hapln4	ENSMUST00000213092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007594	Hapln4	ENSMUST00000007738	ENSMUSP00000007738	TRANSLATION	protein_coding	-	CCDS40365.1	1	400	0	0.98	6.3	228.9	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000043068	Fam89a	ENSMUST00000055257	ENSMUSP00000058156	TRANSLATION	protein_coding	-	CCDS40516.1	1	175	0	0	2.7	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000061313	Ddhd2	ENSMUST00000211751	ENSMUSP00000147702	TRANSLATION	protein_coding	start	-	2	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061313	Ddhd2	ENSMUST00000209419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061313	Ddhd2	ENSMUST00000033975	ENSMUSP00000033975	TRANSLATION	protein_coding	-	CCDS52529.1	1	699	0	2.12	1.5	255.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061313	Ddhd2	ENSMUST00000210888	ENSMUSP00000148084	TRANSLATION	protein_coding	start/stop	-	3	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061313	Ddhd2	ENSMUST00000211688	ENSMUSP00000147859	TRANSLATION	protein_coding	-	-	1	730	0	2	0	183.7	0	-4,0	-	-	7.374	MINOR
ENSMUSG00000061313	Ddhd2	ENSMUST00000210777	ENSMUSP00000148250	TRANSLATION	protein_coding	start	-	5	84	0	0	0	65.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061313	Ddhd2	ENSMUST00000211009	ENSMUSP00000147769	TRANSLATION	nonsense_mediated_decay	-	-	1	358	0	0	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015013	Trappc2l	ENSMUST00000211904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015013	Trappc2l	ENSMUST00000212477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015013	Trappc2l	ENSMUST00000015157	ENSMUSP00000015157	TRANSLATION	protein_coding	-	CCDS22742.1	1	139	0	1.41	18.3	120.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031879	Ciao2b	ENSMUST00000093234	ENSMUSP00000090921	TRANSLATION	protein_coding	-	-	5	136	0	0.525	0	24.5	0	-4,-5	-	-	3.498	MINOR
ENSMUSG00000031879	Ciao2b	ENSMUST00000164884	ENSMUSP00000132725	TRANSLATION	protein_coding	-	CCDS52649.1	1	163	0	3.005	4.9	59.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000031879	Ciao2b	ENSMUST00000163140	ENSMUSP00000148786	TRANSLATION	nonsense_mediated_decay	-	-	2	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047866	Lonp2	ENSMUST00000122188	ENSMUSP00000113834	TRANSLATION	protein_coding	-	-	2	710	14	9.11	0	130.2	0	-4,-7	-	-	13.932	MINOR
ENSMUSG00000047866	Lonp2	ENSMUST00000163987	ENSMUSP00000127938	TRANSLATION	protein_coding	-	CCDS52624.1	1	432	4	7	0.5	33.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000047866	Lonp2	ENSMUST00000124911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047866	Lonp2	ENSMUST00000121673	ENSMUSP00000113381	TRANSLATION	protein_coding	-	CCDS52624.1	5	432	4	7	0.5	33.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000047866	Lonp2	ENSMUST00000155433	ENSMUSP00000118737	TRANSLATION	nonsense_mediated_decay	-	-	5	659	14	7.51	0	158	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047866	Lonp2	ENSMUST00000155501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047866	Lonp2	ENSMUST00000034141	ENSMUSP00000034141	TRANSLATION	protein_coding	-	CCDS22503.1	1	852	14	10.31	7.5	158	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000048644	Ctxn1	ENSMUST00000053252	ENSMUSP00000057115	TRANSLATION	protein_coding	-	CCDS40211.1	1	82	0	0	11.5	137.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031552	Adam18	ENSMUST00000138232	ENSMUSP00000148259	TRANSLATION	protein_coding	start	-	3	66	0	0.48	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031552	Adam18	ENSMUST00000173833	ENSMUSP00000133378	TRANSLATION	nonsense_mediated_decay	-	-	1	634	12	6.91	1	425.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000031552	Adam18	ENSMUST00000033957	ENSMUSP00000033957	TRANSLATION	protein_coding	-	CCDS22195.1	1	719	12	7.21	1.5	425.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037725	Ckap2	ENSMUST00000046916	ENSMUSP00000039518	TRANSLATION	protein_coding	-	CCDS22170.1	1	664	0	0	0.5	548.4	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000037725	Ckap2	ENSMUST00000211629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037725	Ckap2	ENSMUST00000211045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000082976	Gm15056	ENSMUST00000167686	ENSMUSP00000131853	TRANSLATION	protein_coding	-	CCDS52500.1	5	88	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000082976	Gm15056	ENSMUST00000122025	ENSMUSP00000119300	TRANSLATION	protein_coding	-	-	5	85	0	0	1.5	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000031755	Bbs2	ENSMUST00000034206	ENSMUSP00000034206	TRANSLATION	protein_coding	-	CCDS40434.1	1	721	9	0	9.6	923.2	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000031755	Bbs2	ENSMUST00000172347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031755	Bbs2	ENSMUST00000170208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031532	Saraf	ENSMUST00000211637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031532	Saraf	ENSMUST00000033933	ENSMUSP00000033933	TRANSLATION	protein_coding	-	-	1	334	0	0	1	318.5	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000031532	Saraf	ENSMUST00000211664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031532	Saraf	ENSMUST00000209470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031532	Saraf	ENSMUST00000239436	ENSMUSP00000159294	TRANSLATION	protein_coding	-	CCDS22240.1	-	363	0	0	0.5	318.5	0	0,4	-	-	6	PRINCIPAL:2
ENSMUSG00000003848	Nob1	ENSMUST00000163757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003848	Nob1	ENSMUST00000170796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003848	Nob1	ENSMUST00000163973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003848	Nob1	ENSMUST00000165266	ENSMUSP00000129298	TRANSLATION	nonsense_mediated_decay	start	-	3	62	0	0.4	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003848	Nob1	ENSMUST00000169311	ENSMUSP00000126868	TRANSLATION	nonsense_mediated_decay	-	-	5	159	0	1.35	0	117.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003848	Nob1	ENSMUST00000076585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003848	Nob1	ENSMUST00000003946	ENSMUSP00000003946	TRANSLATION	protein_coding	-	CCDS22649.1	1	403	4	3.85	0.5	295.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003848	Nob1	ENSMUST00000109273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031732	Phlpp2	ENSMUST00000154262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031732	Phlpp2	ENSMUST00000179721	ENSMUSP00000136166	TRANSLATION	protein_coding	-	CCDS57644.1	1	1355	0	8.3	3.9	209.9	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000031732	Phlpp2	ENSMUST00000034175	ENSMUSP00000034175	TRANSLATION	protein_coding	-	-	1	1320	0	8.3	3.6	209.9	0	-4,-7	-	-	12.897	ALTERNATIVE:2
ENSMUSG00000031753	Cog4	ENSMUST00000173794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031753	Cog4	ENSMUST00000173501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031753	Cog4	ENSMUST00000172497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031753	Cog4	ENSMUST00000172542	ENSMUSP00000133283	TRANSLATION	nonsense_mediated_decay	-	-	5	157	0	0	0	152.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000172668	ENSMUSP00000134252	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000165867	ENSMUSP00000128518	TRANSLATION	protein_coding	-	CCDS80931.1	1	712	0	7.5	1.7	316.6	0	-4,-5	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000031753	Cog4	ENSMUST00000172897	ENSMUSP00000133583	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000174679	ENSMUSP00000133458	TRANSLATION	protein_coding	start/stop	-	3	180	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000174398	ENSMUSP00000133297	TRANSLATION	protein_coding	start	-	5	763	0	6.75	0	316.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000174165	ENSMUSP00000134306	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000034203	ENSMUSP00000034203	TRANSLATION	protein_coding	-	CCDS40477.1	1	785	0	7.5	3.9	316.6	0	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000031753	Cog4	ENSMUST00000174723	ENSMUSP00000133471	TRANSLATION	nonsense_mediated_decay	-	-	5	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031753	Cog4	ENSMUST00000174800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031753	Cog4	ENSMUST00000174702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031712	Il15	ENSMUST00000209363	ENSMUSP00000147848	TRANSLATION	protein_coding	-	CCDS40401.1	1	162	0	3.25	2.7	168.3	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031712	Il15	ENSMUST00000210885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031712	Il15	ENSMUST00000211282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031712	Il15	ENSMUST00000209687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031712	Il15	ENSMUST00000211565	ENSMUSP00000147319	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000031712	Il15	ENSMUST00000210094	ENSMUSP00000147312	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000031712	Il15	ENSMUST00000034148	ENSMUSP00000034148	TRANSLATION	protein_coding	-	CCDS40401.1	1	162	0	3.25	2.7	168.3	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031712	Il15	ENSMUST00000209573	ENSMUSP00000148256	TRANSLATION	protein_coding	-	CCDS40401.1	5	162	0	3.25	2.7	168.3	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031712	Il15	ENSMUST00000210472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031712	Il15	ENSMUST00000211722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001472	Tcf25	ENSMUST00000212470	ENSMUSP00000148344	TRANSLATION	protein_coding	-	CCDS85631.1	1	600	0	0	0.5	394.1	0	-4,-2	-	-	6	MINOR
ENSMUSG00000001472	Tcf25	ENSMUST00000212571	ENSMUSP00000148531	TRANSLATION	protein_coding	-	CCDS85630.1	1	625	0	0	2.7	394.1	0	-4,-2	-	-	6.642	MINOR
ENSMUSG00000001472	Tcf25	ENSMUST00000211964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001472	Tcf25	ENSMUST00000057934	ENSMUSP00000056485	TRANSLATION	protein_coding	-	CCDS22755.1	1	676	0	0	6.3	394.1	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000001472	Tcf25	ENSMUST00000212741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001472	Tcf25	ENSMUST00000211932	ENSMUSP00000148676	TRANSLATION	protein_coding	-	-	1	626	0	0	2.7	394.1	0	-4,-2	-	-	6.642	MINOR
ENSMUSG00000001472	Tcf25	ENSMUST00000212569	ENSMUSP00000148454	TRANSLATION	protein_coding	stop	-	1	651	0	0	1.5	394.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001472	Tcf25	ENSMUST00000212498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001472	Tcf25	ENSMUST00000212996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001472	Tcf25	ENSMUST00000108840	ENSMUSP00000104468	TRANSLATION	protein_coding	-	CCDS52700.1	1	626	0	0	2.7	394.1	0	-4,-2	-	-	6.642	MINOR
ENSMUSG00000001472	Tcf25	ENSMUST00000212880	ENSMUSP00000148504	TRANSLATION	protein_coding	-	-	1	110	0	0	0	43.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000060924	Csmd1	ENSMUST00000138348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060924	Csmd1	ENSMUST00000133933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060924	Csmd1	ENSMUST00000137947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060924	Csmd1	ENSMUST00000131778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060924	Csmd1	ENSMUST00000082104	ENSMUSP00000080751	TRANSLATION	protein_coding	-	CCDS40244.1	1	3564	36	24.99	2.7	1998.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060924	Csmd1	ENSMUST00000125551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060924	Csmd1	ENSMUST00000122983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055681	Cope	ENSMUST00000066469	ENSMUSP00000071078	TRANSLATION	protein_coding	-	CCDS22365.1	1	308	0	8.25	7.5	437.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000055681	Cope	ENSMUST00000168018	ENSMUSP00000130416	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	1.75	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055681	Cope	ENSMUST00000134822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055681	Cope	ENSMUST00000167850	ENSMUSP00000132976	TRANSLATION	protein_coding	start	-	2	116	0	3	0	121	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055681	Cope	ENSMUST00000150968	ENSMUSP00000119055	TRANSLATION	protein_coding	stop	-	3	227	0	5.75	0	278.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055681	Cope	ENSMUST00000140363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055681	Cope	ENSMUST00000128003	ENSMUSP00000122888	TRANSLATION	protein_coding	start	-	3	234	0	5.25	0	308	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055681	Cope	ENSMUST00000128822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039539	Sgcz	ENSMUST00000118896	ENSMUSP00000113912	TRANSLATION	protein_coding	-	CCDS22251.2	1	311	0	0	6.3	296	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000039539	Sgcz	ENSMUST00000135764	ENSMUSP00000117250	TRANSLATION	nonsense_mediated_decay	-	-	5	209	0	0	0	171.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000000739	Sult5a1	ENSMUST00000137998	ENSMUSP00000122415	TRANSLATION	protein_coding	stop	-	3	218	10	4.43	0	187.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000739	Sult5a1	ENSMUST00000146007	ENSMUSP00000116815	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000739	Sult5a1	ENSMUST00000000755	ENSMUSP00000000755	TRANSLATION	protein_coding	-	CCDS22749.1	1	291	19	6.43	0.5	255.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000739	Sult5a1	ENSMUST00000122819	ENSMUSP00000123501	TRANSLATION	nonsense_mediated_decay	-	-	2	171	9	2.831	0	118.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000739	Sult5a1	ENSMUST00000126951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000739	Sult5a1	ENSMUST00000152722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004568	Arhgef18	ENSMUST00000208363	ENSMUSP00000146396	TRANSLATION	nonsense_mediated_decay	-	-	2	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004568	Arhgef18	ENSMUST00000145394	ENSMUSP00000118410	TRANSLATION	protein_coding	stop	-	3	107	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004568	Arhgef18	ENSMUST00000130587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004568	Arhgef18	ENSMUST00000207059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004568	Arhgef18	ENSMUST00000131773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004568	Arhgef18	ENSMUST00000004684	ENSMUSP00000004684	TRANSLATION	protein_coding	-	CCDS22060.1	1	1021	0	7.35	0.5	141.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000004568	Arhgef18	ENSMUST00000239102	ENSMUSP00000158969	TRANSLATION	protein_coding	-	-	-	1405	0	7.35	0	141.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004568	Arhgef18	ENSMUST00000156085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004568	Arhgef18	ENSMUST00000145360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004568	Arhgef18	ENSMUST00000238786	ENSMUSP00000158946	TRANSLATION	protein_coding	-	-	-	1126	0	7.35	0	141.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000004568	Arhgef18	ENSMUST00000238813	ENSMUSP00000159070	TRANSLATION	protein_coding	-	-	-	508	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000004568	Arhgef18	ENSMUST00000098966	ENSMUSP00000096566	TRANSLATION	protein_coding	-	CCDS52466.1	5	484	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000004568	Arhgef18	ENSMUST00000208845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035569	Ankrd11	ENSMUST00000174833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035569	Ankrd11	ENSMUST00000212050	ENSMUSP00000148645	TRANSLATION	protein_coding	start	-	1	134	0	2.115	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035569	Ankrd11	ENSMUST00000212337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035569	Ankrd11	ENSMUST00000098333	ENSMUSP00000095938	TRANSLATION	protein_coding	-	-	5	2664	0	2.6	0	73.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035569	Ankrd11	ENSMUST00000172906	ENSMUSP00000133977	TRANSLATION	nonsense_mediated_decay	-	-	1	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035569	Ankrd11	ENSMUST00000212937	ENSMUSP00000148523	TRANSLATION	protein_coding	-	-	1	121	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000035569	Ankrd11	ENSMUST00000098334	ENSMUSP00000095939	TRANSLATION	protein_coding	-	CCDS40507.2	5	2643	0	2.6	0.5	73.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000079033	Mef2b	ENSMUST00000110140	ENSMUSP00000105767	TRANSLATION	protein_coding	-	-	1	232	0	1.9	0	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000079033	Mef2b	ENSMUST00000110141	ENSMUSP00000105768	TRANSLATION	protein_coding	-	-	1	242	0	1.9	0	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000079033	Mef2b	ENSMUST00000163756	ENSMUSP00000132314	TRANSLATION	protein_coding	-	CCDS22361.1	2	349	0	1.9	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000079033	Mef2b	ENSMUST00000110143	ENSMUSP00000105770	TRANSLATION	protein_coding	-	CCDS40368.1	1	339	0	1.9	0.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000079033	Mef2b	ENSMUST00000110146	ENSMUSP00000105773	TRANSLATION	protein_coding	-	CCDS22361.1	1	349	0	1.9	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000061104	Sap18b	ENSMUST00000074053	ENSMUSP00000073697	TRANSLATION	protein_coding	-	CCDS52642.1	-	172	0	1	8.8	146.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000056019	Zfp709	ENSMUST00000188374	ENSMUSP00000141000	TRANSLATION	protein_coding	-	-	1	64	0	1.15	1	75.7	0	-4,-6	-	-	5.112	MINOR
ENSMUSG00000056019	Zfp709	ENSMUST00000188685	ENSMUSP00000140285	TRANSLATION	protein_coding	-	CCDS80897.1	1	727	72	1.35	0.5	344.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056019	Zfp709	ENSMUST00000034259	ENSMUSP00000034259	TRANSLATION	protein_coding	start	-	5	726	72	1.35	0.5	344.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056019	Zfp709	ENSMUST00000203585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058618	Defa39	ENSMUST00000071886	ENSMUSP00000071783	TRANSLATION	protein_coding	-	CCDS22156.1	1	116	6	0	0.5	72.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031441	Atp11a	ENSMUST00000136918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031441	Atp11a	ENSMUST00000133338	ENSMUSP00000120625	TRANSLATION	nonsense_mediated_decay	-	-	1	291	1	0	0	109.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000031441	Atp11a	ENSMUST00000091237	ENSMUSP00000088779	TRANSLATION	protein_coding	-	CCDS40223.1	1	1187	6	0	1.5	419.6	19	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000031441	Atp11a	ENSMUST00000125031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031441	Atp11a	ENSMUST00000033818	ENSMUSP00000033818	TRANSLATION	protein_coding	-	CCDS80858.1	1	1142	6	0	0.5	419.6	19	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031441	Atp11a	ENSMUST00000152273	ENSMUSP00000121989	TRANSLATION	protein_coding	start	-	3	163	0	0	0	150.3	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000031441	Atp11a	ENSMUST00000132974	ENSMUSP00000117091	TRANSLATION	protein_coding	start	-	1	590	2	0	0	287.2	14	-4,-6	-	-	-1	MINOR
ENSMUSG00000031441	Atp11a	ENSMUST00000143359	ENSMUSP00000114312	TRANSLATION	protein_coding	start	-	3	131	0	0	0	65.1	6	0,-4	-	-	-1	MINOR
ENSMUSG00000031441	Atp11a	ENSMUST00000127197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031441	Atp11a	ENSMUST00000131804	ENSMUSP00000121567	TRANSLATION	protein_coding	start	-	5	89	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000031441	Atp11a	ENSMUST00000139545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023336	Wfdc1	ENSMUST00000212901	ENSMUSP00000148437	TRANSLATION	protein_coding	-	-	1	201	0	0	0	33.4	0	3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000023336	Wfdc1	ENSMUST00000024107	ENSMUSP00000024107	TRANSLATION	protein_coding	-	CCDS22711.1	1	211	0	0	1.5	33.4	0	3,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000031955	Bcar1	ENSMUST00000166232	ENSMUSP00000129584	TRANSLATION	protein_coding	-	CCDS52675.1	1	874	0	3.8	1.5	466.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000031955	Bcar1	ENSMUST00000212349	ENSMUSP00000148364	TRANSLATION	protein_coding	-	CCDS85616.1	1	874	0	3.8	1.5	466.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031955	Bcar1	ENSMUST00000212147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003657	Calb2	ENSMUST00000212297	ENSMUSP00000148680	TRANSLATION	protein_coding	-	-	1	242	26	6.716	0	105.8	0	-4,-6	-	-	16.53	MINOR
ENSMUSG00000003657	Calb2	ENSMUST00000003754	ENSMUSP00000003754	TRANSLATION	protein_coding	-	CCDS22661.1	1	271	26	7.45	10.3	105.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000074240	Cib3	ENSMUST00000211946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074240	Cib3	ENSMUST00000238973	ENSMUSP00000159168	TRANSLATION	protein_coding	-	-	-	187	15	3.694	14.8	39.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000074240	Cib3	ENSMUST00000098630	ENSMUSP00000096231	TRANSLATION	protein_coding	-	CCDS52594.1	1	160	15	2.864	5.7	39.5	0	-4,-6	-	-	17.702	MINOR
ENSMUSG00000055994	Nod2	ENSMUST00000109634	ENSMUSP00000105262	TRANSLATION	protein_coding	-	-	1	1020	11	7	0	270.9	0	-4,-5	-	-	18	MINOR
ENSMUSG00000055994	Nod2	ENSMUST00000054324	ENSMUSP00000050538	TRANSLATION	protein_coding	-	-	1	1035	11	7	0	270.9	0	-4,-7	-	-	18	MINOR
ENSMUSG00000055994	Nod2	ENSMUST00000118370	ENSMUSP00000113773	TRANSLATION	protein_coding	-	CCDS52632.1	1	1013	11	7	5.1	270.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000055994	Nod2	ENSMUST00000124091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079116	Defa41	ENSMUST00000110754	ENSMUSP00000106382	TRANSLATION	protein_coding	-	CCDS52506.1	5	93	0	0	0.5	100.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031575	Ash2l	ENSMUST00000156759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031575	Ash2l	ENSMUST00000110609	ENSMUSP00000106239	TRANSLATION	protein_coding	-	CCDS40308.1	1	534	4	11.43	4.9	49.6	0	-4,-5	-	-	17	ALTERNATIVE:1
ENSMUSG00000031575	Ash2l	ENSMUST00000110608	ENSMUSP00000106238	TRANSLATION	protein_coding	-	-	5	501	4	10.43	2.4	26.2	0	-4,-5	-	-	11.529	MINOR
ENSMUSG00000031575	Ash2l	ENSMUST00000139946	ENSMUSP00000118346	TRANSLATION	nonsense_mediated_decay	-	-	5	346	4	5.75	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000031575	Ash2l	ENSMUST00000151856	ENSMUSP00000117488	TRANSLATION	nonsense_mediated_decay	-	-	1	352	4	5.16	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000031575	Ash2l	ENSMUST00000068892	ENSMUSP00000070957	TRANSLATION	protein_coding	-	CCDS40307.1	1	623	4	11.43	1.5	49.6	0	-4,-6	-	-	16.128	PRINCIPAL:4
ENSMUSG00000031575	Ash2l	ENSMUST00000166078	ENSMUSP00000132546	TRANSLATION	protein_coding	-	CCDS40308.1	5	534	4	11.43	4.9	49.6	0	-4,-5	-	-	17	ALTERNATIVE:1
ENSMUSG00000031575	Ash2l	ENSMUST00000110610	ENSMUSP00000106240	TRANSLATION	protein_coding	-	CCDS40308.1	1	534	4	11.43	4.9	49.6	0	-4,-5	-	-	17	ALTERNATIVE:1
ENSMUSG00000031575	Ash2l	ENSMUST00000142358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031575	Ash2l	ENSMUST00000149550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031575	Ash2l	ENSMUST00000211188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049577	Zfpm1	ENSMUST00000176883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049577	Zfpm1	ENSMUST00000176690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049577	Zfpm1	ENSMUST00000177356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049577	Zfpm1	ENSMUST00000054052	ENSMUSP00000058037	TRANSLATION	protein_coding	-	CCDS22733.1	1	995	16	5	1.5	35.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000049577	Zfpm1	ENSMUST00000212315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044222	Defb13	ENSMUST00000060587	ENSMUSP00000060997	TRANSLATION	protein_coding	-	CCDS40290.1	1	64	0	0	1.5	31.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031847	1700030J22Rik	ENSMUST00000070577	ENSMUSP00000070601	TRANSLATION	protein_coding	-	CCDS22695.1	1	409	0	0	1.5	613.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031847	1700030J22Rik	ENSMUST00000213068	ENSMUSP00000148789	TRANSLATION	protein_coding	-	CCDS22695.1	1	409	0	0	1.5	613.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046108	Il17c	ENSMUST00000050963	ENSMUSP00000056008	TRANSLATION	protein_coding	-	-	1	182	0	0.6	0	96.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000208166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000208770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000207792	ENSMUSP00000146694	TRANSLATION	protein_coding	-	CCDS22094.1	1	309	0	4.52	0.5	42.3	1	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000207551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000208683	ENSMUSP00000146904	TRANSLATION	nonsense_mediated_decay	-	-	1	194	0	1.52	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000031497	Tnfsf13b	ENSMUST00000033892	ENSMUSP00000033892	TRANSLATION	protein_coding	-	CCDS85498.1	1	290	0	4.02	0.5	42.3	1	-4,-6	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000216387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037940	Inpp4b	ENSMUST00000172031	ENSMUSP00000131324	TRANSLATION	protein_coding	-	CCDS80902.1	5	927	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000217122	ENSMUSP00000150541	TRANSLATION	protein_coding	-	CCDS80901.1	1	941	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000215332	ENSMUSP00000148972	TRANSLATION	protein_coding	-	CCDS80902.1	1	927	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000164870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037940	Inpp4b	ENSMUST00000216036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037940	Inpp4b	ENSMUST00000165821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037940	Inpp4b	ENSMUST00000172167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037940	Inpp4b	ENSMUST00000109851	ENSMUSP00000105477	TRANSLATION	protein_coding	-	-	1	809	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000169116	ENSMUSP00000131947	TRANSLATION	protein_coding	stop	-	5	818	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037940	Inpp4b	ENSMUST00000170160	ENSMUSP00000132156	TRANSLATION	protein_coding	stop	-	1	633	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037940	Inpp4b	ENSMUST00000042529	ENSMUSP00000044466	TRANSLATION	protein_coding	-	CCDS22446.1	1	924	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000037940	Inpp4b	ENSMUST00000213285	ENSMUSP00000150520	TRANSLATION	protein_coding	stop	-	1	818	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037940	Inpp4b	ENSMUST00000109852	ENSMUSP00000105478	TRANSLATION	protein_coding	-	CCDS80901.1	5	941	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000037940	Inpp4b	ENSMUST00000169387	ENSMUSP00000130104	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094500	Smim18	ENSMUST00000179364	ENSMUSP00000136891	TRANSLATION	protein_coding	-	CCDS57615.1	1	93	0	0	9.5	70.3	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000031781	Ciapin1	ENSMUST00000161762	ENSMUSP00000123794	TRANSLATION	nonsense_mediated_decay	start	-	5	152	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031781	Ciapin1	ENSMUST00000162538	ENSMUSP00000125451	TRANSLATION	protein_coding	-	CCDS22549.1	1	309	0	4.5	6.3	111.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031781	Ciapin1	ENSMUST00000162589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031781	Ciapin1	ENSMUST00000034233	ENSMUSP00000034233	TRANSLATION	protein_coding	-	CCDS22549.1	5	309	0	4.5	6.3	111.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031781	Ciapin1	ENSMUST00000160245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031781	Ciapin1	ENSMUST00000160898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031781	Ciapin1	ENSMUST00000161792	ENSMUSP00000125474	TRANSLATION	protein_coding	start	-	5	254	0	2.75	0	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031781	Ciapin1	ENSMUST00000159377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031781	Ciapin1	ENSMUST00000162357	ENSMUSP00000148350	TRANSLATION	protein_coding	start	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031781	Ciapin1	ENSMUST00000160301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031979	Cog2	ENSMUST00000108803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031979	Cog2	ENSMUST00000176159	ENSMUSP00000135600	TRANSLATION	nonsense_mediated_decay	-	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031979	Cog2	ENSMUST00000034460	ENSMUSP00000034460	TRANSLATION	protein_coding	-	CCDS22771.1	1	731	0	0	1.5	286.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031979	Cog2	ENSMUST00000176279	ENSMUSP00000135022	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0	0	121.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031979	Cog2	ENSMUST00000129977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048516	Adam26a	ENSMUST00000049577	ENSMUSP00000058256	TRANSLATION	protein_coding	-	CCDS22269.1	1	697	20	0.48	0.5	412.3	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000038872	Zfhx3	ENSMUST00000188994	ENSMUSP00000140025	TRANSLATION	protein_coding	stop	-	5	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038872	Zfhx3	ENSMUST00000220518	ENSMUSP00000152353	TRANSLATION	protein_coding	-	CCDS22651.1	5	3723	34	0	0.5	265.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038872	Zfhx3	ENSMUST00000043896	ENSMUSP00000044612	TRANSLATION	protein_coding	-	CCDS22651.1	1	3723	34	0	0.5	265.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038872	Zfhx3	ENSMUST00000221632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038872	Zfhx3	ENSMUST00000221100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038872	Zfhx3	ENSMUST00000221237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038872	Zfhx3	ENSMUST00000212094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071138	Tex24	ENSMUST00000095375	ENSMUSP00000093021	TRANSLATION	protein_coding	-	CCDS22215.1	1	351	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000074447	Defa21	ENSMUST00000076754	ENSMUSP00000076041	TRANSLATION	protein_coding	-	CCDS40264.1	1	93	0	0	0.5	97.4	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000043243	Fam129c	ENSMUST00000127285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043243	Fam129c	ENSMUST00000125339	ENSMUSP00000119708	TRANSLATION	protein_coding	start	-	5	154	0	0	0	0	0	-1,-7	-	-	-1	MINOR
ENSMUSG00000043243	Fam129c	ENSMUST00000141594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043243	Fam129c	ENSMUST00000126559	ENSMUSP00000123621	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043243	Fam129c	ENSMUST00000132891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043243	Fam129c	ENSMUST00000125525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043243	Fam129c	ENSMUST00000124485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043243	Fam129c	ENSMUST00000143662	ENSMUSP00000123432	TRANSLATION	protein_coding	-	CCDS52587.1	5	591	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000031495	Cd209d	ENSMUST00000209176	ENSMUSP00000147198	TRANSLATION	protein_coding	-	-	1	207	14	3.48	0	80	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031495	Cd209d	ENSMUST00000011445	ENSMUSP00000011445	TRANSLATION	protein_coding	-	CCDS22075.1	1	237	14	3.48	1.5	80	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000031779	Ccl22	ENSMUST00000156137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031779	Ccl22	ENSMUST00000034231	ENSMUSP00000034231	TRANSLATION	protein_coding	-	CCDS40441.1	1	92	0	1.55	5.1	64.7	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000031951	Tmem231	ENSMUST00000034429	ENSMUSP00000034429	TRANSLATION	protein_coding	-	CCDS52676.1	1	315	0	0	6.3	424.7	2	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000031951	Tmem231	ENSMUST00000213050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031951	Tmem231	ENSMUST00000211866	ENSMUSP00000148428	TRANSLATION	nonsense_mediated_decay	-	-	1	163	0	0	0	138.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031536	Polb	ENSMUST00000210950	ENSMUSP00000148216	TRANSLATION	nonsense_mediated_decay	-	-	2	111	0	3.5	0	68.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031536	Polb	ENSMUST00000033938	ENSMUSP00000033938	TRANSLATION	protein_coding	-	CCDS22181.1	1	335	15	10	15	334.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000003812	Dnase2a	ENSMUST00000153215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003812	Dnase2a	ENSMUST00000128400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003812	Dnase2a	ENSMUST00000134569	ENSMUSP00000117198	TRANSLATION	protein_coding	stop	-	3	181	0	1.278	0	95.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000003812	Dnase2a	ENSMUST00000003910	ENSMUSP00000003910	TRANSLATION	protein_coding	-	CCDS22484.1	1	353	0	2.418	0.5	387.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000003812	Dnase2a	ENSMUST00000109744	ENSMUSP00000105366	TRANSLATION	protein_coding	-	-	1	332	0	2.22	0	361.6	0	-4,-6	-	-	9.972	MINOR
ENSMUSG00000003812	Dnase2a	ENSMUST00000145292	ENSMUSP00000138203	TRANSLATION	protein_coding	-	-	5	149	0	0.678	0	64.7	0	3,-2	-	-	1.68	MINOR
ENSMUSG00000003812	Dnase2a	ENSMUST00000148573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003812	Dnase2a	ENSMUST00000155942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003812	Dnase2a	ENSMUST00000135219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074203	G430095P16Rik	ENSMUST00000098571	ENSMUSP00000096170	TRANSLATION	protein_coding	-	-	1	147	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000018796	Acsl1	ENSMUST00000110371	ENSMUSP00000106000	TRANSLATION	protein_coding	-	-	5	699	23	10.453	7.3	387.5	2	-4,-5	-	-	20.187	ALTERNATIVE:1
ENSMUSG00000018796	Acsl1	ENSMUST00000133161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018796	Acsl1	ENSMUST00000211644	ENSMUSP00000147647	TRANSLATION	protein_coding	stop	-	2	58	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018796	Acsl1	ENSMUST00000110372	ENSMUSP00000106001	TRANSLATION	protein_coding	-	CCDS22291.1	1	699	23	10.303	8.3	394.2	2	-4,-5	-	-	20.7	PRINCIPAL:2
ENSMUSG00000018796	Acsl1	ENSMUST00000152423	ENSMUSP00000118845	TRANSLATION	protein_coding	start	-	5	95	4	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018796	Acsl1	ENSMUST00000210929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018796	Acsl1	ENSMUST00000034046	ENSMUSP00000034046	TRANSLATION	protein_coding	-	CCDS22291.1	1	699	23	10.303	8.3	394.2	2	-4,-5	-	-	20.7	PRINCIPAL:2
ENSMUSG00000018796	Acsl1	ENSMUST00000128746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018796	Acsl1	ENSMUST00000211289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018796	Acsl1	ENSMUST00000135955	ENSMUSP00000117546	TRANSLATION	protein_coding	stop	-	3	136	0	1.04	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000018796	Acsl1	ENSMUST00000130563	ENSMUSP00000114473	TRANSLATION	protein_coding	stop	-	2	86	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000031448	Adprhl1	ENSMUST00000171619	ENSMUSP00000132014	TRANSLATION	protein_coding	stop	-	5	135	0	2.4	0	68.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031448	Adprhl1	ENSMUST00000033825	ENSMUSP00000033825	TRANSLATION	protein_coding	-	CCDS22108.1	1	353	3	6.132	10.2	171.6	0	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000031448	Adprhl1	ENSMUST00000168498	ENSMUSP00000131920	TRANSLATION	protein_coding	stop	-	3	205	3	3.6	0	64.1	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000031448	Adprhl1	ENSMUST00000166438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031448	Adprhl1	ENSMUST00000204916	ENSMUSP00000145145	TRANSLATION	protein_coding	-	-	5	1697	3	6.132	0.5	171.6	0	-3,-4	-	-	15	MINOR
ENSMUSG00000031529	Tnks	ENSMUST00000209904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031529	Tnks	ENSMUST00000210870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031529	Tnks	ENSMUST00000209632	ENSMUSP00000147527	TRANSLATION	protein_coding	start	-	5	48	5	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031529	Tnks	ENSMUST00000033929	ENSMUSP00000033929	TRANSLATION	protein_coding	-	CCDS22242.1	1	1320	6	17.18	1.5	526.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031529	Tnks	ENSMUST00000210014	ENSMUSP00000147555	TRANSLATION	protein_coding	start	-	3	151	6	3.5	0	74.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031529	Tnks	ENSMUST00000211065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031585	Gtf2e2	ENSMUST00000190675	ENSMUSP00000140383	TRANSLATION	protein_coding	stop	-	3	30	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031585	Gtf2e2	ENSMUST00000167264	ENSMUSP00000129834	TRANSLATION	protein_coding	-	CCDS22236.1	1	292	0	7.83	13.6	84.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031585	Gtf2e2	ENSMUST00000171010	ENSMUSP00000132287	TRANSLATION	protein_coding	-	CCDS22236.1	5	292	0	7.83	13.6	84.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031585	Gtf2e2	ENSMUST00000187392	ENSMUSP00000141167	TRANSLATION	protein_coding	stop	-	3	62	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031585	Gtf2e2	ENSMUST00000170705	ENSMUSP00000126284	TRANSLATION	protein_coding	-	CCDS22236.1	1	292	0	7.83	13.6	84.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031585	Gtf2e2	ENSMUST00000190639	ENSMUSP00000141016	TRANSLATION	protein_coding	stop	-	5	127	0	3.83	0	49.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031585	Gtf2e2	ENSMUST00000186200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045232	Rln3	ENSMUST00000061923	ENSMUSP00000051392	TRANSLATION	protein_coding	-	CCDS22466.1	1	141	0	0	1.5	25.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048967	Yjefn3	ENSMUST00000152938	ENSMUSP00000118931	TRANSLATION	protein_coding	-	-	5	251	10	4.6	1.5	97.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000048967	Yjefn3	ENSMUST00000152456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048967	Yjefn3	ENSMUST00000180068	ENSMUSP00000136145	TRANSLATION	protein_coding	start	-	5	199	3	3.6	0	72.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037363	Letm2	ENSMUST00000210234	ENSMUSP00000148232	TRANSLATION	protein_coding	-	-	5	221	0	0.73	0	136.1	1	-4,-2	-	-	1.038	MINOR
ENSMUSG00000037363	Letm2	ENSMUST00000211133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037363	Letm2	ENSMUST00000209734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037363	Letm2	ENSMUST00000210914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037363	Letm2	ENSMUST00000211422	ENSMUSP00000147507	TRANSLATION	protein_coding	-	-	5	196	0	0	0	22.9	0	-4,-2	-	-	0	MINOR
ENSMUSG00000037363	Letm2	ENSMUST00000210321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037363	Letm2	ENSMUST00000209982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037363	Letm2	ENSMUST00000210810	ENSMUSP00000148035	TRANSLATION	protein_coding	-	-	1	288	0	1.05	0	172.9	1	-4,-2	-	-	1.68	MINOR
ENSMUSG00000037363	Letm2	ENSMUST00000211001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037363	Letm2	ENSMUST00000210616	ENSMUSP00000147648	TRANSLATION	protein_coding	-	-	1	171	0	0	0	39.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000037363	Letm2	ENSMUST00000209539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037363	Letm2	ENSMUST00000079160	ENSMUSP00000078160	TRANSLATION	protein_coding	-	CCDS52527.1	1	480	0	3.21	0.5	337.2	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037363	Letm2	ENSMUST00000210221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000176053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000109767	ENSMUSP00000105389	TRANSLATION	protein_coding	-	CCDS40410.2	1	663	24	6.218	1.5	521.1	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000001909	Trmt1	ENSMUST00000131700	ENSMUSP00000122526	TRANSLATION	nonsense_mediated_decay	-	-	5	114	2	0	0	36.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000177084	ENSMUSP00000135675	TRANSLATION	protein_coding	stop	-	3	260	18	3.764	0	247.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000175784	ENSMUSP00000135273	TRANSLATION	protein_coding	stop	-	5	221	14	1.55	0	126.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000176914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000175704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000175884	ENSMUSP00000135680	TRANSLATION	nonsense_mediated_decay	start	-	5	67	4	0.39	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000138300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000148118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000127915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000175767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000177531	ENSMUSP00000135540	TRANSLATION	protein_coding	stop	-	5	173	7	0	0	66.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000152301	ENSMUSP00000116712	TRANSLATION	protein_coding	stop	-	5	242	17	2.564	0	160.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000177364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000001974	ENSMUSP00000001974	TRANSLATION	protein_coding	-	CCDS40410.2	1	663	24	6.218	1.5	521.1	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000001909	Trmt1	ENSMUST00000177423	ENSMUSP00000135327	TRANSLATION	protein_coding	stop	-	5	262	18	3.464	0	218.2	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000109768	ENSMUSP00000105390	TRANSLATION	protein_coding	-	CCDS52619.1	1	656	24	6.218	0.5	521.1	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000001909	Trmt1	ENSMUST00000125370	ENSMUSP00000135510	TRANSLATION	protein_coding	-	-	5	634	22	6.188	0	492.1	0	-4,0	-	-	14.868	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000143427	ENSMUSP00000117140	TRANSLATION	nonsense_mediated_decay	-	-	5	103	2	0	0	36.7	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000175980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000128537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000077990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000150085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000128022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000137953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000177286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001909	Trmt1	ENSMUST00000177260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001909	Trmt1	ENSMUST00000136423	ENSMUSP00000134723	TRANSLATION	protein_coding	start	-	3	205	3	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001909	Trmt1	ENSMUST00000175870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051176	Zfp42	ENSMUST00000209356	ENSMUSP00000147607	TRANSLATION	protein_coding	-	CCDS22267.1	1	288	16	0.8	0.5	73.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051176	Zfp42	ENSMUST00000211248	ENSMUSP00000147606	TRANSLATION	protein_coding	-	CCDS22267.1	1	288	16	0.8	0.5	73.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051176	Zfp42	ENSMUST00000082120	ENSMUSP00000080765	TRANSLATION	protein_coding	-	CCDS22267.1	1	288	16	0.8	0.5	73.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047388	Atmin	ENSMUST00000109099	ENSMUSP00000104727	TRANSLATION	protein_coding	-	CCDS22694.2	1	818	10	0.88	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046589	Lrrc8e	ENSMUST00000053035	ENSMUSP00000052055	TRANSLATION	protein_coding	-	CCDS22079.1	1	795	0	0.32	3.9	502.8	3	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046589	Lrrc8e	ENSMUST00000207770	ENSMUSP00000146637	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	103.3	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000025044	Msr1	ENSMUST00000210525	ENSMUSP00000147644	TRANSLATION	protein_coding	stop	-	5	213	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000025044	Msr1	ENSMUST00000210589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025044	Msr1	ENSMUST00000210681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025044	Msr1	ENSMUST00000026021	ENSMUSP00000026021	TRANSLATION	protein_coding	-	CCDS52542.1	5	458	0	2	0.5	226.7	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025044	Msr1	ENSMUST00000170091	ENSMUSP00000132535	TRANSLATION	protein_coding	-	CCDS52543.1	1	354	0	0	0.5	122.9	1	-4,-6	-	-	0	MINOR
ENSMUSG00000033106	Slc7a6os	ENSMUST00000035925	ENSMUSP00000039029	TRANSLATION	protein_coding	-	CCDS22632.1	1	306	0	0	1.5	37.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000033106	Slc7a6os	ENSMUST00000212397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033106	Slc7a6os	ENSMUST00000212150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033106	Slc7a6os	ENSMUST00000212587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031880	Rrad	ENSMUST00000212163	ENSMUSP00000148494	TRANSLATION	protein_coding	stop	-	2	100	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031880	Rrad	ENSMUST00000034351	ENSMUSP00000034351	TRANSLATION	protein_coding	-	CCDS22584.1	1	307	15	3.7	2.7	93.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033545	Znrf1	ENSMUST00000166859	ENSMUSP00000132939	TRANSLATION	protein_coding	-	CCDS52674.1	5	127	8	1.714	0.5	39.7	0	-4,-7	-	-	16.002	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000174333	ENSMUSP00000134634	TRANSLATION	protein_coding	-	CCDS52674.1	3	127	8	1.714	0.5	39.7	0	-4,-7	-	-	16.002	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000173692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033545	Znrf1	ENSMUST00000173481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033545	Znrf1	ENSMUST00000174454	ENSMUSP00000133519	TRANSLATION	protein_coding	-	-	3	65	6	1.714	0	39.7	0	-4,-5	-	-	14.664	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000173922	ENSMUSP00000134369	TRANSLATION	nonsense_mediated_decay	start	-	2	28	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000172856	ENSMUSP00000133309	TRANSLATION	protein_coding	-	CCDS22676.1	5	227	11	1.714	7.1	39.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033545	Znrf1	ENSMUST00000173506	ENSMUSP00000133993	TRANSLATION	protein_coding	-	CCDS22676.1	2	227	11	1.714	7.1	39.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033545	Znrf1	ENSMUST00000174376	ENSMUSP00000133455	TRANSLATION	nonsense_mediated_decay	start	-	5	54	8	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000095176	ENSMUSP00000092799	TRANSLATION	protein_coding	-	CCDS22676.1	1	227	11	1.714	7.1	39.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033545	Znrf1	ENSMUST00000173781	ENSMUSP00000134232	TRANSLATION	protein_coding	-	-	3	65	6	1.714	0	39.7	0	-4,-5	-	-	14.664	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000173819	ENSMUSP00000133361	TRANSLATION	protein_coding	start	-	3	41	3	0.464	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000171182	ENSMUSP00000127956	TRANSLATION	protein_coding	-	CCDS52673.1	3	195	9	1.514	0.5	39.7	0	-4,-2	-	-	15.966	MINOR
ENSMUSG00000033545	Znrf1	ENSMUST00000168428	ENSMUSP00000126684	TRANSLATION	protein_coding	-	CCDS22676.1	1	227	11	1.714	7.1	39.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000033545	Znrf1	ENSMUST00000173726	ENSMUSP00000133472	TRANSLATION	protein_coding	start	-	3	88	9	1.514	0	39.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031835	Mbtps1	ENSMUST00000098362	ENSMUSP00000095965	TRANSLATION	protein_coding	-	CCDS22707.1	1	1052	3	5.48	1.5	135.1	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031835	Mbtps1	ENSMUST00000212685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031835	Mbtps1	ENSMUST00000212244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031835	Mbtps1	ENSMUST00000212290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031835	Mbtps1	ENSMUST00000081381	ENSMUSP00000080117	TRANSLATION	protein_coding	-	CCDS22707.1	1	1052	3	5.48	1.5	135.1	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031835	Mbtps1	ENSMUST00000212736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031835	Mbtps1	ENSMUST00000212082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031835	Mbtps1	ENSMUST00000212601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031835	Mbtps1	ENSMUST00000212813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095294	Gm21119	ENSMUST00000178438	ENSMUSP00000137434	TRANSLATION	protein_coding	-	CCDS57608.1	1	350	0	3.03	0.5	92.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002342	Tmem161a	ENSMUST00000123923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002342	Tmem161a	ENSMUST00000182942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002342	Tmem161a	ENSMUST00000182980	ENSMUSP00000138499	TRANSLATION	protein_coding	-	CCDS80890.1	1	328	0	0	1.5	380.9	7	-3,-5	-	-	0.244	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000143543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002342	Tmem161a	ENSMUST00000147656	ENSMUSP00000138017	TRANSLATION	nonsense_mediated_decay	-	-	1	323	0	0	0	344.2	4	-1,-4	-	-	-1	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000125755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002342	Tmem161a	ENSMUST00000133339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002342	Tmem161a	ENSMUST00000149105	ENSMUSP00000123084	TRANSLATION	protein_coding	start	-	5	454	0	0	0	527.1	9	-1,-4	-	-	-1	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000126268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002342	Tmem161a	ENSMUST00000182365	ENSMUSP00000138641	TRANSLATION	protein_coding	stop	-	5	126	0	0	0	112.6	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000125906	ENSMUSP00000137791	TRANSLATION	nonsense_mediated_decay	start	-	5	57	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000182715	ENSMUSP00000138432	TRANSLATION	nonsense_mediated_decay	-	-	1	192	0	0	0	45.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000002342	Tmem161a	ENSMUST00000002413	ENSMUSP00000002413	TRANSLATION	protein_coding	-	CCDS40369.1	1	480	0	0	5.1	594.9	9	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000002342	Tmem161a	ENSMUST00000133084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031608	Galnt7	ENSMUST00000034021	ENSMUSP00000034021	TRANSLATION	protein_coding	-	CCDS22317.1	1	657	23	8.51	7.5	173.6	0	1,-3	-	-	20.712	PRINCIPAL:3
ENSMUSG00000031608	Galnt7	ENSMUST00000139417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031608	Galnt7	ENSMUST00000156907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031608	Galnt7	ENSMUST00000110316	ENSMUSP00000105945	TRANSLATION	protein_coding	-	CCDS52552.1	1	657	23	8.51	7.5	178.4	0	1,-3	-	-	21	ALTERNATIVE:1
ENSMUSG00000063206	Defa34	ENSMUST00000075268	ENSMUSP00000074745	TRANSLATION	protein_coding	-	CCDS52514.1	2	93	0	0	0.5	115.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000055148	Klf2	ENSMUST00000067912	ENSMUSP00000064823	TRANSLATION	protein_coding	-	CCDS22412.1	1	354	12	1.2	0.5	68.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031491	Chrna6	ENSMUST00000033882	ENSMUSP00000033882	TRANSLATION	protein_coding	-	CCDS40312.1	1	494	0	4.75	2.7	551.7	0	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035559	Mpv17l2	ENSMUST00000212617	ENSMUSP00000148307	TRANSLATION	nonsense_mediated_decay	start	-	1	36	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000035559	Mpv17l2	ENSMUST00000212385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035559	Mpv17l2	ENSMUST00000213010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035559	Mpv17l2	ENSMUST00000038626	ENSMUSP00000037929	TRANSLATION	protein_coding	-	CCDS22380.1	1	200	0	0	1.5	102.6	3	-2,1	-	-	6	PRINCIPAL:1
ENSMUSG00000063253	Scoc	ENSMUST00000212449	ENSMUSP00000148829	TRANSLATION	protein_coding	-	-	3	47	0	1.08	0	0	0	-4,-5	-	-	3.114	MINOR
ENSMUSG00000063253	Scoc	ENSMUST00000212500	ENSMUSP00000148753	TRANSLATION	protein_coding	stop	-	5	35	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063253	Scoc	ENSMUST00000212031	ENSMUSP00000148647	TRANSLATION	protein_coding	-	CCDS52608.1	1	82	0	2.08	10	97.3	0	-4,-5	-	-	14.916	PRINCIPAL:3
ENSMUSG00000063253	Scoc	ENSMUST00000212947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063253	Scoc	ENSMUST00000081506	ENSMUSP00000080221	TRANSLATION	protein_coding	-	CCDS22453.1	1	125	0	2.08	1.5	95.5	0	-4,-5	-	-	11.976	MINOR
ENSMUSG00000063253	Scoc	ENSMUST00000212473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063253	Scoc	ENSMUST00000167525	ENSMUSP00000128210	TRANSLATION	protein_coding	-	CCDS85570.1	1	81	0	2.08	10	98.7	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000063253	Scoc	ENSMUST00000212849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063253	Scoc	ENSMUST00000212905	ENSMUSP00000148577	TRANSLATION	protein_coding	-	CCDS52608.1	3	82	0	2.08	10	97.3	0	-4,-5	-	-	14.916	PRINCIPAL:3
ENSMUSG00000063253	Scoc	ENSMUST00000212871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034880	Mrpl34	ENSMUST00000048914	ENSMUSP00000044497	TRANSLATION	protein_coding	-	CCDS40383.1	1	92	0	1.75	1.5	64.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000031660	Brd7	ENSMUST00000149841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031660	Brd7	ENSMUST00000146370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031660	Brd7	ENSMUST00000131748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031660	Brd7	ENSMUST00000145609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031660	Brd7	ENSMUST00000135471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031660	Brd7	ENSMUST00000139675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031660	Brd7	ENSMUST00000034085	ENSMUSP00000034085	TRANSLATION	protein_coding	-	CCDS22510.1	1	651	0	2.5	6.3	363.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040263	Klhdc4	ENSMUST00000174192	ENSMUSP00000134487	TRANSLATION	protein_coding	-	-	5	527	0	2.948	0	56.5	0	-4,-5	-	-	8.178	MINOR
ENSMUSG00000040263	Klhdc4	ENSMUST00000174206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040263	Klhdc4	ENSMUST00000045884	ENSMUSP00000043439	TRANSLATION	protein_coding	-	CCDS22729.1	1	584	0	3.663	0.5	92.5	0	-4,-5	-	-	11.904	PRINCIPAL:1
ENSMUSG00000040263	Klhdc4	ENSMUST00000174665	ENSMUSP00000134474	TRANSLATION	nonsense_mediated_decay	-	-	5	162	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040263	Klhdc4	ENSMUST00000172507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040263	Klhdc4	ENSMUST00000174255	ENSMUSP00000134439	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040263	Klhdc4	ENSMUST00000172954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040263	Klhdc4	ENSMUST00000174709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040263	Klhdc4	ENSMUST00000172470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040263	Klhdc4	ENSMUST00000174717	ENSMUSP00000134361	TRANSLATION	protein_coding	-	-	5	553	0	2.865	0	94	0	-4,-5	-	-	10.404	MINOR
ENSMUSG00000025318	Jph3	ENSMUST00000167439	ENSMUSP00000126190	TRANSLATION	nonsense_mediated_decay	-	-	1	744	0	0	0.5	161	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000025318	Jph3	ENSMUST00000172209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025318	Jph3	ENSMUST00000169735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025318	Jph3	ENSMUST00000026357	ENSMUSP00000026357	TRANSLATION	protein_coding	-	CCDS22728.1	1	744	0	0	0.5	161	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034112	Atp2c2	ENSMUST00000212454	ENSMUSP00000148585	TRANSLATION	protein_coding	stop	-	3	176	1	3.005	0	67.4	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000034112	Atp2c2	ENSMUST00000095171	ENSMUSP00000092794	TRANSLATION	protein_coding	-	CCDS52684.1	1	944	14	16.495	2.7	455.9	5	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000061959	Ces1e	ENSMUST00000176282	ENSMUSP00000135636	TRANSLATION	protein_coding	-	-	5	561	6	12.3	1.5	557.8	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000061959	Ces1e	ENSMUST00000034173	ENSMUSP00000034173	TRANSLATION	protein_coding	-	CCDS22529.1	1	562	6	12.3	1.5	557.8	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000061959	Ces1e	ENSMUST00000175983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031818	Cox4i1	ENSMUST00000181586	ENSMUSP00000138019	TRANSLATION	protein_coding	-	CCDS40498.1	1	169	0	4.75	15	199.1	1	-3,1	-	-	16	PRINCIPAL:1
ENSMUSG00000031818	Cox4i1	ENSMUST00000181795	ENSMUSP00000138063	TRANSLATION	protein_coding	stop	-	3	92	0	2.5	0	127.2	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000031818	Cox4i1	ENSMUST00000181847	ENSMUSP00000138053	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031818	Cox4i1	ENSMUST00000180856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031818	Cox4i1	ENSMUST00000181026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031818	Cox4i1	ENSMUST00000181172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031818	Cox4i1	ENSMUST00000034276	ENSMUSP00000034276	TRANSLATION	protein_coding	-	CCDS40498.1	1	169	0	4.75	15	199.1	1	-3,1	-	-	16	PRINCIPAL:1
ENSMUSG00000036330	Slc18a1	ENSMUST00000142548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036330	Slc18a1	ENSMUST00000147674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036330	Slc18a1	ENSMUST00000142710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036330	Slc18a1	ENSMUST00000148856	ENSMUSP00000148432	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036330	Slc18a1	ENSMUST00000037478	ENSMUSP00000046924	TRANSLATION	protein_coding	-	CCDS22344.1	1	521	0	0	3.9	112.1	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000054717	Hmgb2	ENSMUST00000067925	ENSMUSP00000065940	TRANSLATION	protein_coding	-	CCDS40343.1	1	210	0	3.6	1.7	189	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054717	Hmgb2	ENSMUST00000211198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054717	Hmgb2	ENSMUST00000210871	ENSMUSP00000147297	TRANSLATION	protein_coding	stop	-	5	99	0	2	2	99.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031631	Cfap97	ENSMUST00000145229	ENSMUSP00000115734	TRANSLATION	protein_coding	stop	-	1	288	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031631	Cfap97	ENSMUST00000145080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031631	Cfap97	ENSMUST00000110376	ENSMUSP00000106005	TRANSLATION	protein_coding	-	-	5	547	0	0	0	62.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031631	Cfap97	ENSMUST00000034048	ENSMUSP00000034048	TRANSLATION	protein_coding	-	CCDS22288.1	1	541	0	0	0.5	62.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000031631	Cfap97	ENSMUST00000154040	ENSMUSP00000120522	TRANSLATION	protein_coding	stop	-	3	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031631	Cfap97	ENSMUST00000164504	ENSMUSP00000133211	TRANSLATION	protein_coding	-	CCDS22288.1	1	541	0	0	0.5	62.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000057672	Pkn1	ENSMUST00000128523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057672	Pkn1	ENSMUST00000132945	ENSMUSP00000115054	TRANSLATION	nonsense_mediated_decay	-	-	1	796	15	6.86	0	252.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057672	Pkn1	ENSMUST00000135356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057672	Pkn1	ENSMUST00000146057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057672	Pkn1	ENSMUST00000144258	ENSMUSP00000116235	TRANSLATION	protein_coding	-	CCDS57627.1	1	951	20	11.33	6.3	421	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000057672	Pkn1	ENSMUST00000138898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057672	Pkn1	ENSMUST00000005616	ENSMUSP00000005616	TRANSLATION	protein_coding	-	CCDS22459.1	1	946	20	11.33	6.3	421	0	-4,-6	-	-	20	PRINCIPAL:3
ENSMUSG00000057672	Pkn1	ENSMUST00000124946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057672	Pkn1	ENSMUST00000133195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036872	Abcc12	ENSMUST00000156610	ENSMUSP00000123578	TRANSLATION	nonsense_mediated_decay	-	-	1	664	12	8.34	0	148.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000036872	Abcc12	ENSMUST00000080115	ENSMUSP00000079014	TRANSLATION	protein_coding	-	CCDS22502.1	1	1366	24	20.534	1.5	363.2	9	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000036872	Abcc12	ENSMUST00000129898	ENSMUSP00000122577	TRANSLATION	nonsense_mediated_decay	-	-	1	738	12	10.054	0	148.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000036872	Abcc12	ENSMUST00000152438	ENSMUSP00000114582	TRANSLATION	protein_coding	-	-	1	738	12	10.054	0	148.5	5	-4,-7	-	-	0	MINOR
ENSMUSG00000036872	Abcc12	ENSMUST00000156066	ENSMUSP00000120282	TRANSLATION	nonsense_mediated_decay	start	-	1	524	9	7.79	0	172.5	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000036872	Abcc12	ENSMUST00000131806	ENSMUSP00000116866	TRANSLATION	nonsense_mediated_decay	-	-	1	769	12	10.354	0	148.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000036872	Abcc12	ENSMUST00000131423	ENSMUSP00000122402	TRANSLATION	protein_coding	-	CCDS22502.1	5	1366	24	20.534	1.5	363.2	9	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031774	Fam192a	ENSMUST00000212429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031774	Fam192a	ENSMUST00000212262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031774	Fam192a	ENSMUST00000212788	ENSMUSP00000148325	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212083	ENSMUSP00000148547	TRANSLATION	protein_coding	stop	-	5	129	0	0	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000211833	ENSMUSP00000148649	TRANSLATION	nonsense_mediated_decay	start	-	5	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212765	ENSMUSP00000148497	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	87.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212791	ENSMUSP00000148506	TRANSLATION	protein_coding	stop	-	5	194	0	0	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212258	ENSMUSP00000148392	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	95.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031774	Fam192a	ENSMUST00000212507	ENSMUSP00000148524	TRANSLATION	protein_coding	stop	-	5	173	0	0	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000034226	ENSMUSP00000034226	TRANSLATION	protein_coding	-	CCDS40439.1	1	254	0	0	7.5	113.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000031774	Fam192a	ENSMUST00000212159	ENSMUSP00000148342	TRANSLATION	protein_coding	stop	-	5	110	0	0	0	106.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000213022	ENSMUSP00000148543	TRANSLATION	protein_coding	stop	-	3	143	0	0	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000213008	ENSMUSP00000148379	TRANSLATION	protein_coding	stop	-	5	113	0	0	0	108.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212547	ENSMUSP00000148606	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031774	Fam192a	ENSMUST00000212485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034863	Ano8	ENSMUST00000212768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034863	Ano8	ENSMUST00000213382	ENSMUSP00000149365	TRANSLATION	protein_coding	-	-	5	1104	0	3.25	0	545.8	5	-4,-5	-	-	11.16	ALTERNATIVE:2
ENSMUSG00000034863	Ano8	ENSMUST00000213016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034863	Ano8	ENSMUST00000093450	ENSMUSP00000091157	TRANSLATION	protein_coding	-	CCDS52585.1	1	1060	0	3.25	0.5	559.8	5	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000017765	Slc12a4	ENSMUST00000034370	ENSMUSP00000034370	TRANSLATION	protein_coding	-	CCDS57642.1	1	1087	0	0	7.5	382.2	9	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000017765	Slc12a4	ENSMUST00000116429	ENSMUSP00000112130	TRANSLATION	protein_coding	-	CCDS22623.1	1	1085	0	0	7.5	382.2	9	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000017765	Slc12a4	ENSMUST00000141326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017765	Slc12a4	ENSMUST00000132231	ENSMUSP00000121018	TRANSLATION	protein_coding	start/stop	-	3	171	0	0	0	63.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000017765	Slc12a4	ENSMUST00000143381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095066	Defa20	ENSMUST00000084042	ENSMUSP00000081055	TRANSLATION	protein_coding	-	CCDS40273.1	1	95	0	1	0.5	81.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000056155	Nanos3	ENSMUST00000210202	ENSMUSP00000147775	TRANSLATION	protein_coding	-	-	1	174	8	0.6	1.5	88.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000056155	Nanos3	ENSMUST00000070102	ENSMUSP00000067385	TRANSLATION	protein_coding	-	CCDS22470.1	1	178	8	0.6	1.5	88.9	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000056155	Nanos3	ENSMUST00000211482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069998	Olfr372	ENSMUST00000215324	ENSMUSP00000149288	TRANSLATION	protein_coding	-	CCDS52592.1	5	314	0	0.36	2.9	193.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069998	Olfr372	ENSMUST00000093434	ENSMUSP00000132724	TRANSLATION	protein_coding	-	CCDS52592.1	-	314	0	0.36	2.9	193.2	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036510	Cdh8	ENSMUST00000145601	ENSMUSP00000122493	TRANSLATION	nonsense_mediated_decay	-	-	1	509	39	6.8	0	213.5	1	2,-2	-	-	-1	MINOR
ENSMUSG00000036510	Cdh8	ENSMUST00000128860	ENSMUSP00000117326	TRANSLATION	protein_coding	-	CCDS40448.1	1	799	48	10.72	7.5	443	4	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000036510	Cdh8	ENSMUST00000142129	ENSMUSP00000114507	TRANSLATION	protein_coding	-	CCDS72156.1	1	711	48	9.32	3.9	325.3	4	2,-2	-	-	10.536	MINOR
ENSMUSG00000036510	Cdh8	ENSMUST00000093249	ENSMUSP00000090935	TRANSLATION	protein_coding	-	CCDS22569.1	1	716	48	9.32	1.5	325.6	4	2,-2	-	-	9.429	MINOR
ENSMUSG00000036510	Cdh8	ENSMUST00000142475	ENSMUSP00000115977	TRANSLATION	protein_coding	-	-	1	247	13	2.9	0	80.9	1	2,-2	-	-	0	MINOR
ENSMUSG00000036510	Cdh8	ENSMUST00000126895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036510	Cdh8	ENSMUST00000155527	ENSMUSP00000123619	TRANSLATION	protein_coding	-	CCDS72155.1	1	754	48	9.72	1.5	328.1	4	2,-2	-	-	10.233	MINOR
ENSMUSG00000004383	Large1	ENSMUST00000004497	ENSMUSP00000004497	TRANSLATION	protein_coding	-	CCDS22420.1	1	756	3	1.74	12.8	267.3	1	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000004383	Large1	ENSMUST00000146249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004383	Large1	ENSMUST00000212459	ENSMUSP00000148336	TRANSLATION	protein_coding	-	CCDS22420.1	1	756	3	1.74	12.8	267.3	1	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000004383	Large1	ENSMUST00000119826	ENSMUSP00000112617	TRANSLATION	protein_coding	-	CCDS22420.1	5	756	3	1.74	12.8	267.3	1	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000065956	Defa37	ENSMUST00000084040	ENSMUSP00000081053	TRANSLATION	protein_coding	-	CCDS52510.1	1	93	0	0	0.5	109.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000031482	Slc25a15	ENSMUST00000033871	ENSMUSP00000033871	TRANSLATION	protein_coding	-	CCDS22175.1	1	301	0	2.7	17	203	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031482	Slc25a15	ENSMUST00000210020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040165	Cd209c	ENSMUST00000044060	ENSMUSP00000039861	TRANSLATION	protein_coding	-	CCDS22078.1	1	178	10	3.78	0.5	81.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040165	Cd209c	ENSMUST00000208902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040165	Cd209c	ENSMUST00000208622	ENSMUSP00000147005	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0.45	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040165	Cd209c	ENSMUST00000153915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040165	Cd209c	ENSMUST00000127592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048148	Nwd1	ENSMUST00000163026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048148	Nwd1	ENSMUST00000161254	ENSMUSP00000124804	TRANSLATION	protein_coding	-	CCDS22418.2	1	1521	14	5.52	0.5	80	0	-4,-5	-	-	14.808	MINOR
ENSMUSG00000048148	Nwd1	ENSMUST00000093427	ENSMUSP00000091135	TRANSLATION	protein_coding	-	-	5	1563	14	5.94	0.5	80	0	-4,-5	-	-	15.648	MINOR
ENSMUSG00000048148	Nwd1	ENSMUST00000228312	ENSMUSP00000154488	TRANSLATION	protein_coding	-	-	-	1562	14	5.52	0	119.2	0	-4,-2	-	-	17.16	PRINCIPAL:1
ENSMUSG00000048148	Nwd1	ENSMUST00000161557	ENSMUSP00000125470	TRANSLATION	nonsense_mediated_decay	-	-	1	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048148	Nwd1	ENSMUST00000160443	ENSMUSP00000124446	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048148	Nwd1	ENSMUST00000161386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048148	Nwd1	ENSMUST00000160912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048148	Nwd1	ENSMUST00000162248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031645	F11	ENSMUST00000034064	ENSMUSP00000034064	TRANSLATION	protein_coding	-	CCDS22274.1	1	624	10	13.3	1.5	386.9	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000031645	F11	ENSMUST00000210622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049184	Purg	ENSMUST00000070340	ENSMUSP00000065002	TRANSLATION	protein_coding	-	CCDS22230.1	-	350	0	0.9	0.5	362.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049184	Purg	ENSMUST00000078058	ENSMUSP00000077205	TRANSLATION	protein_coding	-	CCDS52538.1	1	325	0	0.3	1.7	304.2	0	-4,-6	-	-	4.482	MINOR
ENSMUSG00000031512	Tex29	ENSMUST00000144007	ENSMUSP00000148095	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031512	Tex29	ENSMUST00000209692	ENSMUSP00000148049	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	131.3	2	-4,-2	-	-	5.13	ALTERNATIVE:2
ENSMUSG00000031512	Tex29	ENSMUST00000132536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031512	Tex29	ENSMUST00000033909	ENSMUSP00000033909	TRANSLATION	protein_coding	-	CCDS22100.1	1	186	0	0	0.5	145.8	2	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000031512	Tex29	ENSMUST00000166638	ENSMUSP00000132090	TRANSLATION	protein_coding	-	CCDS22100.1	5	186	0	0	0.5	145.8	2	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000031512	Tex29	ENSMUST00000209704	ENSMUSP00000147894	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	96.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006587	Snai3	ENSMUST00000006762	ENSMUSP00000006762	TRANSLATION	protein_coding	-	CCDS22739.1	1	287	19	1.77	1.5	92.4	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000792	Slc5a5	ENSMUST00000000809	ENSMUSP00000000809	TRANSLATION	protein_coding	-	CCDS22385.1	1	618	0	4.325	1.5	140.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010154	Spire2	ENSMUST00000010298	ENSMUSP00000010298	TRANSLATION	protein_coding	-	CCDS22754.1	1	718	4	2.82	0.5	232	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000010154	Spire2	ENSMUST00000212404	ENSMUSP00000148710	TRANSLATION	protein_coding	-	-	1	618	4	2.15	0	141	0	-4,-5	-	-	9.112	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000126333	ENSMUSP00000118130	TRANSLATION	nonsense_mediated_decay	start	-	5	135	0	2	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000125721	ENSMUSP00000116094	TRANSLATION	protein_coding	-	-	5	1534	0	5.83	0.5	166.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000003847	Nfat5	ENSMUST00000077440	ENSMUSP00000076653	TRANSLATION	protein_coding	-	CCDS40464.1	5	1458	0	5.83	0.5	166.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000003847	Nfat5	ENSMUST00000144100	ENSMUSP00000117554	TRANSLATION	protein_coding	start	-	5	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000133026	ENSMUSP00000116631	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000149972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003847	Nfat5	ENSMUST00000148006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003847	Nfat5	ENSMUST00000151582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003847	Nfat5	ENSMUST00000169453	ENSMUSP00000127784	TRANSLATION	protein_coding	-	CCDS22648.2	5	1552	0	5.83	0.5	166.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000003847	Nfat5	ENSMUST00000154474	ENSMUSP00000115036	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000126397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003847	Nfat5	ENSMUST00000147588	ENSMUSP00000122871	TRANSLATION	protein_coding	start	-	5	1033	0	1	0	30.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003847	Nfat5	ENSMUST00000151114	ENSMUSP00000119370	TRANSLATION	protein_coding	-	CCDS22648.2	1	1552	0	5.83	0.5	166.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000003847	Nfat5	ENSMUST00000075922	ENSMUSP00000075311	TRANSLATION	protein_coding	-	CCDS72168.1	1	1225	0	5.83	0.5	166.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000063932	Poteg	ENSMUST00000081321	ENSMUSP00000080069	TRANSLATION	protein_coding	-	CCDS52535.1	1	473	0	5.17	0.5	91.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063932	Poteg	ENSMUST00000211657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039199	Zdhhc1	ENSMUST00000044286	ENSMUSP00000036471	TRANSLATION	protein_coding	-	CCDS22603.1	1	484	6	0	0.5	125.6	3	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039199	Zdhhc1	ENSMUST00000212538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039199	Zdhhc1	ENSMUST00000212303	ENSMUSP00000148381	TRANSLATION	protein_coding	-	CCDS22603.1	1	484	6	0	0.5	125.6	3	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039199	Zdhhc1	ENSMUST00000212109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031503	Col4a2	ENSMUST00000033899	ENSMUSP00000033899	TRANSLATION	protein_coding	-	CCDS40220.1	1	1707	0	18.96	1.5	614.1	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031503	Col4a2	ENSMUST00000145295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031503	Col4a2	ENSMUST00000146219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031535	Dkk4	ENSMUST00000033936	ENSMUSP00000033936	TRANSLATION	protein_coding	-	CCDS22180.1	1	221	0	1	5.1	80.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000031971	Ccsap	ENSMUST00000122421	ENSMUSP00000113319	TRANSLATION	protein_coding	-	CCDS22763.1	1	252	0	0	1.5	319.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031971	Ccsap	ENSMUST00000034452	ENSMUSP00000034452	TRANSLATION	protein_coding	-	CCDS22763.1	1	252	0	0	1.5	319.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031805	Jak3	ENSMUST00000110013	ENSMUSP00000105640	TRANSLATION	protein_coding	-	CCDS22403.1	1	1100	2	20.48	1.5	431.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031805	Jak3	ENSMUST00000110012	ENSMUSP00000105639	TRANSLATION	protein_coding	-	CCDS22403.1	5	1100	2	20.48	1.5	431.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031805	Jak3	ENSMUST00000133263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031805	Jak3	ENSMUST00000051995	ENSMUSP00000060073	TRANSLATION	protein_coding	-	CCDS22403.1	1	1100	2	20.48	1.5	431.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031805	Jak3	ENSMUST00000130624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031788	Kifc3	ENSMUST00000212786	ENSMUSP00000148654	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000212656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031788	Kifc3	ENSMUST00000212842	ENSMUSP00000148788	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000169748	ENSMUSP00000126784	TRANSLATION	protein_coding	-	CCDS52639.1	1	778	18	7.8	0.5	333.5	0	-4,-7	-	-	15.912	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000211854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031788	Kifc3	ENSMUST00000212076	ENSMUSP00000148502	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000212787	ENSMUSP00000148754	TRANSLATION	protein_coding	stop	-	2	188	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000213004	ENSMUSP00000148425	TRANSLATION	protein_coding	-	CCDS52638.1	1	687	18	8.13	2.9	357.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031788	Kifc3	ENSMUST00000212424	ENSMUSP00000148488	TRANSLATION	protein_coding	stop	-	3	133	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000034240	ENSMUSP00000034240	TRANSLATION	protein_coding	-	CCDS52640.1	1	824	18	8.13	2.9	357.3	0	-4,0	-	-	18	PRINCIPAL:4
ENSMUSG00000031788	Kifc3	ENSMUST00000212554	ENSMUSP00000148774	TRANSLATION	protein_coding	stop	-	2	200	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031788	Kifc3	ENSMUST00000169353	ENSMUSP00000127427	TRANSLATION	protein_coding	-	-	1	709	18	8.13	0	357.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000045128	Rpl18a	ENSMUST00000212378	ENSMUSP00000148743	TRANSLATION	protein_coding	stop	-	3	123	0	0	0	129.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045128	Rpl18a	ENSMUST00000212796	ENSMUSP00000148671	TRANSLATION	protein_coding	stop	-	2	219	0	0	0	189.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045128	Rpl18a	ENSMUST00000212019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045128	Rpl18a	ENSMUST00000054220	ENSMUSP00000058368	TRANSLATION	protein_coding	-	CCDS22386.1	1	176	0	0	21.5	189.4	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000045128	Rpl18a	ENSMUST00000212129	ENSMUSP00000148723	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	71.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045128	Rpl18a	ENSMUST00000212709	ENSMUSP00000148529	TRANSLATION	protein_coding	-	-	2	147	0	0	1.2	161.6	0	-4,-2	-	-	4.372	MINOR
ENSMUSG00000045128	Rpl18a	ENSMUST00000213053	ENSMUSP00000148281	TRANSLATION	nonsense_mediated_decay	-	-	3	59	3	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000045128	Rpl18a	ENSMUST00000212494	ENSMUSP00000148665	TRANSLATION	protein_coding	-	-	5	109	0	0	0	149.5	0	-4,-7	-	-	3.606	MINOR
ENSMUSG00000031465	Angpt2	ENSMUST00000033846	ENSMUSP00000033846	TRANSLATION	protein_coding	-	CCDS22125.1	1	496	9	5.8	5.2	234.3	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000031465	Angpt2	ENSMUST00000170200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031636	Pdlim3	ENSMUST00000211190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031636	Pdlim3	ENSMUST00000209216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031636	Pdlim3	ENSMUST00000034053	ENSMUSP00000034053	TRANSLATION	protein_coding	-	CCDS22281.1	1	316	9	4.6	8.8	188.6	0	-4,-7	-	-	20.562	PRINCIPAL:2
ENSMUSG00000031636	Pdlim3	ENSMUST00000210422	ENSMUSP00000148113	TRANSLATION	protein_coding	-	-	5	364	9	4.6	8.8	195.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000053490	Trim60	ENSMUST00000048565	ENSMUSP00000040299	TRANSLATION	protein_coding	-	CCDS22331.1	1	466	13	0.42	0.5	184.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036810	Cnep1r1	ENSMUST00000128290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036810	Cnep1r1	ENSMUST00000127490	ENSMUSP00000120121	TRANSLATION	nonsense_mediated_decay	-	-	2	47	0	0	0	47.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036810	Cnep1r1	ENSMUST00000131891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036810	Cnep1r1	ENSMUST00000117775	ENSMUSP00000113207	TRANSLATION	protein_coding	-	-	3	113	0	0	0	174.5	3	-4,-7	-	-	4.764	MINOR
ENSMUSG00000036810	Cnep1r1	ENSMUST00000095214	ENSMUSP00000092839	TRANSLATION	protein_coding	-	CCDS52628.1	1	125	0	0	19.5	195.1	3	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000036810	Cnep1r1	ENSMUST00000121097	ENSMUSP00000113435	TRANSLATION	protein_coding	-	-	1	106	0	0	0	134.5	3	-4,-7	-	-	2.364	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000145218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031565	Fgfr1	ENSMUST00000210846	ENSMUSP00000148032	TRANSLATION	protein_coding	stop	-	2	86	0	2.35	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000210778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031565	Fgfr1	ENSMUST00000148322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031565	Fgfr1	ENSMUST00000119398	ENSMUSP00000113855	TRANSLATION	protein_coding	-	CCDS40304.1	1	733	18	14.73	6.3	449.7	1	4,-1	-	-	12.585	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000155564	ENSMUSP00000117884	TRANSLATION	protein_coding	stop	-	3	50	0	1.1	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000167764	ENSMUSP00000131343	TRANSLATION	protein_coding	-	-	1	733	18	14.73	1.2	450.8	1	4,-1	-	-	10.299	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000211419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031565	Fgfr1	ENSMUST00000117179	ENSMUSP00000113909	TRANSLATION	protein_coding	-	CCDS57614.1	1	820	18	17.73	7.5	480.7	1	4,-1	-	-	20.598	ALTERNATIVE:1
ENSMUSG00000031565	Fgfr1	ENSMUST00000120106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031565	Fgfr1	ENSMUST00000138455	ENSMUSP00000147898	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000084027	ENSMUSP00000081041	TRANSLATION	protein_coding	-	CCDS52526.1	5	822	18	17.73	7.5	480.7	1	4,-1	-	-	20.598	PRINCIPAL:3
ENSMUSG00000031565	Fgfr1	ENSMUST00000138104	ENSMUSP00000148135	TRANSLATION	nonsense_mediated_decay	start	-	5	300	0	6.53	0	102.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000179592	ENSMUSP00000136640	TRANSLATION	protein_coding	-	-	5	833	18	17.93	0	480.7	1	3,-2	-	-	18	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000133936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031565	Fgfr1	ENSMUST00000210504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031565	Fgfr1	ENSMUST00000124228	ENSMUSP00000116564	TRANSLATION	protein_coding	stop	-	3	104	0	3.1	0	28.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031565	Fgfr1	ENSMUST00000126118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031565	Fgfr1	ENSMUST00000178276	ENSMUSP00000137515	TRANSLATION	protein_coding	-	-	5	733	18	14.73	1.2	450.8	1	4,-1	-	-	10.299	MINOR
ENSMUSG00000047654	Tssk6	ENSMUST00000050373	ENSMUSP00000062783	TRANSLATION	protein_coding	-	CCDS22354.1	-	273	16	0.8	7.5	203.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031748	Gnao1	ENSMUST00000149530	ENSMUSP00000115007	TRANSLATION	protein_coding	start	-	5	74	4	1.528	0	84.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031748	Gnao1	ENSMUST00000138659	ENSMUSP00000148550	TRANSLATION	protein_coding	-	CCDS85585.1	1	354	24	7.83	18.3	400.7	0	-4,-5	-	-	19.964	MINOR
ENSMUSG00000031748	Gnao1	ENSMUST00000127900	ENSMUSP00000116826	TRANSLATION	nonsense_mediated_decay	start	-	5	101	1	2	0	50.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031748	Gnao1	ENSMUST00000212008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031748	Gnao1	ENSMUST00000130974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031748	Gnao1	ENSMUST00000144451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031748	Gnao1	ENSMUST00000155245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031748	Gnao1	ENSMUST00000142466	ENSMUSP00000118463	TRANSLATION	protein_coding	start	-	5	109	7	2.33	0	129.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031748	Gnao1	ENSMUST00000125716	ENSMUSP00000114144	TRANSLATION	protein_coding	-	CCDS22532.1	1	354	24	8.58	19.5	405.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031748	Gnao1	ENSMUST00000125695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031748	Gnao1	ENSMUST00000034198	ENSMUSP00000034198	TRANSLATION	protein_coding	-	CCDS22532.1	1	354	24	8.58	19.5	405.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031748	Gnao1	ENSMUST00000137202	ENSMUSP00000119220	TRANSLATION	protein_coding	stop	-	3	179	10	4	0	191.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019464	Ptger1	ENSMUST00000159935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019464	Ptger1	ENSMUST00000212519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019464	Ptger1	ENSMUST00000019608	ENSMUSP00000019608	TRANSLATION	protein_coding	-	CCDS22458.1	1	405	0	0	1.5	59.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052566	Hook2	ENSMUST00000209764	ENSMUSP00000148237	TRANSLATION	protein_coding	-	-	5	692	0	4.2	0	431.2	0	-4,-7	-	-	6	MINOR
ENSMUSG00000052566	Hook2	ENSMUST00000064495	ENSMUSP00000067752	TRANSLATION	protein_coding	-	CCDS22489.1	1	716	0	4.2	3.9	913.1	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000052566	Hook2	ENSMUST00000210326	ENSMUSP00000148078	TRANSLATION	protein_coding	-	-	1	611	0	4.2	0	705.7	0	-4,-7	-	-	6	MINOR
ENSMUSG00000052566	Hook2	ENSMUST00000209652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005161	Prdx2	ENSMUST00000109734	ENSMUSP00000105356	TRANSLATION	protein_coding	-	CCDS40416.1	2	198	0	5.25	14.1	194.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005161	Prdx2	ENSMUST00000005292	ENSMUSP00000005292	TRANSLATION	protein_coding	-	CCDS40416.1	1	198	0	5.25	14.1	194.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005161	Prdx2	ENSMUST00000164807	ENSMUSP00000126451	TRANSLATION	protein_coding	-	CCDS40416.1	1	198	0	5.25	14.1	194.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005161	Prdx2	ENSMUST00000143402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005161	Prdx2	ENSMUST00000138748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005161	Prdx2	ENSMUST00000109733	ENSMUSP00000105355	TRANSLATION	protein_coding	-	CCDS40416.1	2	198	0	5.25	14.1	194.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005161	Prdx2	ENSMUST00000125893	ENSMUSP00000122694	TRANSLATION	protein_coding	stop	-	1	146	0	3.5	0	144.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005161	Prdx2	ENSMUST00000127215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031590	Frg1	ENSMUST00000210873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031590	Frg1	ENSMUST00000033999	ENSMUSP00000033999	TRANSLATION	protein_coding	-	CCDS22263.1	1	258	0	4.55	7.5	264.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000003809	Gcdh	ENSMUST00000139180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003809	Gcdh	ENSMUST00000142748	ENSMUSP00000116584	TRANSLATION	protein_coding	stop	-	2	75	0	1.014	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000003809	Gcdh	ENSMUST00000136462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003809	Gcdh	ENSMUST00000109745	ENSMUSP00000105367	TRANSLATION	protein_coding	-	-	5	438	30	9.264	0	256.4	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000003809	Gcdh	ENSMUST00000128023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003809	Gcdh	ENSMUST00000003907	ENSMUSP00000003907	TRANSLATION	protein_coding	-	CCDS22482.2	1	447	30	9.264	1.5	256.4	0	-3,1	-	-	18	PRINCIPAL:2
ENSMUSG00000034911	Ushbp1	ENSMUST00000212516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034911	Ushbp1	ENSMUST00000213000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034911	Ushbp1	ENSMUST00000049184	ENSMUSP00000045668	TRANSLATION	protein_coding	-	CCDS22393.1	1	680	0	0	1.5	90.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034911	Ushbp1	ENSMUST00000212626	ENSMUSP00000148319	TRANSLATION	nonsense_mediated_decay	-	-	1	331	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034911	Ushbp1	ENSMUST00000212496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044006	Cilp2	ENSMUST00000057831	ENSMUSP00000061544	TRANSLATION	protein_coding	-	CCDS40363.1	5	1162	0	2.52	1.5	181.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031893	Tsnaxip1	ENSMUST00000212566	ENSMUSP00000148715	TRANSLATION	protein_coding	-	-	1	626	3	0	0	101.3	0	-4,-7	-	-	9	ALTERNATIVE:2
ENSMUSG00000031893	Tsnaxip1	ENSMUST00000211949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031893	Tsnaxip1	ENSMUST00000034365	ENSMUSP00000034365	TRANSLATION	protein_coding	-	CCDS22614.1	1	704	3	0	1.5	101.3	0	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000015568	Lpl	ENSMUST00000015712	ENSMUSP00000015712	TRANSLATION	protein_coding	-	CCDS40357.1	1	474	7	4.46	3.9	528.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015568	Lpl	ENSMUST00000101463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015568	Lpl	ENSMUST00000213071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015568	Lpl	ENSMUST00000168401	ENSMUSP00000132259	TRANSLATION	nonsense_mediated_decay	-	-	1	474	7	4.46	3.9	528.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000015568	Lpl	ENSMUST00000169749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040197	Cd209e	ENSMUST00000033888	ENSMUSP00000033888	TRANSLATION	protein_coding	-	CCDS22074.1	1	208	10	3.4	1.5	80.6	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000008167	Fbxw9	ENSMUST00000152884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008167	Fbxw9	ENSMUST00000142036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008167	Fbxw9	ENSMUST00000139721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008167	Fbxw9	ENSMUST00000151962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008167	Fbxw9	ENSMUST00000125109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008167	Fbxw9	ENSMUST00000095220	ENSMUSP00000092845	TRANSLATION	protein_coding	-	CCDS40418.1	1	458	0	5.09	1.5	29	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000008167	Fbxw9	ENSMUST00000143763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008167	Fbxw9	ENSMUST00000145479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008167	Fbxw9	ENSMUST00000141183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031583	Wrn	ENSMUST00000033991	ENSMUSP00000033991	TRANSLATION	protein_coding	-	CCDS22229.1	5	1401	17	18.338	1.5	411.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031583	Wrn	ENSMUST00000033990	ENSMUSP00000033990	TRANSLATION	protein_coding	-	CCDS22229.1	1	1401	17	18.338	1.5	411.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031583	Wrn	ENSMUST00000209293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031583	Wrn	ENSMUST00000211498	ENSMUSP00000147379	TRANSLATION	protein_coding	-	-	1	1158	17	13.39	0	289.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000109523	Gdf1	ENSMUST00000207684	ENSMUSP00000146749	TRANSLATION	protein_coding	-	CCDS52571.1	1	357	0	0.6	1.5	100	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031654	Cbln1	ENSMUST00000211279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031654	Cbln1	ENSMUST00000169693	ENSMUSP00000126575	TRANSLATION	protein_coding	-	CCDS22506.1	5	193	0	2.8	7.5	93.1	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000031654	Cbln1	ENSMUST00000034076	ENSMUSP00000034076	TRANSLATION	protein_coding	-	CCDS22506.1	1	193	0	2.8	7.5	93.1	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000090336	Cfap97d2	ENSMUST00000208283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090336	Cfap97d2	ENSMUST00000209042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090336	Cfap97d2	ENSMUST00000166277	ENSMUSP00000127953	TRANSLATION	protein_coding	-	CCDS52489.1	1	98	0	0	1.7	48.6	0	-4,-2	-	-	5.652	MINOR
ENSMUSG00000090336	Cfap97d2	ENSMUST00000214337	ENSMUSP00000153486	TRANSLATION	protein_coding	-	-	5	169	0	0	0.5	51.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000059230	Defb4	ENSMUST00000081017	ENSMUSP00000079808	TRANSLATION	protein_coding	-	CCDS40254.1	1	63	0	0.7	1.5	48.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015027	Galns	ENSMUST00000212319	ENSMUSP00000148591	TRANSLATION	protein_coding	-	CCDS85625.1	1	440	13	11.05	0.5	278.4	0	3,-2	-	-	7.998	MINOR
ENSMUSG00000015027	Galns	ENSMUST00000015171	ENSMUSP00000015171	TRANSLATION	protein_coding	-	CCDS40504.1	1	520	13	13.05	6.3	409.6	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000015027	Galns	ENSMUST00000211906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045636	Mtus1	ENSMUST00000155174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045636	Mtus1	ENSMUST00000117735	ENSMUSP00000113082	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000118835	ENSMUSP00000112626	TRANSLATION	protein_coding	-	CCDS40328.1	1	1210	0	0	1.5	0	0	-4,-5	-	-	0.246	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000143853	ENSMUSP00000116339	TRANSLATION	protein_coding	start/stop	-	2	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000131965	ENSMUSP00000121605	TRANSLATION	protein_coding	stop	-	2	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000135194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045636	Mtus1	ENSMUST00000155055	ENSMUSP00000119163	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000051379	ENSMUSP00000053554	TRANSLATION	protein_coding	-	CCDS40330.1	1	440	0	0	7.1	0	0	-4,0	-	-	3	PRINCIPAL:1
ENSMUSG00000045636	Mtus1	ENSMUST00000145860	ENSMUSP00000119440	TRANSLATION	protein_coding	stop	-	1	759	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000142936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045636	Mtus1	ENSMUST00000127665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045636	Mtus1	ENSMUST00000093534	ENSMUSP00000091252	TRANSLATION	protein_coding	-	CCDS40329.1	1	520	0	0	2.7	0	0	-4,-6	-	-	0.837	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000059115	ENSMUSP00000059503	TRANSLATION	protein_coding	-	CCDS40328.1	5	1210	0	0	1.5	0	0	-4,-5	-	-	0.246	MINOR
ENSMUSG00000045636	Mtus1	ENSMUST00000155626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008874	Clec3a	ENSMUST00000009018	ENSMUSP00000009018	TRANSLATION	protein_coding	-	CCDS22690.1	1	196	10	1.845	8.4	61.7	0	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238418	ENSMUSP00000158786	TRANSLATION	protein_coding	-	CCDS40360.1	-	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238292	ENSMUSP00000158827	TRANSLATION	protein_coding	-	CCDS40360.1	-	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238408	ENSMUSP00000158615	TRANSLATION	protein_coding	-	CCDS40360.1	-	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054648	Zfp869	ENSMUST00000238460	ENSMUSP00000158648	TRANSLATION	protein_coding	stop	-	-	173	3	1.85	0	71.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054648	Zfp869	ENSMUST00000238367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054648	Zfp869	ENSMUST00000238311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054648	Zfp869	ENSMUST00000238459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054648	Zfp869	ENSMUST00000238535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054648	Zfp869	ENSMUST00000238761	ENSMUSP00000158604	TRANSLATION	protein_coding	stop	-	-	75	0	1.7	0	71.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054648	Zfp869	ENSMUST00000080987	ENSMUSP00000079780	TRANSLATION	protein_coding	-	CCDS40360.1	5	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238657	ENSMUSP00000158663	TRANSLATION	protein_coding	-	CCDS40360.1	-	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238753	ENSMUSP00000158685	TRANSLATION	protein_coding	-	CCDS40360.1	-	529	51	2.45	0.5	300.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054648	Zfp869	ENSMUST00000238201	ENSMUSP00000158726	TRANSLATION	protein_coding	start	-	-	77	0	1	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031549	Ido2	ENSMUST00000121992	ENSMUSP00000113979	TRANSLATION	protein_coding	-	CCDS40298.2	1	405	18	7.5	1.5	402.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031549	Ido2	ENSMUST00000138335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031549	Ido2	ENSMUST00000140417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031549	Ido2	ENSMUST00000138155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031796	Cfap20	ENSMUST00000212807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031796	Cfap20	ENSMUST00000212579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031796	Cfap20	ENSMUST00000211908	ENSMUSP00000148668	TRANSLATION	protein_coding	stop	-	5	103	0	0	0	168	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031796	Cfap20	ENSMUST00000034249	ENSMUSP00000034249	TRANSLATION	protein_coding	-	CCDS40445.1	1	193	0	0	17.3	320.3	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000031796	Cfap20	ENSMUST00000212731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031796	Cfap20	ENSMUST00000212684	ENSMUSP00000148527	TRANSLATION	nonsense_mediated_decay	-	-	1	62	0	0	0	38.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031796	Cfap20	ENSMUST00000212131	ENSMUSP00000148415	TRANSLATION	nonsense_mediated_decay	start	-	3	37	0	0	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031796	Cfap20	ENSMUST00000213086	ENSMUSP00000148651	TRANSLATION	protein_coding	-	-	2	187	0	0	0	258.8	0	-4,-6	-	-	2.31	MINOR
ENSMUSG00000074449	Gm15319	ENSMUST00000084046	ENSMUSP00000081059	TRANSLATION	protein_coding	-	CCDS52499.1	1	350	0	3.03	0.5	92.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031832	Taf1c	ENSMUST00000212929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031832	Taf1c	ENSMUST00000144379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031832	Taf1c	ENSMUST00000093099	ENSMUSP00000090789	TRANSLATION	protein_coding	-	CCDS40493.1	1	836	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031832	Taf1c	ENSMUST00000131652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031832	Taf1c	ENSMUST00000147964	ENSMUSP00000118480	TRANSLATION	nonsense_mediated_decay	-	-	1	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031832	Taf1c	ENSMUST00000126547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031665	Sall1	ENSMUST00000034090	ENSMUSP00000034090	TRANSLATION	protein_coding	-	CCDS40427.1	1	1323	35	0	0.5	156.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031729	Ist1	ENSMUST00000212170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031729	Ist1	ENSMUST00000212973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031729	Ist1	ENSMUST00000212562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031729	Ist1	ENSMUST00000034164	ENSMUSP00000034164	TRANSLATION	protein_coding	-	CCDS22655.1	1	362	0	4.5	6.5	208.3	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000019470	Xab2	ENSMUST00000159909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019470	Xab2	ENSMUST00000019614	ENSMUSP00000019614	TRANSLATION	protein_coding	-	CCDS22065.1	1	855	0	18.83	7.5	28.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019470	Xab2	ENSMUST00000159235	ENSMUSP00000124237	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019470	Xab2	ENSMUST00000163038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019470	Xab2	ENSMUST00000159548	ENSMUSP00000124202	TRANSLATION	protein_coding	start/stop	-	5	285	0	6.25	0	16.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046258	Adam29	ENSMUST00000053441	ENSMUSP00000054292	TRANSLATION	protein_coding	-	CCDS22311.1	1	763	17	0.32	0.5	401.5	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000025810	Nrp1	ENSMUST00000212746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025810	Nrp1	ENSMUST00000212933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025810	Nrp1	ENSMUST00000026917	ENSMUSP00000026917	TRANSLATION	protein_coding	-	CCDS22790.1	1	923	10	13.29	5.1	679.1	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000025810	Nrp1	ENSMUST00000212833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031519	Asb5	ENSMUST00000239152	ENSMUSP00000159156	TRANSLATION	protein_coding	-	-	-	120	0	2.5	0	71.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000031519	Asb5	ENSMUST00000239166	ENSMUSP00000159077	TRANSLATION	protein_coding	-	-	-	305	0	6.25	1.5	176.9	0	-4,-5	-	-	11.274	MINOR
ENSMUSG00000031519	Asb5	ENSMUST00000239106	ENSMUSP00000158922	TRANSLATION	protein_coding	-	-	-	284	0	6.7	8.4	176.9	0	-4,-5	-	-	14.58	ALTERNATIVE:1
ENSMUSG00000031519	Asb5	ENSMUST00000209937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031519	Asb5	ENSMUST00000033918	ENSMUSP00000033918	TRANSLATION	protein_coding	-	CCDS22307.1	1	329	0	6.25	9.6	176.9	0	-4,-7	-	-	14.1	PRINCIPAL:2
ENSMUSG00000037738	Nek5	ENSMUST00000169834	ENSMUSP00000126705	TRANSLATION	protein_coding	-	CCDS52518.1	1	614	20	6.15	0.5	228.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000037738	Nek5	ENSMUST00000210824	ENSMUSP00000147849	TRANSLATION	nonsense_mediated_decay	start	-	1	237	10	4.9	0	169	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000037738	Nek5	ENSMUST00000209656	ENSMUSP00000148211	TRANSLATION	protein_coding	-	CCDS85511.1	1	627	20	6.15	0.5	228.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000037738	Nek5	ENSMUST00000213644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079016	Gm11034	ENSMUST00000109987	ENSMUSP00000105614	TRANSLATION	protein_coding	start/stop	-	5	30	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025521	Tmem192	ENSMUST00000209852	ENSMUSP00000147788	TRANSLATION	protein_coding	-	-	1	258	0	0	0	220.5	7	-4,-6	-	-	2.76	MINOR
ENSMUSG00000025521	Tmem192	ENSMUST00000026595	ENSMUSP00000026595	TRANSLATION	protein_coding	-	CCDS22329.1	1	266	0	0	1.5	274.5	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025521	Tmem192	ENSMUST00000209923	ENSMUSP00000148175	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025521	Tmem192	ENSMUST00000211405	ENSMUSP00000147585	TRANSLATION	nonsense_mediated_decay	start	-	2	108	0	0	0	62.3	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000025521	Tmem192	ENSMUST00000079896	ENSMUSP00000078819	TRANSLATION	protein_coding	-	CCDS52559.1	1	221	0	0	0.5	209.3	2	-4,-6	-	-	2.088	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000033995	ENSMUSP00000033995	TRANSLATION	protein_coding	-	CCDS40318.1	1	220	0	3.95	7.5	45	0	-4,-5	-	-	14.295	PRINCIPAL:4
ENSMUSG00000031586	Rbpms	ENSMUST00000182184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031586	Rbpms	ENSMUST00000182871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031586	Rbpms	ENSMUST00000182256	ENSMUSP00000138140	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0.45	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000191473	ENSMUSP00000140387	TRANSLATION	protein_coding	-	CCDS40317.1	1	197	0	3.95	9.5	45	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000031586	Rbpms	ENSMUST00000183122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031586	Rbpms	ENSMUST00000033994	ENSMUSP00000033994	TRANSLATION	protein_coding	-	CCDS72112.1	1	191	0	3.95	1.5	45	0	-4,-5	-	-	12.177	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000182926	ENSMUSP00000138361	TRANSLATION	nonsense_mediated_decay	start	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000183062	ENSMUSP00000138726	TRANSLATION	protein_coding	stop	-	3	64	0	0.45	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000183336	ENSMUSP00000138533	TRANSLATION	nonsense_mediated_decay	start	-	3	70	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000053251	ENSMUSP00000055813	TRANSLATION	protein_coding	-	CCDS40317.1	1	197	0	3.95	9.5	45	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000031586	Rbpms	ENSMUST00000183088	ENSMUSP00000138420	TRANSLATION	protein_coding	stop	-	5	159	0	3.2	0	45	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000231786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031586	Rbpms	ENSMUST00000182987	ENSMUSP00000138483	TRANSLATION	nonsense_mediated_decay	-	-	1	197	0	3.95	9.5	45	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031586	Rbpms	ENSMUST00000231942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031731	Ap1g1	ENSMUST00000093157	ENSMUSP00000090844	TRANSLATION	protein_coding	-	CCDS40475.1	5	825	5	19.5	11.3	636.5	0	-4,-2	-	-	19.814	PRINCIPAL:3
ENSMUSG00000031731	Ap1g1	ENSMUST00000179104	ENSMUSP00000136724	TRANSLATION	protein_coding	-	-	-	49	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000031731	Ap1g1	ENSMUST00000172892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031731	Ap1g1	ENSMUST00000034171	ENSMUSP00000034171	TRANSLATION	protein_coding	-	CCDS80929.1	1	822	5	19.5	10	639.6	0	-4,-2	-	-	19.622	ALTERNATIVE:1
ENSMUSG00000031731	Ap1g1	ENSMUST00000173476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031731	Ap1g1	ENSMUST00000173200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013160	Atp6v0d1	ENSMUST00000144486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013160	Atp6v0d1	ENSMUST00000013304	ENSMUSP00000013304	TRANSLATION	protein_coding	-	CCDS22604.1	1	351	0	6.18	19.5	386.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000007721	Ccdc124	ENSMUST00000212680	ENSMUSP00000148322	TRANSLATION	protein_coding	stop	-	2	25	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007721	Ccdc124	ENSMUST00000007865	ENSMUSP00000007865	TRANSLATION	protein_coding	-	CCDS22384.1	1	217	0	0	1.5	111.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038291	Snx25	ENSMUST00000110377	ENSMUSP00000106006	TRANSLATION	nonsense_mediated_decay	-	-	5	142	0	0	0	69.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038291	Snx25	ENSMUST00000041582	ENSMUSP00000035785	TRANSLATION	protein_coding	-	CCDS22287.2	5	840	0	2.3	1.5	320.4	0	-4,-5	-	-	11.94	PRINCIPAL:2
ENSMUSG00000038291	Snx25	ENSMUST00000150645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038291	Snx25	ENSMUST00000110378	ENSMUSP00000106007	TRANSLATION	protein_coding	-	-	5	986	0	2.3	0.5	321.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000038291	Snx25	ENSMUST00000176410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038291	Snx25	ENSMUST00000136097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038291	Snx25	ENSMUST00000177186	ENSMUSP00000134949	TRANSLATION	protein_coding	start	-	3	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038291	Snx25	ENSMUST00000170416	ENSMUSP00000127640	TRANSLATION	protein_coding	-	CCDS22287.2	5	840	0	2.3	1.5	320.4	0	-4,-5	-	-	11.94	PRINCIPAL:2
ENSMUSG00000038291	Snx25	ENSMUST00000144244	ENSMUSP00000148177	TRANSLATION	protein_coding	start/stop	-	5	149	0	0.42	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031539	Ap3m2	ENSMUST00000210148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031539	Ap3m2	ENSMUST00000210476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031539	Ap3m2	ENSMUST00000210656	ENSMUSP00000147967	TRANSLATION	protein_coding	-	CCDS22184.1	1	418	0	6.97	19.5	275.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031539	Ap3m2	ENSMUST00000163739	ENSMUSP00000128446	TRANSLATION	protein_coding	-	CCDS22184.1	1	418	0	6.97	19.5	275.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000019478	Rab4a	ENSMUST00000212846	ENSMUSP00000148777	TRANSLATION	nonsense_mediated_decay	start	-	3	96	8	2.11	0	73	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019478	Rab4a	ENSMUST00000117702	ENSMUSP00000113401	TRANSLATION	protein_coding	-	CCDS52703.1	1	218	22	5.93	10.8	197.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000019478	Rab4a	ENSMUST00000118535	ENSMUSP00000113886	TRANSLATION	protein_coding	-	CCDS52703.1	1	218	22	5.93	10.8	197.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000040631	Dok4	ENSMUST00000212810	ENSMUSP00000148355	TRANSLATION	protein_coding	-	CCDS40443.1	1	325	0	3.45	9.5	102.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040631	Dok4	ENSMUST00000211892	ENSMUSP00000148825	TRANSLATION	protein_coding	stop	-	3	39	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040631	Dok4	ENSMUST00000046461	ENSMUSP00000043554	TRANSLATION	protein_coding	-	CCDS40443.1	1	325	0	3.45	9.5	102.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040631	Dok4	ENSMUST00000212745	ENSMUSP00000148698	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046691	Chtf8	ENSMUST00000176090	ENSMUSP00000135221	TRANSLATION	protein_coding	-	-	5	102	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046691	Chtf8	ENSMUST00000177068	ENSMUSP00000135029	TRANSLATION	protein_coding	-	CCDS57643.1	1	121	0	0	8.8	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000046691	Chtf8	ENSMUST00000175940	ENSMUSP00000135077	TRANSLATION	protein_coding	-	CCDS57643.1	1	121	0	0	8.8	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000046691	Chtf8	ENSMUST00000176515	ENSMUSP00000135688	TRANSLATION	protein_coding	-	-	2	102	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047495	Dlgap2	ENSMUST00000152652	ENSMUSP00000123078	TRANSLATION	protein_coding	-	CCDS52491.1	1	1060	0	2.16	1.7	535.7	0	-4,-6	-	-	11.875	PRINCIPAL:4
ENSMUSG00000047495	Dlgap2	ENSMUST00000133298	ENSMUSP00000119613	TRANSLATION	protein_coding	-	CCDS52492.1	1	1059	0	2.16	3.9	535.7	0	-4,-5	-	-	12.634	ALTERNATIVE:2
ENSMUSG00000047495	Dlgap2	ENSMUST00000136000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047495	Dlgap2	ENSMUST00000043279	ENSMUSP00000039647	TRANSLATION	protein_coding	-	CCDS52492.1	5	1059	0	2.16	3.9	535.7	0	-4,-5	-	-	12.634	ALTERNATIVE:2
ENSMUSG00000047495	Dlgap2	ENSMUST00000150247	ENSMUSP00000123104	TRANSLATION	protein_coding	-	-	5	1045	0	2.16	1.8	541.8	0	-4,-5	-	-	12.276	ALTERNATIVE:2
ENSMUSG00000047495	Dlgap2	ENSMUST00000141214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047495	Dlgap2	ENSMUST00000141155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047495	Dlgap2	ENSMUST00000129119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047495	Dlgap2	ENSMUST00000137130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031447	Lamp1	ENSMUST00000209709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031447	Lamp1	ENSMUST00000033824	ENSMUSP00000033824	TRANSLATION	protein_coding	-	CCDS22106.1	1	406	0	4.75	0.5	384.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000036879	Phkb	ENSMUST00000160731	ENSMUSP00000125051	TRANSLATION	protein_coding	start	-	1	314	0	0	0	73.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036879	Phkb	ENSMUST00000159882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036879	Phkb	ENSMUST00000160611	ENSMUSP00000125690	TRANSLATION	nonsense_mediated_decay	-	-	1	169	0	0	0	82.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036879	Phkb	ENSMUST00000162981	ENSMUSP00000124522	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036879	Phkb	ENSMUST00000159716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036879	Phkb	ENSMUST00000162305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036879	Phkb	ENSMUST00000161850	ENSMUSP00000124939	TRANSLATION	protein_coding	stop	-	5	206	0	0	0	128.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036879	Phkb	ENSMUST00000162464	ENSMUSP00000125197	TRANSLATION	protein_coding	stop	-	3	163	0	0	0	81.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036879	Phkb	ENSMUST00000053771	ENSMUSP00000050788	TRANSLATION	protein_coding	-	CCDS22501.1	1	1085	0	0	5.1	364.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000031883	Car7	ENSMUST00000056051	ENSMUSP00000052136	TRANSLATION	protein_coding	-	CCDS22581.1	1	264	6	7	13	332	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031883	Car7	ENSMUST00000159416	ENSMUSP00000125112	TRANSLATION	protein_coding	-	CCDS80920.1	1	208	6	5.5	3.9	269.7	0	-4,-5	-	-	12.23	MINOR
ENSMUSG00000031883	Car7	ENSMUST00000212942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031883	Car7	ENSMUST00000162761	ENSMUSP00000125404	TRANSLATION	protein_coding	-	CCDS80920.1	1	208	6	5.5	3.9	269.7	0	-4,-5	-	-	12.23	MINOR
ENSMUSG00000031883	Car7	ENSMUST00000162399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094443	Sgo2b	ENSMUST00000210915	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000094443	Sgo2b	ENSMUST00000179944	ENSMUSP00000136323	TRANSLATION	protein_coding	-	CCDS57623.1	5	1167	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000048500	Defb15	ENSMUST00000062586	ENSMUSP00000059763	TRANSLATION	protein_coding	-	CCDS40288.1	1	79	0	1	0.5	27.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000061847	Defb39	ENSMUST00000075504	ENSMUSP00000074947	TRANSLATION	protein_coding	-	CCDS22130.1	1	74	0	0	1.5	47.1	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000065987	Cd209b	ENSMUST00000084086	ENSMUSP00000081104	TRANSLATION	protein_coding	-	CCDS22077.1	1	325	17	4.05	0.5	75.5	1	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000065987	Cd209b	ENSMUST00000111014	ENSMUSP00000106643	TRANSLATION	nonsense_mediated_decay	-	-	1	195	0	0.72	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000065987	Cd209b	ENSMUST00000188386	ENSMUSP00000140695	TRANSLATION	protein_coding	-	CCDS72089.1	1	316	17	4.05	0.5	72.1	0	-4,-5	-	-	17.73	MINOR
ENSMUSG00000065987	Cd209b	ENSMUST00000171635	ENSMUSP00000126070	TRANSLATION	protein_coding	-	CCDS22076.1	1	295	17	4.05	0.5	75.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000003316	Glg1	ENSMUST00000169020	ENSMUSP00000131355	TRANSLATION	protein_coding	-	CCDS22671.1	1	1175	0	0	1.5	734.9	1	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000003316	Glg1	ENSMUST00000003404	ENSMUSP00000003404	TRANSLATION	protein_coding	stop	-	5	1163	0	0	0	725.1	1	2,-3	-	-	-1	MINOR
ENSMUSG00000003316	Glg1	ENSMUST00000168741	ENSMUSP00000130327	TRANSLATION	protein_coding	start	-	1	591	0	0	0	388.9	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000003316	Glg1	ENSMUST00000164283	ENSMUSP00000131659	TRANSLATION	nonsense_mediated_decay	-	-	5	302	0	0	0	84.3	0	2,-3	-	-	-1	MINOR
ENSMUSG00000045246	Kcng4	ENSMUST00000164382	ENSMUSP00000129687	TRANSLATION	protein_coding	-	CCDS22710.1	5	506	0	1.04	1.5	217	3	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045246	Kcng4	ENSMUST00000061828	ENSMUSP00000056552	TRANSLATION	protein_coding	-	CCDS22710.1	1	506	0	1.04	1.5	217	3	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043251	Exoc3l	ENSMUST00000212974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043251	Exoc3l	ENSMUST00000212261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043251	Exoc3l	ENSMUST00000212777	ENSMUSP00000148327	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043251	Exoc3l	ENSMUST00000212138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043251	Exoc3l	ENSMUST00000212359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043251	Exoc3l	ENSMUST00000057855	ENSMUSP00000053766	TRANSLATION	protein_coding	-	CCDS22597.1	1	739	0	4.18	1.5	380.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043251	Exoc3l	ENSMUST00000212215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039785	Defb5	ENSMUST00000110763	ENSMUSP00000106391	TRANSLATION	protein_coding	-	CCDS40257.1	1	64	0	0	0.5	32.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000064213	Defa24	ENSMUST00000080533	ENSMUSP00000079376	TRANSLATION	protein_coding	-	CCDS40281.1	1	93	0	0	1.5	119.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000091490	Triml2	ENSMUST00000211228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091490	Triml2	ENSMUST00000210136	ENSMUSP00000148196	TRANSLATION	protein_coding	-	CCDS52546.1	1	424	7	3.298	0.5	89.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091490	Triml2	ENSMUST00000163869	ENSMUSP00000132971	TRANSLATION	protein_coding	-	CCDS52546.1	5	424	7	3.298	0.5	89.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091490	Triml2	ENSMUST00000209200	ENSMUSP00000147371	TRANSLATION	protein_coding	-	CCDS52546.1	1	424	7	3.298	0.5	89.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091490	Triml2	ENSMUST00000209872	ENSMUSP00000148027	TRANSLATION	protein_coding	-	-	1	377	7	2.698	0	89.7	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000062380	Tubb3	ENSMUST00000071134	ENSMUSP00000071134	TRANSLATION	protein_coding	-	CCDS22757.1	1	450	20	4.5	11.8	376.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000062380	Tubb3	ENSMUST00000212743	ENSMUSP00000148662	TRANSLATION	protein_coding	-	-	3	122	5	2.5	0	76	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000031849	Comp	ENSMUST00000212488	ENSMUSP00000148712	TRANSLATION	protein_coding	start	-	2	109	6	2	0	171.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031849	Comp	ENSMUST00000212439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031849	Comp	ENSMUST00000003659	ENSMUSP00000003659	TRANSLATION	protein_coding	-	CCDS22367.1	1	755	131	15.56	1.5	693.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031849	Comp	ENSMUST00000213072	ENSMUSP00000148626	TRANSLATION	nonsense_mediated_decay	start	-	3	81	12	1.25	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031749	St3gal2	ENSMUST00000117534	ENSMUSP00000113900	TRANSLATION	protein_coding	-	-	1	303	11	3.966	0	219.6	0	1,-4	-	-	8.256	MINOR
ENSMUSG00000031749	St3gal2	ENSMUST00000141464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031749	St3gal2	ENSMUST00000129639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031749	St3gal2	ENSMUST00000034197	ENSMUSP00000034197	TRANSLATION	protein_coding	-	CCDS22667.1	1	350	17	4.9	8.8	284.2	0	1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000031749	St3gal2	ENSMUST00000138332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062181	Ces3b	ENSMUST00000093221	ENSMUSP00000090909	TRANSLATION	protein_coding	-	CCDS22590.2	1	571	6	10.93	0.5	519.5	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000062181	Ces3b	ENSMUST00000173088	ENSMUSP00000134204	TRANSLATION	nonsense_mediated_decay	start	-	5	122	1	1.81	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062181	Ces3b	ENSMUST00000173838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062181	Ces3b	ENSMUST00000074403	ENSMUSP00000074004	TRANSLATION	protein_coding	-	CCDS52653.1	1	521	5	9.76	0.5	458.6	0	0,-4	-	-	11.004	MINOR
ENSMUSG00000019732	Calr3	ENSMUST00000109974	ENSMUSP00000105601	TRANSLATION	protein_coding	-	CCDS40388.1	1	272	1	3.995	0.5	66	0	-4,-5	-	-	2.728	MINOR
ENSMUSG00000019732	Calr3	ENSMUST00000019876	ENSMUSP00000019876	TRANSLATION	protein_coding	-	CCDS22413.1	1	380	5	6.52	1.5	153	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000055368	Slc6a2	ENSMUST00000072939	ENSMUSP00000072709	TRANSLATION	protein_coding	-	CCDS22525.1	1	617	8	11.95	6.5	796.8	10	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000055368	Slc6a2	ENSMUST00000165470	ENSMUSP00000129869	TRANSLATION	protein_coding	-	CCDS22525.1	1	617	8	11.95	6.5	796.8	10	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000031972	Acta1	ENSMUST00000212584	ENSMUSP00000148594	TRANSLATION	protein_coding	stop	-	2	151	7	2	0	192.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031972	Acta1	ENSMUST00000034453	ENSMUSP00000034453	TRANSLATION	protein_coding	-	CCDS22764.1	1	377	24	6	21.5	498.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004630	Pcp2	ENSMUST00000136105	ENSMUSP00000121079	TRANSLATION	protein_coding	-	CCDS52471.1	1	136	0	0.92	2.7	73.8	0	-4,-5	-	-	12.786	MINOR
ENSMUSG00000004630	Pcp2	ENSMUST00000133459	ENSMUSP00000122902	TRANSLATION	protein_coding	-	CCDS52470.1	1	120	0	0.92	7.5	73.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000004630	Pcp2	ENSMUST00000144977	ENSMUSP00000146399	TRANSLATION	protein_coding	-	-	3	104	0	0.92	0	73.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000004630	Pcp2	ENSMUST00000004749	ENSMUSP00000004749	TRANSLATION	protein_coding	-	CCDS22066.1	1	99	0	0.32	2.7	35.1	0	-4,-5	-	-	5.73	MINOR
ENSMUSG00000004630	Pcp2	ENSMUST00000128566	ENSMUSP00000146683	TRANSLATION	protein_coding	-	-	2	114	0	0.92	0	73.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000004630	Pcp2	ENSMUST00000145855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004630	Pcp2	ENSMUST00000142431	ENSMUSP00000121403	TRANSLATION	protein_coding	-	CCDS22066.1	2	99	0	0.32	2.7	35.1	0	-4,-5	-	-	5.73	MINOR
ENSMUSG00000013155	Enkd1	ENSMUST00000212162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013155	Enkd1	ENSMUST00000212716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013155	Enkd1	ENSMUST00000013299	ENSMUSP00000013299	TRANSLATION	protein_coding	-	CCDS22610.1	1	346	0	0	7.5	80.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000013155	Enkd1	ENSMUST00000212061	ENSMUSP00000148814	TRANSLATION	nonsense_mediated_decay	-	-	1	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037101	Ttc29	ENSMUST00000124713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037101	Ttc29	ENSMUST00000143157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037101	Ttc29	ENSMUST00000137424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037101	Ttc29	ENSMUST00000109902	ENSMUSP00000105528	TRANSLATION	protein_coding	-	CCDS22428.1	5	471	0	2.67	1.5	34.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037101	Ttc29	ENSMUST00000156432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037101	Ttc29	ENSMUST00000117845	ENSMUSP00000112445	TRANSLATION	protein_coding	-	-	1	59	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000037101	Ttc29	ENSMUST00000049395	ENSMUSP00000041919	TRANSLATION	protein_coding	-	CCDS22428.1	1	471	0	2.67	1.5	34.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037101	Ttc29	ENSMUST00000126172	ENSMUSP00000122383	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000110332	Gm19935	ENSMUST00000209208	ENSMUSP00000147921	TRANSLATION	protein_coding	-	-	1	52	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037437	Adam32	ENSMUST00000174059	ENSMUSP00000134680	TRANSLATION	nonsense_mediated_decay	start	-	5	173	0	0	0	91.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000037437	Adam32	ENSMUST00000173069	ENSMUSP00000133631	TRANSLATION	protein_coding	start	-	5	80	0	0.82	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037437	Adam32	ENSMUST00000121438	ENSMUSP00000113627	TRANSLATION	protein_coding	-	CCDS40300.2	1	754	14	8.25	0.5	471.8	0	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000037437	Adam32	ENSMUST00000140573	ENSMUSP00000133843	TRANSLATION	protein_coding	start	-	3	74	5	1.2	0	30.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037437	Adam32	ENSMUST00000119720	ENSMUSP00000113076	TRANSLATION	protein_coding	-	CCDS80867.1	1	677	14	7.85	0.5	471.8	0	3,-2	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000037437	Adam32	ENSMUST00000156719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037437	Adam32	ENSMUST00000133088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037437	Adam32	ENSMUST00000173559	ENSMUSP00000134478	TRANSLATION	nonsense_mediated_decay	start	-	3	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034467	Dynlrb2	ENSMUST00000213007	ENSMUSP00000148749	TRANSLATION	protein_coding	-	-	1	85	0	1.75	0	86.2	0	-4,-5	-	-	10.422	MINOR
ENSMUSG00000034467	Dynlrb2	ENSMUST00000078170	ENSMUSP00000077301	TRANSLATION	protein_coding	-	CCDS40487.1	1	96	0	2.08	21.5	96.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051839	Gypa	ENSMUST00000063359	ENSMUSP00000070836	TRANSLATION	protein_coding	-	CCDS40399.1	1	168	0	0.95	0.5	168.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000210538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000047783	ENSMUSP00000042702	TRANSLATION	protein_coding	-	CCDS22520.1	1	1264	0	5.69	1.5	226.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000209564	ENSMUSP00000147763	TRANSLATION	protein_coding	start	-	2	77	0	0	2.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000209616	ENSMUSP00000147300	TRANSLATION	protein_coding	start/stop	-	3	253	0	1	0	165.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000132757	ENSMUSP00000120818	TRANSLATION	protein_coding	stop	-	1	78	0	0	2.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000136198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000139113	ENSMUSP00000118230	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033282	Rpgrip1l	ENSMUST00000211185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031871	Cdh5	ENSMUST00000034339	ENSMUSP00000034339	TRANSLATION	protein_coding	-	CCDS22572.1	1	784	44	8.31	4.1	400.5	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000031871	Cdh5	ENSMUST00000209911	ENSMUSP00000147286	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000031723	Txnl4b	ENSMUST00000178445	ENSMUSP00000137524	TRANSLATION	protein_coding	-	CCDS40469.1	1	149	0	3	18.3	185.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031723	Txnl4b	ENSMUST00000034159	ENSMUSP00000034159	TRANSLATION	protein_coding	-	CCDS40469.1	1	149	0	3	18.3	185.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002341	Ncan	ENSMUST00000002412	ENSMUSP00000002412	TRANSLATION	protein_coding	-	CCDS22358.1	1	1268	19	4.55	0.5	376.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031696	Vps35	ENSMUST00000211154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031696	Vps35	ENSMUST00000209277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031696	Vps35	ENSMUST00000211479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031696	Vps35	ENSMUST00000209228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031696	Vps35	ENSMUST00000034131	ENSMUSP00000034131	TRANSLATION	protein_coding	-	CCDS40421.1	1	796	0	15.75	15	993.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035770	Dync1li2	ENSMUST00000212343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035770	Dync1li2	ENSMUST00000212230	ENSMUSP00000148716	TRANSLATION	protein_coding	start	-	5	406	12	3.33	0	725.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035770	Dync1li2	ENSMUST00000212148	ENSMUSP00000148372	TRANSLATION	nonsense_mediated_decay	start	-	3	53	0	0.75	0	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035770	Dync1li2	ENSMUST00000212654	ENSMUSP00000148681	TRANSLATION	nonsense_mediated_decay	-	-	1	470	19	4.08	0	833.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035770	Dync1li2	ENSMUST00000211804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035770	Dync1li2	ENSMUST00000041769	ENSMUSP00000045480	TRANSLATION	protein_coding	-	CCDS22579.1	1	492	19	4.08	6.3	866.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000035770	Dync1li2	ENSMUST00000212040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035770	Dync1li2	ENSMUST00000212678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051095	Olfr986	ENSMUST00000062229	ENSMUSP00000056713	TRANSLATION	protein_coding	-	CCDS23078.1	-	312	0	0.36	6.4	182	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051095	Olfr986	ENSMUST00000214763	ENSMUSP00000151130	TRANSLATION	protein_coding	-	CCDS23078.1	5	312	0	0.36	6.4	182	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051095	Olfr986	ENSMUST00000216720	ENSMUSP00000149030	TRANSLATION	protein_coding	-	CCDS23078.1	5	312	0	0.36	6.4	182	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051095	Olfr986	ENSMUST00000218134	ENSMUSP00000152019	TRANSLATION	protein_coding	-	CCDS23078.1	5	312	0	0.36	6.4	182	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038884	Shfl	ENSMUST00000176990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038884	Shfl	ENSMUST00000176142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038884	Shfl	ENSMUST00000043911	ENSMUSP00000045384	TRANSLATION	protein_coding	-	CCDS22885.1	1	290	4	0	2.7	413.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000038884	Shfl	ENSMUST00000177067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038884	Shfl	ENSMUST00000175820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019039	Dalrd3	ENSMUST00000193044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019039	Dalrd3	ENSMUST00000191897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019039	Dalrd3	ENSMUST00000019183	ENSMUSP00000019183	TRANSLATION	protein_coding	-	CCDS40769.1	1	538	0	0	1.5	78.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019039	Dalrd3	ENSMUST00000192651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019039	Dalrd3	ENSMUST00000193427	ENSMUSP00000141748	TRANSLATION	protein_coding	start/stop	-	3	193	0	0	0	41.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019039	Dalrd3	ENSMUST00000195249	ENSMUSP00000141451	TRANSLATION	nonsense_mediated_decay	-	-	3	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019039	Dalrd3	ENSMUST00000192518	ENSMUSP00000142061	TRANSLATION	protein_coding	start	-	5	49	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019039	Dalrd3	ENSMUST00000191881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019039	Dalrd3	ENSMUST00000193846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049624	Slc17a5	ENSMUST00000117645	ENSMUSP00000113003	TRANSLATION	protein_coding	-	CCDS72283.1	1	469	0	2.775	0.5	166.6	12	-4,-5	-	-	9.768	MINOR
ENSMUSG00000049624	Slc17a5	ENSMUST00000119213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049624	Slc17a5	ENSMUST00000052441	ENSMUSP00000056182	TRANSLATION	protein_coding	-	CCDS23364.1	1	495	0	2.79	3.9	203.3	13	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000032204	Aqp9	ENSMUST00000113570	ENSMUSP00000109200	TRANSLATION	protein_coding	-	CCDS23325.1	5	295	0	4.46	5.1	177.3	10	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032204	Aqp9	ENSMUST00000144618	ENSMUSP00000116785	TRANSLATION	nonsense_mediated_decay	-	-	1	192	0	2.82	0	97.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000032204	Aqp9	ENSMUST00000138364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032204	Aqp9	ENSMUST00000153050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032204	Aqp9	ENSMUST00000060917	ENSMUSP00000050127	TRANSLATION	protein_coding	-	CCDS72270.1	1	321	0	3.86	0.5	156.9	10	1,-4	-	-	9.576	MINOR
ENSMUSG00000032204	Aqp9	ENSMUST00000074465	ENSMUSP00000074063	TRANSLATION	protein_coding	-	CCDS23325.1	1	295	0	4.46	5.1	177.3	10	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032204	Aqp9	ENSMUST00000133239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032204	Aqp9	ENSMUST00000136798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032204	Aqp9	ENSMUST00000135892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032204	Aqp9	ENSMUST00000139495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032316	Clk3	ENSMUST00000215158	ENSMUSP00000150411	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032316	Clk3	ENSMUST00000216095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032316	Clk3	ENSMUST00000065330	ENSMUSP00000067341	TRANSLATION	protein_coding	-	CCDS23232.1	1	638	20	9.66	1.5	158.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032316	Clk3	ENSMUST00000217409	ENSMUSP00000149179	TRANSLATION	nonsense_mediated_decay	start	-	3	191	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032316	Clk3	ENSMUST00000213417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032316	Clk3	ENSMUST00000215109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032316	Clk3	ENSMUST00000215233	ENSMUSP00000150048	TRANSLATION	protein_coding	start	-	1	478	20	8.87	0	138.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032316	Clk3	ENSMUST00000215333	ENSMUSP00000149250	TRANSLATION	protein_coding	start/stop	-	5	263	10	6.46	0	109	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032316	Clk3	ENSMUST00000216192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032594	Ip6k1	ENSMUST00000175908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032594	Ip6k1	ENSMUST00000176613	ENSMUSP00000135587	TRANSLATION	protein_coding	start	-	1	31	0	0.5	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032594	Ip6k1	ENSMUST00000035214	ENSMUSP00000035214	TRANSLATION	protein_coding	-	CCDS23514.1	1	433	12	2.46	1.5	217.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032594	Ip6k1	ENSMUST00000176566	ENSMUSP00000135350	TRANSLATION	nonsense_mediated_decay	start	-	3	41	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032594	Ip6k1	ENSMUST00000175874	ENSMUSP00000135747	TRANSLATION	protein_coding	stop	-	5	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032594	Ip6k1	ENSMUST00000177158	ENSMUSP00000134754	TRANSLATION	protein_coding	start	-	3	235	7	1.3	0	84.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032594	Ip6k1	ENSMUST00000177396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032594	Ip6k1	ENSMUST00000176854	ENSMUSP00000141232	TRANSLATION	protein_coding	-	-	1	145	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032594	Ip6k1	ENSMUST00000167159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032594	Ip6k1	ENSMUST00000164395	ENSMUSP00000128534	TRANSLATION	nonsense_mediated_decay	-	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020258	Glyctk	ENSMUST00000162562	ENSMUSP00000125392	TRANSLATION	protein_coding	stop	-	5	126	0	0.44	0	52.9	0	-3,0	-	-	-1	MINOR
ENSMUSG00000020258	Glyctk	ENSMUST00000217417	ENSMUSP00000150455	TRANSLATION	protein_coding	start	-	5	133	0	0.6	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020258	Glyctk	ENSMUST00000159809	ENSMUSP00000125369	TRANSLATION	protein_coding	stop	-	3	92	0	0.2	0	28.5	0	-3,0	-	-	-1	MINOR
ENSMUSG00000020258	Glyctk	ENSMUST00000112543	ENSMUSP00000108162	TRANSLATION	protein_coding	-	CCDS23469.1	1	523	0	3.62	3.9	402.6	0	-3,0	-	-	13	PRINCIPAL:1
ENSMUSG00000020258	Glyctk	ENSMUST00000036382	ENSMUSP00000047761	TRANSLATION	protein_coding	-	CCDS23469.1	1	523	0	3.62	3.9	402.6	0	-3,0	-	-	13	PRINCIPAL:1
ENSMUSG00000052336	Cx3cr1	ENSMUST00000215016	ENSMUSP00000150463	TRANSLATION	protein_coding	-	CCDS40806.1	5	354	0	0.8	5.1	166.2	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000052336	Cx3cr1	ENSMUST00000177637	ENSMUSP00000136413	TRANSLATION	protein_coding	-	CCDS40806.1	5	354	0	0.8	5.1	166.2	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000052336	Cx3cr1	ENSMUST00000064165	ENSMUSP00000063986	TRANSLATION	protein_coding	-	CCDS40806.1	1	354	0	0.8	5.1	166.2	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000037716	Ccdc33	ENSMUST00000119665	ENSMUSP00000112613	TRANSLATION	protein_coding	-	CCDS81006.1	1	730	0	0	0.5	29	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037716	Ccdc33	ENSMUST00000098681	ENSMUSP00000096278	TRANSLATION	protein_coding	-	-	1	278	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000037716	Ccdc33	ENSMUST00000144887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037716	Ccdc33	ENSMUST00000151404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037716	Ccdc33	ENSMUST00000042205	ENSMUSP00000040899	TRANSLATION	protein_coding	-	CCDS40654.1	1	731	0	0	0.5	29	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000037716	Ccdc33	ENSMUST00000146741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037716	Ccdc33	ENSMUST00000098682	ENSMUSP00000096279	TRANSLATION	protein_coding	-	CCDS52811.1	1	985	0	0	0.5	29	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037716	Ccdc33	ENSMUST00000143797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037716	Ccdc33	ENSMUST00000215944	ENSMUSP00000149337	TRANSLATION	protein_coding	-	-	5	950	0	0	0	29	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037716	Ccdc33	ENSMUST00000123746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091537	Tma7	ENSMUST00000192801	ENSMUSP00000142209	TRANSLATION	protein_coding	-	-	3	39	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000091537	Tma7	ENSMUST00000192442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091537	Tma7	ENSMUST00000167504	ENSMUSP00000133026	TRANSLATION	protein_coding	-	CCDS52930.1	1	64	0	0	7.1	103.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000091537	Tma7	ENSMUST00000193868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038750	Omt2b	ENSMUST00000187890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038750	Omt2b	ENSMUST00000186336	ENSMUSP00000140239	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038750	Omt2b	ENSMUST00000043734	ENSMUSP00000036132	TRANSLATION	protein_coding	-	CCDS52869.1	2	119	0	0	0.5	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000038750	Omt2b	ENSMUST00000189243	ENSMUSP00000140732	TRANSLATION	nonsense_mediated_decay	start	-	2	91	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000038750	Omt2b	ENSMUST00000187667	ENSMUSP00000139767	TRANSLATION	protein_coding	-	CCDS52869.1	1	119	0	0	0.5	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000047193	Dync2h1	ENSMUST00000216097	ENSMUSP00000149764	TRANSLATION	protein_coding	start/stop	-	5	596	33	11.83	0	151.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047193	Dync2h1	ENSMUST00000147193	ENSMUSP00000116679	TRANSLATION	protein_coding	-	-	5	4313	64	66.34	4.1	1877.9	0	-4,-5	-	-	19.026	ALTERNATIVE:2
ENSMUSG00000047193	Dync2h1	ENSMUST00000140466	ENSMUSP00000120007	TRANSLATION	protein_coding	-	CCDS40528.1	5	4306	64	66.34	5.1	1886	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000047193	Dync2h1	ENSMUST00000147056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047193	Dync2h1	ENSMUST00000048417	ENSMUSP00000046733	TRANSLATION	protein_coding	-	CCDS40528.1	1	4306	64	66.34	5.1	1886	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000047193	Dync2h1	ENSMUST00000139115	ENSMUSP00000120322	TRANSLATION	protein_coding	-	-	1	916	0	0	0	130.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047193	Dync2h1	ENSMUST00000139671	ENSMUSP00000116242	TRANSLATION	nonsense_mediated_decay	start	-	1	385	15	7.73	0	92.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047193	Dync2h1	ENSMUST00000152934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047193	Dync2h1	ENSMUST00000214191	ENSMUSP00000149482	TRANSLATION	nonsense_mediated_decay	start	-	5	426	20	8.33	0	102.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058398	Prss43	ENSMUST00000077549	ENSMUSP00000076752	TRANSLATION	protein_coding	-	CCDS23574.1	1	382	5	2.88	0.5	186	0	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000044454	Olfr867	ENSMUST00000216538	ENSMUSP00000150378	TRANSLATION	protein_coding	-	CCDS22869.1	5	331	0	0.84	1.5	170.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044454	Olfr867	ENSMUST00000060780	ENSMUSP00000057469	TRANSLATION	protein_coding	-	CCDS22869.1	-	331	0	0.84	1.5	170.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044454	Olfr867	ENSMUST00000212098	ENSMUSP00000148667	TRANSLATION	protein_coding	-	-	3	213	0	0.36	0	92.1	3	-4,-6	-	-	3.864	MINOR
ENSMUSG00000058173	Smco4	ENSMUST00000178999	ENSMUSP00000136432	TRANSLATION	protein_coding	-	CCDS22838.1	1	59	0	0	15.8	100.3	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000058173	Smco4	ENSMUST00000215907	ENSMUSP00000150121	TRANSLATION	protein_coding	-	CCDS22838.1	1	59	0	0	15.8	100.3	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000058173	Smco4	ENSMUST00000045620	ENSMUSP00000044228	TRANSLATION	protein_coding	-	CCDS22838.1	1	59	0	0	15.8	100.3	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032108	Pate6	ENSMUST00000034619	ENSMUSP00000034619	TRANSLATION	protein_coding	-	CCDS40577.1	1	106	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000041528	Rnf123	ENSMUST00000159526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000174504	ENSMUSP00000134087	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000162355	ENSMUSP00000125745	TRANSLATION	protein_coding	-	CCDS81072.1	1	1320	8	5.46	0.5	129.3	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000041528	Rnf123	ENSMUST00000160249	ENSMUSP00000124548	TRANSLATION	protein_coding	-	CCDS52922.1	5	1314	8	5.46	1.7	129.3	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000041528	Rnf123	ENSMUST00000159306	ENSMUSP00000125695	TRANSLATION	nonsense_mediated_decay	start	-	1	261	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000162152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041528	Rnf123	ENSMUST00000159523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000178267	ENSMUSP00000136953	TRANSLATION	protein_coding	-	CCDS52922.1	5	1314	8	5.46	1.7	129.3	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000041528	Rnf123	ENSMUST00000159372	ENSMUSP00000123933	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000162753	ENSMUSP00000124824	TRANSLATION	nonsense_mediated_decay	start	-	3	61	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000160649	ENSMUSP00000125495	TRANSLATION	protein_coding	stop	-	1	1239	0	3.71	0	92.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000162516	ENSMUSP00000124986	TRANSLATION	protein_coding	stop	-	5	59	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041528	Rnf123	ENSMUST00000047746	ENSMUSP00000040803	TRANSLATION	protein_coding	-	-	5	1320	8	5.26	0.5	129.3	0	-4,-2	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000041528	Rnf123	ENSMUST00000162123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000159136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000161673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000160841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041528	Rnf123	ENSMUST00000161828	ENSMUSP00000125213	TRANSLATION	protein_coding	stop	-	2	111	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032110	Acrv1	ENSMUST00000034620	ENSMUSP00000034620	TRANSLATION	protein_coding	-	CCDS22971.1	1	261	0	0	0.5	0	0	2,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000032110	Acrv1	ENSMUST00000184160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074502	Ubtfl1	ENSMUST00000164441	ENSMUSP00000129611	TRANSLATION	protein_coding	-	CCDS40540.1	1	394	0	0.2	0.5	61.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074502	Ubtfl1	ENSMUST00000098973	ENSMUSP00000096572	TRANSLATION	protein_coding	-	CCDS40540.1	-	394	0	0.2	0.5	61.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074502	Ubtfl1	ENSMUST00000169398	ENSMUSP00000126540	TRANSLATION	protein_coding	-	CCDS40540.1	1	394	0	0.2	0.5	61.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036814	Slc6a20a	ENSMUST00000040960	ENSMUSP00000047690	TRANSLATION	protein_coding	-	CCDS40817.1	1	592	11	8.71	5.4	583.8	16	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000036814	Slc6a20a	ENSMUST00000170591	ENSMUSP00000132700	TRANSLATION	protein_coding	start/stop	-	5	240	11	4.64	0	250.5	6	0,-3	-	-	-1	MINOR
ENSMUSG00000036814	Slc6a20a	ENSMUST00000171647	ENSMUSP00000129107	TRANSLATION	protein_coding	-	-	5	555	11	7.71	1.2	277.1	14	-4,-6	-	-	10.092	MINOR
ENSMUSG00000037977	6430571L13Rik	ENSMUST00000135520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037977	6430571L13Rik	ENSMUST00000042581	ENSMUSP00000047093	TRANSLATION	protein_coding	-	CCDS23489.1	1	164	0	0	3.9	0	0	-4,-6	-	-	1	PRINCIPAL:1
ENSMUSG00000032518	Rpsa	ENSMUST00000217352	ENSMUSP00000149650	TRANSLATION	nonsense_mediated_decay	start	-	3	93	0	1.948	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032518	Rpsa	ENSMUST00000217356	ENSMUSP00000150804	TRANSLATION	nonsense_mediated_decay	-	-	1	133	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032518	Rpsa	ENSMUST00000215568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032518	Rpsa	ENSMUST00000216813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032518	Rpsa	ENSMUST00000035105	ENSMUSP00000035105	TRANSLATION	protein_coding	-	CCDS23623.1	1	295	0	7.08	14.8	97.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032518	Rpsa	ENSMUST00000217317	ENSMUSP00000148933	TRANSLATION	protein_coding	-	CCDS23623.1	1	295	0	7.08	14.8	97.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000094535	Olfr850	ENSMUST00000077347	ENSMUSP00000076569	TRANSLATION	protein_coding	-	CCDS22858.1	-	315	0	0.42	5.1	173.7	5	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000094535	Olfr850	ENSMUST00000211832	ENSMUSP00000148623	TRANSLATION	protein_coding	-	-	-	312	0	0.42	5.1	173.7	5	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000051238	Swsap1	ENSMUST00000053583	ENSMUSP00000060331	TRANSLATION	protein_coding	-	CCDS52739.1	1	278	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000070311	Olfr894	ENSMUST00000093866	ENSMUSP00000091389	TRANSLATION	protein_coding	-	CCDS23001.1	-	313	0	0.28	1.5	158.3	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000070311	Olfr894	ENSMUST00000212992	ENSMUSP00000148501	TRANSLATION	protein_coding	-	-	5	310	0	0.28	1.5	158.3	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000032507	Fbxl2	ENSMUST00000127352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032507	Fbxl2	ENSMUST00000117537	ENSMUSP00000114075	TRANSLATION	nonsense_mediated_decay	-	-	2	423	0	6.85	10.8	112.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032507	Fbxl2	ENSMUST00000139757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032507	Fbxl2	ENSMUST00000035090	ENSMUSP00000035090	TRANSLATION	protein_coding	-	CCDS40790.1	1	423	0	6.85	10.8	112.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032507	Fbxl2	ENSMUST00000141832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032507	Fbxl2	ENSMUST00000143180	ENSMUSP00000117058	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000187625	ENSMUSP00000139951	TRANSLATION	protein_coding	-	CCDS57667.1	1	733	0	10.13	0.5	146.2	4	-4,-6	-	-	10.998	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000187182	ENSMUSP00000140219	TRANSLATION	protein_coding	-	CCDS80973.1	1	777	0	10.33	0.5	146.2	4	3,-2	-	-	11.4	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000115148	ENSMUSP00000110801	TRANSLATION	protein_coding	-	CCDS40574.1	5	766	0	10.23	8.8	146.2	4	0,-4	-	-	14.202	PRINCIPAL:1
ENSMUSG00000032036	Kirrel3	ENSMUST00000188658	ENSMUSP00000140086	TRANSLATION	protein_coding	start	-	1	239	0	3.84	0	40.9	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000183580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032036	Kirrel3	ENSMUST00000184203	ENSMUSP00000139393	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000188933	ENSMUSP00000139418	TRANSLATION	protein_coding	-	-	1	745	0	10.63	2	146.2	4	-4,-6	-	-	12.384	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000190549	ENSMUSP00000139714	TRANSLATION	protein_coding	-	-	1	579	0	10.13	0	146.2	4	-4,-6	-	-	10.998	MINOR
ENSMUSG00000032036	Kirrel3	ENSMUST00000045091	ENSMUSP00000048863	TRANSLATION	protein_coding	-	CCDS57667.1	1	733	0	10.13	0.5	146.2	4	-4,-6	-	-	10.998	MINOR
ENSMUSG00000054792	Klhl18	ENSMUST00000200256	ENSMUSP00000142820	TRANSLATION	protein_coding	start/stop	-	3	216	0	3.45	0	164.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054792	Klhl18	ENSMUST00000199700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054792	Klhl18	ENSMUST00000068025	ENSMUSP00000069674	TRANSLATION	protein_coding	-	CCDS23567.1	1	574	0	10.11	9.8	543.7	0	-4,-5	-	-	14.994	PRINCIPAL:2
ENSMUSG00000054792	Klhl18	ENSMUST00000198164	ENSMUSP00000143634	TRANSLATION	protein_coding	-	-	1	579	0	10.11	9.8	543.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000054792	Klhl18	ENSMUST00000198400	ENSMUSP00000143384	TRANSLATION	protein_coding	-	-	1	509	0	8.76	0	486.1	0	-4,-5	-	-	5.838	MINOR
ENSMUSG00000054792	Klhl18	ENSMUST00000198327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054792	Klhl18	ENSMUST00000197336	ENSMUSP00000143717	TRANSLATION	nonsense_mediated_decay	start	-	1	197	0	2.78	0	111.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032578	Cish	ENSMUST00000085102	ENSMUSP00000082183	TRANSLATION	protein_coding	-	CCDS40761.1	1	257	0	2.77	5.1	86.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032578	Cish	ENSMUST00000168260	ENSMUSP00000127523	TRANSLATION	protein_coding	-	-	1	62	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032578	Cish	ENSMUST00000171568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032578	Cish	ENSMUST00000165664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032578	Cish	ENSMUST00000167072	ENSMUSP00000129941	TRANSLATION	protein_coding	stop	-	5	102	0	1.32	0	23	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032420	Nt5e	ENSMUST00000217134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032420	Nt5e	ENSMUST00000186789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032420	Nt5e	ENSMUST00000187166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032420	Nt5e	ENSMUST00000034992	ENSMUSP00000034992	TRANSLATION	protein_coding	-	CCDS23386.1	1	576	11	9	5.1	194.3	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000035200	Chrnb4	ENSMUST00000034854	ENSMUSP00000034854	TRANSLATION	protein_coding	-	CCDS23200.1	1	495	0	4.7	1.5	518.8	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000070324	Fbxw22	ENSMUST00000080626	ENSMUSP00000079460	TRANSLATION	protein_coding	-	CCDS40772.1	1	466	0	1.54	0.5	40.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000070324	Fbxw22	ENSMUST00000197213	ENSMUSP00000142792	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	1.3	0	40.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036912	Piwil4	ENSMUST00000115644	ENSMUSP00000111308	TRANSLATION	protein_coding	-	-	5	911	8	14.34	0.5	417.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000036912	Piwil4	ENSMUST00000136399	ENSMUSP00000120851	TRANSLATION	protein_coding	start	-	1	174	1	2.6	0	171.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036912	Piwil4	ENSMUST00000076946	ENSMUSP00000076213	TRANSLATION	protein_coding	-	CCDS22824.1	2	878	8	12.52	0.5	359.4	0	-4,0	-	-	10.872	MINOR
ENSMUSG00000036912	Piwil4	ENSMUST00000115643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095390	Olfr229	ENSMUST00000214904	ENSMUSP00000149063	TRANSLATION	protein_coding	-	CCDS23065.1	5	307	0	0.36	6.4	172.3	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000095390	Olfr229	ENSMUST00000076802	ENSMUSP00000076080	TRANSLATION	protein_coding	-	CCDS23065.1	-	307	0	0.36	6.4	172.3	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000034275	Igsf9b	ENSMUST00000133213	ENSMUSP00000117017	TRANSLATION	protein_coding	-	CCDS52746.1	5	1328	0	10.35	0.5	244	1	1,-3	-	-	12	MINOR
ENSMUSG00000034275	Igsf9b	ENSMUST00000214187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034275	Igsf9b	ENSMUST00000214357	ENSMUSP00000149356	TRANSLATION	protein_coding	-	-	5	1441	0	10.35	6.4	242.6	1	1,-3	-	-	13.916	PRINCIPAL:1
ENSMUSG00000034275	Igsf9b	ENSMUST00000115247	ENSMUSP00000110902	TRANSLATION	protein_coding	-	-	1	722	0	10.35	0	244	0	1,-3	-	-	12	MINOR
ENSMUSG00000032174	Icam5	ENSMUST00000019616	ENSMUSP00000019616	TRANSLATION	protein_coding	-	CCDS22891.1	1	917	0	7.18	1.5	92.8	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000066750	Olfr876	ENSMUST00000215287	ENSMUSP00000149930	TRANSLATION	protein_coding	-	CCDS22988.1	5	310	0	0.28	8.8	160.7	4	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000066750	Olfr876	ENSMUST00000086064	ENSMUSP00000083231	TRANSLATION	protein_coding	-	CCDS22988.1	-	310	0	0.28	8.8	160.7	4	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000066750	Olfr876	ENSMUST00000213368	ENSMUSP00000150696	TRANSLATION	nonsense_mediated_decay	-	-	5	310	0	0.28	8.8	160.7	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000048758	Rpl29	ENSMUST00000217081	ENSMUSP00000150339	TRANSLATION	protein_coding	stop	-	2	68	0	0	0	97.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048758	Rpl29	ENSMUST00000150576	ENSMUSP00000117834	TRANSLATION	protein_coding	-	CCDS23476.1	1	160	0	0	0.5	97.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048758	Rpl29	ENSMUST00000059802	ENSMUSP00000080203	TRANSLATION	protein_coding	-	CCDS23476.1	1	160	0	0	0.5	97.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048758	Rpl29	ENSMUST00000213448	ENSMUSP00000149722	TRANSLATION	protein_coding	stop	-	2	140	0	0	0	97.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048758	Rpl29	ENSMUST00000098994	ENSMUSP00000096592	TRANSLATION	protein_coding	-	CCDS23476.1	2	160	0	0	0.5	97.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048758	Rpl29	ENSMUST00000214067	ENSMUSP00000150846	TRANSLATION	protein_coding	start	-	5	94	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049719	Prss46	ENSMUST00000176403	ENSMUSP00000135787	TRANSLATION	protein_coding	-	CCDS23576.2	1	314	8	2.84	1.5	180.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049719	Prss46	ENSMUST00000119427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032436	Cmtm7	ENSMUST00000214604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032436	Cmtm7	ENSMUST00000216760	ENSMUSP00000149591	TRANSLATION	protein_coding	-	-	1	63	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032436	Cmtm7	ENSMUST00000217056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032436	Cmtm7	ENSMUST00000084867	ENSMUSP00000081927	TRANSLATION	protein_coding	-	CCDS57709.1	1	134	0	0	0.5	0	3	-4,-7	-	-	0	MINOR
ENSMUSG00000032436	Cmtm7	ENSMUST00000035009	ENSMUSP00000035009	TRANSLATION	protein_coding	-	CCDS57710.1	1	167	0	0	1.5	55.9	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032000	Birc3	ENSMUST00000161642	ENSMUSP00000125512	TRANSLATION	nonsense_mediated_decay	start	-	5	138	0	2.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032000	Birc3	ENSMUST00000013949	ENSMUSP00000013949	TRANSLATION	protein_coding	-	CCDS22812.2	1	602	20	8.43	2.7	346.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032000	Birc3	ENSMUST00000161099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032000	Birc3	ENSMUST00000159672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032000	Birc3	ENSMUST00000159323	ENSMUSP00000125652	TRANSLATION	protein_coding	stop	-	2	175	4	1.13	0	75.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032000	Birc3	ENSMUST00000115672	ENSMUSP00000111336	TRANSLATION	protein_coding	-	-	1	376	12	4.08	0	227.4	0	-4,-5	-	-	0.666	MINOR
ENSMUSG00000032000	Birc3	ENSMUST00000115673	ENSMUSP00000111337	TRANSLATION	protein_coding	stop	-	2	168	4	0.8	0	75.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042396	Rbm7	ENSMUST00000213276	ENSMUSP00000149397	TRANSLATION	protein_coding	-	-	2	158	0	2.87	0	67.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042396	Rbm7	ENSMUST00000170000	ENSMUSP00000126374	TRANSLATION	protein_coding	-	CCDS23155.1	1	265	0	2.87	4.1	67.9	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000042396	Rbm7	ENSMUST00000214923	ENSMUSP00000150767	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042396	Rbm7	ENSMUST00000213525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060583	Olfr881	ENSMUST00000074611	ENSMUSP00000074193	TRANSLATION	protein_coding	-	CCDS22992.1	-	314	0	0.28	1.5	156	5	-4,-6	-	-	12.186	MINOR
ENSMUSG00000060583	Olfr881	ENSMUST00000212489	ENSMUSP00000148535	TRANSLATION	protein_coding	-	-	3	309	0	0.28	6.4	156	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000010054	Tusc2	ENSMUST00000193292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010054	Tusc2	ENSMUST00000193418	ENSMUSP00000141635	TRANSLATION	protein_coding	-	-	3	102	0	0	0	113	0	-4,-2	-	-	4.068	MINOR
ENSMUSG00000010054	Tusc2	ENSMUST00000010198	ENSMUSP00000010198	TRANSLATION	protein_coding	-	CCDS23495.1	1	110	0	0	6.3	145.2	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000036244	Tbc1d21	ENSMUST00000213847	ENSMUSP00000150275	TRANSLATION	nonsense_mediated_decay	-	-	1	309	0	3.96	0	72.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036244	Tbc1d21	ENSMUST00000040217	ENSMUSP00000037525	TRANSLATION	protein_coding	-	CCDS40655.1	1	336	0	5.31	8.8	76.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032310	Cyp1a2	ENSMUST00000215792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032310	Cyp1a2	ENSMUST00000034860	ENSMUSP00000034860	TRANSLATION	protein_coding	-	CCDS23229.1	1	513	29	5.75	1.5	349.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000058444	Map2k5	ENSMUST00000216999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058444	Map2k5	ENSMUST00000034920	ENSMUSP00000034920	TRANSLATION	protein_coding	-	CCDS23269.1	1	448	19	12.649	11	260.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000058444	Map2k5	ENSMUST00000213604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094269	Olfr951	ENSMUST00000078531	ENSMUSP00000077615	TRANSLATION	protein_coding	-	CCDS23044.1	-	314	0	0.32	4	176.5	5	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000094269	Olfr951	ENSMUST00000216107	ENSMUSP00000150976	TRANSLATION	protein_coding	-	-	3	311	0	0.32	2.8	176.5	5	-4,-5	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000094992	Fbxw25	ENSMUST00000163839	ENSMUSP00000128652	TRANSLATION	protein_coding	-	-	1	466	0	3.08	0.5	39.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040325	Dcaf1	ENSMUST00000161758	ENSMUSP00000125730	TRANSLATION	protein_coding	-	-	5	1512	0	9.085	0	0	0	-4,-5	-	-	5.67	MINOR
ENSMUSG00000040325	Dcaf1	ENSMUST00000159645	ENSMUSP00000123865	TRANSLATION	protein_coding	-	CCDS23485.1	1	1419	0	7.25	1.5	0	0	-4,-5	-	-	2.23	MINOR
ENSMUSG00000040325	Dcaf1	ENSMUST00000188343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040325	Dcaf1	ENSMUST00000055009	ENSMUSP00000060025	TRANSLATION	protein_coding	-	-	5	1506	0	9.25	5.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040325	Dcaf1	ENSMUST00000163657	ENSMUSP00000131135	TRANSLATION	protein_coding	start	-	5	36	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095186	Gm10718	ENSMUST00000099046	ENSMUSP00000096645	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000098590	Gm1113	ENSMUST00000183573	ENSMUSP00000146390	TRANSLATION	protein_coding	-	-	5	776	0	2.88	0	75.4	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032583	Mon1a	ENSMUST00000191906	ENSMUSP00000141516	TRANSLATION	protein_coding	-	-	2	461	0	0.4	0	374.8	0	-4,-6	-	-	6.42	MINOR
ENSMUSG00000032583	Mon1a	ENSMUST00000035202	ENSMUSP00000035202	TRANSLATION	protein_coding	-	CCDS23508.1	1	556	0	0.4	6.3	467.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051705	Senp8	ENSMUST00000216045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051705	Senp8	ENSMUST00000213257	ENSMUSP00000150192	TRANSLATION	protein_coding	stop	-	2	190	5	1	0	45.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051705	Senp8	ENSMUST00000163586	ENSMUSP00000129441	TRANSLATION	protein_coding	-	CCDS23254.1	1	221	5	2	0.5	46.1	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000051705	Senp8	ENSMUST00000217093	ENSMUSP00000150601	TRANSLATION	protein_coding	-	CCDS23254.1	1	221	5	2	0.5	46.1	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000051705	Senp8	ENSMUST00000051039	ENSMUSP00000054509	TRANSLATION	protein_coding	-	CCDS23254.1	1	221	5	2	0.5	46.1	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000051705	Senp8	ENSMUST00000177963	ENSMUSP00000137228	TRANSLATION	protein_coding	-	CCDS23254.1	1	221	5	2	0.5	46.1	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000051705	Senp8	ENSMUST00000216329	ENSMUSP00000149463	TRANSLATION	protein_coding	-	CCDS52819.1	1	234	5	2	0.5	46.1	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000047412	Zbtb44	ENSMUST00000216649	ENSMUSP00000149386	TRANSLATION	protein_coding	-	CCDS40568.1	1	435	8	2.15	1.7	154	0	-4,-7	-	-	10.574	MINOR
ENSMUSG00000047412	Zbtb44	ENSMUST00000217092	ENSMUSP00000149969	TRANSLATION	protein_coding	-	-	5	616	14	2.83	12.8	191	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000047412	Zbtb44	ENSMUST00000213202	ENSMUSP00000150226	TRANSLATION	nonsense_mediated_decay	start	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047412	Zbtb44	ENSMUST00000214585	ENSMUSP00000149121	TRANSLATION	protein_coding	start	-	5	595	14	2.63	0	191	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047412	Zbtb44	ENSMUST00000167346	ENSMUSP00000133109	TRANSLATION	protein_coding	-	CCDS40568.1	3	435	8	2.15	1.7	154	0	-4,-7	-	-	10.574	MINOR
ENSMUSG00000047412	Zbtb44	ENSMUST00000115222	ENSMUSP00000110877	TRANSLATION	protein_coding	-	CCDS52747.1	5	453	8	2.35	12.8	154	0	-4,-7	-	-	14.758	MINOR
ENSMUSG00000096427	Olfr895	ENSMUST00000212156	ENSMUSP00000148605	TRANSLATION	protein_coding	-	-	3	308	0	0.2	4.6	159.3	5	-4,-7	-	-	13	ALTERNATIVE:1
ENSMUSG00000096427	Olfr895	ENSMUST00000093864	ENSMUSP00000091387	TRANSLATION	protein_coding	-	CCDS23003.1	-	316	0	0.2	1.5	159.3	5	-4,-7	-	-	12.139	PRINCIPAL:2
ENSMUSG00000039607	Rbms3	ENSMUST00000239475	ENSMUSP00000159354	TRANSLATION	protein_coding	-	-	-	541	0	5.4	0	109.2	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000174276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039607	Rbms3	ENSMUST00000044901	ENSMUSP00000039706	TRANSLATION	protein_coding	-	CCDS57711.1	1	386	0	5.4	0.5	109.2	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000164018	ENSMUSP00000131371	TRANSLATION	protein_coding	-	CCDS57712.1	1	463	0	5.4	0.5	109.2	0	-4,-2	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000210659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039607	Rbms3	ENSMUST00000172564	ENSMUSP00000134528	TRANSLATION	protein_coding	stop	-	5	206	0	4.8	0	110.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039607	Rbms3	ENSMUST00000111773	ENSMUSP00000107403	TRANSLATION	protein_coding	-	CCDS52957.1	1	431	0	5.4	1.5	109.2	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000069095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039607	Rbms3	ENSMUST00000172469	ENSMUSP00000134172	TRANSLATION	protein_coding	start/stop	-	3	195	0	2.1	0	25.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039607	Rbms3	ENSMUST00000068962	ENSMUSP00000066735	TRANSLATION	protein_coding	-	CCDS40798.1	1	414	0	5.4	1.5	109.2	0	-4,-5	-	-	11.904	PRINCIPAL:3
ENSMUSG00000039607	Rbms3	ENSMUST00000173429	ENSMUSP00000133900	TRANSLATION	protein_coding	start	-	1	185	0	2.1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039607	Rbms3	ENSMUST00000174868	ENSMUSP00000133621	TRANSLATION	protein_coding	-	CCDS52956.1	1	402	0	5.4	0.5	109.2	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000111772	ENSMUSP00000107402	TRANSLATION	protein_coding	-	CCDS52955.1	1	415	0	5.4	1.5	109.2	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000039607	Rbms3	ENSMUST00000084824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032177	Pde4a	ENSMUST00000039413	ENSMUSP00000037025	TRANSLATION	protein_coding	-	CCDS22895.1	1	844	6	11.85	1.5	316.7	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000032177	Pde4a	ENSMUST00000003395	ENSMUSP00000003395	TRANSLATION	protein_coding	-	CCDS22896.1	1	610	6	8.2	0.5	316.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000032177	Pde4a	ENSMUST00000140440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032177	Pde4a	ENSMUST00000115458	ENSMUSP00000111118	TRANSLATION	protein_coding	-	CCDS80964.1	1	787	6	11.85	0.5	316.7	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000032177	Pde4a	ENSMUST00000131769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000107504	Gm35549	ENSMUST00000203176	ENSMUSP00000145415	TRANSLATION	protein_coding	-	-	5	141	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000107504	Gm35549	ENSMUST00000203656	ENSMUSP00000144807	TRANSLATION	protein_coding	-	-	5	141	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000107504	Gm35549	ENSMUST00000207349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107504	Gm35549	ENSMUST00000204619	ENSMUSP00000145500	TRANSLATION	protein_coding	-	-	5	141	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000032409	Atr	ENSMUST00000188088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000186997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000187356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000215311	ENSMUSP00000149953	TRANSLATION	protein_coding	-	CCDS52890.1	5	2641	0	4.86	1.7	477	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000032409	Atr	ENSMUST00000189602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000186061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000186127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000191269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000186524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000185473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000034980	ENSMUSP00000034980	TRANSLATION	protein_coding	-	-	5	2635	0	4.86	1.5	477	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000032409	Atr	ENSMUST00000188164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032409	Atr	ENSMUST00000190644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003309	Ap1m2	ENSMUST00000115433	ENSMUSP00000111093	TRANSLATION	protein_coding	-	CCDS52734.1	1	425	0	10.66	15	331.4	0	-4,-6	-	-	15.988	ALTERNATIVE:1
ENSMUSG00000003309	Ap1m2	ENSMUST00000213250	ENSMUSP00000150667	TRANSLATION	protein_coding	stop	-	3	224	0	5.33	0	130.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003309	Ap1m2	ENSMUST00000213762	ENSMUSP00000149196	TRANSLATION	nonsense_mediated_decay	-	-	5	195	0	4.25	0	27.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003309	Ap1m2	ENSMUST00000003397	ENSMUSP00000003397	TRANSLATION	protein_coding	-	CCDS22902.1	1	423	0	10.66	15	331.6	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000003309	Ap1m2	ENSMUST00000213483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032612	Usp4	ENSMUST00000194939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032612	Usp4	ENSMUST00000194224	ENSMUSP00000141321	TRANSLATION	nonsense_mediated_decay	-	-	1	734	4	10.7	0	342.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032612	Usp4	ENSMUST00000195608	ENSMUSP00000141411	TRANSLATION	protein_coding	start	-	3	190	2	2.3	0	38.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032612	Usp4	ENSMUST00000035237	ENSMUSP00000035237	TRANSLATION	protein_coding	-	CCDS23523.1	1	962	8	14.9	6.3	466.9	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000032612	Usp4	ENSMUST00000194959	ENSMUSP00000141368	TRANSLATION	protein_coding	-	CCDS81074.1	1	915	8	14.9	6.3	466.9	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000032612	Usp4	ENSMUST00000194034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032612	Usp4	ENSMUST00000194065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032612	Usp4	ENSMUST00000193288	ENSMUSP00000141612	TRANSLATION	protein_coding	start	-	1	394	2	3.25	0	37.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032612	Usp4	ENSMUST00000193093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032612	Usp4	ENSMUST00000192750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078307	AI593442	ENSMUST00000213843	ENSMUSP00000149128	TRANSLATION	protein_coding	stop	-	1	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078307	AI593442	ENSMUST00000098768	ENSMUSP00000096365	TRANSLATION	protein_coding	-	CCDS52795.1	1	199	0	0	2.7	0	1	-3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000078307	AI593442	ENSMUST00000213937	ENSMUSP00000149532	TRANSLATION	protein_coding	-	CCDS52795.1	2	199	0	0	2.7	0	1	-3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000041064	Pif1	ENSMUST00000152529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041064	Pif1	ENSMUST00000134538	ENSMUSP00000122060	TRANSLATION	protein_coding	-	-	1	637	9	10.5	5.8	257.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041064	Pif1	ENSMUST00000154970	ENSMUSP00000117085	TRANSLATION	nonsense_mediated_decay	-	-	1	398	9	5	0	189.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041064	Pif1	ENSMUST00000141046	ENSMUSP00000120400	TRANSLATION	protein_coding	stop	-	2	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041064	Pif1	ENSMUST00000239405	ENSMUSP00000159314	TRANSLATION	protein_coding	-	CCDS23295.1	-	650	9	10.5	0.5	257.7	0	-4,-5	-	-	18	MINOR
ENSMUSG00000041064	Pif1	ENSMUST00000047099	ENSMUSP00000049046	TRANSLATION	protein_coding	-	-	1	637	9	10.5	5.8	257.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041064	Pif1	ENSMUST00000131483	ENSMUSP00000117494	TRANSLATION	protein_coding	-	-	1	637	9	10.5	5.8	257.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041064	Pif1	ENSMUST00000152885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041064	Pif1	ENSMUST00000136205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032301	Psma4	ENSMUST00000164679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032301	Psma4	ENSMUST00000163960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032301	Psma4	ENSMUST00000034848	ENSMUSP00000034848	TRANSLATION	protein_coding	-	CCDS40643.1	1	261	4	6.5	8.3	239.3	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000032301	Psma4	ENSMUST00000171578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032301	Psma4	ENSMUST00000169008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032301	Psma4	ENSMUST00000171900	ENSMUSP00000132368	TRANSLATION	protein_coding	stop	-	3	139	3	3.75	0	159.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032301	Psma4	ENSMUST00000172407	ENSMUSP00000126844	TRANSLATION	protein_coding	stop	-	3	210	4	5.5	0	232.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031928	Mre11a	ENSMUST00000147305	ENSMUSP00000116321	TRANSLATION	protein_coding	stop	-	3	203	5	5.49	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031928	Mre11a	ENSMUST00000147676	ENSMUSP00000119999	TRANSLATION	protein_coding	start/stop	-	3	170	1	4.33	0	123.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031928	Mre11a	ENSMUST00000136568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031928	Mre11a	ENSMUST00000034405	ENSMUSP00000034405	TRANSLATION	protein_coding	-	CCDS22827.1	1	706	8	11.06	5.1	220.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031928	Mre11a	ENSMUST00000215820	ENSMUSP00000149184	TRANSLATION	protein_coding	stop	-	5	57	2	1.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031928	Mre11a	ENSMUST00000115632	ENSMUSP00000111295	TRANSLATION	protein_coding	-	CCDS80958.1	1	679	8	10.31	0.5	144.5	0	-4,-5	-	-	11.922	MINOR
ENSMUSG00000040524	Zfp609	ENSMUST00000159878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040524	Zfp609	ENSMUST00000160747	ENSMUSP00000123882	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040524	Zfp609	ENSMUST00000159109	ENSMUSP00000124089	TRANSLATION	protein_coding	-	CCDS23297.2	5	1413	4	0	7.5	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000036768	Kif15	ENSMUST00000213745	ENSMUSP00000150932	TRANSLATION	nonsense_mediated_decay	-	-	1	291	11	7.064	0	243.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000216388	ENSMUSP00000151160	TRANSLATION	protein_coding	stop	-	3	137	1	3	0	184.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000214921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000214880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000213945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000214652	ENSMUSP00000150678	TRANSLATION	protein_coding	stop	-	1	711	1	3.6	0	184.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000216491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000217612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000217415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000216730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036768	Kif15	ENSMUST00000214183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036768	Kif15	ENSMUST00000217401	ENSMUSP00000149737	TRANSLATION	protein_coding	stop	-	3	120	3	1.54	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000214311	ENSMUSP00000149313	TRANSLATION	nonsense_mediated_decay	start	-	1	202	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000216062	ENSMUSP00000149776	TRANSLATION	protein_coding	start	-	3	188	0	0	0	41.8	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000216048	ENSMUSP00000149351	TRANSLATION	nonsense_mediated_decay	start	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036768	Kif15	ENSMUST00000040717	ENSMUSP00000035490	TRANSLATION	protein_coding	-	CCDS23651.1	1	1387	11	9.4	3.9	404.6	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000036768	Kif15	ENSMUST00000215176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034563	Ccpg1	ENSMUST00000140675	ENSMUSP00000116976	TRANSLATION	protein_coding	-	CCDS72277.1	1	778	0	0	0.5	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034563	Ccpg1	ENSMUST00000150826	ENSMUSP00000122966	TRANSLATION	protein_coding	-	CCDS52855.1	1	753	0	0	0.5	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034563	Ccpg1	ENSMUST00000138466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034563	Ccpg1	ENSMUST00000124008	ENSMUSP00000121059	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034563	Ccpg1	ENSMUST00000131924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034563	Ccpg1	ENSMUST00000149551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034563	Ccpg1	ENSMUST00000156879	ENSMUSP00000117202	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034563	Ccpg1	ENSMUST00000183672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034563	Ccpg1	ENSMUST00000085350	ENSMUSP00000082458	TRANSLATION	protein_coding	-	CCDS72278.1	1	803	0	0	0.5	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034563	Ccpg1	ENSMUST00000037977	ENSMUSP00000045669	TRANSLATION	protein_coding	-	CCDS23334.1	1	638	0	0	0.5	0	1	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000031963	Bmper	ENSMUST00000214050	ENSMUSP00000149700	TRANSLATION	protein_coding	start/stop	-	5	213	0	0	0	74.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031963	Bmper	ENSMUST00000217648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031963	Bmper	ENSMUST00000071982	ENSMUSP00000071872	TRANSLATION	protein_coding	-	CCDS22929.1	1	685	0	1.75	5.2	296.1	0	-2,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000039452	Snx22	ENSMUST00000044711	ENSMUSP00000044389	TRANSLATION	protein_coding	-	CCDS40671.1	1	192	0	3.5	0.5	55.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039452	Snx22	ENSMUST00000214332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063058	Prr23a2	ENSMUST00000071302	ENSMUSP00000071270	TRANSLATION	protein_coding	-	CCDS52895.1	-	253	0	0	0.5	300.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032570	Atp2c1	ENSMUST00000176363	ENSMUSP00000135170	TRANSLATION	protein_coding	stop	-	5	230	1	4.68	0	141.6	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000177189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000176190	ENSMUSP00000135320	TRANSLATION	protein_coding	stop	-	5	208	1	4.38	0	154.1	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000176036	ENSMUSP00000135010	TRANSLATION	protein_coding	stop	-	5	177	0	3.88	0	102.7	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000038118	ENSMUSP00000039103	TRANSLATION	protein_coding	-	CCDS40752.1	1	918	18	16.632	5.9	473.6	13	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032570	Atp2c1	ENSMUST00000177293	ENSMUSP00000135802	TRANSLATION	nonsense_mediated_decay	start	-	5	786	18	13.752	0	400.7	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000177334	ENSMUSP00000134902	TRANSLATION	protein_coding	stop	-	5	111	0	2.15	0	68.3	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000176960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032570	Atp2c1	ENSMUST00000177074	ENSMUSP00000135646	TRANSLATION	protein_coding	-	-	5	887	18	16.232	2.4	460.1	12	-4,-5	-	-	16.964	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000085133	ENSMUSP00000082220	TRANSLATION	protein_coding	-	CCDS57698.1	1	952	18	16.632	2.9	473.6	13	-4,-7	-	-	18.776	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000163879	ENSMUSP00000129617	TRANSLATION	protein_coding	-	CCDS57697.1	1	669	16	12.862	0.5	317.6	10	-4,-7	-	-	4.668	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000112558	ENSMUSP00000108177	TRANSLATION	protein_coding	-	CCDS40752.1	1	918	18	16.632	5.9	473.6	13	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032570	Atp2c1	ENSMUST00000176787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000176656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000176651	ENSMUSP00000135732	TRANSLATION	protein_coding	stop	-	5	253	1	5.61	0	185.6	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000032570	Atp2c1	ENSMUST00000112557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032570	Atp2c1	ENSMUST00000175697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000177000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000186495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032570	Atp2c1	ENSMUST00000190802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032570	Atp2c1	ENSMUST00000176770	ENSMUSP00000134764	TRANSLATION	protein_coding	-	-	5	926	18	15.832	0	405.3	13	-4,-7	-	-	12.3	MINOR
ENSMUSG00000037190	Cyb561d2	ENSMUST00000194344	ENSMUSP00000141535	TRANSLATION	protein_coding	start	-	5	74	0	0	0	44.5	1	0,-3	-	-	-1	MINOR
ENSMUSG00000037190	Cyb561d2	ENSMUST00000194906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037190	Cyb561d2	ENSMUST00000194967	ENSMUSP00000142243	TRANSLATION	nonsense_mediated_decay	-	-	2	44	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000037190	Cyb561d2	ENSMUST00000041459	ENSMUSP00000044093	TRANSLATION	protein_coding	-	CCDS23491.1	1	222	0	0	10.8	120.2	5	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000037190	Cyb561d2	ENSMUST00000195235	ENSMUSP00000141723	TRANSLATION	protein_coding	-	CCDS23491.1	1	222	0	0	10.8	120.2	5	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000066456	Hmgn3	ENSMUST00000185359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066456	Hmgn3	ENSMUST00000189777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066456	Hmgn3	ENSMUST00000191105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066456	Hmgn3	ENSMUST00000190580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066456	Hmgn3	ENSMUST00000187193	ENSMUSP00000140980	TRANSLATION	protein_coding	-	-	5	128	0	0	2.4	86.2	0	-4,-5	-	-	6.507	MINOR
ENSMUSG00000066456	Hmgn3	ENSMUST00000190154	ENSMUSP00000140247	TRANSLATION	nonsense_mediated_decay	-	-	5	95	0	0	2.2	84.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066456	Hmgn3	ENSMUST00000185315	ENSMUSP00000140356	TRANSLATION	protein_coding	-	-	2	95	0	0	2.2	84.3	0	-4,-5	-	-	6.303	MINOR
ENSMUSG00000066456	Hmgn3	ENSMUST00000162246	ENSMUSP00000124278	TRANSLATION	protein_coding	-	CCDS52872.1	1	99	0	0	6.6	85.5	0	-4,-5	-	-	7.977	PRINCIPAL:4
ENSMUSG00000066456	Hmgn3	ENSMUST00000161796	ENSMUSP00000125616	TRANSLATION	protein_coding	-	CCDS52873.1	1	77	0	0	9.3	69.6	0	-4,-5	-	-	7.842	ALTERNATIVE:1
ENSMUSG00000025648	Pfkfb4	ENSMUST00000199620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025648	Pfkfb4	ENSMUST00000198763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025648	Pfkfb4	ENSMUST00000198140	ENSMUSP00000142378	TRANSLATION	protein_coding	-	CCDS23541.1	1	469	19	12.74	13.5	342.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025648	Pfkfb4	ENSMUST00000198277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025648	Pfkfb4	ENSMUST00000051873	ENSMUSP00000057197	TRANSLATION	protein_coding	-	-	1	453	17	12.24	0	313	0	-4,-7	-	-	13.908	MINOR
ENSMUSG00000025648	Pfkfb4	ENSMUST00000199184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025648	Pfkfb4	ENSMUST00000199591	ENSMUSP00000142992	TRANSLATION	nonsense_mediated_decay	-	-	1	413	14	9.33	0	342.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025648	Pfkfb4	ENSMUST00000200229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025648	Pfkfb4	ENSMUST00000196249	ENSMUSP00000143249	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025648	Pfkfb4	ENSMUST00000200015	ENSMUSP00000142339	TRANSLATION	nonsense_mediated_decay	start	-	5	95	7	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032238	Rora	ENSMUST00000034766	ENSMUSP00000034766	TRANSLATION	protein_coding	-	CCDS23314.1	1	523	8	7.75	0.5	198.2	0	-4,-5	-	-	18	MINOR
ENSMUSG00000032238	Rora	ENSMUST00000113624	ENSMUSP00000109254	TRANSLATION	protein_coding	-	CCDS72268.1	1	467	8	7.75	14.1	198.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032238	Rora	ENSMUST00000174296	ENSMUSP00000134291	TRANSLATION	nonsense_mediated_decay	start	-	5	62	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032238	Rora	ENSMUST00000132355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032238	Rora	ENSMUST00000143507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032238	Rora	ENSMUST00000140351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032399	Rpl4	ENSMUST00000034966	ENSMUSP00000034966	TRANSLATION	protein_coding	-	CCDS40667.1	1	419	0	8.45	1.5	247.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032399	Rpl4	ENSMUST00000213760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032399	Rpl4	ENSMUST00000217055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063856	Gpx1	ENSMUST00000191997	ENSMUSP00000142257	TRANSLATION	protein_coding	-	-	2	144	0	1.75	0	85.7	0	-4,-7	-	-	6.204	MINOR
ENSMUSG00000063856	Gpx1	ENSMUST00000193987	ENSMUSP00000141279	TRANSLATION	protein_coding	-	-	3	145	0	1.75	0	94.3	0	-4,-6	-	-	6.72	MINOR
ENSMUSG00000063856	Gpx1	ENSMUST00000192401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063856	Gpx1	ENSMUST00000082429	ENSMUSP00000081010	TRANSLATION	protein_coding	-	CCDS23522.1	1	201	0	2.75	1.5	145.9	0	-3,0	-	-	12	PRINCIPAL:1
ENSMUSG00000049098	Olfr147	ENSMUST00000056364	ENSMUSP00000051933	TRANSLATION	protein_coding	-	CCDS23008.1	2	317	0	0.2	2.7	161.7	4	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000049098	Olfr147	ENSMUST00000214648	ENSMUSP00000149480	TRANSLATION	protein_coding	-	-	2	314	0	0.2	2.7	161.7	4	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000032259	Drd2	ENSMUST00000075764	ENSMUSP00000075170	TRANSLATION	protein_coding	-	CCDS40615.1	1	444	0	5.4	7.5	292.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032383	Ppib	ENSMUST00000034947	ENSMUSP00000034947	TRANSLATION	protein_coding	-	CCDS23301.1	1	216	8	4.6	11.1	167.6	0	0,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000032383	Ppib	ENSMUST00000213785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032355	Mlip	ENSMUST00000184006	ENSMUSP00000139002	TRANSLATION	protein_coding	stop	-	5	270	0	0	0.5	212.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000184415	ENSMUSP00000139251	TRANSLATION	protein_coding	-	-	5	460	0	0	0	384.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032355	Mlip	ENSMUST00000183636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032355	Mlip	ENSMUST00000184106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032355	Mlip	ENSMUST00000183686	ENSMUSP00000139353	TRANSLATION	protein_coding	start	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000184848	ENSMUSP00000139242	TRANSLATION	protein_coding	-	-	1	227	0	0	0	194.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000184138	ENSMUSP00000139188	TRANSLATION	protein_coding	stop	-	3	164	0	0	0	78	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000185144	ENSMUSP00000139362	TRANSLATION	protein_coding	-	-	5	836	0	0	0	372.5	0	-4,-5	-	-	5.256	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000185039	ENSMUSP00000139109	TRANSLATION	protein_coding	-	-	1	279	0	0	0	194.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000183350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032355	Mlip	ENSMUST00000184944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032355	Mlip	ENSMUST00000184316	ENSMUSP00000138938	TRANSLATION	protein_coding	stop	-	5	207	0	0	0	78	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000034910	ENSMUSP00000034910	TRANSLATION	protein_coding	-	CCDS52861.1	1	269	0	0	0.5	212.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000183955	ENSMUSP00000138864	TRANSLATION	protein_coding	-	-	5	967	0	0	0	372.5	0	-4,-5	-	-	5.256	MINOR
ENSMUSG00000032355	Mlip	ENSMUST00000184322	ENSMUSP00000139055	TRANSLATION	protein_coding	-	-	5	775	0	0	0	212.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000011114	Tbrg1	ENSMUST00000134711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011114	Tbrg1	ENSMUST00000126062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011114	Tbrg1	ENSMUST00000117654	ENSMUSP00000112600	TRANSLATION	protein_coding	-	CCDS52771.1	1	406	0	4.2	1.5	150	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000011114	Tbrg1	ENSMUST00000142736	ENSMUSP00000150375	TRANSLATION	nonsense_mediated_decay	-	-	2	201	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062621	Olfr911-ps1	ENSMUST00000216496	ENSMUSP00000150446	TRANSLATION	protein_coding	-	CCDS23015.1	5	311	0	0.2	6.4	157.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062621	Olfr911-ps1	ENSMUST00000074987	ENSMUSP00000074515	TRANSLATION	protein_coding	-	CCDS23015.1	-	311	0	0.2	6.4	157.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048521	Cxcr6	ENSMUST00000216072	ENSMUSP00000151182	TRANSLATION	protein_coding	-	-	1	358	0	0.64	0	147	6	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048521	Cxcr6	ENSMUST00000049810	ENSMUSP00000060776	TRANSLATION	protein_coding	-	CCDS23664.1	1	351	0	0.64	1.5	147	6	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000035606	Ky	ENSMUST00000190609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035606	Ky	ENSMUST00000039390	ENSMUSP00000036032	TRANSLATION	protein_coding	-	CCDS23445.1	1	661	0	0	3.9	56	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000043987	Cep164	ENSMUST00000213154	ENSMUSP00000149815	TRANSLATION	protein_coding	-	-	5	2034	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043987	Cep164	ENSMUST00000117194	ENSMUSP00000114053	TRANSLATION	protein_coding	-	CCDS52783.1	5	1333	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000043987	Cep164	ENSMUST00000214868	ENSMUSP00000149980	TRANSLATION	protein_coding	stop	-	5	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043987	Cep164	ENSMUST00000132430	ENSMUSP00000117344	TRANSLATION	protein_coding	start/stop	-	5	627	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043987	Cep164	ENSMUST00000217022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043987	Cep164	ENSMUST00000217554	ENSMUSP00000149347	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000043987	Cep164	ENSMUST00000214971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043987	Cep164	ENSMUST00000216284	ENSMUSP00000150742	TRANSLATION	protein_coding	start	-	1	1172	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043987	Cep164	ENSMUST00000152629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032607	Amt	ENSMUST00000160025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032607	Amt	ENSMUST00000162568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032607	Amt	ENSMUST00000160675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032607	Amt	ENSMUST00000035230	ENSMUSP00000035230	TRANSLATION	protein_coding	-	CCDS23519.1	1	403	13	7.5	5.1	358.5	0	-2,2	-	-	20	PRINCIPAL:1
ENSMUSG00000035284	Vps13c	ENSMUST00000077879	ENSMUSP00000077040	TRANSLATION	protein_coding	-	CCDS40676.1	1	3748	0	0	0.5	1014.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035284	Vps13c	ENSMUST00000216856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035284	Vps13c	ENSMUST00000217386	ENSMUSP00000150974	TRANSLATION	nonsense_mediated_decay	-	-	1	771	0	0	0	510.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035284	Vps13c	ENSMUST00000213168	ENSMUSP00000149778	TRANSLATION	protein_coding	start	-	1	757	0	0	0	250.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035284	Vps13c	ENSMUST00000215524	ENSMUSP00000149945	TRANSLATION	nonsense_mediated_decay	start	-	1	76	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032065	Tex12	ENSMUST00000217236	ENSMUSP00000149921	TRANSLATION	protein_coding	-	CCDS40621.1	1	123	0	0	7.5	169.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032065	Tex12	ENSMUST00000034568	ENSMUSP00000034568	TRANSLATION	protein_coding	-	CCDS40621.1	1	123	0	0	7.5	169.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032376	Usp3	ENSMUST00000150840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032376	Usp3	ENSMUST00000127569	ENSMUSP00000122199	TRANSLATION	protein_coding	-	CCDS23305.1	1	520	20	9.788	13	276.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032376	Usp3	ENSMUST00000139547	ENSMUSP00000115620	TRANSLATION	nonsense_mediated_decay	-	-	1	49	1	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032376	Usp3	ENSMUST00000034940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032376	Usp3	ENSMUST00000174387	ENSMUSP00000134472	TRANSLATION	protein_coding	-	-	5	476	14	9.428	1.2	228.5	0	-4,-5	-	-	10.442	MINOR
ENSMUSG00000032376	Usp3	ENSMUST00000132255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032376	Usp3	ENSMUST00000139952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032376	Usp3	ENSMUST00000154476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032376	Usp3	ENSMUST00000124694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032376	Usp3	ENSMUST00000098613	ENSMUSP00000096213	TRANSLATION	protein_coding	-	CCDS81025.1	1	482	20	9.468	0.5	225.4	0	-4,-5	-	-	14.268	MINOR
ENSMUSG00000032376	Usp3	ENSMUST00000124519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032377	Plscr4	ENSMUST00000143866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032377	Plscr4	ENSMUST00000034941	ENSMUSP00000034941	TRANSLATION	protein_coding	-	CCDS23407.1	1	326	0	0	2.7	279.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000111692	Gm49373	ENSMUST00000213826	ENSMUSP00000150978	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	88	9	2.08	0	32.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000032226	Gcnt3	ENSMUST00000034751	ENSMUSP00000034751	TRANSLATION	protein_coding	-	CCDS40678.1	1	437	19	1	6.3	205.7	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000092622	Khdc3	ENSMUST00000173734	ENSMUSP00000133915	TRANSLATION	protein_coding	-	CCDS81036.1	1	346	0	3.1	0.5	108.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000092622	Khdc3	ENSMUST00000167514	ENSMUSP00000132527	TRANSLATION	protein_coding	-	-	5	416	0	3.1	0	108.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000092622	Khdc3	ENSMUST00000172578	ENSMUSP00000133850	TRANSLATION	protein_coding	stop	-	3	74	0	1.5	0	61.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000092622	Khdc3	ENSMUST00000034737	ENSMUSP00000034737	TRANSLATION	protein_coding	-	CCDS23336.1	1	440	0	3.1	0.5	108.5	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000025651	Uqcrc1	ENSMUST00000192305	ENSMUSP00000141324	TRANSLATION	protein_coding	start	-	2	41	1	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025651	Uqcrc1	ENSMUST00000026743	ENSMUSP00000026743	TRANSLATION	protein_coding	-	CCDS23540.1	1	480	1	13.66	5.1	287	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000025651	Uqcrc1	ENSMUST00000195738	ENSMUSP00000141603	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025651	Uqcrc1	ENSMUST00000192918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025651	Uqcrc1	ENSMUST00000194469	ENSMUSP00000141743	TRANSLATION	protein_coding	start/stop	-	5	162	0	3.85	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025651	Uqcrc1	ENSMUST00000195387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025651	Uqcrc1	ENSMUST00000193332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025651	Uqcrc1	ENSMUST00000194047	ENSMUSP00000141435	TRANSLATION	protein_coding	stop	-	3	191	1	5.58	0	177.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000084786	Ubl5	ENSMUST00000162303	ENSMUSP00000124812	TRANSLATION	protein_coding	-	CCDS52733.1	2	73	0	2.24	19.5	27.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000084786	Ubl5	ENSMUST00000129414	ENSMUSP00000123971	TRANSLATION	protein_coding	-	CCDS52733.1	1	73	0	2.24	19.5	27.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000084786	Ubl5	ENSMUST00000161595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084786	Ubl5	ENSMUST00000160874	ENSMUSP00000124405	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000084786	Ubl5	ENSMUST00000154429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084786	Ubl5	ENSMUST00000161486	ENSMUSP00000124506	TRANSLATION	protein_coding	-	-	2	72	0	1.316	0	0	0	-4,-5	-	-	3.528	MINOR
ENSMUSG00000084786	Ubl5	ENSMUST00000160682	ENSMUSP00000124672	TRANSLATION	protein_coding	-	CCDS52733.1	5	73	0	2.24	19.5	27.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000084786	Ubl5	ENSMUST00000160124	ENSMUSP00000125364	TRANSLATION	protein_coding	-	CCDS52733.1	2	73	0	2.24	19.5	27.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000084786	Ubl5	ENSMUST00000161882	ENSMUSP00000125540	TRANSLATION	protein_coding	-	CCDS80963.1	3	113	0	1.7	0.5	0	0	-4,-5	-	-	4.554	MINOR
ENSMUSG00000084786	Ubl5	ENSMUST00000161834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084786	Ubl5	ENSMUST00000161887	ENSMUSP00000123843	TRANSLATION	protein_coding	stop	-	5	56	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003308	Keap1	ENSMUST00000164812	ENSMUSP00000131029	TRANSLATION	protein_coding	-	CCDS22897.1	1	624	0	5	3.9	511.7	0	-4,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000003308	Keap1	ENSMUST00000193982	ENSMUSP00000141840	TRANSLATION	protein_coding	-	CCDS22897.1	1	624	0	5	3.9	511.7	0	-4,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000003308	Keap1	ENSMUST00000193247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003308	Keap1	ENSMUST00000049567	ENSMUSP00000062467	TRANSLATION	protein_coding	-	CCDS22897.1	1	624	0	5	3.9	511.7	0	-4,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000003308	Keap1	ENSMUST00000194542	ENSMUSP00000141807	TRANSLATION	protein_coding	-	CCDS22897.1	1	624	0	5	3.9	511.7	0	-4,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000003308	Keap1	ENSMUST00000216436	ENSMUSP00000149705	TRANSLATION	protein_coding	-	-	5	620	0	5	3.9	494.6	0	-4,-6	-	-	11.974	ALTERNATIVE:2
ENSMUSG00000032064	Dixdc1	ENSMUST00000121634	ENSMUSP00000113089	TRANSLATION	protein_coding	-	CCDS80995.1	5	710	0	4.75	0.5	163.1	0	-4,-2	-	-	11.478	MINOR
ENSMUSG00000032064	Dixdc1	ENSMUST00000119449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032064	Dixdc1	ENSMUST00000151109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032064	Dixdc1	ENSMUST00000141919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032064	Dixdc1	ENSMUST00000034566	ENSMUSP00000034566	TRANSLATION	protein_coding	-	CCDS23169.1	1	711	0	4.75	0.5	163.3	0	-4,-6	-	-	11.49	MINOR
ENSMUSG00000032064	Dixdc1	ENSMUST00000117093	ENSMUSP00000112654	TRANSLATION	protein_coding	-	-	1	116	0	1	0	34.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032064	Dixdc1	ENSMUST00000117646	ENSMUSP00000112431	TRANSLATION	protein_coding	-	-	5	685	0	4.75	6.3	171.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032064	Dixdc1	ENSMUST00000118707	ENSMUSP00000113907	TRANSLATION	protein_coding	-	-	1	117	0	1	0	34.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032064	Dixdc1	ENSMUST00000120622	ENSMUSP00000113934	TRANSLATION	protein_coding	-	-	1	343	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032064	Dixdc1	ENSMUST00000154315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032064	Dixdc1	ENSMUST00000124424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032064	Dixdc1	ENSMUST00000149717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041124	Msantd4	ENSMUST00000047173	ENSMUSP00000038267	TRANSLATION	protein_coding	-	CCDS22796.1	1	345	0	0	7.5	81.5	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000041124	Msantd4	ENSMUST00000213011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041124	Msantd4	ENSMUST00000212075	ENSMUSP00000148805	TRANSLATION	protein_coding	-	CCDS22796.1	1	345	0	0	7.5	81.5	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000074060	Fbxw15	ENSMUST00000056745	ENSMUSP00000058175	TRANSLATION	protein_coding	-	CCDS23553.1	1	466	0	3.02	0.5	42.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000074060	Fbxw15	ENSMUST00000198397	ENSMUSP00000143385	TRANSLATION	protein_coding	-	-	1	283	0	3.02	0.5	42.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000074060	Fbxw15	ENSMUST00000198112	ENSMUSP00000142894	TRANSLATION	protein_coding	stop	-	3	250	0	2.4	0	42.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043659	Npsr1	ENSMUST00000059650	ENSMUSP00000056432	TRANSLATION	protein_coding	-	CCDS22930.1	1	371	0	6.24	1.5	145.5	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043659	Npsr1	ENSMUST00000154644	ENSMUSP00000115126	TRANSLATION	protein_coding	stop	-	3	185	0	3.37	0	80.1	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000043659	Npsr1	ENSMUST00000154337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043659	Npsr1	ENSMUST00000133787	ENSMUSP00000117786	TRANSLATION	protein_coding	stop	-	5	190	0	3.64	0	83.8	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000032593	Amigo3	ENSMUST00000085060	ENSMUSP00000082137	TRANSLATION	protein_coding	-	CCDS23516.1	-	508	0	0.48	2.7	58.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063176	Olfr955	ENSMUST00000220176	ENSMUSP00000151246	TRANSLATION	protein_coding	-	CCDS23047.1	5	314	0	0.24	1.5	157.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063176	Olfr955	ENSMUST00000073946	ENSMUSP00000073602	TRANSLATION	protein_coding	-	CCDS23047.1	-	314	0	0.24	1.5	157.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063176	Olfr955	ENSMUST00000219910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035032	Nek11	ENSMUST00000215670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035032	Nek11	ENSMUST00000156256	ENSMUSP00000116761	TRANSLATION	nonsense_mediated_decay	-	-	1	200	16	3.52	0	111.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035032	Nek11	ENSMUST00000140851	ENSMUSP00000116864	TRANSLATION	protein_coding	stop	-	1	361	17	6.8	0	205.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035032	Nek11	ENSMUST00000177029	ENSMUSP00000135837	TRANSLATION	nonsense_mediated_decay	-	-	5	80	7	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035032	Nek11	ENSMUST00000038648	ENSMUSP00000038611	TRANSLATION	protein_coding	-	CCDS23464.1	1	628	17	6.8	0.5	205.3	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031925	Maml2	ENSMUST00000159294	ENSMUSP00000124083	TRANSLATION	protein_coding	-	-	5	1170	0	0.4	0.5	71.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031925	Maml2	ENSMUST00000034401	ENSMUSP00000034401	TRANSLATION	protein_coding	-	CCDS52723.1	1	414	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031925	Maml2	ENSMUST00000177755	ENSMUSP00000136866	TRANSLATION	protein_coding	-	CCDS52723.1	1	414	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000074397	Foxr1	ENSMUST00000215375	ENSMUSP00000149277	TRANSLATION	protein_coding	stop	-	5	263	0	1.2	0	85	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074397	Foxr1	ENSMUST00000215980	ENSMUSP00000150402	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074397	Foxr1	ENSMUST00000098837	ENSMUSP00000096436	TRANSLATION	protein_coding	-	CCDS23111.1	1	223	0	0.6	0.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000009741	Ubp1	ENSMUST00000116492	ENSMUSP00000112192	TRANSLATION	protein_coding	-	CCDS40789.1	1	504	0	0	8.3	198.2	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000009741	Ubp1	ENSMUST00000084885	ENSMUSP00000081946	TRANSLATION	protein_coding	-	CCDS40788.1	5	540	0	0	8.3	198.2	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000009741	Ubp1	ENSMUST00000009885	ENSMUSP00000009885	TRANSLATION	protein_coding	-	CCDS40789.1	5	504	0	0	8.3	198.2	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000009741	Ubp1	ENSMUST00000216891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009741	Ubp1	ENSMUST00000214095	ENSMUSP00000149908	TRANSLATION	protein_coding	-	CCDS40789.1	1	504	0	0	8.3	198.2	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000009741	Ubp1	ENSMUST00000216293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009741	Ubp1	ENSMUST00000216558	ENSMUSP00000150023	TRANSLATION	protein_coding	-	CCDS40788.1	1	540	0	0	8.3	198.2	0	-4,-5	-	-	9	PRINCIPAL:4
ENSMUSG00000032564	Cpne4	ENSMUST00000213452	ENSMUSP00000150551	TRANSLATION	protein_coding	start/stop	-	5	185	0	0	0	185.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032564	Cpne4	ENSMUST00000077190	ENSMUSP00000076432	TRANSLATION	protein_coding	-	-	1	475	2	1.07	0	386.9	0	-4,-5	-	-	9.894	MINOR
ENSMUSG00000032564	Cpne4	ENSMUST00000057742	ENSMUSP00000049663	TRANSLATION	protein_coding	-	CCDS23461.1	1	557	6	1.87	17.3	412.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032564	Cpne4	ENSMUST00000157006	ENSMUSP00000117155	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032564	Cpne4	ENSMUST00000213120	ENSMUSP00000150096	TRANSLATION	protein_coding	stop	-	5	278	6	1.87	0	93.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032564	Cpne4	ENSMUST00000098443	ENSMUSP00000096042	TRANSLATION	protein_coding	-	-	1	145	0	0	0	44.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057193	Slc44a2	ENSMUST00000214268	ENSMUSP00000150612	TRANSLATION	protein_coding	start	-	5	170	0	0	0	172.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000057193	Slc44a2	ENSMUST00000215574	ENSMUSP00000151150	TRANSLATION	nonsense_mediated_decay	-	-	1	554	0	0	0	174.6	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000057193	Slc44a2	ENSMUST00000034697	ENSMUSP00000034697	TRANSLATION	protein_coding	-	CCDS22903.1	1	706	0	0	5.1	364.6	19	-4,-6	-	-	7.548	PRINCIPAL:2
ENSMUSG00000057193	Slc44a2	ENSMUST00000217453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057193	Slc44a2	ENSMUST00000215528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057193	Slc44a2	ENSMUST00000213758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057193	Slc44a2	ENSMUST00000217461	ENSMUSP00000150147	TRANSLATION	protein_coding	-	-	1	704	0	0	6.3	364.6	19	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000057193	Slc44a2	ENSMUST00000216266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057193	Slc44a2	ENSMUST00000213499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057193	Slc44a2	ENSMUST00000213535	ENSMUSP00000149795	TRANSLATION	protein_coding	start	-	3	111	0	0	0	68.9	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000091080	Prr23a1	ENSMUST00000170349	ENSMUSP00000127711	TRANSLATION	protein_coding	-	CCDS52894.1	-	258	0	0	0.5	312.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000032026	Rexo2	ENSMUST00000213895	ENSMUSP00000149774	TRANSLATION	protein_coding	stop	-	3	140	0	2.8	0	42.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032026	Rexo2	ENSMUST00000216624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000213508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000214161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000216142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000034524	ENSMUSP00000034524	TRANSLATION	protein_coding	-	CCDS23154.1	1	237	4	5.08	7.5	114.5	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000032026	Rexo2	ENSMUST00000216470	ENSMUSP00000149074	TRANSLATION	protein_coding	-	-	3	113	2	1.7	0	44.7	0	-4,0	-	-	3.812	MINOR
ENSMUSG00000032026	Rexo2	ENSMUST00000213875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000214929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032026	Rexo2	ENSMUST00000217037	ENSMUSP00000149784	TRANSLATION	protein_coding	-	-	3	121	2	2.2	0	51.7	0	-4,0	-	-	4.472	MINOR
ENSMUSG00000000171	Sdhd	ENSMUST00000000175	ENSMUSP00000000175	TRANSLATION	protein_coding	-	CCDS40623.1	1	159	13	3.5	6.3	84.1	0	-1,1	-	-	20	PRINCIPAL:1
ENSMUSG00000096385	Gm11168	ENSMUST00000178077	ENSMUSP00000136761	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	0	4	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096385	Gm11168	ENSMUST00000179881	ENSMUSP00000136541	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	4	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096385	Gm11168	ENSMUST00000177722	ENSMUSP00000136598	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	0	4	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000096385	Gm11168	ENSMUST00000178348	ENSMUSP00000137273	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	5	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000032271	Nnmt	ENSMUST00000126109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032271	Nnmt	ENSMUST00000128076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032271	Nnmt	ENSMUST00000119426	ENSMUSP00000112381	TRANSLATION	protein_coding	-	CCDS80991.1	1	157	18	2.5	0.5	188.4	0	-4,-5	-	-	0.498	MINOR
ENSMUSG00000032271	Nnmt	ENSMUST00000136813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032271	Nnmt	ENSMUST00000034808	ENSMUSP00000034808	TRANSLATION	protein_coding	-	CCDS23157.1	1	264	28	5.25	5.1	332.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032452	Clstn2	ENSMUST00000035027	ENSMUSP00000035027	TRANSLATION	protein_coding	-	CCDS40733.1	1	966	14	3.02	1.5	35.9	1	1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000032452	Clstn2	ENSMUST00000162295	ENSMUSP00000124081	TRANSLATION	protein_coding	-	-	5	960	14	3.02	1.5	35.9	1	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000046997	Spsb4	ENSMUST00000162307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046997	Spsb4	ENSMUST00000064445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046997	Spsb4	ENSMUST00000055433	ENSMUSP00000057849	TRANSLATION	protein_coding	-	CCDS23419.1	1	273	3	1.8	12	114	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000046997	Spsb4	ENSMUST00000159298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066319	Rtp3	ENSMUST00000199891	ENSMUSP00000143305	TRANSLATION	protein_coding	-	CCDS81087.1	5	474	4	0	0.5	89.7	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000066319	Rtp3	ENSMUST00000084922	ENSMUSP00000081985	TRANSLATION	protein_coding	-	-	5	474	4	0	0.5	89.7	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000066319	Rtp3	ENSMUST00000198702	ENSMUSP00000143100	TRANSLATION	protein_coding	stop	-	3	81	2	0	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052058	Olfr901	ENSMUST00000063716	ENSMUSP00000066714	TRANSLATION	protein_coding	-	CCDS23009.1	-	311	0	0.32	2.7	159.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052058	Olfr901	ENSMUST00000216502	ENSMUSP00000150507	TRANSLATION	protein_coding	-	CCDS23009.1	3	311	0	0.32	2.7	159.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052058	Olfr901	ENSMUST00000216644	ENSMUSP00000150506	TRANSLATION	protein_coding	-	CCDS23009.1	5	311	0	0.32	2.7	159.3	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000086158	Ccpg1os	ENSMUST00000184123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086158	Ccpg1os	ENSMUST00000124565	ENSMUSP00000139187	TRANSLATION	protein_coding	-	CCDS72276.1	1	122	0	0	1.5	44.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049307	Fut4	ENSMUST00000061498	ENSMUSP00000053027	TRANSLATION	protein_coding	-	CCDS22825.1	-	433	8	0	1.5	342.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046846	Spesp1	ENSMUST00000056949	ENSMUSP00000058522	TRANSLATION	protein_coding	-	CCDS23263.1	1	399	0	0	0.5	503.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000032099	Pate4	ENSMUST00000034610	ENSMUSP00000034610	TRANSLATION	protein_coding	-	CCDS22967.1	1	99	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000032468	Armc8	ENSMUST00000035043	ENSMUSP00000035043	TRANSLATION	protein_coding	-	CCDS23434.1	1	673	0	8.949	15.3	23	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000032468	Armc8	ENSMUST00000191370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032468	Armc8	ENSMUST00000185524	ENSMUSP00000139973	TRANSLATION	protein_coding	-	CCDS81059.1	1	399	0	4.39	0.5	23	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032468	Armc8	ENSMUST00000186049	ENSMUSP00000140426	TRANSLATION	protein_coding	-	-	1	357	0	4.09	0	23	0	-4,-7	-	-	6	MINOR
ENSMUSG00000036030	Prtg	ENSMUST00000055535	ENSMUSP00000055815	TRANSLATION	protein_coding	-	CCDS23331.1	1	1191	0	10.595	1.5	398.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036030	Prtg	ENSMUST00000184274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032245	Cln6	ENSMUST00000138276	ENSMUSP00000117833	TRANSLATION	nonsense_mediated_decay	start	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032245	Cln6	ENSMUST00000034776	ENSMUSP00000034776	TRANSLATION	protein_coding	-	CCDS23267.1	1	308	0	0	1.5	544.2	4	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000032245	Cln6	ENSMUST00000141821	ENSMUSP00000114283	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000032245	Cln6	ENSMUST00000124984	ENSMUSP00000115675	TRANSLATION	protein_coding	start	-	3	191	0	0	0	275	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000037808	Fam76b	ENSMUST00000213416	ENSMUSP00000149169	TRANSLATION	protein_coding	start	-	2	74	0	0	0	67.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037808	Fam76b	ENSMUST00000129861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037808	Fam76b	ENSMUST00000130106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037808	Fam76b	ENSMUST00000059579	ENSMUSP00000062642	TRANSLATION	protein_coding	-	CCDS22819.1	1	339	4	0	11	397.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000037808	Fam76b	ENSMUST00000156680	ENSMUSP00000115751	TRANSLATION	nonsense_mediated_decay	-	-	5	233	4	0	2.7	289	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091996	BC049352	ENSMUST00000164650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091996	BC049352	ENSMUST00000171799	ENSMUSP00000132091	TRANSLATION	protein_coding	-	CCDS52782.1	1	85	0	0	1.5	0	0	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000091996	BC049352	ENSMUST00000171277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062275	Fbxw24	ENSMUST00000073962	ENSMUSP00000073617	TRANSLATION	protein_coding	-	CCDS40774.1	1	466	0	1.24	0.5	39.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032293	Ireb2	ENSMUST00000213482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032293	Ireb2	ENSMUST00000214023	ENSMUSP00000149766	TRANSLATION	protein_coding	start/stop	-	3	225	5	4.207	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032293	Ireb2	ENSMUST00000034843	ENSMUSP00000034843	TRANSLATION	protein_coding	-	CCDS23196.1	1	963	16	17	7.5	146.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000061039	Olfr920	ENSMUST00000074740	ENSMUSP00000074300	TRANSLATION	protein_coding	-	CCDS23025.1	1	310	0	0.2	6.4	157.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032503	Arpp21	ENSMUST00000161138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000162097	ENSMUSP00000124502	TRANSLATION	protein_coding	-	CCDS23587.1	5	807	2	3.5	1.5	92.7	0	-4,-5	-	-	14.244	PRINCIPAL:1
ENSMUSG00000032503	Arpp21	ENSMUST00000161261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000070218	ENSMUSP00000069264	TRANSLATION	protein_coding	-	CCDS52945.1	5	809	2	3.5	3.9	48.3	0	-4,-5	-	-	12.54	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000162796	ENSMUSP00000124670	TRANSLATION	protein_coding	stop	-	5	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000172380	ENSMUSP00000130558	TRANSLATION	protein_coding	-	CCDS40786.1	1	88	0	0	5.1	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000163025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000163004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000159451	ENSMUSP00000125095	TRANSLATION	protein_coding	-	CCDS52943.1	1	601	2	2.5	0.5	48.3	0	-4,-5	-	-	9.128	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000164754	ENSMUSP00000125862	TRANSLATION	protein_coding	-	CCDS23587.1	1	807	2	3.5	1.5	92.7	0	-4,-5	-	-	14.244	PRINCIPAL:1
ENSMUSG00000032503	Arpp21	ENSMUST00000159444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000160741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000159246	ENSMUSP00000123715	TRANSLATION	nonsense_mediated_decay	-	-	1	282	2	2.5	1	48.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000159183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000159055	ENSMUSP00000123883	TRANSLATION	protein_coding	stop	-	1	278	2	3.5	0	48.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000161097	ENSMUSP00000123937	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000178410	ENSMUSP00000136769	TRANSLATION	protein_coding	-	CCDS40786.1	1	88	0	0	5.1	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000162533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000162065	ENSMUSP00000125684	TRANSLATION	protein_coding	-	CCDS52945.1	1	809	2	3.5	3.9	48.3	0	-4,-5	-	-	12.54	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000161412	ENSMUSP00000125282	TRANSLATION	protein_coding	-	CCDS52946.1	1	248	2	2.5	0.5	48.3	0	-4,-5	-	-	9.128	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000161467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000162840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000159432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000035085	ENSMUSP00000035085	TRANSLATION	protein_coding	-	CCDS52944.1	1	789	2	3.5	3.9	48.3	0	-4,-5	-	-	12.54	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000162050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000111872	ENSMUSP00000107503	TRANSLATION	protein_coding	-	CCDS52945.1	5	809	2	3.5	3.9	48.3	0	-4,-5	-	-	12.54	MINOR
ENSMUSG00000032503	Arpp21	ENSMUST00000159667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000159220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000162082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032503	Arpp21	ENSMUST00000161945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032503	Arpp21	ENSMUST00000160478	ENSMUSP00000124550	TRANSLATION	protein_coding	stop	-	5	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032186	Tmod2	ENSMUST00000215614	ENSMUSP00000150413	TRANSLATION	protein_coding	-	CCDS23345.1	1	351	0	7.068	11.6	199.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032186	Tmod2	ENSMUST00000215036	ENSMUSP00000150750	TRANSLATION	protein_coding	-	CCDS23345.1	1	351	0	7.068	11.6	199.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032186	Tmod2	ENSMUST00000213565	ENSMUSP00000149584	TRANSLATION	protein_coding	stop	-	3	131	0	2.398	0	172.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032186	Tmod2	ENSMUST00000214581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032186	Tmod2	ENSMUST00000164100	ENSMUSP00000126739	TRANSLATION	protein_coding	-	CCDS23345.1	1	351	0	7.068	11.6	199.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032186	Tmod2	ENSMUST00000217233	ENSMUSP00000150170	TRANSLATION	protein_coding	stop	-	3	9	0	0.198	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032186	Tmod2	ENSMUST00000215462	ENSMUSP00000150645	TRANSLATION	protein_coding	-	-	1	248	0	4.738	0	199.9	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000032186	Tmod2	ENSMUST00000098552	ENSMUSP00000096152	TRANSLATION	protein_coding	-	CCDS23345.1	1	351	0	7.068	11.6	199.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032186	Tmod2	ENSMUST00000064433	ENSMUSP00000069956	TRANSLATION	protein_coding	-	CCDS23345.1	1	351	0	7.068	11.6	199.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023333	Gcm1	ENSMUST00000024104	ENSMUSP00000024104	TRANSLATION	protein_coding	-	CCDS23356.1	1	436	8	3.75	1.5	239.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049493	Pls1	ENSMUST00000119760	ENSMUSP00000113200	TRANSLATION	protein_coding	stop	-	3	138	12	3.25	0	43.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049493	Pls1	ENSMUST00000093800	ENSMUSP00000091317	TRANSLATION	protein_coding	-	CCDS23412.1	1	630	12	13.95	9.5	327.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000049493	Pls1	ENSMUST00000135816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045528	Olfr891	ENSMUST00000062535	ENSMUSP00000055451	TRANSLATION	protein_coding	-	CCDS22999.1	-	316	0	0.2	1.5	126.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032047	Acat1	ENSMUST00000167130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032047	Acat1	ENSMUST00000034547	ENSMUSP00000034547	TRANSLATION	protein_coding	-	CCDS23184.1	1	424	20	10.15	1.5	475.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032047	Acat1	ENSMUST00000169317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034135	Sik3	ENSMUST00000215954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034135	Sik3	ENSMUST00000120463	ENSMUSP00000112749	TRANSLATION	protein_coding	start	-	5	1319	18	8.795	0.5	252.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000034135	Sik3	ENSMUST00000153152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034135	Sik3	ENSMUST00000122865	ENSMUSP00000115981	TRANSLATION	protein_coding	start	-	1	506	10	7.065	0	217.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034135	Sik3	ENSMUST00000126865	ENSMUSP00000121032	TRANSLATION	protein_coding	-	CCDS23140.2	1	1369	18	8.795	0.5	252.7	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034135	Sik3	ENSMUST00000138338	ENSMUSP00000115805	TRANSLATION	protein_coding	start	-	5	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034135	Sik3	ENSMUST00000120247	ENSMUSP00000112859	TRANSLATION	protein_coding	start	-	5	1214	18	7.795	0	252.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032314	Etfa	ENSMUST00000142587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032314	Etfa	ENSMUST00000034866	ENSMUSP00000034866	TRANSLATION	protein_coding	-	CCDS23204.1	1	333	25	9.5	8.8	266.5	0	-3,1	-	-	21	PRINCIPAL:1
ENSMUSG00000032314	Etfa	ENSMUST00000153186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032314	Etfa	ENSMUST00000139342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041837	Pdcd7	ENSMUST00000215470	ENSMUSP00000151141	TRANSLATION	protein_coding	start	-	5	280	0	0	0	297.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041837	Pdcd7	ENSMUST00000214433	ENSMUSP00000148947	TRANSLATION	protein_coding	start/stop	-	5	287	0	0	0	327.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041837	Pdcd7	ENSMUST00000048184	ENSMUSP00000035515	TRANSLATION	protein_coding	-	CCDS40670.1	1	484	0	0	1.7	382.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048299	Olfr148	ENSMUST00000050807	ENSMUSP00000096473	TRANSLATION	protein_coding	-	CCDS23053.1	-	310	0	0.2	3.9	152.3	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000048299	Olfr148	ENSMUST00000216801	ENSMUSP00000150761	TRANSLATION	protein_coding	-	CCDS23053.1	5	310	0	0.2	3.9	152.3	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000059821	Olfr847	ENSMUST00000079620	ENSMUSP00000078568	TRANSLATION	protein_coding	-	CCDS22856.1	-	312	0	0.42	2.7	190	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059821	Olfr847	ENSMUST00000216839	ENSMUSP00000151112	TRANSLATION	protein_coding	-	CCDS22856.1	3	312	0	0.42	2.7	190	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074059	Fbxw18	ENSMUST00000098359	ENSMUSP00000095962	TRANSLATION	protein_coding	-	CCDS40775.1	1	469	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036395	Glb1l2	ENSMUST00000160458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036395	Glb1l2	ENSMUST00000066560	ENSMUSP00000066770	TRANSLATION	protein_coding	-	CCDS80971.1	1	636	16	12.295	5.1	381.9	0	-1,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000036395	Glb1l2	ENSMUST00000161635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036395	Glb1l2	ENSMUST00000162702	ENSMUSP00000125022	TRANSLATION	protein_coding	-	-	1	515	11	9.745	0	209.5	0	0,-4	-	-	3.564	MINOR
ENSMUSG00000036395	Glb1l2	ENSMUST00000040398	ENSMUSP00000047128	TRANSLATION	protein_coding	-	CCDS40566.1	1	652	16	12.295	1.5	381.9	0	-1,-7	-	-	18.244	MINOR
ENSMUSG00000036395	Glb1l2	ENSMUST00000216272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036395	Glb1l2	ENSMUST00000162252	ENSMUSP00000124415	TRANSLATION	protein_coding	-	-	1	592	12	10.665	0	381.9	0	0,-3	-	-	12.078	MINOR
ENSMUSG00000036395	Glb1l2	ENSMUST00000162378	ENSMUSP00000123830	TRANSLATION	nonsense_mediated_decay	-	-	5	210	9	3.73	0	195.5	0	-1,-7	-	-	-1	MINOR
ENSMUSG00000047822	Angptl8	ENSMUST00000058777	ENSMUSP00000058951	TRANSLATION	protein_coding	-	CCDS40556.1	1	198	0	0	3.9	0	0	3,-2	-	-	1	PRINCIPAL:1
ENSMUSG00000025236	Adpgk	ENSMUST00000215994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025236	Adpgk	ENSMUST00000214361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025236	Adpgk	ENSMUST00000217570	ENSMUSP00000149882	TRANSLATION	protein_coding	-	CCDS23248.1	1	496	23	6.55	6.3	456.6	0	1,-3	-	-	19.718	PRINCIPAL:2
ENSMUSG00000025236	Adpgk	ENSMUST00000026266	ENSMUSP00000026266	TRANSLATION	protein_coding	-	-	1	495	23	6.55	6.3	461.3	0	1,-3	-	-	20	ALTERNATIVE:1
ENSMUSG00000025236	Adpgk	ENSMUST00000213413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066892	Fbxl12	ENSMUST00000131343	ENSMUSP00000118873	TRANSLATION	protein_coding	stop	-	3	132	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000066892	Fbxl12	ENSMUST00000140702	ENSMUSP00000114466	TRANSLATION	protein_coding	-	CCDS22881.1	-	273	0	0.24	6.3	0	0	-4,0	-	-	2.906	MINOR
ENSMUSG00000066892	Fbxl12	ENSMUST00000153154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066892	Fbxl12	ENSMUST00000086459	ENSMUSP00000083650	TRANSLATION	protein_coding	-	CCDS22880.1	1	326	0	1.59	6.3	52.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000066892	Fbxl12	ENSMUST00000148631	ENSMUSP00000119124	TRANSLATION	protein_coding	-	CCDS22880.1	1	326	0	1.59	6.3	52.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000066892	Fbxl12	ENSMUST00000131128	ENSMUSP00000115058	TRANSLATION	protein_coding	-	CCDS22881.1	1	273	0	0.24	6.3	0	0	-4,0	-	-	2.906	MINOR
ENSMUSG00000066892	Fbxl12	ENSMUST00000155301	ENSMUSP00000118369	TRANSLATION	protein_coding	-	-	3	86	0	1.35	0	52.4	0	-4,-5	-	-	11.094	MINOR
ENSMUSG00000066892	Fbxl12	ENSMUST00000155280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066892	Fbxl12	ENSMUST00000151861	ENSMUSP00000121429	TRANSLATION	protein_coding	-	-	2	349	0	0.99	0.5	0	0	-4,-5	-	-	3.738	MINOR
ENSMUSG00000066892	Fbxl12	ENSMUST00000086458	ENSMUSP00000083649	TRANSLATION	protein_coding	-	CCDS22881.1	1	273	0	0.24	6.3	0	0	-4,0	-	-	2.906	MINOR
ENSMUSG00000032577	Mapkapk3	ENSMUST00000128175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032577	Mapkapk3	ENSMUST00000141674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032577	Mapkapk3	ENSMUST00000035194	ENSMUSP00000035194	TRANSLATION	protein_coding	-	CCDS23487.1	1	384	22	9.25	5.1	226.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032577	Mapkapk3	ENSMUST00000192054	ENSMUSP00000141342	TRANSLATION	protein_coding	-	CCDS85722.1	1	266	22	6.065	0.5	176.8	0	-4,-5	-	-	9.006	MINOR
ENSMUSG00000032577	Mapkapk3	ENSMUST00000155860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032577	Mapkapk3	ENSMUST00000134682	ENSMUSP00000120848	TRANSLATION	protein_coding	stop	-	2	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032577	Mapkapk3	ENSMUST00000143487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032577	Mapkapk3	ENSMUST00000141596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056724	Nbeal2	ENSMUST00000131017	ENSMUSP00000114660	TRANSLATION	protein_coding	start	-	5	1073	0	11.31	0	850.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056724	Nbeal2	ENSMUST00000129095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056724	Nbeal2	ENSMUST00000126088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056724	Nbeal2	ENSMUST00000196488	ENSMUSP00000143265	TRANSLATION	protein_coding	-	-	5	2716	0	11.31	0	1003.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000056724	Nbeal2	ENSMUST00000167320	ENSMUSP00000128586	TRANSLATION	protein_coding	-	CCDS52939.1	1	2750	0	11.31	1.5	1003.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000056724	Nbeal2	ENSMUST00000130024	ENSMUSP00000118061	TRANSLATION	protein_coding	start	-	5	2032	0	11.31	0	995.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056724	Nbeal2	ENSMUST00000123996	ENSMUSP00000122014	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056724	Nbeal2	ENSMUST00000138072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056724	Nbeal2	ENSMUST00000133191	ENSMUSP00000121373	TRANSLATION	protein_coding	-	-	5	2743	0	11.31	0	1003.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000056724	Nbeal2	ENSMUST00000153960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056724	Nbeal2	ENSMUST00000149089	ENSMUSP00000119254	TRANSLATION	protein_coding	stop	-	5	593	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032590	Apeh	ENSMUST00000194915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000192278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000193254	ENSMUSP00000141856	TRANSLATION	protein_coding	-	CCDS52923.1	1	732	4	5.6	7.5	125.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000032590	Apeh	ENSMUST00000192916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000194083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000194014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000191754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032590	Apeh	ENSMUST00000191985	ENSMUSP00000142150	TRANSLATION	protein_coding	stop	-	2	204	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032590	Apeh	ENSMUST00000081309	ENSMUSP00000080058	TRANSLATION	protein_coding	start	-	1	716	4	5.2	0	125.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025804	Ccr1	ENSMUST00000026911	ENSMUSP00000026911	TRANSLATION	protein_coding	-	CCDS23666.1	1	355	0	0.8	3.9	171.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000034218	Atm	ENSMUST00000132249	ENSMUSP00000118199	TRANSLATION	protein_coding	start/stop	-	5	201	0	2.178	0	52.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034218	Atm	ENSMUST00000232179	ENSMUSP00000156344	TRANSLATION	protein_coding	-	CCDS40636.1	-	3066	0	7.108	0.5	472.3	0	-4,-5	-	-	11.802	PRINCIPAL:2
ENSMUSG00000034218	Atm	ENSMUST00000132403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034218	Atm	ENSMUST00000118282	ENSMUSP00000113388	TRANSLATION	protein_coding	-	-	5	3063	0	7.108	0.5	475.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034218	Atm	ENSMUST00000150244	ENSMUSP00000115394	TRANSLATION	protein_coding	stop	-	5	140	0	0	0	73.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034218	Atm	ENSMUST00000126598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000133689	ENSMUSP00000128564	TRANSLATION	protein_coding	start	-	2	174	0	4.83	0	28.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000130466	ENSMUSP00000116969	TRANSLATION	protein_coding	stop	-	3	42	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000139138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000163844	ENSMUSP00000126905	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000169931	ENSMUSP00000128858	TRANSLATION	protein_coding	start/stop	-	3	169	0	3.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000145093	ENSMUSP00000120132	TRANSLATION	protein_coding	stop	-	3	174	0	5.17	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000126633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000156911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000007130	ENSMUSP00000007130	TRANSLATION	protein_coding	-	CCDS23630.1	1	781	0	20	19.5	110.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006932	Ctnnb1	ENSMUST00000215573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000178812	ENSMUSP00000136294	TRANSLATION	protein_coding	-	CCDS23630.1	1	781	0	20	19.5	110.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000006932	Ctnnb1	ENSMUST00000154356	ENSMUSP00000125763	TRANSLATION	nonsense_mediated_decay	-	-	5	607	0	14.67	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000154687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006932	Ctnnb1	ENSMUST00000130845	ENSMUSP00000116365	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	1.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006932	Ctnnb1	ENSMUST00000170729	ENSMUSP00000130471	TRANSLATION	nonsense_mediated_decay	start	-	5	145	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032322	Pstpip1	ENSMUST00000132800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032322	Pstpip1	ENSMUST00000147360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032322	Pstpip1	ENSMUST00000138646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032322	Pstpip1	ENSMUST00000135103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032322	Pstpip1	ENSMUST00000144638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032322	Pstpip1	ENSMUST00000059206	ENSMUSP00000055823	TRANSLATION	protein_coding	-	CCDS40645.1	1	415	0	7.75	3.9	111.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032322	Pstpip1	ENSMUST00000142894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003402	Prkcsh	ENSMUST00000003493	ENSMUSP00000003493	TRANSLATION	protein_coding	-	CCDS22918.1	1	521	10	3.65	0.5	72.8	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000003402	Prkcsh	ENSMUST00000115331	ENSMUSP00000110987	TRANSLATION	protein_coding	-	CCDS80967.1	1	528	10	3.65	0.5	72.8	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000003402	Prkcsh	ENSMUST00000214565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003402	Prkcsh	ENSMUST00000216344	ENSMUSP00000149936	TRANSLATION	protein_coding	-	CCDS22918.1	1	521	10	3.65	0.5	72.8	0	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000003402	Prkcsh	ENSMUST00000215795	ENSMUSP00000150233	TRANSLATION	protein_coding	stop	-	2	119	7	2.65	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000047995	Cypt4	ENSMUST00000053956	ENSMUSP00000054958	TRANSLATION	protein_coding	-	CCDS22932.1	-	153	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000095891	Gm10717	ENSMUST00000179982	ENSMUSP00000136365	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	9	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000099051	ENSMUSP00000096650	TRANSLATION	protein_coding	start/stop	-	5	213	0	0	0	0	9	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000099056	ENSMUSP00000096655	TRANSLATION	protein_coding	stop	-	5	223	0	0	0	0	7	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000177601	ENSMUSP00000136755	TRANSLATION	protein_coding	start/stop	-	5	215	0	0	0	0	6	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000179839	ENSMUSP00000136837	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	9	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000179264	ENSMUSP00000137451	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	13	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000099042	ENSMUSP00000096640	TRANSLATION	protein_coding	start/stop	-	5	223	0	0	0	0	14	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095891	Gm10717	ENSMUST00000075573	ENSMUSP00000096644	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	0	8	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000095891	Gm10717	ENSMUST00000177875	ENSMUSP00000137419	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	0	11	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000036138	Acaa1a	ENSMUST00000176546	ENSMUSP00000134981	TRANSLATION	nonsense_mediated_decay	start	-	5	114	2	3.278	0	111.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036138	Acaa1a	ENSMUST00000176796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036138	Acaa1a	ENSMUST00000175719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036138	Acaa1a	ENSMUST00000039784	ENSMUSP00000042351	TRANSLATION	protein_coding	-	CCDS23613.1	1	424	19	10.65	6.3	458.3	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000036138	Acaa1a	ENSMUST00000176007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036138	Acaa1a	ENSMUST00000175743	ENSMUSP00000135439	TRANSLATION	protein_coding	-	-	5	373	14	8.07	0	313.8	0	-4,0	-	-	3.504	MINOR
ENSMUSG00000036138	Acaa1a	ENSMUST00000177463	ENSMUSP00000135310	TRANSLATION	protein_coding	stop	-	5	199	2	5.41	0	160.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000036138	Acaa1a	ENSMUST00000175859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036138	Acaa1a	ENSMUST00000176351	ENSMUSP00000134926	TRANSLATION	protein_coding	stop	-	3	98	0	2.33	0	47.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000036138	Acaa1a	ENSMUST00000176397	ENSMUSP00000135191	TRANSLATION	protein_coding	-	-	5	331	12	8.65	1.2	244.5	0	-4,0	-	-	3.406	MINOR
ENSMUSG00000032560	Dnajc13	ENSMUST00000188139	ENSMUSP00000150468	TRANSLATION	protein_coding	start	-	5	96	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032560	Dnajc13	ENSMUST00000188885	ENSMUSP00000141056	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032560	Dnajc13	ENSMUST00000190600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000188592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000189299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000191199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000188425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000185503	ENSMUSP00000140571	TRANSLATION	nonsense_mediated_decay	start	-	5	174	0	0	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032560	Dnajc13	ENSMUST00000186788	ENSMUSP00000139804	TRANSLATION	protein_coding	-	-	1	2248	0	1.55	14.8	110.8	0	-4,-6	-	-	16	ALTERNATIVE:1
ENSMUSG00000032560	Dnajc13	ENSMUST00000188998	ENSMUSP00000140867	TRANSLATION	protein_coding	start	-	2	184	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032560	Dnajc13	ENSMUST00000189103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000189813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032560	Dnajc13	ENSMUST00000035170	ENSMUSP00000035170	TRANSLATION	protein_coding	-	CCDS52904.1	5	2243	0	1.55	13.7	110.8	0	-4,-6	-	-	15.68	PRINCIPAL:2
ENSMUSG00000032560	Dnajc13	ENSMUST00000190926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032353	Tmed3	ENSMUST00000058488	ENSMUSP00000058723	TRANSLATION	protein_coding	-	CCDS23396.1	1	221	0	1	1.5	160.6	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000032353	Tmed3	ENSMUST00000188808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032014	Oaf	ENSMUST00000215387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032014	Oaf	ENSMUST00000213286	ENSMUSP00000150783	TRANSLATION	protein_coding	start	-	3	121	0	0	0	141.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032014	Oaf	ENSMUST00000034512	ENSMUSP00000034512	TRANSLATION	protein_coding	-	CCDS23091.1	1	282	0	0	2.7	351.9	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000032392	Parp16	ENSMUST00000213766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032392	Parp16	ENSMUST00000216702	ENSMUSP00000149927	TRANSLATION	protein_coding	-	CCDS23286.1	1	322	0	5	6.3	118.7	1	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000032392	Parp16	ENSMUST00000216486	ENSMUSP00000150997	TRANSLATION	nonsense_mediated_decay	-	-	1	237	0	4	0	87.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032392	Parp16	ENSMUST00000213396	ENSMUSP00000150318	TRANSLATION	protein_coding	-	CCDS23286.1	1	322	0	5	6.3	118.7	1	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000032392	Parp16	ENSMUST00000069000	ENSMUSP00000070098	TRANSLATION	protein_coding	-	CCDS23286.1	1	322	0	5	6.3	118.7	1	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000034837	Gnat1	ENSMUST00000195849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034837	Gnat1	ENSMUST00000192271	ENSMUSP00000141571	TRANSLATION	nonsense_mediated_decay	-	-	3	87	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034837	Gnat1	ENSMUST00000010205	ENSMUSP00000010205	TRANSLATION	protein_coding	-	CCDS23504.1	1	350	24	7.5	19.5	404.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034837	Gnat1	ENSMUST00000195129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034837	Gnat1	ENSMUST00000193188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034837	Gnat1	ENSMUST00000194153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034837	Gnat1	ENSMUST00000194802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091174	Pate10	ENSMUST00000166746	ENSMUSP00000132657	TRANSLATION	protein_coding	-	CCDS52758.1	1	116	4	0	1.5	0	0	1,-2	-	-	4	PRINCIPAL:1
ENSMUSG00000032482	Cspg5	ENSMUST00000197850	ENSMUSP00000143005	TRANSLATION	protein_coding	-	-	5	569	4	0	0	529.8	3	0,-3	-	-	4	MINOR
ENSMUSG00000032482	Cspg5	ENSMUST00000199736	ENSMUSP00000142845	TRANSLATION	protein_coding	-	-	1	458	4	0	0	415.3	3	-4,-5	-	-	4	MINOR
ENSMUSG00000032482	Cspg5	ENSMUST00000196060	ENSMUSP00000143164	TRANSLATION	protein_coding	-	CCDS81085.1	1	539	4	0	0.5	482.5	3	0,-3	-	-	4	MINOR
ENSMUSG00000032482	Cspg5	ENSMUST00000196176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032482	Cspg5	ENSMUST00000035058	ENSMUSP00000035058	TRANSLATION	protein_coding	-	CCDS52936.1	1	566	4	0	0.5	632.2	3	0,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000043067	Dpy19l1	ENSMUST00000115277	ENSMUSP00000110932	TRANSLATION	protein_coding	-	-	2	552	0	0	0	647.6	8	-4,-7	-	-	0	MINOR
ENSMUSG00000043067	Dpy19l1	ENSMUST00000149001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043067	Dpy19l1	ENSMUST00000142064	ENSMUSP00000119986	TRANSLATION	protein_coding	-	CCDS22931.2	5	746	0	0	3.9	808.5	8	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000043067	Dpy19l1	ENSMUST00000152480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043067	Dpy19l1	ENSMUST00000170356	ENSMUSP00000129575	TRANSLATION	protein_coding	-	CCDS22931.2	5	746	0	0	3.9	808.5	8	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000043067	Dpy19l1	ENSMUST00000129048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004661	Arid3b	ENSMUST00000171444	ENSMUSP00000130173	TRANSLATION	protein_coding	-	CCDS23233.1	5	568	0	3.38	0.5	70.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000004661	Arid3b	ENSMUST00000170477	ENSMUSP00000130902	TRANSLATION	protein_coding	stop	-	3	35	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004661	Arid3b	ENSMUST00000171949	ENSMUSP00000127525	TRANSLATION	protein_coding	start	-	2	94	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004661	Arid3b	ENSMUST00000164010	ENSMUSP00000126889	TRANSLATION	protein_coding	-	-	5	240	0	0.962	0	0	0	-4,-7	-	-	1.164	MINOR
ENSMUSG00000004661	Arid3b	ENSMUST00000169563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004661	Arid3b	ENSMUST00000004780	ENSMUSP00000004780	TRANSLATION	protein_coding	-	CCDS23233.1	1	568	0	3.38	0.5	70.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000004661	Arid3b	ENSMUST00000167670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004661	Arid3b	ENSMUST00000164035	ENSMUSP00000131677	TRANSLATION	nonsense_mediated_decay	-	-	1	287	0	1.15	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004661	Arid3b	ENSMUST00000098686	ENSMUSP00000096283	TRANSLATION	protein_coding	-	-	1	536	0	3.38	0	70.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000004661	Arid3b	ENSMUST00000114165	ENSMUSP00000109802	TRANSLATION	nonsense_mediated_decay	-	-	5	212	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032235	Ice2	ENSMUST00000034761	ENSMUSP00000034761	TRANSLATION	protein_coding	-	CCDS23315.1	1	988	0	0	0.5	276.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032235	Ice2	ENSMUST00000125938	ENSMUSP00000117768	TRANSLATION	protein_coding	stop	-	2	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032235	Ice2	ENSMUST00000117246	ENSMUSP00000112700	TRANSLATION	protein_coding	-	-	1	141	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032235	Ice2	ENSMUST00000142743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032235	Ice2	ENSMUST00000131233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032235	Ice2	ENSMUST00000145538	ENSMUSP00000122566	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032235	Ice2	ENSMUST00000146368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032235	Ice2	ENSMUST00000117610	ENSMUSP00000112455	TRANSLATION	protein_coding	-	-	1	98	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032235	Ice2	ENSMUST00000147558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032235	Ice2	ENSMUST00000151667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032405	Pias1	ENSMUST00000214830	ENSMUSP00000150834	TRANSLATION	protein_coding	-	-	1	577	4	8.83	0	205.2	0	-4,-5	-	-	16	MINOR
ENSMUSG00000032405	Pias1	ENSMUST00000098651	ENSMUSP00000096248	TRANSLATION	protein_coding	-	CCDS40665.1	1	651	4	8.83	8.8	205.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000032405	Pias1	ENSMUST00000215455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032405	Pias1	ENSMUST00000216209	ENSMUSP00000149590	TRANSLATION	protein_coding	stop	-	3	222	0	2.95	0	75.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032405	Pias1	ENSMUST00000215501	ENSMUSP00000149235	TRANSLATION	protein_coding	start	-	1	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001774	Chordc1	ENSMUST00000217031	ENSMUSP00000150569	TRANSLATION	protein_coding	stop	-	3	256	16	2.95	0	195.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001774	Chordc1	ENSMUST00000217083	ENSMUSP00000150527	TRANSLATION	nonsense_mediated_decay	-	-	5	184	9	2.35	0	103.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001774	Chordc1	ENSMUST00000213605	ENSMUSP00000149900	TRANSLATION	protein_coding	-	-	2	119	8	2.35	0	103.9	0	-4,-6	-	-	2.802	MINOR
ENSMUSG00000001774	Chordc1	ENSMUST00000216526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001774	Chordc1	ENSMUST00000214441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001774	Chordc1	ENSMUST00000216800	ENSMUSP00000150443	TRANSLATION	nonsense_mediated_decay	-	-	3	113	8	2.35	0	103.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001774	Chordc1	ENSMUST00000215421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001774	Chordc1	ENSMUST00000001825	ENSMUSP00000001825	TRANSLATION	protein_coding	-	CCDS22842.1	1	331	16	4.282	7.1	250.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000001774	Chordc1	ENSMUST00000216666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074269	Rec114	ENSMUST00000186960	ENSMUSP00000139686	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074269	Rec114	ENSMUST00000175792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074269	Rec114	ENSMUST00000186592	ENSMUSP00000139758	TRANSLATION	protein_coding	start	-	5	119	0	0	0	152.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074269	Rec114	ENSMUST00000098674	ENSMUSP00000096271	TRANSLATION	protein_coding	-	CCDS52814.1	1	259	0	0	1.5	339.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000074269	Rec114	ENSMUST00000187632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094588	Olfr898	ENSMUST00000216304	ENSMUSP00000151067	TRANSLATION	protein_coding	-	-	5	310	0	0.2	3.9	160.3	8	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000094588	Olfr898	ENSMUST00000076504	ENSMUSP00000075824	TRANSLATION	protein_coding	-	CCDS23005.1	-	316	0	0.2	1.5	160.3	8	-4,-6	-	-	12.172	PRINCIPAL:2
ENSMUSG00000094588	Olfr898	ENSMUST00000217063	ENSMUSP00000149554	TRANSLATION	protein_coding	-	-	5	310	0	0.2	3.9	160.3	8	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000036027	1810046K07Rik	ENSMUST00000039959	ENSMUSP00000036912	TRANSLATION	protein_coding	-	CCDS52792.1	1	235	0	0	2.9	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000036027	1810046K07Rik	ENSMUST00000238450	ENSMUSP00000158857	TRANSLATION	protein_coding	-	-	-	287	0	0	2.9	21.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000036027	1810046K07Rik	ENSMUST00000181366	ENSMUSP00000137735	TRANSLATION	protein_coding	-	CCDS52792.1	5	235	0	0	2.9	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000059595	Olfr935	ENSMUST00000080748	ENSMUSP00000079572	TRANSLATION	protein_coding	-	CCDS23035.1	-	308	0	0.32	5.2	179.1	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000059595	Olfr935	ENSMUST00000214157	ENSMUSP00000149193	TRANSLATION	protein_coding	-	CCDS23035.1	3	308	0	0.32	5.2	179.1	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032056	Btg4	ENSMUST00000216453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032056	Btg4	ENSMUST00000213680	ENSMUSP00000149181	TRANSLATION	protein_coding	-	CCDS40629.1	1	250	0	2.45	1.5	143.2	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000032056	Btg4	ENSMUST00000214452	ENSMUSP00000150174	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032056	Btg4	ENSMUST00000114431	ENSMUSP00000110074	TRANSLATION	protein_coding	-	CCDS40629.1	1	250	0	2.45	1.5	143.2	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000032056	Btg4	ENSMUST00000213117	ENSMUSP00000151173	TRANSLATION	protein_coding	-	-	1	191	0	2.45	0	143.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000094461	Olfr883	ENSMUST00000072974	ENSMUSP00000072741	TRANSLATION	protein_coding	-	CCDS22993.1	-	309	0	0.32	6.4	163.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032336	Nptn	ENSMUST00000176126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032336	Nptn	ENSMUST00000177021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032336	Nptn	ENSMUST00000177064	ENSMUSP00000135316	TRANSLATION	protein_coding	-	-	5	193	0	3.88	0	49.8	2	4,-1	-	-	1.53	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000085651	ENSMUSP00000082793	TRANSLATION	protein_coding	-	CCDS23245.1	1	281	0	5.88	1.5	82.1	2	4,-1	-	-	7.47	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000177020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032336	Nptn	ENSMUST00000176916	ENSMUSP00000134977	TRANSLATION	nonsense_mediated_decay	-	-	1	171	0	3.598	0	49.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000114121	ENSMUSP00000109756	TRANSLATION	protein_coding	-	-	5	277	0	6.23	1.5	82.1	2	4,-1	-	-	8.166	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000177292	ENSMUSP00000135199	TRANSLATION	protein_coding	-	-	5	397	0	6.88	1.5	124.3	2	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032336	Nptn	ENSMUST00000176896	ENSMUSP00000134761	TRANSLATION	nonsense_mediated_decay	start	-	5	221	0	4.48	0	82.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000175945	ENSMUSP00000135576	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0.48	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000176250	ENSMUSP00000135250	TRANSLATION	protein_coding	-	-	1	171	0	3.598	0	49.8	2	-4,-5	-	-	1.53	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000177380	ENSMUSP00000135886	TRANSLATION	non_stop_decay	stop	-	2	122	0	2.48	0	32.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032336	Nptn	ENSMUST00000176557	ENSMUSP00000135541	TRANSLATION	protein_coding	-	CCDS81009.1	1	277	0	5.88	1.5	82.1	2	4,-1	-	-	7.47	MINOR
ENSMUSG00000047980	Pate5	ENSMUST00000054175	ENSMUSP00000051917	TRANSLATION	protein_coding	-	CCDS52760.1	1	117	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000032733	Snx33	ENSMUST00000050916	ENSMUSP00000060225	TRANSLATION	protein_coding	-	CCDS23212.1	1	574	0	2	6.3	485.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095893	Olfr884	ENSMUST00000077732	ENSMUSP00000076912	TRANSLATION	protein_coding	-	CCDS22994.1	-	309	0	0.2	5.1	171.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095893	Olfr884	ENSMUST00000181088	ENSMUSP00000138035	TRANSLATION	protein_coding	-	CCDS22994.1	2	309	0	0.2	5.1	171.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032105	Pdzd3	ENSMUST00000213186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032105	Pdzd3	ENSMUST00000034618	ENSMUSP00000034618	TRANSLATION	protein_coding	-	CCDS23099.1	1	498	0	4.786	1.5	140.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049708	Olfr27	ENSMUST00000214052	ENSMUSP00000151012	TRANSLATION	protein_coding	-	CCDS40590.1	3	311	0	0.36	1.5	166.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049708	Olfr27	ENSMUST00000216405	ENSMUSP00000150009	TRANSLATION	protein_coding	-	CCDS40590.1	5	311	0	0.36	1.5	166.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037419	Endod1	ENSMUST00000213403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037419	Endod1	ENSMUST00000167549	ENSMUSP00000127751	TRANSLATION	protein_coding	-	CCDS22821.1	1	501	0	0.14	1.5	0	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000037419	Endod1	ENSMUST00000214236	ENSMUSP00000149823	TRANSLATION	protein_coding	-	-	3	104	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000066896	Olfr18	ENSMUST00000212943	ENSMUSP00000153832	TRANSLATION	protein_coding	-	-	1	323	0	0.36	0	181.4	5	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000066896	Olfr18	ENSMUST00000086473	ENSMUSP00000083664	TRANSLATION	protein_coding	-	CCDS40542.1	1	331	0	0.36	1.5	181.4	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000066896	Olfr18	ENSMUST00000211895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032344	Cgas	ENSMUST00000070742	ENSMUSP00000063331	TRANSLATION	protein_coding	-	CCDS40702.1	1	507	24	5.5	1.5	274.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000032344	Cgas	ENSMUST00000034898	ENSMUSP00000034898	TRANSLATION	protein_coding	-	-	1	394	20	4	0	155	0	-4,-7	-	-	6.336	MINOR
ENSMUSG00000032344	Cgas	ENSMUST00000127190	ENSMUSP00000114277	TRANSLATION	nonsense_mediated_decay	start	-	1	230	6	2	0	52.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038233	Gask1a	ENSMUST00000215990	ENSMUSP00000149755	TRANSLATION	protein_coding	-	-	1	562	0	0	0.5	490.2	0	0,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000038233	Gask1a	ENSMUST00000214536	ENSMUSP00000150724	TRANSLATION	protein_coding	-	-	1	527	0	0	0.5	381.6	0	0,-4	-	-	0	MINOR
ENSMUSG00000038233	Gask1a	ENSMUST00000043011	ENSMUSP00000040221	TRANSLATION	protein_coding	-	CCDS52969.1	1	546	0	0	0.5	490.2	0	2,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000038233	Gask1a	ENSMUST00000213773	ENSMUSP00000151175	TRANSLATION	protein_coding	-	CCDS52969.1	1	546	0	0	0.5	490.2	0	2,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000050074	Spink8	ENSMUST00000200555	ENSMUSP00000142856	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050074	Spink8	ENSMUST00000198988	ENSMUSP00000142586	TRANSLATION	protein_coding	-	CCDS40777.1	1	105	0	1.3	1.5	40.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050074	Spink8	ENSMUST00000118732	ENSMUSP00000112990	TRANSLATION	protein_coding	-	-	1	95	0	0.8	0	30.6	0	3,-2	-	-	8.244	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000213718	ENSMUSP00000149197	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000216277	ENSMUSP00000150786	TRANSLATION	nonsense_mediated_decay	start	-	3	61	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000214900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002825	Qtrt1	ENSMUST00000214101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002825	Qtrt1	ENSMUST00000216527	ENSMUSP00000149808	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000002902	ENSMUSP00000002902	TRANSLATION	protein_coding	-	CCDS52735.1	1	403	13	9.45	7.6	290.5	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000002825	Qtrt1	ENSMUST00000217060	ENSMUSP00000149752	TRANSLATION	protein_coding	start	-	2	112	4	2	0	77.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000213967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002825	Qtrt1	ENSMUST00000214681	ENSMUSP00000148877	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002825	Qtrt1	ENSMUST00000214128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002825	Qtrt1	ENSMUST00000217188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066357	Wdr6	ENSMUST00000068700	ENSMUSP00000070927	TRANSLATION	protein_coding	-	CCDS23532.2	1	1125	0	0	1.5	51.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032218	Ccnb2	ENSMUST00000034742	ENSMUSP00000034742	TRANSLATION	protein_coding	-	CCDS23320.1	1	398	0	5.6	6.3	262.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046480	Scn4b	ENSMUST00000060125	ENSMUSP00000062507	TRANSLATION	protein_coding	-	CCDS23130.1	1	228	0	2.2	6.3	43.5	0	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000049511	Htr1b	ENSMUST00000051005	ENSMUSP00000050898	TRANSLATION	protein_coding	-	CCDS23370.1	-	386	0	0.7	1.5	265.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049511	Htr1b	ENSMUST00000183482	ENSMUSP00000139389	TRANSLATION	protein_coding	-	CCDS23370.1	3	386	0	0.7	1.5	265.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040563	Plppr2	ENSMUST00000046371	ENSMUSP00000038616	TRANSLATION	protein_coding	-	CCDS72203.1	1	452	0	0	6.3	54.5	12	-2,-4	-	-	8	PRINCIPAL:3
ENSMUSG00000040563	Plppr2	ENSMUST00000190387	ENSMUSP00000139727	TRANSLATION	protein_coding	-	CCDS80966.1	1	343	0	0	5.1	54.5	12	-2,-4	-	-	7.548	ALTERNATIVE:1
ENSMUSG00000040563	Plppr2	ENSMUST00000188468	ENSMUSP00000140166	TRANSLATION	protein_coding	-	-	5	427	0	0	2.4	54.5	10	-3,-6	-	-	6.528	MINOR
ENSMUSG00000057933	Gsta2	ENSMUST00000034902	ENSMUSP00000034902	TRANSLATION	protein_coding	-	CCDS23359.1	1	222	10	5.25	7.5	143.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000057933	Gsta2	ENSMUST00000129247	ENSMUSP00000117101	TRANSLATION	protein_coding	stop	-	3	179	10	4.25	0	128.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057933	Gsta2	ENSMUST00000140498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057933	Gsta2	ENSMUST00000125479	ENSMUSP00000115517	TRANSLATION	protein_coding	stop	-	3	182	10	4.25	0	132.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032181	Scg3	ENSMUST00000214176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032181	Scg3	ENSMUST00000213324	ENSMUSP00000149561	TRANSLATION	protein_coding	-	-	1	466	0	0	0.5	702.1	0	3,-1	-	-	5.772	MINOR
ENSMUSG00000032181	Scg3	ENSMUST00000214244	ENSMUSP00000151074	TRANSLATION	protein_coding	stop	-	2	84	0	0	0	36.6	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032181	Scg3	ENSMUST00000215603	ENSMUSP00000152480	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	0	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032181	Scg3	ENSMUST00000034699	ENSMUSP00000034699	TRANSLATION	protein_coding	-	CCDS23347.1	1	471	0	0	6.3	705.9	0	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000032181	Scg3	ENSMUST00000215722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032181	Scg3	ENSMUST00000213637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032451	Trim42	ENSMUST00000035026	ENSMUSP00000035026	TRANSLATION	protein_coding	-	CCDS23422.1	1	723	20	0.56	3.9	58.2	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000011958	Bnip2	ENSMUST00000034754	ENSMUSP00000034754	TRANSLATION	protein_coding	-	CCDS23319.1	1	326	0	0	2.7	222.7	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000011958	Bnip2	ENSMUST00000085393	ENSMUSP00000082513	TRANSLATION	protein_coding	-	CCDS23318.1	1	314	0	0	2.7	220.1	0	-4,-5	-	-	5.844	ALTERNATIVE:2
ENSMUSG00000011958	Bnip2	ENSMUST00000165389	ENSMUSP00000133200	TRANSLATION	protein_coding	-	CCDS23318.1	1	314	0	0	2.7	220.1	0	-4,-5	-	-	5.844	ALTERNATIVE:2
ENSMUSG00000011958	Bnip2	ENSMUST00000154772	ENSMUSP00000117957	TRANSLATION	nonsense_mediated_decay	-	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011958	Bnip2	ENSMUST00000137472	ENSMUSP00000115106	TRANSLATION	protein_coding	start	-	3	86	0	0	0	53.9	0	-3,0	-	-	-1	MINOR
ENSMUSG00000011958	Bnip2	ENSMUST00000133307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011958	Bnip2	ENSMUST00000117450	ENSMUSP00000113466	TRANSLATION	protein_coding	-	-	1	348	0	0	0.5	219.1	0	-4,-5	-	-	5.784	ALTERNATIVE:2
ENSMUSG00000011958	Bnip2	ENSMUST00000143049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032523	Hhatl	ENSMUST00000163981	ENSMUSP00000131971	TRANSLATION	protein_coding	-	CCDS23638.1	1	503	0	0	7.5	48.2	9	-2,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000032523	Hhatl	ENSMUST00000217652	ENSMUSP00000150721	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032523	Hhatl	ENSMUST00000035110	ENSMUSP00000035110	TRANSLATION	protein_coding	-	CCDS23638.1	1	503	0	0	7.5	48.2	9	-2,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000032523	Hhatl	ENSMUST00000214768	ENSMUSP00000149486	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	0	6	-2,-3	-	-	-1	MINOR
ENSMUSG00000032523	Hhatl	ENSMUST00000215477	ENSMUSP00000150866	TRANSLATION	protein_coding	stop	-	5	64	0	0	0	0	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000032523	Hhatl	ENSMUST00000215910	ENSMUSP00000149350	TRANSLATION	protein_coding	stop	-	5	64	0	0	0	0	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000032435	Dync1li1	ENSMUST00000047404	ENSMUSP00000035366	TRANSLATION	protein_coding	-	CCDS23595.1	1	523	18	3.59	6.3	847.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000032435	Dync1li1	ENSMUST00000215345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032021	Crtam	ENSMUST00000180384	ENSMUSP00000137837	TRANSLATION	protein_coding	-	CCDS72216.1	1	393	0	2.9	0.5	89.6	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000032021	Crtam	ENSMUST00000034519	ENSMUSP00000034519	TRANSLATION	protein_coding	-	-	5	386	0	2.9	0	89.6	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000032021	Crtam	ENSMUST00000180872	ENSMUSP00000137749	TRANSLATION	protein_coding	-	-	1	196	0	0	0	0	2	-2,-4	-	-	0	MINOR
ENSMUSG00000032021	Crtam	ENSMUST00000188848	ENSMUSP00000139826	TRANSLATION	protein_coding	-	CCDS40593.2	1	392	0	2.9	0.5	89.6	2	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000004100	Ppan	ENSMUST00000004203	ENSMUSP00000004203	TRANSLATION	protein_coding	-	CCDS22887.1	1	470	0	0	1.5	154.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000004100	Ppan	ENSMUST00000153227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004100	Ppan	ENSMUST00000145231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004100	Ppan	ENSMUST00000135608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004100	Ppan	ENSMUST00000214331	ENSMUSP00000149658	TRANSLATION	nonsense_mediated_decay	-	-	5	193	0	0	0	100.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000004100	Ppan	ENSMUST00000147780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004100	Ppan	ENSMUST00000157047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000213457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000047349	ENSMUSP00000047467	TRANSLATION	protein_coding	-	CCDS40613.1	1	1051	4	8.06	1.5	174.9	0	-4,-5	-	-	15.982	PRINCIPAL:2
ENSMUSG00000032267	Usp28	ENSMUST00000216607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000215850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000215118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000216657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000215788	ENSMUSP00000150005	TRANSLATION	protein_coding	stop	-	2	127	0	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032267	Usp28	ENSMUST00000213874	ENSMUSP00000149207	TRANSLATION	protein_coding	-	-	1	1026	4	8.06	0	175.2	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000032267	Usp28	ENSMUST00000215378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032267	Usp28	ENSMUST00000215856	ENSMUSP00000150707	TRANSLATION	protein_coding	start	-	1	698	2	1.54	0	65.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095903	Olfr968	ENSMUST00000075928	ENSMUSP00000096472	TRANSLATION	protein_coding	-	CCDS23060.1	-	314	0	0.42	1.5	174.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095903	Olfr968	ENSMUST00000216458	ENSMUSP00000148969	TRANSLATION	protein_coding	-	CCDS23060.1	5	314	0	0.42	1.5	174.4	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032078	Zpr1	ENSMUST00000143511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032078	Zpr1	ENSMUST00000125239	ENSMUSP00000123437	TRANSLATION	nonsense_mediated_decay	start	-	5	62	2	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032078	Zpr1	ENSMUST00000114552	ENSMUSP00000110199	TRANSLATION	protein_coding	start	-	5	386	6	10.1	0	278	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032078	Zpr1	ENSMUST00000125791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032078	Zpr1	ENSMUST00000141763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032078	Zpr1	ENSMUST00000156440	ENSMUSP00000117725	TRANSLATION	protein_coding	-	CCDS23144.1	1	459	8	12.1	6.3	376.9	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000062649	Olfr44	ENSMUST00000215065	ENSMUSP00000148986	TRANSLATION	protein_coding	-	-	5	311	0	0.36	5.2	169.2	7	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000062649	Olfr44	ENSMUST00000216316	ENSMUSP00000150827	TRANSLATION	protein_coding	-	-	3	311	0	0.36	5.2	169.2	7	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000062649	Olfr44	ENSMUST00000077757	ENSMUSP00000076935	TRANSLATION	protein_coding	-	CCDS23048.1	3	314	0	0.36	5.2	169.2	7	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000059890	Ube4a	ENSMUST00000145657	ENSMUSP00000115311	TRANSLATION	nonsense_mediated_decay	-	-	2	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000155400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059890	Ube4a	ENSMUST00000213666	ENSMUSP00000150985	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000117506	ENSMUSP00000113346	TRANSLATION	protein_coding	-	CCDS23122.2	1	1028	0	6.38	0.5	386.1	0	-4,-5	-	-	5.04	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000125642	ENSMUSP00000118951	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000138559	ENSMUSP00000149791	TRANSLATION	protein_coding	-	-	1	406	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000154287	ENSMUSP00000123668	TRANSLATION	nonsense_mediated_decay	-	-	1	547	0	1.4	0	101.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000213193	ENSMUSP00000150919	TRANSLATION	protein_coding	stop	-	2	206	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000213890	ENSMUSP00000149477	TRANSLATION	protein_coding	stop	-	2	197	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000214761	ENSMUSP00000151085	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059890	Ube4a	ENSMUST00000117549	ENSMUSP00000112632	TRANSLATION	protein_coding	-	CCDS85670.1	5	1085	0	6.86	1.5	618.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032269	Htr3a	ENSMUST00000217289	ENSMUSP00000150647	TRANSLATION	protein_coding	-	-	1	483	0	7.5	2.7	322.7	3	3,-2	-	-	11.25	ALTERNATIVE:2
ENSMUSG00000032269	Htr3a	ENSMUST00000003826	ENSMUSP00000003826	TRANSLATION	protein_coding	-	CCDS52788.1	1	489	0	7.632	1.5	330.8	3	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000053641	Dennd4a	ENSMUST00000213926	ENSMUSP00000150918	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053641	Dennd4a	ENSMUST00000216098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053641	Dennd4a	ENSMUST00000038890	ENSMUSP00000037915	TRANSLATION	protein_coding	-	CCDS52834.1	5	1869	4	2.17	1.5	316.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000053641	Dennd4a	ENSMUST00000217307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053641	Dennd4a	ENSMUST00000214029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053641	Dennd4a	ENSMUST00000213437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053641	Dennd4a	ENSMUST00000215025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053641	Dennd4a	ENSMUST00000214001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053641	Dennd4a	ENSMUST00000213744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063488	Zkscan7	ENSMUST00000215872	ENSMUSP00000150648	TRANSLATION	protein_coding	-	-	5	283	0	1	0	136.8	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000063488	Zkscan7	ENSMUST00000216429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063488	Zkscan7	ENSMUST00000063980	ENSMUSP00000071695	TRANSLATION	protein_coding	-	CCDS52970.1	1	718	43	1.6	0.5	341.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032092	Mpzl2	ENSMUST00000034600	ENSMUSP00000034600	TRANSLATION	protein_coding	-	CCDS23126.1	1	215	0	2.35	1.5	76.7	1	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032092	Mpzl2	ENSMUST00000215886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032092	Mpzl2	ENSMUST00000217097	ENSMUSP00000150395	TRANSLATION	protein_coding	-	-	5	135	0	1.75	0.5	41.9	1	-4,-6	-	-	7.746	MINOR
ENSMUSG00000032092	Mpzl2	ENSMUST00000215292	ENSMUSP00000150054	TRANSLATION	protein_coding	stop	-	5	170	0	1.6	0	69.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000032092	Mpzl2	ENSMUST00000216777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059366	Olfr959	ENSMUST00000215194	ENSMUSP00000150481	TRANSLATION	protein_coding	-	CCDS23051.1	5	311	0	0.36	7.6	165.8	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059366	Olfr959	ENSMUST00000079178	ENSMUSP00000078176	TRANSLATION	protein_coding	-	CCDS23051.1	-	311	0	0.36	7.6	165.8	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059366	Olfr959	ENSMUST00000216298	ENSMUSP00000150349	TRANSLATION	protein_coding	-	CCDS23051.1	5	311	0	0.36	7.6	165.8	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057551	Zfp317	ENSMUST00000213725	ENSMUSP00000151161	TRANSLATION	protein_coding	-	-	1	518	54	0.4	0	260.6	0	-4,-7	-	-	8.868	MINOR
ENSMUSG00000057551	Zfp317	ENSMUST00000214731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057551	Zfp317	ENSMUST00000215372	ENSMUSP00000150705	TRANSLATION	protein_coding	-	CCDS22862.1	1	607	54	1.4	1.5	341.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057551	Zfp317	ENSMUST00000208694	ENSMUSP00000146876	TRANSLATION	protein_coding	-	CCDS22862.1	1	607	54	1.4	1.5	341.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057551	Zfp317	ENSMUST00000079042	ENSMUSP00000078051	TRANSLATION	protein_coding	-	CCDS22862.1	2	607	54	1.4	1.5	341.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025787	Tgm4	ENSMUST00000128572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025787	Tgm4	ENSMUST00000214552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025787	Tgm4	ENSMUST00000171897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025787	Tgm4	ENSMUST00000143364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025787	Tgm4	ENSMUST00000026893	ENSMUSP00000026893	TRANSLATION	protein_coding	-	CCDS23653.1	1	670	4	10.624	0.5	208.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000025787	Tgm4	ENSMUST00000217607	ENSMUSP00000149061	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	1.584	0	64.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025787	Tgm4	ENSMUST00000215247	ENSMUSP00000149120	TRANSLATION	protein_coding	-	-	2	246	1	2.464	0	67.1	0	-4,-5	-	-	1	MINOR
ENSMUSG00000074102	Rbm15b	ENSMUST00000055843	ENSMUSP00000059330	TRANSLATION	protein_coding	-	CCDS52915.1	-	887	0	1.22	1.5	211.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074102	Rbm15b	ENSMUST00000185707	ENSMUSP00000139726	TRANSLATION	protein_coding	start	-	5	193	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013419	Zfp651	ENSMUST00000214732	ENSMUSP00000150384	TRANSLATION	nonsense_mediated_decay	start	-	5	627	12	0.8	0	103	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000013419	Zfp651	ENSMUST00000093772	ENSMUSP00000091286	TRANSLATION	protein_coding	-	CCDS52968.1	5	729	32	3.65	1.5	169.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000013419	Zfp651	ENSMUST00000215081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013419	Zfp651	ENSMUST00000213743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044664	Prss42	ENSMUST00000035715	ENSMUSP00000041088	TRANSLATION	protein_coding	-	CCDS23572.1	1	335	6	3.08	0.5	221.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000070284	Gmppb	ENSMUST00000112295	ENSMUSP00000107914	TRANSLATION	protein_coding	-	CCDS23515.1	1	360	27	5.54	12.8	36.9	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000070284	Gmppb	ENSMUST00000047947	ENSMUSP00000036898	TRANSLATION	protein_coding	-	CCDS23515.1	1	360	27	5.54	12.8	36.9	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000070284	Gmppb	ENSMUST00000145330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070284	Gmppb	ENSMUST00000150700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070284	Gmppb	ENSMUST00000137284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011118	Panx3	ENSMUST00000215047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011118	Panx3	ENSMUST00000142228	ENSMUSP00000114539	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000011118	Panx3	ENSMUST00000011262	ENSMUSP00000011262	TRANSLATION	protein_coding	-	CCDS22984.1	1	392	0	0	8.8	38.5	3	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000045519	Zfp560	ENSMUST00000068079	ENSMUSP00000065620	TRANSLATION	protein_coding	-	CCDS22877.1	1	754	60	1.4	0.5	435.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045519	Zfp560	ENSMUST00000143992	ENSMUSP00000150927	TRANSLATION	protein_coding	-	-	1	39	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045519	Zfp560	ENSMUST00000214965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025786	Zdhhc3	ENSMUST00000123937	ENSMUSP00000114613	TRANSLATION	nonsense_mediated_decay	-	-	3	122	0	0	0	0	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000140497	ENSMUSP00000122604	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	0	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000138622	ENSMUSP00000119750	TRANSLATION	nonsense_mediated_decay	-	-	1	122	0	0	0	0	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000238520	ENSMUSP00000158842	TRANSLATION	protein_coding	-	-	-	332	7	0	2.7	125	12	-4,-7	-	-	12.51	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000130717	ENSMUSP00000121712	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000026892	ENSMUSP00000026892	TRANSLATION	nonsense_mediated_decay	-	-	1	128	0	0	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000129862	ENSMUSP00000119360	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	4	3,-2	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000152396	ENSMUSP00000116222	TRANSLATION	nonsense_mediated_decay	-	-	5	154	0	0	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000129151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025786	Zdhhc3	ENSMUST00000147563	ENSMUSP00000117392	TRANSLATION	protein_coding	-	CCDS23654.1	1	299	7	0	8.8	127.4	12	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025786	Zdhhc3	ENSMUST00000155778	ENSMUSP00000119416	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	0	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000025786	Zdhhc3	ENSMUST00000150679	ENSMUSP00000116526	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	0	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000032018	Sc5d	ENSMUST00000052725	ENSMUSP00000057354	TRANSLATION	protein_coding	-	CCDS23086.1	1	299	0	0	6.3	84.8	4	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000032018	Sc5d	ENSMUST00000169609	ENSMUSP00000130438	TRANSLATION	protein_coding	-	CCDS23086.1	1	299	0	0	6.3	84.8	4	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000032018	Sc5d	ENSMUST00000217513	ENSMUSP00000149891	TRANSLATION	protein_coding	stop	-	3	215	0	0	0	51.3	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000053128	Rnf26	ENSMUST00000160985	ENSMUSP00000124568	TRANSLATION	nonsense_mediated_decay	start	-	2	64	8	0.56	0	54.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053128	Rnf26	ENSMUST00000215685	ENSMUSP00000150766	TRANSLATION	protein_coding	-	-	5	181	0	0	0	0	2	-1,-5	-	-	0	MINOR
ENSMUSG00000053128	Rnf26	ENSMUST00000056328	ENSMUSP00000110478	TRANSLATION	protein_coding	-	CCDS23096.1	-	424	8	0.56	1.5	54.1	5	-1,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000053128	Rnf26	ENSMUST00000162196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053128	Rnf26	ENSMUST00000216511	ENSMUSP00000148925	TRANSLATION	protein_coding	-	-	5	303	8	0.56	0	54.1	3	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000053128	Rnf26	ENSMUST00000065379	ENSMUSP00000070060	TRANSLATION	nonsense_mediated_decay	-	-	2	424	8	0.56	1.5	54.1	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000042790	Rnf214	ENSMUST00000162369	ENSMUSP00000149889	TRANSLATION	nonsense_mediated_decay	-	-	2	714	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042790	Rnf214	ENSMUST00000100407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042790	Rnf214	ENSMUST00000215005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042790	Rnf214	ENSMUST00000160868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042790	Rnf214	ENSMUST00000160325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042790	Rnf214	ENSMUST00000161203	ENSMUSP00000123995	TRANSLATION	protein_coding	-	CCDS80988.1	1	548	8	0	3.9	0	0	-4,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000042790	Rnf214	ENSMUST00000160699	ENSMUSP00000123754	TRANSLATION	protein_coding	-	CCDS23136.1	1	668	8	0	1.5	0	0	-4,-5	-	-	6.172	PRINCIPAL:3
ENSMUSG00000042790	Rnf214	ENSMUST00000162699	ENSMUSP00000125351	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042790	Rnf214	ENSMUST00000160469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042790	Rnf214	ENSMUST00000213659	ENSMUSP00000149012	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042790	Rnf214	ENSMUST00000058720	ENSMUSP00000060941	TRANSLATION	protein_coding	-	CCDS23136.1	1	668	8	0	1.5	0	0	-4,-5	-	-	6.172	PRINCIPAL:3
ENSMUSG00000042790	Rnf214	ENSMUST00000160811	ENSMUSP00000125420	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042790	Rnf214	ENSMUST00000161187	ENSMUSP00000124296	TRANSLATION	protein_coding	-	CCDS80987.1	1	513	8	0	1.5	0	0	-4,-5	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000111709	Gm3776	ENSMUST00000217203	ENSMUSP00000150224	TRANSLATION	protein_coding	-	-	1	223	10	5.25	7.5	140.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000032290	Ptpn9	ENSMUST00000034832	ENSMUSP00000034832	TRANSLATION	protein_coding	-	CCDS23215.1	1	593	11	7.46	5.1	387.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032290	Ptpn9	ENSMUST00000216034	ENSMUSP00000150426	TRANSLATION	protein_coding	start/stop	-	3	144	0	0.96	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032290	Ptpn9	ENSMUST00000213500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032290	Ptpn9	ENSMUST00000215707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074179	Gm10639	ENSMUST00000119823	ENSMUSP00000113211	TRANSLATION	protein_coding	-	CCDS52866.1	5	222	11	5.25	7.5	139.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000074179	Gm10639	ENSMUST00000126625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074179	Gm10639	ENSMUST00000121273	ENSMUSP00000113635	TRANSLATION	protein_coding	-	CCDS52866.1	1	222	11	5.25	7.5	139.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000044106	Olfr868	ENSMUST00000212767	ENSMUSP00000148634	TRANSLATION	protein_coding	-	CCDS22870.1	3	309	0	0.36	1.5	169.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044106	Olfr868	ENSMUST00000215566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044106	Olfr868	ENSMUST00000212999	ENSMUSP00000148302	TRANSLATION	protein_coding	-	CCDS22870.1	3	309	0	0.36	1.5	169.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036867	Smad6	ENSMUST00000144323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036867	Smad6	ENSMUST00000179458	ENSMUSP00000137442	TRANSLATION	protein_coding	-	-	-	90	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000036867	Smad6	ENSMUST00000041029	ENSMUSP00000036285	TRANSLATION	protein_coding	-	CCDS23273.1	1	495	4	1.09	1.5	278	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000032417	Rwdd2a	ENSMUST00000179212	ENSMUSP00000137392	TRANSLATION	protein_coding	-	CCDS23382.1	1	292	0	1.6	7.5	96	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000032417	Rwdd2a	ENSMUST00000034988	ENSMUSP00000034988	TRANSLATION	protein_coding	-	CCDS23382.1	1	292	0	1.6	7.5	96	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000032417	Rwdd2a	ENSMUST00000185566	ENSMUSP00000139930	TRANSLATION	protein_coding	-	CCDS23382.1	2	292	0	1.6	7.5	96	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000111700	Gm49385	ENSMUST00000215291	ENSMUSP00000149276	TRANSLATION	polymorphic_pseudogene,RT	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000032446	Eomes	ENSMUST00000035020	ENSMUSP00000035020	TRANSLATION	protein_coding	-	CCDS23603.1	1	707	0	3.75	0.5	582	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000032446	Eomes	ENSMUST00000150633	ENSMUSP00000118079	TRANSLATION	protein_coding	start	-	1	395	0	3.75	0	254.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032446	Eomes	ENSMUST00000111763	ENSMUSP00000107393	TRANSLATION	protein_coding	-	CCDS52960.1	1	688	0	3.75	0.5	582	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000032077	Bud13	ENSMUST00000138498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032077	Bud13	ENSMUST00000154247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032077	Bud13	ENSMUST00000074957	ENSMUSP00000074490	TRANSLATION	protein_coding	-	CCDS23145.1	1	637	0	1.35	1.5	174.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032077	Bud13	ENSMUST00000213932	ENSMUSP00000150076	TRANSLATION	protein_coding	start	-	3	185	0	1.35	0	174.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032077	Bud13	ENSMUST00000213338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032077	Bud13	ENSMUST00000124887	ENSMUSP00000114276	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000070291	Ddx43	ENSMUST00000113367	ENSMUSP00000108994	TRANSLATION	protein_coding	-	CCDS52870.1	5	646	20	11.2	1.5	288.9	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000034584	Exph5	ENSMUST00000051014	ENSMUSP00000062632	TRANSLATION	protein_coding	-	CCDS23181.1	1	1960	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000034584	Exph5	ENSMUST00000132410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034584	Exph5	ENSMUST00000139096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025602	Zfp202	ENSMUST00000026693	ENSMUSP00000026693	TRANSLATION	protein_coding	-	CCDS23079.1	1	641	32	1.6	1.5	345.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025602	Zfp202	ENSMUST00000168832	ENSMUSP00000132131	TRANSLATION	protein_coding	-	-	1	277	0	1	0.5	190.1	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000025602	Zfp202	ENSMUST00000168691	ENSMUSP00000130163	TRANSLATION	nonsense_mediated_decay	-	-	1	133	0	1	0	143.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062867	Impdh2	ENSMUST00000081111	ENSMUSP00000079888	TRANSLATION	protein_coding	-	CCDS40768.1	1	514	39	12.33	18.3	517.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000062867	Impdh2	ENSMUST00000194689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062867	Impdh2	ENSMUST00000195456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062867	Impdh2	ENSMUST00000194904	ENSMUSP00000142305	TRANSLATION	protein_coding	start/stop	-	3	320	25	6.375	0	322	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062867	Impdh2	ENSMUST00000193493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062867	Impdh2	ENSMUST00000193535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062867	Impdh2	ENSMUST00000193421	ENSMUSP00000142117	TRANSLATION	protein_coding	stop	-	5	248	17	5.5	0	158.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062867	Impdh2	ENSMUST00000194365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025785	Exosc7	ENSMUST00000215590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025785	Exosc7	ENSMUST00000216412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025785	Exosc7	ENSMUST00000026891	ENSMUSP00000026891	TRANSLATION	protein_coding	-	CCDS40815.1	1	291	0	8.08	17.5	131.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025785	Exosc7	ENSMUST00000214741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025785	Exosc7	ENSMUST00000159376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025785	Exosc7	ENSMUST00000161569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025785	Exosc7	ENSMUST00000215377	ENSMUSP00000150152	TRANSLATION	protein_coding	start/stop	-	5	144	0	3.53	0	51.8	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000032419	Tbx18	ENSMUST00000186698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032419	Tbx18	ENSMUST00000034991	ENSMUSP00000034991	TRANSLATION	protein_coding	-	CCDS40718.1	1	613	0	4.05	4.1	266.3	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000041444	Arhgap32	ENSMUST00000183121	ENSMUSP00000138584	TRANSLATION	protein_coding	stop	-	5	91	0	2.75	0	35.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041444	Arhgap32	ENSMUST00000182802	ENSMUSP00000138145	TRANSLATION	protein_coding	-	CCDS22951.3	1	1740	0	6.25	1.5	152.1	0	-4,-5	-	-	8.688	MINOR
ENSMUSG00000041444	Arhgap32	ENSMUST00000168954	ENSMUSP00000128448	TRANSLATION	protein_coding	-	CCDS22951.3	5	1740	0	6.25	1.5	152.1	0	-4,-5	-	-	8.688	MINOR
ENSMUSG00000041444	Arhgap32	ENSMUST00000174730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041444	Arhgap32	ENSMUST00000182310	ENSMUSP00000138636	TRANSLATION	protein_coding	start/stop	-	5	180	0	0	0	22.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041444	Arhgap32	ENSMUST00000174314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041444	Arhgap32	ENSMUST00000174641	ENSMUSP00000133898	TRANSLATION	protein_coding	-	CCDS57666.1	5	2089	0	6.25	1.5	207.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062762	Ei24	ENSMUST00000239021	ENSMUSP00000159069	TRANSLATION	protein_coding	-	CCDS22973.1	-	358	0	0	0.5	69.6	4	-4,-7	-	-	6	MINOR
ENSMUSG00000062762	Ei24	ENSMUST00000115086	ENSMUSP00000110738	TRANSLATION	protein_coding	-	CCDS22973.1	1	358	0	0	0.5	69.6	4	-4,-7	-	-	6	MINOR
ENSMUSG00000062762	Ei24	ENSMUST00000183430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062762	Ei24	ENSMUST00000163192	ENSMUSP00000132270	TRANSLATION	protein_coding	-	-	1	340	0	0	14.5	69.6	4	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000062762	Ei24	ENSMUST00000217339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062762	Ei24	ENSMUST00000238932	ENSMUSP00000159090	TRANSLATION	protein_coding	-	-	-	340	0	0	14.5	69.6	4	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000062762	Ei24	ENSMUST00000184395	ENSMUSP00000139150	TRANSLATION	protein_coding	stop	-	3	163	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000062762	Ei24	ENSMUST00000183422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062762	Ei24	ENSMUST00000183360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062762	Ei24	ENSMUST00000184235	ENSMUSP00000139319	TRANSLATION	protein_coding	start/stop	-	3	171	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000062762	Ei24	ENSMUST00000185124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070305	Mpzl3	ENSMUST00000114664	ENSMUSP00000110312	TRANSLATION	protein_coding	-	CCDS52781.1	1	237	0	1.6	1.5	69.4	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000070305	Mpzl3	ENSMUST00000186268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070305	Mpzl3	ENSMUST00000093856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070305	Mpzl3	ENSMUST00000187113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070305	Mpzl3	ENSMUST00000114663	ENSMUSP00000110311	TRANSLATION	nonsense_mediated_decay	-	-	3	82	0	0.6	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000182920	ENSMUSP00000138266	TRANSLATION	protein_coding	stop	-	3	37	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000182384	ENSMUSP00000138552	TRANSLATION	protein_coding	-	-	5	627	0	3.99	1.5	264	0	-4,-5	-	-	7.074	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000182413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040875	Osbpl10	ENSMUST00000183104	ENSMUSP00000138287	TRANSLATION	protein_coding	-	-	5	766	0	5.19	1.7	306.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040875	Osbpl10	ENSMUST00000183141	ENSMUSP00000138760	TRANSLATION	protein_coding	stop	-	3	172	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000182363	ENSMUSP00000159129	TRANSLATION	protein_coding	-	-	1	377	0	0.9	0	152.1	0	-4,-1	-	-	0	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000046627	ENSMUSP00000038013	TRANSLATION	protein_coding	-	CCDS40796.1	1	591	0	2.74	0.5	264	0	-3,1	-	-	4.572	MINOR
ENSMUSG00000040875	Osbpl10	ENSMUST00000182199	ENSMUSP00000138206	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	1.382	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015656	Hspa8	ENSMUST00000215526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015656	Hspa8	ENSMUST00000117870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015656	Hspa8	ENSMUST00000117557	ENSMUSP00000113722	TRANSLATION	protein_coding	-	-	1	627	19	8.75	0	800	0	-4,-5	-	-	12.366	MINOR
ENSMUSG00000015656	Hspa8	ENSMUST00000015800	ENSMUSP00000015800	TRANSLATION	protein_coding	-	CCDS23083.1	1	646	19	9.25	11.6	877.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015656	Hspa8	ENSMUST00000140984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015656	Hspa8	ENSMUST00000127699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015656	Hspa8	ENSMUST00000138895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015656	Hspa8	ENSMUST00000153847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015656	Hspa8	ENSMUST00000133964	ENSMUSP00000117285	TRANSLATION	protein_coding	stop	-	2	116	5	2	0	154.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015656	Hspa8	ENSMUST00000149936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037784	Dzip1l	ENSMUST00000190893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037784	Dzip1l	ENSMUST00000112884	ENSMUSP00000108505	TRANSLATION	protein_coding	-	CCDS81060.1	5	773	4	0	1.5	151.7	0	-4,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000037784	Dzip1l	ENSMUST00000131095	ENSMUSP00000116647	TRANSLATION	protein_coding	stop	-	1	125	0	0	0	140	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037784	Dzip1l	ENSMUST00000078367	ENSMUSP00000077475	TRANSLATION	protein_coding	-	CCDS23436.1	1	774	4	0	1.5	151.7	0	-4,-6	-	-	10	PRINCIPAL:3
ENSMUSG00000037784	Dzip1l	ENSMUST00000134969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037784	Dzip1l	ENSMUST00000112885	ENSMUSP00000108506	TRANSLATION	protein_coding	-	CCDS23436.1	1	774	4	0	1.5	151.7	0	-4,-6	-	-	10	PRINCIPAL:3
ENSMUSG00000037784	Dzip1l	ENSMUST00000112886	ENSMUSP00000108507	TRANSLATION	protein_coding	-	CCDS81060.1	1	773	4	0	1.5	151.7	0	-4,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000032534	Cep63	ENSMUST00000093791	ENSMUSP00000091306	TRANSLATION	protein_coding	-	CCDS40743.1	1	758	0	0	0.5	364.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000215253	ENSMUSP00000150702	TRANSLATION	protein_coding	start/stop	-	5	181	0	0	0	153.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000162297	ENSMUSP00000125705	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000213636	ENSMUSP00000150899	TRANSLATION	protein_coding	stop	-	5	139	0	0	0	187.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000162655	ENSMUSP00000125621	TRANSLATION	protein_coding	-	-	5	538	0	0	6.3	364.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032534	Cep63	ENSMUST00000160512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032534	Cep63	ENSMUST00000162960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032534	Cep63	ENSMUST00000191074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032534	Cep63	ENSMUST00000159100	ENSMUSP00000124836	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000161645	ENSMUSP00000123954	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	100.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032534	Cep63	ENSMUST00000216281	ENSMUSP00000149157	TRANSLATION	protein_coding	-	-	1	596	0	0	0.5	364.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032041	Tirap	ENSMUST00000176685	ENSMUSP00000135876	TRANSLATION	protein_coding	-	CCDS40575.2	1	249	0	2.35	1.5	45.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032041	Tirap	ENSMUST00000176021	ENSMUSP00000135738	TRANSLATION	protein_coding	stop	-	3	219	0	1.6	0	43.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032041	Tirap	ENSMUST00000177052	ENSMUSP00000135429	TRANSLATION	protein_coding	stop	-	2	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032041	Tirap	ENSMUST00000176611	ENSMUSP00000134984	TRANSLATION	protein_coding	stop	-	2	120	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032041	Tirap	ENSMUST00000176531	ENSMUSP00000135224	TRANSLATION	protein_coding	-	CCDS40575.2	1	249	0	2.35	1.5	45.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032041	Tirap	ENSMUST00000177129	ENSMUSP00000135462	TRANSLATION	protein_coding	-	CCDS40575.2	1	249	0	2.35	1.5	45.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032041	Tirap	ENSMUST00000175765	ENSMUSP00000135435	TRANSLATION	protein_coding	-	CCDS40575.2	1	249	0	2.35	1.5	45.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019066	Rab3d	ENSMUST00000115351	ENSMUSP00000111008	TRANSLATION	protein_coding	-	CCDS22912.1	1	219	20	4.33	6.3	204	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019066	Rab3d	ENSMUST00000122211	ENSMUSP00000113322	TRANSLATION	protein_coding	-	CCDS22912.1	1	219	20	4.33	6.3	204	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019066	Rab3d	ENSMUST00000119055	ENSMUSP00000114106	TRANSLATION	protein_coding	-	-	3	136	13	2.63	0	129.2	0	-4,-5	-	-	5.442	MINOR
ENSMUSG00000019066	Rab3d	ENSMUST00000128442	ENSMUSP00000120067	TRANSLATION	protein_coding	stop	-	5	106	13	2	0	111.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019066	Rab3d	ENSMUST00000154019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053310	Nrgn	ENSMUST00000065668	ENSMUSP00000070113	TRANSLATION	protein_coding	-	CCDS40585.1	1	78	0	0.6	2.7	25.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053310	Nrgn	ENSMUST00000182070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050912	Tmem123	ENSMUST00000136904	ENSMUSP00000117742	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050912	Tmem123	ENSMUST00000154371	ENSMUSP00000120727	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000050912	Tmem123	ENSMUST00000052865	ENSMUSP00000051966	TRANSLATION	protein_coding	-	CCDS22810.1	1	195	0	0	0.5	42.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000049734	Trex1	ENSMUST00000112053	ENSMUSP00000107684	TRANSLATION	protein_coding	-	CCDS23544.1	1	314	11	1	5.1	0	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049734	Trex1	ENSMUST00000061973	ENSMUSP00000050971	TRANSLATION	protein_coding	-	CCDS23544.1	1	314	11	1	5.1	0	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025892	Gria4	ENSMUST00000212533	ENSMUSP00000148533	TRANSLATION	protein_coding	-	CCDS52715.1	1	902	0	14.5	13.3	568.4	3	2,-4	-	-	15.432	ALTERNATIVE:1
ENSMUSG00000025892	Gria4	ENSMUST00000027020	ENSMUSP00000027020	TRANSLATION	protein_coding	-	CCDS52715.1	5	902	0	14.5	13.3	568.4	3	2,-4	-	-	15.432	ALTERNATIVE:1
ENSMUSG00000025892	Gria4	ENSMUST00000163309	ENSMUSP00000129316	TRANSLATION	protein_coding	-	CCDS52716.1	1	433	0	8.5	14.8	219.1	0	2,-4	-	-	4	MINOR
ENSMUSG00000025892	Gria4	ENSMUST00000063508	ENSMUSP00000066980	TRANSLATION	protein_coding	-	CCDS22797.1	1	902	0	14.5	13.3	570.6	3	2,-4	-	-	15.564	PRINCIPAL:3
ENSMUSG00000032479	Map4	ENSMUST00000035055	ENSMUSP00000035055	TRANSLATION	protein_coding	-	CCDS57704.1	1	1125	0	2.83	0.5	207.3	0	-4,-5	-	-	10.398	PRINCIPAL:3
ENSMUSG00000032479	Map4	ENSMUST00000196729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032479	Map4	ENSMUST00000163190	ENSMUSP00000143171	TRANSLATION	protein_coding	start/stop	-	5	1441	0	1	0	58.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000199985	ENSMUSP00000142640	TRANSLATION	protein_coding	start	-	3	81	0	0.8	0	43	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000169851	ENSMUSP00000131660	TRANSLATION	protein_coding	-	CCDS57703.1	1	99	0	0	3.9	0	0	-4,-5	-	-	1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000199498	ENSMUSP00000142439	TRANSLATION	protein_coding	-	CCDS81083.1	1	902	0	1.83	0.5	149.2	0	-4,-5	-	-	4.914	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000197289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032479	Map4	ENSMUST00000165876	ENSMUSP00000132662	TRANSLATION	protein_coding	-	-	5	1124	0	2.83	0.5	207.3	0	-4,-5	-	-	10.398	ALTERNATIVE:2
ENSMUSG00000032479	Map4	ENSMUST00000198185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032479	Map4	ENSMUST00000163979	ENSMUSP00000129362	TRANSLATION	protein_coding	-	-	1	414	0	2.83	0	207.3	0	-4,-2	-	-	10.398	ALTERNATIVE:2
ENSMUSG00000032479	Map4	ENSMUST00000164930	ENSMUSP00000131285	TRANSLATION	protein_coding	-	CCDS81082.1	1	933	0	2.83	0.5	207.3	0	-4,-5	-	-	10.398	ALTERNATIVE:2
ENSMUSG00000032479	Map4	ENSMUST00000200480	ENSMUSP00000142501	TRANSLATION	protein_coding	start	-	3	116	0	1.63	0	78.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000198511	ENSMUSP00000142558	TRANSLATION	protein_coding	start	-	2	220	0	2.83	0	207.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000199548	ENSMUSP00000143408	TRANSLATION	protein_coding	start	-	2	290	0	2.83	0	207.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000196763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032479	Map4	ENSMUST00000199461	ENSMUSP00000143296	TRANSLATION	protein_coding	start	-	5	276	0	1.83	0	149.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032479	Map4	ENSMUST00000199161	ENSMUSP00000143205	TRANSLATION	protein_coding	start	-	3	207	0	3.63	0	207.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000100838	Gm29094	ENSMUST00000138109	ENSMUSP00000119881	TRANSLATION	protein_coding,RT	start/stop	-	4	221	0	2	0	147.3	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000042106	Inka1	ENSMUST00000175914	ENSMUSP00000134980	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042106	Inka1	ENSMUST00000048568	ENSMUSP00000040433	TRANSLATION	protein_coding	-	CCDS52919.1	1	282	0	0.8	2.7	93.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091215	Pate1	ENSMUST00000170021	ENSMUSP00000130484	TRANSLATION	protein_coding	-	CCDS57669.1	5	125	0	0	1.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000091215	Pate1	ENSMUST00000183567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090470	Prr23a3	ENSMUST00000167951	ENSMUSP00000130716	TRANSLATION	protein_coding	-	CCDS52896.1	-	254	0	0	0.5	308.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031927	1700012B09Rik	ENSMUST00000191167	ENSMUSP00000140386	TRANSLATION	nonsense_mediated_decay	start	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031927	1700012B09Rik	ENSMUST00000191047	ENSMUSP00000140908	TRANSLATION	protein_coding	-	-	3	132	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031927	1700012B09Rik	ENSMUST00000188350	ENSMUSP00000139796	TRANSLATION	nonsense_mediated_decay	-	-	1	121	0	0	2.7	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031927	1700012B09Rik	ENSMUST00000186706	ENSMUSP00000140756	TRANSLATION	nonsense_mediated_decay	start	-	5	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031927	1700012B09Rik	ENSMUST00000060330	ENSMUSP00000049826	TRANSLATION	protein_coding	-	CCDS40536.1	1	121	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000041012	Cmtm8	ENSMUST00000047013	ENSMUSP00000043706	TRANSLATION	protein_coding	-	CCDS23597.1	1	173	0	0	8.8	72.4	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000041012	Cmtm8	ENSMUST00000213929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041012	Cmtm8	ENSMUST00000213264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094254	Olfr969	ENSMUST00000074566	ENSMUSP00000074151	TRANSLATION	protein_coding	-	CCDS23061.1	-	311	0	0.36	4	170.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000094254	Olfr969	ENSMUST00000213266	ENSMUSP00000149551	TRANSLATION	protein_coding	-	CCDS23061.1	2	311	0	0.36	4	170.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000095654	Plscr5	ENSMUST00000179751	ENSMUSP00000136181	TRANSLATION	protein_coding	-	CCDS57688.1	5	274	0	0	1.5	257	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032604	Qars	ENSMUST00000207180	ENSMUSP00000147212	TRANSLATION	nonsense_mediated_decay	start	-	5	134	0	3.91	0	85.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000141903	ENSMUSP00000121146	TRANSLATION	protein_coding	start/stop	-	5	154	2	4.08	0	171.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000154324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000192627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032604	Qars	ENSMUST00000137980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000154311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000194045	ENSMUSP00000142223	TRANSLATION	nonsense_mediated_decay	start	-	3	152	0	4.528	0	95.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000136293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000192065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000141780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000131005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000208962	ENSMUSP00000146836	TRANSLATION	nonsense_mediated_decay	start	-	5	79	0	2.08	0	45	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000134939	ENSMUSP00000122918	TRANSLATION	protein_coding	-	-	5	751	3	22.05	1.2	753.5	0	-4,-5	-	-	9.232	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000208102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032604	Qars	ENSMUST00000137655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000192659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000208506	ENSMUSP00000146888	TRANSLATION	nonsense_mediated_decay	start	-	5	160	0	4.74	0	114.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000208581	ENSMUSP00000146436	TRANSLATION	protein_coding	stop	-	5	173	0	4.943	0	178.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000208074	ENSMUSP00000147017	TRANSLATION	nonsense_mediated_decay	start	-	5	117	1	3.674	0	152.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207862	ENSMUSP00000147248	TRANSLATION	protein_coding	stop	-	5	182	0	5.24	0	189.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207713	ENSMUSP00000146346	TRANSLATION	protein_coding	start/stop	-	5	246	0	7.834	0	243.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000208177	ENSMUSP00000146774	TRANSLATION	protein_coding	start	-	5	153	0	4.41	0	86.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000208214	ENSMUSP00000147211	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	2.25	0	46.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000208069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032604	Qars	ENSMUST00000207790	ENSMUSP00000146920	TRANSLATION	nonsense_mediated_decay	start	-	5	121	0	3.278	0	76.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207734	ENSMUSP00000147195	TRANSLATION	nonsense_mediated_decay	start	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207947	ENSMUSP00000146941	TRANSLATION	nonsense_mediated_decay	-	-	5	273	0	7.24	0	237.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000141201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000208162	ENSMUSP00000146356	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000207062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032604	Qars	ENSMUST00000207810	ENSMUSP00000146612	TRANSLATION	protein_coding	stop	-	5	341	0	10.48	0	370.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032604	Qars	ENSMUST00000144253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032604	Qars	ENSMUST00000006838	ENSMUSP00000006838	TRANSLATION	protein_coding	-	CCDS23530.1	1	775	3	23.05	6.3	817.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000085576	Dpy19l2	ENSMUST00000133010	ENSMUSP00000132092	TRANSLATION	protein_coding	-	CCDS52743.1	1	773	0	0	1.5	762.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000070319	Eif3g	ENSMUST00000004206	ENSMUSP00000004206	TRANSLATION	protein_coding	-	CCDS40547.1	1	320	4	5.115	10.8	211.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000070319	Eif3g	ENSMUST00000213454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070319	Eif3g	ENSMUST00000216133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070319	Eif3g	ENSMUST00000213882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025232	Hexa	ENSMUST00000026262	ENSMUSP00000026262	TRANSLATION	protein_coding	-	CCDS23250.1	1	528	2	12.35	3.9	368.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032567	Aste1	ENSMUST00000216711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032567	Aste1	ENSMUST00000035181	ENSMUSP00000035181	TRANSLATION	protein_coding	-	CCDS23465.1	1	672	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000032567	Aste1	ENSMUST00000189758	ENSMUSP00000139854	TRANSLATION	nonsense_mediated_decay	start	-	5	103	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032567	Aste1	ENSMUST00000167674	ENSMUSP00000131164	TRANSLATION	protein_coding	-	CCDS52905.1	1	159	0	0	1.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000032567	Aste1	ENSMUST00000176940	ENSMUSP00000135856	TRANSLATION	protein_coding	-	-	5	323	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000032567	Aste1	ENSMUST00000137208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032567	Aste1	ENSMUST00000190934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032567	Aste1	ENSMUST00000123807	ENSMUSP00000149596	TRANSLATION	protein_coding	-	-	2	611	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000032567	Aste1	ENSMUST00000177402	ENSMUSP00000135318	TRANSLATION	nonsense_mediated_decay	start	-	5	103	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032567	Aste1	ENSMUST00000176597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032567	Aste1	ENSMUST00000176350	ENSMUSP00000139429	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000130602	ENSMUSP00000115845	TRANSLATION	protein_coding	start	-	5	587	0	0	0	316.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000138224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032531	Amotl2	ENSMUST00000190047	ENSMUSP00000140688	TRANSLATION	protein_coding	stop	-	5	113	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000145937	ENSMUSP00000114950	TRANSLATION	protein_coding	stop	-	2	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000035121	ENSMUSP00000035121	TRANSLATION	protein_coding	-	CCDS40745.1	1	772	0	0	1.5	316.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032531	Amotl2	ENSMUST00000153965	ENSMUSP00000121113	TRANSLATION	protein_coding	-	-	1	805	0	0	0	316.3	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000032531	Amotl2	ENSMUST00000142011	ENSMUSP00000120378	TRANSLATION	nonsense_mediated_decay	-	-	1	718	0	0	0	316.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000156485	ENSMUSP00000116554	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000136934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032531	Amotl2	ENSMUST00000145913	ENSMUSP00000118126	TRANSLATION	protein_coding	stop	-	2	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000155143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032531	Amotl2	ENSMUST00000153911	ENSMUSP00000119903	TRANSLATION	protein_coding	stop	-	2	220	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032531	Amotl2	ENSMUST00000126616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032531	Amotl2	ENSMUST00000134483	ENSMUSP00000118176	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034533	Scn10a	ENSMUST00000213392	ENSMUSP00000148987	TRANSLATION	protein_coding	-	-	1	1957	0	7.42	1.5	1032.8	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034533	Scn10a	ENSMUST00000084787	ENSMUSP00000081845	TRANSLATION	protein_coding	-	CCDS57716.1	5	1958	0	7.42	1.5	1032	7	-4,-6	-	-	11.952	PRINCIPAL:2
ENSMUSG00000034533	Scn10a	ENSMUST00000216583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034533	Scn10a	ENSMUST00000213401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034533	Scn10a	ENSMUST00000214408	ENSMUSP00000150830	TRANSLATION	protein_coding	-	CCDS57716.1	1	1958	0	7.42	1.5	1032	7	-4,-6	-	-	11.952	PRINCIPAL:2
ENSMUSG00000003299	Mrpl4	ENSMUST00000216325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003299	Mrpl4	ENSMUST00000216466	ENSMUSP00000151075	TRANSLATION	nonsense_mediated_decay	start	-	1	33	0	0.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003299	Mrpl4	ENSMUST00000214124	ENSMUSP00000150112	TRANSLATION	protein_coding	stop	-	5	264	0	7.02	0	96.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000003299	Mrpl4	ENSMUST00000003386	ENSMUSP00000003386	TRANSLATION	protein_coding	-	CCDS40548.1	1	294	0	8.57	3.9	186	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000003299	Mrpl4	ENSMUST00000216818	ENSMUSP00000149690	TRANSLATION	protein_coding	start/stop	-	3	219	0	6.1996	0	140.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000003299	Mrpl4	ENSMUST00000216824	ENSMUSP00000150591	TRANSLATION	nonsense_mediated_decay	-	-	2	160	0	4.41	0	87.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000003299	Mrpl4	ENSMUST00000216175	ENSMUSP00000150420	TRANSLATION	nonsense_mediated_decay	-	-	5	172	0	4.61	0	90.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000003299	Mrpl4	ENSMUST00000213977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000142540	ENSMUSP00000116504	TRANSLATION	protein_coding	stop	-	3	38	0	1	0	27.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000123530	ENSMUSP00000115867	TRANSLATION	protein_coding	-	-	5	622	26	13.99	0	667.3	0	4,-1	-	-	10.038	MINOR
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000151073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000150524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000035163	ENSMUSP00000035163	TRANSLATION	protein_coding	-	CCDS23452.1	1	700	27	15.99	0.5	722.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033688	1300017J02Rik	ENSMUST00000154357	ENSMUSP00000123519	TRANSLATION	protein_coding	start/stop	-	3	242	17	5.08	0	192.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070287	Slc35g2	ENSMUST00000189478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070287	Slc35g2	ENSMUST00000093792	ENSMUSP00000091308	TRANSLATION	protein_coding	-	CCDS52898.1	2	412	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095194	Olfr936	ENSMUST00000178303	ENSMUSP00000137209	TRANSLATION	protein_coding	-	CCDS57672.1	-	267	0	0.28	0.5	165.2	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000095194	Olfr936	ENSMUST00000216912	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000095322	Olfr957	ENSMUST00000051653	ENSMUSP00000054536	TRANSLATION	protein_coding	-	CCDS23049.1	-	311	0	0	6.4	170.3	6	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000095322	Olfr957	ENSMUST00000216177	ENSMUSP00000149559	TRANSLATION	protein_coding	-	CCDS23049.1	3	311	0	0	6.4	170.3	6	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000032580	Rbm5	ENSMUST00000035199	ENSMUSP00000035199	TRANSLATION	protein_coding	-	-	5	814	8	9.485	8.8	139	0	-4,-6	-	-	20.502	ALTERNATIVE:1
ENSMUSG00000032580	Rbm5	ENSMUST00000182421	ENSMUSP00000138778	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000183248	ENSMUSP00000138294	TRANSLATION	protein_coding	stop	-	5	115	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000182422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182304	ENSMUSP00000138380	TRANSLATION	protein_coding	stop	-	3	251	4	4.555	0	74.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000182371	ENSMUSP00000138119	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	0.925	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000182792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182022	ENSMUSP00000138390	TRANSLATION	protein_coding	stop	-	5	137	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000183307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182026	ENSMUSP00000138526	TRANSLATION	protein_coding	start	-	2	154	4	0	0	60.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000194682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000194801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000192130	ENSMUSP00000142194	TRANSLATION	nonsense_mediated_decay	-	-	3	150	0	0.925	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000181993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000182215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032580	Rbm5	ENSMUST00000194400	ENSMUSP00000142324	TRANSLATION	protein_coding	start	-	3	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032580	Rbm5	ENSMUST00000182659	ENSMUSP00000138379	TRANSLATION	protein_coding	-	CCDS23506.1	1	815	8	9.735	8.8	139	0	-4,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000032580	Rbm5	ENSMUST00000193342	ENSMUSP00000141829	TRANSLATION	nonsense_mediated_decay	start	-	3	175	0	2.675	0	35.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032244	Fem1b	ENSMUST00000034775	ENSMUSP00000034775	TRANSLATION	protein_coding	-	CCDS23266.1	1	627	0	0.56	15	146.3	0	-3,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050702	4930563M21Rik	ENSMUST00000060468	ENSMUSP00000051794	TRANSLATION	protein_coding	-	CCDS52803.1	1	197	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000050702	4930563M21Rik	ENSMUST00000217105	ENSMUSP00000150879	TRANSLATION	protein_coding	start	-	5	578	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043331	Olfr975	ENSMUST00000054067	ENSMUSP00000059776	TRANSLATION	protein_coding	-	CCDS23067.1	-	310	0	0.36	7.6	173.6	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043331	Olfr975	ENSMUST00000216647	ENSMUSP00000150664	TRANSLATION	protein_coding	-	CCDS23067.1	5	310	0	0.36	7.6	173.6	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032094	Cd3d	ENSMUST00000034602	ENSMUSP00000034602	TRANSLATION	protein_coding	-	CCDS23124.1	1	173	0	1.4	1.5	110.3	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032094	Cd3d	ENSMUST00000214800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032094	Cd3d	ENSMUST00000214715	ENSMUSP00000150999	TRANSLATION	protein_coding	start	-	2	38	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000001942	Siae	ENSMUST00000002007	ENSMUSP00000002007	TRANSLATION	protein_coding	-	-	1	469	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000001942	Siae	ENSMUST00000213964	ENSMUSP00000149029	TRANSLATION	protein_coding	start	-	3	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001942	Siae	ENSMUST00000215474	ENSMUSP00000149505	TRANSLATION	protein_coding	-	CCDS22983.1	1	541	0	0	1.5	0	0	4,-3	-	-	0	PRINCIPAL:2
ENSMUSG00000001942	Siae	ENSMUST00000213126	ENSMUSP00000150641	TRANSLATION	protein_coding	-	-	5	506	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000001942	Siae	ENSMUST00000215678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001942	Siae	ENSMUST00000217567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001942	Siae	ENSMUST00000215829	ENSMUSP00000149220	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032512	Wdr48	ENSMUST00000213230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032512	Wdr48	ENSMUST00000217492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032512	Wdr48	ENSMUST00000214716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032512	Wdr48	ENSMUST00000217472	ENSMUSP00000150321	TRANSLATION	protein_coding	-	-	1	576	0	14.66	0	92.9	0	-4,-2	-	-	0.498	MINOR
ENSMUSG00000032512	Wdr48	ENSMUST00000216349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032512	Wdr48	ENSMUST00000217555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032512	Wdr48	ENSMUST00000217429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032512	Wdr48	ENSMUST00000215307	ENSMUSP00000149478	TRANSLATION	protein_coding	-	-	1	662	0	16.91	0	257.9	0	-4,-2	-	-	10.998	MINOR
ENSMUSG00000032512	Wdr48	ENSMUST00000215167	ENSMUSP00000149793	TRANSLATION	protein_coding	start	-	5	205	0	4.25	0	39.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032512	Wdr48	ENSMUST00000036561	ENSMUSP00000042509	TRANSLATION	protein_coding	-	CCDS23618.1	1	676	0	17.41	16.3	257.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000032370	Lactb	ENSMUST00000215172	ENSMUSP00000151155	TRANSLATION	protein_coding	-	-	1	356	2	1.6	1.5	107.2	0	-4,-1	-	-	7.304	MINOR
ENSMUSG00000032370	Lactb	ENSMUST00000034929	ENSMUSP00000034929	TRANSLATION	protein_coding	-	CCDS40674.1	1	551	4	2.72	1.5	177.6	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000044244	Il20rb	ENSMUST00000136856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044244	Il20rb	ENSMUST00000098458	ENSMUSP00000096057	TRANSLATION	protein_coding	-	CCDS23438.2	5	308	0	4.15	1.5	111.5	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044244	Il20rb	ENSMUST00000136606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044244	Il20rb	ENSMUST00000122880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044244	Il20rb	ENSMUST00000125259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044244	Il20rb	ENSMUST00000152756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032307	Ube2q2	ENSMUST00000148468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032307	Ube2q2	ENSMUST00000122441	ENSMUSP00000112745	TRANSLATION	protein_coding	-	CCDS85678.1	1	255	0	5.566	0.5	36.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000032307	Ube2q2	ENSMUST00000121677	ENSMUSP00000113336	TRANSLATION	protein_coding	-	CCDS85677.1	5	343	0	5.566	5.1	36.8	0	-4,-5	-	-	14.016	ALTERNATIVE:1
ENSMUSG00000032307	Ube2q2	ENSMUST00000059555	ENSMUSP00000059798	TRANSLATION	protein_coding	-	CCDS23201.1	1	378	0	5.566	7.1	36.8	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000046402	Rbp1	ENSMUST00000052068	ENSMUSP00000059749	TRANSLATION	protein_coding	-	CCDS23424.1	1	135	19	3.25	21.5	67.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000049314	Fbxw13	ENSMUST00000199118	ENSMUSP00000143174	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	0	0	46.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049314	Fbxw13	ENSMUST00000199102	ENSMUSP00000142352	TRANSLATION	protein_coding	stop	-	3	264	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000049314	Fbxw13	ENSMUST00000061456	ENSMUSP00000053786	TRANSLATION	protein_coding	-	CCDS23548.1	1	466	0	0	0.5	49.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046460	Sh2d7	ENSMUST00000060242	ENSMUSP00000053690	TRANSLATION	protein_coding	-	CCDS23190.1	1	284	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000046460	Sh2d7	ENSMUST00000118413	ENSMUSP00000113298	TRANSLATION	protein_coding	-	-	1	458	0	2.42	1.5	56.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046460	Sh2d7	ENSMUST00000238614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032329	Hmg20a	ENSMUST00000213242	ENSMUSP00000149934	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000032329	Hmg20a	ENSMUST00000215269	ENSMUSP00000149698	TRANSLATION	protein_coding	-	CCDS23208.1	1	346	0	2	10.8	68.6	0	-3,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000032329	Hmg20a	ENSMUST00000217518	ENSMUSP00000149359	TRANSLATION	protein_coding	-	-	1	379	0	2	0.5	68.6	0	-3,-4	-	-	12	MINOR
ENSMUSG00000032329	Hmg20a	ENSMUST00000214869	ENSMUSP00000150382	TRANSLATION	protein_coding	-	-	1	101	0	0	0	0	0	-3,-4	-	-	0	MINOR
ENSMUSG00000032329	Hmg20a	ENSMUST00000214771	ENSMUSP00000149375	TRANSLATION	protein_coding	-	-	1	180	0	1	0	44.6	0	-3,-4	-	-	6.9	MINOR
ENSMUSG00000032329	Hmg20a	ENSMUST00000034879	ENSMUSP00000034879	TRANSLATION	protein_coding	-	CCDS23208.1	1	346	0	2	10.8	68.6	0	-3,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000042195	Slc35f2	ENSMUST00000048670	ENSMUSP00000046528	TRANSLATION	protein_coding	-	CCDS40639.1	1	375	0	0	1.5	482.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000042195	Slc35f2	ENSMUST00000216515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000111448	Olfr912	ENSMUST00000217160	ENSMUSP00000150014	TRANSLATION	protein_coding	-	CCDS23017.1	2	310	0	0.2	5.1	169.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032011	Thy1	ENSMUST00000114840	ENSMUSP00000110489	TRANSLATION	protein_coding	-	CCDS23093.1	2	162	0	0	1.7	38.3	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000032011	Thy1	ENSMUST00000213733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032011	Thy1	ENSMUST00000215156	ENSMUSP00000150177	TRANSLATION	protein_coding	-	-	5	37	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000032011	Thy1	ENSMUST00000215809	ENSMUSP00000150960	TRANSLATION	protein_coding	stop	-	2	125	0	0	0	38.3	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032011	Thy1	ENSMUST00000214627	ENSMUSP00000149610	TRANSLATION	protein_coding	-	-	3	40	0	0	0	0	0	-1,2	-	-	0	MINOR
ENSMUSG00000032011	Thy1	ENSMUST00000213632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047898	Ccr4	ENSMUST00000215959	ENSMUSP00000150441	TRANSLATION	protein_coding	stop	-	3	32	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047898	Ccr4	ENSMUST00000215425	ENSMUSP00000150002	TRANSLATION	protein_coding	-	CCDS23594.1	1	360	0	1.2	6.3	163.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000047898	Ccr4	ENSMUST00000054414	ENSMUSP00000062677	TRANSLATION	protein_coding	-	CCDS23594.1	1	360	0	1.2	6.3	163.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032477	Cdc25a	ENSMUST00000197945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032477	Cdc25a	ENSMUST00000199353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032477	Cdc25a	ENSMUST00000198308	ENSMUSP00000142958	TRANSLATION	protein_coding	-	-	1	411	0	4.75	0	269.4	0	-4,-6	-	-	9	MINOR
ENSMUSG00000032477	Cdc25a	ENSMUST00000094324	ENSMUSP00000091882	TRANSLATION	protein_coding	-	CCDS23559.1	1	514	0	6.25	0.5	269.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032477	Cdc25a	ENSMUST00000198219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032477	Cdc25a	ENSMUST00000199787	ENSMUSP00000142752	TRANSLATION	protein_coding	start	-	5	235	0	3.75	0	114.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032477	Cdc25a	ENSMUST00000198848	ENSMUSP00000142819	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032292	Nr2e3	ENSMUST00000128060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032292	Nr2e3	ENSMUST00000138888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032292	Nr2e3	ENSMUST00000034831	ENSMUSP00000034831	TRANSLATION	protein_coding	-	CCDS23255.1	1	395	8	6.16	0.5	202.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032292	Nr2e3	ENSMUST00000156845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032292	Nr2e3	ENSMUST00000128108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032292	Nr2e3	ENSMUST00000130831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032292	Nr2e3	ENSMUST00000143377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032292	Nr2e3	ENSMUST00000147892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032292	Nr2e3	ENSMUST00000144391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004771	Rab11a	ENSMUST00000167569	ENSMUSP00000125755	TRANSLATION	protein_coding	-	-	3	86	3	2.58	0	21.7	0	-4,-5	-	-	0.498	MINOR
ENSMUSG00000004771	Rab11a	ENSMUST00000004892	ENSMUSP00000004892	TRANSLATION	protein_coding	stop	-	5	155	20	3.58	0	178.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004771	Rab11a	ENSMUST00000168366	ENSMUSP00000128150	TRANSLATION	protein_coding	start	-	3	87	7	1.6	0	56.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004771	Rab11a	ENSMUST00000172444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004771	Rab11a	ENSMUST00000166857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004771	Rab11a	ENSMUST00000171100	ENSMUSP00000127968	TRANSLATION	protein_coding	stop	-	2	80	7	2.33	0	54.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004771	Rab11a	ENSMUST00000169058	ENSMUSP00000129729	TRANSLATION	protein_coding	-	-	5	153	20	3.25	1.2	181.7	0	-4,-5	-	-	10.044	MINOR
ENSMUSG00000004771	Rab11a	ENSMUST00000172298	ENSMUSP00000129163	TRANSLATION	protein_coding	-	CCDS23282.1	1	216	23	5.33	17.5	212.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004771	Rab11a	ENSMUST00000165083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032601	Prkar2a	ENSMUST00000192344	ENSMUSP00000141517	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032601	Prkar2a	ENSMUST00000195263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032601	Prkar2a	ENSMUST00000035220	ENSMUSP00000035220	TRANSLATION	protein_coding	-	CCDS23536.1	1	402	27	9.24	1.5	195.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032601	Prkar2a	ENSMUST00000195405	ENSMUSP00000141869	TRANSLATION	protein_coding	-	-	5	380	26	8.41	0	161	0	-4,-6	-	-	13.626	MINOR
ENSMUSG00000032601	Prkar2a	ENSMUST00000192068	ENSMUSP00000142251	TRANSLATION	protein_coding	start/stop	-	3	200	16	5.57	0	63.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032601	Prkar2a	ENSMUST00000193215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086596	Susd5	ENSMUST00000135338	ENSMUSP00000128826	TRANSLATION	protein_coding	-	CCDS52949.1	1	619	2	0	1.5	41.5	0	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000062103	Olfr924	ENSMUST00000072977	ENSMUSP00000072744	TRANSLATION	protein_coding	-	CCDS23029.1	-	308	0	0.2	3.9	182.1	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000062103	Olfr924	ENSMUST00000217350	ENSMUSP00000149849	TRANSLATION	protein_coding	-	CCDS23029.1	5	308	0	0.2	3.9	182.1	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000032443	Zcwpw2	ENSMUST00000217232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032443	Zcwpw2	ENSMUST00000187803	ENSMUSP00000159064	TRANSLATION	protein_coding	-	-	-	125	4	1.198	0	55.7	0	-4,-5	-	-	13.39	MINOR
ENSMUSG00000032443	Zcwpw2	ENSMUST00000187329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032443	Zcwpw2	ENSMUST00000191100	ENSMUSP00000159110	TRANSLATION	nonsense_mediated_decay	-	-	1	125	4	1.198	0	55.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032443	Zcwpw2	ENSMUST00000111769	ENSMUSP00000159157	TRANSLATION	nonsense_mediated_decay	start	-	1	216	4	1	0	98.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032443	Zcwpw2	ENSMUST00000238919	ENSMUSP00000158867	TRANSLATION	protein_coding	-	-	-	331	4	1.198	0	98.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035919	Bbs9	ENSMUST00000142313	ENSMUSP00000122325	TRANSLATION	protein_coding	stop	-	3	132	0	3.5	0	164.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035919	Bbs9	ENSMUST00000128812	ENSMUSP00000117700	TRANSLATION	protein_coding	stop	-	5	147	0	4	0	194.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035919	Bbs9	ENSMUST00000147405	ENSMUSP00000120927	TRANSLATION	protein_coding	-	-	5	885	0	9.05	7.5	1048.5	0	-4,-5	-	-	14.67	ALTERNATIVE:1
ENSMUSG00000035919	Bbs9	ENSMUST00000150395	ENSMUSP00000116629	TRANSLATION	protein_coding	-	CCDS22928.1	1	880	0	9.05	5.1	1054	0	-4,-5	-	-	13.893	PRINCIPAL:2
ENSMUSG00000035919	Bbs9	ENSMUST00000127296	ENSMUSP00000121992	TRANSLATION	nonsense_mediated_decay	start	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035919	Bbs9	ENSMUST00000130479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035919	Bbs9	ENSMUST00000039798	ENSMUSP00000043042	TRANSLATION	protein_coding	-	CCDS22928.1	1	880	0	9.05	5.1	1054	0	-4,-5	-	-	13.893	PRINCIPAL:2
ENSMUSG00000035919	Bbs9	ENSMUST00000152719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035919	Bbs9	ENSMUST00000124076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035919	Bbs9	ENSMUST00000137547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035919	Bbs9	ENSMUST00000147712	ENSMUSP00000122058	TRANSLATION	protein_coding	-	CCDS22928.1	1	880	0	9.05	5.1	1054	0	-4,-5	-	-	13.893	PRINCIPAL:2
ENSMUSG00000035919	Bbs9	ENSMUST00000136084	ENSMUSP00000123160	TRANSLATION	protein_coding	start	-	5	163	0	0	0	141.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032462	Pik3cb	ENSMUST00000124723	ENSMUSP00000121466	TRANSLATION	protein_coding	stop	-	5	68	0	1.5	0	36.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032462	Pik3cb	ENSMUST00000136965	ENSMUSP00000138346	TRANSLATION	nonsense_mediated_decay	-	-	1	530	0	9.75	0	288.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032462	Pik3cb	ENSMUST00000035037	ENSMUSP00000035037	TRANSLATION	protein_coding	-	CCDS23432.1	1	1064	20	21.83	0.5	712.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000066463	Omt2a	ENSMUST00000113376	ENSMUSP00000109003	TRANSLATION	protein_coding	-	CCDS52868.1	3	90	0	0	0.5	0	1	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000066463	Omt2a	ENSMUST00000166056	ENSMUSP00000126342	TRANSLATION	protein_coding	-	CCDS52867.1	1	100	0	0	0.5	0	1	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000066463	Omt2a	ENSMUST00000173321	ENSMUSP00000133954	TRANSLATION	nonsense_mediated_decay	start	-	5	25	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000066463	Omt2a	ENSMUST00000173608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066463	Omt2a	ENSMUST00000085308	ENSMUSP00000082416	TRANSLATION	protein_coding	stop	-	5	104	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031993	Snx19	ENSMUST00000216545	ENSMUSP00000149310	TRANSLATION	protein_coding	start	-	3	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031993	Snx19	ENSMUST00000164099	ENSMUSP00000131895	TRANSLATION	protein_coding	-	CCDS22944.1	1	997	0	3	0.5	270.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031993	Snx19	ENSMUST00000216552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032199	Polr2m	ENSMUST00000233263	ENSMUSP00000156800	TRANSLATION	protein_coding	-	-	-	84	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032199	Polr2m	ENSMUST00000163972	ENSMUSP00000132335	TRANSLATION	protein_coding	-	CCDS52853.1	1	262	0	0	0.5	114.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032199	Polr2m	ENSMUST00000169804	ENSMUSP00000126403	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032199	Polr2m	ENSMUST00000034720	ENSMUSP00000034720	TRANSLATION	protein_coding	-	CCDS23326.1	1	366	0	0	1.5	246.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074500	Zfp558	ENSMUST00000034647	ENSMUSP00000132305	TRANSLATION	protein_coding	-	CCDS52729.1	5	407	36	1.8	0.5	277.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000074500	Zfp558	ENSMUST00000159596	ENSMUSP00000126946	TRANSLATION	nonsense_mediated_decay	-	-	2	107	0	1	0	81	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074500	Zfp558	ENSMUST00000034646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074500	Zfp558	ENSMUST00000162441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035769	Xylb	ENSMUST00000215305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035769	Xylb	ENSMUST00000215822	ENSMUSP00000150659	TRANSLATION	nonsense_mediated_decay	-	-	1	65	4	1.75	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035769	Xylb	ENSMUST00000039610	ENSMUSP00000047254	TRANSLATION	protein_coding	-	CCDS23614.1	1	551	16	15.75	0.5	118.4	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000035769	Xylb	ENSMUST00000213383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035769	Xylb	ENSMUST00000216838	ENSMUSP00000151179	TRANSLATION	nonsense_mediated_decay	-	-	1	65	4	1.75	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032291	Crabp1	ENSMUST00000034830	ENSMUSP00000034830	TRANSLATION	protein_coding	-	CCDS23195.1	1	137	20	3.25	19.5	83.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000058628	Olfr875	ENSMUST00000080634	ENSMUSP00000079467	TRANSLATION	protein_coding	-	CCDS22987.1	-	310	0	0.32	8.8	164.5	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000058628	Olfr875	ENSMUST00000215128	ENSMUSP00000150684	TRANSLATION	protein_coding	-	CCDS22987.1	5	310	0	0.32	8.8	164.5	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032478	Nme6	ENSMUST00000200005	ENSMUSP00000142609	TRANSLATION	protein_coding	stop	-	5	157	12	5.04	0	127.6	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032478	Nme6	ENSMUST00000196762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032478	Nme6	ENSMUST00000200468	ENSMUSP00000143021	TRANSLATION	protein_coding	-	CCDS23558.1	2	189	12	5.04	0.5	127.6	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032478	Nme6	ENSMUST00000199203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032478	Nme6	ENSMUST00000200345	ENSMUSP00000142392	TRANSLATION	protein_coding	stop	-	5	115	7	3.63	0	89	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032478	Nme6	ENSMUST00000200091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032478	Nme6	ENSMUST00000197627	ENSMUSP00000142778	TRANSLATION	protein_coding	-	-	3	110	6	2.4	0	53.8	0	-3,-6	-	-	4.29	MINOR
ENSMUSG00000032478	Nme6	ENSMUST00000196312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032478	Nme6	ENSMUST00000199758	ENSMUSP00000143591	TRANSLATION	nonsense_mediated_decay	-	-	5	84	2	1.8	0	35	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032478	Nme6	ENSMUST00000035053	ENSMUSP00000035053	TRANSLATION	protein_coding	-	CCDS23558.1	1	189	12	5.04	0.5	127.6	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032478	Nme6	ENSMUST00000199181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032478	Nme6	ENSMUST00000200660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032478	Nme6	ENSMUST00000196797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032478	Nme6	ENSMUST00000196425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032478	Nme6	ENSMUST00000198201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032308	Ulk3	ENSMUST00000217100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032308	Ulk3	ENSMUST00000215748	ENSMUSP00000149623	TRANSLATION	nonsense_mediated_decay	start	-	3	43	1	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032308	Ulk3	ENSMUST00000215868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032308	Ulk3	ENSMUST00000215146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032308	Ulk3	ENSMUST00000213212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032308	Ulk3	ENSMUST00000053230	ENSMUSP00000059947	TRANSLATION	protein_coding	-	CCDS52809.1	1	472	19	6.848	6.3	361.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000032308	Ulk3	ENSMUST00000213530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007892	Rplp1	ENSMUST00000008036	ENSMUSP00000008036	TRANSLATION	protein_coding	-	CCDS23260.1	1	114	0	2.5	19.5	92.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000032536	Trak1	ENSMUST00000211699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032536	Trak1	ENSMUST00000209211	ENSMUSP00000147805	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000211149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032536	Trak1	ENSMUST00000211301	ENSMUSP00000147604	TRANSLATION	nonsense_mediated_decay	-	-	1	560	0	0	0	593.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000209306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032536	Trak1	ENSMUST00000210351	ENSMUSP00000147571	TRANSLATION	protein_coding	stop	-	3	241	0	0	0	308.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000045903	ENSMUSP00000044482	TRANSLATION	protein_coding	-	CCDS40810.1	1	939	0	0	1.5	681.8	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000032536	Trak1	ENSMUST00000238988	ENSMUSP00000158925	TRANSLATION	protein_coding	-	-	-	968	0	0	0	681.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032536	Trak1	ENSMUST00000209995	ENSMUSP00000147885	TRANSLATION	protein_coding	stop	-	2	24	0	0	0	38.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000211187	ENSMUSP00000147624	TRANSLATION	protein_coding	-	-	5	731	0	0	0.5	611.3	0	-4,-5	-	-	1.77	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000209446	ENSMUSP00000148017	TRANSLATION	protein_coding	start	-	3	234	0	0	0	147	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000209390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032536	Trak1	ENSMUST00000210636	ENSMUSP00000148092	TRANSLATION	protein_coding	-	-	1	256	0	0	0	277.5	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000211439	ENSMUSP00000148026	TRANSLATION	protein_coding	-	-	1	524	0	0	0	592.3	0	-4,-5	-	-	0.63	MINOR
ENSMUSG00000032536	Trak1	ENSMUST00000210798	ENSMUSP00000147646	TRANSLATION	protein_coding	-	-	1	606	0	0	0	593.6	0	-4,-5	-	-	0.708	MINOR
ENSMUSG00000045204	Olfr835	ENSMUST00000059315	ENSMUSP00000052610	TRANSLATION	protein_coding	-	CCDS22851.1	-	311	0	0.24	1.5	160.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045204	Olfr835	ENSMUST00000213018	ENSMUSP00000148416	TRANSLATION	protein_coding	-	CCDS22851.1	5	311	0	0.24	1.5	160.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034858	Fam214a	ENSMUST00000081746	ENSMUSP00000080442	TRANSLATION	protein_coding	-	CCDS52858.1	1	1082	0	0	1.5	118.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000034858	Fam214a	ENSMUST00000215355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034858	Fam214a	ENSMUST00000214755	ENSMUSP00000150065	TRANSLATION	nonsense_mediated_decay	-	-	2	963	0	0	0	50.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034858	Fam214a	ENSMUST00000216809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034858	Fam214a	ENSMUST00000216125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034858	Fam214a	ENSMUST00000170846	ENSMUSP00000129319	TRANSLATION	protein_coding	-	CCDS52857.1	5	1075	0	0	1.5	118.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000034858	Fam214a	ENSMUST00000215370	ENSMUSP00000149021	TRANSLATION	protein_coding	-	CCDS52857.1	5	1075	0	0	1.5	118.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096472	Cdkn2d	ENSMUST00000213407	ENSMUSP00000149499	TRANSLATION	protein_coding	stop	-	2	163	0	2	7.5	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096472	Cdkn2d	ENSMUST00000215619	ENSMUSP00000150701	TRANSLATION	protein_coding	-	CCDS22901.1	1	166	0	2	8.8	38.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096472	Cdkn2d	ENSMUST00000086374	ENSMUSP00000083561	TRANSLATION	protein_coding	-	-	1	50	0	1	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000040883	Tmem205	ENSMUST00000216178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040883	Tmem205	ENSMUST00000214569	ENSMUSP00000149824	TRANSLATION	protein_coding	stop	-	3	173	0	0	0	85.6	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000040883	Tmem205	ENSMUST00000046831	ENSMUSP00000048832	TRANSLATION	protein_coding	-	CCDS22913.1	1	189	0	0	5.1	85.6	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040883	Tmem205	ENSMUST00000217263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040883	Tmem205	ENSMUST00000213698	ENSMUSP00000150045	TRANSLATION	protein_coding	-	CCDS22913.1	3	189	0	0	5.1	85.6	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040883	Tmem205	ENSMUST00000238930	ENSMUSP00000158874	TRANSLATION	protein_coding	-	CCDS22913.1	-	189	0	0	5.1	85.6	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040883	Tmem205	ENSMUST00000215650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037257	Aagab	ENSMUST00000213702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037257	Aagab	ENSMUST00000041551	ENSMUSP00000048595	TRANSLATION	protein_coding	-	CCDS23271.1	1	316	0	0	1.5	81.8	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037257	Aagab	ENSMUST00000213880	ENSMUSP00000148887	TRANSLATION	nonsense_mediated_decay	start	-	3	98	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032556	Bfsp2	ENSMUST00000124310	ENSMUSP00000116249	TRANSLATION	protein_coding	-	CCDS52903.1	1	416	0	2.55	5.1	183	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000032556	Bfsp2	ENSMUST00000136636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047220	Ccdc36	ENSMUST00000076592	ENSMUSP00000075898	TRANSLATION	protein_coding	-	CCDS57701.1	1	574	0	0	0.5	898.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000086228	Ubap1l	ENSMUST00000215152	ENSMUSP00000149471	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000086228	Ubap1l	ENSMUST00000147185	ENSMUSP00000128815	TRANSLATION	protein_coding	-	CCDS52836.1	5	384	0	1.95	0.5	0	0	-4,-5	-	-	4.776	PRINCIPAL:1
ENSMUSG00000086228	Ubap1l	ENSMUST00000217103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086228	Ubap1l	ENSMUST00000239433	ENSMUSP00000159297	TRANSLATION	protein_coding	start	-	-	243	0	2.45	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000099564	Gm28729	ENSMUST00000190704	ENSMUSP00000148097	TRANSLATION	protein_coding	-	-	5	409	0	1.44	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032024	Clmp	ENSMUST00000034522	ENSMUSP00000034522	TRANSLATION	protein_coding	-	CCDS23082.1	1	373	0	3.12	3.9	92.4	0	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000032024	Clmp	ENSMUST00000139577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032024	Clmp	ENSMUST00000141759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032024	Clmp	ENSMUST00000134153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063108	Zfp26	ENSMUST00000075263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063108	Zfp26	ENSMUST00000098970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063108	Zfp26	ENSMUST00000162438	ENSMUSP00000123960	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063108	Zfp26	ENSMUST00000160370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063108	Zfp26	ENSMUST00000159569	ENSMUSP00000124075	TRANSLATION	protein_coding	-	CCDS40543.2	1	959	88	1.2	0.5	529.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063108	Zfp26	ENSMUST00000161248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032549	Rab6b	ENSMUST00000189134	ENSMUSP00000149595	TRANSLATION	protein_coding	-	-	3	80	7	2.33	0	94.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032549	Rab6b	ENSMUST00000035155	ENSMUSP00000035155	TRANSLATION	protein_coding	-	CCDS23449.1	1	208	20	6.41	19.5	198.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000049926	Olfr921	ENSMUST00000217114	ENSMUSP00000150844	TRANSLATION	protein_coding	-	CCDS23026.1	2	313	0	0.2	5.1	163.8	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049926	Olfr921	ENSMUST00000213958	ENSMUSP00000150012	TRANSLATION	protein_coding	-	CCDS23026.1	2	313	0	0.2	5.1	163.8	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049926	Olfr921	ENSMUST00000071681	ENSMUSP00000071604	TRANSLATION	protein_coding	-	CCDS23026.1	-	313	0	0.2	5.1	163.8	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032489	Kif9	ENSMUST00000198043	ENSMUSP00000142689	TRANSLATION	protein_coding	-	-	1	573	11	9.065	0	325.7	0	-4,-7	-	-	18	MINOR
ENSMUSG00000032489	Kif9	ENSMUST00000197248	ENSMUSP00000142734	TRANSLATION	protein_coding	-	-	1	802	11	9.065	0	325.7	0	-4,-7	-	-	18	MINOR
ENSMUSG00000032489	Kif9	ENSMUST00000198858	ENSMUSP00000142888	TRANSLATION	protein_coding	stop	-	3	146	10	2.7	0	91.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032489	Kif9	ENSMUST00000084952	ENSMUSP00000082016	TRANSLATION	protein_coding	-	CCDS23568.1	1	790	11	9.065	7.5	325.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000032489	Kif9	ENSMUST00000061155	ENSMUSP00000057896	TRANSLATION	protein_coding	-	CCDS52938.1	1	810	11	9.065	0.5	325.7	0	-4,-7	-	-	18	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000085909	ENSMUSP00000083073	TRANSLATION	protein_coding	-	CCDS23149.1	1	456	0	6.464	5.3	129.5	3	1,-3	-	-	13.084	PRINCIPAL:3
ENSMUSG00000032076	Cadm1	ENSMUST00000151624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032076	Cadm1	ENSMUST00000214542	ENSMUSP00000149715	TRANSLATION	protein_coding	-	-	1	63	0	0.4	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000152459	ENSMUSP00000124119	TRANSLATION	protein_coding	-	CCDS80990.1	1	474	0	6.704	6.5	129.5	3	1,-3	-	-	14	ALTERNATIVE:1
ENSMUSG00000032076	Cadm1	ENSMUST00000148925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032076	Cadm1	ENSMUST00000114548	ENSMUSP00000110195	TRANSLATION	protein_coding	-	CCDS23150.1	1	428	0	6.104	6.3	129.5	3	1,-3	-	-	12.728	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000124073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032076	Cadm1	ENSMUST00000034581	ENSMUSP00000034581	TRANSLATION	protein_coding	-	CCDS23147.1	1	417	0	5.84	6.3	129.5	3	1,-3	-	-	12.2	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000143026	ENSMUSP00000124555	TRANSLATION	protein_coding	-	-	5	390	0	5.84	0	129.5	3	1,-3	-	-	10.272	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000114547	ENSMUSP00000110194	TRANSLATION	protein_coding	-	CCDS23148.1	1	445	0	6.2	5.3	129.5	3	1,-3	-	-	12.556	MINOR
ENSMUSG00000032076	Cadm1	ENSMUST00000239368	ENSMUSP00000159247	TRANSLATION	protein_coding	-	-	-	361	0	5.824	0	129.5	0	1,-3	-	-	10.242	MINOR
ENSMUSG00000032526	Ss18l2	ENSMUST00000035113	ENSMUSP00000035113	TRANSLATION	protein_coding	-	CCDS40811.1	1	77	0	0	11.7	107.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000032526	Ss18l2	ENSMUST00000215833	ENSMUSP00000149190	TRANSLATION	protein_coding	-	-	3	96	0	0	0	63.5	0	-4,-5	-	-	3.348	MINOR
ENSMUSG00000032526	Ss18l2	ENSMUST00000213768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032526	Ss18l2	ENSMUST00000215966	ENSMUSP00000151078	TRANSLATION	protein_coding	-	-	1	49	0	0	0	60.8	0	-4,-5	-	-	3.186	MINOR
ENSMUSG00000032526	Ss18l2	ENSMUST00000214535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032526	Ss18l2	ENSMUST00000217579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032526	Ss18l2	ENSMUST00000215104	ENSMUSP00000148939	TRANSLATION	protein_coding	-	-	5	69	0	0	0	93.6	0	-4,-5	-	-	5.154	MINOR
ENSMUSG00000032192	Gnb5	ENSMUST00000215875	ENSMUSP00000150492	TRANSLATION	protein_coding	-	-	1	353	0	8.75	12.5	123.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032192	Gnb5	ENSMUST00000215002	ENSMUSP00000150270	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032192	Gnb5	ENSMUST00000076889	ENSMUSP00000076155	TRANSLATION	protein_coding	-	CCDS40692.1	1	395	0	8.75	3	123.3	0	-4,-5	-	-	12.696	MINOR
ENSMUSG00000032192	Gnb5	ENSMUST00000215891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032192	Gnb5	ENSMUST00000216290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032192	Gnb5	ENSMUST00000215346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032192	Gnb5	ENSMUST00000214744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032192	Gnb5	ENSMUST00000213990	ENSMUSP00000149938	TRANSLATION	protein_coding	-	CCDS40692.1	1	395	0	8.75	3	123.3	0	-4,-5	-	-	12.696	MINOR
ENSMUSG00000032558	Nphp3	ENSMUST00000193439	ENSMUSP00000141540	TRANSLATION	nonsense_mediated_decay	-	-	5	538	10	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032558	Nphp3	ENSMUST00000194774	ENSMUSP00000141596	TRANSLATION	protein_coding	-	-	1	1205	16	6.2384	0	197.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000032558	Nphp3	ENSMUST00000035167	ENSMUSP00000035167	TRANSLATION	protein_coding	-	CCDS40749.1	1	1325	16	6.2384	1.5	197.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000032558	Nphp3	ENSMUST00000194183	ENSMUSP00000142049	TRANSLATION	protein_coding	start	-	3	136	0	2.15	0	66	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032558	Nphp3	ENSMUST00000216593	ENSMUSP00000150368	TRANSLATION	protein_coding	start	-	5	43	0	1	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032558	Nphp3	ENSMUST00000192485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032558	Nphp3	ENSMUST00000193642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032558	Nphp3	ENSMUST00000191919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034252	Senp6	ENSMUST00000176527	ENSMUSP00000135719	TRANSLATION	protein_coding	start/stop	-	2	204	0	3.16	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034252	Senp6	ENSMUST00000175758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034252	Senp6	ENSMUST00000164859	ENSMUSP00000128918	TRANSLATION	protein_coding	-	-	1	966	4	4.36	0	119.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000034252	Senp6	ENSMUST00000176648	ENSMUSP00000135219	TRANSLATION	protein_coding	start	-	2	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034252	Senp6	ENSMUST00000176563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034252	Senp6	ENSMUST00000176640	ENSMUSP00000135494	TRANSLATION	protein_coding	stop	-	5	131	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034252	Senp6	ENSMUST00000175673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034252	Senp6	ENSMUST00000175910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034252	Senp6	ENSMUST00000037484	ENSMUSP00000047220	TRANSLATION	protein_coding	-	CCDS40705.1	1	1132	4	4.36	0.5	119.3	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000034252	Senp6	ENSMUST00000176607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034252	Senp6	ENSMUST00000165607	ENSMUSP00000126777	TRANSLATION	protein_coding	-	CCDS81040.1	1	1139	4	4.36	0.5	119.3	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000034252	Senp6	ENSMUST00000175722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034252	Senp6	ENSMUST00000176360	ENSMUSP00000135108	TRANSLATION	protein_coding	start/stop	-	5	285	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034252	Senp6	ENSMUST00000175999	ENSMUSP00000135401	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034252	Senp6	ENSMUST00000177544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040188	Scamp2	ENSMUST00000217200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040188	Scamp2	ENSMUST00000213662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040188	Scamp2	ENSMUST00000215942	ENSMUSP00000148996	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040188	Scamp2	ENSMUST00000216986	ENSMUSP00000150920	TRANSLATION	protein_coding	stop	-	3	200	0	0	0	55.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040188	Scamp2	ENSMUST00000045791	ENSMUSP00000038350	TRANSLATION	protein_coding	-	CCDS23224.1	1	329	0	0	5.1	229.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040188	Scamp2	ENSMUST00000216667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032553	Srprb	ENSMUST00000163567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032553	Srprb	ENSMUST00000035157	ENSMUSP00000035157	TRANSLATION	protein_coding	-	CCDS23450.1	1	269	18	5.5	6.3	244.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000032553	Srprb	ENSMUST00000190760	ENSMUSP00000151899	TRANSLATION	protein_coding	start	-	1	54	4	1.5	0	78	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032459	Mrps22	ENSMUST00000190150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032459	Mrps22	ENSMUST00000035034	ENSMUSP00000035034	TRANSLATION	protein_coding	-	CCDS23427.1	1	359	0	7.75	1.5	358.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000047257	Prss45	ENSMUST00000011391	ENSMUSP00000011391	TRANSLATION	protein_coding	-	CCDS23575.1	1	317	7	3.2	0.5	196.3	0	-1,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000047257	Prss45	ENSMUST00000146794	ENSMUSP00000120471	TRANSLATION	protein_coding	-	-	1	308	7	3.2	0	196.3	0	-1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000091345	Col6a5	ENSMUST00000165165	ENSMUSP00000131146	TRANSLATION	protein_coding	stop	-	5	2640	15	10.359	0.5	979.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091345	Col6a5	ENSMUST00000189127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091345	Col6a5	ENSMUST00000190193	ENSMUSP00000139398	TRANSLATION	protein_coding	-	CCDS85720.1	5	2640	15	10.359	0.5	979.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032480	Dhx30	ENSMUST00000196171	ENSMUSP00000143616	TRANSLATION	protein_coding	-	-	5	1186	10	11.176	1.5	158.5	0	-4,-2	-	-	18.192	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000199529	ENSMUSP00000142489	TRANSLATION	protein_coding	-	CCDS57706.1	5	1194	10	11.11	8.8	158.5	0	-4,-2	-	-	20.868	PRINCIPAL:1
ENSMUSG00000032480	Dhx30	ENSMUST00000199801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032480	Dhx30	ENSMUST00000196182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032480	Dhx30	ENSMUST00000197979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032480	Dhx30	ENSMUST00000196788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032480	Dhx30	ENSMUST00000196497	ENSMUSP00000143529	TRANSLATION	protein_coding	stop	-	3	101	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000200593	ENSMUSP00000143607	TRANSLATION	protein_coding	start/stop	-	3	239	0	2.03	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000199332	ENSMUSP00000142952	TRANSLATION	protein_coding	start	-	3	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000198026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032480	Dhx30	ENSMUST00000198443	ENSMUSP00000142836	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000200476	ENSMUSP00000143700	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000199693	ENSMUSP00000143272	TRANSLATION	protein_coding	start	-	3	72	0	0.95	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000197928	ENSMUSP00000142549	TRANSLATION	protein_coding	-	CCDS57706.1	1	1194	10	11.11	8.8	158.5	0	-4,-2	-	-	20.868	PRINCIPAL:1
ENSMUSG00000032480	Dhx30	ENSMUST00000197182	ENSMUSP00000142846	TRANSLATION	protein_coding	stop	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000198843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032480	Dhx30	ENSMUST00000199835	ENSMUSP00000142636	TRANSLATION	protein_coding	stop	-	3	175	0	3.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000200029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032480	Dhx30	ENSMUST00000196914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032480	Dhx30	ENSMUST00000111991	ENSMUSP00000107622	TRANSLATION	protein_coding	-	CCDS57706.1	5	1194	10	11.11	8.8	158.5	0	-4,-2	-	-	20.868	PRINCIPAL:1
ENSMUSG00000032480	Dhx30	ENSMUST00000197785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032480	Dhx30	ENSMUST00000200066	ENSMUSP00000143371	TRANSLATION	protein_coding	-	CCDS57706.1	1	1194	10	11.11	8.8	158.5	0	-4,-2	-	-	20.868	PRINCIPAL:1
ENSMUSG00000032480	Dhx30	ENSMUST00000196455	ENSMUSP00000143751	TRANSLATION	protein_coding	start/stop	-	3	134	0	1.83	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000062368	ENSMUSP00000062622	TRANSLATION	protein_coding	-	CCDS57705.1	1	1223	10	11.11	0.5	158.5	0	-4,0	-	-	17.868	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000198425	ENSMUSP00000142659	TRANSLATION	protein_coding	-	CCDS23560.1	5	1217	10	11.11	0.5	158.5	0	-4,-5	-	-	17.868	MINOR
ENSMUSG00000032480	Dhx30	ENSMUST00000165596	ENSMUSP00000129174	TRANSLATION	protein_coding	-	CCDS23560.1	5	1217	10	11.11	0.5	158.5	0	-4,-5	-	-	17.868	MINOR
ENSMUSG00000032571	Pik3r4	ENSMUST00000188784	ENSMUSP00000140988	TRANSLATION	protein_coding	-	-	1	305	0	2.3	0	47.3	0	-4,-5	-	-	2.628	MINOR
ENSMUSG00000032571	Pik3r4	ENSMUST00000187446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032571	Pik3r4	ENSMUST00000189691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032571	Pik3r4	ENSMUST00000190358	ENSMUSP00000139643	TRANSLATION	protein_coding	stop	-	2	174	0	0.8	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032571	Pik3r4	ENSMUST00000186943	ENSMUSP00000140311	TRANSLATION	protein_coding	stop	-	5	208	0	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032571	Pik3r4	ENSMUST00000188385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032571	Pik3r4	ENSMUST00000191268	ENSMUSP00000139427	TRANSLATION	protein_coding	-	CCDS40753.1	1	1358	0	8.96	1.5	103.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032571	Pik3r4	ENSMUST00000191117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032571	Pik3r4	ENSMUST00000187573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032571	Pik3r4	ENSMUST00000065778	ENSMUSP00000067400	TRANSLATION	protein_coding	-	CCDS40753.1	1	1358	0	8.96	1.5	103.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032571	Pik3r4	ENSMUST00000214254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061701	Fbxw20	ENSMUST00000198261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061701	Fbxw20	ENSMUST00000197329	ENSMUSP00000143126	TRANSLATION	protein_coding	stop	-	3	272	0	0	0	45.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061701	Fbxw20	ENSMUST00000079548	ENSMUSP00000078503	TRANSLATION	protein_coding	-	CCDS23549.1	1	468	0	0	0.5	45.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039285	Azi2	ENSMUST00000133814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039285	Azi2	ENSMUST00000154583	ENSMUSP00000122063	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039285	Azi2	ENSMUST00000134433	ENSMUSP00000114980	TRANSLATION	protein_coding	-	CCDS52959.1	1	283	0	1	0.5	61.2	0	-4,-5	-	-	10.866	MINOR
ENSMUSG00000039285	Azi2	ENSMUST00000127189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039285	Azi2	ENSMUST00000135251	ENSMUSP00000116971	TRANSLATION	protein_coding	stop	-	2	178	0	1	0	75.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039285	Azi2	ENSMUST00000130735	ENSMUSP00000114634	TRANSLATION	protein_coding	start	-	3	199	0	1	0	61.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039285	Azi2	ENSMUST00000143024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039285	Azi2	ENSMUST00000123690	ENSMUSP00000121245	TRANSLATION	protein_coding	start	-	5	67	0	1	0	62.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039285	Azi2	ENSMUST00000044454	ENSMUSP00000044350	TRANSLATION	protein_coding	-	CCDS40799.1	1	405	0	1	1.5	75.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039285	Azi2	ENSMUST00000133580	ENSMUSP00000118765	TRANSLATION	protein_coding	-	CCDS40799.1	1	405	0	1	1.5	75.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000016087	Fli1	ENSMUST00000016231	ENSMUSP00000016231	TRANSLATION	protein_coding	-	CCDS40571.1	1	452	0	4.74	9.7	219.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000016087	Fli1	ENSMUST00000183767	ENSMUSP00000138984	TRANSLATION	protein_coding	stop	-	5	209	0	2.84	0	98.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032387	Rbpms2	ENSMUST00000055844	ENSMUSP00000057600	TRANSLATION	protein_coding	-	CCDS23296.1	1	206	0	3.15	0.5	41	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032387	Rbpms2	ENSMUST00000216382	ENSMUSP00000151192	TRANSLATION	protein_coding	start/stop	-	5	191	0	3	0	41	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032387	Rbpms2	ENSMUST00000213927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032387	Rbpms2	ENSMUST00000216769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032387	Rbpms2	ENSMUST00000216342	ENSMUSP00000149535	TRANSLATION	protein_coding	start/stop	-	3	198	0	2.25	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032387	Rbpms2	ENSMUST00000169003	ENSMUSP00000131076	TRANSLATION	protein_coding	-	-	1	168	0	3.15	0	41	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000032120	C2cd2l	ENSMUST00000214602	ENSMUSP00000149180	TRANSLATION	protein_coding	-	-	1	654	0	4.55	0	0	1	-2,-5	-	-	6	MINOR
ENSMUSG00000032120	C2cd2l	ENSMUST00000216855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032120	C2cd2l	ENSMUST00000216222	ENSMUSP00000149342	TRANSLATION	nonsense_mediated_decay	start	-	1	361	0	3.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032120	C2cd2l	ENSMUST00000213160	ENSMUSP00000149989	TRANSLATION	protein_coding	start	-	3	212	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032120	C2cd2l	ENSMUST00000213298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032120	C2cd2l	ENSMUST00000213818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032120	C2cd2l	ENSMUST00000214915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032120	C2cd2l	ENSMUST00000213689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032120	C2cd2l	ENSMUST00000065080	ENSMUSP00000065233	TRANSLATION	protein_coding	-	CCDS23103.1	1	706	0	4.55	7.5	0	1	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000074123	7420426K07Rik	ENSMUST00000098460	ENSMUSP00000096060	TRANSLATION	protein_coding	-	CCDS23429.1	-	186	0	0	0.5	82.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043289	Mei4	ENSMUST00000189391	ENSMUSP00000139589	TRANSLATION	protein_coding	-	-	1	290	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043289	Mei4	ENSMUST00000057067	ENSMUSP00000061341	TRANSLATION	protein_coding	-	CCDS23371.1	1	389	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000043289	Mei4	ENSMUST00000189832	ENSMUSP00000140647	TRANSLATION	protein_coding	-	-	1	312	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000032572	Col6a4	ENSMUST00000218471	ENSMUSP00000151299	TRANSLATION	nonsense_mediated_decay	start	-	5	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032572	Col6a4	ENSMUST00000121963	ENSMUSP00000112472	TRANSLATION	protein_coding	-	CCDS52907.1	5	2309	15	12.255	0.5	898.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032572	Col6a4	ENSMUST00000149207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032572	Col6a4	ENSMUST00000137847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032254	Kif23	ENSMUST00000214940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000034815	ENSMUSP00000034815	TRANSLATION	protein_coding	-	CCDS40662.1	1	953	15	10.93	2.7	505.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032254	Kif23	ENSMUST00000215404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000214295	ENSMUSP00000149553	TRANSLATION	protein_coding	stop	-	1	563	15	9.03	0	358.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032254	Kif23	ENSMUST00000215743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000216812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032254	Kif23	ENSMUST00000215319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032254	Kif23	ENSMUST00000215965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000213159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032254	Kif23	ENSMUST00000216717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000216746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032254	Kif23	ENSMUST00000213595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054871	Tmem158	ENSMUST00000068140	ENSMUSP00000069161	TRANSLATION	protein_coding	-	CCDS23658.1	-	286	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000032530	Lyzl4	ENSMUST00000213757	ENSMUSP00000151031	TRANSLATION	protein_coding	stop	-	5	138	4	2.814	0	106.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032530	Lyzl4	ENSMUST00000214592	ENSMUSP00000150807	TRANSLATION	protein_coding	stop	-	5	90	0	1.8	0	59.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032530	Lyzl4	ENSMUST00000125075	ENSMUSP00000115284	TRANSLATION	protein_coding	stop	-	3	91	0	1.4	0	59.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032530	Lyzl4	ENSMUST00000077706	ENSMUSP00000076887	TRANSLATION	protein_coding	-	CCDS23632.1	1	145	4	3.144	3.9	109.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000032530	Lyzl4	ENSMUST00000120918	ENSMUSP00000113034	TRANSLATION	protein_coding	-	CCDS23632.1	1	145	4	3.144	3.9	109.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000025234	Arih1	ENSMUST00000168497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025234	Arih1	ENSMUST00000165322	ENSMUSP00000131516	TRANSLATION	protein_coding	-	-	5	476	24	12.5	0	80.2	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000025234	Arih1	ENSMUST00000168982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025234	Arih1	ENSMUST00000171856	ENSMUSP00000131140	TRANSLATION	nonsense_mediated_decay	start	-	3	25	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025234	Arih1	ENSMUST00000171975	ENSMUSP00000126531	TRANSLATION	protein_coding	-	CCDS52817.1	1	555	24	13.5	7.5	80.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025234	Arih1	ENSMUST00000026264	ENSMUSP00000026264	TRANSLATION	nonsense_mediated_decay	-	-	5	381	14	7	0	29.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025234	Arih1	ENSMUST00000168456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050503	Fbxl22	ENSMUST00000056890	ENSMUSP00000060137	TRANSLATION	protein_coding	-	CCDS23304.1	1	236	0	0.84	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096736	Gm17535	ENSMUST00000178641	ENSMUSP00000135988	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000048503	Tlcd5	ENSMUST00000213648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048503	Tlcd5	ENSMUST00000216126	ENSMUSP00000149500	TRANSLATION	protein_coding	stop	-	3	209	0	0	0	45.5	6	0,-4	-	-	-1	MINOR
ENSMUSG00000048503	Tlcd5	ENSMUST00000061833	ENSMUSP00000051435	TRANSLATION	protein_coding	-	CCDS23090.1	1	245	0	0	8.8	55.1	7	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000048503	Tlcd5	ENSMUST00000213544	ENSMUSP00000150692	TRANSLATION	protein_coding	-	CCDS23090.1	1	245	0	0	8.8	55.1	7	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000066897	Olfr872	ENSMUST00000086474	ENSMUSP00000083665	TRANSLATION	protein_coding	-	CCDS22874.2	2	323	0	0.2	0.5	151	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000002820	Atg4d	ENSMUST00000217591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002820	Atg4d	ENSMUST00000215767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002820	Atg4d	ENSMUST00000065005	ENSMUSP00000068450	TRANSLATION	protein_coding	-	CCDS22899.1	1	474	0	4.21	1.5	348.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002820	Atg4d	ENSMUST00000217269	ENSMUSP00000150253	TRANSLATION	nonsense_mediated_decay	start	-	2	100	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002820	Atg4d	ENSMUST00000216826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059820	Nkapd1	ENSMUST00000131351	ENSMUSP00000123319	TRANSLATION	protein_coding	-	CCDS23166.2	1	292	0	0	5.1	82.4	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000059820	Nkapd1	ENSMUST00000147671	ENSMUSP00000117265	TRANSLATION	protein_coding	stop	-	3	203	0	0	0	82.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000059820	Nkapd1	ENSMUST00000145139	ENSMUSP00000115196	TRANSLATION	protein_coding	-	-	2	125	0	0	0	61.3	0	-4,-2	-	-	4.464	MINOR
ENSMUSG00000059820	Nkapd1	ENSMUST00000171462	ENSMUSP00000133259	TRANSLATION	protein_coding	-	CCDS23166.2	3	292	0	0	5.1	82.4	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000059820	Nkapd1	ENSMUST00000155435	ENSMUSP00000121198	TRANSLATION	protein_coding	stop	-	3	214	0	0	0	82.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032513	Gorasp1	ENSMUST00000213409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032513	Gorasp1	ENSMUST00000035099	ENSMUSP00000035099	TRANSLATION	protein_coding	-	CCDS23619.1	1	446	3	5.05	1.5	191.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032513	Gorasp1	ENSMUST00000214118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020253	Ppm1m	ENSMUST00000215742	ENSMUSP00000148953	TRANSLATION	nonsense_mediated_decay	start	-	5	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020253	Ppm1m	ENSMUST00000213197	ENSMUSP00000151133	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020253	Ppm1m	ENSMUST00000076258	ENSMUSP00000075607	TRANSLATION	protein_coding	-	CCDS23471.1	1	406	6	5.447	1.5	105.4	0	-4,-7	-	-	18.161	ALTERNATIVE:2
ENSMUSG00000020253	Ppm1m	ENSMUST00000140761	ENSMUSP00000117908	TRANSLATION	protein_coding	-	CCDS23472.2	1	462	6	5.447	4.1	105.4	0	-4,0	-	-	19	PRINCIPAL:4
ENSMUSG00000020253	Ppm1m	ENSMUST00000136431	ENSMUSP00000118165	TRANSLATION	protein_coding	start	-	3	204	1	2.895	0	54.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020253	Ppm1m	ENSMUST00000150731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020253	Ppm1m	ENSMUST00000152359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003410	Elavl3	ENSMUST00000003501	ENSMUSP00000003501	TRANSLATION	protein_coding	-	CCDS52741.1	1	367	0	5.37	12	211.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003410	Elavl3	ENSMUST00000213700	ENSMUSP00000150771	TRANSLATION	protein_coding	start/stop	-	3	132	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003410	Elavl3	ENSMUST00000215901	ENSMUSP00000149816	TRANSLATION	protein_coding	-	-	1	250	0	4.73	0	138.6	0	-4,-5	-	-	6.324	MINOR
ENSMUSG00000054141	Olfr24	ENSMUST00000066997	ENSMUSP00000064189	TRANSLATION	protein_coding	-	CCDS22846.1	-	313	0	0.42	2.8	211.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054141	Olfr24	ENSMUST00000214366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054141	Olfr24	ENSMUST00000216754	ENSMUSP00000149702	TRANSLATION	protein_coding	-	CCDS22846.1	2	313	0	0.42	2.8	211.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032315	Cyp1a1	ENSMUST00000216433	ENSMUSP00000150277	TRANSLATION	protein_coding	-	CCDS23230.1	1	524	29	5.75	1.5	368.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032315	Cyp1a1	ENSMUST00000034865	ENSMUSP00000034865	TRANSLATION	protein_coding	-	CCDS23230.1	1	524	29	5.75	1.5	368.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000093456	Gm20662	ENSMUST00000176454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093456	Gm20662	ENSMUST00000176356	ENSMUSP00000135269	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	40	0	0	0	0	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000093456	Gm20662	ENSMUST00000176459	ENSMUSP00000135534	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	28	0	0	0	0	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037801	Iqch	ENSMUST00000163624	ENSMUSP00000128482	TRANSLATION	protein_coding	-	-	1	1030	0	0	0	19	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037801	Iqch	ENSMUST00000080527	ENSMUSP00000079370	TRANSLATION	protein_coding	-	-	1	837	0	0	0	19	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037801	Iqch	ENSMUST00000171243	ENSMUSP00000131828	TRANSLATION	protein_coding	-	-	5	1032	0	0	0	19	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037801	Iqch	ENSMUST00000170960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037801	Iqch	ENSMUST00000163982	ENSMUSP00000126546	TRANSLATION	protein_coding	-	CCDS52831.1	1	1042	0	0	0.5	19	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000037801	Iqch	ENSMUST00000042322	ENSMUSP00000047953	TRANSLATION	protein_coding	-	CCDS81021.1	1	1071	0	0	1.5	19	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032243	Itga11	ENSMUST00000159012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032243	Itga11	ENSMUST00000034774	ENSMUSP00000034774	TRANSLATION	protein_coding	-	CCDS23265.1	1	1188	21	14.72	4.1	295.3	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000025894	Aasdhppt	ENSMUST00000212066	ENSMUSP00000148826	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025894	Aasdhppt	ENSMUST00000212897	ENSMUSP00000148272	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025894	Aasdhppt	ENSMUST00000051589	ENSMUSP00000053971	TRANSLATION	protein_coding	-	CCDS22794.1	1	309	11	6.08	6.3	64.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000038742	Angptl6	ENSMUST00000043726	ENSMUSP00000035784	TRANSLATION	protein_coding	-	CCDS22886.1	1	457	10	3	1.5	221.3	0	1,0	-	-	18	PRINCIPAL:1
ENSMUSG00000046603	Tcaim	ENSMUST00000052740	ENSMUSP00000049759	TRANSLATION	protein_coding	-	CCDS23647.2	1	509	0	0	1.5	529.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000046603	Tcaim	ENSMUST00000149659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046603	Tcaim	ENSMUST00000213178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046603	Tcaim	ENSMUST00000136274	ENSMUSP00000120948	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	0	0	105.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000053914	Kdm4d	ENSMUST00000058796	ENSMUSP00000061632	TRANSLATION	protein_coding	-	CCDS22822.2	1	510	15	1	1.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053914	Kdm4d	ENSMUST00000115647	ENSMUSP00000111311	TRANSLATION	protein_coding	stop	-	1	450	15	1	0	198.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025237	Parp6	ENSMUST00000050483	ENSMUSP00000063065	TRANSLATION	protein_coding	-	-	1	610	0	1.845	4	47.7	0	-4,-5	-	-	12.412	ALTERNATIVE:2
ENSMUSG00000025237	Parp6	ENSMUST00000213419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000214984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000167091	ENSMUSP00000129456	TRANSLATION	nonsense_mediated_decay	-	-	1	485	0	1.295	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025237	Parp6	ENSMUST00000216482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000214956	ENSMUSP00000150849	TRANSLATION	protein_coding	start	-	3	134	0	0.04	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025237	Parp6	ENSMUST00000026267	ENSMUSP00000026267	TRANSLATION	protein_coding	-	CCDS57680.1	5	630	0	1.845	4	47.7	0	-4,-5	-	-	12.412	PRINCIPAL:2
ENSMUSG00000025237	Parp6	ENSMUST00000217284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000216351	ENSMUSP00000148866	TRANSLATION	nonsense_mediated_decay	-	-	1	498	0	2.045	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025237	Parp6	ENSMUST00000217195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000215381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025237	Parp6	ENSMUST00000216385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095525	Olfr834	ENSMUST00000086492	ENSMUSP00000083680	TRANSLATION	protein_coding	-	CCDS22850.1	-	312	0	0.36	5.1	171.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032193	Ldlr	ENSMUST00000214359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032193	Ldlr	ENSMUST00000215917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032193	Ldlr	ENSMUST00000217613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032193	Ldlr	ENSMUST00000217111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032193	Ldlr	ENSMUST00000213114	ENSMUSP00000149431	TRANSLATION	protein_coding	-	-	1	810	59	14.35	0.5	637.8	1	4,-1	-	-	13.692	MINOR
ENSMUSG00000032193	Ldlr	ENSMUST00000034713	ENSMUSP00000034713	TRANSLATION	protein_coding	-	CCDS22910.1	1	862	59	15.35	0.5	676.3	1	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032193	Ldlr	ENSMUST00000214549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055069	Rab39	ENSMUST00000068449	ENSMUSP00000063804	TRANSLATION	protein_coding	-	CCDS23185.1	1	217	22	1.6	8.8	187.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000078116	Olfr828	ENSMUST00000104914	ENSMUSP00000100514	TRANSLATION	protein_coding	-	CCDS40541.1	-	312	0	0.36	2.7	164.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000078116	Olfr828	ENSMUST00000215380	ENSMUSP00000148853	TRANSLATION	protein_coding	-	CCDS40541.1	3	312	0	0.36	2.7	164.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032611	1700102P08Rik	ENSMUST00000035234	ENSMUSP00000035234	TRANSLATION	protein_coding	-	CCDS23524.1	1	252	0	0	1.5	446.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032611	1700102P08Rik	ENSMUST00000192995	ENSMUSP00000141566	TRANSLATION	protein_coding	-	-	3	166	0	0	0	261.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000079260	Tmppe	ENSMUST00000111820	ENSMUSP00000107451	TRANSLATION	protein_coding	-	CCDS52951.1	1	447	8	0	1.5	45.4	0	-1,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047606	Ankrd34c	ENSMUST00000060700	ENSMUSP00000056787	TRANSLATION	protein_coding	-	CCDS23397.1	1	534	0	0	5.1	50.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047606	Ankrd34c	ENSMUST00000185470	ENSMUSP00000140919	TRANSLATION	protein_coding	-	CCDS23397.1	1	534	0	0	5.1	50.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000062151	Unc13c	ENSMUST00000075245	ENSMUSP00000074726	TRANSLATION	protein_coding	-	CCDS40690.1	5	2210	13	19.955	0.5	463.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062151	Unc13c	ENSMUST00000184666	ENSMUSP00000139027	TRANSLATION	protein_coding	-	CCDS40690.1	5	2210	13	19.955	0.5	463.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000032575	Manf	ENSMUST00000160503	ENSMUSP00000124453	TRANSLATION	protein_coding	start	-	3	128	0	3.08	0	140.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032575	Manf	ENSMUST00000161272	ENSMUSP00000125424	TRANSLATION	protein_coding	start	-	3	52	0	1.198	0	65.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032575	Manf	ENSMUST00000162801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032575	Manf	ENSMUST00000159283	ENSMUSP00000124562	TRANSLATION	protein_coding	-	CCDS23486.1	1	179	0	4.08	5.2	234	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000032575	Manf	ENSMUST00000069036	ENSMUSP00000066534	TRANSLATION	protein_coding	-	-	1	165	0	3.43	0	228.9	0	-4,-5	-	-	10.392	MINOR
ENSMUSG00000032575	Manf	ENSMUST00000160978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032575	Manf	ENSMUST00000159620	ENSMUSP00000123907	TRANSLATION	protein_coding	start	-	3	121	0	3.278	0	140.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032023	Jhy	ENSMUST00000162122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032023	Jhy	ENSMUST00000160120	ENSMUSP00000124975	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032023	Jhy	ENSMUST00000034521	ENSMUSP00000034521	TRANSLATION	protein_coding	-	CCDS40592.1	5	770	0	0	0.5	117.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091411	Gm5916	ENSMUST00000168452	ENSMUSP00000125855	TRANSLATION	protein_coding	-	CCDS52762.1	1	102	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000046186	Cd109	ENSMUST00000163608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046186	Cd109	ENSMUST00000093812	ENSMUSP00000091330	TRANSLATION	protein_coding	-	CCDS23365.1	1	1442	2	17.781	0.5	585	0	4,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000033419	Snap91	ENSMUST00000167014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033419	Snap91	ENSMUST00000074501	ENSMUSP00000074095	TRANSLATION	protein_coding	-	CCDS72288.1	1	582	4	8	0.5	282.9	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000033419	Snap91	ENSMUST00000190388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033419	Snap91	ENSMUST00000239074	ENSMUSP00000159021	TRANSLATION	protein_coding	-	-	-	894	4	8	0.5	282.9	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000033419	Snap91	ENSMUST00000189004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033419	Snap91	ENSMUST00000189762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033419	Snap91	ENSMUST00000036347	ENSMUSP00000046189	TRANSLATION	protein_coding	-	-	5	868	4	8	0.5	282.9	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000033419	Snap91	ENSMUST00000074468	ENSMUSP00000074066	TRANSLATION	protein_coding	-	-	5	901	4	8	1.5	282.9	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000033419	Snap91	ENSMUST00000190089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033419	Snap91	ENSMUST00000098495	ENSMUSP00000096096	TRANSLATION	protein_coding	-	CCDS72289.1	1	838	4	8	0.5	282.9	0	-4,-6	-	-	16	PRINCIPAL:4
ENSMUSG00000033419	Snap91	ENSMUST00000191290	ENSMUSP00000141065	TRANSLATION	protein_coding	stop	-	5	219	4	5.75	0	204.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000098332	Pigbos1	ENSMUST00000184319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098332	Pigbos1	ENSMUST00000184126	ENSMUSP00000159173	TRANSLATION	protein_coding	-	-	1	57	0	0	2.9	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000010067	Rassf1	ENSMUST00000122225	ENSMUSP00000113252	TRANSLATION	protein_coding	-	-	5	344	9	5	1.2	133.4	0	-4,-5	-	-	16.209	MINOR
ENSMUSG00000010067	Rassf1	ENSMUST00000156198	ENSMUSP00000117722	TRANSLATION	nonsense_mediated_decay	-	-	5	84	5	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010067	Rassf1	ENSMUST00000144129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010067	Rassf1	ENSMUST00000191832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010067	Rassf1	ENSMUST00000129320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010067	Rassf1	ENSMUST00000010211	ENSMUSP00000010211	TRANSLATION	protein_coding	-	CCDS23494.1	1	270	0	3.6	7.5	133.4	0	-4,-5	-	-	10.314	MINOR
ENSMUSG00000010067	Rassf1	ENSMUST00000125080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010067	Rassf1	ENSMUST00000125386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010067	Rassf1	ENSMUST00000093786	ENSMUSP00000091301	TRANSLATION	protein_coding	-	CCDS57699.1	1	340	9	5	5.1	164.8	0	-4,-5	-	-	19.893	PRINCIPAL:1
ENSMUSG00000010067	Rassf1	ENSMUST00000121635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054978	Kbtbd13	ENSMUST00000068307	ENSMUSP00000136872	TRANSLATION	protein_coding	-	CCDS57682.1	-	458	0	0.2	2.9	79.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061165	Olfr160	ENSMUST00000104875	ENSMUSP00000100468	TRANSLATION	protein_coding	-	CCDS40586.1	-	309	0	0.2	6.4	162.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000061165	Olfr160	ENSMUST00000215727	ENSMUSP00000151178	TRANSLATION	protein_coding	-	CCDS40586.1	5	309	0	0.2	6.4	162.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000061165	Olfr160	ENSMUST00000211952	ENSMUSP00000148600	TRANSLATION	protein_coding	-	CCDS40586.1	3	309	0	0.2	6.4	162.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063380	Olfr945	ENSMUST00000076903	ENSMUSP00000076169	TRANSLATION	protein_coding	-	CCDS23042.1	-	319	0	0.32	1.5	171	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000063380	Olfr945	ENSMUST00000216698	ENSMUSP00000151086	TRANSLATION	protein_coding	-	-	5	316	0	0.32	1.5	171	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000008590	Htr3b	ENSMUST00000008734	ENSMUSP00000008734	TRANSLATION	protein_coding	-	CCDS23160.1	1	437	0	5.7	1.5	210.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031990	Jam3	ENSMUST00000034472	ENSMUSP00000034472	TRANSLATION	protein_coding	-	CCDS22939.1	1	310	0	3.85	2.9	97.1	0	0,0	-	-	12	PRINCIPAL:1
ENSMUSG00000031990	Jam3	ENSMUST00000213682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031990	Jam3	ENSMUST00000215446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031990	Jam3	ENSMUST00000167074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031990	Jam3	ENSMUST00000213170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023093	Pate12	ENSMUST00000041537	ENSMUSP00000048154	TRANSLATION	protein_coding	-	CCDS52764.1	5	99	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000050901	Mtnr1b	ENSMUST00000057920	ENSMUSP00000053086	TRANSLATION	protein_coding	-	CCDS22841.1	1	364	0	1.08	1.5	159.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050901	Mtnr1b	ENSMUST00000182947	ENSMUSP00000138524	TRANSLATION	nonsense_mediated_decay	-	-	2	364	0	1.08	1.5	159.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000136731	ENSMUSP00000120444	TRANSLATION	protein_coding	-	-	5	1828	16	31.14	9.6	1213.4	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000034593	Myo5a	ENSMUST00000123128	ENSMUSP00000116028	TRANSLATION	protein_coding	-	CCDS52860.1	5	1853	16	31.14	4.1	1213.4	0	-4,-5	-	-	19.08	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000153404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000149032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000148144	ENSMUSP00000121158	TRANSLATION	protein_coding	start	-	5	585	0	8.81	0	111.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000123531	ENSMUSP00000122773	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	1.33	0	20.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000149823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000136871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000143355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000129281	ENSMUSP00000118881	TRANSLATION	protein_coding	start/stop	-	5	228	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000142181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034593	Myo5a	ENSMUST00000136604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034593	Myo5a	ENSMUST00000130384	ENSMUSP00000114803	TRANSLATION	protein_coding	start/stop	-	3	217	0	0.56	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034593	Myo5a	ENSMUST00000155282	ENSMUSP00000117493	TRANSLATION	protein_coding	-	-	5	1855	16	31.14	6.6	1213.4	0	-4,-5	-	-	19.953	PRINCIPAL:5
ENSMUSG00000032184	Lysmd2	ENSMUST00000213292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032184	Lysmd2	ENSMUST00000034702	ENSMUSP00000034702	TRANSLATION	protein_coding	-	CCDS40693.1	1	215	0	0.9	2.9	39	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032184	Lysmd2	ENSMUST00000214961	ENSMUSP00000149065	TRANSLATION	nonsense_mediated_decay	-	-	5	104	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049334	Olfr902	ENSMUST00000213105	ENSMUSP00000151061	TRANSLATION	protein_coding	-	CCDS52772.1	5	309	0	0.42	2.7	162.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049334	Olfr902	ENSMUST00000050733	ENSMUSP00000055975	TRANSLATION	protein_coding	-	CCDS52772.1	-	309	0	0.42	2.7	162.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032398	Snapc5	ENSMUST00000034965	ENSMUSP00000034965	TRANSLATION	protein_coding	-	CCDS23276.1	1	102	0	0	0.5	81.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079559	Colca2	ENSMUST00000239415	ENSMUSP00000159303	TRANSLATION	protein_coding	-	-	-	253	0	0	0	25.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079559	Colca2	ENSMUST00000114427	ENSMUSP00000110070	TRANSLATION	protein_coding	-	CCDS57676.1	3	239	0	0	1.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000079559	Colca2	ENSMUST00000215038	ENSMUSP00000150539	TRANSLATION	protein_coding	-	CCDS57676.1	5	239	0	0	1.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032261	Sh3bgrl2	ENSMUST00000185664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032261	Sh3bgrl2	ENSMUST00000188617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032261	Sh3bgrl2	ENSMUST00000188030	ENSMUSP00000140348	TRANSLATION	protein_coding	-	-	1	93	0	1.5	0	121.9	0	-4,-7	-	-	7.734	MINOR
ENSMUSG00000032261	Sh3bgrl2	ENSMUST00000113215	ENSMUSP00000108841	TRANSLATION	protein_coding	-	CCDS40708.1	1	107	0	2.25	7.6	159.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032261	Sh3bgrl2	ENSMUST00000188241	ENSMUSP00000140951	TRANSLATION	protein_coding	-	-	1	120	0	2.25	0	159.7	0	-4,-7	-	-	12	MINOR
ENSMUSG00000074001	Klhl40	ENSMUST00000216358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074001	Klhl40	ENSMUST00000098272	ENSMUSP00000095873	TRANSLATION	protein_coding	-	CCDS23637.1	1	621	0	5.4	5.1	257.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032423	Syncrip	ENSMUST00000174688	ENSMUSP00000133716	TRANSLATION	protein_coding	-	-	5	448	0	8.108	2	107	0	-4,-5	-	-	4.226	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000069221	ENSMUSP00000063744	TRANSLATION	protein_coding	-	CCDS23388.1	1	562	0	10.908	13	147.6	0	-4,-5	-	-	15.404	PRINCIPAL:3
ENSMUSG00000032423	Syncrip	ENSMUST00000172828	ENSMUSP00000133829	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000187770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032423	Syncrip	ENSMUST00000174269	ENSMUSP00000134506	TRANSLATION	protein_coding	-	-	5	527	0	9.908	1.2	143.5	0	-4,-5	-	-	9.788	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000173801	ENSMUSP00000133649	TRANSLATION	protein_coding	-	CCDS57686.1	1	623	0	10.908	15	147.6	0	-4,-5	-	-	15.976	ALTERNATIVE:1
ENSMUSG00000032423	Syncrip	ENSMUST00000174391	ENSMUSP00000134342	TRANSLATION	protein_coding	-	CCDS81048.1	1	464	0	8.578	5.3	148	0	-4,-5	-	-	8.566	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000174145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032423	Syncrip	ENSMUST00000172508	ENSMUSP00000133292	TRANSLATION	protein_coding	stop	-	5	94	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000174361	ENSMUSP00000134722	TRANSLATION	protein_coding	-	-	5	588	0	9.908	1.2	143.5	0	-4,-5	-	-	9.788	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000173405	ENSMUSP00000133343	TRANSLATION	protein_coding	stop	-	3	196	0	5.358	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032423	Syncrip	ENSMUST00000174282	ENSMUSP00000134071	TRANSLATION	protein_coding	-	CCDS72292.1	1	561	0	10.908	13	147.6	0	-4,-5	-	-	15.404	ALTERNATIVE:1
ENSMUSG00000032017	Grik4	ENSMUST00000114865	ENSMUSP00000110515	TRANSLATION	protein_coding	-	CCDS23089.1	1	956	0	16.81	8.8	514.6	3	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032017	Grik4	ENSMUST00000034515	ENSMUSP00000034515	TRANSLATION	protein_coding	-	CCDS23089.1	5	956	0	16.81	8.8	514.6	3	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000034115	Scn11a	ENSMUST00000070617	ENSMUSP00000065466	TRANSLATION	protein_coding	-	CCDS40804.1	1	1765	0	8.9	0.5	933.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034115	Scn11a	ENSMUST00000215718	ENSMUSP00000149420	TRANSLATION	protein_coding	-	CCDS40804.1	1	1765	0	8.9	0.5	933.4	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023473	Celsr3	ENSMUST00000213524	ENSMUSP00000150759	TRANSLATION	protein_coding	-	-	1	3309	90	13.005	1.5	1281.8	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000023473	Celsr3	ENSMUST00000193726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023473	Celsr3	ENSMUST00000024238	ENSMUSP00000024238	TRANSLATION	protein_coding	-	-	1	3301	90	12.845	0.5	1208.6	0	0,-4	-	-	13.29	MINOR
ENSMUSG00000023473	Celsr3	ENSMUST00000195255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023473	Celsr3	ENSMUST00000194079	ENSMUSP00000141789	TRANSLATION	protein_coding	start/stop	-	1	472	0	2.4	0	151.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000023473	Celsr3	ENSMUST00000195857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023473	Celsr3	ENSMUST00000192235	ENSMUSP00000141429	TRANSLATION	protein_coding	start/stop	-	3	240	7	1	0	49.2	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000000167	Pih1d2	ENSMUST00000000171	ENSMUSP00000000171	TRANSLATION	protein_coding	-	CCDS23167.1	1	315	0	0.97	3.9	97	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000000167	Pih1d2	ENSMUST00000125606	ENSMUSP00000121100	TRANSLATION	protein_coding	stop	-	2	140	0	0.57	0	50.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000167	Pih1d2	ENSMUST00000151197	ENSMUSP00000119253	TRANSLATION	protein_coding	stop	-	5	235	0	0.97	0	61.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000167	Pih1d2	ENSMUST00000155773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000167	Pih1d2	ENSMUST00000124029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000167	Pih1d2	ENSMUST00000141366	ENSMUSP00000122789	TRANSLATION	protein_coding	stop	-	3	198	0	0.97	0	60	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000167	Pih1d2	ENSMUST00000132187	ENSMUSP00000118064	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	0.06	0	27.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032093	Cd3e	ENSMUST00000214582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032093	Cd3e	ENSMUST00000217486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032093	Cd3e	ENSMUST00000102832	ENSMUSP00000099896	TRANSLATION	protein_coding	-	CCDS23125.1	1	189	0	3.264	0.5	145	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032093	Cd3e	ENSMUST00000214081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042757	Tmem108	ENSMUST00000186455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042757	Tmem108	ENSMUST00000049452	ENSMUSP00000046021	TRANSLATION	protein_coding	-	CCDS23455.1	1	574	0	0	0.5	902.4	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042757	Tmem108	ENSMUST00000215136	ENSMUSP00000149890	TRANSLATION	protein_coding	-	-	3	45	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042757	Tmem108	ENSMUST00000189588	ENSMUSP00000140027	TRANSLATION	protein_coding	-	CCDS23455.1	1	574	0	0	0.5	902.4	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042757	Tmem108	ENSMUST00000189066	ENSMUSP00000141160	TRANSLATION	protein_coding	-	CCDS23455.1	1	574	0	0	0.5	902.4	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042757	Tmem108	ENSMUST00000191069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032115	Hyou1	ENSMUST00000160902	ENSMUSP00000125594	TRANSLATION	protein_coding	-	CCDS23107.1	5	999	22	9.216	7.5	355.6	0	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000032115	Hyou1	ENSMUST00000161147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032115	Hyou1	ENSMUST00000162560	ENSMUSP00000123749	TRANSLATION	nonsense_mediated_decay	-	-	5	172	5	3.412	0	64.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032115	Hyou1	ENSMUST00000161318	ENSMUSP00000123700	TRANSLATION	protein_coding	-	CCDS23107.1	5	999	22	9.216	7.5	355.6	0	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000032115	Hyou1	ENSMUST00000159473	ENSMUSP00000124177	TRANSLATION	protein_coding	start/stop	-	5	227	10	3.8	0	124.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032115	Hyou1	ENSMUST00000161537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032115	Hyou1	ENSMUST00000160112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032115	Hyou1	ENSMUST00000066601	ENSMUSP00000068594	TRANSLATION	protein_coding	-	CCDS23107.1	1	999	22	9.216	7.5	355.6	0	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000032115	Hyou1	ENSMUST00000217019	ENSMUSP00000148882	TRANSLATION	protein_coding	stop	-	3	153	5	2.78	0	55.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032212	Sltm	ENSMUST00000215714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032212	Sltm	ENSMUST00000216881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032212	Sltm	ENSMUST00000213808	ENSMUSP00000149511	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0	0	40.2	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000032212	Sltm	ENSMUST00000049263	ENSMUSP00000049112	TRANSLATION	protein_coding	-	CCDS23322.1	1	1031	0	1.24	0.5	78.7	0	-1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000032212	Sltm	ENSMUST00000217593	ENSMUSP00000150324	TRANSLATION	nonsense_mediated_decay	-	-	1	664	0	1.24	0	78.7	0	-1,-2	-	-	-1	MINOR
ENSMUSG00000032212	Sltm	ENSMUST00000213362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032212	Sltm	ENSMUST00000214834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032212	Sltm	ENSMUST00000216816	ENSMUSP00000149059	TRANSLATION	protein_coding	-	-	5	1013	0	1.24	0.5	78.7	0	-1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032309	Fbxo22	ENSMUST00000146201	ENSMUSP00000117106	TRANSLATION	protein_coding	-	-	1	299	0	0	1.7	0	0	-4,-5	-	-	0.241	MINOR
ENSMUSG00000032309	Fbxo22	ENSMUST00000140375	ENSMUSP00000117341	TRANSLATION	nonsense_mediated_decay	-	-	5	166	0	0	0	25.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032309	Fbxo22	ENSMUST00000034859	ENSMUSP00000034859	TRANSLATION	protein_coding	-	CCDS23202.2	1	402	0	0	3.9	25.4	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000032309	Fbxo22	ENSMUST00000153970	ENSMUSP00000122828	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032309	Fbxo22	ENSMUST00000133795	ENSMUSP00000119304	TRANSLATION	protein_coding	stop	-	5	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006676	Usp19	ENSMUST00000006854	ENSMUSP00000006854	TRANSLATION	protein_coding	-	CCDS23529.1	1	1360	12	10.15	2.7	549.3	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000006676	Usp19	ENSMUST00000194225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000085044	ENSMUSP00000082119	TRANSLATION	protein_coding	-	CCDS52924.1	1	1323	12	10.15	2.7	549.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000006676	Usp19	ENSMUST00000195763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000193183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000193975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000194171	ENSMUSP00000141628	TRANSLATION	protein_coding	start	-	1	991	12	9.15	0	495.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006676	Usp19	ENSMUST00000194863	ENSMUSP00000141826	TRANSLATION	protein_coding	start/stop	-	3	295	8	1	0	33.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006676	Usp19	ENSMUST00000193678	ENSMUSP00000141738	TRANSLATION	protein_coding	-	CCDS81075.1	1	1322	12	10.15	2.7	536.6	0	-4,-6	-	-	17.238	ALTERNATIVE:2
ENSMUSG00000006676	Usp19	ENSMUST00000194499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000193571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000192854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000178075	ENSMUSP00000135930	TRANSLATION	protein_coding	-	CCDS57702.1	1	1324	12	10.15	2.7	549.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000006676	Usp19	ENSMUST00000193412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006676	Usp19	ENSMUST00000166103	ENSMUSP00000128573	TRANSLATION	protein_coding	-	CCDS52925.1	1	1299	12	9.4	0.5	538.1	0	-4,-6	-	-	15.828	MINOR
ENSMUSG00000006676	Usp19	ENSMUST00000193558	ENSMUSP00000142137	TRANSLATION	protein_coding	start/stop	-	1	128	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032060	Cryab	ENSMUST00000214962	ENSMUSP00000149759	TRANSLATION	protein_coding	-	CCDS23172.1	1	175	0	3.75	10.8	189.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032060	Cryab	ENSMUST00000214609	ENSMUSP00000149454	TRANSLATION	protein_coding	stop	-	5	130	0	2.75	0	161.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032060	Cryab	ENSMUST00000034562	ENSMUSP00000034562	TRANSLATION	protein_coding	-	CCDS23172.1	1	175	0	3.75	10.8	189.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032060	Cryab	ENSMUST00000216755	ENSMUSP00000150669	TRANSLATION	protein_coding	-	CCDS23172.1	1	175	0	3.75	10.8	189.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032060	Cryab	ENSMUST00000217475	ENSMUSP00000149803	TRANSLATION	protein_coding	-	CCDS23172.1	1	175	0	3.75	10.8	189.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032060	Cryab	ENSMUST00000216393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000138736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000148611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000165231	ENSMUSP00000128874	TRANSLATION	protein_coding	-	CCDS52963.1	5	1741	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038060	Dlec1	ENSMUST00000128211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000055775	ENSMUSP00000052645	TRANSLATION	nonsense_mediated_decay	-	-	1	646	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038060	Dlec1	ENSMUST00000124213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000137047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038060	Dlec1	ENSMUST00000140326	ENSMUSP00000122380	TRANSLATION	protein_coding	-	-	5	1741	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000035024	Ncapd3	ENSMUST00000217311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035024	Ncapd3	ENSMUST00000073127	ENSMUSP00000072871	TRANSLATION	protein_coding	-	CCDS57665.1	5	1506	0	0	0.5	93.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035024	Ncapd3	ENSMUST00000214432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035024	Ncapd3	ENSMUST00000216677	ENSMUSP00000150938	TRANSLATION	protein_coding	-	CCDS57665.1	1	1506	0	0	0.5	93.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035024	Ncapd3	ENSMUST00000214270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035024	Ncapd3	ENSMUST00000086198	ENSMUSP00000083374	TRANSLATION	protein_coding	-	-	1	1223	0	0	0	93.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000041620	Mmp1b	ENSMUST00000047888	ENSMUSP00000047261	TRANSLATION	protein_coding	-	CCDS22805.1	1	463	20	9	0.5	320.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032131	Abcg4	ENSMUST00000161206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032131	Abcg4	ENSMUST00000159997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032131	Abcg4	ENSMUST00000162783	ENSMUSP00000123999	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	1.55	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032131	Abcg4	ENSMUST00000161354	ENSMUSP00000124647	TRANSLATION	protein_coding	-	CCDS23101.1	1	646	8	9.36	7.5	247.9	5	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032131	Abcg4	ENSMUST00000160384	ENSMUSP00000124583	TRANSLATION	protein_coding	stop	-	5	83	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032131	Abcg4	ENSMUST00000085979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032131	Abcg4	ENSMUST00000161408	ENSMUSP00000124154	TRANSLATION	protein_coding	stop	-	5	104	1	0.24	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032131	Abcg4	ENSMUST00000160323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032131	Abcg4	ENSMUST00000034648	ENSMUSP00000034648	TRANSLATION	protein_coding	-	CCDS23101.1	1	646	8	9.36	7.5	247.9	5	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032131	Abcg4	ENSMUST00000159385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035914	Cd276	ENSMUST00000039788	ENSMUSP00000042681	TRANSLATION	protein_coding	-	CCDS23244.1	1	316	0	4.6	2.7	67.6	2	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035914	Cd276	ENSMUST00000213722	ENSMUSP00000150714	TRANSLATION	protein_coding	start/stop	-	3	145	0	2.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035914	Cd276	ENSMUST00000165365	ENSMUSP00000129418	TRANSLATION	protein_coding	-	CCDS23244.1	1	316	0	4.6	2.7	67.6	2	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000035914	Cd276	ENSMUST00000216629	ENSMUSP00000151025	TRANSLATION	protein_coding	start	-	3	94	0	0.6	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000032135	Mcam	ENSMUST00000216002	ENSMUSP00000149002	TRANSLATION	protein_coding	stop	-	2	142	0	1.83	0	31.7	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032135	Mcam	ENSMUST00000132490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032135	Mcam	ENSMUST00000034650	ENSMUSP00000034650	TRANSLATION	protein_coding	-	CCDS23097.1	1	648	0	8.372	1.5	195.9	1	1,-2	-	-	11.472	PRINCIPAL:2
ENSMUSG00000032135	Mcam	ENSMUST00000149241	ENSMUSP00000121090	TRANSLATION	nonsense_mediated_decay	-	-	5	146	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000032135	Mcam	ENSMUST00000098852	ENSMUSP00000096451	TRANSLATION	protein_coding	-	-	1	606	0	8.636	1.5	195.9	1	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032135	Mcam	ENSMUST00000147836	ENSMUSP00000117924	TRANSLATION	protein_coding	start/stop	-	2	149	0	1.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032015	Pou2f3	ENSMUST00000034513	ENSMUSP00000034513	TRANSLATION	protein_coding	-	-	1	419	0	3.8	1.7	193.8	0	-4,-5	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000032015	Pou2f3	ENSMUST00000176636	ENSMUSP00000135115	TRANSLATION	protein_coding	-	CCDS40596.1	1	431	0	3.8	3.9	193.8	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000032015	Pou2f3	ENSMUST00000213862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031870	Pgr	ENSMUST00000098986	ENSMUSP00000096584	TRANSLATION	protein_coding	-	-	1	761	28	7	0	886.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031870	Pgr	ENSMUST00000151080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031870	Pgr	ENSMUST00000070463	ENSMUSP00000063562	TRANSLATION	protein_coding	-	CCDS22816.1	1	926	28	7	1.5	1163.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031870	Pgr	ENSMUST00000189181	ENSMUSP00000140124	TRANSLATION	protein_coding	-	CCDS22816.1	1	926	28	7	1.5	1163.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019471	Cdc37	ENSMUST00000215866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019471	Cdc37	ENSMUST00000019615	ENSMUSP00000019615	TRANSLATION	protein_coding	-	CCDS22894.1	1	379	0	7.75	5.3	214.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019471	Cdc37	ENSMUST00000215296	ENSMUSP00000150265	TRANSLATION	protein_coding	stop	-	5	353	0	5.5	0	157.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032333	Stoml1	ENSMUST00000034883	ENSMUSP00000034883	TRANSLATION	protein_coding	-	CCDS23241.1	1	399	0	2.72	6.3	118.6	2	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000032333	Stoml1	ENSMUST00000215488	ENSMUSP00000150360	TRANSLATION	nonsense_mediated_decay	-	-	2	42	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000032333	Stoml1	ENSMUST00000216864	ENSMUSP00000150422	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032333	Stoml1	ENSMUST00000216877	ENSMUSP00000150531	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000032333	Stoml1	ENSMUST00000215079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032333	Stoml1	ENSMUST00000216187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032333	Stoml1	ENSMUST00000217026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032333	Stoml1	ENSMUST00000217165	ENSMUSP00000151093	TRANSLATION	nonsense_mediated_decay	-	-	2	44	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000110621	Olfr837	ENSMUST00000212482	ENSMUSP00000148520	TRANSLATION	protein_coding	-	CCDS85646.1	-	312	0	0.42	2.7	169.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000110621	Olfr837	ENSMUST00000215699	ENSMUSP00000149907	TRANSLATION	protein_coding	-	CCDS85646.1	5	312	0	0.42	2.7	169.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041440	Gk5	ENSMUST00000122383	ENSMUSP00000112717	TRANSLATION	protein_coding	-	CCDS52891.1	1	516	12	11.66	0.5	279.4	0	-4,-6	-	-	16.5	MINOR
ENSMUSG00000041440	Gk5	ENSMUST00000189249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041440	Gk5	ENSMUST00000129774	ENSMUSP00000123594	TRANSLATION	nonsense_mediated_decay	-	-	1	59	4	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041440	Gk5	ENSMUST00000085217	ENSMUSP00000082313	TRANSLATION	protein_coding	-	-	1	534	12	12.41	1.5	279.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000041440	Gk5	ENSMUST00000136496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066749	Olfr877	ENSMUST00000086063	ENSMUSP00000083230	TRANSLATION	protein_coding	-	CCDS22989.1	-	311	0	0.36	5.1	167.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000066749	Olfr877	ENSMUST00000213956	ENSMUSP00000150698	TRANSLATION	protein_coding	-	CCDS22989.1	5	311	0	0.36	5.1	167.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000074505	Fat3	ENSMUST00000082170	ENSMUSP00000080808	TRANSLATION	protein_coding	-	CCDS40539.1	5	4551	259	11.28	0.5	1552.4	0	4,-1	-	-	18	MINOR
ENSMUSG00000074505	Fat3	ENSMUST00000213517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074505	Fat3	ENSMUST00000215388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074505	Fat3	ENSMUST00000217187	ENSMUSP00000150638	TRANSLATION	protein_coding	start	-	3	404	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074505	Fat3	ENSMUST00000217308	ENSMUSP00000148968	TRANSLATION	protein_coding	-	-	5	4555	259	11.28	6.3	1552.4	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000023345	Poc1a	ENSMUST00000189325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023345	Poc1a	ENSMUST00000072206	ENSMUSP00000072064	TRANSLATION	protein_coding	-	CCDS23474.1	1	405	0	6.673	2.9	231.7	0	-4,-5	-	-	12.588	PRINCIPAL:2
ENSMUSG00000023345	Poc1a	ENSMUST00000216306	ENSMUSP00000149444	TRANSLATION	protein_coding	start	-	5	428	0	6.55	0	221.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023345	Poc1a	ENSMUST00000216228	ENSMUSP00000150549	TRANSLATION	protein_coding	-	-	5	367	0	6.075	3.4	197.2	0	-4,-2	-	-	9.532	MINOR
ENSMUSG00000023345	Poc1a	ENSMUST00000186366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023345	Poc1a	ENSMUST00000217213	ENSMUSP00000150865	TRANSLATION	protein_coding	-	-	5	367	0	6.075	3.4	197.2	0	-4,-2	-	-	9.532	MINOR
ENSMUSG00000023345	Poc1a	ENSMUST00000188660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023345	Poc1a	ENSMUST00000191434	ENSMUSP00000140374	TRANSLATION	protein_coding	-	-	1	356	0	6.514	2.4	231.7	0	-4,-5	-	-	12.061	ALTERNATIVE:2
ENSMUSG00000023345	Poc1a	ENSMUST00000214208	ENSMUSP00000149262	TRANSLATION	protein_coding	start	-	5	331	0	6.25	0	221.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023345	Poc1a	ENSMUST00000214483	ENSMUSP00000148880	TRANSLATION	protein_coding	start	-	5	394	0	6.775	0	221.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023345	Poc1a	ENSMUST00000214540	ENSMUSP00000149273	TRANSLATION	nonsense_mediated_decay	-	-	5	299	0	6.25	0	197.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032175	Tyk2	ENSMUST00000214615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032175	Tyk2	ENSMUST00000001036	ENSMUSP00000001036	TRANSLATION	protein_coding	-	CCDS57656.1	5	1207	4	22.025	0.5	442.8	0	-4,-6	-	-	15.25	PRINCIPAL:2
ENSMUSG00000032175	Tyk2	ENSMUST00000216874	ENSMUSP00000150354	TRANSLATION	protein_coding	-	CCDS57656.1	1	1207	4	22.025	0.5	442.8	0	-4,-6	-	-	15.25	PRINCIPAL:2
ENSMUSG00000032175	Tyk2	ENSMUST00000214454	ENSMUSP00000150214	TRANSLATION	protein_coding	-	-	1	1184	4	22.4	1.5	442.8	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000032175	Tyk2	ENSMUST00000213717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032175	Tyk2	ENSMUST00000214864	ENSMUSP00000151194	TRANSLATION	protein_coding	-	-	1	159	0	2.8	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000032374	Plod2	ENSMUST00000190075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032374	Plod2	ENSMUST00000161906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032374	Plod2	ENSMUST00000160359	ENSMUSP00000125373	TRANSLATION	protein_coding	-	CCDS52887.1	1	758	3	0	1.5	25.5	0	3,-1	-	-	9	ALTERNATIVE:2
ENSMUSG00000032374	Plod2	ENSMUST00000070522	ENSMUSP00000068611	TRANSLATION	protein_coding	-	CCDS23408.1	1	737	3	0	1.5	25.5	0	3,-1	-	-	9	PRINCIPAL:3
ENSMUSG00000032374	Plod2	ENSMUST00000160142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051243	Islr2	ENSMUST00000217427	ENSMUSP00000151098	TRANSLATION	protein_coding	stop	-	3	141	0	2.1	0	48.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000214647	ENSMUSP00000150118	TRANSLATION	protein_coding	stop	-	2	188	0	3.68	0	96.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000165276	ENSMUSP00000129328	TRANSLATION	protein_coding	-	CCDS23238.1	2	745	0	3.68	3.9	96.3	2	4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000051243	Islr2	ENSMUST00000170421	ENSMUSP00000127228	TRANSLATION	protein_coding	-	CCDS23238.1	3	745	0	3.68	3.9	96.3	2	4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000051243	Islr2	ENSMUST00000217512	ENSMUSP00000150877	TRANSLATION	protein_coding	stop	-	3	65	0	0.6	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000216231	ENSMUSP00000149680	TRANSLATION	protein_coding	stop	-	3	127	0	1.44	0	48.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000213495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051243	Islr2	ENSMUST00000217158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051243	Islr2	ENSMUST00000114144	ENSMUSP00000109781	TRANSLATION	protein_coding	-	CCDS23238.1	2	745	0	3.68	3.9	96.3	2	4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000051243	Islr2	ENSMUST00000217050	ENSMUSP00000149920	TRANSLATION	protein_coding	stop	-	3	179	0	3.35	0	91.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000216359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051243	Islr2	ENSMUST00000163897	ENSMUSP00000130322	TRANSLATION	protein_coding	-	CCDS23238.1	2	745	0	3.68	3.9	96.3	2	4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000051243	Islr2	ENSMUST00000163200	ENSMUSP00000130879	TRANSLATION	protein_coding	-	CCDS52812.1	1	789	0	3.68	0.5	96.3	2	-1,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000051243	Islr2	ENSMUST00000215950	ENSMUSP00000149095	TRANSLATION	protein_coding	-	CCDS23238.1	1	745	0	3.68	3.9	96.3	2	4,-1	-	-	13	PRINCIPAL:3
ENSMUSG00000051243	Islr2	ENSMUST00000214649	ENSMUSP00000149195	TRANSLATION	protein_coding	stop	-	2	133	0	1.44	0	48.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000216297	ENSMUSP00000151153	TRANSLATION	protein_coding	stop	-	2	154	0	2.6	0	48.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000051243	Islr2	ENSMUST00000213349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032502	Stac	ENSMUST00000162345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032502	Stac	ENSMUST00000161995	ENSMUSP00000125182	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032502	Stac	ENSMUST00000035083	ENSMUSP00000035083	TRANSLATION	protein_coding	-	CCDS23586.1	1	403	8	4.27	7.5	213.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056167	Cnot10	ENSMUST00000213539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056167	Cnot10	ENSMUST00000213955	ENSMUSP00000149867	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056167	Cnot10	ENSMUST00000215701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056167	Cnot10	ENSMUST00000217148	ENSMUSP00000148963	TRANSLATION	nonsense_mediated_decay	-	-	1	289	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056167	Cnot10	ENSMUST00000217296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056167	Cnot10	ENSMUST00000238809	ENSMUSP00000158898	TRANSLATION	protein_coding	stop	-	-	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056167	Cnot10	ENSMUST00000216785	ENSMUSP00000149024	TRANSLATION	protein_coding	-	-	5	409	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056167	Cnot10	ENSMUST00000070117	ENSMUSP00000064840	TRANSLATION	protein_coding	-	CCDS40794.1	1	744	0	0	9.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000056167	Cnot10	ENSMUST00000215155	ENSMUSP00000149745	TRANSLATION	nonsense_mediated_decay	-	-	1	405	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044860	Gm1123	ENSMUST00000076730	ENSMUSP00000076020	TRANSLATION	protein_coding	-	CCDS40737.1	1	390	0	3.92	1.5	197.3	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000032228	Tcf12	ENSMUST00000183992	ENSMUSP00000139084	TRANSLATION	protein_coding	stop	-	1	523	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184107	ENSMUSP00000139248	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000183492	ENSMUSP00000138939	TRANSLATION	protein_coding	stop	-	3	127	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184416	ENSMUSP00000139008	TRANSLATION	nonsense_mediated_decay	start	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184029	ENSMUSP00000138807	TRANSLATION	protein_coding	start	-	2	108	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032228	Tcf12	ENSMUST00000183918	ENSMUSP00000138978	TRANSLATION	protein_coding	-	CCDS72271.1	1	536	0	1.33	8.6	39.9	0	-4,-5	-	-	11.946	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000185117	ENSMUSP00000138925	TRANSLATION	protein_coding	-	CCDS72272.1	5	682	0	2.71	7.6	39.9	0	-4,-5	-	-	14.604	ALTERNATIVE:1
ENSMUSG00000032228	Tcf12	ENSMUST00000184448	ENSMUSP00000139334	TRANSLATION	protein_coding	stop	-	1	477	0	1.33	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000183784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032228	Tcf12	ENSMUST00000184783	ENSMUSP00000139364	TRANSLATION	protein_coding	-	CCDS23329.1	5	706	0	2.71	7.6	39.9	0	-4,-5	-	-	14.604	PRINCIPAL:3
ENSMUSG00000032228	Tcf12	ENSMUST00000184523	ENSMUSP00000138832	TRANSLATION	protein_coding	stop	-	5	666	0	2.71	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184378	ENSMUSP00000139268	TRANSLATION	nonsense_mediated_decay	start	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184867	ENSMUSP00000139233	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032228	Tcf12	ENSMUST00000184072	ENSMUSP00000139284	TRANSLATION	protein_coding	start/stop	-	5	279	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000183647	ENSMUSP00000139139	TRANSLATION	nonsense_mediated_decay	start	-	5	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032228	Tcf12	ENSMUST00000184770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032228	Tcf12	ENSMUST00000183404	ENSMUSP00000139365	TRANSLATION	protein_coding	-	CCDS23329.1	1	706	0	2.71	7.6	39.9	0	-4,-5	-	-	14.604	PRINCIPAL:3
ENSMUSG00000032228	Tcf12	ENSMUST00000034755	ENSMUSP00000034755	TRANSLATION	protein_coding	-	CCDS72272.1	5	682	0	2.71	7.6	39.9	0	-4,-5	-	-	14.604	ALTERNATIVE:1
ENSMUSG00000032228	Tcf12	ENSMUST00000183594	ENSMUSP00000138952	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	1.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079259	Trim71	ENSMUST00000111816	ENSMUSP00000107447	TRANSLATION	protein_coding	-	CCDS40793.1	1	855	13	0.92	1.5	306.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049281	Scn3b	ENSMUST00000176634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049281	Scn3b	ENSMUST00000176547	ENSMUSP00000135470	TRANSLATION	protein_coding	start	-	3	120	0	1	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000049281	Scn3b	ENSMUST00000176169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049281	Scn3b	ENSMUST00000176185	ENSMUSP00000135096	TRANSLATION	protein_coding	-	CCDS72214.1	1	175	0	2.75	1.5	65.3	3	-4,-5	-	-	9.702	MINOR
ENSMUSG00000049281	Scn3b	ENSMUST00000171835	ENSMUSP00000132933	TRANSLATION	protein_coding	-	CCDS23080.1	1	215	0	3.5	8.8	78.2	3	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000049281	Scn3b	ENSMUST00000216398	ENSMUSP00000149616	TRANSLATION	protein_coding	start	-	2	57	0	0	0	0	3	4,-1	-	-	-1	MINOR
ENSMUSG00000049281	Scn3b	ENSMUST00000175873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049281	Scn3b	ENSMUST00000049941	ENSMUSP00000051627	TRANSLATION	protein_coding	-	CCDS23080.1	1	215	0	3.5	8.8	78.2	3	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000049281	Scn3b	ENSMUST00000114956	ENSMUSP00000110606	TRANSLATION	protein_coding	-	CCDS23080.1	1	215	0	3.5	8.8	78.2	3	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000070313	Pate14	ENSMUST00000184901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070313	Pate14	ENSMUST00000184611	ENSMUSP00000139086	TRANSLATION	protein_coding	-	-	2	99	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000070313	Pate14	ENSMUST00000093868	ENSMUSP00000091391	TRANSLATION	protein_coding	-	CCDS22970.1	1	99	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000032114	Slc37a4	ENSMUST00000215001	ENSMUSP00000151004	TRANSLATION	protein_coding	stop	-	3	96	0	0.946	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032114	Slc37a4	ENSMUST00000213626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032114	Slc37a4	ENSMUST00000213388	ENSMUSP00000150843	TRANSLATION	protein_coding	-	CCDS23108.1	1	429	0	4.7	9.5	160.5	12	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032114	Slc37a4	ENSMUST00000215121	ENSMUSP00000150902	TRANSLATION	protein_coding	stop	-	5	102	0	1.65	0	44.8	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000032114	Slc37a4	ENSMUST00000213268	ENSMUSP00000150753	TRANSLATION	protein_coding	-	-	5	450	0	4.7	9.5	152.2	12	-4,-2	-	-	14.502	MINOR
ENSMUSG00000032114	Slc37a4	ENSMUST00000165839	ENSMUSP00000129564	TRANSLATION	protein_coding	-	CCDS23108.1	1	429	0	4.7	9.5	160.5	12	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032114	Slc37a4	ENSMUST00000215420	ENSMUSP00000148956	TRANSLATION	protein_coding	-	CCDS23108.1	1	429	0	4.7	9.5	160.5	12	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032481	Smarcc1	ENSMUST00000199896	ENSMUSP00000143550	TRANSLATION	protein_coding	-	-	1	1098	0	4.3	0	1008.8	0	-2,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000032481	Smarcc1	ENSMUST00000088716	ENSMUSP00000086094	TRANSLATION	protein_coding	-	CCDS23561.1	1	1104	0	4.3	0.5	1008.8	0	-2,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000032481	Smarcc1	ENSMUST00000198211	ENSMUSP00000143199	TRANSLATION	protein_coding	start	-	3	49	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032481	Smarcc1	ENSMUST00000198667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032481	Smarcc1	ENSMUST00000200237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032481	Smarcc1	ENSMUST00000098355	ENSMUSP00000095958	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032481	Smarcc1	ENSMUST00000197480	ENSMUSP00000142629	TRANSLATION	protein_coding	-	-	1	485	0	0.75	0	645.7	0	-2,-4	-	-	0	MINOR
ENSMUSG00000032481	Smarcc1	ENSMUST00000200426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032481	Smarcc1	ENSMUST00000197984	ENSMUSP00000142611	TRANSLATION	protein_coding	-	-	1	1075	0	4.3	0	1008.8	0	-2,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000035274	Tpbg	ENSMUST00000185559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035274	Tpbg	ENSMUST00000098500	ENSMUSP00000096101	TRANSLATION	protein_coding	-	CCDS23380.1	1	426	0	1	1.5	122.8	1	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000035274	Tpbg	ENSMUST00000006559	ENSMUSP00000006559	TRANSLATION	protein_coding	-	CCDS23380.1	1	426	0	1	1.5	122.8	1	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000074476	Spc24	ENSMUST00000213665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074476	Spc24	ENSMUST00000217382	ENSMUSP00000150475	TRANSLATION	protein_coding	-	-	1	137	0	0.132	1.2	0	0	-2,-5	-	-	0.363	MINOR
ENSMUSG00000074476	Spc24	ENSMUST00000216057	ENSMUSP00000151082	TRANSLATION	protein_coding	-	-	1	160	0	0.882	0	0	0	-2,-5	-	-	1.788	MINOR
ENSMUSG00000074476	Spc24	ENSMUST00000214149	ENSMUSP00000149956	TRANSLATION	protein_coding	stop	-	3	42	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074476	Spc24	ENSMUST00000098942	ENSMUSP00000096541	TRANSLATION	protein_coding	-	CCDS40554.1	1	201	0	2.962	7.5	62	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050730	Arhgap42	ENSMUST00000215397	ENSMUSP00000149949	TRANSLATION	protein_coding	stop	-	3	180	0	1.225	0	186	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050730	Arhgap42	ENSMUST00000182617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050730	Arhgap42	ENSMUST00000183182	ENSMUSP00000138500	TRANSLATION	protein_coding	-	-	1	139	0	1.18	0	100.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000050730	Arhgap42	ENSMUST00000093893	ENSMUSP00000091419	TRANSLATION	protein_coding	-	CCDS52720.1	1	841	0	11.155	0.5	319.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032012	Nectin1	ENSMUST00000216893	ENSMUSP00000149131	TRANSLATION	protein_coding	start	-	5	114	0	1.48	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032012	Nectin1	ENSMUST00000034510	ENSMUSP00000034510	TRANSLATION	protein_coding	-	CCDS23092.1	1	515	0	4.81	7.5	149.5	1	4,-2	-	-	14.982	PRINCIPAL:1
ENSMUSG00000032012	Nectin1	ENSMUST00000216905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032012	Nectin1	ENSMUST00000239313	ENSMUSP00000159280	TRANSLATION	protein_coding	-	-	-	447	0	4.57	0	149.8	1	4,-2	-	-	11.52	MINOR
ENSMUSG00000032012	Nectin1	ENSMUST00000180221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032346	Ooep	ENSMUST00000034900	ENSMUSP00000034900	TRANSLATION	protein_coding	-	CCDS23361.1	1	164	0	1	0.5	121.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095547	Gm10719	ENSMUST00000099049	ENSMUSP00000096648	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	0	2	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095547	Gm10719	ENSMUST00000179272	ENSMUSP00000136170	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	0	3	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095547	Gm10719	ENSMUST00000099047	ENSMUSP00000096646	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	3	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000044229	Nxpe4	ENSMUST00000093853	ENSMUSP00000091375	TRANSLATION	protein_coding	-	CCDS23152.1	5	543	0	0	1.5	75	0	-1,-6	-	-	5.934	PRINCIPAL:2
ENSMUSG00000044229	Nxpe4	ENSMUST00000216998	ENSMUSP00000149644	TRANSLATION	protein_coding	-	-	2	426	0	0	0	75.8	0	-1,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000044229	Nxpe4	ENSMUST00000215780	ENSMUSP00000149741	TRANSLATION	protein_coding	-	CCDS23152.1	1	543	0	0	1.5	75	0	-1,-6	-	-	5.934	PRINCIPAL:2
ENSMUSG00000044229	Nxpe4	ENSMUST00000217002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032368	Zic1	ENSMUST00000173121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032368	Zic1	ENSMUST00000034927	ENSMUSP00000034927	TRANSLATION	protein_coding	-	CCDS23403.1	1	447	21	1.6	11.6	67.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032368	Zic1	ENSMUST00000065360	ENSMUSP00000068858	TRANSLATION	protein_coding	-	CCDS23403.1	1	447	21	1.6	11.6	67.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031931	Ankrd49	ENSMUST00000034406	ENSMUSP00000034406	TRANSLATION	protein_coding	-	CCDS22826.1	1	238	0	0.8	6.3	68	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031931	Ankrd49	ENSMUST00000216372	ENSMUSP00000151079	TRANSLATION	protein_coding	-	CCDS22826.1	1	238	0	0.8	6.3	68	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031931	Ankrd49	ENSMUST00000214979	ENSMUSP00000150762	TRANSLATION	protein_coding	stop	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031931	Ankrd49	ENSMUST00000216037	ENSMUSP00000149874	TRANSLATION	protein_coding	-	CCDS22826.1	2	238	0	0.8	6.3	68	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031931	Ankrd49	ENSMUST00000214882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031931	Ankrd49	ENSMUST00000214456	ENSMUSP00000152731	TRANSLATION	protein_coding	-	-	1	120	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059189	Olfr913	ENSMUST00000081095	ENSMUSP00000079876	TRANSLATION	protein_coding	-	CCDS23018.1	3	312	0	0	6.4	164.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032306	Mpi	ENSMUST00000145543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032306	Mpi	ENSMUST00000034856	ENSMUSP00000034856	TRANSLATION	protein_coding	-	CCDS40650.1	1	423	16	5.5	4.1	474.2	0	-2,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000032306	Mpi	ENSMUST00000140671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032306	Mpi	ENSMUST00000124593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032306	Mpi	ENSMUST00000156428	ENSMUSP00000119342	TRANSLATION	nonsense_mediated_decay	start	-	5	122	2	2	0	144.9	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000033577	Myo6	ENSMUST00000156199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033577	Myo6	ENSMUST00000143804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033577	Myo6	ENSMUST00000183377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033577	Myo6	ENSMUST00000127779	ENSMUSP00000139228	TRANSLATION	protein_coding	-	-	5	1285	17	28.88	7.6	945.4	0	-4,-5	-	-	19.452	ALTERNATIVE:1
ENSMUSG00000033577	Myo6	ENSMUST00000035889	ENSMUSP00000036181	TRANSLATION	protein_coding	-	CCDS23368.1	5	1262	17	28.05	12.8	945.4	0	-4,-5	-	-	19.242	PRINCIPAL:2
ENSMUSG00000033577	Myo6	ENSMUST00000113266	ENSMUSP00000108891	TRANSLATION	protein_coding	-	-	5	1253	17	28.05	15.3	945.4	0	-4,-5	-	-	19.942	ALTERNATIVE:1
ENSMUSG00000033577	Myo6	ENSMUST00000139981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033577	Myo6	ENSMUST00000076140	ENSMUSP00000075501	TRANSLATION	protein_coding	-	-	5	1266	17	28.55	1.3	945.4	0	-4,-5	-	-	17.028	MINOR
ENSMUSG00000033577	Myo6	ENSMUST00000130496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033577	Myo6	ENSMUST00000184480	ENSMUSP00000139019	TRANSLATION	protein_coding	-	-	5	1294	17	29.078	7.5	945.4	0	-4,-5	-	-	19.82	ALTERNATIVE:1
ENSMUSG00000033577	Myo6	ENSMUST00000113268	ENSMUSP00000108893	TRANSLATION	protein_coding	-	-	5	1284	17	28.748	1.2	945.4	0	-4,-5	-	-	17.396	MINOR
ENSMUSG00000033577	Myo6	ENSMUST00000138650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094778	Olfr143	ENSMUST00000213129	ENSMUSP00000149842	TRANSLATION	protein_coding	-	-	5	310	0	0.2	5.1	166	6	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000094778	Olfr143	ENSMUST00000093865	ENSMUSP00000091388	TRANSLATION	protein_coding	-	CCDS23002.1	-	313	0	0.2	5.1	166	6	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000060594	Layn	ENSMUST00000214993	ENSMUSP00000149794	TRANSLATION	protein_coding	stop	-	2	122	3	0.42	0	36.9	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000060594	Layn	ENSMUST00000217212	ENSMUSP00000150681	TRANSLATION	protein_coding	-	-	1	320	10	1.164	0	60.2	1	-1,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000060594	Layn	ENSMUST00000214090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060594	Layn	ENSMUST00000098782	ENSMUSP00000096379	TRANSLATION	protein_coding	-	CCDS52791.1	5	381	10	1.164	2.9	60.2	1	-1,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000091735	Gpr62	ENSMUST00000164834	ENSMUSP00000129055	TRANSLATION	protein_coding	-	CCDS52909.1	-	358	0	0.36	1.5	57.2	0	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000032528	Vipr1	ENSMUST00000149959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032528	Vipr1	ENSMUST00000139189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032528	Vipr1	ENSMUST00000035115	ENSMUSP00000035115	TRANSLATION	protein_coding	-	CCDS23633.1	1	459	0	8.085	6.3	388.3	0	2,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000032528	Vipr1	ENSMUST00000129394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032528	Vipr1	ENSMUST00000213272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032348	Gsta4	ENSMUST00000034903	ENSMUSP00000034903	TRANSLATION	protein_coding	-	CCDS23357.1	1	222	10	5.75	7.9	136.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000032348	Gsta4	ENSMUST00000213215	ENSMUSP00000149763	TRANSLATION	protein_coding	stop	-	3	105	10	2.75	0	67.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031932	Gpr83	ENSMUST00000115624	ENSMUSP00000111287	TRANSLATION	protein_coding	-	CCDS80959.1	1	381	0	1.66	0.5	78.7	6	4,-1	-	-	4.128	MINOR
ENSMUSG00000031932	Gpr83	ENSMUST00000133278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031932	Gpr83	ENSMUST00000034408	ENSMUSP00000034408	TRANSLATION	protein_coding	-	CCDS22829.1	1	423	0	2.66	0.5	172.3	6	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032288	Imp3	ENSMUST00000034827	ENSMUSP00000034827	TRANSLATION	protein_coding	-	CCDS23213.1	-	184	0	1	15.5	65.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000110519	Olfr839-ps1	ENSMUST00000212127	ENSMUSP00000148782	TRANSLATION	protein_coding	-	-	5	312	0	0.2	1	176.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032280	Tle3	ENSMUST00000161993	ENSMUSP00000124432	TRANSLATION	protein_coding	stop	-	5	335	0	5.39	0	236.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000159630	ENSMUSP00000123723	TRANSLATION	protein_coding	-	-	1	712	0	9.61	1.2	162.7	0	-4,-5	-	-	2.416	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000162281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032280	Tle3	ENSMUST00000160724	ENSMUSP00000124055	TRANSLATION	protein_coding	stop	-	3	235	0	5.225	0	237.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000162127	ENSMUSP00000124150	TRANSLATION	protein_coding	start	-	5	702	0	9.115	1.2	145.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000161689	ENSMUSP00000125011	TRANSLATION	protein_coding	-	-	2	716	0	9.61	1.2	173.3	0	-4,-5	-	-	2.776	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000161194	ENSMUSP00000125537	TRANSLATION	protein_coding	stop	-	3	53	0	1.91	0	105.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000162962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032280	Tle3	ENSMUST00000159140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032280	Tle3	ENSMUST00000159386	ENSMUSP00000125049	TRANSLATION	protein_coding	-	-	5	760	0	11.44	2.4	267.3	0	-4,-7	-	-	12.528	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000162973	ENSMUSP00000124173	TRANSLATION	protein_coding	-	CCDS52825.1	5	772	0	11.44	6.3	267.3	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000032280	Tle3	ENSMUST00000034820	ENSMUSP00000034820	TRANSLATION	protein_coding	-	CCDS52824.1	1	764	0	11.44	6.3	267.3	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000032280	Tle3	ENSMUST00000178113	ENSMUSP00000136010	TRANSLATION	protein_coding	-	-	5	783	0	11.275	6.3	263.2	0	-4,-7	-	-	13.424	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000162583	ENSMUSP00000124977	TRANSLATION	protein_coding	-	-	5	769	0	11.44	6.3	267.3	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000032280	Tle3	ENSMUST00000159050	ENSMUSP00000125032	TRANSLATION	protein_coding	-	-	5	767	0	11.44	6.3	267.3	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000032280	Tle3	ENSMUST00000161207	ENSMUSP00000124557	TRANSLATION	protein_coding	-	-	5	762	0	11.11	1.2	261.2	0	-4,-5	-	-	11.05	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000160882	ENSMUSP00000124131	TRANSLATION	protein_coding	-	CCDS52826.1	1	782	0	11.275	6.3	263.2	0	-4,-7	-	-	13.424	MINOR
ENSMUSG00000032280	Tle3	ENSMUST00000160541	ENSMUSP00000124158	TRANSLATION	protein_coding	stop	-	3	81	0	2.91	0	144.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032470	Mras	ENSMUST00000147078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032470	Mras	ENSMUST00000123771	ENSMUSP00000121307	TRANSLATION	protein_coding	stop	-	5	130	21	2.5	0	136.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032470	Mras	ENSMUST00000131047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032470	Mras	ENSMUST00000122384	ENSMUSP00000113275	TRANSLATION	protein_coding	-	CCDS23433.1	1	208	24	4.11	21.5	178.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032470	Mras	ENSMUST00000119472	ENSMUSP00000112407	TRANSLATION	protein_coding	-	CCDS23433.1	1	208	24	4.11	21.5	178.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032470	Mras	ENSMUST00000035045	ENSMUSP00000035045	TRANSLATION	protein_coding	-	CCDS23433.1	1	208	24	4.11	21.5	178.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059183	Mtfmt	ENSMUST00000130057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059183	Mtfmt	ENSMUST00000132966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059183	Mtfmt	ENSMUST00000140244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059183	Mtfmt	ENSMUST00000074792	ENSMUSP00000074347	TRANSLATION	protein_coding	-	CCDS23292.1	1	386	3	4.275	1.5	135	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000032285	Dnaja4	ENSMUST00000120452	ENSMUSP00000112520	TRANSLATION	protein_coding	-	CCDS23193.1	1	397	8	6.53	7.3	299.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032285	Dnaja4	ENSMUST00000070070	ENSMUSP00000070413	TRANSLATION	protein_coding	-	CCDS23193.1	1	397	8	6.53	7.3	299.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032285	Dnaja4	ENSMUST00000154690	ENSMUSP00000119602	TRANSLATION	protein_coding	stop	-	5	207	8	3.8	0	152.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038412	Higd1a	ENSMUST00000213147	ENSMUSP00000150962	TRANSLATION	protein_coding	stop	-	3	84	0	2.566	0	66	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000038412	Higd1a	ENSMUST00000215007	ENSMUSP00000150629	TRANSLATION	protein_coding	-	-	1	99	0	2.566	0	66	3	-4,-5	-	-	11.13	MINOR
ENSMUSG00000038412	Higd1a	ENSMUST00000215300	ENSMUSP00000150726	TRANSLATION	protein_coding	-	CCDS40812.1	3	95	0	3	8.8	66	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038412	Higd1a	ENSMUST00000213124	ENSMUSP00000149531	TRANSLATION	protein_coding	-	CCDS40812.1	5	95	0	3	8.8	66	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038412	Higd1a	ENSMUST00000214988	ENSMUSP00000149331	TRANSLATION	protein_coding	stop	-	3	63	0	2	0	34.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000038412	Higd1a	ENSMUST00000216914	ENSMUSP00000150189	TRANSLATION	protein_coding	stop	-	3	76	0	2.5	0	63	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000038412	Higd1a	ENSMUST00000060251	ENSMUSP00000054881	TRANSLATION	protein_coding	-	CCDS40812.1	1	95	0	3	8.8	66	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032265	Tent5a	ENSMUST00000187711	ENSMUSP00000140869	TRANSLATION	protein_coding	-	CCDS81046.1	1	428	4	0	2.7	527.6	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000032265	Tent5a	ENSMUST00000034802	ENSMUSP00000034802	TRANSLATION	protein_coding	-	CCDS52875.1	3	447	4	0	2.7	527.6	0	-4,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000032305	Fam219b	ENSMUST00000215897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032305	Fam219b	ENSMUST00000114200	ENSMUSP00000109838	TRANSLATION	protein_coding	-	CCDS52807.1	1	197	0	0	3.9	199.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000032305	Fam219b	ENSMUST00000093833	ENSMUSP00000091353	TRANSLATION	protein_coding	-	CCDS52808.1	1	128	0	0	1.5	65.9	0	-4,-5	-	-	0.172	MINOR
ENSMUSG00000056271	Lman1l	ENSMUST00000093832	ENSMUSP00000091352	TRANSLATION	protein_coding	-	CCDS52810.1	1	505	0	5.35	0.5	172.5	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056271	Lman1l	ENSMUST00000044937	ENSMUSP00000041631	TRANSLATION	nonsense_mediated_decay	-	-	2	374	0	5.35	0	172.5	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032013	Trim29	ENSMUST00000217418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032013	Trim29	ENSMUST00000217067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032013	Trim29	ENSMUST00000034511	ENSMUSP00000034511	TRANSLATION	protein_coding	-	CCDS52775.1	1	587	15	1.74	7.5	39.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031969	Acad8	ENSMUST00000129490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031969	Acad8	ENSMUST00000120367	ENSMUSP00000112908	TRANSLATION	protein_coding	-	-	5	413	30	9.93	3.9	333.6	0	-4,0	-	-	19	ALTERNATIVE:2
ENSMUSG00000031969	Acad8	ENSMUST00000132293	ENSMUSP00000123012	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0.6	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031969	Acad8	ENSMUST00000128923	ENSMUSP00000122444	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.6	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000031969	Acad8	ENSMUST00000215693	ENSMUSP00000150728	TRANSLATION	nonsense_mediated_decay	start	-	5	66	0	1.35	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031969	Acad8	ENSMUST00000060513	ENSMUSP00000054370	TRANSLATION	protein_coding	-	CCDS40567.1	1	413	30	9.93	3.9	332.5	0	-4,0	-	-	18.934	PRINCIPAL:2
ENSMUSG00000031969	Acad8	ENSMUST00000138102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031969	Acad8	ENSMUST00000151075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048752	Prss50	ENSMUST00000196027	ENSMUSP00000143092	TRANSLATION	protein_coding	start	-	3	221	2	1.83	0	80	0	1,-2	-	-	-1	MINOR
ENSMUSG00000048752	Prss50	ENSMUST00000051097	ENSMUSP00000059668	TRANSLATION	protein_coding	-	CCDS23577.1	1	439	2	3.95	0.5	165.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032020	Ubash3b	ENSMUST00000151485	ENSMUSP00000116038	TRANSLATION	protein_coding	-	-	1	516	11	8.4	0.5	61.5	0	-4,-5	-	-	11.616	MINOR
ENSMUSG00000032020	Ubash3b	ENSMUST00000129906	ENSMUSP00000134923	TRANSLATION	protein_coding	stop	-	3	93	0	0.5	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032020	Ubash3b	ENSMUST00000136530	ENSMUSP00000114176	TRANSLATION	protein_coding	stop	-	3	116	0	1.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032020	Ubash3b	ENSMUST00000044155	ENSMUSP00000043865	TRANSLATION	protein_coding	-	CCDS23085.1	1	638	12	10.3	2.8	90.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032020	Ubash3b	ENSMUST00000124819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032020	Ubash3b	ENSMUST00000132996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032297	Celf6	ENSMUST00000143916	ENSMUSP00000118556	TRANSLATION	nonsense_mediated_decay	-	-	5	182	0	3.316	0	79.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032297	Celf6	ENSMUST00000129728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032297	Celf6	ENSMUST00000118549	ENSMUSP00000112755	TRANSLATION	protein_coding	-	-	5	481	0	6.91	6.3	173	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032297	Celf6	ENSMUST00000146503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032297	Celf6	ENSMUST00000118164	ENSMUSP00000112403	TRANSLATION	protein_coding	-	CCDS81012.1	1	344	0	5.13	2.9	118.2	0	-4,-5	-	-	5.87	MINOR
ENSMUSG00000032297	Celf6	ENSMUST00000034840	ENSMUSP00000034840	TRANSLATION	protein_coding	-	CCDS23251.1	1	460	0	6.91	1.5	173	0	-4,-7	-	-	12.188	MINOR
ENSMUSG00000032297	Celf6	ENSMUST00000121266	ENSMUSP00000113196	TRANSLATION	protein_coding	-	-	1	345	0	5.16	2.9	118.2	0	-4,-5	-	-	5.93	MINOR
ENSMUSG00000032297	Celf6	ENSMUST00000129357	ENSMUSP00000122167	TRANSLATION	nonsense_mediated_decay	-	-	5	162	0	1.95	0	57.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032332	Col12a1	ENSMUST00000122827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032332	Col12a1	ENSMUST00000141667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032332	Col12a1	ENSMUST00000150289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032332	Col12a1	ENSMUST00000071750	ENSMUSP00000071662	TRANSLATION	protein_coding	-	CCDS72284.1	5	3065	21	32.66	3.9	1669.2	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000032332	Col12a1	ENSMUST00000135009	ENSMUSP00000123455	TRANSLATION	protein_coding	start	-	5	314	0	4.425	0	68	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032332	Col12a1	ENSMUST00000121227	ENSMUSP00000112604	TRANSLATION	protein_coding	-	-	5	3064	21	32.66	0	1666.2	0	4,-1	-	-	17.82	MINOR
ENSMUSG00000032051	Fdx1	ENSMUST00000214013	ENSMUSP00000150434	TRANSLATION	protein_coding	-	-	1	166	12	2.3	0.5	24	0	-4,0	-	-	15.42	MINOR
ENSMUSG00000032051	Fdx1	ENSMUST00000034552	ENSMUSP00000034552	TRANSLATION	protein_coding	-	CCDS23178.1	1	188	12	3	1.5	29.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032051	Fdx1	ENSMUST00000214486	ENSMUSP00000150644	TRANSLATION	nonsense_mediated_decay	start	-	3	59	11	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000214325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032299	Commd4	ENSMUST00000214174	ENSMUSP00000150460	TRANSLATION	nonsense_mediated_decay	start	-	2	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000213161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032299	Commd4	ENSMUST00000214097	ENSMUSP00000149534	TRANSLATION	protein_coding	start/stop	-	3	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000215013	ENSMUSP00000149657	TRANSLATION	protein_coding	start/stop	-	3	164	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000213580	ENSMUSP00000150129	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000214640	ENSMUSP00000151102	TRANSLATION	protein_coding	start	-	3	180	0	0	3.9	57.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000065358	ENSMUSP00000069078	TRANSLATION	protein_coding	-	CCDS40647.1	1	199	0	0	8.8	57.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032299	Commd4	ENSMUST00000215500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032299	Commd4	ENSMUST00000217018	ENSMUSP00000149502	TRANSLATION	protein_coding	start/stop	-	3	129	0	0	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032299	Commd4	ENSMUST00000216031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032299	Commd4	ENSMUST00000214072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032299	Commd4	ENSMUST00000214212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032440	Tgfbr2	ENSMUST00000061101	ENSMUSP00000062333	TRANSLATION	protein_coding	-	CCDS23601.1	1	592	13	6	3.9	264.3	1	0,-4	-	-	19.094	PRINCIPAL:4
ENSMUSG00000032440	Tgfbr2	ENSMUST00000035014	ENSMUSP00000035014	TRANSLATION	protein_coding	-	CCDS23602.1	1	567	13	6	6.3	264.3	1	0,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000032053	Pou2af1	ENSMUST00000214322	ENSMUSP00000149529	TRANSLATION	protein_coding	start	-	3	150	0	0	0	229.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032053	Pou2af1	ENSMUST00000034554	ENSMUSP00000034554	TRANSLATION	protein_coding	-	CCDS23176.1	1	256	0	1.33	6.3	465.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038264	Sema7a	ENSMUST00000043059	ENSMUSP00000042211	TRANSLATION	protein_coding	-	CCDS23235.1	1	664	0	12.45	2.7	342.7	0	-1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000038264	Sema7a	ENSMUST00000214314	ENSMUSP00000148893	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	0.6	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000090150	Acad11	ENSMUST00000047799	ENSMUSP00000043424	TRANSLATION	protein_coding	-	CCDS23458.1	1	779	32	17.66	1.5	380.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090150	Acad11	ENSMUST00000128714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090150	Acad11	ENSMUST00000189133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090150	Acad11	ENSMUST00000189998	ENSMUSP00000141064	TRANSLATION	protein_coding	-	-	5	541	9	11.41	0	193.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090150	Acad11	ENSMUST00000120854	ENSMUSP00000112994	TRANSLATION	protein_coding	-	-	5	661	32	15.3	1.2	323.3	0	-4,-7	-	-	9.822	MINOR
ENSMUSG00000090150	Acad11	ENSMUST00000185819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090150	Acad11	ENSMUST00000154431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090150	Acad11	ENSMUST00000216220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041009	Iqcf4	ENSMUST00000085111	ENSMUSP00000082192	TRANSLATION	protein_coding	-	CCDS23482.1	1	204	0	0.4	0.5	50.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041268	Dmxl2	ENSMUST00000154092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041268	Dmxl2	ENSMUST00000118163	ENSMUSP00000113705	TRANSLATION	protein_coding	-	CCDS52799.1	5	3054	0	3.49	1.5	284.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000041268	Dmxl2	ENSMUST00000149709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041268	Dmxl2	ENSMUST00000144736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041268	Dmxl2	ENSMUST00000127880	ENSMUSP00000122293	TRANSLATION	protein_coding	stop	-	1	1310	0	0	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041268	Dmxl2	ENSMUST00000118600	ENSMUSP00000113693	TRANSLATION	protein_coding	-	-	5	3032	0	3.49	1.5	284.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041268	Dmxl2	ENSMUST00000123709	ENSMUSP00000119959	TRANSLATION	protein_coding	start	-	5	2235	0	3.49	0	284.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041268	Dmxl2	ENSMUST00000128865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001943	Vsig2	ENSMUST00000215957	ENSMUSP00000149703	TRANSLATION	protein_coding	-	-	1	235	0	2.37	0	66.6	2	2,-2	-	-	4.38	MINOR
ENSMUSG00000001943	Vsig2	ENSMUST00000002008	ENSMUSP00000002008	TRANSLATION	protein_coding	-	CCDS22980.1	1	328	0	4.17	3.9	133.6	2	2,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000001943	Vsig2	ENSMUST00000215271	ENSMUSP00000150115	TRANSLATION	protein_coding	-	-	1	248	0	3.05	0	67	2	1,-3	-	-	5.766	MINOR
ENSMUSG00000001943	Vsig2	ENSMUST00000213699	ENSMUSP00000149098	TRANSLATION	protein_coding	start	-	2	91	0	1	0	24.7	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000001943	Vsig2	ENSMUST00000213502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001943	Vsig2	ENSMUST00000215710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091956	C2cd4b	ENSMUST00000171652	ENSMUSP00000131138	TRANSLATION	protein_coding	-	CCDS40675.1	1	340	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000035047	Kri1	ENSMUST00000184326	ENSMUSP00000139184	TRANSLATION	protein_coding	-	-	5	587	0	0	0	193.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000035047	Kri1	ENSMUST00000183912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035047	Kri1	ENSMUST00000183503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035047	Kri1	ENSMUST00000184410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035047	Kri1	ENSMUST00000184615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035047	Kri1	ENSMUST00000183665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035047	Kri1	ENSMUST00000038671	ENSMUSP00000039688	TRANSLATION	protein_coding	-	CCDS72201.1	1	705	0	0	0.5	193.5	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000059741	Myl3	ENSMUST00000136695	ENSMUSP00000142791	TRANSLATION	protein_coding	-	-	3	127	4	3.16	0	0	0	-4,-5	-	-	8.638	MINOR
ENSMUSG00000059741	Myl3	ENSMUST00000079784	ENSMUSP00000078715	TRANSLATION	protein_coding	-	CCDS23571.1	1	204	4	3.84	0.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000059741	Myl3	ENSMUST00000124267	ENSMUSP00000142424	TRANSLATION	protein_coding	-	-	5	127	4	3.16	0	0	0	-4,-5	-	-	8.638	MINOR
ENSMUSG00000059741	Myl3	ENSMUST00000200011	ENSMUSP00000142530	TRANSLATION	protein_coding	stop	-	5	184	4	3.18	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059741	Myl3	ENSMUST00000153142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032044	Rpusd4	ENSMUST00000034543	ENSMUSP00000034543	TRANSLATION	protein_coding	-	CCDS22962.1	1	377	2	7	1.5	118.6	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000032044	Rpusd4	ENSMUST00000144582	ENSMUSP00000120327	TRANSLATION	nonsense_mediated_decay	start	-	3	35	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032044	Rpusd4	ENSMUST00000146571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032044	Rpusd4	ENSMUST00000130552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093901	Olfr893	ENSMUST00000211975	ENSMUSP00000148719	TRANSLATION	protein_coding	-	-	5	310	0	0.62	3.9	154.6	5	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000093901	Olfr893	ENSMUST00000093867	ENSMUSP00000091390	TRANSLATION	protein_coding	-	CCDS23000.1	-	312	0	0.62	3.9	154.6	5	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000093901	Olfr893	ENSMUST00000212815	ENSMUSP00000148828	TRANSLATION	protein_coding	start	-	5	164	0	0.42	0	74.5	1	-2,-4	-	-	-1	MINOR
ENSMUSG00000044037	Als2cl	ENSMUST00000143416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044037	Als2cl	ENSMUST00000141845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044037	Als2cl	ENSMUST00000200613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044037	Als2cl	ENSMUST00000155014	ENSMUSP00000115718	TRANSLATION	protein_coding	-	CCDS23579.1	1	952	0	0	5.1	138.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000044037	Als2cl	ENSMUST00000084926	ENSMUSP00000081989	TRANSLATION	protein_coding	-	CCDS23579.1	1	952	0	0	5.1	138.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000044037	Als2cl	ENSMUST00000156673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044037	Als2cl	ENSMUST00000123389	ENSMUSP00000142853	TRANSLATION	protein_coding	stop	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044037	Als2cl	ENSMUST00000130386	ENSMUSP00000123304	TRANSLATION	protein_coding	-	CCDS23579.1	1	952	0	0	5.1	138.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000064039	Ccr1l1	ENSMUST00000071404	ENSMUSP00000071353	TRANSLATION	protein_coding	-	CCDS23667.1	-	356	0	0.8	1.5	139.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004098	Col5a3	ENSMUST00000145974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004098	Col5a3	ENSMUST00000004201	ENSMUSP00000004201	TRANSLATION	protein_coding	-	CCDS22883.1	1	1739	5	23.51	1.5	346.7	0	3,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000070280	Slc22a14	ENSMUST00000093775	ENSMUSP00000091289	TRANSLATION	protein_coding	-	CCDS23609.1	1	629	0	3.74	0.5	94	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070280	Slc22a14	ENSMUST00000152061	ENSMUSP00000117967	TRANSLATION	protein_coding	start/stop	-	3	196	0	0.36	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000070280	Slc22a14	ENSMUST00000170400	ENSMUSP00000131982	TRANSLATION	protein_coding	-	CCDS23609.1	5	629	0	3.74	0.5	94	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070280	Slc22a14	ENSMUST00000127794	ENSMUSP00000120144	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094353	Olfr150	ENSMUST00000078557	ENSMUSP00000077635	TRANSLATION	protein_coding	-	CCDS52773.1	-	312	0	0.2	4	167	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000094353	Olfr150	ENSMUST00000217257	ENSMUSP00000150024	TRANSLATION	protein_coding	-	CCDS52773.1	5	312	0	0.2	4	167	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000054360	Bsx	ENSMUST00000067375	ENSMUSP00000068057	TRANSLATION	protein_coding	-	CCDS23084.1	1	232	0	1.4	8.8	76.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032281	Acsbg1	ENSMUST00000128163	ENSMUSP00000119551	TRANSLATION	protein_coding	stop	-	2	110	0	0.48	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032281	Acsbg1	ENSMUST00000138315	ENSMUSP00000118133	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032281	Acsbg1	ENSMUST00000128624	ENSMUSP00000121622	TRANSLATION	protein_coding	stop	-	3	127	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032281	Acsbg1	ENSMUST00000034822	ENSMUSP00000034822	TRANSLATION	protein_coding	-	CCDS23192.1	1	721	21	6.97	1.5	329.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032281	Acsbg1	ENSMUST00000132914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010205	Raver1	ENSMUST00000115487	ENSMUSP00000111150	TRANSLATION	protein_coding,RT	-	CCDS40550.1	1	748	0	3.95	1.5	74.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000063225	Olfr917	ENSMUST00000076542	ENSMUSP00000075857	TRANSLATION	protein_coding	-	CCDS23021.1	-	309	0	0.36	5.1	143.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059495	Arhgef12	ENSMUST00000214175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059495	Arhgef12	ENSMUST00000217502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059495	Arhgef12	ENSMUST00000215898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059495	Arhgef12	ENSMUST00000072767	ENSMUSP00000072547	TRANSLATION	protein_coding	-	-	1	1543	0	18.8148	6.5	462	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000059495	Arhgef12	ENSMUST00000213566	ENSMUSP00000150833	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	2.73	0	46.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059495	Arhgef12	ENSMUST00000165665	ENSMUSP00000126598	TRANSLATION	protein_coding	-	CCDS40595.1	1	1544	0	18.8148	6.5	462	0	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000031991	Spata19	ENSMUST00000214287	ENSMUSP00000149525	TRANSLATION	protein_coding	-	-	1	119	0	0	0.5	212.5	0	-4,-5	-	-	3.654	MINOR
ENSMUSG00000031991	Spata19	ENSMUST00000214158	ENSMUSP00000149139	TRANSLATION	protein_coding	-	-	5	97	0	0	0	186.8	0	-4,-5	-	-	2.112	MINOR
ENSMUSG00000031991	Spata19	ENSMUST00000215658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031991	Spata19	ENSMUST00000214240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031991	Spata19	ENSMUST00000215326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031991	Spata19	ENSMUST00000034473	ENSMUSP00000034473	TRANSLATION	protein_coding	-	CCDS22941.1	1	154	0	0	1.5	251.6	0	-3,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032002	Dcun1d5	ENSMUST00000215818	ENSMUSP00000150049	TRANSLATION	protein_coding	start	-	3	147	0	2.4	0	79.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032002	Dcun1d5	ENSMUST00000215683	ENSMUSP00000150564	TRANSLATION	protein_coding	-	CCDS40529.1	1	237	0	4.9	8.8	105.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032002	Dcun1d5	ENSMUST00000216770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032002	Dcun1d5	ENSMUST00000034499	ENSMUSP00000034499	TRANSLATION	protein_coding	-	-	1	255	0	3.55	0.5	42.2	0	-4,-7	-	-	5.526	MINOR
ENSMUSG00000079084	Ccdc82	ENSMUST00000110583	ENSMUSP00000106212	TRANSLATION	protein_coding	-	CCDS57651.1	1	518	0	0	1.5	266.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079084	Ccdc82	ENSMUST00000216578	ENSMUSP00000151057	TRANSLATION	protein_coding	stop	-	-	161	0	0	0	67	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079084	Ccdc82	ENSMUST00000215735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079084	Ccdc82	ENSMUST00000215778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079084	Ccdc82	ENSMUST00000217444	ENSMUSP00000150947	TRANSLATION	protein_coding	-	CCDS57651.1	1	518	0	0	1.5	266.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079084	Ccdc82	ENSMUST00000169961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056267	Cep70	ENSMUST00000188515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056267	Cep70	ENSMUST00000187883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056267	Cep70	ENSMUST00000191335	ENSMUSP00000139816	TRANSLATION	protein_coding	-	-	1	578	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000056267	Cep70	ENSMUST00000191014	ENSMUSP00000139896	TRANSLATION	nonsense_mediated_decay	-	-	3	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056267	Cep70	ENSMUST00000093795	ENSMUSP00000091312	TRANSLATION	protein_coding	-	CCDS40738.1	1	616	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000056267	Cep70	ENSMUST00000190715	ENSMUSP00000140377	TRANSLATION	protein_coding	-	-	1	179	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000056267	Cep70	ENSMUST00000190078	ENSMUSP00000141041	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056267	Cep70	ENSMUST00000185799	ENSMUSP00000139458	TRANSLATION	protein_coding	stop	-	1	160	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056267	Cep70	ENSMUST00000189371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040813	Tex264	ENSMUST00000191205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000169068	ENSMUSP00000133194	TRANSLATION	protein_coding	-	CCDS23483.1	1	309	0	0	1.5	0	0	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000040813	Tex264	ENSMUST00000046735	ENSMUSP00000044654	TRANSLATION	protein_coding	-	CCDS23483.1	1	309	0	0	1.5	0	0	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000040813	Tex264	ENSMUST00000185257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000185645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000214885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000163441	ENSMUSP00000132247	TRANSLATION	protein_coding	-	CCDS23483.1	1	309	0	0	1.5	0	0	0,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000040813	Tex264	ENSMUST00000190948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000188120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040813	Tex264	ENSMUST00000188892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009828	Cilk1	ENSMUST00000009972	ENSMUSP00000009972	TRANSLATION	protein_coding	-	-	1	100	0	0	0	0	0	-3,-1	-	-	0	MINOR
ENSMUSG00000009828	Cilk1	ENSMUST00000044551	ENSMUSP00000048234	TRANSLATION	protein_coding	-	CCDS40697.1	1	629	20	4.92	1.5	267.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000009828	Cilk1	ENSMUST00000117330	ENSMUSP00000113655	TRANSLATION	protein_coding	-	-	2	539	20	4.92	0	267.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000009828	Cilk1	ENSMUST00000125615	ENSMUSP00000115522	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009828	Cilk1	ENSMUST00000142402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009828	Cilk1	ENSMUST00000118869	ENSMUSP00000112961	TRANSLATION	protein_coding	-	CCDS40697.1	1	629	20	4.92	1.5	267.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000009828	Cilk1	ENSMUST00000149821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009828	Cilk1	ENSMUST00000142776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094745	Olfr954	ENSMUST00000080329	ENSMUSP00000079205	TRANSLATION	protein_coding	-	CCDS23046.1	-	314	0	0.28	4	176.4	6	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000094745	Olfr954	ENSMUST00000214818	ENSMUSP00000151116	TRANSLATION	protein_coding	-	-	5	311	0	0.28	2.8	176.4	6	-4,-5	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000044791	Setd2	ENSMUST00000198823	ENSMUSP00000142553	TRANSLATION	protein_coding	start/stop	-	3	238	20	5.25	0	54.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044791	Setd2	ENSMUST00000197260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044791	Setd2	ENSMUST00000197655	ENSMUSP00000142933	TRANSLATION	nonsense_mediated_decay	start	-	5	169	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044791	Setd2	ENSMUST00000197399	ENSMUSP00000142572	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	2	0	49.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044791	Setd2	ENSMUST00000196814	ENSMUSP00000143774	TRANSLATION	nonsense_mediated_decay	start	-	5	1263	10	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044791	Setd2	ENSMUST00000198697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044791	Setd2	ENSMUST00000200460	ENSMUSP00000142960	TRANSLATION	protein_coding	start	-	1	760	0	5.25	0	145.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044791	Setd2	ENSMUST00000198587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044791	Setd2	ENSMUST00000195911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044791	Setd2	ENSMUST00000153838	ENSMUSP00000116313	TRANSLATION	protein_coding	-	CCDS40781.2	5	2537	27	12	0.5	212.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058515	Olfr933	ENSMUST00000216238	ENSMUSP00000149292	TRANSLATION	protein_coding	-	CCDS23033.1	2	308	0	0.2	8.8	170.9	4	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058515	Olfr933	ENSMUST00000075680	ENSMUSP00000075102	TRANSLATION	protein_coding	-	CCDS23033.1	-	308	0	0.2	8.8	170.9	4	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034303	Ccdc15	ENSMUST00000216060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034303	Ccdc15	ENSMUST00000239439	ENSMUSP00000159312	TRANSLATION	protein_coding	-	-	-	810	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000034303	Ccdc15	ENSMUST00000037275	ENSMUSP00000036784	TRANSLATION	protein_coding	-	CCDS40584.1	1	823	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000034303	Ccdc15	ENSMUST00000217238	ENSMUSP00000149429	TRANSLATION	protein_coding	-	-	1	189	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000034303	Ccdc15	ENSMUST00000213633	ENSMUSP00000150207	TRANSLATION	protein_coding	-	-	5	810	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000034303	Ccdc15	ENSMUST00000215116	ENSMUSP00000149806	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034303	Ccdc15	ENSMUST00000216042	ENSMUSP00000150095	TRANSLATION	protein_coding	-	-	1	189	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000032384	Csnk1g1	ENSMUST00000124688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032384	Csnk1g1	ENSMUST00000208011	ENSMUSP00000146513	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	1.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000153391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032384	Csnk1g1	ENSMUST00000205489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032384	Csnk1g1	ENSMUST00000205379	ENSMUSP00000145724	TRANSLATION	protein_coding	-	-	5	422	0	8.39	8.8	154.2	0	-4,-5	-	-	11.028	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000207167	ENSMUSP00000146845	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000205884	ENSMUSP00000146026	TRANSLATION	nonsense_mediated_decay	start	-	5	164	0	3.83	0	27.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000117849	ENSMUSP00000113160	TRANSLATION	protein_coding	-	-	1	430	0	8.39	5.2	154.2	0	-4,-5	-	-	9.642	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000154589	ENSMUSP00000119407	TRANSLATION	protein_coding	stop	-	3	42	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000146069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032384	Csnk1g1	ENSMUST00000034949	ENSMUSP00000034949	TRANSLATION	protein_coding	-	CCDS23300.1	1	459	0	8.79	7.6	207.1	0	-4,-5	-	-	14.538	PRINCIPAL:1
ENSMUSG00000032384	Csnk1g1	ENSMUST00000206594	ENSMUSP00000145947	TRANSLATION	protein_coding	-	CCDS23300.1	5	459	0	8.79	7.6	207.1	0	-4,-5	-	-	14.538	PRINCIPAL:1
ENSMUSG00000032384	Csnk1g1	ENSMUST00000206969	ENSMUSP00000146283	TRANSLATION	protein_coding	start	-	3	204	0	3.15	0	113.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000206048	ENSMUSP00000145887	TRANSLATION	protein_coding	-	-	5	461	0	8.79	0	207.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000130798	ENSMUSP00000145938	TRANSLATION	protein_coding	-	-	5	390	0	8.39	1.5	121.1	0	-4,-5	-	-	6.234	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000206528	ENSMUSP00000146047	TRANSLATION	protein_coding	-	-	5	424	0	8.39	0	154.2	0	-4,-5	-	-	8.028	MINOR
ENSMUSG00000032384	Csnk1g1	ENSMUST00000136773	ENSMUSP00000145744	TRANSLATION	protein_coding	start	-	5	141	0	2.4	0	66.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025239	Limd1	ENSMUST00000214309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025239	Limd1	ENSMUST00000213278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025239	Limd1	ENSMUST00000216352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025239	Limd1	ENSMUST00000026269	ENSMUSP00000026269	TRANSLATION	protein_coding	-	CCDS23660.1	1	668	23	4.63	0.5	126.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025239	Limd1	ENSMUST00000217639	ENSMUSP00000150888	TRANSLATION	protein_coding	start/stop	-	5	72	8	1.4	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050721	Plekho2	ENSMUST00000068944	ENSMUSP00000063677	TRANSLATION	protein_coding	-	CCDS23294.1	1	495	11	1.8	1.5	44.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050721	Plekho2	ENSMUST00000213554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050721	Plekho2	ENSMUST00000214740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050721	Plekho2	ENSMUST00000213652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025645	Ccdc51	ENSMUST00000026735	ENSMUSP00000026735	TRANSLATION	protein_coding	-	CCDS52931.1	1	406	0	0	3.9	0	0	-4,-1	-	-	1	PRINCIPAL:1
ENSMUSG00000037949	Ano10	ENSMUST00000216670	ENSMUSP00000150161	TRANSLATION	protein_coding	-	-	1	612	0	5.136	0	386.2	11	-4,-5	-	-	7.944	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000214507	ENSMUSP00000151030	TRANSLATION	protein_coding	start	-	1	478	0	5.136	0	418.8	11	-4,-6	-	-	-1	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000216081	ENSMUSP00000149278	TRANSLATION	nonsense_mediated_decay	-	-	2	176	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000217606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037949	Ano10	ENSMUST00000214409	ENSMUSP00000151189	TRANSLATION	protein_coding	-	-	1	601	0	5.626	0.5	351.7	7	-4,-5	-	-	6.852	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000214283	ENSMUSP00000149772	TRANSLATION	nonsense_mediated_decay	-	-	1	498	0	2.894	0	250	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000216738	ENSMUSP00000149488	TRANSLATION	protein_coding	start	-	2	100	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037949	Ano10	ENSMUST00000042546	ENSMUSP00000045214	TRANSLATION	protein_coding	-	CCDS23645.1	1	659	0	6.186	6.5	418.8	11	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032816	Igdcc4	ENSMUST00000035499	ENSMUSP00000045387	TRANSLATION	protein_coding	-	CCDS72258.1	1	1253	0	11.36	0.5	374.9	2	3,-1	-	-	11.79	PRINCIPAL:2
ENSMUSG00000032816	Igdcc4	ENSMUST00000077696	ENSMUSP00000076878	TRANSLATION	protein_coding	-	-	5	1299	0	11.464	0	296.9	2	3,-1	-	-	7.32	MINOR
ENSMUSG00000032816	Igdcc4	ENSMUST00000213533	ENSMUSP00000150272	TRANSLATION	protein_coding	-	-	1	1252	0	11.36	0.5	373.2	2	3,-1	-	-	11.688	ALTERNATIVE:2
ENSMUSG00000032816	Igdcc4	ENSMUST00000213423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032816	Igdcc4	ENSMUST00000216542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032816	Igdcc4	ENSMUST00000166273	ENSMUSP00000132576	TRANSLATION	protein_coding	-	-	1	241	0	0.42	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000032816	Igdcc4	ENSMUST00000214978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042688	Mapk6	ENSMUST00000049355	ENSMUSP00000040315	TRANSLATION	protein_coding	-	CCDS23342.1	1	720	17	4	14.8	233.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042688	Mapk6	ENSMUST00000172665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042688	Mapk6	ENSMUST00000174034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042688	Mapk6	ENSMUST00000173230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042688	Mapk6	ENSMUST00000173460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042688	Mapk6	ENSMUST00000172946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042688	Mapk6	ENSMUST00000168937	ENSMUSP00000129024	TRANSLATION	protein_coding	-	CCDS23342.1	5	720	17	4	14.8	233.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000064333	Olfr926	ENSMUST00000078289	ENSMUSP00000077405	TRANSLATION	protein_coding	-	CCDS23031.1	-	308	0	0.2	2.7	179.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000090710	Pate11	ENSMUST00000165591	ENSMUSP00000129404	TRANSLATION	protein_coding	-	CCDS52765.1	1	99	0	0	1.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000032006	Pdgfd	ENSMUST00000168039	ENSMUSP00000128388	TRANSLATION	protein_coding	-	CCDS22801.1	1	370	3	1.355	7.5	141.5	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000032006	Pdgfd	ENSMUST00000214892	ENSMUSP00000149162	TRANSLATION	protein_coding	-	-	1	261	3	1.355	0.5	79.5	0	1,-2	-	-	11.28	MINOR
ENSMUSG00000032006	Pdgfd	ENSMUST00000058692	ENSMUSP00000056240	TRANSLATION	protein_coding	-	-	1	364	3	1.355	5.3	141.5	0	1,-2	-	-	16.986	ALTERNATIVE:1
ENSMUSG00000037493	Cib2	ENSMUST00000041901	ENSMUSP00000038527	TRANSLATION	protein_coding	-	CCDS40642.1	1	187	9	3.83	19.5	39.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032413	Rasa2	ENSMUST00000188853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032413	Rasa2	ENSMUST00000144376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032413	Rasa2	ENSMUST00000034984	ENSMUSP00000034984	TRANSLATION	protein_coding	-	CCDS23416.1	1	847	15	10.26	0.5	322.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032413	Rasa2	ENSMUST00000185435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032413	Rasa2	ENSMUST00000128346	ENSMUSP00000115629	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032413	Rasa2	ENSMUST00000190537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047409	Ctdspl	ENSMUST00000174841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047409	Ctdspl	ENSMUST00000073109	ENSMUSP00000072852	TRANSLATION	protein_coding	-	CCDS23605.1	1	276	10	4.83	8.8	181	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000047409	Ctdspl	ENSMUST00000174132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047409	Ctdspl	ENSMUST00000172464	ENSMUSP00000133755	TRANSLATION	protein_coding	-	-	5	265	10	4.5	7.6	181	0	-4,-5	-	-	19.878	MINOR
ENSMUSG00000047036	Zfp445	ENSMUST00000213971	ENSMUSP00000149985	TRANSLATION	protein_coding	start/stop	-	2	252	0	0.8	0	76.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047036	Zfp445	ENSMUST00000214558	ENSMUSP00000150362	TRANSLATION	protein_coding	stop	-	5	111	0	0.8	0	89.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047036	Zfp445	ENSMUST00000216721	ENSMUSP00000150435	TRANSLATION	protein_coding	stop	-	2	119	0	1.13	0	101.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047036	Zfp445	ENSMUST00000056467	ENSMUSP00000055738	TRANSLATION	protein_coding	-	CCDS23648.1	1	986	35	2.67	0.5	348.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000047036	Zfp445	ENSMUST00000216063	ENSMUSP00000151198	TRANSLATION	protein_coding	-	CCDS23648.1	1	986	35	2.67	0.5	348.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000047036	Zfp445	ENSMUST00000214162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047036	Zfp445	ENSMUST00000214626	ENSMUSP00000148942	TRANSLATION	protein_coding	-	-	5	303	0	2.53	0	197.9	0	-4,-7	-	-	5.688	MINOR
ENSMUSG00000047036	Zfp445	ENSMUST00000216243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000195623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000194290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000193923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000193552	ENSMUSP00000142102	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064145	Arih2	ENSMUST00000195741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000192853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064145	Arih2	ENSMUST00000193190	ENSMUSP00000141914	TRANSLATION	nonsense_mediated_decay	-	-	5	318	19	4.957	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064145	Arih2	ENSMUST00000013338	ENSMUSP00000013338	TRANSLATION	protein_coding	-	CCDS23534.1	1	492	25	9.024	6.3	81.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000064145	Arih2	ENSMUST00000193643	ENSMUSP00000141369	TRANSLATION	nonsense_mediated_decay	-	-	3	110	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064145	Arih2	ENSMUST00000193197	ENSMUSP00000141911	TRANSLATION	protein_coding	stop	-	5	79	9	2.1	0	29.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000064145	Arih2	ENSMUST00000194073	ENSMUSP00000141364	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000064145	Arih2	ENSMUST00000192686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032215	Rsl24d1	ENSMUST00000034738	ENSMUSP00000034738	TRANSLATION	protein_coding	-	CCDS40688.1	1	163	4	1.68	17.5	115.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032215	Rsl24d1	ENSMUST00000165177	ENSMUSP00000126553	TRANSLATION	protein_coding	-	-	3	164	3	0.93	0	58.8	0	-4,-7	-	-	8.934	MINOR
ENSMUSG00000032215	Rsl24d1	ENSMUST00000113505	ENSMUSP00000109133	TRANSLATION	nonsense_mediated_decay	-	-	3	40	2	0.75	0	49.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032215	Rsl24d1	ENSMUST00000169399	ENSMUSP00000129528	TRANSLATION	protein_coding	-	-	3	71	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032103	Pus3	ENSMUST00000121246	ENSMUSP00000113382	TRANSLATION	protein_coding	-	-	1	316	1	0.72	0	86.9	0	-4,-5	-	-	10.902	MINOR
ENSMUSG00000032103	Pus3	ENSMUST00000034615	ENSMUSP00000034615	TRANSLATION	protein_coding	-	CCDS22965.1	1	481	1	0.72	1.5	105.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032103	Pus3	ENSMUST00000135768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032563	Mrpl3	ENSMUST00000139022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032563	Mrpl3	ENSMUST00000131655	ENSMUSP00000120313	TRANSLATION	nonsense_mediated_decay	-	-	5	156	0	5.24	0	49.1	0	-2,2	-	-	-1	MINOR
ENSMUSG00000032563	Mrpl3	ENSMUST00000035177	ENSMUSP00000035177	TRANSLATION	protein_coding	-	CCDS23462.1	1	348	0	10.49	6.3	203.2	0	-2,2	-	-	14	PRINCIPAL:1
ENSMUSG00000032563	Mrpl3	ENSMUST00000142424	ENSMUSP00000120828	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	1	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000032563	Mrpl3	ENSMUST00000190492	ENSMUSP00000140346	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	1.198	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000032563	Mrpl3	ENSMUST00000214036	ENSMUSP00000150592	TRANSLATION	protein_coding	stop	-	5	137	0	4.58	0	41.5	0	-2,1	-	-	-1	MINOR
ENSMUSG00000032563	Mrpl3	ENSMUST00000149243	ENSMUSP00000117547	TRANSLATION	protein_coding	-	-	1	304	0	9.82	0	170.5	0	-2,2	-	-	8.7	MINOR
ENSMUSG00000032563	Mrpl3	ENSMUST00000214459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032563	Mrpl3	ENSMUST00000215577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043895	S1pr2	ENSMUST00000214218	ENSMUSP00000150113	TRANSLATION	protein_coding	stop	-	3	16	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043895	S1pr2	ENSMUST00000214333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043895	S1pr2	ENSMUST00000054197	ENSMUSP00000053394	TRANSLATION	protein_coding	-	CCDS22888.1	1	352	0	1	6.3	101.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000043895	S1pr2	ENSMUST00000216499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057969	Sema3b	ENSMUST00000123926	ENSMUSP00000137952	TRANSLATION	nonsense_mediated_decay	-	-	1	534	0	11.358	0	516	0	1,-3	-	-	-1	MINOR
ENSMUSG00000057969	Sema3b	ENSMUST00000195472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057969	Sema3b	ENSMUST00000194433	ENSMUSP00000141403	TRANSLATION	protein_coding	stop	-	2	172	0	4.028	0	116.4	0	1,-3	-	-	-1	MINOR
ENSMUSG00000057969	Sema3b	ENSMUST00000102529	ENSMUSP00000099588	TRANSLATION	protein_coding	-	CCDS23501.1	1	749	0	14.558	3.9	540.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000057969	Sema3b	ENSMUST00000193180	ENSMUSP00000141726	TRANSLATION	protein_coding	stop	-	3	147	0	3.278	0	103.7	0	1,-3	-	-	-1	MINOR
ENSMUSG00000057969	Sema3b	ENSMUST00000102530	ENSMUSP00000099589	TRANSLATION	protein_coding	-	CCDS23501.1	5	749	0	14.558	3.9	540.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000057969	Sema3b	ENSMUST00000193234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057969	Sema3b	ENSMUST00000073448	ENSMUSP00000073152	TRANSLATION	protein_coding	-	CCDS23501.1	1	749	0	14.558	3.9	540.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000057969	Sema3b	ENSMUST00000102531	ENSMUSP00000099590	TRANSLATION	protein_coding	-	CCDS23501.1	1	749	0	14.558	3.9	540.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000057969	Sema3b	ENSMUST00000193551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057969	Sema3b	ENSMUST00000195662	ENSMUSP00000141614	TRANSLATION	protein_coding	stop	-	3	137	0	2.948	0	90.5	0	1,-3	-	-	-1	MINOR
ENSMUSG00000057969	Sema3b	ENSMUST00000102532	ENSMUSP00000099591	TRANSLATION	protein_coding	-	CCDS23501.1	1	749	0	14.558	3.9	540.6	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000057969	Sema3b	ENSMUST00000195057	ENSMUSP00000141390	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057969	Sema3b	ENSMUST00000194606	ENSMUSP00000141928	TRANSLATION	protein_coding	stop	-	3	48	0	0.648	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000032936	Camkv	ENSMUST00000192318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032936	Camkv	ENSMUST00000195219	ENSMUSP00000142005	TRANSLATION	protein_coding	stop	-	3	48	0	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032936	Camkv	ENSMUST00000194206	ENSMUSP00000141444	TRANSLATION	protein_coding	-	-	5	484	3	6.75	0	110	0	-4,-5	-	-	7.512	MINOR
ENSMUSG00000032936	Camkv	ENSMUST00000193533	ENSMUSP00000141347	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032936	Camkv	ENSMUST00000035700	ENSMUSP00000040430	TRANSLATION	protein_coding	-	CCDS40763.1	1	512	3	7.5	0.5	209.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032458	Copb2	ENSMUST00000188913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032458	Copb2	ENSMUST00000186657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032458	Copb2	ENSMUST00000189395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032458	Copb2	ENSMUST00000187336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032458	Copb2	ENSMUST00000187151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032458	Copb2	ENSMUST00000035033	ENSMUSP00000035033	TRANSLATION	protein_coding	-	CCDS40734.1	1	905	0	20.25	7.5	683.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032127	Vps11	ENSMUST00000213740	ENSMUSP00000148911	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032127	Vps11	ENSMUST00000216089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032127	Vps11	ENSMUST00000214460	ENSMUSP00000150989	TRANSLATION	protein_coding	start/stop	-	3	249	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032127	Vps11	ENSMUST00000034644	ENSMUSP00000034644	TRANSLATION	protein_coding	-	CCDS40599.1	1	941	8	0	7.5	147.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032127	Vps11	ENSMUST00000214510	ENSMUSP00000149457	TRANSLATION	nonsense_mediated_decay	-	-	1	407	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032127	Vps11	ENSMUST00000213249	ENSMUSP00000150333	TRANSLATION	nonsense_mediated_decay	start	-	2	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032606	Nicn1	ENSMUST00000192035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032606	Nicn1	ENSMUST00000195695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032606	Nicn1	ENSMUST00000035227	ENSMUSP00000035227	TRANSLATION	protein_coding	-	CCDS40767.1	1	213	0	0	7.5	0	0	-4,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000032606	Nicn1	ENSMUST00000194496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001349	Cnn1	ENSMUST00000214601	ENSMUSP00000149628	TRANSLATION	protein_coding	-	-	1	238	0	3.79	0	176.7	0	-4,-6	-	-	7.932	MINOR
ENSMUSG00000001349	Cnn1	ENSMUST00000213607	ENSMUSP00000149514	TRANSLATION	protein_coding	stop	-	5	82	0	2.25	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001349	Cnn1	ENSMUST00000216141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001349	Cnn1	ENSMUST00000216872	ENSMUSP00000150665	TRANSLATION	protein_coding	stop	-	2	233	0	2.89	0	227.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001349	Cnn1	ENSMUST00000001384	ENSMUSP00000001384	TRANSLATION	protein_coding	-	CCDS22921.1	1	297	0	3.79	7.6	244.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000105589	Fbxw14	ENSMUST00000198928	ENSMUSP00000142991	TRANSLATION	protein_coding	stop	-	3	76	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000105589	Fbxw14	ENSMUST00000112041	ENSMUSP00000107672	TRANSLATION	protein_coding	-	CCDS81079.1	1	413	0	2.0786	0.5	41.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000105589	Fbxw14	ENSMUST00000198048	ENSMUSP00000143127	TRANSLATION	protein_coding	start	-	5	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000105589	Fbxw14	ENSMUST00000198844	ENSMUSP00000143404	TRANSLATION	protein_coding	-	CCDS23550.1	1	466	0	2.0786	0.5	41.7	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000032411	Tfdp2	ENSMUST00000188829	ENSMUSP00000140359	TRANSLATION	protein_coding	stop	-	3	112	0	1.5	0	33.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000190709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032411	Tfdp2	ENSMUST00000165120	ENSMUSP00000132934	TRANSLATION	protein_coding	-	CCDS52893.1	1	310	0	5.25	1.7	286.8	0	-4,-5	-	-	10.286	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000165768	ENSMUSP00000128260	TRANSLATION	protein_coding	-	CCDS57690.1	1	386	0	5.75	6.5	302.9	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000032411	Tfdp2	ENSMUST00000034982	ENSMUSP00000034982	TRANSLATION	protein_coding	-	CCDS23413.1	1	385	0	5.75	5.3	300.6	0	-4,-6	-	-	13.426	PRINCIPAL:3
ENSMUSG00000032411	Tfdp2	ENSMUST00000188008	ENSMUSP00000139848	TRANSLATION	protein_coding	stop	-	5	368	0	5.75	0.5	302.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000188750	ENSMUSP00000139926	TRANSLATION	protein_coding	-	-	5	446	0	5.75	5.3	300.6	0	-4,-6	-	-	13.426	ALTERNATIVE:1
ENSMUSG00000032411	Tfdp2	ENSMUST00000189606	ENSMUSP00000141084	TRANSLATION	protein_coding	stop	-	5	369	0	5.75	0.5	302.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000191133	ENSMUSP00000139395	TRANSLATION	protein_coding	start	-	2	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000179416	ENSMUSP00000137176	TRANSLATION	protein_coding	-	CCDS23413.1	1	385	0	5.75	5.3	300.6	0	-4,-6	-	-	13.426	PRINCIPAL:3
ENSMUSG00000032411	Tfdp2	ENSMUST00000179065	ENSMUSP00000136817	TRANSLATION	protein_coding	-	CCDS52892.1	1	359	0	5.75	0.5	300.6	0	-4,-5	-	-	11.862	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000191390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032411	Tfdp2	ENSMUST00000185644	ENSMUSP00000140061	TRANSLATION	protein_coding	-	CCDS23413.1	1	385	0	5.75	5.3	300.6	0	-4,-6	-	-	13.426	PRINCIPAL:3
ENSMUSG00000032411	Tfdp2	ENSMUST00000186609	ENSMUSP00000139891	TRANSLATION	protein_coding	stop	-	5	203	0	4.75	0	253.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032411	Tfdp2	ENSMUST00000190689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032411	Tfdp2	ENSMUST00000190104	ENSMUSP00000140797	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052182	Olfr849	ENSMUST00000217273	ENSMUSP00000149769	TRANSLATION	protein_coding	-	CCDS22857.1	5	312	0	0.42	2.7	173.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052182	Olfr849	ENSMUST00000063923	ENSMUSP00000064123	TRANSLATION	protein_coding	-	CCDS22857.1	-	312	0	0.42	2.7	173.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044798	Olfr923	ENSMUST00000051238	ENSMUSP00000062073	TRANSLATION	protein_coding	-	-	-	311	0	0.2	5.1	157.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044798	Olfr923	ENSMUST00000213619	ENSMUSP00000151135	TRANSLATION	protein_coding	-	-	5	311	0	0.2	5.1	157.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044798	Olfr923	ENSMUST00000219798	ENSMUSP00000151652	TRANSLATION	protein_coding	-	CCDS23028.1	-	317	0	0.2	1.5	157.9	5	-4,-6	-	-	12.244	MINOR
ENSMUSG00000044798	Olfr923	ENSMUST00000213550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039585	Myo9a	ENSMUST00000136740	ENSMUSP00000122852	TRANSLATION	protein_coding	-	CCDS52820.1	5	2631	15	16.51	0.5	1025.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000039585	Myo9a	ENSMUST00000151167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039585	Myo9a	ENSMUST00000127933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039585	Myo9a	ENSMUST00000128341	ENSMUSP00000119401	TRANSLATION	protein_coding	-	-	5	2542	15	16.51	0.5	1025.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039585	Myo9a	ENSMUST00000147364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039585	Myo9a	ENSMUST00000126631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039585	Myo9a	ENSMUST00000135298	ENSMUSP00000117432	TRANSLATION	protein_coding	-	-	5	2613	15	16.51	0.5	1025.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000039585	Myo9a	ENSMUST00000130497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058270	Olfr25	ENSMUST00000212354	ENSMUSP00000148761	TRANSLATION	protein_coding	-	-	-	310	0	0.2	5.1	156.5	8	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000058270	Olfr25	ENSMUST00000214155	ENSMUSP00000150567	TRANSLATION	protein_coding	-	-	5	310	0	0.2	5.1	156.5	8	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000058270	Olfr25	ENSMUST00000071449	ENSMUSP00000071393	TRANSLATION	protein_coding	-	CCDS23004.1	-	313	0	0.2	5.1	156.5	8	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000079243	Xirp1	ENSMUST00000111635	ENSMUSP00000107262	TRANSLATION	protein_coding	-	CCDS52966.1	1	1132	0	0	0.5	288	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000079243	Xirp1	ENSMUST00000238557	ENSMUSP00000158836	TRANSLATION	protein_coding	-	-	-	1813	0	0	0	288	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079243	Xirp1	ENSMUST00000213113	ENSMUSP00000149083	TRANSLATION	protein_coding	start	-	5	77	0	0	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023259	Slc26a6	ENSMUST00000193463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023259	Slc26a6	ENSMUST00000098376	ENSMUSP00000095979	TRANSLATION	protein_coding	stop	-	5	735	0	6.275	0	365.5	9	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000023259	Slc26a6	ENSMUST00000192559	ENSMUSP00000141632	TRANSLATION	nonsense_mediated_decay	-	-	1	239	0	1.62	0	146.7	3	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000023259	Slc26a6	ENSMUST00000188557	ENSMUSP00000140849	TRANSLATION	protein_coding	stop	-	1	628	0	6.275	0	365.5	9	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000023259	Slc26a6	ENSMUST00000192507	ENSMUSP00000141336	TRANSLATION	protein_coding	stop	-	1	628	0	6.275	0	365.5	9	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000023259	Slc26a6	ENSMUST00000193825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023259	Slc26a6	ENSMUST00000193874	ENSMUSP00000141409	TRANSLATION	nonsense_mediated_decay	-	-	5	239	0	1.62	0	146.7	3	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000023259	Slc26a6	ENSMUST00000195646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023259	Slc26a6	ENSMUST00000193291	ENSMUSP00000142250	TRANSLATION	protein_coding	stop	-	1	628	0	6.275	0	365.5	9	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000023259	Slc26a6	ENSMUST00000191404	ENSMUSP00000140982	TRANSLATION	protein_coding	start	-	2	50	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000032194	Kank2	ENSMUST00000034717	ENSMUSP00000034717	TRANSLATION	protein_coding	-	CCDS22911.1	1	843	0	5.6	0.5	150	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032194	Kank2	ENSMUST00000216008	ENSMUSP00000151181	TRANSLATION	nonsense_mediated_decay	-	-	1	607	0	0	0	79.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032194	Kank2	ENSMUST00000213691	ENSMUSP00000150735	TRANSLATION	protein_coding	stop	-	5	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032042	Srpr	ENSMUST00000034541	ENSMUSP00000034541	TRANSLATION	protein_coding	-	CCDS22959.1	1	636	9	14.55	5.1	415	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032042	Srpr	ENSMUST00000154005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032042	Srpr	ENSMUST00000138287	ENSMUSP00000149923	TRANSLATION	protein_coding	stop	-	3	144	0	3	0	54.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032042	Srpr	ENSMUST00000132799	ENSMUSP00000115104	TRANSLATION	protein_coding	start	-	3	153	1	3.45	0	71.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006235	Epor	ENSMUST00000213181	ENSMUSP00000149402	TRANSLATION	protein_coding	stop	-	2	111	0	2.5	0	54.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006235	Epor	ENSMUST00000006397	ENSMUSP00000006397	TRANSLATION	protein_coding	-	CCDS22915.1	1	507	0	7	5.1	124.8	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000032295	Man2c1	ENSMUST00000159496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000160584	ENSMUSP00000123840	TRANSLATION	nonsense_mediated_decay	-	-	5	208	0	2.623	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000161393	ENSMUSP00000125277	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000159402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000159130	ENSMUSP00000125549	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0.564	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000162340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000162634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000161182	ENSMUSP00000124020	TRANSLATION	protein_coding	-	-	5	940	2	15.086	0	584.7	0	-4,-7	-	-	5.996	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000160426	ENSMUSP00000124005	TRANSLATION	nonsense_mediated_decay	start	-	5	138	1	0.76	0	33.2	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000159711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000159843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000160042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000159954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000034836	ENSMUSP00000034836	TRANSLATION	protein_coding	-	-	5	1037	5	16.946	2.9	638.6	0	-4,-7	-	-	15.95	ALTERNATIVE:2
ENSMUSG00000032295	Man2c1	ENSMUST00000162915	ENSMUSP00000125186	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0.3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000161663	ENSMUSP00000124124	TRANSLATION	protein_coding	stop	-	1	866	5	13.096	0	436.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000161338	ENSMUSP00000124378	TRANSLATION	nonsense_mediated_decay	start	-	3	20	2	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000160122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032295	Man2c1	ENSMUST00000161696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000160147	ENSMUSP00000125478	TRANSLATION	protein_coding	-	CCDS40646.1	1	1039	5	16.946	2.9	656.1	0	-4,-7	-	-	17	PRINCIPAL:2
ENSMUSG00000032295	Man2c1	ENSMUST00000159101	ENSMUSP00000124304	TRANSLATION	nonsense_mediated_decay	start	-	3	190	1	2.56	0	99.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032295	Man2c1	ENSMUST00000160280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032295	Man2c1	ENSMUST00000161875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001948	Spa17	ENSMUST00000215336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001948	Spa17	ENSMUST00000214786	ENSMUSP00000150651	TRANSLATION	protein_coding	stop	-	3	130	0	0.8	0	77.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001948	Spa17	ENSMUST00000002013	ENSMUSP00000002013	TRANSLATION	protein_coding	-	CCDS22982.1	1	149	0	0.8	1.5	78.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062270	Morf4l1	ENSMUST00000190377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062270	Morf4l1	ENSMUST00000185433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062270	Morf4l1	ENSMUST00000189089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062270	Morf4l1	ENSMUST00000085248	ENSMUSP00000082346	TRANSLATION	protein_coding	-	CCDS23400.1	1	362	0	8.428	7.6	219.1	0	-4,-5	-	-	12.242	MINOR
ENSMUSG00000062270	Morf4l1	ENSMUST00000191353	ENSMUSP00000140023	TRANSLATION	protein_coding	stop	-	3	172	0	3.448	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062270	Morf4l1	ENSMUST00000190345	ENSMUSP00000141091	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062270	Morf4l1	ENSMUST00000188905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062270	Morf4l1	ENSMUST00000187771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062270	Morf4l1	ENSMUST00000189420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062270	Morf4l1	ENSMUST00000191189	ENSMUSP00000140118	TRANSLATION	protein_coding	-	-	5	296	0	7.198	1.2	243.8	0	-4,-5	-	-	9.592	MINOR
ENSMUSG00000062270	Morf4l1	ENSMUST00000169860	ENSMUSP00000132020	TRANSLATION	protein_coding	-	CCDS52885.1	1	323	0	7.828	16.3	243.8	0	-4,-5	-	-	14.8	PRINCIPAL:1
ENSMUSG00000062270	Morf4l1	ENSMUST00000189241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059547	Fbxw26	ENSMUST00000071917	ENSMUSP00000071811	TRANSLATION	protein_coding	-	CCDS40776.1	1	466	0	2.14	0.5	41.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033629	Hacd3	ENSMUST00000036615	ENSMUSP00000044955	TRANSLATION	protein_coding	-	CCDS23284.1	1	362	0	1.98	7.5	149.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000066235	Pomgnt2	ENSMUST00000084743	ENSMUSP00000095868	TRANSLATION	protein_coding	-	CCDS23643.1	1	580	0	0	5.1	0	0	0,-3	-	-	2	PRINCIPAL:1
ENSMUSG00000066235	Pomgnt2	ENSMUST00000215084	ENSMUSP00000149999	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000066235	Pomgnt2	ENSMUST00000215008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066235	Pomgnt2	ENSMUST00000216669	ENSMUSP00000149077	TRANSLATION	protein_coding	-	CCDS23643.1	1	580	0	0	5.1	0	0	0,-3	-	-	2	PRINCIPAL:1
ENSMUSG00000066235	Pomgnt2	ENSMUST00000217610	ENSMUSP00000149753	TRANSLATION	protein_coding	-	CCDS23643.1	1	580	0	0	5.1	0	0	0,-3	-	-	2	PRINCIPAL:1
ENSMUSG00000066235	Pomgnt2	ENSMUST00000214511	ENSMUSP00000151099	TRANSLATION	protein_coding	stop	-	5	154	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000066235	Pomgnt2	ENSMUST00000214533	ENSMUSP00000150975	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000053820	Bcl2a1c	ENSMUST00000066460	ENSMUSP00000063842	TRANSLATION	protein_coding	-	CCDS23591.1	-	128	0	1	0.5	53	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032334	Loxl1	ENSMUST00000061799	ENSMUSP00000057406	TRANSLATION	protein_coding	-	CCDS52813.1	1	607	0	0	1.5	315.5	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000049556	Lingo1	ENSMUST00000209596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049556	Lingo1	ENSMUST00000210995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049556	Lingo1	ENSMUST00000209332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049556	Lingo1	ENSMUST00000114247	ENSMUSP00000109885	TRANSLATION	protein_coding	-	CCDS23209.1	1	614	0	1	14.8	174.6	1	2,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000049556	Lingo1	ENSMUST00000210332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049556	Lingo1	ENSMUST00000114256	ENSMUSP00000109894	TRANSLATION	protein_coding	-	CCDS81004.1	1	620	0	1	12.8	174.6	1	0,-2	-	-	15.42	ALTERNATIVE:1
ENSMUSG00000049556	Lingo1	ENSMUST00000053568	ENSMUSP00000059050	TRANSLATION	protein_coding	-	CCDS23209.1	1	614	0	1	14.8	174.6	1	2,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000049556	Lingo1	ENSMUST00000210032	ENSMUSP00000148179	TRANSLATION	protein_coding	-	CCDS23209.1	5	614	0	1	14.8	174.6	1	2,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000032475	Nck1	ENSMUST00000116522	ENSMUSP00000112221	TRANSLATION	protein_coding	-	CCDS23440.1	1	377	0	4.8	11	237.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032475	Nck1	ENSMUST00000112874	ENSMUSP00000108495	TRANSLATION	protein_coding	-	CCDS85715.1	1	313	0	3.8	10	185.5	0	-4,-5	-	-	9.564	MINOR
ENSMUSG00000032475	Nck1	ENSMUST00000188670	ENSMUSP00000140143	TRANSLATION	protein_coding	stop	-	3	132	0	2	0	52.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032475	Nck1	ENSMUST00000186591	ENSMUSP00000140971	TRANSLATION	protein_coding	stop	-	2	206	0	3	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029530	Ccr9	ENSMUST00000163559	ENSMUSP00000131782	TRANSLATION	protein_coding	-	CCDS23662.1	1	369	0	1	6.3	156.2	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029530	Ccr9	ENSMUST00000215921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000029530	Ccr9	ENSMUST00000180093	ENSMUSP00000137144	TRANSLATION	protein_coding	-	CCDS23662.1	1	369	0	1	6.3	156.2	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029530	Ccr9	ENSMUST00000166236	ENSMUSP00000127024	TRANSLATION	protein_coding	-	CCDS23662.1	1	369	0	1	6.3	156.2	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029530	Ccr9	ENSMUST00000168910	ENSMUSP00000126758	TRANSLATION	protein_coding	-	CCDS23662.1	1	369	0	1	6.3	156.2	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000029530	Ccr9	ENSMUST00000111454	ENSMUSP00000107081	TRANSLATION	protein_coding	-	-	5	357	0	1	2.4	156.2	5	-4,-6	-	-	12.528	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000216379	ENSMUSP00000150869	TRANSLATION	protein_coding	stop	-	5	149	0	4.33	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000213201	ENSMUSP00000148973	TRANSLATION	nonsense_mediated_decay	start	-	3	141	0	2.248	0	37.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000185874	ENSMUSP00000141057	TRANSLATION	protein_coding	stop	-	2	119	0	3.34	0	56.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000024260	ENSMUSP00000024260	TRANSLATION	protein_coding	-	CCDS23479.1	1	403	0	7.918	7.5	183.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023495	Pcbp4	ENSMUST00000187975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023495	Pcbp4	ENSMUST00000190799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023495	Pcbp4	ENSMUST00000188448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023495	Pcbp4	ENSMUST00000190428	ENSMUSP00000139587	TRANSLATION	protein_coding	start	-	2	168	0	3.918	0	67.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000185854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023495	Pcbp4	ENSMUST00000185779	ENSMUSP00000140629	TRANSLATION	protein_coding	stop	-	5	197	0	5.288	0	116.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000215656	ENSMUSP00000149560	TRANSLATION	protein_coding	stop	-	5	158	0	4.288	0	87.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000185831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023495	Pcbp4	ENSMUST00000213156	ENSMUSP00000149109	TRANSLATION	protein_coding	start	-	2	222	0	4.728	0	123.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000186519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023495	Pcbp4	ENSMUST00000185996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023495	Pcbp4	ENSMUST00000189099	ENSMUSP00000139991	TRANSLATION	protein_coding	start/stop	-	1	77	0	1.99	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000185507	ENSMUSP00000140660	TRANSLATION	nonsense_mediated_decay	start	-	3	150	0	2.578	0	55.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000189882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023495	Pcbp4	ENSMUST00000190430	ENSMUSP00000140485	TRANSLATION	protein_coding	stop	-	5	113	0	3.34	0	56.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000217405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023495	Pcbp4	ENSMUST00000214252	ENSMUSP00000148962	TRANSLATION	protein_coding	stop	-	5	190	0	4.148	0	85.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000213752	ENSMUSP00000149974	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	1.428	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023495	Pcbp4	ENSMUST00000188396	ENSMUSP00000139771	TRANSLATION	protein_coding	start	-	2	215	0	2.4	0	37	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000040541	Tmem225	ENSMUST00000238613	ENSMUSP00000158671	TRANSLATION	protein_coding	stop	-	-	127	0	0	0	0	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000040541	Tmem225	ENSMUST00000046333	ENSMUSP00000036816	TRANSLATION	protein_coding	-	CCDS52774.1	1	230	0	0	1.5	0	5	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000032514	Ttc21a	ENSMUST00000161967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032514	Ttc21a	ENSMUST00000160790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032514	Ttc21a	ENSMUST00000159128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032514	Ttc21a	ENSMUST00000035100	ENSMUSP00000035100	TRANSLATION	protein_coding	-	CCDS40805.1	1	1314	0	1.25	2.7	91.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032582	Rbm6	ENSMUST00000194250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032582	Rbm6	ENSMUST00000182242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032582	Rbm6	ENSMUST00000181986	ENSMUSP00000138172	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	1,3	-	-	-1	MINOR
ENSMUSG00000032582	Rbm6	ENSMUST00000183035	ENSMUSP00000138236	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032582	Rbm6	ENSMUST00000035201	ENSMUSP00000035201	TRANSLATION	protein_coding	-	CCDS23507.1	1	986	4	3.115	1.7	0	0	-4,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000032582	Rbm6	ENSMUST00000183032	ENSMUSP00000138400	TRANSLATION	protein_coding	-	CCDS59749.1	1	1118	4	3.115	2.7	0	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000032582	Rbm6	ENSMUST00000194436	ENSMUSP00000142283	TRANSLATION	protein_coding	start	-	3	187	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032582	Rbm6	ENSMUST00000195883	ENSMUSP00000141953	TRANSLATION	protein_coding	stop	-	2	77	4	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032582	Rbm6	ENSMUST00000195866	ENSMUSP00000141622	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032582	Rbm6	ENSMUST00000183152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032582	Rbm6	ENSMUST00000183179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032582	Rbm6	ENSMUST00000193957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032582	Rbm6	ENSMUST00000192474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032582	Rbm6	ENSMUST00000182445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032582	Rbm6	ENSMUST00000182301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032582	Rbm6	ENSMUST00000182092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060510	Zfp266	ENSMUST00000215908	ENSMUSP00000149315	TRANSLATION	protein_coding	stop	-	3	99	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060510	Zfp266	ENSMUST00000213275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060510	Zfp266	ENSMUST00000174462	ENSMUSP00000134217	TRANSLATION	protein_coding	-	CCDS52732.1	1	604	42	2.1	1.5	289.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060510	Zfp266	ENSMUST00000213418	ENSMUSP00000150538	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060510	Zfp266	ENSMUST00000068296	ENSMUSP00000066012	TRANSLATION	protein_coding	-	CCDS52732.1	1	604	42	2.1	1.5	289.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060510	Zfp266	ENSMUST00000217488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032038	St3gal4	ENSMUST00000217542	ENSMUSP00000150423	TRANSLATION	protein_coding	stop	-	2	115	0	0.3	0	0	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000215089	ENSMUSP00000149489	TRANSLATION	protein_coding	stop	-	5	134	0	0.63	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000214526	ENSMUSP00000149827	TRANSLATION	protein_coding	stop	-	3	160	0	0.63	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000213526	ENSMUSP00000150841	TRANSLATION	protein_coding	stop	-	2	204	4	2.255	0	92.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000034537	ENSMUSP00000034537	TRANSLATION	protein_coding	-	CCDS22956.1	1	333	10	3.845	1.5	207.1	1	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000032038	St3gal4	ENSMUST00000217149	ENSMUSP00000150187	TRANSLATION	protein_coding	stop	-	3	74	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000215463	ENSMUSP00000149145	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	1	2,-3	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000215638	ENSMUSP00000149302	TRANSLATION	protein_coding	stop	-	5	113	0	0.3	0	0	1	-4,0	-	-	-1	MINOR
ENSMUSG00000032038	St3gal4	ENSMUST00000216557	ENSMUSP00000150775	TRANSLATION	protein_coding	stop	-	5	181	2	1.13	0	34.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000095774	Olfr970	ENSMUST00000215922	ENSMUSP00000150325	TRANSLATION	protein_coding	-	CCDS23062.1	3	311	0	0.36	6.4	178.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095774	Olfr970	ENSMUST00000213975	ENSMUSP00000150900	TRANSLATION	protein_coding	-	CCDS23062.1	5	311	0	0.36	6.4	178.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095774	Olfr970	ENSMUST00000071132	ENSMUSP00000071132	TRANSLATION	protein_coding	-	CCDS23062.1	-	311	0	0.36	6.4	178.7	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000066383	Iqcf1	ENSMUST00000164965	ENSMUSP00000126039	TRANSLATION	protein_coding	-	CCDS52911.1	1	147	0	0.2	1.5	55.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000066383	Iqcf1	ENSMUST00000085114	ENSMUSP00000082195	TRANSLATION	protein_coding	-	CCDS52910.1	1	182	0	0.2	1.5	55.8	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000066383	Iqcf1	ENSMUST00000215037	ENSMUSP00000149801	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037129	Tmprss13	ENSMUST00000034597	ENSMUSP00000034597	TRANSLATION	protein_coding	-	CCDS23132.1	1	548	11	5.646	0.5	304.8	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000051493	Olfr974	ENSMUST00000062833	ENSMUSP00000062985	TRANSLATION	protein_coding	-	CCDS23066.1	-	310	0	0.3	2.7	176	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051493	Olfr974	ENSMUST00000213246	ENSMUSP00000149630	TRANSLATION	protein_coding	-	CCDS23066.1	2	310	0	0.3	2.7	176	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010051	Hyal1	ENSMUST00000184695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010051	Hyal1	ENSMUST00000144392	ENSMUSP00000120599	TRANSLATION	protein_coding	-	-	5	432	0	3.264	0	364.6	0	-1,1	-	-	5.598	MINOR
ENSMUSG00000010051	Hyal1	ENSMUST00000123005	ENSMUSP00000122601	TRANSLATION	protein_coding	-	-	3	182	0	3.264	0	101.4	0	-4,-2	-	-	4.002	MINOR
ENSMUSG00000010051	Hyal1	ENSMUST00000112387	ENSMUSP00000108006	TRANSLATION	protein_coding	-	-	1	458	0	4	0	438	0	-1,1	-	-	11.472	ALTERNATIVE:2
ENSMUSG00000010051	Hyal1	ENSMUST00000010195	ENSMUSP00000010195	TRANSLATION	protein_coding	-	CCDS23497.1	1	462	0	4.264	0.5	438	0	-1,1	-	-	12	PRINCIPAL:2
ENSMUSG00000032080	Apoa4	ENSMUST00000034585	ENSMUSP00000034585	TRANSLATION	protein_coding	-	CCDS23142.1	1	395	0	1.6	0.5	108.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000051414	Olfr829	ENSMUST00000058411	ENSMUSP00000058101	TRANSLATION	protein_coding	-	CCDS22847.1	-	321	0	0.2	0.5	176.9	6	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000051414	Olfr829	ENSMUST00000212229	ENSMUSP00000148395	TRANSLATION	protein_coding	-	-	5	312	0	0.2	2.7	176.9	6	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044820	AY074887	ENSMUST00000054018	ENSMUSP00000049861	TRANSLATION	protein_coding	-	CCDS23198.1	-	132	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000045414	Dipk2a	ENSMUST00000113028	ENSMUSP00000108651	TRANSLATION	protein_coding	-	CCDS40725.1	1	430	0	0	8.8	180.8	0	2,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000042210	Abhd14a	ENSMUST00000190798	ENSMUSP00000141096	TRANSLATION	protein_coding	stop	-	3	157	1	2.35	0	27.9	0	1,-3	-	-	-1	MINOR
ENSMUSG00000042210	Abhd14a	ENSMUST00000187983	ENSMUSP00000140901	TRANSLATION	protein_coding	stop	-	5	202	1	3.315	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000042210	Abhd14a	ENSMUST00000171925	ENSMUSP00000126916	TRANSLATION	protein_coding	-	CCDS52908.1	3	266	3	4.23	0.5	0	0	1,-3	-	-	8.502	MINOR
ENSMUSG00000042210	Abhd14a	ENSMUST00000185334	ENSMUSP00000140345	TRANSLATION	protein_coding	-	CCDS40757.1	5	248	3	4.48	0.5	29.1	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000042210	Abhd14a	ENSMUST00000171678	ENSMUSP00000126101	TRANSLATION	protein_coding	-	CCDS40757.1	1	248	3	4.48	0.5	29.1	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000042210	Abhd14a	ENSMUST00000187001	ENSMUSP00000140042	TRANSLATION	protein_coding	stop	-	5	137	0	1.435	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000042210	Abhd14a	ENSMUST00000187798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042210	Abhd14a	ENSMUST00000048685	ENSMUSP00000047322	TRANSLATION	protein_coding	-	CCDS40757.1	5	248	3	4.48	0.5	29.1	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000032009	Sesn3	ENSMUST00000209106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032009	Sesn3	ENSMUST00000207207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032009	Sesn3	ENSMUST00000034507	ENSMUSP00000034507	TRANSLATION	protein_coding	-	-	5	414	0	6.33	2.4	632.3	0	-4,-7	-	-	7.785	MINOR
ENSMUSG00000032009	Sesn3	ENSMUST00000209145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032009	Sesn3	ENSMUST00000208142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032009	Sesn3	ENSMUST00000208222	ENSMUSP00000146362	TRANSLATION	protein_coding	-	CCDS22820.1	1	492	0	7.68	7.5	668.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032009	Sesn3	ENSMUST00000209187	ENSMUSP00000146784	TRANSLATION	protein_coding	-	-	5	353	0	5.33	1.2	483.9	0	-4,-2	-	-	1.395	MINOR
ENSMUSG00000037681	Esyt3	ENSMUST00000186626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037681	Esyt3	ENSMUST00000187520	ENSMUSP00000140567	TRANSLATION	protein_coding	start/stop	-	3	198	5	5.15	0	110.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037681	Esyt3	ENSMUST00000187365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037681	Esyt3	ENSMUST00000190002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037681	Esyt3	ENSMUST00000042158	ENSMUSP00000038757	TRANSLATION	protein_coding	-	CCDS40739.1	1	891	6	14.914	1.5	370.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050555	Hyls1	ENSMUST00000132547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050555	Hyls1	ENSMUST00000115110	ENSMUSP00000110762	TRANSLATION	protein_coding	-	CCDS52754.1	1	314	0	0	5.1	131.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000111842	Gm49318	ENSMUST00000213738	ENSMUSP00000149314	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	188	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000037206	Islr	ENSMUST00000217578	ENSMUSP00000150316	TRANSLATION	protein_coding	stop	-	3	150	0	0.8	0	50.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000037206	Islr	ENSMUST00000168864	ENSMUSP00000126963	TRANSLATION	protein_coding	-	CCDS23237.1	1	428	0	1.08	1.7	127.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037206	Islr	ENSMUST00000041477	ENSMUSP00000045142	TRANSLATION	protein_coding	-	CCDS23237.1	1	428	0	1.08	1.7	127.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040722	Scamp5	ENSMUST00000213771	ENSMUSP00000149622	TRANSLATION	nonsense_mediated_decay	-	-	3	69	0	0	0	52.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040722	Scamp5	ENSMUST00000215208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040722	Scamp5	ENSMUST00000046587	ENSMUSP00000035898	TRANSLATION	protein_coding	-	CCDS40649.1	1	235	0	0	13	233.2	4	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040722	Scamp5	ENSMUST00000214256	ENSMUSP00000150867	TRANSLATION	protein_coding	-	CCDS40649.1	1	235	0	0	13	233.2	4	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000040722	Scamp5	ENSMUST00000215734	ENSMUSP00000151197	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0	0	50.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040722	Scamp5	ENSMUST00000215059	ENSMUSP00000150248	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074061	Fbxw19	ENSMUST00000197191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074061	Fbxw19	ENSMUST00000076617	ENSMUSP00000075918	TRANSLATION	protein_coding	-	CCDS23552.1	1	466	0	0	0.5	39	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032496	Ltf	ENSMUST00000198233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032496	Ltf	ENSMUST00000196122	ENSMUSP00000143234	TRANSLATION	protein_coding	stop	-	5	184	9	4.15	0	262.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000198152	ENSMUSP00000143342	TRANSLATION	nonsense_mediated_decay	start	-	5	19	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000035077	ENSMUSP00000035077	TRANSLATION	protein_coding	-	CCDS23581.1	1	707	21	18.178	0.5	861.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032496	Ltf	ENSMUST00000196777	ENSMUSP00000143629	TRANSLATION	protein_coding	stop	-	3	122	7	3.75	0	205	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000199815	ENSMUSP00000142403	TRANSLATION	nonsense_mediated_decay	start	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000196209	ENSMUSP00000143731	TRANSLATION	protein_coding	stop	-	3	78	1	2.528	0	26.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000197575	ENSMUSP00000142691	TRANSLATION	protein_coding	start	-	3	127	4	2.5792	0	79.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000200459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032496	Ltf	ENSMUST00000197893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032496	Ltf	ENSMUST00000198884	ENSMUSP00000142432	TRANSLATION	protein_coding	-	-	5	95	2	2.25	0	125	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032496	Ltf	ENSMUST00000199313	ENSMUSP00000142739	TRANSLATION	protein_coding	start	-	3	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064110	Olfr963	ENSMUST00000215649	ENSMUSP00000148985	TRANSLATION	protein_coding	-	CCDS23056.1	5	311	0	0	6.4	167.2	7	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000064110	Olfr963	ENSMUST00000073433	ENSMUSP00000073139	TRANSLATION	protein_coding	-	CCDS23056.1	-	311	0	0	6.4	167.2	7	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000032121	Tmem218	ENSMUST00000034632	ENSMUSP00000034632	TRANSLATION	protein_coding	-	CCDS22975.1	1	115	0	0	9.5	0	0	1,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000032586	Traip	ENSMUST00000194538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032586	Traip	ENSMUST00000193715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032586	Traip	ENSMUST00000194191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032586	Traip	ENSMUST00000195803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032586	Traip	ENSMUST00000192567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032586	Traip	ENSMUST00000194271	ENSMUSP00000141689	TRANSLATION	protein_coding	stop	-	5	142	8	1.4	0	39.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032586	Traip	ENSMUST00000049348	ENSMUSP00000040001	TRANSLATION	protein_coding	-	CCDS23511.1	1	470	8	1.4	6.3	39.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000039461	Tcta	ENSMUST00000044725	ENSMUSP00000045063	TRANSLATION	protein_coding	-	CCDS23520.1	1	122	0	0	2.7	123.1	1	-2,-4	-	-	5.46	MINOR
ENSMUSG00000039461	Tcta	ENSMUST00000192886	ENSMUSP00000142002	TRANSLATION	protein_coding	-	CCDS81073.1	2	106	0	0	7.5	145.2	1	-2,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000039461	Tcta	ENSMUST00000195615	ENSMUSP00000141592	TRANSLATION	protein_coding	-	-	5	133	0	0	0	125.9	1	-2,-4	-	-	4.842	MINOR
ENSMUSG00000032232	Cgnl1	ENSMUST00000072899	ENSMUSP00000072672	TRANSLATION	protein_coding	-	CCDS23328.1	5	1297	0	6.17	0.5	120.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032232	Cgnl1	ENSMUST00000122065	ENSMUSP00000112479	TRANSLATION	protein_coding	-	CCDS23328.1	1	1297	0	6.17	0.5	120.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032232	Cgnl1	ENSMUST00000121322	ENSMUSP00000113917	TRANSLATION	protein_coding	-	-	5	1226	0	5.69	0	119.6	0	-4,-5	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000032232	Cgnl1	ENSMUST00000146567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032232	Cgnl1	ENSMUST00000136044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032232	Cgnl1	ENSMUST00000152224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032327	Stra6	ENSMUST00000150820	ENSMUSP00000122373	TRANSLATION	protein_coding	stop	-	3	167	0	2.91	0	134.2	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000133287	ENSMUSP00000114346	TRANSLATION	protein_coding	stop	-	3	139	0	2.41	0	91.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000128378	ENSMUSP00000115511	TRANSLATION	protein_coding	stop	-	3	164	0	2.91	0	131	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000145886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032327	Stra6	ENSMUST00000136338	ENSMUSP00000115314	TRANSLATION	protein_coding	stop	-	3	99	0	1.81	0	49.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000134955	ENSMUSP00000117280	TRANSLATION	protein_coding	stop	-	3	190	0	3.66	0	170.9	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000034880	ENSMUSP00000034880	TRANSLATION	protein_coding	-	CCDS23236.1	1	670	0	13.464	1.5	816	11	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032327	Stra6	ENSMUST00000170397	ENSMUSP00000130232	TRANSLATION	protein_coding	-	CCDS23236.1	5	670	0	13.464	1.5	816	11	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032327	Stra6	ENSMUST00000167479	ENSMUSP00000128417	TRANSLATION	protein_coding	-	CCDS23236.1	5	670	0	13.464	1.5	816	11	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032327	Stra6	ENSMUST00000147134	ENSMUSP00000115315	TRANSLATION	protein_coding	stop	-	3	162	0	2.91	0	124	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000128021	ENSMUSP00000117832	TRANSLATION	protein_coding	stop	-	3	86	0	1.63	0	31.5	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000134450	ENSMUSP00000118242	TRANSLATION	protein_coding	stop	-	5	63	0	1.03	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000136154	ENSMUSP00000119062	TRANSLATION	protein_coding	stop	-	5	199	0	3.924	0	187.4	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000032327	Stra6	ENSMUST00000085677	ENSMUSP00000082820	TRANSLATION	protein_coding	-	CCDS23236.1	1	670	0	13.464	1.5	816	11	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036781	Rps27l	ENSMUST00000146573	ENSMUSP00000115242	TRANSLATION	protein_coding	start	-	3	33	0	0.75	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036781	Rps27l	ENSMUST00000123931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036781	Rps27l	ENSMUST00000127896	ENSMUSP00000120518	TRANSLATION	protein_coding	-	CCDS81028.1	5	105	4	2.25	0.5	95.4	0	-4,-5	-	-	15.442	MINOR
ENSMUSG00000036781	Rps27l	ENSMUST00000147394	ENSMUSP00000118963	TRANSLATION	nonsense_mediated_decay	-	-	5	77	4	2.25	0	96.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036781	Rps27l	ENSMUST00000040917	ENSMUSP00000046016	TRANSLATION	protein_coding	-	CCDS40673.1	1	84	4	2.25	19.5	104.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036781	Rps27l	ENSMUST00000143044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036737	Oxsr1	ENSMUST00000136902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036737	Oxsr1	ENSMUST00000040853	ENSMUSP00000042155	TRANSLATION	protein_coding	-	CCDS57714.1	1	527	19	12.88	7.5	286.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036737	Oxsr1	ENSMUST00000128880	ENSMUSP00000122692	TRANSLATION	nonsense_mediated_decay	-	-	1	113	14	3.05	0	57.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036737	Oxsr1	ENSMUST00000143728	ENSMUSP00000117327	TRANSLATION	nonsense_mediated_decay	start	-	5	139	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066510	Ankdd1a	ENSMUST00000217144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066510	Ankdd1a	ENSMUST00000217646	ENSMUSP00000150130	TRANSLATION	protein_coding	stop	-	5	508	0	10.16	1.5	178.7	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000066510	Ankdd1a	ENSMUST00000061766	ENSMUSP00000057040	TRANSLATION	protein_coding	start	-	5	480	0	10	0	184	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000074448	Pate9	ENSMUST00000098900	ENSMUSP00000096499	TRANSLATION	protein_coding	-	CCDS52766.1	1	101	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000032394	Igdcc3	ENSMUST00000217135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032394	Igdcc3	ENSMUST00000217371	ENSMUSP00000149084	TRANSLATION	protein_coding	-	-	1	813	0	7.24	0.5	299.1	1	-1,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000032394	Igdcc3	ENSMUST00000034961	ENSMUSP00000034961	TRANSLATION	protein_coding	-	CCDS52835.1	1	793	0	7.24	0.5	299.1	1	-1,1	-	-	12	PRINCIPAL:2
ENSMUSG00000049103	Ccr2	ENSMUST00000171719	ENSMUSP00000130112	TRANSLATION	protein_coding	-	CCDS23669.1	1	373	0	1	1.5	167.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049103	Ccr2	ENSMUST00000055918	ENSMUSP00000049909	TRANSLATION	protein_coding	-	CCDS23669.1	1	373	0	1	1.5	167.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049103	Ccr2	ENSMUST00000168841	ENSMUSP00000132453	TRANSLATION	protein_coding	-	CCDS23669.1	1	373	0	1	1.5	167.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049103	Ccr2	ENSMUST00000165984	ENSMUSP00000128734	TRANSLATION	protein_coding	-	CCDS23669.1	-	373	0	1	1.5	167.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000110266	Gm32742	ENSMUST00000210433	ENSMUSP00000148191	TRANSLATION	protein_coding	-	-	5	1604	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037286	Stag1	ENSMUST00000143150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000138405	ENSMUSP00000116322	TRANSLATION	nonsense_mediated_decay	-	-	1	306	0	5.85	0	132.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000123315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000143816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000123302	ENSMUSP00000117879	TRANSLATION	nonsense_mediated_decay	-	-	1	424	0	9.01	0	132.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000149771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037286	Stag1	ENSMUST00000041418	ENSMUSP00000040724	TRANSLATION	protein_coding	-	-	5	1221	0	25.34	1.7	132.5	0	-4,-5	-	-	12.204	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000143955	ENSMUSP00000115460	TRANSLATION	protein_coding	start/stop	-	5	285	0	5.83	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000144005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000133388	ENSMUSP00000119637	TRANSLATION	protein_coding	stop	-	3	144	0	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000129269	ENSMUSP00000116205	TRANSLATION	protein_coding	-	CCDS23441.1	1	1258	0	25.34	14.8	132.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037286	Stag1	ENSMUST00000146934	ENSMUSP00000120974	TRANSLATION	protein_coding	start	-	5	869	0	16.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000155108	ENSMUSP00000118952	TRANSLATION	nonsense_mediated_decay	-	-	1	174	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000146312	ENSMUSP00000116597	TRANSLATION	protein_coding	stop	-	1	196	0	2.35	0	125.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037286	Stag1	ENSMUST00000191345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000122824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037286	Stag1	ENSMUST00000124487	ENSMUSP00000123595	TRANSLATION	protein_coding	stop	-	5	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032456	Nmnat3	ENSMUST00000112938	ENSMUSP00000108560	TRANSLATION	protein_coding	-	-	1	126	12	3.68	0.5	85.9	0	-4,-2	-	-	7.086	MINOR
ENSMUSG00000032456	Nmnat3	ENSMUST00000141427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032456	Nmnat3	ENSMUST00000112937	ENSMUSP00000108559	TRANSLATION	protein_coding	-	-	1	179	15	2.6	0	65	0	-4,-5	-	-	3.672	MINOR
ENSMUSG00000032456	Nmnat3	ENSMUST00000134253	ENSMUSP00000141111	TRANSLATION	protein_coding	stop	-	3	56	9	1.5	0	42.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032456	Nmnat3	ENSMUST00000129771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032456	Nmnat3	ENSMUST00000112935	ENSMUSP00000108557	TRANSLATION	protein_coding	-	CCDS23423.1	1	245	24	4.68	1.5	134.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032839	Trpc1	ENSMUST00000188141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032839	Trpc1	ENSMUST00000190604	ENSMUSP00000139577	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032839	Trpc1	ENSMUST00000190205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032839	Trpc1	ENSMUST00000190497	ENSMUSP00000140550	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032839	Trpc1	ENSMUST00000189137	ENSMUSP00000139672	TRANSLATION	protein_coding	-	CCDS23411.1	1	809	3	0.66	1.5	146.7	11	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000032839	Trpc1	ENSMUST00000186235	ENSMUSP00000140994	TRANSLATION	protein_coding	start/stop	-	3	255	3	0	0	60.1	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000032839	Trpc1	ENSMUST00000053785	ENSMUSP00000057640	TRANSLATION	protein_coding	-	CCDS81052.1	1	775	3	0.66	0.5	146.7	11	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000039115	Itga9	ENSMUST00000124422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039115	Itga9	ENSMUST00000155437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039115	Itga9	ENSMUST00000149150	ENSMUSP00000122408	TRANSLATION	protein_coding	start	-	3	175	0	1.518	0	75.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039115	Itga9	ENSMUST00000124360	ENSMUSP00000122417	TRANSLATION	protein_coding	-	CCDS52961.1	1	450	0	4.258	0.5	201.2	1	-4,-5	-	-	0	MINOR
ENSMUSG00000039115	Itga9	ENSMUST00000044165	ENSMUSP00000044227	TRANSLATION	protein_coding	-	CCDS23604.1	1	1036	17	17.068	1.7	378.1	1	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000039115	Itga9	ENSMUST00000125021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048429	Timm29	ENSMUST00000062125	ENSMUSP00000058283	TRANSLATION	protein_coding	-	CCDS22908.1	1	266	0	0	1.5	200	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000032198	Dock6	ENSMUST00000217310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032198	Dock6	ENSMUST00000034728	ENSMUSP00000034728	TRANSLATION	protein_coding	-	-	5	2080	0	8.16	1.5	948.5	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000032198	Dock6	ENSMUST00000213296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032198	Dock6	ENSMUST00000217336	ENSMUSP00000149156	TRANSLATION	protein_coding	-	CCDS40555.1	5	2111	0	8.16	1.5	948.5	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000032198	Dock6	ENSMUST00000213775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032198	Dock6	ENSMUST00000217515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032198	Dock6	ENSMUST00000216626	ENSMUSP00000150347	TRANSLATION	protein_coding	start	-	1	477	0	0	0	149.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032198	Dock6	ENSMUST00000215729	ENSMUSP00000150250	TRANSLATION	nonsense_mediated_decay	start	-	1	577	0	1.16	0	219.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063382	Bcl9l	ENSMUST00000074989	ENSMUSP00000074516	TRANSLATION	protein_coding	-	CCDS40601.1	1	1494	0	1.15	1.5	55.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000063382	Bcl9l	ENSMUST00000218183	ENSMUSP00000151837	TRANSLATION	protein_coding	-	CCDS40601.1	5	1494	0	1.15	1.5	55.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000063382	Bcl9l	ENSMUST00000218913	ENSMUSP00000151653	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063382	Bcl9l	ENSMUST00000220303	ENSMUSP00000151342	TRANSLATION	protein_coding	-	-	1	1457	0	1.15	1.5	55.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000063382	Bcl9l	ENSMUST00000217898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063382	Bcl9l	ENSMUST00000220292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053862	Slc51b	ENSMUST00000065894	ENSMUSP00000064494	TRANSLATION	protein_coding	-	CCDS23291.1	1	128	0	0	1.7	174.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000049932	H2ax	ENSMUST00000052686	ENSMUSP00000051432	TRANSLATION	protein_coding	-	CCDS23105.1	-	143	0	1	9.8	133.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000101152	Gm28305	ENSMUST00000147249	ENSMUSP00000115381	TRANSLATION	protein_coding,RT	start/stop	-	2	122	0	3.3	0	49.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000032388	Spg21	ENSMUST00000216992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032388	Spg21	ENSMUST00000213957	ENSMUSP00000150034	TRANSLATION	protein_coding	-	-	1	306	0	1.46	0	33	0	-4,-5	-	-	12	MINOR
ENSMUSG00000032388	Spg21	ENSMUST00000215170	ENSMUSP00000150052	TRANSLATION	protein_coding	stop	-	2	135	0	1.22	0	26.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032388	Spg21	ENSMUST00000034955	ENSMUSP00000034955	TRANSLATION	protein_coding	-	CCDS23293.1	1	308	0	1.46	10.8	33	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032359	Ctsh	ENSMUST00000132718	ENSMUSP00000117599	TRANSLATION	protein_coding	stop	-	3	198	4	3.84	0	145.2	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000032359	Ctsh	ENSMUST00000123320	ENSMUSP00000122108	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0.33	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032359	Ctsh	ENSMUST00000127842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032359	Ctsh	ENSMUST00000185459	ENSMUSP00000140437	TRANSLATION	protein_coding	start/stop	-	5	290	4	7.09	0	303.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032359	Ctsh	ENSMUST00000186126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032359	Ctsh	ENSMUST00000034915	ENSMUSP00000034915	TRANSLATION	protein_coding	-	CCDS23399.1	1	333	6	8.42	2.7	334.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032359	Ctsh	ENSMUST00000151219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032359	Ctsh	ENSMUST00000143172	ENSMUSP00000114427	TRANSLATION	protein_coding	stop	-	3	119	0	1.83	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032359	Ctsh	ENSMUST00000187437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032359	Ctsh	ENSMUST00000142750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032359	Ctsh	ENSMUST00000190338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000104614	Fbxw27	ENSMUST00000199430	ENSMUSP00000148730	TRANSLATION	protein_coding	start	-	5	254	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104614	Fbxw27	ENSMUST00000199197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000104614	Fbxw27	ENSMUST00000211814	ENSMUSP00000148740	TRANSLATION	nonsense_mediated_decay	start	-	3	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104614	Fbxw27	ENSMUST00000212674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000104614	Fbxw27	ENSMUST00000197125	ENSMUSP00000148376	TRANSLATION	protein_coding	-	CCDS85731.1	3	209	0	1.3	0.5	46.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000104614	Fbxw27	ENSMUST00000200610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000104614	Fbxw27	ENSMUST00000198666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000104614	Fbxw27	ENSMUST00000212725	ENSMUSP00000148340	TRANSLATION	protein_coding	-	-	5	466	0	1.3	0.5	46.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000038145	Snrk	ENSMUST00000131169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038145	Snrk	ENSMUST00000142784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038145	Snrk	ENSMUST00000120173	ENSMUSP00000112919	TRANSLATION	protein_coding	-	CCDS23644.1	1	748	21	5.43	1.5	248.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038145	Snrk	ENSMUST00000146832	ENSMUSP00000117994	TRANSLATION	protein_coding	stop	-	3	54	10	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038145	Snrk	ENSMUST00000134949	ENSMUSP00000119878	TRANSLATION	protein_coding	stop	-	1	411	21	5.43	0	248.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038145	Snrk	ENSMUST00000118886	ENSMUSP00000114132	TRANSLATION	protein_coding	-	CCDS23644.1	1	748	21	5.43	1.5	248.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038145	Snrk	ENSMUST00000217631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038145	Snrk	ENSMUST00000151872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038145	Snrk	ENSMUST00000119215	ENSMUSP00000113906	TRANSLATION	protein_coding	stop	-	5	220	21	3.75	0	217.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038145	Snrk	ENSMUST00000215432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038145	Snrk	ENSMUST00000139181	ENSMUSP00000120582	TRANSLATION	protein_coding	stop	-	2	90	11	2	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038145	Snrk	ENSMUST00000145384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046678	Olfr981	ENSMUST00000219526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046678	Olfr981	ENSMUST00000220338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046678	Olfr981	ENSMUST00000059859	ENSMUSP00000057952	TRANSLATION	protein_coding	-	CCDS23072.1	-	310	0	0.2	3.9	183.8	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046678	Olfr981	ENSMUST00000215956	ENSMUSP00000149436	TRANSLATION	protein_coding	-	CCDS23072.1	5	310	0	0.2	3.9	183.8	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000032609	Klhdc8b	ENSMUST00000195869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193895	ENSMUSP00000141453	TRANSLATION	protein_coding	-	CCDS23526.1	5	354	0	3.33	8.8	112.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000192210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032609	Klhdc8b	ENSMUST00000194559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193286	ENSMUSP00000142325	TRANSLATION	protein_coding	-	CCDS23526.1	1	354	0	3.33	8.8	112.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032609	Klhdc8b	ENSMUST00000193911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032609	Klhdc8b	ENSMUST00000192245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000192196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032609	Klhdc8b	ENSMUST00000194633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032609	Klhdc8b	ENSMUST00000035232	ENSMUSP00000035232	TRANSLATION	protein_coding	-	CCDS23526.1	1	354	0	3.33	8.8	112.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032609	Klhdc8b	ENSMUST00000192160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032609	Klhdc8b	ENSMUST00000195435	ENSMUSP00000141558	TRANSLATION	protein_coding	-	-	5	308	0	2.55	0	105.5	0	-4,-2	-	-	10.008	MINOR
ENSMUSG00000015354	Pcolce2	ENSMUST00000151210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015354	Pcolce2	ENSMUST00000015498	ENSMUSP00000015498	TRANSLATION	protein_coding	-	CCDS23410.1	1	414	9	5.99	3.9	258.1	0	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000032123	Dpagt1	ENSMUST00000215050	ENSMUSP00000150178	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	1.55	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000032123	Dpagt1	ENSMUST00000054708	ENSMUSP00000056282	TRANSLATION	protein_coding	-	CCDS23104.1	1	410	0	9.13	9.5	0	7	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000032123	Dpagt1	ENSMUST00000215248	ENSMUSP00000150465	TRANSLATION	nonsense_mediated_decay	-	-	5	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032123	Dpagt1	ENSMUST00000216327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032123	Dpagt1	ENSMUST00000213461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032123	Dpagt1	ENSMUST00000217225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038357	Camp	ENSMUST00000112022	ENSMUSP00000107653	TRANSLATION	protein_coding	-	CCDS52934.1	1	172	0	2.55	0.5	210.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053199	Arhgap20	ENSMUST00000130405	ENSMUSP00000120124	TRANSLATION	protein_coding	-	-	5	1146	0	4.8	0	185.6	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000053199	Arhgap20	ENSMUST00000065496	ENSMUSP00000065633	TRANSLATION	protein_coding	-	CCDS23177.1	5	1182	0	4.8	0.5	185.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000053199	Arhgap20	ENSMUST00000126567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053199	Arhgap20	ENSMUST00000124907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053199	Arhgap20	ENSMUST00000146509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053199	Arhgap20	ENSMUST00000149754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032373	Car12	ENSMUST00000085420	ENSMUSP00000082541	TRANSLATION	protein_coding	-	CCDS81026.1	1	344	6	6.08	3.9	306.8	2	1,-4	-	-	19	ALTERNATIVE:2
ENSMUSG00000032373	Car12	ENSMUST00000134829	ENSMUSP00000118030	TRANSLATION	protein_coding	start/stop	-	5	204	2	3.36	0	148.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000032373	Car12	ENSMUST00000071889	ENSMUSP00000071786	TRANSLATION	protein_coding	-	CCDS23306.1	1	354	6	6.08	3.9	306.8	2	1,-4	-	-	19	PRINCIPAL:3
ENSMUSG00000032373	Car12	ENSMUST00000123195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032373	Car12	ENSMUST00000152011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032373	Car12	ENSMUST00000217394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052911	Lamb2	ENSMUST00000194421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052911	Lamb2	ENSMUST00000194147	ENSMUSP00000141562	TRANSLATION	protein_coding	stop	-	5	105	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052911	Lamb2	ENSMUST00000191864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052911	Lamb2	ENSMUST00000195483	ENSMUSP00000142304	TRANSLATION	protein_coding	stop	-	2	124	3	3.15	0	55.6	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000052911	Lamb2	ENSMUST00000195058	ENSMUSP00000141757	TRANSLATION	protein_coding	stop	-	5	102	3	2.4	0	49.4	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000052911	Lamb2	ENSMUST00000193301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052911	Lamb2	ENSMUST00000065014	ENSMUSP00000069087	TRANSLATION	protein_coding	-	CCDS23528.1	1	1799	3	21.81	2.7	701.6	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000156425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000135545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000111861	ENSMUSP00000107492	TRANSLATION	protein_coding	-	CCDS52947.1	1	874	0	14.25	3.9	378	0	-4,-5	-	-	12.82	ALTERNATIVE:2
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000142256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000137104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032504	Pdcd6ip	ENSMUST00000035086	ENSMUSP00000035086	TRANSLATION	protein_coding	-	CCDS23588.1	1	869	0	14.25	3.9	381	0	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000040729	Cep126	ENSMUST00000217241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040729	Cep126	ENSMUST00000037397	ENSMUSP00000042904	TRANSLATION	protein_coding	-	CCDS40534.1	1	1103	0	0	0.5	1354	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040729	Cep126	ENSMUST00000214150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040729	Cep126	ENSMUST00000238782	ENSMUSP00000158638	TRANSLATION	nonsense_mediated_decay	-	-	-	544	0	0	0	126.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032262	Elovl4	ENSMUST00000034796	ENSMUSP00000034796	TRANSLATION	protein_coding	-	CCDS23376.1	1	312	0	0	8.8	225.6	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000032262	Elovl4	ENSMUST00000183614	ENSMUSP00000139163	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	158.5	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000058820	Olfr146	ENSMUST00000073671	ENSMUSP00000073352	TRANSLATION	protein_coding	-	CCDS23036.1	-	306	0	1.48	2.8	178.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058820	Olfr146	ENSMUST00000214410	ENSMUSP00000149294	TRANSLATION	protein_coding	-	CCDS23036.1	5	306	0	1.48	2.8	178.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058820	Olfr146	ENSMUST00000215383	ENSMUSP00000151064	TRANSLATION	protein_coding	stop	-	3	150	0	1.24	0	89	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000058820	Olfr146	ENSMUST00000214369	ENSMUSP00000150090	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	34.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000032079	Apoa5	ENSMUST00000215458	ENSMUSP00000149877	TRANSLATION	protein_coding	stop	-	5	112	0	0.32	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032079	Apoa5	ENSMUST00000214202	ENSMUSP00000149834	TRANSLATION	protein_coding	stop	-	5	138	0	0.48	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032079	Apoa5	ENSMUST00000213878	ENSMUSP00000149135	TRANSLATION	protein_coding	-	-	3	115	0	0.62	0	0	0	4,-1	-	-	1.794	MINOR
ENSMUSG00000032079	Apoa5	ENSMUST00000121598	ENSMUSP00000113413	TRANSLATION	protein_coding	-	CCDS23143.1	1	368	0	2.072	1.5	201.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032079	Apoa5	ENSMUST00000034584	ENSMUSP00000034584	TRANSLATION	protein_coding	-	CCDS23143.1	1	368	0	2.072	1.5	201.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032079	Apoa5	ENSMUST00000215187	ENSMUSP00000151068	TRANSLATION	protein_coding	-	-	5	47	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000090592	Gm17571	ENSMUST00000167906	ENSMUSP00000133186	TRANSLATION	protein_coding	start/stop	-	5	30	0	0	0	0	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000049073	Olfr985	ENSMUST00000060345	ENSMUSP00000058372	TRANSLATION	protein_coding	-	CCDS23076.1	-	311	0	0.16	7.5	189.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049073	Olfr985	ENSMUST00000214981	ENSMUSP00000149371	TRANSLATION	protein_coding	-	CCDS23076.1	3	311	0	0.16	7.5	189.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032349	Elovl5	ENSMUST00000134072	ENSMUSP00000120171	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	33.7	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032349	Elovl5	ENSMUST00000133757	ENSMUSP00000123121	TRANSLATION	protein_coding	stop	-	3	180	0	0	0	146.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000032349	Elovl5	ENSMUST00000148398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032349	Elovl5	ENSMUST00000034904	ENSMUSP00000034904	TRANSLATION	protein_coding	-	CCDS23355.1	1	299	0	0	7.5	221.7	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000010064	Slc38a3	ENSMUST00000193932	ENSMUSP00000142087	TRANSLATION	protein_coding	-	CCDS23503.1	1	505	0	0	2.7	360.4	14	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010064	Slc38a3	ENSMUST00000195843	ENSMUSP00000141552	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	34.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010064	Slc38a3	ENSMUST00000192990	ENSMUSP00000141528	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	85.7	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000010064	Slc38a3	ENSMUST00000195739	ENSMUSP00000141484	TRANSLATION	nonsense_mediated_decay	start	-	3	160	0	0	0	44.9	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000010064	Slc38a3	ENSMUST00000195033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010064	Slc38a3	ENSMUST00000194895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010064	Slc38a3	ENSMUST00000194230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010064	Slc38a3	ENSMUST00000191923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010064	Slc38a3	ENSMUST00000177567	ENSMUSP00000137561	TRANSLATION	protein_coding	-	CCDS23503.1	1	505	0	0	2.7	360.4	14	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010064	Slc38a3	ENSMUST00000192211	ENSMUSP00000141569	TRANSLATION	nonsense_mediated_decay	start	-	3	125	0	0	0	79.3	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000010064	Slc38a3	ENSMUST00000167868	ENSMUSP00000130414	TRANSLATION	protein_coding	-	CCDS23503.1	1	505	0	0	2.7	360.4	14	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010064	Slc38a3	ENSMUST00000192323	ENSMUSP00000141850	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	111.7	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000010064	Slc38a3	ENSMUST00000193495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010064	Slc38a3	ENSMUST00000010208	ENSMUSP00000010208	TRANSLATION	protein_coding	-	CCDS23503.1	1	505	0	0	2.7	360.4	14	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047667	Olfr26	ENSMUST00000104874	ENSMUSP00000100467	TRANSLATION	protein_coding	-	CCDS23030.1	-	308	0	0.2	6.4	166	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060254	Olfr980	ENSMUST00000073932	ENSMUSP00000091386	TRANSLATION	protein_coding	-	CCDS23071.1	-	310	0	0.2	6.3	187.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060254	Olfr980	ENSMUST00000216463	ENSMUSP00000150496	TRANSLATION	protein_coding	-	CCDS23071.1	5	310	0	0.2	6.3	187.2	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039016	Timm8b	ENSMUST00000044051	ENSMUSP00000039335	TRANSLATION	protein_coding	-	CCDS40624.1	1	83	0	0.8	2.7	78.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074564	Gm10720	ENSMUST00000099050	ENSMUSP00000096649	TRANSLATION	protein_coding	stop	-	5	223	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000032258	Lca5	ENSMUST00000191225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032258	Lca5	ENSMUST00000190557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032258	Lca5	ENSMUST00000188548	ENSMUSP00000140334	TRANSLATION	protein_coding	stop	-	2	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032258	Lca5	ENSMUST00000190514	ENSMUSP00000140753	TRANSLATION	nonsense_mediated_decay	-	-	5	453	0	0	0	215	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032258	Lca5	ENSMUST00000034791	ENSMUSP00000034791	TRANSLATION	protein_coding	-	CCDS23374.1	1	704	0	0	0.5	215	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000032258	Lca5	ENSMUST00000188907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032258	Lca5	ENSMUST00000034793	ENSMUSP00000034793	TRANSLATION	protein_coding	-	CCDS23373.1	1	419	0	0	1.5	215	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032258	Lca5	ENSMUST00000186802	ENSMUSP00000139529	TRANSLATION	protein_coding	stop	-	2	176	0	0	0	98	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032258	Lca5	ENSMUST00000190373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032589	Bsn	ENSMUST00000035208	ENSMUSP00000035208	TRANSLATION	protein_coding	-	CCDS23517.1	5	3942	4	0	0.5	186.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032589	Bsn	ENSMUST00000124763	ENSMUSP00000139053	TRANSLATION	protein_coding	start	-	1	1171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061393	Acvr2b	ENSMUST00000165044	ENSMUSP00000126108	TRANSLATION	protein_coding	-	CCDS23615.1	2	536	18	9.33	1.5	145	1	1,-2	-	-	18.141	MINOR
ENSMUSG00000061393	Acvr2b	ENSMUST00000217621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061393	Acvr2b	ENSMUST00000215746	ENSMUSP00000150566	TRANSLATION	protein_coding	-	-	1	512	18	9.33	11.6	145	1	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000061393	Acvr2b	ENSMUST00000213389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061393	Acvr2b	ENSMUST00000213431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061393	Acvr2b	ENSMUST00000035093	ENSMUSP00000035093	TRANSLATION	protein_coding	-	-	5	528	18	9	0	145	1	1,-2	-	-	17.34	MINOR
ENSMUSG00000032207	Lipc	ENSMUST00000215814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032207	Lipc	ENSMUST00000034731	ENSMUSP00000034731	TRANSLATION	protein_coding	-	CCDS23324.1	1	510	7	4.67	0.5	531.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032207	Lipc	ENSMUST00000214995	ENSMUSP00000149638	TRANSLATION	protein_coding	stop	-	3	107	0	0.93	0	47.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032207	Lipc	ENSMUST00000216798	ENSMUSP00000149185	TRANSLATION	protein_coding	-	-	1	425	7	4.07	0.5	483.3	0	-4,-7	-	-	13.896	MINOR
ENSMUSG00000032484	Ngp	ENSMUST00000035061	ENSMUSP00000035061	TRANSLATION	protein_coding	-	CCDS23566.1	1	167	0	2.05	1.5	109	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036777	Anln	ENSMUST00000216793	ENSMUSP00000149740	TRANSLATION	protein_coding	start	-	2	122	0	2.8	0	71.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036777	Anln	ENSMUST00000217010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036777	Anln	ENSMUST00000040912	ENSMUSP00000045873	TRANSLATION	protein_coding	-	CCDS22927.1	1	1121	0	10.19	0.5	351.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036777	Anln	ENSMUST00000216897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036777	Anln	ENSMUST00000215006	ENSMUSP00000149721	TRANSLATION	protein_coding	start/stop	-	5	239	0	5.66	0	92.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036777	Anln	ENSMUST00000215486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004096	Cwc15	ENSMUST00000216619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004096	Cwc15	ENSMUST00000213913	ENSMUSP00000149476	TRANSLATION	protein_coding	-	CCDS22823.1	3	229	0	5.75	6.1	257.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000004096	Cwc15	ENSMUST00000004200	ENSMUSP00000004200	TRANSLATION	protein_coding	-	CCDS22823.1	1	229	0	5.75	6.1	257.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000004096	Cwc15	ENSMUST00000215143	ENSMUSP00000151148	TRANSLATION	protein_coding	stop	-	3	79	0	2	0	85.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063221	Olfr930	ENSMUST00000058789	ENSMUSP00000080385	TRANSLATION	protein_coding	-	CCDS23032.1	-	308	0	0	6.4	152.8	4	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000063221	Olfr930	ENSMUST00000217208	ENSMUSP00000149230	TRANSLATION	protein_coding	-	CCDS23032.1	5	308	0	0	6.4	152.8	4	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000053646	Plxnb1	ENSMUST00000131462	ENSMUSP00000115265	TRANSLATION	protein_coding	stop	-	2	140	0	1	0	56.4	0	1,-3	-	-	-1	MINOR
ENSMUSG00000053646	Plxnb1	ENSMUST00000072093	ENSMUSP00000071966	TRANSLATION	protein_coding	-	CCDS23546.1	1	2119	0	26.03	1.5	1098.2	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000053646	Plxnb1	ENSMUST00000192117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053646	Plxnb1	ENSMUST00000192988	ENSMUSP00000142431	TRANSLATION	protein_coding	start/stop	-	5	266	0	3	0	86.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053646	Plxnb1	ENSMUST00000194734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053646	Plxnb1	ENSMUST00000130366	ENSMUSP00000114358	TRANSLATION	protein_coding	stop	-	3	140	0	1	0	56.4	0	1,-3	-	-	-1	MINOR
ENSMUSG00000053646	Plxnb1	ENSMUST00000195364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091248	Pate8	ENSMUST00000170030	ENSMUSP00000126891	TRANSLATION	protein_coding	-	CCDS52767.1	1	109	0	0	0.5	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000054156	Gm4894	ENSMUST00000067007	ENSMUSP00000065580	TRANSLATION	protein_coding	-	CCDS52790.1	5	118	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000054156	Gm4894	ENSMUST00000216428	ENSMUSP00000149729	TRANSLATION	protein_coding	-	CCDS52790.1	1	118	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000079677	Fdx2	ENSMUST00000216484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079677	Fdx2	ENSMUST00000217150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079677	Fdx2	ENSMUST00000010348	ENSMUSP00000010348	TRANSLATION	protein_coding	-	CCDS22892.1	1	174	11	2.85	1.5	39.9	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000079677	Fdx2	ENSMUST00000215631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079677	Fdx2	ENSMUST00000215338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000180339	ENSMUSP00000136717	TRANSLATION	protein_coding	-	CCDS22835.1	1	315	3	7.25	7.6	414	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000034414	ENSMUSP00000034414	TRANSLATION	protein_coding	-	CCDS22835.1	1	315	3	7.25	7.6	414	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000215741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000217042	ENSMUSP00000150223	TRANSLATION	protein_coding	-	-	3	56	0	1.5	0	35.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000213317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000216073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000216077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000216955	ENSMUSP00000149878	TRANSLATION	protein_coding	-	-	1	282	3	6.25	1.7	365.6	0	-4,-5	-	-	10.416	MINOR
ENSMUSG00000031938	4931406C07Rik	ENSMUST00000178977	ENSMUSP00000136335	TRANSLATION	protein_coding	-	CCDS22835.1	1	315	3	7.25	7.6	414	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006941	Eif1b	ENSMUST00000217553	ENSMUSP00000149825	TRANSLATION	protein_coding	stop	-	3	100	0	2.33	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006941	Eif1b	ENSMUST00000007139	ENSMUSP00000007139	TRANSLATION	protein_coding	-	CCDS23628.1	1	113	0	2.83	19.5	100.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079227	Ccr5	ENSMUST00000171499	ENSMUSP00000127328	TRANSLATION	protein_coding	stop	-	5	123	0	1.4	0	65.3	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000079227	Ccr5	ENSMUST00000169553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079227	Ccr5	ENSMUST00000171579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079227	Ccr5	ENSMUST00000097855	ENSMUSP00000149719	TRANSLATION	nonsense_mediated_decay	start	-	3	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079227	Ccr5	ENSMUST00000168179	ENSMUSP00000129848	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079227	Ccr5	ENSMUST00000111442	ENSMUSP00000107069	TRANSLATION	protein_coding	-	CCDS40821.1	1	354	0	2	7.5	162.9	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000060114	Olfr910	ENSMUST00000215122	ENSMUSP00000149263	TRANSLATION	protein_coding	-	CCDS23016.1	5	310	0	0.2	5.1	166.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000035164	Zc3h12c	ENSMUST00000165519	ENSMUSP00000127603	TRANSLATION	protein_coding	-	CCDS52794.1	5	903	4	3	1.5	218.5	0	-4,-5	-	-	16.188	MINOR
ENSMUSG00000035164	Zc3h12c	ENSMUST00000213645	ENSMUSP00000150821	TRANSLATION	protein_coding	-	-	5	884	4	3	6.3	218.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032128	Robo3	ENSMUST00000170512	ENSMUSP00000150639	TRANSLATION	nonsense_mediated_decay	-	-	1	1345	0	13.59	0	349.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000032128	Robo3	ENSMUST00000167216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032128	Robo3	ENSMUST00000167089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032128	Robo3	ENSMUST00000034643	ENSMUSP00000034643	TRANSLATION	protein_coding	-	-	5	1380	0	13.59	0	349.7	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000032128	Robo3	ENSMUST00000171467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032128	Robo3	ENSMUST00000115038	ENSMUSP00000110690	TRANSLATION	protein_coding	-	CCDS52770.1	5	1402	0	13.39	0.5	349.7	1	-2,-5	-	-	11.598	PRINCIPAL:2
ENSMUSG00000032548	Slco2a1	ENSMUST00000185215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032548	Slco2a1	ENSMUST00000188664	ENSMUSP00000140533	TRANSLATION	nonsense_mediated_decay	-	-	1	414	0	0	0	383.1	7	-4,0	-	-	-1	MINOR
ENSMUSG00000032548	Slco2a1	ENSMUST00000190892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032548	Slco2a1	ENSMUST00000035148	ENSMUSP00000035148	TRANSLATION	protein_coding	-	CCDS23448.1	1	643	0	0	2.7	622.6	12	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000032497	Lrrfip2	ENSMUST00000035078	ENSMUSP00000035078	TRANSLATION	protein_coding	-	CCDS52941.1	5	415	0	2.75	1.5	344.2	0	-4,-6	-	-	11.136	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000239186	ENSMUSP00000159250	TRANSLATION	protein_coding	-	-	-	722	0	2.75	3.6	197.4	0	-4,-5	-	-	6.84	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000239196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032497	Lrrfip2	ENSMUST00000198127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032497	Lrrfip2	ENSMUST00000196703	ENSMUSP00000142753	TRANSLATION	protein_coding	start/stop	-	5	149	0	0	0	73.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000199711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032497	Lrrfip2	ENSMUST00000200094	ENSMUSP00000142471	TRANSLATION	protein_coding	stop	-	3	173	0	1	0	162.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000098340	ENSMUSP00000095944	TRANSLATION	protein_coding	-	CCDS23583.1	1	400	0	2.75	10.3	361.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000032497	Lrrfip2	ENSMUST00000197256	ENSMUSP00000143322	TRANSLATION	protein_coding	-	-	5	437	0	2.75	1	332	0	-4,-6	-	-	10.242	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000197241	ENSMUSP00000142816	TRANSLATION	protein_coding	-	CCDS52941.1	1	415	0	2.75	1.5	344.2	0	-4,-6	-	-	11.136	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000216430	ENSMUSP00000149212	TRANSLATION	protein_coding	-	-	5	403	0	2.75	0	273.9	0	-4,-7	-	-	6.756	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000196981	ENSMUSP00000142851	TRANSLATION	protein_coding	-	-	5	424	0	2.75	10.3	349.1	0	-4,-6	-	-	14.268	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000217341	ENSMUSP00000149845	TRANSLATION	protein_coding	-	-	5	670	0	2.75	1	218.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000239333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032497	Lrrfip2	ENSMUST00000196906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032497	Lrrfip2	ENSMUST00000198986	ENSMUSP00000143756	TRANSLATION	protein_coding	stop	-	5	173	0	2.75	0	191.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000217117	ENSMUSP00000151145	TRANSLATION	protein_coding	-	-	5	373	0	2.75	0	293.8	0	-4,-6	-	-	7.95	MINOR
ENSMUSG00000032497	Lrrfip2	ENSMUST00000197540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089865	Gm44503	ENSMUST00000149692	ENSMUSP00000120629	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	387	0	1.52	0	24.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000047352	Olfr976	ENSMUST00000217630	ENSMUSP00000150494	TRANSLATION	protein_coding	-	-	5	314	0	0.36	1.5	164.3	6	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000047352	Olfr976	ENSMUST00000213171	ENSMUSP00000150077	TRANSLATION	protein_coding	-	-	1	314	0	0.36	1.5	164.3	6	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000047352	Olfr976	ENSMUST00000217360	ENSMUSP00000151213	TRANSLATION	protein_coding	-	-	-	314	0	0.36	1.5	164.3	6	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000047352	Olfr976	ENSMUST00000169307	ENSMUSP00000133083	TRANSLATION	protein_coding	-	CCDS23068.1	-	326	0	0.36	0.5	164.3	6	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000059303	Olfr836	ENSMUST00000212730	ENSMUSP00000148738	TRANSLATION	protein_coding	-	-	5	314	0	0.42	2.9	170.9	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000059303	Olfr836	ENSMUST00000215981	ENSMUSP00000150026	TRANSLATION	protein_coding	-	-	5	314	0	0.42	2.9	170.9	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000059303	Olfr836	ENSMUST00000074986	ENSMUSP00000074514	TRANSLATION	protein_coding	-	CCDS22852.1	-	317	0	0.42	2.9	170.9	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000062309	Rpp25	ENSMUST00000080514	ENSMUSP00000079358	TRANSLATION	protein_coding	-	CCDS23222.1	-	199	0	0	3.9	58.5	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000032342	Mto1	ENSMUST00000148238	ENSMUSP00000121424	TRANSLATION	nonsense_mediated_decay	-	-	5	198	11	2.2	0	183.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032342	Mto1	ENSMUST00000150850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032342	Mto1	ENSMUST00000157051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032342	Mto1	ENSMUST00000133002	ENSMUSP00000123414	TRANSLATION	protein_coding	start	-	5	89	0	1.64	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032342	Mto1	ENSMUST00000034896	ENSMUSP00000034896	TRANSLATION	protein_coding	-	CCDS23363.1	1	669	15	9.66	1.7	716.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032342	Mto1	ENSMUST00000136478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059412	Fxyd2	ENSMUST00000214654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000214680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000214017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000216289	ENSMUSP00000150658	TRANSLATION	protein_coding	-	-	5	57	4	2.08	0	82.5	2	-4,-6	-	-	15.118	MINOR
ENSMUSG00000059412	Fxyd2	ENSMUST00000216840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000041005	ENSMUSP00000035429	TRANSLATION	protein_coding	-	CCDS23134.1	1	64	4	2.41	7.5	83.3	2	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000059412	Fxyd2	ENSMUST00000217549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000214466	ENSMUSP00000149140	TRANSLATION	nonsense_mediated_decay	-	-	1	70	4	1.76	0	63.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000059412	Fxyd2	ENSMUST00000213282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000213158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059412	Fxyd2	ENSMUST00000213850	ENSMUSP00000150521	TRANSLATION	protein_coding	stop	-	3	12	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059412	Fxyd2	ENSMUST00000214257	ENSMUSP00000149343	TRANSLATION	protein_coding	stop	-	5	19	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059412	Fxyd2	ENSMUST00000214245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066810	Gm10181	ENSMUST00000086238	ENSMUSP00000083414	TRANSLATION	protein_coding	start/stop	-	-	23	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000095839	Olfr965	ENSMUST00000215164	ENSMUSP00000150401	TRANSLATION	protein_coding	-	CCDS23058.1	5	312	0	0.3	6.4	160.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095839	Olfr965	ENSMUST00000213335	ENSMUSP00000149456	TRANSLATION	protein_coding	-	CCDS23058.1	5	312	0	0.3	6.4	160.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095839	Olfr965	ENSMUST00000069342	ENSMUSP00000069696	TRANSLATION	protein_coding	-	CCDS23058.1	-	312	0	0.3	6.4	160.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032113	Chek1	ENSMUST00000174794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032113	Chek1	ENSMUST00000174105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032113	Chek1	ENSMUST00000173796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032113	Chek1	ENSMUST00000034625	ENSMUSP00000034625	TRANSLATION	protein_coding	-	CCDS22972.1	1	476	18	9.62	7.6	224.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032113	Chek1	ENSMUST00000173977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032113	Chek1	ENSMUST00000172742	ENSMUSP00000133589	TRANSLATION	protein_coding	stop	-	3	74	9	1.75	0	46.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032113	Chek1	ENSMUST00000173963	ENSMUSP00000134029	TRANSLATION	protein_coding	-	-	5	442	18	9.22	1.2	224.1	0	-4,-5	-	-	17.292	MINOR
ENSMUSG00000032113	Chek1	ENSMUST00000172702	ENSMUSP00000134388	TRANSLATION	protein_coding	-	CCDS22972.1	1	476	18	9.62	7.6	224.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000066905	Olfr860	ENSMUST00000211924	ENSMUSP00000148658	TRANSLATION	protein_coding	stop	-	3	165	0	0.6	0	90.6	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000066905	Olfr860	ENSMUST00000086482	ENSMUSP00000130735	TRANSLATION	protein_coding	-	CCDS22865.1	2	317	0	0.84	0.5	189.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066905	Olfr860	ENSMUST00000212353	ENSMUSP00000148568	TRANSLATION	protein_coding	-	CCDS22865.1	-	317	0	0.84	0.5	189.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032320	Rcn2	ENSMUST00000114276	ENSMUSP00000109915	TRANSLATION	protein_coding	-	CCDS23206.1	1	320	20	1	5.1	60.5	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000032320	Rcn2	ENSMUST00000147842	ENSMUSP00000120953	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032320	Rcn2	ENSMUST00000151585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032320	Rcn2	ENSMUST00000144869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045620	Odf3l1	ENSMUST00000215694	ENSMUSP00000149166	TRANSLATION	protein_coding	-	-	1	306	0	0	0.5	13.9	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000045620	Odf3l1	ENSMUST00000055036	ENSMUSP00000060418	TRANSLATION	protein_coding	-	CCDS23210.1	1	275	0	0	3.9	13.9	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000070304	Scn2b	ENSMUST00000170998	ENSMUSP00000126826	TRANSLATION	protein_coding	-	CCDS40606.1	1	215	0	2.3	8.8	75.6	1	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000070304	Scn2b	ENSMUST00000093855	ENSMUSP00000091377	TRANSLATION	protein_coding	-	CCDS40606.1	2	215	0	2.3	8.8	75.6	1	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000043911	Olfr922	ENSMUST00000051004	ENSMUSP00000057086	TRANSLATION	protein_coding	-	CCDS23027.1	-	311	0	0.16	6.4	174.6	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043911	Olfr922	ENSMUST00000213164	ENSMUSP00000149057	TRANSLATION	protein_coding	-	CCDS23027.1	5	311	0	0.16	6.4	174.6	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040652	Oaz2	ENSMUST00000128664	ENSMUSP00000137468	TRANSLATION	protein_coding	start	-	3	121	0	1.75	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040652	Oaz2	ENSMUST00000137696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040652	Oaz2	ENSMUST00000046490	ENSMUSP00000136873	TRANSLATION	protein_coding	-	-	5	188	0	3.275	17	73.3	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000040652	Oaz2	ENSMUST00000153700	ENSMUSP00000136914	TRANSLATION	protein_coding	-	CCDS57683.1	5	189	0	3.275	17	73.3	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000040652	Oaz2	ENSMUST00000154502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040652	Oaz2	ENSMUST00000128928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040652	Oaz2	ENSMUST00000136166	ENSMUSP00000136082	TRANSLATION	protein_coding	-	-	5	130	0	1.525	0	0	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000032202	Rab27a	ENSMUST00000184032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032202	Rab27a	ENSMUST00000184575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032202	Rab27a	ENSMUST00000034722	ENSMUSP00000034722	TRANSLATION	protein_coding	-	CCDS23335.1	1	221	19	4.75	17.5	190.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000032202	Rab27a	ENSMUST00000184146	ENSMUSP00000139310	TRANSLATION	protein_coding	-	CCDS23335.1	1	221	19	4.75	17.5	190.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000042185	Nfrkb	ENSMUST00000215544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042185	Nfrkb	ENSMUST00000150179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042185	Nfrkb	ENSMUST00000215211	ENSMUSP00000149841	TRANSLATION	protein_coding	stop	-	5	324	0	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042185	Nfrkb	ENSMUST00000131540	ENSMUSP00000119622	TRANSLATION	nonsense_mediated_decay	-	-	3	114	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042185	Nfrkb	ENSMUST00000152593	ENSMUSP00000119025	TRANSLATION	nonsense_mediated_decay	-	-	1	258	0	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042185	Nfrkb	ENSMUST00000086167	ENSMUSP00000083341	TRANSLATION	protein_coding	-	CCDS22949.1	1	1296	0	6.65	5.1	107.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042185	Nfrkb	ENSMUST00000128375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042185	Nfrkb	ENSMUST00000134528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042185	Nfrkb	ENSMUST00000132329	ENSMUSP00000116404	TRANSLATION	nonsense_mediated_decay	-	-	1	215	0	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042185	Nfrkb	ENSMUST00000143558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032508	Myd88	ENSMUST00000035092	ENSMUSP00000035092	TRANSLATION	protein_coding	-	CCDS23612.1	1	296	0	5.35	1.5	105.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032508	Myd88	ENSMUST00000150837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032508	Myd88	ENSMUST00000139870	ENSMUSP00000115746	TRANSLATION	protein_coding	stop	-	2	109	0	1	0	42.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032171	Pin1	ENSMUST00000034689	ENSMUSP00000034689	TRANSLATION	protein_coding	-	CCDS22882.1	1	165	7	3.75	6.3	56.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033453	Adamts15	ENSMUST00000216215	ENSMUSP00000150677	TRANSLATION	protein_coding	stop	-	2	56	5	1.75	0	24.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033453	Adamts15	ENSMUST00000065112	ENSMUSP00000067022	TRANSLATION	protein_coding	-	CCDS22945.1	1	950	18	6.93	3.9	336.3	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000033453	Adamts15	ENSMUST00000217070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000123464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041506	Rrp9	ENSMUST00000131618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000127400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000217303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000125630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000156796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041506	Rrp9	ENSMUST00000047721	ENSMUSP00000038580	TRANSLATION	protein_coding	-	CCDS23481.1	1	475	0	11.53	6.3	88	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000041506	Rrp9	ENSMUST00000185336	ENSMUSP00000140949	TRANSLATION	nonsense_mediated_decay	start	-	3	67	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040219	Ttc12	ENSMUST00000055096	ENSMUSP00000056378	TRANSLATION	protein_coding	-	CCDS23163.1	1	704	0	3.828	3.9	53.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000040219	Ttc12	ENSMUST00000146666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031918	Mtmr2	ENSMUST00000134530	ENSMUSP00000121223	TRANSLATION	protein_coding	start	-	2	67	0	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031918	Mtmr2	ENSMUST00000143002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031918	Mtmr2	ENSMUST00000134674	ENSMUSP00000121933	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031918	Mtmr2	ENSMUST00000155679	ENSMUSP00000115906	TRANSLATION	protein_coding	-	-	5	571	7	12.5	12.8	587.7	0	-4,-5	-	-	17.824	MINOR
ENSMUSG00000031918	Mtmr2	ENSMUST00000152532	ENSMUSP00000114509	TRANSLATION	protein_coding	stop	-	5	105	0	3.25	0	68.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031918	Mtmr2	ENSMUST00000146901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031918	Mtmr2	ENSMUST00000136735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031918	Mtmr2	ENSMUST00000156801	ENSMUSP00000117332	TRANSLATION	protein_coding	-	-	5	82	0	1.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031918	Mtmr2	ENSMUST00000034396	ENSMUSP00000034396	TRANSLATION	protein_coding	-	CCDS22818.3	1	643	7	14.58	10.8	588	0	-4,-5	-	-	21.324	PRINCIPAL:1
ENSMUSG00000050621	Rps27rt	ENSMUST00000053150	ENSMUSP00000060523	TRANSLATION	protein_coding	-	CCDS52952.1	-	84	4	1	19.5	104.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032393	Dpp8	ENSMUST00000167773	ENSMUSP00000126065	TRANSLATION	protein_coding	-	CCDS23285.1	1	892	5	9.357	1.5	539.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000032393	Dpp8	ENSMUST00000217434	ENSMUSP00000150334	TRANSLATION	nonsense_mediated_decay	-	-	1	334	0	1.6	0	125.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032393	Dpp8	ENSMUST00000217328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032393	Dpp8	ENSMUST00000214247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032393	Dpp8	ENSMUST00000034960	ENSMUSP00000034960	TRANSLATION	protein_coding	-	CCDS23285.1	1	892	5	9.357	1.5	539.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000032393	Dpp8	ENSMUST00000216309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032393	Dpp8	ENSMUST00000214678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032393	Dpp8	ENSMUST00000216010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032311	Nrg4	ENSMUST00000126368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000164721	ENSMUSP00000130929	TRANSLATION	protein_coding	-	CCDS52801.1	5	115	4	1	5.1	0	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032311	Nrg4	ENSMUST00000133659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000145784	ENSMUSP00000115851	TRANSLATION	nonsense_mediated_decay	-	-	2	80	3	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032311	Nrg4	ENSMUST00000144939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000130158	ENSMUSP00000115247	TRANSLATION	protein_coding	-	CCDS52801.1	5	115	4	1	5.1	0	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032311	Nrg4	ENSMUST00000114306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032311	Nrg4	ENSMUST00000139261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000137675	ENSMUSP00000114336	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032311	Nrg4	ENSMUST00000156112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000135531	ENSMUSP00000114412	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032311	Nrg4	ENSMUST00000128020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032311	Nrg4	ENSMUST00000134183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032473	Cldn18	ENSMUST00000035048	ENSMUSP00000035048	TRANSLATION	protein_coding	-	CCDS23437.1	1	264	0	2.64	6.3	94.5	6	3,-2	-	-	13.736	PRINCIPAL:3
ENSMUSG00000032473	Cldn18	ENSMUST00000112882	ENSMUSP00000108503	TRANSLATION	protein_coding	-	CCDS57694.1	1	264	0	2.64	6.3	98.8	6	2,-3	-	-	14	ALTERNATIVE:1
ENSMUSG00000032473	Cldn18	ENSMUST00000131922	ENSMUSP00000117382	TRANSLATION	protein_coding	-	CCDS57693.1	1	208	0	2.64	0.5	98.8	6	2,-3	-	-	12	MINOR
ENSMUSG00000032473	Cldn18	ENSMUST00000136429	ENSMUSP00000115782	TRANSLATION	protein_coding	-	CCDS57692.1	1	208	0	2.64	0.5	94.5	6	3,-2	-	-	11.736	MINOR
ENSMUSG00000074472	Zfp872	ENSMUST00000217301	ENSMUSP00000149642	TRANSLATION	protein_coding	stop	-	3	207	12	2.05	0	138.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074472	Zfp872	ENSMUST00000091508	ENSMUSP00000089089	TRANSLATION	protein_coding	start	-	5	464	48	2.85	0.5	299.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074472	Zfp872	ENSMUST00000178901	ENSMUSP00000136074	TRANSLATION	protein_coding	-	CCDS57663.1	1	465	48	2.85	0.5	299.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032338	Hcn4	ENSMUST00000034889	ENSMUSP00000034889	TRANSLATION	protein_coding	-	CCDS52815.1	1	1201	12	6.4	0.5	215.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032221	Mns1	ENSMUST00000183809	ENSMUSP00000139105	TRANSLATION	protein_coding	stop	-	3	219	0	0	0	78.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032221	Mns1	ENSMUST00000184604	ENSMUSP00000139232	TRANSLATION	protein_coding	stop	-	3	206	0	0	0	37.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032221	Mns1	ENSMUST00000034746	ENSMUSP00000034746	TRANSLATION	protein_coding	-	CCDS40684.1	1	491	0	0	1.7	265.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038112	AW551984	ENSMUST00000136814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038112	AW551984	ENSMUST00000119722	ENSMUSP00000113212	TRANSLATION	protein_coding	-	CCDS23052.1	1	804	3	0	0.5	194.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000038112	AW551984	ENSMUST00000141370	ENSMUSP00000117328	TRANSLATION	protein_coding	stop	-	3	210	0	0	0	107	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038112	AW551984	ENSMUST00000128054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038112	AW551984	ENSMUST00000147753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038112	AW551984	ENSMUST00000042485	ENSMUSP00000042582	TRANSLATION	protein_coding	-	CCDS23052.1	1	804	3	0	0.5	194.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000038112	AW551984	ENSMUST00000130829	ENSMUSP00000117262	TRANSLATION	protein_coding	stop	-	2	52	0	0	0	26.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031996	Aplp2	ENSMUST00000217516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031996	Aplp2	ENSMUST00000214908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031996	Aplp2	ENSMUST00000214396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031996	Aplp2	ENSMUST00000217641	ENSMUSP00000149023	TRANSLATION	protein_coding	-	-	1	695	0	11.105	0.5	539.3	1	4,-1	-	-	5.736	MINOR
ENSMUSG00000031996	Aplp2	ENSMUST00000213254	ENSMUSP00000149732	TRANSLATION	protein_coding	stop	-	5	624	0	9.55	0	523.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000031996	Aplp2	ENSMUST00000079758	ENSMUSP00000078694	TRANSLATION	protein_coding	-	CCDS52748.1	1	707	0	11.305	0.5	539.3	1	4,-1	-	-	6.132	MINOR
ENSMUSG00000031996	Aplp2	ENSMUST00000216921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031996	Aplp2	ENSMUST00000072634	ENSMUSP00000072428	TRANSLATION	protein_coding	-	CCDS52749.1	1	751	0	12.105	0.5	610.4	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031996	Aplp2	ENSMUST00000217658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031996	Aplp2	ENSMUST00000213273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032249	Anp32a	ENSMUST00000126451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032249	Anp32a	ENSMUST00000129026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032249	Anp32a	ENSMUST00000135395	ENSMUSP00000122165	TRANSLATION	protein_coding	-	-	5	233	0	4.832	1.5	40.9	0	-4,-5	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000032249	Anp32a	ENSMUST00000085519	ENSMUSP00000082652	TRANSLATION	protein_coding	-	CCDS40663.1	1	247	0	5.332	2.8	40.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032249	Anp32a	ENSMUST00000145679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032249	Anp32a	ENSMUST00000128636	ENSMUSP00000123574	TRANSLATION	protein_coding	stop	-	2	198	0	4.45	0	40.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032249	Anp32a	ENSMUST00000136603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032249	Anp32a	ENSMUST00000141277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032249	Anp32a	ENSMUST00000156461	ENSMUSP00000115293	TRANSLATION	protein_coding	start/stop	-	2	138	0	3.1	0	40.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032249	Anp32a	ENSMUST00000138226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006675	P4htm	ENSMUST00000193621	ENSMUSP00000141843	TRANSLATION	protein_coding	-	-	1	225	4	0	0	0	1	-4,-6	-	-	0.666	MINOR
ENSMUSG00000006675	P4htm	ENSMUST00000192080	ENSMUSP00000141993	TRANSLATION	protein_coding	start	-	2	144	4	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000006675	P4htm	ENSMUST00000194900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006675	P4htm	ENSMUST00000006853	ENSMUSP00000006853	TRANSLATION	protein_coding	-	CCDS23533.1	1	503	12	1.98	2.9	87.1	1	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006675	P4htm	ENSMUST00000195181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006675	P4htm	ENSMUST00000191674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032182	Yipf2	ENSMUST00000034700	ENSMUSP00000034700	TRANSLATION	protein_coding	-	CCDS22907.1	1	312	0	0	1.5	70	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032182	Yipf2	ENSMUST00000078572	ENSMUSP00000077649	TRANSLATION	protein_coding	-	CCDS22907.1	1	312	0	0	1.5	70	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032182	Yipf2	ENSMUST00000213809	ENSMUSP00000149626	TRANSLATION	protein_coding	-	-	1	122	0	0	0	0	3	-3,-5	-	-	0	MINOR
ENSMUSG00000032182	Yipf2	ENSMUST00000180365	ENSMUSP00000136463	TRANSLATION	protein_coding	-	CCDS22907.1	1	312	0	0	1.5	70	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058443	Rpl10-ps3	ENSMUST00000076364	ENSMUSP00000125806	TRANSLATION	protein_coding	-	-	-	214	0	1	17.5	150.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000059867	Olfr960	ENSMUST00000215616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059867	Olfr960	ENSMUST00000077060	ENSMUSP00000076315	TRANSLATION	protein_coding	-	CCDS23054.1	-	316	0	0	3.9	164.3	7	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000059867	Olfr960	ENSMUST00000216584	ENSMUSP00000148949	TRANSLATION	protein_coding	-	-	3	314	0	0	3.9	164.3	7	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000052698	Tln2	ENSMUST00000040025	ENSMUSP00000039633	TRANSLATION	protein_coding	-	CCDS52849.1	5	2542	0	54.25	17.5	913.8	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000052698	Tln2	ENSMUST00000216799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052698	Tln2	ENSMUST00000039662	ENSMUSP00000035272	TRANSLATION	protein_coding	-	CCDS52849.1	1	2542	0	54.25	17.5	913.8	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000052698	Tln2	ENSMUST00000215784	ENSMUSP00000148901	TRANSLATION	protein_coding	-	-	5	2544	0	54.25	17.5	913.8	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000052698	Tln2	ENSMUST00000215267	ENSMUSP00000149284	TRANSLATION	protein_coding	-	-	1	1452	0	30.55	0	382.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052698	Tln2	ENSMUST00000213584	ENSMUSP00000151111	TRANSLATION	protein_coding	stop	-	1	137	0	3.3	0	179.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052698	Tln2	ENSMUST00000214859	ENSMUSP00000149137	TRANSLATION	protein_coding	start	-	1	923	0	19.5	0	187.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052698	Tln2	ENSMUST00000217550	ENSMUSP00000149474	TRANSLATION	protein_coding	start	-	1	1471	0	31.3	0	396.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052698	Tln2	ENSMUST00000215593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032059	Alg9	ENSMUST00000162363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032059	Alg9	ENSMUST00000162073	ENSMUSP00000125425	TRANSLATION	nonsense_mediated_decay	-	-	1	205	0	0	0	96.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032059	Alg9	ENSMUST00000162442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032059	Alg9	ENSMUST00000034561	ENSMUSP00000034561	TRANSLATION	protein_coding	-	CCDS23175.1	1	611	0	0	0.5	415.9	10	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000032059	Alg9	ENSMUST00000161200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032059	Alg9	ENSMUST00000175728	ENSMUSP00000135023	TRANSLATION	protein_coding	start	-	3	87	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032059	Alg9	ENSMUST00000162596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032059	Alg9	ENSMUST00000159576	ENSMUSP00000123711	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	138.7	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000032059	Alg9	ENSMUST00000177320	ENSMUSP00000134818	TRANSLATION	nonsense_mediated_decay	start	-	5	109	0	0	0	45.3	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000094380	Olfr904	ENSMUST00000216724	ENSMUSP00000150057	TRANSLATION	protein_coding	-	CCDS23011.1	5	310	0	0.3	5.1	172	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094380	Olfr904	ENSMUST00000058153	ENSMUSP00000057148	TRANSLATION	protein_coding	-	CCDS23011.1	-	310	0	0.3	5.1	172	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000010651	Acaa1b	ENSMUST00000127952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010651	Acaa1b	ENSMUST00000010795	ENSMUSP00000010795	TRANSLATION	protein_coding	-	CCDS23608.1	1	424	16	9.55	6.3	463.4	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000042138	Msantd2	ENSMUST00000048604	ENSMUSP00000043329	TRANSLATION	protein_coding	-	CCDS22978.1	1	559	0	0	2.9	75.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000042138	Msantd2	ENSMUST00000211792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042138	Msantd2	ENSMUST00000211224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042138	Msantd2	ENSMUST00000239459	ENSMUSP00000159310	TRANSLATION	protein_coding	-	-	-	647	0	0	1.2	75.8	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000042138	Msantd2	ENSMUST00000209391	ENSMUSP00000148126	TRANSLATION	nonsense_mediated_decay	start	-	2	94	0	0	0	54.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042138	Msantd2	ENSMUST00000214298	ENSMUSP00000148883	TRANSLATION	protein_coding	start/stop	-	2	141	0	0	0	58.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042138	Msantd2	ENSMUST00000239463	ENSMUSP00000159374	TRANSLATION	protein_coding	-	CCDS22978.1	-	559	0	0	2.9	75.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000042138	Msantd2	ENSMUST00000209769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042138	Msantd2	ENSMUST00000211060	ENSMUSP00000148195	TRANSLATION	protein_coding	-	-	3	358	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042138	Msantd2	ENSMUST00000213411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047562	Mmp10	ENSMUST00000034488	ENSMUSP00000034488	TRANSLATION	protein_coding	-	CCDS22807.1	1	476	28	9.6	1.5	416.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000094678	Olfr857	ENSMUST00000217450	ENSMUSP00000150889	TRANSLATION	protein_coding	-	-	3	309	0	0.32	0.5	166.6	4	-3,-5	-	-	8.952	MINOR
ENSMUSG00000094678	Olfr857	ENSMUST00000077023	ENSMUSP00000076281	TRANSLATION	protein_coding	-	CCDS52731.1	-	309	0	0.65	3.9	166.6	4	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094678	Olfr857	ENSMUST00000212013	ENSMUSP00000148617	TRANSLATION	protein_coding	-	CCDS52731.1	3	309	0	0.65	3.9	166.6	4	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000042444	Mindy2	ENSMUST00000213380	ENSMUSP00000150300	TRANSLATION	protein_coding	-	-	1	600	0	5.55	1.5	132	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042444	Mindy2	ENSMUST00000214293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042444	Mindy2	ENSMUST00000049031	ENSMUSP00000037035	TRANSLATION	protein_coding	-	CCDS40681.1	1	601	0	5.55	1.5	132	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000049526	Tmem202	ENSMUST00000055345	ENSMUSP00000053782	TRANSLATION	protein_coding	-	CCDS23249.1	1	275	0	0	1.5	27.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049526	Tmem202	ENSMUST00000216061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049526	Tmem202	ENSMUST00000214580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050803	Olfr866	ENSMUST00000062248	ENSMUSP00000054864	TRANSLATION	protein_coding	-	CCDS22868.1	-	312	0	0.42	1.5	160.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034007	Scaper	ENSMUST00000037408	ENSMUSP00000043411	TRANSLATION	protein_coding	-	CCDS52802.1	5	1398	4	0	0.5	24.4	0	-4,-2	-	-	10	PRINCIPAL:2
ENSMUSG00000034007	Scaper	ENSMUST00000215323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034007	Scaper	ENSMUST00000217647	ENSMUSP00000149750	TRANSLATION	protein_coding	-	CCDS52802.1	5	1398	4	0	0.5	24.4	0	-4,-2	-	-	10	PRINCIPAL:2
ENSMUSG00000034007	Scaper	ENSMUST00000214747	ENSMUSP00000149050	TRANSLATION	protein_coding	-	-	5	1392	4	0	0.5	24.4	0	-4,-2	-	-	10	ALTERNATIVE:2
ENSMUSG00000034007	Scaper	ENSMUST00000216595	ENSMUSP00000149836	TRANSLATION	protein_coding	-	-	1	905	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032034	Kcnj5	ENSMUST00000214223	ENSMUSP00000149000	TRANSLATION	protein_coding	-	CCDS22952.1	5	419	0	2	6.3	480.8	2	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032034	Kcnj5	ENSMUST00000216033	ENSMUSP00000149461	TRANSLATION	protein_coding	-	-	1	106	0	1	0	65.5	0	-4,-6	-	-	3	MINOR
ENSMUSG00000032034	Kcnj5	ENSMUST00000034533	ENSMUSP00000034533	TRANSLATION	protein_coding	-	CCDS22952.1	1	419	0	2	6.3	480.8	2	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070306	Ccdc153	ENSMUST00000217221	ENSMUSP00000149153	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070306	Ccdc153	ENSMUST00000215554	ENSMUSP00000150040	TRANSLATION	protein_coding	start	-	5	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070306	Ccdc153	ENSMUST00000092426	ENSMUSP00000090082	TRANSLATION	protein_coding	-	CCDS52778.1	2	202	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000070306	Ccdc153	ENSMUST00000213891	ENSMUSP00000149540	TRANSLATION	protein_coding	-	-	3	209	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000070306	Ccdc153	ENSMUST00000215711	ENSMUSP00000149025	TRANSLATION	protein_coding	start	-	5	172	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000070306	Ccdc153	ENSMUST00000216995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070306	Ccdc153	ENSMUST00000216047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070306	Ccdc153	ENSMUST00000217510	ENSMUSP00000151001	TRANSLATION	protein_coding	stop	-	5	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070306	Ccdc153	ENSMUST00000216632	ENSMUSP00000150478	TRANSLATION	protein_coding	-	-	2	187	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000032403	2300009A05Rik	ENSMUST00000187234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032403	2300009A05Rik	ENSMUST00000185528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032403	2300009A05Rik	ENSMUST00000186165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032403	2300009A05Rik	ENSMUST00000168665	ENSMUSP00000127596	TRANSLATION	protein_coding	-	CCDS52830.1	1	157	0	0	9.5	208	0	-3,1	-	-	9	PRINCIPAL:1
ENSMUSG00000062121	Olfr149	ENSMUST00000082027	ENSMUSP00000080686	TRANSLATION	protein_coding	-	CCDS23057.1	-	311	0	0.16	7.6	161.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062121	Olfr149	ENSMUST00000215192	ENSMUSP00000149664	TRANSLATION	protein_coding	-	CCDS23057.1	5	311	0	0.16	7.6	161.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066687	Zbtb16	ENSMUST00000216150	ENSMUSP00000150887	TRANSLATION	protein_coding	-	CCDS23158.1	1	673	35	3.75	7.5	199.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000066687	Zbtb16	ENSMUST00000093852	ENSMUSP00000091374	TRANSLATION	protein_coding	-	CCDS23158.1	1	673	35	3.75	7.5	199.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032555	Topbp1	ENSMUST00000188840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000185721	ENSMUSP00000140906	TRANSLATION	protein_coding	start/stop	-	3	257	0	2	0	38.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032555	Topbp1	ENSMUST00000185972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000187065	ENSMUSP00000139773	TRANSLATION	protein_coding	stop	-	5	130	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032555	Topbp1	ENSMUST00000035164	ENSMUSP00000035164	TRANSLATION	protein_coding	-	CCDS23453.1	1	1515	0	20.41	1.5	275.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032555	Topbp1	ENSMUST00000186897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000190712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000189349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000189631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032555	Topbp1	ENSMUST00000185305	ENSMUSP00000140862	TRANSLATION	nonsense_mediated_decay	start	-	3	66	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000217657	ENSMUSP00000149643	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000215426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000215298	ENSMUSP00000150452	TRANSLATION	protein_coding	-	-	1	166	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000213199	ENSMUSP00000150884	TRANSLATION	protein_coding	-	-	2	908	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000214583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032300	1700017B05Rik	ENSMUST00000034846	ENSMUSP00000034846	TRANSLATION	protein_coding	-	CCDS23219.1	1	1023	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000039962	Olfr906	ENSMUST00000045493	ENSMUSP00000039040	TRANSLATION	protein_coding	-	CCDS23013.1	-	311	0	0.2	5.1	169.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039962	Olfr906	ENSMUST00000214344	ENSMUSP00000151008	TRANSLATION	protein_coding	-	CCDS23013.1	3	311	0	0.2	5.1	169.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000018623	Mmp7	ENSMUST00000018767	ENSMUSP00000018767	TRANSLATION	protein_coding	-	CCDS40531.1	1	267	27	4.8	2.7	227.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000109564	Muc16	ENSMUST00000207509	ENSMUSP00000146740	TRANSLATION	protein_coding	start/stop	-	5	366	0	1.84	0	210	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000109564	Muc16	ENSMUST00000034653	ENSMUSP00000034653	TRANSLATION	protein_coding	-	-	2	258	0	2.75	0	96.8	0	-4,-7	-	-	2.322	MINOR
ENSMUSG00000109564	Muc16	ENSMUST00000208663	ENSMUSP00000147104	TRANSLATION	protein_coding	-	-	5	8478	0	4.59	0	1122	0	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000109564	Muc16	ENSMUST00000207857	ENSMUSP00000146623	TRANSLATION	protein_coding	start	-	5	2566	0	4.59	0	1282.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032598	Nckipsd	ENSMUST00000194413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032598	Nckipsd	ENSMUST00000192678	ENSMUSP00000141857	TRANSLATION	protein_coding	start	-	1	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032598	Nckipsd	ENSMUST00000195323	ENSMUSP00000141728	TRANSLATION	protein_coding	-	-	3	76	0	1.13	0	45.5	0	-4,-7	-	-	5.1	MINOR
ENSMUSG00000032598	Nckipsd	ENSMUST00000194819	ENSMUSP00000141702	TRANSLATION	protein_coding	stop	-	3	101	0	0.8	0	36.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032598	Nckipsd	ENSMUST00000192180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032598	Nckipsd	ENSMUST00000035218	ENSMUSP00000035218	TRANSLATION	protein_coding	-	CCDS23538.1	1	714	0	1.33	5.1	157.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032068	Plet1	ENSMUST00000114474	ENSMUSP00000110118	TRANSLATION	protein_coding	-	CCDS40619.1	1	237	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:2
ENSMUSG00000032068	Plet1	ENSMUST00000188047	ENSMUSP00000139422	TRANSLATION	protein_coding	-	-	1	194	0	0	0	0	0	2,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000042073	Abhd14b	ENSMUST00000187106	ENSMUSP00000139597	TRANSLATION	protein_coding	stop	-	3	142	6	2.75	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042073	Abhd14b	ENSMUST00000213179	ENSMUSP00000149694	TRANSLATION	protein_coding	-	CCDS23478.1	2	210	8	4.83	9.5	34.1	0	-4,-5	-	-	20.916	PRINCIPAL:1
ENSMUSG00000042073	Abhd14b	ENSMUST00000215475	ENSMUSP00000149469	TRANSLATION	protein_coding	stop	-	5	76	1	2.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042073	Abhd14b	ENSMUST00000186361	ENSMUSP00000141151	TRANSLATION	protein_coding	stop	-	3	194	8	4.33	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042073	Abhd14b	ENSMUST00000217496	ENSMUSP00000150948	TRANSLATION	protein_coding	-	-	5	96	2	2.83	0	0	0	-4,-7	-	-	3.498	MINOR
ENSMUSG00000042073	Abhd14b	ENSMUST00000185527	ENSMUSP00000139760	TRANSLATION	protein_coding	stop	-	2	174	7	3.83	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042073	Abhd14b	ENSMUST00000048527	ENSMUSP00000038755	TRANSLATION	protein_coding	-	CCDS23478.1	1	210	8	4.83	9.5	34.1	0	-4,-5	-	-	20.916	PRINCIPAL:1
ENSMUSG00000042073	Abhd14b	ENSMUST00000216130	ENSMUSP00000150885	TRANSLATION	protein_coding	-	CCDS23478.1	5	210	8	4.83	9.5	34.1	0	-4,-5	-	-	20.916	PRINCIPAL:1
ENSMUSG00000042073	Abhd14b	ENSMUST00000185347	ENSMUSP00000140279	TRANSLATION	protein_coding	-	CCDS23478.1	3	210	8	4.83	9.5	34.1	0	-4,-5	-	-	20.916	PRINCIPAL:1
ENSMUSG00000042073	Abhd14b	ENSMUST00000190167	ENSMUSP00000140655	TRANSLATION	protein_coding	stop	-	5	151	6	3.08	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004099	Dnmt1	ENSMUST00000214964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004099	Dnmt1	ENSMUST00000178110	ENSMUSP00000136669	TRANSLATION	protein_coding	-	CCDS57653.1	1	1501	38	26	0.5	351.8	0	-4,-7	-	-	13.692	MINOR
ENSMUSG00000004099	Dnmt1	ENSMUST00000216135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004099	Dnmt1	ENSMUST00000215545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004099	Dnmt1	ENSMUST00000177754	ENSMUSP00000136982	TRANSLATION	protein_coding	-	CCDS57653.1	1	1501	38	26	0.5	351.8	0	-4,-7	-	-	13.692	MINOR
ENSMUSG00000004099	Dnmt1	ENSMUST00000216540	ENSMUSP00000150433	TRANSLATION	protein_coding	-	CCDS57654.1	1	1502	38	26	0.5	351.8	0	-4,-7	-	-	13.692	MINOR
ENSMUSG00000004099	Dnmt1	ENSMUST00000004202	ENSMUSP00000004202	TRANSLATION	protein_coding	-	CCDS57655.1	1	1620	38	26	0.5	423.6	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000061559	Wdr61	ENSMUST00000127451	ENSMUSP00000119362	TRANSLATION	protein_coding	stop	-	3	107	0	2.83	0	52.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061559	Wdr61	ENSMUST00000051822	ENSMUSP00000056359	TRANSLATION	protein_coding	-	CCDS23194.1	1	305	0	8.16	15.3	195.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061559	Wdr61	ENSMUST00000148494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061559	Wdr61	ENSMUST00000121204	ENSMUSP00000113560	TRANSLATION	protein_coding	-	CCDS23194.1	1	305	0	8.16	15.3	195.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061559	Wdr61	ENSMUST00000118771	ENSMUSP00000112811	TRANSLATION	protein_coding	-	-	1	279	0	7.41	0	176.5	0	-4,-5	-	-	9.378	MINOR
ENSMUSG00000061559	Wdr61	ENSMUST00000144365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061559	Wdr61	ENSMUST00000130368	ENSMUSP00000123077	TRANSLATION	protein_coding	-	CCDS59747.1	1	207	0	5.83	3.5	141.7	0	-4,-5	-	-	4.828	MINOR
ENSMUSG00000032511	Scn5a	ENSMUST00000120420	ENSMUSP00000113272	TRANSLATION	protein_coding	-	-	5	2019	0	8.74	6.3	1221.7	4	-4,0	-	-	13.754	ALTERNATIVE:1
ENSMUSG00000032511	Scn5a	ENSMUST00000117911	ENSMUSP00000112838	TRANSLATION	protein_coding	-	CCDS52965.1	1	2020	0	8.74	5.1	1225.8	4	-4,0	-	-	13.548	PRINCIPAL:3
ENSMUSG00000032511	Scn5a	ENSMUST00000065196	ENSMUSP00000066228	TRANSLATION	protein_coding	-	CCDS57715.1	5	2020	0	8.74	5.1	1222	4	-4,0	-	-	13.32	ALTERNATIVE:1
ENSMUSG00000032511	Scn5a	ENSMUST00000138934	ENSMUSP00000118250	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000070323	Mmp27	ENSMUST00000151853	ENSMUSP00000117469	TRANSLATION	protein_coding	-	-	5	551	27	8.425	0	310.1	0	-3,-6	-	-	16.254	MINOR
ENSMUSG00000070323	Mmp27	ENSMUST00000120900	ENSMUSP00000113231	TRANSLATION	protein_coding	-	CCDS80952.1	1	525	27	8.8	0.5	326.7	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000070323	Mmp27	ENSMUST00000152878	ENSMUSP00000116263	TRANSLATION	protein_coding	start	-	1	470	23	7.8	0	248.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000025898	Cwf19l2	ENSMUST00000212128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025898	Cwf19l2	ENSMUST00000212101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025898	Cwf19l2	ENSMUST00000027027	ENSMUSP00000027027	TRANSLATION	protein_coding	-	CCDS22793.1	1	887	4	3	1.5	233.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025898	Cwf19l2	ENSMUST00000212644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031994	Adamts8	ENSMUST00000068135	ENSMUSP00000069644	TRANSLATION	protein_coding	-	CCDS22946.1	1	905	18	7.32	1.5	286.5	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031994	Adamts8	ENSMUST00000163037	ENSMUSP00000124848	TRANSLATION	nonsense_mediated_decay	start	-	1	142	3	1.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032246	Calml4	ENSMUST00000214633	ENSMUSP00000150476	TRANSLATION	protein_coding	-	-	3	76	9	1.83	0	0	0	-4,-5	-	-	7.398	MINOR
ENSMUSG00000032246	Calml4	ENSMUST00000163820	ENSMUSP00000132298	TRANSLATION	protein_coding	-	CCDS52827.1	2	106	9	2.63	0.5	17.9	0	-4,-5	-	-	11.01	MINOR
ENSMUSG00000032246	Calml4	ENSMUST00000215870	ENSMUSP00000148892	TRANSLATION	protein_coding	-	-	1	139	9	3.57	0	35.5	0	-4,-5	-	-	14.868	MINOR
ENSMUSG00000032246	Calml4	ENSMUST00000034777	ENSMUSP00000034777	TRANSLATION	protein_coding	-	CCDS40664.1	1	153	9	4.13	7.2	53.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032246	Calml4	ENSMUST00000215968	ENSMUSP00000149319	TRANSLATION	protein_coding	-	-	2	117	9	3.05	5.1	17.9	0	-4,-7	-	-	13.833	MINOR
ENSMUSG00000032246	Calml4	ENSMUST00000215119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032246	Calml4	ENSMUST00000213643	ENSMUSP00000150355	TRANSLATION	protein_coding	-	-	2	81	4	1.8	2.9	17.9	0	-4,-5	-	-	6.93	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000217476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032178	Ilf3	ENSMUST00000214217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032178	Ilf3	ENSMUST00000215438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032178	Ilf3	ENSMUST00000213603	ENSMUSP00000149483	TRANSLATION	protein_coding	-	-	5	911	4	16.9	0.5	458.6	0	-4,0	-	-	14.998	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000213518	ENSMUSP00000150280	TRANSLATION	protein_coding	-	-	1	908	4	16.9	0.5	458.6	0	-4,0	-	-	14.998	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000214758	ENSMUSP00000151032	TRANSLATION	protein_coding	-	-	5	911	4	16.9	0.5	458.6	0	-4,0	-	-	14.998	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000217498	ENSMUSP00000150164	TRANSLATION	nonsense_mediated_decay	start	-	5	214	2	4.33	0	98	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000214200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032178	Ilf3	ENSMUST00000217348	ENSMUSP00000149155	TRANSLATION	protein_coding	start	-	2	177	0	3.57	0	52.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000214821	ENSMUSP00000149321	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000214474	ENSMUSP00000148924	TRANSLATION	protein_coding	stop	-	3	77	0	1.83	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000216892	ENSMUSP00000149786	TRANSLATION	protein_coding	-	-	1	716	4	17.4	1.5	458.6	0	-4,0	-	-	16.232	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000214852	ENSMUSP00000150047	TRANSLATION	protein_coding	stop	-	3	168	2	3.91	0	68.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000067646	ENSMUSP00000065770	TRANSLATION	protein_coding	-	CCDS40552.1	1	898	4	16.9	2.9	458.6	0	-4,-7	-	-	15.882	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000215169	ENSMUSP00000150586	TRANSLATION	nonsense_mediated_decay	start	-	5	126	0	2	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032178	Ilf3	ENSMUST00000115414	ENSMUSP00000111074	TRANSLATION	protein_coding	-	CCDS40553.1	1	703	4	17.4	5.3	458.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000059623	Olfr39	ENSMUST00000071725	ENSMUSP00000071641	TRANSLATION	protein_coding	-	CCDS22875.2	2	319	0	0.32	0.5	172.3	6	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000059623	Olfr39	ENSMUST00000212983	ENSMUSP00000148572	TRANSLATION	protein_coding	-	-	2	311	0	0.32	4.8	172.3	6	-4,-7	-	-	13	ALTERNATIVE:1
ENSMUSG00000037742	Eef1a1	ENSMUST00000154207	ENSMUSP00000120438	TRANSLATION	protein_coding	stop	-	5	249	18	4.75	0	186.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037742	Eef1a1	ENSMUST00000042235	ENSMUSP00000042457	TRANSLATION	protein_coding	-	CCDS40703.1	1	462	18	8.08	21.5	376.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037742	Eef1a1	ENSMUST00000150960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037742	Eef1a1	ENSMUST00000156988	ENSMUSP00000116821	TRANSLATION	protein_coding	stop	-	1	186	15	3	0	172.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037742	Eef1a1	ENSMUST00000144523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037742	Eef1a1	ENSMUST00000143570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037742	Eef1a1	ENSMUST00000129380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037742	Eef1a1	ENSMUST00000126614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036986	Pml	ENSMUST00000135310	ENSMUSP00000122854	TRANSLATION	protein_coding	-	CCDS81007.1	1	632	13	1.4	0.5	580.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036986	Pml	ENSMUST00000148301	ENSMUSP00000120620	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000124982	ENSMUSP00000121380	TRANSLATION	protein_coding	stop	-	3	118	11	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000114136	ENSMUSP00000109771	TRANSLATION	protein_coding	-	CCDS23240.2	1	839	13	1.4	0.5	476.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000126690	ENSMUSP00000116787	TRANSLATION	protein_coding	start	-	5	578	13	1.4	0	476.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000085673	ENSMUSP00000082816	TRANSLATION	protein_coding	-	CCDS23239.1	1	885	13	1.4	0.5	580.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000036986	Pml	ENSMUST00000124063	ENSMUSP00000118232	TRANSLATION	protein_coding	start	-	5	124	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000148628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036986	Pml	ENSMUST00000138775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036986	Pml	ENSMUST00000154572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036986	Pml	ENSMUST00000130459	ENSMUSP00000121330	TRANSLATION	nonsense_mediated_decay	start	-	2	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036986	Pml	ENSMUST00000153820	ENSMUSP00000118955	TRANSLATION	protein_coding	-	-	1	641	13	1.4	0	580.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034342	Cbl	ENSMUST00000037644	ENSMUSP00000041902	TRANSLATION	protein_coding	-	-	1	869	14	11.73	1.5	550.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034342	Cbl	ENSMUST00000206163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034342	Cbl	ENSMUST00000206258	ENSMUSP00000145538	TRANSLATION	protein_coding	start	-	3	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034342	Cbl	ENSMUST00000206125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034342	Cbl	ENSMUST00000206720	ENSMUSP00000146244	TRANSLATION	protein_coding	-	CCDS40598.1	1	913	14	11.73	1.5	550.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000034342	Cbl	ENSMUST00000206629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034342	Cbl	ENSMUST00000205755	ENSMUSP00000145791	TRANSLATION	protein_coding	stop	-	5	51	0	1.33	0	66.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034342	Cbl	ENSMUST00000205313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034342	Cbl	ENSMUST00000206540	ENSMUSP00000145889	TRANSLATION	protein_coding	start	-	5	79	2	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034342	Cbl	ENSMUST00000206147	ENSMUSP00000145827	TRANSLATION	protein_coding	-	-	5	895	14	10.73	0	521.8	0	-4,-5	-	-	14.262	MINOR
ENSMUSG00000034342	Cbl	ENSMUST00000205968	ENSMUSP00000146287	TRANSLATION	protein_coding	-	-	1	896	11	11.23	0	546.3	0	-4,-5	-	-	14.73	MINOR
ENSMUSG00000025652	Tmem89	ENSMUST00000192852	ENSMUSP00000142016	TRANSLATION	protein_coding	-	-	-	140	0	0	0	153.1	1	3,-2	-	-	0.498	MINOR
ENSMUSG00000025652	Tmem89	ENSMUST00000026744	ENSMUSP00000026744	TRANSLATION	protein_coding	-	CCDS52928.1	1	169	0	0	0.5	244.8	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000064225	Paqr9	ENSMUST00000079597	ENSMUSP00000078547	TRANSLATION	protein_coding	-	CCDS23409.1	-	375	0	0.36	1.5	113.6	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000010057	Nprl2	ENSMUST00000192951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010057	Nprl2	ENSMUST00000010201	ENSMUSP00000010201	TRANSLATION	protein_coding	-	CCDS23492.1	1	380	0	0	17.3	301	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000010057	Nprl2	ENSMUST00000194848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010057	Nprl2	ENSMUST00000193628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010057	Nprl2	ENSMUST00000195370	ENSMUSP00000141746	TRANSLATION	nonsense_mediated_decay	-	-	3	163	0	0	0	108.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006241	Ccdc159	ENSMUST00000214734	ENSMUSP00000150744	TRANSLATION	nonsense_mediated_decay	-	-	2	267	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006241	Ccdc159	ENSMUST00000006403	ENSMUSP00000006403	TRANSLATION	protein_coding	-	CCDS40557.1	1	403	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000006241	Ccdc159	ENSMUST00000216710	ENSMUSP00000148950	TRANSLATION	protein_coding	-	-	5	280	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000006241	Ccdc159	ENSMUST00000170304	ENSMUSP00000126474	TRANSLATION	protein_coding	-	CCDS52738.1	1	411	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000006241	Ccdc159	ENSMUST00000217589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079469	Pigb	ENSMUST00000184389	ENSMUSP00000139076	TRANSLATION	protein_coding	-	CCDS40687.1	1	542	0	0	1.5	397.5	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079469	Pigb	ENSMUST00000098566	ENSMUSP00000096165	TRANSLATION	protein_coding	-	CCDS40687.1	1	542	0	0	1.5	397.5	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079469	Pigb	ENSMUST00000185027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079469	Pigb	ENSMUST00000183746	ENSMUSP00000138885	TRANSLATION	nonsense_mediated_decay	-	-	5	542	0	0	1.5	397.5	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000079469	Pigb	ENSMUST00000093819	ENSMUSP00000091337	TRANSLATION	protein_coding	-	-	1	120	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079469	Pigb	ENSMUST00000184035	ENSMUSP00000139269	TRANSLATION	protein_coding	-	CCDS40687.1	1	542	0	0	1.5	397.5	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079469	Pigb	ENSMUST00000183587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079469	Pigb	ENSMUST00000184776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079469	Pigb	ENSMUST00000183904	ENSMUSP00000138897	TRANSLATION	nonsense_mediated_decay	start	-	5	154	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047237	Fbxw21	ENSMUST00000198076	ENSMUSP00000143095	TRANSLATION	protein_coding	-	-	1	432	0	2.38	0.5	46.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000047237	Fbxw21	ENSMUST00000054925	ENSMUSP00000056358	TRANSLATION	protein_coding	-	CCDS23547.1	1	468	0	2.38	0.5	46.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000047237	Fbxw21	ENSMUST00000199540	ENSMUSP00000143200	TRANSLATION	protein_coding	stop	-	3	117	0	1.54	0	46.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047237	Fbxw21	ENSMUST00000197401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047990	C2cd4a	ENSMUST00000054500	ENSMUSP00000058286	TRANSLATION	protein_coding	-	CCDS52850.1	5	334	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000056131	Pgm3	ENSMUST00000070064	ENSMUSP00000070871	TRANSLATION	protein_coding	-	CCDS23381.1	1	542	18	9.855	8.8	62.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056131	Pgm3	ENSMUST00000190924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056131	Pgm3	ENSMUST00000187251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056131	Pgm3	ENSMUST00000186193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056131	Pgm3	ENSMUST00000072585	ENSMUSP00000072390	TRANSLATION	protein_coding	-	CCDS52877.1	1	501	18	8.855	1.7	62.5	0	-4,-5	-	-	16.272	MINOR
ENSMUSG00000032066	Bco2	ENSMUST00000119103	ENSMUSP00000112727	TRANSLATION	protein_coding	-	CCDS40620.1	5	532	4	10	1.5	379.9	0	-3,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000032584	Mst1r	ENSMUST00000195113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032584	Mst1r	ENSMUST00000035203	ENSMUSP00000035203	TRANSLATION	protein_coding	-	CCDS23509.1	1	1378	18	14.7	0.5	535.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032584	Mst1r	ENSMUST00000195617	ENSMUSP00000142201	TRANSLATION	nonsense_mediated_decay	-	-	1	442	0	1	0	116.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032584	Mst1r	ENSMUST00000194527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049555	Tmie	ENSMUST00000050958	ENSMUSP00000060148	TRANSLATION	protein_coding	-	CCDS23578.1	1	153	0	0	2.7	117.3	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000049555	Tmie	ENSMUST00000199189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049555	Tmie	ENSMUST00000198062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032500	Dclk3	ENSMUST00000111879	ENSMUSP00000107510	TRANSLATION	protein_coding	-	CCDS23585.2	1	790	18	3.2	0.5	322.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025240	Sacm1l	ENSMUST00000217045	ENSMUSP00000149326	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025240	Sacm1l	ENSMUST00000026270	ENSMUSP00000026270	TRANSLATION	protein_coding	-	CCDS40816.1	1	587	0	10.525	11	312.5	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025240	Sacm1l	ENSMUST00000239083	ENSMUSP00000159019	TRANSLATION	protein_coding	-	-	-	609	0	10.525	2.4	312.5	2	-4,-5	-	-	12.42	MINOR
ENSMUSG00000025240	Sacm1l	ENSMUST00000215004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025240	Sacm1l	ENSMUST00000238984	ENSMUSP00000158880	TRANSLATION	protein_coding	-	CCDS40816.1	-	587	0	10.525	11	312.5	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025240	Sacm1l	ENSMUST00000217089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094701	Olfr916	ENSMUST00000213714	ENSMUSP00000149017	TRANSLATION	protein_coding	-	CCDS23020.1	5	310	0	0.3	5.1	154.4	3	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094701	Olfr916	ENSMUST00000081196	ENSMUSP00000079959	TRANSLATION	protein_coding	-	CCDS23020.1	-	310	0	0.3	5.1	154.4	3	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094701	Olfr916	ENSMUST00000214093	ENSMUSP00000149578	TRANSLATION	protein_coding	-	CCDS23020.1	3	310	0	0.3	5.1	154.4	3	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032492	Pth1r	ENSMUST00000196057	ENSMUSP00000143470	TRANSLATION	protein_coding	stop	-	5	197	0	4.75	0	70.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032492	Pth1r	ENSMUST00000199791	ENSMUSP00000142957	TRANSLATION	protein_coding	stop	-	5	54	3	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000032492	Pth1r	ENSMUST00000006005	ENSMUSP00000006005	TRANSLATION	protein_coding	-	CCDS52940.1	1	591	0	9.704	3.9	373.5	6	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000032492	Pth1r	ENSMUST00000198865	ENSMUSP00000143298	TRANSLATION	protein_coding	-	CCDS52940.1	1	591	0	9.704	3.9	373.5	6	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000032492	Pth1r	ENSMUST00000166716	ENSMUSP00000132064	TRANSLATION	protein_coding	-	CCDS52940.1	1	591	0	9.704	3.9	373.5	6	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000032492	Pth1r	ENSMUST00000199862	ENSMUSP00000142672	TRANSLATION	protein_coding	stop	-	5	198	0	5.08	0	70.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032067	Pts	ENSMUST00000214512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032067	Pts	ENSMUST00000217146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032067	Pts	ENSMUST00000216201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032067	Pts	ENSMUST00000216836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032067	Pts	ENSMUST00000214213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032067	Pts	ENSMUST00000214873	ENSMUSP00000150693	TRANSLATION	protein_coding	-	-	5	77	6	2.33	0	69.1	0	-4,-5	-	-	7.188	MINOR
ENSMUSG00000032067	Pts	ENSMUST00000213640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032067	Pts	ENSMUST00000213144	ENSMUSP00000149239	TRANSLATION	protein_coding	stop	-	3	23	2	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032067	Pts	ENSMUST00000034570	ENSMUSP00000034570	TRANSLATION	protein_coding	-	CCDS23164.1	1	144	11	4.49	5.1	121.7	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000032067	Pts	ENSMUST00000216197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032067	Pts	ENSMUST00000214907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032067	Pts	ENSMUST00000215416	ENSMUSP00000149552	TRANSLATION	protein_coding	-	-	2	77	6	2.33	0	69.1	0	-4,-5	-	-	7.188	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000196954	ENSMUSP00000143599	TRANSLATION	protein_coding	-	-	3	133	4	0	1.5	97.6	5	-1,-5	-	-	6.4	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000197483	ENSMUSP00000143613	TRANSLATION	protein_coding	-	-	3	133	4	0	1.5	97.6	5	-1,-5	-	-	6.4	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000197194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025647	Shisa5	ENSMUST00000200515	ENSMUSP00000142835	TRANSLATION	protein_coding	-	-	1	171	4	0	0	112.5	5	-4,-2	-	-	7.294	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000026737	ENSMUSP00000026737	TRANSLATION	protein_coding	-	CCDS23543.1	1	235	4	0	0.5	157.6	5	4,-1	-	-	10	PRINCIPAL:3
ENSMUSG00000025647	Shisa5	ENSMUST00000198376	ENSMUSP00000143374	TRANSLATION	protein_coding	stop	-	2	83	4	0	0	83.9	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000198639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025647	Shisa5	ENSMUST00000198591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025647	Shisa5	ENSMUST00000199868	ENSMUSP00000142867	TRANSLATION	protein_coding	start	-	1	137	4	0	0	99.4	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000200629	ENSMUSP00000142404	TRANSLATION	protein_coding	stop	-	2	72	4	0	0	67.5	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000112059	ENSMUSP00000107690	TRANSLATION	protein_coding	-	CCDS72309.1	1	236	4	0	0.5	157.3	5	4,-1	-	-	9.982	ALTERNATIVE:2
ENSMUSG00000025647	Shisa5	ENSMUST00000197099	ENSMUSP00000143648	TRANSLATION	protein_coding	-	-	3	167	4	0	0	115	5	-4,-6	-	-	7.444	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000199288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025647	Shisa5	ENSMUST00000200366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025647	Shisa5	ENSMUST00000198295	ENSMUSP00000143721	TRANSLATION	protein_coding	stop	-	3	70	4	0	0	64.5	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000198708	ENSMUSP00000142978	TRANSLATION	protein_coding	-	-	5	133	4	0	1.5	97.6	5	-1,-5	-	-	6.4	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000198281	ENSMUSP00000143581	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	40.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000197689	ENSMUSP00000142874	TRANSLATION	protein_coding	stop	-	5	63	4	0	0	59.2	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000025647	Shisa5	ENSMUST00000154184	ENSMUSP00000128901	TRANSLATION	protein_coding	-	CCDS40771.1	1	132	4	0	1.5	97.6	5	-1,-5	-	-	6.4	MINOR
ENSMUSG00000005800	Mmp8	ENSMUST00000018765	ENSMUSP00000018765	TRANSLATION	protein_coding	-	CCDS22808.1	1	465	29	8.74	1.5	399.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000079681	Zglp1	ENSMUST00000216967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079681	Zglp1	ENSMUST00000115494	ENSMUSP00000111157	TRANSLATION	protein_coding	-	CCDS40549.1	1	266	7	1	0.5	53.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025646	Atrip	ENSMUST00000160928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025646	Atrip	ENSMUST00000160217	ENSMUSP00000125264	TRANSLATION	nonsense_mediated_decay	-	-	2	585	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025646	Atrip	ENSMUST00000161270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025646	Atrip	ENSMUST00000159614	ENSMUSP00000124854	TRANSLATION	protein_coding	start/stop	-	3	180	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000025646	Atrip	ENSMUST00000045011	ENSMUSP00000044831	TRANSLATION	protein_coding	-	CCDS23545.1	1	785	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000025646	Atrip	ENSMUST00000161521	ENSMUSP00000125615	TRANSLATION	protein_coding	-	-	5	758	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000025646	Atrip	ENSMUST00000128062	ENSMUSP00000118499	TRANSLATION	protein_coding	start	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025646	Atrip	ENSMUST00000161163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025646	Atrip	ENSMUST00000194199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032375	Aph1b	ENSMUST00000113730	ENSMUSP00000109359	TRANSLATION	protein_coding	-	-	5	216	0	4.6	3.4	215.6	8	1,-3	-	-	6.276	MINOR
ENSMUSG00000032375	Aph1b	ENSMUST00000034934	ENSMUSP00000034934	TRANSLATION	protein_coding	-	CCDS23307.1	1	257	0	5.6	5.1	297.2	11	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000032375	Aph1b	ENSMUST00000168309	ENSMUSP00000125816	TRANSLATION	nonsense_mediated_decay	-	-	1	212	0	3.6	0	210.4	6	1,-3	-	-	-1	MINOR
ENSMUSG00000032217	Rnf111	ENSMUST00000034739	ENSMUSP00000034739	TRANSLATION	protein_coding	-	CCDS23321.1	1	989	8	3	2.7	412.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000032217	Rnf111	ENSMUST00000213694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032217	Rnf111	ENSMUST00000113595	ENSMUSP00000109225	TRANSLATION	protein_coding	-	CCDS23321.1	5	989	8	3	2.7	412.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000032217	Rnf111	ENSMUST00000213208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032217	Rnf111	ENSMUST00000215848	ENSMUSP00000149445	TRANSLATION	protein_coding	-	-	1	981	8	3	1.7	412.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032217	Rnf111	ENSMUST00000215948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032217	Rnf111	ENSMUST00000213647	ENSMUSP00000149501	TRANSLATION	protein_coding	-	-	1	980	8	3	1.7	412.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032217	Rnf111	ENSMUST00000213996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096167	Olfr887	ENSMUST00000074681	ENSMUSP00000074248	TRANSLATION	protein_coding	-	CCDS22996.1	-	309	0	0.96	5.1	166.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000096167	Olfr887	ENSMUST00000212502	ENSMUSP00000148361	TRANSLATION	protein_coding	-	CCDS22996.1	5	309	0	0.96	5.1	166.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000096167	Olfr887	ENSMUST00000213091	ENSMUSP00000148346	TRANSLATION	protein_coding	stop	-	-	101	0	0	0	37	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000038119	Cdon	ENSMUST00000137200	ENSMUSP00000116553	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000038119	Cdon	ENSMUST00000042842	ENSMUSP00000045547	TRANSLATION	protein_coding	-	CCDS22964.1	1	1250	0	12.7	0.5	361.9	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038119	Cdon	ENSMUST00000154652	ENSMUSP00000117499	TRANSLATION	protein_coding	stop	-	1	670	0	8.78	0	275.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000038119	Cdon	ENSMUST00000127264	ENSMUSP00000115216	TRANSLATION	protein_coding	start/stop	-	3	218	0	2.8	0	84.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038119	Cdon	ENSMUST00000151682	ENSMUSP00000119206	TRANSLATION	protein_coding	stop	-	5	178	0	2.09	0	42.3	0	2,-3	-	-	-1	MINOR
ENSMUSG00000038119	Cdon	ENSMUST00000119129	ENSMUSP00000113977	TRANSLATION	protein_coding	-	CCDS22964.1	5	1250	0	12.7	0.5	361.9	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000074452	Pate2	ENSMUST00000217565	ENSMUSP00000149433	TRANSLATION	protein_coding	start	-	5	108	0	0	1.5	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000074452	Pate2	ENSMUST00000098906	ENSMUSP00000096505	TRANSLATION	protein_coding	-	-	2	149	0	0	0	0	0	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000074452	Pate2	ENSMUST00000137309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074452	Pate2	ENSMUST00000118254	ENSMUSP00000113239	TRANSLATION	protein_coding	-	CCDS52756.1	1	111	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000074452	Pate2	ENSMUST00000173488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036943	Rab8b	ENSMUST00000041139	ENSMUSP00000041857	TRANSLATION	protein_coding	-	CCDS23309.1	1	207	22	6.5	21.5	226	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000074183	Gsta1	ENSMUST00000098537	ENSMUSP00000096139	TRANSLATION	protein_coding	-	CCDS23358.1	1	223	10	5.25	7.5	144.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000074183	Gsta1	ENSMUST00000127192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002031	Ift46	ENSMUST00000147559	ENSMUSP00000118412	TRANSLATION	protein_coding	stop	-	5	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002031	Ift46	ENSMUST00000125877	ENSMUSP00000122682	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	91.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002031	Ift46	ENSMUST00000214854	ENSMUSP00000149271	TRANSLATION	protein_coding	stop	-	3	188	0	0	0	205.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002031	Ift46	ENSMUST00000133167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002031	Ift46	ENSMUST00000238800	ENSMUSP00000158916	TRANSLATION	protein_coding	-	-	-	352	0	2.305	0	343	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002031	Ift46	ENSMUST00000151905	ENSMUSP00000116729	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002031	Ift46	ENSMUST00000128150	ENSMUSP00000120480	TRANSLATION	protein_coding	stop	-	5	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002031	Ift46	ENSMUST00000002099	ENSMUSP00000002099	TRANSLATION	protein_coding	-	CCDS23119.1	1	301	0	2.305	1.5	343	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002031	Ift46	ENSMUST00000118186	ENSMUSP00000113845	TRANSLATION	protein_coding	-	CCDS23119.1	1	301	0	2.305	1.5	343	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002031	Ift46	ENSMUST00000154090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002031	Ift46	ENSMUST00000143654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002031	Ift46	ENSMUST00000142586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002031	Ift46	ENSMUST00000149020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002031	Ift46	ENSMUST00000239014	ENSMUSP00000159011	TRANSLATION	protein_coding	-	CCDS23119.1	-	301	0	2.305	1.5	343	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002031	Ift46	ENSMUST00000124534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039952	Dag1	ENSMUST00000171412	ENSMUSP00000130626	TRANSLATION	protein_coding	-	CCDS23518.1	1	893	0	1.6	7.5	518.3	1	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000039952	Dag1	ENSMUST00000195429	ENSMUSP00000141385	TRANSLATION	protein_coding	stop	-	2	38	0	0	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000039952	Dag1	ENSMUST00000193701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039952	Dag1	ENSMUST00000194698	ENSMUSP00000141921	TRANSLATION	protein_coding	stop	-	2	25	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000039952	Dag1	ENSMUST00000166905	ENSMUSP00000128531	TRANSLATION	protein_coding	-	CCDS23518.1	1	893	0	1.6	7.5	518.3	1	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000039952	Dag1	ENSMUST00000080435	ENSMUSP00000079294	TRANSLATION	protein_coding	-	CCDS23518.1	1	893	0	1.6	7.5	518.3	1	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000039952	Dag1	ENSMUST00000191899	ENSMUSP00000142109	TRANSLATION	protein_coding	-	CCDS23518.1	1	893	0	1.6	7.5	518.3	1	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000049313	Sorl1	ENSMUST00000060989	ENSMUSP00000058613	TRANSLATION	protein_coding	-	CCDS40594.1	1	2215	28	32.735	3.9	1075.3	0	3,2	-	-	19	PRINCIPAL:1
ENSMUSG00000049313	Sorl1	ENSMUST00000148800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049313	Sorl1	ENSMUST00000139133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049313	Sorl1	ENSMUST00000134560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032437	Stt3b	ENSMUST00000035010	ENSMUSP00000035010	TRANSLATION	protein_coding	-	CCDS23599.1	1	823	0	5.04	0.5	491.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032519	Slc25a38	ENSMUST00000154969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032519	Slc25a38	ENSMUST00000135514	ENSMUSP00000121747	TRANSLATION	protein_coding	stop	-	3	243	0	2.86	0	139.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032519	Slc25a38	ENSMUST00000035106	ENSMUSP00000035106	TRANSLATION	protein_coding	-	CCDS23622.1	1	326	0	3.58	1.5	197.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032519	Slc25a38	ENSMUST00000150093	ENSMUSP00000123357	TRANSLATION	nonsense_mediated_decay	-	-	5	138	0	1.2	0	55.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032519	Slc25a38	ENSMUST00000137522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032519	Slc25a38	ENSMUST00000144768	ENSMUSP00000121454	TRANSLATION	nonsense_mediated_decay	-	-	5	195	0	1.2	0	55.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032519	Slc25a38	ENSMUST00000139079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042761	Mrap2	ENSMUST00000049457	ENSMUSP00000046271	TRANSLATION	protein_coding	-	CCDS52878.1	3	207	0	0	8.8	118.7	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000042761	Mrap2	ENSMUST00000179313	ENSMUSP00000135904	TRANSLATION	protein_coding	-	CCDS52878.1	2	207	0	0	8.8	118.7	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000042761	Mrap2	ENSMUST00000113149	ENSMUSP00000108774	TRANSLATION	protein_coding	-	CCDS52878.1	5	207	0	0	8.8	118.7	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000039716	Dock3	ENSMUST00000167053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039716	Dock3	ENSMUST00000165562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039716	Dock3	ENSMUST00000166759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039716	Dock3	ENSMUST00000170193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039716	Dock3	ENSMUST00000166152	ENSMUSP00000131701	TRANSLATION	protein_coding	start/stop	-	5	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039716	Dock3	ENSMUST00000165182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039716	Dock3	ENSMUST00000171095	ENSMUSP00000127059	TRANSLATION	protein_coding	start	-	1	552	0	3.6	0	184.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039716	Dock3	ENSMUST00000044532	ENSMUSP00000047652	TRANSLATION	protein_coding	-	CCDS40760.1	2	2030	0	16.8	6.3	1043.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039716	Dock3	ENSMUST00000168759	ENSMUSP00000131410	TRANSLATION	protein_coding	start/stop	-	5	241	0	3.6	0	157.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039716	Dock3	ENSMUST00000169164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039716	Dock3	ENSMUST00000165075	ENSMUSP00000130873	TRANSLATION	protein_coding	start/stop	-	3	241	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000032289	Thsd4	ENSMUST00000098660	ENSMUSP00000096257	TRANSLATION	protein_coding	-	CCDS40661.1	1	1018	3	3.24	1.5	294.7	0	3,-2	-	-	15.188	PRINCIPAL:1
ENSMUSG00000032289	Thsd4	ENSMUST00000171654	ENSMUSP00000131418	TRANSLATION	protein_coding	-	CCDS40661.1	5	1018	3	3.24	1.5	294.7	0	3,-2	-	-	15.188	PRINCIPAL:1
ENSMUSG00000032289	Thsd4	ENSMUST00000034829	ENSMUSP00000034829	TRANSLATION	protein_coding	-	CCDS23256.1	1	658	3	1.8	6.3	272.9	0	1,-3	-	-	12.812	MINOR
ENSMUSG00000032289	Thsd4	ENSMUST00000140824	ENSMUSP00000123323	TRANSLATION	protein_coding	stop	-	3	134	0	0.6	0	21.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032289	Thsd4	ENSMUST00000146099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032289	Thsd4	ENSMUST00000126347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090738	Pate7	ENSMUST00000171898	ENSMUSP00000129553	TRANSLATION	protein_coding	-	CCDS52759.1	5	109	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000057349	Olfr948	ENSMUST00000076516	ENSMUSP00000075834	TRANSLATION	protein_coding	-	CCDS23043.1	-	321	0	0.2	1.5	167.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057349	Olfr948	ENSMUST00000216132	ENSMUSP00000149422	TRANSLATION	protein_coding	-	CCDS23043.1	5	321	0	0.2	1.5	167.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000010045	Tmem115	ENSMUST00000010189	ENSMUSP00000010189	TRANSLATION	protein_coding	-	CCDS23490.1	1	350	0	0	7.5	100.4	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000042293	Gm5617	ENSMUST00000048824	ENSMUSP00000040380	TRANSLATION	protein_coding	-	CCDS52787.1	-	117	0	0	1.5	139.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000038691	Mbd3l1	ENSMUST00000215255	ENSMUSP00000149425	TRANSLATION	protein_coding	-	CCDS22845.1	3	186	0	0	0.5	166	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038691	Mbd3l1	ENSMUST00000213625	ENSMUSP00000149619	TRANSLATION	protein_coding	-	CCDS22845.1	1	186	0	0	0.5	166	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038691	Mbd3l1	ENSMUST00000069218	ENSMUSP00000063957	TRANSLATION	protein_coding	-	CCDS22845.1	1	186	0	0	0.5	166	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041986	Elmod1	ENSMUST00000216880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041986	Elmod1	ENSMUST00000215313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041986	Elmod1	ENSMUST00000213111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041986	Elmod1	ENSMUST00000048409	ENSMUSP00000046191	TRANSLATION	protein_coding	-	CCDS57678.1	1	326	0	0	12.8	158.3	0	-3,-7	-	-	10	PRINCIPAL:2
ENSMUSG00000041986	Elmod1	ENSMUST00000166580	ENSMUSP00000129082	TRANSLATION	protein_coding	-	-	5	326	0	0	12.8	158.3	0	-4,-6	-	-	10	ALTERNATIVE:1
ENSMUSG00000032517	Mobp	ENSMUST00000111627	ENSMUSP00000107254	TRANSLATION	protein_coding	-	CCDS40808.1	2	81	2	0	3.9	44.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032517	Mobp	ENSMUST00000215512	ENSMUSP00000149831	TRANSLATION	protein_coding	-	-	2	69	2	0	0	42.9	0	-4,-7	-	-	7.784	MINOR
ENSMUSG00000032517	Mobp	ENSMUST00000174193	ENSMUSP00000134410	TRANSLATION	nonsense_mediated_decay	-	-	1	81	2	0	3.9	44.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032517	Mobp	ENSMUST00000068698	ENSMUSP00000071084	TRANSLATION	protein_coding	-	CCDS23626.1	1	170	2	0	1.5	39.4	0	-4,-7	-	-	7.482	MINOR
ENSMUSG00000032517	Mobp	ENSMUST00000093773	ENSMUSP00000091287	TRANSLATION	protein_coding	-	CCDS40808.1	1	81	2	0	3.9	44.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032517	Mobp	ENSMUST00000214943	ENSMUSP00000149285	TRANSLATION	protein_coding	-	CCDS40808.1	3	81	2	0	3.9	44.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000032517	Mobp	ENSMUST00000214008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049699	Ucn2	ENSMUST00000052724	ENSMUSP00000060405	TRANSLATION	protein_coding	-	CCDS52929.1	-	113	0	0	2.7	55.8	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000049864	Olfr250	ENSMUST00000216168	ENSMUSP00000150432	TRANSLATION	protein_coding	-	-	5	321	0	0.2	0	156.1	5	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000049864	Olfr250	ENSMUST00000052085	ENSMUSP00000051631	TRANSLATION	protein_coding	-	CCDS57670.1	-	331	0	0.2	0.5	156.1	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000047880	Cxcr5	ENSMUST00000062215	ENSMUSP00000050444	TRANSLATION	protein_coding	-	CCDS23115.1	1	374	0	1.22	1.5	173.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047880	Cxcr5	ENSMUST00000215293	ENSMUSP00000149508	TRANSLATION	protein_coding	-	CCDS23115.1	1	374	0	1.22	1.5	173.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047880	Cxcr5	ENSMUST00000215661	ENSMUSP00000149400	TRANSLATION	protein_coding	stop	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047880	Cxcr5	ENSMUST00000213357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047880	Cxcr5	ENSMUST00000179828	ENSMUSP00000137518	TRANSLATION	protein_coding	-	CCDS23115.1	5	374	0	1.22	1.5	173.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038535	Zfp280d	ENSMUST00000184248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000184968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038535	Zfp280d	ENSMUST00000184216	ENSMUSP00000139127	TRANSLATION	protein_coding	start	-	3	136	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000184025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000184053	ENSMUSP00000138848	TRANSLATION	nonsense_mediated_decay	-	-	1	148	0	0	0	139.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000184786	ENSMUSP00000139052	TRANSLATION	nonsense_mediated_decay	start	-	5	180	0	0	0	200.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000183410	ENSMUSP00000139250	TRANSLATION	protein_coding	-	CCDS81035.1	1	799	32	1.64	0.5	265	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038535	Zfp280d	ENSMUST00000183459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000098576	ENSMUSP00000096175	TRANSLATION	protein_coding	-	CCDS40683.1	1	974	32	1.64	0.5	265	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000038535	Zfp280d	ENSMUST00000184399	ENSMUSP00000138902	TRANSLATION	nonsense_mediated_decay	-	-	1	103	0	0	0	68.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000183468	ENSMUSP00000139209	TRANSLATION	protein_coding	-	-	1	218	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000183545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000183608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038535	Zfp280d	ENSMUST00000184639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038535	Zfp280d	ENSMUST00000184019	ENSMUSP00000138994	TRANSLATION	protein_coding	start/stop	-	5	172	7	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000185020	ENSMUSP00000138817	TRANSLATION	nonsense_mediated_decay	start	-	5	92	3	0	0	30.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000184141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000183801	ENSMUSP00000139091	TRANSLATION	nonsense_mediated_decay	-	-	1	529	25	1.64	0	265	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038535	Zfp280d	ENSMUST00000184517	ENSMUSP00000138970	TRANSLATION	protein_coding	-	-	1	787	32	1.64	0.5	265	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038535	Zfp280d	ENSMUST00000183400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038535	Zfp280d	ENSMUST00000184036	ENSMUSP00000138857	TRANSLATION	protein_coding	-	-	5	949	32	1.64	0.5	265	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000043923	Ccdc84	ENSMUST00000215402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043923	Ccdc84	ENSMUST00000214494	ENSMUSP00000151113	TRANSLATION	nonsense_mediated_decay	-	-	5	194	4	0	0	181	0	-4,0	-	-	-1	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000214702	ENSMUSP00000151118	TRANSLATION	nonsense_mediated_decay	-	-	5	194	4	0	0	181	0	-4,0	-	-	-1	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000214748	ENSMUSP00000148979	TRANSLATION	protein_coding	start	-	3	194	4	0	0	181	0	-4,0	-	-	-1	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000216572	ENSMUSP00000149229	TRANSLATION	protein_coding	stop	-	5	161	4	0	0	163	0	-4,0	-	-	-1	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000053286	ENSMUSP00000053216	TRANSLATION	protein_coding	-	CCDS23110.1	1	332	4	0	5.1	318.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000043923	Ccdc84	ENSMUST00000216134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043923	Ccdc84	ENSMUST00000215111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043923	Ccdc84	ENSMUST00000217270	ENSMUSP00000150949	TRANSLATION	protein_coding	-	-	1	194	4	0	0	181	0	-4,0	-	-	4	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000213813	ENSMUSP00000148874	TRANSLATION	protein_coding	-	-	1	185	4	0	0	181	0	-4,0	-	-	4	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000217351	ENSMUSP00000149682	TRANSLATION	protein_coding	-	-	3	194	4	0	0	181	0	-4,0	-	-	4	MINOR
ENSMUSG00000043923	Ccdc84	ENSMUST00000214370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048391	Olfr843	ENSMUST00000214019	ENSMUSP00000150008	TRANSLATION	protein_coding	-	CCDS22853.1	5	313	0	0.42	1.5	173.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048391	Olfr843	ENSMUST00000061365	ENSMUSP00000051027	TRANSLATION	protein_coding	-	CCDS22853.1	-	313	0	0.42	1.5	173.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048391	Olfr843	ENSMUST00000214267	ENSMUSP00000151203	TRANSLATION	protein_coding	-	CCDS22853.1	5	313	0	0.42	1.5	173.3	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032402	Smad3	ENSMUST00000034973	ENSMUSP00000034973	TRANSLATION	protein_coding	-	CCDS23272.1	1	425	4	7.824	15.5	413.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032402	Smad3	ENSMUST00000137713	ENSMUSP00000121671	TRANSLATION	protein_coding	stop	-	3	113	0	2.324	0	112	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032402	Smad3	ENSMUST00000154323	ENSMUSP00000116790	TRANSLATION	protein_coding	stop	-	5	233	3	3.744	0	197.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032402	Smad3	ENSMUST00000133108	ENSMUSP00000122217	TRANSLATION	protein_coding	start/stop	-	5	143	4	1.948	0	101	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032402	Smad3	ENSMUST00000137065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055820	Olfr967	ENSMUST00000069561	ENSMUSP00000064201	TRANSLATION	protein_coding	-	CCDS23059.1	-	310	0	0	6.4	168.7	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000055820	Olfr967	ENSMUST00000213358	ENSMUSP00000150183	TRANSLATION	protein_coding	-	CCDS23059.1	5	310	0	0	6.4	168.7	5	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031997	Trpc6	ENSMUST00000217462	ENSMUSP00000150193	TRANSLATION	protein_coding	-	-	1	406	0	0.36	0.5	127.4	0	-4,-2	-	-	1.74	MINOR
ENSMUSG00000031997	Trpc6	ENSMUST00000214596	ENSMUSP00000149686	TRANSLATION	protein_coding	-	-	1	852	0	1.24	0.5	215.7	6	-4,-2	-	-	10.014	MINOR
ENSMUSG00000031997	Trpc6	ENSMUST00000050433	ENSMUSP00000057965	TRANSLATION	protein_coding	-	CCDS22815.1	1	930	0	1.24	5.1	248.8	7	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000066368	Actl11	ENSMUST00000085073	ENSMUSP00000082150	TRANSLATION	protein_coding	-	CCDS23510.1	-	1207	19	0.2	0.5	279.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000010048	Ifrd2	ENSMUST00000192888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010048	Ifrd2	ENSMUST00000010192	ENSMUSP00000010192	TRANSLATION	protein_coding	-	CCDS23500.1	1	441	0	0	2.7	410.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000010048	Ifrd2	ENSMUST00000193153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010048	Ifrd2	ENSMUST00000193140	ENSMUSP00000141351	TRANSLATION	nonsense_mediated_decay	start	-	3	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010048	Ifrd2	ENSMUST00000195725	ENSMUSP00000141718	TRANSLATION	nonsense_mediated_decay	-	-	3	147	0	0	0	78	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010048	Ifrd2	ENSMUST00000194932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010048	Ifrd2	ENSMUST00000195746	ENSMUSP00000142217	TRANSLATION	protein_coding	start	-	5	149	0	0	0	135	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079162	Trim43b	ENSMUST00000189557	ENSMUSP00000139457	TRANSLATION	protein_coding	-	-	1	444	8	2.558	0.5	30.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000079162	Trim43b	ENSMUST00000167113	ENSMUSP00000126594	TRANSLATION	protein_coding	-	CCDS52884.1	1	445	8	2.558	0.5	30.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000032087	Dscaml1	ENSMUST00000239429	ENSMUSP00000159287	TRANSLATION	protein_coding	-	CCDS40608.1	-	2111	0	19.246	3.9	630.7	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000032087	Dscaml1	ENSMUST00000239471	ENSMUSP00000159348	TRANSLATION	protein_coding	-	CCDS40608.1	-	2111	0	19.246	3.9	630.7	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000032087	Dscaml1	ENSMUST00000217538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032087	Dscaml1	ENSMUST00000215027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032087	Dscaml1	ENSMUST00000214151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032087	Dscaml1	ENSMUST00000216685	ENSMUSP00000149247	TRANSLATION	nonsense_mediated_decay	start	-	1	286	0	4.616	0	138.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032087	Dscaml1	ENSMUST00000213919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032087	Dscaml1	ENSMUST00000216340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032087	Dscaml1	ENSMUST00000217335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032087	Dscaml1	ENSMUST00000216078	ENSMUSP00000148905	TRANSLATION	nonsense_mediated_decay	start	-	5	34	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032087	Dscaml1	ENSMUST00000034592	ENSMUSP00000034592	TRANSLATION	protein_coding	-	-	1	2053	0	19.246	0	630.7	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000032410	Xrn1	ENSMUST00000034981	ENSMUSP00000034981	TRANSLATION	protein_coding	-	CCDS40728.1	1	1723	4	21.035	0.5	322.2	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000032410	Xrn1	ENSMUST00000189106	ENSMUSP00000140004	TRANSLATION	protein_coding	stop	-	5	40	0	1.25	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032410	Xrn1	ENSMUST00000187175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032410	Xrn1	ENSMUST00000187359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032410	Xrn1	ENSMUST00000189806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032410	Xrn1	ENSMUST00000185759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032410	Xrn1	ENSMUST00000189612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032410	Xrn1	ENSMUST00000190665	ENSMUSP00000139510	TRANSLATION	protein_coding	-	-	1	969	4	18.275	0	322.2	0	-4,-6	-	-	10.48	MINOR
ENSMUSG00000032410	Xrn1	ENSMUST00000185633	ENSMUSP00000140278	TRANSLATION	protein_coding	-	CCDS81053.1	1	1719	4	21.035	0.5	322.2	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000037112	Sik2	ENSMUST00000068484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037112	Sik2	ENSMUST00000176491	ENSMUSP00000134954	TRANSLATION	nonsense_mediated_decay	-	-	1	929	18	6.55	0.5	249.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037112	Sik2	ENSMUST00000176663	ENSMUSP00000135376	TRANSLATION	protein_coding	-	-	5	929	18	6.55	0.5	249.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000037112	Sik2	ENSMUST00000177203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037112	Sik2	ENSMUST00000176824	ENSMUSP00000134936	TRANSLATION	protein_coding	-	-	5	927	18	6.55	0	249.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000037112	Sik2	ENSMUST00000177346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037112	Sik2	ENSMUST00000176327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037112	Sik2	ENSMUST00000041375	ENSMUSP00000038761	TRANSLATION	protein_coding	-	CCDS40627.1	1	931	18	6.55	0.5	249.4	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000096409	Olfr890	ENSMUST00000079804	ENSMUSP00000078733	TRANSLATION	protein_coding	-	CCDS22998.1	-	314	0	0.32	1.5	163.5	4	-4,-7	-	-	12.244	MINOR
ENSMUSG00000096409	Olfr890	ENSMUST00000213458	ENSMUSP00000149829	TRANSLATION	protein_coding	-	-	5	309	0	0.32	5.1	163.5	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000062868	Olfr830	ENSMUST00000212723	ENSMUSP00000148394	TRANSLATION	protein_coding	-	-	5	312	0	0.48	2.7	173.7	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000062868	Olfr830	ENSMUST00000078861	ENSMUSP00000077903	TRANSLATION	protein_coding	-	CCDS22848.1	-	315	0	0.48	2.7	173.7	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000032239	Rp9	ENSMUST00000215715	ENSMUSP00000150271	TRANSLATION	protein_coding	-	-	1	156	4	0	0	0	0	-4,-7	-	-	4	ALTERNATIVE:2
ENSMUSG00000032239	Rp9	ENSMUST00000034763	ENSMUSP00000034763	TRANSLATION	protein_coding	-	CCDS40564.1	1	213	4	0	0.5	0	0	-4,-7	-	-	4	PRINCIPAL:2
ENSMUSG00000032239	Rp9	ENSMUST00000214005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032239	Rp9	ENSMUST00000217370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032239	Rp9	ENSMUST00000216973	ENSMUSP00000150554	TRANSLATION	protein_coding	-	-	3	128	4	0	0	0	0	-4,-7	-	-	4	ALTERNATIVE:2
ENSMUSG00000032097	Ddx6	ENSMUST00000213697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032097	Ddx6	ENSMUST00000170489	ENSMUSP00000128421	TRANSLATION	protein_coding	-	CCDS23116.1	5	483	13	10.2	15	239.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032097	Ddx6	ENSMUST00000217034	ENSMUSP00000149620	TRANSLATION	protein_coding	-	CCDS23116.1	1	483	13	10.2	15	239.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000066899	Olfr870	ENSMUST00000215984	ENSMUSP00000150084	TRANSLATION	protein_coding	-	CCDS22872.1	5	311	0	0.36	6.4	176.9	5	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000066899	Olfr870	ENSMUST00000086476	ENSMUSP00000091405	TRANSLATION	protein_coding	-	CCDS22872.1	-	311	0	0.36	6.4	176.9	5	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000015357	Clpx	ENSMUST00000015501	ENSMUSP00000015501	TRANSLATION	protein_coding	-	CCDS23288.1	1	634	10	5.8	3.9	193.6	0	-2,0	-	-	19	PRINCIPAL:3
ENSMUSG00000015357	Clpx	ENSMUST00000113824	ENSMUSP00000109455	TRANSLATION	protein_coding	-	CCDS40669.1	1	620	10	5.5	3.9	193.6	0	-2,0	-	-	18.4	ALTERNATIVE:2
ENSMUSG00000015357	Clpx	ENSMUST00000147279	ENSMUSP00000116377	TRANSLATION	protein_coding	start/stop	-	2	192	8	2.2	0	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015357	Clpx	ENSMUST00000148632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000176055	ENSMUSP00000135253	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000174628	ENSMUSP00000133404	TRANSLATION	protein_coding	-	CCDS72232.1	1	694	0	13.58	1.5	115.7	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000176798	ENSMUSP00000135525	TRANSLATION	protein_coding	-	-	5	667	0	13.58	2.4	103.9	0	-4,-5	-	-	11.775	MINOR
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000176414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000034560	ENSMUSP00000034560	TRANSLATION	protein_coding	-	CCDS40625.1	1	658	0	13.58	1.5	115.7	0	-4,-5	-	-	12.172	PRINCIPAL:4
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000175640	ENSMUSP00000134740	TRANSLATION	protein_coding	-	-	5	474	0	11.58	1.2	75.7	0	-4,-5	-	-	5.667	MINOR
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000177454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000176349	ENSMUSP00000135758	TRANSLATION	protein_coding	-	-	5	603	0	11.58	1.2	115.7	0	-4,-5	-	-	8.067	MINOR
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000114437	ENSMUSP00000110080	TRANSLATION	protein_coding	-	CCDS40626.1	1	601	0	13.58	3.9	115.7	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000174555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000175645	ENSMUSP00000135871	TRANSLATION	protein_coding	-	-	5	556	0	12.58	1.2	104.9	0	-4,-5	-	-	9.423	MINOR
ENSMUSG00000032058	Ppp2r1b	ENSMUST00000175926	ENSMUSP00000134886	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000134746	ENSMUSP00000116713	TRANSLATION	nonsense_mediated_decay	-	-	5	210	0	0	0	170.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000148904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031922	Cep57	ENSMUST00000034398	ENSMUSP00000034398	TRANSLATION	protein_coding	-	CCDS52724.1	1	500	0	2.23	0.5	293.8	0	-3,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000031922	Cep57	ENSMUST00000150893	ENSMUSP00000115338	TRANSLATION	protein_coding	stop	-	1	282	0	2.23	0	179.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000147115	ENSMUSP00000116931	TRANSLATION	protein_coding	-	CCDS80955.1	1	474	0	2.23	0.5	293.8	0	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031922	Cep57	ENSMUST00000151878	ENSMUSP00000116847	TRANSLATION	protein_coding	start/stop	-	3	231	0	0	0	137.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000144484	ENSMUSP00000114940	TRANSLATION	nonsense_mediated_decay	-	-	1	122	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000131425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031922	Cep57	ENSMUST00000148086	ENSMUSP00000114665	TRANSLATION	protein_coding	-	-	1	473	0	2.23	4.6	293.8	0	-4,-7	-	-	13	ALTERNATIVE:1
ENSMUSG00000031922	Cep57	ENSMUST00000124883	ENSMUSP00000119081	TRANSLATION	protein_coding	-	-	1	351	0	2.23	0.5	179.4	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000142494	ENSMUSP00000114749	TRANSLATION	nonsense_mediated_decay	-	-	1	296	0	0	0	216.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000031922	Cep57	ENSMUST00000124524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032401	Lctl	ENSMUST00000118215	ENSMUSP00000112979	TRANSLATION	protein_coding	-	-	1	409	9	6.1	0	328.8	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000032401	Lctl	ENSMUST00000139755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032401	Lctl	ENSMUST00000034969	ENSMUSP00000034969	TRANSLATION	protein_coding	-	CCDS23274.1	1	566	12	9.46	2.9	529.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032401	Lctl	ENSMUST00000124020	ENSMUSP00000120815	TRANSLATION	nonsense_mediated_decay	-	-	1	235	5	5.36	0	270.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032401	Lctl	ENSMUST00000145011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032401	Lctl	ENSMUST00000132018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049229	Olfr844	ENSMUST00000220268	ENSMUSP00000153910	TRANSLATION	protein_coding	-	-	5	315	0	0.2	0	183.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049229	Olfr844	ENSMUST00000054106	ENSMUSP00000154398	TRANSLATION	protein_coding	start	-	-	309	0	0.2	0	183.9	5	-3,-7	-	-	-1	MINOR
ENSMUSG00000031933	Izumo1r	ENSMUST00000148155	ENSMUSP00000118680	TRANSLATION	protein_coding	stop	-	3	143	0	3	0	129.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031933	Izumo1r	ENSMUST00000117620	ENSMUSP00000113459	TRANSLATION	protein_coding	-	-	1	173	0	3.8	0	149.4	0	3,-2	-	-	8.064	MINOR
ENSMUSG00000031933	Izumo1r	ENSMUST00000069408	ENSMUSP00000063632	TRANSLATION	protein_coding	-	CCDS22830.1	1	172	0	3.5	0.5	148.3	0	3,-2	-	-	7.398	MINOR
ENSMUSG00000031933	Izumo1r	ENSMUST00000121116	ENSMUSP00000113387	TRANSLATION	protein_coding	-	-	2	190	0	3.5	0	150.9	0	3,-2	-	-	7.554	MINOR
ENSMUSG00000031933	Izumo1r	ENSMUST00000034409	ENSMUSP00000034409	TRANSLATION	protein_coding	-	CCDS22831.1	1	244	0	4.5	1.5	191.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047766	Lrrc49	ENSMUST00000114034	ENSMUSP00000109668	TRANSLATION	protein_coding	-	CCDS52822.1	1	686	0	4.45	7.5	91.5	0	-4,-2	-	-	14.4	PRINCIPAL:1
ENSMUSG00000047766	Lrrc49	ENSMUST00000132366	ENSMUSP00000121491	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047766	Lrrc49	ENSMUST00000128877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047766	Lrrc49	ENSMUST00000136388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047766	Lrrc49	ENSMUST00000053171	ENSMUSP00000057014	TRANSLATION	protein_coding	-	-	1	392	0	0.55	1.7	0	0	-4,-6	-	-	0.324	MINOR
ENSMUSG00000047766	Lrrc49	ENSMUST00000166168	ENSMUSP00000128842	TRANSLATION	protein_coding	-	CCDS52821.1	5	746	0	4.45	0.5	91.5	0	-4,-2	-	-	11.4	MINOR
ENSMUSG00000047766	Lrrc49	ENSMUST00000114032	ENSMUSP00000109666	TRANSLATION	protein_coding	-	CCDS81016.1	1	680	0	4.45	0.5	91.5	0	-4,-2	-	-	11.4	MINOR
ENSMUSG00000047766	Lrrc49	ENSMUST00000065603	ENSMUSP00000070606	TRANSLATION	protein_coding	-	CCDS23257.1	1	752	0	4.45	3.9	91.5	0	-4,-2	-	-	12.738	MINOR
ENSMUSG00000047766	Lrrc49	ENSMUST00000150398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047766	Lrrc49	ENSMUST00000150060	ENSMUSP00000118205	TRANSLATION	nonsense_mediated_decay	-	-	1	362	0	4.75	0	91.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033350	Chst2	ENSMUST00000036267	ENSMUSP00000040775	TRANSLATION	protein_coding	-	CCDS52888.1	1	530	0	0	5.1	85.4	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000002032	Tmem25	ENSMUST00000114705	ENSMUSP00000110353	TRANSLATION	protein_coding	-	-	1	321	0	0	2.4	53.9	0	1,-2	-	-	6.483	ALTERNATIVE:2
ENSMUSG00000002032	Tmem25	ENSMUST00000214431	ENSMUSP00000150386	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	31.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002032	Tmem25	ENSMUST00000213203	ENSMUSP00000151083	TRANSLATION	nonsense_mediated_decay	-	-	2	279	0	0	0	53.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002032	Tmem25	ENSMUST00000213363	ENSMUSP00000150613	TRANSLATION	protein_coding	stop	-	2	94	0	0	0	34.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002032	Tmem25	ENSMUST00000214833	ENSMUSP00000149117	TRANSLATION	protein_coding	stop	-	3	168	0	0	0	53.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002032	Tmem25	ENSMUST00000132020	ENSMUSP00000149260	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002032	Tmem25	ENSMUST00000002100	ENSMUSP00000002100	TRANSLATION	protein_coding	-	CCDS23120.1	1	365	0	0	3.9	53.9	0	1,-2	-	-	7	PRINCIPAL:2
ENSMUSG00000002032	Tmem25	ENSMUST00000213972	ENSMUSP00000149564	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	34.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032557	Uba5	ENSMUST00000144195	ENSMUSP00000118535	TRANSLATION	nonsense_mediated_decay	-	-	5	99	4	1.73	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032557	Uba5	ENSMUST00000140768	ENSMUSP00000118734	TRANSLATION	nonsense_mediated_decay	-	-	5	130	4	1.73	0	30.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032557	Uba5	ENSMUST00000191568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032557	Uba5	ENSMUST00000035166	ENSMUSP00000035166	TRANSLATION	protein_coding	-	CCDS23457.1	1	403	21	8.11	5.1	157.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032557	Uba5	ENSMUST00000214222	ENSMUSP00000149909	TRANSLATION	nonsense_mediated_decay	start	-	5	117	4	1.43	0	30.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045594	Glb1	ENSMUST00000063042	ENSMUSP00000055803	TRANSLATION	protein_coding	-	CCDS23593.1	1	647	12	13.5	1.5	424	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000045594	Glb1	ENSMUST00000217583	ENSMUSP00000149937	TRANSLATION	nonsense_mediated_decay	-	-	1	291	12	6.95	0	355.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096555	Olfr944	ENSMUST00000213908	ENSMUSP00000150072	TRANSLATION	protein_coding	-	CCDS23040.1	2	311	0	0.2	1.5	160.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096555	Olfr944	ENSMUST00000079650	ENSMUSP00000078595	TRANSLATION	protein_coding	-	CCDS23040.1	-	311	0	0.2	1.5	160.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096555	Olfr944	ENSMUST00000215306	ENSMUSP00000150471	TRANSLATION	protein_coding	-	CCDS23040.1	5	311	0	0.2	1.5	160.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032028	Nxpe2	ENSMUST00000137976	ENSMUSP00000116684	TRANSLATION	protein_coding	stop	-	3	187	0	0	0	33	3	-3,-7	-	-	-1	MINOR
ENSMUSG00000032028	Nxpe2	ENSMUST00000149185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032028	Nxpe2	ENSMUST00000142667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032028	Nxpe2	ENSMUST00000034527	ENSMUSP00000034527	TRANSLATION	protein_coding	-	CCDS23151.1	1	558	0	0	1.5	58.8	3	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032028	Nxpe2	ENSMUST00000135457	ENSMUSP00000117580	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	3	-2,-6	-	-	-1	MINOR
ENSMUSG00000038379	Ttk	ENSMUST00000188445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038379	Ttk	ENSMUST00000191484	ENSMUSP00000139900	TRANSLATION	protein_coding	stop	-	5	156	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038379	Ttk	ENSMUST00000185913	ENSMUSP00000139956	TRANSLATION	protein_coding	-	CCDS81044.1	1	773	19	11.25	0.5	134.2	0	-4,-5	-	-	9.342	MINOR
ENSMUSG00000038379	Ttk	ENSMUST00000070326	ENSMUSP00000064839	TRANSLATION	protein_coding	-	CCDS52874.1	1	830	19	13	0.5	220.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038379	Ttk	ENSMUST00000189727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038379	Ttk	ENSMUST00000186277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059475	Zfp426	ENSMUST00000166465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059475	Zfp426	ENSMUST00000080386	ENSMUSP00000079250	TRANSLATION	protein_coding	-	CCDS40544.1	1	550	44	1.996	1.5	308.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000059475	Zfp426	ENSMUST00000115562	ENSMUSP00000111224	TRANSLATION	protein_coding	-	CCDS40544.1	1	550	44	1.996	1.5	308.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000059475	Zfp426	ENSMUST00000166005	ENSMUSP00000129727	TRANSLATION	protein_coding	-	CCDS40544.1	5	550	44	1.996	1.5	308.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000059475	Zfp426	ENSMUST00000169269	ENSMUSP00000128843	TRANSLATION	protein_coding	stop	-	5	68	0	1	0	63.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000164250	ENSMUSP00000131467	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000163348	ENSMUSP00000126446	TRANSLATION	protein_coding	-	CCDS80962.1	1	549	44	1.996	1.5	308.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059475	Zfp426	ENSMUST00000169558	ENSMUSP00000127045	TRANSLATION	protein_coding	-	-	1	564	44	1.996	0	308.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059475	Zfp426	ENSMUST00000163427	ENSMUSP00000131005	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000164825	ENSMUSP00000127914	TRANSLATION	protein_coding	stop	-	3	157	0	1.396	0	86.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000167457	ENSMUSP00000130945	TRANSLATION	protein_coding	-	-	1	483	44	0.996	0	221.6	0	-4,-5	-	-	9.786	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000168095	ENSMUSP00000130309	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	1.33	0	83	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059475	Zfp426	ENSMUST00000164799	ENSMUSP00000130120	TRANSLATION	protein_coding	stop	-	5	93	0	1.33	0	86.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032303	Chrna3	ENSMUST00000034851	ENSMUSP00000034851	TRANSLATION	protein_coding	-	-	1	499	0	4.95	1	564.1	5	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000032303	Chrna3	ENSMUST00000238862	ENSMUSP00000158914	TRANSLATION	protein_coding	-	CCDS23199.1	-	504	0	4.95	0.5	564.1	5	3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000032303	Chrna3	ENSMUST00000214204	ENSMUSP00000150636	TRANSLATION	protein_coding	-	-	1	471	0	4.15	0	504.4	4	4,-1	-	-	6.816	MINOR
ENSMUSG00000053110	Yap1	ENSMUST00000174127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053110	Yap1	ENSMUST00000173264	ENSMUSP00000134237	TRANSLATION	nonsense_mediated_decay	-	-	5	369	0	4	0	76.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053110	Yap1	ENSMUST00000174300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053110	Yap1	ENSMUST00000173085	ENSMUSP00000134007	TRANSLATION	nonsense_mediated_decay	-	-	5	353	0	4	0	76.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053110	Yap1	ENSMUST00000174577	ENSMUSP00000133959	TRANSLATION	nonsense_mediated_decay	-	-	5	357	0	4	0	76.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053110	Yap1	ENSMUST00000173227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053110	Yap1	ENSMUST00000086580	ENSMUSP00000083772	TRANSLATION	protein_coding	-	CCDS40533.1	1	472	0	4	0.5	76.7	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000053110	Yap1	ENSMUST00000172870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053110	Yap1	ENSMUST00000174604	ENSMUSP00000134250	TRANSLATION	protein_coding	start	-	5	397	0	3	0	76.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053110	Yap1	ENSMUST00000065353	ENSMUSP00000069554	TRANSLATION	protein_coding	-	CCDS52718.1	1	488	0	4	0.5	76.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000033543	Gtf2a2	ENSMUST00000122087	ENSMUSP00000113109	TRANSLATION	protein_coding	stop	-	3	91	0	2.5	0	144.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033543	Gtf2a2	ENSMUST00000140305	ENSMUSP00000116962	TRANSLATION	protein_coding	stop	-	3	87	0	2.5	0	142.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033543	Gtf2a2	ENSMUST00000148889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000118198	ENSMUSP00000113501	TRANSLATION	protein_coding	-	CCDS52851.1	1	109	0	3.16	19.5	169.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033543	Gtf2a2	ENSMUST00000141894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000135593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000119413	ENSMUSP00000113697	TRANSLATION	protein_coding	-	CCDS52851.1	1	109	0	3.16	19.5	169.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033543	Gtf2a2	ENSMUST00000119905	ENSMUSP00000113061	TRANSLATION	protein_coding	-	CCDS72269.1	2	68	0	1.75	0.5	85.6	0	-4,-5	-	-	4.128	MINOR
ENSMUSG00000033543	Gtf2a2	ENSMUST00000145816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000131078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000126120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033543	Gtf2a2	ENSMUST00000148239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033543	Gtf2a2	ENSMUST00000116552	ENSMUSP00000112251	TRANSLATION	nonsense_mediated_decay	-	-	1	76	0	1.75	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033543	Gtf2a2	ENSMUST00000140265	ENSMUSP00000121840	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	1.75	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033543	Gtf2a2	ENSMUST00000133881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032253	Phip	ENSMUST00000034787	ENSMUSP00000034787	TRANSLATION	protein_coding	-	CCDS40706.1	1	1821	0	10.62	5.3	232.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032253	Phip	ENSMUST00000186089	ENSMUSP00000139678	TRANSLATION	nonsense_mediated_decay	start	-	1	92	0	1.52	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032253	Phip	ENSMUST00000190838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000189985	ENSMUSP00000140445	TRANSLATION	protein_coding	stop	-	1	360	0	5.19	0	93.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032253	Phip	ENSMUST00000189209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000188828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000190936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000190405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000188868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000189927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000190774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000190822	ENSMUSP00000139866	TRANSLATION	nonsense_mediated_decay	start	-	3	84	0	1.814	0	12.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032253	Phip	ENSMUST00000186099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000187021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000190101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032253	Phip	ENSMUST00000188850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032033	Barx2	ENSMUST00000116615	ENSMUSP00000112314	TRANSLATION	protein_coding	-	CCDS52750.1	1	283	0	1.35	0.5	73.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032382	Snx1	ENSMUST00000139872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032382	Snx1	ENSMUST00000132841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032382	Snx1	ENSMUST00000137542	ENSMUSP00000120746	TRANSLATION	protein_coding	stop	-	5	192	0	3	0	59.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032382	Snx1	ENSMUST00000143148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032382	Snx1	ENSMUST00000034946	ENSMUSP00000034946	TRANSLATION	protein_coding	-	CCDS52839.1	1	521	0	9.15	7.5	374.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000032382	Snx1	ENSMUST00000146893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032382	Snx1	ENSMUST00000145449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045812	Olfr984	ENSMUST00000217536	ENSMUSP00000150287	TRANSLATION	protein_coding	-	CCDS23075.1	3	314	0	0.42	7.5	144.6	6	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045812	Olfr984	ENSMUST00000213858	ENSMUSP00000150545	TRANSLATION	protein_coding	-	CCDS23075.1	5	314	0	0.42	7.5	144.6	6	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045812	Olfr984	ENSMUST00000214856	ENSMUSP00000151081	TRANSLATION	protein_coding	-	CCDS23075.1	5	314	0	0.42	7.5	144.6	6	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045812	Olfr984	ENSMUST00000056795	ENSMUSP00000060787	TRANSLATION	protein_coding	-	CCDS23075.1	-	314	0	0.42	7.5	144.6	6	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032485	Scap	ENSMUST00000196465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032485	Scap	ENSMUST00000197630	ENSMUSP00000142919	TRANSLATION	protein_coding	stop	-	3	123	2	0.9	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032485	Scap	ENSMUST00000196775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032485	Scap	ENSMUST00000199886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032485	Scap	ENSMUST00000199709	ENSMUSP00000142458	TRANSLATION	protein_coding	stop	-	2	40	2	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000032485	Scap	ENSMUST00000196424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032485	Scap	ENSMUST00000198976	ENSMUSP00000143369	TRANSLATION	protein_coding	stop	-	5	153	2	1.2	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032485	Scap	ENSMUST00000198871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032485	Scap	ENSMUST00000098350	ENSMUSP00000095953	TRANSLATION	protein_coding	-	CCDS23564.1	1	1276	2	7.47	2.7	198.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032485	Scap	ENSMUST00000198761	ENSMUSP00000143710	TRANSLATION	protein_coding	stop	-	2	40	2	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000035498	Cdcp1	ENSMUST00000140915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035498	Cdcp1	ENSMUST00000039229	ENSMUSP00000042057	TRANSLATION	protein_coding	-	CCDS23657.1	1	833	0	0	2.7	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000035498	Cdcp1	ENSMUST00000148158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025899	Alkbh8	ENSMUST00000211884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025899	Alkbh8	ENSMUST00000212666	ENSMUSP00000148467	TRANSLATION	protein_coding	stop	-	2	57	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025899	Alkbh8	ENSMUST00000212955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025899	Alkbh8	ENSMUST00000212294	ENSMUSP00000148380	TRANSLATION	protein_coding	-	-	1	629	15	9.52	0	150.2	0	-4,-7	-	-	14.67	MINOR
ENSMUSG00000025899	Alkbh8	ENSMUST00000212154	ENSMUSP00000148438	TRANSLATION	protein_coding	stop	-	3	142	0	3.46	0	94.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025899	Alkbh8	ENSMUST00000053407	ENSMUSP00000061511	TRANSLATION	protein_coding	-	CCDS22792.1	1	664	17	10.52	1.5	150.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025899	Alkbh8	ENSMUST00000211933	ENSMUSP00000148653	TRANSLATION	protein_coding	-	CCDS22792.1	1	664	17	10.52	1.5	150.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025899	Alkbh8	ENSMUST00000212358	ENSMUSP00000148274	TRANSLATION	nonsense_mediated_decay	-	-	1	199	0	5.21	0	94.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025899	Alkbh8	ENSMUST00000212817	ENSMUSP00000148347	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0.8	0	59.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025899	Alkbh8	ENSMUST00000165105	ENSMUSP00000125996	TRANSLATION	protein_coding	-	CCDS22792.1	5	664	17	10.52	1.5	150.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000034684	Sema3f	ENSMUST00000080560	ENSMUSP00000079400	TRANSLATION	protein_coding	-	CCDS23505.1	1	754	0	14.48	4.9	489.3	0	3,-2	-	-	12.718	PRINCIPAL:1
ENSMUSG00000034684	Sema3f	ENSMUST00000193108	ENSMUSP00000141878	TRANSLATION	protein_coding	stop	-	5	191	0	4.56	0	123.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000193665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034684	Sema3f	ENSMUST00000192712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034684	Sema3f	ENSMUST00000194846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034684	Sema3f	ENSMUST00000192727	ENSMUSP00000141865	TRANSLATION	protein_coding	-	CCDS81069.1	1	785	0	14.62	3.9	483.9	0	3,-2	-	-	12.42	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000194039	ENSMUSP00000142221	TRANSLATION	nonsense_mediated_decay	-	-	1	185	0	4.23	0	114	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000192783	ENSMUSP00000141668	TRANSLATION	protein_coding	start	-	3	284	0	2.37	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000192157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034684	Sema3f	ENSMUST00000195023	ENSMUSP00000141350	TRANSLATION	protein_coding	start/stop	-	3	148	0	3.665	0	104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000194424	ENSMUSP00000142178	TRANSLATION	nonsense_mediated_decay	start	-	3	116	0	2	0	124.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034684	Sema3f	ENSMUST00000195267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096424	Olfr885	ENSMUST00000081985	ENSMUSP00000080646	TRANSLATION	protein_coding	-	CCDS22995.1	-	309	0	0.2	5.1	172.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032803	Cdv3	ENSMUST00000035484	ENSMUSP00000044420	TRANSLATION	protein_coding	-	CCDS23454.1	1	281	0	0	1.5	146.7	0	-4,-5	-	-	6.232	PRINCIPAL:3
ENSMUSG00000032803	Cdv3	ENSMUST00000190127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032803	Cdv3	ENSMUST00000072249	ENSMUSP00000072101	TRANSLATION	protein_coding	-	CCDS40748.1	1	236	0	0	1.5	146.7	0	-4,-5	-	-	6.232	ALTERNATIVE:2
ENSMUSG00000032803	Cdv3	ENSMUST00000190226	ENSMUSP00000140900	TRANSLATION	protein_coding	-	-	5	154	0	0	5.3	105.2	0	-4,-5	-	-	5.51	ALTERNATIVE:1
ENSMUSG00000032803	Cdv3	ENSMUST00000189896	ENSMUSP00000139440	TRANSLATION	protein_coding	-	CCDS81064.1	1	235	0	0	1.5	146.7	0	-4,-5	-	-	6.232	ALTERNATIVE:2
ENSMUSG00000032803	Cdv3	ENSMUST00000189875	ENSMUSP00000140690	TRANSLATION	protein_coding	start	-	3	154	0	0	0	143.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032803	Cdv3	ENSMUST00000116517	ENSMUSP00000112216	TRANSLATION	protein_coding	-	CCDS52902.1	1	109	0	0	3.9	105.2	0	-4,-5	-	-	4.858	MINOR
ENSMUSG00000043943	Naalad2	ENSMUST00000172116	ENSMUSP00000133157	TRANSLATION	protein_coding	stop	-	3	98	0	1	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000043943	Naalad2	ENSMUST00000166825	ENSMUSP00000128674	TRANSLATION	protein_coding	-	CCDS52728.1	1	740	11	16.75	5.1	225.9	2	-2,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000043943	Naalad2	ENSMUST00000168934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043943	Naalad2	ENSMUST00000172200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043943	Naalad2	ENSMUST00000172171	ENSMUSP00000130752	TRANSLATION	protein_coding	-	-	1	778	11	16.75	1.5	225.9	2	-4,-6	-	-	18.244	MINOR
ENSMUSG00000043943	Naalad2	ENSMUST00000001826	ENSMUSP00000001826	TRANSLATION	protein_coding	-	-	1	778	11	16.75	1.5	225.9	2	-4,-6	-	-	18.244	MINOR
ENSMUSG00000043943	Naalad2	ENSMUST00000101453	ENSMUSP00000098996	TRANSLATION	protein_coding	stop	-	2	53	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043943	Naalad2	ENSMUST00000164081	ENSMUSP00000126563	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032116	Stt3a	ENSMUST00000133060	ENSMUSP00000120360	TRANSLATION	protein_coding	stop	-	5	90	1	0.625	0	91.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032116	Stt3a	ENSMUST00000138358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032116	Stt3a	ENSMUST00000135934	ENSMUSP00000117794	TRANSLATION	protein_coding	start	-	5	112	1	0.425	0	142.8	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000032116	Stt3a	ENSMUST00000217599	ENSMUSP00000149855	TRANSLATION	protein_coding	-	-	5	60	0	0.625	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000032116	Stt3a	ENSMUST00000143881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032116	Stt3a	ENSMUST00000137994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032116	Stt3a	ENSMUST00000128270	ENSMUSP00000114527	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0.625	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032116	Stt3a	ENSMUST00000215998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032116	Stt3a	ENSMUST00000120381	ENSMUSP00000113116	TRANSLATION	protein_coding	-	CCDS52768.1	1	705	3	6.97	19.5	534.5	12	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000032252	Glce	ENSMUST00000185675	ENSMUSP00000139949	TRANSLATION	protein_coding	-	CCDS23262.1	1	618	0	3.1	7.6	251.3	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032252	Glce	ENSMUST00000185510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032252	Glce	ENSMUST00000186514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032252	Glce	ENSMUST00000034785	ENSMUSP00000034785	TRANSLATION	protein_coding	-	CCDS23262.1	1	618	0	3.1	7.6	251.3	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032252	Glce	ENSMUST00000185873	ENSMUSP00000140671	TRANSLATION	protein_coding	stop	-	3	44	0	1	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000050853	Olfr958	ENSMUST00000217227	ENSMUSP00000149788	TRANSLATION	protein_coding	-	CCDS23050.1	5	312	0	0.16	7.6	165.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050853	Olfr958	ENSMUST00000062545	ENSMUSP00000049930	TRANSLATION	protein_coding	-	CCDS23050.1	-	312	0	0.16	7.6	165.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050853	Olfr958	ENSMUST00000215505	ENSMUSP00000149018	TRANSLATION	protein_coding	-	CCDS23050.1	5	312	0	0.16	7.6	165.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096109	Olfr1537	ENSMUST00000073248	ENSMUSP00000072979	TRANSLATION	protein_coding	-	CCDS23041.1	-	314	0	0.28	3.9	170.5	6	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000096109	Olfr1537	ENSMUST00000213472	ENSMUSP00000149992	TRANSLATION	protein_coding	-	-	2	311	0	0.28	3.9	170.5	6	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000043089	Mmp1a	ENSMUST00000034492	ENSMUSP00000034492	TRANSLATION	protein_coding	-	-	5	463	26	9.33	0.5	345.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000043089	Mmp1a	ENSMUST00000217651	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000032191	Bcl2l10	ENSMUST00000034709	ENSMUSP00000034709	TRANSLATION	protein_coding	-	CCDS23341.1	1	191	0	1.8	0.5	61.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032565	Nudt16	ENSMUST00000186925	ENSMUSP00000140590	TRANSLATION	protein_coding	start	-	3	191	13	3.33	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032565	Nudt16	ENSMUST00000186933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032565	Nudt16	ENSMUST00000185533	ENSMUSP00000140976	TRANSLATION	protein_coding	start	-	5	66	4	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032565	Nudt16	ENSMUST00000190375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032565	Nudt16	ENSMUST00000035179	ENSMUSP00000035179	TRANSLATION	protein_coding	-	CCDS40751.1	1	195	13	3.33	5.1	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000099974	Bcl2a1d	ENSMUST00000098486	ENSMUSP00000096087	TRANSLATION	protein_coding	-	CCDS23390.1	1	172	0	1.8	5.1	87.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032126	Hmbs	ENSMUST00000214967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032126	Hmbs	ENSMUST00000215859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032126	Hmbs	ENSMUST00000214012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032126	Hmbs	ENSMUST00000215934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032126	Hmbs	ENSMUST00000216658	ENSMUSP00000150138	TRANSLATION	protein_coding	start	-	3	126	6	3.5	0	77.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032126	Hmbs	ENSMUST00000097558	ENSMUSP00000095166	TRANSLATION	protein_coding	-	CCDS52779.1	1	344	15	9.66	8.8	78.9	0	-4,-2	-	-	19.68	MINOR
ENSMUSG00000032126	Hmbs	ENSMUST00000216852	ENSMUSP00000150673	TRANSLATION	nonsense_mediated_decay	-	-	2	39	0	0.5	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000032126	Hmbs	ENSMUST00000215091	ENSMUSP00000149522	TRANSLATION	protein_coding	stop	-	2	52	1	1.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032126	Hmbs	ENSMUST00000077353	ENSMUSP00000076575	TRANSLATION	protein_coding	-	CCDS23106.1	1	361	15	10.32	8.8	78.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000041737	Tmem45b	ENSMUST00000213807	ENSMUSP00000150828	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	2	-2,-7	-	-	-1	MINOR
ENSMUSG00000041737	Tmem45b	ENSMUST00000048050	ENSMUSP00000042313	TRANSLATION	protein_coding	-	CCDS22950.1	1	278	0	0	3.9	118.5	12	-2,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000041737	Tmem45b	ENSMUST00000217007	ENSMUSP00000149691	TRANSLATION	protein_coding	-	-	2	192	0	0	0	118.5	9	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000041737	Tmem45b	ENSMUST00000216875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000182337	ENSMUSP00000138164	TRANSLATION	protein_coding	stop	-	3	101	4	3.03	0	72	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000182607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000182311	ENSMUSP00000138690	TRANSLATION	protein_coding	stop	-	5	99	3	3.33	0	70.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000035112	ENSMUSP00000035112	TRANSLATION	protein_coding	-	CCDS23636.1	1	1453	9	5.33	0.5	158.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032525	Nktr	ENSMUST00000216573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000182225	ENSMUSP00000138168	TRANSLATION	protein_coding	stop	-	1	966	9	5.33	0	158.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000183311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000182179	ENSMUSP00000138437	TRANSLATION	nonsense_mediated_decay	-	-	1	105	4	3.198	1.2	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000183207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032525	Nktr	ENSMUST00000182763	ENSMUSP00000138272	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	2.198	0	28.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182503	ENSMUSP00000138463	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182713	ENSMUSP00000138587	TRANSLATION	protein_coding	start	-	3	95	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000213351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032525	Nktr	ENSMUST00000183070	ENSMUSP00000138611	TRANSLATION	nonsense_mediated_decay	-	-	1	105	4	3.198	1.2	68.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032525	Nktr	ENSMUST00000182904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094893	Gm4791	ENSMUST00000178065	ENSMUSP00000137580	TRANSLATION	protein_coding	-	CCDS57674.1	1	102	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000010607	Pigyl	ENSMUST00000123680	ENSMUSP00000116929	TRANSLATION	protein_coding	-	CCDS52742.1	2	71	0	0	15.5	66.7	1	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000010607	Pigyl	ENSMUST00000148088	ENSMUSP00000116967	TRANSLATION	protein_coding	-	CCDS52742.1	2	71	0	0	15.5	66.7	1	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000040936	Ulk4	ENSMUST00000164336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040936	Ulk4	ENSMUST00000170237	ENSMUSP00000131488	TRANSLATION	nonsense_mediated_decay	-	-	1	139	0	0.14	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040936	Ulk4	ENSMUST00000170406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040936	Ulk4	ENSMUST00000164969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040936	Ulk4	ENSMUST00000051479	ENSMUSP00000057960	TRANSLATION	protein_coding	-	-	1	1188	0	5.75	0	166.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040936	Ulk4	ENSMUST00000051565	ENSMUSP00000054833	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040936	Ulk4	ENSMUST00000169176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040936	Ulk4	ENSMUST00000171061	ENSMUSP00000129214	TRANSLATION	nonsense_mediated_decay	-	-	5	910	0	5.75	0	166.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040936	Ulk4	ENSMUST00000213408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040936	Ulk4	ENSMUST00000171923	ENSMUSP00000131342	TRANSLATION	protein_coding	-	CCDS52967.1	5	1275	0	5.75	0.5	166.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042254	Cilp	ENSMUST00000048762	ENSMUSP00000036631	TRANSLATION	protein_coding	-	CCDS23287.1	1	1250	0	1.84	0.5	155.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000042254	Cilp	ENSMUST00000141382	ENSMUSP00000121326	TRANSLATION	nonsense_mediated_decay	-	-	5	74	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000039313	Minar1	ENSMUST00000044491	ENSMUSP00000046111	TRANSLATION	protein_coding	-	CCDS23395.1	1	917	0	0	7.5	232.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039313	Minar1	ENSMUST00000191465	ENSMUSP00000140942	TRANSLATION	nonsense_mediated_decay	-	-	5	855	0	0	2.4	95.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035594	Chrna5	ENSMUST00000093844	ENSMUSP00000091365	TRANSLATION	protein_coding	-	CCDS52800.1	1	438	0	4	2.5	455.3	4	-4,-5	-	-	11.598	PRINCIPAL:2
ENSMUSG00000035594	Chrna5	ENSMUST00000217408	ENSMUSP00000149366	TRANSLATION	protein_coding	-	-	1	363	0	1.7	0	325.2	4	2,3	-	-	1.002	MINOR
ENSMUSG00000035594	Chrna5	ENSMUST00000213960	ENSMUSP00000150942	TRANSLATION	protein_coding	-	-	1	467	0	4.2	2.7	455.3	4	1,3	-	-	12	ALTERNATIVE:2
ENSMUSG00000035594	Chrna5	ENSMUST00000216865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032911	Cspg4	ENSMUST00000217052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032911	Cspg4	ENSMUST00000215666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032911	Cspg4	ENSMUST00000035661	ENSMUSP00000038909	TRANSLATION	protein_coding	-	CCDS23211.1	1	2327	23	1.16	1.5	796.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032911	Cspg4	ENSMUST00000214057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005131	4930550C14Rik	ENSMUST00000215668	ENSMUSP00000150018	TRANSLATION	protein_coding	-	-	1	170	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000005131	4930550C14Rik	ENSMUST00000005262	ENSMUSP00000005262	TRANSLATION	protein_coding	-	CCDS23183.1	1	315	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000005131	4930550C14Rik	ENSMUST00000214790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005131	4930550C14Rik	ENSMUST00000217318	ENSMUSP00000149814	TRANSLATION	protein_coding	-	-	1	170	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000053040	Aph1c	ENSMUST00000057261	ENSMUSP00000056476	TRANSLATION	protein_coding	-	-	1	208	0	4.75	0.5	208.4	5	-4,-7	-	-	3.846	MINOR
ENSMUSG00000053040	Aph1c	ENSMUST00000169282	ENSMUSP00000130359	TRANSLATION	protein_coding	-	CCDS23308.1	1	258	0	6.25	5.1	294.3	7	0,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000066839	Ecsit	ENSMUST00000217445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066839	Ecsit	ENSMUST00000180180	ENSMUSP00000136247	TRANSLATION	protein_coding	-	CCDS22920.1	1	435	0	0	1.5	501.9	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000066839	Ecsit	ENSMUST00000098937	ENSMUSP00000096537	TRANSLATION	protein_coding	-	CCDS22920.1	1	435	0	0	1.5	501.9	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000066839	Ecsit	ENSMUST00000177967	ENSMUSP00000135936	TRANSLATION	protein_coding	stop	-	5	223	0	0	0	339.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066839	Ecsit	ENSMUST00000179422	ENSMUSP00000137424	TRANSLATION	protein_coding	-	CCDS22920.1	1	435	0	0	1.5	501.9	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000031939	Taf1d	ENSMUST00000213235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000214054	ENSMUSP00000150937	TRANSLATION	nonsense_mediated_decay	-	-	5	288	0	0	0.5	336.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000034415	ENSMUSP00000034415	TRANSLATION	protein_coding	-	CCDS22836.1	1	322	0	0	0.5	336.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000031939	Taf1d	ENSMUST00000214899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000216256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000214045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031939	Taf1d	ENSMUST00000213763	ENSMUSP00000150356	TRANSLATION	nonsense_mediated_decay	-	-	1	288	0	0	0.5	336.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000216825	ENSMUSP00000149377	TRANSLATION	nonsense_mediated_decay	-	-	1	288	0	0	0.5	336.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000215124	ENSMUSP00000150723	TRANSLATION	protein_coding	stop	-	3	153	0	0	0	158.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000213923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000214316	ENSMUSP00000149380	TRANSLATION	protein_coding	start	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000216768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000164079	ENSMUSP00000129141	TRANSLATION	protein_coding	-	CCDS52726.1	1	290	0	0	0.5	336.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031939	Taf1d	ENSMUST00000214221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031939	Taf1d	ENSMUST00000215749	ENSMUSP00000150491	TRANSLATION	nonsense_mediated_decay	start	-	3	122	0	0	0	125.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031939	Taf1d	ENSMUST00000216109	ENSMUSP00000150890	TRANSLATION	protein_coding	stop	-	5	92	0	0	0	74.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032372	Plscr2	ENSMUST00000113044	ENSMUSP00000108667	TRANSLATION	protein_coding	-	-	3	172	0	0	0	229.4	0	-4,-5	-	-	1.566	MINOR
ENSMUSG00000032372	Plscr2	ENSMUST00000126911	ENSMUSP00000119104	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032372	Plscr2	ENSMUST00000156772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032372	Plscr2	ENSMUST00000180154	ENSMUSP00000136481	TRANSLATION	protein_coding	-	CCDS23405.1	1	307	0	0	1.5	303.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032372	Plscr2	ENSMUST00000034932	ENSMUSP00000034932	TRANSLATION	protein_coding	-	CCDS23405.1	1	307	0	0	1.5	303.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032083	Apoa1	ENSMUST00000132155	ENSMUSP00000150525	TRANSLATION	protein_coding	stop	-	1	122	0	2	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032083	Apoa1	ENSMUST00000034588	ENSMUSP00000034588	TRANSLATION	protein_coding	-	CCDS40610.1	1	264	0	3	0.5	170.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000093934	Olfr971	ENSMUST00000075467	ENSMUSP00000074913	TRANSLATION	protein_coding	-	CCDS23063.1	-	307	0	0.2	6.4	179.7	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000093934	Olfr971	ENSMUST00000214242	ENSMUSP00000148850	TRANSLATION	protein_coding	-	CCDS23063.1	5	307	0	0.2	6.4	179.7	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025243	Slc6a20b	ENSMUST00000171122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025243	Slc6a20b	ENSMUST00000163397	ENSMUSP00000127422	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0.8	0	48.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025243	Slc6a20b	ENSMUST00000168824	ENSMUSP00000129307	TRANSLATION	nonsense_mediated_decay	start	-	1	74	0	0.8	0	48.3	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000025243	Slc6a20b	ENSMUST00000026273	ENSMUSP00000026273	TRANSLATION	protein_coding	-	CCDS23661.1	1	635	0	8.04	1.5	568.9	15	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025243	Slc6a20b	ENSMUST00000164241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025243	Slc6a20b	ENSMUST00000166800	ENSMUSP00000150479	TRANSLATION	nonsense_mediated_decay	-	-	2	532	0	6.4	0	460.9	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000039217	Il18	ENSMUST00000180021	ENSMUSP00000137193	TRANSLATION	protein_coding	-	CCDS40622.1	1	192	0	3	1.5	98.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000039217	Il18	ENSMUST00000213916	ENSMUSP00000150305	TRANSLATION	protein_coding	-	-	1	78	0	1	0	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000039217	Il18	ENSMUST00000059081	ENSMUSP00000054591	TRANSLATION	protein_coding	-	-	5	192	0	3	1.5	98.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039217	Il18	ENSMUST00000214117	ENSMUSP00000151002	TRANSLATION	protein_coding	-	CCDS40622.1	1	192	0	3	1.5	98.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025245	Lztfl1	ENSMUST00000214521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025245	Lztfl1	ENSMUST00000165799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025245	Lztfl1	ENSMUST00000166184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025245	Lztfl1	ENSMUST00000168921	ENSMUSP00000132359	TRANSLATION	protein_coding	start	-	5	235	0	0	0	187	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025245	Lztfl1	ENSMUST00000098258	ENSMUSP00000095858	TRANSLATION	protein_coding	start	-	5	218	0	0	0	284.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025245	Lztfl1	ENSMUST00000168923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025245	Lztfl1	ENSMUST00000026274	ENSMUSP00000026274	TRANSLATION	protein_coding	-	CCDS40818.1	1	299	0	0	6.3	410.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000025245	Lztfl1	ENSMUST00000166097	ENSMUSP00000130872	TRANSLATION	nonsense_mediated_decay	-	-	5	134	0	0	0	209.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025245	Lztfl1	ENSMUST00000217171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025245	Lztfl1	ENSMUST00000163207	ENSMUSP00000150134	TRANSLATION	protein_coding	start/stop	-	2	207	0	0	0	285.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025245	Lztfl1	ENSMUST00000165754	ENSMUSP00000150089	TRANSLATION	protein_coding	start	-	1	290	0	0	0	363.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025245	Lztfl1	ENSMUST00000172067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032591	Mst1	ENSMUST00000161253	ENSMUSP00000141729	TRANSLATION	protein_coding	start	-	3	62	0	2	0	33.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032591	Mst1	ENSMUST00000035211	ENSMUSP00000035211	TRANSLATION	protein_coding	-	CCDS40766.1	1	716	0	15.7424	1.5	585.6	0	3,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000032591	Mst1	ENSMUST00000160184	ENSMUSP00000125462	TRANSLATION	nonsense_mediated_decay	start	-	3	42	9	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032591	Mst1	ENSMUST00000162886	ENSMUSP00000125175	TRANSLATION	protein_coding	-	-	5	707	0	15.584	0	585.6	0	3,-3	-	-	11.682	ALTERNATIVE:2
ENSMUSG00000032274	Cyp19a1	ENSMUST00000034811	ENSMUSP00000034811	TRANSLATION	protein_coding	-	CCDS23187.1	1	503	38	9.5	2.7	353.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000032274	Cyp19a1	ENSMUST00000215736	ENSMUSP00000150729	TRANSLATION	protein_coding	-	-	1	436	38	8	1.2	348.5	0	-4,-5	-	-	14.712	MINOR
ENSMUSG00000032274	Cyp19a1	ENSMUST00000216974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032274	Cyp19a1	ENSMUST00000214358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032274	Cyp19a1	ENSMUST00000217040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032540	Abhd5	ENSMUST00000154161	ENSMUSP00000122939	TRANSLATION	protein_coding	stop	-	3	127	6	1.07	0	58.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032540	Abhd5	ENSMUST00000214061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032540	Abhd5	ENSMUST00000175973	ENSMUSP00000135807	TRANSLATION	nonsense_mediated_decay	-	-	2	46	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032540	Abhd5	ENSMUST00000176005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032540	Abhd5	ENSMUST00000035128	ENSMUSP00000135538	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032540	Abhd5	ENSMUST00000156520	ENSMUSP00000122274	TRANSLATION	protein_coding	-	CCDS23646.1	1	351	7	4.22	2.7	71.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032540	Abhd5	ENSMUST00000111497	ENSMUSP00000107123	TRANSLATION	protein_coding	-	-	1	198	1	2.4	0.5	0	0	-4,-5	-	-	3.216	MINOR
ENSMUSG00000032540	Abhd5	ENSMUST00000216775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111814	Olfr896-ps1	ENSMUST00000214066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111814	Olfr896-ps1	ENSMUST00000215219	ENSMUSP00000149692	TRANSLATION	protein_coding	-	-	5	308	0	0.24	3.4	167.6	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000111814	Olfr896-ps1	ENSMUST00000216276	ENSMUSP00000149903	TRANSLATION	protein_coding	-	-	5	308	0	0.24	3.4	167.6	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000035934	Pknox2	ENSMUST00000039674	ENSMUSP00000035806	TRANSLATION	protein_coding	-	CCDS22974.1	1	474	0	2.35	10.8	202.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035934	Pknox2	ENSMUST00000177080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035934	Pknox2	ENSMUST00000188348	ENSMUSP00000139976	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035934	Pknox2	ENSMUST00000188433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035934	Pknox2	ENSMUST00000080754	ENSMUSP00000079578	TRANSLATION	protein_coding	-	CCDS22974.1	1	474	0	2.35	10.8	202.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035934	Pknox2	ENSMUST00000177444	ENSMUSP00000135641	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035934	Pknox2	ENSMUST00000189294	ENSMUSP00000139728	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035934	Pknox2	ENSMUST00000175938	ENSMUSP00000138866	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035934	Pknox2	ENSMUST00000213653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035934	Pknox2	ENSMUST00000176562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035934	Pknox2	ENSMUST00000176622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035934	Pknox2	ENSMUST00000215175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035934	Pknox2	ENSMUST00000177218	ENSMUSP00000135581	TRANSLATION	protein_coding	-	CCDS22974.1	1	474	0	2.35	10.8	202.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035934	Pknox2	ENSMUST00000188057	ENSMUSP00000140793	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053289	Ddx10	ENSMUST00000065630	ENSMUSP00000065198	TRANSLATION	protein_coding	-	CCDS52796.1	1	875	15	8.8	1.5	316.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032449	Slc25a36	ENSMUST00000085206	ENSMUSP00000082302	TRANSLATION	protein_coding	-	CCDS23420.1	1	311	0	3.262	16.1	231.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032449	Slc25a36	ENSMUST00000124250	ENSMUSP00000119696	TRANSLATION	protein_coding	start	-	3	115	0	1.512	0	72.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032449	Slc25a36	ENSMUST00000153070	ENSMUSP00000116813	TRANSLATION	nonsense_mediated_decay	-	-	5	132	0	1.812	0	89.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032449	Slc25a36	ENSMUST00000148995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032449	Slc25a36	ENSMUST00000035024	ENSMUSP00000035024	TRANSLATION	protein_coding	-	-	1	172	0	1.3	0	107.3	0	-4,-1	-	-	2.076	MINOR
ENSMUSG00000032449	Slc25a36	ENSMUST00000152632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032449	Slc25a36	ENSMUST00000148337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032449	Slc25a36	ENSMUST00000155291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032449	Slc25a36	ENSMUST00000137372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044534	Ackr2	ENSMUST00000050327	ENSMUSP00000050119	TRANSLATION	protein_coding	-	CCDS23640.1	1	378	0	2.05	1.5	135.2	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044534	Ackr2	ENSMUST00000214340	ENSMUSP00000148966	TRANSLATION	protein_coding	-	CCDS23640.1	1	378	0	2.05	1.5	135.2	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044534	Ackr2	ENSMUST00000215664	ENSMUSP00000151092	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044534	Ackr2	ENSMUST00000216326	ENSMUSP00000150219	TRANSLATION	protein_coding	stop	-	1	67	0	1.25	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000094810	Olfr907	ENSMUST00000052901	ENSMUSP00000051531	TRANSLATION	protein_coding	-	CCDS23014.1	-	310	0	0.36	5.2	156.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094810	Olfr907	ENSMUST00000214264	ENSMUSP00000148894	TRANSLATION	protein_coding	-	CCDS23014.1	5	310	0	0.36	5.2	156.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094810	Olfr907	ENSMUST00000214003	ENSMUSP00000149897	TRANSLATION	protein_coding	-	CCDS23014.1	3	310	0	0.36	5.2	156.3	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042557	Sin3a	ENSMUST00000163400	ENSMUSP00000126718	TRANSLATION	protein_coding	stop	-	5	133	0	2	0	72.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042557	Sin3a	ENSMUST00000169879	ENSMUSP00000129062	TRANSLATION	protein_coding	stop	-	5	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042557	Sin3a	ENSMUST00000168678	ENSMUSP00000126601	TRANSLATION	protein_coding	-	CCDS23216.1	1	1274	0	9.7	12.8	650.5	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000042557	Sin3a	ENSMUST00000168177	ENSMUSP00000130221	TRANSLATION	protein_coding	-	CCDS52805.1	1	1277	0	9.7	12.8	649.2	0	-4,-7	-	-	15.922	ALTERNATIVE:1
ENSMUSG00000042557	Sin3a	ENSMUST00000167963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042557	Sin3a	ENSMUST00000167715	ENSMUSP00000130641	TRANSLATION	protein_coding	-	CCDS23216.1	5	1274	0	9.7	12.8	650.5	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000042557	Sin3a	ENSMUST00000049169	ENSMUSP00000045044	TRANSLATION	protein_coding	-	CCDS23216.1	1	1274	0	9.7	12.8	650.5	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000042557	Sin3a	ENSMUST00000165927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042557	Sin3a	ENSMUST00000168502	ENSMUSP00000128956	TRANSLATION	protein_coding	-	CCDS52805.1	5	1277	0	9.7	12.8	649.2	0	-4,-7	-	-	15.922	ALTERNATIVE:1
ENSMUSG00000032599	Ip6k2	ENSMUST00000193970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032599	Ip6k2	ENSMUST00000192226	ENSMUSP00000141242	TRANSLATION	nonsense_mediated_decay	-	-	2	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000085018	ENSMUSP00000082091	TRANSLATION	protein_coding	-	CCDS23537.1	1	448	11	1.04	1.5	207.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000032599	Ip6k2	ENSMUST00000192028	ENSMUSP00000142277	TRANSLATION	protein_coding	-	-	1	123	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000194782	ENSMUSP00000141461	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000195580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032599	Ip6k2	ENSMUST00000193055	ENSMUSP00000141515	TRANSLATION	protein_coding	start	-	5	31	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000193634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032599	Ip6k2	ENSMUST00000192307	ENSMUSP00000142134	TRANSLATION	protein_coding	-	-	1	98	0	0	2.9	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000194875	ENSMUSP00000142239	TRANSLATION	protein_coding	-	-	2	110	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000195514	ENSMUSP00000141831	TRANSLATION	protein_coding	stop	-	2	151	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032599	Ip6k2	ENSMUST00000193560	ENSMUSP00000141605	TRANSLATION	protein_coding	-	-	1	402	11	1.04	0	207.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000047619	Ddi1	ENSMUST00000051706	ENSMUSP00000053223	TRANSLATION	protein_coding	-	CCDS40527.1	-	408	1	0.8	1.5	230.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094970	Olfr943	ENSMUST00000213507	ENSMUSP00000149205	TRANSLATION	nonsense_mediated_decay	-	-	5	311	0	0.4	2.8	184.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000094970	Olfr943	ENSMUST00000213176	ENSMUSP00000149086	TRANSLATION	protein_coding	-	-	5	311	0	0.4	2.8	184.8	7	-4,-7	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000094970	Olfr943	ENSMUST00000215770	ENSMUSP00000148896	TRANSLATION	protein_coding	-	-	2	311	0	0.4	2.8	184.8	7	-4,-7	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000094970	Olfr943	ENSMUST00000071617	ENSMUSP00000071545	TRANSLATION	protein_coding	-	CCDS23039.1	3	314	0	0.4	4	184.8	7	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000094970	Olfr943	ENSMUST00000213830	ENSMUSP00000150222	TRANSLATION	protein_coding	-	-	3	311	0	0.4	2.8	184.8	7	-4,-7	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000032498	Mlh1	ENSMUST00000135218	ENSMUSP00000143786	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032498	Mlh1	ENSMUST00000123869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032498	Mlh1	ENSMUST00000128795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032498	Mlh1	ENSMUST00000199404	ENSMUSP00000142563	TRANSLATION	protein_coding	start/stop	-	3	155	0	3.75	0	114.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032498	Mlh1	ENSMUST00000123713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032498	Mlh1	ENSMUST00000135695	ENSMUSP00000119170	TRANSLATION	nonsense_mediated_decay	start	-	3	94	1	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032498	Mlh1	ENSMUST00000035079	ENSMUSP00000035079	TRANSLATION	protein_coding	-	CCDS40784.1	1	760	10	16.83	0.5	494.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000032498	Mlh1	ENSMUST00000134316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032498	Mlh1	ENSMUST00000200145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032172	Olfm2	ENSMUST00000034692	ENSMUSP00000034692	TRANSLATION	protein_coding	-	CCDS40546.1	1	448	0	4.8	0.5	427.8	0	-4,-7	-	-	10.602	MINOR
ENSMUSG00000032172	Olfm2	ENSMUST00000217198	ENSMUSP00000151018	TRANSLATION	protein_coding	-	-	3	478	0	5.5	6.4	427.8	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032172	Olfm2	ENSMUST00000215039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032172	Olfm2	ENSMUST00000215999	ENSMUSP00000149231	TRANSLATION	protein_coding	-	-	3	456	0	4.95	1.5	427.8	0	3,-2	-	-	11.088	MINOR
ENSMUSG00000010066	Cacna2d2	ENSMUST00000171809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010066	Cacna2d2	ENSMUST00000170737	ENSMUSP00000125943	TRANSLATION	protein_coding	-	CCDS72305.1	1	1150	3	24.815	1.5	914.2	1	0,2	-	-	14.784	ALTERNATIVE:2
ENSMUSG00000010066	Cacna2d2	ENSMUST00000168532	ENSMUSP00000132512	TRANSLATION	protein_coding	-	CCDS72304.1	1	1156	3	24.69	1.5	914.2	1	0,2	-	-	14.532	ALTERNATIVE:2
ENSMUSG00000010066	Cacna2d2	ENSMUST00000194842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010066	Cacna2d2	ENSMUST00000169354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010066	Cacna2d2	ENSMUST00000164988	ENSMUSP00000130451	TRANSLATION	protein_coding	-	-	5	1157	3	24.49	1.5	913.2	1	0,2	-	-	14.076	ALTERNATIVE:2
ENSMUSG00000010066	Cacna2d2	ENSMUST00000085092	ENSMUSP00000082173	TRANSLATION	protein_coding	-	CCDS52916.1	5	1154	3	24.69	1.5	917.8	1	0,2	-	-	14.748	ALTERNATIVE:2
ENSMUSG00000010066	Cacna2d2	ENSMUST00000010210	ENSMUSP00000010210	TRANSLATION	protein_coding	-	CCDS52917.1	1	1148	3	24.815	1.5	917.7	1	0,2	-	-	14.994	PRINCIPAL:3
ENSMUSG00000010066	Cacna2d2	ENSMUST00000168959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010066	Cacna2d2	ENSMUST00000166799	ENSMUSP00000126029	TRANSLATION	protein_coding	-	-	5	1157	3	24.65	1.5	914.4	1	0,2	-	-	14.466	ALTERNATIVE:2
ENSMUSG00000074345	Tnfaip8l3	ENSMUST00000098760	ENSMUSP00000096356	TRANSLATION	protein_coding	-	CCDS40641.1	1	204	0	1	7.1	251.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074345	Tnfaip8l3	ENSMUST00000214656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032515	Csrnp1	ENSMUST00000213936	ENSMUSP00000149632	TRANSLATION	protein_coding	stop	-	2	119	0	0	0	59.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032515	Csrnp1	ENSMUST00000035101	ENSMUSP00000035101	TRANSLATION	protein_coding	-	CCDS23620.1	1	583	8	0	0.5	301.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032515	Csrnp1	ENSMUST00000215916	ENSMUSP00000149214	TRANSLATION	protein_coding	-	CCDS23620.1	1	583	8	0	0.5	301.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032515	Csrnp1	ENSMUST00000214058	ENSMUSP00000150628	TRANSLATION	protein_coding	-	CCDS23620.1	1	583	8	0	0.5	301.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032515	Csrnp1	ENSMUST00000216929	ENSMUSP00000149661	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000212097	ENSMUSP00000148748	TRANSLATION	protein_coding	stop	-	1	941	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000211838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038708	Golga4	ENSMUST00000211846	ENSMUSP00000148276	TRANSLATION	nonsense_mediated_decay	start	-	3	118	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000212913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038708	Golga4	ENSMUST00000212151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038708	Golga4	ENSMUST00000212274	ENSMUSP00000148370	TRANSLATION	nonsense_mediated_decay	start	-	5	131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000084820	ENSMUSP00000081880	TRANSLATION	protein_coding	-	CCDS40801.1	1	2238	0	2.08	0.5	35.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038708	Golga4	ENSMUST00000212183	ENSMUSP00000148593	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000212461	ENSMUSP00000148311	TRANSLATION	protein_coding	start/stop	-	5	454	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000212593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038708	Golga4	ENSMUST00000211840	ENSMUSP00000148518	TRANSLATION	protein_coding	start	-	1	1251	0	1.816	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038708	Golga4	ENSMUST00000212620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038708	Golga4	ENSMUST00000211826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042045	Sln	ENSMUST00000048485	ENSMUSP00000036950	TRANSLATION	protein_coding	-	CCDS40640.1	1	31	0	1	19.5	82.9	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000066748	Olfr145	ENSMUST00000213688	ENSMUSP00000150284	TRANSLATION	protein_coding	-	CCDS22990.1	5	310	0	0.2	5.1	169.7	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000066748	Olfr145	ENSMUST00000086062	ENSMUSP00000083229	TRANSLATION	protein_coding	-	CCDS22990.1	-	310	0	0.2	5.1	169.7	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000060509	Xcr1	ENSMUST00000182350	ENSMUSP00000138255	TRANSLATION	protein_coding	-	-	1	322	0	0.48	0	137	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050471	Fam118b	ENSMUST00000125087	ENSMUSP00000119747	TRANSLATION	protein_coding	stop	-	5	268	0	0	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050471	Fam118b	ENSMUST00000147256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050471	Fam118b	ENSMUST00000059057	ENSMUSP00000058377	TRANSLATION	protein_coding	-	CCDS22961.1	1	351	0	0	8.8	82.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000050471	Fam118b	ENSMUST00000125124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050471	Fam118b	ENSMUST00000217306	ENSMUSP00000149076	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050471	Fam118b	ENSMUST00000121564	ENSMUSP00000113537	TRANSLATION	protein_coding	-	CCDS22961.1	1	351	0	0	8.8	82.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000050471	Fam118b	ENSMUST00000063782	ENSMUSP00000066281	TRANSLATION	protein_coding	-	CCDS22960.1	1	275	0	0	0.5	59.4	0	-4,-5	-	-	4.32	MINOR
ENSMUSG00000050471	Fam118b	ENSMUST00000133739	ENSMUSP00000121690	TRANSLATION	protein_coding	start	-	1	123	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000050471	Fam118b	ENSMUST00000214230	ENSMUSP00000148906	TRANSLATION	nonsense_mediated_decay	start	-	5	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000111409	Gm49380	ENSMUST00000162126	ENSMUSP00000123938	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	424	8	0	1.5	48.5	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000111409	Gm49380	ENSMUST00000185479	ENSMUSP00000140405	TRANSLATION	protein_coding	-	CCDS23096.1	1	424	8	0	1.5	48.5	2	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031988	Vps26b	ENSMUST00000034470	ENSMUSP00000034470	TRANSLATION	protein_coding	-	CCDS22938.1	1	336	0	6	13.6	441.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031988	Vps26b	ENSMUST00000213917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053747	Sox14	ENSMUST00000054819	ENSMUSP00000091310	TRANSLATION	protein_coding	-	CCDS57695.1	-	240	0	1.33	19.5	127	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000053747	Sox14	ENSMUST00000183065	ENSMUSP00000138239	TRANSLATION	protein_coding	start	-	3	177	0	1	0	94	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057424	Olfr934	ENSMUST00000216823	ENSMUSP00000150864	TRANSLATION	protein_coding	-	CCDS23034.1	5	310	0	0.36	5.2	163.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000057424	Olfr934	ENSMUST00000214324	ENSMUSP00000149799	TRANSLATION	protein_coding	-	CCDS23034.1	5	310	0	0.36	5.2	163.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000057424	Olfr934	ENSMUST00000074211	ENSMUSP00000073835	TRANSLATION	protein_coding	-	CCDS23034.1	-	310	0	0.36	5.2	163.9	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000057191	AB124611	ENSMUST00000086361	ENSMUSP00000083547	TRANSLATION	protein_coding	-	CCDS57661.1	1	226	0	0	0.5	0	0	0,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000057191	AB124611	ENSMUST00000076326	ENSMUSP00000075665	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000057191	AB124611	ENSMUST00000173769	ENSMUSP00000134056	TRANSLATION	protein_coding	-	CCDS22905.2	1	196	0	0	0.5	0	0	0,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000046785	Epm2aip1	ENSMUST00000060711	ENSMUSP00000052904	TRANSLATION	protein_coding	-	CCDS40785.1	-	606	4	0	7.5	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000046785	Epm2aip1	ENSMUST00000200053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046785	Epm2aip1	ENSMUST00000135807	ENSMUSP00000120245	TRANSLATION	protein_coding	-	CCDS40785.1	2	606	4	0	7.5	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000034839	Larp6	ENSMUST00000038407	ENSMUSP00000040309	TRANSLATION	protein_coding	-	CCDS23258.1	1	492	0	1.8	6.3	101.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038717	Atp5l	ENSMUST00000213999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038717	Atp5l	ENSMUST00000216815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038717	Atp5l	ENSMUST00000216380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038717	Atp5l	ENSMUST00000043675	ENSMUSP00000047960	TRANSLATION	protein_coding	-	CCDS40604.1	1	103	0	0	8.8	95.8	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000032350	Gclc	ENSMUST00000034905	ENSMUSP00000034905	TRANSLATION	protein_coding	-	CCDS23354.1	1	637	28	9.85	7.6	606.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000032350	Gclc	ENSMUST00000216848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032350	Gclc	ENSMUST00000216315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032268	Tmprss5	ENSMUST00000070390	ENSMUSP00000064527	TRANSLATION	protein_coding	-	CCDS52789.1	1	445	6	5.7	1.5	365.9	3	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000032268	Tmprss5	ENSMUST00000170426	ENSMUSP00000128662	TRANSLATION	nonsense_mediated_decay	start	-	1	84	0	0.6	0	89.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032268	Tmprss5	ENSMUST00000166272	ENSMUSP00000130069	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0.1	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000032268	Tmprss5	ENSMUST00000171217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032268	Tmprss5	ENSMUST00000167095	ENSMUSP00000131650	TRANSLATION	protein_coding	-	-	5	381	6	5.6	0	365.9	0	-4,-5	-	-	17.802	ALTERNATIVE:2
ENSMUSG00000032268	Tmprss5	ENSMUST00000170246	ENSMUSP00000129482	TRANSLATION	protein_coding	-	-	1	439	6	5.7	0	365.9	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032268	Tmprss5	ENSMUST00000165088	ENSMUSP00000132181	TRANSLATION	protein_coding	-	-	1	455	6	5.7	2.9	365.9	3	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000032263	Bckdhb	ENSMUST00000190637	ENSMUSP00000139684	TRANSLATION	protein_coding	-	CCDS81045.1	1	390	6	8.65	1.5	272.2	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000032263	Bckdhb	ENSMUST00000034801	ENSMUSP00000034801	TRANSLATION	protein_coding	-	CCDS23378.1	1	322	6	8.25	1.7	271.7	0	-4,-5	-	-	17.172	MINOR
ENSMUSG00000032263	Bckdhb	ENSMUST00000189819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032263	Bckdhb	ENSMUST00000188200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032263	Bckdhb	ENSMUST00000190166	ENSMUSP00000140598	TRANSLATION	protein_coding	-	CCDS23378.1	1	322	6	8.25	1.7	271.7	0	-4,-5	-	-	17.172	MINOR
ENSMUSG00000032263	Bckdhb	ENSMUST00000186136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046150	Olfr918	ENSMUST00000215461	ENSMUSP00000150182	TRANSLATION	protein_coding	-	-	5	312	0	0.2	1.5	160.3	6	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000046150	Olfr918	ENSMUST00000055099	ENSMUSP00000057210	TRANSLATION	protein_coding	-	CCDS23022.1	-	325	0	0.2	0.5	160.3	6	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000046150	Olfr918	ENSMUST00000216579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008429	Herpud2	ENSMUST00000214190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008429	Herpud2	ENSMUST00000008573	ENSMUSP00000008573	TRANSLATION	protein_coding	-	CCDS22934.1	1	404	0	2.35	5.1	30.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043087	Olfr855	ENSMUST00000215587	ENSMUSP00000150218	TRANSLATION	protein_coding	-	CCDS85647.1	5	312	0	0.42	3.9	181.7	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000043087	Olfr855	ENSMUST00000061693	ENSMUSP00000054790	TRANSLATION	protein_coding	-	CCDS85647.1	-	312	0	0.42	3.9	181.7	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000032185	Carm1	ENSMUST00000132011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032185	Carm1	ENSMUST00000130100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032185	Carm1	ENSMUST00000115395	ENSMUSP00000111053	TRANSLATION	protein_coding	-	CCDS52736.1	1	585	21	12.75	1.5	237	0	-3,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032185	Carm1	ENSMUST00000139871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032185	Carm1	ENSMUST00000115394	ENSMUSP00000111052	TRANSLATION	protein_coding	-	-	5	651	21	12.75	0	237	0	-3,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000032185	Carm1	ENSMUST00000130032	ENSMUSP00000117243	TRANSLATION	nonsense_mediated_decay	-	-	1	162	0	3	0	201.8	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000032185	Carm1	ENSMUST00000034703	ENSMUSP00000034703	TRANSLATION	protein_coding	-	CCDS22906.1	1	608	21	12.75	1.5	237	0	-3,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000032185	Carm1	ENSMUST00000154049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032185	Carm1	ENSMUST00000216160	ENSMUSP00000150181	TRANSLATION	protein_coding	start	-	2	48	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032185	Carm1	ENSMUST00000147749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032786	Alas1	ENSMUST00000214989	ENSMUSP00000150311	TRANSLATION	protein_coding	start/stop	-	5	166	6	3.33	0	71.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000215222	ENSMUSP00000150950	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	120.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000123601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032786	Alas1	ENSMUST00000214249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032786	Alas1	ENSMUST00000219340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032786	Alas1	ENSMUST00000123115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032786	Alas1	ENSMUST00000219129	ENSMUSP00000151891	TRANSLATION	protein_coding	stop	-	2	244	0	0	0	160.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000133617	ENSMUSP00000122117	TRANSLATION	nonsense_mediated_decay	-	-	5	196	0	0	0	157.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000112524	ENSMUSP00000108143	TRANSLATION	protein_coding	-	CCDS40756.2	1	642	15	7.73	2.7	425.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032786	Alas1	ENSMUST00000143125	ENSMUSP00000119968	TRANSLATION	nonsense_mediated_decay	start	-	5	110	7	2.3	0	58.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000074082	ENSMUSP00000073725	TRANSLATION	protein_coding	-	-	1	641	14	7.73	2.7	413.1	0	-4,-1	-	-	16.59	MINOR
ENSMUSG00000032786	Alas1	ENSMUST00000141118	ENSMUSP00000117014	TRANSLATION	protein_coding	-	CCDS40756.2	5	642	15	7.73	2.7	425.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032786	Alas1	ENSMUST00000134053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044205	Olfr983	ENSMUST00000213087	ENSMUSP00000148541	TRANSLATION	protein_coding	-	-	2	311	0	0	6.4	163.7	6	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000044205	Olfr983	ENSMUST00000050996	ENSMUSP00000083206	TRANSLATION	protein_coding	-	CCDS23074.1	2	315	0	0	3.9	163.7	6	-4,-6	-	-	7.074	PRINCIPAL:2
ENSMUSG00000038895	Zfp653	ENSMUST00000043922	ENSMUSP00000045895	TRANSLATION	protein_coding	-	CCDS22919.1	1	615	20	3.6	1.5	61.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000038895	Zfp653	ENSMUST00000216916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038895	Zfp653	ENSMUST00000216244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038895	Zfp653	ENSMUST00000179605	ENSMUSP00000137064	TRANSLATION	protein_coding	-	CCDS80968.1	1	623	20	3.6	1.5	61.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000096356	Olfr889	ENSMUST00000072290	ENSMUSP00000072137	TRANSLATION	protein_coding	start	-	5	314	0	0.32	1.5	169.2	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000096356	Olfr889	ENSMUST00000217286	ENSMUSP00000148913	TRANSLATION	protein_coding	-	CCDS85655.1	5	309	0	0.32	6.4	169.2	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000096316	Faiml	ENSMUST00000188555	ENSMUSP00000139801	TRANSLATION	protein_coding	-	CCDS57691.1	5	178	0	3.5	17	279.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000096316	Faiml	ENSMUST00000178051	ENSMUSP00000137541	TRANSLATION	protein_coding	-	CCDS57691.1	5	178	0	3.5	17	279.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032324	Tspan3	ENSMUST00000216317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032324	Tspan3	ENSMUST00000216320	ENSMUSP00000148864	TRANSLATION	protein_coding	stop	-	3	201	0	1.45	0	111.8	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000032324	Tspan3	ENSMUST00000214970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032324	Tspan3	ENSMUST00000215906	ENSMUSP00000149496	TRANSLATION	protein_coding	-	-	3	256	0	1.45	0	160.6	6	-4,-2	-	-	9.726	MINOR
ENSMUSG00000032324	Tspan3	ENSMUST00000034876	ENSMUSP00000034876	TRANSLATION	protein_coding	-	CCDS23207.1	1	253	0	1.9	16.3	174.8	6	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032180	Tmed1	ENSMUST00000214285	ENSMUSP00000150642	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0.8	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032180	Tmed1	ENSMUST00000213316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032180	Tmed1	ENSMUST00000034698	ENSMUSP00000034698	TRANSLATION	protein_coding	-	CCDS22904.1	1	227	0	2.75	5.1	149.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000032180	Tmed1	ENSMUST00000214576	ENSMUSP00000150154	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	1.55	0	37.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032180	Tmed1	ENSMUST00000213167	ENSMUSP00000150532	TRANSLATION	protein_coding	start	-	3	129	0	0.8	0	53.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000066607	Insyn1	ENSMUST00000217624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066607	Insyn1	ENSMUST00000085658	ENSMUSP00000082800	TRANSLATION	protein_coding	-	CCDS23243.1	1	292	0	0	5.1	314.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000066607	Insyn1	ENSMUST00000216294	ENSMUSP00000148914	TRANSLATION	protein_coding	-	CCDS23243.1	1	292	0	0	5.1	314.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032313	Tmem266	ENSMUST00000130465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032313	Tmem266	ENSMUST00000034862	ENSMUSP00000034862	TRANSLATION	protein_coding	-	CCDS23203.1	1	538	0	0	1.7	28.8	3	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000032313	Tmem266	ENSMUST00000085754	ENSMUSP00000082906	TRANSLATION	protein_coding	-	-	1	298	0	0	0.5	28.8	3	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000059974	Ntm	ENSMUST00000148606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059974	Ntm	ENSMUST00000155308	ENSMUSP00000119030	TRANSLATION	protein_coding	start	-	5	191	0	3.238	0	57.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059974	Ntm	ENSMUST00000115237	ENSMUSP00000110892	TRANSLATION	protein_coding	-	-	1	344	0	4.88	7.1	152.1	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000059974	Ntm	ENSMUST00000075069	ENSMUSP00000074578	TRANSLATION	protein_coding	-	CCDS22943.1	1	344	0	4.88	4.1	152.1	0	-2,-3	-	-	13.524	MINOR
ENSMUSG00000059974	Ntm	ENSMUST00000152513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059974	Ntm	ENSMUST00000146651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059974	Ntm	ENSMUST00000151977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059974	Ntm	ENSMUST00000126044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059974	Ntm	ENSMUST00000115236	ENSMUSP00000110891	TRANSLATION	protein_coding	-	-	5	316	0	4.48	2.4	152.1	0	1,-3	-	-	11.892	MINOR
ENSMUSG00000059974	Ntm	ENSMUST00000124119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059974	Ntm	ENSMUST00000140118	ENSMUSP00000114810	TRANSLATION	protein_coding	start	-	5	179	0	2.838	0	57.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031966	Glb1l3	ENSMUST00000211353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031966	Glb1l3	ENSMUST00000034448	ENSMUSP00000034448	TRANSLATION	protein_coding	-	-	5	587	12	12.77	0	360.5	0	-4,-7	-	-	16.284	MINOR
ENSMUSG00000031966	Glb1l3	ENSMUST00000210274	ENSMUSP00000147979	TRANSLATION	protein_coding	-	CCDS85650.1	1	662	12	13.37	0.5	369.1	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031966	Glb1l3	ENSMUST00000209592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044292	Olfr978	ENSMUST00000217600	ENSMUSP00000151115	TRANSLATION	protein_coding	-	CCDS23069.1	5	311	0	0.32	5.4	187.3	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044292	Olfr978	ENSMUST00000057161	ENSMUSP00000060106	TRANSLATION	protein_coding	-	CCDS23069.1	-	311	0	0.32	5.4	187.3	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025784	Clec3b	ENSMUST00000026890	ENSMUSP00000026890	TRANSLATION	protein_coding	-	CCDS23656.1	1	202	10	2.6	6.3	64.4	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000050578	Mmp13	ENSMUST00000015394	ENSMUSP00000015394	TRANSLATION	protein_coding	-	CCDS22803.1	1	472	29	9.28	6.3	406.9	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000043953	Ccrl2	ENSMUST00000195968	ENSMUSP00000143105	TRANSLATION	protein_coding	stop	-	2	133	0	0.8	0	32.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000043953	Ccrl2	ENSMUST00000199839	ENSMUSP00000143116	TRANSLATION	protein_coding	-	CCDS23582.1	1	360	0	1.28	1.5	77	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043953	Ccrl2	ENSMUST00000111888	ENSMUSP00000107519	TRANSLATION	protein_coding	-	CCDS23582.1	1	360	0	1.28	1.5	77	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035382	Pcsk7	ENSMUST00000215535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035382	Pcsk7	ENSMUST00000216672	ENSMUSP00000150393	TRANSLATION	protein_coding	-	CCDS40609.1	1	770	15	9.776	0.5	312.5	1	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035382	Pcsk7	ENSMUST00000216614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035382	Pcsk7	ENSMUST00000213854	ENSMUSP00000150379	TRANSLATION	nonsense_mediated_decay	start	-	3	86	2	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035382	Pcsk7	ENSMUST00000216504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035382	Pcsk7	ENSMUST00000039059	ENSMUSP00000047508	TRANSLATION	protein_coding	-	CCDS40609.1	1	770	15	9.776	0.5	312.5	1	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035382	Pcsk7	ENSMUST00000214425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035382	Pcsk7	ENSMUST00000215189	ENSMUSP00000150500	TRANSLATION	nonsense_mediated_decay	-	-	1	518	15	7.47	0	224.8	1	0,-2	-	-	-1	MINOR
ENSMUSG00000035382	Pcsk7	ENSMUST00000216514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094985	Topaz1	ENSMUST00000178679	ENSMUSP00000136304	TRANSLATION	protein_coding	-	CCDS57718.1	1	1653	4	0	0.5	509.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000094985	Topaz1	ENSMUST00000213519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037705	Tecta	ENSMUST00000159603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037705	Tecta	ENSMUST00000042190	ENSMUSP00000040262	TRANSLATION	protein_coding	-	CCDS23087.1	1	2155	0	4.74	4	1160.7	0	0,-4	-	-	13	PRINCIPAL:3
ENSMUSG00000037705	Tecta	ENSMUST00000160940	ENSMUSP00000125370	TRANSLATION	protein_coding	-	CCDS85660.1	1	2150	0	4.74	3.9	1160.7	0	0,-4	-	-	12.967	ALTERNATIVE:2
ENSMUSG00000091028	Gm10722	ENSMUST00000151376	ENSMUSP00000132394	TRANSLATION	protein_coding	start/stop	-	5	217	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000044976	Wdr72	ENSMUST00000098564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044976	Wdr72	ENSMUST00000184725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044976	Wdr72	ENSMUST00000149439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044976	Wdr72	ENSMUST00000055879	ENSMUSP00000057320	TRANSLATION	protein_coding	-	CCDS23338.2	1	1114	0	3.31	0.5	0	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000044976	Wdr72	ENSMUST00000215440	ENSMUSP00000149349	TRANSLATION	protein_coding	-	-	5	1102	0	3.31	1.5	0	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000037410	Tbc1d2b	ENSMUST00000128874	ENSMUSP00000140684	TRANSLATION	protein_coding	-	-	1	228	9	2.06	0	33.6	0	-4,-5	-	-	6.762	MINOR
ENSMUSG00000037410	Tbc1d2b	ENSMUST00000144348	ENSMUSP00000118947	TRANSLATION	nonsense_mediated_decay	-	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037410	Tbc1d2b	ENSMUST00000144646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037410	Tbc1d2b	ENSMUST00000041767	ENSMUSP00000045413	TRANSLATION	protein_coding	-	CCDS23401.1	1	965	9	4.68	0.5	232.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090626	Tex9	ENSMUST00000184066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090626	Tex9	ENSMUST00000184624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090626	Tex9	ENSMUST00000184734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090626	Tex9	ENSMUST00000184125	ENSMUSP00000139026	TRANSLATION	protein_coding	-	CCDS40685.1	1	387	0	0	1.7	0	0	-4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000090626	Tex9	ENSMUST00000183856	ENSMUSP00000139247	TRANSLATION	nonsense_mediated_decay	-	-	5	332	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000090626	Tex9	ENSMUST00000183501	ENSMUSP00000138882	TRANSLATION	protein_coding	start/stop	-	5	158	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090626	Tex9	ENSMUST00000184312	ENSMUSP00000138844	TRANSLATION	nonsense_mediated_decay	-	-	1	100	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000090626	Tex9	ENSMUST00000185151	ENSMUSP00000138929	TRANSLATION	protein_coding	stop	-	2	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090626	Tex9	ENSMUST00000085358	ENSMUSP00000082467	TRANSLATION	protein_coding	-	-	1	188	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000090626	Tex9	ENSMUST00000183574	ENSMUSP00000139386	TRANSLATION	protein_coding	-	-	1	329	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000090626	Tex9	ENSMUST00000185106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090626	Tex9	ENSMUST00000183399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090626	Tex9	ENSMUST00000183551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090626	Tex9	ENSMUST00000184831	ENSMUSP00000138999	TRANSLATION	protein_coding	-	-	5	202	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000090626	Tex9	ENSMUST00000183428	ENSMUSP00000139326	TRANSLATION	nonsense_mediated_decay	start	-	5	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090626	Tex9	ENSMUST00000184557	ENSMUSP00000139212	TRANSLATION	nonsense_mediated_decay	-	-	1	281	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032318	Isl2	ENSMUST00000034869	ENSMUSP00000034869	TRANSLATION	protein_coding	-	CCDS23205.1	1	359	16	3.6	6.6	163.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000032318	Isl2	ENSMUST00000165302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032318	Isl2	ENSMUST00000164373	ENSMUSP00000130638	TRANSLATION	nonsense_mediated_decay	-	-	1	174	8	1	0	50	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032318	Isl2	ENSMUST00000114290	ENSMUSP00000109929	TRANSLATION	nonsense_mediated_decay	-	-	1	174	8	1	0	50	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032318	Isl2	ENSMUST00000175950	ENSMUSP00000139485	TRANSLATION	protein_coding	stop	-	3	151	15	2	0	105.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045322	Tlr9	ENSMUST00000062241	ENSMUSP00000082207	TRANSLATION	protein_coding	-	CCDS40755.1	1	1032	0	1	0.5	137.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032035	Ets1	ENSMUST00000238819	ENSMUSP00000159086	TRANSLATION	protein_coding	-	-	-	484	0	5.65	6.4	246.1	0	-4,-6	-	-	13.832	MINOR
ENSMUSG00000032035	Ets1	ENSMUST00000184887	ENSMUSP00000138951	TRANSLATION	protein_coding	-	-	5	272	0	2.15	0	118.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032035	Ets1	ENSMUST00000050797	ENSMUSP00000051303	TRANSLATION	protein_coding	-	CCDS40572.1	1	353	0	4.65	6.3	246.1	0	-4,-5	-	-	11.798	MINOR
ENSMUSG00000032035	Ets1	ENSMUST00000034534	ENSMUSP00000034534	TRANSLATION	protein_coding	-	CCDS22954.1	1	440	0	5.65	12.8	246.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032035	Ets1	ENSMUST00000183879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032035	Ets1	ENSMUST00000184364	ENSMUSP00000139107	TRANSLATION	protein_coding	-	-	5	224	0	3.5	1.2	127.3	0	-4,-5	-	-	1.766	MINOR
ENSMUSG00000032035	Ets1	ENSMUST00000184110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040146	Rgl3	ENSMUST00000215851	ENSMUSP00000150195	TRANSLATION	nonsense_mediated_decay	-	-	2	87	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040146	Rgl3	ENSMUST00000214713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040146	Rgl3	ENSMUST00000213130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040146	Rgl3	ENSMUST00000214026	ENSMUSP00000148965	TRANSLATION	nonsense_mediated_decay	-	-	1	709	0	10.05	0.5	280.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040146	Rgl3	ENSMUST00000214089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040146	Rgl3	ENSMUST00000213558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040146	Rgl3	ENSMUST00000045726	ENSMUSP00000035726	TRANSLATION	protein_coding	-	CCDS22916.1	1	709	0	10.05	0.5	280.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061457	Olfr871	ENSMUST00000073122	ENSMUSP00000072865	TRANSLATION	protein_coding	-	CCDS22873.1	-	311	0	0.42	4	174.8	0	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000057710	9630041A04Rik	ENSMUST00000112841	ENSMUSP00000108460	TRANSLATION	protein_coding	-	-	1	205	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000057710	9630041A04Rik	ENSMUST00000214127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057710	9630041A04Rik	ENSMUST00000214563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057710	9630041A04Rik	ENSMUST00000214589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079235	Ccdc13	ENSMUST00000140929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079235	Ccdc13	ENSMUST00000155511	ENSMUSP00000128061	TRANSLATION	nonsense_mediated_decay	start	-	1	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079235	Ccdc13	ENSMUST00000146716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079235	Ccdc13	ENSMUST00000126851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079235	Ccdc13	ENSMUST00000142783	ENSMUSP00000130887	TRANSLATION	protein_coding	start	-	2	254	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000079235	Ccdc13	ENSMUST00000135986	ENSMUSP00000114787	TRANSLATION	protein_coding	-	CCDS57717.1	5	709	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000059106	Olfr961	ENSMUST00000076548	ENSMUSP00000075863	TRANSLATION	protein_coding	-	CCDS23055.1	-	314	0	0.2	3.9	171.1	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000059106	Olfr961	ENSMUST00000219295	ENSMUSP00000151840	TRANSLATION	protein_coding	-	CCDS23055.1	5	314	0	0.2	3.9	171.1	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000010660	Plcd1	ENSMUST00000214470	ENSMUSP00000149813	TRANSLATION	protein_coding	-	-	1	782	14	13.75	1.7	573.5	0	-4,0	-	-	17.922	MINOR
ENSMUSG00000010660	Plcd1	ENSMUST00000010804	ENSMUSP00000010804	TRANSLATION	protein_coding	-	CCDS23607.1	1	756	14	13.95	7.5	573.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000010660	Plcd1	ENSMUST00000213464	ENSMUSP00000149676	TRANSLATION	nonsense_mediated_decay	-	-	1	503	7	8.35	0	362.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010660	Plcd1	ENSMUST00000214491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013584	Aldh1a2	ENSMUST00000034723	ENSMUSP00000034723	TRANSLATION	protein_coding	-	CCDS52852.1	1	518	26	12.25	13.3	617.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047897	Ripply2	ENSMUST00000058846	ENSMUSP00000055369	TRANSLATION	protein_coding	-	CCDS40715.1	1	128	0	0	1.5	123.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047897	Ripply2	ENSMUST00000188187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096794	Olfr905	ENSMUST00000051111	ENSMUSP00000057998	TRANSLATION	protein_coding	-	CCDS23012.1	-	310	0	0.36	6.4	170.3	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096794	Olfr905	ENSMUST00000214377	ENSMUSP00000150357	TRANSLATION	protein_coding	-	CCDS23012.1	5	310	0	0.36	6.4	170.3	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032562	Gnai2	ENSMUST00000195762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032562	Gnai2	ENSMUST00000193835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032562	Gnai2	ENSMUST00000195231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032562	Gnai2	ENSMUST00000193394	ENSMUSP00000141472	TRANSLATION	protein_coding	stop	-	3	160	10	3.5	0	157.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032562	Gnai2	ENSMUST00000192615	ENSMUSP00000142326	TRANSLATION	protein_coding	-	CCDS23502.1	1	355	24	7.75	21.5	418.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032562	Gnai2	ENSMUST00000193876	ENSMUSP00000142060	TRANSLATION	protein_coding	stop	-	5	39	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032562	Gnai2	ENSMUST00000193372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032562	Gnai2	ENSMUST00000055704	ENSMUSP00000057543	TRANSLATION	protein_coding	-	CCDS23502.1	1	355	24	7.75	21.5	418.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032562	Gnai2	ENSMUST00000192837	ENSMUSP00000141929	TRANSLATION	protein_coding	-	-	5	85	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032562	Gnai2	ENSMUST00000193538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032412	Atp1b3	ENSMUST00000034983	ENSMUSP00000034983	TRANSLATION	protein_coding	-	CCDS23414.1	1	278	3	4.5	2.7	317.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032412	Atp1b3	ENSMUST00000187341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032412	Atp1b3	ENSMUST00000190045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032360	Hcrtr2	ENSMUST00000184757	ENSMUSP00000139377	TRANSLATION	protein_coding	-	-	1	443	0	5.64	6	313.4	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032360	Hcrtr2	ENSMUST00000184200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032360	Hcrtr2	ENSMUST00000063140	ENSMUSP00000058230	TRANSLATION	protein_coding	-	CCDS23350.1	1	460	0	5.64	2.7	313.4	7	-4,-7	-	-	12.68	MINOR
ENSMUSG00000032187	Smarca4	ENSMUST00000098948	ENSMUSP00000096547	TRANSLATION	protein_coding	-	CCDS52737.1	1	1617	6	15.6	6.3	526.1	0	-4,-5	-	-	19.964	ALTERNATIVE:1
ENSMUSG00000032187	Smarca4	ENSMUST00000174008	ENSMUSP00000133922	TRANSLATION	protein_coding	-	CCDS57662.1	1	1613	6	15.6	6.3	526.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000032187	Smarca4	ENSMUST00000172996	ENSMUSP00000133535	TRANSLATION	protein_coding	start/stop	-	1	1267	6	12.3	0	456.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032187	Smarca4	ENSMUST00000034707	ENSMUSP00000034707	TRANSLATION	protein_coding	-	CCDS22909.1	1	1614	6	15.6	6.3	526.1	0	-4,-5	-	-	19.964	PRINCIPAL:3
ENSMUSG00000046240	Hepacam	ENSMUST00000215951	ENSMUSP00000150856	TRANSLATION	nonsense_mediated_decay	-	-	3	69	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000046240	Hepacam	ENSMUST00000051839	ENSMUSP00000054105	TRANSLATION	protein_coding	-	CCDS22976.1	1	418	0	2.29	7.8	81.6	0	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041523	Upk2	ENSMUST00000047740	ENSMUSP00000040481	TRANSLATION	protein_coding	-	CCDS23112.1	1	184	0	0	7.5	362.9	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000032050	Rdx	ENSMUST00000238858	ENSMUSP00000158900	TRANSLATION	protein_coding	-	-	-	604	0	11.3	4.8	507.2	0	-4,-5	-	-	13.407	MINOR
ENSMUSG00000032050	Rdx	ENSMUST00000000590	ENSMUSP00000000590	TRANSLATION	protein_coding	-	CCDS40634.1	1	583	0	11.3	9.1	507.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032050	Rdx	ENSMUST00000061352	ENSMUSP00000055303	TRANSLATION	protein_coding	-	CCDS52793.1	1	389	0	7.5	0.5	252.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032050	Rdx	ENSMUST00000163153	ENSMUSP00000128249	TRANSLATION	protein_coding	-	CCDS40634.1	1	583	0	11.3	9.1	507.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034973	Dop1a	ENSMUST00000186290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000186715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000034987	ENSMUSP00000034987	TRANSLATION	protein_coding	-	CCDS52876.1	5	2462	0	0	6.3	383.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000034973	Dop1a	ENSMUST00000187348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000189817	ENSMUSP00000139642	TRANSLATION	nonsense_mediated_decay	start	-	1	279	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034973	Dop1a	ENSMUST00000187427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000190834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000185919	ENSMUSP00000140040	TRANSLATION	nonsense_mediated_decay	-	-	5	1706	0	0	0	383.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034973	Dop1a	ENSMUST00000188675	ENSMUSP00000139413	TRANSLATION	protein_coding	stop	-	1	718	0	0	0	383.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034973	Dop1a	ENSMUST00000189564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000187607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000186418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000186841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000190957	ENSMUSP00000140740	TRANSLATION	protein_coding	-	CCDS52876.1	5	2462	0	0	6.3	383.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000034973	Dop1a	ENSMUST00000190407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000185297	ENSMUSP00000140258	TRANSLATION	protein_coding	start	-	1	385	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034973	Dop1a	ENSMUST00000190906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034973	Dop1a	ENSMUST00000185840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032551	1110059G10Rik	ENSMUST00000035154	ENSMUSP00000035154	TRANSLATION	protein_coding	-	CCDS23650.1	1	155	0	0	6.3	99.9	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000032551	1110059G10Rik	ENSMUST00000215129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032551	1110059G10Rik	ENSMUST00000118422	ENSMUSP00000112461	TRANSLATION	protein_coding	-	-	1	46	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000032340	Neo1	ENSMUST00000215165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032340	Neo1	ENSMUST00000068664	ENSMUSP00000063656	TRANSLATION	protein_coding	-	CCDS23246.1	1	1492	0	21.88	0.5	888.7	2	-1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000032340	Neo1	ENSMUST00000217545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032340	Neo1	ENSMUST00000214547	ENSMUSP00000150600	TRANSLATION	protein_coding	-	-	1	1465	0	21.45	0.5	888.7	2	-1,-3	-	-	11.142	ALTERNATIVE:2
ENSMUSG00000032340	Neo1	ENSMUST00000215026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032340	Neo1	ENSMUST00000216964	ENSMUSP00000149424	TRANSLATION	protein_coding	start/stop	-	5	405	0	8.5	0	228.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032579	Hemk1	ENSMUST00000128396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032579	Hemk1	ENSMUST00000194735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032579	Hemk1	ENSMUST00000118051	ENSMUSP00000112882	TRANSLATION	protein_coding	-	-	3	121	4	2.332	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000032579	Hemk1	ENSMUST00000128895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032579	Hemk1	ENSMUST00000035196	ENSMUSP00000035196	TRANSLATION	protein_coding	-	CCDS23488.1	1	340	18	5.662	1.5	41.2	0	-1,1	-	-	18	PRINCIPAL:1
ENSMUSG00000032579	Hemk1	ENSMUST00000194260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032579	Hemk1	ENSMUST00000148165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032396	Dis3l	ENSMUST00000113890	ENSMUSP00000109522	TRANSLATION	protein_coding	-	CCDS23280.1	1	970	1	9.02	5.1	301.6	0	-4,-7	-	-	13.242	MINOR
ENSMUSG00000032396	Dis3l	ENSMUST00000144257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032396	Dis3l	ENSMUST00000128129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032396	Dis3l	ENSMUST00000120760	ENSMUSP00000113503	TRANSLATION	protein_coding	-	CCDS23280.1	1	970	1	9.02	5.1	301.6	0	-4,-7	-	-	13.242	MINOR
ENSMUSG00000032396	Dis3l	ENSMUST00000168844	ENSMUSP00000129772	TRANSLATION	protein_coding	-	CCDS52832.1	1	1053	4	9.9	5.1	301.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032396	Dis3l	ENSMUST00000134843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032396	Dis3l	ENSMUST00000154076	ENSMUSP00000115236	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000032396	Dis3l	ENSMUST00000068367	ENSMUSP00000063830	TRANSLATION	protein_coding	-	CCDS23280.1	1	970	1	9.02	5.1	301.6	0	-4,-7	-	-	13.242	MINOR
ENSMUSG00000052625	Olfr851	ENSMUST00000214130	ENSMUSP00000149033	TRANSLATION	protein_coding	-	CCDS22859.1	5	312	0	0.42	1.5	183.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052625	Olfr851	ENSMUST00000064582	ENSMUSP00000066500	TRANSLATION	protein_coding	-	CCDS22859.1	-	312	0	0.42	1.5	183.2	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061536	Sec22c	ENSMUST00000078547	ENSMUSP00000077628	TRANSLATION	protein_coding	-	CCDS23634.1	1	303	0	2.186	7.5	41.1	2	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000061536	Sec22c	ENSMUST00000111560	ENSMUSP00000107185	TRANSLATION	protein_coding	-	CCDS23634.1	1	303	0	2.186	7.5	41.1	2	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000061536	Sec22c	ENSMUST00000154978	ENSMUSP00000123170	TRANSLATION	protein_coding	stop	-	2	38	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000061536	Sec22c	ENSMUST00000215056	ENSMUSP00000149594	TRANSLATION	protein_coding	start	-	3	220	0	1.12	0	27.4	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000061536	Sec22c	ENSMUST00000132733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061536	Sec22c	ENSMUST00000139193	ENSMUSP00000114270	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0.64	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000061536	Sec22c	ENSMUST00000214595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031995	St14	ENSMUST00000217404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031995	St14	ENSMUST00000133904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031995	St14	ENSMUST00000123557	ENSMUSP00000121971	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031995	St14	ENSMUST00000034478	ENSMUSP00000034478	TRANSLATION	protein_coding	-	CCDS22948.1	1	855	15	4.8	5.1	528.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000031995	St14	ENSMUST00000148789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031995	St14	ENSMUST00000214418	ENSMUSP00000150666	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056919	Cep162	ENSMUST00000144137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056919	Cep162	ENSMUST00000093802	ENSMUSP00000091319	TRANSLATION	protein_coding	-	CCDS52879.1	1	1403	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056919	Cep162	ENSMUST00000188289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056919	Cep162	ENSMUST00000139301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034487	Poglut3	ENSMUST00000214164	ENSMUSP00000149383	TRANSLATION	protein_coding	start	-	3	120	0	0.84	0	74.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034487	Poglut3	ENSMUST00000037853	ENSMUSP00000039313	TRANSLATION	protein_coding	-	CCDS23182.1	1	503	0	4.68	0.5	316.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002028	Kmt2a	ENSMUST00000215489	ENSMUSP00000149173	TRANSLATION	protein_coding	start/stop	-	5	173	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002028	Kmt2a	ENSMUST00000128768	ENSMUSP00000122541	TRANSLATION	protein_coding	stop	-	5	1438	4	2.93	0	51.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002028	Kmt2a	ENSMUST00000138119	ENSMUSP00000138138	TRANSLATION	nonsense_mediated_decay	start	-	1	639	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002028	Kmt2a	ENSMUST00000002095	ENSMUSP00000002095	TRANSLATION	protein_coding	-	CCDS40603.1	5	3963	40	12.57	0.5	369.4	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000002028	Kmt2a	ENSMUST00000114689	ENSMUSP00000110337	TRANSLATION	protein_coding	-	-	5	3966	40	12.57	0.5	364.6	0	-4,-7	-	-	17.712	ALTERNATIVE:2
ENSMUSG00000002028	Kmt2a	ENSMUST00000152241	ENSMUSP00000138767	TRANSLATION	nonsense_mediated_decay	start	-	5	629	4	1.75	0	51.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057982	Zfp809	ENSMUST00000213350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057982	Zfp809	ENSMUST00000072465	ENSMUSP00000072286	TRANSLATION	protein_coding	-	CCDS40560.1	1	402	28	1.8	0.5	226.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000057982	Zfp809	ENSMUST00000215583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057982	Zfp809	ENSMUST00000215902	ENSMUSP00000150580	TRANSLATION	protein_coding	-	-	1	60	0	1	0	83.9	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000057982	Zfp809	ENSMUST00000215618	ENSMUSP00000151180	TRANSLATION	protein_coding	-	-	1	354	28	1.8	0.5	226.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000057982	Zfp809	ENSMUST00000213371	ENSMUSP00000150314	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	1	0	81.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055334	Snupn	ENSMUST00000068856	ENSMUSP00000067200	TRANSLATION	protein_coding	-	CCDS23214.1	1	358	0	7.3	2.7	64	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041361	Myzap	ENSMUST00000169573	ENSMUSP00000127028	TRANSLATION	protein_coding	-	-	5	438	0	0	2.4	0	0	-3,-1	-	-	0.528	MINOR
ENSMUSG00000041361	Myzap	ENSMUST00000093823	ENSMUSP00000091342	TRANSLATION	protein_coding	-	CCDS23327.1	1	466	0	0	6.3	0	0	-3,-1	-	-	2	PRINCIPAL:1
ENSMUSG00000041361	Myzap	ENSMUST00000171977	ENSMUSP00000131906	TRANSLATION	protein_coding	stop	-	5	99	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041361	Myzap	ENSMUST00000163708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041361	Myzap	ENSMUST00000166112	ENSMUSP00000131643	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000103409	Lsmem2	ENSMUST00000238519	ENSMUSP00000158647	TRANSLATION	protein_coding	-	-	-	150	0	0	2.7	265.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000103409	Lsmem2	ENSMUST00000191791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007656	Arpp19	ENSMUST00000169448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007656	Arpp19	ENSMUST00000168166	ENSMUSP00000126618	TRANSLATION	protein_coding	-	CCDS23340.1	2	112	1	0	15.3	41.7	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000007656	Arpp19	ENSMUST00000170308	ENSMUSP00000132350	TRANSLATION	protein_coding	-	CCDS23340.1	2	112	1	0	15.3	41.7	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000007656	Arpp19	ENSMUST00000169492	ENSMUSP00000128921	TRANSLATION	protein_coding	-	CCDS52859.1	2	145	1	0	1.5	41.7	0	-4,-6	-	-	6.14	MINOR
ENSMUSG00000007656	Arpp19	ENSMUST00000169188	ENSMUSP00000131922	TRANSLATION	protein_coding	-	-	5	71	1	0	0	33.7	0	-4,-5	-	-	4.848	MINOR
ENSMUSG00000007656	Arpp19	ENSMUST00000166549	ENSMUSP00000131987	TRANSLATION	protein_coding	-	-	1	96	1	0	12	41.7	0	-4,-5	-	-	9.076	ALTERNATIVE:1
ENSMUSG00000007656	Arpp19	ENSMUST00000167885	ENSMUSP00000131597	TRANSLATION	protein_coding	-	-	3	96	1	0	12	41.7	0	-4,-5	-	-	9.076	ALTERNATIVE:1
ENSMUSG00000007656	Arpp19	ENSMUST00000170310	ENSMUSP00000125825	TRANSLATION	protein_coding	-	-	3	96	1	0	12	41.7	0	-4,-5	-	-	9.076	ALTERNATIVE:1
ENSMUSG00000007656	Arpp19	ENSMUST00000164467	ENSMUSP00000130730	TRANSLATION	nonsense_mediated_decay	-	-	3	112	1	0	15.3	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007656	Arpp19	ENSMUST00000007800	ENSMUSP00000007800	TRANSLATION	protein_coding	-	CCDS23340.1	1	112	1	0	15.3	41.7	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000007656	Arpp19	ENSMUST00000168301	ENSMUSP00000132802	TRANSLATION	protein_coding	-	-	5	46	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035048	Anapc13	ENSMUST00000038673	ENSMUSP00000039761	TRANSLATION	protein_coding	-	CCDS40744.1	5	74	0	2	21.5	69	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035048	Anapc13	ENSMUST00000188398	ENSMUSP00000140325	TRANSLATION	protein_coding	-	CCDS40744.1	2	74	0	2	21.5	69	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035048	Anapc13	ENSMUST00000190279	ENSMUSP00000140967	TRANSLATION	protein_coding	-	CCDS40744.1	1	74	0	2	21.5	69	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035048	Anapc13	ENSMUST00000186693	ENSMUSP00000139762	TRANSLATION	protein_coding	-	CCDS40744.1	2	74	0	2	21.5	69	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035048	Anapc13	ENSMUST00000190354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078934	Pate13	ENSMUST00000176153	ENSMUSP00000135716	TRANSLATION	protein_coding	-	-	5	137	0	0	0.5	0	0	1,-3	-	-	0	PRINCIPAL:5
ENSMUSG00000078934	Pate13	ENSMUST00000176049	ENSMUSP00000149669	TRANSLATION	protein_coding	-	-	2	93	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043719	Col6a6	ENSMUST00000166431	ENSMUSP00000125765	TRANSLATION	protein_coding	-	-	5	2265	19	11.409	1.5	926.9	0	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000043719	Col6a6	ENSMUST00000098441	ENSMUSP00000096040	TRANSLATION	protein_coding	-	CCDS52906.1	5	2265	19	11.409	1.5	926.9	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000043719	Col6a6	ENSMUST00000060896	ENSMUSP00000060840	TRANSLATION	protein_coding	-	CCDS23468.1	1	1182	19	2.22	0.5	747.1	0	1,-2	-	-	6	MINOR
ENSMUSG00000062296	Trank1	ENSMUST00000200151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062296	Trank1	ENSMUST00000200272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062296	Trank1	ENSMUST00000078626	ENSMUSP00000077697	TRANSLATION	protein_coding	-	CCDS52942.1	5	2999	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000062296	Trank1	ENSMUST00000196945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062296	Trank1	ENSMUST00000197650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062296	Trank1	ENSMUST00000197049	ENSMUSP00000143534	TRANSLATION	protein_coding	stop	-	2	142	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062296	Trank1	ENSMUST00000198890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050627	Gpd1l	ENSMUST00000146266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050627	Gpd1l	ENSMUST00000084853	ENSMUSP00000081913	TRANSLATION	protein_coding	-	-	1	320	28	7.25	0	317.6	0	-4,-7	-	-	14.292	MINOR
ENSMUSG00000050627	Gpd1l	ENSMUST00000146623	ENSMUSP00000117509	TRANSLATION	protein_coding	-	CCDS23598.1	1	351	28	8.25	18.2	346.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000050627	Gpd1l	ENSMUST00000129305	ENSMUSP00000123212	TRANSLATION	protein_coding	-	-	1	117	9	3	0	99.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000054087	Fbxw28	ENSMUST00000112040	ENSMUSP00000107671	TRANSLATION	protein_coding	-	CCDS52932.1	1	453	0	2.1	0.5	43.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000054087	Fbxw28	ENSMUST00000112039	ENSMUSP00000107670	TRANSLATION	protein_coding	-	CCDS52933.1	1	466	0	2.1	0.5	43.1	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000054087	Fbxw28	ENSMUST00000200156	ENSMUSP00000143361	TRANSLATION	protein_coding	-	-	1	413	0	2.1	0.5	43.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000054087	Fbxw28	ENSMUST00000196351	ENSMUSP00000143357	TRANSLATION	protein_coding	stop	-	3	214	0	1.94	0	43.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037287	Tbcel	ENSMUST00000134374	ENSMUSP00000114275	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037287	Tbcel	ENSMUST00000128959	ENSMUSP00000121164	TRANSLATION	protein_coding	-	CCDS23088.1	5	424	0	3.115	17	27.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037287	Tbcel	ENSMUST00000066148	ENSMUSP00000067882	TRANSLATION	protein_coding	-	CCDS23088.1	1	424	0	3.115	17	27.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037287	Tbcel	ENSMUST00000125995	ENSMUSP00000114721	TRANSLATION	protein_coding	-	CCDS23088.1	1	424	0	3.115	17	27.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037287	Tbcel	ENSMUST00000142775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037287	Tbcel	ENSMUST00000066179	ENSMUSP00000065125	TRANSLATION	protein_coding	-	-	1	442	0	3.115	1.5	27.4	0	-4,-5	-	-	12.124	MINOR
ENSMUSG00000037287	Tbcel	ENSMUST00000138506	ENSMUSP00000116616	TRANSLATION	protein_coding	-	CCDS23088.1	5	424	0	3.115	17	27.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037287	Tbcel	ENSMUST00000213428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002033	Cd3g	ENSMUST00000159019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002033	Cd3g	ENSMUST00000002101	ENSMUSP00000002101	TRANSLATION	protein_coding	-	CCDS23123.1	1	182	0	1.66	2.7	124.6	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000002033	Cd3g	ENSMUST00000160886	ENSMUSP00000125151	TRANSLATION	protein_coding	stop	-	5	100	0	1	0	89.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000001946	Esam	ENSMUST00000002011	ENSMUSP00000002011	TRANSLATION	protein_coding	-	CCDS22979.1	1	394	0	4.068	2.9	70.4	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000001946	Esam	ENSMUST00000144596	ENSMUSP00000114632	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001946	Esam	ENSMUST00000214142	ENSMUSP00000149283	TRANSLATION	nonsense_mediated_decay	start	-	5	28	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001946	Esam	ENSMUST00000123198	ENSMUSP00000116300	TRANSLATION	protein_coding	stop	-	3	71	0	0.81	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001946	Esam	ENSMUST00000146860	ENSMUSP00000122473	TRANSLATION	protein_coding	stop	-	5	252	0	4.068	0	70.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000001946	Esam	ENSMUST00000131832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090693	Trim43a	ENSMUST00000215498	ENSMUSP00000149926	TRANSLATION	protein_coding	stop	-	2	6	0	0.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090693	Trim43a	ENSMUST00000164661	ENSMUSP00000127527	TRANSLATION	protein_coding	-	CCDS23389.1	1	445	8	2.0484	0.5	30	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090693	Trim43a	ENSMUST00000216686	ENSMUSP00000150842	TRANSLATION	protein_coding	stop	-	5	35	0	0.4884	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032495	Lrrc2	ENSMUST00000196598	ENSMUSP00000143319	TRANSLATION	nonsense_mediated_decay	start	-	3	61	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032495	Lrrc2	ENSMUST00000196834	ENSMUSP00000142360	TRANSLATION	protein_coding	stop	-	3	184	0	3.4	0	32.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032495	Lrrc2	ENSMUST00000035076	ENSMUSP00000035076	TRANSLATION	protein_coding	-	CCDS23580.1	1	371	0	5.53	2.7	61.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032101	Ddx25	ENSMUST00000034612	ENSMUSP00000034612	TRANSLATION	protein_coding	-	CCDS52753.1	1	484	15	8.5	4	197.9	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000039488	Cntn5	ENSMUST00000074133	ENSMUSP00000073769	TRANSLATION	protein_coding	-	CCDS52722.1	5	1098	0	19.85	2.7	393.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000039488	Cntn5	ENSMUST00000179049	ENSMUSP00000135903	TRANSLATION	protein_coding	-	CCDS52721.1	5	893	0	16.85	0.5	319.2	0	2,-3	-	-	1.518	MINOR
ENSMUSG00000039488	Cntn5	ENSMUST00000160216	ENSMUSP00000124327	TRANSLATION	protein_coding	-	CCDS52722.1	5	1098	0	19.85	2.7	393.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000039488	Cntn5	ENSMUST00000160358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039488	Cntn5	ENSMUST00000162484	ENSMUSP00000124214	TRANSLATION	protein_coding	-	CCDS52721.1	1	893	0	16.85	0.5	319.2	0	2,-3	-	-	1.518	MINOR
ENSMUSG00000079083	Jrkl	ENSMUST00000110582	ENSMUSP00000128798	TRANSLATION	protein_coding	-	CCDS57650.1	-	523	0	0	6.3	304.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031937	Vstm5	ENSMUST00000034413	ENSMUSP00000034413	TRANSLATION	protein_coding	-	CCDS22833.1	1	199	0	0	6.3	22.8	0	-1,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000045994	B3gat1	ENSMUST00000115269	ENSMUSP00000110924	TRANSLATION	protein_coding	-	CCDS80970.1	1	347	18	2.75	11.8	252.4	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000045994	B3gat1	ENSMUST00000161431	ENSMUSP00000124752	TRANSLATION	protein_coding	-	CCDS22936.1	5	334	18	2.75	6.4	252.4	2	-1,-5	-	-	19.5	MINOR
ENSMUSG00000045994	B3gat1	ENSMUST00000159799	ENSMUSP00000124438	TRANSLATION	protein_coding	-	CCDS80970.1	1	347	18	2.75	11.8	252.4	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000045994	B3gat1	ENSMUST00000160899	ENSMUSP00000124067	TRANSLATION	protein_coding	-	CCDS80970.1	1	347	18	2.75	11.8	252.4	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000045994	B3gat1	ENSMUST00000161115	ENSMUSP00000125700	TRANSLATION	protein_coding	-	CCDS22936.1	1	334	18	2.75	6.4	252.4	2	-1,-5	-	-	19.5	MINOR
ENSMUSG00000045994	B3gat1	ENSMUST00000159527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059473	Olfr979	ENSMUST00000080835	ENSMUSP00000079648	TRANSLATION	protein_coding	-	CCDS23070.1	-	311	0	0.2	8.8	194.5	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059473	Olfr979	ENSMUST00000215523	ENSMUSP00000148903	TRANSLATION	protein_coding	-	CCDS23070.1	5	311	0	0.2	8.8	194.5	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031129	Slc9a9	ENSMUST00000033463	ENSMUSP00000033463	TRANSLATION	protein_coding	-	CCDS40726.1	1	644	0	4.14	7.5	291.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031129	Slc9a9	ENSMUST00000162870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031129	Slc9a9	ENSMUST00000162329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000038863	ENSMUSP00000036710	TRANSLATION	protein_coding	-	CCDS23659.1	1	902	20	14.95	5.1	188.4	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000035202	Lars2	ENSMUST00000215087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000214074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000217116	ENSMUSP00000150083	TRANSLATION	nonsense_mediated_decay	-	-	5	495	6	7.55	0	88.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000035202	Lars2	ENSMUST00000214557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000216843	ENSMUSP00000150895	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000035202	Lars2	ENSMUST00000215674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000213711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035202	Lars2	ENSMUST00000215464	ENSMUSP00000149082	TRANSLATION	protein_coding	start	-	3	121	4	2.75	0	51.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032494	Tdgf1	ENSMUST00000199782	ENSMUSP00000143669	TRANSLATION	protein_coding	stop	-	3	90	4	1.85	0	43.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032494	Tdgf1	ENSMUST00000197460	ENSMUSP00000143394	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0.1	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000032494	Tdgf1	ENSMUST00000035075	ENSMUSP00000035075	TRANSLATION	protein_coding	-	CCDS40783.1	1	171	4	2.18	1.5	58.4	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000032494	Tdgf1	ENSMUST00000199196	ENSMUSP00000142397	TRANSLATION	protein_coding	stop	-	5	60	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000001014	Icam4	ENSMUST00000215077	ENSMUSP00000151013	TRANSLATION	protein_coding	-	-	1	262	0	1.2	0	53.3	0	-2,-3	-	-	11.142	ALTERNATIVE:2
ENSMUSG00000001014	Icam4	ENSMUST00000001040	ENSMUSP00000001040	TRANSLATION	protein_coding	-	CCDS22890.1	1	262	0	1.4	1.5	53.3	0	-2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000031936	Hephl1	ENSMUST00000159985	ENSMUSP00000124518	TRANSLATION	protein_coding	-	CCDS52725.1	5	1159	37	16.97	1.7	167.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000070298	Trcg1	ENSMUST00000093837	ENSMUSP00000091357	TRANSLATION	protein_coding	-	CCDS23218.1	5	825	0	0	0.5	0	0	1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000060461	Dppa5a	ENSMUST00000071991	ENSMUSP00000071881	TRANSLATION	protein_coding	-	CCDS23360.1	1	118	0	1	5.1	104.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000041608	Entpd3	ENSMUST00000143579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041608	Entpd3	ENSMUST00000047687	ENSMUSP00000036830	TRANSLATION	protein_coding	-	CCDS23629.1	1	529	6	6.52	1.5	333.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056961	Olfr919	ENSMUST00000071425	ENSMUSP00000071372	TRANSLATION	protein_coding	-	CCDS23023.1	-	315	0	0	0.5	168	7	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000056961	Olfr919	ENSMUST00000215612	ENSMUSP00000150936	TRANSLATION	protein_coding	-	-	5	311	0	0	4	168	7	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000056961	Olfr919	ENSMUST00000217508	ENSMUSP00000150303	TRANSLATION	protein_coding	-	-	5	311	0	0	4	168	7	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000039632	Ccdc151	ENSMUST00000115336	ENSMUSP00000110993	TRANSLATION	protein_coding	-	CCDS52740.1	1	594	0	0	1.5	0	0	-2,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000039632	Ccdc151	ENSMUST00000044926	ENSMUSP00000041117	TRANSLATION	protein_coding	-	CCDS22917.1	1	593	0	0	1.5	0	0	-2,-4	-	-	0	PRINCIPAL:3
ENSMUSG00000039632	Ccdc151	ENSMUST00000214420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063842	Olfr862	ENSMUST00000079660	ENSMUSP00000078603	TRANSLATION	protein_coding	-	CCDS22866.1	5	306	0	0.4	1.5	176.2	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063842	Olfr862	ENSMUST00000073765	ENSMUSP00000073437	TRANSLATION	protein_coding	-	CCDS22866.1	-	306	0	0.4	1.5	176.2	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043885	Slc36a4	ENSMUST00000061568	ENSMUSP00000057355	TRANSLATION	protein_coding	-	CCDS22840.1	1	500	0	0	0.5	262.9	14	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043885	Slc36a4	ENSMUST00000214954	ENSMUSP00000149875	TRANSLATION	nonsense_mediated_decay	start	-	3	140	0	0	0	102	8	-2,-5	-	-	-1	MINOR
ENSMUSG00000043885	Slc36a4	ENSMUST00000115588	ENSMUSP00000111251	TRANSLATION	protein_coding	-	-	1	404	0	0	0	217.1	11	-4,-5	-	-	3.252	MINOR
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000177022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000177142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000176160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000176894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000177546	ENSMUSP00000134870	TRANSLATION	protein_coding	-	-	3	89	0	0	0	113.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000176238	ENSMUSP00000135679	TRANSLATION	protein_coding	stop	-	3	143	0	0	0.5	136	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000042576	ENSMUSP00000046890	TRANSLATION	protein_coding	-	CCDS80996.1	1	182	0	0	0.5	302.1	0	-4,0	-	-	5.118	MINOR
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000176682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037971	1110032A03Rik	ENSMUST00000042468	ENSMUSP00000041803	TRANSLATION	protein_coding	-	CCDS23173.1	1	166	0	0	0.5	316.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032418	Me1	ENSMUST00000189847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032418	Me1	ENSMUST00000185374	ENSMUSP00000140887	TRANSLATION	protein_coding	-	CCDS81047.1	1	552	30	12.75	0.5	614.1	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000032418	Me1	ENSMUST00000034989	ENSMUSP00000034989	TRANSLATION	protein_coding	-	CCDS23383.1	1	572	30	13.5	6.3	614.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000032418	Me1	ENSMUST00000189968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079427	Mthfsl	ENSMUST00000186721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079427	Mthfsl	ENSMUST00000186863	ENSMUSP00000150907	TRANSLATION	protein_coding	-	-	2	146	8	2	10.3	158.6	0	-4,-5	-	-	15.132	MINOR
ENSMUSG00000079427	Mthfsl	ENSMUST00000113110	ENSMUSP00000108734	TRANSLATION	protein_coding	-	CCDS52881.1	1	203	8	3.5	6.3	206.4	0	-4,0	-	-	19.71	PRINCIPAL:1
ENSMUSG00000079427	Mthfsl	ENSMUST00000190027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079427	Mthfsl	ENSMUST00000185519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079427	Mthfsl	ENSMUST00000186975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079427	Mthfsl	ENSMUST00000191235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032343	Impg1	ENSMUST00000085289	ENSMUSP00000082395	TRANSLATION	protein_coding	-	-	5	721	0	0	0	86.2	0	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000032343	Impg1	ENSMUST00000113250	ENSMUSP00000108876	TRANSLATION	protein_coding	-	CCDS57685.1	1	798	0	0	0.5	86.2	0	-1,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000032343	Impg1	ENSMUST00000185068	ENSMUSP00000139151	TRANSLATION	protein_coding	stop	-	5	215	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032357	Tinag	ENSMUST00000184897	ENSMUSP00000139155	TRANSLATION	nonsense_mediated_decay	-	-	1	169	0	1.35	0	29	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000032357	Tinag	ENSMUST00000034911	ENSMUSP00000034911	TRANSLATION	protein_coding	-	CCDS23351.1	1	475	3	5.93	2.7	199.5	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032386	Trip4	ENSMUST00000117083	ENSMUSP00000113949	TRANSLATION	protein_coding	-	CCDS23298.1	1	581	2	4.43	5.1	68.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032386	Trip4	ENSMUST00000143864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032386	Trip4	ENSMUST00000133747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032386	Trip4	ENSMUST00000122410	ENSMUSP00000112866	TRANSLATION	protein_coding	-	CCDS52838.1	1	539	2	2.6	0.5	65.7	0	-4,-5	-	-	10.064	MINOR
ENSMUSG00000032386	Trip4	ENSMUST00000132380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032386	Trip4	ENSMUST00000179395	ENSMUSP00000137304	TRANSLATION	protein_coding	-	CCDS52838.1	5	539	2	2.6	0.5	65.7	0	-4,-5	-	-	10.064	MINOR
ENSMUSG00000032386	Trip4	ENSMUST00000126517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032386	Trip4	ENSMUST00000139346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032386	Trip4	ENSMUST00000134338	ENSMUSP00000117648	TRANSLATION	protein_coding	stop	-	5	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032386	Trip4	ENSMUST00000119245	ENSMUSP00000112385	TRANSLATION	protein_coding	-	CCDS23298.1	1	581	2	4.43	5.1	68.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000074259	Gramd2	ENSMUST00000143224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074259	Gramd2	ENSMUST00000098661	ENSMUSP00000096258	TRANSLATION	protein_coding	-	CCDS52818.1	1	312	0	1.79	1.5	70.1	1	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000074259	Gramd2	ENSMUST00000123914	ENSMUSP00000114530	TRANSLATION	protein_coding	stop	-	5	245	0	1.79	0	70.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074259	Gramd2	ENSMUST00000128944	ENSMUSP00000116879	TRANSLATION	protein_coding	-	-	1	320	0	1.79	0.5	70.1	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000074259	Gramd2	ENSMUST00000129129	ENSMUSP00000118901	TRANSLATION	protein_coding	start	-	5	200	0	0.75	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000074259	Gramd2	ENSMUST00000133822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051234	Rnf7	ENSMUST00000128955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051234	Rnf7	ENSMUST00000071301	ENSMUSP00000108581	TRANSLATION	protein_coding	-	CCDS81056.1	2	90	2	0.8	8.8	23.1	0	-4,-5	-	-	5.882	MINOR
ENSMUSG00000051234	Rnf7	ENSMUST00000057500	ENSMUSP00000052856	TRANSLATION	protein_coding	-	CCDS40730.1	1	113	12	2.55	15.3	76.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032595	Cdhr4	ENSMUST00000035215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032595	Cdhr4	ENSMUST00000176306	ENSMUSP00000135198	TRANSLATION	nonsense_mediated_decay	start	-	5	42	1	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000175759	ENSMUSP00000135743	TRANSLATION	protein_coding	start	-	5	220	5	1.68	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000176334	ENSMUSP00000135366	TRANSLATION	protein_coding	start	-	3	182	0	1.21	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000177093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032595	Cdhr4	ENSMUST00000177516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032595	Cdhr4	ENSMUST00000176183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032595	Cdhr4	ENSMUST00000177226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032595	Cdhr4	ENSMUST00000175802	ENSMUSP00000135003	TRANSLATION	protein_coding	start	-	3	137	9	1.16	0	53.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000177508	ENSMUSP00000135332	TRANSLATION	protein_coding	start	-	2	155	0	0.6	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000176373	ENSMUSP00000134896	TRANSLATION	protein_coding	-	-	5	93	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000032595	Cdhr4	ENSMUST00000177173	ENSMUSP00000135184	TRANSLATION	protein_coding	-	-	5	783	19	6.614	0.5	53.5	2	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032595	Cdhr4	ENSMUST00000176919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032595	Cdhr4	ENSMUST00000176196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095448	Olfr859	ENSMUST00000086480	ENSMUSP00000083669	TRANSLATION	protein_coding	-	CCDS22864.1	-	309	0	0.36	2.7	181.7	4	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095448	Olfr859	ENSMUST00000212540	ENSMUSP00000148298	TRANSLATION	protein_coding	-	CCDS22864.1	3	309	0	0.36	2.7	181.7	4	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095448	Olfr859	ENSMUST00000217280	ENSMUSP00000151076	TRANSLATION	protein_coding	-	CCDS22864.1	5	309	0	0.36	2.7	181.7	4	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033590	Myo5c	ENSMUST00000215352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033590	Myo5c	ENSMUST00000216529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033590	Myo5c	ENSMUST00000216788	ENSMUSP00000150730	TRANSLATION	nonsense_mediated_decay	-	-	1	269	14	5.33	0	305.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033590	Myo5c	ENSMUST00000215620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033590	Myo5c	ENSMUST00000215437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033590	Myo5c	ENSMUST00000036555	ENSMUSP00000042229	TRANSLATION	protein_coding	-	CCDS40691.1	5	1742	15	28.14	1.5	1091.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033590	Myo5c	ENSMUST00000213424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034910	Pygo1	ENSMUST00000038489	ENSMUSP00000044368	TRANSLATION	protein_coding	-	CCDS23332.1	1	417	8	0.4	6.4	29.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000051118	Olfr77	ENSMUST00000217347	ENSMUSP00000149055	TRANSLATION	protein_coding	-	CCDS22867.1	5	312	0	0.36	2.7	179.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000051118	Olfr77	ENSMUST00000057596	ENSMUSP00000058810	TRANSLATION	protein_coding	-	CCDS22867.1	1	312	0	0.36	2.7	179.5	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041729	Coro2b	ENSMUST00000123379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041729	Coro2b	ENSMUST00000131981	ENSMUSP00000133481	TRANSLATION	protein_coding	start	-	3	181	0	2.95	0	70.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041729	Coro2b	ENSMUST00000151604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041729	Coro2b	ENSMUST00000164246	ENSMUSP00000128441	TRANSLATION	protein_coding	stop	-	5	317	0	6.81	0	155.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041729	Coro2b	ENSMUST00000174439	ENSMUSP00000134079	TRANSLATION	protein_coding	stop	-	5	94	0	1.8	0	35	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041729	Coro2b	ENSMUST00000173171	ENSMUSP00000134709	TRANSLATION	protein_coding	stop	-	5	121	0	2	0	120.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041729	Coro2b	ENSMUST00000048043	ENSMUSP00000041826	TRANSLATION	protein_coding	-	CCDS23264.2	1	480	0	9.01	10.5	225.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000043587	Pxylp1	ENSMUST00000136987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043587	Pxylp1	ENSMUST00000126411	ENSMUSP00000121537	TRANSLATION	protein_coding	stop	-	5	190	4	1.38	0	58.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043587	Pxylp1	ENSMUST00000120101	ENSMUSP00000113210	TRANSLATION	protein_coding	-	CCDS23418.1	1	480	7	1.62	2.7	96.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043587	Pxylp1	ENSMUST00000141127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043587	Pxylp1	ENSMUST00000135834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043587	Pxylp1	ENSMUST00000078478	ENSMUSP00000077571	TRANSLATION	protein_coding	-	CCDS23418.1	1	480	7	1.62	2.7	96.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043587	Pxylp1	ENSMUST00000185561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043587	Pxylp1	ENSMUST00000137770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043587	Pxylp1	ENSMUST00000124923	ENSMUSP00000120377	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000043587	Pxylp1	ENSMUST00000154146	ENSMUSP00000114946	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000043587	Pxylp1	ENSMUST00000119141	ENSMUSP00000113489	TRANSLATION	protein_coding	-	CCDS23418.1	1	480	7	1.62	2.7	96.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043587	Pxylp1	ENSMUST00000121077	ENSMUSP00000113059	TRANSLATION	protein_coding	stop	-	3	180	3	0.38	0	23.9	0	1,-3	-	-	-1	MINOR
ENSMUSG00000043587	Pxylp1	ENSMUST00000112951	ENSMUSP00000108574	TRANSLATION	protein_coding	-	CCDS23418.1	1	480	7	1.62	2.7	96.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000039163	Cmc1	ENSMUST00000215799	ENSMUSP00000150859	TRANSLATION	protein_coding	-	-	1	58	0	0	0	35.8	0	-4,-5	-	-	3.18	MINOR
ENSMUSG00000039163	Cmc1	ENSMUST00000044220	ENSMUSP00000047904	TRANSLATION	protein_coding	-	CCDS40800.1	1	106	0	0	9.5	67.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000032125	Robo4	ENSMUST00000115048	ENSMUSP00000110700	TRANSLATION	protein_coding	-	-	1	901	0	5.4084	0	80.5	2	0,-3	-	-	8.472	MINOR
ENSMUSG00000032125	Robo4	ENSMUST00000214185	ENSMUSP00000150722	TRANSLATION	protein_coding	-	-	1	1012	0	6.0084	0	119.3	2	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032125	Robo4	ENSMUST00000115046	ENSMUSP00000110698	TRANSLATION	protein_coding	-	-	2	1064	0	6.0084	0	119.3	2	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032125	Robo4	ENSMUST00000102895	ENSMUSP00000099959	TRANSLATION	protein_coding	-	-	1	1005	0	6.0084	0	119.3	2	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032125	Robo4	ENSMUST00000239486	ENSMUSP00000159318	TRANSLATION	protein_coding	-	CCDS22977.1	-	1015	0	6.0084	0.5	119.3	2	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000032125	Robo4	ENSMUST00000215777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032125	Robo4	ENSMUST00000156972	ENSMUSP00000150053	TRANSLATION	nonsense_mediated_decay	-	-	2	308	0	3.37	0	93.1	0	1,-2	-	-	-1	MINOR
ENSMUSG00000050445	Cyp8b1	ENSMUST00000062474	ENSMUSP00000052989	TRANSLATION	protein_coding	-	CCDS23641.1	-	500	25	0.64	3.9	162.4	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000032179	Bmp5	ENSMUST00000137213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032179	Bmp5	ENSMUST00000012281	ENSMUSP00000012281	TRANSLATION	protein_coding	-	CCDS23348.1	1	454	0	3.51	7.6	435	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000039438	Ttc36	ENSMUST00000216449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039438	Ttc36	ENSMUST00000044694	ENSMUSP00000042183	TRANSLATION	protein_coding	-	CCDS23121.1	1	186	0	1.28	5.1	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032491	Nradd	ENSMUST00000196876	ENSMUSP00000142925	TRANSLATION	protein_coding	stop	-	3	59	0	0.5	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032491	Nradd	ENSMUST00000197894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032491	Nradd	ENSMUST00000196735	ENSMUSP00000143785	TRANSLATION	protein_coding	stop	-	1	200	0	2.3	0	33.4	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032491	Nradd	ENSMUST00000035069	ENSMUSP00000035069	TRANSLATION	protein_coding	-	CCDS23569.1	1	228	0	3.05	1.5	52.3	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032369	Plscr1	ENSMUST00000187952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032369	Plscr1	ENSMUST00000093801	ENSMUSP00000091318	TRANSLATION	protein_coding	-	CCDS52886.1	1	328	0	0	0.5	324	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032369	Plscr1	ENSMUST00000186364	ENSMUSP00000139479	TRANSLATION	protein_coding	-	CCDS52886.1	1	328	0	0	0.5	324	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032030	Cul5	ENSMUST00000137922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032030	Cul5	ENSMUST00000123499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032030	Cul5	ENSMUST00000166367	ENSMUSP00000133144	TRANSLATION	protein_coding	-	CCDS52798.1	5	828	0	17.58	1.5	502.5	0	-4,-2	-	-	4.5	MINOR
ENSMUSG00000032030	Cul5	ENSMUST00000120122	ENSMUSP00000113490	TRANSLATION	protein_coding	-	-	5	651	0	14.83	0.5	627.5	0	-4,-5	-	-	2.022	MINOR
ENSMUSG00000032030	Cul5	ENSMUST00000146405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032030	Cul5	ENSMUST00000141803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032030	Cul5	ENSMUST00000141180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032030	Cul5	ENSMUST00000034529	ENSMUSP00000034529	TRANSLATION	protein_coding	-	CCDS40638.2	1	855	0	18.33	0.5	693.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000032030	Cul5	ENSMUST00000133872	ENSMUSP00000121734	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043613	Mmp3	ENSMUST00000034497	ENSMUSP00000034497	TRANSLATION	protein_coding	-	CCDS22806.1	1	479	28	9.16	2.7	408.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025888	Casp1	ENSMUST00000027015	ENSMUSP00000027015	TRANSLATION	protein_coding	-	CCDS22798.1	1	402	4	10.8	1.5	260.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000025888	Casp1	ENSMUST00000238505	ENSMUSP00000158737	TRANSLATION	protein_coding	stop	-	-	156	0	3.3	0	39.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025888	Casp1	ENSMUST00000238546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025888	Casp1	ENSMUST00000238348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025888	Casp1	ENSMUST00000238730	ENSMUSP00000158725	TRANSLATION	nonsense_mediated_decay	start	-	-	103	0	2.25	0	35.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010044	Zmynd10	ENSMUST00000195627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010044	Zmynd10	ENSMUST00000195158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010044	Zmynd10	ENSMUST00000192445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010044	Zmynd10	ENSMUST00000010188	ENSMUSP00000010188	TRANSLATION	protein_coding	-	CCDS23493.1	1	440	9	1.75	6.3	33.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000010044	Zmynd10	ENSMUST00000193303	ENSMUSP00000141420	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034739	Mfrp	ENSMUST00000034654	ENSMUSP00000034654	TRANSLATION	protein_coding	-	CCDS40597.1	1	584	15	7.4572	1.5	294.8	2	-4,-5	-	-	17.496	PRINCIPAL:3
ENSMUSG00000034739	Mfrp	ENSMUST00000206722	ENSMUSP00000146138	TRANSLATION	protein_coding	start/stop	-	5	187	4	2.8352	0	74.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034739	Mfrp	ENSMUST00000161703	ENSMUSP00000125053	TRANSLATION	nonsense_mediated_decay	-	-	5	324	9	3.1828	0	118.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000034739	Mfrp	ENSMUST00000161381	ENSMUSP00000124456	TRANSLATION	protein_coding	-	CCDS52776.1	1	578	15	7.444	0.5	294.8	2	-4,-5	-	-	17.472	ALTERNATIVE:2
ENSMUSG00000034739	Mfrp	ENSMUST00000206308	ENSMUSP00000145676	TRANSLATION	protein_coding	-	-	5	584	15	7.708	1.5	294.8	2	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000034739	Mfrp	ENSMUST00000205282	ENSMUSP00000145633	TRANSLATION	nonsense_mediated_decay	-	-	5	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094995	Pate3	ENSMUST00000178236	ENSMUSP00000136668	TRANSLATION	protein_coding	-	CCDS52755.1	1	98	0	0	2.7	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000057367	Birc2	ENSMUST00000054878	ENSMUSP00000062610	TRANSLATION	protein_coding	start	-	-	125	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057367	Birc2	ENSMUST00000189935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057367	Birc2	ENSMUST00000190341	ENSMUSP00000140049	TRANSLATION	protein_coding	-	CCDS22811.1	5	612	12	5.15	0.5	348.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000057367	Birc2	ENSMUST00000191248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057367	Birc2	ENSMUST00000074246	ENSMUSP00000091422	TRANSLATION	protein_coding	-	CCDS22811.1	1	612	12	5.15	0.5	348.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035941	Ibtk	ENSMUST00000185353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035941	Ibtk	ENSMUST00000186447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035941	Ibtk	ENSMUST00000186322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035941	Ibtk	ENSMUST00000039213	ENSMUSP00000041145	TRANSLATION	protein_coding	-	CCDS40712.1	1	1352	0	8.5	2.7	271.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035941	Ibtk	ENSMUST00000187521	ENSMUSP00000139424	TRANSLATION	nonsense_mediated_decay	-	-	1	495	0	5.1	0	158.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035941	Ibtk	ENSMUST00000188768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013076	Amotl1	ENSMUST00000013220	ENSMUSP00000013220	TRANSLATION	protein_coding	-	CCDS40535.1	1	968	0	0	0.5	306.4	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000013076	Amotl1	ENSMUST00000223132	ENSMUSP00000152834	TRANSLATION	protein_coding	-	-	5	1005	0	0	0.5	306.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000013076	Amotl1	ENSMUST00000160770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013076	Amotl1	ENSMUST00000161171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013076	Amotl1	ENSMUST00000162802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013076	Amotl1	ENSMUST00000162901	ENSMUSP00000152243	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032356	Rasgrf1	ENSMUST00000034909	ENSMUSP00000034909	TRANSLATION	protein_coding	-	CCDS40723.1	1	178	11	0.6	1.5	32.2	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032356	Rasgrf1	ENSMUST00000034912	ENSMUSP00000034912	TRANSLATION	protein_coding	-	CCDS40722.1	1	1262	10	12.435	0.5	448	0	-4,-6	-	-	17.334	PRINCIPAL:1
ENSMUSG00000032356	Rasgrf1	ENSMUST00000189545	ENSMUSP00000140921	TRANSLATION	protein_coding	-	-	1	153	11	0.6	0	32.2	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032356	Rasgrf1	ENSMUST00000190073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032431	Crtap	ENSMUST00000151377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032431	Crtap	ENSMUST00000084881	ENSMUSP00000081941	TRANSLATION	protein_coding	-	CCDS23592.1	1	400	0	0	0.5	0	0	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000043013	Onecut1	ENSMUST00000056006	ENSMUSP00000058020	TRANSLATION	protein_coding	-	CCDS23339.1	1	465	0	1.6	7.5	146.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043013	Onecut1	ENSMUST00000160499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032057	4833427G06Rik	ENSMUST00000170947	ENSMUSP00000126725	TRANSLATION	protein_coding	-	CCDS40628.1	1	168	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000051160	Olfr853	ENSMUST00000213834	ENSMUSP00000150773	TRANSLATION	protein_coding	-	CCDS22860.1	5	305	0	0.42	3.9	193.8	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000051160	Olfr853	ENSMUST00000058296	ENSMUSP00000053262	TRANSLATION	protein_coding	-	CCDS22860.1	-	305	0	0.42	3.9	193.8	4	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000032118	Fez1	ENSMUST00000162633	ENSMUSP00000124634	TRANSLATION	protein_coding	stop	-	5	123	0	0	0	87.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032118	Fez1	ENSMUST00000214772	ENSMUSP00000149910	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032118	Fez1	ENSMUST00000161500	ENSMUSP00000123762	TRANSLATION	protein_coding	stop	-	5	167	0	0	0	115.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032118	Fez1	ENSMUST00000216539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032118	Fez1	ENSMUST00000163816	ENSMUSP00000126072	TRANSLATION	protein_coding	-	CCDS40581.1	1	392	0	0	12	278	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032118	Fez1	ENSMUST00000160041	ENSMUSP00000124648	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032118	Fez1	ENSMUST00000159137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032118	Fez1	ENSMUST00000034630	ENSMUSP00000034630	TRANSLATION	protein_coding	-	CCDS40581.1	1	392	0	0	12	278	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032118	Fez1	ENSMUST00000161978	ENSMUSP00000125475	TRANSLATION	protein_coding	start	-	1	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032118	Fez1	ENSMUST00000162235	ENSMUSP00000124185	TRANSLATION	protein_coding	start	-	5	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034485	Uaca	ENSMUST00000216574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034485	Uaca	ENSMUST00000214354	ENSMUSP00000151172	TRANSLATION	protein_coding	-	-	5	1411	0	5.3	1.5	42.5	0	-4,-7	-	-	9.072	ALTERNATIVE:2
ENSMUSG00000034485	Uaca	ENSMUST00000050183	ENSMUSP00000062047	TRANSLATION	protein_coding	-	CCDS23259.1	1	1413	0	5.3	1.5	53.4	0	-4,-7	-	-	9.858	PRINCIPAL:2
ENSMUSG00000034485	Uaca	ENSMUST00000214997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034485	Uaca	ENSMUST00000217656	ENSMUSP00000150547	TRANSLATION	protein_coding	start	-	1	1236	0	5.3	0	83	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000092192	Dnaaf4	ENSMUST00000034734	ENSMUSP00000034734	TRANSLATION	protein_coding	-	CCDS23333.1	1	420	0	2.4	1.5	25.5	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000092192	Dnaaf4	ENSMUST00000098567	ENSMUSP00000096166	TRANSLATION	protein_coding	-	CCDS52854.1	5	300	0	2.4	0.5	25.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039977	Deup1	ENSMUST00000115593	ENSMUSP00000111256	TRANSLATION	protein_coding	-	CCDS22839.2	5	507	0	0	0.5	299.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000039977	Deup1	ENSMUST00000152377	ENSMUSP00000121526	TRANSLATION	protein_coding	stop	-	1	397	0	0	0	299.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039977	Deup1	ENSMUST00000115592	ENSMUSP00000111255	TRANSLATION	protein_coding	-	CCDS22839.2	1	507	0	0	0.5	299.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000039977	Deup1	ENSMUST00000137164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039977	Deup1	ENSMUST00000045513	ENSMUSP00000039912	TRANSLATION	protein_coding	-	-	5	601	0	0	5.1	299.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040204	Pclaf	ENSMUST00000130308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040204	Pclaf	ENSMUST00000045802	ENSMUSP00000038877	TRANSLATION	protein_coding	-	CCDS23299.1	1	110	0	0	6.3	117	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000040204	Pclaf	ENSMUST00000153841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036611	Eepd1	ENSMUST00000040677	ENSMUSP00000047083	TRANSLATION	protein_coding	-	CCDS22935.1	1	569	0	0	7.5	139	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000036611	Eepd1	ENSMUST00000156237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058192	Zfp846	ENSMUST00000217655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058192	Zfp846	ENSMUST00000214194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058192	Zfp846	ENSMUST00000115557	ENSMUSP00000111219	TRANSLATION	protein_coding	-	CCDS22878.2	1	541	55	1.6	0.5	364.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058192	Zfp846	ENSMUST00000140668	ENSMUSP00000115945	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	1	0	86.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058192	Zfp846	ENSMUST00000060063	ENSMUSP00000051593	TRANSLATION	protein_coding	-	CCDS22878.2	5	541	55	1.6	0.5	364.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033538	Casp4	ENSMUST00000163086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033538	Casp4	ENSMUST00000162846	ENSMUSP00000124402	TRANSLATION	protein_coding	stop	-	5	93	0	1.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033538	Casp4	ENSMUST00000027012	ENSMUSP00000027012	TRANSLATION	protein_coding	-	CCDS22799.1	1	373	5	6.5	0.5	205.1	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000033538	Casp4	ENSMUST00000152651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033538	Casp4	ENSMUST00000159461	ENSMUSP00000124535	TRANSLATION	nonsense_mediated_decay	start	-	2	69	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033538	Casp4	ENSMUST00000160521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033538	Casp4	ENSMUST00000160064	ENSMUSP00000124249	TRANSLATION	nonsense_mediated_decay	-	-	2	118	0	0.15	0	50.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048501	Olfr938	ENSMUST00000056499	ENSMUSP00000055053	TRANSLATION	protein_coding	-	CCDS23038.1	-	315	0	0.24	2.7	165	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049028	Olfr873	ENSMUST00000075717	ENSMUSP00000075135	TRANSLATION	protein_coding	-	-	2	323	0	0.36	0.5	177	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000049028	Olfr873	ENSMUST00000215540	ENSMUSP00000153816	TRANSLATION	protein_coding	-	-	5	322	0	0.36	0	177	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000049028	Olfr873	ENSMUST00000217193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049028	Olfr873	ENSMUST00000216567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049028	Olfr873	ENSMUST00000212793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049028	Olfr873	ENSMUST00000053919	ENSMUSP00000054778	TRANSLATION	protein_coding	-	CCDS22876.1	-	319	0	0.36	0.5	177	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000049028	Olfr873	ENSMUST00000213445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091129	Iqcf6	ENSMUST00000171091	ENSMUSP00000131823	TRANSLATION	protein_coding	-	CCDS52913.1	5	157	0	0	1.5	48.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000091129	Iqcf6	ENSMUST00000238329	ENSMUSP00000158588	TRANSLATION	protein_coding	-	-	-	146	0	0	1.2	48.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000035878	Hykk	ENSMUST00000039742	ENSMUSP00000039980	TRANSLATION	protein_coding	-	CCDS23197.1	1	376	4	0	3.9	123.3	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000035878	Hykk	ENSMUST00000124295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035878	Hykk	ENSMUST00000135648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035878	Hykk	ENSMUST00000125983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035443	Thyn1	ENSMUST00000217143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035443	Thyn1	ENSMUST00000213770	ENSMUSP00000151200	TRANSLATION	protein_coding	-	-	1	167	0	4.25	0.5	127.1	0	-4,-5	-	-	5.682	MINOR
ENSMUSG00000035443	Thyn1	ENSMUST00000214458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035443	Thyn1	ENSMUST00000215024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035443	Thyn1	ENSMUST00000216361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035443	Thyn1	ENSMUST00000039161	ENSMUSP00000037614	TRANSLATION	protein_coding	-	CCDS22937.1	1	226	0	5.91	1.5	177.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035443	Thyn1	ENSMUST00000213683	ENSMUSP00000150823	TRANSLATION	protein_coding	-	CCDS22937.1	5	226	0	5.91	1.5	177.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035443	Thyn1	ENSMUST00000214910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053716	Dusp7	ENSMUST00000193878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053716	Dusp7	ENSMUST00000172306	ENSMUSP00000126984	TRANSLATION	protein_coding	-	CCDS23475.2	1	422	9	3.3	4.1	184.3	0	-2,1	-	-	19	PRINCIPAL:1
ENSMUSG00000053716	Dusp7	ENSMUST00000173748	ENSMUSP00000133511	TRANSLATION	protein_coding	start/stop	-	3	220	9	2.04	0	129.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053716	Dusp7	ENSMUST00000173051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092310	Gm20509	ENSMUST00000174203	ENSMUSP00000134473	TRANSLATION	protein_coding,RT	stop	-	5	325	0	2.6	0	163	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000118653	AC159819.1	ENSMUST00000239472	ENSMUSP00000159342	TRANSLATION	protein_coding	-	-	-	223	0	1	6.3	138.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000007815	Rhoa	ENSMUST00000193619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007815	Rhoa	ENSMUST00000194701	ENSMUSP00000141967	TRANSLATION	protein_coding	stop	-	2	165	25	4	0	183.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007815	Rhoa	ENSMUST00000193490	ENSMUSP00000141572	TRANSLATION	protein_coding	stop	-	2	67	15	1.5	0	87.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007815	Rhoa	ENSMUST00000193424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007815	Rhoa	ENSMUST00000007959	ENSMUSP00000007959	TRANSLATION	protein_coding	-	CCDS23521.1	1	193	25	4.75	21.5	197.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036057	Ptpn23	ENSMUST00000200531	ENSMUSP00000142930	TRANSLATION	protein_coding	start/stop	-	3	249	8	1.4	0	41.1	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000036057	Ptpn23	ENSMUST00000199254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036057	Ptpn23	ENSMUST00000040021	ENSMUSP00000039580	TRANSLATION	protein_coding	-	CCDS40780.1	5	1692	11	18.95	0.5	629.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036057	Ptpn23	ENSMUST00000200278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032397	Tipin	ENSMUST00000213289	ENSMUSP00000150350	TRANSLATION	protein_coding	stop	-	2	93	0	0	0	31.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032397	Tipin	ENSMUST00000215031	ENSMUSP00000150909	TRANSLATION	protein_coding	stop	-	2	93	0	0	0	31.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032397	Tipin	ENSMUST00000034964	ENSMUSP00000034964	TRANSLATION	protein_coding	-	CCDS23279.1	1	278	0	0	1.5	114.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032397	Tipin	ENSMUST00000213165	ENSMUSP00000150808	TRANSLATION	protein_coding	stop	-	2	111	0	0	0	62.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032397	Tipin	ENSMUST00000216594	ENSMUSP00000149833	TRANSLATION	protein_coding	-	CCDS23279.1	1	278	0	0	1.5	114.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000066747	Olfr878	ENSMUST00000086061	ENSMUSP00000083228	TRANSLATION	protein_coding	-	CCDS22991.1	-	314	0	0.16	2.7	157.7	5	-4,-7	-	-	12.654	MINOR
ENSMUSG00000066747	Olfr878	ENSMUST00000216723	ENSMUSP00000149519	TRANSLATION	nonsense_mediated_decay	-	-	5	309	0	0.16	8.8	157.7	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000066747	Olfr878	ENSMUST00000214813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066747	Olfr878	ENSMUST00000212878	ENSMUSP00000148312	TRANSLATION	protein_coding	-	-	-	309	0	0.16	8.8	157.7	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066747	Olfr878	ENSMUST00000214263	ENSMUSP00000149530	TRANSLATION	protein_coding	-	-	5	309	0	0.16	8.8	157.7	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037674	Rfx7	ENSMUST00000184015	ENSMUSP00000138957	TRANSLATION	protein_coding	-	-	5	291	0	2.93	0	107.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000037674	Rfx7	ENSMUST00000163401	ENSMUSP00000127192	TRANSLATION	protein_coding	-	CCDS40686.1	2	1459	0	2.93	6.3	107.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037674	Rfx7	ENSMUST00000093820	ENSMUSP00000091338	TRANSLATION	protein_coding	-	-	5	1459	0	2.93	6.3	107.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037674	Rfx7	ENSMUST00000183372	ENSMUSP00000139195	TRANSLATION	protein_coding	-	-	1	291	0	2.93	0	107.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000037674	Rfx7	ENSMUST00000184851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037674	Rfx7	ENSMUST00000183601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037674	Rfx7	ENSMUST00000185177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000177494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000176478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000177096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000176842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032596	Uba7	ENSMUST00000176673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000177071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000176037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032596	Uba7	ENSMUST00000177392	ENSMUSP00000134910	TRANSLATION	nonsense_mediated_decay	-	-	1	410	0	8.93	0	265.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032596	Uba7	ENSMUST00000175933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000035216	ENSMUSP00000035216	TRANSLATION	protein_coding	-	CCDS40764.1	1	977	18	18.8	0.5	718.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032596	Uba7	ENSMUST00000075082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000176743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000176858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032596	Uba7	ENSMUST00000177039	ENSMUSP00000135584	TRANSLATION	nonsense_mediated_decay	start	-	5	102	0	2.1	0	33.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032596	Uba7	ENSMUST00000176340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000168	Dlat	ENSMUST00000142275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000168	Dlat	ENSMUST00000155417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000168	Dlat	ENSMUST00000132455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000168	Dlat	ENSMUST00000125919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000168	Dlat	ENSMUST00000126933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000168	Dlat	ENSMUST00000034567	ENSMUSP00000034567	TRANSLATION	protein_coding	-	CCDS23168.1	1	642	4	12.15	0.5	434.7	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000054836	Elp6	ENSMUST00000198247	ENSMUSP00000143595	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	0	0	179.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054836	Elp6	ENSMUST00000199592	ENSMUSP00000142823	TRANSLATION	protein_coding	-	CCDS52937.1	1	266	0	0	3.9	378.7	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000054836	Elp6	ENSMUST00000068071	ENSMUSP00000069017	TRANSLATION	protein_coding	-	-	1	263	0	0	0	355.2	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000054836	Elp6	ENSMUST00000196855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054836	Elp6	ENSMUST00000199114	ENSMUSP00000143622	TRANSLATION	protein_coding	stop	-	2	166	0	0	0	205.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057895	Zfp105	ENSMUST00000148851	ENSMUSP00000123112	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057895	Zfp105	ENSMUST00000051667	ENSMUSP00000079840	TRANSLATION	protein_coding	-	CCDS23649.1	1	524	44	0.6	1.5	279.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058491	Olfr869	ENSMUST00000213024	ENSMUSP00000154723	TRANSLATION	protein_coding	-	CCDS22871.2	2	323	0	0.28	0.5	143.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062794	Zfp599	ENSMUST00000086281	ENSMUSP00000083462	TRANSLATION	protein_coding	-	CCDS40561.1	1	548	43	1.6	0.5	269.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032561	Acpp	ENSMUST00000131084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032561	Acpp	ENSMUST00000128635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032561	Acpp	ENSMUST00000215852	ENSMUSP00000150874	TRANSLATION	protein_coding	stop	-	5	155	4	3.6	0	29.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000032561	Acpp	ENSMUST00000112590	ENSMUSP00000108209	TRANSLATION	protein_coding	-	CCDS40750.1	1	381	6	9.1	1.5	114.1	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000032561	Acpp	ENSMUST00000062723	ENSMUSP00000059889	TRANSLATION	protein_coding	-	CCDS23460.1	1	417	6	9.1	2.7	114.1	0	3,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000032561	Acpp	ENSMUST00000125800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019659	Ccdc12	ENSMUST00000196542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019659	Ccdc12	ENSMUST00000195979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019659	Ccdc12	ENSMUST00000198077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019659	Ccdc12	ENSMUST00000199611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019659	Ccdc12	ENSMUST00000200550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019659	Ccdc12	ENSMUST00000019803	ENSMUSP00000019803	TRANSLATION	protein_coding	-	CCDS23570.1	1	166	0	0	5.1	132.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000019659	Ccdc12	ENSMUST00000200296	ENSMUSP00000143208	TRANSLATION	protein_coding	start	-	2	88	0	0	0	81.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019659	Ccdc12	ENSMUST00000196347	ENSMUSP00000142985	TRANSLATION	protein_coding	stop	-	5	142	0	0	0	125.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019659	Ccdc12	ENSMUST00000196092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019659	Ccdc12	ENSMUST00000199687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007908	Hmgcll1	ENSMUST00000183979	ENSMUSP00000138914	TRANSLATION	protein_coding	-	-	5	240	4	4.75	1.2	146.7	0	-4,-6	-	-	6.049	MINOR
ENSMUSG00000007908	Hmgcll1	ENSMUST00000126321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007908	Hmgcll1	ENSMUST00000117981	ENSMUSP00000114045	TRANSLATION	protein_coding	-	-	5	311	4	6.5	2.4	196.4	0	-4,-6	-	-	13.087	MINOR
ENSMUSG00000007908	Hmgcll1	ENSMUST00000183505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007908	Hmgcll1	ENSMUST00000121592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007908	Hmgcll1	ENSMUST00000183425	ENSMUSP00000139094	TRANSLATION	protein_coding	-	-	5	177	2	3.75	0	67.8	0	-4,-6	-	-	2	MINOR
ENSMUSG00000007908	Hmgcll1	ENSMUST00000008052	ENSMUSP00000008052	TRANSLATION	protein_coding	-	CCDS23349.1	1	343	4	7.5	7.5	222.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000034908	Sidt2	ENSMUST00000160618	ENSMUSP00000125037	TRANSLATION	nonsense_mediated_decay	start	-	2	79	0	0	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000162529	ENSMUSP00000125060	TRANSLATION	protein_coding	start/stop	-	5	222	0	0	0	129.2	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000160138	ENSMUSP00000124945	TRANSLATION	protein_coding	start/stop	-	3	176	0	0	0	56.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000161606	ENSMUSP00000125660	TRANSLATION	protein_coding	start/stop	-	5	221	0	0	0	91.5	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000162379	ENSMUSP00000124503	TRANSLATION	nonsense_mediated_decay	start	-	3	139	0	0	0	142	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000162072	ENSMUSP00000124750	TRANSLATION	protein_coding	stop	-	5	493	0	0	0	225.8	5	2,-2	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000114573	ENSMUSP00000110220	TRANSLATION	protein_coding	-	CCDS72225.1	1	853	0	0	1.7	943.5	17	2,-2	-	-	5.976	ALTERNATIVE:2
ENSMUSG00000034908	Sidt2	ENSMUST00000160927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034908	Sidt2	ENSMUST00000038488	ENSMUSP00000044290	TRANSLATION	protein_coding	-	CCDS23138.1	1	832	0	0	2.9	943.9	17	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000034908	Sidt2	ENSMUST00000159033	ENSMUSP00000125273	TRANSLATION	protein_coding	start/stop	-	1	74	0	0	0	72.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000160911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034908	Sidt2	ENSMUST00000161042	ENSMUSP00000124577	TRANSLATION	protein_coding	start/stop	-	5	106	0	0	0	0	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000034908	Sidt2	ENSMUST00000160670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034908	Sidt2	ENSMUST00000160598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050641	BC048562	ENSMUST00000057265	ENSMUSP00000059069	TRANSLATION	protein_coding	-	CCDS23525.1	1	204	0	0	5.1	69.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000050641	BC048562	ENSMUST00000192955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023192	Grm2	ENSMUST00000201955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023192	Grm2	ENSMUST00000023959	ENSMUSP00000023959	TRANSLATION	protein_coding	-	CCDS52914.1	5	872	23	5.24	1.5	595.7	10	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000023192	Grm2	ENSMUST00000201681	ENSMUSP00000144631	TRANSLATION	protein_coding	-	-	1	594	23	4.44	0	392.7	4	4,-1	-	-	10.398	MINOR
ENSMUSG00000023192	Grm2	ENSMUST00000200826	ENSMUSP00000144076	TRANSLATION	protein_coding	start	-	1	381	0	2.24	0	275.9	10	-4,-5	-	-	-1	MINOR
ENSMUSG00000092541	Gm20537	ENSMUST00000173131	ENSMUSP00000134122	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	97	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000092541	Gm20537	ENSMUST00000154586	ENSMUSP00000133964	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	59	0	0	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000050397	Foxl2	ENSMUST00000051312	ENSMUSP00000053297	TRANSLATION	protein_coding	-	CCDS23430.1	-	375	0	0.4	1.5	128.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032330	Cox7a2	ENSMUST00000215452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032330	Cox7a2	ENSMUST00000215933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032330	Cox7a2	ENSMUST00000034881	ENSMUSP00000034881	TRANSLATION	protein_coding	-	CCDS23366.1	1	83	0	2.382	14.6	45.3	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000040433	Zbtb38	ENSMUST00000130078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040433	Zbtb38	ENSMUST00000152594	ENSMUSP00000121753	TRANSLATION	protein_coding	-	CCDS40731.1	2	1197	38	1.6	0.5	147.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040433	Zbtb38	ENSMUST00000126066	ENSMUSP00000114300	TRANSLATION	non_stop_decay	stop	-	1	924	18	1	0	92.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040433	Zbtb38	ENSMUST00000128269	ENSMUSP00000121871	TRANSLATION	protein_coding	stop	-	3	184	0	0.6	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040433	Zbtb38	ENSMUST00000093798	ENSMUSP00000091315	TRANSLATION	protein_coding	-	CCDS40731.1	2	1197	38	1.6	0.5	147.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040433	Zbtb38	ENSMUST00000147314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040433	Zbtb38	ENSMUST00000124186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040433	Zbtb38	ENSMUST00000143906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040433	Zbtb38	ENSMUST00000132060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040433	Zbtb38	ENSMUST00000140121	ENSMUSP00000120040	TRANSLATION	protein_coding	stop	-	1	544	18	1	0	92.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040433	Zbtb38	ENSMUST00000137858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040433	Zbtb38	ENSMUST00000143403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032112	Trappc4	ENSMUST00000217224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032112	Trappc4	ENSMUST00000215072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032112	Trappc4	ENSMUST00000217163	ENSMUSP00000150263	TRANSLATION	protein_coding	-	-	1	194	0	4.66	0	181	0	-4,-5	-	-	9.18	MINOR
ENSMUSG00000032112	Trappc4	ENSMUST00000213747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032112	Trappc4	ENSMUST00000217084	ENSMUSP00000149324	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032112	Trappc4	ENSMUST00000215731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032112	Trappc4	ENSMUST00000034623	ENSMUSP00000034623	TRANSLATION	protein_coding	-	CCDS23109.1	1	219	0	5.41	19.5	203	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042496	Prdm10	ENSMUST00000215847	ENSMUSP00000149699	TRANSLATION	protein_coding	-	-	5	1172	37	5.35	0	257.9	0	-4,-5	-	-	16.194	MINOR
ENSMUSG00000042496	Prdm10	ENSMUST00000215499	ENSMUSP00000149526	TRANSLATION	protein_coding	-	-	5	1115	38	5.35	0	273.9	0	-4,-5	-	-	17.82	PRINCIPAL:1
ENSMUSG00000042496	Prdm10	ENSMUST00000117389	ENSMUSP00000112588	TRANSLATION	protein_coding	-	-	1	341	4	2	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042496	Prdm10	ENSMUST00000074510	ENSMUSP00000074104	TRANSLATION	protein_coding	-	CCDS40570.1	5	1135	37	5.44	0.5	257.9	0	-1,-5	-	-	16.374	MINOR
ENSMUSG00000042496	Prdm10	ENSMUST00000136144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004936	Map2k1	ENSMUST00000005066	ENSMUSP00000005066	TRANSLATION	protein_coding	-	CCDS23277.1	1	393	22	9	15.5	209.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000004936	Map2k1	ENSMUST00000152535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004936	Map2k1	ENSMUST00000152675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004936	Map2k1	ENSMUST00000147796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079592	C1qtnf5	ENSMUST00000206295	ENSMUSP00000146051	TRANSLATION	protein_coding	stop	-	5	50	0	0.6	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000079592	C1qtnf5	ENSMUST00000152956	ENSMUSP00000123040	TRANSLATION	protein_coding	stop	-	2	137	0	2.85	0	33.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000079592	C1qtnf5	ENSMUST00000114816	ENSMUSP00000110464	TRANSLATION	protein_coding	-	CCDS52777.1	1	243	0	4.85	8.4	159.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000079592	C1qtnf5	ENSMUST00000114815	ENSMUSP00000110463	TRANSLATION	protein_coding	-	CCDS52777.1	1	243	0	4.85	8.4	159.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000079592	C1qtnf5	ENSMUST00000206769	ENSMUSP00000145714	TRANSLATION	protein_coding	stop	-	5	142	0	2.5	0	123.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079592	C1qtnf5	ENSMUST00000205500	ENSMUSP00000145546	TRANSLATION	protein_coding	stop	-	2	154	0	3.35	0	93.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000079592	C1qtnf5	ENSMUST00000114818	ENSMUSP00000110466	TRANSLATION	protein_coding	-	CCDS52777.1	5	243	0	4.85	8.4	159.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000079592	C1qtnf5	ENSMUST00000114821	ENSMUSP00000110469	TRANSLATION	protein_coding	-	CCDS52777.1	2	243	0	4.85	8.4	159.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000009927	Rps25	ENSMUST00000216076	ENSMUSP00000148977	TRANSLATION	protein_coding	-	-	3	93	0	2	0	145.9	0	-4,-5	-	-	8.73	MINOR
ENSMUSG00000009927	Rps25	ENSMUST00000213116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009927	Rps25	ENSMUST00000215610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009927	Rps25	ENSMUST00000080300	ENSMUSP00000079180	TRANSLATION	protein_coding	-	CCDS40600.1	1	125	0	3	18.2	167.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009927	Rps25	ENSMUST00000217231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009927	Rps25	ENSMUST00000216867	ENSMUSP00000149401	TRANSLATION	protein_coding	-	CCDS40600.1	1	125	0	3	18.2	167.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009927	Rps25	ENSMUST00000217620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025887	Casp12	ENSMUST00000151788	ENSMUSP00000121565	TRANSLATION	nonsense_mediated_decay	-	-	1	231	0	1.6	0	71.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025887	Casp12	ENSMUST00000149520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025887	Casp12	ENSMUST00000138308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025887	Casp12	ENSMUST00000027009	ENSMUSP00000027009	TRANSLATION	protein_coding	-	CCDS22800.1	1	419	5	5.53	1.5	206.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000025887	Casp12	ENSMUST00000151332	ENSMUSP00000122201	TRANSLATION	protein_coding	-	-	1	349	5	5.53	0.5	158	0	-4,-5	-	-	14.078	MINOR
ENSMUSG00000001366	Fbxo9	ENSMUST00000001402	ENSMUSP00000001402	TRANSLATION	protein_coding	-	CCDS52864.1	1	437	0	0	8.3	37.5	0	-4,-5	-	-	8.547	PRINCIPAL:4
ENSMUSG00000001366	Fbxo9	ENSMUST00000159453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001366	Fbxo9	ENSMUST00000159099	ENSMUSP00000125381	TRANSLATION	protein_coding	-	-	1	194	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000001366	Fbxo9	ENSMUST00000085311	ENSMUSP00000082419	TRANSLATION	protein_coding	-	CCDS52863.1	1	436	0	0	9.6	37.5	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000001366	Fbxo9	ENSMUST00000162451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001366	Fbxo9	ENSMUST00000162625	ENSMUSP00000123807	TRANSLATION	protein_coding	stop	-	5	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001366	Fbxo9	ENSMUST00000162310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031934	Panx1	ENSMUST00000166933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031934	Panx1	ENSMUST00000056755	ENSMUSP00000053557	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0.5	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000031934	Panx1	ENSMUST00000164273	ENSMUSP00000126405	TRANSLATION	protein_coding	-	CCDS22832.1	1	426	0	1.1	1.5	50.4	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031934	Panx1	ENSMUST00000169288	ENSMUSP00000132764	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000051386	ENSMUSP00000061731	TRANSLATION	protein_coding	-	CCDS52962.1	1	859	0	16.725	1.5	250.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038775	Vill	ENSMUST00000131647	ENSMUSP00000118375	TRANSLATION	protein_coding	stop	-	3	85	0	1.68	0	21.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000074734	ENSMUSP00000074294	TRANSLATION	protein_coding	-	CCDS23606.1	1	775	0	15.725	0.5	218.5	0	-4,-5	-	-	8.07	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000153454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038775	Vill	ENSMUST00000126251	ENSMUSP00000116262	TRANSLATION	protein_coding	-	-	1	392	0	7.395	0	86	0	-4,-6	-	-	0	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000135872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038775	Vill	ENSMUST00000141185	ENSMUSP00000116546	TRANSLATION	protein_coding	-	-	1	475	0	8.725	0	119.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000136561	ENSMUSP00000123393	TRANSLATION	protein_coding	stop	-	2	140	0	3	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038775	Vill	ENSMUST00000151638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038775	Vill	ENSMUST00000153630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033491	Prss35	ENSMUST00000036426	ENSMUSP00000035271	TRANSLATION	protein_coding	-	CCDS40714.1	1	409	2	0	0.5	36.5	0	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000033491	Prss35	ENSMUST00000179574	ENSMUSP00000137445	TRANSLATION	protein_coding	-	CCDS40714.1	1	409	2	0	0.5	36.5	0	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000079644	Gm1110	ENSMUST00000214847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079644	Gm1110	ENSMUST00000214461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079644	Gm1110	ENSMUST00000217197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079644	Gm1110	ENSMUST00000115261	ENSMUSP00000110916	TRANSLATION	protein_coding	-	-	5	635	0	11.88	0.5	304.3	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000079323	Gm20661	ENSMUST00000176382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079323	Gm20661	ENSMUST00000176166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079323	Gm20661	ENSMUST00000177368	ENSMUSP00000135553	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	53	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000058856	Olfr952	ENSMUST00000073895	ENSMUSP00000073558	TRANSLATION	protein_coding	-	CCDS23045.1	-	314	0	0.16	1.5	141.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032010	Usp2	ENSMUST00000176671	ENSMUSP00000135859	TRANSLATION	protein_coding	stop	-	3	174	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032010	Usp2	ENSMUST00000177054	ENSMUSP00000135018	TRANSLATION	protein_coding	-	CCDS23094.1	1	619	8	9.5	1.5	246.4	0	-4,-7	-	-	18.228	MINOR
ENSMUSG00000032010	Usp2	ENSMUST00000034508	ENSMUSP00000034508	TRANSLATION	protein_coding	-	CCDS23094.1	1	619	8	9.5	1.5	246.4	0	-4,-7	-	-	18.228	MINOR
ENSMUSG00000032010	Usp2	ENSMUST00000176022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032010	Usp2	ENSMUST00000176416	ENSMUSP00000135482	TRANSLATION	protein_coding	-	-	1	393	8	9.5	7.6	246.4	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000032010	Usp2	ENSMUST00000114830	ENSMUSP00000110479	TRANSLATION	protein_coding	-	CCDS23094.1	1	619	8	9.5	1.5	246.4	0	-4,-7	-	-	18.228	MINOR
ENSMUSG00000032010	Usp2	ENSMUST00000177422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032010	Usp2	ENSMUST00000175816	ENSMUSP00000135788	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000032010	Usp2	ENSMUST00000065461	ENSMUSP00000070264	TRANSLATION	protein_coding	-	CCDS23095.1	1	396	8	9.5	7.6	246.4	0	-4,-7	-	-	21	PRINCIPAL:2
ENSMUSG00000023262	Acy1	ENSMUST00000024031	ENSMUSP00000024031	TRANSLATION	protein_coding	-	CCDS23477.1	1	408	10	10.338	5.1	179.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000023262	Acy1	ENSMUST00000216400	ENSMUSP00000149636	TRANSLATION	protein_coding	-	-	5	336	6	8.088	1.2	88.8	0	-4,-5	-	-	5.468	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000190851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023262	Acy1	ENSMUST00000215506	ENSMUSP00000150039	TRANSLATION	nonsense_mediated_decay	-	-	5	201	5	6.042	0	86.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000190972	ENSMUSP00000139953	TRANSLATION	protein_coding	stop	-	3	219	7	6.66	0	87.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000190900	ENSMUSP00000140582	TRANSLATION	protein_coding	stop	-	3	50	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000189097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023262	Acy1	ENSMUST00000187324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023262	Acy1	ENSMUST00000215395	ENSMUSP00000149394	TRANSLATION	protein_coding	-	-	5	343	8	9.24	2.4	129	0	-4,-5	-	-	12.1	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000190803	ENSMUSP00000139931	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000214275	ENSMUSP00000149789	TRANSLATION	protein_coding	-	-	5	373	9	9.338	0	162.1	0	-4,-5	-	-	14.268	MINOR
ENSMUSG00000023262	Acy1	ENSMUST00000217531	ENSMUSP00000149516	TRANSLATION	protein_coding	start/stop	-	5	155	4	2.348	0	47.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000066773	ENSMUSP00000069688	TRANSLATION	protein_coding	-	CCDS52899.1	1	530	11	8.6	8.8	75.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000075941	ENSMUSP00000075327	TRANSLATION	protein_coding	-	CCDS52900.1	5	1150	11	8.6	1.5	75.5	0	-4,-7	-	-	18.192	MINOR
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000185719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000188612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000185735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000191226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043154	Ppp2r3a	ENSMUST00000185887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059383	Gfral	ENSMUST00000184693	ENSMUSP00000139120	TRANSLATION	nonsense_mediated_decay	-	-	1	238	0	0.6	0	43.7	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000059383	Gfral	ENSMUST00000074880	ENSMUSP00000074421	TRANSLATION	protein_coding	-	CCDS40694.1	1	393	0	0.78	0.5	85.9	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000056617	4931429L15Rik	ENSMUST00000172280	ENSMUSP00000128017	TRANSLATION	protein_coding	-	CCDS52785.1	5	379	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000056617	4931429L15Rik	ENSMUST00000160795	ENSMUSP00000123966	TRANSLATION	protein_coding	stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056617	4931429L15Rik	ENSMUST00000159565	ENSMUSP00000124991	TRANSLATION	protein_coding	-	CCDS52785.1	2	379	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000066233	Tmem42	ENSMUST00000214785	ENSMUSP00000149811	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000066233	Tmem42	ENSMUST00000213514	ENSMUSP00000149571	TRANSLATION	protein_coding	-	-	3	129	0	0	0.5	0	0	-3,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000066233	Tmem42	ENSMUST00000214077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066233	Tmem42	ENSMUST00000084733	ENSMUSP00000081784	TRANSLATION	protein_coding	-	CCDS23652.1	1	157	0	0	3.9	0	0	-3,-6	-	-	1	PRINCIPAL:2
ENSMUSG00000032062	2310030G06Rik	ENSMUST00000034564	ENSMUSP00000034564	TRANSLATION	protein_coding	-	-	1	127	0	0	1	210	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000032062	2310030G06Rik	ENSMUST00000215877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032062	2310030G06Rik	ENSMUST00000239417	ENSMUSP00000159377	TRANSLATION	protein_coding	-	CCDS23170.1	-	141	0	0	0.5	210	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000023277	Twf2	ENSMUST00000217523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023277	Twf2	ENSMUST00000188650	ENSMUSP00000140339	TRANSLATION	protein_coding	-	-	1	347	0	8.496	0	131.2	0	-4,-6	-	-	11.472	MINOR
ENSMUSG00000023277	Twf2	ENSMUST00000187944	ENSMUSP00000139905	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023277	Twf2	ENSMUST00000216850	ENSMUSP00000150259	TRANSLATION	protein_coding	start/stop	-	5	207	0	5.58	0	108.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023277	Twf2	ENSMUST00000216541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023277	Twf2	ENSMUST00000187647	ENSMUSP00000140617	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	1.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023277	Twf2	ENSMUST00000216348	ENSMUSP00000150626	TRANSLATION	protein_coding	stop	-	5	235	0	5.93	0	43	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023277	Twf2	ENSMUST00000024047	ENSMUSP00000024047	TRANSLATION	protein_coding	-	CCDS23473.1	1	349	0	8.76	17	131.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000023277	Twf2	ENSMUST00000189708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032422	Snx14	ENSMUST00000126405	ENSMUSP00000116773	TRANSLATION	nonsense_mediated_decay	-	-	1	183	0	0	0	43.2	6	-4,-2	-	-	-1	MINOR
ENSMUSG00000032422	Snx14	ENSMUST00000126563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032422	Snx14	ENSMUST00000140439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032422	Snx14	ENSMUST00000187610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032422	Snx14	ENSMUST00000239462	ENSMUSP00000159306	TRANSLATION	protein_coding	-	CCDS23387.2	-	964	0	5.475	0.5	301.6	6	-4,-1	-	-	12	MINOR
ENSMUSG00000032422	Snx14	ENSMUST00000173039	ENSMUSP00000133624	TRANSLATION	protein_coding	-	-	5	893	0	5.475	2.4	245.1	6	-4,-2	-	-	9.276	MINOR
ENSMUSG00000032422	Snx14	ENSMUST00000165315	ENSMUSP00000130116	TRANSLATION	protein_coding	-	-	1	937	0	5.475	4.9	301.6	6	-4,-2	-	-	13.857	MINOR
ENSMUSG00000032422	Snx14	ENSMUST00000173011	ENSMUSP00000133507	TRANSLATION	protein_coding	-	-	5	665	0	0.855	0	216.2	6	-4,-2	-	-	0.876	MINOR
ENSMUSG00000032422	Snx14	ENSMUST00000174806	ENSMUSP00000133533	TRANSLATION	protein_coding	-	-	5	946	0	5.475	7.3	301.6	6	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000023186	Vwa5a	ENSMUST00000118144	ENSMUSP00000113596	TRANSLATION	protein_coding	-	CCDS23024.1	1	793	4	0	0.5	189.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000023186	Vwa5a	ENSMUST00000130295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023186	Vwa5a	ENSMUST00000129598	ENSMUSP00000116251	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023186	Vwa5a	ENSMUST00000149376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023186	Vwa5a	ENSMUST00000001544	ENSMUSP00000001544	TRANSLATION	protein_coding	-	CCDS23024.1	1	793	4	0	0.5	189.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000023186	Vwa5a	ENSMUST00000137972	ENSMUSP00000121104	TRANSLATION	nonsense_mediated_decay	start	-	5	137	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000023186	Vwa5a	ENSMUST00000152295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032463	Faim	ENSMUST00000187211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032463	Faim	ENSMUST00000035038	ENSMUSP00000035038	TRANSLATION	protein_coding	-	CCDS23431.1	1	179	0	3.5	21.5	294.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000032463	Faim	ENSMUST00000186837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032463	Faim	ENSMUST00000185472	ENSMUSP00000140627	TRANSLATION	protein_coding	stop	-	2	174	0	3.5	5.7	290.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032463	Faim	ENSMUST00000112911	ENSMUSP00000108532	TRANSLATION	protein_coding	-	CCDS52897.1	2	201	0	3.5	7.5	294.9	0	-4,-5	-	-	13.268	MINOR
ENSMUSG00000054693	Adam10	ENSMUST00000144537	ENSMUSP00000116867	TRANSLATION	protein_coding	stop	-	5	144	0	1.084	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000054693	Adam10	ENSMUST00000145377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054693	Adam10	ENSMUST00000067880	ENSMUSP00000063839	TRANSLATION	protein_coding	-	CCDS23323.1	1	749	11	7.544	1.5	219.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000054693	Adam10	ENSMUST00000140205	ENSMUSP00000117162	TRANSLATION	nonsense_mediated_decay	-	-	5	513	11	4.148	0	165.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032358	Fam83b	ENSMUST00000183437	ENSMUSP00000139354	TRANSLATION	protein_coding	-	CCDS40695.1	1	1012	0	2.6	0.5	354.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032358	Fam83b	ENSMUST00000098546	ENSMUSP00000096146	TRANSLATION	protein_coding	-	CCDS40695.1	1	1012	0	2.6	0.5	354.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040111	Gramd1b	ENSMUST00000129940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040111	Gramd1b	ENSMUST00000121357	ENSMUSP00000112564	TRANSLATION	protein_coding	-	-	1	734	0	1.761	0	221.8	1	-4,-1	-	-	12	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000118159	ENSMUSP00000112417	TRANSLATION	protein_coding	-	-	5	698	0	1.761	3.9	221.8	1	-4,-5	-	-	13.317	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000165104	ENSMUSP00000130050	TRANSLATION	protein_coding	-	CCDS23081.1	5	878	0	1.761	7.6	221.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040111	Gramd1b	ENSMUST00000137189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040111	Gramd1b	ENSMUST00000239052	ENSMUSP00000159027	TRANSLATION	protein_coding	stop	-	-	133	0	0.78	0	69.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000119373	ENSMUSP00000112489	TRANSLATION	protein_coding	-	-	1	761	0	1.761	1.7	221.8	3	-4,-2	-	-	12.318	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000150977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040111	Gramd1b	ENSMUST00000211853	ENSMUSP00000148499	TRANSLATION	protein_coding	-	-	5	767	0	1.761	0	221.8	1	-4,-2	-	-	12	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000153029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040111	Gramd1b	ENSMUST00000148170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040111	Gramd1b	ENSMUST00000155265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040111	Gramd1b	ENSMUST00000137454	ENSMUSP00000116871	TRANSLATION	protein_coding	start	-	1	489	0	0	0	127.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000216821	ENSMUSP00000148890	TRANSLATION	protein_coding	-	-	5	734	0	1.761	4.1	221.8	3	-4,-1	-	-	13.41	MINOR
ENSMUSG00000040111	Gramd1b	ENSMUST00000045682	ENSMUSP00000048126	TRANSLATION	protein_coding	-	CCDS23081.1	1	878	0	1.761	7.6	221.8	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035448	Ccr3	ENSMUST00000039171	ENSMUSP00000039107	TRANSLATION	protein_coding	-	CCDS23668.1	1	359	0	0.8	3.9	173.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000034263	Ints14	ENSMUST00000170517	ENSMUSP00000127420	TRANSLATION	protein_coding	-	CCDS40668.1	1	515	3	0	13.8	65.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000034263	Ints14	ENSMUST00000215789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034263	Ints14	ENSMUST00000037504	ENSMUSP00000049284	TRANSLATION	protein_coding	-	CCDS40668.1	1	515	3	0	13.8	65.9	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000039714	Cplx3	ENSMUST00000045068	ENSMUSP00000046748	TRANSLATION	protein_coding	-	CCDS23226.1	1	158	0	0	11	157.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039714	Cplx3	ENSMUST00000217015	ENSMUSP00000150682	TRANSLATION	protein_coding	-	-	2	46	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000039714	Cplx3	ENSMUST00000215487	ENSMUSP00000149521	TRANSLATION	protein_coding	-	-	3	75	0	0	0	56.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041248	Kcnj1	ENSMUST00000213393	ENSMUSP00000150540	TRANSLATION	protein_coding	-	CCDS22953.1	5	372	0	1	14.8	471.8	4	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000041248	Kcnj1	ENSMUST00000047334	ENSMUSP00000046793	TRANSLATION	protein_coding	-	CCDS22953.1	1	372	0	1	14.8	471.8	4	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000041248	Kcnj1	ENSMUST00000172015	ENSMUSP00000131625	TRANSLATION	protein_coding	-	CCDS52751.1	1	392	0	1	2.7	471.8	4	-4,-1	-	-	12.492	MINOR
ENSMUSG00000032224	Fam81a	ENSMUST00000145427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032224	Fam81a	ENSMUST00000141775	ENSMUSP00000114179	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032224	Fam81a	ENSMUST00000123206	ENSMUSP00000123535	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032224	Fam81a	ENSMUST00000034749	ENSMUSP00000034749	TRANSLATION	protein_coding	-	CCDS40679.1	1	364	0	0	7.5	0	0	-4,-1	-	-	3	PRINCIPAL:1
ENSMUSG00000023249	Parp3	ENSMUST00000214682	ENSMUSP00000149572	TRANSLATION	protein_coding	stop	-	5	351	0	6.68	0	274	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023249	Parp3	ENSMUST00000156426	ENSMUSP00000117329	TRANSLATION	protein_coding	stop	-	3	202	0	3.6	0	97	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023249	Parp3	ENSMUST00000140029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023249	Parp3	ENSMUST00000112479	ENSMUSP00000108098	TRANSLATION	protein_coding	-	CCDS81066.1	1	533	2	10.18	1.5	421.9	0	-4,-7	-	-	14	ALTERNATIVE:2
ENSMUSG00000023249	Parp3	ENSMUST00000139362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023249	Parp3	ENSMUST00000123555	ENSMUSP00000123054	TRANSLATION	protein_coding	-	CCDS23480.1	1	528	2	10.18	1.5	421.9	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000023249	Parp3	ENSMUST00000125850	ENSMUSP00000119244	TRANSLATION	protein_coding	stop	-	3	171	0	2.666	0	97	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023249	Parp3	ENSMUST00000145396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023249	Parp3	ENSMUST00000067218	ENSMUSP00000064513	TRANSLATION	protein_coding	-	CCDS23480.1	1	528	2	10.18	1.5	421.9	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000074829	2010315B03Rik	ENSMUST00000189915	ENSMUSP00000140738	TRANSLATION	protein_coding	stop	-	3	151	12	2.75	0	131.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074829	2010315B03Rik	ENSMUST00000177714	ENSMUSP00000137258	TRANSLATION	protein_coding	-	CCDS81096.1	1	433	48	4.23	0.5	333.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074829	2010315B03Rik	ENSMUST00000185949	ENSMUSP00000140144	TRANSLATION	protein_coding	stop	-	3	175	11	2.75	0	111	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074829	2010315B03Rik	ENSMUST00000071300	ENSMUSP00000071269	TRANSLATION	protein_coding	stop	-	3	238	20	3.75	0	221.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074829	2010315B03Rik	ENSMUST00000186041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032086	Bace1	ENSMUST00000078111	ENSMUSP00000077249	TRANSLATION	protein_coding	-	CCDS52784.1	1	467	3	9.41	0.5	127.2	1	1,-2	-	-	11.34	MINOR
ENSMUSG00000032086	Bace1	ENSMUST00000162559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032086	Bace1	ENSMUST00000159970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032086	Bace1	ENSMUST00000034591	ENSMUSP00000034591	TRANSLATION	protein_coding	-	CCDS23135.1	1	501	5	10.41	5.1	154.9	1	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000032086	Bace1	ENSMUST00000159499	ENSMUSP00000124773	TRANSLATION	nonsense_mediated_decay	start	-	1	65	3	1.83	0	34.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032086	Bace1	ENSMUST00000162587	ENSMUSP00000124960	TRANSLATION	protein_coding	start	-	5	360	2	7.08	0	98.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000032278	Paqr5	ENSMUST00000034817	ENSMUSP00000034817	TRANSLATION	protein_coding	-	CCDS23261.1	1	330	0	2.76	7.5	192.6	8	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000032278	Paqr5	ENSMUST00000113990	ENSMUSP00000109623	TRANSLATION	protein_coding	-	-	1	316	0	2.56	6.3	192.6	8	-4,-7	-	-	14.013	ALTERNATIVE:1
ENSMUSG00000032278	Paqr5	ENSMUST00000135050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037405	Icam1	ENSMUST00000086399	ENSMUSP00000083587	TRANSLATION	protein_coding	-	CCDS22889.1	1	537	0	4.8	0.5	160.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000037405	Icam1	ENSMUST00000215003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058587	Tmod3	ENSMUST00000214424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058587	Tmod3	ENSMUST00000214171	ENSMUSP00000149300	TRANSLATION	protein_coding	stop	-	3	107	0	2.5	0	153.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058587	Tmod3	ENSMUST00000215821	ENSMUSP00000148851	TRANSLATION	protein_coding	-	-	3	106	0	2	0	139.3	0	-4,-5	-	-	2.202	MINOR
ENSMUSG00000058587	Tmod3	ENSMUST00000072232	ENSMUSP00000072087	TRANSLATION	protein_coding	-	CCDS23344.1	1	352	0	6.99	11.6	202.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058587	Tmod3	ENSMUST00000214733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058587	Tmod3	ENSMUST00000217459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032434	Cmtm6	ENSMUST00000035007	ENSMUSP00000035007	TRANSLATION	protein_coding	-	CCDS23596.1	1	183	0	0	3.9	43.7	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000032434	Cmtm6	ENSMUST00000217637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061614	Olfr845	ENSMUST00000213344	ENSMUSP00000149986	TRANSLATION	protein_coding	-	CCDS22854.1	5	312	0	0.42	1.5	190.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061614	Olfr845	ENSMUST00000071259	ENSMUSP00000071239	TRANSLATION	protein_coding	-	CCDS22854.1	-	312	0	0.42	1.5	190.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061614	Olfr845	ENSMUST00000215572	ENSMUSP00000150474	TRANSLATION	protein_coding	-	CCDS22854.1	3	312	0	0.42	1.5	190.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035337	Uchl4	ENSMUST00000039011	ENSMUSP00000045208	TRANSLATION	protein_coding	-	CCDS23278.1	-	233	4	1	17	218.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042262	Ccr8	ENSMUST00000048777	ENSMUSP00000038473	TRANSLATION	protein_coding	-	CCDS23621.1	1	353	0	0.6	2.7	146.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032380	Dapk2	ENSMUST00000129442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032380	Dapk2	ENSMUST00000132987	ENSMUSP00000117134	TRANSLATION	nonsense_mediated_decay	start	-	5	55	2	1	0	49.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032380	Dapk2	ENSMUST00000034944	ENSMUSP00000034944	TRANSLATION	protein_coding	-	CCDS23303.1	1	370	19	8.83	2.9	250.3	0	-4,-6	-	-	18.731	PRINCIPAL:1
ENSMUSG00000032380	Dapk2	ENSMUST00000129778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032380	Dapk2	ENSMUST00000238682	ENSMUSP00000158747	TRANSLATION	protein_coding	-	-	-	490	19	6.33	3.6	250.3	0	-4,-6	-	-	14.002	MINOR
ENSMUSG00000032220	Myo1e	ENSMUST00000034745	ENSMUSP00000034745	TRANSLATION	protein_coding	-	CCDS40680.1	1	1107	15	19.27	7.5	1084	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000032220	Myo1e	ENSMUST00000214767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032220	Myo1e	ENSMUST00000214042	ENSMUSP00000150376	TRANSLATION	nonsense_mediated_decay	-	-	1	116	6	2.8	0	116.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032220	Myo1e	ENSMUST00000213863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102037	Bcl2a1a	ENSMUST00000098485	ENSMUSP00000096086	TRANSLATION	protein_coding	-	CCDS23391.1	1	172	0	1.8	5.1	87.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032098	Treh	ENSMUST00000034609	ENSMUSP00000034609	TRANSLATION	protein_coding	-	CCDS23117.1	1	576	14	7.77	0.5	609.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032098	Treh	ENSMUST00000139389	ENSMUSP00000120671	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	1.04	0	64.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032098	Treh	ENSMUST00000150822	ENSMUSP00000123144	TRANSLATION	nonsense_mediated_decay	start	-	3	124	6	1.59	0	99.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032098	Treh	ENSMUST00000071219	ENSMUSP00000071206	TRANSLATION	protein_coding	-	CCDS72222.1	1	541	11	6.25	0.5	466.5	0	2,-2	-	-	6.96	MINOR
ENSMUSG00000046167	Gldn	ENSMUST00000056740	ENSMUSP00000056080	TRANSLATION	protein_coding	-	CCDS23189.1	1	549	0	5.55	1.5	261.6	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000032352	Lrrc1	ENSMUST00000183572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032352	Lrrc1	ENSMUST00000183980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032352	Lrrc1	ENSMUST00000183873	ENSMUSP00000139226	TRANSLATION	protein_coding	-	CCDS72282.1	1	524	0	10.48	13.5	129.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000032352	Lrrc1	ENSMUST00000184811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032352	Lrrc1	ENSMUST00000183734	ENSMUSP00000138912	TRANSLATION	protein_coding	-	-	1	349	0	8.35	0	129.3	0	-4,-7	-	-	7.74	MINOR
ENSMUSG00000032352	Lrrc1	ENSMUST00000184099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032352	Lrrc1	ENSMUST00000113421	ENSMUSP00000109048	TRANSLATION	protein_coding	-	CCDS52862.1	1	479	0	9.944	0.5	93.8	0	-4,-2	-	-	8.796	MINOR
ENSMUSG00000032352	Lrrc1	ENSMUST00000183467	ENSMUSP00000138934	TRANSLATION	nonsense_mediated_decay	start	-	5	63	0	0.93	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047050	Olfr914	ENSMUST00000217057	ENSMUSP00000150241	TRANSLATION	protein_coding	-	CCDS23019.1	3	316	0	0.2	1.5	162.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047050	Olfr914	ENSMUST00000057755	ENSMUSP00000053405	TRANSLATION	protein_coding	-	CCDS23019.1	-	316	0	0.2	1.5	162.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042487	Leo1	ENSMUST00000213248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042487	Leo1	ENSMUST00000048937	ENSMUSP00000046905	TRANSLATION	protein_coding	-	CCDS23343.1	1	667	0	3.35	0.5	187.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042487	Leo1	ENSMUST00000213767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053070	Cfap300	ENSMUST00000065291	ENSMUSP00000063450	TRANSLATION	protein_coding	-	CCDS22813.1	1	267	0	0	8.3	367.1	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000053070	Cfap300	ENSMUST00000215478	ENSMUSP00000149159	TRANSLATION	protein_coding	-	-	1	99	0	0	0	83.3	0	-4,-2	-	-	0	MINOR
ENSMUSG00000033054	Npat	ENSMUST00000035850	ENSMUSP00000048709	TRANSLATION	protein_coding	-	CCDS40637.1	1	1420	0	0	0.5	1055.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033054	Npat	ENSMUST00000148336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022245	Skor1	ENSMUST00000119146	ENSMUSP00000113924	TRANSLATION	protein_coding	-	CCDS52829.1	1	936	4	0	0.5	237.7	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000022245	Skor1	ENSMUST00000055281	ENSMUSP00000055037	TRANSLATION	protein_coding	-	CCDS23268.1	1	964	4	0	1.5	237.7	0	-4,-7	-	-	10	PRINCIPAL:3
ENSMUSG00000022245	Skor1	ENSMUST00000116613	ENSMUSP00000112312	TRANSLATION	protein_coding	-	CCDS52828.1	1	925	4	0	1.5	237.7	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000039542	Ncam1	ENSMUST00000217121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039542	Ncam1	ENSMUST00000194844	ENSMUSP00000141730	TRANSLATION	protein_coding	start/stop	-	5	49	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039542	Ncam1	ENSMUST00000166811	ENSMUSP00000130668	TRANSLATION	protein_coding	-	CCDS80993.1	1	849	0	14.01	5.2	364.4	1	2,-3	-	-	13.982	ALTERNATIVE:1
ENSMUSG00000039542	Ncam1	ENSMUST00000194252	ENSMUSP00000142331	TRANSLATION	protein_coding	start	-	5	1089	0	13.458	0	338.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000039542	Ncam1	ENSMUST00000192584	ENSMUSP00000141700	TRANSLATION	protein_coding	-	-	1	605	0	11.68	0	327.3	0	2,-3	-	-	5.094	MINOR
ENSMUSG00000039542	Ncam1	ENSMUST00000114476	ENSMUSP00000110120	TRANSLATION	protein_coding	-	CCDS40618.1	1	725	0	14.01	3.9	364.7	0	2,-3	-	-	13.38	ALTERNATIVE:2
ENSMUSG00000039542	Ncam1	ENSMUST00000193547	ENSMUSP00000142275	TRANSLATION	protein_coding	-	CCDS40617.1	1	848	0	14.01	5.2	364.4	1	2,-3	-	-	13.982	PRINCIPAL:4
ENSMUSG00000079334	Naa80	ENSMUST00000122985	ENSMUSP00000122807	TRANSLATION	protein_coding	stop	-	2	204	12	0	0	36.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000127380	ENSMUSP00000116378	TRANSLATION	protein_coding	stop	-	2	204	12	0	0	36.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000139274	ENSMUSP00000138933	TRANSLATION	protein_coding,RT	stop	-	2	105	12	0	0	36.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000130053	ENSMUSP00000114490	TRANSLATION	protein_coding	stop	-	2	204	12	0	0	36.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000149638	ENSMUSP00000139004	TRANSLATION	protein_coding,RT	stop	-	2	105	12	0	0	36.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000139581	ENSMUSP00000122321	TRANSLATION	protein_coding	stop	-	2	204	12	0	0	36.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079334	Naa80	ENSMUST00000093785	ENSMUSP00000091300	TRANSLATION	protein_coding	-	CCDS23498.1	1	314	20	0	1.5	37.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096393	Fam240a	ENSMUST00000177678	ENSMUSP00000136900	TRANSLATION	protein_coding	-	CCDS57707.1	2	97	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000056880	Gadl1	ENSMUST00000069651	ENSMUSP00000077694	TRANSLATION	protein_coding	-	CCDS52954.1	5	502	18	11.73	5.2	371.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000056880	Gadl1	ENSMUST00000119291	ENSMUSP00000112433	TRANSLATION	protein_coding	-	-	1	478	18	10.73	0	371.9	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000056880	Gadl1	ENSMUST00000121770	ENSMUSP00000113240	TRANSLATION	protein_coding	-	CCDS52954.1	5	502	18	11.73	5.2	371.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000095667	Olfr854	ENSMUST00000212872	ENSMUSP00000148270	TRANSLATION	protein_coding	-	-	-	312	0	0.42	1.5	173.3	5	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000095667	Olfr854	ENSMUST00000072419	ENSMUSP00000072248	TRANSLATION	protein_coding	-	CCDS22861.1	-	315	0	0.42	1.5	173.3	5	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000094182	Olfr937	ENSMUST00000215049	ENSMUSP00000150274	TRANSLATION	protein_coding	-	CCDS23037.1	3	311	0	0.2	1.5	166	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094182	Olfr937	ENSMUST00000055567	ENSMUSP00000058346	TRANSLATION	protein_coding	-	CCDS23037.1	-	311	0	0.2	1.5	166	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032381	Ciao2a	ENSMUST00000034945	ENSMUSP00000034945	TRANSLATION	protein_coding	-	CCDS23302.1	1	160	0	3.8	8.8	34.1	0	-2,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031935	Med17	ENSMUST00000213788	ENSMUSP00000148980	TRANSLATION	protein_coding	start	-	3	199	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031935	Med17	ENSMUST00000034411	ENSMUSP00000034411	TRANSLATION	protein_coding	-	CCDS22834.1	1	649	0	0	8.8	38.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000031935	Med17	ENSMUST00000213356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031935	Med17	ENSMUST00000216406	ENSMUSP00000150968	TRANSLATION	protein_coding	stop	-	5	211	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095527	Olfr888	ENSMUST00000211851	ENSMUSP00000148476	TRANSLATION	protein_coding	-	-	2	309	0	0.2	5.1	164.9	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000095527	Olfr888	ENSMUST00000075228	ENSMUSP00000074713	TRANSLATION	protein_coding	-	CCDS22997.1	-	314	0	0.2	2.7	164.9	5	-4,-7	-	-	12.83	MINOR
ENSMUSG00000062257	Opcml	ENSMUST00000214395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062257	Opcml	ENSMUST00000073822	ENSMUSP00000073493	TRANSLATION	protein_coding	-	-	5	345	0	4.95	9.6	153.3	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000062257	Opcml	ENSMUST00000150098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062257	Opcml	ENSMUST00000133142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062257	Opcml	ENSMUST00000115243	ENSMUSP00000110898	TRANSLATION	protein_coding	-	CCDS22942.1	1	337	0	4.8	3.9	152.4	0	0,-3	-	-	12.657	MINOR
ENSMUSG00000062257	Opcml	ENSMUST00000134002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062257	Opcml	ENSMUST00000123779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062257	Opcml	ENSMUST00000126673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062257	Opcml	ENSMUST00000126845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079433	Gm11114	ENSMUST00000113205	ENSMUSP00000108831	TRANSLATION	protein_coding	start/stop	-	5	19	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096201	Gm10715	ENSMUST00000155807	ENSMUSP00000136448	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	0	1	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096201	Gm10715	ENSMUST00000177969	ENSMUSP00000137129	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	1	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000096757	Olfr251	ENSMUST00000072731	ENSMUSP00000072514	TRANSLATION	protein_coding	-	CCDS57671.1	-	316	0	0.292	1.5	166.1	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096757	Olfr251	ENSMUST00000214865	ENSMUSP00000149583	TRANSLATION	protein_coding	-	-	5	310	0	0.16	2.7	166.1	6	-4,-7	-	-	9.288	MINOR
ENSMUSG00000074305	Peak1	ENSMUST00000188142	ENSMUSP00000139985	TRANSLATION	protein_coding	-	-	1	705	0	0.14	0	45	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074305	Peak1	ENSMUST00000185775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074305	Peak1	ENSMUST00000061552	ENSMUSP00000109901	TRANSLATION	protein_coding	-	CCDS52804.1	1	1735	0	0.14	1.5	45	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000074305	Peak1	ENSMUST00000186735	ENSMUSP00000140080	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041696	Rasl12	ENSMUST00000217172	ENSMUSP00000150153	TRANSLATION	nonsense_mediated_decay	-	-	5	39	3	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041696	Rasl12	ENSMUST00000085453	ENSMUSP00000082580	TRANSLATION	protein_coding	-	CCDS23290.1	1	266	19	4.05	6.3	108.6	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000041696	Rasl12	ENSMUST00000165682	ENSMUSP00000131837	TRANSLATION	protein_coding	-	CCDS52837.1	1	172	19	3.45	0.5	76.5	0	-4,-2	-	-	14.874	MINOR
ENSMUSG00000041696	Rasl12	ENSMUST00000215605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058659	Olfr58	ENSMUST00000215112	ENSMUSP00000150309	TRANSLATION	protein_coding	-	CCDS22863.1	2	309	0	1.58	2.7	174.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058659	Olfr58	ENSMUST00000212363	ENSMUSP00000148538	TRANSLATION	protein_coding	stop	-	3	48	0	0.8	0	38.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032547	Ryk	ENSMUST00000175788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032547	Ryk	ENSMUST00000175883	ENSMUSP00000135858	TRANSLATION	protein_coding	-	CCDS40747.1	1	594	17	6	1.5	425.1	1	-1,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000032547	Ryk	ENSMUST00000035142	ENSMUSP00000035142	TRANSLATION	protein_coding	-	CCDS57696.1	1	591	17	6	1.5	425.1	1	-1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000032547	Ryk	ENSMUST00000176573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032547	Ryk	ENSMUST00000177274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032547	Ryk	ENSMUST00000176198	ENSMUSP00000135396	TRANSLATION	nonsense_mediated_decay	-	-	1	62	0	0	0	0	0	-1,-2	-	-	-1	MINOR
ENSMUSG00000037953	A4gnt	ENSMUST00000042553	ENSMUSP00000045629	TRANSLATION	protein_coding	-	CCDS40740.1	1	341	2	0	2.9	232.6	0	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000096519	Gm10721	ENSMUST00000143083	ENSMUSP00000137330	TRANSLATION	protein_coding	start/stop	-	5	223	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000032122	Slc37a2	ENSMUST00000115068	ENSMUSP00000110720	TRANSLATION	protein_coding	-	CCDS40582.1	1	501	0	4.215	1.5	135.7	10	-3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000032122	Slc37a2	ENSMUST00000161114	ENSMUSP00000124569	TRANSLATION	protein_coding	-	CCDS52769.1	1	506	0	4.215	1.5	135.7	10	-3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032122	Slc37a2	ENSMUST00000162018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033335	Dnm2	ENSMUST00000115404	ENSMUSP00000111063	TRANSLATION	protein_coding	-	-	5	870	21	17.73	8.8	697.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000033335	Dnm2	ENSMUST00000165766	ENSMUSP00000128961	TRANSLATION	protein_coding	-	CCDS57658.1	1	860	21	17.73	3.9	697.9	0	-4,-6	-	-	19.116	MINOR
ENSMUSG00000033335	Dnm2	ENSMUST00000172763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033335	Dnm2	ENSMUST00000172873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033335	Dnm2	ENSMUST00000173397	ENSMUSP00000134243	TRANSLATION	protein_coding	-	CCDS57660.1	1	869	21	17.73	8.8	696.4	0	-4,-6	-	-	20.91	PRINCIPAL:4
ENSMUSG00000033335	Dnm2	ENSMUST00000172833	ENSMUSP00000133858	TRANSLATION	protein_coding	start/stop	-	3	248	0	6.085	0	206.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033335	Dnm2	ENSMUST00000091087	ENSMUSP00000088616	TRANSLATION	protein_coding	-	CCDS57659.1	1	866	21	17.73	8.8	697.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000033335	Dnm2	ENSMUST00000174243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033335	Dnm2	ENSMUST00000173299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033335	Dnm2	ENSMUST00000072362	ENSMUSP00000072199	TRANSLATION	protein_coding	-	-	1	870	21	17.73	8.8	696.4	0	-4,-6	-	-	20.91	ALTERNATIVE:1
ENSMUSG00000033335	Dnm2	ENSMUST00000174050	ENSMUSP00000134696	TRANSLATION	protein_coding	start	-	5	807	14	16.73	0	659.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033335	Dnm2	ENSMUST00000169194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033335	Dnm2	ENSMUST00000174828	ENSMUSP00000133961	TRANSLATION	nonsense_mediated_decay	-	-	5	69	7	1.2	0	26.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033335	Dnm2	ENSMUST00000172482	ENSMUSP00000133564	TRANSLATION	protein_coding	-	CCDS57657.1	5	870	21	17.73	8.8	697.9	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000118396	Iqcf2	ENSMUST00000062917	ENSMUSP00000054276	TRANSLATION	protein_coding	-	CCDS40758.1	1	203	0	0	0.5	20.2	0	-4,-5	-	-	3.552	MINOR
ENSMUSG00000118396	Iqcf2	ENSMUST00000189866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118396	Iqcf2	ENSMUST00000215525	ENSMUSP00000158670	TRANSLATION	protein_coding	-	-	2	171	0	0	0.5	34.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046111	Cep295	ENSMUST00000161533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000160692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000098979	ENSMUSP00000096578	TRANSLATION	protein_coding	-	CCDS52727.1	5	2380	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000046111	Cep295	ENSMUST00000162264	ENSMUSP00000123748	TRANSLATION	protein_coding	start/stop	-	3	257	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046111	Cep295	ENSMUST00000059410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000159156	ENSMUSP00000123950	TRANSLATION	protein_coding	start/stop	-	5	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046111	Cep295	ENSMUST00000160238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000160946	ENSMUSP00000125494	TRANSLATION	protein_coding	start	-	5	1202	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046111	Cep295	ENSMUST00000058041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000162689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000161132	ENSMUSP00000123788	TRANSLATION	protein_coding	-	-	5	2460	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000046111	Cep295	ENSMUST00000217407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046111	Cep295	ENSMUST00000217140	ENSMUSP00000150266	TRANSLATION	protein_coding	start	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046111	Cep295	ENSMUST00000163010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032469	Dbr1	ENSMUST00000066650	ENSMUSP00000070991	TRANSLATION	protein_coding	-	CCDS23435.1	1	550	9	5.649	0.5	157.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032469	Dbr1	ENSMUST00000156035	ENSMUSP00000115978	TRANSLATION	protein_coding	start	-	5	148	2	2.659	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032469	Dbr1	ENSMUST00000138002	ENSMUSP00000119924	TRANSLATION	protein_coding	start/stop	-	3	164	6	3.244	0	20.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032469	Dbr1	ENSMUST00000148987	ENSMUSP00000115074	TRANSLATION	protein_coding	stop	-	3	231	5	3.984	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032469	Dbr1	ENSMUST00000136884	ENSMUSP00000114670	TRANSLATION	protein_coding	start	-	2	151	2	1.025	0	73.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032469	Dbr1	ENSMUST00000139796	ENSMUSP00000115203	TRANSLATION	nonsense_mediated_decay	start	-	3	83	2	1.35	0	33.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067399	Trim43c	ENSMUST00000163255	ENSMUSP00000129255	TRANSLATION	protein_coding	-	CCDS52883.1	1	446	8	2.598	0.5	29.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000067399	Trim43c	ENSMUST00000186363	ENSMUSP00000139715	TRANSLATION	protein_coding	-	-	1	445	8	2.598	0.5	29.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038664	Herc1	ENSMUST00000124969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038664	Herc1	ENSMUST00000140487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038664	Herc1	ENSMUST00000130854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038664	Herc1	ENSMUST00000144280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038664	Herc1	ENSMUST00000135600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038664	Herc1	ENSMUST00000042824	ENSMUSP00000044801	TRANSLATION	protein_coding	-	CCDS52840.1	5	4859	3	23.24	6.3	727.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000038664	Herc1	ENSMUST00000135159	ENSMUSP00000119991	TRANSLATION	protein_coding	start/stop	-	1	569	3	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041794	Myrip	ENSMUST00000133173	ENSMUSP00000122046	TRANSLATION	protein_coding	stop	-	3	211	8	2.6	0	269	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041794	Myrip	ENSMUST00000129168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041794	Myrip	ENSMUST00000214784	ENSMUSP00000149149	TRANSLATION	protein_coding	start/stop	-	5	539	8	1.6	0	690.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041794	Myrip	ENSMUST00000048121	ENSMUSP00000046891	TRANSLATION	protein_coding	-	CCDS23627.1	1	856	8	2.6	1.5	1382.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041794	Myrip	ENSMUST00000139665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049305	Ccdc71	ENSMUST00000193170	ENSMUSP00000142230	TRANSLATION	protein_coding	-	CCDS23527.1	1	433	0	0	0.5	548.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049305	Ccdc71	ENSMUST00000061209	ENSMUSP00000057891	TRANSLATION	protein_coding	-	CCDS23527.1	1	433	0	0	0.5	548.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049305	Ccdc71	ENSMUST00000193269	ENSMUSP00000141937	TRANSLATION	protein_coding	stop	-	3	92	0	0	0	203	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032231	Anxa2	ENSMUST00000154591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032231	Anxa2	ENSMUST00000123470	ENSMUSP00000122175	TRANSLATION	protein_coding	stop	-	5	196	5	6	0	163.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032231	Anxa2	ENSMUST00000134907	ENSMUSP00000117979	TRANSLATION	protein_coding	stop	-	5	176	5	5.25	0	163.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032231	Anxa2	ENSMUST00000143878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032231	Anxa2	ENSMUST00000136282	ENSMUSP00000117855	TRANSLATION	protein_coding	start	-	3	272	4	6.82	0	232.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032231	Anxa2	ENSMUST00000034756	ENSMUSP00000034756	TRANSLATION	protein_coding	-	CCDS23316.1	1	339	9	10	17	314.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032216	Nedd4	ENSMUST00000183375	ENSMUSP00000138852	TRANSLATION	protein_coding	stop	-	3	196	5	4.08	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032216	Nedd4	ENSMUST00000184287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032216	Nedd4	ENSMUST00000184386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032216	Nedd4	ENSMUST00000238368	ENSMUSP00000158642	TRANSLATION	nonsense_mediated_decay	-	-	-	496	11	7.08	0	162.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032216	Nedd4	ENSMUST00000238315	ENSMUSP00000158796	TRANSLATION	protein_coding	-	-	-	1136	6	14.51	0	466.6	0	-4,-2	-	-	1.518	MINOR
ENSMUSG00000032216	Nedd4	ENSMUST00000034740	ENSMUSP00000034740	TRANSLATION	protein_coding	-	CCDS72275.1	1	887	17	19.59	1.5	541.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032216	Nedd4	ENSMUST00000184333	ENSMUSP00000139190	TRANSLATION	protein_coding	-	-	1	195	7	5.45	0	97.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000032216	Nedd4	ENSMUST00000183451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032216	Nedd4	ENSMUST00000184737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032216	Nedd4	ENSMUST00000184450	ENSMUSP00000138983	TRANSLATION	protein_coding	-	-	1	305	11	6.53	0	119.2	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000032216	Nedd4	ENSMUST00000184180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032216	Nedd4	ENSMUST00000184020	ENSMUSP00000139297	TRANSLATION	nonsense_mediated_decay	start	-	3	30	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113705	ENSMUSP00000109335	TRANSLATION	protein_coding	-	CCDS52848.1	1	284	0	7.75	17.5	302.6	0	-4,-5	-	-	12.16	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000156899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032366	Tpm1	ENSMUST00000139046	ENSMUSP00000138514	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000129466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032366	Tpm1	ENSMUST00000113685	ENSMUSP00000109315	TRANSLATION	protein_coding	-	CCDS52845.1	1	284	0	7.75	17.5	326.1	0	-4,-5	-	-	13.57	ALTERNATIVE:1
ENSMUSG00000032366	Tpm1	ENSMUST00000113689	ENSMUSP00000109319	TRANSLATION	protein_coding	-	-	5	245	0	6.58	12.8	283.6	0	-4,-7	-	-	7.664	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113690	ENSMUSP00000109320	TRANSLATION	protein_coding	-	CCDS52842.1	3	245	0	6.6	15.3	298.9	0	-4,-7	-	-	9.158	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000034928	ENSMUSP00000034928	TRANSLATION	protein_coding	-	-	5	326	0	8.75	2.4	314.4	0	-4,-5	-	-	11.602	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000129733	ENSMUSP00000138784	TRANSLATION	nonsense_mediated_decay	-	-	5	157	0	3.12	0	116.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113684	ENSMUSP00000109314	TRANSLATION	protein_coding	-	-	5	248	0	6.73	17.5	306.6	0	-4,-7	-	-	10.36	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113686	ENSMUSP00000109316	TRANSLATION	protein_coding	-	-	5	251	0	6	3.9	290.7	0	-4,-7	-	-	5.002	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000030185	ENSMUSP00000030185	TRANSLATION	protein_coding	-	-	2	284	0	7.75	17.5	326.1	0	-4,-5	-	-	13.57	ALTERNATIVE:1
ENSMUSG00000032366	Tpm1	ENSMUST00000113695	ENSMUSP00000109325	TRANSLATION	protein_coding	-	CCDS52841.1	3	248	0	6.75	17.5	310.1	0	-4,-7	-	-	10.606	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113687	ENSMUSP00000109317	TRANSLATION	protein_coding	-	-	5	287	0	7	3.9	292.4	0	-4,-5	-	-	7.108	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000131279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032366	Tpm1	ENSMUST00000113696	ENSMUSP00000109326	TRANSLATION	protein_coding	-	CCDS52843.1	2	248	0	6.73	17.5	294.7	0	-4,-7	-	-	9.646	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113697	ENSMUSP00000109327	TRANSLATION	protein_coding	-	CCDS52846.1	2	284	0	7.73	17.5	299.1	0	-4,-5	-	-	11.908	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113707	ENSMUSP00000109337	TRANSLATION	protein_coding	-	CCDS23311.1	1	284	0	7.75	17.5	314.4	0	-4,-5	-	-	12.868	PRINCIPAL:3
ENSMUSG00000032366	Tpm1	ENSMUST00000050905	ENSMUSP00000051888	TRANSLATION	protein_coding	-	CCDS52847.1	1	284	0	7.73	19.5	310.5	0	-4,-5	-	-	13.024	ALTERNATIVE:1
ENSMUSG00000032366	Tpm1	ENSMUST00000113701	ENSMUSP00000109331	TRANSLATION	protein_coding	-	-	5	284	0	7.73	15	287.2	0	-4,-5	-	-	10.654	MINOR
ENSMUSG00000032366	Tpm1	ENSMUST00000113693	ENSMUSP00000109323	TRANSLATION	protein_coding	-	CCDS52844.1	5	281	0	7.6	12.8	303.5	0	-4,-5	-	-	10.898	MINOR
ENSMUSG00000036972	Zic4	ENSMUST00000170572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036972	Zic4	ENSMUST00000173933	ENSMUSP00000133958	TRANSLATION	protein_coding	-	CCDS23404.1	5	334	21	3.15	2.9	48.4	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000036972	Zic4	ENSMUST00000172858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036972	Zic4	ENSMUST00000085242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036972	Zic4	ENSMUST00000174611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036972	Zic4	ENSMUST00000173054	ENSMUSP00000134364	TRANSLATION	protein_coding	stop	-	2	181	6	1.35	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036972	Zic4	ENSMUST00000172646	ENSMUSP00000134053	TRANSLATION	protein_coding	-	CCDS23404.1	5	334	21	3.15	2.9	48.4	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000036972	Zic4	ENSMUST00000174802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036972	Zic4	ENSMUST00000172978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036972	Zic4	ENSMUST00000174212	ENSMUSP00000133808	TRANSLATION	protein_coding	stop	-	3	158	3	0.48	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036972	Zic4	ENSMUST00000066384	ENSMUSP00000069568	TRANSLATION	protein_coding	-	-	1	341	21	3.15	0.5	48.4	0	-3,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000036972	Zic4	ENSMUST00000173342	ENSMUSP00000133974	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025650	Col7a1	ENSMUST00000026740	ENSMUSP00000026740	TRANSLATION	protein_coding	-	CCDS40770.1	1	2944	5	41.07	1.5	962.2	0	2,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000025650	Col7a1	ENSMUST00000126780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025650	Col7a1	ENSMUST00000149142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025650	Col7a1	ENSMUST00000112070	ENSMUSP00000107701	TRANSLATION	protein_coding	-	CCDS40770.1	5	2944	5	41.07	1.5	962.2	0	2,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000025650	Col7a1	ENSMUST00000138588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025650	Col7a1	ENSMUST00000192424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025650	Col7a1	ENSMUST00000198997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025650	Col7a1	ENSMUST00000127905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032493	Prss44	ENSMUST00000196597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032493	Prss44	ENSMUST00000198815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032493	Prss44	ENSMUST00000098345	ENSMUSP00000095948	TRANSLATION	protein_coding	-	CCDS40782.1	1	372	6	3.7	1.5	219.3	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000032493	Prss44	ENSMUST00000141089	ENSMUSP00000117039	TRANSLATION	nonsense_mediated_decay	-	-	1	144	0	1	0	33.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000032119	Hinfp	ENSMUST00000217205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032119	Hinfp	ENSMUST00000215665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032119	Hinfp	ENSMUST00000217605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032119	Hinfp	ENSMUST00000216508	ENSMUSP00000149879	TRANSLATION	protein_coding	-	CCDS23102.1	1	503	40	4.19	0.5	65.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032119	Hinfp	ENSMUST00000214660	ENSMUSP00000150281	TRANSLATION	protein_coding	stop	-	5	95	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032119	Hinfp	ENSMUST00000034629	ENSMUSP00000034629	TRANSLATION	protein_coding	stop	-	1	404	40	4.19	0	65.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032119	Hinfp	ENSMUST00000215637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032119	Hinfp	ENSMUST00000217137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033392	Clasp2	ENSMUST00000213663	ENSMUSP00000150145	TRANSLATION	protein_coding	-	-	5	600	0	7.08	0	36.5	0	-4,-5	-	-	0.15	MINOR
ENSMUSG00000033392	Clasp2	ENSMUST00000216817	ENSMUSP00000150741	TRANSLATION	protein_coding	-	-	1	400	0	6.33	1.5	36.5	0	-4,-5	-	-	0.338	MINOR
ENSMUSG00000033392	Clasp2	ENSMUST00000166734	ENSMUSP00000130201	TRANSLATION	protein_coding	-	CCDS40787.1	5	1287	0	13.08	6.3	134	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000033392	Clasp2	ENSMUST00000111838	ENSMUSP00000107469	TRANSLATION	protein_coding	-	CCDS52948.1	1	1286	0	13.08	6.3	134	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000033392	Clasp2	ENSMUST00000213966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033392	Clasp2	ENSMUST00000214860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033392	Clasp2	ENSMUST00000215022	ENSMUSP00000149685	TRANSLATION	nonsense_mediated_decay	-	-	5	103	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033392	Clasp2	ENSMUST00000216280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033392	Clasp2	ENSMUST00000163895	ENSMUSP00000128460	TRANSLATION	protein_coding	-	-	5	1307	0	13.08	6.3	134	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000033392	Clasp2	ENSMUST00000213902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033392	Clasp2	ENSMUST00000214522	ENSMUSP00000149670	TRANSLATION	protein_coding	-	-	1	1304	0	13.08	3.9	134	0	-4,-5	-	-	13.094	ALTERNATIVE:2
ENSMUSG00000063350	Olfr874	ENSMUST00000216982	ENSMUSP00000150088	TRANSLATION	protein_coding	-	CCDS22986.1	5	310	0	0.2	8.8	165.4	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000063350	Olfr874	ENSMUST00000115004	ENSMUSP00000110656	TRANSLATION	protein_coding	-	CCDS22986.1	-	310	0	0.2	8.8	165.4	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000074062	Fbxw16	ENSMUST00000084984	ENSMUSP00000082051	TRANSLATION	protein_coding	-	CCDS40773.1	1	464	0	1.94	0.5	39.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074062	Fbxw16	ENSMUST00000196410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001348	Acp5	ENSMUST00000216684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001348	Acp5	ENSMUST00000069330	ENSMUSP00000065425	TRANSLATION	protein_coding	-	CCDS22923.1	1	327	9	4	3.9	78.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001348	Acp5	ENSMUST00000165735	ENSMUSP00000127128	TRANSLATION	protein_coding	-	CCDS22923.1	1	327	9	4	3.9	78.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001348	Acp5	ENSMUST00000217643	ENSMUSP00000150903	TRANSLATION	protein_coding	-	CCDS22923.1	5	327	9	4	3.9	78.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001348	Acp5	ENSMUST00000213815	ENSMUSP00000149597	TRANSLATION	protein_coding	-	CCDS22923.1	5	327	9	4	3.9	78.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001348	Acp5	ENSMUST00000115315	ENSMUSP00000110970	TRANSLATION	protein_coding	-	CCDS22923.1	2	327	9	4	3.9	78.1	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000032323	Cyp11a1	ENSMUST00000188539	ENSMUSP00000140777	TRANSLATION	protein_coding	stop	-	2	279	12	4.33	0	174.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032323	Cyp11a1	ENSMUST00000188116	ENSMUSP00000140545	TRANSLATION	protein_coding	stop	-	3	115	0	1.33	0	45.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032323	Cyp11a1	ENSMUST00000188944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032323	Cyp11a1	ENSMUST00000034874	ENSMUSP00000034874	TRANSLATION	protein_coding	-	CCDS40653.1	1	526	30	9.58	1.5	398.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047508	Mbd3l2	ENSMUST00000213777	ENSMUSP00000149130	TRANSLATION	protein_coding	-	CCDS22844.1	1	228	0	0	0.5	160.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000047508	Mbd3l2	ENSMUST00000051008	ENSMUSP00000054515	TRANSLATION	protein_coding	-	CCDS22844.1	1	228	0	0	0.5	160.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025893	Kbtbd3	ENSMUST00000212221	ENSMUSP00000148445	TRANSLATION	protein_coding	-	CCDS22795.1	1	607	0	0.8	3.9	227.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025893	Kbtbd3	ENSMUST00000049648	ENSMUSP00000050183	TRANSLATION	protein_coding	-	CCDS22795.1	1	607	0	0.8	3.9	227.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000091159	Gm17545	ENSMUST00000168332	ENSMUSP00000129499	TRANSLATION	protein_coding	start/stop	-	5	24	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036411	9530077C05Rik	ENSMUST00000214436	ENSMUSP00000149413	TRANSLATION	protein_coding	stop	-	5	203	1	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036411	9530077C05Rik	ENSMUST00000213598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036411	9530077C05Rik	ENSMUST00000058868	ENSMUSP00000062120	TRANSLATION	protein_coding	-	CCDS40563.1	1	519	3	0	1.7	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000036411	9530077C05Rik	ENSMUST00000213133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048534	Jaml	ENSMUST00000215266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048534	Jaml	ENSMUST00000216426	ENSMUSP00000150449	TRANSLATION	protein_coding	stop	-	3	167	0	3.5	0	51.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048534	Jaml	ENSMUST00000215880	ENSMUSP00000150697	TRANSLATION	protein_coding	-	CCDS23128.1	1	379	0	6.25	0.5	124.6	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000048534	Jaml	ENSMUST00000215098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048534	Jaml	ENSMUST00000216333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048534	Jaml	ENSMUST00000217074	ENSMUSP00000149913	TRANSLATION	protein_coding	start	-	3	113	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048534	Jaml	ENSMUST00000050020	ENSMUSP00000052033	TRANSLATION	protein_coding	-	CCDS23128.1	1	379	0	6.25	0.5	124.6	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000032554	Trf	ENSMUST00000035158	ENSMUSP00000035158	TRANSLATION	protein_coding	-	CCDS23451.1	1	697	23	16.924	1.5	811.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032554	Trf	ENSMUST00000168142	ENSMUSP00000128609	TRANSLATION	protein_coding	start/stop	-	3	249	14	5.774	0	225.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032554	Trf	ENSMUST00000164377	ENSMUSP00000128647	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	1.5	0	49.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032554	Trf	ENSMUST00000170904	ENSMUSP00000128390	TRANSLATION	protein_coding	start/stop	-	5	278	14	6.09	0	244.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032554	Trf	ENSMUST00000112645	ENSMUSP00000108264	TRANSLATION	protein_coding	-	CCDS23451.1	1	697	23	16.924	1.5	811.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032554	Trf	ENSMUST00000126359	ENSMUSP00000120472	TRANSLATION	protein_coding	stop	-	5	237	8	5.58	0	344	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032554	Trf	ENSMUST00000112503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032554	Trf	ENSMUST00000165296	ENSMUSP00000129013	TRANSLATION	protein_coding	stop	-	5	171	2	4.25	0	161.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032554	Trf	ENSMUST00000190051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034898	Filip1	ENSMUST00000172973	ENSMUSP00000134427	TRANSLATION	protein_coding	stop	-	1	225	0	0	0	180.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034898	Filip1	ENSMUST00000217264	ENSMUSP00000149142	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034898	Filip1	ENSMUST00000172740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034898	Filip1	ENSMUST00000093811	ENSMUSP00000091329	TRANSLATION	protein_coding	-	CCDS40704.1	1	1214	0	0	3.9	207.2	0	-4,-6	-	-	7	PRINCIPAL:2
ENSMUSG00000034898	Filip1	ENSMUST00000239133	ENSMUSP00000158921	TRANSLATION	protein_coding	-	-	-	1178	0	0	1.7	207.2	0	-4,-6	-	-	6.241	ALTERNATIVE:2
ENSMUSG00000031965	Tbx20	ENSMUST00000166018	ENSMUSP00000126318	TRANSLATION	protein_coding	-	CCDS52744.1	1	297	0	4.68	2.7	275.7	0	-4,-7	-	-	12.786	MINOR
ENSMUSG00000031965	Tbx20	ENSMUST00000216564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031965	Tbx20	ENSMUST00000052946	ENSMUSP00000052591	TRANSLATION	protein_coding	-	CCDS22933.1	1	445	0	4.68	7.5	275.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031965	Tbx20	ENSMUST00000217597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031965	Tbx20	ENSMUST00000215802	ENSMUSP00000149186	TRANSLATION	protein_coding	start	-	5	130	0	3.08	0	157.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000163329	ENSMUSP00000126019	TRANSLATION	protein_coding	-	CCDS23234.1	5	380	2	3.63	8.3	60.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000055720	Ubl7	ENSMUST00000215936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055720	Ubl7	ENSMUST00000214086	ENSMUSP00000149613	TRANSLATION	protein_coding	stop	-	3	70	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000217132	ENSMUSP00000149608	TRANSLATION	protein_coding	stop	-	5	238	2	2.63	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000216260	ENSMUSP00000149639	TRANSLATION	protein_coding	stop	-	3	129	2	2.63	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000217129	ENSMUSP00000150292	TRANSLATION	protein_coding	stop	-	3	157	2	2.63	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000215751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055720	Ubl7	ENSMUST00000216925	ENSMUSP00000150925	TRANSLATION	protein_coding	-	CCDS23234.1	1	380	2	3.63	8.3	60.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000055720	Ubl7	ENSMUST00000213654	ENSMUSP00000150631	TRANSLATION	protein_coding	stop	-	3	202	2	2.78	0	36.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000217180	ENSMUSP00000149390	TRANSLATION	nonsense_mediated_decay	-	-	3	110	1	2.33	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055720	Ubl7	ENSMUST00000215592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055720	Ubl7	ENSMUST00000216841	ENSMUSP00000149748	TRANSLATION	protein_coding	-	CCDS23234.1	5	380	2	3.63	8.3	60.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000032298	Neil1	ENSMUST00000190245	ENSMUSP00000139917	TRANSLATION	protein_coding	-	CCDS23217.1	1	389	4	7.43	5.1	148.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032298	Neil1	ENSMUST00000034842	ENSMUSP00000034842	TRANSLATION	protein_coding	-	CCDS23217.1	1	389	4	7.43	5.1	148.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032298	Neil1	ENSMUST00000186410	ENSMUSP00000141048	TRANSLATION	protein_coding	-	CCDS23217.1	1	389	4	7.43	5.1	148.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000013822	Elof1	ENSMUST00000213233	ENSMUSP00000150169	TRANSLATION	protein_coding	-	CCDS40559.1	3	83	4	2	17.5	110.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013822	Elof1	ENSMUST00000216837	ENSMUSP00000149885	TRANSLATION	protein_coding	-	CCDS40559.1	1	83	4	2	17.5	110.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013822	Elof1	ENSMUST00000166335	ENSMUSP00000128173	TRANSLATION	protein_coding	-	CCDS40559.1	1	83	4	2	17.5	110.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013822	Elof1	ENSMUST00000013966	ENSMUSP00000013966	TRANSLATION	protein_coding	-	CCDS40559.1	1	83	4	2	17.5	110.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013822	Elof1	ENSMUST00000214394	ENSMUSP00000150536	TRANSLATION	protein_coding	-	CCDS40559.1	2	83	4	2	17.5	110.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000044938	Klhl31	ENSMUST00000057781	ENSMUSP00000059643	TRANSLATION	protein_coding	-	CCDS23352.1	1	634	0	1	0.5	288.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034452	Slc24a1	ENSMUST00000037798	ENSMUSP00000035616	TRANSLATION	protein_coding	-	CCDS23283.1	1	1130	0	1.3	0.5	201.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038957	Edc3	ENSMUST00000137245	ENSMUSP00000123317	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	1	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038957	Edc3	ENSMUST00000043990	ENSMUSP00000049146	TRANSLATION	protein_coding	-	CCDS23231.1	1	508	0	5.53	10.8	318.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038957	Edc3	ENSMUST00000142807	ENSMUSP00000123505	TRANSLATION	protein_coding	stop	-	3	65	0	1.33	0	42.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098847	Gm27235	ENSMUST00000184431	ENSMUSP00000139380	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	83	0	0	0	0	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000074028	Slc22a13	ENSMUST00000084797	ENSMUSP00000081855	TRANSLATION	protein_coding	-	CCDS40802.1	1	551	0	4.24	1.5	136.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032425	Zfp949	ENSMUST00000161458	ENSMUSP00000125017	TRANSLATION	protein_coding	-	CCDS52880.1	1	603	47	1.4	1.5	246.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032425	Zfp949	ENSMUST00000161232	ENSMUSP00000125222	TRANSLATION	protein_coding	stop	-	2	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032425	Zfp949	ENSMUST00000162827	ENSMUSP00000125325	TRANSLATION	protein_coding	-	CCDS52880.1	1	603	47	1.4	1.5	246.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032425	Zfp949	ENSMUST00000162985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032425	Zfp949	ENSMUST00000160652	ENSMUSP00000124521	TRANSLATION	protein_coding	stop	-	3	47	0	1	0	73.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089929	Bcl2a1b	ENSMUST00000068569	ENSMUSP00000065612	TRANSLATION	protein_coding	-	CCDS23393.1	1	172	0	1.8	5.1	85.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053773	Rdh8	ENSMUST00000066387	ENSMUSP00000067662	TRANSLATION	protein_coding	-	CCDS22884.1	2	317	27	5	0.5	151.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000111497	Gm38431	ENSMUST00000217359	ENSMUSP00000151195	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	748	0	4.28	1.5	74.6	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000111497	Gm38431	ENSMUST00000217282	ENSMUSP00000149675	TRANSLATION	nonsense_mediated_decay,RT	start	-	2	488	0	1.2	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000003131	Pafah1b2	ENSMUST00000214179	ENSMUSP00000149819	TRANSLATION	protein_coding	-	CCDS23139.1	2	229	5	6.49	9.8	57.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003131	Pafah1b2	ENSMUST00000215060	ENSMUSP00000151196	TRANSLATION	protein_coding	stop	-	3	197	5	5.49	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003131	Pafah1b2	ENSMUST00000217514	ENSMUSP00000148931	TRANSLATION	protein_coding	stop	-	2	88	2	2.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003131	Pafah1b2	ENSMUST00000217636	ENSMUSP00000150013	TRANSLATION	protein_coding	stop	-	2	78	2	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003131	Pafah1b2	ENSMUST00000213853	ENSMUSP00000149204	TRANSLATION	protein_coding	stop	-	5	107	2	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003131	Pafah1b2	ENSMUST00000214996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003131	Pafah1b2	ENSMUST00000215427	ENSMUSP00000149409	TRANSLATION	protein_coding	stop	-	5	97	2	3.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003131	Pafah1b2	ENSMUST00000172450	ENSMUSP00000127851	TRANSLATION	protein_coding	-	CCDS23139.1	1	229	5	6.49	9.8	57.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003131	Pafah1b2	ENSMUST00000216334	ENSMUSP00000149998	TRANSLATION	protein_coding	stop	-	5	22	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096734	Gm21836	ENSMUST00000178787	ENSMUSP00000137150	TRANSLATION	protein_coding	start/stop	-	-	21	2	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000032400	Zwilch	ENSMUST00000177045	ENSMUSP00000135328	TRANSLATION	protein_coding	stop	-	1	303	0	7.74	0	306.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000148428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032400	Zwilch	ENSMUST00000143421	ENSMUSP00000135705	TRANSLATION	nonsense_mediated_decay	start	-	3	38	0	1	0	36	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000138075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032400	Zwilch	ENSMUST00000152824	ENSMUSP00000115556	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	1.33	0	68.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000151428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032400	Zwilch	ENSMUST00000176848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032400	Zwilch	ENSMUST00000122091	ENSMUSP00000112790	TRANSLATION	protein_coding	-	CCDS23275.2	1	596	0	16.48	0.5	665.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032400	Zwilch	ENSMUST00000130127	ENSMUSP00000116187	TRANSLATION	protein_coding	start/stop	-	3	154	0	3.585	0	79.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000176794	ENSMUSP00000134850	TRANSLATION	protein_coding	-	-	5	572	0	15.73	0	607.7	0	-4,-6	-	-	7.056	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000176299	ENSMUSP00000135585	TRANSLATION	protein_coding	-	-	5	475	0	12.9	3.6	593	0	-4,-7	-	-	2.674	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000124301	ENSMUSP00000134966	TRANSLATION	nonsense_mediated_decay	start	-	5	82	0	2.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032400	Zwilch	ENSMUST00000176378	ENSMUSP00000134782	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	2.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032091	Tmprss4	ENSMUST00000165263	ENSMUSP00000131890	TRANSLATION	nonsense_mediated_decay	-	-	5	335	11	3.66	0	177	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000032091	Tmprss4	ENSMUST00000163945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032091	Tmprss4	ENSMUST00000163237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032091	Tmprss4	ENSMUST00000034599	ENSMUSP00000034599	TRANSLATION	protein_coding	-	CCDS40607.1	1	435	15	5.66	5.1	293.9	1	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000032091	Tmprss4	ENSMUST00000170069	ENSMUSP00000131933	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038086	Hspb2	ENSMUST00000217159	ENSMUSP00000148970	TRANSLATION	protein_coding	-	-	1	88	0	1	1.5	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000038086	Hspb2	ENSMUST00000042790	ENSMUSP00000042374	TRANSLATION	protein_coding	-	CCDS23171.1	1	182	0	2	2.7	85.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039048	Foxred1	ENSMUST00000216618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039048	Foxred1	ENSMUST00000140177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039048	Foxred1	ENSMUST00000151658	ENSMUSP00000120284	TRANSLATION	nonsense_mediated_decay	-	-	1	140	9	0.76	0	31.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000138692	ENSMUSP00000120556	TRANSLATION	nonsense_mediated_decay	-	-	3	89	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000143039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039048	Foxred1	ENSMUST00000154691	ENSMUSP00000123496	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000151082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039048	Foxred1	ENSMUST00000139703	ENSMUSP00000122535	TRANSLATION	nonsense_mediated_decay	-	-	3	186	20	1.96	0	51.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000043805	ENSMUSP00000038924	TRANSLATION	protein_coding	-	CCDS22958.1	1	493	41	5.47	0.5	175.1	0	-4,-2	-	-	17.85	PRINCIPAL:3
ENSMUSG00000039048	Foxred1	ENSMUST00000135054	ENSMUSP00000115301	TRANSLATION	protein_coding	start	-	3	141	8	1.28	0	31.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000127996	ENSMUSP00000118037	TRANSLATION	protein_coding	-	CCDS80974.1	1	487	41	5.338	0.5	177.6	0	-4,-2	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000039048	Foxred1	ENSMUST00000142595	ENSMUSP00000117147	TRANSLATION	protein_coding	stop	-	3	205	20	1.96	0	51.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039048	Foxred1	ENSMUST00000130072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036091	Hyal3	ENSMUST00000040059	ENSMUSP00000042667	TRANSLATION	protein_coding	-	CCDS23499.1	1	412	0	2.83	1.5	424.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036091	Hyal3	ENSMUST00000148440	ENSMUSP00000119499	TRANSLATION	protein_coding	-	CCDS23499.1	5	412	0	2.83	1.5	424.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036091	Hyal3	ENSMUST00000149487	ENSMUSP00000117845	TRANSLATION	protein_coding	stop	-	5	328	0	1.75	0	334.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000045087	S1pr5	ENSMUST00000122088	ENSMUSP00000113843	TRANSLATION	protein_coding	-	CCDS22898.1	2	400	0	0.6	1.5	119.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032085	Tagln	ENSMUST00000216035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032085	Tagln	ENSMUST00000034590	ENSMUSP00000034590	TRANSLATION	protein_coding	-	CCDS23137.1	1	201	0	3.33	13	112.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000032085	Tagln	ENSMUST00000215509	ENSMUSP00000150408	TRANSLATION	protein_coding	stop	-	3	109	0	2	0	43.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032566	Nudt16l2	ENSMUST00000190661	ENSMUSP00000139516	TRANSLATION	protein_coding	-	-	1	169	9	2	0	0	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000032566	Nudt16l2	ENSMUST00000035180	ENSMUSP00000035180	TRANSLATION	protein_coding	-	CCDS23463.1	1	206	13	3	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000066442	Mthfs	ENSMUST00000118887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000149688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000085256	ENSMUSP00000082354	TRANSLATION	protein_coding	-	CCDS23394.1	1	203	8	3.75	6.3	205.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000066442	Mthfs	ENSMUST00000127438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000209568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000147644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000144930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000186009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000127868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000117314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066442	Mthfs	ENSMUST00000185894	ENSMUSP00000139738	TRANSLATION	protein_coding	start	-	5	60	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066442	Mthfs	ENSMUST00000118870	ENSMUSP00000112695	TRANSLATION	protein_coding	-	-	3	128	0	2.75	0	94.1	0	-4,0	-	-	4.002	MINOR
ENSMUSG00000066442	Mthfs	ENSMUST00000187362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032454	Rbp2	ENSMUST00000188779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032454	Rbp2	ENSMUST00000187905	ENSMUSP00000140630	TRANSLATION	protein_coding	-	CCDS23425.1	3	134	17	3.25	21.5	73.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032454	Rbp2	ENSMUST00000035029	ENSMUSP00000035029	TRANSLATION	protein_coding	-	CCDS23425.1	1	134	17	3.25	21.5	73.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032454	Rbp2	ENSMUST00000189446	ENSMUSP00000140676	TRANSLATION	protein_coding	-	CCDS23425.1	3	134	17	3.25	21.5	73.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032257	Ankk1	ENSMUST00000034792	ENSMUSP00000034792	TRANSLATION	protein_coding	-	CCDS40616.1	1	745	21	4.87	0.5	379	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032257	Ankk1	ENSMUST00000216227	ENSMUSP00000149708	TRANSLATION	protein_coding	start	-	2	94	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000150594	ENSMUSP00000117673	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000098477	ENSMUSP00000096077	TRANSLATION	protein_coding	-	CCDS23406.1	1	232	0	0	1.5	284.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000126606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000135182	ENSMUSP00000140686	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	72.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000185580	ENSMUSP00000139734	TRANSLATION	protein_coding	-	-	1	156	0	0	0	191.7	0	-4,-7	-	-	0.438	MINOR
ENSMUSG00000074139	1700057G04Rik	ENSMUST00000134712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020257	Wdr82	ENSMUST00000190564	ENSMUSP00000140029	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	1.044	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020257	Wdr82	ENSMUST00000216761	ENSMUSP00000151103	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0.6	0	27.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020257	Wdr82	ENSMUST00000191147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020257	Wdr82	ENSMUST00000217532	ENSMUSP00000149387	TRANSLATION	nonsense_mediated_decay	start	-	5	85	0	0.73	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020257	Wdr82	ENSMUST00000020490	ENSMUSP00000020490	TRANSLATION	protein_coding	-	CCDS40754.1	1	313	0	6.32	17.5	69.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020257	Wdr82	ENSMUST00000214444	ENSMUSP00000150926	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0.6	0	27.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037845	Fdxacb1	ENSMUST00000042391	ENSMUSP00000037082	TRANSLATION	protein_coding	-	CCDS23174.1	1	622	0	0.2	0.5	207.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037845	Fdxacb1	ENSMUST00000176619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037845	Fdxacb1	ENSMUST00000176335	ENSMUSP00000135658	TRANSLATION	protein_coding	-	-	1	420	0	0.2	0	63.5	0	-3,-6	-	-	6	MINOR
ENSMUSG00000037845	Fdxacb1	ENSMUST00000177384	ENSMUSP00000135579	TRANSLATION	protein_coding	stop	-	1	117	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000037845	Fdxacb1	ENSMUST00000176145	ENSMUSP00000135796	TRANSLATION	nonsense_mediated_decay	-	-	3	115	0	0	0	101.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095957	Olfr832	ENSMUST00000060601	ENSMUSP00000056724	TRANSLATION	protein_coding	-	CCDS22849.1	-	312	0	0.32	5.1	172.5	3	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095957	Olfr832	ENSMUST00000218385	ENSMUSP00000151834	TRANSLATION	protein_coding	-	CCDS22849.1	5	312	0	0.32	5.1	172.5	3	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049723	Mmp12	ENSMUST00000138220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049723	Mmp12	ENSMUST00000120655	ENSMUSP00000114129	TRANSLATION	protein_coding	-	CCDS85639.1	1	403	36	9.5	0.5	386.2	0	-4,-5	-	-	13.986	MINOR
ENSMUSG00000049723	Mmp12	ENSMUST00000005950	ENSMUSP00000005950	TRANSLATION	protein_coding	-	CCDS22804.1	1	473	36	10.35	0.5	424.8	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000049723	Mmp12	ENSMUST00000127722	ENSMUSP00000120225	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0.16	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000049723	Mmp12	ENSMUST00000150167	ENSMUSP00000116080	TRANSLATION	protein_coding	stop	-	5	72	3	1.75	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049723	Mmp12	ENSMUST00000148005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049723	Mmp12	ENSMUST00000065079	ENSMUSP00000065291	TRANSLATION	protein_coding	-	-	1	339	32	5.35	0	274.5	0	2,-3	-	-	3.336	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000154723	ENSMUSP00000116987	TRANSLATION	protein_coding	start/stop	-	5	309	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000148344	ENSMUSP00000121809	TRANSLATION	protein_coding	start	-	5	1131	12	2.08	0	55.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000134465	ENSMUSP00000117395	TRANSLATION	protein_coding	-	-	5	1324	12	4.33	2.7	55.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048537	Phldb1	ENSMUST00000123310	ENSMUSP00000122374	TRANSLATION	protein_coding	start/stop	-	2	262	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000156918	ENSMUSP00000120092	TRANSLATION	protein_coding	-	-	5	641	12	2.08	0	55.4	0	-4,-5	-	-	13.5	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000123003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048537	Phldb1	ENSMUST00000135436	ENSMUSP00000120023	TRANSLATION	protein_coding	-	-	1	495	12	2.08	0	55.4	0	-3,-5	-	-	13.5	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000144251	ENSMUSP00000114773	TRANSLATION	protein_coding	-	-	1	684	12	2.08	0.5	55.4	0	-4,-5	-	-	13.5	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000148929	ENSMUSP00000114533	TRANSLATION	protein_coding	stop	-	2	164	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000128326	ENSMUSP00000119966	TRANSLATION	protein_coding	start	-	5	832	12	2.08	0	55.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000147495	ENSMUSP00000122661	TRANSLATION	protein_coding	-	-	5	1382	12	4.165	2.7	51.8	0	-4,-5	-	-	17.28	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000034611	ENSMUSP00000034611	TRANSLATION	protein_coding	-	CCDS23118.1	1	1371	12	4.33	2.7	55.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000048537	Phldb1	ENSMUST00000133312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048537	Phldb1	ENSMUST00000126818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048537	Phldb1	ENSMUST00000123123	ENSMUSP00000122071	TRANSLATION	nonsense_mediated_decay	start	-	3	27	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000123406	ENSMUSP00000114257	TRANSLATION	protein_coding	stop	-	2	221	0	0.4	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000138356	ENSMUSP00000120208	TRANSLATION	protein_coding	-	-	5	1449	12	4.165	0.5	51.8	0	-4,-5	-	-	17.28	MINOR
ENSMUSG00000048537	Phldb1	ENSMUST00000129806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032328	Tmem30a	ENSMUST00000130419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032328	Tmem30a	ENSMUST00000153815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032328	Tmem30a	ENSMUST00000120690	ENSMUSP00000114042	TRANSLATION	protein_coding	-	-	5	328	0	0	2.2	290	2	-4,-5	-	-	4.746	MINOR
ENSMUSG00000032328	Tmem30a	ENSMUST00000034878	ENSMUSP00000034878	TRANSLATION	protein_coding	-	CCDS23367.1	1	364	0	0	3.9	317.8	2	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000018620	Mmp20	ENSMUST00000034487	ENSMUSP00000034487	TRANSLATION	protein_coding	-	CCDS22809.1	1	482	25	8.4	5.1	354.8	0	2,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000042787	Exog	ENSMUST00000214140	ENSMUSP00000149710	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	1.698	0	25.1	2	-4,0	-	-	-1	MINOR
ENSMUSG00000042787	Exog	ENSMUST00000215819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042787	Exog	ENSMUST00000035094	ENSMUSP00000035094	TRANSLATION	protein_coding	-	CCDS23616.1	1	368	3	5.33	5.1	210.5	2	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000042787	Exog	ENSMUST00000214462	ENSMUSP00000150704	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	2	-4,0	-	-	-1	MINOR
ENSMUSG00000042787	Exog	ENSMUST00000164213	ENSMUSP00000129273	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	2	-4,0	-	-	-1	MINOR
ENSMUSG00000066415	Msl2	ENSMUST00000189616	ENSMUSP00000139396	TRANSLATION	protein_coding	-	-	5	100	2	1	0	0	0	-4,-6	-	-	4.926	MINOR
ENSMUSG00000066415	Msl2	ENSMUST00000085177	ENSMUSP00000082270	TRANSLATION	protein_coding	-	CCDS85717.1	1	577	8	1.75	7.5	178.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000058692	Olfr846	ENSMUST00000214810	ENSMUSP00000150672	TRANSLATION	protein_coding	-	CCDS22855.1	5	312	0	0.42	1.5	182.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058692	Olfr846	ENSMUST00000078774	ENSMUSP00000077830	TRANSLATION	protein_coding	-	CCDS22855.1	-	312	0	0.42	1.5	182.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032407	U2surp	ENSMUST00000188017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032407	U2surp	ENSMUST00000185515	ENSMUSP00000140525	TRANSLATION	protein_coding	start/stop	-	2	204	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032407	U2surp	ENSMUST00000190019	ENSMUSP00000140331	TRANSLATION	protein_coding	start/stop	-	3	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032407	U2surp	ENSMUST00000079659	ENSMUSP00000078602	TRANSLATION	protein_coding	-	CCDS52889.1	1	1029	0	2.925	7.5	160.5	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000032407	U2surp	ENSMUST00000217176	ENSMUSP00000151121	TRANSLATION	protein_coding	-	-	5	1028	0	2.925	7.5	160.5	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000032407	U2surp	ENSMUST00000186139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032407	U2surp	ENSMUST00000186076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032407	U2surp	ENSMUST00000191213	ENSMUSP00000140614	TRANSLATION	nonsense_mediated_decay	-	-	5	425	0	1.275	0	56.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032407	U2surp	ENSMUST00000078374	ENSMUSP00000077482	TRANSLATION	protein_coding	-	CCDS40727.1	1	985	0	2.925	1.5	160.5	0	-4,-6	-	-	12.231	MINOR
ENSMUSG00000066705	Fxyd6	ENSMUST00000085939	ENSMUSP00000083101	TRANSLATION	protein_coding	-	CCDS23133.1	1	94	4	1.93	11	94.1	1	2,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000066705	Fxyd6	ENSMUST00000217381	ENSMUSP00000150813	TRANSLATION	protein_coding	-	-	1	93	4	1.93	11	94.1	1	1,-3	-	-	19	ALTERNATIVE:1
ENSMUSG00000066705	Fxyd6	ENSMUST00000215281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010047	Hyal2	ENSMUST00000195681	ENSMUSP00000141820	TRANSLATION	protein_coding	-	-	-	333	0	2.6	0	381.2	0	4,-1	-	-	4.176	MINOR
ENSMUSG00000010047	Hyal2	ENSMUST00000193747	ENSMUSP00000142141	TRANSLATION	protein_coding	-	-	1	347	0	3.6	0	424.5	0	4,-1	-	-	8.778	MINOR
ENSMUSG00000010047	Hyal2	ENSMUST00000194794	ENSMUSP00000142019	TRANSLATION	protein_coding	stop	-	3	154	0	1.6	0	167.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000010047	Hyal2	ENSMUST00000192887	ENSMUSP00000142207	TRANSLATION	protein_coding	stop	-	3	81	0	0	0	52.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000010047	Hyal2	ENSMUST00000195667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010047	Hyal2	ENSMUST00000195752	ENSMUSP00000141280	TRANSLATION	protein_coding	-	CCDS23496.1	5	473	0	4.24	1.5	456.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000010047	Hyal2	ENSMUST00000010191	ENSMUSP00000010191	TRANSLATION	protein_coding	-	CCDS23496.1	1	473	0	4.24	1.5	456.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000025794	Rpl14	ENSMUST00000213310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025794	Rpl14	ENSMUST00000215063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025794	Rpl14	ENSMUST00000216990	ENSMUSP00000150756	TRANSLATION	nonsense_mediated_decay	start	-	3	63	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025794	Rpl14	ENSMUST00000165532	ENSMUSP00000131489	TRANSLATION	protein_coding	-	CCDS40809.1	1	217	0	2.66	1.7	111.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025794	Rpl14	ENSMUST00000216628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070283	Ndufaf3	ENSMUST00000194381	ENSMUSP00000141291	TRANSLATION	protein_coding	start	-	3	75	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070283	Ndufaf3	ENSMUST00000074208	ENSMUSP00000073832	TRANSLATION	protein_coding	-	CCDS23531.1	1	185	0	2.51	3.9	113.4	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000070283	Ndufaf3	ENSMUST00000194666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070283	Ndufaf3	ENSMUST00000193242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032363	Adamts7	ENSMUST00000167122	ENSMUSP00000129292	TRANSLATION	protein_coding	-	-	5	1633	21	8.45	0	504.5	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000032363	Adamts7	ENSMUST00000124441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032363	Adamts7	ENSMUST00000134996	ENSMUSP00000119744	TRANSLATION	nonsense_mediated_decay	-	-	1	506	18	5.39	0	221	0	3,-2	-	-	-1	MINOR
ENSMUSG00000032363	Adamts7	ENSMUST00000113060	ENSMUSP00000108683	TRANSLATION	protein_coding	-	CCDS40724.1	1	1615	21	8.45	0.5	473.5	0	3,-2	-	-	16.14	MINOR
ENSMUSG00000032363	Adamts7	ENSMUST00000113059	ENSMUSP00000108682	TRANSLATION	protein_coding	-	CCDS85708.1	5	1657	21	8.45	0.5	504.5	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000032363	Adamts7	ENSMUST00000144943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032363	Adamts7	ENSMUST00000138227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032363	Adamts7	ENSMUST00000147250	ENSMUSP00000115972	TRANSLATION	protein_coding	-	CCDS81050.1	1	1556	21	8.45	0.5	473.5	0	3,-2	-	-	16.14	MINOR
ENSMUSG00000032527	Pccb	ENSMUST00000189498	ENSMUSP00000140354	TRANSLATION	protein_coding	stop	-	5	132	4	2.43	0	38.5	0	-2,1	-	-	-1	MINOR
ENSMUSG00000032527	Pccb	ENSMUST00000149998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032527	Pccb	ENSMUST00000142676	ENSMUSP00000123421	TRANSLATION	protein_coding	stop	-	5	256	21	5.93	0	256.4	0	-2,1	-	-	-1	MINOR
ENSMUSG00000032527	Pccb	ENSMUST00000035116	ENSMUSP00000035116	TRANSLATION	protein_coding	-	CCDS23442.1	1	541	28	13.28	1.7	649.8	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000032527	Pccb	ENSMUST00000149322	ENSMUSP00000118006	TRANSLATION	protein_coding	-	CCDS81063.1	1	504	24	12.28	0.5	447.4	0	-2,1	-	-	7.338	MINOR
ENSMUSG00000032527	Pccb	ENSMUST00000145091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041624	Gucy1a2	ENSMUST00000212705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041624	Gucy1a2	ENSMUST00000115733	ENSMUSP00000111398	TRANSLATION	protein_coding	-	CCDS40526.1	2	730	7	3.6	3.9	430.9	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000041624	Gucy1a2	ENSMUST00000213060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025235	Bbs4	ENSMUST00000214832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025235	Bbs4	ENSMUST00000217367	ENSMUSP00000150973	TRANSLATION	protein_coding	start	-	3	150	0	2.25	0	53.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025235	Bbs4	ENSMUST00000026265	ENSMUSP00000026265	TRANSLATION	protein_coding	-	CCDS40658.1	1	520	0	6.7	1.5	96.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025235	Bbs4	ENSMUST00000214225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046242	Nme9	ENSMUST00000163199	ENSMUSP00000150820	TRANSLATION	protein_coding	-	-	5	329	10	2.75	0	165.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046242	Nme9	ENSMUST00000056103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032872	Cyb5r4	ENSMUST00000174540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032872	Cyb5r4	ENSMUST00000174043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032872	Cyb5r4	ENSMUST00000168529	ENSMUSP00000126119	TRANSLATION	protein_coding	-	CCDS40716.2	1	528	17	7.54	0.5	266.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032872	Cyb5r4	ENSMUST00000174294	ENSMUSP00000133918	TRANSLATION	nonsense_mediated_decay	start	-	3	89	3	1.4	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032872	Cyb5r4	ENSMUST00000174724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032532	Cck	ENSMUST00000216176	ENSMUSP00000149163	TRANSLATION	protein_coding	start	-	3	42	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000032532	Cck	ENSMUST00000213106	ENSMUSP00000149410	TRANSLATION	protein_coding	stop	-	3	85	0	0	0	55.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032532	Cck	ENSMUST00000217581	ENSMUSP00000150557	TRANSLATION	nonsense_mediated_decay	start	-	5	68	0	0	0	37.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000032532	Cck	ENSMUST00000216138	ENSMUSP00000150080	TRANSLATION	protein_coding	-	-	1	134	0	0	0.5	43.8	0	4,-1	-	-	0.564	MINOR
ENSMUSG00000032532	Cck	ENSMUST00000215228	ENSMUSP00000149679	TRANSLATION	protein_coding	-	CCDS23631.1	1	115	0	0	5.1	134.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000032532	Cck	ENSMUST00000035120	ENSMUSP00000035120	TRANSLATION	protein_coding	-	CCDS23631.1	1	115	0	0	5.1	134.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000032096	Arcn1	ENSMUST00000217194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032096	Arcn1	ENSMUST00000034607	ENSMUSP00000034607	TRANSLATION	protein_coding	-	CCDS40602.1	1	511	0	8.75	12.8	148.1	0	-3,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000032096	Arcn1	ENSMUST00000125164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032096	Arcn1	ENSMUST00000217199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032096	Arcn1	ENSMUST00000150160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032096	Arcn1	ENSMUST00000215140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006673	Qrich1	ENSMUST00000006851	ENSMUSP00000006851	TRANSLATION	protein_coding	-	CCDS52927.1	1	777	0	0	5.1	206.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000006673	Qrich1	ENSMUST00000193258	ENSMUSP00000141267	TRANSLATION	protein_coding	-	-	2	603	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000112155	ENSMUSP00000107782	TRANSLATION	protein_coding	-	CCDS52927.1	1	777	0	0	5.1	206.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000006673	Qrich1	ENSMUST00000194385	ENSMUSP00000142211	TRANSLATION	protein_coding	-	-	2	259	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000192331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006673	Qrich1	ENSMUST00000192819	ENSMUSP00000142027	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000195513	ENSMUSP00000142025	TRANSLATION	protein_coding	stop	-	2	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000194387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006673	Qrich1	ENSMUST00000192932	ENSMUSP00000141215	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000195563	ENSMUSP00000141716	TRANSLATION	protein_coding	stop	-	2	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000193348	ENSMUSP00000141691	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006673	Qrich1	ENSMUST00000194743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006673	Qrich1	ENSMUST00000194139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006673	Qrich1	ENSMUST00000194741	ENSMUSP00000142233	TRANSLATION	protein_coding	stop	-	1	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032264	Zw10	ENSMUST00000213787	ENSMUSP00000150032	TRANSLATION	nonsense_mediated_decay	start	-	1	187	0	0	0	249.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032264	Zw10	ENSMUST00000215706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032264	Zw10	ENSMUST00000034803	ENSMUSP00000034803	TRANSLATION	protein_coding	-	CCDS23161.1	1	779	0	0	2.7	817.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025241	Fyco1	ENSMUST00000183700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025241	Fyco1	ENSMUST00000216136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025241	Fyco1	ENSMUST00000084715	ENSMUSP00000081764	TRANSLATION	protein_coding	-	CCDS40819.1	1	1437	8	4.85	0.5	86.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025241	Fyco1	ENSMUST00000184082	ENSMUSP00000139343	TRANSLATION	protein_coding	stop	-	1	866	0	2	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025241	Fyco1	ENSMUST00000167595	ENSMUSP00000133222	TRANSLATION	protein_coding	-	CCDS40819.1	5	1437	8	4.85	0.5	86.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059246	Foxb1	ENSMUST00000071281	ENSMUSP00000096197	TRANSLATION	protein_coding	-	CCDS40677.1	1	325	0	0.6	7.8	124.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032537	Ephb1	ENSMUST00000035129	ENSMUSP00000035129	TRANSLATION	protein_coding	-	CCDS40742.1	1	984	20	11.55	8.8	828.9	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000032537	Ephb1	ENSMUST00000215514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032537	Ephb1	ENSMUST00000217184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032537	Ephb1	ENSMUST00000217014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032537	Ephb1	ENSMUST00000085169	ENSMUSP00000082261	TRANSLATION	protein_coding	-	CCDS52901.1	1	943	19	10.55	0.5	744.1	1	3,-2	-	-	10.248	MINOR
ENSMUSG00000032537	Ephb1	ENSMUST00000149800	ENSMUSP00000139470	TRANSLATION	protein_coding	-	-	1	456	0	3.7	0	291.7	0	3,-2	-	-	0	MINOR
ENSMUSG00000094204	Gm21915	ENSMUST00000177787	ENSMUSP00000137378	TRANSLATION	protein_coding	-	-	-	133	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000032312	Csk	ENSMUST00000213943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032312	Csk	ENSMUST00000217314	ENSMUSP00000150984	TRANSLATION	protein_coding	-	CCDS23228.1	1	450	17	11.58	17.5	434.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032312	Csk	ENSMUST00000216934	ENSMUSP00000149308	TRANSLATION	protein_coding	stop	-	2	108	0	2.83	0	84.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032312	Csk	ENSMUST00000215958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032312	Csk	ENSMUST00000215396	ENSMUSP00000150590	TRANSLATION	protein_coding	-	CCDS23228.1	1	450	17	11.58	17.5	434.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032312	Csk	ENSMUST00000213660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032312	Csk	ENSMUST00000216979	ENSMUSP00000149143	TRANSLATION	protein_coding	stop	-	5	91	0	2.33	0	53.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032312	Csk	ENSMUST00000034863	ENSMUSP00000034863	TRANSLATION	protein_coding	-	CCDS23228.1	1	450	17	11.58	17.5	434.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032312	Csk	ENSMUST00000217128	ENSMUSP00000150240	TRANSLATION	protein_coding	stop	-	2	139	0	3.83	0	122.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032602	Slc25a20	ENSMUST00000035222	ENSMUSP00000035222	TRANSLATION	protein_coding	-	CCDS23535.1	1	301	7	5.42	11.7	240	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000032602	Slc25a20	ENSMUST00000195260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032602	Slc25a20	ENSMUST00000194088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032415	Ube2cbp	ENSMUST00000034986	ENSMUSP00000034986	TRANSLATION	protein_coding	-	CCDS40713.1	1	368	4	0	1.5	249.9	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000032415	Ube2cbp	ENSMUST00000121189	ENSMUSP00000113549	TRANSLATION	nonsense_mediated_decay	-	-	5	138	0	0	0	21.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000066829	Zfp810	ENSMUST00000217563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066829	Zfp810	ENSMUST00000086278	ENSMUSP00000083459	TRANSLATION	protein_coding	-	CCDS40562.1	1	461	43	1.6	1.5	222.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000066829	Zfp810	ENSMUST00000214499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066829	Zfp810	ENSMUST00000215202	ENSMUSP00000150816	TRANSLATION	protein_coding	-	-	3	80	0	1	0	87.9	0	-4,-7	-	-	3.75	MINOR
ENSMUSG00000032081	Apoc3	ENSMUST00000118649	ENSMUSP00000113058	TRANSLATION	protein_coding	-	CCDS23141.1	2	99	0	2.33	5.1	119	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000032081	Apoc3	ENSMUST00000145672	ENSMUSP00000115025	TRANSLATION	protein_coding	stop	-	5	53	0	1	0	44.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000032081	Apoc3	ENSMUST00000214729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032081	Apoc3	ENSMUST00000034586	ENSMUSP00000034586	TRANSLATION	protein_coding	-	CCDS23141.1	1	99	0	2.33	5.1	119	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000032081	Apoc3	ENSMUST00000121916	ENSMUSP00000113126	TRANSLATION	protein_coding	-	CCDS80989.1	2	137	0	2.33	0.5	119	0	-2,0	-	-	12	MINOR
ENSMUSG00000079355	Ackr4	ENSMUST00000219146	ENSMUSP00000152036	TRANSLATION	protein_coding	-	CCDS23459.1	5	350	0	0.64	7.5	168.2	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079355	Ackr4	ENSMUST00000076147	ENSMUSP00000075507	TRANSLATION	protein_coding	-	CCDS23459.1	1	350	0	0.64	7.5	168.2	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079355	Ackr4	ENSMUST00000050139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079355	Ackr4	ENSMUST00000188000	ENSMUSP00000140792	TRANSLATION	protein_coding	-	CCDS23459.1	1	350	0	0.64	7.5	168.2	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000066382	Iqcf5	ENSMUST00000085113	ENSMUSP00000082194	TRANSLATION	protein_coding	-	CCDS52912.1	1	148	0	0	1.5	45.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000032294	Pkm	ENSMUST00000215623	ENSMUSP00000150901	TRANSLATION	protein_coding	stop	-	3	155	16	4.25	0	137.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000217353	ENSMUSP00000149983	TRANSLATION	protein_coding	stop	-	3	176	16	5.25	0	169.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000213220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032294	Pkm	ENSMUST00000216620	ENSMUSP00000151199	TRANSLATION	protein_coding	stop	-	3	51	3	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000214571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032294	Pkm	ENSMUST00000034834	ENSMUSP00000034834	TRANSLATION	protein_coding	-	CCDS40659.1	1	531	55	12.58	6.3	690.6	0	-4,-6	-	-	20.445	PRINCIPAL:3
ENSMUSG00000032294	Pkm	ENSMUST00000217038	ENSMUSP00000150509	TRANSLATION	protein_coding	stop	-	3	184	16	5.58	0	184.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000216857	ENSMUSP00000150188	TRANSLATION	protein_coding	stop	-	1	102	14	2.75	0	83.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000215660	ENSMUSP00000149206	TRANSLATION	protein_coding	stop	-	3	187	16	5.58	0	189.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000213930	ENSMUSP00000150578	TRANSLATION	protein_coding	stop	-	3	232	17	6.58	0	253.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032294	Pkm	ENSMUST00000163694	ENSMUSP00000128770	TRANSLATION	protein_coding	-	CCDS57681.1	5	531	55	12.58	7.5	688.2	0	-4,-6	-	-	20.856	ALTERNATIVE:1
ENSMUSG00000094449	Olfr972	ENSMUST00000216167	ENSMUSP00000150498	TRANSLATION	protein_coding	-	CCDS23064.1	5	314	0	0.32	2.8	181.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094449	Olfr972	ENSMUST00000079767	ENSMUSP00000078700	TRANSLATION	protein_coding	-	CCDS23064.1	-	314	0	0.32	2.8	181.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094449	Olfr972	ENSMUST00000215303	ENSMUSP00000150389	TRANSLATION	protein_coding	-	CCDS23064.1	2	314	0	0.32	2.8	181.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000189707	ENSMUSP00000140915	TRANSLATION	protein_coding	start/stop	-	2	129	6	3.66	0	41.8	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000188509	ENSMUSP00000140113	TRANSLATION	protein_coding	stop	-	1	115	0	0.8	0	0	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000187126	ENSMUSP00000139691	TRANSLATION	protein_coding	start	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000180233	ENSMUSP00000137530	TRANSLATION	protein_coding	start/stop	-	2	141	3	3.5	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000216394	ENSMUSP00000150071	TRANSLATION	protein_coding	start	-	1	85	6	2	0	41.8	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000180270	ENSMUSP00000136995	TRANSLATION	protein_coding	stop	-	1	150	0	0.8	0	0	0	-4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000217354	ENSMUSP00000149673	TRANSLATION	protein_coding	start	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093803	Ppp2r3d	ENSMUST00000216876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063849	Ppcdc	ENSMUST00000214519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063849	Ppcdc	ENSMUST00000214065	ENSMUSP00000148870	TRANSLATION	protein_coding	stop	-	5	133	10	4.16	0	116.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000216365	ENSMUSP00000149389	TRANSLATION	nonsense_mediated_decay	-	-	1	125	10	3.66	0	108.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000217255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063849	Ppcdc	ENSMUST00000214144	ENSMUSP00000150210	TRANSLATION	protein_coding	-	-	1	146	14	3.8984	0.5	111.1	0	-4,-7	-	-	10.224	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000215883	ENSMUSP00000150577	TRANSLATION	protein_coding	stop	-	3	62	4	1.83	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000213479	ENSMUSP00000148917	TRANSLATION	nonsense_mediated_decay	-	-	1	48	4	1.33	0	63	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000214624	ENSMUSP00000150738	TRANSLATION	protein_coding	-	-	1	48	4	1.33	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000213194	ENSMUSP00000149653	TRANSLATION	nonsense_mediated_decay	-	-	3	36	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000085709	ENSMUSP00000082856	TRANSLATION	protein_coding	-	CCDS23221.1	1	204	13	5.91	3.9	173.6	0	-4,-7	-	-	18.334	PRINCIPAL:1
ENSMUSG00000063849	Ppcdc	ENSMUST00000214166	ENSMUSP00000149381	TRANSLATION	protein_coding	stop	-	3	52	4	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000215299	ENSMUSP00000150385	TRANSLATION	protein_coding	stop	-	2	80	8	2.33	0	49.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000215961	ENSMUSP00000150007	TRANSLATION	protein_coding	start	-	2	142	14	3.8984	0	111.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063849	Ppcdc	ENSMUST00000214339	ENSMUSP00000149007	TRANSLATION	protein_coding	-	-	2	46	4	1.33	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032089	Il10ra	ENSMUST00000176808	ENSMUSP00000135361	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000032089	Il10ra	ENSMUST00000176222	ENSMUSP00000135461	TRANSLATION	protein_coding	-	CCDS85671.1	1	573	0	4	0.5	88.4	1	-1,-4	-	-	11.718	MINOR
ENSMUSG00000032089	Il10ra	ENSMUST00000034594	ENSMUSP00000034594	TRANSLATION	protein_coding	-	CCDS23131.1	1	575	0	4	0.5	92.8	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000001833	Septin7	ENSMUST00000213435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001833	Septin7	ENSMUST00000215721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001833	Septin7	ENSMUST00000214520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001833	Septin7	ENSMUST00000215692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001833	Septin7	ENSMUST00000217598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001833	Septin7	ENSMUST00000115272	ENSMUSP00000110927	TRANSLATION	protein_coding	-	-	5	437	16	11	6.3	411.8	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000001833	Septin7	ENSMUST00000214360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001833	Septin7	ENSMUST00000213980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001833	Septin7	ENSMUST00000165594	ENSMUSP00000127641	TRANSLATION	protein_coding	-	CCDS40565.1	5	437	16	11	6.3	411.8	0	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000001833	Septin7	ENSMUST00000214911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040661	Rad54l2	ENSMUST00000191300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040661	Rad54l2	ENSMUST00000189553	ENSMUSP00000139803	TRANSLATION	protein_coding	start	-	5	190	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040661	Rad54l2	ENSMUST00000190363	ENSMUSP00000139687	TRANSLATION	protein_coding	start	-	2	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040661	Rad54l2	ENSMUST00000046502	ENSMUSP00000045454	TRANSLATION	protein_coding	-	CCDS40759.1	1	1467	3	4.92	5.3	218.1	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000032251	Irak1bp1	ENSMUST00000034783	ENSMUSP00000034783	TRANSLATION	protein_coding	-	CCDS52871.1	1	237	0	0	1.7	63.5	0	-4,-6	-	-	4.8	MINOR
ENSMUSG00000032251	Irak1bp1	ENSMUST00000113245	ENSMUSP00000108871	TRANSLATION	protein_coding	-	CCDS23372.1	1	259	0	0	5.1	85.5	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000032109	Nlrx1	ENSMUST00000169651	ENSMUSP00000126555	TRANSLATION	protein_coding	-	CCDS23100.1	1	975	5	5.03	6.5	87.8	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000032109	Nlrx1	ENSMUST00000213764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032109	Nlrx1	ENSMUST00000034621	ENSMUSP00000034621	TRANSLATION	protein_coding	-	CCDS23100.1	1	975	5	5.03	6.5	87.8	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000032109	Nlrx1	ENSMUST00000168499	ENSMUSP00000127531	TRANSLATION	protein_coding	-	CCDS23100.1	1	975	5	5.03	6.5	87.8	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000032109	Nlrx1	ENSMUST00000213803	ENSMUSP00000150198	TRANSLATION	protein_coding	stop	-	2	155	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032109	Nlrx1	ENSMUST00000217465	ENSMUSP00000149124	TRANSLATION	protein_coding	stop	-	3	172	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000032279	Idh3a	ENSMUST00000217484	ENSMUSP00000150296	TRANSLATION	protein_coding	-	-	1	384	28	8	0	380.2	0	-2,1	-	-	18	MINOR
ENSMUSG00000032279	Idh3a	ENSMUST00000167866	ENSMUSP00000127526	TRANSLATION	protein_coding	-	CCDS23191.1	1	366	28	8	14.8	380.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000032279	Idh3a	ENSMUST00000213729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032279	Idh3a	ENSMUST00000214136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032279	Idh3a	ENSMUST00000215273	ENSMUSP00000149036	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049010	Olfr982	ENSMUST00000054051	ENSMUSP00000052705	TRANSLATION	protein_coding	-	CCDS23073.1	-	321	0	0.2	0.5	162.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036466	Megf11	ENSMUST00000164113	ENSMUSP00000128672	TRANSLATION	protein_coding	-	CCDS52833.1	5	1095	17	7.54	2.9	206	2	4,-1	-	-	14.475	MINOR
ENSMUSG00000036466	Megf11	ENSMUST00000144383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036466	Megf11	ENSMUST00000153934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036466	Megf11	ENSMUST00000148449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036466	Megf11	ENSMUST00000124881	ENSMUSP00000120514	TRANSLATION	protein_coding	start/stop	-	3	257	10	3.6	0	82.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036466	Megf11	ENSMUST00000068967	ENSMUSP00000065353	TRANSLATION	protein_coding	-	-	2	1091	20	7.86	7	236.6	2	4,-1	-	-	21	PRINCIPAL:5
ENSMUSG00000036466	Megf11	ENSMUST00000118485	ENSMUSP00000114035	TRANSLATION	protein_coding	-	-	5	1042	20	7.86	5.3	236.6	2	4,-1	-	-	20.151	ALTERNATIVE:1
ENSMUSG00000036466	Megf11	ENSMUST00000147388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036466	Megf11	ENSMUST00000093829	ENSMUSP00000091349	TRANSLATION	protein_coding	-	CCDS23281.1	1	947	17	7.54	0.5	206	2	4,-1	-	-	13.524	MINOR
ENSMUSG00000036466	Megf11	ENSMUST00000148963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000088	Cox5a	ENSMUST00000214154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000088	Cox5a	ENSMUST00000000090	ENSMUSP00000000090	TRANSLATION	protein_coding	-	CCDS23223.1	1	146	0	3.5	3.9	159.4	0	-3,1	-	-	13	PRINCIPAL:1
ENSMUSG00000000088	Cox5a	ENSMUST00000213678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032040	Dcps	ENSMUST00000034539	ENSMUSP00000034539	TRANSLATION	protein_coding	-	CCDS22957.1	1	338	6	7.41	7.5	182	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032040	Dcps	ENSMUST00000155139	ENSMUSP00000121041	TRANSLATION	nonsense_mediated_decay	-	-	2	102	0	1.75	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032040	Dcps	ENSMUST00000119847	ENSMUSP00000113284	TRANSLATION	protein_coding	-	-	1	291	0	6.41	0	131.9	0	-4,-5	-	-	6.996	MINOR
ENSMUSG00000040675	Mthfd1l	ENSMUST00000117291	ENSMUSP00000112870	TRANSLATION	protein_coding	-	CCDS56672.1	1	977	17	18.11	1.5	1017.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000040675	Mthfd1l	ENSMUST00000043735	ENSMUSP00000036178	TRANSLATION	protein_coding	-	CCDS56672.1	1	977	17	18.11	1.5	1017.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000040675	Mthfd1l	ENSMUST00000120585	ENSMUSP00000112897	TRANSLATION	protein_coding	-	CCDS56672.1	1	977	17	18.11	1.5	1017.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000040675	Mthfd1l	ENSMUST00000154517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013858	Tmem259	ENSMUST00000052885	ENSMUSP00000056792	TRANSLATION	protein_coding	-	CCDS24002.1	1	574	0	0	1.5	561.8	2	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013858	Tmem259	ENSMUST00000132080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013858	Tmem259	ENSMUST00000124536	ENSMUSP00000119572	TRANSLATION	protein_coding	start	-	1	568	0	0	0	536.4	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000013858	Tmem259	ENSMUST00000124889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013858	Tmem259	ENSMUST00000126383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020227	Irak3	ENSMUST00000143100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020227	Irak3	ENSMUST00000020448	ENSMUSP00000020448	TRANSLATION	protein_coding	-	CCDS24204.1	1	609	0	6.97	1.5	174.6	0	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020227	Irak3	ENSMUST00000145665	ENSMUSP00000118038	TRANSLATION	protein_coding	-	-	1	517	0	6.01	1	123.7	0	-4,-7	-	-	7.026	MINOR
ENSMUSG00000020227	Irak3	ENSMUST00000140237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020227	Irak3	ENSMUST00000135106	ENSMUSP00000123604	TRANSLATION	nonsense_mediated_decay	-	-	1	309	0	4.97	0	112.7	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000019777	Hdac2	ENSMUST00000123010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019777	Hdac2	ENSMUST00000105510	ENSMUSP00000101149	TRANSLATION	protein_coding	-	-	1	304	3	7.4	0	252.9	0	-4,-5	-	-	7.296	MINOR
ENSMUSG00000019777	Hdac2	ENSMUST00000019911	ENSMUSP00000019911	TRANSLATION	protein_coding	-	CCDS23783.1	1	488	3	11.25	16.6	281.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000019777	Hdac2	ENSMUST00000128031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091779	Gm21293	ENSMUST00000170919	ENSMUSP00000127137	TRANSLATION	protein_coding	-	-	5	266	0	0.8	0.5	68.9	0	-4,-5	-	-	10.404	MINOR
ENSMUSG00000091779	Gm21293	ENSMUST00000180664	ENSMUSP00000138043	TRANSLATION	protein_coding	-	-	3	261	0	0.8	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091779	Gm21293	ENSMUST00000181634	ENSMUSP00000137742	TRANSLATION	protein_coding	-	-	2	261	0	0.8	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047868	Olfr770	ENSMUST00000204250	ENSMUSP00000144892	TRANSLATION	protein_coding	-	CCDS24307.1	5	311	0	0.36	2.7	148	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047868	Olfr770	ENSMUST00000204712	ENSMUSP00000144960	TRANSLATION	protein_coding	-	CCDS24307.1	5	311	0	0.36	2.7	148	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047868	Olfr770	ENSMUST00000203887	ENSMUSP00000144950	TRANSLATION	protein_coding	-	CCDS24307.1	3	311	0	0.36	2.7	148	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047868	Olfr770	ENSMUST00000062314	ENSMUSP00000055193	TRANSLATION	protein_coding	-	CCDS24307.1	-	311	0	0.36	2.7	148	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046841	Ckap4	ENSMUST00000167671	ENSMUSP00000130304	TRANSLATION	protein_coding	-	CCDS24080.1	1	575	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000046841	Ckap4	ENSMUST00000053871	ENSMUSP00000050336	TRANSLATION	protein_coding	-	CCDS24080.1	1	575	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000038528	Mfsd4b5	ENSMUST00000045524	ENSMUSP00000040341	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000038528	Mfsd4b5	ENSMUST00000170579	ENSMUSP00000126439	TRANSLATION	protein_coding	-	CCDS48542.1	2	479	0	0	0.5	49.6	19	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038528	Mfsd4b5	ENSMUST00000170505	ENSMUSP00000131497	TRANSLATION	protein_coding	start	-	3	118	0	0	0	0	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000038528	Mfsd4b5	ENSMUST00000073618	ENSMUSP00000073304	TRANSLATION	protein_coding	-	CCDS48541.1	1	156	0	0	0.5	0	11	-4,-6	-	-	0	MINOR
ENSMUSG00000038528	Mfsd4b5	ENSMUST00000164566	ENSMUSP00000130944	TRANSLATION	protein_coding	-	CCDS23791.1	1	151	0	0	0.5	0	11	-4,-6	-	-	0	MINOR
ENSMUSG00000020056	Washc3	ENSMUST00000182619	ENSMUSP00000138310	TRANSLATION	protein_coding	start	-	5	171	0	0	0	117.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020056	Washc3	ENSMUST00000182359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020056	Washc3	ENSMUST00000020248	ENSMUSP00000020248	TRANSLATION	protein_coding	-	CCDS24108.1	1	194	0	0	0.5	163.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020056	Washc3	ENSMUST00000171151	ENSMUSP00000132246	TRANSLATION	protein_coding	-	CCDS48664.1	1	179	0	0	0.5	118.7	0	-4,-5	-	-	3.288	MINOR
ENSMUSG00000020056	Washc3	ENSMUST00000182211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020056	Washc3	ENSMUST00000182351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020056	Washc3	ENSMUST00000182183	ENSMUSP00000138540	TRANSLATION	protein_coding	-	CCDS59550.1	2	193	0	0	0.5	162	0	-4,-5	-	-	5.886	ALTERNATIVE:2
ENSMUSG00000020056	Washc3	ENSMUST00000182299	ENSMUSP00000138261	TRANSLATION	nonsense_mediated_decay	-	-	3	50	0	0	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092162	Vmn2r86	ENSMUST00000170257	ENSMUSP00000126596	TRANSLATION	protein_coding	-	CCDS48737.1	5	848	3	2.68	0.5	381.2	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000001120	Pcbp3	ENSMUST00000173854	ENSMUSP00000134144	TRANSLATION	protein_coding	start	-	3	161	0	2.061	0	68.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001120	Pcbp3	ENSMUST00000168465	ENSMUSP00000129465	TRANSLATION	protein_coding	-	CCDS35946.2	5	371	0	6.471	6.5	198.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000001120	Pcbp3	ENSMUST00000001148	ENSMUSP00000001148	TRANSLATION	protein_coding	-	CCDS35946.2	1	371	0	6.471	6.5	198.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000001120	Pcbp3	ENSMUST00000168505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001120	Pcbp3	ENSMUST00000092393	ENSMUSP00000090048	TRANSLATION	nonsense_mediated_decay	-	-	5	226	0	4.74	2.5	130.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001120	Pcbp3	ENSMUST00000165571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001120	Pcbp3	ENSMUST00000171437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001120	Pcbp3	ENSMUST00000105411	ENSMUSP00000101051	TRANSLATION	protein_coding	-	CCDS83716.1	1	370	0	6.471	6.5	198.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000001120	Pcbp3	ENSMUST00000168240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112743	Gm49358	ENSMUST00000218802	ENSMUSP00000151537	TRANSLATION	protein_coding,RT	start/stop	-	1	418	9	5.76	0	448.2	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000047638	Nr1h4	ENSMUST00000105297	ENSMUSP00000100934	TRANSLATION	protein_coding	-	CCDS48669.1	1	474	8	6.8	1.5	187	0	-4,-5	-	-	18.222	MINOR
ENSMUSG00000047638	Nr1h4	ENSMUST00000105296	ENSMUSP00000100933	TRANSLATION	protein_coding	-	CCDS48668.1	1	488	8	6.8	6.6	187	0	-4,-6	-	-	20.472	ALTERNATIVE:1
ENSMUSG00000047638	Nr1h4	ENSMUST00000058126	ENSMUSP00000053092	TRANSLATION	protein_coding	-	CCDS24116.1	1	484	8	6.8	7.8	187	0	-4,-6	-	-	21	PRINCIPAL:3
ENSMUSG00000019970	Sgk1	ENSMUST00000143094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019970	Sgk1	ENSMUST00000135195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019970	Sgk1	ENSMUST00000120509	ENSMUSP00000114074	TRANSLATION	protein_coding	-	CCDS48515.1	1	524	20	10.33	10.8	263.2	0	-4,-7	-	-	19.578	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000124203	ENSMUSP00000116096	TRANSLATION	protein_coding	start/stop	-	3	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000126560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019970	Sgk1	ENSMUST00000150089	ENSMUSP00000115073	TRANSLATION	protein_coding	stop	-	2	89	0	2.65	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000020145	ENSMUSP00000020145	TRANSLATION	protein_coding	-	CCDS23726.1	1	431	20	10.33	17.5	263.2	0	-4,-1	-	-	21.202	PRINCIPAL:1
ENSMUSG00000019970	Sgk1	ENSMUST00000141218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019970	Sgk1	ENSMUST00000142174	ENSMUSP00000120882	TRANSLATION	protein_coding	stop	-	3	82	3	2.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000092673	ENSMUSP00000090343	TRANSLATION	protein_coding	-	CCDS48517.1	1	445	20	10.33	7.6	263.2	0	-4,-1	-	-	18.802	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000100036	ENSMUSP00000097614	TRANSLATION	protein_coding	-	CCDS48516.1	5	417	20	10.73	8.9	263.2	0	-4,-6	-	-	19.916	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000124350	ENSMUSP00000114691	TRANSLATION	protein_coding	stop	-	3	266	20	7.33	0	207.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019970	Sgk1	ENSMUST00000164659	ENSMUSP00000128873	TRANSLATION	protein_coding	-	CCDS48518.1	5	404	20	10.33	2.5	263.2	0	-4,-7	-	-	17.566	MINOR
ENSMUSG00000034707	Gns	ENSMUST00000219505	ENSMUSP00000152016	TRANSLATION	nonsense_mediated_decay	start	-	3	165	1	2.3	0	63.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034707	Gns	ENSMUST00000217712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034707	Gns	ENSMUST00000219249	ENSMUSP00000151434	TRANSLATION	nonsense_mediated_decay	-	-	3	91	2	0.72	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000034707	Gns	ENSMUST00000219847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034707	Gns	ENSMUST00000219851	ENSMUSP00000151684	TRANSLATION	nonsense_mediated_decay	-	-	5	99	2	0.42	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000034707	Gns	ENSMUST00000220350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034707	Gns	ENSMUST00000219580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034707	Gns	ENSMUST00000040344	ENSMUSP00000043167	TRANSLATION	protein_coding	-	CCDS24210.1	1	544	5	7.98	1.5	238.3	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000034707	Gns	ENSMUST00000219216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034707	Gns	ENSMUST00000219531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019794	Katna1	ENSMUST00000173511	ENSMUSP00000134254	TRANSLATION	protein_coding	start	-	5	54	3	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019794	Katna1	ENSMUST00000019929	ENSMUSP00000019929	TRANSLATION	protein_coding	-	-	1	491	13	8.58	8.8	168.1	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000019794	Katna1	ENSMUST00000172400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019794	Katna1	ENSMUST00000174007	ENSMUSP00000133321	TRANSLATION	protein_coding	start	-	5	66	0	1.2	0	35.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019794	Katna1	ENSMUST00000165806	ENSMUSP00000132514	TRANSLATION	protein_coding	-	CCDS23689.2	1	493	13	8.58	8.8	168.1	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000019794	Katna1	ENSMUST00000173400	ENSMUSP00000133588	TRANSLATION	nonsense_mediated_decay	-	-	5	130	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040249	Lrp1	ENSMUST00000129727	ENSMUSP00000120567	TRANSLATION	nonsense_mediated_decay	start	-	3	13	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040249	Lrp1	ENSMUST00000135188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040249	Lrp1	ENSMUST00000125480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040249	Lrp1	ENSMUST00000133620	ENSMUSP00000115305	TRANSLATION	protein_coding	start/stop	-	5	98	14	2.1	0	103.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040249	Lrp1	ENSMUST00000129877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040249	Lrp1	ENSMUST00000121829	ENSMUSP00000113584	TRANSLATION	protein_coding	-	-	1	743	21	8.806	0	206	0	3,-2	-	-	0	MINOR
ENSMUSG00000040249	Lrp1	ENSMUST00000049149	ENSMUSP00000044004	TRANSLATION	protein_coding	-	CCDS24245.1	1	4545	155	39.74	1.5	1931.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040249	Lrp1	ENSMUST00000118455	ENSMUSP00000113497	TRANSLATION	protein_coding	-	-	5	285	21	3.84	0	153.6	0	3,-2	-	-	0	MINOR
ENSMUSG00000040249	Lrp1	ENSMUST00000145947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040249	Lrp1	ENSMUST00000140269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033318	Gstt2	ENSMUST00000218646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033318	Gstt2	ENSMUST00000219343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033318	Gstt2	ENSMUST00000038257	ENSMUSP00000046324	TRANSLATION	protein_coding	-	CCDS48601.1	1	244	13	5.25	3.9	79.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000033318	Gstt2	ENSMUST00000218034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033318	Gstt2	ENSMUST00000220440	ENSMUSP00000151239	TRANSLATION	protein_coding	-	CCDS48601.1	5	244	13	5.25	3.9	79.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000033318	Gstt2	ENSMUST00000218745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033318	Gstt2	ENSMUST00000218500	ENSMUSP00000151307	TRANSLATION	protein_coding	-	-	5	170	13	3.44	0	43.9	0	-4,-5	-	-	11.712	MINOR
ENSMUSG00000033318	Gstt2	ENSMUST00000220195	ENSMUSP00000151701	TRANSLATION	protein_coding	stop	-	5	182	13	4.58	0	31.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075327	Zbtb2	ENSMUST00000100078	ENSMUSP00000097656	TRANSLATION	protein_coding	-	CCDS56674.1	1	514	14	1.12	7.5	124.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000075327	Zbtb2	ENSMUST00000100077	ENSMUSP00000097655	TRANSLATION	protein_coding	-	CCDS56674.1	1	514	14	1.12	7.5	124.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000075327	Zbtb2	ENSMUST00000215860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059554	Ccdc28a	ENSMUST00000173243	ENSMUSP00000133585	TRANSLATION	protein_coding	-	-	5	130	0	0	0	106.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000059554	Ccdc28a	ENSMUST00000052648	ENSMUSP00000050107	TRANSLATION	protein_coding	-	-	1	192	0	0	1	92.9	0	-4,-7	-	-	5.16	MINOR
ENSMUSG00000059554	Ccdc28a	ENSMUST00000080860	ENSMUSP00000079671	TRANSLATION	protein_coding	-	CCDS35852.1	1	184	0	0	10.9	106.9	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000059554	Ccdc28a	ENSMUST00000174592	ENSMUSP00000134307	TRANSLATION	protein_coding	-	-	5	137	0	0	0	106.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000059554	Ccdc28a	ENSMUST00000174631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059554	Ccdc28a	ENSMUST00000173962	ENSMUSP00000133848	TRANSLATION	protein_coding	start	-	5	68	0	0	0	37.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019929	Dcn	ENSMUST00000163448	ENSMUSP00000131431	TRANSLATION	protein_coding	-	CCDS24141.1	1	354	0	7	0.5	188.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000019929	Dcn	ENSMUST00000105287	ENSMUSP00000100924	TRANSLATION	protein_coding	-	CCDS24141.1	1	354	0	7	0.5	188.2	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000019929	Dcn	ENSMUST00000218853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019929	Dcn	ENSMUST00000219539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019929	Dcn	ENSMUST00000219784	ENSMUSP00000151241	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000020032	Nuak1	ENSMUST00000020220	ENSMUSP00000020220	TRANSLATION	protein_coding	-	CCDS24079.1	1	658	20	6.15	0.5	256.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020032	Nuak1	ENSMUST00000129355	ENSMUSP00000122927	TRANSLATION	protein_coding	start/stop	-	3	160	4	4.05	0	126.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000053684	BC048403	ENSMUST00000065600	ENSMUSP00000070834	TRANSLATION	protein_coding	-	CCDS24213.1	1	445	0	2.6	14.8	825	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000053684	BC048403	ENSMUST00000136432	ENSMUSP00000117249	TRANSLATION	protein_coding	-	-	1	309	0	2	0.5	597.5	0	-4,-5	-	-	4.614	MINOR
ENSMUSG00000053684	BC048403	ENSMUST00000138630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032788	Pdxk	ENSMUST00000041616	ENSMUSP00000038540	TRANSLATION	protein_coding	-	CCDS23965.1	1	312	10	8.5	5.1	31.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000032788	Pdxk	ENSMUST00000218245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001435	Col18a1	ENSMUST00000105409	ENSMUSP00000101049	TRANSLATION	protein_coding	-	CCDS48604.1	1	1527	4	17.3436	0.5	876.8	0	3,-2	-	-	11.608	MINOR
ENSMUSG00000001435	Col18a1	ENSMUST00000218407	ENSMUSP00000151291	TRANSLATION	protein_coding	start/stop	-	3	225	0	1.6	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001435	Col18a1	ENSMUST00000156009	ENSMUSP00000122580	TRANSLATION	protein_coding	stop	-	3	161	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001435	Col18a1	ENSMUST00000081654	ENSMUSP00000080358	TRANSLATION	protein_coding	-	CCDS23953.1	1	1315	4	17.3436	0.5	541.5	0	4,-1	-	-	9.598	MINOR
ENSMUSG00000001435	Col18a1	ENSMUST00000072755	ENSMUSP00000072538	TRANSLATION	protein_coding	-	-	5	1774	4	17.5436	0.5	943.3	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000036112	Metap2	ENSMUST00000180688	ENSMUSP00000137652	TRANSLATION	protein_coding	stop	-	3	233	3	6.33	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000181434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036112	Metap2	ENSMUST00000047910	ENSMUSP00000048285	TRANSLATION	protein_coding	-	CCDS48673.1	1	478	11	12.49	6.5	156.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036112	Metap2	ENSMUST00000180840	ENSMUSP00000138006	TRANSLATION	protein_coding	-	CCDS48673.1	1	478	11	12.49	6.5	156.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036112	Metap2	ENSMUST00000180739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036112	Metap2	ENSMUST00000215642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036112	Metap2	ENSMUST00000181091	ENSMUSP00000137904	TRANSLATION	protein_coding	-	-	1	455	11	11.74	1.2	156.7	0	-4,-5	-	-	16.572	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000181009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036112	Metap2	ENSMUST00000181236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036112	Metap2	ENSMUST00000180392	ENSMUSP00000137681	TRANSLATION	nonsense_mediated_decay	start	-	5	186	5	4.962	0	119.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000181104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036112	Metap2	ENSMUST00000181442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036112	Metap2	ENSMUST00000181740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036112	Metap2	ENSMUST00000181217	ENSMUSP00000138083	TRANSLATION	protein_coding	-	-	1	488	11	12.325	0	156.7	0	-4,-5	-	-	17.67	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000216232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036112	Metap2	ENSMUST00000181470	ENSMUSP00000138050	TRANSLATION	protein_coding	start	-	2	106	5	3.33	0	45.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000180375	ENSMUSP00000137911	TRANSLATION	protein_coding	start/stop	-	5	242	5	6.66	0	75.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036112	Metap2	ENSMUST00000181894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019966	Kitl	ENSMUST00000219050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019966	Kitl	ENSMUST00000219881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019966	Kitl	ENSMUST00000130190	ENSMUSP00000123360	TRANSLATION	protein_coding	stop	-	1	160	0	2.75	0	222.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019966	Kitl	ENSMUST00000218200	ENSMUSP00000151554	TRANSLATION	protein_coding	-	-	5	56	0	2	0	94.9	0	2,-2	-	-	0	MINOR
ENSMUSG00000019966	Kitl	ENSMUST00000020129	ENSMUSP00000020129	TRANSLATION	protein_coding	-	CCDS83751.1	1	245	0	6.25	6.3	427	1	1,-4	-	-	7.37	MINOR
ENSMUSG00000019966	Kitl	ENSMUST00000105283	ENSMUSP00000100920	TRANSLATION	protein_coding	-	CCDS36046.1	1	273	0	7	6.3	512.5	1	1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000003344	Btbd2	ENSMUST00000147162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003344	Btbd2	ENSMUST00000003434	ENSMUSP00000003434	TRANSLATION	protein_coding	-	CCDS48639.1	5	523	0	7.09	1.5	313.6	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000003344	Btbd2	ENSMUST00000131876	ENSMUSP00000120780	TRANSLATION	protein_coding	start/stop	-	5	256	0	3.64	0	116.6	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000003344	Btbd2	ENSMUST00000151794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003344	Btbd2	ENSMUST00000126980	ENSMUSP00000120751	TRANSLATION	protein_coding	-	-	5	508	0	7.09	0	313.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000000732	Icosl	ENSMUST00000217675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000732	Icosl	ENSMUST00000105393	ENSMUSP00000101032	TRANSLATION	protein_coding	-	CCDS35956.1	1	322	0	0.96	0.5	64.7	1	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000732	Icosl	ENSMUST00000219633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000732	Icosl	ENSMUST00000219038	ENSMUSP00000151346	TRANSLATION	protein_coding	start	-	5	344	0	0.96	0	64.7	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000049641	Vgll2	ENSMUST00000163017	ENSMUSP00000124091	TRANSLATION	protein_coding	-	CCDS23837.1	1	322	0	0.4	1.5	72.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003226	Ranbp2	ENSMUST00000219332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003226	Ranbp2	ENSMUST00000003310	ENSMUSP00000003310	TRANSLATION	protein_coding	-	CCDS23861.1	5	3053	8	7.3	0.5	1267.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000003226	Ranbp2	ENSMUST00000220131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051736	Fam229b	ENSMUST00000135785	ENSMUSP00000118928	TRANSLATION	protein_coding	-	CCDS23786.1	3	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000139743	ENSMUSP00000118545	TRANSLATION	protein_coding	-	CCDS23786.1	5	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000125042	ENSMUSP00000121708	TRANSLATION	protein_coding	-	-	5	63	0	0	0	71.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051736	Fam229b	ENSMUST00000149949	ENSMUSP00000121946	TRANSLATION	protein_coding	-	CCDS23786.1	3	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000063204	ENSMUSP00000063508	TRANSLATION	protein_coding	-	CCDS23786.1	1	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000154981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051736	Fam229b	ENSMUST00000124941	ENSMUSP00000123540	TRANSLATION	protein_coding	-	CCDS23786.1	1	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000136546	ENSMUSP00000121597	TRANSLATION	protein_coding	-	CCDS23786.1	3	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000137132	ENSMUSP00000119802	TRANSLATION	protein_coding	-	CCDS23786.1	5	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000051736	Fam229b	ENSMUST00000134279	ENSMUSP00000118858	TRANSLATION	protein_coding	-	CCDS23786.1	3	80	0	0	8.8	172.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000003923	Tfam	ENSMUST00000145220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003923	Tfam	ENSMUST00000121685	ENSMUSP00000113581	TRANSLATION	protein_coding	-	-	2	199	0	5.16	0	129	0	-4,-7	-	-	11.868	ALTERNATIVE:2
ENSMUSG00000003923	Tfam	ENSMUST00000152505	ENSMUSP00000120871	TRANSLATION	protein_coding	stop	-	3	143	0	3.83	0	75.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003923	Tfam	ENSMUST00000105432	ENSMUSP00000101072	TRANSLATION	protein_coding	-	-	1	215	0	5.226	0	129	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000003923	Tfam	ENSMUST00000092430	ENSMUSP00000090086	TRANSLATION	protein_coding	-	CCDS23916.1	1	243	0	5.226	1.5	129	0	-3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000035027	Map2k2	ENSMUST00000220329	ENSMUSP00000151784	TRANSLATION	protein_coding	start	-	3	196	0	3.5	0	54.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035027	Map2k2	ENSMUST00000048223	ENSMUSP00000137918	TRANSLATION	nonsense_mediated_decay	-	-	1	203	17	3.03	0	67.2	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000035027	Map2k2	ENSMUST00000123241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035027	Map2k2	ENSMUST00000136743	ENSMUSP00000117567	TRANSLATION	protein_coding	stop	-	5	84	10	1.75	0	50	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035027	Map2k2	ENSMUST00000123888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035027	Map2k2	ENSMUST00000105331	ENSMUSP00000100968	TRANSLATION	protein_coding	-	CCDS83734.1	1	400	23	9.11	10.8	207.8	0	-2,-4	-	-	21	ALTERNATIVE:1
ENSMUSG00000035027	Map2k2	ENSMUST00000128937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035027	Map2k2	ENSMUST00000143517	ENSMUSP00000121111	TRANSLATION	protein_coding	-	CCDS24044.1	1	401	23	9.11	10.8	207.8	0	-2,-4	-	-	21	PRINCIPAL:3
ENSMUSG00000035027	Map2k2	ENSMUST00000218571	ENSMUSP00000151546	TRANSLATION	protein_coding	start	-	3	65	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019826	Zbtb24	ENSMUST00000213797	ENSMUSP00000148861	TRANSLATION	protein_coding	-	-	1	688	24	2.15	0.5	202.3	0	-4,-5	-	-	7.86	MINOR
ENSMUSG00000019826	Zbtb24	ENSMUST00000080771	ENSMUSP00000079592	TRANSLATION	protein_coding	-	CCDS23804.1	1	710	32	3.65	0.5	232.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019826	Zbtb24	ENSMUST00000215881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019826	Zbtb24	ENSMUST00000216656	ENSMUSP00000150197	TRANSLATION	protein_coding	-	-	1	354	4	0.2	0.5	115.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019826	Zbtb24	ENSMUST00000214159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044937	Ttc41	ENSMUST00000219476	ENSMUSP00000151796	TRANSLATION	nonsense_mediated_decay	start	-	1	50	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044937	Ttc41	ENSMUST00000061458	ENSMUSP00000062844	TRANSLATION	protein_coding	-	CCDS24099.1	1	409	10	0	0.5	0	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000044937	Ttc41	ENSMUST00000075632	ENSMUSP00000075059	TRANSLATION	protein_coding	-	CCDS24098.1	1	1318	14	0	0.5	32.1	0	-4,-5	-	-	11.682	PRINCIPAL:2
ENSMUSG00000044937	Ttc41	ENSMUST00000219108	ENSMUSP00000151920	TRANSLATION	protein_coding	-	-	1	600	14	0	0.5	33.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044937	Ttc41	ENSMUST00000217747	ENSMUSP00000151242	TRANSLATION	protein_coding	-	CCDS24099.1	1	409	10	0	0.5	0	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000044937	Ttc41	ENSMUST00000219070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062981	Mrpl42	ENSMUST00000217777	ENSMUSP00000151315	TRANSLATION	protein_coding	-	-	1	77	0	2.25	0	43	0	-4,-2	-	-	3.594	MINOR
ENSMUSG00000062981	Mrpl42	ENSMUST00000218996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062981	Mrpl42	ENSMUST00000219019	ENSMUSP00000151613	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	2.25	0	43	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062981	Mrpl42	ENSMUST00000075829	ENSMUSP00000075226	TRANSLATION	protein_coding	-	CCDS24137.1	1	142	0	3.58	7.5	138.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000062981	Mrpl42	ENSMUST00000218893	ENSMUSP00000151636	TRANSLATION	protein_coding	-	CCDS24137.1	1	142	0	3.58	7.5	138.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020154	Ptprb	ENSMUST00000218553	ENSMUSP00000151821	TRANSLATION	protein_coding	-	-	5	2285	13	8.58	0.5	806.3	0	-1,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000020154	Ptprb	ENSMUST00000217925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020154	Ptprb	ENSMUST00000092167	ENSMUSP00000089805	TRANSLATION	protein_coding	-	CCDS36063.1	1	1998	13	8.58	3.9	806.3	0	3,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000020154	Ptprb	ENSMUST00000218601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020331	Hcn2	ENSMUST00000020581	ENSMUSP00000020581	TRANSLATION	protein_coding	-	CCDS23986.1	5	863	14	6.8	1.5	212.4	3	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020331	Hcn2	ENSMUST00000099513	ENSMUSP00000097113	TRANSLATION	protein_coding	-	CCDS23986.1	1	863	14	6.8	1.5	212.4	3	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000093866	Olfr802	ENSMUST00000217576	ENSMUSP00000150123	TRANSLATION	protein_coding	-	CCDS24329.1	5	312	0	0.42	7.5	188.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000093866	Olfr802	ENSMUST00000203785	ENSMUSP00000144741	TRANSLATION	protein_coding	-	CCDS24329.1	5	312	0	0.42	7.5	188.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000093866	Olfr802	ENSMUST00000074713	ENSMUSP00000074275	TRANSLATION	protein_coding	-	CCDS24329.1	-	312	0	0.42	7.5	188.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074780	Anapc15-ps	ENSMUST00000099328	ENSMUSP00000096931	TRANSLATION	protein_coding	-	-	5	141	0	1	0.5	122.5	0	-4,-2	-	-	12	PRINCIPAL:5
ENSMUSG00000074780	Anapc15-ps	ENSMUST00000218771	ENSMUSP00000151380	TRANSLATION	protein_coding	-	-	-	132	0	1	1.5	122.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040034	Nup43	ENSMUST00000162527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040034	Nup43	ENSMUST00000162346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040034	Nup43	ENSMUST00000040135	ENSMUSP00000046732	TRANSLATION	protein_coding	-	CCDS48493.1	1	380	0	7.75	8.8	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000040034	Nup43	ENSMUST00000161060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019804	Snx3	ENSMUST00000019939	ENSMUSP00000019939	TRANSLATION	protein_coding	-	CCDS23812.1	1	162	0	4.75	19.5	98.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019804	Snx3	ENSMUST00000105500	ENSMUSP00000101139	TRANSLATION	protein_coding	-	-	5	140	0	4	2.4	78.5	0	-4,-5	-	-	9.604	MINOR
ENSMUSG00000019804	Snx3	ENSMUST00000105499	ENSMUSP00000101138	TRANSLATION	protein_coding	-	-	5	130	0	3.75	1.2	41.6	0	-4,-5	-	-	6.59	MINOR
ENSMUSG00000056758	Hmga2	ENSMUST00000159699	ENSMUSP00000123998	TRANSLATION	protein_coding	-	CCDS83758.1	1	129	0	0	0.5	40.9	0	-4,-6	-	-	6	MINOR
ENSMUSG00000056758	Hmga2	ENSMUST00000072777	ENSMUSP00000072556	TRANSLATION	protein_coding	-	CCDS36073.1	1	108	0	0	10.3	40.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000056758	Hmga2	ENSMUST00000159310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094314	Gm4301	ENSMUST00000186197	ENSMUSP00000140999	TRANSLATION	protein_coding	-	-	-	289	0	0.8	0.5	48.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037202	Prf1	ENSMUST00000035419	ENSMUSP00000041483	TRANSLATION	protein_coding	-	CCDS23875.1	1	554	7	2	0.5	191.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037202	Prf1	ENSMUST00000219375	ENSMUSP00000151354	TRANSLATION	protein_coding	-	CCDS23875.1	1	554	7	2	0.5	191.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000044581	4932415D10Rik	ENSMUST00000171401	ENSMUSP00000126178	TRANSLATION	protein_coding	stop	-	-	563	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044581	4932415D10Rik	ENSMUST00000217661	ENSMUSP00000151425	TRANSLATION	protein_coding	-	-	5	4986	0	0	0.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036676	Tmtc3	ENSMUST00000128009	ENSMUSP00000121473	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000036676	Tmtc3	ENSMUST00000058154	ENSMUSP00000061470	TRANSLATION	protein_coding	-	CCDS48684.1	1	920	0	3.48	1.5	292.3	14	-4,-7	-	-	11.604	PRINCIPAL:1
ENSMUSG00000036676	Tmtc3	ENSMUST00000099318	ENSMUSP00000096921	TRANSLATION	protein_coding	-	CCDS24150.1	1	658	0	3.678	0.5	242.2	14	-4,-7	-	-	8.994	MINOR
ENSMUSG00000036676	Tmtc3	ENSMUST00000130883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036676	Tmtc3	ENSMUST00000134477	ENSMUSP00000120025	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019861	Gopc	ENSMUST00000217753	ENSMUSP00000151773	TRANSLATION	protein_coding	start	-	1	403	0	2.9	0	61.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019861	Gopc	ENSMUST00000020008	ENSMUSP00000020008	TRANSLATION	protein_coding	-	CCDS35898.1	1	455	0	2.9	0.5	61.4	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000019861	Gopc	ENSMUST00000217995	ENSMUSP00000151595	TRANSLATION	protein_coding	start	-	3	103	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019861	Gopc	ENSMUST00000105475	ENSMUSP00000101115	TRANSLATION	protein_coding	-	-	5	463	0	2.9	0	61.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000019861	Gopc	ENSMUST00000217710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019861	Gopc	ENSMUST00000220099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075046	Duxf3	ENSMUST00000174056	ENSMUSP00000133909	TRANSLATION	protein_coding	-	-	5	184	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075046	Duxf3	ENSMUST00000176875	ENSMUSP00000145004	TRANSLATION	protein_coding	-	-	-	674	0	0.2	0.5	105	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020124	Usp15	ENSMUST00000218079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000219992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000219010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000220377	ENSMUSP00000151244	TRANSLATION	protein_coding	-	CCDS24217.1	1	981	8	12.348	12.8	526.9	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000020124	Usp15	ENSMUST00000217985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000219413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000219937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000020334	ENSMUSP00000020334	TRANSLATION	protein_coding	-	-	1	952	8	12.348	12.8	526.9	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000020124	Usp15	ENSMUST00000220284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020124	Usp15	ENSMUST00000219619	ENSMUSP00000152028	TRANSLATION	protein_coding	start/stop	-	3	138	0	3	0	138.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020124	Usp15	ENSMUST00000218042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045680	Tcf21	ENSMUST00000049930	ENSMUSP00000053178	TRANSLATION	protein_coding	-	CCDS23732.1	1	179	0	0.6	15	59.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000045680	Tcf21	ENSMUST00000218002	ENSMUSP00000151767	TRANSLATION	protein_coding	-	-	-	169	0	0.6	0	59.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000218438	ENSMUSP00000151836	TRANSLATION	protein_coding	stop	-	1	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000174189	ENSMUSP00000133279	TRANSLATION	protein_coding	-	CCDS56706.1	5	2039	8	7.76	0.5	496.9	0	-4,-5	-	-	16.266	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000227494	ENSMUSP00000154527	TRANSLATION	protein_coding	stop	-	-	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000173081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047146	Tet1	ENSMUST00000174121	ENSMUSP00000134328	TRANSLATION	protein_coding	start/stop	-	2	399	0	2.93	0	359.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000050826	ENSMUSP00000059527	TRANSLATION	protein_coding	-	-	5	2007	8	8.26	0.5	509.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047146	Tet1	ENSMUST00000173905	ENSMUSP00000134571	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	1	0	63.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000228901	ENSMUSP00000154690	TRANSLATION	protein_coding	stop	-	-	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000173087	ENSMUSP00000133706	TRANSLATION	protein_coding	start	-	2	138	0	2.93	0	188.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047146	Tet1	ENSMUST00000218782	ENSMUSP00000151633	TRANSLATION	protein_coding	stop	-	1	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001786	Fbxo7	ENSMUST00000001837	ENSMUSP00000001837	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001786	Fbxo7	ENSMUST00000130320	ENSMUSP00000120840	TRANSLATION	protein_coding	-	CCDS24095.1	1	523	0	4.08	1.5	88.6	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000001786	Fbxo7	ENSMUST00000120344	ENSMUSP00000113222	TRANSLATION	protein_coding	-	CCDS78875.1	1	444	0	4.08	1.5	88.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000001786	Fbxo7	ENSMUST00000134490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001786	Fbxo7	ENSMUST00000130383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001786	Fbxo7	ENSMUST00000117597	ENSMUSP00000113263	TRANSLATION	protein_coding	-	CCDS83740.1	1	442	0	4.08	1.5	88.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000001786	Fbxo7	ENSMUST00000147168	ENSMUSP00000119334	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020019	Ntn4	ENSMUST00000147080	ENSMUSP00000123306	TRANSLATION	protein_coding	stop	-	5	143	2	1	0	154.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020019	Ntn4	ENSMUST00000020204	ENSMUSP00000020204	TRANSLATION	protein_coding	-	CCDS24128.1	1	628	2	6	7.5	415	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000035189	Ano4	ENSMUST00000183268	ENSMUSP00000138627	TRANSLATION	nonsense_mediated_decay	-	-	1	190	0	0	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182462	ENSMUSP00000138440	TRANSLATION	nonsense_mediated_decay	-	-	1	155	0	0	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182598	ENSMUSP00000138174	TRANSLATION	protein_coding	start/stop	-	5	149	0	0.9	0	99.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182624	ENSMUSP00000138525	TRANSLATION	protein_coding	stop	-	5	284	0	0	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182341	ENSMUSP00000138193	TRANSLATION	protein_coding	-	CCDS24114.2	5	955	0	3.6	8.8	798.4	7	-4,-5	-	-	13.998	PRINCIPAL:2
ENSMUSG00000035189	Ano4	ENSMUST00000182041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035189	Ano4	ENSMUST00000180843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035189	Ano4	ENSMUST00000181976	ENSMUSP00000138792	TRANSLATION	protein_coding	-	-	1	245	0	0	0	113	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182419	ENSMUSP00000138435	TRANSLATION	nonsense_mediated_decay	-	-	5	356	0	0	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035189	Ano4	ENSMUST00000182888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035189	Ano4	ENSMUST00000182790	ENSMUSP00000138325	TRANSLATION	protein_coding	-	-	5	920	0	4.1	6.3	798.4	7	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000035189	Ano4	ENSMUST00000182613	ENSMUSP00000138268	TRANSLATION	protein_coding	-	-	5	920	0	4.1	6.3	798.4	7	-4,-5	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000020323	Prss57	ENSMUST00000167987	ENSMUSP00000130448	TRANSLATION	protein_coding	start	-	1	93	0	2	0	34.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020323	Prss57	ENSMUST00000171681	ENSMUSP00000131642	TRANSLATION	protein_coding	start	-	3	107	3	3.18	0	39.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020323	Prss57	ENSMUST00000169684	ENSMUSP00000132215	TRANSLATION	protein_coding	-	CCDS35968.1	1	284	7	6.51	0.5	203.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020323	Prss57	ENSMUST00000020573	ENSMUSP00000020573	TRANSLATION	protein_coding	-	CCDS35968.1	1	284	7	6.51	0.5	203.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000001436	Slc19a1	ENSMUST00000130703	ENSMUSP00000115658	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	46.1	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000001436	Slc19a1	ENSMUST00000127249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001436	Slc19a1	ENSMUST00000133059	ENSMUSP00000120266	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	60.6	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000001436	Slc19a1	ENSMUST00000144234	ENSMUSP00000116784	TRANSLATION	protein_coding	-	CCDS35947.1	1	512	0	0	1.5	545.9	25	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000001436	Slc19a1	ENSMUST00000136150	ENSMUSP00000121237	TRANSLATION	protein_coding	stop	-	3	243	0	0	0	299.6	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000001436	Slc19a1	ENSMUST00000132984	ENSMUSP00000116657	TRANSLATION	protein_coding	stop	-	2	232	0	0	0	292.6	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000001436	Slc19a1	ENSMUST00000131031	ENSMUSP00000114884	TRANSLATION	protein_coding	start	-	3	116	0	0	0	144.7	9	-1,-5	-	-	-1	MINOR
ENSMUSG00000001436	Slc19a1	ENSMUST00000105410	ENSMUSP00000101050	TRANSLATION	protein_coding	-	CCDS35947.1	1	512	0	0	1.5	545.9	25	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000001436	Slc19a1	ENSMUST00000136925	ENSMUSP00000119382	TRANSLATION	protein_coding	-	-	1	476	0	0	0	542.3	24	-4,-7	-	-	5.784	ALTERNATIVE:2
ENSMUSG00000039232	Stx11	ENSMUST00000163425	ENSMUSP00000132758	TRANSLATION	protein_coding	-	CCDS48500.1	1	287	0	1.2	7.5	213.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039232	Stx11	ENSMUST00000042861	ENSMUSP00000046243	TRANSLATION	protein_coding	-	CCDS48500.1	1	287	0	1.2	7.5	213.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039232	Stx11	ENSMUST00000219727	ENSMUSP00000151223	TRANSLATION	protein_coding	stop	-	2	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039232	Stx11	ENSMUST00000218685	ENSMUSP00000151448	TRANSLATION	protein_coding	stop	-	2	84	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020212	Mdm1	ENSMUST00000163238	ENSMUSP00000127919	TRANSLATION	protein_coding	-	CCDS48697.1	1	718	0	0	0.5	600.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020212	Mdm1	ENSMUST00000020437	ENSMUSP00000020437	TRANSLATION	protein_coding	-	CCDS36069.1	1	708	0	0	0.5	573.4	0	-4,-7	-	-	4.356	MINOR
ENSMUSG00000020212	Mdm1	ENSMUST00000219827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020212	Mdm1	ENSMUST00000218011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020212	Mdm1	ENSMUST00000218400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020212	Mdm1	ENSMUST00000217767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020212	Mdm1	ENSMUST00000219087	ENSMUSP00000151424	TRANSLATION	protein_coding	-	-	2	240	0	0	0	169.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020212	Mdm1	ENSMUST00000164077	ENSMUSP00000132966	TRANSLATION	protein_coding	-	CCDS48698.1	1	688	0	0	0.5	573.4	0	-4,-7	-	-	4.356	MINOR
ENSMUSG00000020212	Mdm1	ENSMUST00000169817	ENSMUSP00000126258	TRANSLATION	protein_coding	-	CCDS48699.1	1	673	0	0	0.5	499.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020212	Mdm1	ENSMUST00000219605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095022	Gm20765	ENSMUST00000181707	ENSMUSP00000137866	TRANSLATION	protein_coding	-	-	3	261	0	0.8	0.5	93.9	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000095022	Gm20765	ENSMUST00000181703	ENSMUSP00000137878	TRANSLATION	protein_coding	-	-	2	261	0	0.8	0.5	93.9	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000095022	Gm20765	ENSMUST00000177792	ENSMUSP00000137128	TRANSLATION	protein_coding	-	CCDS78893.1	-	264	0	0.8	0.5	94.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020133	2310011J03Rik	ENSMUST00000020341	ENSMUSP00000020341	TRANSLATION	protein_coding	-	CCDS24017.1	1	109	0	0	1.5	124.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000071195	Gm10318	ENSMUST00000217996	ENSMUSP00000151667	TRANSLATION	protein_coding	-	-	5	212	0	0	0.5	35.7	0	-4,-5	-	-	3.408	MINOR
ENSMUSG00000071195	Gm10318	ENSMUST00000186874	ENSMUSP00000151495	TRANSLATION	protein_coding	-	-	-	225	0	0	0.5	62.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094295	Olfr819	ENSMUST00000216322	ENSMUSP00000150514	TRANSLATION	protein_coding	-	-	5	314	0	0.36	1.7	185.4	6	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000094295	Olfr819	ENSMUST00000167974	ENSMUSP00000131761	TRANSLATION	protein_coding	-	CCDS48734.1	-	320	0	0.36	2.7	185.4	6	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000035781	R3hdm4	ENSMUST00000045628	ENSMUSP00000044570	TRANSLATION	protein_coding	-	CCDS23997.1	1	262	0	0	1.5	149.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035781	R3hdm4	ENSMUST00000219358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035781	R3hdm4	ENSMUST00000171416	ENSMUSP00000132266	TRANSLATION	protein_coding	-	CCDS23997.1	1	262	0	0	1.5	149.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035781	R3hdm4	ENSMUST00000218970	ENSMUSP00000151887	TRANSLATION	nonsense_mediated_decay	-	-	2	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035781	R3hdm4	ENSMUST00000219867	ENSMUSP00000151679	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035781	R3hdm4	ENSMUST00000219206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035781	R3hdm4	ENSMUST00000218750	ENSMUSP00000151535	TRANSLATION	protein_coding	stop	-	3	122	0	0	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035781	R3hdm4	ENSMUST00000217976	ENSMUSP00000151403	TRANSLATION	nonsense_mediated_decay	-	-	2	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036009	Mettl25	ENSMUST00000176924	ENSMUSP00000134888	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036009	Mettl25	ENSMUST00000176830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036009	Mettl25	ENSMUST00000046638	ENSMUSP00000038665	TRANSLATION	protein_coding	-	CCDS36049.2	1	600	16	0	0.5	104.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036009	Mettl25	ENSMUST00000176040	ENSMUSP00000135255	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020072	Pbld2	ENSMUST00000020262	ENSMUSP00000020262	TRANSLATION	protein_coding	-	CCDS23894.1	1	288	0	6.138	7.1	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020072	Pbld2	ENSMUST00000124784	ENSMUSP00000121682	TRANSLATION	protein_coding	stop	-	3	175	0	2.95	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020072	Pbld2	ENSMUST00000130531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037012	Hk1	ENSMUST00000142527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037012	Hk1	ENSMUST00000133429	ENSMUSP00000123375	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000072357	ENSMUSP00000072195	TRANSLATION	protein_coding	-	CCDS48578.1	5	945	58	18.035	0.5	1050.3	0	-4,-6	-	-	14.994	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000161160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037012	Hk1	ENSMUST00000152761	ENSMUSP00000117752	TRANSLATION	protein_coding	stop	-	3	223	18	6.41	0	233.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000134877	ENSMUSP00000121487	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000140383	ENSMUSP00000114586	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000130422	ENSMUSP00000118601	TRANSLATION	protein_coding	-	-	5	917	58	18.71	0.5	1062.9	0	-4,-5	-	-	17.1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000130091	ENSMUSP00000122791	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000154489	ENSMUSP00000118576	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000132926	ENSMUSP00000115218	TRANSLATION	protein_coding	stop	-	5	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000143236	ENSMUSP00000115990	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000136548	ENSMUSP00000122479	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000143179	ENSMUSP00000120151	TRANSLATION	protein_coding	stop	-	3	80	6	2.05	0	75.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000135317	ENSMUSP00000115426	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000139228	ENSMUSP00000118166	TRANSLATION	protein_coding	stop	-	5	184	10	5.41	0	191	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000099691	ENSMUSP00000097282	TRANSLATION	protein_coding	-	CCDS48577.1	1	918	58	19.16	3.7	1062.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037012	Hk1	ENSMUST00000116238	ENSMUSP00000111946	TRANSLATION	protein_coding	-	CCDS48578.1	1	945	58	18.035	0.5	1050.3	0	-4,-6	-	-	14.994	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000149534	ENSMUSP00000119812	TRANSLATION	protein_coding	start/stop	-	1	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037012	Hk1	ENSMUST00000134447	ENSMUSP00000122717	TRANSLATION	protein_coding	stop	-	1	49	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095804	Olfr824	ENSMUST00000074161	ENSMUSP00000073794	TRANSLATION	protein_coding	-	CCDS24349.1	-	315	0	0.2	3.9	182.1	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000095804	Olfr824	ENSMUST00000215217	ENSMUSP00000150606	TRANSLATION	protein_coding	-	CCDS24349.1	5	315	0	0.2	3.9	182.1	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000095804	Olfr824	ENSMUST00000214192	ENSMUSP00000150662	TRANSLATION	protein_coding	-	CCDS24349.1	5	315	0	0.2	3.9	182.1	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000056853	Olfr765	ENSMUST00000071559	ENSMUSP00000071490	TRANSLATION	protein_coding	-	CCDS48731.1	-	309	0	0.42	8.8	167.4	4	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000056853	Olfr765	ENSMUST00000216460	ENSMUSP00000150725	TRANSLATION	protein_coding	-	CCDS48731.1	5	309	0	0.42	8.8	167.4	4	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020038	Cry1	ENSMUST00000214248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020038	Cry1	ENSMUST00000214675	ENSMUSP00000150910	TRANSLATION	protein_coding	start/stop	-	3	59	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020038	Cry1	ENSMUST00000214805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020038	Cry1	ENSMUST00000020227	ENSMUSP00000020227	TRANSLATION	protein_coding	-	CCDS24089.1	1	606	30	12.75	0.5	416.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020163	Uqcr11	ENSMUST00000020372	ENSMUSP00000020372	TRANSLATION	protein_coding	-	CCDS35981.1	1	56	0	1.5	17.5	111.7	0	-3,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000020163	Uqcr11	ENSMUST00000141683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020163	Uqcr11	ENSMUST00000138428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020230	Prmt2	ENSMUST00000099572	ENSMUSP00000097167	TRANSLATION	protein_coding	-	CCDS78836.1	1	475	21	9.52	0.5	70.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020230	Prmt2	ENSMUST00000020452	ENSMUSP00000020452	TRANSLATION	protein_coding	-	CCDS35942.1	1	445	21	9.16	1.5	70.6	0	-4,-5	-	-	17.28	PRINCIPAL:3
ENSMUSG00000020230	Prmt2	ENSMUST00000220116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020230	Prmt2	ENSMUST00000137857	ENSMUSP00000137725	TRANSLATION	nonsense_mediated_decay	-	-	2	254	19	5.1	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020230	Prmt2	ENSMUST00000099571	ENSMUSP00000097166	TRANSLATION	protein_coding	-	CCDS35942.1	1	445	21	9.16	1.5	70.6	0	-4,-5	-	-	17.28	PRINCIPAL:3
ENSMUSG00000020230	Prmt2	ENSMUST00000217726	ENSMUSP00000151456	TRANSLATION	nonsense_mediated_decay	-	-	3	127	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020230	Prmt2	ENSMUST00000128048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020230	Prmt2	ENSMUST00000128099	ENSMUSP00000137707	TRANSLATION	nonsense_mediated_decay	-	-	1	254	19	5.1	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020230	Prmt2	ENSMUST00000144670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015755	Tab2	ENSMUST00000143848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015755	Tab2	ENSMUST00000142007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015755	Tab2	ENSMUST00000130322	ENSMUSP00000122559	TRANSLATION	protein_coding	stop	-	1	385	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015755	Tab2	ENSMUST00000146444	ENSMUSP00000121266	TRANSLATION	protein_coding	-	CCDS23691.1	5	693	4	3	7.8	36.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000015755	Tab2	ENSMUST00000147938	ENSMUSP00000119515	TRANSLATION	protein_coding	stop	-	5	553	0	2	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049422	Chchd10	ENSMUST00000219435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049422	Chchd10	ENSMUST00000219839	ENSMUSP00000151675	TRANSLATION	protein_coding	-	CCDS23938.1	1	138	0	0	1.7	0	0	-3,1	-	-	0	PRINCIPAL:1
ENSMUSG00000049422	Chchd10	ENSMUST00000058906	ENSMUSP00000059575	TRANSLATION	protein_coding	-	CCDS23938.1	1	138	0	0	1.7	0	0	-3,1	-	-	0	PRINCIPAL:1
ENSMUSG00000020042	Btbd11	ENSMUST00000105306	ENSMUSP00000100943	TRANSLATION	protein_coding	-	CCDS36018.1	1	640	0	6.07	2.9	140.8	0	-4,-7	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000020042	Btbd11	ENSMUST00000156123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020042	Btbd11	ENSMUST00000105307	ENSMUSP00000100944	TRANSLATION	protein_coding	-	CCDS24091.2	1	1109	0	6.27	0.5	139.7	0	-4,-7	-	-	11.934	PRINCIPAL:3
ENSMUSG00000020042	Btbd11	ENSMUST00000128338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020042	Btbd11	ENSMUST00000020231	ENSMUSP00000020231	TRANSLATION	protein_coding	stop	-	5	793	0	3.18	0	34.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020042	Btbd11	ENSMUST00000145323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020042	Btbd11	ENSMUST00000135235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020042	Btbd11	ENSMUST00000145433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034889	Cactin	ENSMUST00000050867	ENSMUSP00000059533	TRANSLATION	protein_coding	-	CCDS35995.1	1	772	0	0	0.5	412.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034889	Cactin	ENSMUST00000219285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034889	Cactin	ENSMUST00000218120	ENSMUSP00000151248	TRANSLATION	protein_coding	start/stop	-	3	222	0	0	0	178.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036764	Dnajc12	ENSMUST00000136832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036764	Dnajc12	ENSMUST00000129625	ENSMUSP00000120892	TRANSLATION	protein_coding	stop	-	3	116	0	0.5	1.7	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036764	Dnajc12	ENSMUST00000043317	ENSMUSP00000041298	TRANSLATION	protein_coding	-	CCDS23899.1	1	198	0	2.75	6.3	63.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039116	Adgrg6	ENSMUST00000238680	ENSMUSP00000158717	TRANSLATION	protein_coding	-	-	-	1220	4	3.16	1	291.8	7	-2,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000039116	Adgrg6	ENSMUST00000208429	ENSMUSP00000146821	TRANSLATION	protein_coding	-	-	5	1193	4	3.16	1	291.8	7	-2,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000039116	Adgrg6	ENSMUST00000208905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039116	Adgrg6	ENSMUST00000207953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039116	Adgrg6	ENSMUST00000041168	ENSMUSP00000043055	TRANSLATION	protein_coding	-	CCDS35848.1	1	1165	4	3.16	0.5	291.8	7	-2,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000095608	Olfr247	ENSMUST00000170920	ENSMUSP00000128078	TRANSLATION	protein_coding	-	-	-	320	0	0.36	2.7	186.1	8	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000095608	Olfr247	ENSMUST00000215871	ENSMUSP00000149253	TRANSLATION	protein_coding	-	-	5	314	0	0.36	1.7	186.1	8	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000096380	Gm19668	ENSMUST00000178581	ENSMUSP00000136230	TRANSLATION	protein_coding	-	CCDS70050.1	-	248	0	0	0.5	70.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020014	Cfap54	ENSMUST00000212902	ENSMUSP00000148636	TRANSLATION	protein_coding	-	-	1	3171	0	0	0.5	894.4	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000020014	Cfap54	ENSMUST00000220280	ENSMUSP00000151550	TRANSLATION	protein_coding	start/stop	-	5	160	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000020200	ENSMUSP00000020200	TRANSLATION	protein_coding	-	-	5	816	0	0	0	894.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000020014	Cfap54	ENSMUST00000168617	ENSMUSP00000127905	TRANSLATION	protein_coding	stop	-	5	598	0	0	0	732.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000067705	ENSMUSP00000150412	TRANSLATION	nonsense_mediated_decay	start	-	1	312	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000171781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020014	Cfap54	ENSMUST00000165090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020014	Cfap54	ENSMUST00000168110	ENSMUSP00000129517	TRANSLATION	protein_coding	-	-	5	3106	0	0	0	894.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000020014	Cfap54	ENSMUST00000170065	ENSMUSP00000126955	TRANSLATION	nonsense_mediated_decay	start	-	5	167	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000164979	ENSMUSP00000129650	TRANSLATION	protein_coding	start	-	5	314	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000163209	ENSMUSP00000127637	TRANSLATION	nonsense_mediated_decay	start	-	1	187	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020014	Cfap54	ENSMUST00000168080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019906	Lin7a	ENSMUST00000020057	ENSMUSP00000020057	TRANSLATION	protein_coding	-	CCDS24160.1	1	233	3	4.55	5.3	126.3	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000019906	Lin7a	ENSMUST00000218031	ENSMUSP00000151715	TRANSLATION	protein_coding	-	CCDS36050.1	1	111	2	1.8	1.5	61.2	0	-4,-5	-	-	4.825	MINOR
ENSMUSG00000019906	Lin7a	ENSMUST00000105280	ENSMUSP00000100916	TRANSLATION	protein_coding	-	CCDS36050.1	1	111	2	1.8	1.5	61.2	0	-4,-5	-	-	4.825	MINOR
ENSMUSG00000061367	Olfr771	ENSMUST00000214271	ENSMUSP00000151108	TRANSLATION	protein_coding	-	CCDS24308.1	5	317	0	0.28	3.9	161.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000061367	Olfr771	ENSMUST00000078914	ENSMUSP00000077948	TRANSLATION	protein_coding	-	CCDS24308.1	-	317	0	0.28	3.9	161.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020150	Gamt	ENSMUST00000148615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020150	Gamt	ENSMUST00000105363	ENSMUSP00000101002	TRANSLATION	protein_coding	-	CCDS35976.1	1	236	20	5.5	10.1	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020150	Gamt	ENSMUST00000020359	ENSMUSP00000020359	TRANSLATION	protein_coding	-	CCDS83728.1	1	252	20	5.25	0.5	0	0	-4,-5	-	-	11.502	MINOR
ENSMUSG00000020150	Gamt	ENSMUST00000144798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019785	Clvs2	ENSMUST00000019920	ENSMUSP00000019920	TRANSLATION	protein_coding	-	CCDS23770.1	1	327	0	3	18.5	144.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019785	Clvs2	ENSMUST00000161692	ENSMUSP00000151805	TRANSLATION	protein_coding	-	-	1	245	0	1.4	0	66.9	0	-4,-5	-	-	4.14	MINOR
ENSMUSG00000019785	Clvs2	ENSMUST00000160299	ENSMUSP00000125100	TRANSLATION	protein_coding	-	-	1	227	0	1.4	0	67.1	0	-4,-5	-	-	4.152	MINOR
ENSMUSG00000019785	Clvs2	ENSMUST00000159533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069670	Nkain2	ENSMUST00000191234	ENSMUSP00000140463	TRANSLATION	protein_coding	-	CCDS78805.1	1	208	0	0	13.1	354.1	5	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000069670	Nkain2	ENSMUST00000092603	ENSMUSP00000090265	TRANSLATION	protein_coding	start/stop	-	5	91	0	0	0	145.2	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000069670	Nkain2	ENSMUST00000092602	ENSMUSP00000090264	TRANSLATION	protein_coding	start	-	-	185	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069670	Nkain2	ENSMUST00000219125	ENSMUSP00000151959	TRANSLATION	protein_coding	-	-	1	196	0	0	0.5	266	4	-3,-5	-	-	0.714	MINOR
ENSMUSG00000069670	Nkain2	ENSMUST00000219306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069670	Nkain2	ENSMUST00000218645	ENSMUSP00000151255	TRANSLATION	protein_coding	-	-	5	213	0	0	4.1	352.4	5	-3,-5	-	-	6.922	MINOR
ENSMUSG00000020235	Fzr1	ENSMUST00000020457	ENSMUSP00000020457	TRANSLATION	nonsense_mediated_decay	-	-	1	361	0	8.36	0	47.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020235	Fzr1	ENSMUST00000127203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020235	Fzr1	ENSMUST00000150824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020235	Fzr1	ENSMUST00000118812	ENSMUSP00000112868	TRANSLATION	protein_coding	-	-	5	404	0	10.5	1.2	93.4	0	-4,-5	-	-	8.57	MINOR
ENSMUSG00000020235	Fzr1	ENSMUST00000140901	ENSMUSP00000114203	TRANSLATION	protein_coding	-	CCDS24057.1	1	493	0	12.25	13	93.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020235	Fzr1	ENSMUST00000138343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035459	Stab2	ENSMUST00000219280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035459	Stab2	ENSMUST00000219341	ENSMUSP00000151465	TRANSLATION	nonsense_mediated_decay	start	-	5	870	0	8.02	0	428.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035459	Stab2	ENSMUST00000219612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035459	Stab2	ENSMUST00000218366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035459	Stab2	ENSMUST00000035288	ENSMUSP00000048309	TRANSLATION	protein_coding	-	CCDS36021.1	1	2559	0	14.265	0.5	733.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000035459	Stab2	ENSMUST00000218408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035459	Stab2	ENSMUST00000219659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019791	Hint3	ENSMUST00000161074	ENSMUSP00000125552	TRANSLATION	protein_coding	-	CCDS23764.1	1	165	21	2.07	0.5	114.4	0	-4,-5	-	-	17.556	PRINCIPAL:1
ENSMUSG00000019791	Hint3	ENSMUST00000216617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019791	Hint3	ENSMUST00000160646	ENSMUSP00000125125	TRANSLATION	nonsense_mediated_decay	start	-	3	86	12	1.32	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019791	Hint3	ENSMUST00000019925	ENSMUSP00000019925	TRANSLATION	protein_coding	start/stop	-	3	164	21	2.235	0	109	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019791	Hint3	ENSMUST00000214782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019791	Hint3	ENSMUST00000217266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055053	Nfic	ENSMUST00000152670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055053	Nfic	ENSMUST00000221817	ENSMUSP00000152790	TRANSLATION	protein_coding	-	-	5	461	0	0	0	491.3	0	-4,-6	-	-	5.706	MINOR
ENSMUSG00000055053	Nfic	ENSMUST00000140916	ENSMUSP00000114469	TRANSLATION	protein_coding	start	-	3	96	0	0	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055053	Nfic	ENSMUST00000020461	ENSMUSP00000020461	TRANSLATION	protein_coding	-	CCDS24058.1	1	439	0	0	9.5	496.2	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000055053	Nfic	ENSMUST00000117966	ENSMUSP00000113046	TRANSLATION	protein_coding	-	-	1	430	0	0	5.3	491.3	0	-4,-6	-	-	7.224	MINOR
ENSMUSG00000055053	Nfic	ENSMUST00000078185	ENSMUSP00000077317	TRANSLATION	protein_coding	-	-	5	397	0	0	0	320.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000055053	Nfic	ENSMUST00000105321	ENSMUSP00000100958	TRANSLATION	protein_coding	-	CCDS35999.1	1	428	0	0	7.5	494.3	0	-4,-5	-	-	8.181	ALTERNATIVE:1
ENSMUSG00000062873	Olfr1355	ENSMUST00000078414	ENSMUSP00000077517	TRANSLATION	protein_coding	-	CCDS48615.1	2	310	0	0.48	1.5	163	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069707	Taar4	ENSMUST00000092660	ENSMUSP00000090330	TRANSLATION	protein_coding	-	CCDS23737.1	-	347	0	0.48	5.2	206.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000019913	Sim1	ENSMUST00000020071	ENSMUSP00000020071	TRANSLATION	protein_coding	-	CCDS48556.1	1	765	0	6.55	8.8	508.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000019913	Sim1	ENSMUST00000219436	ENSMUSP00000151816	TRANSLATION	protein_coding	-	-	5	94	0	1	0	28.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034057	Myrfl	ENSMUST00000048229	ENSMUSP00000037477	TRANSLATION	protein_coding	-	CCDS36066.1	1	904	0	0	0.5	391.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071340	Trappc3l	ENSMUST00000095758	ENSMUSP00000093432	TRANSLATION	protein_coding	-	CCDS48535.1	1	181	0	4.3	10.8	116.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000071340	Trappc3l	ENSMUST00000220095	ENSMUSP00000151285	TRANSLATION	protein_coding	start	-	3	164	0	3.8	0	116.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096718	Zfp781	ENSMUST00000076281	ENSMUSP00000075630	TRANSLATION	protein_coding	-	CCDS48649.1	5	243	0	1	0.5	75.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096718	Zfp781	ENSMUST00000219144	ENSMUSP00000151576	TRANSLATION	protein_coding	-	CCDS48649.1	1	243	0	1	0.5	75.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094080	Olfr8	ENSMUST00000216819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094080	Olfr8	ENSMUST00000081571	ENSMUSP00000080282	TRANSLATION	protein_coding	-	CCDS23971.1	-	310	0	0.36	1.5	158.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094080	Olfr8	ENSMUST00000214952	ENSMUSP00000148856	TRANSLATION	protein_coding	-	CCDS23971.1	5	310	0	0.36	1.5	158.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094080	Olfr8	ENSMUST00000203851	ENSMUSP00000144916	TRANSLATION	protein_coding	-	CCDS23971.1	3	310	0	0.36	1.5	158.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025403	Shmt2	ENSMUST00000218313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025403	Shmt2	ENSMUST00000220356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025403	Shmt2	ENSMUST00000218258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025403	Shmt2	ENSMUST00000026470	ENSMUSP00000026470	TRANSLATION	protein_coding	-	CCDS24244.1	1	504	18	10.5	6.3	690.7	0	-4,0	-	-	20.607	PRINCIPAL:2
ENSMUSG00000025403	Shmt2	ENSMUST00000217682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025403	Shmt2	ENSMUST00000218035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025403	Shmt2	ENSMUST00000219239	ENSMUSP00000151616	TRANSLATION	protein_coding	-	-	1	501	18	10.5	7.1	690.7	0	-4,0	-	-	21	ALTERNATIVE:1
ENSMUSG00000085111	Ascl4	ENSMUST00000156605	ENSMUSP00000137794	TRANSLATION	nonsense_mediated_decay	start	-	1	50	0	0.6	0	21.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000085111	Ascl4	ENSMUST00000170396	ENSMUSP00000137650	TRANSLATION	protein_coding	-	CCDS59549.1	-	144	0	0.8	1.5	60.2	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000020153	Ndufs7	ENSMUST00000105364	ENSMUSP00000101003	TRANSLATION	protein_coding	-	CCDS24015.1	5	224	11	4.3	0.5	84.3	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000020153	Ndufs7	ENSMUST00000020361	ENSMUSP00000020361	TRANSLATION	protein_coding	-	CCDS24015.1	1	224	11	4.3	0.5	84.3	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000020153	Ndufs7	ENSMUST00000155523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020153	Ndufs7	ENSMUST00000155336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020153	Ndufs7	ENSMUST00000157063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020153	Ndufs7	ENSMUST00000152939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035890	Rnf126	ENSMUST00000218770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035890	Rnf126	ENSMUST00000219189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035890	Rnf126	ENSMUST00000047203	ENSMUSP00000039486	TRANSLATION	protein_coding	-	CCDS23989.1	1	313	7	4.3	6.3	81.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020099	Unc5b	ENSMUST00000218637	ENSMUSP00000151251	TRANSLATION	protein_coding	-	-	1	934	0	13.31	7.5	480.6	0	4,-1	-	-	14.724	ALTERNATIVE:1
ENSMUSG00000020099	Unc5b	ENSMUST00000218316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020099	Unc5b	ENSMUST00000077925	ENSMUSP00000077080	TRANSLATION	protein_coding	-	CCDS23872.1	1	945	0	13.4486	7.5	480.6	0	4,-1	-	-	15	PRINCIPAL:2
ENSMUSG00000096687	Mfsd4b4	ENSMUST00000178563	ENSMUSP00000137516	TRANSLATION	protein_coding	-	-	5	457	0	0	0	0	12	-1,-3	-	-	0	MINOR
ENSMUSG00000096687	Mfsd4b4	ENSMUST00000239131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096687	Mfsd4b4	ENSMUST00000178045	ENSMUSP00000136934	TRANSLATION	protein_coding	-	-	3	503	0	0	0	48.2	13	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000096687	Mfsd4b4	ENSMUST00000239084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020009	Ifngr1	ENSMUST00000164591	ENSMUSP00000129309	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	1.2	0	39.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000020009	Ifngr1	ENSMUST00000168074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020009	Ifngr1	ENSMUST00000171772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020009	Ifngr1	ENSMUST00000172253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020009	Ifngr1	ENSMUST00000020188	ENSMUSP00000020188	TRANSLATION	protein_coding	-	CCDS35856.1	1	477	0	4	0.5	254.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020009	Ifngr1	ENSMUST00000110989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019982	Myb	ENSMUST00000216751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019982	Myb	ENSMUST00000188495	ENSMUSP00000139699	TRANSLATION	protein_coding	-	CCDS78800.1	1	755	0	3.95	0.5	502.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019982	Myb	ENSMUST00000214539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019982	Myb	ENSMUST00000216985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019982	Myb	ENSMUST00000186446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019982	Myb	ENSMUST00000020158	ENSMUSP00000020158	TRANSLATION	protein_coding	-	CCDS35861.1	1	636	0	3.95	0.5	491.7	0	-4,-5	-	-	11.376	PRINCIPAL:3
ENSMUSG00000112216	Gm32717	ENSMUST00000219147	ENSMUSP00000151792	TRANSLATION	protein_coding	-	-	-	802	0	1	15	346.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000090854	Gm4340	ENSMUST00000181036	ENSMUSP00000137984	TRANSLATION	protein_coding	-	-	3	265	0	0.8	0.5	68.8	0	-4,-5	-	-	11.934	ALTERNATIVE:2
ENSMUSG00000090854	Gm4340	ENSMUST00000163113	ENSMUSP00000130793	TRANSLATION	protein_coding	-	-	-	268	0	0.8	0.5	69.6	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000090854	Gm4340	ENSMUST00000181615	ENSMUSP00000137824	TRANSLATION	protein_coding	-	-	2	268	0	0.8	0.5	69.6	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000058537	AW822073	ENSMUST00000204003	ENSMUSP00000144714	TRANSLATION	protein_coding	-	-	-	652	0	0	0	107.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058537	AW822073	ENSMUST00000075305	ENSMUSP00000074777	TRANSLATION	protein_coding	start	-	-	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020185	E2f7	ENSMUST00000073781	ENSMUSP00000073453	TRANSLATION	protein_coding	-	CCDS36055.1	1	904	0	3.7	1.5	143	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020185	E2f7	ENSMUST00000173294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020185	E2f7	ENSMUST00000174593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020185	E2f7	ENSMUST00000173634	ENSMUSP00000133813	TRANSLATION	protein_coding	-	-	2	140	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020185	E2f7	ENSMUST00000172574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020185	E2f7	ENSMUST00000173471	ENSMUSP00000133494	TRANSLATION	protein_coding	-	CCDS36055.1	1	904	0	3.7	1.5	143	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020185	E2f7	ENSMUST00000174857	ENSMUSP00000133801	TRANSLATION	protein_coding	-	-	1	140	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020185	E2f7	ENSMUST00000174810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020185	E2f7	ENSMUST00000173948	ENSMUSP00000134039	TRANSLATION	nonsense_mediated_decay	start	-	5	219	0	2.7	0	75.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046934	Csl	ENSMUST00000056085	ENSMUSP00000052373	TRANSLATION	protein_coding	-	CCDS24149.1	-	466	23	1	6.3	0	0	-2,0	-	-	14	PRINCIPAL:1
ENSMUSG00000001663	Gstt1	ENSMUST00000139724	ENSMUSP00000117130	TRANSLATION	protein_coding	stop	-	2	126	5	2.5	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001663	Gstt1	ENSMUST00000120177	ENSMUSP00000113839	TRANSLATION	protein_coding	-	-	2	232	9	4.48	0	69.4	0	-4,-7	-	-	15.054	MINOR
ENSMUSG00000001663	Gstt1	ENSMUST00000001713	ENSMUSP00000001713	TRANSLATION	protein_coding	-	CCDS23932.1	1	240	11	5	7.5	76.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000037762	Slc16a9	ENSMUST00000046807	ENSMUSP00000047912	TRANSLATION	protein_coding	-	CCDS23913.1	1	508	0	0	1.5	103.3	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037762	Slc16a9	ENSMUST00000155933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091731	Gm17542	ENSMUST00000169859	ENSMUSP00000127757	TRANSLATION	protein_coding	start/stop	-	5	33	0	0	0	0	0	1,1	-	-	-1	PRINCIPAL:1
ENSMUSG00000035759	Bbs10	ENSMUST00000219990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035759	Bbs10	ENSMUST00000040454	ENSMUSP00000049387	TRANSLATION	protein_coding	-	CCDS48689.1	2	713	0	0.42	1.5	77.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063760	Rnf217	ENSMUST00000081989	ENSMUSP00000080650	TRANSLATION	protein_coding	-	CCDS48531.1	5	515	22	1.18	0.5	67	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048696	Mex3d	ENSMUST00000105350	ENSMUSP00000100987	TRANSLATION	protein_coding	-	CCDS48629.1	1	718	8	0.8	0.5	130.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048696	Mex3d	ENSMUST00000123141	ENSMUSP00000115410	TRANSLATION	protein_coding	start	-	2	268	8	0	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019857	Asf1a	ENSMUST00000219533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019857	Asf1a	ENSMUST00000020004	ENSMUSP00000020004	TRANSLATION	protein_coding	-	CCDS23847.1	1	204	0	4	14.8	239.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019857	Asf1a	ENSMUST00000219282	ENSMUSP00000151729	TRANSLATION	protein_coding	-	-	5	134	0	2	0	120.3	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000019857	Asf1a	ENSMUST00000219271	ENSMUSP00000151324	TRANSLATION	protein_coding	-	-	5	134	0	2	0	120.3	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000019857	Asf1a	ENSMUST00000218043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019857	Asf1a	ENSMUST00000218025	ENSMUSP00000151630	TRANSLATION	protein_coding	start	-	5	118	0	2.24	0	149.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019834	Slc22a16	ENSMUST00000019978	ENSMUSP00000019978	TRANSLATION	protein_coding	-	-	1	670	0	0.92	0	82	13	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000019834	Slc22a16	ENSMUST00000078314	ENSMUSP00000077428	TRANSLATION	protein_coding	-	CCDS23796.1	1	649	0	0.92	0.5	82	13	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000112223	Krtap10-10	ENSMUST00000218843	ENSMUSP00000151758	TRANSLATION	protein_coding	-	-	-	217	0	0	0.5	64.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019797	Mtres1	ENSMUST00000126463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019797	Mtres1	ENSMUST00000214198	-	NO_TRANSLATION	TEC
ENSMUSG00000019797	Mtres1	ENSMUST00000147196	ENSMUSP00000119053	TRANSLATION	protein_coding	-	CCDS23820.1	1	240	0	0	5.1	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000019797	Mtres1	ENSMUST00000152926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025381	Cnpy2	ENSMUST00000026446	ENSMUSP00000026446	TRANSLATION	protein_coding	-	CCDS24272.1	5	182	2	0	2.7	144.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000025381	Cnpy2	ENSMUST00000219836	ENSMUSP00000151502	TRANSLATION	protein_coding	stop	-	3	136	2	0	0	99.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000025381	Cnpy2	ENSMUST00000220391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025381	Cnpy2	ENSMUST00000219037	ENSMUSP00000151918	TRANSLATION	protein_coding	-	CCDS24272.1	1	182	2	0	2.7	144.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000025381	Cnpy2	ENSMUST00000219199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069581	Tspear	ENSMUST00000125241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069581	Tspear	ENSMUST00000092368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069581	Tspear	ENSMUST00000092366	ENSMUSP00000090020	TRANSLATION	protein_coding	-	CCDS83718.1	1	670	0	0	4.1	281	0	3,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000020091	Eif4ebp2	ENSMUST00000020288	ENSMUSP00000020288	TRANSLATION	protein_coding	-	CCDS23879.1	1	120	0	2	7.5	160.3	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000020091	Eif4ebp2	ENSMUST00000167087	ENSMUSP00000131952	TRANSLATION	protein_coding	-	CCDS23879.1	5	120	0	2	7.5	160.3	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000052302	Tbc1d30	ENSMUST00000218111	ENSMUSP00000151497	TRANSLATION	nonsense_mediated_decay	start	-	1	21	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052302	Tbc1d30	ENSMUST00000219354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052302	Tbc1d30	ENSMUST00000219179	ENSMUSP00000151922	TRANSLATION	protein_coding	start/stop	-	3	240	0	0.65	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000052302	Tbc1d30	ENSMUST00000218688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052302	Tbc1d30	ENSMUST00000064107	ENSMUSP00000070488	TRANSLATION	protein_coding	-	CCDS48704.1	1	766	0	3.51	0.5	265.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061961	Olfr815	ENSMUST00000216182	ENSMUSP00000151146	TRANSLATION	protein_coding	-	-	5	310	0	0.42	7.6	152.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000061961	Olfr815	ENSMUST00000071557	ENSMUSP00000071488	TRANSLATION	protein_coding	-	CCDS24342.1	-	316	0	0.42	0.5	152.9	6	-4,-6	-	-	12	MINOR
ENSMUSG00000037370	Enpp1	ENSMUST00000135846	ENSMUSP00000114273	TRANSLATION	protein_coding	-	CCDS78802.1	1	906	14	20.49	1.5	395.1	1	-4,-5	-	-	17.994	ALTERNATIVE:2
ENSMUSG00000037370	Enpp1	ENSMUST00000039882	ENSMUSP00000046090	TRANSLATION	nonsense_mediated_decay	-	-	1	369	3	7.648	0	234.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000037370	Enpp1	ENSMUST00000150570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037370	Enpp1	ENSMUST00000105520	ENSMUSP00000101159	TRANSLATION	protein_coding	-	CCDS35870.1	1	905	14	20.49	1.5	395.2	1	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000037370	Enpp1	ENSMUST00000142974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061589	Dot1l	ENSMUST00000127740	ENSMUSP00000130408	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061589	Dot1l	ENSMUST00000149394	ENSMUSP00000127762	TRANSLATION	nonsense_mediated_decay	start	-	1	424	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061589	Dot1l	ENSMUST00000147579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061589	Dot1l	ENSMUST00000150338	ENSMUSP00000116581	TRANSLATION	protein_coding	start	-	1	1202	3	5.5	0	117.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061589	Dot1l	ENSMUST00000163526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061589	Dot1l	ENSMUST00000138505	ENSMUSP00000119492	TRANSLATION	protein_coding	start	-	1	234	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000061589	Dot1l	ENSMUST00000105336	ENSMUSP00000100973	TRANSLATION	protein_coding	-	CCDS35985.1	1	1540	10	11.33	1.5	276.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019987	Arg1	ENSMUST00000218260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019987	Arg1	ENSMUST00000020161	ENSMUSP00000020161	TRANSLATION	protein_coding	-	CCDS48523.1	1	323	14	7.25	5.1	258.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019987	Arg1	ENSMUST00000220186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063320	1190007I07Rik	ENSMUST00000176200	ENSMUSP00000134868	TRANSLATION	protein_coding	-	CCDS48653.1	2	67	0	0	11.1	89.4	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000063320	1190007I07Rik	ENSMUST00000079648	ENSMUSP00000078593	TRANSLATION	protein_coding	-	CCDS48653.1	1	67	0	0	11.1	89.4	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000063320	1190007I07Rik	ENSMUST00000185168	ENSMUSP00000139244	TRANSLATION	protein_coding	-	CCDS48653.1	2	67	0	0	11.1	89.4	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000063320	1190007I07Rik	ENSMUST00000183363	ENSMUSP00000139234	TRANSLATION	protein_coding	-	CCDS48653.1	1	67	0	0	11.1	89.4	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000063320	1190007I07Rik	ENSMUST00000183416	ENSMUSP00000139041	TRANSLATION	protein_coding	-	-	2	75	0	0	0	69.9	0	0,-3	-	-	4.692	MINOR
ENSMUSG00000033444	Specc1l	ENSMUST00000219387	ENSMUSP00000151552	TRANSLATION	protein_coding	stop	-	2	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033444	Specc1l	ENSMUST00000105421	ENSMUSP00000101061	TRANSLATION	protein_coding	-	CCDS48598.1	5	1135	0	3.32	0.5	71.6	0	-4,-7	-	-	12	MINOR
ENSMUSG00000033444	Specc1l	ENSMUST00000218766	ENSMUSP00000151322	TRANSLATION	protein_coding	-	CCDS48599.1	1	1118	0	3.32	6.3	71.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000033444	Specc1l	ENSMUST00000040105	ENSMUSP00000045099	TRANSLATION	protein_coding	-	CCDS48598.1	5	1135	0	3.32	0.5	71.6	0	-4,-7	-	-	12	MINOR
ENSMUSG00000033444	Specc1l	ENSMUST00000218644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033444	Specc1l	ENSMUST00000219430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033444	Specc1l	ENSMUST00000218876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032834	Pwp2	ENSMUST00000042556	ENSMUSP00000045812	TRANSLATION	protein_coding	-	CCDS35958.1	1	919	0	6.89	2.9	163.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019806	Aig1	ENSMUST00000105534	ENSMUSP00000101174	TRANSLATION	protein_coding	-	-	5	180	0	0	0	200.9	4	-2,-5	-	-	2.958	MINOR
ENSMUSG00000019806	Aig1	ENSMUST00000161729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019806	Aig1	ENSMUST00000162610	ENSMUSP00000125366	TRANSLATION	protein_coding	-	CCDS83682.1	1	238	0	0	9	251.6	8	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000019806	Aig1	ENSMUST00000162869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019806	Aig1	ENSMUST00000162798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019806	Aig1	ENSMUST00000162174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019806	Aig1	ENSMUST00000019942	ENSMUSP00000019942	TRANSLATION	protein_coding	-	CCDS23703.1	1	262	0	0	0.5	251.6	8	-2,-5	-	-	6	MINOR
ENSMUSG00000034932	Mrpl54	ENSMUST00000046114	ENSMUSP00000039951	TRANSLATION	protein_coding	-	CCDS24049.1	1	135	0	2.2	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000034932	Mrpl54	ENSMUST00000145452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090112	Shprh	ENSMUST00000159810	ENSMUSP00000125457	TRANSLATION	nonsense_mediated_decay	-	-	1	1031	11	3.13	0	495.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090112	Shprh	ENSMUST00000161910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090112	Shprh	ENSMUST00000160461	ENSMUSP00000125127	TRANSLATION	nonsense_mediated_decay	start	-	3	218	8	0.6	0	69.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090112	Shprh	ENSMUST00000159541	ENSMUSP00000132870	TRANSLATION	protein_coding	-	CCDS70003.1	1	1646	19	13.63	0.5	526.2	0	-4,-7	-	-	16.542	MINOR
ENSMUSG00000090112	Shprh	ENSMUST00000159553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090112	Shprh	ENSMUST00000044053	ENSMUSP00000039422	TRANSLATION	protein_coding	-	CCDS35838.1	1	1674	19	14.36	0.5	526.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000090112	Shprh	ENSMUST00000054814	ENSMUSP00000125849	TRANSLATION	protein_coding	-	CCDS35839.1	1	1616	19	13.43	0.5	526.2	0	-4,-7	-	-	16.14	MINOR
ENSMUSG00000090112	Shprh	ENSMUST00000161858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090247	Bloc1s1	ENSMUST00000141320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090247	Bloc1s1	ENSMUST00000131271	ENSMUSP00000114321	TRANSLATION	protein_coding	-	-	5	121	0	0	0	146.3	0	-4,-6	-	-	4.992	MINOR
ENSMUSG00000090247	Bloc1s1	ENSMUST00000153731	ENSMUSP00000117408	TRANSLATION	protein_coding	-	-	5	94	0	0	0	107.7	0	-4,-7	-	-	2.676	MINOR
ENSMUSG00000090247	Bloc1s1	ENSMUST00000026405	ENSMUSP00000026405	TRANSLATION	protein_coding	-	CCDS24299.1	1	125	0	0	14.6	163.1	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000090247	Bloc1s1	ENSMUST00000143628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078442	Ccdc105	ENSMUST00000105383	ENSMUSP00000101022	TRANSLATION	protein_coding	-	CCDS48614.1	1	499	0	0	1.5	58.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035504	Reep6	ENSMUST00000186864	ENSMUSP00000140840	TRANSLATION	protein_coding	-	CCDS35979.1	1	201	0	0	0.5	91.5	5	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000035504	Reep6	ENSMUST00000105358	ENSMUSP00000100995	TRANSLATION	protein_coding	-	-	1	599	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000035504	Reep6	ENSMUST00000040081	ENSMUSP00000043722	TRANSLATION	protein_coding	-	-	5	124	0	0	0	63.8	5	-4,-7	-	-	4.182	MINOR
ENSMUSG00000035504	Reep6	ENSMUST00000153167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035504	Reep6	ENSMUST00000105354	ENSMUSP00000100991	TRANSLATION	protein_coding	-	CCDS35979.1	1	201	0	0	0.5	91.5	5	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000035504	Reep6	ENSMUST00000105355	ENSMUSP00000100992	TRANSLATION	protein_coding	-	CCDS56735.1	1	174	0	0	0.5	91.5	5	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000035504	Reep6	ENSMUST00000105357	ENSMUSP00000100994	TRANSLATION	protein_coding	-	-	1	572	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000053329	Gatd3a	ENSMUST00000001242	ENSMUSP00000001242	TRANSLATION	protein_coding	-	CCDS35957.1	1	266	0	4.87	3.9	0	0	-2,0	-	-	7	PRINCIPAL:1
ENSMUSG00000053329	Gatd3a	ENSMUST00000220359	ENSMUSP00000151954	TRANSLATION	protein_coding	start	-	2	116	0	1.62	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053329	Gatd3a	ENSMUST00000218286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053329	Gatd3a	ENSMUST00000219504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053329	Gatd3a	ENSMUST00000219120	ENSMUSP00000151605	TRANSLATION	protein_coding	stop	-	2	195	0	3.07	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000167689	ENSMUSP00000133238	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000165778	ENSMUSP00000133165	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000172158	ENSMUSP00000129732	TRANSLATION	protein_coding	-	-	5	264	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000170950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042570	Mier2	ENSMUST00000167183	ENSMUSP00000126131	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000165028	ENSMUSP00000127387	TRANSLATION	protein_coding	-	CCDS83723.1	1	541	4	2.87	1.5	31.9	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000042570	Mier2	ENSMUST00000165866	ENSMUSP00000127332	TRANSLATION	protein_coding	stop	-	2	195	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000167760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042570	Mier2	ENSMUST00000168601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042570	Mier2	ENSMUST00000164895	ENSMUSP00000127532	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000170018	ENSMUSP00000130460	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042570	Mier2	ENSMUST00000062855	ENSMUSP00000059864	TRANSLATION	protein_coding	-	CCDS48619.1	1	539	4	2.87	0.5	31.9	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000000902	Smarcb1	ENSMUST00000121304	ENSMUSP00000112463	TRANSLATION	protein_coding	-	CCDS48602.1	1	376	0	3.33	12.2	0	0	-4,-5	-	-	9.34	ALTERNATIVE:1
ENSMUSG00000000902	Smarcb1	ENSMUST00000133189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000902	Smarcb1	ENSMUST00000140408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000902	Smarcb1	ENSMUST00000140388	ENSMUSP00000123093	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000902	Smarcb1	ENSMUST00000000925	ENSMUSP00000000925	TRANSLATION	protein_coding	-	CCDS23936.1	1	385	0	3.66	7.5	0	0	-4,-6	-	-	8.32	PRINCIPAL:3
ENSMUSG00000000902	Smarcb1	ENSMUST00000146555	ENSMUSP00000115388	TRANSLATION	nonsense_mediated_decay	start	-	5	55	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112170	Gm9508	ENSMUST00000220084	ENSMUSP00000151808	TRANSLATION	protein_coding	-	-	-	230	0	0	0.5	54.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000009291	Pttg1ip	ENSMUST00000159116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009291	Pttg1ip	ENSMUST00000162895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009291	Pttg1ip	ENSMUST00000218797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009291	Pttg1ip	ENSMUST00000162429	ENSMUSP00000124457	TRANSLATION	protein_coding	-	-	2	120	0	0	0	0	4	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000009291	Pttg1ip	ENSMUST00000162943	ENSMUSP00000124313	TRANSLATION	protein_coding	-	-	3	111	0	0	0.5	0	4	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000009291	Pttg1ip	ENSMUST00000167006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009291	Pttg1ip	ENSMUST00000161789	ENSMUSP00000125094	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000009291	Pttg1ip	ENSMUST00000161165	ENSMUSP00000124774	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000009291	Pttg1ip	ENSMUST00000009435	ENSMUSP00000009435	TRANSLATION	protein_coding	-	CCDS23957.1	1	174	0	0	1.5	0	4	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000009291	Pttg1ip	ENSMUST00000162598	ENSMUSP00000124652	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000047669	Msl3l2	ENSMUST00000217668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047669	Msl3l2	ENSMUST00000063138	ENSMUSP00000051220	TRANSLATION	protein_coding	-	CCDS48561.1	1	371	0	0.4	1.5	195.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019828	Grm1	ENSMUST00000135120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019828	Grm1	ENSMUST00000105560	ENSMUSP00000101189	TRANSLATION	protein_coding	-	CCDS48499.1	1	906	23	7	5.1	564	7	0,-3	-	-	14.69	MINOR
ENSMUSG00000019828	Grm1	ENSMUST00000105561	ENSMUSP00000101190	TRANSLATION	protein_coding	-	CCDS48499.1	1	906	23	7	5.1	564	7	0,-3	-	-	14.69	MINOR
ENSMUSG00000019828	Grm1	ENSMUST00000156826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019828	Grm1	ENSMUST00000044306	ENSMUSP00000037255	TRANSLATION	protein_coding	-	CCDS23696.1	1	1199	23	7	1.5	652.5	7	0,-3	-	-	18.244	PRINCIPAL:1
ENSMUSG00000019828	Grm1	ENSMUST00000155772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036099	Vezt	ENSMUST00000148450	ENSMUSP00000121105	TRANSLATION	protein_coding	start	-	3	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000132735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036099	Vezt	ENSMUST00000047711	ENSMUSP00000037955	TRANSLATION	protein_coding	-	CCDS36038.1	1	780	0	0	0.5	308	1	-4,-5	-	-	6	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000150344	ENSMUSP00000122561	TRANSLATION	protein_coding	start/stop	-	3	231	0	0	0	36.4	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000141241	ENSMUSP00000123575	TRANSLATION	nonsense_mediated_decay	start	-	3	98	0	0	0	110.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000119818	ENSMUSP00000113715	TRANSLATION	protein_coding	-	CCDS78887.1	1	784	0	0	0.5	301.8	1	-4,-5	-	-	5.628	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000118077	ENSMUSP00000113983	TRANSLATION	protein_coding	-	CCDS78886.1	1	617	0	0	5.1	308	1	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000036099	Vezt	ENSMUST00000150704	ENSMUSP00000121727	TRANSLATION	nonsense_mediated_decay	-	-	1	276	0	0	0	88.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000118205	ENSMUSP00000113321	TRANSLATION	protein_coding	-	CCDS83750.1	1	639	0	0	0.5	308	1	-4,-5	-	-	6	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000123201	ENSMUSP00000114550	TRANSLATION	protein_coding	stop	-	3	190	0	0	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036099	Vezt	ENSMUST00000154267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004934	Pias4	ENSMUST00000005064	ENSMUSP00000005064	TRANSLATION	protein_coding	-	CCDS35992.1	1	507	4	7.7188	1.5	187.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000004934	Pias4	ENSMUST00000147436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004934	Pias4	ENSMUST00000135765	ENSMUSP00000121361	TRANSLATION	protein_coding	start/stop	-	1	71	0	1.5198	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000004934	Pias4	ENSMUST00000134017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004934	Pias4	ENSMUST00000129549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000130285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000141048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000127788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000148096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000176675	ENSMUSP00000135672	TRANSLATION	nonsense_mediated_decay	start	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020263	Appl2	ENSMUST00000176294	ENSMUSP00000135645	TRANSLATION	protein_coding	stop	-	3	95	0	3	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020263	Appl2	ENSMUST00000133719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020263	Appl2	ENSMUST00000150351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000147118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020263	Appl2	ENSMUST00000177187	ENSMUSP00000135157	TRANSLATION	protein_coding	start	-	5	67	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020263	Appl2	ENSMUST00000147582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020263	Appl2	ENSMUST00000146876	ENSMUSP00000121336	TRANSLATION	protein_coding	stop	-	5	209	0	6.08	0	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020263	Appl2	ENSMUST00000020500	ENSMUSP00000020500	TRANSLATION	protein_coding	-	CCDS24078.1	1	662	0	13.06	6.5	281.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020263	Appl2	ENSMUST00000150685	ENSMUSP00000115903	TRANSLATION	nonsense_mediated_decay	-	-	3	117	0	3	0	84.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019848	Popdc3	ENSMUST00000175658	ENSMUSP00000135373	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	89.1	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000019848	Popdc3	ENSMUST00000161803	ENSMUSP00000125532	TRANSLATION	protein_coding	-	-	1	171	0	0	0	121.1	6	-4,-7	-	-	4.002	MINOR
ENSMUSG00000019848	Popdc3	ENSMUST00000019994	ENSMUSP00000019994	TRANSLATION	protein_coding	-	CCDS23827.1	1	291	0	0	8.8	154.4	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000020111	Micu1	ENSMUST00000171409	ENSMUSP00000131000	TRANSLATION	protein_coding	stop	-	3	234	5	5.1	0	28	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000020111	Micu1	ENSMUST00000165563	ENSMUSP00000126597	TRANSLATION	protein_coding	-	CCDS35909.1	1	477	10	10.1	7.5	51.6	1	-4,-2	-	-	20.295	PRINCIPAL:3
ENSMUSG00000020111	Micu1	ENSMUST00000020311	ENSMUSP00000020311	TRANSLATION	protein_coding	-	CCDS78817.1	5	483	10	10.1	9.5	51.6	1	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000020111	Micu1	ENSMUST00000179709	ENSMUSP00000136567	TRANSLATION	protein_coding	-	CCDS35909.1	1	477	10	10.1	7.5	51.6	1	-4,-2	-	-	20.295	PRINCIPAL:3
ENSMUSG00000020111	Micu1	ENSMUST00000169842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020111	Micu1	ENSMUST00000170952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020111	Micu1	ENSMUST00000167612	ENSMUSP00000126822	TRANSLATION	protein_coding	start	-	3	78	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020111	Micu1	ENSMUST00000092508	ENSMUSP00000090166	TRANSLATION	protein_coding	-	CCDS78818.1	1	481	10	10.1	7.5	51.6	1	-4,-2	-	-	20.295	ALTERNATIVE:1
ENSMUSG00000020111	Micu1	ENSMUST00000172034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020111	Micu1	ENSMUST00000166565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020111	Micu1	ENSMUST00000167872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020111	Micu1	ENSMUST00000165405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035397	Klf16	ENSMUST00000038558	ENSMUSP00000048825	TRANSLATION	protein_coding	-	CCDS24026.1	1	251	12	1	1.5	49.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000000730	Dnmt3l	ENSMUST00000139539	ENSMUSP00000117827	TRANSLATION	protein_coding	-	CCDS70061.1	1	126	0	2.75	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000000730	Dnmt3l	ENSMUST00000135316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000730	Dnmt3l	ENSMUST00000144446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000730	Dnmt3l	ENSMUST00000000746	ENSMUSP00000000746	TRANSLATION	protein_coding	-	CCDS23962.1	1	421	12	8.975	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000730	Dnmt3l	ENSMUST00000138785	ENSMUSP00000121562	TRANSLATION	protein_coding	-	CCDS23962.1	1	421	12	8.975	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000730	Dnmt3l	ENSMUST00000131825	ENSMUSP00000119571	TRANSLATION	protein_coding	-	CCDS70061.1	1	126	0	2.75	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000000730	Dnmt3l	ENSMUST00000123940	ENSMUSP00000123015	TRANSLATION	protein_coding	-	CCDS70061.1	1	126	0	2.75	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000000730	Dnmt3l	ENSMUST00000151242	ENSMUSP00000116970	TRANSLATION	protein_coding	-	CCDS23962.1	1	421	12	8.975	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063173	Olfr811	ENSMUST00000216283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063173	Olfr811	ENSMUST00000217571	ENSMUSP00000149970	TRANSLATION	protein_coding	-	CCDS24338.1	5	319	0	0.28	2.7	174.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063173	Olfr811	ENSMUST00000076437	ENSMUSP00000075768	TRANSLATION	protein_coding	-	CCDS24338.1	-	319	0	0.28	2.7	174.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063173	Olfr811	ENSMUST00000215058	ENSMUSP00000148915	TRANSLATION	protein_coding	-	CCDS24338.1	5	319	0	0.28	2.7	174.3	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019897	Ccdc59	ENSMUST00000020049	ENSMUSP00000020049	TRANSLATION	protein_coding	-	CCDS24158.1	1	240	0	0	0.5	35.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000019897	Ccdc59	ENSMUST00000133538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019897	Ccdc59	ENSMUST00000155406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000188930	ENSMUSP00000140459	TRANSLATION	protein_coding	stop	-	5	105	4	0	0	42.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000218464	ENSMUSP00000151731	TRANSLATION	protein_coding	-	CCDS36047.1	5	415	4	0	5.1	42.6	0	-4,-5	-	-	3.002	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000190708	ENSMUSP00000139797	TRANSLATION	protein_coding	-	-	5	469	12	0	4.6	135.5	0	-4,-5	-	-	13.666	PRINCIPAL:1
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000187119	ENSMUSP00000141032	TRANSLATION	protein_coding	-	-	5	374	4	0	1.2	42.6	0	-4,-5	-	-	1.1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000191336	ENSMUSP00000140717	TRANSLATION	protein_coding	stop	-	5	195	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000188736	ENSMUSP00000140726	TRANSLATION	protein_coding	-	-	5	414	4	0	5.1	42.6	0	-4,-5	-	-	3.002	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000190386	ENSMUSP00000140022	TRANSLATION	protein_coding	-	-	5	375	4	0	1.2	42.6	0	-4,-5	-	-	1.1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000186825	ENSMUSP00000140291	TRANSLATION	nonsense_mediated_decay	-	-	5	101	12	0	0	137	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000191033	ENSMUSP00000139857	TRANSLATION	protein_coding	start	-	5	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056912	1700017N19Rik	ENSMUST00000041162	ENSMUSP00000042828	TRANSLATION	protein_coding	-	CCDS36047.1	1	415	4	0	5.1	42.6	0	-4,-5	-	-	3.002	MINOR
ENSMUSG00000100186	Taar8b	ENSMUST00000092654	ENSMUSP00000090324	TRANSLATION	protein_coding	-	CCDS23746.1	-	344	0	0.6	5.1	186	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000019933	Mrln	ENSMUST00000189468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019933	Mrln	ENSMUST00000020090	ENSMUSP00000150523	TRANSLATION	protein_coding	-	-	2	46	0	0	7.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000019933	Mrln	ENSMUST00000188568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019933	Mrln	ENSMUST00000187318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019933	Mrln	ENSMUST00000190199	ENSMUSP00000149291	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060044	Tmem26	ENSMUST00000080995	ENSMUSP00000079789	TRANSLATION	protein_coding	-	CCDS23906.1	1	366	0	0	1.5	404.1	3	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000060044	Tmem26	ENSMUST00000219392	ENSMUSP00000151950	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	81.4	2	0,-3	-	-	-1	MINOR
ENSMUSG00000060044	Tmem26	ENSMUST00000218918	ENSMUSP00000151512	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	0	0	135.8	3	0,-3	-	-	-1	MINOR
ENSMUSG00000039914	Coq10a	ENSMUST00000218507	ENSMUSP00000151526	TRANSLATION	nonsense_mediated_decay	start	-	3	41	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039914	Coq10a	ENSMUST00000220227	ENSMUSP00000151645	TRANSLATION	protein_coding	-	-	5	249	0	2.145	1.5	86.7	0	-1,3	-	-	12	ALTERNATIVE:2
ENSMUSG00000039914	Coq10a	ENSMUST00000219934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039914	Coq10a	ENSMUST00000220111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039914	Coq10a	ENSMUST00000219815	ENSMUSP00000152045	TRANSLATION	protein_coding	stop	-	2	47	0	0.6	0	24.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039914	Coq10a	ENSMUST00000220027	ENSMUSP00000151609	TRANSLATION	protein_coding	-	-	5	217	0	2.145	1.5	86.7	0	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039914	Coq10a	ENSMUST00000043211	ENSMUSP00000036213	TRANSLATION	protein_coding	-	CCDS36089.1	5	259	0	2.145	0.5	85.2	0	-1,3	-	-	11.898	PRINCIPAL:2
ENSMUSG00000062866	Phactr2	ENSMUST00000079698	ENSMUSP00000078637	TRANSLATION	protein_coding	-	-	5	556	0	3.8	0.5	105.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000062866	Phactr2	ENSMUST00000105543	ENSMUSP00000101182	TRANSLATION	protein_coding	-	CCDS35846.1	1	563	0	3.8	0.5	105.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000062866	Phactr2	ENSMUST00000105546	ENSMUSP00000101185	TRANSLATION	protein_coding	-	-	5	632	0	3.8	0.5	105.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000062866	Phactr2	ENSMUST00000154265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062866	Phactr2	ENSMUST00000105545	ENSMUSP00000101184	TRANSLATION	protein_coding	-	-	1	626	0	3.8	0.5	105.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020092	Pald1	ENSMUST00000219240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020092	Pald1	ENSMUST00000219132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020092	Pald1	ENSMUST00000020289	ENSMUSP00000020289	TRANSLATION	protein_coding	-	CCDS23877.1	1	859	14	0.76	2.7	203.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069515	Lyz1	ENSMUST00000092162	ENSMUSP00000089800	TRANSLATION	protein_coding	-	CCDS48695.1	1	148	21	3.5	9.6	190.8	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000049764	Zfp280b	ENSMUST00000061617	ENSMUSP00000056340	TRANSLATION	protein_coding	-	CCDS23942.1	1	534	18	0	1.5	122.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049764	Zfp280b	ENSMUST00000218627	ENSMUSP00000152008	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020075	Ddx21	ENSMUST00000218393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020075	Ddx21	ENSMUST00000220060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020075	Ddx21	ENSMUST00000045866	ENSMUSP00000042691	TRANSLATION	protein_coding	-	CCDS23891.1	1	851	15	9.63	0.5	357.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019818	Cd164	ENSMUST00000187279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019818	Cd164	ENSMUST00000189300	ENSMUSP00000139583	TRANSLATION	protein_coding	start	-	1	162	0	0	0	198.8	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000019818	Cd164	ENSMUST00000019962	ENSMUSP00000019962	TRANSLATION	protein_coding	-	CCDS23806.1	1	197	0	0	0.5	198.8	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000019818	Cd164	ENSMUST00000186388	ENSMUSP00000150041	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000039824	Myl6b	ENSMUST00000026428	ENSMUSP00000026428	TRANSLATION	protein_coding	-	CCDS24279.1	1	207	8	3.55	1.7	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039824	Myl6b	ENSMUST00000218250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000295	Hddc2	ENSMUST00000159659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000295	Hddc2	ENSMUST00000159194	ENSMUSP00000124106	TRANSLATION	nonsense_mediated_decay	start	-	5	127	3	2.81	0	122.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000295	Hddc2	ENSMUST00000160447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000295	Hddc2	ENSMUST00000162076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000295	Hddc2	ENSMUST00000000304	ENSMUSP00000000304	TRANSLATION	protein_coding	-	CCDS23767.1	1	199	4	5.15	3.5	166.9	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000043259	Fam13c	ENSMUST00000173042	ENSMUSP00000134648	TRANSLATION	protein_coding	-	CCDS56709.1	1	600	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043259	Fam13c	ENSMUST00000220159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043259	Fam13c	ENSMUST00000218542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043259	Fam13c	ENSMUST00000062883	ENSMUSP00000051375	TRANSLATION	protein_coding	-	CCDS35932.1	1	601	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000043259	Fam13c	ENSMUST00000105436	ENSMUSP00000101076	TRANSLATION	protein_coding	-	CCDS48592.1	5	519	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000043259	Fam13c	ENSMUST00000220442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043259	Fam13c	ENSMUST00000219514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020177	9530003J23Rik	ENSMUST00000020392	ENSMUSP00000020392	TRANSLATION	protein_coding	-	CCDS24192.1	1	151	7	3.3	0.5	159.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020177	9530003J23Rik	ENSMUST00000159193	ENSMUSP00000125436	TRANSLATION	protein_coding	-	CCDS24192.1	1	151	7	3.3	0.5	159.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035262	Amh	ENSMUST00000036016	ENSMUSP00000043153	TRANSLATION	protein_coding	-	CCDS24033.1	1	554	0	0.2	1.5	489.4	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000058298	Mcm9	ENSMUST00000219841	ENSMUSP00000151878	TRANSLATION	protein_coding	start	-	5	98	10	1.9	0	83.6	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000058298	Mcm9	ENSMUST00000220007	ENSMUSP00000151956	TRANSLATION	protein_coding	-	-	1	552	0	0.88	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000058298	Mcm9	ENSMUST00000218549	ENSMUSP00000151893	TRANSLATION	protein_coding	-	-	1	414	13	4.14	0	148.9	0	-4,-5	-	-	5.592	MINOR
ENSMUSG00000058298	Mcm9	ENSMUST00000075540	ENSMUSP00000074978	TRANSLATION	protein_coding	-	CCDS23846.1	2	1290	14	7.01	0.5	426.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000058298	Mcm9	ENSMUST00000219547	ENSMUSP00000151573	TRANSLATION	protein_coding	-	-	1	552	0	0.88	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000058298	Mcm9	ENSMUST00000237608	ENSMUSP00000157761	TRANSLATION	protein_coding	-	-	-	1134	14	7.01	0.5	426.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000058298	Mcm9	ENSMUST00000219838	ENSMUSP00000151639	TRANSLATION	protein_coding	-	-	5	386	13	3.69	2.7	165.5	0	-4,-5	-	-	5.334	MINOR
ENSMUSG00000058298	Mcm9	ENSMUST00000220260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037868	Egr2	ENSMUST00000145936	ENSMUSP00000115709	TRANSLATION	protein_coding	stop	-	3	281	0	0	0	89.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037868	Egr2	ENSMUST00000145754	ENSMUSP00000116621	TRANSLATION	protein_coding	stop	-	2	236	0	0	0	89.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037868	Egr2	ENSMUST00000105438	ENSMUSP00000101078	TRANSLATION	protein_coding	-	CCDS83706.1	1	420	12	1	2.7	156.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000037868	Egr2	ENSMUST00000130933	ENSMUSP00000116502	TRANSLATION	protein_coding	stop	-	2	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037868	Egr2	ENSMUST00000048289	ENSMUSP00000041053	TRANSLATION	protein_coding	-	CCDS35927.2	1	470	12	1	1.5	156.4	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000037868	Egr2	ENSMUST00000146986	ENSMUSP00000118941	TRANSLATION	protein_coding	stop	-	2	72	0	0	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037868	Egr2	ENSMUST00000127820	ENSMUSP00000116799	TRANSLATION	protein_coding	-	-	5	412	12	1	1	156.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025351	Cd63	ENSMUST00000219317	ENSMUSP00000151313	TRANSLATION	protein_coding	-	CCDS24297.1	5	238	0	3.165	3.9	180	5	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025351	Cd63	ENSMUST00000218450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025351	Cd63	ENSMUST00000026407	ENSMUSP00000026407	TRANSLATION	protein_coding	-	CCDS24297.1	1	238	0	3.165	3.9	180	5	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025351	Cd63	ENSMUST00000220245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025351	Cd63	ENSMUST00000105229	ENSMUSP00000100862	TRANSLATION	protein_coding	-	CCDS24297.1	1	238	0	3.165	3.9	180	5	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025351	Cd63	ENSMUST00000220308	ENSMUSP00000151955	TRANSLATION	protein_coding	stop	-	3	164	0	2.49	0	131	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000040054	Baz2a	ENSMUST00000219980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040054	Baz2a	ENSMUST00000219072	ENSMUSP00000151308	TRANSLATION	protein_coding	stop	-	1	763	0	3.35	0	72.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040054	Baz2a	ENSMUST00000170054	ENSMUSP00000129803	TRANSLATION	protein_coding	-	-	5	1888	8	5.55	0.5	273.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040054	Baz2a	ENSMUST00000238829	ENSMUSP00000159065	TRANSLATION	protein_coding	-	-	-	1889	8	5.55	0.5	273.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040054	Baz2a	ENSMUST00000220049	ENSMUSP00000151961	TRANSLATION	protein_coding	-	CCDS36088.1	5	1887	8	5.55	0.5	273.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000040054	Baz2a	ENSMUST00000217851	ENSMUSP00000151445	TRANSLATION	protein_coding	-	-	5	1890	8	5.55	0.5	273.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040054	Baz2a	ENSMUST00000045621	ENSMUSP00000044359	TRANSLATION	protein_coding	-	CCDS36088.1	5	1887	8	5.55	0.5	273.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000040054	Baz2a	ENSMUST00000218772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040054	Baz2a	ENSMUST00000219082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020022	Ndufa12	ENSMUST00000179990	ENSMUSP00000136313	TRANSLATION	protein_coding	-	CCDS24132.1	1	149	0	3.25	0.5	102.5	0	-4,-7	-	-	12	MINOR
ENSMUSG00000020022	Ndufa12	ENSMUST00000020209	ENSMUSP00000020209	TRANSLATION	protein_coding	-	-	1	145	0	3.25	7	102.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020022	Ndufa12	ENSMUST00000135292	ENSMUSP00000119625	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	2.25	0	45	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020022	Ndufa12	ENSMUST00000125379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019792	Trmt11	ENSMUST00000216790	ENSMUSP00000149782	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019792	Trmt11	ENSMUST00000019927	ENSMUSP00000019927	TRANSLATION	protein_coding	-	CCDS23763.1	1	460	19	2.195	8.8	46.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000019792	Trmt11	ENSMUST00000216638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019792	Trmt11	ENSMUST00000215041	ENSMUSP00000151084	TRANSLATION	nonsense_mediated_decay	start	-	5	112	4	0.72	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019792	Trmt11	ENSMUST00000216705	ENSMUSP00000149246	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019792	Trmt11	ENSMUST00000215595	ENSMUSP00000149835	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049573	Olfr780	ENSMUST00000215503	ENSMUSP00000149258	TRANSLATION	protein_coding	-	CCDS24313.1	5	312	0	0.42	6.4	154.3	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049573	Olfr780	ENSMUST00000063168	ENSMUSP00000054927	TRANSLATION	protein_coding	-	CCDS24313.1	-	312	0	0.42	6.4	154.3	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000071253	Slc25a16	ENSMUST00000144459	ENSMUSP00000114510	TRANSLATION	protein_coding	stop	-	5	322	15	4.78	0	212.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000071253	Slc25a16	ENSMUST00000044977	ENSMUSP00000043370	TRANSLATION	protein_coding	-	CCDS23893.1	1	332	15	5.18	1.5	238.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071253	Slc25a16	ENSMUST00000138597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071253	Slc25a16	ENSMUST00000152350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020062	Slc5a8	ENSMUST00000020255	ENSMUSP00000020255	TRANSLATION	protein_coding	-	CCDS36026.1	1	611	0	3.88	7.5	124.2	0	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019874	Fabp7	ENSMUST00000020024	ENSMUSP00000020024	TRANSLATION	protein_coding	-	CCDS23856.1	1	132	19	3.25	21.5	87.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019874	Fabp7	ENSMUST00000165013	ENSMUSP00000131415	TRANSLATION	protein_coding	-	-	2	188	18	2.75	0	83.1	0	-4,-5	-	-	16.008	MINOR
ENSMUSG00000033427	Upb1	ENSMUST00000138058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033427	Upb1	ENSMUST00000132629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033427	Upb1	ENSMUST00000129946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033427	Upb1	ENSMUST00000219052	ENSMUSP00000151804	TRANSLATION	protein_coding	stop	-	3	150	1	2.55	0	23.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033427	Upb1	ENSMUST00000039925	ENSMUSP00000049342	TRANSLATION	protein_coding	-	CCDS23925.1	1	393	4	8.73	1.5	204.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019920	Lims1	ENSMUST00000020077	ENSMUSP00000020077	TRANSLATION	protein_coding	-	CCDS56703.1	1	396	33	7.25	7.6	240	0	-4,-5	-	-	20.019	ALTERNATIVE:1
ENSMUSG00000019920	Lims1	ENSMUST00000238939	ENSMUSP00000158997	TRANSLATION	protein_coding	-	-	-	362	33	7.25	10.8	238.9	0	-4,-1	-	-	20.934	ALTERNATIVE:1
ENSMUSG00000019920	Lims1	ENSMUST00000124312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019920	Lims1	ENSMUST00000148799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019920	Lims1	ENSMUST00000105468	ENSMUSP00000101108	TRANSLATION	protein_coding	-	CCDS83697.1	1	387	33	7.25	7.6	238.9	0	-4,-5	-	-	19.953	ALTERNATIVE:1
ENSMUSG00000019920	Lims1	ENSMUST00000020078	ENSMUSP00000020078	TRANSLATION	protein_coding	-	CCDS23860.1	1	337	33	7.25	9.8	238.9	0	-4,-6	-	-	20.628	PRINCIPAL:3
ENSMUSG00000020063	Sirt1	ENSMUST00000020257	ENSMUSP00000020257	TRANSLATION	protein_coding	-	CCDS23898.1	1	737	34	6.55	0.5	208.5	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020063	Sirt1	ENSMUST00000105442	ENSMUSP00000101082	TRANSLATION	protein_coding	-	CCDS48585.1	1	698	34	5.55	0.5	208.5	0	-3,-5	-	-	16.002	MINOR
ENSMUSG00000020063	Sirt1	ENSMUST00000146028	ENSMUSP00000117819	TRANSLATION	nonsense_mediated_decay	start	-	5	140	11	2	0	48.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020063	Sirt1	ENSMUST00000148516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020063	Sirt1	ENSMUST00000177694	ENSMUSP00000137565	TRANSLATION	protein_coding	-	-	5	553	28	5.75	0	208.5	0	-3,-5	-	-	12.396	MINOR
ENSMUSG00000020063	Sirt1	ENSMUST00000120239	ENSMUSP00000112595	TRANSLATION	protein_coding	-	CCDS23898.1	5	737	34	6.55	0.5	208.5	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020063	Sirt1	ENSMUST00000131371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080115	Eef1akmt3	ENSMUST00000116231	ENSMUSP00000111939	TRANSLATION	protein_coding	-	CCDS56752.1	5	232	15	3	0.5	125.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020329	Polrmt	ENSMUST00000162687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000159082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000162694	ENSMUSP00000124556	TRANSLATION	nonsense_mediated_decay	-	-	1	903	1	9.64	0	292.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020329	Polrmt	ENSMUST00000161765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000020580	ENSMUSP00000020580	TRANSLATION	protein_coding	-	CCDS23987.1	1	1207	4	17.695	1.5	730	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000020329	Polrmt	ENSMUST00000160838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000160595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020329	Polrmt	ENSMUST00000161662	ENSMUSP00000124230	TRANSLATION	protein_coding	start	-	5	393	3	8.725	0	329.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020329	Polrmt	ENSMUST00000159289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000159016	ENSMUSP00000124936	TRANSLATION	protein_coding	-	-	1	1133	4	16.695	0	638.8	0	-4,0	-	-	8.53	MINOR
ENSMUSG00000020329	Polrmt	ENSMUST00000161375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020329	Polrmt	ENSMUST00000161098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020329	Polrmt	ENSMUST00000162679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020214	Glipr1l2	ENSMUST00000148897	ENSMUSP00000122771	TRANSLATION	protein_coding	-	CCDS83755.1	1	226	0	2.95	0.5	61.4	0	-2,0	-	-	11.472	ALTERNATIVE:2
ENSMUSG00000020214	Glipr1l2	ENSMUST00000020434	ENSMUSP00000020434	TRANSLATION	protein_coding	-	CCDS24171.1	1	332	0	3.214	0.5	61.4	0	-2,0	-	-	12	PRINCIPAL:3
ENSMUSG00000036955	Kifbp	ENSMUST00000160228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036955	Kifbp	ENSMUST00000162525	ENSMUSP00000125162	TRANSLATION	protein_coding	-	-	5	293	0	0	0	49	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036955	Kifbp	ENSMUST00000159722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036955	Kifbp	ENSMUST00000162648	ENSMUSP00000125070	TRANSLATION	nonsense_mediated_decay	start	-	1	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036955	Kifbp	ENSMUST00000159704	ENSMUSP00000134770	TRANSLATION	protein_coding	-	-	1	384	0	0	0	94.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036955	Kifbp	ENSMUST00000162759	ENSMUSP00000125236	TRANSLATION	protein_coding	start	-	5	142	0	0	0	86.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036955	Kifbp	ENSMUST00000065887	ENSMUSP00000065160	TRANSLATION	protein_coding	-	CCDS23890.1	1	617	0	0	7.5	401.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036955	Kifbp	ENSMUST00000162263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036955	Kifbp	ENSMUST00000208223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004356	Utp20	ENSMUST00000220188	ENSMUSP00000151748	TRANSLATION	protein_coding	stop	-	3	201	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004356	Utp20	ENSMUST00000219662	ENSMUSP00000152020	TRANSLATION	nonsense_mediated_decay	start	-	3	141	0	0	0	93.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004356	Utp20	ENSMUST00000220275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004356	Utp20	ENSMUST00000004470	ENSMUSP00000004470	TRANSLATION	protein_coding	-	CCDS48667.1	5	2789	0	0	1.5	585.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000004356	Utp20	ENSMUST00000218990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004356	Utp20	ENSMUST00000220439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004356	Utp20	ENSMUST00000218967	ENSMUSP00000151292	TRANSLATION	protein_coding	stop	-	3	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094673	Olfr1354	ENSMUST00000204587	ENSMUSP00000144801	TRANSLATION	protein_coding	-	CCDS56733.1	2	310	0	0.48	1.5	164.7	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094673	Olfr1354	ENSMUST00000075859	ENSMUSP00000093126	TRANSLATION	protein_coding	-	CCDS56733.1	-	310	0	0.48	1.5	164.7	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094673	Olfr1354	ENSMUST00000217073	ENSMUSP00000150374	TRANSLATION	protein_coding	-	CCDS56733.1	2	310	0	0.48	1.5	164.7	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091455	Otogl	ENSMUST00000165341	ENSMUSP00000129467	TRANSLATION	protein_coding	-	CCDS56747.1	5	2325	0	1.68	0.5	593.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000004359	Spic	ENSMUST00000133724	ENSMUSP00000114328	TRANSLATION	nonsense_mediated_decay	-	-	1	113	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004359	Spic	ENSMUST00000138734	ENSMUSP00000118799	TRANSLATION	protein_coding	stop	-	5	167	0	1.48	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004359	Spic	ENSMUST00000004473	ENSMUSP00000004473	TRANSLATION	protein_coding	-	CCDS36023.1	1	242	0	2.08	0.5	77.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004359	Spic	ENSMUST00000144338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047492	Inhbe	ENSMUST00000059718	ENSMUSP00000053977	TRANSLATION	protein_coding	-	CCDS24239.1	1	350	0	0.9	3.9	100.1	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000075706	Gpx4	ENSMUST00000097227	ENSMUSP00000094863	TRANSLATION	protein_coding	-	CCDS24007.1	1	253	7	4.66	1.5	155	0	-4,-6	-	-	18.186	MINOR
ENSMUSG00000075706	Gpx4	ENSMUST00000144698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075706	Gpx4	ENSMUST00000136081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075706	Gpx4	ENSMUST00000154095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075706	Gpx4	ENSMUST00000145703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075706	Gpx4	ENSMUST00000183037	ENSMUSP00000138186	TRANSLATION	protein_coding	-	-	2	157	7	4.16	0	155	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000075706	Gpx4	ENSMUST00000105372	ENSMUSP00000101011	TRANSLATION	protein_coding	-	CCDS35973.1	1	197	7	4.66	6.4	155	0	2,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000019842	Traf3ip2	ENSMUST00000019987	ENSMUSP00000019987	TRANSLATION	protein_coding	-	CCDS23789.1	1	555	0	0	0.5	123.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019842	Traf3ip2	ENSMUST00000156016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019842	Traf3ip2	ENSMUST00000155945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019842	Traf3ip2	ENSMUST00000131629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019842	Traf3ip2	ENSMUST00000129693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019795	Pcmt1	ENSMUST00000162606	ENSMUSP00000123866	TRANSLATION	protein_coding	-	CCDS83677.1	1	286	24	5.93	4.1	288.6	1	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000019795	Pcmt1	ENSMUST00000159977	ENSMUSP00000124135	TRANSLATION	protein_coding	stop	-	5	23	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019795	Pcmt1	ENSMUST00000159917	ENSMUSP00000124932	TRANSLATION	protein_coding	-	CCDS23687.2	1	285	24	5.93	4.1	288.6	1	-4,-7	-	-	19	PRINCIPAL:3
ENSMUSG00000019795	Pcmt1	ENSMUST00000160250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019795	Pcmt1	ENSMUST00000161428	ENSMUSP00000123758	TRANSLATION	protein_coding	start	-	1	177	21	4.33	0	199.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019795	Pcmt1	ENSMUST00000160517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019795	Pcmt1	ENSMUST00000159835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019795	Pcmt1	ENSMUST00000162682	ENSMUSP00000124246	TRANSLATION	protein_coding	stop	-	3	65	10	2.08	0	81.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019795	Pcmt1	ENSMUST00000163085	ENSMUSP00000125144	TRANSLATION	protein_coding	start	-	1	271	24	5.93	0	288.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000019795	Pcmt1	ENSMUST00000161123	ENSMUSP00000124100	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	2.05	0	44.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000094144	Gm21312	ENSMUST00000179258	ENSMUSP00000136519	TRANSLATION	protein_coding	-	CCDS78892.1	-	264	0	0.8	0.5	94.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000094144	Gm21312	ENSMUST00000181239	ENSMUSP00000137776	TRANSLATION	protein_coding	-	-	3	261	0	0.8	0.5	93.9	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000094144	Gm21312	ENSMUST00000180889	ENSMUSP00000137961	TRANSLATION	protein_coding	-	-	2	261	0	0.8	0.5	93.9	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000096486	Gm5426	ENSMUST00000074615	ENSMUSP00000136869	TRANSLATION	protein_coding	-	-	-	103	0	0	6.3	87.5	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000003072	Atp5d	ENSMUST00000003156	ENSMUSP00000003156	TRANSLATION	protein_coding	-	CCDS24010.1	1	168	0	4	7.5	0	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000003072	Atp5d	ENSMUST00000105366	ENSMUSP00000101005	TRANSLATION	protein_coding	-	CCDS83726.1	2	121	0	2.3	0.5	0	0	-4,0	-	-	2.598	MINOR
ENSMUSG00000003072	Atp5d	ENSMUST00000150347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003072	Atp5d	ENSMUST00000105367	ENSMUSP00000101006	TRANSLATION	protein_coding	-	CCDS24010.1	5	168	0	4	7.5	0	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000040043	Rbms2	ENSMUST00000218884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040043	Rbms2	ENSMUST00000238843	ENSMUSP00000159167	TRANSLATION	protein_coding	-	-	-	381	0	4.9	1	106.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040043	Rbms2	ENSMUST00000099139	ENSMUSP00000096742	TRANSLATION	protein_coding	-	CCDS24262.1	1	355	0	4.9	0.5	106.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040043	Rbms2	ENSMUST00000217722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040043	Rbms2	ENSMUST00000217750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040043	Rbms2	ENSMUST00000092033	ENSMUSP00000089664	TRANSLATION	protein_coding	-	CCDS24261.1	1	383	0	4.9	1.5	106.4	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000020015	Cdk17	ENSMUST00000213378	ENSMUSP00000149297	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020015	Cdk17	ENSMUST00000215286	ENSMUSP00000150873	TRANSLATION	nonsense_mediated_decay	start	-	2	481	19	9.25	0	241.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020015	Cdk17	ENSMUST00000216729	ENSMUSP00000149967	TRANSLATION	nonsense_mediated_decay	start	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020015	Cdk17	ENSMUST00000214445	ENSMUSP00000150690	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020015	Cdk17	ENSMUST00000215495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020015	Cdk17	ENSMUST00000069965	ENSMUSP00000070355	TRANSLATION	protein_coding	-	CCDS48670.1	1	523	19	9.25	21.5	241.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000035640	Cbarp	ENSMUST00000138776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035640	Cbarp	ENSMUST00000123967	ENSMUSP00000125962	TRANSLATION	nonsense_mediated_decay	-	-	3	107	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000035640	Cbarp	ENSMUST00000127515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035640	Cbarp	ENSMUST00000169546	ENSMUSP00000132978	TRANSLATION	protein_coding	-	-	5	705	0	0	0	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000035640	Cbarp	ENSMUST00000146180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035640	Cbarp	ENSMUST00000147778	ENSMUSP00000130389	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000035640	Cbarp	ENSMUST00000128488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035640	Cbarp	ENSMUST00000170219	ENSMUSP00000131487	TRANSLATION	protein_coding	-	CCDS56734.1	5	698	0	0	0.5	0	1	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000035640	Cbarp	ENSMUST00000128465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035640	Cbarp	ENSMUST00000142853	ENSMUSP00000115009	TRANSLATION	protein_coding	stop	-	2	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035640	Cbarp	ENSMUST00000132317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035640	Cbarp	ENSMUST00000132523	ENSMUSP00000128980	TRANSLATION	nonsense_mediated_decay	-	-	5	112	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000035640	Cbarp	ENSMUST00000149242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035640	Cbarp	ENSMUST00000136260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035640	Cbarp	ENSMUST00000105369	ENSMUSP00000101008	TRANSLATION	protein_coding	-	CCDS56734.1	5	698	0	0	0.5	0	1	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000035486	Plk5	ENSMUST00000105351	ENSMUSP00000100988	TRANSLATION	protein_coding	-	CCDS83729.1	1	595	20	6.95	1.5	279.7	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000035486	Plk5	ENSMUST00000152544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035486	Plk5	ENSMUST00000146826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035486	Plk5	ENSMUST00000039836	ENSMUSP00000044400	TRANSLATION	protein_coding	-	CCDS35980.1	2	599	20	6.95	1.5	272.4	0	-4,-1	-	-	17.562	PRINCIPAL:3
ENSMUSG00000035773	Kiss1r	ENSMUST00000219745	ENSMUSP00000151936	TRANSLATION	protein_coding	-	-	1	312	0	2.4	0.5	88.7	6	-4,-7	-	-	5.394	MINOR
ENSMUSG00000035773	Kiss1r	ENSMUST00000219883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035773	Kiss1r	ENSMUST00000045529	ENSMUSP00000040516	TRANSLATION	protein_coding	-	CCDS23998.1	1	396	0	3.48	1.5	162.8	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051067	Lingo3	ENSMUST00000219924	ENSMUSP00000151329	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000051067	Lingo3	ENSMUST00000053986	ENSMUSP00000054960	TRANSLATION	protein_coding	-	CCDS24035.1	1	589	0	1.6	6.3	198.1	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000056888	Glipr1	ENSMUST00000074805	ENSMUSP00000074359	TRANSLATION	protein_coding	-	CCDS24169.1	1	255	2	4.43	1.5	89.1	1	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000056888	Glipr1	ENSMUST00000162508	ENSMUSP00000123990	TRANSLATION	protein_coding	-	CCDS24169.1	5	255	2	4.43	1.5	89.1	1	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000056888	Glipr1	ENSMUST00000161870	ENSMUSP00000134094	TRANSLATION	protein_coding	start	-	3	98	1	2.43	0	33.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056888	Glipr1	ENSMUST00000174201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056888	Glipr1	ENSMUST00000159550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096858	Olfr805	ENSMUST00000217219	ENSMUSP00000149493	TRANSLATION	protein_coding	-	CCDS24332.1	5	319	0	0.74	2.7	175.8	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096858	Olfr805	ENSMUST00000204717	ENSMUSP00000145414	TRANSLATION	protein_coding	stop	-	5	47	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000096858	Olfr805	ENSMUST00000216794	ENSMUSP00000149243	TRANSLATION	protein_coding	-	CCDS24332.1	5	319	0	0.74	2.7	175.8	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096858	Olfr805	ENSMUST00000078876	ENSMUSP00000092874	TRANSLATION	protein_coding	-	CCDS24332.1	-	319	0	0.74	2.7	175.8	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109864	Eid3	ENSMUST00000211623	ENSMUSP00000147261	TRANSLATION	protein_coding	-	CCDS83739.1	-	375	0	0	0.5	150.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096000	Olfr773	ENSMUST00000072976	ENSMUSP00000072743	TRANSLATION	protein_coding	-	CCDS24310.1	-	311	0	0.24	6.3	162.1	0	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020078	Vps26a	ENSMUST00000217868	ENSMUSP00000151888	TRANSLATION	protein_coding	stop	-	2	123	0	3.25	0	177.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020078	Vps26a	ENSMUST00000219574	ENSMUSP00000151774	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	1	0	38.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020078	Vps26a	ENSMUST00000105447	ENSMUSP00000101087	TRANSLATION	protein_coding	-	CCDS35921.1	1	327	0	8.33	11.8	446.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020078	Vps26a	ENSMUST00000092473	ENSMUSP00000090130	TRANSLATION	protein_coding	-	CCDS48579.1	1	359	0	8.33	3.9	446.8	0	-4,-2	-	-	12.807	MINOR
ENSMUSG00000112931	Gm4303	ENSMUST00000218922	ENSMUSP00000151319	TRANSLATION	protein_coding	-	CCDS48681.1	-	289	0	1	0.5	70.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038602	Slc35f1	ENSMUST00000105473	ENSMUSP00000101113	TRANSLATION	protein_coding	-	CCDS23843.1	1	408	0	0	1.5	494.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000001151	Pcnt	ENSMUST00000220395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001151	Pcnt	ENSMUST00000218747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001151	Pcnt	ENSMUST00000219701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001151	Pcnt	ENSMUST00000001179	ENSMUSP00000001179	TRANSLATION	protein_coding	-	CCDS23944.1	2	2916	0	0	0.5	85.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000001151	Pcnt	ENSMUST00000219243	ENSMUSP00000151981	TRANSLATION	nonsense_mediated_decay	start	-	5	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001151	Pcnt	ENSMUST00000217838	ENSMUSP00000151534	TRANSLATION	protein_coding	-	-	1	2898	0	0	0.5	85.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000001151	Pcnt	ENSMUST00000219011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001151	Pcnt	ENSMUST00000219403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075232	Amd1	ENSMUST00000099945	ENSMUSP00000097528	TRANSLATION	protein_coding	-	CCDS48544.1	1	334	5	7.75	8.8	416.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000075232	Amd1	ENSMUST00000213620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075232	Amd1	ENSMUST00000214698	ENSMUSP00000151015	TRANSLATION	protein_coding	stop	-	3	185	4	4	0	248.9	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000075232	Amd1	ENSMUST00000238953	ENSMUSP00000158947	TRANSLATION	protein_coding	-	-	-	463	5	7.75	0	416.4	0	-4,-5	-	-	17	MINOR
ENSMUSG00000075232	Amd1	ENSMUST00000238969	ENSMUSP00000159133	TRANSLATION	protein_coding	-	CCDS48544.1	-	334	5	7.75	8.8	416.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000075232	Amd1	ENSMUST00000216993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112864	Gm18596	ENSMUST00000218133	ENSMUSP00000151937	TRANSLATION	protein_coding	-	-	-	280	0	0	0	97.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020114	Cand1	ENSMUST00000148802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020114	Cand1	ENSMUST00000149155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020114	Cand1	ENSMUST00000126373	ENSMUSP00000115234	TRANSLATION	protein_coding	stop	-	3	247	0	4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020114	Cand1	ENSMUST00000020315	ENSMUSP00000020315	TRANSLATION	protein_coding	-	CCDS48701.1	1	1230	0	15.08	18.3	218.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019883	Echdc1	ENSMUST00000020034	ENSMUSP00000020034	TRANSLATION	protein_coding	-	CCDS23760.1	1	322	21	2.69	0.5	128.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000019883	Echdc1	ENSMUST00000161426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019883	Echdc1	ENSMUST00000161605	ENSMUSP00000125048	TRANSLATION	protein_coding	stop	-	5	165	16	2.09	0	69.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019883	Echdc1	ENSMUST00000160399	ENSMUSP00000125553	TRANSLATION	protein_coding	-	CCDS48528.1	1	299	21	2.69	5.1	128.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000003346	Abhd17a	ENSMUST00000187646	ENSMUSP00000140424	TRANSLATION	protein_coding	stop	-	5	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003346	Abhd17a	ENSMUST00000189605	ENSMUSP00000141177	TRANSLATION	protein_coding	start	-	3	176	2	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003346	Abhd17a	ENSMUST00000191440	ENSMUSP00000139766	TRANSLATION	protein_coding	-	-	1	236	1	0	0	33.1	0	-4,-7	-	-	6.999	MINOR
ENSMUSG00000003346	Abhd17a	ENSMUST00000003436	ENSMUSP00000003436	TRANSLATION	protein_coding	-	CCDS24027.1	1	310	3	0.8	8.8	33.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000019998	Stx7	ENSMUST00000020174	ENSMUSP00000020174	TRANSLATION	protein_coding	-	CCDS23749.1	1	261	0	6.29	8.5	162	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019998	Stx7	ENSMUST00000218050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019998	Stx7	ENSMUST00000220041	ENSMUSP00000151638	TRANSLATION	protein_coding	-	CCDS23749.1	1	261	0	6.29	8.5	162	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019998	Stx7	ENSMUST00000219553	ENSMUSP00000151686	TRANSLATION	protein_coding	stop	-	1	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019998	Stx7	ENSMUST00000218643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040287	Stac3	ENSMUST00000160610	ENSMUSP00000124638	TRANSLATION	protein_coding	stop	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040287	Stac3	ENSMUST00000162302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040287	Stac3	ENSMUST00000160019	ENSMUSP00000125124	TRANSLATION	protein_coding	-	CCDS24242.1	1	360	8	4.45	1.5	118.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040287	Stac3	ENSMUST00000160760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040287	Stac3	ENSMUST00000035839	ENSMUSP00000048148	TRANSLATION	protein_coding	-	CCDS24242.1	1	360	8	4.45	1.5	118.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050473	Slc35d3	ENSMUST00000059805	ENSMUSP00000060589	TRANSLATION	protein_coding	-	CCDS23719.1	1	422	0	0	1.5	0	0	-2,0	-	-	0	PRINCIPAL:1
ENSMUSG00000019960	Dusp6	ENSMUST00000020118	ENSMUSP00000020118	TRANSLATION	protein_coding	-	CCDS24147.1	1	381	9	3	12.8	198	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019960	Dusp6	ENSMUST00000220291	ENSMUSP00000151438	TRANSLATION	protein_coding	-	-	5	235	8	2	4.5	131	0	-4,-5	-	-	12.504	MINOR
ENSMUSG00000019960	Dusp6	ENSMUST00000219988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019960	Dusp6	ENSMUST00000220218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036019	Tmtc2	ENSMUST00000133441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036019	Tmtc2	ENSMUST00000130665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036019	Tmtc2	ENSMUST00000143691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036019	Tmtc2	ENSMUST00000147997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036019	Tmtc2	ENSMUST00000061506	ENSMUSP00000061919	TRANSLATION	protein_coding	-	CCDS24157.1	1	836	0	5.21	7.6	212.3	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000036019	Tmtc2	ENSMUST00000139741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035351	Nup37	ENSMUST00000218935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035351	Nup37	ENSMUST00000052355	ENSMUSP00000059880	TRANSLATION	protein_coding	-	CCDS24107.1	1	326	0	9.08	13.8	25.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035351	Nup37	ENSMUST00000169309	ENSMUSP00000129728	TRANSLATION	protein_coding	-	CCDS24107.1	1	326	0	9.08	13.8	25.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035351	Nup37	ENSMUST00000219121	ENSMUSP00000151416	TRANSLATION	protein_coding	start	-	3	67	0	1.632	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035351	Nup37	ENSMUST00000219059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035351	Nup37	ENSMUST00000219859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035873	Pawr	ENSMUST00000095313	ENSMUSP00000092951	TRANSLATION	protein_coding	-	CCDS36053.1	1	333	0	2.75	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000035873	Pawr	ENSMUST00000218332	ENSMUSP00000151457	TRANSLATION	protein_coding	-	-	1	289	0	2.75	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019877	Serinc1	ENSMUST00000169122	ENSMUSP00000126561	TRANSLATION	protein_coding	stop	-	3	220	0	0	0	242.9	10	-2,-5	-	-	-1	MINOR
ENSMUSG00000019877	Serinc1	ENSMUST00000020027	ENSMUSP00000020027	TRANSLATION	protein_coding	-	CCDS23853.1	1	453	0	0	8.8	580.7	14	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000019877	Serinc1	ENSMUST00000170062	ENSMUSP00000127041	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	98.1	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000019877	Serinc1	ENSMUST00000166997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019877	Serinc1	ENSMUST00000164400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078451	Ppil6	ENSMUST00000214145	ENSMUSP00000149689	TRANSLATION	protein_coding	start	-	3	144	8	3.5	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078451	Ppil6	ENSMUST00000105507	ENSMUSP00000101146	TRANSLATION	protein_coding	-	CCDS48548.1	1	313	8	4.33	1.5	133.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000078451	Ppil6	ENSMUST00000215608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039910	Cited2	ENSMUST00000218370	ENSMUSP00000151600	TRANSLATION	protein_coding	stop	-	1	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039910	Cited2	ENSMUST00000038107	ENSMUSP00000038405	TRANSLATION	protein_coding	-	CCDS23708.1	1	269	0	0.4	2.7	343.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039910	Cited2	ENSMUST00000219558	ENSMUSP00000151452	TRANSLATION	protein_coding	-	CCDS23708.1	-	269	0	0.4	2.7	343.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091511	Vmn2r87	ENSMUST00000164227	ENSMUSP00000129215	TRANSLATION	protein_coding	-	CCDS48738.1	5	848	3	2.8	0.5	382.9	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020181	Nav3	ENSMUST00000238286	ENSMUSP00000158790	TRANSLATION	protein_coding	-	-	-	1844	9	0	1.2	23.1	0	-4,-7	-	-	7.734	MINOR
ENSMUSG00000020181	Nav3	ENSMUST00000032719	ENSMUSP00000032719	TRANSLATION	protein_coding	-	CCDS36054.1	5	2366	9	3.05	2.9	77	0	-4,-2	-	-	16.59	MINOR
ENSMUSG00000020181	Nav3	ENSMUST00000161223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020181	Nav3	ENSMUST00000160159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020181	Nav3	ENSMUST00000163071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020181	Nav3	ENSMUST00000239301	ENSMUSP00000159239	TRANSLATION	protein_coding	-	-	-	2309	9	3.65	1.7	79.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020181	Nav3	ENSMUST00000161582	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020181	Nav3	ENSMUST00000161798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000182367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000182762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000092431	ENSMUSP00000090087	TRANSLATION	protein_coding	-	CCDS23910.1	5	1940	0	34.08	0.5	704.9	0	-4,-5	-	-	9.558	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000183240	ENSMUSP00000138474	TRANSLATION	protein_coding	stop	-	3	250	0	6.698	0	140	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000181974	ENSMUSP00000138285	TRANSLATION	protein_coding	-	CCDS59546.1	1	898	0	13.25	0.5	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000183023	ENSMUSP00000138450	TRANSLATION	protein_coding	start	-	1	556	0	3.25	0	77.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182795	ENSMUSP00000138413	TRANSLATION	protein_coding	-	-	5	881	0	13.25	0	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000183001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000182474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000092434	ENSMUSP00000090090	TRANSLATION	protein_coding	-	CCDS23909.1	5	1961	0	33.705	0.5	704.9	0	-4,-5	-	-	8.808	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000218680	ENSMUSP00000151906	TRANSLATION	protein_coding	-	-	5	1758	0	34.355	0	736.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000069601	Ank3	ENSMUST00000182665	ENSMUSP00000140773	TRANSLATION	nonsense_mediated_decay	start	-	1	851	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000183074	ENSMUSP00000138671	TRANSLATION	protein_coding	-	-	5	1157	0	13.25	0	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000092432	ENSMUSP00000090088	TRANSLATION	protein_coding	-	CCDS48590.1	5	1943	0	33.705	0.5	704.9	0	-4,-5	-	-	8.808	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000183261	ENSMUSP00000138095	TRANSLATION	protein_coding	-	-	5	1174	0	13.25	0	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182692	ENSMUSP00000138623	TRANSLATION	protein_coding	-	-	5	1001	0	13.25	1.2	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000054167	ENSMUSP00000061698	TRANSLATION	protein_coding	-	CCDS35931.1	5	1922	0	34.08	0.5	704.9	0	-4,-5	-	-	9.558	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000183082	ENSMUSP00000138092	TRANSLATION	protein_coding	start/stop	-	2	114	0	2.233	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000183169	ENSMUSP00000138348	TRANSLATION	protein_coding	-	-	5	1807	0	34.08	0	736.4	0	-4,-5	-	-	11.448	ALTERNATIVE:2
ENSMUSG00000069601	Ank3	ENSMUST00000047061	ENSMUSP00000045834	TRANSLATION	protein_coding	-	CCDS23911.1	5	838	0	12.45	0.5	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000217780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000182683	ENSMUSP00000138375	TRANSLATION	protein_coding	start/stop	-	5	335	0	4.88	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069601	Ank3	ENSMUST00000182492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000218194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069601	Ank3	ENSMUST00000182207	ENSMUSP00000138531	TRANSLATION	protein_coding	start	-	5	459	0	4.233	0	77.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182993	ENSMUSP00000138601	TRANSLATION	protein_coding	-	-	1	291	0	7.3	0	162.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182437	ENSMUSP00000138586	TRANSLATION	protein_coding	-	-	5	961	0	13.25	0	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000182029	ENSMUSP00000138337	TRANSLATION	protein_coding	-	-	1	1093	0	13.25	0.5	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182972	ENSMUSP00000138481	TRANSLATION	protein_coding	start	-	1	1181	0	16.08	0	229.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182155	ENSMUSP00000138347	TRANSLATION	protein_coding	-	CCDS59545.1	1	1726	0	34.08	0.5	736.4	0	-4,-5	-	-	11.448	PRINCIPAL:2
ENSMUSG00000069601	Ank3	ENSMUST00000182557	ENSMUSP00000138603	TRANSLATION	protein_coding	-	-	1	297	0	6	0	139.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000183148	ENSMUSP00000138770	TRANSLATION	protein_coding	-	-	5	1985	0	34.08	1	704.9	0	-4,-5	-	-	9.558	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182439	ENSMUSP00000138356	TRANSLATION	protein_coding	-	CCDS23911.1	1	838	0	12.45	0.5	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069601	Ank3	ENSMUST00000186247	ENSMUSP00000139496	TRANSLATION	protein_coding	start/stop	-	5	2871	0	6.983	0	77.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000185582	ENSMUSP00000140724	TRANSLATION	protein_coding	start/stop	-	5	178	0	1.5	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000092433	ENSMUSP00000090089	TRANSLATION	protein_coding	-	CCDS23912.1	1	1094	0	13.25	0.5	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182992	ENSMUSP00000138686	TRANSLATION	protein_coding	stop	-	5	2622	0	34.035	1.5	707.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182884	ENSMUSP00000138326	TRANSLATION	protein_coding	-	CCDS23909.1	1	1961	0	33.705	0.5	704.9	0	-4,-5	-	-	8.808	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182269	ENSMUSP00000138123	TRANSLATION	protein_coding	-	-	5	978	0	13.25	0	176.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069601	Ank3	ENSMUST00000182162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044624	Gm4922	ENSMUST00000055107	ENSMUSP00000055273	TRANSLATION	protein_coding	-	CCDS48509.1	3	497	3	0.6	0.5	210	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044624	Gm4922	ENSMUST00000216654	ENSMUSP00000149756	TRANSLATION	protein_coding	-	CCDS48509.1	1	497	3	0.6	0.5	210	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095647	Taar7a	ENSMUST00000078532	ENSMUSP00000077616	TRANSLATION	protein_coding	-	CCDS23740.1	-	358	0	0.6	1.5	190.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095593	Gm7138	ENSMUST00000167669	ENSMUSP00000130212	TRANSLATION	protein_coding	-	-	-	230	0	0	0.5	51	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033208	S100b	ENSMUST00000036387	ENSMUSP00000047968	TRANSLATION	protein_coding	-	CCDS35943.1	1	92	15	2	17	102.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000095817	Gm3238	ENSMUST00000168298	ENSMUSP00000130008	TRANSLATION	protein_coding	-	CCDS56727.1	-	230	0	0	0.5	70	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019808	Adat2	ENSMUST00000019944	ENSMUSP00000019944	TRANSLATION	protein_coding	-	CCDS35847.1	1	191	5	5.05	5.1	73.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000069582	Krtap10-4	ENSMUST00000092369	ENSMUSP00000139550	TRANSLATION	protein_coding	-	CCDS78848.1	-	221	0	0	0.5	62.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000107662	Olfr772	ENSMUST00000214672	ENSMUSP00000148854	TRANSLATION	protein_coding	-	CCDS24309.1	5	311	0	0.28	7.6	160.7	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000107662	Olfr772	ENSMUST00000169800	ENSMUSP00000132389	TRANSLATION	protein_coding	-	CCDS24309.1	-	311	0	0.28	7.6	160.7	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057134	Ado	ENSMUST00000075686	ENSMUSP00000075107	TRANSLATION	protein_coding	-	CCDS48588.1	-	256	3	0	1.5	221	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000020137	Thap2	ENSMUST00000218989	ENSMUSP00000151925	TRANSLATION	protein_coding	-	-	-	37	0	0	0	0	0	-3,0	-	-	0	MINOR
ENSMUSG00000020137	Thap2	ENSMUST00000218842	ENSMUSP00000151353	TRANSLATION	protein_coding	-	CCDS24179.1	1	217	5	1.75	3.9	64.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020137	Thap2	ENSMUST00000020346	ENSMUSP00000020346	TRANSLATION	protein_coding	-	-	1	49	0	0	0	0	0	-3,-1	-	-	0	MINOR
ENSMUSG00000034024	Cct2	ENSMUST00000218719	ENSMUSP00000151890	TRANSLATION	protein_coding	stop	-	3	85	7	2.5	0	104.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034024	Cct2	ENSMUST00000219573	ENSMUSP00000151306	TRANSLATION	protein_coding	-	-	3	181	11	3.25	0	97.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034024	Cct2	ENSMUST00000047672	ENSMUSP00000036288	TRANSLATION	protein_coding	-	CCDS36067.1	1	535	24	13.91	13	494.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034024	Cct2	ENSMUST00000218502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034024	Cct2	ENSMUST00000219036	ENSMUSP00000151587	TRANSLATION	protein_coding	stop	-	2	217	14	5.5	0	186.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034024	Cct2	ENSMUST00000219690	ENSMUSP00000152005	TRANSLATION	protein_coding	start	-	5	115	7	2.396	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034024	Cct2	ENSMUST00000218059	ENSMUSP00000151958	TRANSLATION	protein_coding	stop	-	3	64	7	1.75	0	75.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019986	Ahi1	ENSMUST00000214893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019986	Ahi1	ENSMUST00000163505	ENSMUSP00000127043	TRANSLATION	protein_coding	-	CCDS48512.1	1	142	0	1	1.5	61.8	0	-4,-5	-	-	3.504	MINOR
ENSMUSG00000019986	Ahi1	ENSMUST00000215543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019986	Ahi1	ENSMUST00000213104	ENSMUSP00000149010	TRANSLATION	nonsense_mediated_decay	-	-	2	1005	0	5.76	0	103.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019986	Ahi1	ENSMUST00000213852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019986	Ahi1	ENSMUST00000105525	ENSMUSP00000101164	TRANSLATION	protein_coding	-	CCDS35860.1	1	1047	0	5.76	1.5	103.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019986	Ahi1	ENSMUST00000214745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037855	Zfp365	ENSMUST00000127869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037855	Zfp365	ENSMUST00000138543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037855	Zfp365	ENSMUST00000064656	ENSMUSP00000067197	TRANSLATION	protein_coding	-	CCDS23903.1	1	408	4	0	1.5	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000037855	Zfp365	ENSMUST00000132870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032714	Syde1	ENSMUST00000040580	ENSMUSP00000043085	TRANSLATION	protein_coding	-	CCDS48613.1	1	737	0	2.84	1.5	147.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040009	Gnaz	ENSMUST00000159991	ENSMUSP00000124639	TRANSLATION	protein_coding	-	CCDS23922.1	1	355	24	2	21.5	395.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000040009	Gnaz	ENSMUST00000037813	ENSMUSP00000036087	TRANSLATION	protein_coding	-	CCDS23922.1	1	355	24	2	21.5	395.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000040009	Gnaz	ENSMUST00000160421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019810	Fuca2	ENSMUST00000150048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019810	Fuca2	ENSMUST00000120549	ENSMUSP00000114021	TRANSLATION	protein_coding	stop	-	3	95	0	1.8	0	127	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019810	Fuca2	ENSMUST00000166466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019810	Fuca2	ENSMUST00000121465	ENSMUSP00000113499	TRANSLATION	protein_coding	-	CCDS23701.1	1	461	0	4.96	0.5	508.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019810	Fuca2	ENSMUST00000060212	ENSMUSP00000055519	TRANSLATION	protein_coding	-	CCDS23701.1	1	461	0	4.96	0.5	508.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019810	Fuca2	ENSMUST00000130865	ENSMUSP00000116143	TRANSLATION	protein_coding	stop	-	5	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050663	Trhde	ENSMUST00000061632	ENSMUSP00000057449	TRANSLATION	protein_coding	-	CCDS24175.1	1	1025	14	14.39	1.7	534.2	1	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000050663	Trhde	ENSMUST00000239411	ENSMUSP00000159381	TRANSLATION	protein_coding	-	-	-	1066	14	14.39	2.2	534.2	1	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000050663	Trhde	ENSMUST00000152702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050663	Trhde	ENSMUST00000152282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000711	Rab5b	ENSMUST00000000727	ENSMUSP00000000727	TRANSLATION	protein_coding	-	CCDS24287.1	1	215	21	4.8	15	206.4	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000000711	Rab5b	ENSMUST00000220593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005355	Casp14	ENSMUST00000219237	ENSMUSP00000151657	TRANSLATION	protein_coding	-	CCDS23969.1	5	257	4	3.56	0.5	129.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000005355	Casp14	ENSMUST00000005488	ENSMUSP00000005488	TRANSLATION	protein_coding	-	CCDS23969.1	1	257	4	3.56	0.5	129.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038280	Ostm1	ENSMUST00000040718	ENSMUSP00000035516	TRANSLATION	protein_coding	-	CCDS23814.1	1	338	0	0	1.5	279.7	3	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000038280	Ostm1	ENSMUST00000147899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038280	Ostm1	ENSMUST00000105497	ENSMUSP00000101136	TRANSLATION	protein_coding	-	-	2	181	0	0	0	191.3	3	-4,-7	-	-	0.696	MINOR
ENSMUSG00000038280	Ostm1	ENSMUST00000154048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038280	Ostm1	ENSMUST00000144806	ENSMUSP00000116534	TRANSLATION	protein_coding	stop	-	5	168	0	0	0	194.5	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000020102	Slc16a7	ENSMUST00000211781	ENSMUSP00000147968	TRANSLATION	protein_coding	-	CCDS24218.1	1	484	0	0	0.5	122.5	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020102	Slc16a7	ENSMUST00000210069	ENSMUSP00000147861	TRANSLATION	protein_coding	stop	-	2	55	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000020102	Slc16a7	ENSMUST00000063318	ENSMUSP00000065433	TRANSLATION	protein_coding	-	CCDS24218.1	1	484	0	0	0.5	122.5	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020102	Slc16a7	ENSMUST00000210780	ENSMUSP00000147560	TRANSLATION	protein_coding	-	CCDS24218.1	5	484	0	0	0.5	122.5	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020102	Slc16a7	ENSMUST00000209246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020102	Slc16a7	ENSMUST00000105257	ENSMUSP00000100892	TRANSLATION	protein_coding	-	CCDS24218.1	1	484	0	0	0.5	122.5	13	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091888	Vmn2r80	ENSMUST00000165834	ENSMUSP00000132299	TRANSLATION	protein_coding	-	CCDS48616.1	5	863	0	3.34	0.5	370.3	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000061983	Rps12	ENSMUST00000220070	ENSMUSP00000151271	TRANSLATION	protein_coding	-	CCDS23733.1	1	132	0	4	19.5	103.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061983	Rps12	ENSMUST00000218142	ENSMUSP00000151838	TRANSLATION	nonsense_mediated_decay	start	-	2	48	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061983	Rps12	ENSMUST00000220171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061983	Rps12	ENSMUST00000219783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061983	Rps12	ENSMUST00000073926	ENSMUSP00000073581	TRANSLATION	protein_coding	-	-	5	137	0	4	0	95	0	-4,-5	-	-	11.478	MINOR
ENSMUSG00000061983	Rps12	ENSMUST00000217883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061983	Rps12	ENSMUST00000218221	ENSMUSP00000151586	TRANSLATION	protein_coding	-	-	5	148	0	4	0	103.7	0	-4,-7	-	-	12	MINOR
ENSMUSG00000061983	Rps12	ENSMUST00000218107	ENSMUSP00000151305	TRANSLATION	protein_coding	-	CCDS23733.1	1	132	0	4	19.5	103.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061983	Rps12	ENSMUST00000218185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006736	Tspan31	ENSMUST00000218603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006736	Tspan31	ENSMUST00000217875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006736	Tspan31	ENSMUST00000060991	ENSMUSP00000057751	TRANSLATION	protein_coding	-	CCDS24227.1	1	210	0	0	6.3	63.4	0	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000006736	Tspan31	ENSMUST00000220344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006736	Tspan31	ENSMUST00000218488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018166	Erbb3	ENSMUST00000082059	ENSMUSP00000080716	TRANSLATION	protein_coding	-	CCDS24283.1	1	1339	2	22.6	5.1	736	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000118528	AC166256.1	ENSMUST00000238910	ENSMUSP00000159048	TRANSLATION	protein_coding	-	-	-	42	0	0	0	0	0	-2,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000037710	Cisd1	ENSMUST00000045887	ENSMUSP00000043559	TRANSLATION	protein_coding	-	CCDS23917.1	1	108	11	1.75	11.6	78.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000003227	Edar	ENSMUST00000003312	ENSMUSP00000003312	TRANSLATION	protein_coding	-	CCDS23862.1	1	448	0	0	8.7	0	0	1,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000019802	Sec63	ENSMUST00000124613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019802	Sec63	ENSMUST00000144228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019802	Sec63	ENSMUST00000155410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019802	Sec63	ENSMUST00000105496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019802	Sec63	ENSMUST00000019937	ENSMUSP00000019937	TRANSLATION	protein_coding	-	CCDS23815.1	1	760	0	6.33	0.5	130.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034560	Washc4	ENSMUST00000218570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034560	Washc4	ENSMUST00000219582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034560	Washc4	ENSMUST00000038388	ENSMUSP00000039322	TRANSLATION	protein_coding	-	CCDS36015.1	5	1173	0	0	10.8	1622.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034560	Washc4	ENSMUST00000217842	ENSMUSP00000151417	TRANSLATION	nonsense_mediated_decay	-	-	1	187	0	0	0	211	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039891	Txlnb	ENSMUST00000037964	ENSMUSP00000044936	TRANSLATION	protein_coding	-	CCDS35851.1	1	685	0	0	0.5	393.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039891	Txlnb	ENSMUST00000175676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019852	Arfgef3	ENSMUST00000019999	ENSMUSP00000019999	TRANSLATION	protein_coding	-	-	1	1709	0	1.995	0	88.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019852	Arfgef3	ENSMUST00000215836	ENSMUSP00000149210	TRANSLATION	protein_coding	-	CCDS23712.1	1	2170	0	1.995	1.5	88.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000048661	Lemd3	ENSMUST00000119093	ENSMUSP00000112661	TRANSLATION	protein_coding	-	-	2	940	0	5.6	0	63.2	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048661	Lemd3	ENSMUST00000119944	ENSMUSP00000113103	TRANSLATION	protein_coding	-	CCDS48703.1	1	918	0	5.6	0.5	63.2	1	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000112919	Gm9049	ENSMUST00000178998	ENSMUSP00000151392	TRANSLATION	protein_coding	-	-	-	802	0	1	15	351.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038587	Akap12	ENSMUST00000239373	ENSMUSP00000159267	TRANSLATION	protein_coding	-	-	-	1604	0	0	0	141.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038587	Akap12	ENSMUST00000239220	ENSMUSP00000159223	TRANSLATION	protein_coding	stop	-	-	190	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000038587	Akap12	ENSMUST00000045730	ENSMUSP00000035829	TRANSLATION	protein_coding	-	CCDS56673.1	1	1684	0	0	0.5	141.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038587	Akap12	ENSMUST00000215696	ENSMUSP00000150261	TRANSLATION	protein_coding	-	-	1	1579	0	0	0	141.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038587	Akap12	ENSMUST00000216139	ENSMUSP00000159240	TRANSLATION	protein_coding	-	-	1	1604	0	0	0	141.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000046493	Olfr1352	ENSMUST00000058991	ENSMUSP00000054355	TRANSLATION	protein_coding	-	CCDS23973.1	2	309	0	1.36	6.3	175.6	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000046493	Olfr1352	ENSMUST00000203973	ENSMUSP00000144895	TRANSLATION	protein_coding	stop	-	2	122	0	0.6	0	88.4	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000004360	9330159F19Rik	ENSMUST00000213490	ENSMUSP00000149712	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	0	0	143.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004360	9330159F19Rik	ENSMUST00000213489	ENSMUSP00000151062	TRANSLATION	protein_coding	-	CCDS48527.1	1	648	0	0	0.5	143.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000004360	9330159F19Rik	ENSMUST00000092627	ENSMUSP00000090291	TRANSLATION	protein_coding	-	CCDS48527.1	1	648	0	0	0.5	143.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020189	Osbpl8	ENSMUST00000105275	ENSMUSP00000100911	TRANSLATION	protein_coding	-	CCDS36056.1	1	889	0	9.47	8.8	348.3	1	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000020189	Osbpl8	ENSMUST00000238838	ENSMUSP00000158904	TRANSLATION	protein_coding	stop	-	-	695	0	9.32	0	334	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020189	Osbpl8	ENSMUST00000217693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020189	Osbpl8	ENSMUST00000220139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020189	Osbpl8	ENSMUST00000095310	ENSMUSP00000092948	TRANSLATION	protein_coding	-	CCDS24166.1	1	847	0	9.47	8.8	348.3	1	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000032977	Fam207a	ENSMUST00000045454	ENSMUSP00000036382	TRANSLATION	protein_coding	-	CCDS23955.1	1	219	0	0	3.9	85.9	0	-4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000032977	Fam207a	ENSMUST00000217681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032977	Fam207a	ENSMUST00000218414	ENSMUSP00000151768	TRANSLATION	protein_coding	start	-	1	200	0	0	0	85.9	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000020010	Vnn3	ENSMUST00000020190	ENSMUSP00000020190	TRANSLATION	protein_coding	-	CCDS23734.1	1	500	3	6.8	1.5	60.3	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000019893	Ros1	ENSMUST00000020045	ENSMUSP00000020045	TRANSLATION	protein_coding	-	CCDS23838.1	1	2340	19	10.77	1.5	418.1	0	0,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000019893	Ros1	ENSMUST00000219692	ENSMUSP00000151932	TRANSLATION	nonsense_mediated_decay	-	-	5	544	0	2.64	0	73.9	0	0,-4	-	-	-1	MINOR
ENSMUSG00000019893	Ros1	ENSMUST00000218452	ENSMUSP00000151720	TRANSLATION	protein_coding	-	-	5	2319	19	10.77	1	418.1	0	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000019893	Ros1	ENSMUST00000219173	ENSMUSP00000151615	TRANSLATION	nonsense_mediated_decay	-	-	5	1855	0	4.02	0	99.8	0	0,-4	-	-	-1	MINOR
ENSMUSG00000019890	Nts	ENSMUST00000020040	ENSMUSP00000020040	TRANSLATION	protein_coding	-	CCDS24154.1	1	169	0	0	6.3	240.9	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000020064	Herc4	ENSMUST00000219789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020064	Herc4	ENSMUST00000220097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020064	Herc4	ENSMUST00000219002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020064	Herc4	ENSMUST00000219279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020064	Herc4	ENSMUST00000219577	ENSMUSP00000151886	TRANSLATION	protein_coding	-	-	1	1057	6	12.51	7.5	612.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020064	Herc4	ENSMUST00000218533	ENSMUSP00000151505	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	0.8	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020064	Herc4	ENSMUST00000219856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020064	Herc4	ENSMUST00000219177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020064	Herc4	ENSMUST00000020258	ENSMUSP00000020258	TRANSLATION	protein_coding	-	CCDS23897.1	1	1049	6	12.51	7.5	612.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000020064	Herc4	ENSMUST00000218073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020064	Herc4	ENSMUST00000219230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037490	Slc2a12	ENSMUST00000159174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037490	Slc2a12	ENSMUST00000042261	ENSMUSP00000043962	TRANSLATION	protein_coding	-	CCDS23729.1	1	622	0	0.6	2.7	342.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096054	Syne1	ENSMUST00000215887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096054	Syne1	ENSMUST00000041639	ENSMUSP00000039440	TRANSLATION	protein_coding	-	CCDS56680.1	1	1431	0	5.475	1.5	136.1	0	-4,-2	-	-	5.67	MINOR
ENSMUSG00000096054	Syne1	ENSMUST00000095899	ENSMUSP00000093587	TRANSLATION	protein_coding	-	CCDS56679.1	1	949	0	0	1.5	225.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000096054	Syne1	ENSMUST00000215467	ENSMUSP00000149637	TRANSLATION	protein_coding	stop	-	1	1288	0	0	0	24.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096054	Syne1	ENSMUST00000217592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096054	Syne1	ENSMUST00000217064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096054	Syne1	ENSMUST00000215295	ENSMUSP00000150262	TRANSLATION	protein_coding	-	-	5	8799	0	5.475	0	608.5	0	-4,-2	-	-	11.67	PRINCIPAL:1
ENSMUSG00000096054	Syne1	ENSMUST00000215021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096054	Syne1	ENSMUST00000214945	ENSMUSP00000149011	TRANSLATION	protein_coding	stop	-	1	615	0	5.64	0	149.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000050157	Gm867	ENSMUST00000219979	ENSMUSP00000151812	TRANSLATION	protein_coding	-	-	3	151	0	0	0.5	99.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050157	Gm867	ENSMUST00000059658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094622	Gm3055	ENSMUST00000219864	ENSMUSP00000151476	TRANSLATION	protein_coding	stop	-	3	186	11	2.4	0	135.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094622	Gm3055	ENSMUST00000218939	ENSMUSP00000151912	TRANSLATION	protein_coding	-	-	1	243	0	1	0.5	75.8	0	-4,-5	-	-	4.926	PRINCIPAL:1
ENSMUSG00000094622	Gm3055	ENSMUST00000105316	ENSMUSP00000100953	TRANSLATION	protein_coding	start	-	5	239	0	1	0	75.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039480	Nt5dc1	ENSMUST00000047885	ENSMUSP00000047126	TRANSLATION	protein_coding	-	CCDS23779.1	1	467	8	5.01	1.5	187.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000039480	Nt5dc1	ENSMUST00000099973	ENSMUSP00000097553	TRANSLATION	protein_coding	-	-	1	201	4	2.43	0.5	86.7	0	-4,-5	-	-	3.84	MINOR
ENSMUSG00000039480	Nt5dc1	ENSMUST00000213269	ENSMUSP00000150127	TRANSLATION	protein_coding	-	-	5	162	4	2.28	0	83.1	0	-4,-5	-	-	3.54	MINOR
ENSMUSG00000039480	Nt5dc1	ENSMUST00000105512	ENSMUSP00000101151	TRANSLATION	protein_coding	-	-	1	466	8	4.935	1.5	187.2	0	-4,-5	-	-	17.808	ALTERNATIVE:2
ENSMUSG00000039480	Nt5dc1	ENSMUST00000130290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039480	Nt5dc1	ENSMUST00000129363	ENSMUSP00000149497	TRANSLATION	protein_coding	start	-	3	150	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019782	Rwdd1	ENSMUST00000219414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019782	Rwdd1	ENSMUST00000019917	ENSMUSP00000019917	TRANSLATION	protein_coding	-	CCDS23773.1	1	243	0	3.5	14.8	122.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019782	Rwdd1	ENSMUST00000128699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020105	Lrig3	ENSMUST00000074807	ENSMUSP00000074360	TRANSLATION	protein_coding	-	CCDS24219.1	1	1117	0	12.79	0.5	360.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020105	Lrig3	ENSMUST00000220332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020105	Lrig3	ENSMUST00000218593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020105	Lrig3	ENSMUST00000219974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020105	Lrig3	ENSMUST00000217813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020105	Lrig3	ENSMUST00000218580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020105	Lrig3	ENSMUST00000218363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019894	Slc6a15	ENSMUST00000217905	ENSMUSP00000151517	TRANSLATION	protein_coding	stop	-	3	127	0	1.6	0	125.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000019894	Slc6a15	ENSMUST00000179636	ENSMUSP00000136676	TRANSLATION	protein_coding	-	CCDS24156.1	1	729	0	6.97	3.5	755	9	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000019894	Slc6a15	ENSMUST00000218844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019894	Slc6a15	ENSMUST00000219936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019894	Slc6a15	ENSMUST00000074204	ENSMUSP00000073829	TRANSLATION	protein_coding	-	CCDS24156.1	1	729	0	6.97	3.5	755	9	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000095138	Olfr781	ENSMUST00000075613	ENSMUSP00000075041	TRANSLATION	protein_coding	-	CCDS24314.1	-	311	0	0.42	7.6	150.9	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095138	Olfr781	ENSMUST00000204108	ENSMUSP00000145356	TRANSLATION	protein_coding	-	CCDS24314.1	3	311	0	0.42	7.6	150.9	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000435	Myf5	ENSMUST00000000445	ENSMUSP00000000445	TRANSLATION	protein_coding	-	CCDS24161.1	1	255	0	0.8	7.5	226	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096497	Olfr787	ENSMUST00000213329	ENSMUSP00000149391	TRANSLATION	protein_coding	-	CCDS24318.1	5	312	0	0.42	7.5	165.9	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096497	Olfr787	ENSMUST00000077836	ENSMUSP00000077005	TRANSLATION	protein_coding	-	CCDS24318.1	-	312	0	0.42	7.5	165.9	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000113949	Scamp4	ENSMUST00000221236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000113949	Scamp4	ENSMUST00000221387	ENSMUSP00000152469	TRANSLATION	protein_coding	stop	-	5	24	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000113949	Scamp4	ENSMUST00000221032	ENSMUSP00000152749	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	55.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113949	Scamp4	ENSMUST00000220669	ENSMUSP00000152449	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	55.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113949	Scamp4	ENSMUST00000223256	ENSMUSP00000152665	TRANSLATION	nonsense_mediated_decay	-	-	2	41	0	0	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113949	Scamp4	ENSMUST00000180350	ENSMUSP00000137003	TRANSLATION	protein_coding	-	CCDS24028.1	1	230	0	0	14	235.8	4	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000113949	Scamp4	ENSMUST00000079883	ENSMUSP00000078808	TRANSLATION	protein_coding	-	CCDS24028.1	1	230	0	0	14	235.8	4	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000019772	Vip	ENSMUST00000217331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019772	Vip	ENSMUST00000019906	ENSMUSP00000019906	TRANSLATION	protein_coding	-	CCDS56682.1	1	171	0	1	7.5	100	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000037151	Lrrc20	ENSMUST00000049242	ENSMUSP00000048042	TRANSLATION	protein_coding	-	CCDS23881.1	1	184	0	2.21	7.5	27.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074785	Plxnc1	ENSMUST00000218839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074785	Plxnc1	ENSMUST00000180573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074785	Plxnc1	ENSMUST00000180514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074785	Plxnc1	ENSMUST00000181244	ENSMUSP00000138038	TRANSLATION	nonsense_mediated_decay	start	-	3	101	0	0.15	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074785	Plxnc1	ENSMUST00000099337	ENSMUSP00000096939	TRANSLATION	protein_coding	-	CCDS48676.1	1	1574	0	18.884	0.5	777.8	0	1,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020228	Helb	ENSMUST00000154501	ENSMUSP00000116954	TRANSLATION	nonsense_mediated_decay	-	-	5	571	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020228	Helb	ENSMUST00000148241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020228	Helb	ENSMUST00000020449	ENSMUSP00000020449	TRANSLATION	protein_coding	-	CCDS24203.1	1	1074	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000075297	H60b	ENSMUST00000131558	ENSMUSP00000117032	TRANSLATION	protein_coding	-	CCDS48520.1	5	251	0	0.78	0.5	0	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000075297	H60b	ENSMUST00000105522	ENSMUSP00000101161	TRANSLATION	protein_coding	-	CCDS48520.1	1	251	0	0.78	0.5	0	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025355	Mmp19	ENSMUST00000219404	ENSMUSP00000151437	TRANSLATION	protein_coding	-	-	1	455	16	4.28	0.5	289.7	0	-4,-5	-	-	14.226	MINOR
ENSMUSG00000025355	Mmp19	ENSMUST00000026411	ENSMUSP00000026411	TRANSLATION	protein_coding	-	CCDS24292.1	1	527	16	5.205	0.5	321.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025355	Mmp19	ENSMUST00000218021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019880	Rspo3	ENSMUST00000092623	ENSMUSP00000090287	TRANSLATION	protein_coding	-	CCDS23761.1	1	277	0	2	1.5	180.4	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000019880	Rspo3	ENSMUST00000215256	ENSMUSP00000149363	TRANSLATION	protein_coding	start	-	3	186	0	1	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046922	Gpr6	ENSMUST00000061796	ENSMUSP00000057323	TRANSLATION	protein_coding	-	CCDS23802.1	1	363	0	0.42	6.3	108.6	0	-2,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000097854	Gm26602	ENSMUST00000181321	ENSMUSP00000137730	TRANSLATION	protein_coding	start/stop	-	-	95	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000020325	Fstl3	ENSMUST00000168798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020325	Fstl3	ENSMUST00000020575	ENSMUSP00000020575	TRANSLATION	protein_coding	-	CCDS23990.1	1	256	0	3.55	1.5	106.6	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020325	Fstl3	ENSMUST00000170380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038822	Hace1	ENSMUST00000136905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038822	Hace1	ENSMUST00000131568	ENSMUSP00000121196	TRANSLATION	protein_coding	start	-	5	119	0	3.048	0	51.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038822	Hace1	ENSMUST00000155368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038822	Hace1	ENSMUST00000037044	ENSMUSP00000039206	TRANSLATION	protein_coding	-	CCDS23829.1	1	909	4	14.35	8.8	400.1	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000038822	Hace1	ENSMUST00000131406	ENSMUSP00000118554	TRANSLATION	protein_coding	start	-	1	300	3	6.9	0	138.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038822	Hace1	ENSMUST00000142956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038822	Hace1	ENSMUST00000150511	ENSMUSP00000117985	TRANSLATION	protein_coding	start	-	2	329	4	6.93	0	174	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049217	Olfr788	ENSMUST00000213222	ENSMUSP00000151054	TRANSLATION	protein_coding	-	CCDS24319.1	5	311	0	0.36	8.8	167.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049217	Olfr788	ENSMUST00000056961	ENSMUSP00000054710	TRANSLATION	protein_coding	-	CCDS24319.1	-	311	0	0.36	8.8	167.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000112640	Gm32687	ENSMUST00000220314	ENSMUSP00000151266	TRANSLATION	protein_coding	-	-	1	600	68	1.85	0.5	358.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020170	Frs2	ENSMUST00000218868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020170	Frs2	ENSMUST00000020381	ENSMUSP00000020381	TRANSLATION	protein_coding	-	CCDS24190.1	1	508	0	2.75	8.8	86.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020170	Frs2	ENSMUST00000219104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020170	Frs2	ENSMUST00000219483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075266	Cenpw	ENSMUST00000216853	ENSMUSP00000148983	TRANSLATION	protein_coding	-	-	1	84	0	2.13	6.3	148.8	0	-4,-2	-	-	13.178	ALTERNATIVE:1
ENSMUSG00000075266	Cenpw	ENSMUST00000099985	ENSMUSP00000097565	TRANSLATION	protein_coding	-	CCDS35876.1	1	86	0	2.13	6.3	162.5	0	-4,-2	-	-	14	PRINCIPAL:2
ENSMUSG00000020017	Hal	ENSMUST00000129421	ENSMUSP00000123336	TRANSLATION	protein_coding	-	CCDS36036.1	1	657	13	12.3406	7.5	676.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000020017	Hal	ENSMUST00000152883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020017	Hal	ENSMUST00000132624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020017	Hal	ENSMUST00000016031	ENSMUSP00000016031	TRANSLATION	nonsense_mediated_decay	-	-	5	167	0	1.0806	0	30.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039462	Col10a1	ENSMUST00000105511	ENSMUSP00000101150	TRANSLATION	protein_coding	-	CCDS23780.1	2	680	3	0.6	4.2	227.2	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000100004	Taar8c	ENSMUST00000170267	ENSMUSP00000133193	TRANSLATION	protein_coding	-	CCDS23747.1	-	344	0	0.6	5.1	187.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000019916	P4ha1	ENSMUST00000092512	ENSMUSP00000090170	TRANSLATION	protein_coding	-	CCDS83699.1	1	454	7	8.575	0.5	195.8	0	4,-1	-	-	15.984	MINOR
ENSMUSG00000019916	P4ha1	ENSMUST00000009789	ENSMUSP00000009789	TRANSLATION	protein_coding	-	CCDS23863.1	1	534	7	9.35	7.5	196.1	0	4,-1	-	-	20.55	PRINCIPAL:3
ENSMUSG00000019916	P4ha1	ENSMUST00000105466	ENSMUSP00000101106	TRANSLATION	protein_coding	-	CCDS83698.1	1	534	7	9.575	7.5	196.1	0	4,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000039552	Rsph4a	ENSMUST00000169670	ENSMUSP00000131647	TRANSLATION	protein_coding	-	CCDS48534.1	1	716	0	0	0.5	673.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054052	Rdh19	ENSMUST00000077530	ENSMUSP00000076735	TRANSLATION	protein_coding	-	CCDS24253.1	1	318	27	2.4	0.5	143.1	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000058513	Olfr801	ENSMUST00000216067	ENSMUSP00000149555	TRANSLATION	protein_coding	-	CCDS24328.1	5	318	0	1.04	2.7	174.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058513	Olfr801	ENSMUST00000213294	ENSMUSP00000148943	TRANSLATION	protein_coding	-	CCDS24328.1	5	318	0	1.04	2.7	174.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058513	Olfr801	ENSMUST00000072063	ENSMUSP00000071941	TRANSLATION	protein_coding	-	CCDS24328.1	-	318	0	1.04	2.7	174.3	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058513	Olfr801	ENSMUST00000203424	ENSMUSP00000145011	TRANSLATION	protein_coding	stop	-	5	96	0	0.6	0	65.4	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000114004	Gm48552	ENSMUST00000156229	ENSMUSP00000152264	TRANSLATION	protein_coding	-	-	2	135	0	0	1	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000114004	Gm48552	ENSMUST00000125635	ENSMUSP00000152767	TRANSLATION	protein_coding	-	-	3	135	0	0	1	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000020088	Sar1a	ENSMUST00000220372	ENSMUSP00000151339	TRANSLATION	protein_coding	stop	-	2	131	9	3.91	0	156.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020088	Sar1a	ENSMUST00000218968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020088	Sar1a	ENSMUST00000218474	ENSMUSP00000151444	TRANSLATION	protein_coding	stop	-	2	81	9	2.41	0	85	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020088	Sar1a	ENSMUST00000218172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020088	Sar1a	ENSMUST00000020285	ENSMUSP00000020285	TRANSLATION	protein_coding	-	CCDS23883.1	1	198	16	5.66	20.2	214.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000020088	Sar1a	ENSMUST00000219506	ENSMUSP00000151383	TRANSLATION	protein_coding	-	CCDS23883.1	3	198	16	5.66	20.2	214.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000020088	Sar1a	ENSMUST00000219055	ENSMUSP00000151361	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020088	Sar1a	ENSMUST00000219174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020088	Sar1a	ENSMUST00000218741	ENSMUSP00000151885	TRANSLATION	nonsense_mediated_decay	start	-	3	95	9	2.75	0	132.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091618	H60c	ENSMUST00000216211	ENSMUSP00000149470	TRANSLATION	protein_coding	-	-	1	226	0	0	0	0	0	0,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000091618	H60c	ENSMUST00000170893	ENSMUSP00000126536	TRANSLATION	protein_coding	-	CCDS56668.1	1	197	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000091618	H60c	ENSMUST00000214645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020067	Mypn	ENSMUST00000218978	ENSMUSP00000151637	TRANSLATION	protein_coding	-	-	1	200	0	3.2	0	89.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020067	Mypn	ENSMUST00000095580	ENSMUSP00000093240	TRANSLATION	protein_coding	-	CCDS48584.1	1	1315	0	11.184	0.5	343	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053219	Raet1e	ENSMUST00000065527	ENSMUSP00000066627	TRANSLATION	protein_coding	-	CCDS35865.1	1	251	0	3.8	0.5	360.2	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053219	Raet1e	ENSMUST00000178026	ENSMUSP00000136032	TRANSLATION	protein_coding	-	CCDS35865.1	1	251	0	3.8	0.5	360.2	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053219	Raet1e	ENSMUST00000181645	ENSMUSP00000138022	TRANSLATION	protein_coding	-	CCDS35865.1	1	251	0	3.8	0.5	360.2	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053219	Raet1e	ENSMUST00000180648	ENSMUSP00000137946	TRANSLATION	protein_coding	stop	-	3	66	0	1	0	45.7	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000050844	1700020N01Rik	ENSMUST00000057341	ENSMUSP00000054237	TRANSLATION	protein_coding	-	-	1	87	0	0.8	0	62.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050844	1700020N01Rik	ENSMUST00000186635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062931	Zfp938	ENSMUST00000041264	ENSMUSP00000047110	TRANSLATION	protein_coding	-	CCDS48652.1	1	579	46	1.85	1.5	252.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062931	Zfp938	ENSMUST00000156218	ENSMUSP00000121613	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	1.45	1.5	83.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020156	Pwwp3a	ENSMUST00000146538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000141962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000126917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000125784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000020365	ENSMUSP00000020365	TRANSLATION	protein_coding	-	CCDS24014.1	1	682	0	3.7	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020156	Pwwp3a	ENSMUST00000135598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000136208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000136791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020156	Pwwp3a	ENSMUST00000139431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000138801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020156	Pwwp3a	ENSMUST00000130260	ENSMUSP00000117519	TRANSLATION	protein_coding	stop	-	2	219	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020327	Fgf22	ENSMUST00000219981	ENSMUSP00000151917	TRANSLATION	protein_coding	-	-	1	126	0	1.905	0.5	67	0	3,-4	-	-	4.152	MINOR
ENSMUSG00000020327	Fgf22	ENSMUST00000020577	ENSMUSP00000020577	TRANSLATION	protein_coding	start/stop	-	3	221	0	2.139	0	64.8	0	-1,1	-	-	-1	MINOR
ENSMUSG00000020327	Fgf22	ENSMUST00000219228	ENSMUSP00000151743	TRANSLATION	protein_coding	-	CCDS23988.1	1	162	0	3.498	1.5	144.7	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000020101	Vsir	ENSMUST00000164027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020101	Vsir	ENSMUST00000170507	ENSMUSP00000127569	TRANSLATION	protein_coding	stop	-	5	162	0	0.68	0	0	4	2,-3	-	-	-1	MINOR
ENSMUSG00000020101	Vsir	ENSMUST00000105459	ENSMUSP00000101099	TRANSLATION	protein_coding	-	-	5	227	0	0.24	0	29.7	4	-4,-2	-	-	6.402	MINOR
ENSMUSG00000020101	Vsir	ENSMUST00000169621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020101	Vsir	ENSMUST00000020301	ENSMUSP00000020301	TRANSLATION	protein_coding	-	CCDS35912.1	1	309	0	0.88	5.1	37.4	4	2,-3	-	-	14	PRINCIPAL:3
ENSMUSG00000020101	Vsir	ENSMUST00000169139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020101	Vsir	ENSMUST00000105460	ENSMUSP00000101100	TRANSLATION	protein_coding	-	CCDS48569.1	1	308	0	0.88	5.1	37.4	4	2,-3	-	-	14	ALTERNATIVE:1
ENSMUSG00000037171	Nodal	ENSMUST00000049339	ENSMUSP00000039653	TRANSLATION	protein_coding	-	CCDS23878.1	1	354	0	1.4	1.5	102.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020077	Srgn	ENSMUST00000162956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020077	Srgn	ENSMUST00000020271	ENSMUSP00000020271	TRANSLATION	protein_coding	-	CCDS23889.1	1	152	0	0	0.5	221.2	0	4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020077	Srgn	ENSMUST00000160987	ENSMUSP00000125622	TRANSLATION	protein_coding	-	CCDS23889.1	3	152	0	0	0.5	221.2	0	4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020077	Srgn	ENSMUST00000162161	ENSMUSP00000125533	TRANSLATION	protein_coding	-	CCDS23889.1	3	152	0	0	0.5	221.2	0	4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020077	Srgn	ENSMUST00000159020	ENSMUSP00000125385	TRANSLATION	protein_coding	stop	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020077	Srgn	ENSMUST00000160643	ENSMUSP00000124365	TRANSLATION	protein_coding	stop	-	5	27	0	0	0	30.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000004937	Sgta	ENSMUST00000220317	ENSMUSP00000151678	TRANSLATION	protein_coding	stop	-	3	166	0	5	0	123	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004937	Sgta	ENSMUST00000218208	ENSMUSP00000151949	TRANSLATION	protein_coding	-	-	1	314	0	5.75	7.5	164.1	0	-4,-7	-	-	14.502	ALTERNATIVE:1
ENSMUSG00000004937	Sgta	ENSMUST00000219126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004937	Sgta	ENSMUST00000219297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004937	Sgta	ENSMUST00000219401	ENSMUSP00000151345	TRANSLATION	protein_coding	stop	-	2	211	0	5.75	0	164.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004937	Sgta	ENSMUST00000005067	ENSMUSP00000005067	TRANSLATION	protein_coding	-	CCDS35990.1	1	315	0	6	7.5	164.1	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000004937	Sgta	ENSMUST00000220202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059901	Adamts14	ENSMUST00000120336	ENSMUSP00000112723	TRANSLATION	protein_coding	-	-	5	1209	11	7.63	0.5	368.2	0	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000059901	Adamts14	ENSMUST00000092486	ENSMUSP00000090143	TRANSLATION	protein_coding	-	CCDS35915.1	1	1206	11	7.63	1.5	367.9	0	1,-3	-	-	17.982	PRINCIPAL:2
ENSMUSG00000045886	Gm9803	ENSMUST00000057649	ENSMUSP00000137140	TRANSLATION	protein_coding	-	-	-	125	0	0.64	10.8	201.5	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000045886	Gm9803	ENSMUST00000216543	ENSMUSP00000148958	TRANSLATION	protein_coding	-	-	5	97	0	0.64	0	153.3	0	-4,-2	-	-	9.108	MINOR
ENSMUSG00000009093	Gstt4	ENSMUST00000159241	ENSMUSP00000124989	TRANSLATION	nonsense_mediated_decay	-	-	1	49	3	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009093	Gstt4	ENSMUST00000160211	ENSMUSP00000125604	TRANSLATION	protein_coding	-	CCDS23933.1	1	240	13	4.55	6.3	71.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000051354	Samd3	ENSMUST00000219318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051354	Samd3	ENSMUST00000164660	ENSMUSP00000129054	TRANSLATION	protein_coding	-	CCDS48524.1	1	273	0	0	1.5	39.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000051354	Samd3	ENSMUST00000219738	ENSMUSP00000151275	TRANSLATION	protein_coding	start	-	5	78	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051354	Samd3	ENSMUST00000060716	ENSMUSP00000057805	TRANSLATION	protein_coding	-	CCDS48525.1	5	514	0	0	0.5	39.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000051354	Samd3	ENSMUST00000220219	ENSMUSP00000151558	TRANSLATION	protein_coding	-	CCDS48525.1	5	514	0	0	0.5	39.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000051354	Samd3	ENSMUST00000218301	ENSMUSP00000151853	TRANSLATION	protein_coding	-	-	1	300	0	0	0.5	39.9	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000078481	Gm10944	ENSMUST00000105564	ENSMUSP00000101191	TRANSLATION	protein_coding	start/stop	-	5	17	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040280	Ndufa4l2	ENSMUST00000218492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040280	Ndufa4l2	ENSMUST00000035735	ENSMUSP00000042185	TRANSLATION	protein_coding	-	CCDS36080.1	1	87	0	0	9.5	100.5	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000040280	Ndufa4l2	ENSMUST00000218302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000179054	ENSMUSP00000136352	TRANSLATION	protein_coding	-	CCDS56696.1	1	246	0	0.48	0.5	0	0	-4,-7	-	-	4.236	MINOR
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000181677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000181614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000180726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000069372	ENSMUSP00000065555	TRANSLATION	protein_coding	-	CCDS56697.1	1	205	0	0.68	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000097327	E030030I06Rik	ENSMUST00000180697	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000004665	Cnn2	ENSMUST00000004784	ENSMUSP00000004784	TRANSLATION	protein_coding	-	CCDS24003.1	1	305	0	3.99	0.5	226.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004665	Cnn2	ENSMUST00000105374	ENSMUSP00000101013	TRANSLATION	protein_coding	-	-	5	266	0	2.99	0	214.1	0	-4,-7	-	-	9.246	MINOR
ENSMUSG00000020265	Sumo3	ENSMUST00000124024	ENSMUSP00000133789	TRANSLATION	protein_coding	-	-	2	51	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000020265	Sumo3	ENSMUST00000173691	ENSMUSP00000134676	TRANSLATION	protein_coding	start	-	5	47	0	1.198	0	39.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020265	Sumo3	ENSMUST00000099538	ENSMUSP00000097136	TRANSLATION	protein_coding	-	CCDS78843.1	1	110	0	3.196	0.5	89.4	0	-4,-5	-	-	11.472	ALTERNATIVE:2
ENSMUSG00000020265	Sumo3	ENSMUST00000137841	ENSMUSP00000133308	TRANSLATION	nonsense_mediated_decay	-	-	2	82	0	2.66	0	67.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020265	Sumo3	ENSMUST00000141228	ENSMUSP00000133466	TRANSLATION	protein_coding	-	CCDS78841.1	3	96	0	2.96	0.5	67.5	0	-4,-5	-	-	9.528	MINOR
ENSMUSG00000020265	Sumo3	ENSMUST00000174295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020265	Sumo3	ENSMUST00000020501	ENSMUSP00000020501	TRANSLATION	protein_coding	-	CCDS23958.1	1	110	0	3.46	1.5	89.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020265	Sumo3	ENSMUST00000129492	ENSMUSP00000134416	TRANSLATION	protein_coding	-	CCDS78842.1	2	113	0	3.46	1.5	89.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039089	L3mbtl3	ENSMUST00000040219	ENSMUSP00000037619	TRANSLATION	protein_coding	-	CCDS23756.1	5	883	0	10.85	0.5	358.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039089	L3mbtl3	ENSMUST00000218909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039089	L3mbtl3	ENSMUST00000174766	ENSMUSP00000133479	TRANSLATION	protein_coding	-	CCDS23756.1	1	883	0	10.85	0.5	358.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039089	L3mbtl3	ENSMUST00000218665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039089	L3mbtl3	ENSMUST00000218585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039089	L3mbtl3	ENSMUST00000217699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039089	L3mbtl3	ENSMUST00000105519	ENSMUSP00000101158	TRANSLATION	protein_coding	-	CCDS83689.1	1	858	0	10.85	0.5	358.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000069421	Olfr810	ENSMUST00000091986	ENSMUSP00000089612	TRANSLATION	protein_coding	-	CCDS24337.1	-	312	0	0.36	6.4	168.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069421	Olfr810	ENSMUST00000217283	ENSMUSP00000150364	TRANSLATION	protein_coding	-	CCDS24337.1	5	312	0	0.36	6.4	168.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069421	Olfr810	ENSMUST00000214206	ENSMUSP00000149044	TRANSLATION	protein_coding	-	CCDS24337.1	5	312	0	0.36	6.4	168.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069421	Olfr810	ENSMUST00000214878	ENSMUSP00000150931	TRANSLATION	protein_coding	-	CCDS24337.1	5	312	0	0.36	6.4	168.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025359	Pmel	ENSMUST00000054125	ENSMUSP00000051869	TRANSLATION	protein_coding	-	CCDS36091.1	1	626	0	0	0.5	42.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000025359	Pmel	ENSMUST00000217836	ENSMUSP00000151602	TRANSLATION	protein_coding	stop	-	3	189	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000025359	Pmel	ENSMUST00000219157	ENSMUSP00000151621	TRANSLATION	protein_coding	stop	-	5	155	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000038122	Tbc1d32	ENSMUST00000217792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038122	Tbc1d32	ENSMUST00000099739	ENSMUSP00000097328	TRANSLATION	protein_coding	-	CCDS48562.1	5	1296	0	0	4.1	2339	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000038122	Tbc1d32	ENSMUST00000219385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061371	Zfp873	ENSMUST00000211338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061371	Zfp873	ENSMUST00000209614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061371	Zfp873	ENSMUST00000210325	ENSMUSP00000148219	TRANSLATION	protein_coding	-	CCDS36009.2	5	667	77	2.25	0.5	419.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061371	Zfp873	ENSMUST00000209622	ENSMUSP00000147990	TRANSLATION	protein_coding	-	-	2	94	0	1.25	0	75.9	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000061371	Zfp873	ENSMUST00000105313	ENSMUSP00000100950	TRANSLATION	protein_coding	-	CCDS83738.1	1	630	77	0.4	0.5	346.9	0	-4,-5	-	-	8.706	MINOR
ENSMUSG00000040006	Ginm1	ENSMUST00000124838	ENSMUSP00000119129	TRANSLATION	protein_coding	-	CCDS83678.1	1	328	0	0	1.5	0	1	2,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000040006	Ginm1	ENSMUST00000188270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040006	Ginm1	ENSMUST00000039763	ENSMUSP00000040961	TRANSLATION	protein_coding	-	CCDS48495.1	1	327	0	0	1.5	0	1	2,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000040006	Ginm1	ENSMUST00000133796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040006	Ginm1	ENSMUST00000124447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040006	Ginm1	ENSMUST00000065124	ENSMUSP00000070236	TRANSLATION	protein_coding	start	-	-	99	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019948	Actr6	ENSMUST00000218442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019948	Actr6	ENSMUST00000218568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019948	Actr6	ENSMUST00000218965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019948	Actr6	ENSMUST00000020109	ENSMUSP00000020109	TRANSLATION	protein_coding	-	CCDS24118.1	1	396	19	5.655	14.3	279.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019948	Actr6	ENSMUST00000220388	ENSMUSP00000151218	TRANSLATION	nonsense_mediated_decay	-	-	3	88	5	1.635	0	44.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019948	Actr6	ENSMUST00000220059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069520	Tmem19	ENSMUST00000219821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069520	Tmem19	ENSMUST00000220336	ENSMUSP00000151793	TRANSLATION	protein_coding	stop	-	5	81	0	0	0	0	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000069520	Tmem19	ENSMUST00000219597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069520	Tmem19	ENSMUST00000218009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069520	Tmem19	ENSMUST00000219890	ENSMUSP00000152044	TRANSLATION	protein_coding	-	-	5	302	0	0	0	250.4	9	-3,-6	-	-	6	MINOR
ENSMUSG00000069520	Tmem19	ENSMUST00000217884	ENSMUSP00000151753	TRANSLATION	protein_coding	-	-	5	302	0	0	0	250.4	9	-3,-6	-	-	6	MINOR
ENSMUSG00000069520	Tmem19	ENSMUST00000092170	ENSMUSP00000089808	TRANSLATION	protein_coding	-	CCDS24178.1	1	336	0	0	5.1	250.4	12	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000069520	Tmem19	ENSMUST00000218731	ENSMUSP00000151762	TRANSLATION	protein_coding	-	-	1	236	0	0	0.5	217.3	6	-4,-6	-	-	4.014	MINOR
ENSMUSG00000069520	Tmem19	ENSMUST00000217848	ENSMUSP00000151766	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	150.6	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000069520	Tmem19	ENSMUST00000217887	ENSMUSP00000151334	TRANSLATION	protein_coding	-	-	1	351	0	0	0.5	250.4	12	-4,-5	-	-	6	MINOR
ENSMUSG00000019849	Prep	ENSMUST00000099858	ENSMUSP00000097444	TRANSLATION	protein_coding	-	CCDS23826.1	1	710	11	14.25	9.6	792.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020151	Ptprr	ENSMUST00000124369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020151	Ptprr	ENSMUST00000155606	ENSMUSP00000122259	TRANSLATION	protein_coding	-	CCDS48693.1	1	412	12	7.5	1.7	250.8	0	-4,-6	-	-	18.241	ALTERNATIVE:2
ENSMUSG00000020151	Ptprr	ENSMUST00000105271	ENSMUSP00000100907	TRANSLATION	protein_coding	-	CCDS56750.1	1	549	12	7.5	0.5	250.8	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020151	Ptprr	ENSMUST00000128399	ENSMUSP00000114455	TRANSLATION	protein_coding	-	CCDS48693.1	1	412	12	7.5	1.7	250.8	0	-4,-6	-	-	18.241	ALTERNATIVE:2
ENSMUSG00000020151	Ptprr	ENSMUST00000142617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020151	Ptprr	ENSMUST00000063470	ENSMUSP00000064392	TRANSLATION	protein_coding	-	CCDS24182.1	1	656	12	7.5	3.9	250.8	1	1,-4	-	-	19	PRINCIPAL:3
ENSMUSG00000020151	Ptprr	ENSMUST00000148731	ENSMUSP00000120965	TRANSLATION	protein_coding	-	CCDS48693.1	5	412	12	7.5	1.7	250.8	0	-4,-6	-	-	18.241	ALTERNATIVE:2
ENSMUSG00000020255	D10Wsu102e	ENSMUST00000020488	ENSMUSP00000020488	TRANSLATION	protein_coding	-	CCDS24076.1	1	185	0	0	1.5	55.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020262	Adarb1	ENSMUST00000144547	ENSMUSP00000122102	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020262	Adarb1	ENSMUST00000155117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000149738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000126073	ENSMUSP00000114608	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020262	Adarb1	ENSMUST00000150512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000146319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000154607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000105404	ENSMUSP00000101044	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020262	Adarb1	ENSMUST00000150227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000156583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020262	Adarb1	ENSMUST00000020496	ENSMUSP00000020496	TRANSLATION	protein_coding	-	CCDS35949.1	1	701	20	8	6.3	478	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020262	Adarb1	ENSMUST00000105406	ENSMUSP00000101046	TRANSLATION	protein_coding	-	CCDS35948.1	1	711	20	7.835	1.5	474.6	0	-4,-5	-	-	17.654	MINOR
ENSMUSG00000020262	Adarb1	ENSMUST00000098374	ENSMUSP00000095976	TRANSLATION	protein_coding	-	CCDS35948.1	1	711	20	7.835	1.5	474.6	0	-4,-5	-	-	17.654	MINOR
ENSMUSG00000069712	4930444G20Rik	ENSMUST00000092672	ENSMUSP00000097613	TRANSLATION	protein_coding	-	CCDS48519.1	-	495	5	0.8	0.5	145.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000090439	Gm17455	ENSMUST00000218360	ENSMUSP00000156882	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000090439	Gm17455	ENSMUST00000164428	ENSMUSP00000129705	TRANSLATION	protein_coding	-	CCDS48570.1	3	128	0	0	1.5	0	1	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000090439	Gm17455	ENSMUST00000218974	ENSMUSP00000156413	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000009070	Rsph14	ENSMUST00000179546	ENSMUSP00000136715	TRANSLATION	protein_coding	-	CCDS48596.1	1	341	0	4.4186	1.5	48	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000009070	Rsph14	ENSMUST00000160072	ENSMUSP00000123760	TRANSLATION	protein_coding	stop	-	3	161	0	2.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009070	Rsph14	ENSMUST00000009214	ENSMUSP00000009214	TRANSLATION	protein_coding	-	CCDS48596.1	1	341	0	4.4186	1.5	48	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000009070	Rsph14	ENSMUST00000159994	ENSMUSP00000125669	TRANSLATION	protein_coding	-	-	5	154	0	1.56	1	0	0	-4,-5	-	-	0.282	MINOR
ENSMUSG00000009070	Rsph14	ENSMUST00000166088	ENSMUSP00000131632	TRANSLATION	protein_coding	-	CCDS48597.1	5	374	0	4.4186	0.5	48	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000009070	Rsph14	ENSMUST00000160450	ENSMUSP00000125289	TRANSLATION	protein_coding	stop	-	5	226	0	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009070	Rsph14	ENSMUST00000159761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038010	Ccdc138	ENSMUST00000036576	ENSMUSP00000043040	TRANSLATION	protein_coding	-	CCDS48565.1	1	680	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000038010	Ccdc138	ENSMUST00000217992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015890	Amdhd1	ENSMUST00000016034	ENSMUSP00000016034	TRANSLATION	protein_coding	-	CCDS48671.1	1	426	4	6.16	5.1	70.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000019996	Map7	ENSMUST00000213386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019996	Map7	ENSMUST00000216065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019996	Map7	ENSMUST00000217251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000216909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000215924	ENSMUSP00000150818	TRANSLATION	protein_coding	stop	-	2	147	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019996	Map7	ENSMUST00000213312	ENSMUSP00000151101	TRANSLATION	protein_coding	-	-	1	242	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019996	Map7	ENSMUST00000215812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000216308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000216474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000214823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019996	Map7	ENSMUST00000020173	ENSMUSP00000020173	TRANSLATION	protein_coding	-	-	1	730	0	0	0.5	145.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019996	Map7	ENSMUST00000116259	ENSMUSP00000111963	TRANSLATION	protein_coding	-	CCDS56694.1	1	738	0	0	0.5	145.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000019996	Map7	ENSMUST00000214231	ENSMUSP00000149367	TRANSLATION	protein_coding	-	-	3	101	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000112653	Gm36176	ENSMUST00000218749	ENSMUSP00000152023	TRANSLATION	protein_coding	-	-	-	158	0	0	0.5	48.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034974	Dapk3	ENSMUST00000219329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034974	Dapk3	ENSMUST00000220076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034974	Dapk3	ENSMUST00000178422	ENSMUSP00000137333	TRANSLATION	protein_coding	-	CCDS24045.1	1	448	19	4.95	1.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034974	Dapk3	ENSMUST00000219133	ENSMUSP00000151254	TRANSLATION	protein_coding	stop	-	3	256	19	4.25	0	225.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034974	Dapk3	ENSMUST00000219944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034974	Dapk3	ENSMUST00000218698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034974	Dapk3	ENSMUST00000218227	ENSMUSP00000151499	TRANSLATION	protein_coding	start/stop	-	3	135	0	2.2	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034974	Dapk3	ENSMUST00000217936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034974	Dapk3	ENSMUST00000219850	ENSMUSP00000151577	TRANSLATION	protein_coding	-	CCDS24045.1	1	448	19	4.95	1.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034974	Dapk3	ENSMUST00000047665	ENSMUSP00000035962	TRANSLATION	protein_coding	-	CCDS24045.1	5	448	19	4.95	1.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034974	Dapk3	ENSMUST00000218157	ENSMUSP00000151297	TRANSLATION	protein_coding	stop	-	3	205	19	3.25	0	199.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095171	Taar7b	ENSMUST00000092658	ENSMUSP00000090328	TRANSLATION	protein_coding	-	CCDS23741.1	-	358	0	0.48	1.5	192.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020059	Sycp3	ENSMUST00000123244	ENSMUSP00000137704	TRANSLATION	nonsense_mediated_decay	-	-	1	108	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020059	Sycp3	ENSMUST00000125612	ENSMUSP00000137800	TRANSLATION	protein_coding	-	-	1	248	0	4.75	0	186.8	0	-4,-5	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000020059	Sycp3	ENSMUST00000020252	ENSMUSP00000020252	TRANSLATION	protein_coding	-	CCDS24111.1	1	254	0	5.25	0.5	186.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000046807	Lrrc75b	ENSMUST00000220172	ENSMUSP00000151527	TRANSLATION	protein_coding	start	-	2	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046807	Lrrc75b	ENSMUST00000051129	ENSMUSP00000053085	TRANSLATION	protein_coding	-	CCDS35937.1	1	306	0	0	1.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000035011	Zbtb7a	ENSMUST00000125261	ENSMUSP00000114470	TRANSLATION	protein_coding	stop	-	2	174	0	2	0	115.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035011	Zbtb7a	ENSMUST00000117956	ENSMUSP00000113428	TRANSLATION	protein_coding	-	CCDS35991.1	1	569	15	2.8	1.5	162	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035011	Zbtb7a	ENSMUST00000119606	ENSMUSP00000113612	TRANSLATION	protein_coding	-	CCDS35991.1	1	569	15	2.8	1.5	162	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035011	Zbtb7a	ENSMUST00000048128	ENSMUSP00000047333	TRANSLATION	protein_coding	-	CCDS35991.1	1	569	15	2.8	1.5	162	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035011	Zbtb7a	ENSMUST00000146895	ENSMUSP00000120987	TRANSLATION	protein_coding	stop	-	3	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035011	Zbtb7a	ENSMUST00000121840	ENSMUSP00000113787	TRANSLATION	protein_coding	-	-	1	415	6	2.2	0	115.2	0	-4,-5	-	-	7.908	MINOR
ENSMUSG00000069706	Taar5	ENSMUST00000092659	ENSMUSP00000090329	TRANSLATION	protein_coding	-	CCDS23738.1	-	337	0	0.64	5.1	178.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000038916	Soga3	ENSMUST00000213243	ENSMUSP00000150922	TRANSLATION	protein_coding	start/stop	-	5	199	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038916	Soga3	ENSMUST00000214863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038916	Soga3	ENSMUST00000213451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038916	Soga3	ENSMUST00000216757	ENSMUSP00000149304	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000038916	Soga3	ENSMUST00000092629	ENSMUSP00000090293	TRANSLATION	protein_coding	-	CCDS35875.1	5	945	0	0	1.5	213.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096640	Gm4312	ENSMUST00000190264	ENSMUSP00000139588	TRANSLATION	protein_coding	-	-	-	289	0	0.8	0.5	48.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071359	Tbpl1	ENSMUST00000095794	ENSMUSP00000093470	TRANSLATION	protein_coding	-	CCDS23730.1	1	186	0	4.38	19.5	151.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000071359	Tbpl1	ENSMUST00000138022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071359	Tbpl1	ENSMUST00000127698	ENSMUSP00000114223	TRANSLATION	protein_coding	-	CCDS23730.1	1	186	0	4.38	19.5	151.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000071359	Tbpl1	ENSMUST00000141569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019866	Crybg1	ENSMUST00000200401	ENSMUSP00000143429	TRANSLATION	protein_coding	-	-	5	2065	8	10.2	0.5	482.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019866	Crybg1	ENSMUST00000239010	ENSMUSP00000158875	TRANSLATION	protein_coding	stop	-	-	291	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019866	Crybg1	ENSMUST00000020017	ENSMUSP00000020017	TRANSLATION	protein_coding	-	CCDS48553.1	5	1691	8	10.2	0.5	482.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000070601	Vmn2r84	ENSMUST00000094502	ENSMUSP00000092079	TRANSLATION	protein_coding	-	CCDS36093.1	5	849	4	3.5192	0.5	385.7	7	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000070601	Vmn2r84	ENSMUST00000233031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070601	Vmn2r84	ENSMUST00000232731	ENSMUSP00000156915	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000070601	Vmn2r84	ENSMUST00000233146	ENSMUSP00000156942	TRANSLATION	protein_coding	-	-	-	792	4	3.0392	0	382.6	7	1,-3	-	-	14.854	MINOR
ENSMUSG00000020018	Snrpf	ENSMUST00000020203	ENSMUSP00000020203	TRANSLATION	protein_coding	-	CCDS48672.1	1	86	5	2.5	13.8	75.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020115	Tbk1	ENSMUST00000219493	ENSMUSP00000151935	TRANSLATION	protein_coding	stop	-	3	108	10	2.75	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020115	Tbk1	ENSMUST00000218460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020115	Tbk1	ENSMUST00000219400	ENSMUSP00000151440	TRANSLATION	nonsense_mediated_decay	-	-	2	121	13	3.25	0	59.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020115	Tbk1	ENSMUST00000219439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020115	Tbk1	ENSMUST00000020316	ENSMUSP00000020316	TRANSLATION	protein_coding	-	CCDS24212.1	1	729	17	18.3	11.5	154	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020115	Tbk1	ENSMUST00000219244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020115	Tbk1	ENSMUST00000220386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048745	Olfr820	ENSMUST00000215791	ENSMUSP00000150332	TRANSLATION	protein_coding	-	CCDS24345.1	5	312	0	0.32	6.4	161.3	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048745	Olfr820	ENSMUST00000059244	ENSMUSP00000052995	TRANSLATION	protein_coding	-	CCDS24345.1	-	312	0	0.32	6.4	161.3	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048745	Olfr820	ENSMUST00000214917	ENSMUSP00000150464	TRANSLATION	protein_coding	-	CCDS24345.1	5	312	0	0.32	6.4	161.3	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000004933	Matk	ENSMUST00000151660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004933	Matk	ENSMUST00000148735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004933	Matk	ENSMUST00000130282	ENSMUSP00000114233	TRANSLATION	protein_coding	stop	-	3	101	0	2.75	0	32.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004933	Matk	ENSMUST00000120265	ENSMUSP00000113666	TRANSLATION	protein_coding	-	CCDS70077.1	5	466	18	10.43	7.5	397.5	0	-4,-6	-	-	20.4	ALTERNATIVE:1
ENSMUSG00000004933	Matk	ENSMUST00000119547	ENSMUSP00000113576	TRANSLATION	protein_coding	-	CCDS70078.1	1	465	18	10.43	7.5	397.5	0	-4,-6	-	-	20.4	ALTERNATIVE:1
ENSMUSG00000004933	Matk	ENSMUST00000128576	ENSMUSP00000122445	TRANSLATION	nonsense_mediated_decay	-	-	1	162	0	3.816	0	101.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004933	Matk	ENSMUST00000150605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004933	Matk	ENSMUST00000105328	ENSMUSP00000100965	TRANSLATION	protein_coding	-	CCDS70078.1	1	465	18	10.43	7.5	397.5	0	-4,-6	-	-	20.4	ALTERNATIVE:1
ENSMUSG00000004933	Matk	ENSMUST00000121205	ENSMUSP00000113043	TRANSLATION	protein_coding	-	CCDS70077.1	1	466	18	10.43	7.5	397.5	0	-4,-6	-	-	20.4	PRINCIPAL:4
ENSMUSG00000004933	Matk	ENSMUST00000117488	ENSMUSP00000113221	TRANSLATION	protein_coding	-	CCDS24048.1	1	505	18	10.73	2.9	397.5	0	-4,0	-	-	18.876	MINOR
ENSMUSG00000004933	Matk	ENSMUST00000126720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015757	Ppil4	ENSMUST00000137346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015757	Ppil4	ENSMUST00000015901	ENSMUSP00000015901	TRANSLATION	protein_coding	-	CCDS23690.1	1	492	7	4.53	7.5	191.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015757	Ppil4	ENSMUST00000138151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015757	Ppil4	ENSMUST00000143214	ENSMUSP00000119332	TRANSLATION	nonsense_mediated_decay	-	-	5	68	2	2.25	0	57.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020037	Rfx4	ENSMUST00000166696	ENSMUSP00000128690	TRANSLATION	protein_coding	-	-	1	592	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020037	Rfx4	ENSMUST00000060397	ENSMUSP00000051107	TRANSLATION	protein_coding	-	CCDS24082.1	1	735	0	2.45	7.3	117.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020037	Rfx4	ENSMUST00000173479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020037	Rfx4	ENSMUST00000165868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020037	Rfx4	ENSMUST00000020226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020037	Rfx4	ENSMUST00000095388	ENSMUSP00000093035	TRANSLATION	protein_coding	-	CCDS24083.1	1	641	0	0.4	5.1	0	0	-4,-5	-	-	2.931	MINOR
ENSMUSG00000091415	Ak9	ENSMUST00000173494	ENSMUSP00000134177	TRANSLATION	protein_coding	-	-	5	1894	34	5.02	0	149.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063804	Lin28b	ENSMUST00000214555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063804	Lin28b	ENSMUST00000079390	ENSMUSP00000078361	TRANSLATION	protein_coding	-	CCDS35895.1	1	271	8	2.8	1.5	99.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063804	Lin28b	ENSMUST00000215708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042774	Olfr1353	ENSMUST00000204849	ENSMUSP00000145454	TRANSLATION	protein_coding	-	CCDS23972.1	-	309	0	0.42	6.3	164.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000042774	Olfr1353	ENSMUST00000039718	ENSMUSP00000038992	TRANSLATION	protein_coding	-	CCDS23972.1	2	309	0	0.42	6.3	164.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000042774	Olfr1353	ENSMUST00000205193	ENSMUSP00000145073	TRANSLATION	protein_coding	-	CCDS23972.1	5	309	0	0.42	6.3	164.4	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000005897	Nr2c1	ENSMUST00000105290	ENSMUSP00000100927	TRANSLATION	protein_coding	-	CCDS24131.1	1	590	8	7.36	1.5	243.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005897	Nr2c1	ENSMUST00000092213	ENSMUSP00000089858	TRANSLATION	protein_coding	-	CCDS24131.1	5	590	8	7.36	1.5	243.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005897	Nr2c1	ENSMUST00000099343	ENSMUSP00000096945	TRANSLATION	protein_coding	-	CCDS24131.1	1	590	8	7.36	1.5	243.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025795	Rassf3	ENSMUST00000219500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025795	Rassf3	ENSMUST00000026902	ENSMUSP00000026902	TRANSLATION	protein_coding	-	CCDS24211.1	1	232	0	3	2.7	153.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079685	Ulbp1	ENSMUST00000218717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079685	Ulbp1	ENSMUST00000218736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079685	Ulbp1	ENSMUST00000169796	ENSMUSP00000128204	TRANSLATION	protein_coding	-	-	1	306	0	1.56	0	0	3	0,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000079685	Ulbp1	ENSMUST00000177585	ENSMUSP00000136637	TRANSLATION	protein_coding	-	CCDS56691.1	1	334	0	1.56	0.5	0	3	0,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000079685	Ulbp1	ENSMUST00000218087	ENSMUSP00000151680	TRANSLATION	protein_coding	-	-	1	249	0	1.16	0	0	3	0,-3	-	-	4.464	MINOR
ENSMUSG00000111732	Olfr785	ENSMUST00000204402	ENSMUSP00000145040	TRANSLATION	protein_coding	-	CCDS83768.1	5	312	0	0.28	7.5	168.4	0	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233963	ENSMUSP00000156547	TRANSLATION	protein_coding	-	-	-	595	5	2.94	0	251.1	14	3,-2	-	-	10.16	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000170596	ENSMUSP00000130114	TRANSLATION	protein_coding	-	CCDS48617.1	5	865	5	3.36	0.5	368.9	14	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233445	ENSMUSP00000156464	TRANSLATION	nonsense_mediated_decay	-	-	-	530	0	1.94	0	117.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233694	ENSMUSP00000156779	TRANSLATION	protein_coding	-	-	-	235	3	1.72	0	57.1	0	3,-2	-	-	5.718	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000232824	ENSMUSP00000156858	TRANSLATION	protein_coding	-	-	-	519	5	2.14	0	251.1	14	3,-2	-	-	8.558	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233447	ENSMUSP00000156916	TRANSLATION	protein_coding	-	-	-	311	3	2.52	0	56.5	0	3,-2	-	-	7.32	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233444	ENSMUSP00000156861	TRANSLATION	protein_coding	-	-	-	581	3	2.94	0	174.3	0	3,-2	-	-	8.16	MINOR
ENSMUSG00000091468	Vmn2r82	ENSMUST00000233223	ENSMUSP00000156814	TRANSLATION	nonsense_mediated_decay	-	-	-	260	0	1.52	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025417	Pip4k2c	ENSMUST00000013970	ENSMUSP00000013970	TRANSLATION	protein_coding	-	CCDS24232.1	1	421	2	9.25	6.3	233.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000025417	Pip4k2c	ENSMUST00000218386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078488	Gm10945	ENSMUST00000105596	ENSMUSP00000101221	TRANSLATION	protein_coding	start/stop	-	5	20	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000038624	Nepn	ENSMUST00000219730	ENSMUSP00000151395	TRANSLATION	protein_coding	stop	-	2	201	0	0.8	0	53.6	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000038624	Nepn	ENSMUST00000067085	ENSMUSP00000070130	TRANSLATION	protein_coding	-	CCDS23840.1	1	512	0	2.68	5.1	164.5	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000025405	Inhbc	ENSMUST00000026472	ENSMUSP00000026472	TRANSLATION	protein_coding	-	CCDS24240.1	1	352	0	0.96	0.5	100.3	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040462	Os9	ENSMUST00000164259	ENSMUSP00000128914	TRANSLATION	protein_coding	-	CCDS48713.1	1	672	9	3.95	0.5	59	0	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000040462	Os9	ENSMUST00000080975	ENSMUSP00000079770	TRANSLATION	protein_coding	-	CCDS24229.1	1	617	9	3.95	0.5	59	0	1,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000040462	Os9	ENSMUST00000218798	ENSMUSP00000151466	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000218695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019943	Atp2b1	ENSMUST00000219557	ENSMUSP00000151791	TRANSLATION	protein_coding	stop	-	2	212	0	0.36	0	57.1	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000219090	ENSMUSP00000151934	TRANSLATION	protein_coding	start	-	2	175	0	1.952	0	66.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000220104	ENSMUSP00000151572	TRANSLATION	protein_coding	start	-	5	317	0	0.76	0	175.5	7	-1,-4	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000218948	ENSMUSP00000151441	TRANSLATION	protein_coding	start	-	5	245	0	1.21	0	133.5	8	-4,-2	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000220124	ENSMUSP00000151970	TRANSLATION	protein_coding	start	-	5	279	0	1.54	0	176.9	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000219624	ENSMUSP00000151598	TRANSLATION	protein_coding	stop	-	5	430	2	3.01	0	149	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000019943	Atp2b1	ENSMUST00000218312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019943	Atp2b1	ENSMUST00000220358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019943	Atp2b1	ENSMUST00000020107	ENSMUSP00000020107	TRANSLATION	protein_coding	-	CCDS24145.1	5	1220	7	11.34	13	537.1	14	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019943	Atp2b1	ENSMUST00000218419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035835	Plppr3	ENSMUST00000163111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035835	Plppr3	ENSMUST00000166057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035835	Plppr3	ENSMUST00000170910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035835	Plppr3	ENSMUST00000167250	ENSMUSP00000130695	TRANSLATION	protein_coding	-	CCDS48622.1	2	454	0	0	0.5	51.7	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000035835	Plppr3	ENSMUST00000167897	ENSMUSP00000127972	TRANSLATION	protein_coding	stop	-	3	217	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000035835	Plppr3	ENSMUST00000167707	ENSMUSP00000132994	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000035835	Plppr3	ENSMUST00000092325	ENSMUSP00000089979	TRANSLATION	protein_coding	-	CCDS35971.1	1	716	0	0	1.5	51.7	9	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000035835	Plppr3	ENSMUST00000113452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035835	Plppr3	ENSMUST00000165601	ENSMUSP00000128681	TRANSLATION	protein_coding	stop	-	3	266	0	0	0	44.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000035835	Plppr3	ENSMUST00000166023	ENSMUSP00000127171	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000116429	Ddit3	ENSMUST00000230446	ENSMUSP00000155363	TRANSLATION	protein_coding	-	-	-	34	3	0	0	0	0	-4,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000034667	Xpot	ENSMUST00000217865	ENSMUSP00000151828	TRANSLATION	protein_coding	start/stop	-	3	206	0	3.22	0	47.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034667	Xpot	ENSMUST00000219334	ENSMUSP00000151253	TRANSLATION	protein_coding	start	-	3	51	0	1.262	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034667	Xpot	ENSMUST00000218004	ENSMUSP00000151722	TRANSLATION	protein_coding	-	-	5	962	0	12.677	15.7	168.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034667	Xpot	ENSMUST00000039810	ENSMUSP00000043488	TRANSLATION	protein_coding	-	-	5	963	0	12.677	0	161.6	0	-4,-5	-	-	11.592	MINOR
ENSMUSG00000034667	Xpot	ENSMUST00000218973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036499	Eea1	ENSMUST00000053484	ENSMUSP00000061493	TRANSLATION	protein_coding	-	CCDS36042.1	1	1411	12	4.6	2.7	68	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036499	Eea1	ENSMUST00000218291	ENSMUSP00000151703	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036499	Eea1	ENSMUST00000218517	ENSMUSP00000151611	TRANSLATION	nonsense_mediated_decay	-	-	1	131	4	1.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036499	Eea1	ENSMUST00000218088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036499	Eea1	ENSMUST00000219207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051652	Lrrc3	ENSMUST00000057608	ENSMUSP00000059570	TRANSLATION	protein_coding	-	CCDS23960.1	1	257	0	0.6	3.9	92	0	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000035852	Misp	ENSMUST00000219305	ENSMUSP00000151529	TRANSLATION	protein_coding	-	CCDS23992.1	1	648	0	0	1.5	488.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035852	Misp	ENSMUST00000218531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035852	Misp	ENSMUST00000169041	ENSMUSP00000130071	TRANSLATION	protein_coding	-	CCDS23992.1	1	648	0	0	1.5	488.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035852	Misp	ENSMUST00000046833	ENSMUSP00000048893	TRANSLATION	protein_coding	-	CCDS23992.1	1	648	0	0	1.5	488.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035852	Misp	ENSMUST00000218687	ENSMUSP00000151945	TRANSLATION	protein_coding	stop	-	2	262	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035852	Misp	ENSMUST00000219734	ENSMUSP00000151839	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025422	Agap2	ENSMUST00000239120	ENSMUSP00000158894	TRANSLATION	protein_coding	-	-	-	856	20	10.38	3.4	218.1	0	-4,-1	-	-	19	ALTERNATIVE:2
ENSMUSG00000025422	Agap2	ENSMUST00000039259	ENSMUSP00000043466	TRANSLATION	protein_coding	-	CCDS24228.1	1	1186	20	10.38	2.7	218.1	0	-3,0	-	-	18.708	PRINCIPAL:2
ENSMUSG00000025422	Agap2	ENSMUST00000217941	ENSMUSP00000151946	TRANSLATION	protein_coding	-	-	1	1166	20	10.38	2.7	218.1	0	-3,0	-	-	18.708	ALTERNATIVE:2
ENSMUSG00000037876	Jmjd1c	ENSMUST00000219563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000174408	ENSMUSP00000134551	TRANSLATION	protein_coding	-	-	5	2531	0	8.55	0.5	39.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037876	Jmjd1c	ENSMUST00000174317	ENSMUSP00000134246	TRANSLATION	protein_coding	stop	-	1	744	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000051446	ENSMUSP00000056227	TRANSLATION	protein_coding	-	CCDS56707.1	5	2530	0	8.55	0.5	39.4	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000174062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173689	ENSMUSP00000133700	TRANSLATION	protein_coding	-	CCDS56708.1	2	2350	0	8.55	0.5	39.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000037876	Jmjd1c	ENSMUST00000173187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052151	Plpp2	ENSMUST00000163602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052151	Plpp2	ENSMUST00000166804	ENSMUSP00000133247	TRANSLATION	protein_coding	-	CCDS78849.1	1	220	5	0	1.5	97.8	4	1,-3	-	-	11	ALTERNATIVE:2
ENSMUSG00000052151	Plpp2	ENSMUST00000063879	ENSMUSP00000069670	TRANSLATION	protein_coding	-	CCDS35966.1	1	276	5	0	1.5	97.8	6	-2,-5	-	-	11	PRINCIPAL:3
ENSMUSG00000052151	Plpp2	ENSMUST00000218241	ENSMUSP00000151683	TRANSLATION	protein_coding	-	-	3	158	5	0	0.5	87.7	3	-4,-5	-	-	10.382	ALTERNATIVE:2
ENSMUSG00000052151	Plpp2	ENSMUST00000165233	ENSMUSP00000127000	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025401	Myo1a	ENSMUST00000079590	ENSMUSP00000078540	TRANSLATION	protein_coding	-	CCDS36083.1	1	1043	15	21.64	7.5	1091.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025401	Myo1a	ENSMUST00000219882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055170	Ifng	ENSMUST00000220309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055170	Ifng	ENSMUST00000068592	ENSMUSP00000063800	TRANSLATION	protein_coding	-	CCDS24200.1	1	155	0	3	1.5	182.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020277	Pfkl	ENSMUST00000149271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020277	Pfkl	ENSMUST00000218383	ENSMUSP00000151375	TRANSLATION	nonsense_mediated_decay	-	-	3	64	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020277	Pfkl	ENSMUST00000020522	ENSMUSP00000020522	TRANSLATION	protein_coding	-	CCDS35955.1	1	780	46	19.83	7.5	688.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020277	Pfkl	ENSMUST00000145716	ENSMUSP00000151752	TRANSLATION	protein_coding	stop	-	5	167	21	3.83	0	172.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020277	Pfkl	ENSMUST00000148818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020277	Pfkl	ENSMUST00000218921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020277	Pfkl	ENSMUST00000220304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020277	Pfkl	ENSMUST00000220064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052613	Pcdh15	ENSMUST00000146682	ENSMUSP00000134863	TRANSLATION	protein_coding	-	-	1	415	0	0.12	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000177107	ENSMUSP00000135501	TRANSLATION	protein_coding	-	CCDS56713.1	5	1682	74	25.448	0.5	396.3	2	2,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000105424	ENSMUSP00000101064	TRANSLATION	protein_coding	-	CCDS56715.1	5	1938	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000193739	ENSMUSP00000142173	TRANSLATION	protein_coding	-	-	5	1677	74	25.448	0.5	396.3	2	2,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000148572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000177420	ENSMUSP00000135849	TRANSLATION	protein_coding	-	CCDS56712.1	1	1176	67	23.67	0.5	361.1	0	2,-2	-	-	7.002	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000139106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000125006	ENSMUSP00000120056	TRANSLATION	protein_coding	-	CCDS56714.1	1	1171	67	23.67	0.5	361.1	0	3,-2	-	-	7.002	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000194729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000147455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052613	Pcdh15	ENSMUST00000125517	ENSMUSP00000115399	TRANSLATION	protein_coding	-	-	1	719	17	10.282	0	40.2	0	3,-2	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000127928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052613	Pcdh15	ENSMUST00000193174	ENSMUSP00000142238	TRANSLATION	protein_coding	-	-	5	1783	74	25.778	0	366	2	3,-2	-	-	16.182	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000131321	ENSMUSP00000122911	TRANSLATION	protein_coding	-	CCDS56718.1	1	1936	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000191854	ENSMUSP00000141973	TRANSLATION	protein_coding	-	CCDS56717.1	5	1677	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000064562	ENSMUSP00000068561	TRANSLATION	protein_coding	-	-	5	1865	73	23.968	0.5	337.8	2	3,-2	-	-	10.206	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000128843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000195531	ENSMUSP00000141920	TRANSLATION	protein_coding	-	-	5	1714	74	25.448	0	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000126920	ENSMUSP00000121939	TRANSLATION	protein_coding	-	CCDS56720.1	5	1916	72	24.698	0.5	396.3	2	3,-2	-	-	14.508	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000152819	ENSMUSP00000123647	TRANSLATION	protein_coding	-	-	1	650	13	8.282	0	40.2	0	3,-2	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000193361	ENSMUSP00000141792	TRANSLATION	protein_coding	-	CCDS35934.1	5	1943	74	25.448	0.5	396.3	2	2,-2	-	-	17.34	PRINCIPAL:3
ENSMUSG00000052613	Pcdh15	ENSMUST00000155701	ENSMUSP00000135495	TRANSLATION	protein_coding	-	-	1	334	13	7.15	0	40.2	0	3,-2	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000194315	ENSMUSP00000141594	TRANSLATION	protein_coding	start	-	5	1333	46	11.898	0	278.3	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000123398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000192370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052613	Pcdh15	ENSMUST00000144302	ENSMUSP00000122606	TRANSLATION	nonsense_mediated_decay	-	-	2	326	13	6.45	0	40.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000191709	ENSMUSP00000142313	TRANSLATION	protein_coding	-	-	5	1781	74	25.58	0.5	396.3	2	2,-2	-	-	17.604	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000092420	ENSMUSP00000090076	TRANSLATION	protein_coding	-	CCDS48594.1	1	1933	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000149977	ENSMUSP00000118833	TRANSLATION	protein_coding	-	-	5	1675	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000125055	ENSMUSP00000114326	TRANSLATION	nonsense_mediated_decay	-	-	5	684	29	14.15	0	118	0	3,-2	-	-	-1	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000105429	ENSMUSP00000101069	TRANSLATION	protein_coding	-	CCDS56719.1	5	1867	73	23.968	0.5	337.8	2	3,-2	-	-	10.206	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000156999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052613	Pcdh15	ENSMUST00000131724	ENSMUSP00000122466	TRANSLATION	protein_coding	-	CCDS56716.1	5	1518	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000052613	Pcdh15	ENSMUST00000129404	ENSMUSP00000117731	TRANSLATION	protein_coding	-	CCDS56721.1	5	1913	72	24.698	0.5	396.3	2	3,-2	-	-	14.508	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000134009	ENSMUSP00000120618	TRANSLATION	protein_coding	-	-	1	650	22	14.29	0	122	0	3,-2	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000124046	ENSMUSP00000121130	TRANSLATION	protein_coding	-	-	5	1129	60	16.496	0	325.8	2	-4,-5	-	-	1.77	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000147189	ENSMUSP00000122940	TRANSLATION	protein_coding	-	CCDS48595.1	1	1896	73	24.448	0.5	356.1	2	3,-2	-	-	12.264	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000151116	ENSMUSP00000119662	TRANSLATION	protein_coding	-	CCDS56711.1	5	1790	74	25.778	0.5	366	2	2,-2	-	-	16.182	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000152655	ENSMUSP00000118201	TRANSLATION	protein_coding	-	-	1	981	32	15.762	0	164	0	3,-2	-	-	0	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000136096	ENSMUSP00000121534	TRANSLATION	nonsense_mediated_decay	-	-	2	684	29	14.15	0	118	0	3,-2	-	-	-1	MINOR
ENSMUSG00000052613	Pcdh15	ENSMUST00000105426	ENSMUSP00000101066	TRANSLATION	protein_coding	-	CCDS56718.1	5	1936	74	25.448	0.5	396.3	2	3,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000020140	Lgr5	ENSMUST00000173740	ENSMUSP00000133707	TRANSLATION	protein_coding	-	-	5	835	0	12.75	0	211.3	9	3,-2	-	-	6.99	MINOR
ENSMUSG00000020140	Lgr5	ENSMUST00000020350	ENSMUSP00000020350	TRANSLATION	protein_coding	-	CCDS24180.1	1	907	0	13.75	2.7	261.5	9	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020140	Lgr5	ENSMUST00000149008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020140	Lgr5	ENSMUST00000144732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020140	Lgr5	ENSMUST00000173619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020140	Lgr5	ENSMUST00000129309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020140	Lgr5	ENSMUST00000105272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020140	Lgr5	ENSMUST00000172806	ENSMUSP00000133860	TRANSLATION	protein_coding	-	-	5	883	0	13	1.2	221.8	9	3,-2	-	-	8.118	MINOR
ENSMUSG00000004207	Psap	ENSMUST00000179238	ENSMUSP00000137476	TRANSLATION	protein_coding	-	CCDS35911.1	5	557	0	7.8	1.5	394.9	0	4,-1	-	-	11.712	PRINCIPAL:3
ENSMUSG00000004207	Psap	ENSMUST00000004316	ENSMUSP00000004316	TRANSLATION	protein_coding	-	-	1	556	0	7.8	1.5	398.9	0	4,-1	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000004207	Psap	ENSMUST00000105465	ENSMUSP00000101105	TRANSLATION	protein_coding	-	CCDS48567.1	1	554	0	7.8	1.5	398.2	0	4,-1	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000004207	Psap	ENSMUST00000177779	ENSMUSP00000137286	TRANSLATION	protein_coding	-	-	5	557	0	7.825	1.5	395.5	0	4,-1	-	-	11.796	ALTERNATIVE:2
ENSMUSG00000004207	Psap	ENSMUST00000165878	ENSMUSP00000126407	TRANSLATION	protein_coding	-	CCDS48568.1	1	551	0	7.8	0.5	398.2	0	-4,-6	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000069516	Lyz2	ENSMUST00000092163	ENSMUSP00000089801	TRANSLATION	protein_coding	-	CCDS48694.1	1	148	21	3.5	10.8	190.8	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000020076	Ddx50	ENSMUST00000218224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020076	Ddx50	ENSMUST00000219076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020076	Ddx50	ENSMUST00000218304	ENSMUSP00000151469	TRANSLATION	protein_coding	start	-	3	134	0	1.4	0	26.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020076	Ddx50	ENSMUST00000217970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020076	Ddx50	ENSMUST00000218372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020076	Ddx50	ENSMUST00000218158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020076	Ddx50	ENSMUST00000220370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020076	Ddx50	ENSMUST00000020270	ENSMUSP00000020270	TRANSLATION	protein_coding	-	CCDS23892.1	1	734	14	9.44	2.7	356.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034813	Grip1	ENSMUST00000154238	ENSMUSP00000122349	TRANSLATION	protein_coding	-	-	5	712	0	9.36	0	162.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000034813	Grip1	ENSMUST00000238747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034813	Grip1	ENSMUST00000139352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034813	Grip1	ENSMUST00000105262	ENSMUSP00000100897	TRANSLATION	protein_coding	-	CCDS70113.1	1	1060	0	16.1	0.5	296.8	0	-4,-7	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000238454	ENSMUSP00000158728	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034813	Grip1	ENSMUST00000148954	ENSMUSP00000118397	TRANSLATION	protein_coding	-	-	5	1075	0	16.1	0	296.8	0	-4,-7	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000138410	ENSMUSP00000123234	TRANSLATION	protein_coding	-	CCDS24202.1	1	1127	0	16.14	0.5	296.8	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000034813	Grip1	ENSMUST00000147454	ENSMUSP00000118073	TRANSLATION	protein_coding	-	-	5	1112	0	16.14	1	296.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000041962	ENSMUSP00000042436	TRANSLATION	protein_coding	-	CCDS70112.1	1	1061	0	16.1	0.5	296.8	0	-4,-5	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000147598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034813	Grip1	ENSMUST00000144825	ENSMUSP00000121670	TRANSLATION	protein_coding	-	CCDS36072.1	1	1033	0	16.1	0.5	296.8	0	-4,-7	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000081260	ENSMUSP00000080016	TRANSLATION	nonsense_mediated_decay	-	-	1	631	0	9.36	0	162.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034813	Grip1	ENSMUST00000147356	ENSMUSP00000115478	TRANSLATION	protein_coding	-	CCDS70111.1	1	1113	0	16.14	0.5	296.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000127787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034813	Grip1	ENSMUST00000130387	ENSMUSP00000123288	TRANSLATION	protein_coding	-	-	5	697	0	9.36	0	162.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000034813	Grip1	ENSMUST00000144959	ENSMUSP00000122323	TRANSLATION	protein_coding	-	-	5	1112	0	16.14	0	296.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000077871	ENSMUSP00000077033	TRANSLATION	protein_coding	-	CCDS36071.1	1	1034	0	16.1	0.5	296.8	0	-4,-5	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000034813	Grip1	ENSMUST00000105261	ENSMUSP00000100896	TRANSLATION	protein_coding	-	CCDS70114.1	1	632	0	9.36	0.5	162.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000025409	Mbd6	ENSMUST00000156208	ENSMUSP00000114590	TRANSLATION	protein_coding	stop	-	3	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025409	Mbd6	ENSMUST00000136169	ENSMUSP00000122504	TRANSLATION	nonsense_mediated_decay	start	-	1	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025409	Mbd6	ENSMUST00000154851	ENSMUSP00000133835	TRANSLATION	protein_coding	start	-	3	128	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000025409	Mbd6	ENSMUST00000172567	ENSMUSP00000134527	TRANSLATION	protein_coding	start/stop	-	2	208	0	0	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000025409	Mbd6	ENSMUST00000119078	ENSMUSP00000112805	TRANSLATION	protein_coding	-	CCDS83762.1	1	1003	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000025409	Mbd6	ENSMUST00000026476	ENSMUSP00000026476	TRANSLATION	protein_coding	-	CCDS24235.1	5	1005	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000025409	Mbd6	ENSMUST00000126243	ENSMUSP00000115238	TRANSLATION	nonsense_mediated_decay	start	-	5	613	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036446	Lum	ENSMUST00000038160	ENSMUSP00000040877	TRANSLATION	protein_coding	-	CCDS24142.1	1	338	0	2	5.1	145.2	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000025366	Esyt1	ENSMUST00000220429	ENSMUSP00000151519	TRANSLATION	nonsense_mediated_decay	start	-	1	528	8	6.175	0	161.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025366	Esyt1	ENSMUST00000218092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025366	Esyt1	ENSMUST00000220045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025366	Esyt1	ENSMUST00000026427	ENSMUSP00000026427	TRANSLATION	protein_coding	-	CCDS24280.1	1	1092	12	16.725	0.5	579.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025366	Esyt1	ENSMUST00000217948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040127	Sdr9c7	ENSMUST00000047134	ENSMUSP00000036628	TRANSLATION	protein_coding	-	CCDS24256.1	1	313	27	2.2	6.3	135.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040127	Sdr9c7	ENSMUST00000151614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040127	Sdr9c7	ENSMUST00000155067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040127	Sdr9c7	ENSMUST00000149849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000213262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000020123	ENSMUSP00000020123	TRANSLATION	protein_coding	-	CCDS24122.1	1	693	0	4	1.5	667.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019961	Tmpo	ENSMUST00000099355	ENSMUSP00000096956	TRANSLATION	protein_coding	-	CCDS36033.1	1	380	0	3	1.5	167.3	1	-4,-5	-	-	4.002	MINOR
ENSMUSG00000019961	Tmpo	ENSMUST00000216501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019961	Tmpo	ENSMUST00000215801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000215126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000214391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019961	Tmpo	ENSMUST00000072239	ENSMUSP00000072092	TRANSLATION	protein_coding	-	CCDS36035.1	1	452	0	3	1.5	167.3	1	-4,-5	-	-	4.002	MINOR
ENSMUSG00000019961	Tmpo	ENSMUST00000105293	ENSMUSP00000100930	TRANSLATION	protein_coding	-	CCDS36032.1	1	343	0	3	1.5	167.3	1	-4,-5	-	-	4.002	MINOR
ENSMUSG00000019961	Tmpo	ENSMUST00000217449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000216402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000213270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019961	Tmpo	ENSMUST00000092219	ENSMUSP00000089864	TRANSLATION	protein_coding	-	CCDS36034.1	1	412	0	3	0.5	167.3	1	-4,-5	-	-	4.002	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000142390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054708	Ankrd24	ENSMUST00000119336	ENSMUSP00000112932	TRANSLATION	protein_coding	-	CCDS36001.1	5	985	1	5.71	0.5	86.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054708	Ankrd24	ENSMUST00000129491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054708	Ankrd24	ENSMUST00000132458	ENSMUSP00000121709	TRANSLATION	protein_coding	start	-	5	177	1	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000137978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054708	Ankrd24	ENSMUST00000140345	ENSMUSP00000123618	TRANSLATION	protein_coding	stop	-	2	133	0	1.63	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000154707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054708	Ankrd24	ENSMUST00000123896	ENSMUSP00000116603	TRANSLATION	protein_coding	stop	-	2	65	0	1.56	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000126323	ENSMUSP00000118286	TRANSLATION	protein_coding	stop	-	5	131	0	2.61	0	49.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000129622	ENSMUSP00000122451	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000123993	ENSMUSP00000117975	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0.88	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000123305	ENSMUSP00000118418	TRANSLATION	nonsense_mediated_decay	start	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000152892	ENSMUSP00000123676	TRANSLATION	protein_coding	stop	-	5	70	0	2	0	44.9	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000054708	Ankrd24	ENSMUST00000153573	ENSMUSP00000118811	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019841	Rev3l	ENSMUST00000127726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019841	Rev3l	ENSMUST00000131186	ENSMUSP00000117456	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019841	Rev3l	ENSMUST00000145333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019841	Rev3l	ENSMUST00000123103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019841	Rev3l	ENSMUST00000019986	ENSMUSP00000019986	TRANSLATION	protein_coding	-	CCDS23790.1	1	3122	8	9.46	0.5	1015.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019841	Rev3l	ENSMUST00000164763	ENSMUSP00000131519	TRANSLATION	protein_coding	-	CCDS23790.1	5	3122	8	9.46	0.5	1015.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019841	Rev3l	ENSMUST00000139803	ENSMUSP00000115630	TRANSLATION	nonsense_mediated_decay	start	-	5	807	2	5.2	0	140.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006342	Susd2	ENSMUST00000095541	ENSMUSP00000093197	TRANSLATION	protein_coding	-	CCDS23929.1	1	820	0	2.6	0.5	297.7	1	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000006342	Susd2	ENSMUST00000077610	ENSMUSP00000076802	TRANSLATION	protein_coding	-	CCDS48600.1	1	700	0	1.6	0.5	273.1	1	3,-2	-	-	8.214	MINOR
ENSMUSG00000006342	Susd2	ENSMUST00000218896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006342	Susd2	ENSMUST00000219733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020000	Moxd1	ENSMUST00000154916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020000	Moxd1	ENSMUST00000095784	ENSMUSP00000093460	TRANSLATION	protein_coding	-	CCDS23750.1	1	613	5	6.86	1.5	424	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000034792	Gna15	ENSMUST00000043709	ENSMUSP00000049175	TRANSLATION	protein_coding	-	CCDS24060.1	1	374	24	6.48	3.9	371.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000034792	Gna15	ENSMUST00000147908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034792	Gna15	ENSMUST00000150586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040354	Mars1	ENSMUST00000128369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040354	Mars1	ENSMUST00000171564	ENSMUSP00000130666	TRANSLATION	protein_coding	-	CCDS48716.1	5	910	32	16.1846	2.7	571.1	0	-4,-2	-	-	18.586	ALTERNATIVE:2
ENSMUSG00000040354	Mars1	ENSMUST00000139683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040354	Mars1	ENSMUST00000037290	ENSMUSP00000037446	TRANSLATION	protein_coding	-	CCDS24237.1	1	902	32	16.1186	3.9	571.1	0	-4,-2	-	-	18.868	PRINCIPAL:3
ENSMUSG00000040354	Mars1	ENSMUST00000134778	ENSMUSP00000118031	TRANSLATION	protein_coding	start	-	3	184	0	2.9046	0	62.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040354	Mars1	ENSMUST00000145275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033307	Mif	ENSMUST00000038169	ENSMUSP00000041149	TRANSLATION	protein_coding	-	CCDS23934.1	1	115	0	2.75	14.1	175.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033307	Mif	ENSMUST00000218267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036168	Ccdc38	ENSMUST00000132214	ENSMUSP00000150407	TRANSLATION	protein_coding	-	-	1	524	0	0	0.5	89.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000036168	Ccdc38	ENSMUST00000139354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036168	Ccdc38	ENSMUST00000092215	ENSMUSP00000089860	TRANSLATION	protein_coding	-	CCDS24127.1	1	563	0	0	0.5	89.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036168	Ccdc38	ENSMUST00000140460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036168	Ccdc38	ENSMUST00000128786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058084	Olfr825	ENSMUST00000216434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058084	Olfr825	ENSMUST00000076814	ENSMUSP00000076091	TRANSLATION	protein_coding	-	CCDS24350.1	-	320	0	0	0.5	181.2	3	-3,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058084	Olfr825	ENSMUST00000216530	ENSMUSP00000149981	TRANSLATION	protein_coding	-	CCDS24350.1	5	320	0	0	0.5	181.2	3	-3,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050035	Fhl4	ENSMUST00000059383	ENSMUSP00000050054	TRANSLATION	protein_coding	-	CCDS24086.1	1	279	36	0.6	6.3	165.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000050035	Fhl4	ENSMUST00000216889	ENSMUSP00000150570	TRANSLATION	protein_coding	-	CCDS24086.1	1	279	36	0.6	6.3	165.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020097	Sgpl1	ENSMUST00000126307	ENSMUSP00000115907	TRANSLATION	protein_coding	stop	-	2	58	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000020097	Sgpl1	ENSMUST00000155919	ENSMUSP00000115561	TRANSLATION	protein_coding	stop	-	2	199	0	4.08	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000020097	Sgpl1	ENSMUST00000152316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020097	Sgpl1	ENSMUST00000137833	ENSMUSP00000119550	TRANSLATION	protein_coding	stop	-	3	104	0	1.33	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000020097	Sgpl1	ENSMUST00000124896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020097	Sgpl1	ENSMUST00000142192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020097	Sgpl1	ENSMUST00000143225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020097	Sgpl1	ENSMUST00000122259	ENSMUSP00000112975	TRANSLATION	protein_coding	-	CCDS35914.1	1	568	12	12.41	1.5	66.2	4	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020097	Sgpl1	ENSMUST00000150258	ENSMUSP00000117848	TRANSLATION	nonsense_mediated_decay	-	-	1	487	12	10.41	0	66.2	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000020097	Sgpl1	ENSMUST00000092498	ENSMUSP00000090155	TRANSLATION	protein_coding	-	CCDS35914.1	1	568	12	12.41	1.5	66.2	4	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000019952	Poc1b	ENSMUST00000219884	ENSMUSP00000151221	TRANSLATION	nonsense_mediated_decay	-	-	1	349	0	6.68	1.2	210.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019952	Poc1b	ENSMUST00000159043	ENSMUSP00000123719	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	1.4	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019952	Poc1b	ENSMUST00000020113	ENSMUSP00000020113	TRANSLATION	protein_coding	-	CCDS36045.1	1	476	0	6.68	6.3	210.2	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000019952	Poc1b	ENSMUST00000220019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019952	Poc1b	ENSMUST00000162847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019952	Poc1b	ENSMUST00000159228	ENSMUSP00000124144	TRANSLATION	protein_coding	-	-	1	449	0	6.68	3.4	210.2	0	-4,-5	-	-	12.906	ALTERNATIVE:2
ENSMUSG00000019952	Poc1b	ENSMUST00000162704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019952	Poc1b	ENSMUST00000159990	ENSMUSP00000125423	TRANSLATION	protein_coding	-	-	1	434	0	5.75	5.8	184.5	0	-4,-7	-	-	10.41	MINOR
ENSMUSG00000035370	Gm49322	ENSMUST00000218067	ENSMUSP00000151394	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	349	4	0.2	1.5	54.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035370	Gm49322	ENSMUST00000178231	ENSMUSP00000136259	TRANSLATION	protein_coding	-	CCDS48637.1	2	349	4	0.2	1.5	54.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035370	Gm49322	ENSMUST00000219462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050251	Olfr809	ENSMUST00000059891	ENSMUSP00000054949	TRANSLATION	protein_coding	-	-	-	313	0	0.84	7.6	166.4	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050251	Olfr809	ENSMUST00000203598	ENSMUSP00000145037	TRANSLATION	protein_coding	stop	-	3	148	0	0.48	0	71.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000050251	Olfr809	ENSMUST00000218237	ENSMUSP00000151711	TRANSLATION	protein_coding	-	CCDS24336.1	-	328	0	0.84	0.5	166.4	8	-4,-6	-	-	12	MINOR
ENSMUSG00000019787	Trdn	ENSMUST00000217779	ENSMUSP00000151583	TRANSLATION	protein_coding	-	-	1	293	0	0	0	30.4	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019787	Trdn	ENSMUST00000219665	ENSMUSP00000152047	TRANSLATION	protein_coding	stop	-	1	286	0	0	0	30.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000019787	Trdn	ENSMUST00000219982	ENSMUSP00000152042	TRANSLATION	protein_coding	-	-	1	277	0	0	0	30.4	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019787	Trdn	ENSMUST00000219931	ENSMUSP00000151999	TRANSLATION	protein_coding	-	-	1	305	0	0	0	30.4	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019787	Trdn	ENSMUST00000218281	ENSMUSP00000151235	TRANSLATION	protein_coding	stop	-	5	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019787	Trdn	ENSMUST00000219211	ENSMUSP00000151565	TRANSLATION	protein_coding	start/stop	-	5	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019787	Trdn	ENSMUST00000095762	ENSMUSP00000093436	TRANSLATION	protein_coding	-	CCDS48532.1	5	693	0	0	0.5	30.4	1	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000019787	Trdn	ENSMUST00000219000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020132	Rab21	ENSMUST00000218831	ENSMUSP00000151464	TRANSLATION	protein_coding	-	-	-	94	14	1.28	0	37	0	-3,-1	-	-	0	MINOR
ENSMUSG00000020132	Rab21	ENSMUST00000020343	ENSMUSP00000020343	TRANSLATION	protein_coding	-	CCDS24177.1	1	222	25	5.36	0.5	195.4	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020070	Rufy2	ENSMUST00000143726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020070	Rufy2	ENSMUST00000062600	ENSMUSP00000059982	TRANSLATION	nonsense_mediated_decay	-	-	1	217	0	5.5	0	102.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020070	Rufy2	ENSMUST00000143594	ENSMUSP00000115339	TRANSLATION	nonsense_mediated_decay	-	-	1	437	0	5.5	4.7	102.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020070	Rufy2	ENSMUST00000156302	ENSMUSP00000116938	TRANSLATION	protein_coding	stop	-	5	59	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020070	Rufy2	ENSMUST00000148259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020070	Rufy2	ENSMUST00000119567	ENSMUSP00000113429	TRANSLATION	protein_coding	-	CCDS48582.1	1	606	8	8.21	8.3	174	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020070	Rufy2	ENSMUST00000131718	ENSMUSP00000121419	TRANSLATION	protein_coding	-	-	1	437	0	5.5	4.7	102.2	0	-4,-5	-	-	3.795	MINOR
ENSMUSG00000020070	Rufy2	ENSMUST00000122231	ENSMUSP00000113754	TRANSLATION	protein_coding	-	-	5	403	0	4.5	2.4	25	0	-4,-5	-	-	0.576	MINOR
ENSMUSG00000071185	Olfr1357	ENSMUST00000203305	ENSMUSP00000145032	TRANSLATION	protein_coding	-	CCDS23968.1	5	313	0	0.48	5.2	170.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000071185	Olfr1357	ENSMUST00000213877	ENSMUSP00000150167	TRANSLATION	protein_coding	-	CCDS23968.1	5	313	0	0.48	5.2	170.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000071185	Olfr1357	ENSMUST00000095473	ENSMUSP00000093127	TRANSLATION	protein_coding	-	CCDS23968.1	2	313	0	0.48	5.2	170.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000071185	Olfr1357	ENSMUST00000205085	ENSMUSP00000145185	TRANSLATION	protein_coding	-	CCDS23968.1	-	313	0	0.48	5.2	170.4	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000014329	Bicc1	ENSMUST00000144740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014329	Bicc1	ENSMUST00000131445	ENSMUSP00000119137	TRANSLATION	protein_coding	-	-	1	869	0	2.62	0	153.7	0	-4,-5	-	-	11.49	MINOR
ENSMUSG00000014329	Bicc1	ENSMUST00000143791	ENSMUSP00000123201	TRANSLATION	protein_coding	-	CCDS23915.1	1	977	0	2.82	5.4	155.1	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000014329	Bicc1	ENSMUST00000014473	ENSMUSP00000014473	TRANSLATION	protein_coding	-	CCDS83710.1	1	951	0	2.62	4.2	153.7	0	-4,-5	-	-	12.944	ALTERNATIVE:2
ENSMUSG00000044071	Tafa2	ENSMUST00000219723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044071	Tafa2	ENSMUST00000050756	ENSMUSP00000050199	TRANSLATION	protein_coding	-	CCDS48709.1	1	135	0	0	0.5	162.3	0	-1,-4	-	-	6	MINOR
ENSMUSG00000044071	Tafa2	ENSMUST00000218926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044071	Tafa2	ENSMUST00000238972	ENSMUSP00000159016	TRANSLATION	protein_coding	-	-	-	131	0	0	14.8	162.3	0	1,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000019900	Rfx6	ENSMUST00000219771	ENSMUSP00000151599	TRANSLATION	nonsense_mediated_decay	start	-	5	270	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019900	Rfx6	ENSMUST00000122922	ENSMUSP00000116057	TRANSLATION	protein_coding	-	CCDS48558.1	5	927	0	2.2	4.1	106.5	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000019900	Rfx6	ENSMUST00000217662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019900	Rfx6	ENSMUST00000050455	ENSMUSP00000057384	TRANSLATION	protein_coding	-	CCDS23835.1	1	663	0	0	1.5	0	0	-4,-6	-	-	0.161	MINOR
ENSMUSG00000019900	Rfx6	ENSMUST00000219364	ENSMUSP00000151430	TRANSLATION	protein_coding	-	-	1	893	0	2.2	0	106.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019945	Cabcoco1	ENSMUST00000020103	ENSMUSP00000020103	TRANSLATION	protein_coding	-	CCDS23905.1	1	308	0	0	1.5	82.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019945	Cabcoco1	ENSMUST00000166919	ENSMUSP00000128895	TRANSLATION	protein_coding	-	-	5	208	0	0	0	71.3	0	-4,-7	-	-	5.172	MINOR
ENSMUSG00000046822	Slc39a3	ENSMUST00000059551	ENSMUSP00000057094	TRANSLATION	protein_coding	-	CCDS24041.1	1	317	0	0	6.3	149.3	8	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000046822	Slc39a3	ENSMUST00000168076	ENSMUSP00000128256	TRANSLATION	protein_coding	-	CCDS24041.1	1	317	0	0	6.3	149.3	8	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000046822	Slc39a3	ENSMUST00000152177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046822	Slc39a3	ENSMUST00000154877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046822	Slc39a3	ENSMUST00000117276	ENSMUSP00000113147	TRANSLATION	protein_coding	-	CCDS24041.1	1	317	0	0	6.3	149.3	8	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000038594	Cep85l	ENSMUST00000220443	ENSMUSP00000151909	TRANSLATION	protein_coding	-	CCDS56701.1	5	806	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000038594	Cep85l	ENSMUST00000218596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038594	Cep85l	ENSMUST00000095691	ENSMUSP00000093356	TRANSLATION	protein_coding	-	-	5	704	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000038594	Cep85l	ENSMUST00000219673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038594	Cep85l	ENSMUST00000220376	ENSMUSP00000152032	TRANSLATION	protein_coding	-	-	5	704	0	0	1.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000055493	Epm2a	ENSMUST00000069106	ENSMUSP00000066050	TRANSLATION	protein_coding	-	CCDS23698.1	1	330	9	4	5.1	80.2	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000055493	Epm2a	ENSMUST00000161438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053825	Ppfia2	ENSMUST00000169303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053825	Ppfia2	ENSMUST00000217854	ENSMUSP00000151545	TRANSLATION	protein_coding	-	CCDS56746.1	1	1257	0	7.78	6.3	108.2	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000053825	Ppfia2	ENSMUST00000029404	ENSMUSP00000029404	TRANSLATION	protein_coding	-	-	1	1256	0	7.78	6.3	108.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000053825	Ppfia2	ENSMUST00000219024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056073	Grik2	ENSMUST00000220263	ENSMUSP00000151372	TRANSLATION	protein_coding	-	-	1	338	0	5.72	0	207.2	0	2,-2	-	-	0	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000218441	ENSMUSP00000151671	TRANSLATION	protein_coding	-	CCDS23830.1	1	869	15	16.1	5.3	613.5	8	2,-2	-	-	17.458	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000218823	ENSMUSP00000151921	TRANSLATION	protein_coding	-	CCDS48554.1	1	908	15	17.1	12.8	613.5	8	2,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000056073	Grik2	ENSMUST00000220330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056073	Grik2	ENSMUST00000219509	ENSMUSP00000151982	TRANSLATION	protein_coding	start	-	5	309	9	4.75	0	188.5	8	0,-4	-	-	-1	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000219051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056073	Grik2	ENSMUST00000218598	ENSMUSP00000151389	TRANSLATION	protein_coding	-	-	5	893	15	16.1	2.9	613.5	8	2,-2	-	-	16.646	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000217673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056073	Grik2	ENSMUST00000218669	ENSMUSP00000152029	TRANSLATION	protein_coding	start/stop	-	5	179	1	4.75	0	57.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000079751	ENSMUSP00000078687	TRANSLATION	protein_coding	-	CCDS23830.1	2	869	15	16.1	5.3	613.5	8	2,-2	-	-	17.458	MINOR
ENSMUSG00000056073	Grik2	ENSMUST00000105484	ENSMUSP00000101124	TRANSLATION	protein_coding	-	CCDS48554.1	1	908	15	17.1	12.8	613.5	8	2,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000057337	Chst3	ENSMUST00000167915	ENSMUSP00000131532	TRANSLATION	protein_coding	-	-	1	472	0	0	1	187	1	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000057337	Chst3	ENSMUST00000135158	ENSMUSP00000126281	TRANSLATION	protein_coding	-	CCDS23871.2	5	478	0	0	1.5	187	1	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000057337	Chst3	ENSMUST00000068690	ENSMUSP00000065010	TRANSLATION	protein_coding	-	-	1	472	0	0	1	187	1	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000055531	Cpsf6	ENSMUST00000176480	ENSMUSP00000135550	TRANSLATION	nonsense_mediated_decay	start	-	3	182	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055531	Cpsf6	ENSMUST00000175888	ENSMUSP00000135840	TRANSLATION	protein_coding	start	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055531	Cpsf6	ENSMUST00000176686	ENSMUSP00000134823	TRANSLATION	protein_coding	-	CCDS78898.1	1	552	0	4.75	9.6	28.2	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000055531	Cpsf6	ENSMUST00000069168	ENSMUSP00000068408	TRANSLATION	protein_coding	-	CCDS24193.1	1	551	0	4.75	9.6	28.2	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000055531	Cpsf6	ENSMUST00000177145	ENSMUSP00000135136	TRANSLATION	protein_coding	-	CCDS24193.1	1	551	0	4.75	9.6	28.2	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000055531	Cpsf6	ENSMUST00000176567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055531	Cpsf6	ENSMUST00000175924	ENSMUSP00000135848	TRANSLATION	protein_coding	stop	-	5	91	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055531	Cpsf6	ENSMUST00000176670	ENSMUSP00000135150	TRANSLATION	protein_coding	-	-	5	588	0	4.75	7.6	28.2	0	-4,-5	-	-	14.301	ALTERNATIVE:1
ENSMUSG00000090841	Myl6	ENSMUST00000217776	ENSMUSP00000151786	TRANSLATION	protein_coding	-	-	3	158	12	3.68	0.5	27	0	-4,-5	-	-	16.206	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000164181	ENSMUSP00000128803	TRANSLATION	protein_coding	-	CCDS48728.1	1	151	14	3.91	16.2	27	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000090841	Myl6	ENSMUST00000217733	ENSMUSP00000151236	TRANSLATION	protein_coding	-	-	1	152	12	3.58	1	27	0	-4,-5	-	-	16.008	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000219655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090841	Myl6	ENSMUST00000217913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090841	Myl6	ENSMUST00000220307	ENSMUSP00000151991	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000218713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090841	Myl6	ENSMUST00000218170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090841	Myl6	ENSMUST00000220427	ENSMUSP00000151914	TRANSLATION	nonsense_mediated_decay	-	-	3	38	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000218813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090841	Myl6	ENSMUST00000219100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090841	Myl6	ENSMUST00000219236	ENSMUSP00000151915	TRANSLATION	protein_coding	-	-	2	158	12	3.68	0.5	27	0	-4,-5	-	-	16.206	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000217969	ENSMUSP00000151250	TRANSLATION	protein_coding	-	-	2	139	11	3.41	0	0	0	-4,-5	-	-	9	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000218127	ENSMUSP00000151693	TRANSLATION	protein_coding	-	-	2	151	12	3.91	16.2	27	0	-4,-5	-	-	20.668	MINOR
ENSMUSG00000090841	Myl6	ENSMUST00000219554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092360	Gm20441	ENSMUST00000173512	ENSMUSP00000134112	TRANSLATION	protein_coding,RT	start/stop	-	5	252	13	5.25	0	151.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025407	Gli1	ENSMUST00000219808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025407	Gli1	ENSMUST00000026474	ENSMUSP00000026474	TRANSLATION	protein_coding	-	CCDS24238.1	1	1111	21	3.8	0.5	59.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025407	Gli1	ENSMUST00000218236	ENSMUSP00000151718	TRANSLATION	protein_coding	stop	-	1	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025407	Gli1	ENSMUST00000218451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025407	Gli1	ENSMUST00000219671	ENSMUSP00000151749	TRANSLATION	protein_coding	stop	-	1	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034613	Ppm1h	ENSMUST00000067918	ENSMUSP00000066561	TRANSLATION	protein_coding	-	CCDS48705.1	1	513	10	3.54	7.5	89.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000034613	Ppm1h	ENSMUST00000161065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034613	Ppm1h	ENSMUST00000161371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034613	Ppm1h	ENSMUST00000162853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034613	Ppm1h	ENSMUST00000160315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034613	Ppm1h	ENSMUST00000159885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034613	Ppm1h	ENSMUST00000161487	ENSMUSP00000124982	TRANSLATION	protein_coding	-	CCDS48706.1	1	469	8	3.14	0.5	88.3	0	-4,-7	-	-	15.804	MINOR
ENSMUSG00000034613	Ppm1h	ENSMUST00000162969	ENSMUSP00000124006	TRANSLATION	protein_coding	-	-	3	132	4	1.84	0	43.9	0	-4,-5	-	-	7.548	MINOR
ENSMUSG00000019909	Fam162b	ENSMUST00000020064	ENSMUSP00000020064	TRANSLATION	protein_coding	-	CCDS48557.1	1	157	0	0	0.5	178.3	0	-3,0	-	-	6	PRINCIPAL:1
ENSMUSG00000045518	Onecut3	ENSMUST00000051773	ENSMUSP00000053288	TRANSLATION	protein_coding	-	CCDS24023.1	1	490	0	1.4	0.5	145.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000019891	Dcbld1	ENSMUST00000218278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019891	Dcbld1	ENSMUST00000069004	ENSMUSP00000068203	TRANSLATION	protein_coding	-	CCDS23839.1	1	503	0	3.525	1.5	115.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000019891	Dcbld1	ENSMUST00000218582	ENSMUSP00000151265	TRANSLATION	protein_coding	-	CCDS83696.1	1	432	0	2.925	0.5	50.6	0	3,-1	-	-	6.93	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019978	Epb41l2	ENSMUST00000219967	ENSMUSP00000151632	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000217929	ENSMUSP00000151875	TRANSLATION	protein_coding	-	-	1	794	0	6.4	0.5	430.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000218903	ENSMUSP00000151685	TRANSLATION	protein_coding	-	-	1	918	0	6.4	0.5	455.5	0	-4,-5	-	-	7.41	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219224	ENSMUSP00000151926	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000217943	ENSMUSP00000152003	TRANSLATION	protein_coding	start/stop	-	1	204	0	0	0	43.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019978	Epb41l2	ENSMUST00000219372	ENSMUSP00000151258	TRANSLATION	protein_coding	start	-	2	131	0	0	0	149.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000092645	ENSMUSP00000090314	TRANSLATION	protein_coding	-	CCDS23754.1	5	988	0	6.4	0.5	532	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019978	Epb41l2	ENSMUST00000220121	ENSMUSP00000158664	TRANSLATION	protein_coding	start	-	1	806	0	6.4	0	288.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000220290	ENSMUSP00000151707	TRANSLATION	protein_coding	-	-	5	201	0	0	0	178.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219166	ENSMUSP00000151702	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219900	ENSMUSP00000151332	TRANSLATION	protein_coding	stop	-	1	513	0	6.4	0	222	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000219941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019978	Epb41l2	ENSMUST00000217844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019978	Epb41l2	ENSMUST00000219805	ENSMUSP00000151233	TRANSLATION	protein_coding	stop	-	1	513	0	6.4	0	222	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019978	Epb41l2	ENSMUST00000220335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019978	Epb41l2	ENSMUST00000218345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019978	Epb41l2	ENSMUST00000219201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019978	Epb41l2	ENSMUST00000053748	ENSMUSP00000055122	TRANSLATION	protein_coding	-	CCDS23754.1	1	988	0	6.4	0.5	532	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003341	Atp8b3	ENSMUST00000219648	ENSMUSP00000151589	TRANSLATION	protein_coding	-	-	1	137	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000003341	Atp8b3	ENSMUST00000220326	ENSMUSP00000151571	TRANSLATION	nonsense_mediated_decay	-	-	1	857	2	3.348	0	163.8	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000003341	Atp8b3	ENSMUST00000020383	ENSMUSP00000020383	TRANSLATION	protein_coding	-	CCDS24024.1	1	1335	3	3.348	0.5	403	10	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000219698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000219790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000218821	ENSMUSP00000152035	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000218328	ENSMUSP00000151658	TRANSLATION	protein_coding	start/stop	-	5	225	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000219410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000218929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000219995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046567	4930430F08Rik	ENSMUST00000054471	ENSMUSP00000062410	TRANSLATION	protein_coding	-	CCDS24151.1	1	327	0	0	10.8	0	0	-4,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000060301	2610008E11Rik	ENSMUST00000220220	ENSMUSP00000151822	TRANSLATION	protein_coding	-	-	2	154	0	1	0	78.4	0	-4,-6	-	-	3.66	MINOR
ENSMUSG00000060301	2610008E11Rik	ENSMUST00000218854	ENSMUSP00000151709	TRANSLATION	protein_coding	stop	-	3	194	2	1.64	0	78.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060301	2610008E11Rik	ENSMUST00000039271	ENSMUSP00000044020	TRANSLATION	protein_coding	-	CCDS35965.1	1	669	61	1.6	1.5	288.8	0	-4,-6	-	-	17.856	PRINCIPAL:1
ENSMUSG00000060301	2610008E11Rik	ENSMUST00000219729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020089	Ppa1	ENSMUST00000160607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020089	Ppa1	ENSMUST00000162028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020089	Ppa1	ENSMUST00000160470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020089	Ppa1	ENSMUST00000020286	ENSMUSP00000020286	TRANSLATION	protein_coding	-	CCDS23882.1	1	289	10	6.6	11.5	203.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000019803	Nr2e1	ENSMUST00000143891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019803	Nr2e1	ENSMUST00000105498	ENSMUSP00000101137	TRANSLATION	protein_coding	-	-	1	173	0	4	0	82.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000019803	Nr2e1	ENSMUST00000126848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019803	Nr2e1	ENSMUST00000019938	ENSMUSP00000019938	TRANSLATION	protein_coding	-	CCDS23813.1	1	385	8	7.258	15	219.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020131	Pcsk4	ENSMUST00000135071	ENSMUSP00000137719	TRANSLATION	nonsense_mediated_decay	start	-	5	187	7	3.416	0	106.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020131	Pcsk4	ENSMUST00000147132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020131	Pcsk4	ENSMUST00000020340	ENSMUSP00000020340	TRANSLATION	protein_coding	-	CCDS24018.1	1	655	16	13.16	0.5	313.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020131	Pcsk4	ENSMUST00000137177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020131	Pcsk4	ENSMUST00000128653	ENSMUSP00000137809	TRANSLATION	nonsense_mediated_decay	-	-	5	258	12	4.35	0	135.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000020131	Pcsk4	ENSMUST00000130521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001783	Rtcb	ENSMUST00000139413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001783	Rtcb	ENSMUST00000001834	ENSMUSP00000001834	TRANSLATION	protein_coding	-	CCDS24094.1	1	505	23	9.685	19.5	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020086	Macroh2a2	ENSMUST00000020283	ENSMUSP00000020283	TRANSLATION	protein_coding	-	CCDS23885.1	1	372	0	7.8	11.5	202.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020166	Cnot2	ENSMUST00000218744	ENSMUSP00000151501	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000219544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020166	Cnot2	ENSMUST00000105267	ENSMUSP00000100902	TRANSLATION	protein_coding	-	CCDS36064.1	1	540	0	5	8.8	106.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020166	Cnot2	ENSMUST00000169921	ENSMUSP00000132152	TRANSLATION	protein_coding	-	CCDS36064.1	1	540	0	5	8.8	106.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020166	Cnot2	ENSMUST00000167644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000105265	ENSMUSP00000100900	TRANSLATION	protein_coding	-	-	1	455	0	5	5.2	106.6	0	-4,-2	-	-	13.614	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000171944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000169937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000165527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000164383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000167706	ENSMUSP00000128837	TRANSLATION	protein_coding	-	-	5	490	0	5	0	106.6	0	-4,-6	-	-	12	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000164088	ENSMUSP00000127830	TRANSLATION	protein_coding	-	CCDS24185.2	1	499	0	5	4	106.6	0	-4,-5	-	-	13.155	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000020374	ENSMUSP00000020374	TRANSLATION	protein_coding	-	CCDS36065.1	1	109	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000168036	ENSMUSP00000132315	TRANSLATION	protein_coding	-	CCDS24185.2	5	499	0	5	4	106.6	0	-4,-5	-	-	13.155	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000218490	ENSMUSP00000151847	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000169576	ENSMUSP00000130192	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000169507	ENSMUSP00000128720	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020166	Cnot2	ENSMUST00000171214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020166	Cnot2	ENSMUST00000166166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034818	Celf5	ENSMUST00000118763	ENSMUSP00000113675	TRANSLATION	protein_coding	-	CCDS48644.1	1	395	0	4.95	1.5	110.6	0	-4,-5	-	-	3.372	MINOR
ENSMUSG00000034818	Celf5	ENSMUST00000128494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034818	Celf5	ENSMUST00000119060	ENSMUSP00000113546	TRANSLATION	protein_coding	-	CCDS78867.1	1	319	0	3.2	1.8	60.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000034818	Celf5	ENSMUST00000141207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034818	Celf5	ENSMUST00000147524	ENSMUSP00000117430	TRANSLATION	protein_coding	stop	-	3	92	0	2.25	0	60.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034818	Celf5	ENSMUST00000120856	ENSMUSP00000113784	TRANSLATION	protein_coding	-	CCDS78868.1	1	318	0	3.2	1.8	60.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034818	Celf5	ENSMUST00000238823	ENSMUSP00000158971	TRANSLATION	protein_coding	-	-	-	446	0	7.45	1.5	171.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034818	Celf5	ENSMUST00000145375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034818	Celf5	ENSMUST00000120508	ENSMUSP00000113592	TRANSLATION	protein_coding	-	CCDS78869.1	1	394	0	4.95	1.5	110.6	0	-4,-5	-	-	3.372	MINOR
ENSMUSG00000020224	Llph	ENSMUST00000130198	ENSMUSP00000118254	TRANSLATION	protein_coding	-	CCDS24206.1	3	130	0	0	0.5	151.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020224	Llph	ENSMUST00000220107	ENSMUSP00000151942	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	0	0	82.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020224	Llph	ENSMUST00000020444	ENSMUSP00000020444	TRANSLATION	protein_coding	-	CCDS24206.1	1	130	0	0	0.5	151.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000001666	Ddt	ENSMUST00000172820	ENSMUSP00000134561	TRANSLATION	protein_coding	-	-	2	73	0	1.75	0	101.3	0	-4,-7	-	-	5.034	MINOR
ENSMUSG00000001666	Ddt	ENSMUST00000001716	ENSMUSP00000001716	TRANSLATION	protein_coding	-	CCDS23930.1	1	118	0	3.08	1.5	173.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059763	Taar2	ENSMUST00000079134	ENSMUSP00000078137	TRANSLATION	protein_coding	-	CCDS35869.1	1	339	0	0.666	1.5	177.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035621	Midn	ENSMUST00000099492	ENSMUSP00000097091	TRANSLATION	protein_coding	-	CCDS83727.1	5	465	0	1.28	0.5	25.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000035621	Midn	ENSMUST00000042057	ENSMUSP00000046967	TRANSLATION	protein_coding	-	CCDS24011.1	1	508	0	1.28	0.5	25.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000035621	Midn	ENSMUST00000124179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035621	Midn	ENSMUST00000144526	ENSMUSP00000120988	TRANSLATION	protein_coding	stop	-	2	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035621	Midn	ENSMUST00000153477	ENSMUSP00000119787	TRANSLATION	protein_coding	stop	-	5	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035621	Midn	ENSMUST00000146516	ENSMUSP00000119962	TRANSLATION	protein_coding	stop	-	2	175	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035621	Midn	ENSMUST00000151202	ENSMUSP00000115717	TRANSLATION	protein_coding	stop	-	3	67	0	0.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048185	Gm7075	ENSMUST00000054760	ENSMUSP00000097258	TRANSLATION	protein_coding	-	-	-	112	12	1	4.5	71.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000034902	Pip5k1c	ENSMUST00000161854	ENSMUSP00000124004	TRANSLATION	nonsense_mediated_decay	-	-	1	100	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034902	Pip5k1c	ENSMUST00000159895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034902	Pip5k1c	ENSMUST00000105327	ENSMUSP00000100964	TRANSLATION	protein_coding	-	CCDS35994.1	1	661	2	7.55	0.5	312.7	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000034902	Pip5k1c	ENSMUST00000159636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034902	Pip5k1c	ENSMUST00000163075	ENSMUSP00000124155	TRANSLATION	protein_coding	-	CCDS48643.1	1	635	2	7.55	1.7	312.7	0	-4,-5	-	-	14	ALTERNATIVE:2
ENSMUSG00000034902	Pip5k1c	ENSMUST00000161719	ENSMUSP00000125461	TRANSLATION	protein_coding	start/stop	-	2	216	1	2.6	0	107.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034902	Pip5k1c	ENSMUST00000161869	ENSMUSP00000124235	TRANSLATION	nonsense_mediated_decay	start	-	3	73	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034902	Pip5k1c	ENSMUST00000160291	ENSMUSP00000125645	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034902	Pip5k1c	ENSMUST00000161586	ENSMUSP00000124612	TRANSLATION	nonsense_mediated_decay	start	-	5	133	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034902	Pip5k1c	ENSMUST00000045469	ENSMUSP00000038225	TRANSLATION	protein_coding	-	CCDS78865.1	1	687	2	7.55	0.5	312.7	0	-4,-5	-	-	14	ALTERNATIVE:2
ENSMUSG00000048015	Neurod4	ENSMUST00000061571	ENSMUSP00000051379	TRANSLATION	protein_coding	-	CCDS24353.1	1	330	0	0.4	7.5	189.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049894	Olfr808	ENSMUST00000203236	ENSMUSP00000145315	TRANSLATION	protein_coding	-	CCDS24335.1	2	312	0	0.42	6.4	180.2	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049894	Olfr808	ENSMUST00000060636	ENSMUSP00000059714	TRANSLATION	protein_coding	-	CCDS24335.1	-	312	0	0.42	6.4	180.2	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020232	Hmg20b	ENSMUST00000140268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020232	Hmg20b	ENSMUST00000140160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020232	Hmg20b	ENSMUST00000105323	ENSMUSP00000100960	TRANSLATION	protein_coding	-	CCDS24055.1	1	317	0	2.5	5.1	68	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020232	Hmg20b	ENSMUST00000020454	ENSMUSP00000020454	TRANSLATION	protein_coding	-	CCDS24055.1	1	317	0	2.5	5.1	68	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020232	Hmg20b	ENSMUST00000129482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020232	Hmg20b	ENSMUST00000167481	ENSMUSP00000128807	TRANSLATION	protein_coding	-	CCDS24055.1	5	317	0	2.5	5.1	68	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020232	Hmg20b	ENSMUST00000154609	ENSMUSP00000115459	TRANSLATION	protein_coding	stop	-	3	235	0	2.5	0	68	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020232	Hmg20b	ENSMUST00000105324	ENSMUSP00000100961	TRANSLATION	protein_coding	-	CCDS24055.1	1	317	0	2.5	5.1	68	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020232	Hmg20b	ENSMUST00000141171	ENSMUSP00000117322	TRANSLATION	protein_coding	start/stop	-	2	246	0	2.5	0	68	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020232	Hmg20b	ENSMUST00000134857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020232	Hmg20b	ENSMUST00000132313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020232	Hmg20b	ENSMUST00000148839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020232	Hmg20b	ENSMUST00000122993	ENSMUSP00000137861	TRANSLATION	protein_coding	-	-	1	215	0	1.5	1.2	26.4	0	-4,-5	-	-	6.026	MINOR
ENSMUSG00000019817	Plagl1	ENSMUST00000135095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000126880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000143582	ENSMUSP00000115595	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019817	Plagl1	ENSMUST00000121325	ENSMUSP00000112889	TRANSLATION	protein_coding	-	-	1	678	28	2.3	0	68.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000019817	Plagl1	ENSMUST00000149881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000135826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000145103	ENSMUSP00000120581	TRANSLATION	protein_coding	stop	-	2	17	2	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019817	Plagl1	ENSMUST00000141944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019817	Plagl1	ENSMUST00000193426	ENSMUSP00000141514	TRANSLATION	protein_coding	stop	-	1	121	16	2.3	0	68.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019817	Plagl1	ENSMUST00000123135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000141068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000124252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000130638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019817	Plagl1	ENSMUST00000130800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019817	Plagl1	ENSMUST00000130894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000135261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000129989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019817	Plagl1	ENSMUST00000138433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000130449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000139262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000150773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000144437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019817	Plagl1	ENSMUST00000121646	ENSMUSP00000112847	TRANSLATION	protein_coding	-	CCDS48501.1	1	704	28	2.3	0.5	68.7	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000019817	Plagl1	ENSMUST00000130313	ENSMUSP00000117321	TRANSLATION	protein_coding	stop	-	3	117	16	2.3	0	68.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019817	Plagl1	ENSMUST00000121766	ENSMUSP00000113710	TRANSLATION	protein_coding	-	-	1	678	28	2.3	0	68.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000006724	Cyp27b1	ENSMUST00000172069	ENSMUSP00000127367	TRANSLATION	nonsense_mediated_decay	-	-	1	135	0	0.48	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000006724	Cyp27b1	ENSMUST00000165764	ENSMUSP00000130005	TRANSLATION	protein_coding	-	CCDS24224.2	1	507	28	6.83	0.5	320.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000006724	Cyp27b1	ENSMUST00000171868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063715	Olfr816	ENSMUST00000071605	ENSMUSP00000071534	TRANSLATION	protein_coding	-	CCDS24343.1	-	312	0	0.36	6.4	168.4	5	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000063715	Olfr816	ENSMUST00000213618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063715	Olfr816	ENSMUST00000213438	ENSMUSP00000149515	TRANSLATION	protein_coding	-	CCDS24343.1	5	312	0	0.36	6.4	168.4	5	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025373	Rnf41	ENSMUST00000218371	ENSMUSP00000151889	TRANSLATION	nonsense_mediated_decay	-	-	1	122	3	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025373	Rnf41	ENSMUST00000171342	ENSMUSP00000132751	TRANSLATION	protein_coding	-	CCDS24277.1	1	317	13	3	16.2	329.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025373	Rnf41	ENSMUST00000217826	ENSMUSP00000151260	TRANSLATION	nonsense_mediated_decay	-	-	1	36	2	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025373	Rnf41	ENSMUST00000096386	ENSMUSP00000100869	TRANSLATION	protein_coding	-	CCDS24277.1	1	317	13	3	16.2	329.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000012819	Cdh23	ENSMUST00000127312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012819	Cdh23	ENSMUST00000105461	ENSMUSP00000101101	TRANSLATION	protein_coding	-	-	5	3354	264	35.72	1.7	1407.2	0	4,-1	-	-	17.886	ALTERNATIVE:2
ENSMUSG00000012819	Cdh23	ENSMUST00000123309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000153525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000156501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012819	Cdh23	ENSMUST00000073242	ENSMUSP00000072973	TRANSLATION	protein_coding	-	-	5	3353	264	35.72	1.7	1376.1	0	4,-1	-	-	16.02	MINOR
ENSMUSG00000012819	Cdh23	ENSMUST00000151194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000153677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000135638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012819	Cdh23	ENSMUST00000144462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000128249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012819	Cdh23	ENSMUST00000153149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012819	Cdh23	ENSMUST00000105462	ENSMUSP00000101102	TRANSLATION	protein_coding	-	-	5	3321	264	35.72	1.7	1369.6	0	4,-1	-	-	15.63	MINOR
ENSMUSG00000012819	Cdh23	ENSMUST00000105463	ENSMUSP00000101103	TRANSLATION	protein_coding	-	-	5	3319	264	35.72	2.7	1407.2	0	4,-1	-	-	17.886	ALTERNATIVE:2
ENSMUSG00000012819	Cdh23	ENSMUST00000105464	ENSMUSP00000101104	TRANSLATION	protein_coding	-	CCDS56704.1	5	3352	263	35.72	1.7	1409.1	0	4,-1	-	-	17.334	PRINCIPAL:2
ENSMUSG00000012819	Cdh23	ENSMUST00000124712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096229	Olfr774	ENSMUST00000097164	ENSMUSP00000131609	TRANSLATION	protein_coding	-	CCDS48732.1	-	312	0	0.28	7.5	165.4	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096229	Olfr774	ENSMUST00000203248	ENSMUSP00000145042	TRANSLATION	protein_coding	-	CCDS48732.1	3	312	0	0.28	7.5	165.4	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034612	Chst11	ENSMUST00000040110	ENSMUSP00000045349	TRANSLATION	protein_coding	-	CCDS24074.1	1	352	0	0	15.5	229.9	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000020216	Jsrp1	ENSMUST00000181039	ENSMUSP00000137666	TRANSLATION	protein_coding	-	CCDS24034.2	1	332	0	0	0.5	90.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000020216	Jsrp1	ENSMUST00000181945	ENSMUSP00000137960	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020216	Jsrp1	ENSMUST00000020435	ENSMUSP00000020435	TRANSLATION	protein_coding	-	-	2	292	0	0	0	90.6	0	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020216	Jsrp1	ENSMUST00000180438	ENSMUSP00000137701	TRANSLATION	protein_coding	stop	-	5	78	0	0	0	56.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000112495	Gm9048	ENSMUST00000177744	ENSMUSP00000151669	TRANSLATION	protein_coding	-	-	-	802	0	1	15	345.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035620	Ric8b	ENSMUST00000095385	ENSMUSP00000093032	TRANSLATION	protein_coding	-	CCDS24084.1	1	520	0	0	7.5	341.2	0	-4,-5	-	-	4.08	MINOR
ENSMUSG00000035620	Ric8b	ENSMUST00000214693	ENSMUSP00000148897	TRANSLATION	protein_coding	stop	-	5	248	0	0	0	180.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035620	Ric8b	ENSMUST00000217175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035620	Ric8b	ENSMUST00000038523	ENSMUSP00000046981	TRANSLATION	protein_coding	-	CCDS24085.1	1	560	0	0	7.5	423.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035620	Ric8b	ENSMUST00000214820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019935	Slc17a8	ENSMUST00000020102	ENSMUSP00000020102	TRANSLATION	protein_coding	-	CCDS24117.1	1	601	0	0	0.5	155.2	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019935	Slc17a8	ENSMUST00000105295	ENSMUSP00000100932	TRANSLATION	protein_coding	-	CCDS78880.1	1	417	0	0	0.5	115.8	8	-4,-2	-	-	3.636	MINOR
ENSMUSG00000055862	Izumo4	ENSMUST00000219746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000218330	ENSMUSP00000151884	TRANSLATION	nonsense_mediated_decay	start	-	3	115	4	0	0	64.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055862	Izumo4	ENSMUST00000217742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000218184	ENSMUSP00000151397	TRANSLATION	protein_coding	-	CCDS35983.1	2	227	4	0	1.5	100.8	0	3,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000055862	Izumo4	ENSMUST00000219422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000219152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000219986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000217823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000218058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000095426	ENSMUSP00000093076	TRANSLATION	protein_coding	start	-	5	209	4	0	0.5	100.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000055862	Izumo4	ENSMUST00000219987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000218538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055862	Izumo4	ENSMUST00000219420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020044	Timp3	ENSMUST00000132307	ENSMUSP00000133236	TRANSLATION	protein_coding	stop	-	3	50	0	1.316	0	25.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020044	Timp3	ENSMUST00000020234	ENSMUSP00000020234	TRANSLATION	protein_coding	-	CCDS24097.1	1	211	0	5	10.8	221.4	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020044	Timp3	ENSMUST00000136045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020044	Timp3	ENSMUST00000151134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009681	Bcr	ENSMUST00000219807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009681	Bcr	ENSMUST00000218591	ENSMUSP00000151282	TRANSLATION	protein_coding	start	-	5	120	0	0	0	31	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009681	Bcr	ENSMUST00000218057	ENSMUSP00000151277	TRANSLATION	protein_coding	stop	-	5	182	0	2.45	0	105.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009681	Bcr	ENSMUST00000218465	ENSMUSP00000158833	TRANSLATION	protein_coding	-	-	1	311	0	3.73	0	167.1	0	-4,-1	-	-	0	MINOR
ENSMUSG00000009681	Bcr	ENSMUST00000164107	ENSMUSP00000126377	TRANSLATION	protein_coding	-	CCDS35935.1	1	1270	0	8.33	1.5	447.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019988	Nedd1	ENSMUST00000215970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019988	Nedd1	ENSMUST00000020163	ENSMUSP00000020163	TRANSLATION	protein_coding	-	CCDS24123.1	1	660	0	3.72	3.9	38.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000019988	Nedd1	ENSMUST00000216086	ENSMUSP00000150817	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019988	Nedd1	ENSMUST00000214417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044312	Neurog3	ENSMUST00000218216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044312	Neurog3	ENSMUST00000050103	ENSMUSP00000054054	TRANSLATION	protein_coding	-	CCDS23887.1	1	214	0	1.2	2.7	57.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044312	Neurog3	ENSMUST00000218121	ENSMUSP00000151551	TRANSLATION	protein_coding	stop	-	5	50	0	1	0	39	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000100689	Taar7e	ENSMUST00000092656	ENSMUSP00000090326	TRANSLATION	protein_coding	-	CCDS23743.1	-	358	0	0.6	1.5	192	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019837	Gtf3c6	ENSMUST00000217457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019837	Gtf3c6	ENSMUST00000217537	ENSMUSP00000151091	TRANSLATION	protein_coding	-	CCDS23794.1	1	227	0	0	0.5	55.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000019837	Gtf3c6	ENSMUST00000019982	ENSMUSP00000019982	TRANSLATION	protein_coding	-	-	1	228	0	0	0.5	55.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019837	Gtf3c6	ENSMUST00000213628	ENSMUSP00000150763	TRANSLATION	protein_coding	stop	-	3	127	0	0	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019837	Gtf3c6	ENSMUST00000217141	ENSMUSP00000148989	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019837	Gtf3c6	ENSMUST00000216847	ENSMUSP00000150276	TRANSLATION	protein_coding	stop	-	3	101	0	0	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036875	Dna2	ENSMUST00000131715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036875	Dna2	ENSMUST00000137378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036875	Dna2	ENSMUST00000129785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036875	Dna2	ENSMUST00000131422	ENSMUSP00000115750	TRANSLATION	protein_coding	-	CCDS35923.1	1	1062	16	21.25	0.5	507.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036875	Dna2	ENSMUST00000139212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036875	Dna2	ENSMUST00000092462	ENSMUSP00000090119	TRANSLATION	nonsense_mediated_decay	-	-	1	966	13	17.75	0.5	387.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025354	Dnajc14	ENSMUST00000219473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025354	Dnajc14	ENSMUST00000218511	ENSMUSP00000151567	TRANSLATION	protein_coding	stop	-	2	184	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025354	Dnajc14	ENSMUST00000218765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025354	Dnajc14	ENSMUST00000219508	ENSMUSP00000151343	TRANSLATION	protein_coding	-	CCDS24294.1	1	703	3	1.36	3.9	195.3	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000025354	Dnajc14	ENSMUST00000217745	ENSMUSP00000151530	TRANSLATION	protein_coding	-	CCDS24294.1	1	703	3	1.36	3.9	195.3	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000025354	Dnajc14	ENSMUST00000026410	ENSMUSP00000026410	TRANSLATION	protein_coding	-	CCDS24294.1	1	703	3	1.36	3.9	195.3	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000025354	Dnajc14	ENSMUST00000218001	ENSMUSP00000151348	TRANSLATION	protein_coding	stop	-	2	136	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000015519	2310057J18Rik	ENSMUST00000140558	ENSMUSP00000121044	TRANSLATION	protein_coding	-	-	5	229	0	3.41	0	171.8	0	-4,-6	-	-	3.774	MINOR
ENSMUSG00000015519	2310057J18Rik	ENSMUST00000015663	ENSMUSP00000015663	TRANSLATION	protein_coding	-	CCDS23759.1	1	337	0	4.54	0.5	271.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015519	2310057J18Rik	ENSMUST00000141350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015519	2310057J18Rik	ENSMUST00000152363	ENSMUSP00000118049	TRANSLATION	protein_coding	-	-	1	246	0	2.95	0	202.4	0	3,-2	-	-	4.692	MINOR
ENSMUSG00000061759	Armt1	ENSMUST00000131636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061759	Armt1	ENSMUST00000143037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061759	Armt1	ENSMUST00000134484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061759	Armt1	ENSMUST00000117489	ENSMUSP00000114025	TRANSLATION	protein_coding	-	-	1	136	4	1.42	0	78.1	0	-4,-5	-	-	4.338	MINOR
ENSMUSG00000061759	Armt1	ENSMUST00000118544	ENSMUSP00000114073	TRANSLATION	protein_coding	-	-	1	208	4	2.14	0	107.9	0	-4,-5	-	-	6.198	MINOR
ENSMUSG00000061759	Armt1	ENSMUST00000095893	ENSMUSP00000093581	TRANSLATION	protein_coding	-	CCDS56676.1	1	439	12	2.32	1.5	416.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061759	Armt1	ENSMUST00000152294	ENSMUSP00000115624	TRANSLATION	nonsense_mediated_decay	-	-	2	53	2	0.94	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047648	Fbxo30	ENSMUST00000070300	ENSMUSP00000068230	TRANSLATION	protein_coding	-	CCDS23697.1	1	746	16	0.2	1.5	296.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047648	Fbxo30	ENSMUST00000129456	ENSMUSP00000117687	TRANSLATION	protein_coding	-	CCDS23697.1	1	746	16	0.2	1.5	296.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000009115	Spatc1l	ENSMUST00000009259	ENSMUSP00000009259	TRANSLATION	protein_coding	-	CCDS23949.1	1	342	0	0	5.1	366.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000009115	Spatc1l	ENSMUST00000105414	ENSMUSP00000101054	TRANSLATION	protein_coding	-	-	1	195	0	0	0	159.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000015889	Lta4h	ENSMUST00000016033	ENSMUSP00000016033	TRANSLATION	protein_coding	-	CCDS24125.1	1	611	17	16.08	7.5	291.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015889	Lta4h	ENSMUST00000215224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015889	Lta4h	ENSMUST00000216146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015889	Lta4h	ENSMUST00000217556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015889	Lta4h	ENSMUST00000216174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015889	Lta4h	ENSMUST00000215419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015889	Lta4h	ENSMUST00000216931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015889	Lta4h	ENSMUST00000214527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112856	Gm4305	ENSMUST00000219159	ENSMUSP00000151398	TRANSLATION	protein_coding	-	CCDS48682.1	-	289	0	1	0.5	70.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043670	Diras1	ENSMUST00000144640	ENSMUSP00000120173	TRANSLATION	protein_coding	stop	-	2	108	14	1	0	95.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043670	Diras1	ENSMUST00000055125	ENSMUSP00000055605	TRANSLATION	protein_coding	-	CCDS24040.1	1	198	21	2	19.5	163.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000019767	Ccdc170	ENSMUST00000019901	ENSMUSP00000019901	TRANSLATION	protein_coding	-	CCDS56677.1	5	716	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000019767	Ccdc170	ENSMUST00000157064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019767	Ccdc170	ENSMUST00000138112	ENSMUSP00000115997	TRANSLATION	protein_coding	-	-	5	722	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000019767	Ccdc170	ENSMUST00000145465	ENSMUSP00000122673	TRANSLATION	protein_coding	stop	-	5	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036816	Atoh7	ENSMUST00000219964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036816	Atoh7	ENSMUST00000044059	ENSMUSP00000039801	TRANSLATION	protein_coding	-	CCDS23896.1	-	149	0	0.6	1.5	63.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034872	Gipc3	ENSMUST00000045102	ENSMUSP00000049236	TRANSLATION	protein_coding	-	CCDS24054.1	1	297	0	1.8	1.5	30.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095721	Gm7137	ENSMUST00000180161	ENSMUSP00000136480	TRANSLATION	protein_coding	-	-	-	236	0	0	0.5	39.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000219907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001211	Agpat3	ENSMUST00000146899	ENSMUSP00000114657	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000001211	Agpat3	ENSMUST00000105387	ENSMUSP00000101026	TRANSLATION	protein_coding	-	CCDS23963.1	1	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000105390	ENSMUSP00000101029	TRANSLATION	protein_coding	-	CCDS23963.1	5	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000138035	ENSMUSP00000121052	TRANSLATION	protein_coding	stop	-	2	56	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000001211	Agpat3	ENSMUST00000146296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001211	Agpat3	ENSMUST00000105389	ENSMUSP00000101028	TRANSLATION	protein_coding	-	CCDS23963.1	1	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000150828	ENSMUSP00000114885	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000001211	Agpat3	ENSMUST00000105388	ENSMUSP00000101027	TRANSLATION	protein_coding	-	CCDS23963.1	5	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000166360	ENSMUSP00000132954	TRANSLATION	protein_coding	-	CCDS23963.1	1	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000001240	ENSMUSP00000001240	TRANSLATION	protein_coding	-	CCDS23963.1	1	376	0	0	19.5	141.8	5	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001211	Agpat3	ENSMUST00000139282	ENSMUSP00000119713	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	23.3	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000001211	Agpat3	ENSMUST00000219932	ENSMUSP00000151528	TRANSLATION	nonsense_mediated_decay	start	-	3	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019850	Tnfaip3	ENSMUST00000019997	ENSMUSP00000019997	TRANSLATION	protein_coding	-	CCDS23715.1	1	775	0	7.25	1.5	222.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019850	Tnfaip3	ENSMUST00000122863	ENSMUSP00000116318	TRANSLATION	protein_coding	stop	-	5	121	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019850	Tnfaip3	ENSMUST00000146388	ENSMUSP00000120627	TRANSLATION	protein_coding	stop	-	2	86	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019850	Tnfaip3	ENSMUST00000105527	ENSMUSP00000101167	TRANSLATION	protein_coding	-	CCDS23715.1	1	775	0	7.25	1.5	222.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019850	Tnfaip3	ENSMUST00000154590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019850	Tnfaip3	ENSMUST00000154749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035365	Parpbp	ENSMUST00000048518	ENSMUSP00000038375	TRANSLATION	protein_coding	-	CCDS36022.1	1	573	0	1.49	0.5	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000035365	Parpbp	ENSMUST00000164121	ENSMUSP00000130777	TRANSLATION	protein_coding	stop	-	3	202	0	0.8	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035365	Parpbp	ENSMUST00000164803	ENSMUSP00000128043	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000035365	Parpbp	ENSMUST00000168163	ENSMUSP00000128492	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000064050	ENSMUSP00000063504	TRANSLATION	protein_coding	-	CCDS23886.1	5	120	0	0	7.5	91.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020083	Fam241b	ENSMUST00000142796	ENSMUSP00000116424	TRANSLATION	protein_coding	-	CCDS23886.1	1	120	0	0	7.5	91.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020083	Fam241b	ENSMUST00000141144	ENSMUSP00000119982	TRANSLATION	protein_coding	stop	-	2	99	0	0	0	54.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000150057	ENSMUSP00000114453	TRANSLATION	protein_coding	stop	-	5	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000141724	ENSMUSP00000119343	TRANSLATION	protein_coding	stop	-	3	122	0	0	0	54.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000138450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020083	Fam241b	ENSMUST00000142821	ENSMUSP00000119289	TRANSLATION	protein_coding	-	CCDS23886.1	5	120	0	0	7.5	91.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020083	Fam241b	ENSMUST00000156798	ENSMUSP00000115712	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000124615	ENSMUSP00000118912	TRANSLATION	protein_coding	-	CCDS23886.1	1	120	0	0	7.5	91.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020083	Fam241b	ENSMUST00000027719	ENSMUSP00000027719	TRANSLATION	protein_coding	-	-	3	100	0	0	0	91.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000020083	Fam241b	ENSMUST00000125704	ENSMUSP00000115865	TRANSLATION	protein_coding	-	CCDS23886.1	1	120	0	0	7.5	91.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000060904	Arl1	ENSMUST00000170137	ENSMUSP00000127889	TRANSLATION	protein_coding	stop	-	5	52	8	1.5	0	64.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060904	Arl1	ENSMUST00000080379	ENSMUSP00000079246	TRANSLATION	protein_coding	stop	-	3	138	15	3.75	0	218.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060904	Arl1	ENSMUST00000116234	ENSMUSP00000111942	TRANSLATION	protein_coding	-	CCDS36025.1	1	181	18	5.08	19.3	258.9	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000061315	Naca	ENSMUST00000092048	ENSMUSP00000089680	TRANSLATION	protein_coding	-	CCDS48723.1	1	2187	0	1.6	0.5	85.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000061315	Naca	ENSMUST00000073868	ENSMUSP00000073532	TRANSLATION	protein_coding	-	CCDS24258.1	1	215	0	1.6	16.2	85.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040521	Tsfm	ENSMUST00000138556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040521	Tsfm	ENSMUST00000145476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040521	Tsfm	ENSMUST00000140564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040521	Tsfm	ENSMUST00000134917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040521	Tsfm	ENSMUST00000152054	ENSMUSP00000122669	TRANSLATION	protein_coding	-	-	3	206	0	2	0	0	0	-2,2	-	-	0	MINOR
ENSMUSG00000040521	Tsfm	ENSMUST00000120547	ENSMUSP00000113446	TRANSLATION	protein_coding	-	-	1	193	0	4	0	0	0	-2,2	-	-	4.002	MINOR
ENSMUSG00000040521	Tsfm	ENSMUST00000040560	ENSMUSP00000042134	TRANSLATION	protein_coding	-	CCDS24222.1	1	324	0	5	1.5	0	0	-2,2	-	-	6	PRINCIPAL:1
ENSMUSG00000019814	Ltv1	ENSMUST00000019950	ENSMUSP00000019950	TRANSLATION	protein_coding	-	CCDS35845.1	1	470	0	0	0.5	281.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019814	Ltv1	ENSMUST00000219824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019905	Gprc6a	ENSMUST00000218684	ENSMUSP00000152031	TRANSLATION	protein_coding	-	-	1	753	7	4.08	0	387.6	9	2,-1	-	-	12.966	MINOR
ENSMUSG00000019905	Gprc6a	ENSMUST00000219286	ENSMUSP00000151341	TRANSLATION	protein_coding	-	-	1	857	4	4.1	0	435.3	9	2,-1	-	-	13.296	MINOR
ENSMUSG00000019905	Gprc6a	ENSMUST00000020062	ENSMUSP00000020062	TRANSLATION	protein_coding	-	CCDS23834.1	1	928	7	4.5	0.5	457.5	9	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000095401	Olfr804	ENSMUST00000077312	ENSMUSP00000076540	TRANSLATION	protein_coding	-	CCDS24331.1	-	314	0	0.42	5.1	162.1	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095401	Olfr804	ENSMUST00000216747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095401	Olfr804	ENSMUST00000213331	ENSMUSP00000150132	TRANSLATION	protein_coding	-	CCDS24331.1	5	314	0	0.42	5.1	162.1	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020256	Aldh1l2	ENSMUST00000020497	ENSMUSP00000020497	TRANSLATION	protein_coding	-	CCDS24077.1	1	923	32	20.45	9.8	806.7	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000020256	Aldh1l2	ENSMUST00000146640	ENSMUSP00000117076	TRANSLATION	protein_coding	-	-	1	810	32	18.45	0	749.9	0	-4,-5	-	-	10.59	MINOR
ENSMUSG00000020256	Aldh1l2	ENSMUST00000141184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020256	Aldh1l2	ENSMUST00000147381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020256	Aldh1l2	ENSMUST00000138858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020256	Aldh1l2	ENSMUST00000125193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020256	Aldh1l2	ENSMUST00000143793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001155	Ftcd	ENSMUST00000001183	ENSMUSP00000001183	TRANSLATION	protein_coding	-	CCDS23950.1	1	541	1	12.25	7.3	698.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001155	Ftcd	ENSMUST00000146344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001155	Ftcd	ENSMUST00000137347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020096	Tbata	ENSMUST00000121297	ENSMUSP00000113253	TRANSLATION	protein_coding	-	CCDS23874.2	1	192	0	0	0.5	109.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000148181	ENSMUSP00000151940	TRANSLATION	protein_coding	-	-	1	102	0	0	0	68.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000131879	ENSMUSP00000118942	TRANSLATION	nonsense_mediated_decay	-	-	5	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000143207	ENSMUSP00000151724	TRANSLATION	protein_coding	-	-	1	64	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000126831	ENSMUSP00000119957	TRANSLATION	nonsense_mediated_decay	start	-	1	157	0	0	0	153.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000122261	ENSMUSP00000113902	TRANSLATION	protein_coding	-	CCDS48572.1	5	359	0	0	0.5	253.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020096	Tbata	ENSMUST00000151886	ENSMUSP00000151775	TRANSLATION	protein_coding	-	-	1	66	0	0	0	38.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000140456	ENSMUSP00000151410	TRANSLATION	protein_coding	-	-	5	100	0	0	0	43.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020096	Tbata	ENSMUST00000035894	ENSMUSP00000036422	TRANSLATION	protein_coding	-	CCDS23873.1	5	393	0	0	0.5	209.6	0	-4,-5	-	-	3.354	MINOR
ENSMUSG00000004931	Apba3	ENSMUST00000217688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004931	Apba3	ENSMUST00000217754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004931	Apba3	ENSMUST00000218297	ENSMUSP00000151384	TRANSLATION	protein_coding	start	-	3	164	0	2.07	0	45	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004931	Apba3	ENSMUST00000057798	ENSMUSP00000050995	TRANSLATION	protein_coding	-	CCDS24050.1	1	571	0	7.73	1.5	240	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004931	Apba3	ENSMUST00000218146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004931	Apba3	ENSMUST00000220297	ENSMUSP00000151985	TRANSLATION	protein_coding	-	CCDS24050.1	5	571	0	7.73	1.5	240	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004931	Apba3	ENSMUST00000219460	ENSMUSP00000151423	TRANSLATION	protein_coding	start/stop	-	5	239	0	3.9	0	166.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004931	Apba3	ENSMUST00000218742	ENSMUSP00000151924	TRANSLATION	protein_coding	stop	-	3	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004931	Apba3	ENSMUST00000219919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004931	Apba3	ENSMUST00000219304	ENSMUSP00000151614	TRANSLATION	protein_coding	stop	-	2	131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004931	Apba3	ENSMUST00000219294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058589	Anks1b	ENSMUST00000182192	ENSMUSP00000138701	TRANSLATION	protein_coding	stop	-	5	37	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182966	ENSMUSP00000138610	TRANSLATION	protein_coding	-	-	5	291	0	4.712	6.5	75.8	0	-4,-6	-	-	1.989	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000179337	ENSMUSP00000136410	TRANSLATION	protein_coding	-	CCDS83746.1	5	266	0	4.712	5.3	75.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182202	ENSMUSP00000138398	TRANSLATION	protein_coding	stop	-	5	28	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183136	ENSMUSP00000138738	TRANSLATION	protein_coding	-	-	5	509	0	8.608	5.3	225.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000099368	ENSMUSP00000096968	TRANSLATION	protein_coding	-	-	5	932	0	8.39	0	255.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182550	ENSMUSP00000138643	TRANSLATION	protein_coding	-	-	5	511	0	8.608	9.3	225.8	0	-4,-5	-	-	3	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182907	ENSMUSP00000138614	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000179694	ENSMUSP00000136146	TRANSLATION	protein_coding	-	CCDS83746.1	5	266	0	4.712	5.3	75.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182600	ENSMUSP00000138650	TRANSLATION	protein_coding	-	-	5	388	0	7.858	0	163	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000182053	ENSMUSP00000138644	TRANSLATION	protein_coding	-	-	5	394	0	8.608	2.4	225.8	0	-4,-6	-	-	0.507	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183109	ENSMUSP00000138667	TRANSLATION	protein_coding	start	-	1	138	0	0.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000183012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000182284	ENSMUSP00000138794	TRANSLATION	protein_coding	-	CCDS59552.1	5	451	0	8.608	1.7	225.8	0	-4,-5	-	-	0.252	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182113	ENSMUSP00000138655	TRANSLATION	protein_coding	-	CCDS59551.1	5	510	0	8.608	5.3	225.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000182045	ENSMUSP00000138679	TRANSLATION	protein_coding	-	-	3	76	0	1.08	0	32.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182356	ENSMUSP00000138234	TRANSLATION	protein_coding	-	CCDS59554.1	5	404	0	7.858	0.5	163	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182430	ENSMUSP00000138660	TRANSLATION	protein_coding	-	CCDS59553.1	5	426	0	8.608	5.1	225.8	0	-4,-5	-	-	1.482	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182595	ENSMUSP00000138314	TRANSLATION	protein_coding	-	-	5	486	0	8.608	8	225.8	0	-4,-5	-	-	2.529	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183024	ENSMUSP00000138256	TRANSLATION	protein_coding	start	-	5	128	0	1.066	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000099364	ENSMUSP00000096965	TRANSLATION	protein_coding	-	-	5	460	0	8.608	6.3	225.8	0	-4,-5	-	-	1.917	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182960	ENSMUSP00000138222	TRANSLATION	protein_coding	-	-	5	450	0	8.608	1.7	225.8	0	-4,-5	-	-	0.252	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182083	ENSMUSP00000138576	TRANSLATION	protein_coding	-	-	2	19	0	0.33	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058589	Anks1b	ENSMUST00000099366	ENSMUSP00000096967	TRANSLATION	protein_coding	-	CCDS83746.1	5	266	0	4.712	5.3	75.8	0	-4,-5	-	-	1.554	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000183156	ENSMUSP00000138539	TRANSLATION	protein_coding	-	-	5	1259	0	13.588	5.3	357.7	0	-4,-5	-	-	13.554	PRINCIPAL:1
ENSMUSG00000058589	Anks1b	ENSMUST00000182786	ENSMUSP00000138720	TRANSLATION	protein_coding	-	-	5	357	0	7.042	1.2	136.3	0	-4,-5	-	-	0.072	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182936	ENSMUSP00000138209	TRANSLATION	protein_coding	stop	-	5	562	0	4.18	0	127.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058589	Anks1b	ENSMUST00000182427	ENSMUSP00000138480	TRANSLATION	protein_coding	stop	-	5	223	0	4.028	0	150	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062914	Olfr777	ENSMUST00000204573	ENSMUSP00000145475	TRANSLATION	protein_coding	-	CCDS24312.1	5	311	0	0.36	6.3	144.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062914	Olfr777	ENSMUST00000080313	ENSMUSP00000079191	TRANSLATION	protein_coding	-	CCDS24312.1	-	311	0	0.36	6.3	144.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019977	Hbs1l	ENSMUST00000218032	ENSMUSP00000151421	TRANSLATION	protein_coding	stop	-	5	104	0	1.732	0	62.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019977	Hbs1l	ENSMUST00000020153	ENSMUSP00000020153	TRANSLATION	protein_coding	-	-	1	679	16	12.712	1.5	333.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019977	Hbs1l	ENSMUST00000219345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019977	Hbs1l	ENSMUST00000218850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019977	Hbs1l	ENSMUST00000218785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019977	Hbs1l	ENSMUST00000092674	ENSMUSP00000090344	TRANSLATION	protein_coding	-	CCDS48513.1	1	612	0	2.732	0.5	69.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019977	Hbs1l	ENSMUST00000218714	ENSMUSP00000151897	TRANSLATION	protein_coding	stop	-	5	162	7	3.85	0	72.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019977	Hbs1l	ENSMUST00000220392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019977	Hbs1l	ENSMUST00000219915	ENSMUSP00000151689	TRANSLATION	protein_coding	-	CCDS35862.1	1	682	16	12.712	1.5	333.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000019977	Hbs1l	ENSMUST00000061324	ENSMUSP00000135902	TRANSLATION	protein_coding	-	-	3	140	0	2.732	0	69.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000099009	Rdh16f1	ENSMUST00000128247	ENSMUSP00000116574	TRANSLATION	protein_coding,RT	-	-	1	317	27	2.4	1.5	136.7	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000019992	Mtfr2	ENSMUST00000169712	ENSMUSP00000129315	TRANSLATION	protein_coding	-	CCDS48511.1	1	361	0	0	0.5	286.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019992	Mtfr2	ENSMUST00000217608	ENSMUSP00000150399	TRANSLATION	protein_coding	stop	-	3	186	0	0	0	139.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019992	Mtfr2	ENSMUST00000213374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034620	Rxylt1	ENSMUST00000129359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034620	Rxylt1	ENSMUST00000141057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034620	Rxylt1	ENSMUST00000140299	ENSMUSP00000119308	TRANSLATION	protein_coding	-	CCDS24214.1	1	444	0	0	1.5	0	0	2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000034620	Rxylt1	ENSMUST00000125506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034620	Rxylt1	ENSMUST00000135083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034620	Rxylt1	ENSMUST00000038772	ENSMUSP00000045258	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	2,-5	-	-	-1	MINOR
ENSMUSG00000112027	Gm9045	ENSMUST00000219760	ENSMUSP00000151826	TRANSLATION	protein_coding	-	-	-	802	0	1	15	351.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038332	Sesn1	ENSMUST00000099931	ENSMUSP00000097515	TRANSLATION	protein_coding	-	CCDS48550.1	1	551	0	7.7	7.5	696.2	0	-4,-5	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000038332	Sesn1	ENSMUST00000041438	ENSMUSP00000043034	TRANSLATION	protein_coding	-	CCDS23809.1	1	492	0	7.9	7.5	696.2	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000038332	Sesn1	ENSMUST00000214835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112241	Gm49325	ENSMUST00000174113	ENSMUSP00000134357	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	75	0	2.08	0	67.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034949	Zfr2	ENSMUST00000127526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034949	Zfr2	ENSMUST00000144087	ENSMUSP00000115001	TRANSLATION	protein_coding	stop	-	1	72	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034949	Zfr2	ENSMUST00000137999	ENSMUSP00000120853	TRANSLATION	protein_coding	start	-	3	178	2	4.08	0	102	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034949	Zfr2	ENSMUST00000117798	ENSMUSP00000113913	TRANSLATION	protein_coding	-	CCDS48642.1	5	874	4	7.03	0.5	270.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000034949	Zfr2	ENSMUST00000132174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034949	Zfr2	ENSMUST00000148029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034949	Zfr2	ENSMUST00000128182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050478	Olfr807	ENSMUST00000217106	ENSMUSP00000150657	TRANSLATION	protein_coding	-	CCDS24334.1	5	311	0	0.36	1.5	152.9	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050478	Olfr807	ENSMUST00000213379	ENSMUSP00000149172	TRANSLATION	protein_coding	-	CCDS24334.1	5	311	0	0.36	1.5	152.9	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050478	Olfr807	ENSMUST00000059038	ENSMUSP00000049924	TRANSLATION	protein_coding	-	CCDS24334.1	-	311	0	0.36	1.5	152.9	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054934	Kcnmb4	ENSMUST00000068233	ENSMUSP00000065384	TRANSLATION	protein_coding	-	CCDS24184.1	1	210	0	0	11.8	252.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000054934	Kcnmb4	ENSMUST00000087965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054934	Kcnmb4	ENSMUST00000164271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054934	Kcnmb4	ENSMUST00000091477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094311	Rfpl4b	ENSMUST00000179279	ENSMUSP00000137446	TRANSLATION	protein_coding	-	CCDS56699.1	5	266	8	0.32	0.5	32.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000009092	Derl3	ENSMUST00000009236	ENSMUSP00000009236	TRANSLATION	protein_coding	-	CCDS23935.1	1	228	0	0	2.8	255.8	2	-2,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000009092	Derl3	ENSMUST00000219568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009092	Derl3	ENSMUST00000220190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009092	Derl3	ENSMUST00000218932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009092	Derl3	ENSMUST00000218718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009092	Derl3	ENSMUST00000218506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009092	Derl3	ENSMUST00000219994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009092	Derl3	ENSMUST00000217811	ENSMUSP00000151623	TRANSLATION	protein_coding	-	-	1	227	0	0	2.8	248.1	2	-1,-3	-	-	5.538	ALTERNATIVE:2
ENSMUSG00000025400	Tac2	ENSMUST00000026466	ENSMUSP00000026466	TRANSLATION	protein_coding	-	CCDS24248.1	1	116	0	0	1.5	96.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025400	Tac2	ENSMUST00000179960	ENSMUSP00000136622	TRANSLATION	protein_coding	-	CCDS24248.1	1	116	0	0	1.5	96.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025400	Tac2	ENSMUST00000217729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025400	Tac2	ENSMUST00000218048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000901	Mmp11	ENSMUST00000219728	ENSMUSP00000151366	TRANSLATION	protein_coding	stop	-	5	37	11	1.33	0	40	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000901	Mmp11	ENSMUST00000133897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000901	Mmp11	ENSMUST00000000924	ENSMUSP00000000924	TRANSLATION	protein_coding	-	CCDS23937.1	1	492	21	6.37	1.5	362.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000901	Mmp11	ENSMUST00000152222	ENSMUSP00000116279	TRANSLATION	protein_coding	start	-	5	154	1	1.14	0	75.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000901	Mmp11	ENSMUST00000132869	ENSMUSP00000120800	TRANSLATION	nonsense_mediated_decay	start	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000901	Mmp11	ENSMUST00000120281	ENSMUSP00000112940	TRANSLATION	protein_coding	-	CCDS23937.1	1	492	21	6.37	1.5	362.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039981	Zc3h12d	ENSMUST00000039484	ENSMUSP00000040217	TRANSLATION	protein_coding	-	CCDS48496.1	1	533	4	3.6	1.5	219.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000296	Tpd52l1	ENSMUST00000213639	ENSMUSP00000150184	TRANSLATION	protein_coding	-	-	2	191	0	0	4.6	245.7	0	-4,-5	-	-	7.756	PRINCIPAL:1
ENSMUSG00000000296	Tpd52l1	ENSMUST00000000305	ENSMUSP00000000305	TRANSLATION	protein_coding	-	CCDS35877.1	1	204	0	0	5.1	240	0	-4,-5	-	-	7.658	MINOR
ENSMUSG00000000296	Tpd52l1	ENSMUST00000214644	ENSMUSP00000149749	TRANSLATION	protein_coding	-	-	1	131	0	0	4.8	181	0	-4,-5	-	-	3.972	MINOR
ENSMUSG00000000296	Tpd52l1	ENSMUST00000215515	ENSMUSP00000149266	TRANSLATION	protein_coding	-	-	2	144	0	0	2.4	182.5	0	-4,-5	-	-	2.89	MINOR
ENSMUSG00000000296	Tpd52l1	ENSMUST00000213528	ENSMUSP00000149177	TRANSLATION	protein_coding	-	-	1	209	0	0	4.6	239.8	0	-4,-5	-	-	7.402	MINOR
ENSMUSG00000019775	Rgs17	ENSMUST00000064225	ENSMUSP00000065825	TRANSLATION	protein_coding	-	CCDS56686.1	1	230	0	2.78	0.5	124.1	0	-4,-2	-	-	12	MINOR
ENSMUSG00000019775	Rgs17	ENSMUST00000019909	ENSMUSP00000019909	TRANSLATION	protein_coding	stop	-	5	163	0	1.78	0	78.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019775	Rgs17	ENSMUST00000117676	ENSMUSP00000113519	TRANSLATION	protein_coding	-	CCDS56685.1	1	210	0	2.78	8.2	124.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000019775	Rgs17	ENSMUST00000131996	ENSMUSP00000116291	TRANSLATION	protein_coding	-	CCDS56685.1	1	210	0	2.78	8.2	124.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074862	BC025920	ENSMUST00000126940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074862	BC025920	ENSMUST00000119753	ENSMUSP00000113471	TRANSLATION	protein_coding	-	-	1	128	11	0.64	0	49.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000074862	BC025920	ENSMUST00000121138	ENSMUSP00000113598	TRANSLATION	protein_coding	-	-	1	128	11	0.64	0	49.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000074862	BC025920	ENSMUST00000119492	ENSMUSP00000113938	TRANSLATION	protein_coding	-	-	1	128	11	0.64	0	49.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000074862	BC025920	ENSMUST00000099442	ENSMUSP00000097041	TRANSLATION	protein_coding	-	-	-	128	11	0.64	0	49.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000113640	Adat3	ENSMUST00000221960	ENSMUSP00000152275	TRANSLATION	protein_coding	stop	-	3	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113640	Adat3	ENSMUST00000221670	ENSMUSP00000152839	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000113640	Adat3	ENSMUST00000038411	ENSMUSP00000040551	TRANSLATION	protein_coding	-	CCDS48637.1	2	349	4	0.6	1.5	54.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040033	Stat2	ENSMUST00000217727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040033	Stat2	ENSMUST00000220142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040033	Stat2	ENSMUST00000220277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040033	Stat2	ENSMUST00000218863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040033	Stat2	ENSMUST00000085708	ENSMUSP00000082855	TRANSLATION	protein_coding	-	CCDS24269.1	1	922	0	14.537	0.5	594.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000040033	Stat2	ENSMUST00000217852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040033	Stat2	ENSMUST00000105238	ENSMUSP00000100872	TRANSLATION	protein_coding	-	-	1	923	0	14.537	0.5	593.5	0	-4,-7	-	-	11.964	ALTERNATIVE:2
ENSMUSG00000040033	Stat2	ENSMUST00000218862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020213	Glipr1l1	ENSMUST00000073617	ENSMUSP00000073302	TRANSLATION	protein_coding	-	CCDS48691.1	1	236	2	2.82	0.5	97.5	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000020196	Cabin1	ENSMUST00000219806	ENSMUSP00000151879	TRANSLATION	protein_coding	start/stop	-	3	191	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020196	Cabin1	ENSMUST00000217664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020196	Cabin1	ENSMUST00000001712	ENSMUSP00000001712	TRANSLATION	protein_coding	-	CCDS35938.1	5	2187	0	2.4	0.5	79.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020196	Cabin1	ENSMUST00000220009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020196	Cabin1	ENSMUST00000219682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020196	Cabin1	ENSMUST00000217810	ENSMUSP00000152043	TRANSLATION	protein_coding	start	-	1	473	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020196	Cabin1	ENSMUST00000218486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020196	Cabin1	ENSMUST00000218469	ENSMUSP00000151933	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020196	Cabin1	ENSMUST00000218878	ENSMUSP00000151485	TRANSLATION	nonsense_mediated_decay	start	-	5	32	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020196	Cabin1	ENSMUST00000218480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020196	Cabin1	ENSMUST00000218814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020196	Cabin1	ENSMUST00000218790	ENSMUSP00000151436	TRANSLATION	nonsense_mediated_decay	start	-	3	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020196	Cabin1	ENSMUST00000218951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061780	Cfd	ENSMUST00000061653	ENSMUSP00000056836	TRANSLATION	protein_coding	-	CCDS23995.1	1	259	6	4.4	0.5	222.1	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000061780	Cfd	ENSMUST00000217837	ENSMUSP00000151894	TRANSLATION	protein_coding	-	-	1	258	6	4.4	0.5	222.1	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000091101	Gm4302	ENSMUST00000168769	ENSMUSP00000131605	TRANSLATION	protein_coding	-	CCDS48680.1	-	294	0	0.8	0.5	70.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063953	Amd2	ENSMUST00000080898	ENSMUSP00000079703	TRANSLATION	protein_coding	-	CCDS48536.1	-	334	5	1	8.8	415.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000096131	Gm9639	ENSMUST00000172205	ENSMUSP00000151514	TRANSLATION	protein_coding	-	-	-	225	0	0	0.5	63.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038248	Sobp	ENSMUST00000189987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038248	Sobp	ENSMUST00000040275	ENSMUSP00000040072	TRANSLATION	protein_coding	-	CCDS35890.1	1	864	4	0	1.5	305.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000019843	Fyn	ENSMUST00000146287	ENSMUSP00000114188	TRANSLATION	protein_coding	-	CCDS23788.1	1	534	16	10.35	10.8	478.9	0	-4,-5	-	-	20.2	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000099967	ENSMUSP00000097547	TRANSLATION	protein_coding	-	CCDS48538.1	1	537	16	10.35	17.3	482.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019843	Fyn	ENSMUST00000136659	ENSMUSP00000118131	TRANSLATION	protein_coding	-	-	5	482	11	9.35	7.6	460.1	0	-4,-5	-	-	12.954	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000135242	ENSMUSP00000117111	TRANSLATION	protein_coding	-	CCDS23788.1	1	534	16	10.35	10.8	478.9	0	-4,-5	-	-	20.2	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000123205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019843	Fyn	ENSMUST00000063091	ENSMUSP00000057707	TRANSLATION	protein_coding	-	CCDS23788.1	1	534	16	10.35	10.8	478.9	0	-4,-5	-	-	20.2	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000148152	ENSMUSP00000123445	TRANSLATION	protein_coding	stop	-	3	114	0	1.6	0	36.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000126486	ENSMUSP00000115233	TRANSLATION	protein_coding	-	CCDS23788.1	1	534	16	10.35	10.8	478.9	0	-4,-5	-	-	20.2	MINOR
ENSMUSG00000019843	Fyn	ENSMUST00000157009	ENSMUSP00000117837	TRANSLATION	protein_coding	stop	-	2	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034881	Tbxa2r	ENSMUST00000220312	ENSMUSP00000151447	TRANSLATION	protein_coding	-	CCDS24053.1	1	341	0	0.28	1.5	79.4	6	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034881	Tbxa2r	ENSMUST00000105325	ENSMUSP00000100962	TRANSLATION	protein_coding	-	CCDS24053.1	1	341	0	0.28	1.5	79.4	6	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001119	Col6a1	ENSMUST00000137599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001119	Col6a1	ENSMUST00000001147	ENSMUSP00000001147	TRANSLATION	protein_coding	-	CCDS23952.1	1	1025	13	10.463	0.5	384.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040502	Marchf9	ENSMUST00000040307	ENSMUSP00000041581	TRANSLATION	protein_coding	-	CCDS24225.1	1	348	8	0.8	5.1	42.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000023175	Bsg	ENSMUST00000180235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023175	Bsg	ENSMUST00000179201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023175	Bsg	ENSMUST00000178383	ENSMUSP00000137126	TRANSLATION	protein_coding	start	-	5	197	0	4.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023175	Bsg	ENSMUST00000067036	ENSMUSP00000070751	TRANSLATION	protein_coding	-	CCDS23985.1	1	389	0	8.08	0.5	81.9	3	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000023175	Bsg	ENSMUST00000179781	ENSMUSP00000136487	TRANSLATION	protein_coding	-	CCDS35967.1	1	273	0	7.08	0.5	39.7	3	1,-3	-	-	6.912	MINOR
ENSMUSG00000023175	Bsg	ENSMUST00000105381	ENSMUSP00000101020	TRANSLATION	protein_coding	-	-	1	218	0	5.58	0	39.7	3	-4,-5	-	-	3.912	MINOR
ENSMUSG00000047514	Tspyl1	ENSMUST00000061372	ENSMUSP00000063051	TRANSLATION	protein_coding	-	CCDS23777.1	-	379	0	0.4	1.5	69.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057729	Prtn3	ENSMUST00000166201	ENSMUSP00000129585	TRANSLATION	protein_coding	start	-	3	126	4	2	0	76.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000057729	Prtn3	ENSMUST00000165982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057729	Prtn3	ENSMUST00000164134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057729	Prtn3	ENSMUST00000006679	ENSMUSP00000006679	TRANSLATION	protein_coding	-	CCDS23993.1	1	254	14	4.15	1.5	198.7	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000057729	Prtn3	ENSMUST00000171489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057729	Prtn3	ENSMUST00000163188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000111915	Gm3285	ENSMUST00000218443	ENSMUSP00000151795	TRANSLATION	protein_coding	-	-	-	201	0	0	0.5	46.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058806	Col13a1	ENSMUST00000105451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058806	Col13a1	ENSMUST00000105452	ENSMUSP00000101092	TRANSLATION	protein_coding	-	-	5	709	0	15.86	0	222.2	0	-4,-7	-	-	8.814	MINOR
ENSMUSG00000058806	Col13a1	ENSMUST00000153120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058806	Col13a1	ENSMUST00000145469	ENSMUSP00000117248	TRANSLATION	protein_coding	start	-	5	244	0	6.83	0	115.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058806	Col13a1	ENSMUST00000051826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058806	Col13a1	ENSMUST00000105454	ENSMUSP00000101094	TRANSLATION	protein_coding	-	CCDS35918.1	1	739	0	16.69	1.5	247.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058806	Col13a1	ENSMUST00000239309	ENSMUSP00000159227	TRANSLATION	protein_coding	start	-	-	80	0	2.1	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058806	Col13a1	ENSMUST00000105453	ENSMUSP00000101093	TRANSLATION	protein_coding	-	CCDS78821.1	2	675	0	15.21	0.5	217.1	0	-4,-7	-	-	7.212	MINOR
ENSMUSG00000020183	Cpm	ENSMUST00000123374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020183	Cpm	ENSMUST00000141991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020183	Cpm	ENSMUST00000020399	ENSMUSP00000020399	TRANSLATION	protein_coding	-	CCDS48696.1	1	443	8	8	1.5	295.8	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000020183	Cpm	ENSMUST00000138020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094186	Gm1553	ENSMUST00000177934	ENSMUSP00000135907	TRANSLATION	protein_coding	-	CCDS56738.1	1	94	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000112781	Gm9046	ENSMUST00000218329	ENSMUSP00000151963	TRANSLATION	protein_coding	-	-	-	802	0	1	15	342.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025350	Rdh5	ENSMUST00000135161	ENSMUSP00000115182	TRANSLATION	protein_coding	stop	-	5	107	5	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025350	Rdh5	ENSMUST00000026406	ENSMUSP00000026406	TRANSLATION	protein_coding	-	CCDS24298.1	1	318	28	4.96	1.7	128.5	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025350	Rdh5	ENSMUST00000145616	ENSMUSP00000123358	TRANSLATION	protein_coding	stop	-	2	175	20	3.23	0	88.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000025350	Rdh5	ENSMUST00000139217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025350	Rdh5	ENSMUST00000137747	ENSMUSP00000116558	TRANSLATION	protein_coding	start/stop	-	5	154	14	2.53	0	62.4	0	2,-1	-	-	-1	MINOR
ENSMUSG00000025350	Rdh5	ENSMUST00000153935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025350	Rdh5	ENSMUST00000149961	ENSMUSP00000123183	TRANSLATION	protein_coding	stop	-	3	144	20	3.4	0	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040624	Plekhg1	ENSMUST00000136671	ENSMUSP00000119950	TRANSLATION	protein_coding	start	-	1	1446	0	5.91	0	151.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040624	Plekhg1	ENSMUST00000141367	ENSMUSP00000116652	TRANSLATION	nonsense_mediated_decay	start	-	3	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040624	Plekhg1	ENSMUST00000131525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040624	Plekhg1	ENSMUST00000120274	ENSMUSP00000114056	TRANSLATION	protein_coding	-	CCDS56671.1	5	1390	0	5.91	0.5	151.2	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000040624	Plekhg1	ENSMUST00000154727	ENSMUSP00000122131	TRANSLATION	protein_coding	start	-	5	1213	0	5.26	0	113.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040624	Plekhg1	ENSMUST00000042438	ENSMUSP00000040495	TRANSLATION	protein_coding	-	CCDS56671.1	1	1390	0	5.91	0.5	151.2	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000040624	Plekhg1	ENSMUST00000239159	ENSMUSP00000159056	TRANSLATION	protein_coding	-	-	-	1465	0	5.91	0	151.2	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000040624	Plekhg1	ENSMUST00000137111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040624	Plekhg1	ENSMUST00000144543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040624	Plekhg1	ENSMUST00000238840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049420	Tmem200a	ENSMUST00000066049	ENSMUSP00000064080	TRANSLATION	protein_coding	-	CCDS23755.1	1	491	0	0	5.3	211.4	2	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000049420	Tmem200a	ENSMUST00000219651	ENSMUSP00000151832	TRANSLATION	protein_coding	stop	-	3	237	0	0	0	211.4	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000049420	Tmem200a	ENSMUST00000219338	ENSMUSP00000151494	TRANSLATION	protein_coding	stop	-	5	180	0	0	0	211.4	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000049420	Tmem200a	ENSMUST00000218232	ENSMUSP00000151861	TRANSLATION	protein_coding	-	CCDS23755.1	1	491	0	0	5.3	211.4	2	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000049420	Tmem200a	ENSMUST00000217910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049420	Tmem200a	ENSMUST00000219872	ENSMUSP00000151559	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000118646	AC160405.1	ENSMUST00000239481	ENSMUSP00000159333	TRANSLATION	protein_coding	-	-	-	40	0	0	0	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000112419	Gm9044	ENSMUST00000179851	ENSMUSP00000151369	TRANSLATION	protein_coding	-	-	-	802	0	1	15	348.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000044617	Zbtb39	ENSMUST00000054287	ENSMUSP00000052717	TRANSLATION	protein_coding	-	CCDS24249.1	1	712	28	0	6.3	117.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000094012	Gm10024	ENSMUST00000075421	ENSMUSP00000074876	TRANSLATION	protein_coding	-	CCDS48605.1	-	119	0	0	1.5	27	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060205	Olfr57	ENSMUST00000082244	ENSMUSP00000080872	TRANSLATION	protein_coding	-	CCDS23975.1	-	319	0	0.42	1.5	166.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060205	Olfr57	ENSMUST00000203906	ENSMUSP00000144814	TRANSLATION	protein_coding	-	CCDS23975.1	5	319	0	0.42	1.5	166.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047712	Ust	ENSMUST00000061601	ENSMUSP00000052017	TRANSLATION	protein_coding	-	CCDS35835.1	1	407	3	2.955	6.4	119.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000047712	Ust	ENSMUST00000219116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069565	Dazap1	ENSMUST00000156935	ENSMUSP00000117497	TRANSLATION	protein_coding	stop	-	3	171	0	4.5	0	123.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069565	Dazap1	ENSMUST00000105361	ENSMUSP00000101000	TRANSLATION	protein_coding	-	CCDS48627.1	1	406	0	5.43	11	125.2	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000069565	Dazap1	ENSMUST00000151619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069565	Dazap1	ENSMUST00000105362	ENSMUSP00000101001	TRANSLATION	protein_coding	-	CCDS35977.1	1	405	0	5.43	11	125.2	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000069565	Dazap1	ENSMUST00000150328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069565	Dazap1	ENSMUST00000138032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069565	Dazap1	ENSMUST00000092305	ENSMUSP00000089958	TRANSLATION	protein_coding	-	CCDS48626.1	1	406	0	5.43	11	125.2	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000045912	C2cd4c	ENSMUST00000178228	ENSMUSP00000136013	TRANSLATION	protein_coding	-	CCDS23979.1	1	419	0	0	6.3	31	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000045912	C2cd4c	ENSMUST00000059699	ENSMUSP00000059433	TRANSLATION	protein_coding	-	CCDS23979.1	1	419	0	0	6.3	31	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000062593	Gm49339	ENSMUST00000218123	ENSMUSP00000151827	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	296	0	2.5	0	64.1	2	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000062593	Gm49339	ENSMUST00000217706	ENSMUSP00000151978	TRANSLATION	protein_coding,RT	-	-	1	296	0	2.5	0	64.1	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000062593	Gm49339	ENSMUST00000219696	ENSMUSP00000151486	TRANSLATION	protein_coding,RT	-	-	1	335	0	2.5	0.5	64.1	2	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000019944	Rhobtb1	ENSMUST00000168117	ENSMUSP00000131509	TRANSLATION	nonsense_mediated_decay	-	-	5	101	12	1.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000164212	ENSMUSP00000128356	TRANSLATION	protein_coding	stop	-	5	97	12	1.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000167384	ENSMUSP00000131222	TRANSLATION	protein_coding	-	-	5	633	18	2.805	0	52.1	0	-4,-5	-	-	9.648	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000169569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019944	Rhobtb1	ENSMUST00000067908	ENSMUSP00000065095	TRANSLATION	protein_coding	-	CCDS35930.1	1	695	20	3.805	6.3	135.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019944	Rhobtb1	ENSMUST00000167286	ENSMUSP00000131313	TRANSLATION	protein_coding	stop	-	3	93	12	0.84	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000020101	ENSMUSP00000020101	TRANSLATION	protein_coding	-	CCDS35930.1	1	695	20	3.805	6.3	135.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019944	Rhobtb1	ENSMUST00000164876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019944	Rhobtb1	ENSMUST00000172261	ENSMUSP00000128667	TRANSLATION	protein_coding	stop	-	3	98	12	1.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000163760	ENSMUSP00000127904	TRANSLATION	protein_coding	start	-	5	96	0	0.645	0	23.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019944	Rhobtb1	ENSMUST00000164034	ENSMUSP00000132068	TRANSLATION	protein_coding	-	CCDS35930.1	1	695	20	3.805	6.3	135.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019944	Rhobtb1	ENSMUST00000165765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019944	Rhobtb1	ENSMUST00000163497	ENSMUSP00000129119	TRANSLATION	protein_coding	stop	-	5	100	12	1.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055108	Phxr2	ENSMUST00000060761	ENSMUSP00000062790	TRANSLATION	protein_coding	-	-	-	65	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000019864	Rtn4ip1	ENSMUST00000214453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019864	Rtn4ip1	ENSMUST00000054418	ENSMUSP00000060940	TRANSLATION	protein_coding	-	CCDS23823.1	1	396	23	8.25	5.1	92.6	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000019864	Rtn4ip1	ENSMUST00000105492	ENSMUSP00000101131	TRANSLATION	protein_coding	-	-	3	172	14	4	0	92.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000019864	Rtn4ip1	ENSMUST00000214220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047090	Tmem198b	ENSMUST00000051011	ENSMUSP00000050451	TRANSLATION	protein_coding	-	CCDS24293.1	1	350	0	0	3.9	148.8	5	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000047090	Tmem198b	ENSMUST00000139227	ENSMUSP00000118082	TRANSLATION	nonsense_mediated_decay	-	-	5	96	0	0	0	53.6	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000047090	Tmem198b	ENSMUST00000152966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035963	Odf3l2	ENSMUST00000095464	ENSMUSP00000093117	TRANSLATION	protein_coding	-	CCDS23980.1	1	277	0	0	2.7	76.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038240	Pdss2	ENSMUST00000162758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038240	Pdss2	ENSMUST00000159139	ENSMUSP00000124864	TRANSLATION	protein_coding	-	CCDS48552.1	1	352	0	3.768	0.5	71.3	0	-4,0	-	-	10.398	MINOR
ENSMUSG00000038240	Pdss2	ENSMUST00000160823	ENSMUSP00000124046	TRANSLATION	nonsense_mediated_decay	-	-	1	348	0	3.768	0	71.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038240	Pdss2	ENSMUST00000095725	ENSMUSP00000093393	TRANSLATION	protein_coding	-	CCDS35891.1	1	401	0	4.568	4.1	71.3	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000038240	Pdss2	ENSMUST00000160108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038240	Pdss2	ENSMUST00000162008	ENSMUSP00000124440	TRANSLATION	protein_coding	start	-	3	138	0	1.82	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000020109	Dnajb12	ENSMUST00000142819	ENSMUSP00000118088	TRANSLATION	protein_coding	-	CCDS23867.1	1	376	0	2.43	3.9	189.4	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000020109	Dnajb12	ENSMUST00000131810	ENSMUSP00000116244	TRANSLATION	nonsense_mediated_decay	-	-	1	126	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020109	Dnajb12	ENSMUST00000147914	ENSMUSP00000116577	TRANSLATION	protein_coding	-	-	1	378	0	2.43	3.9	189.4	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000020109	Dnajb12	ENSMUST00000146590	ENSMUSP00000122056	TRANSLATION	protein_coding	-	CCDS23867.1	1	376	0	2.43	3.9	189.4	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000020109	Dnajb12	ENSMUST00000020309	ENSMUSP00000020309	TRANSLATION	protein_coding	-	CCDS23867.1	1	376	0	2.43	3.9	189.4	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000034781	Gna11	ENSMUST00000134354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034781	Gna11	ENSMUST00000146984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034781	Gna11	ENSMUST00000043604	ENSMUSP00000043190	TRANSLATION	protein_coding	-	CCDS24061.1	1	359	24	7	18.3	387	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020248	Nfyb	ENSMUST00000128397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020248	Nfyb	ENSMUST00000130911	ENSMUSP00000122403	TRANSLATION	protein_coding	-	CCDS48654.1	1	207	0	2.87	17.5	100	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020248	Nfyb	ENSMUST00000129640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020248	Nfyb	ENSMUST00000143749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020248	Nfyb	ENSMUST00000142523	ENSMUSP00000116039	TRANSLATION	protein_coding	stop	-	3	106	0	1.75	0	71.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020248	Nfyb	ENSMUST00000145561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020248	Nfyb	ENSMUST00000127832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046916	Myct1	ENSMUST00000051809	ENSMUSP00000050430	TRANSLATION	protein_coding	-	CCDS56681.1	1	188	0	0	1.5	257	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000091381	Vmn2r83	ENSMUST00000233240	ENSMUSP00000156717	TRANSLATION	nonsense_mediated_decay	-	-	-	237	0	1.85	0	65.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000091381	Vmn2r83	ENSMUST00000167976	ENSMUSP00000131426	TRANSLATION	protein_coding	-	CCDS48618.1	5	864	5	4.99	0.5	383.5	8	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000091381	Vmn2r83	ENSMUST00000233849	ENSMUSP00000156909	TRANSLATION	nonsense_mediated_decay	-	-	-	442	0	2.27	0	113.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000091381	Vmn2r83	ENSMUST00000233065	ENSMUSP00000156866	TRANSLATION	protein_coding	-	-	-	659	5	4.57	0	324	8	2,-2	-	-	12.59	MINOR
ENSMUSG00000091381	Vmn2r83	ENSMUST00000233629	ENSMUSP00000156663	TRANSLATION	nonsense_mediated_decay	-	-	-	70	0	0.4	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000035278	Plekhj1	ENSMUST00000219959	ENSMUSP00000151910	TRANSLATION	protein_coding	start	-	1	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035278	Plekhj1	ENSMUST00000219378	ENSMUSP00000151249	TRANSLATION	nonsense_mediated_decay	-	-	2	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035278	Plekhj1	ENSMUST00000218209	ENSMUSP00000151943	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035278	Plekhj1	ENSMUST00000219767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035278	Plekhj1	ENSMUST00000217735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035278	Plekhj1	ENSMUST00000036805	ENSMUSP00000042334	TRANSLATION	protein_coding	-	CCDS48640.1	1	164	0	0	1.5	36	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035278	Plekhj1	ENSMUST00000220002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035278	Plekhj1	ENSMUST00000220093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035278	Plekhj1	ENSMUST00000218036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074734	Taf7l2	ENSMUST00000219858	-	NO_TRANSLATION	transcribed_processed_pseudogene
ENSMUSG00000074734	Taf7l2	ENSMUST00000099261	ENSMUSP00000096867	TRANSLATION	protein_coding	-	CCDS48692.1	-	378	0	0.7	0.5	188.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074734	Taf7l2	ENSMUST00000220165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075045	Gm4981	ENSMUST00000099726	ENSMUSP00000097314	TRANSLATION	protein_coding	-	CCDS48564.1	-	291	0	0	0.5	41.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000078427	Sarnp	ENSMUST00000220150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078427	Sarnp	ENSMUST00000218622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078427	Sarnp	ENSMUST00000105230	ENSMUSP00000100863	TRANSLATION	protein_coding	-	CCDS36092.1	1	210	0	1.5	12.8	41	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078427	Sarnp	ENSMUST00000220381	ENSMUSP00000151317	TRANSLATION	nonsense_mediated_decay	-	-	1	147	0	1.5	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078427	Sarnp	ENSMUST00000219512	ENSMUSP00000151656	TRANSLATION	protein_coding	-	-	3	127	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000019851	Perp	ENSMUST00000019998	ENSMUSP00000019998	TRANSLATION	protein_coding	-	CCDS23714.1	1	193	0	0	6.3	42.4	0	-1,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000020218	Wif1	ENSMUST00000145691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020218	Wif1	ENSMUST00000020439	ENSMUSP00000020439	TRANSLATION	protein_coding	-	CCDS24209.1	1	379	3	9	6.3	168.9	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000020218	Wif1	ENSMUST00000175867	ENSMUSP00000135486	TRANSLATION	protein_coding	-	-	5	365	3	8.5	1	153.9	0	3,-2	-	-	13.098	MINOR
ENSMUSG00000019865	Nmbr	ENSMUST00000186382	ENSMUSP00000139612	TRANSLATION	nonsense_mediated_decay	-	-	1	257	0	2.48	0	138.3	8	-4,-6	-	-	-1	MINOR
ENSMUSG00000019865	Nmbr	ENSMUST00000187449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019865	Nmbr	ENSMUST00000191238	ENSMUSP00000139695	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000019865	Nmbr	ENSMUST00000190751	ENSMUSP00000140223	TRANSLATION	protein_coding	-	-	1	179	0	0.8	0	75.6	5	-4,-6	-	-	0.198	MINOR
ENSMUSG00000019865	Nmbr	ENSMUST00000188021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019865	Nmbr	ENSMUST00000186175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019865	Nmbr	ENSMUST00000020015	ENSMUSP00000020015	TRANSLATION	protein_coding	-	CCDS23707.1	1	390	0	3.7	6.4	183.7	10	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000019865	Nmbr	ENSMUST00000190114	ENSMUSP00000140754	TRANSLATION	protein_coding	-	-	3	141	0	1.35	0	40	3	0,-3	-	-	1.302	MINOR
ENSMUSG00000020308	Tpgs1	ENSMUST00000219585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020308	Tpgs1	ENSMUST00000239401	ENSMUSP00000159326	TRANSLATION	protein_coding	-	CCDS23982.1	-	303	0	0	3.9	0	0	-4,-2	-	-	1	PRINCIPAL:2
ENSMUSG00000020308	Tpgs1	ENSMUST00000020552	ENSMUSP00000020552	TRANSLATION	protein_coding	-	-	1	291	0	0	2.4	0	0	-4,-7	-	-	0.483	ALTERNATIVE:2
ENSMUSG00000020308	Tpgs1	ENSMUST00000220175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040195	Nemp1	ENSMUST00000124388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040195	Nemp1	ENSMUST00000133505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040195	Nemp1	ENSMUST00000048099	ENSMUSP00000045988	TRANSLATION	protein_coding	-	CCDS48720.1	1	437	0	0	1.5	306.8	6	-2,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000040195	Nemp1	ENSMUST00000142580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040195	Nemp1	ENSMUST00000118728	ENSMUSP00000113473	TRANSLATION	protein_coding	-	-	1	388	0	0	0	306.8	6	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000040195	Nemp1	ENSMUST00000118612	ENSMUSP00000113337	TRANSLATION	protein_coding	-	CCDS48721.1	1	325	0	0	0.5	203.7	6	-2,-5	-	-	0	MINOR
ENSMUSG00000023068	Nus1	ENSMUST00000218983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023068	Nus1	ENSMUST00000023830	ENSMUSP00000023830	TRANSLATION	protein_coding	-	CCDS23841.1	1	297	0	1.44	3.9	32	0	0,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000000290	Itgb2	ENSMUST00000156644	ENSMUSP00000137865	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0.75	0	33.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000290	Itgb2	ENSMUST00000131023	ENSMUSP00000119657	TRANSLATION	protein_coding	stop	-	3	54	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000290	Itgb2	ENSMUST00000153541	ENSMUSP00000137734	TRANSLATION	nonsense_mediated_decay	-	-	1	480	14	11.316	0	441.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000290	Itgb2	ENSMUST00000000299	ENSMUSP00000000299	TRANSLATION	protein_coding	-	CCDS23956.1	1	770	14	16.33	0.5	552.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000000290	Itgb2	ENSMUST00000130059	ENSMUSP00000118191	TRANSLATION	protein_coding	stop	-	3	130	7	3.75	0	138.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060181	Slc35e3	ENSMUST00000219482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060181	Slc35e3	ENSMUST00000079041	ENSMUSP00000078050	TRANSLATION	protein_coding	-	CCDS24195.1	1	313	0	0	6.3	67.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000039879	Heca	ENSMUST00000218758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039879	Heca	ENSMUST00000218268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039879	Heca	ENSMUST00000037879	ENSMUSP00000040707	TRANSLATION	protein_coding	-	CCDS23709.1	1	544	7	0	2.9	408.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039879	Heca	ENSMUST00000217949	ENSMUSP00000151692	TRANSLATION	protein_coding	start	-	1	133	4	0	0	187.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096442	Taar8a	ENSMUST00000051133	ENSMUSP00000062719	TRANSLATION	protein_coding	-	CCDS23745.1	-	344	0	0.6	5.1	188.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025432	Avil	ENSMUST00000142698	ENSMUSP00000117667	TRANSLATION	protein_coding	stop	-	5	54	2	1.68	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025432	Avil	ENSMUST00000026500	ENSMUSP00000026500	TRANSLATION	protein_coding	-	CCDS24221.1	1	819	3	17.26	7.5	374.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025432	Avil	ENSMUST00000126816	ENSMUSP00000115018	TRANSLATION	protein_coding	stop	-	5	78	3	2.43	0	45.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025432	Avil	ENSMUST00000129173	ENSMUSP00000123405	TRANSLATION	protein_coding	-	CCDS24221.1	5	819	3	17.26	7.5	374.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039497	Dse	ENSMUST00000217051	ENSMUSP00000150789	TRANSLATION	protein_coding	stop	-	5	353	0	2.22	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039497	Dse	ENSMUST00000216194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039497	Dse	ENSMUST00000215547	ENSMUSP00000149947	TRANSLATION	protein_coding	stop	-	3	181	0	0.84	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039497	Dse	ENSMUST00000216774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039497	Dse	ENSMUST00000048010	ENSMUSP00000040074	TRANSLATION	protein_coding	-	CCDS23776.1	1	958	0	2.46	8.3	0	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000040345	Arhgap9	ENSMUST00000218656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040345	Arhgap9	ENSMUST00000069548	ENSMUSP00000066455	TRANSLATION	protein_coding	-	CCDS36079.1	1	473	3	9	0.5	211.5	0	-4,-5	-	-	13.524	MINOR
ENSMUSG00000040345	Arhgap9	ENSMUST00000219026	ENSMUSP00000151574	TRANSLATION	protein_coding	-	CCDS36079.1	1	473	3	9	0.5	211.5	0	-4,-5	-	-	13.524	MINOR
ENSMUSG00000040345	Arhgap9	ENSMUST00000219511	ENSMUSP00000151690	TRANSLATION	protein_coding	-	-	1	648	3	9	0.5	236.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038522	Mfsd4b1	ENSMUST00000176975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038522	Mfsd4b1	ENSMUST00000163705	ENSMUSP00000128324	TRANSLATION	protein_coding	-	CCDS35884.2	1	425	0	0	0.5	51.2	0	-1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000038522	Mfsd4b1	ENSMUST00000239109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035863	Palm	ENSMUST00000046945	ENSMUSP00000040596	TRANSLATION	protein_coding	-	CCDS23991.1	1	383	0	0	3.9	410.9	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000035863	Palm	ENSMUST00000218924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035863	Palm	ENSMUST00000218857	ENSMUSP00000151964	TRANSLATION	protein_coding	stop	-	2	151	0	0	0	197.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035863	Palm	ENSMUST00000220365	ENSMUSP00000151929	TRANSLATION	protein_coding	stop	-	2	205	0	0	0	299.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035863	Palm	ENSMUST00000218631	ENSMUSP00000152010	TRANSLATION	protein_coding	-	-	2	176	0	0	0	67.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035863	Palm	ENSMUST00000105379	ENSMUSP00000101018	TRANSLATION	protein_coding	-	CCDS48621.1	1	339	0	0	2.9	235.5	0	-4,-5	-	-	0.655	MINOR
ENSMUSG00000035863	Palm	ENSMUST00000219711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035863	Palm	ENSMUST00000217759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036602	Alx1	ENSMUST00000040859	ENSMUSP00000042512	TRANSLATION	protein_coding	-	CCDS24155.1	1	326	0	2	13.8	120.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036602	Alx1	ENSMUST00000217946	ENSMUSP00000152017	TRANSLATION	protein_coding	-	-	5	377	0	2	0	120.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000036602	Alx1	ENSMUST00000218681	ENSMUSP00000151728	TRANSLATION	nonsense_mediated_decay	-	-	5	255	0	2	0	83.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036602	Alx1	ENSMUST00000164226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036602	Alx1	ENSMUST00000219194	ENSMUSP00000152018	TRANSLATION	protein_coding	-	CCDS24155.1	5	326	0	2	13.8	120.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036602	Alx1	ENSMUST00000218508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036602	Alx1	ENSMUST00000167156	ENSMUSP00000129230	TRANSLATION	protein_coding	-	CCDS24155.1	5	326	0	2	13.8	120.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036602	Alx1	ENSMUST00000218282	ENSMUSP00000151776	TRANSLATION	protein_coding	-	CCDS24155.1	5	326	0	2	13.8	120.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034758	Tle6	ENSMUST00000131530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000137631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000135008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000146239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034758	Tle6	ENSMUST00000134457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034758	Tle6	ENSMUST00000153379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034758	Tle6	ENSMUST00000149721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000127546	ENSMUSP00000114738	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034758	Tle6	ENSMUST00000151858	ENSMUSP00000119945	TRANSLATION	protein_coding	-	-	3	101	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000034758	Tle6	ENSMUST00000129282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000128278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034758	Tle6	ENSMUST00000124724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034758	Tle6	ENSMUST00000072020	ENSMUSP00000071905	TRANSLATION	protein_coding	-	CCDS24064.1	1	581	0	4.656	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000034758	Tle6	ENSMUST00000142948	ENSMUSP00000117287	TRANSLATION	protein_coding	-	CCDS83737.1	1	571	0	4.59	0.5	0	0	-4,-7	-	-	5.868	ALTERNATIVE:2
ENSMUSG00000090461	Iltifb	ENSMUST00000163808	ENSMUSP00000128415	TRANSLATION	protein_coding	-	CCDS48700.1	1	179	0	4.05	3.9	237.1	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000090461	Iltifb	ENSMUST00000179123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112600	Gm49918	ENSMUST00000220393	ENSMUSP00000151569	TRANSLATION	protein_coding	-	-	5	227	0	0	0	48	0	-4,-5	-	-	4.926	ALTERNATIVE:2
ENSMUSG00000112600	Gm49918	ENSMUST00000220062	ENSMUSP00000151479	TRANSLATION	protein_coding	-	-	-	240	0	0	0.5	58.5	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000038583	Pln	ENSMUST00000219921	ENSMUSP00000151860	TRANSLATION	protein_coding	-	CCDS35899.1	2	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038583	Pln	ENSMUST00000046221	ENSMUSP00000045709	TRANSLATION	protein_coding	-	CCDS35899.1	1	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038583	Pln	ENSMUST00000219491	ENSMUSP00000151641	TRANSLATION	protein_coding	-	CCDS35899.1	2	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038583	Pln	ENSMUST00000163319	ENSMUSP00000132743	TRANSLATION	protein_coding	-	CCDS35899.1	5	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038583	Pln	ENSMUST00000220197	ENSMUSP00000151966	TRANSLATION	protein_coding	-	CCDS35899.1	5	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038583	Pln	ENSMUST00000218468	ENSMUSP00000151745	TRANSLATION	protein_coding	-	CCDS35899.1	5	52	0	1	17	122.9	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000038160	Atg5	ENSMUST00000217412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038160	Atg5	ENSMUST00000039286	ENSMUSP00000044769	TRANSLATION	protein_coding	-	CCDS23824.1	1	275	0	6.75	16	207.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040653	Ppp1r14c	ENSMUST00000217573	ENSMUSP00000149688	TRANSLATION	protein_coding	-	-	1	125	0	0.85	0	44.1	0	-4,-6	-	-	4.356	MINOR
ENSMUSG00000040653	Ppp1r14c	ENSMUST00000043374	ENSMUSP00000045110	TRANSLATION	protein_coding	-	CCDS56669.1	1	164	0	1.78	5.1	119.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000034591	Slc41a2	ENSMUST00000139329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034591	Slc41a2	ENSMUST00000154926	ENSMUSP00000116482	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034591	Slc41a2	ENSMUST00000039956	ENSMUSP00000036690	TRANSLATION	protein_coding	-	CCDS24075.1	1	573	0	0	2.9	187.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034591	Slc41a2	ENSMUST00000154730	ENSMUSP00000123470	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034591	Slc41a2	ENSMUST00000126617	ENSMUSP00000115120	TRANSLATION	protein_coding	stop	-	2	89	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019467	Arhgef25	ENSMUST00000218478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019467	Arhgef25	ENSMUST00000220295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019467	Arhgef25	ENSMUST00000219649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019467	Arhgef25	ENSMUST00000222006	ENSMUSP00000152503	TRANSLATION	protein_coding	-	-	5	584	0	9.25	1.2	134.9	0	-4,-6	-	-	10.074	MINOR
ENSMUSG00000019467	Arhgef25	ENSMUST00000218864	ENSMUSP00000151801	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	0.95	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019467	Arhgef25	ENSMUST00000218654	ENSMUSP00000151325	TRANSLATION	protein_coding	-	-	5	579	0	10.25	5.3	134.9	0	-4,-2	-	-	13.564	ALTERNATIVE:1
ENSMUSG00000019467	Arhgef25	ENSMUST00000219245	ENSMUSP00000151876	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019467	Arhgef25	ENSMUST00000219428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019467	Arhgef25	ENSMUST00000218587	ENSMUSP00000151492	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019467	Arhgef25	ENSMUST00000019611	ENSMUSP00000019611	TRANSLATION	protein_coding	-	CCDS24231.1	1	618	0	10.25	6.5	134.9	0	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000019467	Arhgef25	ENSMUST00000219587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019467	Arhgef25	ENSMUST00000167353	ENSMUSP00000126339	TRANSLATION	protein_coding	-	CCDS48715.1	1	609	0	10.25	0.5	134.9	0	-4,-6	-	-	12	MINOR
ENSMUSG00000038214	Bend3	ENSMUST00000167488	ENSMUSP00000127351	TRANSLATION	protein_coding	-	CCDS35892.1	2	825	0	0	3.9	233.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000038214	Bend3	ENSMUST00000214116	ENSMUSP00000149839	TRANSLATION	protein_coding	stop	-	2	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038214	Bend3	ENSMUST00000216679	ENSMUSP00000150624	TRANSLATION	protein_coding	stop	-	5	159	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038214	Bend3	ENSMUST00000040147	ENSMUSP00000047251	TRANSLATION	protein_coding	-	CCDS35892.1	1	825	0	0	3.9	233.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000177438	ENSMUSP00000135774	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019876	Pkib	ENSMUST00000176354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019876	Pkib	ENSMUST00000177473	ENSMUSP00000135835	TRANSLATION	protein_coding	-	CCDS23855.1	3	78	0	1.56	6.3	96.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000176225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019876	Pkib	ENSMUST00000177325	ENSMUSP00000135280	TRANSLATION	protein_coding	-	CCDS23855.1	1	78	0	1.56	6.3	96.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000095668	ENSMUSP00000093329	TRANSLATION	protein_coding	-	CCDS23854.1	1	110	0	1.56	1.5	96.1	0	-4,-5	-	-	12.188	MINOR
ENSMUSG00000019876	Pkib	ENSMUST00000066028	ENSMUSP00000067532	TRANSLATION	protein_coding	-	CCDS23855.1	1	78	0	1.56	6.3	96.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000175852	ENSMUSP00000135666	TRANSLATION	protein_coding	-	CCDS23855.1	1	78	0	1.56	6.3	96.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000075992	ENSMUSP00000075374	TRANSLATION	protein_coding	-	CCDS23855.1	1	78	0	1.56	6.3	96.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019876	Pkib	ENSMUST00000177299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019876	Pkib	ENSMUST00000176741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059406	Tmprss9	ENSMUST00000105333	ENSMUSP00000100970	TRANSLATION	protein_coding	-	CCDS48641.1	1	1099	30	9.54	1.5	722.1	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000059406	Tmprss9	ENSMUST00000219742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059406	Tmprss9	ENSMUST00000219817	ENSMUSP00000152034	TRANSLATION	protein_coding	-	CCDS48641.1	5	1099	30	9.54	1.5	722.1	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000019773	Fbxo5	ENSMUST00000142200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019773	Fbxo5	ENSMUST00000019907	ENSMUSP00000019907	TRANSLATION	protein_coding	-	CCDS56683.1	1	421	8	4	0.5	23.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020180	Snrpd3	ENSMUST00000191097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020180	Snrpd3	ENSMUST00000020397	ENSMUSP00000020397	TRANSLATION	protein_coding	-	CCDS23926.1	1	126	0	3	17.5	57.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020180	Snrpd3	ENSMUST00000220229	ENSMUSP00000151655	TRANSLATION	protein_coding	-	-	3	84	0	1.65	0	38.6	0	-4,-5	-	-	7.344	MINOR
ENSMUSG00000035745	Grin3b	ENSMUST00000149148	ENSMUSP00000116887	TRANSLATION	protein_coding	start	-	1	542	12	5.9	0	190.6	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000035745	Grin3b	ENSMUST00000045085	ENSMUSP00000048576	TRANSLATION	protein_coding	-	CCDS24001.1	1	1003	12	6.82	1.5	190.6	4	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035745	Grin3b	ENSMUST00000131816	ENSMUSP00000122984	TRANSLATION	protein_coding	start/stop	-	1	399	7	3.55	0	74.8	1	-3,-6	-	-	-1	MINOR
ENSMUSG00000035242	Oaz1	ENSMUST00000179172	ENSMUSP00000136186	TRANSLATION	protein_coding	-	-	5	166	0	2.25	0	0	0	-4,-7	-	-	0.858	MINOR
ENSMUSG00000035242	Oaz1	ENSMUST00000060987	ENSMUSP00000055922	TRANSLATION	protein_coding	-	-	5	226	0	4.57	5.1	75.5	0	-4,-7	-	-	13.502	ALTERNATIVE:1
ENSMUSG00000035242	Oaz1	ENSMUST00000179894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035242	Oaz1	ENSMUST00000180036	ENSMUSP00000137400	TRANSLATION	protein_coding	-	CCDS56736.1	5	227	0	4.57	5.1	75.5	0	-4,-7	-	-	13.502	PRINCIPAL:2
ENSMUSG00000035242	Oaz1	ENSMUST00000177850	ENSMUSP00000136469	TRANSLATION	protein_coding	stop	-	5	210	0	4.24	0	73.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035242	Oaz1	ENSMUST00000179341	ENSMUSP00000136251	TRANSLATION	protein_coding	start	-	2	49	0	1.462	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035242	Oaz1	ENSMUST00000179620	ENSMUSP00000136134	TRANSLATION	protein_coding	stop	-	5	177	0	4.82	0	75.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000134930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019888	Mgat4c	ENSMUST00000130580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019888	Mgat4c	ENSMUST00000143640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019888	Mgat4c	ENSMUST00000146230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019888	Mgat4c	ENSMUST00000120748	ENSMUSP00000114010	TRANSLATION	protein_coding	-	CCDS24153.1	1	478	0	0	3.9	313.6	1	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000019888	Mgat4c	ENSMUST00000219683	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019888	Mgat4c	ENSMUST00000218984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019888	Mgat4c	ENSMUST00000020039	ENSMUSP00000020039	TRANSLATION	protein_coding	-	CCDS24153.1	1	478	0	0	3.9	313.6	1	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000019888	Mgat4c	ENSMUST00000218554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019888	Mgat4c	ENSMUST00000138016	ENSMUSP00000116902	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000127504	ENSMUSP00000117148	TRANSLATION	protein_coding	stop	-	5	59	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000138522	ENSMUSP00000118056	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	59.7	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000219195	ENSMUSP00000151859	TRANSLATION	protein_coding	stop	-	5	113	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000179929	ENSMUSP00000135959	TRANSLATION	protein_coding	-	CCDS24153.1	5	478	0	0	3.9	313.6	1	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000019888	Mgat4c	ENSMUST00000156751	ENSMUSP00000116216	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000019888	Mgat4c	ENSMUST00000163753	ENSMUSP00000131551	TRANSLATION	protein_coding	-	CCDS24153.1	3	478	0	0	3.9	313.6	1	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000020167	Tcf3	ENSMUST00000105340	ENSMUSP00000100977	TRANSLATION	protein_coding	-	CCDS48631.1	1	648	0	2.98	1.5	39.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000156990	ENSMUSP00000121172	TRANSLATION	protein_coding	start	-	5	638	0	2.65	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020167	Tcf3	ENSMUST00000105344	ENSMUSP00000100981	TRANSLATION	protein_coding	-	CCDS48635.1	1	650	0	2.98	1.5	39.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000105341	ENSMUSP00000100978	TRANSLATION	protein_coding	-	-	5	645	0	2.98	0.5	39.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000020379	ENSMUSP00000020379	TRANSLATION	protein_coding	-	CCDS48632.1	1	649	0	2.98	1.5	39.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000129027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020167	Tcf3	ENSMUST00000105343	ENSMUSP00000100980	TRANSLATION	protein_coding	-	CCDS48633.1	1	649	0	2.98	1.5	39.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000156244	ENSMUSP00000120303	TRANSLATION	protein_coding	stop	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020167	Tcf3	ENSMUST00000105342	ENSMUSP00000100979	TRANSLATION	protein_coding	-	CCDS48636.1	1	653	0	2.98	1.5	39.1	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000127931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020167	Tcf3	ENSMUST00000105345	ENSMUSP00000100982	TRANSLATION	protein_coding	-	CCDS24022.1	1	648	0	2.98	1.5	39.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020167	Tcf3	ENSMUST00000105339	ENSMUSP00000100976	TRANSLATION	protein_coding	-	-	5	648	0	2.98	0.5	39.1	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000020377	ENSMUSP00000020377	TRANSLATION	protein_coding	-	CCDS48634.1	5	652	0	2.98	1.5	39.1	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000020167	Tcf3	ENSMUST00000105346	ENSMUSP00000100983	TRANSLATION	protein_coding	-	CCDS48630.1	1	651	0	2.98	1.5	39.1	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000006345	Ggt1	ENSMUST00000155186	ENSMUSP00000123017	TRANSLATION	protein_coding	start	-	5	130	6	3.5	0	135.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000125770	ENSMUSP00000117968	TRANSLATION	protein_coding	stop	-	2	88	0	2.08	0	40.3	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000152657	ENSMUSP00000115818	TRANSLATION	protein_coding	stop	-	5	110	0	2.91	0	73.9	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000156487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006345	Ggt1	ENSMUST00000128886	ENSMUSP00000118261	TRANSLATION	protein_coding	stop	-	5	126	0	3.41	0	87	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000139459	ENSMUSP00000121774	TRANSLATION	protein_coding	stop	-	5	243	0	5.66	0	245.1	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000124259	ENSMUSP00000122616	TRANSLATION	protein_coding	stop	-	5	235	0	5.66	0	234.7	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000145928	ENSMUSP00000118852	TRANSLATION	protein_coding	stop	-	5	209	0	4.91	0	193	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000143226	ENSMUSP00000115115	TRANSLATION	protein_coding	stop	-	2	190	0	4.41	0	173.9	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000140219	ENSMUSP00000118870	TRANSLATION	protein_coding	stop	-	5	126	0	3.41	0	87	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000006508	ENSMUSP00000006508	TRANSLATION	protein_coding	-	CCDS23927.1	1	568	13	14.4	2.7	605.9	4	0,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006345	Ggt1	ENSMUST00000141062	ENSMUSP00000120686	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000131565	ENSMUSP00000119844	TRANSLATION	protein_coding	stop	-	5	126	0	3.41	0	87	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000129020	ENSMUSP00000118825	TRANSLATION	protein_coding	start/stop	-	5	263	0	6.58	0	287.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000129232	ENSMUSP00000115118	TRANSLATION	protein_coding	stop	-	3	189	0	4.41	0	173.3	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000134503	ENSMUSP00000121312	TRANSLATION	protein_coding	-	CCDS23927.1	1	568	13	14.4	2.7	605.9	4	0,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006345	Ggt1	ENSMUST00000145079	ENSMUSP00000115483	TRANSLATION	protein_coding	stop	-	5	110	0	2.91	0	73.9	4	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000151212	ENSMUSP00000119387	TRANSLATION	protein_coding	stop	-	5	60	0	1.33	0	0	3	0,-5	-	-	-1	MINOR
ENSMUSG00000006345	Ggt1	ENSMUST00000148447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006345	Ggt1	ENSMUST00000143792	ENSMUSP00000117851	TRANSLATION	protein_coding	stop	-	5	237	0	5.66	0	237.8	4	0,-5	-	-	-1	MINOR
ENSMUSG00000078348	Sf3b5	ENSMUST00000105139	ENSMUSP00000100771	TRANSLATION	protein_coding	-	CCDS35843.1	-	86	0	1	19.5	133.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009292	Trpm2	ENSMUST00000105400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009292	Trpm2	ENSMUST00000105399	ENSMUSP00000101038	TRANSLATION	protein_coding	-	-	1	109	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000009292	Trpm2	ENSMUST00000105401	ENSMUSP00000101040	TRANSLATION	protein_coding	-	CCDS48611.1	1	1506	0	4.23	1.5	71.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009292	Trpm2	ENSMUST00000153842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009292	Trpm2	ENSMUST00000154996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009292	Trpm2	ENSMUST00000217806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009292	Trpm2	ENSMUST00000138238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009292	Trpm2	ENSMUST00000126206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009292	Trpm2	ENSMUST00000219997	ENSMUSP00000151231	TRANSLATION	protein_coding	stop	-	2	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009292	Trpm2	ENSMUST00000140471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040134	Rdh7	ENSMUST00000130374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040134	Rdh7	ENSMUST00000047199	ENSMUSP00000039252	TRANSLATION	protein_coding	-	CCDS24255.1	1	316	27	2.2	1.5	132.7	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000049052	Olfr812	ENSMUST00000205013	ENSMUSP00000145482	TRANSLATION	protein_coding	-	CCDS24339.1	5	310	0	0.36	2.7	170	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049052	Olfr812	ENSMUST00000203571	ENSMUSP00000145284	TRANSLATION	protein_coding	-	CCDS24339.1	3	310	0	0.36	2.7	170	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049052	Olfr812	ENSMUST00000057775	ENSMUSP00000053359	TRANSLATION	protein_coding	-	CCDS24339.1	-	310	0	0.36	2.7	170	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052681	Rap1b	ENSMUST00000064667	ENSMUSP00000066238	TRANSLATION	protein_coding	-	CCDS24196.1	1	184	20	4.85	19.5	193	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000052681	Rap1b	ENSMUST00000220214	ENSMUSP00000151578	TRANSLATION	nonsense_mediated_decay	start	-	3	53	5	1.35	0	26	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009647	Mcu	ENSMUST00000161168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009647	Mcu	ENSMUST00000020312	ENSMUSP00000020312	TRANSLATION	protein_coding	-	CCDS23866.2	5	350	0	5.6	1.5	249.9	2	1,0	-	-	12	PRINCIPAL:1
ENSMUSG00000009647	Mcu	ENSMUST00000009791	ENSMUSP00000009791	TRANSLATION	protein_coding	-	-	1	201	0	3.55	0	229.7	2	-4,-7	-	-	6.69	MINOR
ENSMUSG00000009647	Mcu	ENSMUST00000162012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009647	Mcu	ENSMUST00000161435	ENSMUSP00000124087	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	0	1,0	-	-	-1	MINOR
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000070663	ENSMUSP00000069257	TRANSLATION	protein_coding	-	CCDS36052.1	1	1004	0	9.85	0.5	151.7	0	-4,-5	-	-	7.266	MINOR
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000219759	ENSMUSP00000151478	TRANSLATION	protein_coding	start	-	1	506	0	3.1	0	114.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000218773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000219559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000219653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000219263	ENSMUSP00000151842	TRANSLATION	protein_coding	-	-	5	1029	0	9.85	0.5	230.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000218161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019907	Ppp1r12a	ENSMUST00000219068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095075	Olfr782	ENSMUST00000077024	ENSMUSP00000076282	TRANSLATION	protein_coding	-	CCDS24315.1	-	314	0	0.42	7.6	164.6	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095075	Olfr782	ENSMUST00000213970	ENSMUSP00000150951	TRANSLATION	protein_coding	-	CCDS24315.1	5	314	0	0.42	7.6	164.6	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000069583	Krtap12-1	ENSMUST00000092370	ENSMUSP00000090024	TRANSLATION	protein_coding	-	CCDS23959.1	-	130	0	0	0.5	27.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049872	Calhm5	ENSMUST00000069125	ENSMUSP00000064462	TRANSLATION	protein_coding	-	CCDS35879.1	1	309	0	0	3.9	294.7	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000019923	Zwint	ENSMUST00000160337	ENSMUSP00000124429	TRANSLATION	protein_coding	-	CCDS23920.1	1	252	0	0	0.5	273.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019923	Zwint	ENSMUST00000163046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019923	Zwint	ENSMUST00000219352	ENSMUSP00000151725	TRANSLATION	protein_coding	start/stop	-	1	126	0	0	0	174.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019923	Zwint	ENSMUST00000105431	ENSMUSP00000101071	TRANSLATION	protein_coding	-	CCDS23920.1	1	252	0	0	0.5	273.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019923	Zwint	ENSMUST00000160128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019923	Zwint	ENSMUST00000020081	ENSMUSP00000020081	TRANSLATION	protein_coding	-	CCDS23920.1	1	252	0	0	0.5	273.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044025	Olfr790	ENSMUST00000215067	ENSMUSP00000149037	TRANSLATION	protein_coding	-	-	5	314	0	0.42	6.4	178.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044025	Olfr790	ENSMUST00000218901	ENSMUSP00000151759	TRANSLATION	protein_coding	-	CCDS24320.1	-	322	0	0.42	0.5	178.7	7	-4,-7	-	-	12	MINOR
ENSMUSG00000044025	Olfr790	ENSMUST00000056002	ENSMUSP00000052235	TRANSLATION	protein_coding	-	-	-	314	0	0.42	6.4	178.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044025	Olfr790	ENSMUST00000203966	ENSMUSP00000145450	TRANSLATION	protein_coding	-	-	5	314	0	0.42	6.4	178.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000108114	Olfr800	ENSMUST00000217094	ENSMUSP00000151047	TRANSLATION	protein_coding	-	CCDS24327.1	3	311	0	0.36	3.9	145.4	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000108114	Olfr800	ENSMUST00000104903	ENSMUSP00000100499	TRANSLATION	protein_coding	-	CCDS24327.1	-	311	0	0.36	3.9	145.4	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020003	Pex7	ENSMUST00000166511	ENSMUSP00000132996	TRANSLATION	protein_coding	-	CCDS48510.1	1	292	0	6.27	0.5	56.8	0	-4,-1	-	-	8.904	MINOR
ENSMUSG00000020003	Pex7	ENSMUST00000125942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020003	Pex7	ENSMUST00000020182	ENSMUSP00000020182	TRANSLATION	protein_coding	-	CCDS23720.1	1	318	0	6.87	1.5	83.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020003	Pex7	ENSMUST00000214951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000766	Oprm1	ENSMUST00000063036	ENSMUSP00000053498	TRANSLATION	protein_coding	-	CCDS78785.1	1	325	0	2.6	0.5	188	16	-4,-7	-	-	8.034	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000154941	ENSMUSP00000115413	TRANSLATION	nonsense_mediated_decay	-	-	1	337	0	3.6	0	200.8	18	-1,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105601	ENSMUSP00000101226	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	1.6	1.5	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000000783	ENSMUSP00000000783	TRANSLATION	protein_coding	-	-	1	425	0	4.2	0.5	200.8	18	-4,-5	-	-	12	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000143875	ENSMUSP00000123617	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105603	ENSMUSP00000101228	TRANSLATION	protein_coding	-	-	5	389	0	4.2	2.7	200.8	18	-4,-5	-	-	12.642	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105607	ENSMUSP00000101232	TRANSLATION	protein_coding	-	CCDS78787.1	1	398	0	4.2	6.3	200.8	18	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000000766	Oprm1	ENSMUST00000123861	ENSMUSP00000120187	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	1.6	1.5	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000092734	ENSMUSP00000090410	TRANSLATION	protein_coding	-	CCDS78787.1	1	398	0	4.2	6.3	200.8	18	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000000766	Oprm1	ENSMUST00000133486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000766	Oprm1	ENSMUST00000092731	ENSMUSP00000090407	TRANSLATION	protein_coding	-	-	1	392	0	4.2	0	200.8	18	-4,-5	-	-	12	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000148625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000766	Oprm1	ENSMUST00000150374	ENSMUSP00000114856	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000141897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000766	Oprm1	ENSMUST00000078634	ENSMUSP00000077704	TRANSLATION	protein_coding	-	-	1	456	0	4.2	0.5	200.8	18	-4,-5	-	-	12	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105605	ENSMUSP00000101230	TRANSLATION	protein_coding	-	CCDS83673.1	1	391	0	4.2	1.7	200.8	18	-4,-5	-	-	12.264	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000052751	ENSMUSP00000060329	TRANSLATION	protein_coding	-	CCDS78788.1	1	393	0	4.2	1.5	200.8	18	-4,-5	-	-	12.188	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000152674	ENSMUSP00000115552	TRANSLATION	protein_coding	-	-	3	104	0	1.6	0	0	2	-4,-5	-	-	0.798	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105611	ENSMUSP00000101236	TRANSLATION	protein_coding	-	CCDS56687.1	1	438	0	4.2	0.5	200.8	18	-4,-5	-	-	12	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000154906	ENSMUSP00000114342	TRANSLATION	protein_coding	-	CCDS83672.1	1	409	0	4.2	1.5	200.8	18	-4,-5	-	-	12.188	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105604	ENSMUSP00000101229	TRANSLATION	protein_coding	-	-	5	393	0	4.2	6.3	200.8	18	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000000766	Oprm1	ENSMUST00000105615	ENSMUSP00000101240	TRANSLATION	protein_coding	-	CCDS78784.1	1	370	0	2.6	0.5	188	16	-4,-7	-	-	8.034	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000129221	ENSMUSP00000123117	TRANSLATION	nonsense_mediated_decay	-	-	1	356	0	3.6	0	200.8	18	-1,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000144264	ENSMUSP00000115836	TRANSLATION	nonsense_mediated_decay	-	-	1	399	0	4.2	0	200.8	18	-4,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105597	ENSMUSP00000101222	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000135502	ENSMUSP00000135143	TRANSLATION	protein_coding	-	-	1	416	0	4.2	1.2	200.8	18	-4,-5	-	-	12.076	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000105602	ENSMUSP00000101227	TRANSLATION	protein_coding	-	CCDS83674.1	1	390	0	4.2	2.7	200.8	18	-4,-5	-	-	12.642	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000056385	ENSMUSP00000060590	TRANSLATION	protein_coding	-	CCDS78787.1	1	398	0	4.2	6.3	200.8	18	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000000766	Oprm1	ENSMUST00000092729	ENSMUSP00000090405	TRANSLATION	nonsense_mediated_decay	-	-	1	388	0	4.2	2.7	200.8	18	-4,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000129954	ENSMUSP00000122385	TRANSLATION	nonsense_mediated_decay	-	-	1	448	0	4.2	0	200.8	18	-4,-5	-	-	-1	MINOR
ENSMUSG00000000766	Oprm1	ENSMUST00000147171	ENSMUSP00000117950	TRANSLATION	nonsense_mediated_decay	-	-	5	330	0	2.6	0.5	188	16	-4,-7	-	-	-1	MINOR
ENSMUSG00000053420	Gm4792	ENSMUST00000065826	ENSMUSP00000068101	TRANSLATION	protein_coding	-	-	2	183	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000094076	Gm4767	ENSMUST00000188096	ENSMUSP00000139439	TRANSLATION	protein_coding	-	-	1	499	56	2.2	1.5	345.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094076	Gm4767	ENSMUST00000099439	ENSMUSP00000097038	TRANSLATION	protein_coding	start	-	5	498	56	2.2	1.5	345.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013833	Med16	ENSMUST00000163125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013833	Med16	ENSMUST00000105378	ENSMUSP00000101017	TRANSLATION	protein_coding	-	CCDS48623.1	1	864	4	1.06	1.5	447.1	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000013833	Med16	ENSMUST00000166964	ENSMUSP00000128463	TRANSLATION	protein_coding	stop	-	3	162	0	1.06	0	57.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013833	Med16	ENSMUST00000165684	ENSMUSP00000129375	TRANSLATION	protein_coding	-	CCDS23996.2	1	865	4	1.06	1.5	447.1	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000013833	Med16	ENSMUST00000170409	ENSMUSP00000126729	TRANSLATION	protein_coding	stop	-	3	104	0	0.66	0	27.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013833	Med16	ENSMUST00000170375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013833	Med16	ENSMUST00000164705	ENSMUSP00000129229	TRANSLATION	protein_coding	stop	-	3	172	0	0.66	0	101.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062074	Ccn6	ENSMUST00000076713	ENSMUSP00000076003	TRANSLATION	protein_coding	-	CCDS48537.1	5	354	3	0	1.5	69.1	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000020108	Ddit4	ENSMUST00000020308	ENSMUSP00000020308	TRANSLATION	protein_coding	-	CCDS23868.1	1	229	0	0.8	7.5	139	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000035798	Zdhhc17	ENSMUST00000218981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035798	Zdhhc17	ENSMUST00000219307	ENSMUSP00000151330	TRANSLATION	protein_coding	stop	-	3	82	0	2.25	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035798	Zdhhc17	ENSMUST00000041723	ENSMUSP00000043279	TRANSLATION	protein_coding	-	CCDS56748.1	1	632	2	7	6.6	262.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035798	Zdhhc17	ENSMUST00000217982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035798	Zdhhc17	ENSMUST00000218972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035798	Zdhhc17	ENSMUST00000099285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035798	Zdhhc17	ENSMUST00000218895	ENSMUSP00000151491	TRANSLATION	nonsense_mediated_decay	start	-	3	64	0	1.5	0	27.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035798	Zdhhc17	ENSMUST00000217793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035798	Zdhhc17	ENSMUST00000220247	ENSMUSP00000151754	TRANSLATION	nonsense_mediated_decay	start	-	1	192	0	4.5	0	85.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035798	Zdhhc17	ENSMUST00000217698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025389	Mip	ENSMUST00000026455	ENSMUSP00000026455	TRANSLATION	protein_coding	-	CCDS24265.1	1	263	0	3.75	11.5	267	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019815	Zc2hc1b	ENSMUST00000219970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019815	Zc2hc1b	ENSMUST00000019954	ENSMUSP00000019954	TRANSLATION	protein_coding	-	CCDS48502.1	1	172	3	0	1.5	51.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000019889	Ptprk	ENSMUST00000219107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019889	Ptprk	ENSMUST00000220357	ENSMUSP00000151493	TRANSLATION	protein_coding	start/stop	-	5	282	10	6.062	0	203.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019889	Ptprk	ENSMUST00000218633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019889	Ptprk	ENSMUST00000218584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019889	Ptprk	ENSMUST00000166468	ENSMUSP00000126279	TRANSLATION	protein_coding	-	CCDS35874.1	2	1457	21	25.25	3.9	719.7	1	1,-3	-	-	19	PRINCIPAL:2
ENSMUSG00000019889	Ptprk	ENSMUST00000219621	ENSMUSP00000151294	TRANSLATION	protein_coding	start	-	5	36	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019889	Ptprk	ENSMUST00000220404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019889	Ptprk	ENSMUST00000218359	ENSMUSP00000151986	TRANSLATION	protein_coding	-	-	1	1445	21	25.25	3.9	719.7	1	1,-3	-	-	19	ALTERNATIVE:2
ENSMUSG00000019889	Ptprk	ENSMUST00000218276	ENSMUSP00000151866	TRANSLATION	protein_coding	-	-	1	1471	21	25.25	3.9	719.7	1	1,-3	-	-	19	ALTERNATIVE:2
ENSMUSG00000019889	Ptprk	ENSMUST00000219478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019889	Ptprk	ENSMUST00000219761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058297	Spock2	ENSMUST00000121820	ENSMUSP00000113115	TRANSLATION	protein_coding	-	CCDS35910.1	1	423	6	1.27	1.7	214.7	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000058297	Spock2	ENSMUST00000138976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058297	Spock2	ENSMUST00000165024	ENSMUSP00000127155	TRANSLATION	protein_coding	-	-	5	423	6	1.27	1.7	214.7	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000001150	Mcm3ap	ENSMUST00000170795	ENSMUSP00000125960	TRANSLATION	protein_coding	-	CCDS23947.1	1	1971	0	6.5456	0.5	1974.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001150	Mcm3ap	ENSMUST00000219811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001150	Mcm3ap	ENSMUST00000220410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001150	Mcm3ap	ENSMUST00000218904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001150	Mcm3ap	ENSMUST00000218881	ENSMUSP00000151327	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0.5996	0	99.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001150	Mcm3ap	ENSMUST00000218361	ENSMUSP00000151973	TRANSLATION	protein_coding	start	-	3	116	0	0	0	100	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048240	Gng7	ENSMUST00000117805	ENSMUSP00000112409	TRANSLATION	protein_coding	-	-	1	68	0	2	19.5	64.4	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000048240	Gng7	ENSMUST00000118233	ENSMUSP00000114003	TRANSLATION	protein_coding	-	-	1	68	0	2	19.5	64.4	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000048240	Gng7	ENSMUST00000126317	ENSMUSP00000122735	TRANSLATION	protein_coding	stop	-	5	38	0	1.08	0	29.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048240	Gng7	ENSMUST00000118465	ENSMUSP00000113798	TRANSLATION	protein_coding	-	-	1	68	0	2	19.5	64.4	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000048240	Gng7	ENSMUST00000099462	ENSMUSP00000097061	TRANSLATION	protein_coding	-	CCDS24039.1	1	69	0	2	19.5	64.4	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000048240	Gng7	ENSMUST00000092285	ENSMUSP00000089936	TRANSLATION	protein_coding	-	CCDS24039.1	1	69	0	2	19.5	64.4	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000040021	Lats1	ENSMUST00000217931	ENSMUSP00000151533	TRANSLATION	protein_coding	-	CCDS48494.1	1	1129	21	3.12	5.1	240.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000040021	Lats1	ENSMUST00000165952	ENSMUSP00000132078	TRANSLATION	protein_coding	-	CCDS48494.1	1	1129	21	3.12	5.1	240.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000040021	Lats1	ENSMUST00000040043	ENSMUSP00000041915	TRANSLATION	protein_coding	-	CCDS48494.1	5	1129	21	3.12	5.1	240.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000020251	Glt8d2	ENSMUST00000150269	ENSMUSP00000115379	TRANSLATION	protein_coding	start	-	2	62	0	0.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020251	Glt8d2	ENSMUST00000155529	ENSMUSP00000134856	TRANSLATION	protein_coding	stop	-	5	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020251	Glt8d2	ENSMUST00000125505	ENSMUSP00000135897	TRANSLATION	nonsense_mediated_decay	-	-	3	47	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000020251	Glt8d2	ENSMUST00000128142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020251	Glt8d2	ENSMUST00000065815	ENSMUSP00000069188	TRANSLATION	protein_coding	-	-	1	363	2	1.82	0	133.8	0	-1,-5	-	-	11.763	MINOR
ENSMUSG00000020251	Glt8d2	ENSMUST00000140071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020251	Glt8d2	ENSMUST00000020485	ENSMUSP00000020485	TRANSLATION	protein_coding	-	CCDS24071.1	1	351	3	2.02	7.5	161.2	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000003070	Efna2	ENSMUST00000003154	ENSMUSP00000003154	TRANSLATION	protein_coding	-	CCDS24013.1	1	209	0	2.55	1.5	123.3	0	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056379	Taar1	ENSMUST00000051532	ENSMUSP00000049527	TRANSLATION	protein_coding	-	CCDS23735.1	-	332	0	0.8	1.5	203.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052012	Olfr796	ENSMUST00000214584	ENSMUSP00000150534	TRANSLATION	protein_coding	-	CCDS24324.1	2	310	0	0.2	6.3	168.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000052012	Olfr796	ENSMUST00000037071	ENSMUSP00000040207	TRANSLATION	protein_coding	-	CCDS24324.1	-	310	0	0.2	6.3	168.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020029	Nudt4	ENSMUST00000020217	ENSMUSP00000020217	TRANSLATION	protein_coding	-	CCDS24138.1	1	179	12	4.25	15	68.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000047626	Olfr791	ENSMUST00000217228	ENSMUSP00000150497	TRANSLATION	protein_coding	-	CCDS24321.1	5	312	0	0.36	7.6	151.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047626	Olfr791	ENSMUST00000057477	ENSMUSP00000052722	TRANSLATION	protein_coding	-	CCDS24321.1	-	312	0	0.36	7.6	151.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033255	Gm5134	ENSMUST00000134234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033255	Gm5134	ENSMUST00000099577	ENSMUSP00000097172	TRANSLATION	protein_coding	-	CCDS35940.2	1	671	0	5.71	0.5	390.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000112039	Gm5136	ENSMUST00000218023	ENSMUSP00000151516	TRANSLATION	protein_coding	-	-	-	291	3	0.7	2.7	142	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000063457	Rps15	ENSMUST00000068408	ENSMUSP00000069004	TRANSLATION	protein_coding	-	CCDS35978.1	1	145	0	2.75	15	137.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063457	Rps15	ENSMUST00000062674	ENSMUSP00000100997	TRANSLATION	protein_coding	-	CCDS78858.1	1	118	0	2	2.5	137.6	0	-4,-2	-	-	10.79	MINOR
ENSMUSG00000096546	Smlr1	ENSMUST00000179685	ENSMUSP00000136316	TRANSLATION	protein_coding	-	CCDS56698.1	1	66	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000096546	Smlr1	ENSMUST00000187490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019768	Esr1	ENSMUST00000105589	ENSMUSP00000101214	TRANSLATION	protein_coding	-	CCDS56678.1	1	599	30	5	5.1	511.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000019768	Esr1	ENSMUST00000127145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019768	Esr1	ENSMUST00000127934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019768	Esr1	ENSMUST00000149195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019768	Esr1	ENSMUST00000105590	ENSMUSP00000101215	TRANSLATION	protein_coding	-	CCDS56678.1	1	599	30	5	5.1	511.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000019768	Esr1	ENSMUST00000067086	ENSMUSP00000070070	TRANSLATION	protein_coding	-	CCDS56678.1	1	599	30	5	5.1	511.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000019768	Esr1	ENSMUST00000105588	ENSMUSP00000101213	TRANSLATION	protein_coding	-	-	5	499	24	2	0.5	378	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000019768	Esr1	ENSMUST00000133985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019768	Esr1	ENSMUST00000138828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019768	Esr1	ENSMUST00000137012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069584	Gm10272	ENSMUST00000092371	ENSMUSP00000090025	TRANSLATION	protein_coding	-	-	-	110	0	0	1	37.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050198	Olfr768	ENSMUST00000216212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050198	Olfr768	ENSMUST00000216681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050198	Olfr768	ENSMUST00000063031	ENSMUSP00000089619	TRANSLATION	protein_coding	-	CCDS24305.1	-	312	0	0.42	5.2	168.7	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033416	Gucd1	ENSMUST00000153125	ENSMUSP00000117061	TRANSLATION	protein_coding	start	-	1	115	0	0	0	110.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000129307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033416	Gucd1	ENSMUST00000147269	ENSMUSP00000118894	TRANSLATION	protein_coding	stop	-	2	135	0	0	0	174	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000136763	ENSMUSP00000114435	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	33.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000123505	ENSMUSP00000117292	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	122.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000039796	ENSMUSP00000043000	TRANSLATION	protein_coding	-	CCDS35936.1	1	239	0	0	10.8	311.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000033416	Gucd1	ENSMUST00000145890	ENSMUSP00000123254	TRANSLATION	nonsense_mediated_decay	-	-	1	211	0	0	0	266	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000219774	ENSMUSP00000151443	TRANSLATION	protein_coding	-	-	3	209	0	0	0	144.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000118936	ENSMUSP00000113976	TRANSLATION	protein_coding	-	CCDS83713.1	1	200	0	0	3.7	271.1	0	-4,-5	-	-	4.398	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000138122	ENSMUSP00000119821	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033416	Gucd1	ENSMUST00000128419	ENSMUSP00000121405	TRANSLATION	protein_coding	start/stop	-	5	160	0	0	0	195.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020211	Sf3a2	ENSMUST00000147440	ENSMUSP00000116478	TRANSLATION	protein_coding	stop	-	5	67	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020211	Sf3a2	ENSMUST00000148665	ENSMUSP00000117160	TRANSLATION	protein_coding	-	CCDS35986.2	1	485	4	0	0.5	160.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020211	Sf3a2	ENSMUST00000139461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020211	Sf3a2	ENSMUST00000151928	ENSMUSP00000114164	TRANSLATION	protein_coding	-	-	5	194	4	0	0.5	126.6	0	-4,-5	-	-	7.966	MINOR
ENSMUSG00000020052	Ascl1	ENSMUST00000020243	ENSMUSP00000020243	TRANSLATION	protein_coding	-	CCDS24101.1	1	231	0	0.2	1.5	60.1	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000044537	Olfr779	ENSMUST00000222301	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000044537	Olfr779	ENSMUST00000069063	ENSMUSP00000089616	TRANSLATION	protein_coding	stop	-	-	130	0	0.2	0	95.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000040415	Dtx3	ENSMUST00000116229	ENSMUSP00000111937	TRANSLATION	protein_coding	-	-	1	395	8	1.48	0.5	45.4	0	-4,-2	-	-	15.984	MINOR
ENSMUSG00000040415	Dtx3	ENSMUST00000130855	ENSMUSP00000114776	TRANSLATION	protein_coding	-	-	5	350	8	2.23	6.3	45.4	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000040415	Dtx3	ENSMUST00000038217	ENSMUSP00000044627	TRANSLATION	protein_coding	-	CCDS36078.1	1	347	8	2.23	6.3	45.4	0	-4,-2	-	-	20	PRINCIPAL:2
ENSMUSG00000040415	Dtx3	ENSMUST00000137151	ENSMUSP00000115302	TRANSLATION	protein_coding	-	-	3	34	0	0.75	0	0	0	-4,-5	-	-	2.016	MINOR
ENSMUSG00000040415	Dtx3	ENSMUST00000125254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040415	Dtx3	ENSMUST00000144322	ENSMUSP00000116510	TRANSLATION	protein_coding	stop	-	3	116	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000098188	Sowahc	ENSMUST00000182161	ENSMUSP00000138351	TRANSLATION	protein_coding	-	CCDS59544.1	-	512	0	0	0.5	49	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078453	Abracl	ENSMUST00000220433	ENSMUSP00000151794	TRANSLATION	protein_coding	stop	-	5	57	0	1.75	0	66	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078453	Abracl	ENSMUST00000218994	ENSMUSP00000151461	TRANSLATION	protein_coding	-	CCDS48506.1	2	81	0	2.5	19.5	102	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078453	Abracl	ENSMUST00000220110	ENSMUSP00000151841	TRANSLATION	protein_coding	-	CCDS48506.1	1	81	0	2.5	19.5	102	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078453	Abracl	ENSMUST00000020002	ENSMUSP00000020002	TRANSLATION	protein_coding	-	CCDS48506.1	1	81	0	2.5	19.5	102	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078453	Abracl	ENSMUST00000217718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052798	Nup107	ENSMUST00000218777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052798	Nup107	ENSMUST00000167943	ENSMUSP00000129546	TRANSLATION	protein_coding	-	-	1	924	0	24.33	7.5	714.9	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000052798	Nup107	ENSMUST00000220323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052798	Nup107	ENSMUST00000220203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052798	Nup107	ENSMUST00000218810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052798	Nup107	ENSMUST00000218375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052798	Nup107	ENSMUST00000218576	ENSMUSP00000151757	TRANSLATION	nonsense_mediated_decay	-	-	1	336	0	8.75	0	73.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052798	Nup107	ENSMUST00000064848	ENSMUSP00000063590	TRANSLATION	protein_coding	-	CCDS36068.1	1	926	0	24.33	7.5	714.9	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000060187	Lrrc10	ENSMUST00000073834	ENSMUSP00000073502	TRANSLATION	protein_coding	-	CCDS24189.1	-	274	0	0.6	2.9	42.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035529	Prdm4	ENSMUST00000218289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035529	Prdm4	ENSMUST00000218743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035529	Prdm4	ENSMUST00000037646	ENSMUSP00000041942	TRANSLATION	protein_coding	-	-	1	796	27	5.75	4.8	48.3	0	-4,-6	-	-	18.604	ALTERNATIVE:1
ENSMUSG00000035529	Prdm4	ENSMUST00000218969	ENSMUSP00000151593	TRANSLATION	protein_coding	stop	-	2	153	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035529	Prdm4	ENSMUST00000220032	ENSMUSP00000151931	TRANSLATION	protein_coding	-	CCDS24093.1	5	803	27	5.948	1.5	48.3	0	-4,-6	-	-	18.132	PRINCIPAL:2
ENSMUSG00000035529	Prdm4	ENSMUST00000219112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035529	Prdm4	ENSMUST00000219370	ENSMUSP00000151513	TRANSLATION	nonsense_mediated_decay	-	-	1	120	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015312	Gadd45b	ENSMUST00000220246	ENSMUSP00000151426	TRANSLATION	protein_coding	-	-	2	145	0	2.8	0	66.4	0	-4,-7	-	-	10.998	MINOR
ENSMUSG00000015312	Gadd45b	ENSMUST00000219449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015312	Gadd45b	ENSMUST00000015456	ENSMUSP00000015456	TRANSLATION	protein_coding	-	CCDS24038.1	1	160	0	3.3	7.5	66.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051346	Spryd4	ENSMUST00000061995	ENSMUSP00000054731	TRANSLATION	protein_coding	-	CCDS24264.1	1	207	0	0.75	7.5	35.6	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000107748	Olfr766-ps1	ENSMUST00000204515	ENSMUSP00000154204	TRANSLATION	protein_coding	-	-	5	325	0	0.42	0	174	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025383	Il23a	ENSMUST00000026449	ENSMUSP00000026449	TRANSLATION	protein_coding	-	CCDS24270.1	1	196	0	4	1.5	315.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025383	Il23a	ENSMUST00000218109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037747	Phyhipl	ENSMUST00000162793	ENSMUSP00000124655	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037747	Phyhipl	ENSMUST00000161687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037747	Phyhipl	ENSMUST00000162470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037747	Phyhipl	ENSMUST00000159025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037747	Phyhipl	ENSMUST00000162251	ENSMUSP00000125179	TRANSLATION	protein_coding	-	CCDS48593.1	3	330	0	0	18.2	29.8	0	-4,-5	-	-	10	ALTERNATIVE:1
ENSMUSG00000037747	Phyhipl	ENSMUST00000160127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037747	Phyhipl	ENSMUST00000162144	ENSMUSP00000124828	TRANSLATION	protein_coding	start/stop	-	3	212	0	0	0	29.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037747	Phyhipl	ENSMUST00000046513	ENSMUSP00000045807	TRANSLATION	protein_coding	-	CCDS23914.1	1	375	0	0	14.2	29.8	0	-4,-5	-	-	9.068	PRINCIPAL:3
ENSMUSG00000037747	Phyhipl	ENSMUST00000162571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037747	Phyhipl	ENSMUST00000163054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020048	Hsp90b1	ENSMUST00000129178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020048	Hsp90b1	ENSMUST00000129413	ENSMUSP00000122710	TRANSLATION	protein_coding	start/stop	-	5	373	0	7.25	0	542.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020048	Hsp90b1	ENSMUST00000134515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020048	Hsp90b1	ENSMUST00000146897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020048	Hsp90b1	ENSMUST00000020238	ENSMUSP00000020238	TRANSLATION	protein_coding	-	CCDS36019.1	1	802	9	13.73	2.9	813.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000054452	Tle5	ENSMUST00000218690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000218432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000220368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000002518	ENSMUSP00000002518	TRANSLATION	protein_coding	-	CCDS24062.1	1	197	0	4.53	11.8	240.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000054452	Tle5	ENSMUST00000218611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000217807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000218574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000220348	ENSMUSP00000151523	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	2.25	0	144.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054452	Tle5	ENSMUST00000219870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054452	Tle5	ENSMUST00000220282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034994	Eef2	ENSMUST00000219497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034994	Eef2	ENSMUST00000047864	ENSMUSP00000046101	TRANSLATION	protein_coding	-	CCDS35993.1	1	858	12	12.2	17.5	511.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034994	Eef2	ENSMUST00000219943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047139	Cd24a	ENSMUST00000214532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047139	Cd24a	ENSMUST00000058714	ENSMUSP00000057983	TRANSLATION	protein_coding	-	CCDS23821.1	1	76	0	0	1.5	79.3	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000047139	Cd24a	ENSMUST00000214476	ENSMUSP00000148921	TRANSLATION	protein_coding	-	-	3	98	0	0	0	79.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000044770	Scml4	ENSMUST00000130511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044770	Scml4	ENSMUST00000105494	ENSMUSP00000101133	TRANSLATION	protein_coding	-	-	1	350	0	3.92	0.5	170.2	0	-4,-5	-	-	8.814	MINOR
ENSMUSG00000044770	Scml4	ENSMUST00000125576	ENSMUSP00000118910	TRANSLATION	protein_coding	stop	-	3	224	0	2.32	0	165.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000044770	Scml4	ENSMUST00000127675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044770	Scml4	ENSMUST00000063063	ENSMUSP00000053157	TRANSLATION	protein_coding	-	CCDS23816.1	1	408	0	3.92	0.5	223.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000044770	Scml4	ENSMUST00000136841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044770	Scml4	ENSMUST00000105495	ENSMUSP00000101134	TRANSLATION	protein_coding	-	-	1	177	0	1.32	0	123.1	0	-4,0	-	-	0.798	MINOR
ENSMUSG00000044770	Scml4	ENSMUST00000157071	ENSMUSP00000122585	TRANSLATION	protein_coding	stop	-	3	94	0	1	0	60.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000044770	Scml4	ENSMUST00000153091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059134	Olfr814	ENSMUST00000216966	ENSMUSP00000150458	TRANSLATION	protein_coding	-	CCDS24341.1	5	310	0	0.42	7.6	159	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000059134	Olfr814	ENSMUST00000213742	ENSMUSP00000150716	TRANSLATION	protein_coding	-	CCDS24341.1	5	310	0	0.42	7.6	159	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000059134	Olfr814	ENSMUST00000081367	ENSMUSP00000080106	TRANSLATION	protein_coding	-	CCDS24341.1	-	310	0	0.42	7.6	159	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047417	Rexo1	ENSMUST00000057910	ENSMUSP00000049705	TRANSLATION	protein_coding	-	CCDS24025.1	1	1213	14	1.985	0.5	234	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000047417	Rexo1	ENSMUST00000182604	ENSMUSP00000158646	TRANSLATION	protein_coding	-	-	1	536	14	1.985	0	227.4	0	-4,-1	-	-	17.604	ALTERNATIVE:2
ENSMUSG00000047417	Rexo1	ENSMUST00000183233	ENSMUSP00000158752	TRANSLATION	protein_coding	-	-	1	529	14	1.985	0	234	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000047417	Rexo1	ENSMUST00000183160	ENSMUSP00000138616	TRANSLATION	nonsense_mediated_decay	start	-	3	93	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047417	Rexo1	ENSMUST00000183139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047417	Rexo1	ENSMUST00000182260	ENSMUSP00000138493	TRANSLATION	protein_coding	start	-	1	536	14	1.985	0	227.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000047417	Rexo1	ENSMUST00000183073	ENSMUSP00000138329	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047417	Rexo1	ENSMUST00000182682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059762	Olfr767	ENSMUST00000213579	ENSMUSP00000150151	TRANSLATION	protein_coding	-	CCDS24304.1	5	309	0	0.42	8.8	167	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059762	Olfr767	ENSMUST00000082131	ENSMUSP00000080775	TRANSLATION	protein_coding	-	CCDS24304.1	-	309	0	0.42	8.8	167	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039835	Nhsl1	ENSMUST00000162891	ENSMUSP00000124072	TRANSLATION	protein_coding	stop	-	2	943	0	0	0	812.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039835	Nhsl1	ENSMUST00000037341	ENSMUSP00000040799	TRANSLATION	protein_coding	-	CCDS35853.1	5	1587	0	0	0.5	812.1	0	-4,-2	-	-	6	MINOR
ENSMUSG00000039835	Nhsl1	ENSMUST00000159299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039835	Nhsl1	ENSMUST00000207038	ENSMUSP00000147021	TRANSLATION	protein_coding	-	-	5	1617	0	0.56	0.5	812.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039835	Nhsl1	ENSMUST00000100054	ENSMUSP00000097631	TRANSLATION	protein_coding	-	CCDS48508.1	5	1583	0	0	0.5	812.1	0	-4,-7	-	-	6	MINOR
ENSMUSG00000039835	Nhsl1	ENSMUST00000160602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039835	Nhsl1	ENSMUST00000160600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039835	Nhsl1	ENSMUST00000160547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039835	Nhsl1	ENSMUST00000161510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112148	Lilrb4a	ENSMUST00000220402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000219175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000218753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000220226	ENSMUSP00000151303	TRANSLATION	protein_coding	stop	-	5	25	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112148	Lilrb4a	ENSMUST00000078778	ENSMUSP00000077833	TRANSLATION	protein_coding	-	CCDS23832.1	1	335	0	3.1	0.5	64.7	2	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000112148	Lilrb4a	ENSMUST00000217705	ENSMUSP00000151225	TRANSLATION	protein_coding	-	-	1	240	0	1.6	0	32.5	2	2,-2	-	-	6.012	MINOR
ENSMUSG00000112148	Lilrb4a	ENSMUST00000219848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000219388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000220166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000218617	ENSMUSP00000151580	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000112148	Lilrb4a	ENSMUST00000218217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000219029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112148	Lilrb4a	ENSMUST00000220182	ENSMUSP00000151694	TRANSLATION	protein_coding	-	-	1	296	0	3.1	0	64.7	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000112148	Lilrb4a	ENSMUST00000218340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097878	Gm8764	ENSMUST00000181166	ENSMUSP00000138007	TRANSLATION	protein_coding	stop	-	3	146	0	1	0	61.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000097878	Gm8764	ENSMUST00000181179	ENSMUSP00000137930	TRANSLATION	protein_coding	-	CCDS78891.1	2	264	0	1.2	0.5	96.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095483	Olfr776	ENSMUST00000073704	ENSMUSP00000073383	TRANSLATION	protein_coding	-	CCDS24311.1	-	312	0	0.28	7.5	168.2	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095483	Olfr776	ENSMUST00000213512	ENSMUSP00000150656	TRANSLATION	protein_coding	-	CCDS24311.1	5	312	0	0.28	7.5	168.2	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051236	Msrb3	ENSMUST00000139961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051236	Msrb3	ENSMUST00000092143	ENSMUSP00000089781	TRANSLATION	protein_coding	-	CCDS24208.1	1	186	9	4.015	5.7	181.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000051236	Msrb3	ENSMUST00000130950	ENSMUSP00000115269	TRANSLATION	protein_coding	-	-	3	114	7	2.135	0	92.6	0	-4,-2	-	-	7.554	MINOR
ENSMUSG00000019863	Qrsl1	ENSMUST00000154405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019863	Qrsl1	ENSMUST00000216786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019863	Qrsl1	ENSMUST00000217541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019863	Qrsl1	ENSMUST00000146937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019863	Qrsl1	ENSMUST00000020012	ENSMUSP00000020012	TRANSLATION	protein_coding	-	CCDS35894.1	1	525	16	8.424	1.5	425.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000073427	Gm4924	ENSMUST00000211078	ENSMUSP00000147561	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	1.6	0	85.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073427	Gm4924	ENSMUST00000211099	ENSMUSP00000147929	TRANSLATION	protein_coding	-	-	1	68	0	1.6	1.5	85.3	0	-4,-5	-	-	3.426	MINOR
ENSMUSG00000073427	Gm4924	ENSMUST00000210381	ENSMUSP00000147402	TRANSLATION	protein_coding	-	-	2	966	72	2.8	0	428.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073427	Gm4924	ENSMUST00000165906	ENSMUSP00000131819	TRANSLATION	protein_coding	start	-	-	225	24	1	0	133.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073427	Gm4924	ENSMUST00000210025	ENSMUSP00000148243	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	1.6	1.5	85.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035311	Gnptab	ENSMUST00000020251	ENSMUSP00000020251	TRANSLATION	protein_coding	-	CCDS24110.1	1	1235	5	4.97	0.5	428	2	-3,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000035311	Gnptab	ENSMUST00000155306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035311	Gnptab	ENSMUST00000130301	ENSMUSP00000120643	TRANSLATION	protein_coding	stop	-	5	166	0	1	0	45.1	2	0,-5	-	-	-1	MINOR
ENSMUSG00000035311	Gnptab	ENSMUST00000151273	ENSMUSP00000118025	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	1	-3,-7	-	-	-1	MINOR
ENSMUSG00000035311	Gnptab	ENSMUST00000127615	ENSMUSP00000116915	TRANSLATION	protein_coding	stop	-	2	174	0	1.5	0	45.1	1	3,-2	-	-	-1	MINOR
ENSMUSG00000035311	Gnptab	ENSMUST00000132738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035311	Gnptab	ENSMUST00000141343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034748	Sirt6	ENSMUST00000042923	ENSMUSP00000048971	TRANSLATION	protein_coding	-	CCDS24066.1	1	334	33	8.05	1.5	89.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034748	Sirt6	ENSMUST00000119324	ENSMUSP00000113953	TRANSLATION	protein_coding	-	CCDS48645.1	1	294	33	6.8	0.5	89.8	0	-3,-5	-	-	15.498	MINOR
ENSMUSG00000034748	Sirt6	ENSMUST00000126477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034748	Sirt6	ENSMUST00000143424	ENSMUSP00000118238	TRANSLATION	protein_coding	stop	-	5	64	12	1.75	0	29.6	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000035697	Arhgap45	ENSMUST00000105373	ENSMUSP00000101012	TRANSLATION	protein_coding	-	CCDS83725.1	1	1127	8	7.82	0.5	169	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000035697	Arhgap45	ENSMUST00000150022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035697	Arhgap45	ENSMUST00000099501	ENSMUSP00000097100	TRANSLATION	protein_coding	-	CCDS48624.1	1	1116	8	7.82	1.5	169	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000035697	Arhgap45	ENSMUST00000043311	ENSMUSP00000041019	TRANSLATION	protein_coding	-	CCDS24005.1	1	1000	8	7.82	1.5	169	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000035697	Arhgap45	ENSMUST00000140974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015202	Cnksr3	ENSMUST00000015346	ENSMUSP00000015346	TRANSLATION	protein_coding	-	CCDS56690.1	1	555	0	2.66	11.6	557.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000015202	Cnksr3	ENSMUST00000150282	ENSMUSP00000115863	TRANSLATION	protein_coding	-	-	1	314	0	0.8	0	338.5	0	-4,-5	-	-	1.806	MINOR
ENSMUSG00000044475	Ascc1	ENSMUST00000050516	ENSMUSP00000052351	TRANSLATION	protein_coding	-	CCDS23870.1	1	356	0	0	3.9	231.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000044475	Ascc1	ENSMUST00000164083	ENSMUSP00000126301	TRANSLATION	protein_coding	-	CCDS23870.1	1	356	0	0	3.9	231.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000044475	Ascc1	ENSMUST00000219778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025352	Gdf11	ENSMUST00000026408	ENSMUSP00000026408	TRANSLATION	protein_coding	-	CCDS24296.1	1	405	0	1.64	2.7	235.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020226	Slc5a4b	ENSMUST00000120757	ENSMUSP00000113582	TRANSLATION	protein_coding	-	CCDS48603.1	1	660	0	7.02	2.7	536.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000014498	Ankrd52	ENSMUST00000014642	ENSMUSP00000014642	TRANSLATION	protein_coding	-	CCDS24274.1	1	1076	0	18.735	6.3	501.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000014498	Ankrd52	ENSMUST00000167990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014498	Ankrd52	ENSMUST00000166577	ENSMUSP00000128794	TRANSLATION	protein_coding	start	-	3	188	0	3.6	0	71.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045555	Mettl24	ENSMUST00000058747	ENSMUSP00000049997	TRANSLATION	protein_coding	-	CCDS23799.1	1	363	0	0	1.5	22	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000019989	Enpp3	ENSMUST00000219968	ENSMUSP00000151646	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019989	Enpp3	ENSMUST00000217903	ENSMUSP00000152033	TRANSLATION	nonsense_mediated_decay	start	-	5	140	4	2.25	0	74.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000019989	Enpp3	ENSMUST00000218343	ENSMUSP00000151540	TRANSLATION	nonsense_mediated_decay	start	-	1	281	1	5.826	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019989	Enpp3	ENSMUST00000219861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019989	Enpp3	ENSMUST00000220209	ENSMUSP00000151518	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019989	Enpp3	ENSMUST00000218044	ENSMUSP00000151393	TRANSLATION	protein_coding	-	-	1	195	5	4.278	0	74.3	2	-4,-7	-	-	0	MINOR
ENSMUSG00000019989	Enpp3	ENSMUST00000218619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019989	Enpp3	ENSMUST00000020169	ENSMUSP00000020169	TRANSLATION	protein_coding	-	CCDS23752.1	1	874	19	20.004	5.1	387.5	2	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000019989	Enpp3	ENSMUST00000219342	ENSMUSP00000151371	TRANSLATION	protein_coding	stop	-	3	64	4	2	0	93.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019984	Med23	ENSMUST00000177232	ENSMUSP00000134866	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	0	0	23.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019984	Med23	ENSMUST00000177175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019984	Med23	ENSMUST00000175786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019984	Med23	ENSMUST00000177522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019984	Med23	ENSMUST00000176285	ENSMUSP00000135232	TRANSLATION	protein_coding	start	-	5	1010	0	0	0	1470.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019984	Med23	ENSMUST00000176313	ENSMUSP00000135751	TRANSLATION	protein_coding	stop	-	2	197	0	0	0	210.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019984	Med23	ENSMUST00000176827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019984	Med23	ENSMUST00000020159	ENSMUSP00000020159	TRANSLATION	protein_coding	-	CCDS35871.2	1	1370	0	0	9.7	2047	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000019984	Med23	ENSMUST00000176502	ENSMUSP00000134836	TRANSLATION	protein_coding	start/stop	-	3	234	0	0	0	222.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019984	Med23	ENSMUST00000092646	ENSMUSP00000090316	TRANSLATION	protein_coding	-	CCDS48522.1	1	1376	0	0	9.7	2035	0	-4,-5	-	-	8.28	ALTERNATIVE:1
ENSMUSG00000000731	Aire	ENSMUST00000148469	ENSMUSP00000118317	TRANSLATION	protein_coding	-	CCDS70059.1	1	405	9	1.905	1.5	149.2	0	-4,-7	-	-	8.424	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000131028	ENSMUSP00000114808	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	0	0	40	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000143548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000731	Aire	ENSMUST00000140636	ENSMUSP00000121477	TRANSLATION	protein_coding	-	CCDS70056.1	1	404	9	1.905	1.5	149.2	0	-4,-7	-	-	8.424	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000105395	ENSMUSP00000101034	TRANSLATION	protein_coding	-	CCDS70054.1	1	409	9	1.905	1.5	149.2	0	-4,-7	-	-	8.424	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000143452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000731	Aire	ENSMUST00000019257	ENSMUSP00000019257	TRANSLATION	protein_coding	-	CCDS70053.1	1	551	17	4.025	1.5	149.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000145975	ENSMUSP00000120150	TRANSLATION	protein_coding	-	CCDS70060.1	1	548	17	4.025	1.5	149.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000143735	ENSMUSP00000123678	TRANSLATION	nonsense_mediated_decay	-	-	1	317	0	0.105	0	113.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000128241	ENSMUSP00000114904	TRANSLATION	protein_coding	-	CCDS23961.1	1	552	17	4.025	1.5	149.2	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000000731	Aire	ENSMUST00000156417	ENSMUSP00000115162	TRANSLATION	protein_coding	-	CCDS70051.1	1	408	9	1.905	1.5	149.2	0	-4,-7	-	-	8.424	MINOR
ENSMUSG00000000731	Aire	ENSMUST00000155021	ENSMUSP00000122190	TRANSLATION	protein_coding	-	CCDS70057.1	1	488	17	3.705	0.5	149.2	0	-4,-7	-	-	17.358	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000105396	ENSMUSP00000101035	TRANSLATION	protein_coding	-	CCDS70052.1	1	492	17	3.705	0.5	149.2	0	-4,-7	-	-	17.358	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000130972	ENSMUSP00000122659	TRANSLATION	protein_coding	-	CCDS70058.1	1	547	17	4.025	1.5	149.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000154374	ENSMUSP00000117094	TRANSLATION	protein_coding	-	CCDS70055.1	1	493	17	3.705	0.5	149.2	0	-4,-7	-	-	17.358	ALTERNATIVE:2
ENSMUSG00000000731	Aire	ENSMUST00000141255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034127	Tspan8	ENSMUST00000080630	ENSMUSP00000079463	TRANSLATION	protein_coding	-	CCDS24181.1	1	235	0	3.4	1.5	169.8	4	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034127	Tspan8	ENSMUST00000179196	ENSMUSP00000136645	TRANSLATION	protein_coding	-	CCDS24181.1	1	235	0	3.4	1.5	169.8	4	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034127	Tspan8	ENSMUST00000217900	ENSMUSP00000151525	TRANSLATION	protein_coding	stop	-	2	83	0	2.05	0	74.2	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000034127	Tspan8	ENSMUST00000035563	ENSMUSP00000049243	TRANSLATION	protein_coding	-	CCDS24181.1	1	235	0	3.4	1.5	169.8	4	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000006764	Tph2	ENSMUST00000006949	ENSMUSP00000006949	TRANSLATION	protein_coding	-	CCDS36061.1	1	488	15	9.45	2.9	577.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000006764	Tph2	ENSMUST00000155794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025353	Ormdl2	ENSMUST00000219524	ENSMUSP00000151697	TRANSLATION	protein_coding	-	CCDS24295.1	2	153	0	0	19.5	182	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000025353	Ormdl2	ENSMUST00000217685	ENSMUSP00000151644	TRANSLATION	protein_coding	-	-	1	94	0	0	0	121.4	0	-4,-6	-	-	2.364	MINOR
ENSMUSG00000025353	Ormdl2	ENSMUST00000219215	ENSMUSP00000151335	TRANSLATION	protein_coding	-	CCDS24295.1	1	153	0	0	19.5	182	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000025353	Ormdl2	ENSMUST00000026409	ENSMUSP00000026409	TRANSLATION	protein_coding	-	CCDS24295.1	1	153	0	0	19.5	182	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000020069	Hnrnph3	ENSMUST00000118898	ENSMUSP00000112424	TRANSLATION	protein_coding	-	CCDS83704.1	5	331	0	5.6	6.5	75.6	0	-4,-5	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000020069	Hnrnph3	ENSMUST00000119814	ENSMUSP00000113134	TRANSLATION	protein_coding	-	-	1	71	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020069	Hnrnph3	ENSMUST00000143689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020069	Hnrnph3	ENSMUST00000020263	ENSMUSP00000020263	TRANSLATION	protein_coding	-	CCDS48583.1	5	346	0	5.6	7.5	75.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000020069	Hnrnph3	ENSMUST00000140743	ENSMUSP00000118444	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020069	Hnrnph3	ENSMUST00000141616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025364	Pa2g4	ENSMUST00000131728	ENSMUSP00000114434	TRANSLATION	protein_coding	-	CCDS24282.1	1	394	0	10.5	7.5	90.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025364	Pa2g4	ENSMUST00000147068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025364	Pa2g4	ENSMUST00000026425	ENSMUSP00000026425	TRANSLATION	protein_coding	-	CCDS24282.1	1	394	0	10.5	7.5	90.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038302	Afg1l	ENSMUST00000133326	ENSMUSP00000123510	TRANSLATION	nonsense_mediated_decay	-	-	1	279	7	0	0	215.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038302	Afg1l	ENSMUST00000041024	ENSMUSP00000036149	TRANSLATION	protein_coding	-	CCDS23811.1	1	480	7	0	5.1	356.3	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000038302	Afg1l	ENSMUST00000149832	ENSMUSP00000119620	TRANSLATION	nonsense_mediated_decay	start	-	5	80	0	0	0	91.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038302	Afg1l	ENSMUST00000151747	ENSMUSP00000120389	TRANSLATION	protein_coding	start	-	2	348	7	0	0	317	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064181	Rab3ip	ENSMUST00000219109	ENSMUSP00000151708	TRANSLATION	protein_coding	-	-	1	460	0	7.8	5.1	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000064181	Rab3ip	ENSMUST00000020375	ENSMUSP00000020375	TRANSLATION	protein_coding	-	CCDS24186.1	1	428	0	6.8	1.5	0	0	-4,-5	-	-	4.246	MINOR
ENSMUSG00000064181	Rab3ip	ENSMUST00000218391	ENSMUSP00000151778	TRANSLATION	protein_coding	stop	-	2	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064181	Rab3ip	ENSMUST00000219603	ENSMUSP00000151326	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064181	Rab3ip	ENSMUST00000219570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092210	A930009A15Rik	ENSMUST00000173620	ENSMUSP00000134099	TRANSLATION	protein_coding	-	CCDS56749.1	1	118	5	0	0.5	0	0	-4,-2	-	-	5	PRINCIPAL:1
ENSMUSG00000020234	4930404N11Rik	ENSMUST00000020456	ENSMUSP00000020456	TRANSLATION	protein_coding	-	CCDS24056.1	1	206	0	0	1.5	340.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020234	4930404N11Rik	ENSMUST00000124512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020234	4930404N11Rik	ENSMUST00000130762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020234	4930404N11Rik	ENSMUST00000131736	ENSMUSP00000123068	TRANSLATION	protein_coding	start	-	1	145	0	0	0	148.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000220301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020186	Csrp2	ENSMUST00000220409	ENSMUSP00000151913	TRANSLATION	protein_coding	-	-	2	197	15	4.41	0	107.5	0	-4,-6	-	-	15.444	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000220054	ENSMUSP00000151538	TRANSLATION	protein_coding	stop	-	2	136	10	3.33	0	52.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000219840	ENSMUSP00000151547	TRANSLATION	non_stop_decay	stop	-	2	59	4	1	0	23.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000219502	ENSMUSP00000151276	TRANSLATION	protein_coding	-	-	3	114	8	2.33	0	52.2	0	-4,-6	-	-	3.3	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000219188	ENSMUSP00000151746	TRANSLATION	protein_coding	stop	-	3	84	8	2	0	52.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020186	Csrp2	ENSMUST00000020403	ENSMUSP00000020403	TRANSLATION	protein_coding	-	CCDS24165.1	1	193	16	5.16	17.3	114	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025436	Atp23	ENSMUST00000026504	ENSMUSP00000026504	TRANSLATION	protein_coding	-	CCDS24220.1	1	201	3	0	0.5	136	0	-4,-5	-	-	5.736	MINOR
ENSMUSG00000025436	Atp23	ENSMUST00000220051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025436	Atp23	ENSMUST00000168520	ENSMUSP00000128382	TRANSLATION	protein_coding	-	CCDS48710.1	1	246	3	0	0.5	190.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000048756	Foxo3	ENSMUST00000105502	ENSMUSP00000101141	TRANSLATION	protein_coding	-	CCDS23810.1	1	672	0	1.9	5.1	272.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048756	Foxo3	ENSMUST00000175881	ENSMUSP00000135380	TRANSLATION	protein_coding	-	CCDS23810.1	1	672	0	1.9	5.1	272.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048756	Foxo3	ENSMUST00000177542	ENSMUSP00000135355	TRANSLATION	protein_coding	stop	-	3	103	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048756	Foxo3	ENSMUST00000105501	ENSMUSP00000101140	TRANSLATION	protein_coding	-	-	1	244	0	0.6	0	42	0	-4,-5	-	-	1.896	MINOR
ENSMUSG00000048756	Foxo3	ENSMUST00000056974	ENSMUSP00000050683	TRANSLATION	protein_coding	-	CCDS23810.1	1	672	0	1.9	5.1	272.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045559	Olfr827	ENSMUST00000216253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045559	Olfr827	ENSMUST00000213568	ENSMUSP00000149200	TRANSLATION	protein_coding	-	CCDS24352.1	5	322	0	0.28	1.5	178.5	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045559	Olfr827	ENSMUST00000058123	ENSMUSP00000089609	TRANSLATION	protein_coding	-	CCDS24352.1	-	322	0	0.28	1.5	178.5	4	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020178	Adora2a	ENSMUST00000219322	ENSMUSP00000152012	TRANSLATION	protein_coding	stop	-	3	23	0	0.5	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000020178	Adora2a	ENSMUST00000217703	ENSMUSP00000151245	TRANSLATION	protein_coding	stop	-	2	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020178	Adora2a	ENSMUST00000105420	ENSMUSP00000101060	TRANSLATION	protein_coding	-	CCDS23924.1	3	410	0	3.5	1.5	205.8	7	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020178	Adora2a	ENSMUST00000219044	ENSMUSP00000151503	TRANSLATION	protein_coding	stop	-	3	84	0	1.75	0	44.9	2	3,-2	-	-	-1	MINOR
ENSMUSG00000028630	Dyrk2	ENSMUST00000218692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028630	Dyrk2	ENSMUST00000218477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000028630	Dyrk2	ENSMUST00000004281	ENSMUSP00000004281	TRANSLATION	protein_coding	-	CCDS24201.1	1	599	18	1	6.5	196.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000075000	Nrbf2	ENSMUST00000077839	ENSMUSP00000097254	TRANSLATION	protein_coding	-	CCDS23902.1	1	287	0	1.94	7.5	486	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000075000	Nrbf2	ENSMUST00000159002	ENSMUSP00000125678	TRANSLATION	protein_coding	-	-	3	60	0	1.08	0	74.9	0	-4,-6	-	-	3.342	MINOR
ENSMUSG00000004939	Nmrk2	ENSMUST00000005069	ENSMUSP00000005069	TRANSLATION	protein_coding	-	CCDS24046.1	1	195	8	5.03	2.9	58.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096747	Olfr823	ENSMUST00000213145	ENSMUSP00000150794	TRANSLATION	protein_coding	-	CCDS24348.1	5	315	0	0.2	1.5	183.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096747	Olfr823	ENSMUST00000081469	ENSMUSP00000080189	TRANSLATION	protein_coding	-	CCDS24348.1	-	315	0	0.2	1.5	183.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000015501	Hivep2	ENSMUST00000185392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015501	Hivep2	ENSMUST00000191138	ENSMUSP00000140150	TRANSLATION	protein_coding	-	CCDS23704.1	1	2430	15	1.8	0.5	83.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015501	Hivep2	ENSMUST00000187083	ENSMUSP00000140290	TRANSLATION	protein_coding	-	CCDS23704.1	1	2430	15	1.8	0.5	83.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015501	Hivep2	ENSMUST00000015645	ENSMUSP00000015645	TRANSLATION	protein_coding	-	CCDS23704.1	1	2430	15	1.8	0.5	83.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015501	Hivep2	ENSMUST00000191464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015501	Hivep2	ENSMUST00000186989	ENSMUSP00000140180	TRANSLATION	protein_coding	stop	-	1	373	8	0	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034917	Tjp3	ENSMUST00000219479	ENSMUSP00000151601	TRANSLATION	protein_coding	-	CCDS24051.1	1	904	0	13	0.5	239.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034917	Tjp3	ENSMUST00000218966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034917	Tjp3	ENSMUST00000218484	ENSMUSP00000151819	TRANSLATION	protein_coding	stop	-	2	169	0	2.2	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034917	Tjp3	ENSMUST00000218520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034917	Tjp3	ENSMUST00000219958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034917	Tjp3	ENSMUST00000045744	ENSMUSP00000036438	TRANSLATION	protein_coding	-	CCDS24051.1	1	904	0	13	0.5	239.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069708	Taar3	ENSMUST00000045152	ENSMUSP00000036817	TRANSLATION	protein_coding	-	CCDS23736.1	-	343	0	0.48	5.2	175	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000078429	Ctdsp2	ENSMUST00000217738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078429	Ctdsp2	ENSMUST00000219917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078429	Ctdsp2	ENSMUST00000105256	ENSMUSP00000100891	TRANSLATION	protein_coding	-	CCDS48711.1	1	270	10	4.5	6.5	179	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000078429	Ctdsp2	ENSMUST00000105255	ENSMUSP00000100890	TRANSLATION	protein_coding	-	CCDS36076.1	1	119	6	2.5	2.8	120.8	0	-4,-7	-	-	8.496	MINOR
ENSMUSG00000033105	Lss	ENSMUST00000048678	ENSMUSP00000046856	TRANSLATION	protein_coding	-	CCDS23948.1	1	733	10	18.58	5.1	134.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000033105	Lss	ENSMUST00000160671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033105	Lss	ENSMUST00000159013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033105	Lss	ENSMUST00000159172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033105	Lss	ENSMUST00000162475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033105	Lss	ENSMUST00000163049	ENSMUSP00000125575	TRANSLATION	protein_coding	start	-	3	29	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033105	Lss	ENSMUST00000162282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033105	Lss	ENSMUST00000162848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020125	Elane	ENSMUST00000046091	ENSMUSP00000038925	TRANSLATION	protein_coding	-	CCDS23994.1	1	265	14	4	0.5	201.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000044499	Hs3st5	ENSMUST00000167191	ENSMUSP00000130778	TRANSLATION	protein_coding	-	CCDS35881.1	1	346	18	1	17	122.1	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044499	Hs3st5	ENSMUST00000171521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044499	Hs3st5	ENSMUST00000168572	ENSMUSP00000129434	TRANSLATION	protein_coding	-	CCDS35881.1	1	346	18	1	17	122.1	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044499	Hs3st5	ENSMUST00000058738	ENSMUSP00000060229	TRANSLATION	protein_coding	-	CCDS35881.1	1	346	18	1	17	122.1	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044499	Hs3st5	ENSMUST00000172357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037440	Vnn1	ENSMUST00000219254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037440	Vnn1	ENSMUST00000041416	ENSMUSP00000040599	TRANSLATION	protein_coding	-	CCDS35868.1	1	512	3	7	1.5	61.4	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000107822	Olfr1358	ENSMUST00000204477	ENSMUSP00000154751	TRANSLATION	protein_coding	-	-	-	318	0	0.36	0	174.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069668	Sult3a1	ENSMUST00000092597	ENSMUSP00000090259	TRANSLATION	protein_coding	-	CCDS23771.1	5	293	19	5.6	0.5	266.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069668	Sult3a1	ENSMUST00000218204	ENSMUSP00000151228	TRANSLATION	protein_coding	-	CCDS23771.1	1	293	19	5.6	0.5	266.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019873	Reep3	ENSMUST00000218920	ENSMUSP00000151490	TRANSLATION	protein_coding	start	-	3	25	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019873	Reep3	ENSMUST00000219431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019873	Reep3	ENSMUST00000217841	ENSMUSP00000151994	TRANSLATION	protein_coding	-	-	1	267	0	0	0.5	93.4	3	-1,-6	-	-	6	MINOR
ENSMUSG00000019873	Reep3	ENSMUST00000020023	ENSMUSP00000020023	TRANSLATION	protein_coding	-	CCDS35926.1	1	254	0	0	6.3	93.4	3	-1,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000097704	Gm26741	ENSMUST00000180473	ENSMUSP00000137700	TRANSLATION	protein_coding	start	-	-	28	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000020027	Socs2	ENSMUST00000128363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020027	Socs2	ENSMUST00000134918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020027	Socs2	ENSMUST00000128854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020027	Socs2	ENSMUST00000170690	ENSMUSP00000129331	TRANSLATION	protein_coding	-	CCDS24136.1	3	198	0	2.96	8.8	88.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020027	Socs2	ENSMUST00000155148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020027	Socs2	ENSMUST00000172070	ENSMUSP00000131875	TRANSLATION	protein_coding	-	CCDS24136.1	2	198	0	2.96	8.8	88.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020027	Socs2	ENSMUST00000150432	ENSMUSP00000117785	TRANSLATION	protein_coding	stop	-	2	70	0	1.63	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020027	Socs2	ENSMUST00000139210	ENSMUSP00000121305	TRANSLATION	nonsense_mediated_decay	start	-	1	201	0	2.16	0	88.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020027	Socs2	ENSMUST00000129942	ENSMUSP00000117576	TRANSLATION	protein_coding	stop	-	3	62	0	1.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020027	Socs2	ENSMUST00000119917	ENSMUSP00000113378	TRANSLATION	protein_coding	-	CCDS24136.1	1	198	0	2.96	8.8	88.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020027	Socs2	ENSMUST00000135822	ENSMUSP00000118720	TRANSLATION	protein_coding	stop	-	3	80	0	1.96	0	29.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020027	Socs2	ENSMUST00000145847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020027	Socs2	ENSMUST00000130784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020027	Socs2	ENSMUST00000020215	ENSMUSP00000020215	TRANSLATION	protein_coding	-	CCDS24136.1	1	198	0	2.96	8.8	88.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000112129	Pbld1	ENSMUST00000178684	ENSMUSP00000136589	TRANSLATION	protein_coding	-	CCDS23895.1	1	288	0	6.098	7.1	0	0	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000112129	Pbld1	ENSMUST00000219204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112129	Pbld1	ENSMUST00000219687	ENSMUSP00000151373	TRANSLATION	protein_coding	-	-	1	69	0	0.75	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000112129	Pbld1	ENSMUST00000020266	ENSMUSP00000020266	TRANSLATION	protein_coding	-	-	5	289	0	6.098	7.1	0	0	-4,-6	-	-	9	ALTERNATIVE:1
ENSMUSG00000112129	Pbld1	ENSMUST00000219829	ENSMUSP00000151721	TRANSLATION	protein_coding	start	-	3	132	0	1.598	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112129	Pbld1	ENSMUST00000219045	ENSMUSP00000151357	TRANSLATION	protein_coding	-	-	1	37	0	0.75	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000112129	Pbld1	ENSMUST00000218401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063216	Olfr1351	ENSMUST00000216030	ENSMUSP00000149241	TRANSLATION	protein_coding	-	CCDS23974.1	3	319	0	0.36	1.5	166.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063216	Olfr1351	ENSMUST00000080730	ENSMUSP00000079555	TRANSLATION	protein_coding	-	CCDS23974.1	-	319	0	0.36	1.5	166.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020229	Slc5a4a	ENSMUST00000020450	ENSMUSP00000020450	TRANSLATION	protein_coding	-	CCDS35941.1	2	656	0	6.72	0.5	528.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025408	Ddit3	ENSMUST00000026475	ENSMUSP00000026475	TRANSLATION	protein_coding	-	CCDS24236.1	1	168	0	0	5.1	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000025408	Ddit3	ENSMUST00000139091	ENSMUSP00000118339	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025408	Ddit3	ENSMUST00000134686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096481	Gm3250	ENSMUST00000167358	ENSMUSP00000132276	TRANSLATION	protein_coding	-	-	-	230	0	0	0.5	53.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020198	Ap3d1	ENSMUST00000218125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020198	Ap3d1	ENSMUST00000220183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020198	Ap3d1	ENSMUST00000219253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020198	Ap3d1	ENSMUST00000219356	ENSMUSP00000151355	TRANSLATION	nonsense_mediated_decay	start	-	3	122	0	2.513	0	92.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020198	Ap3d1	ENSMUST00000020420	ENSMUSP00000020420	TRANSLATION	protein_coding	-	CCDS35984.1	1	1199	0	9.375	0.5	667	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020198	Ap3d1	ENSMUST00000219816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020198	Ap3d1	ENSMUST00000218610	ENSMUSP00000151820	TRANSLATION	nonsense_mediated_decay	start	-	3	116	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095002	Olfr798	ENSMUST00000204979	ENSMUSP00000144716	TRANSLATION	protein_coding	-	CCDS24325.1	2	311	0	0.36	6.4	175.5	5	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095002	Olfr798	ENSMUST00000079810	ENSMUSP00000078739	TRANSLATION	protein_coding	-	CCDS24325.1	-	311	0	0.36	6.4	175.5	5	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000112252	Gm32802	ENSMUST00000219565	ENSMUSP00000151607	TRANSLATION	protein_coding	-	-	-	802	0	1	15	346.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047631	Apof	ENSMUST00000050901	ENSMUSP00000050300	TRANSLATION	protein_coding	-	-	1	315	0	0	0	302.7	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000047631	Apof	ENSMUST00000238970	ENSMUSP00000158988	TRANSLATION	protein_coding	-	CCDS24268.1	-	326	0	0	0.5	302.7	0	-1,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000037608	Bclaf1	ENSMUST00000191438	ENSMUSP00000140702	TRANSLATION	nonsense_mediated_decay	start	-	1	583	0	0	0	460.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037608	Bclaf1	ENSMUST00000043881	ENSMUSP00000043583	TRANSLATION	protein_coding	-	CCDS35858.1	1	919	9	0	0.5	607.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000037608	Bclaf1	ENSMUST00000190156	ENSMUSP00000140428	TRANSLATION	nonsense_mediated_decay	-	-	1	748	9	0	0	607.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037608	Bclaf1	ENSMUST00000187338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037608	Bclaf1	ENSMUST00000216560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037608	Bclaf1	ENSMUST00000191143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037608	Bclaf1	ENSMUST00000188546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037608	Bclaf1	ENSMUST00000186100	ENSMUSP00000140101	TRANSLATION	nonsense_mediated_decay	-	-	1	750	9	0	0.5	607.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037608	Bclaf1	ENSMUST00000185800	ENSMUSP00000140623	TRANSLATION	protein_coding	-	CCDS78798.1	1	917	9	0	0.5	607.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000037608	Bclaf1	ENSMUST00000189158	ENSMUSP00000140608	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037608	Bclaf1	ENSMUST00000092678	ENSMUSP00000090349	TRANSLATION	protein_coding	-	CCDS23721.1	1	870	9	0	0.5	607.7	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000037608	Bclaf1	ENSMUST00000215262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000131828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000148009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000136259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000128487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000151435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019790	Stxbp5	ENSMUST00000139199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000219200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000141722	ENSMUSP00000123253	TRANSLATION	protein_coding	-	CCDS35837.2	5	1116	0	4.36	7.5	130.1	0	-4,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000019790	Stxbp5	ENSMUST00000136324	ENSMUSP00000123355	TRANSLATION	protein_coding	start/stop	-	3	263	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019790	Stxbp5	ENSMUST00000139779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019790	Stxbp5	ENSMUST00000125200	ENSMUSP00000121507	TRANSLATION	protein_coding	-	-	5	1099	0	4.36	1.5	130.1	0	-4,-2	-	-	12.231	MINOR
ENSMUSG00000019790	Stxbp5	ENSMUST00000038213	ENSMUSP00000044535	TRANSLATION	protein_coding	-	-	5	1152	0	4.36	7.5	130.1	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000025396	Hsd17b6	ENSMUST00000026462	ENSMUSP00000026462	TRANSLATION	protein_coding	-	CCDS24257.1	5	317	27	3.7	1.5	131.2	0	-2,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025396	Hsd17b6	ENSMUST00000219707	ENSMUSP00000151807	TRANSLATION	protein_coding	stop	-	3	136	14	2.1	0	56.5	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000025396	Hsd17b6	ENSMUST00000219447	ENSMUSP00000151556	TRANSLATION	protein_coding	-	CCDS24257.1	1	317	27	3.7	1.5	131.2	0	-2,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025396	Hsd17b6	ENSMUST00000219183	ENSMUSP00000151661	TRANSLATION	protein_coding	-	CCDS24257.1	1	317	27	3.7	1.5	131.2	0	-2,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025396	Hsd17b6	ENSMUST00000219780	ENSMUSP00000151670	TRANSLATION	protein_coding	stop	-	3	56	5	0	0	0	0	-1,-7	-	-	-1	MINOR
ENSMUSG00000025396	Hsd17b6	ENSMUST00000219953	ENSMUSP00000151374	TRANSLATION	protein_coding	stop	-	3	101	10	1.2	0	36.9	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000060843	Ctnna3	ENSMUST00000075099	ENSMUSP00000074606	TRANSLATION	protein_coding	-	CCDS23901.1	5	895	0	15.71	8.3	576.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060843	Ctnna3	ENSMUST00000105441	ENSMUSP00000101081	TRANSLATION	protein_coding	-	CCDS23901.1	1	895	0	15.71	8.3	576.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060843	Ctnna3	ENSMUST00000105440	ENSMUSP00000101080	TRANSLATION	protein_coding	-	CCDS23901.1	1	895	0	15.71	8.3	576.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060843	Ctnna3	ENSMUST00000133190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060843	Ctnna3	ENSMUST00000135474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035383	Pmch	ENSMUST00000048621	ENSMUSP00000044352	TRANSLATION	protein_coding	-	CCDS24105.1	1	165	0	0	7.5	159.1	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000025362	Rps26	ENSMUST00000219773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025362	Rps26	ENSMUST00000219591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025362	Rps26	ENSMUST00000026420	ENSMUSP00000026420	TRANSLATION	protein_coding	-	CCDS36090.1	1	115	3	2.33	21.5	184	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000061904	Slc25a3	ENSMUST00000164505	ENSMUSP00000132480	TRANSLATION	protein_coding	-	CCDS24121.1	5	357	0	2.16	3.9	165.3	2	-4,-2	-	-	13	PRINCIPAL:2
ENSMUSG00000061904	Slc25a3	ENSMUST00000167455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061904	Slc25a3	ENSMUST00000076694	ENSMUSP00000075987	TRANSLATION	protein_coding	-	CCDS24121.1	1	357	0	2.16	3.9	165.3	2	-4,-2	-	-	13	PRINCIPAL:2
ENSMUSG00000061904	Slc25a3	ENSMUST00000163246	ENSMUSP00000129301	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000061904	Slc25a3	ENSMUST00000170810	ENSMUSP00000127098	TRANSLATION	protein_coding	-	-	5	358	0	2.16	3.9	163.6	2	-4,-1	-	-	12.898	ALTERNATIVE:2
ENSMUSG00000061904	Slc25a3	ENSMUST00000171960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061904	Slc25a3	ENSMUST00000169339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061904	Slc25a3	ENSMUST00000172442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074802	Gas2l3	ENSMUST00000220071	ENSMUSP00000151992	TRANSLATION	protein_coding	stop	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074802	Gas2l3	ENSMUST00000220128	ENSMUSP00000151240	TRANSLATION	protein_coding	-	-	1	368	4	3	0.5	143.6	0	-4,-6	-	-	16	ALTERNATIVE:2
ENSMUSG00000074802	Gas2l3	ENSMUST00000105298	ENSMUSP00000100935	TRANSLATION	protein_coding	-	CCDS24115.1	1	683	4	3	0.5	143.6	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000074802	Gas2l3	ENSMUST00000219073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074802	Gas2l3	ENSMUST00000219351	ENSMUSP00000151247	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074802	Gas2l3	ENSMUST00000099374	ENSMUSP00000096973	TRANSLATION	protein_coding	-	CCDS24115.1	1	683	4	3	0.5	143.6	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000074802	Gas2l3	ENSMUST00000218764	ENSMUSP00000151428	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074802	Gas2l3	ENSMUST00000220234	ENSMUSP00000151238	TRANSLATION	protein_coding	stop	-	2	199	0	1.3	0	51.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038510	Rpf2	ENSMUST00000183114	ENSMUSP00000138750	TRANSLATION	protein_coding	stop	-	3	153	0	3.35	0	76.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038510	Rpf2	ENSMUST00000183309	ENSMUSP00000138581	TRANSLATION	protein_coding	-	CCDS59543.1	1	306	0	7.164	9.5	153.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000038510	Rpf2	ENSMUST00000045114	ENSMUSP00000035456	TRANSLATION	protein_coding	-	CCDS35885.1	1	273	0	6.414	1.7	153.2	0	-4,-6	-	-	10.746	MINOR
ENSMUSG00000038510	Rpf2	ENSMUST00000182287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038510	Rpf2	ENSMUST00000183052	ENSMUSP00000138646	TRANSLATION	protein_coding	stop	-	3	205	0	4.914	0	73	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038510	Rpf2	ENSMUST00000181995	ENSMUSP00000138425	TRANSLATION	protein_coding	stop	-	3	257	0	6.114	0	129.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078439	Smim24	ENSMUST00000118206	ENSMUSP00000113817	TRANSLATION	protein_coding	-	-	1	72	0	0	0	61.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078439	Smim24	ENSMUST00000129083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078439	Smim24	ENSMUST00000105322	ENSMUSP00000100959	TRANSLATION	protein_coding	-	CCDS35998.1	1	120	0	0	1.5	162.3	0	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039031	Arhgap18	ENSMUST00000039557	ENSMUSP00000044834	TRANSLATION	protein_coding	-	CCDS23757.1	1	663	0	3.54	1.5	141.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039031	Arhgap18	ENSMUST00000142284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039031	Arhgap18	ENSMUST00000176060	ENSMUSP00000135030	TRANSLATION	protein_coding	stop	-	3	190	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039031	Arhgap18	ENSMUST00000135866	ENSMUSP00000135783	TRANSLATION	protein_coding	stop	-	2	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039031	Arhgap18	ENSMUST00000220012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033126	Ybey	ENSMUST00000049185	ENSMUSP00000045647	TRANSLATION	protein_coding	-	CCDS23946.1	1	164	3	1.56	6.4	0	0	-4,0	-	-	11	PRINCIPAL:1
ENSMUSG00000033126	Ybey	ENSMUST00000218564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019878	Hsf2	ENSMUST00000079833	ENSMUSP00000078761	TRANSLATION	protein_coding	-	CCDS23852.1	1	517	0	3.28	2.7	296.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019878	Hsf2	ENSMUST00000219171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019878	Hsf2	ENSMUST00000220353	ENSMUSP00000151957	TRANSLATION	nonsense_mediated_decay	-	-	1	246	0	3.28	0	114.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019878	Hsf2	ENSMUST00000220042	ENSMUSP00000152013	TRANSLATION	protein_coding	-	-	5	478	0	1.53	2.7	271.5	0	-4,-2	-	-	6.984	MINOR
ENSMUSG00000019878	Hsf2	ENSMUST00000218251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019878	Hsf2	ENSMUST00000220162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035478	Mbd3	ENSMUST00000105349	ENSMUSP00000100986	TRANSLATION	protein_coding	-	CCDS78860.1	1	253	0	2.2	0.5	217.2	0	-4,-7	-	-	5.754	MINOR
ENSMUSG00000035478	Mbd3	ENSMUST00000125618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035478	Mbd3	ENSMUST00000105348	ENSMUSP00000100985	TRANSLATION	protein_coding	-	-	5	281	0	2.2	0.5	210.8	0	-4,-7	-	-	5.37	MINOR
ENSMUSG00000035478	Mbd3	ENSMUST00000092295	ENSMUSP00000089948	TRANSLATION	protein_coding	-	CCDS24020.1	1	285	0	3.2	0.5	288	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035478	Mbd3	ENSMUST00000142997	ENSMUSP00000120675	TRANSLATION	protein_coding	start	-	2	185	0	1.2	0	195.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035478	Mbd3	ENSMUST00000105347	ENSMUSP00000100984	TRANSLATION	protein_coding	-	-	2	261	0	2.2	0	217.2	0	-4,-6	-	-	5.754	MINOR
ENSMUSG00000036923	Stox1	ENSMUST00000133371	ENSMUSP00000114652	TRANSLATION	protein_coding	-	CCDS48580.1	1	990	0	0	0.5	119.3	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036923	Stox1	ENSMUST00000126979	ENSMUSP00000114348	TRANSLATION	nonsense_mediated_decay	start	-	3	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036923	Stox1	ENSMUST00000148720	ENSMUSP00000116180	TRANSLATION	protein_coding	start	-	3	136	0	0	0	119.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019867	Gje1	ENSMUST00000020016	ENSMUSP00000020016	TRANSLATION	protein_coding	-	CCDS48505.1	1	205	0	1.1	9.6	111.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000003068	Stk11	ENSMUST00000128992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003068	Stk11	ENSMUST00000105371	ENSMUSP00000101010	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003068	Stk11	ENSMUST00000105370	ENSMUSP00000101009	TRANSLATION	protein_coding	-	-	1	310	7	6.08	0.5	132	0	-4,-5	-	-	2.262	MINOR
ENSMUSG00000003068	Stk11	ENSMUST00000129235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003068	Stk11	ENSMUST00000003152	ENSMUSP00000003152	TRANSLATION	protein_coding	-	CCDS35974.1	1	436	17	8.41	2.7	196.6	0	-4,-5	-	-	16.8	PRINCIPAL:1
ENSMUSG00000003068	Stk11	ENSMUST00000144119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003068	Stk11	ENSMUST00000152592	ENSMUSP00000118853	TRANSLATION	protein_coding	start	-	3	164	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003068	Stk11	ENSMUST00000144883	ENSMUSP00000114195	TRANSLATION	nonsense_mediated_decay	-	-	1	412	17	9.01	1.5	196.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003068	Stk11	ENSMUST00000144108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045591	Olig3	ENSMUST00000053225	ENSMUSP00000057106	TRANSLATION	protein_coding	-	CCDS35855.1	-	273	0	0.2	10.8	44.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000005357	Slc1a6	ENSMUST00000217717	ENSMUSP00000151544	TRANSLATION	protein_coding	stop	-	3	169	0	2.8	0	88.6	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000005357	Slc1a6	ENSMUST00000005490	ENSMUSP00000005490	TRANSLATION	protein_coding	-	CCDS23970.1	1	561	13	7.072	1.5	432.3	5	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000009654	Oit3	ENSMUST00000162493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009654	Oit3	ENSMUST00000009798	ENSMUSP00000009798	TRANSLATION	protein_coding	-	CCDS23865.1	1	546	5	3.5	6.3	227.7	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000035215	Lsm7	ENSMUST00000218897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000220225	ENSMUSP00000151340	TRANSLATION	protein_coding	-	-	1	78	0	1.75	0	52.1	0	-4,-5	-	-	8.004	MINOR
ENSMUSG00000035215	Lsm7	ENSMUST00000217781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000219421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000217921	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000220406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000218119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035215	Lsm7	ENSMUST00000035775	ENSMUSP00000044993	TRANSLATION	protein_coding	-	CCDS35987.1	1	103	0	2.75	13.1	74.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035215	Lsm7	ENSMUST00000218931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060487	Samd5	ENSMUST00000221079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060487	Samd5	ENSMUST00000100070	ENSMUSP00000097648	TRANSLATION	protein_coding	-	CCDS35836.1	1	173	0	0.4	3.9	57.4	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000019845	Tube1	ENSMUST00000213898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019845	Tube1	ENSMUST00000019991	ENSMUSP00000019991	TRANSLATION	protein_coding	-	CCDS23787.1	1	475	21	6.624	13.7	325	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000019845	Tube1	ENSMUST00000213459	ENSMUSP00000150602	TRANSLATION	nonsense_mediated_decay	-	-	1	216	18	3.944	0	212.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019845	Tube1	ENSMUST00000214493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019845	Tube1	ENSMUST00000217214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019845	Tube1	ENSMUST00000213237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112380	Gm9736	ENSMUST00000219969	ENSMUSP00000151736	TRANSLATION	protein_coding	-	-	-	277	0	0	0	54.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019917	Septin10	ENSMUST00000220156	ENSMUSP00000151293	TRANSLATION	protein_coding	-	-	1	452	20	8.132	1.5	324.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019917	Septin10	ENSMUST00000165971	ENSMUSP00000129023	TRANSLATION	protein_coding	-	CCDS48566.1	1	427	20	8.132	0.5	324.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000019917	Septin10	ENSMUST00000218171	ENSMUSP00000151948	TRANSLATION	protein_coding	start	-	3	196	3	4	0	99.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044921	Rassf9	ENSMUST00000055355	ENSMUSP00000054767	TRANSLATION	protein_coding	-	-	5	433	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000044921	Rassf9	ENSMUST00000220230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044921	Rassf9	ENSMUST00000219445	ENSMUSP00000151843	TRANSLATION	protein_coding	-	CCDS36048.1	1	435	0	0	3.9	0	0	-4,-7	-	-	1	PRINCIPAL:2
ENSMUSG00000043822	Adamtsl5	ENSMUST00000095446	ENSMUSP00000093097	TRANSLATION	protein_coding	-	CCDS48628.1	5	485	3	4.2	0.5	176.2	0	-1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000043822	Adamtsl5	ENSMUST00000138705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043822	Adamtsl5	ENSMUST00000105352	ENSMUSP00000100989	TRANSLATION	protein_coding	-	-	1	244	3	3.36	0	35.3	0	-1,-3	-	-	7.32	MINOR
ENSMUSG00000043822	Adamtsl5	ENSMUST00000137571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043822	Adamtsl5	ENSMUST00000128845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043822	Adamtsl5	ENSMUST00000124789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043822	Adamtsl5	ENSMUST00000137576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025393	Atp5b	ENSMUST00000126751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025393	Atp5b	ENSMUST00000144918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025393	Atp5b	ENSMUST00000124993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025393	Atp5b	ENSMUST00000126040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025393	Atp5b	ENSMUST00000026459	ENSMUSP00000026459	TRANSLATION	protein_coding	-	CCDS24259.1	1	529	14	10	6.3	296.4	0	-3,1	-	-	20	PRINCIPAL:1
ENSMUSG00000025393	Atp5b	ENSMUST00000123803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025393	Atp5b	ENSMUST00000139295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025393	Atp5b	ENSMUST00000127439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025393	Atp5b	ENSMUST00000125992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071324	Armc2	ENSMUST00000161167	ENSMUSP00000125635	TRANSLATION	protein_coding	start	-	3	46	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071324	Armc2	ENSMUST00000161927	ENSMUSP00000124049	TRANSLATION	nonsense_mediated_decay	-	-	5	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071324	Armc2	ENSMUST00000162405	ENSMUSP00000125583	TRANSLATION	protein_coding	-	-	1	99	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000071324	Armc2	ENSMUST00000160367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071324	Armc2	ENSMUST00000095729	ENSMUSP00000093397	TRANSLATION	protein_coding	-	-	5	854	0	0	1.5	20.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000071324	Armc2	ENSMUST00000105503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071324	Armc2	ENSMUST00000160262	ENSMUSP00000125412	TRANSLATION	protein_coding	-	-	5	854	0	0	1.5	20.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000071324	Armc2	ENSMUST00000161081	ENSMUSP00000125719	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000124854	ENSMUSP00000118334	TRANSLATION	protein_coding	start/stop	-	2	134	0	2.41	0	13.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000151470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000143285	ENSMUSP00000122074	TRANSLATION	protein_coding	stop	-	5	153	0	4.13	0	144.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000139135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000146358	ENSMUSP00000121125	TRANSLATION	protein_coding	-	CCDS24063.1	1	767	0	10.915	0.5	267.6	0	-4,-7	-	-	10.482	PRINCIPAL:3
ENSMUSG00000034771	Tle2	ENSMUST00000136254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000131794	ENSMUSP00000120218	TRANSLATION	protein_coding	stop	-	3	17	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000131411	ENSMUSP00000114400	TRANSLATION	protein_coding	start	-	5	119	0	3.08	0	13.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000146916	ENSMUSP00000121173	TRANSLATION	protein_coding	stop	-	2	736	0	10.47	0	285.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000153812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000141913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000145878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000129798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034771	Tle2	ENSMUST00000135211	ENSMUSP00000117453	TRANSLATION	protein_coding	-	CCDS56737.1	1	732	0	11.14	0.5	263.8	0	-4,-7	-	-	10.704	ALTERNATIVE:2
ENSMUSG00000034771	Tle2	ENSMUST00000136341	ENSMUSP00000121585	TRANSLATION	protein_coding	stop	-	5	121	0	4.24	0	224.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034771	Tle2	ENSMUST00000140433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003345	Csnk1g2	ENSMUST00000220163	ENSMUSP00000151911	TRANSLATION	nonsense_mediated_decay	start	-	3	48	0	1.248	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003345	Csnk1g2	ENSMUST00000220431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003345	Csnk1g2	ENSMUST00000220025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003345	Csnk1g2	ENSMUST00000217902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003345	Csnk1g2	ENSMUST00000218093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003345	Csnk1g2	ENSMUST00000079773	ENSMUSP00000078706	TRANSLATION	protein_coding	-	CCDS24029.1	1	442	0	7.98	1.5	100	0	-4,-5	-	-	10.776	MINOR
ENSMUSG00000003345	Csnk1g2	ENSMUST00000085435	ENSMUSP00000082560	TRANSLATION	protein_coding	-	CCDS48638.1	1	415	0	7.98	11.5	122.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000003345	Csnk1g2	ENSMUST00000219814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039697	Ncoa7	ENSMUST00000215926	ENSMUSP00000150021	TRANSLATION	protein_coding	-	-	1	894	0	5.23	0	153.3	0	-4,-5	-	-	11.412	ALTERNATIVE:2
ENSMUSG00000039697	Ncoa7	ENSMUST00000215725	ENSMUSP00000150800	TRANSLATION	protein_coding	-	-	1	271	0	0.95	0	31.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000092610	ENSMUSP00000090273	TRANSLATION	protein_coding	-	-	1	161	0	2.266	0	55.4	0	-4,-5	-	-	0.072	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000217138	ENSMUSP00000150461	TRANSLATION	protein_coding	-	-	1	162	0	2.2	0	55.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000213897	ENSMUSP00000148944	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	2.266	0	57.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000213836	ENSMUSP00000149957	TRANSLATION	protein_coding	-	-	1	932	0	5.23	0.5	163.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039697	Ncoa7	ENSMUST00000217644	ENSMUSP00000150671	TRANSLATION	protein_coding	-	-	1	177	0	2.95	0	77.3	0	-4,-5	-	-	2.292	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000217398	ENSMUSP00000149244	TRANSLATION	nonsense_mediated_decay	start	-	2	119	0	0.95	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039697	Ncoa7	ENSMUST00000215740	ENSMUSP00000149335	TRANSLATION	protein_coding	-	CCDS23765.1	1	943	0	5.23	0.5	163.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039697	Ncoa7	ENSMUST00000068567	ENSMUSP00000066741	TRANSLATION	protein_coding	-	CCDS23765.1	5	943	0	5.23	0.5	163.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000039697	Ncoa7	ENSMUST00000216172	ENSMUSP00000150981	TRANSLATION	protein_coding	-	CCDS48530.1	1	221	0	4.28	7.5	131.5	0	-4,-5	-	-	11.202	ALTERNATIVE:1
ENSMUSG00000039697	Ncoa7	ENSMUST00000213889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020241	Col6a2	ENSMUST00000105413	ENSMUSP00000101053	TRANSLATION	protein_coding	-	CCDS83715.1	1	933	10	10.955	0.5	304.4	0	4,-1	-	-	9.042	MINOR
ENSMUSG00000020241	Col6a2	ENSMUST00000137365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020241	Col6a2	ENSMUST00000001181	ENSMUSP00000001181	TRANSLATION	protein_coding	-	CCDS23951.1	1	1034	13	11.435	0.5	440.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000002578	Ikzf4	ENSMUST00000238712	ENSMUSP00000158614	TRANSLATION	protein_coding	-	-	-	539	16	2.44	8.8	62.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000002578	Ikzf4	ENSMUST00000221022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002578	Ikzf4	ENSMUST00000222899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002578	Ikzf4	ENSMUST00000222901	ENSMUSP00000152758	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002578	Ikzf4	ENSMUST00000223162	ENSMUSP00000152663	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002578	Ikzf4	ENSMUST00000223145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002578	Ikzf4	ENSMUST00000238610	ENSMUSP00000158702	TRANSLATION	protein_coding	-	-	-	539	16	2.44	8.8	62.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000002578	Ikzf4	ENSMUST00000221150	ENSMUSP00000152617	TRANSLATION	protein_coding	-	-	1	686	16	2.44	0	62.6	0	-4,-7	-	-	18	MINOR
ENSMUSG00000002578	Ikzf4	ENSMUST00000222067	ENSMUSP00000152234	TRANSLATION	protein_coding	-	-	1	533	16	2.44	2.9	62.6	0	-4,-5	-	-	18.732	MINOR
ENSMUSG00000002578	Ikzf4	ENSMUST00000133342	ENSMUSP00000114404	TRANSLATION	protein_coding	-	CCDS24284.2	2	586	16	2.44	7.5	62.6	0	-4,-7	-	-	20.499	PRINCIPAL:2
ENSMUSG00000020080	Hkdc1	ENSMUST00000159579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020080	Hkdc1	ENSMUST00000020277	ENSMUSP00000020277	TRANSLATION	protein_coding	-	CCDS23888.1	1	915	51	17.75	6.5	1054.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000020080	Hkdc1	ENSMUST00000159493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020080	Hkdc1	ENSMUST00000159454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090622	A930033H14Rik	ENSMUST00000170048	ENSMUSP00000126322	TRANSLATION	protein_coding	-	-	1	103	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000064030	Pym1	ENSMUST00000218218	ENSMUSP00000151691	TRANSLATION	protein_coding	-	-	3	62	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000064030	Pym1	ENSMUST00000163377	ENSMUSP00000129789	TRANSLATION	protein_coding	-	CCDS48729.1	1	203	0	1	0.5	49.4	0	-4,-5	-	-	11.844	PRINCIPAL:4
ENSMUSG00000064030	Pym1	ENSMUST00000065210	ENSMUSP00000067623	TRANSLATION	protein_coding	-	CCDS48730.1	1	202	0	1	0.5	50.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019899	Lama2	ENSMUST00000186965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019899	Lama2	ENSMUST00000219763	ENSMUSP00000151741	TRANSLATION	protein_coding	start	-	5	1127	19	20.02	0	669.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019899	Lama2	ENSMUST00000239098	ENSMUSP00000158963	TRANSLATION	protein_coding	start/stop	-	-	256	0	2.88	0	143.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019899	Lama2	ENSMUST00000187535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019899	Lama2	ENSMUST00000188963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019899	Lama2	ENSMUST00000185839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019899	Lama2	ENSMUST00000186279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019899	Lama2	ENSMUST00000189575	ENSMUSP00000140716	TRANSLATION	protein_coding	-	-	5	1349	5	14.3	0	815.2	0	3,-2	-	-	0	MINOR
ENSMUSG00000019899	Lama2	ENSMUST00000092639	ENSMUSP00000090304	TRANSLATION	protein_coding	-	CCDS48526.1	5	3118	24	38.14	0.5	1868.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000094146	Gm10142	ENSMUST00000179767	ENSMUSP00000135962	TRANSLATION	protein_coding	-	CCDS56724.1	-	120	0	0	1.5	40.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000000374	Trappc10	ENSMUST00000219948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000374	Trappc10	ENSMUST00000217980	ENSMUSP00000151489	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000374	Trappc10	ENSMUST00000218124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000374	Trappc10	ENSMUST00000217858	ENSMUSP00000152048	TRANSLATION	nonsense_mediated_decay	start	-	5	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000374	Trappc10	ENSMUST00000000384	ENSMUSP00000000384	TRANSLATION	protein_coding	-	CCDS35959.1	1	1258	0	0	2.7	142.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047642	D930020B18Rik	ENSMUST00000120642	ENSMUSP00000113963	TRANSLATION	protein_coding	-	CCDS36074.2	5	626	0	0	0.5	777.2	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000047642	D930020B18Rik	ENSMUST00000132744	ENSMUSP00000118274	TRANSLATION	protein_coding	start	-	5	450	0	0	0	436.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047642	D930020B18Rik	ENSMUST00000140802	ENSMUSP00000121976	TRANSLATION	nonsense_mediated_decay	-	-	2	152	0	0	0	196.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000047642	D930020B18Rik	ENSMUST00000142501	ENSMUSP00000118939	TRANSLATION	protein_coding	stop	-	5	182	0	0	0	207.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038446	Cdc40	ENSMUST00000215051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038446	Cdc40	ENSMUST00000044166	ENSMUSP00000044305	TRANSLATION	protein_coding	-	CCDS48546.1	1	579	0	13.5	7.5	101.2	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038446	Cdc40	ENSMUST00000216025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038446	Cdc40	ENSMUST00000215441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038446	Cdc40	ENSMUST00000215625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005054	Cstb	ENSMUST00000005185	ENSMUSP00000005185	TRANSLATION	protein_coding	-	CCDS23964.1	1	98	0	2.75	12.8	78.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019832	Rab32	ENSMUST00000019974	ENSMUSP00000019974	TRANSLATION	protein_coding	-	CCDS23695.1	1	223	21	3	1.5	141.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019832	Rab32	ENSMUST00000220018	ENSMUSP00000152210	TRANSLATION	nonsense_mediated_decay	-	-	5	100	11	1.1	0	53.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020225	Tmbim4	ENSMUST00000156877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020225	Tmbim4	ENSMUST00000123802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020225	Tmbim4	ENSMUST00000145015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020225	Tmbim4	ENSMUST00000020446	ENSMUSP00000020446	TRANSLATION	protein_coding	-	CCDS24205.1	1	238	0	1.8	9.5	159.1	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020225	Tmbim4	ENSMUST00000148678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020225	Tmbim4	ENSMUST00000134797	ENSMUSP00000119967	TRANSLATION	protein_coding	-	-	1	120	0	0	0	35.6	5	-4,-5	-	-	0	MINOR
ENSMUSG00000020225	Tmbim4	ENSMUST00000156247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020225	Tmbim4	ENSMUST00000141206	ENSMUSP00000121824	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000020225	Tmbim4	ENSMUST00000134203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020225	Tmbim4	ENSMUST00000135794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006728	Cdk4	ENSMUST00000140254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006728	Cdk4	ENSMUST00000123456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006728	Cdk4	ENSMUST00000133115	ENSMUSP00000122973	TRANSLATION	protein_coding	stop	-	5	253	21	5.75	0	195.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006728	Cdk4	ENSMUST00000135179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006728	Cdk4	ENSMUST00000142558	ENSMUSP00000116190	TRANSLATION	nonsense_mediated_decay	-	-	5	74	10	1	0	33.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006728	Cdk4	ENSMUST00000145670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006728	Cdk4	ENSMUST00000120226	ENSMUSP00000112549	TRANSLATION	protein_coding	-	-	5	158	11	1.632	0	38.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000006728	Cdk4	ENSMUST00000006911	ENSMUSP00000006911	TRANSLATION	protein_coding	-	CCDS24226.1	1	303	21	7	7.5	217.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000006728	Cdk4	ENSMUST00000125682	ENSMUSP00000117234	TRANSLATION	protein_coding	stop	-	2	271	21	6.25	0	195.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078440	Dohh	ENSMUST00000134592	ENSMUSP00000120386	TRANSLATION	protein_coding	stop	-	3	73	0	1	0	13.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078440	Dohh	ENSMUST00000072751	ENSMUSP00000072534	TRANSLATION	protein_coding	-	CCDS35997.1	1	302	0	4.58	7.5	106.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078440	Dohh	ENSMUST00000121047	ENSMUSP00000113112	TRANSLATION	protein_coding	-	-	2	213	0	3.58	0	62	0	-4,-5	-	-	7.314	MINOR
ENSMUSG00000078440	Dohh	ENSMUST00000145416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078440	Dohh	ENSMUST00000142346	ENSMUSP00000122952	TRANSLATION	protein_coding	stop	-	2	187	0	3.25	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015305	Sash1	ENSMUST00000212869	ENSMUSP00000148780	TRANSLATION	protein_coding	start/stop	-	5	358	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015305	Sash1	ENSMUST00000015449	ENSMUSP00000015449	TRANSLATION	protein_coding	-	CCDS23692.1	1	1230	0	4	0.5	245.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015305	Sash1	ENSMUST00000213032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015305	Sash1	ENSMUST00000212553	ENSMUSP00000148656	TRANSLATION	protein_coding	stop	-	2	157	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038151	Prdm1	ENSMUST00000218369	ENSMUSP00000151237	TRANSLATION	protein_coding	-	-	5	838	19	4.4	0.5	98.2	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000038151	Prdm1	ENSMUST00000105490	ENSMUSP00000101129	TRANSLATION	protein_coding	-	CCDS23825.2	1	823	19	4.4	1.5	98.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038151	Prdm1	ENSMUST00000167340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038151	Prdm1	ENSMUST00000039174	ENSMUSP00000039248	TRANSLATION	protein_coding	-	-	2	856	19	4.4	1.5	98.2	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000051190	Olfr1356	ENSMUST00000205100	ENSMUSP00000144815	TRANSLATION	protein_coding	-	CCDS35964.1	2	320	0	0.42	1.5	195.6	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051190	Olfr1356	ENSMUST00000061289	ENSMUSP00000054345	TRANSLATION	protein_coding	-	CCDS35964.1	-	320	0	0.42	1.5	195.6	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020024	Cep83	ENSMUST00000220352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020024	Cep83	ENSMUST00000020212	ENSMUSP00000020212	TRANSLATION	protein_coding	-	CCDS36041.1	1	692	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020024	Cep83	ENSMUST00000218076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020024	Cep83	ENSMUST00000220052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006344	Ggt5	ENSMUST00000219247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006344	Ggt5	ENSMUST00000072217	ENSMUSP00000072074	TRANSLATION	protein_coding	-	CCDS23928.1	1	573	12	10.46	1.5	539.8	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000006344	Ggt5	ENSMUST00000189972	ENSMUSP00000139459	TRANSLATION	protein_coding	-	-	3	71	0	1.24	0	0	0	1,-4	-	-	0	MINOR
ENSMUSG00000006344	Ggt5	ENSMUST00000218807	ENSMUSP00000151283	TRANSLATION	nonsense_mediated_decay	-	-	1	230	0	4.2	0	159.2	0	1,-4	-	-	-1	MINOR
ENSMUSG00000006344	Ggt5	ENSMUST00000188444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006344	Ggt5	ENSMUST00000219214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006344	Ggt5	ENSMUST00000189991	ENSMUSP00000141106	TRANSLATION	protein_coding	start	-	3	205	0	3.56	0	159	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054027	Nt5dc3	ENSMUST00000218792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054027	Nt5dc3	ENSMUST00000099396	ENSMUSP00000096994	TRANSLATION	protein_coding	-	CCDS36020.1	1	546	9	6.69	1.5	519.9	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000034674	Tdg	ENSMUST00000151390	ENSMUSP00000121000	TRANSLATION	protein_coding	-	CCDS24070.1	1	421	1	7.38	0.5	65.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000034674	Tdg	ENSMUST00000148790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034674	Tdg	ENSMUST00000142658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034674	Tdg	ENSMUST00000133227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034674	Tdg	ENSMUST00000145370	ENSMUSP00000116707	TRANSLATION	protein_coding	stop	-	3	186	1	3.55	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034674	Tdg	ENSMUST00000125970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034674	Tdg	ENSMUST00000135652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034674	Tdg	ENSMUST00000176195	ENSMUSP00000135883	TRANSLATION	nonsense_mediated_decay	start	-	5	111	1	2.75	0	36.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034674	Tdg	ENSMUST00000176326	ENSMUSP00000135009	TRANSLATION	protein_coding	start	-	3	196	0	3.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034674	Tdg	ENSMUST00000177353	ENSMUSP00000135621	TRANSLATION	protein_coding	start	-	3	208	1	4.58	0	61.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034674	Tdg	ENSMUST00000092266	ENSMUSP00000089917	TRANSLATION	protein_coding	-	CCDS36013.1	1	397	1	7.38	0.5	65.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000049858	Suox	ENSMUST00000054764	ENSMUSP00000056195	TRANSLATION	protein_coding	-	CCDS24285.1	1	546	25	1	3.9	405	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000019872	Smpdl3a	ENSMUST00000125076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019872	Smpdl3a	ENSMUST00000151623	ENSMUSP00000122041	TRANSLATION	protein_coding	stop	-	3	104	4	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019872	Smpdl3a	ENSMUST00000020022	ENSMUSP00000020022	TRANSLATION	protein_coding	-	CCDS23857.1	1	445	9	8.05	1.5	62	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000063334	Krr1	ENSMUST00000174653	ENSMUSP00000134408	TRANSLATION	protein_coding	-	-	5	323	0	5.45	0	0	0	-4,-5	-	-	4.398	MINOR
ENSMUSG00000063334	Krr1	ENSMUST00000162678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063334	Krr1	ENSMUST00000163048	ENSMUSP00000125746	TRANSLATION	protein_coding	-	CCDS24168.1	1	380	0	6.25	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063334	Krr1	ENSMUST00000075924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045867	Cradd	ENSMUST00000217809	ENSMUSP00000151735	TRANSLATION	protein_coding	-	CCDS24135.1	1	199	0	2	7.3	107	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045867	Cradd	ENSMUST00000220279	ENSMUSP00000152022	TRANSLATION	protein_coding	-	CCDS24135.1	1	199	0	2	7.3	107	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045867	Cradd	ENSMUST00000218761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045867	Cradd	ENSMUST00000220446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045867	Cradd	ENSMUST00000218651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045867	Cradd	ENSMUST00000053594	ENSMUSP00000050295	TRANSLATION	protein_coding	-	CCDS24135.1	1	199	0	2	7.3	107	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000112023	Lilr4b	ENSMUST00000219598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000218900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000218649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000219960	ENSMUSP00000151563	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000112023	Lilr4b	ENSMUST00000219262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112023	Lilr4b	ENSMUST00000102894	ENSMUSP00000099958	TRANSLATION	protein_coding	-	CCDS23831.1	1	303	0	4.85	0.5	31.6	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000112023	Lilr4b	ENSMUST00000219661	ENSMUSP00000151625	TRANSLATION	protein_coding	-	-	1	208	0	3.35	0.5	31.6	1	2,-2	-	-	9	MINOR
ENSMUSG00000112023	Lilr4b	ENSMUST00000218179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000219053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000219151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000219178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112023	Lilr4b	ENSMUST00000218704	ENSMUSP00000151407	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000112023	Lilr4b	ENSMUST00000219717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037542	Aldh8a1	ENSMUST00000159163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037542	Aldh8a1	ENSMUST00000042699	ENSMUSP00000038878	TRANSLATION	protein_coding	-	CCDS23723.1	1	487	27	6.44	15	556.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037542	Aldh8a1	ENSMUST00000161285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019892	Lrriq1	ENSMUST00000020043	ENSMUSP00000020043	TRANSLATION	protein_coding	-	CCDS48686.1	1	814	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019892	Lrriq1	ENSMUST00000123364	ENSMUSP00000119783	TRANSLATION	protein_coding	stop	-	1	520	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019892	Lrriq1	ENSMUST00000217834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019892	Lrriq1	ENSMUST00000166240	ENSMUSP00000131419	TRANSLATION	protein_coding	-	CCDS48687.1	5	1673	0	4.79	0.5	94.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019892	Lrriq1	ENSMUST00000218841	ENSMUSP00000151651	TRANSLATION	protein_coding	start	-	5	158	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020057	Dram1	ENSMUST00000156097	ENSMUSP00000123685	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000020057	Dram1	ENSMUST00000138159	ENSMUSP00000116312	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020057	Dram1	ENSMUST00000020249	ENSMUSP00000020249	TRANSLATION	protein_coding	-	CCDS24109.1	1	238	0	0	8.8	169.9	6	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000117965	AC141477.1	ENSMUST00000235907	ENSMUSP00000157628	TRANSLATION	protein_coding	-	-	-	67	0	0	0	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020020	Usp44	ENSMUST00000216224	ENSMUSP00000149020	TRANSLATION	protein_coding	-	-	5	711	4	2.4	0.5	254.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020020	Usp44	ENSMUST00000095333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020169	Best3	ENSMUST00000020378	ENSMUSP00000020378	TRANSLATION	protein_coding	-	CCDS24188.1	1	669	0	7.5	0.5	367.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094496	Olfr792	ENSMUST00000215436	ENSMUSP00000149872	TRANSLATION	protein_coding	-	CCDS24322.1	5	311	0	0.42	6.4	180.1	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000094496	Olfr792	ENSMUST00000076575	ENSMUSP00000096707	TRANSLATION	protein_coding	-	CCDS24322.1	-	311	0	0.42	6.4	180.1	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000035864	Syt1	ENSMUST00000146618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035864	Syt1	ENSMUST00000126278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035864	Syt1	ENSMUST00000105276	ENSMUSP00000100912	TRANSLATION	protein_coding	-	CCDS24163.1	1	421	21	6.7	11.7	184.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000035864	Syt1	ENSMUST00000064054	ENSMUSP00000063293	TRANSLATION	protein_coding	-	CCDS24163.1	1	421	21	6.7	11.7	184.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000035864	Syt1	ENSMUST00000147593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035864	Syt1	ENSMUST00000156979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074695	Il22	ENSMUST00000096691	ENSMUSP00000094449	TRANSLATION	protein_coding	-	CCDS36070.1	1	179	0	4.05	3.9	243.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000037990	Sh3rf3	ENSMUST00000133151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037990	Sh3rf3	ENSMUST00000135526	ENSMUSP00000114368	TRANSLATION	protein_coding	-	-	1	438	8	2.2	0	107.2	0	-3,-6	-	-	8.118	MINOR
ENSMUSG00000037990	Sh3rf3	ENSMUST00000148267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037990	Sh3rf3	ENSMUST00000152924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037990	Sh3rf3	ENSMUST00000153031	ENSMUSP00000120938	TRANSLATION	protein_coding	-	CCDS35906.2	1	878	8	4.14	1.5	212.5	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061032	Rrp1	ENSMUST00000062678	ENSMUSP00000058785	TRANSLATION	protein_coding	-	CCDS35961.1	1	494	0	0	0.5	234.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000061032	Rrp1	ENSMUST00000219901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061032	Rrp1	ENSMUST00000218962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061032	Rrp1	ENSMUST00000219374	ENSMUSP00000151634	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	24.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061032	Rrp1	ENSMUST00000219406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061032	Rrp1	ENSMUST00000219141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061032	Rrp1	ENSMUST00000217835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061032	Rrp1	ENSMUST00000217824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096421	Gm10100	ENSMUST00000179726	ENSMUSP00000137358	TRANSLATION	protein_coding	-	CCDS56725.1	-	120	0	0	1.5	28.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019853	Hebp2	ENSMUST00000213153	ENSMUSP00000150459	TRANSLATION	protein_coding	-	-	1	116	0	2.75	1.2	63.1	0	-4,-5	-	-	2.188	MINOR
ENSMUSG00000019853	Hebp2	ENSMUST00000214548	ENSMUSP00000149513	TRANSLATION	protein_coding	-	-	1	140	0	3.75	0	96.5	0	-4,-5	-	-	6.114	MINOR
ENSMUSG00000019853	Hebp2	ENSMUST00000020000	ENSMUSP00000020000	TRANSLATION	protein_coding	-	CCDS23711.1	1	205	0	5.25	6.3	144.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000112611	Glipr1l3	ENSMUST00000220085	ENSMUSP00000151818	TRANSLATION	protein_coding	-	-	5	236	0	2.97	0.5	87.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019854	Reps1	ENSMUST00000144287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019854	Reps1	ENSMUST00000128711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019854	Reps1	ENSMUST00000164556	ENSMUSP00000130501	TRANSLATION	protein_coding	-	CCDS48507.1	1	768	6	3.38	10.6	0	0	-4,-5	-	-	14.667	ALTERNATIVE:1
ENSMUSG00000019854	Reps1	ENSMUST00000154718	ENSMUSP00000119358	TRANSLATION	protein_coding	-	-	5	705	6	3.38	1.2	0	0	-4,-5	-	-	12.057	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000150533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019854	Reps1	ENSMUST00000150029	ENSMUSP00000119651	TRANSLATION	protein_coding	start	-	1	755	6	3.38	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000216413	ENSMUSP00000149418	TRANSLATION	nonsense_mediated_decay	-	-	3	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000216576	ENSMUSP00000149107	TRANSLATION	protein_coding	start	-	3	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000126390	ENSMUSP00000123238	TRANSLATION	protein_coding	-	CCDS23710.2	1	795	6	3.38	11.8	0	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000019854	Reps1	ENSMUST00000155892	ENSMUSP00000117431	TRANSLATION	protein_coding	start/stop	-	5	240	6	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000155959	ENSMUSP00000114387	TRANSLATION	protein_coding	start/stop	-	5	210	6	3.38	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019854	Reps1	ENSMUST00000155284	ENSMUSP00000119629	TRANSLATION	nonsense_mediated_decay	-	-	5	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003746	Man1a	ENSMUST00000105469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003746	Man1a	ENSMUST00000218317	ENSMUSP00000151328	TRANSLATION	nonsense_mediated_decay	-	-	1	361	0	2.95	0	119.7	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000003746	Man1a	ENSMUST00000219234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003746	Man1a	ENSMUST00000003843	ENSMUSP00000003843	TRANSLATION	protein_coding	-	CCDS23848.1	1	655	0	10.95	3.9	501.1	3	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000003746	Man1a	ENSMUST00000146483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003746	Man1a	ENSMUST00000220088	ENSMUSP00000151568	TRANSLATION	protein_coding	stop	-	5	744	0	10.95	1.5	501.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000003746	Man1a	ENSMUST00000133330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003746	Man1a	ENSMUST00000105470	ENSMUSP00000101110	TRANSLATION	protein_coding	-	CCDS23848.1	5	655	0	10.95	3.9	501.1	3	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044199	S1pr4	ENSMUST00000053646	ENSMUSP00000050412	TRANSLATION	protein_coding	-	CCDS24059.1	-	386	0	0.6	0.5	106.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000060935	Tmem263	ENSMUST00000095383	ENSMUSP00000093030	TRANSLATION	protein_coding	-	CCDS24087.1	1	115	0	0	14.8	151.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000060935	Tmem263	ENSMUST00000216771	ENSMUSP00000149447	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0	14.8	151.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112160	BC024063	ENSMUST00000220287	ENSMUSP00000151688	TRANSLATION	protein_coding	-	-	2	749	90	1.8	0.5	448.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000113262	Gm48551	ENSMUST00000144647	ENSMUSP00000116074	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	200	0	3.35	0	61.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000113262	Gm48551	ENSMUST00000131968	ENSMUSP00000115416	TRANSLATION	protein_coding,RT	start/stop	-	3	224	0	2	0	52.5	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000034453	Polr3b	ENSMUST00000077175	ENSMUSP00000076418	TRANSLATION	protein_coding	-	CCDS24081.1	1	1133	9	24.45	17.5	1027.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000034453	Polr3b	ENSMUST00000213543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034453	Polr3b	ENSMUST00000215853	ENSMUSP00000149862	TRANSLATION	nonsense_mediated_decay	start	-	3	179	0	4.06	0	96.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034453	Polr3b	ENSMUST00000213263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019789	Hey2	ENSMUST00000019924	ENSMUSP00000019924	TRANSLATION	protein_coding	-	CCDS23766.1	1	339	0	1.96	9.6	116.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019789	Hey2	ENSMUST00000217504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074748	Atxn7l3b	ENSMUST00000099276	ENSMUSP00000096882	TRANSLATION	protein_coding	-	CCDS36060.1	-	97	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000074748	Atxn7l3b	ENSMUST00000165438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019831	Wasf1	ENSMUST00000019975	ENSMUSP00000019975	TRANSLATION	protein_coding	-	CCDS23801.1	1	559	0	8	10.8	30.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000019831	Wasf1	ENSMUST00000105509	ENSMUSP00000101148	TRANSLATION	protein_coding	-	CCDS23801.1	5	559	0	8	10.8	30.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000019997	Ccn2	ENSMUST00000176228	ENSMUSP00000135147	TRANSLATION	protein_coding	-	-	2	293	7	0	0	111	0	4,-1	-	-	8.322	MINOR
ENSMUSG00000019997	Ccn2	ENSMUST00000129142	ENSMUSP00000135212	TRANSLATION	protein_coding	stop	-	2	80	4	0	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019997	Ccn2	ENSMUST00000020171	ENSMUSP00000020171	TRANSLATION	protein_coding	-	CCDS23751.1	1	348	7	0	7.5	172.3	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000035722	Abca7	ENSMUST00000132517	ENSMUSP00000115111	TRANSLATION	protein_coding	-	CCDS24004.1	5	2159	21	9.96	0.5	379.6	2	-3,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000035722	Abca7	ENSMUST00000043866	ENSMUSP00000043090	TRANSLATION	protein_coding	-	CCDS24004.1	1	2159	21	9.96	0.5	379.6	2	-3,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000035722	Abca7	ENSMUST00000171637	ENSMUSP00000128121	TRANSLATION	protein_coding	-	CCDS83724.1	1	2167	21	9.96	0.5	379.6	2	-3,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000020098	Pcbd1	ENSMUST00000020298	ENSMUSP00000020298	TRANSLATION	protein_coding	-	CCDS35913.1	1	104	8	2.75	18.3	106.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020098	Pcbd1	ENSMUST00000218005	ENSMUSP00000151542	TRANSLATION	protein_coding	-	-	3	60	8	1.75	0	76.6	0	-4,-6	-	-	13.998	MINOR
ENSMUSG00000019971	Cep290	ENSMUST00000220231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019971	Cep290	ENSMUST00000218703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019971	Cep290	ENSMUST00000164751	ENSMUSP00000130899	TRANSLATION	protein_coding	-	CCDS48685.1	5	2479	0	0	2.7	172.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000019971	Cep290	ENSMUST00000219765	ENSMUSP00000151712	TRANSLATION	protein_coding	-	-	5	2472	0	0	2.9	172.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000019971	Cep290	ENSMUST00000219889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019971	Cep290	ENSMUST00000219643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019971	Cep290	ENSMUST00000220346	ENSMUSP00000151388	TRANSLATION	protein_coding	-	CCDS48685.1	5	2479	0	0	2.7	172.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000019971	Cep290	ENSMUST00000218000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019971	Cep290	ENSMUST00000220331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019971	Cep290	ENSMUST00000219408	ENSMUSP00000151414	TRANSLATION	protein_coding	start	-	2	237	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034854	Mfsd12	ENSMUST00000132368	ENSMUSP00000120259	TRANSLATION	nonsense_mediated_decay	-	-	5	133	0	0.6	0	28.3	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000034854	Mfsd12	ENSMUST00000044844	ENSMUSP00000036116	TRANSLATION	protein_coding	-	CCDS35996.1	1	476	0	1.57	1.5	103.8	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063374	Olfr763	ENSMUST00000077460	ENSMUSP00000076671	TRANSLATION	protein_coding	-	CCDS24303.1	-	309	0	0.2	2.7	156.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006732	Mettl1	ENSMUST00000006915	ENSMUSP00000006915	TRANSLATION	protein_coding	-	CCDS24223.1	1	268	17	7.08	1.5	204	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000006732	Mettl1	ENSMUST00000139486	ENSMUSP00000118885	TRANSLATION	nonsense_mediated_decay	start	-	5	97	5	2.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006732	Mettl1	ENSMUST00000120542	ENSMUSP00000113030	TRANSLATION	protein_coding	-	-	1	228	15	5.08	0	137.9	0	-4,-7	-	-	8.7	MINOR
ENSMUSG00000006732	Mettl1	ENSMUST00000135655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006732	Mettl1	ENSMUST00000152960	ENSMUSP00000118282	TRANSLATION	protein_coding	stop	-	3	34	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000217938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019820	Utrn	ENSMUST00000218635	ENSMUSP00000151431	TRANSLATION	protein_coding	-	CCDS35841.1	5	3430	0	16.85	0.5	765.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019820	Utrn	ENSMUST00000219135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019820	Utrn	ENSMUST00000219003	ENSMUSP00000151628	TRANSLATION	protein_coding	-	-	5	956	0	7.4	7.6	403	0	-4,-5	-	-	3	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000219130	ENSMUSP00000151274	TRANSLATION	protein_coding	stop	-	3	186	0	4.65	0	103.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000217994	ENSMUSP00000151592	TRANSLATION	protein_coding	-	-	1	987	0	7.4	7.6	403.7	0	-4,0	-	-	3	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000219724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019820	Utrn	ENSMUST00000219163	ENSMUSP00000151259	TRANSLATION	nonsense_mediated_decay	-	-	3	62	0	0.816	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000219660	ENSMUSP00000151359	TRANSLATION	protein_coding	stop	-	1	730	0	9.45	0	256.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000076817	ENSMUSP00000076093	TRANSLATION	protein_coding	-	CCDS35841.1	1	3430	0	16.85	0.5	765.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019820	Utrn	ENSMUST00000219584	ENSMUSP00000152040	TRANSLATION	protein_coding	stop	-	1	730	0	9.45	0	256.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000217899	ENSMUSP00000151938	TRANSLATION	protein_coding	stop	-	1	732	0	9.3	0	256.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019820	Utrn	ENSMUST00000219145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094913	Gm9507	ENSMUST00000180157	ENSMUSP00000136824	TRANSLATION	protein_coding	stop	-	-	218	0	0	0	72.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094913	Gm9507	ENSMUST00000095491	ENSMUSP00000093145	TRANSLATION	protein_coding	-	-	-	223	0	0	0	75.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035923	Myf6	ENSMUST00000044210	ENSMUSP00000047529	TRANSLATION	protein_coding	-	CCDS24162.1	1	242	0	0.6	9.5	129.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071065	Olfr806	ENSMUST00000215142	ENSMUSP00000150380	TRANSLATION	protein_coding	-	CCDS24333.1	3	313	0	0.24	2.7	176.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071065	Olfr806	ENSMUST00000213239	ENSMUSP00000149115	TRANSLATION	protein_coding	-	CCDS24333.1	5	313	0	0.24	2.7	176.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071065	Olfr806	ENSMUST00000095245	ENSMUSP00000092873	TRANSLATION	protein_coding	-	CCDS24333.1	-	313	0	0.24	2.7	176.4	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019942	Cdk1	ENSMUST00000149474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019942	Cdk1	ENSMUST00000020099	ENSMUSP00000020099	TRANSLATION	protein_coding	-	CCDS23908.1	1	297	19	7	8.8	259.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000019942	Cdk1	ENSMUST00000123458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019942	Cdk1	ENSMUST00000152448	ENSMUSP00000119085	TRANSLATION	protein_coding	stop	-	3	200	19	4.5	0	214.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019942	Cdk1	ENSMUST00000129444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019942	Cdk1	ENSMUST00000119827	ENSMUSP00000113184	TRANSLATION	protein_coding	-	CCDS23908.1	5	297	19	7	8.8	259.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000019942	Cdk1	ENSMUST00000124054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025357	Dgka	ENSMUST00000217957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025357	Dgka	ENSMUST00000026414	ENSMUSP00000026414	TRANSLATION	protein_coding	-	CCDS24290.1	1	730	8	6.34	1.5	477	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025357	Dgka	ENSMUST00000219834	ENSMUSP00000152021	TRANSLATION	nonsense_mediated_decay	-	-	1	253	8	5.42	0	133.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020130	Tbc1d15	ENSMUST00000217886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020130	Tbc1d15	ENSMUST00000020339	ENSMUSP00000020339	TRANSLATION	protein_coding	-	CCDS24176.1	1	671	0	9.95	6.3	321.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020130	Tbc1d15	ENSMUST00000217843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020130	Tbc1d15	ENSMUST00000219274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039531	Zup1	ENSMUST00000048222	ENSMUSP00000037121	TRANSLATION	protein_coding	-	CCDS23772.1	1	566	15	0.66	0.5	247.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000218275	ENSMUSP00000151484	TRANSLATION	nonsense_mediated_decay	-	-	1	279	15	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000218055	ENSMUSP00000151811	TRANSLATION	protein_coding	-	-	1	577	15	0.66	5.1	247.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000039531	Zup1	ENSMUST00000219457	ENSMUSP00000151455	TRANSLATION	nonsense_mediated_decay	-	-	1	279	15	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000219878	ENSMUSP00000151477	TRANSLATION	nonsense_mediated_decay	-	-	1	226	15	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000218880	ENSMUSP00000151662	TRANSLATION	protein_coding	-	-	5	551	15	0.66	0	237.1	0	-4,-5	-	-	17.376	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000218892	ENSMUSP00000151562	TRANSLATION	protein_coding	stop	-	2	94	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039531	Zup1	ENSMUST00000219935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039531	Zup1	ENSMUST00000218222	ENSMUSP00000151230	TRANSLATION	protein_coding	stop	-	3	136	8	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048701	Ccdc6	ENSMUST00000147545	ENSMUSP00000123374	TRANSLATION	protein_coding	-	CCDS48591.1	5	469	0	0	1.5	496.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048701	Ccdc6	ENSMUST00000156001	ENSMUSP00000115678	TRANSLATION	protein_coding	start	-	3	137	0	0	0	83.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048701	Ccdc6	ENSMUST00000135607	ENSMUSP00000116408	TRANSLATION	protein_coding	start	-	2	136	0	0	0	67.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048701	Ccdc6	ENSMUST00000145990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044293	Olfr794	ENSMUST00000059957	ENSMUSP00000049790	TRANSLATION	protein_coding	-	CCDS24323.1	-	320	0	0.3	1.5	166.4	4	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044293	Olfr794	ENSMUST00000204820	ENSMUSP00000145301	TRANSLATION	protein_coding	-	CCDS24323.1	2	320	0	0.3	1.5	166.4	4	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095696	Olfr786	ENSMUST00000204529	ENSMUSP00000145099	TRANSLATION	protein_coding	-	CCDS24317.1	3	312	0	0.42	7.5	180.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095696	Olfr786	ENSMUST00000076508	ENSMUSP00000075827	TRANSLATION	protein_coding	-	CCDS24317.1	-	312	0	0.42	7.5	180.1	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074657	Kif5a	ENSMUST00000099172	ENSMUSP00000096775	TRANSLATION	protein_coding	-	CCDS24233.1	1	1027	11	10.16	1.5	369.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074657	Kif5a	ENSMUST00000218298	ENSMUSP00000151969	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074657	Kif5a	ENSMUST00000217895	ENSMUSP00000151402	TRANSLATION	protein_coding	-	CCDS24233.1	1	1027	11	10.16	1.5	369.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034833	Tespa1	ENSMUST00000218605	ENSMUSP00000151338	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034833	Tespa1	ENSMUST00000220164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034833	Tespa1	ENSMUST00000042586	ENSMUSP00000047284	TRANSLATION	protein_coding	-	CCDS48735.1	1	458	0	0	0.5	174.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034833	Tespa1	ENSMUST00000218040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034833	Tespa1	ENSMUST00000219450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034833	Tespa1	ENSMUST00000217702	ENSMUSP00000152009	TRANSLATION	protein_coding	-	-	1	238	0	0	0	127	0	-4,-2	-	-	3.132	MINOR
ENSMUSG00000035754	Wdr18	ENSMUST00000045247	ENSMUSP00000041049	TRANSLATION	protein_coding	-	CCDS24000.1	1	431	0	4.2	5.1	128.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000035754	Wdr18	ENSMUST00000218515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035754	Wdr18	ENSMUST00000220272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035754	Wdr18	ENSMUST00000220249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035754	Wdr18	ENSMUST00000218449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019796	Lrp11	ENSMUST00000134346	ENSMUSP00000122853	TRANSLATION	protein_coding	stop	-	1	413	3	2.68	0	117.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000019796	Lrp11	ENSMUST00000135907	ENSMUSP00000122359	TRANSLATION	protein_coding	start	-	2	245	0	0.48	0	88.3	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000019796	Lrp11	ENSMUST00000130590	ENSMUSP00000121704	TRANSLATION	protein_coding	-	-	1	438	3	2.68	0	117.6	0	1,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000019796	Lrp11	ENSMUST00000124961	ENSMUSP00000114479	TRANSLATION	protein_coding	start/stop	-	3	217	0	1.6	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000019796	Lrp11	ENSMUST00000019931	ENSMUSP00000019931	TRANSLATION	protein_coding	-	CCDS23686.1	1	483	3	2.68	0.5	117.6	2	1,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000020205	Phlda1	ENSMUST00000186359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020205	Phlda1	ENSMUST00000164773	ENSMUSP00000132815	TRANSLATION	protein_coding	-	CCDS24167.2	1	405	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000009646	Pla2g12b	ENSMUST00000009790	ENSMUSP00000009790	TRANSLATION	protein_coding	-	CCDS23864.1	1	195	0	0	6.3	288	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000009646	Pla2g12b	ENSMUST00000162643	ENSMUSP00000123842	TRANSLATION	protein_coding	start	-	2	101	0	0	0	117	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000087651	1500009L16Rik	ENSMUST00000218623	ENSMUSP00000151432	TRANSLATION	protein_coding	start	-	3	61	0	0	0	85.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000087651	1500009L16Rik	ENSMUST00000218196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087651	1500009L16Rik	ENSMUST00000150459	ENSMUSP00000129542	TRANSLATION	protein_coding	-	CCDS48656.1	1	63	0	0	6.3	117.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000058251	Olfr822	ENSMUST00000080460	ENSMUSP00000079316	TRANSLATION	protein_coding	-	CCDS24347.1	-	312	0	0.36	6.4	167.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058251	Olfr822	ENSMUST00000216879	ENSMUSP00000150652	TRANSLATION	protein_coding	-	CCDS24347.1	5	312	0	0.36	6.4	167.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096744	Gm4307	ENSMUST00000177945	ENSMUSP00000135905	TRANSLATION	protein_coding	-	CCDS48683.1	-	289	0	1	0.5	70.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090035	Galnt4	ENSMUST00000161240	ENSMUSP00000125315	TRANSLATION	protein_coding	-	CCDS48679.1	-	578	23	0.64	2.7	208	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000096856	Gm10778	ENSMUST00000189672	ENSMUSP00000140398	TRANSLATION	protein_coding	-	CCDS78871.1	1	499	56	2.2	1.5	345.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096856	Gm10778	ENSMUST00000105315	ENSMUSP00000100952	TRANSLATION	protein_coding	start	-	5	498	56	2.2	1.5	345.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020107	Anapc16	ENSMUST00000182152	ENSMUSP00000138579	TRANSLATION	protein_coding	-	CCDS83700.1	2	129	0	2.75	1.5	0	0	-4,-6	-	-	6.153	MINOR
ENSMUSG00000020107	Anapc16	ENSMUST00000182116	ENSMUSP00000138227	TRANSLATION	protein_coding	-	-	3	32	0	1	0	0	0	-4,-5	-	-	2.184	MINOR
ENSMUSG00000020107	Anapc16	ENSMUST00000020307	ENSMUSP00000020307	TRANSLATION	protein_coding	-	CCDS83700.1	2	129	0	2.75	1.5	0	0	-4,-6	-	-	6.153	MINOR
ENSMUSG00000020107	Anapc16	ENSMUST00000182925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020107	Anapc16	ENSMUST00000182898	ENSMUSP00000138112	TRANSLATION	protein_coding	-	CCDS23869.1	1	110	0	2.75	10.8	0	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000020107	Anapc16	ENSMUST00000182912	ENSMUSP00000138384	TRANSLATION	protein_coding	-	-	2	32	0	1	0	0	0	-4,-5	-	-	2.184	MINOR
ENSMUSG00000020107	Anapc16	ENSMUST00000183093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020107	Anapc16	ENSMUST00000183113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020021	Fgd6	ENSMUST00000125535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020021	Fgd6	ENSMUST00000020208	ENSMUSP00000020208	TRANSLATION	protein_coding	-	CCDS48674.1	1	1399	3	13.1	0.5	274.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020021	Fgd6	ENSMUST00000141143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060002	Chpt1	ENSMUST00000143108	ENSMUSP00000117620	TRANSLATION	nonsense_mediated_decay	start	-	5	184	0	0	0	68	11	-3,-5	-	-	-1	MINOR
ENSMUSG00000060002	Chpt1	ENSMUST00000020253	ENSMUSP00000020253	TRANSLATION	protein_coding	-	CCDS24112.1	1	398	0	0	0.5	68	18	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000060002	Chpt1	ENSMUST00000117579	ENSMUSP00000113179	TRANSLATION	protein_coding	-	-	1	232	0	0	0	68	10	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000060002	Chpt1	ENSMUST00000126074	ENSMUSP00000123429	TRANSLATION	nonsense_mediated_decay	-	-	5	218	0	0	0	68	11	-4,-2	-	-	-1	MINOR
ENSMUSG00000060002	Chpt1	ENSMUST00000134318	ENSMUSP00000122428	TRANSLATION	protein_coding	start	-	5	160	0	0	0	0	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000060002	Chpt1	ENSMUST00000117440	ENSMUSP00000112708	TRANSLATION	protein_coding	-	CCDS48665.1	5	406	0	0	2.9	68	18	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000060002	Chpt1	ENSMUST00000073783	ENSMUSP00000073455	TRANSLATION	protein_coding	-	-	1	237	0	0	0	68	10	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000060002	Chpt1	ENSMUST00000148899	ENSMUSP00000120167	TRANSLATION	protein_coding	start	-	3	84	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000060002	Chpt1	ENSMUST00000139109	ENSMUSP00000116413	TRANSLATION	nonsense_mediated_decay	-	-	1	398	0	0	0.5	68	18	-4,-2	-	-	-1	MINOR
ENSMUSG00000039508	Calhm4	ENSMUST00000048052	ENSMUSP00000042466	TRANSLATION	protein_coding	-	CCDS35878.1	1	315	0	0	5.1	260.8	3	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000039508	Calhm4	ENSMUST00000218239	ENSMUSP00000151481	TRANSLATION	protein_coding	-	-	-	190	0	0	0	171.5	2	-4,-7	-	-	0.642	MINOR
ENSMUSG00000025410	Dctn2	ENSMUST00000217692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025410	Dctn2	ENSMUST00000220418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025410	Dctn2	ENSMUST00000026479	ENSMUSP00000026479	TRANSLATION	protein_coding	-	CCDS24234.1	1	402	0	2.85	7.5	420.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025410	Dctn2	ENSMUST00000218752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025410	Dctn2	ENSMUST00000218556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020284	Cfap410	ENSMUST00000116237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020284	Cfap410	ENSMUST00000149074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020284	Cfap410	ENSMUST00000105398	ENSMUSP00000101037	TRANSLATION	protein_coding	-	-	1	212	0	2.26	0	0	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000020284	Cfap410	ENSMUST00000123999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020284	Cfap410	ENSMUST00000136275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020284	Cfap410	ENSMUST00000105397	ENSMUSP00000101036	TRANSLATION	protein_coding	-	CCDS35954.1	1	249	0	2.26	1.5	0	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000020284	Cfap410	ENSMUST00000130949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020284	Cfap410	ENSMUST00000129277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107648	Olfr764-ps1	ENSMUST00000204763	ENSMUSP00000153893	TRANSLATION	protein_coding	-	-	5	326	0	0.42	0	174.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019762	Iyd	ENSMUST00000141745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019762	Iyd	ENSMUST00000019896	ENSMUSP00000019896	TRANSLATION	protein_coding	-	CCDS56670.1	1	285	18	5	5.1	0	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000005683	Cs	ENSMUST00000005826	ENSMUSP00000005826	TRANSLATION	protein_coding	-	CCDS24273.1	1	464	23	9.05	4.1	0	0	-1,2	-	-	13	PRINCIPAL:1
ENSMUSG00000005683	Cs	ENSMUST00000218159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025404	R3hdm2	ENSMUST00000105250	ENSMUSP00000100885	TRANSLATION	protein_coding	-	-	5	1026	0	3.58	5.3	83.8	0	-4,-5	-	-	13.622	ALTERNATIVE:1
ENSMUSG00000025404	R3hdm2	ENSMUST00000111628	ENSMUSP00000107255	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000171823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025404	R3hdm2	ENSMUST00000170336	ENSMUSP00000128659	TRANSLATION	protein_coding	-	CCDS48718.1	1	1012	0	3.58	6.3	40.4	0	-4,-5	-	-	10.892	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000164831	ENSMUSP00000131007	TRANSLATION	protein_coding	-	-	5	978	0	3.58	6.3	40.4	0	-4,-5	-	-	10.892	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000164161	ENSMUSP00000126185	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000166820	ENSMUSP00000126608	TRANSLATION	protein_coding	-	CCDS48717.1	5	1044	0	3.58	6.3	83.8	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000025404	R3hdm2	ENSMUST00000170164	ENSMUSP00000132879	TRANSLATION	protein_coding	stop	-	2	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000164469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025404	R3hdm2	ENSMUST00000168079	ENSMUSP00000130506	TRANSLATION	protein_coding	start/stop	-	3	154	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000169888	ENSMUSP00000126760	TRANSLATION	protein_coding	start	-	1	743	0	0.75	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000168780	ENSMUSP00000127872	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000064793	ENSMUSP00000069724	TRANSLATION	protein_coding	-	CCDS24241.1	1	999	0	3.58	0.5	40.4	0	-4,-5	-	-	8.892	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000077046	ENSMUSP00000076303	TRANSLATION	protein_coding	-	CCDS48717.1	5	1044	0	3.58	6.3	83.8	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000025404	R3hdm2	ENSMUST00000105249	ENSMUSP00000100884	TRANSLATION	protein_coding	-	-	5	992	0	3.58	5.1	83.8	0	-4,-5	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000025404	R3hdm2	ENSMUST00000165440	ENSMUSP00000133118	TRANSLATION	protein_coding	start/stop	-	3	91	0	1.08	0	43.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000171434	ENSMUSP00000131255	TRANSLATION	protein_coding	stop	-	2	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000171426	ENSMUSP00000132683	TRANSLATION	protein_coding	start	-	3	264	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025404	R3hdm2	ENSMUST00000168268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025404	R3hdm2	ENSMUST00000163794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025404	R3hdm2	ENSMUST00000105251	ENSMUSP00000100886	TRANSLATION	protein_coding	-	-	5	1026	0	3.58	5.3	83.8	0	-4,-5	-	-	13.622	ALTERNATIVE:1
ENSMUSG00000037846	Rtkn2	ENSMUST00000123147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037846	Rtkn2	ENSMUST00000118160	ENSMUSP00000112946	TRANSLATION	protein_coding	-	-	1	604	0	0	0.5	195.5	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000037846	Rtkn2	ENSMUST00000117086	ENSMUSP00000112419	TRANSLATION	protein_coding	-	-	1	601	0	0	1.5	195.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000037846	Rtkn2	ENSMUST00000147556	ENSMUSP00000116166	TRANSLATION	nonsense_mediated_decay	-	-	1	601	0	0	1.5	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037846	Rtkn2	ENSMUST00000105437	ENSMUSP00000101077	TRANSLATION	protein_coding	-	-	5	602	0	0	1.5	194.8	0	-4,-5	-	-	5.958	ALTERNATIVE:2
ENSMUSG00000037846	Rtkn2	ENSMUST00000068994	ENSMUSP00000070717	TRANSLATION	nonsense_mediated_decay	-	-	1	604	0	0	0.5	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019774	Mtrf1l	ENSMUST00000019908	ENSMUSP00000019908	TRANSLATION	protein_coding	-	CCDS56684.1	1	373	0	5.1	1.5	314.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000019774	Mtrf1l	ENSMUST00000145718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019774	Mtrf1l	ENSMUST00000145687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089789	Rdh1	ENSMUST00000073639	ENSMUSP00000073322	TRANSLATION	protein_coding	-	CCDS24250.1	1	317	27	2.4	1.5	141.6	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000020171	Yeats4	ENSMUST00000219609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020171	Yeats4	ENSMUST00000218887	ENSMUSP00000151659	TRANSLATION	nonsense_mediated_decay	-	-	1	95	0	1.65	0	47.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020171	Yeats4	ENSMUST00000020382	ENSMUSP00000020382	TRANSLATION	protein_coding	-	CCDS24191.1	1	227	0	3.42	19.5	116.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000054206	Gzmm	ENSMUST00000151213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054206	Gzmm	ENSMUST00000020549	ENSMUSP00000020549	TRANSLATION	protein_coding	-	CCDS23984.1	1	264	6	4.1	1.5	210	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000020112	ENSMUSP00000020112	TRANSLATION	protein_coding	-	CCDS36028.1	1	1457	0	0	0.5	65.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000218607	ENSMUSP00000151726	TRANSLATION	protein_coding	start	-	1	340	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000219117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000219712	ENSMUSP00000151385	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000218776	ENSMUSP00000151698	TRANSLATION	nonsense_mediated_decay	start	-	1	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000219819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000220375	ENSMUSP00000151755	TRANSLATION	protein_coding	stop	-	1	590	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019951	Uhrf1bp1l	ENSMUST00000219749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035041	Creb3l3	ENSMUST00000143969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035041	Creb3l3	ENSMUST00000127374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035041	Creb3l3	ENSMUST00000117422	ENSMUSP00000112836	TRANSLATION	protein_coding	-	CCDS24043.1	1	479	0	1.075	0.5	43.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035041	Creb3l3	ENSMUST00000125907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047129	1700113H08Rik	ENSMUST00000189456	ENSMUSP00000140447	TRANSLATION	protein_coding	-	-	5	207	0	0	0.5	215.1	0	-4,-7	-	-	0	MINOR
ENSMUSG00000047129	1700113H08Rik	ENSMUST00000189775	ENSMUSP00000141184	TRANSLATION	protein_coding	-	-	1	161	0	0	0.5	218.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000047129	1700113H08Rik	ENSMUST00000169849	ENSMUSP00000130852	TRANSLATION	protein_coding	-	CCDS48660.1	5	327	0	0	0.5	365.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020175	Rab36	ENSMUST00000136944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020175	Rab36	ENSMUST00000142507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020175	Rab36	ENSMUST00000020391	ENSMUSP00000020391	TRANSLATION	protein_coding	stop	-	5	101	12	1.7	0	40.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020175	Rab36	ENSMUST00000139384	ENSMUSP00000118718	TRANSLATION	protein_coding	stop	-	5	134	8	2.42	0	50.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020175	Rab36	ENSMUST00000234625	ENSMUSP00000157124	TRANSLATION	protein_coding	-	CCDS23923.1	-	267	23	5.39	1.5	192.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020175	Rab36	ENSMUST00000147802	ENSMUSP00000119399	TRANSLATION	protein_coding	-	-	5	267	23	5.39	1.5	192.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020175	Rab36	ENSMUST00000146440	ENSMUSP00000121693	TRANSLATION	protein_coding	-	-	5	267	23	5.39	1.5	192.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020175	Rab36	ENSMUST00000122815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020175	Rab36	ENSMUST00000151432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019763	Rmnd1	ENSMUST00000155172	ENSMUSP00000119033	TRANSLATION	protein_coding	stop	-	2	145	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000019763	Rmnd1	ENSMUST00000148566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019763	Rmnd1	ENSMUST00000156940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019763	Rmnd1	ENSMUST00000128434	ENSMUSP00000119195	TRANSLATION	protein_coding	start	-	3	93	0	0	0	43.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019763	Rmnd1	ENSMUST00000137429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019763	Rmnd1	ENSMUST00000126102	ENSMUSP00000114344	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000019763	Rmnd1	ENSMUST00000140660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019763	Rmnd1	ENSMUST00000131853	ENSMUSP00000123418	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000019763	Rmnd1	ENSMUST00000042251	ENSMUSP00000043355	TRANSLATION	protein_coding	-	CCDS56675.1	1	450	0	0	3.9	160.7	0	-2,2	-	-	7	PRINCIPAL:1
ENSMUSG00000071369	Map3k5	ENSMUST00000095806	ENSMUSP00000093485	TRANSLATION	protein_coding	-	CCDS35857.1	1	1380	20	17.01	0.5	740.5	0	-4,-5	-	-	17.766	PRINCIPAL:2
ENSMUSG00000071369	Map3k5	ENSMUST00000120259	ENSMUSP00000112864	TRANSLATION	protein_coding	-	-	1	1372	20	17.01	0	744.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000071369	Map3k5	ENSMUST00000138994	ENSMUSP00000150155	TRANSLATION	non_stop_decay	start/stop	-	3	171	11	3.5	0	104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071369	Map3k5	ENSMUST00000156369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071369	Map3k5	ENSMUST00000129437	ENSMUSP00000114518	TRANSLATION	protein_coding	stop	-	5	144	15	4.08	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071369	Map3k5	ENSMUST00000152533	ENSMUSP00000122553	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	70.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095569	Taar7d	ENSMUST00000092657	ENSMUSP00000090327	TRANSLATION	protein_coding	-	CCDS23742.1	-	358	0	0.48	1.5	188	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046031	Calhm6	ENSMUST00000062784	ENSMUSP00000051575	TRANSLATION	protein_coding	-	CCDS23775.1	1	313	0	0	1.5	306.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000071072	Ptges3	ENSMUST00000052798	ENSMUSP00000050292	TRANSLATION	protein_coding	-	CCDS36087.1	1	160	0	3.75	16.3	40.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000071072	Ptges3	ENSMUST00000084771	ENSMUSP00000081827	TRANSLATION	protein_coding	-	-	5	130	0	2.75	2.4	40.2	0	-4,-5	-	-	10.37	MINOR
ENSMUSG00000071072	Ptges3	ENSMUST00000148943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020081	Tacr2	ENSMUST00000020278	ENSMUSP00000020278	TRANSLATION	protein_coding	-	CCDS35919.1	1	384	0	4.4	4.1	193.1	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020085	Aifm2	ENSMUST00000099706	ENSMUSP00000097297	TRANSLATION	protein_coding	-	CCDS23884.1	1	373	43	4.6	7.5	34.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020085	Aifm2	ENSMUST00000129809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020085	Aifm2	ENSMUST00000140664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020085	Aifm2	ENSMUST00000131361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020085	Aifm2	ENSMUST00000105455	ENSMUSP00000101095	TRANSLATION	protein_coding	-	CCDS23884.1	1	373	43	4.6	7.5	34.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020085	Aifm2	ENSMUST00000080099	ENSMUSP00000078998	TRANSLATION	protein_coding	-	CCDS48576.1	1	380	43	4.24	0.5	34.3	0	-4,-7	-	-	17.28	MINOR
ENSMUSG00000020085	Aifm2	ENSMUST00000067857	ENSMUSP00000070054	TRANSLATION	protein_coding	-	CCDS23884.1	1	373	43	4.6	7.5	34.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020079	Supv3l1	ENSMUST00000161830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020079	Supv3l1	ENSMUST00000162023	ENSMUSP00000137905	TRANSLATION	nonsense_mediated_decay	start	-	1	256	7	4.55	0	0	0	0,4	-	-	-1	MINOR
ENSMUSG00000020079	Supv3l1	ENSMUST00000159042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020079	Supv3l1	ENSMUST00000161941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020079	Supv3l1	ENSMUST00000020273	ENSMUSP00000020273	TRANSLATION	protein_coding	-	CCDS35920.1	1	779	7	14.05	1.5	99.7	0	0,4	-	-	18	PRINCIPAL:1
ENSMUSG00000020061	Mybpc1	ENSMUST00000153964	ENSMUSP00000122472	TRANSLATION	protein_coding	start	-	1	362	0	6.9	0	169.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020061	Mybpc1	ENSMUST00000238199	ENSMUSP00000158844	TRANSLATION	protein_coding	-	-	-	1139	0	21.29	2.4	448	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020061	Mybpc1	ENSMUST00000119185	ENSMUSP00000112699	TRANSLATION	protein_coding	-	CCDS56739.1	1	1127	0	21.29	0.5	448	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020061	Mybpc1	ENSMUST00000148205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020061	Mybpc1	ENSMUST00000156573	ENSMUSP00000119024	TRANSLATION	protein_coding	start/stop	-	5	626	0	11.84	0	253.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020061	Mybpc1	ENSMUST00000124144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020061	Mybpc1	ENSMUST00000121629	ENSMUSP00000112615	TRANSLATION	protein_coding	-	CCDS48666.1	1	1124	0	21.29	2.9	448	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020023	Tmcc3	ENSMUST00000147869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020023	Tmcc3	ENSMUST00000148910	ENSMUSP00000121456	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	57	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020023	Tmcc3	ENSMUST00000132743	ENSMUSP00000119751	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	136.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020023	Tmcc3	ENSMUST00000117929	ENSMUSP00000112401	TRANSLATION	protein_coding	-	CCDS48675.1	1	446	0	0	6.3	523.7	1	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000020023	Tmcc3	ENSMUST00000139230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020023	Tmcc3	ENSMUST00000148823	ENSMUSP00000119496	TRANSLATION	protein_coding	stop	-	2	161	0	0	0	151.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020023	Tmcc3	ENSMUST00000121471	ENSMUSP00000113122	TRANSLATION	protein_coding	-	CCDS48675.1	1	446	0	0	6.3	523.7	1	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000020023	Tmcc3	ENSMUST00000065060	ENSMUSP00000063264	TRANSLATION	protein_coding	-	CCDS24134.1	1	477	0	0	5.1	523.7	1	-4,-5	-	-	7.548	PRINCIPAL:3
ENSMUSG00000020023	Tmcc3	ENSMUST00000117460	ENSMUSP00000112669	TRANSLATION	protein_coding	-	CCDS48675.1	1	446	0	0	6.3	523.7	1	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000039994	Timeless	ENSMUST00000135376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000055539	ENSMUSP00000058021	TRANSLATION	protein_coding	-	CCDS24266.1	1	1197	0	9.85	0.5	880.4	0	-4,-7	-	-	11.868	PRINCIPAL:3
ENSMUSG00000039994	Timeless	ENSMUST00000145710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000105240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039994	Timeless	ENSMUST00000125289	ENSMUSP00000132079	TRANSLATION	protein_coding	stop	-	3	122	0	3.75	0	114.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039994	Timeless	ENSMUST00000105245	ENSMUSP00000100879	TRANSLATION	protein_coding	-	CCDS24266.1	1	1197	0	9.85	0.5	880.4	0	-4,-7	-	-	11.868	PRINCIPAL:3
ENSMUSG00000039994	Timeless	ENSMUST00000146945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039994	Timeless	ENSMUST00000129147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000142484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000105244	ENSMUSP00000100878	TRANSLATION	protein_coding	-	CCDS48724.1	1	1196	0	9.85	0.5	880.3	0	-4,-7	-	-	11.862	ALTERNATIVE:2
ENSMUSG00000039994	Timeless	ENSMUST00000136854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000105243	ENSMUSP00000100877	TRANSLATION	protein_coding	stop	-	5	534	0	7.1	0	268.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039994	Timeless	ENSMUST00000105242	ENSMUSP00000100876	TRANSLATION	protein_coding	-	CCDS48725.1	1	1196	0	9.85	0.5	882.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039994	Timeless	ENSMUST00000135538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039994	Timeless	ENSMUST00000142149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019564	Arid3a	ENSMUST00000105376	ENSMUSP00000101015	TRANSLATION	protein_coding	-	CCDS23999.1	1	601	0	2.75	0.5	72.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000019564	Arid3a	ENSMUST00000131118	ENSMUSP00000114261	TRANSLATION	protein_coding	stop	-	3	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019564	Arid3a	ENSMUST00000105377	ENSMUSP00000101016	TRANSLATION	protein_coding	-	CCDS78851.1	1	599	0	2.75	0.5	72.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000019564	Arid3a	ENSMUST00000135005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019564	Arid3a	ENSMUST00000019708	ENSMUSP00000019708	TRANSLATION	protein_coding	-	CCDS23999.1	1	601	0	2.75	0.5	72.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000078435	AU041133	ENSMUST00000105314	ENSMUSP00000100951	TRANSLATION	protein_coding	start	-	5	497	56	2.05	1.5	330	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078435	AU041133	ENSMUST00000201286	ENSMUSP00000144661	TRANSLATION	protein_coding	-	CCDS78873.1	1	498	56	2.05	1.5	330	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020260	Pofut2	ENSMUST00000217993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020260	Pofut2	ENSMUST00000218064	ENSMUSP00000151864	TRANSLATION	nonsense_mediated_decay	start	-	5	164	0	3.75	0	29.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020260	Pofut2	ENSMUST00000218672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020260	Pofut2	ENSMUST00000020493	ENSMUSP00000020493	TRANSLATION	protein_coding	-	CCDS23954.1	1	429	0	8.75	2.7	236.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020260	Pofut2	ENSMUST00000219376	ENSMUSP00000151877	TRANSLATION	protein_coding	start/stop	-	5	209	0	4.75	0	86.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020260	Pofut2	ENSMUST00000218117	ENSMUSP00000151264	TRANSLATION	protein_coding	start	-	2	170	0	2	0	80	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040258	Nxph4	ENSMUST00000095266	ENSMUSP00000092900	TRANSLATION	protein_coding	-	CCDS36081.1	1	304	0	0	0.5	224.6	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035916	Ptprq	ENSMUST00000218399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035916	Ptprq	ENSMUST00000050702	ENSMUSP00000058572	TRANSLATION	protein_coding	-	CCDS36051.1	2	2300	12	7.696	1.5	700.5	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000044005	Gls2	ENSMUST00000044776	ENSMUSP00000047376	TRANSLATION	protein_coding	-	CCDS24263.1	1	602	10	13.88	7.5	434.3	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000044005	Gls2	ENSMUST00000123385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044005	Gls2	ENSMUST00000134104	ENSMUSP00000123436	TRANSLATION	nonsense_mediated_decay	start	-	1	201	0	3	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044005	Gls2	ENSMUST00000152928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044005	Gls2	ENSMUST00000145591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044005	Gls2	ENSMUST00000159440	ENSMUSP00000124239	TRANSLATION	nonsense_mediated_decay	-	-	1	136	0	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000044005	Gls2	ENSMUST00000134461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044005	Gls2	ENSMUST00000143827	ENSMUSP00000119763	TRANSLATION	nonsense_mediated_decay	-	-	5	186	0	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000044005	Gls2	ENSMUST00000123291	ENSMUSP00000124797	TRANSLATION	protein_coding	stop	-	3	135	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000044005	Gls2	ENSMUST00000135441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044005	Gls2	ENSMUST00000132441	ENSMUSP00000115788	TRANSLATION	protein_coding	start	-	5	176	0	4.1	0	75	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001665	Gstt3	ENSMUST00000174649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001665	Gstt3	ENSMUST00000001715	ENSMUSP00000001715	TRANSLATION	protein_coding	-	CCDS23931.1	1	241	13	5.91	2.9	73.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001665	Gstt3	ENSMUST00000173537	ENSMUSP00000133498	TRANSLATION	protein_coding	-	-	3	200	13	4.31	0	43.8	0	-4,-5	-	-	12.396	MINOR
ENSMUSG00000001665	Gstt3	ENSMUST00000218091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001665	Gstt3	ENSMUST00000133869	ENSMUSP00000134134	TRANSLATION	protein_coding	start	-	3	147	1	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001665	Gstt3	ENSMUST00000174187	ENSMUSP00000133576	TRANSLATION	nonsense_mediated_decay	-	-	5	119	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019846	Lama4	ENSMUST00000161992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000163036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000161303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000159506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000159580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000162211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019846	Lama4	ENSMUST00000019992	ENSMUSP00000019992	TRANSLATION	protein_coding	-	CCDS35882.1	1	1816	0	10.43	2.7	795.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019947	Arid5b	ENSMUST00000218532	ENSMUSP00000151665	TRANSLATION	protein_coding	-	-	1	945	0	3.3	1.2	60.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000019947	Arid5b	ENSMUST00000020106	ENSMUSP00000020106	TRANSLATION	nonsense_mediated_decay	-	-	1	254	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019947	Arid5b	ENSMUST00000218425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019947	Arid5b	ENSMUST00000219238	ENSMUSP00000151227	TRANSLATION	protein_coding	-	CCDS35929.1	1	1188	0	3.3	1.7	60.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000078452	Raet1d	ENSMUST00000095795	ENSMUSP00000093471	TRANSLATION	protein_coding	-	CCDS35866.1	1	249	0	2.8	0.5	355.1	1	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000078452	Raet1d	ENSMUST00000182677	ENSMUSP00000138328	TRANSLATION	protein_coding	-	CCDS35866.1	5	249	0	2.8	0.5	355.1	1	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036478	Btg1	ENSMUST00000218953	ENSMUSP00000151604	TRANSLATION	protein_coding	-	-	2	96	0	1	0	56.3	0	-4,-5	-	-	2.778	MINOR
ENSMUSG00000036478	Btg1	ENSMUST00000038377	ENSMUSP00000038863	TRANSLATION	protein_coding	-	CCDS24140.1	1	171	0	2.75	11.6	146.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000006731	B4galnt1	ENSMUST00000218977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006731	B4galnt1	ENSMUST00000006914	ENSMUSP00000006914	TRANSLATION	protein_coding	-	CCDS24230.1	1	533	12	0	6.3	62.5	0	0,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000006731	B4galnt1	ENSMUST00000217678	ENSMUSP00000151229	TRANSLATION	nonsense_mediated_decay	-	-	1	192	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000006731	B4galnt1	ENSMUST00000219523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006731	B4galnt1	ENSMUST00000220055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009114	2610028H24Rik	ENSMUST00000092406	ENSMUSP00000090061	TRANSLATION	protein_coding	-	CCDS35945.1	1	270	0	0	1.5	102.6	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000009114	2610028H24Rik	ENSMUST00000105415	ENSMUSP00000101055	TRANSLATION	protein_coding	-	-	1	249	0	0	0.5	102.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000055515	Vmn2r81	ENSMUST00000020547	ENSMUSP00000020547	TRANSLATION	protein_coding	-	CCDS23976.1	1	865	4	3.36	0.5	369	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000019936	Epyc	ENSMUST00000020094	ENSMUSP00000020094	TRANSLATION	protein_coding	-	CCDS24143.1	1	322	2	3.16	3.9	45.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000019936	Epyc	ENSMUST00000105285	ENSMUSP00000100922	TRANSLATION	protein_coding	-	CCDS24143.1	1	322	2	3.16	3.9	45.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000010461	Eya4	ENSMUST00000218956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010461	Eya4	ENSMUST00000220299	ENSMUSP00000151287	TRANSLATION	protein_coding	-	CCDS83687.1	1	616	6	7.45	10.3	0	0	-4,-5	-	-	15	MINOR
ENSMUSG00000010461	Eya4	ENSMUST00000219315	ENSMUSP00000151483	TRANSLATION	protein_coding	-	-	5	639	6	7.45	9.3	27.3	0	-4,-5	-	-	20.676	ALTERNATIVE:1
ENSMUSG00000010461	Eya4	ENSMUST00000218867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010461	Eya4	ENSMUST00000092665	ENSMUSP00000090335	TRANSLATION	protein_coding	-	CCDS35867.1	1	616	6	7.45	10.3	27.3	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000010461	Eya4	ENSMUST00000218049	ENSMUSP00000151968	TRANSLATION	protein_coding	stop	-	5	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010461	Eya4	ENSMUST00000074366	ENSMUSP00000073970	TRANSLATION	protein_coding	-	CCDS83687.1	1	616	6	7.45	10.3	0	0	-4,-5	-	-	15	MINOR
ENSMUSG00000010461	Eya4	ENSMUST00000220038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019838	Slc16a10	ENSMUST00000213827	ENSMUSP00000151126	TRANSLATION	protein_coding	start/stop	-	3	184	0	0	0	63.2	9	0,-3	-	-	-1	MINOR
ENSMUSG00000019838	Slc16a10	ENSMUST00000213488	ENSMUSP00000150416	TRANSLATION	protein_coding	-	-	1	320	0	0	0.5	45.9	12	-4,-5	-	-	4.356	MINOR
ENSMUSG00000019838	Slc16a10	ENSMUST00000217252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019838	Slc16a10	ENSMUST00000092566	ENSMUSP00000090227	TRANSLATION	protein_coding	-	CCDS48543.1	1	512	0	0	5.1	59.5	21	-4,-5	-	-	7.646	PRINCIPAL:1
ENSMUSG00000020312	Shc2	ENSMUST00000020564	ENSMUSP00000020564	TRANSLATION	protein_coding	-	CCDS48620.1	5	573	0	6.9	1.5	215.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020312	Shc2	ENSMUST00000168116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020312	Shc2	ENSMUST00000166450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000903	Vpreb3	ENSMUST00000121151	ENSMUSP00000113205	TRANSLATION	protein_coding	-	-	3	130	0	1	0	57.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000000903	Vpreb3	ENSMUST00000000926	ENSMUSP00000000926	TRANSLATION	protein_coding	-	CCDS23940.1	1	123	0	1	3.9	57.5	0	2,-1	-	-	13	PRINCIPAL:2
ENSMUSG00000049109	Themis	ENSMUST00000056097	ENSMUSP00000060129	TRANSLATION	protein_coding	-	CCDS23758.1	1	636	0	0	0.5	353.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000049109	Themis	ENSMUST00000162343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049109	Themis	ENSMUST00000060409	ENSMUSP00000055315	TRANSLATION	protein_coding	-	-	1	605	0	0	0	353.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049109	Themis	ENSMUST00000219119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049109	Themis	ENSMUST00000162202	ENSMUSP00000124451	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049109	Themis	ENSMUST00000159927	ENSMUSP00000123919	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049109	Themis	ENSMUST00000105516	ENSMUSP00000101155	TRANSLATION	protein_coding	-	-	1	595	0	0	0	353.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049109	Themis	ENSMUST00000161345	ENSMUSP00000123894	TRANSLATION	protein_coding	stop	-	3	203	0	0	0	96.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051716	Apon	ENSMUST00000060782	ENSMUSP00000059142	TRANSLATION	protein_coding	-	CCDS24267.1	2	251	0	0	0.5	243.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000051716	Apon	ENSMUST00000218722	ENSMUSP00000151553	TRANSLATION	protein_coding	-	CCDS24267.1	-	251	0	0	0.5	243.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000019927	Ube2d1	ENSMUST00000144231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019927	Ube2d1	ENSMUST00000020085	ENSMUSP00000020085	TRANSLATION	protein_coding	-	CCDS35933.1	1	147	0	4.66	19.5	181.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000019927	Ube2d1	ENSMUST00000144636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020307	Cdc34	ENSMUST00000219389	ENSMUSP00000151998	TRANSLATION	protein_coding	stop	-	2	86	0	2.91	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020307	Cdc34	ENSMUST00000218964	ENSMUSP00000152000	TRANSLATION	protein_coding	start	-	5	159	0	4.99	0	143.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020307	Cdc34	ENSMUST00000217689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020307	Cdc34	ENSMUST00000218938	ENSMUSP00000151880	TRANSLATION	protein_coding	stop	-	3	44	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020307	Cdc34	ENSMUST00000219074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020307	Cdc34	ENSMUST00000220328	ENSMUSP00000151790	TRANSLATION	protein_coding	start	-	3	116	0	2.68	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020307	Cdc34	ENSMUST00000020550	ENSMUSP00000020550	TRANSLATION	protein_coding	-	CCDS23983.1	1	235	0	6.09	12.8	147	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020307	Cdc34	ENSMUST00000220133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020307	Cdc34	ENSMUST00000166603	ENSMUSP00000128806	TRANSLATION	protein_coding	-	CCDS23983.1	1	235	0	6.09	12.8	147	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020307	Cdc34	ENSMUST00000219791	ENSMUSP00000151763	TRANSLATION	protein_coding	-	-	3	190	0	4.51	0.5	112.7	0	-4,-6	-	-	6.78	MINOR
ENSMUSG00000020307	Cdc34	ENSMUST00000219930	ENSMUSP00000151798	TRANSLATION	protein_coding	start	-	3	162	0	4.726	0	145.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090298	Sult3a2	ENSMUST00000223295	ENSMUSP00000152718	TRANSLATION	protein_coding	-	CCDS48533.1	5	293	19	5.4	0.5	261.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090298	Sult3a2	ENSMUST00000165904	ENSMUSP00000127159	TRANSLATION	protein_coding	-	CCDS48533.1	5	293	19	5.4	0.5	261.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000092048	Vmn2r85	ENSMUST00000171811	ENSMUSP00000128792	TRANSLATION	protein_coding	-	CCDS48736.1	5	850	4	2.68	0.5	376.4	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000009293	Ube2g2	ENSMUST00000172772	ENSMUSP00000134397	TRANSLATION	protein_coding	start/stop	-	1	96	0	1.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009293	Ube2g2	ENSMUST00000174546	ENSMUSP00000134208	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009293	Ube2g2	ENSMUST00000174510	ENSMUSP00000133515	TRANSLATION	protein_coding	-	CCDS56722.1	1	165	0	5.25	21.5	164	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009293	Ube2g2	ENSMUST00000173360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009293	Ube2g2	ENSMUST00000172813	ENSMUSP00000134670	TRANSLATION	protein_coding	stop	-	5	71	0	2	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044897	Olfr821	ENSMUST00000054364	ENSMUSP00000056626	TRANSLATION	protein_coding	-	CCDS24346.1	-	310	0	0.48	6.4	168.8	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044897	Olfr821	ENSMUST00000205181	ENSMUSP00000144938	TRANSLATION	protein_coding	-	CCDS24346.1	2	310	0	0.48	6.4	168.8	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044897	Olfr821	ENSMUST00000214177	ENSMUSP00000149027	TRANSLATION	protein_coding	-	CCDS24346.1	5	310	0	0.48	6.4	168.8	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034602	Mon2	ENSMUST00000220201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000219001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000219290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000218735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000219203	ENSMUSP00000151951	TRANSLATION	protein_coding	-	-	1	436	0	1.88	0	423.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000034602	Mon2	ENSMUST00000222536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000219241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000218253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034602	Mon2	ENSMUST00000219515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034602	Mon2	ENSMUST00000037557	ENSMUSP00000037568	TRANSLATION	protein_coding	-	CCDS24216.1	1	1708	0	1.88	1.5	1820.6	0	-4,-5	-	-	11.88	PRINCIPAL:3
ENSMUSG00000034602	Mon2	ENSMUST00000170935	ENSMUSP00000131052	TRANSLATION	protein_coding	-	CCDS48708.1	1	1709	0	1.88	1.5	1820.6	0	-4,-5	-	-	11.88	ALTERNATIVE:2
ENSMUSG00000034602	Mon2	ENSMUST00000073792	ENSMUSP00000073462	TRANSLATION	protein_coding	-	CCDS48707.1	5	1715	0	1.88	0.5	1822.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000062075	Lmnb2	ENSMUST00000179022	ENSMUSP00000136524	TRANSLATION	protein_coding	-	CCDS24037.1	1	596	0	5.86	0.5	383.2	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000062075	Lmnb2	ENSMUST00000057623	ENSMUSP00000057291	TRANSLATION	protein_coding	-	-	1	615	0	5.86	1	383.2	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000062075	Lmnb2	ENSMUST00000105332	ENSMUSP00000100969	TRANSLATION	protein_coding	-	CCDS83733.1	1	474	0	4.62	0.5	231.7	0	-4,-5	-	-	3.522	MINOR
ENSMUSG00000062075	Lmnb2	ENSMUST00000159094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020135	Apc2	ENSMUST00000140828	ENSMUSP00000121324	TRANSLATION	protein_coding	stop	-	1	125	0	1.6	0	112.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020135	Apc2	ENSMUST00000140658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020135	Apc2	ENSMUST00000154212	ENSMUSP00000118171	TRANSLATION	protein_coding	stop	-	2	93	0	1.6	0	112.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020135	Apc2	ENSMUST00000105359	ENSMUSP00000100996	TRANSLATION	protein_coding	-	-	5	2303	0	10.25	0	804.4	0	-2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000020135	Apc2	ENSMUST00000138909	ENSMUSP00000116795	TRANSLATION	protein_coding	stop	-	3	123	0	1.6	0	112.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020135	Apc2	ENSMUST00000020349	ENSMUSP00000020349	TRANSLATION	protein_coding	-	CCDS24016.1	5	2274	0	10.25	0.5	804.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020317	Theg	ENSMUST00000077433	ENSMUSP00000076647	TRANSLATION	protein_coding	-	CCDS23978.1	1	351	0	0	0.5	145.4	0	-4,-5	-	-	5.994	ALTERNATIVE:2
ENSMUSG00000020317	Theg	ENSMUST00000020566	ENSMUSP00000020566	TRANSLATION	protein_coding	-	CCDS23977.1	1	375	0	0	0.5	145.5	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000020317	Theg	ENSMUST00000159782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038876	Rnf146	ENSMUST00000160372	ENSMUSP00000124215	TRANSLATION	protein_coding	-	CCDS48529.1	1	359	8	1.6	5.3	90.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038876	Rnf146	ENSMUST00000162335	ENSMUSP00000124772	TRANSLATION	protein_coding	-	CCDS48529.1	1	359	8	1.6	5.3	90.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038876	Rnf146	ENSMUST00000161508	ENSMUSP00000124814	TRANSLATION	protein_coding	stop	-	2	223	8	1.6	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038876	Rnf146	ENSMUST00000160144	ENSMUSP00000124288	TRANSLATION	protein_coding	-	CCDS48529.1	1	359	8	1.6	5.3	90.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038876	Rnf146	ENSMUST00000214896	ENSMUSP00000149976	TRANSLATION	protein_coding	stop	-	2	168	8	1	0	88.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038876	Rnf146	ENSMUST00000037548	ENSMUSP00000037224	TRANSLATION	protein_coding	-	CCDS48529.1	2	359	8	1.6	5.3	90.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042846	Lrrtm3	ENSMUST00000148712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042846	Lrrtm3	ENSMUST00000133588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042846	Lrrtm3	ENSMUST00000105439	ENSMUSP00000101079	TRANSLATION	protein_coding	-	CCDS35925.1	1	582	0	0.6	12.8	137.9	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000042846	Lrrtm3	ENSMUST00000131945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100950	Taar7f	ENSMUST00000071691	ENSMUSP00000071611	TRANSLATION	protein_coding	-	CCDS23744.1	-	358	0	0.6	1.5	189.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035948	Acss3	ENSMUST00000044668	ENSMUSP00000040823	TRANSLATION	protein_coding	-	CCDS24159.1	1	497	16	7.76	1.5	283.2	0	-3,0	-	-	3.336	MINOR
ENSMUSG00000035948	Acss3	ENSMUST00000165067	ENSMUSP00000128209	TRANSLATION	protein_coding	-	CCDS48688.1	5	682	20	11.835	1.5	421.1	0	-3,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035948	Acss3	ENSMUST00000065567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094347	Olfr784	ENSMUST00000082342	ENSMUSP00000080953	TRANSLATION	protein_coding	-	CCDS24316.1	-	319	0	0.28	2.7	172.8	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094347	Olfr784	ENSMUST00000214064	ENSMUSP00000149354	TRANSLATION	protein_coding	-	CCDS24316.1	5	319	0	0.28	2.7	172.8	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039810	Zc3h10	ENSMUST00000040572	ENSMUSP00000042727	TRANSLATION	protein_coding	-	CCDS24281.1	1	435	12	0.52	7.5	64.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039810	Zc3h10	ENSMUST00000135226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039810	Zc3h10	ENSMUST00000133458	ENSMUSP00000151312	TRANSLATION	protein_coding	stop	-	5	49	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039810	Zc3h10	ENSMUST00000152539	ENSMUSP00000151278	TRANSLATION	protein_coding	stop	-	2	135	8	0.52	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020246	Hcfc2	ENSMUST00000160845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020246	Hcfc2	ENSMUST00000162422	ENSMUSP00000124472	TRANSLATION	nonsense_mediated_decay	start	-	3	145	0	1.606	0	21	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020246	Hcfc2	ENSMUST00000160681	ENSMUSP00000124489	TRANSLATION	protein_coding	start	-	1	261	0	2.864	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020246	Hcfc2	ENSMUST00000020478	ENSMUSP00000020478	TRANSLATION	protein_coding	-	CCDS36014.1	5	722	0	6.788	0.5	79.2	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000069518	Gm10271	ENSMUST00000092165	ENSMUSP00000089803	TRANSLATION	protein_coding	start/stop	-	5	52	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000074639	Rdh16f2	ENSMUST00000092058	ENSMUSP00000089691	TRANSLATION	protein_coding	-	CCDS24254.1	1	318	27	2.44	0.5	144.9	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020034	Tcp11l2	ENSMUST00000162874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020034	Tcp11l2	ENSMUST00000020223	ENSMUSP00000020223	TRANSLATION	protein_coding	-	CCDS36016.1	1	517	0	0	7.5	353.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020034	Tcp11l2	ENSMUST00000160057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038039	Gcc2	ENSMUST00000160416	ENSMUSP00000123873	TRANSLATION	protein_coding	start/stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038039	Gcc2	ENSMUST00000162984	ENSMUSP00000124988	TRANSLATION	nonsense_mediated_decay	-	-	2	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038039	Gcc2	ENSMUST00000160636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038039	Gcc2	ENSMUST00000162041	ENSMUSP00000124787	TRANSLATION	protein_coding	-	-	1	1644	0	1.6	0	185.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038039	Gcc2	ENSMUST00000160677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038039	Gcc2	ENSMUST00000162965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038039	Gcc2	ENSMUST00000161570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038039	Gcc2	ENSMUST00000057659	ENSMUSP00000054033	TRANSLATION	protein_coding	-	CCDS23859.1	1	1680	0	1.6	1.5	185.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000038039	Gcc2	ENSMUST00000162860	ENSMUSP00000124152	TRANSLATION	protein_coding	-	-	5	1576	0	1.6	0	185.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038039	Gcc2	ENSMUST00000160427	ENSMUSP00000124411	TRANSLATION	protein_coding	stop	-	2	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025402	Nab2	ENSMUST00000099157	ENSMUSP00000096761	TRANSLATION	protein_coding	-	CCDS48719.1	1	461	0	1.6	7.5	314	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000025402	Nab2	ENSMUST00000026469	ENSMUSP00000026469	TRANSLATION	protein_coding	-	CCDS24247.1	1	525	0	1.6	7.5	314	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000025402	Nab2	ENSMUST00000128780	ENSMUSP00000121737	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	121.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025402	Nab2	ENSMUST00000129252	ENSMUSP00000118036	TRANSLATION	protein_coding	stop	-	2	46	0	0	0	73.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025395	Prim1	ENSMUST00000135580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025395	Prim1	ENSMUST00000138330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025395	Prim1	ENSMUST00000178041	ENSMUSP00000136556	TRANSLATION	protein_coding	-	-	5	418	4	10.575	5.3	191	0	-4,-5	-	-	17.496	ALTERNATIVE:1
ENSMUSG00000025395	Prim1	ENSMUST00000133285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025395	Prim1	ENSMUST00000026461	ENSMUSP00000026461	TRANSLATION	protein_coding	-	CCDS36086.1	1	417	4	10.775	5.3	192.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035694	Caps2	ENSMUST00000092176	ENSMUSP00000089815	TRANSLATION	protein_coding	-	CCDS78896.1	1	550	6	2.92	0.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035694	Caps2	ENSMUST00000170013	ENSMUSP00000129887	TRANSLATION	protein_coding	-	CCDS24172.2	1	592	6	2.92	0.5	0	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000035694	Caps2	ENSMUST00000132994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039166	Akap7	ENSMUST00000041984	ENSMUSP00000043624	TRANSLATION	protein_coding	-	CCDS23753.1	1	314	6	8.21	0.5	273.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039166	Akap7	ENSMUST00000177124	ENSMUSP00000135137	TRANSLATION	protein_coding	stop	-	2	126	0	2.83	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000039166	Akap7	ENSMUST00000220347	ENSMUSP00000151597	TRANSLATION	protein_coding	start	-	2	95	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039166	Akap7	ENSMUST00000095779	ENSMUSP00000093455	TRANSLATION	protein_coding	-	-	1	122	0	1.96	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039166	Akap7	ENSMUST00000100012	ENSMUSP00000097590	TRANSLATION	protein_coding	-	CCDS83688.1	1	81	0	1	4.1	114	0	-4,-5	-	-	1	MINOR
ENSMUSG00000039166	Akap7	ENSMUST00000175979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039166	Akap7	ENSMUST00000176231	ENSMUSP00000135433	TRANSLATION	protein_coding	stop	-	5	19	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039166	Akap7	ENSMUST00000176258	ENSMUSP00000135037	TRANSLATION	protein_coding	stop	-	3	141	1	3.96	0	76.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004929	Thop1	ENSMUST00000166015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004929	Thop1	ENSMUST00000171484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004929	Thop1	ENSMUST00000166404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004929	Thop1	ENSMUST00000167658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004929	Thop1	ENSMUST00000005057	ENSMUSP00000005057	TRANSLATION	protein_coding	-	CCDS24042.1	1	687	4	12	6.3	537.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006498	Ptbp1	ENSMUST00000168216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006498	Ptbp1	ENSMUST00000171599	ENSMUSP00000131296	TRANSLATION	protein_coding	stop	-	2	113	0	0.924	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000169091	ENSMUSP00000128449	TRANSLATION	protein_coding	start/stop	-	5	107	0	2.594	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000164385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006498	Ptbp1	ENSMUST00000172282	ENSMUSP00000126192	TRANSLATION	protein_coding	-	CCDS35969.1	1	555	0	12.049	2.5	234.3	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000006498	Ptbp1	ENSMUST00000171216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006498	Ptbp1	ENSMUST00000168988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006498	Ptbp1	ENSMUST00000095457	ENSMUSP00000093109	TRANSLATION	protein_coding	-	CCDS70064.1	1	489	0	10.844	0.5	222.5	0	-4,-5	-	-	8.88	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000099958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006498	Ptbp1	ENSMUST00000165153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006498	Ptbp1	ENSMUST00000169483	ENSMUSP00000127507	TRANSLATION	nonsense_mediated_decay	-	-	3	62	0	0.594	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000057343	ENSMUSP00000059481	TRANSLATION	nonsense_mediated_decay	-	-	5	353	0	7.74	0	66	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000168683	ENSMUSP00000132383	TRANSLATION	protein_coding	stop	-	2	55	0	1.358	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000165724	ENSMUSP00000130749	TRANSLATION	nonsense_mediated_decay	start	-	5	162	0	2.861	0	11	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006498	Ptbp1	ENSMUST00000165704	ENSMUSP00000127783	TRANSLATION	protein_coding	-	CCDS35970.1	1	529	0	12.004	0.5	234.3	0	-4,-5	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000006498	Ptbp1	ENSMUST00000169580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020121	Srgap1	ENSMUST00000161996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020121	Srgap1	ENSMUST00000081688	ENSMUSP00000080389	TRANSLATION	protein_coding	-	CCDS36075.1	5	1085	0	15.131	9.5	256.5	0	-4,-5	-	-	14.43	PRINCIPAL:3
ENSMUSG00000020121	Srgap1	ENSMUST00000020322	ENSMUSP00000020322	TRANSLATION	protein_coding	-	CCDS56751.1	1	1062	0	14.491	11.5	256.5	0	-4,-5	-	-	13.722	ALTERNATIVE:1
ENSMUSG00000020121	Srgap1	ENSMUST00000162710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020121	Srgap1	ENSMUST00000161156	ENSMUSP00000125109	TRANSLATION	protein_coding	start	-	3	68	0	1.8	0	55.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049038	Mterf2	ENSMUST00000217027	ENSMUSP00000150699	TRANSLATION	protein_coding	stop	-	3	86	0	0.65	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000049038	Mterf2	ENSMUST00000214193	ENSMUSP00000150091	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000049038	Mterf2	ENSMUST00000214607	ENSMUSP00000150772	TRANSLATION	protein_coding	stop	-	2	70	0	0.2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000049038	Mterf2	ENSMUST00000050813	ENSMUSP00000062762	TRANSLATION	protein_coding	-	CCDS24088.1	1	385	0	1.35	6.3	83.8	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000020051	Pah	ENSMUST00000218573	ENSMUSP00000151849	TRANSLATION	protein_coding	start	-	3	117	10	3.83	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020051	Pah	ENSMUST00000219813	ENSMUSP00000151566	TRANSLATION	protein_coding	-	-	3	81	2	2.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020051	Pah	ENSMUST00000217864	ENSMUSP00000151368	TRANSLATION	protein_coding	stop	-	3	174	8	3.6	0	291.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020051	Pah	ENSMUST00000020241	ENSMUSP00000020241	TRANSLATION	protein_coding	-	CCDS24102.1	1	453	25	12.08	6.3	612.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045193	Cirbp	ENSMUST00000147190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045193	Cirbp	ENSMUST00000139935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045193	Cirbp	ENSMUST00000154726	ENSMUSP00000121214	TRANSLATION	protein_coding	stop	-	2	108	0	3	0	91.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045193	Cirbp	ENSMUST00000140774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045193	Cirbp	ENSMUST00000105365	ENSMUSP00000101004	TRANSLATION	protein_coding	-	CCDS35975.1	1	172	0	3	11.6	91.4	0	-4,-5	-	-	15.752	PRINCIPAL:1
ENSMUSG00000045193	Cirbp	ENSMUST00000054666	ENSMUSP00000052642	TRANSLATION	nonsense_mediated_decay	-	-	2	168	0	3	12.3	91.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045193	Cirbp	ENSMUST00000151321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037031	Tspan15	ENSMUST00000218394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037031	Tspan15	ENSMUST00000218824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037031	Tspan15	ENSMUST00000219106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037031	Tspan15	ENSMUST00000047883	ENSMUSP00000047029	TRANSLATION	protein_coding	-	CCDS56705.1	1	294	0	1.33	1.5	184.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037031	Tspan15	ENSMUST00000220143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019990	Pde7b	ENSMUST00000169404	ENSMUSP00000132378	TRANSLATION	protein_coding	-	CCDS83686.1	5	498	6	8.72	2.7	256.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000019990	Pde7b	ENSMUST00000166147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019990	Pde7b	ENSMUST00000020165	ENSMUSP00000020165	TRANSLATION	protein_coding	-	CCDS35859.1	1	446	6	8.72	2.7	256.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000019990	Pde7b	ENSMUST00000217240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019990	Pde7b	ENSMUST00000164195	ENSMUSP00000126913	TRANSLATION	protein_coding	-	-	5	440	6	7.96	0	229.4	0	-4,-6	-	-	14.874	MINOR
ENSMUSG00000019990	Pde7b	ENSMUST00000169016	ENSMUSP00000130596	TRANSLATION	nonsense_mediated_decay	-	-	1	116	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019990	Pde7b	ENSMUST00000170683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019990	Pde7b	ENSMUST00000170265	ENSMUSP00000126324	TRANSLATION	protein_coding	-	-	5	459	6	8.72	0	256.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020053	Igf1	ENSMUST00000126490	ENSMUSP00000122188	TRANSLATION	protein_coding	stop	-	3	135	0	2	0	58.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000020053	Igf1	ENSMUST00000122386	ENSMUSP00000113905	TRANSLATION	protein_coding	-	CCDS48661.1	1	153	0	2	15	58.5	0	-3,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000020053	Igf1	ENSMUST00000122100	ENSMUSP00000112878	TRANSLATION	protein_coding	-	CCDS48662.1	1	143	0	2	1.5	58.5	0	2,-2	-	-	12.144	MINOR
ENSMUSG00000020053	Igf1	ENSMUST00000095360	ENSMUSP00000093005	TRANSLATION	protein_coding	-	CCDS48661.1	1	153	0	2	15	58.5	0	-3,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000020053	Igf1	ENSMUST00000121161	ENSMUSP00000114120	TRANSLATION	protein_coding	-	CCDS48663.1	1	137	0	2	7.5	58.5	0	2,-2	-	-	13.856	MINOR
ENSMUSG00000020053	Igf1	ENSMUST00000062862	ENSMUSP00000056668	TRANSLATION	protein_coding	-	-	2	165	0	2	0	58.5	0	2,-2	-	-	12	MINOR
ENSMUSG00000020053	Igf1	ENSMUST00000105300	ENSMUSP00000100937	TRANSLATION	protein_coding	-	CCDS24104.2	1	159	0	2	6.3	58.5	0	-3,-4	-	-	13.516	MINOR
ENSMUSG00000020053	Igf1	ENSMUST00000121952	ENSMUSP00000113177	TRANSLATION	protein_coding	-	CCDS48663.1	3	137	0	2	7.5	58.5	0	2,-2	-	-	13.856	MINOR
ENSMUSG00000020123	Avpr1a	ENSMUST00000020323	ENSMUSP00000020323	TRANSLATION	protein_coding	-	CCDS24215.1	1	423	0	1.42	1.5	235.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019979	Apaf1	ENSMUST00000020157	ENSMUSP00000020157	TRANSLATION	protein_coding	-	CCDS36030.1	1	1249	14	26.33	5.1	538.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019979	Apaf1	ENSMUST00000159110	ENSMUSP00000125291	TRANSLATION	protein_coding	-	CCDS36030.1	1	1249	14	26.33	5.1	538.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019979	Apaf1	ENSMUST00000160788	ENSMUSP00000124968	TRANSLATION	protein_coding	-	-	1	258	11	4.33	0	156.5	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000019979	Apaf1	ENSMUST00000161987	ENSMUSP00000124422	TRANSLATION	protein_coding	-	-	1	258	11	4.33	0	156.5	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000019979	Apaf1	ENSMUST00000160725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019979	Apaf1	ENSMUST00000161095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019979	Apaf1	ENSMUST00000162618	ENSMUSP00000124134	TRANSLATION	protein_coding	-	CCDS70095.1	1	1238	14	26	1.7	538.6	0	-4,-5	-	-	17.682	MINOR
ENSMUSG00000019979	Apaf1	ENSMUST00000159457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003348	Mob3a	ENSMUST00000218090	ENSMUSP00000151220	TRANSLATION	protein_coding	stop	-	3	94	2	1	0	85.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003348	Mob3a	ENSMUST00000220138	ENSMUSP00000151405	TRANSLATION	protein_coding	stop	-	3	90	1	1	0	78.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003348	Mob3a	ENSMUST00000218439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003348	Mob3a	ENSMUST00000003438	ENSMUSP00000003438	TRANSLATION	protein_coding	-	CCDS35982.1	1	217	4	3.066	13	275.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000020250	Txnrd1	ENSMUST00000218082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020250	Txnrd1	ENSMUST00000020484	ENSMUSP00000020484	TRANSLATION	protein_coding	-	CCDS24072.1	1	499	53	13	6.3	184.5	0	-4,-5	-	-	19.4	PRINCIPAL:1
ENSMUSG00000020250	Txnrd1	ENSMUST00000219911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020250	Txnrd1	ENSMUST00000218694	ENSMUSP00000151409	TRANSLATION	protein_coding	stop	-	3	164	21	3.75	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020250	Txnrd1	ENSMUST00000219368	ENSMUSP00000151629	TRANSLATION	protein_coding	-	-	1	613	53	13.3	0.5	184.5	0	-4,-6	-	-	18	MINOR
ENSMUSG00000020250	Txnrd1	ENSMUST00000218724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020250	Txnrd1	ENSMUST00000219962	ENSMUSP00000151825	TRANSLATION	protein_coding	-	CCDS24072.1	1	499	53	13	6.3	184.5	0	-4,-5	-	-	19.4	PRINCIPAL:1
ENSMUSG00000020250	Txnrd1	ENSMUST00000219442	ENSMUSP00000152046	TRANSLATION	protein_coding	-	CCDS24072.1	5	499	53	13	6.3	184.5	0	-4,-5	-	-	19.4	PRINCIPAL:1
ENSMUSG00000008398	Elk3	ENSMUST00000008542	ENSMUSP00000008542	TRANSLATION	protein_coding	-	CCDS24124.1	1	409	0	2.4	5.2	117.4	0	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000008398	Elk3	ENSMUST00000129827	ENSMUSP00000122324	TRANSLATION	nonsense_mediated_decay	-	-	5	249	0	1.6	0.5	117.4	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000008398	Elk3	ENSMUST00000151153	ENSMUSP00000121754	TRANSLATION	protein_coding	-	CCDS70097.1	1	142	0	1.8	0.5	94.8	0	-3,-6	-	-	9.144	MINOR
ENSMUSG00000008398	Elk3	ENSMUST00000133365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019932	Kera	ENSMUST00000105286	ENSMUSP00000100923	TRANSLATION	protein_coding	-	CCDS36044.1	1	351	0	1.16	6.3	121.4	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000042801	Olfr769	ENSMUST00000050915	ENSMUSP00000059078	TRANSLATION	protein_coding	-	CCDS24306.1	-	312	0	0.42	8.8	161	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042801	Olfr769	ENSMUST00000215453	ENSMUSP00000149352	TRANSLATION	protein_coding	-	CCDS24306.1	5	312	0	0.42	8.8	161	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042801	Olfr769	ENSMUST00000216906	ENSMUSP00000149008	TRANSLATION	protein_coding	-	CCDS24306.1	5	312	0	0.42	8.8	161	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019856	Fam184a	ENSMUST00000169866	ENSMUSP00000128426	TRANSLATION	protein_coding	-	-	5	166	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000218659	ENSMUSP00000151350	TRANSLATION	nonsense_mediated_decay	start	-	5	278	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000171807	ENSMUSP00000130315	TRANSLATION	protein_coding	start	-	5	690	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000217939	ENSMUSP00000151765	TRANSLATION	protein_coding	start	-	5	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000164393	ENSMUSP00000126220	TRANSLATION	protein_coding	start	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000168949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019856	Fam184a	ENSMUST00000170839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019856	Fam184a	ENSMUST00000163761	ENSMUSP00000127400	TRANSLATION	protein_coding	start	-	5	1003	0	0	0	271	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000020003	ENSMUSP00000020003	TRANSLATION	protein_coding	-	CCDS35901.1	5	1143	0	0	6.3	271	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000019856	Fam184a	ENSMUST00000218682	ENSMUSP00000151789	TRANSLATION	protein_coding	start	-	5	514	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000218780	ENSMUSP00000151298	TRANSLATION	protein_coding	start	-	5	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019856	Fam184a	ENSMUST00000165986	ENSMUSP00000128132	TRANSLATION	nonsense_mediated_decay	start	-	1	372	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020238	Ncln	ENSMUST00000153205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000130400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000118498	ENSMUSP00000112744	TRANSLATION	protein_coding	-	-	5	562	0	0	12.8	44	3	-4,-7	-	-	10	ALTERNATIVE:1
ENSMUSG00000020238	Ncln	ENSMUST00000151680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000151701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000136721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000020463	ENSMUSP00000020463	TRANSLATION	protein_coding	-	CCDS36000.1	1	563	0	0	12.8	44	3	-4,-7	-	-	10	PRINCIPAL:2
ENSMUSG00000020238	Ncln	ENSMUST00000125521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020238	Ncln	ENSMUST00000124437	ENSMUSP00000115235	TRANSLATION	protein_coding	start	-	5	64	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000039760	Il22ra2	ENSMUST00000036564	ENSMUSP00000042642	TRANSLATION	protein_coding	-	CCDS23717.1	1	230	0	4	2.7	203.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019975	Ikbip	ENSMUST00000020149	ENSMUSP00000020149	TRANSLATION	protein_coding	-	CCDS36031.1	1	373	0	0	3.9	0	2	-4,-5	-	-	1.338	MINOR
ENSMUSG00000019975	Ikbip	ENSMUST00000130682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019975	Ikbip	ENSMUST00000020150	ENSMUSP00000020150	TRANSLATION	protein_coding	-	CCDS24119.1	1	345	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000019975	Ikbip	ENSMUST00000135152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019975	Ikbip	ENSMUST00000128371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019975	Ikbip	ENSMUST00000211056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035681	Kcnc2	ENSMUST00000219607	ENSMUSP00000151870	TRANSLATION	protein_coding	start/stop	-	3	198	0	1.11	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000035681	Kcnc2	ENSMUST00000219301	ENSMUSP00000151579	TRANSLATION	protein_coding	-	CCDS24173.1	1	639	0	3.21	1.5	210.4	4	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000035681	Kcnc2	ENSMUST00000218445	ENSMUSP00000151560	TRANSLATION	protein_coding	-	-	1	240	0	1.91	0	52.6	2	-4,-7	-	-	3.402	MINOR
ENSMUSG00000035681	Kcnc2	ENSMUST00000218827	ENSMUSP00000151995	TRANSLATION	protein_coding	start	-	1	138	0	0.36	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035681	Kcnc2	ENSMUST00000092175	ENSMUSP00000089814	TRANSLATION	protein_coding	-	-	1	642	0	3.21	1.5	210.4	4	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034163	Zfc3h1	ENSMUST00000036044	ENSMUSP00000044069	TRANSLATION	protein_coding	-	CCDS36062.1	1	1992	0	0	0.5	33.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034163	Zfc3h1	ENSMUST00000143751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034163	Zfc3h1	ENSMUST00000141246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034163	Zfc3h1	ENSMUST00000127283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052818	Olfr813	ENSMUST00000064893	ENSMUSP00000063431	TRANSLATION	protein_coding	-	CCDS24340.1	-	310	0	0.42	6.4	167.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000052818	Olfr813	ENSMUST00000204622	ENSMUSP00000145260	TRANSLATION	protein_coding	-	CCDS24340.1	5	310	0	0.42	6.4	167.7	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038481	Cdk19	ENSMUST00000044672	ENSMUSP00000040936	TRANSLATION	protein_coding	-	CCDS48545.1	1	501	17	10.25	6.3	209	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038481	Cdk19	ENSMUST00000214659	ENSMUSP00000149435	TRANSLATION	nonsense_mediated_decay	-	-	1	164	15	3.75	0	82.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038481	Cdk19	ENSMUST00000215000	ENSMUSP00000150085	TRANSLATION	nonsense_mediated_decay	-	-	1	44	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038481	Cdk19	ENSMUST00000095743	ENSMUSP00000093414	TRANSLATION	protein_coding	-	CCDS23795.1	1	457	16	8.75	2.9	151	0	-4,-5	-	-	11.57	MINOR
ENSMUSG00000038481	Cdk19	ENSMUST00000216736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040441	Slc26a10	ENSMUST00000221174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040441	Slc26a10	ENSMUST00000220327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040441	Slc26a10	ENSMUST00000238577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040441	Slc26a10	ENSMUST00000222911	ENSMUSP00000152871	TRANSLATION	protein_coding	-	-	5	676	0	5.92	0	398.4	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040441	Slc26a10	ENSMUST00000218658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040441	Slc26a10	ENSMUST00000095270	ENSMUSP00000092904	TRANSLATION	protein_coding	-	CCDS48714.1	5	684	0	5.92	1.5	398.4	7	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000075225	Ccdc162	ENSMUST00000019955	ENSMUSP00000019955	TRANSLATION	protein_coding	-	-	5	258	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075225	Ccdc162	ENSMUST00000160751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075225	Ccdc162	ENSMUST00000190522	ENSMUSP00000150126	TRANSLATION	protein_coding	-	-	5	595	0	0	0	197.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000075225	Ccdc162	ENSMUST00000160002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075225	Ccdc162	ENSMUST00000095227	ENSMUSP00000092852	TRANSLATION	protein_coding	start	-	5	463	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075225	Ccdc162	ENSMUST00000187853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075225	Ccdc162	ENSMUST00000219054	ENSMUSP00000151415	TRANSLATION	protein_coding	start	-	5	912	0	0	0.5	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000075225	Ccdc162	ENSMUST00000159868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075225	Ccdc162	ENSMUST00000159978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075225	Ccdc162	ENSMUST00000099932	ENSMUSP00000097516	TRANSLATION	protein_coding	-	-	5	722	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075225	Ccdc162	ENSMUST00000189488	ENSMUSP00000140774	TRANSLATION	protein_coding	-	-	5	2185	0	0	0.5	197.5	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000025348	Itga7	ENSMUST00000219427	ENSMUSP00000151760	TRANSLATION	protein_coding	start	-	1	128	0	0.61	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025348	Itga7	ENSMUST00000218387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025348	Itga7	ENSMUST00000099112	ENSMUSP00000096712	TRANSLATION	protein_coding	-	CCDS24300.1	2	1136	18	12.075	2.7	489.4	2	-2,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000025348	Itga7	ENSMUST00000218290	ENSMUSP00000151960	TRANSLATION	protein_coding	-	-	1	1140	18	11.875	1.7	489.4	2	-2,-4	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000025348	Itga7	ENSMUST00000219897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095970	Gm19402	ENSMUST00000180297	ENSMUSP00000136066	TRANSLATION	protein_coding	-	CCDS56723.1	-	266	0	0	0.5	62.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050994	Adgb	ENSMUST00000148816	ENSMUSP00000133652	TRANSLATION	nonsense_mediated_decay	start	-	1	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050994	Adgb	ENSMUST00000208717	ENSMUSP00000146658	TRANSLATION	protein_coding	-	-	5	1633	0	0	0	30.9	0	-4,-6	-	-	5.724	ALTERNATIVE:2
ENSMUSG00000050994	Adgb	ENSMUST00000172530	ENSMUSP00000134378	TRANSLATION	protein_coding	-	-	5	1657	0	0	0	30.9	0	-4,-6	-	-	5.724	ALTERNATIVE:2
ENSMUSG00000050994	Adgb	ENSMUST00000179956	ENSMUSP00000136386	TRANSLATION	protein_coding	-	-	5	1660	0	0	0	30.9	0	-4,-6	-	-	5.724	PRINCIPAL:5
ENSMUSG00000050994	Adgb	ENSMUST00000045328	ENSMUSP00000045452	TRANSLATION	protein_coding	-	-	2	356	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000050994	Adgb	ENSMUST00000132573	ENSMUSP00000120422	TRANSLATION	protein_coding	stop	-	5	752	0	0	0	32.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096795	Zfp433	ENSMUST00000085664	ENSMUSP00000082807	TRANSLATION	protein_coding	start	-	5	599	68	3.55	0.5	365.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096795	Zfp433	ENSMUST00000201819	ENSMUSP00000144100	TRANSLATION	protein_coding	stop	-	5	169	14	1.95	0	72.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096795	Zfp433	ENSMUST00000201114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096795	Zfp433	ENSMUST00000200889	ENSMUSP00000144123	TRANSLATION	protein_coding	-	CCDS78872.1	1	600	68	3.55	0.5	365.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004667	Polr2e	ENSMUST00000143438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004667	Polr2e	ENSMUST00000004786	ENSMUSP00000004786	TRANSLATION	protein_coding	-	CCDS35972.1	1	210	0	4.75	16.3	242	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000004667	Polr2e	ENSMUST00000147507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004667	Polr2e	ENSMUST00000131743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004667	Polr2e	ENSMUST00000152843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069662	Marcks	ENSMUST00000092584	ENSMUSP00000090245	TRANSLATION	protein_coding	-	CCDS23784.1	1	309	0	0	0.5	289.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025369	Smarcc2	ENSMUST00000026433	ENSMUSP00000026433	TRANSLATION	protein_coding	-	CCDS24278.1	1	1099	1	3.95	0.5	1019.4	0	-4,-5	-	-	11.358	PRINCIPAL:3
ENSMUSG00000025369	Smarcc2	ENSMUST00000220384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025369	Smarcc2	ENSMUST00000217751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025369	Smarcc2	ENSMUST00000099131	ENSMUSP00000096734	TRANSLATION	protein_coding	-	CCDS48726.1	1	1130	1	4.27	0.5	1019.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025369	Smarcc2	ENSMUST00000218228	ENSMUSP00000151333	TRANSLATION	protein_coding	-	-	5	142	1	0	0	255.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025369	Smarcc2	ENSMUST00000105235	ENSMUSP00000100868	TRANSLATION	protein_coding	-	CCDS48727.1	1	1213	1	3.95	0.5	1019.4	0	-4,-5	-	-	11.358	ALTERNATIVE:2
ENSMUSG00000097550	Gm21304	ENSMUST00000180568	ENSMUSP00000137929	TRANSLATION	protein_coding	-	-	3	261	0	0.8	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000097550	Gm21304	ENSMUST00000181059	ENSMUSP00000137711	TRANSLATION	protein_coding	-	-	2	261	0	0.8	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020184	Mdm2	ENSMUST00000126022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020184	Mdm2	ENSMUST00000151725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020184	Mdm2	ENSMUST00000105263	ENSMUSP00000100898	TRANSLATION	protein_coding	-	CCDS70110.1	5	440	12	3.5	0.5	106.4	0	-4,-5	-	-	14.388	MINOR
ENSMUSG00000020184	Mdm2	ENSMUST00000155285	ENSMUSP00000137039	TRANSLATION	nonsense_mediated_decay	-	-	1	162	0	3.4	0	37.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020184	Mdm2	ENSMUST00000132277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020184	Mdm2	ENSMUST00000020408	ENSMUSP00000020408	TRANSLATION	protein_coding	-	CCDS24194.1	1	489	12	5	0.5	116.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020184	Mdm2	ENSMUST00000137102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020184	Mdm2	ENSMUST00000147823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020184	Mdm2	ENSMUST00000131627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000125730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000151486	ENSMUSP00000116386	TRANSLATION	protein_coding	stop	-	2	43	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019823	Mical1	ENSMUST00000125099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000019967	ENSMUSP00000019967	TRANSLATION	protein_coding	-	CCDS35888.1	1	1048	32	19.55	0.5	196.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000019823	Mical1	ENSMUST00000134010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000099934	ENSMUSP00000097519	TRANSLATION	protein_coding	-	CCDS48547.1	1	975	17	18.55	0.5	176	0	-4,-5	-	-	8.748	MINOR
ENSMUSG00000019823	Mical1	ENSMUST00000136681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000123798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000119962	ENSMUSP00000113783	TRANSLATION	protein_coding	-	-	5	1048	32	19.55	0.5	196.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019823	Mical1	ENSMUST00000138657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019823	Mical1	ENSMUST00000126436	ENSMUSP00000114969	TRANSLATION	nonsense_mediated_decay	-	-	5	939	32	15.72	0	87.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019823	Mical1	ENSMUST00000130838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020310	Madcam1	ENSMUST00000217748	ENSMUSP00000151928	TRANSLATION	protein_coding	-	-	1	261	0	2	0.5	178.9	0	3,-2	-	-	11.874	ALTERNATIVE:2
ENSMUSG00000020310	Madcam1	ENSMUST00000020554	ENSMUSP00000020554	TRANSLATION	protein_coding	-	CCDS23981.1	1	405	0	2	0.5	181	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000038417	Fig4	ENSMUST00000043814	ENSMUSP00000039598	TRANSLATION	protein_coding	-	CCDS23803.1	1	907	0	4.77	11.6	243	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000111273	Olfr789	ENSMUST00000213992	ENSMUSP00000151052	TRANSLATION	protein_coding	-	CCDS83769.1	5	312	0	0.42	7.5	168.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000111273	Olfr789	ENSMUST00000213236	ENSMUSP00000150482	TRANSLATION	protein_coding	-	CCDS83769.1	5	312	0	0.42	7.5	168.1	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019822	Smpd2	ENSMUST00000147367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000019965	ENSMUSP00000019965	TRANSLATION	protein_coding	-	CCDS23805.1	1	419	7	0	5.1	43.3	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000019822	Smpd2	ENSMUST00000155411	ENSMUSP00000115461	TRANSLATION	nonsense_mediated_decay	-	-	3	83	2	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000019822	Smpd2	ENSMUST00000132170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000122997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000143470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000141542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000147738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019822	Smpd2	ENSMUST00000126833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000112814	Gm9040	ENSMUST00000177762	ENSMUSP00000151606	TRANSLATION	protein_coding	-	-	-	802	0	1	15	348.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020074	Ccar1	ENSMUST00000217768	ENSMUSP00000151496	TRANSLATION	protein_coding	stop	-	3	198	0	0	0	106.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020074	Ccar1	ENSMUST00000220236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000218786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020074	Ccar1	ENSMUST00000218437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000219527	ENSMUSP00000151895	TRANSLATION	protein_coding	-	CCDS35922.1	1	1146	0	0	1.5	318	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020074	Ccar1	ENSMUST00000219441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000218945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000218946	ENSMUSP00000151764	TRANSLATION	protein_coding	stop	-	3	161	0	0	0	26.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020074	Ccar1	ENSMUST00000218229	ENSMUSP00000151406	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020074	Ccar1	ENSMUST00000218552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000217940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020074	Ccar1	ENSMUST00000020268	ENSMUSP00000020268	TRANSLATION	protein_coding	-	CCDS35922.1	1	1146	0	0	1.5	318	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060733	Ipmk	ENSMUST00000121446	ENSMUSP00000112568	TRANSLATION	protein_coding	-	CCDS83711.1	5	397	12	2.29	1.5	225.1	0	-4,-6	-	-	17.61	ALTERNATIVE:2
ENSMUSG00000060733	Ipmk	ENSMUST00000147277	ENSMUSP00000120073	TRANSLATION	nonsense_mediated_decay	-	-	1	216	9	2.25	0	104.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060733	Ipmk	ENSMUST00000079252	ENSMUSP00000078240	TRANSLATION	protein_coding	-	CCDS23918.1	1	396	12	2.45	1.5	225.1	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000060733	Ipmk	ENSMUST00000118381	ENSMUSP00000113083	TRANSLATION	protein_coding	-	-	1	216	9	2.25	0	104.6	0	-4,-6	-	-	9.51	MINOR
ENSMUSG00000060733	Ipmk	ENSMUST00000141153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060733	Ipmk	ENSMUST00000145521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060733	Ipmk	ENSMUST00000141984	ENSMUSP00000120612	TRANSLATION	nonsense_mediated_decay	start	-	1	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019813	Cep57l1	ENSMUST00000186239	ENSMUSP00000139509	TRANSLATION	protein_coding	-	CCDS48549.1	1	429	0	1.424	1.5	269.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019813	Cep57l1	ENSMUST00000189770	ENSMUSP00000140147	TRANSLATION	protein_coding	-	CCDS23808.1	1	400	0	1.424	0.5	252.6	0	-4,-5	-	-	10.974	PRINCIPAL:3
ENSMUSG00000019813	Cep57l1	ENSMUST00000189222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019813	Cep57l1	ENSMUST00000190022	ENSMUSP00000141031	TRANSLATION	protein_coding	-	-	1	353	0	1.424	0	176.3	0	-4,-5	-	-	6.396	MINOR
ENSMUSG00000019813	Cep57l1	ENSMUST00000185394	ENSMUSP00000140618	TRANSLATION	protein_coding	start	-	2	71	0	1.064	0	48.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019813	Cep57l1	ENSMUST00000187143	ENSMUSP00000140389	TRANSLATION	protein_coding	-	CCDS23808.1	1	400	0	1.424	0.5	252.6	0	-4,-5	-	-	10.974	PRINCIPAL:3
ENSMUSG00000019813	Cep57l1	ENSMUST00000019951	ENSMUSP00000019951	TRANSLATION	protein_coding	-	CCDS48549.1	5	429	0	1.424	1.5	269.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019813	Cep57l1	ENSMUST00000105505	ENSMUSP00000101144	TRANSLATION	protein_coding	-	CCDS23808.1	5	400	0	1.424	0.5	252.6	0	-4,-5	-	-	10.974	PRINCIPAL:3
ENSMUSG00000019813	Cep57l1	ENSMUST00000188514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019813	Cep57l1	ENSMUST00000191498	ENSMUSP00000141089	TRANSLATION	protein_coding	stop	-	3	235	0	0	0	194.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019813	Cep57l1	ENSMUST00000187935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019813	Cep57l1	ENSMUST00000215496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059602	Syn3	ENSMUST00000139197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059602	Syn3	ENSMUST00000123783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059602	Syn3	ENSMUST00000121789	ENSMUSP00000113408	TRANSLATION	protein_coding	-	CCDS48659.1	1	243	1	4.1	0.5	304	0	-4,-1	-	-	0	MINOR
ENSMUSG00000059602	Syn3	ENSMUST00000143319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059602	Syn3	ENSMUST00000120638	ENSMUSP00000113720	TRANSLATION	protein_coding	-	CCDS24096.1	1	579	22	8.8	7.5	674.8	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000059602	Syn3	ENSMUST00000145864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110353	Gm33543	ENSMUST00000211096	ENSMUSP00000147949	TRANSLATION	protein_coding	-	-	5	81	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:5
ENSMUSG00000110353	Gm33543	ENSMUST00000210336	ENSMUSP00000147540	TRANSLATION	protein_coding	-	-	5	59	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000110353	Gm33543	ENSMUST00000209662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093674	Rpl41	ENSMUST00000176010	ENSMUSP00000135533	TRANSLATION	protein_coding	-	CCDS56753.1	1	25	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000093674	Rpl41	ENSMUST00000176966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093674	Rpl41	ENSMUST00000177163	ENSMUSP00000134737	TRANSLATION	protein_coding	-	CCDS56753.1	1	25	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000093674	Rpl41	ENSMUST00000176184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093674	Rpl41	ENSMUST00000176906	ENSMUSP00000135298	TRANSLATION	protein_coding	-	-	3	46	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000093674	Rpl41	ENSMUST00000176683	ENSMUSP00000135158	TRANSLATION	protein_coding	-	CCDS56753.1	2	25	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000093674	Rpl41	ENSMUST00000177513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025358	Cdk2	ENSMUST00000026415	ENSMUSP00000026415	TRANSLATION	protein_coding	-	CCDS24288.1	1	298	19	6.75	13.7	265.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025358	Cdk2	ENSMUST00000219983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025358	Cdk2	ENSMUST00000219099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025358	Cdk2	ENSMUST00000219601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025358	Cdk2	ENSMUST00000220407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025358	Cdk2	ENSMUST00000026416	ENSMUSP00000026416	TRANSLATION	protein_coding	-	CCDS24289.1	1	346	19	6.25	7.5	245.8	0	-4,-5	-	-	17.846	MINOR
ENSMUSG00000025358	Cdk2	ENSMUST00000219047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020100	Slc29a3	ENSMUST00000144989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020100	Slc29a3	ENSMUST00000117513	ENSMUSP00000112685	TRANSLATION	protein_coding	-	CCDS48571.1	1	475	0	0	2.7	201	12	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020100	Slc29a3	ENSMUST00000119595	ENSMUSP00000112426	TRANSLATION	protein_coding	-	-	1	206	0	0	0	0	5	-4,-5	-	-	0	MINOR
ENSMUSG00000020100	Slc29a3	ENSMUST00000150845	ENSMUSP00000119716	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000020100	Slc29a3	ENSMUST00000127386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045111	Taar6	ENSMUST00000057080	ENSMUSP00000097603	TRANSLATION	protein_coding	-	CCDS23739.1	-	345	0	0.48	6.4	189.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000058799	Nap1l1	ENSMUST00000065917	ENSMUSP00000070068	TRANSLATION	protein_coding	-	CCDS36058.1	1	391	0	5.714	7.5	367.6	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000058799	Nap1l1	ENSMUST00000219961	ENSMUSP00000151700	TRANSLATION	protein_coding	-	-	1	383	0	5.714	5.8	367.6	0	-4,-5	-	-	14.214	ALTERNATIVE:1
ENSMUSG00000058799	Nap1l1	ENSMUST00000218828	ENSMUSP00000151972	TRANSLATION	protein_coding	-	CCDS36058.1	1	391	0	5.714	7.5	367.6	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000058799	Nap1l1	ENSMUST00000219718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058799	Nap1l1	ENSMUST00000217908	ENSMUSP00000151750	TRANSLATION	protein_coding	-	CCDS36058.1	1	391	0	5.714	7.5	367.6	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000058799	Nap1l1	ENSMUST00000218982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058799	Nap1l1	ENSMUST00000219143	ENSMUSP00000151507	TRANSLATION	protein_coding	-	-	1	368	0	5.714	0	367.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000002147	Stat6	ENSMUST00000120279	ENSMUSP00000112722	TRANSLATION	protein_coding	stop	-	2	113	0	1.85	0	50.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002147	Stat6	ENSMUST00000128072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002147	Stat6	ENSMUST00000092074	ENSMUSP00000089708	TRANSLATION	protein_coding	-	CCDS36082.1	1	837	0	14.2	1.5	749.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002147	Stat6	ENSMUST00000156231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002147	Stat6	ENSMUST00000145470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063428	Ddo	ENSMUST00000213503	ENSMUSP00000151066	TRANSLATION	protein_coding	-	-	1	174	21	3.025	0.5	48.5	0	0,-3	-	-	6.33	MINOR
ENSMUSG00000063428	Ddo	ENSMUST00000214102	ENSMUSP00000149767	TRANSLATION	protein_coding	-	-	3	167	18	2.86	0.5	45.9	0	0,-3	-	-	5.844	MINOR
ENSMUSG00000063428	Ddo	ENSMUST00000214618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063428	Ddo	ENSMUST00000213856	ENSMUSP00000150785	TRANSLATION	nonsense_mediated_decay	-	-	1	82	18	0.7	0	35.6	0	0,-3	-	-	-1	MINOR
ENSMUSG00000063428	Ddo	ENSMUST00000216830	ENSMUSP00000150979	TRANSLATION	protein_coding	-	-	1	158	18	3.025	0.5	49.3	0	0,-3	-	-	6.378	MINOR
ENSMUSG00000063428	Ddo	ENSMUST00000213442	ENSMUSP00000149768	TRANSLATION	protein_coding	-	-	1	182	18	3.025	0.5	47.1	0	0,-3	-	-	6.246	MINOR
ENSMUSG00000063428	Ddo	ENSMUST00000019977	ENSMUSP00000019977	TRANSLATION	protein_coding	-	CCDS23798.1	1	341	38	3.665	2.7	121.7	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000050953	Gja1	ENSMUST00000220069	ENSMUSP00000151620	TRANSLATION	protein_coding	-	CCDS23851.1	1	382	0	2.5	12.8	351.8	4	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050953	Gja1	ENSMUST00000217789	ENSMUSP00000151596	TRANSLATION	protein_coding	stop	-	1	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050953	Gja1	ENSMUST00000218760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050953	Gja1	ENSMUST00000220194	ENSMUSP00000151603	TRANSLATION	protein_coding	stop	-	1	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050953	Gja1	ENSMUST00000218834	ENSMUSP00000151647	TRANSLATION	protein_coding	stop	-	1	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050953	Gja1	ENSMUST00000220204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050953	Gja1	ENSMUST00000068581	ENSMUSP00000064536	TRANSLATION	protein_coding	-	CCDS23851.1	1	382	0	2.5	12.8	351.8	4	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050953	Gja1	ENSMUST00000218444	ENSMUSP00000151974	TRANSLATION	protein_coding	stop	-	3	57	0	1.5	0	73.8	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000096220	Olfr775	ENSMUST00000097163	ENSMUSP00000132845	TRANSLATION	protein_coding	-	CCDS48733.1	-	312	0	0.28	7.5	174.5	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000096220	Olfr775	ENSMUST00000214109	ENSMUSP00000150345	TRANSLATION	protein_coding	-	CCDS48733.1	5	312	0	0.28	7.5	174.5	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000097427	Gm6763	ENSMUST00000180692	ENSMUSP00000137740	TRANSLATION	protein_coding	stop	-	3	146	0	1	0	61.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000097427	Gm6763	ENSMUST00000181287	ENSMUSP00000137957	TRANSLATION	protein_coding	-	CCDS78890.1	2	264	0	1.2	0.5	96.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035673	Sbno2	ENSMUST00000217972	ENSMUSP00000151449	TRANSLATION	protein_coding	-	-	2	736	11	0	0	439.8	0	-4,-6	-	-	6	MINOR
ENSMUSG00000035673	Sbno2	ENSMUST00000219258	ENSMUSP00000151835	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035673	Sbno2	ENSMUST00000218630	ENSMUSP00000151854	TRANSLATION	protein_coding	stop	-	1	1230	11	0	0	830.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035673	Sbno2	ENSMUST00000042771	ENSMUSP00000041635	TRANSLATION	protein_coding	-	CCDS24008.1	5	1349	11	0	1.5	830.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035673	Sbno2	ENSMUST00000219260	ENSMUSP00000151590	TRANSLATION	protein_coding	-	CCDS24008.1	5	1349	11	0	1.5	830.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035673	Sbno2	ENSMUST00000218462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035673	Sbno2	ENSMUST00000217876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035673	Sbno2	ENSMUST00000217683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035673	Sbno2	ENSMUST00000218310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058071	Olfr818	ENSMUST00000215527	ENSMUSP00000149259	TRANSLATION	protein_coding	-	CCDS24344.1	5	318	0	1.14	2.7	160.9	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058071	Olfr818	ENSMUST00000074308	ENSMUSP00000073918	TRANSLATION	protein_coding	-	CCDS24344.1	-	318	0	1.14	2.7	160.9	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058071	Olfr818	ENSMUST00000205227	ENSMUSP00000145108	TRANSLATION	protein_coding	stop	-	3	123	0	0.2	0	84.6	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000056148	Rdh9	ENSMUST00000136223	ENSMUSP00000120523	TRANSLATION	protein_coding	-	-	1	120	10	0.6	0	37.9	0	1,-2	-	-	1.626	MINOR
ENSMUSG00000056148	Rdh9	ENSMUST00000128133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056148	Rdh9	ENSMUST00000052652	ENSMUSP00000057732	TRANSLATION	protein_coding	-	CCDS24251.1	1	317	27	2.4	1.5	135.8	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039878	Slc39a5	ENSMUST00000167859	ENSMUSP00000131736	TRANSLATION	protein_coding	-	CCDS24275.1	1	535	0	0	3.9	239	4	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000039878	Slc39a5	ENSMUST00000042666	ENSMUSP00000037753	TRANSLATION	protein_coding	-	CCDS24275.1	1	535	0	0	3.9	239	4	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000039878	Slc39a5	ENSMUST00000218858	ENSMUSP00000151742	TRANSLATION	protein_coding	stop	-	5	114	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000039878	Slc39a5	ENSMUST00000219131	ENSMUSP00000151727	TRANSLATION	protein_coding	stop	-	5	176	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000039878	Slc39a5	ENSMUST00000219222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037455	Slc18b1	ENSMUST00000134170	ENSMUSP00000116940	TRANSLATION	nonsense_mediated_decay	-	-	3	130	0	0	0	33	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000037455	Slc18b1	ENSMUST00000133289	ENSMUSP00000121289	TRANSLATION	protein_coding	stop	-	1	142	0	0	0	33	5	0,-3	-	-	-1	MINOR
ENSMUSG00000037455	Slc18b1	ENSMUST00000179321	ENSMUSP00000137431	TRANSLATION	protein_coding	-	-	5	459	0	0	1.5	118	17	-4,-5	-	-	3.12	MINOR
ENSMUSG00000037455	Slc18b1	ENSMUST00000119597	ENSMUSP00000112634	TRANSLATION	protein_coding	-	CCDS48521.1	5	457	0	0	1.5	166	17	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037455	Slc18b1	ENSMUST00000143931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037455	Slc18b1	ENSMUST00000127841	ENSMUSP00000123468	TRANSLATION	nonsense_mediated_decay	start	-	1	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035595	Fam174c	ENSMUST00000041882	ENSMUSP00000037758	TRANSLATION	protein_coding	-	CCDS24012.1	1	108	0	0	0.5	36.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000094120	Gm3233	ENSMUST00000168997	ENSMUSP00000129915	TRANSLATION	protein_coding	-	-	-	230	0	0	0.5	51	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019779	Frk	ENSMUST00000215144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019779	Frk	ENSMUST00000215594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019779	Frk	ENSMUST00000170771	ENSMUSP00000130289	TRANSLATION	protein_coding	-	CCDS23781.1	1	512	17	7.08	0.5	462.4	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000019779	Frk	ENSMUST00000019913	ENSMUSP00000019913	TRANSLATION	protein_coding	-	CCDS23781.1	1	512	17	7.08	0.5	462.4	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020007	Il20ra	ENSMUST00000020185	ENSMUSP00000020185	TRANSLATION	protein_coding	-	CCDS23718.1	1	546	0	4	1.5	179.9	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020007	Il20ra	ENSMUST00000217389	ENSMUSP00000150417	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	1	0	52.1	0	3,-1	-	-	-1	MINOR
ENSMUSG00000039485	Tspyl4	ENSMUST00000047935	ENSMUSP00000036360	TRANSLATION	protein_coding	-	CCDS23778.1	-	406	0	0.4	0.5	73.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039485	Tspyl4	ENSMUST00000213791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005682	Pan2	ENSMUST00000219721	ENSMUSP00000151874	TRANSLATION	protein_coding	-	-	1	1173	4	10.765	0.5	113.2	0	-4,-5	-	-	14.998	ALTERNATIVE:2
ENSMUSG00000005682	Pan2	ENSMUST00000005825	ENSMUSP00000005825	TRANSLATION	protein_coding	-	CCDS24271.1	1	1200	4	11.1	1.5	113	0	-4,-5	-	-	15.658	PRINCIPAL:2
ENSMUSG00000005682	Pan2	ENSMUST00000218315	ENSMUSP00000151216	TRANSLATION	protein_coding	-	-	1	1191	4	11.265	1.5	113.2	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000005682	Pan2	ENSMUST00000219801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005682	Pan2	ENSMUST00000218496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005682	Pan2	ENSMUST00000218137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005682	Pan2	ENSMUST00000219255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058396	Gpr182	ENSMUST00000079692	ENSMUSP00000100882	TRANSLATION	protein_coding	-	CCDS36084.1	1	398	0	0.6	1.5	137.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000110723	Gm49353	ENSMUST00000217011	ENSMUSP00000152743	TRANSLATION	protein_coding,RT	start	-	3	33	0	0	0	0	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000038774	Ascc3	ENSMUST00000220355	ENSMUSP00000151273	TRANSLATION	protein_coding	stop	-	5	334	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038774	Ascc3	ENSMUST00000220026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038774	Ascc3	ENSMUST00000217725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038774	Ascc3	ENSMUST00000220178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038774	Ascc3	ENSMUST00000219226	ENSMUSP00000151983	TRANSLATION	protein_coding	-	-	5	48	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000038774	Ascc3	ENSMUST00000219172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038774	Ascc3	ENSMUST00000217968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038774	Ascc3	ENSMUST00000219085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038774	Ascc3	ENSMUST00000035606	ENSMUSP00000036726	TRANSLATION	protein_coding	-	CCDS48555.1	5	2198	21	29.99	0.5	739	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050108	Bpifc	ENSMUST00000105304	ENSMUSP00000100941	TRANSLATION	protein_coding	-	-	5	82	0	1.2	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000050108	Bpifc	ENSMUST00000061699	ENSMUSP00000063107	TRANSLATION	protein_coding	-	CCDS48658.1	1	507	0	7.38	1.5	262.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025374	Nabp2	ENSMUST00000171370	ENSMUSP00000127436	TRANSLATION	protein_coding	stop	-	3	56	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000171494	ENSMUSP00000126842	TRANSLATION	protein_coding	stop	-	3	65	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000166608	ENSMUSP00000131171	TRANSLATION	protein_coding	-	-	5	228	0	5.34	1.2	29.3	0	-4,-5	-	-	12.072	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000164664	ENSMUSP00000127605	TRANSLATION	protein_coding	stop	-	5	151	0	4.34	0	29.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000172348	ENSMUSP00000127015	TRANSLATION	protein_coding	stop	-	3	154	0	4.34	0	29.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000172238	ENSMUSP00000130608	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025374	Nabp2	ENSMUST00000026439	ENSMUSP00000026439	TRANSLATION	protein_coding	-	CCDS24276.1	1	212	0	5.34	9.5	29.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025374	Nabp2	ENSMUST00000167456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025374	Nabp2	ENSMUST00000164199	ENSMUSP00000128634	TRANSLATION	protein_coding	-	CCDS24276.1	1	212	0	5.34	9.5	29.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071392	Ect2l	ENSMUST00000095817	ENSMUSP00000093497	TRANSLATION	protein_coding	-	CCDS56693.1	5	911	0	5.75	0.5	196.7	0	-4,-5	-	-	11.4	PRINCIPAL:2
ENSMUSG00000071392	Ect2l	ENSMUST00000215232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071392	Ect2l	ENSMUST00000216336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071392	Ect2l	ENSMUST00000207148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071392	Ect2l	ENSMUST00000208948	ENSMUSP00000146899	TRANSLATION	protein_coding	-	-	5	953	0	6.05	0.5	196.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071392	Ect2l	ENSMUST00000207827	ENSMUSP00000146490	TRANSLATION	protein_coding	-	-	5	909	0	5.75	0.5	196.7	0	-4,-5	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000071392	Ect2l	ENSMUST00000209178	ENSMUSP00000147170	TRANSLATION	protein_coding	-	-	5	861	0	5.25	0	170.4	0	-4,-5	-	-	8.82	MINOR
ENSMUSG00000046041	Olfr803	ENSMUST00000056736	ENSMUSP00000055860	TRANSLATION	protein_coding	-	CCDS24330.1	-	308	0	0.28	7.5	171.9	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046041	Olfr803	ENSMUST00000204641	ENSMUSP00000145400	TRANSLATION	protein_coding	-	CCDS24330.1	5	308	0	0.28	7.5	171.9	5	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025347	Mettl7b	ENSMUST00000026398	ENSMUSP00000026398	TRANSLATION	protein_coding	-	CCDS24301.1	1	244	17	0.78	1.8	74.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000074781	Ube2n	ENSMUST00000219741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074781	Ube2n	ENSMUST00000220428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074781	Ube2n	ENSMUST00000099329	ENSMUSP00000096932	TRANSLATION	protein_coding	-	CCDS48677.1	1	152	0	3.83	21.5	161.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000074781	Ube2n	ENSMUST00000219381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074781	Ube2n	ENSMUST00000220127	ENSMUSP00000151850	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	1.53	0	55.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074781	Ube2n	ENSMUST00000217757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064065	Ipcef1	ENSMUST00000144622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064065	Ipcef1	ENSMUST00000154998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064065	Ipcef1	ENSMUST00000086896	ENSMUSP00000084110	TRANSLATION	protein_coding	-	CCDS56689.1	1	242	1	2.49	0.5	0	0	-4,-5	-	-	4.668	MINOR
ENSMUSG00000064065	Ipcef1	ENSMUST00000149708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064065	Ipcef1	ENSMUST00000105617	ENSMUSP00000101242	TRANSLATION	protein_coding	-	CCDS56688.1	5	406	9	3.49	1.5	60.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000064065	Ipcef1	ENSMUST00000170680	ENSMUSP00000128131	TRANSLATION	protein_coding	-	CCDS56689.1	5	242	1	2.49	0.5	0	0	-4,-5	-	-	4.668	MINOR
ENSMUSG00000064065	Ipcef1	ENSMUST00000078070	ENSMUSP00000077215	TRANSLATION	protein_coding	-	CCDS83676.1	1	410	9	3.49	1.5	60.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000064065	Ipcef1	ENSMUST00000151960	ENSMUSP00000118510	TRANSLATION	protein_coding	stop	-	3	98	9	1.75	0	37.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064065	Ipcef1	ENSMUST00000145156	ENSMUSP00000114267	TRANSLATION	protein_coding	stop	-	5	258	9	3.49	0	60.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035206	Sppl2b	ENSMUST00000035597	ENSMUSP00000036289	TRANSLATION	protein_coding	-	CCDS35988.1	1	578	0	0	0.5	323.7	18	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000035206	Sppl2b	ENSMUST00000218789	ENSMUSP00000152014	TRANSLATION	protein_coding	start	-	1	374	0	0	0	286.6	18	-4,-2	-	-	-1	MINOR
ENSMUSG00000035206	Sppl2b	ENSMUST00000218812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035206	Sppl2b	ENSMUST00000218007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035206	Sppl2b	ENSMUST00000218727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035206	Sppl2b	ENSMUST00000220091	ENSMUSP00000151737	TRANSLATION	protein_coding	-	-	1	266	0	0	0	141.9	15	-4,-7	-	-	0	MINOR
ENSMUSG00000035206	Sppl2b	ENSMUST00000219951	ENSMUSP00000151420	TRANSLATION	protein_coding	start/stop	-	3	239	0	0	0	237	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000035206	Sppl2b	ENSMUST00000219366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035206	Sppl2b	ENSMUST00000219614	ENSMUSP00000151531	TRANSLATION	protein_coding	start/stop	-	5	259	0	0	0	129	12	-4,-7	-	-	-1	MINOR
ENSMUSG00000035206	Sppl2b	ENSMUST00000217714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035206	Sppl2b	ENSMUST00000219136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020087	Tysnd1	ENSMUST00000020284	ENSMUSP00000020284	TRANSLATION	protein_coding	-	CCDS48575.1	1	568	5	2.696	3.9	73.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020087	Tysnd1	ENSMUST00000218280	ENSMUSP00000151511	TRANSLATION	protein_coding	start	-	3	142	1	0.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020087	Tysnd1	ENSMUST00000219768	ENSMUSP00000151532	TRANSLATION	protein_coding	start/stop	-	5	102	1	0.45	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020087	Tysnd1	ENSMUST00000218135	ENSMUSP00000151548	TRANSLATION	protein_coding	start/stop	-	3	198	2	0.996	0	30.2	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000019868	Vta1	ENSMUST00000154132	ENSMUSP00000119829	TRANSLATION	protein_coding	-	CCDS23705.1	1	309	0	6.32	0.5	170.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019868	Vta1	ENSMUST00000156398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019868	Vta1	ENSMUST00000133927	ENSMUSP00000119958	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019868	Vta1	ENSMUST00000151805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019868	Vta1	ENSMUST00000149485	ENSMUSP00000118498	TRANSLATION	protein_coding	start/stop	-	3	251	0	5.11	0	170.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019868	Vta1	ENSMUST00000020018	ENSMUSP00000020018	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069430	Olfr9	ENSMUST00000091996	ENSMUSP00000089622	TRANSLATION	protein_coding	-	CCDS24302.1	-	312	0	0.2	2.7	160.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020231	Dip2a	ENSMUST00000159486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020231	Dip2a	ENSMUST00000159807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020231	Dip2a	ENSMUST00000105417	ENSMUSP00000101057	TRANSLATION	protein_coding	-	-	5	1572	0	15.085	1	423.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020231	Dip2a	ENSMUST00000036033	ENSMUSP00000043710	TRANSLATION	protein_coding	-	CCDS35944.2	5	1562	0	15.085	0.5	423.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000020231	Dip2a	ENSMUST00000162524	ENSMUSP00000125614	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020231	Dip2a	ENSMUST00000160048	ENSMUSP00000125184	TRANSLATION	protein_coding	-	-	5	1523	0	15.085	0	372.5	0	-4,-6	-	-	8.952	MINOR
ENSMUSG00000020231	Dip2a	ENSMUST00000162766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020231	Dip2a	ENSMUST00000160442	ENSMUSP00000125744	TRANSLATION	nonsense_mediated_decay	start	-	3	157	0	0.68	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020090	Npffr1	ENSMUST00000020287	ENSMUSP00000020287	TRANSLATION	protein_coding	-	CCDS48574.1	5	432	0	2.22	1.5	186.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037424	Taar9	ENSMUST00000041180	ENSMUSP00000043552	TRANSLATION	protein_coding	-	CCDS23748.1	-	348	0	0.56	0.5	198.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059862	Olfr826	ENSMUST00000203720	ENSMUSP00000144755	TRANSLATION	protein_coding	-	CCDS24351.1	5	313	0	0	3.9	176.6	5	-3,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000059862	Olfr826	ENSMUST00000216661	ENSMUSP00000149119	TRANSLATION	protein_coding	-	CCDS24351.1	3	313	0	0	3.9	176.6	5	-3,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000059862	Olfr826	ENSMUST00000078322	ENSMUSP00000077436	TRANSLATION	protein_coding	-	CCDS24351.1	-	313	0	0	3.9	176.6	5	-3,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000001785	Pwp1	ENSMUST00000001836	ENSMUSP00000001836	TRANSLATION	protein_coding	-	CCDS24092.1	1	501	0	5.87	7.5	44.5	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000001785	Pwp1	ENSMUST00000217667	ENSMUSP00000152025	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000001785	Pwp1	ENSMUST00000219256	ENSMUSP00000151813	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000001785	Pwp1	ENSMUST00000219902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001785	Pwp1	ENSMUST00000219626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094632	Gm10310	ENSMUST00000213667	ENSMUSP00000150490	TRANSLATION	protein_coding	-	-	5	314	0	0.36	1.7	186.1	8	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000094632	Gm10310	ENSMUST00000095239	ENSMUSP00000092867	TRANSLATION	protein_coding	-	-	-	320	0	0.36	2.7	186.1	8	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000020190	Mknk2	ENSMUST00000197276	ENSMUSP00000143679	TRANSLATION	protein_coding	stop	-	3	118	8	2.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020190	Mknk2	ENSMUST00000003433	ENSMUSP00000003433	TRANSLATION	protein_coding	-	-	1	412	21	8.42	1.7	221.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020190	Mknk2	ENSMUST00000199949	ENSMUSP00000143655	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020190	Mknk2	ENSMUST00000200082	ENSMUSP00000143508	TRANSLATION	protein_coding	-	CCDS24030.2	1	459	21	8.42	2.7	221.1	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000020190	Mknk2	ENSMUST00000198819	ENSMUSP00000142388	TRANSLATION	protein_coding	stop	-	5	49	4	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071317	Bves	ENSMUST00000213557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071317	Bves	ENSMUST00000095715	ENSMUSP00000093382	TRANSLATION	protein_coding	-	CCDS23828.1	1	358	0	0	6.5	152.7	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000094734	Olfr799	ENSMUST00000214182	ENSMUSP00000149485	TRANSLATION	protein_coding	-	CCDS24326.1	5	311	0	0.42	6.3	155.5	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094734	Olfr799	ENSMUST00000213820	ENSMUSP00000149826	TRANSLATION	protein_coding	-	CCDS24326.1	5	311	0	0.42	6.3	155.5	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094734	Olfr799	ENSMUST00000071126	ENSMUSP00000071126	TRANSLATION	protein_coding	-	CCDS24326.1	-	311	0	0.42	6.3	155.5	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094734	Olfr799	ENSMUST00000217364	ENSMUSP00000150406	TRANSLATION	protein_coding	-	CCDS24326.1	5	311	0	0.42	6.3	155.5	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094734	Olfr799	ENSMUST00000216446	ENSMUSP00000151080	TRANSLATION	protein_coding	-	CCDS24326.1	5	311	0	0.42	6.3	155.5	5	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000047025	Ccer1	ENSMUST00000060703	ENSMUSP00000050554	TRANSLATION	protein_coding	-	CCDS24144.1	-	403	0	0	0.5	396.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032763	Ilvbl	ENSMUST00000220430	ENSMUSP00000151674	TRANSLATION	protein_coding	-	-	1	416	10	6.34	0	226.6	4	0,-3	-	-	0.108	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000218670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032763	Ilvbl	ENSMUST00000218875	ENSMUSP00000151521	TRANSLATION	protein_coding	-	-	1	531	17	8.33	0	256.9	4	0,-3	-	-	4.266	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000218763	ENSMUSP00000151301	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000218061	ENSMUSP00000151470	TRANSLATION	protein_coding	stop	-	2	79	3	0.32	0	0	4	0,-3	-	-	-1	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000218787	ENSMUSP00000151300	TRANSLATION	protein_coding	stop	-	2	125	8	2.32	0	74.5	4	0,-3	-	-	-1	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000218885	ENSMUSP00000151263	TRANSLATION	protein_coding	-	CCDS23966.1	1	632	28	10.16	7.5	324.8	4	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000032763	Ilvbl	ENSMUST00000105384	ENSMUSP00000101023	TRANSLATION	protein_coding	-	CCDS23966.1	1	632	28	10.16	7.5	324.8	4	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000032763	Ilvbl	ENSMUST00000218271	ENSMUSP00000151480	TRANSLATION	protein_coding	-	-	1	401	10	6.34	0.5	226.6	4	0,-3	-	-	0.108	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000219971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032763	Ilvbl	ENSMUST00000218215	ENSMUSP00000152037	TRANSLATION	protein_coding	-	-	1	596	28	9.995	0	307.2	4	0,-3	-	-	16.614	MINOR
ENSMUSG00000032763	Ilvbl	ENSMUST00000219588	ENSMUSP00000151967	TRANSLATION	protein_coding	start	-	1	328	1	4.62	0	132.9	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000069539	Scyl2	ENSMUST00000174252	ENSMUSP00000133992	TRANSLATION	protein_coding	-	CCDS36027.1	1	930	0	3.43	6.3	86.6	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000069539	Scyl2	ENSMUST00000174429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069539	Scyl2	ENSMUST00000174492	ENSMUSP00000134366	TRANSLATION	protein_coding	start	-	1	274	0	1.41	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000069539	Scyl2	ENSMUST00000174575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069539	Scyl2	ENSMUST00000092227	ENSMUSP00000089874	TRANSLATION	protein_coding	-	CCDS78881.1	1	929	0	3.43	6.3	86.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000069539	Scyl2	ENSMUST00000105294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069539	Scyl2	ENSMUST00000173526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019809	Pex3	ENSMUST00000125207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019809	Pex3	ENSMUST00000105541	ENSMUSP00000101180	TRANSLATION	protein_coding	-	-	1	293	0	7.25	0	0	0	-4,-7	-	-	2.502	MINOR
ENSMUSG00000019809	Pex3	ENSMUST00000019945	ENSMUSP00000019945	TRANSLATION	protein_coding	-	CCDS23702.1	1	372	0	9	8.8	0	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000019809	Pex3	ENSMUST00000170376	ENSMUSP00000128512	TRANSLATION	protein_coding	-	CCDS48503.1	1	359	0	8.25	0.5	0	0	-4,-7	-	-	4.5	MINOR
ENSMUSG00000019809	Pex3	ENSMUST00000105539	ENSMUSP00000101178	TRANSLATION	protein_coding	-	CCDS83681.1	1	306	0	8	0.5	0	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000019809	Pex3	ENSMUST00000145337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019809	Pex3	ENSMUST00000133332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020219	Timm13	ENSMUST00000020440	ENSMUSP00000020440	TRANSLATION	protein_coding	-	CCDS35989.1	1	95	0	1.615	7	94.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020219	Timm13	ENSMUST00000219896	ENSMUSP00000151696	TRANSLATION	protein_coding	-	-	3	80	0	1.115	0	75.4	0	-4,-5	-	-	8.928	MINOR
ENSMUSG00000020219	Timm13	ENSMUST00000218481	ENSMUSP00000151557	TRANSLATION	protein_coding	-	-	3	75	0	0.815	0	50.9	0	-4,-5	-	-	6.264	MINOR
ENSMUSG00000020219	Timm13	ENSMUST00000218149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069456	Rdh16	ENSMUST00000125163	ENSMUSP00000122839	TRANSLATION	nonsense_mediated_decay	-	-	2	47	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000069456	Rdh16	ENSMUST00000155739	ENSMUSP00000115993	TRANSLATION	nonsense_mediated_decay	-	-	1	112	10	0.64	1.2	38	0	1,-3	-	-	-1	MINOR
ENSMUSG00000069456	Rdh16	ENSMUST00000071646	ENSMUSP00000071573	TRANSLATION	protein_coding	-	CCDS24252.1	1	317	27	3.07	1.5	138.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000034958	Atcay	ENSMUST00000133555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034958	Atcay	ENSMUST00000047408	ENSMUSP00000036721	TRANSLATION	protein_coding	-	CCDS24047.1	1	372	0	0	7.5	257.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034958	Atcay	ENSMUST00000146030	ENSMUSP00000118285	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020907	Rcvrn	ENSMUST00000021290	ENSMUSP00000021290	TRANSLATION	protein_coding	-	CCDS24859.1	1	202	11	3	8.4	63.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000017132	Cyth1	ENSMUST00000017276	ENSMUSP00000017276	TRANSLATION	protein_coding	-	CCDS48997.1	1	397	12	9	12.1	333.3	0	-4,-5	-	-	21.664	ALTERNATIVE:1
ENSMUSG00000017132	Cyth1	ENSMUST00000106302	ENSMUSP00000101909	TRANSLATION	protein_coding	-	CCDS48995.1	1	400	12	9	13	333.9	0	-4,-5	-	-	22	PRINCIPAL:4
ENSMUSG00000017132	Cyth1	ENSMUST00000100181	ENSMUSP00000097756	TRANSLATION	protein_coding	start	-	1	460	12	8.25	0	331.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017132	Cyth1	ENSMUST00000151165	ENSMUSP00000114792	TRANSLATION	protein_coding	stop	-	2	99	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017132	Cyth1	ENSMUST00000141243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017132	Cyth1	ENSMUST00000131115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017132	Cyth1	ENSMUST00000106305	ENSMUSP00000101912	TRANSLATION	protein_coding	-	CCDS48996.1	1	398	12	9	12.1	333.9	0	-4,-5	-	-	21.7	ALTERNATIVE:1
ENSMUSG00000020810	Cygb	ENSMUST00000021166	ENSMUSP00000021166	TRANSLATION	protein_coding	-	CCDS25673.1	1	190	17	3.33	7.6	86.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020918	Kat2a	ENSMUST00000126299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020918	Kat2a	ENSMUST00000006973	ENSMUSP00000006973	TRANSLATION	protein_coding	-	CCDS25432.1	1	829	24	6.9	0.5	504.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020918	Kat2a	ENSMUST00000153526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020918	Kat2a	ENSMUST00000103118	ENSMUSP00000099407	TRANSLATION	protein_coding	-	CCDS25433.1	1	830	24	6.9	0.5	504.1	0	-4,-7	-	-	18	PRINCIPAL:4
ENSMUSG00000018654	Ikzf1	ENSMUST00000076700	ENSMUSP00000075992	TRANSLATION	protein_coding	-	CCDS24436.1	1	515	22	3.75	7.5	66.1	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000018654	Ikzf1	ENSMUST00000018798	ENSMUSP00000018798	TRANSLATION	protein_coding	-	CCDS24437.1	1	428	18	2.95	6.3	66.1	0	-4,-5	-	-	16.179	MINOR
ENSMUSG00000018654	Ikzf1	ENSMUST00000048122	ENSMUSP00000046974	TRANSLATION	protein_coding	-	-	1	198	12	2.95	0	66.1	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000018654	Ikzf1	ENSMUST00000065433	ENSMUSP00000067372	TRANSLATION	protein_coding	-	-	5	535	22	3.75	5.3	66.1	0	-4,-5	-	-	19.986	ALTERNATIVE:1
ENSMUSG00000018654	Ikzf1	ENSMUST00000141436	ENSMUSP00000117958	TRANSLATION	protein_coding	stop	-	5	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018654	Ikzf1	ENSMUST00000126058	ENSMUSP00000119960	TRANSLATION	protein_coding	stop	-	3	79	3	1.35	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059278	Naa38	ENSMUST00000082283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059278	Naa38	ENSMUST00000142126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059278	Naa38	ENSMUST00000124932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059278	Naa38	ENSMUST00000144531	ENSMUSP00000123155	TRANSLATION	protein_coding	-	CCDS24893.1	1	125	0	1.28	7.5	49.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000046490	Rnf222	ENSMUST00000065213	ENSMUSP00000067364	TRANSLATION	protein_coding	-	CCDS24871.1	1	211	8	0	3.9	39.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000044847	Lsm11	ENSMUST00000129820	ENSMUSP00000117531	TRANSLATION	protein_coding	-	CCDS36131.1	1	361	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000044847	Lsm11	ENSMUST00000062458	ENSMUSP00000057343	TRANSLATION	nonsense_mediated_decay	-	-	1	361	0	0	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044950	Pwwp2a	ENSMUST00000094294	ENSMUSP00000091852	TRANSLATION	protein_coding	-	CCDS48773.1	5	533	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044950	Pwwp2a	ENSMUST00000109280	ENSMUSP00000104903	TRANSLATION	protein_coding	-	-	2	455	0	0.8	0	43.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000044950	Pwwp2a	ENSMUST00000130467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044950	Pwwp2a	ENSMUST00000129229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044950	Pwwp2a	ENSMUST00000148461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044950	Pwwp2a	ENSMUST00000061070	ENSMUSP00000054154	TRANSLATION	protein_coding	-	CCDS48774.1	1	730	0	0.8	0.5	43.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000019173	Rab5c	ENSMUST00000155500	ENSMUSP00000117656	TRANSLATION	protein_coding	stop	-	3	34	5	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019173	Rab5c	ENSMUST00000019317	ENSMUSP00000019317	TRANSLATION	protein_coding	-	CCDS79048.1	1	234	22	5.6	0.5	190.8	0	-4,-7	-	-	16.362	MINOR
ENSMUSG00000019173	Rab5c	ENSMUST00000155843	ENSMUSP00000123581	TRANSLATION	protein_coding	stop	-	3	83	15	2.5	0	83.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019173	Rab5c	ENSMUST00000107364	ENSMUSP00000102987	TRANSLATION	protein_coding	-	CCDS36333.1	1	216	22	5.85	17	209.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000017291	Taok1	ENSMUST00000017435	ENSMUSP00000017435	TRANSLATION	protein_coding	-	CCDS36235.1	1	1001	23	9	15	218.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017291	Taok1	ENSMUST00000058496	ENSMUSP00000055470	TRANSLATION	protein_coding	-	CCDS36235.1	1	1001	23	9	15	218.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059397	Olfr54	ENSMUST00000217480	ENSMUSP00000150809	TRANSLATION	protein_coding	-	CCDS24647.1	5	313	0	0.36	2.7	192.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059397	Olfr54	ENSMUST00000215409	ENSMUSP00000148863	TRANSLATION	protein_coding	-	CCDS24647.1	5	313	0	0.36	2.7	192.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059397	Olfr54	ENSMUST00000072152	ENSMUSP00000072016	TRANSLATION	protein_coding	-	CCDS24647.1	-	313	0	0.36	2.7	192.6	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051378	Kif18b	ENSMUST00000021311	ENSMUSP00000021311	TRANSLATION	protein_coding	-	CCDS25508.1	1	834	11	6.27	0.5	371.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000051378	Kif18b	ENSMUST00000132502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020900	Myh10	ENSMUST00000141558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020900	Myh10	ENSMUST00000155765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020900	Myh10	ENSMUST00000102611	ENSMUSP00000099671	TRANSLATION	protein_coding	-	CCDS24869.1	1	1976	14	34.23	8.3	2797.4	0	-4,-5	-	-	20.154	PRINCIPAL:2
ENSMUSG00000020900	Myh10	ENSMUST00000139059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020900	Myh10	ENSMUST00000018887	ENSMUSP00000018887	TRANSLATION	protein_coding	-	-	5	2007	14	34.653	8.3	2790.7	0	-4,-5	-	-	20.598	ALTERNATIVE:1
ENSMUSG00000020900	Myh10	ENSMUST00000124006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020900	Myh10	ENSMUST00000108673	ENSMUSP00000104313	TRANSLATION	protein_coding	-	-	1	231	11	3.528	0	252.2	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000020900	Myh10	ENSMUST00000145408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020900	Myh10	ENSMUST00000092984	ENSMUSP00000090661	TRANSLATION	protein_coding	-	-	1	2013	14	34.23	0	2797.4	0	-4,-7	-	-	17.154	MINOR
ENSMUSG00000020900	Myh10	ENSMUST00000143032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040963	Asgr2	ENSMUST00000102572	ENSMUSP00000099632	TRANSLATION	protein_coding	-	CCDS24934.1	1	301	14	3.73	1.5	284.7	1	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000040963	Asgr2	ENSMUST00000179757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040963	Asgr2	ENSMUST00000124721	ENSMUSP00000121189	TRANSLATION	protein_coding	stop	-	5	226	3	1.98	0	216.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000040963	Asgr2	ENSMUST00000143772	ENSMUSP00000136505	TRANSLATION	protein_coding	stop	-	5	192	14	3.73	0	169.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020745	Pafah1b1	ENSMUST00000126341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020745	Pafah1b1	ENSMUST00000156794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020745	Pafah1b1	ENSMUST00000102520	ENSMUSP00000099578	TRANSLATION	protein_coding	-	CCDS25035.1	1	410	0	9.58	21.5	250.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020745	Pafah1b1	ENSMUST00000021091	ENSMUSP00000021091	TRANSLATION	protein_coding	-	CCDS25035.1	1	410	0	9.58	21.5	250.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020745	Pafah1b1	ENSMUST00000155493	ENSMUSP00000118231	TRANSLATION	protein_coding	stop	-	2	97	0	2.83	0	36.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000152990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025142	Aspscr1	ENSMUST00000103016	ENSMUSP00000099305	TRANSLATION	protein_coding	-	CCDS25752.1	5	473	0	7.16	1.5	24.2	0	-4,-6	-	-	2.172	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000168097	ENSMUSP00000130303	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000106159	ENSMUSP00000101765	TRANSLATION	protein_coding	-	CCDS25752.1	5	473	0	7.16	1.5	24.2	0	-4,-6	-	-	2.172	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000153346	ENSMUSP00000120669	TRANSLATION	protein_coding	stop	-	3	67	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000168714	ENSMUSP00000129462	TRANSLATION	protein_coding	stop	-	5	107	0	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000151531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025142	Aspscr1	ENSMUST00000149389	ENSMUSP00000122216	TRANSLATION	protein_coding	stop	-	3	225	0	1.75	0	60.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000168947	ENSMUSP00000125851	TRANSLATION	nonsense_mediated_decay	start	-	3	25	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000106160	ENSMUSP00000101766	TRANSLATION	protein_coding	-	CCDS49008.1	1	452	0	6.41	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000169964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025142	Aspscr1	ENSMUST00000167678	ENSMUSP00000128940	TRANSLATION	protein_coding	start	-	5	178	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000151160	ENSMUSP00000116447	TRANSLATION	protein_coding	stop	-	3	220	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000131727	ENSMUSP00000117654	TRANSLATION	protein_coding	stop	-	3	177	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000127269	ENSMUSP00000123650	TRANSLATION	protein_coding	stop	-	3	25	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000026135	ENSMUSP00000026135	TRANSLATION	protein_coding	-	CCDS25751.1	1	550	0	9.41	0.5	113	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025142	Aspscr1	ENSMUST00000135346	ENSMUSP00000120072	TRANSLATION	protein_coding	stop	-	2	178	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000172392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025142	Aspscr1	ENSMUST00000143844	ENSMUSP00000129320	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000168510	ENSMUSP00000125931	TRANSLATION	protein_coding	start/stop	-	5	136	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000166838	ENSMUSP00000127202	TRANSLATION	nonsense_mediated_decay	start	-	5	183	0	2.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000129644	ENSMUSP00000117353	TRANSLATION	protein_coding	stop	-	5	22	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025142	Aspscr1	ENSMUST00000171700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025142	Aspscr1	ENSMUST00000106158	ENSMUSP00000101764	TRANSLATION	protein_coding	-	CCDS49008.1	5	452	0	6.41	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020493	Prr11	ENSMUST00000051395	ENSMUSP00000060803	TRANSLATION	protein_coding	-	CCDS25208.1	1	368	0	0	2.7	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000046719	Nxph3	ENSMUST00000058866	ENSMUSP00000058254	TRANSLATION	protein_coding	-	CCDS25278.1	1	252	0	0	7.5	323.5	0	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020743	Mif4gd	ENSMUST00000021087	ENSMUSP00000021087	TRANSLATION	protein_coding	-	CCDS25643.1	1	222	0	5.75	13.3	48.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020743	Mif4gd	ENSMUST00000106506	ENSMUSP00000102115	TRANSLATION	protein_coding	-	CCDS56818.1	3	203	0	5.25	1.5	28.8	0	-4,-5	-	-	8.726	MINOR
ENSMUSG00000020743	Mif4gd	ENSMUST00000106507	ENSMUSP00000102116	TRANSLATION	protein_coding	-	CCDS25643.1	1	222	0	5.75	13.3	48.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020743	Mif4gd	ENSMUST00000146244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020743	Mif4gd	ENSMUST00000148574	ENSMUSP00000119643	TRANSLATION	protein_coding	stop	-	3	162	0	4.25	0	25.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020743	Mif4gd	ENSMUST00000142637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020743	Mif4gd	ENSMUST00000139556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020743	Mif4gd	ENSMUST00000137304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020743	Mif4gd	ENSMUST00000127132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020743	Mif4gd	ENSMUST00000124407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020537	Drg2	ENSMUST00000147745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020537	Drg2	ENSMUST00000138713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020537	Drg2	ENSMUST00000018568	ENSMUSP00000018568	TRANSLATION	protein_coding	-	CCDS24791.1	1	364	18	10.05	20.3	311.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020537	Drg2	ENSMUST00000136484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020537	Drg2	ENSMUST00000155731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017221	Psmd3	ENSMUST00000152102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017221	Psmd3	ENSMUST00000123676	ENSMUSP00000116968	TRANSLATION	protein_coding	start/stop	-	5	222	0	4.285	0	33.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017221	Psmd3	ENSMUST00000149489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017221	Psmd3	ENSMUST00000142790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017221	Psmd3	ENSMUST00000017365	ENSMUSP00000017365	TRANSLATION	protein_coding	-	CCDS25359.1	1	530	0	11.63	7.5	183.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059474	Mbtd1	ENSMUST00000140880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000155518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000107853	ENSMUSP00000103485	TRANSLATION	protein_coding	-	CCDS48883.1	3	631	4	10.25	8.1	298.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000059474	Mbtd1	ENSMUST00000127539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000145354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000107850	ENSMUSP00000103482	TRANSLATION	protein_coding	stop	-	5	201	4	2.95	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059474	Mbtd1	ENSMUST00000107854	ENSMUSP00000103486	TRANSLATION	protein_coding	-	CCDS48883.1	1	631	4	10.25	8.1	298.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000059474	Mbtd1	ENSMUST00000063645	ENSMUSP00000070248	TRANSLATION	protein_coding	-	-	1	504	4	8.34	0	198.3	0	-4,-5	-	-	6.19	MINOR
ENSMUSG00000059474	Mbtd1	ENSMUST00000132739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000107852	ENSMUSP00000103484	TRANSLATION	protein_coding	-	-	5	433	4	7.56	1.2	142.3	0	-4,-5	-	-	4.702	MINOR
ENSMUSG00000059474	Mbtd1	ENSMUST00000138281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000150237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059474	Mbtd1	ENSMUST00000063718	ENSMUSP00000065442	TRANSLATION	protein_coding	-	CCDS83868.1	1	622	4	10.25	0.5	298.1	0	-4,-5	-	-	16	MINOR
ENSMUSG00000059474	Mbtd1	ENSMUST00000155841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020821	Kif1c	ENSMUST00000137119	ENSMUSP00000123242	TRANSLATION	protein_coding	-	CCDS24965.1	5	1100	11	14.1	1.5	628.7	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000020821	Kif1c	ENSMUST00000072187	ENSMUSP00000072048	TRANSLATION	protein_coding	-	-	1	1112	11	14.1	0	628.7	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000020821	Kif1c	ENSMUST00000094499	ENSMUSP00000092075	TRANSLATION	protein_coding	-	CCDS24965.1	1	1100	11	14.1	1.5	628.7	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000020821	Kif1c	ENSMUST00000152618	ENSMUSP00000136258	TRANSLATION	protein_coding	-	-	1	425	11	9.1	0	423.9	0	-4,-1	-	-	6	MINOR
ENSMUSG00000020821	Kif1c	ENSMUST00000102554	ENSMUSP00000099614	TRANSLATION	protein_coding	-	CCDS24965.1	5	1100	11	14.1	1.5	628.7	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000107645	Olfr1380	ENSMUST00000215360	ENSMUSP00000151039	TRANSLATION	protein_coding	-	CCDS24617.1	5	311	0	0.3	5.1	159	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000107645	Olfr1380	ENSMUST00000204300	ENSMUSP00000145428	TRANSLATION	protein_coding	-	CCDS24617.1	-	311	0	0.3	5.1	159	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025577	Cbx2	ENSMUST00000139746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025577	Cbx2	ENSMUST00000026662	ENSMUSP00000026662	TRANSLATION	protein_coding	-	CCDS25708.1	1	519	0	2.6	0.5	102.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025158	Rfng	ENSMUST00000123273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025158	Rfng	ENSMUST00000026156	ENSMUSP00000026156	TRANSLATION	protein_coding	-	CCDS25757.1	1	332	9	6.6	1.5	377.5	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000057113	Npm1	ENSMUST00000146759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057113	Npm1	ENSMUST00000093201	ENSMUSP00000090891	TRANSLATION	protein_coding	-	-	5	264	0	6.55	1.2	275.9	0	-4,-5	-	-	12.078	MINOR
ENSMUSG00000057113	Npm1	ENSMUST00000075641	ENSMUSP00000075067	TRANSLATION	protein_coding	-	CCDS24532.1	1	292	0	6.55	8.8	275.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057113	Npm1	ENSMUST00000141881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057113	Npm1	ENSMUST00000109354	ENSMUSP00000104978	TRANSLATION	protein_coding	-	CCDS56765.1	1	257	0	5.3	4.1	159.4	0	-4,-5	-	-	4.689	MINOR
ENSMUSG00000057113	Npm1	ENSMUST00000101375	ENSMUSP00000098926	TRANSLATION	protein_coding	-	-	1	285	0	5.3	0	159.4	0	-4,-5	-	-	3.498	MINOR
ENSMUSG00000034187	Nsf	ENSMUST00000140394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000103075	ENSMUSP00000099364	TRANSLATION	protein_coding	-	CCDS25524.1	1	744	39	17.08	9.2	281.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000034187	Nsf	ENSMUST00000040443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000150516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000133774	ENSMUSP00000133591	TRANSLATION	protein_coding	stop	-	5	210	4	5.25	0	70.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034187	Nsf	ENSMUST00000146036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000145126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000107009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000127813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034187	Nsf	ENSMUST00000149642	ENSMUSP00000133603	TRANSLATION	protein_coding	stop	-	5	76	0	2.25	0	48.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044807	Zfp354c	ENSMUST00000109135	ENSMUSP00000104763	TRANSLATION	protein_coding	-	CCDS24637.1	1	560	44	1.6	0.5	299.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044807	Zfp354c	ENSMUST00000139465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044807	Zfp354c	ENSMUST00000000632	ENSMUSP00000000632	TRANSLATION	protein_coding	-	CCDS24637.1	1	560	44	1.6	0.5	299.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044807	Zfp354c	ENSMUST00000136333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025375	Aatk	ENSMUST00000150730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025375	Aatk	ENSMUST00000103019	ENSMUSP00000099308	TRANSLATION	protein_coding	-	CCDS25725.1	1	1317	19	4.8	0.5	208.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000025375	Aatk	ENSMUST00000128836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025375	Aatk	ENSMUST00000136386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025375	Aatk	ENSMUST00000103020	ENSMUSP00000099309	TRANSLATION	protein_coding	-	CCDS25725.1	1	1317	19	4.8	0.5	208.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000025375	Aatk	ENSMUST00000064307	ENSMUSP00000067181	TRANSLATION	protein_coding	-	CCDS56826.1	1	1374	19	4.8	0.5	208.8	0	-2,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025375	Aatk	ENSMUST00000142959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025375	Aatk	ENSMUST00000132575	ENSMUSP00000159258	TRANSLATION	protein_coding	stop	-	3	99	9	2.23	0	75.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025375	Aatk	ENSMUST00000134319	ENSMUSP00000159266	TRANSLATION	protein_coding	stop	-	3	95	1	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018537	Pcgf2	ENSMUST00000169807	ENSMUSP00000126967	TRANSLATION	protein_coding	-	CCDS25327.1	1	342	8	5.664	7.5	118.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000018537	Pcgf2	ENSMUST00000126185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018537	Pcgf2	ENSMUST00000018681	ENSMUSP00000018681	TRANSLATION	protein_coding	-	CCDS25327.1	1	342	8	5.664	7.5	118.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000018537	Pcgf2	ENSMUST00000103149	ENSMUSP00000099438	TRANSLATION	protein_coding	-	-	5	158	0	1.214	0	38	0	-4,-5	-	-	1.188	MINOR
ENSMUSG00000018537	Pcgf2	ENSMUST00000134003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018537	Pcgf2	ENSMUST00000179765	ENSMUSP00000137517	TRANSLATION	protein_coding	-	CCDS25327.1	1	342	8	5.664	7.5	118.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000018537	Pcgf2	ENSMUST00000103148	ENSMUSP00000099437	TRANSLATION	protein_coding	-	CCDS25327.1	5	342	8	5.664	7.5	118.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000002741	Ykt6	ENSMUST00000002818	ENSMUSP00000002818	TRANSLATION	protein_coding	-	CCDS24410.1	1	198	0	5.83	16.3	100.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002741	Ykt6	ENSMUST00000143834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020431	Adcy1	ENSMUST00000135398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020431	Adcy1	ENSMUST00000020706	ENSMUSP00000020706	TRANSLATION	protein_coding	-	CCDS24426.1	2	1118	7	9.58	0.5	525.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000009079	Ewsr1	ENSMUST00000144238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000063232	ENSMUSP00000066827	TRANSLATION	protein_coding	-	-	1	113	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000009079	Ewsr1	ENSMUST00000130118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000141002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000073308	ENSMUSP00000073034	TRANSLATION	protein_coding	-	CCDS70131.1	1	618	4	4	0.5	86	0	-4,-5	-	-	16	MINOR
ENSMUSG00000009079	Ewsr1	ENSMUST00000079949	ENSMUSP00000078867	TRANSLATION	protein_coding	-	CCDS24396.1	1	655	4	4	5.1	86	0	-4,-5	-	-	17.864	PRINCIPAL:2
ENSMUSG00000009079	Ewsr1	ENSMUST00000102930	ENSMUSP00000099994	TRANSLATION	protein_coding	-	-	5	661	4	4	5.1	86	0	-4,-5	-	-	17.864	ALTERNATIVE:1
ENSMUSG00000009079	Ewsr1	ENSMUST00000139886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000151497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000151847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000130060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000150168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009079	Ewsr1	ENSMUST00000093365	ENSMUSP00000091057	TRANSLATION	protein_coding	-	-	5	354	0	0	5.4	0	0	-4,-5	-	-	2	MINOR
ENSMUSG00000019122	Ccl9	ENSMUST00000136131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019122	Ccl9	ENSMUST00000019266	ENSMUSP00000019266	TRANSLATION	protein_coding	-	CCDS25170.1	1	122	0	2	0.5	61	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020346	Mgat1	ENSMUST00000135314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000156607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000135489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000081794	ENSMUSP00000080484	TRANSLATION	protein_coding	-	CCDS24602.1	1	447	10	2	7.5	676.4	1	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020346	Mgat1	ENSMUST00000109194	ENSMUSP00000104817	TRANSLATION	protein_coding	-	CCDS24602.1	1	447	10	2	7.5	676.4	1	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020346	Mgat1	ENSMUST00000148962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000129588	ENSMUSP00000114965	TRANSLATION	protein_coding	stop	-	3	200	6	1	0	206.1	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000020346	Mgat1	ENSMUST00000152451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000101293	ENSMUSP00000098851	TRANSLATION	protein_coding	-	CCDS24602.1	1	447	10	2	7.5	676.4	1	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020346	Mgat1	ENSMUST00000149406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000129541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000155806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020346	Mgat1	ENSMUST00000167400	ENSMUSP00000126303	TRANSLATION	protein_coding	-	CCDS24602.1	5	447	10	2	7.5	676.4	1	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020801	Med31	ENSMUST00000021157	ENSMUSP00000021157	TRANSLATION	protein_coding	-	CCDS24981.1	1	131	0	2.548	7.3	136.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020801	Med31	ENSMUST00000129264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059796	Eif4a1	ENSMUST00000127677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000123995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059796	Eif4a1	ENSMUST00000129295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059796	Eif4a1	ENSMUST00000163666	ENSMUSP00000127034	TRANSLATION	protein_coding	-	CCDS24904.1	1	406	13	9.58	15.5	256.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000059796	Eif4a1	ENSMUST00000102589	ENSMUSP00000099649	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000059796	Eif4a1	ENSMUST00000133067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000140310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000142348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000128519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059796	Eif4a1	ENSMUST00000140186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000145289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059796	Eif4a1	ENSMUST00000142214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059796	Eif4a1	ENSMUST00000139299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038208	Pgap3	ENSMUST00000128058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038208	Pgap3	ENSMUST00000041218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038208	Pgap3	ENSMUST00000090827	ENSMUSP00000088337	TRANSLATION	protein_coding	-	CCDS25348.1	1	320	0	0	6.3	312.8	7	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000038208	Pgap3	ENSMUST00000125348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038208	Pgap3	ENSMUST00000128897	ENSMUSP00000119668	TRANSLATION	protein_coding	-	-	5	269	0	0	3.9	232.2	5	4,-1	-	-	2.258	MINOR
ENSMUSG00000052373	Mpp3	ENSMUST00000141403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052373	Mpp3	ENSMUST00000107167	ENSMUSP00000102785	TRANSLATION	protein_coding	-	-	1	231	0	4.798	0	128.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052373	Mpp3	ENSMUST00000062801	ENSMUSP00000055469	TRANSLATION	protein_coding	-	CCDS36338.1	1	585	14	10.368	6.3	302.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000052373	Mpp3	ENSMUST00000155751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052373	Mpp3	ENSMUST00000100400	ENSMUSP00000097969	TRANSLATION	protein_coding	-	CCDS36338.1	1	585	14	10.368	6.3	302.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000052373	Mpp3	ENSMUST00000127053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052373	Mpp3	ENSMUST00000132094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052373	Mpp3	ENSMUST00000147838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052373	Mpp3	ENSMUST00000107168	ENSMUSP00000102786	TRANSLATION	protein_coding	-	CCDS36338.1	5	585	14	10.368	6.3	302.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000059169	Krt40	ENSMUST00000074253	ENSMUSP00000073869	TRANSLATION	protein_coding	-	CCDS36307.1	1	439	2	3.36	0.5	327.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059169	Krt40	ENSMUST00000107443	ENSMUSP00000103067	TRANSLATION	protein_coding	-	CCDS83897.1	1	359	2	2.2	0.5	162.6	0	-4,-5	-	-	5.678	MINOR
ENSMUSG00000032782	Cntrob	ENSMUST00000156175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032782	Cntrob	ENSMUST00000130780	ENSMUSP00000134842	TRANSLATION	protein_coding	start	-	3	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032782	Cntrob	ENSMUST00000176938	ENSMUSP00000135258	TRANSLATION	protein_coding	start	-	2	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032782	Cntrob	ENSMUST00000123176	ENSMUSP00000122205	TRANSLATION	nonsense_mediated_decay	-	-	1	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032782	Cntrob	ENSMUST00000148490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032782	Cntrob	ENSMUST00000156671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032782	Cntrob	ENSMUST00000125777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032782	Cntrob	ENSMUST00000135979	ENSMUSP00000115422	TRANSLATION	protein_coding	start	-	3	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032782	Cntrob	ENSMUST00000092973	ENSMUSP00000090651	TRANSLATION	protein_coding	-	CCDS24888.2	1	887	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000032782	Cntrob	ENSMUST00000176111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051062	Fbll1	ENSMUST00000160726	ENSMUSP00000128889	TRANSLATION	protein_coding	-	CCDS36128.1	-	314	14	1	0.5	354.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020388	Pdlim4	ENSMUST00000018755	ENSMUSP00000018755	TRANSLATION	protein_coding	-	CCDS24690.1	1	330	8	4.8	7.5	160.4	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000020388	Pdlim4	ENSMUST00000127271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020388	Pdlim4	ENSMUST00000144477	ENSMUSP00000121248	TRANSLATION	protein_coding	stop	-	5	121	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020388	Pdlim4	ENSMUST00000093109	ENSMUSP00000090797	TRANSLATION	protein_coding	-	-	5	246	0	2.65	6.5	106.3	0	-4,-1	-	-	6.99	MINOR
ENSMUSG00000020388	Pdlim4	ENSMUST00000151948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000156304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000129869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000144942	ENSMUSP00000120777	TRANSLATION	protein_coding	stop	-	5	1022	0	2	0	60.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000020538	Srebf1	ENSMUST00000154925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000136426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000141161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000147967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000134660	ENSMUSP00000122934	TRANSLATION	protein_coding	start	-	1	1076	0	2	0	60.1	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000020538	Srebf1	ENSMUST00000136215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000020846	ENSMUSP00000020846	TRANSLATION	protein_coding	-	CCDS24785.1	1	1134	0	2	1.5	60.1	3	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020538	Srebf1	ENSMUST00000149238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020538	Srebf1	ENSMUST00000154620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018401	Mtmr4	ENSMUST00000103179	ENSMUSP00000099468	TRANSLATION	protein_coding	-	CCDS25214.1	1	1190	7	9.71	1.5	509.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018401	Mtmr4	ENSMUST00000092802	ENSMUSP00000090478	TRANSLATION	protein_coding	-	-	1	1133	7	8.71	0	470	0	-4,-5	-	-	13.65	MINOR
ENSMUSG00000018401	Mtmr4	ENSMUST00000123105	ENSMUSP00000119489	TRANSLATION	protein_coding	stop	-	5	70	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018401	Mtmr4	ENSMUST00000134216	ENSMUSP00000119660	TRANSLATION	protein_coding	stop	-	2	204	0	1.95	0	26.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018401	Mtmr4	ENSMUST00000146871	ENSMUSP00000119446	TRANSLATION	protein_coding	stop	-	3	97	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018401	Mtmr4	ENSMUST00000119628	ENSMUSP00000112902	TRANSLATION	protein_coding	-	CCDS25214.1	1	1190	7	9.71	1.5	509.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000070407	Hs3st3b1	ENSMUST00000094103	ENSMUSP00000091647	TRANSLATION	protein_coding	-	CCDS24838.1	1	390	21	1.6	3.9	154.7	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000025386	Pde6g	ENSMUST00000026452	ENSMUSP00000026452	TRANSLATION	protein_coding	-	CCDS36389.1	1	87	0	2.25	21.5	159.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025386	Pde6g	ENSMUST00000141795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025386	Pde6g	ENSMUST00000155421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056959	Olfr315	ENSMUST00000203256	ENSMUSP00000144944	TRANSLATION	protein_coding	-	CCDS24744.1	3	309	0	0.42	1.5	172.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056959	Olfr315	ENSMUST00000081533	ENSMUSP00000080248	TRANSLATION	protein_coding	-	CCDS24744.1	-	309	0	0.42	1.5	172.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020387	Jade2	ENSMUST00000109090	ENSMUSP00000104718	TRANSLATION	protein_coding	-	-	1	576	12	2.4	0	182.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020387	Jade2	ENSMUST00000151277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020387	Jade2	ENSMUST00000020655	ENSMUSP00000020655	TRANSLATION	protein_coding	-	CCDS24662.1	1	829	12	2.4	1.5	181.6	0	-4,-5	-	-	17.946	PRINCIPAL:2
ENSMUSG00000020387	Jade2	ENSMUST00000109091	ENSMUSP00000104719	TRANSLATION	protein_coding	-	CCDS24662.1	1	829	12	2.4	1.5	181.6	0	-4,-5	-	-	17.946	PRINCIPAL:2
ENSMUSG00000039963	Ccdc40	ENSMUST00000155683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039963	Ccdc40	ENSMUST00000236813	ENSMUSP00000158069	TRANSLATION	protein_coding	-	-	-	1262	0	0	0.5	75.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000039963	Ccdc40	ENSMUST00000125724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039963	Ccdc40	ENSMUST00000143066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039963	Ccdc40	ENSMUST00000235971	ENSMUSP00000158198	TRANSLATION	nonsense_mediated_decay	-	-	-	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039963	Ccdc40	ENSMUST00000126652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039963	Ccdc40	ENSMUST00000053440	ENSMUSP00000062198	TRANSLATION	protein_coding	-	-	1	1137	0	0	0	75.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000039963	Ccdc40	ENSMUST00000133788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001313	Rnd2	ENSMUST00000134980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001313	Rnd2	ENSMUST00000001347	ENSMUSP00000001347	TRANSLATION	protein_coding	-	CCDS25473.1	1	227	21	4.6	9.6	132.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001313	Rnd2	ENSMUST00000153185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020857	Nme2	ENSMUST00000072566	ENSMUSP00000103476	TRANSLATION	protein_coding	-	CCDS25246.1	1	152	12	4	19.5	190.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020857	Nme2	ENSMUST00000021217	ENSMUSP00000021217	TRANSLATION	protein_coding	-	CCDS25246.1	1	152	12	4	19.5	190.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000078260	Gm11569	ENSMUST00000105057	ENSMUSP00000100678	TRANSLATION	protein_coding	-	CCDS48919.1	-	180	0	0	0.5	116.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018340	Anxa6	ENSMUST00000148298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018340	Anxa6	ENSMUST00000108883	ENSMUSP00000104511	TRANSLATION	protein_coding	-	CCDS24705.1	1	673	14	19.91	7.5	655.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018340	Anxa6	ENSMUST00000102727	ENSMUSP00000099788	TRANSLATION	protein_coding	-	CCDS48799.1	1	667	14	19.58	5.1	650.8	0	-4,-5	-	-	18.969	MINOR
ENSMUSG00000017499	Cdc6	ENSMUST00000133779	ENSMUSP00000118421	TRANSLATION	nonsense_mediated_decay	-	-	1	417	17	5.05	0.5	47.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017499	Cdc6	ENSMUST00000092706	ENSMUSP00000090382	TRANSLATION	protein_coding	-	CCDS25368.1	1	562	17	6.68	1.5	110.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000017499	Cdc6	ENSMUST00000135862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017499	Cdc6	ENSMUST00000093937	ENSMUSP00000091469	TRANSLATION	protein_coding	-	CCDS25367.1	1	589	17	6.68	0.5	110.5	0	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000041046	Ramp3	ENSMUST00000139540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041046	Ramp3	ENSMUST00000045374	ENSMUSP00000047518	TRANSLATION	protein_coding	-	CCDS24425.1	1	147	0	0.88	1.5	143.8	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020780	Srp68	ENSMUST00000127205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020780	Srp68	ENSMUST00000021133	ENSMUSP00000021133	TRANSLATION	protein_coding	-	CCDS25662.1	1	625	0	6.5	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000020780	Srp68	ENSMUST00000128808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020780	Srp68	ENSMUST00000106425	ENSMUSP00000102033	TRANSLATION	protein_coding	-	-	5	587	0	5.5	1.2	0	0	-4,-5	-	-	4.071	MINOR
ENSMUSG00000020744	Slc25a19	ENSMUST00000150898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020744	Slc25a19	ENSMUST00000106503	ENSMUSP00000102112	TRANSLATION	protein_coding	-	CCDS56819.1	1	227	0	2.23	0.5	95.5	0	-4,-6	-	-	2.466	MINOR
ENSMUSG00000020744	Slc25a19	ENSMUST00000021089	ENSMUSP00000021089	TRANSLATION	protein_coding	-	CCDS25644.1	1	318	0	3.996	1.5	219	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020744	Slc25a19	ENSMUST00000140539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020744	Slc25a19	ENSMUST00000135552	ENSMUSP00000114566	TRANSLATION	protein_coding	stop	-	3	225	0	2.4	0	151.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020744	Slc25a19	ENSMUST00000144083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020744	Slc25a19	ENSMUST00000155709	ENSMUSP00000115742	TRANSLATION	protein_coding	stop	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020744	Slc25a19	ENSMUST00000178003	ENSMUSP00000137534	TRANSLATION	protein_coding	-	CCDS25644.1	5	318	0	3.996	1.5	219	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020744	Slc25a19	ENSMUST00000154623	ENSMUSP00000116005	TRANSLATION	protein_coding	stop	-	2	37	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020744	Slc25a19	ENSMUST00000134171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020744	Slc25a19	ENSMUST00000129194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020744	Slc25a19	ENSMUST00000141614	ENSMUSP00000120390	TRANSLATION	protein_coding	stop	-	3	44	0	0.83	0	23.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034247	Plekhm1	ENSMUST00000184350	ENSMUSP00000138878	TRANSLATION	nonsense_mediated_decay	start	-	5	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034247	Plekhm1	ENSMUST00000041272	ENSMUSP00000047327	TRANSLATION	protein_coding	-	CCDS25518.1	1	1074	13	0.64	0.5	312.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040447	Spns2	ENSMUST00000144940	ENSMUSP00000120722	TRANSLATION	protein_coding	start	-	3	131	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000040447	Spns2	ENSMUST00000150491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040447	Spns2	ENSMUST00000045303	ENSMUSP00000044418	TRANSLATION	protein_coding	-	CCDS48841.1	1	549	0	0	2.7	123.8	12	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040447	Spns2	ENSMUST00000129274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040447	Spns2	ENSMUST00000126452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040447	Spns2	ENSMUST00000147418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041598	Cdc42ep4	ENSMUST00000153453	ENSMUSP00000120316	TRANSLATION	protein_coding	stop	-	2	86	0	0	0	48.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041598	Cdc42ep4	ENSMUST00000131488	ENSMUSP00000114599	TRANSLATION	protein_coding	stop	-	5	193	0	0	0	48.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041598	Cdc42ep4	ENSMUST00000053536	ENSMUSP00000060227	TRANSLATION	protein_coding	-	CCDS25604.1	1	349	0	0	1.5	125.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000041598	Cdc42ep4	ENSMUST00000106616	ENSMUSP00000102227	TRANSLATION	protein_coding	-	CCDS25604.1	1	349	0	0	1.5	125.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000036391	Sec24a	ENSMUST00000109097	ENSMUSP00000104725	TRANSLATION	protein_coding	-	CCDS24660.2	1	1090	4	17.5	1.5	536.8	0	-4,-1	-	-	16	PRINCIPAL:3
ENSMUSG00000036391	Sec24a	ENSMUST00000147255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036391	Sec24a	ENSMUST00000064297	ENSMUSP00000068065	TRANSLATION	protein_coding	-	-	1	592	4	6	0	149.4	0	-4,-1	-	-	4	MINOR
ENSMUSG00000036391	Sec24a	ENSMUST00000038210	ENSMUSP00000044370	TRANSLATION	protein_coding	-	CCDS70181.1	2	1089	4	17.5	1.5	536.8	0	-4,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000036391	Sec24a	ENSMUST00000109092	ENSMUSP00000104720	TRANSLATION	protein_coding	-	-	1	591	4	6	0	149.4	0	-4,-1	-	-	4	MINOR
ENSMUSG00000036391	Sec24a	ENSMUST00000154325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034993	Vat1	ENSMUST00000040430	ENSMUSP00000048350	TRANSLATION	protein_coding	-	CCDS25472.1	1	406	20	4.64	0.5	72	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001508	Sgca	ENSMUST00000100551	ENSMUSP00000098118	TRANSLATION	protein_coding	-	CCDS25266.1	1	387	0	0	5.1	192.1	2	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000001508	Sgca	ENSMUST00000103162	ENSMUSP00000099451	TRANSLATION	protein_coding	-	CCDS25266.1	5	387	0	0	5.1	192.1	2	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000001508	Sgca	ENSMUST00000166320	ENSMUSP00000130617	TRANSLATION	protein_coding	-	CCDS25266.1	1	387	0	0	5.1	192.1	2	1,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000001508	Sgca	ENSMUST00000139855	ENSMUSP00000117637	TRANSLATION	protein_coding	start	-	5	140	0	0	0	48.7	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000001508	Sgca	ENSMUST00000152042	ENSMUSP00000118455	TRANSLATION	protein_coding	stop	-	2	100	0	0	0	50.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000143139	ENSMUSP00000118773	TRANSLATION	protein_coding	stop	-	3	193	11	2.844	0	154.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000125156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025155	Dus1l	ENSMUST00000106133	ENSMUSP00000101739	TRANSLATION	protein_coding	-	-	5	482	19	4.162	0	247.5	0	-4,-2	-	-	17.982	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000167023	ENSMUSP00000132516	TRANSLATION	protein_coding	-	CCDS49012.1	1	475	19	3.962	5.1	247.8	0	-4,-2	-	-	19.598	PRINCIPAL:1
ENSMUSG00000025155	Dus1l	ENSMUST00000142418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025155	Dus1l	ENSMUST00000129955	ENSMUSP00000116619	TRANSLATION	protein_coding	stop	-	3	166	11	2.312	0	132.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000026151	ENSMUSP00000026151	TRANSLATION	protein_coding	-	-	5	482	19	4.162	0	247.5	0	-4,-2	-	-	17.982	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000106135	ENSMUSP00000101741	TRANSLATION	protein_coding	-	-	5	482	19	4.162	0	247.5	0	-4,-2	-	-	17.982	MINOR
ENSMUSG00000025155	Dus1l	ENSMUST00000146008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001105	Ift20	ENSMUST00000050366	ENSMUSP00000051699	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	148	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001105	Ift20	ENSMUST00000137120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001105	Ift20	ENSMUST00000128788	ENSMUSP00000118015	TRANSLATION	protein_coding	-	CCDS25111.1	1	132	0	0	15.5	169.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001105	Ift20	ENSMUST00000108275	ENSMUSP00000103910	TRANSLATION	protein_coding	-	CCDS25111.1	1	132	0	0	15.5	169.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000001105	Ift20	ENSMUST00000152016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049154	Fam183b	ENSMUST00000239007	ENSMUSP00000159142	TRANSLATION	protein_coding	-	CCDS48808.1	-	137	0	0	1.5	109	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000049154	Fam183b	ENSMUST00000094156	ENSMUSP00000091708	TRANSLATION	protein_coding	-	-	1	135	0	0	1.5	109	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000049154	Fam183b	ENSMUST00000238886	ENSMUSP00000159184	TRANSLATION	protein_coding	-	CCDS48807.1	-	117	0	0	0.5	51.2	0	-4,-6	-	-	2.532	MINOR
ENSMUSG00000049154	Fam183b	ENSMUST00000060581	ENSMUSP00000051960	TRANSLATION	protein_coding	-	-	1	115	0	0	0.5	51.2	0	-4,-6	-	-	2.532	MINOR
ENSMUSG00000081906	Rpl9-ps1	ENSMUST00000117199	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000081906	Rpl9-ps1	ENSMUST00000182502	ENSMUSP00000138342	TRANSLATION	protein_coding	-	-	-	191	0	1	0	73.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018733	Pex12	ENSMUST00000108146	ENSMUSP00000103781	TRANSLATION	protein_coding	-	CCDS25160.1	1	359	4	0	1.5	161.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000018733	Pex12	ENSMUST00000176518	ENSMUSP00000135632	TRANSLATION	protein_coding	-	CCDS25160.1	1	359	4	0	1.5	161.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000018733	Pex12	ENSMUST00000153487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018733	Pex12	ENSMUST00000175741	ENSMUSP00000135145	TRANSLATION	protein_coding	-	CCDS25160.1	1	359	4	0	1.5	161.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000018733	Pex12	ENSMUST00000136369	ENSMUSP00000118829	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018733	Pex12	ENSMUST00000176374	ENSMUSP00000134965	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018733	Pex12	ENSMUST00000018877	ENSMUSP00000018877	TRANSLATION	protein_coding	-	CCDS25160.1	1	359	4	0	1.5	161.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000018363	Smurf2	ENSMUST00000103067	ENSMUSP00000099356	TRANSLATION	protein_coding	-	-	5	735	6	15.15	2.9	487.3	0	-4,-2	-	-	15.782	MINOR
ENSMUSG00000018363	Smurf2	ENSMUST00000139297	ENSMUSP00000156224	TRANSLATION	nonsense_mediated_decay	-	-	5	68	2	2	0	48.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018363	Smurf2	ENSMUST00000092517	ENSMUSP00000090177	TRANSLATION	protein_coding	-	CCDS25564.1	1	748	7	15.65	6.4	505	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000018363	Smurf2	ENSMUST00000167787	ENSMUSP00000129269	TRANSLATION	protein_coding	-	CCDS25564.1	1	748	7	15.65	6.4	505	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000018363	Smurf2	ENSMUST00000144027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018363	Smurf2	ENSMUST00000130688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020412	Ascc2	ENSMUST00000070257	ENSMUSP00000063272	TRANSLATION	protein_coding	-	CCDS24387.1	1	749	0	1	1.5	41.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020412	Ascc2	ENSMUST00000109930	ENSMUSP00000105556	TRANSLATION	protein_coding	-	-	1	709	0	1	0	41.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020826	Nos2	ENSMUST00000018610	ENSMUSP00000018610	TRANSLATION	protein_coding	-	CCDS25115.1	1	1144	80	9.75	1.5	1100.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000020826	Nos2	ENSMUST00000214397	ENSMUSP00000150558	TRANSLATION	protein_coding	-	-	5	1143	80	9.75	1.5	1100.8	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000020826	Nos2	ENSMUST00000208783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020295	Hbq1a	ENSMUST00000020535	ENSMUSP00000020535	TRANSLATION	protein_coding	-	CCDS24525.1	1	145	20	2.8	0.5	80.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020774	Aspa	ENSMUST00000134079	ENSMUSP00000121135	TRANSLATION	protein_coding	stop	-	3	163	8	2.75	0	137	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020774	Aspa	ENSMUST00000141898	ENSMUSP00000118109	TRANSLATION	nonsense_mediated_decay	-	-	3	106	6	1.15	0	72.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020774	Aspa	ENSMUST00000184572	ENSMUSP00000139318	TRANSLATION	protein_coding	-	CCDS25005.1	5	312	11	6.5	7.5	234.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020774	Aspa	ENSMUST00000155630	ENSMUSP00000139131	TRANSLATION	protein_coding	stop	-	5	196	9	4	0	162.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020774	Aspa	ENSMUST00000021119	ENSMUSP00000021119	TRANSLATION	protein_coding	-	CCDS25005.1	1	312	11	6.5	7.5	234.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020774	Aspa	ENSMUST00000132774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044352	Sowaha	ENSMUST00000104955	ENSMUSP00000100561	TRANSLATION	protein_coding	-	CCDS24681.2	-	548	0	0	0.5	42.6	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000000263	Glra1	ENSMUST00000102716	ENSMUSP00000099777	TRANSLATION	protein_coding	-	CCDS24715.1	1	449	8	6.5	11.6	296.3	3	-3,-5	-	-	21.472	PRINCIPAL:3
ENSMUSG00000000263	Glra1	ENSMUST00000075603	ENSMUSP00000075032	TRANSLATION	protein_coding	-	CCDS70190.1	1	457	8	6.5	12.8	298.3	3	-3,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000000263	Glra1	ENSMUST00000108853	ENSMUSP00000104481	TRANSLATION	protein_coding	-	-	5	366	8	4.25	1.2	260	3	-4,-5	-	-	11.27	MINOR
ENSMUSG00000025793	Hgs	ENSMUST00000135231	ENSMUSP00000115037	TRANSLATION	protein_coding	start/stop	-	5	294	0	2.065	0	72.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025793	Hgs	ENSMUST00000141826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025793	Hgs	ENSMUST00000140862	ENSMUSP00000119396	TRANSLATION	protein_coding	stop	-	5	245	8	6.3	0	192.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025793	Hgs	ENSMUST00000106205	ENSMUSP00000101811	TRANSLATION	protein_coding	-	-	5	775	8	9.865	2.9	357.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000025793	Hgs	ENSMUST00000106203	ENSMUSP00000101809	TRANSLATION	protein_coding	-	CCDS49005.1	5	776	8	9.865	2.9	357.3	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000070380	Olfr401	ENSMUST00000079827	ENSMUSP00000078756	TRANSLATION	protein_coding	-	CCDS25025.1	-	315	0	0.36	5.1	171.3	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070380	Olfr401	ENSMUST00000213754	ENSMUSP00000149542	TRANSLATION	protein_coding	-	CCDS25025.1	5	315	0	0.36	5.1	171.3	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032878	Ccdc85a	ENSMUST00000093253	ENSMUSP00000090941	TRANSLATION	protein_coding	-	CCDS24489.1	1	500	0	0	1.7	316.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000032878	Ccdc85a	ENSMUST00000109502	ENSMUSP00000105128	TRANSLATION	protein_coding	-	-	1	432	0	0	0	253.2	0	-4,-5	-	-	2.19	MINOR
ENSMUSG00000032878	Ccdc85a	ENSMUST00000160016	ENSMUSP00000125648	TRANSLATION	protein_coding	start	-	5	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032878	Ccdc85a	ENSMUST00000140601	ENSMUSP00000124184	TRANSLATION	protein_coding	start	-	3	144	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032878	Ccdc85a	ENSMUST00000146385	ENSMUSP00000124972	TRANSLATION	protein_coding	-	CCDS83786.1	5	545	0	0	2.7	316.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032878	Ccdc85a	ENSMUST00000042534	ENSMUSP00000044649	TRANSLATION	protein_coding	-	CCDS48760.1	1	460	0	0	1.7	316.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032878	Ccdc85a	ENSMUST00000109501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078622	Ccdc47	ENSMUST00000002043	ENSMUSP00000002043	TRANSLATION	protein_coding	-	CCDS25551.1	1	483	0	0	12.8	315.2	0	3,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000078622	Ccdc47	ENSMUST00000137915	ENSMUSP00000117127	TRANSLATION	protein_coding	stop	-	2	138	0	0	0	94	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078622	Ccdc47	ENSMUST00000106865	ENSMUSP00000102478	TRANSLATION	protein_coding	-	-	1	167	0	0	0	114.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078622	Ccdc47	ENSMUST00000125383	ENSMUSP00000122736	TRANSLATION	protein_coding	start	-	2	224	0	0	0	168.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078622	Ccdc47	ENSMUST00000153982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001445	Mrpl10	ENSMUST00000054252	ENSMUSP00000103244	TRANSLATION	protein_coding	-	-	5	184	0	4	0	0	0	-4,0	-	-	1.998	MINOR
ENSMUSG00000001445	Mrpl10	ENSMUST00000001485	ENSMUSP00000001485	TRANSLATION	protein_coding	-	CCDS25312.1	1	262	0	6	5.1	0	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000002059	Rab34	ENSMUST00000056241	ENSMUSP00000059769	TRANSLATION	protein_coding	-	-	5	251	20	4.74	1.2	133.2	0	-4,-2	-	-	14.205	MINOR
ENSMUSG00000002059	Rab34	ENSMUST00000002128	ENSMUSP00000002128	TRANSLATION	protein_coding	-	CCDS25094.1	1	259	23	5.07	10.5	153.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000002059	Rab34	ENSMUST00000108322	ENSMUSP00000103958	TRANSLATION	protein_coding	-	CCDS25094.1	1	259	23	5.07	10.5	153.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000002059	Rab34	ENSMUST00000148603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002059	Rab34	ENSMUST00000207728	ENSMUSP00000146997	TRANSLATION	protein_coding	-	-	2	188	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000002059	Rab34	ENSMUST00000154542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002059	Rab34	ENSMUST00000126864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002059	Rab34	ENSMUST00000150941	ENSMUSP00000123033	TRANSLATION	protein_coding	start/stop	-	5	265	23	5.07	0	153.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002059	Rab34	ENSMUST00000156435	ENSMUSP00000122848	TRANSLATION	protein_coding	start	-	3	199	23	4.57	0	144.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020866	Cacna1g	ENSMUST00000107785	ENSMUSP00000103414	TRANSLATION	protein_coding	-	-	5	2176	0	12.75	0	857.7	28	-4,-5	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000146160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020866	Cacna1g	ENSMUST00000133331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020866	Cacna1g	ENSMUST00000100561	ENSMUSP00000098127	TRANSLATION	protein_coding	-	CCDS25255.1	1	2295	0	12.85	1.7	855.3	28	-4,-5	-	-	11.856	PRINCIPAL:3
ENSMUSG00000020866	Cacna1g	ENSMUST00000142190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020866	Cacna1g	ENSMUST00000107792	ENSMUSP00000103421	TRANSLATION	protein_coding	-	-	5	2247	0	12.42	1.7	857.7	28	-4,-5	-	-	11.142	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000021234	ENSMUSP00000021234	TRANSLATION	protein_coding	-	CCDS48885.1	5	2272	0	12.85	1.7	857.7	28	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000103166	ENSMUSP00000099455	TRANSLATION	protein_coding	-	-	5	2288	0	12.52	1.7	855.3	28	-4,-5	-	-	11.196	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000107790	ENSMUSP00000103419	TRANSLATION	protein_coding	-	CCDS48886.1	1	2265	0	12.52	1.7	857.7	28	-4,-5	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000107793	ENSMUSP00000103422	TRANSLATION	protein_coding	-	-	5	2277	0	12.75	1.7	855.3	28	-4,-5	-	-	11.658	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000107786	ENSMUSP00000103415	TRANSLATION	protein_coding	-	CCDS48884.1	1	2248	0	12.52	1.7	823.7	25	-4,-5	-	-	9.3	MINOR
ENSMUSG00000020866	Cacna1g	ENSMUST00000133000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020866	Cacna1g	ENSMUST00000152811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020866	Cacna1g	ENSMUST00000107788	ENSMUSP00000103417	TRANSLATION	protein_coding	-	-	5	2270	0	12.42	1.7	855.3	28	-4,-5	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000107791	ENSMUSP00000103420	TRANSLATION	protein_coding	-	-	5	2254	0	12.75	1.7	857.7	28	-4,-5	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000020866	Cacna1g	ENSMUST00000107789	ENSMUSP00000103418	TRANSLATION	protein_coding	-	-	5	2381	0	12.52	1.7	855.3	28	-4,-5	-	-	11.196	ALTERNATIVE:2
ENSMUSG00000054986	Sec14l3	ENSMUST00000068322	ENSMUSP00000065084	TRANSLATION	protein_coding	-	CCDS24375.1	1	401	0	10	8.8	129.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000054986	Sec14l3	ENSMUST00000123208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054986	Sec14l3	ENSMUST00000129330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054986	Sec14l3	ENSMUST00000126396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054986	Sec14l3	ENSMUST00000125898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038057	Dbil5	ENSMUST00000040806	ENSMUSP00000039763	TRANSLATION	protein_coding	-	CCDS25062.1	1	87	8	1	14.9	81.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000053930	Shisa6	ENSMUST00000066679	ENSMUSP00000071025	TRANSLATION	protein_coding	-	CCDS24848.1	1	525	0	0.2	0.5	138.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000053930	Shisa6	ENSMUST00000123454	ENSMUSP00000120862	TRANSLATION	protein_coding	start	-	1	501	0	0.2	0	138.2	0	-2,2	-	-	-1	MINOR
ENSMUSG00000053930	Shisa6	ENSMUST00000134562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078921	Tgtp2	ENSMUST00000046745	ENSMUSP00000045025	TRANSLATION	protein_coding	-	CCDS48781.1	1	415	14	1	0.5	585.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078921	Tgtp2	ENSMUST00000128411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041592	Sdk2	ENSMUST00000041627	ENSMUSP00000038972	TRANSLATION	protein_coding	-	CCDS25605.1	1	2176	0	32.07	1.5	821	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000041592	Sdk2	ENSMUST00000141943	ENSMUSP00000116872	TRANSLATION	protein_coding	stop	-	1	895	0	15.89	0	337.6	0	3,-3	-	-	-1	MINOR
ENSMUSG00000041592	Sdk2	ENSMUST00000156955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041592	Sdk2	ENSMUST00000155651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041592	Sdk2	ENSMUST00000144301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041592	Sdk2	ENSMUST00000125879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075420	Smim6	ENSMUST00000132961	ENSMUSP00000133699	TRANSLATION	protein_coding	-	CCDS56821.1	1	56	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000020868	Xylt2	ENSMUST00000116349	ENSMUSP00000112052	TRANSLATION	protein_coding	-	CCDS48888.1	1	865	0	1.94	6.3	425.1	0	-1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000020868	Xylt2	ENSMUST00000150377	ENSMUSP00000134495	TRANSLATION	protein_coding	start/stop	-	5	145	0	0	0	85.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020868	Xylt2	ENSMUST00000153485	ENSMUSP00000122581	TRANSLATION	nonsense_mediated_decay	-	-	5	607	0	1.94	0	251.7	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000020868	Xylt2	ENSMUST00000174178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020868	Xylt2	ENSMUST00000154830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020868	Xylt2	ENSMUST00000146693	ENSMUSP00000122728	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000048013	Krt35	ENSMUST00000103127	ENSMUSP00000099416	TRANSLATION	protein_coding	-	CCDS25407.2	1	455	0	4.22	8.8	366.7	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000048013	Krt35	ENSMUST00000173988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055546	Timd4	ENSMUST00000068877	ENSMUSP00000069456	TRANSLATION	protein_coding	-	CCDS36137.1	1	343	3	1	0.5	50.9	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000038909	Kat7	ENSMUST00000143171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038909	Kat7	ENSMUST00000138671	ENSMUSP00000121772	TRANSLATION	protein_coding	start	-	3	150	24	3.5	0	246.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038909	Kat7	ENSMUST00000072621	ENSMUSP00000072416	TRANSLATION	protein_coding	-	-	5	583	29	7.55	0.5	338.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000038909	Kat7	ENSMUST00000146365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038909	Kat7	ENSMUST00000092766	ENSMUSP00000090441	TRANSLATION	protein_coding	-	-	5	613	29	7.55	1.5	338.8	0	-4,-5	-	-	18.18	MINOR
ENSMUSG00000038909	Kat7	ENSMUST00000149356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038909	Kat7	ENSMUST00000144456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038909	Kat7	ENSMUST00000107734	ENSMUSP00000103362	TRANSLATION	protein_coding	-	CCDS56799.1	1	611	29	7.55	12	338.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000038909	Kat7	ENSMUST00000103159	ENSMUSP00000099448	TRANSLATION	protein_coding	-	CCDS25275.1	1	522	29	7.55	0.5	338.8	0	-4,-6	-	-	18	MINOR
ENSMUSG00000038909	Kat7	ENSMUST00000107733	ENSMUSP00000103361	TRANSLATION	protein_coding	-	CCDS56798.1	1	581	29	7.55	7.8	338.8	0	-4,-6	-	-	20.472	MINOR
ENSMUSG00000038909	Kat7	ENSMUST00000154327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046275	Trarg1	ENSMUST00000062024	ENSMUSP00000061634	TRANSLATION	protein_coding	-	CCDS25069.1	1	173	0	0	5.1	75.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000000204	Slfn4	ENSMUST00000000208	ENSMUSP00000000208	TRANSLATION	protein_coding	-	CCDS25158.1	1	602	0	0	0.5	39.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000204	Slfn4	ENSMUST00000215472	ENSMUSP00000150793	TRANSLATION	protein_coding	-	-	1	209	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000000204	Slfn4	ENSMUST00000167596	ENSMUSP00000132595	TRANSLATION	protein_coding	-	CCDS25158.1	1	602	0	0	0.5	39.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050201	Otop2	ENSMUST00000055490	ENSMUSP00000062109	TRANSLATION	protein_coding	-	CCDS25628.1	1	563	0	0	3.9	183.6	8	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000050201	Otop2	ENSMUST00000139466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050201	Otop2	ENSMUST00000131050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050201	Otop2	ENSMUST00000106544	ENSMUSP00000102154	TRANSLATION	protein_coding	-	CCDS25628.1	1	563	0	0	3.9	183.6	8	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000069721	Krtap3-2	ENSMUST00000092699	ENSMUSP00000090373	TRANSLATION	protein_coding	-	CCDS25386.1	-	99	0	0	7.5	158.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000044072	Eml6	ENSMUST00000169980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044072	Eml6	ENSMUST00000137689	ENSMUSP00000116197	TRANSLATION	nonsense_mediated_decay	start	-	5	83	0	0.81	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044072	Eml6	ENSMUST00000142651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044072	Eml6	ENSMUST00000109452	ENSMUSP00000105078	TRANSLATION	nonsense_mediated_decay	start	-	3	88	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000044072	Eml6	ENSMUST00000137017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044072	Eml6	ENSMUST00000058902	ENSMUSP00000051080	TRANSLATION	protein_coding	-	-	5	1958	0	16.648	9.6	421.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000044072	Eml6	ENSMUST00000123881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020818	Mfsd11	ENSMUST00000151944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020818	Mfsd11	ENSMUST00000136012	ENSMUSP00000118203	TRANSLATION	nonsense_mediated_decay	-	-	2	114	0	0	0	82.5	6	-2,-5	-	-	-1	MINOR
ENSMUSG00000020818	Mfsd11	ENSMUST00000106363	ENSMUSP00000101971	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0	0	82.3	6	-2,-5	-	-	-1	MINOR
ENSMUSG00000020818	Mfsd11	ENSMUST00000021173	ENSMUSP00000021173	TRANSLATION	protein_coding	-	CCDS25681.1	1	449	0	0	7.5	184.1	20	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020818	Mfsd11	ENSMUST00000153084	ENSMUSP00000123368	TRANSLATION	protein_coding	-	-	5	397	0	0	1.2	106.5	18	-2,-5	-	-	1.437	MINOR
ENSMUSG00000020818	Mfsd11	ENSMUST00000106365	ENSMUSP00000101973	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	0	0	82.5	6	-2,-5	-	-	-1	MINOR
ENSMUSG00000020818	Mfsd11	ENSMUST00000126661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020818	Mfsd11	ENSMUST00000147404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020818	Mfsd11	ENSMUST00000135135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020818	Mfsd11	ENSMUST00000139954	ENSMUSP00000118112	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	82.5	6	-2,-5	-	-	-1	MINOR
ENSMUSG00000020818	Mfsd11	ENSMUST00000134106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020818	Mfsd11	ENSMUST00000125920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020405	Fabp6	ENSMUST00000020672	ENSMUSP00000020672	TRANSLATION	protein_coding	-	CCDS24560.1	1	128	0	3.25	14.8	267	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057890	Olfr1375	ENSMUST00000073543	ENSMUSP00000144756	TRANSLATION	protein_coding	-	CCDS83801.1	-	313	0	0.42	1.5	199.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001901	Kcnh6	ENSMUST00000140695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001901	Kcnh6	ENSMUST00000145539	ENSMUSP00000137675	TRANSLATION	nonsense_mediated_decay	-	-	1	775	0	10.05	0.5	244.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000001901	Kcnh6	ENSMUST00000106903	ENSMUSP00000102516	TRANSLATION	protein_coding	-	-	5	897	0	8.32	0	187	6	-4,-7	-	-	5.07	MINOR
ENSMUSG00000001901	Kcnh6	ENSMUST00000001965	ENSMUSP00000001965	TRANSLATION	protein_coding	-	CCDS25545.1	1	950	0	9.32	1.5	244.8	7	-4,-7	-	-	10.542	PRINCIPAL:1
ENSMUSG00000069607	Cd300ld3	ENSMUST00000092459	ENSMUSP00000090116	TRANSLATION	protein_coding	-	CCDS25617.1	1	245	0	1	0.5	52.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000048445	Ccdc57	ENSMUST00000143895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048445	Ccdc57	ENSMUST00000150640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048445	Ccdc57	ENSMUST00000056781	ENSMUSP00000050996	TRANSLATION	protein_coding	-	CCDS25760.1	1	1016	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000018585	Atox1	ENSMUST00000138412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018585	Atox1	ENSMUST00000108857	ENSMUSP00000104485	TRANSLATION	protein_coding	-	CCDS36158.1	1	68	2	1.75	17.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000097886	Gsg1l2	ENSMUST00000155317	ENSMUSP00000145865	TRANSLATION	protein_coding	stop	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000097886	Gsg1l2	ENSMUST00000181566	ENSMUSP00000137895	TRANSLATION	protein_coding	-	CCDS83823.1	5	290	0	0	1.5	144.9	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000020359	Phykpl	ENSMUST00000109105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020359	Phykpl	ENSMUST00000156128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020359	Phykpl	ENSMUST00000164864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020359	Phykpl	ENSMUST00000169995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020359	Phykpl	ENSMUST00000020625	ENSMUSP00000020625	TRANSLATION	protein_coding	-	-	1	468	14	8.5	0	269.2	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020359	Phykpl	ENSMUST00000167797	ENSMUSP00000132190	TRANSLATION	protein_coding	-	CCDS24653.1	1	467	14	8.5	0.5	269.2	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000020359	Phykpl	ENSMUST00000101250	ENSMUSP00000098808	TRANSLATION	nonsense_mediated_decay	-	-	1	231	8	4.41	0	92.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020359	Phykpl	ENSMUST00000169823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020919	Stat5b	ENSMUST00000107358	ENSMUSP00000102981	TRANSLATION	protein_coding	-	CCDS25438.1	1	786	0	14.57	10.8	720.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020919	Stat5b	ENSMUST00000126266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020919	Stat5b	ENSMUST00000004143	ENSMUSP00000004143	TRANSLATION	protein_coding	-	CCDS25438.1	1	786	0	14.57	10.8	720.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000043648	Pld6	ENSMUST00000051493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043648	Pld6	ENSMUST00000125307	ENSMUSP00000115503	TRANSLATION	protein_coding	-	CCDS70199.1	1	221	4	2	1.5	95.9	0	1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000093	Tbx2	ENSMUST00000000095	ENSMUSP00000000095	TRANSLATION	protein_coding	-	CCDS36266.1	1	711	0	3.35	0.5	359.8	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072553	Gm525	ENSMUST00000100619	ENSMUSP00000098184	TRANSLATION	protein_coding	-	CCDS36279.1	1	90	0	0	6	157.8	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000072553	Gm525	ENSMUST00000127186	ENSMUSP00000121160	TRANSLATION	protein_coding	start	-	5	65	0	0	0	139.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000167667	ENSMUSP00000130951	TRANSLATION	nonsense_mediated_decay	-	-	5	46	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000140706	ENSMUSP00000122412	TRANSLATION	protein_coding	stop	-	2	110	2	0.066	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000137614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035086	Becn1	ENSMUST00000164036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035086	Becn1	ENSMUST00000167818	ENSMUSP00000131629	TRANSLATION	nonsense_mediated_decay	-	-	5	46	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000130916	ENSMUSP00000119369	TRANSLATION	protein_coding	-	CCDS25462.1	1	448	2	7.726	15	496	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035086	Becn1	ENSMUST00000041403	ENSMUSP00000040094	TRANSLATION	nonsense_mediated_decay	-	-	1	105	2	0.066	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000135805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035086	Becn1	ENSMUST00000140286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035086	Becn1	ENSMUST00000122817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035086	Becn1	ENSMUST00000170502	ENSMUSP00000128413	TRANSLATION	protein_coding	-	-	1	105	2	0.066	0	0	0	-4,-7	-	-	2	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000172233	ENSMUSP00000129156	TRANSLATION	protein_coding	-	-	5	277	2	4.396	1.2	241.4	0	-4,-7	-	-	2.056	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000126195	ENSMUSP00000122168	TRANSLATION	nonsense_mediated_decay	start	-	3	168	0	2	0	114.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000129863	ENSMUSP00000116580	TRANSLATION	protein_coding	start/stop	-	5	125	0	2.396	0	184.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035086	Becn1	ENSMUST00000136535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035086	Becn1	ENSMUST00000139669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035086	Becn1	ENSMUST00000139997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020548	1700086D15Rik	ENSMUST00000108696	ENSMUSP00000104336	TRANSLATION	protein_coding	-	-	2	151	0	0	0	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020548	1700086D15Rik	ENSMUST00000020855	ENSMUSP00000020855	TRANSLATION	protein_coding	-	-	5	151	0	0	0	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020455	Trim11	ENSMUST00000108810	ENSMUSP00000104438	TRANSLATION	protein_coding	-	CCDS70195.1	1	483	12	4.35	0.5	213.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000020455	Trim11	ENSMUST00000108809	ENSMUSP00000104437	TRANSLATION	protein_coding	-	-	1	253	12	2.53	0	84.3	0	-4,-5	-	-	8.358	MINOR
ENSMUSG00000020455	Trim11	ENSMUST00000093061	ENSMUSP00000090749	TRANSLATION	protein_coding	-	CCDS36168.1	1	467	12	4.33	7.5	213.8	0	-4,-5	-	-	20.958	PRINCIPAL:1
ENSMUSG00000020705	Ddx42	ENSMUST00000152860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020705	Ddx42	ENSMUST00000021046	ENSMUSP00000021046	TRANSLATION	protein_coding	-	CCDS48956.1	1	929	18	8.5	1.5	261.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000061952	Olfr1377	ENSMUST00000216101	ENSMUSP00000151087	TRANSLATION	protein_coding	-	CCDS24645.1	3	307	0	0.42	1.5	173.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061952	Olfr1377	ENSMUST00000075177	ENSMUSP00000074672	TRANSLATION	protein_coding	-	CCDS24645.1	-	307	0	0.42	1.5	173.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061952	Olfr1377	ENSMUST00000213291	ENSMUSP00000149125	TRANSLATION	protein_coding	-	CCDS24645.1	5	307	0	0.42	1.5	173.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070388	Fbxo39	ENSMUST00000108504	ENSMUSP00000104144	TRANSLATION	protein_coding	-	CCDS36214.1	5	443	0	0	3.9	29.1	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000041126	H2az2	ENSMUST00000093346	ENSMUSP00000091037	TRANSLATION	protein_coding	-	CCDS83779.1	1	90	0	2.25	4.1	49.3	0	-4,-6	-	-	6.46	MINOR
ENSMUSG00000041126	H2az2	ENSMUST00000109737	ENSMUSP00000105359	TRANSLATION	protein_coding	-	CCDS48750.1	1	128	0	3.25	21.5	118.4	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000048919	Olfr223	ENSMUST00000215626	ENSMUSP00000149991	TRANSLATION	protein_coding	-	CCDS24773.1	5	319	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000048919	Olfr223	ENSMUST00000061293	ENSMUSP00000054824	TRANSLATION	protein_coding	-	CCDS24773.1	-	319	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000002699	Lcp2	ENSMUST00000133120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002699	Lcp2	ENSMUST00000109329	ENSMUSP00000104952	TRANSLATION	protein_coding	-	-	1	523	0	5.1	0	87.6	0	-4,-5	-	-	10.59	MINOR
ENSMUSG00000002699	Lcp2	ENSMUST00000146318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002699	Lcp2	ENSMUST00000052413	ENSMUSP00000056621	TRANSLATION	protein_coding	-	CCDS48768.1	1	533	0	5.7	0.5	90.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034121	Mks1	ENSMUST00000130135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034121	Mks1	ENSMUST00000135369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034121	Mks1	ENSMUST00000153729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034121	Mks1	ENSMUST00000149256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034121	Mks1	ENSMUST00000038196	ENSMUSP00000043790	TRANSLATION	protein_coding	-	CCDS36271.1	1	561	0	0	7.5	157.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000053184	Spaca3	ENSMUST00000103223	ENSMUSP00000099512	TRANSLATION	protein_coding	-	CCDS25136.1	1	163	5	3.5	3.9	142.6	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000053184	Spaca3	ENSMUST00000103222	ENSMUSP00000099511	TRANSLATION	protein_coding	-	CCDS25136.1	1	163	5	3.5	3.9	142.6	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000039640	Mrpl12	ENSMUST00000043627	ENSMUSP00000044417	TRANSLATION	protein_coding	-	CCDS25737.1	1	201	0	3.525	2.9	44.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000039640	Mrpl12	ENSMUST00000137619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020381	Mrnip	ENSMUST00000020647	ENSMUSP00000020647	TRANSLATION	protein_coding	-	CCDS48784.1	1	335	4	0	0.5	104.5	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000020381	Mrnip	ENSMUST00000123164	ENSMUSP00000115263	TRANSLATION	nonsense_mediated_decay	start	-	3	103	4	0	0	98.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020381	Mrnip	ENSMUST00000143480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036620	Mgat4b	ENSMUST00000151803	ENSMUSP00000116802	TRANSLATION	nonsense_mediated_decay	start	-	5	252	0	0	0	288.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036620	Mgat4b	ENSMUST00000122977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036620	Mgat4b	ENSMUST00000147468	ENSMUSP00000119786	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000036620	Mgat4b	ENSMUST00000041725	ENSMUSP00000043346	TRANSLATION	protein_coding	-	CCDS24630.1	1	548	0	0	8.8	448.8	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000036620	Mgat4b	ENSMUST00000133714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018412	Kansl1	ENSMUST00000106971	ENSMUSP00000102584	TRANSLATION	protein_coding	-	-	5	1099	0	0	1.5	137.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018412	Kansl1	ENSMUST00000018556	ENSMUSP00000018556	TRANSLATION	protein_coding	-	CCDS48953.1	1	1036	0	0	1.5	137.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000018412	Kansl1	ENSMUST00000069188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018412	Kansl1	ENSMUST00000106972	ENSMUSP00000102585	TRANSLATION	protein_coding	-	-	5	1099	0	0	1.5	137.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018412	Kansl1	ENSMUST00000134266	ENSMUSP00000116367	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018412	Kansl1	ENSMUST00000106977	ENSMUSP00000102590	TRANSLATION	protein_coding	-	CCDS48953.1	1	1036	0	0	1.5	137.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000069874	Irgm2	ENSMUST00000108836	ENSMUSP00000104464	TRANSLATION	protein_coding	-	CCDS48803.1	1	395	15	0.48	0.5	538.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000069874	Irgm2	ENSMUST00000058704	ENSMUSP00000056001	TRANSLATION	protein_coding	-	CCDS48803.1	2	395	15	0.48	0.5	538.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000069874	Irgm2	ENSMUST00000209079	ENSMUSP00000146805	TRANSLATION	protein_coding	-	-	2	407	15	0.48	0	538.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020149	Rab1a	ENSMUST00000132285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020149	Rab1a	ENSMUST00000152728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020149	Rab1a	ENSMUST00000163483	ENSMUSP00000127330	TRANSLATION	protein_coding	-	CCDS36115.1	1	205	21	4.75	19.5	225.6	0	-4,-7	-	-	22	PRINCIPAL:2
ENSMUSG00000020149	Rab1a	ENSMUST00000020358	ENSMUSP00000020358	TRANSLATION	protein_coding	-	-	1	202	21	4.75	19.5	225.6	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000020149	Rab1a	ENSMUST00000109602	ENSMUSP00000105231	TRANSLATION	protein_coding	-	-	5	138	14	2.75	0	83.3	0	-4,-6	-	-	3.33	MINOR
ENSMUSG00000020149	Rab1a	ENSMUST00000109601	ENSMUSP00000105230	TRANSLATION	protein_coding	-	-	5	126	14	2.75	2.4	86.6	0	-4,-7	-	-	3.634	MINOR
ENSMUSG00000039908	Slc26a11	ENSMUST00000147366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039908	Slc26a11	ENSMUST00000050880	ENSMUSP00000050999	TRANSLATION	protein_coding	-	CCDS25717.1	1	593	0	1.56	0.5	363.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039908	Slc26a11	ENSMUST00000123634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039908	Slc26a11	ENSMUST00000151612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018501	Ncor1	ENSMUST00000037575	ENSMUSP00000038900	TRANSLATION	protein_coding	-	-	1	1399	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000161699	ENSMUSP00000124120	TRANSLATION	protein_coding	start/stop	-	3	254	0	2.77	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000069456	ENSMUSP00000068974	TRANSLATION	protein_coding	-	CCDS56782.1	1	291	0	1.6	0.5	122.7	0	-4,-2	-	-	2.976	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000101067	ENSMUSP00000098628	TRANSLATION	protein_coding	-	-	5	2386	4	7.65	0.5	173.1	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000018501	Ncor1	ENSMUST00000159315	ENSMUSP00000124175	TRANSLATION	protein_coding	start	-	2	157	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000161281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000160171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000127471	ENSMUSP00000121806	TRANSLATION	protein_coding	stop	-	5	791	4	7.214	0	173.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000018645	ENSMUSP00000018645	TRANSLATION	protein_coding	-	CCDS56781.1	5	2454	4	7.584	0.5	173.1	0	-4,-2	-	-	15.868	PRINCIPAL:2
ENSMUSG00000018501	Ncor1	ENSMUST00000101068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000124027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000161767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000161288	ENSMUSP00000124045	TRANSLATION	protein_coding	start/stop	-	5	216	0	1.996	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000155712	ENSMUSP00000122654	TRANSLATION	protein_coding	start	-	5	1724	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000155486	ENSMUSP00000122647	TRANSLATION	protein_coding	stop	-	5	541	4	4.364	0	122.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000151498	ENSMUSP00000125317	TRANSLATION	protein_coding	start/stop	-	1	993	4	5.786	0	50.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000162077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000162236	ENSMUSP00000124698	TRANSLATION	protein_coding	start/stop	-	3	261	0	2.296	0	50.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000141447	ENSMUSP00000123822	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018501	Ncor1	ENSMUST00000161116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018501	Ncor1	ENSMUST00000101066	ENSMUSP00000098627	TRANSLATION	protein_coding	-	CCDS56781.1	5	2454	4	7.584	0.5	173.1	0	-4,-2	-	-	15.868	PRINCIPAL:2
ENSMUSG00000018501	Ncor1	ENSMUST00000131911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000159224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018501	Ncor1	ENSMUST00000161432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018501	Ncor1	ENSMUST00000156740	ENSMUSP00000125458	TRANSLATION	protein_coding	start	-	5	1389	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078572	Ndufaf8	ENSMUST00000186913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078572	Ndufaf8	ENSMUST00000106223	ENSMUSP00000101830	TRANSLATION	protein_coding	-	CCDS36388.1	1	74	0	0	6.3	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000078572	Ndufaf8	ENSMUST00000185558	ENSMUSP00000140397	TRANSLATION	protein_coding	-	-	5	86	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000108621	ENSMUSP00000104261	TRANSLATION	protein_coding	-	-	5	420	0	1.939	0	98.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000144431	ENSMUSP00000135926	TRANSLATION	nonsense_mediated_decay	-	-	1	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000128046	ENSMUSP00000137547	TRANSLATION	protein_coding	stop	-	3	77	0	1.329	0	64.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000129234	ENSMUSP00000136835	TRANSLATION	nonsense_mediated_decay	-	-	1	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000137122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000018714	ENSMUSP00000018714	TRANSLATION	protein_coding	-	CCDS83828.1	1	408	0	1.939	0.5	98.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000102580	ENSMUSP00000099640	TRANSLATION	protein_coding	-	CCDS24920.1	1	435	0	1.939	0.5	98.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000142121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018570	2810408A11Rik	ENSMUST00000100969	ENSMUSP00000098529	TRANSLATION	protein_coding	-	CCDS83827.1	1	403	0	1.7378	0.5	90.6	0	-4,-5	-	-	10.902	MINOR
ENSMUSG00000056895	H2bu2	ENSMUST00000078267	ENSMUSP00000076397	TRANSLATION	protein_coding	-	CCDS24754.1	-	126	0	1	8.8	89	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078920	Ifi47	ENSMUST00000109202	ENSMUSP00000104825	TRANSLATION	protein_coding	-	CCDS24595.1	2	420	13	1.8	1.5	582.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078920	Ifi47	ENSMUST00000214804	ENSMUSP00000149108	TRANSLATION	protein_coding	stop	-	3	197	11	1	0	274.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078920	Ifi47	ENSMUST00000046704	ENSMUSP00000041975	TRANSLATION	protein_coding	-	CCDS24595.1	1	420	13	1.8	1.5	582.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078920	Ifi47	ENSMUST00000213728	ENSMUSP00000150940	TRANSLATION	protein_coding	-	CCDS24595.1	5	420	13	1.8	1.5	582.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078920	Ifi47	ENSMUST00000152914	ENSMUSP00000150066	TRANSLATION	protein_coding	stop	-	5	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020303	Stc2	ENSMUST00000139991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020303	Stc2	ENSMUST00000149467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020303	Stc2	ENSMUST00000134199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020303	Stc2	ENSMUST00000020546	ENSMUSP00000020546	TRANSLATION	protein_coding	-	CCDS24512.1	1	296	0	0	1.5	304.9	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000020303	Stc2	ENSMUST00000152094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047126	Cltc	ENSMUST00000133501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047126	Cltc	ENSMUST00000060766	ENSMUSP00000050220	TRANSLATION	protein_coding	-	-	5	1679	0	31.5	4.9	901.3	0	-4,-5	-	-	12.844	MINOR
ENSMUSG00000047126	Cltc	ENSMUST00000103186	ENSMUSP00000099475	TRANSLATION	protein_coding	-	CCDS25204.1	1	1675	0	31.5	19.5	901.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000047126	Cltc	ENSMUST00000124385	ENSMUSP00000117674	TRANSLATION	protein_coding	start	-	3	216	0	4.085	0	72.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047126	Cltc	ENSMUST00000134999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047126	Cltc	ENSMUST00000141152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020193	Zpbp	ENSMUST00000020413	ENSMUSP00000020413	TRANSLATION	protein_coding	-	CCDS24434.1	1	408	0	0	1.5	253.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000055805	Fmnl1	ENSMUST00000218163	ENSMUSP00000151439	TRANSLATION	protein_coding	-	-	5	1100	0	20.812	1.5	573.6	0	-4,-6	-	-	11.994	ALTERNATIVE:2
ENSMUSG00000055805	Fmnl1	ENSMUST00000107027	ENSMUSP00000102642	TRANSLATION	protein_coding	-	CCDS36349.1	5	1090	0	20.4	1.5	573.7	0	-4,-6	-	-	11.178	ALTERNATIVE:2
ENSMUSG00000055805	Fmnl1	ENSMUST00000154871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055805	Fmnl1	ENSMUST00000042286	ENSMUSP00000046296	TRANSLATION	protein_coding	-	CCDS36348.1	1	1094	0	20.68	1.5	573.7	0	-4,-6	-	-	11.736	PRINCIPAL:3
ENSMUSG00000055805	Fmnl1	ENSMUST00000129726	ENSMUSP00000133299	TRANSLATION	protein_coding	start/stop	-	3	150	0	2.13	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055805	Fmnl1	ENSMUST00000126425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055805	Fmnl1	ENSMUST00000021322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020722	Cacng1	ENSMUST00000021065	ENSMUSP00000021065	TRANSLATION	protein_coding	-	CCDS25570.1	1	223	0	3.75	3.9	133.9	0	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000034285	Nipsnap1	ENSMUST00000135405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034285	Nipsnap1	ENSMUST00000149603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034285	Nipsnap1	ENSMUST00000038570	ENSMUSP00000049338	TRANSLATION	protein_coding	-	CCDS24392.1	1	284	0	2.572	5.1	113.7	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000034285	Nipsnap1	ENSMUST00000136552	ENSMUSP00000117760	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000034285	Nipsnap1	ENSMUST00000139737	ENSMUSP00000122885	TRANSLATION	protein_coding	stop	-	5	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034285	Nipsnap1	ENSMUST00000141269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060170	Olfr1371	ENSMUST00000075844	ENSMUSP00000075241	TRANSLATION	protein_coding	-	CCDS24668.1	-	311	0	0.36	6.4	161.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000094091	Gm21885	ENSMUST00000208510	ENSMUSP00000153501	TRANSLATION	protein_coding	-	-	5	145	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094091	Gm21885	ENSMUST00000178891	ENSMUSP00000153555	TRANSLATION	protein_coding	start	-	-	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000869	Il4	ENSMUST00000140684	ENSMUSP00000133617	TRANSLATION	protein_coding	-	-	2	45	0	0.675	0	53.1	0	-4,-7	-	-	2.484	MINOR
ENSMUSG00000000869	Il4	ENSMUST00000127858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000869	Il4	ENSMUST00000150568	ENSMUSP00000134414	TRANSLATION	protein_coding	-	-	1	45	0	0.675	0	53.1	0	-4,-7	-	-	2.484	MINOR
ENSMUSG00000000869	Il4	ENSMUST00000000889	ENSMUSP00000000889	TRANSLATION	protein_coding	-	CCDS24682.1	1	140	0	2.775	0.5	136	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000050813	Olfr332	ENSMUST00000180165	ENSMUSP00000136008	TRANSLATION	protein_coding	-	CCDS56772.1	2	344	0	1.76	0.5	187.1	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050813	Olfr332	ENSMUST00000203744	ENSMUSP00000144797	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	27.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000059923	Grb2	ENSMUST00000021090	ENSMUSP00000021090	TRANSLATION	protein_coding	-	CCDS25645.1	1	217	0	5.5	19.5	254	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000059923	Grb2	ENSMUST00000106497	ENSMUSP00000102106	TRANSLATION	protein_coding	-	CCDS25645.1	1	217	0	5.5	19.5	254	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000059923	Grb2	ENSMUST00000106495	ENSMUSP00000102104	TRANSLATION	protein_coding	-	-	5	203	0	5	0	194.4	0	-4,-5	-	-	7.422	MINOR
ENSMUSG00000059923	Grb2	ENSMUST00000135065	ENSMUSP00000117539	TRANSLATION	protein_coding	stop	-	5	71	0	2.25	0	62.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059923	Grb2	ENSMUST00000106499	ENSMUSP00000102108	TRANSLATION	protein_coding	-	-	1	176	0	4.25	1.2	167.3	0	-4,-5	-	-	4.34	MINOR
ENSMUSG00000020892	Aloxe3	ENSMUST00000155324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020892	Aloxe3	ENSMUST00000021268	ENSMUSP00000021268	TRANSLATION	protein_coding	-	CCDS24884.1	1	711	5	13.74	6.3	86.9	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000020892	Aloxe3	ENSMUST00000139257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020892	Aloxe3	ENSMUST00000175661	ENSMUSP00000134814	TRANSLATION	nonsense_mediated_decay	-	-	5	380	0	6.49	0	86.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020892	Aloxe3	ENSMUST00000176087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020892	Aloxe3	ENSMUST00000156874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059248	Septin9	ENSMUST00000106354	ENSMUSP00000101961	TRANSLATION	protein_coding	-	-	5	565	23	8.55	1.5	370.3	0	-4,-5	-	-	18.204	MINOR
ENSMUSG00000059248	Septin9	ENSMUST00000155331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059248	Septin9	ENSMUST00000106349	ENSMUSP00000101956	TRANSLATION	protein_coding	-	CCDS25684.1	1	334	23	8.55	8.4	370.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059248	Septin9	ENSMUST00000127383	ENSMUSP00000120065	TRANSLATION	protein_coding	stop	-	5	242	17	5.55	0	255.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059248	Septin9	ENSMUST00000019038	ENSMUSP00000019038	TRANSLATION	protein_coding	-	CCDS48991.1	1	576	23	8.55	1.5	370.3	0	-4,-5	-	-	18.204	MINOR
ENSMUSG00000059248	Septin9	ENSMUST00000134852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059248	Septin9	ENSMUST00000153668	ENSMUSP00000120382	TRANSLATION	protein_coding	stop	-	2	74	7	1.55	0	38.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059248	Septin9	ENSMUST00000100193	ENSMUSP00000097767	TRANSLATION	protein_coding	-	CCDS25684.1	1	334	23	8.55	8.4	370.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059248	Septin9	ENSMUST00000129387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059248	Septin9	ENSMUST00000093907	ENSMUSP00000091435	TRANSLATION	protein_coding	-	CCDS48990.1	1	583	23	8.55	0.5	370.3	0	-4,-1	-	-	18	MINOR
ENSMUSG00000046491	C1qtnf2	ENSMUST00000173002	ENSMUSP00000134705	TRANSLATION	protein_coding	-	-	5	324	2	2.1	0	172.3	0	-2,0	-	-	14	ALTERNATIVE:2
ENSMUSG00000046491	C1qtnf2	ENSMUST00000151912	ENSMUSP00000133616	TRANSLATION	protein_coding	stop	-	1	137	0	1.6	0	37.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000046491	C1qtnf2	ENSMUST00000057679	ENSMUSP00000051652	TRANSLATION	protein_coding	-	CCDS24558.1	1	294	2	2.1	1.5	172.3	0	4,-1	-	-	14	PRINCIPAL:2
ENSMUSG00000034708	Grn	ENSMUST00000127530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034708	Grn	ENSMUST00000123500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034708	Grn	ENSMUST00000176953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034708	Grn	ENSMUST00000177428	ENSMUSP00000134893	TRANSLATION	protein_coding	start	-	3	335	0	2.7	0	113.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034708	Grn	ENSMUST00000138451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034708	Grn	ENSMUST00000239431	ENSMUSP00000159379	TRANSLATION	protein_coding	-	-	-	589	0	6.8	1	384.8	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034708	Grn	ENSMUST00000125819	ENSMUSP00000134948	TRANSLATION	protein_coding	start	-	3	247	0	2.55	0	135	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034708	Grn	ENSMUST00000129997	ENSMUSP00000135739	TRANSLATION	protein_coding	stop	-	5	214	0	2	0	102.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034708	Grn	ENSMUST00000135517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034708	Grn	ENSMUST00000049460	ENSMUSP00000046340	TRANSLATION	protein_coding	-	CCDS48943.1	1	602	0	6.8	0.5	384.8	0	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000034708	Grn	ENSMUST00000148580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049811	Fam161a	ENSMUST00000173923	ENSMUSP00000133293	TRANSLATION	protein_coding	stop	-	1	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049811	Fam161a	ENSMUST00000208732	ENSMUSP00000146368	TRANSLATION	protein_coding	start	-	5	562	0	0	0	113.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049811	Fam161a	ENSMUST00000172602	ENSMUSP00000134485	TRANSLATION	protein_coding	-	-	2	448	0	0	0	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049811	Fam161a	ENSMUST00000151877	ENSMUSP00000121167	TRANSLATION	protein_coding	start	-	3	287	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049811	Fam161a	ENSMUST00000238880	ENSMUSP00000158891	TRANSLATION	protein_coding	-	CCDS48757.1	-	475	0	0	0.5	113.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000049811	Fam161a	ENSMUST00000094363	ENSMUSP00000091923	TRANSLATION	protein_coding	start	-	1	236	0	0	0	43.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049811	Fam161a	ENSMUST00000109557	ENSMUSP00000105184	TRANSLATION	protein_coding	-	-	2	448	0	0	0	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049811	Fam161a	ENSMUST00000058269	ENSMUSP00000063091	TRANSLATION	protein_coding	-	-	1	448	0	0	0	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020869	Lrrc59	ENSMUST00000138782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020869	Lrrc59	ENSMUST00000021239	ENSMUSP00000021239	TRANSLATION	protein_coding	-	CCDS25261.1	1	307	0	3.45	7.5	42.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035455	Fignl1	ENSMUST00000150714	ENSMUSP00000119528	TRANSLATION	protein_coding	stop	-	2	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035455	Fignl1	ENSMUST00000123815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035455	Fignl1	ENSMUST00000171938	ENSMUSP00000126340	TRANSLATION	protein_coding	-	CCDS24438.1	1	683	14	1	0.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035455	Fignl1	ENSMUST00000152345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035455	Fignl1	ENSMUST00000171080	ENSMUSP00000127489	TRANSLATION	protein_coding	-	CCDS24438.1	2	683	14	1	0.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035455	Fignl1	ENSMUST00000047689	ENSMUSP00000036932	TRANSLATION	protein_coding	-	CCDS24438.1	1	683	14	1	0.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035455	Fignl1	ENSMUST00000109664	ENSMUSP00000105290	TRANSLATION	protein_coding	-	CCDS24438.1	1	683	14	1	0.5	161.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001444	Tbx21	ENSMUST00000001484	ENSMUSP00000001484	TRANSLATION	protein_coding	-	CCDS25315.1	1	530	0	4.15	1.5	262.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020733	Slc9a3r1	ENSMUST00000021077	ENSMUSP00000021077	TRANSLATION	protein_coding	-	CCDS36370.1	1	355	0	5.5	1.5	255.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056427	Slit3	ENSMUST00000069837	ENSMUSP00000066857	TRANSLATION	protein_coding	-	CCDS24542.1	1	1523	0	24.77	7.6	661.1	0	1,1	-	-	15	PRINCIPAL:1
ENSMUSG00000056427	Slit3	ENSMUST00000153098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056427	Slit3	ENSMUST00000156571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056427	Slit3	ENSMUST00000124438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034614	Pik3ip1	ENSMUST00000130747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034614	Pik3ip1	ENSMUST00000139139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034614	Pik3ip1	ENSMUST00000045153	ENSMUSP00000036921	TRANSLATION	protein_coding	-	CCDS24357.1	1	264	0	1.88	1.5	41.8	3	2,-3	-	-	11.106	PRINCIPAL:2
ENSMUSG00000034614	Pik3ip1	ENSMUST00000136536	ENSMUSP00000122407	TRANSLATION	protein_coding	stop	-	5	257	0	2.21	0	41.8	3	2,-3	-	-	-1	MINOR
ENSMUSG00000034614	Pik3ip1	ENSMUST00000138907	ENSMUSP00000121277	TRANSLATION	protein_coding	start	-	3	176	0	1.08	0	28.3	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000034614	Pik3ip1	ENSMUST00000142961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034614	Pik3ip1	ENSMUST00000093399	ENSMUSP00000091100	TRANSLATION	protein_coding	-	-	1	213	0	1.88	0	41.8	3	2,-3	-	-	11.106	ALTERNATIVE:2
ENSMUSG00000034614	Pik3ip1	ENSMUST00000136474	ENSMUSP00000119106	TRANSLATION	protein_coding	stop	-	2	152	0	0.28	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000034614	Pik3ip1	ENSMUST00000149253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034614	Pik3ip1	ENSMUST00000153733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042148	Cox10	ENSMUST00000125702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042148	Cox10	ENSMUST00000049091	ENSMUSP00000040138	TRANSLATION	protein_coding	-	CCDS24839.1	1	443	0	0	1.5	190.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020397	Med7	ENSMUST00000170928	ENSMUSP00000131852	TRANSLATION	protein_coding	-	CCDS36134.1	1	233	0	2.525	12.8	153.8	0	-4,-5	-	-	15.772	PRINCIPAL:1
ENSMUSG00000020397	Med7	ENSMUST00000152119	ENSMUSP00000122182	TRANSLATION	protein_coding	stop	-	2	93	0	1.2	0	66.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020397	Med7	ENSMUST00000109231	ENSMUSP00000104854	TRANSLATION	protein_coding	stop	-	3	173	0	2.625	0	153.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020397	Med7	ENSMUST00000133635	ENSMUSP00000120617	TRANSLATION	protein_coding	stop	-	1	133	0	2	0	128.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020397	Med7	ENSMUST00000128940	ENSMUSP00000116997	TRANSLATION	protein_coding	stop	-	1	157	0	2.225	0	149.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020397	Med7	ENSMUST00000140027	ENSMUSP00000120077	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020397	Med7	ENSMUST00000020665	ENSMUSP00000020665	TRANSLATION	protein_coding	-	CCDS36134.1	1	233	0	2.525	12.8	153.8	0	-4,-5	-	-	15.772	PRINCIPAL:1
ENSMUSG00000020397	Med7	ENSMUST00000156073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020397	Med7	ENSMUST00000109232	ENSMUSP00000104855	TRANSLATION	protein_coding	-	CCDS36134.1	1	233	0	2.525	12.8	153.8	0	-4,-5	-	-	15.772	PRINCIPAL:1
ENSMUSG00000085684	4930469K13Rik	ENSMUST00000224226	ENSMUSP00000153619	TRANSLATION	protein_coding	-	-	-	80	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000085684	4930469K13Rik	ENSMUST00000223852	ENSMUSP00000153341	TRANSLATION	protein_coding	-	-	-	92	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000085684	4930469K13Rik	ENSMUST00000141450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009076	Zmat5	ENSMUST00000154341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009076	Zmat5	ENSMUST00000009220	ENSMUSP00000009220	TRANSLATION	protein_coding	-	CCDS24389.1	1	170	8	0	3.5	62.5	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000009076	Zmat5	ENSMUST00000141970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044949	Ubtd2	ENSMUST00000051053	ENSMUSP00000056765	TRANSLATION	protein_coding	-	CCDS24527.1	1	234	0	2.75	14	181.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000045287	Rtn4rl1	ENSMUST00000102514	ENSMUSP00000099572	TRANSLATION	protein_coding	-	CCDS25043.1	1	445	0	0.8	7.5	122.8	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020454	Eif4enif1	ENSMUST00000135223	ENSMUSP00000122912	TRANSLATION	protein_coding	start/stop	-	3	239	0	0	0	115.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020454	Eif4enif1	ENSMUST00000147534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000125637	ENSMUSP00000118527	TRANSLATION	protein_coding	stop	-	3	194	0	0	0	160.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020454	Eif4enif1	ENSMUST00000132425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000143770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000125224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000110049	ENSMUSP00000105676	TRANSLATION	protein_coding	-	CCDS24354.1	1	983	0	1	7.5	569.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020454	Eif4enif1	ENSMUST00000110048	ENSMUSP00000105675	TRANSLATION	protein_coding	-	CCDS48739.1	5	959	0	1	1.7	561.7	0	-4,-5	-	-	11.838	MINOR
ENSMUSG00000020454	Eif4enif1	ENSMUST00000127950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000131693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020454	Eif4enif1	ENSMUST00000020734	ENSMUSP00000020734	TRANSLATION	protein_coding	-	CCDS48739.1	1	959	0	1	1.7	561.7	0	-4,-5	-	-	11.838	MINOR
ENSMUSG00000020454	Eif4enif1	ENSMUST00000120721	ENSMUSP00000112550	TRANSLATION	protein_coding	-	-	5	808	0	0	1.2	337.7	0	-4,-5	-	-	0.093	MINOR
ENSMUSG00000020454	Eif4enif1	ENSMUST00000179770	ENSMUSP00000136768	TRANSLATION	protein_coding	-	CCDS24354.1	1	983	0	1	7.5	569.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044122	Proca1	ENSMUST00000239287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044122	Proca1	ENSMUST00000108317	ENSMUSP00000103953	TRANSLATION	protein_coding	-	-	5	307	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000044122	Proca1	ENSMUST00000060539	ENSMUSP00000050319	TRANSLATION	protein_coding	-	-	2	65	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000044122	Proca1	ENSMUST00000078099	ENSMUSP00000086022	TRANSLATION	protein_coding	-	CCDS36238.1	1	220	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000044122	Proca1	ENSMUST00000124772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001983	Taco1	ENSMUST00000002048	ENSMUSP00000002048	TRANSLATION	protein_coding	-	CCDS25547.1	1	294	0	5	1.7	212.6	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000084135	Pom121l12	ENSMUST00000117584	ENSMUSP00000147960	TRANSLATION	protein_coding	-	CCDS83783.1	-	278	0	0	0.5	29	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000042678	Myo15	ENSMUST00000081823	ENSMUSP00000080507	TRANSLATION	protein_coding	-	CCDS24793.1	5	2306	15	27.815	0.5	1066.9	0	-4,-7	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000042678	Myo15	ENSMUST00000238401	ENSMUSP00000158855	TRANSLATION	protein_coding	stop	-	-	77	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000042678	Myo15	ENSMUST00000094135	ENSMUSP00000091686	TRANSLATION	protein_coding	-	CCDS48811.1	5	3493	15	27.815	0.5	1066.9	0	-4,-5	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000042678	Myo15	ENSMUST00000126522	ENSMUSP00000120839	TRANSLATION	protein_coding	start/stop	-	1	1784	15	21.905	0	951.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042678	Myo15	ENSMUST00000122825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042678	Myo15	ENSMUST00000071880	ENSMUSP00000071777	TRANSLATION	protein_coding	-	CCDS24792.1	5	3511	15	28.115	0.5	1066.9	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000070374	Olfr59	ENSMUST00000206659	ENSMUSP00000146176	TRANSLATION	protein_coding	stop	-	3	182	0	0.6	0	101.8	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000070374	Olfr59	ENSMUST00000214048	ENSMUSP00000148959	TRANSLATION	protein_coding	-	CCDS25029.1	2	323	0	0.9	1.5	197.7	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070374	Olfr59	ENSMUST00000205790	ENSMUSP00000146212	TRANSLATION	protein_coding	stop	-	3	183	0	0.6	0	101.8	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000070374	Olfr59	ENSMUST00000143976	ENSMUSP00000119877	TRANSLATION	protein_coding	-	CCDS25029.1	3	323	0	0.9	1.5	197.7	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054146	Krt15	ENSMUST00000148502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054146	Krt15	ENSMUST00000107411	ENSMUSP00000103034	TRANSLATION	protein_coding	-	CCDS25410.2	1	456	0	4.525	0.5	395.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001036	Epn2	ENSMUST00000147501	ENSMUSP00000117389	TRANSLATION	protein_coding	stop	-	3	79	9	1.5	0	96.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001036	Epn2	ENSMUST00000108711	ENSMUSP00000104351	TRANSLATION	protein_coding	-	-	5	577	11	3.3	0	176.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000001036	Epn2	ENSMUST00000148956	ENSMUSP00000122514	TRANSLATION	protein_coding	start/stop	-	5	274	2	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001036	Epn2	ENSMUST00000153984	ENSMUSP00000122666	TRANSLATION	protein_coding	start/stop	-	3	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001036	Epn2	ENSMUST00000178202	ENSMUSP00000136553	TRANSLATION	protein_coding	-	CCDS24816.1	5	595	9	3.3	1.5	176.7	0	-4,-7	-	-	16.668	MINOR
ENSMUSG00000001036	Epn2	ENSMUST00000137525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001036	Epn2	ENSMUST00000141335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001036	Epn2	ENSMUST00000108712	ENSMUSP00000104352	TRANSLATION	protein_coding	-	-	5	634	11	3.3	0	176.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000001036	Epn2	ENSMUST00000108713	ENSMUSP00000104353	TRANSLATION	protein_coding	-	CCDS56779.1	1	583	11	3.3	1.5	176.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000001036	Epn2	ENSMUST00000179936	ENSMUSP00000136950	TRANSLATION	protein_coding	-	CCDS56780.1	1	640	11	3.3	1.5	176.7	0	-4,-7	-	-	18	PRINCIPAL:4
ENSMUSG00000001036	Epn2	ENSMUST00000146455	ENSMUSP00000123675	TRANSLATION	protein_coding	stop	-	3	17	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001036	Epn2	ENSMUST00000151545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001036	Epn2	ENSMUST00000001063	ENSMUSP00000001063	TRANSLATION	protein_coding	-	CCDS24816.1	1	595	9	3.3	1.5	176.7	0	-4,-7	-	-	16.668	MINOR
ENSMUSG00000018171	Vmp1	ENSMUST00000150176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018171	Vmp1	ENSMUST00000127267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018171	Vmp1	ENSMUST00000139040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018171	Vmp1	ENSMUST00000143991	ENSMUSP00000118302	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018171	Vmp1	ENSMUST00000123590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018171	Vmp1	ENSMUST00000018315	ENSMUSP00000018315	TRANSLATION	protein_coding	-	CCDS25203.1	1	406	0	0	12.3	34	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000018171	Vmp1	ENSMUST00000153971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018171	Vmp1	ENSMUST00000145846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018168	Ikzf3	ENSMUST00000153902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018168	Ikzf3	ENSMUST00000103141	ENSMUSP00000099430	TRANSLATION	protein_coding	-	CCDS25352.1	5	507	21	2.4	7.5	44.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018168	Ikzf3	ENSMUST00000152400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018168	Ikzf3	ENSMUST00000140876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057058	Skap1	ENSMUST00000123814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057058	Skap1	ENSMUST00000103154	ENSMUSP00000099443	TRANSLATION	protein_coding	-	CCDS25301.1	1	355	7	7.64	1.5	108.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000057058	Skap1	ENSMUST00000100521	ENSMUSP00000098090	TRANSLATION	protein_coding	-	CCDS48892.1	1	345	7	6.64	0.5	71.2	0	-4,-5	-	-	13.758	MINOR
ENSMUSG00000057058	Skap1	ENSMUST00000100519	ENSMUSP00000098088	TRANSLATION	protein_coding	-	-	1	78	0	1.3	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057058	Skap1	ENSMUST00000149988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057058	Skap1	ENSMUST00000127639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057058	Skap1	ENSMUST00000107663	ENSMUSP00000103290	TRANSLATION	protein_coding	-	-	3	126	0	2.11	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057058	Skap1	ENSMUST00000136836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057058	Skap1	ENSMUST00000107662	ENSMUSP00000103289	TRANSLATION	protein_coding	-	-	1	165	0	2.11	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057058	Skap1	ENSMUST00000071510	ENSMUSP00000071445	TRANSLATION	protein_coding	-	CCDS48891.1	1	339	7	7.44	1.5	108.6	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000042200	Cdrt4	ENSMUST00000035854	ENSMUSP00000048844	TRANSLATION	protein_coding	-	CCDS24835.1	1	179	0	0	0.5	196.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050944	Efcab5	ENSMUST00000108400	ENSMUSP00000104037	TRANSLATION	protein_coding	-	CCDS36232.1	5	1406	4	0.14	0.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000050944	Efcab5	ENSMUST00000130901	ENSMUSP00000118152	TRANSLATION	protein_coding	start	-	1	982	4	0.14	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050944	Efcab5	ENSMUST00000148985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050944	Efcab5	ENSMUST00000151731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050944	Efcab5	ENSMUST00000155085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038224	Serpinf2	ENSMUST00000108437	ENSMUSP00000104076	TRANSLATION	protein_coding	-	CCDS25046.1	1	491	0	6.45	0.5	301	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038224	Serpinf2	ENSMUST00000128330	ENSMUSP00000114450	TRANSLATION	protein_coding	stop	-	3	280	0	4.45	0	164.7	0	1,-2	-	-	-1	MINOR
ENSMUSG00000038224	Serpinf2	ENSMUST00000142094	ENSMUSP00000120812	TRANSLATION	nonsense_mediated_decay	-	-	2	61	0	0.45	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000038224	Serpinf2	ENSMUST00000043696	ENSMUSP00000048704	TRANSLATION	protein_coding	-	CCDS25046.1	1	491	0	6.45	0.5	301	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020871	Dlx4	ENSMUST00000021241	ENSMUSP00000021241	TRANSLATION	protein_coding	-	CCDS25273.1	1	240	0	1.4	3.9	72.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020871	Dlx4	ENSMUST00000146838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020734	Grin2c	ENSMUST00000003351	ENSMUSP00000003351	TRANSLATION	protein_coding	-	CCDS25624.1	5	1239	12	10.6	1.5	309.3	3	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020734	Grin2c	ENSMUST00000106554	ENSMUSP00000102164	TRANSLATION	protein_coding	-	CCDS25624.1	5	1239	12	10.6	1.5	309.3	3	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020811	Wscd1	ENSMUST00000132095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020811	Wscd1	ENSMUST00000021168	ENSMUSP00000021168	TRANSLATION	protein_coding	-	CCDS24975.1	1	572	16	0.96	5.1	138	0	-3,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000020811	Wscd1	ENSMUST00000150531	ENSMUSP00000123659	TRANSLATION	protein_coding	stop	-	2	88	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000020811	Wscd1	ENSMUST00000108510	ENSMUSP00000104150	TRANSLATION	protein_coding	-	CCDS24975.1	5	572	16	0.96	5.1	138	0	-3,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000020811	Wscd1	ENSMUST00000108511	ENSMUSP00000104151	TRANSLATION	protein_coding	-	CCDS24975.1	5	572	16	0.96	5.1	138	0	-3,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000020811	Wscd1	ENSMUST00000138339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078812	Eif5a	ENSMUST00000043419	ENSMUSP00000047008	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108612	ENSMUSP00000104252	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000070996	ENSMUSP00000067077	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000152589	ENSMUSP00000123402	TRANSLATION	protein_coding	stop	-	3	149	0	3.75	4	87.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078812	Eif5a	ENSMUST00000108607	ENSMUSP00000104247	TRANSLATION	protein_coding	-	CCDS24923.1	3	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108611	ENSMUSP00000104251	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108610	ENSMUSP00000104250	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000164359	ENSMUSP00000132717	TRANSLATION	protein_coding	-	CCDS24923.1	5	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108613	ENSMUSP00000104253	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000153652	ENSMUSP00000137459	TRANSLATION	protein_coding	-	-	1	76	0	2	0	92.5	0	-4,-5	-	-	8.502	MINOR
ENSMUSG00000078812	Eif5a	ENSMUST00000071026	ENSMUSP00000068651	TRANSLATION	protein_coding	-	CCDS24923.1	1	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108608	ENSMUSP00000104248	TRANSLATION	protein_coding	-	CCDS24923.1	5	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078812	Eif5a	ENSMUST00000108609	ENSMUSP00000104249	TRANSLATION	protein_coding	-	CCDS24923.1	3	154	0	3.75	21.5	92.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000983	Wfdc18	ENSMUST00000139762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000983	Wfdc18	ENSMUST00000135654	ENSMUSP00000137823	TRANSLATION	nonsense_mediated_decay	start	-	3	73	0	0.8	1.5	44.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000983	Wfdc18	ENSMUST00000001009	ENSMUSP00000001009	TRANSLATION	protein_coding	-	CCDS25175.1	1	74	0	0.8	1.5	44.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020467	Efemp1	ENSMUST00000020759	ENSMUSP00000020759	TRANSLATION	protein_coding	-	CCDS48761.1	1	493	32	5.36	3.9	172.7	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000020467	Efemp1	ENSMUST00000124103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020467	Efemp1	ENSMUST00000139713	ENSMUSP00000114757	TRANSLATION	protein_coding	start	-	3	198	8	1.96	0	59	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037393	Nmur2	ENSMUST00000037682	ENSMUSP00000044718	TRANSLATION	protein_coding	-	CCDS24716.1	1	395	0	2.2	1.5	169.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040548	Tex2	ENSMUST00000153870	ENSMUSP00000119568	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040548	Tex2	ENSMUST00000207249	ENSMUSP00000146465	TRANSLATION	protein_coding	start	-	1	629	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000040548	Tex2	ENSMUST00000042780	ENSMUSP00000041985	TRANSLATION	protein_coding	-	CCDS25557.1	1	1128	0	0	0.5	0	2	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000040548	Tex2	ENSMUST00000103070	ENSMUSP00000099359	TRANSLATION	protein_coding	-	-	1	844	0	0	0	0	2	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000040548	Tex2	ENSMUST00000128933	ENSMUSP00000120781	TRANSLATION	protein_coding	stop	-	2	168	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020332	Meikin	ENSMUST00000143919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020332	Meikin	ENSMUST00000094193	ENSMUSP00000091745	TRANSLATION	protein_coding	-	CCDS48798.1	1	434	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000040667	Nup88	ENSMUST00000123917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000123192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000141179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000128193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000108531	ENSMUSP00000104171	TRANSLATION	protein_coding	-	CCDS70233.1	1	747	0	0	0.5	1020.5	0	-4,-5	-	-	5.64	MINOR
ENSMUSG00000040667	Nup88	ENSMUST00000180225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000178369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000133188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000148168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000035283	ENSMUSP00000048101	TRANSLATION	protein_coding	-	CCDS36206.1	1	753	0	0	0.5	1009	0	-4,-5	-	-	4.95	MINOR
ENSMUSG00000040667	Nup88	ENSMUST00000145336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000129615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000138634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040667	Nup88	ENSMUST00000108530	ENSMUSP00000104170	TRANSLATION	protein_coding	-	CCDS36207.1	1	742	0	0	5.1	1026.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040667	Nup88	ENSMUST00000178253	ENSMUSP00000137024	TRANSLATION	nonsense_mediated_decay	start	-	1	122	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036964	Trim17	ENSMUST00000075141	ENSMUSP00000074639	TRANSLATION	protein_coding	-	CCDS24756.1	1	477	16	3.185	1.5	146.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036964	Trim17	ENSMUST00000047697	ENSMUSP00000037248	TRANSLATION	protein_coding	-	-	2	285	16	2.01	0	92.7	0	-4,-5	-	-	12.438	MINOR
ENSMUSG00000035373	Ccl7	ENSMUST00000021011	ENSMUSP00000021011	TRANSLATION	protein_coding	-	CCDS36245.1	1	97	0	2.15	1.5	69.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047988	4933428G20Rik	ENSMUST00000056955	ENSMUSP00000060323	TRANSLATION	protein_coding	-	CCDS79037.1	1	101	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000041231	Ublcp1	ENSMUST00000102795	ENSMUSP00000099859	TRANSLATION	protein_coding	-	CCDS24564.1	1	318	5	8.289	17.3	135.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041231	Ublcp1	ENSMUST00000129054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041231	Ublcp1	ENSMUST00000151875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041231	Ublcp1	ENSMUST00000150032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041231	Ublcp1	ENSMUST00000136709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041231	Ublcp1	ENSMUST00000156551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000108577	ENSMUSP00000104218	TRANSLATION	protein_coding	-	-	5	102	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000108579	ENSMUSP00000104220	TRANSLATION	protein_coding	-	CCDS48832.1	1	122	0	0	1.5	0	0	-4,-5	-	-	0.231	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000150504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000021180	ENSMUSP00000021180	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000100950	ENSMUSP00000098510	TRANSLATION	protein_coding	-	-	2	155	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000148878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000138658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000108578	ENSMUSP00000104219	TRANSLATION	protein_coding	-	CCDS48835.1	1	171	0	0	7.5	0	0	-4,-5	-	-	3	ALTERNATIVE:1
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000108575	ENSMUSP00000104215	TRANSLATION	protein_coding	-	CCDS48831.1	2	109	0	0	1.5	0	0	-4,-5	-	-	0.231	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000102569	ENSMUSP00000099629	TRANSLATION	protein_coding	-	CCDS24940.1	1	137	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:3
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000108576	ENSMUSP00000104216	TRANSLATION	protein_coding	-	CCDS48834.1	2	191	0	0	7.5	0	0	-4,-5	-	-	3	ALTERNATIVE:1
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000135390	ENSMUSP00000134994	TRANSLATION	protein_coding	start	-	2	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000134700	ENSMUSP00000119483	TRANSLATION	protein_coding	start	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020831	0610010K14Rik	ENSMUST00000021181	ENSMUSP00000021181	TRANSLATION	protein_coding	-	CCDS48833.1	1	156	0	0	1.5	0	0	-4,-5	-	-	0.231	MINOR
ENSMUSG00000020436	Gabrg2	ENSMUST00000146198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020436	Gabrg2	ENSMUST00000070735	ENSMUSP00000063812	TRANSLATION	protein_coding	-	CCDS24551.1	1	474	6	5.266	7.5	302.1	2	-2,-4	-	-	20.73	PRINCIPAL:4
ENSMUSG00000020436	Gabrg2	ENSMUST00000070725	ENSMUSP00000064739	TRANSLATION	protein_coding	-	CCDS24552.2	1	466	6	5.2	7.5	306.6	2	-2,-4	-	-	20.868	ALTERNATIVE:1
ENSMUSG00000020436	Gabrg2	ENSMUST00000109290	ENSMUSP00000104913	TRANSLATION	protein_coding	-	-	1	384	6	5.2264	0	300.3	1	-2,-4	-	-	17.544	MINOR
ENSMUSG00000040599	Mis12	ENSMUST00000133413	ENSMUSP00000123291	TRANSLATION	protein_coding	stop	-	2	12	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040599	Mis12	ENSMUST00000048807	ENSMUSP00000039500	TRANSLATION	protein_coding	-	CCDS24973.1	1	206	0	1.66	7.5	96.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040599	Mis12	ENSMUST00000143762	ENSMUSP00000115256	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040599	Mis12	ENSMUST00000136137	ENSMUSP00000121057	TRANSLATION	protein_coding	stop	-	3	17	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040599	Mis12	ENSMUST00000164220	ENSMUSP00000127782	TRANSLATION	protein_coding	-	CCDS24973.1	1	206	0	1.66	7.5	96.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040599	Mis12	ENSMUST00000155236	ENSMUSP00000116762	TRANSLATION	protein_coding	stop	-	3	8	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000153054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018899	Irf1	ENSMUST00000140866	ENSMUSP00000114315	TRANSLATION	protein_coding	stop	-	5	199	0	3.5	0	142.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000138913	ENSMUSP00000118314	TRANSLATION	protein_coding	stop	-	5	62	0	1.75	0	70.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000019043	ENSMUSP00000019043	TRANSLATION	protein_coding	-	CCDS24686.1	1	329	0	3.5	1.5	142.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000018899	Irf1	ENSMUST00000123376	ENSMUSP00000122101	TRANSLATION	protein_coding	stop	-	5	182	0	3.5	0	142.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000133291	ENSMUSP00000116656	TRANSLATION	protein_coding	stop	-	3	132	0	3.5	0	142.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000108920	ENSMUSP00000104548	TRANSLATION	protein_coding	-	CCDS24686.1	1	329	0	3.5	1.5	142.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000018899	Irf1	ENSMUST00000108922	ENSMUSP00000104550	TRANSLATION	protein_coding	-	CCDS48796.1	1	304	0	3.5	0.5	142.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000018899	Irf1	ENSMUST00000142221	ENSMUSP00000118795	TRANSLATION	nonsense_mediated_decay	-	-	2	51	0	0.93	0	25.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018899	Irf1	ENSMUST00000128336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050763	Olfr1395	ENSMUST00000059379	ENSMUSP00000050142	TRANSLATION	protein_coding	-	CCDS24598.1	-	317	0	0.36	5.1	171.2	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050763	Olfr1395	ENSMUST00000203377	ENSMUSP00000145357	TRANSLATION	protein_coding	-	CCDS24598.1	3	317	0	0.36	5.1	171.2	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000050763	Olfr1395	ENSMUST00000214195	ENSMUSP00000150679	TRANSLATION	protein_coding	-	CCDS24598.1	5	317	0	0.36	5.1	171.2	6	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000056648	Hoxb8	ENSMUST00000052650	ENSMUSP00000052496	TRANSLATION	protein_coding	-	CCDS25293.1	1	243	0	1.6	15.7	75.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000056648	Hoxb8	ENSMUST00000168043	ENSMUSP00000128136	TRANSLATION	protein_coding	-	CCDS25293.1	5	243	0	1.6	15.7	75.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000056648	Hoxb8	ENSMUST00000125410	ENSMUSP00000120351	TRANSLATION	protein_coding	stop	-	5	191	0	1	0	44.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018481	Appbp2	ENSMUST00000018625	ENSMUSP00000018625	TRANSLATION	protein_coding	-	CCDS25193.1	1	585	0	2.26	13	58.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020910	Adprm	ENSMUST00000148379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020910	Adprm	ENSMUST00000136013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020910	Adprm	ENSMUST00000127407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020910	Adprm	ENSMUST00000146648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020910	Adprm	ENSMUST00000116363	ENSMUSP00000112064	TRANSLATION	protein_coding	-	CCDS48820.1	1	340	8	2.7	3.9	44.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020910	Adprm	ENSMUST00000146338	ENSMUSP00000137768	TRANSLATION	nonsense_mediated_decay	-	-	2	205	5	0.7	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078252	Krtap17-1	ENSMUST00000105049	ENSMUSP00000100670	TRANSLATION	protein_coding	-	CCDS36330.1	-	109	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020901	Pik3r5	ENSMUST00000126876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020901	Pik3r5	ENSMUST00000021283	ENSMUSP00000021283	TRANSLATION	protein_coding	-	CCDS24865.1	1	871	0	0	1.5	1249.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020901	Pik3r5	ENSMUST00000154220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020901	Pik3r5	ENSMUST00000141716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020901	Pik3r5	ENSMUST00000155887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040528	Milr1	ENSMUST00000182908	ENSMUSP00000138678	TRANSLATION	protein_coding	-	CCDS70335.1	1	208	0	0	0.5	30.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000040528	Milr1	ENSMUST00000147326	ENSMUSP00000138742	TRANSLATION	protein_coding	-	CCDS25560.1	5	246	0	0	0.5	30.5	2	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000040528	Milr1	ENSMUST00000106794	ENSMUSP00000102406	TRANSLATION	protein_coding	-	CCDS70334.1	1	245	0	0	0.5	30.5	2	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000040528	Milr1	ENSMUST00000183111	ENSMUSP00000138513	TRANSLATION	protein_coding	-	CCDS70335.1	1	208	0	0	0.5	30.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000040528	Milr1	ENSMUST00000182023	ENSMUSP00000138286	TRANSLATION	nonsense_mediated_decay	-	-	2	178	0	0	0	30.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040528	Milr1	ENSMUST00000182479	ENSMUSP00000138386	TRANSLATION	protein_coding	start	-	5	143	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040528	Milr1	ENSMUST00000086353	ENSMUSP00000083538	TRANSLATION	protein_coding	-	CCDS25560.1	1	246	0	0	0.5	30.5	2	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000040528	Milr1	ENSMUST00000182896	ENSMUSP00000138617	TRANSLATION	protein_coding	-	CCDS70333.1	1	246	0	0	0.5	30.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000054517	Trim65	ENSMUST00000106440	ENSMUSP00000102048	TRANSLATION	protein_coding	-	-	5	396	12	2.06	0	39.2	0	-4,-5	-	-	14.022	MINOR
ENSMUSG00000054517	Trim65	ENSMUST00000067632	ENSMUSP00000063410	TRANSLATION	protein_coding	-	CCDS48981.1	1	522	12	2.54	0.5	74.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054517	Trim65	ENSMUST00000154061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061086	Myl4	ENSMUST00000155271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061086	Myl4	ENSMUST00000153761	ENSMUSP00000114345	TRANSLATION	protein_coding	stop	-	5	191	7	3.62	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061086	Myl4	ENSMUST00000130588	ENSMUSP00000122748	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061086	Myl4	ENSMUST00000106957	ENSMUSP00000102570	TRANSLATION	protein_coding	-	CCDS25535.1	3	193	7	3.62	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061086	Myl4	ENSMUST00000018800	ENSMUSP00000018800	TRANSLATION	protein_coding	-	CCDS25535.1	1	193	7	3.62	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061086	Myl4	ENSMUST00000106956	ENSMUSP00000102569	TRANSLATION	protein_coding	-	CCDS25535.1	1	193	7	3.62	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061086	Myl4	ENSMUST00000123074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061086	Myl4	ENSMUST00000136244	ENSMUSP00000118284	TRANSLATION	protein_coding	start	-	3	26	3	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078970	Wdr92	ENSMUST00000046955	ENSMUSP00000040938	TRANSLATION	protein_coding	-	CCDS24450.1	1	357	0	8	15.5	20.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078970	Wdr92	ENSMUST00000151431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056962	Jmjd6	ENSMUST00000047616	ENSMUSP00000047570	TRANSLATION	protein_coding	-	CCDS25678.1	1	403	11	6.3	8.9	103.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056962	Jmjd6	ENSMUST00000140349	ENSMUSP00000120850	TRANSLATION	nonsense_mediated_decay	start	-	5	287	11	4.5	0	103.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056962	Jmjd6	ENSMUST00000130120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056962	Jmjd6	ENSMUST00000124831	ENSMUSP00000122867	TRANSLATION	protein_coding	start	-	3	213	3	2.425	0	64	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056962	Jmjd6	ENSMUST00000142495	ENSMUSP00000117922	TRANSLATION	nonsense_mediated_decay	-	-	1	270	8	4	0	72.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056962	Jmjd6	ENSMUST00000141735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056962	Jmjd6	ENSMUST00000140513	ENSMUSP00000115086	TRANSLATION	nonsense_mediated_decay	start	-	1	309	11	4.5	0	103.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001555	Fkbp10	ENSMUST00000001595	ENSMUSP00000001595	TRANSLATION	protein_coding	-	CCDS25422.1	1	581	9	7.47	6.3	399.3	0	1,1	-	-	20	PRINCIPAL:1
ENSMUSG00000001555	Fkbp10	ENSMUST00000134815	ENSMUSP00000123577	TRANSLATION	nonsense_mediated_decay	start	-	5	66	0	0.6	0	23.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001555	Fkbp10	ENSMUST00000107400	ENSMUSP00000103023	TRANSLATION	protein_coding	-	-	5	469	6	5.67	0	307.2	0	1,1	-	-	6.876	MINOR
ENSMUSG00000001555	Fkbp10	ENSMUST00000125616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001555	Fkbp10	ENSMUST00000139084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063549	Olfr322	ENSMUST00000213793	ENSMUSP00000150004	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000063549	Olfr322	ENSMUST00000213232	ENSMUSP00000150953	TRANSLATION	protein_coding	-	CCDS36165.1	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063549	Olfr322	ENSMUST00000217399	ENSMUSP00000149062	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000063549	Olfr322	ENSMUST00000072030	ENSMUSP00000071913	TRANSLATION	protein_coding	-	CCDS36165.1	-	327	0	0.36	1.5	162.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063549	Olfr322	ENSMUST00000214392	ENSMUSP00000150990	TRANSLATION	protein_coding	-	CCDS36165.1	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063549	Olfr322	ENSMUST00000214400	ENSMUSP00000150916	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000063549	Olfr322	ENSMUST00000216442	ENSMUSP00000150410	TRANSLATION	nonsense_mediated_decay	-	-	5	327	0	0.36	1.5	162.8	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000135089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000149465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000041042	ENSMUSP00000036861	TRANSLATION	protein_coding	-	-	1	534	0	4.62	0	179.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000180088	ENSMUSP00000136453	TRANSLATION	protein_coding	-	CCDS56756.1	1	500	0	4.62	0.5	179.7	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000151672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034412	Tbc1d10a	ENSMUST00000147485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041329	Atp1b2	ENSMUST00000047889	ENSMUSP00000047353	TRANSLATION	protein_coding	-	CCDS24898.1	1	290	3	5.88	8.8	370.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000041329	Atp1b2	ENSMUST00000130394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041329	Atp1b2	ENSMUST00000144425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041329	Atp1b2	ENSMUST00000153198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041329	Atp1b2	ENSMUST00000138694	ENSMUSP00000116290	TRANSLATION	protein_coding	start	-	2	136	0	2.6592	0	134.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044707	Ccnjl	ENSMUST00000152153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044707	Ccnjl	ENSMUST00000050574	ENSMUSP00000058111	TRANSLATION	protein_coding	-	CCDS24559.1	1	387	0	1.99	7.5	120.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000142	Axin2	ENSMUST00000140821	ENSMUSP00000120664	TRANSLATION	protein_coding	stop	-	2	98	0	1.35	0	88.9	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000000142	Axin2	ENSMUST00000144130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000142	Axin2	ENSMUST00000144511	ENSMUSP00000119915	TRANSLATION	protein_coding	stop	-	2	69	0	0.6	0	82.4	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000000142	Axin2	ENSMUST00000139682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000142	Axin2	ENSMUST00000052915	ENSMUSP00000051331	TRANSLATION	protein_coding	-	CCDS25575.1	1	840	0	4.8	0.5	317.5	0	-1,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000000142	Axin2	ENSMUST00000152909	ENSMUSP00000116956	TRANSLATION	protein_coding	stop	-	3	103	0	1.6	0	88.9	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000000142	Axin2	ENSMUST00000106711	ENSMUSP00000102322	TRANSLATION	protein_coding	-	-	5	775	0	4.8	0	317.5	0	-1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000020272	Stk10	ENSMUST00000143397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020272	Stk10	ENSMUST00000102821	ENSMUSP00000099885	TRANSLATION	protein_coding	-	CCDS24529.1	1	966	20	7	0.5	460.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000018509	Cenpv	ENSMUST00000123542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018509	Cenpv	ENSMUST00000018653	ENSMUSP00000018653	TRANSLATION	protein_coding	-	CCDS48818.1	1	252	7	2.1	0.5	0	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000018509	Cenpv	ENSMUST00000135497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018509	Cenpv	ENSMUST00000123181	ENSMUSP00000124585	TRANSLATION	nonsense_mediated_decay	start	-	3	96	2	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018509	Cenpv	ENSMUST00000138772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018509	Cenpv	ENSMUST00000156349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020481	Ankrd36	ENSMUST00000109855	ENSMUSP00000105481	TRANSLATION	protein_coding	-	-	1	300	0	4.15	0	89.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000020481	Ankrd36	ENSMUST00000118112	ENSMUSP00000122397	TRANSLATION	protein_coding	stop	-	5	1261	0	4.15	0	86.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020481	Ankrd36	ENSMUST00000146773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020481	Ankrd36	ENSMUST00000137933	ENSMUSP00000120499	TRANSLATION	protein_coding	start	-	1	498	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020481	Ankrd36	ENSMUST00000109856	ENSMUSP00000105482	TRANSLATION	protein_coding	-	CCDS36103.1	2	1415	0	4.15	0.5	89.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000014609	Chrne	ENSMUST00000135920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014609	Chrne	ENSMUST00000014753	ENSMUSP00000014753	TRANSLATION	protein_coding	-	-	5	494	0	10.6	0.5	403.4	3	4,-1	-	-	11.856	ALTERNATIVE:2
ENSMUSG00000014609	Chrne	ENSMUST00000134836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014609	Chrne	ENSMUST00000102556	ENSMUSP00000099616	TRANSLATION	protein_coding	-	CCDS24956.1	1	493	0	10.6	0.5	405.8	3	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000052298	Cdc42se2	ENSMUST00000123424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052298	Cdc42se2	ENSMUST00000135903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052298	Cdc42se2	ENSMUST00000153209	ENSMUSP00000120253	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	26	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052298	Cdc42se2	ENSMUST00000064104	ENSMUSP00000070725	TRANSLATION	protein_coding	-	CCDS36153.1	1	84	0	0	19.5	26	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000052298	Cdc42se2	ENSMUST00000136059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018470	Kcnab3	ENSMUST00000142328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018470	Kcnab3	ENSMUST00000134561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018470	Kcnab3	ENSMUST00000018614	ENSMUSP00000018614	TRANSLATION	protein_coding	-	CCDS24890.1	1	404	29	9.25	6.3	230.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000018599	Mief2	ENSMUST00000146159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018599	Mief2	ENSMUST00000154890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018599	Mief2	ENSMUST00000018743	ENSMUSP00000018743	TRANSLATION	protein_coding	-	CCDS24796.1	1	454	0	1	1.5	38.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020122	Egfr	ENSMUST00000020329	ENSMUSP00000020329	TRANSLATION	protein_coding	-	CCDS24443.1	1	1210	15	24.38	1.5	757.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020122	Egfr	ENSMUST00000139722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020122	Egfr	ENSMUST00000138518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020122	Egfr	ENSMUST00000125984	ENSMUSP00000122632	TRANSLATION	protein_coding	start	-	1	136	13	3.2	0	159.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020122	Egfr	ENSMUST00000102884	ENSMUSP00000099948	TRANSLATION	protein_coding	-	CCDS24444.1	1	655	13	15.33	0.5	462.3	0	2,-2	-	-	4.668	MINOR
ENSMUSG00000018925	Heatr9	ENSMUST00000019069	ENSMUSP00000019069	TRANSLATION	protein_coding	-	CCDS36253.1	5	569	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020681	Ace	ENSMUST00000132280	ENSMUSP00000119826	TRANSLATION	protein_coding	start	-	1	1016	18	20	0	1546.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020681	Ace	ENSMUST00000001963	ENSMUSP00000001963	TRANSLATION	protein_coding	-	CCDS25543.1	1	1312	18	24.33	0.5	1731.1	1	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020681	Ace	ENSMUST00000151657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020681	Ace	ENSMUST00000001964	ENSMUSP00000001964	TRANSLATION	protein_coding	-	CCDS25544.1	1	732	7	12	0.5	873.6	1	2,-2	-	-	0	MINOR
ENSMUSG00000048895	Cdk5r1	ENSMUST00000147694	ENSMUSP00000120964	TRANSLATION	protein_coding	stop	-	1	138	0	0	0	25.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048895	Cdk5r1	ENSMUST00000053413	ENSMUSP00000099514	TRANSLATION	protein_coding	-	CCDS25134.1	-	307	0	1.6	7.5	353.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042331	Specc1	ENSMUST00000202179	ENSMUSP00000144300	TRANSLATION	protein_coding	-	CCDS78966.1	1	978	0	3.3	1.7	75.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000042331	Specc1	ENSMUST00000136971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042331	Specc1	ENSMUST00000202905	ENSMUSP00000144311	TRANSLATION	protein_coding	-	-	5	1067	0	3.3	0	75.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000108709	ENSMUSP00000104349	TRANSLATION	protein_coding	-	-	5	1067	0	3.3	0	75.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000202389	ENSMUSP00000144055	TRANSLATION	protein_coding	-	-	5	1067	0	3.3	0	75.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000201671	ENSMUSP00000144030	TRANSLATION	protein_coding	-	-	5	790	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042331	Specc1	ENSMUST00000202744	ENSMUSP00000144483	TRANSLATION	protein_coding	-	-	3	121	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042331	Specc1	ENSMUST00000201866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042331	Specc1	ENSMUST00000049836	ENSMUSP00000063102	TRANSLATION	protein_coding	-	-	5	790	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042331	Specc1	ENSMUST00000201364	ENSMUSP00000143853	TRANSLATION	protein_coding	-	CCDS78965.1	5	1058	0	3.3	2.7	75.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000201624	ENSMUSP00000144659	TRANSLATION	protein_coding	-	-	5	790	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000042331	Specc1	ENSMUST00000092415	ENSMUSP00000090071	TRANSLATION	protein_coding	-	-	5	987	0	3.3	0	75.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000201723	ENSMUSP00000144542	TRANSLATION	protein_coding	-	-	5	710	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042331	Specc1	ENSMUST00000202869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042331	Specc1	ENSMUST00000200742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042331	Specc1	ENSMUST00000201015	ENSMUSP00000144174	TRANSLATION	protein_coding	-	-	5	407	0	3.3	1.2	75.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042331	Specc1	ENSMUST00000202178	ENSMUSP00000144161	TRANSLATION	protein_coding	-	CCDS78964.1	5	781	0	0	2.7	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000034566	Atp5h	ENSMUST00000137754	ENSMUSP00000121240	TRANSLATION	protein_coding	stop	-	3	138	0	4.25	0	189.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034566	Atp5h	ENSMUST00000073791	ENSMUSP00000086072	TRANSLATION	protein_coding	-	CCDS25633.1	5	161	0	5	10.8	219.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034566	Atp5h	ENSMUST00000137563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034566	Atp5h	ENSMUST00000180072	ENSMUSP00000137071	TRANSLATION	protein_coding	-	CCDS25633.1	2	161	0	5	10.8	219.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034566	Atp5h	ENSMUST00000138779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034566	Atp5h	ENSMUST00000141474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034566	Atp5h	ENSMUST00000106537	ENSMUSP00000102147	TRANSLATION	protein_coding	-	CCDS25633.1	5	161	0	5	10.8	219.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034566	Atp5h	ENSMUST00000043931	ENSMUSP00000046256	TRANSLATION	protein_coding	-	CCDS25633.1	1	161	0	5	10.8	219.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000051497	Kcnj16	ENSMUST00000150902	ENSMUSP00000121758	TRANSLATION	protein_coding	stop	-	3	66	0	0.6	0	25.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051497	Kcnj16	ENSMUST00000178798	ENSMUSP00000137414	TRANSLATION	protein_coding	-	CCDS25593.1	3	419	0	2.4	6.3	431	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051497	Kcnj16	ENSMUST00000106636	ENSMUSP00000102247	TRANSLATION	protein_coding	-	CCDS25593.1	1	419	0	2.4	6.3	431	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051497	Kcnj16	ENSMUST00000106635	ENSMUSP00000102246	TRANSLATION	protein_coding	-	CCDS25593.1	1	419	0	2.4	6.3	431	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000051497	Kcnj16	ENSMUST00000125692	ENSMUSP00000119921	TRANSLATION	protein_coding	stop	-	3	103	0	1.6	0	90.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051497	Kcnj16	ENSMUST00000180023	ENSMUSP00000136382	TRANSLATION	protein_coding	-	CCDS25593.1	3	419	0	2.4	6.3	431	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000015837	Sqstm1	ENSMUST00000015981	ENSMUSP00000015981	TRANSLATION	protein_coding	-	CCDS70176.1	1	404	9	3.93	1.5	210.7	0	-4,-7	-	-	15.804	MINOR
ENSMUSG00000015837	Sqstm1	ENSMUST00000102774	ENSMUSP00000099835	TRANSLATION	protein_coding	-	CCDS24629.1	1	442	9	4.128	2.7	240.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000015837	Sqstm1	ENSMUST00000154805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015837	Sqstm1	ENSMUST00000131214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015837	Sqstm1	ENSMUST00000147846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015837	Sqstm1	ENSMUST00000143379	ENSMUSP00000118662	TRANSLATION	protein_coding	-	-	5	382	9	2.6	0	90	0	-4,-7	-	-	8.946	MINOR
ENSMUSG00000015837	Sqstm1	ENSMUST00000136936	ENSMUSP00000120442	TRANSLATION	protein_coding	start	-	3	109	0	1.528	0	150.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046811	Gltpd2	ENSMUST00000057685	ENSMUSP00000049732	TRANSLATION	protein_coding	-	CCDS24952.1	1	321	0	1.4	0.5	112.8	0	-3,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000046811	Gltpd2	ENSMUST00000179000	ENSMUSP00000136029	TRANSLATION	protein_coding	-	-	2	207	0	1.4	0	112.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000042298	Ttc19	ENSMUST00000162385	ENSMUSP00000125618	TRANSLATION	protein_coding	start	-	5	202	0	0.8	0	48.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042298	Ttc19	ENSMUST00000101075	ENSMUSP00000098636	TRANSLATION	protein_coding	-	CCDS48817.1	1	352	0	1.2	1.5	68.4	0	-3,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000042298	Ttc19	ENSMUST00000050646	ENSMUSP00000054367	TRANSLATION	protein_coding	-	CCDS36177.1	1	365	0	1.2	1.5	68.4	0	-3,0	-	-	12	PRINCIPAL:3
ENSMUSG00000042298	Ttc19	ENSMUST00000136477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042298	Ttc19	ENSMUST00000154976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020798	Spns3	ENSMUST00000155774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020798	Spns3	ENSMUST00000092940	ENSMUSP00000090617	TRANSLATION	protein_coding	-	CCDS24987.1	1	514	0	0	2.7	116.6	14	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020798	Spns3	ENSMUST00000021154	ENSMUSP00000021154	TRANSLATION	protein_coding	-	-	1	492	0	0	1	94.4	14	-4,-6	-	-	4.668	MINOR
ENSMUSG00000064044	Olfr319	ENSMUST00000076965	ENSMUSP00000076232	TRANSLATION	protein_coding	-	CCDS24740.1	-	306	0	0.42	1.5	156.2	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000064044	Olfr319	ENSMUST00000215962	ENSMUSP00000150883	TRANSLATION	protein_coding	-	CCDS24740.1	5	306	0	0.42	1.5	156.2	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000064044	Olfr319	ENSMUST00000215238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018858	Mrpl58	ENSMUST00000103036	ENSMUSP00000099325	TRANSLATION	protein_coding	-	CCDS25632.1	1	177	0	4.5	1.7	68.4	0	0,3	-	-	10.764	MINOR
ENSMUSG00000018858	Mrpl58	ENSMUST00000134386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018858	Mrpl58	ENSMUST00000106539	ENSMUSP00000102149	TRANSLATION	protein_coding	-	-	1	186	0	4.75	0	23.7	0	0,3	-	-	7.074	MINOR
ENSMUSG00000018858	Mrpl58	ENSMUST00000021079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018858	Mrpl58	ENSMUST00000122946	ENSMUSP00000116245	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	1.75	0	0	0	0,3	-	-	-1	MINOR
ENSMUSG00000018858	Mrpl58	ENSMUST00000135619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018858	Mrpl58	ENSMUST00000133192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018858	Mrpl58	ENSMUST00000128632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018858	Mrpl58	ENSMUST00000155134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018858	Mrpl58	ENSMUST00000153983	ENSMUSP00000116746	TRANSLATION	protein_coding	-	CCDS83928.1	1	206	0	5.25	6.3	68.4	0	0,3	-	-	14	PRINCIPAL:1
ENSMUSG00000054519	Zfp867	ENSMUST00000057799	ENSMUSP00000050746	TRANSLATION	protein_coding	-	CCDS24769.1	1	473	43	1.9	0.5	288.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025571	Tnrc6c	ENSMUST00000026658	ENSMUSP00000026658	TRANSLATION	protein_coding	-	CCDS36381.1	5	1900	0	4.3	0.5	707.5	0	-4,-5	-	-	11.91	PRINCIPAL:1
ENSMUSG00000025571	Tnrc6c	ENSMUST00000106344	ENSMUSP00000101951	TRANSLATION	protein_coding	-	CCDS36381.1	5	1900	0	4.3	0.5	707.5	0	-4,-5	-	-	11.91	PRINCIPAL:1
ENSMUSG00000025571	Tnrc6c	ENSMUST00000141115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025571	Tnrc6c	ENSMUST00000141287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025571	Tnrc6c	ENSMUST00000140347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025571	Tnrc6c	ENSMUST00000138299	ENSMUSP00000115221	TRANSLATION	protein_coding	start	-	1	1732	0	4.3	0	709	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000106244	ENSMUSP00000101851	TRANSLATION	protein_coding	-	CCDS48999.1	1	338	0	7.82	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039850	Endov	ENSMUST00000132015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039850	Endov	ENSMUST00000064513	ENSMUSP00000068849	TRANSLATION	protein_coding	-	-	5	200	0	5.33	0	0	0	-4,-7	-	-	1.02	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000153204	ENSMUSP00000128455	TRANSLATION	nonsense_mediated_decay	-	-	5	88	3	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000140323	ENSMUSP00000118226	TRANSLATION	protein_coding	start/stop	-	5	271	0	5.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000129327	ENSMUSP00000119599	TRANSLATION	protein_coding	-	CCDS25718.1	5	255	0	5.33	0.5	0	0	-4,-7	-	-	1.02	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000143817	ENSMUSP00000131108	TRANSLATION	nonsense_mediated_decay	-	-	5	152	3	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000143670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039850	Endov	ENSMUST00000134873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039850	Endov	ENSMUST00000154370	ENSMUSP00000132873	TRANSLATION	nonsense_mediated_decay	-	-	3	88	3	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039850	Endov	ENSMUST00000106245	ENSMUSP00000132755	TRANSLATION	protein_coding	-	CCDS25718.1	1	255	0	5.33	0.5	0	0	-4,-7	-	-	1.02	MINOR
ENSMUSG00000042988	Notum	ENSMUST00000106178	ENSMUSP00000101784	TRANSLATION	protein_coding	-	CCDS49007.1	1	503	0	9.58	1.5	300.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042988	Notum	ENSMUST00000150458	ENSMUSP00000122788	TRANSLATION	protein_coding	stop	-	3	215	0	4.33	0	137.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000042988	Notum	ENSMUST00000055439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042988	Notum	ENSMUST00000106177	ENSMUSP00000101783	TRANSLATION	protein_coding	-	CCDS49007.1	5	503	0	9.58	1.5	300.5	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020427	Igfbp3	ENSMUST00000020702	ENSMUSP00000020702	TRANSLATION	protein_coding	-	CCDS24428.1	1	292	0	2.6	5.1	106.9	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000020427	Igfbp3	ENSMUST00000135887	ENSMUSP00000131670	TRANSLATION	protein_coding	-	CCDS24428.1	1	292	0	2.6	5.1	106.9	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000020787	P2rx1	ENSMUST00000021141	ENSMUSP00000021141	TRANSLATION	protein_coding	-	CCDS24992.1	1	399	0	9.13	7.5	516.3	2	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020787	P2rx1	ENSMUST00000092938	ENSMUSP00000090614	TRANSLATION	protein_coding	-	-	5	372	0	8.38	2.2	237.4	2	-4,-6	-	-	5.055	MINOR
ENSMUSG00000020787	P2rx1	ENSMUST00000148964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009350	Mpo	ENSMUST00000146650	ENSMUSP00000128484	TRANSLATION	protein_coding	start	-	2	138	0	2	0	110.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009350	Mpo	ENSMUST00000107930	ENSMUSP00000103563	TRANSLATION	nonsense_mediated_decay	start	-	2	99	0	2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000009350	Mpo	ENSMUST00000143021	ENSMUSP00000123371	TRANSLATION	protein_coding	stop	-	5	166	0	3.48	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000009350	Mpo	ENSMUST00000020779	ENSMUSP00000020779	TRANSLATION	protein_coding	-	CCDS25217.1	1	718	25	11.89	0.5	604.4	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000009350	Mpo	ENSMUST00000121303	ENSMUSP00000112837	TRANSLATION	protein_coding	-	CCDS25217.1	1	718	25	11.89	0.5	604.4	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000009350	Mpo	ENSMUST00000167903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020525	Ppm1d	ENSMUST00000127717	ENSMUSP00000115606	TRANSLATION	protein_coding	stop	-	3	169	6	1.48	0	176.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020525	Ppm1d	ENSMUST00000020835	ENSMUSP00000020835	TRANSLATION	protein_coding	-	CCDS25194.1	1	598	13	2.28	1.5	291.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034177	Rnf43	ENSMUST00000121782	ENSMUSP00000112748	TRANSLATION	protein_coding	-	-	5	743	8	3.95	0	44.4	1	1,-3	-	-	16.002	MINOR
ENSMUSG00000034177	Rnf43	ENSMUST00000092800	ENSMUSP00000090476	TRANSLATION	protein_coding	-	CCDS25215.2	5	784	8	4.95	0.5	44.4	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000034177	Rnf43	ENSMUST00000124625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034177	Rnf43	ENSMUST00000150866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034177	Rnf43	ENSMUST00000040089	ENSMUSP00000044241	TRANSLATION	protein_coding	-	-	1	657	8	2.95	0.5	44.4	1	-4,-5	-	-	13.998	MINOR
ENSMUSG00000034177	Rnf43	ENSMUST00000134684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034177	Rnf43	ENSMUST00000162740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034177	Rnf43	ENSMUST00000165679	ENSMUSP00000130685	TRANSLATION	protein_coding	-	CCDS25215.2	5	784	8	4.95	0.5	44.4	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000034177	Rnf43	ENSMUST00000123658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020785	Camkk1	ENSMUST00000145834	ENSMUSP00000123441	TRANSLATION	protein_coding	start	-	5	342	17	7.81	0	201.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020785	Camkk1	ENSMUST00000155720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020785	Camkk1	ENSMUST00000092937	ENSMUSP00000090613	TRANSLATION	protein_coding	-	CCDS24993.1	1	505	17	8.21	7.5	207	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020392	Cdkn2aipnl	ENSMUST00000102763	ENSMUSP00000099824	TRANSLATION	protein_coding	-	CCDS24663.1	1	116	0	0.98	7.5	103.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020392	Cdkn2aipnl	ENSMUST00000127136	ENSMUSP00000120062	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0.3	0	30.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000035441	Myo1d	ENSMUST00000041065	ENSMUSP00000037819	TRANSLATION	protein_coding	-	CCDS36242.1	5	1006	15	15.675	12.8	973.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000035441	Myo1d	ENSMUST00000070997	ENSMUSP00000066948	TRANSLATION	protein_coding	-	-	1	944	15	15.195	0.5	900.9	0	-4,-5	-	-	12.696	MINOR
ENSMUSG00000035441	Myo1d	ENSMUST00000125944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020484	Xbp1	ENSMUST00000239150	ENSMUSP00000158915	TRANSLATION	protein_coding	-	-	-	371	0	1	0.5	82.1	0	-2,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000020484	Xbp1	ENSMUST00000145588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020484	Xbp1	ENSMUST00000149159	ENSMUSP00000134088	TRANSLATION	protein_coding	start	-	2	127	0	1	0	39	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020484	Xbp1	ENSMUST00000149623	ENSMUSP00000135768	TRANSLATION	protein_coding	-	-	2	214	0	1	0	78.4	0	-4,-5	-	-	11.73	ALTERNATIVE:2
ENSMUSG00000020484	Xbp1	ENSMUST00000063084	ENSMUSP00000054852	TRANSLATION	protein_coding	-	CCDS24400.1	1	267	0	1	0.5	82.1	0	-2,0	-	-	12	PRINCIPAL:2
ENSMUSG00000034793	G6pc3	ENSMUST00000078975	ENSMUSP00000077995	TRANSLATION	protein_coding	-	CCDS25491.1	1	346	6	0	8.8	71.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034793	G6pc3	ENSMUST00000070334	ENSMUSP00000064276	TRANSLATION	protein_coding	-	CCDS25491.1	1	346	6	0	8.8	71.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034793	G6pc3	ENSMUST00000139995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034793	G6pc3	ENSMUST00000131382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034793	G6pc3	ENSMUST00000124594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034793	G6pc3	ENSMUST00000145490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034793	G6pc3	ENSMUST00000153178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039703	Nploc4	ENSMUST00000132519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039703	Nploc4	ENSMUST00000137041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039703	Nploc4	ENSMUST00000044271	ENSMUSP00000035851	TRANSLATION	protein_coding	-	CCDS56827.1	1	608	4	2.15	11.6	744.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039703	Nploc4	ENSMUST00000103017	ENSMUSP00000099306	TRANSLATION	protein_coding	-	CCDS25732.1	1	576	4	2.15	0.5	632.4	0	-4,-5	-	-	10	MINOR
ENSMUSG00000039703	Nploc4	ENSMUST00000136095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001506	Col1a1	ENSMUST00000139974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001506	Col1a1	ENSMUST00000001547	ENSMUSP00000001547	TRANSLATION	protein_coding	-	CCDS25265.1	1	1453	5	33.75	1.5	666.2	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000001506	Col1a1	ENSMUST00000148593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001506	Col1a1	ENSMUST00000148046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069588	Gm11733	ENSMUST00000092394	ENSMUSP00000090049	TRANSLATION	protein_coding	-	-	2	125	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000046879	Irgm1	ENSMUST00000049519	ENSMUSP00000050446	TRANSLATION	protein_coding	-	CCDS24588.1	1	409	15	0.706	1.5	551.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000046879	Irgm1	ENSMUST00000097271	ENSMUSP00000094870	TRANSLATION	protein_coding	-	-	1	393	15	0.64	0.5	551.5	0	-4,-7	-	-	17.442	ALTERNATIVE:2
ENSMUSG00000046879	Irgm1	ENSMUST00000147151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072640	Lyrm9	ENSMUST00000147875	ENSMUSP00000127853	TRANSLATION	protein_coding	-	CCDS36240.1	1	78	0	0	17.5	51.3	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000072640	Lyrm9	ENSMUST00000100748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072640	Lyrm9	ENSMUST00000141321	ENSMUSP00000131608	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	51.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005952	Trpv1	ENSMUST00000138853	ENSMUSP00000116400	TRANSLATION	protein_coding	stop	-	5	474	0	9.2	0	56.3	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000005952	Trpv1	ENSMUST00000128113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005952	Trpv1	ENSMUST00000102526	ENSMUSP00000099585	TRANSLATION	protein_coding	-	CCDS25003.1	1	839	7	14	1.5	87.7	6	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005952	Trpv1	ENSMUST00000108470	ENSMUSP00000104110	TRANSLATION	protein_coding	-	-	5	471	0	9	0	56.3	6	-4,-6	-	-	3.852	MINOR
ENSMUSG00000005952	Trpv1	ENSMUST00000006106	ENSMUSP00000006106	TRANSLATION	protein_coding	-	-	5	779	7	13	0	87.7	6	-4,-5	-	-	16.002	MINOR
ENSMUSG00000044788	Fads6	ENSMUST00000056153	ENSMUSP00000058783	TRANSLATION	protein_coding	-	CCDS25626.1	1	342	0	0	2.7	46.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044788	Fads6	ENSMUST00000141006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040158	Tax1bp3	ENSMUST00000108477	ENSMUSP00000104117	TRANSLATION	protein_coding	-	-	5	98	0	2.5	3.4	0	0	-4,-6	-	-	5.06	MINOR
ENSMUSG00000040158	Tax1bp3	ENSMUST00000133922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040158	Tax1bp3	ENSMUST00000150407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040158	Tax1bp3	ENSMUST00000040687	ENSMUSP00000047410	TRANSLATION	protein_coding	-	CCDS25000.1	1	124	0	3.25	18.2	71.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000001751	Naglu	ENSMUST00000140735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001751	Naglu	ENSMUST00000138409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001751	Naglu	ENSMUST00000001802	ENSMUSP00000001802	TRANSLATION	protein_coding	-	CCDS25444.1	1	739	5	5.75	1.5	830.4	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000053580	Tanc2	ENSMUST00000124367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053580	Tanc2	ENSMUST00000100330	ENSMUSP00000097904	TRANSLATION	protein_coding	-	CCDS36357.1	5	1994	17	6.3	3.9	187.6	0	-4,-2	-	-	18.73	PRINCIPAL:1
ENSMUSG00000053580	Tanc2	ENSMUST00000089485	ENSMUSP00000086912	TRANSLATION	protein_coding	start	-	1	370	0	4.98	0	139.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053580	Tanc2	ENSMUST00000167695	ENSMUSP00000126201	TRANSLATION	protein_coding	start	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053580	Tanc2	ENSMUST00000207807	ENSMUSP00000147168	TRANSLATION	protein_coding	start/stop	-	5	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053580	Tanc2	ENSMUST00000168598	ENSMUSP00000129877	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053580	Tanc2	ENSMUST00000146162	ENSMUSP00000123674	TRANSLATION	protein_coding	start	-	5	1137	0	6.246	0	192.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053580	Tanc2	ENSMUST00000147975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063193	Cd300lb	ENSMUST00000126655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063193	Cd300lb	ENSMUST00000149663	ENSMUSP00000144728	TRANSLATION	protein_coding	-	CCDS83924.1	1	119	0	1.64	0.5	0	3	-4,-5	-	-	3.726	MINOR
ENSMUSG00000063193	Cd300lb	ENSMUST00000106581	ENSMUSP00000102191	TRANSLATION	protein_coding	-	CCDS25614.1	1	255	0	2.64	0.5	56.7	3	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000063193	Cd300lb	ENSMUST00000239005	ENSMUSP00000159146	TRANSLATION	protein_coding	-	-	-	209	0	2.64	1	56.7	3	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000049807	Arhgap23	ENSMUST00000152933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049807	Arhgap23	ENSMUST00000142465	ENSMUSP00000123191	TRANSLATION	nonsense_mediated_decay	-	-	5	634	5	6.89	0	228.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049807	Arhgap23	ENSMUST00000107601	ENSMUSP00000103227	TRANSLATION	protein_coding	-	CCDS36293.1	5	1277	5	6.89	0.5	228.5	0	-4,-6	-	-	8.54	MINOR
ENSMUSG00000049807	Arhgap23	ENSMUST00000093940	ENSMUSP00000091472	TRANSLATION	protein_coding	-	-	1	325	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000049807	Arhgap23	ENSMUST00000121799	ENSMUSP00000112999	TRANSLATION	protein_coding	-	-	5	1488	5	10.44	0.5	269.5	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000020321	Mdh1	ENSMUST00000125302	ENSMUSP00000119816	TRANSLATION	protein_coding	stop	-	3	155	20	4	0	139.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020321	Mdh1	ENSMUST00000144978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020321	Mdh1	ENSMUST00000238916	ENSMUSP00000159049	TRANSLATION	protein_coding	-	-	-	355	26	8.33	2.7	296.4	0	-4,-7	-	-	18.424	MINOR
ENSMUSG00000020321	Mdh1	ENSMUST00000102874	ENSMUSP00000099938	TRANSLATION	protein_coding	-	CCDS24466.1	1	334	26	8.33	17	296.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000020321	Mdh1	ENSMUST00000239073	ENSMUSP00000159017	TRANSLATION	protein_coding	-	CCDS24466.1	-	334	26	8.33	17	296.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000020321	Mdh1	ENSMUST00000146146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020326	Ccng1	ENSMUST00000151359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020326	Ccng1	ENSMUST00000020576	ENSMUSP00000020576	TRANSLATION	protein_coding	-	CCDS24550.1	1	294	0	1.8	9.6	68.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062186	Olfr395	ENSMUST00000215690	ENSMUSP00000149064	TRANSLATION	protein_coding	-	CCDS25020.1	5	312	0	0.36	2.7	188.3	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062186	Olfr395	ENSMUST00000072991	ENSMUSP00000072756	TRANSLATION	protein_coding	-	CCDS25020.1	-	312	0	0.36	2.7	188.3	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059864	Olfr1393	ENSMUST00000213323	ENSMUSP00000149358	TRANSLATION	protein_coding	-	CCDS24603.1	5	311	0	0.32	5.1	164.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059864	Olfr1393	ENSMUST00000078932	ENSMUSP00000077962	TRANSLATION	protein_coding	-	CCDS24603.1	-	311	0	0.32	5.1	164.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059864	Olfr1393	ENSMUST00000217626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040489	Sox30	ENSMUST00000049038	ENSMUSP00000037519	TRANSLATION	protein_coding	-	CCDS24570.1	1	782	0	1	0.5	80.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033196	Myh2	ENSMUST00000124337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033196	Myh2	ENSMUST00000170159	ENSMUSP00000129544	TRANSLATION	protein_coding	-	CCDS24854.2	5	1942	15	36.63	10.4	1544.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033196	Myh2	ENSMUST00000018641	ENSMUSP00000018641	TRANSLATION	protein_coding	-	CCDS24854.2	5	1942	15	36.63	10.4	1544.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000069844	Sco1	ENSMUST00000137779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069844	Sco1	ENSMUST00000136984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069844	Sco1	ENSMUST00000108690	ENSMUSP00000104330	TRANSLATION	protein_coding	-	-	1	289	7	4	0	28.5	1	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000069844	Sco1	ENSMUST00000092996	ENSMUSP00000090673	TRANSLATION	protein_coding	-	CCDS36183.1	1	284	7	4	1.5	28.5	1	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000062312	Erbb2	ENSMUST00000058295	ENSMUSP00000053897	TRANSLATION	protein_coding	-	CCDS25349.1	1	1256	2	22.5	1.5	692	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000062312	Erbb2	ENSMUST00000136032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062312	Erbb2	ENSMUST00000138066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062115	Rai1	ENSMUST00000102688	ENSMUSP00000099749	TRANSLATION	protein_coding	-	CCDS24784.1	5	1889	8	1.2	0.5	37.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062115	Rai1	ENSMUST00000156902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062115	Rai1	ENSMUST00000149770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062115	Rai1	ENSMUST00000090806	ENSMUSP00000088315	TRANSLATION	protein_coding	-	-	1	1840	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000062115	Rai1	ENSMUST00000171108	ENSMUSP00000126183	TRANSLATION	protein_coding	-	CCDS24784.1	1	1889	8	1.2	0.5	37.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062115	Rai1	ENSMUST00000132012	ENSMUSP00000118543	TRANSLATION	protein_coding	stop	-	2	106	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062115	Rai1	ENSMUST00000064190	ENSMUSP00000070896	TRANSLATION	protein_coding	-	CCDS24784.1	1	1889	8	1.2	0.5	37.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000044061	Olfr225	ENSMUST00000055276	ENSMUSP00000051482	TRANSLATION	protein_coding	-	-	-	419	0	0.36	0.5	158.1	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044061	Olfr225	ENSMUST00000213169	ENSMUSP00000149203	TRANSLATION	polymorphic_pseudogene	stop	-	5	316	0	0.36	1.2	158.1	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000108167	Olfr1386	ENSMUST00000204518	ENSMUSP00000145320	TRANSLATION	protein_coding	-	CCDS24611.1	3	309	0	0.32	3.9	167.6	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000108167	Olfr1386	ENSMUST00000071905	ENSMUSP00000071801	TRANSLATION	protein_coding	-	CCDS24611.1	-	309	0	0.32	3.9	167.6	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000108167	Olfr1386	ENSMUST00000213674	ENSMUSP00000150448	TRANSLATION	protein_coding	-	CCDS24611.1	5	309	0	0.32	3.9	167.6	6	-3,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000038437	Mllt6	ENSMUST00000044730	ENSMUSP00000045445	TRANSLATION	protein_coding	-	CCDS25323.1	1	1079	12	5.25	0.5	151.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038437	Mllt6	ENSMUST00000155835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038437	Mllt6	ENSMUST00000107586	ENSMUSP00000103212	TRANSLATION	protein_coding	-	-	5	1109	12	5.25	0.5	151.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000038437	Mllt6	ENSMUST00000134158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038437	Mllt6	ENSMUST00000151729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038437	Mllt6	ENSMUST00000143220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039321	Uts2r	ENSMUST00000039044	ENSMUSP00000046920	TRANSLATION	protein_coding	-	CCDS25769.1	-	385	0	0.48	1.5	144.9	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000005043	Sgsh	ENSMUST00000005173	ENSMUSP00000005173	TRANSLATION	protein_coding	-	CCDS36384.1	1	502	5	10.75	4.1	197.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005043	Sgsh	ENSMUST00000136523	ENSMUSP00000115587	TRANSLATION	nonsense_mediated_decay	-	-	5	117	0	1	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000005043	Sgsh	ENSMUST00000126132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005043	Sgsh	ENSMUST00000100172	ENSMUSP00000097748	TRANSLATION	protein_coding	-	-	1	422	3	7.15	0	116	0	2,-2	-	-	4.122	MINOR
ENSMUSG00000005043	Sgsh	ENSMUST00000141540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005043	Sgsh	ENSMUST00000133507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060600	Eno3	ENSMUST00000072841	ENSMUSP00000072620	TRANSLATION	protein_coding	-	CCDS24961.1	1	434	14	11.66	19.3	713.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060600	Eno3	ENSMUST00000157027	ENSMUSP00000115726	TRANSLATION	protein_coding	stop	-	2	196	5	5.49	0	294.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060600	Eno3	ENSMUST00000108548	ENSMUSP00000104188	TRANSLATION	protein_coding	-	CCDS24961.1	5	434	14	11.66	19.3	713.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060600	Eno3	ENSMUST00000134087	ENSMUSP00000121640	TRANSLATION	protein_coding	stop	-	5	80	3	2.41	0	112.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060600	Eno3	ENSMUST00000179738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060600	Eno3	ENSMUST00000126241	ENSMUSP00000123688	TRANSLATION	protein_coding	stop	-	2	70	3	2.08	0	104.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060600	Eno3	ENSMUST00000170716	ENSMUSP00000128714	TRANSLATION	protein_coding	-	CCDS24961.1	1	434	14	11.66	19.3	713.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060600	Eno3	ENSMUST00000179055	ENSMUSP00000137559	TRANSLATION	protein_coding	start/stop	-	3	190	9	4.75	0	326.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040938	Slc16a11	ENSMUST00000123716	ENSMUSP00000114871	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0	0	0	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000040938	Slc16a11	ENSMUST00000149880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040938	Slc16a11	ENSMUST00000144494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040938	Slc16a11	ENSMUST00000122852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040938	Slc16a11	ENSMUST00000094055	ENSMUSP00000091597	TRANSLATION	protein_coding	-	-	1	447	0	0	3.9	81.1	19	-3,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000040938	Slc16a11	ENSMUST00000126388	ENSMUSP00000116648	TRANSLATION	protein_coding	-	-	5	447	0	0	3.9	81.1	19	-3,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000040938	Slc16a11	ENSMUST00000131468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040938	Slc16a11	ENSMUST00000153993	ENSMUSP00000122586	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000040938	Slc16a11	ENSMUST00000126296	ENSMUSP00000118381	TRANSLATION	protein_coding	stop	-	5	198	0	0	0	67.9	12	-3,-5	-	-	-1	MINOR
ENSMUSG00000040938	Slc16a11	ENSMUST00000171032	ENSMUSP00000128419	TRANSLATION	protein_coding	-	-	5	447	0	0	3.9	81.1	19	-3,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000040938	Slc16a11	ENSMUST00000136328	ENSMUSP00000115212	TRANSLATION	protein_coding	-	-	5	399	0	0	0	35.7	16	-3,-6	-	-	2.64	MINOR
ENSMUSG00000047904	Sstr2	ENSMUST00000146390	ENSMUSP00000138101	TRANSLATION	protein_coding	-	CCDS59571.1	5	369	0	1.22	7.5	214.3	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047904	Sstr2	ENSMUST00000106630	ENSMUSP00000102241	TRANSLATION	protein_coding	-	CCDS25598.1	1	346	0	1.2	0.5	214.3	7	-4,-5	-	-	11.904	MINOR
ENSMUSG00000047904	Sstr2	ENSMUST00000067591	ENSMUSP00000068578	TRANSLATION	protein_coding	-	CCDS25598.1	2	346	0	1.2	0.5	214.3	7	-4,-5	-	-	11.904	MINOR
ENSMUSG00000058275	Olfr412	ENSMUST00000216362	ENSMUSP00000149922	TRANSLATION	protein_coding	-	CCDS25031.1	5	312	0	0.42	3.9	173.7	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000058275	Olfr412	ENSMUST00000077794	ENSMUSP00000076967	TRANSLATION	protein_coding	-	CCDS25031.1	-	312	0	0.42	3.9	173.7	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020823	Sec14l1	ENSMUST00000127090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020823	Sec14l1	ENSMUST00000103026	ENSMUSP00000099315	TRANSLATION	protein_coding	-	CCDS48988.1	5	716	0	6.67	1.7	340.5	0	-4,-7	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000020823	Sec14l1	ENSMUST00000090433	ENSMUSP00000087916	TRANSLATION	protein_coding	-	CCDS48989.1	1	715	0	6.67	1.7	340.5	0	-4,-7	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000020823	Sec14l1	ENSMUST00000021177	ENSMUSP00000021177	TRANSLATION	protein_coding	-	CCDS25683.1	1	719	0	6.67	3.9	340.5	0	-4,-7	-	-	13	PRINCIPAL:3
ENSMUSG00000020823	Sec14l1	ENSMUST00000153437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020823	Sec14l1	ENSMUST00000146585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001095	Slc13a2	ENSMUST00000001122	ENSMUSP00000001122	TRANSLATION	protein_coding	-	CCDS25103.1	1	586	0	2.48	1.5	527.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000005951	Shpk	ENSMUST00000131927	ENSMUSP00000123639	TRANSLATION	nonsense_mediated_decay	-	-	1	138	4	1.16	0	44.7	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000005951	Shpk	ENSMUST00000006105	ENSMUSP00000006105	TRANSLATION	protein_coding	-	CCDS25002.1	1	476	16	3.14	2.7	80.5	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036264	Fstl4	ENSMUST00000036796	ENSMUSP00000042007	TRANSLATION	protein_coding	-	CCDS24673.1	1	841	0	4.544	1.5	120.7	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000069763	Tmem100	ENSMUST00000092788	ENSMUSP00000090464	TRANSLATION	protein_coding	-	CCDS25239.1	1	134	0	0	5.1	201.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000048852	Gm12185	ENSMUST00000094476	ENSMUSP00000092049	TRANSLATION	protein_coding	-	CCDS36142.1	5	835	27	1	0.5	903.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048852	Gm12185	ENSMUST00000129318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048852	Gm12185	ENSMUST00000059930	ENSMUSP00000054351	TRANSLATION	protein_coding	-	CCDS36142.1	1	835	27	1	0.5	903.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039741	Bahcc1	ENSMUST00000142439	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039741	Bahcc1	ENSMUST00000143667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039741	Bahcc1	ENSMUST00000118987	ENSMUSP00000112784	TRANSLATION	protein_coding	-	CCDS83943.1	1	2643	0	0.6	0.5	54	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039741	Bahcc1	ENSMUST00000044985	ENSMUSP00000043643	TRANSLATION	protein_coding	-	CCDS49003.1	5	2643	0	0.6	0.5	54	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039741	Bahcc1	ENSMUST00000122148	ENSMUSP00000112827	TRANSLATION	protein_coding	-	CCDS83943.1	1	2643	0	0.6	0.5	54	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000018761	Mpdu1	ENSMUST00000127118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018761	Mpdu1	ENSMUST00000125389	ENSMUSP00000129025	TRANSLATION	nonsense_mediated_decay	start	-	2	129	0	0	0	49.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000018761	Mpdu1	ENSMUST00000155200	ENSMUSP00000117715	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	49.7	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000018761	Mpdu1	ENSMUST00000137288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018761	Mpdu1	ENSMUST00000153217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018761	Mpdu1	ENSMUST00000018905	ENSMUSP00000018905	TRANSLATION	protein_coding	-	CCDS24903.1	1	247	0	0	7.6	75.8	8	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000018761	Mpdu1	ENSMUST00000139155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018761	Mpdu1	ENSMUST00000149764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018761	Mpdu1	ENSMUST00000129224	ENSMUSP00000120001	TRANSLATION	protein_coding	start	-	3	197	0	0	0.5	49.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000018761	Mpdu1	ENSMUST00000148242	ENSMUSP00000133074	TRANSLATION	nonsense_mediated_decay	-	-	1	120	0	0	0	49.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000092157	Gm17268	ENSMUST00000171515	ENSMUSP00000131017	TRANSLATION	protein_coding	start/stop	-	5	22	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000045667	Smtnl2	ENSMUST00000108500	ENSMUSP00000104140	TRANSLATION	protein_coding	-	-	1	422	0	2.8	0	78.8	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000045667	Smtnl2	ENSMUST00000143345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045667	Smtnl2	ENSMUST00000050226	ENSMUSP00000059043	TRANSLATION	protein_coding	-	CCDS24985.1	1	456	0	2.8	1.5	78.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000045667	Smtnl2	ENSMUST00000125807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020134	Peli1	ENSMUST00000149675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020134	Peli1	ENSMUST00000156122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020134	Peli1	ENSMUST00000093290	ENSMUSP00000090979	TRANSLATION	protein_coding	-	CCDS24462.1	1	418	6	5.35	17	742.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020134	Peli1	ENSMUST00000101477	ENSMUSP00000099018	TRANSLATION	protein_coding	-	CCDS24462.1	1	418	6	5.35	17	742.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020335	Zfp354b	ENSMUST00000109124	ENSMUSP00000104752	TRANSLATION	protein_coding	-	CCDS24641.1	1	601	52	1.6	0.5	374.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020335	Zfp354b	ENSMUST00000164280	ENSMUSP00000127671	TRANSLATION	protein_coding	-	CCDS24641.1	1	601	52	1.6	0.5	374.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020335	Zfp354b	ENSMUST00000152296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050270	Tmem220	ENSMUST00000061786	ENSMUSP00000057366	TRANSLATION	protein_coding	-	CCDS70209.1	1	167	0	0	2.7	101.7	3	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000050270	Tmem220	ENSMUST00000079077	ENSMUSP00000078084	TRANSLATION	protein_coding	-	CCDS24850.1	1	191	0	0	0.5	85.8	3	0,-3	-	-	5.046	MINOR
ENSMUSG00000020372	Rack1	ENSMUST00000136703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020372	Rack1	ENSMUST00000020640	ENSMUSP00000020640	TRANSLATION	protein_coding	-	CCDS24585.1	1	317	0	7.75	18.3	179.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020372	Rack1	ENSMUST00000125166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020372	Rack1	ENSMUST00000136849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020372	Rack1	ENSMUST00000142269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020372	Rack1	ENSMUST00000139959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020287	Mpg	ENSMUST00000142964	ENSMUSP00000118208	TRANSLATION	nonsense_mediated_decay	-	-	1	146	0	0.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020287	Mpg	ENSMUST00000144903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020287	Mpg	ENSMUST00000020528	ENSMUSP00000020528	TRANSLATION	protein_coding	-	CCDS24520.1	1	333	0	2.8	0.5	203.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020287	Mpg	ENSMUST00000138050	ENSMUSP00000121960	TRANSLATION	nonsense_mediated_decay	-	-	1	146	0	0.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020475	Pgam2	ENSMUST00000020768	ENSMUSP00000020768	TRANSLATION	protein_coding	-	CCDS24404.1	1	253	14	3	15.5	0	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020840	Blmh	ENSMUST00000155867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020840	Blmh	ENSMUST00000140781	ENSMUSP00000132608	TRANSLATION	protein_coding	stop	-	5	57	0	1.75	0	79.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020840	Blmh	ENSMUST00000145732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020840	Blmh	ENSMUST00000155053	ENSMUSP00000128505	TRANSLATION	protein_coding	stop	-	5	129	0	4.08	0	197.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020840	Blmh	ENSMUST00000168124	ENSMUSP00000130370	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	1	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020840	Blmh	ENSMUST00000125145	ENSMUSP00000132739	TRANSLATION	protein_coding	stop	-	3	179	0	4.33	0	269.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020840	Blmh	ENSMUST00000140193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020840	Blmh	ENSMUST00000146197	ENSMUSP00000118243	TRANSLATION	protein_coding	stop	-	3	209	1	3.91	0	232.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020840	Blmh	ENSMUST00000021197	ENSMUSP00000021197	TRANSLATION	protein_coding	-	CCDS25073.1	1	455	2	10.91	8.5	691.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000032633	Flcn	ENSMUST00000047706	ENSMUSP00000037675	TRANSLATION	protein_coding	stop	-	2	82	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032633	Flcn	ENSMUST00000091246	ENSMUSP00000091696	TRANSLATION	protein_coding	-	CCDS24777.1	1	579	0	5.4	5.1	479.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032633	Flcn	ENSMUST00000133647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032633	Flcn	ENSMUST00000102697	ENSMUSP00000099758	TRANSLATION	protein_coding	-	CCDS24777.1	1	579	0	5.4	5.1	479.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032633	Flcn	ENSMUST00000151453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032633	Flcn	ENSMUST00000148151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020941	Map3k14	ENSMUST00000021324	ENSMUSP00000021324	TRANSLATION	protein_coding	-	CCDS25516.1	1	942	19	7	1.5	142.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020941	Map3k14	ENSMUST00000152300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020941	Map3k14	ENSMUST00000152677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020941	Map3k14	ENSMUST00000146163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043999	Gpr75	ENSMUST00000109430	ENSMUSP00000105057	TRANSLATION	protein_coding	-	CCDS24508.1	1	540	0	0	6.3	63.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000075588	Hoxb2	ENSMUST00000100523	ENSMUSP00000098092	TRANSLATION	protein_coding	-	CCDS36290.1	1	354	0	0.54	1.5	76.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075588	Hoxb2	ENSMUST00000182030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020389	Cdkl3	ENSMUST00000109079	ENSMUSP00000104707	TRANSLATION	protein_coding	-	CCDS48788.1	5	581	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000120374	ENSMUSP00000113303	TRANSLATION	protein_coding	-	CCDS48789.1	5	610	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000063321	ENSMUSP00000065128	TRANSLATION	protein_coding	-	CCDS48788.1	1	581	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000063303	ENSMUSP00000064315	TRANSLATION	protein_coding	-	CCDS24665.1	1	595	18	7.25	0.5	251	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000020389	Cdkl3	ENSMUST00000109078	ENSMUSP00000104706	TRANSLATION	protein_coding	-	CCDS48791.1	1	457	18	7.25	1.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000109076	ENSMUSP00000104704	TRANSLATION	protein_coding	-	CCDS48792.1	1	353	18	6.81	0.5	251	0	-4,-5	-	-	17.118	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000154701	ENSMUSP00000116009	TRANSLATION	nonsense_mediated_decay	start	-	2	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000147874	ENSMUSP00000119505	TRANSLATION	protein_coding	start	-	2	138	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000109077	ENSMUSP00000104705	TRANSLATION	protein_coding	-	CCDS48792.1	5	353	18	6.81	0.5	251	0	-4,-5	-	-	17.118	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000150736	ENSMUSP00000118607	TRANSLATION	nonsense_mediated_decay	start	-	3	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000143228	ENSMUSP00000123279	TRANSLATION	nonsense_mediated_decay	-	-	1	591	18	7.25	0	251	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000121591	ENSMUSP00000112477	TRANSLATION	protein_coding	-	CCDS48790.1	1	585	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000128853	ENSMUSP00000121945	TRANSLATION	nonsense_mediated_decay	start	-	5	224	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000109081	ENSMUSP00000104709	TRANSLATION	protein_coding	-	CCDS48790.1	5	585	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000135076	ENSMUSP00000117983	TRANSLATION	protein_coding	stop	-	3	192	18	3.5	0	219.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000109080	ENSMUSP00000104708	TRANSLATION	protein_coding	-	CCDS48789.1	1	610	18	7.25	0.5	251	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020389	Cdkl3	ENSMUST00000136021	ENSMUSP00000117315	TRANSLATION	protein_coding	start	-	3	92	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020389	Cdkl3	ENSMUST00000207272	ENSMUSP00000147107	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017716	Birc5	ENSMUST00000093906	ENSMUSP00000091433	TRANSLATION	protein_coding	-	CCDS25695.1	1	121	4	3.198	0.5	87	0	-4,-6	-	-	14.896	MINOR
ENSMUSG00000017716	Birc5	ENSMUST00000081387	ENSMUSP00000079124	TRANSLATION	protein_coding	-	CCDS25694.1	1	140	4	3.75	7.5	87	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000018543	1700001P01Rik	ENSMUST00000107576	ENSMUSP00000103202	TRANSLATION	protein_coding	-	CCDS36297.1	1	155	0	0	1.5	175.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000017692	Rhbdl3	ENSMUST00000157016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017692	Rhbdl3	ENSMUST00000138846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017692	Rhbdl3	ENSMUST00000017836	ENSMUSP00000017836	TRANSLATION	protein_coding	-	CCDS25131.1	1	404	4	0.998	1.5	114.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020282	Rhbdf1	ENSMUST00000144902	ENSMUSP00000122533	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020282	Rhbdf1	ENSMUST00000132578	ENSMUSP00000120543	TRANSLATION	nonsense_mediated_decay	-	-	5	168	0	0	0	106.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020282	Rhbdf1	ENSMUST00000146179	ENSMUSP00000118985	TRANSLATION	nonsense_mediated_decay	-	-	1	168	0	0	0	106.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020282	Rhbdf1	ENSMUST00000137125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020282	Rhbdf1	ENSMUST00000150381	ENSMUSP00000118769	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020282	Rhbdf1	ENSMUST00000143988	ENSMUSP00000117471	TRANSLATION	protein_coding	start	-	5	231	0	0	0	73.4	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000020282	Rhbdf1	ENSMUST00000142274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020282	Rhbdf1	ENSMUST00000143036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020282	Rhbdf1	ENSMUST00000020524	ENSMUSP00000020524	TRANSLATION	protein_coding	-	CCDS24519.1	1	856	0	0	6.4	475	7	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000017311	Pyy	ENSMUST00000017455	ENSMUSP00000017455	TRANSLATION	protein_coding	-	CCDS36339.1	1	98	0	1	1.5	71.6	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000017311	Pyy	ENSMUST00000177304	ENSMUSP00000135292	TRANSLATION	protein_coding	-	CCDS83905.1	2	100	0	1	1.5	71.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000017311	Pyy	ENSMUST00000177149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017311	Pyy	ENSMUST00000127381	ENSMUSP00000134812	TRANSLATION	protein_coding	-	CCDS83905.1	2	100	0	1	1.5	71.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000063316	Rpl27	ENSMUST00000152162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063316	Rpl27	ENSMUST00000139939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063316	Rpl27	ENSMUST00000077856	ENSMUSP00000090305	TRANSLATION	protein_coding	-	CCDS25470.1	1	136	0	0	19.5	159.3	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000063316	Rpl27	ENSMUST00000107249	ENSMUSP00000102870	TRANSLATION	protein_coding	-	CCDS25470.1	2	136	0	0	19.5	159.3	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000063316	Rpl27	ENSMUST00000127514	ENSMUSP00000120418	TRANSLATION	protein_coding	start	-	5	87	0	0	0	103	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042529	Kcnj12	ENSMUST00000089184	ENSMUSP00000086588	TRANSLATION	protein_coding	-	CCDS24805.1	1	427	0	1	2.7	608.3	3	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000042529	Kcnj12	ENSMUST00000108717	ENSMUSP00000104357	TRANSLATION	protein_coding	-	CCDS24805.1	1	427	0	1	2.7	608.3	3	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000042529	Kcnj12	ENSMUST00000041944	ENSMUSP00000041696	TRANSLATION	protein_coding	-	CCDS59563.1	1	529	0	1	1.5	608.3	3	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000020775	Mrpl38	ENSMUST00000106439	ENSMUSP00000102047	TRANSLATION	protein_coding	-	CCDS25658.2	1	380	9	8	3.9	0	0	-2,1	-	-	13	PRINCIPAL:1
ENSMUSG00000020775	Mrpl38	ENSMUST00000142550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020775	Mrpl38	ENSMUST00000145655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020775	Mrpl38	ENSMUST00000133159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020775	Mrpl38	ENSMUST00000138457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020775	Mrpl38	ENSMUST00000124722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078154	Gm12184	ENSMUST00000104959	ENSMUSP00000100565	TRANSLATION	protein_coding	-	-	-	114	0	1	7.5	76.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000069808	Fam57a	ENSMUST00000169560	ENSMUSP00000131151	TRANSLATION	protein_coding	-	-	5	225	0	0	0	57.6	4	0,-4	-	-	0.906	MINOR
ENSMUSG00000069808	Fam57a	ENSMUST00000129853	ENSMUSP00000114936	TRANSLATION	protein_coding	stop	-	2	173	0	0	0	110.4	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000069808	Fam57a	ENSMUST00000094014	ENSMUSP00000091553	TRANSLATION	protein_coding	-	CCDS36230.1	1	257	0	0	1.5	142.5	6	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069808	Fam57a	ENSMUST00000130527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069808	Fam57a	ENSMUST00000127340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017774	Myo1c	ENSMUST00000148659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017774	Myo1c	ENSMUST00000102505	ENSMUSP00000099563	TRANSLATION	protein_coding	-	-	5	1063	15	26.896	7.8	966.8	0	-4,-6	-	-	20.616	ALTERNATIVE:1
ENSMUSG00000017774	Myo1c	ENSMUST00000102504	ENSMUSP00000099562	TRANSLATION	protein_coding	-	CCDS25054.1	1	1028	15	26.83	7.8	966.8	0	-4,-5	-	-	20.484	PRINCIPAL:3
ENSMUSG00000017774	Myo1c	ENSMUST00000136935	ENSMUSP00000121267	TRANSLATION	protein_coding	stop	-	2	80	0	1.066	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000017774	Myo1c	ENSMUST00000146419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017774	Myo1c	ENSMUST00000151174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017774	Myo1c	ENSMUST00000155027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017774	Myo1c	ENSMUST00000123064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017774	Myo1c	ENSMUST00000108431	ENSMUSP00000104069	TRANSLATION	protein_coding	-	CCDS36228.1	1	1044	15	26.896	8.8	966.8	0	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000017774	Myo1c	ENSMUST00000069057	ENSMUSP00000070388	TRANSLATION	protein_coding	-	CCDS25054.1	1	1028	15	26.83	7.8	966.8	0	-4,-5	-	-	20.484	PRINCIPAL:3
ENSMUSG00000078254	Krtap29-1	ENSMUST00000105051	ENSMUSP00000100672	TRANSLATION	protein_coding	-	-	-	342	0	0	0	29.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006127	Inpp5k	ENSMUST00000130318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006127	Inpp5k	ENSMUST00000149134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006127	Inpp5k	ENSMUST00000006286	ENSMUSP00000006286	TRANSLATION	protein_coding	-	CCDS25053.1	1	468	0	5.724	0.5	30.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006127	Inpp5k	ENSMUST00000139856	ENSMUSP00000121060	TRANSLATION	protein_coding	start	-	3	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006127	Inpp5k	ENSMUST00000136605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006127	Inpp5k	ENSMUST00000129298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006127	Inpp5k	ENSMUST00000150857	ENSMUSP00000119996	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018411	Mapt	ENSMUST00000106988	ENSMUSP00000102601	TRANSLATION	protein_coding	-	-	5	733	0	1.45	0	216.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018411	Mapt	ENSMUST00000138384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018411	Mapt	ENSMUST00000145227	ENSMUSP00000114716	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018411	Mapt	ENSMUST00000106993	ENSMUSP00000102606	TRANSLATION	protein_coding	-	-	5	390	0	1.45	0	216.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018411	Mapt	ENSMUST00000146353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018411	Mapt	ENSMUST00000106992	ENSMUSP00000102605	TRANSLATION	protein_coding	-	CCDS25528.1	1	372	0	1.45	1.5	216.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018411	Mapt	ENSMUST00000132245	ENSMUSP00000119145	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018411	Mapt	ENSMUST00000144836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018411	Mapt	ENSMUST00000100347	ENSMUSP00000097919	TRANSLATION	protein_coding	-	CCDS25527.1	1	430	0	1.45	2.7	216.4	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000018411	Mapt	ENSMUST00000126820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018411	Mapt	ENSMUST00000106989	ENSMUSP00000102602	TRANSLATION	protein_coding	-	-	5	749	0	1.45	0	216.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000018411	Mapt	ENSMUST00000132977	ENSMUSP00000123260	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078922	Tgtp1	ENSMUST00000068063	ENSMUSP00000069914	TRANSLATION	protein_coding	-	CCDS24593.1	1	415	15	2.064	0.5	585.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078922	Tgtp1	ENSMUST00000132745	ENSMUSP00000150328	TRANSLATION	protein_coding	stop	-	5	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078922	Tgtp1	ENSMUST00000146439	ENSMUSP00000123089	TRANSLATION	protein_coding	stop	-	2	132	9	1.264	0	188	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000148759	ENSMUSP00000137716	TRANSLATION	nonsense_mediated_decay	start	-	2	89	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000020755	ENSMUSP00000020755	TRANSLATION	protein_coding	-	CCDS24492.1	1	820	0	2.7	15	271.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000127818	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000127621	ENSMUSP00000117918	TRANSLATION	protein_coding	start/stop	-	5	192	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000156280	ENSMUSP00000119241	TRANSLATION	protein_coding	stop	-	3	194	0	1.766	0	87	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000139283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020463	Ppp4r3b	ENSMUST00000102856	ENSMUSP00000099920	TRANSLATION	protein_coding	-	-	1	616	0	2.7	0	271.8	0	-4,-6	-	-	12	MINOR
ENSMUSG00000014245	Pigl	ENSMUST00000014389	ENSMUSP00000014389	TRANSLATION	protein_coding	-	CCDS24824.1	1	252	3	0	3.9	90.2	0	0,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000014245	Pigl	ENSMUST00000147918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042506	Usp22	ENSMUST00000174035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042506	Usp22	ENSMUST00000041683	ENSMUSP00000041263	TRANSLATION	protein_coding	-	CCDS24807.1	1	525	27	7.332	3.9	246.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000042506	Usp22	ENSMUST00000174220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042506	Usp22	ENSMUST00000174301	ENSMUSP00000135872	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042506	Usp22	ENSMUST00000173525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020843	Timm22	ENSMUST00000021203	ENSMUSP00000021203	TRANSLATION	protein_coding	-	CCDS25065.1	1	194	0	0	6.5	101.1	1	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000020843	Timm22	ENSMUST00000164102	ENSMUSP00000132836	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020843	Timm22	ENSMUST00000152183	ENSMUSP00000123281	TRANSLATION	protein_coding	stop	-	2	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020843	Timm22	ENSMUST00000120699	ENSMUSP00000113238	TRANSLATION	protein_coding	-	CCDS70245.1	3	141	0	0	0.5	95.8	1	0,-3	-	-	5.682	MINOR
ENSMUSG00000018476	Kdm6b	ENSMUST00000094077	ENSMUSP00000091620	TRANSLATION	protein_coding	-	CCDS24895.1	5	1641	15	10.83	0.5	105.8	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000018476	Kdm6b	ENSMUST00000156562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020458	Rtn4	ENSMUST00000170731	ENSMUSP00000126413	TRANSLATION	protein_coding	-	CCDS24499.1	1	356	0	1.8	0.5	161.3	5	-4,-5	-	-	12	MINOR
ENSMUSG00000020458	Rtn4	ENSMUST00000141719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020458	Rtn4	ENSMUST00000156217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020458	Rtn4	ENSMUST00000102843	ENSMUSP00000099907	TRANSLATION	protein_coding	-	CCDS24501.1	1	1162	0	1.8	0.5	161.3	5	-4,-5	-	-	12	MINOR
ENSMUSG00000020458	Rtn4	ENSMUST00000125735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020458	Rtn4	ENSMUST00000078830	ENSMUSP00000077875	TRANSLATION	protein_coding	-	CCDS24499.1	1	356	0	1.8	0.5	161.3	5	-4,-5	-	-	12	MINOR
ENSMUSG00000020458	Rtn4	ENSMUST00000126162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020458	Rtn4	ENSMUST00000102842	ENSMUSP00000099906	TRANSLATION	protein_coding	-	CCDS24500.1	1	375	0	1.8	0.5	161.3	5	-4,-5	-	-	12	MINOR
ENSMUSG00000020458	Rtn4	ENSMUST00000102841	ENSMUSP00000099905	TRANSLATION	protein_coding	-	CCDS24502.1	1	1046	0	1.8	0.5	161.3	5	-3,-5	-	-	12	MINOR
ENSMUSG00000020458	Rtn4	ENSMUST00000060992	ENSMUSP00000053754	TRANSLATION	protein_coding	-	CCDS24503.1	1	199	0	1.8	12.8	161.3	5	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020297	Nsg2	ENSMUST00000093219	ENSMUSP00000090907	TRANSLATION	protein_coding	-	-	1	100	0	0	0.5	97.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020297	Nsg2	ENSMUST00000020537	ENSMUSP00000020537	TRANSLATION	protein_coding	-	CCDS24516.1	1	171	0	0	7.5	238.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020297	Nsg2	ENSMUST00000109409	ENSMUSP00000105036	TRANSLATION	protein_coding	-	-	2	92	0	0	0	99	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020462	Cfap36	ENSMUST00000020754	ENSMUSP00000020754	TRANSLATION	protein_coding	-	CCDS24493.1	1	343	0	3.75	5.1	136.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020462	Cfap36	ENSMUST00000127940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020462	Cfap36	ENSMUST00000141862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020462	Cfap36	ENSMUST00000144627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020462	Cfap36	ENSMUST00000134599	ENSMUSP00000118938	TRANSLATION	protein_coding	stop	-	5	137	0	3.065	0	97.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011254	Thg1l	ENSMUST00000011398	ENSMUSP00000011398	TRANSLATION	protein_coding	-	CCDS36132.1	1	298	14	5.75	1.5	331.5	0	-2,1	-	-	18.161	PRINCIPAL:1
ENSMUSG00000011254	Thg1l	ENSMUST00000131182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011254	Thg1l	ENSMUST00000133851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011254	Thg1l	ENSMUST00000109254	ENSMUSP00000104877	TRANSLATION	protein_coding	-	CCDS70167.1	1	238	8	4.75	4.1	283.2	0	-4,-6	-	-	10.102	MINOR
ENSMUSG00000011254	Thg1l	ENSMUST00000133238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038692	Hoxb4	ENSMUST00000049241	ENSMUSP00000048002	TRANSLATION	protein_coding	-	CCDS25297.1	1	250	0	1	1.5	77	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035992	Fnip1	ENSMUST00000046835	ENSMUSP00000049026	TRANSLATION	protein_coding	-	CCDS24698.1	1	1165	0	0	5.1	615.9	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000035992	Fnip1	ENSMUST00000143650	ENSMUSP00000121399	TRANSLATION	protein_coding	stop	-	1	631	0	0	0	390.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020904	Cfap52	ENSMUST00000126766	ENSMUSP00000116496	TRANSLATION	protein_coding	-	-	1	342	0	3.79	0	34.4	0	-4,-5	-	-	2.556	MINOR
ENSMUSG00000020904	Cfap52	ENSMUST00000021287	ENSMUSP00000021287	TRANSLATION	protein_coding	-	CCDS24862.1	1	620	0	7.87	6.4	80.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020904	Cfap52	ENSMUST00000123900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020904	Cfap52	ENSMUST00000142929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019437	Tlcd1	ENSMUST00000127587	ENSMUSP00000114202	TRANSLATION	protein_coding	-	CCDS25092.1	1	247	0	0	1.5	70.8	14	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000019437	Tlcd1	ENSMUST00000098545	ENSMUSP00000096145	TRANSLATION	protein_coding	-	-	1	220	0	0	0	57	12	-2,-6	-	-	4.83	MINOR
ENSMUSG00000019437	Tlcd1	ENSMUST00000140379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019437	Tlcd1	ENSMUST00000108338	ENSMUSP00000103975	TRANSLATION	protein_coding	-	-	1	127	0	0	0	42.1	5	-2,-6	-	-	3.57	MINOR
ENSMUSG00000019437	Tlcd1	ENSMUST00000145507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019437	Tlcd1	ENSMUST00000141578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019437	Tlcd1	ENSMUST00000147819	ENSMUSP00000126593	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	26	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000019437	Tlcd1	ENSMUST00000092880	ENSMUSP00000090556	TRANSLATION	protein_coding	-	CCDS70257.1	1	230	0	0	0.5	59.2	11	-4,-2	-	-	5.016	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000127871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000148805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000103099	ENSMUSP00000099388	TRANSLATION	protein_coding	-	CCDS25475.1	1	988	8	6.42	0.5	176.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000017119	Nbr1	ENSMUST00000149019	ENSMUSP00000119900	TRANSLATION	protein_coding	start	-	1	712	2	3.33	0	106.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000149170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017119	Nbr1	ENSMUST00000107218	ENSMUSP00000102836	TRANSLATION	protein_coding	-	CCDS25475.1	5	988	8	6.42	0.5	176.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000017119	Nbr1	ENSMUST00000136185	ENSMUSP00000134500	TRANSLATION	nonsense_mediated_decay	-	-	3	41	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000071537	ENSMUSP00000071467	TRANSLATION	protein_coding	-	-	5	988	8	6.09	0	161.8	0	-4,-5	-	-	16.446	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000127421	ENSMUSP00000121628	TRANSLATION	protein_coding	stop	-	3	43	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000123558	ENSMUSP00000133619	TRANSLATION	nonsense_mediated_decay	-	-	1	888	8	5.09	0	176.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000174013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000147239	ENSMUSP00000122097	TRANSLATION	protein_coding	stop	-	5	43	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017119	Nbr1	ENSMUST00000184092	-	NO_TRANSLATION	misc_RNA
ENSMUSG00000017119	Nbr1	ENSMUST00000107212	ENSMUSP00000102830	TRANSLATION	protein_coding	-	-	5	963	8	6.42	0	176.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000017119	Nbr1	ENSMUST00000141170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000172744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000144517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017119	Nbr1	ENSMUST00000103098	ENSMUSP00000099387	TRANSLATION	protein_coding	-	CCDS25475.1	1	988	8	6.42	0.5	176.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000017119	Nbr1	ENSMUST00000146452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017119	Nbr1	ENSMUST00000107213	ENSMUSP00000102831	TRANSLATION	protein_coding	-	CCDS56811.1	1	951	8	6.42	0.5	176.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000017119	Nbr1	ENSMUST00000107208	ENSMUSP00000102826	TRANSLATION	protein_coding	-	CCDS56810.1	1	906	8	5.09	0.5	176.7	0	-4,-5	-	-	15.342	MINOR
ENSMUSG00000035530	Eif1	ENSMUST00000139846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035530	Eif1	ENSMUST00000152521	ENSMUSP00000136642	TRANSLATION	protein_coding	start	-	2	90	0	2.25	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035530	Eif1	ENSMUST00000049385	ENSMUSP00000041538	TRANSLATION	protein_coding	-	CCDS25417.1	1	113	0	3.58	19.5	100.7	0	-4,-5	-	-	15.982	PRINCIPAL:1
ENSMUSG00000035530	Eif1	ENSMUST00000151513	ENSMUSP00000137558	TRANSLATION	protein_coding	stop	-	3	110	0	2	0	67	0	-4,0	-	-	-1	MINOR
ENSMUSG00000035530	Eif1	ENSMUST00000132618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018672	Copz2	ENSMUST00000018816	ENSMUSP00000018816	TRANSLATION	protein_coding	-	CCDS25305.1	1	205	0	5.33	1.5	122.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000018672	Copz2	ENSMUST00000145633	ENSMUSP00000119593	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018672	Copz2	ENSMUST00000154191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018672	Copz2	ENSMUST00000147710	ENSMUSP00000118356	TRANSLATION	nonsense_mediated_decay	start	-	3	51	0	0.83	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000018672	Copz2	ENSMUST00000155696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034274	Thoc5	ENSMUST00000101615	ENSMUSP00000099137	TRANSLATION	protein_coding	-	-	5	635	0	0	0	434	0	-4,-5	-	-	6	MINOR
ENSMUSG00000034274	Thoc5	ENSMUST00000038237	ENSMUSP00000045580	TRANSLATION	protein_coding	-	CCDS24393.1	1	683	0	0	7.6	434	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034274	Thoc5	ENSMUST00000155872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034274	Thoc5	ENSMUST00000144371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034274	Thoc5	ENSMUST00000142543	ENSMUSP00000118940	TRANSLATION	protein_coding	stop	-	5	300	0	0	0	316.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034274	Thoc5	ENSMUST00000148117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058807	Olfr331	ENSMUST00000170501	ENSMUSP00000132693	TRANSLATION	protein_coding	-	-	-	318	0	0.42	1.5	145.1	6	-4,-7	-	-	12.244	MINOR
ENSMUSG00000058807	Olfr331	ENSMUST00000081743	ENSMUSP00000080440	TRANSLATION	protein_coding	-	CCDS56773.2	-	324	0	0.42	5.1	145.1	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020599	Rgs9	ENSMUST00000103062	ENSMUSP00000099351	TRANSLATION	protein_coding	-	-	5	449	0	5.25	0	143.2	0	-4,-7	-	-	2.49	MINOR
ENSMUSG00000020599	Rgs9	ENSMUST00000106706	ENSMUSP00000102317	TRANSLATION	protein_coding	-	CCDS48969.1	1	484	0	11.83	4.2	201.7	0	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000020599	Rgs9	ENSMUST00000020920	ENSMUSP00000020920	TRANSLATION	protein_coding	-	CCDS25576.1	1	675	0	11.83	1.5	201.7	0	-4,-7	-	-	12.156	PRINCIPAL:3
ENSMUSG00000020599	Rgs9	ENSMUST00000106704	ENSMUSP00000102315	TRANSLATION	protein_coding	-	-	1	232	0	6.25	0	49.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020599	Rgs9	ENSMUST00000156785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034297	Med13	ENSMUST00000043624	ENSMUSP00000044268	TRANSLATION	protein_coding	-	CCDS36267.1	2	2171	0	0	5.3	831.8	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000034297	Med13	ENSMUST00000136622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034297	Med13	ENSMUST00000140514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034297	Med13	ENSMUST00000144983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018574	Acadvl	ENSMUST00000156733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018574	Acadvl	ENSMUST00000018718	ENSMUSP00000018718	TRANSLATION	protein_coding	-	-	5	634	29	15	2.4	295.9	0	-4,0	-	-	18.483	ALTERNATIVE:2
ENSMUSG00000018574	Acadvl	ENSMUST00000146129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018574	Acadvl	ENSMUST00000102574	ENSMUSP00000099634	TRANSLATION	protein_coding	-	CCDS24931.1	1	656	29	15	3.9	295.9	0	-4,0	-	-	19	PRINCIPAL:2
ENSMUSG00000018574	Acadvl	ENSMUST00000145478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018574	Acadvl	ENSMUST00000137187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018574	Acadvl	ENSMUST00000134516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047260	Emc6	ENSMUST00000108480	ENSMUSP00000104120	TRANSLATION	protein_coding	-	CCDS24999.1	2	110	0	0	16.2	83	2	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000047260	Emc6	ENSMUST00000054952	ENSMUSP00000060892	TRANSLATION	protein_coding	-	CCDS24999.1	1	110	0	0	16.2	83	2	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000018287	Spag7	ENSMUST00000137691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018287	Spag7	ENSMUST00000124691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018287	Spag7	ENSMUST00000129434	ENSMUSP00000115098	TRANSLATION	protein_coding	stop	-	3	155	0	3.1	0	40.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018287	Spag7	ENSMUST00000018431	ENSMUSP00000018431	TRANSLATION	protein_coding	-	CCDS24962.1	1	227	0	3.43	8.8	53.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078656	Vps25	ENSMUST00000100414	ENSMUSP00000097981	TRANSLATION	protein_coding	-	CCDS70313.1	1	172	0	4.28	0.5	177.2	0	-4,-2	-	-	9.678	MINOR
ENSMUSG00000078656	Vps25	ENSMUST00000144306	ENSMUSP00000131026	TRANSLATION	nonsense_mediated_decay	-	-	5	91	0	2.764	0	94.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078656	Vps25	ENSMUST00000107280	ENSMUSP00000102901	TRANSLATION	protein_coding	-	CCDS70311.1	2	184	0	5.146	0.5	176.6	0	-4,-2	-	-	11.376	MINOR
ENSMUSG00000078656	Vps25	ENSMUST00000121331	ENSMUSP00000114100	TRANSLATION	protein_coding	-	-	2	128	0	3.58	0	121.9	0	-4,-5	-	-	4.962	MINOR
ENSMUSG00000078656	Vps25	ENSMUST00000007533	ENSMUSP00000007533	TRANSLATION	protein_coding	-	CCDS70312.1	1	148	0	4.08	0.5	177.2	0	-4,-2	-	-	9.282	MINOR
ENSMUSG00000078656	Vps25	ENSMUST00000042477	ENSMUSP00000042088	TRANSLATION	protein_coding	-	CCDS25458.1	1	176	0	5.08	13	187	0	-4,-2	-	-	15.868	PRINCIPAL:1
ENSMUSG00000078656	Vps25	ENSMUST00000123529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049892	Rasd1	ENSMUST00000062405	ENSMUSP00000051959	TRANSLATION	protein_coding	-	CCDS24781.1	1	280	20	1.12	7.6	124.7	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000037944	Ccr7	ENSMUST00000103134	ENSMUSP00000099423	TRANSLATION	protein_coding	-	CCDS25373.1	1	378	0	0.8	7.5	163.9	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037857	Nufip2	ENSMUST00000155238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037857	Nufip2	ENSMUST00000100802	ENSMUSP00000098365	TRANSLATION	protein_coding	-	CCDS25083.1	1	692	0	0	0.5	958.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000037857	Nufip2	ENSMUST00000126942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037857	Nufip2	ENSMUST00000181023	ENSMUSP00000137922	TRANSLATION	protein_coding	-	-	1	710	0	0	0	933.9	0	-4,-6	-	-	4.506	MINOR
ENSMUSG00000049588	Ccdc69	ENSMUST00000108880	ENSMUSP00000104508	TRANSLATION	protein_coding	-	-	1	176	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000049588	Ccdc69	ENSMUST00000055040	ENSMUSP00000054840	TRANSLATION	protein_coding	-	CCDS36155.1	1	202	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000017176	Nt5c3b	ENSMUST00000107398	ENSMUSP00000103021	TRANSLATION	protein_coding	-	CCDS48930.1	1	261	7	5.83	0.5	357	0	-4,-7	-	-	12.846	MINOR
ENSMUSG00000017176	Nt5c3b	ENSMUST00000155025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017176	Nt5c3b	ENSMUST00000154692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017176	Nt5c3b	ENSMUST00000092689	ENSMUSP00000090361	TRANSLATION	protein_coding	-	-	1	257	4	5.75	2.4	409.6	0	-4,-2	-	-	13.911	MINOR
ENSMUSG00000017176	Nt5c3b	ENSMUST00000140381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017176	Nt5c3b	ENSMUST00000107399	ENSMUSP00000103022	TRANSLATION	protein_coding	-	CCDS48930.1	1	261	7	5.83	0.5	357	0	-4,-7	-	-	12.846	MINOR
ENSMUSG00000017176	Nt5c3b	ENSMUST00000092688	ENSMUSP00000090360	TRANSLATION	protein_coding	-	CCDS48931.1	1	300	7	6.83	7.5	409.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000017176	Nt5c3b	ENSMUST00000107397	ENSMUSP00000103020	TRANSLATION	protein_coding	-	-	1	292	7	6.83	0	409.6	0	-4,-1	-	-	18	MINOR
ENSMUSG00000017176	Nt5c3b	ENSMUST00000140034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017176	Nt5c3b	ENSMUST00000130666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017176	Nt5c3b	ENSMUST00000135557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020482	Ccdc117	ENSMUST00000020776	ENSMUSP00000020776	TRANSLATION	protein_coding	-	CCDS24401.1	1	277	0	0	1.5	178.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050107	Haspin	ENSMUST00000052140	ENSMUSP00000055806	TRANSLATION	protein_coding	-	CCDS24997.1	-	754	20	0.8	0.5	0	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109992	ENSMUSP00000105619	TRANSLATION	protein_coding	-	CCDS24371.1	5	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109993	ENSMUSP00000105620	TRANSLATION	protein_coding	-	CCDS24371.1	1	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109989	ENSMUSP00000105616	TRANSLATION	protein_coding	-	CCDS24371.1	1	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109988	ENSMUSP00000105615	TRANSLATION	protein_coding	-	CCDS24371.1	5	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109990	ENSMUSP00000105617	TRANSLATION	protein_coding	-	CCDS24371.1	1	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000109991	ENSMUSP00000105618	TRANSLATION	protein_coding	-	CCDS24371.1	5	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000020432	Tcn2	ENSMUST00000020710	ENSMUSP00000020710	TRANSLATION	protein_coding	-	CCDS24371.1	5	430	32	7.98	1.5	412.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000040829	Zmynd15	ENSMUST00000126105	ENSMUSP00000134599	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040829	Zmynd15	ENSMUST00000147289	ENSMUSP00000136813	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040829	Zmynd15	ENSMUST00000136029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040829	Zmynd15	ENSMUST00000108563	ENSMUSP00000104203	TRANSLATION	protein_coding	-	-	1	606	8	0	0	34.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040829	Zmynd15	ENSMUST00000039093	ENSMUSP00000048816	TRANSLATION	protein_coding	-	CCDS24949.1	1	736	8	0	0.5	34.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000040829	Zmynd15	ENSMUST00000092958	ENSMUSP00000090635	TRANSLATION	protein_coding	-	-	5	696	8	0	0.5	34.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000001123	Lgals9	ENSMUST00000108269	ENSMUSP00000103904	TRANSLATION	protein_coding	-	CCDS25116.1	1	353	13	7.7	4.1	263.7	0	-4,-5	-	-	18.76	PRINCIPAL:3
ENSMUSG00000001123	Lgals9	ENSMUST00000108268	ENSMUSP00000103903	TRANSLATION	protein_coding	-	CCDS48858.1	1	322	13	7.7	3.9	263.7	0	-4,-5	-	-	18.695	ALTERNATIVE:2
ENSMUSG00000001123	Lgals9	ENSMUST00000073001	ENSMUSP00000072764	TRANSLATION	protein_coding	-	-	5	352	13	7.82	4.1	263.7	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000001123	Lgals9	ENSMUST00000140073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006056	Calcoco2	ENSMUST00000097162	ENSMUSP00000103309	TRANSLATION	protein_coding	-	-	5	310	0	3	0	96	0	-4,-5	-	-	11.25	ALTERNATIVE:2
ENSMUSG00000006056	Calcoco2	ENSMUST00000068686	ENSMUSP00000087407	TRANSLATION	protein_coding	-	CCDS59567.1	1	331	0	3	0.5	108.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000017631	Abr	ENSMUST00000137261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017631	Abr	ENSMUST00000108408	ENSMUSP00000104045	TRANSLATION	protein_coding	-	CCDS83843.1	5	822	0	9.394	7.8	340.8	0	-4,-5	-	-	8.064	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000176179	ENSMUSP00000135515	TRANSLATION	protein_coding	stop	-	2	128	0	2.024	0	36	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000176024	ENSMUSP00000135691	TRANSLATION	protein_coding	stop	-	5	91	0	1.344	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000108407	ENSMUSP00000104044	TRANSLATION	protein_coding	-	CCDS25067.1	1	813	0	9.594	6.5	340.8	0	-4,-5	-	-	8.03	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000141442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017631	Abr	ENSMUST00000131059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017631	Abr	ENSMUST00000094012	ENSMUSP00000091551	TRANSLATION	protein_coding	-	CCDS36231.1	1	871	0	9.594	0.5	340.8	0	-4,-2	-	-	6.198	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000151526	ENSMUSP00000135544	TRANSLATION	protein_coding	stop	-	3	161	0	2.46	0	81.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000238684	ENSMUSP00000158745	TRANSLATION	protein_coding	-	-	-	1185	0	9.594	0	437.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017631	Abr	ENSMUST00000072740	ENSMUSP00000072522	TRANSLATION	protein_coding	-	CCDS25066.1	5	859	0	9.594	13	340.8	0	-4,-6	-	-	10.198	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000130364	ENSMUSP00000135174	TRANSLATION	nonsense_mediated_decay	start	-	5	146	0	1.9	0	39.4	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000017631	Abr	ENSMUST00000065028	ENSMUSP00000068982	TRANSLATION	protein_coding	-	CCDS70246.1	1	641	0	6.89	6.2	268.7	0	-2,-6	-	-	2.326	MINOR
ENSMUSG00000086962	Gm12248	ENSMUST00000137124	ENSMUSP00000151429	TRANSLATION	protein_coding	start/stop	-	5	311	0	0	2.4	72.8	5	1,-3	-	-	-1	MINOR
ENSMUSG00000086962	Gm12248	ENSMUST00000218429	ENSMUSP00000151952	TRANSLATION	protein_coding	-	-	5	295	0	0	0	72.8	4	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000086962	Gm12248	ENSMUST00000219877	ENSMUSP00000151997	TRANSLATION	protein_coding	-	-	5	313	0	0	0	72.8	5	1,-3	-	-	6	PRINCIPAL:5
ENSMUSG00000020905	Usp43	ENSMUST00000108677	ENSMUSP00000104317	TRANSLATION	protein_coding	-	CCDS70212.1	1	1127	7	4.22	0.5	163.1	0	-4,-7	-	-	15.588	MINOR
ENSMUSG00000020905	Usp43	ENSMUST00000021288	ENSMUSP00000021288	TRANSLATION	protein_coding	-	CCDS24861.2	1	1132	8	4.22	0.5	190.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020905	Usp43	ENSMUST00000129961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020905	Usp43	ENSMUST00000152120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037145	2210407C18Rik	ENSMUST00000108821	ENSMUSP00000104449	TRANSLATION	protein_coding	-	CCDS24736.1	5	220	0	0	0.5	27.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000037145	2210407C18Rik	ENSMUST00000126695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037145	2210407C18Rik	ENSMUST00000048801	ENSMUSP00000039283	TRANSLATION	protein_coding	-	CCDS24736.1	1	220	0	0	0.5	27.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020679	Hnf1b	ENSMUST00000146786	ENSMUSP00000123297	TRANSLATION	protein_coding	stop	-	3	199	0	3	0	167.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020679	Hnf1b	ENSMUST00000108114	ENSMUSP00000103749	TRANSLATION	protein_coding	-	CCDS70271.1	1	532	0	3.93	7.5	645.8	0	-4,-7	-	-	12.999	MINOR
ENSMUSG00000020679	Hnf1b	ENSMUST00000135975	ENSMUSP00000117036	TRANSLATION	protein_coding	stop	-	3	56	0	1	0	113.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020679	Hnf1b	ENSMUST00000021016	ENSMUSP00000021016	TRANSLATION	protein_coding	-	CCDS25179.1	1	558	0	4.68	8.8	645.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020679	Hnf1b	ENSMUST00000108113	ENSMUSP00000103748	TRANSLATION	protein_coding	-	CCDS70272.1	1	435	0	3.75	0.5	542.1	0	-4,-5	-	-	4.14	MINOR
ENSMUSG00000069792	Wfdc17	ENSMUST00000092836	ENSMUSP00000090511	TRANSLATION	protein_coding	-	CCDS36257.1	1	76	0	0.8	1.5	45.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000039329	Tex19.1	ENSMUST00000155694	ENSMUSP00000114548	TRANSLATION	protein_coding	stop	-	2	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039329	Tex19.1	ENSMUST00000039088	ENSMUSP00000048592	TRANSLATION	protein_coding	-	CCDS25768.1	1	351	0	0	0.5	245.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038517	Tbkbp1	ENSMUST00000107615	ENSMUSP00000103240	TRANSLATION	protein_coding	-	CCDS48895.1	5	610	4	0	1.5	62	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000038517	Tbkbp1	ENSMUST00000107613	ENSMUSP00000103238	TRANSLATION	nonsense_mediated_decay	-	-	1	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038517	Tbkbp1	ENSMUST00000118375	ENSMUSP00000112396	TRANSLATION	protein_coding	-	CCDS48895.1	5	610	4	0	1.5	62	0	-4,-5	-	-	10	PRINCIPAL:2
ENSMUSG00000038517	Tbkbp1	ENSMUST00000146374	ENSMUSP00000114460	TRANSLATION	protein_coding	stop	-	3	151	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038517	Tbkbp1	ENSMUST00000066078	ENSMUSP00000065461	TRANSLATION	protein_coding	-	-	5	611	4	0	1.5	62	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000038517	Tbkbp1	ENSMUST00000107614	ENSMUSP00000103239	TRANSLATION	protein_coding	-	-	5	611	4	0	1.5	62	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000046755	Kif2b	ENSMUST00000061019	ENSMUSP00000058084	TRANSLATION	protein_coding	-	CCDS36281.1	-	668	11	1	0.5	305.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020395	Itk	ENSMUST00000109237	ENSMUSP00000104860	TRANSLATION	protein_coding	-	CCDS70169.1	1	625	32	14.3	1.5	528	0	-4,-7	-	-	17.781	MINOR
ENSMUSG00000020395	Itk	ENSMUST00000020664	ENSMUSP00000020664	TRANSLATION	protein_coding	-	CCDS24575.2	1	619	32	14.3	10.8	534.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020395	Itk	ENSMUST00000155991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020395	Itk	ENSMUST00000101306	ENSMUSP00000098864	TRANSLATION	protein_coding	-	CCDS70168.1	1	264	15	6.566	0.5	149.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000025156	Gps1	ENSMUST00000116305	ENSMUSP00000112007	TRANSLATION	protein_coding	-	CCDS49011.1	1	487	0	11.83	15	309.9	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000025156	Gps1	ENSMUST00000156723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025156	Gps1	ENSMUST00000144519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025156	Gps1	ENSMUST00000208737	ENSMUSP00000147152	TRANSLATION	protein_coding	-	-	5	486	0	11.68	15	309.3	0	-4,-6	-	-	15.664	ALTERNATIVE:1
ENSMUSG00000025156	Gps1	ENSMUST00000100134	ENSMUSP00000097711	TRANSLATION	protein_coding	-	CCDS83950.1	2	490	0	11.68	2.7	309.9	0	-4,-6	-	-	12.184	MINOR
ENSMUSG00000025156	Gps1	ENSMUST00000172809	ENSMUSP00000133855	TRANSLATION	protein_coding	-	CCDS25758.2	1	526	0	11.83	6.4	309.9	0	-4,-1	-	-	13.544	MINOR
ENSMUSG00000025156	Gps1	ENSMUST00000153678	ENSMUSP00000123512	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025156	Gps1	ENSMUST00000132422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038255	Neurod2	ENSMUST00000041685	ENSMUSP00000041373	TRANSLATION	protein_coding	-	CCDS25343.1	1	383	0	0.2	6.5	197.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020932	Gfap	ENSMUST00000127909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020932	Gfap	ENSMUST00000077902	ENSMUSP00000077061	TRANSLATION	protein_coding	-	CCDS48950.1	1	428	0	5.55	2.9	393.1	0	-4,0	-	-	12.904	ALTERNATIVE:2
ENSMUSG00000020932	Gfap	ENSMUST00000067444	ENSMUSP00000064691	TRANSLATION	protein_coding	-	CCDS25507.1	1	430	0	5.55	5.2	393.1	0	-4,0	-	-	14	PRINCIPAL:3
ENSMUSG00000003948	Mmd	ENSMUST00000107887	ENSMUSP00000103519	TRANSLATION	protein_coding	-	-	1	187	0	0	0	47.6	4	-4,-1	-	-	4.362	MINOR
ENSMUSG00000003948	Mmd	ENSMUST00000004050	ENSMUSP00000004050	TRANSLATION	protein_coding	-	CCDS25240.1	1	238	0	0	12.8	65.5	5	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000047773	Ankfn1	ENSMUST00000169201	ENSMUSP00000132133	TRANSLATION	protein_coding	start	-	2	743	0	1.92	0	73	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000047773	Ankfn1	ENSMUST00000050983	ENSMUSP00000049776	TRANSLATION	protein_coding	-	CCDS25237.1	1	403	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000047773	Ankfn1	ENSMUST00000207171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047773	Ankfn1	ENSMUST00000208932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047773	Ankfn1	ENSMUST00000207350	ENSMUSP00000146500	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047773	Ankfn1	ENSMUST00000128717	ENSMUSP00000121290	TRANSLATION	protein_coding	-	-	5	763	0	1.92	4.8	73	0	-4,-2	-	-	13	ALTERNATIVE:1
ENSMUSG00000047773	Ankfn1	ENSMUST00000238273	ENSMUSP00000158789	TRANSLATION	protein_coding	-	-	-	1286	0	1.92	0	73	0	-4,-7	-	-	12	PRINCIPAL:5
ENSMUSG00000047773	Ankfn1	ENSMUST00000207815	ENSMUSP00000146987	TRANSLATION	protein_coding	start	-	5	1083	0	1.92	0	73	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036117	Il5	ENSMUST00000048605	ENSMUSP00000043369	TRANSLATION	protein_coding	-	CCDS24685.1	1	133	0	3.33	1.5	203.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094483	Purb	ENSMUST00000179343	ENSMUSP00000136957	TRANSLATION	protein_coding	-	CCDS24420.1	-	324	0	0.42	0.5	327.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046909	Tefm	ENSMUST00000131601	ENSMUSP00000114770	TRANSLATION	protein_coding	stop	-	5	221	0	0	0	35.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046909	Tefm	ENSMUST00000136996	ENSMUSP00000122596	TRANSLATION	protein_coding	start	-	3	56	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000046909	Tefm	ENSMUST00000050207	ENSMUSP00000059304	TRANSLATION	protein_coding	-	CCDS36241.1	1	364	0	0	1.5	35.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020876	Snx11	ENSMUST00000127375	ENSMUSP00000115789	TRANSLATION	protein_coding	stop	-	5	197	0	4.15	0	92.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020876	Snx11	ENSMUST00000107661	ENSMUSP00000103288	TRANSLATION	protein_coding	-	CCDS25302.1	1	271	0	4.15	6.3	92.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020876	Snx11	ENSMUST00000021246	ENSMUSP00000021246	TRANSLATION	protein_coding	-	CCDS25302.1	1	271	0	4.15	6.3	92.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020876	Snx11	ENSMUST00000136799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020876	Snx11	ENSMUST00000132354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020876	Snx11	ENSMUST00000125025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020691	Mettl2	ENSMUST00000129012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020691	Mettl2	ENSMUST00000132185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020691	Mettl2	ENSMUST00000136214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020691	Mettl2	ENSMUST00000021030	ENSMUSP00000021030	TRANSLATION	protein_coding	-	CCDS25538.1	1	389	17	1.39	0.5	62	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020691	Mettl2	ENSMUST00000155460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020945	Lyzl6	ENSMUST00000140430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020945	Lyzl6	ENSMUST00000021328	ENSMUSP00000021328	TRANSLATION	protein_coding	-	CCDS25519.1	1	148	2	3.3	6.3	134.2	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000020945	Lyzl6	ENSMUST00000107014	ENSMUSP00000102628	TRANSLATION	protein_coding	-	CCDS25519.1	1	148	2	3.3	6.3	134.2	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000018559	Ctdnep1	ENSMUST00000141623	ENSMUSP00000137199	TRANSLATION	protein_coding	stop	-	3	89	4	2.23	0	98.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018559	Ctdnep1	ENSMUST00000138246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018559	Ctdnep1	ENSMUST00000131531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018559	Ctdnep1	ENSMUST00000152226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018559	Ctdnep1	ENSMUST00000108593	ENSMUSP00000104234	TRANSLATION	protein_coding	-	CCDS24927.1	1	244	10	4.42	13.8	180.7	0	-1,0	-	-	22	PRINCIPAL:1
ENSMUSG00000020490	Btnl10	ENSMUST00000108818	ENSMUSP00000104446	TRANSLATION	protein_coding	-	-	1	275	0	1.8	0.5	90.2	0	-1,-3	-	-	3.684	MINOR
ENSMUSG00000020490	Btnl10	ENSMUST00000142499	ENSMUSP00000124234	TRANSLATION	nonsense_mediated_decay	-	-	5	492	0	2.998	1.5	188.8	1	-1,-3	-	-	-1	MINOR
ENSMUSG00000020490	Btnl10	ENSMUST00000020792	ENSMUSP00000020792	TRANSLATION	protein_coding	-	CCDS24753.1	5	275	0	1.8	0.5	90.2	0	-1,-3	-	-	3.684	MINOR
ENSMUSG00000020490	Btnl10	ENSMUST00000069941	ENSMUSP00000063279	TRANSLATION	protein_coding	-	-	1	492	0	2.998	1.5	188.8	1	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000093485	Gm20708	ENSMUST00000132298	ENSMUSP00000135368	TRANSLATION	protein_coding,RT	-	-	2	155	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000070332	Trim80	ENSMUST00000093914	ENSMUSP00000091442	TRANSLATION	protein_coding	-	CCDS36372.1	1	624	12	1.96	0.5	115.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000048294	Krtap4-13	ENSMUST00000050106	ENSMUSP00000053810	TRANSLATION	protein_coding	-	CCDS48921.1	-	165	0	0	0.5	119.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018882	Mrpl45	ENSMUST00000132168	ENSMUSP00000116306	TRANSLATION	protein_coding	start	-	2	129	0	2.33	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000018882	Mrpl45	ENSMUST00000019026	ENSMUSP00000019026	TRANSLATION	protein_coding	-	CCDS25318.1	1	306	0	7.08	7.5	109.7	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000041961	Znrf3	ENSMUST00000109867	ENSMUSP00000105493	TRANSLATION	protein_coding	-	CCDS36102.1	5	913	8	5.63	0.5	45.6	1	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000041961	Znrf3	ENSMUST00000172492	ENSMUSP00000134698	TRANSLATION	protein_coding	-	CCDS70134.1	1	809	8	4.63	1.5	45.6	1	-4,-5	-	-	16.002	MINOR
ENSMUSG00000041961	Znrf3	ENSMUST00000143746	ENSMUSP00000122475	TRANSLATION	protein_coding	-	-	1	239	0	3.75	0	0	0	-1,-4	-	-	2.238	MINOR
ENSMUSG00000002057	Foxn1	ENSMUST00000108294	ENSMUSP00000103929	TRANSLATION	protein_coding	-	CCDS25102.1	1	648	0	2	2.9	109.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062128	Olfr20	ENSMUST00000108465	ENSMUSP00000104105	TRANSLATION	protein_coding	-	CCDS25006.1	-	314	0	0.42	5.1	206.1	4	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062128	Olfr20	ENSMUST00000120137	ENSMUSP00000114110	TRANSLATION	protein_coding	-	CCDS25006.1	2	314	0	0.42	5.1	206.1	4	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038335	Tsr1	ENSMUST00000045807	ENSMUSP00000039027	TRANSLATION	protein_coding	-	CCDS36225.1	1	803	0	7.712	5.3	501.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000038335	Tsr1	ENSMUST00000128230	ENSMUSP00000121384	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	0.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038335	Tsr1	ENSMUST00000155785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038335	Tsr1	ENSMUST00000144019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038335	Tsr1	ENSMUST00000155702	ENSMUSP00000119868	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038335	Tsr1	ENSMUST00000130910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038335	Tsr1	ENSMUST00000153316	ENSMUSP00000114183	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020473	Aebp1	ENSMUST00000109829	ENSMUSP00000105454	TRANSLATION	protein_coding	-	-	1	748	0	8.18	0	385	0	-4,-6	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000020473	Aebp1	ENSMUST00000102923	ENSMUSP00000099987	TRANSLATION	protein_coding	-	CCDS24406.1	1	1128	0	8.28	0.5	385	0	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000020473	Aebp1	ENSMUST00000138103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078257	2300003K06Rik	ENSMUST00000105054	ENSMUSP00000100675	TRANSLATION	protein_coding	-	CCDS70307.1	-	262	0	0	0.5	80.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033983	Coil	ENSMUST00000140549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033983	Coil	ENSMUST00000107898	ENSMUSP00000103530	TRANSLATION	protein_coding	-	-	5	570	0	0	0.5	109.7	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000033983	Coil	ENSMUST00000036649	ENSMUSP00000047588	TRANSLATION	protein_coding	-	CCDS36277.1	1	573	0	0	0.5	109.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000040919	4930505A04Rik	ENSMUST00000041763	ENSMUSP00000045288	TRANSLATION	protein_coding	-	CCDS48764.1	2	233	0	0	1.5	299.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040919	4930505A04Rik	ENSMUST00000152718	ENSMUSP00000117004	TRANSLATION	nonsense_mediated_decay	-	-	2	105	0	0	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017400	Stac2	ENSMUST00000131519	ENSMUSP00000118164	TRANSLATION	protein_coding	start/stop	-	5	183	2	0.75	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017400	Stac2	ENSMUST00000017544	ENSMUSP00000017544	TRANSLATION	protein_coding	-	CCDS25338.1	1	408	8	3.99	8.8	235.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020363	Gfpt2	ENSMUST00000130129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020363	Gfpt2	ENSMUST00000020629	ENSMUSP00000020629	TRANSLATION	protein_coding	-	CCDS24622.1	1	682	36	12.33	10.4	221.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000069816	Olfr23	ENSMUST00000092917	ENSMUSP00000090596	TRANSLATION	protein_coding	-	CCDS36221.1	-	325	0	0.36	0.5	201.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069816	Olfr23	ENSMUST00000214210	ENSMUSP00000150593	TRANSLATION	protein_coding	-	CCDS36221.1	5	325	0	0.36	0.5	201.1	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101874	Olfr1391	ENSMUST00000215671	ENSMUSP00000150635	TRANSLATION	protein_coding	-	CCDS24606.1	5	311	0	0.28	6.3	152.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000101874	Olfr1391	ENSMUST00000187509	ENSMUSP00000140343	TRANSLATION	protein_coding	-	CCDS24606.1	-	311	0	0.28	6.3	152.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000016984	Etaa1	ENSMUST00000076661	ENSMUSP00000075957	TRANSLATION	protein_coding	-	CCDS24452.1	1	877	0	0	0.5	1078.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051232	Tmem199	ENSMUST00000132433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051232	Tmem199	ENSMUST00000052566	ENSMUSP00000058599	TRANSLATION	protein_coding	-	CCDS25108.1	1	208	0	0	6.3	91.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000051232	Tmem199	ENSMUST00000148393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051232	Tmem199	ENSMUST00000135946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020936	Nmt1	ENSMUST00000021314	ENSMUSP00000021314	TRANSLATION	protein_coding	-	CCDS25511.1	1	496	36	11.33	7.5	527.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020936	Nmt1	ENSMUST00000148795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020936	Nmt1	ENSMUST00000135332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020872	Tac4	ENSMUST00000021242	ENSMUSP00000021242	TRANSLATION	protein_coding	-	CCDS25274.1	1	128	0	0	0.5	0	0	2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000055415	Atp10b	ENSMUST00000077659	ENSMUSP00000076844	TRANSLATION	protein_coding	-	CCDS36129.1	5	1474	6	0	1.5	384.3	9	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000055415	Atp10b	ENSMUST00000148911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055415	Atp10b	ENSMUST00000238415	ENSMUSP00000158770	TRANSLATION	protein_coding	-	-	-	1446	6	0	0.5	377.9	10	-4,-5	-	-	11.616	ALTERNATIVE:2
ENSMUSG00000020814	Mxra7	ENSMUST00000047715	ENSMUSP00000038213	TRANSLATION	protein_coding	-	CCDS83937.1	1	151	0	0	0.5	0	0	0,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000020814	Mxra7	ENSMUST00000021170	ENSMUSP00000021170	TRANSLATION	protein_coding	-	CCDS25677.1	1	178	0	0	0.5	0	0	0,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000020814	Mxra7	ENSMUST00000150015	ENSMUSP00000134412	TRANSLATION	nonsense_mediated_decay	-	-	3	151	0	0	0.5	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000001755	Coasy	ENSMUST00000151056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001755	Coasy	ENSMUST00000151686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001755	Coasy	ENSMUST00000107308	ENSMUSP00000102929	TRANSLATION	protein_coding	-	CCDS25446.1	1	563	26	6.89	3.9	179.9	0	3,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000001755	Coasy	ENSMUST00000001806	ENSMUSP00000001806	TRANSLATION	protein_coding	-	CCDS25446.1	1	563	26	6.89	3.9	179.9	0	3,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000070327	Rnf213	ENSMUST00000172235	ENSMUSP00000130027	TRANSLATION	protein_coding	-	-	5	312	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000070327	Rnf213	ENSMUST00000093902	ENSMUSP00000091429	TRANSLATION	protein_coding	-	-	5	5152	6	0	0	0	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000070327	Rnf213	ENSMUST00000131035	ENSMUSP00000115063	TRANSLATION	protein_coding	-	-	5	5151	6	0	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000000982	Ccl3	ENSMUST00000001008	ENSMUSP00000001008	TRANSLATION	protein_coding	-	CCDS36255.1	1	92	0	1.9	6.3	76.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000050910	Cdr2l	ENSMUST00000053288	ENSMUSP00000052096	TRANSLATION	protein_coding	-	CCDS36371.1	1	465	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000110344	Gm45716	ENSMUST00000153734	ENSMUSP00000148024	TRANSLATION	protein_coding,RT	-	-	5	93	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000110344	Gm45716	ENSMUST00000124877	ENSMUSP00000147478	TRANSLATION	protein_coding	-	-	1	93	0	0	0	0	1	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000110344	Gm45716	ENSMUST00000134929	ENSMUSP00000147615	TRANSLATION	protein_coding,RT	-	-	1	93	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000057778	Cyb5d2	ENSMUST00000079681	ENSMUSP00000078623	TRANSLATION	protein_coding	-	CCDS24990.2	1	263	0	1.4	1.5	40.2	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000057778	Cyb5d2	ENSMUST00000156294	ENSMUSP00000131961	TRANSLATION	protein_coding	-	-	1	110	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000057778	Cyb5d2	ENSMUST00000169476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057778	Cyb5d2	ENSMUST00000141141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010122	Slc47a1	ENSMUST00000010267	ENSMUSP00000010267	TRANSLATION	protein_coding	-	CCDS24811.2	2	567	0	7.81	3.9	0	17	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000010122	Slc47a1	ENSMUST00000147583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010122	Slc47a1	ENSMUST00000148671	ENSMUSP00000118265	TRANSLATION	protein_coding	stop	-	5	214	0	3.32	0	0	9	-1,-5	-	-	-1	MINOR
ENSMUSG00000010122	Slc47a1	ENSMUST00000131723	ENSMUSP00000115132	TRANSLATION	nonsense_mediated_decay	-	-	2	184	0	2.64	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000001054	Rmnd5b	ENSMUST00000136020	ENSMUSP00000120636	TRANSLATION	nonsense_mediated_decay	-	-	5	242	0	0	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001054	Rmnd5b	ENSMUST00000132854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001054	Rmnd5b	ENSMUST00000001081	ENSMUSP00000001081	TRANSLATION	protein_coding	-	CCDS24656.1	1	393	4	0	10.8	139.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000001054	Rmnd5b	ENSMUST00000147009	ENSMUSP00000118594	TRANSLATION	protein_coding	start	-	3	185	4	0	0	58.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043448	Gjc2	ENSMUST00000108793	ENSMUSP00000104421	TRANSLATION	protein_coding	-	CCDS24760.1	1	440	0	0.3	1.5	328.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043448	Gjc2	ENSMUST00000108790	ENSMUSP00000104418	TRANSLATION	protein_coding	-	CCDS24760.1	1	440	0	0.3	1.5	328.2	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000018900	Slc22a5	ENSMUST00000152084	ENSMUSP00000115474	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018900	Slc22a5	ENSMUST00000019044	ENSMUSP00000019044	TRANSLATION	protein_coding	-	CCDS24687.1	1	557	0	4.4	5.1	93.6	11	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000018900	Slc22a5	ENSMUST00000136307	ENSMUSP00000118900	TRANSLATION	nonsense_mediated_decay	-	-	2	146	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000020719	Ddx5	ENSMUST00000123339	ENSMUSP00000121733	TRANSLATION	protein_coding	stop	-	5	167	13	3.55	0	36	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020719	Ddx5	ENSMUST00000106778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020719	Ddx5	ENSMUST00000151741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020719	Ddx5	ENSMUST00000129585	ENSMUSP00000116859	TRANSLATION	protein_coding	stop	-	3	182	14	4.05	0	58.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020719	Ddx5	ENSMUST00000021062	ENSMUSP00000021062	TRANSLATION	protein_coding	-	CCDS25562.1	1	615	21	10.35	8.8	388.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000020719	Ddx5	ENSMUST00000130172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020719	Ddx5	ENSMUST00000133426	ENSMUSP00000138237	TRANSLATION	nonsense_mediated_decay	-	-	1	406	21	9.35	0	216.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020719	Ddx5	ENSMUST00000106779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020719	Ddx5	ENSMUST00000127481	ENSMUSP00000138184	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020804	Aanat	ENSMUST00000142978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020804	Aanat	ENSMUST00000021160	ENSMUSP00000021160	TRANSLATION	nonsense_mediated_decay	-	-	1	105	1	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020804	Aanat	ENSMUST00000153476	ENSMUSP00000122895	TRANSLATION	protein_coding	-	CCDS25671.1	1	205	24	3	1.5	52.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020804	Aanat	ENSMUST00000132601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020804	Aanat	ENSMUST00000123507	ENSMUSP00000115999	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056752	Dnah9	ENSMUST00000136124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056752	Dnah9	ENSMUST00000080665	ENSMUSP00000079494	TRANSLATION	protein_coding	-	CCDS36182.1	5	4484	65	32.11	1.5	4396.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056752	Dnah9	ENSMUST00000108691	ENSMUSP00000104331	TRANSLATION	protein_coding	-	-	1	457	0	0	0	416.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056752	Dnah9	ENSMUST00000152386	ENSMUSP00000116499	TRANSLATION	protein_coding	start	-	5	1958	32	19.11	0	2701.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056752	Dnah9	ENSMUST00000142836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056752	Dnah9	ENSMUST00000130739	ENSMUSP00000116227	TRANSLATION	protein_coding	start/stop	-	5	279	0	3	0	432.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059610	Olfr222	ENSMUST00000214351	ENSMUSP00000149821	TRANSLATION	protein_coding	-	CCDS24772.1	5	318	0	0.36	5.1	182.6	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059610	Olfr222	ENSMUST00000215339	ENSMUSP00000149533	TRANSLATION	protein_coding	-	CCDS24772.1	5	318	0	0.36	5.1	182.6	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059610	Olfr222	ENSMUST00000071943	ENSMUSP00000071835	TRANSLATION	protein_coding	-	CCDS24772.1	-	318	0	0.36	5.1	182.6	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000023781	Hes7	ENSMUST00000024543	ENSMUSP00000024543	TRANSLATION	protein_coding	-	CCDS24883.1	1	225	0	2	2.7	44.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020527	Myo19	ENSMUST00000141705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020527	Myo19	ENSMUST00000124152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020527	Myo19	ENSMUST00000124475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020527	Myo19	ENSMUST00000141173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020527	Myo19	ENSMUST00000093969	ENSMUSP00000091502	TRANSLATION	protein_coding	-	CCDS48871.1	5	963	16	15.26	1.5	660.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020527	Myo19	ENSMUST00000020837	ENSMUSP00000020837	TRANSLATION	protein_coding	-	-	1	206	12	2.88	0	134.8	0	-4,-5	-	-	3.336	MINOR
ENSMUSG00000020527	Myo19	ENSMUST00000123515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053838	Nudcd3	ENSMUST00000066496	ENSMUSP00000064668	TRANSLATION	protein_coding	-	CCDS24412.1	1	363	0	2.8	0.5	136.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053838	Nudcd3	ENSMUST00000140700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053838	Nudcd3	ENSMUST00000135631	ENSMUSP00000123108	TRANSLATION	protein_coding	start	-	3	251	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053838	Nudcd3	ENSMUST00000109805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019461	Plscr3	ENSMUST00000152566	ENSMUSP00000123549	TRANSLATION	protein_coding	stop	-	3	224	0	0.52	0	181.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019461	Plscr3	ENSMUST00000108633	ENSMUSP00000104273	TRANSLATION	protein_coding	-	CCDS24916.1	1	296	0	0.52	5.1	285.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000019461	Plscr3	ENSMUST00000019605	ENSMUSP00000019605	TRANSLATION	protein_coding	-	CCDS24916.1	1	296	0	0.52	5.1	285.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000019461	Plscr3	ENSMUST00000108632	ENSMUSP00000104272	TRANSLATION	protein_coding	-	CCDS24916.1	1	296	0	0.52	5.1	285.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000040543	Pitpnm3	ENSMUST00000132781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040543	Pitpnm3	ENSMUST00000142471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040543	Pitpnm3	ENSMUST00000134210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040543	Pitpnm3	ENSMUST00000075258	ENSMUSP00000074737	TRANSLATION	protein_coding	-	CCDS24978.1	1	974	7	0	2.9	147.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000040543	Pitpnm3	ENSMUST00000108508	ENSMUSP00000104148	TRANSLATION	protein_coding	-	CCDS36213.1	1	958	7	0	1.7	147.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000020777	Acox1	ENSMUST00000128793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020777	Acox1	ENSMUST00000130229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020777	Acox1	ENSMUST00000066587	ENSMUSP00000063325	TRANSLATION	protein_coding	-	CCDS25660.1	1	661	32	13.5	5.3	385	0	-4,-5	-	-	19.622	PRINCIPAL:3
ENSMUSG00000020777	Acox1	ENSMUST00000072948	ENSMUSP00000072717	TRANSLATION	protein_coding	-	CCDS70354.1	1	661	32	13.5	6.3	380.2	0	-4,-5	-	-	19.712	ALTERNATIVE:1
ENSMUSG00000020777	Acox1	ENSMUST00000148601	ENSMUSP00000122185	TRANSLATION	protein_coding	start	-	2	625	32	11.5	0	304.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020777	Acox1	ENSMUST00000150549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020777	Acox1	ENSMUST00000124684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040904	Gm21988	ENSMUST00000176116	ENSMUSP00000135134	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	71	0	0	0	0	1	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000040904	Gm21988	ENSMUST00000176268	ENSMUSP00000135088	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	98	0	0	12.7	0	2	-1,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000020893	Per1	ENSMUST00000142392	ENSMUSP00000121713	TRANSLATION	nonsense_mediated_decay	-	-	5	572	0	8	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020893	Per1	ENSMUST00000101004	ENSMUSP00000098566	TRANSLATION	protein_coding	-	-	1	827	0	8	0	43.9	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000020893	Per1	ENSMUST00000102605	ENSMUSP00000099665	TRANSLATION	protein_coding	-	-	1	1271	0	9.25	0	299.2	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000020893	Per1	ENSMUST00000132462	ENSMUSP00000122164	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020893	Per1	ENSMUST00000021271	ENSMUSP00000021271	TRANSLATION	protein_coding	-	CCDS24882.1	1	1291	0	10	0.5	299.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020893	Per1	ENSMUST00000166748	ENSMUSP00000132635	TRANSLATION	protein_coding	-	CCDS24882.1	1	1291	0	10	0.5	299.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025583	Rptor	ENSMUST00000148860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000127899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000139728	ENSMUSP00000124886	TRANSLATION	nonsense_mediated_decay	start	-	3	89	0	2.198	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025583	Rptor	ENSMUST00000126802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000130049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000131217	ENSMUSP00000125667	TRANSLATION	nonsense_mediated_decay	start	-	5	102	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025583	Rptor	ENSMUST00000136662	ENSMUSP00000125293	TRANSLATION	nonsense_mediated_decay	start	-	2	264	0	5.41	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025583	Rptor	ENSMUST00000147781	ENSMUSP00000124366	TRANSLATION	nonsense_mediated_decay	-	-	1	387	0	8.698	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025583	Rptor	ENSMUST00000124401	ENSMUSP00000125503	TRANSLATION	protein_coding	start/stop	-	5	171	0	3.83	0	30.7	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025583	Rptor	ENSMUST00000125583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000147772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025583	Rptor	ENSMUST00000026671	ENSMUSP00000026671	TRANSLATION	protein_coding	-	CCDS25720.1	1	1335	0	32.74	9.5	35.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000063386	Olfr1387	ENSMUST00000073824	ENSMUSP00000073494	TRANSLATION	protein_coding	-	CCDS24610.1	-	311	0	0	5.1	167.9	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000063386	Olfr1387	ENSMUST00000214541	ENSMUSP00000151105	TRANSLATION	protein_coding	-	CCDS24610.1	5	311	0	0	5.1	167.9	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000048277	Syngr2	ENSMUST00000177241	ENSMUSP00000135171	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048277	Syngr2	ENSMUST00000175737	ENSMUSP00000134879	TRANSLATION	protein_coding	start	-	3	147	0	0	0	43.5	5	-3,-1	-	-	-1	MINOR
ENSMUSG00000048277	Syngr2	ENSMUST00000120928	ENSMUSP00000113941	TRANSLATION	protein_coding	-	-	2	194	0	0	0	58.6	6	-4,-2	-	-	4.446	MINOR
ENSMUSG00000048277	Syngr2	ENSMUST00000026649	ENSMUSP00000026649	TRANSLATION	protein_coding	-	CCDS25691.1	1	224	0	0	4.1	78.2	8	-4,-7	-	-	6.934	PRINCIPAL:2
ENSMUSG00000048277	Syngr2	ENSMUST00000176936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048277	Syngr2	ENSMUST00000143852	ENSMUSP00000135529	TRANSLATION	protein_coding	stop	-	1	119	0	0	0	57.7	5	0,-3	-	-	-1	MINOR
ENSMUSG00000048277	Syngr2	ENSMUST00000177131	ENSMUSP00000134789	TRANSLATION	protein_coding	-	-	3	177	0	0	0	79.1	8	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000089669	Tnfsf13	ENSMUST00000018896	ENSMUSP00000018896	TRANSLATION	protein_coding	-	CCDS48827.1	1	240	0	3.8	1.5	43.6	1	-2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000089669	Tnfsf13	ENSMUST00000108648	ENSMUSP00000104288	TRANSLATION	protein_coding	-	-	5	224	0	3.3	1	43.6	1	-2,-3	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000001558	Klhl10	ENSMUST00000001599	ENSMUSP00000001599	TRANSLATION	protein_coding	-	CCDS25423.1	1	608	0	3.6	7.5	474	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000001558	Klhl10	ENSMUST00000107395	ENSMUSP00000103018	TRANSLATION	protein_coding	-	-	1	270	0	1.6	0	198.3	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000004043	Stat5a	ENSMUST00000138083	ENSMUSP00000120039	TRANSLATION	protein_coding	stop	-	2	125	0	2.4	0	162.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004043	Stat5a	ENSMUST00000154087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004043	Stat5a	ENSMUST00000133036	ENSMUSP00000117204	TRANSLATION	protein_coding	stop	-	3	51	0	1	0	78.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004043	Stat5a	ENSMUST00000004145	ENSMUSP00000004145	TRANSLATION	protein_coding	-	CCDS25439.1	1	793	0	15.25	6.3	720.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000004043	Stat5a	ENSMUST00000107357	ENSMUSP00000102980	TRANSLATION	protein_coding	-	CCDS48933.1	1	797	0	14.55	0.5	720.9	0	-4,-7	-	-	10.602	MINOR
ENSMUSG00000004043	Stat5a	ENSMUST00000135272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004043	Stat5a	ENSMUST00000107356	ENSMUSP00000102979	TRANSLATION	protein_coding	-	CCDS25439.1	1	793	0	15.25	6.3	720.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020428	Gabra6	ENSMUST00000109286	ENSMUSP00000104909	TRANSLATION	protein_coding	-	-	5	452	6	6.28	0.5	284	4	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020428	Gabra6	ENSMUST00000155218	ENSMUSP00000126114	TRANSLATION	protein_coding	-	CCDS48769.1	1	453	6	6.28	0.5	284	4	4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000020428	Gabra6	ENSMUST00000020703	ENSMUSP00000020703	TRANSLATION	protein_coding	-	CCDS24554.1	1	443	6	5.95	0.5	252.6	4	4,-1	-	-	15.456	MINOR
ENSMUSG00000078605	E030025P04Rik	ENSMUST00000106710	ENSMUSP00000102321	TRANSLATION	protein_coding	-	-	1	185	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020309	Chac2	ENSMUST00000101394	ENSMUSP00000098942	TRANSLATION	protein_coding	-	CCDS24510.1	1	178	0	1.11	1.5	228.3	0	-4,-5	-	-	10.896	PRINCIPAL:1
ENSMUSG00000020309	Chac2	ENSMUST00000020553	ENSMUSP00000020553	TRANSLATION	protein_coding	-	CCDS70154.1	1	166	0	1.36	1.5	188.4	0	-4,-6	-	-	9.606	MINOR
ENSMUSG00000035007	Rundc1	ENSMUST00000040561	ENSMUSP00000042151	TRANSLATION	protein_coding	-	CCDS25469.1	1	615	0	0	2.7	114.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020270	Smim23	ENSMUST00000109365	ENSMUSP00000104989	TRANSLATION	protein_coding	-	-	5	76	0	0	0	102.6	1	-4,-7	-	-	0	MINOR
ENSMUSG00000020270	Smim23	ENSMUST00000020508	ENSMUSP00000020508	TRANSLATION	protein_coding	-	CCDS48767.1	1	136	0	0	0.5	225.4	1	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057948	Unc13d	ENSMUST00000173943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057948	Unc13d	ENSMUST00000173345	ENSMUSP00000133679	TRANSLATION	nonsense_mediated_decay	-	-	1	834	5	5.564	0	42.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057948	Unc13d	ENSMUST00000155120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057948	Unc13d	ENSMUST00000153408	ENSMUSP00000115327	TRANSLATION	protein_coding	stop	-	3	117	0	0.564	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057948	Unc13d	ENSMUST00000156545	ENSMUSP00000118266	TRANSLATION	protein_coding	stop	-	5	76	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057948	Unc13d	ENSMUST00000075036	ENSMUSP00000074549	TRANSLATION	protein_coding	-	CCDS25656.1	5	1083	15	8.604	2.9	138.2	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000057948	Unc13d	ENSMUST00000174822	ENSMUSP00000134260	TRANSLATION	protein_coding	-	CCDS25656.1	1	1083	15	8.604	2.9	138.2	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000057948	Unc13d	ENSMUST00000106451	ENSMUSP00000102059	TRANSLATION	protein_coding	-	-	5	1085	15	8.604	2.9	138.2	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000057948	Unc13d	ENSMUST00000106450	ENSMUSP00000102058	TRANSLATION	protein_coding	-	-	5	1085	15	8.604	2.9	138.2	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000051790	Nlgn2	ENSMUST00000056484	ENSMUSP00000053097	TRANSLATION	protein_coding	-	CCDS24914.1	1	836	6	7.23	1.5	641.5	1	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000051790	Nlgn2	ENSMUST00000108634	ENSMUSP00000104274	TRANSLATION	protein_coding	-	CCDS24914.1	1	836	6	7.23	1.5	641.5	1	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000051790	Nlgn2	ENSMUST00000139893	ENSMUSP00000120428	TRANSLATION	protein_coding	start/stop	-	2	262	4	4	0	371.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051790	Nlgn2	ENSMUST00000140477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038811	Gngt2	ENSMUST00000107708	ENSMUSP00000103336	TRANSLATION	protein_coding	-	CCDS25284.1	2	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000107711	ENSMUSP00000103339	TRANSLATION	protein_coding	-	CCDS25284.1	2	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000107709	ENSMUSP00000103337	TRANSLATION	protein_coding	-	CCDS25284.1	2	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000100532	ENSMUSP00000098101	TRANSLATION	protein_coding	-	CCDS25284.1	1	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000036088	ENSMUSP00000047586	TRANSLATION	protein_coding	-	CCDS25284.1	1	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000107712	ENSMUSP00000103340	TRANSLATION	protein_coding	-	CCDS25284.1	2	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038811	Gngt2	ENSMUST00000107714	ENSMUSP00000103342	TRANSLATION	protein_coding	-	CCDS25284.1	3	69	0	1.75	16.2	51.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000690	Hoxb6	ENSMUST00000000704	ENSMUSP00000000704	TRANSLATION	protein_coding	-	CCDS25295.1	1	224	0	1	11	75.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000000690	Hoxb6	ENSMUST00000173432	ENSMUSP00000133281	TRANSLATION	protein_coding	-	CCDS25295.1	5	224	0	1	11	75.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000017715	Pgs1	ENSMUST00000155507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017715	Pgs1	ENSMUST00000100185	ENSMUSP00000097760	TRANSLATION	nonsense_mediated_decay	-	-	1	347	0	1.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017715	Pgs1	ENSMUST00000132676	ENSMUSP00000121973	TRANSLATION	protein_coding	-	CCDS25698.1	1	553	0	2.64	2.7	0	0	0,1	-	-	6	PRINCIPAL:1
ENSMUSG00000017715	Pgs1	ENSMUST00000017859	ENSMUSP00000017859	TRANSLATION	nonsense_mediated_decay	start	-	1	476	0	1.82	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000020411	Nipal4	ENSMUST00000020679	ENSMUSP00000020679	TRANSLATION	protein_coding	-	CCDS24572.1	1	406	0	0	2.7	398.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020697	Lig3	ENSMUST00000172609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020697	Lig3	ENSMUST00000092849	ENSMUSP00000090525	TRANSLATION	protein_coding	-	CCDS25147.1	1	1012	21	17.2	0.5	561.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000020697	Lig3	ENSMUST00000154887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020697	Lig3	ENSMUST00000131537	ENSMUSP00000133672	TRANSLATION	protein_coding	-	-	1	431	4	5.55	0	188.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020697	Lig3	ENSMUST00000173727	ENSMUSP00000133849	TRANSLATION	protein_coding	-	CCDS70266.1	1	1011	21	17.2	0.5	561.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020697	Lig3	ENSMUST00000173009	ENSMUSP00000133348	TRANSLATION	protein_coding	-	-	1	431	4	5.55	0	188.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020697	Lig3	ENSMUST00000080461	ENSMUSP00000079317	TRANSLATION	protein_coding	-	-	5	953	21	15.45	0	471.3	0	-4,-7	-	-	9.066	MINOR
ENSMUSG00000020697	Lig3	ENSMUST00000172837	ENSMUSP00000134101	TRANSLATION	protein_coding	start	-	3	174	0	1.9	0	64.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020697	Lig3	ENSMUST00000173347	ENSMUSP00000134300	TRANSLATION	protein_coding	-	CCDS70266.1	1	1011	21	17.2	0.5	561.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020697	Lig3	ENSMUST00000155818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020697	Lig3	ENSMUST00000021039	ENSMUSP00000021039	TRANSLATION	protein_coding	-	-	5	1016	21	17.2	0.5	560.8	0	-4,-7	-	-	17.934	ALTERNATIVE:2
ENSMUSG00000020697	Lig3	ENSMUST00000173722	ENSMUSP00000133805	TRANSLATION	protein_coding	-	CCDS25147.1	5	1012	21	17.2	0.5	561.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000018167	Stard3	ENSMUST00000148738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018167	Stard3	ENSMUST00000143243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018167	Stard3	ENSMUST00000130323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018167	Stard3	ENSMUST00000155063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018167	Stard3	ENSMUST00000018311	ENSMUSP00000018311	TRANSLATION	protein_coding	-	CCDS25345.1	1	446	0	7	7.5	390.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000018167	Stard3	ENSMUST00000154960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018167	Stard3	ENSMUST00000152559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097328	Tnfsf12	ENSMUST00000181810	ENSMUSP00000137972	TRANSLATION	protein_coding	-	CCDS24907.1	1	249	0	3.25	6.4	55.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000097328	Tnfsf12	ENSMUST00000181261	ENSMUSP00000137916	TRANSLATION	protein_coding	stop	-	3	98	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039364	Sectm1b	ENSMUST00000132117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039364	Sectm1b	ENSMUST00000081499	ENSMUSP00000080217	TRANSLATION	protein_coding	-	CCDS25765.1	5	212	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000039364	Sectm1b	ENSMUST00000130786	ENSMUSP00000116010	TRANSLATION	protein_coding	stop	-	1	185	0	0	0	0	1	4,-1	-	-	-1	MINOR
ENSMUSG00000039364	Sectm1b	ENSMUST00000170381	ENSMUSP00000126486	TRANSLATION	protein_coding	-	CCDS25765.1	5	212	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000039364	Sectm1b	ENSMUST00000168459	ENSMUSP00000125965	TRANSLATION	protein_coding	-	CCDS25765.1	1	212	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000039364	Sectm1b	ENSMUST00000150577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039364	Sectm1b	ENSMUST00000039309	ENSMUSP00000045748	TRANSLATION	protein_coding	-	CCDS25765.1	1	212	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000018381	Abi3	ENSMUST00000143492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018381	Abi3	ENSMUST00000059026	ENSMUSP00000061893	TRANSLATION	protein_coding	-	CCDS25283.1	1	367	0	6.01	1.5	144.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018381	Abi3	ENSMUST00000131049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018381	Abi3	ENSMUST00000137645	ENSMUSP00000119990	TRANSLATION	protein_coding	start/stop	-	5	244	0	3.26	0	98.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078259	Gm11554	ENSMUST00000105056	ENSMUSP00000100677	TRANSLATION	protein_coding	-	CCDS48920.1	-	190	0	0	0.5	138.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075566	Krtap4-6	ENSMUST00000100476	ENSMUSP00000098045	TRANSLATION	protein_coding	-	CCDS48914.1	-	195	0	0	0.5	106.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049323	Smcr8	ENSMUST00000102667	ENSMUSP00000099728	TRANSLATION	protein_coding	-	CCDS24798.1	-	785	0	0	0.5	33.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000049323	Smcr8	ENSMUST00000056907	ENSMUSP00000055926	TRANSLATION	protein_coding	-	CCDS48814.1	1	935	0	0	2.7	32.9	0	-4,-5	-	-	5.928	ALTERNATIVE:2
ENSMUSG00000040594	Ranbp17	ENSMUST00000154808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040594	Ranbp17	ENSMUST00000207401	ENSMUSP00000147123	TRANSLATION	protein_coding	start/stop	-	5	298	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040594	Ranbp17	ENSMUST00000147751	ENSMUSP00000118519	TRANSLATION	protein_coding	stop	-	3	210	0	2.45	0	45	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040594	Ranbp17	ENSMUST00000129179	ENSMUSP00000137898	TRANSLATION	nonsense_mediated_decay	-	-	1	576	0	3.425	0.5	45	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040594	Ranbp17	ENSMUST00000102815	ENSMUSP00000099879	TRANSLATION	protein_coding	-	CCDS24534.1	1	1088	0	3.425	5.1	45	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000040594	Ranbp17	ENSMUST00000037522	ENSMUSP00000035840	TRANSLATION	protein_coding	-	-	1	516	0	3.425	0	45	0	-4,-6	-	-	12	MINOR
ENSMUSG00000013418	B4galnt2	ENSMUST00000038343	ENSMUSP00000037239	TRANSLATION	protein_coding	-	CCDS25285.1	1	510	15	0	0.5	64.6	0	-1,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070337	Gpr179	ENSMUST00000093942	ENSMUSP00000091474	TRANSLATION	protein_coding	-	CCDS36292.1	5	2293	0	2.22	0.5	141.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070337	Gpr179	ENSMUST00000162544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020695	Mrc2	ENSMUST00000021038	ENSMUSP00000021038	TRANSLATION	protein_coding	-	-	1	1053	19	9.7	0	401.9	0	0,-5	-	-	9.336	MINOR
ENSMUSG00000020695	Mrc2	ENSMUST00000151135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020695	Mrc2	ENSMUST00000142905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020695	Mrc2	ENSMUST00000100335	ENSMUSP00000097909	TRANSLATION	protein_coding	-	CCDS25539.1	1	1479	23	9.7	3.9	559.9	0	0,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020695	Mrc2	ENSMUST00000126931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063881	Olfr376	ENSMUST00000120401	ENSMUSP00000113236	TRANSLATION	protein_coding	-	CCDS25007.1	2	317	0	0.42	1.5	197.3	4	-3,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000063881	Olfr376	ENSMUST00000170592	ENSMUSP00000126073	TRANSLATION	protein_coding	-	CCDS25007.1	2	317	0	0.42	1.5	197.3	4	-3,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000063881	Olfr376	ENSMUST00000078952	ENSMUSP00000077977	TRANSLATION	protein_coding	-	CCDS48844.1	2	320	0	0.42	1.5	197.3	4	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000061984	Olfr392	ENSMUST00000118463	ENSMUSP00000113118	TRANSLATION	protein_coding	-	CCDS25017.1	2	312	0	0.42	2.7	196.8	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061984	Olfr392	ENSMUST00000144724	ENSMUSP00000123649	TRANSLATION	protein_coding	-	CCDS25017.1	2	312	0	0.42	2.7	196.8	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017309	Cd300lg	ENSMUST00000107164	ENSMUSP00000102782	TRANSLATION	protein_coding	-	CCDS48939.1	1	415	0	1.64	0.5	47.1	2	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000017309	Cd300lg	ENSMUST00000107163	ENSMUSP00000102781	TRANSLATION	protein_coding	-	CCDS48940.1	1	371	0	1.64	0.5	47.1	2	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000017309	Cd300lg	ENSMUST00000123895	ENSMUSP00000120921	TRANSLATION	protein_coding	stop	-	5	251	0	1.48	0	47.1	2	1,-3	-	-	-1	MINOR
ENSMUSG00000017309	Cd300lg	ENSMUST00000017453	ENSMUSP00000017453	TRANSLATION	protein_coding	-	CCDS25484.1	1	287	0	1.48	0.5	47.1	2	1,-3	-	-	11.412	PRINCIPAL:3
ENSMUSG00000000381	Wap	ENSMUST00000102910	ENSMUSP00000099974	TRANSLATION	protein_coding	-	CCDS24424.1	1	134	0	0	0.5	39.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000000381	Wap	ENSMUST00000141868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000381	Wap	ENSMUST00000127341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000278	Scpep1	ENSMUST00000000287	ENSMUSP00000000287	TRANSLATION	protein_coding	-	CCDS25230.1	1	452	5	6.03	3.9	326.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005267	Zfp287	ENSMUST00000149228	ENSMUSP00000114531	TRANSLATION	nonsense_mediated_decay	-	-	1	759	56	2.4	0.5	523.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005267	Zfp287	ENSMUST00000185656	ENSMUSP00000141046	TRANSLATION	protein_coding	-	CCDS24830.1	1	759	56	2.4	0.5	523.2	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000005267	Zfp287	ENSMUST00000127732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005267	Zfp287	ENSMUST00000005399	ENSMUSP00000005399	TRANSLATION	protein_coding	-	-	1	748	56	2.4	0	523.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000005267	Zfp287	ENSMUST00000150336	ENSMUSP00000121717	TRANSLATION	protein_coding	-	-	1	297	0	1.8	0	197	0	-4,-2	-	-	4.5	MINOR
ENSMUSG00000005267	Zfp287	ENSMUST00000128370	ENSMUSP00000117179	TRANSLATION	protein_coding	-	-	1	274	0	1.8	0	197	0	-4,-5	-	-	4.5	MINOR
ENSMUSG00000036860	Mrpl55	ENSMUST00000108787	ENSMUSP00000104415	TRANSLATION	protein_coding	-	CCDS78955.1	2	134	0	2.396	0.5	192	0	-1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000036860	Mrpl55	ENSMUST00000108784	ENSMUSP00000104412	TRANSLATION	protein_coding	-	CCDS78955.1	1	134	0	2.396	0.5	192	0	-1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000036860	Mrpl55	ENSMUST00000108786	ENSMUSP00000104414	TRANSLATION	protein_coding	-	CCDS78955.1	2	134	0	2.396	0.5	192	0	-1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000036860	Mrpl55	ENSMUST00000045697	ENSMUSP00000048814	TRANSLATION	protein_coding	-	CCDS24763.1	1	127	0	2.198	3.9	192	0	2,2	-	-	12.502	PRINCIPAL:3
ENSMUSG00000036860	Mrpl55	ENSMUST00000108785	ENSMUSP00000104413	TRANSLATION	protein_coding	-	CCDS24763.1	1	127	0	2.198	3.9	192	0	2,2	-	-	12.502	PRINCIPAL:3
ENSMUSG00000004394	Tmed4	ENSMUST00000004508	ENSMUSP00000004508	TRANSLATION	protein_coding	-	CCDS24415.1	1	227	0	0.825	3.9	178.2	2	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000004394	Tmed4	ENSMUST00000130621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004394	Tmed4	ENSMUST00000132147	ENSMUSP00000121643	TRANSLATION	protein_coding	stop	-	5	170	0	0.825	0	86.3	1	1,-2	-	-	-1	MINOR
ENSMUSG00000019301	Hsd17b1	ENSMUST00000019445	ENSMUSP00000019445	TRANSLATION	protein_coding	-	CCDS25445.1	1	344	28	5.8	1.5	124	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000018405	Mrm1	ENSMUST00000144104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018405	Mrm1	ENSMUST00000018549	ENSMUSP00000018549	TRANSLATION	protein_coding	-	CCDS36260.1	1	320	18	2.21	1.5	153.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000018405	Mrm1	ENSMUST00000139076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000238653	ENSMUSP00000158687	TRANSLATION	protein_coding	-	CCDS24979.1	-	959	0	0	1.5	1641.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000131546	ENSMUSP00000122273	TRANSLATION	nonsense_mediated_decay	-	-	1	661	0	0	0	1107.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000108505	ENSMUSP00000104145	TRANSLATION	protein_coding	-	-	1	309	0	0	0	455.2	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000151411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000144553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000154093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000142530	ENSMUSP00000115276	TRANSLATION	nonsense_mediated_decay	-	-	1	366	0	0	0	680.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020807	4933427D14Rik	ENSMUST00000156696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025145	Lrrc45	ENSMUST00000151852	ENSMUSP00000115298	TRANSLATION	protein_coding	stop	-	5	162	0	2.95	0	34.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025145	Lrrc45	ENSMUST00000155187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025145	Lrrc45	ENSMUST00000026139	ENSMUSP00000026139	TRANSLATION	protein_coding	-	CCDS25753.1	1	670	0	4.45	7.5	56.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025145	Lrrc45	ENSMUST00000145781	ENSMUSP00000123038	TRANSLATION	nonsense_mediated_decay	-	-	5	423	0	4.45	0	56.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025145	Lrrc45	ENSMUST00000150225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001440	Kpnb1	ENSMUST00000153727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001440	Kpnb1	ENSMUST00000001479	ENSMUSP00000001479	TRANSLATION	protein_coding	-	CCDS25316.1	1	876	0	19.25	15.5	86.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001440	Kpnb1	ENSMUST00000132633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000156378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000125064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000126565	ENSMUSP00000118820	TRANSLATION	protein_coding	stop	-	5	90	0	0	0	174.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017210	Med24	ENSMUST00000141566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017210	Med24	ENSMUST00000144720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000100500	ENSMUSP00000098069	TRANSLATION	protein_coding	-	-	5	1006	0	0	1.5	1309	0	-4,-7	-	-	4.428	MINOR
ENSMUSG00000017210	Med24	ENSMUST00000139849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017210	Med24	ENSMUST00000017354	ENSMUSP00000017354	TRANSLATION	protein_coding	-	CCDS25361.2	1	987	0	0	2.8	1335.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000017210	Med24	ENSMUST00000124371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000144048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000137328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017210	Med24	ENSMUST00000138750	ENSMUSP00000120002	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	72.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000144503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000179180	ENSMUSP00000137096	TRANSLATION	protein_coding	start/stop	-	5	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000125773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000109511	ENSMUSP00000105137	TRANSLATION	protein_coding	-	-	1	163	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000144841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000153834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000125987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032985	5730522E02Rik	ENSMUST00000135168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037935	Smarce1	ENSMUST00000128707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037935	Smarce1	ENSMUST00000155062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037935	Smarce1	ENSMUST00000156160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037935	Smarce1	ENSMUST00000128215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037935	Smarce1	ENSMUST00000103133	ENSMUSP00000099422	TRANSLATION	protein_coding	-	CCDS25374.1	1	411	0	1.65	12.5	65.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000037935	Smarce1	ENSMUST00000135040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020686	Gas2l2	ENSMUST00000147301	ENSMUSP00000119454	TRANSLATION	nonsense_mediated_decay	-	-	5	213	0	0	0	62	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020686	Gas2l2	ENSMUST00000052521	ENSMUSP00000051907	TRANSLATION	protein_coding	-	CCDS25164.1	1	860	4	1.75	0.5	171.8	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000018068	Ints2	ENSMUST00000134828	ENSMUSP00000135300	TRANSLATION	nonsense_mediated_decay	start	-	3	67	0	0	0	48.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018068	Ints2	ENSMUST00000146421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018068	Ints2	ENSMUST00000108039	ENSMUSP00000103674	TRANSLATION	protein_coding	-	CCDS25198.1	1	1198	0	0	6.3	1587.1	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000018068	Ints2	ENSMUST00000136469	ENSMUSP00000116633	TRANSLATION	protein_coding	stop	-	2	97	0	0	0	101.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018068	Ints2	ENSMUST00000130614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018068	Ints2	ENSMUST00000132024	ENSMUSP00000114859	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	162.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018068	Ints2	ENSMUST00000139285	ENSMUSP00000119084	TRANSLATION	protein_coding	stop	-	3	189	0	0	0	232.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018068	Ints2	ENSMUST00000018212	ENSMUSP00000018212	TRANSLATION	protein_coding	-	CCDS25198.1	1	1198	0	0	6.3	1587.1	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000018068	Ints2	ENSMUST00000141756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018068	Ints2	ENSMUST00000127745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018068	Ints2	ENSMUST00000134883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002064	Sdf2	ENSMUST00000002133	ENSMUSP00000002133	TRANSLATION	protein_coding	-	CCDS25096.2	1	219	0	2.8	1.5	45.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002064	Sdf2	ENSMUST00000154080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002064	Sdf2	ENSMUST00000133020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037001	Zfp39	ENSMUST00000102703	ENSMUSP00000099764	TRANSLATION	protein_coding	-	CCDS24752.1	1	718	54	1.4	1.5	306.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006930	Hap1	ENSMUST00000173630	ENSMUSP00000134050	TRANSLATION	protein_coding	start/stop	-	3	326	0	0	0	148.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006930	Hap1	ENSMUST00000146878	ENSMUSP00000134625	TRANSLATION	protein_coding	stop	-	5	181	0	0	0	208.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006930	Hap1	ENSMUST00000103124	ENSMUSP00000099413	TRANSLATION	protein_coding	-	CCDS25419.1	1	598	0	0	1.5	353.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000006930	Hap1	ENSMUST00000138603	ENSMUSP00000133356	TRANSLATION	protein_coding	-	CCDS56806.1	5	628	0	0	1.5	353.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000006930	Hap1	ENSMUST00000174635	ENSMUSP00000133831	TRANSLATION	protein_coding	start/stop	-	3	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001494	Sost	ENSMUST00000001534	ENSMUSP00000001534	TRANSLATION	protein_coding	-	CCDS25481.1	1	211	0	2	3.9	325.8	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000048217	Nags	ENSMUST00000129799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048217	Nags	ENSMUST00000055409	ENSMUSP00000050258	TRANSLATION	protein_coding	-	CCDS25488.1	1	527	5	4.9	1.5	161.4	0	-2,2	-	-	17	PRINCIPAL:1
ENSMUSG00000048217	Nags	ENSMUST00000147252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017830	Dhx58	ENSMUST00000017974	ENSMUSP00000017974	TRANSLATION	protein_coding	-	CCDS25431.1	1	678	14	11.8	3.9	239.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000017830	Dhx58	ENSMUST00000126167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017830	Dhx58	ENSMUST00000132930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017830	Dhx58	ENSMUST00000140543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017830	Dhx58	ENSMUST00000149869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017830	Dhx58	ENSMUST00000150656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020828	Pld2	ENSMUST00000179806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020828	Pld2	ENSMUST00000157075	ENSMUSP00000137247	TRANSLATION	protein_coding	stop	-	2	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020828	Pld2	ENSMUST00000108556	ENSMUSP00000104196	TRANSLATION	protein_coding	-	CCDS78980.1	1	337	11	0	0.5	97.9	0	-4,-5	-	-	6.252	MINOR
ENSMUSG00000020828	Pld2	ENSMUST00000130678	ENSMUSP00000136566	TRANSLATION	protein_coding	start	-	5	132	1	0	0	32.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020828	Pld2	ENSMUST00000146248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020828	Pld2	ENSMUST00000018429	ENSMUSP00000018429	TRANSLATION	protein_coding	-	CCDS24953.1	1	933	14	0	2.7	160.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020828	Pld2	ENSMUST00000108557	ENSMUSP00000104197	TRANSLATION	protein_coding	-	CCDS78979.1	1	944	14	0	0.5	159.4	0	-4,-5	-	-	11.94	ALTERNATIVE:2
ENSMUSG00000000804	Usp32	ENSMUST00000108075	ENSMUSP00000103710	TRANSLATION	protein_coding	-	CCDS36264.1	2	1604	2	11.8	2.9	429.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000804	Usp32	ENSMUST00000172515	ENSMUSP00000133781	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000804	Usp32	ENSMUST00000173271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000804	Usp32	ENSMUST00000172950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000804	Usp32	ENSMUST00000174809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000804	Usp32	ENSMUST00000173156	ENSMUSP00000133531	TRANSLATION	protein_coding	start	-	3	174	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000804	Usp32	ENSMUST00000172595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000804	Usp32	ENSMUST00000174602	ENSMUSP00000134476	TRANSLATION	protein_coding	start/stop	-	3	257	0	1.71	0	106.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000804	Usp32	ENSMUST00000000821	ENSMUSP00000000821	TRANSLATION	nonsense_mediated_decay	start	-	5	287	2	4.95	0	170.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020899	Pfas	ENSMUST00000172915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020899	Pfas	ENSMUST00000146490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020899	Pfas	ENSMUST00000021282	ENSMUSP00000021282	TRANSLATION	protein_coding	-	CCDS48823.1	5	1337	7	18.475	5.1	442.5	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000020899	Pfas	ENSMUST00000152964	ENSMUSP00000121808	TRANSLATION	protein_coding	start	-	3	473	5	5.06	0	356.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020899	Pfas	ENSMUST00000149703	ENSMUSP00000133984	TRANSLATION	protein_coding	start/stop	-	5	117	0	2.29	0	46.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020899	Pfas	ENSMUST00000172987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020899	Pfas	ENSMUST00000173410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049957	Ccdc137	ENSMUST00000150400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049957	Ccdc137	ENSMUST00000176120	ENSMUSP00000135801	TRANSLATION	protein_coding	start	-	5	241	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049957	Ccdc137	ENSMUST00000175970	ENSMUSP00000134921	TRANSLATION	protein_coding	stop	-	2	111	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000049957	Ccdc137	ENSMUST00000176717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049957	Ccdc137	ENSMUST00000140308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049957	Ccdc137	ENSMUST00000148849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049957	Ccdc137	ENSMUST00000145702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049957	Ccdc137	ENSMUST00000058370	ENSMUSP00000062540	TRANSLATION	protein_coding	-	CCDS25736.1	1	290	0	0	1.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000020377	Ltc4s	ENSMUST00000221525	ENSMUSP00000152524	TRANSLATION	protein_coding	stop	-	3	141	0	0.75	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000020377	Ltc4s	ENSMUST00000101265	ENSMUSP00000098823	TRANSLATION	protein_coding	-	CCDS83799.1	1	113	6	3.33	0.5	59.6	0	-2,-4	-	-	16.002	MINOR
ENSMUSG00000020377	Ltc4s	ENSMUST00000102772	ENSMUSP00000099833	TRANSLATION	protein_coding	-	CCDS24631.1	1	150	6	4.33	1.5	57.1	1	-2,-4	-	-	17.748	PRINCIPAL:1
ENSMUSG00000020377	Ltc4s	ENSMUST00000221391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020377	Ltc4s	ENSMUST00000222076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020377	Ltc4s	ENSMUST00000125555	ENSMUSP00000121584	TRANSLATION	protein_coding	stop	-	1	178	0	0.75	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000020377	Ltc4s	ENSMUST00000221081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034227	Foxj1	ENSMUST00000036215	ENSMUSP00000038351	TRANSLATION	protein_coding	-	CCDS25665.1	1	421	0	0.6	7.5	127.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078853	Igtp	ENSMUST00000094169	ENSMUSP00000091721	TRANSLATION	protein_coding	-	-	1	53	0	0.3	0	0	0	-4,-7	-	-	0.792	MINOR
ENSMUSG00000078853	Igtp	ENSMUST00000035266	ENSMUSP00000047356	TRANSLATION	protein_coding	-	CCDS24725.1	1	423	14	2.28	0.5	528.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078853	Igtp	ENSMUST00000168280	ENSMUSP00000130878	TRANSLATION	protein_coding	-	-	1	72	0	0.5	0	0	0	-4,-6	-	-	1.314	MINOR
ENSMUSG00000020894	Vamp2	ENSMUST00000146847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020894	Vamp2	ENSMUST00000149559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020894	Vamp2	ENSMUST00000117780	ENSMUSP00000112611	TRANSLATION	protein_coding	-	-	2	163	0	2.5	0	115.5	0	-4,-7	-	-	11.748	MINOR
ENSMUSG00000020894	Vamp2	ENSMUST00000021273	ENSMUSP00000021273	TRANSLATION	protein_coding	-	CCDS24881.1	1	116	0	2.5	10.8	119.7	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020894	Vamp2	ENSMUST00000149780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020923	Ubtf	ENSMUST00000146896	ENSMUSP00000134665	TRANSLATION	protein_coding	stop	-	5	151	0	1.75	0	68.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000174400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020923	Ubtf	ENSMUST00000128016	ENSMUSP00000131930	TRANSLATION	protein_coding	-	-	2	169	0	1.15	0	48	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000178839	ENSMUSP00000136310	TRANSLATION	protein_coding	-	CCDS36343.1	1	727	0	11.65	1.5	333.7	0	-4,-5	-	-	8.778	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000107117	ENSMUSP00000102734	TRANSLATION	protein_coding	-	CCDS36343.1	5	727	0	11.65	1.5	333.7	0	-4,-5	-	-	8.778	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000107123	ENSMUSP00000102740	TRANSLATION	protein_coding	-	CCDS25495.1	5	764	0	12.25	1.5	367.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020923	Ubtf	ENSMUST00000107119	ENSMUSP00000102736	TRANSLATION	protein_coding	-	CCDS36343.1	1	727	0	11.65	1.5	333.7	0	-4,-5	-	-	8.778	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000079589	ENSMUSP00000078539	TRANSLATION	protein_coding	-	CCDS25495.1	5	764	0	12.25	1.5	367.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020923	Ubtf	ENSMUST00000006754	ENSMUSP00000006754	TRANSLATION	protein_coding	-	CCDS79056.1	1	752	0	11.65	0.5	333.7	0	-4,-5	-	-	8.778	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000174726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020923	Ubtf	ENSMUST00000107115	ENSMUSP00000102732	TRANSLATION	protein_coding	-	CCDS36343.1	5	727	0	11.65	1.5	333.7	0	-4,-5	-	-	8.778	MINOR
ENSMUSG00000020923	Ubtf	ENSMUST00000173870	ENSMUSP00000133611	TRANSLATION	protein_coding	-	CCDS25495.1	5	764	0	12.25	1.5	367.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020923	Ubtf	ENSMUST00000174302	ENSMUSP00000133844	TRANSLATION	protein_coding	-	CCDS25495.1	5	764	0	12.25	1.5	367.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018566	Slc2a4	ENSMUST00000141837	ENSMUSP00000136806	TRANSLATION	protein_coding	-	-	1	480	0	9.86	0	465.3	15	-4,-5	-	-	7.572	MINOR
ENSMUSG00000018566	Slc2a4	ENSMUST00000018710	ENSMUSP00000018710	TRANSLATION	protein_coding	-	CCDS36201.1	1	509	0	10.66	8.8	512.4	16	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018566	Slc2a4	ENSMUST00000178809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018566	Slc2a4	ENSMUST00000142500	ENSMUSP00000137463	TRANSLATION	protein_coding	stop	-	2	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018566	Slc2a4	ENSMUST00000135437	ENSMUSP00000137092	TRANSLATION	protein_coding	stop	-	5	57	0	1.75	0	43.9	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000018566	Slc2a4	ENSMUST00000152487	ENSMUSP00000136504	TRANSLATION	nonsense_mediated_decay	start	-	5	75	0	1.315	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018566	Slc2a4	ENSMUST00000178363	ENSMUSP00000136455	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	1	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018566	Slc2a4	ENSMUST00000179298	ENSMUSP00000136726	TRANSLATION	protein_coding	stop	-	3	242	0	5.86	0	218.2	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000020830	Vmo1	ENSMUST00000021179	ENSMUSP00000021179	TRANSLATION	protein_coding	-	CCDS24951.1	2	201	0	1.9	1.5	207.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020684	Rasl10b	ENSMUST00000175848	ENSMUSP00000135803	TRANSLATION	protein_coding	-	-	1	146	13	1.44	0.5	42.4	0	-4,-1	-	-	11.298	MINOR
ENSMUSG00000020684	Rasl10b	ENSMUST00000164425	ENSMUSP00000132696	TRANSLATION	protein_coding	-	CCDS25163.1	1	203	16	2.04	15	83.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000020684	Rasl10b	ENSMUST00000108140	ENSMUSP00000103775	TRANSLATION	protein_coding	-	CCDS25163.1	2	203	16	2.04	15	83.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000020684	Rasl10b	ENSMUST00000021022	ENSMUSP00000021022	TRANSLATION	protein_coding	-	CCDS25163.1	1	203	16	2.04	15	83.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000097239	Gm27029	ENSMUST00000107259	ENSMUSP00000102880	TRANSLATION	protein_coding,RT	-	-	5	543	3	9.08	0	61.7	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000097239	Gm27029	ENSMUST00000107257	ENSMUSP00000102878	TRANSLATION	protein_coding,RT	-	-	5	525	3	8.58	1.2	61.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000009588	St6galnac1	ENSMUST00000009732	ENSMUSP00000009732	TRANSLATION	protein_coding	-	CCDS36380.1	1	526	10	2.5	0.5	252	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018659	Pnpo	ENSMUST00000107629	ENSMUSP00000103255	TRANSLATION	protein_coding	-	-	3	102	1	2	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000018659	Pnpo	ENSMUST00000153896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018659	Pnpo	ENSMUST00000018803	ENSMUSP00000018803	TRANSLATION	protein_coding	-	CCDS25308.1	1	261	20	6.25	7.5	153.7	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000050541	Adra1b	ENSMUST00000124306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050541	Adra1b	ENSMUST00000139906	ENSMUSP00000123435	TRANSLATION	protein_coding	stop	-	1	462	0	1	0	266.1	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000050541	Adra1b	ENSMUST00000067258	ENSMUSP00000070200	TRANSLATION	protein_coding	-	CCDS24562.1	1	515	0	1	3.9	266.1	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000050541	Adra1b	ENSMUST00000167574	ENSMUSP00000129200	TRANSLATION	protein_coding	-	CCDS24562.1	1	515	0	1	3.9	266.1	7	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000063827	Olfr1382	ENSMUST00000217564	ENSMUSP00000149221	TRANSLATION	protein_coding	-	CCDS24615.1	5	311	0	0.28	5.1	163.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063827	Olfr1382	ENSMUST00000074543	ENSMUSP00000074130	TRANSLATION	protein_coding	-	CCDS24615.1	-	311	0	0.28	5.1	163.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063827	Olfr1382	ENSMUST00000213899	ENSMUSP00000148935	TRANSLATION	protein_coding	-	CCDS24615.1	5	311	0	0.28	5.1	163.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063827	Olfr1382	ENSMUST00000213707	ENSMUSP00000150149	TRANSLATION	protein_coding	-	CCDS24615.1	5	311	0	0.28	5.1	163.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063827	Olfr1382	ENSMUST00000213152	ENSMUSP00000150805	TRANSLATION	protein_coding	-	CCDS24615.1	5	311	0	0.28	5.1	163.8	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020534	Shmt1	ENSMUST00000173698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020534	Shmt1	ENSMUST00000174174	ENSMUSP00000134703	TRANSLATION	nonsense_mediated_decay	start	-	5	122	1	1.75	0	81.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020534	Shmt1	ENSMUST00000172804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020534	Shmt1	ENSMUST00000172659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020534	Shmt1	ENSMUST00000173260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020534	Shmt1	ENSMUST00000174719	ENSMUSP00000134318	TRANSLATION	protein_coding	start	-	5	439	15	9.83	0	446.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020534	Shmt1	ENSMUST00000124227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020534	Shmt1	ENSMUST00000135081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020534	Shmt1	ENSMUST00000174093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020534	Shmt1	ENSMUST00000174214	ENSMUSP00000134269	TRANSLATION	protein_coding	start	-	5	441	17	9.83	0	641.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020534	Shmt1	ENSMUST00000018744	ENSMUSP00000018744	TRANSLATION	protein_coding	-	CCDS24799.1	1	478	17	10.83	1.5	697.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061650	Med9	ENSMUST00000081980	ENSMUSP00000080641	TRANSLATION	protein_coding	-	CCDS24780.1	1	142	0	0	1.5	77.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018678	Sp2	ENSMUST00000107624	ENSMUSP00000103250	TRANSLATION	protein_coding	-	CCDS36291.1	1	613	12	2	6.3	65	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000018678	Sp2	ENSMUST00000107623	ENSMUSP00000103249	TRANSLATION	protein_coding	-	-	1	607	12	2	4.1	65	0	-4,-6	-	-	19.17	ALTERNATIVE:2
ENSMUSG00000018678	Sp2	ENSMUST00000062652	ENSMUSP00000051403	TRANSLATION	protein_coding	-	-	1	607	12	2	4.1	65	0	-4,-6	-	-	19.17	ALTERNATIVE:2
ENSMUSG00000091228	Gm20390	ENSMUST00000170303	ENSMUSP00000132590	TRANSLATION	protein_coding,RT	-	-	5	267	23	4	1.2	328.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072708	Olfr381	ENSMUST00000214623	ENSMUSP00000148899	TRANSLATION	protein_coding	-	CCDS25011.1	5	311	0	0.36	1.5	192.1	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072708	Olfr381	ENSMUST00000119863	ENSMUSP00000113846	TRANSLATION	protein_coding	-	CCDS25011.1	3	311	0	0.36	1.5	192.1	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072708	Olfr381	ENSMUST00000215358	ENSMUSP00000149355	TRANSLATION	protein_coding	-	CCDS25011.1	5	311	0	0.36	1.5	192.1	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072708	Olfr381	ENSMUST00000078358	ENSMUSP00000077467	TRANSLATION	protein_coding	-	CCDS25011.1	-	311	0	0.36	1.5	192.1	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018377	Vezf1	ENSMUST00000018521	ENSMUSP00000018521	TRANSLATION	protein_coding	-	CCDS48880.1	1	518	24	2.23	6.3	91.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000018377	Vezf1	ENSMUST00000143052	ENSMUSP00000114394	TRANSLATION	protein_coding	start	-	5	336	18	2.23	0	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017188	Coa3	ENSMUST00000168089	ENSMUSP00000130367	TRANSLATION	protein_coding	-	-	3	90	0	0	0	111.1	0	-4,-6	-	-	2.01	MINOR
ENSMUSG00000017188	Coa3	ENSMUST00000017332	ENSMUSP00000017332	TRANSLATION	protein_coding	-	CCDS25460.1	1	108	0	0	1.5	177.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000093989	Rnasek	ENSMUST00000125752	ENSMUSP00000135891	TRANSLATION	nonsense_mediated_decay	-	-	2	35	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000093989	Rnasek	ENSMUST00000040428	ENSMUSP00000048271	TRANSLATION	protein_coding	-	CCDS36204.1	1	98	0	0	12.7	0	2	-1,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000093989	Rnasek	ENSMUST00000141880	ENSMUSP00000135383	TRANSLATION	protein_coding	-	-	2	71	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000045288	Ush1g	ENSMUST00000103037	ENSMUSP00000099326	TRANSLATION	protein_coding	-	CCDS25627.1	1	461	0	1.4	7.5	95.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018428	Akap1	ENSMUST00000153787	ENSMUSP00000123018	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018428	Akap1	ENSMUST00000018572	ENSMUSP00000018572	TRANSLATION	protein_coding	-	CCDS25229.1	1	857	0	2.66	1.5	139.4	2	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000018428	Akap1	ENSMUST00000107904	ENSMUSP00000103537	TRANSLATION	protein_coding	-	-	5	890	0	2.66	0	139.4	2	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000018428	Akap1	ENSMUST00000153961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018428	Akap1	ENSMUST00000143720	ENSMUSP00000122295	TRANSLATION	nonsense_mediated_decay	-	-	1	547	0	0	0	19.1	2	-3,-6	-	-	-1	MINOR
ENSMUSG00000018428	Akap1	ENSMUST00000107903	ENSMUSP00000103536	TRANSLATION	protein_coding	-	CCDS25229.1	1	857	0	2.66	1.5	139.4	2	-3,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000020459	Mtif2	ENSMUST00000156352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020459	Mtif2	ENSMUST00000129893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020459	Mtif2	ENSMUST00000144321	ENSMUSP00000114299	TRANSLATION	protein_coding	stop	-	1	401	15	6.33	0	98	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020459	Mtif2	ENSMUST00000132783	ENSMUSP00000121327	TRANSLATION	protein_coding	start/stop	-	5	247	15	5.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020459	Mtif2	ENSMUST00000020749	ENSMUSP00000020749	TRANSLATION	protein_coding	-	CCDS24496.1	1	727	15	12.33	3.9	216.2	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000020459	Mtif2	ENSMUST00000136351	ENSMUSP00000122801	TRANSLATION	protein_coding	stop	-	3	196	8	1.58	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020459	Mtif2	ENSMUST00000093239	ENSMUSP00000090926	TRANSLATION	protein_coding	-	CCDS24496.1	1	727	15	12.33	3.9	216.2	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000020459	Mtif2	ENSMUST00000133452	ENSMUSP00000122233	TRANSLATION	protein_coding	stop	-	5	167	0	0.43	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039670	Oxld1	ENSMUST00000137632	ENSMUSP00000135197	TRANSLATION	protein_coding	start/stop	-	1	124	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039670	Oxld1	ENSMUST00000044007	ENSMUSP00000036860	TRANSLATION	protein_coding	-	CCDS25735.1	1	201	0	0	0.5	0	0	-3,0	-	-	0	PRINCIPAL:1
ENSMUSG00000041695	Kcnj2	ENSMUST00000042970	ENSMUSP00000037192	TRANSLATION	protein_coding	-	CCDS25594.1	1	428	0	1	7.5	608	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020536	Llgl1	ENSMUST00000052346	ENSMUSP00000060749	TRANSLATION	protein_coding	-	CCDS48812.1	1	1062	0	2.56	4.1	138.6	0	-4,-2	-	-	13	PRINCIPAL:4
ENSMUSG00000020536	Llgl1	ENSMUST00000128749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020536	Llgl1	ENSMUST00000108719	ENSMUSP00000104359	TRANSLATION	protein_coding	-	CCDS48813.1	1	1036	0	2.56	1.7	138.6	0	-4,-2	-	-	12.226	ALTERNATIVE:2
ENSMUSG00000020386	Sar1b	ENSMUST00000136363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020386	Sar1b	ENSMUST00000020653	ENSMUSP00000020653	TRANSLATION	protein_coding	-	CCDS24661.1	1	198	16	5.5	20.2	210.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000087279	4930544D05Rik	ENSMUST00000125387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087279	4930544D05Rik	ENSMUST00000144960	ENSMUSP00000136077	TRANSLATION	protein_coding	-	CCDS56785.1	5	171	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000087279	4930544D05Rik	ENSMUST00000180052	ENSMUSP00000137259	TRANSLATION	protein_coding	-	-	5	214	0	0	1.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000087279	4930544D05Rik	ENSMUST00000135865	ENSMUSP00000135933	TRANSLATION	nonsense_mediated_decay	-	-	3	125	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020895	Tmem107	ENSMUST00000125215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000152142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000094081	ENSMUSP00000091624	TRANSLATION	protein_coding	-	CCDS24880.1	1	143	0	0	0.5	146.2	3	-1,-5	-	-	5.4	MINOR
ENSMUSG00000020895	Tmem107	ENSMUST00000123821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000146646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000123038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000128323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020895	Tmem107	ENSMUST00000075980	ENSMUSP00000075363	TRANSLATION	protein_coding	-	CCDS24879.1	1	140	0	0	13	156.2	4	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020464	Pnpt1	ENSMUST00000148173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020464	Pnpt1	ENSMUST00000020756	ENSMUSP00000020756	TRANSLATION	protein_coding	-	CCDS24490.1	1	783	10	19.72	2.9	227.7	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000020464	Pnpt1	ENSMUST00000131527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020464	Pnpt1	ENSMUST00000154924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060180	Myh13	ENSMUST00000108684	ENSMUSP00000104324	TRANSLATION	protein_coding	-	CCDS36185.1	5	1938	15	36.23	4.2	1511.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000060180	Myh13	ENSMUST00000081911	ENSMUSP00000080584	TRANSLATION	protein_coding	-	CCDS36185.1	5	1938	15	36.23	4.2	1511.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000060180	Myh13	ENSMUST00000180845	ENSMUSP00000137731	TRANSLATION	protein_coding	-	CCDS36185.1	5	1938	15	36.23	4.2	1511.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000060180	Myh13	ENSMUST00000181027	ENSMUSP00000137888	TRANSLATION	protein_coding	start/stop	-	3	223	0	3.8	0	58.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020799	Tekt1	ENSMUST00000108502	ENSMUSP00000104142	TRANSLATION	protein_coding	-	CCDS36215.1	1	418	0	0	7.5	491.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020799	Tekt1	ENSMUST00000021155	ENSMUSP00000021155	TRANSLATION	protein_coding	-	CCDS36215.1	1	418	0	0	7.5	491.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020799	Tekt1	ENSMUST00000108503	ENSMUSP00000104143	TRANSLATION	protein_coding	-	CCDS36215.1	1	418	0	0	7.5	491.7	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000082101	Slfn14	ENSMUST00000163961	ENSMUSP00000139132	TRANSLATION	protein_coding	-	CCDS70269.1	1	899	16	0	0.5	58.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035575	Utp6	ENSMUST00000131921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035575	Utp6	ENSMUST00000146127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035575	Utp6	ENSMUST00000043152	ENSMUSP00000046643	TRANSLATION	protein_coding	-	CCDS25124.1	1	597	0	2.05	2.7	88.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035575	Utp6	ENSMUST00000108241	ENSMUSP00000103876	TRANSLATION	protein_coding	-	CCDS25124.1	1	597	0	2.05	2.7	88.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018634	Crhr1	ENSMUST00000093925	ENSMUSP00000091455	TRANSLATION	protein_coding	-	CCDS25526.1	1	415	0	8.34	8.8	324.3	0	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000004044	Cavin1	ENSMUST00000132934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004044	Cavin1	ENSMUST00000060792	ENSMUSP00000058321	TRANSLATION	protein_coding	-	CCDS25442.1	1	392	0	1	5.1	330.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000301	Pemt	ENSMUST00000102693	ENSMUSP00000099754	TRANSLATION	protein_coding	-	CCDS78957.1	1	236	0	0	0.5	114.6	11	-4,-5	-	-	6	MINOR
ENSMUSG00000000301	Pemt	ENSMUST00000136660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000301	Pemt	ENSMUST00000148512	ENSMUSP00000120364	TRANSLATION	protein_coding	stop	-	5	128	0	0	0	27.3	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000000301	Pemt	ENSMUST00000102692	ENSMUSP00000099753	TRANSLATION	protein_coding	-	CCDS24782.1	1	199	0	0	6.3	114.6	11	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000000301	Pemt	ENSMUST00000133028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000301	Pemt	ENSMUST00000150954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000301	Pemt	ENSMUST00000143646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000301	Pemt	ENSMUST00000147422	ENSMUSP00000116314	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	26.5	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000000301	Pemt	ENSMUST00000146461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000301	Pemt	ENSMUST00000000310	ENSMUSP00000000310	TRANSLATION	protein_coding	-	CCDS24782.1	3	199	0	0	6.3	114.6	11	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000045140	Pigw	ENSMUST00000108080	ENSMUSP00000103715	TRANSLATION	protein_coding	-	CCDS36263.1	1	503	0	0	1.5	121.5	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045140	Pigw	ENSMUST00000067058	ENSMUSP00000064547	TRANSLATION	protein_coding	-	CCDS36263.1	1	503	0	0	1.5	121.5	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000014349	Ube2z	ENSMUST00000100528	ENSMUSP00000098097	TRANSLATION	protein_coding	-	CCDS36289.1	1	356	0	6.75	5.1	102.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044811	Cd300c2	ENSMUST00000141188	ENSMUSP00000124035	TRANSLATION	nonsense_mediated_decay	-	-	1	80	0	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000044811	Cd300c2	ENSMUST00000092464	ENSMUSP00000090121	TRANSLATION	protein_coding	-	CCDS25616.1	1	228	0	2	0.5	44.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000049721	Gal3st1	ENSMUST00000078757	ENSMUSP00000077815	TRANSLATION	protein_coding	-	CCDS24373.1	1	423	0	0	5.1	603.3	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000049721	Gal3st1	ENSMUST00000109981	ENSMUSP00000105608	TRANSLATION	protein_coding	-	CCDS24373.1	1	423	0	0	5.1	603.3	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000049721	Gal3st1	ENSMUST00000063004	ENSMUSP00000058348	TRANSLATION	protein_coding	-	CCDS24373.1	1	423	0	0	5.1	603.3	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000020610	Amz2	ENSMUST00000141739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020610	Amz2	ENSMUST00000125108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020610	Amz2	ENSMUST00000131181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020610	Amz2	ENSMUST00000154875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020610	Amz2	ENSMUST00000103061	ENSMUSP00000099350	TRANSLATION	protein_coding	-	-	1	359	8	1.4	3.4	49.2	0	-4,-5	-	-	18.94	ALTERNATIVE:2
ENSMUSG00000020610	Amz2	ENSMUST00000155036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020610	Amz2	ENSMUST00000020929	ENSMUSP00000020929	TRANSLATION	protein_coding	-	-	2	322	8	1.4	0	49.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020610	Amz2	ENSMUST00000238825	ENSMUSP00000159063	TRANSLATION	protein_coding	-	CCDS25579.1	-	363	8	1.4	0.5	49.2	0	-4,-5	-	-	17.94	PRINCIPAL:2
ENSMUSG00000020610	Amz2	ENSMUST00000092500	ENSMUSP00000090157	TRANSLATION	protein_coding	-	CCDS25579.1	1	363	8	1.4	0.5	49.2	0	-4,-5	-	-	17.94	PRINCIPAL:2
ENSMUSG00000049809	Krtap9-3	ENSMUST00000062683	ENSMUSP00000057445	TRANSLATION	protein_coding	-	CCDS36311.1	-	136	0	0	0.5	136.6	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000000724	Cryba1	ENSMUST00000078623	ENSMUSP00000077693	TRANSLATION	protein_coding	-	CCDS25084.1	1	215	0	4.45	9.6	203.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000724	Cryba1	ENSMUST00000124178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020782	Llgl2	ENSMUST00000172552	ENSMUSP00000133803	TRANSLATION	protein_coding	stop	-	3	101	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020782	Llgl2	ENSMUST00000177736	ENSMUSP00000136054	TRANSLATION	protein_coding	-	CCDS56820.1	2	1051	0	3.438	0.5	139.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000020782	Llgl2	ENSMUST00000147878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020782	Llgl2	ENSMUST00000128826	ENSMUSP00000118304	TRANSLATION	protein_coding	start	-	3	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020782	Llgl2	ENSMUST00000137900	ENSMUSP00000119675	TRANSLATION	protein_coding	stop	-	2	158	0	2.318	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020782	Llgl2	ENSMUST00000103032	ENSMUSP00000099321	TRANSLATION	protein_coding	-	CCDS25649.1	1	1027	0	3.438	1.5	139.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000020782	Llgl2	ENSMUST00000132999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020782	Llgl2	ENSMUST00000173289	ENSMUSP00000133790	TRANSLATION	protein_coding	stop	-	5	148	0	2.12	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020782	Llgl2	ENSMUST00000137951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020782	Llgl2	ENSMUST00000130518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020782	Llgl2	ENSMUST00000133250	ENSMUSP00000118344	TRANSLATION	protein_coding	stop	-	5	146	0	1.88	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020782	Llgl2	ENSMUST00000155878	ENSMUSP00000117649	TRANSLATION	protein_coding	stop	-	3	128	0	1.88	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044629	Cnrip1	ENSMUST00000131515	ENSMUSP00000122150	TRANSLATION	protein_coding	stop	-	1	184	0	0	0	177.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044629	Cnrip1	ENSMUST00000135637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044629	Cnrip1	ENSMUST00000058159	ENSMUSP00000050036	TRANSLATION	protein_coding	-	CCDS24447.1	1	164	0	0	7.6	229	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000018931	Natd1	ENSMUST00000143800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018931	Natd1	ENSMUST00000019075	ENSMUSP00000019075	TRANSLATION	protein_coding	-	CCDS24802.1	1	110	18	1	7.9	79.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000053574	4930563E22Rik	ENSMUST00000124762	ENSMUSP00000159117	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	0	0.5	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000053574	4930563E22Rik	ENSMUST00000066087	ENSMUSP00000159068	TRANSLATION	protein_coding	-	-	-	129	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000078771	Evi2a	ENSMUST00000154415	ENSMUSP00000137045	TRANSLATION	protein_coding	start	-	2	78	0	0	0	59.4	0	0,-3	-	-	-1	MINOR
ENSMUSG00000078771	Evi2a	ENSMUST00000170799	ENSMUSP00000125936	TRANSLATION	protein_coding	-	CCDS25122.1	2	223	0	0	1.5	343.5	1	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000078771	Evi2a	ENSMUST00000146611	ENSMUSP00000115683	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	29.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078771	Evi2a	ENSMUST00000133148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078771	Evi2a	ENSMUST00000103236	ENSMUSP00000099526	TRANSLATION	protein_coding	-	CCDS25122.1	1	223	0	0	1.5	343.5	1	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000020930	Ccdc103	ENSMUST00000159834	ENSMUSP00000125214	TRANSLATION	protein_coding	-	-	1	105	0	0	0	101.2	0	-4,-5	-	-	2.424	MINOR
ENSMUSG00000020930	Ccdc103	ENSMUST00000021307	ENSMUSP00000021307	TRANSLATION	protein_coding	-	CCDS25506.1	1	237	0	0	1.5	160.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037992	Rara	ENSMUST00000139399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037992	Rara	ENSMUST00000107473	ENSMUSP00000103097	TRANSLATION	protein_coding	-	CCDS48905.1	1	459	31	7	1.5	193.1	0	-4,-5	-	-	17.829	MINOR
ENSMUSG00000037992	Rara	ENSMUST00000107475	ENSMUSP00000103099	TRANSLATION	protein_coding	-	CCDS36304.1	1	462	31	7.2	7.5	193.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000037992	Rara	ENSMUST00000164748	ENSMUSP00000129791	TRANSLATION	protein_coding	-	CCDS36304.1	1	462	31	7.2	7.5	193.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000037992	Rara	ENSMUST00000147985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037992	Rara	ENSMUST00000068133	ENSMUSP00000069744	TRANSLATION	protein_coding	-	CCDS36304.1	1	462	31	7.2	7.5	193.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000037992	Rara	ENSMUST00000107474	ENSMUSP00000103098	TRANSLATION	protein_coding	-	CCDS36304.1	5	462	31	7.2	7.5	193.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000010021	Kif19a	ENSMUST00000138340	ENSMUSP00000122743	TRANSLATION	protein_coding	start	-	5	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010021	Kif19a	ENSMUST00000134165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010021	Kif19a	ENSMUST00000137326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010021	Kif19a	ENSMUST00000131782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010021	Kif19a	ENSMUST00000138804	ENSMUSP00000115663	TRANSLATION	protein_coding	stop	-	5	709	11	7.25	0	196.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010021	Kif19a	ENSMUST00000126555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010021	Kif19a	ENSMUST00000084368	ENSMUSP00000081398	TRANSLATION	protein_coding	-	CCDS36367.1	1	997	11	8.25	2.9	366.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019303	Psmc3ip	ENSMUST00000019447	ENSMUSP00000019447	TRANSLATION	protein_coding	-	CCDS25448.1	1	217	0	4.35	7.6	222	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000019303	Psmc3ip	ENSMUST00000142545	ENSMUSP00000117100	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	2.566	0	100.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019303	Psmc3ip	ENSMUST00000134520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019303	Psmc3ip	ENSMUST00000126386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050860	Phospho1	ENSMUST00000176538	ENSMUSP00000135721	TRANSLATION	protein_coding	start	-	3	191	4	0	0	240.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050860	Phospho1	ENSMUST00000054173	ENSMUSP00000057858	TRANSLATION	protein_coding	-	CCDS36288.1	2	267	8	0	8.8	334.1	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000050860	Phospho1	ENSMUST00000150134	ENSMUSP00000117244	TRANSLATION	protein_coding	stop	-	2	47	4	0	0	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033389	Arhgap44	ENSMUST00000093002	ENSMUSP00000090681	TRANSLATION	protein_coding	-	-	5	814	0	7.21	2.7	377.9	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000033389	Arhgap44	ENSMUST00000047463	ENSMUSP00000039139	TRANSLATION	protein_coding	-	CCDS36180.1	1	764	0	7.21	0.5	377.9	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000033389	Arhgap44	ENSMUST00000093001	ENSMUSP00000090680	TRANSLATION	protein_coding	-	-	2	211	0	2.05	0	150.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033389	Arhgap44	ENSMUST00000130420	ENSMUSP00000115612	TRANSLATION	protein_coding	start	-	5	645	0	5.36	0	248.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025137	Pcyt2	ENSMUST00000145356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000142049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000124468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000160059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000124504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000106187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000026129	ENSMUSP00000026129	TRANSLATION	protein_coding	-	CCDS25747.1	1	404	13	9.55	6.3	157.3	0	-4,-7	-	-	19.947	PRINCIPAL:3
ENSMUSG00000025137	Pcyt2	ENSMUST00000106188	ENSMUSP00000101794	TRANSLATION	protein_coding	-	CCDS83946.1	1	386	13	9.8	7.5	157.3	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000025137	Pcyt2	ENSMUST00000126148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000134671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025137	Pcyt2	ENSMUST00000126723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025137	Pcyt2	ENSMUST00000143502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040985	Sun3	ENSMUST00000043377	ENSMUSP00000045199	TRANSLATION	protein_coding	-	CCDS70140.1	1	320	0	4.35	1.5	157.5	0	-1,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040985	Sun3	ENSMUST00000102909	ENSMUSP00000099973	TRANSLATION	protein_coding	-	CCDS24430.1	1	260	0	4.35	1.5	157.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020803	Txndc17	ENSMUST00000128648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020803	Txndc17	ENSMUST00000021158	ENSMUSP00000021158	TRANSLATION	protein_coding	-	CCDS24980.1	1	123	11	3.25	11	172.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000050343	Olfr1378	ENSMUST00000213259	ENSMUSP00000149432	TRANSLATION	protein_coding	-	CCDS24644.1	5	315	0	0.42	1.5	182	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050343	Olfr1378	ENSMUST00000052285	ENSMUSP00000058119	TRANSLATION	protein_coding	-	CCDS24644.1	-	315	0	0.42	1.5	182	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043602	Zfp3	ENSMUST00000060444	ENSMUSP00000054020	TRANSLATION	protein_coding	-	CCDS24966.1	1	497	52	0.6	0.5	302.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020437	Myo1g	ENSMUST00000156878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020437	Myo1g	ENSMUST00000003459	ENSMUSP00000003459	TRANSLATION	protein_coding	-	CCDS24421.1	1	1024	15	16.95	0.5	898.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020437	Myo1g	ENSMUST00000144725	ENSMUSP00000120975	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020437	Myo1g	ENSMUST00000131823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020437	Myo1g	ENSMUST00000134639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020437	Myo1g	ENSMUST00000134489	ENSMUSP00000122356	TRANSLATION	protein_coding	stop	-	3	99	6	1.5	0	51.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020437	Myo1g	ENSMUST00000146536	ENSMUSP00000122438	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020375	Rufy1	ENSMUST00000020643	ENSMUSP00000020643	TRANSLATION	protein_coding	-	CCDS24635.1	1	712	8	7.64	1.5	175.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020375	Rufy1	ENSMUST00000129304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020375	Rufy1	ENSMUST00000135508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018932	Map2k3	ENSMUST00000126043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018932	Map2k3	ENSMUST00000137609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018932	Map2k3	ENSMUST00000019076	ENSMUSP00000019076	TRANSLATION	protein_coding	-	CCDS24804.1	1	347	23	8.62	7.5	193.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018932	Map2k3	ENSMUST00000145828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018932	Map2k3	ENSMUST00000137739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018932	Map2k3	ENSMUST00000130269	ENSMUSP00000114430	TRANSLATION	nonsense_mediated_decay	-	-	1	173	16	4.12	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035592	Krt33a	ENSMUST00000018399	ENSMUSP00000018399	TRANSLATION	protein_coding	-	CCDS25403.1	1	404	0	3.76	6.3	358.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000035592	Krt33a	ENSMUST00000138756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000094	Tbx4	ENSMUST00000108047	ENSMUSP00000103682	TRANSLATION	protein_coding	-	CCDS25196.1	5	552	5	5.24	1.5	272.8	0	-4,-5	-	-	17.2	PRINCIPAL:1
ENSMUSG00000000094	Tbx4	ENSMUST00000108045	ENSMUSP00000103680	TRANSLATION	protein_coding	-	CCDS48874.1	1	452	2	4	3.5	217.1	0	-4,-7	-	-	9.18	MINOR
ENSMUSG00000000094	Tbx4	ENSMUST00000000096	ENSMUSP00000000096	TRANSLATION	protein_coding	-	CCDS25196.1	1	552	5	5.24	1.5	272.8	0	-4,-5	-	-	17.2	PRINCIPAL:1
ENSMUSG00000020519	Sap30l	ENSMUST00000020826	ENSMUSP00000020826	TRANSLATION	protein_coding	-	CCDS36160.1	1	182	4	4	9.7	212.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020806	Rhbdf2	ENSMUST00000138125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020806	Rhbdf2	ENSMUST00000103029	ENSMUSP00000099318	TRANSLATION	protein_coding	-	CCDS25672.1	1	827	0	0	2.7	406.9	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020806	Rhbdf2	ENSMUST00000103028	ENSMUSP00000099317	TRANSLATION	protein_coding	-	CCDS25672.1	1	827	0	0	2.7	406.9	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020806	Rhbdf2	ENSMUST00000126819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000318	Clec10a	ENSMUST00000178945	ENSMUSP00000137447	TRANSLATION	protein_coding	-	-	1	308	9	3.515	0	219.9	2	-4,-7	-	-	10.62	MINOR
ENSMUSG00000000318	Clec10a	ENSMUST00000144935	ENSMUSP00000136500	TRANSLATION	protein_coding	stop	-	5	214	6	2.715	0	112.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000318	Clec10a	ENSMUST00000180106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000318	Clec10a	ENSMUST00000152635	ENSMUSP00000115739	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000318	Clec10a	ENSMUST00000153959	ENSMUSP00000117772	TRANSLATION	protein_coding	start	-	3	103	2	1.913	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000318	Clec10a	ENSMUST00000150966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000318	Clec10a	ENSMUST00000178567	ENSMUSP00000136322	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	57.2	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000000318	Clec10a	ENSMUST00000143298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000318	Clec10a	ENSMUST00000102571	ENSMUSP00000099631	TRANSLATION	protein_coding	-	CCDS24936.1	1	304	15	4.375	0.5	247.5	2	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000000318	Clec10a	ENSMUST00000000327	ENSMUSP00000000327	TRANSLATION	protein_coding	-	CCDS56784.1	1	305	15	4.375	0.5	245.2	2	-4,-7	-	-	17.862	ALTERNATIVE:2
ENSMUSG00000062825	Actg1	ENSMUST00000128055	ENSMUSP00000134296	TRANSLATION	protein_coding	stop	-	2	268	12	3	0	264	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062825	Actg1	ENSMUST00000156343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062825	Actg1	ENSMUST00000131103	ENSMUSP00000134070	TRANSLATION	nonsense_mediated_decay	-	-	5	132	6	2	0	147.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062825	Actg1	ENSMUST00000071555	ENSMUSP00000071486	TRANSLATION	protein_coding	-	CCDS25730.1	1	375	24	7.25	21.5	504.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000062825	Actg1	ENSMUST00000089616	ENSMUSP00000087043	TRANSLATION	protein_coding	start	-	5	105	7	2.5	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062825	Actg1	ENSMUST00000141406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062825	Actg1	ENSMUST00000062147	ENSMUSP00000101821	TRANSLATION	protein_coding	-	-	3	153	15	3.5	0	208.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000062825	Actg1	ENSMUST00000144868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062825	Actg1	ENSMUST00000106215	ENSMUSP00000101822	TRANSLATION	protein_coding	-	CCDS25730.1	1	375	24	7.25	21.5	504.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020273	Papolg	ENSMUST00000145013	ENSMUSP00000115518	TRANSLATION	protein_coding	start	-	1	256	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020273	Papolg	ENSMUST00000102863	ENSMUSP00000099927	TRANSLATION	protein_coding	-	-	1	429	12	11.33	0	507.3	1	-4,-5	-	-	13.998	MINOR
ENSMUSG00000020273	Papolg	ENSMUST00000020513	ENSMUSP00000020513	TRANSLATION	protein_coding	-	CCDS24481.1	1	739	12	13.33	3.9	507.2	1	-4,-5	-	-	18.994	PRINCIPAL:1
ENSMUSG00000020273	Papolg	ENSMUST00000150711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069910	Spdl1	ENSMUST00000093191	ENSMUSP00000090882	TRANSLATION	protein_coding	-	CCDS24541.1	1	608	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000069910	Spdl1	ENSMUST00000148387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069910	Spdl1	ENSMUST00000148853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018486	Wnt9b	ENSMUST00000018630	ENSMUSP00000018630	TRANSLATION	protein_coding	-	CCDS25522.1	1	359	0	1.48	0.5	319.4	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000078676	Casc3	ENSMUST00000017384	ENSMUSP00000017384	TRANSLATION	protein_coding	-	CCDS36302.1	2	698	0	2.6	1.5	84.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000078676	Casc3	ENSMUST00000169695	ENSMUSP00000130926	TRANSLATION	protein_coding	-	CCDS36302.1	1	698	0	2.6	1.5	84.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000078676	Casc3	ENSMUST00000147065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078676	Casc3	ENSMUST00000144220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070330	Tmem235	ENSMUST00000093905	ENSMUSP00000091432	TRANSLATION	protein_coding	-	CCDS36383.1	5	211	0	1.34	0.5	155.3	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020116	Pno1	ENSMUST00000123754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020116	Pno1	ENSMUST00000020317	ENSMUSP00000020317	TRANSLATION	protein_coding	-	CCDS24449.1	1	248	0	3.23	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020330	Hmmr	ENSMUST00000127705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020330	Hmmr	ENSMUST00000156399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020330	Hmmr	ENSMUST00000152749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020330	Hmmr	ENSMUST00000020579	ENSMUSP00000020579	TRANSLATION	protein_coding	-	CCDS24548.1	1	794	0	0	0.5	672.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020315	Sptbn1	ENSMUST00000124231	ENSMUSP00000114841	TRANSLATION	protein_coding	stop	-	1	2092	0	24.164	0	1328.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020315	Sptbn1	ENSMUST00000011877	ENSMUSP00000011877	TRANSLATION	protein_coding	-	CCDS36123.1	1	2363	0	26.664	9.5	1406.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020315	Sptbn1	ENSMUST00000145315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020315	Sptbn1	ENSMUST00000006629	ENSMUSP00000006629	TRANSLATION	protein_coding	-	CCDS36123.1	5	2363	0	26.664	9.5	1406.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020315	Sptbn1	ENSMUST00000149117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020315	Sptbn1	ENSMUST00000127209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020315	Sptbn1	ENSMUST00000133466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020315	Sptbn1	ENSMUST00000102838	ENSMUSP00000099902	TRANSLATION	protein_coding	-	CCDS24506.1	1	2154	0	24.324	7.1	1328.8	0	-4,-5	-	-	4.818	MINOR
ENSMUSG00000000976	Heatr6	ENSMUST00000125602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000976	Heatr6	ENSMUST00000001002	ENSMUSP00000001002	TRANSLATION	protein_coding	-	CCDS36259.1	1	1184	0	0	0.5	235.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000000976	Heatr6	ENSMUST00000136572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000976	Heatr6	ENSMUST00000127428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000976	Heatr6	ENSMUST00000125831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000107877	Gm43951	ENSMUST00000204457	ENSMUSP00000144817	TRANSLATION	protein_coding	-	-	-	962	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000107877	Gm43951	ENSMUST00000108506	ENSMUSP00000104146	TRANSLATION	protein_coding	-	CCDS24979.1	1	959	0	0	1.5	1641.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034164	Emid1	ENSMUST00000132196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034164	Emid1	ENSMUST00000132328	ENSMUSP00000117779	TRANSLATION	protein_coding	start	-	5	223	0	3.8	0	44	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034164	Emid1	ENSMUST00000151906	ENSMUSP00000124014	TRANSLATION	protein_coding	start	-	3	116	0	2	0	44	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034164	Emid1	ENSMUST00000163299	ENSMUSP00000131391	TRANSLATION	protein_coding	-	-	5	442	0	4.96	1.5	97.6	0	3,-2	-	-	11.76	ALTERNATIVE:2
ENSMUSG00000034164	Emid1	ENSMUST00000153308	ENSMUSP00000125605	TRANSLATION	nonsense_mediated_decay	start	-	3	55	0	1.5	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034164	Emid1	ENSMUST00000156492	ENSMUSP00000124431	TRANSLATION	nonsense_mediated_decay	-	-	5	157	0	0	0	57.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034164	Emid1	ENSMUST00000062821	ENSMUSP00000061704	TRANSLATION	protein_coding	-	CCDS24398.1	1	444	0	4.96	1.5	101.6	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000034164	Emid1	ENSMUST00000138551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093920	Olfr463	ENSMUST00000215150	ENSMUSP00000149765	TRANSLATION	protein_coding	-	CCDS25222.1	5	311	0	0.42	8.8	139.1	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093920	Olfr463	ENSMUST00000081417	ENSMUSP00000080146	TRANSLATION	protein_coding	-	CCDS25222.1	-	311	0	0.42	8.8	139.1	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093920	Olfr463	ENSMUST00000217095	ENSMUSP00000149255	TRANSLATION	protein_coding	-	CCDS25222.1	5	311	0	0.42	8.8	139.1	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059504	Olfr314	ENSMUST00000076393	ENSMUSP00000075729	TRANSLATION	protein_coding	-	CCDS24745.1	-	330	0	0.48	1.5	169.8	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059504	Olfr314	ENSMUST00000205189	ENSMUSP00000145387	TRANSLATION	protein_coding	-	CCDS24745.1	3	330	0	0.48	1.5	169.8	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060918	Olfr51	ENSMUST00000213415	ENSMUSP00000151005	TRANSLATION	protein_coding	-	CCDS24646.1	5	307	0	0.42	1.5	169.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060918	Olfr51	ENSMUST00000076514	ENSMUSP00000075832	TRANSLATION	protein_coding	-	CCDS24646.1	-	307	0	0.42	1.5	169.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000018927	Ccl6	ENSMUST00000138145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018927	Ccl6	ENSMUST00000019071	ENSMUSP00000019071	TRANSLATION	protein_coding	-	CCDS25171.1	1	116	0	1.8	1.5	58.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000018927	Ccl6	ENSMUST00000150243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020441	2310033P09Rik	ENSMUST00000020719	ENSMUSP00000020719	TRANSLATION	protein_coding	-	CCDS24764.1	1	260	0	0	1.5	106.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038216	Pnmt	ENSMUST00000124527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038216	Pnmt	ENSMUST00000041301	ENSMUSP00000035549	TRANSLATION	protein_coding	-	CCDS25347.1	1	295	24	3	0.5	306	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069793	Slfn9	ENSMUST00000092840	ENSMUSP00000090515	TRANSLATION	protein_coding	-	CCDS25154.1	5	910	15	0	0.5	55.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069793	Slfn9	ENSMUST00000038211	ENSMUSP00000044435	TRANSLATION	protein_coding	-	CCDS25154.1	1	910	15	0	0.5	55.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069793	Slfn9	ENSMUST00000138797	ENSMUSP00000115273	TRANSLATION	protein_coding	stop	-	5	641	12	0	0	55.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020921	Tmem101	ENSMUST00000136434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020921	Tmem101	ENSMUST00000143986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020921	Tmem101	ENSMUST00000021296	ENSMUSP00000021296	TRANSLATION	protein_coding	-	CCDS25489.1	1	257	0	0	12.8	393.3	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000070379	Olfr402	ENSMUST00000073675	ENSMUSP00000073356	TRANSLATION	protein_coding	-	CCDS25026.1	-	315	0	0.36	5.2	177.9	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000070379	Olfr402	ENSMUST00000216722	ENSMUSP00000151050	TRANSLATION	protein_coding	-	CCDS25026.1	5	315	0	0.36	5.2	177.9	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039307	Hexdc	ENSMUST00000124925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039307	Hexdc	ENSMUST00000124768	ENSMUSP00000122008	TRANSLATION	protein_coding	stop	-	5	152	2	1.53	0	30.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039307	Hexdc	ENSMUST00000128913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039307	Hexdc	ENSMUST00000151495	ENSMUSP00000123073	TRANSLATION	protein_coding	start	-	1	556	2	3.195	0	37.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039307	Hexdc	ENSMUST00000124761	ENSMUSP00000116406	TRANSLATION	protein_coding	start/stop	-	5	351	2	2.625	0	38.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039307	Hexdc	ENSMUST00000106117	ENSMUSP00000101723	TRANSLATION	protein_coding	-	CCDS49013.1	1	486	2	3.195	1.5	38.1	0	-4,-7	-	-	13.874	PRINCIPAL:2
ENSMUSG00000039307	Hexdc	ENSMUST00000038831	ENSMUSP00000048479	TRANSLATION	protein_coding	-	-	5	559	2	3.195	0.5	37.7	0	-4,-7	-	-	13.814	ALTERNATIVE:2
ENSMUSG00000039307	Hexdc	ENSMUST00000131009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000093138	ENSMUSP00000090825	TRANSLATION	protein_coding	-	CCDS36146.1	1	1246	4	5.27	1.5	306.5	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000148887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000141520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000124605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000137852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000101270	ENSMUSP00000098828	TRANSLATION	protein_coding	-	CCDS70175.1	5	1263	4	5.27	1.5	306.5	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000126758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036644	Tbc1d9b	ENSMUST00000147628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033880	Lgals3bp	ENSMUST00000144529	ENSMUSP00000120846	TRANSLATION	protein_coding	start	-	5	139	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033880	Lgals3bp	ENSMUST00000043722	ENSMUSP00000035579	TRANSLATION	protein_coding	-	CCDS25701.1	1	577	0	2.73	0.5	158.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000033880	Lgals3bp	ENSMUST00000127054	ENSMUSP00000121024	TRANSLATION	protein_coding	stop	-	5	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033880	Lgals3bp	ENSMUST00000141459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033880	Lgals3bp	ENSMUST00000106290	ENSMUSP00000101897	TRANSLATION	protein_coding	stop	-	3	204	0	2.33	0	106.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090173	Fbxw10	ENSMUST00000127646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090173	Fbxw10	ENSMUST00000036085	ENSMUSP00000046156	TRANSLATION	protein_coding	-	-	5	1030	0	5.676	0	56	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000090173	Fbxw10	ENSMUST00000176577	ENSMUSP00000135870	TRANSLATION	protein_coding	-	CCDS78968.1	1	1025	0	5.61	0.5	56	0	-4,-6	-	-	11.868	ALTERNATIVE:2
ENSMUSG00000090173	Fbxw10	ENSMUST00000177336	ENSMUSP00000135294	TRANSLATION	nonsense_mediated_decay	-	-	1	689	0	4.965	0	56	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090173	Fbxw10	ENSMUST00000175804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090173	Fbxw10	ENSMUST00000150989	ENSMUSP00000117872	TRANSLATION	protein_coding	-	CCDS24833.2	5	1020	0	5.61	1.5	56	0	-4,-6	-	-	11.868	PRINCIPAL:3
ENSMUSG00000042569	Dhrs7b	ENSMUST00000108718	ENSMUSP00000104358	TRANSLATION	protein_coding	-	-	1	308	28	4.24	0	179.1	2	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000042569	Dhrs7b	ENSMUST00000042281	ENSMUSP00000044924	TRANSLATION	protein_coding	-	CCDS24800.1	1	323	28	4.24	1.5	179.1	2	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000020155	Kcnmb1	ENSMUST00000020362	ENSMUSP00000020362	TRANSLATION	protein_coding	-	CCDS24538.1	1	191	0	0	2.7	208.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000005198	Polr2a	ENSMUST00000071213	ENSMUSP00000071200	TRANSLATION	protein_coding	-	-	5	1932	11	28	0	1917.1	0	-4,-6	-	-	16.002	MINOR
ENSMUSG00000005198	Polr2a	ENSMUST00000151586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005198	Polr2a	ENSMUST00000156588	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005198	Polr2a	ENSMUST00000058470	ENSMUSP00000050771	TRANSLATION	protein_coding	-	CCDS70217.1	1	1970	11	29	7.6	1916.4	0	-4,-6	-	-	20.958	PRINCIPAL:1
ENSMUSG00000020524	Gria1	ENSMUST00000173531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020524	Gria1	ENSMUST00000125292	ENSMUSP00000133439	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020524	Gria1	ENSMUST00000036315	ENSMUSP00000044494	TRANSLATION	protein_coding	-	CCDS48800.1	1	907	15	13.95	1.5	589.1	3	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020524	Gria1	ENSMUST00000094179	ENSMUSP00000091731	TRANSLATION	protein_coding	-	CCDS36159.1	1	907	15	13.95	1.5	585.5	3	1,-2	-	-	17.784	PRINCIPAL:3
ENSMUSG00000020524	Gria1	ENSMUST00000151045	ENSMUSP00000117746	TRANSLATION	protein_coding	-	CCDS56770.1	1	838	15	12.5	0.5	570	3	-4,-2	-	-	13.956	MINOR
ENSMUSG00000020770	Unk	ENSMUST00000021116	ENSMUSP00000021116	TRANSLATION	protein_coding	-	CCDS25655.1	1	810	23	6.55	1.5	21.7	0	-3,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000020770	Unk	ENSMUST00000175702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020770	Unk	ENSMUST00000106452	ENSMUSP00000102060	TRANSLATION	protein_coding	-	CCDS70351.1	1	797	23	6.55	0.5	21.7	0	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000020770	Unk	ENSMUST00000176212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020770	Unk	ENSMUST00000150759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020770	Unk	ENSMUST00000140683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020770	Unk	ENSMUST00000176788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049928	Glp2r	ENSMUST00000051765	ENSMUSP00000061560	TRANSLATION	protein_coding	-	CCDS24860.1	1	512	0	9.758	0.5	313.4	5	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000049928	Glp2r	ENSMUST00000021289	ENSMUSP00000021289	TRANSLATION	protein_coding	-	-	1	304	0	5.28	0	181.2	4	-4,-6	-	-	0	MINOR
ENSMUSG00000025144	Cenpx	ENSMUST00000106155	ENSMUSP00000101761	TRANSLATION	protein_coding	-	-	1	121	0	0.33	0	0	0	-4,-1	-	-	0.954	MINOR
ENSMUSG00000025144	Cenpx	ENSMUST00000128543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025144	Cenpx	ENSMUST00000055424	ENSMUSP00000050335	TRANSLATION	protein_coding	-	CCDS49009.1	1	78	0	2.08	7.6	85.4	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000025144	Cenpx	ENSMUST00000106154	ENSMUSP00000101760	TRANSLATION	protein_coding	-	CCDS83947.1	2	114	0	1.75	0.5	82.6	0	-4,-6	-	-	10.848	MINOR
ENSMUSG00000025144	Cenpx	ENSMUST00000026137	ENSMUSP00000026137	TRANSLATION	protein_coding	-	CCDS83948.1	2	107	0	1.705	0.5	55.9	0	-4,-2	-	-	8.85	MINOR
ENSMUSG00000020358	Hnrnpab	ENSMUST00000109103	ENSMUSP00000104731	TRANSLATION	protein_coding	-	CCDS48787.1	1	332	3	3.6	1.5	186.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000020358	Hnrnpab	ENSMUST00000074669	ENSMUSP00000074238	TRANSLATION	protein_coding	-	CCDS24654.1	1	285	3	3.6	1.5	186.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000020358	Hnrnpab	ENSMUST00000101249	ENSMUSP00000098807	TRANSLATION	protein_coding	-	-	1	311	3	3.6	0	186.9	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000094488	Olfr393	ENSMUST00000213365	ENSMUSP00000150031	TRANSLATION	protein_coding	-	CCDS25018.1	5	312	0	0.36	2.7	191	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094488	Olfr393	ENSMUST00000102523	ENSMUSP00000099582	TRANSLATION	protein_coding	-	CCDS25018.1	-	312	0	0.36	2.7	191	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019102	Aldh3a1	ENSMUST00000108716	ENSMUSP00000104356	TRANSLATION	protein_coding	-	CCDS24808.1	1	453	30	9.5	3.9	316.8	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000019102	Aldh3a1	ENSMUST00000019246	ENSMUSP00000019246	TRANSLATION	protein_coding	-	CCDS24808.1	1	453	30	9.5	3.9	316.8	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000019102	Aldh3a1	ENSMUST00000147792	ENSMUSP00000118613	TRANSLATION	protein_coding	stop	-	3	34	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000069631	Strada	ENSMUST00000106867	ENSMUSP00000102480	TRANSLATION	protein_coding	-	-	1	65	0	0	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000069631	Strada	ENSMUST00000007444	ENSMUSP00000007444	TRANSLATION	protein_coding	-	CCDS56816.1	1	431	20	8.5	12.4	124.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000069631	Strada	ENSMUST00000152008	ENSMUSP00000115555	TRANSLATION	protein_coding	stop	-	5	158	16	4	0	53.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069631	Strada	ENSMUST00000103072	ENSMUSP00000099361	TRANSLATION	protein_coding	-	CCDS25550.1	1	394	20	8.5	3.9	124.2	0	-4,-5	-	-	19.016	MINOR
ENSMUSG00000069631	Strada	ENSMUST00000122989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055670	Zzef1	ENSMUST00000152063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055670	Zzef1	ENSMUST00000152481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055670	Zzef1	ENSMUST00000069395	ENSMUSP00000068790	TRANSLATION	protein_coding	-	CCDS36218.1	5	2891	4	0.9	0.5	115.5	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000055670	Zzef1	ENSMUST00000125122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055670	Zzef1	ENSMUST00000172220	ENSMUSP00000130515	TRANSLATION	protein_coding	-	-	5	2924	4	0.9	0	115.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000055670	Zzef1	ENSMUST00000150551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055670	Zzef1	ENSMUST00000207107	ENSMUSP00000147028	TRANSLATION	protein_coding	-	-	5	2953	4	0.9	0.5	115.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000055670	Zzef1	ENSMUST00000145393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044894	Uqcrq	ENSMUST00000109019	ENSMUSP00000104647	TRANSLATION	protein_coding	-	-	2	37	0	1.066	0	32.9	0	0,-3	-	-	4.506	MINOR
ENSMUSG00000044894	Uqcrq	ENSMUST00000109021	ENSMUSP00000104649	TRANSLATION	protein_coding	-	CCDS36151.1	1	82	0	2	8.8	111.1	1	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000044894	Uqcrq	ENSMUST00000061326	ENSMUSP00000053145	TRANSLATION	protein_coding	-	CCDS36151.1	1	82	0	2	8.8	111.1	1	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000044894	Uqcrq	ENSMUST00000156503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034493	4930556J24Rik	ENSMUST00000042344	ENSMUSP00000048953	TRANSLATION	protein_coding	-	-	1	146	7	0	0	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000018583	G3bp1	ENSMUST00000151790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018583	G3bp1	ENSMUST00000018727	ENSMUSP00000018727	TRANSLATION	protein_coding	-	CCDS24714.1	1	465	0	5.05	7.5	162.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018648	Dusp14	ENSMUST00000164891	ENSMUSP00000130624	TRANSLATION	protein_coding	-	CCDS25182.1	1	198	9	2	12.8	126.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000018648	Dusp14	ENSMUST00000100705	ENSMUSP00000098271	TRANSLATION	protein_coding	-	CCDS25182.1	1	198	9	2	12.8	126.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000018648	Dusp14	ENSMUST00000138208	ENSMUSP00000120773	TRANSLATION	protein_coding	stop	-	2	78	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018648	Dusp14	ENSMUST00000018792	ENSMUSP00000018792	TRANSLATION	protein_coding	-	CCDS25182.1	2	198	9	2	12.8	126.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000018648	Dusp14	ENSMUST00000108101	ENSMUSP00000103736	TRANSLATION	protein_coding	-	CCDS25182.1	1	198	9	2	12.8	126.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000019761	Krt10	ENSMUST00000103131	ENSMUSP00000099420	TRANSLATION	protein_coding	-	CCDS25380.1	1	561	0	4.285	0.5	389.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000019761	Krt10	ENSMUST00000211768	ENSMUSP00000148044	TRANSLATION	protein_coding	start	-	3	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000165620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020863	Luc7l3	ENSMUST00000021226	ENSMUSP00000021226	TRANSLATION	protein_coding	-	CCDS25252.1	1	491	8	0	6.3	304.5	0	-4,-5	-	-	13.796	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000132623	ENSMUSP00000131166	TRANSLATION	protein_coding	start	-	5	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000171033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020863	Luc7l3	ENSMUST00000107820	ENSMUSP00000103450	TRANSLATION	protein_coding	-	-	5	432	8	0	12.8	304.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020863	Luc7l3	ENSMUST00000107822	ENSMUSP00000103452	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000138369	ENSMUSP00000128571	TRANSLATION	nonsense_mediated_decay	start	-	3	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000107821	ENSMUSP00000103451	TRANSLATION	protein_coding	-	-	5	432	8	0	12.8	304.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020863	Luc7l3	ENSMUST00000166312	ENSMUSP00000129919	TRANSLATION	protein_coding	-	-	1	477	8	0	1	304.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000020863	Luc7l3	ENSMUST00000135311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057286	St6galnac2	ENSMUST00000145441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057286	St6galnac2	ENSMUST00000079545	ENSMUSP00000078501	TRANSLATION	protein_coding	-	CCDS36379.1	1	373	10	2.94	1.5	229.1	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000057286	St6galnac2	ENSMUST00000129236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057286	St6galnac2	ENSMUST00000135771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057286	St6galnac2	ENSMUST00000123236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010025	Aldh3a2	ENSMUST00000208086	ENSMUSP00000147199	TRANSLATION	protein_coding	start	-	5	128	1	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010025	Aldh3a2	ENSMUST00000074127	ENSMUSP00000073764	TRANSLATION	protein_coding	-	CCDS24809.1	1	484	30	8.83	5.1	299.2	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000010025	Aldh3a2	ENSMUST00000149298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010025	Aldh3a2	ENSMUST00000128991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010025	Aldh3a2	ENSMUST00000066277	ENSMUSP00000067767	TRANSLATION	protein_coding	-	-	2	532	30	8.83	0	299.2	0	-4,0	-	-	18	MINOR
ENSMUSG00000010025	Aldh3a2	ENSMUST00000147291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010025	Aldh3a2	ENSMUST00000141368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010025	Aldh3a2	ENSMUST00000108715	ENSMUSP00000104355	TRANSLATION	protein_coding	-	-	1	487	30	8.83	0.5	299.2	0	-4,0	-	-	18	MINOR
ENSMUSG00000045545	Krt14	ENSMUST00000137265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045545	Krt14	ENSMUST00000007272	ENSMUSP00000007272	TRANSLATION	protein_coding	-	CCDS25413.1	1	484	0	4.32	0.5	399.4	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000069818	Olfr390	ENSMUST00000206815	ENSMUSP00000146162	TRANSLATION	protein_coding	stop	-	3	155	0	0.6	0	90.4	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000069818	Olfr390	ENSMUST00000092919	ENSMUSP00000090598	TRANSLATION	protein_coding	-	CCDS25016.1	-	311	0	0.9	5.1	206.3	8	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069818	Olfr390	ENSMUST00000120081	ENSMUSP00000113472	TRANSLATION	protein_coding	-	CCDS25016.1	2	311	0	0.9	5.1	206.3	8	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069818	Olfr390	ENSMUST00000215161	ENSMUSP00000148992	TRANSLATION	protein_coding	-	CCDS25016.1	5	311	0	0.9	5.1	206.3	8	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020897	Aurkb	ENSMUST00000140531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020897	Aurkb	ENSMUST00000139457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020897	Aurkb	ENSMUST00000108666	ENSMUSP00000104306	TRANSLATION	protein_coding	-	CCDS24877.1	5	345	18	5.3	1.5	238.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020897	Aurkb	ENSMUST00000021277	ENSMUSP00000021277	TRANSLATION	protein_coding	-	CCDS24877.1	1	345	18	5.3	1.5	238.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020897	Aurkb	ENSMUST00000126576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020897	Aurkb	ENSMUST00000156373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020897	Aurkb	ENSMUST00000149018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020897	Aurkb	ENSMUST00000139594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013483	Card14	ENSMUST00000151052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013483	Card14	ENSMUST00000147167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013483	Card14	ENSMUST00000053245	ENSMUSP00000053665	TRANSLATION	protein_coding	-	CCDS25715.1	1	999	0	4.12	1.5	80	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000013483	Card14	ENSMUST00000106250	ENSMUSP00000101857	TRANSLATION	protein_coding	-	CCDS25715.1	5	999	0	4.12	1.5	80	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018677	Slc25a39	ENSMUST00000130436	ENSMUSP00000115087	TRANSLATION	protein_coding	stop	-	3	178	0	3.164	0	77	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000123688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018677	Slc25a39	ENSMUST00000142097	ENSMUSP00000114365	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	0.9	0	34.2	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000107098	ENSMUSP00000102715	TRANSLATION	protein_coding	-	-	5	351	0	5.682	6	208.4	8	-4,-6	-	-	14.229	ALTERNATIVE:1
ENSMUSG00000018677	Slc25a39	ENSMUST00000153395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018677	Slc25a39	ENSMUST00000147860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018677	Slc25a39	ENSMUST00000155104	ENSMUSP00000115445	TRANSLATION	protein_coding	stop	-	2	266	0	3.877	0	139.3	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000147160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018677	Slc25a39	ENSMUST00000128825	ENSMUSP00000121790	TRANSLATION	protein_coding	start	-	3	116	0	1.678	0	31	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000124755	ENSMUSP00000120021	TRANSLATION	protein_coding	stop	-	3	152	0	1.65	0	76.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000018821	ENSMUSP00000018821	TRANSLATION	protein_coding	-	CCDS25498.1	1	359	0	5.682	7.5	209.7	8	-4,-6	-	-	15	PRINCIPAL:2
ENSMUSG00000018677	Slc25a39	ENSMUST00000134669	ENSMUSP00000114481	TRANSLATION	nonsense_mediated_decay	-	-	5	136	0	0.9	0	34.2	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000141535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018677	Slc25a39	ENSMUST00000154001	ENSMUSP00000116336	TRANSLATION	protein_coding	stop	-	5	175	0	3.164	0	77	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018677	Slc25a39	ENSMUST00000149777	ENSMUSP00000115365	TRANSLATION	protein_coding	stop	-	5	219	0	3.644	0	111.5	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000001103	Sebox	ENSMUST00000125670	ENSMUSP00000129606	TRANSLATION	protein_coding	-	-	1	56	0	0.33	0	0	0	-4,-6	-	-	1.194	MINOR
ENSMUSG00000001103	Sebox	ENSMUST00000001130	ENSMUSP00000001130	TRANSLATION	protein_coding	-	CCDS25107.1	1	190	0	1.66	1.5	74	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078255	Krtap9-5	ENSMUST00000105052	ENSMUSP00000100673	TRANSLATION	protein_coding	-	CCDS48926.1	-	358	0	0	0.5	119.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000017316	Ppy	ENSMUST00000170554	ENSMUSP00000126798	TRANSLATION	protein_coding	-	CCDS25486.1	1	100	0	1	1.5	57.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000017316	Ppy	ENSMUST00000017460	ENSMUSP00000017460	TRANSLATION	protein_coding	-	CCDS25486.1	1	100	0	1	1.5	57.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000050106	Tmc8	ENSMUST00000106334	ENSMUSP00000101941	TRANSLATION	protein_coding	-	CCDS56824.1	1	723	0	0	1.5	134.9	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000050106	Tmc8	ENSMUST00000127080	ENSMUSP00000115270	TRANSLATION	protein_coding	stop	-	3	166	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000050106	Tmc8	ENSMUST00000050874	ENSMUSP00000051878	TRANSLATION	protein_coding	-	CCDS25689.1	1	722	0	0	1.5	134.9	9	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000050106	Tmc8	ENSMUST00000117781	ENSMUSP00000113570	TRANSLATION	protein_coding	-	CCDS56825.1	1	722	0	0	1.5	134.9	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000050106	Tmc8	ENSMUST00000119455	ENSMUSP00000113628	TRANSLATION	protein_coding	-	CCDS56824.1	1	723	0	0	1.5	134.9	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000050106	Tmc8	ENSMUST00000156458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099102	Gm11983	ENSMUST00000184257	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000099102	Gm11983	ENSMUST00000184940	ENSMUSP00000139301	TRANSLATION	protein_coding	-	-	-	105	0	0.4	0	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041287	Sox15	ENSMUST00000047373	ENSMUSP00000048524	TRANSLATION	protein_coding	-	CCDS24902.1	1	231	0	0.8	2.9	93.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020364	Zfp354a	ENSMUST00000109119	ENSMUSP00000104747	TRANSLATION	protein_coding	-	CCDS83803.1	5	573	52	1.6	1.5	360.9	0	-4,-5	-	-	17.79	ALTERNATIVE:2
ENSMUSG00000020364	Zfp354a	ENSMUST00000020628	ENSMUSP00000020628	TRANSLATION	protein_coding	-	CCDS24648.1	1	572	52	1.6	1.5	364.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000020364	Zfp354a	ENSMUST00000102766	ENSMUSP00000099827	TRANSLATION	protein_coding	-	CCDS24648.1	1	572	52	1.6	1.5	364.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000020364	Zfp354a	ENSMUST00000156914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020364	Zfp354a	ENSMUST00000109122	ENSMUSP00000104750	TRANSLATION	protein_coding	-	CCDS83802.1	1	571	52	1.6	0.5	364.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000069893	9930111J21Rik1	ENSMUST00000097494	ENSMUSP00000095102	TRANSLATION	protein_coding	-	CCDS48780.1	5	844	28	2.8	0.5	917.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069893	9930111J21Rik1	ENSMUST00000141200	ENSMUSP00000121432	TRANSLATION	protein_coding	stop	-	1	125	8	1	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069893	9930111J21Rik1	ENSMUST00000093153	ENSMUSP00000090840	TRANSLATION	protein_coding	-	-	1	467	15	1.8	0.5	413.6	0	-4,-5	-	-	3.858	MINOR
ENSMUSG00000043419	Rnf227	ENSMUST00000129321	ENSMUSP00000146712	TRANSLATION	protein_coding	-	-	1	190	8	0	1	173.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043419	Rnf227	ENSMUST00000218008	ENSMUSP00000151352	TRANSLATION	protein_coding	-	-	1	74	0	0	0	139.6	0	-4,-5	-	-	3.96	MINOR
ENSMUSG00000043419	Rnf227	ENSMUST00000151617	ENSMUSP00000147159	TRANSLATION	protein_coding	-	-	3	48	0	0	0	32.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020366	Mapk9	ENSMUST00000164643	ENSMUSP00000132864	TRANSLATION	protein_coding	-	CCDS48783.1	5	381	21	9	14.8	215.4	0	-4,-5	-	-	19.96	MINOR
ENSMUSG00000020366	Mapk9	ENSMUST00000178543	ENSMUSP00000136977	TRANSLATION	protein_coding	-	CCDS48782.1	5	423	21	10	12.8	216.1	0	-4,-5	-	-	21.42	ALTERNATIVE:1
ENSMUSG00000020366	Mapk9	ENSMUST00000043321	ENSMUSP00000042744	TRANSLATION	protein_coding	-	CCDS48782.1	1	423	21	10	12.8	216.1	0	-4,-5	-	-	21.42	ALTERNATIVE:1
ENSMUSG00000020366	Mapk9	ENSMUST00000109178	ENSMUSP00000104807	TRANSLATION	protein_coding	-	CCDS48783.1	1	381	21	9	14.8	215.4	0	-4,-5	-	-	19.96	MINOR
ENSMUSG00000020366	Mapk9	ENSMUST00000109179	ENSMUSP00000104808	TRANSLATION	protein_coding	-	CCDS24624.1	5	381	21	9	14.8	216.1	0	-4,-5	-	-	20.002	MINOR
ENSMUSG00000020366	Mapk9	ENSMUST00000148274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020366	Mapk9	ENSMUST00000151695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020366	Mapk9	ENSMUST00000144857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020366	Mapk9	ENSMUST00000102778	ENSMUSP00000099839	TRANSLATION	protein_coding	-	CCDS24624.1	1	381	21	9	14.8	216.1	0	-4,-5	-	-	20.002	MINOR
ENSMUSG00000020366	Mapk9	ENSMUST00000020634	ENSMUSP00000020634	TRANSLATION	protein_coding	-	CCDS24623.1	1	423	21	10	12.8	215.4	0	-4,-5	-	-	21.378	PRINCIPAL:3
ENSMUSG00000017724	Etv4	ENSMUST00000129995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000132040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000131117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000017868	ENSMUSP00000017868	TRANSLATION	protein_coding	-	CCDS83903.1	5	486	0	3	7.5	520.2	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000017724	Etv4	ENSMUST00000137179	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000131862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000129160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000149099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000107176	ENSMUSP00000102794	TRANSLATION	protein_coding	-	CCDS83902.1	1	480	0	3	2.9	504.2	0	-4,-7	-	-	11.916	MINOR
ENSMUSG00000017724	Etv4	ENSMUST00000140970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017724	Etv4	ENSMUST00000164750	ENSMUSP00000129261	TRANSLATION	protein_coding	-	CCDS48937.1	1	485	0	3	7.5	512.4	0	-4,-7	-	-	14.532	PRINCIPAL:3
ENSMUSG00000017724	Etv4	ENSMUST00000154512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011877	Git1	ENSMUST00000037285	ENSMUSP00000037210	TRANSLATION	protein_coding	-	CCDS25080.1	1	770	4	8.35	6.3	485.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000011877	Git1	ENSMUST00000100812	ENSMUSP00000098375	TRANSLATION	protein_coding	-	-	5	761	4	8.35	5.3	485.3	0	-4,-5	-	-	17.622	ALTERNATIVE:1
ENSMUSG00000011877	Git1	ENSMUST00000152428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011877	Git1	ENSMUST00000128796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011877	Git1	ENSMUST00000139410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011877	Git1	ENSMUST00000127302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018398	Septin8	ENSMUST00000142800	ENSMUSP00000124057	TRANSLATION	protein_coding	stop	-	5	51	0	1	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018398	Septin8	ENSMUST00000120878	ENSMUSP00000113775	TRANSLATION	protein_coding	-	-	5	440	14	8.495	6.3	317.8	0	-4,-5	-	-	18.876	MINOR
ENSMUSG00000018398	Septin8	ENSMUST00000121334	ENSMUSP00000113038	TRANSLATION	protein_coding	-	CCDS83805.1	5	484	14	8.495	7.5	329.4	0	-4,-5	-	-	19.924	MINOR
ENSMUSG00000018398	Septin8	ENSMUST00000147912	ENSMUSP00000120427	TRANSLATION	protein_coding	-	-	5	442	14	8.495	6.3	329.4	0	-4,-5	-	-	19.572	MINOR
ENSMUSG00000018398	Septin8	ENSMUST00000117061	ENSMUSP00000112920	TRANSLATION	protein_coding	-	CCDS48794.1	1	430	14	8.495	14.5	329.4	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000018398	Septin8	ENSMUST00000145927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018398	Septin8	ENSMUST00000108987	ENSMUSP00000104615	TRANSLATION	protein_coding	-	CCDS56768.1	1	429	14	8.495	14.5	329.4	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000019373	Cops3	ENSMUST00000019517	ENSMUSP00000019517	TRANSLATION	protein_coding	-	CCDS24778.1	1	423	0	10.83	19.5	69.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000019373	Cops3	ENSMUST00000126489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019373	Cops3	ENSMUST00000133652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019373	Cops3	ENSMUST00000156837	ENSMUSP00000117288	TRANSLATION	protein_coding	start/stop	-	5	244	0	5.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019373	Cops3	ENSMUST00000124101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019373	Cops3	ENSMUST00000141415	ENSMUSP00000120305	TRANSLATION	protein_coding	stop	-	2	106	0	1.875	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019373	Cops3	ENSMUST00000136901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019373	Cops3	ENSMUST00000130027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001507	Itga3	ENSMUST00000107739	ENSMUSP00000103368	TRANSLATION	protein_coding	-	CCDS83877.1	1	1022	18	10.754	0.5	407.7	2	-4,-6	-	-	17.76	ALTERNATIVE:2
ENSMUSG00000001507	Itga3	ENSMUST00000141693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001507	Itga3	ENSMUST00000001548	ENSMUSP00000001548	TRANSLATION	protein_coding	-	CCDS25271.1	1	1053	18	10.874	2.9	407.7	2	3,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000001507	Itga3	ENSMUST00000120375	ENSMUSP00000113556	TRANSLATION	protein_coding	-	CCDS83878.1	1	1068	18	10.874	1.7	407.7	2	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000001507	Itga3	ENSMUST00000140342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001507	Itga3	ENSMUST00000145671	ENSMUSP00000115970	TRANSLATION	protein_coding	start/stop	-	3	183	0	1.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020457	Drg1	ENSMUST00000132159	ENSMUSP00000116520	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020457	Drg1	ENSMUST00000125424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020457	Drg1	ENSMUST00000159304	ENSMUSP00000125536	TRANSLATION	nonsense_mediated_decay	start	-	5	69	0	1.7	0	43.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020457	Drg1	ENSMUST00000139430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020457	Drg1	ENSMUST00000142605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020457	Drg1	ENSMUST00000020741	ENSMUSP00000020741	TRANSLATION	protein_coding	-	CCDS24355.1	1	367	14	9.5	13.7	308.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020457	Drg1	ENSMUST00000166162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009900	Wnt3a	ENSMUST00000010044	ENSMUSP00000010044	TRANSLATION	protein_coding	-	CCDS24766.1	1	352	0	2.24	10.5	402.9	0	2,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000020886	Dlg4	ENSMUST00000108588	ENSMUSP00000104229	TRANSLATION	protein_coding	-	CCDS36202.1	1	724	19	18.64	6.3	634.8	0	-4,-5	-	-	19.586	PRINCIPAL:3
ENSMUSG00000020886	Dlg4	ENSMUST00000108589	ENSMUSP00000104230	TRANSLATION	protein_coding	-	-	5	767	19	18.51	2.4	634.8	0	0,-3	-	-	17.856	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000018700	ENSMUSP00000018700	TRANSLATION	protein_coding	-	-	1	664	19	16.73	6.3	592.3	0	-4,-5	-	-	13.214	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000231415	ENSMUSP00000156345	TRANSLATION	protein_coding	-	CCDS48829.1	-	721	19	18.64	6.3	641.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000020886	Dlg4	ENSMUST00000231221	ENSMUSP00000155975	TRANSLATION	protein_coding	-	-	-	273	6	8.23	0	208.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000132597	ENSMUSP00000114165	TRANSLATION	protein_coding	stop	-	5	242	6	7.48	0	231.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000232659	ENSMUSP00000156267	TRANSLATION	protein_coding	start/stop	-	-	130	3	3.26	0	103.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000232115	ENSMUSP00000156246	TRANSLATION	protein_coding	stop	-	-	198	6	6.32	0	158.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000232002	ENSMUSP00000156019	TRANSLATION	protein_coding	-	-	-	254	6	7.48	0	199.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000232266	ENSMUSP00000156189	TRANSLATION	protein_coding	stop	-	-	205	6	6.4	0	201.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000135916	ENSMUSP00000135994	TRANSLATION	protein_coding	stop	-	2	51	3	1.33	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000131497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020886	Dlg4	ENSMUST00000133140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020886	Dlg4	ENSMUST00000143920	ENSMUSP00000136419	TRANSLATION	protein_coding	stop	-	2	115	3	3.49	0	82.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000108586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020886	Dlg4	ENSMUST00000231506	ENSMUSP00000155973	TRANSLATION	protein_coding	-	-	-	764	19	18.51	2.4	641.7	0	0,-3	-	-	18.27	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000138004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020886	Dlg4	ENSMUST00000124568	ENSMUSP00000121053	TRANSLATION	protein_coding	stop	-	3	130	3	3.71	0	99.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000123687	ENSMUSP00000134545	TRANSLATION	nonsense_mediated_decay	-	-	5	668	15	15.76	0	526.4	0	0,-3	-	-	-1	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000231628	ENSMUSP00000156059	TRANSLATION	protein_coding	-	-	-	664	19	16.73	6.3	592.3	0	-4,-5	-	-	13.214	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000231452	ENSMUSP00000155942	TRANSLATION	protein_coding	-	-	-	664	19	16.73	6.3	592.3	0	-4,-5	-	-	13.214	MINOR
ENSMUSG00000020886	Dlg4	ENSMUST00000134376	ENSMUSP00000115206	TRANSLATION	protein_coding	stop	-	5	238	6	6.67	0	181.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000078694	ENSMUSP00000077760	TRANSLATION	protein_coding	-	CCDS25344.1	1	194	0	0	0.5	179	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000133700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000132443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000137634	ENSMUSP00000123528	TRANSLATION	protein_coding	-	CCDS83889.1	1	158	0	0	0.5	87.9	0	-4,-5	-	-	0.534	MINOR
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000152525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000150762	ENSMUSP00000121147	TRANSLATION	protein_coding	-	CCDS83889.1	1	158	0	0	0.5	87.9	0	-4,-5	-	-	0.534	MINOR
ENSMUSG00000061718	Ppp1r1b	ENSMUST00000147415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038453	Srcin1	ENSMUST00000107596	ENSMUSP00000103222	TRANSLATION	protein_coding	-	CCDS36294.1	1	1217	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000038453	Srcin1	ENSMUST00000142123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038453	Srcin1	ENSMUST00000107590	ENSMUSP00000103216	TRANSLATION	protein_coding	-	-	5	1198	0	0	1.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000038453	Srcin1	ENSMUST00000126287	ENSMUSP00000116444	TRANSLATION	protein_coding	stop	-	5	473	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038453	Srcin1	ENSMUST00000145845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038453	Srcin1	ENSMUST00000207653	ENSMUSP00000146591	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038453	Srcin1	ENSMUST00000238597	ENSMUSP00000158716	TRANSLATION	protein_coding	-	-	-	1205	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038453	Srcin1	ENSMUST00000238314	ENSMUSP00000158711	TRANSLATION	protein_coding	-	-	-	1225	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038453	Srcin1	ENSMUST00000238342	ENSMUSP00000158676	TRANSLATION	protein_coding	-	-	-	1357	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038453	Srcin1	ENSMUST00000238233	ENSMUSP00000158656	TRANSLATION	protein_coding	-	-	-	1055	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000038453	Srcin1	ENSMUST00000107593	ENSMUSP00000103219	TRANSLATION	protein_coding	-	-	5	1174	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000002580	Mien1	ENSMUST00000002655	ENSMUSP00000002655	TRANSLATION	protein_coding	-	CCDS25350.1	1	115	0	3.5	6.3	64.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000062511	4930512M02Rik	ENSMUST00000149910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062511	4930512M02Rik	ENSMUST00000081896	ENSMUSP00000080571	TRANSLATION	protein_coding	-	CCDS78919.1	1	218	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000040365	Trim41	ENSMUST00000047145	ENSMUSP00000037055	TRANSLATION	protein_coding	-	CCDS36138.1	1	630	16	4.294	0.5	202	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040365	Trim41	ENSMUST00000140800	ENSMUSP00000121705	TRANSLATION	protein_coding	stop	-	3	161	8	2.05	0	42.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040365	Trim41	ENSMUST00000131888	ENSMUSP00000119707	TRANSLATION	protein_coding	start	-	3	126	0	2.214	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040365	Trim41	ENSMUST00000138019	ENSMUSP00000118789	TRANSLATION	protein_coding	start/stop	-	3	157	10	1	0	42.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013643	Lypd8	ENSMUST00000108826	ENSMUSP00000104454	TRANSLATION	protein_coding	-	CCDS36163.1	1	255	0	0	0.5	33.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000013643	Lypd8	ENSMUST00000013787	ENSMUSP00000013787	TRANSLATION	protein_coding	-	CCDS36163.1	1	255	0	0	0.5	33.5	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000044034	Npb	ENSMUST00000061309	ENSMUSP00000050092	TRANSLATION	protein_coding	-	CCDS83945.1	3	107	0	0	0.5	101.7	0	4,-1	-	-	3.084	MINOR
ENSMUSG00000044034	Npb	ENSMUST00000106194	ENSMUSP00000101800	TRANSLATION	protein_coding	-	CCDS83944.1	2	115	0	0	1.5	139.1	0	4,-1	-	-	5.328	ALTERNATIVE:2
ENSMUSG00000044034	Npb	ENSMUST00000106195	ENSMUSP00000101801	TRANSLATION	protein_coding	-	CCDS25746.1	1	119	0	0	1.5	150.3	0	4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000037926	Ssh2	ENSMUST00000180394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037926	Ssh2	ENSMUST00000037912	ENSMUSP00000042625	TRANSLATION	protein_coding	-	CCDS25076.1	1	1423	8	3.3	0.5	155	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000037926	Ssh2	ENSMUST00000181283	ENSMUSP00000137933	TRANSLATION	protein_coding	-	CCDS70248.1	1	1429	8	3.3	1.5	155	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000037926	Ssh2	ENSMUST00000156488	ENSMUSP00000119681	TRANSLATION	protein_coding	stop	-	5	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037926	Ssh2	ENSMUST00000180554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037926	Ssh2	ENSMUST00000127890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037926	Ssh2	ENSMUST00000180545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037750	Fam222b	ENSMUST00000100782	ENSMUSP00000126620	TRANSLATION	protein_coding	-	CCDS83851.1	1	434	0	0	5.1	602.3	0	-4,-7	-	-	2	MINOR
ENSMUSG00000037750	Fam222b	ENSMUST00000155571	ENSMUSP00000121832	TRANSLATION	protein_coding	-	CCDS25089.1	1	562	0	0	5.1	853.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037750	Fam222b	ENSMUST00000073705	ENSMUSP00000073384	TRANSLATION	protein_coding	-	CCDS25089.1	1	562	0	0	5.1	853.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037958	Nsrp1	ENSMUST00000102494	ENSMUSP00000099552	TRANSLATION	protein_coding	-	CCDS25075.1	1	542	0	0	0.5	127.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037958	Nsrp1	ENSMUST00000134685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037958	Nsrp1	ENSMUST00000127758	ENSMUSP00000118119	TRANSLATION	protein_coding	stop	-	5	78	0	0	0	27.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020413	Hus1	ENSMUST00000129115	ENSMUSP00000114339	TRANSLATION	nonsense_mediated_decay	-	-	1	281	0	7	8.8	288.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020413	Hus1	ENSMUST00000152890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020413	Hus1	ENSMUST00000146002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020413	Hus1	ENSMUST00000127578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020413	Hus1	ENSMUST00000020683	ENSMUSP00000020683	TRANSLATION	protein_coding	-	CCDS24429.1	1	281	0	7	8.8	288.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020413	Hus1	ENSMUST00000139877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003119	Cdk12	ENSMUST00000107538	ENSMUSP00000103162	TRANSLATION	protein_coding	-	CCDS48901.1	1	1484	15	8.05	1.5	248.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000003119	Cdk12	ENSMUST00000107539	ENSMUSP00000103163	TRANSLATION	protein_coding	-	CCDS48902.1	5	1475	15	8.05	1.5	248.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000003119	Cdk12	ENSMUST00000145113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003119	Cdk12	ENSMUST00000125152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003119	Cdk12	ENSMUST00000003203	ENSMUSP00000003203	TRANSLATION	protein_coding	-	CCDS25342.1	1	1258	15	8.05	1.5	248.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000003119	Cdk12	ENSMUST00000147441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034201	Gas2l1	ENSMUST00000151936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034201	Gas2l1	ENSMUST00000152257	ENSMUSP00000121993	TRANSLATION	protein_coding	stop	-	2	195	0	0	0	57.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034201	Gas2l1	ENSMUST00000156196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034201	Gas2l1	ENSMUST00000037146	ENSMUSP00000043709	TRANSLATION	protein_coding	-	CCDS48745.1	1	344	4	1.58	0.5	168.9	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000034201	Gas2l1	ENSMUST00000056649	ENSMUSP00000050275	TRANSLATION	protein_coding	-	CCDS36101.1	5	678	4	1.58	1.5	168.9	0	-4,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000034201	Gas2l1	ENSMUST00000122886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034201	Gas2l1	ENSMUST00000109895	ENSMUSP00000105521	TRANSLATION	protein_coding	-	CCDS36101.1	1	678	4	1.58	1.5	168.9	0	-4,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000020850	Prpf8	ENSMUST00000131283	ENSMUSP00000115635	TRANSLATION	protein_coding	stop	-	1	1044	0	19	0	162.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020850	Prpf8	ENSMUST00000102510	ENSMUSP00000099568	TRANSLATION	protein_coding	-	CCDS25048.1	5	2335	0	42	15	951.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020850	Prpf8	ENSMUST00000133995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020850	Prpf8	ENSMUST00000018449	ENSMUSP00000018449	TRANSLATION	protein_coding	-	CCDS25048.1	1	2335	0	42	15	951.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000005417	Mprip	ENSMUST00000133861	ENSMUSP00000119562	TRANSLATION	protein_coding	start	-	5	1010	9	2.13	0	57.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005417	Mprip	ENSMUST00000132620	ENSMUSP00000119422	TRANSLATION	protein_coding	start	-	5	848	9	2.13	0	57.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005417	Mprip	ENSMUST00000138234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005417	Mprip	ENSMUST00000116371	ENSMUSP00000112072	TRANSLATION	protein_coding	-	CCDS24775.1	1	1024	9	2.13	0.5	94.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000005417	Mprip	ENSMUST00000072031	ENSMUSP00000071914	TRANSLATION	protein_coding	-	CCDS24774.1	1	1037	9	2.13	0.5	94.5	0	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000005417	Mprip	ENSMUST00000156111	ENSMUSP00000114446	TRANSLATION	protein_coding	start	-	1	498	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005417	Mprip	ENSMUST00000153531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005417	Mprip	ENSMUST00000066330	ENSMUSP00000071081	TRANSLATION	protein_coding	-	-	5	2269	9	2.13	0.5	94.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000005417	Mprip	ENSMUST00000108751	ENSMUSP00000104382	TRANSLATION	protein_coding	-	-	1	986	9	2.13	0	94.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000044502	Bod1	ENSMUST00000109415	ENSMUSP00000105042	TRANSLATION	protein_coding	-	CCDS24513.1	2	173	0	0	0.5	92.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044502	Bod1	ENSMUST00000058060	ENSMUSP00000056417	TRANSLATION	protein_coding	-	CCDS24513.1	1	173	0	0	0.5	92.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000009073	Nf2	ENSMUST00000053079	ENSMUSP00000055033	TRANSLATION	protein_coding	-	CCDS56757.1	1	591	0	13.58	7.5	440.1	0	-4,-1	-	-	12.372	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000056290	ENSMUSP00000055061	TRANSLATION	protein_coding	-	CCDS56757.1	1	591	0	13.58	7.5	440.1	0	-4,-1	-	-	12.372	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000167480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009073	Nf2	ENSMUST00000109908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009073	Nf2	ENSMUST00000155600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009073	Nf2	ENSMUST00000137926	ENSMUSP00000116505	TRANSLATION	protein_coding	start/stop	-	3	159	0	4.75	0	117.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000093374	ENSMUSP00000091066	TRANSLATION	protein_coding	start	-	5	521	0	11.58	0	396.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000172305	ENSMUSP00000130263	TRANSLATION	protein_coding	stop	-	3	131	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000109910	ENSMUSP00000105536	TRANSLATION	protein_coding	-	CCDS24391.1	1	596	0	14.08	7.5	467.2	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000009073	Nf2	ENSMUST00000141342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009073	Nf2	ENSMUST00000124878	ENSMUSP00000132184	TRANSLATION	nonsense_mediated_decay	start	-	5	83	0	2.33	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000164190	ENSMUSP00000129388	TRANSLATION	protein_coding	stop	-	5	251	0	7.33	0	155	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000009073	Nf2	ENSMUST00000152656	ENSMUSP00000128494	TRANSLATION	nonsense_mediated_decay	start	-	5	140	0	3.75	0	89.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020390	Ube2b	ENSMUST00000109086	ENSMUSP00000104714	TRANSLATION	protein_coding	-	CCDS24664.1	2	152	0	4.33	19.5	180.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020390	Ube2b	ENSMUST00000147833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020390	Ube2b	ENSMUST00000124699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020390	Ube2b	ENSMUST00000020657	ENSMUSP00000020657	TRANSLATION	protein_coding	-	CCDS24664.1	1	152	0	4.33	19.5	180.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034936	Arl4d	ENSMUST00000039388	ENSMUSP00000035918	TRANSLATION	protein_coding	-	CCDS36336.1	1	201	18	0.8	20.2	194.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000060216	Arrb2	ENSMUST00000084954	ENSMUSP00000082018	TRANSLATION	protein_coding	-	-	5	406	19	11.405	0	192	0	-4,-5	-	-	14.274	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000102564	ENSMUSP00000099624	TRANSLATION	protein_coding	-	CCDS24946.1	1	410	19	12.07	6.3	231.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000060216	Arrb2	ENSMUST00000102563	ENSMUSP00000099623	TRANSLATION	protein_coding	-	CCDS24946.1	1	410	19	12.07	6.3	231.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000060216	Arrb2	ENSMUST00000128748	ENSMUSP00000134349	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0.33	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000150076	ENSMUSP00000136601	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000138006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060216	Arrb2	ENSMUST00000124943	ENSMUSP00000136978	TRANSLATION	protein_coding	stop	-	3	83	6	2.58	0	66.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000079056	ENSMUSP00000078065	TRANSLATION	protein_coding	-	CCDS70226.1	1	421	19	11.905	2.9	231.9	0	-4,-6	-	-	18.386	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000125441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060216	Arrb2	ENSMUST00000144454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060216	Arrb2	ENSMUST00000108568	ENSMUSP00000104208	TRANSLATION	protein_coding	-	CCDS70226.1	1	421	19	11.905	2.9	231.9	0	-4,-6	-	-	18.386	MINOR
ENSMUSG00000060216	Arrb2	ENSMUST00000143232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060216	Arrb2	ENSMUST00000124112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018921	Pelp1	ENSMUST00000019065	ENSMUSP00000019065	TRANSLATION	protein_coding	-	CCDS24945.1	1	1123	0	0	0.5	241.9	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018921	Pelp1	ENSMUST00000135148	ENSMUSP00000134014	TRANSLATION	protein_coding	-	-	1	164	0	0	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000020838	Slc6a4	ENSMUST00000108402	ENSMUSP00000104039	TRANSLATION	protein_coding	-	CCDS25074.1	5	630	10	12.55	7.5	849.3	12	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020838	Slc6a4	ENSMUST00000129572	ENSMUSP00000115264	TRANSLATION	protein_coding	stop	-	5	158	5	1.8	0	238.2	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000020838	Slc6a4	ENSMUST00000021195	ENSMUSP00000021195	TRANSLATION	protein_coding	-	CCDS25074.1	1	630	10	12.55	7.5	849.3	12	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020838	Slc6a4	ENSMUST00000137819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069919	Hba-a1	ENSMUST00000093209	ENSMUSP00000090897	TRANSLATION	protein_coding	-	CCDS24523.1	1	142	32	3	11.6	99.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000069919	Hba-a1	ENSMUST00000142555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057654	Olfr328	ENSMUST00000108824	ENSMUSP00000104452	TRANSLATION	protein_coding	-	CCDS24734.1	3	310	0	0.42	1.5	152	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057654	Olfr328	ENSMUST00000215717	ENSMUSP00000149506	TRANSLATION	protein_coding	-	CCDS24734.1	5	310	0	0.42	1.5	152	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057654	Olfr328	ENSMUST00000073933	ENSMUSP00000073588	TRANSLATION	protein_coding	-	CCDS24734.1	-	310	0	0.42	1.5	152	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057654	Olfr328	ENSMUST00000216725	ENSMUSP00000150086	TRANSLATION	protein_coding	-	CCDS24734.1	5	310	0	0.42	1.5	152	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043372	Hexim2	ENSMUST00000124928	ENSMUSP00000116991	TRANSLATION	protein_coding	stop	-	1	174	0	0	0	101.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043372	Hexim2	ENSMUST00000107037	ENSMUSP00000102652	TRANSLATION	protein_coding	-	CCDS25514.1	2	313	0	0.8	1.5	157.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043372	Hexim2	ENSMUST00000062530	ENSMUSP00000053678	TRANSLATION	protein_coding	-	CCDS25514.1	1	313	0	0.8	1.5	157.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043372	Hexim2	ENSMUST00000150275	ENSMUSP00000122591	TRANSLATION	protein_coding	stop	-	5	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043372	Hexim2	ENSMUST00000130341	ENSMUSP00000114405	TRANSLATION	protein_coding	stop	-	1	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000141859	ENSMUSP00000120341	TRANSLATION	nonsense_mediated_decay	-	-	1	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000127657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020289	Nprl3	ENSMUST00000123411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020289	Nprl3	ENSMUST00000109389	ENSMUSP00000105016	TRANSLATION	protein_coding	-	-	5	544	0	0	3.6	0	0	-4,-7	-	-	0.868	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000124640	ENSMUSP00000122085	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000148636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020289	Nprl3	ENSMUST00000146890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020289	Nprl3	ENSMUST00000129010	ENSMUSP00000123219	TRANSLATION	protein_coding	stop	-	3	182	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000109390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020289	Nprl3	ENSMUST00000129573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020289	Nprl3	ENSMUST00000020530	ENSMUSP00000020530	TRANSLATION	protein_coding	-	CCDS24521.1	1	569	0	0	13	0	0	-4,-7	-	-	4	PRINCIPAL:1
ENSMUSG00000020289	Nprl3	ENSMUST00000132856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020289	Nprl3	ENSMUST00000137950	ENSMUSP00000115594	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000125256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020289	Nprl3	ENSMUST00000136903	ENSMUSP00000114781	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020289	Nprl3	ENSMUST00000149526	ENSMUSP00000122231	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017386	Traf4	ENSMUST00000148218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017386	Traf4	ENSMUST00000149437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017386	Traf4	ENSMUST00000017530	ENSMUSP00000017530	TRANSLATION	protein_coding	-	CCDS25090.1	1	470	20	5.54	14.3	164.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000008855	Hdac5	ENSMUST00000137787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000133651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000125072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008855	Hdac5	ENSMUST00000128686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008855	Hdac5	ENSMUST00000145540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000124077	ENSMUSP00000116672	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008855	Hdac5	ENSMUST00000156337	ENSMUSP00000116646	TRANSLATION	protein_coding	stop	-	5	175	0	1.2	0	114.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008855	Hdac5	ENSMUST00000140962	ENSMUSP00000115435	TRANSLATION	protein_coding	start/stop	-	5	142	0	1.88	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008855	Hdac5	ENSMUST00000008999	ENSMUSP00000008999	TRANSLATION	protein_coding	-	CCDS70320.1	1	1121	12	12.19	0.5	380.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000008855	Hdac5	ENSMUST00000131254	ENSMUSP00000118108	TRANSLATION	protein_coding	stop	-	3	158	0	1.2	0	114.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008855	Hdac5	ENSMUST00000149087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000126453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000136304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000107151	ENSMUSP00000102769	TRANSLATION	protein_coding	-	-	5	1030	9	10.19	0	355.7	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000008855	Hdac5	ENSMUST00000155065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000140481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000107150	ENSMUSP00000102768	TRANSLATION	protein_coding	-	CCDS70321.1	1	1102	12	12.19	0.5	380.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000008855	Hdac5	ENSMUST00000107152	ENSMUSP00000102770	TRANSLATION	protein_coding	-	CCDS36341.1	1	1115	12	12.19	3.9	380.7	0	-4,-5	-	-	19	PRINCIPAL:3
ENSMUSG00000008855	Hdac5	ENSMUST00000150965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008855	Hdac5	ENSMUST00000150683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040950	Mgl2	ENSMUST00000041550	ENSMUSP00000048568	TRANSLATION	protein_coding	-	CCDS24935.1	1	332	12	3.69	0.5	191.2	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000040950	Mgl2	ENSMUST00000132645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040950	Mgl2	ENSMUST00000147502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040950	Mgl2	ENSMUST00000165951	ENSMUSP00000131344	TRANSLATION	protein_coding	-	-	1	381	12	3.69	0.5	181.7	1	-4,-6	-	-	17.43	MINOR
ENSMUSG00000040950	Mgl2	ENSMUST00000108584	ENSMUSP00000104225	TRANSLATION	protein_coding	start	-	1	374	12	3.69	0	181.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000000782	Tcf7	ENSMUST00000109071	ENSMUSP00000104699	TRANSLATION	protein_coding	-	-	1	419	0	2.84	2.2	269.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000782	Tcf7	ENSMUST00000238914	ENSMUSP00000158937	TRANSLATION	protein_coding	stop	-	-	192	0	2.2	0	79.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000782	Tcf7	ENSMUST00000086844	ENSMUSP00000084055	TRANSLATION	protein_coding	-	CCDS24670.1	1	303	0	2.2	0.5	153	0	-4,-5	-	-	4.65	MINOR
ENSMUSG00000018593	Sparc	ENSMUST00000141530	ENSMUSP00000119475	TRANSLATION	protein_coding	stop	-	5	172	0	2.95	0	93.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018593	Sparc	ENSMUST00000125787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018593	Sparc	ENSMUST00000216313	ENSMUSP00000149918	TRANSLATION	protein_coding	-	-	5	332	10	6.03	0	228.5	0	1,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000018593	Sparc	ENSMUST00000214685	ENSMUSP00000151000	TRANSLATION	protein_coding	-	CCDS24712.1	5	302	10	6.03	3.7	228.5	0	4,-1	-	-	19	PRINCIPAL:3
ENSMUSG00000018593	Sparc	ENSMUST00000108858	ENSMUSP00000104486	TRANSLATION	protein_coding	-	CCDS70189.1	1	301	10	6.03	2.8	228.5	0	4,-1	-	-	18.667	ALTERNATIVE:2
ENSMUSG00000018593	Sparc	ENSMUST00000123775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018593	Sparc	ENSMUST00000213866	ENSMUSP00000149604	TRANSLATION	protein_coding	-	-	5	332	10	6.03	0	228.5	0	1,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000018593	Sparc	ENSMUST00000130642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018593	Sparc	ENSMUST00000018737	ENSMUSP00000018737	TRANSLATION	protein_coding	-	CCDS24712.1	1	302	10	6.03	3.7	228.5	0	4,-1	-	-	19	PRINCIPAL:3
ENSMUSG00000044328	Trp53i13	ENSMUST00000136101	ENSMUSP00000122898	TRANSLATION	protein_coding	start/stop	-	5	198	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044328	Trp53i13	ENSMUST00000139195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044328	Trp53i13	ENSMUST00000060417	ENSMUSP00000057592	TRANSLATION	protein_coding	-	CCDS25081.1	1	385	0	0	0.5	0	0	3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000044328	Trp53i13	ENSMUST00000124690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044328	Trp53i13	ENSMUST00000126857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079010	Gm11032	ENSMUST00000109941	ENSMUSP00000105567	TRANSLATION	protein_coding	start/stop	-	5	34	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000037593	Rskr	ENSMUST00000130947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037593	Rskr	ENSMUST00000147549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037593	Rskr	ENSMUST00000124730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037593	Rskr	ENSMUST00000136011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037593	Rskr	ENSMUST00000238934	ENSMUSP00000158919	TRANSLATION	protein_coding	-	-	-	406	4	6.03	1.5	195.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000037593	Rskr	ENSMUST00000046361	ENSMUSP00000038139	TRANSLATION	protein_coding	-	-	5	278	4	4.41	0	131.6	0	-4,-2	-	-	8.938	MINOR
ENSMUSG00000037593	Rskr	ENSMUST00000122937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034175	Rhbdd3	ENSMUST00000146879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034175	Rhbdd3	ENSMUST00000148761	ENSMUSP00000120264	TRANSLATION	protein_coding	stop	-	5	192	0	0	0	27.4	7	-1,-4	-	-	-1	MINOR
ENSMUSG00000034175	Rhbdd3	ENSMUST00000129016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034175	Rhbdd3	ENSMUST00000134267	ENSMUSP00000118085	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000034175	Rhbdd3	ENSMUST00000137370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034175	Rhbdd3	ENSMUST00000109878	ENSMUSP00000105504	TRANSLATION	protein_coding	-	CCDS24397.1	1	385	0	0	6.3	52.3	7	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000034175	Rhbdd3	ENSMUST00000139742	ENSMUSP00000116703	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034175	Rhbdd3	ENSMUST00000150632	ENSMUSP00000119972	TRANSLATION	protein_coding	stop	-	3	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034175	Rhbdd3	ENSMUST00000036320	ENSMUSP00000044703	TRANSLATION	protein_coding	-	CCDS70133.1	1	375	0	0	0.5	48.6	5	-1,-4	-	-	5.574	MINOR
ENSMUSG00000034175	Rhbdd3	ENSMUST00000101610	ENSMUSP00000099131	TRANSLATION	protein_coding	-	CCDS24397.1	1	385	0	0	6.3	52.3	7	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000093839	Olfr462	ENSMUST00000049743	ENSMUSP00000055334	TRANSLATION	protein_coding	-	CCDS25221.1	-	311	0	0.36	8.8	138.1	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093839	Olfr462	ENSMUST00000213672	ENSMUSP00000149954	TRANSLATION	protein_coding	-	CCDS25221.1	5	311	0	0.36	8.8	138.1	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093839	Olfr462	ENSMUST00000213928	ENSMUSP00000150179	TRANSLATION	protein_coding	-	CCDS25221.1	5	311	0	0.36	8.8	138.1	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000070375	Olfr406	ENSMUST00000217016	ENSMUSP00000148929	TRANSLATION	protein_coding	-	CCDS36222.1	5	323	0	0.36	1.5	189.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070375	Olfr406	ENSMUST00000214303	ENSMUSP00000150802	TRANSLATION	protein_coding	-	CCDS36222.1	5	323	0	0.36	1.5	189.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070375	Olfr406	ENSMUST00000133561	ENSMUSP00000125963	TRANSLATION	protein_coding	-	CCDS36222.1	-	323	0	0.36	1.5	189.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025161	Slc16a3	ENSMUST00000129473	ENSMUSP00000117275	TRANSLATION	protein_coding	stop	-	3	291	0	0	0	88.8	9	-4,-7	-	-	-1	MINOR
ENSMUSG00000025161	Slc16a3	ENSMUST00000070653	ENSMUSP00000068854	TRANSLATION	protein_coding	-	CCDS25761.1	1	470	0	0	1.5	105.4	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025161	Slc16a3	ENSMUST00000100130	ENSMUSP00000097706	TRANSLATION	protein_coding	-	CCDS25761.1	1	470	0	0	1.5	105.4	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025161	Slc16a3	ENSMUST00000154187	ENSMUSP00000122784	TRANSLATION	protein_coding	stop	-	2	253	0	0	0	79.4	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000025161	Slc16a3	ENSMUST00000140467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025161	Slc16a3	ENSMUST00000134540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025161	Slc16a3	ENSMUST00000133029	ENSMUSP00000115047	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025161	Slc16a3	ENSMUST00000168579	ENSMUSP00000125846	TRANSLATION	protein_coding	-	CCDS25761.1	1	470	0	0	1.5	105.4	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039691	Tspan10	ENSMUST00000044105	ENSMUSP00000041883	TRANSLATION	protein_coding	-	CCDS25733.2	1	332	0	0	0.5	131.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039691	Tspan10	ENSMUST00000143192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018916	Csf2	ENSMUST00000019060	ENSMUSP00000019060	TRANSLATION	protein_coding	-	CCDS24692.1	1	141	0	3.3	0.5	207.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000018846	Pank3	ENSMUST00000018990	ENSMUSP00000018990	TRANSLATION	protein_coding	-	CCDS24543.1	1	370	17	5.698	15	388.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000060923	Acyp2	ENSMUST00000074613	ENSMUSP00000074195	TRANSLATION	protein_coding	-	CCDS24507.1	1	106	8	2.75	0.5	84	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020328	Nudcd2	ENSMUST00000020578	ENSMUSP00000020578	TRANSLATION	protein_coding	-	CCDS24549.1	1	157	0	3.75	19	57	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020328	Nudcd2	ENSMUST00000144601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020328	Nudcd2	ENSMUST00000127382	ENSMUSP00000123991	TRANSLATION	protein_coding	-	CCDS70162.1	2	132	0	3	2.5	46.9	0	-4,-5	-	-	9.77	MINOR
ENSMUSG00000020328	Nudcd2	ENSMUST00000127057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020328	Nudcd2	ENSMUST00000141839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078269	Gm14180	ENSMUST00000105066	ENSMUSP00000100687	TRANSLATION	protein_coding	-	-	-	25	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020700	Map3k3	ENSMUST00000124449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020700	Map3k3	ENSMUST00000002044	ENSMUSP00000002044	TRANSLATION	protein_coding	-	CCDS25548.1	1	626	19	7.84	7.5	272.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020700	Map3k3	ENSMUST00000129793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020422	Tns3	ENSMUST00000131941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020422	Tns3	ENSMUST00000239091	ENSMUSP00000158873	TRANSLATION	protein_coding	-	-	-	1553	7	14.041	0.5	313.1	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000020422	Tns3	ENSMUST00000239111	ENSMUSP00000158940	TRANSLATION	protein_coding	-	-	-	1589	7	13.681	0.5	313.1	0	-4,-2	-	-	17.28	PRINCIPAL:5
ENSMUSG00000020422	Tns3	ENSMUST00000134823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020422	Tns3	ENSMUST00000020695	ENSMUSP00000020695	TRANSLATION	protein_coding	-	CCDS36109.1	5	1440	7	12.281	0.5	275.7	0	-4,-5	-	-	12.234	MINOR
ENSMUSG00000020422	Tns3	ENSMUST00000129074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006777	Krt23	ENSMUST00000006969	ENSMUSP00000006969	TRANSLATION	protein_coding	-	CCDS25382.1	1	422	0	2	3.9	280.5	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000020805	Slc13a5	ENSMUST00000207990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020805	Slc13a5	ENSMUST00000137701	ENSMUSP00000119417	TRANSLATION	protein_coding	-	-	5	526	0	3.345	1.2	331.7	17	-1,-4	-	-	6.081	MINOR
ENSMUSG00000020805	Slc13a5	ENSMUST00000208912	ENSMUSP00000146762	TRANSLATION	protein_coding	-	-	5	529	0	3.745	1.2	353.6	15	-1,-4	-	-	8.193	MINOR
ENSMUSG00000020805	Slc13a5	ENSMUST00000208056	ENSMUSP00000146922	TRANSLATION	protein_coding	-	-	5	555	0	3.845	1.2	361.7	17	-1,-4	-	-	8.877	MINOR
ENSMUSG00000020805	Slc13a5	ENSMUST00000021161	ENSMUSP00000021161	TRANSLATION	protein_coding	-	CCDS24983.1	1	572	0	4.345	3.9	398.2	17	-1,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000020805	Slc13a5	ENSMUST00000140167	ENSMUSP00000119822	TRANSLATION	protein_coding	stop	-	5	168	0	1.5	0	88.3	5	-1,-4	-	-	-1	MINOR
ENSMUSG00000107711	Olfr320	ENSMUST00000204718	ENSMUSP00000145531	TRANSLATION	protein_coding	-	CCDS24739.1	-	306	0	0.42	1.5	151.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000107711	Olfr320	ENSMUST00000214662	ENSMUSP00000150051	TRANSLATION	protein_coding	-	CCDS24739.1	5	306	0	0.42	1.5	151.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038366	Lasp1	ENSMUST00000127575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038366	Lasp1	ENSMUST00000107569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038366	Lasp1	ENSMUST00000148280	ENSMUSP00000123050	TRANSLATION	protein_coding	stop	-	3	186	2	2.028	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000138919	ENSMUSP00000114407	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000146572	ENSMUSP00000121907	TRANSLATION	protein_coding	stop	-	5	89	2	0.928	0	75	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000155762	ENSMUSP00000119538	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000134428	ENSMUSP00000119797	TRANSLATION	protein_coding	stop	-	3	18	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000136723	ENSMUSP00000114306	TRANSLATION	protein_coding	stop	-	5	69	2	0.928	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000043843	ENSMUSP00000042123	TRANSLATION	protein_coding	-	CCDS25332.1	1	263	8	4.108	7.5	186.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000038366	Lasp1	ENSMUST00000143571	ENSMUSP00000116102	TRANSLATION	protein_coding	stop	-	5	28	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000127033	ENSMUSP00000127792	TRANSLATION	protein_coding	stop	-	3	70	2	0.928	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000152962	ENSMUSP00000120645	TRANSLATION	protein_coding	stop	-	3	99	2	0.928	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000129558	ENSMUSP00000123165	TRANSLATION	protein_coding	stop	-	2	103	2	0.928	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000129828	ENSMUSP00000115308	TRANSLATION	protein_coding	stop	-	3	129	2	0.928	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000153520	ENSMUSP00000120458	TRANSLATION	protein_coding	stop	-	1	47	2	0.928	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038366	Lasp1	ENSMUST00000107568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044056	Efcab9	ENSMUST00000109377	ENSMUSP00000105002	TRANSLATION	protein_coding	-	-	3	112	4	0	0	0	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000044056	Efcab9	ENSMUST00000054327	ENSMUSP00000060205	TRANSLATION	protein_coding	-	CCDS24528.1	1	216	6	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000106287	ENSMUSP00000101894	TRANSLATION	protein_coding	-	CCDS25702.1	1	403	6	3	1.5	439.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000017620	ENSMUSP00000017620	TRANSLATION	protein_coding	-	CCDS25702.1	1	403	6	3	1.5	439.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000164927	ENSMUSP00000126919	TRANSLATION	protein_coding	-	CCDS25702.1	1	403	6	3	1.5	439.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000106288	ENSMUSP00000101895	TRANSLATION	protein_coding	-	CCDS25702.1	5	403	6	3	1.5	439.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000092378	ENSMUSP00000090032	TRANSLATION	protein_coding	-	CCDS25702.1	1	403	6	3	1.5	439.8	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025575	Cant1	ENSMUST00000106289	ENSMUSP00000101896	TRANSLATION	protein_coding	-	CCDS59572.1	1	440	6	2.5	0.5	420.2	1	-4,-7	-	-	15.822	MINOR
ENSMUSG00000040699	Limd2	ENSMUST00000064545	ENSMUSP00000067070	TRANSLATION	protein_coding	-	CCDS25549.1	2	128	8	2	14.8	42.9	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040699	Limd2	ENSMUST00000045923	ENSMUSP00000045357	TRANSLATION	protein_coding	-	CCDS25549.1	1	128	8	2	14.8	42.9	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040699	Limd2	ENSMUST00000138094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040699	Limd2	ENSMUST00000106875	ENSMUSP00000102488	TRANSLATION	protein_coding	-	CCDS25549.1	3	128	8	2	14.8	42.9	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000009075	Cabp7	ENSMUST00000009219	ENSMUSP00000009219	TRANSLATION	protein_coding	-	CCDS24390.1	1	215	12	3.32	14.2	50.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000050965	Prkca	ENSMUST00000134910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050965	Prkca	ENSMUST00000100302	ENSMUSP00000097875	TRANSLATION	protein_coding	-	-	1	248	7	5.7	0	169.6	0	-4,-2	-	-	0	MINOR
ENSMUSG00000050965	Prkca	ENSMUST00000059595	ENSMUSP00000062392	TRANSLATION	protein_coding	-	CCDS25573.1	1	672	34	15.58	7.6	460.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000050965	Prkca	ENSMUST00000134725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047181	Samd14	ENSMUST00000124735	ENSMUSP00000123361	TRANSLATION	protein_coding	stop	-	3	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047181	Samd14	ENSMUST00000055947	ENSMUSP00000062231	TRANSLATION	protein_coding	-	CCDS25269.1	1	417	0	1.6	7.5	44.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047181	Samd14	ENSMUST00000128512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020928	Higd1b	ENSMUST00000021302	ENSMUSP00000021302	TRANSLATION	protein_coding	-	CCDS36345.1	1	98	0	2.5	7.5	57.1	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020928	Higd1b	ENSMUST00000107072	ENSMUSP00000102687	TRANSLATION	protein_coding	-	CCDS36345.1	5	98	0	2.5	7.5	57.1	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020928	Higd1b	ENSMUST00000107073	ENSMUSP00000102688	TRANSLATION	protein_coding	-	CCDS36345.1	2	98	0	2.5	7.5	57.1	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018740	Slc25a35	ENSMUST00000136520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018740	Slc25a35	ENSMUST00000018884	ENSMUSP00000018884	TRANSLATION	protein_coding	-	-	1	296	8	2.88	7.5	162.4	0	-3,-6	-	-	20.742	ALTERNATIVE:1
ENSMUSG00000018740	Slc25a35	ENSMUST00000102606	ENSMUSP00000099666	TRANSLATION	protein_coding	-	CCDS24874.1	1	300	8	2.88	7.5	166.7	0	-3,-6	-	-	21	PRINCIPAL:2
ENSMUSG00000070382	Olfr391	ENSMUST00000214485	ENSMUSP00000151029	TRANSLATION	protein_coding	-	CCDS83838.1	2	312	0	0.36	3.9	183.3	0	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000057967	Fgf18	ENSMUST00000109363	ENSMUSP00000104987	TRANSLATION	protein_coding	-	-	3	98	0	1.33	0	79.6	0	-4,-5	-	-	4.644	MINOR
ENSMUSG00000057967	Fgf18	ENSMUST00000020507	ENSMUSP00000020507	TRANSLATION	protein_coding	-	CCDS24531.1	1	207	0	3.08	10.8	143.9	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000020713	Gh	ENSMUST00000103071	ENSMUSP00000099360	TRANSLATION	protein_coding	-	CCDS25554.1	1	216	0	4	7.5	154.5	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000018752	Tnfsfm13	ENSMUST00000108649	ENSMUSP00000104289	TRANSLATION	protein_coding,RT	-	-	5	329	0	5.8	1.2	63.5	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000018752	Tnfsfm13	ENSMUST00000180587	ENSMUSP00000137973	TRANSLATION	protein_coding,RT	-	CCDS24906.1	2	410	2	6.8	0.5	73.2	0	-4,-6	-	-	-1	PRINCIPAL:3
ENSMUSG00000018752	Tnfsfm13	ENSMUST00000174159	ENSMUSP00000133951	TRANSLATION	protein_coding,RT	-	CCDS48828.1	2	408	2	6.8	0.5	73.2	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000017837	Nkiras2	ENSMUST00000155840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017837	Nkiras2	ENSMUST00000017981	ENSMUSP00000017981	TRANSLATION	protein_coding	-	CCDS25429.1	1	191	18	3	19.5	91	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017837	Nkiras2	ENSMUST00000142993	ENSMUSP00000114456	TRANSLATION	protein_coding	stop	-	1	153	18	2.6	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017837	Nkiras2	ENSMUST00000107376	ENSMUSP00000102999	TRANSLATION	protein_coding	-	CCDS25429.1	5	191	18	3	19.5	91	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017837	Nkiras2	ENSMUST00000127547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017837	Nkiras2	ENSMUST00000051947	ENSMUSP00000059559	TRANSLATION	protein_coding	-	CCDS25429.1	1	191	18	3	19.5	91	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000078157	Fem1al	ENSMUST00000104962	ENSMUSP00000100568	TRANSLATION	protein_coding	-	CCDS78924.1	-	654	0	0.2	1.5	173.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020268	Lyrm7	ENSMUST00000141703	ENSMUSP00000121259	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	35.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020268	Lyrm7	ENSMUST00000144164	ENSMUSP00000120778	TRANSLATION	protein_coding	-	CCDS36154.2	2	104	0	0	13	38.7	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000020268	Lyrm7	ENSMUST00000124351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020268	Lyrm7	ENSMUST00000148070	ENSMUSP00000118373	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	0	13	38.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020268	Lyrm7	ENSMUST00000135853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020268	Lyrm7	ENSMUST00000127887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034757	Tmub2	ENSMUST00000156077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034757	Tmub2	ENSMUST00000100387	ENSMUSP00000097956	TRANSLATION	protein_coding	start	-	1	358	0	1.2	1	36.8	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000034757	Tmub2	ENSMUST00000156326	ENSMUSP00000116327	TRANSLATION	protein_coding	-	CCDS25494.1	1	319	0	1.2	3.9	36.8	3	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000034757	Tmub2	ENSMUST00000135551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034757	Tmub2	ENSMUST00000036376	ENSMUSP00000047600	TRANSLATION	protein_coding	-	CCDS25494.1	1	319	0	1.2	3.9	36.8	3	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000069917	Hba-a2	ENSMUST00000147010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069917	Hba-a2	ENSMUST00000093207	ENSMUSP00000090895	TRANSLATION	protein_coding	-	CCDS48766.1	1	142	32	3	11.6	99.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025175	Fn3k	ENSMUST00000026175	ENSMUSP00000026175	TRANSLATION	protein_coding	-	CCDS25776.1	1	309	2	2.08	9.1	249	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000025175	Fn3k	ENSMUST00000092302	ENSMUSP00000089955	TRANSLATION	protein_coding	-	-	1	176	1	1.18	0	63.5	0	-4,-7	-	-	4.402	MINOR
ENSMUSG00000025175	Fn3k	ENSMUST00000103014	ENSMUSP00000099303	TRANSLATION	protein_coding	-	CCDS25777.1	1	208	1	1.18	0.5	62.9	0	-4,-7	-	-	4.402	MINOR
ENSMUSG00000049321	Zfp2	ENSMUST00000124748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049321	Zfp2	ENSMUST00000109129	ENSMUSP00000104757	TRANSLATION	protein_coding	-	CCDS36148.1	1	459	52	0.6	3.9	340.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000049321	Zfp2	ENSMUST00000116378	ENSMUSP00000112079	TRANSLATION	protein_coding	-	CCDS36148.1	1	459	52	0.6	3.9	340.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000049321	Zfp2	ENSMUST00000109128	ENSMUSP00000104756	TRANSLATION	protein_coding	-	CCDS36148.1	1	459	52	0.6	3.9	340.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000049321	Zfp2	ENSMUST00000150903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049321	Zfp2	ENSMUST00000151027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020716	Nf1	ENSMUST00000071325	ENSMUSP00000071289	TRANSLATION	protein_coding	-	CCDS25119.1	2	2841	0	11.045	0.5	142.6	0	-4,-6	-	-	11.472	PRINCIPAL:2
ENSMUSG00000020716	Nf1	ENSMUST00000146699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020716	Nf1	ENSMUST00000122917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020716	Nf1	ENSMUST00000130979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020716	Nf1	ENSMUST00000131800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020716	Nf1	ENSMUST00000137997	ENSMUSP00000120982	TRANSLATION	protein_coding	start	-	1	826	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020716	Nf1	ENSMUST00000145839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020716	Nf1	ENSMUST00000108251	ENSMUSP00000103886	TRANSLATION	protein_coding	-	-	5	2820	0	11	1.5	151.4	0	-4,-6	-	-	11.91	ALTERNATIVE:2
ENSMUSG00000020716	Nf1	ENSMUST00000219057	ENSMUSP00000151975	TRANSLATION	protein_coding	stop	-	5	1382	0	4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089876	Tmem102	ENSMUST00000051025	ENSMUSP00000132164	TRANSLATION	protein_coding	-	CCDS36198.1	1	509	0	0	1.5	41.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038150	Ormdl3	ENSMUST00000052919	ENSMUSP00000053056	TRANSLATION	protein_coding	-	CCDS25355.1	1	153	0	0	19.5	181.5	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000020530	Ggnbp2	ENSMUST00000167429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020530	Ggnbp2	ENSMUST00000100686	ENSMUSP00000098252	TRANSLATION	protein_coding	-	-	5	676	0	0	2.4	0	0	-4,-5	-	-	0.528	MINOR
ENSMUSG00000020530	Ggnbp2	ENSMUST00000168434	ENSMUSP00000130013	TRANSLATION	protein_coding	-	-	5	696	0	0	6.3	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000020530	Ggnbp2	ENSMUST00000108081	ENSMUSP00000103716	TRANSLATION	protein_coding	-	CCDS36262.1	5	698	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:2
ENSMUSG00000020530	Ggnbp2	ENSMUST00000166425	ENSMUSP00000129794	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020530	Ggnbp2	ENSMUST00000172405	ENSMUSP00000127584	TRANSLATION	protein_coding	-	CCDS36262.1	1	698	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:2
ENSMUSG00000020530	Ggnbp2	ENSMUST00000132098	ENSMUSP00000129898	TRANSLATION	protein_coding	start	-	3	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020530	Ggnbp2	ENSMUST00000154915	ENSMUSP00000117482	TRANSLATION	protein_coding	-	-	1	696	0	0	6.3	0	0	-4,-5	-	-	2	ALTERNATIVE:1
ENSMUSG00000020530	Ggnbp2	ENSMUST00000018547	ENSMUSP00000018547	TRANSLATION	protein_coding	-	-	5	738	0	0	2.4	0	0	-4,-5	-	-	0.528	MINOR
ENSMUSG00000020530	Ggnbp2	ENSMUST00000170741	ENSMUSP00000128109	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020530	Ggnbp2	ENSMUST00000165459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020530	Ggnbp2	ENSMUST00000168267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020530	Ggnbp2	ENSMUST00000134043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050818	Olfr330	ENSMUST00000213188	ENSMUSP00000149073	TRANSLATION	protein_coding	-	CCDS24733.1	2	315	0	0.42	1.7	157.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050818	Olfr330	ENSMUST00000134055	ENSMUSP00000145126	TRANSLATION	protein_coding	-	CCDS24733.1	-	315	0	0.42	1.7	157.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032691	Nlrp3	ENSMUST00000101148	ENSMUSP00000098707	TRANSLATION	protein_coding	-	CCDS24771.1	1	1033	10	7.38	1.5	379.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032691	Nlrp3	ENSMUST00000149126	ENSMUSP00000114231	TRANSLATION	protein_coding	stop	-	2	173	2	1.4	0	111.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032691	Nlrp3	ENSMUST00000079476	ENSMUSP00000078440	TRANSLATION	protein_coding	-	CCDS24771.1	1	1033	10	7.38	1.5	379.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041828	Abca8a	ENSMUST00000141279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041828	Abca8a	ENSMUST00000106662	ENSMUSP00000102273	TRANSLATION	protein_coding	stop	-	5	134	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041828	Abca8a	ENSMUST00000106664	ENSMUSP00000102275	TRANSLATION	protein_coding	-	-	5	1620	18	11.21	0	334.1	12	-4,-7	-	-	17.28	ALTERNATIVE:2
ENSMUSG00000041828	Abca8a	ENSMUST00000129810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041828	Abca8a	ENSMUST00000154849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041828	Abca8a	ENSMUST00000146635	ENSMUSP00000114393	TRANSLATION	protein_coding	start/stop	-	5	211	9	3.26	0	66.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000041828	Abca8a	ENSMUST00000046223	ENSMUSP00000045808	TRANSLATION	protein_coding	-	CCDS48974.1	5	1619	18	11.57	0.5	334.1	12	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000041828	Abca8a	ENSMUST00000100287	ENSMUSP00000097860	TRANSLATION	protein_coding	-	-	5	1620	18	11.21	0	334.1	12	-4,-7	-	-	17.28	ALTERNATIVE:2
ENSMUSG00000041629	Fam104a	ENSMUST00000120194	ENSMUSP00000113652	TRANSLATION	protein_coding	-	CCDS25600.2	1	185	0	0	2.7	182.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043314	Olfr30	ENSMUST00000055204	ENSMUSP00000055961	TRANSLATION	protein_coding	-	CCDS24732.1	-	315	0	0.42	1.5	180.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043314	Olfr30	ENSMUST00000215691	ENSMUSP00000148907	TRANSLATION	protein_coding	-	CCDS24732.1	5	315	0	0.42	1.5	180.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095095	Olfr385	ENSMUST00000215689	ENSMUSP00000149293	TRANSLATION	protein_coding	-	CCDS25013.1	5	312	0	0.36	2.7	185	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095095	Olfr385	ENSMUST00000071553	ENSMUSP00000071484	TRANSLATION	protein_coding	-	CCDS25013.1	-	312	0	0.36	2.7	185	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020271	Fbxw11	ENSMUST00000109366	ENSMUSP00000104991	TRANSLATION	protein_coding	-	CCDS70158.1	1	529	0	9.45	10.8	268.6	0	-4,-5	-	-	15.324	ALTERNATIVE:1
ENSMUSG00000020271	Fbxw11	ENSMUST00000076383	ENSMUSP00000075721	TRANSLATION	protein_coding	-	CCDS36125.1	1	563	0	9.45	12.8	268.6	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000020271	Fbxw11	ENSMUST00000143290	ENSMUSP00000116834	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020271	Fbxw11	ENSMUST00000137898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020271	Fbxw11	ENSMUST00000093205	ENSMUSP00000090893	TRANSLATION	protein_coding	-	CCDS70157.1	1	542	0	9.45	7.5	268.6	0	-4,-5	-	-	14.204	MINOR
ENSMUSG00000045775	Slc16a5	ENSMUST00000106532	ENSMUSP00000102142	TRANSLATION	protein_coding	-	-	1	149	0	0	0	0	2	1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000045775	Slc16a5	ENSMUST00000146500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045775	Slc16a5	ENSMUST00000139318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045775	Slc16a5	ENSMUST00000133636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045775	Slc16a5	ENSMUST00000125251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045775	Slc16a5	ENSMUST00000092445	ENSMUSP00000090102	TRANSLATION	protein_coding	stop	CCDS36373.1	5	468	0	0	1.5	140.6	12	1,-3	-	-	-1	MINOR
ENSMUSG00000045775	Slc16a5	ENSMUST00000153466	ENSMUSP00000117727	TRANSLATION	protein_coding	stop	-	3	137	0	0	0	0	3	1,-3	-	-	-1	MINOR
ENSMUSG00000045775	Slc16a5	ENSMUST00000140739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045775	Slc16a5	ENSMUST00000140567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050628	Ubald2	ENSMUST00000144310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050628	Ubald2	ENSMUST00000057676	ENSMUSP00000058894	TRANSLATION	protein_coding	-	CCDS25666.1	1	164	0	1.75	3.9	34.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000018920	Cxcl16	ENSMUST00000154475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018920	Cxcl16	ENSMUST00000019064	ENSMUSP00000019064	TRANSLATION	protein_coding	-	CCDS24948.1	1	246	0	0	1.5	0	1	1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000018920	Cxcl16	ENSMUST00000126391	ENSMUSP00000133513	TRANSLATION	nonsense_mediated_decay	start	-	1	233	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042436	Mfap4	ENSMUST00000127073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042436	Mfap4	ENSMUST00000040522	ENSMUSP00000038971	TRANSLATION	protein_coding	-	CCDS83820.1	2	281	7	3.83	0.5	220.9	0	4,-1	-	-	17.106	MINOR
ENSMUSG00000042436	Mfap4	ENSMUST00000064783	ENSMUSP00000070848	TRANSLATION	protein_coding	-	CCDS24813.1	1	257	7	3.8	0.5	235.8	0	4,-1	-	-	17.94	PRINCIPAL:1
ENSMUSG00000042436	Mfap4	ENSMUST00000126308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020623	Map2k6	ENSMUST00000133920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020623	Map2k6	ENSMUST00000146084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020623	Map2k6	ENSMUST00000146540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020623	Map2k6	ENSMUST00000100260	ENSMUSP00000097831	TRANSLATION	protein_coding	-	-	1	293	23	7.83	0	160.8	0	-4,-5	-	-	13.776	MINOR
ENSMUSG00000020623	Map2k6	ENSMUST00000020949	ENSMUSP00000020949	TRANSLATION	protein_coding	-	CCDS25592.1	1	334	23	9.08	13.7	189.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000035831	Krt25	ENSMUST00000038004	ENSMUSP00000048439	TRANSLATION	protein_coding	-	CCDS25377.1	1	446	0	3.76	5.1	327.6	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000038967	Pdk2	ENSMUST00000129262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038967	Pdk2	ENSMUST00000126730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038967	Pdk2	ENSMUST00000155857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038967	Pdk2	ENSMUST00000141712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038967	Pdk2	ENSMUST00000038431	ENSMUSP00000041447	TRANSLATION	protein_coding	-	CCDS25270.1	1	407	26	10.25	10.8	230.3	0	-4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000020832	Eral1	ENSMUST00000021183	ENSMUSP00000021183	TRANSLATION	protein_coding	-	CCDS48856.1	1	437	15	5.33	3.9	97.4	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000020832	Eral1	ENSMUST00000139731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020832	Eral1	ENSMUST00000135154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039989	Cbx4	ENSMUST00000026665	ENSMUSP00000026665	TRANSLATION	protein_coding	-	CCDS25710.1	1	551	0	2.45	0.5	104.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039989	Cbx4	ENSMUST00000145058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040978	Gm11992	ENSMUST00000043285	ENSMUSP00000039806	TRANSLATION	protein_coding	-	CCDS24431.1	1	291	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000018661	Cog1	ENSMUST00000063776	ENSMUSP00000068394	TRANSLATION	protein_coding	-	-	1	396	0	0	0	54.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000018661	Cog1	ENSMUST00000123085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018661	Cog1	ENSMUST00000018805	ENSMUSP00000018805	TRANSLATION	protein_coding	-	CCDS25599.1	1	980	0	0	1.5	54.8	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000018661	Cog1	ENSMUST00000134418	ENSMUSP00000123001	TRANSLATION	protein_coding	start	-	5	117	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018661	Cog1	ENSMUST00000148736	ENSMUSP00000115773	TRANSLATION	protein_coding	start	-	5	217	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000018661	Cog1	ENSMUST00000142069	ENSMUSP00000119202	TRANSLATION	protein_coding	start	-	2	204	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018661	Cog1	ENSMUST00000152653	ENSMUSP00000117223	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018661	Cog1	ENSMUST00000137878	ENSMUSP00000119050	TRANSLATION	protein_coding	start	-	2	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069476	Zfp616	ENSMUST00000108463	ENSMUSP00000104103	TRANSLATION	protein_coding	stop	-	5	485	0	1	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069476	Zfp616	ENSMUST00000116546	ENSMUSP00000112245	TRANSLATION	protein_coding	-	-	1	98	0	1	0	87.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000069476	Zfp616	ENSMUST00000074813	ENSMUSP00000074365	TRANSLATION	protein_coding	-	-	1	98	0	1	0	87.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000069476	Zfp616	ENSMUST00000178159	ENSMUSP00000136549	TRANSLATION	protein_coding	-	CCDS56793.1	-	987	75	0.4	0.5	403.6	0	-4,-5	-	-	14.4	PRINCIPAL:1
ENSMUSG00000069476	Zfp616	ENSMUST00000137407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072915	Gm12258	ENSMUST00000143407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072915	Gm12258	ENSMUST00000093768	ENSMUSP00000091282	TRANSLATION	protein_coding	start	-	-	149	20	1	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072915	Gm12258	ENSMUST00000139337	ENSMUSP00000117644	TRANSLATION	protein_coding	-	-	2	627	32	2	0.5	250.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020802	Ube2o	ENSMUST00000147851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020802	Ube2o	ENSMUST00000082152	ENSMUSP00000080791	TRANSLATION	protein_coding	-	CCDS25670.1	1	1288	0	2.4	0.5	83.3	0	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020802	Ube2o	ENSMUST00000134102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096806	Olfr312	ENSMUST00000078217	ENSMUSP00000077344	TRANSLATION	protein_coding	-	CCDS24749.1	-	308	0	0.42	1.5	178.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096806	Olfr312	ENSMUST00000216407	ENSMUSP00000149697	TRANSLATION	protein_coding	-	CCDS24749.1	5	308	0	0.42	1.5	178.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025371	Chmp6	ENSMUST00000026434	ENSMUSP00000026434	TRANSLATION	protein_coding	-	CCDS36385.1	1	200	0	3.548	9.6	137	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000025371	Chmp6	ENSMUST00000132197	ENSMUSP00000114645	TRANSLATION	protein_coding	stop	-	3	78	0	1.048	0	64.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025371	Chmp6	ENSMUST00000148232	ENSMUSP00000117678	TRANSLATION	protein_coding	stop	-	5	37	0	0.648	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025371	Chmp6	ENSMUST00000137055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025371	Chmp6	ENSMUST00000124199	ENSMUSP00000116677	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025371	Chmp6	ENSMUST00000139814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020267	Hint1	ENSMUST00000020504	ENSMUSP00000020504	TRANSLATION	protein_coding	-	CCDS24702.1	1	126	18	3	21.5	107.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020267	Hint1	ENSMUST00000117710	ENSMUSP00000114037	TRANSLATION	protein_coding	-	-	2	119	15	2	0	54.5	0	-4,-5	-	-	10.842	MINOR
ENSMUSG00000018907	Alox12e	ENSMUST00000019051	ENSMUSP00000019051	TRANSLATION	protein_coding	-	CCDS24943.1	1	662	4	13.3	3.9	68.5	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000018907	Alox12e	ENSMUST00000123752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018907	Alox12e	ENSMUST00000139899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018907	Alox12e	ENSMUST00000149060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017548	Suz12	ENSMUST00000144188	ENSMUSP00000128945	TRANSLATION	nonsense_mediated_decay	start	-	3	51	5	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017548	Suz12	ENSMUST00000126091	ENSMUSP00000129070	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017548	Suz12	ENSMUST00000148140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017548	Suz12	ENSMUST00000132312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017548	Suz12	ENSMUST00000017692	ENSMUSP00000017692	TRANSLATION	protein_coding	-	CCDS25125.1	1	741	5	2.75	0.5	181.3	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000017548	Suz12	ENSMUST00000163272	ENSMUSP00000126932	TRANSLATION	protein_coding	-	CCDS48860.1	5	718	5	2.75	0.5	181.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000038560	Sp6	ENSMUST00000047997	ENSMUSP00000039307	TRANSLATION	protein_coding	-	CCDS25309.1	1	376	12	0.2	5.1	68.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000038560	Sp6	ENSMUST00000107622	ENSMUSP00000103248	TRANSLATION	protein_coding	-	CCDS25309.1	1	376	12	0.2	5.1	68.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000004837	Grap	ENSMUST00000004959	ENSMUSP00000004959	TRANSLATION	protein_coding	-	CCDS24817.1	1	217	0	4.75	8.8	195.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000004837	Grap	ENSMUST00000155380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059845	Gm11567	ENSMUST00000078442	ENSMUSP00000098043	TRANSLATION	protein_coding	-	CCDS48924.1	-	195	0	0	0.5	45.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000047798	Cd300lf	ENSMUST00000106562	ENSMUSP00000102172	TRANSLATION	protein_coding	-	CCDS83925.1	1	296	0	1	0.5	177.2	2	3,-2	-	-	9.468	MINOR
ENSMUSG00000047798	Cd300lf	ENSMUST00000106561	ENSMUSP00000102171	TRANSLATION	protein_coding	-	CCDS48980.1	1	337	0	1.73	0.5	177.2	2	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047798	Cd300lf	ENSMUST00000127927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047798	Cd300lf	ENSMUST00000124083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047798	Cd300lf	ENSMUST00000149335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047798	Cd300lf	ENSMUST00000051264	ENSMUSP00000053983	TRANSLATION	protein_coding	-	CCDS25619.1	1	330	0	1.4	0.5	177.2	2	3,-2	-	-	10.854	MINOR
ENSMUSG00000047798	Cd300lf	ENSMUST00000146254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000378	Ccm2	ENSMUST00000144293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000378	Ccm2	ENSMUST00000160633	ENSMUSP00000125072	TRANSLATION	protein_coding	stop	-	5	243	0	5.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000378	Ccm2	ENSMUST00000161667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000378	Ccm2	ENSMUST00000109722	ENSMUSP00000105344	TRANSLATION	protein_coding	-	CCDS48751.1	1	389	0	7.25	0.5	157	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000000378	Ccm2	ENSMUST00000159007	ENSMUSP00000125608	TRANSLATION	protein_coding	stop	-	3	113	0	2.448	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000378	Ccm2	ENSMUST00000000388	ENSMUSP00000000388	TRANSLATION	protein_coding	-	CCDS24422.1	1	453	0	8.248	3.5	157	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000000378	Ccm2	ENSMUST00000109721	ENSMUSP00000105343	TRANSLATION	protein_coding	-	CCDS48751.1	5	389	0	7.25	0.5	157	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000000378	Ccm2	ENSMUST00000161501	ENSMUSP00000123790	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078632	Lrrc37a	ENSMUST00000153273	ENSMUSP00000121903	TRANSLATION	protein_coding	-	-	5	3298	0	3.84	0	1065.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017747	Ghdc	ENSMUST00000017891	ENSMUSP00000017891	TRANSLATION	protein_coding	-	CCDS25437.1	1	532	8	2.93	0.5	203.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000017747	Ghdc	ENSMUST00000139341	ENSMUSP00000114260	TRANSLATION	protein_coding	stop	-	2	118	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000017747	Ghdc	ENSMUST00000147682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018451	6330403K07Rik	ENSMUST00000238695	ENSMUSP00000158674	TRANSLATION	protein_coding	-	-	-	121	0	0	2.7	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000018451	6330403K07Rik	ENSMUST00000156068	ENSMUSP00000158145	TRANSLATION	nonsense_mediated_decay	-	-	1	121	0	0	2.7	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020399	Havcr2	ENSMUST00000020668	ENSMUSP00000020668	TRANSLATION	protein_coding	-	CCDS36135.1	1	281	4	3.255	1.5	50.6	1	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000020399	Havcr2	ENSMUST00000109229	ENSMUSP00000104852	TRANSLATION	protein_coding	-	-	1	232	4	2.255	0	34.5	1	3,-2	-	-	12.094	MINOR
ENSMUSG00000089724	Krtap4-8	ENSMUST00000107439	ENSMUSP00000103063	TRANSLATION	protein_coding	-	CCDS48916.1	-	209	0	0	0.5	84.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017417	Plxdc1	ENSMUST00000107564	ENSMUSP00000103190	TRANSLATION	protein_coding	-	-	2	111	0	0	0	0	0	3,-3	-	-	0	MINOR
ENSMUSG00000017417	Plxdc1	ENSMUST00000017561	ENSMUSP00000017561	TRANSLATION	protein_coding	-	CCDS25333.1	1	500	0	0	5.1	23.1	1	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000017417	Plxdc1	ENSMUST00000107565	ENSMUSP00000103191	TRANSLATION	protein_coding	-	CCDS48897.1	1	507	0	0	0.5	23.1	1	3,-3	-	-	6	MINOR
ENSMUSG00000017417	Plxdc1	ENSMUST00000141708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064010	Dppa1	ENSMUST00000077173	ENSMUSP00000076416	TRANSLATION	protein_coding	-	CCDS24581.1	1	116	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000064010	Dppa1	ENSMUST00000109227	ENSMUSP00000104850	TRANSLATION	protein_coding	-	CCDS24581.1	2	116	0	0	0.5	0	1	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000044787	Spata32	ENSMUST00000103076	ENSMUSP00000099365	TRANSLATION	protein_coding	-	CCDS25515.1	1	334	0	0	0.5	280.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025129	Ppp1r27	ENSMUST00000026121	ENSMUSP00000026121	TRANSLATION	protein_coding	-	CCDS36392.1	1	154	0	2.2	7.5	55.9	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000054404	Slfn5	ENSMUST00000108158	ENSMUSP00000103793	TRANSLATION	protein_coding	stop	-	5	378	0	0	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054404	Slfn5	ENSMUST00000150687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054404	Slfn5	ENSMUST00000108157	ENSMUSP00000103792	TRANSLATION	protein_coding	-	CCDS25153.1	1	884	10	0	0.5	39.8	0	-4,-5	-	-	11.7	PRINCIPAL:1
ENSMUSG00000054404	Slfn5	ENSMUST00000067443	ENSMUSP00000064819	TRANSLATION	protein_coding	-	CCDS25153.1	1	884	10	0	0.5	39.8	0	-4,-5	-	-	11.7	PRINCIPAL:1
ENSMUSG00000064165	Krt39	ENSMUST00000076948	ENSMUSP00000076216	TRANSLATION	protein_coding	-	CCDS25383.1	1	482	0	3.47	1.5	316.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064165	Krt39	ENSMUST00000107445	ENSMUSP00000103069	TRANSLATION	protein_coding	-	CCDS25383.1	5	482	0	3.47	1.5	316.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044084	Spem2	ENSMUST00000056941	ENSMUSP00000051204	TRANSLATION	protein_coding	-	CCDS24912.1	1	503	0	0	0.5	391.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000130767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000153305	ENSMUSP00000116405	TRANSLATION	nonsense_mediated_decay	-	-	3	142	0	0	0	191.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000127048	ENSMUSP00000114849	TRANSLATION	protein_coding	stop	-	2	145	0	0	0	233.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000144731	ENSMUSP00000114724	TRANSLATION	protein_coding	stop	-	5	124	0	0	0	200.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000156315	ENSMUSP00000123113	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	230.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000147573	ENSMUSP00000118320	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000134732	ENSMUSP00000120258	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	156.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000103152	ENSMUSP00000099441	TRANSLATION	protein_coding	-	CCDS25306.1	1	503	0	0	3.9	636.1	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000149033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000154289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018669	Cdk5rap3	ENSMUST00000130774	ENSMUSP00000114661	TRANSLATION	protein_coding	stop	-	5	80	0	0	0	137.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018548	Trim37	ENSMUST00000041282	ENSMUSP00000049057	TRANSLATION	protein_coding	-	CCDS25210.1	1	961	12	4.868	4.1	70.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000018548	Trim37	ENSMUST00000154138	ENSMUSP00000118260	TRANSLATION	protein_coding	start/stop	-	5	339	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018548	Trim37	ENSMUST00000139532	ENSMUSP00000119269	TRANSLATION	protein_coding	stop	-	5	197	8	2.44	0	38.8	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000018548	Trim37	ENSMUST00000152637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000152611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000147798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000148154	ENSMUSP00000127554	TRANSLATION	protein_coding	stop	-	5	103	1	2.75	0	71.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017405	Nek8	ENSMUST00000017549	ENSMUSP00000017549	TRANSLATION	protein_coding	-	CCDS25091.1	1	698	17	10.23	5.1	390	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000017405	Nek8	ENSMUST00000141444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000142812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000131015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017405	Nek8	ENSMUST00000125528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000141353	ENSMUSP00000121553	TRANSLATION	protein_coding	stop	-	1	189	0	0	0	123.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000109532	ENSMUSP00000105158	TRANSLATION	protein_coding	-	CCDS36119.1	5	718	7	0	2.7	123.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000123909	ENSMUSP00000117103	TRANSLATION	protein_coding	start	-	3	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000180260	ENSMUSP00000136118	TRANSLATION	protein_coding	-	CCDS36119.1	1	718	7	0	2.7	123.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000093267	ENSMUSP00000090955	TRANSLATION	protein_coding	-	-	5	572	7	0	1.7	123.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000131612	ENSMUSP00000123000	TRANSLATION	protein_coding	stop	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000043356	ENSMUSP00000044265	TRANSLATION	protein_coding	-	CCDS36119.1	5	718	7	0	2.7	123.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000042208	0610010F05Rik	ENSMUST00000155903	ENSMUSP00000137799	TRANSLATION	nonsense_mediated_decay	-	-	1	713	7	0	0.5	123.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034209	Rasl10a	ENSMUST00000126974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034209	Rasl10a	ENSMUST00000037218	ENSMUSP00000048453	TRANSLATION	protein_coding	-	CCDS24394.1	1	203	15	1.88	6.5	69	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000020717	Pecam1	ENSMUST00000135481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020717	Pecam1	ENSMUST00000183610	ENSMUSP00000138959	TRANSLATION	protein_coding	-	CCDS79068.1	1	626	0	5.804	0.5	82.1	1	4,-1	-	-	10.002	MINOR
ENSMUSG00000020717	Pecam1	ENSMUST00000184424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020717	Pecam1	ENSMUST00000103069	ENSMUSP00000099358	TRANSLATION	protein_coding	-	CCDS25558.1	1	697	0	5.644	0.5	82.1	1	4,-1	-	-	9.678	MINOR
ENSMUSG00000020717	Pecam1	ENSMUST00000124958	ENSMUSP00000122414	TRANSLATION	protein_coding	stop	-	5	317	0	2.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020717	Pecam1	ENSMUST00000080853	ENSMUSP00000079664	TRANSLATION	protein_coding	-	CCDS25559.1	1	716	0	6.144	0.5	82.1	1	4,-1	-	-	10.68	MINOR
ENSMUSG00000020717	Pecam1	ENSMUST00000068021	ENSMUSP00000067111	TRANSLATION	protein_coding	-	-	2	732	0	6.474	0	82.1	1	4,-1	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000020717	Pecam1	ENSMUST00000106796	ENSMUSP00000102408	TRANSLATION	protein_coding	-	CCDS79069.1	1	727	0	6.804	0.5	82.1	1	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000036545	Adamts2	ENSMUST00000142118	ENSMUSP00000159176	TRANSLATION	protein_coding	-	-	1	1095	11	7.91	0	401.6	0	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000036545	Adamts2	ENSMUST00000125988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036545	Adamts2	ENSMUST00000127534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036545	Adamts2	ENSMUST00000040523	ENSMUSP00000040171	TRANSLATION	protein_coding	-	CCDS24636.1	1	1213	11	7.91	1.5	401.6	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000018862	Otop3	ENSMUST00000019006	ENSMUSP00000019006	TRANSLATION	protein_coding	-	CCDS25629.1	2	596	0	0	0.5	137.7	12	-4,-5	-	-	5.244	PRINCIPAL:3
ENSMUSG00000018862	Otop3	ENSMUST00000106543	ENSMUSP00000102153	TRANSLATION	protein_coding	-	CCDS83926.1	1	577	0	0	0.5	150.3	12	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000086545	Lrrc3c	ENSMUST00000142268	ENSMUSP00000147537	TRANSLATION	protein_coding	-	CCDS83891.1	3	255	0	0.48	0.5	61.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000617	Grm6	ENSMUST00000126890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000617	Grm6	ENSMUST00000156890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000617	Grm6	ENSMUST00000171427	ENSMUSP00000130728	TRANSLATION	protein_coding	-	CCDS48785.1	5	871	22	8.38	1.5	594.7	7	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000617	Grm6	ENSMUST00000000631	ENSMUSP00000000631	TRANSLATION	protein_coding	-	CCDS48785.1	5	871	22	8.38	1.5	594.7	7	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039781	Cep131	ENSMUST00000106229	ENSMUSP00000101836	TRANSLATION	protein_coding	-	-	1	1060	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039781	Cep131	ENSMUST00000180242	ENSMUSP00000136392	TRANSLATION	protein_coding	-	-	5	1060	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000039781	Cep131	ENSMUST00000156075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039781	Cep131	ENSMUST00000106227	ENSMUSP00000101834	TRANSLATION	protein_coding	-	CCDS36386.2	1	1059	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000039781	Cep131	ENSMUST00000144128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039781	Cep131	ENSMUST00000150463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039781	Cep131	ENSMUST00000145641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041189	Chrnb1	ENSMUST00000154816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041189	Chrnb1	ENSMUST00000147791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041189	Chrnb1	ENSMUST00000129381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041189	Chrnb1	ENSMUST00000045971	ENSMUSP00000047270	TRANSLATION	protein_coding	-	CCDS24910.1	1	501	0	9.15	0.5	460.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000070390	Nlrp1b	ENSMUST00000108515	ENSMUSP00000104155	TRANSLATION	protein_coding	-	CCDS48839.1	1	1177	7	4.28	0.5	563	0	-4,-5	-	-	17.496	ALTERNATIVE:2
ENSMUSG00000070390	Nlrp1b	ENSMUST00000136493	ENSMUSP00000121155	TRANSLATION	nonsense_mediated_decay	-	-	1	673	7	1.16	0	141	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000070390	Nlrp1b	ENSMUST00000094046	ENSMUSP00000091588	TRANSLATION	protein_coding	-	CCDS36210.1	5	1174	7	4.16	0.5	571.4	0	-4,-5	-	-	17.76	PRINCIPAL:3
ENSMUSG00000070390	Nlrp1b	ENSMUST00000108514	ENSMUSP00000104154	TRANSLATION	protein_coding	-	CCDS48839.1	5	1177	7	4.28	0.5	563	0	-4,-5	-	-	17.496	ALTERNATIVE:2
ENSMUSG00000070390	Nlrp1b	ENSMUST00000108516	ENSMUSP00000104156	TRANSLATION	protein_coding	-	CCDS36210.1	1	1174	7	4.16	0.5	571.4	0	-4,-5	-	-	17.76	PRINCIPAL:3
ENSMUSG00000035208	Slfn8	ENSMUST00000038141	ENSMUSP00000040060	TRANSLATION	protein_coding	-	CCDS25155.1	1	910	12	0	0.5	56.1	0	-4,-5	-	-	11.886	PRINCIPAL:1
ENSMUSG00000035208	Slfn8	ENSMUST00000108152	ENSMUSP00000103787	TRANSLATION	protein_coding	-	CCDS48869.1	1	407	0	0	0.5	57.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000035208	Slfn8	ENSMUST00000130822	ENSMUSP00000114417	TRANSLATION	protein_coding	stop	-	5	641	9	0	0	56.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035208	Slfn8	ENSMUST00000131883	ENSMUSP00000121831	TRANSLATION	protein_coding	start/stop	-	5	417	9	0	0	57.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035208	Slfn8	ENSMUST00000215239	ENSMUSP00000149800	TRANSLATION	protein_coding	-	CCDS48869.1	5	407	0	0	0.5	57.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000035208	Slfn8	ENSMUST00000092838	ENSMUSP00000090513	TRANSLATION	protein_coding	-	CCDS25155.1	5	910	12	0	0.5	56.1	0	-4,-5	-	-	11.886	PRINCIPAL:1
ENSMUSG00000014195	Dnajc7	ENSMUST00000239389	ENSMUSP00000159319	TRANSLATION	protein_coding	-	-	-	438	0	8.698	4.6	202.3	0	-4,-2	-	-	6.528	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000146840	ENSMUSP00000115438	TRANSLATION	protein_coding	-	-	5	478	0	10.096	4	260.2	0	-4,-7	-	-	12.591	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000136199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014195	Dnajc7	ENSMUST00000154972	ENSMUSP00000159367	TRANSLATION	protein_coding	-	-	3	159	0	4.15	0	57.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000129346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014195	Dnajc7	ENSMUST00000239453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014195	Dnajc7	ENSMUST00000148098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014195	Dnajc7	ENSMUST00000239490	ENSMUSP00000159332	TRANSLATION	protein_coding	-	-	-	484	0	9.898	0	260.2	0	-4,-6	-	-	11.16	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000239491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014195	Dnajc7	ENSMUST00000014339	ENSMUSP00000014339	TRANSLATION	protein_coding	-	CCDS25428.1	1	494	0	10.318	9.7	260.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000014195	Dnajc7	ENSMUST00000239410	ENSMUSP00000159311	TRANSLATION	protein_coding	-	-	-	579	0	10.318	1	260.2	0	-4,-7	-	-	12	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000137688	ENSMUSP00000159334	TRANSLATION	protein_coding	start/stop	-	5	315	0	6.368	0	112	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000132886	ENSMUSP00000159289	TRANSLATION	protein_coding	-	-	2	156	0	4.12	0	57.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000239426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014195	Dnajc7	ENSMUST00000239418	ENSMUSP00000159323	TRANSLATION	nonsense_mediated_decay	-	-	-	347	0	7.734	0	156.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000239482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014195	Dnajc7	ENSMUST00000239479	ENSMUSP00000159325	TRANSLATION	protein_coding	-	-	-	115	0	2.72	0	57.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000155152	ENSMUSP00000116793	TRANSLATION	protein_coding	stop	-	5	268	0	5.568	0	112	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000128414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014195	Dnajc7	ENSMUST00000239499	ENSMUSP00000159331	TRANSLATION	nonsense_mediated_decay	-	-	-	115	0	2.72	0	57.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000239494	ENSMUSP00000159285	TRANSLATION	nonsense_mediated_decay	start	-	-	104	0	2.064	0	58.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014195	Dnajc7	ENSMUST00000239391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000276	Dgke	ENSMUST00000107894	ENSMUSP00000103526	TRANSLATION	protein_coding	-	CCDS25234.1	5	564	18	0.4	7.5	277	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000000276	Dgke	ENSMUST00000000285	ENSMUSP00000000285	TRANSLATION	protein_coding	-	CCDS25234.1	1	564	18	0.4	7.5	277	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000000276	Dgke	ENSMUST00000152772	ENSMUSP00000116277	TRANSLATION	nonsense_mediated_decay	-	-	5	406	18	0.4	1	152.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020620	Abca8b	ENSMUST00000020948	ENSMUSP00000020948	TRANSLATION	protein_coding	-	CCDS25587.1	1	1620	24	11.04	0.5	319.5	12	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020620	Abca8b	ENSMUST00000106669	ENSMUSP00000102280	TRANSLATION	protein_coding	-	-	1	1558	24	11.04	0.5	285	10	-4,-7	-	-	15.93	MINOR
ENSMUSG00000020788	Atp2a3	ENSMUST00000021142	ENSMUSP00000021142	TRANSLATION	protein_coding	-	CCDS24991.1	1	1038	19	18.83	1.7	476.7	2	-4,-6	-	-	18.342	MINOR
ENSMUSG00000020788	Atp2a3	ENSMUST00000108485	ENSMUSP00000104125	TRANSLATION	protein_coding	-	CCDS48843.1	1	999	19	18.83	5.1	476.7	2	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000020788	Atp2a3	ENSMUST00000108484	ENSMUSP00000104124	TRANSLATION	protein_coding	-	-	5	981	19	18.33	0	476.7	2	-4,-6	-	-	16.998	MINOR
ENSMUSG00000020788	Atp2a3	ENSMUST00000135234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020788	Atp2a3	ENSMUST00000108486	ENSMUSP00000104126	TRANSLATION	protein_coding	-	-	5	1020	19	18.33	0	476.7	2	-4,-6	-	-	16.998	MINOR
ENSMUSG00000020788	Atp2a3	ENSMUST00000163326	ENSMUSP00000127036	TRANSLATION	protein_coding	-	CCDS48842.1	5	1026	19	18.83	0.5	476.7	2	-4,-6	-	-	18	MINOR
ENSMUSG00000020788	Atp2a3	ENSMUST00000149493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018554	Ybx2	ENSMUST00000148395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018554	Ybx2	ENSMUST00000130377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018554	Ybx2	ENSMUST00000149194	ENSMUSP00000136684	TRANSLATION	protein_coding	-	-	5	164	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000018554	Ybx2	ENSMUST00000018698	ENSMUSP00000018698	TRANSLATION	protein_coding	-	CCDS36200.1	1	359	0	2.68	1.5	90.4	0	-3,-5	-	-	11.784	PRINCIPAL:3
ENSMUSG00000018554	Ybx2	ENSMUST00000108601	ENSMUSP00000104242	TRANSLATION	protein_coding	-	CCDS83830.1	1	282	0	2.78	0.5	90.4	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000000120	Ngfr	ENSMUST00000000122	ENSMUSP00000000122	TRANSLATION	protein_coding	-	CCDS25279.1	1	427	0	4	3.9	118.7	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000037243	Zfp692	ENSMUST00000049353	ENSMUSP00000131896	TRANSLATION	protein_coding	-	CCDS36162.1	1	531	20	3.75	1.5	39.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037243	Zfp692	ENSMUST00000153510	ENSMUSP00000126674	TRANSLATION	protein_coding	-	CCDS36162.1	5	531	20	3.75	1.5	39.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000017404	Rpl19	ENSMUST00000134435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017404	Rpl19	ENSMUST00000092425	ENSMUSP00000103181	TRANSLATION	protein_coding	-	CCDS48900.1	3	194	0	4.4	17.5	225.4	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000017404	Rpl19	ENSMUST00000017548	ENSMUSP00000017548	TRANSLATION	protein_coding	-	CCDS25337.1	1	196	0	4.4	17.5	225.4	0	-4,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000018479	1700125H20Rik	ENSMUST00000100681	ENSMUSP00000098248	TRANSLATION	protein_coding	-	-	1	126	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000018479	1700125H20Rik	ENSMUST00000018623	ENSMUSP00000018623	TRANSLATION	protein_coding	-	CCDS48872.1	1	236	0	1.8	1.5	64.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020888	Dvl2	ENSMUST00000149477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020888	Dvl2	ENSMUST00000130820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020888	Dvl2	ENSMUST00000102575	ENSMUSP00000099635	TRANSLATION	nonsense_mediated_decay	-	-	1	736	0	7.6	1.5	677.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020888	Dvl2	ENSMUST00000019362	ENSMUSP00000019362	TRANSLATION	protein_coding	-	CCDS24930.1	1	736	0	7.6	1.5	677.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020888	Dvl2	ENSMUST00000152732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020888	Dvl2	ENSMUST00000190940	ENSMUSP00000140073	TRANSLATION	protein_coding	-	CCDS24930.1	1	736	0	7.6	1.5	677.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020888	Dvl2	ENSMUST00000135422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001510	Dlx3	ENSMUST00000092768	ENSMUSP00000090443	TRANSLATION	protein_coding	-	CCDS25272.1	1	287	0	1.2	8.8	160.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044795	Cyb5d1	ENSMUST00000134903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044795	Cyb5d1	ENSMUST00000108660	ENSMUSP00000104300	TRANSLATION	protein_coding	-	-	5	175	0	1.115	0	33.1	0	-4,-7	-	-	12	MINOR
ENSMUSG00000044795	Cyb5d1	ENSMUST00000051620	ENSMUSP00000059709	TRANSLATION	protein_coding	-	CCDS24892.1	1	228	0	1.115	5.1	33.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000000056	Narf	ENSMUST00000151088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000056	Narf	ENSMUST00000154047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000056	Narf	ENSMUST00000103015	ENSMUSP00000099304	TRANSLATION	protein_coding	-	CCDS25772.1	1	462	6	4.67	0.5	34.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000013646	Sh3bp5l	ENSMUST00000149701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013646	Sh3bp5l	ENSMUST00000116376	ENSMUSP00000112077	TRANSLATION	protein_coding	-	CCDS24728.1	1	392	0	0	5.1	318.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000013646	Sh3bp5l	ENSMUST00000127119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013646	Sh3bp5l	ENSMUST00000154278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013646	Sh3bp5l	ENSMUST00000073128	ENSMUSP00000072872	TRANSLATION	protein_coding	-	CCDS24728.1	1	392	0	0	5.1	318.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000049489	Ccnq	ENSMUST00000059468	ENSMUSP00000050658	TRANSLATION	protein_coding	-	CCDS25114.1	-	250	0	0.48	1.5	47.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020908	Myh3	ENSMUST00000007301	ENSMUSP00000007301	TRANSLATION	protein_coding	-	CCDS36184.1	5	1940	15	36.83	8.8	1537.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020908	Myh3	ENSMUST00000165221	ENSMUSP00000131883	TRANSLATION	protein_coding	-	CCDS36184.1	5	1940	15	36.83	8.8	1537.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020908	Myh3	ENSMUST00000108689	ENSMUSP00000104329	TRANSLATION	protein_coding	-	CCDS36184.1	5	1940	15	36.83	8.8	1537.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000006575	Rundc3a	ENSMUST00000146330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006575	Rundc3a	ENSMUST00000132876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006575	Rundc3a	ENSMUST00000150982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006575	Rundc3a	ENSMUST00000142157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006575	Rundc3a	ENSMUST00000107102	ENSMUSP00000102719	TRANSLATION	protein_coding	-	-	5	405	0	3.31	7.5	82.8	0	-4,-2	-	-	14.898	ALTERNATIVE:1
ENSMUSG00000006575	Rundc3a	ENSMUST00000107103	ENSMUSP00000102720	TRANSLATION	protein_coding	-	-	5	400	0	3.31	7.5	84.2	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000006575	Rundc3a	ENSMUST00000107105	ENSMUSP00000102722	TRANSLATION	protein_coding	-	CCDS56812.1	1	413	0	3.31	1.5	82.8	0	-4,-2	-	-	12.129	MINOR
ENSMUSG00000006575	Rundc3a	ENSMUST00000006750	ENSMUSP00000006750	TRANSLATION	protein_coding	-	CCDS25497.1	1	446	0	3.31	7.5	82.8	0	-4,-2	-	-	14.898	PRINCIPAL:2
ENSMUSG00000006575	Rundc3a	ENSMUST00000131219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006575	Rundc3a	ENSMUST00000128331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038700	Hoxb5	ENSMUST00000190470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038700	Hoxb5	ENSMUST00000049272	ENSMUSP00000035423	TRANSLATION	protein_coding	-	CCDS25296.1	1	269	0	1	8.8	76.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000053113	Socs3	ENSMUST00000132295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053113	Socs3	ENSMUST00000054002	ENSMUSP00000059129	TRANSLATION	protein_coding	-	CCDS25697.1	1	225	0	1	5.1	63.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000053113	Socs3	ENSMUST00000123255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050830	Vwc2	ENSMUST00000154155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050830	Vwc2	ENSMUST00000129670	ENSMUSP00000128761	TRANSLATION	nonsense_mediated_decay	-	-	1	324	0	0	3.9	35.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000050830	Vwc2	ENSMUST00000056344	ENSMUSP00000049692	TRANSLATION	protein_coding	-	CCDS36111.1	1	324	0	0	3.9	35.3	0	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000050830	Vwc2	ENSMUST00000109681	ENSMUSP00000105303	TRANSLATION	protein_coding	-	CCDS36111.1	1	324	0	0	3.9	35.3	0	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000035355	Kcnh4	ENSMUST00000107361	ENSMUSP00000102984	TRANSLATION	protein_coding	-	CCDS36334.1	5	1018	0	8.99	1.7	178.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035355	Kcnh4	ENSMUST00000107363	ENSMUSP00000102986	TRANSLATION	protein_coding	-	CCDS36334.1	5	1018	0	8.99	1.7	178.6	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033352	Map2k4	ENSMUST00000138093	ENSMUSP00000154113	TRANSLATION	protein_coding	stop	-	3	34	2	1.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033352	Map2k4	ENSMUST00000130009	ENSMUSP00000137819	TRANSLATION	nonsense_mediated_decay	-	-	3	101	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033352	Map2k4	ENSMUST00000140301	ENSMUSP00000137955	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033352	Map2k4	ENSMUST00000125598	ENSMUSP00000137656	TRANSLATION	protein_coding	start	-	5	130	6	3.5	0	93.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033352	Map2k4	ENSMUST00000152096	ENSMUSP00000114219	TRANSLATION	protein_coding	stop	-	2	206	16	3.7	0	50.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033352	Map2k4	ENSMUST00000140740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033352	Map2k4	ENSMUST00000046963	ENSMUSP00000041282	TRANSLATION	protein_coding	-	CCDS24844.1	1	397	21	8.78	1.5	204.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020696	Rffl	ENSMUST00000103218	ENSMUSP00000099507	TRANSLATION	protein_coding	-	-	1	293	8	2.9056	0	0	0	-4,-5	-	-	5.064	MINOR
ENSMUSG00000020696	Rffl	ENSMUST00000071152	ENSMUSP00000071150	TRANSLATION	protein_coding	-	CCDS48868.1	1	398	16	3.7056	1.5	46.9	0	-4,-7	-	-	18.188	MINOR
ENSMUSG00000020696	Rffl	ENSMUST00000093975	ENSMUSP00000091510	TRANSLATION	protein_coding	-	CCDS48867.1	1	377	16	3.7056	0.5	46.9	0	-4,-7	-	-	18	MINOR
ENSMUSG00000020696	Rffl	ENSMUST00000074515	ENSMUSP00000074108	TRANSLATION	protein_coding	-	CCDS25148.1	5	363	16	3.7056	6.3	46.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020696	Rffl	ENSMUST00000108173	ENSMUSP00000103808	TRANSLATION	protein_coding	-	CCDS25148.1	1	363	16	3.7056	6.3	46.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020696	Rffl	ENSMUST00000126660	ENSMUSP00000115846	TRANSLATION	protein_coding	stop	-	2	142	8	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020696	Rffl	ENSMUST00000021036	ENSMUSP00000021036	TRANSLATION	protein_coding	-	CCDS25149.1	1	335	16	3.7056	2.7	46.9	0	-4,-5	-	-	18.642	MINOR
ENSMUSG00000094805	Olfr311	ENSMUST00000214776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094805	Olfr311	ENSMUST00000071625	ENSMUSP00000071553	TRANSLATION	protein_coding	-	CCDS24750.1	-	308	0	0.2	2.7	174.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094805	Olfr311	ENSMUST00000216473	ENSMUSP00000150870	TRANSLATION	protein_coding	-	CCDS24750.1	5	308	0	0.2	2.7	174.6	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070394	Tmem256	ENSMUST00000133967	ENSMUSP00000114883	TRANSLATION	protein_coding	start	-	2	105	0	0	0	54.9	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000070394	Tmem256	ENSMUST00000094065	ENSMUSP00000091608	TRANSLATION	protein_coding	-	CCDS24915.1	1	113	0	0	2.7	61.7	3	0,3	-	-	6	PRINCIPAL:1
ENSMUSG00000070394	Tmem256	ENSMUST00000128281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070394	Tmem256	ENSMUST00000156556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070394	Tmem256	ENSMUST00000139085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020396	Nefh	ENSMUST00000093369	ENSMUSP00000091061	TRANSLATION	protein_coding	-	CCDS36099.1	2	1090	0	2	0.5	521.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040746	Rnf167	ENSMUST00000152160	ENSMUSP00000115057	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000040746	Rnf167	ENSMUST00000141537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040746	Rnf167	ENSMUST00000152276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040746	Rnf167	ENSMUST00000037534	ENSMUSP00000036472	TRANSLATION	protein_coding	-	CCDS24959.1	1	347	8	1.31	0.5	85.7	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000040746	Rnf167	ENSMUST00000151034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040746	Rnf167	ENSMUST00000131071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040746	Rnf167	ENSMUST00000152458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040746	Rnf167	ENSMUST00000141695	ENSMUSP00000121511	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000040746	Rnf167	ENSMUST00000143313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040746	Rnf167	ENSMUST00000141237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050538	B230217C12Rik	ENSMUST00000155954	ENSMUSP00000147634	TRANSLATION	protein_coding	-	-	1	25	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000050538	B230217C12Rik	ENSMUST00000054783	ENSMUSP00000127204	TRANSLATION	protein_coding	-	CCDS36298.1	5	139	3	0	0.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000050538	B230217C12Rik	ENSMUST00000164364	ENSMUSP00000147388	TRANSLATION	protein_coding	-	-	1	25	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000050538	B230217C12Rik	ENSMUST00000170806	ENSMUSP00000148116	TRANSLATION	protein_coding	-	-	1	25	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000052563	D930048N14Rik	ENSMUST00000064493	ENSMUSP00000069562	TRANSLATION	protein_coding	-	-	1	225	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:5
ENSMUSG00000052563	D930048N14Rik	ENSMUST00000117859	ENSMUSP00000113687	TRANSLATION	protein_coding	-	-	1	147	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000062421	Arf2	ENSMUST00000057921	ENSMUSP00000051814	TRANSLATION	protein_coding	-	CCDS25525.1	1	181	19	4.5	20.2	265	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000062421	Arf2	ENSMUST00000153092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062421	Arf2	ENSMUST00000154089	ENSMUSP00000120473	TRANSLATION	protein_coding	stop	-	3	101	4	1.7	0	67.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062421	Arf2	ENSMUST00000063347	ENSMUSP00000102622	TRANSLATION	protein_coding	-	CCDS25525.1	1	181	19	4.5	20.2	265	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020415	Pttg1	ENSMUST00000117446	ENSMUSP00000112841	TRANSLATION	protein_coding	-	CCDS24556.1	1	188	0	0	0.5	130.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000020415	Pttg1	ENSMUST00000150726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020415	Pttg1	ENSMUST00000140434	ENSMUSP00000122019	TRANSLATION	protein_coding	start	-	5	99	0	0	0	74.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020415	Pttg1	ENSMUST00000118368	ENSMUSP00000112834	TRANSLATION	protein_coding	-	CCDS48771.1	5	199	0	0	7.5	129.1	0	-4,-5	-	-	8.904	PRINCIPAL:1
ENSMUSG00000020415	Pttg1	ENSMUST00000020685	ENSMUSP00000020685	TRANSLATION	protein_coding	-	CCDS24556.1	2	188	0	0	0.5	130.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000020415	Pttg1	ENSMUST00000101340	ENSMUSP00000098894	TRANSLATION	protein_coding	-	CCDS48771.1	5	199	0	0	7.5	129.1	0	-4,-5	-	-	8.904	PRINCIPAL:1
ENSMUSG00000020415	Pttg1	ENSMUST00000152115	ENSMUSP00000119554	TRANSLATION	nonsense_mediated_decay	-	-	1	122	0	0	0	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020415	Pttg1	ENSMUST00000020687	ENSMUSP00000020687	TRANSLATION	protein_coding	-	CCDS48771.1	1	199	0	0	7.5	129.1	0	-4,-5	-	-	8.904	PRINCIPAL:1
ENSMUSG00000020415	Pttg1	ENSMUST00000121638	ENSMUSP00000112815	TRANSLATION	protein_coding	-	CCDS48771.1	1	199	0	0	7.5	129.1	0	-4,-5	-	-	8.904	PRINCIPAL:1
ENSMUSG00000020415	Pttg1	ENSMUST00000148130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034714	Ttyh2	ENSMUST00000141111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034714	Ttyh2	ENSMUST00000045779	ENSMUSP00000037821	TRANSLATION	protein_coding	-	CCDS25608.1	1	532	0	0	6.3	603.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000044068	Zrsr1	ENSMUST00000229075	-	NO_TRANSLATION	transcribed_processed_pseudogene
ENSMUSG00000044068	Zrsr1	ENSMUST00000230879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044068	Zrsr1	ENSMUST00000049506	ENSMUSP00000062025	TRANSLATION	protein_coding	-	CCDS36118.1	-	428	4	0.2	1.5	50.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000040350	Trim7	ENSMUST00000149049	ENSMUSP00000114958	TRANSLATION	protein_coding	stop	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040350	Trim7	ENSMUST00000046903	ENSMUSP00000039011	TRANSLATION	protein_coding	-	CCDS83797.1	5	510	16	4.236	3.9	208.5	0	-4,-5	-	-	19.348	PRINCIPAL:1
ENSMUSG00000040350	Trim7	ENSMUST00000109213	ENSMUSP00000104836	TRANSLATION	protein_coding	-	CCDS48779.1	1	303	0	3.216	5.3	123.9	0	-4,-5	-	-	6.884	MINOR
ENSMUSG00000040350	Trim7	ENSMUST00000216796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040350	Trim7	ENSMUST00000155478	ENSMUSP00000118669	TRANSLATION	nonsense_mediated_decay	-	-	5	243	16	1.02	0	84.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040350	Trim7	ENSMUST00000129674	ENSMUSP00000116067	TRANSLATION	protein_coding	stop	-	3	54	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040350	Trim7	ENSMUST00000131270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039253	Fn3krp	ENSMUST00000038096	ENSMUSP00000038061	TRANSLATION	protein_coding	-	CCDS25775.1	1	309	2	1.98	8.8	259.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000041797	Abca9	ENSMUST00000044850	ENSMUSP00000036338	TRANSLATION	protein_coding	-	CCDS25589.1	1	1623	20	10.55	0.5	339.8	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000041797	Abca9	ENSMUST00000126499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018449	Rpain	ENSMUST00000129531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000169965	ENSMUSP00000128903	TRANSLATION	protein_coding	-	CCDS56792.1	1	106	0	0	0.5	94.1	0	-4,-7	-	-	0.924	MINOR
ENSMUSG00000018449	Rpain	ENSMUST00000171254	ENSMUSP00000133243	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	0	0.5	93.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018449	Rpain	ENSMUST00000178822	ENSMUSP00000136592	TRANSLATION	protein_coding	-	CCDS56790.1	1	174	4	0	0.5	113.3	0	-4,-7	-	-	6.076	MINOR
ENSMUSG00000018449	Rpain	ENSMUST00000126815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000129540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000167509	ENSMUSP00000127315	TRANSLATION	protein_coding	-	CCDS56791.1	1	172	4	0	0.5	113.3	0	-4,-7	-	-	6.076	MINOR
ENSMUSG00000018449	Rpain	ENSMUST00000151608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000146788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000136665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018449	Rpain	ENSMUST00000018593	ENSMUSP00000018593	TRANSLATION	protein_coding	-	CCDS24969.1	1	219	4	0	3.9	178.7	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000018449	Rpain	ENSMUST00000154430	ENSMUSP00000137113	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	30.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018449	Rpain	ENSMUST00000108529	ENSMUSP00000104169	TRANSLATION	protein_coding	-	-	1	93	0	0	0	67.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000018567	Gabarap	ENSMUST00000139007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018567	Gabarap	ENSMUST00000018711	ENSMUSP00000018711	TRANSLATION	protein_coding	-	CCDS24928.1	1	117	0	3.83	19	163.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000018567	Gabarap	ENSMUST00000144443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018567	Gabarap	ENSMUST00000108592	ENSMUSP00000104233	TRANSLATION	protein_coding	-	-	3	106	0	2.404	0	69.8	0	-4,-5	-	-	3.528	MINOR
ENSMUSG00000020261	Slc36a1	ENSMUST00000152336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020261	Slc36a1	ENSMUST00000108872	ENSMUSP00000104500	TRANSLATION	protein_coding	-	CCDS36156.1	5	475	0	0	2.8	253.4	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020261	Slc36a1	ENSMUST00000108867	ENSMUSP00000104495	TRANSLATION	protein_coding	-	CCDS36156.1	1	475	0	0	2.8	253.4	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020261	Slc36a1	ENSMUST00000020499	ENSMUSP00000020499	TRANSLATION	protein_coding	-	CCDS36156.1	1	475	0	0	2.8	253.4	10	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020261	Slc36a1	ENSMUST00000147506	ENSMUSP00000121398	TRANSLATION	protein_coding	stop	-	5	164	0	0	0	77.2	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000051043	Gprc5c	ENSMUST00000136785	ENSMUSP00000116786	TRANSLATION	protein_coding	stop	-	3	283	0	0	0	99.3	14	4,-1	-	-	-1	MINOR
ENSMUSG00000051043	Gprc5c	ENSMUST00000021071	ENSMUSP00000021071	TRANSLATION	protein_coding	-	CCDS25612.1	1	440	0	0	1.5	110.9	15	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000051043	Gprc5c	ENSMUST00000053361	ENSMUSP00000061760	TRANSLATION	protein_coding	-	CCDS48978.1	1	441	0	0	1.5	110.9	15	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000051043	Gprc5c	ENSMUST00000122967	ENSMUSP00000114335	TRANSLATION	protein_coding	-	-	5	104	0	0	0	0	5	4,-1	-	-	0	MINOR
ENSMUSG00000051043	Gprc5c	ENSMUST00000177952	ENSMUSP00000136702	TRANSLATION	protein_coding	-	CCDS25612.1	1	440	0	0	1.5	110.9	15	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000051043	Gprc5c	ENSMUST00000133245	ENSMUSP00000121572	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	0	5	4,-1	-	-	-1	MINOR
ENSMUSG00000051043	Gprc5c	ENSMUST00000152314	ENSMUSP00000118667	TRANSLATION	protein_coding	start	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051043	Gprc5c	ENSMUST00000142262	ENSMUSP00000121524	TRANSLATION	protein_coding	stop	-	5	133	0	0	0	34.1	7	4,-1	-	-	-1	MINOR
ENSMUSG00000048732	Klhl11	ENSMUST00000056665	ENSMUSP00000054963	TRANSLATION	protein_coding	-	CCDS25424.1	1	709	0	1.6	1.5	190.3	0	0,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039275	Foxk2	ENSMUST00000151492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039275	Foxk2	ENSMUST00000153579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039275	Foxk2	ENSMUST00000106113	ENSMUSP00000101719	TRANSLATION	protein_coding	-	CCDS36393.2	1	651	0	2	0.5	176.5	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049506	Sppl2c	ENSMUST00000107000	ENSMUSP00000102613	TRANSLATION	protein_coding	-	CCDS36352.1	-	690	0	0	0.5	245.5	8	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000049506	Sppl2c	ENSMUST00000059448	ENSMUSP00000091453	TRANSLATION	protein_coding	-	CCDS36351.1	1	581	0	0	0.5	245.5	8	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000049354	Dcaf7	ENSMUST00000106891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049354	Dcaf7	ENSMUST00000058438	ENSMUSP00000058168	TRANSLATION	protein_coding	-	CCDS25546.1	1	342	0	2.28	19.5	15	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020741	Cluh	ENSMUST00000092915	ENSMUSP00000090593	TRANSLATION	protein_coding	-	CCDS36223.1	1	1353	0	2.69	2.7	550.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020741	Cluh	ENSMUST00000130398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020741	Cluh	ENSMUST00000128155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020741	Cluh	ENSMUST00000117818	ENSMUSP00000113371	TRANSLATION	protein_coding	-	-	1	1302	0	2.69	0	490.3	0	-4,-5	-	-	8.394	MINOR
ENSMUSG00000020741	Cluh	ENSMUST00000155558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020741	Cluh	ENSMUST00000127679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033044	Dhrs7c	ENSMUST00000142686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033044	Dhrs7c	ENSMUST00000168612	ENSMUSP00000130924	TRANSLATION	protein_coding	-	CCDS48822.1	5	311	30	4	10.4	136.4	0	1,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000033044	Dhrs7c	ENSMUST00000149722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033044	Dhrs7c	ENSMUST00000123862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033044	Dhrs7c	ENSMUST00000135830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020834	Dhrs13	ENSMUST00000092881	ENSMUSP00000090557	TRANSLATION	protein_coding	stop	-	3	116	11	2.21	0	35.8	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000020834	Dhrs13	ENSMUST00000144028	ENSMUSP00000114674	TRANSLATION	nonsense_mediated_decay	-	-	1	47	0	0.6	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000020834	Dhrs13	ENSMUST00000122342	ENSMUSP00000112553	TRANSLATION	protein_coding	-	-	1	326	24	2.7	0	62.6	0	-4,0	-	-	10.224	MINOR
ENSMUSG00000020834	Dhrs13	ENSMUST00000021187	ENSMUSP00000021187	TRANSLATION	protein_coding	-	CCDS36236.1	1	376	29	3.63	0.5	105.6	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034940	Synrg	ENSMUST00000132887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034940	Synrg	ENSMUST00000148901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034940	Synrg	ENSMUST00000183456	ENSMUSP00000138969	TRANSLATION	protein_coding	-	-	5	1329	4	2.55	0.5	0	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000034940	Synrg	ENSMUST00000138676	ENSMUSP00000117709	TRANSLATION	protein_coding	start/stop	-	5	256	0	2.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034940	Synrg	ENSMUST00000142966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034940	Synrg	ENSMUST00000049714	ENSMUSP00000059000	TRANSLATION	protein_coding	-	-	5	1306	4	2.55	0	0	0	-3,-1	-	-	10	ALTERNATIVE:2
ENSMUSG00000034940	Synrg	ENSMUST00000183714	ENSMUSP00000139103	TRANSLATION	protein_coding	-	-	5	1216	4	2.55	0	0	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000034940	Synrg	ENSMUST00000184239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034940	Synrg	ENSMUST00000092834	ENSMUSP00000090510	TRANSLATION	protein_coding	-	CCDS25181.1	1	1138	4	2.55	0.5	0	0	-4,-7	-	-	10	PRINCIPAL:2
ENSMUSG00000010841	Cfap97d1	ENSMUST00000176722	ENSMUSP00000134890	TRANSLATION	protein_coding	-	-	3	113	0	0	0	53.4	0	-4,-5	-	-	4.278	MINOR
ENSMUSG00000010841	Cfap97d1	ENSMUST00000010985	ENSMUSP00000010985	TRANSLATION	protein_coding	-	CCDS48938.1	1	164	0	0	8.8	74.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000010841	Cfap97d1	ENSMUST00000175972	ENSMUSP00000135566	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018378	Cuedc1	ENSMUST00000133149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018378	Cuedc1	ENSMUST00000018522	ENSMUSP00000018522	TRANSLATION	protein_coding	-	CCDS25226.1	1	388	0	1	1.5	52.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000018378	Cuedc1	ENSMUST00000154812	ENSMUSP00000120867	TRANSLATION	nonsense_mediated_decay	-	-	1	316	0	1	0	52.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018378	Cuedc1	ENSMUST00000125297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018378	Cuedc1	ENSMUST00000132377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018378	Cuedc1	ENSMUST00000142564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018378	Cuedc1	ENSMUST00000131964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020817	Rabep1	ENSMUST00000100928	ENSMUSP00000098488	TRANSLATION	protein_coding	-	-	5	827	0	4	0	1390.6	0	-4,-5	-	-	5.034	MINOR
ENSMUSG00000020817	Rabep1	ENSMUST00000142220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020817	Rabep1	ENSMUST00000108533	ENSMUSP00000104173	TRANSLATION	protein_coding	-	-	1	864	0	5.4	8.3	1453.3	0	-4,-5	-	-	14.598	ALTERNATIVE:1
ENSMUSG00000020817	Rabep1	ENSMUST00000076270	ENSMUSP00000075619	TRANSLATION	protein_coding	-	CCDS24968.1	1	862	0	5.4	8.3	1460	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000020817	Rabep1	ENSMUST00000177731	ENSMUSP00000136069	TRANSLATION	protein_coding	-	CCDS78985.1	1	778	0	5.4	3.9	1321.4	0	-4,-5	-	-	7.191	MINOR
ENSMUSG00000020817	Rabep1	ENSMUST00000178245	ENSMUSP00000137267	TRANSLATION	protein_coding	-	CCDS70232.1	1	819	0	5.4	5.3	1372.2	0	-4,-5	-	-	8.499	MINOR
ENSMUSG00000020817	Rabep1	ENSMUST00000179114	ENSMUSP00000136369	TRANSLATION	protein_coding	-	-	1	243	0	0	0	411.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020817	Rabep1	ENSMUST00000081362	ENSMUSP00000080102	TRANSLATION	protein_coding	-	CCDS78984.1	1	822	0	5.4	0.5	1028.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000017344	Vtn	ENSMUST00000146997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017344	Vtn	ENSMUST00000017488	ENSMUSP00000017488	TRANSLATION	protein_coding	-	CCDS25106.1	1	478	7	2.71	0.5	221.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000017344	Vtn	ENSMUST00000153628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017344	Vtn	ENSMUST00000128479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020913	Krt24	ENSMUST00000017255	ENSMUSP00000017255	TRANSLATION	protein_coding	-	CCDS36305.1	1	512	0	4.14	0.5	360.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020474	Polm	ENSMUST00000109837	ENSMUSP00000105463	TRANSLATION	protein_coding	-	-	5	511	6	8.99	0	148.5	0	-4,0	-	-	11.202	MINOR
ENSMUSG00000020474	Polm	ENSMUST00000153987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020474	Polm	ENSMUST00000143478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020474	Polm	ENSMUST00000124564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020474	Polm	ENSMUST00000020767	ENSMUSP00000020767	TRANSLATION	protein_coding	-	CCDS24405.1	1	496	6	10.25	1.5	219.8	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000020474	Polm	ENSMUST00000156913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002812	Flii	ENSMUST00000137226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002812	Flii	ENSMUST00000002889	ENSMUSP00000002889	TRANSLATION	protein_coding	-	CCDS24795.1	1	1271	0	16.93	1.5	310.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002812	Flii	ENSMUST00000154141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002812	Flii	ENSMUST00000154465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000162338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000147701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000124965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056938	Acbd4	ENSMUST00000092559	ENSMUSP00000090220	TRANSLATION	nonsense_mediated_decay	-	-	1	86	13	1.95	0	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056938	Acbd4	ENSMUST00000139374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056938	Acbd4	ENSMUST00000129870	ENSMUSP00000116755	TRANSLATION	nonsense_mediated_decay	-	-	5	86	13	1.95	0	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056938	Acbd4	ENSMUST00000142630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000150780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000024492	ENSMUSP00000024492	TRANSLATION	protein_coding	-	-	5	327	14	3.18	1.5	82.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056938	Acbd4	ENSMUST00000134884	ENSMUSP00000120031	TRANSLATION	protein_coding	stop	-	5	54	3	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056938	Acbd4	ENSMUST00000161013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056938	Acbd4	ENSMUST00000130749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056938	Acbd4	ENSMUST00000152971	ENSMUSP00000118886	TRANSLATION	protein_coding	stop	-	3	109	3	2.18	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056938	Acbd4	ENSMUST00000140372	ENSMUSP00000115521	TRANSLATION	protein_coding	stop	-	5	172	3	2.18	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056938	Acbd4	ENSMUST00000146176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056938	Acbd4	ENSMUST00000107040	ENSMUSP00000102655	TRANSLATION	protein_coding	-	-	2	287	3	2.18	0	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000018446	C1qbp	ENSMUST00000179291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018446	C1qbp	ENSMUST00000155371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018446	C1qbp	ENSMUST00000078528	ENSMUSP00000077612	TRANSLATION	protein_coding	-	CCDS24970.1	1	279	0	4.8	3.9	145.3	0	-2,1	-	-	13	PRINCIPAL:1
ENSMUSG00000057723	Krt33b	ENSMUST00000073890	ENSMUSP00000073552	TRANSLATION	protein_coding	-	CCDS48928.1	1	404	0	3.76	6.3	362.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020839	Tmigd1	ENSMUST00000102495	ENSMUSP00000099553	TRANSLATION	protein_coding	-	CCDS25072.1	1	261	0	2.785	1.5	54.6	1	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020839	Tmigd1	ENSMUST00000142166	ENSMUSP00000121222	TRANSLATION	protein_coding	stop	-	2	140	0	1.245	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000020839	Tmigd1	ENSMUST00000136899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020839	Tmigd1	ENSMUST00000072633	ENSMUSP00000072427	TRANSLATION	protein_coding	-	CCDS25072.1	1	261	0	2.785	1.5	54.6	1	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034706	Dnaic2	ENSMUST00000069325	ENSMUSP00000065787	TRANSLATION	protein_coding	-	CCDS36366.1	5	623	0	2.3	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034706	Dnaic2	ENSMUST00000136403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034706	Dnaic2	ENSMUST00000141762	ENSMUSP00000114700	TRANSLATION	protein_coding	stop	-	5	562	0	2.02	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034706	Dnaic2	ENSMUST00000130692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034706	Dnaic2	ENSMUST00000144872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034706	Dnaic2	ENSMUST00000092469	ENSMUSP00000090126	TRANSLATION	protein_coding	-	CCDS36366.1	5	623	0	2.3	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034706	Dnaic2	ENSMUST00000151053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001053	N4bp3	ENSMUST00000156835	ENSMUSP00000123658	TRANSLATION	protein_coding	stop	-	2	150	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001053	N4bp3	ENSMUST00000142721	ENSMUSP00000122860	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001053	N4bp3	ENSMUST00000001080	ENSMUSP00000001080	TRANSLATION	protein_coding	-	CCDS24657.1	1	537	0	0	1.5	142.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034354	Mtmr3	ENSMUST00000123506	ENSMUSP00000122422	TRANSLATION	protein_coding	start	-	5	1195	7	8.92	1.5	526.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034354	Mtmr3	ENSMUST00000040448	ENSMUSP00000049079	TRANSLATION	protein_coding	-	CCDS48744.1	5	1159	7	8.6	1.5	526.6	0	-4,-5	-	-	17.358	PRINCIPAL:1
ENSMUSG00000034354	Mtmr3	ENSMUST00000144242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034354	Mtmr3	ENSMUST00000130716	ENSMUSP00000137687	TRANSLATION	nonsense_mediated_decay	-	-	1	1075	7	6.96	0	461	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034354	Mtmr3	ENSMUST00000155566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034354	Mtmr3	ENSMUST00000128256	ENSMUSP00000116315	TRANSLATION	protein_coding	start	-	5	1167	7	8.435	1.5	509	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034354	Mtmr3	ENSMUST00000109943	ENSMUSP00000105569	TRANSLATION	protein_coding	-	CCDS48744.1	1	1159	7	8.6	1.5	526.6	0	-4,-5	-	-	17.358	PRINCIPAL:1
ENSMUSG00000036216	Leap2	ENSMUST00000036045	ENSMUSP00000044166	TRANSLATION	protein_coding	-	CCDS36150.1	1	76	0	1.33	9.8	140.1	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000064090	Vrk2	ENSMUST00000125545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064090	Vrk2	ENSMUST00000124294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064090	Vrk2	ENSMUST00000155728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064090	Vrk2	ENSMUST00000156264	ENSMUSP00000119928	TRANSLATION	protein_coding	stop	-	3	111	0	3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064090	Vrk2	ENSMUST00000133487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064090	Vrk2	ENSMUST00000109504	ENSMUSP00000105130	TRANSLATION	protein_coding	-	CCDS24486.1	1	503	0	8.77	1.5	61.2	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000064090	Vrk2	ENSMUST00000078362	ENSMUSP00000077471	TRANSLATION	protein_coding	-	CCDS24486.1	1	503	0	8.77	1.5	61.2	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034570	Inpp5j	ENSMUST00000044507	ENSMUSP00000046625	TRANSLATION	protein_coding	-	CCDS24364.1	1	1003	8	5.78	1.5	29.4	0	-4,-7	-	-	17.358	PRINCIPAL:1
ENSMUSG00000034570	Inpp5j	ENSMUST00000148939	ENSMUSP00000139214	TRANSLATION	protein_coding	start	-	1	548	8	6.1	0	29.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034570	Inpp5j	ENSMUST00000154756	ENSMUSP00000139302	TRANSLATION	non_stop_decay	stop	-	1	899	8	5.78	0	29.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034570	Inpp5j	ENSMUST00000183684	ENSMUSP00000139000	TRANSLATION	nonsense_mediated_decay	-	-	2	41	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034570	Inpp5j	ENSMUST00000110018	ENSMUSP00000105645	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034570	Inpp5j	ENSMUST00000110019	ENSMUSP00000105646	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034947	Tmem106a	ENSMUST00000143045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034947	Tmem106a	ENSMUST00000100403	ENSMUSP00000097971	TRANSLATION	protein_coding	-	CCDS25476.1	5	261	3	0	5.1	366.9	1	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000034947	Tmem106a	ENSMUST00000128659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034947	Tmem106a	ENSMUST00000107194	ENSMUSP00000102812	TRANSLATION	protein_coding	stop	-	2	171	3	0	0	235.9	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000034947	Tmem106a	ENSMUST00000128614	ENSMUSP00000122218	TRANSLATION	protein_coding	stop	-	3	156	3	0	0	213.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000034947	Tmem106a	ENSMUST00000039581	ENSMUSP00000045832	TRANSLATION	protein_coding	-	CCDS25476.1	1	261	3	0	5.1	366.9	1	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000038195	Rilp	ENSMUST00000156923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038195	Rilp	ENSMUST00000042972	ENSMUSP00000037238	TRANSLATION	protein_coding	-	CCDS25049.1	1	369	0	2	1.5	117.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000001027	Scn4a	ENSMUST00000021056	ENSMUSP00000021056	TRANSLATION	protein_coding	-	CCDS48961.1	1	1841	0	7.64	1.5	1053.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001027	Scn4a	ENSMUST00000174877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018362	Kpna2	ENSMUST00000018506	ENSMUSP00000018506	TRANSLATION	protein_coding	-	CCDS25565.1	1	529	0	10.83	10.8	478	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018362	Kpna2	ENSMUST00000156495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018362	Kpna2	ENSMUST00000124541	ENSMUSP00000114636	TRANSLATION	protein_coding	stop	-	2	170	0	4.08	0	145.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018362	Kpna2	ENSMUST00000140362	ENSMUSP00000118679	TRANSLATION	protein_coding	start/stop	-	3	189	0	4.08	0	145.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018362	Kpna2	ENSMUST00000106768	ENSMUSP00000102379	TRANSLATION	protein_coding	-	-	2	80	0	1.816	0	80.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000018362	Kpna2	ENSMUST00000145331	ENSMUSP00000122983	TRANSLATION	nonsense_mediated_decay	-	-	1	75	0	1.75	0	80.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018362	Kpna2	ENSMUST00000144834	ENSMUSP00000121655	TRANSLATION	protein_coding	stop	-	3	163	0	3.75	0	145.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020701	Tmem132e	ENSMUST00000202598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020701	Tmem132e	ENSMUST00000054245	ENSMUSP00000052484	TRANSLATION	protein_coding	-	CCDS25144.2	1	1074	0	0	3.9	719.7	1	0,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000020701	Tmem132e	ENSMUST00000092852	ENSMUSP00000090528	TRANSLATION	protein_coding	-	-	2	982	0	0	1	718.1	1	0,-5	-	-	5.904	ALTERNATIVE:2
ENSMUSG00000020701	Tmem132e	ENSMUST00000132477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000108682	ENSMUSP00000104322	TRANSLATION	protein_coding	-	CCDS48821.1	1	416	0	5.99	5.1	246.1	0	-4,-5	-	-	9.093	MINOR
ENSMUSG00000033066	Gas7	ENSMUST00000140863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000136796	ENSMUSP00000159284	TRANSLATION	nonsense_mediated_decay	-	-	3	159	0	2.7	0	94.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033066	Gas7	ENSMUST00000133367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000041611	ENSMUSP00000038420	TRANSLATION	protein_coding	-	CCDS70210.1	1	412	0	5.99	7.5	246.1	0	-4,-5	-	-	10.2	MINOR
ENSMUSG00000033066	Gas7	ENSMUST00000108681	ENSMUSP00000104321	TRANSLATION	protein_coding	-	-	5	476	0	6.99	6.3	292.8	0	-4,-1	-	-	14.445	PRINCIPAL:1
ENSMUSG00000033066	Gas7	ENSMUST00000129801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000108680	ENSMUSP00000104320	TRANSLATION	protein_coding	-	CCDS70210.1	1	412	0	5.99	7.5	246.1	0	-4,-5	-	-	10.2	MINOR
ENSMUSG00000033066	Gas7	ENSMUST00000147276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000145496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033066	Gas7	ENSMUST00000151784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085683	Tmem238l	ENSMUST00000211300	ENSMUSP00000147820	TRANSLATION	protein_coding	-	-	3	79	0	0	0	92.1	3	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000085683	Tmem238l	ENSMUST00000127166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085683	Tmem238l	ENSMUST00000150220	ENSMUSP00000147625	TRANSLATION	protein_coding	start	-	3	76	0	0	0	92.1	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000062204	Olfr1373	ENSMUST00000078264	ENSMUSP00000077384	TRANSLATION	protein_coding	-	CCDS24667.1	-	311	0	0.36	5.1	155.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000055937	Krt28	ENSMUST00000006963	ENSMUSP00000006963	TRANSLATION	protein_coding	-	CCDS48906.1	1	462	0	3.98	2.7	323.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000007646	Rad51c	ENSMUST00000129400	ENSMUSP00000121928	TRANSLATION	nonsense_mediated_decay	-	-	5	125	6	1.2	0	29.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007646	Rad51c	ENSMUST00000067692	ENSMUSP00000064079	TRANSLATION	protein_coding	-	CCDS25212.1	1	366	7	4.77	3.5	148.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000007646	Rad51c	ENSMUST00000153073	ENSMUSP00000122811	TRANSLATION	nonsense_mediated_decay	-	-	1	338	7	3.82	0	131.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007646	Rad51c	ENSMUST00000007790	ENSMUSP00000007790	TRANSLATION	protein_coding	-	CCDS79013.1	1	384	7	4.17	0.5	148.5	0	-3,-1	-	-	16.8	MINOR
ENSMUSG00000001240	Ramp2	ENSMUST00000122006	ENSMUSP00000114061	TRANSLATION	protein_coding	-	-	2	105	0	1.1	0	0	0	1,2	-	-	3.144	MINOR
ENSMUSG00000001240	Ramp2	ENSMUST00000149585	ENSMUSP00000116331	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	0.2	0	0	0	1,2	-	-	-1	MINOR
ENSMUSG00000001240	Ramp2	ENSMUST00000151830	ENSMUSP00000123150	TRANSLATION	protein_coding	stop	-	3	81	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001240	Ramp2	ENSMUST00000138229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001240	Ramp2	ENSMUST00000129680	ENSMUSP00000122072	TRANSLATION	protein_coding	-	CCDS25457.1	1	189	0	2.1	0.5	133.1	1	1,2	-	-	12	PRINCIPAL:1
ENSMUSG00000001240	Ramp2	ENSMUST00000107282	ENSMUSP00000102903	TRANSLATION	protein_coding	start/stop	-	3	141	0	2.1	0	133.1	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000001240	Ramp2	ENSMUST00000149006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001240	Ramp2	ENSMUST00000128260	ENSMUSP00000127718	TRANSLATION	nonsense_mediated_decay	-	-	2	103	0	0.2	0	0	0	1,2	-	-	-1	MINOR
ENSMUSG00000018861	Fdxr	ENSMUST00000021078	ENSMUSP00000021078	TRANSLATION	protein_coding	-	CCDS25625.1	1	494	48	10.75	6.3	0	0	-3,0	-	-	14	PRINCIPAL:1
ENSMUSG00000018861	Fdxr	ENSMUST00000139437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018861	Fdxr	ENSMUST00000155130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018861	Fdxr	ENSMUST00000147500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020827	Mink1	ENSMUST00000072237	ENSMUSP00000072091	TRANSLATION	protein_coding	-	CCDS48837.1	5	1344	18	8.41	1.7	402.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020827	Mink1	ENSMUST00000178764	ENSMUSP00000136149	TRANSLATION	protein_coding	start/stop	-	3	259	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020827	Mink1	ENSMUST00000102558	ENSMUSP00000099618	TRANSLATION	protein_coding	-	CCDS24954.1	1	1300	18	8.41	0.5	402.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020827	Mink1	ENSMUST00000132208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020827	Mink1	ENSMUST00000149845	ENSMUSP00000137075	TRANSLATION	nonsense_mediated_decay	start	-	5	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020827	Mink1	ENSMUST00000142650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020827	Mink1	ENSMUST00000152857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020827	Mink1	ENSMUST00000072873	ENSMUSP00000072649	TRANSLATION	protein_coding	-	CCDS36205.1	5	1337	18	8.41	0.5	402.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020827	Mink1	ENSMUST00000136663	ENSMUSP00000117959	TRANSLATION	protein_coding	start	-	1	1198	4	4.33	0	298	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020827	Mink1	ENSMUST00000102559	ENSMUSP00000099619	TRANSLATION	protein_coding	-	CCDS24955.1	1	1308	18	8.41	0.5	402.5	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000020827	Mink1	ENSMUST00000153503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020827	Mink1	ENSMUST00000079244	ENSMUSP00000078234	TRANSLATION	protein_coding	-	-	1	1334	18	8.41	0.5	402.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020827	Mink1	ENSMUST00000133310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020687	Cdc27	ENSMUST00000127506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020687	Cdc27	ENSMUST00000106962	ENSMUSP00000102575	TRANSLATION	protein_coding	-	-	5	831	0	17.415	5.3	175.8	0	-4,-5	-	-	13.323	MINOR
ENSMUSG00000020687	Cdc27	ENSMUST00000106961	ENSMUSP00000102574	TRANSLATION	protein_coding	-	-	1	399	0	8.915	0	83.4	0	-4,-5	-	-	0.456	MINOR
ENSMUSG00000020687	Cdc27	ENSMUST00000093923	ENSMUSP00000091452	TRANSLATION	protein_coding	-	CCDS36354.1	1	825	0	17.58	8.8	175.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020687	Cdc27	ENSMUST00000135303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046311	Zfp62	ENSMUST00000109198	ENSMUSP00000104821	TRANSLATION	protein_coding	-	CCDS24601.1	1	907	104	0.9	0.5	533.7	0	-4,-5	-	-	16.908	PRINCIPAL:1
ENSMUSG00000046311	Zfp62	ENSMUST00000128932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046311	Zfp62	ENSMUST00000109197	ENSMUSP00000104820	TRANSLATION	protein_coding	-	CCDS24601.1	1	907	104	0.9	0.5	533.7	0	-4,-5	-	-	16.908	PRINCIPAL:1
ENSMUSG00000046311	Zfp62	ENSMUST00000157023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046311	Zfp62	ENSMUST00000133150	ENSMUSP00000115576	TRANSLATION	protein_coding	stop	-	1	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000150284	ENSMUSP00000121132	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000136539	ENSMUSP00000116045	TRANSLATION	protein_coding	stop	-	1	893	104	0.9	0	533.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000061757	ENSMUSP00000056226	TRANSLATION	protein_coding	-	CCDS24601.1	1	907	104	0.9	0.5	533.7	0	-4,-5	-	-	16.908	PRINCIPAL:1
ENSMUSG00000046311	Zfp62	ENSMUST00000151228	ENSMUSP00000117774	TRANSLATION	protein_coding	stop	-	3	195	10	1.1	0	60.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000137061	ENSMUSP00000114147	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000136691	ENSMUSP00000115849	TRANSLATION	protein_coding	stop	-	3	80	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046311	Zfp62	ENSMUST00000180016	ENSMUSP00000137583	TRANSLATION	protein_coding	-	CCDS24601.1	5	907	104	0.9	0.5	533.7	0	-4,-5	-	-	16.908	PRINCIPAL:1
ENSMUSG00000046215	Rprml	ENSMUST00000057870	ENSMUSP00000053993	TRANSLATION	protein_coding	-	CCDS25520.1	-	117	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000055010	A830031A19Rik	ENSMUST00000068360	ENSMUSP00000063283	TRANSLATION	protein_coding	-	-	1	113	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000018698	Lhx1	ENSMUST00000176503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018698	Lhx1	ENSMUST00000092827	ENSMUSP00000090503	TRANSLATION	protein_coding	stop	-	3	112	8	2.1	0	67.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018698	Lhx1	ENSMUST00000018842	ENSMUSP00000018842	TRANSLATION	protein_coding	-	CCDS25187.1	1	406	16	4.2	12	190.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000018698	Lhx1	ENSMUST00000184646	ENSMUSP00000138899	TRANSLATION	protein_coding	-	-	5	315	3	2.2	2	70.2	0	-4,-5	-	-	2.362	MINOR
ENSMUSG00000025380	Fscn2	ENSMUST00000152556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025380	Fscn2	ENSMUST00000026445	ENSMUSP00000026445	TRANSLATION	protein_coding	-	CCDS25731.1	1	492	0	5	7.5	371	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025380	Fscn2	ENSMUST00000130476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018565	Elp5	ENSMUST00000108594	ENSMUSP00000104235	TRANSLATION	protein_coding	-	CCDS24926.1	1	300	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000018565	Elp5	ENSMUST00000108595	ENSMUSP00000104236	TRANSLATION	protein_coding	stop	-	5	140	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018565	Elp5	ENSMUST00000143788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018565	Elp5	ENSMUST00000127437	ENSMUSP00000136578	TRANSLATION	nonsense_mediated_decay	start	-	3	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018565	Elp5	ENSMUST00000123701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018565	Elp5	ENSMUST00000142788	ENSMUSP00000136063	TRANSLATION	nonsense_mediated_decay	-	-	3	63	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018565	Elp5	ENSMUST00000143175	ENSMUSP00000136484	TRANSLATION	protein_coding	stop	-	2	23	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000018565	Elp5	ENSMUST00000138562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018565	Elp5	ENSMUST00000151766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018565	Elp5	ENSMUST00000147437	ENSMUSP00000117394	TRANSLATION	protein_coding	stop	-	3	115	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017466	Timp2	ENSMUST00000155707	ENSMUSP00000122642	TRANSLATION	protein_coding	stop	-	3	143	0	3	2	165	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017466	Timp2	ENSMUST00000017610	ENSMUSP00000017610	TRANSLATION	protein_coding	-	CCDS25699.1	1	220	0	5	8.8	248.8	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000039110	Mycbpap	ENSMUST00000040692	ENSMUSP00000047579	TRANSLATION	protein_coding	-	-	1	414	0	0	0	73	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039110	Mycbpap	ENSMUST00000239238	ENSMUSP00000159222	TRANSLATION	protein_coding	-	-	-	942	0	0	0	480.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000039110	Mycbpap	ENSMUST00000149872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039110	Mycbpap	ENSMUST00000123496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039110	Mycbpap	ENSMUST00000139432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039110	Mycbpap	ENSMUST00000093945	ENSMUSP00000091477	TRANSLATION	protein_coding	-	CCDS48887.1	5	932	0	0	0.5	480.3	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000039110	Mycbpap	ENSMUST00000151993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000275	Trim25	ENSMUST00000000284	ENSMUSP00000000284	TRANSLATION	protein_coding	-	-	1	626	16	6.76	0	139.4	0	-4,-5	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000000275	Trim25	ENSMUST00000100627	ENSMUSP00000098192	TRANSLATION	protein_coding	-	-	5	387	16	4.28	0	41.1	0	-4,-5	-	-	6.48	MINOR
ENSMUSG00000000275	Trim25	ENSMUST00000107896	ENSMUSP00000103528	TRANSLATION	protein_coding	-	CCDS36278.1	1	634	16	7.09	0.5	139.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000020793	Galr2	ENSMUST00000055872	ENSMUSP00000054062	TRANSLATION	protein_coding	-	CCDS25663.1	1	371	0	1.4	1.5	171.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020793	Galr2	ENSMUST00000154277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049041	Olfr398	ENSMUST00000053874	ENSMUSP00000059548	TRANSLATION	protein_coding	-	CCDS25022.1	-	314	0	0.42	3.9	169.2	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000049041	Olfr398	ENSMUST00000117510	ENSMUSP00000113005	TRANSLATION	protein_coding	-	CCDS25022.1	3	314	0	0.42	3.9	169.2	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000049041	Olfr398	ENSMUST00000214334	ENSMUSP00000149170	TRANSLATION	protein_coding	-	CCDS25022.1	5	314	0	0.42	3.9	169.2	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044170	Olfr1384	ENSMUST00000213776	ENSMUSP00000149183	TRANSLATION	protein_coding	-	CCDS24613.1	5	318	0	0.32	0.5	161.9	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044170	Olfr1384	ENSMUST00000060434	ENSMUSP00000051954	TRANSLATION	protein_coding	-	CCDS24613.1	-	318	0	0.32	0.5	161.9	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057181	5730455P16Rik	ENSMUST00000149614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057181	5730455P16Rik	ENSMUST00000103225	ENSMUSP00000099515	TRANSLATION	protein_coding	-	CCDS25132.1	1	393	2	0	2.7	665.8	0	-4,-5	-	-	8	PRINCIPAL:2
ENSMUSG00000057181	5730455P16Rik	ENSMUST00000179332	ENSMUSP00000135972	TRANSLATION	protein_coding	-	-	5	393	2	0	2.7	665.8	0	-4,-5	-	-	8	ALTERNATIVE:2
ENSMUSG00000057181	5730455P16Rik	ENSMUST00000134274	ENSMUSP00000120606	TRANSLATION	protein_coding	stop	-	5	214	2	0	0	241.7	0	-2,2	-	-	-1	MINOR
ENSMUSG00000018217	Pmp22	ENSMUST00000140648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018217	Pmp22	ENSMUST00000108700	ENSMUSP00000104340	TRANSLATION	protein_coding	-	CCDS24837.1	1	160	0	1.88	4.2	163.2	3	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000018217	Pmp22	ENSMUST00000108701	ENSMUSP00000104341	TRANSLATION	protein_coding	-	CCDS24837.1	3	160	0	1.88	4.2	163.2	3	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000018217	Pmp22	ENSMUST00000018361	ENSMUSP00000018361	TRANSLATION	protein_coding	-	CCDS24837.1	1	160	0	1.88	4.2	163.2	3	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000018217	Pmp22	ENSMUST00000108702	ENSMUSP00000104342	TRANSLATION	protein_coding	-	CCDS24837.1	3	160	0	1.88	4.2	163.2	3	2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000041798	Gck	ENSMUST00000102920	ENSMUSP00000099984	TRANSLATION	protein_coding	-	CCDS24409.1	1	465	19	9.5	8.3	516.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041798	Gck	ENSMUST00000125434	ENSMUSP00000123016	TRANSLATION	protein_coding	start	-	2	97	0	1	0	23.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041798	Gck	ENSMUST00000109822	ENSMUSP00000105447	TRANSLATION	protein_coding	-	CCDS70135.1	1	465	19	9.3	3.9	516.6	0	-4,-5	-	-	18.789	MINOR
ENSMUSG00000041798	Gck	ENSMUST00000109823	ENSMUSP00000105448	TRANSLATION	protein_coding	-	CCDS70135.1	5	465	19	9.3	3.9	516.6	0	-4,-5	-	-	18.789	MINOR
ENSMUSG00000018474	Chd3	ENSMUST00000092971	ENSMUSP00000090649	TRANSLATION	protein_coding	-	-	5	2021	16	17.24	0.5	1104.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000018474	Chd3	ENSMUST00000108661	ENSMUSP00000104301	TRANSLATION	protein_coding	-	CCDS48825.2	5	2055	16	17.24	0.5	1104.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000018474	Chd3	ENSMUST00000122992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018474	Chd3	ENSMUST00000151436	ENSMUSP00000118172	TRANSLATION	protein_coding	start/stop	-	5	197	0	4.18	0	85.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018474	Chd3	ENSMUST00000144332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018474	Chd3	ENSMUST00000238797	ENSMUSP00000159107	TRANSLATION	protein_coding	start	-	-	385	0	0	0	216.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018474	Chd3	ENSMUST00000144701	ENSMUSP00000114520	TRANSLATION	protein_coding	start/stop	-	3	143	9	1.3	0	45.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018474	Chd3	ENSMUST00000135909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018474	Chd3	ENSMUST00000146930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018474	Chd3	ENSMUST00000128981	ENSMUSP00000122137	TRANSLATION	protein_coding	start/stop	-	5	1886	16	17.24	0	1104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018474	Chd3	ENSMUST00000154046	ENSMUSP00000121192	TRANSLATION	protein_coding	start/stop	-	2	151	9	1.3	0	45.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018379	Srsf1	ENSMUST00000079866	ENSMUSP00000133517	TRANSLATION	protein_coding	-	CCDS36274.1	1	201	0	4.58	1.7	115.4	0	-4,-5	-	-	10.131	MINOR
ENSMUSG00000018379	Srsf1	ENSMUST00000134824	ENSMUSP00000114549	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	2.83	0	54.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018379	Srsf1	ENSMUST00000107920	ENSMUSP00000103553	TRANSLATION	protein_coding	-	-	5	253	0	5.58	1.2	117	0	-4,-5	-	-	12.066	MINOR
ENSMUSG00000018379	Srsf1	ENSMUST00000171976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018379	Srsf1	ENSMUST00000139129	ENSMUSP00000120595	TRANSLATION	protein_coding	-	CCDS36273.1	1	248	0	5.58	10.3	117	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018379	Srsf1	ENSMUST00000172186	ENSMUSP00000128190	TRANSLATION	nonsense_mediated_decay	start	-	5	58	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018379	Srsf1	ENSMUST00000132983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048498	Cd300e	ENSMUST00000062787	ENSMUSP00000054883	TRANSLATION	protein_coding	-	CCDS25618.1	1	196	0	1	0.5	60.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020447	Npc1l1	ENSMUST00000004505	ENSMUSP00000004505	TRANSLATION	protein_coding	-	CCDS24413.1	1	1333	0	14.35	0.5	525	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020542	Myocd	ENSMUST00000101042	ENSMUSP00000098603	TRANSLATION	protein_coding	-	-	1	855	0	0.73	0	41.1	0	-4,-5	-	-	3.594	MINOR
ENSMUSG00000020542	Myocd	ENSMUST00000151483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020542	Myocd	ENSMUST00000102635	ENSMUSP00000099695	TRANSLATION	protein_coding	-	CCDS24843.1	1	935	0	3.73	0.5	68.6	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000020542	Myocd	ENSMUST00000150823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020542	Myocd	ENSMUST00000144399	ENSMUSP00000115572	TRANSLATION	protein_coding	start/stop	-	3	207	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020542	Myocd	ENSMUST00000108695	ENSMUSP00000104335	TRANSLATION	protein_coding	-	CCDS48819.1	1	983	0	3.73	0.5	68.6	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000020451	Limk2	ENSMUST00000148091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000147344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000132479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000123689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000145223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000101642	ENSMUSP00000099165	TRANSLATION	protein_coding	-	CCDS24359.1	1	617	20	12.3	9.5	297.7	0	-4,-6	-	-	19.23	ALTERNATIVE:1
ENSMUSG00000020451	Limk2	ENSMUST00000101638	ENSMUSP00000099162	TRANSLATION	protein_coding	-	CCDS24358.1	1	638	20	12.3	5.1	321.9	0	-4,-6	-	-	19.128	PRINCIPAL:4
ENSMUSG00000020451	Limk2	ENSMUST00000110029	ENSMUSP00000105656	TRANSLATION	protein_coding	-	CCDS24360.1	1	451	20	9.3	0.5	209.4	0	-4,-6	-	-	6	MINOR
ENSMUSG00000020451	Limk2	ENSMUST00000148771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000142926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000125832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000134576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020451	Limk2	ENSMUST00000101640	ENSMUSP00000099163	TRANSLATION	protein_coding	-	-	5	623	20	12.4584	0.5	297.6	0	-4,-6	-	-	16.542	MINOR
ENSMUSG00000042189	Tekt3	ENSMUST00000035732	ENSMUSP00000042063	TRANSLATION	protein_coding	-	CCDS24836.1	1	490	0	0	8.8	486.8	0	-2,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000020844	Nxn	ENSMUST00000131472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020844	Nxn	ENSMUST00000021204	ENSMUSP00000021204	TRANSLATION	protein_coding	-	CCDS25064.1	1	435	7	3	5.1	205.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000039055	Eme1	ENSMUST00000128643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039055	Eme1	ENSMUST00000039949	ENSMUSP00000036361	TRANSLATION	protein_coding	-	CCDS25262.1	1	570	0	7.15	1.5	65.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039055	Eme1	ENSMUST00000127158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039055	Eme1	ENSMUST00000128447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037124	Trim58	ENSMUST00000075084	ENSMUSP00000074594	TRANSLATION	protein_coding	-	CCDS24738.1	1	485	16	3.864	3.9	218.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000049491	Slc36a3	ENSMUST00000128244	ENSMUSP00000116073	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049491	Slc36a3	ENSMUST00000069816	ENSMUSP00000064960	TRANSLATION	protein_coding	-	-	1	102	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000049491	Slc36a3	ENSMUST00000020502	ENSMUSP00000020502	TRANSLATION	protein_coding	-	CCDS24708.1	1	477	0	0	1.5	215.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000047564	Krtap3-1	ENSMUST00000055502	ENSMUSP00000053940	TRANSLATION	protein_coding	-	CCDS48907.1	-	98	0	0	7.5	165.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000078651	Aoc2	ENSMUST00000041095	ENSMUSP00000040255	TRANSLATION	protein_coding	-	CCDS25464.1	1	757	18	4.75	4.1	521.2	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000078651	Aoc2	ENSMUST00000107264	ENSMUSP00000102885	TRANSLATION	protein_coding	-	-	5	730	18	4	2.4	414.7	0	1,-3	-	-	10.952	MINOR
ENSMUSG00000018372	Cep95	ENSMUST00000103068	ENSMUSP00000099357	TRANSLATION	protein_coding	-	CCDS48963.1	1	784	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000018372	Cep95	ENSMUST00000133581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018372	Cep95	ENSMUST00000131244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018372	Cep95	ENSMUST00000149279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018372	Cep95	ENSMUST00000130019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018372	Cep95	ENSMUST00000018516	ENSMUSP00000018516	TRANSLATION	protein_coding	-	CCDS25563.1	1	827	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000018372	Cep95	ENSMUST00000124898	ENSMUSP00000122454	TRANSLATION	protein_coding	start	-	3	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000107573	Olfr1389	ENSMUST00000203369	ENSMUSP00000145461	TRANSLATION	protein_coding	-	CCDS24608.1	-	311	0	0.16	6.3	167	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000107573	Olfr1389	ENSMUST00000217595	ENSMUSP00000149222	TRANSLATION	protein_coding	-	CCDS24608.1	5	311	0	0.16	6.3	167	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000107573	Olfr1389	ENSMUST00000216641	ENSMUSP00000149032	TRANSLATION	protein_coding	-	CCDS24608.1	5	311	0	0.16	6.3	167	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034586	Hid1	ENSMUST00000153447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034586	Hid1	ENSMUST00000130073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034586	Hid1	ENSMUST00000123428	ENSMUSP00000121914	TRANSLATION	protein_coding	start/stop	-	5	273	0	0	0	264.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034586	Hid1	ENSMUST00000145316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034586	Hid1	ENSMUST00000044152	ENSMUSP00000043789	TRANSLATION	protein_coding	-	CCDS83927.1	1	787	0	0	6.3	959.3	0	-4,-6	-	-	7.91	ALTERNATIVE:1
ENSMUSG00000034586	Hid1	ENSMUST00000146256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034586	Hid1	ENSMUST00000106542	ENSMUSP00000102152	TRANSLATION	protein_coding	-	CCDS25630.1	1	788	0	0	6.3	960.8	0	-4,-6	-	-	8	PRINCIPAL:3
ENSMUSG00000034586	Hid1	ENSMUST00000152977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000631	Myo18a	ENSMUST00000100795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000631	Myo18a	ENSMUST00000108376	ENSMUSP00000104013	TRANSLATION	protein_coding	-	-	5	1998	14	19.09	1.2	411.7	0	-4,-5	-	-	12.207	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000135045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000631	Myo18a	ENSMUST00000130627	ENSMUSP00000119839	TRANSLATION	protein_coding	-	-	5	2062	14	19.75	0.5	476.4	0	-4,-5	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000000631	Myo18a	ENSMUST00000000645	ENSMUSP00000000645	TRANSLATION	protein_coding	-	-	5	2036	14	19.45	0.5	472.5	0	-4,-5	-	-	16.506	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000100443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000631	Myo18a	ENSMUST00000108375	ENSMUSP00000104012	TRANSLATION	protein_coding	-	-	5	2050	14	19.45	3.9	476.4	0	-4,-5	-	-	17.74	ALTERNATIVE:2
ENSMUSG00000000631	Myo18a	ENSMUST00000167856	ENSMUSP00000128487	TRANSLATION	protein_coding	-	-	5	1642	14	17.37	0	401	0	-4,-6	-	-	8.058	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000151373	ENSMUSP00000123256	TRANSLATION	protein_coding	stop	-	5	307	6	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000164315	ENSMUSP00000129084	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000135375	ENSMUSP00000117044	TRANSLATION	protein_coding	start	-	5	501	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000130305	ENSMUSP00000119574	TRANSLATION	protein_coding	-	-	5	1716	14	19.75	0	440.2	0	-4,-5	-	-	15.168	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000102488	ENSMUSP00000099546	TRANSLATION	protein_coding	-	CCDS25085.1	5	2035	14	19.45	2.9	476.4	0	-4,-5	-	-	17.395	PRINCIPAL:3
ENSMUSG00000000631	Myo18a	ENSMUST00000154892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000631	Myo18a	ENSMUST00000168348	ENSMUSP00000130696	TRANSLATION	protein_coding	-	CCDS70253.1	1	2083	14	19.75	0.5	476.4	0	-4,-5	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000000631	Myo18a	ENSMUST00000134196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000631	Myo18a	ENSMUST00000092884	ENSMUSP00000090560	TRANSLATION	protein_coding	-	-	5	1704	14	19.45	0.5	440.2	0	-4,-5	-	-	14.568	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000092887	ENSMUSP00000090563	TRANSLATION	protein_coding	-	CCDS25085.1	1	2035	14	19.45	2.9	476.4	0	-4,-5	-	-	17.395	PRINCIPAL:3
ENSMUSG00000000631	Myo18a	ENSMUST00000130956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000631	Myo18a	ENSMUST00000142571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000631	Myo18a	ENSMUST00000100794	ENSMUSP00000098358	TRANSLATION	protein_coding	-	CCDS78997.1	1	1700	14	19.45	0.5	436.2	0	-4,-5	-	-	14.328	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000164334	ENSMUSP00000131771	TRANSLATION	protein_coding	-	-	5	1719	14	19.45	0.5	440.2	0	-4,-5	-	-	14.568	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000172303	ENSMUSP00000129098	TRANSLATION	protein_coding	-	CCDS83849.1	1	1722	14	20.08	0.5	437.1	0	-4,-5	-	-	15.642	MINOR
ENSMUSG00000000631	Myo18a	ENSMUST00000169105	ENSMUSP00000132149	TRANSLATION	protein_coding	-	CCDS70252.1	1	2047	14	19.75	2.9	476.4	0	-4,-5	-	-	17.995	ALTERNATIVE:2
ENSMUSG00000050567	Maml1	ENSMUST00000135868	ENSMUSP00000118188	TRANSLATION	protein_coding	start	-	1	585	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050567	Maml1	ENSMUST00000059458	ENSMUSP00000059210	TRANSLATION	protein_coding	-	CCDS24632.2	1	1020	0	1	1.5	92.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020611	Gna13	ENSMUST00000106702	ENSMUSP00000102313	TRANSLATION	protein_coding	-	-	1	173	8	2	2.5	101.6	0	-2,-5	-	-	3.452	MINOR
ENSMUSG00000020611	Gna13	ENSMUST00000020930	ENSMUSP00000020930	TRANSLATION	protein_coding	-	CCDS25577.1	1	377	23	3.5	14.3	362.7	0	-2,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000039096	Rsad1	ENSMUST00000143299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039096	Rsad1	ENSMUST00000132274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039096	Rsad1	ENSMUST00000040487	ENSMUSP00000037361	TRANSLATION	protein_coding	-	CCDS25258.1	1	442	10	1.68	1.5	95.2	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000039096	Rsad1	ENSMUST00000148888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047804	Akap10	ENSMUST00000143952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047804	Akap10	ENSMUST00000137323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047804	Akap10	ENSMUST00000108710	ENSMUSP00000104350	TRANSLATION	protein_coding	-	-	2	560	0	1.3	0	81.9	0	-4,-2	-	-	8.784	MINOR
ENSMUSG00000047804	Akap10	ENSMUST00000102650	ENSMUSP00000099710	TRANSLATION	protein_coding	-	CCDS24821.1	1	662	0	2.8	1.5	81.2	0	-4,-2	-	-	11.946	PRINCIPAL:1
ENSMUSG00000047804	Akap10	ENSMUST00000058173	ENSMUSP00000054418	TRANSLATION	protein_coding	-	-	2	505	0	1.3	0	81.9	0	-4,-6	-	-	8.784	MINOR
ENSMUSG00000025792	Slc25a10	ENSMUST00000026899	ENSMUSP00000026899	TRANSLATION	protein_coding	-	CCDS25738.1	1	287	0	5.66	10.5	183.2	0	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025792	Slc25a10	ENSMUST00000127349	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025792	Slc25a10	ENSMUST00000144706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025792	Slc25a10	ENSMUST00000152187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025792	Slc25a10	ENSMUST00000138874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025792	Slc25a10	ENSMUST00000123373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051455	Meioc	ENSMUST00000156590	ENSMUSP00000116246	TRANSLATION	protein_coding	stop	-	1	527	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051455	Meioc	ENSMUST00000155813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051455	Meioc	ENSMUST00000100378	ENSMUSP00000097947	TRANSLATION	protein_coding	-	CCDS48945.1	5	965	0	0	0.5	284.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033857	Engase	ENSMUST00000043447	ENSMUSP00000126050	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000166995	ENSMUSP00000127862	TRANSLATION	nonsense_mediated_decay	-	-	5	151	0	1.69	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000172279	ENSMUSP00000130097	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000171769	ENSMUSP00000132734	TRANSLATION	nonsense_mediated_decay	-	-	1	96	0	0.81	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000168689	ENSMUSP00000125886	TRANSLATION	protein_coding	start	-	5	373	0	1.812	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000135383	ENSMUSP00000117538	TRANSLATION	protein_coding	-	CCDS25704.1	1	734	0	6.932	1.5	331.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033857	Engase	ENSMUST00000139813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033857	Engase	ENSMUST00000139917	ENSMUSP00000129698	TRANSLATION	nonsense_mediated_decay	-	-	2	96	0	0.81	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033857	Engase	ENSMUST00000168785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048763	Hoxb3	ENSMUST00000143462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048763	Hoxb3	ENSMUST00000093944	ENSMUSP00000091476	TRANSLATION	protein_coding	-	CCDS25299.1	5	433	0	0.4	5.1	192.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048763	Hoxb3	ENSMUST00000055334	ENSMUSP00000053426	TRANSLATION	protein_coding	-	CCDS25299.1	1	433	0	0.4	5.1	192.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048763	Hoxb3	ENSMUST00000123091	ENSMUSP00000134435	TRANSLATION	protein_coding	stop	-	2	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040413	Timd2	ENSMUST00000125008	ENSMUSP00000123042	TRANSLATION	protein_coding	stop	-	2	92	0	1	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000040413	Timd2	ENSMUST00000109225	ENSMUSP00000104848	TRANSLATION	protein_coding	-	CCDS24582.1	1	305	0	2	0.5	39.8	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040413	Timd2	ENSMUST00000169584	ENSMUSP00000131540	TRANSLATION	protein_coding	-	CCDS24582.1	1	305	0	2	0.5	39.8	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040413	Timd2	ENSMUST00000055102	ENSMUSP00000060891	TRANSLATION	protein_coding	-	CCDS24582.1	1	305	0	2	0.5	39.8	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020755	Sap30bp	ENSMUST00000140991	ENSMUSP00000114844	TRANSLATION	protein_coding	-	CCDS25651.1	1	308	0	0	8.8	117	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020755	Sap30bp	ENSMUST00000021101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020755	Sap30bp	ENSMUST00000146209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020755	Sap30bp	ENSMUST00000131737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042377	Fam83g	ENSMUST00000093019	ENSMUSP00000090697	TRANSLATION	protein_coding	-	CCDS36175.1	1	812	0	2	0.5	392.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042377	Fam83g	ENSMUST00000070453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010803	Gabra1	ENSMUST00000205546	ENSMUSP00000146133	TRANSLATION	protein_coding	-	CCDS24553.1	5	455	5	6.61	14.8	282.3	3	2,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000010803	Gabra1	ENSMUST00000132971	ENSMUSP00000126611	TRANSLATION	protein_coding	stop	-	5	132	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010803	Gabra1	ENSMUST00000206105	ENSMUSP00000145949	TRANSLATION	protein_coding	stop	-	5	302	5	5.61	0	230.4	2	2,-1	-	-	-1	MINOR
ENSMUSG00000010803	Gabra1	ENSMUST00000153147	ENSMUSP00000129056	TRANSLATION	protein_coding	stop	-	5	91	0	1.68	0	29.9	0	2,-1	-	-	-1	MINOR
ENSMUSG00000010803	Gabra1	ENSMUST00000207274	ENSMUSP00000147186	TRANSLATION	protein_coding	stop	-	5	167	1	3.01	0	110.1	0	2,-1	-	-	-1	MINOR
ENSMUSG00000010803	Gabra1	ENSMUST00000206085	ENSMUSP00000146285	TRANSLATION	protein_coding	stop	-	5	114	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010803	Gabra1	ENSMUST00000169305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010803	Gabra1	ENSMUST00000020707	ENSMUSP00000020707	TRANSLATION	protein_coding	-	CCDS24553.1	1	455	5	6.61	14.8	282.3	3	2,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000078131	Krtap1-3	ENSMUST00000104930	ENSMUSP00000100535	TRANSLATION	protein_coding	-	CCDS36310.1	-	173	0	0	0.5	188.1	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037278	Tmem97	ENSMUST00000103242	ENSMUSP00000099532	TRANSLATION	protein_coding	-	CCDS25112.1	1	176	0	0	3.9	164.2	0	-3,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000020541	Tom1l1	ENSMUST00000147329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020541	Tom1l1	ENSMUST00000107869	ENSMUSP00000103501	TRANSLATION	protein_coding	-	-	1	398	0	5.814	0	149.8	0	-4,-5	-	-	9.084	MINOR
ENSMUSG00000020541	Tom1l1	ENSMUST00000127034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020541	Tom1l1	ENSMUST00000154599	ENSMUSP00000123329	TRANSLATION	protein_coding	stop	-	3	191	0	4.25	0	103	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020541	Tom1l1	ENSMUST00000107867	ENSMUSP00000103499	TRANSLATION	protein_coding	-	-	1	227	0	1.15	0	34.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020541	Tom1l1	ENSMUST00000107868	ENSMUSP00000103500	TRANSLATION	protein_coding	-	CCDS36280.1	1	397	0	4.564	1.5	94	0	-4,-5	-	-	3.234	MINOR
ENSMUSG00000020541	Tom1l1	ENSMUST00000131055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020541	Tom1l1	ENSMUST00000020849	ENSMUSP00000020849	TRANSLATION	protein_coding	-	-	1	474	0	6.814	1.5	165.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034394	Lif	ENSMUST00000040750	ENSMUSP00000036853	TRANSLATION	protein_coding	-	CCDS24384.1	1	158	0	1.75	1.5	221.5	0	-4,-6	-	-	9.834	MINOR
ENSMUSG00000034394	Lif	ENSMUST00000066283	ENSMUSP00000067066	TRANSLATION	protein_coding	-	CCDS24383.1	5	203	0	2.75	8.8	224.4	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000034394	Lif	ENSMUST00000154927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034031	Ccdc182	ENSMUST00000037268	ENSMUSP00000036503	TRANSLATION	protein_coding	-	CCDS48881.1	-	152	0	0	2.7	266	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020128	Vps54	ENSMUST00000132146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020128	Vps54	ENSMUST00000132017	ENSMUSP00000116739	TRANSLATION	protein_coding	start	-	5	815	0	4.55	0	203.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020128	Vps54	ENSMUST00000006221	ENSMUSP00000006221	TRANSLATION	protein_coding	-	CCDS24463.1	1	977	0	4.55	7.5	203.6	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000020128	Vps54	ENSMUST00000109578	ENSMUSP00000105206	TRANSLATION	protein_coding	-	CCDS70147.1	1	965	0	4.55	7.5	203.6	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000020128	Vps54	ENSMUST00000153411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020128	Vps54	ENSMUST00000153159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020128	Vps54	ENSMUST00000143932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006782	Cnp	ENSMUST00000150414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006782	Cnp	ENSMUST00000103120	ENSMUSP00000099409	TRANSLATION	protein_coding	-	CCDS25427.1	1	420	9	2.6	8.8	433.6	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000006782	Cnp	ENSMUST00000148034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006782	Cnp	ENSMUST00000147403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020354	Sgcd	ENSMUST00000109220	ENSMUSP00000104843	TRANSLATION	protein_coding	-	-	5	192	0	0	0.5	167.7	1	-4,-7	-	-	0.318	MINOR
ENSMUSG00000020354	Sgcd	ENSMUST00000077221	ENSMUSP00000076459	TRANSLATION	protein_coding	-	CCDS24584.1	1	289	0	0	17	262.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000020354	Sgcd	ENSMUST00000154578	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020354	Sgcd	ENSMUST00000128558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007777	0610009B22Rik	ENSMUST00000109098	ENSMUSP00000104726	TRANSLATION	protein_coding	-	CCDS36149.1	3	140	0	1	18.3	166.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000007777	0610009B22Rik	ENSMUST00000007921	ENSMUSP00000007921	TRANSLATION	protein_coding	-	CCDS36149.1	1	140	0	1	18.3	166.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000044966	Fbxo48	ENSMUST00000061327	ENSMUSP00000057901	TRANSLATION	protein_coding	-	CCDS24445.1	1	161	0	0.4	1.5	42	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044966	Fbxo48	ENSMUST00000109635	ENSMUSP00000105263	TRANSLATION	protein_coding	-	CCDS24445.1	1	161	0	0.4	1.5	42	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044177	Wfikkn2	ENSMUST00000131352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044177	Wfikkn2	ENSMUST00000061469	ENSMUSP00000053238	TRANSLATION	protein_coding	-	CCDS25251.1	1	571	0	0	1.5	250.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000076433	Cep295nl	ENSMUST00000103024	ENSMUSP00000099313	TRANSLATION	protein_coding	-	CCDS25700.1	1	533	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000076433	Cep295nl	ENSMUST00000168100	ENSMUSP00000128122	TRANSLATION	protein_coding	-	CCDS25700.1	-	533	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000035775	Krt20	ENSMUST00000017743	ENSMUSP00000017743	TRANSLATION	protein_coding	-	CCDS25381.1	1	431	0	4.115	2.7	326.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000038976	Ppp1r9b	ENSMUST00000151771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038976	Ppp1r9b	ENSMUST00000038696	ENSMUSP00000041732	TRANSLATION	protein_coding	-	CCDS25268.1	1	817	0	4.2	3.9	50.3	0	-4,-7	-	-	12.598	PRINCIPAL:2
ENSMUSG00000038976	Ppp1r9b	ENSMUST00000107748	ENSMUSP00000103377	TRANSLATION	protein_coding	-	-	1	393	0	4.4	0	50.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000017713	Tha1	ENSMUST00000033230	ENSMUSP00000033230	TRANSLATION	protein_coding	-	CCDS48993.1	1	400	13	5.15	0.5	297.8	0	-3,0	-	-	18	PRINCIPAL:1
ENSMUSG00000017713	Tha1	ENSMUST00000153989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017713	Tha1	ENSMUST00000138354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020718	Polg2	ENSMUST00000155107	ENSMUSP00000118975	TRANSLATION	nonsense_mediated_decay	-	-	1	126	0	1.132	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020718	Polg2	ENSMUST00000134029	ENSMUSP00000122755	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	1.132	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020718	Polg2	ENSMUST00000126201	ENSMUSP00000116583	TRANSLATION	nonsense_mediated_decay	-	-	5	162	0	1.32	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020718	Polg2	ENSMUST00000142590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020718	Polg2	ENSMUST00000021060	ENSMUSP00000021060	TRANSLATION	protein_coding	-	CCDS25561.1	1	459	0	9.41	1.5	38.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020718	Polg2	ENSMUST00000127061	ENSMUSP00000117441	TRANSLATION	nonsense_mediated_decay	-	-	1	170	0	2.1188	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078851	H2aw	ENSMUST00000108817	ENSMUSP00000104445	TRANSLATION	protein_coding	-	CCDS24755.1	-	130	0	1	8.8	136.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048807	Slc35e4	ENSMUST00000051207	ENSMUSP00000050978	TRANSLATION	protein_coding	-	CCDS24370.1	1	350	0	0	5.1	76.2	8	-4,-5	-	-	8	PRINCIPAL:2
ENSMUSG00000048807	Slc35e4	ENSMUST00000109995	ENSMUSP00000105622	TRANSLATION	protein_coding	-	-	5	351	0	0	5.1	74.9	8	-4,-5	-	-	7.898	ALTERNATIVE:1
ENSMUSG00000060630	Zfp735	ENSMUST00000145996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060630	Zfp735	ENSMUST00000149560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060630	Zfp735	ENSMUST00000080407	ENSMUSP00000079269	TRANSLATION	protein_coding	-	CCDS48845.1	1	734	34	1.4	0.5	260.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020264	Slc36a2	ENSMUST00000039305	ENSMUSP00000045613	TRANSLATION	protein_coding	-	CCDS24709.1	1	478	0	0	1.5	245.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020264	Slc36a2	ENSMUST00000125560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038188	Scarf1	ENSMUST00000118243	ENSMUSP00000114090	TRANSLATION	protein_coding	-	-	1	478	0	2.125	0	42.7	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000038188	Scarf1	ENSMUST00000123819	ENSMUSP00000120097	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000038188	Scarf1	ENSMUST00000042808	ENSMUSP00000044248	TRANSLATION	protein_coding	-	CCDS25050.1	1	820	0	2.125	0.5	42.7	2	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000020848	Doc2b	ENSMUST00000021209	ENSMUSP00000021209	TRANSLATION	protein_coding	-	CCDS25057.1	1	412	14	7.25	6.3	170.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000078607	1810010H24Rik	ENSMUST00000140447	ENSMUSP00000147434	TRANSLATION	protein_coding	-	-	5	305	0	0	1.5	0	0	0,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000078607	1810010H24Rik	ENSMUST00000106767	ENSMUSP00000148142	TRANSLATION	protein_coding	-	CCDS83916.1	2	112	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000078607	1810010H24Rik	ENSMUST00000239464	ENSMUSP00000159327	TRANSLATION	protein_coding	start	-	-	143	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000125	Wnt3	ENSMUST00000000127	ENSMUSP00000000127	TRANSLATION	protein_coding	-	CCDS25523.1	1	355	0	2.16	8.3	410	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000020142	Slc1a4	ENSMUST00000004634	ENSMUSP00000004634	TRANSLATION	protein_coding	-	-	1	452	13	6.28	0	381.7	9	2,-3	-	-	16.182	MINOR
ENSMUSG00000020142	Slc1a4	ENSMUST00000109594	ENSMUSP00000105223	TRANSLATION	protein_coding	-	CCDS24457.1	1	532	13	6.68	2.9	398.7	10	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049800	Sertad2	ENSMUST00000109586	ENSMUSP00000105215	TRANSLATION	protein_coding	-	CCDS24458.1	1	309	0	0	0.5	60.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049800	Sertad2	ENSMUST00000109585	ENSMUSP00000105214	TRANSLATION	protein_coding	-	CCDS24458.1	1	309	0	0	0.5	60.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049800	Sertad2	ENSMUST00000145328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049800	Sertad2	ENSMUST00000093292	ENSMUSP00000090981	TRANSLATION	protein_coding	-	CCDS24458.1	1	309	0	0	0.5	60.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090225	Gm11559	ENSMUST00000092694	ENSMUSP00000090367	TRANSLATION	protein_coding	-	CCDS48923.1	-	191	0	0	0.5	63.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000018845	Unc45b	ENSMUST00000125499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018845	Unc45b	ENSMUST00000108160	ENSMUSP00000103795	TRANSLATION	protein_coding	-	-	5	931	0	14.89	6.3	131.5	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000018845	Unc45b	ENSMUST00000018989	ENSMUSP00000018989	TRANSLATION	protein_coding	-	CCDS36251.1	1	929	0	14.89	6.3	131.5	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000018845	Unc45b	ENSMUST00000142336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018845	Unc45b	ENSMUST00000164945	ENSMUSP00000129405	TRANSLATION	protein_coding	-	-	5	931	0	14.89	6.3	131.5	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000003585	Sec14l2	ENSMUST00000133631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003585	Sec14l2	ENSMUST00000145173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003585	Sec14l2	ENSMUST00000132421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003585	Sec14l2	ENSMUST00000123901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003585	Sec14l2	ENSMUST00000136420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003585	Sec14l2	ENSMUST00000003681	ENSMUSP00000003681	TRANSLATION	protein_coding	-	CCDS24377.1	1	403	0	10	7.5	143.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000019590	Cyb561	ENSMUST00000143251	ENSMUSP00000121990	TRANSLATION	protein_coding	stop	-	3	209	0	3.028	0	139.9	9	-4,0	-	-	-1	MINOR
ENSMUSG00000019590	Cyb561	ENSMUST00000183493	ENSMUSP00000139125	TRANSLATION	protein_coding	start	-	5	106	0	1.28	0	53.8	5	1,-3	-	-	-1	MINOR
ENSMUSG00000019590	Cyb561	ENSMUST00000146607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019590	Cyb561	ENSMUST00000184086	ENSMUSP00000138931	TRANSLATION	protein_coding	-	-	5	192	0	2.228	0.5	101.4	7	-4,-5	-	-	5.454	MINOR
ENSMUSG00000019590	Cyb561	ENSMUST00000150563	ENSMUSP00000138838	TRANSLATION	protein_coding	stop	-	3	99	0	1.28	0	49.6	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000019590	Cyb561	ENSMUST00000184269	ENSMUSP00000138889	TRANSLATION	protein_coding	stop	-	5	181	0	2.03	0	90	7	-4,-2	-	-	-1	MINOR
ENSMUSG00000019590	Cyb561	ENSMUST00000019734	ENSMUSP00000019734	TRANSLATION	protein_coding	-	CCDS25542.1	1	250	0	3.9366	1.5	153.5	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000013653	1810065E05Rik	ENSMUST00000013797	ENSMUSP00000013797	TRANSLATION	protein_coding	-	CCDS24730.1	1	235	0	0	0.5	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000045176	Borcs6	ENSMUST00000051888	ENSMUSP00000059143	TRANSLATION	protein_coding	-	CCDS36190.1	-	360	0	0	1.5	168.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046474	Krtap4-16	ENSMUST00000107437	ENSMUSP00000103060	TRANSLATION	protein_coding	-	CCDS36326.1	-	202	0	0	0.5	102	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020424	Castor1	ENSMUST00000020699	ENSMUSP00000020699	TRANSLATION	protein_coding	-	CCDS24381.1	1	331	0	8.25	6.3	121.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000056564	Olfr324	ENSMUST00000216965	ENSMUSP00000154149	TRANSLATION	protein_coding	-	-	5	331	0	0.486	0.5	159.9	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000056564	Olfr324	ENSMUST00000214990	ENSMUSP00000154189	TRANSLATION	protein_coding	-	-	5	325	0	0.42	0	159.9	6	-4,-7	-	-	11.184	ALTERNATIVE:2
ENSMUSG00000056564	Olfr324	ENSMUST00000054683	ENSMUSP00000056457	TRANSLATION	protein_coding	-	CCDS24735.1	-	333	0	0.42	0.5	159.9	6	-4,-7	-	-	11.184	PRINCIPAL:2
ENSMUSG00000020402	Vdac1	ENSMUST00000125694	ENSMUSP00000116919	TRANSLATION	nonsense_mediated_decay	-	-	5	254	0	4.75	0	231.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020402	Vdac1	ENSMUST00000102758	ENSMUSP00000099819	TRANSLATION	protein_coding	-	CCDS24671.1	1	283	0	6.25	21.5	279.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020402	Vdac1	ENSMUST00000157052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020402	Vdac1	ENSMUST00000020673	ENSMUSP00000020673	TRANSLATION	protein_coding	-	-	5	296	0	6.25	0	279.8	0	2,-2	-	-	12	MINOR
ENSMUSG00000020402	Vdac1	ENSMUST00000153339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018924	Alox15	ENSMUST00000019068	ENSMUSP00000019068	TRANSLATION	protein_coding	-	CCDS24944.1	1	663	4	13.5	1.5	82.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000018924	Alox15	ENSMUST00000130000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018347	Zkscan6	ENSMUST00000018491	ENSMUSP00000018491	TRANSLATION	protein_coding	-	CCDS24845.1	1	556	20	1.8	1.5	259	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000018347	Zkscan6	ENSMUST00000071465	ENSMUSP00000071406	TRANSLATION	protein_coding	-	CCDS24845.1	1	556	20	1.8	1.5	259	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000107417	Olfr1383	ENSMUST00000204706	ENSMUSP00000145258	TRANSLATION	protein_coding	-	CCDS24614.1	3	311	0	0.2	2.7	151.1	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000107417	Olfr1383	ENSMUST00000077143	ENSMUSP00000076390	TRANSLATION	protein_coding	-	CCDS24614.1	-	311	0	0.2	2.7	151.1	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020522	Mfap3	ENSMUST00000108848	ENSMUSP00000104476	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000020522	Mfap3	ENSMUST00000108849	ENSMUSP00000104477	TRANSLATION	protein_coding	-	CCDS24718.1	1	349	0	0	1.5	30.5	1	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000020522	Mfap3	ENSMUST00000128971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020522	Mfap3	ENSMUST00000020830	ENSMUSP00000020830	TRANSLATION	protein_coding	-	CCDS24718.1	1	349	0	0	1.5	30.5	1	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000034685	Fam171a2	ENSMUST00000145190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034685	Fam171a2	ENSMUST00000152015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034685	Fam171a2	ENSMUST00000049057	ENSMUSP00000038486	TRANSLATION	protein_coding	-	CCDS36344.1	1	822	0	0	1.5	1046	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048721	Fndc9	ENSMUST00000060185	ENSMUSP00000060509	TRANSLATION	protein_coding	-	CCDS24574.1	1	226	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000070334	Krtap31-1	ENSMUST00000093935	ENSMUSP00000091467	TRANSLATION	protein_coding	-	CCDS25400.1	-	177	0	0	0.5	50.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000057534	Elobl	ENSMUST00000061938	ENSMUSP00000103534	TRANSLATION	protein_coding	-	-	1	161	0	1.2	0	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057534	Elobl	ENSMUST00000121228	ENSMUSP00000113104	TRANSLATION	protein_coding	-	-	2	161	0	1.2	0	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057534	Elobl	ENSMUST00000082339	ENSMUSP00000080951	TRANSLATION	protein_coding	start/stop	-	-	100	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038994	Hils1	ENSMUST00000038928	ENSMUSP00000039866	TRANSLATION	protein_coding	-	CCDS25267.1	-	170	0	0	0.5	35.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019368	Sec14l4	ENSMUST00000125351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000131171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000129689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000019512	ENSMUSP00000019512	TRANSLATION	protein_coding	-	CCDS24374.1	1	403	0	10	4.1	135.6	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000019368	Sec14l4	ENSMUST00000136222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000134482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000137324	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019368	Sec14l4	ENSMUST00000126423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020311	Erlec1	ENSMUST00000152770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020311	Erlec1	ENSMUST00000143126	ENSMUSP00000126490	TRANSLATION	nonsense_mediated_decay	start	-	5	80	2	0.75	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020311	Erlec1	ENSMUST00000155304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020311	Erlec1	ENSMUST00000129593	ENSMUSP00000129078	TRANSLATION	nonsense_mediated_decay	start	-	5	238	2	1.11	0	75.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020311	Erlec1	ENSMUST00000073192	ENSMUSP00000072929	TRANSLATION	protein_coding	-	CCDS24509.1	1	483	8	2.01	5.3	157.5	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000041278	Ttc1	ENSMUST00000147984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041278	Ttc1	ENSMUST00000048578	ENSMUSP00000040779	TRANSLATION	protein_coding	-	CCDS24561.1	1	292	0	3.83	1.5	13.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000041278	Ttc1	ENSMUST00000109278	ENSMUSP00000104901	TRANSLATION	protein_coding	-	-	5	250	0	3.55	0	13.1	0	-4,-5	-	-	11.442	ALTERNATIVE:2
ENSMUSG00000108265	Olfr318	ENSMUST00000214728	ENSMUSP00000149053	TRANSLATION	protein_coding	-	CCDS24741.1	5	306	0	0.42	1.5	159	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000108265	Olfr318	ENSMUST00000213944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108265	Olfr318	ENSMUST00000189911	ENSMUSP00000139574	TRANSLATION	protein_coding	-	CCDS24741.1	-	306	0	0.42	1.5	159	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000018507	Trpv2	ENSMUST00000018651	ENSMUSP00000018651	TRANSLATION	protein_coding	-	CCDS24827.1	2	756	7	12.7	0.5	103.9	5	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018507	Trpv2	ENSMUST00000102643	ENSMUSP00000099703	TRANSLATION	protein_coding	-	CCDS24827.1	5	756	7	12.7	0.5	103.9	5	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018507	Trpv2	ENSMUST00000130569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018507	Trpv2	ENSMUST00000153486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018507	Trpv2	ENSMUST00000151195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046010	Zfp830	ENSMUST00000056677	ENSMUSP00000056154	TRANSLATION	protein_coding	-	CCDS25146.1	-	363	4	0	0.5	0	0	-4,-2	-	-	4	PRINCIPAL:1
ENSMUSG00000032892	Rangrf	ENSMUST00000132093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000150017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000144271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000138362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000038644	ENSMUSP00000038485	TRANSLATION	protein_coding	-	CCDS24875.1	1	185	0	1.8	6.3	131.2	0	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000032892	Rangrf	ENSMUST00000143444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000133099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032892	Rangrf	ENSMUST00000156178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049680	Urgcp	ENSMUST00000118076	ENSMUSP00000113589	TRANSLATION	protein_coding	-	CCDS36105.1	1	883	10	0	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049680	Urgcp	ENSMUST00000053427	ENSMUSP00000055821	TRANSLATION	protein_coding	-	CCDS36105.1	5	883	10	0	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049680	Urgcp	ENSMUST00000140922	ENSMUSP00000120902	TRANSLATION	protein_coding	stop	-	2	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049680	Urgcp	ENSMUST00000120306	ENSMUSP00000113060	TRANSLATION	protein_coding	-	CCDS36105.1	1	883	10	0	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049680	Urgcp	ENSMUST00000093362	ENSMUSP00000091053	TRANSLATION	protein_coding	-	CCDS36104.1	1	926	10	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000049680	Urgcp	ENSMUST00000170116	ENSMUSP00000133216	TRANSLATION	protein_coding	-	CCDS36105.1	5	883	10	0	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000052949	Rnf157	ENSMUST00000148763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000129202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000142758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000137264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000141229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000100202	ENSMUSP00000097776	TRANSLATION	protein_coding	-	CCDS48984.1	1	681	8	0.64	2.9	51.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000052949	Rnf157	ENSMUST00000149682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052949	Rnf157	ENSMUST00000150775	ENSMUSP00000123289	TRANSLATION	protein_coding	start	-	3	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052949	Rnf157	ENSMUST00000149147	ENSMUSP00000122483	TRANSLATION	protein_coding	start	-	1	506	8	0.64	0	51.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052949	Rnf157	ENSMUST00000106398	ENSMUSP00000102006	TRANSLATION	protein_coding	-	-	5	659	8	0.64	1.2	51.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052949	Rnf157	ENSMUST00000137083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069830	Nlrp1a	ENSMUST00000048514	ENSMUSP00000038186	TRANSLATION	protein_coding	-	-	1	1300	7	4.812	0	554.8	0	-4,-5	-	-	17.862	ALTERNATIVE:2
ENSMUSG00000069830	Nlrp1a	ENSMUST00000108518	ENSMUSP00000104158	TRANSLATION	protein_coding	-	CCDS48838.1	5	1182	7	4.31	0.5	557.1	0	-4,-5	-	-	16.998	PRINCIPAL:2
ENSMUSG00000078640	Gm11627	ENSMUST00000139829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078640	Gm11627	ENSMUST00000107081	ENSMUSP00000102696	TRANSLATION	protein_coding	-	-	2	55	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000078640	Gm11627	ENSMUST00000107080	ENSMUSP00000102695	TRANSLATION	protein_coding	-	-	1	55	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000018736	Ndel1	ENSMUST00000144300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018736	Ndel1	ENSMUST00000108672	ENSMUSP00000104312	TRANSLATION	protein_coding	-	-	1	315	0	4.35	5.4	157.9	0	-4,-5	-	-	13.692	MINOR
ENSMUSG00000018736	Ndel1	ENSMUST00000101017	ENSMUSP00000098579	TRANSLATION	protein_coding	-	-	1	315	0	4.35	5.4	157.9	0	-4,-5	-	-	13.692	MINOR
ENSMUSG00000018736	Ndel1	ENSMUST00000018880	ENSMUSP00000018880	TRANSLATION	protein_coding	-	CCDS24870.1	1	345	0	4.35	8.8	157.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018736	Ndel1	ENSMUST00000127469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018736	Ndel1	ENSMUST00000143899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020694	Tlk2	ENSMUST00000126175	ENSMUSP00000120944	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020694	Tlk2	ENSMUST00000152404	ENSMUSP00000123179	TRANSLATION	protein_coding	start/stop	-	5	234	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020694	Tlk2	ENSMUST00000123050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020694	Tlk2	ENSMUST00000149459	ENSMUSP00000121897	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020694	Tlk2	ENSMUST00000092537	ENSMUSP00000090198	TRANSLATION	protein_coding	-	CCDS79062.1	1	697	19	4.85	0.5	175	0	-4,-5	-	-	14.928	MINOR
ENSMUSG00000020694	Tlk2	ENSMUST00000015107	ENSMUSP00000015107	TRANSLATION	protein_coding	-	CCDS36356.2	5	718	19	5.31	6.3	210.9	0	-4,-5	-	-	20.037	PRINCIPAL:3
ENSMUSG00000020694	Tlk2	ENSMUST00000106939	ENSMUSP00000102552	TRANSLATION	protein_coding	-	CCDS36356.2	1	718	19	5.31	6.3	210.9	0	-4,-5	-	-	20.037	PRINCIPAL:3
ENSMUSG00000020694	Tlk2	ENSMUST00000145048	ENSMUSP00000118520	TRANSLATION	protein_coding	-	CCDS79063.1	1	633	19	4.85	0.5	175	0	-4,-5	-	-	14.928	MINOR
ENSMUSG00000020694	Tlk2	ENSMUST00000146910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020694	Tlk2	ENSMUST00000126054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020694	Tlk2	ENSMUST00000106941	ENSMUSP00000102554	TRANSLATION	protein_coding	-	CCDS48954.1	1	750	19	5.31	8.8	210.9	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020694	Tlk2	ENSMUST00000134419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048834	Vstm2a	ENSMUST00000208440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048834	Vstm2a	ENSMUST00000208926	ENSMUSP00000146349	TRANSLATION	protein_coding	start	-	5	234	0	0	0	38.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048834	Vstm2a	ENSMUST00000109645	ENSMUSP00000105272	TRANSLATION	protein_coding	-	CCDS24441.2	1	236	0	0	13.5	38.6	0	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000048834	Vstm2a	ENSMUST00000109647	ENSMUSP00000105274	TRANSLATION	protein_coding	-	-	1	282	0	0	0	38.6	0	0,-4	-	-	6	MINOR
ENSMUSG00000048834	Vstm2a	ENSMUST00000207256	ENSMUSP00000147108	TRANSLATION	protein_coding	start	-	1	26	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017776	Crk	ENSMUST00000108425	ENSMUSP00000104063	TRANSLATION	protein_coding	-	CCDS70241.1	1	204	0	3	7.5	124.8	0	-4,-6	-	-	8.616	MINOR
ENSMUSG00000017776	Crk	ENSMUST00000093115	ENSMUSP00000090803	TRANSLATION	protein_coding	-	-	1	261	0	3	0.5	124.8	0	-4,-6	-	-	5.616	MINOR
ENSMUSG00000017776	Crk	ENSMUST00000108426	ENSMUSP00000104064	TRANSLATION	protein_coding	-	CCDS70242.1	3	82	0	2	0.5	65.7	0	-4,-6	-	-	0.072	MINOR
ENSMUSG00000017776	Crk	ENSMUST00000017920	ENSMUSP00000017920	TRANSLATION	protein_coding	-	CCDS25055.1	1	304	0	5	7.5	164.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000017776	Crk	ENSMUST00000147718	ENSMUSP00000116527	TRANSLATION	protein_coding	start	-	3	224	0	3	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047821	Trim16	ENSMUST00000055006	ENSMUSP00000055542	TRANSLATION	protein_coding	-	CCDS24832.1	1	556	13	3.36	1.5	139	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047821	Trim16	ENSMUST00000128623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047821	Trim16	ENSMUST00000147942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047821	Trim16	ENSMUST00000108703	ENSMUSP00000104343	TRANSLATION	protein_coding	-	-	1	469	9	3.04	0.5	139	0	-4,-5	-	-	14.694	MINOR
ENSMUSG00000047821	Trim16	ENSMUST00000072639	ENSMUSP00000072432	TRANSLATION	protein_coding	-	-	2	488	13	2.626	0	97.2	0	-4,-5	-	-	14.022	MINOR
ENSMUSG00000005917	Otx1	ENSMUST00000172395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005917	Otx1	ENSMUST00000006071	ENSMUSP00000006071	TRANSLATION	protein_coding	-	CCDS24468.1	1	355	0	1.7	6.3	202.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000005917	Otx1	ENSMUST00000147486	ENSMUSP00000134704	TRANSLATION	protein_coding	stop	-	5	150	0	1.7	0	78.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020526	Znhit3	ENSMUST00000136656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020526	Znhit3	ENSMUST00000156046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020526	Znhit3	ENSMUST00000127838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020526	Znhit3	ENSMUST00000144552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020526	Znhit3	ENSMUST00000103195	ENSMUSP00000099484	TRANSLATION	protein_coding	-	CCDS25189.1	1	151	8	2.98	2.9	37.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020456	Ogdh	ENSMUST00000101554	ENSMUSP00000099090	TRANSLATION	protein_coding	-	CCDS36106.1	1	1023	20	14.862	8.3	813.6	0	-4,0	-	-	20.478	PRINCIPAL:3
ENSMUSG00000020456	Ogdh	ENSMUST00000140765	ENSMUSP00000117323	TRANSLATION	protein_coding	stop	-	2	123	0	0.732	0	69.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020456	Ogdh	ENSMUST00000135124	ENSMUSP00000117505	TRANSLATION	protein_coding	stop	-	3	84	0	0.2	0	69.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020456	Ogdh	ENSMUST00000003461	ENSMUSP00000003461	TRANSLATION	protein_coding	-	CCDS36106.1	1	1023	20	14.862	8.3	813.6	0	-4,0	-	-	20.478	PRINCIPAL:3
ENSMUSG00000020456	Ogdh	ENSMUST00000081894	ENSMUSP00000080569	TRANSLATION	protein_coding	-	CCDS56759.1	1	1019	20	15.122	7.1	813.6	0	-4,0	-	-	20.508	ALTERNATIVE:1
ENSMUSG00000020456	Ogdh	ENSMUST00000093350	ENSMUSP00000091041	TRANSLATION	protein_coding	-	CCDS56758.1	1	1034	20	14.872	7.1	813.6	0	-4,0	-	-	20.01	ALTERNATIVE:1
ENSMUSG00000020456	Ogdh	ENSMUST00000125929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020461	Clhc1	ENSMUST00000020753	ENSMUSP00000020753	TRANSLATION	protein_coding	-	CCDS48763.1	1	596	0	1.66	1.5	81.4	0	-4,-5	-	-	10.914	MINOR
ENSMUSG00000020461	Clhc1	ENSMUST00000123175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020461	Clhc1	ENSMUST00000208530	ENSMUSP00000147007	TRANSLATION	protein_coding	-	CCDS83787.1	1	585	0	1.66	1.5	99.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020461	Clhc1	ENSMUST00000131366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038020	Rapgefl1	ENSMUST00000139889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038020	Rapgefl1	ENSMUST00000107479	ENSMUSP00000103103	TRANSLATION	protein_coding	-	CCDS36303.1	5	662	0	10.4	1.5	155.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038020	Rapgefl1	ENSMUST00000037640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056598	Drc3	ENSMUST00000108722	ENSMUSP00000104362	TRANSLATION	protein_coding	-	-	5	523	0	3.32	2.7	29.6	0	-4,-5	-	-	11.874	ALTERNATIVE:2
ENSMUSG00000056598	Drc3	ENSMUST00000070805	ENSMUSP00000065525	TRANSLATION	protein_coding	-	-	1	208	0	3.384	0	29.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000056598	Drc3	ENSMUST00000108723	ENSMUSP00000104363	TRANSLATION	protein_coding	-	CCDS36172.1	1	523	0	3.32	2.7	29.6	0	-4,-5	-	-	11.874	PRINCIPAL:2
ENSMUSG00000056598	Drc3	ENSMUST00000128905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056598	Drc3	ENSMUST00000094140	ENSMUSP00000091691	TRANSLATION	protein_coding	-	-	1	278	0	3.32	0	29.6	0	-4,-5	-	-	11.874	ALTERNATIVE:2
ENSMUSG00000020935	Dcakd	ENSMUST00000152965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020935	Dcakd	ENSMUST00000155490	ENSMUSP00000118827	TRANSLATION	protein_coding	stop	-	3	105	7	1.8	0	125.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020935	Dcakd	ENSMUST00000021313	ENSMUSP00000021313	TRANSLATION	protein_coding	-	CCDS25510.1	1	231	7	2.88	4.2	206.7	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000020935	Dcakd	ENSMUST00000134335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020935	Dcakd	ENSMUST00000126365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039238	Zfp750	ENSMUST00000092298	ENSMUSP00000089951	TRANSLATION	protein_coding	-	CCDS25779.1	1	703	3	0	0.5	122.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000018800	Abca5	ENSMUST00000148984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018800	Abca5	ENSMUST00000043961	ENSMUSP00000047927	TRANSLATION	protein_coding	-	CCDS25591.1	1	1642	27	11.25	3.9	299.3	19	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000018800	Abca5	ENSMUST00000134721	ENSMUSP00000118328	TRANSLATION	protein_coding	stop	-	5	181	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000018800	Abca5	ENSMUST00000124714	ENSMUSP00000120708	TRANSLATION	protein_coding	stop	-	1	1194	17	5.14	0	208	18	-4,-2	-	-	-1	MINOR
ENSMUSG00000018800	Abca5	ENSMUST00000127318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069717	Gm11568	ENSMUST00000107434	ENSMUSP00000103057	TRANSLATION	protein_coding	-	CCDS56803.1	-	211	0	0	0.5	44.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000059995	Atxn7l3	ENSMUST00000073234	ENSMUSP00000072967	TRANSLATION	protein_coding	-	CCDS48941.1	1	347	9	3	7.5	93.6	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000059995	Atxn7l3	ENSMUST00000137387	ENSMUSP00000122610	TRANSLATION	protein_coding	start	-	5	350	9	3	0	93.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059995	Atxn7l3	ENSMUST00000141516	ENSMUSP00000121917	TRANSLATION	protein_coding	start	-	5	258	5	3	0	29.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059995	Atxn7l3	ENSMUST00000107134	ENSMUSP00000102752	TRANSLATION	protein_coding	-	CCDS48941.1	5	347	9	3	7.5	93.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000059995	Atxn7l3	ENSMUST00000145484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059995	Atxn7l3	ENSMUST00000107132	ENSMUSP00000102750	TRANSLATION	protein_coding	-	CCDS48942.1	5	354	9	3	7.5	93.6	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020891	Alox8	ENSMUST00000094078	ENSMUSP00000091621	TRANSLATION	protein_coding	-	-	5	648	5	12.75	0	82.4	0	-4,-6	-	-	15.5	MINOR
ENSMUSG00000020891	Alox8	ENSMUST00000021262	ENSMUSP00000021262	TRANSLATION	protein_coding	-	CCDS24886.1	1	677	5	13.5	1.5	82.4	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000020891	Alox8	ENSMUST00000144787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020891	Alox8	ENSMUST00000156157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048981	Krt31	ENSMUST00000007318	ENSMUSP00000007318	TRANSLATION	protein_coding	-	CCDS25405.1	1	416	0	3.76	7.6	366.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000109833	Gm40193	ENSMUST00000209971	ENSMUSP00000148188	TRANSLATION	protein_coding	-	-	5	78	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000004748	Mtfp1	ENSMUST00000123607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004748	Mtfp1	ENSMUST00000004868	ENSMUSP00000004868	TRANSLATION	protein_coding	-	CCDS24376.1	1	166	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000025170	Rab40b	ENSMUST00000149948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025170	Rab40b	ENSMUST00000124639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025170	Rab40b	ENSMUST00000106107	ENSMUSP00000101713	TRANSLATION	protein_coding	-	CCDS25774.2	1	279	14	3.85	8.1	166.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000025170	Rab40b	ENSMUST00000135290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020682	Mmp28	ENSMUST00000021020	ENSMUSP00000021020	TRANSLATION	protein_coding	-	CCDS25166.1	1	510	19	3.74	0.5	248.7	0	3,-1	-	-	15.768	MINOR
ENSMUSG00000020682	Mmp28	ENSMUST00000103209	ENSMUSP00000099498	TRANSLATION	protein_coding	-	CCDS25167.1	1	496	19	3.44	0.5	248.7	0	3,-1	-	-	15.168	MINOR
ENSMUSG00000020682	Mmp28	ENSMUST00000119346	ENSMUSP00000112566	TRANSLATION	protein_coding	-	-	1	407	18	3.584	0	224.5	0	3,-1	-	-	13.338	MINOR
ENSMUSG00000020682	Mmp28	ENSMUST00000108137	ENSMUSP00000103772	TRANSLATION	protein_coding	-	CCDS83860.1	1	520	19	4.004	4.1	277.1	0	3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000020682	Mmp28	ENSMUST00000138780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039976	Tbc1d16	ENSMUST00000207655	ENSMUSP00000147182	TRANSLATION	protein_coding	-	CCDS83940.1	1	765	0	4.2	3.9	157.7	0	-4,-2	-	-	13	ALTERNATIVE:2
ENSMUSG00000039976	Tbc1d16	ENSMUST00000125856	ENSMUSP00000119431	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039976	Tbc1d16	ENSMUST00000036113	ENSMUSP00000048516	TRANSLATION	protein_coding	-	CCDS25711.1	1	766	0	4.2	3.9	157.7	0	-4,-2	-	-	13	PRINCIPAL:3
ENSMUSG00000019312	Grb7	ENSMUST00000156328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019312	Grb7	ENSMUST00000132771	ENSMUSP00000119926	TRANSLATION	protein_coding	stop	-	3	138	0	1	0	21.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019312	Grb7	ENSMUST00000127914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019312	Grb7	ENSMUST00000019456	ENSMUSP00000019456	TRANSLATION	protein_coding	-	CCDS25351.1	1	535	0	10.63	1.5	247.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019312	Grb7	ENSMUST00000129034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019312	Grb7	ENSMUST00000133419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020890	Gucy2e	ENSMUST00000108664	ENSMUSP00000104304	TRANSLATION	protein_coding	-	CCDS24887.1	5	1108	0	6.645	1.5	479.9	1	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000020890	Gucy2e	ENSMUST00000108665	ENSMUSP00000104305	TRANSLATION	protein_coding	-	CCDS24887.1	5	1108	0	6.645	1.5	479.9	1	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000020890	Gucy2e	ENSMUST00000021259	ENSMUSP00000021259	TRANSLATION	protein_coding	-	CCDS24887.1	5	1108	0	6.645	1.5	479.9	1	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000020890	Gucy2e	ENSMUST00000155457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000567	Sox9	ENSMUST00000000579	ENSMUSP00000000579	TRANSLATION	protein_coding	-	CCDS25595.1	1	507	0	1.8	1.5	179.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025140	Pycr1	ENSMUST00000139706	ENSMUSP00000117737	TRANSLATION	protein_coding	stop	-	3	158	22	3.58	0	81.8	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000025140	Pycr1	ENSMUST00000151876	ENSMUSP00000120558	TRANSLATION	protein_coding	stop	-	5	164	16	3.75	0	76.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025140	Pycr1	ENSMUST00000170556	ENSMUSP00000131199	TRANSLATION	protein_coding	-	CCDS25749.1	1	309	22	7.83	1.5	210.1	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000025140	Pycr1	ENSMUST00000141254	ENSMUSP00000114863	TRANSLATION	protein_coding	stop	-	5	238	22	6.08	0	174.6	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000025140	Pycr1	ENSMUST00000133908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025140	Pycr1	ENSMUST00000026133	ENSMUSP00000026133	TRANSLATION	protein_coding	-	CCDS25749.1	1	309	22	7.83	1.5	210.1	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000047702	Olfr1388	ENSMUST00000215226	ENSMUSP00000150160	TRANSLATION	protein_coding	-	CCDS24609.1	5	311	0	0	6.3	156.2	6	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000047702	Olfr1388	ENSMUST00000055584	ENSMUSP00000053834	TRANSLATION	protein_coding	-	CCDS24609.1	-	311	0	0	6.3	156.2	6	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000034768	Asb16	ENSMUST00000036467	ENSMUSP00000038450	TRANSLATION	protein_coding	-	CCDS25493.1	1	453	0	1.44	6.3	123.3	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000057050	Olfr397	ENSMUST00000215020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057050	Olfr397	ENSMUST00000213134	ENSMUSP00000150369	TRANSLATION	protein_coding	-	CCDS25021.1	5	315	0	0.42	2.7	201.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057050	Olfr397	ENSMUST00000121280	ENSMUSP00000113870	TRANSLATION	protein_coding	-	CCDS25021.1	-	315	0	0.42	2.7	201.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057050	Olfr397	ENSMUST00000216291	ENSMUSP00000150172	TRANSLATION	protein_coding	-	CCDS25021.1	5	315	0	0.42	2.7	201.1	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000018697	Aatf	ENSMUST00000141093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018697	Aatf	ENSMUST00000127042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018697	Aatf	ENSMUST00000148434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018697	Aatf	ENSMUST00000018841	ENSMUSP00000018841	TRANSLATION	protein_coding	-	CCDS25186.1	1	526	0	0	1.5	230.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000089753	Cd300ld2	ENSMUST00000092463	ENSMUSP00000090120	TRANSLATION	protein_coding	stop	-	5	127	0	1	0	55.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000089753	Cd300ld2	ENSMUST00000106578	ENSMUSP00000102188	TRANSLATION	protein_coding	-	-	5	305	0	1	0	55.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020752	Recql5	ENSMUST00000021097	ENSMUSP00000021097	TRANSLATION	protein_coding	-	CCDS25650.1	1	982	19	14.25	0.5	477.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020752	Recql5	ENSMUST00000144824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020752	Recql5	ENSMUST00000156776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020752	Recql5	ENSMUST00000134208	ENSMUSP00000137157	TRANSLATION	nonsense_mediated_decay	-	-	1	305	15	7.098	0	83.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020752	Recql5	ENSMUST00000131578	ENSMUSP00000136178	TRANSLATION	nonsense_mediated_decay	start	-	5	220	4	3.7	0	42.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020752	Recql5	ENSMUST00000136774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020752	Recql5	ENSMUST00000140174	ENSMUSP00000136506	TRANSLATION	nonsense_mediated_decay	-	-	1	294	14	4	0	74.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020752	Recql5	ENSMUST00000147172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017165	Gast	ENSMUST00000017309	ENSMUSP00000017309	TRANSLATION	protein_coding	-	CCDS25418.1	1	101	0	0	1.5	26.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000034621	Gpatch8	ENSMUST00000127018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034621	Gpatch8	ENSMUST00000125754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034621	Gpatch8	ENSMUST00000069673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034621	Gpatch8	ENSMUST00000143842	ENSMUSP00000120649	TRANSLATION	protein_coding	-	CCDS48944.1	5	1505	3	0	0.5	76.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034621	Gpatch8	ENSMUST00000126804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034621	Gpatch8	ENSMUST00000131573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044296	Zfp879	ENSMUST00000049625	ENSMUSP00000061782	TRANSLATION	protein_coding	-	CCDS24638.1	1	563	52	1.6	0.5	368.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044296	Zfp879	ENSMUST00000109133	ENSMUSP00000104761	TRANSLATION	protein_coding	-	CCDS70178.1	5	490	52	0.6	0.5	280.3	0	-4,-5	-	-	8.958	MINOR
ENSMUSG00000044296	Zfp879	ENSMUST00000109134	ENSMUSP00000104762	TRANSLATION	protein_coding	-	CCDS24638.1	5	563	52	1.6	0.5	368.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005949	Ctns	ENSMUST00000006103	ENSMUSP00000006103	TRANSLATION	protein_coding	-	CCDS25001.1	1	367	0	0	5.1	130.7	6	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000005949	Ctns	ENSMUST00000108476	ENSMUSP00000104116	TRANSLATION	protein_coding	-	CCDS25001.1	1	367	0	0	5.1	130.7	6	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000005949	Ctns	ENSMUST00000150468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005949	Ctns	ENSMUST00000130101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005949	Ctns	ENSMUST00000144658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064057	Scgb3a1	ENSMUST00000043873	ENSMUSP00000043325	TRANSLATION	protein_coding	-	CCDS24619.1	1	104	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000064057	Scgb3a1	ENSMUST00000076006	ENSMUSP00000075387	TRANSLATION	protein_coding	-	CCDS36145.1	1	94	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000069744	Psmb3	ENSMUST00000129197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069744	Psmb3	ENSMUST00000138265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069744	Psmb3	ENSMUST00000103147	ENSMUSP00000099436	TRANSLATION	protein_coding	-	CCDS25328.1	1	205	0	4.5	17.5	146.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000000126	Wnt9a	ENSMUST00000000128	ENSMUSP00000000128	TRANSLATION	protein_coding	-	-	5	365	0	1.4	6.3	316	0	2,-2	-	-	13.7	ALTERNATIVE:1
ENSMUSG00000000126	Wnt9a	ENSMUST00000108783	ENSMUSP00000104411	TRANSLATION	protein_coding	-	CCDS36169.1	1	365	0	1.4	6.3	321	0	2,-2	-	-	14	PRINCIPAL:2
ENSMUSG00000034677	Gpr142	ENSMUST00000045319	ENSMUSP00000045029	TRANSLATION	protein_coding	-	CCDS25611.1	1	365	0	0.24	0.5	50.1	7	-4,-5	-	-	11.838	PRINCIPAL:3
ENSMUSG00000034677	Gpr142	ENSMUST00000106584	ENSMUSP00000102194	TRANSLATION	protein_coding	-	CCDS83922.1	1	371	0	0.24	0.5	51.5	7	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000100923	Olfr10	ENSMUST00000217290	ENSMUSP00000149724	TRANSLATION	protein_coding	-	CCDS24605.1	5	311	0	0.28	3.9	162	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000100923	Olfr10	ENSMUST00000187570	ENSMUSP00000139744	TRANSLATION	protein_coding	-	CCDS24605.1	-	311	0	0.28	3.9	162	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000018906	P4ha2	ENSMUST00000141258	ENSMUSP00000118608	TRANSLATION	nonsense_mediated_decay	start	-	5	25	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000138477	ENSMUSP00000121119	TRANSLATION	protein_coding	stop	-	5	158	0	3.93	0	132	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000142583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018906	P4ha2	ENSMUST00000155299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018906	P4ha2	ENSMUST00000135653	ENSMUSP00000119861	TRANSLATION	protein_coding	stop	-	2	112	0	2.68	0	77.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000151218	ENSMUSP00000118384	TRANSLATION	protein_coding	stop	-	5	128	0	3.18	0	84	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000126840	ENSMUSP00000121955	TRANSLATION	protein_coding	stop	-	5	108	0	2.68	0	76.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000093107	ENSMUSP00000091749	TRANSLATION	protein_coding	-	CCDS48797.1	1	535	7	9.83	5.1	186.3	0	4,-1	-	-	19.958	ALTERNATIVE:1
ENSMUSG00000018906	P4ha2	ENSMUST00000019050	ENSMUSP00000019050	TRANSLATION	protein_coding	-	CCDS24691.1	5	537	7	9.755	5.1	187	0	4,-1	-	-	19.85	PRINCIPAL:3
ENSMUSG00000018906	P4ha2	ENSMUST00000135596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018906	P4ha2	ENSMUST00000139315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018906	P4ha2	ENSMUST00000174616	ENSMUSP00000133275	TRANSLATION	protein_coding	-	CCDS48797.1	5	535	7	9.83	5.1	186.3	0	4,-1	-	-	19.958	ALTERNATIVE:1
ENSMUSG00000018906	P4ha2	ENSMUST00000125651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018906	P4ha2	ENSMUST00000129499	ENSMUSP00000115245	TRANSLATION	protein_coding	stop	-	5	52	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000018906	P4ha2	ENSMUST00000125132	ENSMUSP00000121543	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0.6	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000058728	Cd300c	ENSMUST00000092466	ENSMUSP00000090123	TRANSLATION	protein_coding	-	-	5	229	0	1.32	0.5	52.3	1	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000058728	Cd300c	ENSMUST00000061637	ENSMUSP00000052647	TRANSLATION	protein_coding	-	-	5	229	0	1.32	0.5	52.3	1	4,-1	-	-	12	PRINCIPAL:5
ENSMUSG00000058728	Cd300c	ENSMUST00000106580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018651	Tada2a	ENSMUST00000141852	ENSMUSP00000119022	TRANSLATION	protein_coding	stop	-	3	235	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018651	Tada2a	ENSMUST00000018795	ENSMUSP00000018795	TRANSLATION	protein_coding	-	CCDS25183.1	1	443	8	4.75	10.8	74.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018651	Tada2a	ENSMUST00000134994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018651	Tada2a	ENSMUST00000125566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018651	Tada2a	ENSMUST00000156151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042302	Ehbp1	ENSMUST00000109563	ENSMUSP00000105191	TRANSLATION	protein_coding	-	CCDS56762.1	1	1231	0	4.8	0.5	312.8	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000042302	Ehbp1	ENSMUST00000137594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042302	Ehbp1	ENSMUST00000180360	ENSMUSP00000136697	TRANSLATION	protein_coding	-	CCDS24469.1	5	1206	0	4.8	0.5	312.8	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000042302	Ehbp1	ENSMUST00000134293	ENSMUSP00000118583	TRANSLATION	protein_coding	stop	-	5	308	0	0	0	94.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042302	Ehbp1	ENSMUST00000152372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042302	Ehbp1	ENSMUST00000136762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042302	Ehbp1	ENSMUST00000045167	ENSMUSP00000037489	TRANSLATION	protein_coding	-	CCDS24469.1	1	1206	0	4.8	0.5	312.8	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000035413	Tmem98	ENSMUST00000040865	ENSMUSP00000042825	TRANSLATION	protein_coding	-	CCDS25135.1	1	226	0	2.278	12.8	34	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000581	C1d	ENSMUST00000000594	ENSMUSP00000000594	TRANSLATION	protein_coding	-	CCDS24451.1	1	141	0	0	9.5	66.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000000581	C1d	ENSMUST00000130330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000581	C1d	ENSMUST00000156784	ENSMUSP00000121134	TRANSLATION	protein_coding	stop	-	2	118	0	0	0	66.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000581	C1d	ENSMUST00000131227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000581	C1d	ENSMUST00000135568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051650	B3gnt2	ENSMUST00000055549	ENSMUSP00000053528	TRANSLATION	protein_coding	-	CCDS24471.1	1	397	0	0	1.5	140.4	1	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051650	B3gnt2	ENSMUST00000189990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051650	B3gnt2	ENSMUST00000173660	ENSMUSP00000133306	TRANSLATION	protein_coding	stop	-	3	201	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000051650	B3gnt2	ENSMUST00000062844	ENSMUSP00000060247	TRANSLATION	protein_coding	-	CCDS24471.1	1	397	0	0	1.5	140.4	1	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078627	Marchf10	ENSMUST00000151305	ENSMUSP00000118401	TRANSLATION	protein_coding	start/stop	-	3	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078627	Marchf10	ENSMUST00000049995	ENSMUSP00000063198	TRANSLATION	protein_coding	-	CCDS48955.1	5	788	8	0.9	1.5	46.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078627	Marchf10	ENSMUST00000100332	ENSMUSP00000097906	TRANSLATION	protein_coding	-	CCDS25540.1	1	237	0	0	2.7	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000078627	Marchf10	ENSMUST00000138977	ENSMUSP00000121919	TRANSLATION	protein_coding	-	CCDS48955.1	5	788	8	0.9	1.5	46.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078627	Marchf10	ENSMUST00000130685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061462	Obscn	ENSMUST00000020732	ENSMUSP00000020732	TRANSLATION	protein_coding	-	-	5	7176	0	44.143	0	2673.2	0	-4,-2	-	-	0	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000238202	ENSMUSP00000158662	TRANSLATION	protein_coding	start/stop	-	-	296	0	2.89	0	56.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000238536	ENSMUSP00000158795	TRANSLATION	protein_coding	-	-	-	8886	5	54.623	0	3145	0	-4,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000061462	Obscn	ENSMUST00000138587	ENSMUSP00000121092	TRANSLATION	protein_coding	start	-	5	923	3	4.42	0	198.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000219084	ENSMUSP00000151217	TRANSLATION	protein_coding	-	-	5	6661	0	38.403	0	2250.4	0	-4,-2	-	-	0	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000238245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061462	Obscn	ENSMUST00000132238	ENSMUSP00000116487	TRANSLATION	nonsense_mediated_decay	start	-	5	221	0	1.01	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000047441	ENSMUSP00000038264	TRANSLATION	protein_coding	-	CCDS56775.1	5	8032	5	49.303	0.5	2829.5	0	-4,-2	-	-	5	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000133040	ENSMUSP00000122181	TRANSLATION	protein_coding	start/stop	-	5	849	0	8.16	0	304.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061462	Obscn	ENSMUST00000052872	ENSMUSP00000049737	TRANSLATION	protein_coding	-	CCDS56774.1	5	7496	0	44.143	0.5	2673.1	0	-4,-2	-	-	0	MINOR
ENSMUSG00000018239	Zcchc10	ENSMUST00000141585	ENSMUSP00000130089	TRANSLATION	nonsense_mediated_decay	start	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018239	Zcchc10	ENSMUST00000018383	ENSMUSP00000018383	TRANSLATION	protein_coding	-	CCDS24675.1	1	178	4	0	0.5	65.1	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000035385	Ccl2	ENSMUST00000124479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035385	Ccl2	ENSMUST00000000193	ENSMUSP00000000193	TRANSLATION	protein_coding	-	CCDS25139.1	1	148	0	1.75	0.5	83.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000049755	Zfp672	ENSMUST00000065533	ENSMUSP00000070680	TRANSLATION	protein_coding	-	-	-	117	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000049755	Zfp672	ENSMUST00000130217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049755	Zfp672	ENSMUST00000064786	ENSMUSP00000070567	TRANSLATION	protein_coding	-	CCDS24727.1	1	468	52	1.4	1.5	209.7	0	-4,-7	-	-	16.668	PRINCIPAL:1
ENSMUSG00000049755	Zfp672	ENSMUST00000186859	ENSMUSP00000140236	TRANSLATION	protein_coding	stop	-	2	89	11	1.8	0	36.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049755	Zfp672	ENSMUST00000155662	ENSMUSP00000114561	TRANSLATION	protein_coding	stop	-	2	55	6	1	0	20.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049755	Zfp672	ENSMUST00000185661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049755	Zfp672	ENSMUST00000108829	ENSMUSP00000104457	TRANSLATION	protein_coding	-	CCDS24727.1	1	468	52	1.4	1.5	209.7	0	-4,-7	-	-	16.668	PRINCIPAL:1
ENSMUSG00000049755	Zfp672	ENSMUST00000135097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049755	Zfp672	ENSMUST00000057836	ENSMUSP00000060088	TRANSLATION	protein_coding	-	CCDS24727.1	1	468	52	1.4	1.5	209.7	0	-4,-7	-	-	16.668	PRINCIPAL:1
ENSMUSG00000069769	Msi2	ENSMUST00000138790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069769	Msi2	ENSMUST00000107908	ENSMUSP00000103541	TRANSLATION	protein_coding	-	CCDS48882.1	5	158	0	3.175	0.5	64.2	0	-4,-5	-	-	4.206	MINOR
ENSMUSG00000069769	Msi2	ENSMUST00000144699	ENSMUSP00000119684	TRANSLATION	protein_coding	stop	-	3	113	0	3.5	0	64.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069769	Msi2	ENSMUST00000126293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069769	Msi2	ENSMUST00000148013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069769	Msi2	ENSMUST00000092794	ENSMUSP00000090470	TRANSLATION	protein_coding	-	CCDS56796.1	1	346	0	5.465	9.5	117.8	0	-4,-5	-	-	14.55	PRINCIPAL:2
ENSMUSG00000069769	Msi2	ENSMUST00000107909	ENSMUSP00000103542	TRANSLATION	protein_coding	-	-	1	328	0	5.465	11	117.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000025574	Tk1	ENSMUST00000150027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000154790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000141939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000153298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000129852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000153872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025574	Tk1	ENSMUST00000026661	ENSMUSP00000026661	TRANSLATION	protein_coding	-	CCDS25692.1	1	233	25	6.08	2.7	237.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062278	Gm11562	ENSMUST00000073853	ENSMUSP00000073519	TRANSLATION	protein_coding	-	CCDS56800.1	-	136	0	0	1.7	27.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025582	Nptx1	ENSMUST00000026670	ENSMUSP00000026670	TRANSLATION	protein_coding	-	CCDS25719.1	1	432	6	1.76	7.5	116	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000020781	Tsen54	ENSMUST00000129765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020781	Tsen54	ENSMUST00000106481	ENSMUSP00000102090	TRANSLATION	protein_coding	-	-	1	486	0	1.74	0	68.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020781	Tsen54	ENSMUST00000128266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020781	Tsen54	ENSMUST00000021134	ENSMUSP00000021134	TRANSLATION	protein_coding	-	CCDS25648.1	1	525	0	1.74	1.5	68.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020781	Tsen54	ENSMUST00000157061	ENSMUSP00000118342	TRANSLATION	protein_coding	start/stop	-	2	165	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020781	Tsen54	ENSMUST00000141748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020781	Tsen54	ENSMUST00000154304	ENSMUSP00000116955	TRANSLATION	protein_coding	start	-	3	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020781	Tsen54	ENSMUST00000136343	ENSMUSP00000120506	TRANSLATION	protein_coding	start/stop	-	3	275	0	1.04	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020698	Cct6b	ENSMUST00000021040	ENSMUSP00000021040	TRANSLATION	protein_coding	-	CCDS25145.1	1	531	24	13	15.5	531.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000020698	Cct6b	ENSMUST00000100722	ENSMUSP00000098288	TRANSLATION	protein_coding	-	CCDS70265.1	1	492	20	12	0.5	501.9	0	-4,-5	-	-	11.538	MINOR
ENSMUSG00000020677	Ddx52	ENSMUST00000130982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020677	Ddx52	ENSMUST00000049257	ENSMUSP00000048802	TRANSLATION	protein_coding	-	CCDS25180.1	1	598	19	8.75	1.5	230.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025372	Baiap2	ENSMUST00000075180	ENSMUSP00000074674	TRANSLATION	protein_coding	-	CCDS25724.1	1	522	0	8.25	6.3	366.3	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000025372	Baiap2	ENSMUST00000103021	ENSMUSP00000099310	TRANSLATION	protein_coding	-	CCDS25723.1	1	482	0	8.25	2.7	366.3	0	-4,-5	-	-	12.642	MINOR
ENSMUSG00000025372	Baiap2	ENSMUST00000106231	ENSMUSP00000101838	TRANSLATION	protein_coding	-	-	1	513	0	8.25	0	366.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025372	Baiap2	ENSMUST00000131580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025372	Baiap2	ENSMUST00000146960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025372	Baiap2	ENSMUST00000106233	ENSMUSP00000101840	TRANSLATION	protein_coding	-	-	5	521	0	8.25	6.3	366.3	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000025372	Baiap2	ENSMUST00000152523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025372	Baiap2	ENSMUST00000026436	ENSMUSP00000026436	TRANSLATION	protein_coding	-	CCDS25722.1	1	535	0	8.25	6.3	366.3	0	-4,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000025372	Baiap2	ENSMUST00000146566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020528	Prpsap2	ENSMUST00000151966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020528	Prpsap2	ENSMUST00000004955	ENSMUSP00000004955	TRANSLATION	protein_coding	-	CCDS24819.1	1	369	7	8.5	12.8	472	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020528	Prpsap2	ENSMUST00000168115	ENSMUSP00000126274	TRANSLATION	protein_coding	-	CCDS24819.1	1	369	7	8.5	12.8	472	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020528	Prpsap2	ENSMUST00000123575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039294	Cybc1	ENSMUST00000169393	ENSMUSP00000127260	TRANSLATION	protein_coding	stop	-	3	116	0	0	0	55.8	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000039294	Cybc1	ENSMUST00000147490	ENSMUSP00000117829	TRANSLATION	protein_coding	stop	-	2	131	0	0	0	215.4	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000039294	Cybc1	ENSMUST00000106115	ENSMUSP00000101721	TRANSLATION	protein_coding	-	CCDS25771.1	1	187	0	0	10.8	280.5	2	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000039294	Cybc1	ENSMUST00000149351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039294	Cybc1	ENSMUST00000137299	ENSMUSP00000120541	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	250.5	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000039294	Cybc1	ENSMUST00000156214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039294	Cybc1	ENSMUST00000133535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039294	Cybc1	ENSMUST00000038709	ENSMUSP00000042277	TRANSLATION	protein_coding	-	CCDS25771.1	1	187	0	0	10.8	280.5	2	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000051617	Krt9	ENSMUST00000059707	ENSMUSP00000055255	TRANSLATION	protein_coding	-	CCDS25412.1	1	743	0	1.96	0.5	304.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000057054	Inca1	ENSMUST00000108542	ENSMUSP00000104182	TRANSLATION	protein_coding	-	CCDS24964.1	1	231	0	0	1.5	290.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057054	Inca1	ENSMUST00000126114	ENSMUSP00000118761	TRANSLATION	protein_coding	-	CCDS24964.1	1	231	0	0	1.5	290.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057054	Inca1	ENSMUST00000073625	ENSMUSP00000073311	TRANSLATION	protein_coding	-	CCDS24964.1	1	231	0	0	1.5	290.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057054	Inca1	ENSMUST00000108543	ENSMUSP00000104183	TRANSLATION	protein_coding	-	CCDS56789.1	1	196	0	0	1.7	250.6	0	-4,-5	-	-	3.606	MINOR
ENSMUSG00000057054	Inca1	ENSMUST00000108541	ENSMUSP00000104181	TRANSLATION	protein_coding	-	CCDS24964.1	1	231	0	0	1.5	290.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069609	Cd300ld4	ENSMUST00000100240	ENSMUSP00000097811	TRANSLATION	protein_coding	-	CCDS36368.1	1	245	0	1	0.5	52.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000009210	Prr29	ENSMUST00000009354	ENSMUSP00000009354	TRANSLATION	protein_coding	-	-	1	137	0	0	0	52.8	0	-4,-6	-	-	4.362	MINOR
ENSMUSG00000009210	Prr29	ENSMUST00000190268	ENSMUSP00000139960	TRANSLATION	protein_coding	-	-	5	241	0	0	0	72.6	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000009210	Prr29	ENSMUST00000185986	ENSMUSP00000140365	TRANSLATION	protein_coding	-	-	5	180	0	0	0	72.6	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000009210	Prr29	ENSMUST00000190795	ENSMUSP00000140541	TRANSLATION	protein_coding	-	-	5	137	0	0	0	52.8	0	-4,-6	-	-	4.362	MINOR
ENSMUSG00000009210	Prr29	ENSMUST00000106816	ENSMUSP00000102429	TRANSLATION	protein_coding	-	CCDS48962.1	1	187	0	0	1.5	72.6	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000009210	Prr29	ENSMUST00000188561	ENSMUSP00000140194	TRANSLATION	protein_coding	-	-	5	107	0	0	0.5	63.1	0	-4,-7	-	-	5.214	MINOR
ENSMUSG00000047284	Neurl4	ENSMUST00000176614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047284	Neurl4	ENSMUST00000177476	ENSMUSP00000135185	TRANSLATION	protein_coding	-	CCDS70220.1	1	1561	0	9.08	1.5	840.7	0	-4,-5	-	-	11.742	ALTERNATIVE:2
ENSMUSG00000047284	Neurl4	ENSMUST00000175742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047284	Neurl4	ENSMUST00000175761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047284	Neurl4	ENSMUST00000108617	ENSMUSP00000104257	TRANSLATION	protein_coding	-	-	5	1541	0	9.08	0.5	845	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047284	Neurl4	ENSMUST00000177138	ENSMUSP00000135277	TRANSLATION	protein_coding	-	CCDS70221.1	1	1539	0	9.08	0.5	840.7	0	-4,-5	-	-	11.742	ALTERNATIVE:2
ENSMUSG00000047284	Neurl4	ENSMUST00000132183	ENSMUSP00000118868	TRANSLATION	protein_coding	start	-	5	216	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047284	Neurl4	ENSMUST00000133203	ENSMUSP00000117917	TRANSLATION	nonsense_mediated_decay	start	-	5	972	0	7.08	0	654	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047284	Neurl4	ENSMUST00000143861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047284	Neurl4	ENSMUST00000153041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047284	Neurl4	ENSMUST00000177160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047284	Neurl4	ENSMUST00000129475	ENSMUSP00000135733	TRANSLATION	nonsense_mediated_decay	start	-	5	249	0	4.18	0	178.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047284	Neurl4	ENSMUST00000061837	ENSMUSP00000053235	TRANSLATION	protein_coding	-	CCDS24921.1	5	1563	0	9.08	1.5	845	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020546	Stxbp4	ENSMUST00000020858	ENSMUSP00000020858	TRANSLATION	protein_coding	stop	-	1	533	0	3.05	0	38.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020546	Stxbp4	ENSMUST00000143203	ENSMUSP00000116191	TRANSLATION	protein_coding	-	CCDS25242.1	1	557	0	4.35	1.7	81.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020546	Stxbp4	ENSMUST00000107872	ENSMUSP00000103504	TRANSLATION	protein_coding	-	-	1	226	0	3.05	0	38.4	0	-4,-7	-	-	6.228	MINOR
ENSMUSG00000020546	Stxbp4	ENSMUST00000132905	ENSMUSP00000117910	TRANSLATION	protein_coding	stop	-	3	30	0	0.9	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020546	Stxbp4	ENSMUST00000123260	ENSMUSP00000122365	TRANSLATION	protein_coding	start	-	1	154	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020546	Stxbp4	ENSMUST00000132078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020546	Stxbp4	ENSMUST00000107875	ENSMUSP00000103507	TRANSLATION	protein_coding	-	-	1	258	0	3.05	0	38.4	0	-4,-7	-	-	6.228	MINOR
ENSMUSG00000006920	Ezh1	ENSMUST00000138835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006920	Ezh1	ENSMUST00000107285	ENSMUSP00000102906	TRANSLATION	protein_coding	-	CCDS36335.1	1	750	26	15.23	5.1	126	0	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000006920	Ezh1	ENSMUST00000134622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006920	Ezh1	ENSMUST00000146884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006920	Ezh1	ENSMUST00000151291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006920	Ezh1	ENSMUST00000100417	ENSMUSP00000097984	TRANSLATION	protein_coding	-	-	1	579	7	10.48	0	61.9	0	-4,-5	-	-	2.154	MINOR
ENSMUSG00000006920	Ezh1	ENSMUST00000107284	ENSMUSP00000102905	TRANSLATION	protein_coding	-	-	1	747	26	15.23	5.1	126	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000006920	Ezh1	ENSMUST00000128974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006920	Ezh1	ENSMUST00000154211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060938	Rpl26	ENSMUST00000128952	ENSMUSP00000119329	TRANSLATION	protein_coding	stop	-	2	103	0	2	0	145.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060938	Rpl26	ENSMUST00000167436	ENSMUSP00000129072	TRANSLATION	protein_coding	-	CCDS36187.1	1	145	0	2.6	19.5	181.2	0	-4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000060938	Rpl26	ENSMUST00000101014	ENSMUSP00000098576	TRANSLATION	protein_coding	-	-	5	143	0	2.6	19.5	172.8	0	-4,-2	-	-	15.496	ALTERNATIVE:1
ENSMUSG00000060938	Rpl26	ENSMUST00000134403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060938	Rpl26	ENSMUST00000073471	ENSMUSP00000073175	TRANSLATION	protein_coding	-	CCDS36187.1	1	145	0	2.6	19.5	181.2	0	-4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000060938	Rpl26	ENSMUST00000138973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020444	Guk1	ENSMUST00000170202	ENSMUSP00000127566	TRANSLATION	protein_coding	-	CCDS24762.2	1	219	24	5.885	3.9	242.5	0	-1,1	-	-	19	PRINCIPAL:1
ENSMUSG00000020444	Guk1	ENSMUST00000172714	ENSMUSP00000134236	TRANSLATION	protein_coding	stop	-	3	31	7	1	0	28.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020444	Guk1	ENSMUST00000170895	ENSMUSP00000130214	TRANSLATION	protein_coding	-	CCDS48809.1	5	207	24	5.726	0.5	242.5	0	-4,-7	-	-	17.682	MINOR
ENSMUSG00000020444	Guk1	ENSMUST00000151211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020444	Guk1	ENSMUST00000154386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020444	Guk1	ENSMUST00000130815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009090	Ap1b1	ENSMUST00000101613	ENSMUSP00000099134	TRANSLATION	protein_coding	-	-	5	923	0	17.95	0	577.1	0	-4,-5	-	-	4.5	MINOR
ENSMUSG00000009090	Ap1b1	ENSMUST00000109897	ENSMUSP00000105523	TRANSLATION	protein_coding	-	-	5	916	0	17.95	0	577.1	0	-4,-5	-	-	4.5	MINOR
ENSMUSG00000009090	Ap1b1	ENSMUST00000009234	ENSMUSP00000009234	TRANSLATION	protein_coding	-	CCDS36100.1	1	943	0	18.7	0.5	810.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009090	Ap1b1	ENSMUST00000142325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009090	Ap1b1	ENSMUST00000137292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009090	Ap1b1	ENSMUST00000144426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009090	Ap1b1	ENSMUST00000133007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009090	Ap1b1	ENSMUST00000145704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009090	Ap1b1	ENSMUST00000133014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033987	Dnah17	ENSMUST00000217584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033987	Dnah17	ENSMUST00000018719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033987	Dnah17	ENSMUST00000106308	ENSMUSP00000101915	TRANSLATION	protein_coding	-	-	5	4481	63	36.836	0	4334.5	0	-4,-5	-	-	16.38	PRINCIPAL:5
ENSMUSG00000033987	Dnah17	ENSMUST00000084803	ENSMUSP00000081864	TRANSLATION	protein_coding	-	CCDS48994.1	5	4453	63	36.14	0.5	4347.7	0	-4,-5	-	-	15.78	MINOR
ENSMUSG00000033987	Dnah17	ENSMUST00000132685	ENSMUSP00000120542	TRANSLATION	protein_coding	-	-	5	4459	63	36.338	0.5	4361.5	0	-4,-5	-	-	17.004	ALTERNATIVE:2
ENSMUSG00000048878	Hexim1	ENSMUST00000053063	ENSMUSP00000057339	TRANSLATION	protein_coding	-	CCDS25513.1	-	356	0	0.6	5.1	185.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000078650	G6pc	ENSMUST00000019469	ENSMUSP00000019469	TRANSLATION	protein_coding	-	CCDS25466.1	1	357	6	0	8.8	63.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044367	Slc16a13	ENSMUST00000159867	ENSMUSP00000124687	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000044367	Slc16a13	ENSMUST00000141290	ENSMUSP00000116316	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000044367	Slc16a13	ENSMUST00000190533	ENSMUSP00000139873	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000044367	Slc16a13	ENSMUST00000060010	ENSMUSP00000053218	TRANSLATION	protein_coding	-	CCDS24938.1	1	428	0	0	5.1	74.9	13	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000020690	Efcab3	ENSMUST00000154543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020690	Efcab3	ENSMUST00000021029	ENSMUSP00000021029	TRANSLATION	protein_coding	-	CCDS36355.1	1	432	5	1.47	1.5	40.7	0	-4,-6	-	-	13.302	PRINCIPAL:1
ENSMUSG00000020690	Efcab3	ENSMUST00000136876	ENSMUSP00000120875	TRANSLATION	protein_coding	start/stop	-	5	222	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020690	Efcab3	ENSMUST00000137086	ENSMUSP00000114580	TRANSLATION	protein_coding	stop	-	1	359	9	1.47	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051452	Gm11437	ENSMUST00000050771	ENSMUSP00000056084	TRANSLATION	protein_coding	-	CCDS25184.1	1	290	0	0	1.5	320.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044649	Krtap4-2	ENSMUST00000058987	ENSMUSP00000056162	TRANSLATION	protein_coding	-	CCDS25392.1	-	167	0	0	0.5	85	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020929	Eftud2	ENSMUST00000123833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000107060	ENSMUSP00000102675	TRANSLATION	protein_coding	-	CCDS48947.1	1	971	15	25.07	1.5	528.1	0	-4,-5	-	-	18.126	MINOR
ENSMUSG00000020929	Eftud2	ENSMUST00000173974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000148209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000173679	ENSMUSP00000134327	TRANSLATION	protein_coding	-	-	5	962	15	24.74	1.2	502.7	0	-4,-5	-	-	15.842	MINOR
ENSMUSG00000020929	Eftud2	ENSMUST00000147368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000138483	ENSMUSP00000134725	TRANSLATION	nonsense_mediated_decay	start	-	5	30	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020929	Eftud2	ENSMUST00000141273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000143323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000132543	ENSMUSP00000133732	TRANSLATION	nonsense_mediated_decay	start	-	3	85	0	2.11	0	57.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020929	Eftud2	ENSMUST00000172611	ENSMUSP00000134316	TRANSLATION	protein_coding	start	-	3	98	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020929	Eftud2	ENSMUST00000131678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020929	Eftud2	ENSMUST00000021306	ENSMUSP00000021306	TRANSLATION	protein_coding	-	CCDS48948.1	5	972	15	25.07	12.8	528.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000045671	Spred2	ENSMUST00000093299	ENSMUSP00000090988	TRANSLATION	protein_coding	-	-	5	437	0	1.955	0	125.5	1	-4,-5	-	-	10.632	MINOR
ENSMUSG00000045671	Spred2	ENSMUST00000123036	ENSMUSP00000115103	TRANSLATION	protein_coding	stop	-	5	229	0	1.625	0	32.9	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000045671	Spred2	ENSMUST00000093298	ENSMUSP00000090987	TRANSLATION	protein_coding	-	CCDS24454.1	1	410	0	2.33	1.5	132.2	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043692	Olfr399	ENSMUST00000215915	ENSMUSP00000149917	TRANSLATION	protein_coding	-	CCDS25024.1	5	311	0	0.42	3.9	184.3	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000043692	Olfr399	ENSMUST00000059440	ENSMUSP00000056508	TRANSLATION	protein_coding	-	CCDS25024.1	-	311	0	0.42	3.9	184.3	4	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000059279	Olfr224	ENSMUST00000217009	ENSMUSP00000150268	TRANSLATION	protein_coding	-	CCDS48805.1	5	314	0	0.42	1.5	161.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000059279	Olfr224	ENSMUST00000215322	ENSMUSP00000150143	TRANSLATION	protein_coding	-	CCDS48805.1	5	314	0	0.42	1.5	161.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000059279	Olfr224	ENSMUST00000216758	ENSMUSP00000150140	TRANSLATION	protein_coding	-	CCDS48805.1	5	314	0	0.42	1.5	161.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000059279	Olfr224	ENSMUST00000081102	ENSMUSP00000079881	TRANSLATION	protein_coding	-	CCDS48805.1	-	314	0	0.42	1.5	161.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034579	Pla2g3	ENSMUST00000151860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034579	Pla2g3	ENSMUST00000044682	ENSMUSP00000041571	TRANSLATION	nonsense_mediated_decay	-	-	2	446	8	1.6	0.5	145.2	0	2,-1	-	-	-1	MINOR
ENSMUSG00000034579	Pla2g3	ENSMUST00000064265	ENSMUSP00000068699	TRANSLATION	protein_coding	-	CCDS48740.1	1	504	8	1.6	0.5	145.2	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046207	Pik3r6	ENSMUST00000153671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046207	Pik3r6	ENSMUST00000126069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046207	Pik3r6	ENSMUST00000060441	ENSMUSP00000052522	TRANSLATION	protein_coding	-	CCDS36186.1	1	756	0	0	1.5	177.9	0	-4,-5	-	-	5.736	ALTERNATIVE:2
ENSMUSG00000046207	Pik3r6	ENSMUST00000131669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046207	Pik3r6	ENSMUST00000102613	ENSMUSP00000099673	TRANSLATION	protein_coding	-	CCDS24866.1	1	752	0	0	1.5	182.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000043029	Trpv3	ENSMUST00000049676	ENSMUSP00000053755	TRANSLATION	protein_coding	-	CCDS25004.1	1	791	7	11.6	5.1	69.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003518	Dusp3	ENSMUST00000125794	ENSMUSP00000135343	TRANSLATION	protein_coding	start	-	3	118	7	2.65	0	97	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003518	Dusp3	ENSMUST00000107173	ENSMUSP00000102791	TRANSLATION	protein_coding	-	-	2	210	8	5	1	131.7	0	-4,-6	-	-	18	MINOR
ENSMUSG00000003518	Dusp3	ENSMUST00000003612	ENSMUSP00000003612	TRANSLATION	protein_coding	-	CCDS25482.1	1	185	8	5	8.3	131.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003518	Dusp3	ENSMUST00000143177	ENSMUSP00000135821	TRANSLATION	protein_coding	-	-	3	82	0	1.2	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000003518	Dusp3	ENSMUST00000176261	ENSMUSP00000135443	TRANSLATION	protein_coding	-	-	3	145	1	3.475	0	46.5	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000003518	Dusp3	ENSMUST00000151678	ENSMUSP00000135384	TRANSLATION	protein_coding	-	-	1	117	8	3.25	0	112.8	0	-4,-5	-	-	13.368	MINOR
ENSMUSG00000003518	Dusp3	ENSMUST00000107172	ENSMUSP00000102790	TRANSLATION	protein_coding	-	CCDS25482.1	3	185	8	5	8.3	131.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041165	Spem1	ENSMUST00000045771	ENSMUSP00000037500	TRANSLATION	protein_coding	-	CCDS36199.1	1	310	0	0	1.5	70	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000018727	Cpsf4l	ENSMUST00000106617	ENSMUSP00000102228	TRANSLATION	protein_coding	-	-	1	153	17	2	0	21.5	0	-4,-5	-	-	12.318	MINOR
ENSMUSG00000018727	Cpsf4l	ENSMUST00000173655	ENSMUSP00000133451	TRANSLATION	protein_coding	-	CCDS25603.2	1	228	20	2	0.5	55.7	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000018727	Cpsf4l	ENSMUST00000018871	ENSMUSP00000018871	TRANSLATION	protein_coding	-	CCDS25602.1	1	190	17	2	0.5	0	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000018727	Cpsf4l	ENSMUST00000100248	ENSMUSP00000097819	TRANSLATION	protein_coding	-	CCDS48977.1	5	280	20	2	0.5	54.8	0	-4,-5	-	-	17.904	ALTERNATIVE:2
ENSMUSG00000018727	Cpsf4l	ENSMUST00000151396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017421	Zfp207	ENSMUST00000188489	ENSMUSP00000139653	TRANSLATION	protein_coding	-	CCDS48864.1	2	464	7	0	6.3	0	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000017421	Zfp207	ENSMUST00000108216	ENSMUSP00000103851	TRANSLATION	protein_coding	-	-	2	329	7	0	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000017421	Zfp207	ENSMUST00000165565	ENSMUSP00000132968	TRANSLATION	protein_coding	-	CCDS48865.1	1	479	7	0	1.5	0	0	-4,-5	-	-	6.188	MINOR
ENSMUSG00000017421	Zfp207	ENSMUST00000178665	ENSMUSP00000136727	TRANSLATION	nonsense_mediated_decay	-	-	2	464	7	0	6.3	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017421	Zfp207	ENSMUST00000017567	ENSMUSP00000017567	TRANSLATION	protein_coding	-	CCDS48864.1	1	464	7	0	6.3	0	0	-4,-5	-	-	8	ALTERNATIVE:1
ENSMUSG00000017421	Zfp207	ENSMUST00000053740	ENSMUSP00000054168	TRANSLATION	protein_coding	-	CCDS48863.1	1	495	7	0	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:4
ENSMUSG00000017421	Zfp207	ENSMUST00000153824	ENSMUSP00000115924	TRANSLATION	protein_coding	stop	-	2	227	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017421	Zfp207	ENSMUST00000123726	ENSMUSP00000137795	TRANSLATION	nonsense_mediated_decay	start	-	5	342	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020401	Fam71b	ENSMUST00000063166	ENSMUSP00000055079	TRANSLATION	protein_coding	-	CCDS24576.1	1	665	0	0	0.5	100.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020401	Fam71b	ENSMUST00000139280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017550	Atad5	ENSMUST00000108239	ENSMUSP00000103874	TRANSLATION	protein_coding	-	-	5	1823	13	1.665	0.5	26.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000017550	Atad5	ENSMUST00000017694	ENSMUSP00000017694	TRANSLATION	protein_coding	-	CCDS25127.1	1	1826	13	1.665	0.5	26.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000017550	Atad5	ENSMUST00000154168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017550	Atad5	ENSMUST00000151815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075410	Prcd	ENSMUST00000178875	ENSMUSP00000136058	TRANSLATION	protein_coding	-	-	5	106	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075410	Prcd	ENSMUST00000116318	ENSMUSP00000112020	TRANSLATION	protein_coding	-	CCDS48987.1	1	53	0	0	6.3	126	0	1,1	-	-	8	PRINCIPAL:1
ENSMUSG00000075410	Prcd	ENSMUST00000106381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075410	Prcd	ENSMUST00000148484	ENSMUSP00000119671	TRANSLATION	protein_coding	-	CCDS48987.1	1	53	0	0	6.3	126	0	1,1	-	-	8	PRINCIPAL:1
ENSMUSG00000075410	Prcd	ENSMUST00000156088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044243	Bhlha9	ENSMUST00000056184	ENSMUSP00000050516	TRANSLATION	protein_coding	-	CCDS25068.2	-	231	0	0.2	1.5	43.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000010358	Ifi35	ENSMUST00000131024	ENSMUSP00000117189	TRANSLATION	nonsense_mediated_decay	-	-	2	54	0	0	0	23.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000010358	Ifi35	ENSMUST00000125958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010358	Ifi35	ENSMUST00000010502	ENSMUSP00000010502	TRANSLATION	protein_coding	-	CCDS25471.1	1	286	0	0	3.9	253.1	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000020439	Smtn	ENSMUST00000151804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020439	Smtn	ENSMUST00000144635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020439	Smtn	ENSMUST00000156201	ENSMUSP00000118750	TRANSLATION	protein_coding	stop	-	5	140	0	0	0	104.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020439	Smtn	ENSMUST00000020721	ENSMUSP00000020721	TRANSLATION	protein_coding	-	CCDS24366.1	1	921	0	3.5	0.5	261.5	0	-4,-5	-	-	11.898	PRINCIPAL:2
ENSMUSG00000020439	Smtn	ENSMUST00000075118	ENSMUSP00000074621	TRANSLATION	protein_coding	-	CCDS70129.1	1	923	0	2.8	0.5	256.7	0	-4,-5	-	-	10.212	MINOR
ENSMUSG00000020439	Smtn	ENSMUST00000170588	ENSMUSP00000133155	TRANSLATION	protein_coding	-	CCDS24366.1	1	921	0	3.5	0.5	261.5	0	-4,-5	-	-	11.898	PRINCIPAL:2
ENSMUSG00000020439	Smtn	ENSMUST00000020718	ENSMUSP00000020718	TRANSLATION	protein_coding	-	-	1	436	0	3.5	0	156.6	0	-4,-5	-	-	5.898	MINOR
ENSMUSG00000020439	Smtn	ENSMUST00000136243	ENSMUSP00000117307	TRANSLATION	protein_coding	stop	-	5	122	0	0	0	104.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020439	Smtn	ENSMUST00000154861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020439	Smtn	ENSMUST00000110011	ENSMUSP00000105638	TRANSLATION	protein_coding	-	-	5	946	0	3.55	0	254	0	-4,-5	-	-	11.55	ALTERNATIVE:2
ENSMUSG00000020846	Rflnb	ENSMUST00000021207	ENSMUSP00000021207	TRANSLATION	protein_coding	-	CCDS48851.1	1	216	0	0	2.7	308.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046697	Enpp7	ENSMUST00000092373	ENSMUSP00000090027	TRANSLATION	protein_coding	-	-	2	446	12	3.9	0.5	254.9	0	4,-1	-	-	18	PRINCIPAL:5
ENSMUSG00000046697	Enpp7	ENSMUST00000106273	ENSMUSP00000101880	TRANSLATION	protein_coding	-	-	5	439	12	3.9	1.5	254.9	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000047511	Olfr1396	ENSMUST00000215553	ENSMUSP00000150961	TRANSLATION	protein_coding	-	CCDS24596.2	5	315	0	0.36	7.5	156.6	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047511	Olfr1396	ENSMUST00000109201	ENSMUSP00000104824	TRANSLATION	protein_coding	-	CCDS24596.2	3	315	0	0.36	7.5	156.6	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047511	Olfr1396	ENSMUST00000203007	ENSMUSP00000145057	TRANSLATION	protein_coding	-	CCDS24596.2	-	315	0	0.36	7.5	156.6	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047511	Olfr1396	ENSMUST00000060398	ENSMUSP00000056876	TRANSLATION	protein_coding	-	CCDS24596.2	5	315	0	0.36	7.5	156.6	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020514	Mrpl22	ENSMUST00000133038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020514	Mrpl22	ENSMUST00000020820	ENSMUSP00000020820	TRANSLATION	protein_coding	-	CCDS24724.1	1	206	0	4.73	1.5	90.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000020514	Mrpl22	ENSMUST00000140997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043439	Epop	ENSMUST00000052281	ENSMUSP00000051211	TRANSLATION	protein_coding	-	CCDS25322.1	-	369	0	0	0.5	71.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000069899	Gm12166	ENSMUST00000154156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069899	Gm12166	ENSMUST00000093169	ENSMUSP00000090857	TRANSLATION	protein_coding	-	-	-	159	0	0	17.3	130.6	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000091195	Gm17332	ENSMUST00000165626	ENSMUSP00000128768	TRANSLATION	protein_coding	start/stop	-	-	29	4	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000020721	Helz	ENSMUST00000153080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020721	Helz	ENSMUST00000133862	ENSMUSP00000117498	TRANSLATION	protein_coding	start	-	1	935	4	3.14	0	174.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000020721	Helz	ENSMUST00000141730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020721	Helz	ENSMUST00000100305	ENSMUSP00000097878	TRANSLATION	protein_coding	-	-	1	1616	13	3.96	0	245.3	0	-4,-5	-	-	17.922	ALTERNATIVE:2
ENSMUSG00000020721	Helz	ENSMUST00000143634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020721	Helz	ENSMUST00000075012	ENSMUSP00000074533	TRANSLATION	protein_coding	-	CCDS25569.1	1	1965	13	3.84	1.5	246.6	0	-4,-5	-	-	17.76	PRINCIPAL:2
ENSMUSG00000020721	Helz	ENSMUST00000106746	ENSMUSP00000102357	TRANSLATION	protein_coding	-	-	5	1964	13	3.96	1.5	245.3	0	-4,-5	-	-	17.922	ALTERNATIVE:2
ENSMUSG00000020721	Helz	ENSMUST00000154847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020143	Dock2	ENSMUST00000143540	ENSMUSP00000116893	TRANSLATION	nonsense_mediated_decay	-	-	2	732	0	9.8	0	605.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020143	Dock2	ENSMUST00000127846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020143	Dock2	ENSMUST00000093193	ENSMUSP00000090884	TRANSLATION	protein_coding	-	CCDS83791.1	1	1828	0	21.1	5.3	924.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000020143	Dock2	ENSMUST00000101365	ENSMUSP00000098916	TRANSLATION	protein_coding	-	-	1	1175	0	9.8	0	605.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020143	Dock2	ENSMUST00000157036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020143	Dock2	ENSMUST00000154178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020143	Dock2	ENSMUST00000101364	ENSMUSP00000098915	TRANSLATION	protein_coding	-	-	1	295	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024414	Mrpl27	ENSMUST00000125148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024414	Mrpl27	ENSMUST00000132813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024414	Mrpl27	ENSMUST00000025278	ENSMUSP00000025278	TRANSLATION	protein_coding	-	CCDS25263.1	1	148	0	3.25	6.3	0	0	1,4	-	-	8	PRINCIPAL:1
ENSMUSG00000024414	Mrpl27	ENSMUST00000129498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020299	4930524B15Rik	ENSMUST00000102829	ENSMUSP00000099893	TRANSLATION	protein_coding	-	CCDS24515.1	1	165	0	0	1.5	224.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000020374	Rasgef1c	ENSMUST00000109172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020374	Rasgef1c	ENSMUST00000093141	ENSMUSP00000090828	TRANSLATION	protein_coding	-	-	1	425	0	5.58	0	178.7	0	-4,-6	-	-	8.082	MINOR
ENSMUSG00000020374	Rasgef1c	ENSMUST00000063444	ENSMUSP00000065619	TRANSLATION	protein_coding	-	CCDS83798.1	1	469	0	6.14	5.1	225.3	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000020374	Rasgef1c	ENSMUST00000093142	ENSMUSP00000090829	TRANSLATION	protein_coding	-	CCDS24625.1	1	466	0	6.14	5.1	225.3	0	-4,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000000805	Car4	ENSMUST00000150596	ENSMUSP00000121381	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000805	Car4	ENSMUST00000103194	ENSMUSP00000099483	TRANSLATION	protein_coding	-	CCDS25190.1	1	305	10	6.5	0.5	273.2	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000805	Car4	ENSMUST00000127827	ENSMUSP00000115878	TRANSLATION	nonsense_mediated_decay	-	-	2	38	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000805	Car4	ENSMUST00000138331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000805	Car4	ENSMUST00000139416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000805	Car4	ENSMUST00000108076	ENSMUSP00000103711	TRANSLATION	protein_coding	start	-	3	164	5	3.5	0	129.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038013	Wipf2	ENSMUST00000142414	ENSMUSP00000123244	TRANSLATION	protein_coding	stop	-	2	183	0	1	0	35.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038013	Wipf2	ENSMUST00000037480	ENSMUSP00000046991	TRANSLATION	protein_coding	-	CCDS25366.1	1	440	0	1	0.5	35.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038013	Wipf2	ENSMUST00000148439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038013	Wipf2	ENSMUST00000132006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049904	Tmem17	ENSMUST00000059319	ENSMUSP00000051414	TRANSLATION	protein_coding	-	CCDS24470.1	1	198	0	0	2.7	104.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020549	Elac2	ENSMUST00000132308	ENSMUSP00000117422	TRANSLATION	protein_coding	stop	-	3	207	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020549	Elac2	ENSMUST00000101049	ENSMUSP00000098610	TRANSLATION	protein_coding	-	-	5	824	8	4.2	0	78.6	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000020549	Elac2	ENSMUST00000108697	ENSMUSP00000104337	TRANSLATION	protein_coding	-	-	5	823	8	4.2	0	78.6	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000020549	Elac2	ENSMUST00000140369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020549	Elac2	ENSMUST00000142574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020549	Elac2	ENSMUST00000128693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020549	Elac2	ENSMUST00000071891	ENSMUSP00000071788	TRANSLATION	protein_coding	-	CCDS24841.1	1	831	8	4.2	0.5	78.6	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000075595	Zfp652	ENSMUST00000107717	ENSMUSP00000103345	TRANSLATION	protein_coding	-	CCDS36287.1	5	608	32	3.04	3.9	138.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000075595	Zfp652	ENSMUST00000091565	ENSMUSP00000089153	TRANSLATION	protein_coding	-	CCDS36287.1	1	608	32	3.04	3.9	138.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000075595	Zfp652	ENSMUST00000133070	ENSMUSP00000122280	TRANSLATION	nonsense_mediated_decay	-	-	2	451	25	2.64	0	97.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075595	Zfp652	ENSMUST00000148945	ENSMUSP00000115393	TRANSLATION	nonsense_mediated_decay	-	-	5	428	26	3.04	1.2	100.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064252	Olfr329	ENSMUST00000108822	ENSMUSP00000104450	TRANSLATION	protein_coding	-	-	3	331	0	0.618	0	162.4	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000064252	Olfr329	ENSMUST00000219448	ENSMUSP00000151648	TRANSLATION	protein_coding	-	CCDS83813.1	5	318	0	0.42	2.7	162.4	8	-4,-7	-	-	10.08	MINOR
ENSMUSG00000064252	Olfr329	ENSMUST00000108823	ENSMUSP00000104451	TRANSLATION	protein_coding	-	CCDS83813.1	-	318	0	0.42	2.7	162.4	8	-4,-7	-	-	10.08	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000061287	ENSMUSP00000050597	TRANSLATION	protein_coding	-	CCDS36359.1	5	954	0	0	4.1	100.6	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000020728	Cep112	ENSMUST00000132978	ENSMUSP00000138124	TRANSLATION	protein_coding	stop	-	5	195	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000138538	ENSMUSP00000117192	TRANSLATION	protein_coding	stop	-	5	561	0	0	0	100.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000149683	ENSMUSP00000114452	TRANSLATION	protein_coding	stop	-	3	127	0	0	0	100.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000150863	ENSMUSP00000122509	TRANSLATION	protein_coding	-	-	5	1006	0	0	1.5	100.6	0	-4,-6	-	-	6.161	ALTERNATIVE:2
ENSMUSG00000020728	Cep112	ENSMUST00000130515	ENSMUSP00000114569	TRANSLATION	protein_coding	-	CCDS36359.1	5	954	0	0	4.1	100.6	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000020728	Cep112	ENSMUST00000183042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020728	Cep112	ENSMUST00000146912	ENSMUSP00000120601	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000106715	ENSMUSP00000102326	TRANSLATION	protein_coding	-	CCDS48966.1	1	173	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000143212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020728	Cep112	ENSMUST00000182729	ENSMUSP00000138235	TRANSLATION	protein_coding	-	-	5	912	0	0	2.4	100.6	0	-4,-5	-	-	6.452	ALTERNATIVE:2
ENSMUSG00000020728	Cep112	ENSMUST00000151755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020728	Cep112	ENSMUST00000106718	ENSMUSP00000102329	TRANSLATION	protein_coding	-	-	5	152	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000133670	ENSMUSP00000114627	TRANSLATION	protein_coding	start	-	5	609	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000129814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020728	Cep112	ENSMUST00000106724	ENSMUSP00000102335	TRANSLATION	protein_coding	-	CCDS48967.1	1	102	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020728	Cep112	ENSMUST00000182735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020728	Cep112	ENSMUST00000182249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034520	Gjc1	ENSMUST00000092567	ENSMUSP00000090228	TRANSLATION	protein_coding	-	CCDS25504.1	1	396	0	0.36	8.8	331.7	2	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034520	Gjc1	ENSMUST00000107075	ENSMUSP00000102690	TRANSLATION	protein_coding	-	CCDS25504.1	1	396	0	0.36	8.8	331.7	2	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034520	Gjc1	ENSMUST00000131164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034520	Gjc1	ENSMUST00000155089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034520	Gjc1	ENSMUST00000068933	ENSMUSP00000066901	TRANSLATION	protein_coding	-	CCDS25504.1	1	396	0	0.36	8.8	331.7	2	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020865	Abcc3	ENSMUST00000155253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020865	Abcc3	ENSMUST00000151124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020865	Abcc3	ENSMUST00000126566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020865	Abcc3	ENSMUST00000178136	ENSMUSP00000136343	TRANSLATION	protein_coding	-	-	1	1523	23	23.78	1.5	439.2	12	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020865	Abcc3	ENSMUST00000140985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020865	Abcc3	ENSMUST00000021231	ENSMUSP00000021231	TRANSLATION	protein_coding	-	CCDS25254.1	1	1522	23	23.58	1.5	439.2	12	-4,-7	-	-	17.598	PRINCIPAL:2
ENSMUSG00000041654	Slc39a11	ENSMUST00000125890	ENSMUSP00000115472	TRANSLATION	protein_coding	stop	-	5	200	0	0	0	35.8	9	-2,-5	-	-	-1	MINOR
ENSMUSG00000041654	Slc39a11	ENSMUST00000149034	ENSMUSP00000120929	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	9	-2,-5	-	-	-1	MINOR
ENSMUSG00000041654	Slc39a11	ENSMUST00000146031	ENSMUSP00000121286	TRANSLATION	protein_coding	stop	-	5	61	0	0	0	0	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000041654	Slc39a11	ENSMUST00000106633	ENSMUSP00000102244	TRANSLATION	protein_coding	-	CCDS48975.1	1	342	0	0	1.5	104.7	13	-2,-5	-	-	5.814	ALTERNATIVE:2
ENSMUSG00000041654	Slc39a11	ENSMUST00000042657	ENSMUSP00000037331	TRANSLATION	protein_coding	-	-	2	370	0	0	0	98.5	13	-2,-5	-	-	5.442	MINOR
ENSMUSG00000041654	Slc39a11	ENSMUST00000123153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041654	Slc39a11	ENSMUST00000136392	ENSMUSP00000117641	TRANSLATION	protein_coding	stop	-	5	42	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000041654	Slc39a11	ENSMUST00000071539	ENSMUSP00000071469	TRANSLATION	protein_coding	-	CCDS36363.1	1	335	0	0	1.5	107.8	13	-2,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000045109	Krtap4-7	ENSMUST00000055121	ENSMUSP00000053711	TRANSLATION	protein_coding	-	CCDS25393.1	-	168	0	0	0.5	41.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020738	Sumo2	ENSMUST00000153892	ENSMUSP00000115044	TRANSLATION	protein_coding	-	CCDS36374.1	1	95	0	3.16	19.5	90	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020738	Sumo2	ENSMUST00000050672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020738	Sumo2	ENSMUST00000140844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020738	Sumo2	ENSMUST00000121185	ENSMUSP00000112594	TRANSLATION	protein_coding	-	-	3	52	0	1.83	0	54.4	0	-4,-7	-	-	6.966	MINOR
ENSMUSG00000020738	Sumo2	ENSMUST00000118155	ENSMUSP00000113108	TRANSLATION	protein_coding	-	-	2	71	0	2.41	1.2	35.7	0	-4,-5	-	-	6.926	MINOR
ENSMUSG00000020738	Sumo2	ENSMUST00000117589	ENSMUSP00000113883	TRANSLATION	protein_coding	-	-	3	52	0	1.83	0	54.4	0	-4,-7	-	-	6.966	MINOR
ENSMUSG00000020738	Sumo2	ENSMUST00000021084	ENSMUSP00000021084	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	1.66	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014351	Gip	ENSMUST00000103156	ENSMUSP00000099445	TRANSLATION	protein_coding	-	CCDS25287.1	5	144	0	1.6	1.5	39.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000014351	Gip	ENSMUST00000103157	ENSMUSP00000099446	TRANSLATION	protein_coding	-	CCDS25287.1	1	144	0	1.6	1.5	39.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020873	Slc35b1	ENSMUST00000021243	ENSMUSP00000021243	TRANSLATION	protein_coding	-	CCDS25277.1	1	322	0	0	1.5	189.6	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020873	Slc35b1	ENSMUST00000131193	ENSMUSP00000125307	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000020873	Slc35b1	ENSMUST00000141284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020873	Slc35b1	ENSMUST00000146556	ENSMUSP00000125597	TRANSLATION	protein_coding	stop	-	3	153	0	0	0	70.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000020873	Slc35b1	ENSMUST00000143090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000110170	St6galnac2	ENSMUST00000144398	ENSMUSP00000147566	TRANSLATION	protein_coding	-	-	1	289	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000053797	Krt16	ENSMUST00000007280	ENSMUSP00000007280	TRANSLATION	protein_coding	-	CCDS25414.1	1	469	0	3.96	0.5	384.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000018395	Kif3a	ENSMUST00000132496	ENSMUSP00000115161	TRANSLATION	protein_coding	stop	-	5	178	10	3.08	0	159.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018395	Kif3a	ENSMUST00000130037	ENSMUSP00000116509	TRANSLATION	protein_coding	start	-	3	185	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018395	Kif3a	ENSMUST00000057330	ENSMUSP00000056197	TRANSLATION	protein_coding	-	CCDS70185.1	1	698	11	7.15	7.5	402.5	0	-4,-5	-	-	20.499	ALTERNATIVE:1
ENSMUSG00000018395	Kif3a	ENSMUST00000132653	ENSMUSP00000120388	TRANSLATION	nonsense_mediated_decay	start	-	5	25	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018395	Kif3a	ENSMUST00000120613	ENSMUSP00000112782	TRANSLATION	protein_coding	-	CCDS48795.1	1	701	11	7.15	7.5	402.5	0	-4,-5	-	-	20.499	PRINCIPAL:3
ENSMUSG00000018395	Kif3a	ENSMUST00000118353	ENSMUSP00000113848	TRANSLATION	protein_coding	-	-	5	725	11	7.15	8.8	402.5	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000018395	Kif3a	ENSMUST00000140359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018395	Kif3a	ENSMUST00000173744	ENSMUSP00000133432	TRANSLATION	protein_coding	-	CCDS78947.1	1	694	11	7.15	0.5	402.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000001029	Icam2	ENSMUST00000173795	ENSMUSP00000133315	TRANSLATION	protein_coding	start/stop	-	2	180	0	3.13	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001029	Icam2	ENSMUST00000141146	ENSMUSP00000118043	TRANSLATION	protein_coding	stop	-	3	138	0	1.8	0	121.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000001029	Icam2	ENSMUST00000106809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001029	Icam2	ENSMUST00000106813	ENSMUSP00000102426	TRANSLATION	protein_coding	stop	-	2	162	0	3.13	0	143	0	4,-1	-	-	-1	MINOR
ENSMUSG00000001029	Icam2	ENSMUST00000001055	ENSMUSP00000001055	TRANSLATION	protein_coding	-	CCDS25555.1	1	277	0	4.13	1.5	143	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034255	Arhgap27	ENSMUST00000116102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034255	Arhgap27	ENSMUST00000041385	ENSMUSP00000039427	TRANSLATION	protein_coding	-	CCDS25517.1	1	670	5	9.1	1.5	272.6	0	-4,-2	-	-	15.146	MINOR
ENSMUSG00000034255	Arhgap27	ENSMUST00000136491	ENSMUSP00000128051	TRANSLATION	protein_coding	stop	-	3	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034255	Arhgap27	ENSMUST00000144194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034255	Arhgap27	ENSMUST00000139830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034255	Arhgap27	ENSMUST00000163250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034255	Arhgap27	ENSMUST00000107023	ENSMUSP00000102638	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	38	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034255	Arhgap27	ENSMUST00000107024	ENSMUSP00000102639	TRANSLATION	protein_coding	-	CCDS56815.1	5	869	5	9.1	1.5	303.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000034255	Arhgap27	ENSMUST00000124490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034255	Arhgap27	ENSMUST00000092557	ENSMUSP00000102637	TRANSLATION	protein_coding	-	CCDS36350.1	2	243	0	0	0.5	30.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034255	Arhgap27	ENSMUST00000150122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025132	Arhgdia	ENSMUST00000067936	ENSMUSP00000063714	TRANSLATION	protein_coding	-	CCDS25743.1	1	204	0	4.25	21.5	273.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025132	Arhgdia	ENSMUST00000106197	ENSMUSP00000101803	TRANSLATION	protein_coding	-	CCDS25743.1	1	204	0	4.25	21.5	273.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020706	Ftsj3	ENSMUST00000143884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020706	Ftsj3	ENSMUST00000143729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020706	Ftsj3	ENSMUST00000021048	ENSMUSP00000021048	TRANSLATION	protein_coding	-	CCDS25552.1	1	838	17	3.44	0.5	586.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020706	Ftsj3	ENSMUST00000126938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020706	Ftsj3	ENSMUST00000127803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020706	Ftsj3	ENSMUST00000154635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000320	Alox12	ENSMUST00000108574	ENSMUSP00000104214	TRANSLATION	protein_coding	-	-	1	390	2	7.75	0	74.8	0	-1,-1	-	-	8	MINOR
ENSMUSG00000000320	Alox12	ENSMUST00000000329	ENSMUSP00000000329	TRANSLATION	protein_coding	-	CCDS24942.1	1	663	5	13.5	7.5	74.8	0	-1,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000034341	Wbp2	ENSMUST00000074628	ENSMUSP00000074204	TRANSLATION	protein_coding	-	CCDS25657.1	1	261	0	0	7.5	55.9	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000034341	Wbp2	ENSMUST00000145278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034341	Wbp2	ENSMUST00000129532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034341	Wbp2	ENSMUST00000146339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034341	Wbp2	ENSMUST00000106444	ENSMUSP00000102052	TRANSLATION	protein_coding	-	CCDS83934.1	2	216	0	0	6.3	55.9	0	-4,-5	-	-	8.445	ALTERNATIVE:1
ENSMUSG00000057897	Camk2b	ENSMUST00000101585	ENSMUSP00000099119	TRANSLATION	protein_coding	-	-	5	518	18	13.91	2.4	447.3	1	-4,-5	-	-	17.798	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000154197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057897	Camk2b	ENSMUST00000002817	ENSMUSP00000002817	TRANSLATION	protein_coding	-	-	5	503	18	13.565	14.1	447.3	1	-4,-5	-	-	20.68	ALTERNATIVE:1
ENSMUSG00000057897	Camk2b	ENSMUST00000101586	ENSMUSP00000099120	TRANSLATION	protein_coding	-	-	5	518	18	13.865	14.1	447.3	1	-4,-5	-	-	21.28	PRINCIPAL:5
ENSMUSG00000057897	Camk2b	ENSMUST00000093355	ENSMUSP00000091046	TRANSLATION	protein_coding	-	-	5	589	18	13.565	1	447.3	1	-4,-5	-	-	16.68	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000109815	ENSMUSP00000105440	TRANSLATION	protein_coding	-	CCDS24411.1	5	542	18	14.225	7.6	447.3	1	-4,-5	-	-	20.016	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000090443	ENSMUSP00000087925	TRANSLATION	protein_coding	-	CCDS48748.1	1	545	18	13.565	0.5	447.3	1	-4,-5	-	-	16.68	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000129098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057897	Camk2b	ENSMUST00000123391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057897	Camk2b	ENSMUST00000066431	ENSMUSP00000065101	TRANSLATION	protein_coding	-	-	5	479	18	13.25	13.1	447.3	1	-4,-5	-	-	19.746	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000130427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057897	Camk2b	ENSMUST00000109812	ENSMUSP00000105437	TRANSLATION	protein_coding	-	CCDS48749.1	1	529	18	13.7	0.5	429.6	0	-4,-5	-	-	15.888	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000019133	ENSMUSP00000019133	TRANSLATION	protein_coding	-	-	5	666	18	14.225	3.9	447.3	1	-4,-5	-	-	18.884	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000109813	ENSMUSP00000105438	TRANSLATION	protein_coding	-	CCDS24411.1	1	542	18	14.225	7.6	447.3	1	-4,-5	-	-	20.016	MINOR
ENSMUSG00000057897	Camk2b	ENSMUST00000155755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020747	Tmem94	ENSMUST00000134948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020747	Tmem94	ENSMUST00000141871	ENSMUSP00000118396	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000020747	Tmem94	ENSMUST00000103034	ENSMUSP00000099323	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000020747	Tmem94	ENSMUST00000239299	ENSMUSP00000159201	TRANSLATION	protein_coding	-	-	-	1371	1	0	5.3	0	16	-4,-5	-	-	1.896	MINOR
ENSMUSG00000020747	Tmem94	ENSMUST00000136720	ENSMUSP00000122111	TRANSLATION	protein_coding	stop	-	2	90	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000020747	Tmem94	ENSMUST00000093912	ENSMUSP00000091440	TRANSLATION	protein_coding	-	CCDS25646.1	1	1360	1	0	7.8	0	16	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000020747	Tmem94	ENSMUST00000103033	ENSMUSP00000099322	TRANSLATION	protein_coding	-	CCDS25646.1	2	1360	1	0	7.8	0	16	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000020747	Tmem94	ENSMUST00000125918	ENSMUSP00000116666	TRANSLATION	protein_coding	start/stop	-	3	299	1	0	0	0	2	-3,-6	-	-	-1	MINOR
ENSMUSG00000043485	Krt34	ENSMUST00000056362	ENSMUSP00000056622	TRANSLATION	protein_coding	-	CCDS25404.1	1	392	0	4.26	2.7	360.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000018973	Hoxb1	ENSMUST00000019117	ENSMUSP00000019117	TRANSLATION	protein_coding	-	CCDS25300.1	1	297	0	1.2	6.4	76.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000018973	Hoxb1	ENSMUST00000123805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040620	Dhx33	ENSMUST00000179635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040620	Dhx33	ENSMUST00000178218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040620	Dhx33	ENSMUST00000155044	ENSMUSP00000136782	TRANSLATION	nonsense_mediated_decay	start	-	3	47	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000040620	Dhx33	ENSMUST00000146203	ENSMUSP00000136913	TRANSLATION	nonsense_mediated_decay	start	-	1	106	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040620	Dhx33	ENSMUST00000178111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040620	Dhx33	ENSMUST00000124464	ENSMUSP00000136051	TRANSLATION	protein_coding	-	-	5	474	1	6.92	0	139.4	0	-4,-7	-	-	2.01	MINOR
ENSMUSG00000040620	Dhx33	ENSMUST00000123860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040620	Dhx33	ENSMUST00000108527	ENSMUSP00000104167	TRANSLATION	protein_coding	-	CCDS24971.1	1	698	9	12.95	1.5	217	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000040620	Dhx33	ENSMUST00000049048	ENSMUSP00000038018	TRANSLATION	nonsense_mediated_decay	start	-	5	82	1	0.42	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000087512	Ccdc201	ENSMUST00000122910	ENSMUSP00000147806	TRANSLATION	protein_coding	-	-	5	206	0	0	1	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000060765	Olfr325	ENSMUST00000203418	ENSMUSP00000145386	TRANSLATION	protein_coding	-	CCDS48806.1	3	326	0	0.42	0.5	156.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060765	Olfr325	ENSMUST00000169428	ENSMUSP00000131257	TRANSLATION	protein_coding	-	CCDS48806.1	-	326	0	0.42	0.5	156.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020472	Zkscan17	ENSMUST00000129941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020472	Zkscan17	ENSMUST00000139093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020472	Zkscan17	ENSMUST00000134522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020472	Zkscan17	ENSMUST00000101150	ENSMUSP00000098709	TRANSLATION	protein_coding	-	CCDS70197.1	1	429	18	0.48	1.5	102.1	0	-4,-5	-	-	7.944	MINOR
ENSMUSG00000020472	Zkscan17	ENSMUST00000013262	ENSMUSP00000013262	TRANSLATION	protein_coding	-	CCDS24770.1	1	585	18	1.48	0.5	234.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020472	Zkscan17	ENSMUST00000139707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069911	Insyn2b	ENSMUST00000093192	ENSMUSP00000090883	TRANSLATION	protein_coding	-	CCDS36127.1	1	535	0	0	2.7	557.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000069911	Insyn2b	ENSMUST00000165963	ENSMUSP00000129183	TRANSLATION	protein_coding	-	CCDS36127.1	5	535	0	0	2.7	557.8	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000023723	Mrps23	ENSMUST00000118784	ENSMUSP00000113512	TRANSLATION	protein_coding	-	CCDS70279.1	1	158	0	3.35	1.5	136.9	0	-4,-6	-	-	9.078	MINOR
ENSMUSG00000023723	Mrps23	ENSMUST00000144070	ENSMUSP00000122963	TRANSLATION	protein_coding	start	-	2	120	0	2.35	0.5	52.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023723	Mrps23	ENSMUST00000107915	ENSMUSP00000103548	TRANSLATION	protein_coding	-	-	5	100	0	2.25	0	134.2	0	-4,-2	-	-	6.72	MINOR
ENSMUSG00000023723	Mrps23	ENSMUST00000024486	ENSMUSP00000024486	TRANSLATION	protein_coding	-	CCDS25227.1	1	177	0	3.85	1.5	168.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000023723	Mrps23	ENSMUST00000139170	ENSMUSP00000117416	TRANSLATION	protein_coding	stop	-	3	121	0	2.75	0	136.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055775	Myh8	ENSMUST00000108686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055775	Myh8	ENSMUST00000019625	ENSMUSP00000019625	TRANSLATION	protein_coding	-	CCDS24857.1	1	1937	15	36.43	8.8	1540.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000055775	Myh8	ENSMUST00000139052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055775	Myh8	ENSMUST00000108685	ENSMUSP00000104325	TRANSLATION	protein_coding	-	-	5	195	7	3.24	0	158.9	0	-4,-5	-	-	0.666	MINOR
ENSMUSG00000034652	Cd300a	ENSMUST00000153245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034652	Cd300a	ENSMUST00000106582	ENSMUSP00000102192	TRANSLATION	protein_coding	-	CCDS25613.1	1	318	0	1.4	0.5	74.1	1	3,-2	-	-	11.982	PRINCIPAL:3
ENSMUSG00000034652	Cd300a	ENSMUST00000045151	ENSMUSP00000036773	TRANSLATION	protein_coding	-	CCDS83923.1	1	314	0	1.4	0.5	74.3	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000018849	Wwc1	ENSMUST00000127086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018849	Wwc1	ENSMUST00000131001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018849	Wwc1	ENSMUST00000018993	ENSMUSP00000018993	TRANSLATION	protein_coding	-	CCDS24545.1	1	1104	0	5.3	0.5	93.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038178	Slc43a2	ENSMUST00000149727	ENSMUSP00000116255	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	4	-3,-6	-	-	-1	MINOR
ENSMUSG00000038178	Slc43a2	ENSMUST00000145901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038178	Slc43a2	ENSMUST00000108433	ENSMUSP00000104071	TRANSLATION	protein_coding	-	CCDS25051.1	1	568	0	0	7.5	51.2	15	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000038178	Slc43a2	ENSMUST00000155981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038178	Slc43a2	ENSMUST00000127226	ENSMUSP00000117264	TRANSLATION	protein_coding	stop	-	5	167	0	0	0	0	8	-3,-6	-	-	-1	MINOR
ENSMUSG00000038178	Slc43a2	ENSMUST00000134112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038178	Slc43a2	ENSMUST00000169547	ENSMUSP00000126838	TRANSLATION	protein_coding	-	CCDS25051.1	1	568	0	0	7.5	51.2	15	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000038178	Slc43a2	ENSMUST00000151891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038178	Slc43a2	ENSMUST00000152775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038178	Slc43a2	ENSMUST00000042561	ENSMUSP00000046074	TRANSLATION	protein_coding	-	CCDS25051.1	1	568	0	0	7.5	51.2	15	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000038178	Slc43a2	ENSMUST00000143035	ENSMUSP00000123101	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	0	6	-3,-6	-	-	-1	MINOR
ENSMUSG00000020380	Rad50	ENSMUST00000020649	ENSMUSP00000020649	TRANSLATION	protein_coding	-	CCDS24684.1	1	1312	12	12.58	7.5	167.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020380	Rad50	ENSMUST00000128483	ENSMUSP00000120869	TRANSLATION	nonsense_mediated_decay	-	-	1	551	12	4	0	119.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020380	Rad50	ENSMUST00000124352	ENSMUSP00000119618	TRANSLATION	protein_coding	stop	-	1	657	12	6.93	0	167.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020380	Rad50	ENSMUST00000152598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020380	Rad50	ENSMUST00000126121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020732	Rab37	ENSMUST00000021076	ENSMUSP00000021076	TRANSLATION	protein_coding	-	CCDS25620.1	1	223	22	5.55	6.3	201.3	0	-4,-5	-	-	20.409	PRINCIPAL:3
ENSMUSG00000020732	Rab37	ENSMUST00000131046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020732	Rab37	ENSMUST00000067754	ENSMUSP00000065016	TRANSLATION	protein_coding	-	CCDS48979.1	1	216	22	5.465	7.6	199.3	0	-4,-5	-	-	20.712	ALTERNATIVE:1
ENSMUSG00000020732	Rab37	ENSMUST00000156383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049604	Hoxb13	ENSMUST00000062709	ENSMUSP00000056315	TRANSLATION	protein_coding	-	CCDS25291.1	1	286	0	1	7.6	159.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020521	Rnft1	ENSMUST00000020827	ENSMUSP00000020827	TRANSLATION	protein_coding	-	CCDS25200.1	1	395	8	1.2	6.3	37.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020521	Rnft1	ENSMUST00000125675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020521	Rnft1	ENSMUST00000131246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038485	Socs7	ENSMUST00000238729	ENSMUSP00000158611	TRANSLATION	protein_coding	-	-	-	648	0	2.6	0	70.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000038485	Socs7	ENSMUST00000045540	ENSMUSP00000040896	TRANSLATION	protein_coding	-	CCDS25319.1	1	579	0	2.6	5.1	70.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038485	Socs7	ENSMUST00000149212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020460	Rps27a	ENSMUST00000102844	ENSMUSP00000099908	TRANSLATION	protein_coding	-	CCDS24497.1	1	156	4	3.75	19.5	211.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020460	Rps27a	ENSMUST00000143418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020460	Rps27a	ENSMUST00000147782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020460	Rps27a	ENSMUST00000150739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020460	Rps27a	ENSMUST00000102845	ENSMUSP00000099909	TRANSLATION	protein_coding	-	CCDS24497.1	1	156	4	3.75	19.5	211.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000107677	Olfr316	ENSMUST00000203731	ENSMUSP00000145187	TRANSLATION	protein_coding	-	CCDS24743.1	-	306	0	0.42	1.5	154.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000107677	Olfr316	ENSMUST00000215071	ENSMUSP00000151136	TRANSLATION	protein_coding	-	CCDS24743.1	5	306	0	0.42	1.5	154.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000017453	Pipox	ENSMUST00000155401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017453	Pipox	ENSMUST00000151383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017453	Pipox	ENSMUST00000017597	ENSMUSP00000017597	TRANSLATION	protein_coding	-	CCDS25086.1	1	390	32	5.71	7.5	168.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020357	Flt4	ENSMUST00000020617	ENSMUSP00000020617	TRANSLATION	protein_coding	-	CCDS24618.1	1	1363	21	22.88	1.5	455.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020357	Flt4	ENSMUST00000152253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075570	Krt26	ENSMUST00000100482	ENSMUSP00000098051	TRANSLATION	protein_coding	-	CCDS25378.1	1	462	0	3.67	1.5	305.8	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000075570	Krt26	ENSMUST00000148770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058755	Osm	ENSMUST00000131764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058755	Osm	ENSMUST00000075221	ENSMUSP00000074708	TRANSLATION	protein_coding	-	CCDS24382.1	1	263	0	1.36	0.5	240.1	0	4,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000006058	Snf8	ENSMUST00000150946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006058	Snf8	ENSMUST00000156394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006058	Snf8	ENSMUST00000145749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006058	Snf8	ENSMUST00000107700	ENSMUSP00000103328	TRANSLATION	protein_coding	-	-	2	233	0	5.75	0.5	209.3	0	-4,-6	-	-	8.274	MINOR
ENSMUSG00000006058	Snf8	ENSMUST00000006217	ENSMUSP00000006217	TRANSLATION	protein_coding	-	CCDS25288.1	1	258	0	6.5	14.1	246.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000006058	Snf8	ENSMUST00000156524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038615	Nfe2l1	ENSMUST00000135836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038615	Nfe2l1	ENSMUST00000167110	ENSMUSP00000127804	TRANSLATION	protein_coding	-	CCDS48894.1	2	583	0	1.4	1.5	63.5	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000038615	Nfe2l1	ENSMUST00000134951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038615	Nfe2l1	ENSMUST00000081775	ENSMUSP00000080467	TRANSLATION	protein_coding	-	CCDS25304.1	1	741	0	1.4	3.9	63.5	0	-3,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000038615	Nfe2l1	ENSMUST00000107659	ENSMUSP00000103286	TRANSLATION	protein_coding	-	-	1	742	0	1.4	0	61	0	-3,-5	-	-	11.766	MINOR
ENSMUSG00000038615	Nfe2l1	ENSMUST00000169828	ENSMUSP00000131585	TRANSLATION	protein_coding	-	CCDS48893.1	2	453	0	0.6	0.5	63.5	0	-4,-5	-	-	8.574	MINOR
ENSMUSG00000038615	Nfe2l1	ENSMUST00000107658	ENSMUSP00000103285	TRANSLATION	protein_coding	-	CCDS25304.1	1	741	0	1.4	3.9	63.5	0	-3,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000038615	Nfe2l1	ENSMUST00000140138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038615	Nfe2l1	ENSMUST00000126949	ENSMUSP00000120512	TRANSLATION	protein_coding	stop	-	2	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038615	Nfe2l1	ENSMUST00000107657	ENSMUSP00000103284	TRANSLATION	protein_coding	-	CCDS25304.1	5	741	0	1.4	3.9	63.5	0	-3,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000038615	Nfe2l1	ENSMUST00000142065	ENSMUSP00000121423	TRANSLATION	protein_coding	stop	-	2	152	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038615	Nfe2l1	ENSMUST00000167149	ENSMUSP00000128527	TRANSLATION	protein_coding	-	CCDS25304.1	1	741	0	1.4	3.9	63.5	0	-3,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000041920	Slc16a6	ENSMUST00000129901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041920	Slc16a6	ENSMUST00000032206	ENSMUSP00000032206	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000041920	Slc16a6	ENSMUST00000070152	ENSMUSP00000065628	TRANSLATION	protein_coding	-	CCDS25580.1	1	607	0	0	0.5	119.8	19	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000041920	Slc16a6	ENSMUST00000070872	ENSMUSP00000067423	TRANSLATION	protein_coding	-	CCDS36360.1	1	523	0	0	2.7	119.8	19	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000041920	Slc16a6	ENSMUST00000168740	ENSMUSP00000125950	TRANSLATION	protein_coding	stop	-	2	141	0	0	0	0	7	-4,-1	-	-	-1	MINOR
ENSMUSG00000025169	Ogfod3	ENSMUST00000026169	ENSMUSP00000026169	TRANSLATION	protein_coding	-	CCDS25770.1	1	315	3	0	2.7	38.7	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000003581	Rnf215	ENSMUST00000124670	ENSMUSP00000114532	TRANSLATION	protein_coding	start/stop	-	5	148	0	0	0	0	0	-1,-2	-	-	-1	MINOR
ENSMUSG00000003581	Rnf215	ENSMUST00000003677	ENSMUSP00000003677	TRANSLATION	protein_coding	-	CCDS24378.1	1	379	8	1.372	1.5	40.4	1	-1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000003581	Rnf215	ENSMUST00000145705	ENSMUSP00000117540	TRANSLATION	protein_coding	stop	-	5	217	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000003581	Rnf215	ENSMUST00000127165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042032	Mat2b	ENSMUST00000137797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042032	Mat2b	ENSMUST00000040167	ENSMUSP00000048222	TRANSLATION	protein_coding	-	CCDS24547.1	1	334	38	6.33	15	293.8	0	-4,-6	-	-	21.34	PRINCIPAL:1
ENSMUSG00000042032	Mat2b	ENSMUST00000156867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042032	Mat2b	ENSMUST00000135617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042032	Mat2b	ENSMUST00000101347	ENSMUSP00000098901	TRANSLATION	protein_coding	-	CCDS56767.1	1	323	38	6.66	8.8	293.8	0	-4,-5	-	-	20.228	MINOR
ENSMUSG00000042032	Mat2b	ENSMUST00000109307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042032	Mat2b	ENSMUST00000141830	ENSMUSP00000123878	TRANSLATION	nonsense_mediated_decay	-	-	3	102	13	1	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018919	Tm4sf5	ENSMUST00000179986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018919	Tm4sf5	ENSMUST00000141924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018919	Tm4sf5	ENSMUST00000019063	ENSMUSP00000019063	TRANSLATION	protein_coding	-	CCDS24950.1	1	196	0	0	7.5	230.3	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000041073	Nacad	ENSMUST00000177391	ENSMUSP00000135338	TRANSLATION	nonsense_mediated_decay	start	-	5	258	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041073	Nacad	ENSMUST00000045713	ENSMUSP00000049490	TRANSLATION	protein_coding	-	CCDS36108.1	1	1504	0	1.2	0.5	76.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041073	Nacad	ENSMUST00000177050	ENSMUSP00000134974	TRANSLATION	nonsense_mediated_decay	start	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072620	Slfn2	ENSMUST00000038038	ENSMUSP00000035562	TRANSLATION	protein_coding	-	CCDS25156.1	1	378	0	0	0.5	37.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053519	Kcnip1	ENSMUST00000065970	ENSMUSP00000069063	TRANSLATION	protein_coding	-	CCDS24537.1	1	216	10	6.83	19.5	82.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000053519	Kcnip1	ENSMUST00000135034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053519	Kcnip1	ENSMUST00000238436	ENSMUSP00000158813	TRANSLATION	protein_coding	-	-	-	232	10	6.68	12.1	82.9	0	-4,-7	-	-	20.1	MINOR
ENSMUSG00000053519	Kcnip1	ENSMUST00000238903	ENSMUSP00000158966	TRANSLATION	protein_coding	-	-	-	225	10	6.5	14.1	82.9	0	-4,-1	-	-	20.172	MINOR
ENSMUSG00000053519	Kcnip1	ENSMUST00000154760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053519	Kcnip1	ENSMUST00000109340	ENSMUSP00000104964	TRANSLATION	protein_coding	-	CCDS56766.1	1	227	10	6.83	10.4	82.9	0	-4,-2	-	-	20.032	MINOR
ENSMUSG00000053519	Kcnip1	ENSMUST00000101368	ENSMUSP00000098919	TRANSLATION	protein_coding	-	CCDS70160.1	2	188	10	5.75	8.6	82.9	0	-4,-5	-	-	17.484	MINOR
ENSMUSG00000089722	Cd300ld5	ENSMUST00000100239	ENSMUSP00000097810	TRANSLATION	protein_coding	-	CCDS36369.1	1	245	0	1	0.5	52.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000057098	Ebf1	ENSMUST00000138452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057098	Ebf1	ENSMUST00000081265	ENSMUSP00000080020	TRANSLATION	protein_coding	-	CCDS24566.1	1	591	4	11.264	18.2	635.3	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000057098	Ebf1	ENSMUST00000101326	ENSMUSP00000099857	TRANSLATION	protein_coding	-	CCDS70165.1	1	592	4	11.264	18.2	635.3	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000057098	Ebf1	ENSMUST00000140822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057098	Ebf1	ENSMUST00000135993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057098	Ebf1	ENSMUST00000149997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057098	Ebf1	ENSMUST00000109268	ENSMUSP00000104891	TRANSLATION	protein_coding	-	-	5	584	4	11	13.7	635.3	0	-4,-5	-	-	18.424	MINOR
ENSMUSG00000000751	Rpa1	ENSMUST00000154894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000751	Rpa1	ENSMUST00000000767	ENSMUSP00000000767	TRANSLATION	protein_coding	-	CCDS48847.1	1	644	5	13.505	0.5	432.4	0	-4,-5	-	-	15.17	MINOR
ENSMUSG00000000751	Rpa1	ENSMUST00000135770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000751	Rpa1	ENSMUST00000149365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000751	Rpa1	ENSMUST00000092907	ENSMUSP00000090585	TRANSLATION	protein_coding	-	CCDS25044.1	1	623	5	13.88	0.5	450.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000001552	Jup	ENSMUST00000151476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000001592	ENSMUSP00000001592	TRANSLATION	protein_coding	-	CCDS25420.1	1	745	0	10.19	8.8	92.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001552	Jup	ENSMUST00000124659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000123903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000152774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000107403	ENSMUSP00000103026	TRANSLATION	protein_coding	-	CCDS25420.1	5	745	0	10.19	8.8	92.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001552	Jup	ENSMUST00000149798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000155746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001552	Jup	ENSMUST00000128268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050288	Fzd2	ENSMUST00000057893	ENSMUSP00000091463	TRANSLATION	protein_coding	-	CCDS25501.1	-	570	0	0.6	1.5	590.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020516	Rps6kb1	ENSMUST00000058286	ENSMUSP00000053188	TRANSLATION	protein_coding	-	CCDS25201.1	1	316	15	3.646	0.5	67.9	0	-4,-7	-	-	3.336	MINOR
ENSMUSG00000020516	Rps6kb1	ENSMUST00000151748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020516	Rps6kb1	ENSMUST00000131194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020516	Rps6kb1	ENSMUST00000020824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020516	Rps6kb1	ENSMUST00000149392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020516	Rps6kb1	ENSMUST00000154617	ENSMUSP00000119715	TRANSLATION	protein_coding	-	CCDS48875.1	1	525	19	10.746	8.8	274.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020516	Rps6kb1	ENSMUST00000138810	ENSMUSP00000122756	TRANSLATION	protein_coding	stop	-	3	74	9	2.014	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038845	Phb	ENSMUST00000125172	ENSMUSP00000119603	TRANSLATION	protein_coding	-	CCDS25280.1	1	272	0	0	17.5	95.8	0	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000038845	Phb	ENSMUST00000123071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038845	Phb	ENSMUST00000123001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038845	Phb	ENSMUST00000036374	ENSMUSP00000047536	TRANSLATION	protein_coding	stop	-	5	207	0	0	0	95.8	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000038845	Phb	ENSMUST00000127031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018848	Rars	ENSMUST00000166122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018848	Rars	ENSMUST00000018992	ENSMUSP00000018992	TRANSLATION	protein_coding	-	CCDS24544.1	1	660	11	14.5	8.3	735.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018848	Rars	ENSMUST00000143205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018848	Rars	ENSMUST00000165817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018848	Rars	ENSMUST00000137815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017195	Zpbp2	ENSMUST00000107513	ENSMUSP00000103137	TRANSLATION	protein_coding	-	-	5	304	0	0	0	298.4	0	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000017195	Zpbp2	ENSMUST00000107511	ENSMUSP00000103135	TRANSLATION	protein_coding	-	CCDS48903.1	1	272	0	0	1.5	298.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000017195	Zpbp2	ENSMUST00000081033	ENSMUSP00000079822	TRANSLATION	protein_coding	-	CCDS25354.1	1	253	0	0	2.7	211.9	0	4,-1	-	-	0.81	MINOR
ENSMUSG00000017195	Zpbp2	ENSMUST00000126236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017195	Zpbp2	ENSMUST00000017339	ENSMUSP00000017339	TRANSLATION	protein_coding	-	CCDS25353.1	1	326	0	0	2.7	298.4	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000017195	Zpbp2	ENSMUST00000107509	ENSMUSP00000103133	TRANSLATION	protein_coding	-	CCDS48903.1	1	272	0	0	1.5	298.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095187	Olfr1381	ENSMUST00000213256	ENSMUSP00000149881	TRANSLATION	protein_coding	-	CCDS24616.1	5	311	0	0.36	5.1	162.1	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095187	Olfr1381	ENSMUST00000167248	ENSMUSP00000126003	TRANSLATION	protein_coding	-	CCDS24616.1	-	311	0	0.36	5.1	162.1	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000109737	Gm39566	ENSMUST00000210714	ENSMUSP00000148194	TRANSLATION	protein_coding	-	-	5	1251	0	0	0.5	33.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000056579	Tug1	ENSMUST00000132077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056579	Tug1	ENSMUST00000144852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056579	Tug1	ENSMUST00000193809	ENSMUSP00000159371	TRANSLATION	protein_coding	start	-	-	142	0	0	0	0	0	-1,2	-	-	-1	PRINCIPAL:1
ENSMUSG00000056579	Tug1	ENSMUST00000226724	-	NO_TRANSLATION	antisense
ENSMUSG00000056579	Tug1	ENSMUST00000226545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056579	Tug1	ENSMUST00000227137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056579	Tug1	ENSMUST00000182330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056579	Tug1	ENSMUST00000153313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036819	Jmjd4	ENSMUST00000147163	ENSMUSP00000123531	TRANSLATION	nonsense_mediated_decay	-	-	1	200	4	1.18	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036819	Jmjd4	ENSMUST00000126158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036819	Jmjd4	ENSMUST00000108777	ENSMUSP00000104407	TRANSLATION	protein_coding	-	CCDS24768.1	1	427	12	3.344	1.5	70	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036819	Jmjd4	ENSMUST00000045279	ENSMUSP00000043473	TRANSLATION	protein_coding	-	CCDS56777.1	1	415	10	2.844	0.5	49.1	0	-4,-6	-	-	13.872	MINOR
ENSMUSG00000020708	Psmc5	ENSMUST00000133131	ENSMUSP00000138057	TRANSLATION	nonsense_mediated_decay	-	-	2	348	10	6.83	0	145.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020708	Psmc5	ENSMUST00000021049	ENSMUSP00000021049	TRANSLATION	protein_coding	-	CCDS25553.1	1	406	15	9.08	13.3	145.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052234	Epx	ENSMUST00000125590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052234	Epx	ENSMUST00000049768	ENSMUSP00000050497	TRANSLATION	protein_coding	-	CCDS25220.1	1	716	25	10.75	3.9	605.6	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000049336	Tenm2	ENSMUST00000146113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049336	Tenm2	ENSMUST00000102801	ENSMUSP00000099865	TRANSLATION	protein_coding	-	CCDS24546.1	5	2764	0	3.8	6.4	682.2	0	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000049336	Tenm2	ENSMUST00000157030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049336	Tenm2	ENSMUST00000155147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049336	Tenm2	ENSMUST00000149787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049336	Tenm2	ENSMUST00000128501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049336	Tenm2	ENSMUST00000163524	ENSMUSP00000129951	TRANSLATION	protein_coding	-	CCDS24546.1	5	2764	0	3.8	6.4	682.2	0	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000049336	Tenm2	ENSMUST00000057207	ENSMUSP00000052014	TRANSLATION	protein_coding	-	-	5	2765	0	3.8	6.4	682.2	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000025150	Cbr2	ENSMUST00000026148	ENSMUSP00000026148	TRANSLATION	protein_coding	-	CCDS25756.1	1	244	29	6.74	6.4	181.9	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000025150	Cbr2	ENSMUST00000154565	ENSMUSP00000117739	TRANSLATION	protein_coding	start/stop	-	5	154	20	4.58	0	78.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025150	Cbr2	ENSMUST00000154479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025150	Cbr2	ENSMUST00000149450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020491	2810021J22Rik	ENSMUST00000073924	ENSMUSP00000073579	TRANSLATION	protein_coding	-	CCDS24751.1	1	539	28	1.6	0.5	206.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020491	2810021J22Rik	ENSMUST00000132570	ENSMUSP00000120692	TRANSLATION	protein_coding	stop	-	3	68	0	1	0	75.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020912	Krt12	ENSMUST00000017741	ENSMUSP00000017741	TRANSLATION	protein_coding	-	CCDS36306.1	1	487	0	3.61	0.5	360.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041958	Pigs	ENSMUST00000048073	ENSMUSP00000044871	TRANSLATION	protein_coding	-	CCDS25100.1	1	555	0	0	7.5	474.2	0	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000011256	Adam19	ENSMUST00000151565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011256	Adam19	ENSMUST00000011400	ENSMUSP00000011400	TRANSLATION	protein_coding	-	CCDS24571.1	1	920	18	9.23	1.5	495.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000011256	Adam19	ENSMUST00000153410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011256	Adam19	ENSMUST00000137014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020829	Slc46a1	ENSMUST00000001126	ENSMUSP00000001126	TRANSLATION	protein_coding	-	CCDS25104.1	1	459	0	0	1.5	51	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020829	Slc46a1	ENSMUST00000146431	ENSMUSP00000119800	TRANSLATION	nonsense_mediated_decay	-	-	3	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020829	Slc46a1	ENSMUST00000180786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035085	1700020L24Rik	ENSMUST00000188702	ENSMUSP00000140664	TRANSLATION	protein_coding	start	-	3	111	0	0	0	140.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035085	1700020L24Rik	ENSMUST00000037378	ENSMUSP00000042098	TRANSLATION	protein_coding	-	CCDS25165.1	1	189	2	0	1.5	285.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000020176	Grb10	ENSMUST00000143386	ENSMUSP00000118350	TRANSLATION	protein_coding	stop	-	3	171	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020176	Grb10	ENSMUST00000124587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020176	Grb10	ENSMUST00000093321	ENSMUSP00000091011	TRANSLATION	protein_coding	-	CCDS24440.1	1	596	0	10.795	0.5	225.4	0	-4,-5	-	-	11.922	PRINCIPAL:3
ENSMUSG00000020176	Grb10	ENSMUST00000142877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020176	Grb10	ENSMUST00000109653	ENSMUSP00000105280	TRANSLATION	protein_coding	-	-	5	550	0	9.795	0	189.7	0	-4,-5	-	-	7.782	MINOR
ENSMUSG00000020176	Grb10	ENSMUST00000109654	ENSMUSP00000105281	TRANSLATION	protein_coding	-	CCDS48754.1	1	541	0	10.795	0.5	226.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020176	Grb10	ENSMUST00000148254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020176	Grb10	ENSMUST00000143915	ENSMUSP00000115160	TRANSLATION	protein_coding	stop	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020176	Grb10	ENSMUST00000150972	ENSMUSP00000119344	TRANSLATION	protein_coding	stop	-	5	116	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020419	Hormad2	ENSMUST00000149443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020419	Hormad2	ENSMUST00000109948	ENSMUSP00000105574	TRANSLATION	protein_coding	-	CCDS36096.1	5	306	0	1.984	1.7	204.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020419	Hormad2	ENSMUST00000109949	ENSMUSP00000105575	TRANSLATION	protein_coding	-	CCDS36096.1	1	306	0	1.984	1.7	204.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020419	Hormad2	ENSMUST00000130174	ENSMUSP00000121715	TRANSLATION	protein_coding	stop	-	3	105	0	1	0	82.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020419	Hormad2	ENSMUST00000124249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020419	Hormad2	ENSMUST00000020689	ENSMUSP00000020689	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0.6	0	39.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034427	Myo15b	ENSMUST00000151507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034427	Myo15b	ENSMUST00000167507	ENSMUSP00000129226	TRANSLATION	protein_coding	start	-	5	511	0	5.68	0	135.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034427	Myo15b	ENSMUST00000141947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034427	Myo15b	ENSMUST00000093911	ENSMUSP00000091439	TRANSLATION	protein_coding	-	-	5	3033	15	27.895	0	762.3	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034427	Myo15b	ENSMUST00000040703	ENSMUSP00000048072	TRANSLATION	protein_coding	start	-	1	868	0	4.96	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034427	Myo15b	ENSMUST00000222123	ENSMUSP00000152405	TRANSLATION	protein_coding	-	-	5	1611	0	12.175	0	252.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034427	Myo15b	ENSMUST00000132447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034427	Myo15b	ENSMUST00000125835	ENSMUSP00000144423	TRANSLATION	protein_coding	start	-	3	165	0	2.92	0	39.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044041	Krt13	ENSMUST00000128934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044041	Krt13	ENSMUST00000007275	ENSMUSP00000007275	TRANSLATION	protein_coding	-	CCDS25409.1	1	437	0	4.505	0.5	396.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044041	Krt13	ENSMUST00000134282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020736	Nt5c	ENSMUST00000124778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020736	Nt5c	ENSMUST00000106530	ENSMUSP00000102140	TRANSLATION	protein_coding	-	-	3	194	6	3.948	0.5	78.3	0	-4,-6	-	-	14.538	MINOR
ENSMUSG00000020736	Nt5c	ENSMUST00000021082	ENSMUSP00000021082	TRANSLATION	protein_coding	-	CCDS25637.1	1	200	6	5.25	4.7	91.4	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000020736	Nt5c	ENSMUST00000125940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020736	Nt5c	ENSMUST00000130668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101750	Olfr1392	ENSMUST00000214170	ENSMUSP00000149127	TRANSLATION	protein_coding	-	CCDS24604.1	5	311	0	0.24	7.6	152.5	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101750	Olfr1392	ENSMUST00000215861	ENSMUSP00000150526	TRANSLATION	protein_coding	-	CCDS24604.1	5	311	0	0.24	7.6	152.5	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101750	Olfr1392	ENSMUST00000214516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101750	Olfr1392	ENSMUST00000217275	ENSMUSP00000149746	TRANSLATION	protein_coding	-	CCDS24604.1	5	311	0	0.24	7.6	152.5	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101750	Olfr1392	ENSMUST00000214598	ENSMUSP00000150516	TRANSLATION	protein_coding	-	CCDS24604.1	5	311	0	0.24	7.6	152.5	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101750	Olfr1392	ENSMUST00000189851	ENSMUSP00000140904	TRANSLATION	protein_coding	-	CCDS24604.1	-	311	0	0.24	7.6	152.5	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000101750	Olfr1392	ENSMUST00000213684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035198	Tubg1	ENSMUST00000137844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035198	Tubg1	ENSMUST00000043680	ENSMUSP00000048036	TRANSLATION	protein_coding	-	CCDS25451.1	1	451	16	9.75	16.3	393	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020758	Itgb4	ENSMUST00000106460	ENSMUSP00000102068	TRANSLATION	protein_coding	-	-	5	1806	12	22.31	1.7	760.8	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020758	Itgb4	ENSMUST00000130286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020758	Itgb4	ENSMUST00000150129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020758	Itgb4	ENSMUST00000106458	ENSMUSP00000102066	TRANSLATION	protein_coding	-	-	5	1818	12	22.31	0.5	760.8	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020758	Itgb4	ENSMUST00000106461	ENSMUSP00000102069	TRANSLATION	protein_coding	-	-	5	1818	12	22.31	0.5	760.8	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020758	Itgb4	ENSMUST00000169928	ENSMUSP00000127604	TRANSLATION	protein_coding	-	CCDS36376.1	5	1802	12	22.25	0.5	757.9	1	3,-2	-	-	17.706	PRINCIPAL:2
ENSMUSG00000020758	Itgb4	ENSMUST00000127523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020758	Itgb4	ENSMUST00000021107	ENSMUSP00000021107	TRANSLATION	protein_coding	-	CCDS36376.1	5	1802	12	22.25	0.5	757.9	1	3,-2	-	-	17.706	PRINCIPAL:2
ENSMUSG00000020758	Itgb4	ENSMUST00000151691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020758	Itgb4	ENSMUST00000068981	ENSMUSP00000070811	TRANSLATION	protein_coding	-	-	5	1753	12	22.31	1.7	760.8	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000020604	Arsg	ENSMUST00000106696	ENSMUSP00000102307	TRANSLATION	protein_coding	-	CCDS48971.1	1	202	2	3.06	0.5	122	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020604	Arsg	ENSMUST00000136336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020604	Arsg	ENSMUST00000106697	ENSMUSP00000102308	TRANSLATION	protein_coding	-	CCDS25581.1	5	525	11	7.44	5.1	314.4	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000020604	Arsg	ENSMUST00000152252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020604	Arsg	ENSMUST00000020928	ENSMUSP00000020928	TRANSLATION	protein_coding	-	CCDS25581.1	1	525	11	7.44	5.1	314.4	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000049612	Omg	ENSMUST00000164465	ENSMUSP00000132918	TRANSLATION	protein_coding	-	CCDS25120.2	1	443	0	0.4	6.3	92.6	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000001039	B9d1	ENSMUST00000140548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001039	B9d1	ENSMUST00000155176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001039	B9d1	ENSMUST00000102657	ENSMUSP00000099717	TRANSLATION	protein_coding	-	CCDS24815.1	1	204	0	0	7.5	183.1	0	1,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000001039	B9d1	ENSMUST00000138057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001039	B9d1	ENSMUST00000127889	ENSMUSP00000117524	TRANSLATION	protein_coding	start	-	5	118	0	0	0	67.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001039	B9d1	ENSMUST00000146562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020319	Wdpcp	ENSMUST00000131135	ENSMUSP00000120122	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	66.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020319	Wdpcp	ENSMUST00000156624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020319	Wdpcp	ENSMUST00000143608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020319	Wdpcp	ENSMUST00000020568	ENSMUSP00000020568	TRANSLATION	protein_coding	-	CCDS24467.1	1	722	0	0	0.5	912	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020319	Wdpcp	ENSMUST00000128794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020319	Wdpcp	ENSMUST00000149757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060787	Olfr464	ENSMUST00000214754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060787	Olfr464	ENSMUST00000215062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060787	Olfr464	ENSMUST00000216461	ENSMUSP00000149777	TRANSLATION	protein_coding	-	CCDS25223.1	5	313	0	0.42	8.8	142.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060787	Olfr464	ENSMUST00000074874	ENSMUSP00000074415	TRANSLATION	protein_coding	-	CCDS25223.1	-	313	0	0.42	8.8	142.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060787	Olfr464	ENSMUST00000217112	ENSMUSP00000149264	TRANSLATION	protein_coding	-	CCDS25223.1	5	313	0	0.42	8.8	142.9	5	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018569	Cldn7	ENSMUST00000151515	ENSMUSP00000137627	TRANSLATION	protein_coding	stop	-	2	107	0	2.75	0	98.2	4	2,-3	-	-	-1	MINOR
ENSMUSG00000018569	Cldn7	ENSMUST00000108597	ENSMUSP00000104238	TRANSLATION	protein_coding	-	CCDS24925.1	2	211	0	4.23	8.8	180.2	6	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000018569	Cldn7	ENSMUST00000018713	ENSMUSP00000018713	TRANSLATION	protein_coding	-	CCDS24925.1	1	211	0	4.23	8.8	180.2	6	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000018569	Cldn7	ENSMUST00000060651	ENSMUSP00000090725	TRANSLATION	protein_coding	stop	-	5	83	0	1.33	0	73	1	0,-4	-	-	-1	MINOR
ENSMUSG00000018569	Cldn7	ENSMUST00000108596	ENSMUSP00000104237	TRANSLATION	protein_coding	-	-	3	128	0	2.9	2	98.2	4	2,-3	-	-	4.806	MINOR
ENSMUSG00000020362	Cnot6	ENSMUST00000145353	ENSMUSP00000121239	TRANSLATION	protein_coding	-	CCDS70172.1	5	557	11	9.38	17.3	113	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020362	Cnot6	ENSMUST00000151090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020362	Cnot6	ENSMUST00000145424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020362	Cnot6	ENSMUST00000020624	ENSMUSP00000020624	TRANSLATION	protein_coding	-	CCDS24621.1	1	552	11	9.38	9.8	113	0	-4,-5	-	-	20.16	MINOR
ENSMUSG00000020362	Cnot6	ENSMUST00000109183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070345	Hsf5	ENSMUST00000093956	ENSMUSP00000091488	TRANSLATION	protein_coding	-	CCDS36269.1	5	624	0	0.3	1.5	56.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020692	Nle1	ENSMUST00000170815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020692	Nle1	ENSMUST00000103213	ENSMUSP00000099502	TRANSLATION	protein_coding	-	CCDS25152.1	1	485	0	10.24	2.7	270.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020692	Nle1	ENSMUST00000140318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020692	Nle1	ENSMUST00000147915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020692	Nle1	ENSMUST00000124109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020692	Nle1	ENSMUST00000126202	ENSMUSP00000130605	TRANSLATION	nonsense_mediated_decay	start	-	5	57	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020692	Nle1	ENSMUST00000167196	ENSMUSP00000128341	TRANSLATION	nonsense_mediated_decay	start	-	3	42	0	0.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000861	Bcl11a	ENSMUST00000118955	ENSMUSP00000112948	TRANSLATION	protein_coding	-	CCDS48759.1	1	191	3	0	1.8	0	0	-4,-5	-	-	0.369	MINOR
ENSMUSG00000000861	Bcl11a	ENSMUST00000124148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000861	Bcl11a	ENSMUST00000109516	ENSMUSP00000105142	TRANSLATION	protein_coding	-	CCDS48758.1	1	243	3	0	7.5	0	0	-4,-6	-	-	3	MINOR
ENSMUSG00000000861	Bcl11a	ENSMUST00000000881	ENSMUSP00000000881	TRANSLATION	protein_coding	-	CCDS24483.1	1	773	11	0	7.5	41.9	0	-4,-6	-	-	4.872	MINOR
ENSMUSG00000000861	Bcl11a	ENSMUST00000109514	ENSMUSP00000105140	TRANSLATION	protein_coding	-	CCDS56764.1	1	835	22	0.8	6.3	110.7	0	-4,-6	-	-	20.445	PRINCIPAL:1
ENSMUSG00000000861	Bcl11a	ENSMUST00000127494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039208	Metrnl	ENSMUST00000036742	ENSMUSP00000038126	TRANSLATION	protein_coding	-	CCDS25781.1	1	311	0	0	3.9	0	0	1,2	-	-	1	PRINCIPAL:2
ENSMUSG00000039208	Metrnl	ENSMUST00000106089	ENSMUSP00000101695	TRANSLATION	protein_coding	-	-	5	229	0	0	2.4	0	0	-4,-7	-	-	0.483	ALTERNATIVE:2
ENSMUSG00000039208	Metrnl	ENSMUST00000125580	ENSMUSP00000122949	TRANSLATION	protein_coding	start/stop	-	1	217	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017390	Aldoc	ENSMUST00000128032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017390	Aldoc	ENSMUST00000102478	ENSMUSP00000099536	TRANSLATION	protein_coding	-	CCDS25099.1	1	363	20	7.25	17.5	605.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017390	Aldoc	ENSMUST00000124090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017390	Aldoc	ENSMUST00000017534	ENSMUSP00000017534	TRANSLATION	protein_coding	-	CCDS25099.1	1	363	20	7.25	17.5	605.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000017390	Aldoc	ENSMUST00000148689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017390	Aldoc	ENSMUST00000156039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000044721	ENSMUSP00000044838	TRANSLATION	protein_coding	-	CCDS25443.1	1	838	0	14.4	10	1136.2	8	-4,-5	-	-	14.79	PRINCIPAL:1
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000168757	ENSMUSP00000131848	TRANSLATION	protein_coding	-	-	5	838	0	14.07	7.5	1133.2	8	-4,-5	-	-	13.116	MINOR
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000103110	ENSMUSP00000099399	TRANSLATION	protein_coding	-	CCDS56808.1	5	839	0	14.07	6.3	1139.7	8	-4,-5	-	-	13.107	MINOR
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000139619	ENSMUSP00000121247	TRANSLATION	protein_coding	stop	-	3	79	0	1.95	0	66.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000127810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000154896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000092663	ENSMUSP00000090333	TRANSLATION	protein_coding	-	CCDS56809.1	1	832	0	14.07	6.3	1133.2	8	-4,-5	-	-	12.717	MINOR
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000134919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000151554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019302	Atp6v0a1	ENSMUST00000139857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010362	Rdm1	ENSMUST00000133727	ENSMUSP00000118996	TRANSLATION	nonsense_mediated_decay	start	-	1	127	0	0	0	22.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010362	Rdm1	ENSMUST00000152484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010362	Rdm1	ENSMUST00000139037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010362	Rdm1	ENSMUST00000155222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010362	Rdm1	ENSMUST00000010506	ENSMUSP00000010506	TRANSLATION	protein_coding	-	CCDS25477.1	1	281	0	0	1.5	52.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020617	1700012B07Rik	ENSMUST00000106674	ENSMUSP00000102285	TRANSLATION	protein_coding	-	CCDS48973.1	1	276	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:4
ENSMUSG00000020617	1700012B07Rik	ENSMUST00000143578	ENSMUSP00000115395	TRANSLATION	protein_coding	stop	-	3	187	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020617	1700012B07Rik	ENSMUST00000020941	ENSMUSP00000020941	TRANSLATION	protein_coding	-	CCDS48972.1	1	263	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000049299	Trappc1	ENSMUST00000140555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049299	Trappc1	ENSMUST00000102602	ENSMUSP00000099662	TRANSLATION	protein_coding	-	CCDS24889.1	2	145	0	4.08	15.5	155.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000049299	Trappc1	ENSMUST00000060956	ENSMUSP00000050153	TRANSLATION	protein_coding	-	-	3	165	0	3.08	0	102.4	0	-4,-5	-	-	6.828	MINOR
ENSMUSG00000049299	Trappc1	ENSMUST00000102601	ENSMUSP00000099661	TRANSLATION	protein_coding	-	CCDS24889.1	1	145	0	4.08	15.5	155.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000049299	Trappc1	ENSMUST00000108662	ENSMUSP00000104302	TRANSLATION	protein_coding	-	-	2	135	0	3.75	0	131.6	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000070383	Olfr389	ENSMUST00000215418	ENSMUSP00000149734	TRANSLATION	protein_coding	-	CCDS25015.1	5	312	0	0.42	2.7	189.4	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070383	Olfr389	ENSMUST00000124927	ENSMUSP00000115639	TRANSLATION	protein_coding	-	CCDS25015.1	3	312	0	0.42	2.7	189.4	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000070383	Olfr389	ENSMUST00000122224	ENSMUSP00000113364	TRANSLATION	protein_coding	-	CCDS25015.1	2	312	0	0.42	2.7	189.4	5	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032673	Prorsd1	ENSMUST00000133103	ENSMUSP00000117933	TRANSLATION	protein_coding	-	CCDS48762.1	1	62	0	0.45	0.5	0	0	-4,-5	-	-	2.478	MINOR
ENSMUSG00000032673	Prorsd1	ENSMUST00000039900	ENSMUSP00000048099	TRANSLATION	protein_coding	-	CCDS24495.1	1	169	0	1.09	11.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000020737	Jpt1	ENSMUST00000021083	ENSMUSP00000021083	TRANSLATION	protein_coding	-	CCDS25638.1	1	154	0	0	10.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000020737	Jpt1	ENSMUST00000142238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020737	Jpt1	ENSMUST00000139980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020737	Jpt1	ENSMUST00000155399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020737	Jpt1	ENSMUST00000145104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038534	Osbpl7	ENSMUST00000142406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038534	Osbpl7	ENSMUST00000090020	ENSMUSP00000087474	TRANSLATION	protein_coding	-	-	1	837	0	5.26	1	469.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000038534	Osbpl7	ENSMUST00000168565	ENSMUSP00000126902	TRANSLATION	protein_coding	-	-	5	791	0	5.26	0.5	469.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038534	Osbpl7	ENSMUST00000142399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038534	Osbpl7	ENSMUST00000154084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038534	Osbpl7	ENSMUST00000143360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045915	Ccdc42	ENSMUST00000154294	ENSMUSP00000114381	TRANSLATION	protein_coding	-	CCDS24868.2	5	316	0	0	7.5	95.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045915	Ccdc42	ENSMUST00000063006	ENSMUSP00000057342	TRANSLATION	protein_coding	-	-	5	238	0	0	0	95.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000045915	Ccdc42	ENSMUST00000102612	ENSMUSP00000099672	TRANSLATION	protein_coding	-	-	1	169	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056158	Car10	ENSMUST00000149611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056158	Car10	ENSMUST00000107863	ENSMUSP00000103495	TRANSLATION	protein_coding	-	CCDS25244.1	1	328	2	4.92	17.3	225.8	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000056158	Car10	ENSMUST00000107858	ENSMUSP00000103490	TRANSLATION	protein_coding	-	-	1	304	2	4.56	0	193.6	0	-1,-4	-	-	11.348	MINOR
ENSMUSG00000056158	Car10	ENSMUST00000092780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056158	Car10	ENSMUST00000042943	ENSMUSP00000035585	TRANSLATION	protein_coding	-	CCDS25244.1	1	328	2	4.92	17.3	225.8	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000056158	Car10	ENSMUST00000107861	ENSMUSP00000103493	TRANSLATION	protein_coding	-	-	1	169	1	2.16	0	84	0	-1,-4	-	-	1.48	MINOR
ENSMUSG00000056158	Car10	ENSMUST00000107859	ENSMUSP00000103491	TRANSLATION	protein_coding	-	-	1	103	0	0.8	0	27.9	0	-1,-4	-	-	0	MINOR
ENSMUSG00000046605	B3gntl1	ENSMUST00000062654	ENSMUSP00000049890	TRANSLATION	protein_coding	-	-	1	260	15	2.84	0	78.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000046605	B3gntl1	ENSMUST00000067399	ENSMUSP00000068590	TRANSLATION	protein_coding	-	CCDS25780.1	1	357	15	2.84	1.5	77.7	0	-4,-6	-	-	17.91	PRINCIPAL:2
ENSMUSG00000020922	Lsm12	ENSMUST00000107156	ENSMUSP00000102774	TRANSLATION	protein_coding	-	-	5	137	0	0	0	82.7	0	-4,-6	-	-	5.802	MINOR
ENSMUSG00000020922	Lsm12	ENSMUST00000021297	ENSMUSP00000021297	TRANSLATION	protein_coding	-	CCDS25490.1	1	195	0	0	19.5	85.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020922	Lsm12	ENSMUST00000153276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020922	Lsm12	ENSMUST00000137930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020922	Lsm12	ENSMUST00000140429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096923	A730071L15Rik	ENSMUST00000181545	ENSMUSP00000137938	TRANSLATION	protein_coding	start	-	-	137	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000020448	Rnf185	ENSMUST00000077078	ENSMUSP00000076333	TRANSLATION	protein_coding	-	CCDS70127.1	1	192	8	1.284	10.8	41.1	2	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020448	Rnf185	ENSMUST00000064364	ENSMUSP00000067053	TRANSLATION	protein_coding	-	CCDS24361.1	1	228	8	1.284	0.5	41.1	2	-4,-7	-	-	18	MINOR
ENSMUSG00000020448	Rnf185	ENSMUST00000144055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014606	Slc25a11	ENSMUST00000136383	ENSMUSP00000120900	TRANSLATION	protein_coding	stop	-	3	76	0	1.4	0	61.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014606	Slc25a11	ENSMUST00000139638	ENSMUSP00000114685	TRANSLATION	protein_coding	stop	-	3	193	0	4	0	121.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014606	Slc25a11	ENSMUST00000134804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014606	Slc25a11	ENSMUST00000014750	ENSMUSP00000014750	TRANSLATION	protein_coding	-	CCDS24958.1	1	314	0	6.07	5.1	203.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000014606	Slc25a11	ENSMUST00000157076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020841	Cpd	ENSMUST00000021201	ENSMUSP00000021201	TRANSLATION	protein_coding	-	CCDS25071.1	1	1377	15	10.64	1.5	867.8	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000020841	Cpd	ENSMUST00000151584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020841	Cpd	ENSMUST00000132796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078789	Dph1	ENSMUST00000156489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078789	Dph1	ENSMUST00000148944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078789	Dph1	ENSMUST00000139958	ENSMUSP00000116537	TRANSLATION	protein_coding	stop	-	3	275	7	3.06	0	267.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078789	Dph1	ENSMUST00000044949	ENSMUSP00000042162	TRANSLATION	protein_coding	-	CCDS25042.1	1	438	9	4.21	1.5	393.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000078789	Dph1	ENSMUST00000150910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025135	Anapc11	ENSMUST00000093140	ENSMUSP00000097714	TRANSLATION	protein_coding	-	CCDS25745.1	1	84	11	2	19.5	150.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025135	Anapc11	ENSMUST00000026128	ENSMUSP00000026128	TRANSLATION	protein_coding	-	CCDS25745.1	1	84	11	2	19.5	150.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025135	Anapc11	ENSMUST00000129263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025135	Anapc11	ENSMUST00000148114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018442	Derl2	ENSMUST00000171041	ENSMUSP00000127568	TRANSLATION	protein_coding	-	CCDS70235.1	1	165	0	0	1.5	162.9	2	-3,-6	-	-	0.788	MINOR
ENSMUSG00000018442	Derl2	ENSMUST00000143850	ENSMUSP00000117052	TRANSLATION	protein_coding	-	CCDS24972.1	1	239	0	0	18.3	251.7	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000018442	Derl2	ENSMUST00000140712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018442	Derl2	ENSMUST00000131340	ENSMUSP00000135984	TRANSLATION	nonsense_mediated_decay	start	-	3	65	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000018442	Derl2	ENSMUST00000132198	ENSMUSP00000136401	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018442	Derl2	ENSMUST00000018586	ENSMUSP00000136261	TRANSLATION	nonsense_mediated_decay	-	-	3	83	0	0	0	83.4	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000018442	Derl2	ENSMUST00000108523	ENSMUSP00000104163	TRANSLATION	protein_coding	-	-	1	239	0	0	2	251.7	4	-4,-7	-	-	6.232	MINOR
ENSMUSG00000020476	Dbnl	ENSMUST00000109845	ENSMUSP00000105471	TRANSLATION	protein_coding	-	CCDS48747.1	1	432	0	5.8	1.5	106.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020476	Dbnl	ENSMUST00000020769	ENSMUSP00000020769	TRANSLATION	protein_coding	-	CCDS48746.1	1	436	0	5.8	1.5	106.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020476	Dbnl	ENSMUST00000102928	ENSMUSP00000099992	TRANSLATION	protein_coding	-	CCDS24403.1	1	433	0	5.8	1.5	106.5	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000017204	Gsdma	ENSMUST00000017348	ENSMUSP00000017348	TRANSLATION	protein_coding	-	CCDS25358.1	1	446	0	7.783	7.6	482.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020496	Rnf187	ENSMUST00000094151	ENSMUSP00000091703	TRANSLATION	protein_coding	start	-	1	236	8	0.4	3.9	34.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000069892	9930111J21Rik2	ENSMUST00000093152	ENSMUSP00000090839	TRANSLATION	protein_coding	-	CCDS36144.1	1	467	15	1.8	0.5	413.6	0	-4,-5	-	-	3.858	MINOR
ENSMUSG00000069892	9930111J21Rik2	ENSMUST00000101295	ENSMUSP00000098853	TRANSLATION	protein_coding	-	-	1	844	28	2.8	0.5	910.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069892	9930111J21Rik2	ENSMUST00000132768	ENSMUSP00000120450	TRANSLATION	protein_coding	stop	-	1	125	8	1	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020689	Itgb3	ENSMUST00000127140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020689	Itgb3	ENSMUST00000021028	ENSMUSP00000021028	TRANSLATION	protein_coding	-	CCDS25536.1	1	787	11	13.5	3.9	616.3	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000020925	Ccdc43	ENSMUST00000092569	ENSMUSP00000090230	TRANSLATION	protein_coding	-	CCDS25502.1	1	222	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000020925	Ccdc43	ENSMUST00000153157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020925	Ccdc43	ENSMUST00000138147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020925	Ccdc43	ENSMUST00000164506	ENSMUSP00000127494	TRANSLATION	protein_coding	-	-	5	222	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000020925	Ccdc43	ENSMUST00000124869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049287	Iba57	ENSMUST00000054523	ENSMUSP00000049823	TRANSLATION	protein_coding	-	CCDS24758.1	1	358	0	0.82	1.5	29.1	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000049287	Iba57	ENSMUST00000069631	ENSMUSP00000065882	TRANSLATION	protein_coding	-	-	1	172	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000049287	Iba57	ENSMUST00000137433	ENSMUSP00000114501	TRANSLATION	protein_coding	stop	-	3	215	0	0.12	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000014177	Tvp23b	ENSMUST00000128698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014177	Tvp23b	ENSMUST00000140377	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014177	Tvp23b	ENSMUST00000014321	ENSMUSP00000014321	TRANSLATION	protein_coding	-	CCDS24834.1	1	205	0	0	7.5	187	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000014177	Tvp23b	ENSMUST00000154176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045007	Tubg2	ENSMUST00000043654	ENSMUSP00000045901	TRANSLATION	protein_coding	-	CCDS25452.1	1	451	16	9.75	16.3	392.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000010342	Tex14	ENSMUST00000100657	ENSMUSP00000098222	TRANSLATION	protein_coding	start	-	3	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010342	Tex14	ENSMUST00000060835	ENSMUSP00000054444	TRANSLATION	protein_coding	-	CCDS48877.1	5	1450	0	6.07	0.5	127.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010342	Tex14	ENSMUST00000156483	ENSMUSP00000118114	TRANSLATION	protein_coding	stop	-	1	118	0	2.55	0	34.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010342	Tex14	ENSMUST00000131973	ENSMUSP00000117564	TRANSLATION	protein_coding	start/stop	-	3	200	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010342	Tex14	ENSMUST00000124255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049291	Prss38	ENSMUST00000061481	ENSMUSP00000052010	TRANSLATION	protein_coding	-	CCDS36170.1	1	322	6	3.4	1.5	198.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000018572	Phf23	ENSMUST00000133485	ENSMUSP00000117373	TRANSLATION	protein_coding	-	CCDS78976.1	5	271	8	1	2.7	31.2	0	-4,-5	-	-	18.83	MINOR
ENSMUSG00000018572	Phf23	ENSMUST00000146789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018572	Phf23	ENSMUST00000018716	ENSMUSP00000018716	TRANSLATION	protein_coding	-	CCDS24929.1	1	401	8	1	5.1	31.2	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000018572	Phf23	ENSMUST00000135814	ENSMUSP00000120665	TRANSLATION	protein_coding	-	CCDS78976.1	1	271	8	1	2.7	31.2	0	-4,-5	-	-	18.83	MINOR
ENSMUSG00000018572	Phf23	ENSMUST00000141231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018572	Phf23	ENSMUST00000138186	ENSMUSP00000117635	TRANSLATION	protein_coding	stop	-	3	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018572	Phf23	ENSMUST00000123817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018572	Phf23	ENSMUST00000153684	ENSMUSP00000121780	TRANSLATION	protein_coding	-	CCDS78976.1	1	271	8	1	2.7	31.2	0	-4,-5	-	-	18.83	MINOR
ENSMUSG00000018572	Phf23	ENSMUST00000101526	ENSMUSP00000099064	TRANSLATION	protein_coding	-	CCDS70223.1	1	334	8	1	3.9	31.2	0	-4,-5	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000025130	P4hb	ENSMUST00000166620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025130	P4hb	ENSMUST00000168360	ENSMUSP00000128796	TRANSLATION	protein_coding	-	-	3	165	4	3.2	0	103.3	0	3,-2	-	-	3	MINOR
ENSMUSG00000025130	P4hb	ENSMUST00000026122	ENSMUSP00000026122	TRANSLATION	protein_coding	-	CCDS25742.1	1	509	8	10.2	0.5	359.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000069814	Ccdc92b	ENSMUST00000100866	ENSMUSP00000098429	TRANSLATION	protein_coding	-	CCDS25033.1	1	299	0	0	0.5	68.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020340	Cyfip2	ENSMUST00000093165	ENSMUSP00000090853	TRANSLATION	protein_coding	-	CCDS24573.1	1	1253	0	29.25	19.5	1356.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020340	Cyfip2	ENSMUST00000142017	ENSMUSP00000119801	TRANSLATION	protein_coding	start	-	5	948	0	19.875	0	1294.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020340	Cyfip2	ENSMUST00000165599	ENSMUSP00000127586	TRANSLATION	protein_coding	-	CCDS24573.1	1	1253	0	29.25	19.5	1356.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020340	Cyfip2	ENSMUST00000129474	ENSMUSP00000116715	TRANSLATION	protein_coding	stop	-	2	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020340	Cyfip2	ENSMUST00000093166	ENSMUSP00000090854	TRANSLATION	protein_coding	-	CCDS24573.1	1	1253	0	29.25	19.5	1356.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043284	Tmem11	ENSMUST00000062677	ENSMUSP00000059494	TRANSLATION	protein_coding	-	CCDS24801.1	1	190	0	0	12.9	257.4	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000043284	Tmem11	ENSMUST00000168218	ENSMUSP00000128654	TRANSLATION	protein_coding	-	CCDS48815.1	2	176	0	0	1.5	257.4	0	-4,-6	-	-	6.168	MINOR
ENSMUSG00000043284	Tmem11	ENSMUST00000155031	ENSMUSP00000122930	TRANSLATION	protein_coding	stop	-	2	125	0	0	0	190.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020849	Ywhae	ENSMUST00000067664	ENSMUSP00000070993	TRANSLATION	protein_coding	-	CCDS25056.1	1	255	0	6.13	15.5	358.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020849	Ywhae	ENSMUST00000153038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020849	Ywhae	ENSMUST00000155057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020849	Ywhae	ENSMUST00000134745	ENSMUSP00000117877	TRANSLATION	nonsense_mediated_decay	-	-	1	130	0	2.6	0	139.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020849	Ywhae	ENSMUST00000131398	ENSMUSP00000123504	TRANSLATION	protein_coding	start/stop	-	5	154	0	2.58	0	175.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000098650	Commd1b	ENSMUST00000160826	ENSMUSP00000125609	TRANSLATION	protein_coding,RT	start	-	5	99	0	1	0	98.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035152	Ap2b1	ENSMUST00000065692	ENSMUSP00000070714	TRANSLATION	protein_coding	-	CCDS25162.1	1	937	0	20.1	10.8	711.2	0	-4,-5	-	-	15.268	ALTERNATIVE:1
ENSMUSG00000035152	Ap2b1	ENSMUST00000132178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035152	Ap2b1	ENSMUST00000176944	ENSMUSP00000134798	TRANSLATION	protein_coding	stop	-	3	199	0	5.25	0	214.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035152	Ap2b1	ENSMUST00000176430	ENSMUSP00000134779	TRANSLATION	protein_coding	-	-	1	942	0	19.35	0	685.9	0	-4,-5	-	-	8.982	MINOR
ENSMUSG00000035152	Ap2b1	ENSMUST00000018875	ENSMUSP00000018875	TRANSLATION	protein_coding	-	CCDS25161.1	1	951	0	20.1	13	711.2	0	-4,-5	-	-	16	PRINCIPAL:4
ENSMUSG00000035152	Ap2b1	ENSMUST00000176523	ENSMUSP00000135445	TRANSLATION	protein_coding	-	-	5	913	0	19.1	0	556.6	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000035152	Ap2b1	ENSMUST00000142680	ENSMUSP00000116562	TRANSLATION	protein_coding	stop	-	2	44	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061981	Flot2	ENSMUST00000100784	ENSMUSP00000098347	TRANSLATION	protein_coding	-	CCDS25088.1	1	379	0	3.83	12.8	100.6	0	-4,-5	-	-	14.414	MINOR
ENSMUSG00000061981	Flot2	ENSMUST00000148162	ENSMUSP00000133147	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061981	Flot2	ENSMUST00000072289	ENSMUSP00000072136	TRANSLATION	protein_coding	-	CCDS36237.1	1	428	0	3.83	14.3	113.8	0	-4,-5	-	-	15.658	PRINCIPAL:2
ENSMUSG00000061981	Flot2	ENSMUST00000136353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061981	Flot2	ENSMUST00000073660	ENSMUSP00000073342	TRANSLATION	protein_coding	-	-	5	428	0	4	14.3	109.6	0	-4,-6	-	-	15.748	ALTERNATIVE:1
ENSMUSG00000017832	Hspb9	ENSMUST00000169833	ENSMUSP00000130551	TRANSLATION	protein_coding	-	CCDS48932.1	-	199	0	0.4	0.5	43.6	0	-3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000017832	Hspb9	ENSMUST00000017976	ENSMUSP00000017976	TRANSLATION	protein_coding	-	-	-	168	0	0.4	0	43.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000020712	Tcam1	ENSMUST00000142472	ENSMUSP00000115544	TRANSLATION	nonsense_mediated_decay	-	-	1	399	0	3.44	0	95.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000020712	Tcam1	ENSMUST00000044462	ENSMUSP00000044757	TRANSLATION	protein_coding	-	CCDS48959.1	1	548	0	4.08	1.5	95.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058725	Gm11937	ENSMUST00000076478	ENSMUSP00000075802	TRANSLATION	protein_coding	-	CCDS48910.1	-	131	0	0	5.1	38.2	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000001034	Mapk7	ENSMUST00000139663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000079080	ENSMUSP00000078087	TRANSLATION	protein_coding	-	CCDS24814.1	1	806	17	4	0.5	223.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001034	Mapk7	ENSMUST00000135521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000123360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000140779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000152755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000125840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000101085	ENSMUSP00000098646	TRANSLATION	protein_coding	-	CCDS78963.1	1	703	10	3.198	0.5	197.8	0	-4,-6	-	-	10.17	MINOR
ENSMUSG00000001034	Mapk7	ENSMUST00000126495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000129272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000139932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000153441	ENSMUSP00000116084	TRANSLATION	protein_coding	start/stop	-	3	203	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001034	Mapk7	ENSMUST00000128478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001034	Mapk7	ENSMUST00000108714	ENSMUSP00000104354	TRANSLATION	protein_coding	-	CCDS70205.1	1	737	11	3.066	0.5	198.1	0	-4,-2	-	-	10.59	MINOR
ENSMUSG00000020707	Rnf135	ENSMUST00000134909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020707	Rnf135	ENSMUST00000017839	ENSMUSP00000017839	TRANSLATION	protein_coding	-	CCDS25129.1	1	417	8	1.43	0.5	77.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036275	9530068E07Rik	ENSMUST00000036952	ENSMUSP00000048441	TRANSLATION	protein_coding	-	CCDS24672.1	1	259	0	0	1.5	0	1	-2,1	-	-	0	PRINCIPAL:2
ENSMUSG00000036275	9530068E07Rik	ENSMUST00000153855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036275	9530068E07Rik	ENSMUST00000109057	ENSMUSP00000104685	TRANSLATION	protein_coding	-	-	1	251	0	0	0	0	1	-1,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036275	9530068E07Rik	ENSMUST00000136303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035557	Krt17	ENSMUST00000080893	ENSMUSP00000079699	TRANSLATION	protein_coding	-	CCDS25415.1	1	433	0	4.286	6.4	399.3	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000059534	Uqcr10	ENSMUST00000058407	ENSMUSP00000054856	TRANSLATION	protein_coding	-	CCDS36098.1	1	64	9	1.5	7.5	90.9	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000059534	Uqcr10	ENSMUST00000130236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059534	Uqcr10	ENSMUST00000151559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017561	Crlf3	ENSMUST00000092858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017561	Crlf3	ENSMUST00000147164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017561	Crlf3	ENSMUST00000061283	ENSMUSP00000060028	TRANSLATION	protein_coding	-	CCDS25126.1	1	442	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:3
ENSMUSG00000017561	Crlf3	ENSMUST00000103233	ENSMUSP00000099523	TRANSLATION	protein_coding	-	CCDS70260.1	1	344	2	0	0.5	0	0	-4,-5	-	-	2	ALTERNATIVE:2
ENSMUSG00000017561	Crlf3	ENSMUST00000179855	ENSMUSP00000137124	TRANSLATION	nonsense_mediated_decay	start	-	3	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017561	Crlf3	ENSMUST00000178280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017561	Crlf3	ENSMUST00000178893	ENSMUSP00000137371	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017561	Crlf3	ENSMUST00000177825	ENSMUSP00000136473	TRANSLATION	nonsense_mediated_decay	-	-	5	168	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044749	Abca6	ENSMUST00000044003	ENSMUSP00000035458	TRANSLATION	protein_coding	-	CCDS25590.1	1	1624	20	10.67	0.5	338.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000044749	Abca6	ENSMUST00000150988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014243	Zswim7	ENSMUST00000072916	ENSMUSP00000072688	TRANSLATION	protein_coding	-	CCDS48816.1	1	152	0	0	0.5	32	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000063652	Slc22a21	ENSMUST00000076493	ENSMUSP00000075814	TRANSLATION	protein_coding	-	CCDS24688.1	1	564	0	4.218	0.5	102.6	13	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063652	Slc22a21	ENSMUST00000129301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063652	Slc22a21	ENSMUST00000124221	ENSMUSP00000123180	TRANSLATION	nonsense_mediated_decay	-	-	5	174	0	0.6	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000063652	Slc22a21	ENSMUST00000143352	ENSMUSP00000114966	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0.6	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000025134	Alyref	ENSMUST00000026125	ENSMUSP00000026125	TRANSLATION	protein_coding	-	CCDS25744.1	1	255	0	2.85	3.9	91.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025134	Alyref	ENSMUST00000156685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025134	Alyref	ENSMUST00000155325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037533	Rapgef6	ENSMUST00000102743	ENSMUSP00000099804	TRANSLATION	protein_coding	-	CCDS24699.1	5	1601	0	8.85	0.5	351.9	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000037533	Rapgef6	ENSMUST00000136494	ENSMUSP00000114574	TRANSLATION	protein_coding	start	-	3	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000218995	ENSMUSP00000151509	TRANSLATION	protein_coding	stop	-	1	599	0	6.03	0	128.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000207429	ENSMUSP00000147135	TRANSLATION	protein_coding	-	CCDS83809.1	1	1606	0	8.85	0.5	351.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037533	Rapgef6	ENSMUST00000139360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037533	Rapgef6	ENSMUST00000149372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037533	Rapgef6	ENSMUST00000101206	ENSMUSP00000098766	TRANSLATION	protein_coding	-	-	5	1609	0	8.85	0.5	351.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037533	Rapgef6	ENSMUST00000108894	ENSMUSP00000104522	TRANSLATION	protein_coding	-	-	5	1131	0	8.15	0	351.9	0	-4,-7	-	-	10.602	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000108895	ENSMUSP00000104523	TRANSLATION	protein_coding	-	-	1	544	0	4.23	0	81.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000155132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037533	Rapgef6	ENSMUST00000239168	ENSMUSP00000159106	TRANSLATION	protein_coding	-	-	-	1267	0	6.4	0	316.7	0	-3,-6	-	-	4.986	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000094536	ENSMUSP00000092114	TRANSLATION	protein_coding	-	-	5	1123	0	8.15	0	351.9	0	-4,-7	-	-	10.602	MINOR
ENSMUSG00000037533	Rapgef6	ENSMUST00000220269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020173	Cobl	ENSMUST00000172919	ENSMUSP00000133669	TRANSLATION	protein_coding	-	-	1	349	0	1	0	149.1	0	-4,-7	-	-	5.016	MINOR
ENSMUSG00000020173	Cobl	ENSMUST00000109650	ENSMUSP00000105277	TRANSLATION	protein_coding	-	-	5	1255	0	3	0.5	198.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000020173	Cobl	ENSMUST00000172956	ENSMUSP00000134372	TRANSLATION	nonsense_mediated_decay	-	-	1	410	0	1	0	149.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020173	Cobl	ENSMUST00000109651	ENSMUSP00000105278	TRANSLATION	protein_coding	-	CCDS70144.1	1	1312	0	3	0.5	198.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000020173	Cobl	ENSMUST00000130572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020173	Cobl	ENSMUST00000136549	ENSMUSP00000114779	TRANSLATION	protein_coding	start	-	2	159	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020173	Cobl	ENSMUST00000172827	ENSMUSP00000133368	TRANSLATION	protein_coding	start/stop	-	3	208	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020173	Cobl	ENSMUST00000046755	ENSMUSP00000045693	TRANSLATION	protein_coding	-	CCDS36113.1	1	1337	0	3	0.5	198.8	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000020173	Cobl	ENSMUST00000146067	ENSMUSP00000119008	TRANSLATION	protein_coding	start/stop	-	5	216	0	1	0	145.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020173	Cobl	ENSMUST00000174874	ENSMUSP00000133470	TRANSLATION	protein_coding	-	CCDS70142.1	1	1330	0	3	0.5	198.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000069873	4930438A08Rik	ENSMUST00000108834	ENSMUSP00000104462	TRANSLATION	protein_coding	-	-	5	536	34	6.388	1.5	244.2	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000069873	4930438A08Rik	ENSMUST00000208022	ENSMUSP00000147249	TRANSLATION	protein_coding	-	-	5	305	16	4.55	0	91.4	0	2,-3	-	-	2.322	MINOR
ENSMUSG00000075567	Krtap1-4	ENSMUST00000100479	ENSMUSP00000098048	TRANSLATION	protein_coding	-	CCDS48908.1	-	188	0	0	0.5	173.4	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000017446	C1qtnf1	ENSMUST00000106286	ENSMUSP00000101893	TRANSLATION	protein_coding	-	CCDS25703.1	1	281	0	0.6	1.5	164.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000017446	C1qtnf1	ENSMUST00000133558	ENSMUSP00000117467	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000017446	C1qtnf1	ENSMUST00000017590	ENSMUSP00000017590	TRANSLATION	protein_coding	-	CCDS25703.1	1	281	0	0.6	1.5	164.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000017446	C1qtnf1	ENSMUST00000124861	ENSMUSP00000122759	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000018986	Slfn3	ENSMUST00000216599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018986	Slfn3	ENSMUST00000214041	ENSMUSP00000150425	TRANSLATION	protein_coding	-	-	1	640	0	0	0	34.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018986	Slfn3	ENSMUST00000019130	ENSMUSP00000019130	TRANSLATION	protein_coding	-	CCDS25159.1	1	517	0	0	0.5	34.2	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000078256	Gm11565	ENSMUST00000105053	ENSMUSP00000100674	TRANSLATION	protein_coding	-	CCDS48925.1	-	156	0	0	0.5	44.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000078619	Smarcd2	ENSMUST00000106841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078619	Smarcd2	ENSMUST00000021052	ENSMUSP00000021052	TRANSLATION	protein_coding	-	CCDS48958.1	1	531	0	1.8	7.5	68.2	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078619	Smarcd2	ENSMUST00000174253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078619	Smarcd2	ENSMUST00000106843	ENSMUSP00000102456	TRANSLATION	protein_coding	-	CCDS48957.1	1	484	0	1.8	0.5	68.2	0	-4,-2	-	-	12	MINOR
ENSMUSG00000078619	Smarcd2	ENSMUST00000155514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078619	Smarcd2	ENSMUST00000174017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078619	Smarcd2	ENSMUST00000155243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078619	Smarcd2	ENSMUST00000140255	ENSMUSP00000133629	TRANSLATION	protein_coding	start	-	5	247	0	1.8	0	68.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078619	Smarcd2	ENSMUST00000132278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020676	Ccl11	ENSMUST00000000342	ENSMUSP00000000342	TRANSLATION	protein_coding	-	CCDS36246.1	1	97	0	2	2.7	75.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038067	Csf3	ENSMUST00000038886	ENSMUSP00000037762	TRANSLATION	protein_coding	-	CCDS25360.1	1	208	0	3.8	0.5	302.4	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000007653	Gabrb2	ENSMUST00000136050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007653	Gabrb2	ENSMUST00000192403	ENSMUSP00000141868	TRANSLATION	protein_coding	-	-	1	512	5	6.5	9.8	336.8	3	2,-5	-	-	19.2	MINOR
ENSMUSG00000007653	Gabrb2	ENSMUST00000143626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007653	Gabrb2	ENSMUST00000140463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007653	Gabrb2	ENSMUST00000007797	ENSMUSP00000007797	TRANSLATION	protein_coding	-	CCDS24555.1	1	474	5	6.5	17	330.6	3	2,-5	-	-	20.628	PRINCIPAL:1
ENSMUSG00000112920	Spata22	ENSMUST00000092926	ENSMUSP00000090602	TRANSLATION	protein_coding	-	CCDS36219.1	1	358	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000058163	Gm5431	ENSMUST00000109210	ENSMUSP00000104833	TRANSLATION	protein_coding	-	CCDS36141.2	1	566	14	1	0.5	573.6	0	-4,-7	-	-	6	MINOR
ENSMUSG00000058163	Gm5431	ENSMUST00000109212	ENSMUSP00000104835	TRANSLATION	protein_coding	-	-	5	844	27	1	0.5	914.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058163	Gm5431	ENSMUST00000109209	ENSMUSP00000104832	TRANSLATION	protein_coding	-	CCDS36141.2	5	566	14	1	0.5	573.6	0	-4,-7	-	-	6	MINOR
ENSMUSG00000020288	Ahsa2	ENSMUST00000020529	ENSMUSP00000020529	TRANSLATION	protein_coding	-	CCDS24476.1	1	331	0	5.345	2.7	186.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020288	Ahsa2	ENSMUST00000124801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020288	Ahsa2	ENSMUST00000147157	ENSMUSP00000121920	TRANSLATION	protein_coding	stop	-	3	200	0	2.445	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020288	Ahsa2	ENSMUST00000109539	ENSMUSP00000105166	TRANSLATION	protein_coding	-	CCDS70149.1	1	283	0	4.535	1.5	163.3	0	-4,-5	-	-	8.994	MINOR
ENSMUSG00000020288	Ahsa2	ENSMUST00000153409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020288	Ahsa2	ENSMUST00000128372	ENSMUSP00000121255	TRANSLATION	protein_coding	start	-	1	317	0	4.895	0	186.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020288	Ahsa2	ENSMUST00000122864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020288	Ahsa2	ENSMUST00000128559	ENSMUSP00000115134	TRANSLATION	protein_coding	stop	-	2	199	0	2.245	0	113.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045377	Tmem88	ENSMUST00000050140	ENSMUSP00000055528	TRANSLATION	protein_coding	-	CCDS24894.1	1	159	0	0	5.1	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000053783	1700016K19Rik	ENSMUST00000066408	ENSMUSP00000063358	TRANSLATION	protein_coding	-	CCDS25059.1	1	228	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000064224	Gsdma3	ENSMUST00000073295	ENSMUSP00000073022	TRANSLATION	protein_coding	-	CCDS25356.1	1	464	0	9.08	0.5	433.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064224	Gsdma3	ENSMUST00000107508	ENSMUSP00000103132	TRANSLATION	protein_coding	-	-	5	455	0	8.75	0	428.3	0	-4,-5	-	-	11.04	MINOR
ENSMUSG00000040471	Ggt6	ENSMUST00000108499	ENSMUSP00000104139	TRANSLATION	protein_coding	-	-	1	58	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040471	Ggt6	ENSMUST00000076443	ENSMUSP00000075773	TRANSLATION	protein_coding	-	CCDS36216.1	1	497	0	1.578	1.7	90.4	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040471	Ggt6	ENSMUST00000100903	ENSMUSP00000098463	TRANSLATION	protein_coding	-	-	5	459	0	0.578	1.2	61.8	1	-4,-6	-	-	6.3	MINOR
ENSMUSG00000005202	Shbg	ENSMUST00000005334	ENSMUSP00000005334	TRANSLATION	protein_coding	-	CCDS24899.1	1	403	0	5.28	0.5	102	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000005202	Shbg	ENSMUST00000137159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040838	Gm11639	ENSMUST00000148007	ENSMUSP00000116040	TRANSLATION	protein_coding	-	-	5	1124	3	4.825	0	21.6	0	-4,-5	-	-	5.832	MINOR
ENSMUSG00000040838	Gm11639	ENSMUST00000212287	ENSMUSP00000148433	TRANSLATION	protein_coding	-	-	5	5808	16	5.785	0	74	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040838	Gm11639	ENSMUST00000175713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071866	Ppia	ENSMUST00000137829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071866	Ppia	ENSMUST00000213200	ENSMUSP00000150020	TRANSLATION	protein_coding	-	-	5	156	8	3.08	0	148.8	0	-4,-7	-	-	15.804	MINOR
ENSMUSG00000071866	Ppia	ENSMUST00000135789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071866	Ppia	ENSMUST00000090749	ENSMUSP00000149662	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071866	Ppia	ENSMUST00000132846	ENSMUSP00000117987	TRANSLATION	protein_coding	-	CCDS24419.1	1	164	8	3.83	20.3	160.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000071866	Ppia	ENSMUST00000155824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025580	Eif4a3	ENSMUST00000134743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025580	Eif4a3	ENSMUST00000138849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025580	Eif4a3	ENSMUST00000106253	ENSMUSP00000101860	TRANSLATION	protein_coding	stop	-	5	299	13	7.25	0	132.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025580	Eif4a3	ENSMUST00000129044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025580	Eif4a3	ENSMUST00000026667	ENSMUSP00000026667	TRANSLATION	protein_coding	-	CCDS25714.1	1	411	14	10.33	10.8	251	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000025580	Eif4a3	ENSMUST00000135294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002129	Sf3a1	ENSMUST00000133095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002129	Sf3a1	ENSMUST00000129583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002129	Sf3a1	ENSMUST00000002198	ENSMUSP00000002198	TRANSLATION	protein_coding	-	CCDS24380.1	1	791	0	6.795	1.5	396.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002129	Sf3a1	ENSMUST00000132666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000136229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000122945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020486	Septin4	ENSMUST00000133202	ENSMUSP00000115790	TRANSLATION	protein_coding	stop	-	5	280	9	4.5	0	236.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000135175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000107962	ENSMUSP00000103596	TRANSLATION	protein_coding	-	-	5	459	16	8.764	7.5	428.9	0	-4,-5	-	-	15	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000063156	ENSMUSP00000060127	TRANSLATION	protein_coding	-	CCDS70277.1	1	379	16	8.764	7.5	428.9	0	-4,-5	-	-	15	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000127414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000123081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000060360	ENSMUSP00000053087	TRANSLATION	protein_coding	-	-	5	536	0	0	0	539.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000133638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000107961	ENSMUSP00000103595	TRANSLATION	protein_coding	stop	-	3	232	16	6	0	291.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000140398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000018544	ENSMUSP00000018544	TRANSLATION	protein_coding	-	CCDS25213.1	1	478	16	8.764	7.5	428.9	0	-4,-5	-	-	15	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000239011	ENSMUSP00000158869	TRANSLATION	protein_coding	-	-	-	971	16	8.764	0.5	968.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020486	Septin4	ENSMUST00000122067	ENSMUSP00000112960	TRANSLATION	protein_coding	-	CCDS70275.1	1	313	16	8	0.5	428.9	0	-4,-5	-	-	10.47	MINOR
ENSMUSG00000020486	Septin4	ENSMUST00000148216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000143950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020486	Septin4	ENSMUST00000132723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000134923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020486	Septin4	ENSMUST00000107960	ENSMUSP00000103594	TRANSLATION	protein_coding	-	CCDS70276.1	1	431	16	8	1.5	428.9	0	-4,-5	-	-	10.701	MINOR
ENSMUSG00000040328	Olfr56	ENSMUST00000179282	ENSMUSP00000136647	TRANSLATION	protein_coding	-	CCDS24597.1	5	283	0	0.4	0.5	171.1	6	1,-3	-	-	12	MINOR
ENSMUSG00000040328	Olfr56	ENSMUST00000056759	ENSMUSP00000058544	TRANSLATION	protein_coding	-	CCDS24597.1	5	283	0	0.4	0.5	171.1	6	1,-3	-	-	12	MINOR
ENSMUSG00000040328	Olfr56	ENSMUST00000203810	ENSMUSP00000144951	TRANSLATION	protein_coding	-	-	5	315	0	0.4	7.5	171.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040328	Olfr56	ENSMUST00000239127	ENSMUSP00000159088	TRANSLATION	protein_coding	-	CCDS24597.1	-	283	0	0.4	0.5	171.1	6	1,-3	-	-	12	MINOR
ENSMUSG00000040328	Olfr56	ENSMUST00000238881	ENSMUSP00000158965	TRANSLATION	protein_coding	-	-	-	315	0	0.4	7.5	171.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040328	Olfr56	ENSMUST00000203412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040328	Olfr56	ENSMUST00000203149	ENSMUSP00000145429	TRANSLATION	protein_coding	-	-	1	315	0	0.4	7.5	171.1	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000040328	Olfr56	ENSMUST00000102785	ENSMUSP00000099846	TRANSLATION	protein_coding	-	CCDS24597.1	1	283	0	0.4	0.5	171.1	6	1,-3	-	-	12	MINOR
ENSMUSG00000020407	Upp1	ENSMUST00000166455	ENSMUSP00000129276	TRANSLATION	protein_coding	start/stop	-	5	143	7	4.004	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020407	Upp1	ENSMUST00000172452	ENSMUSP00000129787	TRANSLATION	protein_coding	stop	-	5	114	3	2.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020407	Upp1	ENSMUST00000020677	ENSMUSP00000020677	TRANSLATION	protein_coding	-	CCDS24432.1	1	311	10	7.07	3.9	101	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020407	Upp1	ENSMUST00000130522	ENSMUSP00000123285	TRANSLATION	protein_coding	stop	-	2	137	4	3.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020407	Upp1	ENSMUST00000168121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020407	Upp1	ENSMUST00000164791	ENSMUSP00000127473	TRANSLATION	protein_coding	-	CCDS24432.1	1	311	10	7.07	3.9	101	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020407	Upp1	ENSMUST00000101525	ENSMUSP00000099063	TRANSLATION	protein_coding	-	CCDS24432.1	1	311	10	7.07	3.9	101	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020407	Upp1	ENSMUST00000146696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020407	Upp1	ENSMUST00000170444	ENSMUSP00000125934	TRANSLATION	protein_coding	stop	-	5	149	7	3.74	0	31.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069823	Olfr1	ENSMUST00000120303	ENSMUSP00000113707	TRANSLATION	protein_coding	-	CCDS25008.1	1	314	0	0.78	1.5	198.2	7	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069823	Olfr1	ENSMUST00000131253	ENSMUSP00000120899	TRANSLATION	protein_coding	stop	-	3	196	0	0.42	0	115.3	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000020614	Fam20a	ENSMUST00000020938	ENSMUSP00000020938	TRANSLATION	protein_coding	-	CCDS25584.1	1	541	0	6.58	0.5	332	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000020614	Fam20a	ENSMUST00000155559	ENSMUSP00000116687	TRANSLATION	nonsense_mediated_decay	-	-	1	541	0	6.58	0.5	332	0	0,-4	-	-	-1	MINOR
ENSMUSG00000020614	Fam20a	ENSMUST00000144972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020614	Fam20a	ENSMUST00000146408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032921	Odf4	ENSMUST00000156828	ENSMUSP00000133569	TRANSLATION	nonsense_mediated_decay	start	-	3	140	0	0	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000032921	Odf4	ENSMUST00000125134	ENSMUSP00000133636	TRANSLATION	protein_coding	-	-	3	177	0	0	0	0	3	-4,-6	-	-	0	MINOR
ENSMUSG00000032921	Odf4	ENSMUST00000038932	ENSMUSP00000040050	TRANSLATION	protein_coding	-	CCDS24872.1	1	290	0	0	0.5	26.1	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000032921	Odf4	ENSMUST00000130271	ENSMUSP00000134383	TRANSLATION	nonsense_mediated_decay	-	-	5	178	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000018923	Med11	ENSMUST00000152348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018923	Med11	ENSMUST00000151013	ENSMUSP00000134323	TRANSLATION	protein_coding	-	-	2	127	0	0	0	37.9	0	-4,-5	-	-	4.404	MINOR
ENSMUSG00000018923	Med11	ENSMUST00000019067	ENSMUSP00000019067	TRANSLATION	protein_coding	-	CCDS24947.1	1	117	0	0	8.8	51.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000046974	BC053393	ENSMUST00000050937	ENSMUSP00000050057	TRANSLATION	protein_coding	-	CCDS24580.1	1	192	0	1	1.5	44.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001493	Meox1	ENSMUST00000057054	ENSMUSP00000051158	TRANSLATION	protein_coding	-	CCDS25480.1	1	253	0	1.8	7.5	79.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020368	Canx	ENSMUST00000179865	ENSMUSP00000137440	TRANSLATION	protein_coding	-	CCDS24633.1	1	591	4	8.65	1.5	558.1	1	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000020368	Canx	ENSMUST00000146979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020368	Canx	ENSMUST00000155801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020368	Canx	ENSMUST00000020637	ENSMUSP00000020637	TRANSLATION	protein_coding	-	CCDS24633.1	1	591	4	8.65	1.5	558.1	1	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000020368	Canx	ENSMUST00000153068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020882	Cacnb1	ENSMUST00000107562	ENSMUSP00000103187	TRANSLATION	protein_coding	-	CCDS48899.1	1	479	0	9.58	1.7	247.7	0	-4,-6	-	-	12.264	MINOR
ENSMUSG00000020882	Cacnb1	ENSMUST00000124170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020882	Cacnb1	ENSMUST00000092736	ENSMUSP00000090412	TRANSLATION	protein_coding	-	CCDS25336.1	1	524	0	9.45	5.3	247.7	0	-4,-6	-	-	13.364	ALTERNATIVE:1
ENSMUSG00000020882	Cacnb1	ENSMUST00000017552	ENSMUSP00000017552	TRANSLATION	protein_coding	-	CCDS25335.1	1	597	0	9.58	6.3	247.7	0	-4,-6	-	-	14	PRINCIPAL:4
ENSMUSG00000020882	Cacnb1	ENSMUST00000103144	ENSMUSP00000099433	TRANSLATION	protein_coding	-	-	5	677	0	9.45	0	247.7	0	-4,-6	-	-	11.742	MINOR
ENSMUSG00000020882	Cacnb1	ENSMUST00000107561	ENSMUSP00000103186	TRANSLATION	protein_coding	-	CCDS48898.1	1	477	0	9.45	2.7	247.7	0	-4,-5	-	-	12.384	MINOR
ENSMUSG00000020882	Cacnb1	ENSMUST00000135462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020723	Cacng4	ENSMUST00000021066	ENSMUSP00000021066	TRANSLATION	protein_coding	-	CCDS25571.1	1	327	0	3.35	8.4	135.8	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020723	Cacng4	ENSMUST00000134076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035172	Plekhh3	ENSMUST00000139200	ENSMUSP00000137793	TRANSLATION	nonsense_mediated_decay	start	-	1	320	0	2.96	0	60.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035172	Plekhh3	ENSMUST00000043397	ENSMUSP00000046044	TRANSLATION	protein_coding	-	CCDS25453.1	1	796	0	7.3998	3.9	129.9	0	0,-5	-	-	12.784	PRINCIPAL:3
ENSMUSG00000035172	Plekhh3	ENSMUST00000164474	ENSMUSP00000127088	TRANSLATION	protein_coding	-	CCDS83899.1	1	793	0	7.3998	3.9	133.5	0	0,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000035172	Plekhh3	ENSMUST00000129895	ENSMUSP00000137841	TRANSLATION	nonsense_mediated_decay	-	-	5	705	0	5.9798	0	131.1	0	0,-5	-	-	-1	MINOR
ENSMUSG00000035172	Plekhh3	ENSMUST00000156320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035172	Plekhh3	ENSMUST00000123864	ENSMUSP00000120865	TRANSLATION	protein_coding	stop	-	3	247	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000049	Apoh	ENSMUST00000146050	ENSMUSP00000123486	TRANSLATION	protein_coding	stop	-	2	33	0	0.54	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000049	Apoh	ENSMUST00000152958	ENSMUSP00000114214	TRANSLATION	protein_coding	stop	-	5	154	0	4.04	0	76.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000049	Apoh	ENSMUST00000133383	ENSMUSP00000115516	TRANSLATION	protein_coding	stop	-	3	51	0	1.04	0	23.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000000049	Apoh	ENSMUST00000000049	ENSMUSP00000000049	TRANSLATION	protein_coding	-	CCDS25574.1	1	345	0	7.54	8.8	277.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000018238	Gdf9	ENSMUST00000018382	ENSMUSP00000018382	TRANSLATION	protein_coding	-	CCDS24679.1	1	441	0	0.2	1.5	91.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000018238	Gdf9	ENSMUST00000156037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018238	Gdf9	ENSMUST00000145369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020792	Exoc7	ENSMUST00000136417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020792	Exoc7	ENSMUST00000021147	ENSMUSP00000021147	TRANSLATION	protein_coding	-	CCDS25664.1	1	697	0	14.08	14.8	270.2	0	-4,-5	-	-	15.4	PRINCIPAL:3
ENSMUSG00000020792	Exoc7	ENSMUST00000124281	ENSMUSP00000115737	TRANSLATION	protein_coding	stop	-	5	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020792	Exoc7	ENSMUST00000141938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020792	Exoc7	ENSMUST00000139699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020792	Exoc7	ENSMUST00000133468	ENSMUSP00000121150	TRANSLATION	protein_coding	stop	-	2	105	0	1.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020792	Exoc7	ENSMUST00000155288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020792	Exoc7	ENSMUST00000126731	ENSMUSP00000121794	TRANSLATION	protein_coding	start/stop	-	5	288	0	3.88	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020792	Exoc7	ENSMUST00000106411	ENSMUSP00000102019	TRANSLATION	protein_coding	-	CCDS48983.1	1	653	0	14.38	12.8	266.9	0	-4,-5	-	-	15.222	ALTERNATIVE:1
ENSMUSG00000020792	Exoc7	ENSMUST00000106413	ENSMUSP00000102021	TRANSLATION	protein_coding	-	CCDS83935.1	5	684	0	13.88	14.8	266.9	0	-4,-5	-	-	14.8	MINOR
ENSMUSG00000007850	Hnrnph1	ENSMUST00000134230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000141668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000150153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000156642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000069304	ENSMUSP00000070503	TRANSLATION	protein_coding	-	CCDS24634.1	1	449	0	7.35	8.8	188.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000007850	Hnrnph1	ENSMUST00000127964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000129631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000109142	ENSMUSP00000104770	TRANSLATION	protein_coding	-	CCDS24634.1	1	449	0	7.35	8.8	188.6	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000007850	Hnrnph1	ENSMUST00000128220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000132715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000133435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000143301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000151537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000126737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000123371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000140056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000150657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007850	Hnrnph1	ENSMUST00000077817	ENSMUSP00000076989	TRANSLATION	protein_coding	-	CCDS83800.1	1	472	0	7.35	7.8	188.6	0	-4,-5	-	-	14.616	ALTERNATIVE:1
ENSMUSG00000017286	Glod4	ENSMUST00000168055	ENSMUSP00000130675	TRANSLATION	protein_coding	start/stop	-	5	97	2	3.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000167883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017286	Glod4	ENSMUST00000017430	ENSMUSP00000017430	TRANSLATION	protein_coding	-	CCDS25063.1	1	298	1	8.24	7.5	0	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000017286	Glod4	ENSMUST00000170017	ENSMUSP00000132496	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	1.49	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000170590	ENSMUSP00000129009	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	1.49	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000170710	ENSMUSP00000131788	TRANSLATION	protein_coding	-	-	1	279	1	7.25	0.5	0	0	-4,-5	-	-	5.02	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000169701	ENSMUSP00000131174	TRANSLATION	protein_coding	-	-	2	279	1	8.24	0	0	0	-4,0	-	-	7	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000164022	ENSMUSP00000126699	TRANSLATION	protein_coding	start/stop	-	5	212	1	6.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017286	Glod4	ENSMUST00000169532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076435	Acsf2	ENSMUST00000103164	ENSMUSP00000099453	TRANSLATION	protein_coding	-	CCDS25259.1	1	615	23	10.715	1.5	397.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000076435	Acsf2	ENSMUST00000155122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076435	Acsf2	ENSMUST00000131808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076435	Acsf2	ENSMUST00000144615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020903	Stx8	ENSMUST00000021286	ENSMUSP00000021286	TRANSLATION	protein_coding	-	-	1	130	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020903	Stx8	ENSMUST00000021285	ENSMUSP00000021285	TRANSLATION	protein_coding	-	CCDS24863.1	1	236	0	2	11.6	35.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020903	Stx8	ENSMUST00000148642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020903	Stx8	ENSMUST00000129992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020903	Stx8	ENSMUST00000142649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020903	Stx8	ENSMUST00000108675	ENSMUSP00000104315	TRANSLATION	protein_coding	-	-	1	126	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020152	Actr2	ENSMUST00000134779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020152	Actr2	ENSMUST00000132022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020152	Actr2	ENSMUST00000000137	ENSMUSP00000000137	TRANSLATION	protein_coding	-	CCDS24455.1	1	394	20	8.25	17.5	390.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000055971	Olfr378	ENSMUST00000069790	ENSMUSP00000066971	TRANSLATION	protein_coding	-	CCDS25009.1	2	314	0	0.42	5.1	185.5	0	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000020553	Pctp	ENSMUST00000020864	ENSMUSP00000020864	TRANSLATION	protein_coding	-	CCDS25238.1	1	214	0	5.25	1.5	141.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052915	Msl1	ENSMUST00000107487	ENSMUSP00000103111	TRANSLATION	protein_coding	-	-	2	600	0	4.45	6.3	164.2	0	-4,-7	-	-	13.443	MINOR
ENSMUSG00000052915	Msl1	ENSMUST00000107485	ENSMUSP00000103109	TRANSLATION	protein_coding	-	-	1	463	0	0.6	0	66.5	0	-4,-7	-	-	0.138	MINOR
ENSMUSG00000052915	Msl1	ENSMUST00000141016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052915	Msl1	ENSMUST00000037930	ENSMUSP00000043328	TRANSLATION	protein_coding	-	-	1	370	0	4.05	0.5	97.7	0	-4,-2	-	-	6.21	MINOR
ENSMUSG00000052915	Msl1	ENSMUST00000126969	ENSMUSP00000116598	TRANSLATION	protein_coding	start/stop	-	3	147	0	2	0	47.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052915	Msl1	ENSMUST00000037915	ENSMUSP00000042792	TRANSLATION	protein_coding	-	CCDS25364.1	1	616	0	4.95	7.5	163.5	0	-4,-7	-	-	14.958	PRINCIPAL:1
ENSMUSG00000020275	Rel	ENSMUST00000102864	ENSMUSP00000099928	TRANSLATION	protein_coding	-	CCDS24480.1	1	588	0	6.15	0.5	375.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071415	Rpl23	ENSMUST00000103146	ENSMUSP00000099435	TRANSLATION	protein_coding	-	CCDS25331.1	1	140	0	3.75	19.5	0	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000071415	Rpl23	ENSMUST00000151118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071415	Rpl23	ENSMUST00000150955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071415	Rpl23	ENSMUST00000128801	ENSMUSP00000117316	TRANSLATION	protein_coding	stop	-	3	60	0	1.25	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000071415	Rpl23	ENSMUST00000151965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006057	Atp5g1	ENSMUST00000107684	ENSMUSP00000103312	TRANSLATION	protein_coding	-	CCDS25289.1	1	136	0	2	10.8	44.2	2	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000006057	Atp5g1	ENSMUST00000178611	ENSMUSP00000137633	TRANSLATION	protein_coding	-	CCDS25289.1	1	136	0	2	10.8	44.2	2	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000006057	Atp5g1	ENSMUST00000090541	ENSMUSP00000088029	TRANSLATION	protein_coding	-	CCDS25289.1	1	136	0	2	10.8	44.2	2	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000006057	Atp5g1	ENSMUST00000107686	ENSMUSP00000103314	TRANSLATION	protein_coding	-	CCDS25289.1	3	136	0	2	10.8	44.2	2	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000009894	Snap47	ENSMUST00000125846	ENSMUSP00000119433	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009894	Snap47	ENSMUST00000145550	ENSMUSP00000114816	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009894	Snap47	ENSMUST00000150297	ENSMUSP00000122508	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009894	Snap47	ENSMUST00000010038	ENSMUSP00000010038	TRANSLATION	protein_coding	-	CCDS24767.1	1	413	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000009894	Snap47	ENSMUST00000120940	ENSMUSP00000113555	TRANSLATION	protein_coding	-	-	1	329	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000009894	Snap47	ENSMUST00000156146	ENSMUSP00000121880	TRANSLATION	protein_coding	stop	-	3	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009894	Snap47	ENSMUST00000132969	ENSMUSP00000116170	TRANSLATION	protein_coding	stop	-	2	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009894	Snap47	ENSMUST00000136436	ENSMUSP00000115762	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017607	Tns4	ENSMUST00000017751	ENSMUSP00000017751	TRANSLATION	protein_coding	-	CCDS25372.1	1	696	0	6.3886	0.5	132.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000017607	Tns4	ENSMUST00000107465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017607	Tns4	ENSMUST00000153351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017607	Tns4	ENSMUST00000123303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069825	Gm49340	ENSMUST00000117445	ENSMUSP00000113799	TRANSLATION	protein_coding,RT	-	-	2	311	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000038893	Fam117a	ENSMUST00000155999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038893	Fam117a	ENSMUST00000129553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038893	Fam117a	ENSMUST00000037502	ENSMUSP00000049162	TRANSLATION	protein_coding	-	CCDS25276.1	1	451	0	0	0.5	377.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038893	Fam117a	ENSMUST00000143482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038893	Fam117a	ENSMUST00000132357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038893	Fam117a	ENSMUST00000129290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060335	Olfr384	ENSMUST00000214228	ENSMUSP00000148997	TRANSLATION	protein_coding	-	CCDS25014.1	5	312	0	0.42	1.5	203.4	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060335	Olfr384	ENSMUST00000072993	ENSMUSP00000072758	TRANSLATION	protein_coding	-	CCDS25014.1	-	312	0	0.42	1.5	203.4	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072709	Olfr380	ENSMUST00000075532	ENSMUSP00000074971	TRANSLATION	protein_coding	-	CCDS25010.1	-	311	0	0.3	1.5	188.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072709	Olfr380	ENSMUST00000121209	ENSMUSP00000112462	TRANSLATION	protein_coding	-	CCDS25010.1	3	311	0	0.3	1.5	188.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072709	Olfr380	ENSMUST00000127789	ENSMUSP00000116228	TRANSLATION	protein_coding	-	CCDS25010.1	5	311	0	0.3	1.5	188.2	5	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039337	Tex19.2	ENSMUST00000039146	ENSMUSP00000037027	TRANSLATION	protein_coding	-	CCDS25767.1	1	317	0	0	0.5	222.2	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000049659	Aftph	ENSMUST00000177543	ENSMUSP00000134991	TRANSLATION	protein_coding	-	CCDS56761.1	1	822	0	0	0.5	73.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049659	Aftph	ENSMUST00000146722	ENSMUSP00000121612	TRANSLATION	protein_coding	-	CCDS70146.1	5	931	0	0	1.5	73.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000049659	Aftph	ENSMUST00000035350	ENSMUSP00000036778	TRANSLATION	protein_coding	-	CCDS24459.1	1	904	0	0	1.5	73.2	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000049659	Aftph	ENSMUST00000134897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049659	Aftph	ENSMUST00000134517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049659	Aftph	ENSMUST00000176782	ENSMUSP00000134791	TRANSLATION	protein_coding	start/stop	-	3	292	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049659	Aftph	ENSMUST00000176585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049659	Aftph	ENSMUST00000134841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049659	Aftph	ENSMUST00000177014	ENSMUSP00000135450	TRANSLATION	nonsense_mediated_decay	start	-	2	685	0	0	0	73.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020715	Ern1	ENSMUST00000131895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020715	Ern1	ENSMUST00000106801	ENSMUSP00000102413	TRANSLATION	protein_coding	-	-	1	408	0	8.58	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000020715	Ern1	ENSMUST00000001059	ENSMUSP00000001059	TRANSLATION	protein_coding	-	CCDS25556.1	1	977	20	17.53	1.5	288.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020715	Ern1	ENSMUST00000106800	ENSMUSP00000102412	TRANSLATION	protein_coding	-	-	3	118	0	2.08	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000020715	Ern1	ENSMUST00000106799	ENSMUSP00000102411	TRANSLATION	protein_coding	-	-	1	66	0	1	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000020808	Pimreg	ENSMUST00000125655	ENSMUSP00000119424	TRANSLATION	protein_coding	stop	-	2	116	0	0	0	193.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020808	Pimreg	ENSMUST00000133880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020808	Pimreg	ENSMUST00000127369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020808	Pimreg	ENSMUST00000122871	ENSMUSP00000123099	TRANSLATION	protein_coding	stop	-	2	77	0	0	0	110.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020808	Pimreg	ENSMUST00000021164	ENSMUSP00000021164	TRANSLATION	protein_coding	-	CCDS48840.1	1	231	0	0	1.5	336.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000018387	Shroom1	ENSMUST00000155297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018387	Shroom1	ENSMUST00000109013	ENSMUSP00000104641	TRANSLATION	protein_coding	-	CCDS24680.2	1	823	0	1.4	0.5	297.1	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000018387	Shroom1	ENSMUST00000146001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018387	Shroom1	ENSMUST00000018531	ENSMUSP00000018531	TRANSLATION	protein_coding	-	CCDS70182.1	1	760	0	1.4	0.5	297.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000018387	Shroom1	ENSMUST00000093114	ENSMUSP00000090802	TRANSLATION	protein_coding	-	-	2	715	0	0.8	0	195.2	0	-4,-7	-	-	3.426	MINOR
ENSMUSG00000018387	Shroom1	ENSMUST00000109010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000753	Serpinf1	ENSMUST00000167281	ENSMUSP00000133230	TRANSLATION	nonsense_mediated_decay	start	-	3	125	0	2.75	0	53.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000753	Serpinf1	ENSMUST00000155009	ENSMUSP00000131531	TRANSLATION	protein_coding	stop	-	2	64	0	1.3	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000000753	Serpinf1	ENSMUST00000168902	ENSMUSP00000131043	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0.3	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000000753	Serpinf1	ENSMUST00000000769	ENSMUSP00000000769	TRANSLATION	protein_coding	-	CCDS25045.1	1	417	0	7.8	3.9	280.3	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000000753	Serpinf1	ENSMUST00000139403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000753	Serpinf1	ENSMUST00000125982	ENSMUSP00000126807	TRANSLATION	protein_coding	-	-	1	147	0	3.05	0	57.7	0	3,-1	-	-	0	MINOR
ENSMUSG00000000753	Serpinf1	ENSMUST00000137103	ENSMUSP00000114761	TRANSLATION	protein_coding	stop	-	3	213	0	4.8	0	98.6	0	3,-1	-	-	-1	MINOR
ENSMUSG00000000753	Serpinf1	ENSMUST00000138661	ENSMUSP00000121180	TRANSLATION	protein_coding	stop	-	3	206	0	4.8	0	95.2	0	3,-1	-	-	-1	MINOR
ENSMUSG00000020400	Tnip1	ENSMUST00000108885	ENSMUSP00000104513	TRANSLATION	protein_coding	-	CCDS56769.1	1	594	0	1.3	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020400	Tnip1	ENSMUST00000108889	ENSMUSP00000104517	TRANSLATION	protein_coding	-	CCDS24704.1	1	647	0	1.3	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020400	Tnip1	ENSMUST00000108886	ENSMUSP00000104514	TRANSLATION	protein_coding	-	CCDS56769.1	1	594	0	1.3	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020400	Tnip1	ENSMUST00000151736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020400	Tnip1	ENSMUST00000018482	ENSMUSP00000018482	TRANSLATION	protein_coding	-	CCDS24704.1	1	647	0	1.3	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020400	Tnip1	ENSMUST00000124304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020400	Tnip1	ENSMUST00000132776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020400	Tnip1	ENSMUST00000102730	ENSMUSP00000099791	TRANSLATION	protein_coding	-	CCDS70188.1	1	646	0	1.3	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020400	Tnip1	ENSMUST00000132224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020400	Tnip1	ENSMUST00000102731	ENSMUSP00000099792	TRANSLATION	protein_coding	-	CCDS24704.1	5	647	0	1.3	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020400	Tnip1	ENSMUST00000126703	ENSMUSP00000122836	TRANSLATION	protein_coding	stop	-	5	272	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020400	Tnip1	ENSMUST00000155316	ENSMUSP00000116721	TRANSLATION	protein_coding	stop	-	5	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004296	Il12b	ENSMUST00000170513	ENSMUSP00000125867	TRANSLATION	protein_coding	-	CCDS24563.1	5	335	0	5.34	1.5	76.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000004296	Il12b	ENSMUST00000102796	ENSMUSP00000099860	TRANSLATION	protein_coding	-	CCDS24563.1	1	335	0	5.34	1.5	76.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020485	Supt4a	ENSMUST00000152700	ENSMUSP00000118619	TRANSLATION	nonsense_mediated_decay	-	-	1	104	4	1.75	0	60.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020485	Supt4a	ENSMUST00000141169	ENSMUSP00000117762	TRANSLATION	nonsense_mediated_decay	-	-	1	87	4	1.9	0	60.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020485	Supt4a	ENSMUST00000093955	ENSMUSP00000091487	TRANSLATION	protein_coding	-	CCDS36270.1	1	117	4	3.5	18.3	112.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000038217	Tlcd2	ENSMUST00000153236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038217	Tlcd2	ENSMUST00000108435	ENSMUSP00000104074	TRANSLATION	protein_coding	-	CCDS70238.1	1	188	0	0	0.5	58	2	-4,-2	-	-	5.568	MINOR
ENSMUSG00000038217	Tlcd2	ENSMUST00000043598	ENSMUSP00000042958	TRANSLATION	protein_coding	-	CCDS48850.1	1	310	0	0	0.5	62.5	3	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000038217	Tlcd2	ENSMUST00000124718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017314	Mpp2	ENSMUST00000132687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017314	Mpp2	ENSMUST00000017458	ENSMUSP00000017458	TRANSLATION	protein_coding	-	CCDS25485.1	1	552	20	6.95	9.5	332.2	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000017314	Mpp2	ENSMUST00000147126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017314	Mpp2	ENSMUST00000130903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017314	Mpp2	ENSMUST00000100398	ENSMUSP00000097967	TRANSLATION	protein_coding	-	-	1	569	20	6.95	7.5	332.2	0	-4,-5	-	-	20.295	ALTERNATIVE:1
ENSMUSG00000017314	Mpp2	ENSMUST00000127522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038046	Mrm3	ENSMUST00000125463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038046	Mrm3	ENSMUST00000155526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038046	Mrm3	ENSMUST00000040577	ENSMUSP00000042882	TRANSLATION	protein_coding	-	CCDS48852.1	1	418	18	1.58	1.5	78.5	0	-1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000054406	Olfr411	ENSMUST00000080365	ENSMUSP00000079235	TRANSLATION	protein_coding	-	CCDS48846.1	-	315	0	1.32	3.9	194.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000054406	Olfr411	ENSMUST00000214769	ENSMUSP00000149978	TRANSLATION	protein_coding	-	CCDS48846.1	5	315	0	1.32	3.9	194.7	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000054406	Olfr411	ENSMUST00000141134	ENSMUSP00000145878	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	59.2	3	-4,-1	-	-	-1	MINOR
ENSMUSG00000007739	Cct4	ENSMUST00000174689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007739	Cct4	ENSMUST00000174047	ENSMUSP00000134248	TRANSLATION	nonsense_mediated_decay	-	-	5	120	5	2.5	0	71.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007739	Cct4	ENSMUST00000173853	ENSMUSP00000133677	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007739	Cct4	ENSMUST00000020562	ENSMUSP00000020562	TRANSLATION	protein_coding	-	-	5	509	22	12	0	436.6	0	-4,-7	-	-	10.062	MINOR
ENSMUSG00000007739	Cct4	ENSMUST00000174244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007739	Cct4	ENSMUST00000174659	ENSMUSP00000133667	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007739	Cct4	ENSMUST00000174746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007739	Cct4	ENSMUST00000173867	ENSMUSP00000133523	TRANSLATION	protein_coding	-	CCDS24474.1	1	539	23	13	7.2	524.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000007739	Cct4	ENSMUST00000145912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046095	Krt32	ENSMUST00000139873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046095	Krt32	ENSMUST00000107419	ENSMUSP00000103042	TRANSLATION	protein_coding	-	CCDS56805.1	1	453	0	3.62	1.5	349.4	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000078258	Gm11564	ENSMUST00000105055	ENSMUSP00000100676	TRANSLATION	protein_coding	-	CCDS70306.1	-	201	0	0	0.5	106.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020300	Cpeb4	ENSMUST00000109412	ENSMUSP00000105039	TRANSLATION	protein_coding	-	-	5	712	8	5.56	11.6	192.3	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000020300	Cpeb4	ENSMUST00000155278	ENSMUSP00000116753	TRANSLATION	protein_coding	start	-	1	392	8	5.56	0	192.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020300	Cpeb4	ENSMUST00000020543	ENSMUSP00000020543	TRANSLATION	protein_coding	-	CCDS24514.1	1	729	8	5.56	8.8	192.3	0	-4,-6	-	-	20.208	PRINCIPAL:2
ENSMUSG00000048378	Olfr1394	ENSMUST00000052668	ENSMUSP00000063062	TRANSLATION	protein_coding	-	CCDS24599.1	-	312	0	0.42	2.7	178.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048378	Olfr1394	ENSMUST00000216273	ENSMUSP00000149520	TRANSLATION	protein_coding	-	CCDS24599.1	5	312	0	0.42	2.7	178.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025576	Rbfox3	ENSMUST00000120061	ENSMUSP00000113987	TRANSLATION	protein_coding	-	-	5	327	0	3.55	0.5	207.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025576	Rbfox3	ENSMUST00000136551	ENSMUSP00000119255	TRANSLATION	protein_coding	stop	-	5	169	0	2.5	0	69.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025576	Rbfox3	ENSMUST00000154746	ENSMUSP00000118332	TRANSLATION	protein_coding	stop	-	3	145	0	2.55	0	127	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025576	Rbfox3	ENSMUST00000069343	ENSMUSP00000069598	TRANSLATION	protein_coding	-	CCDS70358.1	1	329	0	2.55	0.5	155.2	0	-4,-5	-	-	6.876	MINOR
ENSMUSG00000025576	Rbfox3	ENSMUST00000017576	ENSMUSP00000017576	TRANSLATION	protein_coding	-	CCDS25706.1	1	374	0	3.55	0.5	202.9	0	-4,-5	-	-	11.736	PRINCIPAL:4
ENSMUSG00000025576	Rbfox3	ENSMUST00000103023	ENSMUSP00000099312	TRANSLATION	protein_coding	-	CCDS25705.1	1	313	0	3.55	0.5	207.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025576	Rbfox3	ENSMUST00000134774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025576	Rbfox3	ENSMUST00000106278	ENSMUSP00000101885	TRANSLATION	protein_coding	-	CCDS25705.1	1	313	0	3.55	0.5	207.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025576	Rbfox3	ENSMUST00000117731	ENSMUSP00000113636	TRANSLATION	protein_coding	-	CCDS70360.1	1	360	0	3.55	0.5	202.9	0	-4,-5	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000025576	Rbfox3	ENSMUST00000128863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045065	9930022D16Rik	ENSMUST00000055404	ENSMUSP00000062888	TRANSLATION	protein_coding	-	-	1	128	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000046417	Lrrc75a	ENSMUST00000057194	ENSMUSP00000062489	TRANSLATION	protein_coding	-	CCDS24828.1	1	339	0	0	1.7	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000046417	Lrrc75a	ENSMUST00000143262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046417	Lrrc75a	ENSMUST00000128705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020680	Taf15	ENSMUST00000133170	ENSMUSP00000119836	TRANSLATION	protein_coding	start	-	1	324	4	4.1	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020680	Taf15	ENSMUST00000021018	ENSMUSP00000021018	TRANSLATION	protein_coding	-	CCDS25168.1	1	557	4	4.1	0.5	70.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020680	Taf15	ENSMUST00000134185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020680	Taf15	ENSMUST00000152405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020680	Taf15	ENSMUST00000126134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004668	Abca13	ENSMUST00000042740	ENSMUSP00000040465	TRANSLATION	protein_coding	-	CCDS36110.1	5	5034	21	8.18	0.5	351.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000004668	Abca13	ENSMUST00000141233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004668	Abca13	ENSMUST00000151522	ENSMUSP00000116819	TRANSLATION	protein_coding	stop	-	5	137	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000007877	Tcap	ENSMUST00000008021	ENSMUSP00000008021	TRANSLATION	protein_coding	-	CCDS25346.1	1	167	0	2	7.5	244.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034773	Hrob	ENSMUST00000140040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034773	Hrob	ENSMUST00000148867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034773	Hrob	ENSMUST00000152897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034773	Hrob	ENSMUST00000100392	ENSMUSP00000097961	TRANSLATION	protein_coding	-	CCDS36342.1	1	615	0	0	0.5	102.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034773	Hrob	ENSMUST00000133930	ENSMUSP00000137686	TRANSLATION	nonsense_mediated_decay	-	-	1	604	0	0	0	102.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020847	Rph3al	ENSMUST00000152035	ENSMUSP00000121304	TRANSLATION	protein_coding	stop	-	3	99	1	1.55	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020847	Rph3al	ENSMUST00000108420	ENSMUSP00000104058	TRANSLATION	protein_coding	-	CCDS70243.1	3	141	4	2.05	0.5	68.2	0	-4,-6	-	-	8.676	MINOR
ENSMUSG00000020847	Rph3al	ENSMUST00000121287	ENSMUSP00000113869	TRANSLATION	protein_coding	-	CCDS25058.1	5	302	8	3.4	2.7	128.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020847	Rph3al	ENSMUST00000021208	ENSMUSP00000021208	TRANSLATION	protein_coding	-	CCDS70243.1	1	141	4	2.05	0.5	68.2	0	-4,-6	-	-	8.676	MINOR
ENSMUSG00000020847	Rph3al	ENSMUST00000066504	ENSMUSP00000064202	TRANSLATION	protein_coding	-	CCDS25058.1	1	302	8	3.4	2.7	128.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000043857	Mgat5b	ENSMUST00000103027	ENSMUSP00000099316	TRANSLATION	protein_coding	-	CCDS25682.1	5	792	0	0	2.7	883.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043857	Mgat5b	ENSMUST00000126757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043857	Mgat5b	ENSMUST00000139905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043857	Mgat5b	ENSMUST00000136584	ENSMUSP00000122276	TRANSLATION	protein_coding	start/stop	-	3	214	0	0	0	376.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025165	Sectm1a	ENSMUST00000106120	ENSMUSP00000101726	TRANSLATION	protein_coding	-	-	5	174	0	0	0	0	1	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000025165	Sectm1a	ENSMUST00000100126	ENSMUSP00000097702	TRANSLATION	protein_coding	-	-	1	65	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000025165	Sectm1a	ENSMUST00000106119	ENSMUSP00000101725	TRANSLATION	protein_coding	-	-	1	89	0	0	0	0	1	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000025165	Sectm1a	ENSMUST00000026162	ENSMUSP00000026162	TRANSLATION	protein_coding	-	CCDS25766.1	1	192	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000025165	Sectm1a	ENSMUST00000149917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054079	Utp18	ENSMUST00000134807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054079	Utp18	ENSMUST00000130797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054079	Utp18	ENSMUST00000066888	ENSMUSP00000068103	TRANSLATION	protein_coding	-	CCDS25245.1	1	552	0	4.28	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000023764	Sfi1	ENSMUST00000156655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023764	Sfi1	ENSMUST00000132893	ENSMUSP00000118419	TRANSLATION	nonsense_mediated_decay	-	-	5	365	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023764	Sfi1	ENSMUST00000146888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000137633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000133882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023764	Sfi1	ENSMUST00000138126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000144359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000101655	ENSMUSP00000099178	TRANSLATION	protein_coding	-	-	5	1205	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000023764	Sfi1	ENSMUST00000126746	ENSMUSP00000122002	TRANSLATION	nonsense_mediated_decay	start	-	5	376	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023764	Sfi1	ENSMUST00000143442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023764	Sfi1	ENSMUST00000153425	ENSMUSP00000121719	TRANSLATION	protein_coding	-	-	5	1174	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000023764	Sfi1	ENSMUST00000144778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000066391	ENSMUSP00000067261	TRANSLATION	protein_coding	-	-	5	1184	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000023764	Sfi1	ENSMUST00000141422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023764	Sfi1	ENSMUST00000081318	ENSMUSP00000080066	TRANSLATION	protein_coding	-	CCDS36094.1	1	1216	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000023764	Sfi1	ENSMUST00000144447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023764	Sfi1	ENSMUST00000142315	ENSMUSP00000118364	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023764	Sfi1	ENSMUST00000118627	ENSMUSP00000113559	TRANSLATION	protein_coding	-	-	1	90	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000023764	Sfi1	ENSMUST00000140846	ENSMUSP00000119905	TRANSLATION	protein_coding	-	-	5	1124	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000023764	Sfi1	ENSMUST00000155763	ENSMUSP00000116369	TRANSLATION	protein_coding	start/stop	-	5	151	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048076	Arf1	ENSMUST00000061242	ENSMUSP00000079905	TRANSLATION	protein_coding	-	CCDS24765.1	1	181	19	4	21.5	263.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000048076	Arf1	ENSMUST00000163300	ENSMUSP00000126120	TRANSLATION	protein_coding	-	CCDS24765.1	1	181	19	4	21.5	263.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000098456	Gm12117	ENSMUST00000184486	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000098456	Gm12117	ENSMUST00000183831	ENSMUSP00000139186	TRANSLATION	protein_coding	-	-	-	151	7	1	0	155.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001891	Ugp2	ENSMUST00000133343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001891	Ugp2	ENSMUST00000143890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001891	Ugp2	ENSMUST00000102875	ENSMUSP00000099939	TRANSLATION	protein_coding	-	CCDS24464.1	1	508	19	9.33	17	660.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000001891	Ugp2	ENSMUST00000060895	ENSMUSP00000056324	TRANSLATION	protein_coding	-	CCDS70148.1	1	497	19	9	13.7	660.1	0	-4,-5	-	-	20.516	MINOR
ENSMUSG00000040481	Bptf	ENSMUST00000147816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040481	Bptf	ENSMUST00000106763	ENSMUSP00000102374	TRANSLATION	protein_coding	-	-	5	3036	8	3.082	0	270.1	0	-4,-2	-	-	12.132	ALTERNATIVE:2
ENSMUSG00000040481	Bptf	ENSMUST00000057892	ENSMUSP00000052303	TRANSLATION	protein_coding	-	CCDS48964.1	5	2921	8	3.082	0.5	270.1	0	-4,-2	-	-	12.132	PRINCIPAL:2
ENSMUSG00000040481	Bptf	ENSMUST00000133317	ENSMUSP00000118875	TRANSLATION	protein_coding	start	-	2	158	2	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040481	Bptf	ENSMUST00000106762	ENSMUSP00000102373	TRANSLATION	protein_coding	-	-	5	2973	8	3.082	0	270.1	0	-4,-2	-	-	12.132	ALTERNATIVE:2
ENSMUSG00000040481	Bptf	ENSMUST00000138443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040481	Bptf	ENSMUST00000149486	ENSMUSP00000122575	TRANSLATION	protein_coding	start/stop	-	5	289	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040481	Bptf	ENSMUST00000208369	ENSMUSP00000146600	TRANSLATION	protein_coding	start	-	1	329	16	3.35	0	172.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025138	Sirt7	ENSMUST00000134255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000153018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000127882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000106183	ENSMUSP00000101789	TRANSLATION	protein_coding	-	-	3	121	7	3.198	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000025138	Sirt7	ENSMUST00000153532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000154714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025138	Sirt7	ENSMUST00000130743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000133625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025138	Sirt7	ENSMUST00000146809	ENSMUSP00000120405	TRANSLATION	protein_coding	start	-	5	195	14	2.11	0	35.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025138	Sirt7	ENSMUST00000080202	ENSMUSP00000079093	TRANSLATION	protein_coding	-	CCDS49006.1	1	402	31	7.22	5.3	72.5	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000025138	Sirt7	ENSMUST00000152331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060030	Olfr317	ENSMUST00000216196	ENSMUSP00000150027	TRANSLATION	protein_coding	-	CCDS24742.1	5	327	0	0.36	1.5	170.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060030	Olfr317	ENSMUST00000215513	ENSMUSP00000150575	TRANSLATION	protein_coding	-	CCDS24742.1	5	327	0	0.36	1.5	170.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060030	Olfr317	ENSMUST00000075607	ENSMUSP00000075034	TRANSLATION	protein_coding	-	CCDS24742.1	-	327	0	0.36	1.5	170.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020349	Ppp2ca	ENSMUST00000020608	ENSMUSP00000020608	TRANSLATION	protein_coding	-	CCDS24666.1	1	309	10	6.75	19.5	119.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020349	Ppp2ca	ENSMUST00000142939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017428	Psmd11	ENSMUST00000148895	ENSMUSP00000134083	TRANSLATION	protein_coding	start	-	5	209	0	5.83	0	66.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000174743	ENSMUSP00000133442	TRANSLATION	nonsense_mediated_decay	start	-	5	89	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000017572	ENSMUSP00000017572	TRANSLATION	protein_coding	-	CCDS25133.1	1	422	0	12.65	16.5	75.1	0	-4,-5	-	-	15.76	PRINCIPAL:1
ENSMUSG00000017428	Psmd11	ENSMUST00000173797	ENSMUSP00000133739	TRANSLATION	protein_coding	start	-	5	160	0	4.25	0	78.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000173060	ENSMUSP00000133509	TRANSLATION	nonsense_mediated_decay	start	-	5	100	0	3.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000129500	ENSMUSP00000133452	TRANSLATION	protein_coding	start	-	3	158	0	4.08	0	43.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000172847	ENSMUSP00000134136	TRANSLATION	nonsense_mediated_decay	start	-	5	100	0	3.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000125591	ENSMUSP00000134320	TRANSLATION	nonsense_mediated_decay	start	-	2	95	0	2.02	0	37	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000172641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017428	Psmd11	ENSMUST00000147898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017428	Psmd11	ENSMUST00000173565	ENSMUSP00000134326	TRANSLATION	protein_coding	stop	-	3	114	0	3.99	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000173186	ENSMUSP00000133572	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000172773	ENSMUSP00000134096	TRANSLATION	nonsense_mediated_decay	-	-	5	113	0	3.608	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000172615	ENSMUSP00000134129	TRANSLATION	nonsense_mediated_decay	-	-	5	116	0	3.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017428	Psmd11	ENSMUST00000173938	ENSMUSP00000133571	TRANSLATION	protein_coding	-	CCDS25133.1	1	422	0	12.65	16.5	75.1	0	-4,-5	-	-	15.76	PRINCIPAL:1
ENSMUSG00000046756	Mrps7	ENSMUST00000058109	ENSMUSP00000053033	TRANSLATION	protein_coding	-	CCDS25642.1	1	242	0	4.5	2.9	131.6	0	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000046756	Mrps7	ENSMUST00000141556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020883	Fbxl20	ENSMUST00000148473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020883	Fbxl20	ENSMUST00000146399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020883	Fbxl20	ENSMUST00000135969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020883	Fbxl20	ENSMUST00000147971	ENSMUSP00000123507	TRANSLATION	protein_coding	start	-	2	142	0	2.05	0	11.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020883	Fbxl20	ENSMUST00000149327	ENSMUSP00000120709	TRANSLATION	protein_coding	stop	-	2	110	0	2.27	0	50.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020883	Fbxl20	ENSMUST00000103143	ENSMUSP00000099432	TRANSLATION	protein_coding	-	CCDS25339.1	1	436	0	7.458	14.3	108.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020883	Fbxl20	ENSMUST00000150378	ENSMUSP00000119003	TRANSLATION	protein_coding	stop	-	5	210	0	3.88	0	78.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058287	Gm12253	ENSMUST00000108825	ENSMUSP00000104453	TRANSLATION	protein_coding	-	CCDS36164.1	5	229	0	1.12	0.5	0	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000020836	Coro6	ENSMUST00000102493	ENSMUSP00000099551	TRANSLATION	protein_coding	-	CCDS25079.1	5	471	0	9	9.6	241.7	0	-4,-1	-	-	15	ALTERNATIVE:1
ENSMUSG00000020836	Coro6	ENSMUST00000052515	ENSMUSP00000056862	TRANSLATION	protein_coding	-	-	1	432	0	8	2.7	241.7	0	-4,-1	-	-	10.596	MINOR
ENSMUSG00000020836	Coro6	ENSMUST00000079770	ENSMUSP00000078703	TRANSLATION	protein_coding	-	CCDS25078.1	1	431	0	8	2.7	241.7	0	-4,-1	-	-	10.596	MINOR
ENSMUSG00000020836	Coro6	ENSMUST00000108391	ENSMUSP00000104028	TRANSLATION	protein_coding	-	CCDS25079.1	1	471	0	9	9.6	241.7	0	-4,-1	-	-	15	ALTERNATIVE:1
ENSMUSG00000020836	Coro6	ENSMUST00000130255	ENSMUSP00000120232	TRANSLATION	protein_coding	stop	-	3	14	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020836	Coro6	ENSMUST00000021190	ENSMUSP00000021190	TRANSLATION	protein_coding	-	CCDS25077.1	1	471	0	9	9.6	241.7	0	-4,-1	-	-	15	PRINCIPAL:5
ENSMUSG00000025572	Tmc6	ENSMUST00000103025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025572	Tmc6	ENSMUST00000127227	ENSMUSP00000116613	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000149589	ENSMUSP00000116521	TRANSLATION	nonsense_mediated_decay	start	-	3	111	0	0	0	36	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000143406	ENSMUSP00000117566	TRANSLATION	protein_coding	stop	-	5	253	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000131606	ENSMUSP00000123264	TRANSLATION	nonsense_mediated_decay	-	-	1	152	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000026659	ENSMUSP00000026659	TRANSLATION	protein_coding	-	CCDS25687.1	1	810	0	0	0.5	127.6	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025572	Tmc6	ENSMUST00000152304	ENSMUSP00000122495	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000136729	ENSMUSP00000118068	TRANSLATION	protein_coding	stop	-	2	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025572	Tmc6	ENSMUST00000148220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005947	Itgae	ENSMUST00000102537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005947	Itgae	ENSMUST00000006101	ENSMUSP00000006101	TRANSLATION	protein_coding	-	CCDS24995.1	1	1167	22	12.415	1.5	292.2	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000044052	Ccr10	ENSMUST00000062759	ENSMUSP00000062588	TRANSLATION	protein_coding	-	CCDS25454.1	1	362	0	0.64	5.1	142.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059439	Bcas3	ENSMUST00000145281	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059439	Bcas3	ENSMUST00000140562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059439	Bcas3	ENSMUST00000108061	ENSMUSP00000103696	TRANSLATION	protein_coding	-	-	5	943	0	0	1.2	90.2	0	-4,-7	-	-	5.679	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000130343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059439	Bcas3	ENSMUST00000140215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059439	Bcas3	ENSMUST00000154396	ENSMUSP00000122154	TRANSLATION	protein_coding	start	-	5	693	0	0	0	96.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000108062	ENSMUSP00000103697	TRANSLATION	protein_coding	-	-	5	943	0	0	1.2	90.2	0	-4,-7	-	-	5.679	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000142596	ENSMUSP00000122571	TRANSLATION	protein_coding	start	-	5	477	0	0	0	90.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000108056	ENSMUSP00000103691	TRANSLATION	protein_coding	-	-	1	527	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000092821	ENSMUSP00000090496	TRANSLATION	protein_coding	-	CCDS48873.1	1	913	0	0	2.9	96.5	0	-4,-7	-	-	6.655	PRINCIPAL:1
ENSMUSG00000059439	Bcas3	ENSMUST00000092822	ENSMUSP00000090497	TRANSLATION	protein_coding	start	-	5	458	0	0	0	96.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000149662	ENSMUSP00000120891	TRANSLATION	protein_coding	start	-	1	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000144276	ENSMUSP00000114415	TRANSLATION	protein_coding	start	-	3	165	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000074875	ENSMUSP00000074416	TRANSLATION	protein_coding	-	CCDS25195.1	5	928	0	0	3.9	90.2	0	-4,-7	-	-	6.61	MINOR
ENSMUSG00000059439	Bcas3	ENSMUST00000133194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059439	Bcas3	ENSMUST00000138423	ENSMUSP00000117559	TRANSLATION	protein_coding	stop	-	5	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010086	Rnf112	ENSMUST00000136966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010086	Rnf112	ENSMUST00000060255	ENSMUSP00000059903	TRANSLATION	protein_coding	-	-	1	679	19	4.605	0.5	88.5	0	-4,0	-	-	18	MINOR
ENSMUSG00000010086	Rnf112	ENSMUST00000126859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010086	Rnf112	ENSMUST00000102661	ENSMUSP00000099722	TRANSLATION	protein_coding	-	CCDS78960.1	1	631	19	4.305	5.1	88.5	0	-4,-1	-	-	19.4	PRINCIPAL:1
ENSMUSG00000010086	Rnf112	ENSMUST00000152137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010086	Rnf112	ENSMUST00000130648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010086	Rnf112	ENSMUST00000054927	ENSMUSP00000056464	TRANSLATION	protein_coding	-	CCDS24812.1	1	654	19	4.305	0.5	88.5	0	-4,0	-	-	17.4	MINOR
ENSMUSG00000018809	Smyd4	ENSMUST00000145888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018809	Smyd4	ENSMUST00000157055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018809	Smyd4	ENSMUST00000044530	ENSMUSP00000047505	TRANSLATION	protein_coding	-	CCDS48848.1	1	799	28	2.2	2.7	101.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018809	Smyd4	ENSMUST00000135774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060756	Krtap2-4	ENSMUST00000074926	ENSMUSP00000074461	TRANSLATION	protein_coding	-	CCDS48911.1	-	131	0	0	5.1	38.2	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000078262	Krtap4-9	ENSMUST00000105059	ENSMUSP00000100680	TRANSLATION	protein_coding	-	CCDS48917.1	-	244	0	0	0.5	133.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048442	Smim5	ENSMUST00000142089	ENSMUSP00000138928	TRANSLATION	protein_coding	-	CCDS70347.1	1	78	0	0	5.2	80.7	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000048442	Smim5	ENSMUST00000131566	ENSMUSP00000139287	TRANSLATION	protein_coding	-	-	2	51	0	0	0	45.5	0	-4,-5	-	-	3.384	MINOR
ENSMUSG00000048442	Smim5	ENSMUST00000152171	ENSMUSP00000139148	TRANSLATION	protein_coding	-	CCDS70347.1	1	78	0	0	5.2	80.7	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000141331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000010421	ENSMUSP00000010421	TRANSLATION	protein_coding	-	CCDS25097.1	1	2234	0	0	0.5	660.5	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000132756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000147432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000126928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000145145	ENSMUSP00000119105	TRANSLATION	nonsense_mediated_decay	start	-	3	97	0	0	0	54.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000136184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010277	2610507B11Rik	ENSMUST00000125459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040283	Btnl9	ENSMUST00000046522	ENSMUSP00000046229	TRANSLATION	protein_coding	-	CCDS24600.1	1	536	0	3.792	0.5	152	2	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040283	Btnl9	ENSMUST00000131363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040283	Btnl9	ENSMUST00000153999	ENSMUSP00000120530	TRANSLATION	protein_coding	stop	-	5	205	0	1.2	0	44.2	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000040283	Btnl9	ENSMUST00000066531	ENSMUSP00000066598	TRANSLATION	protein_coding	-	-	1	621	0	3.462	0	133.2	2	-2,-5	-	-	10.212	MINOR
ENSMUSG00000040283	Btnl9	ENSMUST00000128462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001100	Poldip2	ENSMUST00000151499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001100	Poldip2	ENSMUST00000133601	ENSMUSP00000127708	TRANSLATION	nonsense_mediated_decay	start	-	5	284	0	1.366	0	100.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001100	Poldip2	ENSMUST00000147930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001100	Poldip2	ENSMUST00000001127	ENSMUSP00000001127	TRANSLATION	protein_coding	-	CCDS25109.1	1	368	0	2.346	5.3	142.3	0	-2,2	-	-	14	PRINCIPAL:1
ENSMUSG00000001100	Poldip2	ENSMUST00000156754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001100	Poldip2	ENSMUST00000136284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025573	6030468B19Rik	ENSMUST00000106331	ENSMUSP00000101938	TRANSLATION	protein_coding	-	CCDS48992.1	1	252	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000070438	Olfr313	ENSMUST00000082220	ENSMUSP00000080852	TRANSLATION	protein_coding	-	CCDS24748.1	-	308	0	0.2	1.5	174.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000070438	Olfr313	ENSMUST00000217506	ENSMUSP00000150529	TRANSLATION	protein_coding	-	CCDS24748.1	5	308	0	0.2	1.5	174.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035352	Ccl12	ENSMUST00000124916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035352	Ccl12	ENSMUST00000000194	ENSMUSP00000000194	TRANSLATION	protein_coding	-	CCDS36247.1	1	104	0	2	0.5	79	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000015869	Prpsap1	ENSMUST00000130835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015869	Prpsap1	ENSMUST00000135196	ENSMUSP00000119576	TRANSLATION	protein_coding	stop	-	3	195	4	4.25	0	128.5	0	-1,2	-	-	-1	MINOR
ENSMUSG00000015869	Prpsap1	ENSMUST00000152496	ENSMUSP00000115982	TRANSLATION	protein_coding	stop	-	3	175	4	4.05	0	119.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015869	Prpsap1	ENSMUST00000147858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015869	Prpsap1	ENSMUST00000140917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015869	Prpsap1	ENSMUST00000142480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015869	Prpsap1	ENSMUST00000106391	ENSMUSP00000101999	TRANSLATION	protein_coding	-	CCDS48985.1	1	385	14	8.5	1.5	464.5	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000015869	Prpsap1	ENSMUST00000152874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015869	Prpsap1	ENSMUST00000144154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053654	Krt42	ENSMUST00000017270	ENSMUSP00000017270	TRANSLATION	protein_coding	-	CCDS25416.1	1	452	0	4.46	5.2	412.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000053654	Krt42	ENSMUST00000107406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003934	Efnb3	ENSMUST00000004036	ENSMUSP00000004036	TRANSLATION	protein_coding	-	CCDS24896.1	1	340	0	2.8	3.9	145.5	0	1,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000034156	Tspoap1	ENSMUST00000100644	ENSMUSP00000098209	TRANSLATION	protein_coding	-	-	5	1786	0	10.765	0	138.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034156	Tspoap1	ENSMUST00000154758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034156	Tspoap1	ENSMUST00000148422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034156	Tspoap1	ENSMUST00000148814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034156	Tspoap1	ENSMUST00000135957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034156	Tspoap1	ENSMUST00000153578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034156	Tspoap1	ENSMUST00000142329	ENSMUSP00000118819	TRANSLATION	protein_coding	start	-	1	384	0	5.25	0	98.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034156	Tspoap1	ENSMUST00000144502	ENSMUSP00000122665	TRANSLATION	protein_coding	start/stop	-	5	251	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034156	Tspoap1	ENSMUST00000039627	ENSMUSP00000048063	TRANSLATION	protein_coding	-	CCDS48879.1	5	1846	0	10.765	1.5	138.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000034156	Tspoap1	ENSMUST00000133645	ENSMUSP00000117356	TRANSLATION	protein_coding	start/stop	-	5	169	0	2.75	0	48.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000092777	ENSMUSP00000090452	TRANSLATION	protein_coding	-	CCDS36282.1	1	1169	0	1.83	1.5	102.5	1	-1,-5	-	-	5.511	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000041956	ENSMUSP00000042271	TRANSLATION	protein_coding	-	CCDS25248.1	1	1307	0	1.83	7.5	297.1	0	-4,-5	-	-	14.28	PRINCIPAL:1
ENSMUSG00000020859	Spag9	ENSMUST00000132772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020859	Spag9	ENSMUST00000075695	ENSMUSP00000075115	TRANSLATION	protein_coding	-	CCDS56797.1	1	1168	0	1.83	7.5	101.2	1	-1,-5	-	-	8.28	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000138154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020859	Spag9	ENSMUST00000103168	ENSMUSP00000099457	TRANSLATION	protein_coding	-	CCDS25249.1	1	1164	0	1.83	7.5	101.5	1	-1,-5	-	-	8.28	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000156019	ENSMUSP00000115864	TRANSLATION	protein_coding	start/stop	-	5	775	0	1.83	0	101.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000132605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020859	Spag9	ENSMUST00000127066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020859	Spag9	ENSMUST00000153076	ENSMUSP00000117502	TRANSLATION	protein_coding	start	-	1	901	0	1	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000132079	ENSMUSP00000118850	TRANSLATION	protein_coding	stop	-	5	706	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000020859	Spag9	ENSMUST00000024979	ENSMUSP00000024979	TRANSLATION	protein_coding	-	-	5	1169	0	2.08	5.1	101.1	1	-1,-5	-	-	7.893	MINOR
ENSMUSG00000050087	Cby3	ENSMUST00000164067	ENSMUSP00000131004	TRANSLATION	protein_coding	-	-	5	235	0	0	0	120.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050087	Cby3	ENSMUST00000052596	ENSMUSP00000052281	TRANSLATION	protein_coding	-	-	1	140	0	0	0	96.1	0	-4,-6	-	-	4.536	MINOR
ENSMUSG00000034239	Gm884	ENSMUST00000059279	ENSMUSP00000058511	TRANSLATION	protein_coding	-	-	1	3643	0	4.02	0	1396.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034239	Gm884	ENSMUST00000167262	ENSMUSP00000129662	TRANSLATION	protein_coding	-	CCDS48952.1	1	1467	0	4.02	0.5	479	0	-4,-5	-	-	6	MINOR
ENSMUSG00000045374	Wdr81	ENSMUST00000173320	ENSMUSP00000134266	TRANSLATION	protein_coding	-	CCDS48849.1	5	1934	0	1.6	0.5	158	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000045374	Wdr81	ENSMUST00000132442	ENSMUSP00000120605	TRANSLATION	protein_coding	start	-	1	756	0	1.12	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045374	Wdr81	ENSMUST00000117392	ENSMUSP00000113939	TRANSLATION	protein_coding	start	-	5	1934	0	1.6	0.5	158	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000045374	Wdr81	ENSMUST00000135804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018500	Adora2b	ENSMUST00000018644	ENSMUSP00000018644	TRANSLATION	protein_coding	-	CCDS24822.1	1	332	0	1.7	6.3	182.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032615	Nt5m	ENSMUST00000137695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032615	Nt5m	ENSMUST00000149076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032615	Nt5m	ENSMUST00000102695	ENSMUSP00000099756	TRANSLATION	protein_coding	-	CCDS24779.1	1	220	6	4.75	1.5	93.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000032615	Nt5m	ENSMUST00000154699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042826	Fgf11	ENSMUST00000011285	ENSMUSP00000011285	TRANSLATION	protein_coding	-	CCDS70218.1	1	197	0	4.75	2.9	60.5	0	-4,-2	-	-	7.05	MINOR
ENSMUSG00000042826	Fgf11	ENSMUST00000102585	ENSMUSP00000099645	TRANSLATION	protein_coding	-	CCDS24911.1	1	225	0	5.5	7.5	132.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000038352	Arl5c	ENSMUST00000107563	ENSMUSP00000103188	TRANSLATION	protein_coding	-	-	1	98	10	2.25	0	95	0	-4,-7	-	-	3.03	MINOR
ENSMUSG00000038352	Arl5c	ENSMUST00000042971	ENSMUSP00000037214	TRANSLATION	protein_coding	-	CCDS25334.1	1	179	17	4.4	19.5	204.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000070377	Olfr43	ENSMUST00000206743	ENSMUSP00000146125	TRANSLATION	protein_coding	stop	-	3	107	0	0.2	0	62.8	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000070377	Olfr43	ENSMUST00000078936	ENSMUSP00000077966	TRANSLATION	protein_coding	-	CCDS25028.1	-	313	0	0.84	5.3	198.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000070377	Olfr43	ENSMUST00000205664	ENSMUSP00000145822	TRANSLATION	protein_coding	-	CCDS25028.1	3	313	0	0.84	5.3	198.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000070377	Olfr43	ENSMUST00000215550	ENSMUSP00000150560	TRANSLATION	protein_coding	-	CCDS25028.1	3	313	0	0.84	5.3	198.3	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000034449	Dhrs11	ENSMUST00000047560	ENSMUSP00000043467	TRANSLATION	protein_coding	-	CCDS36261.1	1	260	29	6.75	3.9	153.5	0	-3,0	-	-	19	PRINCIPAL:1
ENSMUSG00000034449	Dhrs11	ENSMUST00000151496	ENSMUSP00000122267	TRANSLATION	nonsense_mediated_decay	-	-	3	50	8	1	0	32.9	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000004798	Ulk2	ENSMUST00000129025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004798	Ulk2	ENSMUST00000004920	ENSMUSP00000004920	TRANSLATION	protein_coding	-	CCDS24820.1	1	1037	18	8.38	6.3	317.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004798	Ulk2	ENSMUST00000157049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057322	Rpl38	ENSMUST00000106599	ENSMUSP00000102209	TRANSLATION	protein_coding	-	CCDS36365.1	1	70	0	0	19.5	128.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057322	Rpl38	ENSMUST00000077915	ENSMUSP00000102211	TRANSLATION	protein_coding	-	CCDS36365.1	1	70	0	0	19.5	128.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057322	Rpl38	ENSMUST00000106602	ENSMUSP00000102213	TRANSLATION	protein_coding	-	CCDS36365.1	1	70	0	0	19.5	128.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000057322	Rpl38	ENSMUST00000082092	ENSMUSP00000080741	TRANSLATION	protein_coding	-	CCDS36365.1	2	70	0	0	19.5	128.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020783	Ncbp3	ENSMUST00000151823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020783	Ncbp3	ENSMUST00000144262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020783	Ncbp3	ENSMUST00000021135	ENSMUSP00000021135	TRANSLATION	protein_coding	-	CCDS24994.1	1	615	0	0	1.7	72.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000003949	Hlf	ENSMUST00000145786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003949	Hlf	ENSMUST00000176001	ENSMUSP00000135463	TRANSLATION	protein_coding	start	-	2	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003949	Hlf	ENSMUST00000004051	ENSMUSP00000004051	TRANSLATION	protein_coding	-	CCDS25241.1	1	295	0	0.8	10.8	62.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000003949	Hlf	ENSMUST00000043658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003949	Hlf	ENSMUST00000107881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003949	Hlf	ENSMUST00000137957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034120	Srsf2	ENSMUST00000136914	ENSMUSP00000120086	TRANSLATION	nonsense_mediated_decay	-	-	2	221	0	1	14.8	77.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034120	Srsf2	ENSMUST00000176834	ENSMUSP00000134907	TRANSLATION	nonsense_mediated_decay	start	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034120	Srsf2	ENSMUST00000138484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034120	Srsf2	ENSMUST00000092404	ENSMUSP00000090059	TRANSLATION	protein_coding	-	CCDS25680.1	1	221	0	1	14.8	77.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034120	Srsf2	ENSMUST00000190993	ENSMUSP00000140016	TRANSLATION	protein_coding	-	CCDS25680.1	2	221	0	1	14.8	77.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034120	Srsf2	ENSMUST00000177429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020946	Gosr2	ENSMUST00000145265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020946	Gosr2	ENSMUST00000107013	ENSMUSP00000102627	TRANSLATION	protein_coding	-	-	2	165	0	0	15	0	1	-4,-5	-	-	3.028	MINOR
ENSMUSG00000020946	Gosr2	ENSMUST00000021329	ENSMUSP00000021329	TRANSLATION	protein_coding	-	CCDS25521.1	1	212	0	0	19.5	55.7	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000017615	Tnfaip1	ENSMUST00000017759	ENSMUSP00000017759	TRANSLATION	protein_coding	-	CCDS25110.1	1	316	0	2.6	11	73.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000017615	Tnfaip1	ENSMUST00000108277	ENSMUSP00000103912	TRANSLATION	protein_coding	-	CCDS25110.1	1	316	0	2.6	11	73.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034282	Evpl	ENSMUST00000037007	ENSMUSP00000037850	TRANSLATION	protein_coding	-	CCDS25661.1	2	2035	0	8.6	0.5	98.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056342	Usp34	ENSMUST00000137823	ENSMUSP00000120747	TRANSLATION	protein_coding	start	-	5	3602	7	5.49	0	146.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056342	Usp34	ENSMUST00000125701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056342	Usp34	ENSMUST00000129521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056342	Usp34	ENSMUST00000180046	ENSMUSP00000137430	TRANSLATION	protein_coding	-	CCDS56763.1	5	3582	7	5.49	0.5	146.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056342	Usp34	ENSMUST00000130131	ENSMUSP00000115168	TRANSLATION	protein_coding	start	-	5	810	7	5.49	0	146.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056342	Usp34	ENSMUST00000129368	ENSMUSP00000121426	TRANSLATION	protein_coding	start/stop	-	5	288	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056342	Usp34	ENSMUST00000148927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056342	Usp34	ENSMUST00000155984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063116	Olfr410	ENSMUST00000213831	ENSMUSP00000150765	TRANSLATION	protein_coding	-	CCDS25030.1	5	315	0	0.36	7.5	178.6	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000063116	Olfr410	ENSMUST00000052254	ENSMUSP00000050456	TRANSLATION	protein_coding	-	CCDS25030.1	-	315	0	0.36	7.5	178.6	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000063116	Olfr410	ENSMUST00000214490	ENSMUSP00000150291	TRANSLATION	protein_coding	-	CCDS25030.1	5	315	0	0.36	7.5	178.6	6	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000059729	Olfr1385	ENSMUST00000071807	ENSMUSP00000071710	TRANSLATION	protein_coding	-	CCDS24612.1	-	309	0	0.32	3.9	157	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000059729	Olfr1385	ENSMUST00000216450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059729	Olfr1385	ENSMUST00000214948	ENSMUSP00000150035	TRANSLATION	protein_coding	-	CCDS24612.1	5	309	0	0.32	3.9	157	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000049396	Gemin4	ENSMUST00000143822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049396	Gemin4	ENSMUST00000102500	ENSMUSP00000099558	TRANSLATION	protein_coding	-	CCDS25061.1	1	1058	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000020776	Fbf1	ENSMUST00000124828	ENSMUSP00000114558	TRANSLATION	protein_coding	stop	-	1	227	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020776	Fbf1	ENSMUST00000136073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020776	Fbf1	ENSMUST00000148350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000136318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000143038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000106435	ENSMUSP00000102043	TRANSLATION	protein_coding	-	CCDS25659.1	1	1173	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020776	Fbf1	ENSMUST00000103031	ENSMUSP00000099320	TRANSLATION	protein_coding	-	CCDS25659.1	5	1173	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020776	Fbf1	ENSMUST00000150703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000126861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000125980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020776	Fbf1	ENSMUST00000139020	ENSMUSP00000114893	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020776	Fbf1	ENSMUST00000131521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000135605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000129575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000045402	ENSMUSP00000048675	TRANSLATION	protein_coding	-	CCDS49000.1	1	1082	0	0	0.5	178.6	15	-4,-5	-	-	5.508	ALTERNATIVE:2
ENSMUSG00000061306	Slc38a10	ENSMUST00000053692	ENSMUSP00000057615	TRANSLATION	protein_coding	-	CCDS49002.1	1	428	0	0	0.5	185.9	14	-4,-5	-	-	5.946	ALTERNATIVE:2
ENSMUSG00000061306	Slc38a10	ENSMUST00000124997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000150315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000129128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000179094	ENSMUSP00000136719	TRANSLATION	protein_coding	-	-	5	1090	0	0	0	178.6	15	-4,-5	-	-	5.508	ALTERNATIVE:2
ENSMUSG00000061306	Slc38a10	ENSMUST00000152859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000076697	ENSMUSP00000075989	TRANSLATION	protein_coding	-	CCDS49001.1	1	408	0	0	0.5	186.8	14	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000061306	Slc38a10	ENSMUST00000154444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000129710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000146641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000103018	ENSMUSP00000099307	TRANSLATION	protein_coding	-	CCDS25728.1	1	1090	0	0	0.5	178.6	15	-4,-5	-	-	5.508	PRINCIPAL:3
ENSMUSG00000061306	Slc38a10	ENSMUST00000148503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061306	Slc38a10	ENSMUST00000132239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047253	Krtap1-5	ENSMUST00000054532	ENSMUSP00000053312	TRANSLATION	protein_coding	-	CCDS25388.1	-	122	0	0	0.5	135.6	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025153	Fasn	ENSMUST00000206589	ENSMUSP00000145585	TRANSLATION	protein_coding	-	-	5	2502	40	41.7	1.5	1359.3	0	-4,-5	-	-	17.91	ALTERNATIVE:2
ENSMUSG00000025153	Fasn	ENSMUST00000055655	ENSMUSP00000052872	TRANSLATION	protein_coding	-	CCDS25759.1	1	2504	40	41.7	1.5	1360.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000025153	Fasn	ENSMUST00000206637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025153	Fasn	ENSMUST00000146541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025153	Fasn	ENSMUST00000205905	ENSMUSP00000146068	TRANSLATION	protein_coding	stop	-	3	24	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025153	Fasn	ENSMUST00000155276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002814	Top3a	ENSMUST00000002891	ENSMUSP00000002891	TRANSLATION	protein_coding	-	CCDS24797.1	1	1003	3	17.91	0.5	633.5	0	-4,0	-	-	15	PRINCIPAL:2
ENSMUSG00000002814	Top3a	ENSMUST00000124799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002814	Top3a	ENSMUST00000130068	ENSMUSP00000115727	TRANSLATION	protein_coding	stop	-	3	85	1	2.5	0	23	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002814	Top3a	ENSMUST00000117743	ENSMUSP00000113057	TRANSLATION	protein_coding	-	-	1	773	3	17	0	491.6	0	-4,-5	-	-	7.182	MINOR
ENSMUSG00000002814	Top3a	ENSMUST00000120417	ENSMUSP00000113653	TRANSLATION	protein_coding	-	-	5	670	3	15.448	0	484.2	0	-4,-5	-	-	4.074	MINOR
ENSMUSG00000002814	Top3a	ENSMUST00000102668	ENSMUSP00000099729	TRANSLATION	protein_coding	-	-	1	954	3	17.91	0	633.5	0	-4,0	-	-	15	ALTERNATIVE:2
ENSMUSG00000017146	Brca1	ENSMUST00000131460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017146	Brca1	ENSMUST00000191198	ENSMUSP00000139737	TRANSLATION	protein_coding	start/stop	-	3	177	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017146	Brca1	ENSMUST00000190862	ENSMUSP00000139599	TRANSLATION	protein_coding	stop	-	5	79	2	1.9	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000017146	Brca1	ENSMUST00000017290	ENSMUSP00000017290	TRANSLATION	protein_coding	-	CCDS25474.1	1	1812	9	9.35	0.5	329.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017146	Brca1	ENSMUST00000156843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017146	Brca1	ENSMUST00000188168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017146	Brca1	ENSMUST00000142086	ENSMUSP00000139813	TRANSLATION	nonsense_mediated_decay	-	-	1	75	9	2	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020159	Gabrp	ENSMUST00000135350	ENSMUSP00000120500	TRANSLATION	protein_coding	stop	-	2	58	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000020159	Gabrp	ENSMUST00000020366	ENSMUSP00000020366	TRANSLATION	protein_coding	-	CCDS24535.1	1	440	5	5.9	7.5	239	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000018914	Il3	ENSMUST00000019058	ENSMUSP00000019058	TRANSLATION	protein_coding	-	CCDS24693.1	1	166	0	4	0.5	129.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000000282	Mnt	ENSMUST00000132150	ENSMUSP00000118435	TRANSLATION	protein_coding	start/stop	-	5	207	0	1.04	0	34.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000282	Mnt	ENSMUST00000000291	ENSMUSP00000000291	TRANSLATION	protein_coding	-	CCDS25037.1	1	591	0	1.54	1.7	48	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000282	Mnt	ENSMUST00000133217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046731	Kctd11	ENSMUST00000238978	ENSMUSP00000159163	TRANSLATION	protein_coding	-	CCDS24918.1	-	232	0	0.2	6.3	37.9	0	-4,-5	-	-	6.23	MINOR
ENSMUSG00000046731	Kctd11	ENSMUST00000050555	ENSMUSP00000059107	TRANSLATION	protein_coding	-	-	-	271	0	1.2	0	70.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000075510	Fam187a	ENSMUST00000100369	ENSMUSP00000097938	TRANSLATION	protein_coding	-	CCDS48949.1	-	417	0	0	1.5	29.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000013415	Igf2bp1	ENSMUST00000152896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013415	Igf2bp1	ENSMUST00000013559	ENSMUSP00000013559	TRANSLATION	protein_coding	-	CCDS25286.1	1	577	0	9.25	12.8	252.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000013415	Igf2bp1	ENSMUST00000146586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013415	Igf2bp1	ENSMUST00000141515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013415	Igf2bp1	ENSMUST00000138513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032740	Ccdc88a	ENSMUST00000144450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032740	Ccdc88a	ENSMUST00000155854	ENSMUSP00000115117	TRANSLATION	protein_coding	start/stop	-	5	405	0	0.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032740	Ccdc88a	ENSMUST00000040182	ENSMUSP00000048978	TRANSLATION	protein_coding	-	CCDS24494.1	5	1845	0	2.49	5.1	114.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000032740	Ccdc88a	ENSMUST00000239407	ENSMUSP00000159356	TRANSLATION	protein_coding	-	-	-	2016	0	2.49	1.5	114.7	0	-4,-7	-	-	12.244	MINOR
ENSMUSG00000032740	Ccdc88a	ENSMUST00000123561	ENSMUSP00000119173	TRANSLATION	protein_coding	start/stop	-	5	737	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032740	Ccdc88a	ENSMUST00000137227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032740	Ccdc88a	ENSMUST00000109477	ENSMUSP00000105103	TRANSLATION	protein_coding	-	-	2	117	0	1.23	0	0	0	-4,-7	-	-	2.964	MINOR
ENSMUSG00000032740	Ccdc88a	ENSMUST00000140194	ENSMUSP00000114942	TRANSLATION	protein_coding	start/stop	-	5	354	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058546	Rpl23a	ENSMUST00000127270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058546	Rpl23a	ENSMUST00000102483	ENSMUSP00000099541	TRANSLATION	protein_coding	-	CCDS25093.1	1	156	0	2.55	20.2	97.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000058546	Rpl23a	ENSMUST00000144561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039230	Tbcd	ENSMUST00000147560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039230	Tbcd	ENSMUST00000155666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039230	Tbcd	ENSMUST00000103013	ENSMUSP00000099302	TRANSLATION	protein_coding	-	CCDS25778.1	1	1196	0	0	2.7	236.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039230	Tbcd	ENSMUST00000151666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039230	Tbcd	ENSMUST00000106093	ENSMUSP00000101699	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039230	Tbcd	ENSMUST00000147470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039230	Tbcd	ENSMUST00000125167	ENSMUSP00000124735	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039230	Tbcd	ENSMUST00000139414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070378	Olfr403	ENSMUST00000206114	ENSMUSP00000145741	TRANSLATION	protein_coding	-	CCDS25027.1	3	313	0	0.42	6.5	197.9	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000070378	Olfr403	ENSMUST00000206247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070378	Olfr403	ENSMUST00000076675	ENSMUSP00000075971	TRANSLATION	protein_coding	-	CCDS25027.1	-	313	0	0.42	6.5	197.9	4	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000055333	Fat2	ENSMUST00000108864	ENSMUSP00000104492	TRANSLATION	protein_coding	-	CCDS36157.1	5	4351	207	8.96	0.5	1566.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000055333	Fat2	ENSMUST00000068853	ENSMUSP00000067556	TRANSLATION	protein_coding	-	CCDS36157.1	5	4351	207	8.96	0.5	1566.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056328	Myh1	ENSMUST00000018637	ENSMUSP00000018637	TRANSLATION	protein_coding	-	CCDS24855.1	5	1942	15	37.13	12.8	1549.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000056328	Myh1	ENSMUST00000129018	ENSMUSP00000115583	TRANSLATION	protein_coding	stop	-	1	95	0	1.75	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056328	Myh1	ENSMUST00000075734	ENSMUSP00000075147	TRANSLATION	protein_coding	-	CCDS24855.1	1	1942	15	37.13	12.8	1549.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000056328	Myh1	ENSMUST00000124516	ENSMUSP00000117569	TRANSLATION	protein_coding	-	CCDS24855.1	1	1942	15	37.13	12.8	1549.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000072983	4933414I15Rik	ENSMUST00000109123	ENSMUSP00000104751	TRANSLATION	protein_coding	-	-	1	133	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000072983	4933414I15Rik	ENSMUST00000156329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057522	Spop	ENSMUST00000150884	ENSMUSP00000119650	TRANSLATION	protein_coding	stop	-	3	94	0	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057522	Spop	ENSMUST00000107722	ENSMUSP00000103350	TRANSLATION	protein_coding	-	CCDS36286.1	1	374	0	8.08	17.5	142.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000057522	Spop	ENSMUST00000127713	ENSMUSP00000118922	TRANSLATION	protein_coding	stop	-	3	76	0	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057522	Spop	ENSMUST00000150922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057522	Spop	ENSMUST00000107724	ENSMUSP00000103352	TRANSLATION	protein_coding	-	CCDS36286.1	1	374	0	8.08	17.5	142.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000017288	Vps53	ENSMUST00000170730	ENSMUSP00000127364	TRANSLATION	protein_coding	stop	-	5	123	0	0	0	106.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000166436	ENSMUSP00000131387	TRANSLATION	protein_coding	start/stop	-	5	204	0	0	0	294.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000094015	ENSMUSP00000091554	TRANSLATION	protein_coding	-	-	5	803	0	0	0	440.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000166084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017288	Vps53	ENSMUST00000141773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017288	Vps53	ENSMUST00000129256	ENSMUSP00000126125	TRANSLATION	protein_coding	-	-	1	36	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000163878	ENSMUSP00000128856	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000108419	ENSMUSP00000104057	TRANSLATION	protein_coding	-	-	1	655	0	0	0	325.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000169734	ENSMUSP00000130499	TRANSLATION	nonsense_mediated_decay	-	-	5	334	0	0	0	456.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000143459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017288	Vps53	ENSMUST00000143163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017288	Vps53	ENSMUST00000167114	ENSMUSP00000131663	TRANSLATION	protein_coding	stop	-	5	419	0	0	0	115.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017288	Vps53	ENSMUST00000170143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017288	Vps53	ENSMUST00000140886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017288	Vps53	ENSMUST00000056601	ENSMUSP00000061317	TRANSLATION	protein_coding	-	CCDS25060.1	1	832	0	0	1.5	575.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017288	Vps53	ENSMUST00000166752	ENSMUSP00000129159	TRANSLATION	nonsense_mediated_decay	-	-	5	547	0	0	0	482.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020739	Nup85	ENSMUST00000143351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000140986	ENSMUSP00000117333	TRANSLATION	protein_coding	start/stop	-	5	280	0	7.25	0	288.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020739	Nup85	ENSMUST00000138998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000144473	ENSMUSP00000116069	TRANSLATION	protein_coding	start/stop	-	5	274	0	7	0	267.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020739	Nup85	ENSMUST00000127126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000135893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000128745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000134209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020739	Nup85	ENSMUST00000021085	ENSMUSP00000021085	TRANSLATION	protein_coding	-	CCDS25640.1	1	656	0	17.08	7.5	594.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078132	Gm11939	ENSMUST00000104931	ENSMUSP00000100536	TRANSLATION	protein_coding	-	-	-	99	0	0	0	139.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000078276	Gm14190	ENSMUST00000105073	ENSMUSP00000100694	TRANSLATION	protein_coding	-	-	-	50	0	0	0	0	0	-2,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000048329	Mfsd6l	ENSMUST00000053211	ENSMUSP00000061601	TRANSLATION	protein_coding	-	CCDS24867.1	-	586	0	0	0.5	130.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000040373	Cacng5	ENSMUST00000106742	ENSMUSP00000102353	TRANSLATION	protein_coding	-	CCDS25572.1	1	275	0	1.96	10	81.6	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040373	Cacng5	ENSMUST00000039071	ENSMUSP00000047888	TRANSLATION	protein_coding	-	CCDS25572.1	1	275	0	1.96	10	81.6	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000538	Tom1l2	ENSMUST00000064019	ENSMUSP00000063414	TRANSLATION	protein_coding	-	-	1	450	0	6.32	0.5	251.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000000538	Tom1l2	ENSMUST00000093048	ENSMUSP00000090736	TRANSLATION	protein_coding	-	-	5	462	0	5.32	2.4	221.7	0	-4,-5	-	-	8.766	MINOR
ENSMUSG00000000538	Tom1l2	ENSMUST00000102682	ENSMUSP00000099743	TRANSLATION	protein_coding	-	CCDS24787.1	1	440	0	6.32	0.5	251.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000000538	Tom1l2	ENSMUST00000151284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000538	Tom1l2	ENSMUST00000095254	ENSMUSP00000092884	TRANSLATION	protein_coding	-	CCDS36171.1	1	487	0	6.32	6.3	251.1	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000000538	Tom1l2	ENSMUST00000093046	ENSMUSP00000090734	TRANSLATION	protein_coding	-	-	5	457	0	5.32	1.2	155.8	0	-4,-5	-	-	4.36	MINOR
ENSMUSG00000000538	Tom1l2	ENSMUST00000142225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000538	Tom1l2	ENSMUST00000153920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000538	Tom1l2	ENSMUST00000102683	ENSMUSP00000099744	TRANSLATION	protein_coding	-	CCDS24786.1	1	507	0	6.32	6.3	251.1	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000000538	Tom1l2	ENSMUST00000143124	ENSMUSP00000121936	TRANSLATION	protein_coding	start	-	3	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000538	Tom1l2	ENSMUST00000133420	ENSMUSP00000117623	TRANSLATION	protein_coding	start	-	3	199	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045471	Hcrt	ENSMUST00000107360	ENSMUSP00000102983	TRANSLATION	protein_coding	-	-	5	106	0	1	0	177	0	3,-2	-	-	7.878	MINOR
ENSMUSG00000045471	Hcrt	ENSMUST00000055083	ENSMUSP00000057578	TRANSLATION	protein_coding	-	CCDS25436.1	1	130	0	1	3.9	245.7	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000006931	P3h4	ENSMUST00000141840	ENSMUSP00000135217	TRANSLATION	protein_coding	start/stop	-	3	103	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006931	P3h4	ENSMUST00000066489	ENSMUSP00000065278	TRANSLATION	protein_coding	-	CCDS25421.1	1	443	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000001583	Tnk1	ENSMUST00000108626	ENSMUSP00000104266	TRANSLATION	protein_coding	-	-	1	434	18	5.44	0	244.2	0	-4,-7	-	-	13.698	MINOR
ENSMUSG00000001583	Tnk1	ENSMUST00000001626	ENSMUSP00000001626	TRANSLATION	protein_coding	-	CCDS24917.1	1	666	18	7.59	2.7	244.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000001583	Tnk1	ENSMUST00000125571	ENSMUSP00000118490	TRANSLATION	protein_coding	stop	-	3	268	18	2.69	0	129.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001583	Tnk1	ENSMUST00000156507	ENSMUSP00000120585	TRANSLATION	protein_coding	start/stop	-	3	186	0	2.68	0	58.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001583	Tnk1	ENSMUST00000108628	ENSMUSP00000104268	TRANSLATION	protein_coding	-	-	5	671	18	7.59	0	244.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000020794	Ube2g1	ENSMUST00000138247	ENSMUSP00000117588	TRANSLATION	protein_coding	-	-	1	99	0	2.25	0	88.4	0	-4,-5	-	-	2.46	MINOR
ENSMUSG00000020794	Ube2g1	ENSMUST00000126046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020794	Ube2g1	ENSMUST00000021148	ENSMUSP00000021148	TRANSLATION	protein_coding	-	CCDS36217.1	1	170	0	4.5	18.3	172.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017718	Afmid	ENSMUST00000153850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017718	Afmid	ENSMUST00000148016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017718	Afmid	ENSMUST00000131268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017718	Afmid	ENSMUST00000073388	ENSMUSP00000073102	TRANSLATION	protein_coding	-	CCDS25693.1	1	305	6	5.393	1.5	45.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000017718	Afmid	ENSMUST00000139945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017718	Afmid	ENSMUST00000149668	ENSMUSP00000119310	TRANSLATION	protein_coding	start	-	1	363	6	5.195	0	44.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048497	Mmgt2	ENSMUST00000148707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048497	Mmgt2	ENSMUST00000155759	ENSMUSP00000128697	TRANSLATION	protein_coding	-	CCDS36179.1	1	123	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000048497	Mmgt2	ENSMUST00000129162	ENSMUSP00000128669	TRANSLATION	protein_coding	-	CCDS36179.1	5	123	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000048497	Mmgt2	ENSMUST00000062860	ENSMUSP00000129511	TRANSLATION	protein_coding	stop	-	2	10	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000048497	Mmgt2	ENSMUST00000127589	ENSMUSP00000130397	TRANSLATION	protein_coding	stop	-	2	34	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000048497	Mmgt2	ENSMUST00000148696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048497	Mmgt2	ENSMUST00000142112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014198	Zfp385c	ENSMUST00000103119	ENSMUSP00000099408	TRANSLATION	protein_coding	-	CCDS25430.1	1	429	11	0	0.5	80.7	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000014198	Zfp385c	ENSMUST00000151589	ENSMUSP00000119259	TRANSLATION	protein_coding	start/stop	-	5	251	8	0	0	50.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014198	Zfp385c	ENSMUST00000153494	ENSMUSP00000115268	TRANSLATION	protein_coding	stop	-	3	115	4	0	0	23.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014198	Zfp385c	ENSMUST00000148560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020612	Prkar1a	ENSMUST00000106677	ENSMUSP00000102288	TRANSLATION	protein_coding	-	CCDS25583.1	5	381	25	8.75	12.2	199.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020612	Prkar1a	ENSMUST00000106676	ENSMUSP00000102287	TRANSLATION	protein_coding	-	-	2	171	1	3.75	0	58.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020612	Prkar1a	ENSMUST00000155532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020612	Prkar1a	ENSMUST00000123354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020612	Prkar1a	ENSMUST00000049527	ENSMUSP00000056500	TRANSLATION	protein_coding	-	CCDS25583.1	1	381	25	8.75	12.2	199.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000045421	Olfr1390	ENSMUST00000215014	ENSMUSP00000151059	TRANSLATION	protein_coding	-	CCDS24607.1	5	311	0	0.24	4	153.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000045421	Olfr1390	ENSMUST00000062719	ENSMUSP00000053611	TRANSLATION	protein_coding	-	CCDS24607.1	-	311	0	0.24	4	153.5	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000042650	Alkbh5	ENSMUST00000044250	ENSMUSP00000049116	TRANSLATION	protein_coding	-	CCDS24794.1	1	395	15	2.25	6.3	0	0	-2,0	-	-	14	PRINCIPAL:1
ENSMUSG00000042650	Alkbh5	ENSMUST00000134770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047861	Foxi1	ENSMUST00000060271	ENSMUSP00000058651	TRANSLATION	protein_coding	-	CCDS24539.1	1	372	0	0.8	1.5	131.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000006574	Slc4a1	ENSMUST00000006749	ENSMUSP00000006749	TRANSLATION	protein_coding	-	CCDS25496.1	1	929	0	16.325	1.5	916.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000006574	Slc4a1	ENSMUST00000151050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006574	Slc4a1	ENSMUST00000149993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006574	Slc4a1	ENSMUST00000128405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006574	Slc4a1	ENSMUST00000145636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020120	Plek	ENSMUST00000020321	ENSMUSP00000020321	TRANSLATION	protein_coding	-	-	1	327	10	7.5	0	167.9	0	-4,-5	-	-	14.904	MINOR
ENSMUSG00000020120	Plek	ENSMUST00000156101	ENSMUSP00000122225	TRANSLATION	protein_coding	stop	-	3	46	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020120	Plek	ENSMUST00000102881	ENSMUSP00000099945	TRANSLATION	protein_coding	-	CCDS24446.1	1	350	10	8.33	10.4	191.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000063251	Krtap4-1	ENSMUST00000081007	ENSMUSP00000079799	TRANSLATION	protein_coding	-	CCDS36316.1	-	169	0	0	0.5	50	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041346	Wrap53	ENSMUST00000155894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041346	Wrap53	ENSMUST00000132548	ENSMUSP00000121040	TRANSLATION	protein_coding	stop	-	5	170	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041346	Wrap53	ENSMUST00000048139	ENSMUSP00000047825	TRANSLATION	protein_coding	-	CCDS24897.1	1	532	0	4.56	1.5	39.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090266	Mettl23	ENSMUST00000132593	ENSMUSP00000135469	TRANSLATION	nonsense_mediated_decay	start	-	3	46	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090266	Mettl23	ENSMUST00000128784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090266	Mettl23	ENSMUST00000140869	ENSMUSP00000135321	TRANSLATION	nonsense_mediated_decay	start	-	5	76	0	0.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090266	Mettl23	ENSMUST00000176799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090266	Mettl23	ENSMUST00000175930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090266	Mettl23	ENSMUST00000143184	ENSMUSP00000119131	TRANSLATION	protein_coding	start	-	2	110	16	0.48	0	30.5	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000090266	Mettl23	ENSMUST00000176765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090266	Mettl23	ENSMUST00000106370	ENSMUSP00000101978	TRANSLATION	protein_coding	-	CCDS25679.2	1	253	19	2	0.5	64	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000005237	Dnah2	ENSMUST00000108659	ENSMUSP00000104299	TRANSLATION	protein_coding	-	CCDS36192.1	5	4462	61	41.212	0.5	3009	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000005237	Dnah2	ENSMUST00000208777	ENSMUSP00000146424	TRANSLATION	protein_coding	start/stop	-	5	232	0	0	0	196	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005237	Dnah2	ENSMUST00000149991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005237	Dnah2	ENSMUST00000151811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005237	Dnah2	ENSMUST00000035539	ENSMUSP00000047329	TRANSLATION	protein_coding	-	-	5	4456	61	41.08	0	3009	0	-4,-7	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000005237	Dnah2	ENSMUST00000154985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025578	Cbx8	ENSMUST00000143831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025578	Cbx8	ENSMUST00000026663	ENSMUSP00000026663	TRANSLATION	protein_coding	-	CCDS25709.1	1	362	0	2.3	1.5	108.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025578	Cbx8	ENSMUST00000128019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049470	Aff4	ENSMUST00000139054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049470	Aff4	ENSMUST00000130152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049470	Aff4	ENSMUST00000060945	ENSMUSP00000051479	TRANSLATION	protein_coding	-	CCDS24676.1	1	1160	0	3.76	1.5	1366.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049470	Aff4	ENSMUST00000154499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049470	Aff4	ENSMUST00000136470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049470	Aff4	ENSMUST00000129019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049470	Aff4	ENSMUST00000152616	ENSMUSP00000118866	TRANSLATION	protein_coding	start/stop	-	5	159	0	1.21	0	95.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049470	Aff4	ENSMUST00000153821	ENSMUSP00000120613	TRANSLATION	protein_coding	stop	-	5	122	0	1.8	0	162.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078130	Gm11555	ENSMUST00000073126	ENSMUSP00000131822	TRANSLATION	protein_coding	stop	-	5	164	0	0	0.5	77.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078130	Gm11555	ENSMUST00000104929	ENSMUSP00000100533	TRANSLATION	protein_coding	-	-	-	175	0	0	0	82	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017677	Wsb1	ENSMUST00000145772	ENSMUSP00000137999	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000017677	Wsb1	ENSMUST00000017821	ENSMUSP00000017821	TRANSLATION	protein_coding	-	CCDS25118.1	1	421	0	6.544	11.5	150.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000017677	Wsb1	ENSMUST00000131818	ENSMUSP00000131290	TRANSLATION	nonsense_mediated_decay	start	-	5	175	0	3.462	0	43.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017677	Wsb1	ENSMUST00000150416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017677	Wsb1	ENSMUST00000137890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017677	Wsb1	ENSMUST00000153585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017677	Wsb1	ENSMUST00000131848	ENSMUSP00000128181	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020283	Pex13	ENSMUST00000124839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020283	Pex13	ENSMUST00000020523	ENSMUSP00000020523	TRANSLATION	protein_coding	-	CCDS24478.1	1	405	0	2.13	6.3	197.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000020283	Pex13	ENSMUST00000130811	ENSMUSP00000115020	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020283	Pex13	ENSMUST00000146533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078261	Gm11596	ENSMUST00000105058	ENSMUSP00000100679	TRANSLATION	protein_coding	-	CCDS48918.1	-	205	0	0	1.5	77.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020429	Igfbp1	ENSMUST00000020704	ENSMUSP00000020704	TRANSLATION	protein_coding	-	CCDS24427.1	1	272	4	2.8	1.5	115.3	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000034931	Dhx8	ENSMUST00000156842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034931	Dhx8	ENSMUST00000039152	ENSMUSP00000037251	TRANSLATION	protein_coding	-	CCDS25479.1	1	1244	9	22.25	0.5	280.7	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034931	Dhx8	ENSMUST00000129741	ENSMUSP00000119430	TRANSLATION	protein_coding	stop	-	5	1174	9	20.25	0	280.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000034931	Dhx8	ENSMUST00000125409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034931	Dhx8	ENSMUST00000141461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020889	Nr1d1	ENSMUST00000064941	ENSMUSP00000069505	TRANSLATION	protein_coding	-	CCDS25363.1	1	615	8	4.75	7.5	203.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020889	Nr1d1	ENSMUST00000139220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051427	Ccdc157	ENSMUST00000137060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051427	Ccdc157	ENSMUST00000093381	ENSMUSP00000091074	TRANSLATION	protein_coding	-	CCDS48743.1	1	718	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000051427	Ccdc157	ENSMUST00000132712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051427	Ccdc157	ENSMUST00000101626	ENSMUSP00000099148	TRANSLATION	protein_coding	-	CCDS24379.1	1	616	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000051427	Ccdc157	ENSMUST00000133962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051427	Ccdc157	ENSMUST00000139099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045942	BC049762	ENSMUST00000231433	ENSMUSP00000155926	TRANSLATION	protein_coding	-	-	-	219	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000045942	BC049762	ENSMUST00000054226	ENSMUSP00000061848	TRANSLATION	protein_coding	-	CCDS24650.1	1	163	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000045942	BC049762	ENSMUST00000065950	ENSMUSP00000071085	TRANSLATION	protein_coding	-	CCDS24650.1	1	163	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000020409	Slu7	ENSMUST00000126128	ENSMUSP00000122142	TRANSLATION	protein_coding	stop	-	5	108	0	0.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020409	Slu7	ENSMUST00000151880	ENSMUSP00000116609	TRANSLATION	protein_coding	stop	-	1	497	4	1.76	0	365.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020409	Slu7	ENSMUST00000178622	ENSMUSP00000137281	TRANSLATION	protein_coding	-	CCDS24557.1	2	585	4	1.76	1.5	365.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020409	Slu7	ENSMUST00000136541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020409	Slu7	ENSMUST00000149402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020409	Slu7	ENSMUST00000020681	ENSMUSP00000020681	TRANSLATION	protein_coding	-	CCDS24557.1	1	585	4	1.76	1.5	365.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000073063	Hbq1b	ENSMUST00000101387	ENSMUSP00000098936	TRANSLATION	protein_coding	-	CCDS24524.1	1	142	21	3	4.1	83.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000073063	Hbq1b	ENSMUST00000151724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020940	Efcab15	ENSMUST00000107026	ENSMUSP00000102641	TRANSLATION	protein_coding	-	-	1	313	4	1.72	0	41	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000020940	Efcab15	ENSMUST00000021323	ENSMUSP00000021323	TRANSLATION	protein_coding	-	CCDS56814.1	5	382	4	1.72	1.5	41	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000020940	Efcab15	ENSMUST00000172850	ENSMUSP00000139837	TRANSLATION	nonsense_mediated_decay	-	-	5	191	4	1.72	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020940	Efcab15	ENSMUST00000174567	ENSMUSP00000134292	TRANSLATION	protein_coding	stop	-	5	196	3	1.32	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020940	Efcab15	ENSMUST00000140559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020937	Plcd3	ENSMUST00000142970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020937	Plcd3	ENSMUST00000124740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020937	Plcd3	ENSMUST00000143012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020937	Plcd3	ENSMUST00000103077	ENSMUSP00000099366	TRANSLATION	protein_coding	-	CCDS25512.1	1	785	14	13.63	2.7	487.9	0	-3,0	-	-	18	PRINCIPAL:1
ENSMUSG00000020937	Plcd3	ENSMUST00000128650	ENSMUSP00000117455	TRANSLATION	protein_coding	start	-	1	471	14	8.53	0.5	400.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000069722	Krtap3-3	ENSMUST00000092700	ENSMUSP00000090374	TRANSLATION	protein_coding	-	CCDS25385.1	-	99	0	0	7.5	158.9	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020911	Krt19	ENSMUST00000007317	ENSMUSP00000007317	TRANSLATION	protein_coding	-	CCDS25411.1	1	403	0	4.36	3.9	395.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020911	Krt19	ENSMUST00000126460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020911	Krt19	ENSMUST00000125888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040711	Sh3pxd2b	ENSMUST00000138771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040711	Sh3pxd2b	ENSMUST00000239041	ENSMUSP00000158896	TRANSLATION	protein_coding	-	-	-	936	0	8.076	1.5	214.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000040711	Sh3pxd2b	ENSMUST00000038753	ENSMUSP00000044276	TRANSLATION	protein_coding	-	CCDS24526.1	1	908	0	8.076	1.5	214.4	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000058756	Thra	ENSMUST00000124072	ENSMUSP00000115323	TRANSLATION	protein_coding	stop	-	1	413	26	6.8	0	168.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058756	Thra	ENSMUST00000153043	ENSMUSP00000123056	TRANSLATION	protein_coding	stop	-	3	64	2	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058756	Thra	ENSMUST00000152195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058756	Thra	ENSMUST00000142944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058756	Thra	ENSMUST00000064187	ENSMUSP00000068281	TRANSLATION	protein_coding	-	CCDS83893.1	1	492	27	6.58	1.5	164.5	0	-4,-5	-	-	16.293	MINOR
ENSMUSG00000058756	Thra	ENSMUST00000153468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058756	Thra	ENSMUST00000124130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058756	Thra	ENSMUST00000103139	ENSMUSP00000099428	TRANSLATION	protein_coding	-	CCDS25362.1	1	410	27	7.38	10.8	168.5	0	-4,-5	-	-	20.982	PRINCIPAL:1
ENSMUSG00000058756	Thra	ENSMUST00000150693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040554	Aipl1	ENSMUST00000048207	ENSMUSP00000036279	TRANSLATION	protein_coding	-	CCDS24976.1	1	328	0	5.8	2.7	28.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040554	Aipl1	ENSMUST00000059082	ENSMUSP00000061957	TRANSLATION	nonsense_mediated_decay	-	-	2	179	0	2.8	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047197	Gjd3	ENSMUST00000062931	ENSMUSP00000055246	TRANSLATION	protein_coding	stop	CCDS25369.1	-	278	0	0.64	1.5	261.3	0	-1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000037335	Hand1	ENSMUST00000160392	ENSMUSP00000124951	TRANSLATION	protein_coding	-	CCDS24721.1	1	216	0	0.4	7.5	60.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037335	Hand1	ENSMUST00000108845	ENSMUSP00000104473	TRANSLATION	protein_coding	stop	-	5	31	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037335	Hand1	ENSMUST00000036917	ENSMUSP00000046999	TRANSLATION	protein_coding	-	CCDS24721.1	1	216	0	0.4	7.5	60.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000034543	Morc2a	ENSMUST00000128666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034543	Morc2a	ENSMUST00000131517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034543	Morc2a	ENSMUST00000096441	ENSMUSP00000094176	TRANSLATION	protein_coding	-	CCDS48741.1	5	1030	11	5.15	1.5	150	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034543	Morc2a	ENSMUST00000140242	ENSMUSP00000120211	TRANSLATION	protein_coding	stop	-	3	102	6	2.09	0	60.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034543	Morc2a	ENSMUST00000126035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034543	Morc2a	ENSMUST00000093389	ENSMUSP00000091087	TRANSLATION	protein_coding	-	CCDS48741.1	1	1030	11	5.15	1.5	150	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000101605	Ace3	ENSMUST00000190995	ENSMUSP00000140827	TRANSLATION	protein_coding,RT	-	CCDS59570.1	1	737	8	11.8	1.5	807.5	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000078653	Cntd1	ENSMUST00000128735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078653	Cntd1	ENSMUST00000103107	ENSMUSP00000099396	TRANSLATION	protein_coding	-	CCDS25461.1	1	334	0	0	0.5	22.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078653	Cntd1	ENSMUST00000153438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020361	Hspa4	ENSMUST00000139322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020361	Hspa4	ENSMUST00000020630	ENSMUSP00000020630	TRANSLATION	protein_coding	-	CCDS24674.1	1	842	21	13.16	7.5	722.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000020361	Hspa4	ENSMUST00000151854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000686	Abhd15	ENSMUST00000145676	ENSMUSP00000117776	TRANSLATION	protein_coding	start	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000686	Abhd15	ENSMUST00000147386	ENSMUSP00000116682	TRANSLATION	protein_coding	start	-	1	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000686	Abhd15	ENSMUST00000094004	ENSMUSP00000091541	TRANSLATION	protein_coding	-	CCDS36234.1	1	459	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000070335	Krtap9-1	ENSMUST00000093936	ENSMUSP00000091468	TRANSLATION	protein_coding	-	CCDS25399.1	-	186	0	0	1.5	32.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000001056	Nhp2	ENSMUST00000127405	ENSMUSP00000120014	TRANSLATION	protein_coding	-	CCDS24655.1	1	153	0	2.75	8.8	82.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001056	Nhp2	ENSMUST00000001083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020773	Trim47	ENSMUST00000149957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020773	Trim47	ENSMUST00000134691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020773	Trim47	ENSMUST00000106441	ENSMUSP00000102049	TRANSLATION	protein_coding	-	CCDS56822.1	1	641	8	2.155	1.5	108.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000020773	Trim47	ENSMUST00000127235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020773	Trim47	ENSMUST00000021120	ENSMUSP00000021120	TRANSLATION	protein_coding	-	CCDS56823.1	1	642	8	2.08	1.5	108.3	0	-4,-5	-	-	17.79	PRINCIPAL:4
ENSMUSG00000020773	Trim47	ENSMUST00000141531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020773	Trim47	ENSMUST00000133039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037331	Larp1	ENSMUST00000178636	ENSMUSP00000136673	TRANSLATION	protein_coding	-	CCDS56771.1	5	1072	0	5.68	0.5	73	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000037331	Larp1	ENSMUST00000071487	ENSMUSP00000071421	TRANSLATION	protein_coding	-	-	5	1072	0	5.68	0.5	73	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000037331	Larp1	ENSMUST00000140500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025162	Csnk1d	ENSMUST00000131375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025162	Csnk1d	ENSMUST00000154483	ENSMUSP00000117472	TRANSLATION	protein_coding	start/stop	-	3	218	12	3.75	0	71.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025162	Csnk1d	ENSMUST00000070575	ENSMUSP00000070721	TRANSLATION	protein_coding	-	CCDS25763.1	1	409	20	7.38	18.3	96.3	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000025162	Csnk1d	ENSMUST00000155070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025162	Csnk1d	ENSMUST00000239115	ENSMUSP00000158953	TRANSLATION	protein_coding	-	-	-	428	20	7.38	5.4	96.3	0	-4,-7	-	-	19.016	MINOR
ENSMUSG00000025162	Csnk1d	ENSMUST00000139267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025162	Csnk1d	ENSMUST00000141071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025162	Csnk1d	ENSMUST00000018274	ENSMUSP00000018274	TRANSLATION	protein_coding	-	CCDS25762.1	1	415	20	7.38	13.8	96.3	0	-4,-7	-	-	20.96	PRINCIPAL:4
ENSMUSG00000025162	Csnk1d	ENSMUST00000146837	ENSMUSP00000115055	TRANSLATION	nonsense_mediated_decay	start	-	3	68	10	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020877	Scrn2	ENSMUST00000133054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020877	Scrn2	ENSMUST00000021249	ENSMUSP00000021249	TRANSLATION	protein_coding	-	CCDS25310.1	1	425	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000020877	Scrn2	ENSMUST00000153482	ENSMUSP00000116606	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020877	Scrn2	ENSMUST00000126874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040430	Pitpnc1	ENSMUST00000040380	ENSMUSP00000046337	TRANSLATION	protein_coding	-	-	1	309	0	3.87	4.1	319.8	0	-4,-5	-	-	7.128	MINOR
ENSMUSG00000040430	Pitpnc1	ENSMUST00000134763	ENSMUSP00000122609	TRANSLATION	protein_coding	stop	-	5	195	0	3.54	0	271.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040430	Pitpnc1	ENSMUST00000146680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040430	Pitpnc1	ENSMUST00000103064	ENSMUSP00000099353	TRANSLATION	protein_coding	-	CCDS25567.1	1	268	0	5.1	11.6	374.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020916	Krt36	ENSMUST00000107416	ENSMUSP00000103039	TRANSLATION	protein_coding	-	CCDS48929.1	5	473	0	3.76	1.5	366.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020471	Pold2	ENSMUST00000102922	ENSMUSP00000099986	TRANSLATION	protein_coding	-	CCDS24407.1	1	469	0	10.25	3.9	168.1	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000020471	Pold2	ENSMUST00000134957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020471	Pold2	ENSMUST00000136714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020471	Pold2	ENSMUST00000141907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020471	Pold2	ENSMUST00000153995	ENSMUSP00000122906	TRANSLATION	protein_coding	stop	-	3	241	0	5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078652	Psme3	ENSMUST00000131170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078652	Psme3	ENSMUST00000019470	ENSMUSP00000019470	TRANSLATION	protein_coding	-	CCDS25463.1	1	254	0	5.324	17	306.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000078652	Psme3	ENSMUST00000127998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078652	Psme3	ENSMUST00000151385	ENSMUSP00000116996	TRANSLATION	protein_coding	stop	-	5	203	0	3.194	0	206	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078652	Psme3	ENSMUST00000142640	ENSMUSP00000118279	TRANSLATION	protein_coding	stop	-	3	154	0	1.58	0	87.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078695	Cisd3	ENSMUST00000145623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078695	Cisd3	ENSMUST00000107584	ENSMUSP00000103210	TRANSLATION	protein_coding	-	-	1	115	19	1.8	0	73.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000078695	Cisd3	ENSMUST00000107585	ENSMUSP00000103211	TRANSLATION	protein_coding	-	-	1	134	19	1.8	0	73.2	0	-1,1	-	-	17.97	ALTERNATIVE:2
ENSMUSG00000078695	Cisd3	ENSMUST00000107583	ENSMUSP00000103209	TRANSLATION	protein_coding	-	CCDS48896.1	1	137	19	1.8	1.5	73.2	0	-4,-2	-	-	17.97	PRINCIPAL:2
ENSMUSG00000020515	Cnot8	ENSMUST00000133923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020515	Cnot8	ENSMUST00000020822	ENSMUSP00000020822	TRANSLATION	protein_coding	-	CCDS24722.1	1	292	4	6.75	17	81	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020515	Cnot8	ENSMUST00000108843	ENSMUSP00000104471	TRANSLATION	protein_coding	-	CCDS24722.1	1	292	4	6.75	17	81	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020515	Cnot8	ENSMUST00000134896	ENSMUSP00000116116	TRANSLATION	protein_coding	stop	-	2	75	2	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020290	Xpo1	ENSMUST00000150750	ENSMUSP00000117846	TRANSLATION	protein_coding	start/stop	-	5	233	0	4.75	0	65.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020290	Xpo1	ENSMUST00000136235	ENSMUSP00000123634	TRANSLATION	protein_coding	stop	-	3	59	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020290	Xpo1	ENSMUST00000102869	ENSMUSP00000099933	TRANSLATION	protein_coding	-	CCDS24475.1	1	1071	0	23.25	19.5	634.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020290	Xpo1	ENSMUST00000149371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020290	Xpo1	ENSMUST00000109551	ENSMUSP00000105178	TRANSLATION	protein_coding	-	CCDS24475.1	1	1071	0	23.25	19.5	634.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020290	Xpo1	ENSMUST00000102870	ENSMUSP00000099934	TRANSLATION	protein_coding	-	CCDS24475.1	5	1071	0	23.25	19.5	634.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020290	Xpo1	ENSMUST00000020538	ENSMUSP00000020538	TRANSLATION	protein_coding	-	CCDS24475.1	5	1071	0	23.25	19.5	634.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020513	Tubd1	ENSMUST00000167178	ENSMUSP00000130909	TRANSLATION	protein_coding	-	CCDS25202.1	1	455	23	5	7.8	198.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020513	Tubd1	ENSMUST00000020821	ENSMUSP00000020821	TRANSLATION	protein_coding	-	CCDS56794.1	1	486	23	4.5	0.5	198.3	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000020513	Tubd1	ENSMUST00000069503	ENSMUSP00000064383	TRANSLATION	protein_coding	-	CCDS25202.1	1	455	23	5	7.8	198.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020513	Tubd1	ENSMUST00000108030	ENSMUSP00000103665	TRANSLATION	protein_coding	-	CCDS56794.1	1	486	23	4.5	0.5	198.3	0	-4,-5	-	-	16.998	MINOR
ENSMUSG00000020513	Tubd1	ENSMUST00000164931	ENSMUSP00000130621	TRANSLATION	protein_coding	start	-	3	189	4	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036309	Skp1a	ENSMUST00000093121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036309	Skp1a	ENSMUST00000116595	ENSMUSP00000112294	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0.75	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036309	Skp1a	ENSMUST00000147684	ENSMUSP00000129711	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	1.23	0	48.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036309	Skp1a	ENSMUST00000037324	ENSMUSP00000038744	TRANSLATION	protein_coding	-	CCDS24669.1	1	163	0	4.49	21.5	207.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036309	Skp1a	ENSMUST00000166537	ENSMUSP00000131833	TRANSLATION	protein_coding	stop	-	3	96	0	2.83	0	151.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036309	Skp1a	ENSMUST00000109072	ENSMUSP00000104700	TRANSLATION	protein_coding	-	CCDS24669.1	5	163	0	4.49	21.5	207.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020702	Ccl1	ENSMUST00000108189	ENSMUSP00000103824	TRANSLATION	protein_coding	-	CCDS36249.1	1	92	0	1.85	0.5	62.2	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020702	Ccl1	ENSMUST00000021043	ENSMUSP00000021043	TRANSLATION	protein_coding	-	-	1	85	0	1.1	0	29.7	0	3,-1	-	-	6.432	MINOR
ENSMUSG00000020702	Ccl1	ENSMUST00000138333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020790	Ankfy1	ENSMUST00000150172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020790	Ankfy1	ENSMUST00000102548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020790	Ankfy1	ENSMUST00000155998	ENSMUSP00000118751	TRANSLATION	protein_coding	-	CCDS24989.1	1	1169	8	13.88	8.5	343.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020790	Ankfy1	ENSMUST00000127610	ENSMUSP00000118252	TRANSLATION	nonsense_mediated_decay	-	-	1	439	0	4.1	0	105.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020790	Ankfy1	ENSMUST00000132889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020790	Ankfy1	ENSMUST00000147195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017493	Igfbp4	ENSMUST00000123946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017493	Igfbp4	ENSMUST00000130530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017493	Igfbp4	ENSMUST00000177105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017493	Igfbp4	ENSMUST00000017637	ENSMUSP00000017637	TRANSLATION	protein_coding	-	CCDS25371.1	1	254	0	4.24	1.5	108.6	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000017493	Igfbp4	ENSMUST00000140772	ENSMUSP00000135727	TRANSLATION	protein_coding	-	-	2	161	0	2.24	0	70.8	0	-4,-7	-	-	5.73	MINOR
ENSMUSG00000017493	Igfbp4	ENSMUST00000177092	ENSMUSP00000135112	TRANSLATION	protein_coding	start	-	3	122	0	2.24	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020870	Cdc34b	ENSMUST00000021240	ENSMUSP00000021240	TRANSLATION	protein_coding	-	-	-	237	0	1	0	144.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020870	Cdc34b	ENSMUST00000188741	ENSMUSP00000139570	TRANSLATION	protein_coding	stop	-	-	233	0	1	8.8	144.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047040	Prr15l	ENSMUST00000107633	ENSMUSP00000103259	TRANSLATION	protein_coding	-	CCDS25307.1	2	100	0	0	5.1	82.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047040	Prr15l	ENSMUST00000054311	ENSMUSP00000056614	TRANSLATION	protein_coding	-	CCDS25307.1	1	100	0	0	5.1	82.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047040	Prr15l	ENSMUST00000062172	ENSMUSP00000056647	TRANSLATION	protein_coding	-	CCDS25307.1	1	100	0	0	5.1	82.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047040	Prr15l	ENSMUST00000132865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047040	Prr15l	ENSMUST00000107636	ENSMUSP00000103262	TRANSLATION	protein_coding	-	CCDS25307.1	1	100	0	0	5.1	82.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000038756	Ttll6	ENSMUST00000167258	ENSMUSP00000127778	TRANSLATION	protein_coding	-	CCDS25290.2	5	822	22	5.975	0.5	294.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038756	Ttll6	ENSMUST00000107680	ENSMUSP00000103307	TRANSLATION	protein_coding	-	-	5	718	22	5.295	0.5	294.5	0	-4,-6	-	-	16.638	MINOR
ENSMUSG00000057219	Armc7	ENSMUST00000035240	ENSMUSP00000046120	TRANSLATION	protein_coding	-	CCDS25636.1	1	198	0	1.4	6.3	26.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000057219	Armc7	ENSMUST00000140181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057219	Armc7	ENSMUST00000136985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057219	Armc7	ENSMUST00000126533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051748	Wfdc21	ENSMUST00000070832	ENSMUSP00000064479	TRANSLATION	protein_coding	-	CCDS36258.1	1	63	0	0	1.5	22.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000069718	Gm11563	ENSMUST00000092695	ENSMUSP00000090369	TRANSLATION	protein_coding	-	CCDS48913.1	-	168	0	0	0.5	50.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020532	Acaca	ENSMUST00000133811	ENSMUSP00000116174	TRANSLATION	protein_coding	stop	-	1	157	0	1.33	0	0	0	0,2	-	-	-1	MINOR
ENSMUSG00000020532	Acaca	ENSMUST00000137500	ENSMUSP00000121274	TRANSLATION	protein_coding	stop	-	3	87	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020532	Acaca	ENSMUST00000184534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020532	Acaca	ENSMUST00000136463	ENSMUSP00000116295	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020532	Acaca	ENSMUST00000183887	ENSMUSP00000139378	TRANSLATION	protein_coding	start/stop	-	3	228	0	3.01	0	196.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020532	Acaca	ENSMUST00000183548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020532	Acaca	ENSMUST00000103201	ENSMUSP00000099490	TRANSLATION	protein_coding	-	CCDS25185.1	5	2345	38	43.7188	10.8	1993.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020532	Acaca	ENSMUST00000020843	ENSMUSP00000020843	TRANSLATION	protein_coding	-	CCDS25185.1	1	2345	38	43.7188	10.8	1993.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020532	Acaca	ENSMUST00000130012	ENSMUSP00000117972	TRANSLATION	protein_coding	stop	-	5	312	4	6.58	0	111.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025384	Faap100	ENSMUST00000026448	ENSMUSP00000026448	TRANSLATION	protein_coding	-	CCDS49004.1	1	879	0	0	1.5	641.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025384	Faap100	ENSMUST00000153015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025384	Faap100	ENSMUST00000134771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025384	Faap100	ENSMUST00000154826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025384	Faap100	ENSMUST00000148520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025384	Faap100	ENSMUST00000135635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025384	Faap100	ENSMUST00000129203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025384	Faap100	ENSMUST00000152346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005204	Senp3	ENSMUST00000128355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005204	Senp3	ENSMUST00000130440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005204	Senp3	ENSMUST00000142206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005204	Senp3	ENSMUST00000135372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005204	Senp3	ENSMUST00000123084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005204	Senp3	ENSMUST00000066760	ENSMUSP00000066581	TRANSLATION	protein_coding	-	CCDS24905.1	1	568	5	4.73	1.5	157.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000005204	Senp3	ENSMUST00000134942	ENSMUSP00000114791	TRANSLATION	protein_coding	start	-	3	169	4	3.08	0	118.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005204	Senp3	ENSMUST00000153516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005204	Senp3	ENSMUST00000005336	ENSMUSP00000005336	TRANSLATION	protein_coding	-	CCDS24905.1	1	568	5	4.73	1.5	157.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000020483	Dynll2	ENSMUST00000020775	ENSMUSP00000020775	TRANSLATION	protein_coding	-	CCDS36272.1	1	89	0	2	21.5	148.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020483	Dynll2	ENSMUST00000146941	ENSMUSP00000119655	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	1	0	49	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020483	Dynll2	ENSMUST00000107923	ENSMUSP00000103556	TRANSLATION	protein_coding	-	CCDS36272.1	3	89	0	2	21.5	148.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020483	Dynll2	ENSMUST00000178105	ENSMUSP00000136241	TRANSLATION	protein_coding	-	CCDS36272.1	1	89	0	2	21.5	148.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037791	Phf12	ENSMUST00000131680	ENSMUSP00000127391	TRANSLATION	nonsense_mediated_decay	start	-	5	50	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037791	Phf12	ENSMUST00000108360	ENSMUSP00000103997	TRANSLATION	protein_coding	-	-	1	788	15	3.125	0	132.5	0	-4,-5	-	-	18	MINOR
ENSMUSG00000037791	Phf12	ENSMUST00000153747	ENSMUSP00000130741	TRANSLATION	nonsense_mediated_decay	start	-	3	73	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037791	Phf12	ENSMUST00000153428	ENSMUSP00000119390	TRANSLATION	protein_coding	start	-	1	278	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037791	Phf12	ENSMUST00000141620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037791	Phf12	ENSMUST00000123662	ENSMUSP00000131016	TRANSLATION	nonsense_mediated_decay	start	-	3	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037791	Phf12	ENSMUST00000125079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037791	Phf12	ENSMUST00000049167	ENSMUSP00000044990	TRANSLATION	protein_coding	-	CCDS48855.1	1	1003	15	3.125	6.3	132.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020182	Ddc	ENSMUST00000178704	ENSMUSP00000136467	TRANSLATION	protein_coding	-	CCDS24439.1	1	480	14	11.66	5.2	570.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020182	Ddc	ENSMUST00000134401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020182	Ddc	ENSMUST00000066237	ENSMUSP00000068525	TRANSLATION	protein_coding	-	CCDS24439.1	5	480	14	11.66	5.2	570.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020182	Ddc	ENSMUST00000155690	ENSMUSP00000121096	TRANSLATION	protein_coding	stop	-	5	253	8	5.5	0	304.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020182	Ddc	ENSMUST00000134121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020182	Ddc	ENSMUST00000145033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020182	Ddc	ENSMUST00000109659	ENSMUSP00000105286	TRANSLATION	protein_coding	-	CCDS24439.1	1	480	14	11.66	5.2	570.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020182	Ddc	ENSMUST00000122971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020182	Ddc	ENSMUST00000136810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020182	Ddc	ENSMUST00000146359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006784	Ttc25	ENSMUST00000127389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006784	Ttc25	ENSMUST00000150331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006784	Ttc25	ENSMUST00000132143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006784	Ttc25	ENSMUST00000092684	ENSMUSP00000090355	TRANSLATION	protein_coding	-	CCDS36331.1	1	624	0	3.55	0.5	12.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000006784	Ttc25	ENSMUST00000006976	ENSMUSP00000006976	TRANSLATION	protein_coding	-	-	1	506	0	3.55	0.5	12.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000040592	Cd79b	ENSMUST00000167143	ENSMUSP00000129029	TRANSLATION	protein_coding	-	CCDS48960.1	1	228	0	3.1	1.5	53.5	2	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000040592	Cd79b	ENSMUST00000044228	ENSMUSP00000048239	TRANSLATION	protein_coding	-	-	1	288	0	3.1	0	52.8	2	-4,-7	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000047759	Hs3st3a1	ENSMUST00000058652	ENSMUSP00000055930	TRANSLATION	protein_coding	-	CCDS24840.1	1	393	21	1.8	1.5	154.4	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020430	Pes1	ENSMUST00000109985	ENSMUSP00000105612	TRANSLATION	protein_coding	-	-	5	588	0	2.8	0.5	464.5	0	-4,-5	-	-	11.478	ALTERNATIVE:2
ENSMUSG00000020430	Pes1	ENSMUST00000020705	ENSMUSP00000020705	TRANSLATION	protein_coding	-	CCDS24372.1	1	584	0	2.8	0.5	473.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020430	Pes1	ENSMUST00000130973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020430	Pes1	ENSMUST00000137544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037275	Gemin5	ENSMUST00000172035	ENSMUSP00000131842	TRANSLATION	protein_coding	-	CCDS48802.1	1	1503	0	15.15	0.5	127.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037275	Gemin5	ENSMUST00000035604	ENSMUSP00000036603	TRANSLATION	protein_coding	-	CCDS24723.1	1	1502	0	15.15	0.5	127.1	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000037275	Gemin5	ENSMUST00000102711	ENSMUSP00000099772	TRANSLATION	protein_coding	-	-	5	1501	0	15.15	0.5	127.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037275	Gemin5	ENSMUST00000134953	ENSMUSP00000116600	TRANSLATION	protein_coding	start	-	2	177	0	3.5	0	15.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037275	Gemin5	ENSMUST00000134733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078924	Gm12169	ENSMUST00000109228	ENSMUSP00000104851	TRANSLATION	protein_coding	-	CCDS48777.1	5	250	0	1	1.5	56.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000010392	Gosr1	ENSMUST00000137767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010392	Gosr1	ENSMUST00000010536	ENSMUSP00000010536	TRANSLATION	protein_coding	-	CCDS25070.1	1	250	0	0	12.2	79.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020160	Meis1	ENSMUST00000144988	ENSMUSP00000134969	TRANSLATION	protein_coding	-	-	2	370	0	2.5	0	227.2	0	-4,-5	-	-	11.424	MINOR
ENSMUSG00000020160	Meis1	ENSMUST00000177417	ENSMUSP00000135726	TRANSLATION	protein_coding	-	-	5	385	0	2.764	0	227.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000020160	Meis1	ENSMUST00000125722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020160	Meis1	ENSMUST00000068264	ENSMUSP00000069277	TRANSLATION	protein_coding	-	CCDS56760.1	1	390	0	2.764	17.5	227.2	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000020160	Meis1	ENSMUST00000137300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020160	Meis1	ENSMUST00000177357	ENSMUSP00000139074	TRANSLATION	nonsense_mediated_decay	start	-	5	225	0	0	0	154.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020160	Meis1	ENSMUST00000185131	ENSMUSP00000139219	TRANSLATION	protein_coding	-	CCDS24453.1	1	465	0	2.764	14.6	227.2	0	-4,-5	-	-	15.296	PRINCIPAL:3
ENSMUSG00000020160	Meis1	ENSMUST00000118661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020160	Meis1	ENSMUST00000102878	ENSMUSP00000099942	TRANSLATION	nonsense_mediated_decay	-	-	5	349	0	2.632	0	227.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020469	Myl7	ENSMUST00000102921	ENSMUSP00000099985	TRANSLATION	protein_coding	-	CCDS24408.1	1	175	11	5	9.6	37	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000038721	Hoxb7	ENSMUST00000049352	ENSMUSP00000040121	TRANSLATION	protein_coding	-	CCDS25294.1	1	217	0	1	2.5	75.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038721	Hoxb7	ENSMUST00000151596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035112	Wnk4	ENSMUST00000170056	ENSMUSP00000132123	TRANSLATION	nonsense_mediated_decay	start	-	5	153	0	1.73	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035112	Wnk4	ENSMUST00000170372	ENSMUSP00000131954	TRANSLATION	protein_coding	start	-	3	30	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035112	Wnk4	ENSMUST00000139487	ENSMUSP00000129666	TRANSLATION	nonsense_mediated_decay	-	-	1	285	9	1.6	0	39.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035112	Wnk4	ENSMUST00000147741	ENSMUSP00000131298	TRANSLATION	nonsense_mediated_decay	-	-	5	413	18	5.4	0	161.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035112	Wnk4	ENSMUST00000103108	ENSMUSP00000099397	TRANSLATION	protein_coding	-	CCDS25459.1	1	1222	18	8.58	1.5	262.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034664	Itga2b	ENSMUST00000151625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000145925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000130757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000124767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000131247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000134735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000149519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000128752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034664	Itga2b	ENSMUST00000103086	ENSMUSP00000099375	TRANSLATION	protein_coding	-	CCDS25500.1	1	1033	26	23.95	0.5	431.3	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000034664	Itga2b	ENSMUST00000130433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078763	Slfn1	ENSMUST00000037994	ENSMUSP00000047782	TRANSLATION	protein_coding	-	CCDS25157.1	1	337	0	0	0.5	52.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018012	Rac3	ENSMUST00000134322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018012	Rac3	ENSMUST00000018156	ENSMUSP00000018156	TRANSLATION	protein_coding	-	CCDS25754.1	1	192	24	4.83	21.5	183.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000018012	Rac3	ENSMUST00000142229	ENSMUSP00000119523	TRANSLATION	protein_coding	stop	-	3	185	24	4.5	2	168.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020383	Il13	ENSMUST00000020650	ENSMUSP00000020650	TRANSLATION	protein_coding	-	CCDS24683.1	1	131	0	2.8	1.5	188.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025377	Tepsin	ENSMUST00000131569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025377	Tepsin	ENSMUST00000093901	ENSMUSP00000091428	TRANSLATION	protein_coding	-	CCDS36387.1	1	573	0	2.68	1.5	32.5	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000025377	Tepsin	ENSMUST00000026442	ENSMUSP00000026442	TRANSLATION	protein_coding	-	-	1	567	0	2.35	0	24.7	0	-4,-7	-	-	9.822	MINOR
ENSMUSG00000025377	Tepsin	ENSMUST00000152152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025377	Tepsin	ENSMUST00000106225	ENSMUSP00000101832	TRANSLATION	protein_coding	-	-	5	505	0	2.68	0	32.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025377	Tepsin	ENSMUST00000150094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000632	Sez6	ENSMUST00000138749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000632	Sez6	ENSMUST00000000646	ENSMUSP00000000646	TRANSLATION	protein_coding	-	CCDS70255.1	1	977	4	7.195	0.5	282	2	2,-3	-	-	15.598	ALTERNATIVE:2
ENSMUSG00000000632	Sez6	ENSMUST00000126866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000632	Sez6	ENSMUST00000140630	ENSMUSP00000115660	TRANSLATION	protein_coding	start/stop	-	3	278	4	3.935	0	128.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000632	Sez6	ENSMUST00000093995	ENSMUSP00000091532	TRANSLATION	protein_coding	-	CCDS25087.1	1	991	4	7.395	2.9	282	2	2,-3	-	-	16	PRINCIPAL:3
ENSMUSG00000000632	Sez6	ENSMUST00000138346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000632	Sez6	ENSMUST00000155087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000632	Sez6	ENSMUST00000142542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000632	Sez6	ENSMUST00000151982	ENSMUSP00000132041	TRANSLATION	nonsense_mediated_decay	start	-	5	452	4	2.585	0	76.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050675	Gp1ba	ENSMUST00000108551	ENSMUSP00000104191	TRANSLATION	protein_coding	-	CCDS24957.1	1	734	2	0.6	0.5	71.6	1	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000050675	Gp1ba	ENSMUST00000055184	ENSMUSP00000057563	TRANSLATION	protein_coding	-	CCDS24957.1	5	734	2	0.6	0.5	71.6	1	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000096083	Gm10428	ENSMUST00000178750	ENSMUSP00000136979	TRANSLATION	protein_coding	-	-	-	132	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000018427	Ypel2	ENSMUST00000238921	ENSMUSP00000158888	TRANSLATION	protein_coding	-	-	-	152	4	0	0	48	0	-4,-6	-	-	10	MINOR
ENSMUSG00000018427	Ypel2	ENSMUST00000018571	ENSMUSP00000018571	TRANSLATION	protein_coding	-	CCDS25205.1	1	119	4	0	19.5	48	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000018774	Cd68	ENSMUST00000018918	ENSMUSP00000018918	TRANSLATION	protein_coding	-	CCDS70216.1	1	326	0	1.375	0.5	274.5	1	1,-2	-	-	11.916	PRINCIPAL:2
ENSMUSG00000018774	Cd68	ENSMUST00000154124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018774	Cd68	ENSMUST00000108654	ENSMUSP00000104294	TRANSLATION	protein_coding	-	-	5	335	0	1.3948	0	262.3	1	1,-2	-	-	11.268	ALTERNATIVE:2
ENSMUSG00000005950	P2rx5	ENSMUST00000006104	ENSMUSP00000006104	TRANSLATION	protein_coding	-	CCDS24998.1	1	455	0	8.87	1.5	529.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000005950	P2rx5	ENSMUST00000136894	ENSMUSP00000121834	TRANSLATION	protein_coding	stop	-	5	354	0	7.52	0	452.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000005950	P2rx5	ENSMUST00000135202	ENSMUSP00000118448	TRANSLATION	protein_coding	stop	-	5	330	0	6.77	0	393.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000209031	ENSMUSP00000146491	TRANSLATION	protein_coding	start	-	3	65	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000129463	ENSMUSP00000114538	TRANSLATION	protein_coding	stop	-	2	80	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000141409	ENSMUSP00000116407	TRANSLATION	protein_coding	stop	-	2	205	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000108264	ENSMUSP00000103899	TRANSLATION	protein_coding	-	-	5	637	19	5.95	0	166	0	-4,-5	-	-	0.666	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000018478	ENSMUSP00000018478	TRANSLATION	protein_coding	-	CCDS25117.1	5	873	27	11.1	0.5	291.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018334	Ksr1	ENSMUST00000208969	ENSMUSP00000146527	TRANSLATION	protein_coding	start/stop	-	5	432	8	3.95	0	64.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018334	Ksr1	ENSMUST00000226282	ENSMUSP00000154385	TRANSLATION	protein_coding	-	-	-	818	27	9.1	0.5	161.4	0	-4,-6	-	-	7.998	MINOR
ENSMUSG00000075528	Aarsd1	ENSMUST00000070395	ENSMUSP00000067912	TRANSLATION	protein_coding	-	CCDS25467.1	1	412	4	5.66	8.8	61.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000075528	Aarsd1	ENSMUST00000140123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075528	Aarsd1	ENSMUST00000189049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075528	Aarsd1	ENSMUST00000125472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075528	Aarsd1	ENSMUST00000133240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004393	Ddx56	ENSMUST00000151446	ENSMUSP00000122368	TRANSLATION	protein_coding	stop	-	2	237	14	5.04	0	113.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004393	Ddx56	ENSMUST00000004507	ENSMUSP00000004507	TRANSLATION	protein_coding	-	CCDS24414.1	1	546	15	7.94	5.1	235.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004393	Ddx56	ENSMUST00000139073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004393	Ddx56	ENSMUST00000155874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040767	Snrnp25	ENSMUST00000121182	ENSMUSP00000112483	TRANSLATION	protein_coding	-	-	3	119	0	1.666	0	0	0	-4,-7	-	-	3.312	MINOR
ENSMUSG00000040767	Snrnp25	ENSMUST00000149043	ENSMUSP00000119306	TRANSLATION	protein_coding	stop	-	3	96	0	2.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040767	Snrnp25	ENSMUST00000155736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040767	Snrnp25	ENSMUST00000125837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040767	Snrnp25	ENSMUST00000039601	ENSMUSP00000046654	TRANSLATION	protein_coding	-	CCDS24518.1	1	123	0	3.01	2.7	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035042	Ccl5	ENSMUST00000125015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035042	Ccl5	ENSMUST00000035938	ENSMUSP00000039600	TRANSLATION	protein_coding	-	CCDS36254.1	1	91	0	1.9	11.5	75.2	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000072582	Ptrh2	ENSMUST00000108022	ENSMUSP00000103657	TRANSLATION	protein_coding	-	CCDS48876.1	1	181	0	1	7.5	160.9	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000072582	Ptrh2	ENSMUST00000108021	ENSMUSP00000103656	TRANSLATION	protein_coding	-	CCDS48876.1	5	181	0	1	7.5	160.9	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000047342	Zfp286	ENSMUST00000149230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000138105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000054654	ENSMUSP00000055517	TRANSLATION	protein_coding	-	CCDS24831.1	1	519	40	0.6	1.5	319.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047342	Zfp286	ENSMUST00000207597	ENSMUSP00000147022	TRANSLATION	protein_coding	-	-	5	201	0	0	0	60.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047342	Zfp286	ENSMUST00000152602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000140072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000145474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000149215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000207474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047342	Zfp286	ENSMUST00000108705	ENSMUSP00000104345	TRANSLATION	protein_coding	-	-	1	156	0	0	0	60.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000047342	Zfp286	ENSMUST00000139798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018160	Med1	ENSMUST00000018304	ENSMUSP00000018304	TRANSLATION	protein_coding	-	CCDS25341.1	1	1560	0	0	0.5	221.5	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000018160	Med1	ENSMUST00000092735	ENSMUSP00000090411	TRANSLATION	protein_coding	-	-	1	629	0	0	0.5	221.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018160	Med1	ENSMUST00000147933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018160	Med1	ENSMUST00000135479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018160	Med1	ENSMUST00000126483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018160	Med1	ENSMUST00000107545	ENSMUSP00000103169	TRANSLATION	protein_coding	-	CCDS36300.1	1	1575	0	0	0.5	221.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018160	Med1	ENSMUST00000129557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001588	Acap1	ENSMUST00000108622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001588	Acap1	ENSMUST00000001631	ENSMUSP00000001631	TRANSLATION	protein_coding	-	CCDS24919.1	1	740	4	18.25	6.3	442.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001588	Acap1	ENSMUST00000148037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001588	Acap1	ENSMUST00000127238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061469	Gm12569	ENSMUST00000126189	ENSMUSP00000155969	TRANSLATION	protein_coding	-	-	5	225	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000061469	Gm12569	ENSMUST00000074198	ENSMUSP00000156300	TRANSLATION	protein_coding	start/stop	-	5	163	0	0	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069785	Gm11444	ENSMUST00000146433	ENSMUSP00000116236	TRANSLATION	protein_coding	start	-	3	170	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000020385	Clk4	ENSMUST00000148053	ENSMUSP00000120822	TRANSLATION	nonsense_mediated_decay	-	-	3	105	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000148467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000147007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000109111	ENSMUSP00000104739	TRANSLATION	protein_coding	-	CCDS78942.1	2	301	13	7.5	9.6	159.1	0	-4,-6	-	-	10.944	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000093132	ENSMUSP00000090820	TRANSLATION	protein_coding	-	CCDS24651.1	1	481	21	9.25	8.8	179.5	0	-4,-6	-	-	20.721	PRINCIPAL:1
ENSMUSG00000020385	Clk4	ENSMUST00000146776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000140628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000153414	ENSMUSP00000115894	TRANSLATION	nonsense_mediated_decay	-	-	3	105	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000126131	ENSMUSP00000118972	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000143468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000133200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020385	Clk4	ENSMUST00000109113	ENSMUSP00000104741	TRANSLATION	protein_coding	-	CCDS78942.1	1	301	13	7.5	9.6	159.1	0	-4,-6	-	-	10.944	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000130641	ENSMUSP00000123133	TRANSLATION	protein_coding	stop	-	3	183	8	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020385	Clk4	ENSMUST00000136587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000133907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000172108	ENSMUSP00000127801	TRANSLATION	protein_coding	-	-	5	889	14	16.784	0	581.8	0	-2,0	-	-	15.21	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000154917	ENSMUSP00000127631	TRANSLATION	nonsense_mediated_decay	-	-	3	119	0	1.264	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000165489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000154372	ENSMUSP00000119644	TRANSLATION	nonsense_mediated_decay	start	-	5	81	0	0.579	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000109294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000165216	ENSMUSP00000128169	TRANSLATION	protein_coding	start	-	5	876	14	16.084	0	618.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000168743	ENSMUSP00000127127	TRANSLATION	protein_coding	start/stop	-	3	247	0	4.659	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000146833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000152820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001441	Npepps	ENSMUST00000152546	ENSMUSP00000129623	TRANSLATION	nonsense_mediated_decay	start	-	2	15	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000170506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000163164	ENSMUSP00000129361	TRANSLATION	protein_coding	start/stop	-	3	218	11	5.91	0	231.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001441	Npepps	ENSMUST00000163950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000001480	ENSMUSP00000001480	TRANSLATION	protein_coding	-	CCDS25317.1	1	920	14	17.084	1.5	618.3	0	-2,0	-	-	18	PRINCIPAL:1
ENSMUSG00000001441	Npepps	ENSMUST00000147287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000107608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000171320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001441	Npepps	ENSMUST00000167806	ENSMUSP00000130445	TRANSLATION	protein_coding	-	-	5	674	14	14.144	0	331.9	0	-2,0	-	-	6.12	MINOR
ENSMUSG00000020334	Slc22a4	ENSMUST00000020586	ENSMUSP00000020586	TRANSLATION	protein_coding	-	CCDS24689.1	1	553	0	4.47	7.5	99.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000020334	Slc22a4	ENSMUST00000146351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020334	Slc22a4	ENSMUST00000154369	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020279	Il9r	ENSMUST00000020518	ENSMUSP00000020518	TRANSLATION	nonsense_mediated_decay	-	-	5	98	0	0.6	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000020279	Il9r	ENSMUST00000145401	ENSMUSP00000118204	TRANSLATION	protein_coding	-	CCDS24517.1	1	468	0	1.68	0.5	0	2	-3,-6	-	-	5.25	PRINCIPAL:3
ENSMUSG00000020279	Il9r	ENSMUST00000142396	ENSMUSP00000119185	TRANSLATION	protein_coding	-	-	1	474	0	1.92	0	0	2	-3,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000020279	Il9r	ENSMUST00000128311	ENSMUSP00000119557	TRANSLATION	protein_coding	-	CCDS48765.1	1	469	0	1.92	1.5	0	2	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000020279	Il9r	ENSMUST00000131979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009356	Lpo	ENSMUST00000157004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009356	Lpo	ENSMUST00000136446	ENSMUSP00000117763	TRANSLATION	protein_coding	stop	-	2	145	0	1.93	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000009356	Lpo	ENSMUST00000103177	ENSMUSP00000099466	TRANSLATION	protein_coding	-	CCDS25218.1	1	710	23	9.93	1.7	588.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000017801	Mlx	ENSMUST00000107303	ENSMUSP00000102924	TRANSLATION	protein_coding	-	CCDS48936.1	1	214	0	1.544	6.5	58.5	0	-4,-5	-	-	13.683	MINOR
ENSMUSG00000017801	Mlx	ENSMUST00000149597	ENSMUSP00000121600	TRANSLATION	protein_coding	stop	-	3	127	0	1.064	0	26.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017801	Mlx	ENSMUST00000145187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017801	Mlx	ENSMUST00000149411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017801	Mlx	ENSMUST00000107302	ENSMUSP00000102923	TRANSLATION	protein_coding	-	CCDS48935.1	1	244	0	1.544	10.8	58.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000017801	Mlx	ENSMUST00000143344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017801	Mlx	ENSMUST00000017945	ENSMUSP00000017945	TRANSLATION	protein_coding	-	CCDS25447.1	1	298	0	1.544	7.5	58.5	0	-4,-5	-	-	13.989	PRINCIPAL:3
ENSMUSG00000020914	Top2a	ENSMUST00000144318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000139460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000151997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000129777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000139730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000154332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020914	Top2a	ENSMUST00000068031	ENSMUSP00000068896	TRANSLATION	protein_coding	-	CCDS25370.1	1	1528	25	26.1	0.5	867.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019326	Aoc3	ENSMUST00000017316	ENSMUSP00000017316	TRANSLATION	protein_coding	start	-	1	470	12	4.12	0	339.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000019326	Aoc3	ENSMUST00000103105	ENSMUSP00000099394	TRANSLATION	protein_coding	-	CCDS25465.1	1	765	18	7	2.7	586.4	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000039450	Dcxr	ENSMUST00000026144	ENSMUSP00000026144	TRANSLATION	protein_coding	-	CCDS25755.1	1	244	29	6.75	13.6	167.5	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000039450	Dcxr	ENSMUST00000125242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039450	Dcxr	ENSMUST00000122883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039450	Dcxr	ENSMUST00000106148	ENSMUSP00000101754	TRANSLATION	protein_coding	-	CCDS83949.1	2	236	29	6.4	0.5	116.7	0	-4,-1	-	-	14.25	MINOR
ENSMUSG00000000317	Bcl6b	ENSMUST00000153449	ENSMUSP00000121365	TRANSLATION	protein_coding	stop	-	5	116	0	2	0	69.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000317	Bcl6b	ENSMUST00000140542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000317	Bcl6b	ENSMUST00000000326	ENSMUSP00000000326	TRANSLATION	protein_coding	-	CCDS24939.1	1	474	19	6.1	1.7	131.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018547	Pip4k2b	ENSMUST00000144012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018547	Pip4k2b	ENSMUST00000018691	ENSMUSP00000018691	TRANSLATION	protein_coding	-	CCDS25329.1	1	416	2	9.25	8.8	258.6	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000025579	Gaa	ENSMUST00000026666	ENSMUSP00000026666	TRANSLATION	protein_coding	-	CCDS25713.1	1	953	4	16.07	1.5	759.7	2	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025579	Gaa	ENSMUST00000106258	ENSMUSP00000101865	TRANSLATION	protein_coding	-	-	1	231	0	1.12	0	128	2	-4,-5	-	-	0	MINOR
ENSMUSG00000025579	Gaa	ENSMUST00000128753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025579	Gaa	ENSMUST00000138510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025579	Gaa	ENSMUST00000132706	ENSMUSP00000119702	TRANSLATION	protein_coding	start/stop	-	2	272	1	6.63	0	225.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025579	Gaa	ENSMUST00000106259	ENSMUSP00000101866	TRANSLATION	protein_coding	-	CCDS25713.1	1	953	4	16.07	1.5	759.7	2	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025579	Gaa	ENSMUST00000143288	ENSMUSP00000121984	TRANSLATION	protein_coding	start	-	2	207	2	4.7	0	236.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025579	Gaa	ENSMUST00000150562	ENSMUSP00000115128	TRANSLATION	protein_coding	start	-	3	106	0	2	0	96.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017211	Gsdma2	ENSMUST00000129186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017211	Gsdma2	ENSMUST00000093938	ENSMUSP00000091470	TRANSLATION	protein_coding	-	CCDS36301.1	1	443	0	8.55	0.5	470	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017211	Gsdma2	ENSMUST00000131549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017211	Gsdma2	ENSMUST00000017355	ENSMUSP00000017355	TRANSLATION	protein_coding	-	-	1	276	0	5.05	0	241.1	0	-3,-6	-	-	0	MINOR
ENSMUSG00000017211	Gsdma2	ENSMUST00000136111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017211	Gsdma2	ENSMUST00000138686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017211	Gsdma2	ENSMUST00000127692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006169	Clint1	ENSMUST00000109260	ENSMUSP00000104883	TRANSLATION	protein_coding	-	CCDS36130.1	1	623	0	4.5	7.5	154.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000006169	Clint1	ENSMUST00000109261	ENSMUSP00000104884	TRANSLATION	protein_coding	-	CCDS83796.1	5	641	0	4.5	7.5	154.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000006169	Clint1	ENSMUST00000133715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025163	Cd7	ENSMUST00000026159	ENSMUSP00000026159	TRANSLATION	protein_coding	-	CCDS25764.1	1	210	2	0.64	0.5	35.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000025163	Cd7	ENSMUST00000163465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000108605	Olfr396-ps1	ENSMUST00000205791	ENSMUSP00000145542	TRANSLATION	protein_coding	start/stop	-	-	211	0	0	0	130.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000108605	Olfr396-ps1	ENSMUST00000143750	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000018844	Fndc8	ENSMUST00000018988	ENSMUSP00000018988	TRANSLATION	protein_coding	-	CCDS25151.1	1	321	0	0	1.5	28.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019189	Rnf145	ENSMUST00000101327	ENSMUSP00000098881	TRANSLATION	protein_coding	-	CCDS48775.1	1	266	0	0	0.5	177.3	4	-4,-7	-	-	0	MINOR
ENSMUSG00000019189	Rnf145	ENSMUST00000129676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019189	Rnf145	ENSMUST00000124959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019189	Rnf145	ENSMUST00000150257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019189	Rnf145	ENSMUST00000019333	ENSMUSP00000019333	TRANSLATION	protein_coding	-	CCDS24565.1	1	663	8	0.4	1.5	552	8	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000019189	Rnf145	ENSMUST00000127907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018425	Dhx40	ENSMUST00000018569	ENSMUSP00000018569	TRANSLATION	protein_coding	-	CCDS36268.1	1	779	10	12.345	7.5	191.6	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000018425	Dhx40	ENSMUST00000136977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018425	Dhx40	ENSMUST00000148263	ENSMUSP00000114918	TRANSLATION	protein_coding	start/stop	-	5	304	0	6.625	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018425	Dhx40	ENSMUST00000131798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020495	Smg8	ENSMUST00000020801	ENSMUSP00000020801	TRANSLATION	protein_coding	-	CCDS25207.1	1	991	0	0	6.3	1153.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000020495	Smg8	ENSMUST00000143280	ENSMUSP00000119011	TRANSLATION	protein_coding	start	-	1	271	0	0	0	339.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038268	Ovca2	ENSMUST00000123489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038268	Ovca2	ENSMUST00000071562	ENSMUSP00000071493	TRANSLATION	protein_coding	-	CCDS25041.1	1	225	4	0.66	6.3	183.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000018930	Ccl4	ENSMUST00000019074	ENSMUSP00000019074	TRANSLATION	protein_coding	-	CCDS36256.1	1	92	0	1.9	7.5	83.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000097487	Ptges3l	ENSMUST00000093933	ENSMUSP00000091465	TRANSLATION	protein_coding	-	-	1	140	0	3.44	0	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000097487	Ptges3l	ENSMUST00000103102	ENSMUSP00000099391	TRANSLATION	protein_coding	-	CCDS25468.1	1	131	0	3.44	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000097487	Ptges3l	ENSMUST00000107252	ENSMUSP00000102873	TRANSLATION	protein_coding	-	-	1	149	0	3.44	4.5	0	0	-4,-6	-	-	7	ALTERNATIVE:1
ENSMUSG00000097487	Ptges3l	ENSMUST00000150957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000097487	Ptges3l	ENSMUST00000149706	ENSMUSP00000116399	TRANSLATION	protein_coding	start	-	5	67	0	1.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038290	Smg6	ENSMUST00000135522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038290	Smg6	ENSMUST00000045281	ENSMUSP00000043555	TRANSLATION	protein_coding	-	CCDS25039.1	1	1418	0	16.58	0.5	353.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038290	Smg6	ENSMUST00000142038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038290	Smg6	ENSMUST00000140197	ENSMUSP00000120060	TRANSLATION	protein_coding	start/stop	-	5	238	0	4.3	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038290	Smg6	ENSMUST00000130145	ENSMUSP00000120229	TRANSLATION	nonsense_mediated_decay	start	-	1	356	0	6.75	0	164.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038290	Smg6	ENSMUST00000153226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048616	Nog	ENSMUST00000061728	ENSMUSP00000061427	TRANSLATION	protein_coding	-	CCDS25236.1	-	232	0	1	7.6	340.2	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000020898	Ctc1	ENSMUST00000161384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020898	Ctc1	ENSMUST00000143404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020898	Ctc1	ENSMUST00000135611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020898	Ctc1	ENSMUST00000152979	ENSMUSP00000125028	TRANSLATION	nonsense_mediated_decay	-	-	1	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020898	Ctc1	ENSMUST00000161271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020898	Ctc1	ENSMUST00000021278	ENSMUSP00000021278	TRANSLATION	protein_coding	-	CCDS48824.1	1	1211	0	0	0.5	2016.5	0	-4,-5	-	-	5.856	ALTERNATIVE:2
ENSMUSG00000020898	Ctc1	ENSMUST00000162256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020898	Ctc1	ENSMUST00000146621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020898	Ctc1	ENSMUST00000154126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020898	Ctc1	ENSMUST00000123871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020898	Ctc1	ENSMUST00000116359	ENSMUSP00000112063	TRANSLATION	protein_coding	-	CCDS36189.2	1	1212	0	0	0.5	2018.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020898	Ctc1	ENSMUST00000161455	ENSMUSP00000124702	TRANSLATION	protein_coding	-	CCDS70214.1	2	965	0	0	0.5	1657	0	-4,-6	-	-	0	MINOR
ENSMUSG00000056921	Olfr394	ENSMUST00000071478	ENSMUSP00000071415	TRANSLATION	protein_coding	-	CCDS25019.1	-	310	0	0.42	2.7	187.2	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056921	Olfr394	ENSMUST00000216608	ENSMUSP00000149527	TRANSLATION	protein_coding	-	CCDS25019.1	5	310	0	0.42	2.7	187.2	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056921	Olfr394	ENSMUST00000214284	ENSMUSP00000150236	TRANSLATION	protein_coding	-	CCDS25019.1	5	310	0	0.42	2.7	187.2	6	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018776	Slc35g3	ENSMUST00000231829	ENSMUSP00000156297	TRANSLATION	protein_coding	-	CCDS24908.1	-	362	0	0	0.5	0	8	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000018776	Slc35g3	ENSMUST00000102586	ENSMUSP00000099646	TRANSLATION	protein_coding	-	-	1	340	0	0	3.4	0	8	-4,-6	-	-	1	ALTERNATIVE:2
ENSMUSG00000045980	Tmem104	ENSMUST00000156230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045980	Tmem104	ENSMUST00000100235	ENSMUSP00000097807	TRANSLATION	protein_coding	-	-	1	495	0	0	6.3	76.5	7	-4,-6	-	-	7.778	ALTERNATIVE:1
ENSMUSG00000045980	Tmem104	ENSMUST00000135536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045980	Tmem104	ENSMUST00000061450	ENSMUSP00000056805	TRANSLATION	protein_coding	-	CCDS25623.1	1	496	0	0	6.3	79.4	7	-4,-6	-	-	8	PRINCIPAL:2
ENSMUSG00000052921	Arhgef15	ENSMUST00000141747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052921	Arhgef15	ENSMUST00000108670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052921	Arhgef15	ENSMUST00000151520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052921	Arhgef15	ENSMUST00000108671	ENSMUSP00000104311	TRANSLATION	protein_coding	-	CCDS24873.1	5	849	0	4.29	1.5	110.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000052921	Arhgef15	ENSMUST00000131686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052921	Arhgef15	ENSMUST00000065040	ENSMUSP00000067684	TRANSLATION	protein_coding	-	CCDS24873.1	5	849	0	4.29	1.5	110.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041164	Zmiz2	ENSMUST00000109785	ENSMUSP00000105408	TRANSLATION	protein_coding	-	-	5	894	4	2.67	3.9	81.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000041164	Zmiz2	ENSMUST00000109787	ENSMUSP00000105410	TRANSLATION	protein_coding	-	CCDS24418.1	5	920	4	2.67	3.9	81.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000041164	Zmiz2	ENSMUST00000109786	ENSMUSP00000105409	TRANSLATION	protein_coding	-	CCDS24418.1	5	920	4	2.67	3.9	81.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000041164	Zmiz2	ENSMUST00000102914	ENSMUSP00000099978	TRANSLATION	protein_coding	-	CCDS24417.1	1	888	4	2.67	2.7	81.3	0	-4,-5	-	-	16.586	PRINCIPAL:3
ENSMUSG00000041164	Zmiz2	ENSMUST00000124588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041164	Zmiz2	ENSMUST00000012612	ENSMUSP00000012612	TRANSLATION	protein_coding	-	CCDS24418.1	5	920	4	2.67	3.9	81.3	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000018841	Rad51d	ENSMUST00000100718	ENSMUSP00000098284	TRANSLATION	nonsense_mediated_decay	-	-	1	109	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018841	Rad51d	ENSMUST00000021033	ENSMUSP00000021033	TRANSLATION	protein_coding	-	CCDS70268.1	1	275	7	5.178	3.9	55.9	0	-4,-7	-	-	14.932	MINOR
ENSMUSG00000018841	Rad51d	ENSMUST00000018985	ENSMUSP00000018985	TRANSLATION	protein_coding	-	CCDS36250.1	1	329	7	6.228	5.1	92.7	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000018841	Rad51d	ENSMUST00000092844	ENSMUSP00000090520	TRANSLATION	protein_coding	-	CCDS70267.1	1	284	7	5.808	1.7	58.3	0	-4,-7	-	-	15.276	MINOR
ENSMUSG00000018841	Rad51d	ENSMUST00000146053	ENSMUSP00000117401	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018841	Rad51d	ENSMUST00000135963	ENSMUSP00000122477	TRANSLATION	nonsense_mediated_decay	-	-	1	233	7	4.704	0	65.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018541	Cwc25	ENSMUST00000152395	ENSMUSP00000122738	TRANSLATION	protein_coding	start	-	2	132	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000018541	Cwc25	ENSMUST00000124356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018541	Cwc25	ENSMUST00000107579	ENSMUSP00000103205	TRANSLATION	protein_coding	-	-	1	206	0	0.93	0	113.2	0	-4,-5	-	-	10.938	ALTERNATIVE:2
ENSMUSG00000018541	Cwc25	ENSMUST00000018685	ENSMUSP00000018685	TRANSLATION	protein_coding	-	CCDS25330.1	1	416	0	0.93	1.5	130.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000146033	ENSMUSP00000116943	TRANSLATION	protein_coding	stop	-	5	73	0	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000010286	ENSMUSP00000010286	TRANSLATION	protein_coding	-	CCDS24806.1	1	249	0	1.13	1.5	74.8	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000139422	ENSMUSP00000116175	TRANSLATION	protein_coding	stop	-	5	140	0	1.13	0	74.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000130708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000123378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000101103	ENSMUSP00000098662	TRANSLATION	protein_coding	-	CCDS24806.1	1	249	0	1.13	1.5	74.8	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000010142	Tnfrsf13b	ENSMUST00000137832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002058	Unc119	ENSMUST00000155471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002058	Unc119	ENSMUST00000149161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002058	Unc119	ENSMUST00000125720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002058	Unc119	ENSMUST00000100755	ENSMUSP00000098318	TRANSLATION	protein_coding	-	CCDS83854.1	2	175	0	4.066	0.5	256.1	0	-4,-5	-	-	10.134	MINOR
ENSMUSG00000002058	Unc119	ENSMUST00000108295	ENSMUSP00000103930	TRANSLATION	protein_coding	-	CCDS83853.1	3	262	0	5	0.5	238.9	0	-4,-6	-	-	10.968	MINOR
ENSMUSG00000002058	Unc119	ENSMUST00000002127	ENSMUSP00000002127	TRANSLATION	protein_coding	-	CCDS25101.1	1	240	0	5	7.5	256.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000002058	Unc119	ENSMUST00000154700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037573	Tob1	ENSMUST00000041589	ENSMUSP00000036039	TRANSLATION	protein_coding	-	CCDS25250.1	1	362	0	0.8	0.5	128.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000093938	Evi2b	ENSMUST00000179322	ENSMUSP00000136153	TRANSLATION	protein_coding	-	CCDS25121.1	1	444	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000017639	Rab11fip4	ENSMUST00000017783	ENSMUSP00000017783	TRANSLATION	protein_coding	-	CCDS25123.1	1	635	5	1.8	2.9	66.1	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000017639	Rab11fip4	ENSMUST00000155381	ENSMUSP00000114971	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020434	4921536K21Rik	ENSMUST00000020712	ENSMUSP00000020712	TRANSLATION	protein_coding	-	CCDS24368.1	1	168	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000063564	Col23a1	ENSMUST00000102765	ENSMUSP00000099826	TRANSLATION	protein_coding	-	CCDS24652.1	5	532	0	9.166	0.5	185.9	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063564	Col23a1	ENSMUST00000151098	ENSMUSP00000119825	TRANSLATION	protein_coding	start	-	5	95	0	1.232	0	39.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000594	Gm2a	ENSMUST00000000608	ENSMUSP00000000608	TRANSLATION	protein_coding	-	CCDS24707.1	1	193	0	3	0.5	114.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000202	Btbd17	ENSMUST00000156053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000202	Btbd17	ENSMUST00000141386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000202	Btbd17	ENSMUST00000146853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000202	Btbd17	ENSMUST00000000206	ENSMUSP00000000206	TRANSLATION	protein_coding	-	CCDS25610.1	1	478	0	0	7.5	102	0	0,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000000202	Btbd17	ENSMUST00000141481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000202	Btbd17	ENSMUST00000137965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000202	Btbd17	ENSMUST00000156192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000123485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000148782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000125097	ENSMUSP00000118024	TRANSLATION	protein_coding	stop	-	2	117	0	3.16	0	130.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020740	Gga3	ENSMUST00000123831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000019135	ENSMUSP00000019135	TRANSLATION	protein_coding	-	CCDS25641.1	1	718	5	13.38	0.5	327.8	0	-4,-5	-	-	17	PRINCIPAL:3
ENSMUSG00000020740	Gga3	ENSMUST00000106508	ENSMUSP00000102117	TRANSLATION	protein_coding	-	CCDS56817.1	1	640	5	13.38	0.5	327.8	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000020740	Gga3	ENSMUST00000156173	ENSMUSP00000138597	TRANSLATION	nonsense_mediated_decay	-	-	1	595	0	9.55	0	230.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020740	Gga3	ENSMUST00000136790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000128437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000149814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000132503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020740	Gga3	ENSMUST00000154832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041895	Wipi1	ENSMUST00000153738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041895	Wipi1	ENSMUST00000103060	ENSMUSP00000099349	TRANSLATION	protein_coding	-	CCDS25582.1	1	446	0	3.95	10.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000041895	Wipi1	ENSMUST00000047186	ENSMUSP00000038635	TRANSLATION	protein_coding	-	-	1	437	0	3.95	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000041895	Wipi1	ENSMUST00000106689	ENSMUSP00000102300	TRANSLATION	protein_coding	-	-	1	295	0	3.95	0	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000052642	Lypd9	ENSMUST00000064614	ENSMUSP00000063665	TRANSLATION	protein_coding	-	CCDS24731.1	1	145	0	0	0.5	20.7	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000047444	Olfr139	ENSMUST00000125093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047444	Olfr139	ENSMUST00000050678	ENSMUSP00000049558	TRANSLATION	protein_coding	-	CCDS25023.1	-	315	0	0.36	4.1	187.7	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000047444	Olfr139	ENSMUST00000206280	ENSMUSP00000146141	TRANSLATION	protein_coding	-	CCDS25023.1	3	315	0	0.36	4.1	187.7	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000047444	Olfr139	ENSMUST00000214111	ENSMUSP00000148999	TRANSLATION	protein_coding	-	CCDS25023.1	5	315	0	0.36	4.1	187.7	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000050132	Sarm1	ENSMUST00000170674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050132	Sarm1	ENSMUST00000061174	ENSMUSP00000051059	TRANSLATION	protein_coding	-	CCDS25105.1	1	724	0	1.96	6.3	163.7	0	-4,-2	-	-	13.16	PRINCIPAL:1
ENSMUSG00000050132	Sarm1	ENSMUST00000153534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050132	Sarm1	ENSMUST00000130955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050132	Sarm1	ENSMUST00000108287	ENSMUSP00000103922	TRANSLATION	protein_coding	-	CCDS48857.1	1	764	0	2.28	0.5	160.3	0	-4,-2	-	-	11.796	MINOR
ENSMUSG00000020477	Mrps24	ENSMUST00000132874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020477	Mrps24	ENSMUST00000154330	ENSMUSP00000119535	TRANSLATION	protein_coding	-	CCDS24402.1	1	167	0	3.25	1.5	195.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000020477	Mrps24	ENSMUST00000149980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020477	Mrps24	ENSMUST00000123697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020477	Mrps24	ENSMUST00000020770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017686	Rhot1	ENSMUST00000092857	ENSMUSP00000090533	TRANSLATION	protein_coding	-	CCDS25130.1	1	631	31	14.44	6.3	315.9	2	-4,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000017686	Rhot1	ENSMUST00000135947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017686	Rhot1	ENSMUST00000236882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017686	Rhot1	ENSMUST00000055056	ENSMUSP00000057669	TRANSLATION	protein_coding	-	CCDS48862.1	1	672	31	14.44	5.3	315	2	-4,-2	-	-	19.568	ALTERNATIVE:1
ENSMUSG00000017686	Rhot1	ENSMUST00000077451	ENSMUSP00000076664	TRANSLATION	protein_coding	-	-	5	704	31	14.44	6.3	315	2	-4,-2	-	-	19.946	ALTERNATIVE:1
ENSMUSG00000017686	Rhot1	ENSMUST00000237515	ENSMUSP00000158504	TRANSLATION	protein_coding	start	-	-	214	5	1.8	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000017686	Rhot1	ENSMUST00000134148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017686	Rhot1	ENSMUST00000134894	ENSMUSP00000117941	TRANSLATION	protein_coding	start	-	1	434	19	9.55	0	237.2	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000017686	Rhot1	ENSMUST00000154362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017686	Rhot1	ENSMUST00000151518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017686	Rhot1	ENSMUST00000017831	ENSMUSP00000017831	TRANSLATION	protein_coding	-	CCDS48861.1	1	663	31	13.94	5.3	315.9	2	-4,-2	-	-	18.62	MINOR
ENSMUSG00000075610	Tmem92	ENSMUST00000162809	ENSMUSP00000125159	TRANSLATION	protein_coding	-	CCDS48890.1	1	162	0	0	0.5	28.9	1	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000075610	Tmem92	ENSMUST00000100554	ENSMUSP00000128300	TRANSLATION	protein_coding	-	CCDS36285.1	1	114	0	0	0.5	0	2	1,-3	-	-	0	MINOR
ENSMUSG00000075610	Tmem92	ENSMUST00000143620	ENSMUSP00000129874	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000048070	Pirt	ENSMUST00000123434	ENSMUSP00000128117	TRANSLATION	protein_coding	-	CCDS24849.1	1	135	0	0	5.1	213.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000020544	Cox11	ENSMUST00000099960	ENSMUSP00000097543	TRANSLATION	protein_coding	-	-	2	135	0	2.8	0	185.4	0	-4,-5	-	-	10.176	MINOR
ENSMUSG00000020544	Cox11	ENSMUST00000020851	ENSMUSP00000020851	TRANSLATION	protein_coding	-	CCDS25243.1	1	275	0	2.95	1.5	210.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000010080	Epn3	ENSMUST00000142992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010080	Epn3	ENSMUST00000010224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010080	Epn3	ENSMUST00000150526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010080	Epn3	ENSMUST00000127305	ENSMUSP00000121390	TRANSLATION	protein_coding	-	CCDS25257.1	1	636	9	1	0.5	198.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000016940	Kctd2	ENSMUST00000106533	ENSMUSP00000102143	TRANSLATION	protein_coding	-	-	1	338	0	4.8	0	79.6	0	-4,-5	-	-	11.34	MINOR
ENSMUSG00000016940	Kctd2	ENSMUST00000143775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016940	Kctd2	ENSMUST00000143856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016940	Kctd2	ENSMUST00000123345	ENSMUSP00000115862	TRANSLATION	protein_coding	start	-	3	278	0	4.8	0	79.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016940	Kctd2	ENSMUST00000103035	ENSMUSP00000099324	TRANSLATION	protein_coding	-	CCDS25634.1	1	263	0	5.13	6.3	79.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000061666	Gdpd1	ENSMUST00000020804	ENSMUSP00000020804	TRANSLATION	protein_coding	-	CCDS25206.1	1	314	7	4.9	11.5	86.4	0	-3,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000020902	Ntn1	ENSMUST00000135141	ENSMUSP00000121193	TRANSLATION	protein_coding	stop	-	2	159	4	1	0	124.8	0	3,-1	-	-	-1	MINOR
ENSMUSG00000020902	Ntn1	ENSMUST00000021284	ENSMUSP00000021284	TRANSLATION	protein_coding	-	CCDS24864.1	5	604	6	4.3	7.5	512.1	0	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000020902	Ntn1	ENSMUST00000108674	ENSMUSP00000104314	TRANSLATION	protein_coding	-	CCDS24864.1	5	604	6	4.3	7.5	512.1	0	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000010554	Mettl16	ENSMUST00000010698	ENSMUSP00000010698	TRANSLATION	protein_coding	-	-	1	593	23	5.58	0	431.8	0	-4,-7	-	-	15.828	MINOR
ENSMUSG00000010554	Mettl16	ENSMUST00000092912	ENSMUSP00000090590	TRANSLATION	nonsense_mediated_decay	-	-	1	215	22	3.33	0	314.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010554	Mettl16	ENSMUST00000134571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010554	Mettl16	ENSMUST00000144692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010554	Mettl16	ENSMUST00000141755	ENSMUSP00000114682	TRANSLATION	protein_coding	-	CCDS25036.1	1	553	23	6.08	0.5	451.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000010554	Mettl16	ENSMUST00000128504	ENSMUSP00000122272	TRANSLATION	protein_coding	stop	-	2	33	0	0	0	38.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020280	Pus10	ENSMUST00000143117	ENSMUSP00000117934	TRANSLATION	protein_coding	stop	-	3	139	4	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020280	Pus10	ENSMUST00000139646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020280	Pus10	ENSMUST00000136365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020280	Pus10	ENSMUST00000020520	ENSMUSP00000020520	TRANSLATION	protein_coding	-	CCDS24479.1	1	527	4	13.5	3.9	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000020280	Pus10	ENSMUST00000109525	ENSMUSP00000105151	TRANSLATION	protein_coding	-	CCDS24479.1	1	527	4	13.5	3.9	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000020280	Pus10	ENSMUST00000058163	ENSMUSP00000050395	TRANSLATION	protein_coding	-	CCDS24479.1	1	527	4	13.5	3.9	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000020280	Pus10	ENSMUST00000142287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042709	Atpaf2	ENSMUST00000145532	ENSMUSP00000135761	TRANSLATION	nonsense_mediated_decay	-	-	5	145	0	1.82	0	101	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042709	Atpaf2	ENSMUST00000108721	ENSMUSP00000104361	TRANSLATION	protein_coding	-	-	1	289	0	3.77	3.6	133.8	0	-4,-2	-	-	13	ALTERNATIVE:2
ENSMUSG00000042709	Atpaf2	ENSMUST00000138696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042709	Atpaf2	ENSMUST00000239016	ENSMUSP00000159091	TRANSLATION	protein_coding	-	CCDS24789.2	-	298	0	3.77	1.5	133.8	0	-4,0	-	-	12.192	PRINCIPAL:2
ENSMUSG00000042709	Atpaf2	ENSMUST00000154387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042709	Atpaf2	ENSMUST00000141987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042709	Atpaf2	ENSMUST00000156966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025173	Wdr45b	ENSMUST00000127373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025173	Wdr45b	ENSMUST00000026173	ENSMUSP00000026173	TRANSLATION	protein_coding	-	CCDS25773.1	1	344	0	5.2	16.3	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000025173	Wdr45b	ENSMUST00000106110	ENSMUSP00000101716	TRANSLATION	protein_coding	stop	-	5	218	0	3.29	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025173	Wdr45b	ENSMUST00000136797	ENSMUSP00000119591	TRANSLATION	protein_coding	stop	-	3	172	0	2.97	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025173	Wdr45b	ENSMUST00000137230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078253	Krtap16-1	ENSMUST00000105050	ENSMUSP00000100671	TRANSLATION	protein_coding	-	CCDS56804.1	-	502	0	0	0.5	72.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037907	Ankrd13b	ENSMUST00000037593	ENSMUSP00000073584	TRANSLATION	protein_coding	-	-	1	626	0	2.04	1.5	382	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000037907	Ankrd13b	ENSMUST00000145934	ENSMUSP00000119633	TRANSLATION	protein_coding	start	-	2	345	0	0	0	275.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037907	Ankrd13b	ENSMUST00000092892	ENSMUSP00000090568	TRANSLATION	protein_coding	-	CCDS36233.1	5	696	0	2.04	0.5	382	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000037907	Ankrd13b	ENSMUST00000135227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037907	Ankrd13b	ENSMUST00000143872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037907	Ankrd13b	ENSMUST00000127291	ENSMUSP00000118247	TRANSLATION	protein_coding	start/stop	-	5	213	0	0	0	78.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018765	Fxr2	ENSMUST00000125989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018765	Fxr2	ENSMUST00000125586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018765	Fxr2	ENSMUST00000139605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018765	Fxr2	ENSMUST00000018909	ENSMUSP00000018909	TRANSLATION	protein_coding	-	CCDS24901.1	1	674	0	9.5	5.1	331.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000018765	Fxr2	ENSMUST00000155513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018765	Fxr2	ENSMUST00000132742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032807	Alox12b	ENSMUST00000036424	ENSMUSP00000035250	TRANSLATION	protein_coding	-	CCDS24885.1	1	701	5	12.43	7.5	78.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000017588	Krt27	ENSMUST00000017732	ENSMUSP00000017732	TRANSLATION	protein_coding	-	CCDS25379.1	1	448	0	4.075	1.5	337.6	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000017802	Retreg3	ENSMUST00000107295	ENSMUSP00000102916	TRANSLATION	protein_coding	-	CCDS25450.1	1	285	0	0	0.5	0	2	-1,-5	-	-	0	MINOR
ENSMUSG00000017802	Retreg3	ENSMUST00000147201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017802	Retreg3	ENSMUST00000017946	ENSMUSP00000017946	TRANSLATION	protein_coding	-	CCDS25449.1	1	466	0	0	7.5	0	4	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000017802	Retreg3	ENSMUST00000154513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017802	Retreg3	ENSMUST00000142733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042363	Lgalsl	ENSMUST00000132928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042363	Lgalsl	ENSMUST00000154300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042363	Lgalsl	ENSMUST00000047028	ENSMUSP00000044342	TRANSLATION	protein_coding	-	CCDS24461.1	1	172	0	3.3	12.4	99.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042363	Lgalsl	ENSMUST00000144441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043880	Olfr323	ENSMUST00000070804	ENSMUSP00000068147	TRANSLATION	protein_coding	-	CCDS24737.1	-	323	0	1.26	2.7	183.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043880	Olfr323	ENSMUST00000214132	ENSMUSP00000151137	TRANSLATION	protein_coding	-	CCDS24737.1	5	323	0	1.26	2.7	183.8	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043880	Olfr323	ENSMUST00000203173	ENSMUSP00000145459	TRANSLATION	protein_coding	start/stop	-	1	137	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000020884	Asgr1	ENSMUST00000018699	ENSMUSP00000018699	TRANSLATION	protein_coding	-	CCDS24933.1	1	284	13	3.669	2.7	258.7	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020884	Asgr1	ENSMUST00000108585	ENSMUSP00000104226	TRANSLATION	protein_coding	-	CCDS70224.1	5	255	13	3.564	0.5	213.3	2	-4,-6	-	-	15.066	MINOR
ENSMUSG00000020884	Asgr1	ENSMUST00000123369	ENSMUSP00000137469	TRANSLATION	protein_coding	stop	-	5	132	4	2.405	0	108.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020884	Asgr1	ENSMUST00000146411	ENSMUSP00000121842	TRANSLATION	protein_coding	-	CCDS24933.1	1	284	13	3.669	2.7	258.7	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020884	Asgr1	ENSMUST00000092959	ENSMUSP00000090637	TRANSLATION	protein_coding	-	CCDS24933.1	2	284	13	3.669	2.7	258.7	2	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000040463	Mybbp1a	ENSMUST00000144923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000152894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000156833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000134119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000144374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000155995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000162048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040463	Mybbp1a	ENSMUST00000045633	ENSMUSP00000044827	TRANSLATION	protein_coding	-	CCDS24986.1	1	1344	0	0	0.5	630.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000018433	Nol11	ENSMUST00000122966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018433	Nol11	ENSMUST00000106757	ENSMUSP00000102368	TRANSLATION	protein_coding	-	CCDS48965.1	1	703	0	0	0.5	79.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000018433	Nol11	ENSMUST00000136917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018433	Nol11	ENSMUST00000018577	ENSMUSP00000018577	TRANSLATION	protein_coding	-	CCDS25566.1	1	723	0	0	0.5	79.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000018433	Nol11	ENSMUST00000139168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051481	Krtap31-2	ENSMUST00000058761	ENSMUSP00000055035	TRANSLATION	protein_coding	-	CCDS36328.1	-	177	0	0	0.5	47.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057674	Gm11938	ENSMUST00000072306	ENSMUSP00000072150	TRANSLATION	protein_coding	-	CCDS48909.1	-	131	0	0	5.1	38.2	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000070354	Evi2	ENSMUST00000170422	ENSMUSP00000128569	TRANSLATION	protein_coding	-	CCDS25121.1	1	444	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000070354	Evi2	ENSMUST00000093983	ENSMUSP00000091519	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	77	0	0	0	62.6	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000034471	Caskin2	ENSMUST00000125658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034471	Caskin2	ENSMUST00000132780	ENSMUSP00000119158	TRANSLATION	protein_coding	stop	-	3	245	0	5.466	0	135.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034471	Caskin2	ENSMUST00000041684	ENSMUSP00000041328	TRANSLATION	protein_coding	-	CCDS25647.1	1	1201	0	11.53	1.5	471.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034471	Caskin2	ENSMUST00000156812	ENSMUSP00000114310	TRANSLATION	protein_coding	stop	-	3	110	0	2.55	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018339	Gpx3	ENSMUST00000149324	ENSMUSP00000119882	TRANSLATION	protein_coding	stop	-	3	217	0	4.3	0	133	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018339	Gpx3	ENSMUST00000125094	ENSMUSP00000119165	TRANSLATION	protein_coding	stop	-	3	199	0	4.8	0	144.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000018339	Gpx3	ENSMUST00000082430	ENSMUSP00000081011	TRANSLATION	protein_coding	-	CCDS24703.1	1	226	0	5.55	7.5	144.4	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000040850	Psme4	ENSMUST00000150219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040850	Psme4	ENSMUST00000142217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040850	Psme4	ENSMUST00000041231	ENSMUSP00000045460	TRANSLATION	protein_coding	-	CCDS36124.1	1	1843	0	0	6.3	507.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000040850	Psme4	ENSMUST00000133430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040850	Psme4	ENSMUST00000129824	ENSMUSP00000114537	TRANSLATION	protein_coding	start	-	3	107	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040850	Psme4	ENSMUST00000154757	ENSMUSP00000119133	TRANSLATION	protein_coding	start/stop	-	3	219	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000040850	Psme4	ENSMUST00000155719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018293	Pfn1	ENSMUST00000178254	ENSMUSP00000136219	TRANSLATION	nonsense_mediated_decay	-	-	2	55	0	1	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018293	Pfn1	ENSMUST00000018437	ENSMUSP00000018437	TRANSLATION	protein_coding	-	CCDS24960.1	1	140	0	3.66	9.6	94.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018293	Pfn1	ENSMUST00000177669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018293	Pfn1	ENSMUST00000108549	ENSMUSP00000104189	TRANSLATION	protein_coding	-	-	2	112	0	2.66	0	67.2	0	-4,-5	-	-	8.256	MINOR
ENSMUSG00000020523	Fam114a2	ENSMUST00000130596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020523	Fam114a2	ENSMUST00000020831	ENSMUSP00000020831	TRANSLATION	protein_coding	-	CCDS24717.1	1	490	0	0	0.5	226.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000020523	Fam114a2	ENSMUST00000129596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020523	Fam114a2	ENSMUST00000108850	ENSMUSP00000104478	TRANSLATION	protein_coding	-	CCDS48801.1	1	497	0	0	0.5	226.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000042371	Slc5a10	ENSMUST00000148584	ENSMUSP00000114523	TRANSLATION	protein_coding	-	CCDS24818.1	1	596	0	7.545	2.7	456.9	14	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042371	Slc5a10	ENSMUST00000151780	ENSMUSP00000118196	TRANSLATION	protein_coding	start	-	5	567	0	6.945	1.2	258.4	14	-4,-7	-	-	-1	MINOR
ENSMUSG00000042371	Slc5a10	ENSMUST00000128196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042371	Slc5a10	ENSMUST00000051552	ENSMUSP00000054407	TRANSLATION	protein_coding	-	CCDS24818.1	1	596	0	7.545	2.7	456.9	14	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020766	Galk1	ENSMUST00000021114	ENSMUSP00000021114	TRANSLATION	protein_coding	-	CCDS25654.1	1	392	17	7.75	5.1	170.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020867	Spata20	ENSMUST00000136362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020867	Spata20	ENSMUST00000151707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020867	Spata20	ENSMUST00000125310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020867	Spata20	ENSMUST00000134332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020867	Spata20	ENSMUST00000041705	ENSMUSP00000042572	TRANSLATION	protein_coding	-	CCDS25256.1	1	790	0	3.35	3.9	240.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000018415	Gid4	ENSMUST00000070681	ENSMUSP00000064926	TRANSLATION	protein_coding	-	CCDS24790.1	1	217	0	0	4	209.6	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000018415	Gid4	ENSMUST00000139477	ENSMUSP00000135441	TRANSLATION	nonsense_mediated_decay	-	-	2	217	0	0	4	209.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018750	Zbtb4	ENSMUST00000153943	ENSMUSP00000118027	TRANSLATION	protein_coding	stop	-	5	50	0	1	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018750	Zbtb4	ENSMUST00000108640	ENSMUSP00000104280	TRANSLATION	protein_coding	-	CCDS36197.2	1	982	18	2.18	0.5	107.3	0	-4,-5	-	-	17.838	PRINCIPAL:1
ENSMUSG00000018750	Zbtb4	ENSMUST00000108639	ENSMUSP00000104279	TRANSLATION	protein_coding	-	CCDS36197.2	1	982	18	2.18	0.5	107.3	0	-4,-5	-	-	17.838	PRINCIPAL:1
ENSMUSG00000018750	Zbtb4	ENSMUST00000156932	ENSMUSP00000115687	TRANSLATION	protein_coding	stop	-	3	136	0	1.16	0	26.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018750	Zbtb4	ENSMUST00000132528	ENSMUSP00000121694	TRANSLATION	protein_coding	stop	-	2	56	0	1	0	43.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018750	Zbtb4	ENSMUST00000108638	ENSMUSP00000104278	TRANSLATION	protein_coding	-	-	1	364	8	2.24	0	91.4	0	-4,-5	-	-	11.046	MINOR
ENSMUSG00000018750	Zbtb4	ENSMUST00000108642	ENSMUSP00000104282	TRANSLATION	protein_coding	-	-	5	219	0	1.08	0	58.2	0	-4,-5	-	-	5.946	MINOR
ENSMUSG00000020453	Patz1	ENSMUST00000136285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000093402	ENSMUSP00000091103	TRANSLATION	protein_coding	-	CCDS56754.1	2	537	25	1.87	6.3	175.4	0	-4,-5	-	-	9.267	MINOR
ENSMUSG00000020453	Patz1	ENSMUST00000110043	ENSMUSP00000105670	TRANSLATION	protein_coding	-	-	5	687	31	2.43	7	327.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020453	Patz1	ENSMUST00000134089	ENSMUSP00000138522	TRANSLATION	protein_coding	-	-	1	102	8	1.05	0	0	0	-4,-6	-	-	2.592	MINOR
ENSMUSG00000020453	Patz1	ENSMUST00000123983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000153603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000142561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000101644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000057089	ENSMUSP00000050684	TRANSLATION	protein_coding	-	CCDS24356.1	1	641	28	1.665	6.3	296.1	0	-4,-5	-	-	14.901	MINOR
ENSMUSG00000020453	Patz1	ENSMUST00000094471	ENSMUSP00000092043	TRANSLATION	protein_coding	-	-	1	537	15	1.3	5.8	149.4	0	-4,-5	-	-	5.61	MINOR
ENSMUSG00000020453	Patz1	ENSMUST00000144396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020453	Patz1	ENSMUST00000154319	ENSMUSP00000122832	TRANSLATION	protein_coding	stop	-	5	70	7	0.48	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000384	Tbrg4	ENSMUST00000189268	ENSMUSP00000140835	TRANSLATION	protein_coding	-	CCDS24423.1	1	630	0	0	1.5	196.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000000384	Tbrg4	ENSMUST00000136682	ENSMUSP00000114174	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000000384	Tbrg4	ENSMUST00000131815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000384	Tbrg4	ENSMUST00000151008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000384	Tbrg4	ENSMUST00000156969	ENSMUSP00000114256	TRANSLATION	nonsense_mediated_decay	-	-	1	630	0	0	1.5	196.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000000384	Tbrg4	ENSMUST00000150697	ENSMUSP00000123131	TRANSLATION	nonsense_mediated_decay	-	-	1	365	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000000384	Tbrg4	ENSMUST00000134016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000384	Tbrg4	ENSMUST00000131477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000384	Tbrg4	ENSMUST00000132446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000384	Tbrg4	ENSMUST00000144463	ENSMUSP00000120103	TRANSLATION	protein_coding	stop	-	3	112	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000000384	Tbrg4	ENSMUST00000000394	ENSMUSP00000000394	TRANSLATION	protein_coding	-	CCDS24423.1	1	630	0	0	1.5	196.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000000384	Tbrg4	ENSMUST00000131313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069835	Sat2	ENSMUST00000092969	ENSMUSP00000090647	TRANSLATION	protein_coding	-	CCDS36194.1	1	170	22	4.5	7.6	68.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000069835	Sat2	ENSMUST00000108656	ENSMUSP00000104296	TRANSLATION	protein_coding	-	CCDS36194.1	1	170	22	4.5	7.6	68.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000069835	Sat2	ENSMUST00000151255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020709	Adap2	ENSMUST00000021050	ENSMUSP00000021050	TRANSLATION	protein_coding	-	CCDS25128.1	1	381	4	8.475	5.1	183.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020709	Adap2	ENSMUST00000134118	ENSMUSP00000130731	TRANSLATION	nonsense_mediated_decay	-	-	2	133	4	3.45	0	114	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069804	Gm10277	ENSMUST00000092883	ENSMUSP00000090559	TRANSLATION	protein_coding	-	-	-	214	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000018286	Psmb6	ENSMUST00000128870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018286	Psmb6	ENSMUST00000148535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018286	Psmb6	ENSMUST00000145503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018286	Psmb6	ENSMUST00000018430	ENSMUSP00000018430	TRANSLATION	protein_coding	-	CCDS48836.1	1	238	4	5.75	5.1	157.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000057003	Myh4	ENSMUST00000170942	ENSMUSP00000127514	TRANSLATION	protein_coding	-	CCDS24856.1	1	1939	15	36.63	12.8	1539.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000057003	Myh4	ENSMUST00000018632	ENSMUSP00000018632	TRANSLATION	protein_coding	-	CCDS24856.1	5	1939	15	36.63	12.8	1539.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000078249	Hmga1b	ENSMUST00000178955	ENSMUSP00000137252	TRANSLATION	protein_coding	-	-	-	39	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000078249	Hmga1b	ENSMUST00000105046	ENSMUSP00000100667	TRANSLATION	protein_coding	-	CCDS49010.1	-	107	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000034329	Brip1	ENSMUST00000149748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034329	Brip1	ENSMUST00000044423	ENSMUSP00000043108	TRANSLATION	protein_coding	-	CCDS25197.1	1	1174	0	5.05	0.5	359.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034329	Brip1	ENSMUST00000123366	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020333	Acsl6	ENSMUST00000064690	ENSMUSP00000069844	TRANSLATION	protein_coding	-	-	1	359	7	5.279	0	158	2	-4,-6	-	-	0	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000127731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020333	Acsl6	ENSMUST00000000145	ENSMUSP00000000145	TRANSLATION	protein_coding	-	-	5	622	23	9.734	1.2	344.1	0	-4,-5	-	-	12.66	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000138515	ENSMUSP00000117128	TRANSLATION	protein_coding	stop	-	5	192	0	1.815	0	62.6	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000156252	ENSMUSP00000119714	TRANSLATION	protein_coding	stop	-	5	365	7	6.179	0	194.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000094194	ENSMUSP00000091746	TRANSLATION	protein_coding	-	CCDS24696.1	5	697	24	10.514	8.8	393.3	2	-4,-6	-	-	20.76	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000139484	ENSMUSP00000120693	TRANSLATION	protein_coding	start	-	3	126	5	2.28	0	94.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000108904	ENSMUSP00000104532	TRANSLATION	protein_coding	-	CCDS24694.1	1	722	24	10.634	7.8	391.1	2	-2,-5	-	-	20.484	PRINCIPAL:5
ENSMUSG00000020333	Acsl6	ENSMUST00000101213	ENSMUSP00000098773	TRANSLATION	protein_coding	-	CCDS24697.1	1	697	24	10.634	8.8	391.1	2	-4,-6	-	-	20.868	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000093106	ENSMUSP00000090795	TRANSLATION	protein_coding	-	CCDS24696.1	1	697	24	10.514	8.8	393.3	2	-4,-6	-	-	20.76	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000108905	ENSMUSP00000104533	TRANSLATION	protein_coding	-	CCDS24695.1	1	722	24	10.514	7.8	393.3	2	-2,-5	-	-	20.376	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000072178	ENSMUSP00000072040	TRANSLATION	protein_coding	-	CCDS24696.1	5	697	24	10.514	8.8	393.3	2	-4,-6	-	-	20.76	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000101211	ENSMUSP00000098771	TRANSLATION	protein_coding	-	CCDS24697.1	1	697	24	10.634	8.8	391.1	2	-4,-6	-	-	20.868	ALTERNATIVE:1
ENSMUSG00000020333	Acsl6	ENSMUST00000108899	ENSMUSP00000104527	TRANSLATION	protein_coding	-	-	1	424	7	6.479	0	194.7	2	-4,-6	-	-	0	MINOR
ENSMUSG00000020333	Acsl6	ENSMUST00000149403	ENSMUSP00000120540	TRANSLATION	protein_coding	stop	-	5	139	0	1.215	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000017781	Pitpna	ENSMUST00000102509	ENSMUSP00000099567	TRANSLATION	nonsense_mediated_decay	-	-	5	99	0	2.66	0	165.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017781	Pitpna	ENSMUST00000143219	ENSMUSP00000115723	TRANSLATION	protein_coding	-	CCDS25052.1	1	271	0	7.41	19.5	403.2	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000017781	Pitpna	ENSMUST00000140841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017781	Pitpna	ENSMUST00000153768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017781	Pitpna	ENSMUST00000179445	ENSMUSP00000137601	TRANSLATION	protein_coding	-	-	5	271	0	7.41	19.5	399.6	0	-4,-5	-	-	15.784	ALTERNATIVE:1
ENSMUSG00000017781	Pitpna	ENSMUST00000179521	ENSMUSP00000137510	TRANSLATION	protein_coding	-	-	5	272	0	7.41	19.5	399.9	0	-4,-5	-	-	15.802	ALTERNATIVE:1
ENSMUSG00000020720	Psmd12	ENSMUST00000106750	ENSMUSP00000102361	TRANSLATION	protein_coding	-	-	5	436	0	9.75	1.2	82.2	0	-4,-5	-	-	10.548	MINOR
ENSMUSG00000020720	Psmd12	ENSMUST00000021063	ENSMUSP00000021063	TRANSLATION	protein_coding	-	CCDS25568.1	1	456	0	10.5	17.3	82.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020720	Psmd12	ENSMUST00000106752	ENSMUSP00000102363	TRANSLATION	protein_coding	-	-	1	418	0	9.5	0	51.2	0	-4,-5	-	-	7.74	MINOR
ENSMUSG00000020926	Adam11	ENSMUST00000103081	ENSMUSP00000099370	TRANSLATION	protein_coding	-	CCDS25503.1	1	773	17	13.7	2.7	491.4	1	3,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000020926	Adam11	ENSMUST00000143269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000135513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000142912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000068150	ENSMUSP00000069466	TRANSLATION	protein_coding	-	CCDS48946.1	1	778	17	13.7	2.7	491.4	1	3,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000020926	Adam11	ENSMUST00000141563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000124879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000134296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020926	Adam11	ENSMUST00000126024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004040	Stat3	ENSMUST00000137093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000092671	ENSMUSP00000090342	TRANSLATION	protein_coding	-	CCDS48934.1	1	769	0	18.16	10.8	629.6	0	-4,-5	-	-	14.34	ALTERNATIVE:1
ENSMUSG00000004040	Stat3	ENSMUST00000155972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000138438	ENSMUSP00000121677	TRANSLATION	protein_coding	-	-	5	744	0	17.41	0	597.1	0	-4,-5	-	-	7.89	MINOR
ENSMUSG00000004040	Stat3	ENSMUST00000137367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000130686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000154170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000156645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004040	Stat3	ENSMUST00000151544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000152623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000127638	ENSMUSP00000120152	TRANSLATION	protein_coding	-	CCDS25440.1	1	770	0	18.16	10.8	629.6	0	-4,-5	-	-	14.34	PRINCIPAL:4
ENSMUSG00000004040	Stat3	ENSMUST00000103114	ENSMUSP00000099403	TRANSLATION	protein_coding	-	CCDS25441.1	1	722	0	18.49	7.6	629.6	0	-4,-5	-	-	14.019	ALTERNATIVE:1
ENSMUSG00000004040	Stat3	ENSMUST00000146971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004040	Stat3	ENSMUST00000152601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095312	Olfr382	ENSMUST00000092921	ENSMUSP00000091575	TRANSLATION	protein_coding	-	CCDS25012.1	-	312	0	0.42	2.7	178.6	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078974	Sec61g	ENSMUST00000138695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078974	Sec61g	ENSMUST00000109642	ENSMUSP00000105270	TRANSLATION	protein_coding	-	CCDS48755.1	2	68	0	2	21.5	55.8	2	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000078974	Sec61g	ENSMUST00000178855	ENSMUSP00000137362	TRANSLATION	protein_coding	-	CCDS48755.1	1	68	0	2	21.5	55.8	2	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000078974	Sec61g	ENSMUST00000131439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078974	Sec61g	ENSMUST00000109643	ENSMUSP00000105271	TRANSLATION	protein_coding	-	CCDS48755.1	1	68	0	2	21.5	55.8	2	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000078974	Sec61g	ENSMUST00000166950	ENSMUSP00000132348	TRANSLATION	protein_coding	-	CCDS48756.1	1	100	0	2	0.5	55.8	2	-4,0	-	-	12	MINOR
ENSMUSG00000078974	Sec61g	ENSMUST00000109641	ENSMUSP00000105269	TRANSLATION	protein_coding	-	CCDS48755.1	2	68	0	2	21.5	55.8	2	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000034641	Cd300ld	ENSMUST00000045075	ENSMUSP00000047022	TRANSLATION	protein_coding	-	CCDS25615.1	1	221	0	1.4	0.5	66.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020917	Acly	ENSMUST00000007131	ENSMUSP00000007131	TRANSLATION	protein_coding	-	CCDS25425.1	1	1091	21	21.96	10.8	97.7	0	-4,-5	-	-	20.34	PRINCIPAL:3
ENSMUSG00000020917	Acly	ENSMUST00000107389	ENSMUSP00000103012	TRANSLATION	protein_coding	-	CCDS56807.1	1	1101	21	22.29	10.8	97.7	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020917	Acly	ENSMUST00000154151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020917	Acly	ENSMUST00000165111	ENSMUSP00000127632	TRANSLATION	protein_coding	-	CCDS25425.1	1	1091	21	21.96	10.8	97.7	0	-4,-5	-	-	20.34	PRINCIPAL:3
ENSMUSG00000020917	Acly	ENSMUST00000107385	ENSMUSP00000103008	TRANSLATION	protein_coding	-	-	1	491	19	11.58	0	0	0	-4,-5	-	-	4.668	MINOR
ENSMUSG00000020917	Acly	ENSMUST00000154888	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020917	Acly	ENSMUST00000152969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020393	Kremen1	ENSMUST00000151978	ENSMUSP00000121252	TRANSLATION	protein_coding	start	-	1	115	0	2.5	0	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020393	Kremen1	ENSMUST00000020662	ENSMUSP00000020662	TRANSLATION	protein_coding	-	CCDS24399.1	1	473	0	6.22	1.5	196.8	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000056008	Gm11541	ENSMUST00000069852	ENSMUSP00000066721	TRANSLATION	protein_coding	-	CCDS48889.1	1	108	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020704	Asic2	ENSMUST00000066197	ENSMUSP00000067095	TRANSLATION	protein_coding	-	CCDS36243.1	1	512	0	7.4	10.5	357.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020704	Asic2	ENSMUST00000021045	ENSMUSP00000021045	TRANSLATION	protein_coding	-	CCDS25137.1	1	563	0	6.88	7.5	336.8	0	-4,0	-	-	11.79	MINOR
ENSMUSG00000057594	Arl16	ENSMUST00000154136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000128824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000124970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000143233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000152641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000141654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000137639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000076921	ENSMUSP00000076188	TRANSLATION	protein_coding	-	CCDS36390.1	1	173	14	2.63	5.2	79.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000057594	Arl16	ENSMUST00000125806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000122973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057594	Arl16	ENSMUST00000150688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039084	Chad	ENSMUST00000040418	ENSMUSP00000047844	TRANSLATION	protein_coding	-	CCDS25260.1	1	358	0	3	1.5	191.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020435	Osbp2	ENSMUST00000155197	ENSMUSP00000116490	TRANSLATION	protein_coding	stop	-	2	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020435	Osbp2	ENSMUST00000101632	ENSMUSP00000099156	TRANSLATION	protein_coding	-	-	5	497	0	3.88	0.5	475.5	0	-4,-6	-	-	7.98	MINOR
ENSMUSG00000020435	Osbp2	ENSMUST00000102950	ENSMUSP00000100015	TRANSLATION	protein_coding	-	CCDS78912.1	1	455	0	3.88	0.5	475.5	0	-4,-5	-	-	7.98	MINOR
ENSMUSG00000020435	Osbp2	ENSMUST00000135250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020435	Osbp2	ENSMUST00000127371	ENSMUSP00000116361	TRANSLATION	protein_coding	stop	-	3	155	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020435	Osbp2	ENSMUST00000070552	ENSMUSP00000068652	TRANSLATION	protein_coding	-	CCDS24367.1	5	908	0	4.48	0.5	522.5	0	-3,0	-	-	12	PRINCIPAL:1
ENSMUSG00000075702	Selenom	ENSMUST00000131865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075702	Selenom	ENSMUST00000094469	ENSMUSP00000092041	TRANSLATION	protein_coding	-	CCDS24365.1	1	145	0	3.75	0.5	93.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000075702	Selenom	ENSMUST00000123677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017167	Cntnap1	ENSMUST00000138942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017167	Cntnap1	ENSMUST00000103109	ENSMUSP00000099398	TRANSLATION	protein_coding	-	CCDS25455.1	1	1385	0	8.7	5.1	365.5	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000045532	C1ql1	ENSMUST00000057849	ENSMUSP00000050469	TRANSLATION	protein_coding	-	CCDS25509.1	1	258	0	1.8	4.1	154.4	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000020703	5530401A14Rik	ENSMUST00000021044	ENSMUSP00000021044	TRANSLATION	protein_coding	-	-	1	131	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000020703	5530401A14Rik	ENSMUST00000126433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051510	Mafg	ENSMUST00000106181	ENSMUSP00000101787	TRANSLATION	protein_coding	-	CCDS25748.1	3	162	0	1	14.8	115.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051510	Mafg	ENSMUST00000106182	ENSMUSP00000101788	TRANSLATION	protein_coding	-	CCDS25748.1	2	162	0	1	14.8	115.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051510	Mafg	ENSMUST00000058162	ENSMUSP00000053899	TRANSLATION	protein_coding	-	CCDS25748.1	1	162	0	1	14.8	115.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051510	Mafg	ENSMUST00000106180	ENSMUSP00000101786	TRANSLATION	protein_coding	-	CCDS25748.1	2	162	0	1	14.8	115.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051510	Mafg	ENSMUST00000128498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002055	Spag5	ENSMUST00000125477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000045026	ENSMUSP00000045286	TRANSLATION	protein_coding	-	CCDS25098.1	1	1165	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000002055	Spag5	ENSMUST00000146068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000150016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000149711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000133579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000141026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002055	Spag5	ENSMUST00000128359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061111	Mcrip1	ENSMUST00000135515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061111	Mcrip1	ENSMUST00000034913	ENSMUSP00000034913	TRANSLATION	protein_coding	-	CCDS36391.1	1	97	0	0	15.7	80.9	0	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000043099	Hic1	ENSMUST00000055619	ENSMUSP00000053483	TRANSLATION	protein_coding	-	CCDS36226.1	1	893	20	0	0.5	167.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000043099	Hic1	ENSMUST00000131720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051355	Commd1	ENSMUST00000093270	ENSMUSP00000090958	TRANSLATION	protein_coding	start	-	3	140	0	2	0	145.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051355	Commd1	ENSMUST00000057843	ENSMUSP00000053606	TRANSLATION	protein_coding	-	-	1	243	0	1	0	116.6	0	-4,-6	-	-	3.39	MINOR
ENSMUSG00000051355	Commd1	ENSMUST00000162924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051355	Commd1	ENSMUST00000161944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051355	Commd1	ENSMUST00000159081	ENSMUSP00000124719	TRANSLATION	protein_coding	-	CCDS24472.1	1	188	0	2.75	9.7	196.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000051355	Commd1	ENSMUST00000071068	ENSMUSP00000065079	TRANSLATION	protein_coding	start	-	2	93	0	1.75	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044542	Prop1	ENSMUST00000159179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044542	Prop1	ENSMUST00000051159	ENSMUSP00000057231	TRANSLATION	protein_coding	-	CCDS24643.1	1	223	0	1.2	2.7	79.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044542	Prop1	ENSMUST00000162420	ENSMUSP00000125413	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023170	Gps2	ENSMUST00000072581	ENSMUSP00000072389	TRANSLATION	protein_coding	-	CCDS24922.1	5	327	0	2	8.8	300.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000023170	Gps2	ENSMUST00000124596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023170	Gps2	ENSMUST00000134581	ENSMUSP00000136921	TRANSLATION	protein_coding	start	-	3	90	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023170	Gps2	ENSMUST00000057884	ENSMUSP00000054072	TRANSLATION	protein_coding	-	CCDS24922.1	1	327	0	2	8.8	300.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000023170	Gps2	ENSMUST00000116358	ENSMUSP00000112062	TRANSLATION	protein_coding	-	CCDS24922.1	1	327	0	2	8.8	300.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000044066	Cep68	ENSMUST00000050611	ENSMUSP00000054943	TRANSLATION	protein_coding	-	CCDS24456.1	1	733	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000044066	Cep68	ENSMUST00000161218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044066	Cep68	ENSMUST00000109596	ENSMUSP00000105225	TRANSLATION	protein_coding	-	-	1	660	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000044066	Cep68	ENSMUST00000162811	ENSMUSP00000125113	TRANSLATION	protein_coding	-	-	1	633	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046442	Ppm1e	ENSMUST00000055438	ENSMUSP00000061278	TRANSLATION	protein_coding	-	CCDS25211.1	1	749	12	2.72	0.5	218.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046442	Ppm1e	ENSMUST00000155154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015542	Nat9	ENSMUST00000153796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015542	Nat9	ENSMUST00000103038	ENSMUSP00000099327	TRANSLATION	protein_coding	-	CCDS25622.1	1	241	22	1.55	1.5	32.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015542	Nat9	ENSMUST00000134769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015542	Nat9	ENSMUST00000103039	ENSMUSP00000099328	TRANSLATION	protein_coding	-	CCDS25622.1	5	241	22	1.55	1.5	32.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015542	Nat9	ENSMUST00000134399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015542	Nat9	ENSMUST00000103041	ENSMUSP00000099330	TRANSLATION	protein_coding	-	CCDS25622.1	5	241	22	1.55	1.5	32.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015542	Nat9	ENSMUST00000137843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015542	Nat9	ENSMUST00000103040	ENSMUSP00000099329	TRANSLATION	protein_coding	-	CCDS25622.1	1	241	22	1.55	1.5	32.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015542	Nat9	ENSMUST00000127419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038807	Rap1gap2	ENSMUST00000208896	ENSMUSP00000146728	TRANSLATION	protein_coding	stop	-	3	173	2	0.8	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038807	Rap1gap2	ENSMUST00000102521	ENSMUSP00000099580	TRANSLATION	protein_coding	-	CCDS25032.1	5	712	2	8.9	10.3	216.9	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000038807	Rap1gap2	ENSMUST00000047488	ENSMUSP00000040180	TRANSLATION	nonsense_mediated_decay	-	-	1	758	2	8.9	0	216.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038807	Rap1gap2	ENSMUST00000123440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038807	Rap1gap2	ENSMUST00000238457	ENSMUSP00000158689	TRANSLATION	protein_coding	-	-	-	772	2	8.9	4.1	216.9	0	-4,-1	-	-	14.999	MINOR
ENSMUSG00000038807	Rap1gap2	ENSMUST00000145524	ENSMUSP00000117290	TRANSLATION	protein_coding	stop	-	5	90	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078668	Gm11595	ENSMUST00000107440	ENSMUSP00000103064	TRANSLATION	protein_coding	-	CCDS48915.1	-	289	0	0	0.5	170.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000070331	Qrich2	ENSMUST00000093909	ENSMUSP00000091437	TRANSLATION	protein_coding	-	CCDS25667.1	1	592	0	0	0.5	227	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000070331	Qrich2	ENSMUST00000134182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070331	Qrich2	ENSMUST00000208602	ENSMUSP00000147009	TRANSLATION	protein_coding	-	-	5	2337	0	0	0.5	227	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000070331	Qrich2	ENSMUST00000140697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048728	Zfp454	ENSMUST00000050595	ENSMUSP00000061824	TRANSLATION	protein_coding	-	CCDS24639.1	1	536	48	1.6	0.5	344.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000048728	Zfp454	ENSMUST00000163301	ENSMUSP00000129125	TRANSLATION	protein_coding	-	CCDS24639.1	3	536	48	1.6	0.5	344.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000048728	Zfp454	ENSMUST00000109131	ENSMUSP00000104759	TRANSLATION	protein_coding	-	-	1	425	48	0.6	0	258.9	0	-4,-5	-	-	9.114	MINOR
ENSMUSG00000048728	Zfp454	ENSMUST00000126718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048728	Zfp454	ENSMUST00000136599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048728	Zfp454	ENSMUST00000125749	ENSMUSP00000122658	TRANSLATION	protein_coding	stop	-	5	122	0	1	0	85.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004018	Fancl	ENSMUST00000136830	ENSMUSP00000117073	TRANSLATION	protein_coding	stop	-	3	123	0	1.1	0	61.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004018	Fancl	ENSMUST00000109509	ENSMUSP00000105135	TRANSLATION	protein_coding	-	CCDS70152.1	1	370	11	7.68	0.5	434.9	0	-4,-5	-	-	16.524	MINOR
ENSMUSG00000004018	Fancl	ENSMUST00000004120	ENSMUSP00000004120	TRANSLATION	protein_coding	-	CCDS24485.1	1	375	11	7.68	2.7	459.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004018	Fancl	ENSMUST00000143471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004018	Fancl	ENSMUST00000134445	ENSMUSP00000119873	TRANSLATION	protein_coding	start	-	3	145	6	3	0	131	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009185	Ccl8	ENSMUST00000009329	ENSMUSP00000009329	TRANSLATION	protein_coding	-	CCDS36248.1	1	97	0	2	2.9	70.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000070336	Fbxo47	ENSMUST00000125403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000070336	Fbxo47	ENSMUST00000093939	ENSMUSP00000091471	TRANSLATION	protein_coding	-	CCDS36299.1	1	451	0	0	3.9	23.7	0	-4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000057135	Scimp	ENSMUST00000108534	ENSMUSP00000104174	TRANSLATION	protein_coding	-	CCDS24967.1	1	150	0	0	1.5	223.2	2	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057135	Scimp	ENSMUST00000074572	ENSMUSP00000074157	TRANSLATION	protein_coding	-	-	1	81	0	0	0	71.4	2	-1,-5	-	-	0	MINOR
ENSMUSG00000020778	Ten1	ENSMUST00000021130	ENSMUSP00000021130	TRANSLATION	protein_coding	-	CCDS48982.1	1	161	0	2.6	0.5	137.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020778	Ten1	ENSMUST00000124663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020778	Ten1	ENSMUST00000146066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020778	Ten1	ENSMUST00000135460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033909	Usp36	ENSMUST00000106296	ENSMUSP00000101903	TRANSLATION	protein_coding	-	CCDS48998.1	5	1098	8	6.049	0.5	164.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033909	Usp36	ENSMUST00000151433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033909	Usp36	ENSMUST00000141647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033909	Usp36	ENSMUST00000092382	ENSMUSP00000090036	TRANSLATION	protein_coding	-	CCDS48998.1	5	1098	8	6.049	0.5	164.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033909	Usp36	ENSMUST00000144153	ENSMUSP00000122761	TRANSLATION	protein_coding	stop	-	5	890	4	5.185	0	119.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033909	Usp36	ENSMUST00000148998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033953	Ppp3r1	ENSMUST00000102880	ENSMUSP00000099944	TRANSLATION	protein_coding	-	CCDS24448.1	1	170	25	3.75	19	88.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033953	Ppp3r1	ENSMUST00000154425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040405	Havcr1	ENSMUST00000081819	ENSMUSP00000080503	TRANSLATION	protein_coding	-	CCDS48778.1	1	282	4	1	0.5	58.7	2	3,-2	-	-	15.82	ALTERNATIVE:2
ENSMUSG00000040405	Havcr1	ENSMUST00000047568	ENSMUSP00000043827	TRANSLATION	protein_coding	-	CCDS24583.1	1	305	4	1	0.5	58.7	2	3,-2	-	-	15.82	PRINCIPAL:3
ENSMUSG00000040405	Havcr1	ENSMUST00000109224	ENSMUSP00000104847	TRANSLATION	protein_coding	stop	-	3	168	4	1	0	60.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000040405	Havcr1	ENSMUST00000109223	ENSMUSP00000104846	TRANSLATION	protein_coding	-	CCDS48778.1	1	282	4	1	0.5	58.7	2	3,-2	-	-	15.82	ALTERNATIVE:2
ENSMUSG00000040483	Xaf1	ENSMUST00000094041	ENSMUSP00000091583	TRANSLATION	nonsense_mediated_decay	-	-	1	75	7	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040483	Xaf1	ENSMUST00000146233	ENSMUSP00000123011	TRANSLATION	protein_coding	-	CCDS24984.2	5	273	19	0.9	0.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040483	Xaf1	ENSMUST00000151440	ENSMUSP00000121483	TRANSLATION	protein_coding	stop	-	3	207	7	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040483	Xaf1	ENSMUST00000140842	ENSMUSP00000121472	TRANSLATION	protein_coding	-	CCDS70236.1	3	178	7	0.9	0.5	0	0	-4,-6	-	-	6	MINOR
ENSMUSG00000040483	Xaf1	ENSMUST00000142921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016559	H3f3b	ENSMUST00000139378	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016559	H3f3b	ENSMUST00000139623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016559	H3f3b	ENSMUST00000016703	ENSMUSP00000016703	TRANSLATION	protein_coding	-	CCDS36377.1	1	136	0	3	21.5	181.4	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000016559	H3f3b	ENSMUST00000106454	ENSMUSP00000102062	TRANSLATION	protein_coding	-	CCDS36377.1	5	136	0	3	21.5	181.4	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000025127	Gcgr	ENSMUST00000147877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025127	Gcgr	ENSMUST00000026119	ENSMUSP00000026119	TRANSLATION	protein_coding	-	CCDS25739.1	1	485	0	10.4	1.5	323.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025127	Gcgr	ENSMUST00000128827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025127	Gcgr	ENSMUST00000143063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038351	Sgsm2	ENSMUST00000081799	ENSMUSP00000080489	TRANSLATION	protein_coding	-	-	5	1050	0	7.04	5.1	222.9	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000038351	Sgsm2	ENSMUST00000156287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038351	Sgsm2	ENSMUST00000148421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038351	Sgsm2	ENSMUST00000057631	ENSMUSP00000050496	TRANSLATION	protein_coding	-	CCDS36224.1	1	1005	0	7.04	5.1	222.9	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000038351	Sgsm2	ENSMUST00000123573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020376	Rnf130	ENSMUST00000102776	ENSMUSP00000099837	TRANSLATION	protein_coding	-	CCDS24626.1	1	419	8	3.63	5.1	76.7	2	3,-3	-	-	20	PRINCIPAL:3
ENSMUSG00000020376	Rnf130	ENSMUST00000054684	ENSMUSP00000056345	TRANSLATION	protein_coding	-	CCDS78937.1	1	384	8	3.63	4.1	76.7	2	3,-3	-	-	19.512	ALTERNATIVE:2
ENSMUSG00000020376	Rnf130	ENSMUST00000143607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020376	Rnf130	ENSMUST00000238748	ENSMUSP00000158797	TRANSLATION	protein_coding	-	-	-	419	8	3.63	2.9	76.7	2	3,-3	-	-	18.926	ALTERNATIVE:2
ENSMUSG00000020864	Ankrd40	ENSMUST00000107818	ENSMUSP00000103448	TRANSLATION	protein_coding	-	CCDS25253.2	5	363	0	2.64	1.5	40.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000020864	Ankrd40	ENSMUST00000124087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020864	Ankrd40	ENSMUST00000149867	ENSMUSP00000120419	TRANSLATION	protein_coding	stop	-	2	68	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020864	Ankrd40	ENSMUST00000051221	ENSMUSP00000061637	TRANSLATION	protein_coding	-	-	1	322	0	2.64	0	40.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020864	Ankrd40	ENSMUST00000021227	ENSMUSP00000021227	TRANSLATION	protein_coding	-	CCDS36283.1	1	324	0	2.64	0.5	40.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020492	Ska2	ENSMUST00000131202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020492	Ska2	ENSMUST00000142263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020492	Ska2	ENSMUST00000020794	ENSMUSP00000020794	TRANSLATION	protein_coding	-	CCDS25209.1	1	120	0	2.83	6.5	121.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000078153	Psme2b	ENSMUST00000104958	ENSMUSP00000100564	TRANSLATION	protein_coding	-	CCDS78934.1	-	239	0	0.8	8.8	264.7	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037601	Nme1	ENSMUST00000107844	ENSMUSP00000103475	TRANSLATION	protein_coding	-	-	3	117	7	2.35	0	97.3	0	-4,-5	-	-	5.07	MINOR
ENSMUSG00000037601	Nme1	ENSMUST00000135884	ENSMUSP00000117022	TRANSLATION	protein_coding	-	CCDS25247.1	1	152	12	4.5	19.5	185.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037601	Nme1	ENSMUST00000021220	ENSMUSP00000021220	TRANSLATION	protein_coding	stop	-	1	127	12	3.75	0	167	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018666	Cbx1	ENSMUST00000079702	ENSMUSP00000078640	TRANSLATION	protein_coding	-	-	1	150	1	3	0	102.2	0	-4,-5	-	-	5.796	MINOR
ENSMUSG00000018666	Cbx1	ENSMUST00000134585	ENSMUSP00000137834	TRANSLATION	nonsense_mediated_decay	-	-	1	138	1	3	2.5	97.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018666	Cbx1	ENSMUST00000093943	ENSMUSP00000091475	TRANSLATION	protein_coding	-	CCDS25303.1	1	185	1	4	11.7	172.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018666	Cbx1	ENSMUST00000018810	ENSMUSP00000018810	TRANSLATION	protein_coding	-	-	1	138	1	3	2.5	97.8	0	-4,-5	-	-	5.952	MINOR
ENSMUSG00000018666	Cbx1	ENSMUST00000141257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019505	Ubb	ENSMUST00000019649	ENSMUSP00000019649	TRANSLATION	protein_coding	-	CCDS24826.1	1	305	0	2	6.9	463.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019505	Ubb	ENSMUST00000136938	ENSMUSP00000117361	TRANSLATION	protein_coding	stop	-	2	236	0	1	0	348.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020520	Galnt10	ENSMUST00000108846	ENSMUSP00000104474	TRANSLATION	protein_coding	-	-	1	134	0	2.6	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000020520	Galnt10	ENSMUST00000066987	ENSMUSP00000065096	TRANSLATION	protein_coding	-	CCDS24719.1	1	603	21	11.6	7.5	218.5	0	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000020305	Asb3	ENSMUST00000137306	ENSMUSP00000114692	TRANSLATION	nonsense_mediated_decay	-	-	5	124	0	1	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020305	Asb3	ENSMUST00000020551	ENSMUSP00000020551	TRANSLATION	protein_coding	-	CCDS24511.1	1	525	0	6	2.7	238.3	0	-4,-5	-	-	11.16	PRINCIPAL:2
ENSMUSG00000020305	Asb3	ENSMUST00000117883	ENSMUSP00000113072	TRANSLATION	protein_coding	-	-	1	463	0	6	0	192.6	0	-4,-5	-	-	8.418	MINOR
ENSMUSG00000020305	Asb3	ENSMUST00000148163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020305	Asb3	ENSMUST00000148808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020305	Asb3	ENSMUST00000203878	ENSMUSP00000144900	TRANSLATION	protein_coding	-	-	5	564	0	6.42	0	238.3	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000001323	Srr	ENSMUST00000123855	ENSMUSP00000118485	TRANSLATION	protein_coding	stop	-	5	166	7	4	0	126.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001323	Srr	ENSMUST00000147817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001323	Srr	ENSMUST00000121738	ENSMUSP00000113372	TRANSLATION	protein_coding	-	CCDS25038.1	1	339	23	7.16	2.9	247.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001323	Srr	ENSMUST00000135587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001323	Srr	ENSMUST00000128556	ENSMUSP00000120012	TRANSLATION	protein_coding	stop	-	5	182	7	4.66	0	141.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001323	Srr	ENSMUST00000127499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001323	Srr	ENSMUST00000138612	ENSMUSP00000119256	TRANSLATION	protein_coding	stop	-	2	113	6	2.5	0	85	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001323	Srr	ENSMUST00000108448	ENSMUSP00000104087	TRANSLATION	protein_coding	-	CCDS25038.1	5	339	23	7.16	2.9	247.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001323	Srr	ENSMUST00000065211	ENSMUSP00000067552	TRANSLATION	protein_coding	-	CCDS25038.1	1	339	23	7.16	2.9	247.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001323	Srr	ENSMUST00000108447	ENSMUSP00000104086	TRANSLATION	protein_coding	-	-	5	314	16	6.33	0	197.2	0	-4,-5	-	-	8.658	MINOR
ENSMUSG00000035849	Krt222	ENSMUST00000103132	ENSMUSP00000099421	TRANSLATION	protein_coding	-	CCDS25375.1	1	294	0	1.666	7.5	106.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035849	Krt222	ENSMUST00000038214	ENSMUSP00000044561	TRANSLATION	protein_coding	-	-	1	254	0	1.6	5.1	89	0	-4,-5	-	-	12.585	MINOR
ENSMUSG00000035849	Krt222	ENSMUST00000154622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047205	Dusp18	ENSMUST00000055931	ENSMUSP00000057346	TRANSLATION	protein_coding	-	CCDS24369.1	1	188	8	1	6.5	111.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000047205	Dusp18	ENSMUST00000109996	ENSMUSP00000105624	TRANSLATION	protein_coding	-	CCDS24369.1	5	188	8	1	6.5	111.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000085486	Gm11634	ENSMUST00000154147	ENSMUSP00000147360	TRANSLATION	protein_coding	-	-	3	149	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000085486	Gm11634	ENSMUST00000209862	ENSMUSP00000148108	TRANSLATION	protein_coding	-	-	5	172	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:5
ENSMUSG00000017376	Nlk	ENSMUST00000165271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017376	Nlk	ENSMUST00000165475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017376	Nlk	ENSMUST00000170394	ENSMUSP00000130555	TRANSLATION	protein_coding	start	-	3	105	0	0.06	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017376	Nlk	ENSMUST00000142739	ENSMUSP00000119345	TRANSLATION	protein_coding	-	CCDS25113.2	1	527	19	5.945	14.8	214.3	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000020286	1700093K21Rik	ENSMUST00000239488	ENSMUSP00000159376	TRANSLATION	protein_coding	-	CCDS24477.1	-	196	0	0	0.5	214.4	3	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000020286	1700093K21Rik	ENSMUST00000156629	ENSMUSP00000122399	TRANSLATION	protein_coding	stop	-	5	19	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000020286	1700093K21Rik	ENSMUST00000140122	ENSMUSP00000123063	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000020286	1700093K21Rik	ENSMUST00000169264	ENSMUSP00000131204	TRANSLATION	protein_coding	-	CCDS24477.1	5	196	0	0	0.5	214.4	3	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000020286	1700093K21Rik	ENSMUST00000020527	ENSMUSP00000020527	TRANSLATION	protein_coding	-	-	1	178	0	0	0	214.4	3	0,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000081769	Gm12216	ENSMUST00000220191	ENSMUSP00000151907	TRANSLATION	protein_coding	-	-	5	62	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000081769	Gm12216	ENSMUST00000153206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081769	Gm12216	ENSMUST00000120776	ENSMUSP00000113458	TRANSLATION	protein_coding	-	-	2	33	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000081769	Gm12216	ENSMUST00000117316	ENSMUSP00000113077	TRANSLATION	protein_coding	-	-	1	32	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000081769	Gm12216	ENSMUST00000121435	ENSMUSP00000113293	TRANSLATION	protein_coding	-	-	5	47	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000081769	Gm12216	ENSMUST00000126535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081769	Gm12216	ENSMUST00000135815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055609	Hba-x	ENSMUST00000145569	ENSMUSP00000118167	TRANSLATION	protein_coding	start	-	3	156	20	2.28	0	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055609	Hba-x	ENSMUST00000020531	ENSMUSP00000020531	TRANSLATION	protein_coding	-	CCDS24522.1	1	142	20	3	8.8	91.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041623	D11Wsu47e	ENSMUST00000153732	ENSMUSP00000116817	TRANSLATION	protein_coding	stop	-	2	116	5	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041623	D11Wsu47e	ENSMUST00000123466	ENSMUSP00000117685	TRANSLATION	protein_coding	stop	-	3	144	5	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041623	D11Wsu47e	ENSMUST00000106621	ENSMUSP00000102232	TRANSLATION	protein_coding	-	CCDS48976.1	1	558	5	0	0.5	0	1	-4,-6	-	-	5	PRINCIPAL:1
ENSMUSG00000041623	D11Wsu47e	ENSMUST00000042227	ENSMUSP00000042025	TRANSLATION	protein_coding	-	CCDS48976.1	1	558	5	0	0.5	0	1	-4,-6	-	-	5	PRINCIPAL:1
ENSMUSG00000020875	Hoxb9	ENSMUST00000174042	ENSMUSP00000133919	TRANSLATION	protein_coding	-	-	1	136	0	0	0	136.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020875	Hoxb9	ENSMUST00000000010	ENSMUSP00000000010	TRANSLATION	protein_coding	-	CCDS25292.1	1	250	0	2	9.6	265	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020878	Lrrc46	ENSMUST00000021251	ENSMUSP00000021251	TRANSLATION	protein_coding	-	CCDS25311.1	1	323	0	3.7	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059552	Trp53	ENSMUST00000147512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059552	Trp53	ENSMUST00000108657	ENSMUSP00000104297	TRANSLATION	protein_coding	-	-	1	378	4	5.95	0.5	461.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000059552	Trp53	ENSMUST00000108658	ENSMUSP00000104298	TRANSLATION	protein_coding	-	CCDS36193.1	1	390	4	5.95	0.5	461.1	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000059552	Trp53	ENSMUST00000130540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059552	Trp53	ENSMUST00000005371	ENSMUSP00000005371	TRANSLATION	protein_coding	-	-	1	387	4	5.95	0.5	461.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000059552	Trp53	ENSMUST00000171247	ENSMUSP00000127130	TRANSLATION	protein_coding	-	CCDS48826.1	1	381	4	5.95	0.5	461.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000040610	Tlx3	ENSMUST00000037746	ENSMUSP00000047457	TRANSLATION	protein_coding	-	CCDS24533.1	1	291	0	1.6	6.6	72.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000002052	Supt6	ENSMUST00000002121	ENSMUSP00000002121	TRANSLATION	protein_coding	-	CCDS25095.1	1	1726	0	10.195	8.8	992.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002052	Supt6	ENSMUST00000108314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069855	Slc47a2	ENSMUST00000093029	ENSMUSP00000090710	TRANSLATION	protein_coding	-	CCDS24810.1	1	573	0	6.59	1.5	0	13	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069855	Slc47a2	ENSMUST00000134423	ENSMUSP00000120907	TRANSLATION	protein_coding	stop	-	5	477	0	6.59	0	0	13	-4,-6	-	-	-1	MINOR
ENSMUSG00000069855	Slc47a2	ENSMUST00000147450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020191	Spata48	ENSMUST00000020410	ENSMUSP00000020410	TRANSLATION	protein_coding	-	-	5	445	0	0	1.5	215.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000020191	Spata48	ENSMUST00000170661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020191	Spata48	ENSMUST00000109678	ENSMUSP00000105300	TRANSLATION	protein_coding	-	CCDS48752.1	1	149	0	0	1.5	215.8	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000025141	Myadml2	ENSMUST00000026134	ENSMUSP00000026134	TRANSLATION	protein_coding	-	CCDS56828.1	1	153	0	0	0.5	38.4	2	-4,-7	-	-	2.616	MINOR
ENSMUSG00000025141	Myadml2	ENSMUST00000145047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025141	Myadml2	ENSMUST00000239158	ENSMUSP00000158986	TRANSLATION	protein_coding	-	-	-	307	0	0	7.6	88.1	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000039198	Ptchd3	ENSMUST00000125199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039198	Ptchd3	ENSMUST00000036690	ENSMUSP00000035709	TRANSLATION	protein_coding	-	CCDS49014.1	1	906	0	1.58	0.5	571.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046634	Pkd1l1	ENSMUST00000155886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046634	Pkd1l1	ENSMUST00000178195	ENSMUSP00000136518	TRANSLATION	protein_coding	start	-	5	2070	0	2.475	0	259.4	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000046634	Pkd1l1	ENSMUST00000154153	ENSMUSP00000120803	TRANSLATION	protein_coding	start	-	5	2521	0	2.475	0	330	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000061878	Sphk1	ENSMUST00000150658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061878	Sphk1	ENSMUST00000106387	ENSMUSP00000101995	TRANSLATION	protein_coding	-	CCDS25668.1	5	382	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000063446	ENSMUSP00000067865	TRANSLATION	protein_coding	-	CCDS25668.1	2	382	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000100201	ENSMUSP00000097775	TRANSLATION	protein_coding	-	CCDS48986.1	1	381	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000063396	ENSMUSP00000064743	TRANSLATION	protein_coding	-	CCDS25668.1	2	382	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000106388	ENSMUSP00000101996	TRANSLATION	protein_coding	-	CCDS25668.1	5	382	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000106386	ENSMUSP00000101994	TRANSLATION	protein_coding	-	CCDS25668.1	1	382	10	6.08	1.5	92.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000061878	Sphk1	ENSMUST00000124682	ENSMUSP00000116055	TRANSLATION	protein_coding	stop	-	3	153	10	4.08	0	92.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061878	Sphk1	ENSMUST00000154034	ENSMUSP00000121219	TRANSLATION	protein_coding	stop	-	2	251	10	5.08	0	92.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061878	Sphk1	ENSMUST00000155102	ENSMUSP00000114819	TRANSLATION	protein_coding	stop	-	3	116	10	3	0	86.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061878	Sphk1	ENSMUST00000136526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061878	Sphk1	ENSMUST00000138840	ENSMUSP00000121064	TRANSLATION	protein_coding	stop	-	3	153	10	4.08	0	92.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061878	Sphk1	ENSMUST00000239437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061878	Sphk1	ENSMUST00000134834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061878	Sphk1	ENSMUST00000145737	ENSMUSP00000114622	TRANSLATION	protein_coding	stop	-	5	157	10	4.08	0	92.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061878	Sphk1	ENSMUST00000141798	ENSMUSP00000131010	TRANSLATION	protein_coding	-	CCDS25669.1	1	388	10	6.08	0.5	92.6	0	0,-4	-	-	18	PRINCIPAL:4
ENSMUSG00000061878	Sphk1	ENSMUST00000148185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040712	Camta2	ENSMUST00000120261	ENSMUSP00000113667	TRANSLATION	protein_coding	-	-	5	1179	0	2.86	2.9	114.8	0	-4,-5	-	-	8.875	MINOR
ENSMUSG00000040712	Camta2	ENSMUST00000145823	ENSMUSP00000123602	TRANSLATION	nonsense_mediated_decay	-	-	1	181	0	0	0	86.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040712	Camta2	ENSMUST00000100933	ENSMUSP00000098493	TRANSLATION	protein_coding	-	-	5	1198	0	2.86	1.2	177.8	0	-4,-6	-	-	12.069	ALTERNATIVE:2
ENSMUSG00000040712	Camta2	ENSMUST00000036299	ENSMUSP00000043792	TRANSLATION	protein_coding	-	CCDS24963.1	1	1208	0	2.86	3.9	168.9	0	-4,-5	-	-	12.466	PRINCIPAL:3
ENSMUSG00000040712	Camta2	ENSMUST00000150224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040712	Camta2	ENSMUST00000119120	ENSMUSP00000113847	TRANSLATION	protein_coding	-	CCDS56787.1	1	1196	0	2.86	1.5	177.8	0	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000040712	Camta2	ENSMUST00000125687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040712	Camta2	ENSMUST00000108544	ENSMUSP00000104184	TRANSLATION	protein_coding	-	CCDS56788.1	1	1203	0	2.86	3.9	177.8	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000040712	Camta2	ENSMUST00000108545	ENSMUSP00000104185	TRANSLATION	protein_coding	-	CCDS56786.1	1	1172	0	2.86	0.5	114.8	0	-4,-5	-	-	8.22	MINOR
ENSMUSG00000094845	Tmem95	ENSMUST00000178597	ENSMUSP00000137492	TRANSLATION	protein_coding	-	CCDS56783.1	5	176	0	0	1.7	264.6	0	3,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000094694	Ighv1-9	ENSMUST00000103498	ENSMUSP00000100279	TRANSLATION	IG_V_gene	stop	-	-	116	8	1.5	0	52.7	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094694	Ighv1-9	ENSMUST00000193893	ENSMUSP00000141381	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	52.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000173614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000173688	ENSMUSP00000133557	TRANSLATION	protein_coding	start	-	3	84	0	1.75	0	144.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000232072	ENSMUSP00000156312	TRANSLATION	protein_coding	-	CCDS25833.1	-	200	0	3.98	14.8	414.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000172834	ENSMUSP00000134508	TRANSLATION	protein_coding	-	-	1	188	0	3.23	0	371.2	0	-4,-2	-	-	7.902	MINOR
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000076260	ENSMUSP00000075609	TRANSLATION	protein_coding	-	CCDS25833.1	1	200	0	3.98	14.8	414.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000062352	Itgb1bp1	ENSMUST00000173729	ENSMUSP00000134627	TRANSLATION	protein_coding	-	CCDS25833.1	1	200	0	3.98	14.8	414.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000095444	Ighd2-4	ENSMUST00000179560	ENSMUSP00000141415	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076612	Ighg2c	ENSMUST00000103416	ENSMUSP00000100212	TRANSLATION	IG_C_gene	start	-	-	404	5	4.45	0	215.5	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000076612	Ighg2c	ENSMUST00000195192	ENSMUSP00000142282	TRANSLATION	IG_C_gene	start	-	-	335	5	3.45	0	215.5	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037957	Wdr20	ENSMUST00000191983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037957	Wdr20	ENSMUST00000193053	ENSMUSP00000141678	TRANSLATION	protein_coding	-	CCDS84002.1	1	161	0	2.75	6.4	0	0	-4,-5	-	-	6.002	MINOR
ENSMUSG00000037957	Wdr20	ENSMUST00000095410	ENSMUSP00000093059	TRANSLATION	protein_coding	-	CCDS26173.1	1	569	0	3.75	2.9	37.3	0	-4,-5	-	-	12.704	PRINCIPAL:1
ENSMUSG00000037957	Wdr20	ENSMUST00000195886	ENSMUSP00000142157	TRANSLATION	protein_coding	start	-	3	122	0	1.948	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037957	Wdr20	ENSMUST00000194118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037957	Wdr20	ENSMUST00000192870	ENSMUSP00000141887	TRANSLATION	nonsense_mediated_decay	-	-	3	146	0	2.75	1.2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037957	Wdr20	ENSMUST00000191611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002679	Med6	ENSMUST00000161598	ENSMUSP00000124361	TRANSLATION	protein_coding	-	CCDS83982.1	5	181	0	3.048	2.9	148.8	0	-4,-5	-	-	12.476	MINOR
ENSMUSG00000002679	Med6	ENSMUST00000159187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002679	Med6	ENSMUST00000161902	ENSMUSP00000125103	TRANSLATION	protein_coding	stop	-	3	132	0	2.348	0	98.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002679	Med6	ENSMUST00000161211	ENSMUSP00000125156	TRANSLATION	protein_coding	-	CCDS83983.1	1	246	0	3.048	17	148.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000002679	Med6	ENSMUST00000160739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002679	Med6	ENSMUST00000002756	ENSMUSP00000002756	TRANSLATION	protein_coding	-	CCDS26023.1	1	195	0	2.348	0.5	98.3	0	-4,-6	-	-	7.572	MINOR
ENSMUSG00000002997	Prkar2b	ENSMUST00000146865	ENSMUSP00000135290	TRANSLATION	protein_coding	-	-	1	256	28	6.5	1.2	126.2	0	-4,-5	-	-	8.968	MINOR
ENSMUSG00000002997	Prkar2b	ENSMUST00000036497	ENSMUSP00000039797	TRANSLATION	protein_coding	-	CCDS25869.1	1	416	28	9.25	6.3	186.3	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000002997	Prkar2b	ENSMUST00000003079	ENSMUSP00000003079	TRANSLATION	protein_coding	-	CCDS25869.1	1	416	28	9.25	6.3	186.3	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000109482	Gm4756	ENSMUST00000209092	ENSMUSP00000146711	TRANSLATION	nonsense_mediated_decay	-	-	5	47	11	0.42	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000109482	Gm4756	ENSMUST00000207585	ENSMUSP00000146963	TRANSLATION	protein_coding	-	-	5	171	26	2.52	0	95.3	0	1,-4	-	-	4.122	MINOR
ENSMUSG00000109482	Gm4756	ENSMUST00000208307	ENSMUSP00000147204	TRANSLATION	protein_coding	-	-	3	226	19	2.74	0	122.1	0	-4,-6	-	-	6.174	MINOR
ENSMUSG00000109482	Gm4756	ENSMUST00000208039	ENSMUSP00000146943	TRANSLATION	protein_coding	-	-	5	335	39	4.46	0	161.9	0	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000109482	Gm4756	ENSMUST00000222413	ENSMUSP00000152376	TRANSLATION	protein_coding	start	-	5	242	37	3.46	0	134.9	0	0,-4	-	-	-1	MINOR
ENSMUSG00000109482	Gm4756	ENSMUST00000209038	ENSMUSP00000147067	TRANSLATION	protein_coding	-	-	5	209	33	2.7	0	95.3	0	1,-4	-	-	6.48	MINOR
ENSMUSG00000109482	Gm4756	ENSMUST00000209162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051726	Kcnf1	ENSMUST00000170580	ENSMUSP00000131480	TRANSLATION	protein_coding	-	CCDS25825.2	-	505	0	0.48	1.5	229.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021244	Ylpm1	ENSMUST00000168977	ENSMUSP00000128962	TRANSLATION	protein_coding	-	-	5	1433	8	0	0.5	36	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021244	Ylpm1	ENSMUST00000164558	ENSMUSP00000126347	TRANSLATION	nonsense_mediated_decay	start	-	5	1577	8	0	0	36	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021244	Ylpm1	ENSMUST00000021670	ENSMUSP00000021670	TRANSLATION	protein_coding	-	CCDS49114.1	5	2139	8	0	0.5	36	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021244	Ylpm1	ENSMUST00000101202	ENSMUSP00000098763	TRANSLATION	protein_coding	-	-	5	1386	8	0	0	36	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021244	Ylpm1	ENSMUST00000166605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021244	Ylpm1	ENSMUST00000165803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021244	Ylpm1	ENSMUST00000167838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021244	Ylpm1	ENSMUST00000169150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095429	Ighv5-12	ENSMUST00000103450	ENSMUSP00000100231	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	57.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000079055	Slc8a3	ENSMUST00000183102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079055	Slc8a3	ENSMUST00000182208	ENSMUSP00000138735	TRANSLATION	protein_coding	-	CCDS36485.1	1	928	16	4.492	7.8	597.9	10	2,-3	-	-	18.648	MINOR
ENSMUSG00000079055	Slc8a3	ENSMUST00000064594	ENSMUSP00000063258	TRANSLATION	protein_coding	-	-	5	927	18	4.572	8.8	605.8	10	2,-3	-	-	21	ALTERNATIVE:1
ENSMUSG00000079055	Slc8a3	ENSMUST00000182366	ENSMUSP00000138803	TRANSLATION	protein_coding	stop	-	3	122	1	2.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079055	Slc8a3	ENSMUST00000085238	ENSMUSP00000082334	TRANSLATION	protein_coding	-	CCDS49103.1	1	921	18	4.44	8.8	605.8	10	2,-3	-	-	20.736	PRINCIPAL:2
ENSMUSG00000051804	Adam6b	ENSMUST00000063317	ENSMUSP00000065529	TRANSLATION	protein_coding	-	CCDS26207.1	-	756	10	0.32	0.5	266.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000094057	Ighd2-7	ENSMUST00000177965	ENSMUSP00000141374	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079015	Serpina1c	ENSMUST00000074051	ENSMUSP00000073695	TRANSLATION	protein_coding	-	CCDS26141.1	1	413	0	4	1.5	397.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020640	Itsn2	ENSMUST00000219007	ENSMUSP00000151900	TRANSLATION	protein_coding	-	CCDS36398.1	1	1658	10	23.25	0.5	706.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000020640	Itsn2	ENSMUST00000218072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020640	Itsn2	ENSMUST00000219308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000218923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020640	Itsn2	ENSMUST00000220311	ENSMUSP00000151896	TRANSLATION	protein_coding	-	-	1	1685	10	23.25	0.5	706.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000020640	Itsn2	ENSMUST00000218402	ENSMUSP00000151663	TRANSLATION	protein_coding	stop	-	2	175	5	3.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020640	Itsn2	ENSMUST00000217981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000219832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000219182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020640	Itsn2	ENSMUST00000218985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000217672	ENSMUSP00000151561	TRANSLATION	protein_coding	start	-	1	712	0	6.92	0	240.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020640	Itsn2	ENSMUST00000218211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000217942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020640	Itsn2	ENSMUST00000062580	ENSMUSP00000052758	TRANSLATION	protein_coding	-	CCDS36398.1	5	1658	10	23.25	0.5	706.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000020640	Itsn2	ENSMUST00000218084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042808	Gpx2	ENSMUST00000221421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042808	Gpx2	ENSMUST00000082431	ENSMUSP00000081012	TRANSLATION	protein_coding	-	CCDS25996.1	1	190	0	2	13.5	147.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000042808	Gpx2	ENSMUST00000220569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020600	Slc7a15	ENSMUST00000095863	ENSMUSP00000093548	TRANSLATION	protein_coding	-	CCDS25800.1	1	488	0	1.698	1.5	69.1	12	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020600	Slc7a15	ENSMUST00000129465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020600	Slc7a15	ENSMUST00000165657	ENSMUSP00000129806	TRANSLATION	protein_coding	-	CCDS25801.1	1	228	0	1.02	0.5	24.8	8	-2,-3	-	-	5.76	MINOR
ENSMUSG00000020600	Slc7a15	ENSMUST00000036938	ENSMUSP00000047873	TRANSLATION	protein_coding	-	CCDS25801.1	1	228	0	1.02	0.5	24.8	8	-2,-3	-	-	5.76	MINOR
ENSMUSG00000094502	Ighv1-69	ENSMUST00000199933	ENSMUSP00000143287	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	57.7	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000094502	Ighv1-69	ENSMUST00000103539	ENSMUSP00000100320	TRANSLATION	IG_V_gene	stop	-	-	116	8	1.5	0	57.7	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000035329	Fbxo33	ENSMUST00000043204	ENSMUSP00000035948	TRANSLATION	protein_coding	-	CCDS49072.1	1	562	0	0	2.9	36.7	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000035329	Fbxo33	ENSMUST00000160204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035329	Fbxo33	ENSMUST00000161351	ENSMUSP00000125666	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035329	Fbxo33	ENSMUST00000162855	ENSMUSP00000125231	TRANSLATION	protein_coding	start	-	3	114	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000097929	Tunar	ENSMUST00000180503	ENSMUSP00000147289	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	2	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000097929	Tunar	ENSMUST00000180458	ENSMUSP00000147361	TRANSLATION	protein_coding	-	-	1	48	0	0	2	0	1	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000097929	Tunar	ENSMUST00000222718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021114	Atp6v1d	ENSMUST00000021536	ENSMUSP00000021536	TRANSLATION	protein_coding	-	CCDS26002.1	1	247	0	5.78	14	254.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021114	Atp6v1d	ENSMUST00000219891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021114	Atp6v1d	ENSMUST00000219316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021114	Atp6v1d	ENSMUST00000219377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020950	Foxg1	ENSMUST00000154930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020950	Foxg1	ENSMUST00000135006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020950	Foxg1	ENSMUST00000021333	ENSMUSP00000021333	TRANSLATION	protein_coding	-	CCDS25899.1	1	481	0	0.2	1.5	135	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020950	Foxg1	ENSMUST00000179669	ENSMUSP00000136372	TRANSLATION	protein_coding	-	CCDS25899.1	-	481	0	0.2	1.5	135	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000020884	ENSMUSP00000020884	TRANSLATION	protein_coding	-	CCDS49034.1	1	437	0	6.838	4.1	510.9	0	-4,-5	-	-	10.374	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000143131	ENSMUSP00000117993	TRANSLATION	protein_coding	stop	-	5	70	0	1.425	0	80.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000221129	ENSMUSP00000152515	TRANSLATION	protein_coding	-	-	5	381	0	7.503	16	529.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000095820	ENSMUSP00000093500	TRANSLATION	protein_coding	-	CCDS25827.1	1	427	0	7.003	7.5	522.2	0	-4,-5	-	-	12.286	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000153090	ENSMUSP00000119686	TRANSLATION	protein_coding	stop	-	5	134	0	1.953	0	158	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000127185	ENSMUSP00000118635	TRANSLATION	protein_coding	stop	-	3	63	0	1.2	0	69.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000140751	ENSMUSP00000123415	TRANSLATION	nonsense_mediated_decay	-	-	1	187	0	1.755	0	147.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000222103	ENSMUSP00000152450	TRANSLATION	nonsense_mediated_decay	-	-	3	102	0	1.425	0	74.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020566	Atp6v1c2	ENSMUST00000156727	ENSMUSP00000117139	TRANSLATION	protein_coding	-	-	1	357	0	5.578	0	425	0	-4,-5	-	-	2.148	MINOR
ENSMUSG00000021242	Npc2	ENSMUST00000223200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021242	Npc2	ENSMUST00000021668	ENSMUSP00000021668	TRANSLATION	protein_coding	-	CCDS26050.1	1	149	0	3.2	7.1	105.4	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021242	Npc2	ENSMUST00000221056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071379	Hpcal1	ENSMUST00000222944	ENSMUSP00000152772	TRANSLATION	protein_coding	stop	-	5	168	21	2.33	0	90.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071379	Hpcal1	ENSMUST00000071858	ENSMUSP00000071756	TRANSLATION	protein_coding	-	CCDS25830.1	1	193	22	3.08	21.5	96	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000096199	Ptrhd1	ENSMUST00000179139	ENSMUSP00000137070	TRANSLATION	protein_coding	-	CCDS56829.1	1	140	0	0	6.3	85.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000056899	Immp2l	ENSMUST00000140790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056899	Immp2l	ENSMUST00000080160	ENSMUSP00000079055	TRANSLATION	protein_coding	stop	-	3	79	0	0	5.6	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000056899	Immp2l	ENSMUST00000153184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056899	Immp2l	ENSMUST00000134965	ENSMUSP00000116441	TRANSLATION	protein_coding	-	CCDS83961.1	5	175	0	0	11.6	0	0	-2,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000056899	Immp2l	ENSMUST00000132121	ENSMUSP00000118779	TRANSLATION	protein_coding	-	CCDS83961.1	5	175	0	0	11.6	0	0	-2,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000021276	Cinp	ENSMUST00000223079	ENSMUSP00000152278	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000221414	ENSMUSP00000152521	TRANSLATION	protein_coding	start	-	3	84	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000220631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021276	Cinp	ENSMUST00000223170	ENSMUSP00000152777	TRANSLATION	nonsense_mediated_decay	start	-	3	116	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000221102	ENSMUSP00000152445	TRANSLATION	protein_coding	-	-	2	118	0	0	2.4	0	0	-4,-7	-	-	0.528	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000223407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021276	Cinp	ENSMUST00000221901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021276	Cinp	ENSMUST00000220607	ENSMUSP00000152272	TRANSLATION	protein_coding	-	-	1	262	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000221182	ENSMUSP00000152089	TRANSLATION	protein_coding	-	-	3	139	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000222457	ENSMUSP00000152359	TRANSLATION	protein_coding	-	-	2	145	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021276	Cinp	ENSMUST00000221963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021276	Cinp	ENSMUST00000043716	ENSMUSP00000035245	TRANSLATION	protein_coding	-	CCDS36561.1	1	212	0	0	6.3	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000020948	Klhl28	ENSMUST00000222508	ENSMUSP00000152602	TRANSLATION	protein_coding	-	CCDS25938.1	1	571	0	3.24	15.3	449.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020948	Klhl28	ENSMUST00000021331	ENSMUSP00000021331	TRANSLATION	protein_coding	-	CCDS25938.1	1	571	0	3.24	15.3	449.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020948	Klhl28	ENSMUST00000221957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037594	Clba1	ENSMUST00000177808	ENSMUSP00000137263	TRANSLATION	protein_coding	-	CCDS49192.1	1	321	0	0	1.5	126.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037594	Clba1	ENSMUST00000037014	ENSMUSP00000038002	TRANSLATION	protein_coding	-	CCDS49192.1	1	321	0	0	1.5	126.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043398	Gpr135	ENSMUST00000050649	ENSMUSP00000058762	TRANSLATION	protein_coding	-	CCDS25965.1	-	457	0	0.32	1.5	142.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035148	Gpr33	ENSMUST00000040161	ENSMUSP00000048059	TRANSLATION	protein_coding	-	CCDS25904.1	1	339	0	0.42	0.5	108	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060499	Rpl10l	ENSMUST00000081908	ENSMUSP00000100795	TRANSLATION	protein_coding	-	CCDS49076.1	-	214	0	1	17.5	150.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000020547	Bzw2	ENSMUST00000222842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020547	Bzw2	ENSMUST00000220763	ENSMUSP00000152765	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020547	Bzw2	ENSMUST00000222055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020547	Bzw2	ENSMUST00000221388	ENSMUSP00000152232	TRANSLATION	protein_coding	stop	-	5	200	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020547	Bzw2	ENSMUST00000222279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020547	Bzw2	ENSMUST00000220828	ENSMUSP00000152148	TRANSLATION	protein_coding	stop	-	3	177	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020547	Bzw2	ENSMUST00000223474	ENSMUSP00000152263	TRANSLATION	protein_coding	stop	-	5	208	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020547	Bzw2	ENSMUST00000020856	ENSMUSP00000020856	TRANSLATION	protein_coding	-	CCDS25884.1	1	419	0	1.12	7.5	76.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020547	Bzw2	ENSMUST00000221521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020547	Bzw2	ENSMUST00000223382	ENSMUSP00000152800	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020580	Rock2	ENSMUST00000220688	ENSMUSP00000152813	TRANSLATION	protein_coding	stop	-	1	1444	27	12.55	4.6	321.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020580	Rock2	ENSMUST00000221463	ENSMUSP00000152414	TRANSLATION	protein_coding	start	-	1	262	7	3.5	0	25.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020580	Rock2	ENSMUST00000220542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020580	Rock2	ENSMUST00000020904	ENSMUSP00000020904	TRANSLATION	protein_coding	-	CCDS36410.1	5	1388	27	12.55	6.3	321.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000094124	Ighv1-74	ENSMUST00000196587	ENSMUSP00000143597	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	57.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094124	Ighv1-74	ENSMUST00000103543	ENSMUSP00000100324	TRANSLATION	IG_V_gene	stop	-	-	116	8	1.5	0	57.9	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037336	Mfsd2b	ENSMUST00000147241	ENSMUSP00000114977	TRANSLATION	nonsense_mediated_decay	-	-	3	117	0	1.2	0	52.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037336	Mfsd2b	ENSMUST00000150764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037336	Mfsd2b	ENSMUST00000137337	ENSMUSP00000117057	TRANSLATION	protein_coding	-	-	2	391	0	1.026	0	214.8	15	1,-3	-	-	4.776	MINOR
ENSMUSG00000037336	Mfsd2b	ENSMUST00000153676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037336	Mfsd2b	ENSMUST00000045921	ENSMUSP00000045315	TRANSLATION	protein_coding	-	CCDS36401.2	1	494	0	2.226	1.5	281.3	15	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037336	Mfsd2b	ENSMUST00000085790	ENSMUSP00000082945	TRANSLATION	nonsense_mediated_decay	-	-	2	347	0	2.226	0	203	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000037336	Mfsd2b	ENSMUST00000143446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037336	Mfsd2b	ENSMUST00000125344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096458	Moap1	ENSMUST00000173760	ENSMUSP00000133459	TRANSLATION	protein_coding	-	CCDS26122.1	2	352	0	0	3.9	416.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000096458	Moap1	ENSMUST00000178384	ENSMUSP00000137010	TRANSLATION	protein_coding	-	CCDS26122.1	2	352	0	0	3.9	416.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000018581	Dnah11	ENSMUST00000176756	ENSMUSP00000135748	TRANSLATION	nonsense_mediated_decay	start	-	5	1688	54	22.69	0	1974.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018581	Dnah11	ENSMUST00000175662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018581	Dnah11	ENSMUST00000176239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018581	Dnah11	ENSMUST00000084806	ENSMUSP00000081867	TRANSLATION	protein_coding	-	CCDS36578.1	1	4488	65	40.96	1.5	3941.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072905	Gm2016	ENSMUST00000110147	ENSMUSP00000105774	TRANSLATION	protein_coding	-	CCDS49128.1	1	144	0	1	3	68.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066363	Serpina3f	ENSMUST00000167049	ENSMUSP00000126520	TRANSLATION	protein_coding	-	CCDS26149.1	1	445	0	3.8	0.5	393.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066363	Serpina3f	ENSMUST00000121337	ENSMUSP00000113945	TRANSLATION	protein_coding	-	CCDS26149.1	1	445	0	3.8	0.5	393.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000066363	Serpina3f	ENSMUST00000101080	ENSMUSP00000098641	TRANSLATION	protein_coding	-	CCDS26149.1	1	445	0	3.8	0.5	393.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000076676	Ighv12-3	ENSMUST00000103485	ENSMUSP00000100266	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.1	0	41	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000059669	Taf1b	ENSMUST00000221372	ENSMUSP00000152701	TRANSLATION	nonsense_mediated_decay	-	-	1	69	4	0	0	44.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059669	Taf1b	ENSMUST00000222710	ENSMUSP00000152862	TRANSLATION	protein_coding	-	-	1	69	4	0	0	44.3	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000059669	Taf1b	ENSMUST00000223503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059669	Taf1b	ENSMUST00000075954	ENSMUSP00000075339	TRANSLATION	protein_coding	-	CCDS36419.1	1	586	4	0	1.5	39.5	0	-4,-5	-	-	9.352	PRINCIPAL:2
ENSMUSG00000041702	Btbd7	ENSMUST00000221914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041702	Btbd7	ENSMUST00000221376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041702	Btbd7	ENSMUST00000045652	ENSMUSP00000046951	TRANSLATION	protein_coding	-	CCDS26125.1	1	1130	0	0	1.5	120.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041702	Btbd7	ENSMUST00000221925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041702	Btbd7	ENSMUST00000220596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041702	Btbd7	ENSMUST00000223554	ENSMUSP00000152426	TRANSLATION	protein_coding	-	CCDS26125.1	1	1130	0	0	1.5	120.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000076668	Ighv7-4	ENSMUST00000192499	ENSMUSP00000142041	TRANSLATION	IG_V_gene	stop	-	-	121	3	1.5	0	58.5	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076668	Ighv7-4	ENSMUST00000103477	ENSMUSP00000100258	TRANSLATION	IG_V_gene	stop	-	-	120	3	1.35	0	58.5	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037787	Apopt1	ENSMUST00000159557	ENSMUSP00000124919	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037787	Apopt1	ENSMUST00000162316	ENSMUSP00000125711	TRANSLATION	protein_coding	-	-	1	130	0	0	0	104.6	0	-4,0	-	-	1.764	MINOR
ENSMUSG00000037787	Apopt1	ENSMUST00000163220	ENSMUSP00000131169	TRANSLATION	protein_coding	-	CCDS49181.1	2	194	0	0	0.5	146.6	0	-4,0	-	-	4.284	MINOR
ENSMUSG00000037787	Apopt1	ENSMUST00000040519	ENSMUSP00000038865	TRANSLATION	protein_coding	-	CCDS26186.1	1	192	0	0	1.7	175.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000041347	Bdkrb1	ENSMUST00000041229	ENSMUSP00000045335	TRANSLATION	protein_coding	-	CCDS26155.1	-	334	0	1.36	1.5	152.6	9	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041347	Bdkrb1	ENSMUST00000183086	ENSMUSP00000138216	TRANSLATION	protein_coding	stop	-	5	268	0	0.56	0	113	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000041347	Bdkrb1	ENSMUST00000182899	ENSMUSP00000138118	TRANSLATION	protein_coding	-	CCDS26155.1	5	334	0	1.36	1.5	152.6	9	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020994	Pnn	ENSMUST00000021381	ENSMUSP00000021381	TRANSLATION	protein_coding	-	CCDS25933.1	1	726	0	0	0.5	313.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020994	Pnn	ENSMUST00000219176	ENSMUSP00000151381	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0	0	90.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020994	Pnn	ENSMUST00000217773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020994	Pnn	ENSMUST00000217676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096672	Ighv1-63	ENSMUST00000103534	ENSMUSP00000100315	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	56.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021118	Plek2	ENSMUST00000021544	ENSMUSP00000021544	TRANSLATION	protein_coding	-	CCDS26004.1	1	353	0	7.12	7.6	168	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000059060	Rad51b	ENSMUST00000221257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059060	Rad51b	ENSMUST00000079533	ENSMUSP00000078490	TRANSLATION	protein_coding	-	CCDS56845.1	1	258	7	3.622	0.5	135	0	-4,-2	-	-	13.98	MINOR
ENSMUSG00000059060	Rad51b	ENSMUST00000171210	ENSMUSP00000128357	TRANSLATION	protein_coding	-	-	1	350	7	4.69	5.4	166.4	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000059060	Rad51b	ENSMUST00000218039	ENSMUSP00000152105	TRANSLATION	protein_coding	-	-	5	350	7	4.69	5.4	166.4	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000046675	Tmem251	ENSMUST00000057416	ENSMUSP00000054611	TRANSLATION	protein_coding	-	CCDS49146.1	1	163	0	0	6.4	230.7	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000041536	Serpina3a	ENSMUST00000021496	ENSMUSP00000021496	TRANSLATION	protein_coding	-	CCDS49156.1	5	422	0	3.8	0.5	351.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041536	Serpina3a	ENSMUST00000109965	ENSMUSP00000105591	TRANSLATION	protein_coding	-	CCDS79153.1	1	232	0	2.935	0.5	176.6	0	-1,-7	-	-	4.272	MINOR
ENSMUSG00000041536	Serpina3a	ENSMUST00000185595	ENSMUSP00000140024	TRANSLATION	protein_coding	-	CCDS49156.1	1	422	0	3.8	0.5	351.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000020598	Nrcam	ENSMUST00000219939	ENSMUSP00000152002	TRANSLATION	nonsense_mediated_decay	start	-	5	30	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000220082	ENSMUSP00000151824	TRANSLATION	protein_coding	start	-	1	220	0	1	0	97.7	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000219906	ENSMUSP00000151243	TRANSLATION	nonsense_mediated_decay	start	-	3	41	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000110748	ENSMUSP00000106376	TRANSLATION	protein_coding	-	CCDS49057.1	1	1186	0	19.9	6.5	527.3	3	0,-2	-	-	12.542	ALTERNATIVE:1
ENSMUSG00000020598	Nrcam	ENSMUST00000217796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020598	Nrcam	ENSMUST00000218540	ENSMUSP00000151732	TRANSLATION	protein_coding	stop	-	3	81	0	1.63	0	34.3	0	0,-2	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000020939	ENSMUSP00000020939	TRANSLATION	protein_coding	-	CCDS49056.1	1	1256	0	20.63	0.5	527.3	3	0,-2	-	-	12	PRINCIPAL:4
ENSMUSG00000020598	Nrcam	ENSMUST00000219592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020598	Nrcam	ENSMUST00000220126	ENSMUSP00000151296	TRANSLATION	protein_coding	stop	-	5	175	0	3.63	0	50.9	0	0,-2	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000218940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020598	Nrcam	ENSMUST00000218431	ENSMUSP00000151873	TRANSLATION	protein_coding	stop	-	3	232	0	4.63	0	50.9	0	0,-2	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000217907	ENSMUSP00000151419	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000218062	ENSMUSP00000151475	TRANSLATION	protein_coding	start	-	1	168	0	0	0	96	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000020598	Nrcam	ENSMUST00000220130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020598	Nrcam	ENSMUST00000218805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020598	Nrcam	ENSMUST00000219928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020598	Nrcam	ENSMUST00000220123	ENSMUSP00000151844	TRANSLATION	nonsense_mediated_decay	-	-	1	1134	0	20.63	0	459.6	3	0,-2	-	-	-1	MINOR
ENSMUSG00000062198	2700097O09Rik	ENSMUST00000021406	ENSMUSP00000021406	TRANSLATION	protein_coding	-	CCDS25912.1	1	301	16	0	3.9	0	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000062198	2700097O09Rik	ENSMUST00000222572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062198	2700097O09Rik	ENSMUST00000136281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062198	2700097O09Rik	ENSMUST00000156852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034111	Tmed8	ENSMUST00000037418	ENSMUSP00000043742	TRANSLATION	protein_coding	-	CCDS26072.1	1	326	0	1.7	3.9	234.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020647	Ncoa1	ENSMUST00000085814	ENSMUSP00000082971	TRANSLATION	protein_coding	-	CCDS25789.1	1	1405	0	8.9	1.5	531.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020647	Ncoa1	ENSMUST00000217822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020647	Ncoa1	ENSMUST00000219373	ENSMUSP00000151608	TRANSLATION	protein_coding	start	-	2	154	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020647	Ncoa1	ENSMUST00000218191	ENSMUSP00000151744	TRANSLATION	protein_coding	start	-	1	430	0	0	0	110.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020647	Ncoa1	ENSMUST00000220434	ENSMUSP00000151358	TRANSLATION	protein_coding	-	-	1	1447	0	8.9	0.5	531.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020647	Ncoa1	ENSMUST00000219715	ENSMUSP00000151302	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020647	Ncoa1	ENSMUST00000219275	ENSMUSP00000151904	TRANSLATION	protein_coding	start	-	3	99	0	2.1	0	54.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020647	Ncoa1	ENSMUST00000217794	ENSMUSP00000151716	TRANSLATION	nonsense_mediated_decay	-	-	1	1330	0	8.9	0	531.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020647	Ncoa1	ENSMUST00000217674	ENSMUSP00000151610	TRANSLATION	protein_coding	stop	-	5	922	0	7.386	0	398	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000113489	Gm16381	ENSMUST00000220528	ENSMUSP00000152141	TRANSLATION	protein_coding	-	CCDS49125.1	-	73	0	1	19.5	25.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036613	Eipr1	ENSMUST00000221574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036613	Eipr1	ENSMUST00000221555	ENSMUSP00000152219	TRANSLATION	protein_coding	stop	-	3	172	0	0.42	0	27.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036613	Eipr1	ENSMUST00000221877	ENSMUSP00000152220	TRANSLATION	protein_coding	-	CCDS25855.1	1	386	0	3.48	12.8	53.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036613	Eipr1	ENSMUST00000035657	ENSMUSP00000038845	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036613	Eipr1	ENSMUST00000220933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036613	Eipr1	ENSMUST00000220878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036613	Eipr1	ENSMUST00000222407	ENSMUSP00000152103	TRANSLATION	protein_coding	-	-	3	37	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021086	Ccdc175	ENSMUST00000021494	ENSMUSP00000021494	TRANSLATION	protein_coding	-	CCDS49084.1	5	822	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000020627	Klhl29	ENSMUST00000020958	ENSMUSP00000020958	TRANSLATION	protein_coding	-	CCDS49021.1	1	875	0	6.48	6.3	300.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000020627	Klhl29	ENSMUST00000218384	ENSMUSP00000151284	TRANSLATION	protein_coding	-	-	1	814	0	5.88	0	300.3	0	-4,-7	-	-	10.8	MINOR
ENSMUSG00000035653	Lrfn5	ENSMUST00000119481	ENSMUSP00000113123	TRANSLATION	protein_coding	-	CCDS79117.1	1	719	0	0.36	7.5	138.5	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000035653	Lrfn5	ENSMUST00000130887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035653	Lrfn5	ENSMUST00000189933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035653	Lrfn5	ENSMUST00000138980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035653	Lrfn5	ENSMUST00000055815	ENSMUSP00000051546	TRANSLATION	protein_coding	-	CCDS25936.1	1	746	0	0.36	0.5	138.5	1	4,-1	-	-	12	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000161712	ENSMUSP00000124933	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000160919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079036	Alkbh1	ENSMUST00000162247	ENSMUSP00000124360	TRANSLATION	nonsense_mediated_decay	-	-	1	200	0	0	1	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000160687	ENSMUSP00000124892	TRANSLATION	protein_coding	start/stop	-	3	180	10	1.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000162986	ENSMUSP00000125372	TRANSLATION	nonsense_mediated_decay	-	-	3	78	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000160850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079036	Alkbh1	ENSMUST00000159079	ENSMUSP00000124445	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000162961	ENSMUSP00000124565	TRANSLATION	protein_coding	-	CCDS49120.1	1	389	14	1.9	7.5	0	0	-2,0	-	-	15	PRINCIPAL:1
ENSMUSG00000079036	Alkbh1	ENSMUST00000091090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079036	Alkbh1	ENSMUST00000185301	ENSMUSP00000140233	TRANSLATION	protein_coding	-	-	-	135	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000160113	ENSMUSP00000124691	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000079036	Alkbh1	ENSMUST00000176758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020570	Sypl	ENSMUST00000076698	ENSMUSP00000075990	TRANSLATION	protein_coding	-	CCDS25872.1	1	261	0	0	0.5	149.6	3	-4,0	-	-	6	PRINCIPAL:4
ENSMUSG00000020570	Sypl	ENSMUST00000020885	ENSMUSP00000020885	TRANSLATION	protein_coding	-	CCDS25873.1	1	243	0	0	2.9	149.6	3	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000020570	Sypl	ENSMUST00000131562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020570	Sypl	ENSMUST00000122861	ENSMUSP00000122695	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020570	Sypl	ENSMUST00000129592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020570	Sypl	ENSMUST00000139339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020570	Sypl	ENSMUST00000218816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020659	Cbll1	ENSMUST00000188326	ENSMUSP00000139809	TRANSLATION	protein_coding	-	CCDS56835.1	2	332	12	2.5	0.5	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000020659	Cbll1	ENSMUST00000064240	ENSMUSP00000063266	TRANSLATION	protein_coding	-	-	5	488	12	2.5	7.5	0	0	-4,-5	-	-	14.168	MINOR
ENSMUSG00000020659	Cbll1	ENSMUST00000101499	ENSMUSP00000099038	TRANSLATION	protein_coding	-	CCDS56834.1	1	491	12	2.5	13	0	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000020659	Cbll1	ENSMUST00000085487	ENSMUSP00000082616	TRANSLATION	protein_coding	-	-	5	416	12	2.5	0	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000020659	Cbll1	ENSMUST00000185739	ENSMUSP00000141007	TRANSLATION	protein_coding	-	-	1	490	12	2.5	13	0	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000020609	Apob	ENSMUST00000171271	ENSMUSP00000127147	TRANSLATION	protein_coding	stop	-	1	329	0	0	0	157.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000020609	Apob	ENSMUST00000037811	ENSMUSP00000036044	TRANSLATION	protein_coding	-	CCDS49022.1	1	4505	0	2.58	1.5	761.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020609	Apob	ENSMUST00000171239	ENSMUSP00000129496	TRANSLATION	protein_coding	start	-	1	411	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020609	Apob	ENSMUST00000037520	ENSMUSP00000035761	TRANSLATION	protein_coding	stop	-	5	4456	0	2.58	0	761.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000021194	Chga	ENSMUST00000223100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021194	Chga	ENSMUST00000021610	ENSMUSP00000021610	TRANSLATION	protein_coding	-	CCDS26120.1	1	463	0	0	0.5	391.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000021194	Chga	ENSMUST00000220839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021278	Amn	ENSMUST00000220903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021278	Amn	ENSMUST00000220551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021278	Amn	ENSMUST00000021707	ENSMUSP00000021707	TRANSLATION	protein_coding	-	CCDS36564.1	1	458	0	0	1.5	470.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000021239	Vsx2	ENSMUST00000169934	ENSMUSP00000131009	TRANSLATION	protein_coding	-	CCDS79136.1	1	380	0	2.05	2.7	111.5	0	-4,-5	-	-	12.786	MINOR
ENSMUSG00000021239	Vsx2	ENSMUST00000021665	ENSMUSP00000021665	TRANSLATION	protein_coding	-	CCDS36493.1	1	361	0	2.05	7.5	111.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044715	Gskip	ENSMUST00000222841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044715	Gskip	ENSMUST00000222284	ENSMUSP00000152722	TRANSLATION	protein_coding	-	-	1	97	0	1.264	0	59	0	-4,-5	-	-	6.42	MINOR
ENSMUSG00000044715	Gskip	ENSMUST00000051934	ENSMUSP00000057939	TRANSLATION	protein_coding	-	CCDS49161.1	1	144	0	2	1.5	115.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000102313	Ighv1-62-1	ENSMUST00000171270	ENSMUSP00000132101	TRANSLATION	IG_V_gene	start/stop	-	-	30	0	1	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000102313	Ighv1-62-1	ENSMUST00000103503	ENSMUSP00000100284	TRANSLATION	IG_V_gene	stop	-	-	116	7	2.5	0	52.3	0	1,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096753	Fam181a	ENSMUST00000191218	ENSMUSP00000140842	TRANSLATION	protein_coding	-	CCDS56858.1	5	292	0	0	1.5	374.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000096753	Fam181a	ENSMUST00000179363	ENSMUSP00000136681	TRANSLATION	protein_coding	-	CCDS56858.1	2	292	0	0	1.5	374.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000096753	Fam181a	ENSMUST00000189885	ENSMUSP00000139607	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	241.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000104213	Ighd	ENSMUST00000194162	ENSMUSP00000141353	TRANSLATION	IG_C_gene	start	-	-	291	0	2.42	0	47.8	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000104213	Ighd	ENSMUST00000192250	ENSMUSP00000141946	TRANSLATION	IG_C_gene	start	-	-	258	0	2.17	0	47.8	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000020661	Dnmt3a	ENSMUST00000173197	ENSMUSP00000133567	TRANSLATION	protein_coding	start	-	3	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174733	ENSMUSP00000134492	TRANSLATION	nonsense_mediated_decay	start	-	5	107	14	2.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172509	ENSMUSP00000133869	TRANSLATION	protein_coding	stop	-	5	332	0	3.93	0	49.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172749	ENSMUSP00000134567	TRANSLATION	protein_coding	start/stop	-	3	184	0	3.76	0	44.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000085826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020661	Dnmt3a	ENSMUST00000173700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174817	ENSMUSP00000134009	TRANSLATION	protein_coding	-	CCDS36397.1	1	908	26	16.26	6.3	49.2	0	-4,-5	-	-	19.962	ALTERNATIVE:1
ENSMUSG00000020661	Dnmt3a	ENSMUST00000111186	ENSMUSP00000106817	TRANSLATION	protein_coding	-	CCDS25784.1	5	689	26	16.26	6.4	49.2	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174483	ENSMUSP00000133938	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172913	ENSMUSP00000134496	TRANSLATION	protein_coding	start	-	3	72	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172816	ENSMUSP00000134632	TRANSLATION	protein_coding	stop	-	2	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174102	ENSMUSP00000134480	TRANSLATION	protein_coding	stop	-	3	140	0	1.6	0	28.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172719	ENSMUSP00000133501	TRANSLATION	protein_coding	stop	-	5	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172689	ENSMUSP00000133543	TRANSLATION	protein_coding	-	CCDS25784.1	1	689	26	16.26	6.4	49.2	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174774	ENSMUSP00000134529	TRANSLATION	protein_coding	stop	-	5	181	0	3.93	0	49.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020661	Dnmt3a	ENSMUST00000020991	ENSMUSP00000020991	TRANSLATION	protein_coding	-	CCDS36397.1	1	908	26	16.26	6.3	49.2	0	-4,-5	-	-	19.962	ALTERNATIVE:1
ENSMUSG00000020661	Dnmt3a	ENSMUST00000174272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020661	Dnmt3a	ENSMUST00000172879	ENSMUSP00000134689	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043122	A530016L24Rik	ENSMUST00000223266	ENSMUSP00000152594	TRANSLATION	protein_coding	-	-	1	95	0	0	0	98.3	0	-4,-2	-	-	0.666	MINOR
ENSMUSG00000043122	A530016L24Rik	ENSMUST00000057465	ENSMUSP00000056220	TRANSLATION	protein_coding	-	CCDS49188.1	1	165	0	0	0.5	187.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035614	Togaram1	ENSMUST00000221400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035614	Togaram1	ENSMUST00000220487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035614	Togaram1	ENSMUST00000221836	ENSMUSP00000152271	TRANSLATION	nonsense_mediated_decay	start	-	1	677	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035614	Togaram1	ENSMUST00000066296	ENSMUSP00000070382	TRANSLATION	protein_coding	-	CCDS49075.1	1	1776	0	1	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000035614	Togaram1	ENSMUST00000222425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035614	Togaram1	ENSMUST00000223166	ENSMUSP00000152616	TRANSLATION	protein_coding	-	-	1	1826	0	1	1.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000035614	Togaram1	ENSMUST00000222473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035614	Togaram1	ENSMUST00000223311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044456	Rin3	ENSMUST00000137249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044456	Rin3	ENSMUST00000139686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044456	Rin3	ENSMUST00000150795	ENSMUSP00000123268	TRANSLATION	protein_coding	-	-	1	127	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044456	Rin3	ENSMUST00000101114	ENSMUSP00000098673	TRANSLATION	protein_coding	-	-	1	198	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044456	Rin3	ENSMUST00000056950	ENSMUSP00000060771	TRANSLATION	protein_coding	-	CCDS26118.1	1	980	0	1.42	1.5	96	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000044456	Rin3	ENSMUST00000133820	ENSMUSP00000122646	TRANSLATION	protein_coding	-	CCDS49145.1	1	900	0	1.42	1.5	96	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000044456	Rin3	ENSMUST00000131076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021248	Tmed10	ENSMUST00000040766	ENSMUSP00000037583	TRANSLATION	protein_coding	-	CCDS36498.1	1	219	0	2.83	7.5	162.3	1	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021248	Tmed10	ENSMUST00000222585	ENSMUSP00000152811	TRANSLATION	protein_coding	-	-	3	116	0	1.08	0	110.1	1	-4,-5	-	-	5.16	MINOR
ENSMUSG00000021248	Tmed10	ENSMUST00000222529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021248	Tmed10	ENSMUST00000223375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054003	Tdrd9	ENSMUST00000192125	ENSMUSP00000142236	TRANSLATION	nonsense_mediated_decay	start	-	1	217	8	3.04	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054003	Tdrd9	ENSMUST00000079009	ENSMUSP00000078022	TRANSLATION	protein_coding	-	CCDS49184.1	1	1383	13	13	1.5	185.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054003	Tdrd9	ENSMUST00000193586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054003	Tdrd9	ENSMUST00000193630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054003	Tdrd9	ENSMUST00000191808	ENSMUSP00000141719	TRANSLATION	nonsense_mediated_decay	start	-	1	540	8	9.34	0	98.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054003	Tdrd9	ENSMUST00000194800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098530	Gm28051	ENSMUST00000179306	ENSMUSP00000136193	TRANSLATION	protein_coding,RT	-	-	2	81	0	0	0	82.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000054204	Alkal2	ENSMUST00000067087	ENSMUSP00000070037	TRANSLATION	protein_coding	-	CCDS49044.1	1	151	0	0	2.7	187.5	0	3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000051721	Wdcp	ENSMUST00000085793	ENSMUSP00000082948	TRANSLATION	protein_coding	-	CCDS49019.1	2	663	0	0	0.5	920.7	0	-4,-7	-	-	2.844	MINOR
ENSMUSG00000051721	Wdcp	ENSMUST00000223551	ENSMUSP00000152571	TRANSLATION	protein_coding	-	-	5	710	0	0	0.5	973.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051721	Wdcp	ENSMUST00000219069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051721	Wdcp	ENSMUST00000053034	ENSMUSP00000054102	TRANSLATION	protein_coding	-	CCDS25793.1	1	635	0	0	0.5	855.9	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051721	Wdcp	ENSMUST00000220170	ENSMUSP00000151965	TRANSLATION	protein_coding	stop	-	1	540	0	0	0	781.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051721	Wdcp	ENSMUST00000220215	ENSMUSP00000151585	TRANSLATION	protein_coding	-	CCDS49019.1	1	663	0	0	0.5	920.7	0	-4,-7	-	-	2.844	MINOR
ENSMUSG00000102888	Ighv1-11	ENSMUST00000191801	ENSMUSP00000141570	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	42.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000048004	Tmem196	ENSMUST00000184820	ENSMUSP00000138937	TRANSLATION	protein_coding	start	-	3	151	0	0	0	0	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000048004	Tmem196	ENSMUST00000058644	ENSMUSP00000054994	TRANSLATION	protein_coding	-	CCDS49200.1	5	176	0	0	12.8	0	8	1,-3	-	-	4	PRINCIPAL:3
ENSMUSG00000048004	Tmem196	ENSMUST00000223374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048004	Tmem196	ENSMUST00000184069	ENSMUSP00000139022	TRANSLATION	protein_coding	start	-	5	153	0	0	0	0	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000048004	Tmem196	ENSMUST00000184209	ENSMUSP00000139033	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0	0	0	2	1,-3	-	-	-1	MINOR
ENSMUSG00000048004	Tmem196	ENSMUST00000183694	ENSMUSP00000138921	TRANSLATION	protein_coding	-	CCDS79159.1	3	182	0	0	9.6	0	8	1,-3	-	-	2.916	ALTERNATIVE:1
ENSMUSG00000020571	Pdia6	ENSMUST00000163000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020571	Pdia6	ENSMUST00000159434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020571	Pdia6	ENSMUST00000057288	ENSMUSP00000052912	TRANSLATION	protein_coding	-	-	1	440	8	7.38	6	209.3	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000020571	Pdia6	ENSMUST00000161853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020571	Pdia6	ENSMUST00000239402	ENSMUSP00000159304	TRANSLATION	protein_coding	-	CCDS25826.1	-	445	8	7.38	1.5	209.3	0	2,-3	-	-	18.2	MINOR
ENSMUSG00000020571	Pdia6	ENSMUST00000162936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090843	Heatr4	ENSMUST00000164935	ENSMUSP00000129832	TRANSLATION	protein_coding	-	-	5	955	0	0	0	29.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000020630	Rnaseh1	ENSMUST00000221496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020630	Rnaseh1	ENSMUST00000020959	ENSMUSP00000020959	TRANSLATION	protein_coding	-	CCDS25852.1	1	285	7	5.8	3.9	154.4	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000020630	Rnaseh1	ENSMUST00000223322	ENSMUSP00000152845	TRANSLATION	nonsense_mediated_decay	-	-	1	198	2	2.8	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020630	Rnaseh1	ENSMUST00000222767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094268	Ighd5-8	ENSMUST00000178909	ENSMUSP00000141376	TRANSLATION	IG_D_gene	start/stop	-	-	9	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079104	Prps1l3	ENSMUST00000139049	ENSMUSP00000133736	TRANSLATION	protein_coding	-	CCDS56839.1	1	318	15	1	19.5	288.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042029	Ncapg2	ENSMUST00000221114	ENSMUSP00000152505	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042029	Ncapg2	ENSMUST00000084828	ENSMUSP00000081889	TRANSLATION	protein_coding	-	CCDS26212.1	5	1138	0	0	1.5	196.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042029	Ncapg2	ENSMUST00000222469	ENSMUSP00000152384	TRANSLATION	protein_coding	stop	-	3	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042029	Ncapg2	ENSMUST00000221970	ENSMUSP00000152831	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042029	Ncapg2	ENSMUST00000220608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042029	Ncapg2	ENSMUST00000222761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005656	Snx6	ENSMUST00000218934	ENSMUSP00000151488	TRANSLATION	protein_coding	-	-	5	290	0	2.1	1.2	73.5	0	-4,-5	-	-	3.74	MINOR
ENSMUSG00000005656	Snx6	ENSMUST00000218066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005656	Snx6	ENSMUST00000218337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005656	Snx6	ENSMUST00000219781	ENSMUSP00000151460	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	2	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005656	Snx6	ENSMUST00000005798	ENSMUSP00000005798	TRANSLATION	protein_coding	-	CCDS36447.1	1	406	0	4.85	15.1	120.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000005656	Snx6	ENSMUST00000219865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005656	Snx6	ENSMUST00000219722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005656	Snx6	ENSMUST00000219302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090812	Samd15	ENSMUST00000183118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090812	Samd15	ENSMUST00000183251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090812	Samd15	ENSMUST00000169669	ENSMUSP00000126421	TRANSLATION	protein_coding	start/stop	-	-	398	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090812	Samd15	ENSMUST00000182869	ENSMUSP00000138551	TRANSLATION	protein_coding	-	CCDS70409.1	5	620	0	1.44	0.5	41.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021188	Trip11	ENSMUST00000085086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021188	Trip11	ENSMUST00000177480	ENSMUSP00000135128	TRANSLATION	nonsense_mediated_decay	start	-	3	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021188	Trip11	ENSMUST00000177183	ENSMUSP00000134976	TRANSLATION	protein_coding	start	-	5	1691	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021188	Trip11	ENSMUST00000177536	ENSMUSP00000135669	TRANSLATION	protein_coding	stop	-	1	527	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021188	Trip11	ENSMUST00000176728	ENSMUSP00000134992	TRANSLATION	protein_coding	stop	-	1	291	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021188	Trip11	ENSMUST00000021605	ENSMUSP00000021605	TRANSLATION	protein_coding	-	CCDS49143.1	1	1976	0	0	0.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000047534	Mis18bp1	ENSMUST00000149986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047534	Mis18bp1	ENSMUST00000221296	ENSMUSP00000152132	TRANSLATION	protein_coding	stop	-	5	168	0	0	0	94.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047534	Mis18bp1	ENSMUST00000124201	ENSMUSP00000152203	TRANSLATION	protein_coding	-	-	3	54	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000047534	Mis18bp1	ENSMUST00000052201	ENSMUSP00000052109	TRANSLATION	protein_coding	-	CCDS25942.1	1	998	0	1	0.5	119.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047534	Mis18bp1	ENSMUST00000140391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047534	Mis18bp1	ENSMUST00000222244	ENSMUSP00000152490	TRANSLATION	protein_coding	-	-	1	434	0	0	0	94.3	0	-4,-7	-	-	4.5	MINOR
ENSMUSG00000047534	Mis18bp1	ENSMUST00000141456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047534	Mis18bp1	ENSMUST00000131753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103254	Ighv1-15	ENSMUST00000192077	ENSMUSP00000141908	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	51.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000079061	Gm11042	ENSMUST00000110441	ENSMUSP00000106071	TRANSLATION	protein_coding	start/stop	-	5	40	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000079034	Gm8300	ENSMUST00000110152	ENSMUSP00000105780	TRANSLATION	protein_coding	-	CCDS49122.1	1	144	0	1	3	68.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000076671	Ighv13-2	ENSMUST00000125484	ENSMUSP00000141621	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.5	0	58	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076671	Ighv13-2	ENSMUST00000183954	ENSMUSP00000139850	TRANSLATION	IG_V_gene	start/stop	-	-	100	3	1	0	58	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000050545	Fam228b	ENSMUST00000218856	ENSMUSP00000151222	TRANSLATION	protein_coding	start	-	2	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050545	Fam228b	ENSMUST00000223500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050545	Fam228b	ENSMUST00000218905	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050545	Fam228b	ENSMUST00000218199	ENSMUSP00000151649	TRANSLATION	nonsense_mediated_decay	-	-	1	191	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050545	Fam228b	ENSMUST00000053458	ENSMUSP00000050881	TRANSLATION	protein_coding	-	CCDS36400.1	1	232	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000050545	Fam228b	ENSMUST00000217684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050545	Fam228b	ENSMUST00000218575	ENSMUSP00000151270	TRANSLATION	protein_coding	-	-	2	181	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000050545	Fam228b	ENSMUST00000218422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050545	Fam228b	ENSMUST00000219898	ENSMUSP00000151706	TRANSLATION	protein_coding	-	-	3	45	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000021124	Vti1b	ENSMUST00000162789	ENSMUSP00000124260	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021124	Vti1b	ENSMUST00000162569	ENSMUSP00000124741	TRANSLATION	protein_coding	start	-	3	182	0	2.5	0	78.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021124	Vti1b	ENSMUST00000055262	ENSMUSP00000057462	TRANSLATION	protein_coding	-	CCDS26008.1	1	232	0	5.08	8.8	141.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021124	Vti1b	ENSMUST00000163031	ENSMUSP00000124464	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.83	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047415	Gpr68	ENSMUST00000053668	ENSMUSP00000057510	TRANSLATION	protein_coding	-	CCDS26109.1	2	365	0	0.6	2.9	138.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047415	Gpr68	ENSMUST00000124459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047415	Gpr68	ENSMUST00000128306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047415	Gpr68	ENSMUST00000222453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047415	Gpr68	ENSMUST00000110065	ENSMUSP00000105692	TRANSLATION	protein_coding	-	CCDS26109.1	1	365	0	0.6	2.9	138.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047415	Gpr68	ENSMUST00000135684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047415	Gpr68	ENSMUST00000110066	ENSMUSP00000105693	TRANSLATION	protein_coding	-	CCDS26109.1	3	365	0	0.6	2.9	138.2	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020629	Adi1	ENSMUST00000135772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020629	Adi1	ENSMUST00000138081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020629	Adi1	ENSMUST00000020957	ENSMUSP00000020957	TRANSLATION	protein_coding	-	CCDS25853.1	1	179	4	4	15.1	205.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000064326	Siva1	ENSMUST00000222353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064326	Siva1	ENSMUST00000109755	ENSMUSP00000105377	TRANSLATION	protein_coding	-	CCDS49189.1	1	110	3	0	0.5	167	0	-4,-5	-	-	3	MINOR
ENSMUSG00000064326	Siva1	ENSMUST00000222368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064326	Siva1	ENSMUST00000222729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064326	Siva1	ENSMUST00000021728	ENSMUSP00000021728	TRANSLATION	protein_coding	-	CCDS26193.1	1	175	3	0	1.5	288.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000044912	Syt16	ENSMUST00000238790	ENSMUSP00000158983	TRANSLATION	protein_coding	-	-	-	639	0	2	0.5	76	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000044912	Syt16	ENSMUST00000221220	ENSMUSP00000152623	TRANSLATION	protein_coding	-	CCDS49089.1	1	549	0	2	0.5	76	1	-2,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000044912	Syt16	ENSMUST00000221073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044912	Syt16	ENSMUST00000221973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044912	Syt16	ENSMUST00000110451	ENSMUSP00000106081	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000034883	Lrr1	ENSMUST00000222520	ENSMUSP00000152301	TRANSLATION	protein_coding	-	-	1	107	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000034883	Lrr1	ENSMUST00000222382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034883	Lrr1	ENSMUST00000110621	ENSMUSP00000106251	TRANSLATION	protein_coding	-	CCDS36462.1	1	422	0	0.6	2.7	36	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021127	Zfp36l1	ENSMUST00000165114	ENSMUSP00000127522	TRANSLATION	protein_coding	-	CCDS26010.1	5	338	8	0.6	8.8	188.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000021127	Zfp36l1	ENSMUST00000219642	ENSMUSP00000151682	TRANSLATION	protein_coding	-	-	3	84	0	0	0	24.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021127	Zfp36l1	ENSMUST00000218835	ENSMUSP00000151269	TRANSLATION	protein_coding	-	-	3	57	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021127	Zfp36l1	ENSMUST00000021552	ENSMUSP00000021552	TRANSLATION	protein_coding	-	CCDS26010.1	1	338	8	0.6	8.8	188.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000054894	Dmac2l	ENSMUST00000021372	ENSMUSP00000021372	TRANSLATION	protein_coding	-	CCDS25954.1	1	200	3	4.43	5.1	0	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000054894	Dmac2l	ENSMUST00000220539	ENSMUSP00000152071	TRANSLATION	protein_coding	stop	-	3	34	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054894	Dmac2l	ENSMUST00000220916	ENSMUSP00000152430	TRANSLATION	protein_coding	-	CCDS25954.1	1	200	3	4.43	5.1	0	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000054894	Dmac2l	ENSMUST00000220460	ENSMUSP00000152757	TRANSLATION	protein_coding	stop	-	5	135	3	2.68	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054894	Dmac2l	ENSMUST00000222950	ENSMUSP00000152704	TRANSLATION	protein_coding	stop	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052593	Adam17	ENSMUST00000145118	ENSMUSP00000136407	TRANSLATION	nonsense_mediated_decay	-	-	1	655	10	9.24	0	266.4	0	4,-2	-	-	-1	MINOR
ENSMUSG00000052593	Adam17	ENSMUST00000101551	ENSMUSP00000099087	TRANSLATION	protein_coding	-	CCDS70376.1	1	846	10	9.67	0.5	272.5	1	4,-2	-	-	17.838	ALTERNATIVE:2
ENSMUSG00000052593	Adam17	ENSMUST00000155115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052593	Adam17	ENSMUST00000132339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052593	Adam17	ENSMUST00000141799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052593	Adam17	ENSMUST00000142092	ENSMUSP00000136255	TRANSLATION	nonsense_mediated_decay	-	-	3	94	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000052593	Adam17	ENSMUST00000232107	ENSMUSP00000155990	TRANSLATION	protein_coding	-	-	-	123	0	0	0	0	0	4,-2	-	-	0	MINOR
ENSMUSG00000052593	Adam17	ENSMUST00000232526	ENSMUSP00000155953	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	0	0	0	0	4,-2	-	-	-1	MINOR
ENSMUSG00000052593	Adam17	ENSMUST00000064536	ENSMUSP00000067953	TRANSLATION	protein_coding	-	CCDS25836.1	1	827	10	9.57	3.9	275.2	1	4,-2	-	-	18.802	PRINCIPAL:3
ENSMUSG00000052593	Adam17	ENSMUST00000127974	ENSMUSP00000136677	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	0	0	35.1	0	4,-2	-	-	-1	MINOR
ENSMUSG00000035597	Prpf39	ENSMUST00000220462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035597	Prpf39	ENSMUST00000129956	ENSMUSP00000114713	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035597	Prpf39	ENSMUST00000220729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035597	Prpf39	ENSMUST00000223341	ENSMUSP00000152756	TRANSLATION	nonsense_mediated_decay	start	-	5	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035597	Prpf39	ENSMUST00000220798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035597	Prpf39	ENSMUST00000221221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035597	Prpf39	ENSMUST00000120580	ENSMUSP00000112953	TRANSLATION	protein_coding	-	CCDS25939.2	2	665	0	3.66	2.7	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035597	Prpf39	ENSMUST00000222154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035597	Prpf39	ENSMUST00000223315	ENSMUSP00000152508	TRANSLATION	protein_coding	stop	-	3	208	0	0.74	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035597	Prpf39	ENSMUST00000223105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095130	Ighv1-39	ENSMUST00000103515	ENSMUSP00000100296	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	55.2	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000090395	Ighv5-8	ENSMUST00000166255	ENSMUSP00000128354	TRANSLATION	IG_LV_gene	start/stop	-	-	92	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000087582	Ighv6-7	ENSMUST00000193397	ENSMUSP00000141701	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.5	0	56.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094533	Ighv11-1	ENSMUST00000103466	ENSMUSP00000100247	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	49.9	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000020589	Fam49a	ENSMUST00000069005	ENSMUSP00000068125	TRANSLATION	protein_coding	-	CCDS25817.1	1	323	0	0	17.5	490.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020589	Fam49a	ENSMUST00000221782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020589	Fam49a	ENSMUST00000222357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020589	Fam49a	ENSMUST00000223061	ENSMUSP00000152252	TRANSLATION	protein_coding	-	CCDS25817.1	5	323	0	0	17.5	490.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000020589	Fam49a	ENSMUST00000069066	ENSMUSP00000065613	TRANSLATION	protein_coding	-	CCDS25817.1	1	323	0	0	17.5	490.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000002799	Jag2	ENSMUST00000221696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002799	Jag2	ENSMUST00000221454	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002799	Jag2	ENSMUST00000223140	ENSMUSP00000152342	TRANSLATION	protein_coding	start/stop	-	3	247	26	4.278	0	159.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002799	Jag2	ENSMUST00000220855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002799	Jag2	ENSMUST00000221647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002799	Jag2	ENSMUST00000222402	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002799	Jag2	ENSMUST00000220771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002799	Jag2	ENSMUST00000075827	ENSMUSP00000075224	TRANSLATION	protein_coding	-	CCDS26200.1	1	1247	55	14.3526	0.5	577.4	0	3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000002799	Jag2	ENSMUST00000223304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002799	Jag2	ENSMUST00000221320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000018851	ENSMUSP00000018851	TRANSLATION	protein_coding	-	CCDS36559.1	1	4644	62	57.415	1.5	2321.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018707	Dync1h1	ENSMUST00000107660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000166323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000172218	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000167395	ENSMUSP00000126117	TRANSLATION	protein_coding	start/stop	-	3	252	0	5	0	131.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018707	Dync1h1	ENSMUST00000171535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000166185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018707	Dync1h1	ENSMUST00000170024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020649	Rrm2	ENSMUST00000147789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020649	Rrm2	ENSMUST00000153058	ENSMUSP00000120893	TRANSLATION	protein_coding	stop	-	2	225	5	5.65	0	284.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000020649	Rrm2	ENSMUST00000020980	ENSMUSP00000020980	TRANSLATION	protein_coding	-	CCDS25844.1	1	390	7	10.83	5.1	426.5	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000020649	Rrm2	ENSMUST00000154588	ENSMUSP00000119502	TRANSLATION	protein_coding	start	-	5	243	6	6.33	0	287.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036295	Lrrn3	ENSMUST00000043884	ENSMUSP00000043818	TRANSLATION	protein_coding	-	CCDS25896.1	1	707	0	0.32	6.3	193.6	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042540	Acot5	ENSMUST00000046422	ENSMUSP00000042019	TRANSLATION	protein_coding	-	CCDS26037.1	1	421	4	6	1.5	428.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042540	Acot5	ENSMUST00000072505	ENSMUSP00000072322	TRANSLATION	protein_coding	-	CCDS83986.1	1	331	1	3	0.5	245.5	0	-4,-5	-	-	1	MINOR
ENSMUSG00000071235	Vrtn	ENSMUST00000222319	ENSMUSP00000152810	TRANSLATION	protein_coding	stop	-	3	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071235	Vrtn	ENSMUST00000167227	ENSMUSP00000132050	TRANSLATION	protein_coding	-	CCDS26048.1	3	740	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000071235	Vrtn	ENSMUST00000095551	ENSMUSP00000093207	TRANSLATION	protein_coding	-	CCDS26048.1	1	740	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000071235	Vrtn	ENSMUST00000221915	ENSMUSP00000152493	TRANSLATION	protein_coding	stop	-	3	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071235	Vrtn	ENSMUST00000166772	ENSMUSP00000128808	TRANSLATION	protein_coding	-	CCDS26048.1	3	740	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021000	Mia2	ENSMUST00000069430	ENSMUSP00000070572	TRANSLATION	protein_coding	-	CCDS36458.2	1	794	0	0	1.5	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000175912	ENSMUSP00000135251	TRANSLATION	protein_coding	-	-	5	785	0	0	0.5	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000219140	ENSMUSP00000151482	TRANSLATION	protein_coding	-	-	5	1397	0	1.58	0	39.5	1	2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000021000	Mia2	ENSMUST00000175803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021000	Mia2	ENSMUST00000176892	ENSMUSP00000135245	TRANSLATION	protein_coding	-	CCDS56840.1	1	761	0	0	1.5	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176464	ENSMUSP00000135390	TRANSLATION	protein_coding	-	-	5	796	0	0	0	0	1	-4,-2	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021000	Mia2	ENSMUST00000221093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021000	Mia2	ENSMUST00000176322	ENSMUSP00000135100	TRANSLATION	protein_coding	-	-	5	805	0	0	0.5	0	1	-4,-2	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176617	ENSMUSP00000135105	TRANSLATION	nonsense_mediated_decay	start	-	1	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176727	ENSMUSP00000135694	TRANSLATION	nonsense_mediated_decay	-	-	1	65	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000175837	ENSMUSP00000134828	TRANSLATION	nonsense_mediated_decay	start	-	5	147	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000177222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021000	Mia2	ENSMUST00000170992	ENSMUSP00000126538	TRANSLATION	protein_coding	-	CCDS49071.1	1	772	0	0	0.5	0	1	-4,-2	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176336	ENSMUSP00000134872	TRANSLATION	nonsense_mediated_decay	start	-	5	514	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000177225	ENSMUSP00000135618	TRANSLATION	protein_coding	-	-	5	725	0	0	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000177370	ENSMUSP00000135179	TRANSLATION	protein_coding	stop	-	3	185	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000176752	ENSMUSP00000134972	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000175685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021000	Mia2	ENSMUST00000175877	ENSMUSP00000135440	TRANSLATION	protein_coding	-	-	5	701	0	0	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000177162	ENSMUSP00000135001	TRANSLATION	protein_coding	-	-	5	753	0	0	0	0	1	-4,-2	-	-	0	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000177460	ENSMUSP00000134887	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000021000	Mia2	ENSMUST00000175659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021198	Unc79	ENSMUST00000179002	ENSMUSP00000136332	TRANSLATION	protein_coding	-	-	1	2654	0	0	3.6	598.9	0	-4,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000021198	Unc79	ENSMUST00000101099	ENSMUSP00000098659	TRANSLATION	protein_coding	-	CCDS49149.2	1	2596	0	0	1.7	598.9	0	-4,-5	-	-	6.269	PRINCIPAL:2
ENSMUSG00000021198	Unc79	ENSMUST00000178846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021198	Unc79	ENSMUST00000177984	ENSMUSP00000137320	TRANSLATION	protein_coding	start/stop	-	5	231	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021198	Unc79	ENSMUST00000178001	ENSMUSP00000137132	TRANSLATION	protein_coding	start/stop	-	5	188	0	0	0	125.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021198	Unc79	ENSMUST00000179039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021198	Unc79	ENSMUST00000085079	ENSMUSP00000082156	TRANSLATION	protein_coding	-	-	2	2458	0	0	1.2	519.1	0	-4,-6	-	-	1.289	MINOR
ENSMUSG00000021198	Unc79	ENSMUST00000178076	ENSMUSP00000136888	TRANSLATION	protein_coding	start	-	5	2461	0	0	0	494.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021198	Unc79	ENSMUST00000178467	ENSMUSP00000136293	TRANSLATION	nonsense_mediated_decay	start	-	5	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045679	Pqlc3	ENSMUST00000067572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045679	Pqlc3	ENSMUST00000134938	ENSMUSP00000152138	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000045679	Pqlc3	ENSMUST00000141232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045679	Pqlc3	ENSMUST00000140933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045679	Pqlc3	ENSMUST00000222203	ENSMUSP00000152715	TRANSLATION	protein_coding	-	-	5	120	0	0	3.9	32.9	0	1,-2	-	-	6.872	MINOR
ENSMUSG00000045679	Pqlc3	ENSMUST00000137960	ENSMUSP00000152643	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045679	Pqlc3	ENSMUST00000156360	ENSMUSP00000115895	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	0	1.2	32.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000045679	Pqlc3	ENSMUST00000054536	ENSMUSP00000054462	TRANSLATION	protein_coding	-	CCDS25824.1	1	202	0	0	14.3	32.9	0	1,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000090946	Ccdc71l	ENSMUST00000172332	ENSMUSP00000129581	TRANSLATION	protein_coding	-	CCDS49047.1	-	218	0	0	0.5	69.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079029	Gm5662	ENSMUST00000101168	ENSMUSP00000098728	TRANSLATION	protein_coding	-	CCDS49133.1	1	144	0	1	3	71.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000001225	Slc26a3	ENSMUST00000168209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001225	Slc26a3	ENSMUST00000171616	ENSMUSP00000128722	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001225	Slc26a3	ENSMUST00000001254	ENSMUSP00000001254	TRANSLATION	protein_coding	-	CCDS25863.1	1	757	0	4.16	2.7	506.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001225	Slc26a3	ENSMUST00000109275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001225	Slc26a3	ENSMUST00000167432	ENSMUSP00000130676	TRANSLATION	protein_coding	stop	-	3	235	0	1.45	0	149.4	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000001225	Slc26a3	ENSMUST00000165816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001225	Slc26a3	ENSMUST00000110854	ENSMUSP00000106478	TRANSLATION	nonsense_mediated_decay	-	-	2	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092233	Gm20403	ENSMUST00000173803	ENSMUSP00000134012	TRANSLATION	protein_coding	-	-	-	123	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000020591	Ntsr2	ENSMUST00000221596	ENSMUSP00000152110	TRANSLATION	protein_coding	stop	-	5	281	0	2.91	0	96.4	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000020591	Ntsr2	ENSMUST00000222957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020591	Ntsr2	ENSMUST00000220892	ENSMUSP00000152290	TRANSLATION	protein_coding	-	-	3	281	0	2.47	1.5	100.3	8	-4,-7	-	-	4.098	MINOR
ENSMUSG00000020591	Ntsr2	ENSMUST00000111064	ENSMUSP00000106693	TRANSLATION	protein_coding	-	CCDS36407.1	1	416	0	5.31	1.5	137.3	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020591	Ntsr2	ENSMUST00000221049	ENSMUSP00000152592	TRANSLATION	protein_coding	start	-	1	236	0	2.23	0	75	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000021109	Hif1a	ENSMUST00000110461	ENSMUSP00000106088	TRANSLATION	protein_coding	-	CCDS83968.1	1	810	0	8.95	0.5	234.8	0	-4,-5	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000021109	Hif1a	ENSMUST00000021530	ENSMUSP00000021530	TRANSLATION	protein_coding	-	CCDS25977.1	1	836	0	9.25	0.5	234.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000021109	Hif1a	ENSMUST00000110464	ENSMUSP00000106091	TRANSLATION	protein_coding	-	-	1	258	0	5.05	0	28.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021109	Hif1a	ENSMUST00000149740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021109	Hif1a	ENSMUST00000157041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021055	Esr2	ENSMUST00000110421	ENSMUSP00000106051	TRANSLATION	protein_coding	-	-	1	530	35	7.25	3.6	410.7	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000021055	Esr2	ENSMUST00000101291	ENSMUSP00000098849	TRANSLATION	protein_coding	-	-	1	548	35	7	0	409.8	0	-4,-5	-	-	17.448	MINOR
ENSMUSG00000021055	Esr2	ENSMUST00000133564	ENSMUSP00000138637	TRANSLATION	nonsense_mediated_decay	-	-	1	343	16	3.15	0	288.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021055	Esr2	ENSMUST00000076634	ENSMUSP00000075932	TRANSLATION	protein_coding	-	CCDS25987.1	1	549	35	7.25	1.7	410.7	0	-4,-5	-	-	18.269	PRINCIPAL:2
ENSMUSG00000021055	Esr2	ENSMUST00000218621	ENSMUSP00000151463	TRANSLATION	protein_coding	-	CCDS25988.1	1	567	35	7	1.5	409.8	0	-4,-5	-	-	17.64	MINOR
ENSMUSG00000096108	Ighv11-2	ENSMUST00000103468	ENSMUSP00000100249	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	50.3	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000042063	Zfp386	ENSMUST00000182883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042063	Zfp386	ENSMUST00000182566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042063	Zfp386	ENSMUST00000073551	ENSMUSP00000073241	TRANSLATION	protein_coding	-	CCDS59580.1	1	591	36	1.4	0.5	285.3	0	-4,-5	-	-	17.808	ALTERNATIVE:2
ENSMUSG00000042063	Zfp386	ENSMUST00000183125	ENSMUSP00000138305	TRANSLATION	protein_coding	-	CCDS26209.1	1	626	36	1.4	0.5	288.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000012609	Ttll5	ENSMUST00000177188	ENSMUSP00000134928	TRANSLATION	protein_coding	stop	-	5	176	1	1.8698	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000142411	ENSMUSP00000122530	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000177114	ENSMUSP00000135395	TRANSLATION	nonsense_mediated_decay	-	-	5	432	19	6.3898	0	311.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000095536	ENSMUSP00000093192	TRANSLATION	protein_coding	-	-	2	438	19	6.3898	0	311.8	0	-4,-5	-	-	16.56	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000176937	ENSMUSP00000135730	TRANSLATION	protein_coding	start/stop	-	5	408	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000177525	ENSMUSP00000135712	TRANSLATION	protein_coding	start	-	1	395	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000153570	ENSMUSP00000135139	TRANSLATION	nonsense_mediated_decay	-	-	3	91	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000176460	ENSMUSP00000135279	TRANSLATION	protein_coding	start/stop	-	5	301	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000175844	ENSMUSP00000134934	TRANSLATION	nonsense_mediated_decay	start	-	1	297	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000155448	ENSMUSP00000134971	TRANSLATION	nonsense_mediated_decay	-	-	2	563	19	7.1098	0.5	311.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000110224	ENSMUSP00000105853	TRANSLATION	protein_coding	-	-	5	1281	19	7.1098	0	311.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000012609	Ttll5	ENSMUST00000220906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012609	Ttll5	ENSMUST00000175899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012609	Ttll5	ENSMUST00000040179	ENSMUSP00000048809	TRANSLATION	protein_coding	-	CCDS36499.2	1	1328	19	7.1098	1.5	311.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000012609	Ttll5	ENSMUST00000176695	ENSMUSP00000135852	TRANSLATION	nonsense_mediated_decay	-	-	5	432	19	6.3898	0	311.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000040273	ENSMUSP00000039939	TRANSLATION	protein_coding	-	CCDS83991.1	5	1295	19	7.1098	0.5	311.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000012609	Ttll5	ENSMUST00000110220	ENSMUSP00000105849	TRANSLATION	protein_coding	-	-	1	348	14	5.0898	0	235.1	0	-4,-5	-	-	6.024	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000177168	ENSMUSP00000134874	TRANSLATION	protein_coding	start	-	1	795	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012609	Ttll5	ENSMUST00000124701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012609	Ttll5	ENSMUST00000176008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046791	Riox1	ENSMUST00000053744	ENSMUSP00000057984	TRANSLATION	protein_coding	-	CCDS26033.1	-	603	3	1	0.5	275.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000042523	Dnal1	ENSMUST00000140812	ENSMUSP00000121131	TRANSLATION	protein_coding	start	-	5	81	0	1.13	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042523	Dnal1	ENSMUST00000046340	ENSMUSP00000037076	TRANSLATION	protein_coding	-	CCDS83987.1	1	151	0	4.14	4.2	0	0	-4,-5	-	-	4.63	MINOR
ENSMUSG00000042523	Dnal1	ENSMUST00000143753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042523	Dnal1	ENSMUST00000123491	ENSMUSP00000121038	TRANSLATION	protein_coding	-	CCDS26039.2	2	190	0	5.39	12.3	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000042523	Dnal1	ENSMUST00000136159	ENSMUSP00000123497	TRANSLATION	protein_coding	-	-	5	103	0	3.21	0	0	0	-4,-5	-	-	1.638	MINOR
ENSMUSG00000042523	Dnal1	ENSMUST00000143711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042523	Dnal1	ENSMUST00000156138	ENSMUSP00000118584	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071234	Syndig1l	ENSMUST00000095550	ENSMUSP00000093206	TRANSLATION	protein_coding	-	CCDS26049.1	1	237	0	0	3.9	59.1	2	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000071234	Syndig1l	ENSMUST00000222422	ENSMUSP00000152374	TRANSLATION	protein_coding	-	CCDS26049.1	1	237	0	0	3.9	59.1	2	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000071234	Syndig1l	ENSMUST00000221905	ENSMUSP00000152304	TRANSLATION	protein_coding	stop	-	2	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071234	Syndig1l	ENSMUST00000221793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095127	Ighv1-82	ENSMUST00000103549	ENSMUSP00000100330	TRANSLATION	IG_V_gene	start/stop	-	-	98	8	1	0	58.6	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095127	Ighv1-82	ENSMUST00000196991	ENSMUSP00000142912	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	58.6	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076672	Ighv3-6	ENSMUST00000103481	ENSMUSP00000100262	TRANSLATION	IG_V_gene	stop	-	-	114	6	1.3	0	54.2	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076672	Ighv3-6	ENSMUST00000195124	ENSMUSP00000141343	TRANSLATION	IG_V_gene	stop	-	-	116	6	1.3	0	54.2	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000034402	Kcnh5	ENSMUST00000042299	ENSMUSP00000046864	TRANSLATION	protein_coding	-	CCDS25980.1	1	988	0	9.91	8.8	229.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000078984	Gm11027	ENSMUST00000090195	ENSMUSP00000087661	TRANSLATION	protein_coding	start/stop	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000073158	9030624G23Rik	ENSMUST00000101538	ENSMUSP00000099077	TRANSLATION	protein_coding	-	CCDS56833.1	1	155	2	1.6	0.5	73.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019256	Ahr	ENSMUST00000116436	ENSMUSP00000112137	TRANSLATION	protein_coding	-	CCDS36434.1	1	805	0	7.44	0.5	128	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000019256	Ahr	ENSMUST00000173414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019256	Ahr	ENSMUST00000110811	ENSMUSP00000106434	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	1	0	28.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020573	Pik3cg	ENSMUST00000085469	ENSMUSP00000082596	TRANSLATION	protein_coding	-	CCDS25870.1	1	1102	21	9.75	10.8	571.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020573	Pik3cg	ENSMUST00000156904	ENSMUSP00000123539	TRANSLATION	nonsense_mediated_decay	-	-	1	1102	21	9.75	10.8	571.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020573	Pik3cg	ENSMUST00000053215	ENSMUSP00000062864	TRANSLATION	protein_coding	-	CCDS25870.1	1	1102	21	9.75	10.8	571.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020573	Pik3cg	ENSMUST00000218848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020573	Pik3cg	ENSMUST00000217915	ENSMUSP00000152007	TRANSLATION	protein_coding	-	-	1	1024	21	8.948	0	544.3	0	-4,-5	-	-	14.772	MINOR
ENSMUSG00000020573	Pik3cg	ENSMUST00000126814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020573	Pik3cg	ENSMUST00000220366	ENSMUSP00000151400	TRANSLATION	protein_coding	-	CCDS25870.1	1	1102	21	9.75	10.8	571.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000096452	Ighv1-77	ENSMUST00000198777	ENSMUSP00000143684	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	55.1	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096452	Ighv1-77	ENSMUST00000170551	ENSMUSP00000126332	TRANSLATION	IG_V_gene	start/stop	-	-	98	9	1	0	55.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095595	Fam177a	ENSMUST00000177768	ENSMUSP00000137299	TRANSLATION	protein_coding	-	CCDS25913.1	1	207	0	0	1.5	154.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020583	Matn3	ENSMUST00000020899	ENSMUSP00000020899	TRANSLATION	protein_coding	-	CCDS25806.1	1	481	9	3.4	0.5	296.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021090	Lrrc9	ENSMUST00000160394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021090	Lrrc9	ENSMUST00000220791	ENSMUSP00000152689	TRANSLATION	protein_coding	start	-	5	294	0	4.61	0	41.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021090	Lrrc9	ENSMUST00000162159	ENSMUSP00000124394	TRANSLATION	protein_coding	-	CCDS49085.1	1	1456	2	13.48	1.5	99.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021090	Lrrc9	ENSMUST00000161547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021090	Lrrc9	ENSMUST00000161284	ENSMUSP00000124602	TRANSLATION	protein_coding	-	CCDS36472.2	1	1155	2	10.285	1.5	57.4	0	-4,-5	-	-	5.474	MINOR
ENSMUSG00000021090	Lrrc9	ENSMUST00000221282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021090	Lrrc9	ENSMUST00000221360	ENSMUSP00000152125	TRANSLATION	nonsense_mediated_decay	-	-	5	1324	2	12.2	0	99.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021090	Lrrc9	ENSMUST00000161195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021090	Lrrc9	ENSMUST00000162179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021090	Lrrc9	ENSMUST00000161957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054364	Rhob	ENSMUST00000067384	ENSMUSP00000067013	TRANSLATION	protein_coding	-	CCDS25799.1	-	196	25	1	15.7	192.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000096464	Ighv2-2	ENSMUST00000103443	ENSMUSP00000100224	TRANSLATION	IG_V_gene	stop	-	-	116	6	1	0	48.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000036655	Colec11	ENSMUST00000220655	ENSMUSP00000152207	TRANSLATION	nonsense_mediated_decay	-	-	5	91	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000036655	Colec11	ENSMUST00000220836	ENSMUSP00000152876	TRANSLATION	protein_coding	-	-	1	278	9	2.782	2.8	89.5	0	3,-2	-	-	18.819	MINOR
ENSMUSG00000036655	Colec11	ENSMUST00000036136	ENSMUSP00000049285	TRANSLATION	protein_coding	-	CCDS36426.1	1	272	9	2.65	7.6	89.5	0	3,-2	-	-	20.718	PRINCIPAL:1
ENSMUSG00000071454	Dtnb	ENSMUST00000173074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071454	Dtnb	ENSMUST00000174290	ENSMUSP00000133697	TRANSLATION	nonsense_mediated_decay	-	-	5	149	0	1.44	0	124.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000164578	ENSMUSP00000126194	TRANSLATION	protein_coding	-	CCDS49015.1	1	659	8	4.279	0.5	265	0	-4,-5	-	-	18	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000168806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071454	Dtnb	ENSMUST00000173199	ENSMUSP00000134392	TRANSLATION	protein_coding	-	-	5	609	8	4.279	8.8	265	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000071454	Dtnb	ENSMUST00000164607	ENSMUSP00000128230	TRANSLATION	nonsense_mediated_decay	-	-	1	608	8	4.279	0	265	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000174414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071454	Dtnb	ENSMUST00000173524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071454	Dtnb	ENSMUST00000172598	ENSMUSP00000134124	TRANSLATION	protein_coding	start	-	5	490	8	1.939	0	79.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000174547	ENSMUSP00000133927	TRANSLATION	protein_coding	-	-	5	596	8	4.279	1.2	265	0	-4,-5	-	-	18.078	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000174639	ENSMUSP00000133601	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	0.99	0	104.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000077930	ENSMUSP00000077085	TRANSLATION	protein_coding	-	CCDS36396.2	1	602	8	4.279	6.5	265	0	-4,-5	-	-	20.115	PRINCIPAL:2
ENSMUSG00000071454	Dtnb	ENSMUST00000173736	ENSMUSP00000134519	TRANSLATION	protein_coding	-	-	5	559	8	4.279	3.6	265	0	-4,-5	-	-	18.999	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000173998	ENSMUSP00000133774	TRANSLATION	protein_coding	stop	-	3	90	0	0	0	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000101637	ENSMUSP00000099161	TRANSLATION	nonsense_mediated_decay	-	-	1	615	8	4.279	0	265	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000173542	ENSMUSP00000134036	TRANSLATION	protein_coding	start	-	3	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000172735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071454	Dtnb	ENSMUST00000174663	ENSMUSP00000134146	TRANSLATION	protein_coding	-	-	5	626	8	4.279	7.3	265	0	-4,-5	-	-	20.424	ALTERNATIVE:1
ENSMUSG00000071454	Dtnb	ENSMUST00000173240	ENSMUSP00000133722	TRANSLATION	protein_coding	-	-	5	566	8	4.279	1.2	265	0	-4,-5	-	-	18.078	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000173498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071454	Dtnb	ENSMUST00000174479	ENSMUSP00000133702	TRANSLATION	protein_coding	-	-	1	265	0	3.279	0	231.3	0	-4,-5	-	-	7.98	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000172504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071454	Dtnb	ENSMUST00000174109	ENSMUSP00000134151	TRANSLATION	nonsense_mediated_decay	-	-	5	138	0	0.99	0	103.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000173483	ENSMUSP00000134390	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0.75	0	32.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071454	Dtnb	ENSMUST00000174293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103939	Ighv3-4	ENSMUST00000193408	ENSMUSP00000141962	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.3	0	55.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076733	Ighv8-13	ENSMUST00000164041	ENSMUSP00000129008	TRANSLATION	IG_V_gene	start/stop	-	-	99	3	1	0	53	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076733	Ighv8-13	ENSMUST00000103542	ENSMUSP00000100323	TRANSLATION	IG_V_gene	start/stop	-	-	101	3	1	0	53	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000045690	Wdr89	ENSMUST00000187307	ENSMUSP00000140172	TRANSLATION	protein_coding	-	CCDS49090.1	1	386	0	0.24	7.5	47.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045690	Wdr89	ENSMUST00000062370	ENSMUSP00000050532	TRANSLATION	protein_coding	-	CCDS49090.1	1	386	0	0.24	7.5	47.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093896	Ighv1-76	ENSMUST00000197537	ENSMUSP00000143144	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	59.7	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000093896	Ighv1-76	ENSMUST00000169155	ENSMUSP00000133037	TRANSLATION	IG_V_gene	start/stop	-	-	98	9	1	0	59.7	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000056458	Mok	ENSMUST00000177224	ENSMUSP00000135791	TRANSLATION	protein_coding	-	-	1	99	8	1.15	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056458	Mok	ENSMUST00000021701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056458	Mok	ENSMUST00000070565	ENSMUSP00000068904	TRANSLATION	protein_coding	-	CCDS49176.1	1	420	17	5.98	1.5	221.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056458	Mok	ENSMUST00000084974	ENSMUSP00000082041	TRANSLATION	protein_coding	-	-	1	236	4	2.3	0	119.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000046314	Stxbp6	ENSMUST00000139750	ENSMUSP00000119307	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046314	Stxbp6	ENSMUST00000218249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046314	Stxbp6	ENSMUST00000130202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046314	Stxbp6	ENSMUST00000053768	ENSMUSP00000052639	TRANSLATION	protein_coding	-	CCDS25898.1	5	210	0	0.998	19.5	111.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000046314	Stxbp6	ENSMUST00000143376	ENSMUSP00000117366	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	39.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046314	Stxbp6	ENSMUST00000120531	ENSMUSP00000112551	TRANSLATION	protein_coding	-	CCDS25898.1	1	210	0	0.998	19.5	111.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000112449	Srp54b	ENSMUST00000110708	ENSMUSP00000106336	TRANSLATION	protein_coding	-	CCDS49065.1	1	504	11	13.08	19.5	439.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000112449	Srp54b	ENSMUST00000217670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000112449	Srp54b	ENSMUST00000218889	ENSMUSP00000151868	TRANSLATION	protein_coding	start	-	3	89	0	2.349	0	74.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112449	Srp54b	ENSMUST00000218128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056987	Fam71d	ENSMUST00000220396	ENSMUSP00000151336	TRANSLATION	protein_coding	stop	-	5	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056987	Fam71d	ENSMUST00000219551	ENSMUSP00000151845	TRANSLATION	protein_coding	-	-	1	393	0	0	0.5	78.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000056987	Fam71d	ENSMUST00000077968	ENSMUSP00000077119	TRANSLATION	protein_coding	-	CCDS49096.1	1	440	0	0	0.5	78.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000056987	Fam71d	ENSMUST00000220101	ENSMUSP00000151673	TRANSLATION	nonsense_mediated_decay	start	-	3	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056987	Fam71d	ENSMUST00000218697	ENSMUSP00000151640	TRANSLATION	protein_coding	stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056987	Fam71d	ENSMUST00000219572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056987	Fam71d	ENSMUST00000219507	ENSMUSP00000151719	TRANSLATION	protein_coding	start	-	2	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056987	Fam71d	ENSMUST00000219314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056987	Fam71d	ENSMUST00000220212	ENSMUSP00000151962	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095571	Ighv5-17	ENSMUST00000103459	ENSMUSP00000100240	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	49.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000058260	Serpina9	ENSMUST00000058464	ENSMUSP00000058535	TRANSLATION	protein_coding	-	CCDS26144.1	1	418	0	4.33	1.5	383.4	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000058260	Serpina9	ENSMUST00000164023	ENSMUSP00000130064	TRANSLATION	protein_coding	stop	-	3	205	0	1	0	151	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000037638	Zbtb42	ENSMUST00000174780	ENSMUSP00000134028	TRANSLATION	protein_coding	-	-	2	60	0	0.8	0	20.9	0	-4,-5	-	-	2.106	MINOR
ENSMUSG00000037638	Zbtb42	ENSMUST00000173942	ENSMUSP00000133987	TRANSLATION	protein_coding	stop	-	3	110	0	0.8	0	20.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037638	Zbtb42	ENSMUST00000169593	ENSMUSP00000133152	TRANSLATION	protein_coding	-	CCDS49190.1	2	420	15	2.28	1.5	145.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050103	Agmo	ENSMUST00000221949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050103	Agmo	ENSMUST00000160158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050103	Agmo	ENSMUST00000160390	ENSMUSP00000125639	TRANSLATION	protein_coding	-	-	1	435	0	0	0	94.3	6	-4,-7	-	-	6	MINOR
ENSMUSG00000050103	Agmo	ENSMUST00000159998	ENSMUSP00000123801	TRANSLATION	nonsense_mediated_decay	-	-	1	433	0	0	0	94.3	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000050103	Agmo	ENSMUST00000049874	ENSMUSP00000051441	TRANSLATION	protein_coding	-	CCDS49052.1	1	447	0	0	7.5	94.3	7	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000050103	Agmo	ENSMUST00000160768	ENSMUSP00000124044	TRANSLATION	protein_coding	-	-	1	114	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000096078	Ighv1-62-2	ENSMUST00000194581	ENSMUSP00000142208	TRANSLATION	IG_V_gene	stop	-	-	119	8	1.5	0	58.4	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096078	Ighv1-62-2	ENSMUST00000163467	ENSMUSP00000129665	TRANSLATION	IG_V_gene	start/stop	-	-	100	8	1	0	58.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000033713	Foxn3	ENSMUST00000176928	ENSMUSP00000135749	TRANSLATION	protein_coding	stop	-	2	186	0	0.6	0	101.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033713	Foxn3	ENSMUST00000177451	ENSMUSP00000135082	TRANSLATION	protein_coding	-	CCDS26103.1	1	457	0	1.29	1.5	116.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033713	Foxn3	ENSMUST00000177287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033713	Foxn3	ENSMUST00000221283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033713	Foxn3	ENSMUST00000222918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033713	Foxn3	ENSMUST00000176311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033713	Foxn3	ENSMUST00000222458	ENSMUSP00000152082	TRANSLATION	nonsense_mediated_decay	start	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033713	Foxn3	ENSMUST00000046859	ENSMUSP00000036035	TRANSLATION	protein_coding	-	CCDS26103.1	1	457	0	1.29	1.5	116.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033713	Foxn3	ENSMUST00000176829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033713	Foxn3	ENSMUST00000176959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033713	Foxn3	ENSMUST00000177269	ENSMUSP00000135814	TRANSLATION	protein_coding	stop	-	5	191	0	0.93	0	110.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033713	Foxn3	ENSMUST00000223484	ENSMUSP00000152328	TRANSLATION	protein_coding	stop	-	5	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033713	Foxn3	ENSMUST00000085108	ENSMUSP00000082189	TRANSLATION	protein_coding	-	CCDS26103.1	5	457	0	1.29	1.5	116.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033713	Foxn3	ENSMUST00000222261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052221	Ppp1r36	ENSMUST00000063977	ENSMUSP00000069849	TRANSLATION	protein_coding	-	CCDS49093.1	5	411	0	0	1.5	352	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000052221	Ppp1r36	ENSMUST00000219251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052221	Ppp1r36	ENSMUST00000218732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052221	Ppp1r36	ENSMUST00000220187	ENSMUSP00000152006	TRANSLATION	protein_coding	-	-	3	150	0	0	0	74.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218551	ENSMUSP00000151779	TRANSLATION	nonsense_mediated_decay	-	-	5	391	0	0	0	113	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000118657	ENSMUSP00000112694	TRANSLATION	protein_coding	-	CCDS79106.1	1	555	4	0	0.5	344.6	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000020622	Nt5c1b	ENSMUST00000219826	ENSMUSP00000151401	TRANSLATION	protein_coding	-	-	5	631	4	0	0.5	344.6	0	-4,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000020622	Nt5c1b	ENSMUST00000219630	ENSMUSP00000151584	TRANSLATION	protein_coding	start	-	5	430	2	0	0	167	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000002456	ENSMUSP00000002456	TRANSLATION	protein_coding	-	CCDS25810.1	1	573	4	0	0.5	344.6	0	-4,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218327	ENSMUSP00000151288	TRANSLATION	nonsense_mediated_decay	-	-	5	302	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000143739	ENSMUSP00000123105	TRANSLATION	protein_coding	-	-	2	271	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000220611	ENSMUSP00000152344	TRANSLATION	nonsense_mediated_decay	-	-	5	452	2	0	0	192.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000219292	ENSMUSP00000151376	TRANSLATION	nonsense_mediated_decay	-	-	5	320	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218287	ENSMUSP00000151984	TRANSLATION	nonsense_mediated_decay	-	-	5	378	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218339	ENSMUSP00000151618	TRANSLATION	protein_coding	-	-	5	571	4	0	1.5	344.6	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000020622	Nt5c1b	ENSMUST00000223534	ENSMUSP00000152838	TRANSLATION	protein_coding	-	-	5	557	4	0	0.5	344.6	0	-4,-5	-	-	10	ALTERNATIVE:2
ENSMUSG00000020622	Nt5c1b	ENSMUST00000217944	ENSMUSP00000151734	TRANSLATION	protein_coding	-	-	5	615	4	0	0.5	344.6	0	-4,-6	-	-	10	ALTERNATIVE:2
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218288	ENSMUSP00000151785	TRANSLATION	protein_coding	start	-	5	495	4	0	0	344.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218026	ENSMUSP00000151761	TRANSLATION	nonsense_mediated_decay	-	-	5	280	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020622	Nt5c1b	ENSMUST00000218417	ENSMUSP00000151433	TRANSLATION	nonsense_mediated_decay	-	-	5	362	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000219049	ENSMUSP00000151771	TRANSLATION	nonsense_mediated_decay	-	-	5	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000220257	ENSMUSP00000151627	TRANSLATION	nonsense_mediated_decay	-	-	5	382	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020622	Nt5c1b	ENSMUST00000147323	ENSMUSP00000117869	TRANSLATION	nonsense_mediated_decay	-	-	1	474	2	0	0	192.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035293	G2e3	ENSMUST00000152236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035293	G2e3	ENSMUST00000119211	ENSMUSP00000113270	TRANSLATION	protein_coding	-	CCDS49061.1	1	739	16	4.74	0.5	109.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000035293	G2e3	ENSMUST00000054308	ENSMUSP00000054474	TRANSLATION	protein_coding	-	CCDS25900.1	1	716	16	4.74	1.5	109.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000035293	G2e3	ENSMUST00000121521	ENSMUSP00000113191	TRANSLATION	protein_coding	-	CCDS49062.1	1	622	16	4.58	0.5	109.3	0	-4,-5	-	-	17.652	ALTERNATIVE:2
ENSMUSG00000035293	G2e3	ENSMUST00000144767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021182	Ccdc88c	ENSMUST00000068411	ENSMUSP00000068629	TRANSLATION	protein_coding	-	CCDS26110.1	1	2009	0	3.1	0.5	132	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000021182	Ccdc88c	ENSMUST00000222204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021182	Ccdc88c	ENSMUST00000233416	ENSMUSP00000156712	TRANSLATION	protein_coding	start	-	-	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021182	Ccdc88c	ENSMUST00000085096	ENSMUSP00000082177	TRANSLATION	protein_coding	-	-	5	2016	0	3.1	0	130.7	0	-4,-6	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000021182	Ccdc88c	ENSMUST00000223097	ENSMUSP00000152163	TRANSLATION	protein_coding	-	-	1	172	0	3.1	0	90	0	-4,-6	-	-	9.48	MINOR
ENSMUSG00000021182	Ccdc88c	ENSMUST00000223416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021182	Ccdc88c	ENSMUST00000223509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021182	Ccdc88c	ENSMUST00000223235	ENSMUSP00000152316	TRANSLATION	protein_coding	start/stop	-	5	235	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000160027	ENSMUSP00000125548	TRANSLATION	protein_coding	-	CCDS25961.1	1	255	0	7.49	12.8	231.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060073	Psma3	ENSMUST00000162898	ENSMUSP00000125490	TRANSLATION	protein_coding	start	-	5	55	0	1.5	0	36.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000162851	ENSMUSP00000124082	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	1.08	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000161041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060073	Psma3	ENSMUST00000162626	ENSMUSP00000125739	TRANSLATION	nonsense_mediated_decay	-	-	1	35	0	1.08	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000160864	ENSMUSP00000124894	TRANSLATION	protein_coding	-	CCDS79119.1	5	180	0	5.41	1.5	123	0	-4,-5	-	-	2.01	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000071704	ENSMUSP00000071624	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	1.08	0	56.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060073	Psma3	ENSMUST00000160683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060073	Psma3	ENSMUST00000163035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094194	Ighv5-16	ENSMUST00000193652	ENSMUSP00000141639	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	44.1	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094194	Ighv5-16	ENSMUST00000103458	ENSMUSP00000100239	TRANSLATION	IG_V_gene	stop	-	-	116	6	1.5	0	44.1	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000035799	Twist1	ENSMUST00000049089	ENSMUSP00000040089	TRANSLATION	protein_coding	-	CCDS25879.1	1	206	0	0.4	0.5	62.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021175	Cdca7l	ENSMUST00000176499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021175	Cdca7l	ENSMUST00000021592	ENSMUSP00000021592	TRANSLATION	protein_coding	-	CCDS49197.1	1	438	7	0	1.5	128	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021175	Cdca7l	ENSMUST00000176735	ENSMUSP00000135142	TRANSLATION	protein_coding	stop	-	5	226	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021175	Cdca7l	ENSMUST00000177339	ENSMUSP00000135053	TRANSLATION	protein_coding	stop	-	5	308	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079012	Serpina3m	ENSMUST00000168797	ENSMUSP00000130979	TRANSLATION	protein_coding	-	CCDS36538.1	1	418	0	4	0.5	410.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079012	Serpina3m	ENSMUST00000101078	ENSMUSP00000098639	TRANSLATION	protein_coding	-	CCDS36538.1	1	418	0	4	0.5	410.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000004791	Pgf	ENSMUST00000004913	ENSMUSP00000004913	TRANSLATION	protein_coding	-	CCDS49115.1	1	158	0	2.43	1.5	88.4	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000004791	Pgf	ENSMUST00000223220	ENSMUSP00000152165	TRANSLATION	protein_coding	-	-	1	162	0	2.43	0	88.4	0	0,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000004791	Pgf	ENSMUST00000222850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004791	Pgf	ENSMUST00000220985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041550	Serpina5	ENSMUST00000021495	ENSMUSP00000021495	TRANSLATION	protein_coding	-	CCDS26146.1	1	405	0	4	0.5	363.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020988	L2hgdh	ENSMUST00000223387	ENSMUSP00000152394	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020988	L2hgdh	ENSMUST00000222972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020988	L2hgdh	ENSMUST00000021370	ENSMUSP00000021370	TRANSLATION	protein_coding	-	CCDS25953.1	1	464	39	4.2124	6.5	233.6	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000021140	Pcnx	ENSMUST00000221721	ENSMUSP00000152104	TRANSLATION	protein_coding	-	-	5	2338	0	0	1.5	389.9	6	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021140	Pcnx	ENSMUST00000021567	ENSMUSP00000021567	TRANSLATION	protein_coding	-	CCDS26025.1	2	2344	0	0	1.5	389.9	6	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000021140	Pcnx	ENSMUST00000221675	ENSMUSP00000152385	TRANSLATION	protein_coding	start	-	1	1473	0	0	0	389.9	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000021140	Pcnx	ENSMUST00000222908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021140	Pcnx	ENSMUST00000222828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021140	Pcnx	ENSMUST00000222005	ENSMUSP00000152302	TRANSLATION	nonsense_mediated_decay	-	-	5	818	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000021140	Pcnx	ENSMUST00000221472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021140	Pcnx	ENSMUST00000222468	ENSMUSP00000152168	TRANSLATION	nonsense_mediated_decay	start	-	3	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036095	Dgkb	ENSMUST00000221540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036095	Dgkb	ENSMUST00000222337	ENSMUSP00000152460	TRANSLATION	protein_coding	stop	-	5	23	0	0	0	23.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036095	Dgkb	ENSMUST00000220606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036095	Dgkb	ENSMUST00000221176	ENSMUSP00000152446	TRANSLATION	protein_coding	-	-	1	282	9	5.1	0	203.2	0	-4,-5	-	-	10.458	MINOR
ENSMUSG00000036095	Dgkb	ENSMUST00000220990	ENSMUSP00000152378	TRANSLATION	protein_coding	-	CCDS25889.1	1	795	9	5.87	7.5	562.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036095	Dgkb	ENSMUST00000040500	ENSMUSP00000037900	TRANSLATION	protein_coding	-	CCDS25889.1	1	795	9	5.87	7.5	562.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036095	Dgkb	ENSMUST00000221098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036095	Dgkb	ENSMUST00000221686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054013	Tmem179	ENSMUST00000222836	ENSMUSP00000152792	TRANSLATION	protein_coding	-	-	5	100	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000054013	Tmem179	ENSMUST00000066791	ENSMUSP00000068004	TRANSLATION	protein_coding	-	CCDS36570.1	1	233	0	0	9.1	0	5	-1,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000095442	Ighv1-4	ENSMUST00000103493	ENSMUSP00000100274	TRANSLATION	IG_V_gene	stop	-	-	117	11	1.5	0	58	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000095117	Ighv8-9	ENSMUST00000103533	ENSMUSP00000100314	TRANSLATION	IG_V_gene	start/stop	-	-	100	3	1	0	44.6	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095117	Ighv8-9	ENSMUST00000197803	ENSMUSP00000142895	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.2	0	44.6	0	2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000036257	Pnpla8	ENSMUST00000143771	ENSMUSP00000122560	TRANSLATION	protein_coding	-	-	5	711	0	0	0	55	0	-4,-6	-	-	3.744	MINOR
ENSMUSG00000036257	Pnpla8	ENSMUST00000122902	ENSMUSP00000120877	TRANSLATION	protein_coding	-	-	1	558	0	0	0	88.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036257	Pnpla8	ENSMUST00000218954	ENSMUSP00000151660	TRANSLATION	protein_coding	stop	-	2	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036257	Pnpla8	ENSMUST00000125757	ENSMUSP00000117126	TRANSLATION	protein_coding	stop	-	2	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036257	Pnpla8	ENSMUST00000156082	ENSMUSP00000116922	TRANSLATION	protein_coding	start	-	1	137	0	0	0	29.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036257	Pnpla8	ENSMUST00000043082	ENSMUSP00000043286	TRANSLATION	protein_coding	-	CCDS36436.1	1	776	0	0	0.5	88.1	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036257	Pnpla8	ENSMUST00000218803	ENSMUSP00000151351	TRANSLATION	protein_coding	start	-	3	160	0	0	0	37.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021190	Lgmn	ENSMUST00000021607	ENSMUSP00000021607	TRANSLATION	protein_coding	-	CCDS26119.1	1	435	3	11	7.5	387.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021190	Lgmn	ENSMUST00000110020	ENSMUSP00000105647	TRANSLATION	protein_coding	-	CCDS26119.1	1	435	3	11	7.5	387.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021190	Lgmn	ENSMUST00000146499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000113149	Gm49383	ENSMUST00000223192	ENSMUSP00000152161	TRANSLATION	protein_coding,RT	start	-	1	259	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000060121	Gemin2	ENSMUST00000182710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060121	Gemin2	ENSMUST00000182188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060121	Gemin2	ENSMUST00000021379	ENSMUSP00000021379	TRANSLATION	protein_coding	-	CCDS36457.1	1	269	0	8	2.7	263.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095170	Ighv8-11	ENSMUST00000103536	ENSMUSP00000100317	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.2	0	48.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000033530	Ttc7b	ENSMUST00000220614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033530	Ttc7b	ENSMUST00000222036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033530	Ttc7b	ENSMUST00000223255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033530	Ttc7b	ENSMUST00000223110	ENSMUSP00000152637	TRANSLATION	protein_coding	start	-	5	329	0	4.6	0	91.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033530	Ttc7b	ENSMUST00000062957	ENSMUSP00000052107	TRANSLATION	protein_coding	-	CCDS49141.1	1	843	0	18.5	12.8	138	0	-4,-6	-	-	15.802	PRINCIPAL:1
ENSMUSG00000033530	Ttc7b	ENSMUST00000221975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033530	Ttc7b	ENSMUST00000223514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033530	Ttc7b	ENSMUST00000223444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033530	Ttc7b	ENSMUST00000220480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033530	Ttc7b	ENSMUST00000223020	ENSMUSP00000152299	TRANSLATION	protein_coding	-	-	5	860	0	18.6	6.6	138	0	-4,-6	-	-	13.9	MINOR
ENSMUSG00000076632	Gm16968	ENSMUST00000103441	ENSMUSP00000141206	TRANSLATION	IG_D_gene	start/stop	-	-	7	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072812	Ahnak2	ENSMUST00000137195	ENSMUSP00000116582	TRANSLATION	protein_coding	start/stop	-	-	1126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072812	Ahnak2	ENSMUST00000128258	ENSMUSP00000122404	TRANSLATION	protein_coding	start	-	-	1576	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000072812	Ahnak2	ENSMUST00000101010	ENSMUSP00000098572	TRANSLATION	protein_coding	-	-	-	770	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000072812	Ahnak2	ENSMUST00000124526	ENSMUSP00000114522	TRANSLATION	protein_coding	stop	-	1	1738	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063632	Sox11	ENSMUST00000079063	ENSMUSP00000078070	TRANSLATION	protein_coding	-	CCDS25849.1	-	395	0	0.4	1.5	90.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021023	Prorp	ENSMUST00000183654	ENSMUSP00000138821	TRANSLATION	protein_coding	-	-	1	215	2	4.5	2.4	300.9	0	-4,-5	-	-	7.208	MINOR
ENSMUSG00000021023	Prorp	ENSMUST00000184766	ENSMUSP00000139204	TRANSLATION	protein_coding	-	CCDS49068.1	5	584	4	6.55	1.5	345.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021023	Prorp	ENSMUST00000184980	ENSMUSP00000139123	TRANSLATION	protein_coding	-	-	5	271	4	5.75	0	345.8	0	-4,-5	-	-	14.398	MINOR
ENSMUSG00000021023	Prorp	ENSMUST00000184249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021023	Prorp	ENSMUST00000021411	ENSMUSP00000021411	TRANSLATION	protein_coding	-	CCDS49068.1	1	584	4	6.55	1.5	345.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021023	Prorp	ENSMUST00000183475	ENSMUSP00000139252	TRANSLATION	protein_coding	-	-	5	568	4	6.05	0	340.1	0	-4,-7	-	-	14.656	MINOR
ENSMUSG00000007867	Ift43	ENSMUST00000221194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007867	Ift43	ENSMUST00000054565	ENSMUSP00000061891	TRANSLATION	protein_coding	-	CCDS26064.1	1	195	0	0	0.5	165.8	0	-4,-5	-	-	5.814	MINOR
ENSMUSG00000007867	Ift43	ENSMUST00000222905	ENSMUSP00000152281	TRANSLATION	protein_coding	stop	-	3	143	0	0	0	125.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000007867	Ift43	ENSMUST00000221161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007867	Ift43	ENSMUST00000222821	ENSMUSP00000152079	TRANSLATION	protein_coding	-	-	1	206	0	0	1.7	168.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000007867	Ift43	ENSMUST00000223269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007867	Ift43	ENSMUST00000220711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095717	Gm2056	ENSMUST00000178852	ENSMUSP00000137563	TRANSLATION	protein_coding	-	-	-	144	0	1	3	65.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021123	Rdh12	ENSMUST00000021548	ENSMUSP00000021548	TRANSLATION	protein_coding	-	CCDS26009.1	1	316	30	4.73	8.8	122.1	0	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000021123	Rdh12	ENSMUST00000140823	ENSMUSP00000118851	TRANSLATION	protein_coding	stop	-	3	136	16	3.28	0	74.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021123	Rdh12	ENSMUST00000122227	ENSMUSP00000112543	TRANSLATION	protein_coding	-	CCDS83971.1	1	304	29	4.23	0.5	85.6	0	2,-2	-	-	14.142	MINOR
ENSMUSG00000021123	Rdh12	ENSMUST00000151980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041481	Serpina3g	ENSMUST00000170628	ENSMUSP00000126548	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041481	Serpina3g	ENSMUST00000043315	ENSMUSP00000041250	TRANSLATION	protein_coding	-	-	1	248	0	3.33	0	230.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041481	Serpina3g	ENSMUST00000171065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041481	Serpina3g	ENSMUST00000171916	ENSMUSP00000129633	TRANSLATION	protein_coding	stop	-	3	100	0	1.33	0	105.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058070	Eml1	ENSMUST00000130999	ENSMUSP00000118325	TRANSLATION	nonsense_mediated_decay	-	-	2	699	0	14.31	0	157.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058070	Eml1	ENSMUST00000155544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058070	Eml1	ENSMUST00000109857	ENSMUSP00000105483	TRANSLATION	protein_coding	-	CCDS70420.1	1	800	0	17.48	2.9	197.5	0	-4,-5	-	-	11.613	MINOR
ENSMUSG00000058070	Eml1	ENSMUST00000109860	ENSMUSP00000105486	TRANSLATION	protein_coding	-	CCDS36555.1	1	814	0	18.06	8.4	197.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058070	Eml1	ENSMUST00000138456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058070	Eml1	ENSMUST00000148186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058070	Eml1	ENSMUST00000123035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058070	Eml1	ENSMUST00000054955	ENSMUSP00000057209	TRANSLATION	protein_coding	-	CCDS36556.1	1	783	0	17.73	4.7	197.5	0	-4,-5	-	-	12.84	MINOR
ENSMUSG00000071342	Lsmem1	ENSMUST00000220951	ENSMUSP00000152529	TRANSLATION	protein_coding	-	-	1	85	0	0	0	79.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000071342	Lsmem1	ENSMUST00000095760	ENSMUSP00000093434	TRANSLATION	protein_coding	-	CCDS25892.1	1	128	0	0	3.9	233.4	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000020990	Cdkl1	ENSMUST00000221646	ENSMUSP00000152086	TRANSLATION	protein_coding	stop	-	2	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020990	Cdkl1	ENSMUST00000021377	ENSMUSP00000021377	TRANSLATION	protein_coding	-	CCDS25955.1	1	352	18	7	3.9	279.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000035472	Slc25a21	ENSMUST00000044634	ENSMUSP00000039289	TRANSLATION	protein_coding	-	CCDS25925.1	1	298	0	4.205	1.5	196.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035472	Slc25a21	ENSMUST00000160709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035472	Slc25a21	ENSMUST00000110680	ENSMUSP00000106308	TRANSLATION	protein_coding	-	CCDS49069.1	5	305	0	3.905	0.5	184.9	0	-4,-5	-	-	10.716	MINOR
ENSMUSG00000035472	Slc25a21	ENSMUST00000160892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035472	Slc25a21	ENSMUST00000217690	ENSMUSP00000151751	TRANSLATION	protein_coding	-	CCDS49069.1	1	305	0	3.905	0.5	184.9	0	-4,-5	-	-	10.716	MINOR
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000134967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000155242	ENSMUSP00000118189	TRANSLATION	protein_coding	stop	-	3	201	13	3.75	0	56.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000129005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000145255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000149189	ENSMUSP00000114201	TRANSLATION	protein_coding	stop	-	2	98	5	2	0	24.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000021698	ENSMUSP00000021698	TRANSLATION	protein_coding	-	CCDS26172.1	5	733	14	11.05	7.6	860.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000094361	ENSMUSP00000091921	TRANSLATION	protein_coding	-	CCDS26172.1	1	733	14	11.05	7.6	860.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021270	Hsp90aa1	ENSMUST00000124156	ENSMUSP00000121138	TRANSLATION	protein_coding	stop	-	2	103	5	2	0	30.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021076	Actr10	ENSMUST00000220770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021076	Actr10	ENSMUST00000221583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021076	Actr10	ENSMUST00000220582	ENSMUSP00000152759	TRANSLATION	nonsense_mediated_decay	-	-	2	43	2	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021076	Actr10	ENSMUST00000221165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021076	Actr10	ENSMUST00000021479	ENSMUSP00000021479	TRANSLATION	protein_coding	-	CCDS25960.1	1	417	19	10.91	17	161.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021076	Actr10	ENSMUST00000222291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021076	Actr10	ENSMUST00000223549	ENSMUSP00000152334	TRANSLATION	protein_coding	stop	-	3	145	5	4.08	0	59.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021076	Actr10	ENSMUST00000220452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020674	Pxdn	ENSMUST00000155190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020674	Pxdn	ENSMUST00000218620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020674	Pxdn	ENSMUST00000155318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020674	Pxdn	ENSMUST00000126233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020674	Pxdn	ENSMUST00000137316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020674	Pxdn	ENSMUST00000118321	ENSMUSP00000113477	TRANSLATION	protein_coding	-	-	1	307	0	6.2	0	132.3	0	2,-3	-	-	0	MINOR
ENSMUSG00000020674	Pxdn	ENSMUST00000122328	ENSMUSP00000113703	TRANSLATION	protein_coding	-	CCDS25856.1	1	1475	26	14.994	1.5	1030.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000020674	Pxdn	ENSMUST00000220271	ENSMUSP00000151320	TRANSLATION	protein_coding	-	-	5	1295	26	10.644	0	967.3	0	-4,-6	-	-	8.202	MINOR
ENSMUSG00000020955	Ap4s1	ENSMUST00000021338	ENSMUSP00000021338	TRANSLATION	protein_coding	-	CCDS36441.1	1	144	0	3.15	17.3	149	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020955	Ap4s1	ENSMUST00000218820	ENSMUSP00000151472	TRANSLATION	protein_coding	stop	-	5	134	0	2.15	0	107	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096619	Gm2035	ENSMUST00000180053	ENSMUSP00000137146	TRANSLATION	protein_coding	-	-	-	144	0	1	3	66	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000006356	Crip2	ENSMUST00000200380	ENSMUSP00000143334	TRANSLATION	protein_coding	-	CCDS84005.1	3	84	9	2.25	4	57	0	-4,-7	-	-	8.106	MINOR
ENSMUSG00000006356	Crip2	ENSMUST00000196015	ENSMUSP00000143009	TRANSLATION	protein_coding	-	CCDS84005.1	3	84	9	2.25	4	57	0	-4,-7	-	-	8.106	MINOR
ENSMUSG00000006356	Crip2	ENSMUST00000199976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006356	Crip2	ENSMUST00000197396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006356	Crip2	ENSMUST00000084882	ENSMUSP00000081943	TRANSLATION	protein_coding	-	CCDS26204.1	1	208	16	3.882	10.8	105	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000006356	Crip2	ENSMUST00000200177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021047	Nova1	ENSMUST00000220258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021047	Nova1	ENSMUST00000218829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021047	Nova1	ENSMUST00000021438	ENSMUSP00000021438	TRANSLATION	protein_coding	-	CCDS49058.1	1	507	0	3.28	12.3	159.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021047	Nova1	ENSMUST00000219330	ENSMUSP00000151364	TRANSLATION	protein_coding	start	-	3	112	0	1.93	0	22	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021047	Nova1	ENSMUST00000219886	ENSMUSP00000151337	TRANSLATION	protein_coding	start	-	5	66	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095589	Ighv1-55	ENSMUST00000103526	ENSMUSP00000100307	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	59.4	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094102	Ighv9-2	ENSMUST00000103472	ENSMUSP00000100253	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	49.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000020576	Nbas	ENSMUST00000221212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020576	Nbas	ENSMUST00000223424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020576	Nbas	ENSMUST00000223081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020576	Nbas	ENSMUST00000042953	ENSMUSP00000036082	TRANSLATION	protein_coding	-	CCDS49031.1	5	2356	0	0	1.5	662.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020576	Nbas	ENSMUST00000221714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041415	Dicer1	ENSMUST00000221293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041415	Dicer1	ENSMUST00000222528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041415	Dicer1	ENSMUST00000222115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041415	Dicer1	ENSMUST00000041987	ENSMUSP00000043676	TRANSLATION	protein_coding	-	CCDS36539.1	1	1906	15	18.28	0.5	556.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000041415	Dicer1	ENSMUST00000222519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041415	Dicer1	ENSMUST00000222002	ENSMUSP00000152413	TRANSLATION	protein_coding	stop	-	1	411	12	4.74	0	44.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034126	Pomt2	ENSMUST00000037788	ENSMUSP00000035260	TRANSLATION	protein_coding	-	CCDS26070.1	1	820	0	2.87	1.5	563.2	10	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000034126	Pomt2	ENSMUST00000222634	ENSMUSP00000152370	TRANSLATION	nonsense_mediated_decay	-	-	2	603	0	2.87	0	429.4	6	-4,-1	-	-	-1	MINOR
ENSMUSG00000034126	Pomt2	ENSMUST00000221252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034126	Pomt2	ENSMUST00000222147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006360	Crip1	ENSMUST00000200553	ENSMUSP00000143680	TRANSLATION	protein_coding	-	CCDS26205.1	2	77	9	2.75	21.5	57.2	0	-4,-5	-	-	21.862	PRINCIPAL:1
ENSMUSG00000006360	Crip1	ENSMUST00000198597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006360	Crip1	ENSMUST00000199089	ENSMUSP00000142803	TRANSLATION	protein_coding	-	-	3	128	9	2.816	0	57.2	0	-4,-5	-	-	18	MINOR
ENSMUSG00000006360	Crip1	ENSMUST00000006523	ENSMUSP00000006523	TRANSLATION	protein_coding	-	CCDS26205.1	1	77	9	2.75	21.5	57.2	0	-4,-5	-	-	21.862	PRINCIPAL:1
ENSMUSG00000006360	Crip1	ENSMUST00000196932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006360	Crip1	ENSMUST00000198909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066366	Serpina1a	ENSMUST00000085056	ENSMUSP00000082132	TRANSLATION	protein_coding	-	CCDS26140.1	1	413	0	5	1.5	395	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000066366	Serpina1a	ENSMUST00000072876	ENSMUSP00000072652	TRANSLATION	protein_coding	-	CCDS79152.1	1	436	0	5	0.5	395	0	-2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000066366	Serpina1a	ENSMUST00000124717	ENSMUSP00000120398	TRANSLATION	protein_coding	stop	-	3	96	0	1	0	52.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000020635	Fkbp1b	ENSMUST00000020964	ENSMUSP00000020964	TRANSLATION	protein_coding	-	CCDS25792.1	1	108	3	3	21.5	115.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000020635	Fkbp1b	ENSMUST00000219880	ENSMUSP00000151687	TRANSLATION	protein_coding	-	-	1	80	2	2.3	6.5	59.2	0	-4,-5	-	-	10.321	MINOR
ENSMUSG00000032705	Exd2	ENSMUST00000219757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032705	Exd2	ENSMUST00000038185	ENSMUSP00000043049	TRANSLATION	protein_coding	-	CCDS49098.1	1	650	3	1.98	0.5	57.2	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000032705	Exd2	ENSMUST00000218565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032705	Exd2	ENSMUST00000220239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032705	Exd2	ENSMUST00000219039	ENSMUSP00000151990	TRANSLATION	nonsense_mediated_decay	start	-	5	20	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032705	Exd2	ENSMUST00000219272	ENSMUSP00000151717	TRANSLATION	protein_coding	stop	-	2	112	0	1.57	0	28.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032705	Exd2	ENSMUST00000219477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043319	Cox8c	ENSMUST00000053611	ENSMUSP00000056155	TRANSLATION	protein_coding	-	CCDS56857.1	1	72	0	0	1.5	40.5	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000008822	Acyp1	ENSMUST00000117138	ENSMUSP00000113161	TRANSLATION	protein_coding	-	CCDS26055.1	2	99	7	1.75	17.3	79.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000008822	Acyp1	ENSMUST00000121930	ENSMUSP00000112609	TRANSLATION	protein_coding	-	-	2	157	7	1.75	1	79.3	0	-4,-7	-	-	18	MINOR
ENSMUSG00000008822	Acyp1	ENSMUST00000008966	ENSMUSP00000008966	TRANSLATION	protein_coding	-	CCDS26055.1	1	99	7	1.75	17.3	79.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000008822	Acyp1	ENSMUST00000065913	ENSMUSP00000070555	TRANSLATION	protein_coding	-	-	1	108	7	0.75	0.5	0	0	-4,-5	-	-	8.574	MINOR
ENSMUSG00000113475	Gm49366	ENSMUST00000221229	ENSMUSP00000152794	TRANSLATION	protein_coding,RT	start/stop	-	3	143	0	2.5	0	94.5	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000060950	Trmt61a	ENSMUST00000084947	ENSMUSP00000082011	TRANSLATION	protein_coding	-	CCDS26184.1	1	290	17	4.25	1.5	357.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060950	Trmt61a	ENSMUST00000168338	ENSMUSP00000133128	TRANSLATION	protein_coding	-	CCDS26184.1	5	290	17	4.25	1.5	357.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060950	Trmt61a	ENSMUST00000221089	ENSMUSP00000152280	TRANSLATION	protein_coding	stop	-	3	171	15	2.5	0	203.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060950	Trmt61a	ENSMUST00000222737	ENSMUSP00000152056	TRANSLATION	protein_coding	stop	-	2	92	0	1	0	51.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091931	Gon7	ENSMUST00000173969	ENSMUSP00000136425	TRANSLATION	protein_coding,RT	-	CCDS49148.1	1	98	0	0	5.1	126.5	0	-4,-5	-	-	-1	PRINCIPAL:2
ENSMUSG00000091931	Gon7	ENSMUST00000179263	ENSMUSP00000137212	TRANSLATION	protein_coding,RT	-	-	1	86	0	0	0	81.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000045440	Insm2	ENSMUST00000051857	ENSMUSP00000061046	TRANSLATION	protein_coding	-	CCDS25919.1	-	493	20	0.4	1.5	44.9	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000095200	Ighv1-7	ENSMUST00000103496	ENSMUSP00000100277	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	62.4	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000036231	Agr3	ENSMUST00000042101	ENSMUSP00000049212	TRANSLATION	protein_coding	-	CCDS25880.1	1	165	7	4.8	11.1	83.1	0	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000036231	Agr3	ENSMUST00000154042	ENSMUSP00000121230	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000021192	Golga5	ENSMUST00000021609	ENSMUSP00000021609	TRANSLATION	protein_coding	-	CCDS36526.1	1	729	0	0	1.5	457.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021192	Golga5	ENSMUST00000179218	ENSMUSP00000137305	TRANSLATION	protein_coding	-	CCDS36526.1	1	729	0	0	1.5	457.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021192	Golga5	ENSMUST00000222744	ENSMUSP00000152653	TRANSLATION	protein_coding	start	-	3	234	0	0	0	273.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021054	Sgpp1	ENSMUST00000021450	ENSMUSP00000021450	TRANSLATION	protein_coding	-	CCDS25986.1	1	430	4	0	1.5	54.3	6	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000021054	Sgpp1	ENSMUST00000220285	ENSMUSP00000151268	TRANSLATION	protein_coding	-	-	1	268	3	0	0	37	4	-4,0	-	-	7.086	MINOR
ENSMUSG00000021262	Evl	ENSMUST00000077735	ENSMUSP00000076916	TRANSLATION	protein_coding	-	CCDS26161.1	1	393	0	4.458	1.5	183.4	0	-4,-5	-	-	12.094	MINOR
ENSMUSG00000021262	Evl	ENSMUST00000021689	ENSMUSP00000021689	TRANSLATION	protein_coding	-	CCDS49167.1	1	414	0	4.458	3.9	183.4	0	-4,-5	-	-	13.21	MINOR
ENSMUSG00000021262	Evl	ENSMUST00000223109	ENSMUSP00000152364	TRANSLATION	protein_coding	stop	-	1	426	0	3.93	0	149.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021262	Evl	ENSMUST00000223548	ENSMUSP00000152440	TRANSLATION	protein_coding	start	-	3	39	0	0.528	0	61.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021262	Evl	ENSMUST00000109854	ENSMUSP00000105480	TRANSLATION	protein_coding	-	CCDS49168.1	1	399	0	4.524	5.3	183.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021262	Evl	ENSMUST00000222048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021262	Evl	ENSMUST00000172409	ENSMUSP00000133072	TRANSLATION	protein_coding	-	CCDS49169.1	1	401	0	4.128	2.7	167.4	0	-4,-5	-	-	11.032	MINOR
ENSMUSG00000046782	Ttc6	ENSMUST00000172852	ENSMUSP00000133313	TRANSLATION	protein_coding	start	-	3	48	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046782	Ttc6	ENSMUST00000172939	ENSMUSP00000134273	TRANSLATION	protein_coding	-	CCDS83963.1	5	1857	0	8.97	0.5	79.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046782	Ttc6	ENSMUST00000101398	ENSMUSP00000098946	TRANSLATION	protein_coding	-	-	1	441	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000096074	Ighv1-72	ENSMUST00000103541	ENSMUSP00000100322	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	58.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021209	Ppp4r4	ENSMUST00000190151	ENSMUSP00000139815	TRANSLATION	protein_coding	start/stop	-	5	115	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021209	Ppp4r4	ENSMUST00000190664	ENSMUSP00000140295	TRANSLATION	protein_coding	start/stop	-	5	232	0	1.84	0	18.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021209	Ppp4r4	ENSMUST00000021631	ENSMUSP00000021631	TRANSLATION	protein_coding	-	CCDS36532.1	1	875	0	4.784	5.3	18.6	0	-4,-5	-	-	13.564	PRINCIPAL:2
ENSMUSG00000021209	Ppp4r4	ENSMUST00000187155	ENSMUSP00000140874	TRANSLATION	protein_coding	-	-	5	766	0	4.784	6.5	18.6	0	-2,-4	-	-	14	ALTERNATIVE:1
ENSMUSG00000021209	Ppp4r4	ENSMUST00000189871	ENSMUSP00000139786	TRANSLATION	nonsense_mediated_decay	-	-	1	790	0	4.784	0.5	18.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048982	Gphb5	ENSMUST00000051079	ENSMUSP00000061488	TRANSLATION	protein_coding	-	CCDS25982.1	1	130	0	1.2	7.5	66.5	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000020592	Sdc1	ENSMUST00000161883	ENSMUSP00000123896	TRANSLATION	protein_coding	stop	-	3	206	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020592	Sdc1	ENSMUST00000159821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020592	Sdc1	ENSMUST00000020911	ENSMUSP00000020911	TRANSLATION	protein_coding	-	CCDS25803.1	1	311	0	0	1.5	92.6	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020592	Sdc1	ENSMUST00000171158	ENSMUSP00000131491	TRANSLATION	protein_coding	-	CCDS25803.1	1	311	0	0	1.5	92.6	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020592	Sdc1	ENSMUST00000160348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021288	Klc1	ENSMUST00000141435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021288	Klc1	ENSMUST00000147203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021288	Klc1	ENSMUST00000084941	ENSMUSP00000082004	TRANSLATION	protein_coding	-	CCDS36565.1	1	616	0	7.516	7.5	198.4	0	-4,-5	-	-	13.788	MINOR
ENSMUSG00000021288	Klc1	ENSMUST00000118471	ENSMUSP00000113171	TRANSLATION	protein_coding	-	CCDS49182.1	1	542	0	7.516	6	198.4	0	-4,-5	-	-	13.377	MINOR
ENSMUSG00000021288	Klc1	ENSMUST00000239017	ENSMUSP00000159193	TRANSLATION	protein_coding	-	-	-	637	0	7.516	11.9	198.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021288	Klc1	ENSMUST00000134578	ENSMUSP00000120491	TRANSLATION	protein_coding	start	-	3	172	0	3.316	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021288	Klc1	ENSMUST00000140792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021288	Klc1	ENSMUST00000238980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021288	Klc1	ENSMUST00000124197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021288	Klc1	ENSMUST00000120544	ENSMUSP00000113237	TRANSLATION	protein_coding	-	CCDS70423.1	5	560	0	7.516	7.6	198.4	0	-4,-5	-	-	13.818	MINOR
ENSMUSG00000021288	Klc1	ENSMUST00000122300	ENSMUSP00000113997	TRANSLATION	protein_coding	-	CCDS49183.1	1	608	0	7.45	3.9	195.1	0	-4,-5	-	-	12.468	MINOR
ENSMUSG00000094174	Ighv6-4	ENSMUST00000191918	ENSMUSP00000141798	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.5	0	50.3	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000094174	Ighv6-4	ENSMUST00000177949	ENSMUSP00000136881	TRANSLATION	protein_coding	start/stop	-	-	99	6	1	0	50.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021125	Arg2	ENSMUST00000021550	ENSMUSP00000021550	TRANSLATION	protein_coding	-	CCDS26007.1	1	354	14	7.35	6.7	259.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000096049	Gm2075	ENSMUST00000180285	ENSMUSP00000136486	TRANSLATION	protein_coding	-	-	-	144	0	1	3	69.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000037669	Ldah	ENSMUST00000218305	ENSMUSP00000151881	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000220345	ENSMUSP00000151631	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000218883	ENSMUSP00000151802	TRANSLATION	protein_coding	stop	-	3	190	1	0	0	166.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000217872	ENSMUSP00000151257	TRANSLATION	protein_coding	start	-	2	116	0	0	0	75.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000219058	ENSMUSP00000151541	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000217763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037669	Ldah	ENSMUST00000218086	ENSMUSP00000151612	TRANSLATION	protein_coding	-	-	1	272	1	0	0.5	208.7	0	-4,-5	-	-	3.37	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000037383	ENSMUSP00000042285	TRANSLATION	protein_coding	-	CCDS25798.1	1	326	2	0	1.5	269.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037669	Ldah	ENSMUST00000219357	ENSMUSP00000151362	TRANSLATION	nonsense_mediated_decay	-	-	3	114	0	0	0	52.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000219043	ENSMUSP00000151289	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	0	0	52.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000220274	ENSMUSP00000151309	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000169104	ENSMUSP00000129424	TRANSLATION	protein_coding	-	CCDS49023.1	1	236	1	0	0.5	184.2	0	-4,-5	-	-	1.9	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000219532	ENSMUSP00000151941	TRANSLATION	protein_coding	start	-	2	61	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037669	Ldah	ENSMUST00000217999	ENSMUSP00000151852	TRANSLATION	protein_coding	stop	-	5	208	1	0	0	148.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000221507	ENSMUSP00000152651	TRANSLATION	protein_coding	stop	-	3	156	4	3.83	0	52.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000221711	ENSMUSP00000152601	TRANSLATION	protein_coding	stop	-	3	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000222968	ENSMUSP00000152703	TRANSLATION	protein_coding	-	-	1	512	8	11.83	0.5	263.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000221992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054309	Cpsf3	ENSMUST00000221042	ENSMUSP00000152222	TRANSLATION	nonsense_mediated_decay	start	-	1	241	6	6.2	0	82.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000220940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054309	Cpsf3	ENSMUST00000222883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054309	Cpsf3	ENSMUST00000222474	ENSMUSP00000152447	TRANSLATION	protein_coding	stop	-	3	28	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000220665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054309	Cpsf3	ENSMUST00000221145	ENSMUSP00000152325	TRANSLATION	protein_coding	stop	-	5	247	6	6.58	0	71.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054309	Cpsf3	ENSMUST00000067284	ENSMUSP00000068148	TRANSLATION	protein_coding	-	CCDS25834.1	1	684	8	11.83	7.6	445.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000047446	Arl4a	ENSMUST00000136441	ENSMUSP00000122987	TRANSLATION	nonsense_mediated_decay	-	-	1	64	11	1	0	62.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047446	Arl4a	ENSMUST00000138572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047446	Arl4a	ENSMUST00000101472	ENSMUSP00000099013	TRANSLATION	protein_coding	-	CCDS25890.1	1	200	21	1.8	16.2	225.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000047446	Arl4a	ENSMUST00000146905	ENSMUSP00000114458	TRANSLATION	protein_coding	-	CCDS25890.1	1	200	21	1.8	16.2	225.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000047446	Arl4a	ENSMUST00000144910	ENSMUSP00000122126	TRANSLATION	nonsense_mediated_decay	-	-	1	64	11	1	0	62.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062563	Cys1	ENSMUST00000172771	ENSMUSP00000134701	TRANSLATION	protein_coding	start	-	3	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062563	Cys1	ENSMUST00000186602	ENSMUSP00000140759	TRANSLATION	protein_coding	-	CCDS36422.1	1	145	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000062563	Cys1	ENSMUST00000156453	ENSMUSP00000134522	TRANSLATION	protein_coding	-	CCDS36422.1	2	145	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000062563	Cys1	ENSMUST00000148477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062563	Cys1	ENSMUST00000074163	ENSMUSP00000073796	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	0	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062563	Cys1	ENSMUST00000173145	ENSMUSP00000133902	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	0	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062563	Cys1	ENSMUST00000163514	ENSMUSP00000126787	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	0	1.5	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062563	Cys1	ENSMUST00000189849	ENSMUSP00000141121	TRANSLATION	protein_coding	-	CCDS36422.1	1	145	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000072972	Adam4	ENSMUST00000085319	ENSMUSP00000082427	TRANSLATION	protein_coding	-	CCDS26019.1	-	763	3	0.32	0.5	280.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000021228	Acot3	ENSMUST00000021653	ENSMUSP00000021653	TRANSLATION	protein_coding	-	CCDS26036.1	1	432	4	5.132	1.5	439.8	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000021228	Acot3	ENSMUST00000120927	ENSMUSP00000112678	TRANSLATION	protein_coding	-	CCDS83985.1	1	421	4	5	1.7	439.8	0	-4,-5	-	-	15.736	ALTERNATIVE:2
ENSMUSG00000021228	Acot3	ENSMUST00000223080	ENSMUSP00000152164	TRANSLATION	protein_coding	-	-	1	282	0	2.132	0	150.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021066	Atl1	ENSMUST00000223456	ENSMUSP00000152131	TRANSLATION	protein_coding	stop	-	2	133	12	2.5	0	88.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021066	Atl1	ENSMUST00000222141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021066	Atl1	ENSMUST00000021466	ENSMUSP00000021466	TRANSLATION	protein_coding	-	CCDS36465.1	1	558	22	10.08	12	336.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000021066	Atl1	ENSMUST00000220935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021066	Atl1	ENSMUST00000222246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042628	Zfyve1	ENSMUST00000221228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042628	Zfyve1	ENSMUST00000221919	ENSMUSP00000152501	TRANSLATION	protein_coding	-	CCDS26028.1	1	777	36	2.52	6.4	114.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042628	Zfyve1	ENSMUST00000048319	ENSMUSP00000042224	TRANSLATION	protein_coding	-	CCDS26028.1	1	777	36	2.52	6.4	114.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042628	Zfyve1	ENSMUST00000223222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042628	Zfyve1	ENSMUST00000223380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042628	Zfyve1	ENSMUST00000222448	ENSMUSP00000152864	TRANSLATION	protein_coding	stop	-	3	175	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098134	Rnf113a2	ENSMUST00000183146	ENSMUSP00000138536	TRANSLATION	protein_coding	-	CCDS59575.1	-	337	12	0.4	1.5	66.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096396	Ighd5-2	ENSMUST00000179166	ENSMUSP00000142199	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000092305	Prps1l1	ENSMUST00000134550	ENSMUSP00000133931	TRANSLATION	protein_coding	-	CCDS56836.1	-	318	15	1	19.5	281.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037896	Rcor1	ENSMUST00000116388	ENSMUSP00000112089	TRANSLATION	protein_coding	-	CCDS49179.1	1	382	0	8.35	3.5	114.2	0	-4,-7	-	-	11.398	PRINCIPAL:2
ENSMUSG00000037896	Rcor1	ENSMUST00000084968	ENSMUSP00000082034	TRANSLATION	protein_coding	-	-	1	480	0	9.15	1.7	114.2	0	-1,1	-	-	12.28	ALTERNATIVE:2
ENSMUSG00000113902	Ndufb1-ps	ENSMUST00000221422	ENSMUSP00000159138	TRANSLATION	protein_coding	-	-	1	57	0	1.33	3.2	114	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000113902	Ndufb1-ps	ENSMUST00000222608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000113902	Ndufb1-ps	ENSMUST00000221227	ENSMUSP00000158975	TRANSLATION	protein_coding	-	-	3	57	0	1.33	3.2	114	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000113902	Ndufb1-ps	ENSMUST00000221191	ENSMUSP00000159028	TRANSLATION	protein_coding	-	-	2	57	0	1.33	3.2	114	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000020577	Tspan13	ENSMUST00000222584	ENSMUSP00000152258	TRANSLATION	protein_coding	stop	-	2	133	0	0	0	56.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000020577	Tspan13	ENSMUST00000220641	ENSMUSP00000152769	TRANSLATION	nonsense_mediated_decay	-	-	3	65	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000020577	Tspan13	ENSMUST00000020896	ENSMUSP00000020896	TRANSLATION	protein_coding	-	CCDS25882.1	1	204	0	0	12.8	74.4	5	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000019718	L3hypdh	ENSMUST00000138029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019718	L3hypdh	ENSMUST00000124405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019718	L3hypdh	ENSMUST00000019862	ENSMUSP00000019862	TRANSLATION	protein_coding	-	CCDS25966.1	1	354	0	3.8	7.5	394.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021280	Exoc3l4	ENSMUST00000220636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021280	Exoc3l4	ENSMUST00000220852	ENSMUSP00000152326	TRANSLATION	protein_coding	stop	-	3	177	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021280	Exoc3l4	ENSMUST00000072646	ENSMUSP00000072438	TRANSLATION	protein_coding	-	CCDS26177.1	1	721	0	4.405	1.5	359.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021280	Exoc3l4	ENSMUST00000220537	ENSMUSP00000152091	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021280	Exoc3l4	ENSMUST00000222897	ENSMUSP00000152844	TRANSLATION	protein_coding	-	CCDS26177.1	1	721	0	4.405	1.5	359.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021280	Exoc3l4	ENSMUST00000222437	ENSMUSP00000152094	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021280	Exoc3l4	ENSMUST00000223369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021280	Exoc3l4	ENSMUST00000221144	ENSMUSP00000152063	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021280	Exoc3l4	ENSMUST00000223050	ENSMUSP00000152337	TRANSLATION	protein_coding	-	CCDS26177.1	1	721	0	4.405	1.5	359.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021280	Exoc3l4	ENSMUST00000223431	ENSMUSP00000152629	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021280	Exoc3l4	ENSMUST00000222262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021280	Exoc3l4	ENSMUST00000222126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094689	Ighv1-81	ENSMUST00000103548	ENSMUSP00000100329	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	56.5	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000020628	Trappc12	ENSMUST00000221783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020628	Trappc12	ENSMUST00000020954	ENSMUSP00000020954	TRANSLATION	protein_coding	-	CCDS25854.1	1	797	0	0	1.5	27.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020628	Trappc12	ENSMUST00000223552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020628	Trappc12	ENSMUST00000223447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020628	Trappc12	ENSMUST00000221335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020628	Trappc12	ENSMUST00000170994	ENSMUSP00000132009	TRANSLATION	protein_coding	-	CCDS49040.1	1	580	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020628	Trappc12	ENSMUST00000168129	ENSMUSP00000127752	TRANSLATION	protein_coding	-	CCDS25854.1	1	797	0	0	1.5	27.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095866	Ighv2-4	ENSMUST00000103447	ENSMUSP00000100228	TRANSLATION	IG_V_gene	stop	-	-	116	6	1	0	50.2	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000071179	Serpina16	ENSMUST00000164148	ENSMUSP00000126933	TRANSLATION	protein_coding	-	CCDS79151.1	5	418	0	3	0.5	249.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071179	Serpina16	ENSMUST00000095451	ENSMUSP00000093103	TRANSLATION	protein_coding	-	CCDS79151.1	5	418	0	3	0.5	249.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047227	Gm527	ENSMUST00000223388	ENSMUSP00000152061	TRANSLATION	protein_coding	stop	-	5	249	0	0	2	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047227	Gm527	ENSMUST00000058135	ENSMUSP00000059435	TRANSLATION	protein_coding	-	CCDS56841.1	1	310	0	0	11	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000047227	Gm527	ENSMUST00000220993	ENSMUSP00000152672	TRANSLATION	protein_coding	-	-	5	280	0	0	1.2	0	0	-4,-5	-	-	0.06	MINOR
ENSMUSG00000047227	Gm527	ENSMUST00000220928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021171	Esyt2	ENSMUST00000223181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021171	Esyt2	ENSMUST00000220754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021171	Esyt2	ENSMUST00000223150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021171	Esyt2	ENSMUST00000220720	ENSMUSP00000152786	TRANSLATION	nonsense_mediated_decay	-	-	1	326	0	5.5	0	407.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000021171	Esyt2	ENSMUST00000220816	ENSMUSP00000152444	TRANSLATION	protein_coding	-	CCDS26211.1	1	845	6	16.58	1.5	586.4	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021171	Esyt2	ENSMUST00000100986	ENSMUSP00000098548	TRANSLATION	protein_coding	-	CCDS26211.1	1	845	6	16.58	1.5	586.4	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021171	Esyt2	ENSMUST00000221584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021171	Esyt2	ENSMUST00000220804	ENSMUSP00000152311	TRANSLATION	nonsense_mediated_decay	start	-	1	89	0	2	0	104.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000102301	Ighv8-2	ENSMUST00000195037	ENSMUSP00000141405	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.3	0	40.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000042507	Elmsan1	ENSMUST00000220974	ENSMUSP00000152853	TRANSLATION	protein_coding	stop	-	1	1071	8	1.48	0	29.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042507	Elmsan1	ENSMUST00000137562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042507	Elmsan1	ENSMUST00000110294	ENSMUSP00000105923	TRANSLATION	protein_coding	-	CCDS49109.1	5	1089	8	1.48	0.5	29.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000042507	Elmsan1	ENSMUST00000046266	ENSMUSP00000048120	TRANSLATION	protein_coding	-	CCDS49109.1	1	1089	8	1.48	0.5	29.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000042507	Elmsan1	ENSMUST00000130038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076646	Ighv2-6-8	ENSMUST00000192911	ENSMUSP00000141760	TRANSLATION	IG_V_gene	stop	-	-	116	6	1	0	50.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076646	Ighv2-6-8	ENSMUST00000103455	ENSMUSP00000100236	TRANSLATION	IG_V_gene	stop	-	-	114	6	1	0	50.8	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000061458	Nol10	ENSMUST00000046011	ENSMUSP00000035930	TRANSLATION	protein_coding	-	CCDS25828.1	1	687	0	0	4	46.4	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000021226	Acot2	ENSMUST00000021649	ENSMUSP00000021649	TRANSLATION	protein_coding	-	CCDS26034.1	1	453	3	3	1.5	422.4	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000068940	Tcl1b3	ENSMUST00000090990	ENSMUSP00000088512	TRANSLATION	protein_coding	-	CCDS36547.1	1	122	0	0.92	0.5	139.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021007	Spata7	ENSMUST00000221273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021007	Spata7	ENSMUST00000101146	ENSMUSP00000098705	TRANSLATION	protein_coding	-	CCDS70413.1	1	550	0	0	0.5	497.6	0	-4,0	-	-	0	MINOR
ENSMUSG00000021007	Spata7	ENSMUST00000222195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021007	Spata7	ENSMUST00000101144	ENSMUSP00000098704	TRANSLATION	protein_coding	-	CCDS79145.1	1	415	0	0	0.5	220.5	0	-4,0	-	-	0	MINOR
ENSMUSG00000021007	Spata7	ENSMUST00000130136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021007	Spata7	ENSMUST00000222378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021007	Spata7	ENSMUST00000048402	ENSMUSP00000045827	TRANSLATION	protein_coding	-	CCDS26097.1	1	582	0	0	0.5	623	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000021007	Spata7	ENSMUST00000155899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021007	Spata7	ENSMUST00000152482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095863	Ighv1-67	ENSMUST00000103538	ENSMUSP00000100319	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	46.4	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095863	Ighv1-67	ENSMUST00000198646	ENSMUSP00000143248	TRANSLATION	IG_V_gene	start/stop	-	-	117	3	1.5	0	46.4	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000001627	Ifrd1	ENSMUST00000171530	ENSMUSP00000128635	TRANSLATION	nonsense_mediated_decay	-	-	5	148	0	0	0	100.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001627	Ifrd1	ENSMUST00000001672	ENSMUSP00000001672	TRANSLATION	protein_coding	-	CCDS25893.1	1	449	0	0	5.1	465.5	0	-4,-7	-	-	7.39	PRINCIPAL:2
ENSMUSG00000001627	Ifrd1	ENSMUST00000164047	ENSMUSP00000127553	TRANSLATION	protein_coding	start	-	3	86	0	0	0	119.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001627	Ifrd1	ENSMUST00000164354	ENSMUSP00000130846	TRANSLATION	protein_coding	stop	-	3	86	0	0	0	90.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001627	Ifrd1	ENSMUST00000169319	ENSMUSP00000130824	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	109.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001627	Ifrd1	ENSMUST00000165027	ENSMUSP00000133028	TRANSLATION	protein_coding	-	-	5	401	0	0	6.9	455.4	0	-4,-5	-	-	7.394	ALTERNATIVE:1
ENSMUSG00000001627	Ifrd1	ENSMUST00000171553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001627	Ifrd1	ENSMUST00000170119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001627	Ifrd1	ENSMUST00000169926	ENSMUSP00000127673	TRANSLATION	protein_coding	stop	-	5	138	0	0	0	161.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001627	Ifrd1	ENSMUST00000170752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041771	Slc24a4	ENSMUST00000235018	ENSMUSP00000157352	TRANSLATION	protein_coding	-	CCDS26117.1	-	605	5	1.988	1.7	198.9	12	0,-4	-	-	16.25	PRINCIPAL:2
ENSMUSG00000041771	Slc24a4	ENSMUST00000079020	ENSMUSP00000078030	TRANSLATION	protein_coding	-	-	1	622	5	1.988	2.2	198.9	12	-4,-2	-	-	16.25	ALTERNATIVE:2
ENSMUSG00000041771	Slc24a4	ENSMUST00000159329	ENSMUSP00000124513	TRANSLATION	protein_coding	-	-	1	564	5	2.273	0	182.7	11	-4,-2	-	-	16.028	ALTERNATIVE:2
ENSMUSG00000041771	Slc24a4	ENSMUST00000161325	ENSMUSP00000125012	TRANSLATION	protein_coding	start	-	1	603	5	2.273	2.7	198.9	12	-4,-2	-	-	-1	MINOR
ENSMUSG00000114075	Gm16368	ENSMUST00000222340	ENSMUSP00000152416	TRANSLATION	protein_coding	-	-	-	144	0	1	3	64.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020982	Nemf	ENSMUST00000221722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020982	Nemf	ENSMUST00000222065	ENSMUSP00000152476	TRANSLATION	protein_coding	stop	-	5	149	0	1.41	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020982	Nemf	ENSMUST00000221794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000220484	ENSMUSP00000152242	TRANSLATION	nonsense_mediated_decay	-	-	3	122	0	1.65	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020982	Nemf	ENSMUST00000220959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000221193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000222763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020982	Nemf	ENSMUST00000021368	ENSMUSP00000021368	TRANSLATION	protein_coding	-	CCDS25951.1	5	1064	0	1.89	1.5	184.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020982	Nemf	ENSMUST00000220674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000221278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000221112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020982	Nemf	ENSMUST00000222674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021258	Ccnk	ENSMUST00000221167	ENSMUSP00000152784	TRANSLATION	protein_coding	-	CCDS49165.1	1	582	0	5.85	0.5	81.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021258	Ccnk	ENSMUST00000101055	ENSMUSP00000098616	TRANSLATION	protein_coding	-	CCDS49165.1	5	582	0	5.85	0.5	81.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021258	Ccnk	ENSMUST00000223363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058207	Serpina3k	ENSMUST00000043058	ENSMUSP00000042095	TRANSLATION	protein_coding	-	CCDS36537.1	1	418	0	4	0.5	400.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021177	Tdp1	ENSMUST00000125639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021177	Tdp1	ENSMUST00000021594	ENSMUSP00000021594	TRANSLATION	protein_coding	-	CCDS26105.2	1	609	0	11.85	1.5	460.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021177	Tdp1	ENSMUST00000221396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021177	Tdp1	ENSMUST00000137653	ENSMUSP00000123269	TRANSLATION	protein_coding	stop	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021177	Tdp1	ENSMUST00000153627	ENSMUSP00000118656	TRANSLATION	protein_coding	-	CCDS26105.2	1	609	0	11.85	1.5	460.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021177	Tdp1	ENSMUST00000151019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021177	Tdp1	ENSMUST00000220685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021177	Tdp1	ENSMUST00000126424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021177	Tdp1	ENSMUST00000128739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020978	Klhdc2	ENSMUST00000138585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020978	Klhdc2	ENSMUST00000151571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020978	Klhdc2	ENSMUST00000021362	ENSMUSP00000021362	TRANSLATION	protein_coding	-	CCDS25950.1	1	406	0	2.795	11.5	57.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020978	Klhdc2	ENSMUST00000154667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062054	Iah1	ENSMUST00000223345	ENSMUSP00000152708	TRANSLATION	protein_coding	-	-	1	158	3	2.06	0	67.7	0	-4,-7	-	-	11.124	MINOR
ENSMUSG00000062054	Iah1	ENSMUST00000221693	ENSMUSP00000152822	TRANSLATION	protein_coding	stop	-	3	185	2	1.81	0	54.5	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000062054	Iah1	ENSMUST00000222344	ENSMUSP00000152779	TRANSLATION	protein_coding	start/stop	-	3	164	3	2.31	0	67.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062054	Iah1	ENSMUST00000076813	ENSMUSP00000076090	TRANSLATION	protein_coding	-	CCDS25835.1	1	249	5	2.96	2.7	101.9	0	-4,-7	-	-	17	PRINCIPAL:1
ENSMUSG00000020648	Dus4l	ENSMUST00000219855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020648	Dus4l	ENSMUST00000219098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020648	Dus4l	ENSMUST00000020977	ENSMUSP00000020977	TRANSLATION	protein_coding	-	CCDS25865.1	1	324	18	3.7	0.5	245.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000020646	Mboat2	ENSMUST00000220497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020646	Mboat2	ENSMUST00000221952	ENSMUSP00000152348	TRANSLATION	protein_coding	-	CCDS36423.1	1	487	0	0	1.5	107.8	7	-4,-5	-	-	5.814	ALTERNATIVE:2
ENSMUSG00000020646	Mboat2	ENSMUST00000222994	ENSMUSP00000152712	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020646	Mboat2	ENSMUST00000110942	ENSMUSP00000106567	TRANSLATION	protein_coding	-	CCDS25845.1	1	519	0	0	2.7	104.1	7	-4,-5	-	-	5.592	PRINCIPAL:3
ENSMUSG00000020646	Mboat2	ENSMUST00000078902	ENSMUSP00000077937	TRANSLATION	protein_coding	-	-	5	386	0	0	2.2	110.9	4	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020646	Mboat2	ENSMUST00000222198	ENSMUSP00000152150	TRANSLATION	protein_coding	stop	-	5	129	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000021070	Bdkrb2	ENSMUST00000001652	ENSMUSP00000001652	TRANSLATION	protein_coding	-	CCDS49160.1	1	392	0	0.6	2.7	184.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021221	Dpf3	ENSMUST00000140327	ENSMUSP00000120700	TRANSLATION	protein_coding	start	-	5	81	6	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021221	Dpf3	ENSMUST00000133282	ENSMUSP00000121199	TRANSLATION	protein_coding	start	-	5	292	10	2.65	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021221	Dpf3	ENSMUST00000177959	ENSMUSP00000137477	TRANSLATION	protein_coding	-	CCDS56846.1	1	356	10	2.65	3.9	126	0	-4,-5	-	-	5.252	MINOR
ENSMUSG00000021221	Dpf3	ENSMUST00000178756	ENSMUSP00000136280	TRANSLATION	protein_coding	-	CCDS59574.1	1	378	22	5.15	13.6	170.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021221	Dpf3	ENSMUST00000177801	ENSMUSP00000136740	TRANSLATION	protein_coding	-	-	1	315	10	2.65	0	37.1	0	-4,-7	-	-	1.002	MINOR
ENSMUSG00000021221	Dpf3	ENSMUST00000144237	ENSMUSP00000122004	TRANSLATION	protein_coding	start	-	5	293	10	2.65	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021221	Dpf3	ENSMUST00000147469	ENSMUSP00000122598	TRANSLATION	protein_coding	start	-	5	314	22	5.15	0	44.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034460	Six4	ENSMUST00000175693	ENSMUSP00000135699	TRANSLATION	protein_coding	-	-	5	518	0	1	0	203.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034460	Six4	ENSMUST00000043208	ENSMUSP00000036150	TRANSLATION	protein_coding	-	CCDS25974.1	1	775	0	1	1.5	203.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000054302	Eapp	ENSMUST00000110713	ENSMUSP00000106341	TRANSLATION	protein_coding	-	-	1	243	0	0	0	99.2	0	-4,-5	-	-	1.02	MINOR
ENSMUSG00000054302	Eapp	ENSMUST00000161592	ENSMUSP00000123698	TRANSLATION	protein_coding	-	CCDS25910.1	1	281	1	0	1.5	182.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054302	Eapp	ENSMUST00000067272	ENSMUSP00000069381	TRANSLATION	protein_coding	-	-	3	56	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054302	Eapp	ENSMUST00000163433	ENSMUSP00000130251	TRANSLATION	protein_coding	-	CCDS25910.1	1	281	1	0	1.5	182.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054302	Eapp	ENSMUST00000162106	ENSMUSP00000124232	TRANSLATION	protein_coding	stop	-	5	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054302	Eapp	ENSMUST00000160085	ENSMUSP00000124699	TRANSLATION	protein_coding	-	-	3	156	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021144	Mta1	ENSMUST00000109726	ENSMUSP00000105348	TRANSLATION	protein_coding	-	CCDS36574.1	1	698	4	9.1	2.9	231	0	-4,-5	-	-	16.559	PRINCIPAL:3
ENSMUSG00000021144	Mta1	ENSMUST00000109727	ENSMUSP00000105349	TRANSLATION	protein_coding	-	CCDS84004.1	1	703	4	9.1	2.7	231.9	0	-4,-5	-	-	16.548	ALTERNATIVE:2
ENSMUSG00000021144	Mta1	ENSMUST00000109723	ENSMUSP00000105345	TRANSLATION	protein_coding	-	-	5	703	4	9.1	2.7	231.9	0	-4,-5	-	-	16.548	ALTERNATIVE:2
ENSMUSG00000021144	Mta1	ENSMUST00000130926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021144	Mta1	ENSMUST00000156030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021144	Mta1	ENSMUST00000009099	ENSMUSP00000009099	TRANSLATION	protein_coding	-	-	5	715	4	9.1	4.1	231.9	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000021144	Mta1	ENSMUST00000134488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021144	Mta1	ENSMUST00000069690	ENSMUSP00000064338	TRANSLATION	protein_coding	-	-	5	698	4	9.1	2.9	231	0	-4,-5	-	-	16.559	ALTERNATIVE:2
ENSMUSG00000059114	Lrrc74a	ENSMUST00000095527	ENSMUSP00000093183	TRANSLATION	protein_coding	-	CCDS56848.1	5	487	0	5.75	0.5	103.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000059114	Lrrc74a	ENSMUST00000223308	ENSMUSP00000152661	TRANSLATION	protein_coding	-	-	5	494	0	5.75	0	103.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000059114	Lrrc74a	ENSMUST00000223197	ENSMUSP00000152674	TRANSLATION	nonsense_mediated_decay	start	-	3	66	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059114	Lrrc74a	ENSMUST00000222180	ENSMUSP00000152776	TRANSLATION	nonsense_mediated_decay	-	-	5	139	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021179	Nrde2	ENSMUST00000223314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021179	Nrde2	ENSMUST00000221954	ENSMUSP00000152698	TRANSLATION	protein_coding	stop	-	2	228	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021179	Nrde2	ENSMUST00000021596	ENSMUSP00000021596	TRANSLATION	protein_coding	-	CCDS70414.1	5	1172	0	0	0.5	348.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034157	Cipc	ENSMUST00000185434	ENSMUSP00000140769	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000187814	ENSMUSP00000141049	TRANSLATION	protein_coding	-	-	1	432	0	0	0.5	347.3	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000034157	Cipc	ENSMUST00000185783	ENSMUSP00000140830	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000188046	ENSMUSP00000139742	TRANSLATION	nonsense_mediated_decay	-	-	3	81	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000188901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034157	Cipc	ENSMUST00000038369	ENSMUSP00000038630	TRANSLATION	protein_coding	-	CCDS56849.1	1	411	0	0	1.5	347.3	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000034157	Cipc	ENSMUST00000191032	ENSMUSP00000140097	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000189246	ENSMUSP00000140266	TRANSLATION	protein_coding	-	CCDS56849.1	2	411	0	0	1.5	347.3	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000034157	Cipc	ENSMUST00000190588	ENSMUSP00000140595	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000186499	ENSMUSP00000139553	TRANSLATION	protein_coding	start/stop	-	3	131	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034157	Cipc	ENSMUST00000191463	ENSMUSP00000140683	TRANSLATION	protein_coding	-	-	1	429	0	0	0	347.3	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000046518	Ferd3l	ENSMUST00000061035	ENSMUSP00000058994	TRANSLATION	protein_coding	-	CCDS25878.1	-	168	0	0.4	5.1	61.5	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000012211	Tex22	ENSMUST00000109729	ENSMUSP00000105351	TRANSLATION	protein_coding	-	CCDS26203.1	1	189	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000012211	Tex22	ENSMUST00000155492	ENSMUSP00000120443	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012211	Tex22	ENSMUST00000012355	ENSMUSP00000012355	TRANSLATION	protein_coding	-	CCDS26203.1	1	189	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000012211	Tex22	ENSMUST00000146107	ENSMUSP00000116272	TRANSLATION	protein_coding	-	CCDS26203.1	2	189	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000021136	Smoc1	ENSMUST00000021564	ENSMUSP00000021564	TRANSLATION	protein_coding	-	CCDS26017.1	1	452	4	1.38	2.7	287	0	4,-2	-	-	16.447	PRINCIPAL:2
ENSMUSG00000021136	Smoc1	ENSMUST00000110347	ENSMUSP00000105976	TRANSLATION	protein_coding	-	CCDS49102.1	1	463	4	1.38	2.7	280.4	0	4,-2	-	-	16.051	MINOR
ENSMUSG00000021136	Smoc1	ENSMUST00000129362	ENSMUSP00000122858	TRANSLATION	protein_coding	-	-	5	434	4	1.38	4.8	287	0	4,-2	-	-	17	ALTERNATIVE:1
ENSMUSG00000020561	Twistnb	ENSMUST00000219769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020561	Twistnb	ENSMUST00000218748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020561	Twistnb	ENSMUST00000219758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020561	Twistnb	ENSMUST00000020877	ENSMUSP00000020877	TRANSLATION	protein_coding	-	CCDS25877.1	1	330	0	1	0.5	37.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021113	Snapc1	ENSMUST00000220909	ENSMUSP00000152587	TRANSLATION	protein_coding	start	-	3	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021113	Snapc1	ENSMUST00000220882	ENSMUSP00000152248	TRANSLATION	protein_coding	start	-	5	195	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021113	Snapc1	ENSMUST00000222025	ENSMUSP00000152584	TRANSLATION	nonsense_mediated_decay	-	-	2	72	0	0	0	42.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021113	Snapc1	ENSMUST00000021532	ENSMUSP00000021532	TRANSLATION	protein_coding	-	CCDS25978.1	1	389	0	0	1.5	206.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021113	Snapc1	ENSMUST00000221556	ENSMUSP00000152102	TRANSLATION	nonsense_mediated_decay	start	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000085793	Lin52	ENSMUST00000222741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000085793	Lin52	ENSMUST00000221172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000085793	Lin52	ENSMUST00000221033	ENSMUSP00000152849	TRANSLATION	protein_coding	start	-	2	114	0	0	0	103.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000085793	Lin52	ENSMUST00000137170	ENSMUSP00000133045	TRANSLATION	protein_coding	-	CCDS49110.1	1	116	0	0	6.3	132.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000096276	Gm2042	ENSMUST00000181347	ENSMUSP00000138012	TRANSLATION	protein_coding	stop	-	2	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096276	Gm2042	ENSMUST00000181300	ENSMUSP00000138047	TRANSLATION	protein_coding	stop	-	3	189	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096276	Gm2042	ENSMUST00000180706	ENSMUSP00000137784	TRANSLATION	protein_coding	-	CCDS59578.1	1	175	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000096276	Gm2042	ENSMUST00000181326	ENSMUSP00000137729	TRANSLATION	protein_coding	-	-	1	306	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000096276	Gm2042	ENSMUST00000181843	ENSMUSP00000137699	TRANSLATION	protein_coding	stop	-	2	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096276	Gm2042	ENSMUST00000110145	ENSMUSP00000105772	TRANSLATION	protein_coding	-	CCDS56852.1	1	496	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000096276	Gm2042	ENSMUST00000181031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096276	Gm2042	ENSMUST00000180707	ENSMUSP00000137804	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096276	Gm2042	ENSMUST00000181394	ENSMUSP00000137988	TRANSLATION	protein_coding	stop	-	5	199	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096276	Gm2042	ENSMUST00000180803	ENSMUSP00000137832	TRANSLATION	protein_coding	stop	-	3	183	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004788	Eif2b2	ENSMUST00000140900	ENSMUSP00000122954	TRANSLATION	protein_coding	stop	-	5	228	0	3.68	0	165.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004788	Eif2b2	ENSMUST00000130760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004788	Eif2b2	ENSMUST00000136495	ENSMUSP00000122720	TRANSLATION	protein_coding	stop	-	5	302	0	5.13	0	164.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004788	Eif2b2	ENSMUST00000128709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004788	Eif2b2	ENSMUST00000151925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004788	Eif2b2	ENSMUST00000004910	ENSMUSP00000004910	TRANSLATION	protein_coding	-	CCDS26053.1	1	351	0	6.13	7.5	305.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000004788	Eif2b2	ENSMUST00000150935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050671	Ism2	ENSMUST00000145714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050671	Ism2	ENSMUST00000051601	ENSMUSP00000053451	TRANSLATION	protein_coding	start	-	5	449	0	0	0	114.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050671	Ism2	ENSMUST00000125733	ENSMUSP00000117108	TRANSLATION	protein_coding	-	CCDS70410.1	5	493	0	0	1.5	114.9	0	3,3	-	-	6	PRINCIPAL:1
ENSMUSG00000044712	Slc38a6	ENSMUST00000150996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044712	Slc38a6	ENSMUST00000058139	ENSMUSP00000057153	TRANSLATION	nonsense_mediated_decay	-	-	1	131	0	0	0	43.2	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000044712	Slc38a6	ENSMUST00000126488	ENSMUSP00000118374	TRANSLATION	protein_coding	-	-	5	131	0	0	0	43.2	7	-4,-6	-	-	0	MINOR
ENSMUSG00000044712	Slc38a6	ENSMUST00000122920	ENSMUSP00000124386	TRANSLATION	protein_coding	stop	-	5	114	0	0	0	43.2	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000044712	Slc38a6	ENSMUST00000134247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044712	Slc38a6	ENSMUST00000101313	ENSMUSP00000098871	TRANSLATION	protein_coding	-	-	1	70	0	0	0	42	5	-1,-4	-	-	0	MINOR
ENSMUSG00000044712	Slc38a6	ENSMUST00000140523	ENSMUSP00000120810	TRANSLATION	protein_coding	-	CCDS49088.1	1	457	0	0	2.7	252.2	16	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000044712	Slc38a6	ENSMUST00000153941	ENSMUSP00000114870	TRANSLATION	protein_coding	-	-	1	125	0	0	0	48	7	-4,-6	-	-	0	MINOR
ENSMUSG00000021033	Gstz1	ENSMUST00000220574	ENSMUSP00000152321	TRANSLATION	protein_coding	-	-	2	161	9	4.25	11.3	54.3	0	-4,-7	-	-	11.254	MINOR
ENSMUSG00000021033	Gstz1	ENSMUST00000063117	ENSMUSP00000053540	TRANSLATION	protein_coding	-	CCDS26071.1	1	216	15	5.83	15	93.8	0	-4,-2	-	-	22	PRINCIPAL:2
ENSMUSG00000021033	Gstz1	ENSMUST00000222222	ENSMUSP00000152707	TRANSLATION	protein_coding	-	-	2	215	15	5.83	15	93.8	0	-4,-7	-	-	22	ALTERNATIVE:1
ENSMUSG00000021033	Gstz1	ENSMUST00000222885	ENSMUSP00000152343	TRANSLATION	protein_coding	-	-	1	161	9	4.25	11.3	54.3	0	-4,-7	-	-	11.254	MINOR
ENSMUSG00000021033	Gstz1	ENSMUST00000220468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096577	Ighv1-71	ENSMUST00000196690	ENSMUSP00000143217	TRANSLATION	IG_V_gene	stop	-	-	119	8	1.5	0	58.4	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096577	Ighv1-71	ENSMUST00000166645	ENSMUSP00000128289	TRANSLATION	IG_V_gene	start/stop	-	-	100	8	1	0	58.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076652	Ighv7-3	ENSMUST00000103461	ENSMUSP00000100242	TRANSLATION	IG_V_gene	stop	-	-	120	6	1.5	0	57.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000001496	Nkx2-1	ENSMUST00000178477	ENSMUSP00000136103	TRANSLATION	protein_coding	-	CCDS25922.1	1	372	0	0.6	1.5	71.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000001496	Nkx2-1	ENSMUST00000001536	ENSMUSP00000001536	TRANSLATION	protein_coding	-	CCDS25922.1	1	372	0	0.6	1.5	71.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000020993	Trappc6b	ENSMUST00000218936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020993	Trappc6b	ENSMUST00000217660	ENSMUSP00000151733	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020993	Trappc6b	ENSMUST00000219652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020993	Trappc6b	ENSMUST00000021380	ENSMUSP00000021380	TRANSLATION	protein_coding	-	CCDS25932.1	1	158	0	4.25	14	149.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020993	Trappc6b	ENSMUST00000218150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020993	Trappc6b	ENSMUST00000217863	ENSMUSP00000151772	TRANSLATION	protein_coding	-	-	2	121	0	3.25	0.5	109	0	-4,-7	-	-	7.572	MINOR
ENSMUSG00000020993	Trappc6b	ENSMUST00000218799	ENSMUSP00000151903	TRANSLATION	nonsense_mediated_decay	-	-	3	50	0	1.5	0	26.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020993	Trappc6b	ENSMUST00000218523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020993	Trappc6b	ENSMUST00000217873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020993	Trappc6b	ENSMUST00000218686	ENSMUSP00000151224	TRANSLATION	protein_coding	-	-	3	96	0	2.5	0	51.1	0	-4,-7	-	-	2.598	MINOR
ENSMUSG00000049106	Dcaf5	ENSMUST00000218728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049106	Dcaf5	ENSMUST00000054145	ENSMUSP00000052755	TRANSLATION	protein_coding	-	CCDS26013.1	1	946	0	4.36	3.9	54.6	0	-3,1	-	-	13	PRINCIPAL:1
ENSMUSG00000049106	Dcaf5	ENSMUST00000218498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021131	Erh	ENSMUST00000021559	ENSMUSP00000021559	TRANSLATION	protein_coding	-	CCDS36483.1	1	104	0	3	16.3	154.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021131	Erh	ENSMUST00000218336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021131	Erh	ENSMUST00000218364	ENSMUSP00000151797	TRANSLATION	protein_coding	-	-	3	89	0	2	0	115.8	0	-4,-6	-	-	7.692	MINOR
ENSMUSG00000021131	Erh	ENSMUST00000166931	ENSMUSP00000129620	TRANSLATION	protein_coding	-	CCDS83973.1	2	123	0	3	1.5	154.3	0	-4,-5	-	-	12.132	MINOR
ENSMUSG00000021131	Erh	ENSMUST00000218740	ENSMUSP00000151676	TRANSLATION	protein_coding	-	-	2	71	0	2	0	112.9	0	-4,-6	-	-	7.518	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000221292	ENSMUSP00000152507	TRANSLATION	nonsense_mediated_decay	-	-	3	90	0	0.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000222375	ENSMUSP00000152791	TRANSLATION	protein_coding	-	CCDS26180.1	1	429	4	10.29	5.1	224.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021282	Eif5	ENSMUST00000166123	ENSMUSP00000126825	TRANSLATION	protein_coding	-	CCDS26180.1	1	429	4	10.29	5.1	224.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021282	Eif5	ENSMUST00000050993	ENSMUSP00000061616	TRANSLATION	protein_coding	-	CCDS26180.1	1	429	4	10.29	5.1	224.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021282	Eif5	ENSMUST00000223135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000221363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000222757	ENSMUSP00000152300	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	1.58	0	42.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000220918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000221243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000221648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000221872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000222388	ENSMUSP00000152221	TRANSLATION	protein_coding	-	-	1	375	4	8.46	0	224.9	0	-4,-7	-	-	12.34	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000221101	ENSMUSP00000152135	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0.816	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000220803	ENSMUSP00000152531	TRANSLATION	protein_coding	stop	-	3	34	0	1.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000222441	ENSMUSP00000152534	TRANSLATION	protein_coding	stop	-	3	146	4	3.66	0	146.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021282	Eif5	ENSMUST00000223437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021282	Eif5	ENSMUST00000222234	ENSMUSP00000152459	TRANSLATION	protein_coding	stop	-	1	159	4	4.16	0	146.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000101234	ENSMUSP00000098793	TRANSLATION	protein_coding	stop	-	5	456	0	9.483	1.2	229.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000201767	ENSMUSP00000143829	TRANSLATION	protein_coding	start	-	5	221	0	3.462	0	119.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000161801	ENSMUSP00000125256	TRANSLATION	protein_coding	-	-	1	368	0	6.153	0.5	110.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000202210	ENSMUSP00000143961	TRANSLATION	protein_coding	-	CCDS79132.1	5	472	0	9.983	8.8	229.5	0	-4,-5	-	-	14.076	ALTERNATIVE:1
ENSMUSG00000021219	Rgs6	ENSMUST00000185674	ENSMUSP00000139940	TRANSLATION	protein_coding	-	-	5	453	0	9.645	2.4	183.8	0	-4,-5	-	-	8.193	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000201271	ENSMUSP00000144139	TRANSLATION	protein_coding	stop	-	5	206	0	4.343	0	64.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000200861	ENSMUSP00000144118	TRANSLATION	protein_coding	stop	-	3	109	0	1.968	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000191107	ENSMUSP00000139725	TRANSLATION	protein_coding	-	-	5	505	0	9.945	0	229.5	0	-4,-5	-	-	10.998	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000191352	ENSMUSP00000139718	TRANSLATION	protein_coding	stop	-	5	502	0	9.945	0	229.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000186081	ENSMUSP00000140188	TRANSLATION	nonsense_mediated_decay	-	-	5	465	0	9.681	4.8	229.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000186309	ENSMUSP00000140701	TRANSLATION	protein_coding	-	CCDS79131.1	5	490	0	10.445	7.8	229.5	0	-4,-5	-	-	14.616	ALTERNATIVE:1
ENSMUSG00000021219	Rgs6	ENSMUST00000191311	ENSMUSP00000140723	TRANSLATION	protein_coding	stop	-	5	495	0	9.945	0	229.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000201512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021219	Rgs6	ENSMUST00000201861	ENSMUSP00000144395	TRANSLATION	protein_coding	stop	-	5	88	0	1.368	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000186848	ENSMUSP00000141044	TRANSLATION	protein_coding	-	-	5	437	0	9.635	1.2	229.5	0	-4,-5	-	-	10.458	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000200911	ENSMUSP00000143801	TRANSLATION	protein_coding	-	CCDS79132.1	1	472	0	9.983	8.8	229.5	0	-4,-5	-	-	14.076	PRINCIPAL:3
ENSMUSG00000021219	Rgs6	ENSMUST00000190964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021219	Rgs6	ENSMUST00000186323	ENSMUSP00000141079	TRANSLATION	protein_coding	-	-	5	435	0	9.183	2.4	183.8	0	-4,-5	-	-	7.269	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000201602	ENSMUSP00000144044	TRANSLATION	protein_coding	stop	-	5	72	0	0.708	0	24.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021219	Rgs6	ENSMUST00000185665	ENSMUSP00000139566	TRANSLATION	protein_coding	-	CCDS79131.1	5	490	0	10.445	7.8	229.5	0	-4,-5	-	-	14.616	ALTERNATIVE:1
ENSMUSG00000021219	Rgs6	ENSMUST00000186458	ENSMUSP00000139735	TRANSLATION	protein_coding	-	CCDS79132.1	1	472	0	9.983	8.8	229.5	0	-4,-5	-	-	14.076	PRINCIPAL:3
ENSMUSG00000021219	Rgs6	ENSMUST00000193448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020954	Strn3	ENSMUST00000169503	ENSMUSP00000130184	TRANSLATION	protein_coding	-	CCDS49063.1	1	712	0	5.84	7.5	283.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000020954	Strn3	ENSMUST00000013130	ENSMUSP00000013130	TRANSLATION	protein_coding	-	CCDS36440.1	1	796	0	5.84	6.3	283.8	0	-4,-5	-	-	14.445	PRINCIPAL:3
ENSMUSG00000020954	Strn3	ENSMUST00000218212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021032	Ngb	ENSMUST00000110177	ENSMUSP00000105806	TRANSLATION	protein_coding	-	CCDS79141.1	1	155	19	4	6.3	49.6	0	-4,-7	-	-	20.079	MINOR
ENSMUSG00000021032	Ngb	ENSMUST00000021420	ENSMUSP00000021420	TRANSLATION	protein_coding	-	CCDS36501.1	1	151	19	4	7.5	52.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000021032	Ngb	ENSMUST00000110176	ENSMUSP00000105805	TRANSLATION	protein_coding	-	-	3	92	10	2	0	31.4	0	-4,-7	-	-	5.568	MINOR
ENSMUSG00000071177	Serpina1d	ENSMUST00000078869	ENSMUSP00000077909	TRANSLATION	protein_coding	-	CCDS26139.1	1	413	0	4	0.5	398	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095761	Ighv1-20	ENSMUST00000194968	ENSMUSP00000141859	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	47.1	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000095761	Ighv1-20	ENSMUST00000103506	ENSMUSP00000100287	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.5	0	47.1	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000020672	Sntg2	ENSMUST00000130062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020672	Sntg2	ENSMUST00000142046	ENSMUSP00000115942	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0.24	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020672	Sntg2	ENSMUST00000133324	ENSMUSP00000114245	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0.24	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020672	Sntg2	ENSMUST00000218723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020672	Sntg2	ENSMUST00000156953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020672	Sntg2	ENSMUST00000125530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020672	Sntg2	ENSMUST00000218489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020672	Sntg2	ENSMUST00000149710	ENSMUSP00000123332	TRANSLATION	nonsense_mediated_decay	-	-	1	223	0	3.95	0	55.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000020672	Sntg2	ENSMUST00000021004	ENSMUSP00000021004	TRANSLATION	protein_coding	-	CCDS25858.1	1	539	0	4.84	4.7	55.6	0	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000095565	Ighv2-9-1	ENSMUST00000180013	ENSMUSP00000136606	TRANSLATION	IG_V_gene	stop	-	-	116	6	1	0	52.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000095197	Ighv1-59	ENSMUST00000195359	ENSMUSP00000141949	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	59.6	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000095197	Ighv1-59	ENSMUST00000103530	ENSMUSP00000100311	TRANSLATION	IG_V_gene	stop	-	-	116	8	1.5	0	59.6	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000041886	Macc1	ENSMUST00000222058	ENSMUSP00000152123	TRANSLATION	protein_coding	-	CCDS49199.1	5	851	0	0	1.5	57.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041886	Macc1	ENSMUST00000221866	ENSMUSP00000152883	TRANSLATION	protein_coding	-	CCDS49199.1	5	851	0	0	1.5	57.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041886	Macc1	ENSMUST00000222784	ENSMUSP00000152677	TRANSLATION	protein_coding	-	CCDS49199.1	5	851	0	0	1.5	57.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041886	Macc1	ENSMUST00000048880	ENSMUSP00000042955	TRANSLATION	protein_coding	-	CCDS49199.1	5	851	0	0	1.5	57.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000041886	Macc1	ENSMUST00000221917	ENSMUSP00000152808	TRANSLATION	protein_coding	-	CCDS49199.1	5	851	0	0	1.5	57.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000094951	Ighv5-6	ENSMUST00000103446	ENSMUSP00000100227	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	53.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076432	Ywhaq	ENSMUST00000140710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076432	Ywhaq	ENSMUST00000103002	ENSMUSP00000100067	TRANSLATION	protein_coding	-	CCDS25837.1	1	245	0	4.5	14.8	363.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000076432	Ywhaq	ENSMUST00000146206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076432	Ywhaq	ENSMUST00000155480	ENSMUSP00000117118	TRANSLATION	protein_coding	-	-	1	243	0	4	0	354.6	0	-4,-5	-	-	10.452	MINOR
ENSMUSG00000076432	Ywhaq	ENSMUST00000135088	ENSMUSP00000123605	TRANSLATION	protein_coding	-	CCDS25837.1	1	245	0	4.5	14.8	363.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079017	Ifi27l2a	ENSMUST00000055071	ENSMUSP00000054698	TRANSLATION	protein_coding	-	CCDS49153.1	1	90	0	1.75	0.5	96.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000036144	Meox2	ENSMUST00000041183	ENSMUSP00000043587	TRANSLATION	protein_coding	-	CCDS25888.1	1	303	0	1.42	13.7	79	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000091803	Cox16	ENSMUST00000169124	ENSMUSP00000128281	TRANSLATION	protein_coding	-	-	2	69	0	0	0	48	1	-1,1	-	-	3.756	MINOR
ENSMUSG00000091803	Cox16	ENSMUST00000163282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091803	Cox16	ENSMUST00000171237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091803	Cox16	ENSMUST00000167819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091803	Cox16	ENSMUST00000110340	ENSMUSP00000105969	TRANSLATION	protein_coding	-	CCDS83976.1	1	77	0	0	0.5	51.8	1	-1,1	-	-	4.05	MINOR
ENSMUSG00000091803	Cox16	ENSMUST00000002757	ENSMUSP00000002757	TRANSLATION	protein_coding	-	CCDS26020.1	1	106	0	0	8.8	76.7	1	-1,1	-	-	9	PRINCIPAL:1
ENSMUSG00000091803	Cox16	ENSMUST00000169912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091803	Cox16	ENSMUST00000166723	ENSMUSP00000130935	TRANSLATION	protein_coding	-	CCDS83977.1	2	81	0	0	0.5	48.1	1	-1,1	-	-	3.762	MINOR
ENSMUSG00000091803	Cox16	ENSMUST00000168463	ENSMUSP00000127295	TRANSLATION	protein_coding	-	CCDS83978.1	2	79	0	0	0.5	49	1	-1,1	-	-	3.834	MINOR
ENSMUSG00000062961	Ccdc177	ENSMUST00000073251	ENSMUSP00000072982	TRANSLATION	protein_coding	-	CCDS26015.1	1	706	0	0	1.5	374.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094075	Ighv1-80	ENSMUST00000103547	ENSMUSP00000100328	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	57.6	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021057	Akap5	ENSMUST00000154078	ENSMUSP00000114495	TRANSLATION	protein_coding	-	CCDS49092.1	1	745	0	0	0.5	43.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000021057	Akap5	ENSMUST00000172992	ENSMUSP00000134127	TRANSLATION	protein_coding	-	-	3	752	0	0	0.5	43.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021057	Akap5	ENSMUST00000095610	ENSMUSP00000093270	TRANSLATION	protein_coding	-	-	1	752	0	0	0.5	43.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000010529	Gm266	ENSMUST00000010673	ENSMUSP00000010673	TRANSLATION	protein_coding	-	CCDS26179.1	-	200	15	0.8	2.7	133.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000064215	Ifi27	ENSMUST00000085065	ENSMUSP00000082142	TRANSLATION	protein_coding	-	CCDS36529.1	1	260	0	1.4	0.5	92.5	0	-3,-1	-	-	11.97	ALTERNATIVE:2
ENSMUSG00000064215	Ifi27	ENSMUST00000153670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064215	Ifi27	ENSMUST00000148824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064215	Ifi27	ENSMUST00000076788	ENSMUSP00000076068	TRANSLATION	protein_coding	-	CCDS26132.1	1	165	0	1.4	0.5	92.5	0	-4,-2	-	-	11.97	ALTERNATIVE:2
ENSMUSG00000064215	Ifi27	ENSMUST00000079294	ENSMUSP00000078275	TRANSLATION	protein_coding	-	CCDS36530.1	1	250	0	1.4	0.5	92.5	0	-3,-1	-	-	11.97	ALTERNATIVE:2
ENSMUSG00000064215	Ifi27	ENSMUST00000140838	ENSMUSP00000117403	TRANSLATION	protein_coding	stop	-	1	105	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000064215	Ifi27	ENSMUST00000122905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064215	Ifi27	ENSMUST00000066701	ENSMUSP00000068729	TRANSLATION	protein_coding	-	CCDS26130.1	1	215	0	1.4	0.5	92.5	0	-3,-1	-	-	11.97	PRINCIPAL:4
ENSMUSG00000064215	Ifi27	ENSMUST00000076702	ENSMUSP00000075994	TRANSLATION	protein_coding	-	CCDS26131.1	1	205	0	1.4	0.5	93	0	-3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000071398	2410004P03Rik	ENSMUST00000095823	ENSMUSP00000093503	TRANSLATION	protein_coding	-	CCDS49033.1	1	149	0	0	1.5	29.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000071398	2410004P03Rik	ENSMUST00000190691	ENSMUSP00000140390	TRANSLATION	protein_coding	-	CCDS79107.1	2	205	0	0	0.5	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000071398	2410004P03Rik	ENSMUST00000189479	ENSMUSP00000140028	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	29.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000094552	Ighd3-2	ENSMUST00000179883	ENSMUSP00000141970	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000087075	Lbhd2	ENSMUST00000150384	ENSMUSP00000128648	TRANSLATION	protein_coding	-	CCDS49180.1	1	114	0	0	0.5	41.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094088	Ighv1-64	ENSMUST00000103535	ENSMUSP00000100316	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	60.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000041992	Rapgef5	ENSMUST00000222185	ENSMUSP00000152339	TRANSLATION	protein_coding	-	-	1	580	0	12.1	1	221.3	0	-4,-7	-	-	2.592	MINOR
ENSMUSG00000041992	Rapgef5	ENSMUST00000221225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041992	Rapgef5	ENSMUST00000109691	ENSMUSP00000105313	TRANSLATION	protein_coding	-	CCDS36577.1	1	814	0	16.576	0.5	278.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041992	Rapgef5	ENSMUST00000222105	ENSMUSP00000152875	TRANSLATION	protein_coding	-	-	1	612	0	13.3	0	221.3	0	-4,-7	-	-	2.592	MINOR
ENSMUSG00000041992	Rapgef5	ENSMUST00000223040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041992	Rapgef5	ENSMUST00000222035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041992	Rapgef5	ENSMUST00000220781	ENSMUSP00000152479	TRANSLATION	protein_coding	stop	-	1	359	0	3.61	0	56.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021027	Ralgapa1	ENSMUST00000220017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021027	Ralgapa1	ENSMUST00000110687	ENSMUSP00000106315	TRANSLATION	protein_coding	-	CCDS36452.1	1	2035	0	2.09	5.1	155.6	0	-4,-5	-	-	13.906	PRINCIPAL:2
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219432	ENSMUSP00000151857	TRANSLATION	protein_coding	-	-	5	2082	0	2.09	4.1	155.6	0	-4,-5	-	-	13.442	ALTERNATIVE:2
ENSMUSG00000021027	Ralgapa1	ENSMUST00000226244	ENSMUSP00000154749	TRANSLATION	protein_coding	-	-	-	2538	0	2.09	0	155.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000021027	Ralgapa1	ENSMUST00000220367	ENSMUSP00000151498	TRANSLATION	protein_coding	-	-	5	2082	0	2.09	5.3	155.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219323	ENSMUSP00000151705	TRANSLATION	protein_coding	start	-	3	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219566	ENSMUSP00000151846	TRANSLATION	nonsense_mediated_decay	start	-	3	172	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021027	Ralgapa1	ENSMUST00000219451	ENSMUSP00000151363	TRANSLATION	nonsense_mediated_decay	start	-	3	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021027	Ralgapa1	ENSMUST00000085385	ENSMUSP00000082503	TRANSLATION	protein_coding	-	CCDS36452.1	1	2035	0	2.09	5.1	155.6	0	-4,-5	-	-	13.906	PRINCIPAL:2
ENSMUSG00000061477	Rps7	ENSMUST00000222228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061477	Rps7	ENSMUST00000221871	ENSMUSP00000152456	TRANSLATION	protein_coding	-	CCDS25851.1	1	194	0	5	19.5	312.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061477	Rps7	ENSMUST00000220860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061477	Rps7	ENSMUST00000222808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061477	Rps7	ENSMUST00000223153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061477	Rps7	ENSMUST00000074267	ENSMUSP00000073880	TRANSLATION	protein_coding	-	CCDS25851.1	1	194	0	5	19.5	312.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000061477	Rps7	ENSMUST00000223318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087642	Ighe	ENSMUST00000223335	ENSMUSP00000152628	TRANSLATION	IG_C_gene	start	-	-	486	5	4.04	0	216.8	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000087642	Ighe	ENSMUST00000137336	ENSMUSP00000118012	TRANSLATION	IG_C_gene	start	-	-	422	5	3.04	0	216.8	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000090765	Ighv1-13	ENSMUST00000095364	ENSMUSP00000093010	TRANSLATION	IG_LV_gene	start/stop	-	-	98	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000049882	Vcpkmt	ENSMUST00000238563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049882	Vcpkmt	ENSMUST00000058639	ENSMUSP00000055002	TRANSLATION	protein_coding	-	CCDS36464.1	1	228	13	4.35	5.3	187	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000049882	Vcpkmt	ENSMUST00000238319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049882	Vcpkmt	ENSMUST00000238220	ENSMUSP00000158858	TRANSLATION	nonsense_mediated_decay	-	-	-	93	4	1	0	69	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049882	Vcpkmt	ENSMUST00000238784	ENSMUSP00000158802	TRANSLATION	nonsense_mediated_decay	-	-	-	123	8	1.75	0	106.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056553	Ptprn2	ENSMUST00000190247	ENSMUSP00000139978	TRANSLATION	nonsense_mediated_decay	-	-	1	934	2	7.85	0	322.6	1	3,-2	-	-	-1	MINOR
ENSMUSG00000056553	Ptprn2	ENSMUST00000189009	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056553	Ptprn2	ENSMUST00000070733	ENSMUSP00000064046	TRANSLATION	protein_coding	-	CCDS36576.1	1	1001	11	10.1	0.5	392.8	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000056553	Ptprn2	ENSMUST00000191106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056553	Ptprn2	ENSMUST00000185505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037169	Mycn	ENSMUST00000043396	ENSMUSP00000045993	TRANSLATION	protein_coding	-	CCDS25818.1	1	462	0	1.2	1.5	541.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037169	Mycn	ENSMUST00000130990	ENSMUSP00000114225	TRANSLATION	protein_coding	-	CCDS25818.1	1	462	0	1.2	1.5	541.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037169	Mycn	ENSMUST00000151534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076617	Ighm	ENSMUST00000177715	ENSMUSP00000136807	TRANSLATION	IG_C_gene	start	-	-	476	0	4.6	0	201.1	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000076617	Ighm	ENSMUST00000103426	ENSMUSP00000100222	TRANSLATION	IG_C_gene	start	-	-	455	0	4.5	0	201.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021203	Otub2	ENSMUST00000148371	ENSMUSP00000115673	TRANSLATION	protein_coding	start/stop	-	3	142	0	2.75	0	92.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021203	Otub2	ENSMUST00000021620	ENSMUSP00000021620	TRANSLATION	protein_coding	-	CCDS36528.1	1	234	0	4.75	8.8	254.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021203	Otub2	ENSMUST00000101094	ENSMUSP00000098655	TRANSLATION	protein_coding	-	CCDS49150.1	1	323	0	4.75	0.5	252.8	0	-4,0	-	-	11.91	MINOR
ENSMUSG00000021203	Otub2	ENSMUST00000179684	ENSMUSP00000137162	TRANSLATION	protein_coding	-	CCDS49150.1	5	323	0	4.75	0.5	252.8	0	-4,0	-	-	11.91	MINOR
ENSMUSG00000021203	Otub2	ENSMUST00000141055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095642	Ighv14-3	ENSMUST00000103469	ENSMUSP00000100250	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	53	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094509	Ighv14-1	ENSMUST00000103463	ENSMUSP00000100244	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	52.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000002565	Scin	ENSMUST00000002640	ENSMUSP00000002640	TRANSLATION	protein_coding	-	CCDS49055.1	1	715	28	15.25	6.3	312.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002565	Scin	ENSMUST00000078481	ENSMUSP00000077573	TRANSLATION	protein_coding	-	CCDS25891.1	1	615	27	13.25	0.5	284.3	0	-4,-5	-	-	11.646	MINOR
ENSMUSG00000076620	Ighj2	ENSMUST00000103429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076620	Ighj2	ENSMUST00000192746	ENSMUSP00000141579	TRANSLATION	IG_J_gene	start/stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021115	Vrk1	ENSMUST00000021539	ENSMUSP00000021539	TRANSLATION	protein_coding	-	CCDS36551.1	1	440	0	10.39	0.5	55.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021115	Vrk1	ENSMUST00000085026	ENSMUSP00000082101	TRANSLATION	protein_coding	-	CCDS26157.1	1	416	0	10.39	0.5	55.5	0	-4,-2	-	-	12	PRINCIPAL:4
ENSMUSG00000021115	Vrk1	ENSMUST00000221485	ENSMUSP00000152249	TRANSLATION	protein_coding	stop	-	3	63	0	1.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021115	Vrk1	ENSMUST00000072040	ENSMUSP00000071922	TRANSLATION	protein_coding	-	CCDS26158.1	1	396	0	10.24	1.7	55.5	0	-4,-2	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000021115	Vrk1	ENSMUST00000221312	ENSMUSP00000152721	TRANSLATION	nonsense_mediated_decay	-	-	1	413	0	9.91	0	55.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021115	Vrk1	ENSMUST00000220629	ENSMUSP00000152109	TRANSLATION	protein_coding	-	CCDS36551.1	1	440	0	10.39	0.5	55.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000066364	Serpina3b	ENSMUST00000085052	ENSMUSP00000082127	TRANSLATION	protein_coding	-	CCDS26147.1	1	420	0	3.8	0.5	358.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000015143	Actn1	ENSMUST00000218874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015143	Actn1	ENSMUST00000217984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015143	Actn1	ENSMUST00000167327	ENSMUSP00000127176	TRANSLATION	protein_coding	-	CCDS83972.1	1	887	0	19.5	14	519.1	0	-4,-5	-	-	16	MINOR
ENSMUSG00000015143	Actn1	ENSMUST00000219634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015143	Actn1	ENSMUST00000219382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015143	Actn1	ENSMUST00000220351	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015143	Actn1	ENSMUST00000021554	ENSMUSP00000021554	TRANSLATION	protein_coding	-	CCDS26011.1	1	892	5	19.5	13.8	519.1	0	-4,-5	-	-	20.94	PRINCIPAL:1
ENSMUSG00000076613	Ighg2b	ENSMUST00000192188	ENSMUSP00000141198	TRANSLATION	IG_C_gene	start	-	-	405	5	4.45	0	218.3	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000076613	Ighg2b	ENSMUST00000103418	ENSMUSP00000100214	TRANSLATION	IG_C_gene	start	-	-	336	5	3.45	0	218.3	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000049792	Bag5	ENSMUST00000162953	ENSMUSP00000124861	TRANSLATION	protein_coding	stop	-	3	37	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049792	Bag5	ENSMUST00000160825	ENSMUSP00000123839	TRANSLATION	protein_coding	stop	-	3	59	0	1.75	0	34.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049792	Bag5	ENSMUST00000054636	ENSMUSP00000051049	TRANSLATION	protein_coding	-	CCDS26185.1	1	447	0	2.35	7.6	175.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049792	Bag5	ENSMUST00000160576	ENSMUSP00000125183	TRANSLATION	protein_coding	-	CCDS26185.1	1	447	0	2.35	7.6	175.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034574	Daam1	ENSMUST00000085299	ENSMUSP00000082406	TRANSLATION	protein_coding	-	CCDS25964.1	1	1077	0	16.604	5.3	775.3	0	-4,-1	-	-	13.088	PRINCIPAL:2
ENSMUSG00000034574	Daam1	ENSMUST00000221317	ENSMUSP00000152532	TRANSLATION	protein_coding	-	-	1	1068	0	16.34	6.3	784.2	0	-4,-1	-	-	13.472	ALTERNATIVE:1
ENSMUSG00000034574	Daam1	ENSMUST00000221971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034574	Daam1	ENSMUST00000223272	ENSMUSP00000152564	TRANSLATION	protein_coding	-	CCDS25964.1	1	1077	0	16.604	5.3	775.3	0	-4,-1	-	-	13.088	PRINCIPAL:2
ENSMUSG00000034574	Daam1	ENSMUST00000222327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043061	Tmem18	ENSMUST00000057151	ENSMUSP00000050729	TRANSLATION	protein_coding	-	CCDS49043.1	1	140	0	0	1.7	156.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043061	Tmem18	ENSMUST00000218826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096649	Ighv1-31	ENSMUST00000103511	ENSMUSP00000100292	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	55.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096649	Ighv1-31	ENSMUST00000195735	ENSMUSP00000141586	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	55.7	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096767	Ighv1-62-3	ENSMUST00000103532	ENSMUSP00000100313	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	50.2	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000094028	Ighd4-1	ENSMUST00000179520	ENSMUSP00000142153	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000020653	Klf11	ENSMUST00000020982	ENSMUSP00000020982	TRANSLATION	protein_coding	-	CCDS25842.1	1	502	12	1	1.5	65.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000020653	Klf11	ENSMUST00000146894	ENSMUSP00000115340	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020653	Klf11	ENSMUST00000144046	ENSMUSP00000121730	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020653	Klf11	ENSMUST00000139940	ENSMUSP00000118623	TRANSLATION	protein_coding	stop	-	2	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011158	Brf1	ENSMUST00000222247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011158	Brf1	ENSMUST00000221409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011158	Brf1	ENSMUST00000221754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011158	Brf1	ENSMUST00000011302	ENSMUSP00000011302	TRANSLATION	protein_coding	-	CCDS49195.1	5	676	4	3.648	1.5	255	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000011158	Brf1	ENSMUST00000221680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011158	Brf1	ENSMUST00000223037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011158	Brf1	ENSMUST00000221537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011158	Brf1	ENSMUST00000223506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011158	Brf1	ENSMUST00000221415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048833	Slc39a9	ENSMUST00000219706	ENSMUSP00000151451	TRANSLATION	protein_coding	-	-	1	263	0	0	0	77.6	5	-2,-5	-	-	4.734	MINOR
ENSMUSG00000048833	Slc39a9	ENSMUST00000217889	ENSMUSP00000151396	TRANSLATION	protein_coding	-	-	1	261	0	0	0	56.7	7	-2,-5	-	-	3.456	MINOR
ENSMUSG00000048833	Slc39a9	ENSMUST00000217805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048833	Slc39a9	ENSMUST00000219405	ENSMUSP00000151781	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048833	Slc39a9	ENSMUST00000219689	ENSMUSP00000151869	TRANSLATION	protein_coding	start	-	3	115	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048833	Slc39a9	ENSMUST00000218440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048833	Slc39a9	ENSMUST00000085245	ENSMUSP00000082343	TRANSLATION	protein_coding	-	CCDS49099.1	1	308	0	0	11.6	98.4	9	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000048833	Slc39a9	ENSMUST00000217679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037686	Aspg	ENSMUST00000079400	ENSMUSP00000078369	TRANSLATION	protein_coding	-	CCDS36567.1	1	564	18	14.39	1.5	248.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037686	Aspg	ENSMUST00000222970	ENSMUSP00000152762	TRANSLATION	protein_coding	start	-	1	156	3	2.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037686	Aspg	ENSMUST00000221091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037686	Aspg	ENSMUST00000222645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037686	Aspg	ENSMUST00000223412	ENSMUSP00000152155	TRANSLATION	protein_coding	start/stop	-	3	179	7	5.24	0	99.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037686	Aspg	ENSMUST00000220719	ENSMUSP00000152630	TRANSLATION	nonsense_mediated_decay	start	-	3	68	2	1.816	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037686	Aspg	ENSMUST00000223457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037686	Aspg	ENSMUST00000223184	ENSMUSP00000152728	TRANSLATION	nonsense_mediated_decay	start	-	3	103	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063129	Aldoart2	ENSMUST00000080123	ENSMUSP00000079022	TRANSLATION	protein_coding	-	CCDS70384.1	-	364	19	1	10.8	619.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000094087	Ighv1-61	ENSMUST00000103531	ENSMUSP00000100312	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	58.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000020642	Rnf144a	ENSMUST00000223137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020642	Rnf144a	ENSMUST00000220742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020642	Rnf144a	ENSMUST00000222082	ENSMUSP00000152807	TRANSLATION	protein_coding	stop	-	3	132	10	3.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020642	Rnf144a	ENSMUST00000020971	ENSMUSP00000020971	TRANSLATION	protein_coding	-	CCDS36425.1	1	292	23	4.53	14.5	83.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000020642	Rnf144a	ENSMUST00000222505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020642	Rnf144a	ENSMUST00000221994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020642	Rnf144a	ENSMUST00000062149	ENSMUSP00000056073	TRANSLATION	protein_coding	-	CCDS36425.1	1	292	23	4.53	14.5	83.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000066643	Wdr35	ENSMUST00000159126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066643	Wdr35	ENSMUST00000160873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066643	Wdr35	ENSMUST00000111113	ENSMUSP00000106742	TRANSLATION	protein_coding	-	CCDS49027.1	1	1170	0	2.138	9.5	39.7	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000066643	Wdr35	ENSMUST00000159735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066643	Wdr35	ENSMUST00000160329	ENSMUSP00000124285	TRANSLATION	nonsense_mediated_decay	-	-	1	186	0	1.778	0	13.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066643	Wdr35	ENSMUST00000161019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066643	Wdr35	ENSMUST00000085745	ENSMUSP00000082895	TRANSLATION	protein_coding	-	CCDS25807.1	1	1181	0	2.138	9.5	39.7	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000034892	Rps29	ENSMUST00000094291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034892	Rps29	ENSMUST00000037023	ENSMUSP00000038352	TRANSLATION	protein_coding	-	CCDS36461.1	1	56	4	1.75	19.5	55.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000020652	Cenpo	ENSMUST00000146261	ENSMUSP00000116539	TRANSLATION	protein_coding	start	-	3	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020652	Cenpo	ENSMUST00000128466	ENSMUSP00000121258	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	24.9	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000020652	Cenpo	ENSMUST00000146523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020652	Cenpo	ENSMUST00000111169	ENSMUSP00000106799	TRANSLATION	protein_coding	-	-	1	205	0	0	0.5	24.5	0	-4,-5	-	-	5.7	ALTERNATIVE:2
ENSMUSG00000020652	Cenpo	ENSMUST00000020981	ENSMUSP00000020981	TRANSLATION	protein_coding	-	-	1	177	0	0	0	25.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000020652	Cenpo	ENSMUST00000126017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020652	Cenpo	ENSMUST00000140975	ENSMUSP00000119136	TRANSLATION	protein_coding	-	CCDS25788.1	1	298	0	0	1.5	25.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000004151	Etv1	ENSMUST00000220492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004151	Etv1	ENSMUST00000162730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004151	Etv1	ENSMUST00000159334	ENSMUSP00000125676	TRANSLATION	protein_coding	-	CCDS49054.1	1	437	0	3	13.5	494.7	0	-4,-5	-	-	10	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000160856	ENSMUSP00000125692	TRANSLATION	protein_coding	-	CCDS83959.1	5	459	0	3	8.1	544.6	0	-4,-5	-	-	10	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000161164	ENSMUSP00000124650	TRANSLATION	protein_coding	stop	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000160701	ENSMUSP00000124019	TRANSLATION	protein_coding	-	-	5	374	0	3	2.4	438.2	0	-4,-5	-	-	6.448	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000162563	ENSMUSP00000125157	TRANSLATION	protein_coding	-	CCDS49053.1	5	477	0	3	13.5	615.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000004151	Etv1	ENSMUST00000161513	ENSMUSP00000124166	TRANSLATION	protein_coding	stop	-	5	249	0	0	0	292.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000161591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004151	Etv1	ENSMUST00000160244	ENSMUSP00000125733	TRANSLATION	protein_coding	-	-	5	454	0	3	3.4	567.2	0	-4,-5	-	-	9.852	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000161980	ENSMUSP00000124736	TRANSLATION	protein_coding	-	-	5	419	0	3	3.7	457.8	0	-4,-6	-	-	6.864	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000160996	ENSMUSP00000124705	TRANSLATION	protein_coding	stop	-	3	230	0	0	0	266.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004151	Etv1	ENSMUST00000095767	ENSMUSP00000093442	TRANSLATION	protein_coding	-	CCDS49053.1	1	477	0	3	13.5	615.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021264	Yy1	ENSMUST00000126912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021264	Yy1	ENSMUST00000021692	ENSMUSP00000021692	TRANSLATION	protein_coding	-	CCDS26163.1	1	414	16	3.15	0.5	61.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000014905	Dnajb9	ENSMUST00000015049	ENSMUSP00000015049	TRANSLATION	protein_coding	-	CCDS25897.1	1	222	0	2.15	7.5	93	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000014905	Dnajb9	ENSMUST00000220421	ENSMUSP00000152011	TRANSLATION	protein_coding	stop	-	2	52	0	1	0	33.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000044408	Sptssa	ENSMUST00000220090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044408	Sptssa	ENSMUST00000056228	ENSMUSP00000053671	TRANSLATION	protein_coding	-	CCDS36445.1	1	71	0	0	16.9	73.5	2	-2,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000044408	Sptssa	ENSMUST00000218147	ENSMUSP00000151214	TRANSLATION	nonsense_mediated_decay	-	-	5	74	0	0	0	45.2	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000021189	Atxn3	ENSMUST00000161011	ENSMUSP00000125378	TRANSLATION	protein_coding	-	CCDS49144.1	1	291	0	6.15	1.5	279.7	0	-4,-5	-	-	5.982	MINOR
ENSMUSG00000021189	Atxn3	ENSMUST00000159883	ENSMUSP00000124419	TRANSLATION	protein_coding	start	-	5	287	0	6	1.5	277.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021189	Atxn3	ENSMUST00000160186	ENSMUSP00000124178	TRANSLATION	nonsense_mediated_decay	start	-	5	69	0	1	0	95.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021189	Atxn3	ENSMUST00000160251	ENSMUSP00000125082	TRANSLATION	protein_coding	-	-	1	296	0	6.15	0	225.5	0	-4,-5	-	-	3	MINOR
ENSMUSG00000021189	Atxn3	ENSMUST00000021606	ENSMUSP00000021606	TRANSLATION	protein_coding	-	CCDS26115.1	1	355	0	7.65	1.5	330	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021245	Mlh3	ENSMUST00000223005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021245	Mlh3	ENSMUST00000223230	ENSMUSP00000152686	TRANSLATION	nonsense_mediated_decay	start	-	1	197	0	0.66	0	24.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021245	Mlh3	ENSMUST00000019378	ENSMUSP00000019378	TRANSLATION	protein_coding	-	CCDS36497.1	1	1411	10	2.038	0.5	115.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000021245	Mlh3	ENSMUST00000166821	ENSMUSP00000129900	TRANSLATION	protein_coding	-	CCDS36497.1	1	1411	10	2.038	0.5	115.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000021245	Mlh3	ENSMUST00000220854	ENSMUSP00000152840	TRANSLATION	protein_coding	-	-	5	1443	10	2.038	0.5	115.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000042320	Prox2	ENSMUST00000221003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042320	Prox2	ENSMUST00000191324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042320	Prox2	ENSMUST00000110249	ENSMUSP00000105878	TRANSLATION	protein_coding	-	CCDS36495.1	1	593	0	3	1.5	262.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042320	Prox2	ENSMUST00000177289	ENSMUSP00000135881	TRANSLATION	protein_coding	-	CCDS36495.1	1	593	0	3	1.5	262.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021134	Srsf5	ENSMUST00000133783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021134	Srsf5	ENSMUST00000138434	ENSMUSP00000138632	TRANSLATION	nonsense_mediated_decay	-	-	3	46	0	1	0	34.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021134	Srsf5	ENSMUST00000110351	ENSMUSP00000105980	TRANSLATION	protein_coding	-	CCDS83974.1	1	270	0	4.295	0.5	104.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021134	Srsf5	ENSMUST00000151036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021134	Srsf5	ENSMUST00000110352	ENSMUSP00000105981	TRANSLATION	protein_coding	-	CCDS36484.1	1	269	0	4.295	1.5	104.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000021134	Srsf5	ENSMUST00000094693	ENSMUSP00000131323	TRANSLATION	protein_coding	-	CCDS36484.1	1	269	0	4.295	1.5	104.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000021134	Srsf5	ENSMUST00000151968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021134	Srsf5	ENSMUST00000152662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021134	Srsf5	ENSMUST00000153056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021134	Srsf5	ENSMUST00000125814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021134	Srsf5	ENSMUST00000110354	ENSMUSP00000105983	TRANSLATION	protein_coding	-	CCDS83974.1	5	270	0	4.295	0.5	104.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021134	Srsf5	ENSMUST00000110356	ENSMUSP00000105985	TRANSLATION	protein_coding	-	CCDS36484.1	5	269	0	4.295	1.5	104.3	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000102364	Ighv8-5	ENSMUST00000194257	ENSMUSP00000142292	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.2	0	54.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000103203	Gm37327	ENSMUST00000193012	ENSMUSP00000142226	TRANSLATION	IG_D_gene	start/stop	-	-	9	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000002020	Ltbp2	ENSMUST00000163189	ENSMUSP00000127693	TRANSLATION	protein_coding	-	-	1	1766	108	18.963	0	732.3	0	2,2	-	-	13.242	MINOR
ENSMUSG00000002020	Ltbp2	ENSMUST00000163214	ENSMUSP00000132067	TRANSLATION	protein_coding	start/stop	-	5	307	35	5.834	0	205.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002020	Ltbp2	ENSMUST00000168699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002020	Ltbp2	ENSMUST00000002073	ENSMUSP00000002073	TRANSLATION	protein_coding	-	-	5	1809	111	19.523	0	759.6	0	2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000002020	Ltbp2	ENSMUST00000166383	ENSMUSP00000127255	TRANSLATION	protein_coding	start/stop	-	3	204	6	2.33	0	83.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002020	Ltbp2	ENSMUST00000110254	ENSMUSP00000105883	TRANSLATION	protein_coding	-	CCDS49112.1	1	1786	108	18.963	0.5	732.3	0	-3,1	-	-	13.242	MINOR
ENSMUSG00000002020	Ltbp2	ENSMUST00000165141	ENSMUSP00000132690	TRANSLATION	protein_coding	start/stop	-	5	183	35	4.19	0	172.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112187	Gm6993	ENSMUST00000219110	ENSMUSP00000151468	TRANSLATION	protein_coding	-	-	-	69	0	0	5.2	33.3	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000051367	Six1	ENSMUST00000050029	ENSMUSP00000059026	TRANSLATION	protein_coding	-	CCDS25973.1	1	284	2	1	17.5	217.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000051367	Six1	ENSMUST00000176091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051367	Six1	ENSMUST00000176310	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051367	Six1	ENSMUST00000175677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072849	Serpina1e	ENSMUST00000122229	ENSMUSP00000113606	TRANSLATION	protein_coding	-	CCDS26142.1	1	413	0	4	0.5	390.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000072849	Serpina1e	ENSMUST00000085054	ENSMUSP00000082130	TRANSLATION	protein_coding	-	CCDS26142.1	1	413	0	4	0.5	390.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000221912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000163095	ENSMUSP00000129654	TRANSLATION	protein_coding	-	CCDS49142.1	5	833	0	2.5	7.6	270.3	0	-4,-6	-	-	13.884	MINOR
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000223091	ENSMUSP00000152738	TRANSLATION	nonsense_mediated_decay	start	-	5	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000222956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000223161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000223459	ENSMUSP00000152417	TRANSLATION	protein_coding	start/stop	-	2	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000222302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041846	Ppp4r3a	ENSMUST00000048305	ENSMUSP00000041667	TRANSLATION	protein_coding	-	CCDS26111.1	1	820	0	2.5	15	270.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000096638	Ighv2-9	ENSMUST00000103451	ENSMUSP00000100232	TRANSLATION	IG_V_gene	stop	-	-	116	3	1	0	51.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000043998	Mgat2	ENSMUST00000060579	ENSMUSP00000057905	TRANSLATION	protein_coding	-	CCDS25947.1	-	442	0	0	1.5	511.5	0	-1,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000020973	Dnaaf2	ENSMUST00000021356	ENSMUSP00000021356	TRANSLATION	protein_coding	-	CCDS25948.1	1	814	0	0	0.5	324.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000118552	AC124742.1	ENSMUST00000238938	ENSMUSP00000158993	TRANSLATION	protein_coding	-	-	-	115	0	1	13.7	89.8	0	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000093876	Ighd5-3	ENSMUST00000179262	ENSMUSP00000141703	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000085925	Rtl1	ENSMUST00000149046	ENSMUSP00000115957	TRANSLATION	protein_coding	-	CCDS26170.1	1	1744	1	0	0.5	42.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054383	Pnma1	ENSMUST00000061425	ENSMUSP00000060783	TRANSLATION	protein_coding	-	CCDS26040.1	-	353	0	0	7.5	441.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000037904	Ankrd9	ENSMUST00000043459	ENSMUSP00000048823	TRANSLATION	protein_coding	-	CCDS26174.1	1	326	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000037904	Ankrd9	ENSMUST00000128353	ENSMUSP00000120816	TRANSLATION	protein_coding	-	CCDS26174.1	1	326	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000037904	Ankrd9	ENSMUST00000144882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037904	Ankrd9	ENSMUST00000140788	ENSMUSP00000121279	TRANSLATION	protein_coding	-	CCDS26174.1	3	326	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000037904	Ankrd9	ENSMUST00000142012	ENSMUSP00000121536	TRANSLATION	protein_coding	-	-	5	359	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000037904	Ankrd9	ENSMUST00000148765	ENSMUSP00000123239	TRANSLATION	protein_coding	-	CCDS26174.1	2	326	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000037904	Ankrd9	ENSMUST00000135131	ENSMUSP00000119339	TRANSLATION	protein_coding	-	CCDS26174.1	1	326	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000021024	Psma6	ENSMUST00000163070	ENSMUSP00000124781	TRANSLATION	protein_coding	-	CCDS79114.1	5	227	0	5.25	6.3	182.4	0	-4,-2	-	-	8.284	MINOR
ENSMUSG00000021024	Psma6	ENSMUST00000162972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021024	Psma6	ENSMUST00000021412	ENSMUSP00000021412	TRANSLATION	protein_coding	-	CCDS25917.1	1	246	0	6	21.5	236.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021024	Psma6	ENSMUST00000162711	ENSMUSP00000123914	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0.75	0	37.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021095	Gsc	ENSMUST00000021513	ENSMUSP00000021513	TRANSLATION	protein_coding	-	CCDS26153.1	1	256	0	1.6	5.1	79.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000021139	Gm20498	ENSMUST00000166664	ENSMUSP00000131728	TRANSLATION	protein_coding,RT	-	CCDS83981.1	2	182	0	3.02	1.7	135.3	0	-4,-5	-	-	-1	PRINCIPAL:4
ENSMUSG00000021139	Gm20498	ENSMUST00000110339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021139	Gm20498	ENSMUST00000164386	ENSMUSP00000132941	TRANSLATION	protein_coding,RT	-	CCDS83980.1	2	153	0	3.02	0.5	109.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021139	Gm20498	ENSMUST00000171459	ENSMUSP00000133042	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	40	0	0.75	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021139	Gm20498	ENSMUST00000168961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021139	Gm20498	ENSMUST00000170958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055917	Zfp277	ENSMUST00000221604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055917	Zfp277	ENSMUST00000221847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055917	Zfp277	ENSMUST00000069637	ENSMUSP00000068032	TRANSLATION	protein_coding	-	CCDS25894.1	1	457	15	0.74	0.5	170	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000055917	Zfp277	ENSMUST00000222394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055917	Zfp277	ENSMUST00000069692	ENSMUSP00000064226	TRANSLATION	protein_coding	-	CCDS36435.1	1	583	15	0.74	0.5	170	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000035142	Nubpl	ENSMUST00000159567	ENSMUSP00000125177	TRANSLATION	nonsense_mediated_decay	start	-	3	138	0	2.3	0	80.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035142	Nubpl	ENSMUST00000159485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035142	Nubpl	ENSMUST00000159708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035142	Nubpl	ENSMUST00000040090	ENSMUSP00000044292	TRANSLATION	protein_coding	-	CCDS36442.2	1	319	11	6.548	5.1	331.5	0	1,3	-	-	20	PRINCIPAL:1
ENSMUSG00000035142	Nubpl	ENSMUST00000162111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048856	Slc25a47	ENSMUST00000221080	ENSMUSP00000152260	TRANSLATION	protein_coding	-	-	1	219	0	1.795	0	129.1	0	-3,-6	-	-	5.508	MINOR
ENSMUSG00000048856	Slc25a47	ENSMUST00000057026	ENSMUSP00000050329	TRANSLATION	protein_coding	-	CCDS26165.1	1	310	0	2.595	3.9	206.5	0	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000048856	Slc25a47	ENSMUST00000223296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048856	Slc25a47	ENSMUST00000221453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048856	Slc25a47	ENSMUST00000221787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000113951	Gm2001	ENSMUST00000223236	ENSMUSP00000152093	TRANSLATION	protein_coding	-	-	-	73	0	1	19.5	25.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034271	Jdp2	ENSMUST00000171754	ENSMUSP00000129985	TRANSLATION	protein_coding	-	CCDS26060.1	1	163	0	1.4	12.8	39.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034271	Jdp2	ENSMUST00000222689	ENSMUSP00000152652	TRANSLATION	protein_coding	stop	-	3	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034271	Jdp2	ENSMUST00000050687	ENSMUSP00000059724	TRANSLATION	protein_coding	-	CCDS26060.1	1	163	0	1.4	12.8	39.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034271	Jdp2	ENSMUST00000177587	ENSMUSP00000136823	TRANSLATION	protein_coding	-	CCDS26060.1	1	163	0	1.4	12.8	39.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000095592	Ighd5-7	ENSMUST00000178483	ENSMUSP00000141202	TRANSLATION	IG_D_gene	start/stop	-	-	9	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076680	Ighv6-6	ENSMUST00000103489	ENSMUSP00000100270	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.5	0	53.6	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000055884	Fancm	ENSMUST00000223051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055884	Fancm	ENSMUST00000221937	ENSMUSP00000152885	TRANSLATION	protein_coding	start/stop	-	5	109	0	1.29	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055884	Fancm	ENSMUST00000222521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055884	Fancm	ENSMUST00000223401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055884	Fancm	ENSMUST00000221838	ENSMUSP00000152396	TRANSLATION	protein_coding	start/stop	-	3	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055884	Fancm	ENSMUST00000222540	ENSMUSP00000152854	TRANSLATION	nonsense_mediated_decay	-	-	1	664	7	6.36	0.5	134.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000055884	Fancm	ENSMUST00000222086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055884	Fancm	ENSMUST00000221175	ENSMUSP00000152223	TRANSLATION	protein_coding	start	-	5	121	0	1	0	28.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055884	Fancm	ENSMUST00000058889	ENSMUSP00000054797	TRANSLATION	protein_coding	-	CCDS25941.1	1	2021	7	11.49	0.5	324.6	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000095285	Ighv5-9	ENSMUST00000103448	ENSMUSP00000100229	TRANSLATION	IG_V_gene	stop	-	-	117	10	1.5	0	51.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021094	Dhrs7	ENSMUST00000021512	ENSMUSP00000021512	TRANSLATION	protein_coding	-	CCDS49086.1	1	338	28	4	1.5	170.9	0	2,-2	-	-	17.52	PRINCIPAL:1
ENSMUSG00000021094	Dhrs7	ENSMUST00000220821	ENSMUSP00000152329	TRANSLATION	nonsense_mediated_decay	-	-	5	96	8	1.2	0	30.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000021094	Dhrs7	ENSMUST00000221674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021094	Dhrs7	ENSMUST00000221750	ENSMUSP00000152198	TRANSLATION	protein_coding	start	-	5	362	28	4.24	0	161.3	0	2,-2	-	-	-1	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000220557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021071	Trim9	ENSMUST00000222316	ENSMUSP00000152147	TRANSLATION	protein_coding	-	-	2	817	24	4.298	0	140.4	0	-4,-5	-	-	17.874	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000222603	ENSMUSP00000159335	TRANSLATION	protein_coding	-	-	2	550	24	3	2.4	90.2	0	-4,-5	-	-	12.759	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000110522	ENSMUSP00000106151	TRANSLATION	protein_coding	-	CCDS49078.1	1	788	24	4.148	1.5	120.7	0	-4,-5	-	-	16.569	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000223160	ENSMUSP00000152887	TRANSLATION	protein_coding	-	-	5	710	24	4.25	9.5	142.5	0	-4,-5	-	-	20.904	PRINCIPAL:1
ENSMUSG00000021071	Trim9	ENSMUST00000221306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021071	Trim9	ENSMUST00000221294	ENSMUSP00000152691	TRANSLATION	protein_coding	start	-	1	772	19	3.398	0	90.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000110520	ENSMUSP00000106149	TRANSLATION	protein_coding	-	CCDS49077.1	1	714	24	4.148	3.9	120.9	0	-4,-5	-	-	17.427	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000167755	ENSMUSP00000127081	TRANSLATION	protein_coding	-	CCDS49079.1	1	547	24	3	0.5	90.2	0	-4,-5	-	-	12.264	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000223518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021071	Trim9	ENSMUST00000221370	ENSMUSP00000152692	TRANSLATION	protein_coding	-	-	1	536	24	3	0.5	90.2	0	-4,-5	-	-	12.264	MINOR
ENSMUSG00000021071	Trim9	ENSMUST00000221041	ENSMUSP00000152496	TRANSLATION	protein_coding	-	-	1	565	24	3	0	90.2	0	-4,-5	-	-	12.264	MINOR
ENSMUSG00000054150	Syne3	ENSMUST00000095439	ENSMUSP00000093090	TRANSLATION	protein_coding	-	CCDS36542.1	1	975	0	0	1.5	133.8	1	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000054150	Syne3	ENSMUST00000067005	ENSMUSP00000065771	TRANSLATION	protein_coding	-	CCDS36543.1	1	888	0	0	0.5	133.8	1	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000054150	Syne3	ENSMUST00000109927	ENSMUSP00000105553	TRANSLATION	protein_coding	-	CCDS36543.1	5	888	0	0	0.5	133.8	1	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000052160	Pld4	ENSMUST00000221811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052160	Pld4	ENSMUST00000063888	ENSMUSP00000067002	TRANSLATION	protein_coding	-	CCDS26195.1	1	503	0	0	0.5	102.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000052160	Pld4	ENSMUST00000222886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052160	Pld4	ENSMUST00000221115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052160	Pld4	ENSMUST00000220826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058669	Nkx2-9	ENSMUST00000072631	ENSMUSP00000072425	TRANSLATION	protein_coding	-	CCDS25923.1	1	235	0	0.6	1.5	68.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021223	Papln	ENSMUST00000152904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021223	Papln	ENSMUST00000021646	ENSMUSP00000021646	TRANSLATION	protein_coding	-	CCDS26031.1	1	1280	3	10.25	0.5	624.1	0	4,-1	-	-	15	PRINCIPAL:3
ENSMUSG00000021223	Papln	ENSMUST00000121733	ENSMUSP00000113806	TRANSLATION	protein_coding	-	CCDS56847.1	1	1302	3	10.25	0.5	624.1	0	4,-1	-	-	15	ALTERNATIVE:2
ENSMUSG00000011148	Adssl1	ENSMUST00000223044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011148	Adssl1	ENSMUST00000221720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011148	Adssl1	ENSMUST00000180015	ENSMUSP00000136572	TRANSLATION	protein_coding	-	-	1	480	18	10.875	0	579.5	0	-4,-7	-	-	15.792	MINOR
ENSMUSG00000011148	Adssl1	ENSMUST00000021726	ENSMUSP00000021726	TRANSLATION	protein_coding	-	CCDS26192.1	1	457	18	11.25	7.6	603.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000020633	Dcdc2c	ENSMUST00000221349	ENSMUSP00000152233	TRANSLATION	protein_coding	-	-	5	376	0	3.1	1.5	117.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000020633	Dcdc2c	ENSMUST00000186301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020633	Dcdc2c	ENSMUST00000189747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020633	Dcdc2c	ENSMUST00000189735	ENSMUSP00000140603	TRANSLATION	protein_coding	-	CCDS79109.1	1	179	0	1.08	0.5	31.8	0	-4,-5	-	-	2.838	MINOR
ENSMUSG00000020633	Dcdc2c	ENSMUST00000020963	ENSMUSP00000020963	TRANSLATION	protein_coding	stop	-	5	347	0	3.1	0	117.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020633	Dcdc2c	ENSMUST00000185916	ENSMUSP00000152188	TRANSLATION	protein_coding	start	-	5	622	0	2.46	0	41.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094862	Ighv1-56	ENSMUST00000194071	ENSMUSP00000141979	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	55.6	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094862	Ighv1-56	ENSMUST00000103527	ENSMUSP00000100308	TRANSLATION	IG_V_gene	start/stop	-	-	98	9	1	0	55.6	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021003	Galc	ENSMUST00000222703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021003	Galc	ENSMUST00000021390	ENSMUSP00000021390	TRANSLATION	protein_coding	-	CCDS36517.1	1	684	15	15.5	0.5	640.4	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000021003	Galc	ENSMUST00000222042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021003	Galc	ENSMUST00000221322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021003	Galc	ENSMUST00000220501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021003	Galc	ENSMUST00000222379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021003	Galc	ENSMUST00000221063	ENSMUSP00000152540	TRANSLATION	protein_coding	start	-	1	491	10	10.8	0	288.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021253	Tgfb3	ENSMUST00000003687	ENSMUSP00000003687	TRANSLATION	protein_coding	-	CCDS49116.1	1	412	0	4.54	8.4	210	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000095923	Ighv1-37	ENSMUST00000103514	ENSMUSP00000100295	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.5	0	44.6	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095923	Ighv1-37	ENSMUST00000193950	ENSMUSP00000141375	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	44.6	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000079007	Tcl1b4	ENSMUST00000222867	ENSMUSP00000152596	TRANSLATION	protein_coding	-	-	1	121	0	1.3	0.5	139.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000079007	Tcl1b4	ENSMUST00000000718	ENSMUSP00000000718	TRANSLATION	protein_coding	-	CCDS36548.1	1	120	0	1.2	0.5	139.7	0	-4,-7	-	-	11.538	PRINCIPAL:2
ENSMUSG00000001497	Pax9	ENSMUST00000152848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001497	Pax9	ENSMUST00000153250	ENSMUSP00000117928	TRANSLATION	protein_coding	-	CCDS25924.1	5	342	0	1	10.8	238	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000001497	Pax9	ENSMUST00000001538	ENSMUSP00000001538	TRANSLATION	protein_coding	-	CCDS25924.1	1	342	0	1	10.8	238	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000094103	Fam177a2	ENSMUST00000177978	ENSMUSP00000137377	TRANSLATION	protein_coding	-	CCDS49066.1	1	207	0	0	1.5	154.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021234	Fam161b	ENSMUST00000126752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021234	Fam161b	ENSMUST00000065536	ENSMUSP00000070407	TRANSLATION	protein_coding	-	CCDS26043.1	1	589	0	0	0.5	362.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021234	Fam161b	ENSMUST00000133230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021234	Fam161b	ENSMUST00000021659	ENSMUSP00000021659	TRANSLATION	protein_coding	-	CCDS26043.1	1	589	0	0	0.5	362.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020593	Lpin1	ENSMUST00000221789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020593	Lpin1	ENSMUST00000111067	ENSMUSP00000106696	TRANSLATION	protein_coding	-	CCDS25822.1	1	924	8	0	1.5	610.8	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000020593	Lpin1	ENSMUST00000221146	ENSMUSP00000152209	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	155.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020593	Lpin1	ENSMUST00000221230	ENSMUSP00000152466	TRANSLATION	protein_coding	-	CCDS25823.1	1	891	8	0	0.5	610.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020593	Lpin1	ENSMUST00000222989	ENSMUSP00000152276	TRANSLATION	protein_coding	-	CCDS25823.1	1	891	8	0	0.5	610.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020593	Lpin1	ENSMUST00000238839	ENSMUSP00000158955	TRANSLATION	protein_coding	-	-	-	973	8	0	1	610.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020593	Lpin1	ENSMUST00000067124	ENSMUSP00000070583	TRANSLATION	protein_coding	-	CCDS25822.1	1	924	8	0	1.5	610.8	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000020593	Lpin1	ENSMUST00000239165	ENSMUSP00000159076	TRANSLATION	protein_coding	-	-	-	950	8	0	0.5	599.8	0	-4,-6	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000020593	Lpin1	ENSMUST00000221297	ENSMUSP00000152285	TRANSLATION	protein_coding	-	CCDS25822.1	5	924	8	0	1.5	610.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020593	Lpin1	ENSMUST00000223129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021287	Xrcc3	ENSMUST00000132177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021287	Xrcc3	ENSMUST00000124064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021287	Xrcc3	ENSMUST00000133679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021287	Xrcc3	ENSMUST00000127281	ENSMUSP00000118040	TRANSLATION	nonsense_mediated_decay	-	-	1	215	7	2.455	0	68.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021287	Xrcc3	ENSMUST00000129258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021287	Xrcc3	ENSMUST00000146491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021287	Xrcc3	ENSMUST00000145109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021287	Xrcc3	ENSMUST00000021715	ENSMUSP00000021715	TRANSLATION	protein_coding	-	CCDS26187.1	1	349	7	3.98	0.5	131.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000701	Tcl1b5	ENSMUST00000000717	ENSMUSP00000000717	TRANSLATION	protein_coding	-	CCDS36546.1	1	121	0	0.9	0.5	130.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061947	Serpina10	ENSMUST00000044231	ENSMUSP00000048357	TRANSLATION	protein_coding	-	CCDS26134.1	1	448	0	5	0.5	339	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000061947	Serpina10	ENSMUST00000121625	ENSMUSP00000113644	TRANSLATION	protein_coding	-	CCDS79150.1	1	394	0	4	0.5	140.6	0	3,-2	-	-	4.002	MINOR
ENSMUSG00000021255	Esrrb	ENSMUST00000021680	ENSMUSP00000021680	TRANSLATION	protein_coding	-	-	5	433	28	5.6	8.7	206.9	0	-4,-5	-	-	20.784	ALTERNATIVE:1
ENSMUSG00000021255	Esrrb	ENSMUST00000110203	ENSMUSP00000105832	TRANSLATION	protein_coding	-	-	1	378	25	4.6	0	174.3	0	-4,-5	-	-	12.048	MINOR
ENSMUSG00000021255	Esrrb	ENSMUST00000110204	ENSMUSP00000105833	TRANSLATION	protein_coding	-	CCDS26066.2	1	454	28	5.6	7.1	206.9	0	-4,-5	-	-	20.205	PRINCIPAL:3
ENSMUSG00000021255	Esrrb	ENSMUST00000167891	ENSMUSP00000131335	TRANSLATION	protein_coding	-	-	1	433	28	5.6	8.7	206.9	0	-4,-5	-	-	20.784	ALTERNATIVE:1
ENSMUSG00000021255	Esrrb	ENSMUST00000116402	ENSMUSP00000112103	TRANSLATION	protein_coding	-	CCDS49117.1	1	438	28	5.6	9.3	206.9	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000021255	Esrrb	ENSMUST00000136464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021186	Fbln5	ENSMUST00000221373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021186	Fbln5	ENSMUST00000021603	ENSMUSP00000021603	TRANSLATION	protein_coding	-	CCDS36525.1	1	448	39	4.88	8.8	183.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000021186	Fbln5	ENSMUST00000222587	ENSMUSP00000152680	TRANSLATION	protein_coding	-	-	5	461	39	4.88	5.2	183.1	0	0,-4	-	-	19.614	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000154509	ENSMUSP00000116718	TRANSLATION	protein_coding	stop	-	5	125	0	0	0	42	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000085280	ENSMUSP00000082383	TRANSLATION	protein_coding	start	-	1	2152	0	0	0	224.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000151286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063450	Syne2	ENSMUST00000139204	ENSMUSP00000118921	TRANSLATION	protein_coding	start	-	5	1644	0	0	0	224.2	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000044217	ENSMUSP00000047697	TRANSLATION	protein_coding	-	CCDS49091.1	5	6874	0	5.58	0.5	373.3	1	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000063450	Syne2	ENSMUST00000150317	ENSMUSP00000118142	TRANSLATION	protein_coding	stop	-	5	528	0	5.58	0	149.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000157033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063450	Syne2	ENSMUST00000154762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063450	Syne2	ENSMUST00000143031	ENSMUSP00000119120	TRANSLATION	protein_coding	-	-	5	6870	0	5.58	0	373.3	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000063450	Syne2	ENSMUST00000131480	ENSMUSP00000114364	TRANSLATION	protein_coding	stop	-	2	269	0	0	0	55.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000133623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063450	Syne2	ENSMUST00000148825	ENSMUSP00000120371	TRANSLATION	protein_coding	start/stop	-	3	195	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000148324	ENSMUSP00000121517	TRANSLATION	protein_coding	stop	-	3	82	0	1.55	0	32.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000126903	ENSMUSP00000115053	TRANSLATION	nonsense_mediated_decay	-	-	3	74	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000124685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063450	Syne2	ENSMUST00000142864	ENSMUSP00000119268	TRANSLATION	protein_coding	stop	-	3	112	0	2.63	0	44.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063450	Syne2	ENSMUST00000132161	ENSMUSP00000122781	TRANSLATION	nonsense_mediated_decay	start	-	1	733	0	0	0	97	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021103	Mnat1	ENSMUST00000021523	ENSMUSP00000021523	TRANSLATION	protein_coding	-	CCDS49087.1	1	309	9	2	17	240.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000021103	Mnat1	ENSMUST00000189644	ENSMUSP00000141146	TRANSLATION	nonsense_mediated_decay	-	-	1	93	9	2	0	74.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021103	Mnat1	ENSMUST00000187549	ENSMUSP00000141036	TRANSLATION	protein_coding	-	-	5	249	9	2	0	232.5	0	-4,-6	-	-	17.496	MINOR
ENSMUSG00000059970	Hspa2	ENSMUST00000080449	ENSMUSP00000079306	TRANSLATION	protein_coding	-	CCDS25993.1	1	633	19	1	9.7	867.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000059970	Hspa2	ENSMUST00000219555	ENSMUSP00000151408	TRANSLATION	protein_coding	-	CCDS25993.1	-	633	19	1	9.7	867.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021200	Asb2	ENSMUST00000021617	ENSMUSP00000021617	TRANSLATION	protein_coding	-	CCDS26128.1	1	634	0	3.82	3.9	193.9	0	-4,-6	-	-	13	PRINCIPAL:2
ENSMUSG00000021200	Asb2	ENSMUST00000149431	ENSMUSP00000117595	TRANSLATION	protein_coding	-	-	1	586	0	3.82	1.2	193.9	0	-4,-2	-	-	12.069	ALTERNATIVE:2
ENSMUSG00000021200	Asb2	ENSMUST00000135694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021200	Asb2	ENSMUST00000127447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076655	Ighv4-1	ENSMUST00000103464	ENSMUSP00000100245	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.35	0	41	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000037466	Tedc1	ENSMUST00000200522	ENSMUSP00000143367	TRANSLATION	nonsense_mediated_decay	start	-	3	80	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037466	Tedc1	ENSMUST00000196755	ENSMUSP00000143431	TRANSLATION	nonsense_mediated_decay	start	-	5	139	0	0	0	108.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037466	Tedc1	ENSMUST00000198072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037466	Tedc1	ENSMUST00000196505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037466	Tedc1	ENSMUST00000199382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037466	Tedc1	ENSMUST00000049271	ENSMUSP00000035351	TRANSLATION	protein_coding	-	CCDS49196.1	1	420	0	0	1.5	442.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000061533	Cep128	ENSMUST00000126048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000123400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000154836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000140674	ENSMUSP00000119394	TRANSLATION	protein_coding	start/stop	-	5	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061533	Cep128	ENSMUST00000143415	ENSMUSP00000122627	TRANSLATION	nonsense_mediated_decay	start	-	2	573	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061533	Cep128	ENSMUST00000141429	ENSMUSP00000115679	TRANSLATION	protein_coding	-	CCDS36515.2	1	1102	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000061533	Cep128	ENSMUST00000127802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061533	Cep128	ENSMUST00000123161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000145094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000138935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061533	Cep128	ENSMUST00000133329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000129111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061533	Cep128	ENSMUST00000127866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094652	Ighv1-42	ENSMUST00000103516	ENSMUSP00000100297	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	52.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094652	Ighv1-42	ENSMUST00000191868	ENSMUSP00000142261	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	52.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000036333	Kidins220	ENSMUST00000222013	ENSMUSP00000152399	TRANSLATION	protein_coding	start	-	1	1182	0	5.28	0	514.4	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000036333	Kidins220	ENSMUST00000220459	ENSMUSP00000152726	TRANSLATION	protein_coding	-	-	1	1672	0	9.03	1.2	566.8	6	-4,-5	-	-	9.754	MINOR
ENSMUSG00000036333	Kidins220	ENSMUST00000222481	ENSMUSP00000152752	TRANSLATION	protein_coding	start	-	3	61	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036333	Kidins220	ENSMUST00000221378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036333	Kidins220	ENSMUST00000221050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036333	Kidins220	ENSMUST00000066652	ENSMUSP00000063999	TRANSLATION	protein_coding	-	CCDS36424.1	5	1793	0	9.78	2.7	580.5	6	-4,-5	-	-	12.642	MINOR
ENSMUSG00000036333	Kidins220	ENSMUST00000220622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036333	Kidins220	ENSMUST00000221622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036333	Kidins220	ENSMUST00000222941	ENSMUSP00000152683	TRANSLATION	protein_coding	-	-	5	1763	0	9.78	6.3	580.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000036333	Kidins220	ENSMUST00000221423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094322	Ighv9-4	ENSMUST00000194159	ENSMUSP00000141555	TRANSLATION	IG_V_gene	stop	-	-	117	4	1.5	0	47.2	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000094322	Ighv9-4	ENSMUST00000103482	ENSMUSP00000100263	TRANSLATION	IG_V_gene	start/stop	-	-	98	4	1	0	47.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000061911	Myt1l	ENSMUST00000219231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061911	Myt1l	ENSMUST00000219463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061911	Myt1l	ENSMUST00000219899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061911	Myt1l	ENSMUST00000217961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061911	Myt1l	ENSMUST00000220072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061911	Myt1l	ENSMUST00000218198	ENSMUSP00000151919	TRANSLATION	protein_coding	-	-	1	328	0	1.05	0	402.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000061911	Myt1l	ENSMUST00000021009	ENSMUSP00000021009	TRANSLATION	protein_coding	-	CCDS49041.1	1	1185	4	5.98	0.5	717.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000061911	Myt1l	ENSMUST00000049784	ENSMUSP00000058264	TRANSLATION	protein_coding	-	CCDS49042.1	1	1187	4	5.98	0.5	717.6	0	-4,-5	-	-	16	PRINCIPAL:4
ENSMUSG00000061911	Myt1l	ENSMUST00000219744	ENSMUSP00000151977	TRANSLATION	protein_coding	start	-	3	189	4	1.6	0	89.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061911	Myt1l	ENSMUST00000219060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061911	Myt1l	ENSMUST00000218583	ENSMUSP00000151588	TRANSLATION	protein_coding	-	CCDS49041.1	1	1185	4	5.98	0.5	717.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000048387	Osr1	ENSMUST00000217975	ENSMUSP00000151780	TRANSLATION	protein_coding	stop	-	3	161	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048387	Osr1	ENSMUST00000057021	ENSMUSP00000055486	TRANSLATION	protein_coding	-	CCDS25809.1	1	266	12	2	7.6	62.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000020962	Gtf2a1	ENSMUST00000163693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020962	Gtf2a1	ENSMUST00000063314	ENSMUSP00000068562	TRANSLATION	protein_coding	-	CCDS49136.1	1	339	0	6.35	3.9	177.4	0	-4,-5	-	-	5.016	MINOR
ENSMUSG00000020962	Gtf2a1	ENSMUST00000021345	ENSMUSP00000021345	TRANSLATION	protein_coding	-	CCDS26089.1	1	378	0	7.43	8.4	307.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042724	Map3k9	ENSMUST00000035987	ENSMUSP00000041819	TRANSLATION	protein_coding	-	CCDS49104.1	1	1077	20	4.4	1.5	266.5	0	-2,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000042724	Map3k9	ENSMUST00000222322	ENSMUSP00000152201	TRANSLATION	protein_coding	-	-	5	1100	20	4.4	1.5	266.5	0	-2,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000042724	Map3k9	ENSMUST00000223292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000221074	ENSMUSP00000152282	TRANSLATION	protein_coding	-	-	5	496	0	10.75	1.7	662.7	0	-4,-5	-	-	12.176	MINOR
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000223168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000222276	ENSMUSP00000152369	TRANSLATION	protein_coding	-	-	2	49	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000221715	ENSMUSP00000152865	TRANSLATION	protein_coding	-	-	1	452	0	10.75	1.7	662.7	0	-4,-5	-	-	12.176	MINOR
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000084985	ENSMUSP00000082053	TRANSLATION	protein_coding	-	CCDS36557.1	2	524	0	10.75	17	662.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000109832	ENSMUSP00000105458	TRANSLATION	protein_coding	-	CCDS36558.1	2	485	0	10.75	10.8	662.7	0	-4,-5	-	-	14.452	MINOR
ENSMUSG00000017843	Ppp2r5c	ENSMUST00000220509	ENSMUSP00000152095	TRANSLATION	protein_coding	stop	-	5	283	0	4.5	0	308	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021266	Wars	ENSMUST00000161154	ENSMUSP00000124625	TRANSLATION	protein_coding	-	CCDS26166.1	1	481	22	9	1.5	148.5	0	-4,-5	-	-	18.172	PRINCIPAL:3
ENSMUSG00000021266	Wars	ENSMUST00000162952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021266	Wars	ENSMUST00000161410	ENSMUSP00000125320	TRANSLATION	protein_coding	-	CCDS49171.1	1	475	22	9	3.9	148.5	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000021266	Wars	ENSMUST00000162748	ENSMUSP00000125102	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021266	Wars	ENSMUST00000160974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021266	Wars	ENSMUST00000160477	ENSMUSP00000124649	TRANSLATION	nonsense_mediated_decay	-	-	1	39	0	1	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021266	Wars	ENSMUST00000109848	ENSMUSP00000105474	TRANSLATION	protein_coding	-	CCDS49171.1	1	475	22	9	3.9	148.5	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000076666	Ighv14-4	ENSMUST00000195706	ENSMUSP00000141226	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.33	0	51.4	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076666	Ighv14-4	ENSMUST00000103475	ENSMUSP00000100256	TRANSLATION	IG_V_gene	stop	-	-	111	6	1	0	50	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000012076	Brms1l	ENSMUST00000059250	ENSMUSP00000082500	TRANSLATION	protein_coding	-	CCDS36453.1	1	323	0	1.6	19.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000012076	Brms1l	ENSMUST00000220400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012076	Brms1l	ENSMUST00000219575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012076	Brms1l	ENSMUST00000217721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012076	Brms1l	ENSMUST00000219419	ENSMUSP00000151316	TRANSLATION	nonsense_mediated_decay	-	-	1	178	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012076	Brms1l	ENSMUST00000219337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012076	Brms1l	ENSMUST00000218779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041669	Prima1	ENSMUST00000127843	ENSMUSP00000114309	TRANSLATION	nonsense_mediated_decay	-	-	5	124	0	0	1.2	134.1	1	-1,-3	-	-	-1	MINOR
ENSMUSG00000041669	Prima1	ENSMUST00000155547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041669	Prima1	ENSMUST00000123655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041669	Prima1	ENSMUST00000074416	ENSMUSP00000074017	TRANSLATION	protein_coding	-	CCDS26127.1	1	153	0	0	6.3	202	1	-1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000041669	Prima1	ENSMUST00000156176	ENSMUSP00000123331	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000020634	Ubxn2a	ENSMUST00000141360	ENSMUSP00000116832	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020634	Ubxn2a	ENSMUST00000020962	ENSMUSP00000020962	TRANSLATION	protein_coding	-	CCDS25795.1	1	258	0	3.73	7.5	124.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020634	Ubxn2a	ENSMUST00000142867	ENSMUSP00000118834	TRANSLATION	protein_coding	-	CCDS25795.1	1	258	0	3.73	7.5	124.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021208	Ifi27l2b	ENSMUST00000044687	ENSMUSP00000041712	TRANSLATION	protein_coding	-	CCDS26133.1	1	283	0	1	0.5	186.1	0	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000020581	Agr2	ENSMUST00000147861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020581	Agr2	ENSMUST00000020898	ENSMUSP00000020898	TRANSLATION	protein_coding	-	CCDS25881.1	1	175	7	4.48	7.5	84.1	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000048118	Arid4a	ENSMUST00000125125	ENSMUSP00000121109	TRANSLATION	protein_coding	stop	-	1	295	0	7	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048118	Arid4a	ENSMUST00000135709	ENSMUSP00000121319	TRANSLATION	protein_coding	stop	-	1	531	0	3.15	0	100.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048118	Arid4a	ENSMUST00000046305	ENSMUSP00000035512	TRANSLATION	protein_coding	-	CCDS36471.1	5	1261	0	10.948	0.5	236.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048118	Arid4a	ENSMUST00000134718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021038	Vipas39	ENSMUST00000220858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021038	Vipas39	ENSMUST00000072744	ENSMUSP00000072527	TRANSLATION	protein_coding	-	CCDS49119.1	1	491	0	0	10.8	27.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021038	Vipas39	ENSMUST00000222350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021038	Vipas39	ENSMUST00000221707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021038	Vipas39	ENSMUST00000021426	ENSMUSP00000021426	TRANSLATION	protein_coding	-	CCDS26074.1	1	472	0	0	0.5	27.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000021038	Vipas39	ENSMUST00000179379	ENSMUSP00000137190	TRANSLATION	protein_coding	-	CCDS26074.1	1	472	0	0	0.5	27.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000011179	Odc1	ENSMUST00000221613	ENSMUSP00000152363	TRANSLATION	nonsense_mediated_decay	start	-	5	197	10	4.77	0	227	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000011179	Odc1	ENSMUST00000220947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011179	Odc1	ENSMUST00000221354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011179	Odc1	ENSMUST00000171737	ENSMUSP00000128661	TRANSLATION	protein_coding	-	CCDS25829.1	1	461	15	10.33	10.8	404.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000011179	Odc1	ENSMUST00000220849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011179	Odc1	ENSMUST00000222250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011179	Odc1	ENSMUST00000221701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011179	Odc1	ENSMUST00000222617	ENSMUSP00000152699	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095859	Ighv1-43	ENSMUST00000103517	ENSMUSP00000100298	TRANSLATION	IG_V_gene	start/stop	-	-	98	5	1	0	53.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095859	Ighv1-43	ENSMUST00000195417	ENSMUSP00000142065	TRANSLATION	IG_V_gene	stop	-	-	117	5	1.5	0	53.3	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000114046	Snapc1l	ENSMUST00000221833	ENSMUSP00000152852	TRANSLATION	protein_coding,RT	start/stop	-	5	148	0	1	0	156.5	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000076618	Ighj4	ENSMUST00000103427	ENSMUSP00000141935	TRANSLATION	IG_J_gene	start/stop	-	-	18	0	0.5	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000043487	Acot6	ENSMUST00000056822	ENSMUSP00000056131	TRANSLATION	protein_coding	-	CCDS26038.1	1	419	4	3	1.7	407.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043487	Acot6	ENSMUST00000222921	ENSMUSP00000152129	TRANSLATION	protein_coding	-	-	-	176	0	1	0	147.9	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000049036	Tmem121	ENSMUST00000058491	ENSMUSP00000055994	TRANSLATION	protein_coding	-	CCDS26206.1	1	318	0	0	7.5	194.8	0	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045064	Zc2hc1c	ENSMUST00000239335	ENSMUSP00000159225	TRANSLATION	protein_coding	-	-	-	442	3	0	0	30.9	0	-4,-5	-	-	5.91	MINOR
ENSMUSG00000045064	Zc2hc1c	ENSMUST00000059341	ENSMUSP00000051664	TRANSLATION	protein_coding	-	CCDS26056.1	1	527	3	0	1.5	63.7	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000045064	Zc2hc1c	ENSMUST00000239352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094134	Ighv5-15	ENSMUST00000192877	ENSMUSP00000141493	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	44.2	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094134	Ighv5-15	ENSMUST00000103457	ENSMUSP00000100238	TRANSLATION	IG_V_gene	stop	-	-	116	0	1.5	0	44.2	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021250	Fos	ENSMUST00000140525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021250	Fos	ENSMUST00000021674	ENSMUSP00000021674	TRANSLATION	protein_coding	-	CCDS26059.1	1	380	0	1.4	7.5	35	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021250	Fos	ENSMUST00000134311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021250	Fos	ENSMUST00000136122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096670	Ighv2-6	ENSMUST00000179657	ENSMUSP00000137454	TRANSLATION	IG_V_gene	stop	-	-	116	6	1	0	58.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000010608	Rbm25	ENSMUST00000182004	ENSMUSP00000138573	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000183181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000182036	ENSMUSP00000138565	TRANSLATION	protein_coding	stop	-	3	194	0	2.25	0	38.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000183039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010608	Rbm25	ENSMUST00000182618	ENSMUSP00000138665	TRANSLATION	protein_coding	stop	-	2	174	0	1.89	0	36.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000048155	ENSMUSP00000048470	TRANSLATION	protein_coding	-	CCDS49107.1	5	838	0	5.55	0.5	89.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000010608	Rbm25	ENSMUST00000182255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000182032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000182881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000182347	ENSMUSP00000138410	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000182633	ENSMUSP00000138625	TRANSLATION	nonsense_mediated_decay	-	-	5	194	0	0.81	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000182840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010608	Rbm25	ENSMUST00000183154	ENSMUSP00000138669	TRANSLATION	protein_coding	stop	-	2	102	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000181983	ENSMUSP00000138572	TRANSLATION	protein_coding	stop	-	1	585	0	2.25	0	38.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000183242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000182450	ENSMUSP00000138416	TRANSLATION	nonsense_mediated_decay	-	-	5	163	0	0.81	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010608	Rbm25	ENSMUST00000183128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010608	Rbm25	ENSMUST00000183282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021097	Clmn	ENSMUST00000223103	ENSMUSP00000152228	TRANSLATION	nonsense_mediated_decay	-	-	1	927	0	5.1	0	141.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021097	Clmn	ENSMUST00000223342	ENSMUSP00000152070	TRANSLATION	nonsense_mediated_decay	-	-	1	927	0	5.1	0	141.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021097	Clmn	ENSMUST00000223177	ENSMUSP00000152097	TRANSLATION	nonsense_mediated_decay	-	-	1	927	0	5.1	0	141.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021097	Clmn	ENSMUST00000109936	ENSMUSP00000105562	TRANSLATION	protein_coding	-	CCDS36540.1	1	1021	0	5.1	1.5	141.2	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021097	Clmn	ENSMUST00000222412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021097	Clmn	ENSMUST00000109937	ENSMUSP00000105563	TRANSLATION	protein_coding	-	CCDS36541.1	1	1052	0	5.1	1.5	141.2	1	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000021097	Clmn	ENSMUST00000222323	ENSMUSP00000152467	TRANSLATION	protein_coding	start	-	3	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021037	Ahsa1	ENSMUST00000222728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021037	Ahsa1	ENSMUST00000223002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021037	Ahsa1	ENSMUST00000223239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021037	Ahsa1	ENSMUST00000021425	ENSMUSP00000021425	TRANSLATION	protein_coding	-	CCDS26075.1	1	338	0	4.81	7.5	218.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021037	Ahsa1	ENSMUST00000223352	ENSMUSP00000152471	TRANSLATION	protein_coding	stop	-	3	78	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079013	Serpina3j	ENSMUST00000109957	ENSMUSP00000105583	TRANSLATION	protein_coding	-	CCDS49158.1	5	420	0	4	0.5	360.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000090121	Abhd12b	ENSMUST00000182927	ENSMUSP00000138681	TRANSLATION	protein_coding	-	-	5	282	8	0	1.2	54.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000090121	Abhd12b	ENSMUST00000162570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090121	Abhd12b	ENSMUST00000182512	ENSMUSP00000138185	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090121	Abhd12b	ENSMUST00000182782	ENSMUSP00000138423	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090121	Abhd12b	ENSMUST00000161541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090121	Abhd12b	ENSMUST00000169156	ENSMUSP00000134568	TRANSLATION	protein_coding	-	CCDS56843.1	5	359	8	0	2.9	52.8	0	-4,-5	-	-	11.832	PRINCIPAL:2
ENSMUSG00000034801	Sos2	ENSMUST00000035773	ENSMUSP00000044866	TRANSLATION	protein_coding	-	CCDS59573.1	5	1332	0	18.7	6.3	400.2	0	-4,-5	-	-	14.031	PRINCIPAL:2
ENSMUSG00000034801	Sos2	ENSMUST00000182838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034801	Sos2	ENSMUST00000182396	ENSMUSP00000138589	TRANSLATION	protein_coding	-	-	5	1300	0	17.7	1	382.4	0	-4,-5	-	-	8.556	MINOR
ENSMUSG00000034801	Sos2	ENSMUST00000182123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034801	Sos2	ENSMUST00000183306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034801	Sos2	ENSMUST00000182646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034801	Sos2	ENSMUST00000183277	ENSMUSP00000138793	TRANSLATION	protein_coding	-	-	5	1333	0	18.7	7.6	406.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000071178	Serpina1b	ENSMUST00000186166	ENSMUSP00000139941	TRANSLATION	protein_coding	-	CCDS26138.1	5	413	0	4.4	1.5	395.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071178	Serpina1b	ENSMUST00000187220	ENSMUSP00000141006	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000071178	Serpina1b	ENSMUST00000095450	ENSMUSP00000093101	TRANSLATION	protein_coding	-	CCDS26138.1	1	413	0	4.4	1.5	395.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071178	Serpina1b	ENSMUST00000164454	ENSMUSP00000127266	TRANSLATION	protein_coding	-	CCDS26138.1	1	413	0	4.4	1.5	395.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000036169	Sostdc1	ENSMUST00000041407	ENSMUSP00000040230	TRANSLATION	protein_coding	-	CCDS25887.1	1	206	0	1.4	6.3	363.1	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000079177	Fam228a	ENSMUST00000111154	ENSMUSP00000106784	TRANSLATION	protein_coding	-	CCDS49018.1	1	299	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000079177	Fam228a	ENSMUST00000220075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079177	Fam228a	ENSMUST00000220978	ENSMUSP00000152184	TRANSLATION	protein_coding	-	-	5	286	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000079177	Fam228a	ENSMUST00000222363	ENSMUSP00000152506	TRANSLATION	protein_coding	-	CCDS49018.1	1	299	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000073079	Srp54a	ENSMUST00000221479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073079	Srp54a	ENSMUST00000221655	ENSMUSP00000152448	TRANSLATION	protein_coding	stop	-	3	110	0	3.33	0	78.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073079	Srp54a	ENSMUST00000021407	ENSMUSP00000021407	TRANSLATION	protein_coding	-	CCDS36449.1	5	504	11	13.16	19.5	443.7	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000073079	Srp54a	ENSMUST00000223111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073079	Srp54a	ENSMUST00000220578	ENSMUSP00000152764	TRANSLATION	protein_coding	-	CCDS36449.1	1	504	11	13.16	19.5	443.7	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000073079	Srp54a	ENSMUST00000222027	ENSMUSP00000152541	TRANSLATION	protein_coding	start	-	3	89	0	2.349	0	74.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042734	Ttc9	ENSMUST00000036116	ENSMUSP00000048590	TRANSLATION	protein_coding	-	CCDS26024.1	1	219	0	1.195	0.5	27.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042734	Ttc9	ENSMUST00000218362	ENSMUSP00000152038	TRANSLATION	protein_coding	-	CCDS26024.1	1	219	0	1.195	0.5	27.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066438	Plekhd1	ENSMUST00000140770	ENSMUSP00000119711	TRANSLATION	protein_coding	-	CCDS49100.1	1	505	12	1.16	7.6	42.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000066438	Plekhd1	ENSMUST00000142760	ENSMUSP00000121812	TRANSLATION	nonsense_mediated_decay	start	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066438	Plekhd1	ENSMUST00000153762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066438	Plekhd1	ENSMUST00000152465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020656	Grhl1	ENSMUST00000223442	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020656	Grhl1	ENSMUST00000221426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020656	Grhl1	ENSMUST00000020985	ENSMUSP00000020985	TRANSLATION	protein_coding	-	CCDS36420.1	1	536	0	0	0.5	266.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000020656	Grhl1	ENSMUST00000085553	ENSMUSP00000082689	TRANSLATION	protein_coding	-	CCDS49038.1	1	618	0	0	11.6	266.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000076661	Ighv16-1	ENSMUST00000195641	ENSMUSP00000141383	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	45.9	0	1,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076661	Ighv16-1	ENSMUST00000103470	ENSMUSP00000100251	TRANSLATION	IG_V_gene	start/stop	-	-	99	3	1	0	45.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096568	Ighd2-3	ENSMUST00000177839	ENSMUSP00000142229	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034442	Trmt5	ENSMUST00000220701	ENSMUSP00000152289	TRANSLATION	protein_coding	start	-	3	66	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034442	Trmt5	ENSMUST00000221189	ENSMUSP00000152619	TRANSLATION	protein_coding	stop	-	5	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034442	Trmt5	ENSMUST00000116420	ENSMUSP00000112121	TRANSLATION	protein_coding	-	CCDS36474.1	1	501	17	1.61	1.5	0	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021180	Rps6ka5	ENSMUST00000222731	ENSMUSP00000152481	TRANSLATION	protein_coding	-	-	1	798	38	16.38	1.5	509.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021180	Rps6ka5	ENSMUST00000221307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021180	Rps6ka5	ENSMUST00000221246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021180	Rps6ka5	ENSMUST00000221379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021180	Rps6ka5	ENSMUST00000221356	ENSMUSP00000152293	TRANSLATION	protein_coding	start/stop	-	3	207	18	4.6	0	150.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021180	Rps6ka5	ENSMUST00000221323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021180	Rps6ka5	ENSMUST00000222403	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021180	Rps6ka5	ENSMUST00000043599	ENSMUSP00000042987	TRANSLATION	protein_coding	-	CCDS26107.1	1	863	38	16.38	0.5	490.7	0	-4,-5	-	-	16.89	MINOR
ENSMUSG00000021180	Rps6ka5	ENSMUST00000222347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057963	Itpk1	ENSMUST00000179210	ENSMUSP00000136931	TRANSLATION	protein_coding	stop	-	3	21	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057963	Itpk1	ENSMUST00000178697	ENSMUSP00000137275	TRANSLATION	protein_coding	stop	-	5	85	0	1.455	0	45.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057963	Itpk1	ENSMUST00000179417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057963	Itpk1	ENSMUST00000191320	ENSMUSP00000139394	TRANSLATION	protein_coding	stop	-	5	44	2	1.33	0	40.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057963	Itpk1	ENSMUST00000046518	ENSMUSP00000046027	TRANSLATION	protein_coding	-	CCDS26121.1	1	419	21	8.26	4.1	463.1	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000096803	Gm6803	ENSMUST00000178301	ENSMUSP00000137317	TRANSLATION	protein_coding	-	-	-	144	0	1	3	62.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021259	Cyp46a1	ENSMUST00000221708	ENSMUSP00000152489	TRANSLATION	nonsense_mediated_decay	start	-	5	112	1	2.45	0	26.7	0	1,2	-	-	-1	MINOR
ENSMUSG00000021259	Cyp46a1	ENSMUST00000021684	ENSMUSP00000021684	TRANSLATION	protein_coding	-	CCDS26160.1	1	500	31	12.2	6.3	286.6	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000021259	Cyp46a1	ENSMUST00000222240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021259	Cyp46a1	ENSMUST00000222902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019235	Rps6kl1	ENSMUST00000019379	ENSMUSP00000019379	TRANSLATION	protein_coding	-	-	1	442	0	1.1	0	40.8	0	-4,-5	-	-	0.9	MINOR
ENSMUSG00000019235	Rps6kl1	ENSMUST00000222232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019235	Rps6kl1	ENSMUST00000221972	ENSMUSP00000152336	TRANSLATION	protein_coding	-	CCDS36496.1	1	544	0	3.65	1.5	144	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000019235	Rps6kl1	ENSMUST00000223399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054459	Vsnl1	ENSMUST00000220506	ENSMUSP00000152711	TRANSLATION	protein_coding	-	CCDS25816.1	5	191	21	2.8	19.5	90	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000054459	Vsnl1	ENSMUST00000072299	ENSMUSP00000072145	TRANSLATION	protein_coding	-	CCDS25816.1	1	191	21	2.8	19.5	90	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025323	Sp4	ENSMUST00000222314	ENSMUSP00000152603	TRANSLATION	protein_coding	-	CCDS36579.1	1	782	12	1.9	5.1	61.9	0	-4,-5	-	-	19.952	PRINCIPAL:2
ENSMUSG00000025323	Sp4	ENSMUST00000026367	ENSMUSP00000026367	TRANSLATION	protein_coding	-	-	1	780	12	1.9	3.9	62.4	0	-4,-5	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000025323	Sp4	ENSMUST00000221844	ENSMUSP00000152330	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021091	Serpina3n	ENSMUST00000021506	ENSMUSP00000021506	TRANSLATION	protein_coding	-	CCDS26152.1	1	418	0	4	0.5	395.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000020669	Sh3yl1	ENSMUST00000110880	ENSMUSP00000106504	TRANSLATION	protein_coding	-	CCDS79110.1	1	302	0	1.2	0.5	193.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000020669	Sh3yl1	ENSMUST00000128814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020669	Sh3yl1	ENSMUST00000020997	ENSMUSP00000020997	TRANSLATION	protein_coding	-	CCDS25859.1	1	340	0	1.2	3.9	193.6	0	-4,-7	-	-	13	PRINCIPAL:3
ENSMUSG00000020669	Sh3yl1	ENSMUST00000142693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021013	Ttc8	ENSMUST00000223277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021013	Ttc8	ENSMUST00000132878	ENSMUSP00000115828	TRANSLATION	protein_coding	stop	-	5	207	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021013	Ttc8	ENSMUST00000079146	ENSMUSP00000078148	TRANSLATION	protein_coding	-	CCDS26102.1	1	515	0	3.05	6.4	37.8	0	-4,-7	-	-	13.884	MINOR
ENSMUSG00000021013	Ttc8	ENSMUST00000168255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021013	Ttc8	ENSMUST00000223356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021013	Ttc8	ENSMUST00000223023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021013	Ttc8	ENSMUST00000139298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021013	Ttc8	ENSMUST00000085109	ENSMUSP00000082190	TRANSLATION	protein_coding	-	CCDS26101.1	1	505	0	3.05	9.6	37.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021013	Ttc8	ENSMUST00000124514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020671	Rab10	ENSMUST00000021001	ENSMUSP00000021001	TRANSLATION	protein_coding	-	CCDS25782.1	1	200	19	5.5	17.3	219.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000076619	Ighj3	ENSMUST00000103428	ENSMUSP00000141736	TRANSLATION	IG_J_gene	start/stop	-	-	16	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000020651	Slc26a4	ENSMUST00000218992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020651	Slc26a4	ENSMUST00000001253	ENSMUSP00000001253	TRANSLATION	protein_coding	-	CCDS36429.1	1	780	0	3.855	6.3	482.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047002	Msgn1	ENSMUST00000049877	ENSMUSP00000055001	TRANSLATION	protein_coding	-	CCDS25814.1	-	188	0	0.2	1.5	45.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021130	Galnt16	ENSMUST00000217926	ENSMUSP00000151370	TRANSLATION	protein_coding	start	-	2	125	0	1.84	0	36.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021130	Galnt16	ENSMUST00000021558	ENSMUSP00000021558	TRANSLATION	protein_coding	-	CCDS36482.1	1	558	23	12.07	7.5	148.6	1	-2,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021130	Galnt16	ENSMUST00000219993	ENSMUSP00000151829	TRANSLATION	protein_coding	-	CCDS36482.1	1	558	23	12.07	7.5	148.6	1	-2,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021130	Galnt16	ENSMUST00000219267	ENSMUSP00000151800	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	0.96	0	39.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021130	Galnt16	ENSMUST00000218943	ENSMUSP00000151619	TRANSLATION	protein_coding	-	CCDS36482.1	1	558	23	12.07	7.5	148.6	1	-2,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021130	Galnt16	ENSMUST00000218648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037679	Inf2	ENSMUST00000222275	ENSMUSP00000152851	TRANSLATION	protein_coding	start	-	1	720	0	7.26	0	273	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037679	Inf2	ENSMUST00000220786	ENSMUSP00000152590	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037679	Inf2	ENSMUST00000101029	ENSMUSP00000098591	TRANSLATION	protein_coding	-	CCDS36571.1	1	1271	0	11.03	0.5	478.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021135	Slc10a1	ENSMUST00000218162	ENSMUSP00000151555	TRANSLATION	protein_coding	-	CCDS49101.1	1	362	0	2.9	1.5	151.6	8	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021135	Slc10a1	ENSMUST00000095572	ENSMUSP00000093229	TRANSLATION	protein_coding	-	CCDS49101.1	1	362	0	2.9	1.5	151.6	8	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021135	Slc10a1	ENSMUST00000220266	ENSMUSP00000151510	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	0.2	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000021135	Slc10a1	ENSMUST00000218342	ENSMUSP00000151215	TRANSLATION	protein_coding	-	-	1	317	0	2.9	0.5	151.6	8	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021240	Abcd4	ENSMUST00000221948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021240	Abcd4	ENSMUST00000222581	ENSMUSP00000152556	TRANSLATION	nonsense_mediated_decay	-	-	1	194	0	0.505	0	152.9	4	-4,0	-	-	-1	MINOR
ENSMUSG00000021240	Abcd4	ENSMUST00000222889	ENSMUSP00000152519	TRANSLATION	nonsense_mediated_decay	start	-	5	150	0	0	0	89.5	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000021240	Abcd4	ENSMUST00000223107	ENSMUSP00000152694	TRANSLATION	protein_coding	-	-	1	558	9	5.785	0	324	5	-4,-1	-	-	13.65	MINOR
ENSMUSG00000021240	Abcd4	ENSMUST00000220678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021240	Abcd4	ENSMUST00000220952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021240	Abcd4	ENSMUST00000220553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021240	Abcd4	ENSMUST00000222942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021240	Abcd4	ENSMUST00000021666	ENSMUSP00000021666	TRANSLATION	protein_coding	-	CCDS26047.1	1	606	12	6.585	3.9	336.5	5	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000021240	Abcd4	ENSMUST00000221070	ENSMUSP00000152881	TRANSLATION	protein_coding	stop	-	5	130	0	0.575	0	44.5	4	-4,-1	-	-	-1	MINOR
ENSMUSG00000021257	Angel1	ENSMUST00000167813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021257	Angel1	ENSMUST00000171293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021257	Angel1	ENSMUST00000165332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021257	Angel1	ENSMUST00000021682	ENSMUSP00000021682	TRANSLATION	protein_coding	-	CCDS26067.1	1	667	7	2.23	3.9	124.9	0	-2,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000021257	Angel1	ENSMUST00000163388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021257	Angel1	ENSMUST00000167272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021236	Entpd5	ENSMUST00000135061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021236	Entpd5	ENSMUST00000120942	ENSMUSP00000112516	TRANSLATION	protein_coding	-	CCDS26045.1	1	427	8	4.665	6.3	252.1	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000021236	Entpd5	ENSMUST00000117286	ENSMUSP00000114011	TRANSLATION	protein_coding	-	CCDS26045.1	1	427	8	4.665	6.3	252.1	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000021236	Entpd5	ENSMUST00000072061	ENSMUSP00000071939	TRANSLATION	protein_coding	-	CCDS36491.1	5	452	8	4.665	1.5	252.1	0	-4,-6	-	-	18.188	MINOR
ENSMUSG00000021236	Entpd5	ENSMUST00000136511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021236	Entpd5	ENSMUST00000122194	ENSMUSP00000113106	TRANSLATION	protein_coding	-	CCDS26045.1	1	427	8	4.665	6.3	252.1	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000021236	Entpd5	ENSMUST00000021662	ENSMUSP00000021662	TRANSLATION	protein_coding	-	CCDS26045.1	1	427	8	4.665	6.3	252.1	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000021236	Entpd5	ENSMUST00000110272	ENSMUSP00000105901	TRANSLATION	protein_coding	-	CCDS26045.1	1	427	8	4.665	6.3	252.1	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000021056	Tex21	ENSMUST00000021453	ENSMUSP00000021453	TRANSLATION	protein_coding	-	CCDS25989.1	1	575	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000021056	Tex21	ENSMUST00000220068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021056	Tex21	ENSMUST00000219327	ENSMUSP00000151892	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021056	Tex21	ENSMUST00000218426	ENSMUSP00000151515	TRANSLATION	protein_coding	-	-	1	527	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000004789	Dlst	ENSMUST00000223409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000223438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000220559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000221288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004789	Dlst	ENSMUST00000223413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004789	Dlst	ENSMUST00000221357	ENSMUSP00000152664	TRANSLATION	nonsense_mediated_decay	-	-	1	454	4	7.7	2.7	344.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000004789	Dlst	ENSMUST00000223415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000222998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000221842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004789	Dlst	ENSMUST00000222472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000220633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004789	Dlst	ENSMUST00000053811	ENSMUSP00000060346	TRANSLATION	protein_coding	-	CCDS26052.1	1	454	4	7.7	2.7	344.6	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000004789	Dlst	ENSMUST00000223332	ENSMUSP00000152235	TRANSLATION	nonsense_mediated_decay	-	-	5	59	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021256	Vash1	ENSMUST00000021681	ENSMUSP00000021681	TRANSLATION	protein_coding	-	CCDS49118.1	1	375	0	0	0.5	395.1	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000096459	Ighv9-3	ENSMUST00000103473	ENSMUSP00000100254	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	49.9	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021081	Serpina1f	ENSMUST00000117053	ENSMUSP00000112533	TRANSLATION	protein_coding	-	CCDS49155.1	1	356	0	3.6	0.5	130.8	0	1,-4	-	-	4.398	MINOR
ENSMUSG00000021081	Serpina1f	ENSMUST00000118101	ENSMUSP00000113736	TRANSLATION	protein_coding	-	CCDS26137.1	1	411	0	4.4	0.5	261.7	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000021081	Serpina1f	ENSMUST00000021490	ENSMUSP00000021490	TRANSLATION	protein_coding	-	CCDS26137.1	1	411	0	4.4	0.5	261.7	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000096824	Ighv2-7	ENSMUST00000103456	ENSMUSP00000100237	TRANSLATION	IG_V_gene	stop	-	-	116	6	1.3	0	46.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000113201	Gm21936	ENSMUST00000221442	ENSMUSP00000152437	TRANSLATION	protein_coding	-	-	-	144	0	1	3	68.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066440	Zfyve26	ENSMUST00000219105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000219571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000218377	ENSMUSP00000151280	TRANSLATION	protein_coding	-	-	5	567	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000066440	Zfyve26	ENSMUST00000218447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000218510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000220262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000217723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000021547	ENSMUSP00000021547	TRANSLATION	protein_coding	-	CCDS36481.1	1	2529	8	1.76	0.5	61	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000066440	Zfyve26	ENSMUST00000220092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000219912	ENSMUSP00000151290	TRANSLATION	protein_coding	start	-	1	487	8	1.76	0	61	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066440	Zfyve26	ENSMUST00000220390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066440	Zfyve26	ENSMUST00000218433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000219842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066440	Zfyve26	ENSMUST00000220003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042700	Sipa1l1	ENSMUST00000222312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042700	Sipa1l1	ENSMUST00000220963	ENSMUSP00000152681	TRANSLATION	protein_coding	-	-	1	1713	0	4.22	0	484.8	0	-4,-2	-	-	10.692	MINOR
ENSMUSG00000042700	Sipa1l1	ENSMUST00000221169	ENSMUSP00000152485	TRANSLATION	nonsense_mediated_decay	start	-	3	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042700	Sipa1l1	ENSMUST00000222714	ENSMUSP00000152212	TRANSLATION	protein_coding	-	CCDS26026.1	1	1782	0	4.22	6.5	506.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042700	Sipa1l1	ENSMUST00000166429	ENSMUSP00000131030	TRANSLATION	protein_coding	-	CCDS26026.1	1	1782	0	4.22	6.5	506.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000042700	Sipa1l1	ENSMUST00000220766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042700	Sipa1l1	ENSMUST00000221327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042700	Sipa1l1	ENSMUST00000220550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042700	Sipa1l1	ENSMUST00000222849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042700	Sipa1l1	ENSMUST00000222298	ENSMUSP00000152356	TRANSLATION	protein_coding	-	CCDS49105.1	1	1751	0	4.22	0.5	506.6	0	-4,-2	-	-	12	MINOR
ENSMUSG00000042700	Sipa1l1	ENSMUST00000053969	ENSMUSP00000061014	TRANSLATION	protein_coding	-	CCDS26026.1	5	1782	0	4.22	6.5	506.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000076633	Ighv5-2	ENSMUST00000103442	ENSMUSP00000100223	TRANSLATION	IG_V_gene	stop	-	-	116	0	1.5	0	46	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076633	Ighv5-2	ENSMUST00000195468	ENSMUSP00000141310	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	46	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000004698	Hdac9	ENSMUST00000209990	ENSMUSP00000147395	TRANSLATION	protein_coding	-	-	5	1023	12	12.62	5.3	392.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004698	Hdac9	ENSMUST00000210724	ENSMUSP00000147903	TRANSLATION	protein_coding	-	-	5	936	12	12.14	0	381.7	0	-4,-5	-	-	16.41	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000239340	ENSMUSP00000159264	TRANSLATION	protein_coding	-	-	-	575	0	2	0.5	120.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000239321	ENSMUSP00000159253	TRANSLATION	protein_coding	-	-	-	565	0	2	3.6	110.2	0	-4,-6	-	-	1.21	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000211632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004698	Hdac9	ENSMUST00000209463	ENSMUSP00000148007	TRANSLATION	protein_coding	stop	-	3	114	0	1.55	0	101.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000209667	ENSMUSP00000147755	TRANSLATION	protein_coding	-	-	1	544	0	2	4.1	110.2	0	-4,-5	-	-	1.442	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000209902	ENSMUSP00000147519	TRANSLATION	protein_coding	-	-	5	1064	12	12.62	4.1	381.7	0	-4,-5	-	-	18.812	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000211107	ENSMUSP00000147869	TRANSLATION	protein_coding	-	-	5	560	0	2	2.4	120.7	0	-4,-5	-	-	0.652	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000110819	ENSMUSP00000106443	TRANSLATION	protein_coding	-	CCDS36432.1	1	588	0	2	4.1	110.2	0	-4,-5	-	-	1.442	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000209750	ENSMUSP00000148029	TRANSLATION	protein_coding	-	-	5	1067	12	12.62	2.9	392.2	0	-4,-5	-	-	18.884	MINOR
ENSMUSG00000004698	Hdac9	ENSMUST00000211752	ENSMUSP00000148224	TRANSLATION	nonsense_mediated_decay	-	-	1	975	10	10.54	0	365	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094051	Ighv1-36	ENSMUST00000191862	ENSMUSP00000142128	TRANSLATION	IG_V_gene	stop	-	-	117	5	1.5	0	56.7	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000094051	Ighv1-36	ENSMUST00000103513	ENSMUSP00000100294	TRANSLATION	IG_V_gene	stop	-	-	116	5	1.5	0	56.7	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095583	Ighv14-2	ENSMUST00000103467	ENSMUSP00000100248	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	53.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000095700	Ighv10-3	ENSMUST00000103495	ENSMUSP00000100276	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.5	0	50.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000020545	Lrrc72	ENSMUST00000221155	ENSMUSP00000152732	TRANSLATION	protein_coding	-	-	5	288	0	4.214	1.5	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020545	Lrrc72	ENSMUST00000221665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020545	Lrrc72	ENSMUST00000020853	ENSMUSP00000020853	TRANSLATION	protein_coding	-	CCDS25886.1	1	106	0	0.36	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020545	Lrrc72	ENSMUST00000222145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066027	Gm10436	ENSMUST00000221884	ENSMUSP00000152775	TRANSLATION	nonsense_mediated_decay	start	-	5	16	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066027	Gm10436	ENSMUST00000222081	ENSMUSP00000152194	TRANSLATION	protein_coding	start	-	1	323	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066027	Gm10436	ENSMUST00000071580	ENSMUSP00000071508	TRANSLATION	protein_coding	-	CCDS49132.1	1	520	2	0	0.5	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000066027	Gm10436	ENSMUST00000222391	ENSMUSP00000152474	TRANSLATION	nonsense_mediated_decay	start	-	3	25	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066027	Gm10436	ENSMUST00000222556	ENSMUSP00000152744	TRANSLATION	protein_coding	start	-	1	192	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000066027	Gm10436	ENSMUST00000223172	ENSMUSP00000152572	TRANSLATION	nonsense_mediated_decay	start	-	5	22	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000066027	Gm10436	ENSMUST00000220521	ENSMUSP00000152292	TRANSLATION	protein_coding	-	-	1	325	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037660	Gdf7	ENSMUST00000037313	ENSMUSP00000038301	TRANSLATION	protein_coding	-	CCDS83954.1	5	461	0	0.6	0.5	159.6	0	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000037660	Gdf7	ENSMUST00000220073	ENSMUSP00000151234	TRANSLATION	protein_coding	-	-	1	453	0	0.6	0.5	151.4	0	1,-2	-	-	11.508	ALTERNATIVE:2
ENSMUSG00000021062	Rab15	ENSMUST00000118604	ENSMUSP00000112789	TRANSLATION	protein_coding	-	CCDS83970.1	3	166	11	4.62	5.3	148	0	-4,-5	-	-	7.946	MINOR
ENSMUSG00000021062	Rab15	ENSMUST00000143863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021062	Rab15	ENSMUST00000122419	ENSMUSP00000112457	TRANSLATION	protein_coding	-	-	5	183	11	4.82	0	153	0	-4,-6	-	-	7.05	MINOR
ENSMUSG00000021062	Rab15	ENSMUST00000021459	ENSMUSP00000021459	TRANSLATION	protein_coding	-	CCDS25997.1	1	212	20	5.62	6.4	208.8	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021062	Rab15	ENSMUST00000134124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021062	Rab15	ENSMUST00000141622	ENSMUSP00000115720	TRANSLATION	protein_coding	stop	-	3	114	11	3.75	0	140.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021062	Rab15	ENSMUST00000121716	ENSMUSP00000113299	TRANSLATION	protein_coding	-	CCDS83970.1	3	166	11	4.62	5.3	148	0	-4,-5	-	-	7.946	MINOR
ENSMUSG00000021062	Rab15	ENSMUST00000154765	ENSMUSP00000122067	TRANSLATION	protein_coding	stop	-	3	138	11	4.35	0	148	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093894	Ighv1-53	ENSMUST00000103523	ENSMUSP00000100304	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	60	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021028	Mbip	ENSMUST00000021416	ENSMUSP00000021416	TRANSLATION	protein_coding	-	CCDS25920.1	1	341	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021028	Mbip	ENSMUST00000218118	ENSMUSP00000151594	TRANSLATION	nonsense_mediated_decay	-	-	2	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021028	Mbip	ENSMUST00000218321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057469	E2f6	ENSMUST00000222582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057469	E2f6	ENSMUST00000220794	ENSMUSP00000152576	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057469	E2f6	ENSMUST00000220707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057469	E2f6	ENSMUST00000221541	ENSMUSP00000152314	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057469	E2f6	ENSMUST00000221600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057469	E2f6	ENSMUST00000221934	ENSMUSP00000152882	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057469	E2f6	ENSMUST00000020908	ENSMUSP00000020908	TRANSLATION	protein_coding	-	CCDS36409.1	1	272	0	3	1.5	190.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000044573	Acp1	ENSMUST00000074038	ENSMUSP00000073686	TRANSLATION	protein_coding	-	CCDS49045.1	1	158	10	5	16.3	168.3	0	-4,-6	-	-	21.844	ALTERNATIVE:1
ENSMUSG00000044573	Acp1	ENSMUST00000219697	ENSMUSP00000151833	TRANSLATION	nonsense_mediated_decay	-	-	5	114	8	2.45	1.2	86.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044573	Acp1	ENSMUST00000062740	ENSMUSP00000106509	TRANSLATION	protein_coding	-	CCDS36427.1	1	158	10	4.75	16.3	170.9	0	-4,-6	-	-	21.502	PRINCIPAL:3
ENSMUSG00000044573	Acp1	ENSMUST00000218615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044573	Acp1	ENSMUST00000222791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044573	Acp1	ENSMUST00000218696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057265	Bbof1	ENSMUST00000151789	ENSMUSP00000115708	TRANSLATION	protein_coding	start/stop	-	3	147	0	0	0	93.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057265	Bbof1	ENSMUST00000081828	ENSMUSP00000080512	TRANSLATION	protein_coding	-	CCDS36492.1	1	533	0	0	0.5	141.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057265	Bbof1	ENSMUST00000153540	ENSMUSP00000114625	TRANSLATION	nonsense_mediated_decay	start	-	3	108	0	0	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057265	Bbof1	ENSMUST00000221969	ENSMUSP00000152383	TRANSLATION	protein_coding	start	-	1	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072791	Abcb5	ENSMUST00000035515	ENSMUSP00000046177	TRANSLATION	protein_coding	-	CCDS49198.1	1	1255	11	21.54	1.5	685.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000072791	Abcb5	ENSMUST00000100982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072791	Abcb5	ENSMUST00000177311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041341	Atg2b	ENSMUST00000222395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041341	Atg2b	ENSMUST00000221015	ENSMUSP00000152527	TRANSLATION	protein_coding	start	-	1	916	0	0	0	107.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041341	Atg2b	ENSMUST00000220960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041341	Atg2b	ENSMUST00000041055	ENSMUSP00000037441	TRANSLATION	protein_coding	-	CCDS36550.1	1	2075	0	0	4.1	166.8	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000041341	Atg2b	ENSMUST00000221568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021294	Kif26a	ENSMUST00000183816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021294	Kif26a	ENSMUST00000128402	ENSMUSP00000119482	TRANSLATION	protein_coding	-	CCDS49186.1	1	1881	10	4	1.5	179.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000095204	Ighv1-52	ENSMUST00000192554	ENSMUSP00000141930	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	54.4	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000095204	Ighv1-52	ENSMUST00000103522	ENSMUSP00000100303	TRANSLATION	IG_V_gene	stop	-	-	116	9	1.5	0	54.4	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000051166	Eml5	ENSMUST00000065716	ENSMUSP00000065643	TRANSLATION	protein_coding	-	-	5	1930	0	22.414	0	402.9	0	-4,-1	-	-	10.734	MINOR
ENSMUSG00000051166	Eml5	ENSMUST00000223282	ENSMUSP00000152709	TRANSLATION	protein_coding	-	CCDS36519.1	5	1977	0	23.048	15	401.8	0	-4,-1	-	-	15.934	PRINCIPAL:1
ENSMUSG00000051166	Eml5	ENSMUST00000221107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051166	Eml5	ENSMUST00000222128	ENSMUSP00000152401	TRANSLATION	protein_coding	start/stop	-	2	184	0	1.442	0	39.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000051166	Eml5	ENSMUST00000222593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051166	Eml5	ENSMUST00000220848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051166	Eml5	ENSMUST00000220676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051166	Eml5	ENSMUST00000221511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051166	Eml5	ENSMUST00000222097	ENSMUSP00000152624	TRANSLATION	nonsense_mediated_decay	start	-	5	125	0	1.1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051166	Eml5	ENSMUST00000222717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021298	Gpr132	ENSMUST00000222776	ENSMUSP00000152509	TRANSLATION	protein_coding	stop	-	5	19	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021298	Gpr132	ENSMUST00000021729	ENSMUSP00000021729	TRANSLATION	protein_coding	-	CCDS26199.1	1	382	0	0.882	0.5	109.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043060	Fscb	ENSMUST00000059833	ENSMUSP00000051554	TRANSLATION	protein_coding	-	CCDS49073.1	-	1062	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021039	Snw1	ENSMUST00000021428	ENSMUSP00000021428	TRANSLATION	protein_coding	-	CCDS49121.1	1	536	1	12.5	17	251.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021039	Snw1	ENSMUST00000223119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021039	Snw1	ENSMUST00000222579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035133	Arhgap5	ENSMUST00000219443	ENSMUSP00000151809	TRANSLATION	protein_coding	-	CCDS36443.1	5	1503	17	5.45	8.8	331	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035133	Arhgap5	ENSMUST00000218755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035133	Arhgap5	ENSMUST00000110725	ENSMUSP00000106353	TRANSLATION	protein_coding	-	CCDS36443.1	1	1503	17	5.45	8.8	331	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035133	Arhgap5	ENSMUST00000217820	ENSMUSP00000151267	TRANSLATION	protein_coding	-	-	5	241	0	4.5	0	172.6	0	-4,-5	-	-	4.098	MINOR
ENSMUSG00000021116	Eif2s1	ENSMUST00000071230	ENSMUSP00000071214	TRANSLATION	protein_coding	-	CCDS26003.1	1	315	0	6.75	21.5	182.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021116	Eif2s1	ENSMUST00000219754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021116	Eif2s1	ENSMUST00000220382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020639	Pfn4	ENSMUST00000219503	ENSMUSP00000151411	TRANSLATION	protein_coding	-	-	1	126	0	2.73	0	99.4	0	-4,-6	-	-	10.776	MINOR
ENSMUSG00000020639	Pfn4	ENSMUST00000219438	ENSMUSP00000151865	TRANSLATION	protein_coding	stop	-	3	76	0	1.4	0	47	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020639	Pfn4	ENSMUST00000020967	ENSMUSP00000020967	TRANSLATION	protein_coding	-	CCDS25790.1	1	129	0	2.994	8.8	111	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020639	Pfn4	ENSMUST00000178879	ENSMUSP00000136765	TRANSLATION	protein_coding	-	CCDS25790.1	1	129	0	2.994	8.8	111	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000020664	Dld	ENSMUST00000110857	ENSMUSP00000106481	TRANSLATION	protein_coding	-	CCDS36428.1	1	509	60	11.3	13.6	224.1	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000020664	Dld	ENSMUST00000220415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020664	Dld	ENSMUST00000218624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020664	Dld	ENSMUST00000219213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021065	Fut8	ENSMUST00000177595	ENSMUSP00000136327	TRANSLATION	protein_coding	-	CCDS25999.1	1	575	7	8	15	39.1	0	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021065	Fut8	ENSMUST00000218851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021065	Fut8	ENSMUST00000171770	ENSMUSP00000130845	TRANSLATION	protein_coding	-	CCDS25999.1	1	575	7	8	15	39.1	0	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021065	Fut8	ENSMUST00000219289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021065	Fut8	ENSMUST00000062804	ENSMUSP00000054530	TRANSLATION	protein_coding	-	CCDS25999.1	1	575	7	8	15	39.1	0	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021065	Fut8	ENSMUST00000219299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021065	Fut8	ENSMUST00000217879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034601	2700049A03Rik	ENSMUST00000045907	ENSMUSP00000044701	TRANSLATION	protein_coding	-	CCDS49082.1	1	1432	0	0	0.5	1910.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000034601	2700049A03Rik	ENSMUST00000149564	ENSMUSP00000118956	TRANSLATION	protein_coding	-	CCDS49081.1	1	1520	0	0	0.5	1910.8	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000034601	2700049A03Rik	ENSMUST00000134748	ENSMUSP00000114210	TRANSLATION	nonsense_mediated_decay	start	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035181	Heatr5a	ENSMUST00000218847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000220369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000217966	ENSMUSP00000151713	TRANSLATION	protein_coding	start/stop	-	3	260	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035181	Heatr5a	ENSMUST00000218254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000219277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000218186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000219641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035181	Heatr5a	ENSMUST00000040583	ENSMUSP00000043115	TRANSLATION	protein_coding	-	CCDS25902.1	5	2038	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000066392	Nrxn3	ENSMUST00000057634	ENSMUSP00000050075	TRANSLATION	protein_coding	-	CCDS49134.1	1	1100	16	13.165	0.5	395.3	3	-4,-5	-	-	7.71	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000163944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066392	Nrxn3	ENSMUST00000190030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066392	Nrxn3	ENSMUST00000167734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066392	Nrxn3	ENSMUST00000170533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066392	Nrxn3	ENSMUST00000167887	ENSMUSP00000127926	TRANSLATION	protein_coding	-	CCDS49134.1	5	1100	16	13.165	0.5	395.3	3	-4,-5	-	-	7.71	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000190626	ENSMUSP00000139879	TRANSLATION	protein_coding	-	-	1	1009	16	12.165	0	366.4	0	-4,-5	-	-	6	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000110133	ENSMUSP00000105760	TRANSLATION	protein_coding	-	-	5	430	4	3.64	4.1	115.6	3	-2,-6	-	-	1.107	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000163134	ENSMUSP00000129678	TRANSLATION	protein_coding	-	CCDS56856.1	5	1571	16	15.31	9.4	566.4	3	2,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000066392	Nrxn3	ENSMUST00000110138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066392	Nrxn3	ENSMUST00000167103	ENSMUSP00000127407	TRANSLATION	protein_coding	-	-	5	1391	16	14.98	1.2	542.9	0	2,-3	-	-	16.002	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000238943	ENSMUSP00000159078	TRANSLATION	protein_coding	-	-	-	635	4	3.64	4.1	115.6	3	-2,-6	-	-	1.107	MINOR
ENSMUSG00000066392	Nrxn3	ENSMUST00000164072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000066392	Nrxn3	ENSMUST00000110130	ENSMUSP00000105757	TRANSLATION	protein_coding	-	CCDS79143.1	2	567	4	4.64	0.5	112.6	3	-2,-6	-	-	0	MINOR
ENSMUSG00000043673	Kcns3	ENSMUST00000055673	ENSMUSP00000060706	TRANSLATION	protein_coding	-	CCDS25813.1	1	491	0	0.36	7.5	264.2	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043673	Kcns3	ENSMUST00000164495	ENSMUSP00000129412	TRANSLATION	protein_coding	-	CCDS25813.1	1	491	0	0.36	7.5	264.2	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043673	Kcns3	ENSMUST00000217974	ENSMUSP00000152026	TRANSLATION	protein_coding	-	CCDS25813.1	5	491	0	0.36	7.5	264.2	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000083193	4930595D18Rik	ENSMUST00000121608	ENSMUSP00000113354	TRANSLATION	protein_coding	-	-	1	64	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000113805	Gm5788	ENSMUST00000220499	ENSMUSP00000152828	TRANSLATION	protein_coding	-	-	-	144	0	1	3	68.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000096407	Ighv6-5	ENSMUST00000179796	ENSMUSP00000136790	TRANSLATION	protein_coding	start/stop	-	-	99	3	1	0	47.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096407	Ighv6-5	ENSMUST00000193936	ENSMUSP00000141679	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.5	0	47.1	0	-2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000095612	Ighv5-4	ENSMUST00000103444	ENSMUSP00000100225	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	54	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000132901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000143960	ENSMUSP00000116391	TRANSLATION	nonsense_mediated_decay	start	-	3	71	0	0	0	74.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000136075	ENSMUSP00000121857	TRANSLATION	protein_coding	-	-	1	88	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000110489	ENSMUSP00000106115	TRANSLATION	protein_coding	-	-	5	575	0	0	0.5	910.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000132016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000044000	ENSMUSP00000035376	TRANSLATION	protein_coding	-	CCDS25971.1	1	574	0	0	0.5	905.3	0	-4,-7	-	-	5.694	PRINCIPAL:2
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000130635	ENSMUSP00000120109	TRANSLATION	protein_coding	stop	-	1	107	0	0	0	120.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000131033	ENSMUSP00000119777	TRANSLATION	nonsense_mediated_decay	-	-	1	203	0	0	0	280.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021098	4930447C04Rik	ENSMUST00000132067	ENSMUSP00000118104	TRANSLATION	protein_coding	stop	-	1	143	0	0	0	115.4	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000095470	Gm21863	ENSMUST00000179133	ENSMUSP00000135963	TRANSLATION	protein_coding	-	-	-	111	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056508	1700001K19Rik	ENSMUST00000070659	ENSMUSP00000068238	TRANSLATION	protein_coding	-	CCDS49175.1	1	219	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000056508	1700001K19Rik	ENSMUST00000222915	ENSMUSP00000152785	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020644	Id2	ENSMUST00000222667	ENSMUSP00000152069	TRANSLATION	protein_coding	-	-	-	155	0	1	0	47.2	0	-4,-1	-	-	12	MINOR
ENSMUSG00000020644	Id2	ENSMUST00000221761	ENSMUSP00000152052	TRANSLATION	protein_coding	-	CCDS25846.1	5	134	0	1	11.6	47.2	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000020644	Id2	ENSMUST00000020974	ENSMUSP00000020974	TRANSLATION	protein_coding	-	CCDS25846.1	1	134	0	1	11.6	47.2	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000060863	Tcl1b2	ENSMUST00000142230	ENSMUSP00000120367	TRANSLATION	protein_coding	-	-	5	85	0	0	0	84.6	0	-4,-5	-	-	4.164	MINOR
ENSMUSG00000060863	Tcl1b2	ENSMUST00000081379	ENSMUSP00000080115	TRANSLATION	protein_coding	-	CCDS36544.1	1	117	0	0	0.5	115.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060863	Tcl1b2	ENSMUST00000146174	ENSMUSP00000121354	TRANSLATION	nonsense_mediated_decay	-	-	1	117	0	0	0.5	115.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072919	Noxred1	ENSMUST00000021423	ENSMUSP00000021423	TRANSLATION	protein_coding	-	CCDS36502.1	5	366	17	0	1.5	34.3	0	-4,-5	-	-	11.652	PRINCIPAL:1
ENSMUSG00000072919	Noxred1	ENSMUST00000222480	ENSMUSP00000152486	TRANSLATION	protein_coding	-	CCDS36502.1	1	366	17	0	1.5	34.3	0	-4,-5	-	-	11.652	PRINCIPAL:1
ENSMUSG00000072919	Noxred1	ENSMUST00000221768	ENSMUSP00000152360	TRANSLATION	protein_coding	stop	-	5	183	17	0	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095554	Ighv1-16	ENSMUST00000103501	ENSMUSP00000100282	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	34.6	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000040867	Begain	ENSMUST00000239108	ENSMUSP00000159072	TRANSLATION	protein_coding	-	-	-	613	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000040867	Begain	ENSMUST00000190647	ENSMUSP00000140393	TRANSLATION	protein_coding	-	CCDS56862.1	1	619	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000040867	Begain	ENSMUST00000238841	ENSMUSP00000158999	TRANSLATION	protein_coding	-	-	-	600	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000040867	Begain	ENSMUST00000187230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040867	Begain	ENSMUST00000185745	ENSMUSP00000159014	TRANSLATION	protein_coding	stop	-	3	98	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000040867	Begain	ENSMUST00000209829	ENSMUSP00000148247	TRANSLATION	protein_coding	-	-	5	824	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000052812	Atad2b	ENSMUST00000045664	ENSMUSP00000047445	TRANSLATION	protein_coding	-	-	5	1460	15	8.52	0.5	200	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000052812	Atad2b	ENSMUST00000218859	ENSMUSP00000151695	TRANSLATION	nonsense_mediated_decay	start	-	1	259	5	1.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052812	Atad2b	ENSMUST00000219187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052812	Atad2b	ENSMUST00000218303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052812	Atad2b	ENSMUST00000220408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021241	Isca2	ENSMUST00000021667	ENSMUSP00000021667	TRANSLATION	protein_coding	-	CCDS49111.1	1	154	4	2.15	1.5	0	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000021241	Isca2	ENSMUST00000222166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021241	Isca2	ENSMUST00000222136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021241	Isca2	ENSMUST00000223089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021241	Isca2	ENSMUST00000222022	ENSMUSP00000152880	TRANSLATION	protein_coding	start	-	2	52	0	0.15	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021241	Isca2	ENSMUST00000222818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021241	Isca2	ENSMUST00000222449	ENSMUSP00000152379	TRANSLATION	protein_coding	-	-	2	53	0	0.15	0	0	0	-4,0	-	-	0.42	MINOR
ENSMUSG00000021241	Isca2	ENSMUST00000222982	ENSMUSP00000152679	TRANSLATION	protein_coding	start	-	3	146	4	2.15	0.5	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021241	Isca2	ENSMUST00000220726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021012	Zc3h14	ENSMUST00000110105	ENSMUSP00000105732	TRANSLATION	protein_coding	-	CCDS26100.1	1	735	20	0.885	6.3	89.9	0	-4,-5	-	-	20.445	PRINCIPAL:3
ENSMUSG00000021012	Zc3h14	ENSMUST00000222461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021012	Zc3h14	ENSMUST00000223451	ENSMUSP00000152382	TRANSLATION	nonsense_mediated_decay	start	-	5	180	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021012	Zc3h14	ENSMUST00000222146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021012	Zc3h14	ENSMUST00000222632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021012	Zc3h14	ENSMUST00000021399	ENSMUSP00000021399	TRANSLATION	protein_coding	-	CCDS49139.1	1	309	20	0.885	7.5	89.9	0	-4,-7	-	-	21	ALTERNATIVE:1
ENSMUSG00000021012	Zc3h14	ENSMUST00000221576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021012	Zc3h14	ENSMUST00000110104	ENSMUSP00000105731	TRANSLATION	protein_coding	-	CCDS26099.1	5	604	20	0.885	6.3	89.9	0	-4,-5	-	-	20.445	ALTERNATIVE:1
ENSMUSG00000021012	Zc3h14	ENSMUST00000223083	ENSMUSP00000152816	TRANSLATION	protein_coding	stop	-	2	269	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021012	Zc3h14	ENSMUST00000221532	ENSMUSP00000152746	TRANSLATION	protein_coding	start	-	5	238	20	0.885	0	89.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021012	Zc3h14	ENSMUST00000220660	ENSMUSP00000152841	TRANSLATION	nonsense_mediated_decay	start	-	5	70	8	0.285	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021012	Zc3h14	ENSMUST00000221558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021012	Zc3h14	ENSMUST00000057000	ENSMUSP00000055879	TRANSLATION	protein_coding	-	CCDS49138.1	1	579	20	0.885	4.1	89.9	0	-4,-5	-	-	19.431	MINOR
ENSMUSG00000096250	Ighd2-6	ENSMUST00000178230	ENSMUSP00000141615	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076621	Ighj1	ENSMUST00000103430	ENSMUSP00000141217	TRANSLATION	IG_J_gene	start/stop	-	-	18	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000002996	Hbp1	ENSMUST00000167458	ENSMUSP00000131983	TRANSLATION	protein_coding	-	CCDS25868.2	1	474	0	5.55	0.5	114.6	0	-4,-5	-	-	6.738	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000176103	ENSMUSP00000135508	TRANSLATION	protein_coding	-	-	1	271	0	2.05	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000176138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002996	Hbp1	ENSMUST00000176643	ENSMUSP00000135537	TRANSLATION	protein_coding	start/stop	-	3	256	0	2.5	0	97	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000175666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002996	Hbp1	ENSMUST00000176084	ENSMUSP00000135489	TRANSLATION	protein_coding	stop	-	3	230	0	1.3	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000175686	ENSMUSP00000135080	TRANSLATION	protein_coding	-	-	1	375	0	4.55	0	114.6	0	-4,-6	-	-	4.734	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000176520	ENSMUSP00000135155	TRANSLATION	protein_coding	stop	-	5	288	0	3.05	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002996	Hbp1	ENSMUST00000172314	ENSMUSP00000131158	TRANSLATION	protein_coding	-	CCDS25867.2	1	526	0	6.55	6.3	169	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034145	Tmem63c	ENSMUST00000156162	ENSMUSP00000122346	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000034145	Tmem63c	ENSMUST00000131878	ENSMUSP00000117023	TRANSLATION	protein_coding	-	CCDS26069.1	5	802	0	0	1.5	359.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034145	Tmem63c	ENSMUST00000154801	ENSMUSP00000119898	TRANSLATION	nonsense_mediated_decay	-	-	1	179	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000034145	Tmem63c	ENSMUST00000146292	ENSMUSP00000119872	TRANSLATION	protein_coding	-	CCDS26069.1	1	802	0	0	1.5	359.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034145	Tmem63c	ENSMUST00000110187	ENSMUSP00000105816	TRANSLATION	protein_coding	-	CCDS26069.1	1	802	0	0	1.5	359.4	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021224	Numb	ENSMUST00000129335	ENSMUSP00000119303	TRANSLATION	protein_coding	-	CCDS49108.1	1	653	0	4.4396	4.1	222.1	0	-4,-7	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000021224	Numb	ENSMUST00000085215	ENSMUSP00000082311	TRANSLATION	nonsense_mediated_decay	-	-	1	322	0	4.4396	0	211.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000154043	ENSMUSP00000117899	TRANSLATION	protein_coding	-	CCDS70401.1	1	642	0	4.4	4.1	203.7	0	-4,-7	-	-	11.988	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000155112	ENSMUSP00000116863	TRANSLATION	protein_coding	stop	-	5	163	0	4.0396	0	118.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000222439	ENSMUSP00000152499	TRANSLATION	protein_coding	stop	-	3	36	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000021647	ENSMUSP00000021647	TRANSLATION	protein_coding	-	CCDS26032.1	1	604	0	4.4396	4.1	222.1	0	-4,-7	-	-	13.17	PRINCIPAL:3
ENSMUSG00000021224	Numb	ENSMUST00000135962	ENSMUSP00000122977	TRANSLATION	protein_coding	stop	-	5	148	0	3.5396	0	104.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000126943	ENSMUSP00000122960	TRANSLATION	protein_coding	stop	-	3	65	0	1.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000136848	ENSMUSP00000122597	TRANSLATION	protein_coding	stop	-	3	113	0	2.75	0	54.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000117217	ENSMUSP00000113591	TRANSLATION	protein_coding	-	CCDS70400.1	1	593	0	4.4	6.3	203.7	0	-4,-7	-	-	12.818	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000110298	ENSMUSP00000105927	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	1.75	0	23.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021224	Numb	ENSMUST00000125089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021252	Erg28	ENSMUST00000148323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021252	Erg28	ENSMUST00000131681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021252	Erg28	ENSMUST00000124311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021252	Erg28	ENSMUST00000142331	ENSMUSP00000114987	TRANSLATION	protein_coding	stop	-	3	54	0	0	0	41.7	2	0,-4	-	-	-1	MINOR
ENSMUSG00000021252	Erg28	ENSMUST00000021676	ENSMUSP00000021676	TRANSLATION	protein_coding	-	CCDS26063.1	1	140	0	0	12.8	134.4	4	0,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000093955	Ighv1-34	ENSMUST00000103512	ENSMUSP00000100293	TRANSLATION	IG_V_gene	stop	-	-	117	5	1.5	0	62.5	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000001175	Calm1	ENSMUST00000153524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001175	Calm1	ENSMUST00000110082	ENSMUSP00000105709	TRANSLATION	protein_coding	-	CCDS36523.1	1	149	24	4.16	21.5	166.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000001175	Calm1	ENSMUST00000127300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001175	Calm1	ENSMUST00000001204	ENSMUSP00000001204	TRANSLATION	protein_coding	-	-	1	113	19	3.08	6.9	108.8	0	-4,-5	-	-	10.218	MINOR
ENSMUSG00000049751	Rpl36al	ENSMUST00000110619	ENSMUSP00000106249	TRANSLATION	protein_coding	-	CCDS25946.1	-	106	2	0.8	19.5	137.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049751	Rpl36al	ENSMUST00000054544	ENSMUSP00000059766	TRANSLATION	protein_coding	-	CCDS25946.1	1	106	2	0.8	19.5	137.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000049751	Rpl36al	ENSMUST00000110620	ENSMUSP00000106250	TRANSLATION	protein_coding	-	CCDS25946.1	2	106	2	0.8	19.5	137.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021263	Degs2	ENSMUST00000167978	ENSMUSP00000125891	TRANSLATION	protein_coding	-	CCDS49170.1	1	286	0	0	0.5	142.6	4	-4,-6	-	-	5.658	MINOR
ENSMUSG00000021263	Degs2	ENSMUST00000222255	ENSMUSP00000152122	TRANSLATION	protein_coding	start	-	3	98	0	0	0	42.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000021263	Degs2	ENSMUST00000021691	ENSMUSP00000021691	TRANSLATION	protein_coding	-	CCDS26162.1	1	323	0	0	3.9	148.3	4	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000021111	Papola	ENSMUST00000166329	ENSMUSP00000131725	TRANSLATION	nonsense_mediated_decay	-	-	5	111	3	2.83	0	56.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000170002	ENSMUSP00000126275	TRANSLATION	protein_coding	-	CCDS84000.1	5	718	13	14.11	2.7	510.1	1	-4,-2	-	-	18.68	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000163805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021111	Papola	ENSMUST00000021535	ENSMUSP00000021535	TRANSLATION	nonsense_mediated_decay	-	-	1	739	13	14.11	6	510.1	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000169524	ENSMUSP00000130798	TRANSLATION	nonsense_mediated_decay	start	-	3	95	6	2.5	0	185.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000170831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021111	Papola	ENSMUST00000166735	ENSMUSP00000128908	TRANSLATION	protein_coding	-	-	1	293	12	7.58	0	313.7	1	-4,-2	-	-	5.334	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000172040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021111	Papola	ENSMUST00000172089	ENSMUSP00000131729	TRANSLATION	protein_coding	start	-	2	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000169938	ENSMUSP00000130687	TRANSLATION	nonsense_mediated_decay	-	-	1	168	5	4.33	0	103.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000164326	ENSMUSP00000125818	TRANSLATION	nonsense_mediated_decay	-	-	3	66	0	1	0	34.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000168186	ENSMUSP00000128402	TRANSLATION	protein_coding	-	-	1	732	13	14.11	0	510.1	1	-4,-2	-	-	18	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000163473	ENSMUSP00000131668	TRANSLATION	protein_coding	-	-	5	693	13	14.11	2.4	510.1	1	-4,-2	-	-	18.56	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000170540	ENSMUSP00000130714	TRANSLATION	protein_coding	stop	-	2	23	0	0.75	0	38.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000164798	ENSMUSP00000125898	TRANSLATION	protein_coding	start/stop	-	5	322	0	4.95	0	90.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000166471	ENSMUSP00000132353	TRANSLATION	protein_coding	start	-	5	419	1	5.45	0	132.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021111	Papola	ENSMUST00000166498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021111	Papola	ENSMUST00000170189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021111	Papola	ENSMUST00000109901	ENSMUSP00000105527	TRANSLATION	protein_coding	-	CCDS49163.1	1	739	13	14.11	6	510.1	1	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000021111	Papola	ENSMUST00000165584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020605	Hs1bp3	ENSMUST00000020927	ENSMUSP00000020927	TRANSLATION	protein_coding	-	CCDS49024.1	1	395	0	0	0.5	56.1	0	-4,-2	-	-	5.892	PRINCIPAL:1
ENSMUSG00000020605	Hs1bp3	ENSMUST00000220300	ENSMUSP00000151390	TRANSLATION	protein_coding	stop	-	3	157	0	0	0	57.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020605	Hs1bp3	ENSMUST00000220199	ENSMUSP00000151262	TRANSLATION	protein_coding	stop	-	2	109	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035954	Dock4	ENSMUST00000220783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000222287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000222860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000221758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000223290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000220850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000221731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000221664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000220912	ENSMUSP00000152420	TRANSLATION	protein_coding	-	-	1	1940	0	15.67	0.5	919.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035954	Dock4	ENSMUST00000222798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035954	Dock4	ENSMUST00000037488	ENSMUSP00000047387	TRANSLATION	protein_coding	-	CCDS25895.1	1	1978	0	15.67	1.7	919.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000095079	Igha	ENSMUST00000194738	ENSMUSP00000142171	TRANSLATION	IG_C_gene	start	-	-	389	7	3.3	0	155.6	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000095079	Igha	ENSMUST00000178282	ENSMUSP00000137226	TRANSLATION	IG_C_gene	start	-	-	344	7	3.5	0	155.6	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000034168	Irf2bpl	ENSMUST00000038422	ENSMUSP00000041070	TRANSLATION	protein_coding	-	CCDS26068.1	-	775	8	0.2	0.5	119.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020564	Atxn7l1	ENSMUST00000154742	ENSMUSP00000122982	TRANSLATION	protein_coding	-	-	1	741	5	1.35	0	95.8	0	-4,-1	-	-	15.75	MINOR
ENSMUSG00000020564	Atxn7l1	ENSMUST00000110824	ENSMUSP00000106448	TRANSLATION	protein_coding	-	CCDS25874.2	1	146	3	0	6.3	0	0	-4,-6	-	-	4.25	MINOR
ENSMUSG00000020564	Atxn7l1	ENSMUST00000133549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020564	Atxn7l1	ENSMUST00000090597	ENSMUSP00000088085	TRANSLATION	protein_coding	-	CCDS25875.1	1	739	5	1.35	0.5	95.8	0	-4,-1	-	-	15.75	MINOR
ENSMUSG00000020564	Atxn7l1	ENSMUST00000136644	ENSMUSP00000151520	TRANSLATION	protein_coding	-	-	1	142	3	0	0	0	0	-4,-7	-	-	2.25	MINOR
ENSMUSG00000020564	Atxn7l1	ENSMUST00000125192	ENSMUSP00000118777	TRANSLATION	protein_coding	-	-	5	824	8	1.35	0	95.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000020564	Atxn7l1	ENSMUST00000077456	ENSMUSP00000076668	TRANSLATION	protein_coding	-	-	1	123	3	0	0	0	0	-4,-6	-	-	2.25	MINOR
ENSMUSG00000020564	Atxn7l1	ENSMUST00000142184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020564	Atxn7l1	ENSMUST00000130740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020564	Atxn7l1	ENSMUST00000146040	ENSMUSP00000122156	TRANSLATION	protein_coding	-	-	5	927	8	1.35	0	95.8	0	-4,-6	-	-	18	PRINCIPAL:5
ENSMUSG00000020564	Atxn7l1	ENSMUST00000145589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020564	Atxn7l1	ENSMUST00000126275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020564	Atxn7l1	ENSMUST00000155386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020564	Atxn7l1	ENSMUST00000144586	ENSMUSP00000151570	TRANSLATION	protein_coding	-	-	1	52	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000021069	Pygl	ENSMUST00000162613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021069	Pygl	ENSMUST00000166609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021069	Pygl	ENSMUST00000222093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021069	Pygl	ENSMUST00000161840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021069	Pygl	ENSMUST00000071250	ENSMUSP00000071231	TRANSLATION	protein_coding	-	CCDS25957.1	1	850	31	18.83	6.3	1151.9	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000021069	Pygl	ENSMUST00000161083	ENSMUSP00000125585	TRANSLATION	protein_coding	-	-	1	759	24	17.5	0	1151.9	0	-4,-6	-	-	10.674	MINOR
ENSMUSG00000099418	Gm6657	ENSMUST00000188791	ENSMUSP00000147743	TRANSLATION	protein_coding	-	-	5	176	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000099418	Gm6657	ENSMUST00000185497	ENSMUSP00000147287	TRANSLATION	nonsense_mediated_decay	start	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099418	Gm6657	ENSMUST00000211288	ENSMUSP00000147546	TRANSLATION	protein_coding	-	-	5	277	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000099418	Gm6657	ENSMUST00000187283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021120	Pigh	ENSMUST00000072154	ENSMUSP00000072018	TRANSLATION	protein_coding	-	CCDS26006.1	1	188	0	0	7.6	74.5	2	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000021120	Pigh	ENSMUST00000217998	ENSMUSP00000151930	TRANSLATION	protein_coding	-	-	1	167	0	0	0	74.5	2	-4,-6	-	-	6	MINOR
ENSMUSG00000021120	Pigh	ENSMUST00000217979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035021	Baz1a	ENSMUST00000038926	ENSMUSP00000039757	TRANSLATION	protein_coding	-	-	5	1555	8	3	0.5	413.9	0	-4,-7	-	-	17.538	ALTERNATIVE:2
ENSMUSG00000035021	Baz1a	ENSMUST00000173529	ENSMUSP00000134445	TRANSLATION	protein_coding	stop	-	2	81	0	0	0	76.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035021	Baz1a	ENSMUST00000173433	ENSMUSP00000133478	TRANSLATION	protein_coding	-	CCDS56838.1	5	1552	8	3	1.5	421.6	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000035021	Baz1a	ENSMUST00000174225	ENSMUSP00000133324	TRANSLATION	nonsense_mediated_decay	start	-	2	79	0	0	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035021	Baz1a	ENSMUST00000173177	ENSMUSP00000133796	TRANSLATION	protein_coding	stop	-	2	86	0	0	0	82.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035021	Baz1a	ENSMUST00000172875	ENSMUSP00000134384	TRANSLATION	protein_coding	stop	-	3	172	0	0	0	119.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035021	Baz1a	ENSMUST00000173453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035021	Baz1a	ENSMUST00000173176	ENSMUSP00000134207	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095656	Ighd2-8	ENSMUST00000180001	ENSMUSP00000141399	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000052392	Acot4	ENSMUST00000221860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052392	Acot4	ENSMUST00000021652	ENSMUSP00000021652	TRANSLATION	protein_coding	-	CCDS26035.1	1	421	4	4	1.5	423.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000052392	Acot4	ENSMUST00000128162	ENSMUSP00000152805	TRANSLATION	protein_coding	start	-	2	162	0	2.066	0	78.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090935	Synj2bp	ENSMUST00000164431	ENSMUSP00000129053	TRANSLATION	protein_coding	-	-	1	40	0	0.75	0	0	0	-4,-5	-	-	1.2	MINOR
ENSMUSG00000090935	Synj2bp	ENSMUST00000114201	ENSMUSP00000109839	TRANSLATION	protein_coding	-	-	1	101	0	2.18	0	75.1	0	-4,-5	-	-	9.75	MINOR
ENSMUSG00000090935	Synj2bp	ENSMUST00000163402	ENSMUSP00000129224	TRANSLATION	protein_coding	-	CCDS26021.1	1	145	0	3.15	10.8	79.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000090935	Synj2bp	ENSMUST00000019829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090935	Synj2bp	ENSMUST00000169158	ENSMUSP00000130691	TRANSLATION	protein_coding	-	CCDS83979.1	1	118	0	2.93	0.5	79.2	0	-4,-5	-	-	11.562	MINOR
ENSMUSG00000021133	Susd6	ENSMUST00000219720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021133	Susd6	ENSMUST00000220238	ENSMUSP00000151831	TRANSLATION	protein_coding	-	-	1	323	0	0	1.5	58.4	1	-4,-7	-	-	6.244	ALTERNATIVE:2
ENSMUSG00000021133	Susd6	ENSMUST00000068519	ENSMUSP00000064961	TRANSLATION	protein_coding	-	CCDS26016.1	1	302	0	0	5.1	34.9	1	-1,-5	-	-	5.588	PRINCIPAL:2
ENSMUSG00000045404	Kcnk13	ENSMUST00000160413	ENSMUSP00000123916	TRANSLATION	protein_coding	-	CCDS26106.1	1	405	0	0.8	3.9	115.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000045404	Kcnk13	ENSMUST00000162221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045404	Kcnk13	ENSMUST00000049788	ENSMUSP00000051846	TRANSLATION	protein_coding	-	CCDS26106.1	1	405	0	0.8	3.9	115.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000045404	Kcnk13	ENSMUST00000177549	ENSMUSP00000136882	TRANSLATION	protein_coding	-	CCDS26106.1	5	405	0	0.8	3.9	115.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000041645	Ddx24	ENSMUST00000221211	ENSMUSP00000152206	TRANSLATION	protein_coding	-	-	1	791	13	3.75	0	218.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000041645	Ddx24	ENSMUST00000220975	ENSMUSP00000152366	TRANSLATION	non_stop_decay	stop	-	1	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041645	Ddx24	ENSMUST00000222782	ENSMUSP00000152745	TRANSLATION	protein_coding	start/stop	-	5	176	1	2.37	0	73.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041645	Ddx24	ENSMUST00000044923	ENSMUSP00000040890	TRANSLATION	protein_coding	-	CCDS26129.1	1	857	13	3.75	0.5	218.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000041645	Ddx24	ENSMUST00000220481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041645	Ddx24	ENSMUST00000223233	ENSMUSP00000152058	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041645	Ddx24	ENSMUST00000110001	ENSMUSP00000105628	TRANSLATION	protein_coding	-	CCDS49152.1	1	903	13	3.75	0.5	218.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000041645	Ddx24	ENSMUST00000220705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041645	Ddx24	ENSMUST00000222715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021281	Tnfaip2	ENSMUST00000127207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021281	Tnfaip2	ENSMUST00000156003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021281	Tnfaip2	ENSMUST00000133865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021281	Tnfaip2	ENSMUST00000174298	ENSMUSP00000133317	TRANSLATION	nonsense_mediated_decay	start	-	5	128	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021281	Tnfaip2	ENSMUST00000102745	ENSMUSP00000099806	TRANSLATION	protein_coding	-	CCDS26178.2	1	691	0	11.43	1.5	373.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021281	Tnfaip2	ENSMUST00000127028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021281	Tnfaip2	ENSMUST00000129467	ENSMUSP00000133274	TRANSLATION	protein_coding	stop	-	5	115	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021281	Tnfaip2	ENSMUST00000173581	ENSMUSP00000133807	TRANSLATION	nonsense_mediated_decay	start	-	5	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021281	Tnfaip2	ENSMUST00000109792	ENSMUSP00000105415	TRANSLATION	protein_coding	-	-	1	708	0	11.18	0	351.1	0	-4,-2	-	-	10.176	MINOR
ENSMUSG00000021281	Tnfaip2	ENSMUST00000172783	ENSMUSP00000133635	TRANSLATION	nonsense_mediated_decay	-	-	5	151	0	0.6	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021281	Tnfaip2	ENSMUST00000174692	ENSMUSP00000133512	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020585	Laptm4a	ENSMUST00000020909	ENSMUSP00000020909	TRANSLATION	protein_coding	-	CCDS36402.1	1	308	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000001270	Ckb	ENSMUST00000223099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001270	Ckb	ENSMUST00000220888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001270	Ckb	ENSMUST00000222513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001270	Ckb	ENSMUST00000222705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001270	Ckb	ENSMUST00000001304	ENSMUSP00000001304	TRANSLATION	protein_coding	-	CCDS26183.1	1	381	23	7	15.3	388	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000060716	Plekhh1	ENSMUST00000217954	ENSMUSP00000151944	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060716	Plekhh1	ENSMUST00000219956	ENSMUSP00000151747	TRANSLATION	protein_coding	-	CCDS49097.1	1	1356	0	7.305	0.5	231.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060716	Plekhh1	ENSMUST00000219946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060716	Plekhh1	ENSMUST00000039928	ENSMUSP00000049460	TRANSLATION	protein_coding	-	CCDS49097.1	1	1356	0	7.305	0.5	231.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096150	Ighv1-85	ENSMUST00000103552	ENSMUSP00000100333	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	60.4	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000041712	Ubr7	ENSMUST00000046404	ENSMUSP00000041247	TRANSLATION	protein_coding	-	CCDS26124.1	1	425	7	1.32	1.5	47.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000007411	Mark3	ENSMUST00000075281	ENSMUSP00000074757	TRANSLATION	protein_coding	-	CCDS26182.1	1	729	18	9.74	11.8	350.3	0	-4,-5	-	-	21.376	ALTERNATIVE:1
ENSMUSG00000007411	Mark3	ENSMUST00000221009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007411	Mark3	ENSMUST00000221923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007411	Mark3	ENSMUST00000221390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007411	Mark3	ENSMUST00000221459	ENSMUSP00000152483	TRANSLATION	protein_coding	-	-	5	753	18	9.74	13.8	350.3	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000007411	Mark3	ENSMUST00000221631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007411	Mark3	ENSMUST00000221841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007411	Mark3	ENSMUST00000221448	ENSMUSP00000152377	TRANSLATION	nonsense_mediated_decay	-	-	2	111	8	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007411	Mark3	ENSMUST00000222870	ENSMUSP00000152833	TRANSLATION	nonsense_mediated_decay	start	-	3	54	1	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007411	Mark3	ENSMUST00000084953	ENSMUSP00000082017	TRANSLATION	protein_coding	-	CCDS26181.1	1	744	18	9.74	11.8	350.3	0	-4,-5	-	-	21.376	PRINCIPAL:4
ENSMUSG00000007411	Mark3	ENSMUST00000222080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007411	Mark3	ENSMUST00000221753	ENSMUSP00000152727	TRANSLATION	protein_coding	-	-	5	797	18	9.74	8.4	350.3	0	-4,-5	-	-	20.312	MINOR
ENSMUSG00000021096	Ppm1a	ENSMUST00000223410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021096	Ppm1a	ENSMUST00000221628	ENSMUSP00000152372	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021096	Ppm1a	ENSMUST00000222790	ENSMUSP00000152472	TRANSLATION	protein_coding	stop	-	3	27	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021096	Ppm1a	ENSMUST00000223221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021096	Ppm1a	ENSMUST00000021514	ENSMUSP00000021514	TRANSLATION	protein_coding	-	CCDS25970.1	1	382	12	5.66	15.8	414.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021096	Ppm1a	ENSMUST00000222920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021096	Ppm1a	ENSMUST00000222896	ENSMUSP00000152116	TRANSLATION	protein_coding	-	-	1	323	12	3.75	1.2	349.7	0	-4,-5	-	-	10.346	MINOR
ENSMUSG00000021096	Ppm1a	ENSMUST00000221502	ENSMUSP00000152650	TRANSLATION	protein_coding	stop	-	5	69	5	1.75	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034912	Mdga2	ENSMUST00000223141	ENSMUSP00000152613	TRANSLATION	protein_coding	-	CCDS25945.1	2	949	0	6.484	1.5	391	1	3,-1	-	-	12.132	PRINCIPAL:2
ENSMUSG00000034912	Mdga2	ENSMUST00000179729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034912	Mdga2	ENSMUST00000223289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034912	Mdga2	ENSMUST00000037181	ENSMUSP00000046761	TRANSLATION	protein_coding	-	-	1	1025	0	6.484	4.8	391	1	-3,-1	-	-	13	ALTERNATIVE:1
ENSMUSG00000034912	Mdga2	ENSMUST00000179025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034912	Mdga2	ENSMUST00000178724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034912	Mdga2	ENSMUST00000179577	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034912	Mdga2	ENSMUST00000101379	ENSMUSP00000098930	TRANSLATION	nonsense_mediated_decay	start	-	1	134	0	0.4	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000034912	Mdga2	ENSMUST00000177690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034912	Mdga2	ENSMUST00000222623	ENSMUSP00000152548	TRANSLATION	protein_coding	-	-	5	297	0	2.2	0	167.7	1	-4,-5	-	-	0	MINOR
ENSMUSG00000034912	Mdga2	ENSMUST00000222987	ENSMUSP00000152049	TRANSLATION	protein_coding	-	-	5	319	0	2.36	0	167.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034912	Mdga2	ENSMUST00000113942	ENSMUSP00000109575	TRANSLATION	protein_coding	start	-	-	140	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034912	Mdga2	ENSMUST00000178814	ENSMUSP00000137608	TRANSLATION	protein_coding	start	-	2	1009	0	6.484	0	391	1	-2,-4	-	-	-1	MINOR
ENSMUSG00000072949	Acot1	ENSMUST00000220901	ENSMUSP00000152857	TRANSLATION	protein_coding	start	-	2	152	0	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072949	Acot1	ENSMUST00000168120	ENSMUSP00000126448	TRANSLATION	protein_coding	-	CCDS36487.1	1	419	4	4.5	0.5	426.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000072949	Acot1	ENSMUST00000222591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072949	Acot1	ENSMUST00000222862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056459	Zbtb25	ENSMUST00000176187	ENSMUSP00000135458	TRANSLATION	protein_coding	stop	-	3	140	0	2.542	0	74.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056459	Zbtb25	ENSMUST00000167011	ENSMUSP00000128471	TRANSLATION	protein_coding	-	CCDS25991.2	2	439	8	2.542	7.6	88.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000056459	Zbtb25	ENSMUST00000176967	ENSMUSP00000135434	TRANSLATION	protein_coding	stop	-	2	101	0	1.876	0	72.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056459	Zbtb25	ENSMUST00000176278	ENSMUSP00000134748	TRANSLATION	protein_coding	-	CCDS25991.2	1	439	8	2.542	7.6	88.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000056459	Zbtb25	ENSMUST00000176102	ENSMUSP00000135853	TRANSLATION	protein_coding	-	CCDS25991.2	5	439	8	2.542	7.6	88.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000056459	Zbtb25	ENSMUST00000176509	ENSMUSP00000135817	TRANSLATION	protein_coding	-	-	2	67	0	1	0	49.4	0	-4,-6	-	-	5.718	MINOR
ENSMUSG00000094029	Ighv3-3	ENSMUST00000103476	ENSMUSP00000100257	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	51.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094029	Ighv3-3	ENSMUST00000191693	ENSMUSP00000141593	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.3	0	51.4	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000021238	Aldh6a1	ENSMUST00000222641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021238	Aldh6a1	ENSMUST00000222656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021238	Aldh6a1	ENSMUST00000085192	ENSMUSP00000082288	TRANSLATION	protein_coding	-	CCDS26046.1	1	535	27	10.18	0.5	460.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021238	Aldh6a1	ENSMUST00000220491	ENSMUSP00000152269	TRANSLATION	protein_coding	stop	-	5	135	0	2.83	0	76.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021238	Aldh6a1	ENSMUST00000222062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095981	Ighv10-1	ENSMUST00000103492	ENSMUSP00000100273	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.5	0	49.3	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000089922	Gm43517	ENSMUST00000110746	ENSMUSP00000106374	TRANSLATION	protein_coding,RT	start	-	2	339	0	0.2	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021087	Rtn1	ENSMUST00000150156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021087	Rtn1	ENSMUST00000137990	ENSMUSP00000120033	TRANSLATION	protein_coding	start	-	1	253	0	1.6	0	153.7	1	-4,0	-	-	-1	MINOR
ENSMUSG00000021087	Rtn1	ENSMUST00000221756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021087	Rtn1	ENSMUST00000078505	ENSMUSP00000077594	TRANSLATION	protein_coding	-	CCDS25968.1	1	780	0	1.6	1.5	153.7	1	-4,-5	-	-	12.124	MINOR
ENSMUSG00000021087	Rtn1	ENSMUST00000021497	ENSMUSP00000021497	TRANSLATION	protein_coding	-	CCDS25969.1	1	208	0	1.6	17	153.7	1	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021087	Rtn1	ENSMUST00000144181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096410	Ighv1-19	ENSMUST00000193855	ENSMUSP00000141737	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	57.7	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096410	Ighv1-19	ENSMUST00000103505	ENSMUSP00000100286	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.5	0	57.7	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000048251	Bcl11b	ENSMUST00000066060	ENSMUSP00000068258	TRANSLATION	protein_coding	-	CCDS36553.1	1	884	22	0	1.5	110.4	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000048251	Bcl11b	ENSMUST00000109891	ENSMUSP00000105517	TRANSLATION	protein_coding	-	CCDS36552.1	1	812	22	0	1.5	110.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000048251	Bcl11b	ENSMUST00000109887	ENSMUSP00000105513	TRANSLATION	protein_coding	-	CCDS70419.1	1	690	22	0	0.5	110.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000020607	Lratd1	ENSMUST00000221405	ENSMUSP00000152642	TRANSLATION	protein_coding	stop	-	5	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020607	Lratd1	ENSMUST00000020926	ENSMUSP00000020926	TRANSLATION	protein_coding	-	CCDS25820.1	1	292	0	0.12	3.9	0	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000075707	Dio3	ENSMUST00000097228	ENSMUSP00000094864	TRANSLATION	protein_coding	-	-	-	131	0	1	0	221.5	0	-4,-7	-	-	3.336	MINOR
ENSMUSG00000075707	Dio3	ENSMUST00000173014	ENSMUSP00000133920	TRANSLATION	protein_coding	-	CCDS26171.2	-	304	0	1.8	6.3	412.3	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021099	Six6	ENSMUST00000021519	ENSMUSP00000021519	TRANSLATION	protein_coding	-	CCDS25972.1	1	246	0	1	17.3	204.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000020594	Pum2	ENSMUST00000163730	ENSMUSP00000131914	TRANSLATION	protein_coding	stop	-	5	185	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000170037	ENSMUSP00000127786	TRANSLATION	nonsense_mediated_decay	-	-	5	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000171418	ENSMUSP00000126616	TRANSLATION	protein_coding	start/stop	-	3	235	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000169089	ENSMUSP00000132122	TRANSLATION	protein_coding	-	CCDS49026.1	5	985	0	8	3.9	243	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000020594	Pum2	ENSMUST00000164818	ENSMUSP00000129243	TRANSLATION	protein_coding	start/stop	-	5	222	0	4	0	134.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000171608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020594	Pum2	ENSMUST00000111123	ENSMUSP00000106752	TRANSLATION	protein_coding	-	CCDS49025.1	1	1064	0	8	3.9	243	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000020594	Pum2	ENSMUST00000111122	ENSMUSP00000106751	TRANSLATION	protein_coding	-	CCDS49025.1	1	1064	0	8	3.9	243	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000020594	Pum2	ENSMUST00000163569	ENSMUSP00000131074	TRANSLATION	protein_coding	-	CCDS25802.1	1	1066	0	8	3.9	241.2	0	-4,-5	-	-	12.892	PRINCIPAL:3
ENSMUSG00000020594	Pum2	ENSMUST00000020915	ENSMUSP00000020915	TRANSLATION	protein_coding	-	CCDS79105.1	1	980	0	8	0.5	243	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000020594	Pum2	ENSMUST00000169177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020594	Pum2	ENSMUST00000169750	ENSMUSP00000126876	TRANSLATION	protein_coding	stop	-	5	262	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000168361	ENSMUSP00000128292	TRANSLATION	protein_coding	-	CCDS25802.1	5	1066	0	8	3.9	241.2	0	-4,-5	-	-	12.892	PRINCIPAL:3
ENSMUSG00000020594	Pum2	ENSMUST00000166965	ENSMUSP00000130320	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020594	Pum2	ENSMUST00000178015	ENSMUSP00000137020	TRANSLATION	protein_coding	-	CCDS49026.1	5	985	0	8	3.9	243	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000020594	Pum2	ENSMUST00000165293	ENSMUSP00000132170	TRANSLATION	nonsense_mediated_decay	-	-	1	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095897	Ighd2-5	ENSMUST00000178549	ENSMUSP00000141697	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000051890	Klhdc1	ENSMUST00000173419	ENSMUSP00000134180	TRANSLATION	nonsense_mediated_decay	-	-	5	303	0	5.48	1	111.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051890	Klhdc1	ENSMUST00000146389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051890	Klhdc1	ENSMUST00000127791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051890	Klhdc1	ENSMUST00000063445	ENSMUSP00000068046	TRANSLATION	protein_coding	-	CCDS25949.1	1	406	0	5.84	1.5	111.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000103033	Ighv5-12-4	ENSMUST00000195381	ENSMUSP00000141539	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	52.9	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000052632	Asap2	ENSMUST00000090834	ENSMUSP00000088344	TRANSLATION	protein_coding	-	-	5	809	0	12.715	0	175.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052632	Asap2	ENSMUST00000101562	ENSMUSP00000099098	TRANSLATION	protein_coding	-	CCDS56832.1	1	958	4	16.215	0.5	333	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000052632	Asap2	ENSMUST00000064595	ENSMUSP00000063217	TRANSLATION	protein_coding	-	CCDS49037.1	5	1000	4	16.215	0.5	329.6	0	-4,-5	-	-	15.796	PRINCIPAL:4
ENSMUSG00000052632	Asap2	ENSMUST00000174530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052632	Asap2	ENSMUST00000050990	ENSMUSP00000054631	TRANSLATION	protein_coding	-	CCDS49036.1	5	955	4	16.215	0.5	333	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000093818	Ighd3-1	ENSMUST00000180266	ENSMUSP00000141755	TRANSLATION	IG_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021254	Gpatch2l	ENSMUST00000220810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021254	Gpatch2l	ENSMUST00000220646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021254	Gpatch2l	ENSMUST00000071106	ENSMUSP00000065858	TRANSLATION	protein_coding	-	-	1	408	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000021254	Gpatch2l	ENSMUST00000221368	ENSMUSP00000152284	TRANSLATION	protein_coding	-	CCDS26065.1	1	482	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000021254	Gpatch2l	ENSMUST00000222299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021067	Sav1	ENSMUST00000222827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021067	Sav1	ENSMUST00000220735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021067	Sav1	ENSMUST00000021467	ENSMUSP00000021467	TRANSLATION	protein_coding	-	CCDS25956.1	1	386	0	1	11.5	39.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000036188	Ankmy2	ENSMUST00000041640	ENSMUSP00000039484	TRANSLATION	protein_coding	-	CCDS25885.1	1	440	8	4.11	7.5	85.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036188	Ankmy2	ENSMUST00000220580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036188	Ankmy2	ENSMUST00000220788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021265	Slc25a29	ENSMUST00000139714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021265	Slc25a29	ENSMUST00000137023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021265	Slc25a29	ENSMUST00000021693	ENSMUSP00000021693	TRANSLATION	protein_coding	-	CCDS26164.1	1	306	0	1.58	1.5	218.2	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094787	Ighv1-54	ENSMUST00000103525	ENSMUSP00000100306	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	54.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000060807	Serpina6	ENSMUST00000044159	ENSMUSP00000044033	TRANSLATION	protein_coding	-	CCDS26135.1	1	397	7	4.6	0.5	319.1	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060807	Serpina6	ENSMUST00000152517	ENSMUSP00000119290	TRANSLATION	protein_coding	stop	-	3	38	1	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000066359	Tcl1b1	ENSMUST00000085043	ENSMUSP00000082118	TRANSLATION	protein_coding	-	CCDS36545.1	1	116	0	0.86	0.5	118.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066359	Tcl1b1	ENSMUST00000222342	ENSMUSP00000152806	TRANSLATION	protein_coding	-	-	2	129	0	0.56	0	102.6	0	-4,-7	-	-	8.946	MINOR
ENSMUSG00000047014	Catsperb	ENSMUST00000221241	ENSMUSP00000152678	TRANSLATION	nonsense_mediated_decay	-	-	1	430	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000047014	Catsperb	ENSMUST00000220820	ENSMUSP00000152610	TRANSLATION	nonsense_mediated_decay	start	-	1	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047014	Catsperb	ENSMUST00000221965	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047014	Catsperb	ENSMUST00000220474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047014	Catsperb	ENSMUST00000055156	ENSMUSP00000052089	TRANSLATION	protein_coding	-	CCDS26112.1	1	1109	0	0	0.5	845.9	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000066637	Ttc32	ENSMUST00000219470	ENSMUSP00000151803	TRANSLATION	protein_coding	-	-	1	119	0	1.12	0	0	0	-4,-2	-	-	3.906	MINOR
ENSMUSG00000066637	Ttc32	ENSMUST00000085741	ENSMUSP00000082891	TRANSLATION	protein_coding	-	CCDS25808.1	1	148	0	1.72	1.5	35.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000066637	Ttc32	ENSMUST00000219488	ENSMUSP00000152004	TRANSLATION	protein_coding	-	-	3	138	0	1.32	0.5	0	0	-4,-2	-	-	4.602	MINOR
ENSMUSG00000036136	Fam110c	ENSMUST00000041133	ENSMUSP00000041563	TRANSLATION	protein_coding	-	CCDS25860.1	1	421	0	0	0.5	119.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040856	Dlk1	ENSMUST00000056110	ENSMUSP00000063104	TRANSLATION	protein_coding	-	CCDS26168.1	1	385	19	4.77	3.9	123	6	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000040856	Dlk1	ENSMUST00000109846	ENSMUSP00000105472	TRANSLATION	protein_coding	-	CCDS49174.1	1	334	19	4.35	1.5	97.8	6	3,-2	-	-	15.82	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000173812	ENSMUSP00000134308	TRANSLATION	protein_coding	start	-	3	122	3	0.5	0	0	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000174539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040856	Dlk1	ENSMUST00000124293	ENSMUSP00000133530	TRANSLATION	protein_coding	stop	-	1	185	16	3.25	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000173539	ENSMUSP00000133430	TRANSLATION	protein_coding	-	-	5	310	19	4.35	1.7	97.8	6	3,-2	-	-	15.889	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000109842	ENSMUSP00000105468	TRANSLATION	protein_coding	-	CCDS56863.1	1	312	19	4.35	1.7	97.8	6	3,-2	-	-	15.889	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000109843	ENSMUSP00000105469	TRANSLATION	protein_coding	-	CCDS49173.1	1	290	16	3.85	0.5	97.8	6	3,-2	-	-	12.648	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000109841	ENSMUSP00000105467	TRANSLATION	protein_coding	-	-	5	292	16	3.85	0.5	97.8	6	3,-2	-	-	12.648	MINOR
ENSMUSG00000040856	Dlk1	ENSMUST00000109844	ENSMUSP00000105470	TRANSLATION	protein_coding	-	CCDS26168.1	1	385	19	4.77	3.9	123	6	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000037361	Sf3b6	ENSMUST00000218705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037361	Sf3b6	ENSMUST00000046207	ENSMUSP00000043662	TRANSLATION	protein_coding	-	CCDS25791.1	1	125	0	3.08	20.2	57.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000037361	Sf3b6	ENSMUST00000219359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037361	Sf3b6	ENSMUST00000218650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037361	Sf3b6	ENSMUST00000219128	ENSMUSP00000151723	TRANSLATION	protein_coding	start/stop	-	3	111	0	2.45	0	57.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052609	Plekhg3	ENSMUST00000219426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052609	Plekhg3	ENSMUST00000075249	ENSMUSP00000074729	TRANSLATION	protein_coding	-	CCDS25994.1	1	1341	0	6.374	0.5	184	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000052609	Plekhg3	ENSMUST00000219751	ENSMUSP00000151704	TRANSLATION	protein_coding	stop	-	3	143	0	1.59	0	37.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052609	Plekhg3	ENSMUST00000218357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052609	Plekhg3	ENSMUST00000219063	ENSMUSP00000151851	TRANSLATION	protein_coding	-	-	5	1340	0	6.374	0.5	184	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052609	Plekhg3	ENSMUST00000218461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052609	Plekhg3	ENSMUST00000217730	ENSMUSP00000151564	TRANSLATION	protein_coding	stop	-	2	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052609	Plekhg3	ENSMUST00000218427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052609	Plekhg3	ENSMUST00000218380	ENSMUSP00000151867	TRANSLATION	protein_coding	stop	-	3	91	0	0.24	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000094546	Ighv1-26	ENSMUST00000103510	ENSMUSP00000100291	TRANSLATION	IG_V_gene	stop	-	-	117	5	1.5	0	55.7	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000096355	Ighv8-4	ENSMUST00000192298	ENSMUSP00000141366	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.3	0	51.2	0	2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000096355	Ighv8-4	ENSMUST00000178949	ENSMUSP00000136226	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	51.2	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037486	Asxl2	ENSMUST00000111215	ENSMUSP00000106846	TRANSLATION	protein_coding	-	-	5	1370	8	0	0.5	209.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000037486	Asxl2	ENSMUST00000144247	ENSMUSP00000116048	TRANSLATION	protein_coding	stop	-	5	403	0	0	0	124.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037486	Asxl2	ENSMUST00000152196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037486	Asxl2	ENSMUST00000140046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037486	Asxl2	ENSMUST00000092003	ENSMUSP00000089629	TRANSLATION	protein_coding	-	-	5	597	0	0	0	123.1	0	-4,-6	-	-	0.84	MINOR
ENSMUSG00000037486	Asxl2	ENSMUST00000138740	ENSMUSP00000133639	TRANSLATION	nonsense_mediated_decay	start	-	5	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037486	Asxl2	ENSMUST00000219208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037486	Asxl2	ENSMUST00000153102	ENSMUSP00000117384	TRANSLATION	protein_coding	-	CCDS36395.2	5	1370	8	0	0.5	209.1	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000034290	Nek9	ENSMUST00000040992	ENSMUSP00000049056	TRANSLATION	protein_coding	-	CCDS26057.1	1	984	17	10.41	0.5	347.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095799	Gm8332	ENSMUST00000179468	ENSMUSP00000136709	TRANSLATION	protein_coding	-	-	-	144	0	1	3	68.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020641	Rsad2	ENSMUST00000137792	ENSMUSP00000121791	TRANSLATION	nonsense_mediated_decay	-	-	1	187	12	0.68	0	39.2	1	1,-2	-	-	-1	MINOR
ENSMUSG00000020641	Rsad2	ENSMUST00000142732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020641	Rsad2	ENSMUST00000020970	ENSMUSP00000020970	TRANSLATION	protein_coding	-	CCDS25848.1	1	362	12	1.932	1.5	59	1	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000020650	Bcap29	ENSMUST00000218942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020650	Bcap29	ENSMUST00000177962	ENSMUSP00000137260	TRANSLATION	protein_coding	-	CCDS25864.1	1	240	0	2	3.9	224.5	3	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020650	Bcap29	ENSMUST00000020979	ENSMUSP00000020979	TRANSLATION	protein_coding	-	CCDS25864.1	1	240	0	2	3.9	224.5	3	-2,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020650	Bcap29	ENSMUST00000218543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000066361	Serpina3c	ENSMUST00000085050	ENSMUSP00000082125	TRANSLATION	protein_coding	-	CCDS26148.1	1	417	0	4	0.5	393.6	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000044548	Dact1	ENSMUST00000061273	ENSMUSP00000058943	TRANSLATION	protein_coding	-	CCDS25963.1	1	778	0	0	1.5	512.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044548	Dact1	ENSMUST00000150639	ENSMUSP00000117169	TRANSLATION	protein_coding	-	CCDS49083.1	3	815	0	0	1.5	789.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042350	Arel1	ENSMUST00000165093	ENSMUSP00000129147	TRANSLATION	protein_coding	stop	-	3	71	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042350	Arel1	ENSMUST00000168713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042350	Arel1	ENSMUST00000163372	ENSMUSP00000130259	TRANSLATION	nonsense_mediated_decay	-	-	3	99	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042350	Arel1	ENSMUST00000165886	ENSMUSP00000126508	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042350	Arel1	ENSMUST00000167448	ENSMUSP00000127426	TRANSLATION	protein_coding	stop	-	3	64	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042350	Arel1	ENSMUST00000169161	ENSMUSP00000126523	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	37.3	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042350	Arel1	ENSMUST00000043169	ENSMUSP00000048780	TRANSLATION	protein_coding	-	CCDS26051.1	1	823	5	6.76	9.6	302.6	1	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000042350	Arel1	ENSMUST00000163231	ENSMUSP00000129213	TRANSLATION	nonsense_mediated_decay	-	-	1	502	1	1.2	0	37.3	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000222606	ENSMUSP00000152160	TRANSLATION	nonsense_mediated_decay	-	-	1	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000223355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042472	Zfp410	ENSMUST00000222450	ENSMUSP00000152225	TRANSLATION	protein_coding	start	-	3	71	6	1.515	0	15.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000220832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042472	Zfp410	ENSMUST00000222875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042472	Zfp410	ENSMUST00000220931	ENSMUSP00000152098	TRANSLATION	protein_coding	-	-	1	345	16	3.298	0.5	61	0	-4,-5	-	-	12.216	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000222506	ENSMUSP00000152295	TRANSLATION	nonsense_mediated_decay	start	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000222773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042472	Zfp410	ENSMUST00000222431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042472	Zfp410	ENSMUST00000045931	ENSMUSP00000045550	TRANSLATION	protein_coding	-	CCDS26042.1	1	478	20	4.1	7.5	81.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000042472	Zfp410	ENSMUST00000221867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042472	Zfp410	ENSMUST00000222832	ENSMUSP00000152817	TRANSLATION	protein_coding	-	-	2	278	12	2.55	0	45.1	0	-4,-5	-	-	6.876	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000223130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042472	Zfp410	ENSMUST00000220955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042472	Zfp410	ENSMUST00000222471	ENSMUSP00000152157	TRANSLATION	protein_coding	start	-	3	154	4	1	0	20.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000221490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042472	Zfp410	ENSMUST00000222258	ENSMUSP00000152441	TRANSLATION	protein_coding	-	-	1	347	16	3.24	0.5	61	0	-4,-5	-	-	12.096	MINOR
ENSMUSG00000042472	Zfp410	ENSMUST00000221656	ENSMUSP00000152814	TRANSLATION	nonsense_mediated_decay	-	-	2	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094164	Ighv2-3	ENSMUST00000178229	ENSMUSP00000136577	TRANSLATION	IG_V_gene	stop	-	-	115	3	1	0	51.2	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021178	Psmc1	ENSMUST00000223078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021178	Psmc1	ENSMUST00000222374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021178	Psmc1	ENSMUST00000021595	ENSMUSP00000021595	TRANSLATION	protein_coding	-	CCDS36522.1	1	440	13	9.5	21.5	146	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021178	Psmc1	ENSMUST00000221308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007682	Dio2	ENSMUST00000082432	ENSMUSP00000081013	TRANSLATION	protein_coding	-	CCDS36514.1	1	266	0	0.48	3.9	388.4	0	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000047454	Gphn	ENSMUST00000110388	ENSMUSP00000106018	TRANSLATION	protein_coding	-	CCDS49095.1	1	772	0	17.05	9.8	453.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047454	Gphn	ENSMUST00000219629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047454	Gphn	ENSMUST00000052472	ENSMUSP00000054064	TRANSLATION	protein_coding	-	CCDS26000.1	1	769	0	17.05	4.9	453.1	0	-4,-5	-	-	13.329	MINOR
ENSMUSG00000021222	Dcaf4	ENSMUST00000221769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021222	Dcaf4	ENSMUST00000222502	ENSMUSP00000152108	TRANSLATION	protein_coding	stop	-	2	84	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021222	Dcaf4	ENSMUST00000222833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021222	Dcaf4	ENSMUST00000221944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021222	Dcaf4	ENSMUST00000223291	ENSMUSP00000152717	TRANSLATION	protein_coding	-	-	1	532	0	1.7	0.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000021222	Dcaf4	ENSMUST00000021645	ENSMUSP00000021645	TRANSLATION	protein_coding	-	CCDS26027.1	5	519	0	1.7	1.5	0	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000021222	Dcaf4	ENSMUST00000222607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021222	Dcaf4	ENSMUST00000222725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021143	Pacs2	ENSMUST00000220715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021143	Pacs2	ENSMUST00000221475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021143	Pacs2	ENSMUST00000221382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021143	Pacs2	ENSMUST00000084891	ENSMUSP00000081953	TRANSLATION	protein_coding	-	CCDS36573.1	5	892	0	0	6.3	679.6	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000021143	Pacs2	ENSMUST00000222406	ENSMUSP00000152250	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021143	Pacs2	ENSMUST00000220541	ENSMUSP00000152145	TRANSLATION	protein_coding	-	-	1	862	0	0	0.5	679.6	0	-4,-5	-	-	6	MINOR
ENSMUSG00000021143	Pacs2	ENSMUST00000223502	ENSMUSP00000152439	TRANSLATION	protein_coding	-	-	1	894	0	0	1.5	679.6	0	-4,-6	-	-	6.188	MINOR
ENSMUSG00000021044	Adck1	ENSMUST00000222695	ENSMUSP00000152821	TRANSLATION	protein_coding	-	CCDS26087.1	1	525	0	2.88	6.5	134.9	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000021044	Adck1	ENSMUST00000166940	ENSMUSP00000127254	TRANSLATION	protein_coding	-	CCDS26087.1	1	525	0	2.88	6.5	134.9	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000021044	Adck1	ENSMUST00000223538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021044	Adck1	ENSMUST00000101165	ENSMUSP00000098724	TRANSLATION	protein_coding	-	CCDS26087.1	1	525	0	2.88	6.5	134.9	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000021044	Adck1	ENSMUST00000221630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041567	Serpina12	ENSMUST00000043915	ENSMUSP00000045572	TRANSLATION	protein_coding	-	CCDS26145.1	1	413	0	4	0.5	374.2	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000033854	Kcnk10	ENSMUST00000221906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033854	Kcnk10	ENSMUST00000221240	ENSMUSP00000152473	TRANSLATION	protein_coding	-	CCDS36518.1	1	535	0	5	4	135.5	6	0,-3	-	-	13	PRINCIPAL:2
ENSMUSG00000033854	Kcnk10	ENSMUST00000221305	ENSMUSP00000152656	TRANSLATION	protein_coding	-	-	1	241	0	3	0.5	67.5	4	-4,-5	-	-	3.918	MINOR
ENSMUSG00000033854	Kcnk10	ENSMUST00000110113	ENSMUSP00000105740	TRANSLATION	protein_coding	-	-	1	521	0	5	2.8	135.5	6	-4,-7	-	-	12.6	ALTERNATIVE:2
ENSMUSG00000094561	Ighv1-22	ENSMUST00000103507	ENSMUSP00000100288	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	58.7	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000041359	Tcl1	ENSMUST00000101071	ENSMUSP00000098632	TRANSLATION	protein_coding	-	CCDS70418.1	1	193	0	2.5	0.5	121.9	0	-4,-2	-	-	9.636	MINOR
ENSMUSG00000041359	Tcl1	ENSMUST00000177521	ENSMUSP00000134903	TRANSLATION	nonsense_mediated_decay	-	-	3	107	0	2.5	0	124.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041359	Tcl1	ENSMUST00000176952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041359	Tcl1	ENSMUST00000041316	ENSMUSP00000036066	TRANSLATION	protein_coding	-	CCDS36549.1	1	116	0	3.16	1.5	139.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041359	Tcl1	ENSMUST00000176579	ENSMUSP00000135069	TRANSLATION	protein_coding	-	CCDS83999.1	2	91	0	2	0.5	90.6	0	-4,-2	-	-	6.756	MINOR
ENSMUSG00000041359	Tcl1	ENSMUST00000175652	ENSMUSP00000134811	TRANSLATION	protein_coding	-	-	2	59	0	1.66	0	49.3	0	-4,-2	-	-	3.6	MINOR
ENSMUSG00000079014	Serpina3i	ENSMUST00000109960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079014	Serpina3i	ENSMUST00000109958	ENSMUSP00000105584	TRANSLATION	protein_coding	-	CCDS49157.1	5	408	0	4	1.5	392.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000076665	Ighv7-1	ENSMUST00000103474	ENSMUSP00000100255	TRANSLATION	IG_V_gene	stop	-	-	121	6	1.5	0	49.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000066441	Rdh11	ENSMUST00000085254	ENSMUSP00000082352	TRANSLATION	protein_coding	-	-	1	300	27	4.74	0	118.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000066441	Rdh11	ENSMUST00000159500	ENSMUSP00000123829	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000066441	Rdh11	ENSMUST00000161204	ENSMUSP00000124066	TRANSLATION	protein_coding	-	CCDS36480.1	1	316	27	4.74	1.5	118.7	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000095210	Ighv5-9-1	ENSMUST00000192264	ENSMUSP00000141243	TRANSLATION	IG_V_gene	stop	-	-	126	3	1.5	0	52.1	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000095210	Ighv5-9-1	ENSMUST00000103452	ENSMUSP00000100233	TRANSLATION	IG_V_gene	stop	-	-	116	3	1.5	0	52.1	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000043945	Adam6a	ENSMUST00000053086	ENSMUSP00000059315	TRANSLATION	protein_coding	-	CCDS26208.1	-	754	10	0.16	0.5	265.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033454	Zbtb1	ENSMUST00000042779	ENSMUSP00000041955	TRANSLATION	protein_coding	-	CCDS25992.1	1	713	22	0	8.8	69.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000093838	Ighv3-1	ENSMUST00000103478	ENSMUSP00000100259	TRANSLATION	IG_V_gene	stop	-	-	116	9	1.3	0	51.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000020949	Fkbp3	ENSMUST00000221710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020949	Fkbp3	ENSMUST00000221166	ENSMUSP00000152766	TRANSLATION	nonsense_mediated_decay	-	-	5	76	0	2.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020949	Fkbp3	ENSMUST00000221608	ENSMUSP00000152312	TRANSLATION	protein_coding	start	-	3	88	3	2.844	0	84.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020949	Fkbp3	ENSMUST00000021332	ENSMUSP00000021332	TRANSLATION	protein_coding	-	CCDS25940.1	1	224	3	7.07	12.8	107	0	-4,-6	-	-	18.964	PRINCIPAL:1
ENSMUSG00000020949	Fkbp3	ENSMUST00000220957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020949	Fkbp3	ENSMUST00000220983	ENSMUSP00000152733	TRANSLATION	protein_coding	start	-	5	149	1	4.41	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020949	Fkbp3	ENSMUST00000222684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020949	Fkbp3	ENSMUST00000223167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020949	Fkbp3	ENSMUST00000221913	ENSMUSP00000152380	TRANSLATION	nonsense_mediated_decay	start	-	3	82	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000020949	Fkbp3	ENSMUST00000222467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020949	Fkbp3	ENSMUST00000220730	ENSMUSP00000152500	TRANSLATION	protein_coding	-	-	5	188	3	6.07	0	107.6	0	-4,-6	-	-	13.002	MINOR
ENSMUSG00000020949	Fkbp3	ENSMUST00000221706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021271	Zfp839	ENSMUST00000170060	ENSMUSP00000131841	TRANSLATION	protein_coding	-	CCDS49177.1	1	921	3	0	0.5	1073.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021271	Zfp839	ENSMUST00000222460	ENSMUSP00000152386	TRANSLATION	protein_coding	stop	-	1	791	3	0	0	558.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021271	Zfp839	ENSMUST00000221549	ENSMUSP00000152270	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	76.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035933	Cog5	ENSMUST00000219837	ENSMUSP00000151902	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035933	Cog5	ENSMUST00000219672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035933	Cog5	ENSMUST00000218428	ENSMUSP00000151730	TRANSLATION	protein_coding	start	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035933	Cog5	ENSMUST00000036862	ENSMUSP00000044797	TRANSLATION	protein_coding	-	CCDS49046.1	1	829	0	0	1.5	116.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000020964	Sel1l	ENSMUST00000165282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020964	Sel1l	ENSMUST00000167594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020964	Sel1l	ENSMUST00000167466	ENSMUSP00000129384	TRANSLATION	protein_coding	-	CCDS49137.1	1	740	0	8.034	0.5	179.1	0	3,-2	-	-	6.216	MINOR
ENSMUSG00000020964	Sel1l	ENSMUST00000021347	ENSMUSP00000021347	TRANSLATION	protein_coding	-	CCDS26091.1	1	790	5	9.034	0.5	242.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000020964	Sel1l	ENSMUST00000169843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020964	Sel1l	ENSMUST00000172246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020964	Sel1l	ENSMUST00000178462	ENSMUSP00000136087	TRANSLATION	protein_coding	-	-	5	740	0	7.77	0.5	179.1	0	3,-2	-	-	5.688	MINOR
ENSMUSG00000020964	Sel1l	ENSMUST00000171959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020964	Sel1l	ENSMUST00000171465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020964	Sel1l	ENSMUST00000166691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076615	Ighg3	ENSMUST00000103423	ENSMUSP00000100219	TRANSLATION	IG_C_gene	start	-	-	330	5	3.4	0	212.7	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076615	Ighg3	ENSMUST00000223179	ENSMUSP00000152559	TRANSLATION	IG_C_gene	start	-	-	399	5	4.4	0	212.7	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000047022	Mipol1	ENSMUST00000148418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047022	Mipol1	ENSMUST00000153755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047022	Mipol1	ENSMUST00000136006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047022	Mipol1	ENSMUST00000145003	ENSMUSP00000121617	TRANSLATION	protein_coding	-	CCDS49070.1	1	379	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000047022	Mipol1	ENSMUST00000153137	ENSMUSP00000117005	TRANSLATION	protein_coding	-	-	5	419	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000047022	Mipol1	ENSMUST00000150292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047022	Mipol1	ENSMUST00000128945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047022	Mipol1	ENSMUST00000130447	ENSMUSP00000119918	TRANSLATION	protein_coding	-	-	5	400	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000047022	Mipol1	ENSMUST00000153439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047022	Mipol1	ENSMUST00000123498	ENSMUSP00000119636	TRANSLATION	protein_coding	-	-	5	400	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000021010	Npas3	ENSMUST00000220986	ENSMUSP00000152696	TRANSLATION	protein_coding	stop	-	1	64	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021010	Npas3	ENSMUST00000223358	ENSMUSP00000152411	TRANSLATION	protein_coding	-	-	1	923	0	9.75	0.5	107.5	0	-4,-6	-	-	11.58	ALTERNATIVE:2
ENSMUSG00000021010	Npas3	ENSMUST00000101432	ENSMUSP00000098975	TRANSLATION	protein_coding	-	CCDS25907.1	1	925	0	9.75	0.5	107.5	0	-4,-7	-	-	11.58	PRINCIPAL:2
ENSMUSG00000021010	Npas3	ENSMUST00000223057	ENSMUSP00000152452	TRANSLATION	protein_coding	-	-	5	907	0	9.96	0	107.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021243	Fcf1	ENSMUST00000171040	ENSMUSP00000131190	TRANSLATION	protein_coding	-	-	3	186	3	4.55	6.9	135.4	0	-4,-5	-	-	16.276	MINOR
ENSMUSG00000021243	Fcf1	ENSMUST00000172241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021243	Fcf1	ENSMUST00000021669	ENSMUSP00000021669	TRANSLATION	protein_coding	-	CCDS49113.1	1	198	3	4.55	19.5	135.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000096499	Ighv1-5	ENSMUST00000103494	ENSMUSP00000100275	TRANSLATION	IG_V_gene	start/stop	-	-	98	5	1	0	58.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096499	Ighv1-5	ENSMUST00000191803	ENSMUSP00000141537	TRANSLATION	IG_V_gene	stop	-	-	117	5	1.4	0	58.1	0	-2,-4	-	-	-1	PRINCIPAL:5
ENSMUSG00000046768	Rhoj	ENSMUST00000055390	ENSMUSP00000059498	TRANSLATION	protein_coding	-	CCDS25981.1	1	214	19	4.74	7.5	164.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000046768	Rhoj	ENSMUST00000146096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046768	Rhoj	ENSMUST00000118602	ENSMUSP00000112379	TRANSLATION	protein_coding	-	-	1	171	16	3.74	0	140.5	0	-4,-5	-	-	12.588	MINOR
ENSMUSG00000046768	Rhoj	ENSMUST00000172981	ENSMUSP00000134552	TRANSLATION	nonsense_mediated_decay	start	-	2	96	9	1	0	42.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046768	Rhoj	ENSMUST00000118966	ENSMUSP00000113165	TRANSLATION	protein_coding	-	-	1	167	16	3.74	0	139.8	0	-4,-5	-	-	12.546	MINOR
ENSMUSG00000002900	Lamb1	ENSMUST00000169088	ENSMUSP00000132778	TRANSLATION	protein_coding	-	-	5	1786	0	20.946	7.6	717.9	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000002900	Lamb1	ENSMUST00000002979	ENSMUSP00000002979	TRANSLATION	protein_coding	-	-	1	1786	0	20.946	7.6	717.9	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000002900	Lamb1	ENSMUST00000172134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002900	Lamb1	ENSMUST00000170495	ENSMUSP00000132001	TRANSLATION	protein_coding	stop	-	3	39	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000002900	Lamb1	ENSMUST00000164009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002900	Lamb1	ENSMUST00000164228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002900	Lamb1	ENSMUST00000239496	ENSMUSP00000159366	TRANSLATION	protein_coding	-	CCDS25862.1	-	1834	0	20.946	1.5	717.9	0	-4,-7	-	-	12.228	MINOR
ENSMUSG00000002900	Lamb1	ENSMUST00000169065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051235	Gen1	ENSMUST00000218259	ENSMUSP00000151740	TRANSLATION	nonsense_mediated_decay	-	-	3	61	1	1	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051235	Gen1	ENSMUST00000219537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051235	Gen1	ENSMUST00000219600	ENSMUSP00000151650	TRANSLATION	protein_coding	stop	-	3	114	2	2.99	0	58.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051235	Gen1	ENSMUST00000218262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051235	Gen1	ENSMUST00000218547	ENSMUSP00000151898	TRANSLATION	nonsense_mediated_decay	-	-	1	358	6	8.46	0	90.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051235	Gen1	ENSMUST00000166117	ENSMUSP00000132098	TRANSLATION	protein_coding	-	CCDS36403.1	1	908	7	12.04	0.5	148.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051235	Gen1	ENSMUST00000218487	ENSMUSP00000151310	TRANSLATION	protein_coding	stop	-	1	739	6	10.71	0	90.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051235	Gen1	ENSMUST00000220261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011171	Vipr2	ENSMUST00000177199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011171	Vipr2	ENSMUST00000176078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011171	Vipr2	ENSMUST00000011315	ENSMUSP00000011315	TRANSLATION	protein_coding	-	CCDS26210.1	1	437	0	8.49	1.5	355.1	8	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000011171	Vipr2	ENSMUST00000176433	ENSMUSP00000135149	TRANSLATION	protein_coding	start	-	5	123	0	2.426	0	111.8	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000011171	Vipr2	ENSMUST00000175785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011171	Vipr2	ENSMUST00000100988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035105	Egln3	ENSMUST00000039516	ENSMUSP00000041874	TRANSLATION	protein_coding	-	CCDS25908.1	1	239	3	3.75	10.5	70.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000041716	Gm20604	ENSMUST00000174651	ENSMUSP00000133604	TRANSLATION	protein_coding,RT	-	CCDS49147.1	2	75	0	0	1.5	83.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000044067	Gpr22	ENSMUST00000057783	ENSMUSP00000056125	TRANSLATION	protein_coding	-	-	1	432	0	0.8	13.3	80.5	7	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000044067	Gpr22	ENSMUST00000236002	ENSMUSP00000158030	TRANSLATION	protein_coding	-	CCDS25866.2	-	469	0	0.8	1.5	80.5	7	-4,-5	-	-	12.164	MINOR
ENSMUSG00000044067	Gpr22	ENSMUST00000174480	ENSMUSP00000134674	TRANSLATION	protein_coding	stop	-	5	187	0	0.6	0	35.4	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000044067	Gpr22	ENSMUST00000176710	ENSMUSP00000134839	TRANSLATION	protein_coding	-	-	5	432	0	0.8	13.3	80.5	7	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000034501	Pcnx4	ENSMUST00000044352	ENSMUSP00000038916	TRANSLATION	protein_coding	-	CCDS36473.1	1	1177	0	0	0.5	90.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096326	Ighv1-78	ENSMUST00000163670	ENSMUSP00000128082	TRANSLATION	IG_V_gene	start/stop	-	-	98	8	1	0	60.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096326	Ighv1-78	ENSMUST00000199373	ENSMUSP00000143632	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	60.2	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000035451	Foxa1	ENSMUST00000044380	ENSMUSP00000041118	TRANSLATION	protein_coding	-	CCDS25926.1	1	468	0	1.75	4.1	325.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000035451	Foxa1	ENSMUST00000218398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021235	Coq6	ENSMUST00000110276	ENSMUSP00000105905	TRANSLATION	protein_coding	-	CCDS26044.1	5	476	34	6.95	1.5	0	0	0,1	-	-	12	PRINCIPAL:2
ENSMUSG00000021235	Coq6	ENSMUST00000145522	ENSMUSP00000117609	TRANSLATION	protein_coding	start	-	2	200	19	2.26	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000021235	Coq6	ENSMUST00000110278	ENSMUSP00000105907	TRANSLATION	protein_coding	-	-	5	432	34	6.8094	0	0	0	0,1	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000021235	Coq6	ENSMUST00000021661	ENSMUSP00000021661	TRANSLATION	protein_coding	-	CCDS26044.1	1	476	34	6.95	1.5	0	0	0,1	-	-	12	PRINCIPAL:2
ENSMUSG00000021235	Coq6	ENSMUST00000126913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021235	Coq6	ENSMUST00000124257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021235	Coq6	ENSMUST00000152913	ENSMUSP00000115676	TRANSLATION	nonsense_mediated_decay	-	-	1	282	24	3.99	0	0	0	0,1	-	-	-1	MINOR
ENSMUSG00000021235	Coq6	ENSMUST00000140961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021235	Coq6	ENSMUST00000153450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021235	Coq6	ENSMUST00000156592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021235	Coq6	ENSMUST00000150391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094940	Ighv1-84	ENSMUST00000103551	ENSMUSP00000100332	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	58.5	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000059436	Max	ENSMUST00000217914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059436	Max	ENSMUST00000218597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059436	Max	ENSMUST00000218653	ENSMUSP00000151467	TRANSLATION	nonsense_mediated_decay	start	-	1	14	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059436	Max	ENSMUST00000219538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059436	Max	ENSMUST00000110395	ENSMUSP00000106025	TRANSLATION	protein_coding	-	CCDS36479.1	1	160	0	3.228	10.8	65.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000059436	Max	ENSMUST00000082136	ENSMUSP00000080778	TRANSLATION	protein_coding	-	CCDS49094.1	1	151	0	3.03	10.8	65.3	0	-4,-5	-	-	14.604	ALTERNATIVE:1
ENSMUSG00000059436	Max	ENSMUST00000218640	ENSMUSP00000151710	TRANSLATION	protein_coding	-	-	1	124	0	2.228	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000094505	Ighv8-6	ENSMUST00000103524	ENSMUSP00000100305	TRANSLATION	IG_V_gene	start/stop	-	-	100	3	1	0	46.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094505	Ighv8-6	ENSMUST00000193145	ENSMUSP00000141906	TRANSLATION	IG_V_gene	stop	-	-	118	3	1.2	0	46.7	0	2,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000021112	Mpp5	ENSMUST00000219180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021112	Mpp5	ENSMUST00000219667	ENSMUSP00000151872	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021112	Mpp5	ENSMUST00000219197	ENSMUSP00000151349	TRANSLATION	nonsense_mediated_decay	-	-	1	285	0	2.75	0	115.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021112	Mpp5	ENSMUST00000218726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021112	Mpp5	ENSMUST00000082024	ENSMUSP00000080683	TRANSLATION	protein_coding	-	CCDS26001.1	1	675	14	10.1	12.8	381.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000020590	Snx13	ENSMUST00000048519	ENSMUSP00000038430	TRANSLATION	protein_coding	-	CCDS56837.1	1	958	0	3.32	11.4	398.5	2	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020590	Snx13	ENSMUST00000163677	ENSMUSP00000130182	TRANSLATION	protein_coding	-	-	1	778	0	3.32	0	301.9	2	-2,-5	-	-	6.204	MINOR
ENSMUSG00000020590	Snx13	ENSMUST00000221870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020590	Snx13	ENSMUST00000222101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020590	Snx13	ENSMUST00000221831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020590	Snx13	ENSMUST00000221272	ENSMUSP00000152167	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000020590	Snx13	ENSMUST00000221876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020963	Tshr	ENSMUST00000186437	ENSMUSP00000139632	TRANSLATION	protein_coding	start	-	3	127	0	0.42	0	24.2	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000020963	Tshr	ENSMUST00000221216	ENSMUSP00000152158	TRANSLATION	protein_coding	-	-	5	207	0	4.93	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000020963	Tshr	ENSMUST00000021343	ENSMUSP00000021343	TRANSLATION	protein_coding	-	CCDS49135.1	1	245	0	6.25	0.5	29	0	3,-2	-	-	2.676	MINOR
ENSMUSG00000020963	Tshr	ENSMUST00000222686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020963	Tshr	ENSMUST00000021346	ENSMUSP00000021346	TRANSLATION	protein_coding	-	CCDS26088.1	1	764	0	7.95	3.9	127.7	8	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000020657	Dnajc27	ENSMUST00000020986	ENSMUSP00000020986	TRANSLATION	protein_coding	-	CCDS25786.1	1	273	19	5.25	15.3	188.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000020657	Dnajc27	ENSMUST00000219923	ENSMUSP00000151848	TRANSLATION	nonsense_mediated_decay	-	-	2	273	19	5.25	15.3	188.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020657	Dnajc27	ENSMUST00000049584	ENSMUSP00000106803	TRANSLATION	protein_coding	-	CCDS25786.1	2	273	19	5.25	15.3	188.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000020657	Dnajc27	ENSMUST00000220273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047414	Flrt2	ENSMUST00000057324	ENSMUSP00000062171	TRANSLATION	protein_coding	-	CCDS26094.1	1	660	2	1	11.5	159	2	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000047414	Flrt2	ENSMUST00000110117	ENSMUSP00000105744	TRANSLATION	protein_coding	-	CCDS26094.1	1	660	2	1	11.5	159	2	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000063232	Serpina11	ENSMUST00000074693	ENSMUSP00000074258	TRANSLATION	protein_coding	-	CCDS26143.2	1	427	0	4.9	5.1	340.1	0	4,-1	-	-	14	PRINCIPAL:3
ENSMUSG00000063232	Serpina11	ENSMUST00000151709	ENSMUSP00000115400	TRANSLATION	protein_coding	stop	-	5	236	0	1.13	0	157.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000063232	Serpina11	ENSMUST00000139777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063232	Serpina11	ENSMUST00000176246	ENSMUSP00000135138	TRANSLATION	protein_coding	stop	-	5	258	0	1.9	0	181.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000063232	Serpina11	ENSMUST00000120251	ENSMUSP00000112420	TRANSLATION	protein_coding	-	CCDS56860.1	1	425	0	4.9	5.1	340.1	0	4,-1	-	-	14	ALTERNATIVE:1
ENSMUSG00000020668	Kif3c	ENSMUST00000020999	ENSMUSP00000020999	TRANSLATION	protein_coding	-	CCDS25783.1	1	796	11	1	1.5	376.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020668	Kif3c	ENSMUST00000220210	ENSMUSP00000151286	TRANSLATION	protein_coding	-	CCDS25783.1	1	796	11	1	1.5	376.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000020668	Kif3c	ENSMUST00000218952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020668	Kif3c	ENSMUST00000217891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020668	Kif3c	ENSMUST00000219895	ENSMUSP00000151953	TRANSLATION	protein_coding	-	-	1	278	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021886	Gpr65	ENSMUST00000075072	ENSMUSP00000074581	TRANSLATION	protein_coding	-	CCDS26096.1	1	337	0	0.42	1.5	139.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000076630	Ighd1-1	ENSMUST00000103439	ENSMUSP00000141687	TRANSLATION	IG_D_gene	start/stop	-	-	7	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021025	Nfkbia	ENSMUST00000219869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021025	Nfkbia	ENSMUST00000021413	ENSMUSP00000021413	TRANSLATION	protein_coding	-	CCDS25918.1	1	314	0	3.95	7.5	74.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041323	Ak7	ENSMUST00000040876	ENSMUSP00000043145	TRANSLATION	protein_coding	-	CCDS49162.1	1	723	9	3.2	2.7	103.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041323	Ak7	ENSMUST00000221981	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041323	Ak7	ENSMUST00000220702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094910	D430019H16Rik	ENSMUST00000178224	ENSMUSP00000137376	TRANSLATION	protein_coding	-	CCDS56861.1	1	83	0	0	5.3	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000021290	Atp5mpl	ENSMUST00000222405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021290	Atp5mpl	ENSMUST00000223435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021290	Atp5mpl	ENSMUST00000021719	ENSMUSP00000021719	TRANSLATION	protein_coding	-	CCDS36566.1	1	58	0	0	7.8	116.3	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000021290	Atp5mpl	ENSMUST00000222874	ENSMUSP00000152618	TRANSLATION	protein_coding	-	CCDS36566.1	2	58	0	0	7.8	116.3	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000021290	Atp5mpl	ENSMUST00000223191	ENSMUSP00000152566	TRANSLATION	protein_coding	stop	-	2	57	0	0	7.8	112.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000020562	Efcab10	ENSMUST00000020878	ENSMUSP00000020878	TRANSLATION	protein_coding	-	CCDS49048.1	1	132	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000034258	Flvcr2	ENSMUST00000040461	ENSMUSP00000035569	TRANSLATION	protein_coding	-	CCDS26062.1	1	551	0	0	0.5	101.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034258	Flvcr2	ENSMUST00000221585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020660	Pomc	ENSMUST00000220006	ENSMUSP00000151450	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	24.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000020660	Pomc	ENSMUST00000020990	ENSMUSP00000020990	TRANSLATION	protein_coding	-	CCDS25785.1	1	235	0	0	1.5	231	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020660	Pomc	ENSMUST00000218169	ENSMUSP00000151769	TRANSLATION	protein_coding	stop	-	2	79	0	0	0	83.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000020660	Pomc	ENSMUST00000219543	ENSMUSP00000151504	TRANSLATION	protein_coding	-	CCDS25785.1	1	235	0	0	1.5	231	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020660	Pomc	ENSMUST00000218089	ENSMUSP00000151367	TRANSLATION	protein_coding	-	CCDS25785.1	1	235	0	0	1.5	231	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021040	Slirp	ENSMUST00000077462	ENSMUSP00000076673	TRANSLATION	protein_coding	start	-	5	102	0	1.99	0	29.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021040	Slirp	ENSMUST00000160880	ENSMUSP00000125727	TRANSLATION	protein_coding	start	-	5	79	0	0.894	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021040	Slirp	ENSMUST00000160488	ENSMUSP00000124174	TRANSLATION	protein_coding	-	-	1	99	0	1.894	0	52.1	0	-4,0	-	-	11.04	ALTERNATIVE:2
ENSMUSG00000021040	Slirp	ENSMUST00000161023	ENSMUSP00000125341	TRANSLATION	protein_coding	-	CCDS36503.1	1	112	0	2.254	2.7	52.1	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000084883	Ccdc85c	ENSMUST00000222310	ENSMUSP00000152421	TRANSLATION	protein_coding	-	CCDS49166.1	5	420	0	0	0.5	318.6	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000084883	Ccdc85c	ENSMUST00000136175	ENSMUSP00000125757	TRANSLATION	protein_coding	-	-	5	433	0	0	0.5	318.6	0	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000091402	Rd3l	ENSMUST00000185354	ENSMUSP00000140987	TRANSLATION	protein_coding	-	-	1	100	0	0	0	120.9	0	-4,-2	-	-	3.108	MINOR
ENSMUSG00000091402	Rd3l	ENSMUST00000190536	ENSMUSP00000140410	TRANSLATION	protein_coding	-	CCDS49185.1	1	197	0	0	2.7	169.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091402	Rd3l	ENSMUST00000170525	ENSMUSP00000130014	TRANSLATION	protein_coding	-	CCDS49185.1	2	197	0	0	2.7	169.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091402	Rd3l	ENSMUST00000190680	ENSMUSP00000140569	TRANSLATION	protein_coding	start	-	2	132	0	0	0	83.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091402	Rd3l	ENSMUST00000189759	ENSMUSP00000140454	TRANSLATION	protein_coding	-	CCDS49185.1	1	197	0	0	2.7	169.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021078	Tomm20l	ENSMUST00000021482	ENSMUSP00000021482	TRANSLATION	protein_coding	-	CCDS49080.1	1	152	0	1.6	0.5	109.1	2	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000021078	Tomm20l	ENSMUST00000221962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021078	Tomm20l	ENSMUST00000220834	ENSMUSP00000152608	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	31.5	2	0,-4	-	-	-1	MINOR
ENSMUSG00000040877	Wdr25	ENSMUST00000221377	ENSMUSP00000152858	TRANSLATION	protein_coding	stop	-	3	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040877	Wdr25	ENSMUST00000221510	ENSMUSP00000152632	TRANSLATION	protein_coding	-	-	1	183	0	2.084	0	14	0	-4,-5	-	-	3.318	MINOR
ENSMUSG00000040877	Wdr25	ENSMUST00000220495	ENSMUSP00000152825	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040877	Wdr25	ENSMUST00000220667	ENSMUSP00000152191	TRANSLATION	protein_coding	stop	-	2	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040877	Wdr25	ENSMUST00000047115	ENSMUSP00000035553	TRANSLATION	protein_coding	-	CCDS49172.1	1	535	0	4.22	1.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040877	Wdr25	ENSMUST00000223054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040877	Wdr25	ENSMUST00000167816	ENSMUSP00000129855	TRANSLATION	protein_coding	-	CCDS49172.1	5	535	0	4.22	1.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000020986	Sec23a	ENSMUST00000169976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020986	Sec23a	ENSMUST00000154399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020986	Sec23a	ENSMUST00000134223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020986	Sec23a	ENSMUST00000165134	ENSMUSP00000126011	TRANSLATION	protein_coding	-	-	5	736	4	16	0	575.5	0	-4,-6	-	-	14.074	MINOR
ENSMUSG00000020986	Sec23a	ENSMUST00000021375	ENSMUSP00000021375	TRANSLATION	protein_coding	-	CCDS25931.1	1	765	4	16.75	19.5	582.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043153	Crppa	ENSMUST00000221177	ENSMUSP00000152823	TRANSLATION	protein_coding	-	-	1	348	9	8.1	0.5	0	0	-4,-2	-	-	3	MINOR
ENSMUSG00000043153	Crppa	ENSMUST00000223205	ENSMUSP00000152872	TRANSLATION	protein_coding	-	-	1	397	18	8.6	0.5	0	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000043153	Crppa	ENSMUST00000223068	ENSMUSP00000152318	TRANSLATION	protein_coding	-	-	1	187	9	3.5	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000043153	Crppa	ENSMUST00000221895	ENSMUSP00000152392	TRANSLATION	protein_coding	-	-	1	324	18	5.8	0	0	0	-4,-6	-	-	6	MINOR
ENSMUSG00000043153	Crppa	ENSMUST00000062041	ENSMUSP00000061646	TRANSLATION	protein_coding	-	CCDS49051.1	1	447	18	9.6	1.5	0	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043153	Crppa	ENSMUST00000220519	ENSMUSP00000152423	TRANSLATION	protein_coding	-	-	1	286	18	5	0.5	0	0	-4,-6	-	-	6	MINOR
ENSMUSG00000043153	Crppa	ENSMUST00000221452	ENSMUSP00000152115	TRANSLATION	protein_coding	-	-	1	419	18	8.6	0.5	0	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000021079	Timm9	ENSMUST00000021486	ENSMUSP00000021486	TRANSLATION	protein_coding	-	CCDS25962.1	1	89	0	2.75	19.5	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021079	Timm9	ENSMUST00000221797	ENSMUSP00000152255	TRANSLATION	protein_coding	-	-	1	46	0	1.5	0	30	0	-4,-5	-	-	6.378	MINOR
ENSMUSG00000021079	Timm9	ENSMUST00000221815	ENSMUSP00000152577	TRANSLATION	protein_coding	-	-	1	46	0	1.5	0	30	0	-4,-5	-	-	6.378	MINOR
ENSMUSG00000021079	Timm9	ENSMUST00000220841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021079	Timm9	ENSMUST00000223544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021079	Timm9	ENSMUST00000221892	ENSMUSP00000152204	TRANSLATION	protein_coding	-	-	5	61	0	2	2.5	30.4	0	-4,-5	-	-	7.836	MINOR
ENSMUSG00000021079	Timm9	ENSMUST00000221178	ENSMUSP00000152544	TRANSLATION	protein_coding	-	-	3	46	0	1.5	0	30	0	-4,-5	-	-	6.378	MINOR
ENSMUSG00000021079	Timm9	ENSMUST00000221559	ENSMUSP00000152455	TRANSLATION	protein_coding	-	CCDS25962.1	1	89	0	2.75	19.5	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021079	Timm9	ENSMUST00000220482	ENSMUSP00000152114	TRANSLATION	protein_coding	-	CCDS25962.1	3	89	0	2.75	19.5	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021079	Timm9	ENSMUST00000221367	ENSMUSP00000152574	TRANSLATION	protein_coding	-	CCDS25962.1	5	89	0	2.75	19.5	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021079	Timm9	ENSMUST00000166120	ENSMUSP00000126298	TRANSLATION	protein_coding	-	CCDS25962.1	1	89	0	2.75	19.5	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021185	Dglucy	ENSMUST00000124957	ENSMUSP00000122512	TRANSLATION	protein_coding	start	-	3	72	1	0	0	52.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021185	Dglucy	ENSMUST00000167322	ENSMUSP00000129876	TRANSLATION	protein_coding	-	CCDS26108.1	1	617	5	6.69	1.5	583.6	0	-4,0	-	-	17	PRINCIPAL:2
ENSMUSG00000021185	Dglucy	ENSMUST00000133970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021185	Dglucy	ENSMUST00000069782	ENSMUSP00000067830	TRANSLATION	protein_coding	-	CCDS26108.1	1	617	5	6.69	1.5	583.6	0	-4,0	-	-	17	PRINCIPAL:2
ENSMUSG00000021185	Dglucy	ENSMUST00000154603	ENSMUSP00000119832	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0.4	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021185	Dglucy	ENSMUST00000110070	ENSMUSP00000105697	TRANSLATION	nonsense_mediated_decay	-	-	1	570	4	6.69	0	525.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021185	Dglucy	ENSMUST00000110073	ENSMUSP00000105700	TRANSLATION	protein_coding	-	-	5	647	5	6.69	0.5	583.6	0	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000021185	Dglucy	ENSMUST00000110069	ENSMUSP00000105696	TRANSLATION	protein_coding	-	CCDS26108.1	1	617	5	6.69	1.5	583.6	0	-4,0	-	-	17	PRINCIPAL:2
ENSMUSG00000021185	Dglucy	ENSMUST00000222484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096805	Ighv9-1	ENSMUST00000195884	ENSMUSP00000141346	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	56.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096805	Ighv9-1	ENSMUST00000103471	ENSMUSP00000100252	TRANSLATION	IG_V_gene	start/stop	-	-	98	0	1	0	56.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000020953	Coch	ENSMUST00000220173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020953	Coch	ENSMUST00000218382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020953	Coch	ENSMUST00000085412	ENSMUSP00000082533	TRANSLATION	protein_coding	-	CCDS25901.1	1	552	9	5.26	3.9	331.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000020953	Coch	ENSMUST00000164782	ENSMUSP00000128127	TRANSLATION	protein_coding	-	CCDS25901.1	1	552	9	5.26	3.9	331.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000076653	Ighv7-2	ENSMUST00000193133	ENSMUSP00000141892	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.3	0	51.4	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000076653	Ighv7-2	ENSMUST00000103462	ENSMUSP00000100243	TRANSLATION	IG_V_gene	stop	-	-	118	3	1	0	51.4	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021036	Sptlc2	ENSMUST00000167911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021036	Sptlc2	ENSMUST00000021424	ENSMUSP00000021424	TRANSLATION	protein_coding	-	CCDS26076.1	1	560	11	6.78	7.5	195.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021036	Sptlc2	ENSMUST00000170720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021036	Sptlc2	ENSMUST00000169845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021036	Sptlc2	ENSMUST00000170110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021102	Glrx5	ENSMUST00000223244	ENSMUSP00000152267	TRANSLATION	protein_coding	-	-	5	118	7	1.45	0	35.7	0	-3,1	-	-	12.222	MINOR
ENSMUSG00000021102	Glrx5	ENSMUST00000021522	ENSMUSP00000021522	TRANSLATION	protein_coding	-	CCDS26154.1	1	152	9	2	0.5	66.8	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000021102	Glrx5	ENSMUST00000220494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076710	Ighv1-49	ENSMUST00000103519	ENSMUSP00000100300	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	48.1	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076710	Ighv1-49	ENSMUST00000192724	ENSMUSP00000141739	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	48.1	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076670	Ighv3-5	ENSMUST00000103479	ENSMUSP00000100260	TRANSLATION	IG_V_gene	start/stop	-	-	99	3	1	0	53	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076670	Ighv3-5	ENSMUST00000195619	ENSMUSP00000141480	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.3	0	53	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000021072	Tmx1	ENSMUST00000021471	ENSMUSP00000021471	TRANSLATION	protein_coding	-	CCDS25958.1	1	278	0	3.73	2.7	73.1	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021072	Tmx1	ENSMUST00000160865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021072	Tmx1	ENSMUST00000162277	ENSMUSP00000123893	TRANSLATION	nonsense_mediated_decay	start	-	3	124	0	2.5	0	35	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000034761	Map4k5	ENSMUST00000124715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034761	Map4k5	ENSMUST00000153712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034761	Map4k5	ENSMUST00000153550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034761	Map4k5	ENSMUST00000110567	ENSMUSP00000106196	TRANSLATION	protein_coding	-	-	5	828	18	9.93	0	466.1	0	-4,-5	-	-	17.202	MINOR
ENSMUSG00000034761	Map4k5	ENSMUST00000110570	ENSMUSP00000106199	TRANSLATION	protein_coding	-	-	5	847	18	10.33	7.5	466.1	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000034761	Map4k5	ENSMUST00000147451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034761	Map4k5	ENSMUST00000133688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034761	Map4k5	ENSMUST00000049239	ENSMUSP00000047812	TRANSLATION	protein_coding	-	-	1	847	18	10.33	7.5	465.8	0	-4,-5	-	-	20.982	PRINCIPAL:3
ENSMUSG00000034761	Map4k5	ENSMUST00000171211	ENSMUSP00000126006	TRANSLATION	protein_coding	-	-	2	780	10	8.25	2.4	422.8	0	-4,-5	-	-	6.555	MINOR
ENSMUSG00000034761	Map4k5	ENSMUST00000126584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000041965	ENSMUSP00000042565	TRANSLATION	protein_coding	-	CCDS26176.1	1	1713	18	8.9	7.5	674	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000220619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000220657	ENSMUSP00000152591	TRANSLATION	protein_coding	start	-	3	232	0	0	0	21.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000222724	ENSMUSP00000152475	TRANSLATION	protein_coding	start/stop	-	3	249	0	0	0	195.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000221897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000222196	ENSMUSP00000152832	TRANSLATION	protein_coding	stop	-	3	175	10	4.35	0	33.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021279	Cdc42bpb	ENSMUST00000222483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090258	Churc1	ENSMUST00000126408	ENSMUSP00000122587	TRANSLATION	protein_coding	-	-	2	35	2	1	0	48.7	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000090258	Churc1	ENSMUST00000152917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090258	Churc1	ENSMUST00000041262	ENSMUSP00000047015	TRANSLATION	protein_coding	-	CCDS36478.1	1	112	12	3	12.7	191	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000090258	Churc1	ENSMUST00000110399	ENSMUSP00000106029	TRANSLATION	protein_coding	-	-	1	70	5	1.5	0	90.4	0	-4,-5	-	-	4.332	MINOR
ENSMUSG00000020974	Pole2	ENSMUST00000221986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020974	Pole2	ENSMUST00000221411	ENSMUSP00000152262	TRANSLATION	protein_coding	-	-	1	502	0	4.22	0	281.2	0	-4,0	-	-	10.458	MINOR
ENSMUSG00000020974	Pole2	ENSMUST00000221806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020974	Pole2	ENSMUST00000021359	ENSMUSP00000021359	TRANSLATION	protein_coding	-	CCDS36463.1	1	527	0	4.935	8.8	283.1	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000020952	Scfd1	ENSMUST00000219799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020952	Scfd1	ENSMUST00000219686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020952	Scfd1	ENSMUST00000021335	ENSMUSP00000021335	TRANSLATION	protein_coding	-	CCDS36439.1	1	639	0	14.0664	3.9	432.2	0	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000020952	Scfd1	ENSMUST00000218131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020952	Scfd1	ENSMUST00000219264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020952	Scfd1	ENSMUST00000219434	ENSMUSP00000151347	TRANSLATION	protein_coding	-	-	1	390	0	8.96	0.5	278.7	0	-4,-1	-	-	0	MINOR
ENSMUSG00000020952	Scfd1	ENSMUST00000218138	ENSMUSP00000151379	TRANSLATION	nonsense_mediated_decay	start	-	3	159	0	2.44	0	43	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020658	Efr3b	ENSMUST00000219331	ENSMUSP00000151581	TRANSLATION	nonsense_mediated_decay	start	-	3	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020658	Efr3b	ENSMUST00000111178	ENSMUSP00000106809	TRANSLATION	protein_coding	-	CCDS49016.1	1	817	0	1.64	7.6	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000020658	Efr3b	ENSMUST00000218545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020658	Efr3b	ENSMUST00000219797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020658	Efr3b	ENSMUST00000217677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020658	Efr3b	ENSMUST00000218166	ENSMUSP00000151788	TRANSLATION	protein_coding	start	-	1	657	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001729	Akt1	ENSMUST00000127902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001729	Akt1	ENSMUST00000139388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001729	Akt1	ENSMUST00000123563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001729	Akt1	ENSMUST00000130342	ENSMUSP00000118190	TRANSLATION	protein_coding	stop	-	3	134	9	3.5	0	63.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001729	Akt1	ENSMUST00000001780	ENSMUSP00000001780	TRANSLATION	protein_coding	-	CCDS26194.1	1	480	27	11.91	17	364.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000001729	Akt1	ENSMUST00000128300	ENSMUSP00000122222	TRANSLATION	protein_coding	-	-	5	437	23	10.91	0	279.6	0	-4,-6	-	-	8.238	MINOR
ENSMUSG00000001729	Akt1	ENSMUST00000159815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001729	Akt1	ENSMUST00000127588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001729	Akt1	ENSMUST00000144550	ENSMUSP00000123689	TRANSLATION	protein_coding	stop	-	5	202	17	5.33	0	93.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021176	Efcab11	ENSMUST00000223108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021176	Efcab11	ENSMUST00000221929	ENSMUSP00000152099	TRANSLATION	protein_coding	start	-	1	163	6	3.084	0	49.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021176	Efcab11	ENSMUST00000221801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021176	Efcab11	ENSMUST00000221197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021176	Efcab11	ENSMUST00000223114	ENSMUSP00000152734	TRANSLATION	protein_coding	-	CCDS26104.1	5	162	11	3.684	5.1	59.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021176	Efcab11	ENSMUST00000046485	ENSMUSP00000044808	TRANSLATION	protein_coding	-	CCDS26104.1	1	162	11	3.684	5.1	59.4	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021176	Efcab11	ENSMUST00000220875	ENSMUSP00000152256	TRANSLATION	nonsense_mediated_decay	start	-	3	36	6	0.64	0	15.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096498	Ighv2-5	ENSMUST00000103449	ENSMUSP00000100230	TRANSLATION	IG_V_gene	stop	-	-	115	3	1.3	0	50.4	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096498	Ighv2-5	ENSMUST00000195707	ENSMUSP00000142302	TRANSLATION	IG_V_gene	stop	-	-	116	3	1	0	50.4	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000086022	Rad51ap2	ENSMUST00000124065	ENSMUSP00000128854	TRANSLATION	protein_coding	-	CCDS49029.1	2	976	0	0	0.5	61.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021286	Zfyve21	ENSMUST00000221313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021286	Zfyve21	ENSMUST00000221375	ENSMUSP00000152422	TRANSLATION	protein_coding	-	-	1	253	8	4.33	2.7	223.5	0	-4,-1	-	-	17.542	MINOR
ENSMUSG00000021286	Zfyve21	ENSMUST00000221488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021286	Zfyve21	ENSMUST00000223211	ENSMUSP00000152558	TRANSLATION	protein_coding	start	-	3	263	8	4.33	0	223.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021286	Zfyve21	ENSMUST00000222843	ENSMUSP00000152136	TRANSLATION	protein_coding	-	-	3	181	8	3.25	0	155.9	0	-4,-1	-	-	10.74	MINOR
ENSMUSG00000021286	Zfyve21	ENSMUST00000021714	ENSMUSP00000021714	TRANSLATION	protein_coding	-	CCDS56865.1	1	234	8	4.58	3.9	232.6	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000021286	Zfyve21	ENSMUST00000220616	ENSMUSP00000152084	TRANSLATION	protein_coding	stop	-	3	108	7	2.35	0	115	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021022	Ppp2r3c	ENSMUST00000219809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021022	Ppp2r3c	ENSMUST00000021410	ENSMUSP00000021410	TRANSLATION	protein_coding	-	CCDS36450.1	1	453	4	3.73	7.5	0	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021022	Ppp2r3c	ENSMUST00000218116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048562	Sp8	ENSMUST00000063918	ENSMUSP00000065746	TRANSLATION	protein_coding	-	CCDS26213.1	1	486	12	0.4	1.5	67.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000048562	Sp8	ENSMUST00000223305	ENSMUSP00000152523	TRANSLATION	protein_coding	stop	-	3	181	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096020	Ighv1-75	ENSMUST00000103544	ENSMUSP00000100325	TRANSLATION	IG_V_gene	stop	-	-	117	9	1.5	0	57	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000096884	Ighd5-4	ENSMUST00000177646	ENSMUSP00000141852	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000095889	Ighv1-58	ENSMUST00000103529	ENSMUSP00000100310	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	57.7	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000025321	Itgb8	ENSMUST00000151023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025321	Itgb8	ENSMUST00000137804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025321	Itgb8	ENSMUST00000026360	ENSMUSP00000026360	TRANSLATION	protein_coding	-	CCDS36580.1	1	767	9	8.95	7.5	418.3	0	-1,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000019969	Psen1	ENSMUST00000221993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019969	Psen1	ENSMUST00000041806	ENSMUSP00000048363	TRANSLATION	protein_coding	-	CCDS26030.1	1	467	0	9.25	3.9	549.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000019969	Psen1	ENSMUST00000101225	ENSMUSP00000098786	TRANSLATION	protein_coding	-	CCDS26030.1	5	467	0	9.25	3.9	549.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000019969	Psen1	ENSMUST00000223542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019969	Psen1	ENSMUST00000221072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000159120	ENSMUSP00000125339	TRANSLATION	protein_coding	-	CCDS56830.1	1	1926	12	0	1.5	3222.3	0	-4,-7	-	-	7.092	MINOR
ENSMUSG00000036523	Greb1	ENSMUST00000048064	ENSMUSP00000044454	TRANSLATION	protein_coding	-	CCDS36408.1	1	1954	12	0	1.5	3304.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036523	Greb1	ENSMUST00000161998	ENSMUSP00000124275	TRANSLATION	protein_coding	stop	-	3	151	0	0	0	286.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036523	Greb1	ENSMUST00000160755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000160627	ENSMUSP00000124922	TRANSLATION	nonsense_mediated_decay	start	-	3	123	0	0	0	129.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036523	Greb1	ENSMUST00000160347	ENSMUSP00000124897	TRANSLATION	protein_coding	start/stop	-	5	121	0	0	0	194.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036523	Greb1	ENSMUST00000160575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000159573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000160851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000161036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036523	Greb1	ENSMUST00000162112	ENSMUSP00000124348	TRANSLATION	protein_coding	-	CCDS36408.1	5	1954	12	0	1.5	3304.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036523	Greb1	ENSMUST00000159044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076674	Ighv3-8	ENSMUST00000103483	ENSMUSP00000100264	TRANSLATION	IG_V_gene	stop	-	-	131	7	1.3	0	46.6	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000045930	Clec14a	ENSMUST00000062254	ENSMUSP00000054451	TRANSLATION	protein_coding	-	CCDS25930.1	-	459	0	0	0.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000020636	Allc	ENSMUST00000110917	ENSMUSP00000106542	TRANSLATION	protein_coding	-	CCDS25850.1	1	414	0	4.105	3.9	293.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020636	Allc	ENSMUST00000020965	ENSMUSP00000020965	TRANSLATION	protein_coding	-	CCDS25850.1	1	414	0	4.105	3.9	293.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000079108	Srp54c	ENSMUST00000164243	ENSMUSP00000132835	TRANSLATION	protein_coding	-	CCDS49067.1	5	504	11	13	19.5	437.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079108	Srp54c	ENSMUST00000218879	ENSMUSP00000151681	TRANSLATION	protein_coding	-	CCDS49067.1	1	504	11	13	19.5	437.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000072825	Cep170b	ENSMUST00000223104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072825	Cep170b	ENSMUST00000221570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072825	Cep170b	ENSMUST00000221853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072825	Cep170b	ENSMUST00000221125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072825	Cep170b	ENSMUST00000222711	ENSMUSP00000152451	TRANSLATION	protein_coding	-	CCDS56867.1	5	1574	0	4.1	1.5	1060.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000072825	Cep170b	ENSMUST00000179041	ENSMUSP00000137331	TRANSLATION	protein_coding	-	-	5	1574	0	4.1	1.5	1060.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000072825	Cep170b	ENSMUST00000092279	ENSMUSP00000089930	TRANSLATION	protein_coding	-	-	5	658	0	4.1	0	633.8	0	-4,0	-	-	6	MINOR
ENSMUSG00000072825	Cep170b	ENSMUST00000220942	ENSMUSP00000152673	TRANSLATION	protein_coding	stop	-	2	21	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072825	Cep170b	ENSMUST00000220627	ENSMUSP00000152143	TRANSLATION	protein_coding	-	-	1	1539	0	4.1	1.5	539	0	-4,0	-	-	6	MINOR
ENSMUSG00000072825	Cep170b	ENSMUST00000222612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072825	Cep170b	ENSMUST00000101018	ENSMUSP00000098580	TRANSLATION	protein_coding	-	CCDS56867.1	1	1574	0	4.1	1.5	1060.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000072825	Cep170b	ENSMUST00000222532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035860	Cdhr3	ENSMUST00000219065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035860	Cdhr3	ENSMUST00000219453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035860	Cdhr3	ENSMUST00000219158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035860	Cdhr3	ENSMUST00000095774	ENSMUSP00000093449	TRANSLATION	protein_coding	-	CCDS36430.1	1	831	35	7.56	1.5	98.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000096420	Ighd5-6	ENSMUST00000195858	ENSMUSP00000142162	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096420	Ighd5-6	ENSMUST00000179932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020608	Smc6	ENSMUST00000218866	ENSMUSP00000151976	TRANSLATION	protein_coding	-	-	1	326	13	3.0338	0	58.9	0	-4,-5	-	-	8.568	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000218022	ENSMUSP00000151643	TRANSLATION	nonsense_mediated_decay	-	-	1	91	2	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000218319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020608	Smc6	ENSMUST00000217906	ENSMUSP00000151382	TRANSLATION	nonsense_mediated_decay	-	-	3	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000218958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020608	Smc6	ENSMUST00000020931	ENSMUSP00000020931	TRANSLATION	protein_coding	-	CCDS25815.1	1	1097	13	7.0938	5.1	116.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000020608	Smc6	ENSMUST00000217991	ENSMUSP00000151378	TRANSLATION	protein_coding	start/stop	-	3	179	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000219041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020608	Smc6	ENSMUST00000217930	ENSMUSP00000151232	TRANSLATION	protein_coding	start	-	5	100	0	0.84	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000219776	ENSMUSP00000152041	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020608	Smc6	ENSMUST00000220289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020608	Smc6	ENSMUST00000218815	ENSMUSP00000151435	TRANSLATION	protein_coding	start	-	3	103	0	0.92	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020572	Nampt	ENSMUST00000220200	ENSMUSP00000152015	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020572	Nampt	ENSMUST00000020886	ENSMUSP00000020886	TRANSLATION	protein_coding	-	CCDS25871.1	1	491	16	11.25	10.3	247.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000020572	Nampt	ENSMUST00000218491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076709	Ighv1-47	ENSMUST00000194865	ENSMUSP00000142265	TRANSLATION	IG_V_gene	stop	-	-	117	6	1.5	0	53.1	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076709	Ighv1-47	ENSMUST00000103518	ENSMUSP00000100299	TRANSLATION	IG_V_gene	start/stop	-	-	98	6	1	0	53.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000103290	Ighv1-23	ENSMUST00000194625	ENSMUSP00000141293	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	44.4	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021275	Tecpr2	ENSMUST00000169597	ENSMUSP00000126749	TRANSLATION	protein_coding	-	CCDS36562.1	1	1423	0	0	0.5	103.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021275	Tecpr2	ENSMUST00000221605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021275	Tecpr2	ENSMUST00000165978	ENSMUSP00000127949	TRANSLATION	protein_coding	-	CCDS36562.1	1	1423	0	0	0.5	103.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021275	Tecpr2	ENSMUST00000223210	ENSMUSP00000152826	TRANSLATION	nonsense_mediated_decay	-	-	1	363	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021275	Tecpr2	ENSMUST00000223246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094957	Ighd5-5	ENSMUST00000178815	ENSMUSP00000141414	TRANSLATION	IG_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000104452	Ighv8-8	ENSMUST00000192591	ENSMUSP00000142082	TRANSLATION	IG_V_gene	stop	-	-	119	3	1.2	0	49.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000061603	Akap6	ENSMUST00000219786	ENSMUSP00000151871	TRANSLATION	protein_coding	-	-	1	1224	0	0	0	25.4	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000061603	Akap6	ENSMUST00000095737	ENSMUSP00000093406	TRANSLATION	protein_coding	-	CCDS36444.1	1	2307	0	0	0.5	25.4	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000033373	Fntb	ENSMUST00000154743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033373	Fntb	ENSMUST00000123887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033373	Fntb	ENSMUST00000041008	ENSMUSP00000035498	TRANSLATION	protein_coding	-	CCDS25998.1	1	437	4	11.08	6.3	202	0	-4,-7	-	-	8.924	MINOR
ENSMUSG00000033373	Fntb	ENSMUST00000125842	ENSMUSP00000116906	TRANSLATION	nonsense_mediated_decay	-	-	5	74	4	1.5	0	89.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033373	Fntb	ENSMUST00000137826	ENSMUSP00000120713	TRANSLATION	protein_coding	-	-	5	471	7	12.33	0	333.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033373	Fntb	ENSMUST00000130605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033373	Fntb	ENSMUST00000136939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033373	Fntb	ENSMUST00000151864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005078	Jkamp	ENSMUST00000152381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005078	Jkamp	ENSMUST00000117449	ENSMUSP00000113744	TRANSLATION	protein_coding	-	CCDS56844.1	1	305	0	0	6.5	382.4	9	-4,-7	-	-	8.115	ALTERNATIVE:1
ENSMUSG00000005078	Jkamp	ENSMUST00000125764	ENSMUSP00000117251	TRANSLATION	protein_coding	stop	-	5	214	0	0	2.4	279.4	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000005078	Jkamp	ENSMUST00000134041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005078	Jkamp	ENSMUST00000132371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005078	Jkamp	ENSMUST00000145752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005078	Jkamp	ENSMUST00000057257	ENSMUSP00000061370	TRANSLATION	protein_coding	-	CCDS25967.1	1	311	0	0	8.8	382.4	9	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000020956	Dtd2	ENSMUST00000085404	ENSMUSP00000082525	TRANSLATION	protein_coding	-	CCDS83962.1	1	166	0	1.29	0.5	99.8	0	-4,-1	-	-	9.318	MINOR
ENSMUSG00000020956	Dtd2	ENSMUST00000021339	ENSMUSP00000021339	TRANSLATION	protein_coding	-	CCDS25903.1	1	168	0	1.69	10.8	120.8	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021061	Sptb	ENSMUST00000021458	ENSMUSP00000021458	TRANSLATION	protein_coding	-	CCDS36477.1	1	2329	0	26.26	3.9	1257.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021061	Sptb	ENSMUST00000170532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021061	Sptb	ENSMUST00000166101	ENSMUSP00000129782	TRANSLATION	protein_coding	-	-	5	2137	0	24.16	2.2	1197.7	0	-4,-5	-	-	4.608	MINOR
ENSMUSG00000095519	Ighv1-66	ENSMUST00000103537	ENSMUSP00000100318	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	60	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000020621	Rdh14	ENSMUST00000020947	ENSMUSP00000020947	TRANSLATION	protein_coding	-	CCDS25811.1	1	334	27	1.02	1.7	110.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000021051	Ppp2r5e	ENSMUST00000218930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021051	Ppp2r5e	ENSMUST00000218012	ENSMUSP00000151624	TRANSLATION	nonsense_mediated_decay	-	-	1	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021051	Ppp2r5e	ENSMUST00000220035	ENSMUSP00000151427	TRANSLATION	protein_coding	-	-	1	433	0	10.3	0	494.5	0	-4,-6	-	-	4.44	MINOR
ENSMUSG00000021051	Ppp2r5e	ENSMUST00000218716	ENSMUSP00000151905	TRANSLATION	protein_coding	stop	-	5	50	0	1.33	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021051	Ppp2r5e	ENSMUST00000021447	ENSMUSP00000021447	TRANSLATION	protein_coding	-	CCDS25983.1	1	467	0	11.08	19.5	645.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000062929	Cfl2	ENSMUST00000223095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062929	Cfl2	ENSMUST00000223320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062929	Cfl2	ENSMUST00000223450	ENSMUSP00000152320	TRANSLATION	nonsense_mediated_decay	-	-	2	58	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062929	Cfl2	ENSMUST00000221088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062929	Cfl2	ENSMUST00000078124	ENSMUSP00000077262	TRANSLATION	protein_coding	-	CCDS36448.1	1	166	0	3.75	19.5	103.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000062929	Cfl2	ENSMUST00000221374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020961	Ston2	ENSMUST00000170077	ENSMUSP00000126429	TRANSLATION	protein_coding	stop	-	3	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020961	Ston2	ENSMUST00000170984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020961	Ston2	ENSMUST00000166967	ENSMUSP00000128561	TRANSLATION	protein_coding	stop	-	2	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000020961	Ston2	ENSMUST00000052969	ENSMUSP00000053908	TRANSLATION	protein_coding	-	CCDS26090.1	1	895	0	0.74	2.7	211.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000020961	Ston2	ENSMUST00000111609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020961	Ston2	ENSMUST00000164713	ENSMUSP00000131098	TRANSLATION	protein_coding	-	-	5	898	0	0.74	0	210.3	0	-4,-5	-	-	11.916	ALTERNATIVE:2
ENSMUSG00000020961	Ston2	ENSMUST00000166008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044147	Arf6	ENSMUST00000050063	ENSMUSP00000055862	TRANSLATION	protein_coding	-	CCDS25952.1	1	175	19	1	21.5	262.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000113971	Gm2022	ENSMUST00000220585	ENSMUSP00000152354	TRANSLATION	protein_coding	-	-	-	144	0	1	3	67.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000072974	Gm4787	ENSMUST00000062182	ENSMUSP00000077390	TRANSLATION	protein_coding	-	CCDS26018.1	-	748	9	0.32	0.5	285.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000093847	Gm5039	ENSMUST00000177747	ENSMUSP00000136949	TRANSLATION	protein_coding	-	-	-	144	0	1	3	70.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000093847	Gm5039	ENSMUST00000218054	ENSMUSP00000151971	TRANSLATION	protein_coding	-	-	2	144	0	1	3	70.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021277	Traf3	ENSMUST00000139162	ENSMUSP00000119010	TRANSLATION	protein_coding	stop	-	3	97	9	1.5	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021277	Traf3	ENSMUST00000060274	ENSMUSP00000058361	TRANSLATION	protein_coding	-	CCDS36563.1	5	542	21	4.74	5.3	82.2	0	-4,-5	-	-	19.622	ALTERNATIVE:1
ENSMUSG00000021277	Traf3	ENSMUST00000117269	ENSMUSP00000112517	TRANSLATION	protein_coding	-	CCDS36563.1	1	542	21	4.74	5.3	82.2	0	-4,-5	-	-	19.622	ALTERNATIVE:1
ENSMUSG00000021277	Traf3	ENSMUST00000021706	ENSMUSP00000021706	TRANSLATION	protein_coding	-	CCDS26175.1	1	567	21	4.74	6.3	82.2	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000021277	Traf3	ENSMUST00000143395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000113786	Gm49384	ENSMUST00000222699	ENSMUSP00000152361	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	103	0	0	0	41.5	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000021048	Mthfd1	ENSMUST00000218513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021048	Mthfd1	ENSMUST00000021443	ENSMUSP00000021443	TRANSLATION	protein_coding	-	CCDS25990.1	1	935	18	22.3	7.6	1208	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000021048	Mthfd1	ENSMUST00000220046	ENSMUSP00000151500	TRANSLATION	protein_coding	-	-	1	755	16	17.05	1.2	1015.9	0	-4,-5	-	-	4.758	MINOR
ENSMUSG00000021048	Mthfd1	ENSMUST00000220321	ENSMUSP00000151668	TRANSLATION	protein_coding	stop	-	2	160	3	3.3	0	195.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021048	Mthfd1	ENSMUST00000218010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021048	Mthfd1	ENSMUST00000218110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021048	Mthfd1	ENSMUST00000218331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034266	Batf	ENSMUST00000040536	ENSMUSP00000040706	TRANSLATION	protein_coding	-	CCDS26061.1	1	125	0	1.2	1.5	47.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034266	Batf	ENSMUST00000222781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035247	Hectd1	ENSMUST00000217804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035247	Hectd1	ENSMUST00000179265	ENSMUSP00000136449	TRANSLATION	protein_coding	-	-	5	2618	0	9.78	0	465	0	-4,-7	-	-	11.13	MINOR
ENSMUSG00000035247	Hectd1	ENSMUST00000218626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035247	Hectd1	ENSMUST00000042052	ENSMUSP00000046766	TRANSLATION	protein_coding	-	CCDS49064.1	5	2610	0	9.93	7.6	474.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000035247	Hectd1	ENSMUST00000220098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002803	Btbd6	ENSMUST00000221500	ENSMUSP00000152193	TRANSLATION	protein_coding	stop	-	5	88	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002803	Btbd6	ENSMUST00000223508	ENSMUSP00000152335	TRANSLATION	protein_coding	start/stop	-	3	241	0	3.15	0	96.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002803	Btbd6	ENSMUST00000222209	ENSMUSP00000152636	TRANSLATION	protein_coding	-	-	3	95	0	0.3	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000002803	Btbd6	ENSMUST00000221104	ENSMUSP00000152889	TRANSLATION	protein_coding	-	CCDS49194.1	1	488	0	3.71	1.5	274.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002803	Btbd6	ENSMUST00000223287	ENSMUSP00000152389	TRANSLATION	nonsense_mediated_decay	-	-	2	95	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002803	Btbd6	ENSMUST00000223368	ENSMUSP00000152748	TRANSLATION	protein_coding	start	-	2	123	0	2.55	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002803	Btbd6	ENSMUST00000002880	ENSMUSP00000002880	TRANSLATION	protein_coding	-	CCDS49193.1	1	539	0	3.71	1.5	274.8	0	-2,0	-	-	12	PRINCIPAL:4
ENSMUSG00000002803	Btbd6	ENSMUST00000165079	ENSMUSP00000127286	TRANSLATION	protein_coding	-	CCDS49194.1	3	488	0	3.71	1.5	274.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002803	Btbd6	ENSMUST00000220567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021108	Prkch	ENSMUST00000221153	ENSMUSP00000152346	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	1	0	56.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021108	Prkch	ENSMUST00000021527	ENSMUSP00000021527	TRANSLATION	protein_coding	-	CCDS25976.1	1	683	19	8.75	12.8	426.4	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021108	Prkch	ENSMUST00000119092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021108	Prkch	ENSMUST00000220898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076695	Ighv1-18	ENSMUST00000194350	ENSMUSP00000142064	TRANSLATION	IG_V_gene	stop	-	-	117	5	2	0	52.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076695	Ighv1-18	ENSMUST00000103504	ENSMUSP00000100285	TRANSLATION	IG_V_gene	stop	-	-	102	5	1.5	0	29.9	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021285	Ppp1r13b	ENSMUST00000163747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021285	Ppp1r13b	ENSMUST00000054815	ENSMUSP00000062464	TRANSLATION	protein_coding	-	CCDS56866.1	1	1087	0	6.5	1.7	108	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021285	Ppp1r13b	ENSMUST00000220927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021285	Ppp1r13b	ENSMUST00000220486	ENSMUSP00000152424	TRANSLATION	protein_coding	start	-	5	964	0	4.7	0	108	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056770	Setd3	ENSMUST00000071095	ENSMUSP00000066413	TRANSLATION	protein_coding	-	CCDS26159.1	1	594	14	11.21	1.5	163	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000056770	Setd3	ENSMUST00000132682	ENSMUSP00000123159	TRANSLATION	nonsense_mediated_decay	-	-	1	81	0	2.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056770	Setd3	ENSMUST00000169951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056770	Setd3	ENSMUST00000147466	ENSMUSP00000121406	TRANSLATION	nonsense_mediated_decay	-	-	1	81	0	2.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056770	Setd3	ENSMUST00000148119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056770	Setd3	ENSMUST00000109879	ENSMUSP00000105505	TRANSLATION	protein_coding	-	-	3	290	11	6.91	0	33.9	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000056770	Setd3	ENSMUST00000125210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056770	Setd3	ENSMUST00000125916	ENSMUSP00000122520	TRANSLATION	protein_coding	stop	-	3	155	4	4.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000020601	Trib2	ENSMUST00000221518	ENSMUSP00000152535	TRANSLATION	protein_coding	-	-	5	207	0	2	2.2	109.2	0	-4,-7	-	-	7.742	MINOR
ENSMUSG00000020601	Trib2	ENSMUST00000020922	ENSMUSP00000020922	TRANSLATION	protein_coding	-	CCDS25821.1	1	343	0	3.93	15	121.6	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000020601	Trib2	ENSMUST00000221215	ENSMUSP00000152685	TRANSLATION	protein_coding	stop	-	5	122	0	0.93	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000020601	Trib2	ENSMUST00000151100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095416	Ighv1-12	ENSMUST00000195469	ENSMUSP00000142024	TRANSLATION	IG_V_gene	stop	-	-	117	5	2.5	0	58.2	0	4,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000095416	Ighv1-12	ENSMUST00000109711	ENSMUSP00000105333	TRANSLATION	IG_V_gene	stop	-	-	60	1	1.5	0	27	0	3,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095416	Ighv1-12	ENSMUST00000103500	ENSMUSP00000100281	TRANSLATION	IG_V_gene	start/stop	-	-	98	5	2	0	58.2	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094241	Ighv1-24	ENSMUST00000103509	ENSMUSP00000100290	TRANSLATION	IG_V_gene	start/stop	-	-	98	3	1	0	37.9	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094241	Ighv1-24	ENSMUST00000191861	ENSMUSP00000142245	TRANSLATION	IG_V_gene	stop	-	-	117	3	1.5	0	37.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000021009	Ptpn21	ENSMUST00000221148	ENSMUSP00000152695	TRANSLATION	nonsense_mediated_decay	-	-	1	374	0	5.38	0	202.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021009	Ptpn21	ENSMUST00000221932	ENSMUSP00000152639	TRANSLATION	protein_coding	stop	-	1	850	0	5.38	0	200.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021009	Ptpn21	ENSMUST00000221535	ENSMUSP00000152067	TRANSLATION	nonsense_mediated_decay	-	-	5	450	0	5.38	0	202.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021009	Ptpn21	ENSMUST00000223321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021009	Ptpn21	ENSMUST00000170188	ENSMUSP00000126975	TRANSLATION	protein_coding	-	CCDS26098.1	1	1176	11	11.41	0.5	443.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021009	Ptpn21	ENSMUST00000085116	ENSMUSP00000082197	TRANSLATION	protein_coding	-	CCDS26098.1	1	1176	11	11.41	0.5	443.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021009	Ptpn21	ENSMUST00000222071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035431	Sstr1	ENSMUST00000110671	ENSMUSP00000106299	TRANSLATION	protein_coding	-	CCDS36456.1	2	391	0	0.8	3.9	213.7	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000035431	Sstr1	ENSMUST00000044299	ENSMUSP00000037045	TRANSLATION	protein_coding	-	CCDS36456.1	1	391	0	0.8	3.9	213.7	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000072946	Ptgr2	ENSMUST00000128541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072946	Ptgr2	ENSMUST00000146377	ENSMUSP00000119981	TRANSLATION	protein_coding	-	CCDS36490.1	1	351	25	7.5	8.8	151.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000072946	Ptgr2	ENSMUST00000123614	ENSMUSP00000115704	TRANSLATION	protein_coding	-	CCDS36490.1	1	351	25	7.5	8.8	151.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000072946	Ptgr2	ENSMUST00000150720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072946	Ptgr2	ENSMUST00000128158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072946	Ptgr2	ENSMUST00000123693	ENSMUSP00000115506	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	1.5	0	42.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072946	Ptgr2	ENSMUST00000135001	ENSMUSP00000114559	TRANSLATION	protein_coding	-	-	5	315	21	6.25	0	151.1	0	-4,-7	-	-	12.834	MINOR
ENSMUSG00000072946	Ptgr2	ENSMUST00000138733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072946	Ptgr2	ENSMUST00000147363	ENSMUSP00000114766	TRANSLATION	protein_coding	-	-	1	316	21	6.25	0	151.1	0	-4,-7	-	-	12.834	MINOR
ENSMUSG00000002804	Nudt14	ENSMUST00000221397	ENSMUSP00000152599	TRANSLATION	protein_coding	-	CCDS26201.1	1	222	12	3.9	6.3	26.7	0	-4,-6	-	-	19.64	PRINCIPAL:1
ENSMUSG00000002804	Nudt14	ENSMUST00000222793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002804	Nudt14	ENSMUST00000222932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002804	Nudt14	ENSMUST00000002881	ENSMUSP00000002881	TRANSLATION	protein_coding	-	-	2	210	12	3.4	0.5	28.4	0	-4,-6	-	-	16.998	MINOR
ENSMUSG00000002804	Nudt14	ENSMUST00000221497	ENSMUSP00000152398	TRANSLATION	protein_coding	-	-	2	66	4	1.4	0	0	0	-4,-5	-	-	1.668	MINOR
ENSMUSG00000076614	Ighg1	ENSMUST00000103420	ENSMUSP00000100216	TRANSLATION	IG_C_gene	start	-	-	324	5	3.5	0	220	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076614	Ighg1	ENSMUST00000194304	ENSMUSP00000141658	TRANSLATION	IG_C_gene	start	-	-	393	5	4.5	0	220	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000041781	Cpsf2	ENSMUST00000047357	ENSMUSP00000047797	TRANSLATION	protein_coding	-	CCDS26116.1	1	782	3	5.04	15	305.2	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000048483	Zdhhc22	ENSMUST00000095521	ENSMUSP00000093177	TRANSLATION	protein_coding	-	CCDS36500.1	1	263	2	0	5.1	84.3	4	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000048483	Zdhhc22	ENSMUST00000223336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048483	Zdhhc22	ENSMUST00000222543	ENSMUSP00000152660	TRANSLATION	protein_coding	-	CCDS36500.1	3	263	2	0	5.1	84.3	4	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000021187	Tc2n	ENSMUST00000160715	ENSMUSP00000125099	TRANSLATION	protein_coding	-	-	5	425	0	2.88	2.4	26.8	0	-4,-5	-	-	9.795	MINOR
ENSMUSG00000021187	Tc2n	ENSMUST00000110047	ENSMUSP00000105674	TRANSLATION	nonsense_mediated_decay	-	-	2	489	0	3.3	7.5	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021187	Tc2n	ENSMUST00000160830	ENSMUSP00000124287	TRANSLATION	protein_coding	-	CCDS36524.1	1	489	0	3.3	7.5	40.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021187	Tc2n	ENSMUST00000162735	ENSMUSP00000125288	TRANSLATION	protein_coding	-	CCDS36524.1	1	489	0	3.3	7.5	40.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000020638	Cmpk2	ENSMUST00000020969	ENSMUSP00000020969	TRANSLATION	protein_coding	-	CCDS49039.1	1	447	10	1.72	1.5	59.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000020638	Cmpk2	ENSMUST00000221060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020638	Cmpk2	ENSMUST00000220466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020638	Cmpk2	ENSMUST00000221826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021260	Hhipl1	ENSMUST00000021685	ENSMUSP00000021685	TRANSLATION	protein_coding	-	CCDS36554.1	1	791	2	3.91	1.5	169	0	1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000021260	Hhipl1	ENSMUST00000223395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096576	Oog1	ENSMUST00000222332	ENSMUSP00000152464	TRANSLATION	protein_coding	-	-	5	326	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000096576	Oog1	ENSMUST00000095509	ENSMUSP00000093165	TRANSLATION	protein_coding	-	CCDS49123.1	1	496	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000096576	Oog1	ENSMUST00000222112	ENSMUSP00000152182	TRANSLATION	protein_coding	-	-	1	306	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000076677	Ighv6-3	ENSMUST00000103486	ENSMUSP00000100267	TRANSLATION	IG_V_gene	stop	-	-	118	6	1.5	0	58.9	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021068	Nin	ENSMUST00000221486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021068	Nin	ENSMUST00000223257	ENSMUSP00000152350	TRANSLATION	protein_coding	-	-	1	1979	7	0	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000223469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021068	Nin	ENSMUST00000085314	ENSMUSP00000082422	TRANSLATION	protein_coding	-	CCDS36468.1	1	2113	7	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000021068	Nin	ENSMUST00000222466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021068	Nin	ENSMUST00000221579	ENSMUSP00000152553	TRANSLATION	protein_coding	start	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021068	Nin	ENSMUST00000095666	ENSMUSP00000093327	TRANSLATION	protein_coding	-	CCDS36469.1	5	2035	7	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000223316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021068	Nin	ENSMUST00000221275	ENSMUSP00000152096	TRANSLATION	protein_coding	stop	-	3	178	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021068	Nin	ENSMUST00000220689	ENSMUSP00000152530	TRANSLATION	protein_coding	-	-	1	1272	7	0	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000169074	ENSMUSP00000129648	TRANSLATION	protein_coding	-	CCDS36469.1	1	2035	7	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000221141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021068	Nin	ENSMUST00000223048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021068	Nin	ENSMUST00000222237	ENSMUSP00000152240	TRANSLATION	protein_coding	-	CCDS36468.1	5	2113	7	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000239242	ENSMUSP00000159203	TRANSLATION	protein_coding	start/stop	-	-	114	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021068	Nin	ENSMUST00000222835	ENSMUSP00000152395	TRANSLATION	protein_coding	stop	-	1	996	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021068	Nin	ENSMUST00000021468	ENSMUSP00000021468	TRANSLATION	protein_coding	-	CCDS36469.1	1	2035	7	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021068	Nin	ENSMUST00000222137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094198	Ighv1-50	ENSMUST00000103521	ENSMUSP00000100302	TRANSLATION	IG_V_gene	stop	-	-	117	8	1.5	0	57.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000035560	Wdr20rt	ENSMUST00000222822	ENSMUSP00000152487	TRANSLATION	protein_coding	start	-	1	466	0	4	0	38.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035560	Wdr20rt	ENSMUST00000221658	ENSMUSP00000152408	TRANSLATION	protein_coding	-	-	5	366	0	3.132	0	38.8	0	-4,-5	-	-	8.262	MINOR
ENSMUSG00000035560	Wdr20rt	ENSMUST00000221980	ENSMUSP00000152626	TRANSLATION	protein_coding	-	-	5	420	0	2	0	38.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000035560	Wdr20rt	ENSMUST00000046331	ENSMUSP00000036682	TRANSLATION	protein_coding	-	CCDS25943.1	1	567	0	5	2.9	38.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047832	Cdca4	ENSMUST00000062092	ENSMUSP00000058901	TRANSLATION	protein_coding	-	CCDS26198.1	1	237	0	0	1.5	62.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047832	Cdca4	ENSMUST00000220899	ENSMUSP00000152315	TRANSLATION	protein_coding	-	CCDS26198.1	1	237	0	0	1.5	62.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047832	Cdca4	ENSMUST00000223432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042050	Wdr60	ENSMUST00000039349	ENSMUSP00000047334	TRANSLATION	protein_coding	-	CCDS36575.1	1	999	0	0	1.5	14.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042050	Wdr60	ENSMUST00000221029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042050	Wdr60	ENSMUST00000222539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042050	Wdr60	ENSMUST00000222679	ENSMUSP00000152429	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042050	Wdr60	ENSMUST00000223039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042050	Wdr60	ENSMUST00000221748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042050	Wdr60	ENSMUST00000220761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042050	Wdr60	ENSMUST00000222764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046157	Tmem229b	ENSMUST00000056660	ENSMUSP00000053835	TRANSLATION	protein_coding	-	CCDS26005.1	1	167	0	0	6.3	0	5	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000046157	Tmem229b	ENSMUST00000174072	ENSMUSP00000134376	TRANSLATION	protein_coding	-	CCDS26005.1	1	167	0	0	6.3	0	5	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000046157	Tmem229b	ENSMUST00000174344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046157	Tmem229b	ENSMUST00000174721	ENSMUSP00000134605	TRANSLATION	protein_coding	stop	-	3	102	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000046157	Tmem229b	ENSMUST00000070174	ENSMUSP00000070637	TRANSLATION	protein_coding	-	CCDS26005.1	1	167	0	0	6.3	0	5	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000046157	Tmem229b	ENSMUST00000173095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046157	Tmem229b	ENSMUST00000174697	ENSMUSP00000134348	TRANSLATION	protein_coding	-	CCDS26005.1	5	167	0	0	6.3	0	5	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000076688	Ighv15-2	ENSMUST00000103497	ENSMUSP00000100278	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	39.9	0	0,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076688	Ighv15-2	ENSMUST00000195337	ENSMUSP00000141867	TRANSLATION	IG_V_gene	stop	-	-	118	0	1.5	0	39.9	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000076731	Ighv8-12	ENSMUST00000199266	ENSMUSP00000142333	TRANSLATION	IG_V_gene	stop	-	-	119	6	1.264	0	54.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076731	Ighv8-12	ENSMUST00000103540	ENSMUSP00000100321	TRANSLATION	IG_V_gene	start/stop	-	-	105	6	1	0	46.1	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000079031	BB287469	ENSMUST00000110149	ENSMUSP00000105776	TRANSLATION	protein_coding	-	CCDS49126.1	1	144	0	1	3	68.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000020673	Tpo	ENSMUST00000155263	ENSMUSP00000133853	TRANSLATION	protein_coding	-	-	1	164	0	1.44	0	0	1	-1,-5	-	-	0	MINOR
ENSMUSG00000020673	Tpo	ENSMUST00000140875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020673	Tpo	ENSMUST00000021005	ENSMUSP00000021005	TRANSLATION	protein_coding	-	CCDS25857.1	1	914	25	7.94	1.5	668.7	2	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037149	Ddx1	ENSMUST00000221623	ENSMUSP00000152513	TRANSLATION	protein_coding	stop	-	3	190	7	5.58	0	115.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037149	Ddx1	ENSMUST00000221028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037149	Ddx1	ENSMUST00000071103	ENSMUSP00000065987	TRANSLATION	protein_coding	-	CCDS25819.1	1	740	13	14.732	15	451.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000008438	Adam21	ENSMUST00000008582	ENSMUSP00000008582	TRANSLATION	protein_coding	-	CCDS26022.1	1	729	18	0.48	1.5	397.3	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000073197	5730507C01Rik	ENSMUST00000063216	ENSMUSP00000099112	TRANSLATION	protein_coding	-	CCDS49035.1	1	392	31	2.4	0.5	184.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000073197	5730507C01Rik	ENSMUST00000177778	ENSMUSP00000137525	TRANSLATION	protein_coding	-	CCDS56831.1	1	416	31	2.4	0.5	184.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000002688	Prkd1	ENSMUST00000002765	ENSMUSP00000002765	TRANSLATION	protein_coding	-	CCDS49059.1	1	918	17	7.24	6.3	377.1	0	-1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000092019	Gm4027	ENSMUST00000164838	ENSMUSP00000132993	TRANSLATION	protein_coding	-	CCDS49124.1	1	144	0	1	3	68.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000048285	Frmd6	ENSMUST00000057859	ENSMUSP00000052202	TRANSLATION	protein_coding	-	CCDS25959.1	1	622	0	3.585	6.3	151.2	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000048285	Frmd6	ENSMUST00000222802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048285	Frmd6	ENSMUST00000220515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048285	Frmd6	ENSMUST00000222045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095724	Gm21319	ENSMUST00000164517	ENSMUSP00000126351	TRANSLATION	protein_coding	-	CCDS56850.1	1	144	0	1	3	69.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000034435	Tmem30b	ENSMUST00000042975	ENSMUSP00000037476	TRANSLATION	protein_coding	-	CCDS25975.1	-	353	0	0	1.8	303.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000020654	Adcy3	ENSMUST00000127110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020654	Adcy3	ENSMUST00000124505	ENSMUSP00000122073	TRANSLATION	protein_coding	-	CCDS49017.1	1	1144	7	9.02	7.5	531.2	8	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020654	Adcy3	ENSMUST00000134680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000020654	Adcy3	ENSMUST00000020984	ENSMUSP00000020984	TRANSLATION	protein_coding	-	CCDS25787.1	1	1145	7	9.02	7.5	531.2	8	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000020654	Adcy3	ENSMUST00000127756	ENSMUSP00000115406	TRANSLATION	protein_coding	-	CCDS25787.1	5	1145	7	9.02	7.5	531.2	8	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000020654	Adcy3	ENSMUST00000152792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000020654	Adcy3	ENSMUST00000152065	ENSMUSP00000115644	TRANSLATION	protein_coding	-	CCDS49017.1	1	1144	7	9.02	7.5	531.2	8	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000020654	Adcy3	ENSMUST00000150944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047094	Ofcc1	ENSMUST00000054635	ENSMUSP00000062217	TRANSLATION	protein_coding	-	CCDS49241.1	1	926	0	0	0.5	184.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047094	Ofcc1	ENSMUST00000224813	ENSMUSP00000153579	TRANSLATION	protein_coding	-	-	-	166	0	0	0	138.8	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000047094	Ofcc1	ENSMUST00000224909	ENSMUSP00000153016	TRANSLATION	nonsense_mediated_decay	-	-	-	186	0	0	0	184.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000085861	Armh2	ENSMUST00000136906	ENSMUSP00000153199	TRANSLATION	protein_coding	-	-	1	238	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000099917	Vmn1r215	ENSMUST00000228092	ENSMUSP00000154763	TRANSLATION	protein_coding	-	CCDS26330.1	-	300	0	0	0.5	123.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000099917	Vmn1r215	ENSMUST00000072972	ENSMUSP00000072739	TRANSLATION	protein_coding	-	CCDS26330.1	-	300	0	0	0.5	123.5	5	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021495	Fam193b	ENSMUST00000225703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021495	Fam193b	ENSMUST00000225240	ENSMUSP00000153687	TRANSLATION	protein_coding	-	-	-	812	0	0	0.5	98.4	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000021495	Fam193b	ENSMUST00000224249	ENSMUSP00000153620	TRANSLATION	protein_coding	start/stop	-	-	242	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021495	Fam193b	ENSMUST00000224486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021495	Fam193b	ENSMUST00000021957	ENSMUSP00000021957	TRANSLATION	protein_coding	-	CCDS36678.1	1	778	0	0	1.5	98.4	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000021495	Fam193b	ENSMUST00000224572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021495	Fam193b	ENSMUST00000224275	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021495	Fam193b	ENSMUST00000225262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021474	Sfxn1	ENSMUST00000223504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021474	Sfxn1	ENSMUST00000222285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021474	Sfxn1	ENSMUST00000021930	ENSMUSP00000021930	TRANSLATION	protein_coding	-	CCDS26525.1	1	322	0	0	17	501.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000021469	Msx2	ENSMUST00000021922	ENSMUSP00000021922	TRANSLATION	protein_coding	-	CCDS26522.1	1	267	0	1	7.5	75.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021469	Msx2	ENSMUST00000188606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021718	Nt5el	ENSMUST00000022232	ENSMUSP00000022232	TRANSLATION	protein_coding	-	CCDS26755.1	1	585	16	3.82	0.5	173	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021694	Ercc8	ENSMUST00000123138	ENSMUSP00000119212	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	1.75	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000123182	ENSMUSP00000121777	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	1.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000133957	ENSMUSP00000116226	TRANSLATION	nonsense_mediated_decay	start	-	5	54	0	1.75	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000152634	ENSMUSP00000122802	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	1.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000120672	ENSMUSP00000112746	TRANSLATION	protein_coding	-	-	1	200	0	5.43	0	13.4	0	-4,0	-	-	1.038	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000137425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021694	Ercc8	ENSMUST00000123657	ENSMUSP00000117492	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	1.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000054835	ENSMUSP00000059211	TRANSLATION	protein_coding	-	CCDS26761.1	1	397	0	10.18	10.8	77.5	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000021694	Ercc8	ENSMUST00000142931	ENSMUSP00000118154	TRANSLATION	nonsense_mediated_decay	-	-	5	194	0	5.19	0	13.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021694	Ercc8	ENSMUST00000129117	ENSMUSP00000116507	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	1.75	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000039004	Bmp6	ENSMUST00000171970	ENSMUSP00000126999	TRANSLATION	protein_coding	-	CCDS26462.1	1	510	0	4.48	1.5	462.8	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000039004	Bmp6	ENSMUST00000223628	ENSMUSP00000152947	TRANSLATION	protein_coding	stop	-	-	71	0	0.2	0	40.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039004	Bmp6	ENSMUST00000224452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021540	Smad5	ENSMUST00000109876	ENSMUSP00000105502	TRANSLATION	protein_coding	-	CCDS26565.1	1	465	4	4.62	14.8	394.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021540	Smad5	ENSMUST00000132302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021540	Smad5	ENSMUST00000109874	ENSMUSP00000105500	TRANSLATION	protein_coding	-	CCDS26565.1	1	465	4	4.62	14.8	394.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021540	Smad5	ENSMUST00000069557	ENSMUSP00000065798	TRANSLATION	protein_coding	-	CCDS26565.1	1	465	4	4.62	14.8	394.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021540	Smad5	ENSMUST00000136702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021540	Smad5	ENSMUST00000138677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021216	Tubal3	ENSMUST00000223035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021216	Tubal3	ENSMUST00000021639	ENSMUSP00000021639	TRANSLATION	protein_coding	-	CCDS49202.1	1	446	25	2.7	4.1	376.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000091387	Gcnt4	ENSMUST00000171324	ENSMUSP00000130496	TRANSLATION	protein_coding	-	CCDS49336.1	1	455	17	0.64	0.5	169.8	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021453	Gadd45g	ENSMUST00000021903	ENSMUSP00000021903	TRANSLATION	protein_coding	-	CCDS26515.1	1	159	0	3.5	13	46.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021453	Gadd45g	ENSMUST00000132480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044792	Isca1	ENSMUST00000225850	ENSMUSP00000153175	TRANSLATION	nonsense_mediated_decay	-	-	-	49	0	0.55	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000044792	Isca1	ENSMUST00000160628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044792	Isca1	ENSMUST00000225795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044792	Isca1	ENSMUST00000225284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044792	Isca1	ENSMUST00000057115	ENSMUSP00000054858	TRANSLATION	protein_coding	-	CCDS26578.1	1	129	4	2.35	20.3	0	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000044792	Isca1	ENSMUST00000225877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044792	Isca1	ENSMUST00000224636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034488	Edil3	ENSMUST00000043111	ENSMUSP00000044652	TRANSLATION	protein_coding	-	CCDS26670.1	1	470	13	9	8.5	297.7	0	1,-2	-	-	19.482	MINOR
ENSMUSG00000034488	Edil3	ENSMUST00000140625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034488	Edil3	ENSMUST00000153974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034488	Edil3	ENSMUST00000133761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034488	Edil3	ENSMUST00000137921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034488	Edil3	ENSMUST00000134241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034488	Edil3	ENSMUST00000118731	ENSMUSP00000112829	TRANSLATION	protein_coding	-	-	1	384	13	7.33	0	186.9	0	1,-2	-	-	7.998	MINOR
ENSMUSG00000034488	Edil3	ENSMUST00000081769	ENSMUSP00000080462	TRANSLATION	protein_coding	-	CCDS26669.1	1	480	13	9.33	11.5	297.7	0	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000091768	Gm17617	ENSMUST00000164344	ENSMUSP00000127490	TRANSLATION	protein_coding	start/stop	-	5	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000225866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000225674	ENSMUSP00000152935	TRANSLATION	protein_coding	-	CCDS79199.1	-	464	0	6.714	8.8	256.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176207	ENSMUSP00000135354	TRANSLATION	protein_coding	-	CCDS79197.1	1	439	0	6.504	7.6	256.4	0	-4,-5	-	-	14.118	ALTERNATIVE:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000116403	ENSMUSP00000112104	TRANSLATION	protein_coding	-	CCDS79199.1	1	464	0	6.714	8.8	256.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000225176	ENSMUSP00000153487	TRANSLATION	protein_coding	stop	-	-	230	0	4.134	0	184.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000226015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000225031	ENSMUSP00000153320	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0.82	0	122.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176849	ENSMUSP00000135342	TRANSLATION	protein_coding	stop	-	5	299	0	3.924	0	184.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224524	ENSMUSP00000153054	TRANSLATION	protein_coding	stop	-	-	192	0	3.606	0	170.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224030	ENSMUSP00000153416	TRANSLATION	protein_coding	stop	-	-	143	0	1.862	0	140.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000043269	ENSMUSP00000039269	TRANSLATION	protein_coding	-	CCDS49283.1	1	463	0	6.714	7.6	256.4	0	-4,-5	-	-	14.538	PRINCIPAL:3
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176305	ENSMUSP00000135305	TRANSLATION	protein_coding	stop	-	5	256	0	4.134	0	184.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000223822	ENSMUSP00000153705	TRANSLATION	protein_coding	stop	-	-	52	0	0.32	0	98.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177117	ENSMUSP00000135109	TRANSLATION	protein_coding	stop	-	3	87	0	2.176	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224342	ENSMUSP00000153651	TRANSLATION	protein_coding	stop	-	-	150	0	2.06	0	140.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224182	ENSMUSP00000153253	TRANSLATION	protein_coding	-	CCDS79199.1	-	464	0	6.714	8.8	256.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176558	ENSMUSP00000135623	TRANSLATION	protein_coding	-	-	2	97	0	1.12	0	134.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177060	ENSMUSP00000135407	TRANSLATION	protein_coding	stop	-	5	178	0	3.896	0	166.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177497	ENSMUSP00000135833	TRANSLATION	protein_coding	-	-	1	394	0	5.894	0	117	0	-4,-5	-	-	4.362	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000177019	ENSMUSP00000135647	TRANSLATION	protein_coding	-	CCDS79198.1	1	440	0	6.504	7.6	256.4	0	-4,-5	-	-	14.118	ALTERNATIVE:1
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176797	ENSMUSP00000135867	TRANSLATION	protein_coding	start	-	3	210	0	1.014	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000176269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000175939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021546	Hnrnpk	ENSMUST00000224836	ENSMUSP00000153523	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0.82	0	122.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021546	Hnrnpk	ENSMUST00000175847	ENSMUSP00000134837	TRANSLATION	nonsense_mediated_decay	-	-	3	77	0	0.82	0	122.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050919	Zfp366	ENSMUST00000056558	ENSMUSP00000060040	TRANSLATION	protein_coding	-	CCDS26720.1	1	746	43	2	0.5	187.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094777	Hist1h2ap	ENSMUST00000081342	ENSMUSP00000080088	TRANSLATION	protein_coding	-	CCDS26301.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021362	Gcm2	ENSMUST00000021791	ENSMUSP00000021791	TRANSLATION	protein_coding	-	CCDS26472.1	1	504	8	3.6	1.5	236.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021362	Gcm2	ENSMUST00000225420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021362	Gcm2	ENSMUST00000225271	ENSMUSP00000153244	TRANSLATION	protein_coding	stop	-	-	183	8	3.6	0	236.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032846	Zswim6	ENSMUST00000224719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032846	Zswim6	ENSMUST00000225197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032846	Zswim6	ENSMUST00000225822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032846	Zswim6	ENSMUST00000105097	ENSMUSP00000158926	TRANSLATION	protein_coding	-	-	5	1207	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021211	Akr1c12	ENSMUST00000021632	ENSMUSP00000021632	TRANSLATION	protein_coding	-	CCDS26222.1	1	323	27	7.75	1.5	208	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046169	Adamts6	ENSMUST00000224784	ENSMUSP00000153665	TRANSLATION	nonsense_mediated_decay	-	-	-	468	6	3.91	0	215.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000046169	Adamts6	ENSMUST00000065766	ENSMUSP00000064570	TRANSLATION	protein_coding	-	CCDS36773.1	5	1117	11	9	5.1	500.6	0	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000046169	Adamts6	ENSMUST00000224208	ENSMUSP00000153359	TRANSLATION	protein_coding	-	CCDS36773.1	-	1117	11	9	5.1	500.6	0	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000046169	Adamts6	ENSMUST00000224303	ENSMUSP00000153431	TRANSLATION	nonsense_mediated_decay	-	-	-	292	1	0.6	1.3	139	0	0,-3	-	-	-1	MINOR
ENSMUSG00000046169	Adamts6	ENSMUST00000223562	ENSMUSP00000153504	TRANSLATION	nonsense_mediated_decay	-	-	-	468	6	3.91	0	215.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000046169	Adamts6	ENSMUST00000224742	ENSMUSP00000152936	TRANSLATION	nonsense_mediated_decay	-	-	-	292	1	0.6	1.3	139	0	0,-3	-	-	-1	MINOR
ENSMUSG00000046169	Adamts6	ENSMUST00000224504	ENSMUSP00000153194	TRANSLATION	nonsense_mediated_decay	start	-	-	96	1	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021388	Aspn	ENSMUST00000177948	ENSMUSP00000136728	TRANSLATION	protein_coding	-	CCDS26503.1	1	373	0	6.4	5.1	148.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021388	Aspn	ENSMUST00000021820	ENSMUSP00000021820	TRANSLATION	protein_coding	-	CCDS26503.1	1	373	0	6.4	5.1	148.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000095300	Gm906	ENSMUST00000099521	ENSMUSP00000097121	TRANSLATION	protein_coding	-	CCDS49262.1	1	1017	0	0	0.5	48.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021576	Pdcd6	ENSMUST00000223386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021576	Pdcd6	ENSMUST00000220861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021576	Pdcd6	ENSMUST00000222993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021576	Pdcd6	ENSMUST00000222759	ENSMUSP00000152458	TRANSLATION	protein_coding	-	-	2	189	29	5.25	7.6	58.7	0	-4,-7	-	-	20.688	ALTERNATIVE:1
ENSMUSG00000021576	Pdcd6	ENSMUST00000022060	ENSMUSP00000022060	TRANSLATION	protein_coding	-	CCDS26642.1	1	191	29	5.25	7.6	61.9	0	-4,-7	-	-	21	PRINCIPAL:2
ENSMUSG00000035936	Aldh5a1	ENSMUST00000037615	ENSMUSP00000040591	TRANSLATION	protein_coding	-	CCDS26383.1	1	523	30	9.5	1.5	553.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021356	Irf4	ENSMUST00000021784	ENSMUSP00000021784	TRANSLATION	protein_coding	-	CCDS26419.1	1	450	0	5.93	6.3	362.2	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000021356	Irf4	ENSMUST00000110307	ENSMUSP00000105936	TRANSLATION	protein_coding	-	CCDS84017.1	1	449	0	5.93	6.3	362.2	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000021356	Irf4	ENSMUST00000222125	ENSMUSP00000152134	TRANSLATION	protein_coding	stop	-	2	63	0	1	0	55.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021193	Pitrm1	ENSMUST00000021611	ENSMUSP00000021611	TRANSLATION	protein_coding	-	-	1	997	4	24.6	0	407.4	0	-4,0	-	-	13.024	MINOR
ENSMUSG00000021193	Pitrm1	ENSMUST00000221120	ENSMUSP00000152183	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021193	Pitrm1	ENSMUST00000221431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021193	Pitrm1	ENSMUST00000222061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021193	Pitrm1	ENSMUST00000223492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021193	Pitrm1	ENSMUST00000220454	ENSMUSP00000152176	TRANSLATION	nonsense_mediated_decay	start	-	5	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021193	Pitrm1	ENSMUST00000222485	ENSMUSP00000152229	TRANSLATION	protein_coding	-	CCDS36585.1	1	1036	4	25.6	3.9	423.7	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000021193	Pitrm1	ENSMUST00000221911	ENSMUSP00000152053	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041773	Enc1	ENSMUST00000041623	ENSMUSP00000038783	TRANSLATION	protein_coding	-	CCDS26710.1	1	589	0	0.2	21.5	348.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000033715	Akr1c14	ENSMUST00000118717	ENSMUSP00000112664	TRANSLATION	protein_coding	-	CCDS26218.1	5	323	27	8	2.7	165.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000033715	Akr1c14	ENSMUST00000147180	ENSMUSP00000152562	TRANSLATION	nonsense_mediated_decay	start	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033715	Akr1c14	ENSMUST00000041768	ENSMUSP00000045394	TRANSLATION	protein_coding	-	CCDS26218.1	1	323	27	8	2.7	165.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021615	Xrcc4	ENSMUST00000022115	ENSMUSP00000022115	TRANSLATION	protein_coding	-	CCDS26673.1	1	326	0	4.83	1.5	499.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021615	Xrcc4	ENSMUST00000159199	ENSMUSP00000123934	TRANSLATION	nonsense_mediated_decay	-	-	1	314	0	4.83	0	465	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021615	Xrcc4	ENSMUST00000161396	ENSMUSP00000124573	TRANSLATION	protein_coding	stop	-	3	83	0	2	0	132.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021615	Xrcc4	ENSMUST00000160232	ENSMUSP00000125486	TRANSLATION	protein_coding	stop	-	5	94	0	2.33	0	145.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054931	Zkscan4	ENSMUST00000225845	ENSMUSP00000153278	TRANSLATION	protein_coding	-	-	-	451	28	1.6	0	280.3	0	-4,-5	-	-	14.328	MINOR
ENSMUSG00000054931	Zkscan4	ENSMUST00000062609	ENSMUSP00000054604	TRANSLATION	protein_coding	-	CCDS26277.1	2	480	28	2.35	0.5	309.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041817	Fam169a	ENSMUST00000042517	ENSMUSP00000043738	TRANSLATION	protein_coding	-	CCDS49337.1	1	665	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000041817	Fam169a	ENSMUST00000169863	ENSMUSP00000126209	TRANSLATION	protein_coding	-	CCDS49337.1	1	665	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021669	Col4a3bp	ENSMUST00000221394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021669	Col4a3bp	ENSMUST00000223471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021669	Col4a3bp	ENSMUST00000220464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021669	Col4a3bp	ENSMUST00000077672	ENSMUSP00000076856	TRANSLATION	protein_coding	-	CCDS26705.1	1	624	0	10.985	13.6	165.4	0	-4,-5	-	-	15.25	PRINCIPAL:3
ENSMUSG00000021669	Col4a3bp	ENSMUST00000179226	ENSMUSP00000136766	TRANSLATION	protein_coding	-	CCDS49335.1	1	598	0	11.36	13.6	165.4	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000021669	Col4a3bp	ENSMUST00000109444	ENSMUSP00000105070	TRANSLATION	protein_coding	-	CCDS49335.1	1	598	0	11.36	13.6	165.4	0	-4,-5	-	-	16	ALTERNATIVE:1
ENSMUSG00000021669	Col4a3bp	ENSMUST00000222434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099269	Calm5	ENSMUST00000183198	ENSMUSP00000139172	TRANSLATION	protein_coding	-	-	-	117	15	0.64	0	83.6	0	-4,-5	-	-	9.462	MINOR
ENSMUSG00000099269	Calm5	ENSMUST00000184271	ENSMUSP00000139342	TRANSLATION	protein_coding	-	CCDS59581.1	1	140	20	1.14	0.5	126.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021338	Carmil1	ENSMUST00000125420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021338	Carmil1	ENSMUST00000128416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021338	Carmil1	ENSMUST00000151566	ENSMUSP00000120971	TRANSLATION	protein_coding	start	-	1	173	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021338	Carmil1	ENSMUST00000125901	ENSMUSP00000126522	TRANSLATION	nonsense_mediated_decay	start	-	1	932	0	9.75	0	351.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021338	Carmil1	ENSMUST00000072889	ENSMUSP00000072662	TRANSLATION	protein_coding	-	CCDS36621.1	1	1374	0	22.5	2.7	379.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000021338	Carmil1	ENSMUST00000110398	ENSMUSP00000106028	TRANSLATION	protein_coding	-	CCDS79171.1	1	1332	0	22.5	1.5	379.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021338	Carmil1	ENSMUST00000123076	ENSMUSP00000130100	TRANSLATION	protein_coding	stop	-	3	20	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021338	Carmil1	ENSMUST00000142171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021338	Carmil1	ENSMUST00000147261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021338	Carmil1	ENSMUST00000140042	ENSMUSP00000127121	TRANSLATION	protein_coding	stop	-	3	57	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021338	Carmil1	ENSMUST00000136517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021338	Carmil1	ENSMUST00000144159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032727	Mier3	ENSMUST00000232398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032727	Mier3	ENSMUST00000137268	ENSMUSP00000117483	TRANSLATION	nonsense_mediated_decay	-	-	5	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032727	Mier3	ENSMUST00000232560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032727	Mier3	ENSMUST00000146726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032727	Mier3	ENSMUST00000231979	ENSMUSP00000156206	TRANSLATION	protein_coding	stop	-	-	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032727	Mier3	ENSMUST00000109271	ENSMUSP00000104894	TRANSLATION	protein_coding	start	-	5	549	4	2.955	1.5	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032727	Mier3	ENSMUST00000047412	ENSMUSP00000036809	TRANSLATION	protein_coding	-	-	1	523	4	2.955	1.5	63.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000032727	Mier3	ENSMUST00000231273	ENSMUSP00000155930	TRANSLATION	protein_coding	stop	-	-	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032727	Mier3	ENSMUST00000231713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032727	Mier3	ENSMUST00000109272	ENSMUSP00000104895	TRANSLATION	protein_coding	-	CCDS26770.2	1	551	4	2.955	1.5	63.5	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000032727	Mier3	ENSMUST00000231466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044164	Rnf182	ENSMUST00000059986	ENSMUSP00000062005	TRANSLATION	protein_coding	-	CCDS26480.1	1	247	8	0.4	14.8	29.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044164	Rnf182	ENSMUST00000161817	ENSMUSP00000125601	TRANSLATION	protein_coding	stop	-	3	30	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046016	Olfr1364	ENSMUST00000213912	ENSMUSP00000149964	TRANSLATION	protein_coding	-	CCDS26281.1	5	314	0	0	0.5	164.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046016	Olfr1364	ENSMUST00000206526	ENSMUSP00000145658	TRANSLATION	protein_coding	-	CCDS26281.1	3	314	0	0	0.5	164.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046016	Olfr1364	ENSMUST00000057453	ENSMUSP00000059544	TRANSLATION	protein_coding	-	CCDS26281.1	-	314	0	0	0.5	164.4	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000046016	Olfr1364	ENSMUST00000216898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021196	Pfkp	ENSMUST00000135761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000142372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000131648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000133041	ENSMUSP00000123662	TRANSLATION	nonsense_mediated_decay	start	-	5	82	4	1.76	0	59.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021196	Pfkp	ENSMUST00000137327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000142972	ENSMUSP00000114439	TRANSLATION	protein_coding	start/stop	-	3	183	5	4.125	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021196	Pfkp	ENSMUST00000144053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000021614	ENSMUSP00000021614	TRANSLATION	protein_coding	-	CCDS70427.1	1	784	44	20.16	0.5	691.8	0	-4,-5	-	-	16.674	MINOR
ENSMUSG00000021196	Pfkp	ENSMUST00000151894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000148999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021196	Pfkp	ENSMUST00000136585	ENSMUSP00000115313	TRANSLATION	protein_coding	stop	-	3	167	21	3.5	0	180.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021196	Pfkp	ENSMUST00000154100	ENSMUSP00000116523	TRANSLATION	nonsense_mediated_decay	start	-	5	8	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021196	Pfkp	ENSMUST00000138703	ENSMUSP00000117030	TRANSLATION	protein_coding	-	CCDS26230.1	1	784	45	20.49	0.5	687.8	0	-4,-5	-	-	17.76	PRINCIPAL:1
ENSMUSG00000035910	Dcdc2a	ENSMUST00000160363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035910	Dcdc2a	ENSMUST00000036932	ENSMUSP00000047641	TRANSLATION	protein_coding	-	CCDS56873.1	1	368	0	3.98	0.5	127.2	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000035910	Dcdc2a	ENSMUST00000069614	ENSMUSP00000063650	TRANSLATION	protein_coding	-	CCDS26386.2	1	475	0	3.98	3.9	127.2	0	-4,0	-	-	13	PRINCIPAL:3
ENSMUSG00000035910	Dcdc2a	ENSMUST00000159129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021456	Fbp2	ENSMUST00000021907	ENSMUSP00000021907	TRANSLATION	protein_coding	-	CCDS36698.1	1	339	38	7	21.5	20.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021456	Fbp2	ENSMUST00000222000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021514	Zfp369	ENSMUST00000155732	ENSMUSP00000119796	TRANSLATION	protein_coding	stop	-	3	70	0	1.1	0	67.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021514	Zfp369	ENSMUST00000126879	ENSMUSP00000119114	TRANSLATION	protein_coding	-	CCDS26605.2	1	845	20	1.9	0.5	362.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021514	Zfp369	ENSMUST00000130799	ENSMUSP00000116221	TRANSLATION	protein_coding	-	-	1	382	0	1.7	0	266.5	0	-4,-5	-	-	5.61	MINOR
ENSMUSG00000021514	Zfp369	ENSMUST00000222364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021514	Zfp369	ENSMUST00000125510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021360	Gcnt2	ENSMUST00000069958	ENSMUSP00000070942	TRANSLATION	protein_coding	-	CCDS26468.1	1	401	10	1.62	2.9	193	1	-1,-5	-	-	17.653	PRINCIPAL:5
ENSMUSG00000021360	Gcnt2	ENSMUST00000225759	ENSMUSP00000153207	TRANSLATION	protein_coding	-	-	-	356	9	1.18	0	187.2	1	-1,-5	-	-	14.544	MINOR
ENSMUSG00000021360	Gcnt2	ENSMUST00000067778	ENSMUSP00000066467	TRANSLATION	protein_coding	-	CCDS26469.1	1	401	10	1.78	0.5	196.3	1	-1,-5	-	-	17.778	ALTERNATIVE:2
ENSMUSG00000021360	Gcnt2	ENSMUST00000225996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021360	Gcnt2	ENSMUST00000223570	ENSMUSP00000153363	TRANSLATION	protein_coding	-	-	-	45	0	0.38	0	0	0	-4,-6	-	-	1.278	MINOR
ENSMUSG00000021360	Gcnt2	ENSMUST00000110191	ENSMUSP00000105820	TRANSLATION	protein_coding	-	CCDS36637.1	1	401	9	1.78	4.1	200	1	-2,-5	-	-	18.334	ALTERNATIVE:2
ENSMUSG00000021431	Snrnp48	ENSMUST00000223557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021431	Snrnp48	ENSMUST00000178564	ENSMUSP00000136202	TRANSLATION	protein_coding	-	-	5	274	5	1	0	38.6	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000021431	Snrnp48	ENSMUST00000223893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021431	Snrnp48	ENSMUST00000223680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021431	Snrnp48	ENSMUST00000223814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021431	Snrnp48	ENSMUST00000224192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021431	Snrnp48	ENSMUST00000091641	ENSMUSP00000089230	TRANSLATION	protein_coding	-	CCDS36635.1	1	337	5	1	3.9	38.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000069292	Vmn1r199	ENSMUST00000227685	ENSMUSP00000153918	TRANSLATION	protein_coding	-	CCDS26317.1	-	367	0	0	0.5	110.4	5	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000069292	Vmn1r199	ENSMUST00000091732	ENSMUSP00000089326	TRANSLATION	protein_coding	-	CCDS26317.1	-	367	0	0	0.5	110.4	5	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000069292	Vmn1r199	ENSMUST00000227689	ENSMUSP00000154112	TRANSLATION	protein_coding	-	-	-	324	0	0	0	110.4	5	0,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000069292	Vmn1r199	ENSMUST00000227846	ENSMUSP00000153996	TRANSLATION	protein_coding	-	-	-	324	0	0	0	110.4	5	0,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000052374	Actn2	ENSMUST00000222034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052374	Actn2	ENSMUST00000221162	ENSMUSP00000152121	TRANSLATION	protein_coding	start/stop	-	5	192	0	4.08	0	63.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052374	Actn2	ENSMUST00000110616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052374	Actn2	ENSMUST00000064204	ENSMUSP00000067708	TRANSLATION	protein_coding	-	CCDS26239.1	1	894	7	20.33	15.3	530.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052374	Actn2	ENSMUST00000168193	ENSMUSP00000129609	TRANSLATION	protein_coding	-	CCDS26239.1	5	894	7	20.33	15.3	530.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000045273	Cenph	ENSMUST00000075550	ENSMUSP00000074988	TRANSLATION	protein_coding	-	CCDS26738.1	1	241	0	0	0.5	89.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045273	Cenph	ENSMUST00000136694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055228	Zfp935	ENSMUST00000076195	ENSMUSP00000075552	TRANSLATION	protein_coding,RT	-	-	1	150	0	1	0.5	78.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021639	Gtf2h2	ENSMUST00000134842	ENSMUSP00000138748	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	3.5	0	86.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021639	Gtf2h2	ENSMUST00000231227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021639	Gtf2h2	ENSMUST00000066984	ENSMUSP00000065228	TRANSLATION	protein_coding	-	CCDS26730.1	1	396	14	11.83	13	361.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021639	Gtf2h2	ENSMUST00000232450	ENSMUSP00000156100	TRANSLATION	protein_coding	start	-	-	120	14	3.5	0	42.3	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000021639	Gtf2h2	ENSMUST00000124698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000145266	ENSMUSP00000138108	TRANSLATION	nonsense_mediated_decay	-	-	1	398	14	11.83	10.8	361.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021639	Gtf2h2	ENSMUST00000124644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000142182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000232447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000066940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000152049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021639	Gtf2h2	ENSMUST00000147229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021675	F2rl2	ENSMUST00000022182	ENSMUSP00000022182	TRANSLATION	protein_coding	-	CCDS26702.1	1	369	0	0.6	0.5	133.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000076754	Trgv2	ENSMUST00000103563	ENSMUSP00000100341	TRANSLATION	TR_V_gene	stop	-	-	116	0	1	0	56.6	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000074794	Arrdc3	ENSMUST00000159856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074794	Arrdc3	ENSMUST00000099356	ENSMUSP00000096957	TRANSLATION	protein_coding	-	CCDS36736.1	1	414	0	5.89	17	187.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000074794	Arrdc3	ENSMUST00000161441	ENSMUSP00000125455	TRANSLATION	protein_coding	-	-	1	194	0	1.64	8.2	33.1	0	-4,-5	-	-	1.8	MINOR
ENSMUSG00000074794	Arrdc3	ENSMUST00000159690	ENSMUSP00000124418	TRANSLATION	nonsense_mediated_decay	-	-	1	365	0	5.89	1.2	187.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074794	Arrdc3	ENSMUST00000159090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074794	Arrdc3	ENSMUST00000162904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000100622	Gm20379	ENSMUST00000188317	ENSMUSP00000140453	TRANSLATION	protein_coding	start	-	-	119	0	0	0	74.4	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000096537	Fam240b	ENSMUST00000180282	ENSMUSP00000136210	TRANSLATION	protein_coding	-	CCDS56887.1	1	78	0	0	3.8	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000021500	Ddx46	ENSMUST00000231097	ENSMUSP00000155176	TRANSLATION	protein_coding	start/stop	-	-	144	0	0.88	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021500	Ddx46	ENSMUST00000099479	ENSMUSP00000097078	TRANSLATION	protein_coding	-	-	5	1028	12	8.45	0	213.9	0	-4,-6	-	-	13.146	MINOR
ENSMUSG00000021500	Ddx46	ENSMUST00000172272	ENSMUSP00000133245	TRANSLATION	protein_coding	-	CCDS70464.1	5	1032	14	8.78	7.6	261.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021500	Ddx46	ENSMUST00000224551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021500	Ddx46	ENSMUST00000223736	ENSMUSP00000153328	TRANSLATION	protein_coding	-	CCDS70464.1	-	1032	14	8.78	7.6	261.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000057762	Gm6169	ENSMUST00000071118	ENSMUSP00000132645	TRANSLATION	protein_coding	-	-	-	152	0	0	5.1	45.5	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000057554	Lgals8	ENSMUST00000099820	ENSMUSP00000097408	TRANSLATION	protein_coding	-	CCDS36592.1	1	316	16	8.08	7.5	248.8	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000057554	Lgals8	ENSMUST00000135166	ENSMUSP00000120210	TRANSLATION	protein_coding	-	CCDS70430.1	1	223	8	5.58	0.5	168.9	0	-4,-6	-	-	2.478	MINOR
ENSMUSG00000057554	Lgals8	ENSMUST00000152478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057554	Lgals8	ENSMUST00000124888	ENSMUSP00000115094	TRANSLATION	protein_coding	-	CCDS36592.1	1	316	16	8.08	7.5	248.8	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000057554	Lgals8	ENSMUST00000099821	ENSMUSP00000097409	TRANSLATION	protein_coding	-	CCDS36592.1	1	316	16	8.08	7.5	248.8	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000057554	Lgals8	ENSMUST00000135060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057554	Lgals8	ENSMUST00000133143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057554	Lgals8	ENSMUST00000143693	ENSMUSP00000118925	TRANSLATION	protein_coding	-	CCDS70430.1	1	223	8	5.58	0.5	168.9	0	-4,-6	-	-	2.478	MINOR
ENSMUSG00000057554	Lgals8	ENSMUST00000155871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057554	Lgals8	ENSMUST00000144283	ENSMUSP00000114200	TRANSLATION	protein_coding	-	CCDS70431.1	5	325	16	8.278	0.5	248.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000171034	ENSMUSP00000132433	TRANSLATION	protein_coding	stop	-	5	228	0	6.3	0	242.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000167237	ENSMUSP00000128267	TRANSLATION	protein_coding	stop	-	3	18	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000171951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060147	Serpinb6a	ENSMUST00000164627	ENSMUSP00000127224	TRANSLATION	protein_coding	stop	-	2	144	0	4.05	0	134.7	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000167163	ENSMUSP00000131115	TRANSLATION	protein_coding	-	CCDS26441.1	5	378	0	7.8	5.1	431.7	2	-4,-6	-	-	13.802	PRINCIPAL:1
ENSMUSG00000060147	Serpinb6a	ENSMUST00000170991	ENSMUSP00000131900	TRANSLATION	protein_coding	stop	-	3	72	0	1.8	0	58.6	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000167260	ENSMUSP00000127768	TRANSLATION	protein_coding	stop	-	5	193	0	5.3	0	213.5	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000043552	ENSMUSP00000041016	TRANSLATION	protein_coding	-	CCDS26441.1	1	378	0	7.8	5.1	431.7	2	-4,-6	-	-	13.802	PRINCIPAL:1
ENSMUSG00000060147	Serpinb6a	ENSMUST00000166354	ENSMUSP00000126287	TRANSLATION	protein_coding	stop	-	2	68	0	1.9	0	58.6	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000171985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060147	Serpinb6a	ENSMUST00000167597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060147	Serpinb6a	ENSMUST00000168400	ENSMUSP00000126450	TRANSLATION	protein_coding	stop	-	5	120	0	3.3	0	99.9	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000017188	ENSMUSP00000017188	TRANSLATION	protein_coding	-	CCDS49228.1	1	399	0	7.9	1.5	431.7	2	-4,-2	-	-	12.244	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000171252	ENSMUSP00000126162	TRANSLATION	protein_coding	stop	-	5	187	0	5.3	0	206.4	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000060147	Serpinb6a	ENSMUST00000076532	ENSMUSP00000075848	TRANSLATION	protein_coding	-	CCDS26441.1	5	378	0	7.8	5.1	431.7	2	-4,-6	-	-	13.802	PRINCIPAL:1
ENSMUSG00000060147	Serpinb6a	ENSMUST00000170620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060147	Serpinb6a	ENSMUST00000168350	ENSMUSP00000130356	TRANSLATION	protein_coding	stop	-	3	162	0	4.55	0	155.5	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000038982	Bloc1s5	ENSMUST00000224902	ENSMUSP00000153368	TRANSLATION	protein_coding	-	-	-	169	0	0	0	124	0	-4,-5	-	-	2.922	MINOR
ENSMUSG00000038982	Bloc1s5	ENSMUST00000035899	ENSMUSP00000036614	TRANSLATION	protein_coding	-	CCDS26464.1	1	185	0	0	3.9	175.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000038982	Bloc1s5	ENSMUST00000224115	ENSMUSP00000153650	TRANSLATION	protein_coding	-	-	-	149	0	0	0	124	0	-4,-5	-	-	2.922	MINOR
ENSMUSG00000021149	Gtpbp4	ENSMUST00000220546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021149	Gtpbp4	ENSMUST00000021574	ENSMUSP00000021574	TRANSLATION	nonsense_mediated_decay	-	-	1	164	7	3.4	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021149	Gtpbp4	ENSMUST00000222975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021149	Gtpbp4	ENSMUST00000222098	ENSMUSP00000152412	TRANSLATION	protein_coding	-	CCDS26236.1	1	634	14	6.24	17.3	204.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000021149	Gtpbp4	ENSMUST00000221534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000168367	ENSMUSP00000127466	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000224194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000165129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000172118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000166923	ENSMUSP00000128097	TRANSLATION	protein_coding	stop	-	5	236	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000172166	ENSMUSP00000132674	TRANSLATION	protein_coding	start/stop	-	3	213	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000163395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000165253	ENSMUSP00000129049	TRANSLATION	protein_coding	start/stop	-	3	147	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000164011	ENSMUSP00000127270	TRANSLATION	nonsense_mediated_decay	start	-	5	152	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000168242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000172419	ENSMUSP00000126079	TRANSLATION	protein_coding	start/stop	-	5	402	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021555	Naa35	ENSMUST00000168633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000165841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021555	Naa35	ENSMUST00000171391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000022038	ENSMUSP00000022038	TRANSLATION	protein_coding	-	CCDS26575.1	1	725	0	0	15.7	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000021555	Naa35	ENSMUST00000163521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021555	Naa35	ENSMUST00000225670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094637	Vmn1r204	ENSMUST00000228195	ENSMUSP00000154519	TRANSLATION	protein_coding	-	CCDS36615.1	-	302	0	0	0.5	134.3	4	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000094637	Vmn1r204	ENSMUST00000091728	ENSMUSP00000089321	TRANSLATION	protein_coding	-	CCDS36615.1	-	302	0	0	0.5	134.3	4	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000059839	Zfp874b	ENSMUST00000224308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059839	Zfp874b	ENSMUST00000223868	ENSMUSP00000153242	TRANSLATION	protein_coding	stop	-	-	176	6	0.8	0	90.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059839	Zfp874b	ENSMUST00000019572	ENSMUSP00000019572	TRANSLATION	protein_coding	-	CCDS49302.1	3	447	43	1.6	0.5	265.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059839	Zfp874b	ENSMUST00000225027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059839	Zfp874b	ENSMUST00000223711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114432	Gm49391	ENSMUST00000225167	ENSMUSP00000153401	TRANSLATION	protein_coding,RT	-	-	-	136	0	2.08	0.5	55.3	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000114432	Gm49391	ENSMUST00000225802	ENSMUSP00000153043	TRANSLATION	nonsense_mediated_decay,RT	start	-	-	28	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000114432	Gm49391	ENSMUST00000225859	ENSMUSP00000153232	TRANSLATION	protein_coding,RT	-	-	-	136	0	2.08	0.5	54.8	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000109228	Fam81b	ENSMUST00000208418	ENSMUSP00000146649	TRANSLATION	protein_coding	-	-	5	432	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000109228	Fam81b	ENSMUST00000208586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043190	Rfesd	ENSMUST00000179078	ENSMUSP00000136314	TRANSLATION	protein_coding	-	CCDS26654.1	1	157	10	2.33	6.3	40	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043190	Rfesd	ENSMUST00000167271	ENSMUSP00000130366	TRANSLATION	protein_coding	-	CCDS26654.1	2	157	10	2.33	6.3	40	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043190	Rfesd	ENSMUST00000050997	ENSMUSP00000055763	TRANSLATION	protein_coding	-	CCDS26654.1	1	157	10	2.33	6.3	40	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000043190	Rfesd	ENSMUST00000224093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058569	Tmed9	ENSMUST00000225888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058569	Tmed9	ENSMUST00000224634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058569	Tmed9	ENSMUST00000224741	ENSMUSP00000153554	TRANSLATION	protein_coding	-	-	-	209	0	0	0	156.1	1	-4,-7	-	-	4.272	MINOR
ENSMUSG00000058569	Tmed9	ENSMUST00000109905	ENSMUSP00000105531	TRANSLATION	protein_coding	-	CCDS49277.1	1	235	0	0	7.5	184.9	1	3,2	-	-	9	PRINCIPAL:1
ENSMUSG00000058569	Tmed9	ENSMUST00000225723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021337	Scgn	ENSMUST00000021770	ENSMUSP00000021770	TRANSLATION	protein_coding	-	CCDS26375.1	1	276	14	7.85	6.3	68.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000021337	Scgn	ENSMUST00000142826	ENSMUSP00000153251	TRANSLATION	protein_coding	-	-	5	119	9	3.5	0	32.4	0	-4,-5	-	-	5.496	MINOR
ENSMUSG00000021337	Scgn	ENSMUST00000226031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021357	Exoc2	ENSMUST00000220490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021357	Exoc2	ENSMUST00000222133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021357	Exoc2	ENSMUST00000221678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021357	Exoc2	ENSMUST00000021785	ENSMUSP00000021785	TRANSLATION	protein_coding	-	CCDS26420.1	1	924	0	2	13.5	219.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021357	Exoc2	ENSMUST00000102946	ENSMUSP00000100010	TRANSLATION	protein_coding	-	CCDS26420.1	1	924	0	2	13.5	219.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021357	Exoc2	ENSMUST00000220532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021357	Exoc2	ENSMUST00000223216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021640	Naip1	ENSMUST00000022142	ENSMUSP00000022142	TRANSLATION	protein_coding	-	CCDS26729.1	1	1403	20	6.71	0.5	308.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021640	Naip1	ENSMUST00000222155	ENSMUSP00000152583	TRANSLATION	protein_coding	-	CCDS26729.1	1	1403	20	6.71	0.5	308.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021640	Naip1	ENSMUST00000221943	ENSMUSP00000152120	TRANSLATION	nonsense_mediated_decay	-	-	1	388	12	4.25	0	194.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021640	Naip1	ENSMUST00000221727	ENSMUSP00000152253	TRANSLATION	protein_coding	-	-	1	401	12	4.1	0	194.4	0	-4,-5	-	-	1.446	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000224397	ENSMUSP00000153569	TRANSLATION	protein_coding	start	-	-	226	9	1.26	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000168821	ENSMUSP00000127460	TRANSLATION	protein_coding	-	-	1	99	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000169745	ENSMUSP00000132854	TRANSLATION	nonsense_mediated_decay	-	-	1	246	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000163284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021557	Agtpbp1	ENSMUST00000170520	ENSMUSP00000130037	TRANSLATION	protein_coding	stop	-	5	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000166585	ENSMUSP00000129686	TRANSLATION	protein_coding	stop	-	5	103	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000022040	ENSMUSP00000022040	TRANSLATION	protein_coding	-	CCDS36686.1	1	1218	11	3.465	1.5	44.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000021557	Agtpbp1	ENSMUST00000169434	ENSMUSP00000131322	TRANSLATION	protein_coding	stop	-	2	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000164215	ENSMUSP00000130939	TRANSLATION	protein_coding	-	CCDS70470.1	1	1174	11	3.465	0.5	44.4	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000021557	Agtpbp1	ENSMUST00000170555	ENSMUSP00000128589	TRANSLATION	nonsense_mediated_decay	-	-	2	795	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000225133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021557	Agtpbp1	ENSMUST00000171606	ENSMUSP00000132697	TRANSLATION	protein_coding	-	CCDS36687.1	1	789	0	1.25	0.5	0	0	-4,-7	-	-	1.572	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000168141	ENSMUSP00000153638	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000163149	ENSMUSP00000126238	TRANSLATION	protein_coding	start	-	5	685	0	1.25	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000166276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021557	Agtpbp1	ENSMUST00000165477	ENSMUSP00000127600	TRANSLATION	nonsense_mediated_decay	-	-	2	246	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000167096	ENSMUSP00000130030	TRANSLATION	protein_coding	-	-	1	99	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000165370	ENSMUSP00000131627	TRANSLATION	protein_coding	stop	-	3	332	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000165851	ENSMUSP00000153032	TRANSLATION	nonsense_mediated_decay	start	-	2	33	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000151827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021557	Agtpbp1	ENSMUST00000170378	ENSMUSP00000128552	TRANSLATION	protein_coding	-	-	3	99	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000109830	ENSMUSP00000105456	TRANSLATION	protein_coding	-	CCDS36687.1	1	789	0	1.25	0.5	0	0	-4,-7	-	-	1.572	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000165598	ENSMUSP00000129846	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021557	Agtpbp1	ENSMUST00000167593	ENSMUSP00000129135	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052727	Map1b	ENSMUST00000064762	ENSMUSP00000068374	TRANSLATION	protein_coding	-	CCDS26723.1	1	2464	0	0	0.5	154.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052727	Map1b	ENSMUST00000223693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052727	Map1b	ENSMUST00000223820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052727	Map1b	ENSMUST00000224605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052727	Map1b	ENSMUST00000224702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052727	Map1b	ENSMUST00000223725	ENSMUSP00000153390	TRANSLATION	protein_coding	-	-	-	61	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000045312	Lhfpl2	ENSMUST00000120051	ENSMUSP00000113786	TRANSLATION	protein_coding	stop	-	5	34	0	0	0	28	1	2,-3	-	-	-1	MINOR
ENSMUSG00000045312	Lhfpl2	ENSMUST00000054274	ENSMUSP00000062239	TRANSLATION	protein_coding	-	CCDS26692.1	1	222	0	0	1.5	190.7	5	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000045312	Lhfpl2	ENSMUST00000121618	ENSMUSP00000113468	TRANSLATION	protein_coding	-	CCDS26692.1	1	222	0	0	1.5	190.7	5	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000045312	Lhfpl2	ENSMUST00000131595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045312	Lhfpl2	ENSMUST00000221096	ENSMUSP00000152453	TRANSLATION	protein_coding	stop	-	3	19	0	0	0	0	0	-2,-7	-	-	-1	MINOR
ENSMUSG00000045312	Lhfpl2	ENSMUST00000144838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045312	Lhfpl2	ENSMUST00000223423	ENSMUSP00000152241	TRANSLATION	protein_coding	stop	-	3	141	0	0	0	114.6	3	2,-3	-	-	-1	MINOR
ENSMUSG00000045312	Lhfpl2	ENSMUST00000118195	ENSMUSP00000112655	TRANSLATION	protein_coding	-	CCDS26692.1	1	222	0	0	1.5	190.7	5	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000045312	Lhfpl2	ENSMUST00000156071	ENSMUSP00000117113	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	114	3	2,-3	-	-	-1	MINOR
ENSMUSG00000038891	Prl3b1	ENSMUST00000035273	ENSMUSP00000047680	TRANSLATION	protein_coding	-	CCDS26393.1	1	222	0	3.264	1.5	181.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038891	Prl3b1	ENSMUST00000225089	ENSMUSP00000153139	TRANSLATION	protein_coding	stop	-	-	150	0	2	0	109	0	0,-3	-	-	-1	MINOR
ENSMUSG00000071516	H2ac13	ENSMUST00000070124	ENSMUSP00000088285	TRANSLATION	protein_coding	-	CCDS26288.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021685	Otp	ENSMUST00000022195	ENSMUSP00000022195	TRANSLATION	protein_coding	-	CCDS26695.1	1	325	0	0.6	9.6	117.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021685	Otp	ENSMUST00000184985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033102	Cdc14b	ENSMUST00000221788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033102	Cdc14b	ENSMUST00000221139	ENSMUSP00000152843	TRANSLATION	nonsense_mediated_decay	-	-	1	485	13	9.9	4.1	236	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033102	Cdc14b	ENSMUST00000039318	ENSMUSP00000046003	TRANSLATION	protein_coding	-	CCDS26598.1	1	485	13	9.9	4.1	236	0	-4,0	-	-	18.912	PRINCIPAL:3
ENSMUSG00000033102	Cdc14b	ENSMUST00000221217	ENSMUSP00000152736	TRANSLATION	nonsense_mediated_decay	start	-	3	63	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033102	Cdc14b	ENSMUST00000109770	ENSMUSP00000105392	TRANSLATION	protein_coding	-	CCDS26598.1	1	485	13	9.9	4.1	236	0	-4,0	-	-	18.912	PRINCIPAL:3
ENSMUSG00000033102	Cdc14b	ENSMUST00000221634	ENSMUSP00000152388	TRANSLATION	protein_coding	-	-	1	492	13	9.9	0	236	0	-4,0	-	-	17.784	MINOR
ENSMUSG00000033102	Cdc14b	ENSMUST00000223116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033102	Cdc14b	ENSMUST00000221437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033102	Cdc14b	ENSMUST00000109769	ENSMUSP00000105391	TRANSLATION	protein_coding	-	CCDS49292.1	1	448	13	9.6	6.5	239.6	0	-4,-7	-	-	19.4	ALTERNATIVE:1
ENSMUSG00000033102	Cdc14b	ENSMUST00000222766	ENSMUSP00000152870	TRANSLATION	protein_coding	start	-	3	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033102	Cdc14b	ENSMUST00000222713	ENSMUSP00000152246	TRANSLATION	protein_coding	start	-	3	153	1	1.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000095125	Vmn1r198	ENSMUST00000226909	ENSMUSP00000153942	TRANSLATION	protein_coding	-	CCDS26316.1	-	300	0	0	0.5	128.9	4	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095125	Vmn1r198	ENSMUST00000227167	ENSMUSP00000154434	TRANSLATION	protein_coding	-	-	-	211	0	0	0	106	3	4,-1	-	-	4.626	MINOR
ENSMUSG00000095125	Vmn1r198	ENSMUST00000091733	ENSMUSP00000089327	TRANSLATION	protein_coding	-	CCDS26316.1	-	300	0	0	0.5	128.9	4	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095125	Vmn1r198	ENSMUST00000226786	ENSMUSP00000154486	TRANSLATION	protein_coding	-	CCDS26316.1	-	300	0	0	0.5	128.9	4	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000037851	Iars	ENSMUST00000164260	ENSMUSP00000126806	TRANSLATION	protein_coding	-	CCDS36659.1	5	1262	5	15.785	6.3	890.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037851	Iars	ENSMUST00000165063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037851	Iars	ENSMUST00000172254	ENSMUSP00000130058	TRANSLATION	protein_coding	stop	-	2	92	2	1.8	0	104.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037851	Iars	ENSMUST00000047363	ENSMUSP00000048096	TRANSLATION	protein_coding	-	-	5	1262	5	15.785	6.3	890.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037851	Iars	ENSMUST00000164275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037851	Iars	ENSMUST00000171510	ENSMUSP00000130204	TRANSLATION	nonsense_mediated_decay	start	-	3	96	0	1.9	0	89.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037851	Iars	ENSMUST00000165270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037851	Iars	ENSMUST00000165316	ENSMUSP00000132082	TRANSLATION	protein_coding	-	CCDS36659.1	1	1262	5	15.785	6.3	890.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000037851	Iars	ENSMUST00000165656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021763	BC067074	ENSMUST00000078163	ENSMUSP00000077297	TRANSLATION	protein_coding	start	-	5	823	7	0	0	240.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021763	BC067074	ENSMUST00000136755	ENSMUSP00000119993	TRANSLATION	protein_coding	-	-	5	2391	11	0.64	0	859.1	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021763	BC067074	ENSMUST00000135096	ENSMUSP00000131959	TRANSLATION	protein_coding	start	-	1	158	0	0	0	37.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012429	Mplkip	ENSMUST00000049744	ENSMUSP00000059154	TRANSLATION	protein_coding	-	CCDS26253.1	1	178	0	0	2.7	76.7	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000012429	Mplkip	ENSMUST00000221480	ENSMUSP00000152130	TRANSLATION	protein_coding	-	-	5	48	0	0	0	73.4	0	-4,-5	-	-	5.742	ALTERNATIVE:2
ENSMUSG00000012429	Mplkip	ENSMUST00000222292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021504	B4galt7	ENSMUST00000100764	ENSMUSP00000098327	TRANSLATION	protein_coding	-	CCDS79190.1	1	292	14	3.75	0.5	167.9	1	-4,0	-	-	14.016	MINOR
ENSMUSG00000021504	B4galt7	ENSMUST00000133176	ENSMUSP00000123292	TRANSLATION	protein_coding	stop	-	3	220	16	3.75	0	178.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021504	B4galt7	ENSMUST00000064701	ENSMUSP00000068532	TRANSLATION	protein_coding	-	CCDS26550.1	1	327	16	4.75	5.1	178.8	1	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000021504	B4galt7	ENSMUST00000142654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030446	Zfp273	ENSMUST00000181391	ENSMUSP00000137903	TRANSLATION	protein_coding	-	CCDS49305.1	1	501	60	1.9	0.5	383.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000030446	Zfp273	ENSMUST00000012725	ENSMUSP00000012725	TRANSLATION	protein_coding	-	-	1	468	60	1.1	0	314.3	0	-4,-7	-	-	11.322	MINOR
ENSMUSG00000030446	Zfp273	ENSMUST00000181246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051098	Mblac2	ENSMUST00000057598	ENSMUSP00000051644	TRANSLATION	protein_coding	-	CCDS26662.1	1	279	7	1.26	7.6	73	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000051098	Mblac2	ENSMUST00000224299	ENSMUSP00000152971	TRANSLATION	protein_coding	start	-	-	99	4	0	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021731	Mrps30	ENSMUST00000022245	ENSMUSP00000022245	TRANSLATION	protein_coding	-	CCDS26794.1	1	442	0	5	1.5	589.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000021731	Mrps30	ENSMUST00000225170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000114456	H2bc9	ENSMUST00000224359	ENSMUSP00000153277	TRANSLATION	protein_coding	-	CCDS26343.1	-	126	0	1	7.5	89.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006611	Hfe	ENSMUST00000006787	ENSMUSP00000006787	TRANSLATION	protein_coding	-	-	5	171	0	2.77	1	52.1	2	2,-2	-	-	1.998	MINOR
ENSMUSG00000006611	Hfe	ENSMUST00000091706	ENSMUSP00000089298	TRANSLATION	protein_coding	-	CCDS26360.1	1	359	0	4.77	1.5	201	2	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000006611	Hfe	ENSMUST00000151243	ENSMUSP00000116569	TRANSLATION	protein_coding	start	-	1	35	0	0.67	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000006611	Hfe	ENSMUST00000091707	ENSMUSP00000089299	TRANSLATION	protein_coding	-	CCDS84012.1	5	271	0	3.77	1.5	132.7	2	2,-2	-	-	5.904	MINOR
ENSMUSG00000047547	Cltb	ENSMUST00000140142	ENSMUSP00000122336	TRANSLATION	protein_coding	start	-	5	123	0	2	0	72.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047547	Cltb	ENSMUST00000091609	ENSMUSP00000089198	TRANSLATION	protein_coding	-	CCDS26533.1	1	211	0	3.35	7.5	196.7	0	-4,-5	-	-	13.998	PRINCIPAL:3
ENSMUSG00000047547	Cltb	ENSMUST00000146301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047547	Cltb	ENSMUST00000049575	ENSMUSP00000053371	TRANSLATION	protein_coding	-	CCDS84024.1	1	229	0	3.85	7.5	189.7	0	-4,-5	-	-	14.58	ALTERNATIVE:1
ENSMUSG00000045509	Gpr150	ENSMUST00000056130	ENSMUSP00000049592	TRANSLATION	protein_coding	-	CCDS26655.1	-	427	0	0.24	1.5	74.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021373	Cap2	ENSMUST00000021802	ENSMUSP00000021802	TRANSLATION	protein_coding	-	CCDS26484.1	1	476	0	8.03	6.4	600.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021373	Cap2	ENSMUST00000126687	ENSMUSP00000153072	TRANSLATION	nonsense_mediated_decay	start	-	3	28	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021373	Cap2	ENSMUST00000225824	ENSMUSP00000153125	TRANSLATION	protein_coding	-	-	-	421	0	7.73	0	567.1	0	-4,-5	-	-	9.408	MINOR
ENSMUSG00000021373	Cap2	ENSMUST00000119341	ENSMUSP00000112952	TRANSLATION	protein_coding	-	-	1	364	0	5.28	1.2	368.2	0	-4,-5	-	-	0.572	MINOR
ENSMUSG00000021373	Cap2	ENSMUST00000225444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021501	Caml	ENSMUST00000165154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021501	Caml	ENSMUST00000169228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021501	Caml	ENSMUST00000021963	ENSMUSP00000021963	TRANSLATION	protein_coding	-	CCDS26551.1	1	294	0	0	2.7	462.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017922	Prl3c1	ENSMUST00000018066	ENSMUSP00000018066	TRANSLATION	protein_coding	-	CCDS26392.1	1	212	0	1.77	1.5	102.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000017922	Prl3c1	ENSMUST00000110364	ENSMUSP00000105993	TRANSLATION	protein_coding	-	CCDS49223.1	1	192	0	1.77	0.5	99.4	0	-4,-6	-	-	11.826	MINOR
ENSMUSG00000017922	Prl3c1	ENSMUST00000178072	ENSMUSP00000136890	TRANSLATION	protein_coding	-	CCDS49223.1	5	192	0	1.77	0.5	99.4	0	-4,-6	-	-	11.826	MINOR
ENSMUSG00000021404	Serpinb9c	ENSMUST00000021837	ENSMUSP00000021837	TRANSLATION	protein_coding	-	CCDS49226.1	1	387	0	6.598	0.5	400.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021404	Serpinb9c	ENSMUST00000135897	ENSMUSP00000116267	TRANSLATION	protein_coding	stop	-	3	88	0	1.8	0	63.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021404	Serpinb9c	ENSMUST00000110284	ENSMUSP00000105913	TRANSLATION	protein_coding	-	CCDS36629.1	1	359	0	5.8	0.5	387.5	0	-4,-7	-	-	9.6	MINOR
ENSMUSG00000069280	Vmn1r223	ENSMUST00000235331	ENSMUSP00000157467	TRANSLATION	protein_coding	-	CCDS36618.1	-	361	0	0	0.5	130.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069280	Vmn1r223	ENSMUST00000238002	ENSMUSP00000158015	TRANSLATION	protein_coding	-	CCDS36618.1	-	361	0	0	0.5	130.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069280	Vmn1r223	ENSMUST00000091719	ENSMUSP00000089312	TRANSLATION	protein_coding	-	CCDS36618.1	-	361	0	0	0.5	130.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069280	Vmn1r223	ENSMUST00000236495	ENSMUSP00000158339	TRANSLATION	protein_coding	-	CCDS36618.1	-	361	0	0	0.5	130.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000058385	H2bc8	ENSMUST00000079251	ENSMUSP00000078239	TRANSLATION	protein_coding	-	CCDS26349.1	-	126	0	1	7.5	91.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021707	Dhfr	ENSMUST00000022218	ENSMUSP00000022218	TRANSLATION	protein_coding	-	CCDS26680.1	1	187	35	5	9.6	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000008859	Rala	ENSMUST00000009003	ENSMUSP00000009003	TRANSLATION	protein_coding	-	CCDS26255.1	1	206	20	4.75	19.5	188.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000008859	Rala	ENSMUST00000223147	ENSMUSP00000152365	TRANSLATION	protein_coding	stop	-	5	137	17	2.75	0	142.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021361	Tmem14c	ENSMUST00000021790	ENSMUSP00000021790	TRANSLATION	protein_coding	-	CCDS26470.1	1	114	0	3.066	7.5	100.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094942	Gm3604	ENSMUST00000202194	ENSMUSP00000144048	TRANSLATION	protein_coding	-	-	3	122	0	1	0	79.9	0	-4,-5	-	-	2.664	MINOR
ENSMUSG00000094942	Gm3604	ENSMUST00000187656	ENSMUSP00000139845	TRANSLATION	protein_coding	-	CCDS79201.1	1	559	59	2.25	0.5	394	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094942	Gm3604	ENSMUST00000107989	ENSMUSP00000103623	TRANSLATION	protein_coding	start	-	5	558	59	2.25	0.5	394	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075054	Yae1d1	ENSMUST00000222308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075054	Yae1d1	ENSMUST00000222796	ENSMUSP00000152693	TRANSLATION	protein_coding	-	-	5	78	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075054	Yae1d1	ENSMUST00000222595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075054	Yae1d1	ENSMUST00000099735	ENSMUSP00000097324	TRANSLATION	protein_coding	-	CCDS26256.1	1	216	0	0	0.5	46.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048978	Nrsn1	ENSMUST00000167305	ENSMUSP00000128979	TRANSLATION	protein_coding	-	CCDS26387.1	1	196	0	0	11.6	170.5	2	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000048978	Nrsn1	ENSMUST00000156448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048978	Nrsn1	ENSMUST00000057866	ENSMUSP00000055048	TRANSLATION	protein_coding	-	CCDS26387.1	1	196	0	0	11.6	170.5	2	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000048978	Nrsn1	ENSMUST00000126348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048978	Nrsn1	ENSMUST00000226054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034789	Rab24	ENSMUST00000225289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034789	Rab24	ENSMUST00000224936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034789	Rab24	ENSMUST00000224685	ENSMUSP00000153246	TRANSLATION	protein_coding	start	-	-	116	3	0.95	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034789	Rab24	ENSMUST00000223672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034789	Rab24	ENSMUST00000035242	ENSMUSP00000046188	TRANSLATION	protein_coding	-	CCDS26541.1	1	203	18	5.28	17.3	153	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000021411	Pxdc1	ENSMUST00000053459	ENSMUSP00000051246	TRANSLATION	protein_coding	-	CCDS36632.1	1	231	0	1.33	15.8	24	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021411	Pxdc1	ENSMUST00000152392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021411	Pxdc1	ENSMUST00000125037	ENSMUSP00000117791	TRANSLATION	nonsense_mediated_decay	-	-	1	118	0	0.73	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021411	Pxdc1	ENSMUST00000021847	ENSMUSP00000021847	TRANSLATION	nonsense_mediated_decay	-	-	1	224	0	1.33	0	24	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057446	Cts8	ENSMUST00000021891	ENSMUSP00000021891	TRANSLATION	protein_coding	-	CCDS26587.1	1	333	4	6.6	1.5	301.8	0	1,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021539	Lect2	ENSMUST00000062806	ENSMUSP00000060495	TRANSLATION	protein_coding	-	CCDS26564.1	1	151	3	3.33	6.4	26.3	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000021539	Lect2	ENSMUST00000225183	ENSMUSP00000153699	TRANSLATION	protein_coding	-	-	-	132	2	2	0	0	0	4,-1	-	-	5.343	MINOR
ENSMUSG00000041431	Ccnb1	ENSMUST00000128279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041431	Ccnb1	ENSMUST00000174038	ENSMUSP00000133962	TRANSLATION	protein_coding	-	-	5	393	0	4.6	0	220.3	0	-4,-2	-	-	7.356	MINOR
ENSMUSG00000041431	Ccnb1	ENSMUST00000142056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041431	Ccnb1	ENSMUST00000091295	ENSMUSP00000088841	TRANSLATION	protein_coding	-	-	1	369	0	5	0	254.6	0	-4,-2	-	-	10.212	MINOR
ENSMUSG00000041431	Ccnb1	ENSMUST00000072119	ENSMUSP00000071989	TRANSLATION	protein_coding	-	CCDS36768.1	1	430	0	5.6	0.5	264.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041431	Ccnb1	ENSMUST00000134080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041431	Ccnb1	ENSMUST00000147790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071203	Naip5	ENSMUST00000049789	ENSMUSP00000058611	TRANSLATION	protein_coding	-	CCDS26727.1	1	1403	8	6.23	0.5	312.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021520	Uqcrb	ENSMUST00000174606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021520	Uqcrb	ENSMUST00000021993	ENSMUSP00000021993	TRANSLATION	protein_coding	-	CCDS26610.1	1	111	0	2.83	15.5	138.9	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000108534	Olfr1360	ENSMUST00000216083	ENSMUSP00000149423	TRANSLATION	protein_coding	-	CCDS36610.1	5	313	0	0.42	6.3	186.6	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000108534	Olfr1360	ENSMUST00000079135	ENSMUSP00000074361	TRANSLATION	protein_coding	-	CCDS36610.1	-	313	0	0.42	6.3	186.6	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000108534	Olfr1360	ENSMUST00000205788	ENSMUSP00000146159	TRANSLATION	protein_coding	-	CCDS36610.1	5	313	0	0.42	6.3	186.6	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044988	Ucn3	ENSMUST00000058610	ENSMUSP00000049678	TRANSLATION	protein_coding	-	CCDS26217.1	1	164	0	0.6	1.5	46.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001504	Irx2	ENSMUST00000167067	ENSMUSP00000127963	TRANSLATION	protein_coding	stop	-	3	93	0	0.6	0	60.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001504	Irx2	ENSMUST00000172353	ENSMUSP00000126691	TRANSLATION	protein_coding	start	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001504	Irx2	ENSMUST00000074372	ENSMUSP00000073976	TRANSLATION	protein_coding	-	CCDS26628.1	1	474	0	0.6	6.3	60.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000001504	Irx2	ENSMUST00000169028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001504	Irx2	ENSMUST00000163393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038883	Prl3a1	ENSMUST00000223739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038883	Prl3a1	ENSMUST00000049463	ENSMUSP00000046522	TRANSLATION	protein_coding	-	CCDS26394.1	1	227	0	3.4	1.5	193.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000114559	Gm47429	ENSMUST00000225905	ENSMUSP00000153091	TRANSLATION	protein_coding	-	-	-	80	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000044951	Mylk4	ENSMUST00000057428	ENSMUSP00000060149	TRANSLATION	protein_coding	-	CCDS49225.1	5	387	18	8.98	0.5	248	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000044951	Mylk4	ENSMUST00000238977	ENSMUSP00000159085	TRANSLATION	protein_coding	-	-	-	667	18	8.98	0.5	248	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000044951	Mylk4	ENSMUST00000229922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044951	Mylk4	ENSMUST00000132206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044951	Mylk4	ENSMUST00000230119	ENSMUSP00000155702	TRANSLATION	protein_coding	stop	-	-	476	17	5.1	0	128.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021660	Btf3	ENSMUST00000152704	ENSMUSP00000118093	TRANSLATION	protein_coding	-	CCDS49340.1	1	162	0	1.6	17.5	92.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021660	Btf3	ENSMUST00000134542	ENSMUSP00000115500	TRANSLATION	protein_coding	-	CCDS49340.1	2	162	0	1.6	17.5	92.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021660	Btf3	ENSMUST00000133461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021660	Btf3	ENSMUST00000133826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021660	Btf3	ENSMUST00000022163	ENSMUSP00000022163	TRANSLATION	protein_coding	-	CCDS26714.1	1	204	0	1.6	6.3	92.4	0	-4,-7	-	-	13.284	MINOR
ENSMUSG00000042869	Olfr1370	ENSMUST00000213848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042869	Olfr1370	ENSMUST00000215357	ENSMUSP00000149738	TRANSLATION	protein_coding	-	CCDS26267.1	5	316	0	0.42	2.7	182.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042869	Olfr1370	ENSMUST00000058168	ENSMUSP00000054533	TRANSLATION	protein_coding	-	CCDS26267.1	-	316	0	0.42	2.7	182.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042869	Olfr1370	ENSMUST00000215806	ENSMUSP00000149341	TRANSLATION	protein_coding	-	CCDS26267.1	5	316	0	0.42	2.7	182.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000069267	H3c2	ENSMUST00000091703	ENSMUSP00000089295	TRANSLATION	protein_coding	-	CCDS26365.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000116207	Nnt	ENSMUST00000223268	ENSMUSP00000152868	TRANSLATION	protein_coding	-	CCDS84067.1	1	835	42	10.94	0.5	867.2	0	-3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000055560	Zfp459	ENSMUST00000223644	ENSMUSP00000153490	TRANSLATION	protein_coding	stop	-	-	111	6	1.7	0	19.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055560	Zfp459	ENSMUST00000224113	ENSMUSP00000153407	TRANSLATION	protein_coding	stop	-	-	166	8	3.25	0	125.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055560	Zfp459	ENSMUST00000224496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055560	Zfp459	ENSMUST00000056470	ENSMUSP00000063027	TRANSLATION	protein_coding	-	CCDS26615.1	1	267	15	3.85	0.5	169	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000009470	Tnpo1	ENSMUST00000109401	ENSMUSP00000105028	TRANSLATION	protein_coding	-	CCDS26717.2	1	898	0	21.08	7.3	105.8	0	-4,-5	-	-	13.648	MINOR
ENSMUSG00000009470	Tnpo1	ENSMUST00000179271	ENSMUSP00000136496	TRANSLATION	protein_coding	stop	-	5	178	0	4.75	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009470	Tnpo1	ENSMUST00000109399	ENSMUSP00000105026	TRANSLATION	protein_coding	-	CCDS36760.1	1	890	0	21.08	16.3	105.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000009470	Tnpo1	ENSMUST00000224022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009470	Tnpo1	ENSMUST00000224099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009470	Tnpo1	ENSMUST00000179301	ENSMUSP00000136917	TRANSLATION	protein_coding	stop	-	1	807	0	18.58	0	105.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050876	Spata31d1a	ENSMUST00000224982	ENSMUSP00000152919	TRANSLATION	protein_coding	-	CCDS49284.1	-	1336	0	0	0.5	433.7	1	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050876	Spata31d1a	ENSMUST00000225362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050876	Spata31d1a	ENSMUST00000066510	ENSMUSP00000128533	TRANSLATION	protein_coding	-	CCDS49284.1	2	1336	0	0	0.5	433.7	1	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050876	Spata31d1a	ENSMUST00000224469	ENSMUSP00000152949	TRANSLATION	protein_coding	-	-	-	131	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000038286	Bphl	ENSMUST00000221124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038286	Bphl	ENSMUST00000222658	ENSMUSP00000152050	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038286	Bphl	ENSMUST00000222691	ENSMUSP00000152684	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038286	Bphl	ENSMUST00000040656	ENSMUSP00000046168	TRANSLATION	protein_coding	-	CCDS49229.1	1	291	0	6.382	2.7	73.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000038286	Bphl	ENSMUST00000223251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038286	Bphl	ENSMUST00000220717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021484	Lman2	ENSMUST00000225366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021484	Lman2	ENSMUST00000225066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021484	Lman2	ENSMUST00000224517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021484	Lman2	ENSMUST00000021940	ENSMUSP00000021940	TRANSLATION	protein_coding	-	CCDS26544.1	1	358	11	6.35	5.1	337	0	0,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000055313	Pgbd1	ENSMUST00000151743	ENSMUSP00000117669	TRANSLATION	protein_coding	-	CCDS49210.1	1	415	0	0	0.5	144.8	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000055313	Pgbd1	ENSMUST00000122872	ENSMUSP00000120175	TRANSLATION	protein_coding	-	CCDS49209.1	1	378	0	0	0.5	144.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000055313	Pgbd1	ENSMUST00000148071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055313	Pgbd1	ENSMUST00000099719	ENSMUSP00000097307	TRANSLATION	protein_coding	-	CCDS49210.1	1	415	0	0	0.5	144.8	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000055313	Pgbd1	ENSMUST00000145494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055313	Pgbd1	ENSMUST00000239222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055313	Pgbd1	ENSMUST00000239296	-	NO_TRANSLATION	transcribed_unitary_pseudogene
ENSMUSG00000055313	Pgbd1	ENSMUST00000239246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000097565	Gm26965	ENSMUST00000167914	ENSMUSP00000137830	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	86	2	0.8	0	85.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000101073	Vmn1r200	ENSMUST00000228726	ENSMUSP00000154179	TRANSLATION	protein_coding	-	CCDS26318.1	-	312	0	0	0.5	123	4	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000101073	Vmn1r200	ENSMUST00000074324	ENSMUSP00000073934	TRANSLATION	protein_coding	-	CCDS26318.1	-	312	0	0	0.5	123	4	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000101073	Vmn1r200	ENSMUST00000227326	ENSMUSP00000153883	TRANSLATION	protein_coding	-	-	-	303	0	0	0	123	4	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000101073	Vmn1r200	ENSMUST00000226901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101073	Vmn1r200	ENSMUST00000226157	ENSMUSP00000154259	TRANSLATION	protein_coding	-	CCDS26318.1	-	312	0	0	0.5	123	4	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000074867	Zfp808	ENSMUST00000099449	ENSMUSP00000097048	TRANSLATION	protein_coding	-	CCDS36696.1	1	753	88	1.85	0.5	537.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074867	Zfp808	ENSMUST00000221542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074867	Zfp808	ENSMUST00000222947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074867	Zfp808	ENSMUST00000221618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074867	Zfp808	ENSMUST00000223094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074867	Zfp808	ENSMUST00000221772	ENSMUSP00000152319	TRANSLATION	protein_coding	-	-	5	136	0	1	0.5	80.1	0	-4,-5	-	-	3.246	MINOR
ENSMUSG00000074867	Zfp808	ENSMUST00000222809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021326	Trim27	ENSMUST00000021761	ENSMUSP00000021761	TRANSLATION	protein_coding	-	CCDS36607.1	1	513	16	4.658	6.3	239.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000021326	Trim27	ENSMUST00000221464	ENSMUSP00000152230	TRANSLATION	protein_coding	-	-	5	337	0	3.458	0	153.6	0	-4,-5	-	-	4.458	MINOR
ENSMUSG00000021326	Trim27	ENSMUST00000124052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021326	Trim27	ENSMUST00000139287	ENSMUSP00000115397	TRANSLATION	nonsense_mediated_decay	start	-	5	61	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021326	Trim27	ENSMUST00000223065	ENSMUSP00000152179	TRANSLATION	protein_coding	-	-	1	314	16	3.46	0	85.7	0	-4,-6	-	-	9.606	MINOR
ENSMUSG00000021326	Trim27	ENSMUST00000124794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021326	Trim27	ENSMUST00000222544	ENSMUSP00000152730	TRANSLATION	protein_coding	-	CCDS36607.1	5	513	16	4.658	6.3	239.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000006488	Prl7a1	ENSMUST00000224852	ENSMUSP00000153047	TRANSLATION	protein_coding	-	-	-	204	0	1.69	0	68.2	0	4,-1	-	-	6.594	MINOR
ENSMUSG00000006488	Prl7a1	ENSMUST00000095924	ENSMUSP00000093614	TRANSLATION	protein_coding	-	CCDS49224.1	1	266	0	2.49	0.5	126.2	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000006488	Prl7a1	ENSMUST00000006659	ENSMUSP00000006659	TRANSLATION	protein_coding	-	CCDS26403.1	1	265	0	2.49	0.5	126.2	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000074715	Ccl28	ENSMUST00000099241	ENSMUSP00000096847	TRANSLATION	protein_coding	-	CCDS56900.1	1	130	0	1.6	0.5	33.2	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000074715	Ccl28	ENSMUST00000225880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069295	Vmn1r196	ENSMUST00000228557	ENSMUSP00000154145	TRANSLATION	protein_coding	-	CCDS49219.1	-	301	0	0	0.5	115.6	10	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069295	Vmn1r196	ENSMUST00000226245	ENSMUSP00000154048	TRANSLATION	protein_coding	-	-	-	224	0	0	0	103.7	8	-4,-2	-	-	5.286	MINOR
ENSMUSG00000069295	Vmn1r196	ENSMUST00000227516	ENSMUSP00000154355	TRANSLATION	protein_coding	-	-	-	116	0	0	0	51.6	6	-4,-7	-	-	2.16	MINOR
ENSMUSG00000069295	Vmn1r196	ENSMUST00000091735	ENSMUSP00000089329	TRANSLATION	protein_coding	-	CCDS49219.1	-	301	0	0	0.5	115.6	10	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069295	Vmn1r196	ENSMUST00000228382	ENSMUSP00000154358	TRANSLATION	protein_coding	-	CCDS49219.1	-	301	0	0	0.5	115.6	10	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057531	Dtnbp1	ENSMUST00000221393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057531	Dtnbp1	ENSMUST00000110128	ENSMUSP00000105755	TRANSLATION	protein_coding	-	-	5	352	0	0	1.5	209.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000057531	Dtnbp1	ENSMUST00000222990	ENSMUSP00000152407	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057531	Dtnbp1	ENSMUST00000221413	ENSMUSP00000152863	TRANSLATION	nonsense_mediated_decay	-	-	5	247	0	0	0	74.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057531	Dtnbp1	ENSMUST00000220555	ENSMUSP00000152195	TRANSLATION	protein_coding	-	-	5	342	0	0	0	209.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000057531	Dtnbp1	ENSMUST00000072329	ENSMUSP00000072170	TRANSLATION	protein_coding	-	CCDS36647.1	1	352	0	0	1.5	209.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000057531	Dtnbp1	ENSMUST00000223524	ENSMUSP00000152855	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057531	Dtnbp1	ENSMUST00000223265	ENSMUSP00000152362	TRANSLATION	nonsense_mediated_decay	start	-	5	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057531	Dtnbp1	ENSMUST00000222583	ENSMUSP00000152812	TRANSLATION	nonsense_mediated_decay	-	-	5	271	0	0	0	209.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057531	Dtnbp1	ENSMUST00000222321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057531	Dtnbp1	ENSMUST00000222805	ENSMUSP00000152706	TRANSLATION	protein_coding	-	-	1	178	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021348	Prl7d1	ENSMUST00000224026	ENSMUSP00000153033	TRANSLATION	protein_coding	-	CCDS26405.1	-	244	0	3.8	1.5	256.4	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000021348	Prl7d1	ENSMUST00000021776	ENSMUSP00000021776	TRANSLATION	protein_coding	-	-	1	243	0	3.8	1.5	256.4	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000021348	Prl7d1	ENSMUST00000145879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099583	H3c4	ENSMUST00000105105	ENSMUSP00000100737	TRANSLATION	protein_coding	-	CCDS26352.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021301	Hecw1	ENSMUST00000223317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021301	Hecw1	ENSMUST00000110516	ENSMUSP00000106145	TRANSLATION	protein_coding	-	CCDS49207.1	5	1604	6	16.56	0.5	632.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021301	Hecw1	ENSMUST00000221274	ENSMUSP00000152351	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	29.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021301	Hecw1	ENSMUST00000222241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021301	Hecw1	ENSMUST00000223283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021301	Hecw1	ENSMUST00000223189	ENSMUSP00000152279	TRANSLATION	protein_coding	stop	-	3	132	0	1.85	0	99.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021301	Hecw1	ENSMUST00000222904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021301	Hecw1	ENSMUST00000223550	ENSMUSP00000152688	TRANSLATION	protein_coding	stop	-	2	23	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021301	Hecw1	ENSMUST00000220718	ENSMUSP00000152215	TRANSLATION	protein_coding	start	-	1	1177	6	12.96	0	394.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021301	Hecw1	ENSMUST00000221863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095653	Gm21818	ENSMUST00000225144	ENSMUSP00000153413	TRANSLATION	protein_coding	-	-	-	170	0	0	0.5	305.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095653	Gm21818	ENSMUST00000178828	ENSMUSP00000135996	TRANSLATION	protein_coding	-	-	-	170	0	0	0.5	305.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000114487	Gm49393	ENSMUST00000225382	ENSMUSP00000153109	TRANSLATION	nonsense_mediated_decay,RT	start	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000071281	Zfp65	ENSMUST00000130891	ENSMUSP00000123380	TRANSLATION	protein_coding	stop	-	5	333	33	4.32	0	206.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071281	Zfp65	ENSMUST00000223829	ENSMUSP00000153058	TRANSLATION	protein_coding	stop	-	-	226	19	3.32	0	145.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071281	Zfp65	ENSMUST00000127979	ENSMUSP00000117218	TRANSLATION	protein_coding	stop	-	3	182	13	2.32	0	121.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071281	Zfp65	ENSMUST00000073157	ENSMUSP00000072900	TRANSLATION	protein_coding	-	CCDS49303.1	1	390	42	5.32	0.5	265.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000015671	Psma2	ENSMUST00000221168	ENSMUSP00000152327	TRANSLATION	protein_coding	start	-	2	183	3	5	0	175.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015671	Psma2	ENSMUST00000170836	ENSMUSP00000129767	TRANSLATION	protein_coding	-	CCDS36602.1	1	234	4	6.58	19.5	241.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000007836	Hnrnpa0	ENSMUST00000007980	ENSMUSP00000007980	TRANSLATION	protein_coding	-	CCDS49280.1	-	305	0	0.8	0.5	106.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021432	Slc35b3	ENSMUST00000224854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021432	Slc35b3	ENSMUST00000223619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021432	Slc35b3	ENSMUST00000167513	ENSMUSP00000126016	TRANSLATION	protein_coding	-	CCDS26466.1	1	369	0	0	6.4	310.3	20	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000021432	Slc35b3	ENSMUST00000225396	ENSMUSP00000153305	TRANSLATION	protein_coding	start	-	-	156	0	0	0	140.5	11	2,-2	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000225568	ENSMUSP00000153485	TRANSLATION	protein_coding	stop	-	-	232	0	0	0	243.9	15	-4,-7	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000224429	ENSMUSP00000153010	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000021870	ENSMUSP00000021870	TRANSLATION	protein_coding	-	CCDS49240.1	1	413	0	0	1.5	310.3	20	-4,-5	-	-	6.186	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000225432	ENSMUSP00000153046	TRANSLATION	protein_coding	-	CCDS26466.1	-	369	0	0	6.4	310.3	20	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000021432	Slc35b3	ENSMUST00000225461	ENSMUSP00000153411	TRANSLATION	nonsense_mediated_decay	-	-	-	132	0	0	0	53.6	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000225331	ENSMUSP00000153151	TRANSLATION	protein_coding	stop	-	-	119	0	0	0	65.9	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000224645	ENSMUSP00000153644	TRANSLATION	protein_coding	stop	-	-	149	0	0	0	133.7	10	-2,-4	-	-	-1	MINOR
ENSMUSG00000021432	Slc35b3	ENSMUST00000225714	ENSMUSP00000153154	TRANSLATION	nonsense_mediated_decay	-	-	-	132	0	0	0	53.6	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000021482	Prxl2c	ENSMUST00000220895	ENSMUSP00000152062	TRANSLATION	protein_coding	-	-	1	182	0	0	1	45.9	0	-4,-1	-	-	3.726	MINOR
ENSMUSG00000021482	Prxl2c	ENSMUST00000222286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021482	Prxl2c	ENSMUST00000222570	ENSMUSP00000152323	TRANSLATION	protein_coding	-	CCDS26599.1	1	226	0	0	1.5	73.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000021482	Prxl2c	ENSMUST00000021938	ENSMUSP00000021938	TRANSLATION	protein_coding	start	-	1	172	0	0	0	60.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021482	Prxl2c	ENSMUST00000221350	ENSMUSP00000152238	TRANSLATION	protein_coding	start	-	3	93	0	0	0	31.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021482	Prxl2c	ENSMUST00000221399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021482	Prxl2c	ENSMUST00000221118	ENSMUSP00000152675	TRANSLATION	protein_coding	start	-	2	111	0	0	0	45	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021390	Ogn	ENSMUST00000021822	ENSMUSP00000021822	TRANSLATION	protein_coding	-	CCDS26505.1	1	298	0	2.86	5.1	40.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021596	Mctp1	ENSMUST00000122843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021596	Mctp1	ENSMUST00000155275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021596	Mctp1	ENSMUST00000109589	ENSMUSP00000105218	TRANSLATION	protein_coding	-	-	1	187	8	2.98	1.2	76	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021596	Mctp1	ENSMUST00000137052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021596	Mctp1	ENSMUST00000125209	ENSMUSP00000118958	TRANSLATION	protein_coding	-	-	1	951	21	9.33	0.5	239.5	4	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000021596	Mctp1	ENSMUST00000126960	ENSMUSP00000120673	TRANSLATION	protein_coding	-	-	1	319	16	4.52	0	149.9	0	-4,-5	-	-	3.288	MINOR
ENSMUSG00000021596	Mctp1	ENSMUST00000109583	ENSMUSP00000105212	TRANSLATION	protein_coding	-	CCDS26656.1	5	694	21	9.13	1.7	239.5	4	-4,-7	-	-	17.598	PRINCIPAL:2
ENSMUSG00000021596	Mctp1	ENSMUST00000149028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057069	Ero1lb	ENSMUST00000071973	ENSMUSP00000071864	TRANSLATION	protein_coding	-	CCDS36594.1	1	467	18	10.205	6.3	424.6	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000057069	Ero1lb	ENSMUST00000220811	ENSMUSP00000152543	TRANSLATION	protein_coding	-	-	1	485	18	9.705	0	415.7	0	1,-3	-	-	16.464	MINOR
ENSMUSG00000057069	Ero1lb	ENSMUST00000221739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057069	Ero1lb	ENSMUST00000221560	ENSMUSP00000152393	TRANSLATION	protein_coding	-	-	1	493	18	9.705	0.5	415.5	0	1,-3	-	-	16.452	MINOR
ENSMUSG00000099611	Vmn1r189	ENSMUST00000228428	ENSMUSP00000154722	TRANSLATION	protein_coding	-	CCDS26310.1	-	312	0	0	0.5	115.3	4	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000099611	Vmn1r189	ENSMUST00000227357	ENSMUSP00000153757	TRANSLATION	protein_coding	-	CCDS26310.1	-	312	0	0	0.5	115.3	4	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000099611	Vmn1r189	ENSMUST00000186062	ENSMUSP00000140924	TRANSLATION	protein_coding	-	CCDS26310.1	-	312	0	0	0.5	115.3	4	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039087	Rreb1	ENSMUST00000037232	ENSMUSP00000049265	TRANSLATION	protein_coding	-	CCDS49238.1	5	1754	59	4.355	0.5	174.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039087	Rreb1	ENSMUST00000138043	ENSMUSP00000124745	TRANSLATION	protein_coding	stop	-	2	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000122842	ENSMUSP00000117048	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000149745	ENSMUSP00000121211	TRANSLATION	protein_coding	-	CCDS36634.1	1	1291	43	2.695	0.5	127.5	0	-4,-5	-	-	5.886	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000128570	ENSMUSP00000115599	TRANSLATION	protein_coding	-	CCDS49238.1	5	1754	59	4.355	0.5	174.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039087	Rreb1	ENSMUST00000124373	ENSMUSP00000118420	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0.135	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000162849	ENSMUSP00000124802	TRANSLATION	protein_coding	start	-	2	320	8	0.3	0	20.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000110238	ENSMUSP00000105867	TRANSLATION	protein_coding	-	CCDS36634.1	1	1291	43	2.695	0.5	127.5	0	-4,-5	-	-	5.886	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000124268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039087	Rreb1	ENSMUST00000138110	ENSMUSP00000116557	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039087	Rreb1	ENSMUST00000110237	ENSMUSP00000105866	TRANSLATION	protein_coding	-	CCDS36634.1	1	1291	43	2.695	0.5	127.5	0	-4,-5	-	-	5.886	MINOR
ENSMUSG00000044444	Pfn3	ENSMUST00000054146	ENSMUSP00000054053	TRANSLATION	protein_coding	-	CCDS26545.1	-	137	0	1	7.6	68.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000068184	Ndufaf2	ENSMUST00000225702	ENSMUSP00000153468	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	0	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000068184	Ndufaf2	ENSMUST00000223734	ENSMUSP00000153480	TRANSLATION	protein_coding	-	-	-	77	0	0	0	27	0	-4,-2	-	-	3.516	MINOR
ENSMUSG00000068184	Ndufaf2	ENSMUST00000225830	ENSMUSP00000153552	TRANSLATION	protein_coding	start/stop	-	-	83	0	0	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068184	Ndufaf2	ENSMUST00000163558	ENSMUSP00000130532	TRANSLATION	protein_coding	-	CCDS49357.1	1	168	0	0	2.7	46.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000054757	Akr1c20	ENSMUST00000080361	ENSMUSP00000079232	TRANSLATION	protein_coding	-	CCDS79161.1	1	323	27	8	6.3	180.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000054757	Akr1c20	ENSMUST00000221564	ENSMUSP00000152648	TRANSLATION	protein_coding	start/stop	-	3	277	26	6.75	0	138	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054757	Akr1c20	ENSMUST00000078239	ENSMUSP00000077363	TRANSLATION	protein_coding	-	-	1	262	26	6.066	0.5	126	0	-4,-5	-	-	10.2	MINOR
ENSMUSG00000096323	Gm20767	ENSMUST00000179071	ENSMUSP00000137504	TRANSLATION	protein_coding	-	CCDS56908.1	-	169	0	0	0.5	299.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096323	Gm20767	ENSMUST00000225683	ENSMUSP00000152988	TRANSLATION	protein_coding	-	CCDS56908.1	-	169	0	0	0.5	299.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046957	Spz1	ENSMUST00000050658	ENSMUSP00000054083	TRANSLATION	protein_coding	-	CCDS26683.1	-	378	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021692	Dimt1	ENSMUST00000224052	ENSMUSP00000152938	TRANSLATION	nonsense_mediated_decay	-	-	-	71	1	1.06	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021692	Dimt1	ENSMUST00000223851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021692	Dimt1	ENSMUST00000223870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021692	Dimt1	ENSMUST00000022203	ENSMUSP00000022203	TRANSLATION	protein_coding	-	CCDS26758.1	1	313	15	8.9	8.8	30.5	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000012422	Tmem167	ENSMUST00000161457	ENSMUSP00000124571	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	72.2	0	1,-4	-	-	-1	MINOR
ENSMUSG00000012422	Tmem167	ENSMUST00000012566	ENSMUSP00000012566	TRANSLATION	protein_coding	-	-	5	60	0	0	0	72.2	0	1,-4	-	-	6	MINOR
ENSMUSG00000012422	Tmem167	ENSMUST00000161568	ENSMUSP00000125314	TRANSLATION	protein_coding	-	CCDS36741.1	1	72	0	0	21.5	72.2	0	1,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000074847	Gm10775	ENSMUST00000099425	ENSMUSP00000097022	TRANSLATION	protein_coding	-	-	1	127	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021713	Ppwd1	ENSMUST00000225798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021713	Ppwd1	ENSMUST00000223755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021713	Ppwd1	ENSMUST00000022226	ENSMUSP00000022226	TRANSLATION	protein_coding	-	CCDS26748.1	1	646	8	3.75	7.5	200.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000051456	Hspb3	ENSMUST00000054650	ENSMUSP00000054193	TRANSLATION	protein_coding	-	CCDS26785.1	-	154	0	0.6	1.5	55.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042426	Dhx29	ENSMUST00000224176	ENSMUSP00000153182	TRANSLATION	nonsense_mediated_decay	-	-	-	272	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000042426	Dhx29	ENSMUST00000226022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042426	Dhx29	ENSMUST00000038574	ENSMUSP00000035244	TRANSLATION	protein_coding	-	CCDS26779.1	1	1365	10	10.57	0.5	199.7	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000042426	Dhx29	ENSMUST00000223866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090853	Gm17364	ENSMUST00000163881	ENSMUSP00000130129	TRANSLATION	protein_coding	start/stop	-	5	24	0	0	0	0	0	-3,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000021589	Rhobtb3	ENSMUST00000109606	ENSMUSP00000105235	TRANSLATION	protein_coding	-	-	1	260	0	0.72	0	26.7	0	-4,-5	-	-	3.456	MINOR
ENSMUSG00000021589	Rhobtb3	ENSMUST00000220939	ENSMUSP00000152801	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021589	Rhobtb3	ENSMUST00000022078	ENSMUSP00000022078	TRANSLATION	protein_coding	-	CCDS26652.1	1	611	0	2.595	6.3	89.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021589	Rhobtb3	ENSMUST00000222923	ENSMUSP00000152589	TRANSLATION	protein_coding	start	-	1	88	0	0.42	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021589	Rhobtb3	ENSMUST00000123353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049985	Ankrd55	ENSMUST00000022275	ENSMUSP00000022275	TRANSLATION	protein_coding	-	CCDS26772.1	1	626	0	5.998	0.5	121.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049985	Ankrd55	ENSMUST00000223871	ENSMUSP00000153075	TRANSLATION	protein_coding	-	-	-	134	0	3.2	0	31.3	0	-4,-5	-	-	0.996	MINOR
ENSMUSG00000049985	Ankrd55	ENSMUST00000168684	ENSMUSP00000129726	TRANSLATION	protein_coding	-	CCDS49364.1	1	273	0	5.196	0.5	75.8	0	-4,-5	-	-	7.662	MINOR
ENSMUSG00000049985	Ankrd55	ENSMUST00000056047	ENSMUSP00000058891	TRANSLATION	protein_coding	-	CCDS49363.1	1	221	0	3.538	0.5	30.9	0	-4,-5	-	-	1.65	MINOR
ENSMUSG00000049985	Ankrd55	ENSMUST00000225329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049985	Ankrd55	ENSMUST00000165593	ENSMUSP00000126199	TRANSLATION	protein_coding	-	CCDS49365.1	5	598	0	5.8	0.5	109.3	0	-4,-5	-	-	10.878	MINOR
ENSMUSG00000035711	Dok3	ENSMUST00000047877	ENSMUSP00000046695	TRANSLATION	protein_coding	-	CCDS26548.1	1	444	0	2.2	1.5	108.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035711	Dok3	ENSMUST00000223944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035711	Dok3	ENSMUST00000223563	ENSMUSP00000153308	TRANSLATION	protein_coding	-	CCDS26548.1	-	444	0	2.2	1.5	108.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023132	Gzma	ENSMUST00000224282	ENSMUSP00000153593	TRANSLATION	protein_coding	-	-	-	257	12	4	0	200.2	0	-4,-5	-	-	17.1	ALTERNATIVE:2
ENSMUSG00000023132	Gzma	ENSMUST00000023897	ENSMUSP00000023897	TRANSLATION	protein_coding	-	CCDS26782.1	1	260	12	4.45	1.5	200.2	0	3,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000079092	Prl2c2	ENSMUST00000221612	ENSMUSP00000152538	TRANSLATION	protein_coding	-	-	1	188	0	2.06	0.5	187.3	0	3,-2	-	-	6.432	MINOR
ENSMUSG00000079092	Prl2c2	ENSMUST00000221627	ENSMUSP00000152254	TRANSLATION	protein_coding	stop	-	3	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079092	Prl2c2	ENSMUST00000223124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079092	Prl2c2	ENSMUST00000110594	ENSMUSP00000106224	TRANSLATION	protein_coding	-	CCDS36596.1	1	224	0	3.06	0.5	246.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079092	Prl2c2	ENSMUST00000220558	ENSMUSP00000152202	TRANSLATION	protein_coding	stop	-	5	117	0	1.6	0	112.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000043183	Simc1	ENSMUST00000126506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043183	Simc1	ENSMUST00000138869	ENSMUSP00000124474	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043183	Simc1	ENSMUST00000118072	ENSMUSP00000112376	TRANSLATION	protein_coding	-	-	5	453	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043183	Simc1	ENSMUST00000150011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043183	Simc1	ENSMUST00000121401	ENSMUSP00000113676	TRANSLATION	protein_coding	-	CCDS26528.2	5	1354	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000043183	Simc1	ENSMUST00000159721	ENSMUSP00000124921	TRANSLATION	protein_coding	stop	-	2	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043183	Simc1	ENSMUST00000123852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060176	Kif27	ENSMUST00000225388	ENSMUSP00000153598	TRANSLATION	protein_coding	-	CCDS26570.1	-	1394	12	2.8	1.5	371.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060176	Kif27	ENSMUST00000224694	ENSMUSP00000153268	TRANSLATION	nonsense_mediated_decay	-	-	-	144	11	1	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060176	Kif27	ENSMUST00000043605	ENSMUSP00000043304	TRANSLATION	protein_coding	-	CCDS26570.1	5	1394	12	2.8	1.5	371.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060176	Kif27	ENSMUST00000225680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021306	Gpr137b	ENSMUST00000223093	ENSMUSP00000152434	TRANSLATION	nonsense_mediated_decay	-	-	1	393	0	0	1.5	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000021306	Gpr137b	ENSMUST00000221498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021306	Gpr137b	ENSMUST00000222958	ENSMUSP00000152888	TRANSLATION	nonsense_mediated_decay	-	-	1	139	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000021306	Gpr137b	ENSMUST00000021738	ENSMUSP00000021738	TRANSLATION	protein_coding	-	CCDS26243.1	1	385	0	0	6.7	0	8	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000021306	Gpr137b	ENSMUST00000222482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021306	Gpr137b	ENSMUST00000220628	ENSMUSP00000152494	TRANSLATION	protein_coding	-	-	1	393	0	0	1.5	0	8	-4,-7	-	-	0.176	MINOR
ENSMUSG00000021306	Gpr137b	ENSMUST00000221340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021364	Elovl2	ENSMUST00000117096	ENSMUSP00000114112	TRANSLATION	protein_coding	-	CCDS79180.1	1	275	0	0	2.8	213.1	5	-4,-5	-	-	6.818	MINOR
ENSMUSG00000021364	Elovl2	ENSMUST00000021793	ENSMUSP00000021793	TRANSLATION	protein_coding	-	CCDS36639.1	1	292	0	0	5.4	213.1	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000101578	Vmn1r206	ENSMUST00000227244	ENSMUSP00000154713	TRANSLATION	protein_coding	-	CCDS26323.1	-	312	0	0	0.5	118.8	3	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000101578	Vmn1r206	ENSMUST00000187140	ENSMUSP00000139772	TRANSLATION	protein_coding	-	CCDS26323.1	-	312	0	0	0.5	118.8	3	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076431	Sox4	ENSMUST00000067230	ENSMUSP00000100013	TRANSLATION	protein_coding	-	CCDS26411.1	-	440	0	0.4	1.5	90.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021336	Slc17a4	ENSMUST00000021769	ENSMUSP00000021769	TRANSLATION	protein_coding	-	CCDS49221.1	5	492	0	0	1.5	156.7	19	-4,-5	-	-	5.112	PRINCIPAL:2
ENSMUSG00000021336	Slc17a4	ENSMUST00000110407	ENSMUSP00000106037	TRANSLATION	protein_coding	-	-	1	452	0	0	0.5	171.5	18	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021336	Slc17a4	ENSMUST00000225797	ENSMUSP00000153087	TRANSLATION	nonsense_mediated_decay	-	-	-	254	0	0	0	44.3	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000021336	Slc17a4	ENSMUST00000224360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021336	Slc17a4	ENSMUST00000225763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048996	Olfr1366	ENSMUST00000175637	ENSMUSP00000135446	TRANSLATION	protein_coding	-	-	3	313	0	0.42	1.2	198.9	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000048996	Olfr1366	ENSMUST00000218154	ENSMUSP00000151506	TRANSLATION	protein_coding	-	CCDS26279.2	-	328	0	0.42	0.5	198.9	7	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000048996	Olfr1366	ENSMUST00000168629	ENSMUSP00000132776	TRANSLATION	protein_coding	-	-	-	313	0	0.42	1.2	198.9	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000048996	Olfr1366	ENSMUST00000205976	ENSMUSP00000146107	TRANSLATION	protein_coding	-	-	5	313	0	0.42	1.2	198.9	7	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000048376	F2r	ENSMUST00000059193	ENSMUSP00000061754	TRANSLATION	protein_coding	-	CCDS26701.1	1	430	0	1	0.5	134.1	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000021534	1700001L19Rik	ENSMUST00000222604	ENSMUSP00000152877	TRANSLATION	protein_coding	-	CCDS49306.1	1	182	0	0	0.5	131.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021534	1700001L19Rik	ENSMUST00000022007	ENSMUSP00000022007	TRANSLATION	protein_coding	-	CCDS49306.1	1	182	0	0	0.5	131.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021359	Tfap2a	ENSMUST00000224319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021359	Tfap2a	ENSMUST00000224700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021359	Tfap2a	ENSMUST00000223908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021359	Tfap2a	ENSMUST00000110193	ENSMUSP00000105822	TRANSLATION	protein_coding	-	CCDS26467.1	1	437	0	0	12	289.5	0	-4,-5	-	-	9.668	PRINCIPAL:3
ENSMUSG00000021359	Tfap2a	ENSMUST00000225180	ENSMUSP00000153271	TRANSLATION	protein_coding	-	-	-	466	0	0	0.5	289.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000021359	Tfap2a	ENSMUST00000224999	ENSMUSP00000153522	TRANSLATION	protein_coding	-	-	-	439	0	0	12	289.5	0	-4,-5	-	-	9.668	ALTERNATIVE:1
ENSMUSG00000021359	Tfap2a	ENSMUST00000223869	ENSMUSP00000153149	TRANSLATION	protein_coding	-	-	-	433	0	0	10.8	289.5	0	-4,-5	-	-	9.268	ALTERNATIVE:1
ENSMUSG00000021359	Tfap2a	ENSMUST00000021787	ENSMUSP00000021787	TRANSLATION	protein_coding	-	CCDS49243.1	1	431	0	0	13	289.5	0	-4,-7	-	-	10	ALTERNATIVE:1
ENSMUSG00000021359	Tfap2a	ENSMUST00000224665	ENSMUSP00000153667	TRANSLATION	protein_coding	-	-	-	439	0	0	12	289.5	0	-4,-5	-	-	9.668	ALTERNATIVE:1
ENSMUSG00000069227	Gprin1	ENSMUST00000135343	ENSMUSP00000115539	TRANSLATION	protein_coding	-	CCDS26534.1	1	932	0	0	0.5	137.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069227	Gprin1	ENSMUST00000099506	ENSMUSP00000097106	TRANSLATION	protein_coding	-	CCDS26534.1	1	932	0	0	0.5	137.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000071451	Psmg4	ENSMUST00000124996	ENSMUSP00000120336	TRANSLATION	protein_coding	-	CCDS49231.1	1	82	0	1.45	0.5	33.6	0	-4,-5	-	-	5.286	MINOR
ENSMUSG00000071451	Psmg4	ENSMUST00000147632	ENSMUSP00000115881	TRANSLATION	protein_coding	-	CCDS49230.1	1	123	0	3	9.6	84.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000050954	Zfp169	ENSMUST00000177474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050954	Zfp169	ENSMUST00000176949	ENSMUSP00000135695	TRANSLATION	protein_coding	stop	-	3	107	0	0.8	0	83.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050954	Zfp169	ENSMUST00000167682	ENSMUSP00000127591	TRANSLATION	protein_coding	-	CCDS49256.1	5	136	0	0.8	0.5	83.3	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000050954	Zfp169	ENSMUST00000176996	ENSMUSP00000135520	TRANSLATION	protein_coding	stop	-	2	132	0	0.8	0	83.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050954	Zfp169	ENSMUST00000176176	ENSMUSP00000134793	TRANSLATION	protein_coding	-	CCDS49256.1	1	136	0	0.8	0.5	83.3	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000050954	Zfp169	ENSMUST00000110110	ENSMUSP00000105737	TRANSLATION	protein_coding	-	CCDS26493.2	5	731	68	1.2	1.5	442	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000050954	Zfp169	ENSMUST00000177530	ENSMUSP00000135414	TRANSLATION	protein_coding	-	CCDS26493.2	1	731	68	1.2	1.5	442	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000058773	H1f5	ENSMUST00000080511	ENSMUSP00000079356	TRANSLATION	protein_coding	-	CCDS26295.1	-	223	0	0.6	0.5	80.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067122	Gm10198	ENSMUST00000086960	ENSMUSP00000084179	TRANSLATION	protein_coding	start/stop	-	-	24	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021518	Ptdss1	ENSMUST00000225024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021518	Ptdss1	ENSMUST00000224175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021518	Ptdss1	ENSMUST00000224244	ENSMUSP00000153610	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	0	0	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000021518	Ptdss1	ENSMUST00000224290	ENSMUSP00000153371	TRANSLATION	nonsense_mediated_decay	-	-	-	106	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000021518	Ptdss1	ENSMUST00000021990	ENSMUSP00000021990	TRANSLATION	protein_coding	-	CCDS26612.1	1	473	0	0	14.8	354.4	10	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000021518	Ptdss1	ENSMUST00000225347	ENSMUSP00000153296	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000061474	Mrps36	ENSMUST00000150113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061474	Mrps36	ENSMUST00000109333	ENSMUSP00000104957	TRANSLATION	protein_coding	-	CCDS36767.1	1	102	0	0	8.8	27.3	0	-4,-2	-	-	9	PRINCIPAL:3
ENSMUSG00000061474	Mrps36	ENSMUST00000125206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061474	Mrps36	ENSMUST00000076037	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061474	Mrps36	ENSMUST00000132955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061474	Mrps36	ENSMUST00000078573	ENSMUSP00000104954	TRANSLATION	protein_coding	-	CCDS49347.1	1	100	0	0	8.8	26.9	0	-4,-2	-	-	8.91	ALTERNATIVE:1
ENSMUSG00000045136	Tubb2b	ENSMUST00000220744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045136	Tubb2b	ENSMUST00000075774	ENSMUSP00000075178	TRANSLATION	protein_coding	-	CCDS26445.1	1	445	19	3.5	15	379.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047462	Gpr141b	ENSMUST00000151029	ENSMUSP00000158601	TRANSLATION	protein_coding	-	-	1	299	0	0.2	1.5	26.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042364	Snx18	ENSMUST00000224883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042364	Snx18	ENSMUST00000223993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042364	Snx18	ENSMUST00000109241	ENSMUSP00000104864	TRANSLATION	protein_coding	-	CCDS36784.1	1	615	0	1.8	1.5	481.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035367	Rmi1	ENSMUST00000225815	ENSMUSP00000153621	TRANSLATION	protein_coding	-	CCDS26571.1	-	616	0	0.6	1.5	329.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035367	Rmi1	ENSMUST00000224758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035367	Rmi1	ENSMUST00000042450	ENSMUSP00000041035	TRANSLATION	protein_coding	-	CCDS26571.1	1	616	0	0.6	1.5	329.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035367	Rmi1	ENSMUST00000224479	ENSMUSP00000153050	TRANSLATION	protein_coding	-	CCDS26571.1	-	616	0	0.6	1.5	329.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035367	Rmi1	ENSMUST00000225828	ENSMUSP00000153675	TRANSLATION	protein_coding	-	CCDS26571.1	-	616	0	0.6	1.5	329.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000071490	Vmn1r212	ENSMUST00000095960	ENSMUSP00000093655	TRANSLATION	protein_coding	-	CCDS26327.1	-	357	0	0	0.5	119.1	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035840	Lysmd3	ENSMUST00000224300	ENSMUSP00000152940	TRANSLATION	protein_coding	-	CCDS26660.1	-	305	0	0	4.1	20.3	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000035840	Lysmd3	ENSMUST00000224420	ENSMUSP00000152945	TRANSLATION	protein_coding	start	-	-	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035840	Lysmd3	ENSMUST00000224592	ENSMUSP00000153026	TRANSLATION	protein_coding	stop	-	-	73	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035840	Lysmd3	ENSMUST00000049055	ENSMUSP00000038275	TRANSLATION	protein_coding	-	-	1	91	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000060404	Olfr1369-ps1	ENSMUST00000213326	ENSMUSP00000150565	TRANSLATION	protein_coding	-	-	5	317	0	0.2	6.3	156.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060404	Olfr1369-ps1	ENSMUST00000079050	ENSMUSP00000078059	TRANSLATION	protein_coding	-	-	-	317	0	0.2	6.3	156.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060404	Olfr1369-ps1	ENSMUST00000215941	ENSMUSP00000151041	TRANSLATION	protein_coding	-	-	5	317	0	0.2	6.3	156.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060404	Olfr1369-ps1	ENSMUST00000215207	ENSMUSP00000150616	TRANSLATION	protein_coding	-	-	5	317	0	0.2	6.3	156.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060404	Olfr1369-ps1	ENSMUST00000213922	ENSMUSP00000150327	TRANSLATION	protein_coding	-	-	5	317	0	0.2	6.3	156.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021624	Cd180	ENSMUST00000170878	ENSMUSP00000127880	TRANSLATION	protein_coding	-	-	3	105	0	1.8	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000021624	Cd180	ENSMUST00000171267	ENSMUSP00000129096	TRANSLATION	protein_coding	-	-	1	86	0	1.8	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000021624	Cd180	ENSMUST00000167144	ENSMUSP00000133015	TRANSLATION	protein_coding	-	-	2	69	0	0.8	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000021624	Cd180	ENSMUST00000172138	ENSMUSP00000131402	TRANSLATION	protein_coding	-	-	2	41	0	0.8	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000021624	Cd180	ENSMUST00000022124	ENSMUSP00000022124	TRANSLATION	protein_coding	-	CCDS26741.1	1	661	0	4.8	0.5	118.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000060081	H2ac1	ENSMUST00000072391	ENSMUSP00000072227	TRANSLATION	protein_coding	-	CCDS26374.1	-	129	0	1	14.8	140.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000069266	H4c2	ENSMUST00000102965	ENSMUSP00000100030	TRANSLATION	protein_coding	-	CCDS26366.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000054890	Olfr1535	ENSMUST00000217519	ENSMUSP00000149589	TRANSLATION	protein_coding	-	CCDS26280.1	5	326	0	0.24	0.5	155.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054890	Olfr1535	ENSMUST00000068163	ENSMUSP00000064142	TRANSLATION	protein_coding	-	CCDS26280.1	-	326	0	0.24	0.5	155.7	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034617	Mtrr	ENSMUST00000221259	ENSMUSP00000152593	TRANSLATION	protein_coding	stop	-	3	68	12	1.24	0	52.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034617	Mtrr	ENSMUST00000220544	ENSMUSP00000152659	TRANSLATION	protein_coding	start	-	3	190	20	4.198	0	59.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034617	Mtrr	ENSMUST00000045827	ENSMUSP00000039810	TRANSLATION	protein_coding	-	CCDS26620.1	1	696	55	13.94	3.9	330.4	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000034617	Mtrr	ENSMUST00000222107	ENSMUSP00000152837	TRANSLATION	nonsense_mediated_decay	-	-	5	58	6	0.64	0	31.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034617	Mtrr	ENSMUST00000223398	ENSMUSP00000152387	TRANSLATION	protein_coding	-	CCDS26620.1	1	696	55	13.94	3.9	330.4	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000034617	Mtrr	ENSMUST00000221800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034617	Mtrr	ENSMUST00000223101	ENSMUSP00000152884	TRANSLATION	nonsense_mediated_decay	-	-	1	157	20	3.06	0	105.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034617	Mtrr	ENSMUST00000220973	ENSMUSP00000152561	TRANSLATION	protein_coding	stop	-	2	93	12	1.69	0	57.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034617	Mtrr	ENSMUST00000223055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021493	Pdlim7	ENSMUST00000128910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021493	Pdlim7	ENSMUST00000069968	ENSMUSP00000070153	TRANSLATION	protein_coding	-	CCDS49276.1	1	222	0	2.764	6.3	50.8	0	-4,-6	-	-	2	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000144288	ENSMUSP00000121614	TRANSLATION	protein_coding	stop	-	5	124	0	2.764	0	50.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000153230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021493	Pdlim7	ENSMUST00000069929	ENSMUSP00000064219	TRANSLATION	protein_coding	-	CCDS26547.1	1	188	0	2.764	1.5	50.8	0	-4,-6	-	-	0.188	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000131306	ENSMUSP00000119753	TRANSLATION	protein_coding	-	-	2	219	0	2.764	0	50.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000153426	ENSMUSP00000118867	TRANSLATION	protein_coding	stop	-	3	58	0	1.75	0	35.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000046246	ENSMUSP00000047173	TRANSLATION	protein_coding	-	CCDS49275.1	1	457	23	6.134	6.3	197.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000021493	Pdlim7	ENSMUST00000155098	ENSMUSP00000120465	TRANSLATION	nonsense_mediated_decay	-	-	1	457	23	6.134	6.3	197.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021493	Pdlim7	ENSMUST00000128911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021493	Pdlim7	ENSMUST00000136583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067455	H4c11	ENSMUST00000087714	ENSMUSP00000085006	TRANSLATION	protein_coding	-	CCDS26291.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021666	Gfm2	ENSMUST00000161639	ENSMUSP00000125656	TRANSLATION	protein_coding	-	CCDS26708.2	1	779	20	13.704	5.1	439.7	0	-4,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000021666	Gfm2	ENSMUST00000161518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021666	Gfm2	ENSMUST00000042084	ENSMUSP00000048373	TRANSLATION	protein_coding	-	CCDS70490.1	1	752	20	13.434	0.5	439.4	0	-4,-2	-	-	17.442	MINOR
ENSMUSG00000021666	Gfm2	ENSMUST00000160139	ENSMUSP00000124426	TRANSLATION	protein_coding	stop	-	5	244	12	5.544	0	192.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021666	Gfm2	ENSMUST00000161825	ENSMUSP00000125088	TRANSLATION	protein_coding	-	CCDS49338.1	2	741	20	13.104	0.5	403.7	0	-4,-2	-	-	14.64	MINOR
ENSMUSG00000021666	Gfm2	ENSMUST00000159321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021666	Gfm2	ENSMUST00000161929	ENSMUSP00000125306	TRANSLATION	protein_coding	stop	-	3	94	7	0.95	0	34.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021666	Gfm2	ENSMUST00000161843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021666	Gfm2	ENSMUST00000022170	ENSMUSP00000022170	TRANSLATION	protein_coding	-	CCDS70491.1	2	777	20	13.704	3.9	439.7	0	-4,-1	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000021666	Gfm2	ENSMUST00000161913	ENSMUSP00000124253	TRANSLATION	protein_coding	-	-	2	543	16	9.984	0	270	0	-4,-2	-	-	3.336	MINOR
ENSMUSG00000021666	Gfm2	ENSMUST00000160989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021666	Gfm2	ENSMUST00000160981	ENSMUSP00000125682	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045767	B230219D22Rik	ENSMUST00000057844	ENSMUSP00000055271	TRANSLATION	protein_coding	-	CCDS26552.1	1	188	0	0	13	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000063846	Gm21731	ENSMUST00000223770	ENSMUSP00000153383	TRANSLATION	protein_coding	-	-	-	180	0	0	0	289.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063846	Gm21731	ENSMUST00000079524	ENSMUSP00000137283	TRANSLATION	protein_coding	stop	-	-	163	0	0	0.5	289.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021340	Gpld1	ENSMUST00000223873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021340	Gpld1	ENSMUST00000128315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021340	Gpld1	ENSMUST00000021773	ENSMUSP00000021773	TRANSLATION	protein_coding	-	CCDS26384.1	5	842	20	2.72	1.5	197.7	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000039114	Nrn1	ENSMUST00000122286	ENSMUSP00000113721	TRANSLATION	protein_coding	-	-	3	158	0	0	0	131.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000039114	Nrn1	ENSMUST00000224323	ENSMUSP00000153099	TRANSLATION	protein_coding	-	-	-	151	0	0	0.5	131.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000039114	Nrn1	ENSMUST00000037623	ENSMUSP00000040900	TRANSLATION	protein_coding	-	CCDS26455.1	1	142	0	0	7.5	131.1	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000039114	Nrn1	ENSMUST00000224960	ENSMUSP00000153173	TRANSLATION	protein_coding	stop	-	-	140	0	0	7.5	131.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039114	Nrn1	ENSMUST00000223611	ENSMUSP00000153395	TRANSLATION	protein_coding	-	-	-	94	0	0	0	93.2	0	-4,-5	-	-	3.726	MINOR
ENSMUSG00000094338	H2bc13	ENSMUST00000091756	ENSMUSP00000089350	TRANSLATION	protein_coding	-	CCDS26287.1	-	126	0	1	8.8	92.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071493	Vmn1r208	ENSMUST00000124841	ENSMUSP00000128942	TRANSLATION	protein_coding	-	CCDS36616.1	-	308	0	0	0.5	112.6	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000071493	Vmn1r208	ENSMUST00000227136	ENSMUSP00000153904	TRANSLATION	protein_coding	-	CCDS36616.1	-	308	0	0	0.5	112.6	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000052957	Gas1	ENSMUST00000223933	ENSMUSP00000153311	TRANSLATION	protein_coding	-	CCDS26579.1	-	384	0	0	1.5	23.2	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000052957	Gas1	ENSMUST00000065086	ENSMUSP00000064555	TRANSLATION	protein_coding	-	-	-	343	0	0	0	23.2	0	1,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000047246	H2bc6	ENSMUST00000129312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047246	H2bc6	ENSMUST00000051091	ENSMUSP00000061247	TRANSLATION	protein_coding	-	CCDS26354.1	1	126	0	1	7.5	91.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047246	H2bc6	ENSMUST00000091704	ENSMUSP00000089296	TRANSLATION	protein_coding	-	CCDS26354.1	1	126	0	1	7.5	91.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033063	Cntnap3	ENSMUST00000222618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033063	Cntnap3	ENSMUST00000091554	ENSMUSP00000089140	TRANSLATION	protein_coding	-	CCDS36703.1	5	1287	0	8.36	0.5	355.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021671	Poc5	ENSMUST00000222640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021671	Poc5	ENSMUST00000222792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021671	Poc5	ENSMUST00000223478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021671	Poc5	ENSMUST00000099295	ENSMUSP00000096898	TRANSLATION	protein_coding	-	CCDS26703.1	1	558	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021671	Poc5	ENSMUST00000221039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021759	Plpp1	ENSMUST00000016144	ENSMUSP00000016144	TRANSLATION	protein_coding	-	CCDS26776.1	1	284	8	0	5.4	95.4	6	-2,-5	-	-	14	PRINCIPAL:4
ENSMUSG00000021759	Plpp1	ENSMUST00000070951	ENSMUSP00000064423	TRANSLATION	protein_coding	-	CCDS26777.1	1	283	8	0	5.4	95.4	6	-2,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000046006	Gapt	ENSMUST00000058806	ENSMUSP00000053775	TRANSLATION	protein_coding	-	CCDS26766.1	1	157	0	0	1.5	245.3	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046006	Gapt	ENSMUST00000224534	ENSMUSP00000153170	TRANSLATION	protein_coding	-	CCDS26766.1	-	157	0	0	1.5	245.3	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034686	Prr7	ENSMUST00000046533	ENSMUSP00000046776	TRANSLATION	protein_coding	-	CCDS26546.1	1	269	0	0	2.7	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000033520	Idi2	ENSMUST00000038598	ENSMUSP00000036621	TRANSLATION	protein_coding	-	CCDS26235.1	1	227	13	4	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069117	Rps18-ps6	ENSMUST00000074072	ENSMUSP00000126892	TRANSLATION	protein_coding	-	-	-	152	0	1	14.2	185.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000050423	Ppp1r3g	ENSMUST00000225537	ENSMUSP00000153702	TRANSLATION	protein_coding	-	CCDS49237.1	-	347	0	0.14	1.5	90.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050423	Ppp1r3g	ENSMUST00000172766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050423	Ppp1r3g	ENSMUST00000132661	ENSMUSP00000122712	TRANSLATION	protein_coding	-	CCDS49237.1	1	347	0	0.14	1.5	90.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074863	Platr25	ENSMUST00000223219	ENSMUSP00000152347	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000221999	ENSMUSP00000152406	TRANSLATION	protein_coding	stop	-	2	177	2	2.65	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000220864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074863	Platr25	ENSMUST00000222602	ENSMUSP00000152625	TRANSLATION	protein_coding	-	-	-	312	40	0.8	0	223.7	0	-4,-5	-	-	9.648	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000221996	ENSMUSP00000152117	TRANSLATION	protein_coding	-	-	2	464	42	2.65	0.5	270.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000074863	Platr25	ENSMUST00000223528	ENSMUSP00000152470	TRANSLATION	nonsense_mediated_decay	-	-	3	98	0	1.3	0	79.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000143260	ENSMUSP00000152687	TRANSLATION	protein_coding	-	-	1	95	0	1.3	0	79.1	0	-4,-6	-	-	2.946	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000220733	ENSMUSP00000152199	TRANSLATION	protein_coding	-	-	5	466	42	2.65	0.5	270.9	0	-4,-5	-	-	18	PRINCIPAL:5
ENSMUSG00000074863	Platr25	ENSMUST00000222477	ENSMUSP00000152582	TRANSLATION	protein_coding	-	-	5	432	42	1.9	0	188.9	0	-4,-5	-	-	11.382	MINOR
ENSMUSG00000074863	Platr25	ENSMUST00000222303	ENSMUSP00000152463	TRANSLATION	protein_coding	-	-	5	95	0	1.3	0	79.1	0	-4,-6	-	-	2.946	MINOR
ENSMUSG00000021420	Fars2	ENSMUST00000225048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021420	Fars2	ENSMUST00000224619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021420	Fars2	ENSMUST00000224540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021420	Fars2	ENSMUST00000223796	ENSMUSP00000153209	TRANSLATION	protein_coding	stop	-	-	202	6	1	0	64.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021420	Fars2	ENSMUST00000224357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021420	Fars2	ENSMUST00000225948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021420	Fars2	ENSMUST00000223905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021420	Fars2	ENSMUST00000224916	ENSMUSP00000153019	TRANSLATION	nonsense_mediated_decay	-	-	-	470	19	5.5	0	211.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021420	Fars2	ENSMUST00000224611	ENSMUSP00000153658	TRANSLATION	protein_coding	-	CCDS26453.1	-	451	19	6.5	3.9	249.3	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000021420	Fars2	ENSMUST00000224241	ENSMUSP00000153628	TRANSLATION	protein_coding	-	CCDS26453.1	-	451	19	6.5	3.9	249.3	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000021420	Fars2	ENSMUST00000099582	ENSMUSP00000097177	TRANSLATION	protein_coding	-	CCDS26454.1	1	219	13	4.75	0.5	187.1	0	-4,-5	-	-	6.768	MINOR
ENSMUSG00000021420	Fars2	ENSMUST00000225525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021420	Fars2	ENSMUST00000021857	ENSMUSP00000021857	TRANSLATION	protein_coding	-	CCDS26453.1	1	451	19	6.5	3.9	249.3	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000095909	Gm10324	ENSMUST00000238623	ENSMUSP00000158820	TRANSLATION	protein_coding	stop	-	-	482	57	2.35	0	355.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095909	Gm10324	ENSMUST00000238355	ENSMUSP00000158641	TRANSLATION	protein_coding	-	-	-	64	0	1.75	1.5	79.5	0	-4,-5	-	-	3.198	MINOR
ENSMUSG00000095909	Gm10324	ENSMUST00000092528	ENSMUSP00000090190	TRANSLATION	protein_coding	-	-	5	604	76	3.15	0.5	468.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039242	B3galnt2	ENSMUST00000221333	ENSMUSP00000152671	TRANSLATION	protein_coding	start/stop	-	5	201	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039242	B3galnt2	ENSMUST00000222420	ENSMUSP00000152723	TRANSLATION	protein_coding	start	-	3	124	0	0	0	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039242	B3galnt2	ENSMUST00000221300	ENSMUSP00000152755	TRANSLATION	protein_coding	-	CCDS26246.1	1	504	0	0	1.5	87.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000039242	B3galnt2	ENSMUST00000220681	ENSMUSP00000152239	TRANSLATION	protein_coding	start	-	3	251	0	0	0	87.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039242	B3galnt2	ENSMUST00000221764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039242	B3galnt2	ENSMUST00000222110	ENSMUSP00000152720	TRANSLATION	nonsense_mediated_decay	-	-	5	123	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000039242	B3galnt2	ENSMUST00000223483	ENSMUSP00000152457	TRANSLATION	nonsense_mediated_decay	-	-	1	143	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000039242	B3galnt2	ENSMUST00000223307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039242	B3galnt2	ENSMUST00000099747	ENSMUSP00000097336	TRANSLATION	protein_coding	-	CCDS26246.1	1	504	0	0	1.5	87.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000039242	B3galnt2	ENSMUST00000223389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039242	B3galnt2	ENSMUST00000220932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039242	B3galnt2	ENSMUST00000221974	ENSMUSP00000152397	TRANSLATION	protein_coding	-	CCDS26246.1	1	504	0	0	1.5	87.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000056457	Prl2c3	ENSMUST00000099805	ENSMUSP00000097393	TRANSLATION	protein_coding	-	CCDS36595.1	1	224	0	3.41	0.5	246.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056457	Prl2c3	ENSMUST00000223180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056457	Prl2c3	ENSMUST00000223098	ENSMUSP00000152309	TRANSLATION	protein_coding	stop	-	3	132	0	2.2	0	124.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056457	Prl2c3	ENSMUST00000222139	ENSMUSP00000152614	TRANSLATION	protein_coding	stop	-	2	159	0	2.85	0	168.1	0	2,-3	-	-	-1	MINOR
ENSMUSG00000056457	Prl2c3	ENSMUST00000222621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006711	D130043K22Rik	ENSMUST00000169411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006711	D130043K22Rik	ENSMUST00000006893	ENSMUSP00000006893	TRANSLATION	protein_coding	-	CCDS36624.1	1	1081	4	5	1.5	22.4	0	3,-2	-	-	15.796	PRINCIPAL:1
ENSMUSG00000006711	D130043K22Rik	ENSMUST00000171262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006711	D130043K22Rik	ENSMUST00000141572	ENSMUSP00000116004	TRANSLATION	nonsense_mediated_decay	-	-	1	782	4	5	0	23.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000052087	Rgs14	ENSMUST00000063771	ENSMUSP00000068731	TRANSLATION	protein_coding	-	CCDS36674.1	1	547	0	8.45	1.5	233.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000052087	Rgs14	ENSMUST00000149858	ENSMUSP00000121508	TRANSLATION	nonsense_mediated_decay	-	-	3	82	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052087	Rgs14	ENSMUST00000224185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052087	Rgs14	ENSMUST00000135851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038014	Fam120a	ENSMUST00000060805	ENSMUSP00000053877	TRANSLATION	protein_coding	-	CCDS49259.1	1	1112	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021423	Ly86	ENSMUST00000225716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021423	Ly86	ENSMUST00000021860	ENSMUSP00000021860	TRANSLATION	protein_coding	-	CCDS26457.1	1	162	0	4	2.9	23.4	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038372	Gmds	ENSMUST00000178294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038372	Gmds	ENSMUST00000179717	ENSMUSP00000136223	TRANSLATION	nonsense_mediated_decay	-	-	5	50	5	1.3	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038372	Gmds	ENSMUST00000178313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038372	Gmds	ENSMUST00000041859	ENSMUSP00000036696	TRANSLATION	protein_coding	-	CCDS26426.1	1	372	45	9.55	6.3	548.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038683	Pak1ip1	ENSMUST00000174551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038683	Pak1ip1	ENSMUST00000173238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038683	Pak1ip1	ENSMUST00000174472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038683	Pak1ip1	ENSMUST00000174527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038683	Pak1ip1	ENSMUST00000046951	ENSMUSP00000040846	TRANSLATION	protein_coding	-	CCDS36638.1	1	382	0	5.16	0.5	79	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048368	Omd	ENSMUST00000065494	ENSMUSP00000065706	TRANSLATION	protein_coding	-	CCDS26504.1	1	423	0	1	1.5	121.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000048368	Omd	ENSMUST00000221170	ENSMUSP00000152066	TRANSLATION	protein_coding	-	CCDS26504.1	1	423	0	1	1.5	121.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000116016	Gm49496	ENSMUST00000231096	ENSMUSP00000155119	TRANSLATION	protein_coding,RT	stop	-	-	246	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000042167	Tent2	ENSMUST00000225868	ENSMUSP00000153703	TRANSLATION	protein_coding	-	-	-	480	18	7.02	7.5	54.4	0	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000042167	Tent2	ENSMUST00000048702	ENSMUSP00000048124	TRANSLATION	protein_coding	-	CCDS26686.1	1	484	18	7.02	7.5	54.4	0	-4,-2	-	-	21	PRINCIPAL:2
ENSMUSG00000042167	Tent2	ENSMUST00000224464	ENSMUSP00000153060	TRANSLATION	protein_coding	stop	-	-	155	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042167	Tent2	ENSMUST00000226081	ENSMUSP00000153685	TRANSLATION	protein_coding	start	-	-	99	7	2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042167	Tent2	ENSMUST00000223975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042167	Tent2	ENSMUST00000224545	ENSMUSP00000153339	TRANSLATION	nonsense_mediated_decay	-	-	-	158	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016018	Mtrex	ENSMUST00000225997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016018	Mtrex	ENSMUST00000223559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016018	Mtrex	ENSMUST00000224266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016018	Mtrex	ENSMUST00000225037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016018	Mtrex	ENSMUST00000022281	ENSMUSP00000022281	TRANSLATION	protein_coding	-	CCDS26778.1	1	1040	13	21.18	7.5	593.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016018	Mtrex	ENSMUST00000224639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063021	H2ac15	ENSMUST00000074752	ENSMUSP00000074310	TRANSLATION	protein_coding	-	CCDS26293.1	-	130	0	1	7.5	134.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094918	Gm8765	ENSMUST00000099518	ENSMUSP00000097118	TRANSLATION	protein_coding	-	CCDS70456.1	1	1017	0	0	0.5	49.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000006720	Zfp184	ENSMUST00000102978	ENSMUSP00000100043	TRANSLATION	protein_coding	-	CCDS26302.1	5	737	75	1.4	1.5	479.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006720	Zfp184	ENSMUST00000176580	ENSMUSP00000135404	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	1	0	81.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006720	Zfp184	ENSMUST00000176511	ENSMUSP00000135173	TRANSLATION	protein_coding	-	CCDS26302.1	1	737	75	1.4	1.5	479.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006720	Zfp184	ENSMUST00000006903	ENSMUSP00000006903	TRANSLATION	protein_coding	-	CCDS26302.1	5	737	75	1.4	1.5	479.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000006720	Zfp184	ENSMUST00000152258	ENSMUSP00000135102	TRANSLATION	protein_coding	stop	-	5	99	0	1	0	82.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006720	Zfp184	ENSMUST00000176003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006717	Acot13	ENSMUST00000224839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006717	Acot13	ENSMUST00000006900	ENSMUSP00000006900	TRANSLATION	protein_coding	-	CCDS26380.1	1	140	17	2.75	5.1	64.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000057396	Zfp759	ENSMUST00000224426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057396	Zfp759	ENSMUST00000224346	ENSMUSP00000153653	TRANSLATION	protein_coding	stop	-	-	124	3	0	0	67.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057396	Zfp759	ENSMUST00000052716	ENSMUSP00000049650	TRANSLATION	protein_coding	-	CCDS49299.1	1	721	81	0.8	0.5	383.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000036658	Olfr11	ENSMUST00000205631	ENSMUSP00000146091	TRANSLATION	protein_coding	-	CCDS26283.1	3	313	0	0.42	6.3	169.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036658	Olfr11	ENSMUST00000043081	ENSMUSP00000043099	TRANSLATION	protein_coding	-	CCDS26283.1	-	313	0	0.42	6.3	169.5	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000091183	Gm5141	ENSMUST00000201047	ENSMUSP00000144368	TRANSLATION	protein_coding	-	CCDS79203.1	1	581	63	1.85	0.5	421.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000091183	Gm5141	ENSMUST00000202582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091183	Gm5141	ENSMUST00000167516	ENSMUSP00000126604	TRANSLATION	protein_coding	start	-	5	580	63	1.85	0.5	421.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045827	Serpinb9	ENSMUST00000063191	ENSMUSP00000099002	TRANSLATION	protein_coding	-	CCDS26431.1	5	374	0	6	1.5	428.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045827	Serpinb9	ENSMUST00000006391	ENSMUSP00000006391	TRANSLATION	protein_coding	-	CCDS26431.1	1	374	0	6	1.5	428.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049658	Bdp1	ENSMUST00000038104	ENSMUSP00000038321	TRANSLATION	protein_coding	-	CCDS49343.1	5	2467	0	0	0.5	95.5	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000049658	Bdp1	ENSMUST00000105697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049658	Bdp1	ENSMUST00000099262	ENSMUSP00000096868	TRANSLATION	nonsense_mediated_decay	start	-	1	325	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049658	Bdp1	ENSMUST00000167815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049658	Bdp1	ENSMUST00000163097	ENSMUSP00000126435	TRANSLATION	nonsense_mediated_decay	-	-	3	128	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000049658	Bdp1	ENSMUST00000167203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049658	Bdp1	ENSMUST00000109379	ENSMUSP00000105005	TRANSLATION	protein_coding	-	-	5	2471	0	0	0.5	95.5	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000016477	E2f3	ENSMUST00000221536	ENSMUSP00000152782	TRANSLATION	protein_coding	-	-	1	340	0	3.572	4.2	206	0	-4,-6	-	-	13.488	PRINCIPAL:5
ENSMUSG00000016477	E2f3	ENSMUST00000222730	ENSMUSP00000152368	TRANSLATION	protein_coding	-	-	1	334	0	3.44	5.3	206	0	-4,-5	-	-	13.736	ALTERNATIVE:1
ENSMUSG00000016477	E2f3	ENSMUST00000102948	ENSMUSP00000100012	TRANSLATION	protein_coding	-	CCDS26413.1	1	457	0	3.572	1.8	206	0	-4,-5	-	-	12.372	MINOR
ENSMUSG00000016477	E2f3	ENSMUST00000146092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114133	Gm20075	ENSMUST00000220449	ENSMUSP00000152074	TRANSLATION	protein_coding	-	-	-	158	0	0.8	21.5	89	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021519	Mterf3	ENSMUST00000174339	ENSMUSP00000134286	TRANSLATION	protein_coding	stop	-	2	123	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000173407	ENSMUSP00000133594	TRANSLATION	nonsense_mediated_decay	-	-	5	150	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000224085	ENSMUSP00000152951	TRANSLATION	nonsense_mediated_decay	-	-	-	158	0	0.65	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000173773	ENSMUSP00000133596	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000173910	ENSMUSP00000133456	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000172597	ENSMUSP00000133433	TRANSLATION	protein_coding	stop	-	5	204	5	1.65	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000223875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021519	Mterf3	ENSMUST00000172807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021519	Mterf3	ENSMUST00000173062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021519	Mterf3	ENSMUST00000174134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021519	Mterf3	ENSMUST00000173158	ENSMUSP00000134032	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000173891	ENSMUSP00000133330	TRANSLATION	protein_coding	start	-	5	90	0	1.48	0	32.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021519	Mterf3	ENSMUST00000021991	ENSMUSP00000021991	TRANSLATION	protein_coding	-	CCDS26611.1	1	412	5	5.98	0.5	99.3	0	-4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000021519	Mterf3	ENSMUST00000174011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076746	Trgv6	ENSMUST00000198330	ENSMUSP00000142811	TRANSLATION	TR_V_gene	stop	-	-	121	0	0.6	0	55.5	0	0,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076746	Trgv6	ENSMUST00000103555	ENSMUSP00000100336	TRANSLATION	TR_V_gene	stop	-	-	134	0	0.6	0	55.5	0	0,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000021604	Irx4	ENSMUST00000176684	ENSMUSP00000134738	TRANSLATION	protein_coding	-	CCDS26629.1	5	515	0	0.6	1.5	56.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021604	Irx4	ENSMUST00000022095	ENSMUSP00000022095	TRANSLATION	protein_coding	-	CCDS26629.1	1	515	0	0.6	1.5	56.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000006715	Gmnn	ENSMUST00000175689	ENSMUSP00000135823	TRANSLATION	protein_coding	stop	-	5	199	0	5.3	0	258.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006715	Gmnn	ENSMUST00000176890	ENSMUSP00000135006	TRANSLATION	protein_coding	stop	-	5	167	0	4.3	0	247.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006715	Gmnn	ENSMUST00000110382	ENSMUSP00000106011	TRANSLATION	protein_coding	-	CCDS26378.1	1	206	0	5.63	3.9	258.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000006715	Gmnn	ENSMUST00000006898	ENSMUSP00000006898	TRANSLATION	protein_coding	-	CCDS26378.1	1	206	0	5.63	3.9	258.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000006715	Gmnn	ENSMUST00000177253	ENSMUSP00000134986	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021313	Ryr2	ENSMUST00000222386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000220712	ENSMUSP00000152669	TRANSLATION	protein_coding	start/stop	-	5	369	0	8.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021313	Ryr2	ENSMUST00000222788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000222113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000170156	ENSMUSP00000127991	TRANSLATION	protein_coding	-	-	5	4966	4	81.121	0	2008.2	0	-4,-5	-	-	15.274	ALTERNATIVE:2
ENSMUSG00000021313	Ryr2	ENSMUST00000220597	ENSMUSP00000152051	TRANSLATION	protein_coding	-	-	1	1020	0	22.5	0	854.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021313	Ryr2	ENSMUST00000221609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000021750	ENSMUSP00000021750	TRANSLATION	protein_coding	-	CCDS49206.1	1	4966	4	81.385	0.5	2011.5	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000021313	Ryr2	ENSMUST00000221941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000221527	ENSMUSP00000152510	TRANSLATION	protein_coding	start/stop	-	5	1028	4	11.625	0	447	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021313	Ryr2	ENSMUST00000221890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000221916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000221018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021313	Ryr2	ENSMUST00000221341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046949	Nqo2	ENSMUST00000021843	ENSMUSP00000021843	TRANSLATION	protein_coding	-	CCDS26442.1	1	231	22	6	3.9	180.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000046949	Nqo2	ENSMUST00000220844	ENSMUSP00000152068	TRANSLATION	protein_coding	-	-	1	187	16	5	2.9	130.2	0	-4,-6	-	-	9.649	MINOR
ENSMUSG00000046949	Nqo2	ENSMUST00000058978	ENSMUSP00000053809	TRANSLATION	protein_coding	-	CCDS26442.1	1	231	22	6	3.9	180.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000046949	Nqo2	ENSMUST00000222740	ENSMUSP00000152294	TRANSLATION	protein_coding	-	CCDS26442.1	1	231	22	6	3.9	180.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000046949	Nqo2	ENSMUST00000223479	ENSMUSP00000152598	TRANSLATION	protein_coding	stop	-	3	187	18	5	0	172.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021385	Ippk	ENSMUST00000220856	ENSMUSP00000152655	TRANSLATION	nonsense_mediated_decay	-	-	1	68	8	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021385	Ippk	ENSMUST00000021817	ENSMUSP00000021817	TRANSLATION	protein_coding	-	-	1	538	23	3.5	0.5	298.9	0	-3,-1	-	-	10.53	MINOR
ENSMUSG00000021385	Ippk	ENSMUST00000220447	ENSMUSP00000152331	TRANSLATION	protein_coding	-	CCDS26500.1	1	489	31	4.1	7.5	314.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021494	Ddx41	ENSMUST00000225783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021494	Ddx41	ENSMUST00000021956	ENSMUSP00000021956	TRANSLATION	protein_coding	-	CCDS26549.1	1	622	14	10.85	7.5	254	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021494	Ddx41	ENSMUST00000224686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021494	Ddx41	ENSMUST00000224125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021494	Ddx41	ENSMUST00000224765	ENSMUSP00000153348	TRANSLATION	protein_coding	-	-	-	633	14	10.85	0	254	0	-4,-5	-	-	18	MINOR
ENSMUSG00000114763	Gm49354	ENSMUST00000225581	ENSMUSP00000153636	TRANSLATION	protein_coding,RT	start	-	-	88	4	0	0	102.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021215	Net1	ENSMUST00000222442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021215	Net1	ENSMUST00000220887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021215	Net1	ENSMUST00000222017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021215	Net1	ENSMUST00000091853	ENSMUSP00000089464	TRANSLATION	protein_coding	-	CCDS26216.1	1	595	0	7.1	2.7	150.3	0	-4,-7	-	-	12.586	PRINCIPAL:3
ENSMUSG00000021215	Net1	ENSMUST00000222504	ENSMUSP00000152173	TRANSLATION	protein_coding	-	-	3	44	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021215	Net1	ENSMUST00000223258	ENSMUSP00000152333	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021215	Net1	ENSMUST00000099946	ENSMUSP00000097529	TRANSLATION	protein_coding	-	CCDS36583.1	1	541	0	7.1	3.9	150.3	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000034918	Cdhr2	ENSMUST00000037145	ENSMUSP00000043596	TRANSLATION	protein_coding	-	CCDS36669.1	1	1308	71	13.81	1.5	301.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000041747	Utp15	ENSMUST00000224842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041747	Utp15	ENSMUST00000225100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041747	Utp15	ENSMUST00000040972	ENSMUSP00000048204	TRANSLATION	protein_coding	-	CCDS26712.1	1	528	0	5.33	1.5	245.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058093	Zfp729b	ENSMUST00000223599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058093	Zfp729b	ENSMUST00000138725	ENSMUSP00000115783	TRANSLATION	protein_coding	stop	-	3	248	16	2	0	155	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058093	Zfp729b	ENSMUST00000012873	ENSMUSP00000012873	TRANSLATION	protein_coding	-	CCDS56892.1	1	1045	120	1.8	0.5	542	0	-4,-5	-	-	17.4	PRINCIPAL:1
ENSMUSG00000053216	Btn2a2	ENSMUST00000110432	ENSMUSP00000106062	TRANSLATION	protein_coding	-	CCDS36619.1	1	514	0	6.792	0.5	186.7	2	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000053216	Btn2a2	ENSMUST00000110433	ENSMUSP00000106063	TRANSLATION	protein_coding	-	CCDS36619.1	1	514	0	6.792	0.5	186.7	2	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000053216	Btn2a2	ENSMUST00000223877	ENSMUSP00000153680	TRANSLATION	protein_coding	-	-	-	505	0	6.528	0.5	186.7	2	3,-2	-	-	11.472	ALTERNATIVE:2
ENSMUSG00000053216	Btn2a2	ENSMUST00000041541	ENSMUSP00000048251	TRANSLATION	protein_coding	-	-	2	417	0	4.678	0	137	2	3,-2	-	-	4.788	MINOR
ENSMUSG00000038025	Phf2	ENSMUST00000035540	ENSMUSP00000047308	TRANSLATION	protein_coding	-	CCDS26496.1	1	1096	24	10.5	0.5	83	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021597	Slf1	ENSMUST00000151524	ENSMUSP00000118312	TRANSLATION	protein_coding	-	CCDS26657.2	5	1054	0	4.08	0.5	96.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021597	Slf1	ENSMUST00000159300	ENSMUSP00000124865	TRANSLATION	protein_coding	stop	-	3	289	0	1.76	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021597	Slf1	ENSMUST00000162320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021597	Slf1	ENSMUST00000159462	ENSMUSP00000124543	TRANSLATION	protein_coding	stop	-	1	266	0	1.76	0	41.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021597	Slf1	ENSMUST00000162005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021597	Slf1	ENSMUST00000162921	ENSMUSP00000124946	TRANSLATION	nonsense_mediated_decay	-	-	5	175	0	1.56	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021597	Slf1	ENSMUST00000162944	ENSMUSP00000123982	TRANSLATION	nonsense_mediated_decay	-	-	1	175	0	1.56	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000238722	ENSMUSP00000158831	TRANSLATION	protein_coding	start/stop	-	-	167	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000056978	ENSMUSP00000055304	TRANSLATION	protein_coding	-	CCDS36652.1	1	1749	11	15.66	1.5	646.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021375	Kif13a	ENSMUST00000224923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021375	Kif13a	ENSMUST00000224457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021375	Kif13a	ENSMUST00000223881	ENSMUSP00000153657	TRANSLATION	protein_coding	start	-	-	801	0	0	0	105.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000225591	ENSMUSP00000153614	TRANSLATION	protein_coding	stop	-	-	1041	8	14.03	0	548.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000223856	ENSMUSP00000152982	TRANSLATION	protein_coding	start/stop	-	-	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000225836	ENSMUSP00000153536	TRANSLATION	protein_coding	start	-	-	164	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000224756	ENSMUSP00000153385	TRANSLATION	protein_coding	start/stop	-	-	229	0	0	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021375	Kif13a	ENSMUST00000225904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094248	Hist1h2ao	ENSMUST00000091745	ENSMUSP00000089339	TRANSLATION	protein_coding	-	CCDS49214.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059395	Nkapl	ENSMUST00000068235	ENSMUSP00000065168	TRANSLATION	protein_coding	-	CCDS26276.1	-	395	0	0	0.5	167.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021614	Vcan	ENSMUST00000159910	ENSMUSP00000125446	TRANSLATION	protein_coding	-	CCDS49323.1	5	2394	26	6.69	0.5	445.3	0	1,-3	-	-	17.88	MINOR
ENSMUSG00000021614	Vcan	ENSMUST00000159337	ENSMUSP00000125432	TRANSLATION	protein_coding	-	CCDS49321.1	1	368	0	1.36	0.5	284.9	0	1,-3	-	-	0	MINOR
ENSMUSG00000021614	Vcan	ENSMUST00000109546	ENSMUSP00000105173	TRANSLATION	protein_coding	-	CCDS36740.1	1	3354	26	6.69	0.5	445.3	0	1,-3	-	-	17.88	MINOR
ENSMUSG00000021614	Vcan	ENSMUST00000160029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021614	Vcan	ENSMUST00000109543	ENSMUSP00000105170	TRANSLATION	protein_coding	-	CCDS49322.1	1	655	26	6.69	3.9	447.3	0	1,-3	-	-	19	PRINCIPAL:3
ENSMUSG00000021614	Vcan	ENSMUST00000159285	ENSMUSP00000125674	TRANSLATION	protein_coding	start/stop	-	5	98	12	2.53	0	43.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021614	Vcan	ENSMUST00000109544	ENSMUSP00000105171	TRANSLATION	protein_coding	-	CCDS49324.1	5	1615	26	6.69	0.5	447.3	0	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000021614	Vcan	ENSMUST00000162715	ENSMUSP00000125521	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	29.7	0	1,-3	-	-	-1	MINOR
ENSMUSG00000021614	Vcan	ENSMUST00000160740	ENSMUSP00000125694	TRANSLATION	protein_coding	start	-	2	141	11	1.83	0	63.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000253	Gmpr	ENSMUST00000128873	ENSMUSP00000120825	TRANSLATION	protein_coding	start/stop	-	5	290	32	6.48	0	211.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000253	Gmpr	ENSMUST00000000260	ENSMUSP00000000260	TRANSLATION	protein_coding	-	CCDS26482.1	1	345	38	8.08	14.2	272.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000000253	Gmpr	ENSMUST00000222227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000253	Gmpr	ENSMUST00000129176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074824	Rslcan18	ENSMUST00000091526	ENSMUSP00000089111	TRANSLATION	protein_coding	-	CCDS56890.1	5	460	38	0.8	0.5	268.7	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000074824	Rslcan18	ENSMUST00000189620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044734	Serpinb1a	ENSMUST00000076352	ENSMUSP00000075690	TRANSLATION	protein_coding	-	CCDS26428.1	1	379	0	6	8.1	444.2	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044734	Serpinb1a	ENSMUST00000223016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044734	Serpinb1a	ENSMUST00000221967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044734	Serpinb1a	ENSMUST00000091668	ENSMUSP00000089257	TRANSLATION	protein_coding	stop	-	3	188	0	4	0	211.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000025872	Thoc3	ENSMUST00000151158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025872	Thoc3	ENSMUST00000026990	ENSMUSP00000026990	TRANSLATION	protein_coding	-	CCDS26527.1	1	351	0	3.84	7.5	96.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025872	Thoc3	ENSMUST00000135404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002808	Epdr1	ENSMUST00000221014	ENSMUSP00000152111	TRANSLATION	protein_coding	-	-	1	90	0	0	1.2	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000002808	Epdr1	ENSMUST00000220755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002808	Epdr1	ENSMUST00000002885	ENSMUSP00000002885	TRANSLATION	protein_coding	-	CCDS26260.1	1	224	0	0	2.7	129.7	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000002808	Epdr1	ENSMUST00000220944	ENSMUSP00000152124	TRANSLATION	protein_coding	-	-	3	122	0	0	1.2	113.9	0	-4,-5	-	-	5.052	MINOR
ENSMUSG00000037960	Card19	ENSMUST00000223159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037960	Card19	ENSMUST00000048946	ENSMUSP00000047569	TRANSLATION	protein_coding	-	CCDS49260.1	1	183	0	2	7.5	24.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037960	Card19	ENSMUST00000223496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037960	Card19	ENSMUST00000222733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037960	Card19	ENSMUST00000221443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021400	Wrnip1	ENSMUST00000230949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021400	Wrnip1	ENSMUST00000221066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021400	Wrnip1	ENSMUST00000220560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021400	Wrnip1	ENSMUST00000229351	ENSMUSP00000154988	TRANSLATION	nonsense_mediated_decay	start	-	-	25	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021400	Wrnip1	ENSMUST00000021832	ENSMUSP00000021832	TRANSLATION	protein_coding	-	CCDS26427.1	1	660	12	4.44	1.5	145.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042082	Arsb	ENSMUST00000220652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042082	Arsb	ENSMUST00000091403	ENSMUSP00000088964	TRANSLATION	protein_coding	-	CCDS36749.1	1	534	10	7.75	2.9	254.3	0	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025877	Hk3	ENSMUST00000052949	ENSMUSP00000051215	TRANSLATION	protein_coding	-	CCDS26538.1	1	922	50	18.144	3.9	927.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000025877	Hk3	ENSMUST00000132309	ENSMUSP00000117254	TRANSLATION	nonsense_mediated_decay	-	-	1	167	4	3.028	0	95.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025877	Hk3	ENSMUST00000149644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025877	Hk3	ENSMUST00000148221	ENSMUSP00000119357	TRANSLATION	protein_coding	stop	-	2	65	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025877	Hk3	ENSMUST00000135983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025877	Hk3	ENSMUST00000123097	ENSMUSP00000116717	TRANSLATION	protein_coding	-	CCDS56884.1	1	877	48	17.144	0.5	897.7	0	-4,-5	-	-	12.87	MINOR
ENSMUSG00000025877	Hk3	ENSMUST00000153665	ENSMUSP00000115227	TRANSLATION	protein_coding	-	CCDS56883.1	1	867	50	17.544	2.9	907.7	0	-4,-6	-	-	16.255	MINOR
ENSMUSG00000025877	Hk3	ENSMUST00000126234	ENSMUSP00000123233	TRANSLATION	protein_coding	-	CCDS26538.1	1	922	50	18.144	3.9	927.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000060639	H4c9	ENSMUST00000102977	ENSMUSP00000100042	TRANSLATION	protein_coding	-	CCDS26306.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000094898	Vmn1r201	ENSMUST00000226330	ENSMUSP00000154490	TRANSLATION	protein_coding	-	CCDS26319.1	-	300	0	0	0.5	134.5	5	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000094898	Vmn1r201	ENSMUST00000226965	ENSMUSP00000154790	TRANSLATION	protein_coding	-	CCDS26319.1	-	300	0	0	0.5	134.5	5	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000094898	Vmn1r201	ENSMUST00000091730	ENSMUSP00000089324	TRANSLATION	protein_coding	-	CCDS26319.1	-	300	0	0	0.5	134.5	5	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000069248	Serpinb6e	ENSMUST00000110275	ENSMUSP00000105904	TRANSLATION	protein_coding	-	CCDS26440.2	5	429	0	5.2	0.5	394.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069248	Serpinb6e	ENSMUST00000145221	ENSMUSP00000117577	TRANSLATION	protein_coding	stop	-	3	101	0	0.6	0	30.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036110	Slc17a2	ENSMUST00000141717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036110	Slc17a2	ENSMUST00000099697	ENSMUSP00000097288	TRANSLATION	protein_coding	-	-	5	478	0	0	3.9	150.7	10	-4,-7	-	-	7	ALTERNATIVE:2
ENSMUSG00000036110	Slc17a2	ENSMUST00000006786	ENSMUSP00000006786	TRANSLATION	protein_coding	-	CCDS36620.1	1	447	0	0	1.5	150.7	9	-4,-7	-	-	6.172	PRINCIPAL:2
ENSMUSG00000036110	Slc17a2	ENSMUST00000139572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003062	Stard3nl	ENSMUST00000199924	ENSMUSP00000143262	TRANSLATION	protein_coding	stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003062	Stard3nl	ENSMUST00000222869	ENSMUSP00000152373	TRANSLATION	protein_coding	-	-	5	225	0	0	0	137.6	5	-4,-6	-	-	1.44	MINOR
ENSMUSG00000003062	Stard3nl	ENSMUST00000199278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003062	Stard3nl	ENSMUST00000196268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003062	Stard3nl	ENSMUST00000196712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003062	Stard3nl	ENSMUST00000221380	ENSMUSP00000152371	TRANSLATION	protein_coding	-	-	5	265	0	0	0	213.6	5	-4,-6	-	-	6	MINOR
ENSMUSG00000003062	Stard3nl	ENSMUST00000039694	ENSMUSP00000037991	TRANSLATION	protein_coding	-	CCDS26259.1	1	235	0	0	13.5	213.6	5	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000003062	Stard3nl	ENSMUST00000197565	ENSMUSP00000152747	TRANSLATION	protein_coding	-	CCDS26259.1	5	235	0	0	13.5	213.6	5	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000003062	Stard3nl	ENSMUST00000196537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003062	Stard3nl	ENSMUST00000200323	ENSMUSP00000142680	TRANSLATION	protein_coding	-	CCDS84008.1	1	263	0	0	0.5	213.6	5	-4,-6	-	-	6	MINOR
ENSMUSG00000050295	Foxc1	ENSMUST00000062292	ENSMUSP00000052196	TRANSLATION	protein_coding	-	CCDS26425.1	-	553	0	0.4	1.5	137.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109561	Ankrd31	ENSMUST00000207464	ENSMUSP00000146751	TRANSLATION	protein_coding	-	-	5	1545	0	4.75	0	106.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109561	Ankrd31	ENSMUST00000208758	ENSMUSP00000146720	TRANSLATION	protein_coding	-	-	5	1765	0	4.15	0	89.5	0	-4,-5	-	-	9.774	MINOR
ENSMUSG00000109561	Ankrd31	ENSMUST00000208004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021569	Trip13	ENSMUST00000223017	ENSMUSP00000152604	TRANSLATION	nonsense_mediated_decay	start	-	1	80	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021569	Trip13	ENSMUST00000222156	ENSMUSP00000152724	TRANSLATION	nonsense_mediated_decay	start	-	1	23	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021569	Trip13	ENSMUST00000022053	ENSMUSP00000022053	TRANSLATION	protein_coding	-	CCDS26637.1	1	432	14	6.466	8.8	106.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000053101	Gpr141	ENSMUST00000065335	ENSMUSP00000066921	TRANSLATION	protein_coding	-	CCDS26264.1	1	305	0	0.6	5.3	34.4	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000053101	Gpr141	ENSMUST00000221268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053101	Gpr141	ENSMUST00000222772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053101	Gpr141	ENSMUST00000222664	ENSMUSP00000152482	TRANSLATION	protein_coding	stop	-	2	113	0	0.6	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000021704	Mtx3	ENSMUST00000223719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021704	Mtx3	ENSMUST00000224368	ENSMUSP00000153602	TRANSLATION	nonsense_mediated_decay	start	-	-	68	0	0	0	26.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021704	Mtx3	ENSMUST00000076169	ENSMUSP00000075526	TRANSLATION	protein_coding	-	CCDS49328.1	5	312	0	0	10.8	188.7	0	-3,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000076750	Trgv3	ENSMUST00000103559	ENSMUSP00000100339	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.3	0	59	0	2,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076750	Trgv3	ENSMUST00000198663	ENSMUSP00000142927	TRANSLATION	TR_V_gene	stop	-	-	117	0	1.3	0	59	0	1,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000064140	Trim38	ENSMUST00000226039	ENSMUSP00000153240	TRANSLATION	protein_coding	-	CCDS26370.1	-	471	16	3.464	0.5	170.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000064140	Trim38	ENSMUST00000074067	ENSMUSP00000073709	TRANSLATION	protein_coding	-	CCDS26370.1	1	471	16	3.464	0.5	170.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000064140	Trim38	ENSMUST00000223911	ENSMUSP00000153540	TRANSLATION	nonsense_mediated_decay	-	-	-	249	16	2	0	70.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021451	Sema4d	ENSMUST00000139865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000139018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000139858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000146922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000155896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000110040	ENSMUSP00000105667	TRANSLATION	protein_coding	-	CCDS26514.1	1	861	0	13.01	1.5	565.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021451	Sema4d	ENSMUST00000021900	ENSMUSP00000021900	TRANSLATION	protein_coding	-	CCDS26514.1	1	861	0	13.01	1.5	565.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021451	Sema4d	ENSMUST00000110042	ENSMUSP00000105669	TRANSLATION	protein_coding	start	-	5	185	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021451	Sema4d	ENSMUST00000143396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000138228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000150662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000125511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021451	Sema4d	ENSMUST00000146238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021451	Sema4d	ENSMUST00000110039	ENSMUSP00000105666	TRANSLATION	protein_coding	-	CCDS26514.1	1	861	0	13.01	1.5	565.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000019756	Prl8a1	ENSMUST00000095926	ENSMUSP00000093616	TRANSLATION	protein_coding	-	-	1	209	0	2.35	0	135.4	0	1,-4	-	-	6.84	MINOR
ENSMUSG00000019756	Prl8a1	ENSMUST00000006664	ENSMUSP00000006664	TRANSLATION	protein_coding	-	CCDS26401.1	1	240	0	3.15	1.5	194.7	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000052565	H1f3	ENSMUST00000045301	ENSMUSP00000044395	TRANSLATION	protein_coding	-	CCDS26346.1	-	221	0	0.6	0.5	81.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069206	Zfp874a	ENSMUST00000224239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069206	Zfp874a	ENSMUST00000225778	ENSMUSP00000153239	TRANSLATION	protein_coding	start	-	-	158	0	0.2	0	73.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069206	Zfp874a	ENSMUST00000225479	ENSMUSP00000153515	TRANSLATION	protein_coding	-	-	-	141	0	0.2	0	73.2	0	-4,-5	-	-	0.468	MINOR
ENSMUSG00000069206	Zfp874a	ENSMUST00000057241	ENSMUSP00000077307	TRANSLATION	protein_coding	-	-	1	143	0	0	0	73.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069206	Zfp874a	ENSMUST00000223682	ENSMUSP00000153092	TRANSLATION	nonsense_mediated_decay	-	-	-	81	0	0	0	73.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069206	Zfp874a	ENSMUST00000180580	ENSMUSP00000137953	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	0	0	73.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069206	Zfp874a	ENSMUST00000225389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069206	Zfp874a	ENSMUST00000075255	ENSMUSP00000074735	TRANSLATION	protein_coding	-	CCDS56891.1	1	447	43	2.55	0.5	268.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069206	Zfp874a	ENSMUST00000225414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021758	Ddx4	ENSMUST00000075748	ENSMUSP00000075157	TRANSLATION	protein_coding	-	CCDS26774.1	1	702	14	8.6	0.5	270.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021758	Ddx4	ENSMUST00000099166	ENSMUSP00000096769	TRANSLATION	protein_coding	-	CCDS49366.1	1	728	14	8.6	0.5	270.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000049115	Agtr1a	ENSMUST00000222370	ENSMUSP00000152133	TRANSLATION	protein_coding	stop	-	3	60	0	1.96	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000049115	Agtr1a	ENSMUST00000223201	ENSMUSP00000152265	TRANSLATION	protein_coding	stop	-	3	20	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049115	Agtr1a	ENSMUST00000066412	ENSMUSP00000070958	TRANSLATION	protein_coding	-	CCDS26415.1	1	359	0	2.96	7.6	173.8	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049115	Agtr1a	ENSMUST00000143181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049115	Agtr1a	ENSMUST00000222503	ENSMUSP00000152873	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049115	Agtr1a	ENSMUST00000221743	ENSMUSP00000152634	TRANSLATION	protein_coding	stop	-	2	51	0	1.63	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000021485	Mxd3	ENSMUST00000141644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021485	Mxd3	ENSMUST00000225561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021485	Mxd3	ENSMUST00000021941	ENSMUSP00000021941	TRANSLATION	protein_coding	-	CCDS26543.1	1	206	0	1.73	7.5	39.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000021485	Mxd3	ENSMUST00000146181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022228	Zscan26	ENSMUST00000110485	ENSMUSP00000106111	TRANSLATION	protein_coding	-	CCDS84009.1	5	466	28	1.8	0.5	275.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022228	Zscan26	ENSMUST00000032820	ENSMUSP00000032820	TRANSLATION	protein_coding	-	CCDS49211.1	3	340	28	0.8	0.5	149.8	0	-4,-7	-	-	8.664	MINOR
ENSMUSG00000021706	Zfyve16	ENSMUST00000156586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021706	Zfyve16	ENSMUST00000022217	ENSMUSP00000022217	TRANSLATION	protein_coding	-	CCDS26682.1	1	1528	8	11.7	0.5	613.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021706	Zfyve16	ENSMUST00000154850	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021706	Zfyve16	ENSMUST00000136135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041138	Nme8	ENSMUST00000144820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041138	Nme8	ENSMUST00000223466	ENSMUSP00000152780	TRANSLATION	nonsense_mediated_decay	start	-	5	311	4	2.8	0	74.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041138	Nme8	ENSMUST00000039340	ENSMUSP00000047052	TRANSLATION	protein_coding	-	CCDS49208.1	1	470	4	4.534	0.5	155.7	0	-4,-5	-	-	5.394	MINOR
ENSMUSG00000041138	Nme8	ENSMUST00000091763	ENSMUSP00000089358	TRANSLATION	protein_coding	-	CCDS26262.2	1	586	12	7.284	0.5	185.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041138	Nme8	ENSMUST00000223286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041138	Nme8	ENSMUST00000221343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069255	Dusp22	ENSMUST00000221725	ENSMUSP00000152283	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	1.844	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069255	Dusp22	ENSMUST00000095914	ENSMUSP00000093603	TRANSLATION	protein_coding	-	CCDS26418.1	1	205	9	4.66	6.4	114.6	0	-4,-6	-	-	19.4	PRINCIPAL:4
ENSMUSG00000069255	Dusp22	ENSMUST00000091672	ENSMUSP00000089260	TRANSLATION	protein_coding	-	CCDS26417.1	1	184	9	4.96	5.1	114.6	0	-4,-6	-	-	19.518	ALTERNATIVE:1
ENSMUSG00000069255	Dusp22	ENSMUST00000110310	ENSMUSP00000105939	TRANSLATION	protein_coding	-	-	2	90	1	2.91	0	42.7	0	-4,-5	-	-	4.254	MINOR
ENSMUSG00000069255	Dusp22	ENSMUST00000220748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033799	Tasor2	ENSMUST00000221059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033799	Tasor2	ENSMUST00000222615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033799	Tasor2	ENSMUST00000223327	ENSMUSP00000152567	TRANSLATION	protein_coding	stop	-	5	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033799	Tasor2	ENSMUST00000096069	ENSMUSP00000093774	TRANSLATION	protein_coding	-	CCDS49201.1	1	2382	0	0	0.5	185.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033799	Tasor2	ENSMUST00000222325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033799	Tasor2	ENSMUST00000222909	ENSMUSP00000152081	TRANSLATION	protein_coding	start	-	1	1701	0	0	0	90.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033799	Tasor2	ENSMUST00000222041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033799	Tasor2	ENSMUST00000221629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035834	Polr3g	ENSMUST00000048993	ENSMUSP00000035289	TRANSLATION	protein_coding	-	CCDS36738.1	1	223	0	0	7.5	117.1	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000035834	Polr3g	ENSMUST00000161093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035834	Polr3g	ENSMUST00000160331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035834	Polr3g	ENSMUST00000162535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035834	Polr3g	ENSMUST00000161920	ENSMUSP00000125054	TRANSLATION	protein_coding	-	-	1	160	0	0	0	53.8	0	-4,-2	-	-	2.202	MINOR
ENSMUSG00000113061	Rps18-ps5	ENSMUST00000223428	ENSMUSP00000152211	TRANSLATION	protein_coding	-	-	-	152	0	1	14.2	189	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000071452	Serpinb9h	ENSMUST00000050276	ENSMUSP00000049819	TRANSLATION	protein_coding	-	-	5	377	0	6	0.5	416.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037946	Fgd3	ENSMUST00000048716	ENSMUSP00000048692	TRANSLATION	protein_coding	-	CCDS26499.1	1	733	5	9.85	1.5	244.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000037946	Fgd3	ENSMUST00000110087	ENSMUSP00000105714	TRANSLATION	protein_coding	-	CCDS26499.1	1	733	5	9.85	1.5	244.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000037946	Fgd3	ENSMUST00000110086	ENSMUSP00000105713	TRANSLATION	protein_coding	-	-	1	532	0	6.77	0	204.3	0	-4,-5	-	-	3.576	MINOR
ENSMUSG00000021559	Dapk1	ENSMUST00000224340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021559	Dapk1	ENSMUST00000225952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021559	Dapk1	ENSMUST00000044083	ENSMUSP00000040825	TRANSLATION	protein_coding	-	CCDS26581.1	1	1430	20	8.58	11.6	475.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021559	Dapk1	ENSMUST00000224789	ENSMUSP00000153205	TRANSLATION	nonsense_mediated_decay	start	-	-	15	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021559	Dapk1	ENSMUST00000225632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021559	Dapk1	ENSMUST00000077453	ENSMUSP00000076666	TRANSLATION	protein_coding	-	CCDS26581.1	1	1430	20	8.58	11.6	475.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021559	Dapk1	ENSMUST00000226059	ENSMUSP00000153607	TRANSLATION	protein_coding	-	-	-	1442	20	8.58	3.9	475.3	0	-4,-5	-	-	18.822	MINOR
ENSMUSG00000005312	Ubqln1	ENSMUST00000076454	ENSMUSP00000075782	TRANSLATION	protein_coding	-	CCDS26569.1	1	554	0	3.48	1.5	98.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000005312	Ubqln1	ENSMUST00000225818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005312	Ubqln1	ENSMUST00000225645	ENSMUSP00000153666	TRANSLATION	protein_coding	start	-	-	190	0	1	0	32.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005312	Ubqln1	ENSMUST00000058735	ENSMUSP00000050191	TRANSLATION	protein_coding	-	CCDS49281.1	1	582	0	3.48	1.5	98.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000100210	H3c7	ENSMUST00000075558	ENSMUSP00000074994	TRANSLATION	protein_coding	-	CCDS26344.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021650	Ptcd2	ENSMUST00000022153	ENSMUSP00000022153	TRANSLATION	protein_coding	-	CCDS26721.1	1	381	0	3.15	2.7	46.6	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000061829	Vmn1r214	ENSMUST00000227652	ENSMUSP00000153823	TRANSLATION	protein_coding	-	CCDS26329.1	-	367	0	0	0.5	106	3	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061829	Vmn1r214	ENSMUST00000074252	ENSMUSP00000073868	TRANSLATION	protein_coding	-	CCDS26329.1	-	367	0	0	0.5	106	3	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061829	Vmn1r214	ENSMUST00000227236	ENSMUSP00000153728	TRANSLATION	protein_coding	-	CCDS26329.1	-	367	0	0	0.5	106	3	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021477	Ctsl	ENSMUST00000222517	ENSMUSP00000152169	TRANSLATION	protein_coding	-	CCDS26600.1	5	334	7	8.68	2.9	338.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021477	Ctsl	ENSMUST00000021933	ENSMUSP00000021933	TRANSLATION	protein_coding	-	CCDS26600.1	1	334	7	8.68	2.9	338.3	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021477	Ctsl	ENSMUST00000222971	ENSMUSP00000152819	TRANSLATION	protein_coding	start	-	1	157	1	4	0	172.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021477	Ctsl	ENSMUST00000222462	ENSMUSP00000152497	TRANSLATION	protein_coding	stop	-	5	205	1	4.68	0	108.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000021477	Ctsl	ENSMUST00000223494	ENSMUSP00000152357	TRANSLATION	nonsense_mediated_decay	-	-	5	94	0	1.798	0	48.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000021477	Ctsl	ENSMUST00000220737	ENSMUSP00000152551	TRANSLATION	protein_coding	stop	-	5	163	5	4.18	0	120.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000021477	Ctsl	ENSMUST00000220617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042348	Arl15	ENSMUST00000224858	ENSMUSP00000153570	TRANSLATION	nonsense_mediated_decay	-	-	-	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042348	Arl15	ENSMUST00000091201	ENSMUSP00000088740	TRANSLATION	protein_coding	-	CCDS36785.1	1	204	14	3.15	7.6	121.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000042348	Arl15	ENSMUST00000224068	ENSMUSP00000153127	TRANSLATION	protein_coding	-	-	-	184	14	2.4	0.5	78.5	0	-4,-6	-	-	13.926	MINOR
ENSMUSG00000021709	Erbin	ENSMUST00000022222	ENSMUSP00000022222	TRANSLATION	protein_coding	-	-	5	1376	0	13.02	0	179.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021709	Erbin	ENSMUST00000091269	ENSMUSP00000088813	TRANSLATION	protein_coding	-	CCDS79233.1	1	1402	0	13.02	0.5	179.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021709	Erbin	ENSMUST00000189323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021709	Erbin	ENSMUST00000053927	ENSMUSP00000057956	TRANSLATION	protein_coding	-	-	5	1376	0	13.02	0	179.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021709	Erbin	ENSMUST00000191275	ENSMUSP00000140536	TRANSLATION	protein_coding	-	CCDS26744.1	1	1450	0	13.02	1.5	179.3	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000021709	Erbin	ENSMUST00000169083	ENSMUSP00000127607	TRANSLATION	protein_coding	-	CCDS79234.1	1	1411	0	13.02	0.5	179.3	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021709	Erbin	ENSMUST00000188997	ENSMUSP00000140931	TRANSLATION	protein_coding	-	CCDS79232.1	1	1294	0	12.62	0.5	179.3	0	-4,-2	-	-	11.202	ALTERNATIVE:2
ENSMUSG00000071180	Smim15	ENSMUST00000224361	ENSMUSP00000153283	TRANSLATION	protein_coding	-	CCDS36777.1	-	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000071180	Smim15	ENSMUST00000095458	ENSMUSP00000093110	TRANSLATION	protein_coding	-	CCDS36777.1	1	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000071180	Smim15	ENSMUST00000223808	ENSMUSP00000153155	TRANSLATION	protein_coding	-	CCDS36777.1	-	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000071180	Smim15	ENSMUST00000224390	ENSMUSP00000152900	TRANSLATION	protein_coding	-	CCDS36777.1	-	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000071180	Smim15	ENSMUST00000225972	ENSMUSP00000153282	TRANSLATION	protein_coding	-	CCDS36777.1	-	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000071180	Smim15	ENSMUST00000226042	ENSMUSP00000153340	TRANSLATION	protein_coding	-	CCDS36777.1	-	74	0	0	19.5	111.1	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000095916	Vmn1r191	ENSMUST00000235950	ENSMUSP00000158274	TRANSLATION	nonsense_mediated_decay	-	-	-	298	0	0	0.5	108.9	3	1,-4	-	-	-1	MINOR
ENSMUSG00000095916	Vmn1r191	ENSMUST00000072369	ENSMUSP00000072206	TRANSLATION	protein_coding	-	CCDS49218.1	-	298	0	0	0.5	108.9	3	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000095916	Vmn1r191	ENSMUST00000237107	ENSMUSP00000158004	TRANSLATION	protein_coding	-	CCDS49218.1	-	298	0	0	0.5	108.9	3	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069289	Vmn1r203	ENSMUST00000091729	ENSMUSP00000089322	TRANSLATION	protein_coding	-	CCDS26321.1	-	311	0	0	0.5	115.7	5	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069289	Vmn1r203	ENSMUST00000228889	ENSMUSP00000154399	TRANSLATION	protein_coding	-	CCDS26321.1	-	311	0	0	0.5	115.7	5	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000069289	Vmn1r203	ENSMUST00000227520	ENSMUSP00000153892	TRANSLATION	protein_coding	-	CCDS26321.1	-	311	0	0	0.5	115.7	5	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021636	Marveld2	ENSMUST00000163163	ENSMUSP00000129990	TRANSLATION	protein_coding	-	CCDS49345.1	1	278	0	2.18	0.5	105.5	0	-4,-7	-	-	8.148	MINOR
ENSMUSG00000021636	Marveld2	ENSMUST00000225754	ENSMUSP00000153294	TRANSLATION	protein_coding	-	CCDS26732.1	-	555	0	2.18	1.5	169.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021636	Marveld2	ENSMUST00000168772	ENSMUSP00000126438	TRANSLATION	protein_coding	-	CCDS26732.1	5	555	0	2.18	1.5	169.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021636	Marveld2	ENSMUST00000022137	ENSMUSP00000022137	TRANSLATION	protein_coding	-	CCDS26732.1	1	555	0	2.18	1.5	169.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000046899	Prl7a2	ENSMUST00000006660	ENSMUSP00000006660	TRANSLATION	protein_coding	-	CCDS26404.1	1	253	0	2.24	1.5	145.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000096330	Gm21976	ENSMUST00000178658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096330	Gm21976	ENSMUST00000186911	ENSMUSP00000139945	TRANSLATION	protein_coding	start	-	5	175	10	1.02	0	27.5	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000096330	Gm21976	ENSMUST00000180066	ENSMUSP00000136875	TRANSLATION	protein_coding	-	-	5	249	12	1.02	0.5	27.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000096330	Gm21976	ENSMUST00000180188	ENSMUSP00000136532	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069294	Vmn1r197	ENSMUST00000227017	ENSMUSP00000154632	TRANSLATION	protein_coding	-	CCDS26315.1	-	298	0	0	0.5	134.2	7	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069294	Vmn1r197	ENSMUST00000226225	ENSMUSP00000153747	TRANSLATION	protein_coding	-	CCDS26315.1	-	298	0	0	0.5	134.2	7	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000069294	Vmn1r197	ENSMUST00000091734	ENSMUSP00000089328	TRANSLATION	protein_coding	-	CCDS26315.1	-	298	0	0	0.5	134.2	7	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000063529	Stmnd1	ENSMUST00000076622	ENSMUSP00000075923	TRANSLATION	protein_coding	-	CCDS36650.1	1	279	0	0	1.5	27.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021552	Gkap1	ENSMUST00000224505	ENSMUSP00000153405	TRANSLATION	protein_coding	stop	-	-	81	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021552	Gkap1	ENSMUST00000225098	ENSMUSP00000153655	TRANSLATION	protein_coding	start	-	-	136	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021552	Gkap1	ENSMUST00000223811	ENSMUSP00000153234	TRANSLATION	protein_coding	stop	-	-	67	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021552	Gkap1	ENSMUST00000224273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021552	Gkap1	ENSMUST00000224114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021552	Gkap1	ENSMUST00000225034	ENSMUSP00000153571	TRANSLATION	protein_coding	stop	-	-	72	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021552	Gkap1	ENSMUST00000091579	ENSMUSP00000089169	TRANSLATION	protein_coding	-	CCDS36684.1	1	366	0	0	7.5	0	0	-2,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000021339	Mrs2	ENSMUST00000224170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021339	Mrs2	ENSMUST00000225296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021339	Mrs2	ENSMUST00000021772	ENSMUSP00000021772	TRANSLATION	protein_coding	-	CCDS26385.2	5	434	0	2.38	1.5	0	0	-2,2	-	-	6	PRINCIPAL:1
ENSMUSG00000021339	Mrs2	ENSMUST00000224894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095217	H2bc15	ENSMUST00000091709	ENSMUSP00000089301	TRANSLATION	protein_coding	-	CCDS26294.1	-	126	0	1	8.8	92.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000114923	Gm49345	ENSMUST00000225627	ENSMUSP00000153696	TRANSLATION	protein_coding,RT	stop	-	-	280	20	2	0	169.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000114923	Gm49345	ENSMUST00000224814	ENSMUSP00000153476	TRANSLATION	protein_coding,RT	stop	-	-	672	72	2.6	0	408.9	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000050002	Idnk	ENSMUST00000051490	ENSMUSP00000060218	TRANSLATION	protein_coding	-	CCDS36682.1	1	184	9	3.08	2.7	45.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050002	Idnk	ENSMUST00000109868	ENSMUSP00000105494	TRANSLATION	protein_coding	-	CCDS36683.1	1	84	8	1.58	1.5	37.3	0	-4,-7	-	-	13.212	MINOR
ENSMUSG00000050002	Idnk	ENSMUST00000226010	ENSMUSP00000153324	TRANSLATION	protein_coding	-	-	-	75	8	1.58	0	37.3	0	-4,-7	-	-	13.212	MINOR
ENSMUSG00000050002	Idnk	ENSMUST00000225236	ENSMUSP00000152973	TRANSLATION	nonsense_mediated_decay	-	-	-	48	6	0.5	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000042417	Ccno	ENSMUST00000224100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042417	Ccno	ENSMUST00000038404	ENSMUSP00000040083	TRANSLATION	protein_coding	-	CCDS36782.1	1	352	0	1.48	5.1	128.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000042417	Ccno	ENSMUST00000225555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033122	Hsd17b3	ENSMUST00000039832	ENSMUSP00000044217	TRANSLATION	protein_coding	-	CCDS26594.1	1	305	31	6.32	0.5	159.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000033122	Hsd17b3	ENSMUST00000166224	ENSMUSP00000132011	TRANSLATION	protein_coding	-	CCDS26594.1	2	305	31	6.32	0.5	159.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000033122	Hsd17b3	ENSMUST00000222783	ENSMUSP00000152848	TRANSLATION	protein_coding	-	CCDS26594.1	5	305	31	6.32	0.5	159.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000033122	Hsd17b3	ENSMUST00000221513	ENSMUSP00000152478	TRANSLATION	protein_coding	start	-	5	123	10	2.09	0	40	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033122	Hsd17b3	ENSMUST00000222810	ENSMUSP00000152274	TRANSLATION	protein_coding	stop	-	3	193	23	4.21	0	86.8	0	0,-3	-	-	-1	MINOR
ENSMUSG00000037989	Wnk2	ENSMUST00000110096	ENSMUSP00000105723	TRANSLATION	protein_coding	-	-	5	2092	4	5.8	0.5	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000159196	ENSMUSP00000124598	TRANSLATION	protein_coding	start	-	1	708	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037989	Wnk2	ENSMUST00000159559	ENSMUSP00000123915	TRANSLATION	protein_coding	-	-	5	2137	4	5.8	0	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000162403	ENSMUSP00000125539	TRANSLATION	protein_coding	-	-	5	1991	4	5.8	0	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000159633	ENSMUSP00000125522	TRANSLATION	nonsense_mediated_decay	start	-	3	138	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037989	Wnk2	ENSMUST00000035538	ENSMUSP00000047231	TRANSLATION	protein_coding	-	-	1	2065	4	5.8	0	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000160087	ENSMUSP00000124614	TRANSLATION	protein_coding	start	-	1	1332	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037989	Wnk2	ENSMUST00000091623	ENSMUSP00000089212	TRANSLATION	protein_coding	-	CCDS70454.1	5	2213	4	5.8	1.5	271.6	0	-4,-5	-	-	16	PRINCIPAL:4
ENSMUSG00000037989	Wnk2	ENSMUST00000162581	ENSMUSP00000125448	TRANSLATION	protein_coding	-	-	5	2065	4	5.8	0	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000110097	ENSMUSP00000105724	TRANSLATION	protein_coding	-	CCDS70455.1	5	2149	4	5.8	1.5	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000037989	Wnk2	ENSMUST00000049265	ENSMUSP00000049327	TRANSLATION	protein_coding	-	-	5	2101	4	5.8	0	271.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000069272	H2ac8	ENSMUST00000102969	ENSMUSP00000100034	TRANSLATION	protein_coding	-	CCDS26348.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000074651	Mcidas	ENSMUST00000092089	ENSMUSP00000089721	TRANSLATION	protein_coding	-	CCDS36783.1	1	379	0	1.8	0.5	60.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000108674	Olfr1359	ENSMUST00000077843	ENSMUSP00000077010	TRANSLATION	protein_coding	-	CCDS26286.1	-	313	0	0.42	6.3	186	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000108674	Olfr1359	ENSMUST00000214006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108674	Olfr1359	ENSMUST00000214435	ENSMUSP00000150106	TRANSLATION	protein_coding	-	CCDS26286.1	2	313	0	0.42	6.3	186	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000057726	Serpinb9g	ENSMUST00000081927	ENSMUSP00000080597	TRANSLATION	protein_coding	-	CCDS26438.1	1	377	0	6	0.5	419.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091109	Gm17622	ENSMUST00000165358	ENSMUSP00000128623	TRANSLATION	protein_coding	stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021403	Serpinb9b	ENSMUST00000006392	ENSMUSP00000006392	TRANSLATION	protein_coding	-	CCDS26432.1	1	377	0	6	1.5	417.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021403	Serpinb9b	ENSMUST00000220566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063894	Zkscan8	ENSMUST00000224362	ENSMUSP00000153171	TRANSLATION	protein_coding	-	-	-	516	36	1.6	1.5	348.8	0	-4,-6	-	-	15.858	MINOR
ENSMUSG00000063894	Zkscan8	ENSMUST00000156674	ENSMUSP00000116058	TRANSLATION	protein_coding	stop	-	5	253	0	0.8	0	127.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063894	Zkscan8	ENSMUST00000045228	ENSMUSP00000040248	TRANSLATION	protein_coding	-	CCDS26278.1	1	588	36	1.6	1.5	384.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000063894	Zkscan8	ENSMUST00000110481	ENSMUSP00000106107	TRANSLATION	protein_coding	-	CCDS56871.1	2	148	0	0.8	0.5	127.4	0	-4,-6	-	-	3	MINOR
ENSMUSG00000060093	H4c1	ENSMUST00000102964	ENSMUSP00000100029	TRANSLATION	protein_coding	-	CCDS26367.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095432	Zfp748	ENSMUST00000181892	ENSMUSP00000137928	TRANSLATION	protein_coding	-	CCDS59589.1	1	888	101	0.2	1.5	503.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095432	Zfp748	ENSMUST00000053289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016756	Cmah	ENSMUST00000224953	ENSMUSP00000153652	TRANSLATION	protein_coding	-	CCDS26376.1	-	577	4	0	3.9	26	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000016756	Cmah	ENSMUST00000224657	ENSMUSP00000153495	TRANSLATION	protein_coding	-	CCDS26376.1	-	577	4	0	3.9	26	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000016756	Cmah	ENSMUST00000225046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016756	Cmah	ENSMUST00000110391	ENSMUSP00000106021	TRANSLATION	protein_coding	-	CCDS26376.1	1	577	4	0	3.9	26	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000016756	Cmah	ENSMUST00000131691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016756	Cmah	ENSMUST00000050859	ENSMUSP00000061045	TRANSLATION	protein_coding	-	CCDS26376.1	5	577	4	0	3.9	26	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000016756	Cmah	ENSMUST00000224819	ENSMUSP00000153248	TRANSLATION	protein_coding	-	-	-	432	3	0	0	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000016756	Cmah	ENSMUST00000144621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016756	Cmah	ENSMUST00000167746	ENSMUSP00000129007	TRANSLATION	protein_coding	-	CCDS26376.1	1	577	4	0	3.9	26	0	-4,-6	-	-	11	PRINCIPAL:1
ENSMUSG00000016756	Cmah	ENSMUST00000142882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041297	Cdk13	ENSMUST00000221775	ENSMUSP00000152546	TRANSLATION	protein_coding	start/stop	-	5	221	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041297	Cdk13	ENSMUST00000042365	ENSMUSP00000036013	TRANSLATION	protein_coding	-	CCDS36604.1	1	1511	15	8.25	2.7	249	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000041297	Cdk13	ENSMUST00000222800	ENSMUSP00000152539	TRANSLATION	protein_coding	-	-	1	837	15	8.25	0	249	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000041297	Cdk13	ENSMUST00000222359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041297	Cdk13	ENSMUST00000220714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041297	Cdk13	ENSMUST00000222848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041297	Cdk13	ENSMUST00000223490	ENSMUSP00000152820	TRANSLATION	protein_coding	-	-	1	1451	15	8.25	2.7	249	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021572	Cep72	ENSMUST00000223028	ENSMUSP00000152137	TRANSLATION	nonsense_mediated_decay	start	-	2	141	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021572	Cep72	ENSMUST00000221122	ENSMUSP00000152484	TRANSLATION	protein_coding	start	-	1	295	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021572	Cep72	ENSMUST00000222609	ENSMUSP00000152641	TRANSLATION	protein_coding	start	-	1	470	0	2.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021572	Cep72	ENSMUST00000223031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021572	Cep72	ENSMUST00000220483	ENSMUSP00000152600	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021572	Cep72	ENSMUST00000036456	ENSMUSP00000037788	TRANSLATION	protein_coding	-	CCDS26639.1	1	646	0	2.2	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021572	Cep72	ENSMUST00000223417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042243	BC051665	ENSMUST00000026078	ENSMUSP00000026078	TRANSLATION	protein_coding	-	CCDS26582.1	1	330	4	6.6	2.7	319.5	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021506	Pitx1	ENSMUST00000021968	ENSMUSP00000021968	TRANSLATION	protein_coding	-	CCDS26556.1	1	315	0	1.33	6.3	107.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021506	Pitx1	ENSMUST00000173618	ENSMUSP00000134609	TRANSLATION	protein_coding	stop	-	3	123	0	1	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072066	6720489N17Rik	ENSMUST00000223338	ENSMUSP00000152670	TRANSLATION	protein_coding	stop	-	5	127	2	1.45	0	82.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072066	6720489N17Rik	ENSMUST00000091563	ENSMUSP00000089151	TRANSLATION	protein_coding	start	-	5	105	0	1	0.5	82.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072066	6720489N17Rik	ENSMUST00000201563	ENSMUSP00000144207	TRANSLATION	protein_coding	-	CCDS79202.1	1	106	0	1	0.5	82.6	0	-4,-5	-	-	10.14	PRINCIPAL:1
ENSMUSG00000044258	Ctla2a	ENSMUST00000223750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044258	Ctla2a	ENSMUST00000225966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044258	Ctla2a	ENSMUST00000226023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044258	Ctla2a	ENSMUST00000225762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044258	Ctla2a	ENSMUST00000224054	ENSMUSP00000152927	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044258	Ctla2a	ENSMUST00000021880	ENSMUSP00000021880	TRANSLATION	protein_coding	-	CCDS49290.1	1	137	0	2.08	0.5	55.3	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044258	Ctla2a	ENSMUST00000225385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044258	Ctla2a	ENSMUST00000225856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044258	Ctla2a	ENSMUST00000225498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071291	Zfp58	ENSMUST00000076123	ENSMUSP00000075487	TRANSLATION	protein_coding	-	CCDS26616.1	1	489	56	2.6	0.5	378.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000071291	Zfp58	ENSMUST00000091523	ENSMUSP00000089108	TRANSLATION	protein_coding	stop	-	3	241	20	2.4	0	198.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071291	Zfp58	ENSMUST00000171518	ENSMUSP00000132285	TRANSLATION	protein_coding	-	CCDS26616.1	1	489	56	2.6	0.5	378.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000071291	Zfp58	ENSMUST00000163534	ENSMUSP00000129177	TRANSLATION	protein_coding	stop	-	3	169	8	1.4	0	122.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015672	Mrpl32	ENSMUST00000221699	ENSMUSP00000152859	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	1.33	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000015672	Mrpl32	ENSMUST00000015816	ENSMUSP00000015816	TRANSLATION	nonsense_mediated_decay	start	-	3	39	0	0	0	0	0	0,1	-	-	-1	MINOR
ENSMUSG00000015672	Mrpl32	ENSMUST00000223530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015672	Mrpl32	ENSMUST00000220621	ENSMUSP00000152345	TRANSLATION	protein_coding	-	CCDS26249.1	1	187	3	3.33	5.1	0	0	0,1	-	-	11	PRINCIPAL:1
ENSMUSG00000069299	Vmn1r188	ENSMUST00000226680	ENSMUSP00000153995	TRANSLATION	protein_coding	-	CCDS26309.1	-	308	0	0	0.5	127.4	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069299	Vmn1r188	ENSMUST00000228243	ENSMUSP00000154654	TRANSLATION	protein_coding	-	CCDS26309.1	-	308	0	0	0.5	127.4	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069299	Vmn1r188	ENSMUST00000091739	ENSMUSP00000089333	TRANSLATION	protein_coding	-	CCDS26309.1	-	308	0	0	0.5	127.4	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058672	Tubb2a	ENSMUST00000056427	ENSMUSP00000060246	TRANSLATION	protein_coding	-	CCDS26444.1	1	445	19	3.5	15	377.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000095105	Edaradd	ENSMUST00000179308	ENSMUSP00000136158	TRANSLATION	protein_coding	-	CCDS36593.1	1	208	0	0	1.5	39.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047419	Cmya5	ENSMUST00000062122	ENSMUSP00000050408	TRANSLATION	protein_coding	-	CCDS49329.1	1	3676	4	1.44	0.5	50.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000069297	Vmn1r194	ENSMUST00000091737	ENSMUSP00000089331	TRANSLATION	protein_coding	-	CCDS36614.1	-	296	0	0	0.5	123	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069300	H2bc11	ENSMUST00000110452	ENSMUSP00000106082	TRANSLATION	protein_coding	-	CCDS26308.1	-	126	0	1	8.8	92.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000115020	Vmn1r218	ENSMUST00000227741	ENSMUSP00000154303	TRANSLATION	protein_coding	-	-	-	218	0	0	0	114.4	5	4,-3	-	-	4.734	MINOR
ENSMUSG00000115020	Vmn1r218	ENSMUST00000228348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115020	Vmn1r218	ENSMUST00000227160	ENSMUSP00000154769	TRANSLATION	protein_coding	-	-	-	218	0	0	0	114.4	5	4,-3	-	-	4.734	MINOR
ENSMUSG00000115020	Vmn1r218	ENSMUST00000226692	ENSMUSP00000154191	TRANSLATION	protein_coding	-	CCDS26333.1	-	298	0	0	0.5	135.5	6	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000115020	Vmn1r218	ENSMUST00000227050	ENSMUSP00000154543	TRANSLATION	protein_coding	-	CCDS26333.1	-	298	0	0	0.5	135.5	6	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000115020	Vmn1r218	ENSMUST00000074992	ENSMUSP00000074519	TRANSLATION	protein_coding	-	CCDS26333.1	-	298	0	0	0.5	135.5	6	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034891	Sncb	ENSMUST00000153829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034891	Sncb	ENSMUST00000138067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034891	Sncb	ENSMUST00000134110	ENSMUSP00000116296	TRANSLATION	protein_coding	-	CCDS36670.1	3	133	0	2.46	2.7	155.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034891	Sncb	ENSMUST00000036825	ENSMUSP00000043074	TRANSLATION	protein_coding	-	CCDS36670.1	1	133	0	2.46	2.7	155.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037816	Fbxw17	ENSMUST00000176424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037816	Fbxw17	ENSMUST00000176772	ENSMUSP00000135878	TRANSLATION	protein_coding	start	-	3	91	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037816	Fbxw17	ENSMUST00000176976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037816	Fbxw17	ENSMUST00000177245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037816	Fbxw17	ENSMUST00000176298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037816	Fbxw17	ENSMUST00000177233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037816	Fbxw17	ENSMUST00000176508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037816	Fbxw17	ENSMUST00000176543	ENSMUSP00000134899	TRANSLATION	protein_coding	start	-	3	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037816	Fbxw17	ENSMUST00000176479	ENSMUSP00000135527	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0	0	37.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037816	Fbxw17	ENSMUST00000176913	ENSMUSP00000135671	TRANSLATION	nonsense_mediated_decay	-	-	2	43	0	0	0	37.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037816	Fbxw17	ENSMUST00000046974	ENSMUSP00000041750	TRANSLATION	protein_coding	-	CCDS36661.1	1	466	0	0	1.5	38.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037816	Fbxw17	ENSMUST00000176470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037816	Fbxw17	ENSMUST00000177541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078302	Foxd1	ENSMUST00000105098	ENSMUSP00000100725	TRANSLATION	protein_coding	-	CCDS36759.1	-	456	0	0.4	0.5	130.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021711	Trappc13	ENSMUST00000141557	ENSMUSP00000118316	TRANSLATION	protein_coding	-	CCDS49352.1	1	417	0	0	10.8	285.1	0	-4,-5	-	-	9.324	ALTERNATIVE:1
ENSMUSG00000021711	Trappc13	ENSMUST00000142745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021711	Trappc13	ENSMUST00000022224	ENSMUSP00000022224	TRANSLATION	protein_coding	-	CCDS49353.1	1	418	0	0	10.8	285.1	0	-4,-5	-	-	9.324	PRINCIPAL:4
ENSMUSG00000021711	Trappc13	ENSMUST00000144060	ENSMUSP00000114406	TRANSLATION	protein_coding	-	CCDS49351.1	1	412	0	0	12.8	280.1	0	-4,-5	-	-	9.7	ALTERNATIVE:1
ENSMUSG00000021711	Trappc13	ENSMUST00000179891	ENSMUSP00000136986	TRANSLATION	protein_coding	-	-	5	418	0	0	10.8	282.1	0	-4,-5	-	-	9.144	ALTERNATIVE:1
ENSMUSG00000021661	Ankra2	ENSMUST00000123924	ENSMUSP00000122701	TRANSLATION	protein_coding	-	CCDS70493.1	1	304	0	4.626	0.5	81.8	0	-4,-5	-	-	11.13	MINOR
ENSMUSG00000021661	Ankra2	ENSMUST00000155629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021661	Ankra2	ENSMUST00000150916	ENSMUSP00000116590	TRANSLATION	protein_coding	-	-	1	154	0	4.13	0.5	81.5	0	-4,-5	-	-	10.116	MINOR
ENSMUSG00000021661	Ankra2	ENSMUST00000223606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021661	Ankra2	ENSMUST00000091356	ENSMUSP00000088915	TRANSLATION	protein_coding	-	CCDS70494.1	1	144	0	3.896	0.5	81.5	0	-4,-5	-	-	9.648	MINOR
ENSMUSG00000021661	Ankra2	ENSMUST00000226100	ENSMUSP00000153417	TRANSLATION	protein_coding	-	-	-	152	0	4.33	4	81.5	0	-4,-5	-	-	11.386	MINOR
ENSMUSG00000021661	Ankra2	ENSMUST00000022164	ENSMUSP00000022164	TRANSLATION	protein_coding	-	CCDS26713.1	1	312	0	5.06	14.8	81.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021661	Ankra2	ENSMUST00000150352	ENSMUSP00000117508	TRANSLATION	protein_coding	-	CCDS70492.1	1	309	0	4.86	0.5	81.7	0	-4,-5	-	-	11.592	MINOR
ENSMUSG00000067586	S1pr3	ENSMUST00000087978	ENSMUSP00000085293	TRANSLATION	protein_coding	-	CCDS26512.1	1	378	0	0.8	0.5	126.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021210	Akr1c6	ENSMUST00000220941	ENSMUSP00000152575	TRANSLATION	nonsense_mediated_decay	-	-	5	103	7	2.82	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021210	Akr1c6	ENSMUST00000021630	ENSMUSP00000021630	TRANSLATION	protein_coding	-	CCDS26223.1	1	323	28	8.83	5.1	190.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021210	Akr1c6	ENSMUST00000128695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021210	Akr1c6	ENSMUST00000223118	ENSMUSP00000152778	TRANSLATION	protein_coding	start	-	5	135	19	3.25	0	67.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021210	Akr1c6	ENSMUST00000156277	ENSMUSP00000117624	TRANSLATION	protein_coding	stop	-	5	174	13	5.08	0	119	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063130	Calml3	ENSMUST00000222976	ENSMUSP00000152735	TRANSLATION	protein_coding	start	-	5	115	15	1	0	80	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063130	Calml3	ENSMUST00000077698	ENSMUSP00000076880	TRANSLATION	protein_coding	-	CCDS26214.1	-	149	21	2.5	21.5	147.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021620	Acot12	ENSMUST00000159214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021620	Acot12	ENSMUST00000022120	ENSMUSP00000022120	TRANSLATION	protein_coding	-	CCDS26678.1	1	556	22	12.6	1.5	161.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021620	Acot12	ENSMUST00000161337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048904	Neurog1	ENSMUST00000058475	ENSMUSP00000050484	TRANSLATION	protein_coding	-	CCDS26559.1	-	244	0	0.4	3.9	57.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021335	Slc17a1	ENSMUST00000110413	ENSMUSP00000106043	TRANSLATION	protein_coding	-	CCDS26372.1	1	465	0	0	1.5	160	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021335	Slc17a1	ENSMUST00000129042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021335	Slc17a1	ENSMUST00000130211	ENSMUSP00000120824	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000021335	Slc17a1	ENSMUST00000006785	ENSMUSP00000006785	TRANSLATION	protein_coding	-	CCDS26372.1	1	465	0	0	1.5	160	11	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058258	Idi1	ENSMUST00000176851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058258	Idi1	ENSMUST00000177447	ENSMUSP00000135861	TRANSLATION	protein_coding	start	-	5	146	14	3.2	0	43.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058258	Idi1	ENSMUST00000177400	ENSMUSP00000135770	TRANSLATION	protein_coding	start	-	5	163	15	3.75	0	47.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058258	Idi1	ENSMUST00000169314	ENSMUSP00000132780	TRANSLATION	protein_coding	-	CCDS26233.2	1	283	19	4.75	1.5	83.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000058258	Idi1	ENSMUST00000177397	ENSMUSP00000135349	TRANSLATION	protein_coding	start	-	3	163	14	3.2	0	43.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069310	H3c3	ENSMUST00000091752	ENSMUSP00000089346	TRANSLATION	protein_coding	-	CCDS26362.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000095071	AF067061	ENSMUST00000179905	ENSMUSP00000136309	TRANSLATION	protein_coding	-	CCDS84071.1	-	171	0	0	0.5	307.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095071	AF067061	ENSMUST00000181748	ENSMUSP00000137949	TRANSLATION	protein_coding	-	CCDS84071.1	1	171	0	0	0.5	307.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054889	Dsp	ENSMUST00000127906	ENSMUSP00000117252	TRANSLATION	protein_coding	-	-	5	2284	0	16.76	0.5	356.8	0	-4,-7	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000054889	Dsp	ENSMUST00000124830	ENSMUSP00000115062	TRANSLATION	protein_coding	-	CCDS49239.1	5	2883	0	17.06	0.5	356.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000054889	Dsp	ENSMUST00000145151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015536	Mocs2	ENSMUST00000184245	ENSMUSP00000139355	TRANSLATION	protein_coding	-	CCDS49369.1	5	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000184781	ENSMUSP00000138856	TRANSLATION	protein_coding	-	CCDS49369.1	5	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000183407	ENSMUSP00000139011	TRANSLATION	protein_coding	-	CCDS49369.1	5	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000164871	ENSMUSP00000131816	TRANSLATION	protein_coding	stop	-	5	82	0	1.33	0	25.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000170985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015536	Mocs2	ENSMUST00000015680	ENSMUSP00000015680	TRANSLATION	protein_coding	-	CCDS49371.1	1	189	0	4.43	6.3	134.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015536	Mocs2	ENSMUST00000050131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015536	Mocs2	ENSMUST00000164737	ENSMUSP00000133069	TRANSLATION	protein_coding	-	CCDS49370.1	3	157	0	3.43	0.5	42.5	0	-4,-5	-	-	4.47	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000166176	ENSMUSP00000125797	TRANSLATION	protein_coding	-	CCDS49371.1	1	189	0	4.43	6.3	134.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015536	Mocs2	ENSMUST00000184214	ENSMUSP00000139285	TRANSLATION	protein_coding	-	CCDS49369.1	3	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000184335	ENSMUSP00000139064	TRANSLATION	protein_coding	-	CCDS49369.1	5	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000184282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015536	Mocs2	ENSMUST00000184046	ENSMUSP00000138936	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000166104	ENSMUSP00000129021	TRANSLATION	protein_coding	-	CCDS49369.1	1	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000165022	ENSMUSP00000128965	TRANSLATION	protein_coding	-	CCDS49369.1	1	88	0	2.25	3.9	62.2	0	-4,-6	-	-	4.382	MINOR
ENSMUSG00000015536	Mocs2	ENSMUST00000184672	ENSMUSP00000139298	TRANSLATION	protein_coding	-	CCDS49371.1	5	189	0	4.43	6.3	134.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015536	Mocs2	ENSMUST00000165669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000143173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000132136	ENSMUSP00000121083	TRANSLATION	protein_coding	stop	-	2	69	0	0	0	73.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000143144	ENSMUSP00000120615	TRANSLATION	protein_coding	stop	-	5	133	0	0	0	162	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000153065	ENSMUSP00000119874	TRANSLATION	protein_coding	-	CCDS56882.1	5	284	0	0	5.3	425.9	0	-4,-5	-	-	7.572	MINOR
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000026989	ENSMUSP00000026989	TRANSLATION	protein_coding	-	CCDS26529.1	1	303	0	0	7.5	432.8	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000150938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000147318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000153708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025871	4833439L19Rik	ENSMUST00000126295	ENSMUSP00000121916	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	62.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076752	Trgc2	ENSMUST00000103561	ENSMUSP00000100340	TRANSLATION	TR_C_gene	start	-	-	167	0	1	0	38.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000045034	Ankrd34b	ENSMUST00000061594	ENSMUSP00000054330	TRANSLATION	protein_coding	-	CCDS26681.1	1	508	0	0.78	1.5	71.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045034	Ankrd34b	ENSMUST00000165225	ENSMUSP00000128171	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045034	Ankrd34b	ENSMUST00000168871	ENSMUSP00000126289	TRANSLATION	protein_coding	-	CCDS26681.1	1	508	0	0.78	1.5	71.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021538	Il9	ENSMUST00000022019	ENSMUSP00000022019	TRANSLATION	protein_coding	-	CCDS26562.1	1	144	0	0	1.5	147	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000042842	Serpinb6b	ENSMUST00000110293	ENSMUSP00000105922	TRANSLATION	protein_coding	-	CCDS26430.1	1	377	0	6.35	2.7	425.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000042842	Serpinb6b	ENSMUST00000222967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042842	Serpinb6b	ENSMUST00000164541	ENSMUSP00000152419	TRANSLATION	protein_coding	-	-	1	258	0	4.05	0	307.1	0	-4,-5	-	-	1.398	MINOR
ENSMUSG00000042842	Serpinb6b	ENSMUST00000017184	ENSMUSP00000017184	TRANSLATION	nonsense_mediated_decay	-	-	1	210	0	4.35	0	212.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021414	Fam217a	ENSMUST00000223834	ENSMUSP00000153297	TRANSLATION	protein_coding	-	-	-	662	0	0	0.5	173.6	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000021414	Fam217a	ENSMUST00000224613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021414	Fam217a	ENSMUST00000225242	ENSMUSP00000153128	TRANSLATION	protein_coding	-	-	-	419	0	0	0	173.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000021414	Fam217a	ENSMUST00000021851	ENSMUSP00000021851	TRANSLATION	protein_coding	-	CCDS56875.1	1	510	0	0	1.5	173.6	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000061615	H2ac4	ENSMUST00000078369	ENSMUSP00000077477	TRANSLATION	protein_coding	-	CCDS26364.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000004341	Gpx6	ENSMUST00000004453	ENSMUSP00000004453	TRANSLATION	protein_coding	-	CCDS26271.1	1	221	0	4.15	3.9	141.3	0	4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000004341	Gpx6	ENSMUST00000136668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096641	Gm904	ENSMUST00000192039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096641	Gm904	ENSMUST00000191999	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000096641	Gm904	ENSMUST00000099519	ENSMUSP00000097119	TRANSLATION	protein_coding	-	CCDS49263.1	1	102	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000021492	F12	ENSMUST00000021948	ENSMUSP00000021948	TRANSLATION	protein_coding	-	CCDS36675.1	1	597	6	5.64	0.5	447.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021492	F12	ENSMUST00000170921	ENSMUSP00000125771	TRANSLATION	protein_coding	-	-	3	143	4	2	0	94.4	0	4,-1	-	-	4.002	MINOR
ENSMUSG00000048924	Ccdc125	ENSMUST00000170347	ENSMUSP00000130107	TRANSLATION	protein_coding	-	CCDS49346.1	1	330	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000048924	Ccdc125	ENSMUST00000057325	ENSMUSP00000058484	TRANSLATION	protein_coding	-	CCDS26736.1	1	500	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000021476	Habp4	ENSMUST00000222806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021476	Habp4	ENSMUST00000223328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021476	Habp4	ENSMUST00000223377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021476	Habp4	ENSMUST00000021929	ENSMUSP00000021929	TRANSLATION	protein_coding	-	CCDS36702.1	1	412	0	0	1.5	249.7	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000021476	Habp4	ENSMUST00000221904	ENSMUSP00000152612	TRANSLATION	nonsense_mediated_decay	-	-	1	342	0	0	0	249.7	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000021476	Habp4	ENSMUST00000221264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021607	Mrpl36	ENSMUST00000022098	ENSMUSP00000022098	TRANSLATION	protein_coding	-	CCDS26631.1	1	102	0	0.7	0.5	60.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021607	Mrpl36	ENSMUST00000222030	ENSMUSP00000152607	TRANSLATION	protein_coding	-	CCDS26631.1	3	102	0	0.7	0.5	60.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021607	Mrpl36	ENSMUST00000221730	ENSMUSP00000152226	TRANSLATION	protein_coding	-	CCDS26631.1	3	102	0	0.7	0.5	60.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021622	Ckmt2	ENSMUST00000022122	ENSMUSP00000022122	TRANSLATION	protein_coding	-	CCDS26679.1	1	419	22	8.55	12.8	376.5	0	-1,0	-	-	22	PRINCIPAL:1
ENSMUSG00000095930	Nim1k	ENSMUST00000178973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095930	Nim1k	ENSMUST00000178142	ENSMUSP00000136377	TRANSLATION	protein_coding	-	CCDS56902.1	1	436	19	2	7.5	237.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000021441	Cts6	ENSMUST00000021890	ENSMUSP00000021890	TRANSLATION	protein_coding	-	CCDS26586.1	1	334	4	6.6	1.5	303	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000051111	Sv2c	ENSMUST00000182180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051111	Sv2c	ENSMUST00000220740	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051111	Sv2c	ENSMUST00000161263	ENSMUSP00000124473	TRANSLATION	protein_coding	-	CCDS49333.1	5	727	0	5.82	5.2	140	13	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000051111	Sv2c	ENSMUST00000182289	ENSMUSP00000138317	TRANSLATION	protein_coding	-	-	1	667	0	5.82	0	101.4	11	-4,-5	-	-	9.684	MINOR
ENSMUSG00000041112	Elmo1	ENSMUST00000180767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041112	Elmo1	ENSMUST00000181429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041112	Elmo1	ENSMUST00000220751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041112	Elmo1	ENSMUST00000072519	ENSMUSP00000072334	TRANSLATION	protein_coding	-	CCDS26265.1	1	727	0	4.5	18.2	485.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041112	Elmo1	ENSMUST00000221595	ENSMUSP00000152200	TRANSLATION	protein_coding	start/stop	-	5	193	0	0	0	111.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041112	Elmo1	ENSMUST00000180626	ENSMUSP00000152595	TRANSLATION	protein_coding	-	-	1	420	0	0	0	266.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041112	Elmo1	ENSMUST00000221067	ENSMUSP00000152261	TRANSLATION	protein_coding	stop	-	3	25	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021676	Iqgap2	ENSMUST00000238392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021676	Iqgap2	ENSMUST00000068603	ENSMUSP00000067685	TRANSLATION	protein_coding	-	CCDS36753.1	1	1575	0	16.2	3.9	420.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021676	Iqgap2	ENSMUST00000238404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021676	Iqgap2	ENSMUST00000238515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021676	Iqgap2	ENSMUST00000238261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021676	Iqgap2	ENSMUST00000238595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021676	Iqgap2	ENSMUST00000238783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021676	Iqgap2	ENSMUST00000238496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021676	Iqgap2	ENSMUST00000238263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021725	Parp8	ENSMUST00000224157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021725	Parp8	ENSMUST00000223949	ENSMUSP00000152911	TRANSLATION	protein_coding	-	-	-	852	0	2.045	3.4	50	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000021725	Parp8	ENSMUST00000225974	ENSMUSP00000153169	TRANSLATION	nonsense_mediated_decay	-	-	-	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021725	Parp8	ENSMUST00000225344	ENSMUSP00000153307	TRANSLATION	nonsense_mediated_decay	-	-	-	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021725	Parp8	ENSMUST00000022239	ENSMUSP00000022239	TRANSLATION	protein_coding	-	CCDS36790.1	5	891	0	2.045	0.5	50	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021725	Parp8	ENSMUST00000223833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021725	Parp8	ENSMUST00000226107	ENSMUSP00000153188	TRANSLATION	nonsense_mediated_decay	-	-	-	253	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056728	Ctsll3	ENSMUST00000223578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056728	Ctsll3	ENSMUST00000043754	ENSMUSP00000036801	TRANSLATION	protein_coding	-	CCDS36691.1	1	331	4	6.6	0.5	325.1	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000021318	Gli3	ENSMUST00000130535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021318	Gli3	ENSMUST00000130065	ENSMUSP00000115989	TRANSLATION	protein_coding	stop	-	1	596	16	2.6	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021318	Gli3	ENSMUST00000141194	ENSMUSP00000152092	TRANSLATION	protein_coding	-	-	2	77	0	0	0	0	0	1,-4	-	-	0	MINOR
ENSMUSG00000021318	Gli3	ENSMUST00000110510	ENSMUSP00000106137	TRANSLATION	protein_coding	-	CCDS36603.1	1	1583	20	3.53	1.5	94.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038212	Mfsd14b	ENSMUST00000148779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038212	Mfsd14b	ENSMUST00000054730	ENSMUSP00000062566	TRANSLATION	protein_coding	-	CCDS26603.2	5	507	0	0	2.7	109.8	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038212	Mfsd14b	ENSMUST00000155487	ENSMUSP00000118180	TRANSLATION	protein_coding	-	CCDS26603.2	1	507	0	0	2.7	109.8	11	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038212	Mfsd14b	ENSMUST00000220824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033834	Tpbpa	ENSMUST00000225275	ENSMUSP00000153002	TRANSLATION	protein_coding	-	-	-	125	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000033834	Tpbpa	ENSMUST00000225936	ENSMUSP00000152958	TRANSLATION	nonsense_mediated_decay	-	-	-	60	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000033834	Tpbpa	ENSMUST00000021885	ENSMUSP00000021885	TRANSLATION	protein_coding	-	CCDS36693.1	1	124	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000021577	Sdha	ENSMUST00000221594	ENSMUSP00000152298	TRANSLATION	protein_coding	start	-	3	233	22	5	0	147.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021577	Sdha	ENSMUST00000022062	ENSMUSP00000022062	TRANSLATION	protein_coding	-	CCDS26643.1	1	664	47	14	4.1	560.6	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000021577	Sdha	ENSMUST00000160900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021577	Sdha	ENSMUST00000161434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021577	Sdha	ENSMUST00000160400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021577	Sdha	ENSMUST00000161456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021577	Sdha	ENSMUST00000162137	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021577	Sdha	ENSMUST00000161086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021577	Sdha	ENSMUST00000160667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021645	Smn1	ENSMUST00000091321	ENSMUSP00000088871	TRANSLATION	protein_coding	-	-	1	39	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021645	Smn1	ENSMUST00000143937	ENSMUSP00000119381	TRANSLATION	protein_coding	start/stop	-	5	161	5	1.5	0	147.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021645	Smn1	ENSMUST00000140745	ENSMUSP00000118509	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021645	Smn1	ENSMUST00000147306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021645	Smn1	ENSMUST00000135355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021645	Smn1	ENSMUST00000151389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021645	Smn1	ENSMUST00000134514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021645	Smn1	ENSMUST00000125572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021645	Smn1	ENSMUST00000022147	ENSMUSP00000022147	TRANSLATION	protein_coding	-	CCDS26725.1	1	288	5	4.35	0.5	357.2	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000021687	Scamp1	ENSMUST00000022197	ENSMUSP00000022197	TRANSLATION	protein_coding	-	CCDS36750.1	1	338	0	0	14.8	249.4	7	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000021687	Scamp1	ENSMUST00000152555	ENSMUSP00000123135	TRANSLATION	protein_coding	-	CCDS84049.1	1	286	0	0	1.7	249.4	7	-4,-5	-	-	6.204	MINOR
ENSMUSG00000021687	Scamp1	ENSMUST00000138255	ENSMUSP00000121039	TRANSLATION	protein_coding	stop	-	5	116	0	0	0	75.1	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000021687	Scamp1	ENSMUST00000153558	ENSMUSP00000120053	TRANSLATION	protein_coding	-	CCDS84049.1	1	286	0	0	1.7	249.4	7	-4,-5	-	-	6.204	MINOR
ENSMUSG00000116057	Vmn1r216	ENSMUST00000080253	ENSMUSP00000079139	TRANSLATION	protein_coding	-	CCDS26331.1	-	298	0	0	0.5	116.2	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076757	Trgc4	ENSMUST00000179181	ENSMUSP00000138488	TRANSLATION	TR_C_gene	start	-	-	190	0	1.2	0	38.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021466	Ptch1	ENSMUST00000195756	ENSMUSP00000141990	TRANSLATION	protein_coding	stop	-	1	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021466	Ptch1	ENSMUST00000223515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021466	Ptch1	ENSMUST00000195258	ENSMUSP00000141309	TRANSLATION	nonsense_mediated_decay	start	-	5	456	0	2.72	0	104.1	13	-4,-1	-	-	-1	MINOR
ENSMUSG00000021466	Ptch1	ENSMUST00000192155	ENSMUSP00000141489	TRANSLATION	protein_coding	-	-	5	1297	0	6.74	1.7	255.5	21	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021466	Ptch1	ENSMUST00000194663	ENSMUSP00000141766	TRANSLATION	nonsense_mediated_decay	-	-	2	581	0	3.52	0	148.7	15	-4,-1	-	-	-1	MINOR
ENSMUSG00000021466	Ptch1	ENSMUST00000222040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021466	Ptch1	ENSMUST00000195106	ENSMUSP00000141298	TRANSLATION	protein_coding	stop	-	5	326	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000021466	Ptch1	ENSMUST00000021921	ENSMUSP00000021921	TRANSLATION	protein_coding	-	CCDS26592.1	1	1434	0	6.74	1.5	255.5	22	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000021466	Ptch1	ENSMUST00000193953	ENSMUSP00000142036	TRANSLATION	protein_coding	stop	-	1	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021466	Ptch1	ENSMUST00000220588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021481	Zfp346	ENSMUST00000162428	ENSMUSP00000125389	TRANSLATION	nonsense_mediated_decay	-	-	5	132	4	2	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000159278	ENSMUSP00000125078	TRANSLATION	protein_coding	-	-	5	309	16	4.33	0	105.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021481	Zfp346	ENSMUST00000162288	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021481	Zfp346	ENSMUST00000021937	ENSMUSP00000021937	TRANSLATION	protein_coding	-	CCDS26539.1	1	294	16	4.33	1.5	105.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021481	Zfp346	ENSMUST00000161315	ENSMUSP00000124397	TRANSLATION	protein_coding	stop	-	2	151	4	2	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000162653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021481	Zfp346	ENSMUST00000161077	ENSMUSP00000125204	TRANSLATION	protein_coding	start	-	3	238	12	4.33	0	87.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000159147	ENSMUSP00000124107	TRANSLATION	protein_coding	-	-	5	262	15	2.43	1.2	95.9	0	-4,-5	-	-	12.96	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000161551	ENSMUSP00000124180	TRANSLATION	nonsense_mediated_decay	-	-	5	101	3	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000160660	ENSMUSP00000124034	TRANSLATION	nonsense_mediated_decay	-	-	3	135	4	2	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021481	Zfp346	ENSMUST00000160310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021481	Zfp346	ENSMUST00000161018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021481	Zfp346	ENSMUST00000162476	ENSMUSP00000125743	TRANSLATION	nonsense_mediated_decay	-	-	3	132	4	2	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021392	Nol8	ENSMUST00000221083	ENSMUSP00000152186	TRANSLATION	protein_coding	stop	-	3	225	0	1.89	0	33.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021392	Nol8	ENSMUST00000222197	ENSMUSP00000152536	TRANSLATION	protein_coding	-	CCDS36658.1	1	1165	0	1.89	0.5	33.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000021392	Nol8	ENSMUST00000223346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021392	Nol8	ENSMUST00000223264	ENSMUSP00000152517	TRANSLATION	protein_coding	stop	-	2	93	0	1.73	0	33.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021392	Nol8	ENSMUST00000221142	ENSMUSP00000152552	TRANSLATION	protein_coding	-	-	1	1147	0	1.89	0.5	33.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021392	Nol8	ENSMUST00000222333	ENSMUSP00000152324	TRANSLATION	protein_coding	stop	-	3	145	0	1.89	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021392	Nol8	ENSMUST00000221328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021392	Nol8	ENSMUST00000223467	ENSMUSP00000152878	TRANSLATION	protein_coding	-	-	1	1147	0	1.89	0.5	33.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021392	Nol8	ENSMUST00000021824	ENSMUSP00000021824	TRANSLATION	protein_coding	-	CCDS36658.1	5	1165	0	1.89	0.5	33.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000058883	Zfp708	ENSMUST00000190566	ENSMUSP00000139928	TRANSLATION	protein_coding	-	CCDS79206.1	1	496	64	1.1	1.5	342.3	0	-4,-7	-	-	11.178	MINOR
ENSMUSG00000058883	Zfp708	ENSMUST00000109742	ENSMUSP00000105364	TRANSLATION	protein_coding	-	CCDS49298.1	1	529	64	1.9	1.5	413.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000058883	Zfp708	ENSMUST00000109743	ENSMUSP00000105365	TRANSLATION	protein_coding	-	-	2	541	64	1.9	0.5	413.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000069189	Zdhhc11	ENSMUST00000222487	ENSMUSP00000152197	TRANSLATION	nonsense_mediated_decay	-	-	1	323	7	0	0	104	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000069189	Zdhhc11	ENSMUST00000222951	ENSMUSP00000152788	TRANSLATION	nonsense_mediated_decay	-	-	1	151	1	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000069189	Zdhhc11	ENSMUST00000091493	ENSMUSP00000089075	TRANSLATION	protein_coding	-	CCDS36729.1	1	347	7	0	0.5	104	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055360	Prl2c5	ENSMUST00000143335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055360	Prl2c5	ENSMUST00000151144	ENSMUSP00000117522	TRANSLATION	protein_coding	-	-	2	179	0	2.2	0	173.2	0	3,-2	-	-	6.738	MINOR
ENSMUSG00000055360	Prl2c5	ENSMUST00000126540	ENSMUSP00000115024	TRANSLATION	protein_coding	-	CCDS79164.1	1	225	0	2.8	0.5	239.5	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000055360	Prl2c5	ENSMUST00000021778	ENSMUSP00000021778	TRANSLATION	protein_coding	-	CCDS26242.1	1	222	0	2.8	0.5	239.5	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000033765	Calm4	ENSMUST00000042219	ENSMUSP00000041636	TRANSLATION	protein_coding	-	CCDS26215.1	-	148	19	1	1.5	109	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021374	Nup153	ENSMUST00000225894	ENSMUSP00000153196	TRANSLATION	protein_coding	start/stop	-	-	203	0	0	0	172.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021374	Nup153	ENSMUST00000182156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021374	Nup153	ENSMUST00000182914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021374	Nup153	ENSMUST00000182358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021374	Nup153	ENSMUST00000021803	ENSMUSP00000021803	TRANSLATION	protein_coding	-	CCDS26486.1	1	1462	18	2	0.5	978.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021374	Nup153	ENSMUST00000224186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021374	Nup153	ENSMUST00000183299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021374	Nup153	ENSMUST00000224062	ENSMUSP00000153069	TRANSLATION	protein_coding	start/stop	-	-	256	0	0	0	381.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021374	Nup153	ENSMUST00000224203	ENSMUSP00000153686	TRANSLATION	protein_coding	start/stop	-	-	303	14	1	0	122.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021610	Clptm1l	ENSMUST00000221130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021610	Clptm1l	ENSMUST00000222343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021610	Clptm1l	ENSMUST00000221417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021610	Clptm1l	ENSMUST00000022102	ENSMUSP00000022102	TRANSLATION	protein_coding	-	CCDS56894.1	1	539	0	0	10.8	458.4	0	0,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021218	Gdi2	ENSMUST00000222906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021218	Gdi2	ENSMUST00000221348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021218	Gdi2	ENSMUST00000222926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021218	Gdi2	ENSMUST00000221875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021218	Gdi2	ENSMUST00000221581	ENSMUSP00000152175	TRANSLATION	protein_coding	start	-	2	104	0	2.5	0	156.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021218	Gdi2	ENSMUST00000221575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021218	Gdi2	ENSMUST00000222365	ENSMUSP00000152075	TRANSLATION	protein_coding	stop	-	5	318	0	8	0	568.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021218	Gdi2	ENSMUST00000223501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021218	Gdi2	ENSMUST00000059515	ENSMUSP00000062996	TRANSLATION	protein_coding	-	-	1	409	0	10.08	0	678.2	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000021218	Gdi2	ENSMUST00000223396	ENSMUSP00000152454	TRANSLATION	protein_coding	-	CCDS36581.1	1	445	0	11.08	19.5	783.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000055194	Actbl2	ENSMUST00000054716	ENSMUSP00000052086	TRANSLATION	protein_coding	-	CCDS26768.1	-	376	24	1	21.5	486.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000092116	Gm10320	ENSMUST00000170205	ENSMUSP00000126887	TRANSLATION	protein_coding	-	-	5	113	0	1	0	69.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021510	Zfp729a	ENSMUST00000224548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021510	Zfp729a	ENSMUST00000225511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021510	Zfp729a	ENSMUST00000225608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021510	Zfp729a	ENSMUST00000012314	ENSMUSP00000012314	TRANSLATION	protein_coding	-	CCDS26617.1	1	973	114	1.2	0.5	525.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025867	Cplx2	ENSMUST00000026985	ENSMUSP00000026985	TRANSLATION	protein_coding	-	CCDS36667.1	2	134	0	1.4	21.5	145.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000036083	Slc17a3	ENSMUST00000166467	ENSMUSP00000131308	TRANSLATION	protein_coding	-	CCDS26371.1	5	498	0	1.87	1.5	156.2	14	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036083	Slc17a3	ENSMUST00000225076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036083	Slc17a3	ENSMUST00000091698	ENSMUSP00000089290	TRANSLATION	protein_coding	-	-	5	420	0	1.27	1	84.3	13	-4,-5	-	-	5.76	MINOR
ENSMUSG00000036083	Slc17a3	ENSMUST00000039721	ENSMUSP00000039062	TRANSLATION	protein_coding	-	CCDS26371.1	1	498	0	1.87	1.5	156.2	14	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036083	Slc17a3	ENSMUST00000110422	ENSMUSP00000106052	TRANSLATION	protein_coding	-	CCDS49220.1	5	462	0	1.87	1.5	156.2	14	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021391	Cenpp	ENSMUST00000221751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021391	Cenpp	ENSMUST00000021818	ENSMUSP00000021818	TRANSLATION	protein_coding	-	CCDS26501.1	1	286	0	0	1.5	285.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033991	Ttc37	ENSMUST00000224914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033991	Ttc37	ENSMUST00000224386	ENSMUSP00000153521	TRANSLATION	protein_coding	-	CCDS36735.1	-	1563	0	11.299	3.9	94.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000033991	Ttc37	ENSMUST00000223902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033991	Ttc37	ENSMUST00000225341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033991	Ttc37	ENSMUST00000223635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033991	Ttc37	ENSMUST00000224790	ENSMUSP00000153156	TRANSLATION	protein_coding	start/stop	-	-	273	0	1.02	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033991	Ttc37	ENSMUST00000225220	ENSMUSP00000153309	TRANSLATION	nonsense_mediated_decay	start	-	-	117	0	2.004	0	18.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033991	Ttc37	ENSMUST00000224289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033991	Ttc37	ENSMUST00000225147	ENSMUSP00000153556	TRANSLATION	protein_coding	start	-	-	66	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033991	Ttc37	ENSMUST00000091466	ENSMUSP00000089045	TRANSLATION	protein_coding	-	CCDS36735.1	5	1563	0	11.299	3.9	94.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094027	Gm21762	ENSMUST00000177561	ENSMUSP00000136809	TRANSLATION	protein_coding	-	-	-	151	0	0	0	264.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094027	Gm21762	ENSMUST00000225881	ENSMUSP00000153466	TRANSLATION	protein_coding	-	-	-	151	0	0	0	264.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055341	Zfp457	ENSMUST00000192242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055341	Zfp457	ENSMUST00000224325	ENSMUSP00000153220	TRANSLATION	protein_coding	start	-	-	519	60	0.4	0	187.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055341	Zfp457	ENSMUST00000225338	ENSMUSP00000153259	TRANSLATION	protein_coding	start	-	-	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055341	Zfp457	ENSMUST00000225090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055341	Zfp457	ENSMUST00000049705	ENSMUSP00000053879	TRANSLATION	protein_coding	-	CCDS36711.1	5	647	67	0.4	0.5	289.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000038080	Kdm1b	ENSMUST00000131120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038080	Kdm1b	ENSMUST00000143518	ENSMUSP00000114999	TRANSLATION	protein_coding	start	-	1	443	37	10.05	0	309.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038080	Kdm1b	ENSMUST00000037025	ENSMUSP00000038373	TRANSLATION	protein_coding	-	CCDS26489.1	1	826	49	17.75	1.5	363.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038080	Kdm1b	ENSMUST00000128977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038080	Kdm1b	ENSMUST00000143868	ENSMUSP00000117793	TRANSLATION	protein_coding	stop	-	3	176	11	4	0	36.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054266	Serpinb9d	ENSMUST00000067198	ENSMUSP00000067710	TRANSLATION	protein_coding	-	CCDS26434.1	1	377	0	6	0.5	426.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021665	Hexb	ENSMUST00000022169	ENSMUSP00000022169	TRANSLATION	protein_coding	-	CCDS26709.1	1	536	2	12.25	1.5	384.2	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021665	Hexb	ENSMUST00000222700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105830	Trgj2	ENSMUST00000197113	ENSMUSP00000143727	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000048264	Dip2c	ENSMUST00000222280	ENSMUSP00000152159	TRANSLATION	protein_coding	start	-	1	660	0	7.805	0	256.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048264	Dip2c	ENSMUST00000166299	ENSMUSP00000126827	TRANSLATION	protein_coding	-	-	5	1557	0	15.347	0	458.6	0	-4,-5	-	-	11.868	MINOR
ENSMUSG00000048264	Dip2c	ENSMUST00000169960	ENSMUSP00000131238	TRANSLATION	protein_coding	-	-	1	1527	0	13.993	0	403	0	-4,-5	-	-	5.826	MINOR
ENSMUSG00000048264	Dip2c	ENSMUST00000174552	ENSMUSP00000133806	TRANSLATION	protein_coding	-	CCDS36589.2	1	1556	0	15.413	13.8	457	0	-4,-5	-	-	15.904	PRINCIPAL:1
ENSMUSG00000090863	A530084C06Rik	ENSMUST00000170573	ENSMUSP00000129167	TRANSLATION	protein_coding	-	-	-	186	0	0	0	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000114073	Gm30302	ENSMUST00000220663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114073	Gm30302	ENSMUST00000223497	ENSMUSP00000152580	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	50.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000114073	Gm30302	ENSMUST00000220773	ENSMUSP00000152227	TRANSLATION	protein_coding	-	-	5	1110	0	0	0.5	78.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021345	Prl8a6	ENSMUST00000080762	ENSMUSP00000079584	TRANSLATION	protein_coding	-	CCDS70441.1	1	205	0	2.6	1.5	168.8	0	2,-2	-	-	9.456	MINOR
ENSMUSG00000021345	Prl8a6	ENSMUST00000110355	ENSMUSP00000105984	TRANSLATION	protein_coding	-	CCDS70442.1	1	240	0	3.2	1.5	191.2	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021345	Prl8a6	ENSMUST00000018392	ENSMUSP00000018392	TRANSLATION	protein_coding	-	CCDS26398.1	1	239	0	3.2	1.5	191.2	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000087370	Tmem170b	ENSMUST00000129449	ENSMUSP00000131144	TRANSLATION	protein_coding	-	CCDS49248.1	5	132	0	0	11.5	137.1	3	-3,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000087370	Tmem170b	ENSMUST00000221694	ENSMUSP00000152170	TRANSLATION	protein_coding	-	-	3	75	0	0	0	64.5	1	-4,-7	-	-	1.644	MINOR
ENSMUSG00000057649	Brd9	ENSMUST00000099384	ENSMUSP00000096982	TRANSLATION	protein_coding	-	CCDS36728.1	1	597	0	3.25	0.5	358	0	-4,-5	-	-	10.5	PRINCIPAL:2
ENSMUSG00000057649	Brd9	ENSMUST00000223063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000223525	ENSMUSP00000152308	TRANSLATION	protein_coding	start/stop	-	5	370	0	4	0	284	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057649	Brd9	ENSMUST00000222399	ENSMUSP00000152390	TRANSLATION	protein_coding	-	-	1	596	0	3.25	0.5	358	0	-4,-5	-	-	10.5	ALTERNATIVE:2
ENSMUSG00000057649	Brd9	ENSMUST00000223238	ENSMUSP00000152627	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0.84	0	26.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057649	Brd9	ENSMUST00000223446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000222191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000220968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000222749	ENSMUSP00000152257	TRANSLATION	protein_coding	stop	-	3	210	0	2.25	0	38.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057649	Brd9	ENSMUST00000220488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000223455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057649	Brd9	ENSMUST00000221324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046082	Tmem174	ENSMUST00000050389	ENSMUSP00000057581	TRANSLATION	protein_coding	-	CCDS26715.1	1	243	0	0	3.9	393.5	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000042379	Esm1	ENSMUST00000038144	ENSMUSP00000040187	TRANSLATION	protein_coding	-	CCDS26784.1	1	184	0	0	1.5	34.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021765	Fst	ENSMUST00000231498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021765	Fst	ENSMUST00000225068	ENSMUSP00000153451	TRANSLATION	protein_coding	start	-	-	112	0	2	0	79.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021765	Fst	ENSMUST00000223865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021765	Fst	ENSMUST00000223640	ENSMUSP00000153365	TRANSLATION	protein_coding	-	-	-	317	0	5	12.6	185.2	0	3,-1	-	-	13.636	MINOR
ENSMUSG00000021765	Fst	ENSMUST00000022287	ENSMUSP00000022287	TRANSLATION	protein_coding	-	-	1	344	0	5.75	15.8	185.2	0	3,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000021765	Fst	ENSMUST00000231252	ENSMUSP00000156375	TRANSLATION	protein_coding	-	CCDS36787.1	-	343	0	5.75	15.8	185.2	0	3,-1	-	-	16	PRINCIPAL:2
ENSMUSG00000043631	Ecm2	ENSMUST00000051504	ENSMUSP00000060402	TRANSLATION	protein_coding	-	CCDS26502.1	1	670	0	5.72	0.5	167.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000043631	Ecm2	ENSMUST00000222592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015937	Macroh2a1	ENSMUST00000137835	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015937	Macroh2a1	ENSMUST00000141031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015937	Macroh2a1	ENSMUST00000045788	ENSMUSP00000038221	TRANSLATION	protein_coding	-	CCDS49278.1	1	369	0	8	17	222.1	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000015937	Macroh2a1	ENSMUST00000154778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015937	Macroh2a1	ENSMUST00000016081	ENSMUSP00000016081	TRANSLATION	protein_coding	-	CCDS26557.1	1	372	0	8	17	215.4	0	-4,-7	-	-	15.598	PRINCIPAL:3
ENSMUSG00000015937	Macroh2a1	ENSMUST00000139511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015937	Macroh2a1	ENSMUST00000154564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015937	Macroh2a1	ENSMUST00000141589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021464	Ror2	ENSMUST00000149299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021464	Ror2	ENSMUST00000021918	ENSMUSP00000021918	TRANSLATION	protein_coding	-	CCDS26520.1	1	944	18	1.2	1.5	476.9	1	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000021464	Ror2	ENSMUST00000130235	ENSMUSP00000123362	TRANSLATION	protein_coding	-	-	1	932	18	1.2	0	476.9	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000069805	Fbp1	ENSMUST00000150013	ENSMUSP00000117146	TRANSLATION	protein_coding	start	-	5	133	9	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069805	Fbp1	ENSMUST00000092888	ENSMUSP00000090564	TRANSLATION	protein_coding	-	CCDS26590.1	1	338	36	7.08	18	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000069805	Fbp1	ENSMUST00000134814	ENSMUSP00000115703	TRANSLATION	nonsense_mediated_decay	-	-	5	57	10	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062737	Prl3d2	ENSMUST00000080755	ENSMUSP00000079579	TRANSLATION	protein_coding	-	CCDS49222.1	5	223	0	2.6	1.5	234.6	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000062737	Prl3d2	ENSMUST00000164964	ENSMUSP00000130458	TRANSLATION	protein_coding	-	-	1	224	0	2.6	1.5	234.6	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000045474	Olfr1368	ENSMUST00000216039	ENSMUSP00000149549	TRANSLATION	protein_coding	-	CCDS26269.1	3	314	0	0.42	2.7	165.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045474	Olfr1368	ENSMUST00000055298	ENSMUSP00000050942	TRANSLATION	protein_coding	-	CCDS26269.1	-	314	0	0.42	2.7	165.7	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021490	Slc34a1	ENSMUST00000224043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021490	Slc34a1	ENSMUST00000224925	ENSMUSP00000152974	TRANSLATION	protein_coding	start/stop	-	-	309	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000021490	Slc34a1	ENSMUST00000225259	ENSMUSP00000153038	TRANSLATION	protein_coding	-	CCDS49271.1	-	637	0	0	6.3	137.9	6	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000021490	Slc34a1	ENSMUST00000057167	ENSMUSP00000059138	TRANSLATION	protein_coding	-	CCDS49271.1	1	637	0	0	6.3	137.9	6	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000021490	Slc34a1	ENSMUST00000225538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021490	Slc34a1	ENSMUST00000223954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069268	H2bc7	ENSMUST00000105106	ENSMUSP00000100738	TRANSLATION	protein_coding	-	CCDS26350.1	-	126	0	1	8.8	92.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074768	Bhmt	ENSMUST00000099309	ENSMUSP00000096912	TRANSLATION	protein_coding	-	CCDS36748.1	1	407	4	7.33	10.8	170.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000074768	Bhmt	ENSMUST00000124193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061296	Vmn1r210	ENSMUST00000072044	ENSMUSP00000071925	TRANSLATION	protein_coding	-	CCDS26325.1	-	306	0	0	0.5	125	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061296	Vmn1r210	ENSMUST00000226294	ENSMUSP00000153776	TRANSLATION	protein_coding	-	CCDS26325.1	-	306	0	0	0.5	125	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061296	Vmn1r210	ENSMUST00000226180	ENSMUSP00000154333	TRANSLATION	protein_coding	-	CCDS26325.1	-	306	0	0	0.5	125	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061991	H2ac10	ENSMUST00000073261	ENSMUSP00000072989	TRANSLATION	protein_coding	-	CCDS26341.1	-	130	0	1	8.8	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000094237	AF067063	ENSMUST00000195234	ENSMUSP00000141964	TRANSLATION	protein_coding	-	CCDS56904.1	1	163	0	0	0.5	289.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094237	AF067063	ENSMUST00000179455	ENSMUSP00000136704	TRANSLATION	protein_coding	-	CCDS56904.1	-	163	0	0	0.5	289.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097333	Zfp87	ENSMUST00000181341	ENSMUSP00000137689	TRANSLATION	protein_coding	-	-	3	81	0	0.8	0	87.9	0	-4,-5	-	-	3.426	MINOR
ENSMUSG00000097333	Zfp87	ENSMUST00000180536	ENSMUSP00000137812	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	0.8	0	87.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000097333	Zfp87	ENSMUST00000181573	ENSMUSP00000138011	TRANSLATION	protein_coding	-	-	1	51	0	0.8	0	87.9	0	-4,-5	-	-	3.426	MINOR
ENSMUSG00000097333	Zfp87	ENSMUST00000181767	ENSMUSP00000138087	TRANSLATION	protein_coding	-	CCDS59588.1	1	540	60	1.4	1.5	430.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021678	F2rl1	ENSMUST00000022185	ENSMUSP00000022185	TRANSLATION	protein_coding	-	CCDS26700.1	1	399	0	0.6	0.5	142	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000005397	Nid1	ENSMUST00000222436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005397	Nid1	ENSMUST00000005532	ENSMUSP00000005532	TRANSLATION	protein_coding	-	CCDS26244.1	1	1245	4	14.38	1.5	648.7	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000005397	Nid1	ENSMUST00000222142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036181	H1f2	ENSMUST00000040914	ENSMUSP00000045816	TRANSLATION	protein_coding	-	CCDS26361.1	-	212	0	0.8	0.5	81.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099115	Gm17190	ENSMUST00000184369	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000099115	Gm17190	ENSMUST00000185178	ENSMUSP00000138965	TRANSLATION	protein_coding	-	-	-	357	0	0.6	0	46.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037966	Ninj1	ENSMUST00000120733	ENSMUSP00000114130	TRANSLATION	protein_coding	-	-	5	210	0	0	0	124.6	2	-4,-5	-	-	6	MINOR
ENSMUSG00000037966	Ninj1	ENSMUST00000049022	ENSMUSP00000036740	TRANSLATION	protein_coding	-	CCDS26497.1	1	152	0	0	7.5	124.6	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000037966	Ninj1	ENSMUST00000131280	ENSMUSP00000121186	TRANSLATION	nonsense_mediated_decay	-	-	5	110	0	0	0	87.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000037966	Ninj1	ENSMUST00000150555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037966	Ninj1	ENSMUST00000153819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056749	Nfil3	ENSMUST00000071065	ENSMUSP00000065363	TRANSLATION	protein_coding	-	CCDS26519.1	1	462	0	0	6.3	676.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000069237	Fam8a1	ENSMUST00000099547	ENSMUSP00000097144	TRANSLATION	protein_coding	-	CCDS26485.1	1	399	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000069237	Fam8a1	ENSMUST00000150376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035509	Fbxl21	ENSMUST00000124981	ENSMUSP00000114329	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035509	Fbxl21	ENSMUST00000045428	ENSMUSP00000035248	TRANSLATION	protein_coding	-	CCDS26563.1	1	434	0	4	3.9	49.7	0	-4,-2	-	-	13	PRINCIPAL:3
ENSMUSG00000035509	Fbxl21	ENSMUST00000121871	ENSMUSP00000112518	TRANSLATION	protein_coding	-	CCDS84026.1	1	460	0	4	0.5	49.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000035509	Fbxl21	ENSMUST00000128668	ENSMUSP00000115636	TRANSLATION	nonsense_mediated_decay	-	-	1	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035509	Fbxl21	ENSMUST00000121095	ENSMUSP00000112714	TRANSLATION	protein_coding	-	-	1	154	0	1.33	0	49.7	0	-4,-6	-	-	6.66	MINOR
ENSMUSG00000032745	Gpbp1	ENSMUST00000143331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032745	Gpbp1	ENSMUST00000129638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032745	Gpbp1	ENSMUST00000156221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032745	Gpbp1	ENSMUST00000047627	ENSMUSP00000048240	TRANSLATION	protein_coding	-	CCDS26769.1	1	493	0	0	1.5	143.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000032745	Gpbp1	ENSMUST00000091236	ENSMUSP00000088777	TRANSLATION	protein_coding	-	CCDS49362.1	1	473	0	0	1.5	143.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000032745	Gpbp1	ENSMUST00000136471	ENSMUSP00000123249	TRANSLATION	nonsense_mediated_decay	-	-	5	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047842	Diras2	ENSMUST00000057442	ENSMUSP00000055416	TRANSLATION	protein_coding	-	CCDS26516.1	1	199	20	1	19.5	166.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000021550	2210016F16Rik	ENSMUST00000022032	ENSMUSP00000022032	TRANSLATION	protein_coding	-	CCDS49282.1	1	338	0	0	4.1	388.6	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000078942	Naip6	ENSMUST00000042220	ENSMUSP00000041766	TRANSLATION	protein_coding	-	CCDS26728.1	1	1403	8	6.23	0.5	313.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078942	Naip6	ENSMUST00000118574	ENSMUSP00000112867	TRANSLATION	protein_coding	-	CCDS26728.1	1	1403	8	6.23	0.5	313.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005583	Mef2c	ENSMUST00000200394	ENSMUSP00000143598	TRANSLATION	protein_coding	stop	-	5	161	0	3.03	0	57.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000200138	ENSMUSP00000142715	TRANSLATION	protein_coding	start	-	5	249	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005583	Mef2c	ENSMUST00000196207	ENSMUSP00000143221	TRANSLATION	protein_coding	stop	-	5	120	0	3.33	0	27.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000198199	ENSMUSP00000143742	TRANSLATION	protein_coding	-	CCDS26664.1	1	432	0	3.33	6.4	75.3	0	-4,-7	-	-	12.452	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000199167	ENSMUSP00000142884	TRANSLATION	protein_coding	stop	-	5	227	0	3.33	0	75.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000198069	ENSMUSP00000143286	TRANSLATION	protein_coding	stop	-	5	108	0	3.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000185052	ENSMUSP00000138826	TRANSLATION	protein_coding	-	CCDS84045.1	1	472	0	3.33	16	75.3	0	-4,-7	-	-	14.852	PRINCIPAL:2
ENSMUSG00000005583	Mef2c	ENSMUST00000198217	ENSMUSP00000142487	TRANSLATION	protein_coding	-	-	5	418	0	2.58	4.6	0	0	-4,-6	-	-	4.5	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197145	ENSMUSP00000142619	TRANSLATION	protein_coding	start	-	5	152	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000196832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005583	Mef2c	ENSMUST00000199210	ENSMUSP00000142595	TRANSLATION	protein_coding	-	-	5	394	0	2.58	3.6	0	0	-4,-6	-	-	4.252	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000196730	ENSMUSP00000143338	TRANSLATION	protein_coding	stop	-	5	205	0	3.33	0	75.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000198916	ENSMUSP00000143235	TRANSLATION	protein_coding	stop	-	3	29	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000198360	ENSMUSP00000143058	TRANSLATION	nonsense_mediated_decay	start	-	2	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000198064	ENSMUSP00000142399	TRANSLATION	protein_coding	stop	-	5	126	0	3.03	0	25.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000196493	ENSMUSP00000142897	TRANSLATION	protein_coding	stop	-	5	129	0	3.03	0	29.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197146	ENSMUSP00000143227	TRANSLATION	protein_coding	-	CCDS84043.1	1	442	0	3.03	11.8	57.2	0	-4,-6	-	-	11.76	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197681	ENSMUSP00000143420	TRANSLATION	protein_coding	-	CCDS84043.1	5	442	0	3.03	11.8	57.2	0	-4,-6	-	-	11.76	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000199019	ENSMUSP00000143401	TRANSLATION	protein_coding	-	CCDS84042.1	5	474	0	3.03	14.8	57.2	0	-4,-6	-	-	12.512	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000163888	ENSMUSP00000132547	TRANSLATION	protein_coding	-	-	5	484	0	3.78	10.3	75.3	0	-4,-6	-	-	14.324	ALTERNATIVE:1
ENSMUSG00000005583	Mef2c	ENSMUST00000195904	ENSMUSP00000143339	TRANSLATION	protein_coding	stop	-	3	169	0	3.03	0	57.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000200123	ENSMUSP00000142833	TRANSLATION	protein_coding	stop	-	3	23	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197722	ENSMUSP00000142456	TRANSLATION	protein_coding	-	-	5	400	0	3.03	0	57.2	0	-4,-6	-	-	9.06	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000199262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005583	Mef2c	ENSMUST00000199450	ENSMUSP00000143315	TRANSLATION	protein_coding	-	CCDS49320.1	1	466	0	3.03	10.8	57.2	0	-4,-6	-	-	11.512	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000195984	ENSMUSP00000143611	TRANSLATION	protein_coding	stop	-	3	194	0	3.03	0	57.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000199105	ENSMUSP00000143212	TRANSLATION	protein_coding	-	CCDS84042.1	5	474	0	3.03	14.8	57.2	0	-4,-6	-	-	12.512	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000197938	ENSMUSP00000143187	TRANSLATION	protein_coding	stop	-	5	242	0	3.33	0	75.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005583	Mef2c	ENSMUST00000005722	ENSMUSP00000005722	TRANSLATION	protein_coding	-	-	5	464	0	3.33	17	75.3	0	-4,-7	-	-	15.1	ALTERNATIVE:1
ENSMUSG00000005583	Mef2c	ENSMUST00000199432	ENSMUSP00000142714	TRANSLATION	protein_coding	-	CCDS84044.1	1	434	0	3.03	12.8	57.2	0	-4,-6	-	-	12.012	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000222429	ENSMUSP00000152461	TRANSLATION	protein_coding	-	-	3	100	0	1.15	0	82.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000221303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074865	Zfp934	ENSMUST00000220648	ENSMUSP00000152492	TRANSLATION	protein_coding	-	-	5	441	50	4.95	0	313.5	0	-4,-5	-	-	11.454	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000222746	ENSMUSP00000152804	TRANSLATION	protein_coding	-	-	1	159	0	1.5	0.5	75.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000101547	ENSMUSP00000099083	TRANSLATION	protein_coding	-	-	5	473	50	5.95	0.5	389.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074865	Zfp934	ENSMUST00000221250	ENSMUSP00000152631	TRANSLATION	nonsense_mediated_decay	-	-	5	61	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000221494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074865	Zfp934	ENSMUST00000082203	ENSMUSP00000080837	TRANSLATION	protein_coding	-	-	5	330	34	3.95	0.5	218.3	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000074865	Zfp934	ENSMUST00000221279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074865	Zfp934	ENSMUST00000222852	ENSMUSP00000152181	TRANSLATION	protein_coding	stop	-	3	125	2	1.95	0	75.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021567	Nkd2	ENSMUST00000118096	ENSMUSP00000113794	TRANSLATION	protein_coding	-	CCDS84036.1	1	449	5	1	0.5	0	0	-4,-7	-	-	11	ALTERNATIVE:2
ENSMUSG00000021567	Nkd2	ENSMUST00000022051	ENSMUSP00000022051	TRANSLATION	protein_coding	-	CCDS26636.1	1	461	5	1	0.5	0	0	-4,-7	-	-	11	PRINCIPAL:3
ENSMUSG00000021567	Nkd2	ENSMUST00000222004	ENSMUSP00000152231	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021567	Nkd2	ENSMUST00000221679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021567	Nkd2	ENSMUST00000138899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069296	Vmn1r195	ENSMUST00000228711	ENSMUSP00000154274	TRANSLATION	protein_coding	-	CCDS26314.1	-	316	0	0	0.5	135.4	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069296	Vmn1r195	ENSMUST00000091736	ENSMUSP00000089330	TRANSLATION	protein_coding	-	CCDS26314.1	-	316	0	0	0.5	135.4	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060981	H4c8	ENSMUST00000102972	ENSMUSP00000100037	TRANSLATION	protein_coding	-	CCDS26340.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021347	Prl7b1	ENSMUST00000080595	ENSMUSP00000079431	TRANSLATION	protein_coding	-	CCDS26402.1	1	251	0	3.08	1.5	196.1	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000021670	Hmgcr	ENSMUST00000170287	ENSMUSP00000128939	TRANSLATION	protein_coding	-	-	1	819	16	11.683	0	484.8	8	-3,-7	-	-	9.504	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000168855	ENSMUSP00000126087	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	0	2	-3,-7	-	-	-1	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000172440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021670	Hmgcr	ENSMUST00000168374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021670	Hmgcr	ENSMUST00000022176	ENSMUSP00000022176	TRANSLATION	protein_coding	-	CCDS26706.1	1	887	18	13.183	2.7	554.2	9	-3,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021670	Hmgcr	ENSMUST00000169196	ENSMUSP00000132749	TRANSLATION	protein_coding	stop	-	3	210	0	1.675	0	50	7	-3,-7	-	-	-1	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000169966	ENSMUSP00000128294	TRANSLATION	protein_coding	stop	-	3	91	0	0.36	0	0	4	-3,-6	-	-	-1	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000163201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021670	Hmgcr	ENSMUST00000169202	ENSMUSP00000132155	TRANSLATION	protein_coding	start/stop	-	5	218	11	5.33	0	212.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000169945	ENSMUSP00000128642	TRANSLATION	protein_coding	start	-	5	165	3	4.16	0	118.1	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000021670	Hmgcr	ENSMUST00000171537	ENSMUSP00000126959	TRANSLATION	protein_coding	stop	-	3	100	0	0.36	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000025453	Nnt	ENSMUST00000109204	ENSMUSP00000104827	TRANSLATION	protein_coding	-	-	5	713	21	7.94	0	615.8	15	-3,-1	-	-	0	MINOR
ENSMUSG00000025453	Nnt	ENSMUST00000133627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025453	Nnt	ENSMUST00000069902	ENSMUSP00000070564	TRANSLATION	protein_coding	-	-	1	721	41	10.78	0	823.2	9	-3,-1	-	-	14.334	MINOR
ENSMUSG00000025453	Nnt	ENSMUST00000144599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025453	Nnt	ENSMUST00000099149	ENSMUSP00000096753	TRANSLATION	protein_coding	-	CCDS84067.1	1	835	42	10.94	0.5	867.9	15	-3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000049737	Olfr1361	ENSMUST00000055615	ENSMUSP00000062356	TRANSLATION	protein_coding	-	CCDS26284.1	-	317	0	0.32	4.1	174.9	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000049737	Olfr1361	ENSMUST00000214321	ENSMUSP00000150315	TRANSLATION	protein_coding	-	CCDS26284.1	5	317	0	0.32	4.1	174.9	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000069305	Hist1h4n	ENSMUST00000102979	ENSMUSP00000100044	TRANSLATION	protein_coding	-	CCDS26300.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000069274	H4c6	ENSMUST00000102971	ENSMUSP00000100036	TRANSLATION	protein_coding	-	CCDS26345.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000104962	Trgj1	ENSMUST00000200495	ENSMUSP00000143192	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000034751	Mast4	ENSMUST00000164111	ENSMUSP00000126625	TRANSLATION	protein_coding	-	-	2	254	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034751	Mast4	ENSMUST00000211607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034751	Mast4	ENSMUST00000166336	ENSMUSP00000126516	TRANSLATION	protein_coding	stop	-	3	198	0	0	0	212.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034751	Mast4	ENSMUST00000239261	ENSMUSP00000159269	TRANSLATION	protein_coding	-	-	-	2444	21	5.98	0	680.4	0	-4,-7	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000034751	Mast4	ENSMUST00000171791	ENSMUSP00000131651	TRANSLATION	protein_coding	-	-	5	2426	21	5.98	0.5	680.4	0	-4,-6	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000034751	Mast4	ENSMUST00000194446	ENSMUSP00000141977	TRANSLATION	protein_coding	-	-	5	2431	21	5.98	0.5	680.4	0	-4,-7	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000034751	Mast4	ENSMUST00000168226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034751	Mast4	ENSMUST00000187024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000164211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000185947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000185314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000171358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034751	Mast4	ENSMUST00000169605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000166867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000172264	ENSMUSP00000128129	TRANSLATION	protein_coding	stop	-	5	868	21	5.98	0	648.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034751	Mast4	ENSMUST00000167058	ENSMUSP00000128464	TRANSLATION	protein_coding	-	CCDS49349.1	1	2618	21	5.98	0.5	680.4	0	-4,-5	-	-	17.736	PRINCIPAL:2
ENSMUSG00000034751	Mast4	ENSMUST00000099202	ENSMUSP00000096808	TRANSLATION	protein_coding	-	-	5	2441	21	5.98	0.5	684.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000034751	Mast4	ENSMUST00000191417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034751	Mast4	ENSMUST00000166726	ENSMUSP00000132263	TRANSLATION	protein_coding	-	-	5	1210	21	5.98	0	680.4	0	-4,-5	-	-	17.736	ALTERNATIVE:2
ENSMUSG00000034751	Mast4	ENSMUST00000167462	ENSMUSP00000131910	TRANSLATION	protein_coding	stop	-	5	993	21	5.98	0	680.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000706	Btn1a1	ENSMUST00000110434	ENSMUSP00000106064	TRANSLATION	protein_coding	-	-	1	179	0	1	0	52.7	0	3,-1	-	-	0.246	MINOR
ENSMUSG00000000706	Btn1a1	ENSMUST00000225831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000706	Btn1a1	ENSMUST00000041674	ENSMUSP00000041013	TRANSLATION	protein_coding	-	CCDS26339.1	1	524	0	3.876	0.5	232.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021708	Rasgrf2	ENSMUST00000149630	ENSMUSP00000115562	TRANSLATION	protein_coding	start/stop	-	5	168	0	1.57	0	80.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021708	Rasgrf2	ENSMUST00000142378	ENSMUSP00000115401	TRANSLATION	protein_coding	start	-	1	252	0	0.2	0	75.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021708	Rasgrf2	ENSMUST00000151408	ENSMUSP00000116892	TRANSLATION	protein_coding	start	-	1	588	0	7.69	0	270.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021708	Rasgrf2	ENSMUST00000099326	ENSMUSP00000096930	TRANSLATION	protein_coding	-	-	5	1188	0	11.78	0	434.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021708	Rasgrf2	ENSMUST00000146492	ENSMUSP00000116203	TRANSLATION	protein_coding	stop	-	5	387	0	2.39	0	136.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021708	Rasgrf2	ENSMUST00000216219	ENSMUSP00000149731	TRANSLATION	protein_coding	-	-	5	505	0	3.79	0	167.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000051335	Gfod1	ENSMUST00000222779	ENSMUSP00000152216	TRANSLATION	protein_coding	start	-	1	70	0	0.8	0	24.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051335	Gfod1	ENSMUST00000055341	ENSMUSP00000062662	TRANSLATION	protein_coding	-	CCDS26477.1	1	390	0	1.7	11.8	42	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000071909	Nutm2	ENSMUST00000096633	ENSMUSP00000094390	TRANSLATION	protein_coding	-	CCDS26507.1	1	733	0	0	0.5	910	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000047117	Ankdd1b	ENSMUST00000181276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047117	Ankdd1b	ENSMUST00000239026	ENSMUSP00000159079	TRANSLATION	protein_coding	-	-	-	521	0	10.334	0	173.4	0	-4,-2	-	-	9.192	MINOR
ENSMUSG00000047117	Ankdd1b	ENSMUST00000181074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047117	Ankdd1b	ENSMUST00000181613	ENSMUSP00000159018	TRANSLATION	protein_coding	stop	-	5	205	0	4.24	0	82.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047117	Ankdd1b	ENSMUST00000239137	ENSMUSP00000158881	TRANSLATION	nonsense_mediated_decay	-	-	-	70	0	0.14	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047117	Ankdd1b	ENSMUST00000238922	ENSMUSP00000158973	TRANSLATION	nonsense_mediated_decay	-	-	-	80	0	0.14	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047117	Ankdd1b	ENSMUST00000181822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047117	Ankdd1b	ENSMUST00000181761	ENSMUSP00000158897	TRANSLATION	protein_coding	start	-	1	97	0	2.064	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047117	Ankdd1b	ENSMUST00000055607	ENSMUSP00000061643	TRANSLATION	protein_coding	-	-	1	554	0	11.334	1.5	186.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000101355	H3c10	ENSMUST00000188775	ENSMUSP00000140394	TRANSLATION	protein_coding	-	CCDS26289.1	-	136	0	1	11.7	183.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000035248	Tut7	ENSMUST00000071703	ENSMUSP00000071623	TRANSLATION	protein_coding	-	CCDS36689.1	1	1474	32	7.68	0.5	314.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035248	Tut7	ENSMUST00000224845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035248	Tut7	ENSMUST00000225987	ENSMUSP00000153202	TRANSLATION	protein_coding	stop	-	-	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035248	Tut7	ENSMUST00000224480	ENSMUSP00000153376	TRANSLATION	protein_coding	start	-	-	1089	26	7.68	0	314.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035248	Tut7	ENSMUST00000224320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035248	Tut7	ENSMUST00000225241	ENSMUSP00000153412	TRANSLATION	nonsense_mediated_decay	start	-	-	148	8	1.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035248	Tut7	ENSMUST00000225576	ENSMUSP00000153310	TRANSLATION	protein_coding	-	-	-	210	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035248	Tut7	ENSMUST00000225944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035248	Tut7	ENSMUST00000225179	ENSMUSP00000153353	TRANSLATION	protein_coding	stop	-	-	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035248	Tut7	ENSMUST00000225607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096284	Tcstv1	ENSMUST00000190512	ENSMUSP00000140041	TRANSLATION	protein_coding	-	CCDS56905.1	1	171	0	0	0.5	296.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096284	Tcstv1	ENSMUST00000178510	ENSMUSP00000137348	TRANSLATION	protein_coding	-	CCDS56905.1	-	171	0	0	0.5	296.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052981	Ube2ql1	ENSMUST00000065118	ENSMUSP00000070906	TRANSLATION	protein_coding	-	CCDS49307.1	1	304	0	1.24	1.5	43.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021721	Htr1a	ENSMUST00000022235	ENSMUSP00000022235	TRANSLATION	protein_coding	-	CCDS26756.1	-	421	0	0.56	5.1	296.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000021613	Hapln1	ENSMUST00000225678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021613	Hapln1	ENSMUST00000022108	ENSMUSP00000022108	TRANSLATION	protein_coding	-	CCDS26671.1	1	356	0	1.28	8.8	244.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000069184	Zfp72	ENSMUST00000091481	ENSMUSP00000089063	TRANSLATION	protein_coding	-	CCDS36732.1	1	435	51	0.6	0.5	265.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000069184	Zfp72	ENSMUST00000223163	ENSMUSP00000152502	TRANSLATION	protein_coding	-	CCDS36732.1	5	435	51	0.6	0.5	265.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021147	Wdr37	ENSMUST00000176329	ENSMUSP00000135101	TRANSLATION	protein_coding	stop	-	5	185	0	3.85	0	49	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000177404	ENSMUSP00000135785	TRANSLATION	protein_coding	stop	-	3	30	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000177537	ENSMUSP00000135577	TRANSLATION	nonsense_mediated_decay	start	-	5	66	0	1.594	0	26.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000177409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021147	Wdr37	ENSMUST00000177112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021147	Wdr37	ENSMUST00000175687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021147	Wdr37	ENSMUST00000176715	ENSMUSP00000134987	TRANSLATION	nonsense_mediated_decay	-	-	5	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000221401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021147	Wdr37	ENSMUST00000175958	ENSMUSP00000135182	TRANSLATION	protein_coding	stop	-	5	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000054251	ENSMUSP00000062174	TRANSLATION	protein_coding	-	CCDS26232.1	5	496	0	7.914	17	104.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021147	Wdr37	ENSMUST00000176429	ENSMUSP00000134916	TRANSLATION	protein_coding	start/stop	-	5	193	0	4.46	0	71.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000021572	ENSMUSP00000021572	TRANSLATION	protein_coding	-	CCDS26232.1	1	496	0	7.914	17	104.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021147	Wdr37	ENSMUST00000176587	ENSMUSP00000135271	TRANSLATION	protein_coding	start	-	3	133	0	1.09	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000176098	ENSMUSP00000135094	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	2.424	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000176922	ENSMUSP00000135742	TRANSLATION	protein_coding	-	CCDS49204.1	1	170	0	1.09	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000176813	ENSMUSP00000135097	TRANSLATION	protein_coding	stop	-	5	179	0	2.02	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021147	Wdr37	ENSMUST00000164183	ENSMUSP00000131469	TRANSLATION	protein_coding	-	CCDS49204.1	1	170	0	1.09	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000033499	Larp4b	ENSMUST00000188211	ENSMUSP00000140993	TRANSLATION	protein_coding	-	CCDS36588.1	1	741	0	2.75	3.9	52.9	0	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000033499	Larp4b	ENSMUST00000189330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033499	Larp4b	ENSMUST00000188939	ENSMUSP00000139578	TRANSLATION	protein_coding	-	-	1	663	0	2.75	0	52.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033499	Larp4b	ENSMUST00000188523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033499	Larp4b	ENSMUST00000190331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033499	Larp4b	ENSMUST00000190041	ENSMUSP00000139927	TRANSLATION	protein_coding	stop	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033499	Larp4b	ENSMUST00000091829	ENSMUSP00000089437	TRANSLATION	protein_coding	-	CCDS79162.1	1	657	0	2.75	0.5	52.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000038132	Rbm24	ENSMUST00000037923	ENSMUSP00000043120	TRANSLATION	protein_coding	-	CCDS36651.1	2	236	0	2.3	6.3	63	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038132	Rbm24	ENSMUST00000225221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038132	Rbm24	ENSMUST00000225890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038132	Rbm24	ENSMUST00000225727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038132	Rbm24	ENSMUST00000224638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025869	Nop16	ENSMUST00000026987	ENSMUSP00000026987	TRANSLATION	protein_coding	-	CCDS26531.1	1	178	0	0	7.5	58.5	0	-4,-7	-	-	8.982	PRINCIPAL:1
ENSMUSG00000025869	Nop16	ENSMUST00000149462	ENSMUSP00000114954	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025869	Nop16	ENSMUST00000148222	ENSMUSP00000122180	TRANSLATION	protein_coding	-	-	5	181	0	0	0	58.7	0	-4,-7	-	-	6	MINOR
ENSMUSG00000043986	Spata31d1d	ENSMUST00000052978	ENSMUSP00000128200	TRANSLATION	protein_coding	-	CCDS49286.1	2	1247	0	0	0.5	385	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021483	Cdk20	ENSMUST00000223419	ENSMUSP00000152554	TRANSLATION	nonsense_mediated_decay	start	-	3	48	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021483	Cdk20	ENSMUST00000021939	ENSMUSP00000021939	TRANSLATION	protein_coding	-	CCDS26601.1	1	346	20	7.19	10.8	221.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021483	Cdk20	ENSMUST00000223121	ENSMUSP00000152171	TRANSLATION	nonsense_mediated_decay	-	-	1	188	20	4.66	0	173	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021483	Cdk20	ENSMUST00000223279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021483	Cdk20	ENSMUST00000222576	ENSMUSP00000152425	TRANSLATION	nonsense_mediated_decay	start	-	3	159	19	3.83	0	134.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021483	Cdk20	ENSMUST00000222470	ENSMUSP00000152809	TRANSLATION	nonsense_mediated_decay	start	-	5	71	5	1.83	0	87.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021483	Cdk20	ENSMUST00000223011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021483	Cdk20	ENSMUST00000220992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021483	Cdk20	ENSMUST00000222562	ENSMUSP00000152606	TRANSLATION	nonsense_mediated_decay	start	-	5	320	13	6.36	0	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021363	Mak	ENSMUST00000070193	ENSMUSP00000064750	TRANSLATION	protein_coding	-	CCDS49244.1	1	550	19	5.67	0.5	204.7	0	-4,-5	-	-	13.026	MINOR
ENSMUSG00000021363	Mak	ENSMUST00000225789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021363	Mak	ENSMUST00000165087	ENSMUSP00000129615	TRANSLATION	protein_coding	-	CCDS49245.1	1	646	19	6.27	0.5	267.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021363	Mak	ENSMUST00000224423	ENSMUSP00000152961	TRANSLATION	protein_coding	stop	-	-	194	19	4.72	0	214.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021363	Mak	ENSMUST00000225084	ENSMUSP00000152946	TRANSLATION	protein_coding	-	CCDS49245.1	-	646	19	6.27	0.5	267.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021363	Mak	ENSMUST00000225906	ENSMUSP00000153176	TRANSLATION	protein_coding	start	-	-	168	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021363	Mak	ENSMUST00000224740	ENSMUSP00000153314	TRANSLATION	protein_coding	-	-	-	621	19	6.27	0.5	267.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021363	Mak	ENSMUST00000021792	ENSMUSP00000021792	TRANSLATION	protein_coding	-	CCDS26471.1	1	622	19	6.27	1.5	267.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000038546	Ranbp9	ENSMUST00000220500	ENSMUSP00000152415	TRANSLATION	nonsense_mediated_decay	start	-	3	148	0	2.594	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000038546	Ranbp9	ENSMUST00000222651	ENSMUSP00000152620	TRANSLATION	protein_coding	-	-	1	546	0	5.056	0	279.9	0	-4,-6	-	-	10.134	MINOR
ENSMUSG00000038546	Ranbp9	ENSMUST00000220529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038546	Ranbp9	ENSMUST00000220601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038546	Ranbp9	ENSMUST00000222023	ENSMUSP00000152077	TRANSLATION	protein_coding	stop	-	5	64	0	1.5	0	39.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038546	Ranbp9	ENSMUST00000144326	ENSMUSP00000130636	TRANSLATION	protein_coding	-	CCDS49252.1	5	710	0	5.99	0.5	279.9	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000038546	Ranbp9	ENSMUST00000221092	ENSMUSP00000152869	TRANSLATION	protein_coding	start	-	5	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038546	Ranbp9	ENSMUST00000222239	ENSMUSP00000152113	TRANSLATION	nonsense_mediated_decay	start	-	5	96	0	2.16	0	53.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096175	Gm21761	ENSMUST00000187530	ENSMUSP00000141043	TRANSLATION	protein_coding	-	CCDS79246.1	1	171	0	0	0.5	312.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096175	Gm21761	ENSMUST00000179502	ENSMUSP00000136787	TRANSLATION	protein_coding	-	CCDS79246.1	-	171	0	0	0.5	312.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021635	Rad17	ENSMUST00000225428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021635	Rad17	ENSMUST00000226050	ENSMUSP00000152977	TRANSLATION	nonsense_mediated_decay	-	-	-	229	3	0.58	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021635	Rad17	ENSMUST00000225155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021635	Rad17	ENSMUST00000022136	ENSMUSP00000022136	TRANSLATION	protein_coding	-	CCDS26733.1	1	688	16	2.67	1.5	728.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021635	Rad17	ENSMUST00000177848	ENSMUSP00000136292	TRANSLATION	protein_coding	-	CCDS26733.1	1	688	16	2.67	1.5	728.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047889	Serpinb6d	ENSMUST00000221681	ENSMUSP00000152621	TRANSLATION	protein_coding	-	CCDS36631.1	1	375	0	5.6	0.5	391.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047889	Serpinb6d	ENSMUST00000059637	ENSMUSP00000063025	TRANSLATION	protein_coding	-	CCDS36631.1	1	375	0	5.6	0.5	391.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000016982	Pom121l2	ENSMUST00000117882	ENSMUSP00000113688	TRANSLATION	protein_coding	-	CCDS49216.1	1	469	0	0	0.5	77.1	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000016982	Pom121l2	ENSMUST00000017126	ENSMUSP00000017126	TRANSLATION	protein_coding	-	CCDS49217.1	-	972	0	0	0.5	75.3	0	-4,-2	-	-	5.862	ALTERNATIVE:2
ENSMUSG00000021764	Ndufs4	ENSMUST00000225707	ENSMUSP00000153059	TRANSLATION	nonsense_mediated_decay	start	-	-	35	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021764	Ndufs4	ENSMUST00000225701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021764	Ndufs4	ENSMUST00000022286	ENSMUSP00000022286	TRANSLATION	protein_coding	-	CCDS49368.1	1	175	0	3.5	7.5	132.5	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000021764	Ndufs4	ENSMUST00000225035	ENSMUSP00000153334	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021764	Ndufs4	ENSMUST00000232101	ENSMUSP00000156276	TRANSLATION	protein_coding	start	-	-	118	0	1.75	2.4	60.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021764	Ndufs4	ENSMUST00000225978	ENSMUSP00000155936	TRANSLATION	protein_coding	start	-	-	55	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000052485	Tmem171	ENSMUST00000148950	ENSMUSP00000121382	TRANSLATION	protein_coding	stop	-	2	109	0	0	0	179.6	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000052485	Tmem171	ENSMUST00000064347	ENSMUSP00000070369	TRANSLATION	protein_coding	-	CCDS26716.1	1	322	0	0	1.5	546.4	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044231	Nhlrc1	ENSMUST00000052747	ENSMUSP00000054990	TRANSLATION	protein_coding	-	CCDS26487.1	-	401	8	0.28	0.5	30	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063998	Vmn1r211	ENSMUST00000073728	ENSMUSP00000073405	TRANSLATION	protein_coding	-	CCDS26326.1	-	298	0	0	0.5	133.9	6	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000063998	Vmn1r211	ENSMUST00000228645	ENSMUSP00000154146	TRANSLATION	protein_coding	-	CCDS26326.1	-	298	0	0	0.5	133.9	6	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000021573	Tppp	ENSMUST00000022057	ENSMUSP00000022057	TRANSLATION	protein_coding	-	CCDS26638.1	1	218	0	2.8	7.9	224	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021573	Tppp	ENSMUST00000140217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060739	Nsa2	ENSMUST00000224980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060739	Nsa2	ENSMUST00000073456	ENSMUSP00000073161	TRANSLATION	protein_coding	-	CCDS36756.1	1	260	0	2.7	19.5	164.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060739	Nsa2	ENSMUST00000225410	ENSMUSP00000153113	TRANSLATION	protein_coding	-	-	-	233	0	1.95	0	105.1	0	-4,-5	-	-	6.756	MINOR
ENSMUSG00000069303	Hist1h2br	ENSMUST00000110467	ENSMUSP00000106093	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	1	8.8	92.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069303	Hist1h2br	ENSMUST00000180288	ENSMUSP00000136792	TRANSLATION	protein_coding	-	CCDS49215.1	1	134	0	1	0.5	92.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046573	Lyrm4	ENSMUST00000053265	ENSMUSP00000060779	TRANSLATION	protein_coding	-	CCDS36633.1	1	91	0	0	11.8	84.9	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000074870	Cts3	ENSMUST00000223815	ENSMUSP00000153399	TRANSLATION	protein_coding	-	CCDS36695.1	-	332	4	7.23	0.5	276.7	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000074870	Cts3	ENSMUST00000224967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074870	Cts3	ENSMUST00000054702	ENSMUSP00000058359	TRANSLATION	protein_coding	-	CCDS36695.1	1	332	4	7.23	0.5	276.7	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000074870	Cts3	ENSMUST00000224050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074870	Cts3	ENSMUST00000224855	ENSMUSP00000153683	TRANSLATION	nonsense_mediated_decay	-	-	-	142	0	2.798	0	56.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000074870	Cts3	ENSMUST00000225515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021702	Thbs4	ENSMUST00000168299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021702	Thbs4	ENSMUST00000022213	ENSMUSP00000022213	TRANSLATION	protein_coding	-	CCDS26684.1	1	963	122	14	5.1	667.3	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000034334	Fam151b	ENSMUST00000225299	ENSMUSP00000153204	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034334	Fam151b	ENSMUST00000040106	ENSMUSP00000045024	TRANSLATION	protein_coding	-	CCDS49327.1	1	279	0	0	0.5	329.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045022	H2bl1	ENSMUST00000054425	ENSMUSP00000053046	TRANSLATION	protein_coding	-	CCDS49342.1	-	123	0	0.8	1.5	78.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021629	Slc30a5	ENSMUST00000067246	ENSMUSP00000065764	TRANSLATION	protein_coding	-	CCDS26739.1	1	761	0	1.45	0.5	164.4	14	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021629	Slc30a5	ENSMUST00000225086	ENSMUSP00000153319	TRANSLATION	nonsense_mediated_decay	start	-	-	153	0	0	0	0	6	-2,-4	-	-	-1	MINOR
ENSMUSG00000021629	Slc30a5	ENSMUST00000225922	ENSMUSP00000153587	TRANSLATION	protein_coding	-	-	-	704	0	1.45	0	164.4	13	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021629	Slc30a5	ENSMUST00000225129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021629	Slc30a5	ENSMUST00000224177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038518	Jarid2	ENSMUST00000172830	ENSMUSP00000133653	TRANSLATION	protein_coding	stop	-	3	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000174394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038518	Jarid2	ENSMUST00000174068	ENSMUSP00000134593	TRANSLATION	protein_coding	stop	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000173003	ENSMUSP00000134302	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000173367	ENSMUSP00000134658	TRANSLATION	protein_coding	stop	-	5	507	0	0	0	49.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000172924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038518	Jarid2	ENSMUST00000173704	ENSMUSP00000134675	TRANSLATION	protein_coding	-	CCDS36646.1	1	1234	4	6.27	1.5	250.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038518	Jarid2	ENSMUST00000174683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038518	Jarid2	ENSMUST00000172977	ENSMUSP00000134276	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000173906	ENSMUSP00000134630	TRANSLATION	protein_coding	stop	-	1	1029	0	5.57	0	217.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000172581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038518	Jarid2	ENSMUST00000172708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038518	Jarid2	ENSMUST00000174086	ENSMUSP00000133812	TRANSLATION	protein_coding	stop	-	5	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038518	Jarid2	ENSMUST00000174557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038518	Jarid2	ENSMUST00000044608	ENSMUSP00000037774	TRANSLATION	protein_coding	-	CCDS36646.1	1	1234	4	6.27	1.5	250.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038518	Jarid2	ENSMUST00000173246	ENSMUSP00000134205	TRANSLATION	protein_coding	-	CCDS36646.1	1	1234	4	6.27	1.5	250.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021668	Polk	ENSMUST00000222389	ENSMUSP00000152192	TRANSLATION	protein_coding	-	-	1	467	19	10.174	0	185	0	-4,-5	-	-	12.354	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000221645	ENSMUSP00000152178	TRANSLATION	protein_coding	-	-	1	547	19	11.174	0	207.4	0	-4,-5	-	-	15.696	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000022172	ENSMUSP00000022172	TRANSLATION	protein_coding	-	CCDS26704.1	1	852	19	11.974	1.5	219.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021668	Polk	ENSMUST00000222075	ENSMUSP00000152139	TRANSLATION	nonsense_mediated_decay	-	-	1	237	17	5.33	0	118.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000222100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021668	Polk	ENSMUST00000221899	ENSMUSP00000152647	TRANSLATION	protein_coding	-	-	1	772	19	10.974	0	196.7	0	-4,-5	-	-	14.658	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000223475	ENSMUSP00000152658	TRANSLATION	protein_coding	stop	-	5	169	13	4	0	74.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000222143	ENSMUSP00000152468	TRANSLATION	nonsense_mediated_decay	-	-	1	275	19	6.33	0	130.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000222268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021668	Polk	ENSMUST00000091387	ENSMUSP00000088950	TRANSLATION	protein_coding	-	CCDS84053.1	1	793	19	11.124	0.5	187.4	0	-4,-5	-	-	14.4	MINOR
ENSMUSG00000021668	Polk	ENSMUST00000220977	ENSMUSP00000152322	TRANSLATION	nonsense_mediated_decay	-	-	1	453	19	9.41	0	182.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036006	Ripor2	ENSMUST00000038477	ENSMUSP00000043663	TRANSLATION	protein_coding	-	CCDS36623.1	1	672	0	0	0.5	569.8	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000036006	Ripor2	ENSMUST00000058009	ENSMUSP00000051342	TRANSLATION	protein_coding	-	-	2	389	0	0	0	568.9	0	-4,-1	-	-	5.946	ALTERNATIVE:2
ENSMUSG00000036006	Ripor2	ENSMUST00000177298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000177174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000134370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000110383	ENSMUSP00000106012	TRANSLATION	protein_coding	-	CCDS70438.1	1	1053	0	0	1.5	569.8	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000036006	Ripor2	ENSMUST00000238974	ENSMUSP00000159186	TRANSLATION	protein_coding	-	-	-	639	0	0	1.5	568.8	0	-4,0	-	-	5.94	ALTERNATIVE:2
ENSMUSG00000036006	Ripor2	ENSMUST00000091694	ENSMUSP00000089286	TRANSLATION	protein_coding	-	CCDS26377.2	1	633	0	0	0.5	568.8	0	-4,-5	-	-	5.94	PRINCIPAL:3
ENSMUSG00000036006	Ripor2	ENSMUST00000177489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000132689	ENSMUSP00000115689	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036006	Ripor2	ENSMUST00000176303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000110384	ENSMUSP00000106013	TRANSLATION	protein_coding	-	CCDS36622.1	1	1078	0	0	1.5	569.8	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000036006	Ripor2	ENSMUST00000138547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036006	Ripor2	ENSMUST00000175986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000114279	H2bc14	ENSMUST00000224651	ENSMUSP00000153457	TRANSLATION	protein_coding	-	CCDS26290.1	-	126	0	1	7.5	91	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042284	Itga1	ENSMUST00000061673	ENSMUSP00000077132	TRANSLATION	protein_coding	-	CCDS36788.1	1	1179	22	16.99	7.5	402.8	0	0,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000042284	Itga1	ENSMUST00000224865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042284	Itga1	ENSMUST00000224493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042284	Itga1	ENSMUST00000224541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042284	Itga1	ENSMUST00000224119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042284	Itga1	ENSMUST00000224268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021587	Pcsk1	ENSMUST00000135349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021587	Pcsk1	ENSMUST00000222727	ENSMUSP00000152702	TRANSLATION	protein_coding	start/stop	-	5	155	2	3	0	42	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021587	Pcsk1	ENSMUST00000022075	ENSMUSP00000022075	TRANSLATION	protein_coding	-	CCDS26649.1	1	753	19	12.16	3.9	428.5	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000021214	Akr1c18	ENSMUST00000110704	ENSMUSP00000106332	TRANSLATION	protein_coding	-	CCDS84006.1	1	297	28	7	0.5	162.5	0	-4,-5	-	-	15.654	MINOR
ENSMUSG00000021214	Akr1c18	ENSMUST00000021635	ENSMUSP00000021635	TRANSLATION	protein_coding	-	CCDS26219.1	1	323	28	7.75	1.5	176.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069302	H2ac12	ENSMUST00000091742	ENSMUSP00000089336	TRANSLATION	protein_coding	-	CCDS26304.1	-	128	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000033114	Slc35d2	ENSMUST00000222168	ENSMUSP00000152615	TRANSLATION	protein_coding	-	-	3	129	0	0	0	0	4	-4,-7	-	-	0	MINOR
ENSMUSG00000033114	Slc35d2	ENSMUST00000222692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033114	Slc35d2	ENSMUST00000223461	ENSMUSP00000152713	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000033114	Slc35d2	ENSMUST00000222794	ENSMUSP00000152555	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000033114	Slc35d2	ENSMUST00000220792	ENSMUSP00000152341	TRANSLATION	protein_coding	-	-	1	283	0	0	1.5	67.9	12	-4,-7	-	-	5.118	MINOR
ENSMUSG00000033114	Slc35d2	ENSMUST00000221572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033114	Slc35d2	ENSMUST00000099441	ENSMUSP00000097040	TRANSLATION	protein_coding	-	CCDS26595.1	1	326	0	0	1.5	79.6	14	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033114	Slc35d2	ENSMUST00000222866	ENSMUSP00000152570	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	33.3	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000047789	Slc38a9	ENSMUST00000223581	ENSMUSP00000152914	TRANSLATION	nonsense_mediated_decay	-	-	-	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047789	Slc38a9	ENSMUST00000052514	ENSMUSP00000052172	TRANSLATION	protein_coding	-	CCDS26775.1	1	560	0	0	8.3	106.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000047789	Slc38a9	ENSMUST00000223839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047789	Slc38a9	ENSMUST00000225649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047789	Slc38a9	ENSMUST00000225367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047789	Slc38a9	ENSMUST00000224252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047789	Slc38a9	ENSMUST00000223674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047789	Slc38a9	ENSMUST00000224703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051627	H1f4	ENSMUST00000062045	ENSMUSP00000057308	TRANSLATION	protein_coding	-	CCDS26355.1	-	219	0	0.6	0.5	81.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045410	Akr1e1	ENSMUST00000091848	ENSMUSP00000089459	TRANSLATION	protein_coding	-	CCDS26226.1	1	301	28	8	5.1	171.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045410	Akr1e1	ENSMUST00000220936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045410	Akr1e1	ENSMUST00000110691	ENSMUSP00000106319	TRANSLATION	protein_coding	-	-	1	245	24	7	0	127.5	0	-4,-5	-	-	10.692	MINOR
ENSMUSG00000045410	Akr1e1	ENSMUST00000131982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096099	Vmn1r220	ENSMUST00000226651	ENSMUSP00000154123	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096099	Vmn1r220	ENSMUST00000072385	ENSMUSP00000072222	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096099	Vmn1r220	ENSMUST00000227950	ENSMUSP00000153769	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096099	Vmn1r220	ENSMUST00000227679	ENSMUSP00000154136	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096099	Vmn1r220	ENSMUST00000228854	ENSMUSP00000154302	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096099	Vmn1r220	ENSMUST00000228239	ENSMUSP00000154380	TRANSLATION	protein_coding	-	CCDS26335.1	-	298	0	0	0.5	125.8	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021379	Id4	ENSMUST00000021810	ENSMUSP00000021810	TRANSLATION	protein_coding	-	CCDS26492.1	1	161	0	0.6	6.3	49.8	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005320	Fgfr4	ENSMUST00000005452	ENSMUSP00000005452	TRANSLATION	protein_coding	-	CCDS26540.1	1	799	17	13.23	1.5	430.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005320	Fgfr4	ENSMUST00000162967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005320	Fgfr4	ENSMUST00000162167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021213	Akr1c13	ENSMUST00000021634	ENSMUSP00000021634	TRANSLATION	protein_coding	-	CCDS26220.1	1	323	27	7.75	1.5	205.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021213	Akr1c13	ENSMUST00000140971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021213	Akr1c13	ENSMUST00000128892	ENSMUSP00000122246	TRANSLATION	nonsense_mediated_decay	-	-	5	41	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095029	Gm36079	ENSMUST00000177659	ENSMUSP00000137272	TRANSLATION	protein_coding	-	-	-	190	0	0	0.5	214.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021585	Cast	ENSMUST00000223126	ENSMUSP00000152550	TRANSLATION	protein_coding	-	-	1	674	0	8.4	0.5	389.1	0	-4,-5	-	-	10.824	MINOR
ENSMUSG00000021585	Cast	ENSMUST00000223206	ENSMUSP00000152174	TRANSLATION	protein_coding	-	-	5	788	0	8.9	0.5	390.8	0	-4,-2	-	-	11.928	ALTERNATIVE:2
ENSMUSG00000021585	Cast	ENSMUST00000220738	ENSMUSP00000152504	TRANSLATION	protein_coding	-	-	1	445	0	4.9	0.5	287.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021585	Cast	ENSMUST00000222588	ENSMUSP00000152306	TRANSLATION	protein_coding	-	-	1	686	0	8.9	0.5	392	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021585	Cast	ENSMUST00000221208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021585	Cast	ENSMUST00000221873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021585	Cast	ENSMUST00000222373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021585	Cast	ENSMUST00000223309	ENSMUSP00000152657	TRANSLATION	protein_coding	-	-	1	431	0	4.9	0.5	286.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021585	Cast	ENSMUST00000231578	ENSMUSP00000155983	TRANSLATION	protein_coding	stop	-	-	520	0	5.4	0	201.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021585	Cast	ENSMUST00000223123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021585	Cast	ENSMUST00000065629	ENSMUSP00000065275	TRANSLATION	protein_coding	-	CCDS26648.1	1	754	0	8.9	0.5	390.8	0	-4,-5	-	-	11.928	PRINCIPAL:2
ENSMUSG00000021585	Cast	ENSMUST00000223033	ENSMUSP00000152118	TRANSLATION	protein_coding	-	-	1	704	0	8.9	0.5	391.9	0	-4,-5	-	-	11.994	ALTERNATIVE:2
ENSMUSG00000021585	Cast	ENSMUST00000220868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035958	Tdp2	ENSMUST00000223804	ENSMUSP00000153306	TRANSLATION	protein_coding	-	-	-	94	0	0.2	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035958	Tdp2	ENSMUST00000038039	ENSMUSP00000035660	TRANSLATION	protein_coding	-	CCDS26381.1	1	370	8	5.23	0.5	29.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035958	Tdp2	ENSMUST00000226055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035958	Tdp2	ENSMUST00000130788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035958	Tdp2	ENSMUST00000225138	ENSMUSP00000153301	TRANSLATION	nonsense_mediated_decay	-	-	-	94	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035958	Tdp2	ENSMUST00000224542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035958	Tdp2	ENSMUST00000225490	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055254	Ntrk2	ENSMUST00000225583	ENSMUSP00000153337	TRANSLATION	protein_coding	-	-	-	466	0	6.88	0	167.5	1	4,-1	-	-	0	MINOR
ENSMUSG00000055254	Ntrk2	ENSMUST00000224402	ENSMUSP00000153333	TRANSLATION	protein_coding	-	-	-	492	0	6.88	0.5	167.5	1	4,-1	-	-	0	MINOR
ENSMUSG00000055254	Ntrk2	ENSMUST00000225119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055254	Ntrk2	ENSMUST00000079828	ENSMUSP00000078757	TRANSLATION	protein_coding	-	CCDS26573.1	1	821	18	12.06	7.5	489.8	1	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000055254	Ntrk2	ENSMUST00000224259	ENSMUSP00000153270	TRANSLATION	protein_coding	-	CCDS36685.1	-	476	0	6.88	7.5	167.5	1	4,-1	-	-	3	MINOR
ENSMUSG00000055254	Ntrk2	ENSMUST00000109838	ENSMUSP00000105464	TRANSLATION	protein_coding	-	CCDS36685.1	1	476	0	6.88	7.5	167.5	1	4,-1	-	-	3	MINOR
ENSMUSG00000055254	Ntrk2	ENSMUST00000225488	ENSMUSP00000153553	TRANSLATION	protein_coding	-	CCDS26573.1	-	821	18	12.06	7.5	489.8	1	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000055254	Ntrk2	ENSMUST00000226021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055254	Ntrk2	ENSMUST00000223636	ENSMUSP00000152907	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055254	Ntrk2	ENSMUST00000225950	ENSMUSP00000153152	TRANSLATION	protein_coding	-	-	-	489	0	6.88	0	167.5	1	4,-1	-	-	0	MINOR
ENSMUSG00000052180	Serpinb6c	ENSMUST00000172184	ENSMUSP00000127619	TRANSLATION	protein_coding	-	CCDS49227.1	1	379	0	5.8	0.5	430.8	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052180	Serpinb6c	ENSMUST00000110273	ENSMUSP00000105902	TRANSLATION	protein_coding	-	CCDS49227.1	5	379	0	5.8	0.5	430.8	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052180	Serpinb6c	ENSMUST00000222216	ENSMUSP00000152676	TRANSLATION	protein_coding	stop	-	2	194	0	3.8	0	212.5	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000025870	Arl10	ENSMUST00000026988	ENSMUSP00000026988	TRANSLATION	protein_coding	-	CCDS26530.1	1	243	14	2.37	6.3	124.8	1	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000025870	Arl10	ENSMUST00000156024	ENSMUSP00000116506	TRANSLATION	protein_coding	stop	-	2	202	11	2.05	0	103.3	1	0,-3	-	-	-1	MINOR
ENSMUSG00000025870	Arl10	ENSMUST00000135354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025870	Arl10	ENSMUST00000142246	ENSMUSP00000114680	TRANSLATION	protein_coding	start	-	3	54	0	0.8	0	45.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071478	H2ac7	ENSMUST00000090776	ENSMUSP00000088281	TRANSLATION	protein_coding	-	CCDS26351.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025873	Faf2	ENSMUST00000135232	ENSMUSP00000123026	TRANSLATION	protein_coding	stop	-	3	132	0	1.25	0	22.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000025873	Faf2	ENSMUST00000141915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025873	Faf2	ENSMUST00000126071	ENSMUSP00000121182	TRANSLATION	protein_coding	-	CCDS36668.1	1	445	0	5.489	15.3	61.5	2	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025873	Faf2	ENSMUST00000137413	ENSMUSP00000116612	TRANSLATION	protein_coding	stop	-	5	76	0	1.25	0	22.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000025873	Faf2	ENSMUST00000153894	ENSMUSP00000120594	TRANSLATION	nonsense_mediated_decay	start	-	5	69	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000025873	Faf2	ENSMUST00000220453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025873	Faf2	ENSMUST00000135015	ENSMUSP00000117945	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025873	Faf2	ENSMUST00000026991	ENSMUSP00000026991	TRANSLATION	protein_coding	-	-	1	426	0	5.489	0	61.5	2	-4,-5	-	-	12	MINOR
ENSMUSG00000025873	Faf2	ENSMUST00000124752	ENSMUSP00000121606	TRANSLATION	protein_coding	stop	-	5	263	0	2.939	0	22.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062342	Serpinb9e	ENSMUST00000071873	ENSMUSP00000071769	TRANSLATION	protein_coding	-	CCDS26435.1	1	377	0	5.8	0.5	418.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021428	Riok1	ENSMUST00000224956	ENSMUSP00000152922	TRANSLATION	protein_coding	start/stop	-	-	206	9	3.792	0	73.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021428	Riok1	ENSMUST00000225816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000226006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000224477	ENSMUSP00000153030	TRANSLATION	nonsense_mediated_decay	-	-	-	152	0	0.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021428	Riok1	ENSMUST00000225174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000021866	ENSMUSP00000021866	TRANSLATION	protein_coding	-	CCDS26461.1	1	567	20	10.192	1.5	254.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021428	Riok1	ENSMUST00000225418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000223656	ENSMUSP00000153494	TRANSLATION	nonsense_mediated_decay	-	-	-	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021428	Riok1	ENSMUST00000224683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000224962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000225954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021428	Riok1	ENSMUST00000226056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000223910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021428	Riok1	ENSMUST00000226110	ENSMUSP00000153217	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062248	Cks2	ENSMUST00000075853	ENSMUSP00000075250	TRANSLATION	protein_coding	-	CCDS36664.1	1	79	0	2.25	21.5	127.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021368	Tbc1d7	ENSMUST00000223076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021368	Tbc1d7	ENSMUST00000179852	ENSMUSP00000137280	TRANSLATION	protein_coding	-	CCDS26476.1	1	293	0	7.99	14.8	36.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021368	Tbc1d7	ENSMUST00000222160	ENSMUSP00000152208	TRANSLATION	protein_coding	stop	-	5	242	0	6.41	0	31.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000021797	ENSMUSP00000021797	TRANSLATION	protein_coding	-	CCDS26476.1	1	293	0	7.99	14.8	36.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021368	Tbc1d7	ENSMUST00000220787	ENSMUSP00000152358	TRANSLATION	protein_coding	-	-	1	255	0	6.74	0.5	28.4	0	-4,-5	-	-	8.178	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000220579	ENSMUSP00000152072	TRANSLATION	protein_coding	start	-	5	74	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000223000	ENSMUSP00000152737	TRANSLATION	protein_coding	start	-	3	192	0	3.75	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000221352	ENSMUSP00000152443	TRANSLATION	nonsense_mediated_decay	-	-	5	74	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000221795	ENSMUSP00000152162	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021368	Tbc1d7	ENSMUST00000221095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058331	Zfp85	ENSMUST00000144183	ENSMUSP00000121202	TRANSLATION	protein_coding	-	CCDS36717.1	1	473	56	1.9	0.5	357.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058331	Zfp85	ENSMUST00000091520	ENSMUSP00000089105	TRANSLATION	nonsense_mediated_decay	-	-	2	48	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052293	Taf9	ENSMUST00000187792	ENSMUSP00000140051	TRANSLATION	protein_coding	stop	-	2	170	0	0.6	0	173.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052293	Taf9	ENSMUST00000190594	ENSMUSP00000140244	TRANSLATION	protein_coding	-	CCDS26735.1	1	264	0	0.6	0.5	173.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052293	Taf9	ENSMUST00000185767	ENSMUSP00000140423	TRANSLATION	protein_coding	stop	-	2	155	0	0.6	0	173.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052293	Taf9	ENSMUST00000190165	ENSMUSP00000139407	TRANSLATION	protein_coding	stop	-	2	181	0	0.6	0	173.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052293	Taf9	ENSMUST00000167256	ENSMUSP00000132143	TRANSLATION	protein_coding	-	CCDS26735.1	2	264	0	0.6	0.5	173.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038732	Mboat1	ENSMUST00000047311	ENSMUSP00000045441	TRANSLATION	protein_coding	-	CCDS26414.1	1	492	0	0	3.9	93.5	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000038732	Mboat1	ENSMUST00000153269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038732	Mboat1	ENSMUST00000222095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038732	Mboat1	ENSMUST00000152798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038732	Mboat1	ENSMUST00000220870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038651	Sycp2l	ENSMUST00000124093	ENSMUSP00000115127	TRANSLATION	protein_coding	-	-	5	842	0	7.738	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038651	Sycp2l	ENSMUST00000141292	ENSMUSP00000121296	TRANSLATION	protein_coding	start/stop	-	3	253	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038651	Sycp2l	ENSMUST00000145810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035762	Tmem161b	ENSMUST00000057495	ENSMUSP00000055208	TRANSLATION	protein_coding	-	CCDS36739.1	1	487	0	0	8.3	699.5	11	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000035762	Tmem161b	ENSMUST00000225126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035762	Tmem161b	ENSMUST00000223827	ENSMUSP00000153673	TRANSLATION	nonsense_mediated_decay	-	-	-	267	0	0	0	394.3	6	0,-3	-	-	-1	MINOR
ENSMUSG00000035762	Tmem161b	ENSMUST00000223862	ENSMUSP00000153435	TRANSLATION	nonsense_mediated_decay	-	-	-	222	0	0	0	297.2	4	0,-3	-	-	-1	MINOR
ENSMUSG00000035762	Tmem161b	ENSMUST00000225069	ENSMUSP00000152891	TRANSLATION	protein_coding	-	-	-	305	0	0	6.5	415.2	7	-4,-7	-	-	2.259	MINOR
ENSMUSG00000035762	Tmem161b	ENSMUST00000224501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035762	Tmem161b	ENSMUST00000224525	ENSMUSP00000152993	TRANSLATION	protein_coding	stop	-	-	23	0	0	0	28.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035762	Tmem161b	ENSMUST00000225708	ENSMUSP00000152964	TRANSLATION	nonsense_mediated_decay	start	-	-	139	0	0	0	194	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035762	Tmem161b	ENSMUST00000225212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076755	Trgv1	ENSMUST00000103564	ENSMUSP00000100342	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	54.6	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000021590	Spata9	ENSMUST00000223744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021590	Spata9	ENSMUST00000022081	ENSMUSP00000022081	TRANSLATION	protein_coding	-	CCDS26653.1	1	252	0	0	7.5	453.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021590	Spata9	ENSMUST00000225553	ENSMUSP00000153343	TRANSLATION	protein_coding	stop	-	-	103	0	0	0	171.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033781	Asb13	ENSMUST00000042288	ENSMUSP00000046476	TRANSLATION	protein_coding	-	CCDS36582.1	1	278	0	4.81	6.4	153.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000033781	Asb13	ENSMUST00000141967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033781	Asb13	ENSMUST00000141147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033781	Asb13	ENSMUST00000156595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017064	Prl5a1	ENSMUST00000017208	ENSMUSP00000017208	TRANSLATION	protein_coding	-	CCDS26410.1	1	230	0	2.68	0.5	162.8	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000060024	Vmn1r213	ENSMUST00000076897	ENSMUSP00000076163	TRANSLATION	protein_coding	-	CCDS26328.1	-	384	0	0	0.5	103	5	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000060024	Vmn1r213	ENSMUST00000228758	ENSMUSP00000153766	TRANSLATION	protein_coding	-	CCDS26328.1	-	384	0	0	0.5	103	5	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000060024	Vmn1r213	ENSMUST00000228031	ENSMUSP00000154625	TRANSLATION	protein_coding	-	-	-	298	0	0	0	103	5	-1,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000060024	Vmn1r213	ENSMUST00000227573	ENSMUSP00000153732	TRANSLATION	protein_coding	-	-	-	298	0	0	0	103	5	-1,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091347	Gm10772	ENSMUST00000167981	ENSMUSP00000126511	TRANSLATION	protein_coding	start/stop	-	-	85	12	1	0	60	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000059288	Cdyl	ENSMUST00000226071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059288	Cdyl	ENSMUST00000075220	ENSMUSP00000074707	TRANSLATION	protein_coding	-	CCDS49235.1	1	593	0	5.4	1.5	178.3	0	-4,-5	-	-	11.466	MINOR
ENSMUSG00000059288	Cdyl	ENSMUST00000225602	ENSMUSP00000153274	TRANSLATION	nonsense_mediated_decay	-	-	-	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059288	Cdyl	ENSMUST00000163595	ENSMUSP00000131784	TRANSLATION	protein_coding	-	CCDS49236.1	1	544	0	5.73	8.6	179.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000225186	ENSMUSP00000153079	TRANSLATION	protein_coding	-	CCDS49373.1	-	639	0	0	1.5	310.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000224312	ENSMUSP00000153150	TRANSLATION	protein_coding	-	CCDS49373.1	-	639	0	0	1.5	310.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000224081	ENSMUSP00000153273	TRANSLATION	protein_coding	stop	-	-	200	0	0	0	197	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000225726	ENSMUSP00000153338	TRANSLATION	nonsense_mediated_decay	-	-	-	390	0	0	0	197	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000026519	ENSMUSP00000026519	TRANSLATION	protein_coding	-	CCDS49373.1	1	639	0	0	1.5	310.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062822	4833420G17Rik	ENSMUST00000225292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046932	Vmn1r193	ENSMUST00000057516	ENSMUSP00000058480	TRANSLATION	protein_coding	-	CCDS26312.1	-	319	0	0	0.5	119.2	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046932	Vmn1r193	ENSMUST00000228303	ENSMUSP00000154019	TRANSLATION	protein_coding	-	CCDS26312.1	-	319	0	0	0.5	119.2	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046932	Vmn1r193	ENSMUST00000227562	ENSMUSP00000154007	TRANSLATION	protein_coding	-	CCDS26312.1	-	319	0	0	0.5	119.2	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046932	Vmn1r193	ENSMUST00000227457	ENSMUSP00000154364	TRANSLATION	protein_coding	-	CCDS26312.1	-	319	0	0	0.5	119.2	4	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021148	Gm9745	ENSMUST00000187196	ENSMUSP00000139705	TRANSLATION	protein_coding	-	-	1	227	13	4	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021148	Gm9745	ENSMUST00000021573	ENSMUSP00000021573	TRANSLATION	protein_coding	-	-	5	227	13	4	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021565	Slc6a19	ENSMUST00000140878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021565	Slc6a19	ENSMUST00000022048	ENSMUSP00000022048	TRANSLATION	protein_coding	-	CCDS26634.1	1	634	10	6.91	9.5	593.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021565	Slc6a19	ENSMUST00000120322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021565	Slc6a19	ENSMUST00000123997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021565	Slc6a19	ENSMUST00000139087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021565	Slc6a19	ENSMUST00000132085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021565	Slc6a19	ENSMUST00000124406	ENSMUSP00000119313	TRANSLATION	nonsense_mediated_decay	-	-	3	83	5	0.6	0	58.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079941	Cox5b-ps	ENSMUST00000044043	ENSMUSP00000038961	TRANSLATION	protein_coding	-	-	-	129	4	1	9.6	131.5	0	-2,2	-	-	19	PRINCIPAL:1
ENSMUSG00000078139	AK157302	ENSMUST00000104942	ENSMUSP00000100547	TRANSLATION	protein_coding	-	-	-	129	4	0.8	20.3	0	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000044934	Zfp367	ENSMUST00000059817	ENSMUSP00000050854	TRANSLATION	protein_coding	-	CCDS26596.1	1	340	11	1.88	1.5	51.8	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000044934	Zfp367	ENSMUST00000134136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044934	Zfp367	ENSMUST00000152644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044934	Zfp367	ENSMUST00000117241	ENSMUSP00000113331	TRANSLATION	protein_coding	-	-	1	267	11	1.88	0	51.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000017778	Cox7c	ENSMUST00000132233	ENSMUSP00000117385	TRANSLATION	protein_coding	-	-	2	49	0	1.25	0	59.7	1	-3,-6	-	-	7.794	MINOR
ENSMUSG00000017778	Cox7c	ENSMUST00000017922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017778	Cox7c	ENSMUST00000131011	ENSMUSP00000115419	TRANSLATION	protein_coding	-	CCDS26668.1	1	63	0	2	21.5	88.6	1	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000017778	Cox7c	ENSMUST00000078764	ENSMUSP00000119276	TRANSLATION	protein_coding	-	-	2	24	0	0.75	0	33.9	0	-4,-7	-	-	4.548	MINOR
ENSMUSG00000042743	Sgtb	ENSMUST00000160322	ENSMUSP00000125569	TRANSLATION	protein_coding	stop	-	3	176	0	4.964	0	120.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042743	Sgtb	ENSMUST00000044385	ENSMUSP00000041307	TRANSLATION	protein_coding	-	CCDS26746.1	1	304	0	6.284	9.5	157.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042743	Sgtb	ENSMUST00000159574	ENSMUSP00000124895	TRANSLATION	protein_coding	stop	-	5	244	0	4.36	0	97.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021319	Sfrp4	ENSMUST00000002883	ENSMUSP00000002883	TRANSLATION	protein_coding	-	CCDS26261.1	1	351	0	1.75	6.3	155.5	0	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021319	Sfrp4	ENSMUST00000222992	ENSMUSP00000152850	TRANSLATION	protein_coding	-	-	5	193	0	0	0	54.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021319	Sfrp4	ENSMUST00000221810	ENSMUSP00000152511	TRANSLATION	protein_coding	start	-	5	202	0	0.75	0	52.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021319	Sfrp4	ENSMUST00000222464	ENSMUSP00000152498	TRANSLATION	protein_coding	-	-	1	365	0	1.75	0	153.5	0	4,-2	-	-	11.88	MINOR
ENSMUSG00000042590	Ipo11	ENSMUST00000186033	ENSMUSP00000140046	TRANSLATION	protein_coding	-	-	5	984	0	4.7	1.5	66.1	0	-3,-6	-	-	12.168	MINOR
ENSMUSG00000042590	Ipo11	ENSMUST00000186005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042590	Ipo11	ENSMUST00000190794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042590	Ipo11	ENSMUST00000185993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042590	Ipo11	ENSMUST00000080856	ENSMUSP00000079667	TRANSLATION	protein_coding	-	CCDS36776.1	1	975	0	4.7	12.8	66.1	0	-3,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000042590	Ipo11	ENSMUST00000190801	ENSMUSP00000140839	TRANSLATION	nonsense_mediated_decay	start	-	5	88	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042590	Ipo11	ENSMUST00000191312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021598	Med10	ENSMUST00000222387	ENSMUSP00000152879	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	78.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021598	Med10	ENSMUST00000221045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021598	Med10	ENSMUST00000223376	ENSMUSP00000152842	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	100.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021598	Med10	ENSMUST00000221893	ENSMUSP00000152144	TRANSLATION	protein_coding	-	-	2	154	0	0	0	101	0	-4,-5	-	-	4.476	MINOR
ENSMUSG00000021598	Med10	ENSMUST00000220649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021598	Med10	ENSMUST00000022089	ENSMUSP00000022089	TRANSLATION	protein_coding	-	CCDS26625.1	1	135	0	0	18.3	126.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000075031	H2bc3	ENSMUST00000099703	ENSMUSP00000097294	TRANSLATION	protein_coding	-	CCDS26363.1	-	126	0	1	8.8	91	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021697	Depdc1b	ENSMUST00000168037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021697	Depdc1b	ENSMUST00000172402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021697	Depdc1b	ENSMUST00000051594	ENSMUSP00000059291	TRANSLATION	protein_coding	-	CCDS26762.1	1	529	0	2.6	5.2	96	0	-4,-2	-	-	14	PRINCIPAL:2
ENSMUSG00000021697	Depdc1b	ENSMUST00000171178	ENSMUSP00000132972	TRANSLATION	protein_coding	-	-	5	467	0	2.6	4.4	96	0	-4,-2	-	-	13.62	ALTERNATIVE:2
ENSMUSG00000021697	Depdc1b	ENSMUST00000163307	ENSMUSP00000131707	TRANSLATION	nonsense_mediated_decay	-	-	1	529	0	2.6	5.2	96	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021697	Depdc1b	ENSMUST00000167413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036721	Zscan12	ENSMUST00000099720	ENSMUSP00000097308	TRANSLATION	protein_coding	-	CCDS26273.1	1	501	28	1.6	0.5	263.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036721	Zscan12	ENSMUST00000053293	ENSMUSP00000058904	TRANSLATION	protein_coding	-	CCDS26273.1	1	501	28	1.6	0.5	263.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036721	Zscan12	ENSMUST00000225545	ENSMUSP00000153548	TRANSLATION	protein_coding	-	CCDS26273.1	-	501	28	1.6	0.5	263.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000003992	Ssbp2	ENSMUST00000042122	ENSMUSP00000037115	TRANSLATION	protein_coding	-	CCDS26676.1	1	331	0	0	10.6	216.3	0	-4,-7	-	-	9.166	ALTERNATIVE:1
ENSMUSG00000003992	Ssbp2	ENSMUST00000137658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003992	Ssbp2	ENSMUST00000137493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003992	Ssbp2	ENSMUST00000231481	ENSMUSP00000156076	TRANSLATION	protein_coding	stop	-	-	244	0	0	0	93.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003992	Ssbp2	ENSMUST00000004094	ENSMUSP00000004094	TRANSLATION	protein_coding	-	CCDS26677.1	1	361	0	0	12.8	217.8	0	-4,-7	-	-	10	PRINCIPAL:4
ENSMUSG00000003992	Ssbp2	ENSMUST00000156547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003992	Ssbp2	ENSMUST00000141381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003992	Ssbp2	ENSMUST00000144659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003992	Ssbp2	ENSMUST00000133984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003992	Ssbp2	ENSMUST00000138488	ENSMUSP00000115548	TRANSLATION	nonsense_mediated_decay	-	-	3	49	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034152	Exoc3	ENSMUST00000035934	ENSMUSP00000039416	TRANSLATION	protein_coding	-	CCDS26640.1	1	755	0	5.26	1.5	536.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034152	Exoc3	ENSMUST00000220548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034152	Exoc3	ENSMUST00000222213	ENSMUSP00000152783	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034152	Exoc3	ENSMUST00000222248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034152	Exoc3	ENSMUST00000223045	ENSMUSP00000152217	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034152	Exoc3	ENSMUST00000220679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006179	Prss16	ENSMUST00000150547	ENSMUSP00000152943	TRANSLATION	protein_coding	-	-	3	169	0	1.7	0	181.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000006179	Prss16	ENSMUST00000129665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006179	Prss16	ENSMUST00000130585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006179	Prss16	ENSMUST00000006341	ENSMUSP00000006341	TRANSLATION	protein_coding	-	CCDS26303.1	1	509	0	5.52	0.5	512.3	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000006179	Prss16	ENSMUST00000223857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021384	Susd3	ENSMUST00000135784	ENSMUSP00000115888	TRANSLATION	protein_coding	stop	-	3	139	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000021384	Susd3	ENSMUST00000119721	ENSMUSP00000113631	TRANSLATION	protein_coding	-	-	1	170	0	0.84	0	27.6	2	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021384	Susd3	ENSMUST00000141408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021384	Susd3	ENSMUST00000021816	ENSMUSP00000021816	TRANSLATION	protein_coding	-	CCDS56880.1	1	257	0	0.64	0.5	27.6	2	-2,0	-	-	10.572	MINOR
ENSMUSG00000021384	Susd3	ENSMUST00000131880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021384	Susd3	ENSMUST00000058196	ENSMUSP00000061423	TRANSLATION	protein_coding	-	CCDS26498.1	1	269	0	0.84	1.5	27.6	2	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000021367	Edn1	ENSMUST00000021796	ENSMUSP00000021796	TRANSLATION	protein_coding	-	CCDS26474.1	1	202	0	0	1.5	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000074886	Grk6	ENSMUST00000224118	ENSMUSP00000152968	TRANSLATION	protein_coding	-	-	-	576	22	15	3.9	298.4	0	-4,-5	-	-	19.094	ALTERNATIVE:2
ENSMUSG00000074886	Grk6	ENSMUST00000001115	ENSMUSP00000001115	TRANSLATION	protein_coding	-	CCDS49272.1	1	589	22	14.9	2.7	298.4	0	-4,-5	-	-	18.444	ALTERNATIVE:2
ENSMUSG00000074886	Grk6	ENSMUST00000224653	ENSMUSP00000153623	TRANSLATION	protein_coding	-	-	-	557	22	13.9	3.9	298.4	0	-4,-5	-	-	16.892	MINOR
ENSMUSG00000074886	Grk6	ENSMUST00000224532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074886	Grk6	ENSMUST00000099482	ENSMUSP00000097081	TRANSLATION	protein_coding	-	CCDS36676.1	1	560	22	14.5	6.3	298.4	0	-4,-5	-	-	18.998	PRINCIPAL:3
ENSMUSG00000074886	Grk6	ENSMUST00000225925	ENSMUSP00000153668	TRANSLATION	protein_coding	-	-	-	542	16	14	0.5	254.5	0	-4,-5	-	-	9.366	MINOR
ENSMUSG00000074886	Grk6	ENSMUST00000224995	ENSMUSP00000153344	TRANSLATION	protein_coding	-	-	-	584	21	14.9	0.5	285.6	0	-4,-5	-	-	16.368	MINOR
ENSMUSG00000036211	H1f6	ENSMUST00000041052	ENSMUSP00000037304	TRANSLATION	protein_coding	-	CCDS26358.1	-	209	0	0.6	1.5	75.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038246	Fam50b	ENSMUST00000221037	ENSMUSP00000152187	TRANSLATION	protein_coding	-	CCDS49232.1	1	334	0	0	1.7	282.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038246	Fam50b	ENSMUST00000039605	ENSMUSP00000046980	TRANSLATION	protein_coding	-	CCDS49232.1	1	334	0	0	1.7	282.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000055137	Sugct	ENSMUST00000220514	ENSMUSP00000152307	TRANSLATION	protein_coding	-	-	1	47	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000055137	Sugct	ENSMUST00000221138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055137	Sugct	ENSMUST00000221598	ENSMUSP00000152375	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000055137	Sugct	ENSMUST00000221467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055137	Sugct	ENSMUST00000068545	ENSMUSP00000070759	TRANSLATION	protein_coding	-	CCDS26252.1	1	436	22	9.99	1.5	0	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000021496	Pcbd2	ENSMUST00000021958	ENSMUSP00000021958	TRANSLATION	protein_coding	-	CCDS26554.1	1	136	8	2.75	0.5	111.1	0	-2,2	-	-	18	MINOR
ENSMUSG00000021496	Pcbd2	ENSMUST00000124968	ENSMUSP00000115392	TRANSLATION	protein_coding	-	-	1	103	8	2.75	18.3	111.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000041685	Fcho2	ENSMUST00000109403	ENSMUSP00000105030	TRANSLATION	protein_coding	stop	-	5	394	0	7.88	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041685	Fcho2	ENSMUST00000040340	ENSMUSP00000042959	TRANSLATION	protein_coding	-	CCDS56897.1	1	809	0	13.96	4.2	297.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000041685	Fcho2	ENSMUST00000224992	ENSMUSP00000153477	TRANSLATION	protein_coding	-	-	-	395	0	7.88	0	68.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041685	Fcho2	ENSMUST00000179563	ENSMUSP00000137422	TRANSLATION	protein_coding	-	-	5	414	0	7.88	0	68.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041685	Fcho2	ENSMUST00000225945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041685	Fcho2	ENSMUST00000224231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041685	Fcho2	ENSMUST00000224416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041685	Fcho2	ENSMUST00000223634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041685	Fcho2	ENSMUST00000225318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041685	Fcho2	ENSMUST00000225840	ENSMUSP00000153040	TRANSLATION	protein_coding	stop	-	-	281	0	7.58	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041685	Fcho2	ENSMUST00000225094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041685	Fcho2	ENSMUST00000099277	ENSMUSP00000096883	TRANSLATION	nonsense_mediated_decay	-	-	5	356	0	7.88	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034987	Hrh2	ENSMUST00000211742	ENSMUSP00000147413	TRANSLATION	nonsense_mediated_decay	-	-	5	371	0	0.8	0.5	231.3	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000034987	Hrh2	ENSMUST00000038101	ENSMUSP00000038170	TRANSLATION	protein_coding	-	CCDS26526.1	1	397	0	0.8	0.5	231.3	8	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000034987	Hrh2	ENSMUST00000209846	ENSMUSP00000148117	TRANSLATION	protein_coding	-	-	5	421	0	0.8	1.2	231.3	8	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000050345	4930486L24Rik	ENSMUST00000091569	ENSMUSP00000089157	TRANSLATION	protein_coding	-	CCDS26583.1	1	333	3	6.6	1.5	308.7	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000021396	Nxnl2	ENSMUST00000221339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021396	Nxnl2	ENSMUST00000021828	ENSMUSP00000021828	TRANSLATION	protein_coding	-	CCDS26511.1	1	156	0	1.6	13.6	96.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000069270	H2ac6	ENSMUST00000171127	ENSMUSP00000127684	TRANSLATION	protein_coding	-	CCDS26356.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000063905	Gm10139	ENSMUST00000081471	ENSMUSP00000080191	TRANSLATION	protein_coding	start/stop	-	-	57	8	1	0	47	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036376	Abt1	ENSMUST00000041782	ENSMUSP00000045888	TRANSLATION	protein_coding	-	CCDS26338.1	1	269	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042385	Gzmk	ENSMUST00000038212	ENSMUSP00000044512	TRANSLATION	protein_coding	-	CCDS26783.1	1	263	7	4.5	4.1	231.3	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000042385	Gzmk	ENSMUST00000140324	ENSMUSP00000114250	TRANSLATION	nonsense_mediated_decay	-	-	5	69	3	1.5	0	63.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000042385	Gzmk	ENSMUST00000122399	ENSMUSP00000113530	TRANSLATION	protein_coding	-	-	1	224	7	4	0	211.9	0	-4,-7	-	-	15.834	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000161201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000138640	ENSMUSP00000158964	TRANSLATION	nonsense_mediated_decay	-	-	5	124	0	2.25	0	68.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000150620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000066928	ENSMUSP00000066663	TRANSLATION	protein_coding	-	-	1	573	0	4.2	0	126.5	0	-2,0	-	-	12	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000239286	ENSMUSP00000159214	TRANSLATION	protein_coding	stop	-	-	205	2	0.95	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000136951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000140651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000148891	ENSMUSP00000115228	TRANSLATION	protein_coding	-	CCDS49251.1	1	642	0	4.2	0.5	126.5	0	-2,0	-	-	12	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000132050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054728	Phactr1	ENSMUST00000131942	ENSMUSP00000123346	TRANSLATION	protein_coding	-	CCDS79182.1	1	557	0	4.2	6.5	126.5	0	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000054728	Phactr1	ENSMUST00000149235	ENSMUSP00000115207	TRANSLATION	protein_coding	-	CCDS79181.1	5	580	0	4.2	6.3	126.5	0	-4,-5	-	-	13.928	ALTERNATIVE:1
ENSMUSG00000054728	Phactr1	ENSMUST00000137434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000123987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000128646	ENSMUSP00000122232	TRANSLATION	protein_coding	-	CCDS79181.1	1	580	0	4.2	6.3	126.5	0	-4,-5	-	-	13.928	PRINCIPAL:4
ENSMUSG00000054728	Phactr1	ENSMUST00000136576	ENSMUSP00000158985	TRANSLATION	protein_coding	-	-	1	128	0	2.25	0	68.9	0	-4,-2	-	-	4.644	MINOR
ENSMUSG00000054728	Phactr1	ENSMUST00000127859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054728	Phactr1	ENSMUST00000110161	ENSMUSP00000105790	TRANSLATION	protein_coding	-	-	5	649	0	4.2	5.3	126.5	0	-4,-5	-	-	13.564	ALTERNATIVE:1
ENSMUSG00000021712	Trim23	ENSMUST00000069187	ENSMUSP00000070767	TRANSLATION	protein_coding	-	-	1	513	23	4	0	296.6	0	-4,-7	-	-	18	MINOR
ENSMUSG00000021712	Trim23	ENSMUST00000069174	ENSMUSP00000069371	TRANSLATION	protein_coding	-	-	1	554	23	4	0.5	296.6	0	-4,-7	-	-	18	MINOR
ENSMUSG00000021712	Trim23	ENSMUST00000022225	ENSMUSP00000022225	TRANSLATION	protein_coding	-	-	1	574	23	4	12.5	296.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000051029	Serpinb1b	ENSMUST00000016951	ENSMUSP00000016951	TRANSLATION	protein_coding	-	CCDS26433.1	1	382	0	6	0.5	436.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051029	Serpinb1b	ENSMUST00000222973	ENSMUSP00000152793	TRANSLATION	protein_coding	stop	-	5	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005891	Prl4a1	ENSMUST00000021779	ENSMUSP00000021779	TRANSLATION	protein_coding	-	CCDS26409.1	1	227	0	3	1.5	232.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021346	Prl8a8	ENSMUST00000110350	ENSMUSP00000105979	TRANSLATION	protein_coding	-	CCDS79173.1	1	241	0	2.6	1.5	183.1	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021346	Prl8a8	ENSMUST00000018389	ENSMUSP00000018389	TRANSLATION	protein_coding	-	CCDS26399.1	1	240	0	2.6	1.5	183.1	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000021346	Prl8a8	ENSMUST00000223621	ENSMUSP00000153520	TRANSLATION	protein_coding	stop	-	-	217	0	1.8	0	115	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021346	Prl8a8	ENSMUST00000224072	ENSMUSP00000153131	TRANSLATION	protein_coding	-	-	-	278	0	2.6	0	183.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000021468	Sptlc1	ENSMUST00000221709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021468	Sptlc1	ENSMUST00000021920	ENSMUSP00000021920	TRANSLATION	protein_coding	-	CCDS26521.1	1	473	3	7.945	11.7	142.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021468	Sptlc1	ENSMUST00000221265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093668	Pou5f2	ENSMUST00000175955	ENSMUSP00000135597	TRANSLATION	protein_coding	-	CCDS56895.1	-	329	0	0.6	0.5	145.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021592	Arsk	ENSMUST00000224884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021592	Arsk	ENSMUST00000225642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021592	Arsk	ENSMUST00000239063	ENSMUSP00000158928	TRANSLATION	protein_coding	-	-	-	553	3	4.07	0.5	160.2	0	3,-3	-	-	15	ALTERNATIVE:2
ENSMUSG00000021592	Arsk	ENSMUST00000120573	ENSMUSP00000113274	TRANSLATION	protein_coding	-	CCDS49315.1	1	556	3	4.07	0.5	160.2	0	4,-1	-	-	15	PRINCIPAL:2
ENSMUSG00000021592	Arsk	ENSMUST00000223579	ENSMUSP00000153634	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0.4	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000021592	Arsk	ENSMUST00000224262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021592	Arsk	ENSMUST00000224632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021732	Fgf10	ENSMUST00000128103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021732	Fgf10	ENSMUST00000146674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021732	Fgf10	ENSMUST00000022246	ENSMUSP00000022246	TRANSLATION	protein_coding	-	CCDS26795.1	1	209	0	2.8	4.1	163.8	0	1,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000064063	BC048507	ENSMUST00000078471	ENSMUSP00000077564	TRANSLATION	protein_coding	-	CCDS36718.1	-	89	0	1	21.5	139.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021156	Zmynd11	ENSMUST00000137932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000137813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000110635	ENSMUSP00000106265	TRANSLATION	protein_coding	-	-	5	571	15	9.57	0	69.1	0	-4,-2	-	-	14.97	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000220996	ENSMUSP00000152774	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000223421	ENSMUSP00000152352	TRANSLATION	protein_coding	stop	-	5	472	8	7.82	0	77.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000144642	ENSMUSP00000117375	TRANSLATION	protein_coding	stop	-	3	162	8	1.91	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000146039	ENSMUSP00000116299	TRANSLATION	protein_coding	stop	-	3	96	6	1.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000222358	ENSMUSP00000152106	TRANSLATION	protein_coding	-	-	5	59	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000128658	ENSMUSP00000121574	TRANSLATION	protein_coding	stop	-	3	149	0	1.83	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000110637	ENSMUSP00000106267	TRANSLATION	protein_coding	-	CCDS36590.1	5	548	8	9.16	11.5	83.5	0	-4,-2	-	-	13.556	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000222475	ENSMUSP00000152716	TRANSLATION	protein_coding	stop	-	5	516	7	8.16	1.2	69.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000062658	ENSMUSP00000059767	TRANSLATION	protein_coding	-	CCDS36590.1	1	548	8	9.16	11.5	83.5	0	-4,-2	-	-	13.556	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000140180	ENSMUSP00000152332	TRANSLATION	nonsense_mediated_decay	start	-	5	155	8	1.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000222927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000154994	ENSMUSP00000116635	TRANSLATION	protein_coding	stop	-	5	249	8	4.74	0	42.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000222148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000110633	ENSMUSP00000106263	TRANSLATION	protein_coding	-	-	5	618	15	10.57	0	83.5	0	-4,-7	-	-	18	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000157035	ENSMUSP00000152861	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000110634	ENSMUSP00000106264	TRANSLATION	protein_coding	-	CCDS56870.1	5	602	15	10.57	14.8	83.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021156	Zmynd11	ENSMUST00000222038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000130151	ENSMUSP00000118964	TRANSLATION	protein_coding	stop	-	5	286	8	5.59	0	42.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000110636	ENSMUSP00000106266	TRANSLATION	protein_coding	-	CCDS56870.1	1	602	15	10.57	14.8	83.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021156	Zmynd11	ENSMUST00000138039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021156	Zmynd11	ENSMUST00000146059	ENSMUSP00000122133	TRANSLATION	protein_coding	stop	-	5	89	0	1.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000152725	ENSMUSP00000118002	TRANSLATION	protein_coding	stop	-	2	203	8	3.24	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021156	Zmynd11	ENSMUST00000110638	ENSMUSP00000106268	TRANSLATION	protein_coding	-	CCDS84007.1	5	604	8	9.16	1.5	83.5	0	-4,-2	-	-	10.656	MINOR
ENSMUSG00000006490	Prl8a9	ENSMUST00000006662	ENSMUSP00000006662	TRANSLATION	protein_coding	-	CCDS26400.1	1	241	0	3.22	1.5	173.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000061022	Vmn1r222	ENSMUST00000077116	ENSMUSP00000076365	TRANSLATION	protein_coding	-	CCDS26336.1	-	308	0	0	0.5	129.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061022	Vmn1r222	ENSMUST00000226672	ENSMUSP00000157644	TRANSLATION	protein_coding	-	CCDS26336.1	-	308	0	0	0.5	129.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061022	Vmn1r222	ENSMUST00000235574	ENSMUSP00000157499	TRANSLATION	protein_coding	-	CCDS26336.1	-	308	0	0	0.5	129.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000069309	Hist1h2an	ENSMUST00000091751	ENSMUSP00000089345	TRANSLATION	protein_coding	-	CCDS26297.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021365	Nedd9	ENSMUST00000021794	ENSMUSP00000021794	TRANSLATION	protein_coding	-	CCDS49247.1	1	833	0	3.6	5.1	511.8	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000021365	Nedd9	ENSMUST00000225053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021365	Nedd9	ENSMUST00000225297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021365	Nedd9	ENSMUST00000224083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021365	Nedd9	ENSMUST00000224803	ENSMUSP00000152937	TRANSLATION	protein_coding	stop	-	-	194	0	0.8	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021365	Nedd9	ENSMUST00000163623	ENSMUSP00000125773	TRANSLATION	protein_coding	-	CCDS36640.2	1	833	0	3.6	5.1	511.8	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000034575	Tent4a	ENSMUST00000222497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034575	Tent4a	ENSMUST00000223344	ENSMUSP00000152244	TRANSLATION	protein_coding	-	CCDS26622.1	3	542	17	5.5	7.6	121.1	0	-4,-6	-	-	20.34	PRINCIPAL:1
ENSMUSG00000034575	Tent4a	ENSMUST00000198607	ENSMUSP00000142516	TRANSLATION	protein_coding	-	-	1	785	17	5.83	0.5	121.1	0	-4,-5	-	-	18	MINOR
ENSMUSG00000034575	Tent4a	ENSMUST00000044081	ENSMUSP00000040757	TRANSLATION	protein_coding	-	CCDS26622.1	1	542	17	5.5	7.6	121.1	0	-4,-6	-	-	20.34	PRINCIPAL:1
ENSMUSG00000074634	Tmem267	ENSMUST00000223912	ENSMUSP00000153654	TRANSLATION	protein_coding	-	-	-	238	0	0	1.5	0	2	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074634	Tmem267	ENSMUST00000177361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074634	Tmem267	ENSMUST00000176171	ENSMUSP00000135685	TRANSLATION	protein_coding	-	CCDS56899.1	2	238	0	0	1.5	0	2	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074634	Tmem267	ENSMUST00000099147	ENSMUSP00000096751	TRANSLATION	protein_coding	-	CCDS56899.1	5	238	0	0	1.5	0	2	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000074634	Tmem267	ENSMUST00000178948	ENSMUSP00000137012	TRANSLATION	protein_coding	-	-	1	238	0	0	1.5	0	2	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000021440	Cts7	ENSMUST00000021892	ENSMUSP00000021892	TRANSLATION	protein_coding	-	CCDS26588.1	1	331	4	6.2	1.5	281.7	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000021440	Cts7	ENSMUST00000224773	ENSMUSP00000153003	TRANSLATION	nonsense_mediated_decay	-	-	-	87	0	1.4	0	33.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000021440	Cts7	ENSMUST00000225321	ENSMUSP00000153508	TRANSLATION	protein_coding	-	-	-	302	4	5.2	0	236.4	0	4,-1	-	-	11.284	MINOR
ENSMUSG00000021440	Cts7	ENSMUST00000224986	ENSMUSP00000153603	TRANSLATION	protein_coding	-	CCDS26588.1	-	331	4	6.2	1.5	281.7	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000032621	Srek1	ENSMUST00000210489	ENSMUSP00000147737	TRANSLATION	protein_coding	-	CCDS26743.1	1	494	0	1.68	1.5	51.4	0	-3,-6	-	-	9.954	MINOR
ENSMUSG00000032621	Srek1	ENSMUST00000211491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032621	Srek1	ENSMUST00000210836	ENSMUSP00000147868	TRANSLATION	nonsense_mediated_decay	-	-	1	198	0	1.68	0	51.4	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032621	Srek1	ENSMUST00000210269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032621	Srek1	ENSMUST00000210643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032621	Srek1	ENSMUST00000211030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032621	Srek1	ENSMUST00000211139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032621	Srek1	ENSMUST00000211322	ENSMUSP00000148039	TRANSLATION	protein_coding	stop	-	5	314	0	1.68	0	51.4	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000032621	Srek1	ENSMUST00000209961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032621	Srek1	ENSMUST00000074616	ENSMUSP00000074196	TRANSLATION	protein_coding	-	-	5	610	0	1.68	0.5	78	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021716	Srek1ip1	ENSMUST00000022230	ENSMUSP00000022230	TRANSLATION	protein_coding	-	CCDS26753.1	1	153	4	0	1.5	30.2	0	-4,-5	-	-	9.664	PRINCIPAL:1
ENSMUSG00000021716	Srek1ip1	ENSMUST00000137278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021716	Srek1ip1	ENSMUST00000156105	ENSMUSP00000122592	TRANSLATION	nonsense_mediated_decay	-	-	1	79	4	0	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021716	Srek1ip1	ENSMUST00000147061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021716	Srek1ip1	ENSMUST00000145661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048280	Zfp738	ENSMUST00000125495	ENSMUSP00000135683	TRANSLATION	protein_coding	-	-	1	104	0	1.42	0.5	82.5	0	-4,-5	-	-	2.4	MINOR
ENSMUSG00000048280	Zfp738	ENSMUST00000220552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048280	Zfp738	ENSMUST00000175678	ENSMUSP00000134865	TRANSLATION	protein_coding	-	-	2	114	0	1.42	0.5	82.5	0	-4,-5	-	-	2.4	MINOR
ENSMUSG00000048280	Zfp738	ENSMUST00000175821	ENSMUSP00000135050	TRANSLATION	protein_coding	stop	-	3	191	14	3.22	0	121	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048280	Zfp738	ENSMUST00000137496	ENSMUSP00000121275	TRANSLATION	protein_coding	-	CCDS36716.2	1	793	89	3.22	0.5	383.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048280	Zfp738	ENSMUST00000110973	ENSMUSP00000106600	TRANSLATION	protein_coding	stop	-	3	126	5	2.22	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048280	Zfp738	ENSMUST00000223721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090641	Zfp712	ENSMUST00000167565	ENSMUSP00000126665	TRANSLATION	protein_coding	-	CCDS49297.1	1	705	84	1.4	0.5	466	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021684	Pde8b	ENSMUST00000162328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021684	Pde8b	ENSMUST00000159598	ENSMUSP00000124447	TRANSLATION	protein_coding	stop	-	5	102	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000162153	ENSMUSP00000124704	TRANSLATION	protein_coding	-	CCDS84052.1	1	780	8	7.55	2.7	358.8	0	-4,-7	-	-	12.586	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000022192	ENSMUSP00000022192	TRANSLATION	protein_coding	-	-	5	838	8	7.55	2.9	406	0	-4,-5	-	-	15.445	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000162670	ENSMUSP00000125237	TRANSLATION	protein_coding	start	-	1	196	2	3.55	0	184.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000162292	ENSMUSP00000124068	TRANSLATION	protein_coding	-	CCDS49331.1	1	788	8	7.55	3.9	406	0	-4,-5	-	-	15.79	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000159608	ENSMUSP00000125191	TRANSLATION	protein_coding	-	-	5	674	7	3.882	0	237.7	0	-4,-5	-	-	5.25	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000160412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021684	Pde8b	ENSMUST00000160957	ENSMUSP00000125115	TRANSLATION	protein_coding	stop	-	5	329	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021684	Pde8b	ENSMUST00000067082	ENSMUSP00000070465	TRANSLATION	protein_coding	-	-	5	865	8	7.55	1.2	459.5	0	-4,-5	-	-	18.069	PRINCIPAL:5
ENSMUSG00000021684	Pde8b	ENSMUST00000162716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021684	Pde8b	ENSMUST00000172104	ENSMUSP00000128987	TRANSLATION	protein_coding	-	-	5	830	8	7.55	1.2	459.5	0	-4,-5	-	-	18.069	ALTERNATIVE:2
ENSMUSG00000021684	Pde8b	ENSMUST00000162882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021684	Pde8b	ENSMUST00000162412	ENSMUSP00000124409	TRANSLATION	protein_coding	-	CCDS49332.1	1	730	8	7.55	0.5	338.3	0	-4,-7	-	-	12	MINOR
ENSMUSG00000090658	Prss47	ENSMUST00000203968	ENSMUSP00000145196	TRANSLATION	protein_coding	-	-	5	395	5	4.2	0	211.3	0	-2,-4	-	-	17	PRINCIPAL:5
ENSMUSG00000090658	Prss47	ENSMUST00000222769	ENSMUSP00000152310	TRANSLATION	protein_coding	-	-	5	301	5	3.8	0.5	211.3	0	-4,-7	-	-	16.202	ALTERNATIVE:2
ENSMUSG00000090658	Prss47	ENSMUST00000182457	ENSMUSP00000145271	TRANSLATION	protein_coding	start/stop	-	5	276	5	4.2	0	211.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090658	Prss47	ENSMUST00000220767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021478	Drd1	ENSMUST00000221470	ENSMUSP00000152768	TRANSLATION	protein_coding	-	-	1	439	0	0.48	0	237.6	7	-4,-6	-	-	9.558	MINOR
ENSMUSG00000021478	Drd1	ENSMUST00000222706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021478	Drd1	ENSMUST00000021932	ENSMUSP00000021932	TRANSLATION	protein_coding	-	CCDS26524.1	1	446	0	0.81	1.5	237.6	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062382	Ftl1-ps1	ENSMUST00000222435	ENSMUSP00000152609	TRANSLATION	protein_coding	-	-	-	183	11	2	1.5	104.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062382	Ftl1-ps1	ENSMUST00000221435	ENSMUSP00000152633	TRANSLATION	protein_coding	stop	-	3	30	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021556	Golm1	ENSMUST00000095739	ENSMUSP00000093410	TRANSLATION	protein_coding	-	CCDS26576.1	1	393	0	0	0.5	0	0	-3,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000021556	Golm1	ENSMUST00000224160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021556	Golm1	ENSMUST00000022039	ENSMUSP00000022039	TRANSLATION	protein_coding	-	CCDS26576.1	1	393	0	0	0.5	0	0	-3,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000021556	Golm1	ENSMUST00000225333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099787	Vmn1r192	ENSMUST00000072632	ENSMUSP00000072426	TRANSLATION	protein_coding	-	CCDS26311.1	-	300	0	0	0.5	117.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000099787	Vmn1r192	ENSMUST00000238109	ENSMUSP00000157643	TRANSLATION	protein_coding	-	CCDS26311.1	-	300	0	0	0.5	117.5	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021611	Tert	ENSMUST00000223325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021611	Tert	ENSMUST00000221522	ENSMUSP00000152750	TRANSLATION	nonsense_mediated_decay	-	-	1	187	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021611	Tert	ENSMUST00000222912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021611	Tert	ENSMUST00000223303	ENSMUSP00000152646	TRANSLATION	nonsense_mediated_decay	-	-	1	187	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021611	Tert	ENSMUST00000222251	ENSMUSP00000152835	TRANSLATION	nonsense_mediated_decay	start	-	1	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021611	Tert	ENSMUST00000223196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021611	Tert	ENSMUST00000022104	ENSMUSP00000022104	TRANSLATION	protein_coding	-	CCDS26633.1	1	1122	0	7.87	1.5	142.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000021700	Rab3c	ENSMUST00000223922	ENSMUSP00000153347	TRANSLATION	protein_coding	-	-	-	225	19	4	8.8	202.9	0	-4,-5	-	-	19.952	MINOR
ENSMUSG00000021700	Rab3c	ENSMUST00000224180	ENSMUSP00000153136	TRANSLATION	protein_coding	-	-	-	169	16	3	0.5	171.4	0	-4,-6	-	-	12.114	MINOR
ENSMUSG00000021700	Rab3c	ENSMUST00000224287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021700	Rab3c	ENSMUST00000226040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021700	Rab3c	ENSMUST00000167824	ENSMUSP00000132945	TRANSLATION	protein_coding	-	CCDS26764.1	1	227	19	4	17	202.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000052075	1700029F12Rik	ENSMUST00000222360	-	NO_TRANSLATION	lincRNA
ENSMUSG00000052075	1700029F12Rik	ENSMUST00000091377	ENSMUSP00000088938	TRANSLATION	protein_coding	-	CCDS36755.1	1	147	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000052075	1700029F12Rik	ENSMUST00000221277	-	NO_TRANSLATION	lincRNA
ENSMUSG00000058900	Rsl1	ENSMUST00000225334	ENSMUSP00000153578	TRANSLATION	nonsense_mediated_decay	-	-	-	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058900	Rsl1	ENSMUST00000021997	ENSMUSP00000021997	TRANSLATION	protein_coding	-	CCDS26613.1	1	485	48	0.42	0.5	305.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000113450	Gm49359	ENSMUST00000223247	ENSMUSP00000152739	TRANSLATION	protein_coding	-	-	1	150	0	1	0.5	78.3	0	-4,-5	-	-	1.602	MINOR
ENSMUSG00000113450	Gm49359	ENSMUST00000221747	ENSMUSP00000152662	TRANSLATION	protein_coding	-	CCDS36697.1	1	353	35	3.2	0.5	262	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000113450	Gm49359	ENSMUST00000221951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051037	Zfp455	ENSMUST00000117110	ENSMUSP00000113356	TRANSLATION	protein_coding	-	-	1	396	47	1.1	0	216.2	0	-4,-5	-	-	13.284	MINOR
ENSMUSG00000051037	Zfp455	ENSMUST00000120861	ENSMUSP00000112546	TRANSLATION	protein_coding	-	CCDS49300.1	2	461	47	1.1	0.5	294.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021461	Fancc	ENSMUST00000160166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021461	Fancc	ENSMUST00000159056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021461	Fancc	ENSMUST00000160735	ENSMUSP00000125710	TRANSLATION	protein_coding	start/stop	-	3	117	0	0	0	114.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000159024	ENSMUSP00000124325	TRANSLATION	protein_coding	stop	-	5	216	0	0	0	314.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000160151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021461	Fancc	ENSMUST00000162375	ENSMUSP00000124759	TRANSLATION	protein_coding	stop	-	5	212	0	0	0	337.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000221054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021461	Fancc	ENSMUST00000161507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021461	Fancc	ENSMUST00000161656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021461	Fancc	ENSMUST00000162971	ENSMUSP00000123972	TRANSLATION	protein_coding	stop	-	5	229	0	0	0	368.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000163091	ENSMUSP00000124406	TRANSLATION	protein_coding	-	CCDS84029.1	5	591	0	0	0.5	779.4	0	-4,-5	-	-	3.582	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000161977	ENSMUSP00000123817	TRANSLATION	protein_coding	-	CCDS36700.1	1	558	0	0	1.5	819.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021461	Fancc	ENSMUST00000099444	ENSMUSP00000097043	TRANSLATION	protein_coding	-	CCDS70472.1	5	461	0	0	1.5	640.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000160336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021461	Fancc	ENSMUST00000160617	ENSMUSP00000123767	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000160333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021461	Fancc	ENSMUST00000073029	ENSMUSP00000072788	TRANSLATION	protein_coding	-	CCDS36700.1	1	558	0	0	1.5	819.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021461	Fancc	ENSMUST00000160931	ENSMUSP00000124165	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	52.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021461	Fancc	ENSMUST00000220684	ENSMUSP00000152119	TRANSLATION	protein_coding	-	-	5	412	0	0	0	652.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021418	Rpp40	ENSMUST00000174231	ENSMUSP00000134210	TRANSLATION	protein_coding	start	-	2	84	0	0	0	58.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021418	Rpp40	ENSMUST00000171686	ENSMUSP00000130290	TRANSLATION	protein_coding	-	CCDS26451.2	1	363	0	0	7.5	314	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000021418	Rpp40	ENSMUST00000174230	ENSMUSP00000134228	TRANSLATION	protein_coding	-	-	5	340	0	0	1.2	258.4	0	-4,-2	-	-	2.757	MINOR
ENSMUSG00000021418	Rpp40	ENSMUST00000174852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095514	D13Ertd608e	ENSMUST00000179131	ENSMUSP00000136381	TRANSLATION	protein_coding	start/stop	-	5	139	0	0	0	251.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095514	D13Ertd608e	ENSMUST00000195797	ENSMUSP00000142107	TRANSLATION	protein_coding	-	-	1	151	0	0	0	264.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056223	Spata31	ENSMUST00000070216	ENSMUSP00000097025	TRANSLATION	protein_coding	-	CCDS26602.1	1	1014	0	0	0.5	301	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056223	Spata31	ENSMUST00000221202	ENSMUSP00000152205	TRANSLATION	protein_coding	-	-	5	66	0	0	0	0	1	-4,-5	-	-	0	MINOR
ENSMUSG00000000078	Klf6	ENSMUST00000000080	ENSMUSP00000000080	TRANSLATION	protein_coding	-	CCDS26229.1	1	318	12	1.7	1.5	60.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000000078	Klf6	ENSMUST00000221734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000078	Klf6	ENSMUST00000222857	ENSMUSP00000152088	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060969	Irx1	ENSMUST00000077337	ENSMUSP00000076562	TRANSLATION	protein_coding	-	CCDS26627.1	1	480	0	0	3.9	58	0	-2,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000060969	Irx1	ENSMUST00000223379	ENSMUSP00000152247	TRANSLATION	protein_coding	start	-	2	86	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000060969	Irx1	ENSMUST00000223460	ENSMUSP00000152128	TRANSLATION	protein_coding	start/stop	-	3	273	0	0	0	58	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000223894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021488	Nsd1	ENSMUST00000224693	ENSMUSP00000152939	TRANSLATION	protein_coding	-	-	-	158	0	0.94	0	58.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000225169	ENSMUSP00000153503	TRANSLATION	protein_coding	stop	-	-	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000225982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021488	Nsd1	ENSMUST00000225194	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021488	Nsd1	ENSMUST00000225405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021488	Nsd1	ENSMUST00000224973	ENSMUSP00000153677	TRANSLATION	protein_coding	-	-	-	2588	28	7.84	0	139	0	-4,-5	-	-	12.966	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000224156	ENSMUSP00000153366	TRANSLATION	protein_coding	-	-	-	158	0	0.94	0	58.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000224918	ENSMUSP00000153511	TRANSLATION	protein_coding	-	-	-	158	0	0.94	0	58.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021488	Nsd1	ENSMUST00000224338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021488	Nsd1	ENSMUST00000099490	ENSMUSP00000097089	TRANSLATION	protein_coding	-	CCDS36673.1	5	2691	28	8.78	0.5	191.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000082316	Vmn1r221	ENSMUST00000236177	ENSMUSP00000157606	TRANSLATION	protein_coding	-	-	-	312	0	0	0.5	121.6	5	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000082316	Vmn1r221	ENSMUST00000122275	ENSMUSP00000157477	TRANSLATION	protein_coding	-	-	-	312	0	0	0.5	121.6	5	0,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042118	Bhmt2	ENSMUST00000015941	ENSMUSP00000015941	TRANSLATION	protein_coding	-	CCDS26689.1	1	363	4	6.68	7.6	150.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000046351	Zfp322a	ENSMUST00000125328	ENSMUSP00000120804	TRANSLATION	protein_coding	stop	-	2	126	6	0.8	0	28	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046351	Zfp322a	ENSMUST00000152557	ENSMUSP00000118754	TRANSLATION	protein_coding	stop	-	2	180	14	1.8	0	55.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046351	Zfp322a	ENSMUST00000223795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046351	Zfp322a	ENSMUST00000050101	ENSMUSP00000061524	TRANSLATION	protein_coding	-	CCDS26337.1	1	410	38	2.6	0.5	166.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000046351	Zfp322a	ENSMUST00000145451	ENSMUSP00000119883	TRANSLATION	protein_coding	stop	-	2	179	14	1.8	0	55.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046351	Zfp322a	ENSMUST00000224779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025451	Paip1	ENSMUST00000173339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025451	Paip1	ENSMUST00000174533	ENSMUSP00000134365	TRANSLATION	protein_coding	start/stop	-	5	189	0	3.55	0	26.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025451	Paip1	ENSMUST00000174691	ENSMUSP00000134502	TRANSLATION	protein_coding	start/stop	-	5	207	0	3.3	0	110.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025451	Paip1	ENSMUST00000026520	ENSMUSP00000026520	TRANSLATION	protein_coding	-	CCDS26796.1	1	400	0	6.63	8.8	156.7	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025451	Paip1	ENSMUST00000126957	ENSMUSP00000117256	TRANSLATION	protein_coding	-	-	5	484	0	6.63	1.7	156.7	0	-4,-6	-	-	12.27	MINOR
ENSMUSG00000025451	Paip1	ENSMUST00000132304	ENSMUSP00000134617	TRANSLATION	nonsense_mediated_decay	start	-	5	276	0	2	0	81.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025451	Paip1	ENSMUST00000109203	ENSMUSP00000104826	TRANSLATION	protein_coding	-	CCDS36791.1	5	367	0	6.63	7.6	156.7	0	-3,-6	-	-	14.538	ALTERNATIVE:1
ENSMUSG00000025451	Paip1	ENSMUST00000173627	ENSMUSP00000134051	TRANSLATION	protein_coding	-	-	5	410	0	6.63	0	156.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000050799	H2bc1	ENSMUST00000052776	ENSMUSP00000056604	TRANSLATION	protein_coding	-	CCDS26373.1	-	127	0	1	8.8	88.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000057170	Prl3d1	ENSMUST00000225330	ENSMUSP00000152890	TRANSLATION	protein_coding	-	CCDS56874.1	-	224	0	2.6	1.5	237.7	0	3,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000057170	Prl3d1	ENSMUST00000082079	ENSMUSP00000080731	TRANSLATION	protein_coding	-	-	1	223	0	2.6	1.5	237.7	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000021499	Catsper3	ENSMUST00000021961	ENSMUSP00000021961	TRANSLATION	protein_coding	-	CCDS56885.1	1	395	0	3.74	0.5	110.6	4	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021499	Catsper3	ENSMUST00000109898	ENSMUSP00000105524	TRANSLATION	protein_coding	-	CCDS26555.1	1	382	0	3.24	0.5	98.4	3	-4,-2	-	-	10.266	MINOR
ENSMUSG00000038267	Slc22a23	ENSMUST00000128392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038267	Slc22a23	ENSMUST00000040336	ENSMUSP00000042742	TRANSLATION	protein_coding	-	CCDS26446.1	1	689	0	3.4796	1.5	85.5	12	-4,-7	-	-	11.658	PRINCIPAL:1
ENSMUSG00000038267	Slc22a23	ENSMUST00000145038	ENSMUSP00000122376	TRANSLATION	nonsense_mediated_decay	start	-	5	182	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038267	Slc22a23	ENSMUST00000148390	ENSMUSP00000122283	TRANSLATION	protein_coding	start	-	5	566	0	3.4796	0	90.7	12	-4,-5	-	-	-1	MINOR
ENSMUSG00000038267	Slc22a23	ENSMUST00000143353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042258	Isl1	ENSMUST00000176044	ENSMUSP00000135567	TRANSLATION	protein_coding	-	-	1	326	16	3.198	0.5	155.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000042258	Isl1	ENSMUST00000176812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042258	Isl1	ENSMUST00000176444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042258	Isl1	ENSMUST00000036060	ENSMUSP00000044879	TRANSLATION	protein_coding	-	CCDS26790.1	1	349	16	3.198	17.3	155.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000042258	Isl1	ENSMUST00000177469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021754	Map3k1	ENSMUST00000175936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021754	Map3k1	ENSMUST00000130594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021754	Map3k1	ENSMUST00000109267	ENSMUSP00000104890	TRANSLATION	protein_coding	-	CCDS26771.1	2	1493	19	4.74	0.5	246	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021754	Map3k1	ENSMUST00000145055	ENSMUSP00000117863	TRANSLATION	protein_coding	stop	-	3	263	0	0	0	24	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021754	Map3k1	ENSMUST00000133364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062551	Prl2c1	ENSMUST00000054932	ENSMUSP00000053446	TRANSLATION	protein_coding	-	CCDS36626.1	5	226	0	3	1.5	250	0	3,-2	-	-	11.874	PRINCIPAL:2
ENSMUSG00000062551	Prl2c1	ENSMUST00000110335	ENSMUSP00000105964	TRANSLATION	protein_coding	-	-	5	228	0	3	1.5	252.1	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000050244	Heatr1	ENSMUST00000221046	ENSMUSP00000152410	TRANSLATION	nonsense_mediated_decay	-	-	1	344	0	2.88	0	51.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050244	Heatr1	ENSMUST00000221746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050244	Heatr1	ENSMUST00000059270	ENSMUSP00000054084	TRANSLATION	protein_coding	-	CCDS26240.1	5	2143	0	12.14	5.1	238.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000050244	Heatr1	ENSMUST00000221616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050244	Heatr1	ENSMUST00000222091	ENSMUSP00000152435	TRANSLATION	nonsense_mediated_decay	start	-	2	744	0	6.12	0	146.9	0	0,-4	-	-	-1	MINOR
ENSMUSG00000050244	Heatr1	ENSMUST00000223324	ENSMUSP00000152797	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050244	Heatr1	ENSMUST00000222817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050244	Heatr1	ENSMUST00000221051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021415	4933417A18Rik	ENSMUST00000160905	ENSMUSP00000125206	TRANSLATION	nonsense_mediated_decay	-	-	1	227	0	0	0.5	287.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021415	4933417A18Rik	ENSMUST00000160279	ENSMUSP00000125324	TRANSLATION	protein_coding	-	CCDS49233.1	1	227	0	0	0.5	287.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000062727	H2bc12	ENSMUST00000110455	ENSMUSP00000106085	TRANSLATION	protein_coding	-	CCDS26305.1	-	126	0	1	7.6	92.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001707	Eef1e1	ENSMUST00000001757	ENSMUSP00000001757	TRANSLATION	protein_coding	-	CCDS26465.1	1	174	0	3.75	8.5	29.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001707	Eef1e1	ENSMUST00000223823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001707	Eef1e1	ENSMUST00000224487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091682	Trgc3	ENSMUST00000164407	ENSMUSP00000132340	TRANSLATION	protein_coding	start	-	1	172	0	1	0	38.9	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000091682	Trgc3	ENSMUST00000198163	ENSMUSP00000143383	TRANSLATION	TR_C_gene	start	-	-	148	0	1	0	38.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000057842	Zfp595	ENSMUST00000109735	ENSMUSP00000105357	TRANSLATION	protein_coding	-	CCDS36712.1	1	625	75	1.4	0.5	315.8	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000057842	Zfp595	ENSMUST00000169142	ENSMUSP00000129905	TRANSLATION	nonsense_mediated_decay	-	-	1	625	75	1.4	0.5	315.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057842	Zfp595	ENSMUST00000168892	ENSMUSP00000126862	TRANSLATION	protein_coding	-	CCDS36712.1	1	625	75	1.4	0.5	315.8	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000057842	Zfp595	ENSMUST00000171466	ENSMUSP00000127010	TRANSLATION	protein_coding	-	-	1	622	75	1.4	0.5	315.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000057842	Zfp595	ENSMUST00000133177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044566	Cage1	ENSMUST00000110233	ENSMUSP00000105862	TRANSLATION	protein_coding	-	CCDS26460.1	5	849	0	0	1.5	837.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044566	Cage1	ENSMUST00000131066	ENSMUSP00000122393	TRANSLATION	protein_coding	stop	-	1	318	0	0	0	434.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044566	Cage1	ENSMUST00000074969	ENSMUSP00000074499	TRANSLATION	protein_coding	-	CCDS26460.1	5	849	0	0	1.5	837.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044566	Cage1	ENSMUST00000089840	ENSMUSP00000087278	TRANSLATION	protein_coding	-	-	1	515	0	0	0	657.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000069273	H3c6	ENSMUST00000105107	ENSMUSP00000100739	TRANSLATION	protein_coding	-	CCDS26347.1	-	136	0	1	21.5	181.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000021327	Zkscan3	ENSMUST00000070785	ENSMUSP00000068424	TRANSLATION	protein_coding	-	CCDS26274.1	1	553	28	2.35	1.5	346.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021327	Zkscan3	ENSMUST00000116434	ENSMUSP00000112135	TRANSLATION	protein_coding	-	CCDS26274.1	1	553	28	2.35	1.5	346.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021327	Zkscan3	ENSMUST00000224820	ENSMUSP00000153231	TRANSLATION	protein_coding	-	-	-	281	0	1	0	141.6	0	-4,-5	-	-	2.556	MINOR
ENSMUSG00000021327	Zkscan3	ENSMUST00000151467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021327	Zkscan3	ENSMUST00000117721	ENSMUSP00000112862	TRANSLATION	protein_coding	-	-	1	257	0	1.75	0	170.9	0	-4,-5	-	-	4.47	MINOR
ENSMUSG00000021327	Zkscan3	ENSMUST00000116433	ENSMUSP00000112134	TRANSLATION	protein_coding	-	-	1	298	0	1.75	0	167.3	0	-4,-5	-	-	4.47	MINOR
ENSMUSG00000021327	Zkscan3	ENSMUST00000223831	ENSMUSP00000153241	TRANSLATION	protein_coding	-	-	-	386	28	0.6	0.5	203.2	0	-4,-5	-	-	7.53	MINOR
ENSMUSG00000021327	Zkscan3	ENSMUST00000145631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021703	Serinc5	ENSMUST00000049488	ENSMUSP00000047547	TRANSLATION	protein_coding	-	CCDS36744.1	1	461	0	0	6.3	505.6	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000021703	Serinc5	ENSMUST00000224458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021703	Serinc5	ENSMUST00000224250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052551	Adarb2	ENSMUST00000123187	ENSMUSP00000120757	TRANSLATION	protein_coding	-	CCDS70428.1	1	701	14	6.6	0.5	390.9	0	-4,-2	-	-	9.462	MINOR
ENSMUSG00000052551	Adarb2	ENSMUST00000135574	ENSMUSP00000115148	TRANSLATION	nonsense_mediated_decay	-	-	5	745	20	7.64	0.5	431.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052551	Adarb2	ENSMUST00000223223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052551	Adarb2	ENSMUST00000139438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052551	Adarb2	ENSMUST00000064473	ENSMUSP00000064775	TRANSLATION	protein_coding	-	CCDS26231.1	1	745	20	7.64	0.5	431.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000052551	Adarb2	ENSMUST00000223148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032999	Nlrp4f	ENSMUST00000037372	ENSMUSP00000041908	TRANSLATION	protein_coding	-	CCDS49294.1	5	937	10	9.526	1.5	260.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032999	Nlrp4f	ENSMUST00000222273	ENSMUSP00000152381	TRANSLATION	protein_coding	stop	-	5	84	0	1.75	0	77.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032999	Nlrp4f	ENSMUST00000223418	ENSMUSP00000152297	TRANSLATION	protein_coding	stop	-	2	112	0	2.464	0	77.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032999	Nlrp4f	ENSMUST00000222559	ENSMUSP00000152824	TRANSLATION	protein_coding	stop	-	2	181	7	1.564	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032999	Nlrp4f	ENSMUST00000221659	ENSMUSP00000152151	TRANSLATION	protein_coding	-	CCDS49294.1	5	937	10	9.526	1.5	260.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032999	Nlrp4f	ENSMUST00000222514	ENSMUSP00000152418	TRANSLATION	nonsense_mediated_decay	-	-	2	806	10	6.214	0	215.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032999	Nlrp4f	ENSMUST00000221280	ENSMUSP00000152214	TRANSLATION	protein_coding	start	-	3	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032999	Nlrp4f	ENSMUST00000220448	ENSMUSP00000152542	TRANSLATION	protein_coding	start	-	3	172	0	3.612	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004344	Gpx5	ENSMUST00000110491	ENSMUSP00000106117	TRANSLATION	protein_coding	-	CCDS26270.1	1	221	0	4.15	1.5	144.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051258	Olfr1362	ENSMUST00000051874	ENSMUSP00000061660	TRANSLATION	protein_coding	-	CCDS26282.1	-	308	0	0.42	3.9	172.7	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000021714	Cenpk	ENSMUST00000225939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021714	Cenpk	ENSMUST00000224098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021714	Cenpk	ENSMUST00000224857	ENSMUSP00000152995	TRANSLATION	nonsense_mediated_decay	-	-	-	91	0	0	0	94.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021714	Cenpk	ENSMUST00000224179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021714	Cenpk	ENSMUST00000022227	ENSMUSP00000022227	TRANSLATION	protein_coding	-	CCDS26749.1	1	306	0	0	0.5	404.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021714	Cenpk	ENSMUST00000070761	ENSMUSP00000070910	TRANSLATION	protein_coding	-	CCDS26750.1	1	253	0	0	0.5	278.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021714	Cenpk	ENSMUST00000225557	ENSMUSP00000153237	TRANSLATION	protein_coding	stop	-	-	94	0	0	0	96.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021714	Cenpk	ENSMUST00000224500	ENSMUSP00000153688	TRANSLATION	nonsense_mediated_decay	-	-	-	91	0	0	0	94.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021578	Ccdc127	ENSMUST00000159931	ENSMUSP00000124009	TRANSLATION	nonsense_mediated_decay	-	-	5	171	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021578	Ccdc127	ENSMUST00000022063	ENSMUSP00000022063	TRANSLATION	protein_coding	-	CCDS26644.1	1	260	0	0	7.6	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000021578	Ccdc127	ENSMUST00000162376	ENSMUSP00000123805	TRANSLATION	protein_coding	stop	-	1	238	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021578	Ccdc127	ENSMUST00000160021	ENSMUSP00000124193	TRANSLATION	protein_coding	-	CCDS49314.1	1	163	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021578	Ccdc127	ENSMUST00000223491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021578	Ccdc127	ENSMUST00000162672	ENSMUSP00000125027	TRANSLATION	protein_coding	-	-	3	61	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000104630	Trgj3	ENSMUST00000103562	ENSMUSP00000142784	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000069307	Hist1h2bq	ENSMUST00000110469	ENSMUSP00000106095	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	1	8.8	92.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069307	Hist1h2bq	ENSMUST00000091749	ENSMUSP00000089343	TRANSLATION	protein_coding	-	CCDS49213.1	1	134	0	1	0.5	92.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021427	Ssr1	ENSMUST00000021864	ENSMUSP00000021864	TRANSLATION	protein_coding	-	CCDS26459.1	1	286	0	0	5	404.4	2	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000021427	Ssr1	ENSMUST00000225319	ENSMUSP00000152975	TRANSLATION	protein_coding	-	-	-	318	0	0	0	371.5	2	2,-2	-	-	4.026	MINOR
ENSMUSG00000021427	Ssr1	ENSMUST00000224399	ENSMUSP00000153346	TRANSLATION	protein_coding	stop	-	-	115	0	0	0	107.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021427	Ssr1	ENSMUST00000225246	ENSMUSP00000153120	TRANSLATION	protein_coding	-	-	-	298	0	0	0	394.9	2	2,-2	-	-	5.43	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000080127	ENSMUSP00000079026	TRANSLATION	protein_coding	-	CCDS36745.1	1	366	8	5.65	1.5	120.6	0	-4,-6	-	-	16.63	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000060490	ENSMUSP00000050471	TRANSLATION	protein_coding	-	CCDS70484.1	1	354	8	5.65	17	120.6	0	-4,-6	-	-	20.506	PRINCIPAL:1
ENSMUSG00000007617	Homer1	ENSMUST00000079086	ENSMUSP00000078093	TRANSLATION	protein_coding	-	CCDS36746.1	1	370	8	5.79	0.5	119.2	0	-4,-2	-	-	16.704	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000102752	ENSMUSP00000099813	TRANSLATION	protein_coding	-	CCDS26687.1	1	186	8	4	0.5	120.6	0	-4,-6	-	-	13.206	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109494	ENSMUSP00000105120	TRANSLATION	protein_coding	-	-	1	193	8	4	0	120.6	0	-4,-6	-	-	13.206	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109497	ENSMUSP00000105123	TRANSLATION	protein_coding	-	-	5	180	0	1.65	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109493	ENSMUSP00000105119	TRANSLATION	protein_coding	-	-	5	233	8	4	0	120.6	0	-4,-6	-	-	13.206	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109498	ENSMUSP00000105124	TRANSLATION	protein_coding	-	-	5	192	0	1.65	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000220609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007617	Homer1	ENSMUST00000109492	ENSMUSP00000105118	TRANSLATION	protein_coding	-	CCDS84048.1	1	203	8	4	0.5	120.6	0	-4,-6	-	-	13.206	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109495	ENSMUSP00000105121	TRANSLATION	protein_coding	-	-	5	191	8	4	0	120.6	0	-4,-6	-	-	13.206	MINOR
ENSMUSG00000007617	Homer1	ENSMUST00000109496	ENSMUSP00000105122	TRANSLATION	protein_coding	-	-	5	224	8	3.65	1.2	140.8	0	-4,-6	-	-	13.77	MINOR
ENSMUSG00000058246	Gm10037	ENSMUST00000231606	ENSMUSP00000156286	TRANSLATION	protein_coding	start	-	-	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058246	Gm10037	ENSMUST00000060609	ENSMUSP00000051123	TRANSLATION	protein_coding	-	-	5	104	0	0.8	0	82.6	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000058246	Gm10037	ENSMUST00000221266	ENSMUSP00000152830	TRANSLATION	protein_coding	-	-	2	91	0	0.8	0.5	82.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000058246	Gm10037	ENSMUST00000221620	ENSMUSP00000152317	TRANSLATION	protein_coding	-	-	3	91	0	0.8	0.5	82.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000058246	Gm10037	ENSMUST00000222626	ENSMUSP00000152101	TRANSLATION	protein_coding	-	-	3	74	0	0.8	0	82.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021715	Cwc27	ENSMUST00000141495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021715	Cwc27	ENSMUST00000022228	ENSMUSP00000022228	TRANSLATION	protein_coding	-	CCDS26752.1	1	469	9	5.3	3.9	151.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021715	Cwc27	ENSMUST00000147514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021715	Cwc27	ENSMUST00000154165	ENSMUSP00000119076	TRANSLATION	protein_coding	stop	-	3	83	4	2.5	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035493	Tgfbi	ENSMUST00000226024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035493	Tgfbi	ENSMUST00000223661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035493	Tgfbi	ENSMUST00000225600	ENSMUSP00000153546	TRANSLATION	nonsense_mediated_decay	-	-	-	651	0	6	0	369.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000035493	Tgfbi	ENSMUST00000045173	ENSMUSP00000037719	TRANSLATION	protein_coding	-	CCDS36680.1	1	683	0	6	0.5	369.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000035493	Tgfbi	ENSMUST00000225300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019726	Lyst	ENSMUST00000231064	ENSMUSP00000155251	TRANSLATION	protein_coding	start/stop	-	-	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000019726	Lyst	ENSMUST00000221717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000220937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000221587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000223053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000223527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000221483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019726	Lyst	ENSMUST00000110559	ENSMUSP00000106188	TRANSLATION	protein_coding	-	CCDS36597.1	1	3787	0	8.12	0.5	468.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000017756	Slc12a7	ENSMUST00000221813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017756	Slc12a7	ENSMUST00000222742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017756	Slc12a7	ENSMUST00000220535	ENSMUSP00000152846	TRANSLATION	nonsense_mediated_decay	-	-	1	151	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017756	Slc12a7	ENSMUST00000223008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017756	Slc12a7	ENSMUST00000221196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017756	Slc12a7	ENSMUST00000222253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017756	Slc12a7	ENSMUST00000220686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017756	Slc12a7	ENSMUST00000222309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017756	Slc12a7	ENSMUST00000017900	ENSMUSP00000017900	TRANSLATION	protein_coding	-	CCDS26635.1	1	1083	0	0	1.5	365.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000017756	Slc12a7	ENSMUST00000220522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017756	Slc12a7	ENSMUST00000223454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035139	Secisbp2	ENSMUST00000127360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035139	Secisbp2	ENSMUST00000040117	ENSMUSP00000045740	TRANSLATION	protein_coding	-	CCDS36665.1	1	858	0	0	0.5	73.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035139	Secisbp2	ENSMUST00000110044	ENSMUSP00000105671	TRANSLATION	protein_coding	-	-	2	414	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035139	Secisbp2	ENSMUST00000154202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035139	Secisbp2	ENSMUST00000146011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035139	Secisbp2	ENSMUST00000153877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038402	Foxf2	ENSMUST00000042054	ENSMUSP00000046789	TRANSLATION	protein_coding	-	CCDS26424.1	1	446	0	0.4	0.5	125.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021710	Nln	ENSMUST00000224086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021710	Nln	ENSMUST00000225478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021710	Nln	ENSMUST00000225704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021710	Nln	ENSMUST00000225324	ENSMUSP00000153299	TRANSLATION	protein_coding	start/stop	-	-	151	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021710	Nln	ENSMUST00000224475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021710	Nln	ENSMUST00000109315	ENSMUSP00000104938	TRANSLATION	protein_coding	-	CCDS36772.1	1	704	8	12	6.3	520.5	0	-3,1	-	-	20	PRINCIPAL:1
ENSMUSG00000021710	Nln	ENSMUST00000224058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021710	Nln	ENSMUST00000224945	ENSMUSP00000153227	TRANSLATION	protein_coding	-	-	-	683	8	11	0	472.8	0	-3,1	-	-	13.14	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000224576	ENSMUSP00000153425	TRANSLATION	nonsense_mediated_decay	-	-	-	57	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000224510	ENSMUSP00000153382	TRANSLATION	protein_coding	-	-	-	635	0	5.84	0.5	30.3	0	-4,-5	-	-	9.822	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000225397	ENSMUSP00000153298	TRANSLATION	protein_coding	stop	-	-	165	0	2.17	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000223819	ENSMUSP00000152979	TRANSLATION	nonsense_mediated_decay	-	-	-	662	0	6.93	0	30.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000051756	ENSMUSP00000058045	TRANSLATION	protein_coding	-	CCDS36781.1	1	716	0	6.93	1.5	30.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000050377	Il31ra	ENSMUST00000223577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050377	Il31ra	ENSMUST00000223752	ENSMUSP00000153660	TRANSLATION	nonsense_mediated_decay	-	-	-	57	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050377	Il31ra	ENSMUST00000224070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021553	Slc28a3	ENSMUST00000151675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021553	Slc28a3	ENSMUST00000148396	ENSMUSP00000122865	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021553	Slc28a3	ENSMUST00000224906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021553	Slc28a3	ENSMUST00000140760	ENSMUSP00000123681	TRANSLATION	nonsense_mediated_decay	start	-	3	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021553	Slc28a3	ENSMUST00000022036	ENSMUSP00000022036	TRANSLATION	protein_coding	-	CCDS26572.1	1	703	10	7.03	1.5	387.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041236	Vps41	ENSMUST00000072961	ENSMUSP00000072729	TRANSLATION	protein_coding	-	CCDS26257.1	1	853	8	0	0.5	94.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041236	Vps41	ENSMUST00000222102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041236	Vps41	ENSMUST00000222269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041236	Vps41	ENSMUST00000222010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041236	Vps41	ENSMUST00000222813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021311	Mtr	ENSMUST00000099856	ENSMUSP00000097442	TRANSLATION	protein_coding	-	CCDS36591.1	1	1253	29	28.4	1.5	843.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021311	Mtr	ENSMUST00000221190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021311	Mtr	ENSMUST00000221290	ENSMUSP00000152579	TRANSLATION	nonsense_mediated_decay	-	-	1	222	0	2.6	0	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021311	Mtr	ENSMUST00000220473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118537	Shld3	ENSMUST00000133280	ENSMUSP00000159139	TRANSLATION	protein_coding	-	-	1	255	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000009734	Pou6f2	ENSMUST00000222900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009734	Pou6f2	ENSMUST00000175768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009734	Pou6f2	ENSMUST00000176898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009734	Pou6f2	ENSMUST00000175703	ENSMUSP00000139282	TRANSLATION	protein_coding	start	-	5	601	0	2.75	0	162.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009734	Pou6f2	ENSMUST00000139064	ENSMUSP00000114173	TRANSLATION	protein_coding	start	-	1	637	0	2.25	0	145.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009734	Pou6f2	ENSMUST00000223058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009734	Pou6f2	ENSMUST00000176795	ENSMUSP00000134780	TRANSLATION	nonsense_mediated_decay	start	-	5	142	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000009734	Pou6f2	ENSMUST00000184299	ENSMUSP00000138840	TRANSLATION	protein_coding	-	-	1	172	0	0	0	0	0	-3,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000078537	B020031M17Rik	ENSMUST00000080505	ENSMUSP00000111142	TRANSLATION	protein_coding	-	CCDS56906.1	-	173	0	0	0.5	297.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000078537	B020031M17Rik	ENSMUST00000180768	ENSMUSP00000137705	TRANSLATION	protein_coding	-	CCDS56906.1	1	173	0	0	0.5	297.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021693	Kif2a	ENSMUST00000022204	ENSMUSP00000022204	TRANSLATION	protein_coding	-	CCDS49356.1	1	705	11	10.2	8.3	311.7	0	-4,-5	-	-	20.358	PRINCIPAL:2
ENSMUSG00000021693	Kif2a	ENSMUST00000162845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021693	Kif2a	ENSMUST00000159772	ENSMUSP00000125644	TRANSLATION	protein_coding	-	-	5	743	11	10.52	7.3	311.7	0	-4,-5	-	-	20.589	ALTERNATIVE:1
ENSMUSG00000021693	Kif2a	ENSMUST00000122233	ENSMUSP00000112715	TRANSLATION	protein_coding	-	CCDS26759.1	1	716	11	10.52	1.7	311.7	0	-4,-5	-	-	18.288	MINOR
ENSMUSG00000021693	Kif2a	ENSMUST00000117539	ENSMUSP00000113361	TRANSLATION	protein_coding	start	-	1	671	11	10.2	0	311.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021693	Kif2a	ENSMUST00000146395	ENSMUSP00000116070	TRANSLATION	protein_coding	start/stop	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021693	Kif2a	ENSMUST00000117423	ENSMUSP00000113921	TRANSLATION	protein_coding	-	-	5	659	11	10.2	1.7	311.7	0	-4,-5	-	-	17.646	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000142827	ENSMUSP00000115796	TRANSLATION	nonsense_mediated_decay	start	-	3	152	8	2.29	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000109776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021470	Ercc6l2	ENSMUST00000159957	ENSMUSP00000124912	TRANSLATION	nonsense_mediated_decay	-	-	5	205	8	1.65	0	34.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000238465	ENSMUSP00000158755	TRANSLATION	protein_coding	-	-	-	1537	8	8.99	0.5	257.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021470	Ercc6l2	ENSMUST00000143449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021470	Ercc6l2	ENSMUST00000162086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021470	Ercc6l2	ENSMUST00000222300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021470	Ercc6l2	ENSMUST00000095724	ENSMUSP00000093392	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000222855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021470	Ercc6l2	ENSMUST00000067821	ENSMUSP00000069488	TRANSLATION	protein_coding	-	CCDS36701.1	5	699	8	8.99	1.7	257.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021470	Ercc6l2	ENSMUST00000144763	ENSMUSP00000152142	TRANSLATION	protein_coding	-	-	1	273	8	2.29	0	69.7	0	-4,-5	-	-	6	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000021925	ENSMUSP00000021925	TRANSLATION	protein_coding	stop	-	5	589	8	7.04	0	231.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021470	Ercc6l2	ENSMUST00000021926	ENSMUSP00000021926	TRANSLATION	protein_coding	-	-	1	405	0	5.34	0	170.7	0	-4,-7	-	-	0.816	MINOR
ENSMUSG00000021621	Zcchc9	ENSMUST00000022121	ENSMUSP00000022121	TRANSLATION	protein_coding	-	CCDS36742.1	1	271	16	0	6.3	45.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000021621	Zcchc9	ENSMUST00000070886	ENSMUSP00000065158	TRANSLATION	protein_coding	start	-	5	108	8	0	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021621	Zcchc9	ENSMUST00000178084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021621	Zcchc9	ENSMUST00000178637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021621	Zcchc9	ENSMUST00000179368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021458	Aopep	ENSMUST00000221364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000021911	ENSMUSP00000021911	TRANSLATION	protein_coding	-	-	5	822	3	8.013	0	146.1	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000021458	Aopep	ENSMUST00000091560	ENSMUSP00000089148	TRANSLATION	protein_coding	-	CCDS36699.1	1	823	3	8.013	1.5	146.1	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000021458	Aopep	ENSMUST00000220863	ENSMUSP00000152528	TRANSLATION	protein_coding	start	-	1	715	3	8.013	0	146.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000222929	ENSMUSP00000152296	TRANSLATION	protein_coding	start	-	1	182	0	2.14	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000222181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000221108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021458	Aopep	ENSMUST00000222680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000221164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000222282	ENSMUSP00000152404	TRANSLATION	protein_coding	start	-	2	170	0	3.4	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000220485	ENSMUSP00000152277	TRANSLATION	nonsense_mediated_decay	start	-	3	19	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000221820	ENSMUSP00000152578	TRANSLATION	protein_coding	start/stop	-	5	110	0	1.01	0	32.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000223204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000220670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000220884	ENSMUSP00000152100	TRANSLATION	nonsense_mediated_decay	start	-	5	155	0	2.14	0	70.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000220885	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000223073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000221676	ENSMUSP00000152622	TRANSLATION	nonsense_mediated_decay	start	-	3	69	0	0.42	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000223185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000222721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000221501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021458	Aopep	ENSMUST00000222846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000220457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000222907	ENSMUSP00000152666	TRANSLATION	nonsense_mediated_decay	start	-	3	67	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021458	Aopep	ENSMUST00000223007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000220563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021458	Aopep	ENSMUST00000221938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021458	Aopep	ENSMUST00000159152	ENSMUSP00000124560	TRANSLATION	protein_coding	start	-	1	167	0	2.14	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021594	Srd5a1	ENSMUST00000220731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021594	Srd5a1	ENSMUST00000059235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021594	Srd5a1	ENSMUST00000091514	ENSMUSP00000089097	TRANSLATION	protein_coding	-	CCDS26624.1	1	255	0	0	3.9	221.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000064138	Fam172a	ENSMUST00000224013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064138	Fam172a	ENSMUST00000224888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064138	Fam172a	ENSMUST00000091459	ENSMUSP00000089038	TRANSLATION	protein_coding	-	CCDS49318.1	1	371	0	0	7.1	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000064138	Fam172a	ENSMUST00000225709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064138	Fam172a	ENSMUST00000224908	ENSMUSP00000153065	TRANSLATION	protein_coding	stop	-	-	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064138	Fam172a	ENSMUST00000225623	ENSMUSP00000153070	TRANSLATION	protein_coding	stop	-	-	181	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064138	Fam172a	ENSMUST00000224889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064138	Fam172a	ENSMUST00000163257	ENSMUSP00000133140	TRANSLATION	protein_coding	-	CCDS49317.1	5	417	0	0	3	0	0	0,-3	-	-	0.984	MINOR
ENSMUSG00000064138	Fam172a	ENSMUST00000224217	ENSMUSP00000153656	TRANSLATION	nonsense_mediated_decay	-	-	-	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064138	Fam172a	ENSMUST00000099358	ENSMUSP00000096960	TRANSLATION	protein_coding	-	CCDS49319.1	1	307	0	0	2.9	0	0	-4,-5	-	-	0.933	MINOR
ENSMUSG00000113255	Tes3-ps	ENSMUST00000222404	ENSMUSP00000152773	TRANSLATION	protein_coding	-	-	-	259	0	1	16.3	168.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000001542	Ell2	ENSMUST00000222892	ENSMUSP00000152107	TRANSLATION	protein_coding	start/stop	-	3	169	0	3.2	0	162.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001542	Ell2	ENSMUST00000221432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001542	Ell2	ENSMUST00000222564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001542	Ell2	ENSMUST00000222853	ENSMUSP00000152427	TRANSLATION	protein_coding	stop	-	5	172	0	3.3	0	201.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001542	Ell2	ENSMUST00000222194	ENSMUSP00000152557	TRANSLATION	protein_coding	-	-	3	111	0	0	0	112.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000001542	Ell2	ENSMUST00000001583	ENSMUSP00000001583	TRANSLATION	protein_coding	-	CCDS36734.1	1	639	0	6.45	6.3	482.2	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000001542	Ell2	ENSMUST00000221979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001542	Ell2	ENSMUST00000220572	ENSMUSP00000152827	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	0	0	56.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001542	Ell2	ENSMUST00000223535	ENSMUSP00000152085	TRANSLATION	protein_coding	start/stop	-	3	181	0	1	0	201.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021366	Hivep1	ENSMUST00000222854	ENSMUSP00000152442	TRANSLATION	protein_coding	start/stop	-	3	241	4	1.75	0	21.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021366	Hivep1	ENSMUST00000220525	ENSMUSP00000152436	TRANSLATION	protein_coding	stop	-	3	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021366	Hivep1	ENSMUST00000060148	ENSMUSP00000056147	TRANSLATION	protein_coding	-	CCDS36643.1	5	2688	15	2.75	0.5	79.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021366	Hivep1	ENSMUST00000222491	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021366	Hivep1	ENSMUST00000220801	ENSMUSP00000152185	TRANSLATION	nonsense_mediated_decay	start	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015533	Itga2	ENSMUST00000224204	ENSMUSP00000153056	TRANSLATION	protein_coding	stop	-	-	154	0	3.13	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015533	Itga2	ENSMUST00000056117	ENSMUSP00000053891	TRANSLATION	protein_coding	-	CCDS26787.1	1	1178	20	16.665	5.3	357.8	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000021314	Amph	ENSMUST00000239207	ENSMUSP00000159202	TRANSLATION	protein_coding	-	-	-	820	0	9.45	0	220.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021314	Amph	ENSMUST00000197545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021314	Amph	ENSMUST00000222698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021314	Amph	ENSMUST00000200466	ENSMUSP00000142766	TRANSLATION	protein_coding	-	CCDS79165.1	1	690	0	9.45	0.5	220.1	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021314	Amph	ENSMUST00000200273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021314	Amph	ENSMUST00000003345	ENSMUSP00000003345	TRANSLATION	protein_coding	-	CCDS26258.1	1	686	0	9.45	0.5	220.1	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000069306	Hist1h4m	ENSMUST00000104941	ENSMUSP00000100546	TRANSLATION	protein_coding	-	CCDS56872.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000074874	Ctla2b	ENSMUST00000225439	ENSMUSP00000153559	TRANSLATION	nonsense_mediated_decay	-	-	-	36	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074874	Ctla2b	ENSMUST00000021884	ENSMUSP00000021884	TRANSLATION	protein_coding	-	CCDS49289.1	1	113	0	2.33	1.5	55.4	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000074874	Ctla2b	ENSMUST00000171347	ENSMUSP00000131083	TRANSLATION	protein_coding	-	CCDS49288.1	1	112	0	2.33	1.5	55.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074874	Ctla2b	ENSMUST00000225732	ENSMUSP00000153260	TRANSLATION	nonsense_mediated_decay	start	-	-	59	0	0.98	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022886	Prl2a1	ENSMUST00000023602	ENSMUSP00000023602	TRANSLATION	protein_coding	-	CCDS26407.1	1	228	0	3.4	1.5	218	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000021376	Tpmt	ENSMUST00000154802	ENSMUSP00000121827	TRANSLATION	protein_coding	stop	-	3	182	18	4.83	0	199	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021376	Tpmt	ENSMUST00000136864	ENSMUSP00000120081	TRANSLATION	protein_coding	stop	-	5	188	18	5.16	0	206.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021376	Tpmt	ENSMUST00000124948	ENSMUSP00000115361	TRANSLATION	protein_coding	stop	-	3	93	7	1.75	0	57	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021376	Tpmt	ENSMUST00000021806	ENSMUSP00000021806	TRANSLATION	protein_coding	-	CCDS26488.1	1	240	18	6.82	1.5	270.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021376	Tpmt	ENSMUST00000224970	ENSMUSP00000152893	TRANSLATION	protein_coding	start	-	-	83	0	0	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000021376	Tpmt	ENSMUST00000151509	ENSMUSP00000120564	TRANSLATION	protein_coding	start	-	5	188	18	4	0	175.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021376	Tpmt	ENSMUST00000133100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021376	Tpmt	ENSMUST00000110118	ENSMUSP00000105745	TRANSLATION	protein_coding	-	-	1	205	18	5.82	0	235	0	-4,-5	-	-	13.872	MINOR
ENSMUSG00000038175	Mylip	ENSMUST00000038275	ENSMUSP00000047403	TRANSLATION	protein_coding	-	CCDS36648.1	1	445	8	5.41	11.6	174.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000038175	Mylip	ENSMUST00000222178	ENSMUSP00000152597	TRANSLATION	protein_coding	-	-	1	380	8	3.81	2.5	118.8	0	-4,-7	-	-	11.892	MINOR
ENSMUSG00000078945	Naip2	ENSMUST00000067975	ENSMUSP00000070827	TRANSLATION	protein_coding	-	CCDS26726.1	1	1447	8	6.11	0.5	308.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000078945	Naip2	ENSMUST00000117913	ENSMUSP00000113890	TRANSLATION	protein_coding	-	CCDS26726.1	1	1447	8	6.11	0.5	308.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000078945	Naip2	ENSMUST00000167986	ENSMUSP00000125852	TRANSLATION	protein_coding	-	-	5	1391	8	6.11	0	308.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000069259	Prl6a1	ENSMUST00000091679	ENSMUSP00000089268	TRANSLATION	protein_coding	-	-	5	235	0	3	0	211	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000069259	Prl6a1	ENSMUST00000091680	ENSMUSP00000089269	TRANSLATION	protein_coding	-	CCDS26395.1	1	230	0	3	0.5	211	0	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000071551	Akr1c19	ENSMUST00000118663	ENSMUSP00000112666	TRANSLATION	protein_coding	-	CCDS26221.1	5	323	27	7.75	3.9	214.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000071551	Akr1c19	ENSMUST00000129751	ENSMUSP00000152741	TRANSLATION	protein_coding	start	-	3	61	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071551	Akr1c19	ENSMUST00000081326	ENSMUSP00000080074	TRANSLATION	protein_coding	-	CCDS26221.1	1	323	27	7.75	3.9	214.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021699	Pde4d	ENSMUST00000117420	ENSMUSP00000113610	TRANSLATION	protein_coding	-	-	1	517	6	8.8	7.5	312.3	0	-4,-6	-	-	15	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000134973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021699	Pde4d	ENSMUST00000153234	ENSMUSP00000121592	TRANSLATION	protein_coding	start	-	5	754	6	12.63	0	312.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000122041	ENSMUSP00000113488	TRANSLATION	protein_coding	-	CCDS49359.1	1	747	6	12.63	7.5	312.3	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000021699	Pde4d	ENSMUST00000155459	ENSMUSP00000114945	TRANSLATION	protein_coding	start	-	3	207	5	3.95	0	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000120671	ENSMUSP00000112991	TRANSLATION	protein_coding	-	-	5	803	6	12.63	1.5	312.3	0	-4,-5	-	-	18.231	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000151429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021699	Pde4d	ENSMUST00000120664	ENSMUSP00000113024	TRANSLATION	protein_coding	-	-	1	584	6	10.13	1.2	312.3	0	-4,-5	-	-	13.095	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000079975	ENSMUSP00000078891	TRANSLATION	protein_coding	-	-	1	698	6	12.63	4.8	312.3	0	-4,-7	-	-	19.755	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000133929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021699	Pde4d	ENSMUST00000074103	ENSMUSP00000073742	TRANSLATION	protein_coding	-	-	1	678	6	12.63	7.5	312.3	0	-4,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000021699	Pde4d	ENSMUST00000119507	ENSMUSP00000114089	TRANSLATION	protein_coding	-	-	5	703	6	12.63	0.5	312.3	0	-4,-5	-	-	18	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000129374	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021699	Pde4d	ENSMUST00000151111	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021699	Pde4d	ENSMUST00000152630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021699	Pde4d	ENSMUST00000135275	ENSMUSP00000119583	TRANSLATION	protein_coding	start	-	5	700	6	12.63	0	312.3	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000119672	ENSMUSP00000113567	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000117879	ENSMUSP00000112774	TRANSLATION	protein_coding	-	-	1	504	6	8.8	6.3	312.3	0	-4,-2	-	-	14.445	MINOR
ENSMUSG00000021699	Pde4d	ENSMUST00000138938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021699	Pde4d	ENSMUST00000177907	ENSMUSP00000136485	TRANSLATION	protein_coding	-	CCDS49359.1	1	747	6	12.63	7.5	312.3	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000079049	Serpinb1c	ENSMUST00000221019	ENSMUSP00000152644	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079049	Serpinb1c	ENSMUST00000021834	ENSMUSP00000021834	TRANSLATION	protein_coding	-	CCDS26429.1	5	375	0	6.66	1.5	424.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021647	Cartpt	ENSMUST00000224142	ENSMUSP00000152981	TRANSLATION	protein_coding	-	-	-	116	0	1.45	5.1	133.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000021647	Cartpt	ENSMUST00000022150	ENSMUSP00000022150	TRANSLATION	protein_coding	-	CCDS36763.1	1	129	0	1.45	1.5	122.6	0	4,-1	-	-	11.614	MINOR
ENSMUSG00000094379	Vmn1r202	ENSMUST00000228020	ENSMUSP00000154314	TRANSLATION	protein_coding	-	CCDS26320.1	-	302	0	0	0.5	144.6	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094379	Vmn1r202	ENSMUST00000078642	ENSMUSP00000077711	TRANSLATION	protein_coding	-	CCDS26320.1	-	302	0	0	0.5	144.6	5	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046876	Atxn1	ENSMUST00000091628	ENSMUSP00000089217	TRANSLATION	protein_coding	-	CCDS26483.1	1	791	0	1	1.5	182	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046876	Atxn1	ENSMUST00000222943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046876	Atxn1	ENSMUST00000180110	ENSMUSP00000137439	TRANSLATION	protein_coding	-	CCDS56877.1	1	799	0	0.835	0.5	176.7	0	-4,-5	-	-	10.692	MINOR
ENSMUSG00000046876	Atxn1	ENSMUST00000222610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046876	Atxn1	ENSMUST00000167708	ENSMUSP00000129890	TRANSLATION	protein_coding	-	CCDS26483.1	1	791	0	1	1.5	182	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046876	Atxn1	ENSMUST00000221082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055679	Ctsr	ENSMUST00000021889	ENSMUSP00000021889	TRANSLATION	protein_coding	-	CCDS26585.1	1	334	4	6.6	1.5	297.6	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000041995	Zbed3	ENSMUST00000222456	ENSMUSP00000152059	TRANSLATION	protein_coding	stop	-	2	152	4	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041995	Zbed3	ENSMUST00000221807	ENSMUSP00000152153	TRANSLATION	protein_coding	-	CCDS26696.1	1	228	4	0.6	0.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000041995	Zbed3	ENSMUST00000045909	ENSMUSP00000044774	TRANSLATION	protein_coding	-	CCDS26696.1	1	228	4	0.6	0.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000114470	Gm49395	ENSMUST00000224997	ENSMUSP00000153073	TRANSLATION	protein_coding,RT	-	-	-	57	0	0	0	0	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000114470	Gm49395	ENSMUST00000225486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114470	Gm49395	ENSMUST00000225093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114470	Gm49395	ENSMUST00000224495	ENSMUSP00000152908	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	57	0	0	0	0	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000069265	H3c1	ENSMUST00000091701	ENSMUSP00000089293	TRANSLATION	protein_coding	-	CCDS26368.1	-	136	0	1	11.7	183.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021509	Slc25a48	ENSMUST00000021971	ENSMUSP00000021971	TRANSLATION	protein_coding	-	CCDS26561.1	1	306	8	2.98	1.5	197.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000098905	Zfp953	ENSMUST00000081582	ENSMUSP00000076700	TRANSLATION	protein_coding,RT	-	CCDS49301.1	1	304	32	1.2	0.5	169.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000021302	Ggps1	ENSMUST00000221953	ENSMUSP00000152753	TRANSLATION	protein_coding	stop	-	3	116	13	2.5	0	97	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000222164	ENSMUSP00000152428	TRANSLATION	nonsense_mediated_decay	-	-	1	236	25	5.726	0.5	213.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000221406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021302	Ggps1	ENSMUST00000223174	ENSMUSP00000152645	TRANSLATION	protein_coding	stop	-	2	181	20	4.41	0	153.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000221713	ENSMUSP00000152305	TRANSLATION	protein_coding	-	-	3	26	0	0.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000221338	ENSMUSP00000152649	TRANSLATION	protein_coding	stop	-	3	126	15	2.83	0	107.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000223329	ENSMUSP00000152754	TRANSLATION	protein_coding	start	-	3	101	9	2.566	0	84.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000170957	ENSMUSP00000126603	TRANSLATION	protein_coding	-	CCDS26248.1	1	300	25	6.66	13.5	222.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021302	Ggps1	ENSMUST00000222687	ENSMUSP00000152355	TRANSLATION	protein_coding	stop	-	2	155	19	3.66	0	154.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000222747	ENSMUSP00000152789	TRANSLATION	nonsense_mediated_decay	-	-	5	236	25	5.726	0.5	213.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021302	Ggps1	ENSMUST00000223090	ENSMUSP00000152512	TRANSLATION	nonsense_mediated_decay	start	-	2	106	13	2.16	0	106.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021536	Adcy2	ENSMUST00000022013	ENSMUSP00000022013	TRANSLATION	protein_coding	-	CCDS36721.1	1	1095	7	9.6	5.3	639.8	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000021583	Erap1	ENSMUST00000220594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021583	Erap1	ENSMUST00000221606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021583	Erap1	ENSMUST00000169114	ENSMUSP00000133166	TRANSLATION	protein_coding	-	CCDS26647.1	1	930	16	19.5	1.5	527.3	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021583	Erap1	ENSMUST00000221526	ENSMUSP00000152462	TRANSLATION	protein_coding	stop	-	2	78	0	1	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000021583	Erap1	ENSMUST00000221822	ENSMUSP00000152705	TRANSLATION	protein_coding	stop	-	3	95	0	2.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021583	Erap1	ENSMUST00000222127	ENSMUSP00000152076	TRANSLATION	protein_coding	start/stop	-	3	220	1	5	0	74.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078926	Cdc20b	ENSMUST00000181117	ENSMUSP00000137915	TRANSLATION	protein_coding	-	-	5	515	0	6.4	0.5	61.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000078926	Cdc20b	ENSMUST00000181741	ENSMUSP00000137759	TRANSLATION	protein_coding	start	-	3	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000078926	Cdc20b	ENSMUST00000109244	ENSMUSP00000104867	TRANSLATION	protein_coding	-	CCDS59591.1	5	519	0	6.4	0.5	60.4	0	-4,-7	-	-	11.892	PRINCIPAL:2
ENSMUSG00000078926	Cdc20b	ENSMUST00000181568	ENSMUSP00000137849	TRANSLATION	protein_coding	-	-	5	477	0	5.4	0	60.4	0	-4,-7	-	-	9.894	MINOR
ENSMUSG00000078926	Cdc20b	ENSMUST00000180543	ENSMUSP00000137651	TRANSLATION	protein_coding	start	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069301	H2ac11	ENSMUST00000091741	ENSMUSP00000089335	TRANSLATION	protein_coding	-	CCDS26307.1	-	130	0	1	7.5	135.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000099517	H3c8	ENSMUST00000080859	ENSMUSP00000079670	TRANSLATION	protein_coding	-	CCDS26342.1	-	136	0	1	11.7	183.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021508	Cxcl14	ENSMUST00000021970	ENSMUSP00000021970	TRANSLATION	protein_coding	-	CCDS36679.1	1	99	0	2	3.7	23.7	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000021508	Cxcl14	ENSMUST00000224801	ENSMUSP00000153440	TRANSLATION	protein_coding	-	-	-	61	0	1	0	0	0	3,-2	-	-	3	MINOR
ENSMUSG00000071252	2210408I21Rik	ENSMUST00000225605	ENSMUSP00000153096	TRANSLATION	protein_coding	-	-	-	324	0	0	2.9	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000071252	2210408I21Rik	ENSMUST00000168779	ENSMUSP00000127449	TRANSLATION	protein_coding	-	CCDS49316.1	1	1272	0	0	1.5	455.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071252	2210408I21Rik	ENSMUST00000225960	ENSMUSP00000153525	TRANSLATION	nonsense_mediated_decay	-	-	-	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071252	2210408I21Rik	ENSMUST00000225760	ENSMUSP00000153269	TRANSLATION	protein_coding	start/stop	-	-	198	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071252	2210408I21Rik	ENSMUST00000225992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091311	Spata31d1b	ENSMUST00000165133	ENSMUSP00000130813	TRANSLATION	protein_coding	-	CCDS49285.1	1	1361	0	0	0.5	391.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021549	Rasa1	ENSMUST00000149799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000148014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000153231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000152466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000141879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000146792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000142285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000109552	ENSMUSP00000105179	TRANSLATION	protein_coding	-	CCDS26667.2	1	1038	0	16.5	1.5	358.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021549	Rasa1	ENSMUST00000132711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021549	Rasa1	ENSMUST00000223598	ENSMUSP00000153378	TRANSLATION	protein_coding	start	-	-	497	0	9.61	0	115.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000132415	ENSMUSP00000120733	TRANSLATION	protein_coding	stop	-	1	162	0	3.34	0	111.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000126785	ENSMUSP00000118697	TRANSLATION	protein_coding	-	CCDS70460.1	3	250	0	5.16	0.5	177	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000074895	Eif4e1b	ENSMUST00000132728	ENSMUSP00000123294	TRANSLATION	protein_coding	-	CCDS49269.1	1	244	0	5.16	0.5	177	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000074895	Eif4e1b	ENSMUST00000141398	ENSMUSP00000114217	TRANSLATION	protein_coding	stop	-	1	103	0	3.41	0	60.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000126525	ENSMUSP00000121625	TRANSLATION	nonsense_mediated_decay	-	-	1	156	0	1.51	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000132005	ENSMUSP00000116681	TRANSLATION	protein_coding	-	CCDS70459.1	2	188	0	3.028	0.5	110.7	0	-4,-5	-	-	3.756	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000139184	ENSMUSP00000119305	TRANSLATION	protein_coding	stop	-	1	134	0	2.08	0	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000152204	ENSMUSP00000120619	TRANSLATION	protein_coding	-	CCDS49270.1	1	183	0	3.028	0.5	110.7	0	-4,-5	-	-	3.756	MINOR
ENSMUSG00000074895	Eif4e1b	ENSMUST00000110003	ENSMUSP00000105630	TRANSLATION	protein_coding	-	CCDS49269.1	2	244	0	5.16	0.5	177	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000074895	Eif4e1b	ENSMUST00000142158	ENSMUSP00000117092	TRANSLATION	protein_coding	stop	-	2	243	0	5.16	0	177	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038415	Foxq1	ENSMUST00000042118	ENSMUSP00000036952	TRANSLATION	protein_coding	-	CCDS26423.1	-	400	0	0.6	1.5	103	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090659	Zfp493	ENSMUST00000223540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090659	Zfp493	ENSMUST00000164936	ENSMUSP00000132282	TRANSLATION	protein_coding	-	CCDS49304.1	1	384	44	2.8	0.5	268.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090659	Zfp493	ENSMUST00000181319	ENSMUSP00000137936	TRANSLATION	protein_coding	-	-	1	110	0	1	0	76.6	0	-4,-5	-	-	2.142	MINOR
ENSMUSG00000090659	Zfp493	ENSMUST00000220570	ENSMUSP00000152847	TRANSLATION	protein_coding	stop	-	3	85	6	2	0	99.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090659	Zfp493	ENSMUST00000180507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021728	Emb	ENSMUST00000224821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021728	Emb	ENSMUST00000225981	ENSMUSP00000153512	TRANSLATION	protein_coding	stop	-	-	101	2	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021728	Emb	ENSMUST00000022242	ENSMUSP00000022242	TRANSLATION	protein_coding	-	CCDS26791.1	1	330	0	2.992	1.5	31.3	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021728	Emb	ENSMUST00000225460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021728	Emb	ENSMUST00000224455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021728	Emb	ENSMUST00000225648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049902	4921517D22Rik	ENSMUST00000225373	ENSMUSP00000153380	TRANSLATION	nonsense_mediated_decay	-	-	-	125	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000049902	4921517D22Rik	ENSMUST00000061597	ENSMUSP00000061773	TRANSLATION	protein_coding	-	CCDS36688.1	1	269	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000095821	Tcstv3	ENSMUST00000178349	ENSMUSP00000137396	TRANSLATION	protein_coding	-	CCDS56911.1	-	169	0	0	0.5	307.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095821	Tcstv3	ENSMUST00000223967	ENSMUSP00000153496	TRANSLATION	protein_coding	-	CCDS56911.1	-	169	0	0	0.5	307.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021486	Prelid1	ENSMUST00000021942	ENSMUSP00000021942	TRANSLATION	protein_coding	-	CCDS26542.1	1	217	0	2.65	9.3	195.8	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021486	Prelid1	ENSMUST00000224220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056222	Spock1	ENSMUST00000186271	ENSMUSP00000140755	TRANSLATION	protein_coding	-	CCDS49279.1	1	439	6	2.18	6.3	223.8	0	1,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000056222	Spock1	ENSMUST00000185905	ENSMUSP00000153001	TRANSLATION	protein_coding	-	-	1	343	6	1.18	0	158	0	1,-2	-	-	11.298	MINOR
ENSMUSG00000056222	Spock1	ENSMUST00000172326	ENSMUSP00000128840	TRANSLATION	protein_coding	-	CCDS49279.1	5	439	6	2.18	6.3	223.8	0	1,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000056222	Spock1	ENSMUST00000185502	ENSMUSP00000140409	TRANSLATION	protein_coding	-	CCDS79195.1	5	442	6	2.18	5.3	223.8	0	1,-2	-	-	19.622	ALTERNATIVE:1
ENSMUSG00000056222	Spock1	ENSMUST00000189373	ENSMUSP00000139863	TRANSLATION	protein_coding	-	CCDS79194.1	5	367	6	1.18	0.5	158	0	1,-2	-	-	11.298	MINOR
ENSMUSG00000056222	Spock1	ENSMUST00000187852	ENSMUSP00000141130	TRANSLATION	protein_coding	-	CCDS79193.1	1	364	6	1.18	0.5	158	0	1,-2	-	-	11.298	MINOR
ENSMUSG00000071522	Olfr263	ENSMUST00000215804	ENSMUSP00000149892	TRANSLATION	protein_coding	-	CCDS26268.1	5	317	0	0.36	3.9	157.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000071522	Olfr263	ENSMUST00000096006	ENSMUSP00000093705	TRANSLATION	protein_coding	-	CCDS26268.1	-	317	0	0.36	3.9	157.6	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000074849	Spata31d1c	ENSMUST00000099427	ENSMUSP00000097024	TRANSLATION	protein_coding	-	CCDS49293.1	1	853	0	0	0.5	498.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037933	Bicd2	ENSMUST00000048544	ENSMUSP00000039394	TRANSLATION	protein_coding	-	CCDS36657.1	1	851	0	2.5	1.5	1224.1	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000037933	Bicd2	ENSMUST00000220723	ENSMUSP00000152090	TRANSLATION	protein_coding	start	-	5	87	0	1	0	56.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037933	Bicd2	ENSMUST00000110084	ENSMUSP00000105711	TRANSLATION	protein_coding	-	CCDS49261.1	1	746	0	2.5	0.5	1224.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000037933	Bicd2	ENSMUST00000110085	ENSMUSP00000105712	TRANSLATION	protein_coding	-	CCDS36656.1	1	820	0	2.5	1.5	1224.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000094796	BC147527	ENSMUST00000081558	ENSMUSP00000111141	TRANSLATION	protein_coding	-	CCDS56910.1	-	167	0	0	0.5	291.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094796	BC147527	ENSMUST00000225029	ENSMUSP00000153422	TRANSLATION	protein_coding	-	CCDS56910.1	-	167	0	0	0.5	291.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000108426	Olfr465-ps1	ENSMUST00000206324	ENSMUSP00000146183	TRANSLATION	protein_coding	-	-	5	315	0	0.36	1	131.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038327	Serpinb9f	ENSMUST00000075515	ENSMUSP00000074958	TRANSLATION	protein_coding	-	CCDS26436.1	1	377	0	6	0.5	419.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053181	A830005F24Rik	ENSMUST00000065465	ENSMUSP00000069912	TRANSLATION	protein_coding	-	-	1	167	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000060678	H4c3	ENSMUST00000102967	ENSMUSP00000100032	TRANSLATION	protein_coding	-	CCDS26359.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060738	Prl7c1	ENSMUST00000072943	ENSMUSP00000072712	TRANSLATION	protein_coding	-	CCDS26406.1	1	251	0	3.4	1.5	194.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000021413	Prpf4b	ENSMUST00000222509	ENSMUSP00000152654	TRANSLATION	nonsense_mediated_decay	-	-	2	1007	4	7.9828	3.9	169.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021413	Prpf4b	ENSMUST00000221077	ENSMUSP00000152545	TRANSLATION	nonsense_mediated_decay	start	-	3	70	3	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021413	Prpf4b	ENSMUST00000222834	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021413	Prpf4b	ENSMUST00000221784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021413	Prpf4b	ENSMUST00000077853	ENSMUSP00000077019	TRANSLATION	protein_coding	-	CCDS26448.1	1	1007	4	7.9828	3.9	169.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000021413	Prpf4b	ENSMUST00000220965	ENSMUSP00000152349	TRANSLATION	nonsense_mediated_decay	start	-	2	393	4	5.4728	0	103.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021413	Prpf4b	ENSMUST00000221087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021413	Prpf4b	ENSMUST00000221639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021413	Prpf4b	ENSMUST00000223228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021413	Prpf4b	ENSMUST00000221156	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000084136	Vmn1r207	ENSMUST00000119931	ENSMUSP00000158190	TRANSLATION	protein_coding	-	-	-	312	0	0	0.5	116.8	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084136	Vmn1r207	ENSMUST00000237024	ENSMUSP00000157896	TRANSLATION	protein_coding	-	-	-	312	0	0	0.5	116.8	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084136	Vmn1r207	ENSMUST00000236800	ENSMUSP00000157931	TRANSLATION	protein_coding	-	-	-	312	0	0	0.5	116.8	4	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021680	Crhbp	ENSMUST00000045583	ENSMUSP00000042578	TRANSLATION	protein_coding	-	-	1	329	0	0	0	576.6	0	0,-3	-	-	5.544	MINOR
ENSMUSG00000021680	Crhbp	ENSMUST00000221025	ENSMUSP00000152083	TRANSLATION	protein_coding	-	CCDS26698.1	1	322	0	0	9.5	584.2	0	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000021756	Il6st	ENSMUST00000183663	ENSMUSP00000138836	TRANSLATION	protein_coding	-	CCDS26773.1	1	917	4	11.71	1.5	200.4	1	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021756	Il6st	ENSMUST00000183868	ENSMUSP00000139180	TRANSLATION	protein_coding	stop	-	5	45	0	0.75	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000183829	ENSMUSP00000138987	TRANSLATION	protein_coding	-	-	5	203	4	3.23	0	67.4	0	3,-2	-	-	4	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000184276	ENSMUSP00000139060	TRANSLATION	nonsense_mediated_decay	-	-	5	346	4	5.88	0	166.1	0	3,-2	-	-	-1	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000184949	ENSMUSP00000138915	TRANSLATION	protein_coding	-	-	5	856	4	10.71	0	200.4	1	3,-2	-	-	14.002	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000184311	ENSMUSP00000139227	TRANSLATION	protein_coding	-	CCDS26773.1	5	917	4	11.71	1.5	200.4	1	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021756	Il6st	ENSMUST00000184445	ENSMUSP00000139311	TRANSLATION	protein_coding	-	-	5	327	4	5.88	0	166.1	0	3,-2	-	-	7.942	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000183513	ENSMUSP00000139016	TRANSLATION	protein_coding	-	-	5	66	0	0.15	0	0	0	3,-1	-	-	0	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000183886	ENSMUSP00000138820	TRANSLATION	protein_coding	-	-	1	164	0	3.08	0	100.6	0	3,-2	-	-	0.012	MINOR
ENSMUSG00000021756	Il6st	ENSMUST00000070731	ENSMUSP00000064205	TRANSLATION	protein_coding	-	CCDS26773.1	5	917	4	11.71	1.5	200.4	1	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021643	Serf1	ENSMUST00000152286	ENSMUSP00000119193	TRANSLATION	protein_coding	-	-	3	48	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021643	Serf1	ENSMUST00000151821	ENSMUSP00000119853	TRANSLATION	protein_coding	-	-	2	48	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021643	Serf1	ENSMUST00000129014	ENSMUSP00000121421	TRANSLATION	protein_coding	-	CCDS36765.1	3	62	0	0	10.5	46.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021643	Serf1	ENSMUST00000132053	ENSMUSP00000121609	TRANSLATION	protein_coding	-	-	1	39	0	0	0	46.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000021643	Serf1	ENSMUST00000022145	ENSMUSP00000022145	TRANSLATION	protein_coding	-	CCDS36765.1	1	62	0	0	10.5	46.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039109	F13a1	ENSMUST00000225168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039109	F13a1	ENSMUST00000224446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039109	F13a1	ENSMUST00000164727	ENSMUSP00000128316	TRANSLATION	protein_coding	-	CCDS26456.1	1	732	11	13.75	5.1	322.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000039109	F13a1	ENSMUST00000037491	ENSMUSP00000048667	TRANSLATION	protein_coding	-	CCDS26456.1	1	732	11	13.75	5.1	322.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000039109	F13a1	ENSMUST00000224783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021408	Ripk1	ENSMUST00000163418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021408	Ripk1	ENSMUST00000171137	ENSMUSP00000128511	TRANSLATION	protein_coding	start	-	5	597	0	5.55	0	227	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021408	Ripk1	ENSMUST00000167374	ENSMUSP00000129831	TRANSLATION	protein_coding	-	CCDS26443.1	1	656	0	7.05	0.5	279.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021408	Ripk1	ENSMUST00000021844	ENSMUSP00000021844	TRANSLATION	protein_coding	-	CCDS26443.1	1	656	0	7.05	0.5	279.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021408	Ripk1	ENSMUST00000222176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061376	Vmn1r219	ENSMUST00000226845	ENSMUSP00000154796	TRANSLATION	protein_coding	-	CCDS26334.1	-	312	0	0	0.5	106.8	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061376	Vmn1r219	ENSMUST00000076180	ENSMUSP00000075537	TRANSLATION	protein_coding	-	CCDS26334.1	-	312	0	0	0.5	106.8	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061376	Vmn1r219	ENSMUST00000228666	ENSMUSP00000154240	TRANSLATION	protein_coding	-	CCDS26334.1	-	312	0	0	0.5	106.8	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061376	Vmn1r219	ENSMUST00000228113	ENSMUSP00000154069	TRANSLATION	protein_coding	-	CCDS26334.1	-	312	0	0	0.5	106.8	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061376	Vmn1r219	ENSMUST00000227388	ENSMUSP00000154415	TRANSLATION	protein_coding	-	CCDS26334.1	-	312	0	0	0.5	106.8	5	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021457	Syk	ENSMUST00000118756	ENSMUSP00000112914	TRANSLATION	protein_coding	-	-	1	583	4	10.08	0	426	0	-4,-5	-	-	12.148	MINOR
ENSMUSG00000021457	Syk	ENSMUST00000055087	ENSMUSP00000060828	TRANSLATION	protein_coding	-	CCDS26517.1	1	629	4	11.58	1.5	440.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021457	Syk	ENSMUST00000140339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021457	Syk	ENSMUST00000150672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021457	Syk	ENSMUST00000120135	ENSMUSP00000113852	TRANSLATION	protein_coding	-	CCDS26517.1	1	629	4	11.58	1.5	440.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021608	Lpcat1	ENSMUST00000140431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021608	Lpcat1	ENSMUST00000022099	ENSMUSP00000022099	TRANSLATION	protein_coding	-	CCDS36726.1	1	534	9	2.2	3.9	102.7	0	-3,1	-	-	19	PRINCIPAL:2
ENSMUSG00000021608	Lpcat1	ENSMUST00000133791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021608	Lpcat1	ENSMUST00000123766	ENSMUSP00000117965	TRANSLATION	nonsense_mediated_decay	-	-	5	77	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021608	Lpcat1	ENSMUST00000147566	ENSMUSP00000117238	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021608	Lpcat1	ENSMUST00000223060	ENSMUSP00000152190	TRANSLATION	protein_coding	-	-	1	486	9	2.2	3.6	102.7	0	3,-2	-	-	18.897	ALTERNATIVE:2
ENSMUSG00000021608	Lpcat1	ENSMUST00000124627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021608	Lpcat1	ENSMUST00000222881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021701	Plk2	ENSMUST00000225340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021701	Plk2	ENSMUST00000224489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021701	Plk2	ENSMUST00000223756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021701	Plk2	ENSMUST00000225156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021701	Plk2	ENSMUST00000022212	ENSMUSP00000022212	TRANSLATION	protein_coding	-	CCDS26767.1	1	682	19	11.95	5.1	352.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000098799	Trgj4	ENSMUST00000184430	ENSMUSP00000143068	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021719	Rgs7bp	ENSMUST00000063551	ENSMUSP00000066614	TRANSLATION	protein_coding	-	CCDS36774.1	1	257	0	0	7.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000091264	Smim13	ENSMUST00000165561	ENSMUSP00000130956	TRANSLATION	protein_coding	-	CCDS49246.1	1	88	0	0	9.5	73.2	0	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021638	Ocln	ENSMUST00000160859	ENSMUSP00000124849	TRANSLATION	protein_coding	-	CCDS26731.1	1	521	0	3.5	4.1	186.4	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021638	Ocln	ENSMUST00000159515	ENSMUSP00000125595	TRANSLATION	protein_coding	stop	-	5	107	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000021638	Ocln	ENSMUST00000069756	ENSMUSP00000065284	TRANSLATION	protein_coding	-	CCDS26731.1	1	521	0	3.5	4.1	186.4	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021638	Ocln	ENSMUST00000159459	ENSMUSP00000125642	TRANSLATION	protein_coding	-	-	1	272	0	3.5	1.2	92.8	0	-1,-6	-	-	6.449	MINOR
ENSMUSG00000021638	Ocln	ENSMUST00000022140	ENSMUSP00000022140	TRANSLATION	protein_coding	-	CCDS26731.1	1	521	0	3.5	4.1	186.4	4	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000006191	Cdkal1	ENSMUST00000153086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006191	Cdkal1	ENSMUST00000110323	ENSMUSP00000105952	TRANSLATION	protein_coding	start	-	3	80	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000123641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006191	Cdkal1	ENSMUST00000137225	ENSMUSP00000117404	TRANSLATION	nonsense_mediated_decay	-	-	1	218	0	1.68	0	77.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000129231	ENSMUSP00000120432	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	0.6	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000131792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006191	Cdkal1	ENSMUST00000124532	ENSMUSP00000118815	TRANSLATION	protein_coding	stop	-	3	96	0	0.6	0	24.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000154209	ENSMUSP00000121792	TRANSLATION	protein_coding	start	-	2	107	0	1.865	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000006353	ENSMUSP00000006353	TRANSLATION	protein_coding	-	CCDS26412.1	1	578	8	5.77	1.5	171.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000006191	Cdkal1	ENSMUST00000140278	ENSMUSP00000122249	TRANSLATION	nonsense_mediated_decay	-	-	1	520	8	5.77	0	171.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006191	Cdkal1	ENSMUST00000091674	ENSMUSP00000089262	TRANSLATION	protein_coding	-	CCDS84016.1	1	136	0	0.6	0.5	24.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038042	Ptpdc1	ENSMUST00000221887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038042	Ptpdc1	ENSMUST00000035824	ENSMUSP00000047374	TRANSLATION	protein_coding	-	CCDS26495.1	1	747	10	1.58	0.5	44.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000038042	Ptpdc1	ENSMUST00000238995	ENSMUSP00000158961	TRANSLATION	protein_coding	-	-	-	795	10	1.58	0.5	44.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000038042	Ptpdc1	ENSMUST00000223025	ENSMUSP00000152409	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038042	Ptpdc1	ENSMUST00000222028	ENSMUSP00000152771	TRANSLATION	protein_coding	-	-	1	808	10	1.58	0.5	44.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000015396	Cd83	ENSMUST00000221359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015396	Cd83	ENSMUST00000015540	ENSMUSP00000015540	TRANSLATION	protein_coding	-	CCDS26481.1	1	196	0	1.6	0.5	28.3	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000069208	Zfp825	ENSMUST00000202645	ENSMUSP00000144128	TRANSLATION	protein_coding	-	CCDS79212.1	1	274	27	2.75	0.5	191.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000069208	Zfp825	ENSMUST00000221173	ENSMUSP00000152719	TRANSLATION	protein_coding	-	-	3	292	27	2.75	0.5	191.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000069208	Zfp825	ENSMUST00000074369	ENSMUSP00000073973	TRANSLATION	protein_coding	start	-	5	273	27	2.75	0.5	191.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018102	H2bc4	ENSMUST00000018246	ENSMUSP00000018246	TRANSLATION	protein_coding	-	CCDS26357.1	1	126	0	1	7.5	91.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025876	Unc5a	ENSMUST00000026994	ENSMUSP00000026994	TRANSLATION	protein_coding	-	CCDS26537.1	1	898	0	15	7.5	459.1	2	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000025876	Unc5a	ENSMUST00000136852	ENSMUSP00000116585	TRANSLATION	protein_coding	start/stop	-	3	167	0	1.5	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025876	Unc5a	ENSMUST00000109994	ENSMUSP00000105621	TRANSLATION	protein_coding	-	CCDS79188.1	1	842	0	14	7.5	424.2	2	3,-2	-	-	10.908	MINOR
ENSMUSG00000025876	Unc5a	ENSMUST00000142906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025876	Unc5a	ENSMUST00000137967	ENSMUSP00000115531	TRANSLATION	protein_coding	start	-	2	128	0	2	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021609	Slc6a3	ENSMUST00000022100	ENSMUSP00000022100	TRANSLATION	protein_coding	-	CCDS26632.1	1	619	0	11.89	7.3	779.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078941	Ak6	ENSMUST00000190210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078941	Ak6	ENSMUST00000185901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078941	Ak6	ENSMUST00000190729	ENSMUSP00000140648	TRANSLATION	protein_coding	-	-	1	41	7	1.33	0	37.5	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000078941	Ak6	ENSMUST00000022135	ENSMUSP00000022135	TRANSLATION	protein_coding	-	CCDS26734.1	1	172	7	3.83	17.5	105.5	0	-4,-5	-	-	18.022	PRINCIPAL:1
ENSMUSG00000078941	Ak6	ENSMUST00000084721	ENSMUSP00000081772	TRANSLATION	protein_coding	-	CCDS26735.1	1	264	0	0.4	0.5	171.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000101972	H3c11	ENSMUST00000189457	ENSMUSP00000139663	TRANSLATION	protein_coding	-	CCDS26296.1	-	136	0	1	11.7	183.6	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000021371	Mcur1	ENSMUST00000223347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021371	Mcur1	ENSMUST00000223353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021371	Mcur1	ENSMUST00000021800	ENSMUSP00000021800	TRANSLATION	protein_coding	-	CCDS36645.1	1	340	0	0	1.5	184.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000076430	Hus1b	ENSMUST00000102943	ENSMUSP00000100007	TRANSLATION	protein_coding	-	CCDS26421.1	-	276	0	1	1.5	249.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021662	Arhgef28	ENSMUST00000238746	ENSMUSP00000158740	TRANSLATION	protein_coding	-	-	-	1387	9	7.15	1.5	140.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021662	Arhgef28	ENSMUST00000224866	ENSMUSP00000153114	TRANSLATION	protein_coding	stop	-	-	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021662	Arhgef28	ENSMUST00000223849	ENSMUSP00000153000	TRANSLATION	protein_coding	stop	-	-	643	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021662	Arhgef28	ENSMUST00000109426	ENSMUSP00000105053	TRANSLATION	protein_coding	-	CCDS36758.1	1	1700	9	7.15	1.5	140.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021662	Arhgef28	ENSMUST00000225884	ENSMUSP00000153423	TRANSLATION	nonsense_mediated_decay	-	-	-	1324	9	7.15	0	140.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021662	Arhgef28	ENSMUST00000225269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021662	Arhgef28	ENSMUST00000225663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074832	2410141K09Rik	ENSMUST00000172688	ENSMUSP00000153674	TRANSLATION	protein_coding	start	-	1	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074832	2410141K09Rik	ENSMUST00000172579	ENSMUSP00000134352	TRANSLATION	protein_coding	-	CCDS84031.1	3	464	56	2.35	0.5	327.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074832	2410141K09Rik	ENSMUST00000091541	ENSMUSP00000089126	TRANSLATION	protein_coding	-	-	5	95	2	1.75	0.5	76.9	0	-4,-5	-	-	4.47	MINOR
ENSMUSG00000074832	2410141K09Rik	ENSMUST00000173583	ENSMUSP00000134048	TRANSLATION	protein_coding	-	CCDS70474.1	1	95	2	1.75	0.5	76.9	0	-4,-5	-	-	4.47	MINOR
ENSMUSG00000021686	Ap3b1	ENSMUST00000231916	ENSMUSP00000155984	TRANSLATION	protein_coding	start	-	-	484	0	0	0	283.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021686	Ap3b1	ENSMUST00000022196	ENSMUSP00000022196	TRANSLATION	protein_coding	-	CCDS26693.1	1	1105	0	8.44	0.5	839.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021686	Ap3b1	ENSMUST00000221206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021686	Ap3b1	ENSMUST00000222383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021686	Ap3b1	ENSMUST00000220505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021395	Spin1	ENSMUST00000095797	ENSMUSP00000093473	TRANSLATION	protein_coding	-	CCDS26510.1	1	262	0	3.5	19.5	252.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021395	Spin1	ENSMUST00000223152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098781	Gm28044	ENSMUST00000044819	ENSMUSP00000049225	TRANSLATION	nonsense_mediated_decay,RT	-	-	3	119	0	0	0	67.6	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000098781	Gm28044	ENSMUST00000170543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062201	Prl3d3	ENSMUST00000223958	ENSMUSP00000153035	TRANSLATION	protein_coding	-	-	-	224	0	2.8	1.5	233.5	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000062201	Prl3d3	ENSMUST00000073601	ENSMUSP00000073286	TRANSLATION	protein_coding	-	CCDS26391.1	1	223	0	2.8	1.5	233.5	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000076747	Trgv5	ENSMUST00000199017	ENSMUSP00000143714	TRANSLATION	TR_V_gene	stop	-	-	113	0	1.14	0	48.2	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076747	Trgv5	ENSMUST00000103556	ENSMUSP00000100337	TRANSLATION	TR_V_gene	start/stop	-	-	97	0	0.64	0	48.2	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000018259	Prl8a2	ENSMUST00000018403	ENSMUSP00000018403	TRANSLATION	protein_coding	-	CCDS26396.1	1	240	0	2.7848	0.5	162.2	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000018259	Prl8a2	ENSMUST00000223918	ENSMUSP00000153595	TRANSLATION	protein_coding	start	-	-	101	0	1.2	0	36.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018259	Prl8a2	ENSMUST00000110363	ENSMUSP00000105992	TRANSLATION	protein_coding	-	CCDS70440.1	1	239	0	2.7848	1.5	162.2	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000049625	Tifab	ENSMUST00000169652	ENSMUSP00000131162	TRANSLATION	protein_coding	-	CCDS26558.1	1	147	0	0.8	1.5	24.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049625	Tifab	ENSMUST00000225063	ENSMUSP00000152976	TRANSLATION	protein_coding	-	CCDS26558.1	-	147	0	0.8	1.5	24.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021575	Ahrr	ENSMUST00000137538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021575	Ahrr	ENSMUST00000123058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021575	Ahrr	ENSMUST00000022059	ENSMUSP00000022059	TRANSLATION	protein_coding	-	CCDS26641.1	1	701	0	4.78	1.5	62	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021575	Ahrr	ENSMUST00000148438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021575	Ahrr	ENSMUST00000222032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021575	Ahrr	ENSMUST00000222649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021575	Ahrr	ENSMUST00000109640	ENSMUSP00000105268	TRANSLATION	protein_coding	-	CCDS84037.1	1	573	0	2.8	0.5	0	0	-4,-6	-	-	2.04	MINOR
ENSMUSG00000078958	Atp6ap1l	ENSMUST00000183162	ENSMUSP00000138517	TRANSLATION	protein_coding	start	-	5	144	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078958	Atp6ap1l	ENSMUST00000182446	ENSMUSP00000138791	TRANSLATION	nonsense_mediated_decay	-	-	5	35	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000078958	Atp6ap1l	ENSMUST00000109541	ENSMUSP00000105168	TRANSLATION	protein_coding	-	CCDS49325.1	1	336	0	0	1.5	126.1	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000078958	Atp6ap1l	ENSMUST00000182932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078958	Atp6ap1l	ENSMUST00000182104	ENSMUSP00000138331	TRANSLATION	protein_coding	start	-	5	87	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061482	H4c4	ENSMUST00000102968	ENSMUSP00000100033	TRANSLATION	protein_coding	-	CCDS26353.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021537	Cetn3	ENSMUST00000224574	ENSMUSP00000153229	TRANSLATION	protein_coding	stop	-	-	97	11	2.33	2	35.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000223858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021537	Cetn3	ENSMUST00000224168	ENSMUSP00000152896	TRANSLATION	protein_coding	start	-	-	87	9	1	0	42	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000224705	ENSMUSP00000153322	TRANSLATION	protein_coding	start	-	-	137	18	3.311	0	82.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000226007	ENSMUSP00000153539	TRANSLATION	protein_coding	stop	-	-	100	14	2.33	2	41.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000223793	ENSMUSP00000153541	TRANSLATION	protein_coding	stop	-	-	100	14	2.33	2	41.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000224433	ENSMUSP00000153163	TRANSLATION	nonsense_mediated_decay	-	-	-	62	5	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021537	Cetn3	ENSMUST00000022009	ENSMUSP00000022009	TRANSLATION	protein_coding	-	CCDS26663.1	1	167	20	4.444	15.5	95.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000021690	Jmy	ENSMUST00000065537	ENSMUSP00000070339	TRANSLATION	protein_coding	-	CCDS26688.1	1	983	0	0	0.5	659.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021690	Jmy	ENSMUST00000220513	ENSMUSP00000152402	TRANSLATION	protein_coding	-	-	1	446	0	0	0	453	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034525	Ice1	ENSMUST00000223102	ENSMUSP00000152065	TRANSLATION	protein_coding	start	-	3	117	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034525	Ice1	ENSMUST00000222568	ENSMUSP00000152787	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034525	Ice1	ENSMUST00000043493	ENSMUSP00000036482	TRANSLATION	protein_coding	-	CCDS49309.1	5	2241	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000034525	Ice1	ENSMUST00000222627	ENSMUSP00000152729	TRANSLATION	nonsense_mediated_decay	start	-	3	29	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034525	Ice1	ENSMUST00000222274	ENSMUSP00000152860	TRANSLATION	nonsense_mediated_decay	start	-	3	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034525	Ice1	ENSMUST00000222738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034525	Ice1	ENSMUST00000220637	ENSMUSP00000152818	TRANSLATION	nonsense_mediated_decay	start	-	1	130	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021579	Lrrc14b	ENSMUST00000022064	ENSMUSP00000022064	TRANSLATION	protein_coding	-	CCDS26645.1	1	510	0	0	2.7	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000038991	Txndc5	ENSMUST00000162075	ENSMUSP00000124516	TRANSLATION	protein_coding	-	CCDS79178.1	1	323	8	8.5	1.7	244	0	-4,-5	-	-	9.36	MINOR
ENSMUSG00000038991	Txndc5	ENSMUST00000160046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038991	Txndc5	ENSMUST00000160653	ENSMUSP00000124401	TRANSLATION	protein_coding	-	CCDS79179.1	1	344	12	9.25	0.5	270.7	0	-4,-5	-	-	15.126	MINOR
ENSMUSG00000038991	Txndc5	ENSMUST00000035988	ENSMUSP00000041839	TRANSLATION	protein_coding	-	CCDS26463.1	1	417	12	10.05	1.5	291.9	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021548	Ccnh	ENSMUST00000163713	ENSMUSP00000130820	TRANSLATION	protein_coding	start	-	2	121	0	3.33	0	48.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021548	Ccnh	ENSMUST00000163600	ENSMUSP00000129349	TRANSLATION	protein_coding	-	CCDS84047.1	5	287	0	7.58	0.5	35.5	0	-4,-7	-	-	4.638	MINOR
ENSMUSG00000021548	Ccnh	ENSMUST00000164127	ENSMUSP00000131136	TRANSLATION	protein_coding	-	-	1	327	0	8.16	0	122.2	0	-4,-7	-	-	10.998	MINOR
ENSMUSG00000021548	Ccnh	ENSMUST00000166932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021548	Ccnh	ENSMUST00000172029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021548	Ccnh	ENSMUST00000165077	ENSMUSP00000130839	TRANSLATION	protein_coding	stop	-	1	142	0	3.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021548	Ccnh	ENSMUST00000022030	ENSMUSP00000022030	TRANSLATION	protein_coding	-	CCDS26666.1	1	323	0	8.66	10.8	122.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039182	AW209491	ENSMUST00000178289	ENSMUSP00000136376	TRANSLATION	protein_coding	-	CCDS26250.1	1	421	0	0	7.5	384.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039182	AW209491	ENSMUST00000038690	ENSMUSP00000041523	TRANSLATION	protein_coding	-	CCDS26250.1	1	421	0	0	7.5	384.4	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000039182	AW209491	ENSMUST00000222052	ENSMUSP00000152180	TRANSLATION	protein_coding	stop	-	2	117	0	0	0	74.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055298	Ctsj	ENSMUST00000224224	ENSMUSP00000153389	TRANSLATION	protein_coding	-	-	-	334	4	6.6	1.5	312.6	0	3,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000055298	Ctsj	ENSMUST00000071526	ENSMUSP00000071457	TRANSLATION	protein_coding	-	CCDS49291.1	1	333	4	6.6	1.5	308.9	0	4,-1	-	-	15.778	PRINCIPAL:2
ENSMUSG00000055298	Ctsj	ENSMUST00000224306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042102	Dmgdh	ENSMUST00000126196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042102	Dmgdh	ENSMUST00000048001	ENSMUSP00000039663	TRANSLATION	protein_coding	-	CCDS26690.1	1	869	34	15.5	0.5	570.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000064288	H4c12	ENSMUST00000102983	ENSMUSP00000100048	TRANSLATION	protein_coding	-	CCDS26292.1	-	103	0	1	9.6	34.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071491	Vmn1r209	ENSMUST00000227265	ENSMUSP00000153997	TRANSLATION	protein_coding	-	CCDS36617.1	-	312	0	0	0.5	119.9	3	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071491	Vmn1r209	ENSMUST00000095961	ENSMUSP00000093657	TRANSLATION	protein_coding	-	CCDS36617.1	-	312	0	0	0.5	119.9	3	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071491	Vmn1r209	ENSMUST00000227038	ENSMUSP00000154503	TRANSLATION	protein_coding	-	CCDS36617.1	-	312	0	0	0.5	119.9	3	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055480	Zfp458	ENSMUST00000223990	ENSMUSP00000153563	TRANSLATION	protein_coding	stop	-	-	205	15	2.4	0	146	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055480	Zfp458	ENSMUST00000045969	ENSMUSP00000047222	TRANSLATION	protein_coding	-	CCDS36710.1	1	752	83	2.2	1.5	377.7	0	-4,-7	-	-	17.502	PRINCIPAL:2
ENSMUSG00000055480	Zfp458	ENSMUST00000225772	ENSMUSP00000153284	TRANSLATION	protein_coding	-	-	-	749	83	2.2	1.5	377.7	0	-4,-7	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000055480	Zfp458	ENSMUST00000224648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021303	Gng4	ENSMUST00000138783	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021303	Gng4	ENSMUST00000220727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021303	Gng4	ENSMUST00000021734	ENSMUSP00000021734	TRANSLATION	protein_coding	-	CCDS36598.1	1	75	0	2	17.5	58.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021541	Trpc7	ENSMUST00000174457	ENSMUSP00000133305	TRANSLATION	protein_coding	-	-	5	807	0	1.04	0	233.6	8	-4,-2	-	-	12	MINOR
ENSMUSG00000021541	Trpc7	ENSMUST00000173513	ENSMUSP00000134662	TRANSLATION	protein_coding	start	-	5	746	0	1.04	1.2	233.6	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000021541	Trpc7	ENSMUST00000022023	ENSMUSP00000022023	TRANSLATION	protein_coding	-	CCDS26566.1	1	862	0	1.04	5.1	233.6	9	-4,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000021541	Trpc7	ENSMUST00000109871	ENSMUSP00000105497	TRANSLATION	protein_coding	-	CCDS79192.1	1	861	0	1.04	5.1	233.6	9	-4,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000021541	Trpc7	ENSMUST00000173817	ENSMUSP00000133411	TRANSLATION	protein_coding	-	-	5	801	0	1.04	1.2	233.6	9	-4,-2	-	-	12.098	MINOR
ENSMUSG00000021541	Trpc7	ENSMUST00000173466	ENSMUSP00000134285	TRANSLATION	nonsense_mediated_decay	start	-	5	380	0	0.36	0	120.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000021541	Trpc7	ENSMUST00000173067	ENSMUSP00000134481	TRANSLATION	nonsense_mediated_decay	start	-	5	261	0	0.36	0	120.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021541	Trpc7	ENSMUST00000151918	ENSMUSP00000119809	TRANSLATION	nonsense_mediated_decay	-	-	1	451	0	0.36	0	120.8	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000021720	Rnf180	ENSMUST00000069686	ENSMUSP00000064624	TRANSLATION	protein_coding	-	CCDS36775.1	5	575	13	0.74	0.5	31.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021720	Rnf180	ENSMUST00000224749	ENSMUSP00000153051	TRANSLATION	protein_coding	stop	-	-	317	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021720	Rnf180	ENSMUST00000224011	ENSMUSP00000153678	TRANSLATION	protein_coding	-	CCDS36775.1	-	575	13	0.74	0.5	31.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021720	Rnf180	ENSMUST00000226044	ENSMUSP00000153478	TRANSLATION	protein_coding	-	-	-	591	13	0.74	0.5	31.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021720	Rnf180	ENSMUST00000224662	ENSMUSP00000153506	TRANSLATION	protein_coding	-	-	-	592	13	0.74	0.5	31.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025868	Higd2a	ENSMUST00000026986	ENSMUSP00000026986	TRANSLATION	protein_coding	-	CCDS26532.1	1	106	0	1.4	7.5	82	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049806	Olfr466	ENSMUST00000058907	ENSMUSP00000062692	TRANSLATION	protein_coding	-	CCDS26604.1	-	308	0	0	2.8	158	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049806	Olfr466	ENSMUST00000214214	ENSMUSP00000149328	TRANSLATION	protein_coding	-	CCDS26604.1	5	308	0	0	2.8	158	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021439	Ctsq	ENSMUST00000021888	ENSMUSP00000021888	TRANSLATION	protein_coding	-	CCDS26584.1	1	343	4	6	1.5	293.1	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000021439	Ctsq	ENSMUST00000144401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042275	Pelo	ENSMUST00000109226	ENSMUSP00000104849	TRANSLATION	protein_coding	-	CCDS26788.1	1	385	0	2	17.3	394.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000069089	Cdk7	ENSMUST00000225056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069089	Cdk7	ENSMUST00000225946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069089	Cdk7	ENSMUST00000225990	ENSMUSP00000153369	TRANSLATION	protein_coding	-	-	-	309	20	8.58	0	190.8	0	-4,-5	-	-	12.486	MINOR
ENSMUSG00000069089	Cdk7	ENSMUST00000091299	ENSMUSP00000088845	TRANSLATION	protein_coding	-	CCDS36766.1	1	346	20	9.58	7.6	249.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000069089	Cdk7	ENSMUST00000225578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093930	Hmgcs1	ENSMUST00000224188	ENSMUSP00000153064	TRANSLATION	protein_coding	-	CCDS56901.1	-	520	27	8.3	7.6	796.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000093930	Hmgcs1	ENSMUST00000225543	ENSMUSP00000153212	TRANSLATION	protein_coding	stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093930	Hmgcs1	ENSMUST00000226092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093930	Hmgcs1	ENSMUST00000179869	ENSMUSP00000136944	TRANSLATION	protein_coding	-	CCDS56901.1	1	520	27	8.3	7.6	796.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000045835	Hdgfl1	ENSMUST00000055915	ENSMUSP00000057557	TRANSLATION	protein_coding	-	CCDS26388.1	-	283	0	0.6	0.5	39	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021646	Mccc2	ENSMUST00000022148	ENSMUSP00000022148	TRANSLATION	protein_coding	-	CCDS36764.1	1	563	19	14.6	5.1	512	0	-3,0	-	-	20	PRINCIPAL:1
ENSMUSG00000021646	Mccc2	ENSMUST00000221034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021646	Mccc2	ENSMUST00000222083	ENSMUSP00000152781	TRANSLATION	protein_coding	start	-	1	276	2	7.5	0	248.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021646	Mccc2	ENSMUST00000223013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021646	Mccc2	ENSMUST00000221846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021646	Mccc2	ENSMUST00000221344	ENSMUSP00000152799	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0.42	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000021595	Nsun2	ENSMUST00000136932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021595	Nsun2	ENSMUST00000148115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021595	Nsun2	ENSMUST00000176485	ENSMUSP00000135455	TRANSLATION	protein_coding	-	-	5	722	17	5.23	0	129.7	0	-4,-7	-	-	17.4	ALTERNATIVE:2
ENSMUSG00000021595	Nsun2	ENSMUST00000136891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021595	Nsun2	ENSMUST00000127854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021595	Nsun2	ENSMUST00000143716	ENSMUSP00000134962	TRANSLATION	protein_coding	stop	-	3	72	0	0.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021595	Nsun2	ENSMUST00000109699	ENSMUSP00000105321	TRANSLATION	protein_coding	-	CCDS36722.2	1	757	17	5.53	0.5	129.7	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000021595	Nsun2	ENSMUST00000022087	ENSMUSP00000022087	TRANSLATION	protein_coding	-	-	1	691	17	5.53	0	129.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000062705	Tpbpb	ENSMUST00000223978	ENSMUSP00000153262	TRANSLATION	protein_coding	-	-	-	120	0	0	0.5	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000062705	Tpbpb	ENSMUST00000080766	ENSMUSP00000079588	TRANSLATION	protein_coding	-	CCDS36692.1	1	121	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000062705	Tpbpb	ENSMUST00000223698	ENSMUSP00000153438	TRANSLATION	protein_coding	-	CCDS36692.1	-	121	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000014164	Klhl3	ENSMUST00000091583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014164	Klhl3	ENSMUST00000160860	ENSMUSP00000123701	TRANSLATION	protein_coding	-	-	5	587	0	13.33	4.8	515.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000034928	Rnf44	ENSMUST00000134862	ENSMUSP00000114259	TRANSLATION	protein_coding	-	CCDS49267.1	5	351	8	2.75	5.1	49.6	0	-4,-5	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000034928	Rnf44	ENSMUST00000122935	ENSMUSP00000117050	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000146931	ENSMUSP00000121611	TRANSLATION	protein_coding	stop	-	2	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000144052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034928	Rnf44	ENSMUST00000150626	ENSMUSP00000119466	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000134177	ENSMUSP00000118244	TRANSLATION	protein_coding	stop	-	5	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000129881	ENSMUSP00000122161	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000037422	ENSMUSP00000043974	TRANSLATION	protein_coding	-	CCDS49266.1	1	350	8	2.75	5.1	49.6	0	-4,-5	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000034928	Rnf44	ENSMUST00000126717	ENSMUSP00000116043	TRANSLATION	protein_coding	stop	-	3	210	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000123333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034928	Rnf44	ENSMUST00000150806	ENSMUSP00000123198	TRANSLATION	protein_coding	-	CCDS49267.1	1	351	8	2.75	5.1	49.6	0	-4,-5	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000034928	Rnf44	ENSMUST00000128038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034928	Rnf44	ENSMUST00000145397	ENSMUSP00000118186	TRANSLATION	protein_coding	stop	-	2	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000128257	ENSMUSP00000116850	TRANSLATION	protein_coding	-	CCDS49266.1	5	350	8	2.75	5.1	49.6	0	-4,-5	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000034928	Rnf44	ENSMUST00000125927	ENSMUSP00000122292	TRANSLATION	protein_coding	stop	-	3	150	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034928	Rnf44	ENSMUST00000125871	ENSMUSP00000118474	TRANSLATION	protein_coding	-	CCDS49268.1	1	432	8	2.75	6.3	49.6	0	-4,0	-	-	20	PRINCIPAL:4
ENSMUSG00000034928	Rnf44	ENSMUST00000145215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034928	Rnf44	ENSMUST00000177950	ENSMUSP00000136732	TRANSLATION	protein_coding	-	CCDS49266.1	1	350	8	2.75	5.1	49.6	0	-4,-5	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000038068	Rnf144b	ENSMUST00000110111	ENSMUSP00000105738	TRANSLATION	protein_coding	-	CCDS26491.1	1	301	19	3.41	1.5	80	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038068	Rnf144b	ENSMUST00000068891	ENSMUSP00000071017	TRANSLATION	protein_coding	-	CCDS26491.1	1	301	19	3.41	1.5	80	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069171	Nr2f1	ENSMUST00000127137	ENSMUSP00000133704	TRANSLATION	protein_coding	-	CCDS84039.1	5	263	0	3	5.1	136.9	0	-4,-5	-	-	5.61	MINOR
ENSMUSG00000069171	Nr2f1	ENSMUST00000091458	ENSMUSP00000089036	TRANSLATION	protein_coding	-	CCDS26658.1	1	420	8	4	3.9	244.7	0	-4,-5	-	-	19.138	PRINCIPAL:1
ENSMUSG00000069171	Nr2f1	ENSMUST00000125176	ENSMUSP00000122618	TRANSLATION	protein_coding	-	CCDS84040.1	5	273	0	3	6.1	136.9	0	-4,-7	-	-	6.002	MINOR
ENSMUSG00000069171	Nr2f1	ENSMUST00000150498	ENSMUSP00000118161	TRANSLATION	protein_coding	-	CCDS84039.1	1	263	0	3	5.1	136.9	0	-4,-5	-	-	5.61	MINOR
ENSMUSG00000069171	Nr2f1	ENSMUST00000224798	ENSMUSP00000153321	TRANSLATION	protein_coding	stop	-	-	95	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069171	Nr2f1	ENSMUST00000135284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041417	Pik3r1	ENSMUST00000190171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041417	Pik3r1	ENSMUST00000187009	ENSMUSP00000140256	TRANSLATION	protein_coding	stop	-	5	174	0	5	0	150.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041417	Pik3r1	ENSMUST00000055518	ENSMUSP00000056774	TRANSLATION	protein_coding	-	CCDS36769.1	1	724	0	15.5	13.5	453.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041417	Pik3r1	ENSMUST00000035532	ENSMUSP00000047004	TRANSLATION	protein_coding	-	CCDS26740.1	1	454	0	10	12.8	348.9	0	-4,-5	-	-	3.776	MINOR
ENSMUSG00000041417	Pik3r1	ENSMUST00000189426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041417	Pik3r1	ENSMUST00000185795	ENSMUSP00000140312	TRANSLATION	protein_coding	stop	-	1	112	0	3.33	0	69.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041417	Pik3r1	ENSMUST00000185701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025878	Uimc1	ENSMUST00000148702	ENSMUSP00000120935	TRANSLATION	nonsense_mediated_decay	-	-	5	406	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025878	Uimc1	ENSMUST00000124561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025878	Uimc1	ENSMUST00000099496	ENSMUSP00000097095	TRANSLATION	protein_coding	-	CCDS79189.1	1	446	8	1.15	0.5	0	0	-4,-5	-	-	9.942	MINOR
ENSMUSG00000025878	Uimc1	ENSMUST00000128641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025878	Uimc1	ENSMUST00000127195	ENSMUSP00000122196	TRANSLATION	protein_coding	-	-	5	727	8	1.75	1.5	0	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025878	Uimc1	ENSMUST00000133187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025878	Uimc1	ENSMUST00000026997	ENSMUSP00000026997	TRANSLATION	protein_coding	-	CCDS36671.1	1	727	8	1.75	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000021322	Aoah	ENSMUST00000222135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021322	Aoah	ENSMUST00000221982	ENSMUSP00000152286	TRANSLATION	protein_coding	-	-	1	145	0	1.3	0.5	22.7	0	3,-2	-	-	7.482	MINOR
ENSMUSG00000021322	Aoah	ENSMUST00000223364	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021322	Aoah	ENSMUST00000021757	ENSMUSP00000021757	TRANSLATION	protein_coding	-	CCDS26266.1	1	574	0	1.3	1.5	91.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021760	Gpx8	ENSMUST00000231962	ENSMUSP00000156385	TRANSLATION	protein_coding	-	-	-	90	0	0.8	10.8	0	1	-4,-5	-	-	3.498	MINOR
ENSMUSG00000021760	Gpx8	ENSMUST00000022282	ENSMUSP00000022282	TRANSLATION	protein_coding	-	CCDS26781.1	1	209	0	3.55	3.5	118.2	1	-4,-6	-	-	12.765	PRINCIPAL:1
ENSMUSG00000046159	Chrm3	ENSMUST00000187510	ENSMUSP00000140131	TRANSLATION	protein_coding	-	CCDS26238.1	1	589	0	0.8	7.5	270.2	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000046159	Chrm3	ENSMUST00000190395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046159	Chrm3	ENSMUST00000223242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046159	Chrm3	ENSMUST00000063093	ENSMUSP00000055579	TRANSLATION	protein_coding	-	CCDS26238.1	-	589	0	0.8	7.5	270.2	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000078994	Zfp429	ENSMUST00000109732	ENSMUSP00000105354	TRANSLATION	protein_coding	-	CCDS36714.1	1	485	46	2	0.5	270.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000078994	Zfp429	ENSMUST00000181071	ENSMUSP00000137755	TRANSLATION	protein_coding	-	-	1	115	0	0.8	0	80.6	0	-4,-5	-	-	2.4	MINOR
ENSMUSG00000078994	Zfp429	ENSMUST00000224684	ENSMUSP00000152989	TRANSLATION	protein_coding	-	-	-	140	1	0.8	0	80.6	0	-4,-6	-	-	2.4	MINOR
ENSMUSG00000078994	Zfp429	ENSMUST00000224825	ENSMUSP00000153005	TRANSLATION	protein_coding	stop	-	-	110	0	1.4	0	80.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074826	Gm10767	ENSMUST00000099412	ENSMUSP00000133648	TRANSLATION	protein_coding	-	CCDS56889.1	1	103	0	0.8	0.5	73.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000074826	Gm10767	ENSMUST00000168767	ENSMUSP00000133647	TRANSLATION	protein_coding	-	CCDS56889.1	1	103	0	0.8	0.5	73.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021606	Ndufs6	ENSMUST00000222930	ENSMUSP00000152495	TRANSLATION	protein_coding	-	-	3	124	3	3.116	0	49.3	0	-2,1	-	-	13.608	MINOR
ENSMUSG00000021606	Ndufs6	ENSMUST00000223293	ENSMUSP00000152073	TRANSLATION	protein_coding	-	-	2	98	1	2.3	0	36.4	0	-2,1	-	-	8.769	MINOR
ENSMUSG00000021606	Ndufs6	ENSMUST00000022097	ENSMUSP00000022097	TRANSLATION	protein_coding	-	CCDS26630.1	1	116	3	3.05	1.5	64.2	0	-2,1	-	-	14.868	PRINCIPAL:1
ENSMUSG00000021606	Ndufs6	ENSMUST00000147407	ENSMUSP00000119457	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0.8	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000021591	Glrx	ENSMUST00000222530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021591	Glrx	ENSMUST00000022082	ENSMUSP00000022082	TRANSLATION	protein_coding	-	CCDS26651.1	1	107	12	2.33	8.8	61.1	0	-4,-5	-	-	20.91	PRINCIPAL:1
ENSMUSG00000021591	Glrx	ENSMUST00000223120	ENSMUSP00000152802	TRANSLATION	protein_coding	-	CCDS26651.1	5	107	12	2.33	8.8	61.1	0	-4,-5	-	-	20.91	PRINCIPAL:1
ENSMUSG00000021591	Glrx	ENSMUST00000220523	ENSMUSP00000152829	TRANSLATION	protein_coding	-	-	3	84	10	1.528	0	62	0	-4,-5	-	-	14.604	MINOR
ENSMUSG00000021730	Hcn1	ENSMUST00000207599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021730	Hcn1	ENSMUST00000006991	ENSMUSP00000006991	TRANSLATION	protein_coding	-	CCDS26793.1	1	910	12	6.9	1.5	211.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019132	BC005537	ENSMUST00000155575	ENSMUSP00000123652	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	308.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019132	BC005537	ENSMUST00000019276	ENSMUSP00000019276	TRANSLATION	protein_coding	-	CCDS26379.1	1	229	0	0	19.5	457.8	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000115697	Vmn1r216	ENSMUST00000228802	ENSMUSP00000153991	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	298	0	0	0.5	116.2	5	-2,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000115697	Vmn1r216	ENSMUST00000227317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115697	Vmn1r216	ENSMUST00000228389	ENSMUSP00000153724	TRANSLATION	protein_coding,RT	-	CCDS26331.1	-	298	0	0	0.5	116.2	5	-2,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021381	Barx1	ENSMUST00000021813	ENSMUSP00000021813	TRANSLATION	protein_coding	-	CCDS49258.1	1	254	0	1.75	7.5	73.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000051054	1700014D04Rik	ENSMUST00000180139	ENSMUSP00000136424	TRANSLATION	protein_coding	-	-	2	983	0	0	0.5	328.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051054	1700014D04Rik	ENSMUST00000055343	ENSMUSP00000052403	TRANSLATION	protein_coding	stop	-	-	265	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051054	1700014D04Rik	ENSMUST00000178508	ENSMUSP00000136897	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	49.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000110086	Gm45623	ENSMUST00000210744	ENSMUSP00000147916	TRANSLATION	protein_coding	-	-	-	103	0	0	3.6	0	0	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000039219	Arid4b	ENSMUST00000110536	ENSMUSP00000106165	TRANSLATION	protein_coding	-	CCDS36600.1	5	1227	0	8.99	0.5	199.3	0	-4,-5	-	-	7.494	MINOR
ENSMUSG00000039219	Arid4b	ENSMUST00000110534	ENSMUSP00000106163	TRANSLATION	protein_coding	-	CCDS36599.1	1	1314	0	9.99	0.5	241.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039219	Arid4b	ENSMUST00000222928	ENSMUSP00000152177	TRANSLATION	nonsense_mediated_decay	-	-	5	128	0	3.566	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039219	Arid4b	ENSMUST00000148941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039219	Arid4b	ENSMUST00000151151	ENSMUSP00000152798	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039219	Arid4b	ENSMUST00000149579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039219	Arid4b	ENSMUST00000222346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039219	Arid4b	ENSMUST00000151182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039219	Arid4b	ENSMUST00000110533	ENSMUSP00000106162	TRANSLATION	protein_coding	-	-	1	473	0	8.39	0	199.3	0	-4,-5	-	-	6.294	MINOR
ENSMUSG00000039219	Arid4b	ENSMUST00000039538	ENSMUSP00000043889	TRANSLATION	protein_coding	-	CCDS36600.1	5	1227	0	8.99	0.5	199.3	0	-4,-5	-	-	7.494	MINOR
ENSMUSG00000039219	Arid4b	ENSMUST00000155553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039219	Arid4b	ENSMUST00000129488	ENSMUSP00000118687	TRANSLATION	protein_coding	stop	-	1	540	0	8.39	0	199.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000114904	Gm49352	ENSMUST00000225902	ENSMUSP00000152924	TRANSLATION	protein_coding,RT	stop	-	-	109	0	2	0	88	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000042043	Tbca	ENSMUST00000220819	ENSMUSP00000152391	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042043	Tbca	ENSMUST00000220825	ENSMUSP00000152268	TRANSLATION	protein_coding	-	-	3	84	0	2.25	2	80.5	0	-4,-5	-	-	8.876	MINOR
ENSMUSG00000042043	Tbca	ENSMUST00000220561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042043	Tbca	ENSMUST00000046644	ENSMUSP00000038781	TRANSLATION	protein_coding	-	CCDS26694.1	1	108	0	3.08	16.3	109.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000042655	Shisal2b	ENSMUST00000043061	ENSMUSP00000042302	TRANSLATION	protein_coding	-	CCDS26754.1	1	158	0	0	6.5	32.3	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000042655	Shisal2b	ENSMUST00000223913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042655	Shisal2b	ENSMUST00000225969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114635	Gm49392	ENSMUST00000225690	ENSMUSP00000153567	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	74	0	1.6	0	48.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000054021	Sirt5	ENSMUST00000221515	ENSMUSP00000152526	TRANSLATION	protein_coding	-	-	5	350	35	7.15	0.5	162.2	0	-4,0	-	-	16.5	MINOR
ENSMUSG00000054021	Sirt5	ENSMUST00000220576	ENSMUSP00000152740	TRANSLATION	protein_coding	-	-	5	289	31	7.15	0	162.2	0	-4,0	-	-	13.836	MINOR
ENSMUSG00000054021	Sirt5	ENSMUST00000220458	ENSMUSP00000152668	TRANSLATION	protein_coding	stop	-	3	95	13	1.9	0	35.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000054021	Sirt5	ENSMUST00000066804	ENSMUSP00000071048	TRANSLATION	protein_coding	-	CCDS26478.1	1	310	34	7.9	6.3	162.2	0	-4,0	-	-	19.334	PRINCIPAL:1
ENSMUSG00000054021	Sirt5	ENSMUST00000222106	ENSMUSP00000152763	TRANSLATION	protein_coding	start	-	5	135	14	3.566	0	46.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054021	Sirt5	ENSMUST00000221481	ENSMUSP00000152640	TRANSLATION	protein_coding	-	-	5	289	31	7.15	0	162.2	0	-4,0	-	-	13.836	MINOR
ENSMUSG00000054021	Sirt5	ENSMUST00000221955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054021	Sirt5	ENSMUST00000220874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054021	Sirt5	ENSMUST00000223194	ENSMUSP00000152796	TRANSLATION	protein_coding	-	CCDS26478.1	1	310	34	7.9	6.3	162.2	0	-4,0	-	-	19.334	PRINCIPAL:1
ENSMUSG00000054021	Sirt5	ENSMUST00000222489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054021	Sirt5	ENSMUST00000220645	ENSMUSP00000152760	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0.4	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000049539	H1f1	ENSMUST00000055770	ENSMUSP00000062030	TRANSLATION	protein_coding	-	CCDS26369.1	-	213	0	0.6	0.5	77.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041324	Inhba	ENSMUST00000042603	ENSMUSP00000047894	TRANSLATION	protein_coding	-	CCDS26251.1	1	424	0	1.8	2.7	142	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041324	Inhba	ENSMUST00000164993	ENSMUSP00000132085	TRANSLATION	protein_coding	-	CCDS26251.1	1	424	0	1.8	2.7	142	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000069170	Adgrv1	ENSMUST00000126444	ENSMUSP00000123552	TRANSLATION	protein_coding	-	-	1	1218	31	5.6	0	188.3	0	-1,-4	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000125663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069170	Adgrv1	ENSMUST00000156627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069170	Adgrv1	ENSMUST00000224088	ENSMUSP00000153419	TRANSLATION	protein_coding	-	-	-	318	0	0	0	22.6	4	-4,-5	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000156631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069170	Adgrv1	ENSMUST00000129725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069170	Adgrv1	ENSMUST00000095585	ENSMUSP00000093245	TRANSLATION	protein_coding	-	CCDS36737.1	1	6298	108	11.725	0.5	982.1	4	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000069170	Adgrv1	ENSMUST00000125698	ENSMUSP00000120136	TRANSLATION	nonsense_mediated_decay	start	-	1	533	12	1.76	0	81.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000128585	ENSMUSP00000121899	TRANSLATION	protein_coding	-	-	1	616	22	3.78	0	94.3	0	-1,-4	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000146749	ENSMUSP00000114579	TRANSLATION	protein_coding	-	-	1	416	22	3.18	0	80.1	0	-1,-4	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000128120	ENSMUSP00000122358	TRANSLATION	protein_coding	-	-	1	318	0	0	0	22.6	4	-4,-5	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000132045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069170	Adgrv1	ENSMUST00000109565	ENSMUSP00000105193	TRANSLATION	protein_coding	-	-	1	2238	31	4.225	0	466.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000069170	Adgrv1	ENSMUST00000146141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021619	Atg10	ENSMUST00000223729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021619	Atg10	ENSMUST00000224449	ENSMUSP00000153331	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021619	Atg10	ENSMUST00000022119	ENSMUSP00000022119	TRANSLATION	protein_coding	-	CCDS26675.1	1	211	0	0	0.5	67.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021460	Auh	ENSMUST00000128544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021460	Auh	ENSMUST00000153329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021460	Auh	ENSMUST00000110031	ENSMUSP00000105658	TRANSLATION	protein_coding	-	-	1	158	4	2.63	0.5	30.1	0	-1,3	-	-	0	MINOR
ENSMUSG00000021460	Auh	ENSMUST00000142515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021460	Auh	ENSMUST00000137064	ENSMUSP00000121852	TRANSLATION	nonsense_mediated_decay	start	-	5	239	17	6.35	0	169	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021460	Auh	ENSMUST00000123599	ENSMUSP00000116179	TRANSLATION	protein_coding	start/stop	-	3	219	20	5.08	0	158.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021460	Auh	ENSMUST00000132598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021460	Auh	ENSMUST00000120535	ENSMUSP00000112427	TRANSLATION	protein_coding	-	-	1	144	11	3.38	0	46.8	0	-1,3	-	-	0	MINOR
ENSMUSG00000021460	Auh	ENSMUST00000230563	ENSMUSP00000155837	TRANSLATION	protein_coding	start	-	-	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021460	Auh	ENSMUST00000133906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021460	Auh	ENSMUST00000021913	ENSMUSP00000021913	TRANSLATION	protein_coding	-	CCDS26518.1	1	314	20	7.63	0.5	199	0	-1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000021460	Auh	ENSMUST00000128380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021460	Auh	ENSMUST00000151469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021460	Auh	ENSMUST00000119311	ENSMUSP00000113659	TRANSLATION	protein_coding	-	-	1	115	4	2.63	0	30.1	0	-1,3	-	-	0	MINOR
ENSMUSG00000098692	Gm28041	ENSMUST00000166080	ENSMUSP00000126669	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	114	0	1	0	79.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000095609	Gm21188	ENSMUST00000224147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095609	Gm21188	ENSMUST00000178618	ENSMUSP00000137602	TRANSLATION	protein_coding	-	CCDS79248.1	-	190	0	0	0.5	214.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095609	Gm21188	ENSMUST00000224713	ENSMUSP00000153701	TRANSLATION	protein_coding	-	CCDS79248.1	-	190	0	0	0.5	214.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095609	Gm21188	ENSMUST00000225638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021681	Aggf1	ENSMUST00000022189	ENSMUSP00000022189	TRANSLATION	protein_coding	-	CCDS26697.1	1	711	0	1.74	0.5	98.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021681	Aggf1	ENSMUST00000161671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114473	Gm49398	ENSMUST00000223988	ENSMUSP00000153694	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	62	0	0	0	0	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000069308	Hist1h2bp	ENSMUST00000102982	ENSMUSP00000100047	TRANSLATION	protein_coding	-	CCDS79168.1	-	126	0	1	7.6	92.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000069308	Hist1h2bp	ENSMUST00000110473	ENSMUSP00000106099	TRANSLATION	protein_coding	-	CCDS26298.2	1	138	0	1	1.5	92.1	0	-4,-5	-	-	12.228	MINOR
ENSMUSG00000076744	Trgv7	ENSMUST00000103553	ENSMUSP00000100334	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.4	0	37.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021207	Akr1c21	ENSMUST00000137279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021207	Akr1c21	ENSMUST00000021628	ENSMUSP00000021628	TRANSLATION	protein_coding	-	CCDS26225.1	1	323	26	7.75	5.1	180.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021207	Akr1c21	ENSMUST00000223285	ENSMUSP00000152465	TRANSLATION	nonsense_mediated_decay	-	-	5	193	10	4.5	0	112.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042015	Wdr41	ENSMUST00000222948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042015	Wdr41	ENSMUST00000160115	ENSMUSP00000138543	TRANSLATION	protein_coding	-	-	5	467	0	3.98	0	17	0	-4,-5	-	-	4.836	MINOR
ENSMUSG00000042015	Wdr41	ENSMUST00000160801	ENSMUSP00000124033	TRANSLATION	protein_coding	-	CCDS56896.2	5	460	0	6.08	6.3	33.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000042015	Wdr41	ENSMUST00000160409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042015	Wdr41	ENSMUST00000056512	ENSMUSP00000055145	TRANSLATION	protein_coding	-	-	1	460	0	5.93	6.3	33.6	0	-4,-5	-	-	13.7	PRINCIPAL:1
ENSMUSG00000042015	Wdr41	ENSMUST00000159647	ENSMUSP00000138501	TRANSLATION	protein_coding	-	-	5	329	0	3.98	0	17	0	-4,-5	-	-	4.836	MINOR
ENSMUSG00000042015	Wdr41	ENSMUST00000167155	ENSMUSP00000129595	TRANSLATION	protein_coding	-	-	1	329	0	3.83	0	17	0	-4,-5	-	-	4.536	MINOR
ENSMUSG00000042015	Wdr41	ENSMUST00000222995	ENSMUSP00000152667	TRANSLATION	protein_coding	stop	-	5	240	0	3.98	0	18.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042015	Wdr41	ENSMUST00000223422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041632	Mrps27	ENSMUST00000225973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041632	Mrps27	ENSMUST00000052249	ENSMUSP00000062326	TRANSLATION	protein_coding	-	CCDS26722.1	1	415	0	10.25	1.5	508.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041632	Mrps27	ENSMUST00000224660	ENSMUSP00000156296	TRANSLATION	protein_coding	stop	-	-	289	0	6.75	0	342.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021679	S100z	ENSMUST00000022186	ENSMUSP00000022186	TRANSLATION	protein_coding	-	CCDS36752.1	1	99	14	2	19.1	65.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000045508	Olfr1367	ENSMUST00000059216	ENSMUSP00000055870	TRANSLATION	protein_coding	-	CCDS26272.1	-	316	0	0.36	0.5	182.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021417	Eci2	ENSMUST00000170538	ENSMUSP00000129428	TRANSLATION	protein_coding	stop	-	3	229	27	6.28	0	168	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000178421	ENSMUSP00000137411	TRANSLATION	protein_coding	-	CCDS26450.1	1	358	30	9.28	0.5	245.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021417	Eci2	ENSMUST00000110251	ENSMUSP00000105880	TRANSLATION	protein_coding	-	-	1	378	30	9.28	0	245.6	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000021417	Eci2	ENSMUST00000170989	ENSMUSP00000129477	TRANSLATION	protein_coding	stop	-	5	202	23	5.28	0	153.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000166109	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021417	Eci2	ENSMUST00000163280	ENSMUSP00000126500	TRANSLATION	protein_coding	stop	-	3	216	25	5.78	0	165.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000171258	ENSMUSP00000129164	TRANSLATION	protein_coding	stop	-	5	170	21	4.55	0	151.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000164421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021417	Eci2	ENSMUST00000167036	ENSMUSP00000130076	TRANSLATION	protein_coding	stop	-	5	199	23	5.28	0	153.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000021854	ENSMUSP00000021854	TRANSLATION	protein_coding	-	CCDS26450.1	1	358	30	9.28	0.5	245.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021417	Eci2	ENSMUST00000084345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021417	Eci2	ENSMUST00000220713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021417	Eci2	ENSMUST00000169759	ENSMUSP00000130283	TRANSLATION	protein_coding	stop	-	2	119	13	3	0	107	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021417	Eci2	ENSMUST00000171229	ENSMUSP00000131735	TRANSLATION	protein_coding	-	CCDS49234.1	1	391	30	9.28	1.5	245.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000049538	Adamts16	ENSMUST00000130726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049538	Adamts16	ENSMUST00000123552	ENSMUSP00000122031	TRANSLATION	nonsense_mediated_decay	-	-	5	684	17	6.29	0	273.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000049538	Adamts16	ENSMUST00000109694	ENSMUSP00000105316	TRANSLATION	protein_coding	-	-	1	900	17	7.94	0	394.1	0	0,-3	-	-	10.002	MINOR
ENSMUSG00000049538	Adamts16	ENSMUST00000080145	ENSMUSP00000079041	TRANSLATION	protein_coding	-	CCDS36723.1	1	1222	20	7.94	0.5	522.7	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000014850	Msh3	ENSMUST00000190462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014850	Msh3	ENSMUST00000187424	ENSMUSP00000139622	TRANSLATION	protein_coding	-	-	2	167	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000191550	ENSMUSP00000140659	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000187874	ENSMUSP00000139620	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000185852	ENSMUSP00000140002	TRANSLATION	protein_coding	-	CCDS49326.1	1	1095	15	22.13	0.5	590	0	-4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000014850	Msh3	ENSMUST00000191509	ENSMUSP00000141158	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000191304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014850	Msh3	ENSMUST00000186392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014850	Msh3	ENSMUST00000022220	ENSMUSP00000022220	TRANSLATION	protein_coding	-	CCDS79222.1	1	1094	15	22.13	0.5	590	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000014850	Msh3	ENSMUST00000190393	ENSMUSP00000141163	TRANSLATION	nonsense_mediated_decay	-	-	1	360	0	1.8	0	39.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000190761	ENSMUSP00000140402	TRANSLATION	protein_coding	start	-	5	129	3	2.33	0	122.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014850	Msh3	ENSMUST00000186878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014850	Msh3	ENSMUST00000187831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014850	Msh3	ENSMUST00000189376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014850	Msh3	ENSMUST00000191242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063200	Nol7	ENSMUST00000071926	ENSMUSP00000071818	TRANSLATION	protein_coding	-	CCDS36644.1	1	254	0	0	0.5	106.6	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000063200	Nol7	ENSMUST00000222754	ENSMUSP00000152886	TRANSLATION	protein_coding	start	-	3	82	0	0	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063200	Nol7	ENSMUST00000222499	ENSMUSP00000152581	TRANSLATION	protein_coding	-	-	1	243	0	0	0	106.6	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000063200	Nol7	ENSMUST00000220997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063200	Nol7	ENSMUST00000222416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063200	Nol7	ENSMUST00000222305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063200	Nol7	ENSMUST00000223188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094870	Zfp131	ENSMUST00000177916	ENSMUSP00000136867	TRANSLATION	protein_coding	-	CCDS79245.1	1	619	21	4.97	1.5	132.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094870	Zfp131	ENSMUST00000223813	ENSMUSP00000152941	TRANSLATION	protein_coding	-	CCDS56903.1	-	585	18	4.49	1.5	132.3	0	-4,-5	-	-	15.042	MINOR
ENSMUSG00000094870	Zfp131	ENSMUST00000223797	ENSMUSP00000153017	TRANSLATION	protein_coding	start	-	-	103	8	1.05	0	25.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094870	Zfp131	ENSMUST00000225484	ENSMUSP00000153572	TRANSLATION	nonsense_mediated_decay	start	-	-	62	0	0.8	0	24.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094870	Zfp131	ENSMUST00000223812	ENSMUSP00000153596	TRANSLATION	protein_coding	-	-	-	112	0	1.8	0	54.6	0	-4,-5	-	-	1.338	MINOR
ENSMUSG00000094870	Zfp131	ENSMUST00000224946	ENSMUSP00000153517	TRANSLATION	protein_coding	-	-	-	353	11	4.13	0	112.1	0	-4,-5	-	-	9.108	MINOR
ENSMUSG00000094870	Zfp131	ENSMUST00000224969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094870	Zfp131	ENSMUST00000223722	ENSMUSP00000153044	TRANSLATION	protein_coding	-	CCDS79245.1	-	619	21	4.97	1.5	132.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094870	Zfp131	ENSMUST00000178271	ENSMUSP00000136019	TRANSLATION	protein_coding	-	CCDS56903.1	1	585	18	4.49	1.5	132.3	0	-4,-5	-	-	15.042	MINOR
ENSMUSG00000100235	Gm28557	ENSMUST00000185856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100235	Gm28557	ENSMUST00000225558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000100235	Gm28557	ENSMUST00000187652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100235	Gm28557	ENSMUST00000185954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000100235	Gm28557	ENSMUST00000186303	ENSMUSP00000140296	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	336	38	0.8	0	205.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000025875	Tspan17	ENSMUST00000145574	ENSMUSP00000119687	TRANSLATION	protein_coding	start	-	3	192	0	1.59	0	145.9	6	4,-1	-	-	-1	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000163796	ENSMUSP00000131671	TRANSLATION	protein_coding	stop	-	3	193	0	2.09	0	139.3	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000163915	ENSMUSP00000130765	TRANSLATION	protein_coding	-	-	5	152	0	1.67	0	64.3	6	-4,-7	-	-	3.354	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000131692	ENSMUSP00000115287	TRANSLATION	protein_coding	stop	-	1	285	0	2.99	3.6	216.9	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000171859	ENSMUSP00000128568	TRANSLATION	protein_coding	start/stop	-	3	145	0	2.24	0	101.3	5	0,-4	-	-	-1	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000130568	ENSMUSP00000123607	TRANSLATION	protein_coding	start	-	5	187	0	2.19	0	147.3	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000099503	ENSMUSP00000097102	TRANSLATION	protein_coding	-	-	5	273	0	2.99	9.4	217.2	11	-4,-5	-	-	14.604	MINOR
ENSMUSG00000025875	Tspan17	ENSMUST00000139574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025875	Tspan17	ENSMUST00000026993	ENSMUSP00000026993	TRANSLATION	protein_coding	-	CCDS26536.1	1	270	0	2.99	13.9	216.9	11	-4,-5	-	-	15.982	PRINCIPAL:1
ENSMUSG00000076749	Trgc1	ENSMUST00000103558	ENSMUSP00000100338	TRANSLATION	TR_C_gene	start	-	-	172	0	1	0	38	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021342	Prl	ENSMUST00000224627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021342	Prl	ENSMUST00000018061	ENSMUSP00000018061	TRANSLATION	protein_coding	-	-	1	225	0	3.8	1.5	190.4	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021342	Prl	ENSMUST00000224228	ENSMUSP00000153245	TRANSLATION	protein_coding	-	-	-	226	0	3.8	1.5	190.4	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021342	Prl	ENSMUST00000110369	ENSMUSP00000105998	TRANSLATION	protein_coding	-	CCDS26389.1	1	228	0	3.8	1.5	190.4	0	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000021532	Fastkd3	ENSMUST00000223187	ENSMUSP00000152573	TRANSLATION	protein_coding	stop	-	2	135	0	0	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000021532	Fastkd3	ENSMUST00000222631	ENSMUSP00000152438	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000021532	Fastkd3	ENSMUST00000222660	ENSMUSP00000152488	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000021532	Fastkd3	ENSMUST00000222068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021532	Fastkd3	ENSMUST00000223319	ENSMUSP00000152635	TRANSLATION	nonsense_mediated_decay	-	-	1	571	0	0	0	131.8	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000021532	Fastkd3	ENSMUST00000221006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021532	Fastkd3	ENSMUST00000222685	ENSMUSP00000152259	TRANSLATION	nonsense_mediated_decay	start	-	3	101	0	0	0	53	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021532	Fastkd3	ENSMUST00000051784	ENSMUSP00000061737	TRANSLATION	protein_coding	-	CCDS36719.1	1	661	0	0	0.5	209.3	0	-3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021532	Fastkd3	ENSMUST00000221640	ENSMUSP00000152563	TRANSLATION	protein_coding	start	-	2	80	0	0	0	29.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039233	Tbce	ENSMUST00000159427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000160553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000039894	ENSMUSP00000047880	TRANSLATION	protein_coding	-	CCDS26247.1	1	524	0	7	1.5	94.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039233	Tbce	ENSMUST00000162241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000160304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000162440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039233	Tbce	ENSMUST00000159966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000160776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000159239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000159893	ENSMUSP00000125244	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039233	Tbce	ENSMUST00000162326	ENSMUSP00000125613	TRANSLATION	nonsense_mediated_decay	-	-	1	428	0	3.95	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039233	Tbce	ENSMUST00000160510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039233	Tbce	ENSMUST00000161554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058022	Adtrp	ENSMUST00000220680	ENSMUSP00000152611	TRANSLATION	nonsense_mediated_decay	-	-	5	185	0	0	0	123.1	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000058022	Adtrp	ENSMUST00000137905	ENSMUSP00000122312	TRANSLATION	protein_coding	stop	-	2	167	0	0	0	162.7	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000058022	Adtrp	ENSMUST00000072012	ENSMUSP00000071899	TRANSLATION	protein_coding	-	CCDS36642.1	1	262	0	0	0.5	214.5	14	-4,0	-	-	6	PRINCIPAL:3
ENSMUSG00000058022	Adtrp	ENSMUST00000121404	ENSMUSP00000113661	TRANSLATION	protein_coding	-	CCDS49250.1	1	230	0	0	2.7	214.5	14	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000058022	Adtrp	ENSMUST00000223337	ENSMUSP00000152218	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	105.6	5	2,-3	-	-	-1	MINOR
ENSMUSG00000058022	Adtrp	ENSMUST00000221691	ENSMUSP00000152742	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	33.3	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000058022	Adtrp	ENSMUST00000179758	ENSMUSP00000137365	TRANSLATION	protein_coding	-	CCDS49250.1	5	230	0	0	2.7	214.5	14	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000058022	Adtrp	ENSMUST00000220949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074871	Ctsm	ENSMUST00000225965	ENSMUSP00000152912	TRANSLATION	protein_coding	start	-	-	87	0	2.298	0	46.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074871	Ctsm	ENSMUST00000223778	ENSMUSP00000153101	TRANSLATION	protein_coding	-	CCDS36694.1	-	333	4	7.68	0.5	285.8	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000074871	Ctsm	ENSMUST00000225268	ENSMUSP00000153564	TRANSLATION	protein_coding	start	-	-	39	0	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074871	Ctsm	ENSMUST00000099451	ENSMUSP00000097050	TRANSLATION	protein_coding	-	CCDS36694.1	1	333	4	7.68	0.5	285.8	0	2,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021416	Eci3	ENSMUST00000164155	ENSMUSP00000132701	TRANSLATION	protein_coding	stop	-	5	260	17	5.55	0	155.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021416	Eci3	ENSMUST00000021853	ENSMUSP00000021853	TRANSLATION	protein_coding	-	CCDS26449.1	1	317	17	6.55	0.5	164.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021497	Txndc15	ENSMUST00000021959	ENSMUSP00000021959	TRANSLATION	protein_coding	-	CCDS26553.1	1	344	0	1.2	1.5	34.9	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000021497	Txndc15	ENSMUST00000223649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115791	Vmn1r217	ENSMUST00000091721	ENSMUSP00000089314	TRANSLATION	protein_coding	-	CCDS26332.1	-	298	0	0	0.5	122	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115791	Vmn1r217	ENSMUST00000227110	ENSMUSP00000154137	TRANSLATION	protein_coding	-	CCDS26332.1	-	298	0	0	0.5	122	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115791	Vmn1r217	ENSMUST00000228656	ENSMUSP00000154563	TRANSLATION	protein_coding	-	CCDS26332.1	-	298	0	0	0.5	122	4	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049517	Rps23	ENSMUST00000224463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049517	Rps23	ENSMUST00000051955	ENSMUSP00000054490	TRANSLATION	protein_coding	-	CCDS26674.1	1	143	0	3	21.5	176	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000049517	Rps23	ENSMUST00000224430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078995	Zfp456	ENSMUST00000057070	ENSMUSP00000059686	TRANSLATION	protein_coding	-	CCDS36713.1	1	458	43	1.42	0.5	270.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000078995	Zfp456	ENSMUST00000172266	ENSMUSP00000130928	TRANSLATION	protein_coding	-	-	3	114	0	1	0	82.2	0	-4,-7	-	-	4.224	MINOR
ENSMUSG00000078995	Zfp456	ENSMUST00000225787	ENSMUSP00000153162	TRANSLATION	protein_coding	stop	-	-	51	0	1	0	82.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038462	Uqcrfs1	ENSMUST00000042834	ENSMUSP00000045284	TRANSLATION	protein_coding	-	CCDS26416.1	1	274	10	2	9.6	246.1	0	-3,1	-	-	21	PRINCIPAL:1
ENSMUSG00000069258	Prl2b1	ENSMUST00000091678	ENSMUSP00000089267	TRANSLATION	protein_coding	-	-	1	235	0	2.6	0	184.7	0	1,-3	-	-	11.832	ALTERNATIVE:2
ENSMUSG00000069258	Prl2b1	ENSMUST00000102954	ENSMUSP00000100019	TRANSLATION	protein_coding	-	CCDS26397.1	1	228	0	2.6	1.5	187.5	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000110477	Gm3045	ENSMUST00000212844	ENSMUSP00000148690	TRANSLATION	protein_coding	-	-	5	209	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000034675	Dbn1	ENSMUST00000127867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034675	Dbn1	ENSMUST00000021950	ENSMUSP00000021950	TRANSLATION	protein_coding	-	CCDS49274.1	1	706	0	3.15	0.5	64.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034675	Dbn1	ENSMUST00000124480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034675	Dbn1	ENSMUST00000139275	ENSMUSP00000122574	TRANSLATION	protein_coding	stop	-	3	169	0	1.7	0	37.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034675	Dbn1	ENSMUST00000109921	ENSMUSP00000105547	TRANSLATION	protein_coding	-	CCDS49273.1	1	661	0	3.15	0.5	64.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034675	Dbn1	ENSMUST00000135705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034675	Dbn1	ENSMUST00000175813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034675	Dbn1	ENSMUST00000139516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034675	Dbn1	ENSMUST00000109923	ENSMUSP00000105549	TRANSLATION	protein_coding	-	CCDS36677.1	1	660	0	3.15	0.5	64.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000100296	Vmn1r205	ENSMUST00000185475	ENSMUSP00000139977	TRANSLATION	protein_coding	-	CCDS26322.1	-	316	0	0	0.5	119.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021448	Shc3	ENSMUST00000223543	ENSMUSP00000152080	TRANSLATION	protein_coding	-	-	1	461	0	5.3	0	166.5	0	-4,-7	-	-	3.612	MINOR
ENSMUSG00000021448	Shc3	ENSMUST00000221850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021448	Shc3	ENSMUST00000021898	ENSMUSP00000021898	TRANSLATION	protein_coding	-	CCDS49265.1	1	474	0	7.63	0.5	228.6	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000021448	Shc3	ENSMUST00000239056	ENSMUSP00000158865	TRANSLATION	protein_coding	-	-	-	594	0	7.63	1	228.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000036123	Slc9a3	ENSMUST00000221703	ENSMUSP00000152682	TRANSLATION	protein_coding	-	-	5	829	0	3.495	1.5	284.7	10	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000036123	Slc9a3	ENSMUST00000225423	ENSMUSP00000153255	TRANSLATION	protein_coding	-	-	-	862	0	3.495	0	284.7	10	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000036123	Slc9a3	ENSMUST00000036208	ENSMUSP00000038142	TRANSLATION	protein_coding	-	CCDS36731.1	2	829	0	3.495	1.5	284.7	10	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000036123	Slc9a3	ENSMUST00000221410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021377	Dek	ENSMUST00000129352	ENSMUSP00000114392	TRANSLATION	protein_coding	stop	-	2	258	0	3.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021377	Dek	ENSMUST00000138401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021377	Dek	ENSMUST00000135278	ENSMUSP00000121663	TRANSLATION	protein_coding	stop	-	1	202	0	3.398	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021377	Dek	ENSMUST00000021807	ENSMUSP00000021807	TRANSLATION	protein_coding	-	CCDS26490.1	1	380	0	5.748	3.9	63.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021377	Dek	ENSMUST00000224150	ENSMUSP00000153538	TRANSLATION	nonsense_mediated_decay	start	-	-	80	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021377	Dek	ENSMUST00000150652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021377	Dek	ENSMUST00000143933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021696	Elovl7	ENSMUST00000022207	ENSMUSP00000022207	TRANSLATION	protein_coding	-	CCDS36779.1	1	281	0	0	13.3	221.3	7	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000021696	Elovl7	ENSMUST00000225550	ENSMUSP00000152997	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0	0	22.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000221987	ENSMUSP00000152697	TRANSLATION	protein_coding	stop	-	3	211	7	3.664	0	241.8	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000222029	ENSMUSP00000152525	TRANSLATION	protein_coding	-	CCDS36727.1	1	615	11	10.704	1.5	599.9	29	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021612	Slc6a18	ENSMUST00000220703	ENSMUSP00000152605	TRANSLATION	nonsense_mediated_decay	start	-	3	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000223074	ENSMUSP00000152146	TRANSLATION	protein_coding	-	-	1	605	11	10.506	0.5	579.1	27	-4,-5	-	-	16.356	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000109680	ENSMUSP00000105302	TRANSLATION	protein_coding	-	CCDS49311.1	1	577	11	9.266	1.5	518.5	27	-4,-5	-	-	10.242	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000223026	ENSMUSP00000152516	TRANSLATION	nonsense_mediated_decay	-	-	1	422	11	7.164	0	418.9	18	-4,-5	-	-	-1	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000022105	ENSMUSP00000022105	TRANSLATION	protein_coding	-	-	1	542	11	9.646	0.5	518.2	22	-4,-5	-	-	10.98	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000109679	ENSMUSP00000105301	TRANSLATION	protein_coding	-	CCDS49312.1	1	552	11	9.844	1.5	538.9	24	-4,-5	-	-	12.618	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000220650	ENSMUSP00000152403	TRANSLATION	protein_coding	-	-	1	514	11	8.406	1.5	454	22	-4,-5	-	-	7.404	MINOR
ENSMUSG00000021612	Slc6a18	ENSMUST00000221026	ENSMUSP00000152273	TRANSLATION	protein_coding	stop	-	3	109	6	2.264	0	148.3	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000095088	Trav11d	ENSMUST00000103648	ENSMUSP00000100425	TRANSLATION	TR_V_gene	stop	-	-	114	3	1	0	49.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000072738	Gm16440	ENSMUST00000100900	ENSMUSP00000098460	TRANSLATION	protein_coding	-	-	5	218	0	0	0.5	71.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092152	Gm17026	ENSMUST00000166674	ENSMUSP00000129050	TRANSLATION	protein_coding	start	-	1	213	0	0	0	91	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000095607	Trav5-4	ENSMUST00000103664	ENSMUSP00000100441	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	61.4	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000094021	Gm3685	ENSMUST00000169215	ENSMUSP00000126624	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094021	Gm3685	ENSMUST00000179199	ENSMUSP00000137412	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000051212	Gpr183	ENSMUST00000049872	ENSMUSP00000052404	TRANSLATION	protein_coding	-	CCDS27343.1	1	357	0	1.28	2.7	157.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051212	Gpr183	ENSMUST00000227267	ENSMUSP00000154545	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090440	1700049E17Rik2	ENSMUST00000163912	ENSMUSP00000130091	TRANSLATION	protein_coding	-	-	5	198	0	0	0.5	85.7	0	-4,-2	-	-	6	PRINCIPAL:5
ENSMUSG00000090440	1700049E17Rik2	ENSMUST00000111874	ENSMUSP00000107505	TRANSLATION	protein_coding	-	-	5	163	0	0	0	85.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000021991	Cacna2d3	ENSMUST00000225863	ENSMUSP00000153444	TRANSLATION	nonsense_mediated_decay	-	-	-	134	1	2.72	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021991	Cacna2d3	ENSMUST00000022567	ENSMUSP00000022567	TRANSLATION	protein_coding	-	-	1	1091	3	14.72	6.3	305.8	0	0,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000021991	Cacna2d3	ENSMUST00000225985	ENSMUSP00000152967	TRANSLATION	protein_coding	-	-	-	264	0	3	0	70	0	-2,-3	-	-	0	MINOR
ENSMUSG00000021991	Cacna2d3	ENSMUST00000224128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021991	Cacna2d3	ENSMUST00000225733	ENSMUSP00000153143	TRANSLATION	non_stop_decay	stop	-	-	359	1	5.38	0	32.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021991	Cacna2d3	ENSMUST00000225668	ENSMUSP00000153037	TRANSLATION	nonsense_mediated_decay	-	-	-	100	0	0.72	0	25.1	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000021991	Cacna2d3	ENSMUST00000226048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021991	Cacna2d3	ENSMUST00000225953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021991	Cacna2d3	ENSMUST00000224950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047894	Ang2	ENSMUST00000228835	ENSMUSP00000154100	TRANSLATION	protein_coding	-	CCDS27040.1	-	145	5	1	3.9	117.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000047894	Ang2	ENSMUST00000051274	ENSMUSP00000062902	TRANSLATION	protein_coding	-	CCDS27040.1	-	145	5	1	3.9	117.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000035067	Xkr6	ENSMUST00000176862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035067	Xkr6	ENSMUST00000119973	ENSMUSP00000113708	TRANSLATION	protein_coding	-	CCDS27204.2	1	638	0	0	1.5	409.8	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035067	Xkr6	ENSMUST00000176510	ENSMUSP00000134975	TRANSLATION	nonsense_mediated_decay	start	-	5	209	0	0	0	83.9	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000035067	Xkr6	ENSMUST00000177500	ENSMUSP00000135609	TRANSLATION	nonsense_mediated_decay	start	-	5	92	0	0	0	27	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035067	Xkr6	ENSMUST00000120820	ENSMUSP00000112691	TRANSLATION	protein_coding	-	-	1	382	0	0	2.5	298.6	6	-4,-2	-	-	0	MINOR
ENSMUSG00000079410	Gm2897	ENSMUST00000166494	ENSMUSP00000126277	TRANSLATION	protein_coding	-	CCDS49374.1	1	172	0	0	0.5	69.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021907	Msmb	ENSMUST00000130397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021907	Msmb	ENSMUST00000022464	ENSMUSP00000022464	TRANSLATION	protein_coding	-	CCDS36862.1	1	113	0	2.12	0.5	158.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000076888	Traj42	ENSMUST00000103700	ENSMUSP00000143239	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096218	Gm2916	ENSMUST00000181779	ENSMUSP00000138028	TRANSLATION	protein_coding	-	-	5	127	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000096218	Gm2916	ENSMUST00000178392	ENSMUSP00000136852	TRANSLATION	protein_coding	-	-	5	127	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000067995	Gtf2f2	ENSMUST00000088922	ENSMUSP00000086312	TRANSLATION	protein_coding	-	CCDS36981.1	1	249	0	6.58	13.3	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000079269	Gm3676	ENSMUST00000111869	ENSMUSP00000107500	TRANSLATION	protein_coding	-	-	3	184	0	0	0.5	67.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000094619	Trav14d-3-dv8	ENSMUST00000103608	ENSMUSP00000100385	TRANSLATION	TR_V_gene	stop	-	-	120	0	1	0	62.8	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021983	Atp8a2	ENSMUST00000149414	ENSMUSP00000122078	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021983	Atp8a2	ENSMUST00000152688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021983	Atp8a2	ENSMUST00000140924	ENSMUSP00000121469	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021983	Atp8a2	ENSMUST00000131670	ENSMUSP00000119395	TRANSLATION	protein_coding	-	-	2	160	0	0.56	0	93.3	4	-4,-5	-	-	0	MINOR
ENSMUSG00000021983	Atp8a2	ENSMUST00000145071	ENSMUSP00000115592	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	0.56	0	93.3	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000021983	Atp8a2	ENSMUST00000080368	ENSMUSP00000079238	TRANSLATION	protein_coding	-	CCDS27174.1	1	1148	6	8.325	1.5	462.4	10	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000095113	Gm3633	ENSMUST00000163102	ENSMUSP00000126330	TRANSLATION	protein_coding	start/stop	-	5	77	0	0	0	29.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095113	Gm3633	ENSMUST00000100697	ENSMUSP00000098262	TRANSLATION	protein_coding	start	-	5	213	0	0	0	85.4	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000040123	Zmym5	ENSMUST00000225699	ENSMUSP00000153263	TRANSLATION	nonsense_mediated_decay	-	-	-	311	4	1	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040123	Zmym5	ENSMUST00000039812	ENSMUSP00000043625	TRANSLATION	protein_coding	-	CCDS49505.1	1	627	8	1	1.5	62.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040123	Zmym5	ENSMUST00000224498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040123	Zmym5	ENSMUST00000111285	ENSMUSP00000106916	TRANSLATION	protein_coding	-	CCDS49505.1	5	627	8	1	1.5	62.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040123	Zmym5	ENSMUST00000173954	ENSMUSP00000134057	TRANSLATION	protein_coding	-	CCDS49505.1	1	627	8	1	1.5	62.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022022	Mtrf1	ENSMUST00000227610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022022	Mtrf1	ENSMUST00000022600	ENSMUSP00000022600	TRANSLATION	protein_coding	-	CCDS27297.1	1	446	0	6.125	1.5	294	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000096749	Trdd1	ENSMUST00000196221	ENSMUSP00000142546	TRANSLATION	TR_D_gene	start/stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096749	Trdd1	ENSMUST00000179664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053465	Hs6st3	ENSMUST00000065904	ENSMUSP00000070394	TRANSLATION	protein_coding	-	CCDS27339.1	1	470	0	1.8	0.5	270.1	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022112	Gpc5	ENSMUST00000176912	ENSMUSP00000135085	TRANSLATION	protein_coding	-	-	1	645	0	3.24	0	573.6	0	-4,-1	-	-	12	MINOR
ENSMUSG00000022112	Gpc5	ENSMUST00000022707	ENSMUSP00000022707	TRANSLATION	protein_coding	-	CCDS27329.1	1	572	0	3.24	7.5	573.6	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000022112	Gpc5	ENSMUST00000175665	ENSMUSP00000135857	TRANSLATION	protein_coding	-	-	1	498	0	1.96	0.5	451.7	0	-4,-1	-	-	3.438	MINOR
ENSMUSG00000022112	Gpc5	ENSMUST00000176993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072680	Tmem254c	ENSMUST00000184440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072680	Tmem254c	ENSMUST00000100819	ENSMUSP00000098382	TRANSLATION	protein_coding	-	CCDS56940.1	1	123	0	0	7.5	123.1	2	-1,-5	-	-	8.982	PRINCIPAL:1
ENSMUSG00000072680	Tmem254c	ENSMUST00000100818	ENSMUSP00000098381	TRANSLATION	protein_coding	-	CCDS56939.1	1	129	0	0	2.7	123.4	2	-4,-7	-	-	6.786	MINOR
ENSMUSG00000048337	Npy4r	ENSMUST00000052164	ENSMUSP00000056576	TRANSLATION	protein_coding	-	CCDS26933.1	1	375	0	0.48	1.5	161.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000109446	Gm9195	ENSMUST00000208955	ENSMUSP00000146536	TRANSLATION	protein_coding	-	-	5	2805	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000022034	Esco2	ENSMUST00000224162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022034	Esco2	ENSMUST00000131729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022034	Esco2	ENSMUST00000136920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022034	Esco2	ENSMUST00000022613	ENSMUSP00000022613	TRANSLATION	protein_coding	-	CCDS27216.1	1	592	13	4.8	0.5	154.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022034	Esco2	ENSMUST00000225853	ENSMUSP00000153210	TRANSLATION	protein_coding	stop	-	-	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047441	Antxrl	ENSMUST00000226211	ENSMUSP00000153795	TRANSLATION	protein_coding	stop	-	-	120	3	2.1	0	39.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047441	Antxrl	ENSMUST00000058725	ENSMUSP00000052816	TRANSLATION	protein_coding	-	CCDS26931.1	1	641	5	5.6	0.5	207	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000047441	Antxrl	ENSMUST00000227979	ENSMUSP00000153806	TRANSLATION	protein_coding	stop	-	-	49	3	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044551	9930012K11Rik	ENSMUST00000058240	ENSMUSP00000061834	TRANSLATION	protein_coding	-	CCDS36967.1	1	366	0	0	1.5	463.1	0	-4,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000044551	9930012K11Rik	ENSMUST00000153871	ENSMUSP00000122309	TRANSLATION	protein_coding	-	CCDS49535.1	1	365	0	0	1.5	456.7	0	-4,-2	-	-	5.616	ALTERNATIVE:2
ENSMUSG00000044551	9930012K11Rik	ENSMUST00000140152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044551	9930012K11Rik	ENSMUST00000129767	ENSMUSP00000121604	TRANSLATION	nonsense_mediated_decay	start	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044551	9930012K11Rik	ENSMUST00000140314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076901	Traj28	ENSMUST00000103713	ENSMUSP00000143330	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000076877	Traj56	ENSMUST00000103689	ENSMUSP00000142565	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000070448	Vmn2r89	ENSMUST00000161670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070448	Vmn2r89	ENSMUST00000232790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070448	Vmn2r89	ENSMUST00000233023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000070448	Vmn2r89	ENSMUST00000239412	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000070448	Vmn2r89	ENSMUST00000159611	ENSMUSP00000124065	TRANSLATION	protein_coding	-	CCDS49481.1	1	507	0	1.1	0.5	115.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000070448	Vmn2r89	ENSMUST00000159734	ENSMUSP00000124256	TRANSLATION	protein_coding	-	CCDS49482.1	1	432	0	0.8	0.5	112.6	0	0,-3	-	-	10.182	MINOR
ENSMUSG00000071540	3425401B19Rik	ENSMUST00000226958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071540	3425401B19Rik	ENSMUST00000096038	ENSMUSP00000093741	TRANSLATION	protein_coding	-	CCDS49437.1	1	1412	0	0	0.5	89.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022090	Pdlim2	ENSMUST00000022681	ENSMUSP00000022681	TRANSLATION	protein_coding	-	CCDS27248.1	1	349	9	3.85	1.5	137	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022090	Pdlim2	ENSMUST00000135944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022090	Pdlim2	ENSMUST00000127836	ENSMUSP00000141050	TRANSLATION	protein_coding	-	-	5	128	9	1.4	0	36.5	0	-4,-1	-	-	7.098	MINOR
ENSMUSG00000022090	Pdlim2	ENSMUST00000125300	ENSMUSP00000116694	TRANSLATION	protein_coding	start	-	3	151	9	1.4	0	75.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022090	Pdlim2	ENSMUST00000129174	ENSMUSP00000139820	TRANSLATION	protein_coding	-	-	2	128	9	1.4	0	36.5	0	-4,-1	-	-	7.098	MINOR
ENSMUSG00000022090	Pdlim2	ENSMUST00000143393	ENSMUSP00000119222	TRANSLATION	protein_coding	stop	-	5	217	0	2.45	0	61.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022090	Pdlim2	ENSMUST00000141363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022090	Pdlim2	ENSMUST00000138792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022090	Pdlim2	ENSMUST00000123125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022090	Pdlim2	ENSMUST00000153735	ENSMUSP00000116200	TRANSLATION	protein_coding	-	CCDS27248.1	5	349	9	3.85	1.5	137	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021933	Gucy1b2	ENSMUST00000165651	ENSMUSP00000128114	TRANSLATION	protein_coding	-	CCDS56962.1	1	809	29	8.25	0.5	569.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021933	Gucy1b2	ENSMUST00000022501	ENSMUSP00000022501	TRANSLATION	protein_coding	-	CCDS27190.1	1	824	29	8.25	0.5	569.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021933	Gucy1b2	ENSMUST00000128573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095958	Trav12-3	ENSMUST00000103657	ENSMUSP00000100434	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	40	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022136	Dnajc3	ENSMUST00000022734	ENSMUSP00000022734	TRANSLATION	protein_coding	-	CCDS37012.1	1	504	0	10.23	7.6	152.2	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000057156	Homez	ENSMUST00000176259	ENSMUSP00000135648	TRANSLATION	protein_coding	start	-	2	162	0	0.6	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057156	Homez	ENSMUST00000142283	ENSMUSP00000117828	TRANSLATION	protein_coding	-	CCDS27102.1	1	518	0	0.6	0.5	121.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057156	Homez	ENSMUST00000081162	ENSMUSP00000079929	TRANSLATION	protein_coding	-	CCDS27102.1	1	518	0	0.6	0.5	121.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057156	Homez	ENSMUST00000146642	ENSMUSP00000114619	TRANSLATION	protein_coding	stop	-	2	114	0	0	0	21.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053815	Olfr744	ENSMUST00000216690	ENSMUSP00000148954	TRANSLATION	protein_coding	-	CCDS27019.1	5	323	0	0.32	0.5	163.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053815	Olfr744	ENSMUST00000066457	ENSMUSP00000066496	TRANSLATION	protein_coding	-	CCDS27019.1	-	323	0	0.32	0.5	163.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053815	Olfr744	ENSMUST00000213668	ENSMUSP00000149164	TRANSLATION	protein_coding	-	CCDS27019.1	5	323	0	0.32	0.5	163.1	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000076885	Traj45	ENSMUST00000103697	ENSMUSP00000143118	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096531	Trav12n-2	ENSMUST00000103619	ENSMUSP00000100396	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	45.3	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096531	Trav12n-2	ENSMUST00000196674	ENSMUSP00000143168	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	45.3	0	3,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021747	4930452B06Rik	ENSMUST00000102996	ENSMUSP00000100061	TRANSLATION	protein_coding	-	CCDS26814.1	1	674	0	0	0.5	138.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021747	4930452B06Rik	ENSMUST00000225744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096446	Gm8104	ENSMUST00000168165	ENSMUSP00000132509	TRANSLATION	protein_coding	-	-	5	198	0	0	0.5	84.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094176	Trav6d-6	ENSMUST00000197754	ENSMUSP00000143439	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	47.8	0	1,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094779	Trav13n-2	ENSMUST00000196941	ENSMUSP00000143076	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	50.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094779	Trav13n-2	ENSMUST00000103622	ENSMUSP00000100399	TRANSLATION	TR_V_gene	start/stop	-	-	88	0	1	0	50.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000035121	Neil2	ENSMUST00000038229	ENSMUSP00000045200	TRANSLATION	protein_coding	-	CCDS36949.1	1	329	7	2.52	1.5	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035121	Neil2	ENSMUST00000226002	ENSMUSP00000152963	TRANSLATION	protein_coding	stop	-	-	306	1	1.96	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035121	Neil2	ENSMUST00000225841	ENSMUSP00000153441	TRANSLATION	nonsense_mediated_decay	-	-	-	277	1	1.96	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035121	Neil2	ENSMUST00000225157	ENSMUSP00000153633	TRANSLATION	protein_coding	stop	-	-	132	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035121	Neil2	ENSMUST00000223723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054733	Msra	ENSMUST00000209513	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054733	Msra	ENSMUST00000210428	ENSMUSP00000147689	TRANSLATION	protein_coding	-	CCDS84147.1	1	191	9	4.5	5.3	218.3	0	-4,-6	-	-	18.018	MINOR
ENSMUSG00000054733	Msra	ENSMUST00000209392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054733	Msra	ENSMUST00000067927	ENSMUSP00000065754	TRANSLATION	protein_coding	-	CCDS27209.1	1	233	9	5.5	5.1	218.3	0	-4,0	-	-	19.923	PRINCIPAL:1
ENSMUSG00000054733	Msra	ENSMUST00000210363	ENSMUSP00000148189	TRANSLATION	protein_coding	-	CCDS84146.1	5	169	9	4	7.4	218.3	0	-4,-7	-	-	18	MINOR
ENSMUSG00000046753	Ccdc66	ENSMUST00000223689	ENSMUSP00000153023	TRANSLATION	protein_coding	-	CCDS36843.1	-	935	0	0	0.5	151.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000046753	Ccdc66	ENSMUST00000224837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046753	Ccdc66	ENSMUST00000050480	ENSMUSP00000052546	TRANSLATION	protein_coding	-	-	1	779	0	0	0.5	151.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000076928	Trac	ENSMUST00000103740	ENSMUSP00000100459	TRANSLATION	TR_C_gene	start	-	-	137	0	2.1	0	123.4	1	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076928	Trac	ENSMUST00000198398	ENSMUSP00000143014	TRANSLATION	TR_C_gene	start	-	-	137	0	2.1	0	123.4	1	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076895	Traj34	ENSMUST00000103707	ENSMUSP00000143621	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0.5	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091754	Gm3636	ENSMUST00000163850	ENSMUSP00000125896	TRANSLATION	protein_coding	-	-	5	227	0	0	0.5	72.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091754	Gm3636	ENSMUST00000100904	ENSMUSP00000098464	TRANSLATION	protein_coding	-	CCDS84086.1	1	172	0	0	0.5	66.8	0	-4,-5	-	-	5.496	PRINCIPAL:2
ENSMUSG00000022211	Carmil3	ENSMUST00000226757	ENSMUSP00000154517	TRANSLATION	nonsense_mediated_decay	-	-	-	235	0	3.41	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022211	Carmil3	ENSMUST00000227563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000227070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022211	Carmil3	ENSMUST00000228760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000228877	ENSMUSP00000153889	TRANSLATION	nonsense_mediated_decay	-	-	-	121	0	2.62	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022211	Carmil3	ENSMUST00000226388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000076236	ENSMUSP00000075587	TRANSLATION	protein_coding	-	CCDS36930.1	2	1375	0	16.24	3.9	274.6	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000022211	Carmil3	ENSMUST00000227312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000228497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000226446	ENSMUSP00000154051	TRANSLATION	nonsense_mediated_decay	start	-	-	145	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022211	Carmil3	ENSMUST00000226653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022211	Carmil3	ENSMUST00000227088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095756	Trav6d-7	ENSMUST00000178650	ENSMUSP00000137604	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.4	0	45.3	0	2,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022216	Psme1	ENSMUST00000174148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000174484	ENSMUSP00000133883	TRANSLATION	protein_coding	stop	-	3	238	0	6.98	0	275.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022216	Psme1	ENSMUST00000174419	ENSMUSP00000133791	TRANSLATION	nonsense_mediated_decay	start	-	3	42	0	1.49	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022216	Psme1	ENSMUST00000172738	ENSMUSP00000133867	TRANSLATION	protein_coding	-	-	5	226	0	6.494	0	203.3	0	-4,-5	-	-	5.406	MINOR
ENSMUSG00000022216	Psme1	ENSMUST00000174791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000173388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000173544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000174259	ENSMUSP00000134735	TRANSLATION	protein_coding	-	CCDS36931.1	1	249	0	7.244	6.3	288.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022216	Psme1	ENSMUST00000174563	ENSMUSP00000133366	TRANSLATION	protein_coding	stop	-	3	173	0	5.07	0	145.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022216	Psme1	ENSMUST00000173113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000228834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000172941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022216	Psme1	ENSMUST00000089619	ENSMUSP00000087046	TRANSLATION	protein_coding	-	-	5	236	0	6.744	1.2	252.9	0	-4,-5	-	-	8.956	MINOR
ENSMUSG00000094370	Gm3373	ENSMUST00000177556	ENSMUSP00000135906	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	76.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094370	Gm3373	ENSMUST00000169087	ENSMUSP00000130132	TRANSLATION	protein_coding	-	-	1	171	0	0	0	76.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000095304	Plac9a	ENSMUST00000183725	ENSMUSP00000139368	TRANSLATION	protein_coding	-	-	3	47	0	0	0	89.3	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000095304	Plac9a	ENSMUST00000183431	ENSMUSP00000139157	TRANSLATION	protein_coding	-	-	3	47	0	0	0	89.3	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000095304	Plac9a	ENSMUST00000052286	ENSMUSP00000056665	TRANSLATION	protein_coding	-	CCDS36832.1	1	108	0	0	0.5	135.1	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000076831	Trav8-1	ENSMUST00000103643	ENSMUSP00000100420	TRANSLATION	TR_V_gene	stop	-	-	109	0	1	0	64	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021893	Capn7	ENSMUST00000152182	ENSMUSP00000119214	TRANSLATION	nonsense_mediated_decay	-	-	1	508	0	3.065	0	207.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021893	Capn7	ENSMUST00000228237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021893	Capn7	ENSMUST00000143472	ENSMUSP00000118596	TRANSLATION	nonsense_mediated_decay	-	-	5	508	0	3.065	0	207.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021893	Capn7	ENSMUST00000022451	ENSMUSP00000022451	TRANSLATION	protein_coding	-	CCDS26911.1	1	813	0	8.275	7.5	284.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096615	Trav11	ENSMUST00000103585	ENSMUSP00000100362	TRANSLATION	TR_V_gene	stop	-	-	114	3	1	0	49.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021811	Dnajc9	ENSMUST00000223844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021811	Dnajc9	ENSMUST00000022345	ENSMUSP00000022345	TRANSLATION	protein_coding	-	CCDS26844.1	1	259	0	1.4	1.5	63.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021811	Dnajc9	ENSMUST00000223889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021811	Dnajc9	ENSMUST00000223950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076862	Trav19	ENSMUST00000103674	ENSMUSP00000100451	TRANSLATION	TR_V_gene	stop	-	-	119	0	1	0	63.3	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000052584	Serp2	ENSMUST00000228055	ENSMUSP00000154499	TRANSLATION	protein_coding	-	-	-	36	0	0	0	34	0	-4,-2	-	-	1.68	MINOR
ENSMUSG00000052584	Serp2	ENSMUST00000228524	ENSMUSP00000154586	TRANSLATION	protein_coding	stop	-	-	53	0	0	0	32.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052584	Serp2	ENSMUST00000064517	ENSMUSP00000068508	TRANSLATION	protein_coding	-	CCDS49546.1	1	65	0	0	19.5	106	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000052584	Serp2	ENSMUST00000227076	ENSMUSP00000154122	TRANSLATION	nonsense_mediated_decay	-	-	-	53	0	0	0	86.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052584	Serp2	ENSMUST00000227957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022123	Scel	ENSMUST00000227322	ENSMUSP00000154402	TRANSLATION	protein_coding	-	-	-	632	8	0	0	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000022123	Scel	ENSMUST00000095576	ENSMUSP00000093233	TRANSLATION	protein_coding	-	CCDS37002.1	1	652	8	0	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000114852	Gm47189	ENSMUST00000226078	ENSMUSP00000153414	TRANSLATION	protein_coding	-	-	-	184	0	0	0.5	63.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021798	Ldb3	ENSMUST00000090040	ENSMUSP00000087494	TRANSLATION	protein_coding	-	CCDS36879.1	1	684	23	5.4	1.5	291.9	0	-4,-6	-	-	18.185	ALTERNATIVE:2
ENSMUSG00000021798	Ldb3	ENSMUST00000227819	ENSMUSP00000154119	TRANSLATION	protein_coding	-	-	-	288	0	2.15	3.7	151.6	0	-4,-6	-	-	1	MINOR
ENSMUSG00000021798	Ldb3	ENSMUST00000228044	ENSMUSP00000154758	TRANSLATION	protein_coding	-	-	-	622	23	5.4	1.5	291.9	0	-4,-6	-	-	18.185	ALTERNATIVE:2
ENSMUSG00000021798	Ldb3	ENSMUST00000226226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021798	Ldb3	ENSMUST00000022330	ENSMUSP00000022330	TRANSLATION	protein_coding	-	CCDS26942.1	1	327	0	2.15	2.7	134.1	0	-4,-6	-	-	0.63	MINOR
ENSMUSG00000021798	Ldb3	ENSMUST00000022327	ENSMUSP00000022327	TRANSLATION	protein_coding	-	CCDS26941.1	1	723	23	5.4	1.5	274.4	0	-4,-6	-	-	17.135	PRINCIPAL:4
ENSMUSG00000021798	Ldb3	ENSMUST00000022328	ENSMUSP00000022328	TRANSLATION	protein_coding	-	CCDS26940.1	1	661	23	5.4	1.5	274.4	0	-4,-6	-	-	17.135	ALTERNATIVE:2
ENSMUSG00000021798	Ldb3	ENSMUST00000064098	ENSMUSP00000066784	TRANSLATION	protein_coding	-	CCDS36878.1	1	679	23	5.4	1.5	288.8	0	-4,-6	-	-	17.999	ALTERNATIVE:2
ENSMUSG00000022052	Ppp2r2a	ENSMUST00000225469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022052	Ppp2r2a	ENSMUST00000225251	ENSMUSP00000153452	TRANSLATION	nonsense_mediated_decay	-	-	-	50	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022052	Ppp2r2a	ENSMUST00000223630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022052	Ppp2r2a	ENSMUST00000089230	ENSMUSP00000086640	TRANSLATION	protein_coding	-	CCDS56967.1	1	447	0	8.75	18.2	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022052	Ppp2r2a	ENSMUST00000225380	ENSMUSP00000153191	TRANSLATION	protein_coding	-	-	-	367	0	7.75	0.5	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000063821	Dupd1	ENSMUST00000073870	ENSMUSP00000073534	TRANSLATION	protein_coding	-	CCDS26863.1	1	215	8	3	1.5	93.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063821	Dupd1	ENSMUST00000224735	ENSMUSP00000153223	TRANSLATION	protein_coding	-	-	-	168	1	2.18	0	0	0	-4,-5	-	-	5.112	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000227865	ENSMUSP00000154777	TRANSLATION	protein_coding	stop	-	-	119	3	2.99	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000046191	ENSMUSP00000042860	TRANSLATION	protein_coding	-	CCDS26976.1	1	184	24	4.49	15.5	40.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037722	Gnpnat1	ENSMUST00000226590	ENSMUSP00000154025	TRANSLATION	protein_coding	stop	-	-	51	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000228304	ENSMUSP00000154299	TRANSLATION	protein_coding	stop	-	-	107	0	2.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000228003	ENSMUSP00000154780	TRANSLATION	protein_coding	stop	-	-	63	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000227468	ENSMUSP00000154084	TRANSLATION	protein_coding	-	CCDS26976.1	-	184	24	4.49	15.5	40.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037722	Gnpnat1	ENSMUST00000226973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037722	Gnpnat1	ENSMUST00000228451	ENSMUSP00000154138	TRANSLATION	protein_coding	start	-	-	135	24	3.325	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000226276	ENSMUSP00000154382	TRANSLATION	protein_coding	-	-	-	206	24	4.49	0	39.7	0	-4,-5	-	-	17.88	MINOR
ENSMUSG00000037722	Gnpnat1	ENSMUST00000226856	ENSMUSP00000154590	TRANSLATION	protein_coding	stop	-	-	112	3	2.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096329	Trav13d-4	ENSMUST00000196079	ENSMUSP00000143340	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	55.4	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096329	Trav13d-4	ENSMUST00000103607	ENSMUSP00000100384	TRANSLATION	TR_V_gene	start/stop	-	-	88	0	1	0	55	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000059488	Olfr727	ENSMUST00000215317	ENSMUSP00000149886	TRANSLATION	protein_coding	-	CCDS27003.1	5	324	0	0.36	6.4	163	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000059488	Olfr727	ENSMUST00000079142	ENSMUSP00000078145	TRANSLATION	protein_coding	-	CCDS27003.1	-	324	0	0.36	6.4	163	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000053453	Thoc7	ENSMUST00000225559	ENSMUSP00000153618	TRANSLATION	nonsense_mediated_decay	start	-	-	122	0	0	0	120.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053453	Thoc7	ENSMUST00000225891	ENSMUSP00000153560	TRANSLATION	protein_coding	stop	-	-	169	0	0	0	117.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053453	Thoc7	ENSMUST00000224015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053453	Thoc7	ENSMUST00000225317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053453	Thoc7	ENSMUST00000224652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053453	Thoc7	ENSMUST00000065865	ENSMUSP00000065819	TRANSLATION	protein_coding	-	CCDS49403.1	1	204	0	0	11.8	135.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000053453	Thoc7	ENSMUST00000225401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053453	Thoc7	ENSMUST00000225202	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053453	Thoc7	ENSMUST00000226008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053453	Thoc7	ENSMUST00000224764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053453	Thoc7	ENSMUST00000225325	ENSMUSP00000153123	TRANSLATION	protein_coding	-	-	-	200	0	0	4	135.5	0	-4,-5	-	-	6.834	MINOR
ENSMUSG00000053453	Thoc7	ENSMUST00000224392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053453	Thoc7	ENSMUST00000223832	ENSMUSP00000152983	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053453	Thoc7	ENSMUST00000225590	ENSMUSP00000153276	TRANSLATION	nonsense_mediated_decay	start	-	-	106	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091873	Olfr732	ENSMUST00000071208	ENSMUSP00000071195	TRANSLATION	protein_coding	-	CCDS27008.1	-	308	0	0.2	8.8	151.9	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000091873	Olfr732	ENSMUST00000213701	ENSMUSP00000148984	TRANSLATION	protein_coding	-	CCDS27008.1	5	308	0	0.2	8.8	151.9	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022010	Tsc22d1	ENSMUST00000110888	ENSMUSP00000106513	TRANSLATION	protein_coding	-	CCDS79344.1	1	995	0	1	0.5	102.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000048371	ENSMUSP00000044517	TRANSLATION	protein_coding	-	CCDS27285.2	1	1077	0	1	0.5	102.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000142683	ENSMUSP00000135493	TRANSLATION	protein_coding	-	CCDS79345.1	3	86	0	1	8.6	102.4	0	-4,-5	-	-	14.328	ALTERNATIVE:1
ENSMUSG00000022010	Tsc22d1	ENSMUST00000175984	ENSMUSP00000135307	TRANSLATION	nonsense_mediated_decay	start	-	3	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000022587	ENSMUSP00000022587	TRANSLATION	protein_coding	-	CCDS27286.1	1	143	0	1	10.8	102.4	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000022010	Tsc22d1	ENSMUST00000176886	ENSMUSP00000135202	TRANSLATION	nonsense_mediated_decay	start	-	5	128	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000177207	ENSMUSP00000135296	TRANSLATION	protein_coding	-	CCDS79345.1	3	86	0	1	8.6	102.4	0	-4,-5	-	-	14.328	ALTERNATIVE:1
ENSMUSG00000022010	Tsc22d1	ENSMUST00000101618	ENSMUSP00000099140	TRANSLATION	protein_coding	-	CCDS49545.1	1	107	0	1	0.5	102.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000176581	ENSMUSP00000135789	TRANSLATION	protein_coding	start/stop	-	5	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000140251	ENSMUSP00000135806	TRANSLATION	protein_coding	-	CCDS79345.1	2	86	0	1	8.6	102.4	0	-4,-5	-	-	14.328	ALTERNATIVE:1
ENSMUSG00000022010	Tsc22d1	ENSMUST00000134109	ENSMUSP00000135146	TRANSLATION	protein_coding	-	-	2	82	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000177333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022010	Tsc22d1	ENSMUST00000175655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022010	Tsc22d1	ENSMUST00000133224	ENSMUSP00000135561	TRANSLATION	protein_coding	-	CCDS79345.1	2	86	0	1	8.6	102.4	0	-4,-5	-	-	14.328	ALTERNATIVE:1
ENSMUSG00000022010	Tsc22d1	ENSMUST00000177471	ENSMUSP00000134792	TRANSLATION	nonsense_mediated_decay	start	-	5	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022010	Tsc22d1	ENSMUST00000175811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072115	Ang	ENSMUST00000171688	ENSMUSP00000132084	TRANSLATION	protein_coding	-	CCDS27034.1	1	145	5	1	2.7	122.4	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000072115	Ang	ENSMUST00000069011	ENSMUSP00000067434	TRANSLATION	protein_coding	-	CCDS27034.1	1	145	5	1	2.7	122.4	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000022057	Adamdec1	ENSMUST00000022641	ENSMUSP00000022641	TRANSLATION	protein_coding	-	CCDS49532.1	1	467	10	5.35	1.5	281.4	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000044703	Phf11a	ENSMUST00000062307	ENSMUSP00000053146	TRANSLATION	protein_coding	-	CCDS27169.1	1	293	8	1.68	0.5	67.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000076919	Traj9	ENSMUST00000103731	ENSMUSP00000142928	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091114	Gm3138	ENSMUST00000165431	ENSMUSP00000132947	TRANSLATION	protein_coding	-	-	5	218	0	0	0	83.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063410	Stk24	ENSMUST00000227917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063410	Stk24	ENSMUST00000226161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063410	Stk24	ENSMUST00000226158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063410	Stk24	ENSMUST00000227273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063410	Stk24	ENSMUST00000079817	ENSMUSP00000078746	TRANSLATION	protein_coding	-	CCDS37016.1	1	431	19	6	12.3	240.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000043681	Fam25c	ENSMUST00000052126	ENSMUSP00000063140	TRANSLATION	protein_coding	-	CCDS36875.1	1	89	0	0	7.5	121.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000053961	Ang5	ENSMUST00000066719	ENSMUSP00000067008	TRANSLATION	protein_coding	-	CCDS56951.1	1	145	5	1	3.9	120.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000053961	Ang5	ENSMUST00000226667	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000223927	ENSMUSP00000153588	TRANSLATION	protein_coding	-	CCDS36805.1	-	90	0	0	0.5	100.4	0	-4,-5	-	-	2.904	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225640	ENSMUSP00000153272	TRANSLATION	protein_coding	stop	-	-	55	0	0	0	68.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225847	ENSMUSP00000153505	TRANSLATION	protein_coding	start	-	-	89	0	0	0	68.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000224223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000112669	ENSMUSP00000108288	TRANSLATION	protein_coding	-	CCDS36805.1	1	90	0	0	0.5	100.4	0	-4,-5	-	-	2.904	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000163392	ENSMUSP00000126960	TRANSLATION	protein_coding	-	CCDS26817.1	1	127	0	0	3.9	152	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000223702	ENSMUSP00000153330	TRANSLATION	protein_coding	-	-	-	135	0	0	0	116.2	0	-4,0	-	-	3.852	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225773	ENSMUSP00000153288	TRANSLATION	protein_coding	-	-	-	109	0	0	0	69.7	0	-4,-6	-	-	1.062	MINOR
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000223697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000223762	ENSMUSP00000153287	TRANSLATION	protein_coding	-	CCDS26817.1	-	127	0	0	3.9	152	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225294	ENSMUSP00000153402	TRANSLATION	protein_coding	-	CCDS26817.1	-	127	0	0	3.9	152	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000224389	ENSMUSP00000153430	TRANSLATION	protein_coding	-	CCDS26817.1	-	127	0	0	3.9	152	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000224994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000224824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000225383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033111	3830406C13Rik	ENSMUST00000223631	ENSMUSP00000153352	TRANSLATION	protein_coding	-	CCDS36805.1	-	90	0	0	0.5	100.4	0	-4,-5	-	-	2.904	MINOR
ENSMUSG00000093863	Gm7954	ENSMUST00000164967	ENSMUSP00000128216	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000022156	Gzme	ENSMUST00000089549	ENSMUSP00000086978	TRANSLATION	protein_coding	-	CCDS27143.1	1	248	7	4.15	0.5	190.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022032	Scara5	ENSMUST00000154373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022032	Scara5	ENSMUST00000022610	ENSMUSP00000022610	TRANSLATION	protein_coding	-	CCDS27214.1	1	491	4	3.075	1.5	143.2	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022032	Scara5	ENSMUST00000069226	ENSMUSP00000063391	TRANSLATION	protein_coding	-	CCDS49523.1	1	387	0	1.075	0.5	35.4	1	-4,-5	-	-	1.998	MINOR
ENSMUSG00000051506	Wdfy4	ENSMUST00000159606	ENSMUSP00000124728	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051506	Wdfy4	ENSMUST00000130509	ENSMUSP00000117068	TRANSLATION	protein_coding	-	-	5	3183	0	8.43	0.5	465.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051506	Wdfy4	ENSMUST00000061753	ENSMUSP00000057556	TRANSLATION	protein_coding	-	CCDS49441.1	5	3024	0	8.43	0.5	465.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000051506	Wdfy4	ENSMUST00000132153	ENSMUSP00000120118	TRANSLATION	protein_coding	start	-	3	60	0	0.69	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096839	Gm3460	ENSMUST00000178927	ENSMUSP00000137321	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096839	Gm3460	ENSMUST00000167882	ENSMUSP00000128458	TRANSLATION	protein_coding	-	-	5	215	0	0	0.5	73.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079388	2610042L04Rik	ENSMUST00000165466	ENSMUSP00000132127	TRANSLATION	protein_coding	-	CCDS84074.1	1	150	0	0	0.5	69.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079388	2610042L04Rik	ENSMUST00000112778	ENSMUSP00000108398	TRANSLATION	protein_coding	-	CCDS84074.1	1	150	0	0	0.5	69.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096463	Gm21750	ENSMUST00000098874	ENSMUSP00000096471	TRANSLATION	protein_coding	start/stop	-	-	499	9	0.6	0	48.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072676	Tmem254a	ENSMUST00000100813	ENSMUSP00000098376	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	40.7	1	-1,-6	-	-	-1	MINOR
ENSMUSG00000072676	Tmem254a	ENSMUST00000100811	ENSMUSP00000098374	TRANSLATION	protein_coding	-	CCDS26876.1	1	129	0	0	2.7	123.4	2	-4,-7	-	-	6.786	MINOR
ENSMUSG00000072676	Tmem254a	ENSMUST00000185006	ENSMUSP00000139270	TRANSLATION	protein_coding	-	CCDS49420.1	1	123	0	0	7.5	123.1	2	-1,-5	-	-	8.982	PRINCIPAL:1
ENSMUSG00000072676	Tmem254a	ENSMUST00000184129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076865	Trdv2-1	ENSMUST00000197130	ENSMUSP00000143506	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.1	0	62.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000076865	Trdv2-1	ENSMUST00000103677	ENSMUSP00000100454	TRANSLATION	TR_V_gene	stop	-	-	115	0	1.1	0	62.8	0	1,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076918	Traj11	ENSMUST00000103730	ENSMUSP00000142663	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000048582	Gja3	ENSMUST00000223792	ENSMUSP00000152898	TRANSLATION	protein_coding	stop	-	-	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048582	Gja3	ENSMUST00000061614	ENSMUSP00000059587	TRANSLATION	protein_coding	-	CCDS27152.1	1	417	0	1.23	1.5	334	0	-2,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022209	Dhrs2	ENSMUST00000022820	ENSMUSP00000022820	TRANSLATION	protein_coding	-	CCDS27110.1	1	282	30	6.15	1.5	169.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000022209	Dhrs2	ENSMUST00000165432	ENSMUSP00000129115	TRANSLATION	protein_coding	-	CCDS27110.1	5	282	30	6.15	1.5	169.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000052417	Olfr720	ENSMUST00000216079	ENSMUSP00000149975	TRANSLATION	protein_coding	-	CCDS26825.1	5	316	0	0.36	2.7	164.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052417	Olfr720	ENSMUST00000206298	ENSMUSP00000146132	TRANSLATION	protein_coding	-	CCDS26825.1	3	316	0	0.36	2.7	164.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052417	Olfr720	ENSMUST00000217642	ENSMUSP00000149641	TRANSLATION	protein_coding	-	CCDS26825.1	5	316	0	0.36	2.7	164.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052417	Olfr720	ENSMUST00000035250	ENSMUSP00000046509	TRANSLATION	protein_coding	-	CCDS26825.1	-	316	0	0.36	2.7	164.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006281	Tep1	ENSMUST00000226222	ENSMUSP00000154505	TRANSLATION	protein_coding	start	-	-	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006281	Tep1	ENSMUST00000227228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006281	Tep1	ENSMUST00000006444	ENSMUSP00000006444	TRANSLATION	protein_coding	-	CCDS36907.1	1	2629	7	11.44	0.5	960.7	0	-4,-5	-	-	17.25	PRINCIPAL:1
ENSMUSG00000006281	Tep1	ENSMUST00000226789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006281	Tep1	ENSMUST00000226430	ENSMUSP00000154492	TRANSLATION	nonsense_mediated_decay	start	-	-	489	8	0	0	70.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006281	Tep1	ENSMUST00000227193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006281	Tep1	ENSMUST00000228562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006281	Tep1	ENSMUST00000227526	ENSMUSP00000153878	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000100241	Slc18a3	ENSMUST00000191501	ENSMUSP00000139829	TRANSLATION	protein_coding	-	CCDS79291.1	-	530	0	0	3.9	107.2	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000037572	Wdhd1	ENSMUST00000227041	ENSMUSP00000154026	TRANSLATION	protein_coding	start/stop	-	-	67	0	1	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037572	Wdhd1	ENSMUST00000111790	ENSMUSP00000107420	TRANSLATION	protein_coding	-	-	2	641	0	13.25	0	332.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000037572	Wdhd1	ENSMUST00000139124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037572	Wdhd1	ENSMUST00000111792	ENSMUSP00000107422	TRANSLATION	protein_coding	-	-	5	1081	0	18.3	0.5	444	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000037572	Wdhd1	ENSMUST00000228810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037572	Wdhd1	ENSMUST00000187531	ENSMUSP00000141182	TRANSLATION	protein_coding	-	-	5	1118	0	19.3	1.5	444	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000089682	Bcl2l2	ENSMUST00000133397	ENSMUSP00000116385	TRANSLATION	protein_coding	-	-	1	178	0	1.75	0	145.6	0	-4,-6	-	-	9.816	MINOR
ENSMUSG00000089682	Bcl2l2	ENSMUST00000227108	ENSMUSP00000154395	TRANSLATION	protein_coding	stop	-	-	117	0	1	0	107.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000089682	Bcl2l2	ENSMUST00000022806	ENSMUSP00000022806	TRANSLATION	protein_coding	-	CCDS27103.1	1	193	0	2.75	8.8	145.6	2	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000089682	Bcl2l2	ENSMUST00000131243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089682	Bcl2l2	ENSMUST00000172844	ENSMUSP00000133286	TRANSLATION	protein_coding	-	-	5	79	0	1.75	0	0	2	-4,-7	-	-	3.816	MINOR
ENSMUSG00000048349	Pou4f1	ENSMUST00000053016	ENSMUSP00000060798	TRANSLATION	protein_coding	-	CCDS27319.1	1	421	0	0.6	4.1	166.1	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000048349	Pou4f1	ENSMUST00000139505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021767	Kat6b	ENSMUST00000226589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021767	Kat6b	ENSMUST00000183055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021767	Kat6b	ENSMUST00000112458	ENSMUSP00000108077	TRANSLATION	protein_coding	-	-	5	179	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021767	Kat6b	ENSMUST00000182964	ENSMUSP00000138421	TRANSLATION	protein_coding	-	-	5	1872	41	9.55	0.5	340.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021767	Kat6b	ENSMUST00000183228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021767	Kat6b	ENSMUST00000096222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021767	Kat6b	ENSMUST00000182996	ENSMUSP00000138746	TRANSLATION	protein_coding	stop	-	2	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021767	Kat6b	ENSMUST00000183201	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021767	Kat6b	ENSMUST00000182732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021767	Kat6b	ENSMUST00000182855	ENSMUSP00000138511	TRANSLATION	protein_coding	-	CCDS59615.1	1	1763	41	9.55	0.5	340.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000021767	Kat6b	ENSMUST00000238837	ENSMUSP00000159058	TRANSLATION	protein_coding	-	-	-	2054	41	9.55	0.5	340.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021767	Kat6b	ENSMUST00000069648	ENSMUSP00000066693	TRANSLATION	protein_coding	-	-	5	1872	41	9.55	0.5	340.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021767	Kat6b	ENSMUST00000182859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021767	Kat6b	ENSMUST00000182405	ENSMUSP00000138377	TRANSLATION	protein_coding	-	CCDS59615.1	1	1763	41	9.55	0.5	340.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035184	Fam124a	ENSMUST00000039064	ENSMUSP00000047681	TRANSLATION	protein_coding	-	CCDS56963.1	5	536	0	0	1.5	349	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035184	Fam124a	ENSMUST00000161899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035184	Fam124a	ENSMUST00000160745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035184	Fam124a	ENSMUST00000162987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042682	Selenok	ENSMUST00000112268	ENSMUSP00000107887	TRANSLATION	protein_coding	-	CCDS36844.1	1	94	0	0	8.8	101.2	2	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000042682	Selenok	ENSMUST00000133229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042682	Selenok	ENSMUST00000223998	ENSMUSP00000153053	TRANSLATION	nonsense_mediated_decay	-	-	-	40	0	0	0	47.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000015441	Gzmf	ENSMUST00000022757	ENSMUSP00000022757	TRANSLATION	protein_coding	-	CCDS36936.1	1	248	7	4.12	0.5	209.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000096129	Trav12d-2	ENSMUST00000197007	ENSMUSP00000142977	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	45.3	0	3,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096129	Trav12d-2	ENSMUST00000103593	ENSMUSP00000100370	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	45.3	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096397	Trav17	ENSMUST00000103672	ENSMUSP00000100449	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	50.6	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000096397	Trav17	ENSMUST00000186545	ENSMUSP00000140087	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	50.6	0	2,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021940	Ptpn20	ENSMUST00000022508	ENSMUSP00000022508	TRANSLATION	protein_coding	-	CCDS36870.1	1	426	11	4.9	0.5	267.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021940	Ptpn20	ENSMUST00000227887	ENSMUSP00000154272	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021940	Ptpn20	ENSMUST00000226512	ENSMUSP00000153829	TRANSLATION	nonsense_mediated_decay	-	-	-	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095528	Gm10375	ENSMUST00000228350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095528	Gm10375	ENSMUST00000163970	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000095528	Gm10375	ENSMUST00000100692	ENSMUSP00000098257	TRANSLATION	protein_coding	-	CCDS49460.1	1	169	0	0	0.5	63.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000090690	Gm8020	ENSMUST00000170174	ENSMUSP00000132236	TRANSLATION	protein_coding	start	-	5	229	0	0	0	86.2	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000043418	Lrit2	ENSMUST00000057176	ENSMUSP00000056642	TRANSLATION	protein_coding	-	CCDS26951.1	1	549	0	0.8	0.5	134.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000043418	Lrit2	ENSMUST00000224104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047977	Synb	ENSMUST00000059362	ENSMUSP00000061107	TRANSLATION	protein_coding	-	CCDS27239.1	1	618	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000021918	Nek4	ENSMUST00000050171	ENSMUSP00000057915	TRANSLATION	protein_coding	-	-	1	737	12	5	0	193.3	0	-1,-5	-	-	9.096	MINOR
ENSMUSG00000021918	Nek4	ENSMUST00000228392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021918	Nek4	ENSMUST00000227199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021918	Nek4	ENSMUST00000228328	ENSMUSP00000154090	TRANSLATION	protein_coding	-	CCDS26902.1	-	792	21	5.5	1.5	225	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000021918	Nek4	ENSMUST00000226833	ENSMUSP00000154606	TRANSLATION	protein_coding	-	-	-	274	21	5.1	0	225	0	-4,-6	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000021918	Nek4	ENSMUST00000226551	ENSMUSP00000154678	TRANSLATION	protein_coding	-	-	-	744	21	5.5	0.5	225	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000021918	Nek4	ENSMUST00000226146	ENSMUSP00000153710	TRANSLATION	protein_coding	start	-	-	630	3	3.2	0	95	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021918	Nek4	ENSMUST00000227602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096900	Trav9-1	ENSMUST00000103581	ENSMUSP00000100358	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	54.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021996	Esd	ENSMUST00000176957	ENSMUSP00000135394	TRANSLATION	protein_coding	-	CCDS70603.1	1	295	9	7.99	0.5	239.5	0	-4,0	-	-	18	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000177137	ENSMUSP00000135818	TRANSLATION	protein_coding	-	-	5	259	7	7.16	0	222.4	0	-4,-2	-	-	13.98	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000177445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021996	Esd	ENSMUST00000022573	ENSMUSP00000022573	TRANSLATION	protein_coding	-	CCDS36975.1	1	282	9	7.99	17.5	239.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021996	Esd	ENSMUST00000177283	ENSMUSP00000135063	TRANSLATION	protein_coding	stop	-	5	247	7	6.83	0	219	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000176188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021996	Esd	ENSMUST00000177181	ENSMUSP00000135035	TRANSLATION	protein_coding	-	-	5	265	8	7.358	1	221.9	0	-4,-2	-	-	15.012	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000175712	ENSMUSP00000134932	TRANSLATION	protein_coding	stop	-	3	135	2	3.5	0	96.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000176726	ENSMUSP00000135708	TRANSLATION	protein_coding	start	-	5	105	4	2.83	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000175887	ENSMUSP00000135244	TRANSLATION	protein_coding	-	-	5	249	8	6.99	0	186.5	0	-4,-2	-	-	12.156	MINOR
ENSMUSG00000021996	Esd	ENSMUST00000176484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040721	Zfhx2	ENSMUST00000188534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040721	Zfhx2	ENSMUST00000036328	ENSMUSP00000045156	TRANSLATION	protein_coding	-	CCDS27107.1	1	2562	27	0	0.5	218.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000040721	Zfhx2	ENSMUST00000185430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040721	Zfhx2	ENSMUST00000176665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060084	Olfr748	ENSMUST00000073561	ENSMUSP00000073251	TRANSLATION	protein_coding	-	CCDS27023.1	-	307	0	0.42	0.5	175.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000060084	Olfr748	ENSMUST00000213101	ENSMUSP00000149491	TRANSLATION	protein_coding	-	CCDS27023.1	5	307	0	0.42	0.5	175.2	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000093985	Gm10406	ENSMUST00000100895	ENSMUSP00000098455	TRANSLATION	protein_coding	-	CCDS49396.1	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093985	Gm10406	ENSMUST00000170738	ENSMUSP00000130661	TRANSLATION	protein_coding	-	CCDS49396.1	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091569	Gm8232	ENSMUST00000164277	ENSMUSP00000130920	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000059256	Gzmd	ENSMUST00000082093	ENSMUSP00000080742	TRANSLATION	protein_coding	-	CCDS49502.1	1	252	7	4.12	0.5	190.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000105533	Trav7d-2	ENSMUST00000200127	ENSMUSP00000143514	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	65	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000063506	Arhgap22	ENSMUST00000140166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063506	Arhgap22	ENSMUST00000137590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063506	Arhgap22	ENSMUST00000111955	ENSMUSP00000107586	TRANSLATION	protein_coding	-	-	1	537	1	2.515	0	69.1	0	-4,-7	-	-	0.666	MINOR
ENSMUSG00000063506	Arhgap22	ENSMUST00000131086	ENSMUSP00000154002	TRANSLATION	protein_coding	stop	-	2	132	9	2.27	0	63.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063506	Arhgap22	ENSMUST00000165792	ENSMUSP00000153801	TRANSLATION	protein_coding	stop	-	2	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063506	Arhgap22	ENSMUST00000111956	ENSMUSP00000107587	TRANSLATION	protein_coding	-	CCDS26926.2	1	702	9	6.115	0.5	241.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000063506	Arhgap22	ENSMUST00000140711	ENSMUSP00000154670	TRANSLATION	protein_coding	stop	-	3	147	0	1.8	0	89.5	0	-2,2	-	-	-1	MINOR
ENSMUSG00000063506	Arhgap22	ENSMUST00000132659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094562	Trav13-4-dv7	ENSMUST00000180380	ENSMUSP00000137919	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	52.6	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094562	Trav13-4-dv7	ENSMUST00000184905	ENSMUSP00000138894	TRANSLATION	TR_V_gene	start/stop	-	-	88	0	1	0	52.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000059069	Olfr749	ENSMUST00000214290	ENSMUSP00000150627	TRANSLATION	protein_coding	-	CCDS49476.1	5	313	0	0.36	3.9	176.8	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000059069	Olfr749	ENSMUST00000074674	ENSMUSP00000074242	TRANSLATION	protein_coding	-	CCDS49476.1	3	313	0	0.36	3.9	176.8	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000095736	Trav7n-4	ENSMUST00000103609	ENSMUSP00000100386	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	1	69.8	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000050766	Ear14	ENSMUST00000049559	ENSMUSP00000056293	TRANSLATION	protein_coding	start	-	-	155	5	1	1.5	108.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000050766	Ear14	ENSMUST00000228064	ENSMUSP00000153887	TRANSLATION	protein_coding	-	-	-	153	5	1	0.5	108.9	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000072595	4930503E14Rik	ENSMUST00000226475	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072595	4930503E14Rik	ENSMUST00000100688	ENSMUSP00000098254	TRANSLATION	protein_coding	-	CCDS36890.1	1	177	0	0	0.5	84.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000072595	4930503E14Rik	ENSMUST00000226164	ENSMUSP00000154312	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	40.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037712	Fermt2	ENSMUST00000228769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037712	Fermt2	ENSMUST00000149723	ENSMUSP00000153760	TRANSLATION	protein_coding	stop	-	2	72	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037712	Fermt2	ENSMUST00000228208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037712	Fermt2	ENSMUST00000150660	ENSMUSP00000120918	TRANSLATION	protein_coding	stop	-	5	258	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037712	Fermt2	ENSMUST00000045905	ENSMUSP00000044554	TRANSLATION	protein_coding	-	CCDS26977.1	1	680	0	10.46	12.1	196.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037712	Fermt2	ENSMUST00000141424	ENSMUSP00000118214	TRANSLATION	protein_coding	stop	-	3	180	0	1.6	0	75.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060523	Olfr726	ENSMUST00000072370	ENSMUSP00000072207	TRANSLATION	protein_coding	-	CCDS27002.1	-	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000217422	ENSMUSP00000149373	TRANSLATION	protein_coding	-	CCDS27002.1	5	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000213345	ENSMUSP00000148885	TRANSLATION	protein_coding	-	CCDS27002.1	2	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000206834	ENSMUSP00000145832	TRANSLATION	protein_coding	-	CCDS27002.1	3	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000217319	ENSMUSP00000150594	TRANSLATION	protein_coding	-	CCDS27002.1	5	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000215105	ENSMUSP00000150599	TRANSLATION	protein_coding	-	CCDS27002.1	5	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000217025	ENSMUSP00000150116	TRANSLATION	protein_coding	-	CCDS27002.1	5	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000060523	Olfr726	ENSMUST00000215278	ENSMUSP00000150634	TRANSLATION	protein_coding	-	CCDS27002.1	3	321	0	0.36	5.1	159.1	6	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025277	Abhd6	ENSMUST00000225234	ENSMUSP00000153068	TRANSLATION	protein_coding	-	-	-	289	7	4.36	4.1	65.5	0	-4,-6	-	-	18.656	MINOR
ENSMUSG00000025277	Abhd6	ENSMUST00000166497	ENSMUSP00000129169	TRANSLATION	protein_coding	-	CCDS26808.1	1	336	7	4.558	12.8	65.5	1	-3,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025277	Abhd6	ENSMUST00000026313	ENSMUSP00000026313	TRANSLATION	protein_coding	-	CCDS26808.1	1	336	7	4.558	12.8	65.5	1	-3,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022109	Med4	ENSMUST00000226256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022109	Med4	ENSMUST00000022705	ENSMUSP00000022705	TRANSLATION	protein_coding	-	CCDS49538.1	1	270	0	0	1.5	107.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022109	Med4	ENSMUST00000228141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094543	Gm8212	ENSMUST00000166350	ENSMUSP00000130823	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90.2	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000090827	Gm8297	ENSMUST00000178389	ENSMUSP00000136942	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090827	Gm8297	ENSMUST00000171636	ENSMUSP00000131394	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090827	Gm8297	ENSMUST00000171964	ENSMUSP00000127256	TRANSLATION	protein_coding	-	-	5	267	0	0	0	73.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000021953	Tdh	ENSMUST00000165776	ENSMUSP00000129206	TRANSLATION	nonsense_mediated_decay	start	-	5	191	19	3.05	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021953	Tdh	ENSMUST00000168488	ENSMUSP00000131068	TRANSLATION	nonsense_mediated_decay	start	-	5	169	17	3.05	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000021953	Tdh	ENSMUST00000167685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021953	Tdh	ENSMUST00000022522	ENSMUSP00000022522	TRANSLATION	protein_coding	-	CCDS27202.1	1	373	31	7.88	2.7	71.3	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021953	Tdh	ENSMUST00000170772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021953	Tdh	ENSMUST00000168669	ENSMUSP00000132119	TRANSLATION	nonsense_mediated_decay	start	-	5	219	25	4.05	0	47.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000093953	Trav3d-3	ENSMUST00000196023	ENSMUSP00000143158	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	56.9	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000093953	Trav3d-3	ENSMUST00000103599	ENSMUSP00000100376	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	56.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000091792	Gm3573	ENSMUST00000168673	ENSMUSP00000127488	TRANSLATION	protein_coding	-	-	5	184	0	0	0.5	67.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022119	Rbm26	ENSMUST00000163499	ENSMUSP00000128197	TRANSLATION	protein_coding	-	-	1	1001	4	0	0	37.7	0	-4,-5	-	-	10	MINOR
ENSMUSG00000022119	Rbm26	ENSMUST00000100327	ENSMUSP00000097901	TRANSLATION	protein_coding	-	CCDS37003.1	1	983	4	0	8.8	37.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000022119	Rbm26	ENSMUST00000163545	ENSMUSP00000126414	TRANSLATION	protein_coding	-	-	5	1009	4	0	7.3	37.7	0	-4,-5	-	-	12.424	ALTERNATIVE:1
ENSMUSG00000022119	Rbm26	ENSMUST00000172122	ENSMUSP00000126804	TRANSLATION	protein_coding	start	-	2	210	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022119	Rbm26	ENSMUST00000022715	ENSMUSP00000022715	TRANSLATION	protein_coding	-	-	5	1007	4	0	8.3	37.7	0	-4,-5	-	-	12.808	ALTERNATIVE:1
ENSMUSG00000022026	Olfm4	ENSMUST00000088735	ENSMUSP00000086112	TRANSLATION	protein_coding	-	CCDS36989.1	2	538	0	1.505	0.5	248.4	0	2,-3	-	-	10.806	MINOR
ENSMUSG00000022026	Olfm4	ENSMUST00000228749	ENSMUSP00000154285	TRANSLATION	protein_coding	-	-	-	505	0	1.88	0	248.4	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022026	Olfm4	ENSMUST00000226541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095495	Trav9d-3	ENSMUST00000178252	ENSMUSP00000136492	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	52.8	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000090539	Gm9602	ENSMUST00000163325	ENSMUSP00000126151	TRANSLATION	protein_coding	-	-	1	205	0	0	0.5	85.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090539	Gm9602	ENSMUST00000177973	ENSMUSP00000137206	TRANSLATION	protein_coding	start/stop	-	5	205	0	0	0.5	85.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039197	Adk	ENSMUST00000225742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039197	Adk	ENSMUST00000045376	ENSMUSP00000047665	TRANSLATION	protein_coding	-	CCDS26862.1	1	361	31	10.05	17.5	265.2	0	-4,-5	-	-	22	PRINCIPAL:2
ENSMUSG00000039197	Adk	ENSMUST00000223645	ENSMUSP00000153265	TRANSLATION	protein_coding	start	-	-	41	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039197	Adk	ENSMUST00000223641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039197	Adk	ENSMUST00000223861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039197	Adk	ENSMUST00000224974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039197	Adk	ENSMUST00000224069	ENSMUSP00000153089	TRANSLATION	protein_coding	-	-	-	345	31	9.75	16.5	265.2	0	-4,-5	-	-	21.156	ALTERNATIVE:1
ENSMUSG00000039197	Adk	ENSMUST00000223915	ENSMUSP00000152928	TRANSLATION	protein_coding	start/stop	-	-	205	14	5.63	0	94.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039197	Adk	ENSMUST00000223558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039197	Adk	ENSMUST00000224899	ENSMUSP00000153057	TRANSLATION	protein_coding	stop	-	-	123	9	3	0	56.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090627	Gm8356	ENSMUST00000178896	ENSMUSP00000137204	TRANSLATION	protein_coding	stop	-	5	205	0	0	0.5	86	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090627	Gm8356	ENSMUST00000164917	ENSMUSP00000133130	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	86	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090627	Gm8356	ENSMUST00000163636	ENSMUSP00000127661	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	86	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000106620	Trav7-5	ENSMUST00000200609	ENSMUSP00000143345	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	66.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000037536	Fbxo34	ENSMUST00000226395	ENSMUSP00000154340	TRANSLATION	protein_coding	stop	-	-	88	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000228019	ENSMUSP00000153736	TRANSLATION	nonsense_mediated_decay	start	-	-	45	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000227162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037536	Fbxo34	ENSMUST00000043112	ENSMUSP00000044675	TRANSLATION	protein_coding	-	CCDS26988.1	1	746	4	0	0.5	19.8	0	-2,2	-	-	10	PRINCIPAL:3
ENSMUSG00000037536	Fbxo34	ENSMUST00000226954	ENSMUSP00000154472	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000228740	ENSMUSP00000154437	TRANSLATION	protein_coding	stop	-	-	28	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000228634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037536	Fbxo34	ENSMUST00000168833	ENSMUSP00000132271	TRANSLATION	protein_coding	-	CCDS49471.1	1	695	4	0	0.5	19.8	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000037536	Fbxo34	ENSMUST00000095941	ENSMUSP00000093634	TRANSLATION	protein_coding	-	CCDS49471.1	1	695	4	0	0.5	19.8	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000037536	Fbxo34	ENSMUST00000163324	ENSMUSP00000131708	TRANSLATION	protein_coding	-	CCDS49471.1	2	695	4	0	0.5	19.8	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000037536	Fbxo34	ENSMUST00000226432	ENSMUSP00000154565	TRANSLATION	protein_coding	stop	-	-	93	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000228668	ENSMUSP00000154110	TRANSLATION	protein_coding	stop	-	-	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037536	Fbxo34	ENSMUST00000165714	ENSMUSP00000130036	TRANSLATION	protein_coding	-	CCDS49471.1	1	695	4	0	0.5	19.8	0	-4,-7	-	-	10	ALTERNATIVE:2
ENSMUSG00000037536	Fbxo34	ENSMUST00000227601	ENSMUSP00000154798	TRANSLATION	nonsense_mediated_decay	start	-	-	44	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000042888	Prr30	ENSMUST00000057718	ENSMUSP00000060206	TRANSLATION	protein_coding	-	CCDS36999.1	3	401	0	0	1.5	605.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042888	Prr30	ENSMUST00000187304	ENSMUSP00000139590	TRANSLATION	protein_coding	-	CCDS36999.1	5	401	0	0	1.5	605.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094212	Trav14-3	ENSMUST00000103589	ENSMUSP00000100366	TRANSLATION	TR_V_gene	stop	-	-	120	0	1	0	68.3	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022019	Tdrd3	ENSMUST00000227304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022019	Tdrd3	ENSMUST00000168275	ENSMUSP00000129019	TRANSLATION	protein_coding	-	CCDS27305.2	1	743	5	3.58	5.3	140.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022019	Tdrd3	ENSMUST00000170865	ENSMUSP00000126189	TRANSLATION	protein_coding	-	-	1	737	5	3.58	0	140.4	0	-4,-5	-	-	17	MINOR
ENSMUSG00000022019	Tdrd3	ENSMUST00000170712	ENSMUSP00000126212	TRANSLATION	protein_coding	start/stop	-	3	212	0	1.58	0	76.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022019	Tdrd3	ENSMUST00000163714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022019	Tdrd3	ENSMUST00000169504	ENSMUSP00000131542	TRANSLATION	protein_coding	-	CCDS56972.1	1	716	5	3.58	0.5	138.6	0	-4,-5	-	-	16.892	MINOR
ENSMUSG00000093813	Trav9n-2	ENSMUST00000180097	ENSMUSP00000137598	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	59.7	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093813	Trav9n-2	ENSMUST00000198913	ENSMUSP00000142448	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	59.7	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000021957	Tkt	ENSMUST00000022529	ENSMUSP00000022529	TRANSLATION	protein_coding	-	CCDS26894.1	1	623	26	15.58	6.3	283.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021957	Tkt	ENSMUST00000223717	ENSMUSP00000153691	TRANSLATION	protein_coding	start	-	-	502	20	12.08	0	251.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021957	Tkt	ENSMUST00000223633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021957	Tkt	ENSMUST00000225039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021957	Tkt	ENSMUST00000225857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021957	Tkt	ENSMUST00000160406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021957	Tkt	ENSMUST00000162356	ENSMUSP00000124485	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021957	Tkt	ENSMUST00000160189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021957	Tkt	ENSMUST00000160274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091477	Gm5799	ENSMUST00000169023	ENSMUSP00000129052	TRANSLATION	protein_coding	-	-	5	201	0	0	0.5	82.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000000776	Polr3d	ENSMUST00000227748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000776	Polr3d	ENSMUST00000227985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000776	Polr3d	ENSMUST00000180358	ENSMUSP00000137614	TRANSLATION	protein_coding	-	CCDS27253.1	1	398	0	1.32	7.5	102.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000776	Polr3d	ENSMUST00000226549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000776	Polr3d	ENSMUST00000000793	ENSMUSP00000000793	TRANSLATION	protein_coding	-	CCDS27253.1	1	398	0	1.32	7.5	102.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000000776	Polr3d	ENSMUST00000226523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076874	Traj59	ENSMUST00000197589	ENSMUSP00000142997	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076874	Traj59	ENSMUST00000103686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000105953	Trav15d-2-dv6d-2	ENSMUST00000199800	ENSMUSP00000143660	TRANSLATION	TR_V_gene	stop	-	-	117	0	1	0	61.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000096746	Trav7d-3	ENSMUST00000179789	ENSMUSP00000136195	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	71.9	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000090872	Gm3239	ENSMUST00000169675	ENSMUSP00000133081	TRANSLATION	protein_coding	-	-	5	172	0	0	0.5	69.1	0	-4,-5	-	-	5.514	ALTERNATIVE:2
ENSMUSG00000090872	Gm3239	ENSMUST00000163525	ENSMUSP00000132382	TRANSLATION	protein_coding	-	-	5	227	0	0	0.5	75.2	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000098463	Cphx2	ENSMUST00000184089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098463	Cphx2	ENSMUST00000168149	ENSMUSP00000130311	TRANSLATION	protein_coding	-	CCDS56941.1	1	182	0	1.2	0.5	49.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000098463	Cphx2	ENSMUST00000183356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039308	Ndst2	ENSMUST00000047490	ENSMUSP00000040227	TRANSLATION	protein_coding	-	CCDS26854.1	1	883	18	8.45	8.8	955.9	0	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039308	Ndst2	ENSMUST00000224829	ENSMUSP00000153393	TRANSLATION	protein_coding	start	-	-	198	4	2.75	0	90.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039308	Ndst2	ENSMUST00000225320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039308	Ndst2	ENSMUST00000224234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039308	Ndst2	ENSMUST00000225000	ENSMUSP00000153141	TRANSLATION	protein_coding	-	CCDS26854.1	-	883	18	8.45	8.8	955.9	0	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039308	Ndst2	ENSMUST00000223679	ENSMUSP00000153036	TRANSLATION	protein_coding	-	CCDS26854.1	-	883	18	8.45	8.8	955.9	0	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039308	Ndst2	ENSMUST00000225419	ENSMUSP00000153275	TRANSLATION	nonsense_mediated_decay	-	-	-	513	0	0	0	730.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000040040	Ift88	ENSMUST00000150296	ENSMUSP00000120286	TRANSLATION	nonsense_mediated_decay	-	-	5	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040040	Ift88	ENSMUST00000171682	ENSMUSP00000130475	TRANSLATION	nonsense_mediated_decay	start	-	5	175	0	1.572	0	36.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040040	Ift88	ENSMUST00000139943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040040	Ift88	ENSMUST00000122063	ENSMUSP00000113768	TRANSLATION	protein_coding	-	CCDS36937.2	1	825	0	5.865	9.8	100.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040040	Ift88	ENSMUST00000154492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051615	Rap2a	ENSMUST00000062117	ENSMUSP00000056433	TRANSLATION	protein_coding	-	CCDS27341.1	1	183	24	2	21.5	192.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000021904	Sema3g	ENSMUST00000090180	ENSMUSP00000087643	TRANSLATION	protein_coding	-	CCDS26908.1	1	780	0	11.49	0.5	476.6	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021919	Chat	ENSMUST00000228420	ENSMUSP00000153964	TRANSLATION	protein_coding	stop	-	-	36	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021919	Chat	ENSMUST00000227579	ENSMUSP00000153738	TRANSLATION	protein_coding	stop	-	-	219	2	5.1	0	196.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021919	Chat	ENSMUST00000228256	ENSMUSP00000154480	TRANSLATION	protein_coding	stop	-	-	36	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021919	Chat	ENSMUST00000226351	ENSMUSP00000153857	TRANSLATION	protein_coding	stop	-	-	36	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021919	Chat	ENSMUST00000228511	ENSMUSP00000153837	TRANSLATION	protein_coding	stop	-	-	36	0	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021919	Chat	ENSMUST00000070125	ENSMUSP00000070865	TRANSLATION	protein_coding	-	CCDS26920.1	1	645	10	13.85	1.5	652.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021919	Chat	ENSMUST00000227675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021919	Chat	ENSMUST00000226365	ENSMUSP00000153721	TRANSLATION	protein_coding	stop	-	-	219	2	5.1	0	196.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036461	Elf1	ENSMUST00000227192	ENSMUSP00000153956	TRANSLATION	protein_coding	-	-	-	575	0	1.2	1.5	225.2	0	-4,-5	-	-	9.444	MINOR
ENSMUSG00000036461	Elf1	ENSMUST00000227104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036461	Elf1	ENSMUST00000110835	ENSMUSP00000106459	TRANSLATION	protein_coding	-	CCDS27301.1	1	612	0	1.2	0.5	267.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036461	Elf1	ENSMUST00000040131	ENSMUSP00000046515	TRANSLATION	protein_coding	-	CCDS27301.1	1	612	0	1.2	0.5	267.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000030662	Ipo5	ENSMUST00000228277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000030662	Ipo5	ENSMUST00000227270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000030662	Ipo5	ENSMUST00000032898	ENSMUSP00000032898	TRANSLATION	protein_coding	-	CCDS37014.1	1	1097	0	14.75	7.9	56.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039543	Cfap70	ENSMUST00000148692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039543	Cfap70	ENSMUST00000022348	ENSMUSP00000022348	TRANSLATION	protein_coding	-	CCDS49412.1	1	1097	0	2.12	0.5	38.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039543	Cfap70	ENSMUST00000022349	ENSMUSP00000022349	TRANSLATION	protein_coding	-	CCDS49411.1	1	1124	0	2.12	0.5	38.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039543	Cfap70	ENSMUST00000056073	ENSMUSP00000056869	TRANSLATION	protein_coding	-	CCDS49413.1	1	1141	0	2.12	1.5	38.9	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000039543	Cfap70	ENSMUST00000141432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039543	Cfap70	ENSMUST00000143940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022194	Pabpn1	ENSMUST00000022808	ENSMUSP00000022808	TRANSLATION	protein_coding	-	CCDS27104.1	1	302	0	4.18	1.5	56.1	0	-1,2	-	-	12	PRINCIPAL:2
ENSMUSG00000022194	Pabpn1	ENSMUST00000146271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022194	Pabpn1	ENSMUST00000150975	ENSMUSP00000133937	TRANSLATION	protein_coding	-	-	1	319	0	4.18	0	56.1	0	-1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022194	Pabpn1	ENSMUST00000116476	ENSMUSP00000112177	TRANSLATION	protein_coding	-	-	1	292	0	4.18	0	56.1	0	-1,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022194	Pabpn1	ENSMUST00000172695	ENSMUSP00000133579	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000022194	Pabpn1	ENSMUST00000140691	ENSMUSP00000115294	TRANSLATION	protein_coding	stop	-	2	164	0	4.18	0	56.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022194	Pabpn1	ENSMUST00000141446	ENSMUSP00000123305	TRANSLATION	protein_coding	-	-	3	168	0	3.85	0	56.1	0	-4,-5	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000022194	Pabpn1	ENSMUST00000139985	ENSMUSP00000122432	TRANSLATION	protein_coding	-	-	2	168	0	3.85	0	56.1	0	-4,-5	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000022194	Pabpn1	ENSMUST00000172557	ENSMUSP00000133405	TRANSLATION	protein_coding	-	-	3	178	0	3.85	2.9	56.1	0	-4,-5	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000094634	Gm3468	ENSMUST00000165193	ENSMUSP00000130760	TRANSLATION	protein_coding	-	-	5	216	0	0	0	75.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058690	Ccser2	ENSMUST00000183038	ENSMUSP00000138718	TRANSLATION	protein_coding	-	CCDS26947.1	1	485	0	0	1.5	0	0	-4,-5	-	-	0.232	MINOR
ENSMUSG00000058690	Ccser2	ENSMUST00000182635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058690	Ccser2	ENSMUST00000182576	ENSMUSP00000138318	TRANSLATION	protein_coding	start	-	5	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058690	Ccser2	ENSMUST00000090024	ENSMUSP00000087478	TRANSLATION	protein_coding	-	CCDS26948.1	1	833	0	0	3.9	0	0	-4,-5	-	-	1.348	PRINCIPAL:3
ENSMUSG00000058690	Ccser2	ENSMUST00000182042	ENSMUSP00000138453	TRANSLATION	protein_coding	-	CCDS84112.1	5	261	0	0	5.3	0	0	-4,-7	-	-	2	ALTERNATIVE:1
ENSMUSG00000058690	Ccser2	ENSMUST00000182797	ENSMUSP00000138787	TRANSLATION	protein_coding	-	-	5	277	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000058690	Ccser2	ENSMUST00000183316	ENSMUSP00000138100	TRANSLATION	protein_coding	start	-	5	204	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058690	Ccser2	ENSMUST00000182558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058690	Ccser2	ENSMUST00000183007	ENSMUSP00000153624	TRANSLATION	protein_coding	-	-	5	375	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000058690	Ccser2	ENSMUST00000067700	ENSMUSP00000068550	TRANSLATION	protein_coding	-	CCDS84113.1	5	1038	0	0	1.5	0	0	-4,-5	-	-	0.232	MINOR
ENSMUSG00000048153	Olfr49	ENSMUST00000059996	ENSMUSP00000054361	TRANSLATION	protein_coding	-	CCDS27085.1	-	313	0	0.42	1.5	169.6	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048153	Olfr49	ENSMUST00000216214	ENSMUSP00000149840	TRANSLATION	protein_coding	-	CCDS27085.1	5	313	0	0.42	1.5	169.6	4	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022070	Bora	ENSMUST00000226823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022070	Bora	ENSMUST00000227744	ENSMUSP00000154660	TRANSLATION	nonsense_mediated_decay	-	-	-	273	0	0	0	224.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022070	Bora	ENSMUST00000022656	ENSMUSP00000022656	TRANSLATION	protein_coding	-	CCDS27309.1	1	525	0	0	0.5	224.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022070	Bora	ENSMUST00000227128	ENSMUSP00000154817	TRANSLATION	nonsense_mediated_decay	-	-	-	115	0	0	0	94.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022070	Bora	ENSMUST00000228082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007591	Tssk4	ENSMUST00000227297	ENSMUSP00000154232	TRANSLATION	nonsense_mediated_decay	-	-	-	166	16	1.4	0	104.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007591	Tssk4	ENSMUST00000226591	ENSMUSP00000153752	TRANSLATION	protein_coding	-	-	-	328	21	2.84	5.1	216.1	0	-4,-5	-	-	19.334	ALTERNATIVE:1
ENSMUSG00000007591	Tssk4	ENSMUST00000164809	ENSMUSP00000127728	TRANSLATION	protein_coding	-	-	1	288	22	2.066	0	182.3	0	-4,-5	-	-	14.334	MINOR
ENSMUSG00000007591	Tssk4	ENSMUST00000226497	ENSMUSP00000154288	TRANSLATION	protein_coding	-	-	-	328	22	2.15	2.4	188.2	0	-4,-5	-	-	15.55	MINOR
ENSMUSG00000007591	Tssk4	ENSMUST00000007735	ENSMUSP00000007735	TRANSLATION	protein_coding	-	CCDS56959.1	1	292	22	2	1.5	181.2	0	-4,-5	-	-	14.374	MINOR
ENSMUSG00000007591	Tssk4	ENSMUST00000228395	ENSMUSP00000154783	TRANSLATION	protein_coding	-	-	-	338	22	2.84	3.9	199.2	0	-4,-5	-	-	18.4	PRINCIPAL:5
ENSMUSG00000007591	Tssk4	ENSMUST00000228041	ENSMUSP00000154143	TRANSLATION	protein_coding	-	-	-	322	21	2.15	2.4	200.6	0	-4,-5	-	-	15.628	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000176489	ENSMUSP00000134824	TRANSLATION	protein_coding	stop	-	5	364	0	3.23	0	240.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000176832	ENSMUSP00000135211	TRANSLATION	protein_coding	-	-	5	408	0	4.23	0	254.8	0	-4,-7	-	-	12	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000022544	ENSMUSP00000022544	TRANSLATION	protein_coding	-	CCDS84149.1	1	404	0	4.23	1.5	254.8	0	-4,-7	-	-	12.153	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000176386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021972	Hmbox1	ENSMUST00000177326	ENSMUSP00000135372	TRANSLATION	protein_coding	start	-	5	445	0	4.23	9.5	254.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000067843	ENSMUSP00000066905	TRANSLATION	protein_coding	-	CCDS36955.1	1	419	0	4.23	10.8	254.8	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000021972	Hmbox1	ENSMUST00000176657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021972	Hmbox1	ENSMUST00000175744	ENSMUSP00000135272	TRANSLATION	protein_coding	-	-	1	405	0	4.23	8.8	254.8	0	-4,-7	-	-	14.388	ALTERNATIVE:1
ENSMUSG00000021972	Hmbox1	ENSMUST00000175905	ENSMUSP00000135657	TRANSLATION	protein_coding	-	-	5	416	0	4.23	0	254.8	0	-4,-7	-	-	12	MINOR
ENSMUSG00000021972	Hmbox1	ENSMUST00000176128	ENSMUSP00000135448	TRANSLATION	protein_coding	-	CCDS84150.1	5	420	0	4.23	10.8	254.8	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000021967	Mrpl57	ENSMUST00000224313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021967	Mrpl57	ENSMUST00000022538	ENSMUSP00000022538	TRANSLATION	protein_coding	-	CCDS27161.1	1	102	0	1	12.8	130	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000076796	Trav16d-dv11	ENSMUST00000103606	ENSMUSP00000100383	TRANSLATION	TR_V_gene	stop	-	-	117	0	1	0	59.1	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076878	Traj53	ENSMUST00000103690	ENSMUSP00000143627	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000041730	Prrxl1	ENSMUST00000189022	ENSMUSP00000140337	TRANSLATION	protein_coding	-	CCDS84110.1	1	263	0	2.4	10.8	117.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041730	Prrxl1	ENSMUST00000068938	ENSMUSP00000064107	TRANSLATION	protein_coding	-	CCDS26922.1	1	220	0	2.4	0.5	87.3	0	-4,-5	-	-	10.164	MINOR
ENSMUSG00000041730	Prrxl1	ENSMUST00000228878	ENSMUSP00000154801	TRANSLATION	protein_coding	-	-	-	180	0	2.4	0	87.3	0	-4,-5	-	-	10.164	MINOR
ENSMUSG00000041730	Prrxl1	ENSMUST00000187377	ENSMUSP00000140687	TRANSLATION	protein_coding	-	CCDS26922.1	1	220	0	2.4	0.5	87.3	0	-4,-5	-	-	10.164	MINOR
ENSMUSG00000041730	Prrxl1	ENSMUST00000186452	ENSMUSP00000139756	TRANSLATION	protein_coding	-	CCDS84110.1	5	263	0	2.4	10.8	117.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095572	Trav4n-3	ENSMUST00000103618	ENSMUSP00000100395	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	46.7	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000044286	Olfr221	ENSMUST00000052560	ENSMUSP00000063109	TRANSLATION	protein_coding	-	CCDS27050.1	5	311	0	0.28	1.5	172	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044286	Olfr221	ENSMUST00000214342	ENSMUSP00000150231	TRANSLATION	protein_coding	-	CCDS27050.1	-	311	0	0.28	1.5	172	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044286	Olfr221	ENSMUST00000214071	ENSMUSP00000150675	TRANSLATION	protein_coding	-	CCDS27050.1	5	311	0	0.28	1.5	172	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044286	Olfr221	ENSMUST00000216907	ENSMUSP00000151163	TRANSLATION	protein_coding	-	CCDS27050.1	5	311	0	0.28	1.5	172	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044286	Olfr221	ENSMUST00000216188	ENSMUSP00000149854	TRANSLATION	protein_coding	-	CCDS27050.1	5	311	0	0.28	1.5	172	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021745	Ptprg	ENSMUST00000223890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021745	Ptprg	ENSMUST00000148113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021745	Ptprg	ENSMUST00000022264	ENSMUSP00000022264	TRANSLATION	protein_coding	-	CCDS26816.1	1	1442	13	22.46	0.5	793.9	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000021745	Ptprg	ENSMUST00000226099	ENSMUSP00000152991	TRANSLATION	nonsense_mediated_decay	start	-	-	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021745	Ptprg	ENSMUST00000155727	ENSMUSP00000121427	TRANSLATION	nonsense_mediated_decay	start	-	3	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021745	Ptprg	ENSMUST00000134290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021745	Ptprg	ENSMUST00000119888	ENSMUSP00000113679	TRANSLATION	protein_coding	-	CCDS84092.1	1	667	11	14.7	0.5	491.5	0	-4,-7	-	-	4.668	MINOR
ENSMUSG00000021745	Ptprg	ENSMUST00000142917	ENSMUSP00000121268	TRANSLATION	nonsense_mediated_decay	-	-	1	260	1	5.298	0	170.3	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000035566	Pcdh17	ENSMUST00000071370	ENSMUSP00000071325	TRANSLATION	protein_coding	-	CCDS27304.1	1	1157	44	0.6	6.3	325.2	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000035566	Pcdh17	ENSMUST00000226362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096197	4930555G01Rik	ENSMUST00000112770	ENSMUSP00000108390	TRANSLATION	protein_coding	-	CCDS49383.1	1	205	0	0	0.5	84.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000115726	Gm30083	ENSMUST00000227795	ENSMUSP00000153809	TRANSLATION	protein_coding	-	-	-	573	0	4.4	0.5	124.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000115726	Gm30083	ENSMUST00000227523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022033	Pbk	ENSMUST00000152130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022033	Pbk	ENSMUST00000139644	ENSMUSP00000114484	TRANSLATION	protein_coding	stop	-	3	120	1	2.85	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022033	Pbk	ENSMUST00000022612	ENSMUSP00000022612	TRANSLATION	protein_coding	-	CCDS27215.1	1	330	3	6.85	0.5	135.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000091022	Gm3115	ENSMUST00000166928	ENSMUSP00000127156	TRANSLATION	protein_coding	-	-	5	211	0	0	0	63.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000091022	Gm3115	ENSMUST00000177660	ENSMUSP00000136699	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	63.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090512	Gm3424	ENSMUST00000164585	ENSMUSP00000127795	TRANSLATION	protein_coding	-	-	5	263	0	0	0	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000090512	Gm3424	ENSMUST00000178418	ENSMUSP00000136154	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000050666	Vstm4	ENSMUST00000053175	ENSMUSP00000055178	TRANSLATION	protein_coding	-	CCDS26923.1	1	319	0	0	0.5	27.2	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000076758	Trav1	ENSMUST00000103567	ENSMUSP00000100344	TRANSLATION	TR_V_gene	stop	-	-	110	0	1.1	0	44.5	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076758	Trav1	ENSMUST00000185651	ENSMUSP00000140728	TRANSLATION	TR_V_gene	stop	-	-	109	0	1.1	0	44.5	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000090868	Trav9d-4	ENSMUST00000167409	ENSMUSP00000132136	TRANSLATION	TR_V_gene	stop	-	-	102	0	0.7	0	45.2	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000090868	Trav9d-4	ENSMUST00000200548	ENSMUSP00000143411	TRANSLATION	TR_V_gene	stop	-	-	103	0	0.7	0	45.2	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096372	Gm8138	ENSMUST00000169473	ENSMUSP00000128755	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90.2	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000021939	Ctsb	ENSMUST00000225540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021939	Ctsb	ENSMUST00000006235	ENSMUSP00000006235	TRANSLATION	protein_coding	-	CCDS27197.1	1	339	4	8.5	5.5	287.2	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021939	Ctsb	ENSMUST00000225639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096488	Gm10409	ENSMUST00000170123	ENSMUSP00000126947	TRANSLATION	protein_coding	-	-	1	150	0	0	0.5	68.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041707	Tmem273	ENSMUST00000228955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041707	Tmem273	ENSMUST00000039191	ENSMUSP00000132997	TRANSLATION	protein_coding	-	CCDS49438.1	1	95	0	0	2.7	123.1	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041707	Tmem273	ENSMUST00000227871	ENSMUSP00000153805	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	2.7	123.1	1	3,-2	-	-	-1	MINOR
ENSMUSG00000041707	Tmem273	ENSMUST00000227060	ENSMUSP00000154476	TRANSLATION	protein_coding	-	-	-	51	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000041707	Tmem273	ENSMUST00000228481	ENSMUSP00000154552	TRANSLATION	protein_coding	start	-	-	42	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022035	Ccdc25	ENSMUST00000226027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022035	Ccdc25	ENSMUST00000022614	ENSMUSP00000022614	TRANSLATION	protein_coding	-	CCDS27217.1	1	208	0	0	16.2	97.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022035	Ccdc25	ENSMUST00000225823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098773	Gm27179	ENSMUST00000184652	ENSMUSP00000139267	TRANSLATION	protein_coding	-	-	1	618	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000104620	Trav7-1	ENSMUST00000198019	ENSMUSP00000142920	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	71.8	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000045776	Lrtm1	ENSMUST00000224708	ENSMUSP00000153518	TRANSLATION	protein_coding	-	-	-	383	0	1.35	0	56.7	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045776	Lrtm1	ENSMUST00000224760	ENSMUSP00000153372	TRANSLATION	protein_coding	-	-	-	234	0	1.05	0	56.7	0	1,-3	-	-	10.668	MINOR
ENSMUSG00000045776	Lrtm1	ENSMUST00000055662	ENSMUSP00000061828	TRANSLATION	protein_coding	-	CCDS26889.1	1	356	0	1.35	0.5	56.7	1	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000022204	Ngdn	ENSMUST00000022815	ENSMUSP00000022815	TRANSLATION	protein_coding	-	CCDS36928.1	1	315	0	0	0.5	57.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022204	Ngdn	ENSMUST00000226658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022204	Ngdn	ENSMUST00000227833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022204	Ngdn	ENSMUST00000226258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049011	Olfr729	ENSMUST00000061020	ENSMUSP00000051755	TRANSLATION	protein_coding	-	CCDS27005.1	-	323	0	0.3	5.1	155.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049011	Olfr729	ENSMUST00000215451	ENSMUSP00000149189	TRANSLATION	protein_coding	-	CCDS27005.1	5	323	0	0.3	5.1	155.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049011	Olfr729	ENSMUST00000215327	ENSMUSP00000151127	TRANSLATION	protein_coding	-	CCDS27005.1	5	323	0	0.3	5.1	155.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000049011	Olfr729	ENSMUST00000213163	ENSMUSP00000148960	TRANSLATION	protein_coding	-	CCDS27005.1	5	323	0	0.3	5.1	155.1	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000076902	Traj27	ENSMUST00000103714	ENSMUSP00000143220	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021852	Slc35f4	ENSMUST00000146164	ENSMUSP00000154089	TRANSLATION	protein_coding	-	-	1	196	0	0	0	0	4	-4,-5	-	-	0	MINOR
ENSMUSG00000021852	Slc35f4	ENSMUST00000123534	ENSMUSP00000122405	TRANSLATION	protein_coding	-	-	1	313	0	0	0	0	9	-4,-5	-	-	0	MINOR
ENSMUSG00000021852	Slc35f4	ENSMUST00000138884	ENSMUSP00000119007	TRANSLATION	protein_coding	-	-	1	335	0	0	0	22.7	12	-4,-6	-	-	6	MINOR
ENSMUSG00000021852	Slc35f4	ENSMUST00000135254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021852	Slc35f4	ENSMUST00000227634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021852	Slc35f4	ENSMUST00000074368	ENSMUSP00000073972	TRANSLATION	protein_coding	-	CCDS26997.1	1	485	0	0	7.6	22.4	16	-4,-5	-	-	8.922	PRINCIPAL:1
ENSMUSG00000041650	Pcca	ENSMUST00000147018	ENSMUSP00000135557	TRANSLATION	nonsense_mediated_decay	start	-	1	35	0	0.3492	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000177312	ENSMUSP00000135665	TRANSLATION	nonsense_mediated_decay	start	-	5	183	15	5.58	0	229.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000143240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041650	Pcca	ENSMUST00000154206	ENSMUSP00000120027	TRANSLATION	protein_coding	stop	-	3	131	0	2.49	0	98.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000038374	ENSMUSP00000038763	TRANSLATION	protein_coding	-	CCDS27350.1	1	724	25	17.1392	1.5	625.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000041650	Pcca	ENSMUST00000128893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041650	Pcca	ENSMUST00000140517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041650	Pcca	ENSMUST00000132444	ENSMUSP00000135087	TRANSLATION	protein_coding	start	-	5	86	0	1.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000135578	ENSMUSP00000123422	TRANSLATION	protein_coding	stop	-	3	163	3	3.57	0	88.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000152383	ENSMUSP00000135266	TRANSLATION	nonsense_mediated_decay	start	-	1	166	0	2.64	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000041650	Pcca	ENSMUST00000156755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041650	Pcca	ENSMUST00000138836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041650	Pcca	ENSMUST00000148172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095854	Trav14d-1	ENSMUST00000187138	ENSMUSP00000141168	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	66.6	0	-3,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095854	Trav14d-1	ENSMUST00000181038	ENSMUSP00000137691	TRANSLATION	TR_V_gene	stop	-	-	121	0	1	0	66.6	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000021866	Anxa11	ENSMUST00000022416	ENSMUSP00000022416	TRANSLATION	protein_coding	-	CCDS26875.1	1	503	18	9.25	1.5	342.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021866	Anxa11	ENSMUST00000133547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021866	Anxa11	ENSMUST00000112364	ENSMUSP00000107983	TRANSLATION	protein_coding	-	-	1	447	14	6.49	0	201.5	0	-4,-5	-	-	3.816	MINOR
ENSMUSG00000021866	Anxa11	ENSMUST00000124704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076910	Traj19	ENSMUST00000103722	ENSMUSP00000142545	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076821	Trav8n-2	ENSMUST00000103632	ENSMUSP00000100409	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	60.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000072423	Psmb11	ENSMUST00000228446	ENSMUSP00000154313	TRANSLATION	protein_coding	stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072423	Psmb11	ENSMUST00000097177	ENSMUSP00000132140	TRANSLATION	protein_coding	-	CCDS49491.1	-	302	9	0.8	1.5	136	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021891	Mettl6	ENSMUST00000228943	ENSMUSP00000154487	TRANSLATION	protein_coding	stop	-	-	53	9	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021891	Mettl6	ENSMUST00000228181	ENSMUSP00000153931	TRANSLATION	protein_coding	stop	-	-	186	21	0	0	47.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021891	Mettl6	ENSMUST00000227777	ENSMUSP00000154767	TRANSLATION	protein_coding	-	-	-	255	21	0	0.5	57.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021891	Mettl6	ENSMUST00000227595	ENSMUSP00000154580	TRANSLATION	protein_coding	-	-	-	237	12	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021891	Mettl6	ENSMUST00000226986	ENSMUSP00000154173	TRANSLATION	protein_coding	start	-	-	78	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021891	Mettl6	ENSMUST00000055303	ENSMUSP00000077138	TRANSLATION	protein_coding	-	CCDS26913.1	1	282	21	0	0.5	57.8	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000021891	Mettl6	ENSMUST00000228727	ENSMUSP00000154679	TRANSLATION	protein_coding	-	-	-	232	21	0	0	57.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000021891	Mettl6	ENSMUST00000227852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021891	Mettl6	ENSMUST00000228309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021891	Mettl6	ENSMUST00000227095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021823	Vcl	ENSMUST00000226113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021823	Vcl	ENSMUST00000022369	ENSMUSP00000022369	TRANSLATION	protein_coding	-	CCDS26860.1	1	1066	0	20.75	18.3	992.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021823	Vcl	ENSMUST00000224380	ENSMUSP00000153447	TRANSLATION	protein_coding	start/stop	-	-	149	0	3	0	86.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034997	Htr2a	ENSMUST00000036653	ENSMUSP00000047774	TRANSLATION	protein_coding	-	CCDS27275.1	1	471	5	2.1	7.5	231.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000096600	Trav6d-3	ENSMUST00000181483	ENSMUSP00000137760	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.3	0	40	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096600	Trav6d-3	ENSMUST00000184883	ENSMUSP00000139137	TRANSLATION	TR_V_gene	start/stop	-	-	102	0	1.132	0	40	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000054509	Parp4	ENSMUST00000162312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054509	Parp4	ENSMUST00000161553	ENSMUSP00000124258	TRANSLATION	protein_coding	-	CCDS49503.1	5	1969	7	3.28	0	435.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022094	Slc39a14	ENSMUST00000142598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022094	Slc39a14	ENSMUST00000127000	ENSMUSP00000117792	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022094	Slc39a14	ENSMUST00000022688	ENSMUSP00000022688	TRANSLATION	protein_coding	-	CCDS49536.1	1	489	0	0	3.9	225.9	4	1,-2	-	-	6.712	ALTERNATIVE:2
ENSMUSG00000022094	Slc39a14	ENSMUST00000152202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022094	Slc39a14	ENSMUST00000152442	ENSMUSP00000117010	TRANSLATION	protein_coding	stop	-	5	164	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022094	Slc39a14	ENSMUST00000146453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022094	Slc39a14	ENSMUST00000145040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022094	Slc39a14	ENSMUST00000068044	ENSMUSP00000066108	TRANSLATION	protein_coding	-	CCDS36969.1	5	489	0	0	3.9	230.7	4	1,-2	-	-	7	PRINCIPAL:3
ENSMUSG00000022094	Slc39a14	ENSMUST00000152067	ENSMUSP00000119040	TRANSLATION	protein_coding	-	CCDS49536.1	1	489	0	0	3.9	225.9	4	1,-2	-	-	6.712	ALTERNATIVE:2
ENSMUSG00000022094	Slc39a14	ENSMUST00000155825	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022094	Slc39a14	ENSMUST00000143153	ENSMUSP00000122816	TRANSLATION	protein_coding	stop	-	5	48	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022094	Slc39a14	ENSMUST00000139284	ENSMUSP00000122615	TRANSLATION	protein_coding	stop	-	2	64	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022094	Slc39a14	ENSMUST00000151011	ENSMUSP00000118319	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000076873	Trdv5	ENSMUST00000103685	ENSMUSP00000100458	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	69.2	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076846	Trav13-2	ENSMUST00000103658	ENSMUSP00000100435	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	56.2	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022085	Pebp4	ENSMUST00000022678	ENSMUSP00000022678	TRANSLATION	protein_coding	-	CCDS27245.1	1	242	8	2.48	0.5	0	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022097	Sftpc	ENSMUST00000227152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022097	Sftpc	ENSMUST00000022692	ENSMUSP00000022692	TRANSLATION	protein_coding	-	CCDS27254.1	1	193	0	2.8	2.7	241.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096869	Gm6676	ENSMUST00000178376	ENSMUSP00000137293	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	84.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096869	Gm6676	ENSMUST00000166493	ENSMUSP00000130300	TRANSLATION	protein_coding	-	-	1	205	0	0	0.5	84.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000057903	Olfr739	ENSMUST00000216949	ENSMUSP00000150559	TRANSLATION	protein_coding	-	CCDS27015.1	5	309	0	0.42	1.5	179	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057903	Olfr739	ENSMUST00000075261	ENSMUSP00000074740	TRANSLATION	protein_coding	-	CCDS27015.1	-	309	0	0.42	1.5	179	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095030	Olfr1513	ENSMUST00000215147	ENSMUSP00000149216	TRANSLATION	protein_coding	-	CCDS27055.1	5	313	0	0.3	1.5	165.6	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095030	Olfr1513	ENSMUST00000089739	ENSMUSP00000087171	TRANSLATION	protein_coding	-	CCDS27055.1	-	313	0	0.3	1.5	165.6	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000060548	Tnfrsf19	ENSMUST00000111236	ENSMUSP00000106867	TRANSLATION	protein_coding	-	CCDS36941.1	1	416	0	0	1.5	46.8	2	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000060548	Tnfrsf19	ENSMUST00000111234	ENSMUSP00000106865	TRANSLATION	protein_coding	-	CCDS36941.1	1	416	0	0	1.5	46.8	2	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000060548	Tnfrsf19	ENSMUST00000225730	ENSMUSP00000152920	TRANSLATION	protein_coding	-	-	-	214	0	0	0	46.8	2	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000060548	Tnfrsf19	ENSMUST00000225501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060548	Tnfrsf19	ENSMUST00000224371	ENSMUSP00000153577	TRANSLATION	protein_coding	-	-	-	214	0	0	0	46.8	2	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000115338	Pnp	ENSMUST00000048615	ENSMUSP00000043926	TRANSLATION	protein_coding	-	CCDS27029.1	1	289	12	5.5	6.3	180.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000115338	Pnp	ENSMUST00000228631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115338	Pnp	ENSMUST00000228712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115338	Pnp	ENSMUST00000178092	ENSMUSP00000136557	TRANSLATION	protein_coding	-	CCDS27029.1	5	289	12	5.5	6.3	180.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000115338	Pnp	ENSMUST00000226871	ENSMUSP00000154805	TRANSLATION	protein_coding	stop	-	-	136	8	3	0	67.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021930	Spryd7	ENSMUST00000100496	ENSMUSP00000098065	TRANSLATION	protein_coding	-	CCDS79330.1	1	163	0	0	1.5	26.5	0	-4,-6	-	-	2.718	MINOR
ENSMUSG00000021930	Spryd7	ENSMUST00000022497	ENSMUSP00000022497	TRANSLATION	protein_coding	-	CCDS27185.1	1	196	0	0	16.3	61.5	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000021943	Gdf10	ENSMUST00000168727	ENSMUSP00000128621	TRANSLATION	protein_coding	-	CCDS26927.1	1	476	0	1.2	1.5	98	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000095318	Gm8024	ENSMUST00000167099	ENSMUSP00000132417	TRANSLATION	protein_coding	-	-	5	100	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000025278	Flnb	ENSMUST00000052678	ENSMUSP00000052020	TRANSLATION	protein_coding	-	CCDS70540.1	5	2602	0	38.9	7.5	1342.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025278	Flnb	ENSMUST00000228206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000170343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000171735	ENSMUSP00000127132	TRANSLATION	protein_coding	-	-	1	153	0	3.5	0	70.3	0	-4,-5	-	-	4.212	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000167223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021910	Nisch	ENSMUST00000169628	ENSMUSP00000131465	TRANSLATION	protein_coding	start	-	3	333	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000169149	ENSMUSP00000131623	TRANSLATION	nonsense_mediated_decay	start	-	3	58	0	0.95	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000168206	ENSMUSP00000132842	TRANSLATION	protein_coding	-	-	1	1348	0	4.841	0	29.8	0	-4,-5	-	-	1.782	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000169906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000167449	ENSMUSP00000126001	TRANSLATION	protein_coding	start	-	2	166	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000163846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021910	Nisch	ENSMUST00000164000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000168451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000167602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000164989	ENSMUSP00000126982	TRANSLATION	nonsense_mediated_decay	-	-	1	334	0	6.291	0	70.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000172142	ENSMUSP00000132413	TRANSLATION	protein_coding	-	CCDS84107.1	1	516	0	9.701	5.1	100.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000021910	Nisch	ENSMUST00000022469	ENSMUSP00000022469	TRANSLATION	protein_coding	-	CCDS36853.1	2	1593	0	9.701	0.5	94.2	0	-4,-5	-	-	11.646	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000170253	ENSMUSP00000129547	TRANSLATION	protein_coding	start	-	2	149	0	2.51	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000163552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000172370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021910	Nisch	ENSMUST00000164956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021910	Nisch	ENSMUST00000164617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021910	Nisch	ENSMUST00000167979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021910	Nisch	ENSMUST00000170436	ENSMUSP00000131861	TRANSLATION	nonsense_mediated_decay	start	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021910	Nisch	ENSMUST00000165981	ENSMUSP00000130210	TRANSLATION	protein_coding	-	-	1	472	0	9.341	0	100.1	0	-4,-5	-	-	11.28	MINOR
ENSMUSG00000091740	Gm7929	ENSMUST00000178711	ENSMUSP00000136129	TRANSLATION	protein_coding	start/stop	-	5	208	0	0	0	87.1	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000091740	Gm7929	ENSMUST00000224730	ENSMUSP00000153580	TRANSLATION	protein_coding	start	-	-	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000075573	Defb47	ENSMUST00000100492	ENSMUSP00000098061	TRANSLATION	protein_coding	-	CCDS36945.1	1	79	0	0	1.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000022103	Gfra2	ENSMUST00000227697	ENSMUSP00000154391	TRANSLATION	protein_coding	-	-	-	331	0	4.25	4.2	137.3	0	3,-2	-	-	8.679	MINOR
ENSMUSG00000022103	Gfra2	ENSMUST00000227633	ENSMUSP00000153937	TRANSLATION	protein_coding	-	-	-	309	0	2.8	0	64.2	0	-4,-2	-	-	0	MINOR
ENSMUSG00000022103	Gfra2	ENSMUST00000022699	ENSMUSP00000022699	TRANSLATION	protein_coding	-	CCDS27263.1	1	464	0	5.8	7.8	164.5	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000092109	Gm9376	ENSMUST00000171107	ENSMUSP00000128952	TRANSLATION	protein_coding	-	CCDS49564.1	-	176	0	0.2	0.5	34.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096904	Lamtor3-ps	ENSMUST00000164408	ENSMUSP00000127811	TRANSLATION	protein_coding	-	-	5	186	0	0	0	75.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096904	Lamtor3-ps	ENSMUST00000179312	ENSMUSP00000136844	TRANSLATION	protein_coding	-	-	1	131	0	0	0	70	0	-4,-5	-	-	5.538	PRINCIPAL:3
ENSMUSG00000076896	Traj33	ENSMUST00000103708	ENSMUSP00000142562	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0.5	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091563	Gm8108	ENSMUST00000167397	ENSMUSP00000128977	TRANSLATION	protein_coding	-	-	5	172	0	0	0.5	68.8	0	-4,-5	-	-	5.502	ALTERNATIVE:2
ENSMUSG00000091563	Gm8108	ENSMUST00000170207	ENSMUSP00000132118	TRANSLATION	protein_coding	-	-	5	216	0	0	0	75	0	-4,-7	-	-	6	PRINCIPAL:5
ENSMUSG00000079383	Gm3298	ENSMUST00000165289	ENSMUSP00000126766	TRANSLATION	protein_coding	-	-	1	171	0	0	0	76.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079383	Gm3298	ENSMUST00000172110	ENSMUSP00000131718	TRANSLATION	protein_coding	stop	-	5	205	0	0	0.5	76.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093825	Olfr723	ENSMUST00000164157	ENSMUSP00000129254	TRANSLATION	protein_coding	-	CCDS26999.1	-	309	0	0.42	3.9	148.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000093825	Olfr723	ENSMUST00000206058	ENSMUSP00000145863	TRANSLATION	protein_coding	-	CCDS26999.1	3	309	0	0.42	3.9	148.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046049	Rp1l1	ENSMUST00000224314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046049	Rp1l1	ENSMUST00000058229	ENSMUSP00000055449	TRANSLATION	protein_coding	-	CCDS36951.1	1	1859	0	0.64	0.5	98.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000021947	Cryl1	ENSMUST00000022517	ENSMUSP00000022517	TRANSLATION	protein_coding	-	CCDS27155.1	1	319	24	7.5	6.3	229.4	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021947	Cryl1	ENSMUST00000225765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021947	Cryl1	ENSMUST00000224292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021947	Cryl1	ENSMUST00000223986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021794	Glud1	ENSMUST00000159784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021794	Glud1	ENSMUST00000163955	ENSMUSP00000130934	TRANSLATION	protein_coding	start/stop	-	5	144	22	3.32	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021794	Glud1	ENSMUST00000022322	ENSMUSP00000022322	TRANSLATION	protein_coding	-	CCDS26935.1	1	558	55	11.58	5.1	203.3	0	-2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000021794	Glud1	ENSMUST00000162912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021794	Glud1	ENSMUST00000161593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090713	Gm8127	ENSMUST00000163655	ENSMUSP00000127788	TRANSLATION	protein_coding	-	-	5	211	0	0	0	90.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000053754	Chd8	ENSMUST00000226681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000199135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000200169	ENSMUSP00000142890	TRANSLATION	protein_coding	-	CCDS36919.1	5	2582	3	12.294	0.5	422.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000053754	Chd8	ENSMUST00000226625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000227897	ENSMUSP00000154595	TRANSLATION	protein_coding	start/stop	-	-	138	0	0.9	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053754	Chd8	ENSMUST00000147827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000149975	ENSMUSP00000122995	TRANSLATION	protein_coding	start/stop	-	5	1031	0	2.364	0	58.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053754	Chd8	ENSMUST00000145404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000147309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000122823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000226307	ENSMUSP00000154509	TRANSLATION	protein_coding	stop	-	-	22	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053754	Chd8	ENSMUST00000134329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000149694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053754	Chd8	ENSMUST00000155614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000136528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053754	Chd8	ENSMUST00000089752	ENSMUSP00000087184	TRANSLATION	protein_coding	-	CCDS36919.1	1	2582	3	12.294	0.5	422.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095490	Gm7951	ENSMUST00000171388	ENSMUSP00000126311	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90.8	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000033446	Lpar6	ENSMUST00000044405	ENSMUSP00000042327	TRANSLATION	protein_coding	-	CCDS27268.1	-	344	0	0.6	6.4	171	0	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000033730	Egr3	ENSMUST00000223747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033730	Egr3	ENSMUST00000035908	ENSMUSP00000037042	TRANSLATION	protein_coding	-	-	1	349	12	0.6	7.5	102.8	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000033730	Egr3	ENSMUST00000223809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033730	Egr3	ENSMUST00000225200	ENSMUSP00000153491	TRANSLATION	protein_coding	-	CCDS27246.1	-	387	12	0.6	7.5	102.8	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000096793	Gm3002	ENSMUST00000178256	ENSMUSP00000137351	TRANSLATION	protein_coding	stop	-	1	148	0	0	0.5	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096793	Gm3002	ENSMUST00000170480	ENSMUSP00000126836	TRANSLATION	protein_coding	-	-	5	216	0	0	0	75.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036242	Armh4	ENSMUST00000036972	ENSMUSP00000036220	TRANSLATION	protein_coding	-	CCDS36903.1	1	775	0	0	0.5	733.5	1	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000036242	Armh4	ENSMUST00000118129	ENSMUSP00000113609	TRANSLATION	protein_coding	-	-	1	774	0	0	0.5	733.5	1	-1,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000036242	Armh4	ENSMUST00000177321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022176	Rem2	ENSMUST00000170337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022176	Rem2	ENSMUST00000164697	ENSMUSP00000132998	TRANSLATION	protein_coding	-	-	5	180	8	0.8	0	0	0	-4,-5	-	-	1.332	MINOR
ENSMUSG00000022176	Rem2	ENSMUST00000164766	ENSMUSP00000127199	TRANSLATION	protein_coding	-	CCDS27090.2	1	341	15	4.55	6.3	100.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022176	Rem2	ENSMUST00000168930	ENSMUSP00000131989	TRANSLATION	protein_coding	start	-	5	140	8	1.55	0	23.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022031	Elp3	ENSMUST00000224743	ENSMUSP00000153177	TRANSLATION	nonsense_mediated_decay	-	-	-	553	0	7.22	0	218.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022031	Elp3	ENSMUST00000022609	ENSMUSP00000022609	TRANSLATION	protein_coding	-	CCDS56965.1	1	566	0	7.97	1.5	225.8	0	-4,-6	-	-	12.152	MINOR
ENSMUSG00000022031	Elp3	ENSMUST00000225355	ENSMUSP00000153462	TRANSLATION	protein_coding	-	-	-	547	0	7.97	14.1	225.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000106289	Trav23	ENSMUST00000199137	ENSMUSP00000143388	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	0	0	-1,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000035469	Rcbtb1	ENSMUST00000043227	ENSMUSP00000037030	TRANSLATION	protein_coding	-	CCDS27168.1	1	531	0	9.044	13.3	289.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000035469	Rcbtb1	ENSMUST00000142326	ENSMUSP00000134542	TRANSLATION	protein_coding	stop	-	2	33	0	0.42	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035469	Rcbtb1	ENSMUST00000173547	ENSMUSP00000134360	TRANSLATION	protein_coding	stop	-	5	208	0	4.494	0	119.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035469	Rcbtb1	ENSMUST00000172810	ENSMUSP00000134284	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035469	Rcbtb1	ENSMUST00000022551	ENSMUSP00000022551	TRANSLATION	protein_coding	-	CCDS27168.1	1	531	0	9.044	13.3	289.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000035469	Rcbtb1	ENSMUST00000153225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035469	Rcbtb1	ENSMUST00000174009	ENSMUSP00000133369	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035469	Rcbtb1	ENSMUST00000147280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035469	Rcbtb1	ENSMUST00000140136	ENSMUSP00000134515	TRANSLATION	protein_coding	stop	-	3	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035469	Rcbtb1	ENSMUST00000095778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035469	Rcbtb1	ENSMUST00000174830	ENSMUSP00000133421	TRANSLATION	protein_coding	start	-	5	94	0	2.63	0	81.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021898	Asb14	ENSMUST00000165929	ENSMUSP00000129753	TRANSLATION	protein_coding	-	CCDS36842.2	1	569	0	4.9524	0.5	132.1	0	-4,-5	-	-	9.408	MINOR
ENSMUSG00000021898	Asb14	ENSMUST00000167929	ENSMUSP00000130428	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021898	Asb14	ENSMUST00000165305	ENSMUSP00000131669	TRANSLATION	nonsense_mediated_decay	start	-	5	118	0	1.498	0	54.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021898	Asb14	ENSMUST00000238987	ENSMUSP00000159151	TRANSLATION	protein_coding	-	-	-	587	0	4.9524	1.2	175.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021898	Asb14	ENSMUST00000239004	ENSMUSP00000159012	TRANSLATION	protein_coding	-	-	-	541	0	4.9524	0	132.1	0	-4,-5	-	-	9.408	MINOR
ENSMUSG00000021898	Asb14	ENSMUST00000090337	ENSMUSP00000087810	TRANSLATION	protein_coding	-	CCDS49431.1	5	615	0	4.9524	0.5	175.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000021898	Asb14	ENSMUST00000167365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076770	Trav8d-1	ENSMUST00000103580	ENSMUSP00000100357	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	62	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000095387	Trav6d-4	ENSMUST00000180717	ENSMUSP00000137863	TRANSLATION	TR_V_gene	stop	-	-	115	0	1.2	0	39.8	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000095387	Trav6d-4	ENSMUST00000183820	ENSMUSP00000139057	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.2	0	39.8	0	2,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000049295	Zfp219	ENSMUST00000228580	ENSMUSP00000153966	TRANSLATION	protein_coding	-	-	-	681	35	2.4	1.5	119.8	0	-4,-7	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000049295	Zfp219	ENSMUST00000166169	ENSMUSP00000126854	TRANSLATION	protein_coding	-	CCDS36916.1	1	726	35	2.88	1.5	119.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000049295	Zfp219	ENSMUST00000226964	ENSMUSP00000154448	TRANSLATION	protein_coding	stop	-	-	201	13	2.08	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000226605	ENSMUSP00000154367	TRANSLATION	protein_coding	stop	-	-	109	7	1.78	0	35.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000067549	ENSMUSP00000068184	TRANSLATION	protein_coding	-	CCDS36916.1	1	726	35	2.88	1.5	119.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000049295	Zfp219	ENSMUST00000228162	ENSMUSP00000154698	TRANSLATION	protein_coding	stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000227420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049295	Zfp219	ENSMUST00000226554	ENSMUSP00000154096	TRANSLATION	protein_coding	stop	-	-	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000226474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049295	Zfp219	ENSMUST00000228051	ENSMUSP00000153742	TRANSLATION	protein_coding	stop	-	-	95	6	1.28	0	19.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000228747	ENSMUSP00000154768	TRANSLATION	protein_coding	stop	-	-	141	8	2.08	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049295	Zfp219	ENSMUST00000226522	ENSMUSP00000154709	TRANSLATION	protein_coding	-	CCDS36916.1	-	726	35	2.88	1.5	119.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000049295	Zfp219	ENSMUST00000226527	ENSMUSP00000154200	TRANSLATION	protein_coding	stop	-	-	131	8	2.08	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096685	Gm3642	ENSMUST00000179296	ENSMUSP00000135975	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	81.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096685	Gm3642	ENSMUST00000166895	ENSMUSP00000127087	TRANSLATION	protein_coding	-	-	5	267	0	0	0	81.9	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000022221	Ripk3	ENSMUST00000228476	ENSMUSP00000153911	TRANSLATION	protein_coding	start/stop	-	-	160	0	0	0	27	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022221	Ripk3	ENSMUST00000227072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022221	Ripk3	ENSMUST00000022830	ENSMUSP00000022830	TRANSLATION	protein_coding	-	CCDS27131.1	1	486	20	5.91	0.5	188	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022221	Ripk3	ENSMUST00000228326	ENSMUSP00000154235	TRANSLATION	protein_coding	stop	-	-	158	10	2.33	0	88.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022221	Ripk3	ENSMUST00000228175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022221	Ripk3	ENSMUST00000178399	ENSMUSP00000137278	TRANSLATION	protein_coding	-	CCDS49499.1	1	422	10	4.25	0.5	153.3	0	-4,-6	-	-	6.6	MINOR
ENSMUSG00000022221	Ripk3	ENSMUST00000228077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022221	Ripk3	ENSMUST00000226203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022221	Ripk3	ENSMUST00000168716	ENSMUSP00000126306	TRANSLATION	protein_coding	-	CCDS49499.1	5	422	10	4.25	0.5	153.3	0	-4,-6	-	-	6.6	MINOR
ENSMUSG00000014547	Wdfy2	ENSMUST00000224948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014547	Wdfy2	ENSMUST00000014691	ENSMUSP00000014691	TRANSLATION	protein_coding	-	CCDS27192.1	1	400	8	6.634	15.8	114.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022130	Tgds	ENSMUST00000228543	ENSMUSP00000154426	TRANSLATION	protein_coding	-	-	-	343	47	9.37	0	250.7	0	-4,-2	-	-	17.898	MINOR
ENSMUSG00000022130	Tgds	ENSMUST00000227350	ENSMUSP00000153859	TRANSLATION	nonsense_mediated_decay	-	-	-	95	15	2.25	0	27.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022130	Tgds	ENSMUST00000228085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022130	Tgds	ENSMUST00000022727	ENSMUSP00000022727	TRANSLATION	protein_coding	-	CCDS27332.1	1	355	47	9.42	5.4	250.7	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000002324	Rec8	ENSMUST00000227922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002324	Rec8	ENSMUST00000155193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002324	Rec8	ENSMUST00000141425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002324	Rec8	ENSMUST00000002395	ENSMUSP00000002395	TRANSLATION	protein_coding	-	CCDS27120.1	1	591	0	0	1.5	153.3	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000089840	Gm4491	ENSMUST00000159455	ENSMUSP00000124944	TRANSLATION	protein_coding	-	-	1	125	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000042156	Dzip1	ENSMUST00000226960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042156	Dzip1	ENSMUST00000004055	ENSMUSP00000004055	TRANSLATION	protein_coding	-	CCDS37011.1	1	852	4	0	1.5	142.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000042156	Dzip1	ENSMUST00000228157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042156	Dzip1	ENSMUST00000228540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042156	Dzip1	ENSMUST00000226919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042156	Dzip1	ENSMUST00000227344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042156	Dzip1	ENSMUST00000047208	ENSMUSP00000039689	TRANSLATION	protein_coding	-	CCDS37011.1	5	852	4	0	1.5	142.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000042156	Dzip1	ENSMUST00000228142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042156	Dzip1	ENSMUST00000228861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042156	Dzip1	ENSMUST00000228687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090487	Gm2888	ENSMUST00000170521	ENSMUSP00000132602	TRANSLATION	protein_coding	-	-	5	267	0	0	0	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000090487	Gm2888	ENSMUST00000178577	ENSMUSP00000137316	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000040759	Cmtm5	ENSMUST00000037814	ENSMUSP00000036138	TRANSLATION	protein_coding	-	CCDS27105.1	1	156	0	0	6.3	0	5	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000040759	Cmtm5	ENSMUST00000226807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040759	Cmtm5	ENSMUST00000227441	ENSMUSP00000153874	TRANSLATION	protein_coding	-	-	-	105	0	0	1.7	0	3	-4,-6	-	-	0.264	MINOR
ENSMUSG00000079184	Mphosph8	ENSMUST00000130246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079184	Mphosph8	ENSMUST00000152606	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079184	Mphosph8	ENSMUST00000116468	ENSMUSP00000112170	TRANSLATION	protein_coding	-	CCDS49504.1	1	858	0	4.95	0.5	119.4	0	-3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000079184	Mphosph8	ENSMUST00000152370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079184	Mphosph8	ENSMUST00000138174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076882	Traj49	ENSMUST00000199452	ENSMUSP00000142947	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076882	Traj49	ENSMUST00000103694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076761	Trav5-1	ENSMUST00000103570	ENSMUSP00000100347	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	65.6	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000040640	Erc2	ENSMUST00000209752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040640	Erc2	ENSMUST00000224045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040640	Erc2	ENSMUST00000211145	ENSMUSP00000147886	TRANSLATION	protein_coding	-	-	1	957	7	0	3.6	1288.1	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000040640	Erc2	ENSMUST00000211684	ENSMUSP00000148033	TRANSLATION	protein_coding	-	-	5	51	0	0	0	31.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000040640	Erc2	ENSMUST00000209476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040640	Erc2	ENSMUST00000210524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040640	Erc2	ENSMUST00000211627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040640	Erc2	ENSMUST00000211636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040640	Erc2	ENSMUST00000210924	ENSMUSP00000147744	TRANSLATION	protein_coding	-	-	1	623	0	0	0.5	945	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040640	Erc2	ENSMUST00000210327	ENSMUSP00000148076	TRANSLATION	non_stop_decay	stop	-	5	251	7	0	0	130.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040640	Erc2	ENSMUST00000090302	ENSMUSP00000087773	TRANSLATION	protein_coding	-	CCDS26887.1	1	1002	7	0	0.5	1278.4	0	-4,-2	-	-	11.418	MINOR
ENSMUSG00000040640	Erc2	ENSMUST00000211087	ENSMUSP00000147814	TRANSLATION	protein_coding	stop	-	5	347	7	0	0	316.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040640	Erc2	ENSMUST00000209800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040640	Erc2	ENSMUST00000210135	ENSMUSP00000147981	TRANSLATION	protein_coding	-	CCDS84102.1	1	977	7	0	2.9	1269	0	-4,-2	-	-	11.585	MINOR
ENSMUSG00000089901	Gm8113	ENSMUST00000160298	ENSMUSP00000125038	TRANSLATION	protein_coding	-	-	1	587	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000042286	Stab1	ENSMUST00000161129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000160720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000162763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000036618	ENSMUSP00000046199	TRANSLATION	protein_coding	-	CCDS26906.1	1	2571	0	10.185	1.5	524.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000042286	Stab1	ENSMUST00000161631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000159208	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042286	Stab1	ENSMUST00000160024	ENSMUSP00000125239	TRANSLATION	protein_coding	start	-	3	92	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042286	Stab1	ENSMUST00000162169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000159757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000159480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000161464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000159532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042286	Stab1	ENSMUST00000159249	ENSMUSP00000125542	TRANSLATION	protein_coding	start/stop	-	5	197	0	1.28	0	21.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076764	Trav6-2	ENSMUST00000198058	ENSMUSP00000142452	TRANSLATION	TR_V_gene	stop	-	-	113	0	1.3	0	40.6	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076764	Trav6-2	ENSMUST00000103573	ENSMUSP00000100350	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	40.6	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000050028	Olfr745	ENSMUST00000213127	ENSMUSP00000153971	TRANSLATION	protein_coding	-	-	5	322	0	0.42	0	181.8	6	-4,-7	-	-	12	MINOR
ENSMUSG00000050028	Olfr745	ENSMUST00000216105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050028	Olfr745	ENSMUST00000062534	ENSMUSP00000050184	TRANSLATION	protein_coding	-	CCDS27020.1	-	328	0	0.42	6.3	181.8	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000093887	Gm3033	ENSMUST00000112792	ENSMUSP00000108412	TRANSLATION	protein_coding	-	-	5	145	0	0	0.5	48.4	0	-4,-5	-	-	4.086	PRINCIPAL:1
ENSMUSG00000093887	Gm3033	ENSMUST00000180934	ENSMUSP00000137839	TRANSLATION	protein_coding	start	-	1	180	0	0	0	71.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015971	Actr8	ENSMUST00000224343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015971	Actr8	ENSMUST00000225161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015971	Actr8	ENSMUST00000224067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015971	Actr8	ENSMUST00000225793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015971	Actr8	ENSMUST00000224797	ENSMUSP00000153076	TRANSLATION	protein_coding	-	CCDS26891.1	-	624	13	12.9	10.8	108.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015971	Actr8	ENSMUST00000016115	ENSMUSP00000016115	TRANSLATION	protein_coding	-	CCDS26891.1	1	624	13	12.9	10.8	108.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015971	Actr8	ENSMUST00000224846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015971	Actr8	ENSMUST00000225811	ENSMUSP00000153459	TRANSLATION	protein_coding	stop	-	-	160	0	3.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015971	Actr8	ENSMUST00000225368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095689	Trav12d-1	ENSMUST00000183652	ENSMUSP00000138881	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	49.3	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095689	Trav12d-1	ENSMUST00000181360	ENSMUSP00000137870	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	49.3	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000021963	Sap18	ENSMUST00000111269	ENSMUSP00000106900	TRANSLATION	protein_coding	-	-	2	107	0	2	0	61.3	0	-4,-2	-	-	2.862	MINOR
ENSMUSG00000021963	Sap18	ENSMUST00000111268	ENSMUSP00000106899	TRANSLATION	protein_coding	-	-	2	92	0	2	0	70.3	0	-4,-5	-	-	3.402	MINOR
ENSMUSG00000021963	Sap18	ENSMUST00000143600	ENSMUSP00000121525	TRANSLATION	protein_coding	-	-	1	111	0	2.5	0	103.9	0	-4,-5	-	-	6.42	MINOR
ENSMUSG00000021963	Sap18	ENSMUST00000131455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021963	Sap18	ENSMUST00000111267	ENSMUSP00000106898	TRANSLATION	protein_coding	-	-	2	92	0	2	0	70.3	0	-4,-5	-	-	3.402	MINOR
ENSMUSG00000021963	Sap18	ENSMUST00000128764	ENSMUSP00000120071	TRANSLATION	protein_coding	-	CCDS27159.2	1	172	0	4	8.8	146.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000047716	Olfr736	ENSMUST00000213755	ENSMUSP00000148975	TRANSLATION	protein_coding	-	CCDS27013.1	5	312	0	0.32	5.2	154.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047716	Olfr736	ENSMUST00000058965	ENSMUSP00000062700	TRANSLATION	protein_coding	-	CCDS27013.1	-	312	0	0.32	5.2	154.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047716	Olfr736	ENSMUST00000215227	ENSMUSP00000150611	TRANSLATION	protein_coding	-	CCDS27013.1	5	312	0	0.32	5.2	154.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047716	Olfr736	ENSMUST00000213402	ENSMUSP00000150576	TRANSLATION	protein_coding	-	CCDS27013.1	5	312	0	0.32	5.2	154.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047716	Olfr736	ENSMUST00000215263	ENSMUSP00000149654	TRANSLATION	protein_coding	-	CCDS27013.1	5	312	0	0.32	5.2	154.2	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000021779	Thrb	ENSMUST00000022303	ENSMUSP00000022303	TRANSLATION	protein_coding	-	CCDS49404.1	5	461	27	6.15	7.5	166.7	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000021779	Thrb	ENSMUST00000091471	ENSMUSP00000089053	TRANSLATION	protein_coding	-	CCDS49404.1	1	461	27	6.15	7.5	166.7	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000021779	Thrb	ENSMUST00000022304	ENSMUSP00000022304	TRANSLATION	protein_coding	-	CCDS26835.1	1	475	27	6	7.3	166.7	0	-4,-5	-	-	20.607	PRINCIPAL:3
ENSMUSG00000021779	Thrb	ENSMUST00000224597	ENSMUSP00000153055	TRANSLATION	protein_coding	stop	-	-	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021779	Thrb	ENSMUST00000224438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021779	Thrb	ENSMUST00000224470	ENSMUSP00000153230	TRANSLATION	protein_coding	stop	-	-	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021779	Thrb	ENSMUST00000224934	ENSMUSP00000153355	TRANSLATION	protein_coding	stop	-	-	212	8	3.15	0	104.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095384	1700001F09Rik	ENSMUST00000178178	ENSMUSP00000136772	TRANSLATION	protein_coding	-	CCDS49459.1	1	184	0	0	0.5	67.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021929	Kpna3	ENSMUST00000022496	ENSMUSP00000022496	TRANSLATION	protein_coding	-	CCDS36942.1	1	521	0	13.19	15.5	449.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021929	Kpna3	ENSMUST00000225207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000093966	Trav4-3	ENSMUST00000103655	ENSMUSP00000100432	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	46	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021997	Lrrc63	ENSMUST00000022574	ENSMUSP00000022574	TRANSLATION	protein_coding	-	CCDS49539.1	1	638	0	3.96	0.5	37.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000091814	Gm8050	ENSMUST00000171987	ENSMUSP00000132887	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	74.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090364	Gm3043	ENSMUST00000170639	ENSMUSP00000127050	TRANSLATION	protein_coding	-	-	1	218	0	0	0.5	68.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076907	Traj22	ENSMUST00000103719	ENSMUSP00000142342	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091809	Olfr721-ps1	ENSMUST00000165291	ENSMUSP00000133126	TRANSLATION	protein_coding	start	-	-	324	0	0.28	1	154.8	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000091809	Olfr721-ps1	ENSMUST00000215479	ENSMUSP00000150661	TRANSLATION	protein_coding	-	-	5	322	0	0.28	1	154.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000091809	Olfr721-ps1	ENSMUST00000206688	ENSMUSP00000146190	TRANSLATION	protein_coding	-	-	-	322	0	0.28	1	154.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041534	Rbp3	ENSMUST00000035695	ENSMUSP00000040249	TRANSLATION	protein_coding	-	CCDS26929.1	1	1234	0	1.6	1.5	735	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021789	Sftpa1	ENSMUST00000022314	ENSMUSP00000022314	TRANSLATION	protein_coding	-	CCDS26960.1	1	248	7	2.15	3.9	74	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000021789	Sftpa1	ENSMUST00000170719	ENSMUSP00000129696	TRANSLATION	protein_coding	-	CCDS26960.1	1	248	7	2.15	3.9	74	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000061517	Sox21	ENSMUST00000170662	ENSMUSP00000127396	TRANSLATION	protein_coding	-	CCDS27334.1	-	276	0	0.6	4.1	125.7	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000115232	Gm49378	ENSMUST00000156420	ENSMUSP00000154468	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	143	0	0	0	120.6	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000095044	Gm6401	ENSMUST00000164232	ENSMUSP00000133168	TRANSLATION	protein_coding	stop	-	5	206	0	0	0	86.7	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095044	Gm6401	ENSMUST00000163566	ENSMUSP00000129907	TRANSLATION	protein_coding	start	-	5	213	0	0	0	86.7	0	-4,-7	-	-	-1	PRINCIPAL:5
ENSMUSG00000043004	Gng2	ENSMUST00000160013	ENSMUSP00000125697	TRANSLATION	protein_coding	-	CCDS26840.1	1	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000043004	Gng2	ENSMUST00000162425	ENSMUSP00000124153	TRANSLATION	protein_coding	-	CCDS26840.1	3	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000043004	Gng2	ENSMUST00000159073	ENSMUSP00000125000	TRANSLATION	protein_coding	-	CCDS26840.1	2	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000043004	Gng2	ENSMUST00000161247	ENSMUSP00000124725	TRANSLATION	protein_coding	-	CCDS26840.1	3	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000043004	Gng2	ENSMUST00000159028	ENSMUSP00000125141	TRANSLATION	protein_coding	-	CCDS26840.1	2	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000043004	Gng2	ENSMUST00000055100	ENSMUSP00000055256	TRANSLATION	protein_coding	-	CCDS26840.1	3	71	0	1.75	18.2	70.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000022208	Jph4	ENSMUST00000132992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022208	Jph4	ENSMUST00000124493	ENSMUSP00000121893	TRANSLATION	protein_coding	-	CCDS27109.1	1	628	0	0	7.5	126.3	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022208	Jph4	ENSMUST00000022819	ENSMUSP00000022819	TRANSLATION	protein_coding	-	CCDS27109.1	1	628	0	0	7.5	126.3	1	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022208	Jph4	ENSMUST00000133954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035095	Fam167a	ENSMUST00000121288	ENSMUSP00000113962	TRANSLATION	protein_coding	-	CCDS27201.1	1	215	0	0	1.5	133.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035095	Fam167a	ENSMUST00000128313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000163088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000160538	ENSMUSP00000124259	TRANSLATION	protein_coding	stop	-	5	283	10	0	0	264.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035953	Pip4p1	ENSMUST00000049312	ENSMUSP00000038276	TRANSLATION	protein_coding	-	CCDS79324.1	1	277	12	0	6.3	419.2	2	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000035953	Pip4p1	ENSMUST00000160835	ENSMUSP00000124782	TRANSLATION	protein_coding	-	CCDS27028.1	1	284	12	0	6.3	419.2	2	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000035953	Pip4p1	ENSMUST00000161166	ENSMUSP00000125414	TRANSLATION	protein_coding	-	CCDS79323.1	1	231	7	0	2.7	193.5	0	-4,-5	-	-	3.306	MINOR
ENSMUSG00000035953	Pip4p1	ENSMUST00000161669	ENSMUSP00000125281	TRANSLATION	protein_coding	start	-	1	98	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035953	Pip4p1	ENSMUST00000159745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000163043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000159047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000162935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035953	Pip4p1	ENSMUST00000162957	ENSMUSP00000123697	TRANSLATION	protein_coding	-	CCDS79322.1	1	238	7	0	2.7	193.2	0	-4,-5	-	-	3.306	MINOR
ENSMUSG00000021879	Dnah12	ENSMUST00000022433	ENSMUSP00000022433	TRANSLATION	protein_coding	-	-	5	3960	64	36.37	3.9	2649.3	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021879	Dnah12	ENSMUST00000073309	ENSMUSP00000073035	TRANSLATION	protein_coding	start/stop	-	1	203	11	3.5	0	268.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021870	Slmap	ENSMUST00000134117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021870	Slmap	ENSMUST00000136635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021870	Slmap	ENSMUST00000125437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021870	Slmap	ENSMUST00000146438	ENSMUSP00000123344	TRANSLATION	protein_coding	start/stop	-	5	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021870	Slmap	ENSMUST00000139075	ENSMUSP00000117816	TRANSLATION	protein_coding	-	CCDS79284.1	1	845	0	0	7.5	59.8	1	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000021870	Slmap	ENSMUST00000142679	ENSMUSP00000123072	TRANSLATION	protein_coding	start	-	5	433	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000021870	Slmap	ENSMUST00000038522	ENSMUSP00000046956	TRANSLATION	protein_coding	-	CCDS26880.1	1	821	0	0	7.5	59.8	1	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000021870	Slmap	ENSMUST00000102956	ENSMUSP00000100021	TRANSLATION	protein_coding	-	CCDS26880.1	5	821	0	0	7.5	59.8	1	-4,-7	-	-	9	PRINCIPAL:3
ENSMUSG00000021870	Slmap	ENSMUST00000090359	ENSMUSP00000087836	TRANSLATION	protein_coding	-	-	5	828	0	0	7.5	59.8	1	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000021870	Slmap	ENSMUST00000129920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021870	Slmap	ENSMUST00000145738	ENSMUSP00000117276	TRANSLATION	protein_coding	start	-	1	477	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000021870	Slmap	ENSMUST00000112330	ENSMUSP00000107949	TRANSLATION	protein_coding	-	CCDS84099.1	5	790	0	0	7.5	59.8	1	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000021870	Slmap	ENSMUST00000127078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021870	Slmap	ENSMUST00000144737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021870	Slmap	ENSMUST00000112331	ENSMUSP00000107950	TRANSLATION	protein_coding	start	-	5	690	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000021870	Slmap	ENSMUST00000136625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049960	Mrps16	ENSMUST00000061444	ENSMUSP00000055619	TRANSLATION	protein_coding	-	CCDS36817.1	1	135	0	2	6.3	80.1	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000049960	Mrps16	ENSMUST00000224286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032849	Abcc4	ENSMUST00000226703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032849	Abcc4	ENSMUST00000036554	ENSMUSP00000042186	TRANSLATION	protein_coding	-	CCDS27335.1	1	1325	24	23.76	1.5	461.7	8	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032849	Abcc4	ENSMUST00000166646	ENSMUSP00000129677	TRANSLATION	protein_coding	-	CCDS49565.1	1	1250	24	23.28	0.5	415.7	8	-4,-6	-	-	14.28	MINOR
ENSMUSG00000032849	Abcc4	ENSMUST00000227480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032849	Abcc4	ENSMUST00000228691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032849	Abcc4	ENSMUST00000228848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096168	Trav5n-4	ENSMUST00000179997	ENSMUSP00000137359	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	63.5	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000057606	Colq	ENSMUST00000129238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057606	Colq	ENSMUST00000124014	ENSMUSP00000116916	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057606	Colq	ENSMUST00000146302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057606	Colq	ENSMUST00000112027	ENSMUSP00000107658	TRANSLATION	protein_coding	-	CCDS36856.2	1	457	7	5.7	4.1	63.8	0	-2,-4	-	-	18.874	PRINCIPAL:2
ENSMUSG00000057606	Colq	ENSMUST00000150054	ENSMUSP00000121065	TRANSLATION	protein_coding	-	-	5	447	7	5.7	0.5	65.2	0	-1,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000094925	Gm5798	ENSMUST00000164613	ENSMUSP00000128907	TRANSLATION	protein_coding	-	-	5	198	0	0	0.5	85.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094925	Gm5798	ENSMUST00000179987	ENSMUSP00000137056	TRANSLATION	protein_coding	stop	-	3	194	0	0	0.5	85.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000092142	Gm6482	ENSMUST00000168128	ENSMUSP00000129770	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90.8	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000010406	Mrpl52	ENSMUST00000228871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010406	Mrpl52	ENSMUST00000199153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010406	Mrpl52	ENSMUST00000199195	ENSMUSP00000142555	TRANSLATION	protein_coding	-	-	1	63	0	1.8	3.6	0	0	-4,-2	-	-	3.378	MINOR
ENSMUSG00000010406	Mrpl52	ENSMUST00000200217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010406	Mrpl52	ENSMUST00000196273	ENSMUSP00000142643	TRANSLATION	protein_coding	start	-	5	68	0	1.25	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000010406	Mrpl52	ENSMUST00000010550	ENSMUSP00000010550	TRANSLATION	protein_coding	-	CCDS27088.1	1	121	0	3.71	7.5	0	0	-3,1	-	-	9	PRINCIPAL:1
ENSMUSG00000010406	Mrpl52	ENSMUST00000199689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072707	Olfr31	ENSMUST00000100872	ENSMUSP00000098434	TRANSLATION	protein_coding	-	CCDS26826.1	-	317	0	0.42	2.8	166.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000072707	Olfr31	ENSMUST00000206009	ENSMUSP00000146305	TRANSLATION	protein_coding	-	CCDS26826.1	2	317	0	0.42	2.8	166.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000072707	Olfr31	ENSMUST00000217035	ENSMUSP00000149019	TRANSLATION	protein_coding	-	CCDS26826.1	5	317	0	0.42	2.8	166.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025558	Dock9	ENSMUST00000211803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025558	Dock9	ENSMUST00000100299	ENSMUSP00000097872	TRANSLATION	protein_coding	-	CCDS49569.1	1	2058	10	12.75	1.5	1049.7	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000025558	Dock9	ENSMUST00000212371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025558	Dock9	ENSMUST00000239077	ENSMUSP00000159030	TRANSLATION	protein_coding	-	-	-	2055	10	12.5	1.7	1027.7	0	-4,-6	-	-	16.182	MINOR
ENSMUSG00000025558	Dock9	ENSMUST00000212376	ENSMUSP00000148328	TRANSLATION	protein_coding	-	CCDS84162.1	5	2042	10	12.75	0.5	1042.5	0	-4,-6	-	-	17.568	ALTERNATIVE:2
ENSMUSG00000025558	Dock9	ENSMUST00000040700	ENSMUSP00000047881	TRANSLATION	protein_coding	-	CCDS37018.1	2	2113	10	12.375	1.5	1042.7	0	-4,-5	-	-	16.83	MINOR
ENSMUSG00000025558	Dock9	ENSMUST00000212416	ENSMUSP00000148303	TRANSLATION	nonsense_mediated_decay	start	-	5	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025558	Dock9	ENSMUST00000212719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025558	Dock9	ENSMUST00000211907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025558	Dock9	ENSMUST00000212181	ENSMUSP00000148834	TRANSLATION	protein_coding	-	CCDS84161.1	1	2088	10	12.75	1.5	1049.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025558	Dock9	ENSMUST00000238406	ENSMUSP00000158723	TRANSLATION	protein_coding	start/stop	-	-	133	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025558	Dock9	ENSMUST00000211993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096183	Gm3727	ENSMUST00000178251	ENSMUSP00000136127	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	63.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000096183	Gm3727	ENSMUST00000168458	ENSMUSP00000128268	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	63.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021809	Nudt13	ENSMUST00000223941	ENSMUSP00000153437	TRANSLATION	protein_coding	stop	-	-	197	3	0.85	0	102	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021809	Nudt13	ENSMUST00000225442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000223566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000022343	ENSMUSP00000022343	TRANSLATION	protein_coding	-	CCDS36815.1	1	352	12	2.85	1.5	159.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021809	Nudt13	ENSMUST00000225722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021809	Nudt13	ENSMUST00000224354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000225440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000224066	ENSMUSP00000153582	TRANSLATION	protein_coding	stop	-	-	137	2	0.4	0	25.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021809	Nudt13	ENSMUST00000225314	ENSMUSP00000153266	TRANSLATION	nonsense_mediated_decay	-	-	-	146	0	0	0	34.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021809	Nudt13	ENSMUST00000223663	ENSMUSP00000153558	TRANSLATION	protein_coding	-	CCDS36815.1	-	352	12	2.85	1.5	159.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021809	Nudt13	ENSMUST00000224169	ENSMUSP00000153164	TRANSLATION	nonsense_mediated_decay	-	-	-	146	0	0	0	34.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021809	Nudt13	ENSMUST00000224311	ENSMUSP00000153615	TRANSLATION	protein_coding	-	-	-	322	10	2.4	0	121.5	0	-4,0	-	-	13.452	MINOR
ENSMUSG00000021809	Nudt13	ENSMUST00000224377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000224674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021809	Nudt13	ENSMUST00000225354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021809	Nudt13	ENSMUST00000225728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021751	Acox2	ENSMUST00000170534	ENSMUSP00000130543	TRANSLATION	protein_coding	stop	-	5	201	9	3.73	0	95.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021751	Acox2	ENSMUST00000165169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021751	Acox2	ENSMUST00000164598	ENSMUSP00000126464	TRANSLATION	protein_coding	-	CCDS36801.1	1	681	32	12.29	3.9	341.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021751	Acox2	ENSMUST00000116361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021751	Acox2	ENSMUST00000164412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021751	Acox2	ENSMUST00000022271	ENSMUSP00000022271	TRANSLATION	protein_coding	-	CCDS36801.1	1	681	32	12.29	3.9	341.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021751	Acox2	ENSMUST00000171567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021751	Acox2	ENSMUST00000171175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040284	Gzmg	ENSMUST00000015578	ENSMUSP00000015578	TRANSLATION	protein_coding	-	CCDS27144.1	1	248	7	4.12	0.5	200.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000091144	Phf11c	ENSMUST00000166912	ENSMUSP00000131536	TRANSLATION	protein_coding	-	CCDS49512.1	1	339	12	1.92	0.5	54.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000091418	Gm3164	ENSMUST00000168866	ENSMUSP00000129814	TRANSLATION	protein_coding	-	-	5	238	0	0	0	75.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000076760	Trav3-1	ENSMUST00000103569	ENSMUSP00000100346	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	52	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000006527	Sfmbt1	ENSMUST00000227303	ENSMUSP00000153962	TRANSLATION	protein_coding	-	-	-	820	0	10.396	0	412.9	0	-4,-5	-	-	8.574	MINOR
ENSMUSG00000006527	Sfmbt1	ENSMUST00000227445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006527	Sfmbt1	ENSMUST00000228006	ENSMUSP00000153861	TRANSLATION	protein_coding	-	CCDS26897.1	-	863	0	10.996	7.5	450	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006527	Sfmbt1	ENSMUST00000054230	ENSMUSP00000056744	TRANSLATION	protein_coding	-	CCDS26897.1	5	863	0	10.996	7.5	450	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006527	Sfmbt1	ENSMUST00000112184	ENSMUSP00000107802	TRANSLATION	protein_coding	-	CCDS26897.1	5	863	0	10.996	7.5	450	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006527	Sfmbt1	ENSMUST00000227201	ENSMUSP00000154646	TRANSLATION	protein_coding	stop	-	-	636	0	9.396	0	412.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076863	Trav21-dv12	ENSMUST00000180938	ENSMUSP00000137998	TRANSLATION	TR_V_gene	stop	-	-	109	0	1	0	37.8	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076906	Traj23	ENSMUST00000103718	ENSMUSP00000142485	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000060373	Hnrnpc	ENSMUST00000164655	ENSMUSP00000133052	TRANSLATION	protein_coding	-	CCDS36917.1	5	313	0	2.8	1.5	51.4	0	-4,-7	-	-	12.066	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000227195	ENSMUSP00000154537	TRANSLATION	protein_coding	stop	-	-	117	0	2.698	0	51.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228815	ENSMUSP00000154347	TRANSLATION	protein_coding	stop	-	-	28	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000227536	ENSMUSP00000154737	TRANSLATION	protein_coding	-	-	-	300	0	2.8	1.5	51.4	0	-4,-7	-	-	12.066	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000226993	ENSMUSP00000154182	TRANSLATION	protein_coding	stop	-	-	80	0	1.75	0	52.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060373	Hnrnpc	ENSMUST00000111610	ENSMUSP00000107237	TRANSLATION	protein_coding	-	CCDS36917.1	1	313	0	2.8	1.5	51.4	0	-4,-7	-	-	12.066	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000227242	ENSMUSP00000154757	TRANSLATION	protein_coding	-	-	-	300	0	2.8	1.5	51.4	0	-4,-7	-	-	12.066	MINOR
ENSMUSG00000060373	Hnrnpc	ENSMUST00000227458	ENSMUSP00000154238	TRANSLATION	protein_coding	-	-	-	292	0	2.8	8.8	51.4	0	-4,-7	-	-	14.874	ALTERNATIVE:1
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228232	ENSMUSP00000154619	TRANSLATION	protein_coding	-	-	-	293	0	2.8	8.8	51.4	0	-4,-7	-	-	14.874	ALTERNATIVE:1
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228748	ENSMUSP00000154166	TRANSLATION	protein_coding	-	-	-	293	0	2.8	8.8	51.4	0	-4,-7	-	-	14.874	ALTERNATIVE:1
ENSMUSG00000060373	Hnrnpc	ENSMUST00000228198	ENSMUSP00000154212	TRANSLATION	protein_coding	-	-	-	306	0	2.8	8.8	51.4	0	-4,-7	-	-	14.874	PRINCIPAL:5
ENSMUSG00000068407	Rnase12	ENSMUST00000227764	ENSMUSP00000154201	TRANSLATION	protein_coding	-	CCDS27032.1	-	145	11	0.6	1.5	87.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000068407	Rnase12	ENSMUST00000089798	ENSMUSP00000087231	TRANSLATION	protein_coding	-	CCDS27032.1	-	145	11	0.6	1.5	87.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021799	Opn4	ENSMUST00000168444	ENSMUSP00000126136	TRANSLATION	protein_coding	-	CCDS49446.1	1	466	14	5	0.5	194	7	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021799	Opn4	ENSMUST00000022331	ENSMUSP00000022331	TRANSLATION	protein_coding	-	CCDS26943.1	1	521	14	5	0.5	194	7	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021799	Opn4	ENSMUST00000226806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052099	Prss51	ENSMUST00000170709	ENSMUSP00000126778	TRANSLATION	protein_coding	stop	-	3	94	1	0.9	0	42.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052099	Prss51	ENSMUST00000063785	ENSMUSP00000066111	TRANSLATION	protein_coding	-	CCDS84145.1	1	222	5	1.96	0.5	106.7	0	-4,-5	-	-	9.432	MINOR
ENSMUSG00000052099	Prss51	ENSMUST00000224112	ENSMUSP00000153617	TRANSLATION	protein_coding	-	-	-	319	6	3.854	0	169.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000052099	Prss51	ENSMUST00000165710	ENSMUSP00000132814	TRANSLATION	protein_coding	-	CCDS56964.1	1	240	6	2.224	1.5	110.3	0	-4,-7	-	-	11.178	MINOR
ENSMUSG00000076912	Traj17	ENSMUST00000103724	ENSMUSP00000142713	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000042485	Mustn1	ENSMUST00000040715	ENSMUSP00000048427	TRANSLATION	protein_coding	-	CCDS36849.1	1	82	0	0	6.3	131.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000091898	Tnnc1	ENSMUST00000169169	ENSMUSP00000131991	TRANSLATION	protein_coding	-	CCDS36854.1	1	161	19	4.32	21.5	112.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000091898	Tnnc1	ENSMUST00000161399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091898	Tnnc1	ENSMUST00000170268	ENSMUSP00000128765	TRANSLATION	nonsense_mediated_decay	-	-	5	106	7	2.66	0	56.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093926	Gm17027	ENSMUST00000171202	ENSMUSP00000128369	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000041703	Zic5	ENSMUST00000039118	ENSMUSP00000035754	TRANSLATION	protein_coding	-	CCDS27348.1	1	622	21	1	0.5	64.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000041703	Zic5	ENSMUST00000143084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034959	Rubcnl	ENSMUST00000036072	ENSMUSP00000045566	TRANSLATION	protein_coding	-	CCDS36977.1	1	675	12	0	0.5	213	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034959	Rubcnl	ENSMUST00000228689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090740	Gm17079	ENSMUST00000167231	ENSMUSP00000125788	TRANSLATION	protein_coding	-	-	5	211	0	0	0	87.1	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000019027	Dnah1	ENSMUST00000228429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019027	Dnah1	ENSMUST00000048603	ENSMUSP00000043281	TRANSLATION	protein_coding	-	CCDS49436.1	5	4250	60	37.175	1.5	2685	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095015	Gm16434	ENSMUST00000100888	ENSMUSP00000098448	TRANSLATION	protein_coding	-	-	1	205	0	0	0.5	84.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000095015	Gm16434	ENSMUST00000177712	ENSMUSP00000136540	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	84.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091584	Gm8180	ENSMUST00000163599	ENSMUSP00000131109	TRANSLATION	protein_coding	-	-	5	145	0	0	0	76	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021932	Rnaseh2b	ENSMUST00000169728	ENSMUSP00000132267	TRANSLATION	nonsense_mediated_decay	start	-	3	44	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021932	Rnaseh2b	ENSMUST00000022499	ENSMUSP00000022499	TRANSLATION	protein_coding	-	CCDS27189.1	1	308	0	9.08	2.7	184.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021932	Rnaseh2b	ENSMUST00000166879	ENSMUSP00000129165	TRANSLATION	protein_coding	stop	-	3	65	0	2	0	59.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021932	Rnaseh2b	ENSMUST00000156608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052382	Rnase9	ENSMUST00000064214	ENSMUSP00000066637	TRANSLATION	protein_coding	-	CCDS36909.1	1	184	0	0.4	1.5	73.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000076802	Trav6n-6	ENSMUST00000181793	ENSMUSP00000137708	TRANSLATION	TR_V_gene	stop	-	-	114	0	1.4	0	47.7	0	2,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076802	Trav6n-6	ENSMUST00000103613	ENSMUSP00000100390	TRANSLATION	TR_V_gene	start/stop	-	-	95	0	1	0	47.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000072624	Gm5460	ENSMUST00000226499	ENSMUSP00000154151	TRANSLATION	protein_coding	start/stop	-	-	165	0	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072624	Gm5460	ENSMUST00000227383	ENSMUSP00000154683	TRANSLATION	protein_coding	start	-	-	529	0	3.978	0.5	134.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072624	Gm5460	ENSMUST00000227522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072624	Gm5460	ENSMUST00000100719	ENSMUSP00000098285	TRANSLATION	protein_coding	-	CCDS49442.1	1	254	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094157	Gm7995	ENSMUST00000089789	ENSMUSP00000087222	TRANSLATION	protein_coding	start/stop	-	5	143	0	0	0	84.5	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094157	Gm7995	ENSMUST00000171967	ENSMUSP00000132956	TRANSLATION	protein_coding	start	-	5	160	0	0	0	84.5	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000072601	Ear1	ENSMUST00000100691	ENSMUSP00000098256	TRANSLATION	protein_coding	-	CCDS26964.1	1	155	5	1	0.5	111.9	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000072601	Ear1	ENSMUST00000179200	ENSMUSP00000136385	TRANSLATION	protein_coding	-	CCDS26964.1	1	155	5	1	0.5	111.9	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000006529	Itih1	ENSMUST00000227938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006529	Itih1	ENSMUST00000006704	ENSMUSP00000006704	TRANSLATION	protein_coding	-	CCDS79287.1	1	911	4	1.58	0.5	385.4	0	2,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000006529	Itih1	ENSMUST00000163118	ENSMUSP00000126449	TRANSLATION	protein_coding	-	CCDS49435.1	1	907	4	1.58	0.5	385.4	0	2,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000033214	Slitrk5	ENSMUST00000227891	ENSMUSP00000154387	TRANSLATION	protein_coding	stop	-	-	132	0	0.64	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033214	Slitrk5	ENSMUST00000042767	ENSMUSP00000041499	TRANSLATION	protein_coding	-	CCDS27328.1	2	957	0	1	5.1	111.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049235	Gm7324	ENSMUST00000228507	ENSMUSP00000154111	TRANSLATION	protein_coding	stop	-	-	30	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049235	Gm7324	ENSMUST00000094051	ENSMUSP00000154633	TRANSLATION	protein_coding	-	-	-	388	0	1.4	1.5	160.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000076886	Traj44	ENSMUST00000103698	ENSMUSP00000142599	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000075571	Defb30	ENSMUST00000111207	ENSMUSP00000106838	TRANSLATION	protein_coding	-	CCDS36947.1	1	75	0	0	2.7	39.2	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000075571	Defb30	ENSMUST00000111208	ENSMUSP00000106839	TRANSLATION	protein_coding	-	-	1	76	0	0	0	39.2	0	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000075571	Defb30	ENSMUST00000100490	ENSMUSP00000098059	TRANSLATION	protein_coding	-	CCDS36947.1	1	75	0	0	2.7	39.2	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000075571	Defb30	ENSMUST00000111209	ENSMUSP00000106840	TRANSLATION	protein_coding	-	-	1	76	0	0	0	39.2	0	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033589	Reep4	ENSMUST00000226556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033589	Reep4	ENSMUST00000047218	ENSMUSP00000040162	TRANSLATION	protein_coding	-	CCDS27256.1	1	257	0	0	7.5	96.8	1	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000033589	Reep4	ENSMUST00000227013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033589	Reep4	ENSMUST00000226592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033589	Reep4	ENSMUST00000228444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033589	Reep4	ENSMUST00000226563	ENSMUSP00000154206	TRANSLATION	protein_coding	-	-	-	293	0	0	0.5	87	1	3,-2	-	-	5.394	MINOR
ENSMUSG00000034248	Slc25a37	ENSMUST00000183882	ENSMUSP00000139178	TRANSLATION	protein_coding	stop	-	3	100	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034248	Slc25a37	ENSMUST00000184914	ENSMUSP00000139104	TRANSLATION	nonsense_mediated_decay	-	-	1	182	0	0.88	0	74.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034248	Slc25a37	ENSMUST00000184497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034248	Slc25a37	ENSMUST00000037064	ENSMUSP00000039990	TRANSLATION	protein_coding	-	CCDS27238.1	1	338	0	1.42	6.3	213.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000034795	Ccdc122	ENSMUST00000175810	ENSMUSP00000135167	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034795	Ccdc122	ENSMUST00000095625	ENSMUSP00000093285	TRANSLATION	protein_coding	-	CCDS79346.1	1	118	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034795	Ccdc122	ENSMUST00000048208	ENSMUSP00000036369	TRANSLATION	protein_coding	-	CCDS27288.1	1	290	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000034795	Ccdc122	ENSMUST00000137110	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015759	Cnih1	ENSMUST00000227583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015759	Cnih1	ENSMUST00000015903	ENSMUSP00000015903	TRANSLATION	protein_coding	-	CCDS26980.1	1	144	0	0	21.5	167.1	3	2,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000015759	Cnih1	ENSMUST00000146629	ENSMUSP00000116885	TRANSLATION	protein_coding	-	-	5	160	0	0	6.4	155.6	3	1,-3	-	-	6.362	MINOR
ENSMUSG00000045871	Slitrk6	ENSMUST00000078386	ENSMUSP00000077492	TRANSLATION	protein_coding	-	CCDS27326.1	1	840	0	0.28	2.7	101.2	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000022020	Naa16	ENSMUST00000169500	ENSMUSP00000127298	TRANSLATION	nonsense_mediated_decay	-	-	3	76	0	1.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022020	Naa16	ENSMUST00000171928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022020	Naa16	ENSMUST00000022597	ENSMUSP00000022597	TRANSLATION	protein_coding	-	CCDS27296.1	1	864	0	13.28	1.5	746.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022020	Naa16	ENSMUST00000165337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022020	Naa16	ENSMUST00000227775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022020	Naa16	ENSMUST00000163486	ENSMUSP00000131268	TRANSLATION	nonsense_mediated_decay	-	-	5	496	0	9.76	0	496.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096541	Trav9n-3	ENSMUST00000177705	ENSMUSP00000136185	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	52.8	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021993	Mipep	ENSMUST00000223709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021993	Mipep	ENSMUST00000225043	ENSMUSP00000153184	TRANSLATION	protein_coding	-	-	-	210	0	1.84	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000021993	Mipep	ENSMUST00000063562	ENSMUSP00000069840	TRANSLATION	protein_coding	-	CCDS49517.1	1	711	5	9.5	1.5	476.1	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000021993	Mipep	ENSMUST00000225506	ENSMUSP00000153374	TRANSLATION	nonsense_mediated_decay	-	-	-	568	4	6.96	0	318.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021993	Mipep	ENSMUST00000224635	ENSMUSP00000153502	TRANSLATION	nonsense_mediated_decay	-	-	-	711	5	9.5	1.5	476.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021962	Dcp1a	ENSMUST00000224453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225286	ENSMUSP00000153074	TRANSLATION	nonsense_mediated_decay	start	-	-	177	0	3.45	0	144.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021962	Dcp1a	ENSMUST00000225518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021962	Dcp1a	ENSMUST00000224810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000223658	ENSMUSP00000153370	TRANSLATION	protein_coding	start/stop	-	-	419	0	3.45	0	144.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021962	Dcp1a	ENSMUST00000224692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000223568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000022535	ENSMUSP00000022535	TRANSLATION	protein_coding	-	CCDS36848.1	1	602	0	4.8	1.5	209.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000021962	Dcp1a	ENSMUST00000225407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225196	ENSMUSP00000152897	TRANSLATION	nonsense_mediated_decay	-	-	-	602	0	4.8	1.5	209.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021962	Dcp1a	ENSMUST00000223754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021962	Dcp1a	ENSMUST00000225934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021815	Mss51	ENSMUST00000022353	ENSMUSP00000022353	TRANSLATION	protein_coding	-	CCDS49414.1	1	446	8	0.84	0.5	37.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021814	Anxa7	ENSMUST00000224344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000223960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000224410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000225132	ENSMUSP00000153130	TRANSLATION	protein_coding	stop	-	-	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021814	Anxa7	ENSMUST00000226001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000225118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000223681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021814	Anxa7	ENSMUST00000100844	ENSMUSP00000098405	TRANSLATION	protein_coding	-	-	1	485	25	7.915	1.7	328.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021814	Anxa7	ENSMUST00000225941	ENSMUSP00000153174	TRANSLATION	protein_coding	start	-	-	72	4	2	0	62.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021814	Anxa7	ENSMUST00000065504	ENSMUSP00000066035	TRANSLATION	protein_coding	-	CCDS26845.1	1	463	25	7.6	1.7	328.1	0	-4,-5	-	-	17.37	PRINCIPAL:2
ENSMUSG00000021814	Anxa7	ENSMUST00000224975	ENSMUSP00000153669	TRANSLATION	protein_coding	-	CCDS26845.1	-	463	25	7.6	1.7	328.1	0	-4,-5	-	-	17.37	PRINCIPAL:2
ENSMUSG00000063060	Sox7	ENSMUST00000079652	ENSMUSP00000078597	TRANSLATION	protein_coding	-	CCDS27206.1	1	380	0	1.2	1.5	154.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033405	Nudt15	ENSMUST00000226903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033405	Nudt15	ENSMUST00000043813	ENSMUSP00000039537	TRANSLATION	protein_coding	-	CCDS27270.1	1	170	4	3	2.7	67.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000091725	Gm8220	ENSMUST00000177877	ENSMUSP00000136414	TRANSLATION	protein_coding	start/stop	-	5	127	0	0	0	35.9	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000091725	Gm8220	ENSMUST00000164663	ENSMUSP00000131482	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000091725	Gm8220	ENSMUST00000169601	ENSMUSP00000129002	TRANSLATION	protein_coding	start/stop	-	5	175	0	0	0	90	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021945	Zmym2	ENSMUST00000022511	ENSMUSP00000022511	TRANSLATION	protein_coding	-	CCDS49506.1	1	1376	15	1	4.1	465.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021945	Zmym2	ENSMUST00000225282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021945	Zmym2	ENSMUST00000223965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021945	Zmym2	ENSMUST00000223669	ENSMUSP00000152925	TRANSLATION	protein_coding	-	-	-	290	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021945	Zmym2	ENSMUST00000225393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021945	Zmym2	ENSMUST00000224922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021945	Zmym2	ENSMUST00000226025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036282	Naa30	ENSMUST00000153488	ENSMUSP00000121679	TRANSLATION	protein_coding	-	CCDS84137.1	1	364	23	3.03	0.5	61	0	-4,-5	-	-	17.886	PRINCIPAL:2
ENSMUSG00000036282	Naa30	ENSMUST00000136995	ENSMUSP00000119775	TRANSLATION	protein_coding	start	-	3	34	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036282	Naa30	ENSMUST00000138478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036282	Naa30	ENSMUST00000134984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036282	Naa30	ENSMUST00000037362	ENSMUSP00000041450	TRANSLATION	protein_coding	-	-	5	366	23	2.8188	0	62.2	0	-4,-5	-	-	17.58	ALTERNATIVE:2
ENSMUSG00000040380	Cbln3	ENSMUST00000172378	ENSMUSP00000127798	TRANSLATION	protein_coding	-	CCDS27133.1	1	197	0	2.64	1.5	89.4	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040380	Cbln3	ENSMUST00000063871	ENSMUSP00000070494	TRANSLATION	protein_coding	-	CCDS27133.1	1	197	0	2.64	1.5	89.4	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000019297	Nop9	ENSMUST00000227300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019297	Nop9	ENSMUST00000019441	ENSMUSP00000019441	TRANSLATION	protein_coding	-	CCDS27126.1	1	636	0	2.9	2.9	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022041	Chrna2	ENSMUST00000206455	ENSMUSP00000145896	TRANSLATION	protein_coding	-	CCDS27219.1	5	512	0	4.86	1.5	585.2	4	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022041	Chrna2	ENSMUST00000022620	ENSMUSP00000022620	TRANSLATION	protein_coding	-	CCDS27219.1	1	512	0	4.86	1.5	585.2	4	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000068506	Gm5800	ENSMUST00000095916	ENSMUSP00000093605	TRANSLATION	protein_coding	-	CCDS27042.1	1	186	0	0	0.5	91.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045691	Thtpa	ENSMUST00000050575	ENSMUSP00000056026	TRANSLATION	protein_coding	-	CCDS27108.1	1	224	0	2	1.5	143.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041625	Ggact	ENSMUST00000161322	ENSMUSP00000135481	TRANSLATION	protein_coding	-	-	2	68	6	1	0	35.3	0	-4,-2	-	-	8.49	MINOR
ENSMUSG00000041625	Ggact	ENSMUST00000110679	ENSMUSP00000135487	TRANSLATION	protein_coding	-	-	1	79	6	1	0	38.8	0	-4,-2	-	-	8.736	MINOR
ENSMUSG00000041625	Ggact	ENSMUST00000162164	ENSMUSP00000123721	TRANSLATION	protein_coding	stop	-	2	105	8	2	0	80.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041625	Ggact	ENSMUST00000038075	ENSMUSP00000037278	TRANSLATION	protein_coding	-	CCDS27351.1	1	149	8	3.25	0.5	85.1	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000041625	Ggact	ENSMUST00000227890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041625	Ggact	ENSMUST00000160401	ENSMUSP00000124954	TRANSLATION	protein_coding	stop	-	3	121	8	2.5	0	84.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021831	Ero1l	ENSMUST00000228777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021831	Ero1l	ENSMUST00000227147	ENSMUSP00000153844	TRANSLATION	protein_coding	start/stop	-	-	229	11	5.16	0	234.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021831	Ero1l	ENSMUST00000228564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021831	Ero1l	ENSMUST00000228836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021831	Ero1l	ENSMUST00000227315	ENSMUSP00000154411	TRANSLATION	nonsense_mediated_decay	start	-	-	64	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021831	Ero1l	ENSMUST00000022378	ENSMUSP00000022378	TRANSLATION	protein_coding	-	CCDS36893.1	1	464	19	11.39	6.3	417.7	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000022051	Bnip3l	ENSMUST00000022634	ENSMUSP00000022634	TRANSLATION	protein_coding	-	CCDS27227.1	1	218	0	1.5	6.3	283.5	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022051	Bnip3l	ENSMUST00000129605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022051	Bnip3l	ENSMUST00000135703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022051	Bnip3l	ENSMUST00000151059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022051	Bnip3l	ENSMUST00000138160	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022051	Bnip3l	ENSMUST00000142593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022051	Bnip3l	ENSMUST00000111115	ENSMUSP00000106744	TRANSLATION	protein_coding	-	-	1	204	0	1	1	257.6	1	-4,-5	-	-	8.448	MINOR
ENSMUSG00000000957	Mmp14	ENSMUST00000089688	ENSMUSP00000087119	TRANSLATION	protein_coding	-	CCDS36922.1	1	582	20	9.17	3.9	519.8	0	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000000957	Mmp14	ENSMUST00000196155	ENSMUSP00000143012	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000957	Mmp14	ENSMUST00000198679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000957	Mmp14	ENSMUST00000225641	ENSMUSP00000153679	TRANSLATION	protein_coding	-	-	-	558	20	8.37	0	390.4	0	1,-2	-	-	10.398	MINOR
ENSMUSG00000000957	Mmp14	ENSMUST00000197874	ENSMUSP00000142665	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	0.14	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000000957	Mmp14	ENSMUST00000197947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000957	Mmp14	ENSMUST00000226710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044519	Zfp488	ENSMUST00000166737	ENSMUSP00000132436	TRANSLATION	protein_coding	-	CCDS26930.2	1	337	7	0	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021975	Ints9	ENSMUST00000043914	ENSMUSP00000045552	TRANSLATION	protein_coding	-	-	1	658	0	5.36	14.3	28.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021975	Ints9	ENSMUST00000239450	ENSMUSP00000159373	TRANSLATION	protein_coding	-	CCDS27210.1	-	687	0	5.36	0.5	28.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000021975	Ints9	ENSMUST00000225790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021975	Ints9	ENSMUST00000224593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058351	Smim4	ENSMUST00000049732	ENSMUSP00000050634	TRANSLATION	protein_coding	-	CCDS84105.1	2	80	0	0	3.9	117	2	-4,0	-	-	7	ALTERNATIVE:2
ENSMUSG00000058351	Smim4	ENSMUST00000090205	ENSMUSP00000087673	TRANSLATION	protein_coding	-	-	2	60	0	0	0	89	2	-4,0	-	-	4.32	MINOR
ENSMUSG00000058351	Smim4	ENSMUST00000064032	ENSMUSP00000067418	TRANSLATION	protein_coding	-	CCDS84106.1	3	86	0	0	0.5	117	2	-4,0	-	-	6	PRINCIPAL:4
ENSMUSG00000058351	Smim4	ENSMUST00000203261	ENSMUSP00000145018	TRANSLATION	protein_coding	-	CCDS84104.1	1	102	0	0	0.5	85.4	2	-4,0	-	-	4.104	MINOR
ENSMUSG00000032925	Itgbl1	ENSMUST00000142161	ENSMUSP00000121659	TRANSLATION	nonsense_mediated_decay	-	-	1	210	0	2.9	0	23.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000032925	Itgbl1	ENSMUST00000049681	ENSMUSP00000059019	TRANSLATION	protein_coding	-	CCDS27354.1	1	494	0	7.38	7.6	111	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000032925	Itgbl1	ENSMUST00000132026	ENSMUSP00000115455	TRANSLATION	protein_coding	start	-	1	370	0	6.08	0	84.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022159	Rab2b	ENSMUST00000167116	ENSMUSP00000131145	TRANSLATION	protein_coding	-	CCDS27052.1	1	216	23	6.01	6.3	206.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022159	Rab2b	ENSMUST00000173046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022159	Rab2b	ENSMUST00000172634	ENSMUSP00000134315	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022159	Rab2b	ENSMUST00000172488	ENSMUSP00000133787	TRANSLATION	nonsense_mediated_decay	-	-	5	62	12	2.08	0	67.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022159	Rab2b	ENSMUST00000022765	ENSMUSP00000022765	TRANSLATION	protein_coding	-	CCDS27052.1	1	216	23	6.01	6.3	206.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022159	Rab2b	ENSMUST00000100631	ENSMUSP00000098197	TRANSLATION	protein_coding	-	-	1	193	23	5.26	1.2	200.5	0	-4,-6	-	-	16.228	MINOR
ENSMUSG00000022159	Rab2b	ENSMUST00000174020	ENSMUSP00000134726	TRANSLATION	nonsense_mediated_decay	-	-	5	71	12	2.146	0	67.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022159	Rab2b	ENSMUST00000174585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071613	Gm10340	ENSMUST00000170790	ENSMUSP00000130159	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	74.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071613	Gm10340	ENSMUST00000188235	ENSMUSP00000140601	TRANSLATION	protein_coding	stop	-	5	205	0	0	0.5	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095463	Entpd4	ENSMUST00000183648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095463	Entpd4	ENSMUST00000064831	ENSMUSP00000065046	TRANSLATION	protein_coding	-	CCDS27240.1	5	613	7	3.86	6.3	358.5	2	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000095463	Entpd4	ENSMUST00000184165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095463	Entpd4	ENSMUST00000184973	ENSMUSP00000138944	TRANSLATION	protein_coding	-	CCDS27240.1	1	613	7	3.86	6.3	358.5	2	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000095463	Entpd4	ENSMUST00000184314	ENSMUSP00000138892	TRANSLATION	protein_coding	-	-	1	102	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000095463	Entpd4	ENSMUST00000184234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041408	Wapl	ENSMUST00000169910	ENSMUSP00000130547	TRANSLATION	protein_coding	-	CCDS36880.1	1	1200	0	13.86	2.7	396.4	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000041408	Wapl	ENSMUST00000048263	ENSMUSP00000040232	TRANSLATION	protein_coding	-	CCDS36880.1	1	1200	0	13.86	2.7	396.4	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000041408	Wapl	ENSMUST00000090027	ENSMUSP00000087481	TRANSLATION	protein_coding	-	CCDS79296.1	5	1194	0	13.86	2.7	396.4	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000041408	Wapl	ENSMUST00000172658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041408	Wapl	ENSMUST00000174559	ENSMUSP00000133779	TRANSLATION	protein_coding	start/stop	-	5	160	0	3.75	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041408	Wapl	ENSMUST00000111895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041408	Wapl	ENSMUST00000151285	ENSMUSP00000117282	TRANSLATION	protein_coding	start	-	5	430	0	10.46	0	257.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025279	Dnase1l3	ENSMUST00000026315	ENSMUSP00000026315	TRANSLATION	protein_coding	-	CCDS26807.1	1	310	8	6.5	0.5	48.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000025279	Dnase1l3	ENSMUST00000145234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034731	Dgkh	ENSMUST00000227537	ENSMUSP00000154107	TRANSLATION	nonsense_mediated_decay	-	-	-	443	17	3.714	0	168.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000034731	Dgkh	ENSMUST00000228362	ENSMUSP00000154554	TRANSLATION	protein_coding	-	-	-	1078	16	5.464	1.5	407.7	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000034731	Dgkh	ENSMUST00000226342	ENSMUSP00000154036	TRANSLATION	protein_coding	-	-	-	1180	22	5.134	1.5	395.2	0	-4,-5	-	-	16.59	ALTERNATIVE:2
ENSMUSG00000034731	Dgkh	ENSMUST00000227767	ENSMUSP00000154031	TRANSLATION	protein_coding	-	-	-	1032	16	3.45	0.5	343.5	0	-4,-5	-	-	6.12	MINOR
ENSMUSG00000034731	Dgkh	ENSMUST00000227820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034731	Dgkh	ENSMUST00000074729	ENSMUSP00000074290	TRANSLATION	protein_coding	-	CCDS36986.1	5	1156	22	5.134	1.5	395.2	0	-2,-5	-	-	16.59	PRINCIPAL:2
ENSMUSG00000090634	Gm8126	ENSMUST00000169587	ENSMUSP00000132242	TRANSLATION	protein_coding	-	-	2	198	0	0	0.5	80.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094817	Cphx3	ENSMUST00000184577	ENSMUSP00000139300	TRANSLATION	protein_coding	-	CCDS79281.1	1	182	0	1.2	0.5	49.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094817	Cphx3	ENSMUST00000163305	ENSMUSP00000129288	TRANSLATION	protein_coding	-	-	1	182	0	1.2	0.5	49.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094817	Cphx3	ENSMUST00000184670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014813	Stc1	ENSMUST00000014957	ENSMUSP00000014957	TRANSLATION	protein_coding	-	CCDS27236.1	1	247	0	0	7.5	337.4	0	2,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000097148	Gm3839	ENSMUST00000181173	ENSMUSP00000138396	TRANSLATION	protein_coding	-	-	5	333	22	1	21.5	364.6	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000034190	Chmp7	ENSMUST00000225036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034190	Chmp7	ENSMUST00000036381	ENSMUSP00000047700	TRANSLATION	protein_coding	-	CCDS27242.1	1	451	0	1.89	5.1	79	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034190	Chmp7	ENSMUST00000224964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034190	Chmp7	ENSMUST00000224601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000226338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000226427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022223	Sdr39u1	ENSMUST00000228151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227387	ENSMUSP00000154325	TRANSLATION	protein_coding	start/stop	-	-	139	21	4.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022223	Sdr39u1	ENSMUST00000226273	ENSMUSP00000154028	TRANSLATION	nonsense_mediated_decay	-	-	-	64	11	1.58	0	22.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227211	ENSMUSP00000153845	TRANSLATION	protein_coding	start	-	-	137	19	4.212	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000228209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227032	ENSMUSP00000154624	TRANSLATION	nonsense_mediated_decay	-	-	-	147	23	3.83	0	22.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000111325	ENSMUSP00000106957	TRANSLATION	protein_coding	-	CCDS36935.1	1	293	29	7.16	3.9	86.5	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000022223	Sdr39u1	ENSMUST00000227268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022223	Sdr39u1	ENSMUST00000226746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022040	Ephx2	ENSMUST00000070515	ENSMUSP00000069209	TRANSLATION	protein_coding	-	CCDS27218.1	1	554	10	14.91	1.5	153.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022040	Ephx2	ENSMUST00000224698	ENSMUSP00000153161	TRANSLATION	protein_coding	-	-	-	536	7	13.36	0.5	125.7	0	0,-3	-	-	11.208	MINOR
ENSMUSG00000022040	Ephx2	ENSMUST00000225309	ENSMUSP00000152894	TRANSLATION	protein_coding	-	-	-	488	7	13.16	1.5	125.7	0	-4,-6	-	-	10.812	MINOR
ENSMUSG00000021791	Dydc2	ENSMUST00000022316	ENSMUSP00000022316	TRANSLATION	protein_coding	-	CCDS26958.1	1	139	0	0	1.5	66.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068431	Olfr742	ENSMUST00000217437	ENSMUSP00000150814	TRANSLATION	protein_coding	-	CCDS27018.1	5	311	0	0.42	1.5	184.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000068431	Olfr742	ENSMUST00000089836	ENSMUSP00000087273	TRANSLATION	protein_coding	-	CCDS27018.1	-	311	0	0.42	1.5	184.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000068431	Olfr742	ENSMUST00000213935	ENSMUSP00000148928	TRANSLATION	protein_coding	-	CCDS27018.1	5	311	0	0.42	1.5	184.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039081	Zfp503	ENSMUST00000043409	ENSMUSP00000046641	TRANSLATION	protein_coding	-	CCDS36822.1	1	652	4	0	0.5	99.1	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000091275	Gm3248	ENSMUST00000163885	ENSMUSP00000131346	TRANSLATION	protein_coding	-	-	5	186	0	0	0	74.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063277	Gm10128	ENSMUST00000171360	ENSMUSP00000129516	TRANSLATION	protein_coding	stop	-	5	205	0	0	0.5	74.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021994	Wnt5a	ENSMUST00000112272	ENSMUSP00000107891	TRANSLATION	protein_coding	-	CCDS56946.1	1	360	0	1.7	4.1	405.4	0	2,-2	-	-	13.41	MINOR
ENSMUSG00000021994	Wnt5a	ENSMUST00000063465	ENSMUSP00000064878	TRANSLATION	protein_coding	-	CCDS26888.1	1	380	0	1.7	7.6	405.4	0	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021994	Wnt5a	ENSMUST00000146192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021994	Wnt5a	ENSMUST00000134163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021994	Wnt5a	ENSMUST00000151929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021994	Wnt5a	ENSMUST00000134766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094811	Gm21103	ENSMUST00000179042	ENSMUSP00000137550	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	72.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094811	Gm21103	ENSMUST00000170923	ENSMUSP00000131334	TRANSLATION	protein_coding	-	-	5	267	0	0	0	72.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000094811	Gm21103	ENSMUST00000112737	ENSMUSP00000108357	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	72.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000109835	Olfr730	ENSMUST00000215779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109835	Olfr730	ENSMUST00000205837	ENSMUSP00000145742	TRANSLATION	protein_coding	-	-	-	317	0	0.3	7.5	147.9	5	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000109835	Olfr730	ENSMUST00000051453	ENSMUSP00000060325	TRANSLATION	protein_coding	-	CCDS27006.1	-	318	0	0.3	7.5	147.9	5	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000094784	Gm8122	ENSMUST00000165988	ENSMUSP00000131304	TRANSLATION	protein_coding	start	-	5	213	0	0	0	90	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000091110	Gm2832	ENSMUST00000172412	ENSMUSP00000131087	TRANSLATION	protein_coding	start	-	5	200	0	0	0	79	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000048281	Dleu7	ENSMUST00000063169	ENSMUSP00000060855	TRANSLATION	protein_coding	-	CCDS27188.1	1	209	0	0	1.5	325.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000048281	Dleu7	ENSMUST00000225120	ENSMUSP00000153153	TRANSLATION	nonsense_mediated_decay	-	-	-	167	0	0	0	188.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021785	Ngly1	ENSMUST00000223879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021785	Ngly1	ENSMUST00000022310	ENSMUSP00000022310	TRANSLATION	protein_coding	-	CCDS26832.1	1	651	12	13.05	0.5	387.8	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000021785	Ngly1	ENSMUST00000226089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021785	Ngly1	ENSMUST00000224154	ENSMUSP00000153445	TRANSLATION	protein_coding	stop	-	-	111	0	2.75	0	79.8	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000021785	Ngly1	ENSMUST00000224656	ENSMUSP00000152998	TRANSLATION	protein_coding	-	-	-	596	12	12.05	0	355.9	0	-2,-4	-	-	14.088	MINOR
ENSMUSG00000021785	Ngly1	ENSMUST00000223973	ENSMUSP00000153025	TRANSLATION	protein_coding	start/stop	-	-	251	4	4.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021785	Ngly1	ENSMUST00000153109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021785	Ngly1	ENSMUST00000143947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058188	Olfr746	ENSMUST00000218546	ENSMUSP00000151399	TRANSLATION	protein_coding	-	CCDS27021.1	5	314	0	0.24	6.3	173.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058188	Olfr746	ENSMUST00000080616	ENSMUSP00000079451	TRANSLATION	protein_coding	-	CCDS27021.1	-	314	0	0.24	6.3	173.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000071489	Ptgdr	ENSMUST00000095959	ENSMUSP00000093653	TRANSLATION	protein_coding	-	CCDS26971.1	1	357	0	0	1.5	63.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034450	Gulo	ENSMUST00000059970	ENSMUSP00000060912	TRANSLATION	protein_coding	-	CCDS36958.1	1	440	37	4	10.4	414.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000105216	Traj47	ENSMUST00000197949	ENSMUSP00000142372	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040314	Ctsg	ENSMUST00000225312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040314	Ctsg	ENSMUST00000015583	ENSMUSP00000015583	TRANSLATION	protein_coding	-	CCDS27142.1	1	261	6	4.3	0.5	221.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000017491	Rarb	ENSMUST00000063750	ENSMUSP00000067694	TRANSLATION	protein_coding	-	CCDS26834.1	1	448	31	8.18	10.3	199.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000017491	Rarb	ENSMUST00000225245	ENSMUSP00000153454	TRANSLATION	protein_coding	stop	-	-	74	0	0.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000017491	Rarb	ENSMUST00000225921	ENSMUSP00000152980	TRANSLATION	protein_coding	-	-	-	402	24	7.18	1.2	155.2	0	-4,-6	-	-	8.76	MINOR
ENSMUSG00000017491	Rarb	ENSMUST00000223576	ENSMUSP00000153098	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000017491	Rarb	ENSMUST00000223976	ENSMUSP00000153519	TRANSLATION	protein_coding	stop	-	-	139	4	1.1	0	42	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000017491	Rarb	ENSMUST00000225356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017491	Rarb	ENSMUST00000225594	ENSMUSP00000153178	TRANSLATION	nonsense_mediated_decay	-	-	-	164	8	2.43	0	114.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022102	Dok2	ENSMUST00000165654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022102	Dok2	ENSMUST00000169599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022102	Dok2	ENSMUST00000171481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022102	Dok2	ENSMUST00000164691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022102	Dok2	ENSMUST00000171864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022102	Dok2	ENSMUST00000169106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022102	Dok2	ENSMUST00000168355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022102	Dok2	ENSMUST00000022698	ENSMUSP00000022698	TRANSLATION	protein_coding	-	CCDS27262.1	1	412	0	3.15	1.5	133.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000097853	Gm3532	ENSMUST00000181880	ENSMUSP00000137893	TRANSLATION	protein_coding	start	-	5	194	0	0	0	71.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000096096	Trav4-4-dv10	ENSMUST00000103663	ENSMUSP00000100440	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	45.4	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076913	Traj16	ENSMUST00000103725	ENSMUSP00000142804	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021835	Bmp4	ENSMUST00000226759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021835	Bmp4	ENSMUST00000135408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021835	Bmp4	ENSMUST00000100676	ENSMUSP00000098242	TRANSLATION	protein_coding	-	CCDS36897.1	1	408	0	1.04	7.5	296.7	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021835	Bmp4	ENSMUST00000074077	ENSMUSP00000073720	TRANSLATION	protein_coding	-	CCDS36897.1	1	408	0	1.04	7.5	296.7	0	3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000022219	Cideb	ENSMUST00000001497	ENSMUSP00000001497	TRANSLATION	protein_coding	-	CCDS27127.1	1	219	0	2.5	5.3	96.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000022219	Cideb	ENSMUST00000136270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035161	Ints6	ENSMUST00000223585	ENSMUSP00000152954	TRANSLATION	protein_coding	-	CCDS27191.1	-	883	3	0	6.3	172.2	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000035161	Ints6	ENSMUST00000224891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035161	Ints6	ENSMUST00000225193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035161	Ints6	ENSMUST00000053959	ENSMUSP00000086788	TRANSLATION	protein_coding	-	CCDS27191.1	1	883	3	0	6.3	172.2	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000035161	Ints6	ENSMUST00000225406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035161	Ints6	ENSMUST00000225250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035161	Ints6	ENSMUST00000225700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021768	Dusp13	ENSMUST00000127851	ENSMUSP00000120977	TRANSLATION	nonsense_mediated_decay	-	-	5	266	1	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000153071	ENSMUSP00000139140	TRANSLATION	protein_coding	start	-	3	55	0	1	0	45.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000120984	ENSMUSP00000113985	TRANSLATION	protein_coding	-	-	1	198	9	3.33	6.3	86.1	0	-4,-7	-	-	17.456	PRINCIPAL:3
ENSMUSG00000021768	Dusp13	ENSMUST00000119866	ENSMUSP00000112552	TRANSLATION	protein_coding	-	-	5	316	9	3.33	1	86.1	0	-4,-2	-	-	15.456	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000127051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021768	Dusp13	ENSMUST00000183824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021768	Dusp13	ENSMUST00000183893	ENSMUSP00000139061	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000120956	ENSMUSP00000113305	TRANSLATION	protein_coding	-	CCDS26864.1	1	263	9	3.33	0.5	86.1	0	-4,-1	-	-	15.456	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000184703	ENSMUSP00000138972	TRANSLATION	protein_coding	-	-	5	198	9	3.33	6.3	86.1	0	-4,-7	-	-	17.456	ALTERNATIVE:1
ENSMUSG00000021768	Dusp13	ENSMUST00000075040	ENSMUSP00000074553	TRANSLATION	protein_coding	-	CCDS36821.1	1	188	8	3.13	2.7	101.8	0	-4,-5	-	-	15.978	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000184571	ENSMUSP00000139338	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000183698	ENSMUSP00000139058	TRANSLATION	protein_coding	-	-	5	221	9	3.33	0.5	86.1	0	-4,-5	-	-	15.456	MINOR
ENSMUSG00000021768	Dusp13	ENSMUST00000183943	ENSMUSP00000139154	TRANSLATION	protein_coding	-	-	5	248	9	4.13	1.2	86.1	0	-4,-5	-	-	17.134	ALTERNATIVE:2
ENSMUSG00000021768	Dusp13	ENSMUST00000185042	ENSMUSP00000139083	TRANSLATION	nonsense_mediated_decay	-	-	5	50	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076840	Trav14-1	ENSMUST00000198297	ENSMUSP00000143077	TRANSLATION	TR_V_gene	stop	-	-	121	0	1	0	58.7	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022110	Sucla2	ENSMUST00000162691	ENSMUSP00000123898	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022110	Sucla2	ENSMUST00000160507	ENSMUSP00000123765	TRANSLATION	protein_coding	-	CCDS27271.1	1	463	22	8.85	6.3	348.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000022110	Sucla2	ENSMUST00000161082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022110	Sucla2	ENSMUST00000022706	ENSMUSP00000022706	TRANSLATION	protein_coding	-	CCDS27271.1	1	463	22	8.85	6.3	348.9	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000022110	Sucla2	ENSMUST00000161829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022110	Sucla2	ENSMUST00000159165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022110	Sucla2	ENSMUST00000162723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021807	Rtraf	ENSMUST00000225615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021807	Rtraf	ENSMUST00000022341	ENSMUSP00000022341	TRANSLATION	protein_coding	-	CCDS26839.1	1	244	0	0	12.8	306.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000021902	Phf7	ENSMUST00000226310	ENSMUSP00000154614	TRANSLATION	nonsense_mediated_decay	-	-	-	226	0	1.02	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021902	Phf7	ENSMUST00000228437	ENSMUSP00000154738	TRANSLATION	protein_coding	-	-	-	212	10	3.02	0	0	0	-4,-6	-	-	4.8	MINOR
ENSMUSG00000021902	Phf7	ENSMUST00000228140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021902	Phf7	ENSMUST00000227668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021902	Phf7	ENSMUST00000022459	ENSMUSP00000022459	TRANSLATION	protein_coding	-	CCDS26909.1	1	307	25	3.62	0.5	64.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021902	Phf7	ENSMUST00000228930	ENSMUSP00000154281	TRANSLATION	nonsense_mediated_decay	-	-	-	164	7	1.62	0.5	58.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021902	Phf7	ENSMUST00000226565	ENSMUSP00000154095	TRANSLATION	protein_coding	-	-	-	268	23	2.62	0.5	64.4	0	-4,-6	-	-	14.67	MINOR
ENSMUSG00000022003	Slc25a30	ENSMUST00000228528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022003	Slc25a30	ENSMUST00000227894	ENSMUSP00000153810	TRANSLATION	protein_coding	stop	-	-	90	0	2.13	0	67	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022003	Slc25a30	ENSMUST00000022580	ENSMUSP00000022580	TRANSLATION	protein_coding	-	CCDS27281.1	1	291	18	6.43	13.6	223.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000022003	Slc25a30	ENSMUST00000228379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022003	Slc25a30	ENSMUST00000227621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022003	Slc25a30	ENSMUST00000226574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000173896	ENSMUSP00000133506	TRANSLATION	nonsense_mediated_decay	-	-	5	153	0	3.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000174351	ENSMUSP00000134732	TRANSLATION	nonsense_mediated_decay	start	-	5	335	4	6.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000145875	ENSMUSP00000133573	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000156611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000127797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000197394	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000174853	ENSMUSP00000133864	TRANSLATION	protein_coding	stop	-	3	245	0	5.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000147768	ENSMUSP00000134577	TRANSLATION	nonsense_mediated_decay	-	-	1	245	0	5.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000130550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000173546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022160	Mettl3	ENSMUST00000022767	ENSMUSP00000022767	TRANSLATION	protein_coding	-	CCDS27053.1	1	580	7	13.83	8.8	203.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022160	Mettl3	ENSMUST00000174360	ENSMUSP00000134578	TRANSLATION	protein_coding	start	-	3	104	0	3.25	0	77.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000122962	ENSMUSP00000133999	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000173656	ENSMUSP00000133759	TRANSLATION	protein_coding	start	-	3	73	0	1.75	0	51.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022160	Mettl3	ENSMUST00000173138	ENSMUSP00000134018	TRANSLATION	nonsense_mediated_decay	-	-	5	153	0	3.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040432	Ltb4r2	ENSMUST00000228302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040432	Ltb4r2	ENSMUST00000044554	ENSMUSP00000048358	TRANSLATION	protein_coding	-	CCDS27128.1	1	360	0	0.48	1.5	104.1	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000075592	Nynrin	ENSMUST00000168479	ENSMUSP00000129557	TRANSLATION	protein_coding	-	CCDS49501.1	5	1840	4	3.5	0.5	175.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000075592	Nynrin	ENSMUST00000227465	ENSMUSP00000154673	TRANSLATION	protein_coding	stop	-	-	128	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000075592	Nynrin	ENSMUST00000100529	ENSMUSP00000098098	TRANSLATION	protein_coding	-	CCDS49501.1	1	1840	4	3.5	0.5	175.3	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000021890	Eaf1	ENSMUST00000227551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021890	Eaf1	ENSMUST00000226564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021890	Eaf1	ENSMUST00000022446	ENSMUSP00000022446	TRANSLATION	protein_coding	-	CCDS26914.1	1	268	0	0	2.9	82	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021890	Eaf1	ENSMUST00000228952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034522	Zfp395	ENSMUST00000224687	ENSMUSP00000153406	TRANSLATION	protein_coding	stop	-	-	93	0	0	0	73.8	0	-1,2	-	-	-1	MINOR
ENSMUSG00000034522	Zfp395	ENSMUST00000224623	ENSMUSP00000153350	TRANSLATION	protein_coding	stop	-	-	101	0	0	0	88.8	0	-1,2	-	-	-1	MINOR
ENSMUSG00000034522	Zfp395	ENSMUST00000066994	ENSMUSP00000064422	TRANSLATION	protein_coding	-	CCDS49522.1	1	508	4	0	1.5	98.9	0	-1,2	-	-	10	PRINCIPAL:1
ENSMUSG00000034522	Zfp395	ENSMUST00000225865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034522	Zfp395	ENSMUST00000225512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096901	Gm3029	ENSMUST00000179327	ENSMUSP00000136511	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000096901	Gm3029	ENSMUST00000168306	ENSMUSP00000128438	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000022105	Rb1	ENSMUST00000169002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022105	Rb1	ENSMUST00000164624	ENSMUSP00000125967	TRANSLATION	nonsense_mediated_decay	-	-	5	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022105	Rb1	ENSMUST00000022701	ENSMUSP00000022701	TRANSLATION	protein_coding	-	CCDS27267.1	1	921	0	20.34	1.5	681.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022105	Rb1	ENSMUST00000168495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022105	Rb1	ENSMUST00000163932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022105	Rb1	ENSMUST00000170967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068399	Gm7247	ENSMUST00000162998	ENSMUSP00000125409	TRANSLATION	protein_coding	-	-	5	187	0	0	0	79.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021916	Glt8d1	ENSMUST00000226959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000168584	ENSMUSP00000129323	TRANSLATION	protein_coding	-	CCDS26904.1	1	371	3	0	6.3	226.2	0	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000021916	Glt8d1	ENSMUST00000226271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000226378	ENSMUSP00000154591	TRANSLATION	protein_coding	stop	-	-	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021916	Glt8d1	ENSMUST00000226348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000227783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000228914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000228718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021916	Glt8d1	ENSMUST00000022476	ENSMUSP00000022476	TRANSLATION	protein_coding	-	CCDS26904.1	1	371	3	0	6.3	226.2	0	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000021916	Glt8d1	ENSMUST00000228255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096678	Trav9-4	ENSMUST00000103662	ENSMUSP00000100439	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	56.5	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000079409	Gm5795	ENSMUST00000100920	ENSMUSP00000098480	TRANSLATION	protein_coding	-	CCDS56912.1	5	204	0	0	0.5	76.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000079409	Gm5795	ENSMUST00000166275	ENSMUSP00000129350	TRANSLATION	protein_coding	stop	-	5	204	0	0	0.5	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079409	Gm5795	ENSMUST00000171150	ENSMUSP00000133257	TRANSLATION	protein_coding	-	-	5	263	0	0	0	76.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000004558	Ndrg2	ENSMUST00000228620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004558	Ndrg2	ENSMUST00000227402	ENSMUSP00000154279	TRANSLATION	protein_coding	stop	-	-	238	0	6.16	0	287.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004558	Ndrg2	ENSMUST00000226528	ENSMUSP00000154716	TRANSLATION	protein_coding	stop	-	-	114	0	2.5	0	129.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004558	Ndrg2	ENSMUST00000226698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004558	Ndrg2	ENSMUST00000227237	ENSMUSP00000153938	TRANSLATION	protein_coding	stop	-	-	273	0	7.66	0	354.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004558	Ndrg2	ENSMUST00000004673	ENSMUSP00000004673	TRANSLATION	protein_coding	-	CCDS27047.1	1	371	0	8.66	7.5	407.5	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000004558	Ndrg2	ENSMUST00000228173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004558	Ndrg2	ENSMUST00000226364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004558	Ndrg2	ENSMUST00000226122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004558	Ndrg2	ENSMUST00000226184	ENSMUSP00000154135	TRANSLATION	protein_coding	stop	-	-	114	0	2	0	103.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004558	Ndrg2	ENSMUST00000228164	ENSMUSP00000153830	TRANSLATION	protein_coding	stop	-	-	176	0	4.33	0	234.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004558	Ndrg2	ENSMUST00000111632	ENSMUSP00000107259	TRANSLATION	protein_coding	-	CCDS49486.1	1	357	0	8.66	7.5	407.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000004558	Ndrg2	ENSMUST00000226366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095295	Gm3488	ENSMUST00000178220	ENSMUSP00000137493	TRANSLATION	protein_coding	-	-	1	172	0	0	0.5	68.1	0	-4,-5	-	-	5.52	PRINCIPAL:3
ENSMUSG00000095295	Gm3488	ENSMUST00000181562	ENSMUSP00000137698	TRANSLATION	protein_coding	-	-	5	238	0	0	0	74	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000096629	Gm3383	ENSMUST00000178414	ENSMUSP00000136657	TRANSLATION	protein_coding	-	-	5	259	0	0	0.5	75.5	0	-4,-2	-	-	5.34	PRINCIPAL:5
ENSMUSG00000096629	Gm3383	ENSMUST00000096171	ENSMUSP00000093885	TRANSLATION	protein_coding	-	-	5	207	0	0	0.5	84.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000096629	Gm3383	ENSMUST00000112758	ENSMUSP00000108378	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	75.5	0	-4,-5	-	-	5.34	ALTERNATIVE:2
ENSMUSG00000037759	Ptger2	ENSMUST00000227198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037759	Ptger2	ENSMUST00000046891	ENSMUSP00000038483	TRANSLATION	protein_coding	-	CCDS26972.1	1	362	0	0.48	4.1	87.9	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000072294	Klf12	ENSMUST00000226205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072294	Klf12	ENSMUST00000228216	ENSMUSP00000153901	TRANSLATION	protein_coding	-	CCDS36998.1	-	402	12	2	7.5	68.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000072294	Klf12	ENSMUST00000097079	ENSMUSP00000094844	TRANSLATION	protein_coding	-	CCDS36998.1	1	402	12	2	7.5	68.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000072294	Klf12	ENSMUST00000226774	ENSMUSP00000153987	TRANSLATION	protein_coding	stop	-	-	153	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072294	Klf12	ENSMUST00000228612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072294	Klf12	ENSMUST00000226544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022043	Trim35	ENSMUST00000022623	ENSMUSP00000022623	TRANSLATION	protein_coding	-	CCDS27221.2	1	516	12	2.44	0.5	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022043	Trim35	ENSMUST00000223737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022043	Trim35	ENSMUST00000121006	ENSMUSP00000112877	TRANSLATION	protein_coding	start	-	1	358	12	1.88	0	99.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045211	Nudt18	ENSMUST00000228554	ENSMUSP00000154027	TRANSLATION	protein_coding	-	-	-	91	0	1	0	0	0	-3,-6	-	-	1.998	MINOR
ENSMUSG00000045211	Nudt18	ENSMUST00000089049	ENSMUSP00000086450	TRANSLATION	protein_coding	-	CCDS27258.1	1	323	4	3	5.1	68.1	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000045211	Nudt18	ENSMUST00000228768	ENSMUSP00000154258	TRANSLATION	protein_coding	-	-	-	265	4	2	0.5	52.6	0	-4,-5	-	-	12.634	MINOR
ENSMUSG00000094016	Trav15-1-dv6-1	ENSMUST00000103653	ENSMUSP00000100430	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.3	0	51.3	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094016	Trav15-1-dv6-1	ENSMUST00000200101	ENSMUSP00000143712	TRANSLATION	TR_V_gene	stop	-	-	117	0	1.3	0	51.3	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000044447	Dock5	ENSMUST00000224823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044447	Dock5	ENSMUST00000039135	ENSMUSP00000036674	TRANSLATION	protein_coding	-	CCDS36963.1	1	1868	0	20.9	7.5	918.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000044447	Dock5	ENSMUST00000226033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091155	Serpine3	ENSMUST00000171692	ENSMUSP00000125769	TRANSLATION	protein_coding	-	CCDS49518.1	1	401	0	5.38	0.5	258.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000036023	Parp2	ENSMUST00000228624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036023	Parp2	ENSMUST00000227810	ENSMUSP00000153963	TRANSLATION	nonsense_mediated_decay	start	-	-	42	0	0.6	0	30.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036023	Parp2	ENSMUST00000036126	ENSMUSP00000048877	TRANSLATION	protein_coding	-	CCDS27025.1	1	559	2	12.41	1	487	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000036023	Parp2	ENSMUST00000228833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036023	Parp2	ENSMUST00000228872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036023	Parp2	ENSMUST00000227705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036023	Parp2	ENSMUST00000226880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036023	Parp2	ENSMUST00000228672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022092	Ppp3cc	ENSMUST00000228265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022092	Ppp3cc	ENSMUST00000078434	ENSMUSP00000077532	TRANSLATION	protein_coding	-	CCDS36968.1	1	513	10	12.08	0.5	124.1	0	-4,-2	-	-	17.868	PRINCIPAL:2
ENSMUSG00000022092	Ppp3cc	ENSMUST00000228911	ENSMUSP00000153725	TRANSLATION	protein_coding	-	-	-	522	10	12.146	0.5	124.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022125	Cln5	ENSMUST00000227117	ENSMUSP00000154528	TRANSLATION	nonsense_mediated_decay	start	-	-	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022125	Cln5	ENSMUST00000022721	ENSMUSP00000022721	TRANSLATION	protein_coding	-	CCDS27314.1	1	341	0	0	1.5	552.5	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000042104	Uggt2	ENSMUST00000138720	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042104	Uggt2	ENSMUST00000131424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042104	Uggt2	ENSMUST00000127153	ENSMUSP00000117738	TRANSLATION	nonsense_mediated_decay	start	-	1	466	0	0	0	252.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042104	Uggt2	ENSMUST00000126023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000173391	ENSMUSP00000133772	TRANSLATION	protein_coding	start/stop	-	5	216	2	0	0	53.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042104	Uggt2	ENSMUST00000138923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000148022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000156203	ENSMUSP00000121249	TRANSLATION	protein_coding	-	CCDS37013.2	5	1504	2	0	0.5	1150.1	0	2,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000042104	Uggt2	ENSMUST00000148648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000153693	ENSMUSP00000123327	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	0	0	126.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042104	Uggt2	ENSMUST00000173470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000154130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042104	Uggt2	ENSMUST00000136924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042104	Uggt2	ENSMUST00000123350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095368	Gm3012	ENSMUST00000112802	ENSMUSP00000108421	TRANSLATION	protein_coding	start	-	1	225	0	0	0	76.5	0	-1,-4	-	-	-1	PRINCIPAL:3
ENSMUSG00000095368	Gm3012	ENSMUST00000179486	ENSMUSP00000137047	TRANSLATION	protein_coding	stop	-	2	204	0	0	0.5	76.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000040717	Il17rd	ENSMUST00000223942	ENSMUSP00000153108	TRANSLATION	protein_coding	-	-	-	167	0	0	0	171	0	1,-4	-	-	0	MINOR
ENSMUSG00000040717	Il17rd	ENSMUST00000225829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040717	Il17rd	ENSMUST00000226105	ENSMUSP00000153140	TRANSLATION	protein_coding	-	-	-	562	0	0.88	0	213.1	2	-4,-5	-	-	6	MINOR
ENSMUSG00000040717	Il17rd	ENSMUST00000225146	ENSMUSP00000153543	TRANSLATION	protein_coding	-	-	-	594	0	0.88	0.5	213.1	2	-4,-5	-	-	6	MINOR
ENSMUSG00000040717	Il17rd	ENSMUST00000035336	ENSMUSP00000036076	TRANSLATION	protein_coding	-	CCDS26885.1	1	738	0	0.88	1.5	398.7	2	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000041078	Grid1	ENSMUST00000227253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041078	Grid1	ENSMUST00000173307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041078	Grid1	ENSMUST00000043349	ENSMUSP00000044009	TRANSLATION	protein_coding	-	CCDS26944.1	1	1009	12	13.39	9.8	475.4	0	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000051969	Tlr11	ENSMUST00000063570	ENSMUSP00000068906	TRANSLATION	protein_coding	-	-	-	926	0	0.28	0	89.3	1	0,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000051969	Tlr11	ENSMUST00000185091	ENSMUSP00000138814	TRANSLATION	protein_coding	-	CCDS27012.2	2	931	0	0.28	1.5	89.3	1	-2,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000091649	Phf11b	ENSMUST00000166121	ENSMUSP00000127857	TRANSLATION	protein_coding	-	CCDS49510.1	1	276	12	1.88	0.5	75.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090889	Gm17428	ENSMUST00000085949	ENSMUSP00000083111	TRANSLATION	protein_coding	start/stop	-	-	31	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021804	Rgr	ENSMUST00000022338	ENSMUSP00000022338	TRANSLATION	protein_coding	-	CCDS26949.1	1	291	0	4.83	6.3	79.4	10	-3,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000021804	Rgr	ENSMUST00000224506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021804	Rgr	ENSMUST00000225403	ENSMUSP00000153006	TRANSLATION	nonsense_mediated_decay	-	-	-	112	0	1.47	0	25.8	3	-3,-4	-	-	-1	MINOR
ENSMUSG00000021804	Rgr	ENSMUST00000225229	ENSMUSP00000153565	TRANSLATION	nonsense_mediated_decay	-	-	-	89	0	0.27	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021804	Rgr	ENSMUST00000225070	ENSMUSP00000153012	TRANSLATION	protein_coding	-	-	-	261	0	4.35	0	79.4	10	-3,-4	-	-	11.04	MINOR
ENSMUSG00000021804	Rgr	ENSMUST00000225634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021990	Spata13	ENSMUST00000162939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021990	Spata13	ENSMUST00000160095	ENSMUSP00000123744	TRANSLATION	protein_coding	start/stop	-	3	240	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021990	Spata13	ENSMUST00000160973	ENSMUSP00000123928	TRANSLATION	protein_coding	-	CCDS49516.1	1	1244	0	7.75	0.5	230.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000021990	Spata13	ENSMUST00000159729	ENSMUSP00000125702	TRANSLATION	protein_coding	stop	-	2	138	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021990	Spata13	ENSMUST00000159169	ENSMUSP00000125163	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021990	Spata13	ENSMUST00000159135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021990	Spata13	ENSMUST00000162945	ENSMUSP00000123888	TRANSLATION	protein_coding	-	CCDS79328.1	1	574	0	7.75	5.1	230.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000021990	Spata13	ENSMUST00000162131	ENSMUSP00000124586	TRANSLATION	protein_coding	stop	-	2	369	0	3	0	40.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021990	Spata13	ENSMUST00000022566	ENSMUSP00000022566	TRANSLATION	protein_coding	-	CCDS49516.1	5	1244	0	7.75	0.5	230.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000021822	Plau	ENSMUST00000022368	ENSMUSP00000022368	TRANSLATION	protein_coding	-	CCDS26858.1	1	433	6	8.33	0.5	292.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021822	Plau	ENSMUST00000224141	ENSMUSP00000153684	TRANSLATION	nonsense_mediated_decay	-	-	-	35	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000068697	Myoz1	ENSMUST00000090469	ENSMUSP00000087955	TRANSLATION	protein_coding	-	CCDS36819.1	1	296	0	0	3.9	341.3	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000068697	Myoz1	ENSMUST00000224436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068697	Myoz1	ENSMUST00000225231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068697	Myoz1	ENSMUST00000224472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021978	Extl3	ENSMUST00000225633	ENSMUSP00000153547	TRANSLATION	protein_coding	-	CCDS27211.1	-	919	11	2.32	17	536.2	1	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021978	Extl3	ENSMUST00000022550	ENSMUSP00000022550	TRANSLATION	protein_coding	-	CCDS27211.1	5	919	11	2.32	17	536.2	1	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021978	Extl3	ENSMUST00000223989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055538	Zcchc24	ENSMUST00000184642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055538	Zcchc24	ENSMUST00000069180	ENSMUSP00000068677	TRANSLATION	protein_coding	-	CCDS49419.1	1	241	5	0	8.8	90.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068758	Il3ra	ENSMUST00000224415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068758	Il3ra	ENSMUST00000090591	ENSMUSP00000088079	TRANSLATION	protein_coding	-	CCDS26827.1	1	396	0	4.5036	0.5	103.9	2	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000068758	Il3ra	ENSMUST00000224877	ENSMUSP00000153086	TRANSLATION	protein_coding	-	-	-	303	0	3.5836	0	103.9	2	1,-2	-	-	10.158	MINOR
ENSMUSG00000068758	Il3ra	ENSMUST00000225560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068758	Il3ra	ENSMUST00000225775	ENSMUSP00000153664	TRANSLATION	protein_coding	stop	-	-	187	0	1.92	0	62.7	0	1,-3	-	-	-1	MINOR
ENSMUSG00000068758	Il3ra	ENSMUST00000224163	ENSMUSP00000153358	TRANSLATION	protein_coding	-	CCDS26827.1	-	396	0	4.5036	0.5	103.9	2	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000068758	Il3ra	ENSMUST00000223589	ENSMUSP00000153460	TRANSLATION	protein_coding	-	-	-	196	0	2.045	0	44.6	0	1,-3	-	-	3.522	MINOR
ENSMUSG00000050505	Pcdh20	ENSMUST00000192557	ENSMUSP00000141860	TRANSLATION	protein_coding	-	CCDS27306.1	1	952	48	0.32	1.5	244.9	2	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000050505	Pcdh20	ENSMUST00000061628	ENSMUSP00000054774	TRANSLATION	protein_coding	-	CCDS27306.1	1	952	48	0.32	1.5	244.9	2	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000021850	ccdc198	ENSMUST00000022398	ENSMUSP00000022398	TRANSLATION	protein_coding	-	-	1	303	0	0	0	492.9	0	-4,-2	-	-	5.688	ALTERNATIVE:2
ENSMUSG00000021850	ccdc198	ENSMUST00000148109	ENSMUSP00000114834	TRANSLATION	nonsense_mediated_decay	-	-	3	65	0	0	0	93.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021850	ccdc198	ENSMUST00000228936	ENSMUSP00000154726	TRANSLATION	protein_coding	-	CCDS26996.1	-	294	0	0	0.5	498.1	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000021850	ccdc198	ENSMUST00000227113	ENSMUSP00000153946	TRANSLATION	protein_coding	stop	-	-	251	0	0	0	353.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021850	ccdc198	ENSMUST00000130853	ENSMUSP00000117775	TRANSLATION	protein_coding	stop	-	5	216	0	0	0	349.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034623	Prss55	ENSMUST00000171503	ENSMUSP00000128485	TRANSLATION	protein_coding	-	-	1	225	2	2.2	0	139.4	0	1,-2	-	-	8.37	MINOR
ENSMUSG00000034623	Prss55	ENSMUST00000089338	ENSMUSP00000086752	TRANSLATION	protein_coding	-	CCDS36952.1	1	321	6	3.08	0.5	203.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034623	Prss55	ENSMUST00000169113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094349	Gm8082	ENSMUST00000165349	ENSMUSP00000129043	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000021998	Lcp1	ENSMUST00000148609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021998	Lcp1	ENSMUST00000125833	ENSMUSP00000116033	TRANSLATION	protein_coding	stop	-	3	104	11	2.5	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021998	Lcp1	ENSMUST00000143539	ENSMUSP00000118721	TRANSLATION	protein_coding	stop	-	2	76	11	1.75	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021998	Lcp1	ENSMUST00000149883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021998	Lcp1	ENSMUST00000124499	ENSMUSP00000121201	TRANSLATION	protein_coding	-	CCDS27276.1	1	627	11	14.1	8.8	335.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021998	Lcp1	ENSMUST00000122840	ENSMUSP00000117984	TRANSLATION	protein_coding	stop	-	5	101	11	2.5	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021998	Lcp1	ENSMUST00000130510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021998	Lcp1	ENSMUST00000131802	ENSMUSP00000117137	TRANSLATION	protein_coding	-	CCDS27276.1	1	627	11	14.1	8.8	335.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021998	Lcp1	ENSMUST00000145303	ENSMUSP00000116271	TRANSLATION	protein_coding	-	CCDS27276.1	1	627	11	14.1	8.8	335.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021998	Lcp1	ENSMUST00000124608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021998	Lcp1	ENSMUST00000134114	ENSMUSP00000121376	TRANSLATION	protein_coding	stop	-	3	121	11	3	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040472	Rabggta	ENSMUST00000062861	ENSMUSP00000061498	TRANSLATION	protein_coding	-	-	1	297	0	8.25	0	107.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040472	Rabggta	ENSMUST00000227132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000228826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000226209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000228604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000163889	ENSMUSP00000128668	TRANSLATION	protein_coding	-	CCDS36933.1	1	567	5	13.75	7.5	278.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040472	Rabggta	ENSMUST00000228899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000227617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040472	Rabggta	ENSMUST00000169237	ENSMUSP00000133032	TRANSLATION	protein_coding	-	CCDS36933.1	1	567	5	13.75	7.5	278.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040472	Rabggta	ENSMUST00000227061	ENSMUSP00000154725	TRANSLATION	protein_coding	-	CCDS36933.1	-	567	5	13.75	7.5	278.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000091227	Gm3755	ENSMUST00000169555	ENSMUSP00000132468	TRANSLATION	protein_coding	start	-	5	167	0	0	0	74.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000042354	Gnl3	ENSMUST00000226379	ENSMUSP00000154428	TRANSLATION	protein_coding	start	-	-	159	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042354	Gnl3	ENSMUST00000227869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000228341	ENSMUSP00000153981	TRANSLATION	protein_coding	stop	-	-	156	4	1.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042354	Gnl3	ENSMUST00000228739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000226740	ENSMUSP00000154477	TRANSLATION	nonsense_mediated_decay	-	-	-	136	0	0	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042354	Gnl3	ENSMUST00000228713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000227467	ENSMUSP00000154745	TRANSLATION	protein_coding	stop	-	-	146	0	0	0	80.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042354	Gnl3	ENSMUST00000228774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000227087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042354	Gnl3	ENSMUST00000228427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000037739	ENSMUSP00000047119	TRANSLATION	protein_coding	-	CCDS26905.1	1	538	12	4.18	0.5	119.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042354	Gnl3	ENSMUST00000227170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000227389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042354	Gnl3	ENSMUST00000226220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096023	Gm3542	ENSMUST00000169362	ENSMUSP00000127565	TRANSLATION	protein_coding	-	-	5	270	0	0	0	80.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022061	Nkx3-1	ENSMUST00000022646	ENSMUSP00000022646	TRANSLATION	protein_coding	-	CCDS27237.1	1	237	0	1	1.5	73.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068437	Olfr725	ENSMUST00000089844	ENSMUSP00000087282	TRANSLATION	protein_coding	-	CCDS36904.1	-	321	0	0.36	5.1	155.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000068437	Olfr725	ENSMUST00000206920	ENSMUSP00000145828	TRANSLATION	protein_coding	-	CCDS36904.1	2	321	0	0.36	5.1	155.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000114797	Gm49336	ENSMUST00000223713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114797	Gm49336	ENSMUST00000225311	ENSMUSP00000153117	TRANSLATION	protein_coding	-	-	-	558	0	12.23	1	872.3	0	-4,-7	-	-	4.302	MINOR
ENSMUSG00000114797	Gm49336	ENSMUST00000224575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000114797	Gm49336	ENSMUST00000041905	ENSMUSP00000038716	TRANSLATION	protein_coding	-	CCDS27175.1	1	587	0	13.08	6.3	984.1	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000114797	Gm49336	ENSMUST00000225572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000114797	Gm49336	ENSMUST00000225111	ENSMUSP00000153625	TRANSLATION	protein_coding	-	-	-	537	0	12.08	0	870.7	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000114797	Gm49336	ENSMUST00000223596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095056	Gm3159	ENSMUST00000164038	ENSMUSP00000126043	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	69	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095056	Gm3159	ENSMUST00000177764	ENSMUSP00000137464	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	69	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095056	Gm3159	ENSMUST00000167245	ENSMUSP00000133201	TRANSLATION	protein_coding	-	-	5	267	0	0	0	69	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000041765	Ubac2	ENSMUST00000227936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041765	Ubac2	ENSMUST00000227684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041765	Ubac2	ENSMUST00000039803	ENSMUSP00000043245	TRANSLATION	protein_coding	-	CCDS37019.1	1	345	0	1.16	10.8	44.9	0	-2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000041765	Ubac2	ENSMUST00000226998	ENSMUSP00000154341	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037824	Tspan14	ENSMUST00000224209	ENSMUSP00000153208	TRANSLATION	protein_coding	-	CCDS26956.1	-	270	0	2.08	14.8	206.9	4	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037824	Tspan14	ENSMUST00000047652	ENSMUSP00000035263	TRANSLATION	protein_coding	-	CCDS26956.1	1	270	0	2.08	14.8	206.9	4	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037824	Tspan14	ENSMUST00000224349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076889	Traj41	ENSMUST00000103701	ENSMUSP00000142973	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021965	Ska3	ENSMUST00000022536	ENSMUSP00000022536	TRANSLATION	protein_coding	-	CCDS27160.1	1	411	0	2.75	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000021965	Ska3	ENSMUST00000225646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021965	Ska3	ENSMUST00000224108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021965	Ska3	ENSMUST00000225753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021965	Ska3	ENSMUST00000223726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000959	Oxa1l	ENSMUST00000228719	ENSMUSP00000153955	TRANSLATION	protein_coding	start	-	-	121	0	0.8	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000000959	Oxa1l	ENSMUST00000196882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000959	Oxa1l	ENSMUST00000198107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000959	Oxa1l	ENSMUST00000228567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000959	Oxa1l	ENSMUST00000000985	ENSMUSP00000000985	TRANSLATION	protein_coding	-	CCDS27086.1	1	433	0	1.99	1.5	0	4	-2,2	-	-	6	PRINCIPAL:1
ENSMUSG00000022185	Acin1	ENSMUST00000129700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000141453	ENSMUSP00000116664	TRANSLATION	protein_coding	-	CCDS56956.1	1	552	0	1	0.5	92.1	0	-4,-5	-	-	10.032	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000141993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000147714	ENSMUSP00000119080	TRANSLATION	protein_coding	start	-	1	1272	0	1	0	124.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000111484	ENSMUSP00000107109	TRANSLATION	protein_coding	-	-	5	1298	0	1	0.5	124.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022185	Acin1	ENSMUST00000125265	ENSMUSP00000120445	TRANSLATION	protein_coding	stop	-	5	256	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000123875	ENSMUSP00000117210	TRANSLATION	protein_coding	stop	-	5	221	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000152773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000022793	ENSMUSP00000022793	TRANSLATION	protein_coding	-	CCDS27097.1	1	1338	0	1	0.5	124.9	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000022185	Acin1	ENSMUST00000167495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022185	Acin1	ENSMUST00000136909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022185	Acin1	ENSMUST00000133706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000167015	ENSMUSP00000125776	TRANSLATION	protein_coding	-	CCDS49492.1	1	581	0	1	6.3	92.1	0	-4,-5	-	-	12.032	ALTERNATIVE:1
ENSMUSG00000022185	Acin1	ENSMUST00000124271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000148754	ENSMUSP00000122003	TRANSLATION	protein_coding	-	CCDS49492.1	5	581	0	1	6.3	92.1	0	-4,-5	-	-	12.032	ALTERNATIVE:1
ENSMUSG00000022185	Acin1	ENSMUST00000170299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022185	Acin1	ENSMUST00000138321	ENSMUSP00000119326	TRANSLATION	protein_coding	start	-	2	141	0	1	0	81.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000134808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022185	Acin1	ENSMUST00000126166	ENSMUSP00000114546	TRANSLATION	protein_coding	-	CCDS56957.1	1	565	0	1	0.5	92.1	0	-4,-5	-	-	10.032	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000151487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000132242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000150371	ENSMUSP00000118069	TRANSLATION	protein_coding	-	CCDS27098.2	1	634	0	1	0.5	92.1	0	-4,-5	-	-	10.032	MINOR
ENSMUSG00000022185	Acin1	ENSMUST00000125767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000149713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022185	Acin1	ENSMUST00000137763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022185	Acin1	ENSMUST00000022794	ENSMUSP00000022794	TRANSLATION	protein_coding	-	-	5	580	0	1	6.3	92.1	0	-4,-5	-	-	12.032	ALTERNATIVE:1
ENSMUSG00000091733	Gm8094	ENSMUST00000165136	ENSMUSP00000126820	TRANSLATION	protein_coding	-	-	5	211	0	0	0	90.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000068289	Cma2	ENSMUST00000089555	ENSMUSP00000086984	TRANSLATION	protein_coding	-	CCDS27136.1	1	246	7	4.2	0.5	193.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000068289	Cma2	ENSMUST00000228263	ENSMUSP00000154424	TRANSLATION	protein_coding	-	-	-	190	5	3.3	0.5	140.1	0	-4,-5	-	-	11.268	MINOR
ENSMUSG00000076870	Trdj1	ENSMUST00000103682	ENSMUSP00000143430	TRANSLATION	TR_J_gene	start/stop	-	-	17	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076881	Traj50	ENSMUST00000103693	ENSMUSP00000142740	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000096003	Gm3500	ENSMUST00000178058	ENSMUSP00000137408	TRANSLATION	protein_coding	stop	-	1	203	0	0	0.5	75.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096003	Gm3500	ENSMUST00000177986	ENSMUSP00000137355	TRANSLATION	protein_coding	-	CCDS56924.1	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090799	Klhl33	ENSMUST00000164415	ENSMUSP00000129810	TRANSLATION	protein_coding	-	CCDS56952.1	5	533	0	1.68	1.7	185.2	0	-4,-2	-	-	4.71	MINOR
ENSMUSG00000090799	Klhl33	ENSMUST00000226765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090799	Klhl33	ENSMUST00000227271	ENSMUSP00000154785	TRANSLATION	protein_coding	-	-	-	793	0	3.16	1.5	257.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090799	Klhl33	ENSMUST00000170855	ENSMUSP00000131456	TRANSLATION	protein_coding	-	-	1	218	0	0.42	0	0	0	-4,-5	-	-	0.522	MINOR
ENSMUSG00000053868	Gm5142	ENSMUST00000066558	ENSMUSP00000067031	TRANSLATION	protein_coding	-	CCDS27167.1	1	133	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000053868	Gm5142	ENSMUST00000224214	-	NO_TRANSLATION	lincRNA
ENSMUSG00000050350	Gpr18	ENSMUST00000055475	ENSMUSP00000061410	TRANSLATION	protein_coding	-	CCDS27342.1	1	331	0	0.48	5.1	117.6	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039376	Synpo2l	ENSMUST00000119483	ENSMUSP00000112760	TRANSLATION	protein_coding	-	CCDS79268.1	1	749	0	0	1.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039376	Synpo2l	ENSMUST00000117386	ENSMUSP00000112792	TRANSLATION	protein_coding	-	CCDS79269.1	1	978	0	1.8	1.5	45.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039376	Synpo2l	ENSMUST00000057090	ENSMUSP00000053176	TRANSLATION	protein_coding	-	CCDS26849.1	1	975	0	1.8	0.5	32.5	0	-4,-5	-	-	10.26	MINOR
ENSMUSG00000021903	Galnt15	ENSMUST00000022460	ENSMUSP00000022460	TRANSLATION	protein_coding	-	CCDS36859.1	1	638	16	7.56	1.7	179	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021903	Galnt15	ENSMUST00000164208	ENSMUSP00000131978	TRANSLATION	protein_coding	-	-	1	514	5	5.56	0	74.9	0	-1,-5	-	-	1.998	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000163350	ENSMUSP00000131566	TRANSLATION	protein_coding	-	-	1	920	0	13.35	0	445.4	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000163957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021911	Parg	ENSMUST00000171871	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021911	Parg	ENSMUST00000170840	ENSMUSP00000132454	TRANSLATION	protein_coding	-	-	5	456	0	12	0	445.4	0	-4,-5	-	-	7.302	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000164137	ENSMUSP00000154704	TRANSLATION	protein_coding	-	-	5	661	0	6.35	0	79.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000167699	ENSMUSP00000130178	TRANSLATION	nonsense_mediated_decay	-	-	3	43	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000170129	ENSMUSP00000127362	TRANSLATION	nonsense_mediated_decay	-	-	5	95	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021911	Parg	ENSMUST00000022470	ENSMUSP00000022470	TRANSLATION	protein_coding	-	CCDS36865.1	1	961	0	14.35	0.5	445.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021911	Parg	ENSMUST00000170637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021911	Parg	ENSMUST00000171279	ENSMUSP00000128629	TRANSLATION	protein_coding	stop	-	1	186	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022157	Mcpt8	ENSMUST00000015594	ENSMUSP00000015594	TRANSLATION	protein_coding	-	CCDS27141.1	1	247	7	4.32	1.5	187.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022157	Mcpt8	ENSMUST00000225107	ENSMUSP00000153507	TRANSLATION	nonsense_mediated_decay	-	-	-	68	2	1.32	0	39.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000021950	Anxa8	ENSMUST00000120077	ENSMUSP00000113662	TRANSLATION	protein_coding	-	CCDS70565.1	1	301	13	9.16	1.5	272.8	0	-4,-5	-	-	11.082	MINOR
ENSMUSG00000021950	Anxa8	ENSMUST00000022519	ENSMUSP00000022519	TRANSLATION	protein_coding	-	CCDS26932.1	1	327	17	9.91	9.6	321.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000041471	Shld2	ENSMUST00000228337	ENSMUSP00000153771	TRANSLATION	protein_coding	stop	-	-	114	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041471	Shld2	ENSMUST00000228626	ENSMUSP00000154080	TRANSLATION	protein_coding	-	-	-	488	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000041471	Shld2	ENSMUST00000111917	ENSMUSP00000107548	TRANSLATION	protein_coding	-	CCDS36874.1	1	891	3	0	0.5	268.2	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000041471	Shld2	ENSMUST00000227006	ENSMUSP00000154637	TRANSLATION	protein_coding	stop	-	-	75	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041471	Shld2	ENSMUST00000228132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041471	Shld2	ENSMUST00000227375	ENSMUSP00000154555	TRANSLATION	protein_coding	stop	-	-	129	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041471	Shld2	ENSMUST00000228704	ENSMUSP00000154214	TRANSLATION	protein_coding	stop	-	-	216	3	0	0	103.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054051	Ercc6	ENSMUST00000066807	ENSMUSP00000066256	TRANSLATION	protein_coding	-	CCDS36868.1	5	1481	6	10.34	0.5	311.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054051	Ercc6	ENSMUST00000227434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054051	Ercc6	ENSMUST00000226285	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054051	Ercc6	ENSMUST00000228035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054051	Ercc6	ENSMUST00000228549	ENSMUSP00000154246	TRANSLATION	nonsense_mediated_decay	start	-	-	48	0	0.64	0	40.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054051	Ercc6	ENSMUST00000228017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084902	Gm281	ENSMUST00000144914	ENSMUSP00000121887	TRANSLATION	protein_coding	-	-	5	860	25	7.36	0	57.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000056296	Synpr	ENSMUST00000223583	ENSMUSP00000153361	TRANSLATION	protein_coding	-	-	-	325	0	0	0	129.2	4	-4,-6	-	-	4.956	MINOR
ENSMUSG00000056296	Synpr	ENSMUST00000112656	ENSMUSP00000108275	TRANSLATION	protein_coding	-	CCDS49402.1	1	265	0	0	7.5	128.3	4	1,-2	-	-	7.401	MINOR
ENSMUSG00000056296	Synpr	ENSMUST00000153954	ENSMUSP00000116342	TRANSLATION	protein_coding	stop	-	3	125	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000056296	Synpr	ENSMUST00000225636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056296	Synpr	ENSMUST00000223580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056296	Synpr	ENSMUST00000070323	ENSMUSP00000064986	TRANSLATION	protein_coding	-	CCDS26821.1	1	285	0	0	8.8	146.6	5	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000056296	Synpr	ENSMUST00000147677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056296	Synpr	ENSMUST00000145700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056296	Synpr	ENSMUST00000226094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096908	Trav7-3	ENSMUST00000177622	ENSMUSP00000137590	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	71.9	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000044350	Lacc1	ENSMUST00000139809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044350	Lacc1	ENSMUST00000062789	ENSMUSP00000059173	TRANSLATION	protein_coding	-	CCDS27287.1	1	430	0	2.28	3.9	193.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000044350	Lacc1	ENSMUST00000142300	ENSMUSP00000135628	TRANSLATION	protein_coding	stop	-	3	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000227942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036339	Tmem260	ENSMUST00000156480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036339	Tmem260	ENSMUST00000133744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036339	Tmem260	ENSMUST00000124720	ENSMUSP00000118376	TRANSLATION	protein_coding	-	CCDS79318.1	1	551	0	0	0.5	0	11	-4,-7	-	-	0	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000153765	ENSMUSP00000116155	TRANSLATION	nonsense_mediated_decay	-	-	1	111	0	0	0	0	4	-2,0	-	-	-1	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000226422	ENSMUSP00000154083	TRANSLATION	protein_coding	-	-	-	712	2	0	0	0	20	-2,0	-	-	2	PRINCIPAL:1
ENSMUSG00000036339	Tmem260	ENSMUST00000111735	ENSMUSP00000107364	TRANSLATION	protein_coding	-	CCDS26993.2	1	703	0	0	1.5	0	20	-2,0	-	-	0	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000228697	ENSMUSP00000153822	TRANSLATION	protein_coding	start/stop	-	-	243	0	0	0	0	14	-2,-5	-	-	-1	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000226400	ENSMUSP00000154803	TRANSLATION	protein_coding	-	-	-	142	0	0	0	0	1	-2,0	-	-	0	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000227440	ENSMUSP00000154360	TRANSLATION	protein_coding	-	-	-	629	0	0	0.5	0	20	-2,0	-	-	0	MINOR
ENSMUSG00000036339	Tmem260	ENSMUST00000226344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036339	Tmem260	ENSMUST00000226373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021820	Camk2g	ENSMUST00000225958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021820	Camk2g	ENSMUST00000225463	ENSMUSP00000153453	TRANSLATION	protein_coding	start/stop	-	-	168	0	3.965	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000225660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021820	Camk2g	ENSMUST00000100837	ENSMUSP00000098398	TRANSLATION	protein_coding	-	CCDS26856.1	1	495	22	15.97	15	451.9	2	-4,-5	-	-	20.974	ALTERNATIVE:1
ENSMUSG00000021820	Camk2g	ENSMUST00000225635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021820	Camk2g	ENSMUST00000225609	ENSMUSP00000152903	TRANSLATION	protein_coding	start/stop	-	-	224	1	6.138	0	63.7	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000226630	ENSMUSP00000154158	TRANSLATION	protein_coding	-	-	-	565	22	16.483	6.3	450.4	2	-4,-5	-	-	19.426	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000224887	ENSMUSP00000153165	TRANSLATION	protein_coding	start/stop	-	-	274	4	8.005	0	176.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000223863	ENSMUSP00000153007	TRANSLATION	nonsense_mediated_decay	start	-	-	71	4	2.21	0	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000224566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021820	Camk2g	ENSMUST00000224804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021820	Camk2g	ENSMUST00000225328	ENSMUSP00000152992	TRANSLATION	protein_coding	start/stop	-	-	190	4	4.08	0	185	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000224245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021820	Camk2g	ENSMUST00000080440	ENSMUSP00000079298	TRANSLATION	protein_coding	-	CCDS26855.1	1	518	22	16.285	15	451.9	2	-4,-5	-	-	21.604	ALTERNATIVE:1
ENSMUSG00000021820	Camk2g	ENSMUST00000223712	ENSMUSP00000153471	TRANSLATION	protein_coding	start/stop	-	-	241	1	5.94	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021820	Camk2g	ENSMUST00000071816	ENSMUSP00000071720	TRANSLATION	protein_coding	-	CCDS26857.1	1	529	22	16.483	13.8	451.9	2	-4,-5	-	-	21.656	PRINCIPAL:4
ENSMUSG00000021820	Camk2g	ENSMUST00000225800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015443	Gzmn	ENSMUST00000015587	ENSMUSP00000015587	TRANSLATION	protein_coding	-	CCDS27145.1	1	248	7	4.2	0.5	196.5	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000015443	Gzmn	ENSMUST00000225535	ENSMUSP00000153137	TRANSLATION	protein_coding	-	-	-	213	3	3.2	0.5	145.7	0	4,-1	-	-	9.528	MINOR
ENSMUSG00000021846	Peli2	ENSMUST00000226260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021846	Peli2	ENSMUST00000228519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021846	Peli2	ENSMUST00000228456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021846	Peli2	ENSMUST00000226513	ENSMUSP00000154335	TRANSLATION	protein_coding	-	-	-	155	0	2	0	69.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021846	Peli2	ENSMUST00000081029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021846	Peli2	ENSMUST00000227362	ENSMUSP00000154661	TRANSLATION	protein_coding	start	-	-	225	0	3.75	0	318	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021846	Peli2	ENSMUST00000073150	ENSMUSP00000072894	TRANSLATION	protein_coding	-	CCDS36901.1	1	419	6	5.85	11.8	730.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021846	Peli2	ENSMUST00000226828	ENSMUSP00000154648	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040055	Gjb6	ENSMUST00000160703	ENSMUSP00000124927	TRANSLATION	protein_coding	stop	-	3	173	0	1	0	204.2	3	-3,-7	-	-	-1	MINOR
ENSMUSG00000040055	Gjb6	ENSMUST00000162931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040055	Gjb6	ENSMUST00000224544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040055	Gjb6	ENSMUST00000039380	ENSMUSP00000035630	TRANSLATION	protein_coding	-	CCDS27154.1	1	261	0	2	8.8	278.4	4	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000100486	Gm4131	ENSMUST00000186010	ENSMUSP00000147049	TRANSLATION	protein_coding	-	-	5	318	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000100486	Gm4131	ENSMUST00000209021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079380	Gm8271	ENSMUST00000171053	ENSMUSP00000132746	TRANSLATION	protein_coding	-	-	5	218	0	0	0.5	71.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076916	Traj13	ENSMUST00000103728	ENSMUSP00000142869	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0.5	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076917	Traj12	ENSMUST00000103729	ENSMUSP00000142357	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000023064	Sncg	ENSMUST00000023826	ENSMUSP00000023826	TRANSLATION	protein_coding	-	CCDS26937.1	1	123	0	2.77	2.9	185.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022106	Rcbtb2	ENSMUST00000171163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000164822	ENSMUSP00000131588	TRANSLATION	protein_coding	-	CCDS27266.1	1	551	0	10.82	3.9	268.5	0	-4,-5	-	-	13.094	PRINCIPAL:2
ENSMUSG00000022106	Rcbtb2	ENSMUST00000165727	ENSMUSP00000128479	TRANSLATION	protein_coding	stop	-	3	90	0	2.21	0	77.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000165646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000165567	ENSMUSP00000130240	TRANSLATION	protein_coding	stop	-	5	172	0	3.73	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000163339	ENSMUSP00000131374	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000022702	ENSMUSP00000022702	TRANSLATION	protein_coding	-	CCDS27266.1	5	551	0	10.82	3.9	268.5	0	-4,-5	-	-	13.094	PRINCIPAL:2
ENSMUSG00000022106	Rcbtb2	ENSMUST00000163650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000165429	ENSMUSP00000127258	TRANSLATION	protein_coding	stop	-	5	157	0	4.06	0	54.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000170370	ENSMUSP00000130732	TRANSLATION	protein_coding	stop	-	3	128	0	2.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000170368	ENSMUSP00000126276	TRANSLATION	protein_coding	stop	-	5	86	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000167401	ENSMUSP00000128221	TRANSLATION	protein_coding	-	-	5	72	0	0.48	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000163546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000166875	ENSMUSP00000130168	TRANSLATION	protein_coding	start/stop	-	1	119	0	1.4	0	48.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000170677	ENSMUSP00000126510	TRANSLATION	protein_coding	-	-	1	527	0	10.82	6.3	268.5	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000022106	Rcbtb2	ENSMUST00000169479	ENSMUSP00000126898	TRANSLATION	protein_coding	-	CCDS27266.1	1	551	0	10.82	3.9	268.5	0	-4,-5	-	-	13.094	PRINCIPAL:2
ENSMUSG00000022106	Rcbtb2	ENSMUST00000170278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000171070	ENSMUSP00000132723	TRANSLATION	protein_coding	stop	-	5	69	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000165334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022106	Rcbtb2	ENSMUST00000167021	ENSMUSP00000131496	TRANSLATION	protein_coding	stop	-	5	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000163533	ENSMUSP00000130828	TRANSLATION	protein_coding	stop	-	3	149	0	2.98	0	30.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000164298	ENSMUSP00000126651	TRANSLATION	nonsense_mediated_decay	start	-	5	292	0	6.27	0	141	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000171767	ENSMUSP00000127397	TRANSLATION	protein_coding	-	-	1	517	0	10.07	0	268.5	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000163797	ENSMUSP00000132125	TRANSLATION	nonsense_mediated_decay	start	-	5	219	0	3.76	0	36	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022106	Rcbtb2	ENSMUST00000169513	ENSMUSP00000128579	TRANSLATION	protein_coding	-	-	1	527	0	10.82	6.3	268.5	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000022106	Rcbtb2	ENSMUST00000110952	ENSMUSP00000106577	TRANSLATION	protein_coding	-	CCDS27266.1	1	551	0	10.82	3.9	268.5	0	-4,-5	-	-	13.094	PRINCIPAL:2
ENSMUSG00000094966	Trav9-2	ENSMUST00000103654	ENSMUSP00000100431	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	57.5	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000090874	Olfr733	ENSMUST00000214756	ENSMUSP00000150087	TRANSLATION	protein_coding	-	CCDS27009.1	5	308	0	0.2	8.8	139	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000090874	Olfr733	ENSMUST00000214372	ENSMUSP00000149085	TRANSLATION	protein_coding	-	CCDS27009.1	5	308	0	0.2	8.8	139	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000090874	Olfr733	ENSMUST00000216195	ENSMUSP00000149807	TRANSLATION	protein_coding	-	CCDS27009.1	5	308	0	0.2	8.8	139	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000090874	Olfr733	ENSMUST00000163469	ENSMUSP00000128332	TRANSLATION	protein_coding	-	CCDS27009.1	-	308	0	0.2	8.8	139	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000114378	Gm49355	ENSMUST00000225871	ENSMUSP00000153106	TRANSLATION	protein_coding,RT	-	-	-	122	0	0	0	61.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035896	Rnase1	ENSMUST00000080126	ENSMUSP00000079025	TRANSLATION	protein_coding	-	CCDS27038.1	1	149	5	1	1.5	145.6	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000037580	Gch1	ENSMUST00000089959	ENSMUSP00000087405	TRANSLATION	protein_coding	-	CCDS26984.1	1	241	18	4.58	1.5	255.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000037580	Gch1	ENSMUST00000227883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034463	Scara3	ENSMUST00000042046	ENSMUSP00000046525	TRANSLATION	protein_coding	-	CCDS49524.1	1	606	0	0.7	1.5	74.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022076	Klhl1	ENSMUST00000022666	ENSMUSP00000022666	TRANSLATION	protein_coding	-	CCDS27308.1	1	751	0	7.74	5.3	494.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000040651	Tasor	ENSMUST00000225139	ENSMUSP00000153529	TRANSLATION	protein_coding	start	-	-	293	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040651	Tasor	ENSMUST00000223970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040651	Tasor	ENSMUST00000022450	ENSMUSP00000022450	TRANSLATION	protein_coding	-	CCDS49432.1	5	1498	0	0	0.5	180	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040651	Tasor	ENSMUST00000223688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022212	Cpne6	ENSMUST00000165262	ENSMUSP00000132999	TRANSLATION	protein_coding	-	CCDS49493.1	1	556	5	2.31	7.5	390.1	0	-4,-5	-	-	19.898	ALTERNATIVE:1
ENSMUSG00000022212	Cpne6	ENSMUST00000170155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022212	Cpne6	ENSMUST00000165725	ENSMUSP00000130799	TRANSLATION	nonsense_mediated_decay	-	-	5	126	0	0	0	35.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022212	Cpne6	ENSMUST00000074225	ENSMUSP00000073847	TRANSLATION	protein_coding	-	CCDS27112.1	1	557	5	2.31	7.5	391.8	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000022212	Cpne6	ENSMUST00000171643	ENSMUSP00000128555	TRANSLATION	protein_coding	-	CCDS27112.1	5	557	5	2.31	7.5	391.8	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000022212	Cpne6	ENSMUST00000163767	ENSMUSP00000126493	TRANSLATION	protein_coding	-	CCDS27112.1	1	557	5	2.31	7.5	391.8	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000022212	Cpne6	ENSMUST00000169869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095195	Gm3005	ENSMUST00000178728	ENSMUSP00000136856	TRANSLATION	protein_coding	-	-	5	216	0	0	0	74.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095195	Gm3005	ENSMUST00000178060	ENSMUSP00000136865	TRANSLATION	protein_coding	stop	-	1	148	0	0	0.5	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093969	Trav4n-4	ENSMUST00000103627	ENSMUSP00000100404	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	43.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000091148	Gm3182	ENSMUST00000169364	ENSMUSP00000126667	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091148	Gm3182	ENSMUST00000167902	ENSMUSP00000126316	TRANSLATION	protein_coding	-	-	5	263	0	0	0	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000021900	Btd	ENSMUST00000128014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021900	Btd	ENSMUST00000090147	ENSMUSP00000087608	TRANSLATION	protein_coding	-	CCDS36857.1	1	529	5	2.3	0.5	53.2	0	1,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000021884	Hacl1	ENSMUST00000134626	ENSMUSP00000114879	TRANSLATION	nonsense_mediated_decay	-	-	5	74	4	1.666	0	36.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000167066	ENSMUSP00000132913	TRANSLATION	protein_coding	-	-	5	521	50	10.44	1.2	307.6	0	-4,-5	-	-	13.275	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000155210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021884	Hacl1	ENSMUST00000156431	ENSMUSP00000114922	TRANSLATION	nonsense_mediated_decay	-	-	1	581	50	11.49	7.5	352.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000140078	ENSMUSP00000154592	TRANSLATION	protein_coding	start	-	3	109	7	1.28	0	31.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000171414	ENSMUSP00000130268	TRANSLATION	nonsense_mediated_decay	-	-	5	122	8	3.35	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000135751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021884	Hacl1	ENSMUST00000127204	ENSMUSP00000120452	TRANSLATION	protein_coding	-	-	5	554	46	10.74	1.2	285.8	0	-4,-5	-	-	9.903	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000022437	ENSMUSP00000022437	TRANSLATION	protein_coding	-	CCDS26915.1	1	581	50	11.49	7.5	352.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000021884	Hacl1	ENSMUST00000165955	ENSMUSP00000129090	TRANSLATION	nonsense_mediated_decay	-	-	5	105	8	2.85	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021884	Hacl1	ENSMUST00000128629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021884	Hacl1	ENSMUST00000139501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021884	Hacl1	ENSMUST00000156189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091722	Siah3	ENSMUST00000164848	ENSMUSP00000130827	TRANSLATION	protein_coding	-	CCDS49540.1	1	268	6	1	5.1	147.9	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000022193	Psmb5	ENSMUST00000227257	ENSMUSP00000154672	TRANSLATION	protein_coding	-	-	-	177	7	2.5	0	56.7	0	-4,-7	-	-	8.67	MINOR
ENSMUSG00000022193	Psmb5	ENSMUST00000022803	ENSMUSP00000022803	TRANSLATION	protein_coding	-	CCDS27095.1	1	264	9	3.5	2.8	164.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021871	Gm49342	ENSMUST00000227052	ENSMUSP00000154171	TRANSLATION	protein_coding,RT	start/stop	-	-	250	7	4.48	0	130.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000052334	1700024B05Rik	ENSMUST00000064162	ENSMUSP00000064211	TRANSLATION	protein_coding	-	-	1	167	0	0	0	82.7	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000052334	1700024B05Rik	ENSMUST00000168972	ENSMUSP00000127922	TRANSLATION	protein_coding	-	-	5	150	0	0	0	82.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079391	Gm2974	ENSMUST00000164512	ENSMUSP00000130084	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079391	Gm2974	ENSMUST00000180184	ENSMUSP00000137158	TRANSLATION	protein_coding	-	-	5	148	0	0	0.5	69.6	0	-4,-5	-	-	5.532	ALTERNATIVE:2
ENSMUSG00000021892	Sh3bp5	ENSMUST00000100730	ENSMUSP00000098296	TRANSLATION	protein_coding	-	CCDS84108.1	1	456	0	0	0.5	253.8	0	-2,0	-	-	2.676	MINOR
ENSMUSG00000021892	Sh3bp5	ENSMUST00000091903	ENSMUSP00000089517	TRANSLATION	protein_coding	-	CCDS36855.1	1	458	0	0	1.5	309.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021892	Sh3bp5	ENSMUST00000140002	ENSMUSP00000117152	TRANSLATION	nonsense_mediated_decay	-	-	1	463	0	0	0	309.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021892	Sh3bp5	ENSMUST00000147586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021987	Mtmr6	ENSMUST00000224366	ENSMUSP00000153403	TRANSLATION	protein_coding	-	-	-	655	7	11.13	3.9	460.9	0	-4,-5	-	-	17.008	MINOR
ENSMUSG00000021987	Mtmr6	ENSMUST00000022563	ENSMUSP00000022563	TRANSLATION	protein_coding	-	CCDS27176.1	1	617	7	11.63	3.9	477.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000021987	Mtmr6	ENSMUST00000225574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021987	Mtmr6	ENSMUST00000224164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000162107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000161332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000162217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000223854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000161445	ENSMUSP00000125630	TRANSLATION	protein_coding	-	CCDS79266.1	1	524	10	12.33	6.5	129.9	0	-4,-7	-	-	20.538	ALTERNATIVE:1
ENSMUSG00000021816	Ppp3cb	ENSMUST00000160812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021816	Ppp3cb	ENSMUST00000159027	ENSMUSP00000125722	TRANSLATION	protein_coding	-	CCDS26846.1	1	525	10	12.33	7.5	129.9	0	-4,-7	-	-	21	PRINCIPAL:3
ENSMUSG00000021816	Ppp3cb	ENSMUST00000161989	ENSMUSP00000125582	TRANSLATION	protein_coding	-	-	1	497	10	11	0	129.9	0	-4,-7	-	-	15.342	MINOR
ENSMUSG00000021816	Ppp3cb	ENSMUST00000022355	ENSMUSP00000022355	TRANSLATION	protein_coding	-	CCDS79267.1	5	515	10	12	6.5	129.9	0	-4,-7	-	-	19.878	MINOR
ENSMUSG00000033712	Ccar2	ENSMUST00000227589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033712	Ccar2	ENSMUST00000035612	ENSMUSP00000036924	TRANSLATION	protein_coding	-	CCDS49534.1	1	922	0	0	3.9	232.6	0	-4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000064128	Cenpj	ENSMUST00000229861	ENSMUSP00000155215	TRANSLATION	protein_coding	start/stop	-	-	439	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064128	Cenpj	ENSMUST00000225951	ENSMUSP00000153013	TRANSLATION	protein_coding	-	CCDS27150.1	-	1344	0	5.85	0.5	288.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000064128	Cenpj	ENSMUST00000224748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064128	Cenpj	ENSMUST00000065302	ENSMUSP00000065949	TRANSLATION	protein_coding	-	CCDS27150.1	1	1344	0	5.85	0.5	288.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000064128	Cenpj	ENSMUST00000226026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021872	Rnase10	ENSMUST00000022424	ENSMUSP00000022424	TRANSLATION	protein_coding	-	CCDS27030.1	1	245	0	0.4	1.5	66.9	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000021872	Rnase10	ENSMUST00000164632	ENSMUSP00000131065	TRANSLATION	protein_coding	-	CCDS49480.1	1	208	0	0.4	0.5	66.9	0	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000037798	Mat1a	ENSMUST00000047286	ENSMUSP00000044288	TRANSLATION	protein_coding	-	CCDS26959.1	1	396	13	8.75	17.3	530.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037798	Mat1a	ENSMUST00000225720	ENSMUSP00000153488	TRANSLATION	protein_coding	-	CCDS26959.1	-	396	13	8.75	17.3	530.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000037798	Mat1a	ENSMUST00000224514	ENSMUSP00000152905	TRANSLATION	protein_coding	stop	-	-	186	7	4.75	0	235.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021977	1700129C05Rik	ENSMUST00000162271	ENSMUSP00000125240	TRANSLATION	protein_coding	-	-	3	58	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000021977	1700129C05Rik	ENSMUST00000159858	ENSMUSP00000125361	TRANSLATION	protein_coding	-	-	5	191	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000021977	1700129C05Rik	ENSMUST00000162674	ENSMUSP00000125379	TRANSLATION	protein_coding	-	-	3	117	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000021977	1700129C05Rik	ENSMUST00000022548	ENSMUSP00000022548	TRANSLATION	protein_coding	-	CCDS27166.1	1	218	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000022024	Sugt1	ENSMUST00000228675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022024	Sugt1	ENSMUST00000228669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022024	Sugt1	ENSMUST00000054908	ENSMUSP00000052942	TRANSLATION	protein_coding	-	CCDS36988.1	1	336	0	6.55	1.5	194.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022024	Sugt1	ENSMUST00000227497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022024	Sugt1	ENSMUST00000226320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045731	Pnoc	ENSMUST00000059339	ENSMUSP00000054210	TRANSLATION	protein_coding	-	CCDS27213.1	1	187	0	0	0.5	63.4	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000045731	Pnoc	ENSMUST00000224594	ENSMUSP00000153589	TRANSLATION	protein_coding	-	-	-	212	0	0	0.5	63.4	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000034235	Usp54	ENSMUST00000123287	ENSMUSP00000117503	TRANSLATION	protein_coding	start/stop	-	3	222	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034235	Usp54	ENSMUST00000143267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034235	Usp54	ENSMUST00000035340	ENSMUSP00000036214	TRANSLATION	protein_coding	-	CCDS26847.2	5	1588	8	0	1.5	75.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000034235	Usp54	ENSMUST00000022356	ENSMUSP00000022356	TRANSLATION	protein_coding	-	CCDS26847.2	5	1588	8	0	1.5	75.9	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000034235	Usp54	ENSMUST00000127342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094877	Trav3n-3	ENSMUST00000197557	ENSMUSP00000142822	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	56.9	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000094877	Trav3n-3	ENSMUST00000103625	ENSMUSP00000100402	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	56.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096038	Trav13n-3	ENSMUST00000179580	ENSMUSP00000136279	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	56.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000000606	Vmn2r88	ENSMUST00000159674	ENSMUSP00000125126	TRANSLATION	protein_coding	-	-	1	848	4	2.84	0.5	388	12	1,-3	-	-	15.34	ALTERNATIVE:2
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233126	ENSMUSP00000156772	TRANSLATION	protein_coding	-	-	-	512	0	1.36	0	120.5	0	1,-3	-	-	2.382	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000163019	ENSMUSP00000124837	TRANSLATION	protein_coding	-	-	1	437	0	0.88	0.5	117.8	0	1,-3	-	-	1.422	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233280	ENSMUSP00000156423	TRANSLATION	protein_coding	-	-	-	850	4	3.104	0.5	387.5	12	1,-3	-	-	15.838	ALTERNATIVE:2
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233766	ENSMUSP00000156821	TRANSLATION	protein_coding	-	-	-	436	0	0.88	0.5	117.8	0	1,-3	-	-	1.422	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233394	ENSMUSP00000156456	TRANSLATION	protein_coding	-	-	-	849	4	3.104	0.5	387.5	12	1,-3	-	-	15.838	ALTERNATIVE:2
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233920	ENSMUSP00000156955	TRANSLATION	protein_coding	-	-	-	774	4	2.624	0	382.8	12	1,-3	-	-	14.596	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000022438	ENSMUSP00000022438	TRANSLATION	protein_coding	-	CCDS56953.1	5	857	4	3.17	0.5	378	12	1,-3	-	-	15.4	PRINCIPAL:2
ENSMUSG00000000606	Vmn2r88	ENSMUST00000232951	ENSMUSP00000156671	TRANSLATION	protein_coding	-	-	-	773	4	2.36	0	385.3	12	1,-3	-	-	14.218	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233651	ENSMUSP00000156606	TRANSLATION	protein_coding	-	-	-	437	0	0.88	0.5	117.8	0	1,-3	-	-	1.422	MINOR
ENSMUSG00000000606	Vmn2r88	ENSMUST00000233848	ENSMUSP00000156397	TRANSLATION	protein_coding	-	-	-	848	4	2.84	0.5	388	12	1,-3	-	-	15.34	ALTERNATIVE:2
ENSMUSG00000000606	Vmn2r88	ENSMUST00000232797	ENSMUSP00000156867	TRANSLATION	protein_coding	-	-	-	511	0	1.36	0.5	120.5	0	1,-3	-	-	2.382	MINOR
ENSMUSG00000068245	Phf11d	ENSMUST00000160425	ENSMUSP00000124578	TRANSLATION	protein_coding	-	-	5	269	12	2.58	0	69.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000068245	Phf11d	ENSMUST00000161754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068245	Phf11d	ENSMUST00000095157	ENSMUSP00000092779	TRANSLATION	protein_coding	-	CCDS27170.3	1	320	12	2.58	0.5	69.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000068245	Phf11d	ENSMUST00000161031	ENSMUSP00000125181	TRANSLATION	protein_coding	-	-	2	337	12	2.58	1	69.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000095797	Gm8246	ENSMUST00000179411	ENSMUSP00000136840	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095797	Gm8246	ENSMUST00000180788	ENSMUSP00000138067	TRANSLATION	protein_coding	-	-	5	263	0	0	0	73	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079271	1700049E17Rik1	ENSMUST00000095985	ENSMUSP00000093683	TRANSLATION	protein_coding	-	-	2	198	0	0	0.5	85	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000062014	Gmfb	ENSMUST00000226937	ENSMUSP00000154491	TRANSLATION	protein_coding	start	-	-	137	0	3.25	0	103.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062014	Gmfb	ENSMUST00000145958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062014	Gmfb	ENSMUST00000079314	ENSMUSP00000078293	TRANSLATION	protein_coding	-	-	5	142	0	4.25	21.5	118.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000062014	Gmfb	ENSMUST00000226842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062014	Gmfb	ENSMUST00000228065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062014	Gmfb	ENSMUST00000226333	ENSMUSP00000153896	TRANSLATION	protein_coding	start	-	-	155	0	4.25	0	97.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062014	Gmfb	ENSMUST00000228515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062014	Gmfb	ENSMUST00000111817	ENSMUSP00000107448	TRANSLATION	protein_coding	-	CCDS36898.1	1	142	0	4.25	21.5	118.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000068015	Lrch1	ENSMUST00000230218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068015	Lrch1	ENSMUST00000226799	ENSMUSP00000159358	TRANSLATION	protein_coding	-	-	-	277	0	1.72	0	45.6	0	-4,-5	-	-	2.004	MINOR
ENSMUSG00000068015	Lrch1	ENSMUST00000088970	ENSMUSP00000086363	TRANSLATION	protein_coding	-	CCDS36976.1	1	709	0	6.535	0.5	112.2	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000068015	Lrch1	ENSMUST00000230381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068015	Lrch1	ENSMUST00000227433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068015	Lrch1	ENSMUST00000228252	ENSMUSP00000154004	TRANSLATION	protein_coding	-	-	-	682	0	6.535	0.5	112.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000068015	Lrch1	ENSMUST00000229311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068015	Lrch1	ENSMUST00000228134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022179	4931414P19Rik	ENSMUST00000022786	ENSMUSP00000022786	TRANSLATION	protein_coding	-	CCDS27094.1	1	541	0	0	3.9	863.1	0	-2,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000022179	4931414P19Rik	ENSMUST00000227280	ENSMUSP00000154754	TRANSLATION	protein_coding	start	-	-	39	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022179	4931414P19Rik	ENSMUST00000228422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047098	Rnf31	ENSMUST00000140178	ENSMUSP00000118215	TRANSLATION	protein_coding	start	-	5	912	21	15.6	0	132.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047098	Rnf31	ENSMUST00000019443	ENSMUSP00000019443	TRANSLATION	protein_coding	-	CCDS27118.1	1	1066	21	18.6	1.5	256.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047098	Rnf31	ENSMUST00000126544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047098	Rnf31	ENSMUST00000227708	ENSMUSP00000154756	TRANSLATION	nonsense_mediated_decay	start	-	-	103	7	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047098	Rnf31	ENSMUST00000137296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047098	Rnf31	ENSMUST00000227664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047098	Rnf31	ENSMUST00000133903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072572	Slc39a2	ENSMUST00000160668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072572	Slc39a2	ENSMUST00000047726	ENSMUSP00000038707	TRANSLATION	protein_coding	-	CCDS36914.1	1	309	0	0	5.1	193.9	0	1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000079378	Gm8279	ENSMUST00000112767	ENSMUSP00000108387	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	76.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079378	Gm8279	ENSMUST00000165713	ENSMUSP00000131107	TRANSLATION	protein_coding	-	-	5	263	0	0	0	76.5	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079378	Gm8279	ENSMUST00000170040	ENSMUSP00000127970	TRANSLATION	protein_coding	stop	-	5	204	0	0	0.5	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059674	Cdh24	ENSMUST00000067784	ENSMUSP00000066005	TRANSLATION	protein_coding	-	CCDS36923.1	5	781	52	9.145	6.3	390.9	1	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000059674	Cdh24	ENSMUST00000227124	ENSMUSP00000154248	TRANSLATION	protein_coding	start/stop	-	-	253	16	2.6	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000021748	Pdhb	ENSMUST00000224466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021748	Pdhb	ENSMUST00000225735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021748	Pdhb	ENSMUST00000225274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021748	Pdhb	ENSMUST00000022268	ENSMUSP00000022268	TRANSLATION	protein_coding	-	CCDS36800.1	1	359	7	7.25	7.5	287.5	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000021748	Pdhb	ENSMUST00000225747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021748	Pdhb	ENSMUST00000224690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021748	Pdhb	ENSMUST00000224864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095711	Trav14-2	ENSMUST00000184874	ENSMUSP00000139225	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	66.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095711	Trav14-2	ENSMUST00000179267	ENSMUSP00000136351	TRANSLATION	TR_V_gene	stop	-	-	121	0	1.066	0	66.2	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000022177	Haus4	ENSMUST00000228883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022177	Haus4	ENSMUST00000226358	ENSMUSP00000154329	TRANSLATION	protein_coding	stop	-	-	214	0	0	0	83.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022177	Haus4	ENSMUST00000226832	ENSMUSP00000154345	TRANSLATION	protein_coding	start	-	-	43	0	0	0	54.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022177	Haus4	ENSMUST00000226250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022177	Haus4	ENSMUST00000227954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022177	Haus4	ENSMUST00000228043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022177	Haus4	ENSMUST00000022784	ENSMUSP00000022784	TRANSLATION	protein_coding	-	CCDS27092.1	1	363	0	0	8.8	281.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000059456	Ptk2b	ENSMUST00000136216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059456	Ptk2b	ENSMUST00000148104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059456	Ptk2b	ENSMUST00000178730	ENSMUSP00000137008	TRANSLATION	protein_coding	-	CCDS49526.1	1	1009	2	20.43	7.5	538.5	0	-4,-7	-	-	17	ALTERNATIVE:1
ENSMUSG00000059456	Ptk2b	ENSMUST00000154865	ENSMUSP00000122683	TRANSLATION	protein_coding	start	-	1	382	0	5.18	0	268.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059456	Ptk2b	ENSMUST00000089250	ENSMUSP00000086661	TRANSLATION	protein_coding	-	CCDS27220.1	1	967	2	20.43	7.5	538.5	0	-4,-7	-	-	17	PRINCIPAL:3
ENSMUSG00000059456	Ptk2b	ENSMUST00000022622	ENSMUSP00000022622	TRANSLATION	protein_coding	-	CCDS49526.1	5	1009	2	20.43	7.5	538.5	0	-4,-7	-	-	17	ALTERNATIVE:1
ENSMUSG00000059456	Ptk2b	ENSMUST00000111121	ENSMUSP00000106750	TRANSLATION	protein_coding	-	CCDS49525.1	1	1005	2	20.43	0.5	538.5	0	-4,-7	-	-	14	MINOR
ENSMUSG00000059456	Ptk2b	ENSMUST00000127083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022210	Dhrs4	ENSMUST00000227488	ENSMUSP00000154006	TRANSLATION	protein_coding	stop	-	-	124	13	3.25	0	48.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022210	Dhrs4	ENSMUST00000227542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022210	Dhrs4	ENSMUST00000226168	ENSMUSP00000154481	TRANSLATION	protein_coding	-	-	-	216	25	4.75	0.5	122.8	0	-4,0	-	-	6.408	MINOR
ENSMUSG00000022210	Dhrs4	ENSMUST00000228353	ENSMUSP00000153847	TRANSLATION	protein_coding	start	-	-	194	24	4	0	74.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022210	Dhrs4	ENSMUST00000227513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022210	Dhrs4	ENSMUST00000226298	ENSMUSP00000154666	TRANSLATION	protein_coding	start	-	-	76	6	2.25	0	49.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022210	Dhrs4	ENSMUST00000022821	ENSMUSP00000022821	TRANSLATION	protein_coding	-	CCDS27111.1	1	279	30	7.25	3.9	177.1	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000022210	Dhrs4	ENSMUST00000226902	ENSMUSP00000154474	TRANSLATION	protein_coding	start/stop	-	-	179	21	4.5	0	83.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021797	9230112D13Rik	ENSMUST00000022325	ENSMUSP00000022325	TRANSLATION	protein_coding	-	CCDS56948.1	1	137	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000046210	Olfr735	ENSMUST00000049729	ENSMUSP00000056851	TRANSLATION	protein_coding	-	CCDS27011.1	-	354	0	0.42	0.5	167.7	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000046210	Olfr735	ENSMUST00000216634	ENSMUSP00000153148	TRANSLATION	protein_coding	-	-	3	323	0	0.42	0	167.7	5	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000041014	Nrg3	ENSMUST00000176122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041014	Nrg3	ENSMUST00000173780	ENSMUSP00000134727	TRANSLATION	protein_coding	-	-	5	689	0	1.05	0.5	37.6	2	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041014	Nrg3	ENSMUST00000168810	ENSMUSP00000129783	TRANSLATION	protein_coding	-	CCDS49450.1	1	697	0	1.05	0.5	36.2	2	-3,-5	-	-	11.778	ALTERNATIVE:2
ENSMUSG00000041014	Nrg3	ENSMUST00000166968	ENSMUSP00000136884	TRANSLATION	protein_coding	-	CCDS26954.1	1	713	0	1.05	0.5	37.6	2	-3,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035626	Olfr1509	ENSMUST00000206437	ENSMUSP00000146274	TRANSLATION	protein_coding	stop	-	3	156	0	1	0	96.3	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000035626	Olfr1509	ENSMUST00000215030	ENSMUSP00000150016	TRANSLATION	protein_coding	-	CCDS27060.1	5	308	0	1.3	1.5	170.9	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035626	Olfr1509	ENSMUST00000206718	ENSMUSP00000145551	TRANSLATION	protein_coding	stop	-	3	125	0	0	0	76.6	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000035626	Olfr1509	ENSMUST00000045066	ENSMUSP00000046688	TRANSLATION	protein_coding	-	CCDS27060.1	-	308	0	1.3	1.5	170.9	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035626	Olfr1509	ENSMUST00000206100	ENSMUSP00000146173	TRANSLATION	protein_coding	-	CCDS27060.1	3	308	0	1.3	1.5	170.9	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035626	Olfr1509	ENSMUST00000205900	ENSMUSP00000145819	TRANSLATION	protein_coding	-	CCDS27060.1	3	308	0	1.3	1.5	170.9	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000008813	Tppp2	ENSMUST00000008957	ENSMUSP00000008957	TRANSLATION	protein_coding	-	CCDS49487.1	1	170	0	3	6.4	230.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000008813	Tppp2	ENSMUST00000177625	ENSMUSP00000136454	TRANSLATION	protein_coding	-	CCDS49487.1	3	170	0	3	6.4	230.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000105393	Trav7d-5	ENSMUST00000197128	ENSMUSP00000143500	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	60.4	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000022099	Dmtn	ENSMUST00000110984	ENSMUSP00000106612	TRANSLATION	protein_coding	-	CCDS27259.1	5	383	0	1.85	7.6	347.4	0	-4,-2	-	-	14.484	PRINCIPAL:2
ENSMUSG00000022099	Dmtn	ENSMUST00000227453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022099	Dmtn	ENSMUST00000228001	ENSMUSP00000153945	TRANSLATION	protein_coding	-	-	-	358	0	1.85	6.6	250.4	0	-4,-5	-	-	8.544	MINOR
ENSMUSG00000022099	Dmtn	ENSMUST00000228295	ENSMUSP00000154373	TRANSLATION	protein_coding	-	-	-	380	0	1.85	7.6	259	0	-4,-5	-	-	9.18	MINOR
ENSMUSG00000022099	Dmtn	ENSMUST00000022694	ENSMUSP00000022694	TRANSLATION	protein_coding	-	-	5	405	0	1.85	7.6	356	0	-4,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000022099	Dmtn	ENSMUST00000228824	ENSMUSP00000154045	TRANSLATION	protein_coding	-	-	-	358	0	1.85	6.6	250.4	0	-4,-5	-	-	8.544	MINOR
ENSMUSG00000022099	Dmtn	ENSMUST00000228009	ENSMUSP00000153828	TRANSLATION	protein_coding	-	CCDS27259.1	-	383	0	1.85	7.6	347.4	0	-4,-2	-	-	14.484	PRINCIPAL:2
ENSMUSG00000022099	Dmtn	ENSMUST00000227331	ENSMUSP00000154695	TRANSLATION	nonsense_mediated_decay	start	-	-	106	0	0	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022099	Dmtn	ENSMUST00000226543	ENSMUSP00000154775	TRANSLATION	protein_coding	stop	-	-	21	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022099	Dmtn	ENSMUST00000022695	ENSMUSP00000022695	TRANSLATION	protein_coding	-	-	5	380	0	1.85	7.6	259	0	-4,-5	-	-	9.18	MINOR
ENSMUSG00000096024	Gm17174	ENSMUST00000178962	ENSMUSP00000137954	TRANSLATION	protein_coding	-	-	5	211	0	0	0	87.5	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000021999	Cpb2	ENSMUST00000227817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021999	Cpb2	ENSMUST00000022576	ENSMUSP00000022576	TRANSLATION	protein_coding	-	CCDS27277.1	1	422	8	9.9	6.3	359.8	0	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000036291	Ap5m1	ENSMUST00000227431	ENSMUSP00000153761	TRANSLATION	protein_coding	-	-	-	398	0	0	0	108.1	0	-4,-2	-	-	3.474	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000227066	ENSMUSP00000153926	TRANSLATION	protein_coding	start	-	-	101	0	0	0	32.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000227608	ENSMUSP00000154035	TRANSLATION	nonsense_mediated_decay	-	-	-	90	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000037473	ENSMUSP00000046536	TRANSLATION	protein_coding	-	CCDS26995.1	1	490	0	0	7.6	150.2	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000036291	Ap5m1	ENSMUST00000228238	ENSMUSP00000154186	TRANSLATION	protein_coding	-	-	-	307	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000227410	ENSMUSP00000154044	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000227991	ENSMUSP00000154211	TRANSLATION	protein_coding	start/stop	-	-	159	0	0	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036291	Ap5m1	ENSMUST00000226695	ENSMUSP00000154575	TRANSLATION	protein_coding	start	-	-	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091306	Gm17606	ENSMUST00000169818	ENSMUSP00000131860	TRANSLATION	protein_coding	start/stop	-	5	78	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091568	Gm8206	ENSMUST00000171428	ENSMUSP00000127533	TRANSLATION	protein_coding	-	-	5	148	0	0	0	54.9	0	-4,-5	-	-	4.326	MINOR
ENSMUSG00000091568	Gm8206	ENSMUST00000168733	ENSMUSP00000129374	TRANSLATION	protein_coding	-	-	5	171	0	0	0	76.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091568	Gm8206	ENSMUST00000164139	ENSMUSP00000128269	TRANSLATION	protein_coding	-	-	5	133	0	0	0	54.9	0	-4,-5	-	-	4.326	MINOR
ENSMUSG00000002325	Irf9	ENSMUST00000138037	ENSMUSP00000119477	TRANSLATION	protein_coding	-	CCDS49497.1	1	417	0	4.12	0.5	287.9	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000002325	Irf9	ENSMUST00000145680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002325	Irf9	ENSMUST00000226275	ENSMUSP00000154635	TRANSLATION	protein_coding	start	-	-	63	0	1.2	0	52.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002325	Irf9	ENSMUST00000126269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002325	Irf9	ENSMUST00000130697	ENSMUSP00000120359	TRANSLATION	protein_coding	-	CCDS27119.1	1	399	0	4.12	0.5	287.9	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000002325	Irf9	ENSMUST00000134863	ENSMUSP00000120525	TRANSLATION	protein_coding	-	CCDS49496.1	1	465	0	4.12	0.5	287.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002325	Irf9	ENSMUST00000136109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079386	Gm3173	ENSMUST00000166848	ENSMUSP00000127993	TRANSLATION	protein_coding	-	-	5	131	0	0	0	70	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079386	Gm3173	ENSMUST00000164603	ENSMUSP00000125850	TRANSLATION	protein_coding	-	-	1	172	0	0	0.5	70	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000079386	Gm3173	ENSMUST00000112776	ENSMUSP00000108396	TRANSLATION	protein_coding	-	-	5	172	0	0	0.5	67.3	0	-4,-5	-	-	5.766	ALTERNATIVE:2
ENSMUSG00000037833	Sh2d4b	ENSMUST00000096000	ENSMUSP00000093699	TRANSLATION	protein_coding	-	CCDS26955.1	1	431	0	2.04	2.7	53.5	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000037833	Sh2d4b	ENSMUST00000225854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037833	Sh2d4b	ENSMUST00000070328	ENSMUSP00000064708	TRANSLATION	protein_coding	-	-	1	178	0	2.04	0.5	53.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047222	Rnase2a	ENSMUST00000061936	ENSMUSP00000056418	TRANSLATION	protein_coding	-	CCDS27041.1	1	155	5	1	1.5	120.4	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000021819	Zswim8	ENSMUST00000224129	ENSMUSP00000153700	TRANSLATION	nonsense_mediated_decay	start	-	-	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021819	Zswim8	ENSMUST00000223561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000225743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000223782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000224485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000223840	ENSMUSP00000153027	TRANSLATION	protein_coding	-	-	-	1798	0	0	2.7	0	0	-4,-5	-	-	0.83	MINOR
ENSMUSG00000021819	Zswim8	ENSMUST00000225715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000224165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000225332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000224751	ENSMUSP00000153285	TRANSLATION	protein_coding	-	-	-	1825	0	0	2.7	0	0	-4,-5	-	-	0.83	MINOR
ENSMUSG00000021819	Zswim8	ENSMUST00000225187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000225010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021819	Zswim8	ENSMUST00000225911	ENSMUSP00000153144	TRANSLATION	protein_coding	start	-	-	360	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021819	Zswim8	ENSMUST00000022358	ENSMUSP00000022358	TRANSLATION	protein_coding	-	CCDS36820.1	1	1832	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000087666	Trav13-5	ENSMUST00000103671	ENSMUSP00000100448	TRANSLATION	TR_V_gene	stop	-	-	109	0	1.3	0	51.2	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094468	Trav6-4	ENSMUST00000180711	ENSMUSP00000137807	TRANSLATION	TR_V_gene	stop	-	-	115	0	1.2	0	37.3	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094468	Trav6-4	ENSMUST00000184650	ENSMUSP00000139283	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.2	0	37.3	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000036422	Pcdh8	ENSMUST00000039568	ENSMUSP00000045333	TRANSLATION	protein_coding	-	CCDS27303.1	1	1070	50	0.48	3.9	308.7	1	2,-2	-	-	19	PRINCIPAL:3
ENSMUSG00000036422	Pcdh8	ENSMUST00000195034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036422	Pcdh8	ENSMUST00000194214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036422	Pcdh8	ENSMUST00000195355	ENSMUSP00000141417	TRANSLATION	protein_coding	-	CCDS79349.1	1	973	50	0.48	3.9	308.7	1	2,-2	-	-	19	ALTERNATIVE:2
ENSMUSG00000095360	Gm3594	ENSMUST00000169152	ENSMUSP00000130337	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	66.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095360	Gm3594	ENSMUST00000179747	ENSMUSP00000137591	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	66.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095360	Gm3594	ENSMUST00000171784	ENSMUSP00000132178	TRANSLATION	protein_coding	-	-	5	267	0	0	0	66.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000022054	Nefm	ENSMUST00000111089	ENSMUSP00000106718	TRANSLATION	protein_coding	-	-	1	470	0	1.2	0	399.8	0	-4,-2	-	-	11.04	ALTERNATIVE:2
ENSMUSG00000022054	Nefm	ENSMUST00000022638	ENSMUSP00000022638	TRANSLATION	protein_coding	-	CCDS27233.1	1	848	0	1.2	0.5	415.8	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000076823	Trav13n-4	ENSMUST00000196105	ENSMUSP00000143372	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	47.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076823	Trav13n-4	ENSMUST00000103634	ENSMUSP00000100411	TRANSLATION	TR_V_gene	start/stop	-	-	89	0	1	0	47.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022113	Trim52	ENSMUST00000194236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022113	Trim52	ENSMUST00000022708	ENSMUSP00000022708	TRANSLATION	protein_coding	-	CCDS27323.1	-	233	6	0	0.5	52.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021905	Dph3	ENSMUST00000112001	ENSMUSP00000127944	TRANSLATION	nonsense_mediated_decay	-	-	1	54	3	1.3	0	47	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021905	Dph3	ENSMUST00000022461	ENSMUSP00000022461	TRANSLATION	protein_coding	-	CCDS36861.1	1	82	4	2.5	17	85.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021905	Dph3	ENSMUST00000167796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021905	Dph3	ENSMUST00000124303	ENSMUSP00000120583	TRANSLATION	protein_coding	-	CCDS36860.1	2	57	2	1.75	5.1	47.5	0	-4,-5	-	-	10.56	MINOR
ENSMUSG00000021905	Dph3	ENSMUST00000144149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021905	Dph3	ENSMUST00000067955	ENSMUSP00000068491	TRANSLATION	protein_coding	-	CCDS36861.1	1	82	4	2.5	17	85.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000021905	Dph3	ENSMUST00000112000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025551	Fgf14	ENSMUST00000095529	ENSMUSP00000093185	TRANSLATION	protein_coding	-	CCDS27355.1	1	252	7	4	15	138.5	0	-4,-2	-	-	20.002	MINOR
ENSMUSG00000025551	Fgf14	ENSMUST00000026631	ENSMUSP00000026631	TRANSLATION	protein_coding	-	CCDS27356.1	1	247	7	5	15	138.5	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000021961	4930578I06Rik	ENSMUST00000022532	ENSMUSP00000022532	TRANSLATION	protein_coding	-	CCDS36950.1	1	298	0	0	0.5	33.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000021961	4930578I06Rik	ENSMUST00000225544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021961	4930578I06Rik	ENSMUST00000224600	ENSMUSP00000152904	TRANSLATION	nonsense_mediated_decay	-	-	-	298	0	0	0.5	33.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048933	Olfr722	ENSMUST00000053290	ENSMUSP00000059721	TRANSLATION	protein_coding	-	CCDS26998.1	1	308	0	0.36	6.4	149.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000048933	Olfr722	ENSMUST00000213271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045201	Lrrc3b	ENSMUST00000223700	ENSMUSP00000153616	TRANSLATION	protein_coding	-	CCDS26829.1	-	259	0	0.48	17	89.8	1	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045201	Lrrc3b	ENSMUST00000055211	ENSMUSP00000059463	TRANSLATION	protein_coding	-	CCDS26829.1	1	259	0	0.48	17	89.8	1	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000045201	Lrrc3b	ENSMUST00000163937	ENSMUSP00000128624	TRANSLATION	protein_coding	-	CCDS26829.1	1	259	0	0.48	17	89.8	1	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000021880	Rnase6	ENSMUST00000226194	ENSMUSP00000154125	TRANSLATION	protein_coding	-	CCDS27037.1	-	153	5	1.2	1.5	139.7	0	-2,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000021880	Rnase6	ENSMUST00000228752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021880	Rnase6	ENSMUST00000095923	ENSMUSP00000093613	TRANSLATION	protein_coding	-	CCDS27037.1	1	153	5	1.2	1.5	139.7	0	-2,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000021880	Rnase6	ENSMUST00000226210	ENSMUSP00000154794	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000052395	Rft1	ENSMUST00000228686	ENSMUSP00000154587	TRANSLATION	nonsense_mediated_decay	-	-	-	280	0	0	0	217.3	11	-2,-4	-	-	-1	MINOR
ENSMUSG00000052395	Rft1	ENSMUST00000228211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052395	Rft1	ENSMUST00000228262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052395	Rft1	ENSMUST00000064230	ENSMUSP00000064153	TRANSLATION	protein_coding	-	CCDS26896.1	1	541	0	0	7.5	457.1	17	-2,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000052395	Rft1	ENSMUST00000226805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052395	Rft1	ENSMUST00000227338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052395	Rft1	ENSMUST00000226817	ENSMUSP00000154050	TRANSLATION	nonsense_mediated_decay	-	-	-	380	0	0	0	317.5	12	-2,-4	-	-	-1	MINOR
ENSMUSG00000094628	Gm3252	ENSMUST00000165619	ENSMUSP00000129533	TRANSLATION	protein_coding	-	-	5	216	0	0	0	75.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094628	Gm3252	ENSMUST00000178748	ENSMUSP00000137178	TRANSLATION	protein_coding	stop	-	5	150	0	0	0.5	69.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021796	Bmpr1a	ENSMUST00000171551	ENSMUSP00000129927	TRANSLATION	protein_coding	stop	-	5	38	0	0	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000021796	Bmpr1a	ENSMUST00000165280	ENSMUSP00000131984	TRANSLATION	protein_coding	-	-	1	500	19	9.166	0	221.4	2	2,-2	-	-	15.498	MINOR
ENSMUSG00000021796	Bmpr1a	ENSMUST00000171343	ENSMUSP00000126852	TRANSLATION	protein_coding	stop	-	5	108	0	2.5	0	34.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000021796	Bmpr1a	ENSMUST00000049005	ENSMUSP00000035900	TRANSLATION	protein_coding	-	CCDS26938.1	1	532	19	10.1	7.5	232	2	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000096254	Olfr724	ENSMUST00000213390	ENSMUSP00000149110	TRANSLATION	protein_coding	-	CCDS27000.1	5	309	0	0.42	2.7	144.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096254	Olfr724	ENSMUST00000075030	ENSMUSP00000074546	TRANSLATION	protein_coding	-	CCDS27000.1	-	309	0	0.42	2.7	144.5	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033083	Tbc1d4	ENSMUST00000100340	ENSMUSP00000097913	TRANSLATION	protein_coding	stop	-	1	839	2	1.56	0	58.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033083	Tbc1d4	ENSMUST00000161991	ENSMUSP00000125509	TRANSLATION	protein_coding	-	CCDS49556.1	5	1243	2	7.36	1.5	332.3	0	-4,-5	-	-	14.001	PRINCIPAL:2
ENSMUSG00000033083	Tbc1d4	ENSMUST00000159484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033083	Tbc1d4	ENSMUST00000159668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033083	Tbc1d4	ENSMUST00000160473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033083	Tbc1d4	ENSMUST00000160297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033083	Tbc1d4	ENSMUST00000159951	ENSMUSP00000124511	TRANSLATION	protein_coding	start	-	5	957	2	7.36	0	305.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033083	Tbc1d4	ENSMUST00000159664	ENSMUSP00000124734	TRANSLATION	nonsense_mediated_decay	start	-	1	99	3	0.76	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033083	Tbc1d4	ENSMUST00000161304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033083	Tbc1d4	ENSMUST00000162617	ENSMUSP00000124909	TRANSLATION	protein_coding	-	-	5	1306	2	7.36	1.5	332.3	0	-4,-5	-	-	14.001	ALTERNATIVE:2
ENSMUSG00000075486	Commd6	ENSMUST00000131022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075486	Commd6	ENSMUST00000168587	ENSMUSP00000131634	TRANSLATION	protein_coding	-	CCDS49557.1	1	83	0	0	0.5	59.9	0	-4,-5	-	-	5.844	ALTERNATIVE:2
ENSMUSG00000075486	Commd6	ENSMUST00000100339	ENSMUSP00000097912	TRANSLATION	protein_coding	-	CCDS37000.1	1	87	0	0	2.9	61.5	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000075486	Commd6	ENSMUST00000227868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022178	Ajuba	ENSMUST00000226463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022178	Ajuba	ENSMUST00000054487	ENSMUSP00000056977	TRANSLATION	protein_coding	-	CCDS27093.1	1	547	23	4.14	6.4	108.5	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000079357	Gm11100	ENSMUST00000112652	ENSMUSP00000159083	TRANSLATION	protein_coding	-	-	5	295	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000079357	Gm11100	ENSMUST00000159275	ENSMUSP00000158967	TRANSLATION	protein_coding	-	-	1	84	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000079357	Gm11100	ENSMUST00000238865	ENSMUSP00000159145	TRANSLATION	protein_coding	stop	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094607	Trav12d-3	ENSMUST00000177703	ENSMUSP00000137153	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	44.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021986	Amer2	ENSMUST00000224957	ENSMUSP00000152965	TRANSLATION	protein_coding	stop	-	-	254	0	0	0	178.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021986	Amer2	ENSMUST00000239079	ENSMUSP00000159188	TRANSLATION	protein_coding	-	CCDS27177.1	-	635	0	0	0.5	651.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000021986	Amer2	ENSMUST00000022561	ENSMUSP00000022561	TRANSLATION	protein_coding	-	-	-	672	0	0	1.5	651.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000021986	Amer2	ENSMUST00000225247	ENSMUSP00000153031	TRANSLATION	protein_coding	-	-	-	546	0	0	1	490.2	0	-4,-7	-	-	0	MINOR
ENSMUSG00000000365	Rnf17	ENSMUST00000095793	ENSMUSP00000093469	TRANSLATION	protein_coding	-	CCDS27149.1	1	1640	8	7.435	1.5	272.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000365	Rnf17	ENSMUST00000225737	ENSMUSP00000153573	TRANSLATION	nonsense_mediated_decay	start	-	-	80	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000365	Rnf17	ENSMUST00000225621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000365	Rnf17	ENSMUST00000225361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000365	Rnf17	ENSMUST00000223627	ENSMUSP00000153222	TRANSLATION	protein_coding	-	-	-	626	8	0	0	26.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000000365	Rnf17	ENSMUST00000223646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021938	Pspc1	ENSMUST00000163924	ENSMUSP00000133038	TRANSLATION	protein_coding	-	-	1	466	0	6.15	1	208.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000021938	Pspc1	ENSMUST00000168524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021938	Pspc1	ENSMUST00000022507	ENSMUSP00000022507	TRANSLATION	protein_coding	-	CCDS27151.1	1	523	0	6.15	1.5	208.6	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000021938	Pspc1	ENSMUST00000168575	ENSMUSP00000125780	TRANSLATION	nonsense_mediated_decay	start	-	3	59	0	1.2	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068392	Rnase13	ENSMUST00000089771	ENSMUSP00000087203	TRANSLATION	protein_coding	-	CCDS27048.1	-	153	0	0.48	5.1	96	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000094151	Gm7233	ENSMUST00000168619	ENSMUSP00000130326	TRANSLATION	protein_coding	-	-	5	198	0	0	0.5	85	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096176	Trdd2	ENSMUST00000177564	ENSMUSP00000142955	TRANSLATION	TR_D_gene	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000071547	Nt5dc2	ENSMUST00000226975	ENSMUSP00000154280	TRANSLATION	protein_coding	start	-	-	464	9	6.2	0	451.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071547	Nt5dc2	ENSMUST00000227794	ENSMUSP00000154613	TRANSLATION	protein_coding	-	-	-	493	9	6.95	0	517.3	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000071547	Nt5dc2	ENSMUST00000226588	ENSMUSP00000153794	TRANSLATION	protein_coding	stop	-	-	281	8	4.01	0	261.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071547	Nt5dc2	ENSMUST00000090212	ENSMUSP00000087680	TRANSLATION	protein_coding	-	CCDS36852.1	1	390	7	5.72	1.7	401.1	0	-4,-6	-	-	8.208	MINOR
ENSMUSG00000071547	Nt5dc2	ENSMUST00000227096	ENSMUSP00000154475	TRANSLATION	protein_coding	-	-	-	553	9	6.95	1.5	517.3	0	-4,0	-	-	18	PRINCIPAL:5
ENSMUSG00000071547	Nt5dc2	ENSMUST00000227690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033595	Lgi3	ENSMUST00000226548	ENSMUSP00000153920	TRANSLATION	protein_coding	-	-	-	165	0	3.6	0	43	0	4,-3	-	-	4.722	MINOR
ENSMUSG00000033595	Lgi3	ENSMUST00000226376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033595	Lgi3	ENSMUST00000047331	ENSMUSP00000046705	TRANSLATION	protein_coding	-	CCDS27255.1	1	548	0	4.24	6.4	291.3	0	4,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000022214	Dcaf11	ENSMUST00000117236	ENSMUSP00000113014	TRANSLATION	protein_coding	-	CCDS27115.1	1	549	0	6.638	1.5	61.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022214	Dcaf11	ENSMUST00000145983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022214	Dcaf11	ENSMUST00000143375	ENSMUSP00000121570	TRANSLATION	nonsense_mediated_decay	-	-	5	141	0	0.928	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000117701	ENSMUSP00000113620	TRANSLATION	protein_coding	-	-	5	509	0	5.854	0	61.6	0	-4,-2	-	-	10.434	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000147981	ENSMUSP00000123453	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000151245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022214	Dcaf11	ENSMUST00000128490	ENSMUSP00000114211	TRANSLATION	protein_coding	-	CCDS27115.1	2	549	0	6.638	1.5	61.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022214	Dcaf11	ENSMUST00000121622	ENSMUSP00000113202	TRANSLATION	protein_coding	-	CCDS27115.1	5	549	0	6.638	1.5	61.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022214	Dcaf11	ENSMUST00000150019	ENSMUSP00000117617	TRANSLATION	nonsense_mediated_decay	-	-	1	71	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000150481	ENSMUSP00000119001	TRANSLATION	protein_coding	stop	-	3	203	0	1.688	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000072530	ENSMUSP00000072344	TRANSLATION	protein_coding	-	CCDS27115.1	1	549	0	6.638	1.5	61.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022214	Dcaf11	ENSMUST00000155029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022214	Dcaf11	ENSMUST00000129310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022214	Dcaf11	ENSMUST00000153638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022214	Dcaf11	ENSMUST00000133256	ENSMUSP00000118404	TRANSLATION	protein_coding	stop	-	5	65	0	0.264	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000152681	ENSMUSP00000120296	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022214	Dcaf11	ENSMUST00000127991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022214	Dcaf11	ENSMUST00000143431	ENSMUSP00000118762	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079389	Gm3149	ENSMUST00000171810	ENSMUSP00000126595	TRANSLATION	protein_coding	-	-	5	257	0	0	0	68.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079389	Gm3149	ENSMUST00000179649	ENSMUSP00000136089	TRANSLATION	protein_coding	-	-	2	205	0	0	0.5	68.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079389	Gm3149	ENSMUST00000112779	ENSMUSP00000108399	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	68.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000071470	Ccnb1ip1	ENSMUST00000095932	ENSMUSP00000093622	TRANSLATION	protein_coding	-	CCDS49477.1	5	276	8	0	7.6	30.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071470	Ccnb1ip1	ENSMUST00000227614	ENSMUSP00000153980	TRANSLATION	protein_coding	stop	-	-	16	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095466	Gm3015	ENSMUST00000179803	ENSMUSP00000136555	TRANSLATION	protein_coding	start/stop	-	5	208	0	0	0	87.1	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095466	Gm3015	ENSMUST00000169384	ENSMUSP00000133272	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000079396	Gm3411	ENSMUST00000170104	ENSMUSP00000127293	TRANSLATION	protein_coding	-	CCDS56927.1	1	150	0	0	0.5	69.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076893	Traj37	ENSMUST00000103705	ENSMUSP00000143604	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000115483	Gm9732	ENSMUST00000228505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000115483	Gm9732	ENSMUST00000228117	ENSMUSP00000153714	TRANSLATION	protein_coding	start	-	-	110	0	0	0	35.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000115483	Gm9732	ENSMUST00000228840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071531	Gprin2	ENSMUST00000096019	ENSMUSP00000093718	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071531	Gprin2	ENSMUST00000226613	ENSMUSP00000154640	TRANSLATION	protein_coding	-	CCDS49443.1	-	455	0	0	1.5	93.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000071531	Gprin2	ENSMUST00000226511	ENSMUSP00000154257	TRANSLATION	protein_coding	stop	-	-	132	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023411	Nfatc4	ENSMUST00000226979	ENSMUSP00000154813	TRANSLATION	protein_coding	stop	-	-	58	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023411	Nfatc4	ENSMUST00000226293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023411	Nfatc4	ENSMUST00000226357	ENSMUSP00000154682	TRANSLATION	protein_coding	-	-	-	831	0	7.198	0	147.6	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000023411	Nfatc4	ENSMUST00000226869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023411	Nfatc4	ENSMUST00000226716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023411	Nfatc4	ENSMUST00000172271	ENSMUSP00000132763	TRANSLATION	protein_coding	-	CCDS49500.1	1	890	0	7.198	0.5	147.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023411	Nfatc4	ENSMUST00000024179	ENSMUSP00000024179	TRANSLATION	protein_coding	-	CCDS27132.1	1	901	0	7.198	1.5	147.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000023411	Nfatc4	ENSMUST00000226834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023411	Nfatc4	ENSMUST00000227746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023411	Nfatc4	ENSMUST00000228308	ENSMUSP00000154776	TRANSLATION	protein_coding	start/stop	-	-	170	0	4.264	0	93.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023411	Nfatc4	ENSMUST00000226536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021895	Arhgef3	ENSMUST00000049206	ENSMUSP00000046486	TRANSLATION	protein_coding	-	CCDS26886.1	1	531	0	6.9	6.3	129.8	0	-4,-2	-	-	14.445	PRINCIPAL:2
ENSMUSG00000021895	Arhgef3	ENSMUST00000225494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021895	Arhgef3	ENSMUST00000225949	ENSMUSP00000153396	TRANSLATION	protein_coding	-	-	-	551	0	6.9	3.9	129.8	0	-4,-6	-	-	13.338	MINOR
ENSMUSG00000021895	Arhgef3	ENSMUST00000224981	ENSMUSP00000153124	TRANSLATION	protein_coding	-	-	-	524	0	6.9	7.5	129.8	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000022174	Dad1	ENSMUST00000022781	ENSMUSP00000022781	TRANSLATION	protein_coding	-	CCDS27084.1	1	113	0	0	14	161	3	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000022174	Dad1	ENSMUST00000128231	ENSMUSP00000122366	TRANSLATION	protein_coding	-	CCDS27084.1	1	113	0	0	14	161	3	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000048502	Duxbl1	ENSMUST00000174383	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048502	Duxbl1	ENSMUST00000173155	ENSMUSP00000134001	TRANSLATION	protein_coding	stop	-	3	76	0	1.498	0	54.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048502	Duxbl1	ENSMUST00000049793	ENSMUSP00000056056	TRANSLATION	protein_coding	-	CCDS26878.1	1	350	0	2.698	0.5	119.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048502	Duxbl1	ENSMUST00000172465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048502	Duxbl1	ENSMUST00000173580	ENSMUSP00000134483	TRANSLATION	protein_coding	stop	-	3	189	0	2.698	0	119.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000048502	Duxbl1	ENSMUST00000172667	ENSMUSP00000133570	TRANSLATION	protein_coding	-	-	5	201	0	2.298	0	92.1	0	-4,-7	-	-	9.45	MINOR
ENSMUSG00000091923	Gm8267	ENSMUST00000228619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091923	Gm8267	ENSMUST00000226900	ENSMUSP00000153838	TRANSLATION	protein_coding	-	-	-	261	0	0	0	88.2	1	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000091923	Gm8267	ENSMUST00000165003	ENSMUSP00000129187	TRANSLATION	protein_coding	-	-	5	261	0	0	0	88.2	1	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000091923	Gm8267	ENSMUST00000169062	ENSMUSP00000129402	TRANSLATION	protein_coding	-	CCDS49463.1	5	204	0	0	0.5	88.2	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000021868	Ppif	ENSMUST00000125881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021868	Ppif	ENSMUST00000022419	ENSMUSP00000022419	TRANSLATION	protein_coding	-	CCDS26874.1	1	206	8	4.63	2.7	163.2	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000021868	Ppif	ENSMUST00000223872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076909	Traj20	ENSMUST00000103721	ENSMUSP00000143213	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000071229	Timm8a2	ENSMUST00000045976	ENSMUSP00000047497	TRANSLATION	protein_coding	-	CCDS37020.1	1	97	0	0.6	6.3	77.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063458	Lrmda	ENSMUST00000159107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063458	Lrmda	ENSMUST00000159777	ENSMUSP00000125751	TRANSLATION	protein_coding	-	-	3	180	0	2.694	0	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000063458	Lrmda	ENSMUST00000162337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063458	Lrmda	ENSMUST00000162540	ENSMUSP00000124436	TRANSLATION	protein_coding	-	-	1	191	0	2.628	0	0	0	-4,-6	-	-	5.856	ALTERNATIVE:2
ENSMUSG00000063458	Lrmda	ENSMUST00000075639	ENSMUSP00000075065	TRANSLATION	protein_coding	-	CCDS49415.1	1	229	0	2.628	3.9	0	0	-4,-6	-	-	6.856	PRINCIPAL:2
ENSMUSG00000063458	Lrmda	ENSMUST00000161249	ENSMUSP00000124221	TRANSLATION	protein_coding	stop	-	3	112	0	1.548	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063458	Lrmda	ENSMUST00000226003	ENSMUSP00000153387	TRANSLATION	protein_coding	start	-	-	77	0	0.198	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000220403	ENSMUSP00000151858	TRANSLATION	nonsense_mediated_decay	-	-	5	57	8	0	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000219496	ENSMUSP00000151823	TRANSLATION	nonsense_mediated_decay	start	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000219519	ENSMUSP00000151923	TRANSLATION	nonsense_mediated_decay	start	-	5	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000220208	ENSMUSP00000151422	TRANSLATION	nonsense_mediated_decay	-	-	5	212	8	0	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000219350	ENSMUSP00000151412	TRANSLATION	nonsense_mediated_decay	-	-	5	212	8	0	0	30.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000112858	Rnf212b	ENSMUST00000218311	ENSMUSP00000151344	TRANSLATION	protein_coding	-	-	5	297	8	0	1.5	30.5	0	-4,-5	-	-	11.184	PRINCIPAL:1
ENSMUSG00000112858	Rnf212b	ENSMUST00000220122	ENSMUSP00000151770	TRANSLATION	nonsense_mediated_decay	-	-	5	53	6	0	0	35.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000076861	Trav18	ENSMUST00000186573	ENSMUSP00000140810	TRANSLATION	TR_V_gene	stop	-	-	108	0	1	0	47.5	0	2,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076861	Trav18	ENSMUST00000103673	ENSMUSP00000100450	TRANSLATION	TR_V_gene	stop	-	-	109	0	1	0	47.5	0	2,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000092167	Gm3696	ENSMUST00000167923	ENSMUSP00000132868	TRANSLATION	protein_coding	-	CCDS49397.1	5	203	0	0	0.5	74.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000092167	Gm3696	ENSMUST00000179898	ENSMUSP00000137098	TRANSLATION	protein_coding	-	CCDS49397.1	5	203	0	0	0.5	74.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044772	Sntn	ENSMUST00000061045	ENSMUSP00000062092	TRANSLATION	protein_coding	-	CCDS26822.1	1	147	5	1.18	2.9	0	0	-4,-7	-	-	11	PRINCIPAL:1
ENSMUSG00000092165	Gm5624	ENSMUST00000178184	ENSMUSP00000136815	TRANSLATION	protein_coding	-	-	5	163	0	0	0	83.6	0	-4,-2	-	-	6	PRINCIPAL:5
ENSMUSG00000092165	Gm5624	ENSMUST00000226458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092165	Gm5624	ENSMUST00000228629	ENSMUSP00000153804	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000092165	Gm5624	ENSMUST00000227882	ENSMUSP00000154449	TRANSLATION	protein_coding	-	-	-	162	0	0	0	83.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000092165	Gm5624	ENSMUST00000165769	ENSMUSP00000126636	TRANSLATION	protein_coding	start	-	5	207	0	0	0	83.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096656	Trav12-2	ENSMUST00000180972	ENSMUSP00000137851	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	45.4	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076864	Trdv1	ENSMUST00000103676	ENSMUSP00000100453	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	51.6	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076864	Trdv1	ENSMUST00000187163	ENSMUSP00000139783	TRANSLATION	TR_V_gene	stop	-	-	111	0	1	0	51.6	0	1,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000160710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000239244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000160381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000163055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000161740	ENSMUSP00000124917	TRANSLATION	protein_coding	-	CCDS49418.1	1	351	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000162224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038925	E330034G19Rik	ENSMUST00000239268	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000076858	Trav3-4	ENSMUST00000103670	ENSMUSP00000100447	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	55.6	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000115022	Gm49387	ENSMUST00000167175	ENSMUSP00000128588	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	140	9	3.6	0	112.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021832	Psmc6	ENSMUST00000228026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021832	Psmc6	ENSMUST00000228479	ENSMUSP00000153924	TRANSLATION	nonsense_mediated_decay	start	-	-	45	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021832	Psmc6	ENSMUST00000226431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021832	Psmc6	ENSMUST00000227385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021832	Psmc6	ENSMUST00000227148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021832	Psmc6	ENSMUST00000228300	ENSMUSP00000153960	TRANSLATION	nonsense_mediated_decay	-	-	-	60	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021832	Psmc6	ENSMUST00000022380	ENSMUSP00000022380	TRANSLATION	protein_coding	-	CCDS26974.1	1	389	15	11.25	13.6	148.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021832	Psmc6	ENSMUST00000226739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021832	Psmc6	ENSMUST00000228870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021832	Psmc6	ENSMUST00000228831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096001	2610528A11Rik	ENSMUST00000191317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096001	2610528A11Rik	ENSMUST00000179488	ENSMUSP00000136426	TRANSLATION	protein_coding	-	CCDS56949.1	1	78	0	0	1.5	105.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000012405	Rpl15	ENSMUST00000112598	ENSMUSP00000108217	TRANSLATION	protein_coding	-	CCDS36812.1	1	204	0	2.64	21.5	326.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000012405	Rpl15	ENSMUST00000080281	ENSMUSP00000079163	TRANSLATION	protein_coding	-	CCDS36812.1	1	204	0	2.64	21.5	326.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000012405	Rpl15	ENSMUST00000147121	ENSMUSP00000119852	TRANSLATION	protein_coding	stop	-	5	107	0	1.64	0	168.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012405	Rpl15	ENSMUST00000079419	ENSMUSP00000078388	TRANSLATION	protein_coding	-	CCDS36812.1	2	204	0	2.64	21.5	326.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000012405	Rpl15	ENSMUST00000224196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012405	Rpl15	ENSMUST00000100799	ENSMUSP00000098362	TRANSLATION	protein_coding	-	CCDS36812.1	2	204	0	2.64	21.5	326.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000044461	Shisa2	ENSMUST00000053949	ENSMUSP00000059391	TRANSLATION	protein_coding	-	CCDS27173.1	1	295	0	1	3.9	193.8	0	2,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000044461	Shisa2	ENSMUST00000224155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091400	Gm6356	ENSMUST00000166618	ENSMUSP00000128748	TRANSLATION	protein_coding	-	-	5	188	0	0	0	79.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076879	Traj52	ENSMUST00000103691	ENSMUSP00000143288	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000094258	Gm8159	ENSMUST00000170546	ENSMUSP00000127748	TRANSLATION	protein_coding	-	-	5	267	0	0	0	73.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000094258	Gm8159	ENSMUST00000179231	ENSMUSP00000137635	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094258	Gm8159	ENSMUST00000163738	ENSMUSP00000126261	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021928	Ebpl	ENSMUST00000022494	ENSMUSP00000022494	TRANSLATION	protein_coding	-	CCDS27183.1	1	206	0	0	3.9	207	0	2,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000021928	Ebpl	ENSMUST00000223560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021928	Ebpl	ENSMUST00000225112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182760	ENSMUSP00000138125	TRANSLATION	protein_coding	-	-	5	1526	0	3.399	0	33.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004562	Arhgef40	ENSMUST00000182504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182338	ENSMUSP00000138482	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182412	ENSMUSP00000138405	TRANSLATION	nonsense_mediated_decay	start	-	3	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000183167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004562	Arhgef40	ENSMUST00000183213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000100639	ENSMUSP00000098204	TRANSLATION	protein_coding	-	CCDS49489.1	1	1476	0	3.399	0.5	33.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004562	Arhgef40	ENSMUST00000183208	ENSMUSP00000138354	TRANSLATION	nonsense_mediated_decay	-	-	5	500	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182217	ENSMUSP00000138568	TRANSLATION	protein_coding	start	-	5	115	0	0.264	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182909	ENSMUSP00000138635	TRANSLATION	protein_coding	-	CCDS49488.1	5	1517	0	3.399	1.5	33.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004562	Arhgef40	ENSMUST00000182905	ENSMUSP00000138797	TRANSLATION	nonsense_mediated_decay	-	-	1	1191	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000183022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182649	ENSMUSP00000138638	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182193	ENSMUSP00000138751	TRANSLATION	protein_coding	stop	-	5	89	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182667	ENSMUSP00000138424	TRANSLATION	protein_coding	start	-	3	179	0	0.864	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000182061	ENSMUSP00000138128	TRANSLATION	protein_coding	-	CCDS59616.1	1	1469	0	3.399	0.5	33.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000004562	Arhgef40	ENSMUST00000182644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004562	Arhgef40	ENSMUST00000182828	ENSMUSP00000138339	TRANSLATION	protein_coding	start	-	3	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004562	Arhgef40	ENSMUST00000093813	ENSMUSP00000091331	TRANSLATION	protein_coding	-	CCDS49488.1	1	1517	0	3.399	1.5	33.9	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000004562	Arhgef40	ENSMUST00000182931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000151751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000154533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000150047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000110894	ENSMUSP00000106519	TRANSLATION	protein_coding	-	CCDS36980.1	1	172	0	4.08	19.5	273.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060126	Tpt1	ENSMUST00000134040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060126	Tpt1	ENSMUST00000125146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000128889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060126	Tpt1	ENSMUST00000142061	ENSMUSP00000121225	TRANSLATION	protein_coding	-	-	5	138	0	3	2.4	210.8	0	-4,-5	-	-	6.4	MINOR
ENSMUSG00000079186	Gzmc	ENSMUST00000015585	ENSMUSP00000015585	TRANSLATION	protein_coding	-	CCDS27146.1	1	248	4	4	0.5	201.3	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000022217	Emc9	ENSMUST00000174352	ENSMUSP00000133463	TRANSLATION	protein_coding	start	-	3	97	0	0	0	68.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022217	Emc9	ENSMUST00000174618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022217	Emc9	ENSMUST00000022828	ENSMUSP00000022828	TRANSLATION	protein_coding	-	CCDS27117.1	1	206	0	0	7.5	191.5	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000022217	Emc9	ENSMUST00000173169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022101	Fgf17	ENSMUST00000022697	ENSMUSP00000022697	TRANSLATION	protein_coding	-	CCDS27260.1	1	216	7	3.53	7.6	137.7	0	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000022101	Fgf17	ENSMUST00000227123	ENSMUSP00000154684	TRANSLATION	protein_coding	-	-	-	205	7	3.2	5.4	137.7	0	4,-1	-	-	19.341	MINOR
ENSMUSG00000021770	Samd8	ENSMUST00000022292	ENSMUSP00000022292	TRANSLATION	protein_coding	-	CCDS26866.1	1	478	0	0	2.7	128.5	6	-4,0	-	-	6.79	MINOR
ENSMUSG00000021770	Samd8	ENSMUST00000119430	ENSMUSP00000112803	TRANSLATION	protein_coding	-	-	1	415	0	0	5.3	128.5	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000021770	Samd8	ENSMUST00000144061	ENSMUSP00000117603	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021770	Samd8	ENSMUST00000142023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058571	Gpc6	ENSMUST00000078849	ENSMUSP00000077893	TRANSLATION	protein_coding	-	CCDS27330.1	1	555	0	7.6	1.5	831.4	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000058571	Gpc6	ENSMUST00000125435	ENSMUSP00000120362	TRANSLATION	protein_coding	-	CCDS37008.1	1	565	0	7.6	1.5	815	0	3,-2	-	-	11.016	ALTERNATIVE:2
ENSMUSG00000058571	Gpc6	ENSMUST00000123239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058571	Gpc6	ENSMUST00000088483	ENSMUSP00000085835	TRANSLATION	protein_coding	-	CCDS27330.1	5	555	0	7.6	1.5	831.4	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000000958	Slc7a7	ENSMUST00000196966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000958	Slc7a7	ENSMUST00000228488	ENSMUSP00000154352	TRANSLATION	protein_coding	stop	-	-	209	0	1.7424	0	35.7	10	-4,-5	-	-	-1	MINOR
ENSMUSG00000000958	Slc7a7	ENSMUST00000200545	ENSMUSP00000142587	TRANSLATION	protein_coding	stop	-	3	186	0	1.1724	0	0	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000000958	Slc7a7	ENSMUST00000195970	ENSMUSP00000143091	TRANSLATION	protein_coding	-	CCDS27087.1	5	510	0	3.9924	5.1	90.2	16	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000958	Slc7a7	ENSMUST00000227334	ENSMUSP00000154208	TRANSLATION	protein_coding	stop	-	-	156	0	0.92	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000000958	Slc7a7	ENSMUST00000195999	ENSMUSP00000142826	TRANSLATION	protein_coding	stop	-	2	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000958	Slc7a7	ENSMUST00000196215	ENSMUSP00000142710	TRANSLATION	protein_coding	stop	-	3	59	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000000958	Slc7a7	ENSMUST00000197667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000958	Slc7a7	ENSMUST00000197440	ENSMUSP00000143743	TRANSLATION	protein_coding	-	CCDS27087.1	1	510	0	3.9924	5.1	90.2	16	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000958	Slc7a7	ENSMUST00000226753	ENSMUSP00000154533	TRANSLATION	protein_coding	-	CCDS27087.1	-	510	0	3.9924	5.1	90.2	16	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000958	Slc7a7	ENSMUST00000000984	ENSMUSP00000000984	TRANSLATION	protein_coding	-	CCDS27087.1	1	510	0	3.9924	5.1	90.2	16	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000958	Slc7a7	ENSMUST00000227967	ENSMUSP00000153917	TRANSLATION	protein_coding	stop	-	-	167	0	1.08	0	0	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000053093	Myh7	ENSMUST00000149852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053093	Myh7	ENSMUST00000168485	ENSMUSP00000126840	TRANSLATION	protein_coding	-	CCDS27106.1	1	1935	15	37.34	8.8	1593.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000053093	Myh7	ENSMUST00000227401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053093	Myh7	ENSMUST00000228837	ENSMUSP00000154569	TRANSLATION	protein_coding	stop	-	-	94	0	3.16	0	59.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053093	Myh7	ENSMUST00000227518	ENSMUSP00000154332	TRANSLATION	protein_coding	stop	-	-	87	0	2.83	0	59.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053093	Myh7	ENSMUST00000102803	ENSMUSP00000099867	TRANSLATION	protein_coding	-	CCDS27106.1	1	1935	15	37.34	8.8	1593.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000053093	Myh7	ENSMUST00000226424	ENSMUSP00000154631	TRANSLATION	protein_coding	stop	-	-	36	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053093	Myh7	ENSMUST00000153783	ENSMUSP00000116595	TRANSLATION	protein_coding	stop	-	2	60	0	1.75	0	39.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061356	Nuggc	ENSMUST00000079469	ENSMUSP00000078434	TRANSLATION	protein_coding	-	CCDS56966.1	5	812	8	0	0.5	50.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000061356	Nuggc	ENSMUST00000150897	ENSMUSP00000118402	TRANSLATION	protein_coding	-	-	5	796	8	0	3.9	50.6	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000093968	Gm8165	ENSMUST00000095981	ENSMUSP00000093679	TRANSLATION	protein_coding	start	-	5	213	0	0	0	86.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000076922	Traj6	ENSMUST00000103734	ENSMUSP00000142705	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072598	Ang6	ENSMUST00000096869	ENSMUSP00000094632	TRANSLATION	protein_coding	-	CCDS36889.1	-	147	5	1	1.5	112	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000072598	Ang6	ENSMUST00000160223	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000091718	Gm16506	ENSMUST00000165553	ENSMUSP00000129358	TRANSLATION	protein_coding	start	-	5	213	0	0	0	89.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000046523	Kctd4	ENSMUST00000050120	ENSMUSP00000061734	TRANSLATION	protein_coding	-	CCDS27282.1	1	259	0	0.4	12.8	65.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057564	Olfr1508	ENSMUST00000206520	ENSMUSP00000145649	TRANSLATION	protein_coding	-	CCDS27061.1	2	310	0	1.05	3.9	162.7	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000057564	Olfr1508	ENSMUST00000205811	ENSMUSP00000145829	TRANSLATION	protein_coding	stop	-	3	128	0	0.6	0	102.5	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000076903	Traj26	ENSMUST00000103715	ENSMUSP00000143580	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022122	Ednrb	ENSMUST00000172237	ENSMUSP00000126057	TRANSLATION	protein_coding	-	CCDS27317.1	1	442	0	5.8	5.1	133.2	7	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000022122	Ednrb	ENSMUST00000022718	ENSMUSP00000022718	TRANSLATION	protein_coding	-	CCDS27317.1	1	442	0	5.8	5.1	133.2	7	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000022122	Ednrb	ENSMUST00000227824	ENSMUSP00000154806	TRANSLATION	protein_coding	-	CCDS27317.1	-	442	0	5.8	5.1	133.2	7	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000076876	Traj57	ENSMUST00000103688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076876	Traj57	ENSMUST00000196977	ENSMUSP00000143782	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000015812	Gnrh1	ENSMUST00000223951	ENSMUSP00000153071	TRANSLATION	protein_coding	-	CCDS27231.1	-	90	0	0	5.1	23.1	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000015812	Gnrh1	ENSMUST00000223929	ENSMUSP00000153349	TRANSLATION	protein_coding	-	-	-	45	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000015812	Gnrh1	ENSMUST00000111095	ENSMUSP00000106724	TRANSLATION	protein_coding	-	CCDS27231.1	1	90	0	0	5.1	23.1	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000050961	AY358078	ENSMUST00000053821	ENSMUSP00000078129	TRANSLATION	protein_coding	-	CCDS49485.1	1	465	0	0	0.5	80.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000105080	Trav7n-6	ENSMUST00000178100	ENSMUSP00000136007	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	70.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021752	Kctd6	ENSMUST00000170111	ENSMUSP00000129059	TRANSLATION	protein_coding	-	CCDS26812.1	1	237	0	0.6	20.3	73.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021752	Kctd6	ENSMUST00000022272	ENSMUSP00000022272	TRANSLATION	protein_coding	-	CCDS26812.1	1	237	0	0.6	20.3	73.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000076795	Trav8d-2	ENSMUST00000198439	ENSMUSP00000142447	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	62.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076795	Trav8d-2	ENSMUST00000103605	ENSMUSP00000100382	TRANSLATION	TR_V_gene	stop	-	-	111	0	1	0	62.9	0	0,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022066	Entpd4b	ENSMUST00000185072	ENSMUSP00000139202	TRANSLATION	protein_coding	-	-	1	613	7	3.86	6.3	358.5	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022066	Entpd4b	ENSMUST00000185174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022066	Entpd4b	ENSMUST00000064846	ENSMUSP00000063726	TRANSLATION	protein_coding	-	-	1	102	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022066	Entpd4b	ENSMUST00000183906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022066	Entpd4b	ENSMUST00000184506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041028	Ghitm	ENSMUST00000224769	ENSMUSP00000153458	TRANSLATION	protein_coding	stop	-	-	198	0	0	0	0	4	-4,0	-	-	-1	MINOR
ENSMUSG00000041028	Ghitm	ENSMUST00000042564	ENSMUSP00000046212	TRANSLATION	protein_coding	-	CCDS26953.1	1	346	0	0	7.5	137	7	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000041028	Ghitm	ENSMUST00000165649	ENSMUSP00000129712	TRANSLATION	protein_coding	-	CCDS26953.1	1	346	0	0	7.5	137	7	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000041028	Ghitm	ENSMUST00000223921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014453	Blk	ENSMUST00000224965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014453	Blk	ENSMUST00000014597	ENSMUSP00000014597	TRANSLATION	protein_coding	-	CCDS27200.1	1	499	18	10	3.9	445.4	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000098557	Kctd12	ENSMUST00000183756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098557	Kctd12	ENSMUST00000184744	ENSMUSP00000139261	TRANSLATION	protein_coding	-	CCDS70611.1	-	327	0	0.6	8.8	56.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022229	Atp12a	ENSMUST00000225698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022229	Atp12a	ENSMUST00000007340	ENSMUSP00000007340	TRANSLATION	protein_coding	-	CCDS27148.1	1	1035	16	20.44	5.1	455	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045875	Adra1a	ENSMUST00000159365	ENSMUSP00000124322	TRANSLATION	protein_coding	-	CCDS70600.1	1	427	0	1.02	5.1	266	9	-4,-7	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000045875	Adra1a	ENSMUST00000225182	ENSMUSP00000153103	TRANSLATION	protein_coding	-	-	-	295	0	0.6	0.5	229.4	8	-4,-7	-	-	7.332	MINOR
ENSMUSG00000045875	Adra1a	ENSMUST00000054661	ENSMUSP00000053703	TRANSLATION	protein_coding	-	CCDS27223.1	1	466	0	1.02	6.3	266	9	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000045875	Adra1a	ENSMUST00000161339	ENSMUSP00000125354	TRANSLATION	protein_coding	-	CCDS27223.1	1	466	0	1.02	6.3	266	9	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000045875	Adra1a	ENSMUST00000160647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045875	Adra1a	ENSMUST00000159068	ENSMUSP00000124570	TRANSLATION	protein_coding	-	CCDS27223.1	2	466	0	1.02	6.3	266	9	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000022139	Mbnl2	ENSMUST00000226800	ENSMUSP00000154734	TRANSLATION	protein_coding	-	CCDS49568.1	-	355	16	3.6	14	52.3	0	-4,-6	-	-	21.716	ALTERNATIVE:1
ENSMUSG00000022139	Mbnl2	ENSMUST00000227644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022139	Mbnl2	ENSMUST00000227594	ENSMUSP00000154559	TRANSLATION	protein_coding	-	CCDS49567.1	-	373	16	3.6	15	52.3	0	-4,-6	-	-	22	ALTERNATIVE:1
ENSMUSG00000022139	Mbnl2	ENSMUST00000167459	ENSMUSP00000126186	TRANSLATION	protein_coding	-	-	1	385	16	3.6	14	52.3	0	-4,-6	-	-	21.716	ALTERNATIVE:1
ENSMUSG00000022139	Mbnl2	ENSMUST00000227508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022139	Mbnl2	ENSMUST00000227153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022139	Mbnl2	ENSMUST00000088419	ENSMUSP00000085763	TRANSLATION	protein_coding	-	CCDS49567.1	1	373	16	3.6	15	52.3	0	-4,-6	-	-	22	PRINCIPAL:3
ENSMUSG00000022139	Mbnl2	ENSMUST00000227484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022139	Mbnl2	ENSMUST00000228115	ENSMUSP00000154652	TRANSLATION	protein_coding	start/stop	-	-	253	8	1.6	0	31.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022139	Mbnl2	ENSMUST00000227012	ENSMUSP00000153973	TRANSLATION	protein_coding	-	CCDS49568.1	-	355	16	3.6	14	52.3	0	-4,-6	-	-	21.716	ALTERNATIVE:1
ENSMUSG00000076925	Traj3	ENSMUST00000103737	ENSMUSP00000143132	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072739	Gm10408	ENSMUST00000096168	ENSMUSP00000093882	TRANSLATION	protein_coding	-	CCDS56913.1	5	218	0	0	0.5	68.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039599	Fam149b	ENSMUST00000224930	ENSMUSP00000153235	TRANSLATION	protein_coding	-	-	-	305	0	0	0	90.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039599	Fam149b	ENSMUST00000225942	ENSMUSP00000153645	TRANSLATION	protein_coding	-	-	-	606	0	0	0	90.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039599	Fam149b	ENSMUST00000225114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039599	Fam149b	ENSMUST00000224670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039599	Fam149b	ENSMUST00000225834	ENSMUSP00000153160	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039599	Fam149b	ENSMUST00000224242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039599	Fam149b	ENSMUST00000037698	ENSMUSP00000045247	TRANSLATION	protein_coding	-	-	1	245	0	0	0	39.8	0	-4,-7	-	-	2.628	MINOR
ENSMUSG00000039599	Fam149b	ENSMUST00000051915	ENSMUSP00000056907	TRANSLATION	protein_coding	-	-	5	449	0	0	0	90.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039599	Fam149b	ENSMUST00000090503	ENSMUSP00000087989	TRANSLATION	protein_coding	-	CCDS49410.1	1	485	0	0	0.5	39.8	0	-4,-7	-	-	2.628	MINOR
ENSMUSG00000039599	Fam149b	ENSMUST00000224110	ENSMUSP00000153544	TRANSLATION	protein_coding	stop	-	-	102	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039599	Fam149b	ENSMUST00000224079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039599	Fam149b	ENSMUST00000225597	ENSMUSP00000153360	TRANSLATION	nonsense_mediated_decay	-	-	-	144	0	0	0	39.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039599	Fam149b	ENSMUST00000090499	ENSMUSP00000087985	TRANSLATION	protein_coding	-	CCDS49409.1	1	578	0	0	1.5	90.8	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000039599	Fam149b	ENSMUST00000225837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039599	Fam149b	ENSMUST00000223898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039599	Fam149b	ENSMUST00000224721	ENSMUSP00000153509	TRANSLATION	protein_coding	-	CCDS49408.1	-	338	0	0	0.5	90.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039599	Fam149b	ENSMUST00000225991	ENSMUSP00000153332	TRANSLATION	protein_coding	stop	-	-	203	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000076905	Traj24	ENSMUST00000103717	ENSMUSP00000142923	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000061524	Zic2	ENSMUST00000075888	ENSMUSP00000075283	TRANSLATION	protein_coding	-	CCDS27349.1	1	529	21	1.6	3.9	66.6	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000061524	Zic2	ENSMUST00000137059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096775	Gm5796	ENSMUST00000096184	ENSMUSP00000093898	TRANSLATION	protein_coding	-	CCDS49378.1	1	205	0	0	0.5	74.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044186	Nkx2-6	ENSMUST00000062437	ENSMUSP00000049898	TRANSLATION	protein_coding	-	CCDS56968.1	1	289	0	0.6	0.5	71	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022226	Mcpt2	ENSMUST00000015576	ENSMUSP00000015576	TRANSLATION	protein_coding	-	CCDS27139.1	1	244	11	4	0.5	201.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000104915	Trav15n-2	ENSMUST00000199112	ENSMUSP00000143056	TRANSLATION	TR_V_gene	stop	-	-	117	0	1	0	61.8	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000003469	Phyhip	ENSMUST00000159180	ENSMUSP00000125254	TRANSLATION	protein_coding	stop	-	3	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003469	Phyhip	ENSMUST00000003561	ENSMUSP00000003561	TRANSLATION	protein_coding	-	CCDS36971.1	1	330	0	0	12.8	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000096653	Trav15d-1-dv6d-1	ENSMUST00000103616	ENSMUSP00000100393	TRANSLATION	TR_V_gene	stop	-	-	124	0	1.3	0	53	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000096653	Trav15d-1-dv6d-1	ENSMUST00000186370	ENSMUSP00000141165	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.3	0	53	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076921	Traj7	ENSMUST00000103733	ENSMUSP00000143149	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022100	Xpo7	ENSMUST00000167242	ENSMUSP00000129504	TRANSLATION	protein_coding	-	-	5	1088	0	3.93	10.8	49.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000022100	Xpo7	ENSMUST00000226448	ENSMUSP00000153855	TRANSLATION	protein_coding	-	-	-	1057	0	3.93	0	49.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022100	Xpo7	ENSMUST00000022696	ENSMUSP00000022696	TRANSLATION	protein_coding	-	CCDS36974.1	1	1087	0	3.93	10.8	49.5	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000022100	Xpo7	ENSMUST00000227550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022100	Xpo7	ENSMUST00000228346	ENSMUSP00000154350	TRANSLATION	protein_coding	-	-	-	1088	0	3.93	6.6	49.5	0	-4,-5	-	-	13.713	MINOR
ENSMUSG00000022100	Xpo7	ENSMUST00000226607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063142	Kcnma1	ENSMUST00000163322	ENSMUSP00000128553	TRANSLATION	protein_coding	start	-	5	1053	4	24.06	0	195.2	16	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225471	ENSMUSP00000153083	TRANSLATION	protein_coding	start	-	-	1142	4	25.17	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000188991	ENSMUSP00000140751	TRANSLATION	protein_coding	-	CCDS79276.1	1	1236	4	24.75	1.7	199.5	24	-4,-5	-	-	14.926	ALTERNATIVE:2
ENSMUSG00000063142	Kcnma1	ENSMUST00000224077	ENSMUSP00000153214	TRANSLATION	protein_coding	-	-	-	1178	4	24.75	0	199.5	24	-4,-7	-	-	14.926	ALTERNATIVE:2
ENSMUSG00000063142	Kcnma1	ENSMUST00000223655	ENSMUSP00000153362	TRANSLATION	protein_coding	start	-	-	1175	4	24.75	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000179836	ENSMUSP00000137141	TRANSLATION	protein_coding	start/stop	-	5	1059	4	22.83	0	108.4	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000212542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063142	Kcnma1	ENSMUST00000223749	ENSMUSP00000153216	TRANSLATION	protein_coding	start	-	-	1113	4	25.08	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000223847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063142	Kcnma1	ENSMUST00000188210	ENSMUSP00000141069	TRANSLATION	protein_coding	start	-	1	1192	4	24.921	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000224468	ENSMUSP00000153312	TRANSLATION	protein_coding	-	-	-	1242	4	24.75	0.5	199.5	24	-4,-5	-	-	14.926	ALTERNATIVE:2
ENSMUSG00000063142	Kcnma1	ENSMUST00000223727	ENSMUSP00000153158	TRANSLATION	protein_coding	start	-	-	1112	4	24.75	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225315	ENSMUSP00000153584	TRANSLATION	protein_coding	start	-	-	1142	4	24.84	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000190339	ENSMUSP00000141143	TRANSLATION	protein_coding	-	-	5	191	0	0.56	0	0	4	-4,-5	-	-	0	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000212576	ENSMUSP00000148692	TRANSLATION	protein_coding	stop	-	5	332	0	7	0	54.4	12	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225556	ENSMUSP00000152959	TRANSLATION	protein_coding	start	-	-	1119	4	23.75	0	108.4	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000065788	ENSMUSP00000065293	TRANSLATION	protein_coding	start	-	5	1108	4	23.896	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000177634	ENSMUSP00000136447	TRANSLATION	protein_coding	start	-	5	1135	4	24.001	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000179097	ENSMUSP00000136568	TRANSLATION	protein_coding	start	-	5	1132	4	24.001	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000074983	ENSMUSP00000074511	TRANSLATION	protein_coding	start/stop	-	5	1107	4	23.83	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000224232	ENSMUSP00000153291	TRANSLATION	protein_coding	start	-	-	1171	4	25.08	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000172099	ENSMUSP00000132204	TRANSLATION	protein_coding	start/stop	-	5	1118	4	23.83	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225305	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063142	Kcnma1	ENSMUST00000224787	ENSMUSP00000152999	TRANSLATION	protein_coding	start	-	-	1115	4	23.706	0	199.4	22	-4,-5	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225794	ENSMUSP00000153254	TRANSLATION	nonsense_mediated_decay	start	-	-	357	0	7.92	0	67.7	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000224465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063142	Kcnma1	ENSMUST00000224025	ENSMUSP00000153078	TRANSLATION	protein_coding	start	-	-	1185	4	24.816	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000145596	ENSMUSP00000153247	TRANSLATION	protein_coding	-	CCDS79277.1	-	1209	4	24.855	1.7	199.5	24	-4,-5	-	-	15.136	ALTERNATIVE:2
ENSMUSG00000063142	Kcnma1	ENSMUST00000224285	ENSMUSP00000153316	TRANSLATION	protein_coding	start	-	-	1113	4	24.98	0	195.2	20	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000100831	ENSMUSP00000098393	TRANSLATION	protein_coding	start	-	5	1086	4	24.25	0	199.5	20	-4,-6	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000224812	ENSMUSP00000153527	TRANSLATION	protein_coding	start	-	-	1146	4	25.17	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000190985	ENSMUSP00000140154	TRANSLATION	nonsense_mediated_decay	-	-	1	634	0	15.75	0	203.4	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000225431	ENSMUSP00000153670	TRANSLATION	protein_coding	start	-	-	1165	4	24.816	0	199.5	24	-4,-7	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000226051	ENSMUSP00000153356	TRANSLATION	protein_coding	stop	-	-	477	0	13.5	0	113.8	20	-2,-5	-	-	-1	MINOR
ENSMUSG00000063142	Kcnma1	ENSMUST00000190044	ENSMUSP00000140033	TRANSLATION	protein_coding	-	CCDS79275.1	1	1178	4	24.75	1.7	199.5	24	-4,-5	-	-	14.926	ALTERNATIVE:2
ENSMUSG00000063142	Kcnma1	ENSMUST00000224933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063142	Kcnma1	ENSMUST00000188285	ENSMUSP00000140275	TRANSLATION	protein_coding	-	CCDS79278.1	1	1239	4	24.75	1.7	199.5	24	-4,-5	-	-	14.926	PRINCIPAL:4
ENSMUSG00000063142	Kcnma1	ENSMUST00000112423	ENSMUSP00000108042	TRANSLATION	protein_coding	start	-	5	1055	4	22.921	0	199.4	18	0,-3	-	-	-1	MINOR
ENSMUSG00000022095	Fam160b2	ENSMUST00000022690	ENSMUSP00000022690	TRANSLATION	protein_coding	-	CCDS49537.1	5	744	0	0	1.5	364.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000049532	Sall2	ENSMUST00000058326	ENSMUSP00000056401	TRANSLATION	protein_coding	-	CCDS27054.1	1	1004	26	0	1.5	80.6	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000049532	Sall2	ENSMUST00000135523	ENSMUSP00000154331	TRANSLATION	protein_coding	-	-	1	1002	26	0	1.5	80.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000063867	Olfr1511	ENSMUST00000078171	ENSMUSP00000077302	TRANSLATION	protein_coding	-	CCDS27057.1	-	318	0	0.16	1.5	169	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063867	Olfr1511	ENSMUST00000214168	ENSMUSP00000149479	TRANSLATION	protein_coding	-	CCDS27057.1	5	318	0	0.16	1.5	169	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000053253	Ndfip2	ENSMUST00000149781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053253	Ndfip2	ENSMUST00000181969	ENSMUSP00000137875	TRANSLATION	protein_coding	-	CCDS49560.2	1	338	0	0	2.7	26.3	2	-1,3	-	-	5.91	PRINCIPAL:1
ENSMUSG00000053253	Ndfip2	ENSMUST00000155351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053253	Ndfip2	ENSMUST00000127286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053253	Ndfip2	ENSMUST00000138283	ENSMUSP00000121854	TRANSLATION	protein_coding	start	-	1	312	0	0	0	26.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000053253	Ndfip2	ENSMUST00000149358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076900	Traj29	ENSMUST00000103712	ENSMUSP00000143317	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096055	Trav12n-1	ENSMUST00000103587	ENSMUSP00000100364	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	49.3	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096055	Trav12n-1	ENSMUST00000198682	ENSMUSP00000143191	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	49.3	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076826	Trav4-2	ENSMUST00000103637	ENSMUSP00000100414	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	45.7	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021771	Vdac2	ENSMUST00000022293	ENSMUSP00000022293	TRANSLATION	protein_coding	-	CCDS26867.1	1	295	0	7.08	1.5	281.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000021771	Vdac2	ENSMUST00000224373	ENSMUSP00000152916	TRANSLATION	protein_coding	stop	-	-	246	0	5.58	0	233	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021771	Vdac2	ENSMUST00000132364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021771	Vdac2	ENSMUST00000173456	ENSMUSP00000134023	TRANSLATION	protein_coding	-	-	5	283	0	7.08	2	281.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021771	Vdac2	ENSMUST00000142084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021771	Vdac2	ENSMUST00000130224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021771	Vdac2	ENSMUST00000152562	ENSMUSP00000123032	TRANSLATION	protein_coding	stop	-	3	75	0	2	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021771	Vdac2	ENSMUST00000147715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021771	Vdac2	ENSMUST00000172727	ENSMUSP00000133525	TRANSLATION	protein_coding	-	-	5	283	0	7.08	2	281.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021771	Vdac2	ENSMUST00000153320	ENSMUSP00000115560	TRANSLATION	protein_coding	stop	-	5	201	0	4.25	0	190.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076884	Traj46	ENSMUST00000103696	ENSMUSP00000143666	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000041068	4930596D02Rik	ENSMUST00000043266	ENSMUSP00000039186	TRANSLATION	protein_coding	-	CCDS49447.1	1	216	0	1	0.5	58.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094804	Gm21977	ENSMUST00000163725	ENSMUSP00000127377	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000094590	Gm10251	ENSMUST00000178788	ENSMUSP00000137375	TRANSLATION	protein_coding	-	-	5	127	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094590	Gm10251	ENSMUST00000181786	ENSMUSP00000137842	TRANSLATION	protein_coding	-	-	1	127	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095426	Trav6d-5	ENSMUST00000180687	ENSMUSP00000137877	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.4	0	49.5	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000091494	Gm3269	ENSMUST00000178137	ENSMUSP00000137595	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	66.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091494	Gm3269	ENSMUST00000166025	ENSMUSP00000132121	TRANSLATION	protein_coding	-	-	5	263	0	0	0	66.2	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000035078	Mtmr9	ENSMUST00000058679	ENSMUSP00000059894	TRANSLATION	protein_coding	-	CCDS27203.1	1	545	0	8.32	12.8	451.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000035078	Mtmr9	ENSMUST00000225449	ENSMUSP00000153682	TRANSLATION	protein_coding	start	-	-	139	0	1.9	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000091657	Gm3072	ENSMUST00000167712	ENSMUSP00000127174	TRANSLATION	protein_coding	start	-	5	209	0	0	0	86.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000104876	Trdc	ENSMUST00000196323	ENSMUSP00000142908	TRANSLATION	TR_C_gene	start	-	-	153	0	1.525	0	26.6	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000076824	Trav14n-3	ENSMUST00000103652	ENSMUSP00000100429	TRANSLATION	TR_V_gene	stop	-	-	120	0	1.066	0	68.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000076824	Trav14n-3	ENSMUST00000103635	ENSMUSP00000100412	TRANSLATION	TR_V_gene	start/stop	-	-	93	0	1	0	68.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000091882	Gm6337	ENSMUST00000177662	ENSMUSP00000136270	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	63.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091882	Gm6337	ENSMUST00000170613	ENSMUSP00000132544	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	63.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091882	Gm6337	ENSMUST00000168088	ENSMUSP00000128372	TRANSLATION	protein_coding	-	-	5	211	0	0	0	63.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000050030	Olfr728	ENSMUST00000051563	ENSMUSP00000052079	TRANSLATION	protein_coding	-	CCDS27004.1	-	311	0	0.3	8.8	145	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050030	Olfr728	ENSMUST00000216423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050030	Olfr728	ENSMUST00000213685	ENSMUSP00000149796	TRANSLATION	protein_coding	-	CCDS27004.1	5	311	0	0.3	8.8	145	6	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050030	Olfr728	ENSMUST00000214046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050030	Olfr728	ENSMUST00000215329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022089	Bin3	ENSMUST00000228049	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022089	Bin3	ENSMUST00000022680	ENSMUSP00000022680	TRANSLATION	protein_coding	-	CCDS27247.1	1	253	0	3.08	15.5	87.8	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000022089	Bin3	ENSMUST00000226385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022089	Bin3	ENSMUST00000228717	ENSMUSP00000154413	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022089	Bin3	ENSMUST00000227841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046168	Kcnrg	ENSMUST00000225582	ENSMUSP00000153429	TRANSLATION	protein_coding	-	-	-	191	0	0.6	0.5	63.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000046168	Kcnrg	ENSMUST00000051184	ENSMUSP00000055327	TRANSLATION	protein_coding	-	CCDS27187.1	1	264	0	0.6	1.5	63.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000035932	Olfr750	ENSMUST00000048478	ENSMUSP00000036596	TRANSLATION	protein_coding	-	CCDS27033.1	-	331	0	0.36	3.9	163.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000035932	Olfr750	ENSMUST00000216202	ENSMUSP00000150180	TRANSLATION	protein_coding	-	CCDS27033.1	5	331	0	0.36	3.9	163.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000109649	Gm45521	ENSMUST00000211339	ENSMUSP00000147554	TRANSLATION	protein_coding	-	-	5	198	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000058126	Tpm3-rs7	ENSMUST00000072359	ENSMUSP00000072197	TRANSLATION	protein_coding	-	-	-	248	0	1	10.8	290.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034205	Loxl2	ENSMUST00000100420	ENSMUSP00000097987	TRANSLATION	protein_coding	-	CCDS27241.1	1	776	0	4.5	5.1	659.2	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000034205	Loxl2	ENSMUST00000022660	ENSMUSP00000022660	TRANSLATION	protein_coding	-	CCDS27241.1	1	776	0	4.5	5.1	659.2	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055639	Dach1	ENSMUST00000069334	ENSMUSP00000064970	TRANSLATION	protein_coding	-	CCDS36993.1	1	699	0	0.8	0.5	132	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000055639	Dach1	ENSMUST00000156684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055639	Dach1	ENSMUST00000071533	ENSMUSP00000071464	TRANSLATION	protein_coding	-	CCDS36994.1	1	751	0	0.8	0.5	132	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000047153	Khnyn	ENSMUST00000227462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047153	Khnyn	ENSMUST00000022831	ENSMUSP00000022831	TRANSLATION	protein_coding	-	CCDS27134.1	1	671	0	4.7	0.5	208.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047153	Khnyn	ENSMUST00000228462	ENSMUSP00000153796	TRANSLATION	nonsense_mediated_decay	-	-	-	555	0	2.7	0	169.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000078127	Fam170b	ENSMUST00000104926	ENSMUSP00000100529	TRANSLATION	protein_coding	-	CCDS49439.1	2	378	3	0	0.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000078127	Fam170b	ENSMUST00000227787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076899	Traj30	ENSMUST00000103711	ENSMUSP00000142450	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000002320	Tm9sf1	ENSMUST00000133707	ENSMUSP00000123471	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	47.8	0	0,-3	-	-	-1	MINOR
ENSMUSG00000002320	Tm9sf1	ENSMUST00000122358	ENSMUSP00000113782	TRANSLATION	protein_coding	-	CCDS27122.1	1	606	0	0	7.5	527.9	10	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000002320	Tm9sf1	ENSMUST00000130167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002320	Tm9sf1	ENSMUST00000121791	ENSMUSP00000112764	TRANSLATION	protein_coding	-	CCDS27122.1	5	606	0	0	7.5	527.9	10	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000002320	Tm9sf1	ENSMUST00000138085	ENSMUSP00000119435	TRANSLATION	protein_coding	stop	-	3	172	0	0	0	89.6	0	0,-3	-	-	-1	MINOR
ENSMUSG00000002320	Tm9sf1	ENSMUST00000120041	ENSMUSP00000112893	TRANSLATION	protein_coding	-	CCDS27122.1	5	606	0	0	7.5	527.9	10	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000002320	Tm9sf1	ENSMUST00000132338	ENSMUSP00000118427	TRANSLATION	protein_coding	stop	-	5	484	0	0	0	396.2	7	0,-3	-	-	-1	MINOR
ENSMUSG00000002320	Tm9sf1	ENSMUST00000121937	ENSMUSP00000113143	TRANSLATION	protein_coding	-	-	5	589	0	0	1	469.7	9	0,-3	-	-	2.508	MINOR
ENSMUSG00000002320	Tm9sf1	ENSMUST00000127473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002320	Tm9sf1	ENSMUST00000139313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002320	Tm9sf1	ENSMUST00000002391	ENSMUSP00000002391	TRANSLATION	protein_coding	-	CCDS27122.1	1	606	0	0	7.5	527.9	10	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000002320	Tm9sf1	ENSMUST00000149726	ENSMUSP00000115403	TRANSLATION	nonsense_mediated_decay	-	-	5	417	0	0	0	282	5	0,-3	-	-	-1	MINOR
ENSMUSG00000002320	Tm9sf1	ENSMUST00000146588	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042567	Nek10	ENSMUST00000112631	ENSMUSP00000108250	TRANSLATION	protein_coding	-	-	5	1111	20	5.895	0	200.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000042567	Nek10	ENSMUST00000063220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042567	Nek10	ENSMUST00000224491	ENSMUSP00000153142	TRANSLATION	protein_coding	-	CCDS56937.1	-	1115	20	5.895	4	200.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000042567	Nek10	ENSMUST00000134866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042567	Nek10	ENSMUST00000136826	ENSMUSP00000123151	TRANSLATION	nonsense_mediated_decay	start	-	5	279	0	1.845	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042567	Nek10	ENSMUST00000112630	ENSMUSP00000108249	TRANSLATION	protein_coding	-	CCDS56937.1	5	1115	20	5.895	4	200.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000079265	Gm8257	ENSMUST00000111860	ENSMUSP00000107491	TRANSLATION	protein_coding	-	-	5	228	0	0	0	84.9	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079265	Gm8257	ENSMUST00000179215	ENSMUSP00000136936	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	84.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079265	Gm8257	ENSMUST00000227585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079265	Gm8257	ENSMUST00000169583	ENSMUSP00000128723	TRANSLATION	protein_coding	-	-	5	264	0	0	0	84.9	1	-4,-7	-	-	6	PRINCIPAL:5
ENSMUSG00000079371	Gm3476	ENSMUST00000112742	ENSMUSP00000108362	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	69.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079371	Gm3476	ENSMUST00000167913	ENSMUSP00000126875	TRANSLATION	protein_coding	-	-	5	257	0	0	0	69.8	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000079371	Gm3476	ENSMUST00000190582	ENSMUSP00000141154	TRANSLATION	protein_coding	stop	-	5	204	0	0	0.5	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022096	Hr	ENSMUST00000161468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022096	Hr	ENSMUST00000161069	ENSMUSP00000124816	TRANSLATION	protein_coding	-	CCDS27257.1	1	1182	0	5.28	0.5	31.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000022096	Hr	ENSMUST00000159959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022096	Hr	ENSMUST00000163060	ENSMUSP00000124042	TRANSLATION	protein_coding	-	-	5	1211	0	5.28	0	31.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022096	Hr	ENSMUST00000022691	ENSMUSP00000022691	TRANSLATION	protein_coding	-	CCDS27257.1	1	1182	0	5.28	0.5	31.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000091698	Gm6526	ENSMUST00000100643	ENSMUSP00000098208	TRANSLATION	protein_coding	-	-	5	198	0	0	0.5	82	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000091698	Gm6526	ENSMUST00000179860	ENSMUSP00000136216	TRANSLATION	protein_coding	start/stop	-	5	197	0	0	0.5	82	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033885	Pxk	ENSMUST00000225827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033885	Pxk	ENSMUST00000225616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033885	Pxk	ENSMUST00000036682	ENSMUSP00000035265	TRANSLATION	protein_coding	-	-	1	581	0	4.95	5.1	129.6	0	-4,-6	-	-	13.893	ALTERNATIVE:1
ENSMUSG00000033885	Pxk	ENSMUST00000112689	ENSMUSP00000108309	TRANSLATION	protein_coding	-	CCDS36799.1	1	515	0	4.95	7.5	100.4	0	-4,-6	-	-	13.248	ALTERNATIVE:1
ENSMUSG00000033885	Pxk	ENSMUST00000225653	ENSMUSP00000152987	TRANSLATION	protein_coding	-	CCDS26810.1	-	582	0	4.95	3.9	129.6	0	-4,-6	-	-	13.338	PRINCIPAL:3
ENSMUSG00000033885	Pxk	ENSMUST00000224462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052435	Cebpe	ENSMUST00000064290	ENSMUSP00000068927	TRANSLATION	protein_coding	-	CCDS27100.1	1	281	0	1.2	7.6	57.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025544	Tm9sf2	ENSMUST00000171318	ENSMUSP00000131227	TRANSLATION	protein_coding	-	-	5	497	0	0	0	542	11	1,-3	-	-	0	MINOR
ENSMUSG00000025544	Tm9sf2	ENSMUST00000026624	ENSMUSP00000026624	TRANSLATION	protein_coding	-	CCDS27345.1	1	662	0	0	5.1	707.6	11	1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000025544	Tm9sf2	ENSMUST00000170007	ENSMUSP00000128894	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000093801	Trav14n-2	ENSMUST00000103623	ENSMUSP00000100400	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	63.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093801	Trav14n-2	ENSMUST00000197614	ENSMUSP00000143134	TRANSLATION	TR_V_gene	stop	-	-	121	0	1	0	63.3	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000091131	Gm7945	ENSMUST00000164948	ENSMUSP00000130156	TRANSLATION	protein_coding	start	-	5	236	0	0	0	86.1	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000046908	Ltb4r1	ENSMUST00000057569	ENSMUSP00000051368	TRANSLATION	protein_coding	-	CCDS27129.1	1	351	0	0.48	1.7	145.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000071262	Zfp957	ENSMUST00000040802	ENSMUSP00000039470	TRANSLATION	protein_coding	-	CCDS49551.1	1	567	7	0	0.5	38.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071262	Zfp957	ENSMUST00000161649	ENSMUSP00000124930	TRANSLATION	protein_coding	-	CCDS49551.1	5	567	7	0	0.5	38.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071262	Zfp957	ENSMUST00000162937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022218	Tgm1	ENSMUST00000227958	ENSMUSP00000154784	TRANSLATION	protein_coding	stop	-	-	164	0	1.25	0	53.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022218	Tgm1	ENSMUST00000002389	ENSMUSP00000002389	TRANSLATION	protein_coding	-	CCDS36932.1	1	815	10	12.4	0.5	293.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022218	Tgm1	ENSMUST00000228123	ENSMUSP00000154744	TRANSLATION	protein_coding	stop	-	-	116	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022218	Tgm1	ENSMUST00000168729	ENSMUSP00000128090	TRANSLATION	protein_coding	-	CCDS36932.1	5	815	10	12.4	0.5	293.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022218	Tgm1	ENSMUST00000178034	ENSMUSP00000137642	TRANSLATION	protein_coding	-	CCDS36932.1	1	815	10	12.4	0.5	293.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022218	Tgm1	ENSMUST00000226907	ENSMUSP00000154239	TRANSLATION	protein_coding	stop	-	-	167	0	1.45	0	55.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090404	Gm8362	ENSMUST00000168790	ENSMUSP00000128839	TRANSLATION	protein_coding	-	-	5	257	0	0	0	68.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000090404	Gm8362	ENSMUST00000170673	ENSMUSP00000131018	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	68.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021806	Nid2	ENSMUST00000224263	ENSMUSP00000153102	TRANSLATION	protein_coding	start	-	-	1171	13	11.84	0	519.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021806	Nid2	ENSMUST00000022340	ENSMUSP00000022340	TRANSLATION	protein_coding	-	CCDS36813.1	1	1403	13	12.34	0.5	596.8	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000021806	Nid2	ENSMUST00000224057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021806	Nid2	ENSMUST00000225791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022203	Efs	ENSMUST00000022813	ENSMUSP00000022813	TRANSLATION	protein_coding	-	CCDS36925.1	1	560	0	2.742	1.5	239.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022203	Efs	ENSMUST00000227037	ENSMUSP00000154657	TRANSLATION	protein_coding	-	-	-	467	0	0.992	0	165.3	0	-4,-7	-	-	3.708	MINOR
ENSMUSG00000022203	Efs	ENSMUST00000227587	ENSMUSP00000154047	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	0.882	0	25.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094954	Gm8011	ENSMUST00000172163	ENSMUSP00000128769	TRANSLATION	protein_coding	start	-	5	207	0	0	0	84.3	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021786	Oxsm	ENSMUST00000112624	ENSMUSP00000108243	TRANSLATION	protein_coding	-	CCDS26831.1	1	459	6	2	2.7	328.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021786	Oxsm	ENSMUST00000148121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021786	Oxsm	ENSMUST00000022311	ENSMUSP00000022311	TRANSLATION	protein_coding	-	CCDS26831.1	1	459	6	2	2.7	328.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021786	Oxsm	ENSMUST00000112625	ENSMUSP00000108244	TRANSLATION	protein_coding	-	CCDS26831.1	1	459	6	2	2.7	328.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000095226	Gm10377	ENSMUST00000100695	ENSMUSP00000098260	TRANSLATION	protein_coding	-	CCDS56950.1	1	184	0	0	0.5	63.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000093939	Trav4d-3	ENSMUST00000103592	ENSMUSP00000100369	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	46.7	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000096039	D830030K20Rik	ENSMUST00000223972	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096039	D830030K20Rik	ENSMUST00000178670	ENSMUSP00000137168	TRANSLATION	protein_coding	-	CCDS36793.1	1	146	0	0	0.5	48.4	0	-4,-5	-	-	4.122	MINOR
ENSMUSG00000096039	D830030K20Rik	ENSMUST00000225885	ENSMUSP00000153088	TRANSLATION	protein_coding	-	CCDS36793.1	-	146	0	0	0.5	48.4	0	-4,-5	-	-	4.122	MINOR
ENSMUSG00000096039	D830030K20Rik	ENSMUST00000112797	ENSMUSP00000108417	TRANSLATION	protein_coding	-	-	1	218	0	0	0.5	70.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072575	Eddm3b	ENSMUST00000100645	ENSMUSP00000098210	TRANSLATION	protein_coding	-	CCDS27036.1	1	149	0	0	0.5	28.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000093898	Gm3629	ENSMUST00000171706	ENSMUSP00000128655	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	74.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006288	Ttc5	ENSMUST00000227934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006288	Ttc5	ENSMUST00000227327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006288	Ttc5	ENSMUST00000227751	ENSMUSP00000154085	TRANSLATION	nonsense_mediated_decay	start	-	-	75	0	1.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006288	Ttc5	ENSMUST00000006451	ENSMUSP00000006451	TRANSLATION	protein_coding	-	CCDS36905.1	1	440	0	9.99	7.6	137.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006288	Ttc5	ENSMUST00000226768	ENSMUSP00000154412	TRANSLATION	protein_coding	-	-	-	185	0	3.5	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000006288	Ttc5	ENSMUST00000228440	ENSMUSP00000154731	TRANSLATION	nonsense_mediated_decay	-	-	-	195	0	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090707	Gm8237	ENSMUST00000178594	ENSMUSP00000136613	TRANSLATION	protein_coding	-	-	1	148	0	0	0.5	69.3	0	-4,-5	-	-	5.538	PRINCIPAL:3
ENSMUSG00000090707	Gm8237	ENSMUST00000164484	ENSMUSP00000127555	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	75.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000076923	Traj5	ENSMUST00000103735	ENSMUSP00000143114	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000041673	Lrrc18	ENSMUST00000120866	ENSMUSP00000113608	TRANSLATION	protein_coding	-	CCDS49440.1	1	255	0	1.88	0.5	40.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041673	Lrrc18	ENSMUST00000038956	ENSMUSP00000041199	TRANSLATION	protein_coding	-	CCDS26924.1	1	262	0	1.88	1.7	40.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041673	Lrrc18	ENSMUST00000120588	ENSMUSP00000113825	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041673	Lrrc18	ENSMUST00000123910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041673	Lrrc18	ENSMUST00000120951	ENSMUSP00000113965	TRANSLATION	protein_coding	-	-	5	309	0	1.88	0	40.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041673	Lrrc18	ENSMUST00000123822	ENSMUSP00000123178	TRANSLATION	protein_coding	stop	-	5	111	0	1.6	0	40.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022124	Fbxl3	ENSMUST00000127113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022124	Fbxl3	ENSMUST00000123043	ENSMUSP00000117701	TRANSLATION	protein_coding	stop	-	5	116	0	2.33	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022124	Fbxl3	ENSMUST00000022720	ENSMUSP00000022720	TRANSLATION	protein_coding	-	CCDS27315.1	1	428	0	5.83	7.5	32.7	0	-4,-5	-	-	14.67	PRINCIPAL:1
ENSMUSG00000022124	Fbxl3	ENSMUST00000144141	ENSMUSP00000120691	TRANSLATION	protein_coding	stop	-	3	177	0	3.83	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022124	Fbxl3	ENSMUST00000132004	ENSMUSP00000115843	TRANSLATION	protein_coding	-	CCDS84159.1	1	380	0	4.83	0.5	27	0	-4,-5	-	-	8.682	MINOR
ENSMUSG00000022124	Fbxl3	ENSMUST00000145693	ENSMUSP00000116044	TRANSLATION	protein_coding	-	CCDS27315.1	1	428	0	5.83	7.5	32.7	0	-4,-5	-	-	14.67	PRINCIPAL:1
ENSMUSG00000022124	Fbxl3	ENSMUST00000226952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021959	Lats2	ENSMUST00000022531	ENSMUSP00000022531	TRANSLATION	protein_coding	-	CCDS27158.1	1	1042	20	5.66	1.5	202.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000021959	Lats2	ENSMUST00000174213	ENSMUSP00000134321	TRANSLATION	nonsense_mediated_decay	-	-	1	119	0	0.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000173990	ENSMUSP00000133976	TRANSLATION	protein_coding	-	-	1	895	20	5.02	0	188	0	-4,-2	-	-	15.846	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000173077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021959	Lats2	ENSMUST00000077981	ENSMUSP00000077130	TRANSLATION	protein_coding	-	CCDS49508.1	1	176	0	0.8	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000174166	ENSMUSP00000133379	TRANSLATION	protein_coding	stop	-	5	114	0	0.8	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000173732	ENSMUSP00000133857	TRANSLATION	protein_coding	stop	-	3	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000038381	ENSMUSP00000038982	TRANSLATION	protein_coding	-	-	1	225	0	0.8	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000021959	Lats2	ENSMUST00000173964	ENSMUSP00000134142	TRANSLATION	protein_coding	start/stop	-	3	288	9	1.42	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090716	Gm3371	ENSMUST00000177827	ENSMUSP00000136656	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	80.6	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000090716	Gm3371	ENSMUST00000172103	ENSMUSP00000130896	TRANSLATION	protein_coding	start	-	5	167	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000041479	Syt15	ENSMUST00000119693	ENSMUSP00000113725	TRANSLATION	protein_coding	-	CCDS49444.1	1	389	0	3.5	0.5	85.2	1	-2,-5	-	-	10.962	MINOR
ENSMUSG00000041479	Syt15	ENSMUST00000035351	ENSMUSP00000036755	TRANSLATION	protein_coding	-	CCDS26934.1	1	418	0	3.84	1.5	90.6	1	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041479	Syt15	ENSMUST00000147298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021774	Ube2e1	ENSMUST00000022296	ENSMUSP00000022296	TRANSLATION	protein_coding	-	CCDS26837.1	1	193	0	5.08	11.5	158.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000021774	Ube2e1	ENSMUST00000225612	ENSMUSP00000153693	TRANSLATION	protein_coding	stop	-	-	148	0	3.75	0	157.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021774	Ube2e1	ENSMUST00000161580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021774	Ube2e1	ENSMUST00000162831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021774	Ube2e1	ENSMUST00000160266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079261	Gm15217	ENSMUST00000111826	ENSMUSP00000107457	TRANSLATION	protein_coding	-	-	2	155	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:5
ENSMUSG00000079261	Gm15217	ENSMUST00000147092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079261	Gm15217	ENSMUST00000141358	ENSMUSP00000154308	TRANSLATION	protein_coding	-	-	5	72	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000033166	Dis3	ENSMUST00000228449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033166	Dis3	ENSMUST00000228756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033166	Dis3	ENSMUST00000228643	ENSMUSP00000154479	TRANSLATION	nonsense_mediated_decay	-	-	-	566	4	9.098	0	173.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033166	Dis3	ENSMUST00000227001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033166	Dis3	ENSMUST00000227022	ENSMUSP00000154489	TRANSLATION	nonsense_mediated_decay	-	-	-	116	3	0.56	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033166	Dis3	ENSMUST00000042471	ENSMUSP00000041906	TRANSLATION	protein_coding	-	CCDS49555.1	5	958	4	15.81	1.5	402.8	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000048080	Olfr731	ENSMUST00000214152	ENSMUSP00000149395	TRANSLATION	protein_coding	-	CCDS27007.1	5	326	0	0.2	1.5	169.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048080	Olfr731	ENSMUST00000213322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048080	Olfr731	ENSMUST00000214388	ENSMUSP00000150683	TRANSLATION	protein_coding	-	CCDS27007.1	5	326	0	0.2	1.5	169.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048080	Olfr731	ENSMUST00000059565	ENSMUSP00000050705	TRANSLATION	protein_coding	-	CCDS27007.1	-	326	0	0.2	1.5	169.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000034913	Cby2	ENSMUST00000165569	ENSMUSP00000131347	TRANSLATION	protein_coding	-	CCDS49541.1	1	368	0	0	1.5	45.4	0	-4,-2	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000034913	Cby2	ENSMUST00000035243	ENSMUSP00000046259	TRANSLATION	protein_coding	-	CCDS27279.1	1	410	0	0	2.7	45.3	0	-4,-6	-	-	6.574	PRINCIPAL:3
ENSMUSG00000034913	Cby2	ENSMUST00000164082	ENSMUSP00000127439	TRANSLATION	protein_coding	-	CCDS49543.1	2	446	0	0	3.9	45.3	0	-4,-5	-	-	6.988	ALTERNATIVE:2
ENSMUSG00000034913	Cby2	ENSMUST00000169658	ENSMUSP00000129616	TRANSLATION	protein_coding	-	CCDS49542.1	3	419	0	0	2.9	45.3	0	-4,-5	-	-	6.643	ALTERNATIVE:2
ENSMUSG00000034913	Cby2	ENSMUST00000226623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095518	Gm8068	ENSMUST00000167440	ENSMUSP00000127822	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000021876	Rnase4	ENSMUST00000022428	ENSMUSP00000022428	TRANSLATION	protein_coding	-	CCDS27035.1	1	148	5	1	6.3	138.5	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000021876	Rnase4	ENSMUST00000169895	ENSMUSP00000127274	TRANSLATION	protein_coding	-	CCDS27035.1	1	148	5	1	6.3	138.5	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000093915	Trav12n-3	ENSMUST00000179583	ENSMUSP00000137319	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	44.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076926	Traj2	ENSMUST00000103738	ENSMUSP00000142337	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000055717	Slain1	ENSMUST00000160805	ENSMUSP00000125128	TRANSLATION	protein_coding	start	-	5	532	0	0	0	571	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055717	Slain1	ENSMUST00000162818	ENSMUSP00000123742	TRANSLATION	protein_coding	start/stop	-	3	214	0	0	0	239.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055717	Slain1	ENSMUST00000159456	ENSMUSP00000125685	TRANSLATION	protein_coding	start	-	5	420	0	0	0	459.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055717	Slain1	ENSMUST00000069443	ENSMUSP00000070592	TRANSLATION	protein_coding	-	CCDS27316.1	1	579	0	0	0.5	452.1	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000040618	Pck2	ENSMUST00000228921	ENSMUSP00000154072	TRANSLATION	nonsense_mediated_decay	start	-	-	108	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040618	Pck2	ENSMUST00000226664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040618	Pck2	ENSMUST00000228283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040618	Pck2	ENSMUST00000226231	ENSMUSP00000154015	TRANSLATION	protein_coding	start/stop	-	-	160	7	2.96	0	37.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040618	Pck2	ENSMUST00000226270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040618	Pck2	ENSMUST00000048781	ENSMUSP00000038555	TRANSLATION	protein_coding	-	CCDS27114.1	1	667	36	12.08	0.5	563.8	0	-4,0	-	-	18	MINOR
ENSMUSG00000040618	Pck2	ENSMUST00000226295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040618	Pck2	ENSMUST00000226519	ENSMUSP00000153733	TRANSLATION	protein_coding	-	-	-	640	36	12.08	7	563.8	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000040618	Pck2	ENSMUST00000226650	ENSMUSP00000154245	TRANSLATION	protein_coding	start	-	-	599	35	11.08	0	486.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000040618	Pck2	ENSMUST00000226352	ENSMUSP00000154762	TRANSLATION	protein_coding	-	-	-	609	36	11.08	0	542.5	0	-4,0	-	-	14.724	MINOR
ENSMUSG00000040618	Pck2	ENSMUST00000226514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040618	Pck2	ENSMUST00000226770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040618	Pck2	ENSMUST00000228240	ENSMUSP00000154736	TRANSLATION	protein_coding	start	-	-	489	29	9.75	0	359.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000095862	Trav6-6	ENSMUST00000103584	ENSMUSP00000100361	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	47.8	0	1,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000075572	Defb43	ENSMUST00000100491	ENSMUSP00000098060	TRANSLATION	protein_coding	-	CCDS36946.1	1	69	0	0	3.9	33.5	0	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000022015	Tnfsf11	ENSMUST00000022592	ENSMUSP00000022592	TRANSLATION	protein_coding	-	CCDS27294.1	1	316	0	2	1.5	122.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095975	Cphx1	ENSMUST00000184016	ENSMUSP00000139237	TRANSLATION	protein_coding	-	CCDS26877.1	1	182	0	1.2	0.5	49.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095975	Cphx1	ENSMUST00000061593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095975	Cphx1	ENSMUST00000183557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095975	Cphx1	ENSMUST00000183436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022044	Stmn4	ENSMUST00000152093	ENSMUSP00000117000	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022044	Stmn4	ENSMUST00000123435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022044	Stmn4	ENSMUST00000136192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022044	Stmn4	ENSMUST00000147477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022044	Stmn4	ENSMUST00000134440	ENSMUSP00000123092	TRANSLATION	protein_coding	stop	-	2	81	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022044	Stmn4	ENSMUST00000118426	ENSMUSP00000113629	TRANSLATION	protein_coding	-	CCDS79340.1	1	176	0	2.532	8.8	182.3	0	-4,-6	-	-	12.884	MINOR
ENSMUSG00000022044	Stmn4	ENSMUST00000121955	ENSMUSP00000113788	TRANSLATION	protein_coding	-	-	5	203	0	2.532	7.5	182.3	0	-4,-6	-	-	12.452	MINOR
ENSMUSG00000022044	Stmn4	ENSMUST00000120229	ENSMUSP00000113759	TRANSLATION	protein_coding	-	CCDS79339.1	2	216	0	2.9	7.5	198.2	0	-4,-6	-	-	14.168	MINOR
ENSMUSG00000022044	Stmn4	ENSMUST00000074523	ENSMUSP00000074113	TRANSLATION	protein_coding	-	CCDS27222.1	1	189	0	2.9	13	198.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000095560	Trav14d-2	ENSMUST00000196802	ENSMUSP00000142348	TRANSLATION	TR_V_gene	stop	-	-	121	0	1	0	63.3	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000095560	Trav14d-2	ENSMUST00000103597	ENSMUSP00000100374	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	63.3	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022225	Cma1	ENSMUST00000022834	ENSMUSP00000022834	TRANSLATION	protein_coding	-	CCDS27135.1	1	260	10	4.315	0.5	180.8	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000022225	Cma1	ENSMUST00000226280	ENSMUSP00000154406	TRANSLATION	protein_coding	-	-	-	247	10	4.315	0	180.8	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000093945	Gm3543	ENSMUST00000111870	ENSMUSP00000107501	TRANSLATION	protein_coding	-	-	3	184	0	0	0.5	68.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000093945	Gm3543	ENSMUST00000179947	ENSMUSP00000136563	TRANSLATION	protein_coding	start/stop	-	5	77	0	0	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000197	Nalcn	ENSMUST00000000201	ENSMUSP00000000201	TRANSLATION	protein_coding	-	CCDS37023.1	5	1739	0	11.755	15.8	474.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000000197	Nalcn	ENSMUST00000227818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000197	Nalcn	ENSMUST00000227541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000197	Nalcn	ENSMUST00000228860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000197	Nalcn	ENSMUST00000228766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000197	Nalcn	ENSMUST00000226617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000197	Nalcn	ENSMUST00000228789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006289	Osgep	ENSMUST00000162177	ENSMUSP00000124016	TRANSLATION	protein_coding	-	-	1	254	18	6.075	0	224.1	0	0,-5	-	-	9.072	MINOR
ENSMUSG00000006289	Osgep	ENSMUST00000160375	ENSMUSP00000124099	TRANSLATION	protein_coding	stop	-	5	156	12	3.225	0	147.9	0	0,-5	-	-	-1	MINOR
ENSMUSG00000006289	Osgep	ENSMUST00000160890	ENSMUSP00000124659	TRANSLATION	nonsense_mediated_decay	-	-	2	80	1	2	0	45.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006289	Osgep	ENSMUST00000160464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006289	Osgep	ENSMUST00000160393	ENSMUSP00000125155	TRANSLATION	nonsense_mediated_decay	-	-	1	335	19	8.075	15.3	295.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000006289	Osgep	ENSMUST00000162850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006289	Osgep	ENSMUST00000159292	ENSMUSP00000124039	TRANSLATION	protein_coding	-	CCDS27026.1	1	335	19	8.075	15.3	295.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000006289	Osgep	ENSMUST00000006452	ENSMUSP00000006452	TRANSLATION	nonsense_mediated_decay	-	-	5	186	13	4.25	0	178	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021952	Xpo4	ENSMUST00000172647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021952	Xpo4	ENSMUST00000174152	ENSMUSP00000133497	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021952	Xpo4	ENSMUST00000173172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021952	Xpo4	ENSMUST00000173638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021952	Xpo4	ENSMUST00000089482	ENSMUSP00000086909	TRANSLATION	protein_coding	-	-	5	1151	0	20.55	11	21.5	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000021952	Xpo4	ENSMUST00000173940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021952	Xpo4	ENSMUST00000172539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021952	Xpo4	ENSMUST00000172524	ENSMUSP00000134219	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021952	Xpo4	ENSMUST00000174545	ENSMUSP00000133280	TRANSLATION	protein_coding	-	CCDS56961.1	1	1151	0	20.35	11	21.5	0	-4,-5	-	-	14.598	PRINCIPAL:2
ENSMUSG00000090363	Gm3512	ENSMUST00000090663	ENSMUSP00000088159	TRANSLATION	protein_coding	start	-	5	146	0	0	0	45.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090363	Gm3512	ENSMUST00000172431	ENSMUSP00000127813	TRANSLATION	protein_coding	-	-	5	133	0	0	0	54.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046352	Gjb2	ENSMUST00000055698	ENSMUSP00000054343	TRANSLATION	protein_coding	-	CCDS27153.1	1	226	0	1	8.8	290.4	0	-3,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000060615	Ang4	ENSMUST00000073860	ENSMUSP00000073525	TRANSLATION	protein_coding	-	CCDS36911.1	1	144	5	1	2.7	119.6	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000043881	Kbtbd7	ENSMUST00000061222	ENSMUSP00000060768	TRANSLATION	protein_coding	-	CCDS27298.1	-	690	0	0.2	1.5	178.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022215	Fitm1	ENSMUST00000022826	ENSMUSP00000022826	TRANSLATION	protein_coding	-	CCDS27116.1	1	292	0	0	7.6	0	0	-2,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000022000	Zc3h13	ENSMUST00000227049	ENSMUSP00000153882	TRANSLATION	protein_coding	-	-	-	1730	4	0	0.5	30.9	0	-4,-2	-	-	10	ALTERNATIVE:2
ENSMUSG00000022000	Zc3h13	ENSMUST00000022577	ENSMUSP00000022577	TRANSLATION	protein_coding	-	CCDS27278.1	5	1729	4	0	0.5	30.9	0	-4,-2	-	-	10	PRINCIPAL:2
ENSMUSG00000022000	Zc3h13	ENSMUST00000228470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022000	Zc3h13	ENSMUST00000226417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021810	Ecd	ENSMUST00000022344	ENSMUSP00000022344	TRANSLATION	protein_coding	-	CCDS26842.1	1	641	0	0	0.5	796.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021810	Ecd	ENSMUST00000225487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021810	Ecd	ENSMUST00000224412	ENSMUSP00000153408	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021810	Ecd	ENSMUST00000223955	ENSMUSP00000153021	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	0	0	53.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091756	Gm3095	ENSMUST00000164696	ENSMUSP00000132491	TRANSLATION	protein_coding	-	-	5	166	0	0	0	75.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076778	Trav13d-1	ENSMUST00000103588	ENSMUSP00000100365	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	54.5	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000090505	Gm3486	ENSMUST00000169361	ENSMUSP00000131656	TRANSLATION	protein_coding	start	-	1	199	0	0	0	67.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000022018	Rgcc	ENSMUST00000022595	ENSMUSP00000022595	TRANSLATION	protein_coding	-	CCDS49552.1	1	137	0	0	1.5	221.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094929	Gm3526	ENSMUST00000164544	ENSMUSP00000126356	TRANSLATION	protein_coding	-	-	5	191	0	0	0	55	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076759	Trav2	ENSMUST00000103568	ENSMUSP00000100345	TRANSLATION	TR_V_gene	stop	-	-	108	0	1	0	39.9	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076759	Trav2	ENSMUST00000196939	ENSMUSP00000142736	TRANSLATION	TR_V_gene	stop	-	-	109	0	1	0	39.9	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094460	Gm21560	ENSMUST00000168480	ENSMUSP00000133183	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	83.4	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000094460	Gm21560	ENSMUST00000177670	ENSMUSP00000136828	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	83.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021830	Txndc16	ENSMUST00000022377	ENSMUSP00000022377	TRANSLATION	protein_coding	-	CCDS26973.1	1	819	0	2.67	0.5	139.2	0	-3,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000021830	Txndc16	ENSMUST00000156600	ENSMUSP00000154370	TRANSLATION	protein_coding	start	-	2	119	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000123118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021830	Txndc16	ENSMUST00000150648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021830	Txndc16	ENSMUST00000153383	ENSMUSP00000154550	TRANSLATION	protein_coding	-	-	1	88	0	0	0	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000143609	ENSMUSP00000122128	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000128484	ENSMUSP00000154808	TRANSLATION	protein_coding	-	-	1	268	0	0	0	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000139526	ENSMUSP00000120287	TRANSLATION	protein_coding	-	CCDS79300.1	1	820	0	2.67	0.5	139.2	0	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021830	Txndc16	ENSMUST00000123879	ENSMUSP00000123023	TRANSLATION	protein_coding	-	CCDS79300.1	1	820	0	2.67	0.5	139.2	0	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021830	Txndc16	ENSMUST00000227333	ENSMUSP00000153716	TRANSLATION	protein_coding	start	-	-	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000226879	ENSMUSP00000153939	TRANSLATION	nonsense_mediated_decay	-	-	-	88	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000021830	Txndc16	ENSMUST00000147853	ENSMUSP00000154077	TRANSLATION	protein_coding	-	-	1	268	0	0	0	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000054423	Cadps	ENSMUST00000225807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054423	Cadps	ENSMUST00000225606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054423	Cadps	ENSMUST00000224704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054423	Cadps	ENSMUST00000224106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054423	Cadps	ENSMUST00000112657	ENSMUSP00000108276	TRANSLATION	protein_coding	-	-	5	1354	0	2.95	0	153	0	-4,-5	-	-	11.808	ALTERNATIVE:2
ENSMUSG00000054423	Cadps	ENSMUST00000224581	ENSMUSP00000153630	TRANSLATION	protein_coding	start/stop	-	-	402	0	0	0	114.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054423	Cadps	ENSMUST00000067491	ENSMUSP00000064706	TRANSLATION	protein_coding	-	CCDS36806.1	1	1361	0	2.95	1.7	156.2	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000054423	Cadps	ENSMUST00000177814	ENSMUSP00000136076	TRANSLATION	protein_coding	-	-	5	1356	0	2.95	0	153.5	0	-4,-5	-	-	11.838	ALTERNATIVE:2
ENSMUSG00000054423	Cadps	ENSMUST00000224140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054423	Cadps	ENSMUST00000223637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054423	Cadps	ENSMUST00000112658	ENSMUSP00000108277	TRANSLATION	protein_coding	-	CCDS36807.1	1	1355	0	2.95	1.7	153	0	-4,-5	-	-	11.808	ALTERNATIVE:2
ENSMUSG00000054423	Cadps	ENSMUST00000224882	ENSMUSP00000153426	TRANSLATION	nonsense_mediated_decay	-	-	-	867	0	2.95	0	34.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002319	Ipo4	ENSMUST00000141848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002319	Ipo4	ENSMUST00000135221	ENSMUSP00000123692	TRANSLATION	nonsense_mediated_decay	-	-	1	818	0	8.614	0	63.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002319	Ipo4	ENSMUST00000125133	ENSMUSP00000154717	TRANSLATION	protein_coding	stop	-	2	188	0	1.552	0	41.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002319	Ipo4	ENSMUST00000155464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002319	Ipo4	ENSMUST00000228754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002319	Ipo4	ENSMUST00000148942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002319	Ipo4	ENSMUST00000047131	ENSMUSP00000036555	TRANSLATION	protein_coding	-	CCDS27121.1	1	1082	0	8.614	0.5	93.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000002319	Ipo4	ENSMUST00000126064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002319	Ipo4	ENSMUST00000148351	ENSMUSP00000117543	TRANSLATION	nonsense_mediated_decay	-	-	1	98	0	0.66	0	41.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002319	Ipo4	ENSMUST00000127773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002319	Ipo4	ENSMUST00000150951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002319	Ipo4	ENSMUST00000146528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002319	Ipo4	ENSMUST00000141499	ENSMUSP00000154260	TRANSLATION	protein_coding	start	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022012	Enox1	ENSMUST00000226576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022012	Enox1	ENSMUST00000227831	ENSMUSP00000154296	TRANSLATION	nonsense_mediated_decay	-	-	-	345	0	0	0	35.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022012	Enox1	ENSMUST00000228845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022012	Enox1	ENSMUST00000227662	ENSMUSP00000154512	TRANSLATION	protein_coding	-	-	-	662	0	0	1.5	35.6	0	-4,-5	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000022012	Enox1	ENSMUST00000228102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022012	Enox1	ENSMUST00000022589	ENSMUSP00000022589	TRANSLATION	protein_coding	-	CCDS27290.1	1	643	0	0	3.9	35.6	0	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000022012	Enox1	ENSMUST00000228148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096138	Trav7-6	ENSMUST00000103641	ENSMUSP00000100418	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	72.1	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096138	Trav7-6	ENSMUST00000184687	ENSMUSP00000139015	TRANSLATION	TR_V_gene	start/stop	-	-	91	0	1	0	72.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000058997	Vwa8	ENSMUST00000227255	ENSMUSP00000154270	TRANSLATION	protein_coding	-	-	-	1038	19	2.37	1.7	342.2	0	-2,2	-	-	18.226	ALTERNATIVE:2
ENSMUSG00000058997	Vwa8	ENSMUST00000228884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058997	Vwa8	ENSMUST00000227676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058997	Vwa8	ENSMUST00000040990	ENSMUSP00000048925	TRANSLATION	protein_coding	-	CCDS49550.1	5	1905	19	2.37	4.1	342.2	0	-2,2	-	-	19	PRINCIPAL:2
ENSMUSG00000058997	Vwa8	ENSMUST00000228904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072674	Plac9b	ENSMUST00000184142	ENSMUSP00000139134	TRANSLATION	protein_coding	-	CCDS56942.1	1	108	0	0	0.5	135.1	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000072674	Plac9b	ENSMUST00000100809	ENSMUSP00000098372	TRANSLATION	protein_coding	-	-	2	47	0	0	0	89.3	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000072674	Plac9b	ENSMUST00000183811	ENSMUSP00000138869	TRANSLATION	protein_coding	-	-	3	47	0	0	0	89.3	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000072674	Plac9b	ENSMUST00000184675	ENSMUSP00000138913	TRANSLATION	protein_coding	-	-	3	47	0	0	0	89.3	0	-4,-5	-	-	3.252	MINOR
ENSMUSG00000076867	Trdv4	ENSMUST00000103679	ENSMUSP00000100456	TRANSLATION	TR_V_gene	stop	-	-	115	0	0.9	0	46.7	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000039367	Sec24c	ENSMUST00000225566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000223751	ENSMUSP00000153434	TRANSLATION	protein_coding	-	-	-	1020	4	18.08	0.5	556.1	0	-4,-5	-	-	16	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000048657	ENSMUSP00000045955	TRANSLATION	protein_coding	-	CCDS26850.1	1	1096	4	18.08	7.5	556.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000039367	Sec24c	ENSMUST00000224963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000225108	ENSMUSP00000152917	TRANSLATION	protein_coding	stop	-	-	168	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000224793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000224718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000224754	ENSMUSP00000152990	TRANSLATION	protein_coding	stop	-	-	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000224722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000224791	ENSMUSP00000153039	TRANSLATION	nonsense_mediated_decay	start	-	-	174	0	4.03	0	177.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000228545	ENSMUSP00000154291	TRANSLATION	protein_coding	start/stop	-	-	239	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000224876	ENSMUSP00000153317	TRANSLATION	nonsense_mediated_decay	-	-	-	90	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039367	Sec24c	ENSMUST00000224061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000225903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039367	Sec24c	ENSMUST00000224492	ENSMUSP00000153455	TRANSLATION	protein_coding	stop	-	-	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007817	Zmiz1	ENSMUST00000160229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007817	Zmiz1	ENSMUST00000160680	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007817	Zmiz1	ENSMUST00000007961	ENSMUSP00000007961	TRANSLATION	protein_coding	-	CCDS79280.1	1	1066	4	6.15	7.5	80.9	0	-4,-6	-	-	19	ALTERNATIVE:1
ENSMUSG00000007817	Zmiz1	ENSMUST00000159766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007817	Zmiz1	ENSMUST00000162546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007817	Zmiz1	ENSMUST00000162645	ENSMUSP00000124863	TRANSLATION	protein_coding	-	CCDS26873.1	1	1072	4	6.15	6.3	80.9	0	-4,-6	-	-	18.445	PRINCIPAL:3
ENSMUSG00000007817	Zmiz1	ENSMUST00000161766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007817	Zmiz1	ENSMUST00000160190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033470	Cysltr2	ENSMUST00000044664	ENSMUSP00000040715	TRANSLATION	protein_coding	-	CCDS27265.1	1	309	0	0.56	1.5	144.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033470	Cysltr2	ENSMUST00000169168	ENSMUSP00000125958	TRANSLATION	protein_coding	-	CCDS27265.1	1	309	0	0.56	1.5	144.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033470	Cysltr2	ENSMUST00000228821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033470	Cysltr2	ENSMUST00000228154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033470	Cysltr2	ENSMUST00000226727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095917	Olfr740	ENSMUST00000089838	ENSMUSP00000087276	TRANSLATION	protein_coding	-	CCDS27016.1	-	311	0	0.42	2.8	187.8	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095917	Olfr740	ENSMUST00000214792	ENSMUSP00000148916	TRANSLATION	protein_coding	-	CCDS27016.1	5	311	0	0.42	2.8	187.8	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000092148	Gm8005	ENSMUST00000167326	ENSMUSP00000129153	TRANSLATION	protein_coding	start	-	5	213	0	0	0	84.5	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000045306	Olfr734	ENSMUST00000217152	ENSMUSP00000150732	TRANSLATION	protein_coding	-	CCDS27010.1	5	313	0	0.36	5.2	134.7	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000045306	Olfr734	ENSMUST00000216732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045306	Olfr734	ENSMUST00000050928	ENSMUSP00000057376	TRANSLATION	protein_coding	-	CCDS27010.1	-	313	0	0.36	5.2	134.7	5	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025555	Farp1	ENSMUST00000137971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025555	Farp1	ENSMUST00000153607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025555	Farp1	ENSMUST00000135010	ENSMUSP00000116985	TRANSLATION	protein_coding	stop	-	5	211	0	4.43	0	84.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025555	Farp1	ENSMUST00000026635	ENSMUSP00000026635	TRANSLATION	protein_coding	-	CCDS37015.1	5	1048	0	19.39	3.9	449.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022111	Uchl3	ENSMUST00000226521	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022111	Uchl3	ENSMUST00000002289	ENSMUSP00000002289	TRANSLATION	protein_coding	-	CCDS27313.1	1	230	4	6.25	17	229.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022111	Uchl3	ENSMUST00000228773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022111	Uchl3	ENSMUST00000227815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022111	Uchl3	ENSMUST00000226340	ENSMUSP00000154032	TRANSLATION	protein_coding	start	-	-	265	4	5.25	0	177.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000092232	Gm20521	ENSMUST00000134077	ENSMUSP00000117229	TRANSLATION	protein_coding,RT	-	-	5	333	0	5.1	1.2	195.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000037628	Cdkn3	ENSMUST00000226621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037628	Cdkn3	ENSMUST00000067426	ENSMUSP00000070575	TRANSLATION	protein_coding	-	CCDS49466.1	1	211	10	4.83	6.4	384.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000037628	Cdkn3	ENSMUST00000228106	ENSMUSP00000154120	TRANSLATION	nonsense_mediated_decay	-	-	-	197	1	2.75	0	316.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037628	Cdkn3	ENSMUST00000227149	ENSMUSP00000153781	TRANSLATION	protein_coding	-	-	-	197	1	2.75	0	316.9	0	-4,-5	-	-	3.78	MINOR
ENSMUSG00000048922	Cdca2	ENSMUST00000124045	ENSMUSP00000116384	TRANSLATION	protein_coding	stop	-	3	310	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048922	Cdca2	ENSMUST00000155312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048922	Cdca2	ENSMUST00000130922	ENSMUSP00000119525	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048922	Cdca2	ENSMUST00000132705	ENSMUSP00000115633	TRANSLATION	protein_coding	stop	-	5	549	0	1	0	83.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048922	Cdca2	ENSMUST00000131179	ENSMUSP00000123664	TRANSLATION	protein_coding	start/stop	-	3	226	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048922	Cdca2	ENSMUST00000150006	ENSMUSP00000117847	TRANSLATION	protein_coding	-	CCDS36962.2	1	982	0	1	0.5	83.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048922	Cdca2	ENSMUST00000163100	ENSMUSP00000127571	TRANSLATION	protein_coding	-	CCDS36962.2	5	982	0	1	0.5	83.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022126	Acod1	ENSMUST00000022722	ENSMUSP00000022722	TRANSLATION	protein_coding	-	CCDS49558.1	1	488	0	1.52	1.5	406.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021917	Spcs1	ENSMUST00000186131	ENSMUSP00000139654	TRANSLATION	protein_coding	-	CCDS26903.2	1	161	0	0	0.5	105	3	-4,-7	-	-	6	MINOR
ENSMUSG00000021917	Spcs1	ENSMUST00000226782	ENSMUSP00000154282	TRANSLATION	protein_coding	-	CCDS26903.2	-	161	0	0	0.5	105	3	-4,-7	-	-	6	MINOR
ENSMUSG00000021917	Spcs1	ENSMUST00000227838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021917	Spcs1	ENSMUST00000228736	ENSMUSP00000154732	TRANSLATION	protein_coding	-	-	-	102	0	0	6.6	105	3	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000021917	Spcs1	ENSMUST00000228767	ENSMUSP00000154167	TRANSLATION	protein_coding	-	-	-	108	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000021917	Spcs1	ENSMUST00000226290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021917	Spcs1	ENSMUST00000226374	ENSMUSP00000154169	TRANSLATION	protein_coding	-	-	-	134	0	0	0	59.3	2	-4,-7	-	-	3.258	MINOR
ENSMUSG00000096574	Gm2956	ENSMUST00000177786	ENSMUSP00000137230	TRANSLATION	protein_coding	-	-	5	216	0	0	0	74.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096574	Gm2956	ENSMUST00000178722	ENSMUSP00000137105	TRANSLATION	protein_coding	stop	-	5	150	0	0	0.5	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045655	Fam216b	ENSMUST00000118785	ENSMUSP00000113562	TRANSLATION	protein_coding	-	-	5	97	0	0	0	77.2	0	-4,-7	-	-	2.286	MINOR
ENSMUSG00000045655	Fam216b	ENSMUST00000173826	ENSMUSP00000134482	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045655	Fam216b	ENSMUST00000066437	ENSMUSP00000064524	TRANSLATION	protein_coding	-	CCDS27293.1	1	138	0	0	0.5	139.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000094828	Trav3-3	ENSMUST00000181768	ENSMUSP00000137883	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	58.6	0	0,-3	-	-	-1	PRINCIPAL:5
ENSMUSG00000094828	Trav3-3	ENSMUST00000183835	ENSMUSP00000139346	TRANSLATION	TR_V_gene	start/stop	-	-	92	0	1	0	58.6	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000013701	Timm23	ENSMUST00000172052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013701	Timm23	ENSMUST00000170331	ENSMUSP00000126977	TRANSLATION	protein_coding	-	-	3	78	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000013701	Timm23	ENSMUST00000168813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013701	Timm23	ENSMUST00000168139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013701	Timm23	ENSMUST00000013845	ENSMUSP00000013845	TRANSLATION	protein_coding	-	CCDS36864.1	1	209	0	0	8.8	66	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000013701	Timm23	ENSMUST00000226683	ENSMUSP00000154804	TRANSLATION	protein_coding	-	-	-	197	0	0	0	53.1	0	-4,-6	-	-	4.83	MINOR
ENSMUSG00000013701	Timm23	ENSMUST00000163379	ENSMUSP00000129688	TRANSLATION	nonsense_mediated_decay	-	-	3	61	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013701	Timm23	ENSMUST00000170233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095551	Gm7980	ENSMUST00000168107	ENSMUSP00000126952	TRANSLATION	protein_coding	start	-	5	213	0	0	0	88.3	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000095370	Trav6n-7	ENSMUST00000179607	ENSMUSP00000137407	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.6	0	45.2	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000091140	Gm17124	ENSMUST00000168320	ENSMUSP00000126204	TRANSLATION	protein_coding	start	-	5	213	0	0	0	91	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000091429	Gm17093	ENSMUST00000170427	ENSMUSP00000132075	TRANSLATION	protein_coding	start	-	5	214	0	0	0	89	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000021843	Ktn1	ENSMUST00000022391	ENSMUSP00000022391	TRANSLATION	protein_coding	-	CCDS36900.1	1	1327	0	0	0.5	32.4	1	-3,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000021843	Ktn1	ENSMUST00000189101	ENSMUSP00000140178	TRANSLATION	protein_coding	-	CCDS84136.1	5	1200	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000185940	ENSMUSP00000139625	TRANSLATION	protein_coding	-	CCDS84135.1	5	1223	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000187839	ENSMUSP00000140324	TRANSLATION	protein_coding	-	CCDS36900.1	5	1327	0	0	0.5	32.4	1	-3,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000021843	Ktn1	ENSMUST00000187039	ENSMUSP00000140202	TRANSLATION	protein_coding	-	CCDS84135.1	5	1223	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000189533	ENSMUSP00000140142	TRANSLATION	protein_coding	-	CCDS84132.1	5	1247	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000191018	ENSMUSP00000139585	TRANSLATION	protein_coding	-	-	5	1280	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000191511	ENSMUSP00000139946	TRANSLATION	protein_coding	-	-	5	1252	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000188330	ENSMUSP00000140845	TRANSLATION	protein_coding	-	CCDS84133.1	5	1224	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000190999	ENSMUSP00000139673	TRANSLATION	protein_coding	-	-	5	1275	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000185343	ENSMUSP00000140186	TRANSLATION	protein_coding	-	CCDS84130.1	5	1229	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000186700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021843	Ktn1	ENSMUST00000190182	ENSMUSP00000140301	TRANSLATION	protein_coding	-	CCDS84124.1	5	1275	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000188263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021843	Ktn1	ENSMUST00000191446	ENSMUSP00000140748	TRANSLATION	protein_coding	-	-	5	1275	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000186761	ENSMUSP00000139521	TRANSLATION	protein_coding	-	CCDS84125.1	5	1247	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000187262	ENSMUSP00000140206	TRANSLATION	protein_coding	-	CCDS84123.1	5	1252	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000190535	ENSMUSP00000139952	TRANSLATION	protein_coding	-	CCDS84126.1	5	1304	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000186627	ENSMUSP00000140873	TRANSLATION	protein_coding	-	-	5	1228	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000190252	ENSMUSP00000140011	TRANSLATION	protein_coding	-	CCDS79305.1	1	1270	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000188049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021843	Ktn1	ENSMUST00000188553	ENSMUSP00000140865	TRANSLATION	protein_coding	-	CCDS84127.1	5	1253	0	0	0.5	32.4	1	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021843	Ktn1	ENSMUST00000189986	ENSMUSP00000139970	TRANSLATION	nonsense_mediated_decay	-	-	5	178	0	0	0	29.2	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000021843	Ktn1	ENSMUST00000190164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021843	Ktn1	ENSMUST00000190857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021843	Ktn1	ENSMUST00000186466	ENSMUSP00000140523	TRANSLATION	protein_coding	stop	-	3	176	0	0	0	29.2	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000072672	Duxbl3	ENSMUST00000100804	ENSMUSP00000098367	TRANSLATION	protein_coding	-	CCDS49428.1	1	350	0	2.698	0.5	119.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000072672	Duxbl3	ENSMUST00000173017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072672	Duxbl3	ENSMUST00000173423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072672	Duxbl3	ENSMUST00000174494	ENSMUSP00000134562	TRANSLATION	protein_coding	stop	-	3	76	0	1.498	0	54.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072672	Duxbl3	ENSMUST00000112340	ENSMUSP00000107959	TRANSLATION	protein_coding	-	-	1	201	0	2.298	0	92.1	0	-4,-7	-	-	9.45	MINOR
ENSMUSG00000072672	Duxbl3	ENSMUST00000172517	ENSMUSP00000133538	TRANSLATION	protein_coding	stop	-	3	189	0	2.698	0	119.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021772	Nkiras1	ENSMUST00000133460	ENSMUSP00000122235	TRANSLATION	protein_coding	stop	-	3	118	4	1.8	0	70.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021772	Nkiras1	ENSMUST00000150209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021772	Nkiras1	ENSMUST00000132374	ENSMUSP00000121496	TRANSLATION	protein_coding	-	CCDS26836.1	1	192	15	3.08	17.3	93.4	0	-3,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000021772	Nkiras1	ENSMUST00000156186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021772	Nkiras1	ENSMUST00000152735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021772	Nkiras1	ENSMUST00000145355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021772	Nkiras1	ENSMUST00000022294	ENSMUSP00000022294	TRANSLATION	nonsense_mediated_decay	-	-	1	58	8	0.8	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000021840	Mapk1ip1l	ENSMUST00000228058	ENSMUSP00000154193	TRANSLATION	protein_coding	start	-	-	153	0	0	0	73.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021840	Mapk1ip1l	ENSMUST00000164235	ENSMUSP00000132875	TRANSLATION	protein_coding	-	CCDS49469.1	1	242	0	0	1.5	331.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021840	Mapk1ip1l	ENSMUST00000227941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021840	Mapk1ip1l	ENSMUST00000227554	ENSMUSP00000154689	TRANSLATION	protein_coding	stop	-	-	139	0	0	0	186	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021840	Mapk1ip1l	ENSMUST00000166743	ENSMUSP00000127475	TRANSLATION	protein_coding	-	CCDS49469.1	1	242	0	0	1.5	331.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096405	4930474N05Rik	ENSMUST00000226305	ENSMUSP00000153709	TRANSLATION	protein_coding	-	CCDS49448.1	-	218	0	0.998	0.5	53	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096405	4930474N05Rik	ENSMUST00000186722	ENSMUSP00000139748	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096405	4930474N05Rik	ENSMUST00000177985	ENSMUSP00000136756	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045107	Saysd1	ENSMUST00000226090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045107	Saysd1	ENSMUST00000059666	ENSMUSP00000055382	TRANSLATION	protein_coding	-	CCDS49406.1	1	188	0	0	0.5	100.4	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000090643	Gm3453	ENSMUST00000178308	ENSMUSP00000137254	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090643	Gm3453	ENSMUST00000170686	ENSMUSP00000131479	TRANSLATION	protein_coding	-	-	5	263	0	0	0	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000037780	Mbl1	ENSMUST00000225792	ENSMUSP00000153147	TRANSLATION	protein_coding	-	CCDS26961.1	-	239	10	2.39	0.5	95.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037780	Mbl1	ENSMUST00000047095	ENSMUSP00000048765	TRANSLATION	nonsense_mediated_decay	-	-	1	91	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000156628	ENSMUSP00000123546	TRANSLATION	protein_coding	stop	-	5	1460	2	18.39	0	612.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000112095	ENSMUSP00000107724	TRANSLATION	protein_coding	-	-	5	1634	2	18.39	2.4	612.6	0	-4,-7	-	-	14.114	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000135704	ENSMUSP00000115505	TRANSLATION	protein_coding	start/stop	-	5	1085	2	16.41	0	492.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000145497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042323	Pbrm1	ENSMUST00000112098	ENSMUSP00000107727	TRANSLATION	protein_coding	-	CCDS36851.1	5	1704	2	18.14	6.3	619.5	0	-4,-7	-	-	15.502	PRINCIPAL:2
ENSMUSG00000042323	Pbrm1	ENSMUST00000123678	ENSMUSP00000120549	TRANSLATION	nonsense_mediated_decay	-	-	5	856	2	12.49	0	378.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000112092	ENSMUSP00000107721	TRANSLATION	protein_coding	-	-	5	1652	2	18.14	0	619.5	0	-4,-7	-	-	13.502	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000022471	ENSMUSP00000022471	TRANSLATION	protein_coding	-	-	5	1582	2	18.39	2.4	611.6	0	-4,-7	-	-	14.054	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000090214	ENSMUSP00000087682	TRANSLATION	protein_coding	-	-	5	1689	2	18.39	2.4	619.5	0	-4,-7	-	-	14.528	ALTERNATIVE:2
ENSMUSG00000042323	Pbrm1	ENSMUST00000052239	ENSMUSP00000060476	TRANSLATION	protein_coding	-	-	5	1582	2	17.64	1.2	553.8	0	-4,-7	-	-	8.634	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000144009	ENSMUSP00000123518	TRANSLATION	protein_coding	stop	-	2	84	0	0.66	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000136237	ENSMUSP00000119722	TRANSLATION	nonsense_mediated_decay	-	-	5	860	2	12.49	0	378.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000112106	ENSMUSP00000107734	TRANSLATION	protein_coding	stop	-	2	91	0	0.99	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000022474	ENSMUSP00000022474	TRANSLATION	protein_coding	-	-	5	1597	2	18.14	0	611.6	0	-4,-7	-	-	13.028	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000156407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042323	Pbrm1	ENSMUST00000146325	ENSMUSP00000122805	TRANSLATION	protein_coding	stop	-	1	931	2	13.49	0	390.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000042323	Pbrm1	ENSMUST00000112094	ENSMUSP00000107723	TRANSLATION	protein_coding	-	-	5	1602	2	18.39	0	612.6	0	-4,-7	-	-	13.586	MINOR
ENSMUSG00000021273	Fdft1	ENSMUST00000224625	ENSMUSP00000153671	TRANSLATION	protein_coding	-	CCDS27198.1	-	416	3	6.8	8.8	137	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021273	Fdft1	ENSMUST00000238526	ENSMUSP00000158805	TRANSLATION	protein_coding	-	-	-	460	3	6.8	0	137	2	-2,0	-	-	15	MINOR
ENSMUSG00000021273	Fdft1	ENSMUST00000054963	ENSMUSP00000055313	TRANSLATION	protein_coding	-	CCDS27198.1	1	416	3	6.8	8.8	137	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000021273	Fdft1	ENSMUST00000224267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021273	Fdft1	ENSMUST00000223810	ENSMUSP00000153238	TRANSLATION	nonsense_mediated_decay	-	-	-	135	3	2	0	31	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076898	Traj31	ENSMUST00000103710	ENSMUSP00000142343	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000114942	Gm49361	ENSMUST00000174694	ENSMUSP00000133680	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	853	17	1.864	0	135.9	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000091296	Gm4181	ENSMUST00000170249	ENSMUSP00000130101	TRANSLATION	protein_coding	-	-	1	184	0	0	0.5	79.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000091296	Gm4181	ENSMUST00000226595	ENSMUSP00000153949	TRANSLATION	nonsense_mediated_decay	-	-	-	59	0	0	0	47	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050335	Lgals3	ENSMUST00000226585	ENSMUSP00000154551	TRANSLATION	protein_coding	stop	-	-	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050335	Lgals3	ENSMUST00000150290	ENSMUSP00000114350	TRANSLATION	protein_coding	-	CCDS26986.1	1	264	9	3.43	1.5	129.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050335	Lgals3	ENSMUST00000142734	ENSMUSP00000118169	TRANSLATION	protein_coding	-	CCDS26986.1	1	264	9	3.43	1.5	129.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050335	Lgals3	ENSMUST00000146468	ENSMUSP00000119275	TRANSLATION	protein_coding	-	CCDS26986.1	1	264	9	3.43	1.5	129.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000050335	Lgals3	ENSMUST00000151405	ENSMUSP00000118660	TRANSLATION	protein_coding	stop	-	3	139	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050335	Lgals3	ENSMUST00000144794	ENSMUSP00000114177	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076875	Traj58	ENSMUST00000103687	ENSMUSP00000143088	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000041044	Lrit1	ENSMUST00000120052	ENSMUSP00000113964	TRANSLATION	protein_coding	-	CCDS26950.2	1	624	0	2	6.3	116.5	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000040818	Dennd6a	ENSMUST00000224248	ENSMUSP00000152966	TRANSLATION	protein_coding	-	-	-	381	0	0	1.5	0	0	-4,-7	-	-	0.244	MINOR
ENSMUSG00000040818	Dennd6a	ENSMUST00000203874	ENSMUSP00000144906	TRANSLATION	protein_coding	-	CCDS84101.1	1	559	0	0	0.5	33.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000040818	Dennd6a	ENSMUST00000224111	ENSMUSP00000153187	TRANSLATION	protein_coding	-	-	-	381	0	0	1.5	0	0	-4,-7	-	-	0.244	MINOR
ENSMUSG00000040818	Dennd6a	ENSMUST00000224378	ENSMUSP00000153200	TRANSLATION	protein_coding	-	-	-	255	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040818	Dennd6a	ENSMUST00000037585	ENSMUSP00000039361	TRANSLATION	protein_coding	-	CCDS49430.1	1	605	0	0	5.1	33.5	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000040818	Dennd6a	ENSMUST00000225206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063106	Olfr1510	ENSMUST00000079459	ENSMUSP00000078424	TRANSLATION	protein_coding	-	CCDS27058.1	-	318	0	0.2	3.9	166.3	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000063106	Olfr1510	ENSMUST00000215928	ENSMUSP00000150294	TRANSLATION	protein_coding	-	CCDS27058.1	3	318	0	0.2	3.9	166.3	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000076911	Traj18	ENSMUST00000103723	ENSMUSP00000143421	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0.75	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000063787	Chchd1	ENSMUST00000224633	ENSMUSP00000152969	TRANSLATION	protein_coding	-	-	-	70	0	2	0	28.5	0	-4,-5	-	-	8.358	MINOR
ENSMUSG00000063787	Chchd1	ENSMUST00000226072	ENSMUSP00000153514	TRANSLATION	nonsense_mediated_decay	-	-	-	55	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063787	Chchd1	ENSMUST00000224132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063787	Chchd1	ENSMUST00000071215	ENSMUSP00000071202	TRANSLATION	protein_coding	-	CCDS26852.1	1	118	0	3.33	8.8	34.1	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000063787	Chchd1	ENSMUST00000225527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000228354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000227969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000228598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000228288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022064	Pibf1	ENSMUST00000022650	ENSMUSP00000022650	TRANSLATION	protein_coding	-	CCDS36997.1	5	756	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000022064	Pibf1	ENSMUST00000226935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000228279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022064	Pibf1	ENSMUST00000228246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006522	Itih3	ENSMUST00000006697	ENSMUSP00000006697	TRANSLATION	protein_coding	-	CCDS49434.1	5	889	3	1.74	1.5	440.1	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000006522	Itih3	ENSMUST00000227181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006522	Itih3	ENSMUST00000228114	ENSMUSP00000154720	TRANSLATION	protein_coding	start/stop	-	-	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006522	Itih3	ENSMUST00000227995	ENSMUSP00000154659	TRANSLATION	protein_coding	-	-	-	699	3	1.74	0	394.9	0	2,-2	-	-	12.288	MINOR
ENSMUSG00000006522	Itih3	ENSMUST00000226179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006522	Itih3	ENSMUST00000226547	ENSMUSP00000154256	TRANSLATION	protein_coding	start/stop	-	-	224	0	0	0	70.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095643	Trav13d-3	ENSMUST00000179512	ENSMUSP00000136474	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	56.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021750	Fam107a	ENSMUST00000121887	ENSMUSP00000114015	TRANSLATION	protein_coding	-	CCDS26813.1	1	144	0	0	9.7	134.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021750	Fam107a	ENSMUST00000137133	ENSMUSP00000120854	TRANSLATION	protein_coding	stop	-	2	99	0	0	0	100.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021750	Fam107a	ENSMUST00000036070	ENSMUSP00000045513	TRANSLATION	protein_coding	-	CCDS26813.1	1	144	0	0	9.7	134.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000021750	Fam107a	ENSMUST00000120411	ENSMUSP00000112769	TRANSLATION	protein_coding	-	-	1	172	0	0	6	134.2	0	-4,-5	-	-	7.725	MINOR
ENSMUSG00000079364	Gm3558	ENSMUST00000163790	ENSMUSP00000130601	TRANSLATION	protein_coding	-	CCDS56936.1	1	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022175	Lrp10	ENSMUST00000227760	ENSMUSP00000154451	TRANSLATION	nonsense_mediated_decay	start	-	-	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022175	Lrp10	ENSMUST00000022782	ENSMUSP00000022782	TRANSLATION	protein_coding	-	CCDS27089.1	1	713	13	1.16	1.7	109.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022175	Lrp10	ENSMUST00000226472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022175	Lrp10	ENSMUST00000228407	ENSMUSP00000154017	TRANSLATION	protein_coding	start	-	-	131	5	1	0	42	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015966	Il17rb	ENSMUST00000223643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015966	Il17rb	ENSMUST00000225746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015966	Il17rb	ENSMUST00000122205	ENSMUSP00000113686	TRANSLATION	protein_coding	-	-	5	499	2	4.489	1.5	268.1	1	1,-4	-	-	13.61	ALTERNATIVE:2
ENSMUSG00000015966	Il17rb	ENSMUST00000136726	ENSMUSP00000117802	TRANSLATION	nonsense_mediated_decay	-	-	5	212	2	2.109	0	76.5	0	1,-4	-	-	-1	MINOR
ENSMUSG00000015966	Il17rb	ENSMUST00000135888	ENSMUSP00000121407	TRANSLATION	nonsense_mediated_decay	-	-	5	140	4	1.449	0	39.5	0	1,-4	-	-	-1	MINOR
ENSMUSG00000015966	Il17rb	ENSMUST00000016110	ENSMUSP00000016110	TRANSLATION	protein_coding	-	CCDS36845.1	1	499	2	4.589	1.5	271.3	1	1,-4	-	-	14	PRINCIPAL:2
ENSMUSG00000023387	Kcnk16	ENSMUST00000225596	ENSMUSP00000153256	TRANSLATION	protein_coding	-	-	-	162	0	2.4	0	54.1	3	-4,-6	-	-	3.426	MINOR
ENSMUSG00000023387	Kcnk16	ENSMUST00000024155	ENSMUSP00000024155	TRANSLATION	protein_coding	-	CCDS49407.1	5	292	0	4.75	3.9	118.7	5	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000108841	Frmpd2	ENSMUST00000208853	ENSMUSP00000146522	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000108841	Frmpd2	ENSMUST00000207581	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108841	Frmpd2	ENSMUST00000208577	ENSMUSP00000146693	TRANSLATION	protein_coding	-	-	5	1392	0	9.87	0	339.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000108841	Frmpd2	ENSMUST00000208380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076762	Trav6-1	ENSMUST00000103571	ENSMUSP00000100348	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.4	0	36	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000096505	Trav4d-4	ENSMUST00000103600	ENSMUSP00000100377	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	43.5	0	2,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000072571	Tmem253	ENSMUST00000226268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072571	Tmem253	ENSMUST00000227295	ENSMUSP00000154460	TRANSLATION	protein_coding	-	-	-	170	0	0	0.5	0	2	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000072571	Tmem253	ENSMUST00000228408	ENSMUSP00000153729	TRANSLATION	protein_coding	-	-	-	47	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000072571	Tmem253	ENSMUST00000100638	ENSMUSP00000098203	TRANSLATION	protein_coding	-	CCDS27049.1	1	204	0	0	1.5	0	4	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000040822	1700123O20Rik	ENSMUST00000228027	ENSMUSP00000154271	TRANSLATION	protein_coding	stop	-	-	103	0	0	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040822	1700123O20Rik	ENSMUST00000227269	ENSMUSP00000153947	TRANSLATION	protein_coding	-	CCDS27099.1	-	142	0	0	2.7	114.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040822	1700123O20Rik	ENSMUST00000038539	ENSMUSP00000047702	TRANSLATION	protein_coding	-	CCDS27099.1	1	142	0	0	2.7	114.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040822	1700123O20Rik	ENSMUST00000226235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000076890	Traj40	ENSMUST00000103702	ENSMUSP00000143787	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096478	Trav9d-1	ENSMUST00000178426	ENSMUSP00000136741	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	53.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000022014	Epsti1	ENSMUST00000022591	ENSMUSP00000022591	TRANSLATION	protein_coding	-	CCDS56971.1	1	314	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000022014	Epsti1	ENSMUST00000169978	ENSMUSP00000130138	TRANSLATION	protein_coding	-	-	5	216	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000022014	Epsti1	ENSMUST00000227903	ENSMUSP00000154502	TRANSLATION	protein_coding	-	-	-	229	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000094825	Gm3194	ENSMUST00000180867	ENSMUSP00000137682	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000094825	Gm3194	ENSMUST00000180143	ENSMUSP00000137641	TRANSLATION	protein_coding	-	-	5	259	0	0	0.5	75.5	0	-4,-2	-	-	6	PRINCIPAL:5
ENSMUSG00000060377	Rpl36a-ps1	ENSMUST00000081987	ENSMUSP00000153782	TRANSLATION	protein_coding	-	-	-	106	2	0.8	19.5	131.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000076871	Trdj2	ENSMUST00000103683	ENSMUSP00000143329	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021966	Prss52	ENSMUST00000022537	ENSMUSP00000022537	TRANSLATION	protein_coding	-	CCDS36953.1	1	321	6	2.88	0.5	203.7	0	3,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000010376	Nedd8	ENSMUST00000228414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010376	Nedd8	ENSMUST00000227250	ENSMUSP00000154561	TRANSLATION	protein_coding	start	-	-	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010376	Nedd8	ENSMUST00000227157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010376	Nedd8	ENSMUST00000010520	ENSMUSP00000010520	TRANSLATION	protein_coding	-	CCDS49498.1	1	81	0	2.58	11.5	95.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000010376	Nedd8	ENSMUST00000163750	ENSMUSP00000130492	TRANSLATION	protein_coding	-	CCDS49498.1	1	81	0	2.58	11.5	95.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079402	Gm3020	ENSMUST00000112801	ENSMUSP00000108420	TRANSLATION	protein_coding	stop	-	5	150	0	0	0.5	68.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079402	Gm3020	ENSMUST00000167430	ENSMUSP00000127384	TRANSLATION	protein_coding	-	-	1	150	0	0	0.5	68.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021848	Otx2	ENSMUST00000228512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021848	Otx2	ENSMUST00000118578	ENSMUSP00000113690	TRANSLATION	protein_coding	-	CCDS49473.1	1	289	0	2.17	15.5	189.2	0	-4,-6	-	-	15.352	PRINCIPAL:1
ENSMUSG00000021848	Otx2	ENSMUST00000122009	ENSMUSP00000113930	TRANSLATION	protein_coding	-	CCDS49473.1	1	289	0	2.17	15.5	189.2	0	-4,-6	-	-	15.352	PRINCIPAL:1
ENSMUSG00000021848	Otx2	ENSMUST00000135279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021848	Otx2	ENSMUST00000226501	ENSMUSP00000154264	TRANSLATION	protein_coding	-	CCDS49473.1	-	289	0	2.17	15.5	189.2	0	-4,-6	-	-	15.352	PRINCIPAL:1
ENSMUSG00000021848	Otx2	ENSMUST00000227404	ENSMUSP00000154066	TRANSLATION	protein_coding	-	CCDS49473.1	-	289	0	2.17	15.5	189.2	0	-4,-6	-	-	15.352	PRINCIPAL:1
ENSMUSG00000021848	Otx2	ENSMUST00000119070	ENSMUSP00000112532	TRANSLATION	protein_coding	-	CCDS70575.1	1	297	0	2.434	6.3	189.2	0	-4,-5	-	-	13.464	MINOR
ENSMUSG00000021848	Otx2	ENSMUST00000133479	ENSMUSP00000122200	TRANSLATION	protein_coding	stop	-	3	63	0	1.14	0	27.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021848	Otx2	ENSMUST00000119739	ENSMUSP00000113586	TRANSLATION	protein_coding	stop	-	3	46	0	0.14	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021848	Otx2	ENSMUST00000144465	ENSMUSP00000116630	TRANSLATION	protein_coding	stop	-	3	98	0	2.234	0	72	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021848	Otx2	ENSMUST00000152018	ENSMUSP00000123454	TRANSLATION	protein_coding	stop	-	2	207	0	2.17	0	153.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000076822	Trav16n	ENSMUST00000199280	ENSMUSP00000143456	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.4	0	60.6	0	2,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076822	Trav16n	ENSMUST00000103633	ENSMUSP00000100410	TRANSLATION	TR_V_gene	stop	-	-	117	0	1.4	0	60.6	0	2,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000041594	Tmtc4	ENSMUST00000125900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041594	Tmtc4	ENSMUST00000126494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041594	Tmtc4	ENSMUST00000148661	ENSMUSP00000121523	TRANSLATION	protein_coding	-	CCDS27352.1	1	741	0	5.3	7.6	237.6	11	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000041594	Tmtc4	ENSMUST00000228552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041594	Tmtc4	ENSMUST00000135917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041594	Tmtc4	ENSMUST00000153496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041594	Tmtc4	ENSMUST00000126867	ENSMUSP00000116379	TRANSLATION	protein_coding	-	CCDS27352.1	5	741	0	5.3	7.6	237.6	11	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000041594	Tmtc4	ENSMUST00000228661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041594	Tmtc4	ENSMUST00000143189	ENSMUSP00000116480	TRANSLATION	nonsense_mediated_decay	-	-	1	306	0	0	0	0	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000041594	Tmtc4	ENSMUST00000141478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041594	Tmtc4	ENSMUST00000128969	ENSMUSP00000118814	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041594	Tmtc4	ENSMUST00000227430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041594	Tmtc4	ENSMUST00000037726	ENSMUSP00000046368	TRANSLATION	protein_coding	-	CCDS27352.1	1	741	0	5.3	7.6	237.6	11	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000090691	Gm3667	ENSMUST00000171906	ENSMUSP00000133107	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	75.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000114865	Gm29776	ENSMUST00000224691	ENSMUSP00000153646	TRANSLATION	protein_coding	-	-	-	699	4	1.98	0.5	0	0	0,0	-	-	10	PRINCIPAL:1
ENSMUSG00000114865	Gm29776	ENSMUST00000227947	ENSMUSP00000153756	TRANSLATION	protein_coding	start/stop	-	-	381	4	1.54	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000068417	Pnp2	ENSMUST00000228593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068417	Pnp2	ENSMUST00000095925	ENSMUSP00000093615	TRANSLATION	protein_coding	-	CCDS49479.1	1	305	12	5.1	0.5	180.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079197	Psme2	ENSMUST00000161027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000159282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000159845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000162700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000111378	ENSMUSP00000107009	TRANSLATION	protein_coding	-	CCDS49495.1	5	231	0	5.84	0.5	259.1	0	-4,-6	-	-	11.256	MINOR
ENSMUSG00000079197	Psme2	ENSMUST00000161807	ENSMUSP00000123798	TRANSLATION	protein_coding	-	CCDS49494.1	1	239	0	6.04	8.8	264.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000079197	Psme2	ENSMUST00000162496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000159297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000161573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079197	Psme2	ENSMUST00000159687	ENSMUSP00000125596	TRANSLATION	protein_coding	stop	-	3	165	0	4.16	0	175.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000118466	ENSMUSP00000112377	TRANSLATION	protein_coding	-	CCDS84116.1	1	229	0	0	8.8	53.3	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000021792	Prxl2a	ENSMUST00000134715	ENSMUSP00000115439	TRANSLATION	protein_coding	stop	-	5	103	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000128236	ENSMUSP00000120052	TRANSLATION	protein_coding	stop	-	5	89	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000130166	ENSMUSP00000122866	TRANSLATION	protein_coding	stop	-	3	176	0	0	0	43	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000022317	ENSMUSP00000022317	TRANSLATION	protein_coding	-	CCDS26957.1	1	218	0	0	5.3	53.3	1	0,-3	-	-	7.653	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000136661	ENSMUSP00000121795	TRANSLATION	protein_coding	stop	-	5	203	0	0	0	53.3	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000143143	ENSMUSP00000115839	TRANSLATION	protein_coding	stop	-	2	174	0	0	0	39.4	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000135797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021792	Prxl2a	ENSMUST00000152837	ENSMUSP00000123109	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	1	0,-3	-	-	-1	MINOR
ENSMUSG00000021792	Prxl2a	ENSMUST00000153830	ENSMUSP00000117278	TRANSLATION	protein_coding	stop	-	2	229	0	0	8.8	53.3	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000076914	Traj15	ENSMUST00000103726	ENSMUSP00000143467	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000016831	Tox4	ENSMUST00000152493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016831	Tox4	ENSMUST00000022766	ENSMUSP00000022766	TRANSLATION	protein_coding	-	CCDS36920.1	5	619	0	1.75	7.5	64.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000016831	Tox4	ENSMUST00000137753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016831	Tox4	ENSMUST00000173361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016831	Tox4	ENSMUST00000172655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053205	Styx	ENSMUST00000228311	ENSMUSP00000154148	TRANSLATION	nonsense_mediated_decay	-	-	-	223	9	5.28	15	130.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000226785	ENSMUSP00000154662	TRANSLATION	nonsense_mediated_decay	-	-	-	55	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000227538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053205	Styx	ENSMUST00000228818	ENSMUSP00000154485	TRANSLATION	protein_coding	stop	-	-	66	0	1.43	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000226303	ENSMUSP00000154228	TRANSLATION	nonsense_mediated_decay	-	-	-	52	0	0.93	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000226603	ENSMUSP00000154323	TRANSLATION	nonsense_mediated_decay	-	-	-	115	1	2.93	0	34.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000226873	ENSMUSP00000153854	TRANSLATION	protein_coding	-	CCDS26975.1	-	223	9	5.28	15	130.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000053205	Styx	ENSMUST00000111835	ENSMUSP00000107466	TRANSLATION	nonsense_mediated_decay	-	-	1	205	9	4.88	0	127	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053205	Styx	ENSMUST00000228321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023110	Prmt5	ENSMUST00000133552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023110	Prmt5	ENSMUST00000139964	ENSMUSP00000121502	TRANSLATION	protein_coding	start/stop	-	3	203	8	5	0	155.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023110	Prmt5	ENSMUST00000023873	ENSMUSP00000023873	TRANSLATION	protein_coding	-	CCDS27091.1	1	637	15	16.33	1.5	242.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023110	Prmt5	ENSMUST00000147214	ENSMUSP00000154584	TRANSLATION	nonsense_mediated_decay	-	-	3	37	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023110	Prmt5	ENSMUST00000132801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023110	Prmt5	ENSMUST00000138367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023110	Prmt5	ENSMUST00000132227	ENSMUSP00000138549	TRANSLATION	nonsense_mediated_decay	-	-	5	63	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022056	Adam7	ENSMUST00000022640	ENSMUSP00000022640	TRANSLATION	protein_coding	-	CCDS27234.1	1	789	19	8.89	1.5	484.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022056	Adam7	ENSMUST00000128069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022056	Adam7	ENSMUST00000225673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059648	Rnase11	ENSMUST00000076106	ENSMUSP00000075472	TRANSLATION	protein_coding	-	CCDS27031.1	-	192	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000060579	Fhit	ENSMUST00000160956	ENSMUSP00000123820	TRANSLATION	protein_coding	stop	-	3	57	8	1.75	0	34.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060579	Fhit	ENSMUST00000161179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060579	Fhit	ENSMUST00000161895	ENSMUSP00000124957	TRANSLATION	protein_coding	stop	-	3	124	15	3.99	0	90.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060579	Fhit	ENSMUST00000162817	ENSMUSP00000124500	TRANSLATION	protein_coding	stop	-	5	100	15	3.16	0	86.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000060579	Fhit	ENSMUST00000179394	ENSMUSP00000136011	TRANSLATION	protein_coding	-	CCDS49400.1	5	150	15	4.74	15.1	90.9	0	-4,-2	-	-	21.79	PRINCIPAL:1
ENSMUSG00000060579	Fhit	ENSMUST00000162278	ENSMUSP00000124073	TRANSLATION	protein_coding	-	CCDS49400.1	1	150	15	4.74	15.1	90.9	0	-4,-2	-	-	21.79	PRINCIPAL:1
ENSMUSG00000060579	Fhit	ENSMUST00000160340	ENSMUSP00000124017	TRANSLATION	protein_coding	-	CCDS79263.1	5	213	15	4.845	0.5	90.9	0	-4,-7	-	-	18	MINOR
ENSMUSG00000060579	Fhit	ENSMUST00000161302	ENSMUSP00000123874	TRANSLATION	protein_coding	-	CCDS49400.1	1	150	15	4.74	15.1	90.9	0	-4,-2	-	-	21.79	PRINCIPAL:1
ENSMUSG00000059606	Rnase2b	ENSMUST00000075648	ENSMUSP00000075074	TRANSLATION	protein_coding	-	CCDS27039.1	-	155	5	1	1.5	120.3	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180500	ENSMUSP00000137667	TRANSLATION	protein_coding	start/stop	-	3	201	0	4.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000111603	ENSMUSP00000107230	TRANSLATION	protein_coding	-	CCDS36918.1	1	1331	0	6.84	0.5	190.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181709	ENSMUSP00000137664	TRANSLATION	nonsense_mediated_decay	start	-	5	191	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180513	ENSMUSP00000137991	TRANSLATION	protein_coding	start/stop	-	5	71	0	1.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181627	ENSMUSP00000137840	TRANSLATION	nonsense_mediated_decay	start	-	5	91	0	0.61	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181736	ENSMUSP00000137892	TRANSLATION	nonsense_mediated_decay	start	-	5	82	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000111600	ENSMUSP00000107227	TRANSLATION	protein_coding	-	CCDS49490.1	1	1127	0	4.99	0.5	22.9	0	-4,-5	-	-	2.298	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181401	ENSMUSP00000138027	TRANSLATION	protein_coding	-	-	1	1320	0	6.84	0	190.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181017	ENSMUSP00000137900	TRANSLATION	protein_coding	start	-	2	295	0	4.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000181673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180646	ENSMUSP00000137751	TRANSLATION	nonsense_mediated_decay	-	-	1	289	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057132	Rpgrip1	ENSMUST00000180901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033004	Mycbp2	ENSMUST00000160758	ENSMUSP00000124601	TRANSLATION	protein_coding	start	-	5	4636	7	12.13	0	407.6	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000033004	Mycbp2	ENSMUST00000162852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033004	Mycbp2	ENSMUST00000161008	ENSMUSP00000124443	TRANSLATION	protein_coding	start	-	1	1463	7	0	0	56.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033004	Mycbp2	ENSMUST00000162762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033004	Mycbp2	ENSMUST00000162537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033004	Mycbp2	ENSMUST00000239305	ENSMUSP00000159215	TRANSLATION	nonsense_mediated_decay	-	-	-	882	0	2.23	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033004	Mycbp2	ENSMUST00000159855	ENSMUSP00000124710	TRANSLATION	protein_coding	-	CCDS49559.1	1	4746	7	12.13	0.5	407.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033004	Mycbp2	ENSMUST00000226961	ENSMUSP00000154774	TRANSLATION	protein_coding	start/stop	-	-	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033004	Mycbp2	ENSMUST00000161278	ENSMUSP00000125189	TRANSLATION	protein_coding	start/stop	-	1	871	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000105721	Trav7d-6	ENSMUST00000196756	ENSMUSP00000143226	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	70.3	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000035960	Apex1	ENSMUST00000049411	ENSMUSP00000042602	TRANSLATION	protein_coding	-	CCDS27027.1	1	317	9	5.58	7.5	77.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035960	Apex1	ENSMUST00000128395	ENSMUSP00000116319	TRANSLATION	protein_coding	start	-	5	289	9	4.83	0	74.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035960	Apex1	ENSMUST00000136753	ENSMUSP00000123148	TRANSLATION	protein_coding	stop	-	2	177	5	3.58	0	33.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035960	Apex1	ENSMUST00000154288	ENSMUSP00000122343	TRANSLATION	protein_coding	stop	-	2	214	7	4.58	0	53.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022132	Cldn10	ENSMUST00000100314	ENSMUSP00000097889	TRANSLATION	protein_coding	-	CCDS37010.1	1	231	0	3.55	10.8	163.5	8	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000022132	Cldn10	ENSMUST00000071546	ENSMUSP00000071476	TRANSLATION	protein_coding	-	CCDS49566.1	1	193	0	2.35	0.5	111.5	5	-2,-6	-	-	6.48	MINOR
ENSMUSG00000022132	Cldn10	ENSMUST00000047761	ENSMUSP00000041616	TRANSLATION	protein_coding	-	CCDS37009.1	1	229	0	3.15	8.8	140.8	7	-2,-6	-	-	12.228	MINOR
ENSMUSG00000094285	Olfr743	ENSMUST00000071294	ENSMUSP00000071263	TRANSLATION	protein_coding	-	CCDS49475.1	-	311	0	0.42	1.5	190.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094285	Olfr743	ENSMUST00000215793	ENSMUSP00000150946	TRANSLATION	protein_coding	-	CCDS49475.1	5	311	0	0.42	1.5	190.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095280	Gm21738	ENSMUST00000177817	ENSMUSP00000137127	TRANSLATION	protein_coding	stop	-	5	227	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000021913	Ogdhl	ENSMUST00000228286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021913	Ogdhl	ENSMUST00000022480	ENSMUSP00000022480	TRANSLATION	protein_coding	-	CCDS36866.1	5	1029	20	14.05	0.5	747.5	0	-4,0	-	-	17.172	PRINCIPAL:2
ENSMUSG00000021913	Ogdhl	ENSMUST00000228529	ENSMUSP00000154185	TRANSLATION	protein_coding	-	-	-	1010	20	14.465	2.7	747.5	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000014725	Adam28	ENSMUST00000225767	ENSMUSP00000155362	TRANSLATION	protein_coding	-	-	-	41	0	0	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000014725	Adam28	ENSMUST00000022642	ENSMUSP00000022642	TRANSLATION	protein_coding	-	CCDS36965.1	1	793	20	9.7	0.5	484	2	4,-1	-	-	18	PRINCIPAL:4
ENSMUSG00000014725	Adam28	ENSMUST00000230006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014725	Adam28	ENSMUST00000224039	ENSMUSP00000153354	TRANSLATION	protein_coding	-	-	-	768	20	9.7	0.5	484	2	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000014725	Adam28	ENSMUST00000111072	ENSMUSP00000106701	TRANSLATION	protein_coding	-	CCDS36964.1	1	774	20	9.7	0.5	484	2	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000014725	Adam28	ENSMUST00000224131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048279	Sacs	ENSMUST00000119509	ENSMUSP00000113007	TRANSLATION	protein_coding	-	-	5	744	10	0	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048279	Sacs	ENSMUST00000150222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048279	Sacs	ENSMUST00000227570	ENSMUSP00000154300	TRANSLATION	nonsense_mediated_decay	-	-	-	137	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048279	Sacs	ENSMUST00000119943	ENSMUSP00000113377	TRANSLATION	protein_coding	-	-	5	4582	10	0	1.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000048279	Sacs	ENSMUST00000121091	ENSMUSP00000113925	TRANSLATION	protein_coding	-	-	1	745	10	0	0	0	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000048279	Sacs	ENSMUST00000089394	ENSMUSP00000086816	TRANSLATION	protein_coding	-	CCDS27180.1	1	768	10	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000048279	Sacs	ENSMUST00000229692	ENSMUSP00000155783	TRANSLATION	protein_coding	start/stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094220	Trav6-3	ENSMUST00000180549	ENSMUSP00000137964	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.3	0	40.1	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094220	Trav6-3	ENSMUST00000183604	ENSMUSP00000138968	TRANSLATION	TR_V_gene	start/stop	-	-	101	0	1	0	40.1	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000043157	Arl11	ENSMUST00000224727	ENSMUSP00000153531	TRANSLATION	protein_coding	-	CCDS27182.1	-	176	17	1	1.5	183.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000043157	Arl11	ENSMUST00000055159	ENSMUSP00000055447	TRANSLATION	protein_coding	-	CCDS27182.1	1	176	17	1	1.5	183.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000040997	Abhd4	ENSMUST00000197807	ENSMUSP00000142607	TRANSLATION	nonsense_mediated_decay	start	-	5	56	0	0.54	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040997	Abhd4	ENSMUST00000197802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040997	Abhd4	ENSMUST00000196699	ENSMUSP00000143121	TRANSLATION	nonsense_mediated_decay	-	-	3	85	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040997	Abhd4	ENSMUST00000239403	ENSMUSP00000159351	TRANSLATION	protein_coding	-	CCDS56954.1	-	355	7	5.11	3.9	85.7	0	-4,-6	-	-	19.038	MINOR
ENSMUSG00000040997	Abhd4	ENSMUST00000041197	ENSMUSP00000044134	TRANSLATION	protein_coding	-	-	1	342	7	5.11	9.1	86.2	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000040997	Abhd4	ENSMUST00000199068	ENSMUSP00000142423	TRANSLATION	protein_coding	start	-	5	231	1	2.21	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040997	Abhd4	ENSMUST00000180359	ENSMUSP00000137214	TRANSLATION	protein_coding	-	CCDS56955.1	1	318	7	5.11	8.8	86.2	0	-4,-7	-	-	20.889	PRINCIPAL:2
ENSMUSG00000040997	Abhd4	ENSMUST00000199338	ENSMUSP00000143600	TRANSLATION	protein_coding	-	-	3	84	1	0.96	0	0	0	-4,-2	-	-	0.858	MINOR
ENSMUSG00000040997	Abhd4	ENSMUST00000197605	ENSMUSP00000142722	TRANSLATION	protein_coding	stop	-	3	189	6	3.28	0	86	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043702	Pde12	ENSMUST00000052932	ENSMUSP00000059666	TRANSLATION	protein_coding	-	CCDS26882.1	1	608	7	2.75	4.1	62.7	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000076887	Traj43	ENSMUST00000103699	ENSMUSP00000142598	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000061068	Mcpt4	ENSMUST00000043249	ENSMUSP00000038103	TRANSLATION	protein_coding	-	CCDS27140.1	1	246	8	4.2	1.5	210.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000054763	Defb42	ENSMUST00000142140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054763	Defb42	ENSMUST00000111203	ENSMUSP00000106834	TRANSLATION	protein_coding	-	CCDS36948.1	3	75	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000054763	Defb42	ENSMUST00000138708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054763	Defb42	ENSMUST00000186438	ENSMUSP00000140494	TRANSLATION	protein_coding	start	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054763	Defb42	ENSMUST00000067990	ENSMUSP00000070629	TRANSLATION	protein_coding	-	CCDS36948.1	1	75	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000022108	Itm2b	ENSMUST00000226722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022108	Itm2b	ENSMUST00000227454	ENSMUSP00000153948	TRANSLATION	protein_coding	stop	-	-	144	0	0	0	53.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000022108	Itm2b	ENSMUST00000022704	ENSMUSP00000022704	TRANSLATION	protein_coding	-	CCDS27269.1	1	266	0	0	7.6	72.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000022108	Itm2b	ENSMUST00000228637	ENSMUSP00000154011	TRANSLATION	protein_coding	-	-	-	40	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022108	Itm2b	ENSMUST00000228707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021749	Oit1	ENSMUST00000022269	ENSMUSP00000022269	TRANSLATION	protein_coding	-	CCDS36802.1	1	223	0	3.81	2.7	96.8	1	-1,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000021749	Oit1	ENSMUST00000224529	ENSMUSP00000153041	TRANSLATION	protein_coding	stop	-	-	30	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000096106	Trav5d-4	ENSMUST00000179701	ENSMUSP00000136664	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	63.5	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000022048	Dpysl2	ENSMUST00000022629	ENSMUSP00000022629	TRANSLATION	protein_coding	-	CCDS27224.1	1	572	2	12.5	17.5	177.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022016	Akap11	ENSMUST00000226416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022016	Akap11	ENSMUST00000227808	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022016	Akap11	ENSMUST00000123853	ENSMUSP00000116015	TRANSLATION	protein_coding	-	CCDS49549.1	5	1894	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000022016	Akap11	ENSMUST00000227722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094792	Trav10d	ENSMUST00000103646	ENSMUSP00000100423	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	62.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000017485	Top2b	ENSMUST00000161693	ENSMUSP00000123992	TRANSLATION	protein_coding	start/stop	-	5	348	0	3.25	0	40.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000017485	Top2b	ENSMUST00000163032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017485	Top2b	ENSMUST00000159987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017485	Top2b	ENSMUST00000224695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017485	Top2b	ENSMUST00000017629	ENSMUSP00000017629	TRANSLATION	protein_coding	-	CCDS26833.1	1	1612	25	27.2	1.5	894.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000017485	Top2b	ENSMUST00000159302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000017485	Top2b	ENSMUST00000224460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017485	Top2b	ENSMUST00000160501	ENSMUSP00000124889	TRANSLATION	protein_coding	start/stop	-	3	230	0	4	0	153.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104629	Trav13n-1	ENSMUST00000198359	ENSMUSP00000142913	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	54.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000094706	Gm10338	ENSMUST00000178623	ENSMUSP00000137328	TRANSLATION	protein_coding	stop	-	5	204	0	0	0.5	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094706	Gm10338	ENSMUST00000096148	ENSMUSP00000093862	TRANSLATION	protein_coding	-	-	2	204	0	0	0.5	76.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015437	Gzmb	ENSMUST00000015581	ENSMUSP00000015581	TRANSLATION	protein_coding	-	CCDS27147.1	1	247	7	4.3	0.5	227.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000063895	Nupl1	ENSMUST00000225805	ENSMUSP00000153642	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	532	0	12.08	0	868.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000096551	Trav10	ENSMUST00000103583	ENSMUSP00000100360	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	62.7	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000076908	Traj21	ENSMUST00000103720	ENSMUSP00000143434	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000072726	Gm5797	ENSMUST00000100886	ENSMUSP00000098446	TRANSLATION	protein_coding	-	CCDS49399.1	1	204	0	0	0.5	69.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093833	Gm7970	ENSMUST00000167615	ENSMUSP00000125877	TRANSLATION	protein_coding	start	-	5	213	0	0	0	88.3	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000094766	Trav7-4	ENSMUST00000181728	ENSMUSP00000137912	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	1	68.6	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000035296	Sgcg	ENSMUST00000077954	ENSMUSP00000077106	TRANSLATION	protein_coding	-	CCDS27181.1	1	291	0	0	12.8	261	1	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000035296	Sgcg	ENSMUST00000129886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035296	Sgcg	ENSMUST00000121148	ENSMUSP00000112576	TRANSLATION	protein_coding	-	CCDS27181.1	1	291	0	0	12.8	261	1	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000021803	Cdhr1	ENSMUST00000022337	ENSMUSP00000022337	TRANSLATION	protein_coding	-	CCDS26952.1	1	859	36	10.7	1.5	224.5	0	4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000095533	Gm10413	ENSMUST00000112728	ENSMUSP00000108348	TRANSLATION	protein_coding	start	-	1	225	0	0	0	76.5	0	-1,-4	-	-	-1	PRINCIPAL:3
ENSMUSG00000095533	Gm10413	ENSMUST00000177913	ENSMUSP00000136345	TRANSLATION	protein_coding	stop	-	2	204	0	0	0.5	76.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022023	Wbp4	ENSMUST00000228161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022023	Wbp4	ENSMUST00000228105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022023	Wbp4	ENSMUST00000227584	ENSMUSP00000154101	TRANSLATION	nonsense_mediated_decay	-	-	-	315	0	1.85	0	132.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022023	Wbp4	ENSMUST00000022601	ENSMUSP00000022601	TRANSLATION	protein_coding	-	CCDS27300.1	1	376	0	1.85	1.5	132.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025545	Clybl	ENSMUST00000026625	ENSMUSP00000026625	TRANSLATION	protein_coding	-	CCDS27346.1	1	338	7	4.72	1.5	165.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000025545	Clybl	ENSMUST00000226136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095743	Gm17654	ENSMUST00000166110	ENSMUSP00000130744	TRANSLATION	protein_coding	start	-	5	209	0	0	0	86.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000093948	Gm10378	ENSMUST00000166527	ENSMUSP00000127886	TRANSLATION	protein_coding	start	-	5	160	0	0	0	82.8	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000093948	Gm10378	ENSMUST00000100696	ENSMUSP00000098261	TRANSLATION	protein_coding	start/stop	-	5	143	0	0	0	82.8	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000033060	Lmo7	ENSMUST00000159806	ENSMUSP00000124300	TRANSLATION	protein_coding	start	-	5	1189	8	2	0	241	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033060	Lmo7	ENSMUST00000159812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033060	Lmo7	ENSMUST00000159850	ENSMUSP00000159141	TRANSLATION	protein_coding	start	-	5	188	8	0	0	36.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033060	Lmo7	ENSMUST00000159154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033060	Lmo7	ENSMUST00000162091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033060	Lmo7	ENSMUST00000159314	ENSMUSP00000124349	TRANSLATION	protein_coding	-	CCDS84158.1	1	1453	0	2	0.5	231.1	0	-4,-5	-	-	0.678	MINOR
ENSMUSG00000033060	Lmo7	ENSMUST00000159797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033060	Lmo7	ENSMUST00000159948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033060	Lmo7	ENSMUST00000161668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033060	Lmo7	ENSMUST00000160876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033060	Lmo7	ENSMUST00000160038	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033060	Lmo7	ENSMUST00000100337	ENSMUSP00000097910	TRANSLATION	protein_coding	-	CCDS37001.1	1	1699	8	5.044	0.5	319.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033060	Lmo7	ENSMUST00000159026	ENSMUSP00000124605	TRANSLATION	protein_coding	stop	-	1	471	0	0	0	167.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033060	Lmo7	ENSMUST00000159597	ENSMUSP00000123706	TRANSLATION	protein_coding	start	-	5	1604	8	2	0	267.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033060	Lmo7	ENSMUST00000159769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033060	Lmo7	ENSMUST00000159258	ENSMUSP00000125465	TRANSLATION	nonsense_mediated_decay	-	-	1	422	0	0	0	50.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021969	Zdhhc20	ENSMUST00000226029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021969	Zdhhc20	ENSMUST00000226057	ENSMUSP00000153568	TRANSLATION	protein_coding	-	-	-	380	5	0	0	136.7	4	-1,-5	-	-	10.886	MINOR
ENSMUSG00000021969	Zdhhc20	ENSMUST00000089473	ENSMUSP00000086900	TRANSLATION	protein_coding	-	CCDS27162.1	1	368	5	0	5.3	138.6	4	-1,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021969	Zdhhc20	ENSMUST00000224133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021969	Zdhhc20	ENSMUST00000225955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094914	Trav9d-2	ENSMUST00000199746	ENSMUSP00000142463	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	59.7	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094914	Trav9d-2	ENSMUST00000178824	ENSMUSP00000136004	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	59.7	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076800	Trav6n-5	ENSMUST00000103611	ENSMUSP00000100388	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.3	0	52.5	0	1,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000076883	Traj48	ENSMUST00000200046	ENSMUSP00000143469	TRANSLATION	TR_J_gene	start/stop	-	-	20	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000076883	Traj48	ENSMUST00000103695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040701	Ap1g2	ENSMUST00000153702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040701	Ap1g2	ENSMUST00000133004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040701	Ap1g2	ENSMUST00000144197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040701	Ap1g2	ENSMUST00000139536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040701	Ap1g2	ENSMUST00000137481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040701	Ap1g2	ENSMUST00000036041	ENSMUSP00000043996	TRANSLATION	protein_coding	-	CCDS36929.1	1	791	0	18.27	0.5	599.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040701	Ap1g2	ENSMUST00000127870	ENSMUSP00000116698	TRANSLATION	nonsense_mediated_decay	-	-	1	235	0	4	0	185.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040701	Ap1g2	ENSMUST00000137548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040701	Ap1g2	ENSMUST00000151314	ENSMUSP00000122796	TRANSLATION	nonsense_mediated_decay	-	-	1	235	0	4	0	185.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040701	Ap1g2	ENSMUST00000170285	ENSMUSP00000128427	TRANSLATION	protein_coding	-	CCDS36929.1	5	791	0	18.27	0.5	599.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040701	Ap1g2	ENSMUST00000131323	ENSMUSP00000115441	TRANSLATION	nonsense_mediated_decay	-	-	2	235	0	4	0	185.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041445	Mmrn2	ENSMUST00000227130	ENSMUSP00000153972	TRANSLATION	protein_coding	start/stop	-	-	173	0	0	0	31	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041445	Mmrn2	ENSMUST00000111908	ENSMUSP00000107539	TRANSLATION	protein_coding	-	CCDS36876.1	1	943	0	0.48	0.5	134.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034327	Kctd9	ENSMUST00000150768	ENSMUSP00000114489	TRANSLATION	protein_coding	-	CCDS49531.1	5	389	0	7.91	12.3	245.1	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000034327	Kctd9	ENSMUST00000078053	ENSMUSP00000077200	TRANSLATION	protein_coding	-	CCDS27230.2	1	339	0	6.91	3.5	187.4	0	-4,-2	-	-	7.424	MINOR
ENSMUSG00000034327	Kctd9	ENSMUST00000125212	ENSMUSP00000116807	TRANSLATION	protein_coding	stop	-	5	10	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034327	Kctd9	ENSMUST00000156700	ENSMUSP00000115002	TRANSLATION	nonsense_mediated_decay	-	-	2	135	0	1	0	67.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034327	Kctd9	ENSMUST00000145542	ENSMUSP00000122956	TRANSLATION	protein_coding	stop	-	5	40	0	1.33	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034327	Kctd9	ENSMUST00000152243	ENSMUSP00000120440	TRANSLATION	protein_coding	-	-	2	245	0	5.78	0	107.1	0	-4,-6	-	-	1.74	MINOR
ENSMUSG00000040770	Il25	ENSMUST00000037863	ENSMUSP00000039641	TRANSLATION	protein_coding	-	CCDS36926.1	1	169	0	0.62	2.7	72.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000059887	Olfr1507	ENSMUST00000206069	ENSMUSP00000145718	TRANSLATION	protein_coding	stop	-	2	78	0	0.6	0	52.9	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000059887	Olfr1507	ENSMUST00000206931	ENSMUSP00000145728	TRANSLATION	protein_coding	stop	-	2	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059887	Olfr1507	ENSMUST00000073571	ENSMUSP00000073260	TRANSLATION	protein_coding	-	CCDS27062.1	-	313	0	1.958	7.6	161.2	10	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059887	Olfr1507	ENSMUST00000206062	ENSMUSP00000146152	TRANSLATION	protein_coding	-	CCDS27062.1	2	313	0	1.958	7.6	161.2	10	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059887	Olfr1507	ENSMUST00000205963	ENSMUSP00000145923	TRANSLATION	protein_coding	stop	-	2	127	0	1.4	0	99.2	6	-1,-5	-	-	-1	MINOR
ENSMUSG00000072473	1700024G13Rik	ENSMUST00000100723	ENSMUSP00000098289	TRANSLATION	protein_coding	-	CCDS36867.1	1	93	0	0	12	139.4	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000022098	Bmp1	ENSMUST00000228501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022098	Bmp1	ENSMUST00000022693	ENSMUSP00000022693	TRANSLATION	protein_coding	-	CCDS36972.1	1	991	26	14.8	1.5	935.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022098	Bmp1	ENSMUST00000226906	ENSMUSP00000154610	TRANSLATION	nonsense_mediated_decay	-	-	-	194	0	2.1	0	45.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022098	Bmp1	ENSMUST00000226539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022098	Bmp1	ENSMUST00000226601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022098	Bmp1	ENSMUST00000226246	ENSMUSP00000154104	TRANSLATION	nonsense_mediated_decay	-	-	-	194	0	2.1	0	45.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022098	Bmp1	ENSMUST00000227944	ENSMUSP00000154121	TRANSLATION	nonsense_mediated_decay	start	-	-	57	0	1.5	0	43	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000034194	R3hcc1	ENSMUST00000138326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034194	R3hcc1	ENSMUST00000121142	ENSMUSP00000113898	TRANSLATION	protein_coding	-	-	1	488	0	0	0.5	56.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034194	R3hcc1	ENSMUST00000128747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034194	R3hcc1	ENSMUST00000147609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034194	R3hcc1	ENSMUST00000118374	ENSMUSP00000113450	TRANSLATION	protein_coding	-	-	1	488	0	0	0.5	56.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022227	Mcpt1	ENSMUST00000022836	ENSMUSP00000022836	TRANSLATION	protein_coding	-	CCDS27137.1	1	246	12	4	1.5	209	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000090166	Ear10	ENSMUST00000163652	ENSMUSP00000130933	TRANSLATION	protein_coding	-	CCDS26965.1	-	156	5	1	0.5	113.6	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000090166	Ear10	ENSMUST00000159175	ENSMUSP00000123872	TRANSLATION	protein_coding	-	CCDS26965.1	1	156	5	1	0.5	113.6	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000075574	Defb48	ENSMUST00000100493	ENSMUSP00000098062	TRANSLATION	protein_coding	-	CCDS36944.1	1	87	0	0	0.5	24.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000033487	Fndc3a	ENSMUST00000089017	ENSMUSP00000086411	TRANSLATION	protein_coding	-	CCDS27264.1	1	1198	0	14.85	7.5	248.8	1	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000033487	Fndc3a	ENSMUST00000162922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033487	Fndc3a	ENSMUST00000162478	ENSMUSP00000124637	TRANSLATION	protein_coding	stop	-	5	540	0	6.5	0	92.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033487	Fndc3a	ENSMUST00000162825	ENSMUSP00000124218	TRANSLATION	protein_coding	start	-	5	1154	0	14.85	0	248.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000033487	Fndc3a	ENSMUST00000161550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033487	Fndc3a	ENSMUST00000159144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033487	Fndc3a	ENSMUST00000163013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072596	Ear2	ENSMUST00000074839	ENSMUSP00000074386	TRANSLATION	protein_coding	-	CCDS26968.1	1	156	5	1	0.5	115.1	0	4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000004561	Mettl17	ENSMUST00000164801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000168409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000168413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000169019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000170887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000077846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000167984	ENSMUSP00000126425	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004561	Mettl17	ENSMUST00000168217	ENSMUSP00000130565	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000004561	Mettl17	ENSMUST00000166408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000164902	ENSMUSP00000130200	TRANSLATION	protein_coding	-	-	5	486	22	0	0	197	0	-2,2	-	-	11.406	MINOR
ENSMUSG00000004561	Mettl17	ENSMUST00000165150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000047899	ENSMUSP00000047720	TRANSLATION	protein_coding	-	CCDS36913.1	1	461	22	0	1.7	206.9	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000004561	Mettl17	ENSMUST00000164252	ENSMUSP00000130038	TRANSLATION	nonsense_mediated_decay	-	-	1	236	10	0	0	59.1	0	-2,2	-	-	-1	MINOR
ENSMUSG00000004561	Mettl17	ENSMUST00000165100	ENSMUSP00000132354	TRANSLATION	nonsense_mediated_decay	-	-	1	236	10	0	0	59.1	0	-2,2	-	-	-1	MINOR
ENSMUSG00000004561	Mettl17	ENSMUST00000163603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004561	Mettl17	ENSMUST00000165568	ENSMUSP00000129973	TRANSLATION	protein_coding	start/stop	-	5	280	22	0	0	118.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022053	Ebf2	ENSMUST00000022637	ENSMUSP00000022637	TRANSLATION	protein_coding	-	CCDS27228.1	1	575	4	10.6	15	613.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022053	Ebf2	ENSMUST00000176029	ENSMUSP00000135782	TRANSLATION	protein_coding	-	CCDS27228.1	1	575	4	10.6	15	613.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022053	Ebf2	ENSMUST00000176161	ENSMUSP00000135500	TRANSLATION	protein_coding	-	CCDS27228.1	1	575	4	10.6	15	613.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022053	Ebf2	ENSMUST00000177231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079244	Gm5622	ENSMUST00000096170	ENSMUSP00000093884	TRANSLATION	protein_coding	-	CCDS49483.1	1	167	0	0	0.5	55.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021901	Bap1	ENSMUST00000022458	ENSMUSP00000022458	TRANSLATION	protein_coding	-	CCDS26910.1	1	728	4	4.88	7.6	232.9	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000021901	Bap1	ENSMUST00000190788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021901	Bap1	ENSMUST00000189834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021901	Bap1	ENSMUST00000185987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021901	Bap1	ENSMUST00000188714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021901	Bap1	ENSMUST00000188453	ENSMUSP00000139824	TRANSLATION	nonsense_mediated_decay	-	-	3	146	2	2.39	0	140.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021901	Bap1	ENSMUST00000185700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021901	Bap1	ENSMUST00000187156	ENSMUSP00000139903	TRANSLATION	nonsense_mediated_decay	start	-	3	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000076855	Trav16	ENSMUST00000103667	ENSMUSP00000100444	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.4	0	61.2	0	2,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000046204	Pnma2	ENSMUST00000168010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046204	Pnma2	ENSMUST00000122431	ENSMUSP00000112629	TRANSLATION	protein_coding	-	CCDS27226.1	1	365	0	0	1.5	389	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046204	Pnma2	ENSMUST00000165831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046204	Pnma2	ENSMUST00000089236	ENSMUSP00000086646	TRANSLATION	protein_coding	-	CCDS27226.1	1	365	0	0	1.5	389	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022039	Adam2	ENSMUST00000022618	ENSMUSP00000022618	TRANSLATION	protein_coding	-	CCDS36959.1	1	735	14	7.59	1.5	469.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022039	Adam2	ENSMUST00000225667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022180	Slc7a8	ENSMUST00000226646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022180	Slc7a8	ENSMUST00000022787	ENSMUSP00000022787	TRANSLATION	protein_coding	-	CCDS27101.1	1	531	0	3.64	1.5	131.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022008	Gpalpp1	ENSMUST00000022585	ENSMUSP00000022585	TRANSLATION	protein_coding	-	CCDS27283.1	1	346	0	0	1.5	94.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090379	Gm8229	ENSMUST00000168161	ENSMUSP00000132728	TRANSLATION	protein_coding	start	-	5	213	0	0	0	91.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022120	Rnf219	ENSMUST00000227640	ENSMUSP00000154694	TRANSLATION	protein_coding	-	-	-	235	7	1.83	0	31.4	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000022120	Rnf219	ENSMUST00000228210	ENSMUSP00000153932	TRANSLATION	nonsense_mediated_decay	-	-	-	59	2	0.6	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022120	Rnf219	ENSMUST00000022716	ENSMUSP00000022716	TRANSLATION	protein_coding	-	CCDS27320.1	3	722	7	1.83	0.5	31.4	0	-3,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000022120	Rnf219	ENSMUST00000228448	ENSMUSP00000154655	TRANSLATION	protein_coding	-	-	-	214	7	1.83	0.5	31.4	0	-3,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000072675	Duxbl2	ENSMUST00000173617	ENSMUSP00000134235	TRANSLATION	protein_coding	stop	-	3	76	0	1.498	0	54.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072675	Duxbl2	ENSMUST00000174564	ENSMUSP00000133830	TRANSLATION	protein_coding	stop	-	3	189	0	2.698	0	119.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072675	Duxbl2	ENSMUST00000172861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072675	Duxbl2	ENSMUST00000172038	ENSMUSP00000128018	TRANSLATION	protein_coding	-	-	1	201	0	2.298	0	92.1	0	-4,-7	-	-	9.45	MINOR
ENSMUSG00000072675	Duxbl2	ENSMUST00000174012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072675	Duxbl2	ENSMUST00000100810	ENSMUSP00000098373	TRANSLATION	protein_coding	-	CCDS49424.1	1	350	0	2.698	0.5	119.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071347	C1qtnf9	ENSMUST00000025940	ENSMUSP00000025940	TRANSLATION	protein_coding	-	CCDS27178.1	1	333	0	1.3	8.8	200.7	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000021974	Fgf9	ENSMUST00000022545	ENSMUSP00000022545	TRANSLATION	protein_coding	-	CCDS27164.1	1	208	7	3.83	13.7	160	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000021974	Fgf9	ENSMUST00000074654	ENSMUSP00000088143	TRANSLATION	protein_coding	-	-	1	91	6	2.08	0	82.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000021974	Fgf9	ENSMUST00000166770	ENSMUSP00000130066	TRANSLATION	protein_coding	stop	-	3	30	0	1.08	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021974	Fgf9	ENSMUST00000165526	ENSMUSP00000131358	TRANSLATION	protein_coding	-	-	1	91	6	2.08	0	82.6	0	-4,-5	-	-	9	MINOR
ENSMUSG00000094715	Gm17078	ENSMUST00000167617	ENSMUSP00000137655	TRANSLATION	protein_coding	-	-	5	211	0	0	0	89.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040726	Hesx1	ENSMUST00000035433	ENSMUSP00000041999	TRANSLATION	protein_coding	-	CCDS26884.1	1	185	0	2.4	5.1	82.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000040726	Hesx1	ENSMUST00000224331	ENSMUSP00000152952	TRANSLATION	protein_coding	-	CCDS26884.1	-	185	0	2.4	5.1	82.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000021782	Dlg5	ENSMUST00000073687	ENSMUSP00000073367	TRANSLATION	protein_coding	-	CCDS49416.1	1	1898	0	12.544	1.7	362.4	0	-4,-6	-	-	12.326	MINOR
ENSMUSG00000021782	Dlg5	ENSMUST00000170112	ENSMUSP00000128735	TRANSLATION	nonsense_mediated_decay	start	-	3	72	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021782	Dlg5	ENSMUST00000169880	ENSMUSP00000131986	TRANSLATION	protein_coding	start/stop	-	3	205	0	0	0	112.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021782	Dlg5	ENSMUST00000164638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021782	Dlg5	ENSMUST00000090398	ENSMUSP00000087879	TRANSLATION	protein_coding	-	CCDS49417.1	1	1921	0	12.544	5.3	362.4	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000021782	Dlg5	ENSMUST00000042009	ENSMUSP00000044852	TRANSLATION	protein_coding	start	-	1	1572	0	12.544	0	248.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021782	Dlg5	ENSMUST00000166007	ENSMUSP00000127054	TRANSLATION	protein_coding	start	-	1	228	0	2.14	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021782	Dlg5	ENSMUST00000167343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034532	Fbxo16	ENSMUST00000226005	ENSMUSP00000153094	TRANSLATION	protein_coding	-	-	-	289	0	0.8	1.5	37.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034532	Fbxo16	ENSMUST00000169656	ENSMUSP00000130805	TRANSLATION	protein_coding	-	-	1	308	0	0.8	0	37.7	0	-4,-5	-	-	11.97	ALTERNATIVE:2
ENSMUSG00000034532	Fbxo16	ENSMUST00000224629	ENSMUSP00000153015	TRANSLATION	protein_coding	-	CCDS36956.1	-	334	0	0.8	1.5	37.7	0	-4,-5	-	-	11.97	PRINCIPAL:2
ENSMUSG00000034532	Fbxo16	ENSMUST00000223608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022074	Tnfrsf10b	ENSMUST00000224533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022074	Tnfrsf10b	ENSMUST00000022663	ENSMUSP00000022663	TRANSLATION	protein_coding	-	CCDS27243.1	1	381	0	2.6	0.5	126.4	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022074	Tnfrsf10b	ENSMUST00000224235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060012	Kif13b	ENSMUST00000224507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060012	Kif13b	ENSMUST00000224677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060012	Kif13b	ENSMUST00000100473	ENSMUSP00000098041	TRANSLATION	protein_coding	-	CCDS36954.1	5	1843	11	17.36	0.5	740.7	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000060012	Kif13b	ENSMUST00000224503	ENSMUSP00000153168	TRANSLATION	protein_coding	-	-	-	1847	11	17.36	0.5	740.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000060012	Kif13b	ENSMUST00000224126	ENSMUSP00000153252	TRANSLATION	protein_coding	stop	-	-	151	7	3.83	0	169	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060012	Kif13b	ENSMUST00000231130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022199	Slc22a17	ENSMUST00000228588	ENSMUSP00000154469	TRANSLATION	nonsense_mediated_decay	start	-	-	209	0	0.18	0	0	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000022199	Slc22a17	ENSMUST00000228495	ENSMUSP00000154165	TRANSLATION	protein_coding	-	-	-	627	0	1.14	0	66.2	20	-4,-5	-	-	11.028	ALTERNATIVE:2
ENSMUSG00000022199	Slc22a17	ENSMUST00000226456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022199	Slc22a17	ENSMUST00000226718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022199	Slc22a17	ENSMUST00000228119	ENSMUSP00000154217	TRANSLATION	protein_coding	-	-	-	626	0	1.14	0	66.2	20	-4,-5	-	-	11.028	ALTERNATIVE:2
ENSMUSG00000022199	Slc22a17	ENSMUST00000227600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022199	Slc22a17	ENSMUST00000226467	ENSMUSP00000153789	TRANSLATION	nonsense_mediated_decay	start	-	-	418	0	1.36	0	54.2	15	1,-2	-	-	-1	MINOR
ENSMUSG00000022199	Slc22a17	ENSMUST00000227880	ENSMUSP00000153800	TRANSLATION	nonsense_mediated_decay	-	-	-	240	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022199	Slc22a17	ENSMUST00000050772	ENSMUSP00000049676	TRANSLATION	protein_coding	-	CCDS36924.1	1	401	0	1.14	0.5	57.2	20	1,-5	-	-	10.212	PRINCIPAL:2
ENSMUSG00000022199	Slc22a17	ENSMUST00000228249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022199	Slc22a17	ENSMUST00000231305	ENSMUSP00000155879	TRANSLATION	protein_coding	-	-	-	240	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022199	Slc22a17	ENSMUST00000226690	ENSMUSP00000154681	TRANSLATION	nonsense_mediated_decay	start	-	-	198	0	0.88	0	23.6	10	2,-3	-	-	-1	MINOR
ENSMUSG00000094140	Olfr1512	ENSMUST00000071221	ENSMUSP00000071208	TRANSLATION	protein_coding	-	CCDS27056.1	-	313	0	0.2	7.6	163.6	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000094140	Olfr1512	ENSMUST00000214980	ENSMUSP00000149717	TRANSLATION	protein_coding	-	CCDS27056.1	5	313	0	0.2	7.6	163.6	7	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000037526	Atg14	ENSMUST00000227971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037526	Atg14	ENSMUST00000226299	ENSMUSP00000153718	TRANSLATION	protein_coding	-	CCDS26989.1	-	492	4	0	8.8	257.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000037526	Atg14	ENSMUST00000042988	ENSMUSP00000039047	TRANSLATION	protein_coding	-	CCDS26989.1	1	492	4	0	8.8	257.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000037526	Atg14	ENSMUST00000228784	ENSMUSP00000154124	TRANSLATION	protein_coding	start	-	-	125	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021958	Pinx1	ENSMUST00000225644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021958	Pinx1	ENSMUST00000225564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021958	Pinx1	ENSMUST00000022528	ENSMUSP00000022528	TRANSLATION	protein_coding	-	CCDS27205.1	1	332	0	0	1.5	57.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096827	Trav14n-1	ENSMUST00000196639	ENSMUSP00000143569	TRANSLATION	TR_V_gene	stop	-	-	121	0	1	0	66.6	0	3,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000096827	Trav14n-1	ENSMUST00000177578	ENSMUSP00000137036	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	66.6	0	-3,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000021733	Slc4a7	ENSMUST00000057015	ENSMUSP00000058313	TRANSLATION	protein_coding	-	CCDS36810.1	1	1131	0	13.0484	5.2	1164.6	20	-4,-5	-	-	13.1	PRINCIPAL:2
ENSMUSG00000021733	Slc4a7	ENSMUST00000226079	ENSMUSP00000153323	TRANSLATION	protein_coding	-	-	-	1095	0	13.0484	4.2	1164.6	20	-4,-5	-	-	12.624	ALTERNATIVE:2
ENSMUSG00000021733	Slc4a7	ENSMUST00000223771	ENSMUSP00000153532	TRANSLATION	nonsense_mediated_decay	start	-	-	88	0	1.75	0	142.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000224752	ENSMUSP00000153185	TRANSLATION	protein_coding	-	-	-	1212	0	13.0084	0	1152	20	-4,-5	-	-	10.266	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000223981	ENSMUSP00000153084	TRANSLATION	protein_coding	-	-	-	1220	0	13.0484	1.5	1155.3	20	-4,-5	-	-	10.78	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225630	ENSMUSP00000153597	TRANSLATION	protein_coding	-	-	-	1118	0	13.0084	4	1155.5	20	-4,-5	-	-	11.904	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000224672	ENSMUSP00000152950	TRANSLATION	protein_coding	-	-	-	1200	0	13.0084	0	1152.1	20	-4,-5	-	-	10.272	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000223761	ENSMUSP00000153045	TRANSLATION	protein_coding	-	-	-	1254	0	13.0484	2.7	1155.3	20	-4,-5	-	-	11.352	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225238	ENSMUSP00000152984	TRANSLATION	protein_coding	-	-	-	1151	0	13.4984	1.8	1157.8	20	-4,-5	-	-	11.972	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000224049	ENSMUSP00000153093	TRANSLATION	protein_coding	-	-	-	1113	0	13.0084	2.4	1155.5	20	-4,-5	-	-	11.142	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000223695	ENSMUSP00000153648	TRANSLATION	protein_coding	-	-	-	1133	0	13.4584	0	1155.9	20	-4,-5	-	-	11.4	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225232	ENSMUSP00000153280	TRANSLATION	protein_coding	stop	-	-	932	0	11.5304	0	865.8	18	-4,-5	-	-	-1	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000224222	ENSMUSP00000153116	TRANSLATION	protein_coding	-	-	-	1248	0	13.0084	0	1152	20	-4,-5	-	-	10.266	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000224750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000224197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000224333	ENSMUSP00000153470	TRANSLATION	protein_coding	-	-	-	1215	0	13.0484	2.4	1155.3	20	-4,-5	-	-	11.208	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000223607	ENSMUSP00000153180	TRANSLATION	protein_coding	-	-	-	1243	0	13.0084	2.8	1152	20	-4,-5	-	-	11.124	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000225496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000225175	ENSMUSP00000153166	TRANSLATION	protein_coding	-	-	-	1205	0	13.0084	1.8	1152.1	20	-4,-5	-	-	10.652	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021733	Slc4a7	ENSMUST00000223740	ENSMUSP00000152933	TRANSLATION	protein_coding	-	-	-	1126	0	13.0484	1.2	1164.6	20	-4,-5	-	-	11.196	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000225979	ENSMUSP00000153690	TRANSLATION	protein_coding	-	-	-	1138	0	13.4584	1.8	1155.9	20	-4,-5	-	-	11.78	MINOR
ENSMUSG00000021733	Slc4a7	ENSMUST00000224952	ENSMUSP00000153345	TRANSLATION	protein_coding	-	-	-	1146	0	13.4984	1.2	1157.8	20	-4,-5	-	-	11.688	MINOR
ENSMUSG00000091676	Gm8374	ENSMUST00000163826	ENSMUSP00000128994	TRANSLATION	protein_coding	-	-	5	172	0	0	0	73.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091142	Gm17175	ENSMUST00000172117	ENSMUSP00000127078	TRANSLATION	protein_coding	-	-	5	179	0	0	0	86.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000093954	Gm16867	ENSMUST00000183917	ENSMUSP00000139085	TRANSLATION	nonsense_mediated_decay	-	-	1	78	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000093954	Gm16867	ENSMUST00000180059	ENSMUSP00000137543	TRANSLATION	protein_coding	stop	-	5	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000093954	Gm16867	ENSMUST00000183840	ENSMUSP00000138845	TRANSLATION	nonsense_mediated_decay	-	-	1	108	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000093954	Gm16867	ENSMUST00000179116	ENSMUSP00000135940	TRANSLATION	protein_coding	-	-	1	81	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000093954	Gm16867	ENSMUST00000184039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093954	Gm16867	ENSMUST00000183695	ENSMUSP00000138883	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000093954	Gm16867	ENSMUST00000184816	ENSMUSP00000138904	TRANSLATION	nonsense_mediated_decay	-	-	1	112	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021982	Cdadc1	ENSMUST00000022555	ENSMUSP00000022555	TRANSLATION	protein_coding	-	CCDS49513.1	1	499	6	1.42	0.5	63.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021982	Cdadc1	ENSMUST00000225839	ENSMUSP00000153357	TRANSLATION	protein_coding	-	CCDS49514.1	-	525	6	1.42	1.5	63.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021982	Cdadc1	ENSMUST00000056997	ENSMUSP00000052233	TRANSLATION	protein_coding	-	CCDS36940.1	1	523	6	1.42	1.5	63.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021982	Cdadc1	ENSMUST00000171683	ENSMUSP00000128064	TRANSLATION	protein_coding	-	CCDS49515.1	1	500	6	1.42	1.5	63.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021982	Cdadc1	ENSMUST00000224968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021982	Cdadc1	ENSMUST00000225103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021982	Cdadc1	ENSMUST00000167100	ENSMUSP00000128022	TRANSLATION	protein_coding	-	-	1	497	6	1.42	0.5	63.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021982	Cdadc1	ENSMUST00000223842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094758	Trav13d-2	ENSMUST00000197954	ENSMUSP00000142721	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	50.7	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094758	Trav13d-2	ENSMUST00000103596	ENSMUSP00000100373	TRANSLATION	TR_V_gene	start/stop	-	-	88	0	1	0	50.4	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022220	Adcy4	ENSMUST00000228933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022220	Adcy4	ENSMUST00000226361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022220	Adcy4	ENSMUST00000002398	ENSMUSP00000002398	TRANSLATION	protein_coding	-	CCDS27130.1	1	1077	9	9.62	0.5	585.3	11	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022220	Adcy4	ENSMUST00000227031	ENSMUSP00000153739	TRANSLATION	protein_coding	stop	-	-	49	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000022220	Adcy4	ENSMUST00000170223	ENSMUSP00000130530	TRANSLATION	protein_coding	-	CCDS27130.1	1	1077	9	9.62	0.5	585.3	11	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022220	Adcy4	ENSMUST00000226575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022002	Erich6b	ENSMUST00000022579	ENSMUSP00000022579	TRANSLATION	protein_coding	-	CCDS56969.1	1	220	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022002	Erich6b	ENSMUST00000238633	ENSMUSP00000158673	TRANSLATION	protein_coding	-	-	-	574	0	0	0	188.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000076894	Traj35	ENSMUST00000103706	ENSMUSP00000143307	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021867	Tmem254b	ENSMUST00000184797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021867	Tmem254b	ENSMUST00000183976	ENSMUSP00000138943	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	40.7	1	-1,-6	-	-	-1	MINOR
ENSMUSG00000021867	Tmem254b	ENSMUST00000100806	ENSMUSP00000098369	TRANSLATION	protein_coding	-	CCDS56943.1	1	129	0	0	2.7	123.4	2	-4,-7	-	-	6.786	MINOR
ENSMUSG00000021867	Tmem254b	ENSMUST00000022418	ENSMUSP00000022418	TRANSLATION	protein_coding	-	CCDS56944.1	1	123	0	0	7.5	123.1	2	-1,-5	-	-	8.982	PRINCIPAL:1
ENSMUSG00000091122	Gm8247	ENSMUST00000178759	ENSMUSP00000136003	TRANSLATION	protein_coding	start	-	5	124	0	0	0	30.3	0	-4,-7	-	-	-1	ALTERNATIVE:2
ENSMUSG00000091122	Gm8247	ENSMUST00000170094	ENSMUSP00000132825	TRANSLATION	protein_coding	start	-	5	213	0	0	0	87.2	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000048379	Socs4	ENSMUST00000065562	ENSMUSP00000066031	TRANSLATION	protein_coding	-	CCDS26985.1	1	436	0	2	1.5	142.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048379	Socs4	ENSMUST00000227413	ENSMUSP00000154000	TRANSLATION	protein_coding	stop	-	-	129	0	1	0	67	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000135714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021948	Prkcd	ENSMUST00000112203	ENSMUSP00000107822	TRANSLATION	protein_coding	-	-	1	545	29	7.56	0	324.8	0	-4,-5	-	-	9.078	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000112211	ENSMUSP00000107830	TRANSLATION	protein_coding	-	CCDS79285.1	5	700	30	11.01	0.5	362.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000227078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021948	Prkcd	ENSMUST00000112207	ENSMUSP00000107826	TRANSLATION	protein_coding	-	-	1	559	30	8.5	0	362.4	0	-4,-5	-	-	12.978	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000112202	ENSMUSP00000107821	TRANSLATION	protein_coding	-	-	1	571	29	7.74	0	324.8	0	-4,-5	-	-	9.078	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000140701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021948	Prkcd	ENSMUST00000112206	ENSMUSP00000107825	TRANSLATION	protein_coding	-	-	1	585	30	8.68	0	362.4	0	-4,-5	-	-	13.338	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000145806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021948	Prkcd	ENSMUST00000130736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021948	Prkcd	ENSMUST00000112210	ENSMUSP00000107829	TRANSLATION	protein_coding	-	CCDS26895.1	1	674	30	10.83	6.3	362.4	0	-4,-5	-	-	19.64	PRINCIPAL:1
ENSMUSG00000021948	Prkcd	ENSMUST00000022521	ENSMUSP00000022521	TRANSLATION	protein_coding	-	CCDS79285.1	1	700	30	11.01	0.5	362.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000021948	Prkcd	ENSMUST00000112208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076848	Trav15-2-dv6-2	ENSMUST00000103660	ENSMUSP00000100437	TRANSLATION	TR_V_gene	stop	-	-	123	0	1	0	53.8	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000037544	Dlgap5	ENSMUST00000177822	ENSMUSP00000137382	TRANSLATION	protein_coding	start	-	2	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037544	Dlgap5	ENSMUST00000178661	ENSMUSP00000154283	TRANSLATION	nonsense_mediated_decay	-	-	2	606	0	1.73	0	112.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037544	Dlgap5	ENSMUST00000111778	ENSMUSP00000107408	TRANSLATION	protein_coding	start/stop	-	5	303	0	1.28	0	82.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037544	Dlgap5	ENSMUST00000179392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037544	Dlgap5	ENSMUST00000227174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037544	Dlgap5	ENSMUST00000178773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037544	Dlgap5	ENSMUST00000043296	ENSMUSP00000040416	TRANSLATION	protein_coding	-	CCDS26987.1	1	808	0	1.73	0.5	112.4	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000037544	Dlgap5	ENSMUST00000179465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037544	Dlgap5	ENSMUST00000180299	ENSMUSP00000153953	TRANSLATION	protein_coding	-	-	2	758	0	1.73	0	112.4	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000090764	Gm3127	ENSMUST00000167839	ENSMUSP00000126805	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	67.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090764	Gm3127	ENSMUST00000178386	ENSMUSP00000136188	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	67.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000090764	Gm3127	ENSMUST00000171866	ENSMUSP00000128550	TRANSLATION	protein_coding	-	-	5	263	0	0	0	67.8	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000021936	Mapk8	ENSMUST00000226798	ENSMUSP00000153833	TRANSLATION	nonsense_mediated_decay	-	-	-	40	5	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021936	Mapk8	ENSMUST00000111945	ENSMUSP00000107576	TRANSLATION	protein_coding	-	CCDS36869.1	1	384	19	9.33	9.3	214	0	-4,-6	-	-	18.802	MINOR
ENSMUSG00000021936	Mapk8	ENSMUST00000227306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021936	Mapk8	ENSMUST00000132379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021936	Mapk8	ENSMUST00000111944	ENSMUSP00000107575	TRANSLATION	protein_coding	-	CCDS79295.1	1	427	19	10.33	11.7	214	0	-4,-6	-	-	21.624	ALTERNATIVE:1
ENSMUSG00000021936	Mapk8	ENSMUST00000127143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021936	Mapk8	ENSMUST00000111943	ENSMUSP00000107574	TRANSLATION	protein_coding	-	CCDS84111.1	1	384	19	9.33	10.7	214.6	0	-4,-6	-	-	19.318	MINOR
ENSMUSG00000021936	Mapk8	ENSMUST00000150659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021936	Mapk8	ENSMUST00000111942	ENSMUSP00000107573	TRANSLATION	protein_coding	-	-	5	308	19	7.58	1.2	152.1	0	-4,-6	-	-	8.816	MINOR
ENSMUSG00000021936	Mapk8	ENSMUST00000022504	ENSMUSP00000022504	TRANSLATION	protein_coding	-	CCDS79293.1	1	427	19	10.33	12.7	214.6	0	-4,-6	-	-	22	PRINCIPAL:5
ENSMUSG00000021936	Mapk8	ENSMUST00000130539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002329	Mdp1	ENSMUST00000226659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002329	Mdp1	ENSMUST00000228093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002329	Mdp1	ENSMUST00000002400	ENSMUSP00000002400	TRANSLATION	protein_coding	-	CCDS27123.1	1	164	4	4.75	6.3	197.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000090472	Gm3047	ENSMUST00000164069	ENSMUSP00000132165	TRANSLATION	protein_coding	-	-	5	267	0	0	0	73.1	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000090472	Gm3047	ENSMUST00000177998	ENSMUSP00000136530	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	73.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000076904	Traj25	ENSMUST00000103716	ENSMUSP00000143257	TRANSLATION	TR_J_gene	start/stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025557	Slc15a1	ENSMUST00000227372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025557	Slc15a1	ENSMUST00000088386	ENSMUSP00000085728	TRANSLATION	protein_coding	-	CCDS37017.1	1	709	0	12.475	1.5	498.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040760	Appl1	ENSMUST00000142645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040760	Appl1	ENSMUST00000142261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040760	Appl1	ENSMUST00000141599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040760	Appl1	ENSMUST00000224406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040760	Appl1	ENSMUST00000036570	ENSMUSP00000042875	TRANSLATION	protein_coding	-	CCDS26883.1	1	707	0	14.05	12.8	281.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022013	Dnajc15	ENSMUST00000022590	ENSMUSP00000022590	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022013	Dnajc15	ENSMUST00000226459	ENSMUSP00000154390	TRANSLATION	protein_coding	-	CCDS27292.1	-	149	0	1.95	2.7	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022013	Dnajc15	ENSMUST00000227249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095646	Trav10n	ENSMUST00000103612	ENSMUSP00000100389	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	65.1	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000023243	Kcnk5	ENSMUST00000024011	ENSMUSP00000024011	TRANSLATION	protein_coding	-	CCDS26841.1	1	502	0	3.04	5.1	108.7	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023243	Kcnk5	ENSMUST00000225552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021838	Samd4	ENSMUST00000140571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021838	Samd4	ENSMUST00000141767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021838	Samd4	ENSMUST00000100672	ENSMUSP00000098237	TRANSLATION	protein_coding	-	CCDS26983.1	1	623	0	1.99	0.5	33	0	-4,-6	-	-	11.622	ALTERNATIVE:2
ENSMUSG00000021838	Samd4	ENSMUST00000137543	ENSMUSP00000114621	TRANSLATION	protein_coding	-	CCDS26983.1	1	623	0	1.99	0.5	33	0	-4,-6	-	-	11.622	ALTERNATIVE:2
ENSMUSG00000021838	Samd4	ENSMUST00000228404	ENSMUSP00000153846	TRANSLATION	protein_coding	-	-	-	522	0	1.99	0	33	0	-4,-5	-	-	11.622	ALTERNATIVE:2
ENSMUSG00000021838	Samd4	ENSMUST00000226684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021838	Samd4	ENSMUST00000125113	ENSMUSP00000122833	TRANSLATION	protein_coding	-	CCDS49468.1	1	610	0	1.99	0.5	35.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000021838	Samd4	ENSMUST00000227848	ENSMUSP00000154727	TRANSLATION	nonsense_mediated_decay	start	-	-	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021838	Samd4	ENSMUST00000130046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021838	Samd4	ENSMUST00000125688	ENSMUSP00000115569	TRANSLATION	protein_coding	-	CCDS79301.1	1	302	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000021838	Samd4	ENSMUST00000022386	ENSMUSP00000022386	TRANSLATION	protein_coding	-	CCDS26982.1	1	711	0	1.99	0.5	35.2	0	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000096149	Trav6-5	ENSMUST00000183488	ENSMUSP00000139176	TRANSLATION	TR_V_gene	stop	-	-	111	0	1.4	0	52.5	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096149	Trav6-5	ENSMUST00000181210	ENSMUSP00000137814	TRANSLATION	TR_V_gene	stop	-	-	112	0	1.4	0	52.5	0	1,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000091185	Gm3278	ENSMUST00000164459	ENSMUSP00000131885	TRANSLATION	protein_coding	-	-	5	218	0	0	0.5	68.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015968	Cacna1d	ENSMUST00000224912	ENSMUSP00000153689	TRANSLATION	nonsense_mediated_decay	start	-	-	180	0	4.75	0	104.6	8	-3,-5	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000112249	ENSMUSP00000107868	TRANSLATION	protein_coding	-	-	1	2187	0	36.02	0	1329.1	25	-4,-7	-	-	11.664	ALTERNATIVE:2
ENSMUSG00000015968	Cacna1d	ENSMUST00000223985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015968	Cacna1d	ENSMUST00000238675	ENSMUSP00000158846	TRANSLATION	protein_coding	-	-	-	1647	0	35.2	1	1103.8	25	-4,-7	-	-	4.278	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000238568	ENSMUSP00000158773	TRANSLATION	protein_coding	start	-	-	1643	0	35.2	0	1098.6	25	-4,-5	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000225353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015968	Cacna1d	ENSMUST00000238690	ENSMUSP00000158696	TRANSLATION	protein_coding	start/stop	-	-	284	0	7.5	0	162.5	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000223573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015968	Cacna1d	ENSMUST00000238571	ENSMUSP00000158698	TRANSLATION	protein_coding	start/stop	-	-	223	0	5.5	0	127.7	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000238336	ENSMUSP00000158801	TRANSLATION	protein_coding	start/stop	-	-	72	0	1.01	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000224073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015968	Cacna1d	ENSMUST00000225717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015968	Cacna1d	ENSMUST00000223803	ENSMUSP00000153586	TRANSLATION	protein_coding	-	-	-	2135	0	35.86	1.5	1327.9	23	-4,-7	-	-	11.268	ALTERNATIVE:2
ENSMUSG00000015968	Cacna1d	ENSMUST00000238524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015968	Cacna1d	ENSMUST00000238735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015968	Cacna1d	ENSMUST00000224395	ENSMUSP00000152953	TRANSLATION	nonsense_mediated_decay	-	-	-	513	0	8.65	0	234.3	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000015968	Cacna1d	ENSMUST00000238504	ENSMUSP00000158632	TRANSLATION	protein_coding	-	-	-	2179	0	36.06	1.5	1333.4	25	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000015968	Cacna1d	ENSMUST00000224785	ENSMUSP00000153293	TRANSLATION	protein_coding	-	-	-	2159	0	35.96	1.5	1331.4	23	-4,-7	-	-	11.682	ALTERNATIVE:2
ENSMUSG00000015968	Cacna1d	ENSMUST00000112250	ENSMUSP00000107869	TRANSLATION	protein_coding	-	CCDS36846.1	1	2166	0	35.76	0.5	1330.5	25	-4,-7	-	-	11.226	PRINCIPAL:3
ENSMUSG00000015968	Cacna1d	ENSMUST00000224198	ENSMUSP00000153250	TRANSLATION	protein_coding	-	CCDS36847.1	-	2144	0	35.86	1.5	1330.5	25	-4,-7	-	-	11.424	ALTERNATIVE:2
ENSMUSG00000079267	Gm5930	ENSMUST00000178002	ENSMUSP00000136583	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	87.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000079267	Gm5930	ENSMUST00000111863	ENSMUSP00000107494	TRANSLATION	protein_coding	-	-	5	264	0	0	0	87.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000014496	Ankrd28	ENSMUST00000228037	ENSMUSP00000154667	TRANSLATION	protein_coding	stop	-	-	185	0	4.316	0	133.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014496	Ankrd28	ENSMUST00000014640	ENSMUSP00000014640	TRANSLATION	protein_coding	-	CCDS36858.1	1	1053	0	19.329	13	652.5	0	-4,-5	-	-	15.428	PRINCIPAL:1
ENSMUSG00000014496	Ankrd28	ENSMUST00000227937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014496	Ankrd28	ENSMUST00000227307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014496	Ankrd28	ENSMUST00000227089	ENSMUSP00000154197	TRANSLATION	protein_coding	-	-	-	899	0	16.013	4.8	476.1	0	-4,-7	-	-	1.084	MINOR
ENSMUSG00000014496	Ankrd28	ENSMUST00000227613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014496	Ankrd28	ENSMUST00000227878	ENSMUSP00000154187	TRANSLATION	nonsense_mediated_decay	start	-	-	38	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014496	Ankrd28	ENSMUST00000226963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014496	Ankrd28	ENSMUST00000227083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014496	Ankrd28	ENSMUST00000227863	ENSMUSP00000153992	TRANSLATION	protein_coding	-	-	-	1083	0	19.263	15	610.1	0	-4,-5	-	-	13.324	MINOR
ENSMUSG00000076839	Trav13-1	ENSMUST00000103651	ENSMUSP00000100428	TRANSLATION	TR_V_gene	stop	-	-	110	0	1	0	53.7	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021922	Itih4	ENSMUST00000227899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021922	Itih4	ENSMUST00000168782	ENSMUSP00000125920	TRANSLATION	protein_coding	-	CCDS70558.1	1	925	4	1.3	0.5	242.6	0	3,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000021922	Itih4	ENSMUST00000078490	ENSMUSP00000077580	TRANSLATION	protein_coding	-	CCDS49433.1	1	941	4	1.3	0.5	242.6	0	3,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000021922	Itih4	ENSMUST00000120269	ENSMUSP00000112798	TRANSLATION	protein_coding	-	CCDS26901.1	1	942	4	1.3	0.5	242.6	0	3,-1	-	-	16	PRINCIPAL:3
ENSMUSG00000021922	Itih4	ENSMUST00000006703	ENSMUSP00000006703	TRANSLATION	protein_coding	-	CCDS79286.1	1	902	4	1.3	0.5	242.6	0	3,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000022009	Nufip1	ENSMUST00000022586	ENSMUSP00000022586	TRANSLATION	protein_coding	-	CCDS27284.1	1	484	7	1	0.5	96.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062148	Ear6	ENSMUST00000074477	ENSMUSP00000074075	TRANSLATION	protein_coding	-	CCDS27045.1	1	155	5	1	0.5	121.1	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000062148	Ear6	ENSMUST00000169070	ENSMUSP00000127152	TRANSLATION	protein_coding	-	CCDS27045.1	-	155	5	1	0.5	121.1	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000021951	Eef1akmt1	ENSMUST00000239099	ENSMUSP00000159159	TRANSLATION	protein_coding	-	-	-	214	3	0	5.1	187.6	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000021951	Eef1akmt1	ENSMUST00000022518	ENSMUSP00000022518	TRANSLATION	protein_coding	-	CCDS27157.1	1	224	3	0	1.5	187.6	0	-4,-5	-	-	9.244	MINOR
ENSMUSG00000021951	Eef1akmt1	ENSMUST00000225504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022129	Dct	ENSMUST00000022725	ENSMUSP00000022725	TRANSLATION	protein_coding	-	CCDS27331.1	1	517	7	2.48	2.9	115	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022129	Dct	ENSMUST00000228925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022129	Dct	ENSMUST00000228548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022129	Dct	ENSMUST00000227850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095912	Gm3317	ENSMUST00000179659	ENSMUSP00000137175	TRANSLATION	protein_coding	start	-	1	172	0	0	0.5	68.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000021944	Gata4	ENSMUST00000121312	ENSMUSP00000113451	TRANSLATION	protein_coding	-	-	1	236	8	3	0	107.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000021944	Gata4	ENSMUST00000067417	ENSMUSP00000066927	TRANSLATION	protein_coding	-	CCDS79331.1	1	442	8	3	1.5	280	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021944	Gata4	ENSMUST00000137244	ENSMUSP00000114279	TRANSLATION	protein_coding	stop	-	1	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021944	Gata4	ENSMUST00000132122	ENSMUSP00000121008	TRANSLATION	protein_coding	stop	-	1	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021944	Gata4	ENSMUST00000156782	ENSMUSP00000114369	TRANSLATION	protein_coding	stop	-	1	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021944	Gata4	ENSMUST00000118022	ENSMUSP00000113891	TRANSLATION	protein_coding	-	CCDS49519.1	1	441	8	3	1.5	280	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000021824	Ap3m1	ENSMUST00000130370	ENSMUSP00000115157	TRANSLATION	protein_coding	stop	-	2	148	0	1.4	0	30.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021824	Ap3m1	ENSMUST00000224016	ENSMUSP00000153649	TRANSLATION	protein_coding	-	-	-	204	0	4.33	0	183.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000021824	Ap3m1	ENSMUST00000022371	ENSMUSP00000022371	TRANSLATION	protein_coding	-	-	5	364	0	6.78	1.2	253.6	0	-4,-6	-	-	8.588	MINOR
ENSMUSG00000021824	Ap3m1	ENSMUST00000126536	ENSMUSP00000116046	TRANSLATION	nonsense_mediated_decay	-	-	3	114	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021824	Ap3m1	ENSMUST00000130291	ENSMUSP00000118259	TRANSLATION	protein_coding	stop	-	2	174	0	2	0	30.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021824	Ap3m1	ENSMUST00000154460	ENSMUSP00000117346	TRANSLATION	protein_coding	-	CCDS26861.1	1	418	0	7.58	19.5	284.5	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000021824	Ap3m1	ENSMUST00000148886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021824	Ap3m1	ENSMUST00000156716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015970	Chdh	ENSMUST00000125796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015970	Chdh	ENSMUST00000067620	ENSMUSP00000065542	TRANSLATION	protein_coding	-	CCDS26892.1	1	596	35	5.08	1.5	139.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000015970	Chdh	ENSMUST00000118917	ENSMUSP00000112916	TRANSLATION	protein_coding	-	CCDS26892.1	1	596	35	5.08	1.5	139.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000022131	Gpr180	ENSMUST00000022728	ENSMUSP00000022728	TRANSLATION	protein_coding	-	CCDS27333.1	1	441	0	0	7.5	282.9	0	1,2	-	-	9	PRINCIPAL:1
ENSMUSG00000056234	Ncoa4	ENSMUST00000168114	ENSMUSP00000131253	TRANSLATION	protein_coding	stop	-	3	106	0	0	0	45.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000227112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056234	Ncoa4	ENSMUST00000226479	ENSMUSP00000154536	TRANSLATION	nonsense_mediated_decay	-	-	-	102	0	0	0	58.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000228779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056234	Ncoa4	ENSMUST00000111994	ENSMUSP00000107625	TRANSLATION	protein_coding	-	CCDS36863.1	1	625	0	0	0.5	253.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056234	Ncoa4	ENSMUST00000163336	ENSMUSP00000126071	TRANSLATION	protein_coding	-	CCDS36863.1	1	625	0	0	0.5	253.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056234	Ncoa4	ENSMUST00000164341	ENSMUSP00000126780	TRANSLATION	protein_coding	stop	-	5	99	0	0	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000227498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056234	Ncoa4	ENSMUST00000168385	ENSMUSP00000126222	TRANSLATION	protein_coding	stop	-	3	205	0	0	0	158.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000168334	ENSMUSP00000128739	TRANSLATION	nonsense_mediated_decay	-	-	1	96	0	0	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000228143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056234	Ncoa4	ENSMUST00000168034	ENSMUSP00000129422	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	63.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056234	Ncoa4	ENSMUST00000169722	ENSMUSP00000129917	TRANSLATION	protein_coding	stop	-	5	338	0	0	0	253.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095493	A630023A22Rik	ENSMUST00000178958	ENSMUSP00000137109	TRANSLATION	protein_coding	-	CCDS56947.1	1	199	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095493	A630023A22Rik	ENSMUST00000215823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061244	Exoc5	ENSMUST00000160386	ENSMUSP00000123825	TRANSLATION	nonsense_mediated_decay	start	-	3	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061244	Exoc5	ENSMUST00000161504	ENSMUSP00000124012	TRANSLATION	protein_coding	-	-	5	643	0	10.4	1.2	445.5	0	-4,-5	-	-	8.658	MINOR
ENSMUSG00000061244	Exoc5	ENSMUST00000160453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061244	Exoc5	ENSMUST00000160723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061244	Exoc5	ENSMUST00000159651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061244	Exoc5	ENSMUST00000160833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061244	Exoc5	ENSMUST00000162175	ENSMUSP00000125434	TRANSLATION	protein_coding	-	CCDS49474.1	1	708	0	10.4	14.2	502.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000105629	Trav7n-5	ENSMUST00000199753	ENSMUSP00000143681	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	1	60.4	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000002326	Gmpr2	ENSMUST00000227914	ENSMUSP00000154349	TRANSLATION	protein_coding	stop	-	-	218	19	5.25	0	151	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002326	Gmpr2	ENSMUST00000226735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002326	Gmpr2	ENSMUST00000227178	ENSMUSP00000154721	TRANSLATION	protein_coding	stop	-	-	96	6	2.5	0	36.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002326	Gmpr2	ENSMUST00000226787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002326	Gmpr2	ENSMUST00000227696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002326	Gmpr2	ENSMUST00000002397	ENSMUSP00000002397	TRANSLATION	protein_coding	-	CCDS27124.1	1	348	36	7.75	19.5	276.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000094132	Gm3264	ENSMUST00000166410	ENSMUSP00000128744	TRANSLATION	protein_coding	-	CCDS56919.1	1	172	0	0	0.5	68.8	0	-4,-5	-	-	5.526	PRINCIPAL:2
ENSMUSG00000094132	Gm3264	ENSMUST00000166776	ENSMUSP00000131011	TRANSLATION	protein_coding	-	-	5	238	0	0	0	74.7	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000094578	Gm3187	ENSMUST00000181603	ENSMUSP00000138041	TRANSLATION	protein_coding	start	-	5	260	0	0	0	76.5	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000094578	Gm3187	ENSMUST00000178429	ENSMUSP00000136784	TRANSLATION	protein_coding	start	-	5	205	0	0	0.5	76.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022075	Rhobtb2	ENSMUST00000022665	ENSMUSP00000022665	TRANSLATION	protein_coding	-	CCDS27244.1	1	728	18	2.12	1.5	150.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022075	Rhobtb2	ENSMUST00000223603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022075	Rhobtb2	ENSMUST00000225088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022075	Rhobtb2	ENSMUST00000224535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037697	Ddhd1	ENSMUST00000111828	ENSMUSP00000107459	TRANSLATION	protein_coding	-	CCDS36894.1	1	884	0	0	1.5	178.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037697	Ddhd1	ENSMUST00000141487	ENSMUSP00000133358	TRANSLATION	nonsense_mediated_decay	start	-	1	156	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037697	Ddhd1	ENSMUST00000152110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037697	Ddhd1	ENSMUST00000226559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037697	Ddhd1	ENSMUST00000156758	ENSMUSP00000121837	TRANSLATION	nonsense_mediated_decay	start	-	5	182	0	0	0	60.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037697	Ddhd1	ENSMUST00000153547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037697	Ddhd1	ENSMUST00000129599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037697	Ddhd1	ENSMUST00000226301	ENSMUSP00000154065	TRANSLATION	protein_coding	start/stop	-	-	227	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037697	Ddhd1	ENSMUST00000126428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037697	Ddhd1	ENSMUST00000087320	ENSMUSP00000084577	TRANSLATION	protein_coding	-	CCDS36895.1	1	918	0	0	1.5	178.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000037697	Ddhd1	ENSMUST00000149286	ENSMUSP00000118848	TRANSLATION	nonsense_mediated_decay	-	-	1	352	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037697	Ddhd1	ENSMUST00000147551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037697	Ddhd1	ENSMUST00000051310	ENSMUSP00000050088	TRANSLATION	protein_coding	-	CCDS26978.1	1	856	0	0	1.5	178.2	0	-4,-6	-	-	5.964	PRINCIPAL:3
ENSMUSG00000055421	Pcdh9	ENSMUST00000195376	ENSMUSP00000142224	TRANSLATION	protein_coding	-	CCDS84156.1	5	1195	58	0.96	7.5	633.9	1	0,-3	-	-	20.08	MINOR
ENSMUSG00000055421	Pcdh9	ENSMUST00000193901	ENSMUSP00000141759	TRANSLATION	protein_coding	-	CCDS79350.1	1	1203	58	0.96	13.5	633.9	1	0,-3	-	-	22	PRINCIPAL:1
ENSMUSG00000055421	Pcdh9	ENSMUST00000194129	ENSMUSP00000141205	TRANSLATION	protein_coding	start	-	5	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055421	Pcdh9	ENSMUST00000192221	ENSMUSP00000142260	TRANSLATION	protein_coding	-	CCDS79352.1	1	1038	56	0.6	0.5	599.2	1	-4,-5	-	-	12.336	MINOR
ENSMUSG00000055421	Pcdh9	ENSMUST00000068992	ENSMUSP00000070935	TRANSLATION	protein_coding	-	CCDS36992.1	1	1237	58	0.96	7.5	633.2	1	0,-3	-	-	20.038	MINOR
ENSMUSG00000055421	Pcdh9	ENSMUST00000194056	ENSMUSP00000141602	TRANSLATION	protein_coding	stop	-	2	873	58	0.96	0	460.6	1	0,-3	-	-	-1	MINOR
ENSMUSG00000055421	Pcdh9	ENSMUST00000192817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055421	Pcdh9	ENSMUST00000195826	ENSMUSP00000141396	TRANSLATION	protein_coding	-	CCDS36992.1	5	1237	58	0.96	7.5	633.2	1	0,-3	-	-	20.038	MINOR
ENSMUSG00000090547	Gm8265	ENSMUST00000170469	ENSMUSP00000128985	TRANSLATION	protein_coding	stop	-	5	158	0	0	0	83.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091617	Gm3752	ENSMUST00000167833	ENSMUSP00000126299	TRANSLATION	protein_coding	stop	-	5	150	0	0	0.5	68.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091617	Gm3752	ENSMUST00000164366	ENSMUSP00000132286	TRANSLATION	protein_coding	-	-	5	150	0	0	0.5	68.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057179	Olfr747	ENSMUST00000205897	ENSMUSP00000145956	TRANSLATION	protein_coding	stop	-	5	17	0	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057179	Olfr747	ENSMUST00000205373	ENSMUSP00000145625	TRANSLATION	protein_coding	-	CCDS27022.1	5	313	0	0.46	3.9	178	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000057179	Olfr747	ENSMUST00000213238	ENSMUSP00000149081	TRANSLATION	protein_coding	-	CCDS27022.1	3	313	0	0.46	3.9	178	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000057179	Olfr747	ENSMUST00000078075	ENSMUSP00000077220	TRANSLATION	protein_coding	-	CCDS27022.1	-	313	0	0.46	3.9	178	6	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000040752	Myh6	ENSMUST00000226297	ENSMUSP00000154634	TRANSLATION	protein_coding	-	CCDS36927.1	-	1938	16	35.83	8.3	1570	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040752	Myh6	ENSMUST00000111456	ENSMUSP00000107083	TRANSLATION	protein_coding	stop	-	3	63	0	1	0	41.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040752	Myh6	ENSMUST00000131892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040752	Myh6	ENSMUST00000228731	ENSMUSP00000153961	TRANSLATION	protein_coding	start	-	-	162	0	3	0	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040752	Myh6	ENSMUST00000227905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040752	Myh6	ENSMUST00000081857	ENSMUSP00000080538	TRANSLATION	protein_coding	-	CCDS36927.1	1	1938	16	35.83	8.3	1570	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040752	Myh6	ENSMUST00000124930	ENSMUSP00000115615	TRANSLATION	protein_coding	stop	-	1	94	0	1.75	0	58	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096470	Gm9603	ENSMUST00000165814	ENSMUSP00000126547	TRANSLATION	protein_coding	-	-	5	270	0	0	0	80.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072494	Ppp1r3e	ENSMUST00000168622	ENSMUSP00000134915	TRANSLATION	protein_coding	-	CCDS56958.1	5	279	0	0.6	7.5	77.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000072494	Ppp1r3e	ENSMUST00000194094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072494	Ppp1r3e	ENSMUST00000182700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072494	Ppp1r3e	ENSMUST00000177403	ENSMUSP00000134894	TRANSLATION	protein_coding	-	CCDS56958.1	5	279	0	0.6	7.5	77.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000035235	Trim13	ENSMUST00000165015	ENSMUSP00000128509	TRANSLATION	protein_coding	-	CCDS27186.1	1	407	16	0	5.1	74.4	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000035235	Trim13	ENSMUST00000039562	ENSMUSP00000045009	TRANSLATION	protein_coding	-	CCDS27186.1	1	407	16	0	5.1	74.4	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000071350	Setdb2	ENSMUST00000111253	ENSMUSP00000106884	TRANSLATION	protein_coding	-	-	2	140	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000071350	Setdb2	ENSMUST00000160904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071350	Setdb2	ENSMUST00000159640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071350	Setdb2	ENSMUST00000161459	ENSMUSP00000124696	TRANSLATION	protein_coding	-	CCDS84142.1	1	697	27	3.6	0.5	160.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000071350	Setdb2	ENSMUST00000095775	ENSMUSP00000093450	TRANSLATION	protein_coding	-	-	5	713	27	3.6	0	160.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000021737	Psmd6	ENSMUST00000022256	ENSMUSP00000022256	TRANSLATION	protein_coding	-	CCDS26824.1	1	389	0	8.83	14.1	268.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021737	Psmd6	ENSMUST00000127228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021737	Psmd6	ENSMUST00000153237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021737	Psmd6	ENSMUST00000147471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021737	Psmd6	ENSMUST00000224955	ENSMUSP00000153591	TRANSLATION	protein_coding	start/stop	-	-	192	0	4	0	112.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021737	Psmd6	ENSMUST00000224076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095765	Olfr741	ENSMUST00000213903	ENSMUSP00000151020	TRANSLATION	protein_coding	-	CCDS27017.1	5	311	0	0.42	3.9	187.4	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000095765	Olfr741	ENSMUST00000205518	ENSMUSP00000145848	TRANSLATION	protein_coding	-	CCDS27017.1	2	311	0	0.42	3.9	187.4	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000095765	Olfr741	ENSMUST00000071932	ENSMUSP00000071824	TRANSLATION	protein_coding	-	CCDS27017.1	-	311	0	0.42	3.9	187.4	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000021775	Nr1d2	ENSMUST00000090543	ENSMUSP00000088031	TRANSLATION	protein_coding	-	CCDS36811.1	1	576	8	5.25	2.7	193.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000021775	Nr1d2	ENSMUST00000225308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021775	Nr1d2	ENSMUST00000225491	ENSMUSP00000153325	TRANSLATION	protein_coding	stop	-	-	175	0	3	0	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021775	Nr1d2	ENSMUST00000143308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022037	Clu	ENSMUST00000153460	ENSMUSP00000121633	TRANSLATION	protein_coding	stop	-	2	265	0	0	0	281.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022037	Clu	ENSMUST00000138665	ENSMUSP00000121056	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022037	Clu	ENSMUST00000128539	ENSMUSP00000121485	TRANSLATION	protein_coding	stop	-	2	203	0	0	0	249.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022037	Clu	ENSMUST00000138191	ENSMUSP00000117555	TRANSLATION	protein_coding	stop	-	5	225	0	0	0	256.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022037	Clu	ENSMUST00000152903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022037	Clu	ENSMUST00000146990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022037	Clu	ENSMUST00000127387	ENSMUSP00000114720	TRANSLATION	protein_coding	stop	-	3	233	0	0	0	257.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022037	Clu	ENSMUST00000022616	ENSMUSP00000022616	TRANSLATION	protein_coding	-	CCDS36957.1	1	448	0	0	1.5	511.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022037	Clu	ENSMUST00000144619	ENSMUSP00000117953	TRANSLATION	protein_coding	stop	-	3	209	0	0	0	131.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000076866	Trdv2-2	ENSMUST00000103678	ENSMUSP00000100455	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.2	0	62.6	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000021877	Arf4	ENSMUST00000171207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021877	Arf4	ENSMUST00000022429	ENSMUSP00000022429	TRANSLATION	protein_coding	-	CCDS26881.1	1	180	23	5.41	19.5	250.3	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000021877	Arf4	ENSMUST00000171282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021877	Arf4	ENSMUST00000166075	ENSMUSP00000132159	TRANSLATION	nonsense_mediated_decay	-	-	5	64	11	2.028	0	56	0	-4,0	-	-	-1	MINOR
ENSMUSG00000021877	Arf4	ENSMUST00000167376	ENSMUSP00000127272	TRANSLATION	nonsense_mediated_decay	start	-	5	60	4	1.5	0	51.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021877	Arf4	ENSMUST00000224138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021877	Arf4	ENSMUST00000112318	ENSMUSP00000107937	TRANSLATION	protein_coding	-	-	5	153	17	4.66	1.2	180.4	0	-4,-1	-	-	8.348	MINOR
ENSMUSG00000072605	Gm10376	ENSMUST00000100694	ENSMUSP00000098259	TRANSLATION	protein_coding	-	-	5	184	0	0	0.5	63.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000072605	Gm10376	ENSMUST00000169756	ENSMUSP00000128599	TRANSLATION	protein_coding	-	-	1	184	0	0	0.5	63.9	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000025290	Rps24	ENSMUST00000224549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025290	Rps24	ENSMUST00000225117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025290	Rps24	ENSMUST00000225023	ENSMUSP00000152944	TRANSLATION	protein_coding	-	CCDS36829.1	-	133	0	2.66	15	154.6	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000025290	Rps24	ENSMUST00000225994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025290	Rps24	ENSMUST00000224568	ENSMUSP00000153637	TRANSLATION	protein_coding	-	-	-	118	0	2.33	4.9	154.6	0	-4,-7	-	-	12.372	MINOR
ENSMUSG00000025290	Rps24	ENSMUST00000224569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025290	Rps24	ENSMUST00000224699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025290	Rps24	ENSMUST00000223931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025290	Rps24	ENSMUST00000223999	ENSMUSP00000153659	TRANSLATION	protein_coding	-	-	-	131	0	2.66	15	154.6	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000025290	Rps24	ENSMUST00000112384	ENSMUSP00000108003	TRANSLATION	protein_coding	-	CCDS36830.1	5	130	0	2.66	15	154.6	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000025290	Rps24	ENSMUST00000169826	ENSMUSP00000125977	TRANSLATION	protein_coding	-	CCDS36830.1	1	130	0	2.66	15	154.6	0	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000025290	Rps24	ENSMUST00000223939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076892	Traj38	ENSMUST00000103704	ENSMUSP00000143224	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000047911	Npm2	ENSMUST00000228473	ENSMUSP00000154427	TRANSLATION	non_stop_decay	stop	-	-	168	0	3.05	0	118	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047911	Npm2	ENSMUST00000062629	ENSMUSP00000057365	TRANSLATION	protein_coding	-	CCDS27261.1	1	207	0	3.05	1.5	118	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000021743	Fezf2	ENSMUST00000224714	ENSMUSP00000153090	TRANSLATION	protein_coding	-	CCDS26818.1	-	455	24	2.8	1.5	112.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000021743	Fezf2	ENSMUST00000224023	ENSMUSP00000153647	TRANSLATION	protein_coding	-	-	-	373	14	2	0	73.7	0	-4,-7	-	-	7.98	MINOR
ENSMUSG00000021743	Fezf2	ENSMUST00000022262	ENSMUSP00000022262	TRANSLATION	protein_coding	-	CCDS26818.1	1	455	24	2.8	1.5	112.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000093979	Gm2237	ENSMUST00000112595	ENSMUSP00000108214	TRANSLATION	protein_coding	-	-	1	156	0	0	0	69.4	0	-4,-5	-	-	5.52	PRINCIPAL:3
ENSMUSG00000093979	Gm2237	ENSMUST00000170694	ENSMUSP00000133164	TRANSLATION	protein_coding	-	-	5	211	0	0	0	75.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000021906	Oxnad1	ENSMUST00000164396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021906	Oxnad1	ENSMUST00000022462	ENSMUSP00000022462	TRANSLATION	protein_coding	-	CCDS26918.1	1	311	29	4.164	1.5	53.4	0	-2,1	-	-	18	PRINCIPAL:1
ENSMUSG00000021906	Oxnad1	ENSMUST00000170519	ENSMUSP00000132560	TRANSLATION	nonsense_mediated_decay	start	-	3	86	13	1.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000164868	ENSMUSP00000125791	TRANSLATION	nonsense_mediated_decay	-	-	1	157	13	1.21	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000168986	ENSMUSP00000126372	TRANSLATION	protein_coding	stop	-	1	141	13	0.91	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000171849	ENSMUSP00000127884	TRANSLATION	protein_coding	start	-	5	105	12	0.91	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000169649	ENSMUSP00000126731	TRANSLATION	protein_coding	stop	-	3	71	4	0.4	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000165523	ENSMUSP00000129545	TRANSLATION	nonsense_mediated_decay	-	-	2	61	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000171598	ENSMUSP00000132162	TRANSLATION	protein_coding	stop	-	3	115	5	0.7	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000169078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021906	Oxnad1	ENSMUST00000227845	ENSMUSP00000153925	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000166810	ENSMUSP00000130215	TRANSLATION	protein_coding	stop	-	3	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021906	Oxnad1	ENSMUST00000170600	ENSMUSP00000130998	TRANSLATION	protein_coding	stop	-	3	160	14	1.21	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000007989	Fzd3	ENSMUST00000127272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007989	Fzd3	ENSMUST00000131309	ENSMUSP00000115325	TRANSLATION	protein_coding	-	CCDS27212.1	1	666	0	2.32	8.8	505	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000096417	Trav7-2	ENSMUST00000103636	ENSMUSP00000100413	TRANSLATION	TR_V_gene	stop	-	-	112	0	1	0	65	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000044819	Oxgr1	ENSMUST00000058213	ENSMUSP00000055137	TRANSLATION	protein_coding	-	CCDS27340.1	1	337	0	0.48	6.3	117.8	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000095686	Gm3099	ENSMUST00000178274	ENSMUSP00000137169	TRANSLATION	protein_coding	-	-	5	205	0	0	0.5	82.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000095686	Gm3099	ENSMUST00000112787	ENSMUSP00000108407	TRANSLATION	protein_coding	-	-	1	205	0	0	0.5	82.6	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000094231	Trav9n-4	ENSMUST00000103626	ENSMUSP00000100403	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	0	57.6	0	3,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000023156	Rpp14	ENSMUST00000180369	ENSMUSP00000136494	TRANSLATION	protein_coding	-	-	-	158	4	1	0	65.8	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000023156	Rpp14	ENSMUST00000023924	ENSMUSP00000023924	TRANSLATION	protein_coding	-	CCDS26809.1	1	122	0	0	6.3	35.4	0	-4,-5	-	-	5.228	MINOR
ENSMUSG00000075478	Slitrk1	ENSMUST00000100322	ENSMUSP00000097897	TRANSLATION	protein_coding	-	CCDS27325.1	-	696	0	0.8	9.5	90.9	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000094692	Olfr738	ENSMUST00000058972	ENSMUSP00000059540	TRANSLATION	protein_coding	-	CCDS27014.1	-	311	0	0.42	4	169.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094692	Olfr738	ENSMUST00000214853	ENSMUSP00000150351	TRANSLATION	protein_coding	-	CCDS27014.1	5	311	0	0.42	4	169.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000094692	Olfr738	ENSMUST00000214320	ENSMUSP00000150067	TRANSLATION	protein_coding	-	CCDS27014.1	5	311	0	0.42	4	169.9	6	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049092	Gpr137c	ENSMUST00000226915	ENSMUSP00000154462	TRANSLATION	protein_coding	start	-	-	112	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049092	Gpr137c	ENSMUST00000151749	ENSMUSP00000154701	TRANSLATION	nonsense_mediated_decay	start	-	3	52	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000049092	Gpr137c	ENSMUST00000227056	ENSMUSP00000153906	TRANSLATION	protein_coding	start	-	-	147	0	0	0	0	9	-3,-6	-	-	-1	MINOR
ENSMUSG00000049092	Gpr137c	ENSMUST00000147957	ENSMUSP00000153745	TRANSLATION	protein_coding	-	-	1	173	0	0	0.5	0	9	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000049092	Gpr137c	ENSMUST00000146150	ENSMUSP00000120015	TRANSLATION	protein_coding	-	CCDS49464.1	5	423	0	0	1.5	0	12	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000049092	Gpr137c	ENSMUST00000227086	ENSMUSP00000154316	TRANSLATION	protein_coding	-	-	-	204	0	0	0	0	9	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000049092	Gpr137c	ENSMUST00000227009	ENSMUSP00000153737	TRANSLATION	protein_coding	-	-	-	154	0	0	0.5	0	9	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000071361	Mcpt9	ENSMUST00000095798	ENSMUSP00000093476	TRANSLATION	protein_coding	-	CCDS27138.1	1	246	7	4.2	0.5	192	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000091700	Gm7876	ENSMUST00000169465	ENSMUSP00000127177	TRANSLATION	protein_coding	-	-	5	204	0	0	0.5	72.6	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000091700	Gm7876	ENSMUST00000171305	ENSMUSP00000129841	TRANSLATION	protein_coding	-	-	5	263	0	0	0	72.6	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000072145	BC061237	ENSMUST00000096899	ENSMUSP00000094662	TRANSLATION	protein_coding	-	CCDS49462.1	1	184	0	0	0.5	80.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000072145	BC061237	ENSMUST00000227102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039357	Fut11	ENSMUST00000225804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039357	Fut11	ENSMUST00000048016	ENSMUSP00000040370	TRANSLATION	protein_coding	-	CCDS26851.1	1	489	9	0.2	0.5	158.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033186	Mzt1	ENSMUST00000227197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033186	Mzt1	ENSMUST00000042662	ENSMUSP00000037557	TRANSLATION	protein_coding	-	CCDS49554.1	1	78	0	0	1.5	88.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033186	Mzt1	ENSMUST00000228445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033186	Mzt1	ENSMUST00000227948	ENSMUSP00000154225	TRANSLATION	protein_coding	-	-	-	41	0	0	0	51.4	0	-4,-5	-	-	3.486	MINOR
ENSMUSG00000021981	Cab39l	ENSMUST00000224281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021981	Cab39l	ENSMUST00000223678	ENSMUSP00000153281	TRANSLATION	protein_coding	stop	-	-	79	0	2	0	60.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021981	Cab39l	ENSMUST00000225595	ENSMUSP00000153643	TRANSLATION	protein_coding	-	-	-	296	0	7.12	0	373.4	0	-4,-5	-	-	4.914	MINOR
ENSMUSG00000021981	Cab39l	ENSMUST00000022553	ENSMUSP00000022553	TRANSLATION	protein_coding	-	CCDS27171.1	1	337	0	8	19.5	462.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021981	Cab39l	ENSMUST00000224893	ENSMUSP00000153449	TRANSLATION	protein_coding	stop	-	-	32	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021981	Cab39l	ENSMUST00000225149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022055	Nefl	ENSMUST00000022639	ENSMUSP00000022639	TRANSLATION	protein_coding	-	CCDS27232.1	1	543	0	1.4	0.5	389.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022114	Spry2	ENSMUST00000022709	ENSMUSP00000022709	TRANSLATION	protein_coding	-	CCDS27321.1	1	315	0	0	9.5	121.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000072625	Gdf2	ENSMUST00000100720	ENSMUSP00000098286	TRANSLATION	protein_coding	-	CCDS26928.1	1	428	0	2	1.5	163	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000021973	Micu2	ENSMUST00000225961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021973	Micu2	ENSMUST00000022543	ENSMUSP00000022543	TRANSLATION	protein_coding	-	CCDS27163.1	1	432	8	4.9264	1.5	23.2	0	-1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000021973	Micu2	ENSMUST00000224984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021973	Micu2	ENSMUST00000224607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021973	Micu2	ENSMUST00000225116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034689	Spertl	ENSMUST00000045892	ENSMUSP00000044028	TRANSLATION	protein_coding	-	CCDS27307.1	1	274	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000034689	Spertl	ENSMUST00000228913	ENSMUSP00000153934	TRANSLATION	protein_coding	-	CCDS27307.1	-	274	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000034893	Cog3	ENSMUST00000226686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034893	Cog3	ENSMUST00000228081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034893	Cog3	ENSMUST00000049168	ENSMUSP00000045016	TRANSLATION	protein_coding	-	CCDS36979.1	1	828	0	0	3.9	177.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000006526	Stimate	ENSMUST00000228046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006526	Stimate	ENSMUST00000227246	ENSMUSP00000154178	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000006526	Stimate	ENSMUST00000226788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006526	Stimate	ENSMUST00000227776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006526	Stimate	ENSMUST00000228066	ENSMUSP00000154699	TRANSLATION	nonsense_mediated_decay	-	-	-	72	0	0	0	0	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000006526	Stimate	ENSMUST00000006701	ENSMUSP00000006701	TRANSLATION	protein_coding	-	CCDS26899.1	1	288	0	0	1.5	112.8	6	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000021795	Sftpd	ENSMUST00000225892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021795	Sftpd	ENSMUST00000077136	ENSMUSP00000076383	TRANSLATION	protein_coding	-	CCDS26962.1	1	374	13	6.23	1.5	236.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000007589	Tinf2	ENSMUST00000228683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007589	Tinf2	ENSMUST00000227996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007589	Tinf2	ENSMUST00000007733	ENSMUSP00000007733	TRANSLATION	protein_coding	-	CCDS27125.1	1	414	0	0	0.5	131.6	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000007589	Tinf2	ENSMUST00000226314	ENSMUSP00000154611	TRANSLATION	protein_coding	stop	-	-	197	0	0	0	91.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000007589	Tinf2	ENSMUST00000228264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007589	Tinf2	ENSMUST00000227873	ENSMUSP00000153900	TRANSLATION	protein_coding	stop	-	-	149	0	0	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007589	Tinf2	ENSMUST00000227842	ENSMUSP00000154628	TRANSLATION	protein_coding	-	-	-	419	0	0	0.5	131.6	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000007589	Tinf2	ENSMUST00000226819	ENSMUSP00000154730	TRANSLATION	protein_coding	start	-	-	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007589	Tinf2	ENSMUST00000226641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076897	Traj32	ENSMUST00000103709	ENSMUSP00000143024	TRANSLATION	TR_J_gene	start/stop	-	-	22	0	0.75	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096825	Trav12-1	ENSMUST00000103650	ENSMUSP00000100427	TRANSLATION	TR_V_gene	stop	-	-	114	0	1	0	48.5	0	4,-1	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096825	Trav12-1	ENSMUST00000200115	ENSMUSP00000143545	TRANSLATION	TR_V_gene	stop	-	-	115	0	1	0	48.5	0	4,-1	-	-	-1	PRINCIPAL:5
ENSMUSG00000094800	Gm9780	ENSMUST00000184915	ENSMUSP00000145436	TRANSLATION	protein_coding	-	-	1	108	0	0	0.5	135.1	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094800	Gm9780	ENSMUST00000184272	ENSMUSP00000144775	TRANSLATION	protein_coding	stop	-	2	108	0	0	0.5	134.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022091	Sorbs3	ENSMUST00000227259	ENSMUSP00000153715	TRANSLATION	protein_coding	-	-	-	680	0	5.36	1.5	204.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022091	Sorbs3	ENSMUST00000227929	ENSMUSP00000154773	TRANSLATION	protein_coding	-	-	-	715	0	4.86	0	186.8	0	-4,-6	-	-	9.948	MINOR
ENSMUSG00000022091	Sorbs3	ENSMUST00000227653	ENSMUSP00000154195	TRANSLATION	protein_coding	-	-	-	680	0	5.36	1.5	204.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022091	Sorbs3	ENSMUST00000022682	ENSMUSP00000022682	TRANSLATION	protein_coding	-	CCDS27249.1	1	733	0	5.36	1.5	204.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000058317	Ube2e2	ENSMUST00000177259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058317	Ube2e2	ENSMUST00000177398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058317	Ube2e2	ENSMUST00000076133	ENSMUSP00000075495	TRANSLATION	protein_coding	-	CCDS26838.1	3	201	0	5.8	14	159.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000058317	Ube2e2	ENSMUST00000176555	ENSMUSP00000134919	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	1.47	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058317	Ube2e2	ENSMUST00000176672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058317	Ube2e2	ENSMUST00000150727	ENSMUSP00000115738	TRANSLATION	protein_coding	-	CCDS26838.1	1	201	0	5.8	14	159.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000058317	Ube2e2	ENSMUST00000176931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058317	Ube2e2	ENSMUST00000151926	ENSMUSP00000118321	TRANSLATION	protein_coding	stop	-	3	181	0	4.22	0	122.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058317	Ube2e2	ENSMUST00000176062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058317	Ube2e2	ENSMUST00000144873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058317	Ube2e2	ENSMUST00000124353	ENSMUSP00000114162	TRANSLATION	protein_coding	stop	-	3	108	0	2.47	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058317	Ube2e2	ENSMUST00000175643	ENSMUSP00000135674	TRANSLATION	protein_coding	start	-	3	167	0	5.37	0	150.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058317	Ube2e2	ENSMUST00000135381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058317	Ube2e2	ENSMUST00000176843	ENSMUSP00000135622	TRANSLATION	protein_coding	start/stop	-	5	146	0	4.55	0	137	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095681	Gm8281	ENSMUST00000163719	ENSMUSP00000132035	TRANSLATION	protein_coding	-	-	5	197	0	0	0	74.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095681	Gm8281	ENSMUST00000100893	ENSMUSP00000098453	TRANSLATION	protein_coding	stop	-	5	204	0	0	0.5	74.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002332	Dhrs1	ENSMUST00000155969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002332	Dhrs1	ENSMUST00000002403	ENSMUSP00000002403	TRANSLATION	protein_coding	-	CCDS36934.1	1	313	28	6.25	5.1	136	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000002332	Dhrs1	ENSMUST00000142043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002332	Dhrs1	ENSMUST00000128802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091472	Gm3739	ENSMUST00000165744	ENSMUSP00000127597	TRANSLATION	protein_coding	-	-	5	216	0	0	0	73.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000090594	Gm3327	ENSMUST00000168906	ENSMUSP00000130980	TRANSLATION	protein_coding	start	-	5	213	0	0	0	88.5	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000075502	Kbtbd6	ENSMUST00000100359	ENSMUSP00000097929	TRANSLATION	protein_coding	-	-	-	549	0	0.32	0	148.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000075502	Kbtbd6	ENSMUST00000226192	ENSMUSP00000154099	TRANSLATION	protein_coding	-	CCDS27299.2	-	486	0	0.32	0.5	148.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000025280	Polr3a	ENSMUST00000225526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025280	Polr3a	ENSMUST00000223848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025280	Polr3a	ENSMUST00000026322	ENSMUSP00000026322	TRANSLATION	protein_coding	-	CCDS36828.1	1	1390	11	25.28	13.5	1127.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025280	Polr3a	ENSMUST00000225014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025280	Polr3a	ENSMUST00000223718	ENSMUSP00000153243	TRANSLATION	nonsense_mediated_decay	-	-	-	649	11	11.12	0	656.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094023	Trav7d-4	ENSMUST00000178768	ENSMUSP00000136110	TRANSLATION	TR_V_gene	stop	-	-	113	0	1	1	68.6	0	4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000021773	Comtd1	ENSMUST00000177527	ENSMUSP00000134830	TRANSLATION	protein_coding	-	-	5	200	15	5	0	0	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000021773	Comtd1	ENSMUST00000022295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021773	Comtd1	ENSMUST00000152905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021773	Comtd1	ENSMUST00000124549	ENSMUSP00000119330	TRANSLATION	protein_coding	-	CCDS26868.1	1	262	15	6	3.9	0	0	-2,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000055128	Cgrrf1	ENSMUST00000133989	ENSMUSP00000154697	TRANSLATION	protein_coding	-	-	1	212	0	0	0	0	2	-2,-5	-	-	0	MINOR
ENSMUSG00000055128	Cgrrf1	ENSMUST00000133790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055128	Cgrrf1	ENSMUST00000226861	ENSMUSP00000153818	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000055128	Cgrrf1	ENSMUST00000068532	ENSMUSP00000070548	TRANSLATION	protein_coding	-	CCDS26981.1	1	332	8	1	1.5	43.6	2	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055128	Cgrrf1	ENSMUST00000140114	ENSMUSP00000154423	TRANSLATION	protein_coding	-	-	1	112	0	0	0	0	2	-2,-5	-	-	0	MINOR
ENSMUSG00000050222	Il17d	ENSMUST00000089494	ENSMUSP00000086921	TRANSLATION	protein_coding	-	CCDS49507.1	1	205	0	0.6	1.7	94.1	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000076924	Traj4	ENSMUST00000103736	ENSMUSP00000142969	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0.75	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000094413	Trav15n-1	ENSMUST00000103590	ENSMUSP00000100367	TRANSLATION	TR_V_gene	stop	-	-	116	0	1.3	0	53	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000094413	Trav15n-1	ENSMUST00000197433	ENSMUSP00000143704	TRANSLATION	TR_V_gene	stop	-	-	117	0	1.3	0	53	0	1,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000033644	Piwil2	ENSMUST00000226426	ENSMUSP00000154541	TRANSLATION	protein_coding	stop	-	-	63	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033644	Piwil2	ENSMUST00000226229	ENSMUSP00000154615	TRANSLATION	protein_coding	stop	-	-	285	0	1.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033644	Piwil2	ENSMUST00000048129	ENSMUSP00000047385	TRANSLATION	protein_coding	-	CCDS27252.1	1	971	8	14.72	1.5	433.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022025	Cnmd	ENSMUST00000165204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022025	Cnmd	ENSMUST00000165835	ENSMUSP00000126958	TRANSLATION	protein_coding	-	CCDS79348.1	1	338	0	0	1.5	68.8	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000022025	Cnmd	ENSMUST00000167524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022025	Cnmd	ENSMUST00000172331	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022025	Cnmd	ENSMUST00000022603	ENSMUSP00000022603	TRANSLATION	protein_coding	-	CCDS27302.1	1	334	0	0	2.7	68.8	1	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000022021	Diaph3	ENSMUST00000168889	ENSMUSP00000129420	TRANSLATION	protein_coding	-	CCDS36990.1	1	1171	0	20.355	1.5	793.3	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000022021	Diaph3	ENSMUST00000226134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022021	Diaph3	ENSMUST00000227666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022021	Diaph3	ENSMUST00000226254	ENSMUSP00000154692	TRANSLATION	protein_coding	-	-	-	82	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022021	Diaph3	ENSMUST00000227638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022021	Diaph3	ENSMUST00000228000	ENSMUSP00000153711	TRANSLATION	non_stop_decay	stop	-	-	656	0	11.665	0	381.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022021	Diaph3	ENSMUST00000226492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022021	Diaph3	ENSMUST00000226745	ENSMUSP00000154037	TRANSLATION	protein_coding	-	-	-	82	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022021	Diaph3	ENSMUST00000022599	ENSMUSP00000022599	TRANSLATION	protein_coding	-	-	5	1171	0	20.355	1.5	790.7	0	-4,-7	-	-	11.844	ALTERNATIVE:2
ENSMUSG00000076891	Traj39	ENSMUST00000103703	ENSMUSP00000142544	TRANSLATION	TR_J_gene	start/stop	-	-	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035726	Supt16	ENSMUST00000046709	ENSMUSP00000042283	TRANSLATION	protein_coding	-	CCDS27051.1	1	1047	4	19.2	7.6	555.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000035726	Supt16	ENSMUST00000227577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040632	Nrl	ENSMUST00000228351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040632	Nrl	ENSMUST00000062232	ENSMUSP00000054457	TRANSLATION	protein_coding	-	CCDS27113.1	1	237	0	1	5.1	161.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040632	Nrl	ENSMUST00000228902	ENSMUSP00000154322	TRANSLATION	protein_coding	stop	-	-	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040632	Nrl	ENSMUST00000111404	ENSMUSP00000107035	TRANSLATION	protein_coding	-	CCDS27113.1	1	237	0	1	5.1	161.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040632	Nrl	ENSMUST00000226858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040632	Nrl	ENSMUST00000178694	ENSMUSP00000136445	TRANSLATION	protein_coding	-	CCDS27113.1	1	237	0	1	5.1	161.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040632	Nrl	ENSMUST00000228287	ENSMUSP00000153933	TRANSLATION	protein_coding	stop	-	-	226	0	1	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095126	Trav6-7-dv9	ENSMUST00000103638	ENSMUSP00000100415	TRANSLATION	TR_V_gene	stop	-	-	125	0	1.36	0	43.8	0	0,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000021790	Dydc1	ENSMUST00000189865	ENSMUSP00000139412	TRANSLATION	protein_coding	-	CCDS49451.1	1	175	0	0	0.5	68.8	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000021790	Dydc1	ENSMUST00000022315	ENSMUSP00000022315	TRANSLATION	nonsense_mediated_decay	-	-	1	175	0	0	0.5	68.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021790	Dydc1	ENSMUST00000161837	ENSMUSP00000124785	TRANSLATION	protein_coding	-	-	5	177	0	0	1.5	68.8	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000005148	Klf5	ENSMUST00000005279	ENSMUSP00000005279	TRANSLATION	protein_coding	-	CCDS27311.1	1	446	12	1.75	1.5	65.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000005148	Klf5	ENSMUST00000226784	ENSMUSP00000154786	TRANSLATION	protein_coding	-	-	-	309	4	0.75	0	18	0	-4,-5	-	-	4.89	MINOR
ENSMUSG00000095024	Gm5458	ENSMUST00000096121	ENSMUSP00000093833	TRANSLATION	protein_coding	-	CCDS49405.1	2	204	0	0	0.5	74.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000021738	Atxn7	ENSMUST00000223880	ENSMUSP00000152934	TRANSLATION	protein_coding	-	CCDS26823.1	-	867	8	1.95	0.5	92.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000021738	Atxn7	ENSMUST00000223714	ENSMUSP00000153613	TRANSLATION	protein_coding	-	-	-	920	8	1.95	0.5	92.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000021738	Atxn7	ENSMUST00000224315	ENSMUSP00000153048	TRANSLATION	protein_coding	start	-	-	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000021738	Atxn7	ENSMUST00000226073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021738	Atxn7	ENSMUST00000022257	ENSMUSP00000022257	TRANSLATION	protein_coding	-	CCDS26823.1	1	867	8	1.95	0.5	92.8	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000021738	Atxn7	ENSMUST00000223932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021738	Atxn7	ENSMUST00000224370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000021738	Atxn7	ENSMUST00000225164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000021738	Atxn7	ENSMUST00000224616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095371	Gm9611	ENSMUST00000100698	ENSMUSP00000098263	TRANSLATION	protein_coding	start/stop	-	5	77	0	0	0	29.7	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000095371	Gm9611	ENSMUST00000169972	ENSMUSP00000129118	TRANSLATION	protein_coding	start	-	5	213	0	0	0	85.4	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000092036	Gm2244	ENSMUST00000164372	ENSMUSP00000128646	TRANSLATION	protein_coding	-	-	1	218	0	0	0.5	71.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016541	Atxn10	ENSMUST00000163242	ENSMUSP00000132450	TRANSLATION	protein_coding	-	CCDS37170.1	1	475	0	0	3.9	119.5	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000116378	Gcat	ENSMUST00000171999	ENSMUSP00000131649	TRANSLATION	protein_coding,RT	-	CCDS49666.1	1	382	15	7.44	0.5	212.8	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000052369	Tmem106c	ENSMUST00000230005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052369	Tmem106c	ENSMUST00000230361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052369	Tmem106c	ENSMUST00000230144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052369	Tmem106c	ENSMUST00000229428	ENSMUSP00000154819	TRANSLATION	protein_coding	-	CCDS27785.1	-	260	2	0	1.5	339.5	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000052369	Tmem106c	ENSMUST00000231144	ENSMUSP00000155384	TRANSLATION	protein_coding	stop	-	-	166	2	0	0	231.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000052369	Tmem106c	ENSMUST00000230072	ENSMUSP00000155091	TRANSLATION	protein_coding	stop	-	-	116	2	0	0	157.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000052369	Tmem106c	ENSMUST00000064200	ENSMUSP00000069764	TRANSLATION	protein_coding	-	CCDS27785.1	1	260	2	0	1.5	339.5	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000052369	Tmem106c	ENSMUST00000231079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052369	Tmem106c	ENSMUST00000229433	ENSMUSP00000154837	TRANSLATION	protein_coding	stop	-	-	165	2	0	0	231.7	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000016664	Pacsin2	ENSMUST00000230960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016664	Pacsin2	ENSMUST00000230030	ENSMUSP00000155333	TRANSLATION	protein_coding	start	-	-	272	0	5.83	0	59.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016664	Pacsin2	ENSMUST00000230816	ENSMUSP00000155068	TRANSLATION	protein_coding	stop	-	-	191	6	4.75	0	63.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016664	Pacsin2	ENSMUST00000230679	ENSMUSP00000155481	TRANSLATION	protein_coding	-	CCDS27701.1	-	486	6	11.08	11.5	122.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016664	Pacsin2	ENSMUST00000171436	ENSMUSP00000131504	TRANSLATION	protein_coding	-	CCDS27701.1	5	486	6	11.08	11.5	122.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016664	Pacsin2	ENSMUST00000056177	ENSMUSP00000058320	TRANSLATION	protein_coding	-	CCDS27701.1	1	486	6	11.08	11.5	122.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016664	Pacsin2	ENSMUST00000231043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016664	Pacsin2	ENSMUST00000231946	ENSMUSP00000155925	TRANSLATION	protein_coding	start	-	-	180	0	4	0	59.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016664	Pacsin2	ENSMUST00000229337	ENSMUSP00000155845	TRANSLATION	protein_coding	stop	-	-	124	6	2.75	0	63.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016664	Pacsin2	ENSMUST00000231184	ENSMUSP00000155334	TRANSLATION	protein_coding	-	CCDS27701.1	-	486	6	11.08	11.5	122.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000016664	Pacsin2	ENSMUST00000165095	ENSMUSP00000130098	TRANSLATION	protein_coding	-	CCDS27701.1	1	486	6	11.08	11.5	122.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037353	Letmd1	ENSMUST00000230294	ENSMUSP00000155807	TRANSLATION	protein_coding	-	-	-	203	0	1.2	0.5	153.4	0	-4,-2	-	-	7.08	MINOR
ENSMUSG00000037353	Letmd1	ENSMUST00000229457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000229372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000229648	ENSMUSP00000155084	TRANSLATION	protein_coding	-	-	-	271	0	1.2	0.5	225.7	1	-4,-7	-	-	11.418	ALTERNATIVE:2
ENSMUSG00000037353	Letmd1	ENSMUST00000037001	ENSMUSP00000037546	TRANSLATION	protein_coding	-	CCDS27838.1	1	360	0	1.2	1.5	235.4	1	-2,2	-	-	12	PRINCIPAL:2
ENSMUSG00000037353	Letmd1	ENSMUST00000231001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000229596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000230339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000230579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037353	Letmd1	ENSMUST00000229012	ENSMUSP00000155243	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000063268	Parp10	ENSMUST00000166151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063268	Parp10	ENSMUST00000165738	ENSMUSP00000129765	TRANSLATION	protein_coding	-	CCDS49650.1	1	960	0	5.13	0.5	113.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063268	Parp10	ENSMUST00000170851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063268	Parp10	ENSMUST00000075689	ENSMUSP00000075110	TRANSLATION	protein_coding	-	CCDS49650.1	1	960	0	5.13	0.5	113.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063268	Parp10	ENSMUST00000170226	ENSMUSP00000131370	TRANSLATION	nonsense_mediated_decay	start	-	2	110	0	1.33	0	52.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000063268	Parp10	ENSMUST00000169255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022329	Stk3	ENSMUST00000018476	ENSMUSP00000018476	TRANSLATION	protein_coding	-	CCDS37059.1	1	497	19	7.014	4.7	328.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022329	Stk3	ENSMUST00000226555	ENSMUSP00000154154	TRANSLATION	protein_coding	-	-	-	495	19	6.75	0	328.2	0	-4,-5	-	-	17.472	MINOR
ENSMUSG00000022329	Stk3	ENSMUST00000128425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022329	Stk3	ENSMUST00000226730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022329	Stk3	ENSMUST00000067033	ENSMUSP00000064225	TRANSLATION	protein_coding	-	-	1	427	11	5.264	0	272.6	0	-4,-5	-	-	5.832	MINOR
ENSMUSG00000022329	Stk3	ENSMUST00000138841	ENSMUSP00000116310	TRANSLATION	nonsense_mediated_decay	-	-	5	38	1	1.014	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022408	Fam83f	ENSMUST00000023044	ENSMUSP00000023044	TRANSLATION	protein_coding	-	CCDS49672.1	1	495	0	2	0.5	359.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000000531	Grasp	ENSMUST00000000543	ENSMUSP00000000543	TRANSLATION	protein_coding	-	CCDS27847.1	1	392	0	3.3	3.9	47.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000038591	Colec10	ENSMUST00000036737	ENSMUSP00000037867	TRANSLATION	protein_coding	-	CCDS27469.1	1	277	10	2.75	6.3	90.1	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000062373	Tmem65	ENSMUST00000226578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062373	Tmem65	ENSMUST00000072113	ENSMUSP00000071984	TRANSLATION	protein_coding	-	CCDS27493.1	1	234	0	0	1.7	157.4	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000022429	Dmc1	ENSMUST00000230121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022429	Dmc1	ENSMUST00000023065	ENSMUSP00000023065	TRANSLATION	protein_coding	-	CCDS27644.1	1	340	7	9.75	7.5	365.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022429	Dmc1	ENSMUST00000229472	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022429	Dmc1	ENSMUST00000229408	ENSMUSP00000155228	TRANSLATION	protein_coding	-	-	-	285	7	8	4.1	263.9	0	-4,-5	-	-	9.933	MINOR
ENSMUSG00000022429	Dmc1	ENSMUST00000230011	ENSMUSP00000154933	TRANSLATION	nonsense_mediated_decay	-	-	-	109	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022602	Arc	ENSMUST00000023268	ENSMUSP00000023268	TRANSLATION	protein_coding	-	CCDS37102.1	1	396	0	0.6	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000022602	Arc	ENSMUST00000110009	ENSMUSP00000105636	TRANSLATION	protein_coding	-	CCDS37102.1	1	396	0	0.6	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060992	Copz1	ENSMUST00000230417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060992	Copz1	ENSMUST00000100162	ENSMUSP00000097738	TRANSLATION	protein_coding	-	CCDS27901.1	1	177	0	5.58	16.2	155.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000060992	Copz1	ENSMUST00000230893	ENSMUSP00000155674	TRANSLATION	protein_coding	-	-	-	163	0	5.08	0	155.7	0	-4,-6	-	-	10.998	MINOR
ENSMUSG00000060992	Copz1	ENSMUST00000229549	ENSMUSP00000154922	TRANSLATION	nonsense_mediated_decay	-	-	-	84	0	1.83	0	38.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022353	Mtss1	ENSMUST00000227238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022353	Mtss1	ENSMUST00000228365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022353	Mtss1	ENSMUST00000226976	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022353	Mtss1	ENSMUST00000227797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022353	Mtss1	ENSMUST00000227290	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022353	Mtss1	ENSMUST00000226923	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022353	Mtss1	ENSMUST00000228655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022353	Mtss1	ENSMUST00000226393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022353	Mtss1	ENSMUST00000227196	ENSMUSP00000154064	TRANSLATION	protein_coding	start/stop	-	-	242	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022353	Mtss1	ENSMUST00000227045	ENSMUSP00000154093	TRANSLATION	protein_coding	start/stop	-	-	162	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022353	Mtss1	ENSMUST00000228067	ENSMUSP00000153850	TRANSLATION	protein_coding	start/stop	-	-	204	0	1.83	0	51.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022353	Mtss1	ENSMUST00000080371	ENSMUSP00000079239	TRANSLATION	protein_coding	-	CCDS27496.1	1	759	0	7.78	6.4	376.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000040452	Cdh12	ENSMUST00000075132	ENSMUSP00000074632	TRANSLATION	protein_coding	-	CCDS27396.1	1	794	46	8.84	12.8	436.9	1	1,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040452	Cdh12	ENSMUST00000227496	ENSMUSP00000153750	TRANSLATION	protein_coding	-	CCDS27396.1	-	794	46	8.84	12.8	436.9	1	1,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040452	Cdh12	ENSMUST00000226407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042895	Abra	ENSMUST00000054742	ENSMUSP00000051973	TRANSLATION	protein_coding	-	CCDS27449.1	1	375	0	1	1.5	112.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067594	Krt77	ENSMUST00000087996	ENSMUSP00000085311	TRANSLATION	protein_coding	-	CCDS27865.1	1	572	0	4.69	0.5	483.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000067594	Krt77	ENSMUST00000229995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022425	Enpp2	ENSMUST00000227483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022425	Enpp2	ENSMUST00000226339	ENSMUSP00000154729	TRANSLATION	protein_coding	stop	-	-	118	0	1.33	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000022425	Enpp2	ENSMUST00000228823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022425	Enpp2	ENSMUST00000041591	ENSMUSP00000036180	TRANSLATION	protein_coding	-	CCDS27472.1	1	862	15	21.91	6.3	377.5	1	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000022425	Enpp2	ENSMUST00000173516	ENSMUSP00000133877	TRANSLATION	protein_coding	-	CCDS70629.1	1	910	15	21.41	4.1	365.4	1	0,-3	-	-	17.442	MINOR
ENSMUSG00000022425	Enpp2	ENSMUST00000167541	ENSMUSP00000132640	TRANSLATION	protein_coding	-	CCDS70628.1	1	887	15	21.535	5.3	377.5	1	0,-3	-	-	18.872	MINOR
ENSMUSG00000022425	Enpp2	ENSMUST00000228222	ENSMUSP00000154470	TRANSLATION	protein_coding	stop	-	-	62	3	2	0	89.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022425	Enpp2	ENSMUST00000227057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022425	Enpp2	ENSMUST00000171545	ENSMUSP00000128941	TRANSLATION	protein_coding	-	CCDS49607.1	1	914	15	21.41	5.3	365.4	1	0,-3	-	-	17.894	MINOR
ENSMUSG00000042292	Mrtfa	ENSMUST00000135047	ENSMUSP00000118451	TRANSLATION	protein_coding	stop	-	1	705	0	3.25	0	109.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042292	Mrtfa	ENSMUST00000154797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042292	Mrtfa	ENSMUST00000109579	ENSMUSP00000105207	TRANSLATION	protein_coding	-	CCDS37147.1	1	964	0	3.75	1.5	139.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000042292	Mrtfa	ENSMUST00000145779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042292	Mrtfa	ENSMUST00000134469	ENSMUSP00000119530	TRANSLATION	protein_coding	-	-	5	1029	0	3.75	0	139.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042292	Mrtfa	ENSMUST00000138769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042292	Mrtfa	ENSMUST00000239267	ENSMUSP00000159228	TRANSLATION	protein_coding	stop	-	-	108	0	1	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042292	Mrtfa	ENSMUST00000147921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042292	Mrtfa	ENSMUST00000239114	ENSMUSP00000159052	TRANSLATION	protein_coding	-	-	-	1029	0	3.75	0	139.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042292	Mrtfa	ENSMUST00000131235	ENSMUSP00000120116	TRANSLATION	protein_coding	-	-	5	979	0	3.75	0	139.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042292	Mrtfa	ENSMUST00000149582	ENSMUSP00000117745	TRANSLATION	protein_coding	-	CCDS49674.1	1	929	0	3.25	1.5	109.9	0	-4,-2	-	-	9.246	MINOR
ENSMUSG00000042292	Mrtfa	ENSMUST00000123243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036298	Slc2a13	ENSMUST00000109283	ENSMUSP00000104906	TRANSLATION	protein_coding	-	CCDS27761.2	1	637	0	3.8	1.5	379.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036298	Slc2a13	ENSMUST00000109282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036298	Slc2a13	ENSMUST00000156971	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071757	Zhx2	ENSMUST00000160990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071757	Zhx2	ENSMUST00000096430	ENSMUSP00000094164	TRANSLATION	protein_coding	-	CCDS27483.1	1	836	9	0	2.7	79	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000113558	Tmdd1	ENSMUST00000222611	ENSMUSP00000152149	TRANSLATION	protein_coding	-	-	-	351	0	0	0	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000033576	Apol6	ENSMUST00000149569	ENSMUSP00000120866	TRANSLATION	protein_coding	-	CCDS49655.1	1	321	0	0	0.5	245.8	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033576	Apol6	ENSMUST00000127957	ENSMUSP00000118257	TRANSLATION	protein_coding	-	CCDS49656.1	2	329	0	0	0.5	245.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033576	Apol6	ENSMUST00000148197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033576	Apol6	ENSMUST00000129468	ENSMUSP00000123663	TRANSLATION	protein_coding	stop	-	2	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033576	Apol6	ENSMUST00000139304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033576	Apol6	ENSMUST00000142405	ENSMUSP00000117135	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033576	Apol6	ENSMUST00000152949	ENSMUSP00000121308	TRANSLATION	protein_coding	stop	-	3	262	0	0	0	220.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022262	Dnah5	ENSMUST00000067048	ENSMUSP00000069751	TRANSLATION	protein_coding	-	CCDS27404.1	5	4621	65	33.6	0.5	3033.7	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000039704	Lmbrd2	ENSMUST00000090380	ENSMUSP00000087858	TRANSLATION	protein_coding	-	-	1	649	0	0	0	393	7	-1,-5	-	-	0	MINOR
ENSMUSG00000039704	Lmbrd2	ENSMUST00000226149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039704	Lmbrd2	ENSMUST00000227556	ENSMUSP00000154020	TRANSLATION	protein_coding	-	CCDS37039.1	-	694	0	0	8.8	627.8	8	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000039704	Lmbrd2	ENSMUST00000227216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056487	Mettl7a2	ENSMUST00000088142	ENSMUSP00000085467	TRANSLATION	protein_coding	-	CCDS27836.1	1	244	17	0.68	1.5	75.2	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000056487	Mettl7a2	ENSMUST00000176287	ENSMUSP00000135213	TRANSLATION	protein_coding	-	-	1	244	17	0.2	1.5	65.5	1	1,-3	-	-	12.99	MINOR
ENSMUSG00000049521	Cdc42ep1	ENSMUST00000059619	ENSMUSP00000060930	TRANSLATION	protein_coding	-	CCDS27624.1	1	409	0	0	0.5	90.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000023043	Krt18	ENSMUST00000023803	ENSMUSP00000023803	TRANSLATION	protein_coding	-	CCDS27869.1	1	423	0	4.02	0.5	350.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000018893	Mb	ENSMUST00000019037	ENSMUSP00000019037	TRANSLATION	protein_coding	-	CCDS27597.1	2	154	19	4.25	10.3	76.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018893	Mb	ENSMUST00000230031	ENSMUSP00000154870	TRANSLATION	protein_coding	-	-	-	99	15	2.5	0	28.9	0	-4,-5	-	-	8.106	MINOR
ENSMUSG00000018893	Mb	ENSMUST00000166179	ENSMUSP00000128399	TRANSLATION	protein_coding	-	CCDS27597.1	1	154	19	4.25	10.3	76.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018893	Mb	ENSMUST00000229125	ENSMUSP00000155252	TRANSLATION	protein_coding	stop	-	-	83	9	2.5	0	60.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018893	Mb	ENSMUST00000169226	ENSMUSP00000125995	TRANSLATION	protein_coding	-	CCDS27597.1	1	154	19	4.25	10.3	76.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018893	Mb	ENSMUST00000229423	ENSMUSP00000155115	TRANSLATION	protein_coding	-	CCDS27597.1	-	154	19	4.25	10.3	76.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000071711	Mpst	ENSMUST00000229791	ENSMUSP00000155018	TRANSLATION	protein_coding	stop	-	-	55	0	1	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000071711	Mpst	ENSMUST00000169133	ENSMUSP00000128075	TRANSLATION	protein_coding	-	CCDS27615.1	5	297	5	4	7.5	102.9	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000071711	Mpst	ENSMUST00000167140	ENSMUSP00000130493	TRANSLATION	protein_coding	-	CCDS27615.1	5	297	5	4	7.5	102.9	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000071711	Mpst	ENSMUST00000231159	ENSMUSP00000155399	TRANSLATION	protein_coding	stop	-	-	169	2	2	0	57.5	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000071711	Mpst	ENSMUST00000229739	ENSMUSP00000155371	TRANSLATION	protein_coding	-	CCDS27615.1	-	297	5	4	7.5	102.9	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000071711	Mpst	ENSMUST00000043865	ENSMUSP00000043061	TRANSLATION	protein_coding	-	CCDS27615.1	1	297	5	4	7.5	102.9	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000024479	Mal2	ENSMUST00000025356	ENSMUSP00000025356	TRANSLATION	protein_coding	-	CCDS27470.1	1	175	0	0	7.6	64	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000068101	Cenpm	ENSMUST00000229747	ENSMUSP00000155143	TRANSLATION	protein_coding	stop	-	-	69	0	2.25	1.2	108.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068101	Cenpm	ENSMUST00000089155	ENSMUSP00000086558	TRANSLATION	protein_coding	-	CCDS37156.1	1	168	0	3.5	0.5	165.9	0	-4,-7	-	-	1.998	MINOR
ENSMUSG00000068101	Cenpm	ENSMUST00000229041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068101	Cenpm	ENSMUST00000229505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068101	Cenpm	ENSMUST00000230408	ENSMUSP00000155788	TRANSLATION	protein_coding	stop	-	-	116	0	3.75	0	175.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068101	Cenpm	ENSMUST00000089157	ENSMUSP00000086560	TRANSLATION	protein_coding	-	CCDS27685.1	1	180	0	5.5	7.5	267.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000022248	Rad1	ENSMUST00000169519	ENSMUSP00000126645	TRANSLATION	protein_coding	stop	-	1	133	0	3.75	0	118.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022248	Rad1	ENSMUST00000022856	ENSMUSP00000022856	TRANSLATION	protein_coding	-	CCDS27379.1	1	280	0	6.83	13	274.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022248	Rad1	ENSMUST00000170531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022248	Rad1	ENSMUST00000168408	ENSMUSP00000132747	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	2	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022248	Rad1	ENSMUST00000170100	ENSMUSP00000128601	TRANSLATION	nonsense_mediated_decay	start	-	2	163	0	3.75	0	167	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022248	Rad1	ENSMUST00000100775	ENSMUSP00000098338	TRANSLATION	protein_coding	-	CCDS70618.1	1	272	0	5.99	0.5	221	0	-4,-5	-	-	7.092	MINOR
ENSMUSG00000064284	Cdpf1	ENSMUST00000134631	ENSMUSP00000121889	TRANSLATION	protein_coding	-	CCDS27722.1	5	119	4	0	1.5	128.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000064284	Cdpf1	ENSMUST00000154814	ENSMUSP00000116823	TRANSLATION	protein_coding	stop	-	2	84	2	0	0	79	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064284	Cdpf1	ENSMUST00000144067	ENSMUSP00000119728	TRANSLATION	protein_coding	-	CCDS27722.1	2	119	4	0	1.5	128.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000064284	Cdpf1	ENSMUST00000125947	ENSMUSP00000114528	TRANSLATION	protein_coding	-	CCDS27722.1	2	119	4	0	1.5	128.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000064284	Cdpf1	ENSMUST00000071876	ENSMUSP00000071772	TRANSLATION	protein_coding	-	CCDS27722.1	1	119	4	0	1.5	128.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000064284	Cdpf1	ENSMUST00000150995	ENSMUSP00000123174	TRANSLATION	protein_coding	-	CCDS27722.1	3	119	4	0	1.5	128.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000023013	Aqp2	ENSMUST00000023752	ENSMUSP00000023752	TRANSLATION	protein_coding	-	CCDS27822.1	1	271	0	3.75	7.5	268.1	0	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000055022	Cntn1	ENSMUST00000141187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055022	Cntn1	ENSMUST00000169825	ENSMUSP00000133063	TRANSLATION	protein_coding	-	CCDS27763.1	5	1020	0	19.548	5.3	334.2	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055022	Cntn1	ENSMUST00000068378	ENSMUSP00000067842	TRANSLATION	protein_coding	-	CCDS27763.1	1	1020	0	19.548	5.3	334.2	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055022	Cntn1	ENSMUST00000000109	ENSMUSP00000000109	TRANSLATION	protein_coding	-	CCDS27763.1	1	1020	0	19.548	5.3	334.2	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000036661	Dennd3	ENSMUST00000162488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036661	Dennd3	ENSMUST00000159322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036661	Dennd3	ENSMUST00000043414	ENSMUSP00000046774	TRANSLATION	protein_coding	-	CCDS37100.1	1	1274	0	4.35	0.5	170.8	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036661	Dennd3	ENSMUST00000160267	ENSMUSP00000124538	TRANSLATION	nonsense_mediated_decay	start	-	3	134	0	0.28	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036661	Dennd3	ENSMUST00000173292	ENSMUSP00000134002	TRANSLATION	nonsense_mediated_decay	-	-	1	1139	0	3.67	0	170.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036661	Dennd3	ENSMUST00000160727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036661	Dennd3	ENSMUST00000162824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072663	Spef2	ENSMUST00000159093	ENSMUSP00000124891	TRANSLATION	protein_coding	stop	-	5	622	7	0	0	80.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000072663	Spef2	ENSMUST00000160236	ENSMUSP00000124222	TRANSLATION	protein_coding	-	-	5	1724	11	1.75	0	114	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000072663	Spef2	ENSMUST00000208854	ENSMUSP00000146967	TRANSLATION	protein_coding	-	-	5	2076	11	1.75	0	114	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000072663	Spef2	ENSMUST00000159368	ENSMUSP00000124723	TRANSLATION	protein_coding	-	CCDS84163.1	1	456	0	0	0.5	80.3	0	-4,-7	-	-	3.978	MINOR
ENSMUSG00000072663	Spef2	ENSMUST00000162780	ENSMUSP00000124393	TRANSLATION	protein_coding	-	-	5	513	0	0	1	80.3	0	-4,-7	-	-	3.978	MINOR
ENSMUSG00000072663	Spef2	ENSMUST00000041840	ENSMUSP00000035762	TRANSLATION	protein_coding	-	CCDS37041.1	1	875	11	1.75	0.5	114	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000003970	Rpl8	ENSMUST00000229591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003970	Rpl8	ENSMUST00000229183	ENSMUSP00000155657	TRANSLATION	protein_coding	-	CCDS27595.1	-	257	0	4.16	19.5	231.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000003970	Rpl8	ENSMUST00000004072	ENSMUSP00000004072	TRANSLATION	protein_coding	-	CCDS27595.1	1	257	0	4.16	19.5	231.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000033837	Foxh1	ENSMUST00000037824	ENSMUSP00000036591	TRANSLATION	protein_coding	-	CCDS27584.1	1	401	0	1.6	1.5	85.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033837	Foxh1	ENSMUST00000230207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044217	Aqp5	ENSMUST00000088200	ENSMUSP00000085530	TRANSLATION	protein_coding	-	CCDS27823.1	1	265	6	4.5	5.1	246.5	9	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000044217	Aqp5	ENSMUST00000230998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044217	Aqp5	ENSMUST00000231163	ENSMUSP00000155212	TRANSLATION	protein_coding	-	-	-	148	1	3.5	0	124.3	6	-4,-6	-	-	5.004	MINOR
ENSMUSG00000044217	Aqp5	ENSMUST00000229264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044217	Aqp5	ENSMUST00000169082	ENSMUSP00000127611	TRANSLATION	protein_coding	-	CCDS27823.1	1	265	6	4.5	5.1	246.5	9	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000044217	Aqp5	ENSMUST00000229728	ENSMUSP00000155623	TRANSLATION	protein_coding	-	-	-	241	5	1.44	0	120	3	0,-3	-	-	4.998	MINOR
ENSMUSG00000116358	Gm49450	ENSMUST00000134214	ENSMUSP00000155021	TRANSLATION	protein_coding,RT	stop	-	5	267	22	3	0	234.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000116079	Gm36245	ENSMUST00000230670	ENSMUSP00000155154	TRANSLATION	protein_coding	-	-	-	93	0	0	0	30.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000000552	Zfp385a	ENSMUST00000229551	ENSMUSP00000155501	TRANSLATION	protein_coding	-	-	-	347	12	0	0.5	91.6	0	-4,-2	-	-	12	MINOR
ENSMUSG00000000552	Zfp385a	ENSMUST00000229373	ENSMUSP00000155498	TRANSLATION	protein_coding	-	-	-	366	12	0	7.5	91.6	0	-4,-7	-	-	15	ALTERNATIVE:1
ENSMUSG00000000552	Zfp385a	ENSMUST00000168828	ENSMUSP00000130176	TRANSLATION	protein_coding	-	CCDS49743.1	1	386	12	0	7.5	91.6	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000096852	Cyp2d12	ENSMUST00000230859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096852	Cyp2d12	ENSMUST00000068861	ENSMUSP00000071064	TRANSLATION	protein_coding	-	CCDS37160.1	1	504	30	9.18	1.5	472.5	2	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096852	Cyp2d12	ENSMUST00000229904	ENSMUSP00000154856	TRANSLATION	protein_coding	-	-	-	453	26	8.18	0.5	412.5	2	-2,-5	-	-	9.738	MINOR
ENSMUSG00000096852	Cyp2d12	ENSMUST00000228974	ENSMUSP00000154885	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	0.705	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000096852	Cyp2d12	ENSMUST00000229988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096852	Cyp2d12	ENSMUST00000229103	ENSMUSP00000155031	TRANSLATION	protein_coding	stop	-	-	158	2	3.25	0	53.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096852	Cyp2d12	ENSMUST00000229792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091780	Sco2	ENSMUST00000228977	ENSMUSP00000155150	TRANSLATION	protein_coding	-	CCDS49701.1	-	255	7	1	1.5	0	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000091780	Sco2	ENSMUST00000167643	ENSMUSP00000131943	TRANSLATION	protein_coding	-	CCDS49701.1	1	255	7	1	1.5	0	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000045631	Tmprss12	ENSMUST00000096200	ENSMUSP00000093914	TRANSLATION	protein_coding	-	CCDS49732.1	1	336	9	3.5	0.5	203.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000045631	Tmprss12	ENSMUST00000230901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000228990	ENSMUSP00000155349	TRANSLATION	nonsense_mediated_decay	-	-	-	143	0	0	0	36	0	-4,0	-	-	-1	MINOR
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000230372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000229507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000230559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000231059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116138	C030006K11Rik	ENSMUST00000036247	ENSMUSP00000039910	TRANSLATION	protein_coding	-	CCDS27591.1	1	218	0	0	2.9	263.3	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000013846	St3gal1	ENSMUST00000092640	ENSMUSP00000090307	TRANSLATION	protein_coding	-	CCDS27511.1	1	337	17	5.3	5.1	267.4	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013846	St3gal1	ENSMUST00000229028	ENSMUSP00000154853	TRANSLATION	protein_coding	-	CCDS27511.1	-	337	17	5.3	5.1	267.4	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000013846	St3gal1	ENSMUST00000230150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013846	St3gal1	ENSMUST00000229742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013846	St3gal1	ENSMUST00000229213	ENSMUSP00000155359	TRANSLATION	protein_coding	-	CCDS27511.1	-	337	17	5.3	5.1	267.4	0	-1,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033020	Polr2f	ENSMUST00000229973	ENSMUSP00000155409	TRANSLATION	nonsense_mediated_decay	-	-	-	98	0	3.08	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033020	Polr2f	ENSMUST00000229762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033020	Polr2f	ENSMUST00000040077	ENSMUSP00000043566	TRANSLATION	protein_coding	-	-	1	112	0	3.33	0	0	0	-4,-5	-	-	4.998	MINOR
ENSMUSG00000033020	Polr2f	ENSMUST00000229978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033020	Polr2f	ENSMUST00000230271	ENSMUSP00000155332	TRANSLATION	protein_coding	-	CCDS27634.1	-	127	0	3.83	19.5	57.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050963	Kcns2	ENSMUST00000072868	ENSMUSP00000072645	TRANSLATION	protein_coding	-	CCDS27421.1	1	477	0	0.48	13.6	247.4	3	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050963	Kcns2	ENSMUST00000228725	ENSMUSP00000153984	TRANSLATION	protein_coding	-	CCDS27421.1	-	477	0	0.48	13.6	247.4	3	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022142	Nup155	ENSMUST00000163765	ENSMUSP00000128819	TRANSLATION	protein_coding	-	CCDS37034.1	1	1391	0	33.8	5.3	421.6	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022142	Nup155	ENSMUST00000229466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022142	Nup155	ENSMUST00000229039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022142	Nup155	ENSMUST00000230017	ENSMUSP00000155093	TRANSLATION	protein_coding	-	-	-	1346	0	32.8	0	421.6	0	-2,-5	-	-	10.002	MINOR
ENSMUSG00000022142	Nup155	ENSMUST00000230925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022142	Nup155	ENSMUST00000230337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022142	Nup155	ENSMUST00000230647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000230557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000231037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000230822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000231042	ENSMUSP00000155098	TRANSLATION	nonsense_mediated_decay	-	-	-	89	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034022	Cpsf1	ENSMUST00000229798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034022	Cpsf1	ENSMUST00000229504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000230157	ENSMUSP00000155308	TRANSLATION	protein_coding	-	-	-	1450	0	8.915	0.5	307.2	0	-4,-5	-	-	11.472	MINOR
ENSMUSG00000034022	Cpsf1	ENSMUST00000231009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000229797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034022	Cpsf1	ENSMUST00000229269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034022	Cpsf1	ENSMUST00000230903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034022	Cpsf1	ENSMUST00000231191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034022	Cpsf1	ENSMUST00000071898	ENSMUSP00000071794	TRANSLATION	protein_coding	-	CCDS27577.1	1	1441	0	9.179	5.1	307.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000034022	Cpsf1	ENSMUST00000229287	ENSMUSP00000155746	TRANSLATION	protein_coding	start	-	-	121	0	1.684	0	64.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034022	Cpsf1	ENSMUST00000230149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068220	Lgals1	ENSMUST00000229159	ENSMUSP00000155144	TRANSLATION	nonsense_mediated_decay	-	-	-	35	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068220	Lgals1	ENSMUST00000089377	ENSMUSP00000086795	TRANSLATION	protein_coding	-	CCDS27628.1	1	135	8	2.75	11.5	101.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000058655	Eif4b	ENSMUST00000169681	ENSMUSP00000127774	TRANSLATION	protein_coding	-	CCDS49737.1	1	611	0	2.5	6.3	48.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000058655	Eif4b	ENSMUST00000229400	ENSMUSP00000155206	TRANSLATION	protein_coding	-	-	-	403	0	2.5	0	48.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000058655	Eif4b	ENSMUST00000229254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058655	Eif4b	ENSMUST00000229122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022479	Vdr	ENSMUST00000173611	ENSMUSP00000133351	TRANSLATION	protein_coding	stop	-	5	17	0	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022479	Vdr	ENSMUST00000023119	ENSMUSP00000023119	TRANSLATION	protein_coding	-	CCDS27784.1	1	422	25	7.9	1.5	179.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022479	Vdr	ENSMUST00000139656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022479	Vdr	ENSMUST00000126568	ENSMUSP00000116842	TRANSLATION	protein_coding	stop	-	3	75	6	1.6	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022479	Vdr	ENSMUST00000173104	ENSMUSP00000134584	TRANSLATION	protein_coding	stop	-	2	51	4	0.85	2	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022479	Vdr	ENSMUST00000174633	ENSMUSP00000133682	TRANSLATION	protein_coding	stop	-	2	21	0	0.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035891	Cerk	ENSMUST00000044332	ENSMUSP00000038203	TRANSLATION	protein_coding	-	CCDS27728.1	1	531	10	3.403	1.5	101.4	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035891	Cerk	ENSMUST00000150767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035891	Cerk	ENSMUST00000156546	ENSMUSP00000119472	TRANSLATION	protein_coding	-	-	1	226	0	0.798	0	0	0	-4,-5	-	-	0.792	MINOR
ENSMUSG00000022149	C9	ENSMUST00000127196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022149	C9	ENSMUST00000022749	ENSMUSP00000022749	TRANSLATION	protein_coding	-	-	1	548	6	8.78	0	178.7	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000022149	C9	ENSMUST00000128097	ENSMUSP00000135614	TRANSLATION	nonsense_mediated_decay	start	-	5	67	0	0	0	0	0	2,-4	-	-	-1	MINOR
ENSMUSG00000022149	C9	ENSMUST00000147905	ENSMUSP00000135459	TRANSLATION	protein_coding	start	-	3	103	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022149	C9	ENSMUST00000239466	ENSMUSP00000159308	TRANSLATION	protein_coding	-	CCDS27367.1	-	561	6	8.78	0.5	178.7	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000022200	Golph3	ENSMUST00000227895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022200	Golph3	ENSMUST00000226517	ENSMUSP00000153929	TRANSLATION	protein_coding	-	-	-	81	0	0.8	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000022200	Golph3	ENSMUST00000059680	ENSMUSP00000057375	TRANSLATION	protein_coding	-	CCDS27389.1	1	298	0	4.13	10.1	204.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000022200	Golph3	ENSMUST00000228671	ENSMUSP00000154500	TRANSLATION	protein_coding	-	-	-	162	0	2.8	0	109	0	-4,-2	-	-	3.624	MINOR
ENSMUSG00000022200	Golph3	ENSMUST00000228301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033088	Triobp	ENSMUST00000129922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033088	Triobp	ENSMUST00000109687	ENSMUSP00000105309	TRANSLATION	protein_coding	-	CCDS37138.1	1	627	0	2.358	1.5	61.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000033088	Triobp	ENSMUST00000130663	ENSMUSP00000122988	TRANSLATION	protein_coding	start	-	5	402	0	2.358	0	61.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033088	Triobp	ENSMUST00000144151	ENSMUSP00000116765	TRANSLATION	protein_coding	stop	-	3	98	0	1.828	0	59.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033088	Triobp	ENSMUST00000109689	ENSMUSP00000105311	TRANSLATION	protein_coding	-	CCDS37137.1	1	1968	0	2.358	0.5	61.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033088	Triobp	ENSMUST00000229270	ENSMUSP00000155650	TRANSLATION	protein_coding	start/stop	-	-	248	0	2.358	0	61.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033088	Triobp	ENSMUST00000140228	ENSMUSP00000155397	TRANSLATION	protein_coding	-	-	1	980	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033088	Triobp	ENSMUST00000109688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033088	Triobp	ENSMUST00000109690	ENSMUSP00000105312	TRANSLATION	protein_coding	-	CCDS37136.1	1	2014	0	2.358	0.5	61.4	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000033088	Triobp	ENSMUST00000229535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033088	Triobp	ENSMUST00000137934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033088	Triobp	ENSMUST00000229943	ENSMUSP00000155796	TRANSLATION	protein_coding	stop	-	-	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059460	Olfr286	ENSMUST00000205305	ENSMUSP00000154542	TRANSLATION	protein_coding	start	-	-	322	0	0.32	3.9	174.2	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000059460	Olfr286	ENSMUST00000205393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059460	Olfr286	ENSMUST00000206621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059460	Olfr286	ENSMUST00000073612	ENSMUSP00000154601	TRANSLATION	protein_coding	-	-	3	324	0	0.32	3.9	174.2	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000033762	Recql4	ENSMUST00000230724	ENSMUSP00000154957	TRANSLATION	nonsense_mediated_decay	-	-	-	195	0	1.85	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033762	Recql4	ENSMUST00000229360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033762	Recql4	ENSMUST00000036852	ENSMUSP00000044363	TRANSLATION	protein_coding	-	CCDS27588.1	1	1216	13	7.19	1.5	138.8	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033762	Recql4	ENSMUST00000230544	ENSMUSP00000155694	TRANSLATION	protein_coding	-	-	-	1173	13	5.54	0.5	138.8	0	-4,-6	-	-	14.7	MINOR
ENSMUSG00000058586	Serhl	ENSMUST00000167389	ENSMUSP00000128251	TRANSLATION	protein_coding	stop	-	5	53	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058586	Serhl	ENSMUST00000078218	ENSMUSP00000077345	TRANSLATION	protein_coding	-	CCDS49682.1	1	311	10	4.72	0.5	66.2	0	-4,-7	-	-	17.4	PRINCIPAL:2
ENSMUSG00000058586	Serhl	ENSMUST00000167635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000142265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058586	Serhl	ENSMUST00000169702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000169461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000172101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000167645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000170891	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058586	Serhl	ENSMUST00000164817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000168029	ENSMUSP00000128802	TRANSLATION	protein_coding	stop	-	3	99	4	2.66	0	40.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058586	Serhl	ENSMUST00000171488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058586	Serhl	ENSMUST00000165371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058586	Serhl	ENSMUST00000166427	ENSMUSP00000132686	TRANSLATION	protein_coding	-	-	1	321	10	5.02	0	66.1	0	-4,-5	-	-	17.988	ALTERNATIVE:2
ENSMUSG00000058586	Serhl	ENSMUST00000167862	ENSMUSP00000132086	TRANSLATION	protein_coding	stop	-	3	38	0	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058586	Serhl	ENSMUST00000169814	ENSMUSP00000127495	TRANSLATION	nonsense_mediated_decay	start	-	3	59	1	0.57	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058586	Serhl	ENSMUST00000167750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058586	Serhl	ENSMUST00000171212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018008	Cyth4	ENSMUST00000230583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018008	Cyth4	ENSMUST00000229248	ENSMUSP00000155708	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000231168	ENSMUSP00000155690	TRANSLATION	nonsense_mediated_decay	-	-	-	184	0	3.71	0	137.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000229796	ENSMUSP00000155451	TRANSLATION	protein_coding	stop	-	-	60	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000229295	ENSMUSP00000155432	TRANSLATION	protein_coding	stop	-	-	66	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000229233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018008	Cyth4	ENSMUST00000230705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018008	Cyth4	ENSMUST00000230041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018008	Cyth4	ENSMUST00000229717	ENSMUSP00000155352	TRANSLATION	nonsense_mediated_decay	-	-	-	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000231176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018008	Cyth4	ENSMUST00000231180	ENSMUSP00000154995	TRANSLATION	protein_coding	-	-	-	56	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000018008	Cyth4	ENSMUST00000043069	ENSMUSP00000042698	TRANSLATION	protein_coding	-	CCDS27620.1	1	393	12	8.96	8.8	306.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018008	Cyth4	ENSMUST00000229256	ENSMUSP00000155122	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022551	Cyc1	ENSMUST00000229292	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022551	Cyc1	ENSMUST00000229710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022551	Cyc1	ENSMUST00000230706	ENSMUSP00000155129	TRANSLATION	protein_coding	stop	-	-	30	0	0.75	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000022551	Cyc1	ENSMUST00000023210	ENSMUSP00000023210	TRANSLATION	protein_coding	-	CCDS27567.1	1	325	30	8.75	6.3	324.4	0	-2,2	-	-	20	PRINCIPAL:1
ENSMUSG00000022551	Cyc1	ENSMUST00000229946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022551	Cyc1	ENSMUST00000231045	ENSMUSP00000155170	TRANSLATION	protein_coding	stop	-	-	165	18	4.25	0	201.5	0	0,-2	-	-	-1	MINOR
ENSMUSG00000022551	Cyc1	ENSMUST00000229013	ENSMUSP00000155655	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	1.066	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000022579	Gpihbp1	ENSMUST00000023243	ENSMUSP00000023243	TRANSLATION	protein_coding	-	CCDS27545.1	1	228	0	0	0.5	22.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022579	Gpihbp1	ENSMUST00000189944	ENSMUSP00000139511	TRANSLATION	protein_coding	-	CCDS84173.1	2	123	0	0	0.5	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000022579	Gpihbp1	ENSMUST00000189874	ENSMUSP00000139792	TRANSLATION	protein_coding	-	-	1	111	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000022579	Gpihbp1	ENSMUST00000190119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022579	Gpihbp1	ENSMUST00000186934	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096883	Shisa8	ENSMUST00000179269	ENSMUSP00000137002	TRANSLATION	protein_coding	-	CCDS56994.1	1	399	0	0.2	1.5	107.4	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000096883	Shisa8	ENSMUST00000229543	ENSMUSP00000155616	TRANSLATION	protein_coding	stop	-	-	242	0	0	0	0	0	-3,0	-	-	-1	MINOR
ENSMUSG00000022471	Xrcc6	ENSMUST00000230729	ENSMUSP00000155606	TRANSLATION	protein_coding	-	-	-	263	0	6	0	233.7	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022471	Xrcc6	ENSMUST00000164779	ENSMUSP00000127927	TRANSLATION	protein_coding	stop	-	3	97	0	2.08	0	96.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022471	Xrcc6	ENSMUST00000170630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022471	Xrcc6	ENSMUST00000170907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022471	Xrcc6	ENSMUST00000166311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022471	Xrcc6	ENSMUST00000164975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022471	Xrcc6	ENSMUST00000100399	ENSMUSP00000097968	TRANSLATION	protein_coding	-	CCDS37153.1	1	608	0	13.355	3.9	559.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022471	Xrcc6	ENSMUST00000168581	ENSMUSP00000129628	TRANSLATION	protein_coding	stop	-	5	27	0	0.75	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022471	Xrcc6	ENSMUST00000164920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022471	Xrcc6	ENSMUST00000069530	ENSMUSP00000068559	TRANSLATION	protein_coding	-	CCDS37153.1	1	608	0	13.355	3.9	559.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022471	Xrcc6	ENSMUST00000164775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022471	Xrcc6	ENSMUST00000165777	ENSMUSP00000131212	TRANSLATION	protein_coding	stop	-	5	106	0	2.525	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033128	Gga1	ENSMUST00000041587	ENSMUSP00000035992	TRANSLATION	protein_coding	-	CCDS27625.1	1	635	5	12.7	3.9	313.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033128	Gga1	ENSMUST00000230772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033128	Gga1	ENSMUST00000229353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033128	Gga1	ENSMUST00000230243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033128	Gga1	ENSMUST00000230192	ENSMUSP00000155780	TRANSLATION	nonsense_mediated_decay	-	-	-	363	0	8.5	0	220.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051853	Arf3	ENSMUST00000053183	ENSMUSP00000050689	TRANSLATION	protein_coding	-	CCDS27804.1	1	181	19	4	20.2	263.2	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000051853	Arf3	ENSMUST00000129354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051853	Arf3	ENSMUST00000156572	ENSMUSP00000114739	TRANSLATION	protein_coding	stop	-	2	49	7	1	0	56.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023008	Fmnl3	ENSMUST00000088233	ENSMUSP00000085566	TRANSLATION	protein_coding	-	CCDS27819.1	1	1028	0	20.02	7.5	628.9	0	-4,-5	-	-	14.526	PRINCIPAL:3
ENSMUSG00000023008	Fmnl3	ENSMUST00000140368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023008	Fmnl3	ENSMUST00000081224	ENSMUSP00000079984	TRANSLATION	protein_coding	-	CCDS79408.1	1	976	0	19.02	5.3	636.8	0	-4,-5	-	-	11.988	MINOR
ENSMUSG00000023008	Fmnl3	ENSMUST00000120633	ENSMUSP00000113094	TRANSLATION	protein_coding	-	CCDS79409.1	5	1027	0	20.02	5.3	628.9	0	-4,-5	-	-	13.512	ALTERNATIVE:1
ENSMUSG00000023008	Fmnl3	ENSMUST00000139767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000555	Itga5	ENSMUST00000230460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000555	Itga5	ENSMUST00000023128	ENSMUSP00000023128	TRANSLATION	protein_coding	-	CCDS27903.1	1	1053	30	21.985	1.7	454.9	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000000555	Itga5	ENSMUST00000230775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000555	Itga5	ENSMUST00000215331	ENSMUSP00000148865	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0.8	0	0	0	0,2	-	-	-1	MINOR
ENSMUSG00000048077	H1f7	ENSMUST00000060855	ENSMUSP00000127616	TRANSLATION	protein_coding	-	CCDS49721.1	-	398	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000023004	Tuba1b	ENSMUST00000077577	ENSMUSP00000076777	TRANSLATION	protein_coding	-	CCDS37195.1	1	451	23	3	17.5	405.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000023004	Tuba1b	ENSMUST00000140969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022186	Oxct1	ENSMUST00000138927	ENSMUSP00000116343	TRANSLATION	protein_coding	-	-	1	486	16	13	0	395.5	0	-4,0	-	-	14.796	MINOR
ENSMUSG00000022186	Oxct1	ENSMUST00000133130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022186	Oxct1	ENSMUST00000131240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022186	Oxct1	ENSMUST00000124591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022186	Oxct1	ENSMUST00000110690	ENSMUSP00000106318	TRANSLATION	protein_coding	-	CCDS27361.1	1	520	16	14	6.3	415.6	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000094447	9430069I07Rik	ENSMUST00000179647	ENSMUSP00000136383	TRANSLATION	protein_coding	-	CCDS56978.1	5	111	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000094447	9430069I07Rik	ENSMUST00000227772	ENSMUSP00000154567	TRANSLATION	protein_coding	-	CCDS56978.1	-	111	0	0	0.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000078938	Syce3	ENSMUST00000167959	ENSMUSP00000131766	TRANSLATION	protein_coding	-	CCDS49703.1	1	88	0	2	7.5	134.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000078938	Syce3	ENSMUST00000109314	ENSMUSP00000104937	TRANSLATION	protein_coding	-	CCDS49703.1	1	88	0	2	7.5	134.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046434	Hnrnpa1	ENSMUST00000230171	ENSMUSP00000155833	TRANSLATION	nonsense_mediated_decay	-	-	-	320	0	5.42	7.5	194.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046434	Hnrnpa1	ENSMUST00000036004	ENSMUSP00000042658	TRANSLATION	protein_coding	-	CCDS37232.1	1	373	0	5.42	5.1	194.8	0	-4,-5	-	-	13.893	MINOR
ENSMUSG00000046434	Hnrnpa1	ENSMUST00000230489	ENSMUSP00000154865	TRANSLATION	nonsense_mediated_decay	-	-	-	373	0	5.42	5.1	194.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046434	Hnrnpa1	ENSMUST00000087351	ENSMUSP00000084609	TRANSLATION	protein_coding	-	CCDS37233.1	1	320	0	5.42	7.5	194.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046434	Hnrnpa1	ENSMUST00000231141	ENSMUSP00000155311	TRANSLATION	protein_coding	-	-	-	268	0	4.42	0	123.1	0	-4,-5	-	-	5.7	MINOR
ENSMUSG00000001655	Hoxc13	ENSMUST00000001700	ENSMUSP00000001700	TRANSLATION	protein_coding	-	CCDS27890.1	1	328	0	1	2.7	185	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062037	Olfr285	ENSMUST00000079736	ENSMUSP00000078672	TRANSLATION	protein_coding	-	CCDS27790.1	-	319	0	0.28	1.5	158.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062037	Olfr285	ENSMUST00000216901	ENSMUSP00000150788	TRANSLATION	protein_coding	-	CCDS27790.1	5	319	0	0.28	1.5	158.2	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022412	Mief1	ENSMUST00000231110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022412	Mief1	ENSMUST00000229138	ENSMUSP00000154875	TRANSLATION	protein_coding	-	CCDS27661.1	-	463	0	3.5	12.8	62.9	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022412	Mief1	ENSMUST00000229612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022412	Mief1	ENSMUST00000230654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022412	Mief1	ENSMUST00000166030	ENSMUSP00000129209	TRANSLATION	protein_coding	-	CCDS27661.1	1	463	0	3.5	12.8	62.9	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022412	Mief1	ENSMUST00000023048	ENSMUSP00000023048	TRANSLATION	protein_coding	-	CCDS27661.1	1	463	0	3.5	12.8	62.9	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022412	Mief1	ENSMUST00000228788	ENSMUSP00000154748	TRANSLATION	nonsense_mediated_decay	-	-	-	137	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000022412	Mief1	ENSMUST00000228965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022195	6030458C11Rik	ENSMUST00000228888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022195	6030458C11Rik	ENSMUST00000227299	ENSMUSP00000154605	TRANSLATION	protein_coding	-	-	-	358	0	0	0.5	113.5	0	-2,-5	-	-	0	MINOR
ENSMUSG00000022195	6030458C11Rik	ENSMUST00000228177	ENSMUSP00000154147	TRANSLATION	protein_coding	-	-	-	341	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000022195	6030458C11Rik	ENSMUST00000057256	ENSMUSP00000055656	TRANSLATION	protein_coding	-	CCDS27392.1	1	442	4	0	1.7	224.1	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000022195	6030458C11Rik	ENSMUST00000227821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054263	Lifr	ENSMUST00000226826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054263	Lifr	ENSMUST00000226471	ENSMUSP00000154750	TRANSLATION	protein_coding	-	CCDS27369.1	-	1092	0	12.25	1.5	29.4	1	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000054263	Lifr	ENSMUST00000164529	ENSMUSP00000131434	TRANSLATION	protein_coding	-	CCDS49577.1	1	719	0	11.53	0.5	29.4	0	-2,0	-	-	10.56	MINOR
ENSMUSG00000054263	Lifr	ENSMUST00000226934	ENSMUSP00000153968	TRANSLATION	nonsense_mediated_decay	-	-	-	719	0	11.53	0.5	29.4	0	-2,0	-	-	-1	MINOR
ENSMUSG00000054263	Lifr	ENSMUST00000067190	ENSMUSP00000064551	TRANSLATION	protein_coding	-	CCDS27369.1	1	1092	0	12.25	1.5	29.4	1	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000054263	Lifr	ENSMUST00000228723	ENSMUSP00000154715	TRANSLATION	protein_coding	stop	-	-	140	0	2.5	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000054263	Lifr	ENSMUST00000227727	ENSMUSP00000154181	TRANSLATION	protein_coding	-	CCDS49577.1	-	719	0	11.53	0.5	29.4	0	-2,0	-	-	10.56	MINOR
ENSMUSG00000054263	Lifr	ENSMUST00000171588	ENSMUSP00000126137	TRANSLATION	protein_coding	-	CCDS27369.1	5	1092	0	12.25	1.5	29.4	1	-2,0	-	-	12	PRINCIPAL:1
ENSMUSG00000023025	Larp4	ENSMUST00000057632	ENSMUSP00000086964	TRANSLATION	protein_coding	-	CCDS49730.1	1	718	0	3.03	1.5	62.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023025	Larp4	ENSMUST00000231128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023025	Larp4	ENSMUST00000229553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023025	Larp4	ENSMUST00000230521	ENSMUSP00000155529	TRANSLATION	nonsense_mediated_decay	-	-	-	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023025	Larp4	ENSMUST00000231160	ENSMUSP00000155661	TRANSLATION	protein_coding	-	-	-	660	0	3.03	1.7	62.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023025	Larp4	ENSMUST00000229426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023025	Larp4	ENSMUST00000100206	ENSMUSP00000097780	TRANSLATION	protein_coding	-	CCDS37208.1	1	719	0	3.03	1.5	62.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000023025	Larp4	ENSMUST00000230956	ENSMUSP00000155601	TRANSLATION	protein_coding	-	-	-	610	0	3.03	0	62.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023025	Larp4	ENSMUST00000229891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075600	Zc3h3	ENSMUST00000100538	ENSMUSP00000098106	TRANSLATION	protein_coding	-	CCDS27550.1	1	950	20	1.2	0.5	22.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000075600	Zc3h3	ENSMUST00000229000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075600	Zc3h3	ENSMUST00000229970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058794	Nfe2	ENSMUST00000154510	ENSMUSP00000116678	TRANSLATION	protein_coding	stop	-	2	108	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058794	Nfe2	ENSMUST00000132836	ENSMUSP00000120256	TRANSLATION	protein_coding	stop	-	2	164	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058794	Nfe2	ENSMUST00000132438	ENSMUSP00000116079	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058794	Nfe2	ENSMUST00000131364	ENSMUSP00000116158	TRANSLATION	protein_coding	stop	-	5	185	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058794	Nfe2	ENSMUST00000134554	ENSMUSP00000117474	TRANSLATION	protein_coding	-	CCDS27900.1	2	373	0	1	7.5	63.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000058794	Nfe2	ENSMUST00000075192	ENSMUSP00000074684	TRANSLATION	protein_coding	-	CCDS27900.1	1	373	0	1	7.5	63.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000058794	Nfe2	ENSMUST00000133600	ENSMUSP00000121817	TRANSLATION	protein_coding	-	-	5	396	0	1	0.5	63.3	0	-4,0	-	-	12	MINOR
ENSMUSG00000058794	Nfe2	ENSMUST00000149111	ENSMUSP00000122476	TRANSLATION	protein_coding	-	CCDS27900.1	1	373	0	1	7.5	63.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000058794	Nfe2	ENSMUST00000156927	ENSMUSP00000114160	TRANSLATION	protein_coding	-	CCDS27900.1	5	373	0	1	7.5	63.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000058794	Nfe2	ENSMUST00000134193	ENSMUSP00000123064	TRANSLATION	protein_coding	stop	-	3	202	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022994	Adcy6	ENSMUST00000228596	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022994	Adcy6	ENSMUST00000228566	ENSMUSP00000154421	TRANSLATION	protein_coding	-	-	-	1166	9	9.6	6.3	863.2	10	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000022994	Adcy6	ENSMUST00000226236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022994	Adcy6	ENSMUST00000096224	ENSMUSP00000093939	TRANSLATION	protein_coding	-	CCDS27799.1	1	1168	9	9.6	6.3	857.8	10	-4,-6	-	-	19.676	PRINCIPAL:2
ENSMUSG00000022994	Adcy6	ENSMUST00000228903	ENSMUSP00000154696	TRANSLATION	nonsense_mediated_decay	-	-	-	524	8	4	0	584.3	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000022994	Adcy6	ENSMUST00000226500	ENSMUSP00000154693	TRANSLATION	protein_coding	stop	-	-	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022994	Adcy6	ENSMUST00000227501	ENSMUSP00000154012	TRANSLATION	protein_coding	stop	-	-	194	0	0	0	105.1	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000022371	Col14a1	ENSMUST00000110217	ENSMUSP00000105846	TRANSLATION	protein_coding	-	-	5	1798	10	26.105	5.1	789	0	4,-1	-	-	19.53	ALTERNATIVE:1
ENSMUSG00000022371	Col14a1	ENSMUST00000023053	ENSMUSP00000023053	TRANSLATION	protein_coding	-	-	5	1797	10	26.105	5.1	787.1	0	4,-1	-	-	19.416	ALTERNATIVE:1
ENSMUSG00000022371	Col14a1	ENSMUST00000110221	ENSMUSP00000105850	TRANSLATION	protein_coding	-	CCDS37076.1	1	1794	10	26.105	6.3	789.3	0	4,-1	-	-	20	PRINCIPAL:2
ENSMUSG00000022371	Col14a1	ENSMUST00000125416	ENSMUSP00000122455	TRANSLATION	protein_coding	start	-	1	521	0	8.585	0	100.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230539	ENSMUSP00000155051	TRANSLATION	protein_coding	stop	-	-	186	0	4.08	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229918	ENSMUSP00000155072	TRANSLATION	protein_coding	-	-	-	335	0	8.084	9.5	183.9	0	-4,-5	-	-	14.43	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000230211	ENSMUSP00000155440	TRANSLATION	protein_coding	stop	-	-	190	0	4.08	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229746	ENSMUSP00000155016	TRANSLATION	protein_coding	stop	-	-	205	0	4.344	0	82.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229184	ENSMUSP00000155654	TRANSLATION	protein_coding	-	-	-	316	0	8.084	3.6	183.9	0	-4,-5	-	-	12.744	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229533	ENSMUSP00000155219	TRANSLATION	protein_coding	start/stop	-	-	225	0	4.844	0	81.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000078404	ENSMUSP00000077509	TRANSLATION	protein_coding	-	CCDS49741.1	2	362	0	8.084	11.5	183.9	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000230577	ENSMUSP00000155825	TRANSLATION	protein_coding	start/stop	-	-	264	0	4.674	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230682	ENSMUSP00000155638	TRANSLATION	protein_coding	start/stop	-	-	192	0	4.094	0	91.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056851	Pcbp2	ENSMUST00000230728	ENSMUSP00000155631	TRANSLATION	protein_coding	stop	-	-	280	0	5.424	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056851	Pcbp2	ENSMUST00000230114	ENSMUSP00000155789	TRANSLATION	protein_coding	-	-	-	361	0	8.084	11.5	183.9	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000229618	ENSMUSP00000155430	TRANSLATION	protein_coding	-	CCDS49742.1	-	331	0	8.084	11.5	183.9	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000229275	ENSMUSP00000155124	TRANSLATION	protein_coding	-	-	-	96	0	2.63	0	56.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229102	ENSMUSP00000155096	TRANSLATION	protein_coding	stop	-	-	224	0	5.16	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000108838	ENSMUSP00000104466	TRANSLATION	protein_coding	-	-	2	322	0	8.084	9.5	183.9	0	-4,-5	-	-	14.43	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000229854	ENSMUSP00000155038	TRANSLATION	protein_coding	-	CCDS27884.1	-	349	0	8.084	8.3	183.9	0	-4,-5	-	-	14.085	PRINCIPAL:3
ENSMUSG00000056851	Pcbp2	ENSMUST00000077037	ENSMUSP00000076294	TRANSLATION	protein_coding	-	CCDS49741.1	1	362	0	8.084	11.5	183.9	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000229802	ENSMUSP00000155292	TRANSLATION	protein_coding	-	-	-	335	0	8.084	9.5	183.9	0	-4,-5	-	-	14.43	ALTERNATIVE:1
ENSMUSG00000056851	Pcbp2	ENSMUST00000229222	ENSMUSP00000155240	TRANSLATION	protein_coding	stop	-	-	168	0	5.16	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229061	ENSMUSP00000154930	TRANSLATION	protein_coding	start	-	-	184	0	2.924	0	66.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056851	Pcbp2	ENSMUST00000231085	ENSMUSP00000155431	TRANSLATION	protein_coding	start	-	-	265	0	5.424	0	127.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056851	Pcbp2	ENSMUST00000230129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056851	Pcbp2	ENSMUST00000231089	ENSMUSP00000155548	TRANSLATION	protein_coding	stop	-	-	249	0	5.924	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229958	ENSMUSP00000155784	TRANSLATION	protein_coding	stop	-	-	241	0	5.16	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000230918	ENSMUSP00000155569	TRANSLATION	protein_coding	start/stop	-	-	231	0	5.174	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229219	ENSMUSP00000155730	TRANSLATION	protein_coding	start/stop	-	-	253	0	4.674	0	100.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056851	Pcbp2	ENSMUST00000229432	ENSMUSP00000155848	TRANSLATION	protein_coding	start	-	-	181	0	3.924	0	66.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005716	Pvalb	ENSMUST00000005860	ENSMUSP00000005860	TRANSLATION	protein_coding	-	CCDS27609.1	1	110	11	3.08	21.5	44.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005716	Pvalb	ENSMUST00000120592	ENSMUSP00000112598	TRANSLATION	protein_coding	-	CCDS27609.1	1	110	11	3.08	21.5	44.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022562	Oplah	ENSMUST00000210024	ENSMUSP00000148028	TRANSLATION	protein_coding	stop	-	5	253	0	1.04	0	197.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022562	Oplah	ENSMUST00000023222	ENSMUSP00000023222	TRANSLATION	protein_coding	-	CCDS27565.1	1	1288	0	10.61	2.7	1292.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022562	Oplah	ENSMUST00000163127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022562	Oplah	ENSMUST00000170063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022562	Oplah	ENSMUST00000169664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022562	Oplah	ENSMUST00000171340	ENSMUSP00000129100	TRANSLATION	protein_coding	-	CCDS27565.1	5	1288	0	10.61	2.7	1292.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022562	Oplah	ENSMUST00000170261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022562	Oplah	ENSMUST00000165279	ENSMUSP00000127955	TRANSLATION	protein_coding	stop	-	3	53	0	0.36	0	43.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022562	Oplah	ENSMUST00000163977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022562	Oplah	ENSMUST00000164189	ENSMUSP00000131967	TRANSLATION	protein_coding	stop	-	1	852	0	7.31	0	742.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022562	Oplah	ENSMUST00000230735	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091680	Klhdc7b	ENSMUST00000166926	ENSMUSP00000130884	TRANSLATION	protein_coding	-	CCDS49702.1	-	605	0	0.2	1.5	66.2	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000091680	Klhdc7b	ENSMUST00000225666	ENSMUSP00000153286	TRANSLATION	protein_coding	-	-	-	1263	0	0.2	0	66.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000079022	Col22a1	ENSMUST00000162081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079022	Col22a1	ENSMUST00000160513	ENSMUSP00000124270	TRANSLATION	protein_coding	start	-	3	203	0	5.73	0	77.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079022	Col22a1	ENSMUST00000159993	ENSMUSP00000125069	TRANSLATION	protein_coding	-	CCDS49627.1	5	1613	5	28.556	3.9	493	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000079022	Col22a1	ENSMUST00000229585	ENSMUSP00000155641	TRANSLATION	protein_coding	-	-	-	1058	0	23.596	0.5	340.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000000489	Pdgfb	ENSMUST00000229168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000489	Pdgfb	ENSMUST00000229795	ENSMUSP00000154843	TRANSLATION	protein_coding	stop	-	-	49	0	1.5	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000489	Pdgfb	ENSMUST00000229912	ENSMUSP00000155133	TRANSLATION	protein_coding	stop	-	-	169	0	4.58	0	127.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000489	Pdgfb	ENSMUST00000000500	ENSMUSP00000000500	TRANSLATION	protein_coding	-	CCDS27656.1	1	241	0	4.91	6.3	147.6	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000053929	Cyhr1	ENSMUST00000176274	ENSMUSP00000134739	TRANSLATION	protein_coding	-	CCDS70643.1	1	412	15	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000053929	Cyhr1	ENSMUST00000229524	ENSMUSP00000155816	TRANSLATION	protein_coding	-	-	-	272	15	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000053929	Cyhr1	ENSMUST00000081291	ENSMUSP00000080043	TRANSLATION	protein_coding	-	CCDS27581.1	1	311	13	0	1.8	0	0	0,-2	-	-	5.037	PRINCIPAL:3
ENSMUSG00000053929	Cyhr1	ENSMUST00000230719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053929	Cyhr1	ENSMUST00000177359	ENSMUSP00000135505	TRANSLATION	protein_coding	-	CCDS27582.1	1	192	0	0	7.5	0	0	-3,-4	-	-	3	MINOR
ENSMUSG00000053929	Cyhr1	ENSMUST00000231152	ENSMUSP00000155579	TRANSLATION	protein_coding	-	CCDS27582.1	-	192	0	0	7.5	0	0	-3,-4	-	-	3	MINOR
ENSMUSG00000053929	Cyhr1	ENSMUST00000229541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053929	Cyhr1	ENSMUST00000066677	ENSMUSP00000063317	TRANSLATION	protein_coding	-	CCDS27582.1	1	192	0	0	7.5	0	0	-3,-4	-	-	3	MINOR
ENSMUSG00000053929	Cyhr1	ENSMUST00000229552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046897	Zfp740	ENSMUST00000141465	ENSMUSP00000122698	TRANSLATION	protein_coding	stop	-	3	191	11	2.3	0	45.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000046897	Zfp740	ENSMUST00000119168	ENSMUSP00000113691	TRANSLATION	protein_coding	-	CCDS79415.1	1	144	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046897	Zfp740	ENSMUST00000230600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046897	Zfp740	ENSMUST00000139960	ENSMUSP00000117024	TRANSLATION	protein_coding	stop	-	5	107	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046897	Zfp740	ENSMUST00000119830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046897	Zfp740	ENSMUST00000229886	ENSMUSP00000155168	TRANSLATION	protein_coding	stop	-	-	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046897	Zfp740	ENSMUST00000118729	ENSMUSP00000112985	TRANSLATION	protein_coding	-	CCDS79416.1	1	168	11	2.4	2.9	45.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000046897	Zfp740	ENSMUST00000230867	ENSMUSP00000155827	TRANSLATION	protein_coding	-	-	-	143	11	2.4	0	45.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000046897	Zfp740	ENSMUST00000133986	ENSMUSP00000122429	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046897	Zfp740	ENSMUST00000119800	ENSMUSP00000113770	TRANSLATION	protein_coding	-	CCDS70672.1	1	180	11	2.4	1.5	45.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000046897	Zfp740	ENSMUST00000123528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046897	Zfp740	ENSMUST00000121206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063234	Gpr84	ENSMUST00000079824	ENSMUSP00000078753	TRANSLATION	protein_coding	-	CCDS27902.1	1	396	0	0.42	5.1	126.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000023021	Cers5	ENSMUST00000176970	ENSMUSP00000135723	TRANSLATION	protein_coding	start	-	5	203	0	0	0	42.5	12	-3,-5	-	-	-1	MINOR
ENSMUSG00000023021	Cers5	ENSMUST00000176627	ENSMUSP00000134988	TRANSLATION	protein_coding	stop	-	3	95	0	2	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023021	Cers5	ENSMUST00000109035	ENSMUSP00000104663	TRANSLATION	protein_coding	-	-	1	387	0	2	0	170	13	-1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000023021	Cers5	ENSMUST00000175876	ENSMUSP00000134845	TRANSLATION	protein_coding	stop	-	5	241	0	2	0	144.9	10	-4,-7	-	-	-1	MINOR
ENSMUSG00000023021	Cers5	ENSMUST00000176248	ENSMUSP00000135074	TRANSLATION	nonsense_mediated_decay	-	-	5	251	0	2	0	106.1	7	-1,-4	-	-	-1	MINOR
ENSMUSG00000023021	Cers5	ENSMUST00000023762	ENSMUSP00000023762	TRANSLATION	protein_coding	-	CCDS27830.1	1	414	0	2	1.5	170	13	-1,-4	-	-	12	PRINCIPAL:2
ENSMUSG00000038984	Tspyl5	ENSMUST00000042021	ENSMUSP00000045542	TRANSLATION	protein_coding	-	CCDS49591.1	-	406	0	0.6	0.5	68.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022435	Upk3a	ENSMUST00000023070	ENSMUSP00000023070	TRANSLATION	protein_coding	-	CCDS27716.1	1	287	0	0	5.3	0	0	3,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000022455	Wbp2nl	ENSMUST00000023089	ENSMUSP00000023089	TRANSLATION	protein_coding	-	CCDS37158.1	1	359	0	0	0.5	33.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054277	Arfgap3	ENSMUST00000226816	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054277	Arfgap3	ENSMUST00000226411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054277	Arfgap3	ENSMUST00000067215	ENSMUSP00000064893	TRANSLATION	protein_coding	-	CCDS49683.1	1	524	4	3.8	1.5	108.9	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000054277	Arfgap3	ENSMUST00000226764	ENSMUSP00000154365	TRANSLATION	protein_coding	start	-	-	105	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000054277	Arfgap3	ENSMUST00000227511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054277	Arfgap3	ENSMUST00000226124	ENSMUSP00000154712	TRANSLATION	protein_coding	-	-	-	523	4	3.8	0.5	108.9	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000033565	Rbfox2	ENSMUST00000228361	ENSMUSP00000154719	TRANSLATION	protein_coding	start/stop	-	-	300	0	3.41	0	114	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000227314	ENSMUSP00000154233	TRANSLATION	protein_coding	-	CCDS49657.1	-	378	0	3.41	2.5	203.3	0	-4,-5	-	-	11.934	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000111581	ENSMUSP00000129372	TRANSLATION	protein_coding	-	-	1	349	0	3.41	0.5	145.2	0	-4,-5	-	-	7.734	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000171751	ENSMUSP00000130739	TRANSLATION	protein_coding	-	CCDS49659.1	1	449	0	3.41	2.7	216.3	0	-4,-6	-	-	12.81	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000227533	ENSMUSP00000154209	TRANSLATION	protein_coding	-	-	-	346	0	2.41	0.5	159	0	-4,-5	-	-	6.564	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000048145	ENSMUSP00000048056	TRANSLATION	protein_coding	-	CCDS27598.1	1	435	0	3.41	3.9	145.2	0	-4,-6	-	-	9.114	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000166610	ENSMUSP00000130673	TRANSLATION	protein_coding	-	CCDS49658.1	1	381	0	3.41	2.9	216.3	0	-4,-5	-	-	12.906	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000228190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033565	Rbfox2	ENSMUST00000226877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033565	Rbfox2	ENSMUST00000228582	ENSMUSP00000154408	TRANSLATION	protein_coding	stop	-	-	201	0	1.5	0	21.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000228253	ENSMUSP00000154021	TRANSLATION	protein_coding	start	-	-	47	0	0	0	26.9	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000228558	ENSMUSP00000154522	TRANSLATION	protein_coding	stop	-	-	275	0	3.41	0	66	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000227930	ENSMUSP00000154810	TRANSLATION	protein_coding	-	-	-	283	0	0.91	0.5	150.3	0	-4,-5	-	-	3.042	MINOR
ENSMUSG00000033565	Rbfox2	ENSMUST00000230194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033565	Rbfox2	ENSMUST00000228087	ENSMUSP00000153751	TRANSLATION	protein_coding	-	-	-	377	0	3.41	7.3	215.4	0	-4,-5	-	-	14.946	PRINCIPAL:1
ENSMUSG00000022383	Ppara	ENSMUST00000109423	ENSMUSP00000105050	TRANSLATION	protein_coding	-	CCDS27721.1	1	468	8	5	7.5	147.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022383	Ppara	ENSMUST00000134880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022383	Ppara	ENSMUST00000138813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022383	Ppara	ENSMUST00000057979	ENSMUSP00000059719	TRANSLATION	protein_coding	-	CCDS27721.1	1	468	8	5	7.5	147.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022383	Ppara	ENSMUST00000109422	ENSMUSP00000105049	TRANSLATION	protein_coding	-	CCDS27721.1	1	468	8	5	7.5	147.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022383	Ppara	ENSMUST00000136453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098176	Ccdc166	ENSMUST00000182172	ENSMUSP00000138510	TRANSLATION	protein_coding	-	CCDS59620.1	-	211	0	0	0.5	25.8	0	-4,-6	-	-	1.896	MINOR
ENSMUSG00000098176	Ccdc166	ENSMUST00000183130	ENSMUSP00000138115	TRANSLATION	protein_coding	-	CCDS59621.1	2	449	0	0	0.5	81.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000023048	Prr13	ENSMUST00000171245	ENSMUSP00000132636	TRANSLATION	protein_coding	-	CCDS27883.1	1	137	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000023048	Prr13	ENSMUST00000164938	ENSMUSP00000129218	TRANSLATION	protein_coding	stop	-	2	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023048	Prr13	ENSMUST00000164957	ENSMUSP00000125784	TRANSLATION	protein_coding	-	CCDS27883.1	1	137	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000023048	Prr13	ENSMUST00000023810	ENSMUSP00000023810	TRANSLATION	protein_coding	-	CCDS27883.1	1	137	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000023048	Prr13	ENSMUST00000164688	ENSMUSP00000130498	TRANSLATION	protein_coding	-	CCDS27883.1	1	137	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000049382	Krt8	ENSMUST00000023952	ENSMUSP00000023952	TRANSLATION	protein_coding	-	CCDS27868.1	1	490	0	4.85	0.5	448.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000022991	Lalba	ENSMUST00000023726	ENSMUSP00000023726	TRANSLATION	protein_coding	-	CCDS27795.1	1	143	6	3.25	4.1	180.6	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000001289	Pfdn5	ENSMUST00000166658	ENSMUSP00000129178	TRANSLATION	protein_coding	-	CCDS37227.1	1	154	0	1.885	12	99.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001289	Pfdn5	ENSMUST00000165671	ENSMUSP00000128526	TRANSLATION	protein_coding	-	-	2	85	0	1.03	0	65	0	-4,-5	-	-	7.182	MINOR
ENSMUSG00000001289	Pfdn5	ENSMUST00000165717	ENSMUSP00000132441	TRANSLATION	protein_coding	stop	-	2	72	0	1.03	0	65	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001289	Pfdn5	ENSMUST00000169637	ENSMUSP00000128263	TRANSLATION	protein_coding	stop	-	5	60	0	0.63	0	60.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001289	Pfdn5	ENSMUST00000168805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001289	Pfdn5	ENSMUST00000170627	ENSMUSP00000131245	TRANSLATION	protein_coding	-	-	5	109	0	1.255	2.4	66.5	0	-4,-5	-	-	8.5	MINOR
ENSMUSG00000001289	Pfdn5	ENSMUST00000062492	ENSMUSP00000126970	TRANSLATION	protein_coding	-	-	3	85	0	1.03	0	65	0	-4,-5	-	-	7.182	MINOR
ENSMUSG00000001289	Pfdn5	ENSMUST00000001335	ENSMUSP00000001335	TRANSLATION	nonsense_mediated_decay	-	-	3	73	0	0.525	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039065	Atpsckmt	ENSMUST00000042702	ENSMUSP00000039094	TRANSLATION	protein_coding	-	CCDS27412.1	1	247	17	2.1	0.5	0	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000039065	Atpsckmt	ENSMUST00000161061	ENSMUSP00000124619	TRANSLATION	protein_coding	-	-	1	169	17	2.1	0.5	0	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039065	Atpsckmt	ENSMUST00000160146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022419	Deptor	ENSMUST00000226687	ENSMUSP00000154546	TRANSLATION	nonsense_mediated_decay	-	-	-	100	0	0.7	0	68.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022419	Deptor	ENSMUST00000023056	ENSMUSP00000023056	TRANSLATION	protein_coding	-	CCDS27475.1	1	397	0	4	0.5	156.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022419	Deptor	ENSMUST00000096433	ENSMUSP00000094167	TRANSLATION	protein_coding	-	CCDS27474.1	1	409	0	4	3.9	156.2	0	-4,-5	-	-	13	PRINCIPAL:4
ENSMUSG00000022419	Deptor	ENSMUST00000100660	ENSMUSP00000098225	TRANSLATION	protein_coding	-	-	1	401	0	3.2	0	156.2	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000048230	Fbxo43	ENSMUST00000227793	ENSMUSP00000154351	TRANSLATION	protein_coding	stop	-	-	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048230	Fbxo43	ENSMUST00000058643	ENSMUSP00000054125	TRANSLATION	protein_coding	-	CCDS37060.1	1	641	8	1.56	0.5	26.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048230	Fbxo43	ENSMUST00000227781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022181	C6	ENSMUST00000162585	ENSMUSP00000124417	TRANSLATION	protein_coding	-	CCDS37025.1	1	769	23	14.55	0.5	336.6	0	4,-1	-	-	12	MINOR
ENSMUSG00000022181	C6	ENSMUST00000022788	ENSMUSP00000022788	TRANSLATION	protein_coding	-	CCDS37025.1	5	769	23	14.55	0.5	336.6	0	4,-1	-	-	12	MINOR
ENSMUSG00000022181	C6	ENSMUST00000162729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022181	C6	ENSMUST00000161997	ENSMUSP00000125358	TRANSLATION	protein_coding	stop	-	1	261	13	5.5	0	104.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022181	C6	ENSMUST00000162350	ENSMUSP00000125693	TRANSLATION	protein_coding	-	-	5	934	23	17.55	0	336.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022358	Fbxo32	ENSMUST00000022986	ENSMUSP00000022986	TRANSLATION	protein_coding	-	CCDS27491.1	1	355	0	0	12	0	0	-4,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000022440	C1qtnf6	ENSMUST00000229185	ENSMUSP00000155221	TRANSLATION	protein_coding	-	-	-	100	0	0	0.5	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000022440	C1qtnf6	ENSMUST00000147093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022440	C1qtnf6	ENSMUST00000023075	ENSMUSP00000023075	TRANSLATION	protein_coding	-	CCDS37134.1	1	264	0	1.4	1.5	160.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022440	C1qtnf6	ENSMUST00000230943	ENSMUSP00000155188	TRANSLATION	protein_coding	stop	-	-	55	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022440	C1qtnf6	ENSMUST00000137827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056605	Krt72	ENSMUST00000127671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056605	Krt72	ENSMUST00000071104	ENSMUSP00000065922	TRANSLATION	protein_coding	-	CCDS27863.1	2	520	0	4.69	5.1	407.8	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000022586	Ly6i	ENSMUST00000166694	ENSMUSP00000129867	TRANSLATION	protein_coding	-	CCDS27539.1	1	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022586	Ly6i	ENSMUST00000023250	ENSMUSP00000023250	TRANSLATION	protein_coding	-	CCDS27539.1	1	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000037343	Taf2	ENSMUST00000041733	ENSMUSP00000043733	TRANSLATION	protein_coding	-	CCDS37075.1	1	1198	0	24.5	6.4	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000037343	Taf2	ENSMUST00000228360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037343	Taf2	ENSMUST00000227254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037343	Taf2	ENSMUST00000228896	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037343	Taf2	ENSMUST00000226864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037343	Taf2	ENSMUST00000228345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041841	Rpl37	ENSMUST00000227463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041841	Rpl37	ENSMUST00000045356	ENSMUSP00000046506	TRANSLATION	protein_coding	-	CCDS37027.1	1	97	4	1.15	10.8	93.2	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000041841	Rpl37	ENSMUST00000227635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041841	Rpl37	ENSMUST00000226758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041841	Rpl37	ENSMUST00000227674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041841	Rpl37	ENSMUST00000227111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022485	Hoxc5	ENSMUST00000001709	ENSMUSP00000001709	TRANSLATION	protein_coding	-	CCDS27896.1	1	222	0	1	7.5	75.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022485	Hoxc5	ENSMUST00000174869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000135388	ENSMUSP00000155515	TRANSLATION	protein_coding	-	CCDS27585.1	1	524	0	5.688	1.5	100.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000140730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000150399	ENSMUSP00000123458	TRANSLATION	nonsense_mediated_decay	-	-	1	242	0	3.14	0	52.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000127674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000143274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000037551	ENSMUSP00000037356	TRANSLATION	protein_coding	-	CCDS27585.1	1	524	0	5.688	1.5	100.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000134449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000156920	ENSMUSP00000124336	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000138951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033819	Ppp1r16a	ENSMUST00000129396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022574	Naprt	ENSMUST00000229571	ENSMUSP00000155290	TRANSLATION	nonsense_mediated_decay	-	-	-	344	8	6.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022574	Naprt	ENSMUST00000023237	ENSMUSP00000023237	TRANSLATION	protein_coding	-	CCDS27552.1	1	538	8	12	7.5	0	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022574	Naprt	ENSMUST00000230259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022574	Naprt	ENSMUST00000230739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022296	Baalc	ENSMUST00000226440	ENSMUSP00000154447	TRANSLATION	protein_coding	start	-	-	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022296	Baalc	ENSMUST00000163313	ENSMUSP00000132788	TRANSLATION	protein_coding	-	-	1	123	0	0	0	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000060311	Mucl1	ENSMUST00000078842	ENSMUSP00000154005	TRANSLATION	protein_coding	-	-	-	206	0	0	0	0	0	2,-2	-	-	0	PRINCIPAL:5
ENSMUSG00000060311	Mucl1	ENSMUST00000226484	ENSMUSP00000154525	TRANSLATION	protein_coding	-	-	-	175	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000047497	Adamts12	ENSMUST00000227189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047497	Adamts12	ENSMUST00000061318	ENSMUSP00000057796	TRANSLATION	protein_coding	-	CCDS27384.1	1	1600	18	8.51	1.5	484.1	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047497	Adamts12	ENSMUST00000228940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022565	Plec	ENSMUST00000169438	ENSMUSP00000127261	TRANSLATION	protein_coding	-	CCDS37117.2	1	4386	0	26.1	1.5	849.6	0	-4,-5	-	-	0.172	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000170728	ENSMUSP00000130948	TRANSLATION	protein_coding	stop	-	1	43	0	1.382	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000089610	ENSMUSP00000087037	TRANSLATION	protein_coding	-	CCDS49649.1	5	4589	0	31.24	1.5	924	0	-4,-5	-	-	6.172	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000165135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022565	Plec	ENSMUST00000169289	ENSMUSP00000126912	TRANSLATION	protein_coding	stop	-	1	499	0	11.25	0	79.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000071869	ENSMUSP00000071765	TRANSLATION	protein_coding	-	CCDS49648.1	1	4521	0	30.2	3.9	928.9	0	-4,-5	-	-	4.918	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000169714	ENSMUSP00000126526	TRANSLATION	protein_coding	-	CCDS49644.1	1	4543	0	30.28	3.9	928.9	0	-2,-3	-	-	5.08	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000171634	ENSMUSP00000126936	TRANSLATION	protein_coding	stop	-	1	964	0	20.13	0	304.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000169108	ENSMUSP00000126068	TRANSLATION	protein_coding	-	CCDS49646.1	1	4511	0	30.232	3.9	928.9	0	-4,-5	-	-	4.984	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000170915	ENSMUSP00000131946	TRANSLATION	protein_coding	stop	-	1	53	0	1.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000072692	ENSMUSP00000072478	TRANSLATION	protein_coding	-	CCDS37115.1	1	4550	0	30.1	1.5	928.9	0	-4,-6	-	-	3.892	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000171562	ENSMUSP00000129543	TRANSLATION	protein_coding	-	CCDS37117.2	1	4386	0	26.1	1.5	849.6	0	-4,-5	-	-	0.172	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000076442	ENSMUSP00000075772	TRANSLATION	protein_coding	-	CCDS37114.1	1	4686	0	30.9	1.5	1052.7	0	-4,-6	-	-	11.494	PRINCIPAL:3
ENSMUSG00000022565	Plec	ENSMUST00000023226	ENSMUSP00000023226	TRANSLATION	protein_coding	-	CCDS37116.1	1	4543	0	31.1	3.9	928.9	0	-4,-6	-	-	6.718	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000166428	ENSMUSP00000130915	TRANSLATION	protein_coding	stop	-	2	676	0	15.64	0	154.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000167754	ENSMUSP00000127867	TRANSLATION	protein_coding	stop	-	5	702	0	16.39	0	154.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000073418	ENSMUSP00000073124	TRANSLATION	protein_coding	-	CCDS49647.1	5	4691	0	30.9	1.5	1050.1	0	-4,-6	-	-	11.338	ALTERNATIVE:2
ENSMUSG00000022565	Plec	ENSMUST00000165210	ENSMUSP00000156565	TRANSLATION	protein_coding	start/stop	-	5	1646	0	12.92	0	325.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000054449	ENSMUSP00000057158	TRANSLATION	protein_coding	-	CCDS49645.1	5	4548	0	30.28	3.9	926.3	0	-2,-3	-	-	5.08	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000080857	ENSMUSP00000079668	TRANSLATION	protein_coding	-	CCDS37117.2	5	4386	0	26.1	1.5	849.6	0	-4,-5	-	-	0.172	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000165453	ENSMUSP00000127253	TRANSLATION	protein_coding	stop	-	1	661	0	15.43	0	156.6	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000022565	Plec	ENSMUST00000074834	ENSMUSP00000074383	TRANSLATION	protein_coding	-	CCDS37113.1	1	4534	0	30.28	2.7	928.9	0	-4,-5	-	-	4.666	MINOR
ENSMUSG00000033099	Nol12	ENSMUST00000123013	ENSMUSP00000121877	TRANSLATION	protein_coding	stop	-	5	83	0	0	0	39.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033099	Nol12	ENSMUST00000138880	ENSMUSP00000116103	TRANSLATION	protein_coding	-	CCDS27629.1	1	217	0	0	6.3	60.7	0	-4,-5	-	-	7.838	PRINCIPAL:1
ENSMUSG00000033099	Nol12	ENSMUST00000041164	ENSMUSP00000042908	TRANSLATION	protein_coding	start	-	3	195	0	0	0	62.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033099	Nol12	ENSMUST00000145157	ENSMUSP00000122905	TRANSLATION	protein_coding	stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079024	Gm21961	ENSMUST00000110100	ENSMUSP00000105727	TRANSLATION	protein_coding	start/stop	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022255	Mtdh	ENSMUST00000172082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022255	Mtdh	ENSMUST00000168991	ENSMUSP00000129500	TRANSLATION	nonsense_mediated_decay	-	-	5	164	0	0	0	178.5	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000022255	Mtdh	ENSMUST00000022865	ENSMUSP00000022865	TRANSLATION	protein_coding	-	CCDS27415.1	1	579	0	0	5.1	470.6	1	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000022255	Mtdh	ENSMUST00000170553	ENSMUSP00000126167	TRANSLATION	protein_coding	start/stop	-	5	220	0	0	0	154.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022255	Mtdh	ENSMUST00000170050	ENSMUSP00000128288	TRANSLATION	protein_coding	start/stop	-	5	382	0	0	0	303.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022255	Mtdh	ENSMUST00000163333	ENSMUSP00000130190	TRANSLATION	protein_coding	start	-	5	393	0	0	0	283.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022255	Mtdh	ENSMUST00000171711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022255	Mtdh	ENSMUST00000226331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022255	Mtdh	ENSMUST00000163697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022255	Mtdh	ENSMUST00000226992	ENSMUSP00000154553	TRANSLATION	nonsense_mediated_decay	start	-	-	91	0	0	0	44.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022255	Mtdh	ENSMUST00000172083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022255	Mtdh	ENSMUST00000169905	ENSMUSP00000131814	TRANSLATION	protein_coding	start/stop	-	5	356	0	0	0	139.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042524	Sun2	ENSMUST00000162064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042524	Sun2	ENSMUST00000159762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042524	Sun2	ENSMUST00000100439	ENSMUSP00000098006	TRANSLATION	protein_coding	-	CCDS56992.1	1	729	0	6.85	0.5	161.2	4	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042524	Sun2	ENSMUST00000046259	ENSMUSP00000047864	TRANSLATION	protein_coding	-	CCDS56993.1	1	731	0	6.85	0.5	161.2	4	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000042524	Sun2	ENSMUST00000162392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042524	Sun2	ENSMUST00000160355	ENSMUSP00000124495	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042524	Sun2	ENSMUST00000159660	ENSMUSP00000124504	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042524	Sun2	ENSMUST00000162499	ENSMUSP00000124515	TRANSLATION	protein_coding	stop	-	2	38	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042524	Sun2	ENSMUST00000231189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042524	Sun2	ENSMUST00000089311	ENSMUSP00000086724	TRANSLATION	protein_coding	-	CCDS27649.1	1	699	0	6.85	0.5	161.2	3	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000108728	OR5BS1P	ENSMUST00000216180	ENSMUSP00000153483	TRANSLATION	protein_coding	-	-	5	308	0	0.78	2.4	152.6	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037185	Krt80	ENSMUST00000230831	ENSMUSP00000155526	TRANSLATION	protein_coding	-	-	-	221	0	2.44	0	160.5	0	-4,-5	-	-	4.878	MINOR
ENSMUSG00000037185	Krt80	ENSMUST00000077196	ENSMUSP00000076437	TRANSLATION	protein_coding	-	CCDS37216.1	1	452	0	3	7.5	316.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000037185	Krt80	ENSMUST00000230107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037185	Krt80	ENSMUST00000229267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037185	Krt80	ENSMUST00000230909	ENSMUSP00000155346	TRANSLATION	protein_coding	-	-	-	399	0	2.8	0	244.5	0	-4,-6	-	-	7.296	MINOR
ENSMUSG00000048154	Kmt2d	ENSMUST00000191973	ENSMUSP00000142312	TRANSLATION	protein_coding	start	-	3	233	18	3.75	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048154	Kmt2d	ENSMUST00000178486	ENSMUSP00000135941	TRANSLATION	protein_coding	-	-	5	5588	56	9.84	0.5	375.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000048154	Kmt2d	ENSMUST00000023741	ENSMUSP00000023741	TRANSLATION	protein_coding	-	CCDS49725.2	5	5588	56	9.84	0.5	375.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000048154	Kmt2d	ENSMUST00000229651	ENSMUSP00000154984	TRANSLATION	nonsense_mediated_decay	start	-	-	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048154	Kmt2d	ENSMUST00000184363	ENSMUSP00000139020	TRANSLATION	protein_coding	start/stop	-	3	250	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000091119	Ccdc152	ENSMUST00000165386	ENSMUSP00000129305	TRANSLATION	protein_coding	-	CCDS49571.1	5	254	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000091119	Ccdc152	ENSMUST00000226261	ENSMUSP00000153730	TRANSLATION	protein_coding	-	CCDS49571.1	-	254	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000091119	Ccdc152	ENSMUST00000228405	ENSMUSP00000153740	TRANSLATION	protein_coding	stop	-	-	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044309	Apol7c	ENSMUST00000062562	ENSMUSP00000050745	TRANSLATION	protein_coding	-	CCDS37127.1	1	369	0	0	1.5	433.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044309	Apol7c	ENSMUST00000230863	ENSMUSP00000155510	TRANSLATION	protein_coding	stop	-	-	73	0	0	0	39.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036561	Ppp6r2	ENSMUST00000226221	ENSMUSP00000154297	TRANSLATION	protein_coding	-	-	-	170	0	0	0	58.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000036561	Ppp6r2	ENSMUST00000226875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036561	Ppp6r2	ENSMUST00000228284	ENSMUSP00000154087	TRANSLATION	protein_coding	-	CCDS27743.1	-	923	0	0	1.5	238.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036561	Ppp6r2	ENSMUST00000226967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036561	Ppp6r2	ENSMUST00000227011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036561	Ppp6r2	ENSMUST00000238818	ENSMUSP00000159040	TRANSLATION	protein_coding	-	-	-	950	0	0	0.5	238.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036561	Ppp6r2	ENSMUST00000088788	ENSMUSP00000086167	TRANSLATION	protein_coding	-	CCDS27743.1	5	923	0	0	1.5	238.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036561	Ppp6r2	ENSMUST00000226779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036561	Ppp6r2	ENSMUST00000227951	ENSMUSP00000154743	TRANSLATION	protein_coding	stop	-	-	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023169	Slc38a1	ENSMUST00000088454	ENSMUSP00000085801	TRANSLATION	protein_coding	-	CCDS27777.1	1	485	0	0	6.3	268	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000023169	Slc38a1	ENSMUST00000230756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023169	Slc38a1	ENSMUST00000100262	ENSMUSP00000097833	TRANSLATION	protein_coding	-	CCDS27777.1	1	485	0	0	6.3	268	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000023169	Slc38a1	ENSMUST00000229253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023169	Slc38a1	ENSMUST00000230607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023169	Slc38a1	ENSMUST00000230767	ENSMUSP00000155160	TRANSLATION	protein_coding	-	-	-	72	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023169	Slc38a1	ENSMUST00000088452	ENSMUSP00000085799	TRANSLATION	protein_coding	-	CCDS27777.1	1	485	0	0	6.3	268	8	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000022244	Amacr	ENSMUST00000070877	ENSMUSP00000066915	TRANSLATION	protein_coding	-	CCDS27381.1	1	381	16	4.6	1.7	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022244	Amacr	ENSMUST00000228886	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023022	Lima1	ENSMUST00000109024	ENSMUSP00000104652	TRANSLATION	protein_coding	-	CCDS37206.1	1	593	8	1.24	0.5	44.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000023022	Lima1	ENSMUST00000172119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023022	Lima1	ENSMUST00000073691	ENSMUSP00000073371	TRANSLATION	protein_coding	-	CCDS49729.1	1	753	8	1.24	0.5	44.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000023022	Lima1	ENSMUST00000171450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023022	Lima1	ENSMUST00000231121	ENSMUSP00000155772	TRANSLATION	protein_coding	stop	-	-	109	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000023022	Lima1	ENSMUST00000230033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043091	Tuba1c	ENSMUST00000058914	ENSMUSP00000051033	TRANSLATION	protein_coding	-	CCDS37198.1	1	449	23	3	16.2	404.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000043091	Tuba1c	ENSMUST00000230447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094806	Cyp2d10	ENSMUST00000072776	ENSMUSP00000072555	TRANSLATION	protein_coding	-	CCDS27690.1	1	504	30	9.812	1.5	472.7	2	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094806	Cyp2d10	ENSMUST00000229911	ENSMUSP00000155800	TRANSLATION	protein_coding	-	-	-	335	18	6.482	0	270.2	2	-1,-5	-	-	0	MINOR
ENSMUSG00000094806	Cyp2d10	ENSMUST00000230248	ENSMUSP00000155651	TRANSLATION	protein_coding	stop	-	-	130	1	2.68	0	66.3	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000094806	Cyp2d10	ENSMUST00000230843	ENSMUSP00000155572	TRANSLATION	protein_coding	start/stop	-	-	282	22	6.08	0	290.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094806	Cyp2d10	ENSMUST00000229628	ENSMUSP00000155493	TRANSLATION	nonsense_mediated_decay	-	-	-	176	5	3.35	0	114.9	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000094806	Cyp2d10	ENSMUST00000230198	ENSMUSP00000155626	TRANSLATION	protein_coding	-	-	-	450	27	7.68	0	335.6	2	-1,-5	-	-	5.736	MINOR
ENSMUSG00000037579	Kcnh3	ENSMUST00000228983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037579	Kcnh3	ENSMUST00000230552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037579	Kcnh3	ENSMUST00000041415	ENSMUSP00000040548	TRANSLATION	protein_coding	-	CCDS27817.1	1	1095	0	8.65	0.5	208.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037579	Kcnh3	ENSMUST00000230973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038622	Med30	ENSMUST00000228053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038622	Med30	ENSMUST00000037115	ENSMUSP00000042204	TRANSLATION	protein_coding	-	CCDS27465.1	1	178	0	0	12.8	216.3	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000022151	Ttc33	ENSMUST00000118193	ENSMUSP00000114033	TRANSLATION	protein_coding	-	CCDS27364.1	1	262	0	2.5	7.6	0	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000022151	Ttc33	ENSMUST00000144653	ENSMUSP00000122250	TRANSLATION	protein_coding	stop	-	3	163	0	2.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022151	Ttc33	ENSMUST00000141167	ENSMUSP00000121937	TRANSLATION	protein_coding	stop	-	5	116	0	1.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022151	Ttc33	ENSMUST00000081640	ENSMUSP00000080345	TRANSLATION	protein_coding	-	-	1	105	0	0.2	0	0	0	-4,-7	-	-	0.48	MINOR
ENSMUSG00000022151	Ttc33	ENSMUST00000022751	ENSMUSP00000022751	TRANSLATION	protein_coding	-	CCDS27364.1	1	262	0	2.5	7.6	0	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000022311	Csmd3	ENSMUST00000161173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022311	Csmd3	ENSMUST00000160655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022311	Csmd3	ENSMUST00000161653	ENSMUSP00000124195	TRANSLATION	protein_coding	start	-	1	2797	21	23.79	0	1582.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022311	Csmd3	ENSMUST00000162830	ENSMUSP00000124775	TRANSLATION	protein_coding	-	-	5	3707	35	28.66	7.6	2009.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000022311	Csmd3	ENSMUST00000100670	ENSMUSP00000098235	TRANSLATION	protein_coding	-	CCDS49602.1	5	3707	35	28.355	7.6	2009.3	0	-4,-6	-	-	20.388	PRINCIPAL:1
ENSMUSG00000022311	Csmd3	ENSMUST00000162006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022311	Csmd3	ENSMUST00000160716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022311	Csmd3	ENSMUST00000160658	ENSMUSP00000124753	TRANSLATION	protein_coding	-	-	5	3538	35	28.18	1.2	1978.8	0	-4,-6	-	-	15.3	MINOR
ENSMUSG00000022311	Csmd3	ENSMUST00000110261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055782	Abcd2	ENSMUST00000229909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055782	Abcd2	ENSMUST00000230461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055782	Abcd2	ENSMUST00000069511	ENSMUSP00000068940	TRANSLATION	protein_coding	-	CCDS27760.1	1	741	12	4.39	1.5	421.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000079025	Gsdmc	ENSMUST00000173503	ENSMUSP00000133683	TRANSLATION	protein_coding	-	-	5	459	0	5.309	0	522.6	0	-4,-5	-	-	9.972	MINOR
ENSMUSG00000079025	Gsdmc	ENSMUST00000110125	ENSMUSP00000105752	TRANSLATION	protein_coding	-	CCDS37086.1	1	468	0	5.309	0.5	556.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051793	Olfr284	ENSMUST00000063289	ENSMUSP00000065626	TRANSLATION	protein_coding	-	CCDS27791.1	-	305	0	0.42	5.1	182	8	-3,-6	-	-	12.848	PRINCIPAL:2
ENSMUSG00000051793	Olfr284	ENSMUST00000206647	ENSMUSP00000145864	TRANSLATION	protein_coding	-	-	-	321	0	0.52	0	182	8	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023030	Slc11a2	ENSMUST00000124324	ENSMUSP00000114702	TRANSLATION	protein_coding	start	-	2	220	0	3.315	0	129.3	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000023030	Slc11a2	ENSMUST00000154676	ENSMUSP00000115019	TRANSLATION	protein_coding	stop	-	5	50	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023030	Slc11a2	ENSMUST00000136168	ENSMUSP00000115283	TRANSLATION	nonsense_mediated_decay	-	-	3	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023030	Slc11a2	ENSMUST00000140535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023030	Slc11a2	ENSMUST00000154331	ENSMUSP00000115357	TRANSLATION	protein_coding	stop	-	1	110	0	0.198	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023030	Slc11a2	ENSMUST00000123461	ENSMUSP00000119056	TRANSLATION	protein_coding	stop	-	3	170	0	2.798	0	102.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000023030	Slc11a2	ENSMUST00000023774	ENSMUSP00000023774	TRANSLATION	protein_coding	-	CCDS37211.1	1	568	0	9.345	8.8	402.6	8	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023030	Slc11a2	ENSMUST00000138843	ENSMUSP00000116463	TRANSLATION	protein_coding	-	CCDS49733.1	1	561	0	9.345	4.1	402.6	8	-4,-5	-	-	13.191	MINOR
ENSMUSG00000039385	Cdh6	ENSMUST00000036439	ENSMUSP00000037113	TRANSLATION	protein_coding	-	CCDS27393.1	5	790	48	8.9	10.6	442.1	0	0,-4	-	-	21	PRINCIPAL:1
ENSMUSG00000039385	Cdh6	ENSMUST00000226917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089715	Cbx6	ENSMUST00000109623	ENSMUSP00000105252	TRANSLATION	protein_coding	-	-	5	133	0	2.555	0	59.6	0	-4,-5	-	-	8.526	MINOR
ENSMUSG00000089715	Cbx6	ENSMUST00000230681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089715	Cbx6	ENSMUST00000109625	ENSMUSP00000105253	TRANSLATION	protein_coding	-	-	1	396	0	2.66	0	113.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000089715	Cbx6	ENSMUST00000129614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089715	Cbx6	ENSMUST00000127721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089715	Cbx6	ENSMUST00000141345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089715	Cbx6	ENSMUST00000109627	ENSMUSP00000105255	TRANSLATION	protein_coding	-	CCDS37142.1	1	414	0	2.66	0.5	113.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000089715	Cbx6	ENSMUST00000148358	ENSMUSP00000119037	TRANSLATION	protein_coding	stop	-	2	127	0	2.1	0	59.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000089837	Npcd	ENSMUST00000089299	ENSMUSP00000086714	TRANSLATION	protein_coding,RT	-	CCDS27652.1	1	469	6	4.25	0.5	161.9	0	-4,-5	-	-	-1	PRINCIPAL:4
ENSMUSG00000089837	Npcd	ENSMUST00000023060	ENSMUSP00000023060	TRANSLATION	protein_coding,RT	-	CCDS27651.1	1	372	6	4.25	0.5	161.9	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000103906	Tigd5	ENSMUST00000192937	ENSMUSP00000141473	TRANSLATION	protein_coding	-	CCDS79379.1	-	642	0	0	0.5	144.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022201	Zfr	ENSMUST00000134277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022201	Zfr	ENSMUST00000122941	ENSMUSP00000118911	TRANSLATION	protein_coding	-	CCDS37044.2	1	1074	6	8	8.8	322	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000022201	Zfr	ENSMUST00000140787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022201	Zfr	ENSMUST00000155054	ENSMUSP00000114992	TRANSLATION	nonsense_mediated_decay	start	-	3	115	0	1.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022201	Zfr	ENSMUST00000128475	ENSMUSP00000117207	TRANSLATION	non_stop_decay	stop	-	3	351	3	0	0	22.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022201	Zfr	ENSMUST00000157034	ENSMUSP00000119524	TRANSLATION	nonsense_mediated_decay	start	-	5	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022201	Zfr	ENSMUST00000156752	ENSMUSP00000119251	TRANSLATION	protein_coding	start/stop	-	5	299	4	7.03	0	223.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022201	Zfr	ENSMUST00000147492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022201	Zfr	ENSMUST00000124621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022201	Zfr	ENSMUST00000228196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072664	Ugt3a1	ENSMUST00000176173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072664	Ugt3a1	ENSMUST00000145326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072664	Ugt3a1	ENSMUST00000022861	ENSMUSP00000022861	TRANSLATION	protein_coding	-	CCDS27374.1	1	523	16	1.64	0.5	324.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000072664	Ugt3a1	ENSMUST00000176878	ENSMUSP00000135760	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072664	Ugt3a1	ENSMUST00000175695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022490	Ppp1r1a	ENSMUST00000228813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022490	Ppp1r1a	ENSMUST00000023133	ENSMUSP00000023133	TRANSLATION	protein_coding	-	CCDS37237.1	1	171	0	0	3.9	138.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000022362	Gm29394	ENSMUST00000176076	ENSMUSP00000135503	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022362	Gm29394	ENSMUST00000177504	ENSMUSP00000135111	TRANSLATION	protein_coding	-	-	3	77	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000022362	Gm29394	ENSMUST00000176935	ENSMUSP00000134752	TRANSLATION	protein_coding,RT	-	-	2	199	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022362	Gm29394	ENSMUST00000177176	ENSMUSP00000135403	TRANSLATION	protein_coding,RT	stop	-	3	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049148	Plcxd3	ENSMUST00000130332	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049148	Plcxd3	ENSMUST00000061925	ENSMUSP00000053553	TRANSLATION	protein_coding	-	CCDS27362.2	1	321	5	0.76	15	0	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022439	Parvg	ENSMUST00000151072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022439	Parvg	ENSMUST00000163667	ENSMUSP00000131443	TRANSLATION	protein_coding	-	CCDS49686.1	5	384	0	4	0.5	101.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022439	Parvg	ENSMUST00000125928	ENSMUSP00000115109	TRANSLATION	protein_coding	stop	-	2	122	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022439	Parvg	ENSMUST00000023074	ENSMUSP00000023074	TRANSLATION	protein_coding	-	CCDS27710.1	1	331	0	4	1.5	101.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000022439	Parvg	ENSMUST00000127551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022439	Parvg	ENSMUST00000139235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022439	Parvg	ENSMUST00000145809	ENSMUSP00000154741	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	28.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033287	Kctd17	ENSMUST00000162517	ENSMUSP00000124290	TRANSLATION	protein_coding	-	CCDS79384.1	1	250	0	5.75	2.9	81.5	0	-4,-5	-	-	11.995	PRINCIPAL:4
ENSMUSG00000033287	Kctd17	ENSMUST00000162321	ENSMUSP00000125680	TRANSLATION	nonsense_mediated_decay	start	-	5	206	0	4.75	0	58.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033287	Kctd17	ENSMUST00000089414	ENSMUSP00000086835	TRANSLATION	protein_coding	-	-	5	296	0	5.75	1	81.5	0	-4,-5	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000033287	Kctd17	ENSMUST00000166142	ENSMUSP00000133210	TRANSLATION	protein_coding	-	CCDS79385.1	1	225	0	5.75	3.9	81.5	0	-4,-5	-	-	12.34	ALTERNATIVE:2
ENSMUSG00000033287	Kctd17	ENSMUST00000229622	ENSMUSP00000155227	TRANSLATION	protein_coding	start	-	-	173	0	4	0	39.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033287	Kctd17	ENSMUST00000160916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033287	Kctd17	ENSMUST00000229290	ENSMUSP00000155643	TRANSLATION	protein_coding	-	-	-	118	0	3.33	0	0	0	-4,-5	-	-	0.498	MINOR
ENSMUSG00000033287	Kctd17	ENSMUST00000161016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033287	Kctd17	ENSMUST00000162605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033287	Kctd17	ENSMUST00000159771	ENSMUSP00000125574	TRANSLATION	protein_coding	-	-	2	213	0	6.08	0	81.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033287	Kctd17	ENSMUST00000162808	ENSMUSP00000125421	TRANSLATION	protein_coding	start	-	5	210	0	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022288	4930447A16Rik	ENSMUST00000022897	ENSMUSP00000022897	TRANSLATION	protein_coding	-	CCDS56981.1	1	132	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000071715	Ncf4	ENSMUST00000126028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071715	Ncf4	ENSMUST00000148646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071715	Ncf4	ENSMUST00000096357	ENSMUSP00000094084	TRANSLATION	protein_coding	-	CCDS27610.1	1	339	0	8.08	8.8	186.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071715	Ncf4	ENSMUST00000133618	ENSMUSP00000121191	TRANSLATION	protein_coding	stop	-	5	252	0	6.33	0	118.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071715	Ncf4	ENSMUST00000146147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071715	Ncf4	ENSMUST00000147303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051225	Fam83a	ENSMUST00000160942	ENSMUSP00000125464	TRANSLATION	protein_coding	-	CCDS27486.2	5	436	0	3.2	3.9	332	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000051225	Fam83a	ENSMUST00000050374	ENSMUSP00000050051	TRANSLATION	protein_coding	-	-	1	258	0	2.6	1.2	263.1	0	-4,-7	-	-	6.735	MINOR
ENSMUSG00000051225	Fam83a	ENSMUST00000161231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023011	Faim2	ENSMUST00000231171	ENSMUSP00000155195	TRANSLATION	protein_coding	-	-	-	305	0	0	1.5	114.4	7	-4,-6	-	-	6.188	MINOR
ENSMUSG00000023011	Faim2	ENSMUST00000230603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023011	Faim2	ENSMUST00000229214	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023011	Faim2	ENSMUST00000231211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023011	Faim2	ENSMUST00000023750	ENSMUSP00000023750	TRANSLATION	protein_coding	-	CCDS37203.1	1	317	0	0	6.3	114.4	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000023011	Faim2	ENSMUST00000230837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048699	Krt90	ENSMUST00000023714	ENSMUSP00000023714	TRANSLATION	protein_coding	-	CCDS27855.1	1	538	0	5	1.5	460.8	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000042535	Gtpbp1	ENSMUST00000231095	ENSMUSP00000155592	TRANSLATION	nonsense_mediated_decay	start	-	-	137	5	1.58	0	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042535	Gtpbp1	ENSMUST00000230023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042535	Gtpbp1	ENSMUST00000046463	ENSMUSP00000043575	TRANSLATION	protein_coding	-	CCDS27648.1	1	668	19	6.564	8.8	83.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000042535	Gtpbp1	ENSMUST00000228991	ENSMUSP00000154947	TRANSLATION	protein_coding	start	-	-	201	0	2.07	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042535	Gtpbp1	ENSMUST00000230898	ENSMUSP00000155128	TRANSLATION	protein_coding	stop	-	-	80	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042535	Gtpbp1	ENSMUST00000229046	ENSMUSP00000155617	TRANSLATION	protein_coding	stop	-	-	145	11	1.064	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042535	Gtpbp1	ENSMUST00000230262	ENSMUSP00000155719	TRANSLATION	protein_coding	start/stop	-	-	174	3	1.344	0	30.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042535	Gtpbp1	ENSMUST00000230496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042535	Gtpbp1	ENSMUST00000229583	ENSMUSP00000155748	TRANSLATION	protein_coding	start	-	-	196	0	1.65	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000100967	Gm29666	ENSMUST00000189185	ENSMUSP00000140100	TRANSLATION	protein_coding	-	-	5	126	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022437	Samm50	ENSMUST00000230830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022437	Samm50	ENSMUST00000230668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022437	Samm50	ENSMUST00000229608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022437	Samm50	ENSMUST00000230498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022437	Samm50	ENSMUST00000023071	ENSMUSP00000023071	TRANSLATION	protein_coding	-	CCDS37166.1	1	469	0	5.86	14.8	219.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022437	Samm50	ENSMUST00000229751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022437	Samm50	ENSMUST00000230659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023039	Krt7	ENSMUST00000141190	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023039	Krt7	ENSMUST00000147662	ENSMUSP00000117046	TRANSLATION	protein_coding	stop	-	5	115	0	2.2	0	114.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023039	Krt7	ENSMUST00000153021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023039	Krt7	ENSMUST00000068904	ENSMUSP00000069900	TRANSLATION	protein_coding	-	CCDS27851.1	1	457	0	5.13	1.5	419	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000023039	Krt7	ENSMUST00000131069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003352	Cacnb3	ENSMUST00000229282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003352	Cacnb3	ENSMUST00000230064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003352	Cacnb3	ENSMUST00000229223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003352	Cacnb3	ENSMUST00000230769	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003352	Cacnb3	ENSMUST00000109150	ENSMUSP00000104778	TRANSLATION	protein_coding	-	CCDS37192.1	5	483	0	9.58	7.6	224.9	0	-4,-5	-	-	13.536	MINOR
ENSMUSG00000003352	Cacnb3	ENSMUST00000003442	ENSMUSP00000003442	TRANSLATION	protein_coding	-	-	1	457	0	9.33	0.5	203.4	0	-4,-5	-	-	9.21	MINOR
ENSMUSG00000003352	Cacnb3	ENSMUST00000230490	ENSMUSP00000155514	TRANSLATION	protein_coding	-	CCDS27800.1	-	484	0	10.08	8.8	224.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000115463	Gm49356	ENSMUST00000228787	ENSMUSP00000154571	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	69	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000022546	Gpt	ENSMUST00000229679	ENSMUSP00000155553	TRANSLATION	protein_coding	-	CCDS27586.1	-	496	17	11.46	3.9	117	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000022546	Gpt	ENSMUST00000229140	ENSMUSP00000155686	TRANSLATION	protein_coding	-	-	-	256	10	5.896	0	58.3	0	-4,-5	-	-	3.81	MINOR
ENSMUSG00000022546	Gpt	ENSMUST00000229734	ENSMUSP00000155491	TRANSLATION	nonsense_mediated_decay	-	-	-	363	13	7.55	0	55.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022546	Gpt	ENSMUST00000023203	ENSMUSP00000023203	TRANSLATION	protein_coding	-	CCDS27586.1	1	496	17	11.46	3.9	117	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000022546	Gpt	ENSMUST00000230482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022546	Gpt	ENSMUST00000230283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022546	Gpt	ENSMUST00000229340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022546	Gpt	ENSMUST00000231028	ENSMUSP00000155475	TRANSLATION	protein_coding	stop	-	-	233	6	5.13	0	31.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022546	Gpt	ENSMUST00000228987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022546	Gpt	ENSMUST00000229856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023052	Npff	ENSMUST00000184659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023052	Npff	ENSMUST00000023814	ENSMUSP00000023814	TRANSLATION	protein_coding	-	CCDS27887.1	1	114	0	0	1.5	44.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022993	4930415O20Rik	ENSMUST00000023728	ENSMUSP00000023728	TRANSLATION	protein_coding	-	CCDS49722.1	1	131	0	0	5.1	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000022400	Rbx1	ENSMUST00000230219	ENSMUSP00000155288	TRANSLATION	protein_coding	-	-	-	83	6	2.316	0	39.6	0	-4,-5	-	-	9.306	MINOR
ENSMUSG00000022400	Rbx1	ENSMUST00000231027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022400	Rbx1	ENSMUST00000230062	ENSMUSP00000154877	TRANSLATION	protein_coding	-	-	-	59	10	1.5	0	72	0	-4,-5	-	-	12.54	MINOR
ENSMUSG00000022400	Rbx1	ENSMUST00000023036	ENSMUSP00000023036	TRANSLATION	protein_coding	-	CCDS49676.1	1	108	12	3	19.3	88.7	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000022400	Rbx1	ENSMUST00000229991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022400	Rbx1	ENSMUST00000229880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000228475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000228820	ENSMUSP00000154133	TRANSLATION	protein_coding	stop	-	-	31	0	0	0	23.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000226533	ENSMUSP00000153731	TRANSLATION	nonsense_mediated_decay	-	-	-	101	0	1.55	0	114.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000022904	ENSMUSP00000022904	TRANSLATION	protein_coding	-	CCDS27439.1	1	382	0	7.964	16.3	552.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000227482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000226487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022295	Atp6v1c1	ENSMUST00000228486	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022464	Slc38a4	ENSMUST00000230086	ENSMUSP00000154818	TRANSLATION	protein_coding	-	CCDS27779.1	-	547	0	0	8.8	271.8	10	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022464	Slc38a4	ENSMUST00000023101	ENSMUSP00000023101	TRANSLATION	protein_coding	-	CCDS27779.1	1	547	0	0	8.8	271.8	10	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022464	Slc38a4	ENSMUST00000230907	ENSMUSP00000155372	TRANSLATION	protein_coding	stop	-	-	160	0	0	0	64.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000022464	Slc38a4	ENSMUST00000166223	ENSMUSP00000127676	TRANSLATION	protein_coding	-	CCDS27779.1	1	547	0	0	8.8	271.8	10	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022464	Slc38a4	ENSMUST00000231039	ENSMUSP00000155158	TRANSLATION	protein_coding	-	CCDS27779.1	-	547	0	0	8.8	271.8	10	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000057346	Apol9a	ENSMUST00000229175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057346	Apol9a	ENSMUST00000081776	ENSMUSP00000080468	TRANSLATION	protein_coding	-	CCDS49660.1	1	310	0	0	0.5	373.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000057346	Apol9a	ENSMUST00000089452	ENSMUSP00000086875	TRANSLATION	protein_coding	-	CCDS49660.1	1	310	0	0	0.5	373.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000057346	Apol9a	ENSMUST00000231161	ENSMUSP00000155376	TRANSLATION	protein_coding	stop	-	-	73	0	0	0	68.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022427	Tomm22	ENSMUST00000229502	ENSMUSP00000155148	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022427	Tomm22	ENSMUST00000127292	ENSMUSP00000155226	TRANSLATION	protein_coding	-	-	2	89	0	0	2	0	1	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000022427	Tomm22	ENSMUST00000023062	ENSMUSP00000023062	TRANSLATION	protein_coding	-	CCDS27646.1	1	142	0	0	1.7	0	1	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000022472	Desi1	ENSMUST00000135988	ENSMUSP00000117613	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	3.476	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022472	Desi1	ENSMUST00000089187	ENSMUSP00000086591	TRANSLATION	nonsense_mediated_decay	-	-	5	41	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022472	Desi1	ENSMUST00000129039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022472	Desi1	ENSMUST00000152227	ENSMUSP00000121504	TRANSLATION	protein_coding	-	CCDS27681.1	1	168	0	5.66	14.8	149.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022472	Desi1	ENSMUST00000023110	ENSMUSP00000023110	TRANSLATION	nonsense_mediated_decay	-	-	3	57	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022472	Desi1	ENSMUST00000146628	ENSMUSP00000114888	TRANSLATION	nonsense_mediated_decay	-	-	1	95	0	1.77	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055065	Ddx17	ENSMUST00000231053	ENSMUSP00000155365	TRANSLATION	protein_coding	-	-	-	418	21	8.95	0	224.8	0	-4,-5	-	-	14.046	MINOR
ENSMUSG00000055065	Ddx17	ENSMUST00000054014	ENSMUSP00000055535	TRANSLATION	protein_coding	-	CCDS27643.1	1	652	21	9.45	2.9	274	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000055065	Ddx17	ENSMUST00000229877	ENSMUSP00000155307	TRANSLATION	protein_coding	-	-	-	650	21	9.45	2.9	274	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000055065	Ddx17	ENSMUST00000229431	ENSMUSP00000155737	TRANSLATION	protein_coding	-	-	-	407	21	8.65	0.5	224.8	0	-4,-5	-	-	13.446	MINOR
ENSMUSG00000016552	Foxred2	ENSMUST00000129045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016552	Foxred2	ENSMUST00000016696	ENSMUSP00000016696	TRANSLATION	protein_coding	-	CCDS27607.1	1	665	28	0.68	1.5	22.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000016552	Foxred2	ENSMUST00000117725	ENSMUSP00000113403	TRANSLATION	protein_coding	-	CCDS27607.1	1	665	28	0.68	1.5	22.6	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000016552	Foxred2	ENSMUST00000140096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000001331	ENSMUSP00000001331	TRANSLATION	protein_coding	start	-	5	326	0	0	0	383.7	0	-2,0	-	-	-1	MINOR
ENSMUSG00000001285	Myg1	ENSMUST00000164961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000164019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001285	Myg1	ENSMUST00000171244	ENSMUSP00000129494	TRANSLATION	protein_coding	start/stop	-	3	306	0	0	0	248.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000001285	Myg1	ENSMUST00000168547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000113682	ENSMUSP00000109312	TRANSLATION	protein_coding	-	CCDS27879.1	1	380	0	0	1.5	468.8	0	-1,0	-	-	6	PRINCIPAL:1
ENSMUSG00000001285	Myg1	ENSMUST00000170713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000171733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000170281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001285	Myg1	ENSMUST00000170078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001656	Hoxc11	ENSMUST00000001701	ENSMUSP00000001701	TRANSLATION	protein_coding	-	CCDS27892.1	1	304	0	1	6.3	235.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000022987	Zfp641	ENSMUST00000023722	ENSMUSP00000023722	TRANSLATION	protein_coding	-	-	1	408	20	0.56	0.5	107.8	0	-4,-5	-	-	16.89	MINOR
ENSMUSG00000022987	Zfp641	ENSMUST00000169721	ENSMUSP00000133212	TRANSLATION	protein_coding	-	CCDS27789.1	1	422	20	0.56	2.7	126.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053559	Smagp	ENSMUST00000230280	ENSMUSP00000155450	TRANSLATION	protein_coding	-	-	-	46	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000053559	Smagp	ENSMUST00000229965	ENSMUSP00000155300	TRANSLATION	protein_coding	-	-	-	46	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000053559	Smagp	ENSMUST00000230517	ENSMUSP00000155534	TRANSLATION	protein_coding	-	-	-	84	0	0	1.7	0	2	-4,-7	-	-	0.241	ALTERNATIVE:2
ENSMUSG00000053559	Smagp	ENSMUST00000172334	ENSMUSP00000126870	TRANSLATION	protein_coding	-	CCDS27842.1	2	97	0	0	3.9	0	2	-4,-7	-	-	1	PRINCIPAL:2
ENSMUSG00000053559	Smagp	ENSMUST00000229307	ENSMUSP00000155782	TRANSLATION	protein_coding	-	-	-	84	0	0	1.7	0	2	-4,-7	-	-	0.241	ALTERNATIVE:2
ENSMUSG00000053559	Smagp	ENSMUST00000066068	ENSMUSP00000066137	TRANSLATION	protein_coding	-	CCDS27842.1	1	97	0	0	3.9	0	2	-4,-7	-	-	1	PRINCIPAL:2
ENSMUSG00000023046	Igfbp6	ENSMUST00000023807	ENSMUSP00000023807	TRANSLATION	protein_coding	-	CCDS27871.1	1	238	0	2.8	0.5	61.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000115388	Eppk1	ENSMUST00000226781	ENSMUSP00000154609	TRANSLATION	protein_coding	-	-	-	3458	0	0	0	1072.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039801	Cplane1	ENSMUST00000154291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039801	Cplane1	ENSMUST00000128772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039801	Cplane1	ENSMUST00000130748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039801	Cplane1	ENSMUST00000228039	ENSMUSP00000154760	TRANSLATION	protein_coding	start/stop	-	-	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039801	Cplane1	ENSMUST00000110617	ENSMUSP00000106247	TRANSLATION	protein_coding	-	CCDS49578.1	5	3214	0	0	0.5	437	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039801	Cplane1	ENSMUST00000150869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037627	Rgs22	ENSMUST00000172831	ENSMUSP00000134259	TRANSLATION	protein_coding	-	CCDS56979.1	5	1258	0	1.38	0.5	66.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037627	Rgs22	ENSMUST00000173018	ENSMUSP00000133703	TRANSLATION	protein_coding	start	-	5	219	0	1.38	0	29.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037627	Rgs22	ENSMUST00000172737	ENSMUSP00000133508	TRANSLATION	protein_coding	start/stop	-	5	262	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037627	Rgs22	ENSMUST00000164955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022206	Npr3	ENSMUST00000226878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022206	Npr3	ENSMUST00000066529	ENSMUSP00000066737	TRANSLATION	protein_coding	-	CCDS27386.1	1	536	0	6.36	2.7	175.9	1	1,-4	-	-	11.82	PRINCIPAL:2
ENSMUSG00000022206	Npr3	ENSMUST00000226139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022206	Npr3	ENSMUST00000228603	ENSMUSP00000154180	TRANSLATION	protein_coding	-	-	-	535	0	6.45	2.7	175.9	1	1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000022206	Npr3	ENSMUST00000228489	ENSMUSP00000153895	TRANSLATION	protein_coding	-	-	-	281	0	5.45	1.7	84.2	1	-4,-7	-	-	4.5	MINOR
ENSMUSG00000043144	Aqp6	ENSMUST00000230075	ENSMUSP00000154934	TRANSLATION	protein_coding	-	-	-	276	0	3.35	1	220.2	5	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000043144	Aqp6	ENSMUST00000023754	ENSMUSP00000023754	TRANSLATION	protein_coding	-	CCDS27824.1	1	293	0	3.35	0.5	220.2	5	-3,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000038760	Trhr	ENSMUST00000038856	ENSMUSP00000036320	TRANSLATION	protein_coding	-	CCDS37068.1	1	393	0	2.14	2.5	164.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038760	Trhr	ENSMUST00000227505	ENSMUSP00000154140	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0.6	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000038760	Trhr	ENSMUST00000110289	ENSMUSP00000105918	TRANSLATION	protein_coding	-	CCDS37068.1	2	393	0	2.14	2.5	164.9	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038760	Trhr	ENSMUST00000226626	ENSMUSP00000154650	TRANSLATION	nonsense_mediated_decay	-	-	-	393	0	2.14	2.5	164.9	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000044726	Erich5	ENSMUST00000060894	ENSMUSP00000058182	TRANSLATION	protein_coding	-	CCDS27417.1	1	362	0	0	0.5	189.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000068099	1500009C09Rik	ENSMUST00000143238	ENSMUSP00000120070	TRANSLATION	protein_coding	-	-	1	68	0	0	0	0	1	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000068099	1500009C09Rik	ENSMUST00000136948	ENSMUSP00000115748	TRANSLATION	protein_coding	-	-	3	68	0	0	0	0	1	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022304	Dpys	ENSMUST00000110306	ENSMUSP00000105935	TRANSLATION	protein_coding	-	CCDS27445.1	1	519	7	9.33	6.3	130.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022304	Dpys	ENSMUST00000022915	ENSMUSP00000022915	TRANSLATION	protein_coding	-	CCDS27445.1	1	519	7	9.33	6.3	130.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022304	Dpys	ENSMUST00000155859	ENSMUSP00000114708	TRANSLATION	protein_coding	start	-	5	47	0	1.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022304	Dpys	ENSMUST00000150196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022445	Cyp2d26	ENSMUST00000229512	ENSMUSP00000155850	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	1.68	0	42.1	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000022445	Cyp2d26	ENSMUST00000006094	ENSMUSP00000006094	TRANSLATION	protein_coding	-	CCDS37163.1	1	500	33	9.51	1.5	463.1	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022445	Cyp2d26	ENSMUST00000230125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022445	Cyp2d26	ENSMUST00000229387	ENSMUSP00000155717	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	0.6	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000036606	Plxnb2	ENSMUST00000151418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036606	Plxnb2	ENSMUST00000060808	ENSMUSP00000051731	TRANSLATION	protein_coding	-	CCDS49698.1	5	1842	0	24.23	1.5	1101.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036606	Plxnb2	ENSMUST00000143014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036606	Plxnb2	ENSMUST00000139372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036606	Plxnb2	ENSMUST00000131062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036606	Plxnb2	ENSMUST00000230393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036606	Plxnb2	ENSMUST00000229966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036606	Plxnb2	ENSMUST00000109331	ENSMUSP00000104955	TRANSLATION	protein_coding	-	CCDS49698.1	5	1842	0	24.23	1.5	1101.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044361	BC024139	ENSMUST00000089654	ENSMUSP00000087082	TRANSLATION	protein_coding	-	-	1	737	0	0	0	37	0	-4,-2	-	-	5.874	ALTERNATIVE:2
ENSMUSG00000044361	BC024139	ENSMUST00000226663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044361	BC024139	ENSMUST00000146157	ENSMUSP00000117783	TRANSLATION	nonsense_mediated_decay	-	-	1	597	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044361	BC024139	ENSMUST00000054022	ENSMUSP00000053305	TRANSLATION	protein_coding	-	CCDS49643.1	1	772	0	0	0.5	37.8	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000044361	BC024139	ENSMUST00000126892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068246	Apol9b	ENSMUST00000230742	ENSMUSP00000154979	TRANSLATION	protein_coding	stop	-	-	180	0	0	0	231	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068246	Apol9b	ENSMUST00000109775	ENSMUSP00000105397	TRANSLATION	protein_coding	-	CCDS27604.1	1	310	0	0	0.5	375	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068246	Apol9b	ENSMUST00000230377	ENSMUSP00000155167	TRANSLATION	protein_coding	stop	-	-	126	0	0	0	171.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068246	Apol9b	ENSMUST00000230979	ENSMUSP00000155314	TRANSLATION	protein_coding	-	CCDS27604.1	-	310	0	0	0.5	375	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000047394	Odf3b	ENSMUST00000228111	ENSMUSP00000154008	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047394	Odf3b	ENSMUST00000238996	ENSMUSP00000159125	TRANSLATION	protein_coding	-	-	-	254	0	0	2.7	74.2	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000047394	Odf3b	ENSMUST00000049968	ENSMUSP00000053112	TRANSLATION	protein_coding	-	CCDS27748.1	1	238	0	0	1.5	66.5	0	-4,-2	-	-	5.376	PRINCIPAL:2
ENSMUSG00000047394	Odf3b	ENSMUST00000226267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047394	Odf3b	ENSMUST00000228005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047394	Odf3b	ENSMUST00000227854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047394	Odf3b	ENSMUST00000227203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047394	Odf3b	ENSMUST00000227834	ENSMUSP00000154266	TRANSLATION	protein_coding	-	-	-	163	0	0	0	53.9	0	-4,-2	-	-	4.356	MINOR
ENSMUSG00000071714	Csf2rb2	ENSMUST00000230115	ENSMUSP00000155013	TRANSLATION	protein_coding	-	-	-	769	0	8.45	0.5	53	1	4,-1	-	-	7.998	MINOR
ENSMUSG00000071714	Csf2rb2	ENSMUST00000096356	ENSMUSP00000094083	TRANSLATION	protein_coding	-	CCDS27611.1	1	878	0	10.45	0.5	53	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071714	Csf2rb2	ENSMUST00000230753	ENSMUSP00000155336	TRANSLATION	nonsense_mediated_decay	start	-	-	23	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071714	Csf2rb2	ENSMUST00000230932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036925	Mucl2	ENSMUST00000226584	ENSMUSP00000154772	TRANSLATION	protein_coding	-	-	-	146	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000036925	Mucl2	ENSMUST00000037685	ENSMUSP00000044814	TRANSLATION	protein_coding	-	CCDS57015.1	1	138	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000022623	Shank3	ENSMUST00000167173	ENSMUSP00000132229	TRANSLATION	protein_coding	stop	-	5	135	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022623	Shank3	ENSMUST00000109309	ENSMUSP00000104932	TRANSLATION	protein_coding	-	CCDS27754.1	1	1730	3	14.24	0.5	230.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022623	Shank3	ENSMUST00000230807	ENSMUSP00000155608	TRANSLATION	protein_coding	-	-	-	382	0	4.78	0	73.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022623	Shank3	ENSMUST00000039074	ENSMUSP00000048062	TRANSLATION	protein_coding	start	-	1	768	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022623	Shank3	ENSMUST00000066545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022623	Shank3	ENSMUST00000238458	ENSMUSP00000158668	TRANSLATION	protein_coding	-	-	-	211	3	0.8	0	76.6	0	3,2	-	-	3	MINOR
ENSMUSG00000022623	Shank3	ENSMUST00000154240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022623	Shank3	ENSMUST00000123799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022623	Shank3	ENSMUST00000135214	ENSMUSP00000159275	TRANSLATION	protein_coding	stop	-	3	70	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022623	Shank3	ENSMUST00000229559	ENSMUSP00000154842	TRANSLATION	nonsense_mediated_decay	-	-	-	307	0	4.78	0	73.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000060036	Rpl3	ENSMUST00000185306	ENSMUSP00000140228	TRANSLATION	protein_coding	stop	-	5	188	0	3	0	287.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000060036	Rpl3	ENSMUST00000230985	ENSMUSP00000155250	TRANSLATION	protein_coding	start	-	-	134	0	3.03	0	162	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060036	Rpl3	ENSMUST00000187832	ENSMUSP00000139467	TRANSLATION	nonsense_mediated_decay	-	-	5	180	0	2.14	0	214.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000060036	Rpl3	ENSMUST00000188025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060036	Rpl3	ENSMUST00000081650	ENSMUSP00000080354	TRANSLATION	protein_coding	-	CCDS37144.1	1	403	0	9.08	21.5	641.1	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000060036	Rpl3	ENSMUST00000185928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060036	Rpl3	ENSMUST00000187578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041935	AW549877	ENSMUST00000228421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041935	AW549877	ENSMUST00000046633	ENSMUSP00000038476	TRANSLATION	protein_coding	-	CCDS27360.1	1	294	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000101892	9130401M01Rik	ENSMUST00000100655	ENSMUSP00000098220	TRANSLATION	protein_coding	-	CCDS37078.1	1	372	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000101892	9130401M01Rik	ENSMUST00000189159	ENSMUSP00000141147	TRANSLATION	nonsense_mediated_decay	start	-	3	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000101892	9130401M01Rik	ENSMUST00000185553	ENSMUSP00000140805	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000101892	9130401M01Rik	ENSMUST00000187062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022269	Marchf11	ENSMUST00000152841	ENSMUSP00000120622	TRANSLATION	protein_coding	-	CCDS79365.1	1	255	8	0.8	1.5	47.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022269	Marchf11	ENSMUST00000155819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022269	Marchf11	ENSMUST00000126304	ENSMUSP00000153852	TRANSLATION	protein_coding	-	-	1	252	8	0.8	0	47.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022269	Marchf11	ENSMUST00000140840	ENSMUSP00000118729	TRANSLATION	protein_coding	-	CCDS27401.2	2	400	8	0.8	1.5	47.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000023051	Tarbp2	ENSMUST00000154948	ENSMUSP00000154902	TRANSLATION	nonsense_mediated_decay	start	-	3	111	0	2.08	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000229805	ENSMUSP00000155826	TRANSLATION	protein_coding	stop	-	-	42	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000141266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023051	Tarbp2	ENSMUST00000153171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023051	Tarbp2	ENSMUST00000142194	ENSMUSP00000123339	TRANSLATION	protein_coding	stop	-	3	243	0	5.26	0	113.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000146756	ENSMUSP00000121748	TRANSLATION	protein_coding	stop	-	3	225	0	5.26	0	113.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000136968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023051	Tarbp2	ENSMUST00000131184	ENSMUSP00000117964	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	1	0	27.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000150393	ENSMUSP00000120315	TRANSLATION	protein_coding	stop	-	5	89	0	2.01	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000154451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023051	Tarbp2	ENSMUST00000149200	ENSMUSP00000123213	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	1	0	27.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000100168	ENSMUSP00000097744	TRANSLATION	protein_coding	-	CCDS57013.1	1	274	0	5.18	1.5	56.8	0	-4,-5	-	-	4.64	MINOR
ENSMUSG00000023051	Tarbp2	ENSMUST00000023813	ENSMUSP00000023813	TRANSLATION	protein_coding	-	CCDS27886.1	1	365	0	7.26	6.3	113.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023051	Tarbp2	ENSMUST00000134033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034634	Ly6d	ENSMUST00000040404	ENSMUSP00000047419	TRANSLATION	protein_coding	-	CCDS27531.1	1	127	0	0	1.5	35.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000033047	Eif3l	ENSMUST00000040518	ENSMUSP00000038839	TRANSLATION	protein_coding	-	CCDS27632.1	1	564	0	11.08	11.8	587	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033047	Eif3l	ENSMUST00000229310	ENSMUSP00000154872	TRANSLATION	protein_coding	stop	-	-	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033047	Eif3l	ENSMUST00000230032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033047	Eif3l	ENSMUST00000229338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046034	Otulin	ENSMUST00000059662	ENSMUSP00000057893	TRANSLATION	protein_coding	-	CCDS49586.1	1	352	0	5.83	6.3	416.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000046034	Otulin	ENSMUST00000228179	ENSMUSP00000154705	TRANSLATION	protein_coding	start	-	-	154	0	1	0	130	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046034	Otulin	ENSMUST00000228439	ENSMUSP00000154117	TRANSLATION	nonsense_mediated_decay	-	-	-	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000008690	Ncaph2	ENSMUST00000074552	ENSMUSP00000074139	TRANSLATION	protein_coding	-	CCDS49700.1	1	607	0	0	0.5	518.3	0	-4,-5	-	-	5.856	PRINCIPAL:3
ENSMUSG00000008690	Ncaph2	ENSMUST00000151523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000036987	ENSMUSP00000036900	TRANSLATION	protein_coding	-	CCDS70660.1	1	576	0	0	0.5	467.1	0	-4,-5	-	-	2.784	MINOR
ENSMUSG00000008690	Ncaph2	ENSMUST00000147207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000134900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000145259	ENSMUSP00000122118	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008690	Ncaph2	ENSMUST00000140665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000145793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000136638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000088717	ENSMUSP00000086095	TRANSLATION	protein_coding	-	CCDS70661.1	1	608	0	0	0.5	520.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000008690	Ncaph2	ENSMUST00000147733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000123889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008690	Ncaph2	ENSMUST00000141643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045996	Polr2k	ENSMUST00000180159	ENSMUSP00000136975	TRANSLATION	protein_coding	-	CCDS56980.1	1	58	5	2.08	21.5	62.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000045996	Polr2k	ENSMUST00000057177	ENSMUSP00000051968	TRANSLATION	protein_coding	-	CCDS27426.1	1	99	5	2.08	0.5	62.2	0	-4,-5	-	-	17	MINOR
ENSMUSG00000022235	Cmbl	ENSMUST00000161088	ENSMUSP00000125020	TRANSLATION	protein_coding	stop	-	2	118	0	1.36	0	42.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022235	Cmbl	ENSMUST00000162532	ENSMUSP00000125296	TRANSLATION	protein_coding	stop	-	5	174	1	3.024	0	70.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022235	Cmbl	ENSMUST00000070918	ENSMUSP00000070314	TRANSLATION	protein_coding	-	CCDS27410.1	1	245	2	4.144	8.8	135.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022235	Cmbl	ENSMUST00000226951	ENSMUSP00000153812	TRANSLATION	protein_coding	stop	-	-	215	2	3.784	0	123.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055737	Ghr	ENSMUST00000161561	ENSMUSP00000124064	TRANSLATION	protein_coding	-	CCDS27358.1	1	650	0	5.7896	0.5	474.9	1	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055737	Ghr	ENSMUST00000161770	ENSMUSP00000125044	TRANSLATION	protein_coding	stop	-	3	183	0	3.7896	0	41.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000055737	Ghr	ENSMUST00000159508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055737	Ghr	ENSMUST00000161180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055737	Ghr	ENSMUST00000110697	ENSMUSP00000106325	TRANSLATION	protein_coding	-	CCDS37024.1	5	297	0	5.7896	0.5	41.6	0	1,-2	-	-	6	MINOR
ENSMUSG00000055737	Ghr	ENSMUST00000160343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055737	Ghr	ENSMUST00000159912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055737	Ghr	ENSMUST00000162993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055737	Ghr	ENSMUST00000069451	ENSMUSP00000069457	TRANSLATION	protein_coding	-	CCDS27358.1	1	650	0	5.7896	0.5	474.9	1	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000055737	Ghr	ENSMUST00000110698	ENSMUSP00000106326	TRANSLATION	protein_coding	-	CCDS37024.1	1	297	0	5.7896	0.5	41.6	0	1,-2	-	-	6	MINOR
ENSMUSG00000005124	Ccn4	ENSMUST00000005255	ENSMUSP00000005255	TRANSLATION	protein_coding	-	CCDS27510.1	1	367	0	0	1.5	133.7	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000005124	Ccn4	ENSMUST00000230535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005124	Ccn4	ENSMUST00000147079	ENSMUSP00000117402	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000005124	Ccn4	ENSMUST00000229246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005124	Ccn4	ENSMUST00000118823	ENSMUSP00000113144	TRANSLATION	protein_coding	-	-	5	153	0	0	0	41	0	2,-2	-	-	0.438	MINOR
ENSMUSG00000005124	Ccn4	ENSMUST00000133863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016554	Eif3d	ENSMUST00000230419	ENSMUSP00000155152	TRANSLATION	protein_coding	stop	-	-	169	0	0	0	119.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016554	Eif3d	ENSMUST00000229737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016554	Eif3d	ENSMUST00000229413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016554	Eif3d	ENSMUST00000100484	ENSMUSP00000098053	TRANSLATION	protein_coding	-	CCDS37130.1	1	548	0	7.85	7.5	723.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000016554	Eif3d	ENSMUST00000229713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016554	Eif3d	ENSMUST00000229784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016554	Eif3d	ENSMUST00000230711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016554	Eif3d	ENSMUST00000229824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045763	Basp1	ENSMUST00000058845	ENSMUSP00000053943	TRANSLATION	protein_coding	-	CCDS27398.1	1	226	2	0	0.5	234.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000045763	Basp1	ENSMUST00000228597	ENSMUSP00000154675	TRANSLATION	protein_coding	stop	-	-	17	2	0	0	28.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014313	Cox6c	ENSMUST00000127999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014313	Cox6c	ENSMUST00000153512	ENSMUSP00000123609	TRANSLATION	protein_coding	-	CCDS27424.1	2	76	0	2.08	9	132.7	1	-2,1	-	-	15	PRINCIPAL:1
ENSMUSG00000014313	Cox6c	ENSMUST00000155638	ENSMUSP00000121106	TRANSLATION	nonsense_mediated_decay	start	-	3	10	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014313	Cox6c	ENSMUST00000014457	ENSMUSP00000014457	TRANSLATION	protein_coding	-	CCDS27424.1	1	76	0	2.08	9	132.7	1	-2,1	-	-	15	PRINCIPAL:1
ENSMUSG00000014313	Cox6c	ENSMUST00000227231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014313	Cox6c	ENSMUST00000156915	ENSMUSP00000122391	TRANSLATION	protein_coding	-	CCDS27424.1	5	76	0	2.08	9	132.7	1	-2,1	-	-	15	PRINCIPAL:1
ENSMUSG00000022434	Fam118a	ENSMUST00000023069	ENSMUSP00000023069	TRANSLATION	protein_coding	-	CCDS27717.1	1	357	0	0	7.5	60.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022434	Fam118a	ENSMUST00000229629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022434	Fam118a	ENSMUST00000229203	ENSMUSP00000154985	TRANSLATION	protein_coding	-	CCDS27717.1	-	357	0	0	7.5	60.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022434	Fam118a	ENSMUST00000230382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022434	Fam118a	ENSMUST00000229153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022434	Fam118a	ENSMUST00000229691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022434	Fam118a	ENSMUST00000230213	ENSMUSP00000155344	TRANSLATION	protein_coding	stop	-	-	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037106	Fer1l6	ENSMUST00000159705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037106	Fer1l6	ENSMUST00000161028	ENSMUSP00000125718	TRANSLATION	protein_coding	-	-	5	1862	8	3.64	0.5	523.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000037106	Fer1l6	ENSMUST00000159177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022361	Zhx1	ENSMUST00000070143	ENSMUSP00000066201	TRANSLATION	protein_coding	-	CCDS27488.1	1	873	9	1	5.1	153	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022361	Zhx1	ENSMUST00000176713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022361	Zhx1	ENSMUST00000175805	ENSMUSP00000134844	TRANSLATION	protein_coding	-	CCDS27488.1	5	873	9	1	5.1	153	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022361	Zhx1	ENSMUST00000176270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022361	Zhx1	ENSMUST00000110168	ENSMUSP00000105797	TRANSLATION	protein_coding	-	CCDS27488.1	5	873	9	1	5.1	153	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000022361	Zhx1	ENSMUST00000177276	ENSMUSP00000135230	TRANSLATION	protein_coding	stop	-	1	623	9	0.4	0	79.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022561	Gpaa1	ENSMUST00000163798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000169378	ENSMUSP00000128507	TRANSLATION	protein_coding	stop	-	2	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022561	Gpaa1	ENSMUST00000168948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022561	Gpaa1	ENSMUST00000230818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000172281	ENSMUSP00000132986	TRANSLATION	protein_coding	-	-	5	561	0	0	0	524.1	5	-4,0	-	-	6	MINOR
ENSMUSG00000022561	Gpaa1	ENSMUST00000165179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000171005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000170121	ENSMUSP00000133173	TRANSLATION	nonsense_mediated_decay	start	-	3	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022561	Gpaa1	ENSMUST00000230683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000164972	ENSMUSP00000127108	TRANSLATION	nonsense_mediated_decay	-	-	1	74	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022561	Gpaa1	ENSMUST00000164680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022561	Gpaa1	ENSMUST00000023221	ENSMUSP00000023221	TRANSLATION	protein_coding	-	CCDS37120.1	1	621	0	0	6.3	524.1	6	-3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000022283	Pabpc1	ENSMUST00000155116	ENSMUSP00000117063	TRANSLATION	protein_coding	start	-	3	118	0	3.25	0	113.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022283	Pabpc1	ENSMUST00000226496	ENSMUSP00000154430	TRANSLATION	protein_coding	stop	-	-	126	0	2	2	75.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022283	Pabpc1	ENSMUST00000226830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022283	Pabpc1	ENSMUST00000142357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022283	Pabpc1	ENSMUST00000156793	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022283	Pabpc1	ENSMUST00000146327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022283	Pabpc1	ENSMUST00000001809	ENSMUSP00000001809	TRANSLATION	protein_coding	-	CCDS27431.1	1	636	0	11.85	17	416.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022283	Pabpc1	ENSMUST00000226867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022283	Pabpc1	ENSMUST00000147116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022283	Pabpc1	ENSMUST00000146577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054196	Cthrc1	ENSMUST00000067072	ENSMUSP00000070018	TRANSLATION	protein_coding	-	CCDS27442.1	1	245	0	0	6.3	29.4	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000054196	Cthrc1	ENSMUST00000144800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054196	Cthrc1	ENSMUST00000226433	ENSMUSP00000153886	TRANSLATION	protein_coding	-	-	-	171	0	0	0.5	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000054196	Cthrc1	ENSMUST00000132192	ENSMUSP00000154739	TRANSLATION	protein_coding	start	-	3	102	0	0	0	29.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022491	Glycam1	ENSMUST00000228060	ENSMUSP00000154735	TRANSLATION	protein_coding	-	-	-	149	0	0	0.5	186.6	0	4,-1	-	-	5.412	ALTERNATIVE:2
ENSMUSG00000022491	Glycam1	ENSMUST00000228895	ENSMUSP00000153908	TRANSLATION	protein_coding	-	-	-	128	0	0	0.5	136.2	0	4,-1	-	-	2.388	MINOR
ENSMUSG00000022491	Glycam1	ENSMUST00000226679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022491	Glycam1	ENSMUST00000023134	ENSMUSP00000023134	TRANSLATION	protein_coding	-	CCDS27905.1	1	151	0	0	0.5	196.4	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000033356	Pus7l	ENSMUST00000134061	ENSMUSP00000120207	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033356	Pus7l	ENSMUST00000147832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033356	Pus7l	ENSMUST00000049151	ENSMUSP00000044075	TRANSLATION	protein_coding	-	CCDS27771.1	1	702	0	4.075	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050463	Krt78	ENSMUST00000164932	ENSMUSP00000126197	TRANSLATION	protein_coding	-	CCDS49736.1	1	1068	0	4.23	0.5	341.1	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000096607	7530416G11Rik	ENSMUST00000178942	ENSMUSP00000136090	TRANSLATION	protein_coding	-	CCDS56996.1	1	159	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000039007	Cpq	ENSMUST00000226814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039007	Cpq	ENSMUST00000228916	ENSMUSP00000154400	TRANSLATION	protein_coding	-	CCDS27414.1	-	470	6	5.78	6.3	92.9	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000039007	Cpq	ENSMUST00000227018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039007	Cpq	ENSMUST00000228737	ENSMUSP00000154802	TRANSLATION	protein_coding	stop	-	-	198	0	1.48	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039007	Cpq	ENSMUST00000226483	ENSMUSP00000153768	TRANSLATION	protein_coding	stop	-	-	115	0	0.4	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000039007	Cpq	ENSMUST00000042167	ENSMUSP00000039046	TRANSLATION	protein_coding	-	CCDS27414.1	1	470	6	5.78	6.3	92.9	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000039007	Cpq	ENSMUST00000226896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016028	Celsr1	ENSMUST00000227450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016028	Celsr1	ENSMUST00000239489	ENSMUSP00000159353	TRANSLATION	protein_coding	start	-	-	201	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016028	Celsr1	ENSMUST00000016172	ENSMUSP00000016172	TRANSLATION	protein_coding	-	CCDS37172.1	1	3034	90	13.085	0.5	1274.8	8	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000016028	Celsr1	ENSMUST00000239396	ENSMUSP00000159344	TRANSLATION	protein_coding	start	-	-	133	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000016028	Celsr1	ENSMUST00000226840	ENSMUSP00000153927	TRANSLATION	protein_coding	start	-	-	1672	11	12.885	0	736.6	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000016028	Celsr1	ENSMUST00000226204	ENSMUSP00000154168	TRANSLATION	protein_coding	start/stop	-	-	279	0	0.6	0	0	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000037386	Rims2	ENSMUST00000082054	ENSMUSP00000080711	TRANSLATION	protein_coding	-	CCDS37067.1	2	1530	8	12.5	5.1	167.2	0	-4,-2	-	-	18.678	PRINCIPAL:3
ENSMUSG00000037386	Rims2	ENSMUST00000226410	ENSMUSP00000153868	TRANSLATION	protein_coding	-	-	-	285	0	4	8.4	58.8	0	-4,-1	-	-	3	MINOR
ENSMUSG00000037386	Rims2	ENSMUST00000228867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037386	Rims2	ENSMUST00000042917	ENSMUSP00000048719	TRANSLATION	protein_coding	-	CCDS56982.1	1	1572	8	12.5	5.1	183.6	0	-4,-2	-	-	19.662	ALTERNATIVE:1
ENSMUSG00000037386	Rims2	ENSMUST00000228269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037386	Rims2	ENSMUST00000227381	ENSMUSP00000154531	TRANSLATION	protein_coding	start	-	-	1297	0	10.82	0	128.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037386	Rims2	ENSMUST00000227469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037386	Rims2	ENSMUST00000227243	ENSMUSP00000154153	TRANSLATION	protein_coding	-	-	-	1550	8	12.5	5.1	183.6	0	-4,-2	-	-	19.662	ALTERNATIVE:1
ENSMUSG00000037386	Rims2	ENSMUST00000226243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037386	Rims2	ENSMUST00000227830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037386	Rims2	ENSMUST00000228839	ENSMUSP00000154645	TRANSLATION	protein_coding	stop	-	-	352	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037386	Rims2	ENSMUST00000228460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068086	Cyp2d9	ENSMUST00000229473	ENSMUSP00000154879	TRANSLATION	nonsense_mediated_decay	start	-	-	53	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000229313	ENSMUSP00000155000	TRANSLATION	protein_coding	stop	-	-	158	2	3.65	0	57.9	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000230024	ENSMUSP00000155373	TRANSLATION	protein_coding	start	-	-	206	13	3.73	0	170.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000230000	ENSMUSP00000155410	TRANSLATION	protein_coding	start/stop	-	-	208	8	4.65	0	145.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000229181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068086	Cyp2d9	ENSMUST00000231136	ENSMUSP00000155611	TRANSLATION	protein_coding	stop	-	-	254	5	5.05	0	105	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000089129	ENSMUSP00000086530	TRANSLATION	protein_coding	-	CCDS27691.1	1	504	30	10.96	1.5	471.2	2	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068086	Cyp2d9	ENSMUST00000230191	ENSMUSP00000155496	TRANSLATION	nonsense_mediated_decay	-	-	-	294	6	6.314	0	172.4	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000068086	Cyp2d9	ENSMUST00000229793	ENSMUSP00000155726	TRANSLATION	protein_coding	stop	-	-	103	2	2.98	0	38.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022323	Rida	ENSMUST00000125286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022323	Rida	ENSMUST00000022946	ENSMUSP00000022946	TRANSLATION	protein_coding	-	CCDS27418.1	1	135	8	4	13.3	148.7	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000022323	Rida	ENSMUST00000129426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022323	Rida	ENSMUST00000141154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000072838	ENSMUSP00000072617	TRANSLATION	protein_coding	-	CCDS27572.1	1	503	0	3	1.5	326.5	0	-4,-6	-	-	5.794	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000226872	ENSMUSP00000154328	TRANSLATION	protein_coding	-	-	-	477	0	3	0	327.3	0	-4,-6	-	-	5.55	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000228688	ENSMUSP00000154799	TRANSLATION	protein_coding	start	-	-	78	0	0	0	114.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000228720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000226860	ENSMUSP00000154526	TRANSLATION	nonsense_mediated_decay	-	-	-	107	0	2.4098	0	72.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000228757	ENSMUSP00000154356	TRANSLATION	nonsense_mediated_decay	-	-	-	142	0	3	0	117.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000228781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000227921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000230505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000228371	ENSMUSP00000154638	TRANSLATION	protein_coding	-	-	-	531	0	3	1.5	327.3	0	-4,-6	-	-	5.794	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000230069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022556	Hsf1	ENSMUST00000229363	ENSMUSP00000155104	TRANSLATION	protein_coding	-	-	-	438	0	3	0	326.5	0	-4,-6	-	-	5.55	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000227478	ENSMUSP00000154602	TRANSLATION	protein_coding	-	-	-	525	0	3	5.1	515	0	-4,-6	-	-	13.55	PRINCIPAL:1
ENSMUSG00000022556	Hsf1	ENSMUST00000228388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022556	Hsf1	ENSMUST00000226238	ENSMUSP00000154386	TRANSLATION	protein_coding	start/stop	-	-	218	0	0	0	295.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022556	Hsf1	ENSMUST00000228868	ENSMUSP00000154346	TRANSLATION	nonsense_mediated_decay	-	-	-	172	0	3.225	0	117.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042351	Grap2	ENSMUST00000230910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042351	Grap2	ENSMUST00000043149	ENSMUSP00000046532	TRANSLATION	protein_coding	-	CCDS27663.1	1	322	0	4.45	1.5	178	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042351	Grap2	ENSMUST00000229980	ENSMUSP00000155681	TRANSLATION	protein_coding	-	CCDS27663.1	-	322	0	4.45	1.5	178	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042351	Grap2	ENSMUST00000230856	ENSMUSP00000154860	TRANSLATION	nonsense_mediated_decay	-	-	-	85	0	0.91	0	27	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042351	Grap2	ENSMUST00000230573	ENSMUSP00000155135	TRANSLATION	nonsense_mediated_decay	-	-	-	53	0	0.93	0	26.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022422	Dscc1	ENSMUST00000143523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022422	Dscc1	ENSMUST00000110231	ENSMUSP00000105860	TRANSLATION	protein_coding	-	-	1	462	0	3.24	0	314	0	-4,-7	-	-	11.094	MINOR
ENSMUSG00000022422	Dscc1	ENSMUST00000023059	ENSMUSP00000023059	TRANSLATION	protein_coding	-	CCDS27473.1	1	399	0	3.24	1.5	329.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022610	Mapk12	ENSMUST00000088827	ENSMUSP00000086207	TRANSLATION	protein_coding	-	CCDS27740.1	1	367	20	9.58	7.5	236.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022610	Mapk12	ENSMUST00000230509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022610	Mapk12	ENSMUST00000231056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022610	Mapk12	ENSMUST00000229193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022610	Mapk12	ENSMUST00000230266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022610	Mapk12	ENSMUST00000231014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022610	Mapk12	ENSMUST00000230352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022325	Pop1	ENSMUST00000132427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022325	Pop1	ENSMUST00000155073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022325	Pop1	ENSMUST00000153061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022325	Pop1	ENSMUST00000052290	ENSMUSP00000052654	TRANSLATION	protein_coding	-	CCDS27420.1	1	1045	0	0	1.5	96	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000022325	Pop1	ENSMUST00000079028	ENSMUSP00000078037	TRANSLATION	protein_coding	-	CCDS27419.1	1	1015	0	0	1.5	96	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000022325	Pop1	ENSMUST00000126223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000086361	Gm6569	ENSMUST00000154520	ENSMUSP00000121081	TRANSLATION	protein_coding	-	-	3	175	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000099083	Atf7	ENSMUST00000184918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099083	Atf7	ENSMUST00000185070	ENSMUSP00000139379	TRANSLATION	protein_coding	stop	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000183452	ENSMUSP00000139367	TRANSLATION	nonsense_mediated_decay	-	-	5	54	3	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000184906	ENSMUSP00000139243	TRANSLATION	protein_coding	-	CCDS84197.1	1	424	3	3.5	0.5	47	0	-4,-5	-	-	15	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000183727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000099083	Atf7	ENSMUST00000184485	ENSMUSP00000139308	TRANSLATION	protein_coding	-	CCDS84198.1	1	483	3	3.5	9.5	47	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000099083	Atf7	ENSMUST00000183765	ENSMUSP00000139054	TRANSLATION	protein_coding	stop	-	5	202	3	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000108828	ENSMUSP00000104456	TRANSLATION	protein_coding	-	-	1	413	3	3.5	0	47	0	-4,-5	-	-	15	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000096143	ENSMUSP00000093857	TRANSLATION	protein_coding	-	-	-	129	0	0	0	0	0	-2,-5	-	-	0	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000184616	ENSMUSP00000139181	TRANSLATION	protein_coding	-	CCDS84198.1	1	483	3	3.5	9.5	47	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000099083	Atf7	ENSMUST00000169033	ENSMUSP00000130130	TRANSLATION	protein_coding	-	-	1	413	3	3.5	0	47	0	-4,-5	-	-	15	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000184077	ENSMUSP00000139217	TRANSLATION	protein_coding	stop	-	5	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000099083	Atf7	ENSMUST00000183786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096210	H1f0	ENSMUST00000180086	ENSMUSP00000137309	TRANSLATION	protein_coding	-	CCDS56990.1	-	194	0	0.8	0.5	96.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022299	Slc25a32	ENSMUST00000022908	ENSMUSP00000022908	TRANSLATION	protein_coding	-	CCDS27443.1	1	316	5	4.61	2.7	231.3	0	-4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000022299	Slc25a32	ENSMUST00000228160	ENSMUSP00000154220	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	1.4	0	70.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022299	Slc25a32	ENSMUST00000226144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022299	Slc25a32	ENSMUST00000227323	ENSMUSP00000154227	TRANSLATION	protein_coding	stop	-	-	269	1	3.91	0	174.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033228	Scaf11	ENSMUST00000227069	ENSMUSP00000154321	TRANSLATION	nonsense_mediated_decay	-	-	-	1389	7	1.1	0	24.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033228	Scaf11	ENSMUST00000047835	ENSMUSP00000044898	TRANSLATION	protein_coding	-	CCDS37186.1	5	1456	7	1.1	0.5	24.4	0	-4,-5	-	-	14.952	PRINCIPAL:1
ENSMUSG00000033228	Scaf11	ENSMUST00000228260	ENSMUSP00000154059	TRANSLATION	nonsense_mediated_decay	start	-	-	84	7	0.8	0	24.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033228	Scaf11	ENSMUST00000227133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033228	Scaf11	ENSMUST00000228535	ENSMUSP00000154368	TRANSLATION	protein_coding	start/stop	-	-	232	6	0.8	0	49.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033228	Scaf11	ENSMUST00000228072	ENSMUSP00000154674	TRANSLATION	protein_coding	start	-	-	476	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023026	Dip2b	ENSMUST00000100203	ENSMUSP00000097777	TRANSLATION	protein_coding	-	CCDS49731.1	1	1574	0	15.555	7.5	440.1	0	-3,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000023026	Dip2b	ENSMUST00000135658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023026	Dip2b	ENSMUST00000230619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023026	Dip2b	ENSMUST00000230733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023026	Dip2b	ENSMUST00000023768	ENSMUSP00000023768	TRANSLATION	protein_coding	-	CCDS27831.1	5	1340	0	15.555	0.5	311.1	0	-4,-5	-	-	6	MINOR
ENSMUSG00000045281	Gpr20	ENSMUST00000064166	ENSMUSP00000063910	TRANSLATION	protein_coding	-	CCDS27518.1	1	358	0	0.42	1.5	107	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022629	Kif21a	ENSMUST00000109287	ENSMUSP00000104910	TRANSLATION	protein_coding	-	CCDS49706.1	1	1567	11	10.12	1.5	445.8	0	-4,-6	-	-	17.872	MINOR
ENSMUSG00000022629	Kif21a	ENSMUST00000109288	ENSMUSP00000104911	TRANSLATION	protein_coding	-	CCDS37179.1	1	1573	11	10.12	1.5	445.8	0	-4,-6	-	-	17.872	MINOR
ENSMUSG00000022629	Kif21a	ENSMUST00000088614	ENSMUSP00000085985	TRANSLATION	protein_coding	-	CCDS49708.1	5	1672	11	10.27	3.9	445.8	0	-4,-6	-	-	19	ALTERNATIVE:2
ENSMUSG00000022629	Kif21a	ENSMUST00000229801	ENSMUSP00000155710	TRANSLATION	protein_coding	start/stop	-	-	250	0	1.14	0	29.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022629	Kif21a	ENSMUST00000100304	ENSMUSP00000097877	TRANSLATION	protein_coding	-	-	5	1672	11	10.27	3.9	445.8	0	-4,-6	-	-	19	ALTERNATIVE:2
ENSMUSG00000022629	Kif21a	ENSMUST00000067205	ENSMUSP00000066911	TRANSLATION	protein_coding	-	CCDS49707.1	1	1628	11	10.27	0.5	445.8	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000022629	Kif21a	ENSMUST00000230487	ENSMUSP00000154845	TRANSLATION	protein_coding	start/stop	-	-	221	0	3.11	0	60.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000187485	ENSMUSP00000140959	TRANSLATION	nonsense_mediated_decay	-	-	1	398	3	1.32	0	28.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000170845	ENSMUSP00000127122	TRANSLATION	protein_coding	-	-	5	642	0	3.79	0	208.1	13	-2,-5	-	-	0	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000186360	ENSMUSP00000140362	TRANSLATION	nonsense_mediated_decay	-	-	1	1143	11	14.64	0	554.4	10	3,-2	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000189200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034730	Adgrb1	ENSMUST00000190524	ENSMUSP00000140407	TRANSLATION	protein_coding	stop	-	3	112	0	0.46	0	89.3	7	-2,-5	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000187639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034730	Adgrb1	ENSMUST00000186095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034730	Adgrb1	ENSMUST00000189353	ENSMUSP00000140889	TRANSLATION	protein_coding	stop	-	5	147	0	1.59	0	131.7	9	-2,-5	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000187599	ENSMUSP00000140831	TRANSLATION	protein_coding	stop	-	3	136	0	1.39	0	121.1	9	-2,-5	-	-	-1	MINOR
ENSMUSG00000034730	Adgrb1	ENSMUST00000230935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034730	Adgrb1	ENSMUST00000042035	ENSMUSP00000046097	TRANSLATION	protein_coding	-	CCDS70635.1	1	1582	11	16.21	2.9	618.8	13	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034730	Adgrb1	ENSMUST00000185682	ENSMUSP00000139428	TRANSLATION	protein_coding	-	-	1	642	0	3.79	0	208.1	13	-2,-5	-	-	0	MINOR
ENSMUSG00000050014	Apol10b	ENSMUST00000089465	ENSMUSP00000086890	TRANSLATION	protein_coding	-	CCDS37128.2	1	334	0	0	0.5	287.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000093626	Ly6l	ENSMUST00000177479	ENSMUSP00000134982	TRANSLATION	protein_coding	-	CCDS84172.1	5	140	0	0	0.5	30	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000044294	Krt84	ENSMUST00000229893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044294	Krt84	ENSMUST00000023720	ENSMUSP00000023720	TRANSLATION	protein_coding	-	CCDS27853.1	1	603	0	5.2	0.5	478.4	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000023000	Dhh	ENSMUST00000023737	ENSMUSP00000023737	TRANSLATION	protein_coding	-	CCDS27810.1	1	396	11	2.6	3.9	516.2	0	1,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000023000	Dhh	ENSMUST00000229775	ENSMUSP00000155712	TRANSLATION	protein_coding	-	-	-	138	3	1	0	101.4	0	1,-3	-	-	2.976	MINOR
ENSMUSG00000023272	Creld2	ENSMUST00000024042	ENSMUSP00000024042	TRANSLATION	protein_coding	-	CCDS27733.1	1	350	13	0.51	0.5	82.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032987	Olfr281	ENSMUST00000217517	ENSMUSP00000150530	TRANSLATION	protein_coding	-	CCDS27794.1	5	311	0	0.36	5.1	182.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000032987	Olfr281	ENSMUST00000109163	ENSMUSP00000104791	TRANSLATION	protein_coding	-	CCDS27794.1	-	311	0	0.36	5.1	182.4	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000061397	Krt79	ENSMUST00000230441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061397	Krt79	ENSMUST00000023799	ENSMUSP00000023799	TRANSLATION	protein_coding	-	CCDS27867.1	1	531	0	4.82	4.1	426.8	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000061397	Krt79	ENSMUST00000230273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061397	Krt79	ENSMUST00000229195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032501	Trib1	ENSMUST00000118228	ENSMUSP00000112828	TRANSLATION	protein_coding	-	-	1	218	0	1.8	0	34.6	0	-4,0	-	-	5.226	MINOR
ENSMUSG00000032501	Trib1	ENSMUST00000067543	ENSMUSP00000068834	TRANSLATION	protein_coding	-	CCDS27499.1	1	372	0	2.8	7.5	111.8	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000078932	CN725425	ENSMUST00000190436	ENSMUSP00000140772	TRANSLATION	protein_coding	-	-	5	652	0	0	0	660.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000078932	CN725425	ENSMUST00000109284	ENSMUSP00000104907	TRANSLATION	protein_coding	start/stop	-	5	643	0	0	0	660.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018126	Baiap2l2	ENSMUST00000165408	ENSMUSP00000127816	TRANSLATION	protein_coding	-	CCDS37140.1	1	522	0	7.68	0.5	331.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000018126	Baiap2l2	ENSMUST00000170955	ENSMUSP00000125946	TRANSLATION	protein_coding	-	-	1	238	0	5.5	0	267.4	0	-4,-5	-	-	3.78	MINOR
ENSMUSG00000018126	Baiap2l2	ENSMUST00000167970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018126	Baiap2l2	ENSMUST00000169462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018126	Baiap2l2	ENSMUST00000170254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098112	Bin2	ENSMUST00000182775	ENSMUSP00000138673	TRANSLATION	protein_coding	-	-	5	473	0	6.39	0	102.8	0	-4,-6	-	-	8.646	MINOR
ENSMUSG00000098112	Bin2	ENSMUST00000182814	ENSMUSP00000138158	TRANSLATION	protein_coding	-	-	5	478	0	6.64	0	86.2	0	-4,-5	-	-	8.148	MINOR
ENSMUSG00000098112	Bin2	ENSMUST00000183193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098112	Bin2	ENSMUST00000183211	ENSMUSP00000138523	TRANSLATION	protein_coding	-	CCDS59622.1	5	505	0	7.39	0.5	125.4	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000098112	Bin2	ENSMUST00000182574	ENSMUSP00000138102	TRANSLATION	protein_coding	stop	-	5	210	0	4.89	0	59.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000098112	Bin2	ENSMUST00000182068	ENSMUSP00000138316	TRANSLATION	protein_coding	stop	-	5	160	0	2.39	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000098112	Bin2	ENSMUST00000182494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098112	Bin2	ENSMUST00000238935	ENSMUSP00000159169	TRANSLATION	protein_coding	-	-	-	518	0	7.25	0	125.4	0	-4,-6	-	-	11.718	ALTERNATIVE:2
ENSMUSG00000022391	Rangap1	ENSMUST00000171115	ENSMUSP00000130046	TRANSLATION	protein_coding	-	CCDS27670.1	1	589	0	11.28	4.1	275	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022391	Rangap1	ENSMUST00000230302	ENSMUSP00000155198	TRANSLATION	protein_coding	stop	-	-	257	0	5.13	0	13.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022391	Rangap1	ENSMUST00000052374	ENSMUSP00000057771	TRANSLATION	protein_coding	-	CCDS27670.1	1	589	0	11.28	4.1	275	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022391	Rangap1	ENSMUST00000229705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022391	Rangap1	ENSMUST00000230287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022391	Rangap1	ENSMUST00000230726	ENSMUSP00000155851	TRANSLATION	protein_coding	stop	-	-	144	0	2.63	0	13.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022391	Rangap1	ENSMUST00000170134	ENSMUSP00000126849	TRANSLATION	protein_coding	-	CCDS27670.1	1	589	0	11.28	4.1	275	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022285	Ywhaz	ENSMUST00000110359	ENSMUSP00000105988	TRANSLATION	protein_coding	stop	-	2	26	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022285	Ywhaz	ENSMUST00000126184	ENSMUSP00000115928	TRANSLATION	protein_coding	stop	-	2	88	0	2.25	0	108	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022285	Ywhaz	ENSMUST00000110361	ENSMUSP00000105990	TRANSLATION	protein_coding	-	CCDS27432.1	1	245	0	6.58	19.5	370	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022285	Ywhaz	ENSMUST00000151635	ENSMUSP00000120610	TRANSLATION	protein_coding	stop	-	5	44	0	1.25	0	45.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022285	Ywhaz	ENSMUST00000226851	ENSMUSP00000153983	TRANSLATION	protein_coding	stop	-	-	166	0	4.33	0	237.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022285	Ywhaz	ENSMUST00000227067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022285	Ywhaz	ENSMUST00000022894	ENSMUSP00000022894	TRANSLATION	protein_coding	-	CCDS27432.1	1	245	0	6.58	19.5	370	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022285	Ywhaz	ENSMUST00000154879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022285	Ywhaz	ENSMUST00000110362	ENSMUSP00000105991	TRANSLATION	protein_coding	-	CCDS27432.1	1	245	0	6.58	19.5	370	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022438	Parvb	ENSMUST00000131158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022438	Parvb	ENSMUST00000122818	ENSMUSP00000117594	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022438	Parvb	ENSMUST00000023072	ENSMUSP00000023072	TRANSLATION	protein_coding	-	CCDS37167.1	1	365	0	4.33	12.1	115	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022438	Parvb	ENSMUST00000146020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022456	Septin3	ENSMUST00000229067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022456	Septin3	ENSMUST00000230418	ENSMUSP00000154918	TRANSLATION	protein_coding	stop	-	-	75	2	2.33	0	120.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022456	Septin3	ENSMUST00000116423	ENSMUSP00000112124	TRANSLATION	protein_coding	-	CCDS37157.1	1	337	20	8.91	2.5	382.1	0	-4,-6	-	-	17.958	PRINCIPAL:2
ENSMUSG00000022456	Septin3	ENSMUST00000230799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022456	Septin3	ENSMUST00000230507	ENSMUSP00000155353	TRANSLATION	protein_coding	start	-	-	201	13	5.33	0	236.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022456	Septin3	ENSMUST00000230365	ENSMUSP00000155480	TRANSLATION	protein_coding	-	-	-	341	20	8.91	0	382.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000022456	Septin3	ENSMUST00000239048	ENSMUSP00000158860	TRANSLATION	protein_coding	-	-	-	818	20	8.91	0	382.1	0	-4,-7	-	-	17.958	ALTERNATIVE:2
ENSMUSG00000022456	Septin3	ENSMUST00000238416	ENSMUSP00000158597	TRANSLATION	protein_coding	-	-	-	822	20	8.91	0	382.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000022456	Septin3	ENSMUST00000023095	ENSMUSP00000023095	TRANSLATION	protein_coding	-	CCDS37157.1	1	337	20	8.91	2.5	382.1	0	-4,-6	-	-	17.958	PRINCIPAL:2
ENSMUSG00000022205	Sub1	ENSMUST00000110504	ENSMUSP00000106130	TRANSLATION	protein_coding	-	CCDS27387.1	5	127	0	2.03	17.5	83.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022205	Sub1	ENSMUST00000022816	ENSMUSP00000022816	TRANSLATION	protein_coding	-	CCDS27387.1	1	127	0	2.03	17.5	83.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022205	Sub1	ENSMUST00000129533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022205	Sub1	ENSMUST00000134414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036139	Hoxc9	ENSMUST00000001706	ENSMUSP00000001706	TRANSLATION	protein_coding	-	CCDS27893.1	1	260	0	1	8.3	277.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036139	Hoxc9	ENSMUST00000173306	ENSMUSP00000134197	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054863	Tafa5	ENSMUST00000068088	ENSMUSP00000064808	TRANSLATION	protein_coding	-	CCDS49693.1	1	125	0	0	15	150.4	0	4,-1	-	-	10	PRINCIPAL:2
ENSMUSG00000054863	Tafa5	ENSMUST00000230414	ENSMUSP00000155322	TRANSLATION	protein_coding	-	-	-	132	0	0	12.9	150.4	0	-3,-5	-	-	9.4	ALTERNATIVE:1
ENSMUSG00000033065	Pfkm	ENSMUST00000163507	ENSMUSP00000132803	TRANSLATION	protein_coding	-	CCDS27786.1	5	780	44	20.25	6.3	683.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033065	Pfkm	ENSMUST00000229280	ENSMUSP00000154896	TRANSLATION	protein_coding	stop	-	-	117	12	3.25	0	117.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033065	Pfkm	ENSMUST00000051226	ENSMUSP00000059801	TRANSLATION	protein_coding	-	CCDS27786.1	1	780	44	20.25	6.3	683.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033065	Pfkm	ENSMUST00000230445	ENSMUSP00000155809	TRANSLATION	protein_coding	-	CCDS27786.1	-	780	44	20.25	6.3	683.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033065	Pfkm	ENSMUST00000229344	ENSMUSP00000155453	TRANSLATION	protein_coding	stop	-	-	197	18	4.48	0	141.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038879	Nipal2	ENSMUST00000227126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038879	Nipal2	ENSMUST00000227336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038879	Nipal2	ENSMUST00000228073	ENSMUSP00000153811	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000038879	Nipal2	ENSMUST00000227222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038879	Nipal2	ENSMUST00000040791	ENSMUSP00000038922	TRANSLATION	protein_coding	-	CCDS37058.1	1	383	0	0	3.9	391.2	10	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000038879	Nipal2	ENSMUST00000228679	ENSMUSP00000153915	TRANSLATION	nonsense_mediated_decay	start	-	-	71	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022426	Josd1	ENSMUST00000023061	ENSMUSP00000023061	TRANSLATION	protein_coding	-	CCDS27647.1	1	202	0	1.08	12.8	94.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000050891	Tatdn1	ENSMUST00000228230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050891	Tatdn1	ENSMUST00000226505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050891	Tatdn1	ENSMUST00000226707	ENSMUSP00000154152	TRANSLATION	nonsense_mediated_decay	-	-	-	35	0	1.094	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050891	Tatdn1	ENSMUST00000226835	ENSMUSP00000154049	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	2.542	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050891	Tatdn1	ENSMUST00000228538	ENSMUSP00000154677	TRANSLATION	protein_coding	-	-	-	295	4	8.924	15	185.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000050891	Tatdn1	ENSMUST00000226931	ENSMUSP00000153820	TRANSLATION	protein_coding	stop	-	-	15	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050891	Tatdn1	ENSMUST00000226141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050891	Tatdn1	ENSMUST00000238706	ENSMUSP00000158637	TRANSLATION	nonsense_mediated_decay	start	-	-	122	2	3.13	0	53.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050891	Tatdn1	ENSMUST00000227540	ENSMUSP00000153779	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	1.594	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050891	Tatdn1	ENSMUST00000110155	ENSMUSP00000105783	TRANSLATION	protein_coding	-	CCDS37082.1	1	264	4	7.924	0.5	165.4	0	-4,-5	-	-	12.772	MINOR
ENSMUSG00000022346	Myc	ENSMUST00000022971	ENSMUSP00000022971	TRANSLATION	protein_coding	start	-	1	454	0	1	6.3	493.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022346	Myc	ENSMUST00000161976	ENSMUSP00000123821	TRANSLATION	protein_coding	-	CCDS49615.1	1	439	0	1	0.5	493.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022346	Myc	ENSMUST00000191178	ENSMUSP00000141139	TRANSLATION	protein_coding	start	CCDS49614.1	1	453	0	1	3.9	493.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022346	Myc	ENSMUST00000160009	ENSMUSP00000123852	TRANSLATION	protein_coding	-	CCDS49615.1	1	439	0	1	0.5	493.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022346	Myc	ENSMUST00000159327	ENSMUSP00000124758	TRANSLATION	protein_coding	-	CCDS49615.1	1	439	0	1	0.5	493.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022346	Myc	ENSMUST00000167731	ENSMUSP00000130285	TRANSLATION	protein_coding	start	-	1	453	0	1	3.9	493.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022346	Myc	ENSMUST00000159338	ENSMUSP00000125480	TRANSLATION	protein_coding	stop	-	2	32	0	0	0	34.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044021	Muc19	ENSMUST00000160242	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044021	Muc19	ENSMUST00000178108	ENSMUSP00000158692	TRANSLATION	protein_coding	start/stop	-	5	478	0	1.32	0	154.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044021	Muc19	ENSMUST00000180042	ENSMUSP00000158627	TRANSLATION	protein_coding	stop	-	5	715	0	1	0	274	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044021	Muc19	ENSMUST00000088547	ENSMUSP00000158657	TRANSLATION	protein_coding	-	-	1	304	0	0	0	32.5	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000059883	Irak4	ENSMUST00000138306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059883	Irak4	ENSMUST00000074936	ENSMUSP00000074471	TRANSLATION	protein_coding	-	CCDS27772.1	1	459	22	9.23	5.1	178.3	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000059883	Irak4	ENSMUST00000109248	ENSMUSP00000104871	TRANSLATION	protein_coding	-	-	1	453	22	8.9	0	176.7	0	-4,-7	-	-	17.244	MINOR
ENSMUSG00000022306	Zfpm2	ENSMUST00000229777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022306	Zfpm2	ENSMUST00000053467	ENSMUSP00000051335	TRANSLATION	protein_coding	-	CCDS27447.1	1	1151	20	1.235	9.6	28	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000022306	Zfpm2	ENSMUST00000230319	ENSMUSP00000155094	TRANSLATION	protein_coding	-	-	-	1019	20	0.6	2.4	28	0	-4,-5	-	-	15.405	MINOR
ENSMUSG00000022306	Zfpm2	ENSMUST00000230723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050164	Mchr1	ENSMUST00000166855	ENSMUSP00000126191	TRANSLATION	protein_coding	-	CCDS49675.1	1	353	0	0.78	6.4	152.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000033707	Lrrc24	ENSMUST00000146725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033707	Lrrc24	ENSMUST00000146855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033707	Lrrc24	ENSMUST00000049956	ENSMUSP00000061906	TRANSLATION	protein_coding	-	CCDS27590.1	1	521	0	2.48	0.5	150.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063296	Tmem117	ENSMUST00000229677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063296	Tmem117	ENSMUST00000080141	ENSMUSP00000079038	TRANSLATION	protein_coding	-	CCDS27774.1	1	514	0	0	6.3	769.7	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000042303	Sgsm3	ENSMUST00000138550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000149345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000132039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000139517	ENSMUSP00000122543	TRANSLATION	protein_coding	-	CCDS49673.2	1	750	0	8.2748	11.1	334.3	2	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042303	Sgsm3	ENSMUST00000143147	ENSMUSP00000115920	TRANSLATION	nonsense_mediated_decay	-	-	2	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000134511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000134559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000137255	ENSMUSP00000122110	TRANSLATION	protein_coding	stop	-	3	83	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000124845	ENSMUSP00000155794	TRANSLATION	protein_coding	start	-	1	651	0	7.4548	0	324.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000154904	ENSMUSP00000118050	TRANSLATION	protein_coding	start/stop	-	2	216	0	3.17	0	46.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000229727	ENSMUSP00000155753	TRANSLATION	protein_coding	stop	-	-	82	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000137004	ENSMUSP00000155595	TRANSLATION	protein_coding	-	-	1	67	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000228971	ENSMUSP00000155256	TRANSLATION	protein_coding	stop	-	-	95	0	0.5848	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042303	Sgsm3	ENSMUST00000156783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042303	Sgsm3	ENSMUST00000156064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022450	Ndufa6	ENSMUST00000229283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022450	Ndufa6	ENSMUST00000229537	ENSMUSP00000155547	TRANSLATION	nonsense_mediated_decay	start	-	-	52	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022450	Ndufa6	ENSMUST00000230589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022450	Ndufa6	ENSMUST00000230676	ENSMUSP00000155449	TRANSLATION	protein_coding	-	-	-	41	0	1.5	0	0	0	-4,-6	-	-	1.002	MINOR
ENSMUSG00000022450	Ndufa6	ENSMUST00000229427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022450	Ndufa6	ENSMUST00000230494	ENSMUSP00000155839	TRANSLATION	protein_coding	-	-	-	72	0	1.5	0	0	0	-4,-1	-	-	1.002	MINOR
ENSMUSG00000022450	Ndufa6	ENSMUST00000023085	ENSMUSP00000023085	TRANSLATION	protein_coding	-	CCDS27689.1	1	131	0	4	5.1	38.6	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000101113	1700025B11Rik	ENSMUST00000190233	ENSMUSP00000139560	TRANSLATION	protein_coding	-	-	1	93	0	0	0	30.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022407	Adsl	ENSMUST00000199284	ENSMUSP00000143222	TRANSLATION	nonsense_mediated_decay	start	-	5	36	4	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000164806	ENSMUSP00000131998	TRANSLATION	protein_coding	-	-	5	425	24	12.58	1.2	93.1	0	-4,-7	-	-	12.05	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000163575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022407	Adsl	ENSMUST00000200201	ENSMUSP00000143188	TRANSLATION	nonsense_mediated_decay	-	-	5	149	10	3.426	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000169238	ENSMUSP00000132423	TRANSLATION	nonsense_mediated_decay	-	-	5	164	10	3.926	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000023043	ENSMUSP00000023043	TRANSLATION	protein_coding	-	CCDS27664.1	1	484	24	13.58	5.1	160.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022407	Adsl	ENSMUST00000198302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022407	Adsl	ENSMUST00000168756	ENSMUSP00000127593	TRANSLATION	protein_coding	-	-	5	469	24	13.08	2.4	148.4	0	-4,-7	-	-	16.948	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000207170	ENSMUSP00000146546	TRANSLATION	protein_coding	stop	-	5	133	10	4.16	0	48.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000164371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022407	Adsl	ENSMUST00000170354	ENSMUSP00000132524	TRANSLATION	protein_coding	stop	-	5	31	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022407	Adsl	ENSMUST00000166711	ENSMUSP00000129601	TRANSLATION	nonsense_mediated_decay	-	-	2	164	10	3.926	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001281	Itgb7	ENSMUST00000229440	ENSMUSP00000155744	TRANSLATION	protein_coding	start	-	-	98	0	0.48	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001281	Itgb7	ENSMUST00000127014	ENSMUSP00000123227	TRANSLATION	protein_coding	stop	-	3	83	0	1.5	0	46.5	0	3,-1	-	-	-1	MINOR
ENSMUSG00000001281	Itgb7	ENSMUST00000230652	ENSMUSP00000155705	TRANSLATION	protein_coding	stop	-	-	10	1	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001281	Itgb7	ENSMUST00000230550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001281	Itgb7	ENSMUST00000001327	ENSMUSP00000001327	TRANSLATION	protein_coding	-	CCDS49740.1	1	806	13	14.24	1.5	522.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000093789	Methig1	ENSMUST00000175929	ENSMUSP00000135002	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	181	17	0	0	66.3	1	1,-3	-	-	-1	ALTERNATIVE:2
ENSMUSG00000093789	Methig1	ENSMUST00000075675	ENSMUSP00000075098	TRANSLATION	protein_coding,RT	-	CCDS27835.1	1	264	17	2.95	1.5	123.8	1	1,-3	-	-	-1	PRINCIPAL:2
ENSMUSG00000022314	Rad21	ENSMUST00000022927	ENSMUSP00000022927	TRANSLATION	protein_coding	-	CCDS27463.1	1	635	0	4.3	7.6	218.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000022314	Rad21	ENSMUST00000226529	ENSMUSP00000154815	TRANSLATION	protein_coding	stop	-	-	160	0	1.3	0	140.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037003	Tns2	ENSMUST00000169627	ENSMUSP00000129146	TRANSLATION	protein_coding	-	CCDS37224.1	1	1400	17	12.895	1.5	289.5	0	-4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000037003	Tns2	ENSMUST00000229908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037003	Tns2	ENSMUST00000229097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037003	Tns2	ENSMUST00000230474	ENSMUSP00000155309	TRANSLATION	protein_coding	-	-	-	1392	17	12.895	0	289.5	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000037003	Tns2	ENSMUST00000229800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037003	Tns2	ENSMUST00000229592	ENSMUSP00000155624	TRANSLATION	protein_coding	stop	-	-	168	8	1.22	0	29.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037003	Tns2	ENSMUST00000229035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037003	Tns2	ENSMUST00000046144	ENSMUSP00000041087	TRANSLATION	protein_coding	-	-	5	1407	17	12.895	0.5	289.5	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000037003	Tns2	ENSMUST00000228958	ENSMUSP00000155830	TRANSLATION	protein_coding	stop	-	-	1400	17	12.895	0.5	289.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053137	Mapk11	ENSMUST00000088823	ENSMUSP00000086204	TRANSLATION	protein_coding	-	CCDS27741.1	1	364	20	9.58	6.3	214.5	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000053137	Mapk11	ENSMUST00000230634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053137	Mapk11	ENSMUST00000228967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053137	Mapk11	ENSMUST00000230734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051934	Spats2	ENSMUST00000230628	ENSMUSP00000155049	TRANSLATION	protein_coding	stop	-	-	160	0	0	0	64.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051934	Spats2	ENSMUST00000229147	ENSMUSP00000155137	TRANSLATION	protein_coding	stop	-	-	255	0	0	0	132.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051934	Spats2	ENSMUST00000229663	ENSMUSP00000155814	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051934	Spats2	ENSMUST00000063517	ENSMUSP00000070549	TRANSLATION	protein_coding	-	CCDS27816.1	1	545	0	0	5.3	404.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000051934	Spats2	ENSMUST00000229073	ENSMUSP00000155388	TRANSLATION	protein_coding	stop	-	-	200	0	0	0	82.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051934	Spats2	ENSMUST00000229066	ENSMUSP00000154863	TRANSLATION	protein_coding	stop	-	-	160	0	0	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051934	Spats2	ENSMUST00000229493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001280	Sp1	ENSMUST00000001326	ENSMUSP00000001326	TRANSLATION	protein_coding	-	CCDS37229.1	1	781	12	1.8	0.5	66.4	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000001280	Sp1	ENSMUST00000163709	ENSMUSP00000130747	TRANSLATION	protein_coding	-	-	1	467	12	1.8	0	66.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000001280	Sp1	ENSMUST00000170884	ENSMUSP00000129638	TRANSLATION	protein_coding	stop	-	1	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001280	Sp1	ENSMUST00000168802	ENSMUSP00000127445	TRANSLATION	protein_coding	stop	-	1	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001280	Sp1	ENSMUST00000169619	ENSMUSP00000127714	TRANSLATION	protein_coding	stop	-	1	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001280	Sp1	ENSMUST00000165837	ENSMUSP00000126143	TRANSLATION	protein_coding	stop	-	3	183	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018868	Pnpla5	ENSMUST00000019012	ENSMUSP00000019012	TRANSLATION	protein_coding	-	CCDS49685.1	1	432	0	0	0.5	44.8	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000018868	Pnpla5	ENSMUST00000230566	ENSMUSP00000155268	TRANSLATION	protein_coding	-	-	-	433	0	0	0.5	44.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000116165	Pdxp	ENSMUST00000089378	ENSMUSP00000086796	TRANSLATION	protein_coding	-	CCDS27627.1	1	292	13	2	7.5	160.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000051920	Rspo2	ENSMUST00000226402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051920	Rspo2	ENSMUST00000063492	ENSMUSP00000067325	TRANSLATION	protein_coding	-	CCDS27451.1	1	243	0	2	13.7	161.3	0	0,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000051920	Rspo2	ENSMUST00000226810	ENSMUSP00000154600	TRANSLATION	protein_coding	-	CCDS27451.1	-	243	0	2	13.7	161.3	0	0,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000022146	Osmr	ENSMUST00000022746	ENSMUSP00000022746	TRANSLATION	protein_coding	-	CCDS27368.1	1	971	0	6.445	0.5	26.9	1	3,-1	-	-	11.838	PRINCIPAL:3
ENSMUSG00000022146	Osmr	ENSMUST00000177478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022146	Osmr	ENSMUST00000176826	ENSMUSP00000135204	TRANSLATION	protein_coding	-	CCDS79358.1	1	970	0	6.525	0.5	26.9	1	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000022146	Osmr	ENSMUST00000175862	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022146	Osmr	ENSMUST00000176554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022146	Osmr	ENSMUST00000177263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003354	Ccdc65	ENSMUST00000229471	ENSMUSP00000155191	TRANSLATION	protein_coding	-	-	-	104	0	0	0	75.3	0	-4,-5	-	-	4.53	MINOR
ENSMUSG00000003354	Ccdc65	ENSMUST00000003444	ENSMUSP00000003444	TRANSLATION	protein_coding	-	CCDS27802.1	1	493	0	0	0.5	99.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022297	Fzd6	ENSMUST00000228491	ENSMUSP00000154162	TRANSLATION	nonsense_mediated_decay	-	-	-	68	0	0.666	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022297	Fzd6	ENSMUST00000179165	ENSMUSP00000136328	TRANSLATION	protein_coding	-	CCDS27441.1	1	709	0	2.68	0.5	494.8	7	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022297	Fzd6	ENSMUST00000022906	ENSMUSP00000022906	TRANSLATION	protein_coding	-	CCDS27441.1	1	709	0	2.68	0.5	494.8	7	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022297	Fzd6	ENSMUST00000228922	ENSMUSP00000154443	TRANSLATION	nonsense_mediated_decay	-	-	-	80	0	0.6	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022297	Fzd6	ENSMUST00000227606	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034429	Zfp707	ENSMUST00000145100	ENSMUSP00000120565	TRANSLATION	protein_coding	start/stop	-	3	199	4	1.6	0	82.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034429	Zfp707	ENSMUST00000109967	ENSMUSP00000105593	TRANSLATION	protein_coding	-	CCDS37110.1	1	338	28	2.2	0.5	164.3	0	-4,-5	-	-	15.18	MINOR
ENSMUSG00000034429	Zfp707	ENSMUST00000109966	ENSMUSP00000105592	TRANSLATION	protein_coding	-	CCDS84174.1	1	384	28	2.6	0.5	195.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000034429	Zfp707	ENSMUST00000156444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034429	Zfp707	ENSMUST00000147641	ENSMUSP00000119705	TRANSLATION	protein_coding	start	-	1	391	28	2.6	0	195.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000034429	Zfp707	ENSMUST00000131496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034429	Zfp707	ENSMUST00000229652	ENSMUSP00000154921	TRANSLATION	protein_coding	-	-	-	317	28	1.7	0	113.3	0	-4,-5	-	-	10.968	MINOR
ENSMUSG00000022474	Pmm1	ENSMUST00000230229	ENSMUSP00000155419	TRANSLATION	protein_coding	-	-	-	165	15	4.58	0	196.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000022474	Pmm1	ENSMUST00000229385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022474	Pmm1	ENSMUST00000229957	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022474	Pmm1	ENSMUST00000147442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022474	Pmm1	ENSMUST00000229120	ENSMUSP00000155029	TRANSLATION	nonsense_mediated_decay	start	-	-	228	15	5.58	0	195.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022474	Pmm1	ENSMUST00000125593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022474	Pmm1	ENSMUST00000071462	ENSMUSP00000071405	TRANSLATION	protein_coding	-	CCDS70650.1	1	202	29	5.75	0.5	282.9	0	-4,-6	-	-	6.972	MINOR
ENSMUSG00000022474	Pmm1	ENSMUST00000155781	ENSMUSP00000115551	TRANSLATION	nonsense_mediated_decay	-	-	3	98	7	1.93	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022474	Pmm1	ENSMUST00000147645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022474	Pmm1	ENSMUST00000129406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022474	Pmm1	ENSMUST00000023112	ENSMUSP00000023112	TRANSLATION	protein_coding	-	CCDS27678.1	1	262	32	7.58	6.3	372.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000056069	Otulinl	ENSMUST00000232492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056069	Otulinl	ENSMUST00000226145	ENSMUSP00000154664	TRANSLATION	protein_coding	-	-	-	353	0	6.205	1.5	377.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056069	Otulinl	ENSMUST00000100739	ENSMUSP00000098305	TRANSLATION	protein_coding	-	CCDS27403.1	1	303	0	5.275	0.5	255.6	0	-4,-2	-	-	4.14	MINOR
ENSMUSG00000056069	Otulinl	ENSMUST00000231473	ENSMUSP00000156228	TRANSLATION	nonsense_mediated_decay	start	-	-	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056069	Otulinl	ENSMUST00000226170	ENSMUSP00000153902	TRANSLATION	protein_coding	-	-	-	317	0	4.655	0.5	284.8	0	-4,-2	-	-	3.324	MINOR
ENSMUSG00000056069	Otulinl	ENSMUST00000226581	ENSMUSP00000154311	TRANSLATION	protein_coding	start/stop	-	-	149	0	3.225	0	103.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022378	Fam49b	ENSMUST00000227024	ENSMUSP00000153790	TRANSLATION	protein_coding	stop	-	-	114	0	0	0	125.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022378	Fam49b	ENSMUST00000228908	ENSMUSP00000154547	TRANSLATION	protein_coding	stop	-	-	190	0	0	0	263.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022378	Fam49b	ENSMUST00000228226	ENSMUSP00000154320	TRANSLATION	protein_coding	-	CCDS27505.1	-	324	0	0	17	505.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022378	Fam49b	ENSMUST00000063838	ENSMUSP00000066359	TRANSLATION	protein_coding	-	CCDS27505.1	1	324	0	0	17	505.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022378	Fam49b	ENSMUST00000226675	ENSMUSP00000154205	TRANSLATION	protein_coding	stop	-	-	76	0	0	0	74.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022378	Fam49b	ENSMUST00000226129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022378	Fam49b	ENSMUST00000164532	ENSMUSP00000132486	TRANSLATION	protein_coding	-	CCDS27505.1	1	324	0	0	17	505.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022378	Fam49b	ENSMUST00000227118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050439	Enthd1	ENSMUST00000096347	ENSMUSP00000094072	TRANSLATION	protein_coding	-	CCDS49671.1	1	618	9	1.4	1.5	152.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000050439	Enthd1	ENSMUST00000229110	ENSMUSP00000155166	TRANSLATION	protein_coding	-	CCDS49671.1	-	618	9	1.4	1.5	152.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039168	Dap	ENSMUST00000186109	ENSMUSP00000141108	TRANSLATION	protein_coding	stop	-	5	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039168	Dap	ENSMUST00000044524	ENSMUSP00000047186	TRANSLATION	protein_coding	-	CCDS27406.1	1	102	0	0	14.8	107.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000039168	Dap	ENSMUST00000186547	ENSMUSP00000140481	TRANSLATION	protein_coding	-	-	3	79	0	0	0	78.7	0	-4,-5	-	-	4.278	MINOR
ENSMUSG00000039168	Dap	ENSMUST00000185618	ENSMUSP00000140568	TRANSLATION	protein_coding	-	-	3	62	0	0	0	64.7	0	-4,-1	-	-	3.438	MINOR
ENSMUSG00000039168	Dap	ENSMUST00000186425	ENSMUSP00000140007	TRANSLATION	protein_coding	-	-	3	79	0	0	0	78.7	0	-4,-5	-	-	4.278	MINOR
ENSMUSG00000022360	Atad2	ENSMUST00000227171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022360	Atad2	ENSMUST00000228783	ENSMUSP00000153936	TRANSLATION	protein_coding	-	-	-	1040	14	8.6	0	198.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022360	Atad2	ENSMUST00000226526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022360	Atad2	ENSMUST00000038194	ENSMUSP00000043691	TRANSLATION	protein_coding	-	CCDS37079.1	5	1364	14	8.6	0.5	198.8	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000022360	Atad2	ENSMUST00000226649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022360	Atad2	ENSMUST00000227134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022360	Atad2	ENSMUST00000226582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022360	Atad2	ENSMUST00000226507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033075	Senp1	ENSMUST00000183105	ENSMUSP00000138394	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033075	Senp1	ENSMUST00000182611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033075	Senp1	ENSMUST00000044189	ENSMUSP00000046598	TRANSLATION	protein_coding	-	CCDS49717.1	1	640	5	5.85	0.5	159.6	0	-4,-5	-	-	17	PRINCIPAL:2
ENSMUSG00000033075	Senp1	ENSMUST00000181349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033075	Senp1	ENSMUST00000180657	ENSMUSP00000138056	TRANSLATION	protein_coding	-	-	1	666	5	5.85	0.5	159.6	0	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000033075	Senp1	ENSMUST00000180531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033075	Senp1	ENSMUST00000181855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033075	Senp1	ENSMUST00000180461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033075	Senp1	ENSMUST00000180716	ENSMUSP00000138032	TRANSLATION	nonsense_mediated_decay	-	-	5	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051864	Tbc1d22a	ENSMUST00000063414	ENSMUSP00000065721	TRANSLATION	protein_coding	-	CCDS27729.1	1	516	0	9.13	1.5	163.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051864	Tbc1d22a	ENSMUST00000229242	ENSMUSP00000155727	TRANSLATION	protein_coding	start/stop	-	-	245	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022257	Laptm4b	ENSMUST00000228547	ENSMUSP00000154118	TRANSLATION	protein_coding	start	-	-	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022257	Laptm4b	ENSMUST00000226437	ENSMUSP00000154241	TRANSLATION	nonsense_mediated_decay	-	-	-	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022257	Laptm4b	ENSMUST00000022867	ENSMUSP00000022867	TRANSLATION	protein_coding	-	CCDS27416.1	1	227	0	0	7.1	0	4	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000022257	Laptm4b	ENSMUST00000226627	ENSMUSP00000153935	TRANSLATION	protein_coding	stop	-	-	159	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000063480	Snu13	ENSMUST00000072904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063480	Snu13	ENSMUST00000166578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063480	Snu13	ENSMUST00000080622	ENSMUSP00000091840	TRANSLATION	protein_coding	-	CCDS37154.1	1	128	0	2	21.5	88	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063480	Snu13	ENSMUST00000230953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022237	Ankrd33b	ENSMUST00000227391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022237	Ankrd33b	ENSMUST00000044324	ENSMUSP00000037918	TRANSLATION	nonsense_mediated_decay	-	-	1	127	0	0.49	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022237	Ankrd33b	ENSMUST00000110410	ENSMUSP00000106040	TRANSLATION	protein_coding	-	CCDS27408.1	1	477	0	2.29	0.5	55.8	0	-4,-5	-	-	11.244	PRINCIPAL:1
ENSMUSG00000022237	Ankrd33b	ENSMUST00000227867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022237	Ankrd33b	ENSMUST00000123325	ENSMUSP00000118984	TRANSLATION	protein_coding	-	CCDS49589.1	1	486	0	2.62	0.5	47.9	0	-4,-5	-	-	11.148	MINOR
ENSMUSG00000022237	Ankrd33b	ENSMUST00000156679	ENSMUSP00000117974	TRANSLATION	nonsense_mediated_decay	-	-	1	190	0	1.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022237	Ankrd33b	ENSMUST00000076942	ENSMUSP00000076209	TRANSLATION	protein_coding	-	CCDS27409.1	1	128	0	0.49	0.5	0	0	-4,-5	-	-	1.122	MINOR
ENSMUSG00000075470	Alg10b	ENSMUST00000231200	ENSMUSP00000154997	TRANSLATION	protein_coding	-	-	-	156	0	0	0	101.6	3	0,-3	-	-	0	MINOR
ENSMUSG00000075470	Alg10b	ENSMUST00000100309	ENSMUSP00000097882	TRANSLATION	protein_coding	-	CCDS27757.1	1	474	0	0	3.9	447	8	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000053508	Gtsf2	ENSMUST00000229158	ENSMUSP00000154981	TRANSLATION	nonsense_mediated_decay	-	-	-	83	5	0	0	45.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053508	Gtsf2	ENSMUST00000065978	ENSMUSP00000068158	TRANSLATION	protein_coding	-	CCDS37235.1	1	154	8	0	2.7	72.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048218	Amigo2	ENSMUST00000053106	ENSMUSP00000059913	TRANSLATION	protein_coding	-	CCDS27780.1	1	519	0	0.48	7.5	86.6	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000048218	Amigo2	ENSMUST00000229890	ENSMUSP00000155019	TRANSLATION	protein_coding	-	CCDS27780.1	-	519	0	0.48	7.5	86.6	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000022614	Lmf2	ENSMUST00000230523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000229291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000229308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000229111	ENSMUSP00000155618	TRANSLATION	protein_coding	stop	-	-	81	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000022614	Lmf2	ENSMUST00000229436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000023283	ENSMUSP00000023283	TRANSLATION	protein_coding	-	CCDS27746.1	1	702	0	0	1.5	548.8	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000022614	Lmf2	ENSMUST00000231107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000231067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022614	Lmf2	ENSMUST00000230112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009575	Cbx5	ENSMUST00000122182	ENSMUSP00000113158	TRANSLATION	protein_coding	-	CCDS37231.1	1	191	1	4	11.5	161.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000009575	Cbx5	ENSMUST00000108813	ENSMUSP00000104441	TRANSLATION	protein_coding	-	CCDS37231.1	1	191	1	4	11.5	161.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000009575	Cbx5	ENSMUST00000127191	ENSMUSP00000120837	TRANSLATION	protein_coding	stop	-	3	42	0	1	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009575	Cbx5	ENSMUST00000118152	ENSMUSP00000113157	TRANSLATION	protein_coding	-	CCDS37231.1	1	191	1	4	11.5	161.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000015363	Trabd	ENSMUST00000170754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015363	Trabd	ENSMUST00000163696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015363	Trabd	ENSMUST00000168863	ENSMUSP00000130292	TRANSLATION	protein_coding	stop	-	5	234	0	0	0	69.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015363	Trabd	ENSMUST00000169870	ENSMUSP00000126600	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015363	Trabd	ENSMUST00000081702	ENSMUSP00000080403	TRANSLATION	protein_coding	-	CCDS49696.1	1	376	0	0	3.9	98.7	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000015363	Trabd	ENSMUST00000165690	ENSMUSP00000131228	TRANSLATION	protein_coding	-	CCDS49696.1	1	376	0	0	3.9	98.7	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000015363	Trabd	ENSMUST00000169891	ENSMUSP00000128721	TRANSLATION	protein_coding	-	-	1	320	0	0	0	86.9	0	-4,-5	-	-	5.28	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000202527	ENSMUSP00000143898	TRANSLATION	protein_coding	stop	-	1	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000201484	ENSMUSP00000144582	TRANSLATION	protein_coding	stop	-	1	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000201438	ENSMUSP00000144232	TRANSLATION	protein_coding	start	-	3	132	0	2.928	0	112.2	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000202347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023033	Scn8a	ENSMUST00000202349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023033	Scn8a	ENSMUST00000202452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023033	Scn8a	ENSMUST00000202971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023033	Scn8a	ENSMUST00000202071	ENSMUSP00000144501	TRANSLATION	protein_coding	stop	-	1	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000200933	ENSMUSP00000144173	TRANSLATION	protein_coding	stop	-	1	1	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000108910	ENSMUSP00000104538	TRANSLATION	protein_coding	-	CCDS57011.1	1	1978	4	13.298	7.5	1342	24	-4,-5	-	-	16.246	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000096198	ENSMUSP00000093912	TRANSLATION	protein_coding	-	-	1	102	0	0.56	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000200959	ENSMUSP00000144223	TRANSLATION	protein_coding	-	-	3	100	0	0.56	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000202702	ENSMUSP00000143876	TRANSLATION	protein_coding	start/stop	-	5	539	0	4.74	0	491	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000108909	ENSMUSP00000104537	TRANSLATION	protein_coding	-	-	5	1988	4	13.298	2.9	1354.6	24	-4,-5	-	-	14.878	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000201518	ENSMUSP00000143879	TRANSLATION	protein_coding	stop	-	1	804	0	6.998	0	552.8	13	-4,-5	-	-	-1	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000200963	ENSMUSP00000144371	TRANSLATION	protein_coding	-	-	5	1937	4	13.598	5.3	1234.2	27	-4,-5	-	-	10.588	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000108908	ENSMUSP00000104536	TRANSLATION	protein_coding	-	CCDS57011.1	5	1978	4	13.298	7.5	1342	24	-4,-5	-	-	16.246	MINOR
ENSMUSG00000023033	Scn8a	ENSMUST00000201246	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023033	Scn8a	ENSMUST00000201549	ENSMUSP00000144013	TRANSLATION	protein_coding	-	CCDS57010.1	5	1978	4	14.298	7.5	1344.7	27	-4,-5	-	-	18.406	PRINCIPAL:1
ENSMUSG00000023033	Scn8a	ENSMUST00000082209	ENSMUSP00000080842	TRANSLATION	protein_coding	-	CCDS57010.1	5	1978	4	14.298	7.5	1344.7	27	-4,-5	-	-	18.406	PRINCIPAL:1
ENSMUSG00000048424	Ranbp3l	ENSMUST00000053308	ENSMUSP00000055750	TRANSLATION	protein_coding	-	-	5	490	0	3.4	0	49.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048424	Ranbp3l	ENSMUST00000227191	ENSMUSP00000154327	TRANSLATION	protein_coding	start	-	-	354	0	3.4	0	49.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048424	Ranbp3l	ENSMUST00000229662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048424	Ranbp3l	ENSMUST00000166524	ENSMUSP00000130916	TRANSLATION	protein_coding	stop	-	2	114	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048424	Ranbp3l	ENSMUST00000228227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005354	Txn2	ENSMUST00000173631	ENSMUSP00000134682	TRANSLATION	protein_coding	start	-	2	130	8	3.3	0	99.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005354	Txn2	ENSMUST00000109748	ENSMUSP00000105370	TRANSLATION	protein_coding	-	CCDS27606.1	1	166	8	3.3	5.1	99.5	0	-3,0	-	-	20	PRINCIPAL:1
ENSMUSG00000005354	Txn2	ENSMUST00000109747	ENSMUSP00000105369	TRANSLATION	protein_coding	-	-	1	149	5	2.75	0	67.3	0	-3,0	-	-	12.708	MINOR
ENSMUSG00000005354	Txn2	ENSMUST00000174529	ENSMUSP00000133605	TRANSLATION	protein_coding	start	-	2	106	5	1.62	0	60.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005354	Txn2	ENSMUST00000100486	ENSMUSP00000098055	TRANSLATION	protein_coding	-	-	1	119	0	1.3	0	0	0	-3,0	-	-	1.998	MINOR
ENSMUSG00000005354	Txn2	ENSMUST00000173561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005354	Txn2	ENSMUST00000005487	ENSMUSP00000005487	TRANSLATION	protein_coding	-	CCDS27606.1	1	166	8	3.3	5.1	99.5	0	-3,0	-	-	20	PRINCIPAL:1
ENSMUSG00000060429	Sntb1	ENSMUST00000039769	ENSMUSP00000041294	TRANSLATION	protein_coding	-	CCDS27479.1	1	537	0	1.72	0.5	106.7	0	0,2	-	-	12	PRINCIPAL:1
ENSMUSG00000060429	Sntb1	ENSMUST00000140574	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060429	Sntb1	ENSMUST00000110200	ENSMUSP00000105829	TRANSLATION	protein_coding	-	-	1	276	0	1.12	0	68.5	0	0,2	-	-	7.614	MINOR
ENSMUSG00000033006	Sox10	ENSMUST00000040019	ENSMUSP00000039466	TRANSLATION	protein_coding	-	CCDS49668.1	1	466	0	1.9	7.5	186.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033006	Sox10	ENSMUST00000230891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033006	Sox10	ENSMUST00000230532	ENSMUSP00000155574	TRANSLATION	protein_coding	-	CCDS49668.1	-	466	0	1.9	7.5	186.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033006	Sox10	ENSMUST00000230261	ENSMUSP00000155639	TRANSLATION	protein_coding	stop	-	-	205	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022568	Scrib	ENSMUST00000231218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022568	Scrib	ENSMUST00000063747	ENSMUSP00000068056	TRANSLATION	protein_coding	-	CCDS79381.1	1	1612	0	15.575	0.5	338.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022568	Scrib	ENSMUST00000148211	ENSMUSP00000114573	TRANSLATION	protein_coding	stop	-	2	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022568	Scrib	ENSMUST00000229940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022568	Scrib	ENSMUST00000136390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022568	Scrib	ENSMUST00000109946	ENSMUSP00000105572	TRANSLATION	protein_coding	-	CCDS79382.1	1	1637	0	15.575	0.5	338.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022568	Scrib	ENSMUST00000002603	ENSMUSP00000002603	TRANSLATION	protein_coding	-	CCDS27560.1	1	1665	0	15.575	0.5	338.4	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000022568	Scrib	ENSMUST00000229896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022568	Scrib	ENSMUST00000230104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022568	Scrib	ENSMUST00000145830	ENSMUSP00000115329	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022568	Scrib	ENSMUST00000230217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022568	Scrib	ENSMUST00000230249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056293	Gsdmc2	ENSMUST00000188404	ENSMUSP00000141066	TRANSLATION	protein_coding	-	CCDS37087.1	1	480	0	4.95	0.5	515.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056293	Gsdmc2	ENSMUST00000188691	ENSMUSP00000140487	TRANSLATION	protein_coding	-	CCDS37087.1	1	480	0	4.95	0.5	515.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056293	Gsdmc2	ENSMUST00000089900	ENSMUSP00000087344	TRANSLATION	protein_coding	-	CCDS37087.1	5	480	0	4.95	0.5	515.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022265	Ank	ENSMUST00000022875	ENSMUSP00000022875	TRANSLATION	protein_coding	-	CCDS27402.1	1	492	0	0	15.8	730.3	0	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022265	Ank	ENSMUST00000134004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018042	Cyb5r3	ENSMUST00000018186	ENSMUSP00000018186	TRANSLATION	protein_coding	-	CCDS27698.1	1	301	22	7	11.5	245.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000018042	Cyb5r3	ENSMUST00000162178	ENSMUSP00000125636	TRANSLATION	protein_coding	-	-	1	313	20	6.2	0	200.3	0	-4,-5	-	-	12.366	MINOR
ENSMUSG00000018042	Cyb5r3	ENSMUST00000162834	ENSMUSP00000124062	TRANSLATION	protein_coding	-	-	5	278	22	7	4.1	245.3	0	-4,-5	-	-	18.885	MINOR
ENSMUSG00000002524	Puf60	ENSMUST00000228459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002524	Puf60	ENSMUST00000100527	ENSMUSP00000098096	TRANSLATION	protein_coding	-	CCDS37112.1	1	564	0	6.85	3.9	126.7	0	-4,-6	-	-	13	PRINCIPAL:4
ENSMUSG00000002524	Puf60	ENSMUST00000229496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002524	Puf60	ENSMUST00000229030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002524	Puf60	ENSMUST00000229474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002524	Puf60	ENSMUST00000227251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002524	Puf60	ENSMUST00000230924	ENSMUSP00000155707	TRANSLATION	nonsense_mediated_decay	-	-	-	137	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002524	Puf60	ENSMUST00000230968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002524	Puf60	ENSMUST00000227316	ENSMUSP00000154177	TRANSLATION	nonsense_mediated_decay	start	-	-	140	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002524	Puf60	ENSMUST00000002599	ENSMUSP00000002599	TRANSLATION	protein_coding	-	CCDS37111.1	1	547	0	6.55	3.9	126.7	0	-4,-6	-	-	12.4	ALTERNATIVE:2
ENSMUSG00000002524	Puf60	ENSMUST00000230143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047565	Acot10	ENSMUST00000052910	ENSMUSP00000051333	TRANSLATION	protein_coding	-	CCDS27395.1	-	439	21	0.24	1.5	0	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000033697	Arhgap39	ENSMUST00000177026	ENSMUSP00000135896	TRANSLATION	protein_coding	-	-	5	39	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033697	Arhgap39	ENSMUST00000077821	ENSMUSP00000076993	TRANSLATION	protein_coding	-	CCDS27592.2	1	1078	0	3.365	1.5	212.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000033697	Arhgap39	ENSMUST00000176855	ENSMUSP00000135043	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033697	Arhgap39	ENSMUST00000239003	ENSMUSP00000158945	TRANSLATION	protein_coding	-	CCDS49654.1	-	1109	0	3.365	1.5	204.3	0	-4,-5	-	-	11.514	ALTERNATIVE:2
ENSMUSG00000033697	Arhgap39	ENSMUST00000239134	ENSMUSP00000158984	TRANSLATION	protein_coding	-	-	-	1076	0	3.365	1.5	212.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033697	Arhgap39	ENSMUST00000177011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033697	Arhgap39	ENSMUST00000176736	ENSMUSP00000135154	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033697	Arhgap39	ENSMUST00000036176	ENSMUSP00000036697	TRANSLATION	protein_coding	-	-	5	1107	0	3.365	1.5	204.3	0	-4,-5	-	-	11.514	ALTERNATIVE:2
ENSMUSG00000033697	Arhgap39	ENSMUST00000177255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033697	Arhgap39	ENSMUST00000176219	ENSMUSP00000135340	TRANSLATION	protein_coding	-	-	5	42	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033697	Arhgap39	ENSMUST00000175843	ENSMUSP00000135132	TRANSLATION	protein_coding	stop	-	3	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033697	Arhgap39	ENSMUST00000176724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072235	Tuba1a	ENSMUST00000097014	ENSMUSP00000094778	TRANSLATION	protein_coding	-	CCDS37196.1	1	451	25	3	17.5	404.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022246	Rai14	ENSMUST00000090339	ENSMUSP00000087815	TRANSLATION	protein_coding	-	CCDS37043.1	1	979	0	6.548	1.5	134.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000022246	Rai14	ENSMUST00000169385	ENSMUSP00000126325	TRANSLATION	protein_coding	-	CCDS37043.1	1	979	0	6.548	1.5	134.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000022246	Rai14	ENSMUST00000226737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022246	Rai14	ENSMUST00000227464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022246	Rai14	ENSMUST00000227366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022246	Rai14	ENSMUST00000226530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022246	Rai14	ENSMUST00000227506	ENSMUSP00000153969	TRANSLATION	protein_coding	-	-	-	950	0	6.398	1.5	134.1	0	-4,-5	-	-	11.7	ALTERNATIVE:2
ENSMUSG00000022272	Myo10	ENSMUST00000127486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022272	Myo10	ENSMUST00000124966	ENSMUSP00000120817	TRANSLATION	protein_coding	stop	-	3	104	0	2	0	59.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000126076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022272	Myo10	ENSMUST00000145587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022272	Myo10	ENSMUST00000137601	ENSMUSP00000118280	TRANSLATION	protein_coding	stop	-	1	786	15	19.91	0	849.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000110457	ENSMUSP00000106087	TRANSLATION	protein_coding	-	CCDS37049.1	1	2062	15	37.11	1.5	1199.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022272	Myo10	ENSMUST00000022882	ENSMUSP00000022882	TRANSLATION	protein_coding	-	-	1	1316	0	17.7	0	409.3	0	-4,-1	-	-	0	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000130517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022272	Myo10	ENSMUST00000151360	ENSMUSP00000119367	TRANSLATION	protein_coding	stop	-	5	51	0	1.58	0	51.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000135173	ENSMUSP00000118744	TRANSLATION	protein_coding	stop	-	2	179	0	4.58	0	137.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000131834	ENSMUSP00000119200	TRANSLATION	protein_coding	stop	-	2	25	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000125667	ENSMUSP00000120566	TRANSLATION	protein_coding	stop	-	5	237	0	6.08	0	136.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022272	Myo10	ENSMUST00000135981	ENSMUSP00000123057	TRANSLATION	protein_coding	start/stop	-	5	242	0	6	0	164.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000049152	Ugt3a2	ENSMUST00000072403	ENSMUSP00000072236	TRANSLATION	protein_coding	-	CCDS27375.1	1	523	16	1.64	0.5	328.3	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000049152	Ugt3a2	ENSMUST00000144755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022583	Ly6f	ENSMUST00000189654	ENSMUSP00000140899	TRANSLATION	protein_coding	-	CCDS27543.1	2	134	0	0	0.5	61.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022583	Ly6f	ENSMUST00000023247	ENSMUSP00000023247	TRANSLATION	protein_coding	-	CCDS27543.1	5	134	0	0	0.5	61.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022489	Pde1b	ENSMUST00000227955	ENSMUSP00000153722	TRANSLATION	protein_coding	-	-	-	516	4	9.86	7.5	389.8	0	-4,-2	-	-	19	ALTERNATIVE:1
ENSMUSG00000022489	Pde1b	ENSMUST00000226493	ENSMUSP00000154483	TRANSLATION	protein_coding	stop	-	-	192	0	1.91	0	107.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022489	Pde1b	ENSMUST00000227925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022489	Pde1b	ENSMUST00000023132	ENSMUSP00000023132	TRANSLATION	protein_coding	-	CCDS27904.1	1	535	4	9.86	7.5	389.8	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000022489	Pde1b	ENSMUST00000226468	ENSMUSP00000153865	TRANSLATION	nonsense_mediated_decay	-	-	-	458	4	8.66	0	389.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000116024	Gm49527	ENSMUST00000229782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116024	Gm49527	ENSMUST00000230214	ENSMUSP00000155009	TRANSLATION	protein_coding,RT	-	-	-	86	0	1	0	74.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000054136	Adm2	ENSMUST00000066991	ENSMUSP00000064761	TRANSLATION	protein_coding	-	CCDS27744.1	1	150	0	0	1.5	27.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000062906	Hdac10	ENSMUST00000143465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062906	Hdac10	ENSMUST00000128908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062906	Hdac10	ENSMUST00000134111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062906	Hdac10	ENSMUST00000082197	ENSMUSP00000080832	TRANSLATION	protein_coding	-	CCDS27739.1	1	666	3	11.695	1.5	273	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000062906	Hdac10	ENSMUST00000138245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062906	Hdac10	ENSMUST00000129398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062906	Hdac10	ENSMUST00000153195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062906	Hdac10	ENSMUST00000109347	ENSMUSP00000104971	TRANSLATION	protein_coding	-	-	5	470	2	9.56	0	202.3	0	-4,-5	-	-	5.487	MINOR
ENSMUSG00000108748	Gm44579	ENSMUST00000142443	ENSMUSP00000153744	TRANSLATION	protein_coding,RT	-	-	5	318	0	0.32	0.5	161.3	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000036800	Fam135b	ENSMUST00000229189	ENSMUSP00000155239	TRANSLATION	protein_coding	stop	-	-	159	0	0	0	42.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036800	Fam135b	ENSMUST00000229634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036800	Fam135b	ENSMUST00000230569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036800	Fam135b	ENSMUST00000022953	ENSMUSP00000022953	TRANSLATION	protein_coding	-	CCDS49626.1	5	1403	5	0	0.5	253.2	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000062154	Tex33	ENSMUST00000074380	ENSMUSP00000073984	TRANSLATION	protein_coding	-	CCDS49665.1	1	266	0	0	1.5	233.3	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000062154	Tex33	ENSMUST00000169575	ENSMUSP00000130849	TRANSLATION	protein_coding	-	CCDS49664.1	5	241	0	0	0.5	233.3	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000062154	Tex33	ENSMUST00000165170	ENSMUSP00000133264	TRANSLATION	protein_coding	-	CCDS49665.1	1	266	0	0	1.5	233.3	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000062154	Tex33	ENSMUST00000229878	ENSMUSP00000154854	TRANSLATION	protein_coding	stop	-	-	135	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060284	Sp7	ENSMUST00000229464	ENSMUSP00000154859	TRANSLATION	protein_coding	-	-	-	410	12	0.2	3.9	67.3	0	-4,-6	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000060284	Sp7	ENSMUST00000078508	ENSMUSP00000077596	TRANSLATION	protein_coding	-	CCDS37228.1	1	428	12	0.2	5.1	67.3	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000060284	Sp7	ENSMUST00000231100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023010	Tmbim6	ENSMUST00000231173	ENSMUSP00000155747	TRANSLATION	protein_coding	start	-	-	26	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023010	Tmbim6	ENSMUST00000160635	ENSMUSP00000124651	TRANSLATION	protein_coding	-	CCDS37201.1	5	237	0	0	4.7	144.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000023010	Tmbim6	ENSMUST00000160454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023010	Tmbim6	ENSMUST00000229392	ENSMUSP00000155580	TRANSLATION	protein_coding	start/stop	-	-	193	0	0	0	130.1	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000023010	Tmbim6	ENSMUST00000162624	ENSMUSP00000125091	TRANSLATION	protein_coding	stop	-	3	204	0	0	0	120.8	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000023010	Tmbim6	ENSMUST00000159531	ENSMUSP00000125318	TRANSLATION	protein_coding	-	CCDS37201.1	5	237	0	0	4.7	144.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000023010	Tmbim6	ENSMUST00000161778	ENSMUSP00000124805	TRANSLATION	protein_coding	stop	-	5	235	0	0	4.7	144.2	7	-4,-7	-	-	-1	MINOR
ENSMUSG00000023010	Tmbim6	ENSMUST00000023749	ENSMUSP00000023749	TRANSLATION	protein_coding	-	CCDS37201.1	1	237	0	0	4.7	144.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000023010	Tmbim6	ENSMUST00000162274	ENSMUSP00000125437	TRANSLATION	protein_coding	stop	-	1	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023010	Tmbim6	ENSMUST00000231147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023010	Tmbim6	ENSMUST00000161250	ENSMUSP00000125563	TRANSLATION	protein_coding	-	CCDS37201.1	5	237	0	0	4.7	144.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000023010	Tmbim6	ENSMUST00000159209	ENSMUSP00000125117	TRANSLATION	protein_coding	-	CCDS37201.1	5	237	0	0	4.7	144.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000037465	Klf10	ENSMUST00000074043	ENSMUSP00000073690	TRANSLATION	protein_coding	-	CCDS27438.1	1	479	12	2.2	6.3	57.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000037465	Klf10	ENSMUST00000228732	ENSMUSP00000153975	TRANSLATION	protein_coding	stop	-	-	151	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037465	Klf10	ENSMUST00000228416	ENSMUSP00000154669	TRANSLATION	protein_coding	stop	-	-	71	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037465	Klf10	ENSMUST00000227920	ENSMUSP00000154265	TRANSLATION	protein_coding	-	-	-	434	8	1.466	0.5	35.6	0	-4,-5	-	-	11.022	MINOR
ENSMUSG00000037465	Klf10	ENSMUST00000228772	ENSMUSP00000154055	TRANSLATION	protein_coding	start/stop	-	-	176	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037465	Klf10	ENSMUST00000226363	ENSMUSP00000154702	TRANSLATION	protein_coding	-	-	-	464	12	2.2	0	57.9	0	-4,-5	-	-	18	MINOR
ENSMUSG00000022587	Ly6e	ENSMUST00000191439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022587	Ly6e	ENSMUST00000188042	ENSMUSP00000141059	TRANSLATION	protein_coding	-	CCDS27538.1	3	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000189186	ENSMUSP00000139477	TRANSLATION	protein_coding	stop	-	1	63	0	0	0	28.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022587	Ly6e	ENSMUST00000185861	ENSMUSP00000141145	TRANSLATION	protein_coding	-	CCDS27538.1	2	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000188503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022587	Ly6e	ENSMUST00000187284	ENSMUSP00000140553	TRANSLATION	protein_coding	-	CCDS27538.1	5	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000051698	ENSMUSP00000056703	TRANSLATION	protein_coding	-	CCDS27538.1	1	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000187606	ENSMUSP00000139471	TRANSLATION	protein_coding	-	CCDS27538.1	2	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000191145	ENSMUSP00000140829	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	54.4	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022587	Ly6e	ENSMUST00000191127	ENSMUSP00000139966	TRANSLATION	protein_coding	stop	-	3	119	0	0	0	58.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022587	Ly6e	ENSMUST00000191436	ENSMUSP00000139549	TRANSLATION	protein_coding	-	CCDS27538.1	1	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000190810	ENSMUSP00000139482	TRANSLATION	protein_coding	stop	-	1	117	0	0	0	58.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022587	Ly6e	ENSMUST00000186927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022587	Ly6e	ENSMUST00000169343	ENSMUSP00000132081	TRANSLATION	protein_coding	-	CCDS27538.1	5	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000188866	ENSMUSP00000140145	TRANSLATION	protein_coding	-	CCDS27538.1	3	136	0	0	0.5	58.7	1	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022587	Ly6e	ENSMUST00000185863	ENSMUSP00000140060	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	48.2	0	1,-2	-	-	-1	MINOR
ENSMUSG00000022330	Osr2	ENSMUST00000226838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022330	Osr2	ENSMUST00000227655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022330	Osr2	ENSMUST00000228152	ENSMUSP00000154286	TRANSLATION	protein_coding	-	-	-	312	20	3.364	13.7	109.4	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000022330	Osr2	ENSMUST00000228684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022330	Osr2	ENSMUST00000022952	ENSMUSP00000022952	TRANSLATION	protein_coding	-	CCDS27422.1	1	276	12	2.05	9.5	61.2	0	-4,-6	-	-	9.822	MINOR
ENSMUSG00000022347	A1bg	ENSMUST00000228881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022347	A1bg	ENSMUST00000096418	ENSMUSP00000094151	TRANSLATION	protein_coding	-	CCDS37085.1	1	512	0	2.28	1.5	73.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022347	A1bg	ENSMUST00000228632	ENSMUSP00000154317	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	28.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022559	Fbxl6	ENSMUST00000229273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022559	Fbxl6	ENSMUST00000023219	ENSMUSP00000023219	TRANSLATION	protein_coding	-	CCDS49653.1	1	535	0	0	1.5	43.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022559	Fbxl6	ENSMUST00000228994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022559	Fbxl6	ENSMUST00000230513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022559	Fbxl6	ENSMUST00000229813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022559	Fbxl6	ENSMUST00000230938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045665	Mfsd5	ENSMUST00000051341	ENSMUSP00000061997	TRANSLATION	protein_coding	-	CCDS27877.1	1	450	0	0	9.5	272.3	0	3,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000056184	Olfr283	ENSMUST00000215830	ENSMUSP00000150348	TRANSLATION	protein_coding	-	CCDS27792.1	5	309	0	0.28	5.1	184.2	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000056184	Olfr283	ENSMUST00000057386	ENSMUSP00000051239	TRANSLATION	protein_coding	-	CCDS27792.1	-	309	0	0.28	5.1	184.2	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022144	Gdnf	ENSMUST00000022744	ENSMUSP00000022744	TRANSLATION	protein_coding	-	CCDS27371.1	1	240	0	1	1.5	45.3	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000022155	Mroh2b	ENSMUST00000226277	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022155	Mroh2b	ENSMUST00000228458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022155	Mroh2b	ENSMUST00000226849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022155	Mroh2b	ENSMUST00000045736	ENSMUSP00000036148	TRANSLATION	protein_coding	-	CCDS49572.1	5	1581	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022488	Nckap1l	ENSMUST00000230276	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022488	Nckap1l	ENSMUST00000229835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022488	Nckap1l	ENSMUST00000047405	ENSMUSP00000035400	TRANSLATION	protein_coding	-	CCDS37236.1	1	1134	0	28.55	5.1	1594.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022488	Nckap1l	ENSMUST00000229127	ENSMUSP00000154960	TRANSLATION	nonsense_mediated_decay	-	-	-	298	0	7	0	412.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022488	Nckap1l	ENSMUST00000229468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022377	Asap1	ENSMUST00000176427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022377	Asap1	ENSMUST00000177371	ENSMUSP00000135643	TRANSLATION	protein_coding	-	CCDS70631.1	1	1124	4	15.84	0.5	325.6	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000177374	ENSMUSP00000134825	TRANSLATION	protein_coding	-	CCDS56986.1	1	1147	4	15.84	0.5	325.6	0	-4,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000022377	Asap1	ENSMUST00000110114	ENSMUSP00000105741	TRANSLATION	protein_coding	-	-	5	1090	4	15.75	0.5	325.6	0	-4,-2	-	-	15.82	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000176384	ENSMUSP00000135190	TRANSLATION	protein_coding	-	CCDS70634.1	1	1090	4	15.84	0.5	325.6	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000176821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022377	Asap1	ENSMUST00000023008	ENSMUSP00000023008	TRANSLATION	protein_coding	-	-	5	1147	4	15.75	0.5	325.6	0	-4,-2	-	-	15.82	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000176358	ENSMUSP00000135239	TRANSLATION	protein_coding	start/stop	-	5	211	0	3.09	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022377	Asap1	ENSMUST00000177475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022377	Asap1	ENSMUST00000175793	ENSMUSP00000135718	TRANSLATION	protein_coding	-	-	5	1135	4	15.72	0	325.6	0	-4,-2	-	-	15.76	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000175963	ENSMUSP00000135047	TRANSLATION	protein_coding	stop	-	2	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022377	Asap1	ENSMUST00000175799	ENSMUSP00000135359	TRANSLATION	protein_coding	-	CCDS70633.1	5	1087	4	15.84	0.5	325.6	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000176014	ENSMUSP00000135172	TRANSLATION	protein_coding	-	-	5	1144	4	15.84	1	325.6	0	-4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000177083	ENSMUSP00000134877	TRANSLATION	protein_coding	-	CCDS70632.1	1	1112	4	15.72	0.5	325.6	0	-4,-5	-	-	15.76	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000175710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022377	Asap1	ENSMUST00000177035	ENSMUSP00000135346	TRANSLATION	protein_coding	-	-	5	1075	4	15.72	0	325.6	0	-4,-2	-	-	15.76	ALTERNATIVE:2
ENSMUSG00000022377	Asap1	ENSMUST00000176516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022377	Asap1	ENSMUST00000176909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022377	Asap1	ENSMUST00000110115	ENSMUSP00000105742	TRANSLATION	protein_coding	-	-	5	1132	4	15.72	0	325.6	0	-4,-2	-	-	15.76	ALTERNATIVE:2
ENSMUSG00000022420	Dnal4	ENSMUST00000023055	ENSMUSP00000023055	TRANSLATION	protein_coding	-	CCDS27650.1	1	105	0	2.23	12	96	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022420	Dnal4	ENSMUST00000230645	ENSMUSP00000154908	TRANSLATION	protein_coding	start	-	-	59	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022420	Dnal4	ENSMUST00000162713	ENSMUSP00000154848	TRANSLATION	protein_coding	-	CCDS27650.1	3	105	0	2.23	12	96	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022420	Dnal4	ENSMUST00000069877	ENSMUSP00000070325	TRANSLATION	protein_coding	-	-	5	139	0	1.75	0	75.7	0	-4,-5	-	-	9.444	MINOR
ENSMUSG00000022420	Dnal4	ENSMUST00000161646	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022420	Dnal4	ENSMUST00000229644	ENSMUSP00000155613	TRANSLATION	protein_coding	-	-	-	77	0	1.63	0	67.3	0	-4,-5	-	-	8.592	MINOR
ENSMUSG00000047888	Tnrc6b	ENSMUST00000228124	ENSMUSP00000154573	TRANSLATION	protein_coding	start	-	-	958	0	1.6	0	404.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047888	Tnrc6b	ENSMUST00000228071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000226461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000227449	ENSMUSP00000153748	TRANSLATION	protein_coding	start/stop	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047888	Tnrc6b	ENSMUST00000227546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000228525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000226442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000067689	ENSMUSP00000064336	TRANSLATION	protein_coding	-	CCDS37146.1	5	1810	0	1.6	0.5	441.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047888	Tnrc6b	ENSMUST00000228320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047888	Tnrc6b	ENSMUST00000226857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059668	Krt4	ENSMUST00000023797	ENSMUSP00000023797	TRANSLATION	protein_coding	-	CCDS37222.1	1	525	0	4.84	0.5	498.5	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000051879	Krt71	ENSMUST00000023710	ENSMUSP00000023710	TRANSLATION	protein_coding	-	CCDS27862.1	1	524	0	4.48	7.5	408.5	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000061527	Krt5	ENSMUST00000023709	ENSMUSP00000023709	TRANSLATION	protein_coding	-	CCDS27861.1	1	580	0	4.49	0.5	530.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041815	Poldip3	ENSMUST00000135013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041815	Poldip3	ENSMUST00000150926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041815	Poldip3	ENSMUST00000149802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041815	Poldip3	ENSMUST00000100375	ENSMUSP00000097944	TRANSLATION	protein_coding	-	CCDS84183.1	1	391	3	1.35	5.1	39.3	0	-4,-5	-	-	16.893	MINOR
ENSMUSG00000041815	Poldip3	ENSMUST00000129372	ENSMUSP00000120859	TRANSLATION	protein_coding	stop	-	2	202	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041815	Poldip3	ENSMUST00000058793	ENSMUSP00000054548	TRANSLATION	protein_coding	-	CCDS27697.1	1	420	3	1.35	7.5	39.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000116069	Gm49510	ENSMUST00000134703	ENSMUSP00000154996	TRANSLATION	protein_coding,RT	-	-	5	596	0	5.87	0	300.7	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000068114	Ccdc134	ENSMUST00000089174	ENSMUSP00000086578	TRANSLATION	protein_coding	-	CCDS37155.1	1	229	0	0	3.9	223.5	0	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000068114	Ccdc134	ENSMUST00000229456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068114	Ccdc134	ENSMUST00000230582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068114	Ccdc134	ENSMUST00000229384	ENSMUSP00000155080	TRANSLATION	nonsense_mediated_decay	-	-	-	42	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000068114	Ccdc134	ENSMUST00000229597	ENSMUSP00000155776	TRANSLATION	nonsense_mediated_decay	-	-	-	107	0	0	0	46.2	0	0,-3	-	-	-1	MINOR
ENSMUSG00000068114	Ccdc134	ENSMUST00000229788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068114	Ccdc134	ENSMUST00000229411	ENSMUSP00000155805	TRANSLATION	nonsense_mediated_decay	-	-	-	110	0	0	0	44.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000049687	Pheta2	ENSMUST00000161178	ENSMUSP00000124703	TRANSLATION	protein_coding	-	CCDS27687.1	1	259	0	0.2	2.7	43.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049687	Pheta2	ENSMUST00000159942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049687	Pheta2	ENSMUST00000050349	ENSMUSP00000060598	TRANSLATION	protein_coding	-	CCDS27687.1	1	259	0	0.2	2.7	43.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049687	Pheta2	ENSMUST00000162983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037085	Trmt12	ENSMUST00000036937	ENSMUSP00000047831	TRANSLATION	protein_coding	-	CCDS37081.1	-	446	14	0.4	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044224	Dnajc21	ENSMUST00000150878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044224	Dnajc21	ENSMUST00000146323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044224	Dnajc21	ENSMUST00000136591	ENSMUSP00000116865	TRANSLATION	protein_coding	-	CCDS49581.1	5	531	4	2.4	4.1	134.1	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000044224	Dnajc21	ENSMUST00000147224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044224	Dnajc21	ENSMUST00000145719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022580	Rhpn1	ENSMUST00000229670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022580	Rhpn1	ENSMUST00000124749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022580	Rhpn1	ENSMUST00000149407	ENSMUSP00000116837	TRANSLATION	nonsense_mediated_decay	-	-	2	451	0	3.92	0	327.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022580	Rhpn1	ENSMUST00000121137	ENSMUSP00000113042	TRANSLATION	protein_coding	-	CCDS49641.1	1	661	0	6.086	1.5	407.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022580	Rhpn1	ENSMUST00000143056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022580	Rhpn1	ENSMUST00000229182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022580	Rhpn1	ENSMUST00000023244	ENSMUSP00000023244	TRANSLATION	protein_coding	-	CCDS27548.1	1	643	0	5.986	0.5	393.1	0	-4,-5	-	-	10.914	PRINCIPAL:3
ENSMUSG00000022580	Rhpn1	ENSMUST00000229843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067713	Prkag1	ENSMUST00000230560	ENSMUSP00000155433	TRANSLATION	protein_coding	stop	-	-	215	32	5.83	0	65.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067713	Prkag1	ENSMUST00000168846	ENSMUSP00000132499	TRANSLATION	protein_coding	-	CCDS49724.1	1	330	46	8.83	7.5	106.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000067713	Prkag1	ENSMUST00000229346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067713	Prkag1	ENSMUST00000229297	ENSMUSP00000155591	TRANSLATION	protein_coding	stop	-	-	139	17	4	0	29.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067713	Prkag1	ENSMUST00000229544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067713	Prkag1	ENSMUST00000229853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022443	Myh9	ENSMUST00000016771	ENSMUSP00000016771	TRANSLATION	protein_coding	-	CCDS27605.1	1	1960	14	37.39	8.4	2737.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022443	Myh9	ENSMUST00000123101	ENSMUSP00000116198	TRANSLATION	nonsense_mediated_decay	-	-	5	120	0	1	0	73.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022443	Myh9	ENSMUST00000124844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022443	Myh9	ENSMUST00000139729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022443	Myh9	ENSMUST00000129453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022443	Myh9	ENSMUST00000231192	ENSMUSP00000155562	TRANSLATION	protein_coding	start/stop	-	-	211	0	4.66	0	211.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022443	Myh9	ENSMUST00000134878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022443	Myh9	ENSMUST00000229259	ENSMUSP00000155471	TRANSLATION	protein_coding	start/stop	-	-	110	0	2.05	0	88.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022443	Myh9	ENSMUST00000126796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047003	Zfp41	ENSMUST00000054555	ENSMUSP00000056510	TRANSLATION	protein_coding	-	CCDS37108.1	1	198	16	1.6	1.5	86.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047003	Zfp41	ENSMUST00000161752	ENSMUSP00000124887	TRANSLATION	protein_coding	stop	-	3	148	9	0.6	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047003	Zfp41	ENSMUST00000161785	ENSMUSP00000124626	TRANSLATION	protein_coding	-	CCDS37108.1	1	198	16	1.6	1.5	86.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000047003	Zfp41	ENSMUST00000161555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037204	Atg101	ENSMUST00000229525	ENSMUSP00000154849	TRANSLATION	protein_coding	stop	-	-	84	0	1	0	60.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037204	Atg101	ENSMUST00000048393	ENSMUSP00000045474	TRANSLATION	protein_coding	-	CCDS27849.1	1	218	0	2.75	16.2	141.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037204	Atg101	ENSMUST00000230525	ENSMUSP00000154855	TRANSLATION	protein_coding	stop	-	-	113	0	1.75	0	82.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095241	Gm5478	ENSMUST00000229963	ENSMUSP00000155269	TRANSLATION	protein_coding	-	-	-	535	0	4.25	0	441.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095241	Gm5478	ENSMUST00000230401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095241	Gm5478	ENSMUST00000100184	ENSMUSP00000097759	TRANSLATION	protein_coding	start/stop	-	5	159	0	2.12	0	112.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042428	Mgat3	ENSMUST00000044970	ENSMUSP00000043077	TRANSLATION	protein_coding	-	CCDS27660.1	1	538	0	0	2.7	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079020	Slc45a4	ENSMUST00000054266	ENSMUSP00000054651	TRANSLATION	protein_coding	-	-	5	793	0	0	0	27.2	19	-4,-5	-	-	4.992	ALTERNATIVE:2
ENSMUSG00000079020	Slc45a4	ENSMUST00000130765	ENSMUSP00000115418	TRANSLATION	protein_coding	stop	-	2	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079020	Slc45a4	ENSMUST00000150409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079020	Slc45a4	ENSMUST00000132607	ENSMUSP00000115827	TRANSLATION	protein_coding	-	CCDS49632.1	1	591	0	0	0.5	0	14	-4,-7	-	-	0	MINOR
ENSMUSG00000079020	Slc45a4	ENSMUST00000144936	ENSMUSP00000122825	TRANSLATION	protein_coding	start	-	1	721	0	0	0	0	19	-4,-6	-	-	-1	MINOR
ENSMUSG00000079020	Slc45a4	ENSMUST00000076224	ENSMUSP00000075577	TRANSLATION	protein_coding	-	CCDS27517.1	1	785	0	0	1.5	32.7	19	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000079020	Slc45a4	ENSMUST00000151288	ENSMUSP00000121775	TRANSLATION	protein_coding	-	CCDS27517.1	1	785	0	0	1.5	32.7	19	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000079020	Slc45a4	ENSMUST00000152558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022364	Tbc1d31	ENSMUST00000022992	ENSMUSP00000022992	TRANSLATION	protein_coding	-	CCDS37077.2	1	996	0	3.46	0.5	35.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022364	Tbc1d31	ENSMUST00000160098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022364	Tbc1d31	ENSMUST00000110175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022364	Tbc1d31	ENSMUST00000161329	ENSMUSP00000124466	TRANSLATION	protein_coding	start	-	5	234	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022364	Tbc1d31	ENSMUST00000159775	ENSMUSP00000124243	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022364	Tbc1d31	ENSMUST00000159801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022364	Tbc1d31	ENSMUST00000162157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022415	Syngr1	ENSMUST00000009728	ENSMUSP00000009728	TRANSLATION	protein_coding	-	CCDS27658.1	1	191	0	0	7.6	108.7	6	-4,-7	-	-	8.838	ALTERNATIVE:1
ENSMUSG00000022415	Syngr1	ENSMUST00000143928	ENSMUSP00000120696	TRANSLATION	protein_coding	stop	-	3	111	0	0	0	77.2	4	-2,-5	-	-	-1	MINOR
ENSMUSG00000022415	Syngr1	ENSMUST00000135727	ENSMUSP00000121716	TRANSLATION	protein_coding	start	-	3	128	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022415	Syngr1	ENSMUST00000009727	ENSMUSP00000009727	TRANSLATION	protein_coding	-	CCDS27657.1	1	234	0	0	5.2	111.4	6	-4,-7	-	-	7.908	PRINCIPAL:4
ENSMUSG00000022432	Smc1b	ENSMUST00000023068	ENSMUSP00000023068	TRANSLATION	protein_coding	-	CCDS27718.1	1	1248	7	10.93	1.5	279.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022432	Smc1b	ENSMUST00000227591	ENSMUSP00000154461	TRANSLATION	nonsense_mediated_decay	start	-	-	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000228054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000227044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000226580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000226775	ENSMUSP00000154608	TRANSLATION	protein_coding	stop	-	-	178	0	0	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000228950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000226117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000227030	ENSMUSP00000153890	TRANSLATION	nonsense_mediated_decay	start	-	-	67	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000226644	ENSMUSP00000154309	TRANSLATION	protein_coding	start	-	-	1424	0	18.53	0	869.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000227642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022263	Trio	ENSMUST00000090247	ENSMUSP00000087714	TRANSLATION	protein_coding	-	CCDS49587.1	5	3103	17	25.99	1.5	1294.1	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022263	Trio	ENSMUST00000226287	ENSMUSP00000154458	TRANSLATION	protein_coding	stop	-	-	132	0	0	0	167.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000226713	ENSMUSP00000154789	TRANSLATION	protein_coding	start/stop	-	-	184	0	3.01	0	76.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000227999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022263	Trio	ENSMUST00000227337	ENSMUSP00000154653	TRANSLATION	protein_coding	-	-	-	1849	0	11.42	0	719.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022263	Trio	ENSMUST00000228084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022372	Sla	ENSMUST00000168522	ENSMUSP00000131865	TRANSLATION	protein_coding	-	CCDS49622.1	1	297	0	4.25	0.5	94.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022372	Sla	ENSMUST00000168589	ENSMUSP00000130222	TRANSLATION	protein_coding	-	CCDS27509.1	1	281	0	4.25	0.5	94.5	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000022372	Sla	ENSMUST00000164163	ENSMUSP00000127901	TRANSLATION	protein_coding	-	CCDS27509.1	5	281	0	4.25	0.5	94.5	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000022372	Sla	ENSMUST00000164939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022372	Sla	ENSMUST00000100572	ENSMUSP00000098138	TRANSLATION	protein_coding	-	CCDS27509.1	1	281	0	4.25	0.5	94.5	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000037075	Rnf139	ENSMUST00000226908	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037075	Rnf139	ENSMUST00000036904	ENSMUSP00000046467	TRANSLATION	protein_coding	-	CCDS27494.1	1	668	8	0	6.5	646.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000048385	Scrt1	ENSMUST00000096365	ENSMUSP00000094093	TRANSLATION	protein_coding	-	CCDS37123.1	1	348	19	0.6	3.9	105.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000048385	Scrt1	ENSMUST00000164703	ENSMUSP00000131152	TRANSLATION	protein_coding	-	CCDS37123.1	2	348	19	0.6	3.9	105.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000025370	Cdh9	ENSMUST00000228307	ENSMUSP00000154022	TRANSLATION	protein_coding	-	CCDS49584.1	-	788	48	8.58	1.5	435.5	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025370	Cdh9	ENSMUST00000026432	ENSMUSP00000026432	TRANSLATION	protein_coding	-	CCDS49584.1	5	788	48	8.58	1.5	435.5	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068349	Gml	ENSMUST00000185253	ENSMUSP00000140245	TRANSLATION	protein_coding	stop	-	2	107	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000068349	Gml	ENSMUST00000096400	ENSMUSP00000094131	TRANSLATION	protein_coding	-	CCDS49637.1	1	176	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000068349	Gml	ENSMUST00000164026	ENSMUSP00000128174	TRANSLATION	protein_coding	-	CCDS49637.1	2	176	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000023755	Rhebl1	ENSMUST00000229352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023755	Rhebl1	ENSMUST00000155699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023755	Rhebl1	ENSMUST00000024518	ENSMUSP00000024518	TRANSLATION	protein_coding	-	CCDS27809.1	1	184	25	5.38	9.5	147.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000023755	Rhebl1	ENSMUST00000147015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023755	Rhebl1	ENSMUST00000229556	ENSMUSP00000155126	TRANSLATION	protein_coding	stop	-	-	154	25	4.58	1	139.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023755	Rhebl1	ENSMUST00000229348	ENSMUSP00000155216	TRANSLATION	protein_coding	-	-	-	188	24	5.38	1.7	137.5	0	-4,-7	-	-	16.962	MINOR
ENSMUSG00000023755	Rhebl1	ENSMUST00000230623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023755	Rhebl1	ENSMUST00000229876	ENSMUSP00000155149	TRANSLATION	protein_coding	-	-	-	156	25	4.329	0	110	0	-4,-7	-	-	13.632	MINOR
ENSMUSG00000023755	Rhebl1	ENSMUST00000229508	ENSMUSP00000155010	TRANSLATION	protein_coding	stop	-	-	151	25	4.58	0	136.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022335	Zfat	ENSMUST00000161139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022335	Zfat	ENSMUST00000160248	ENSMUSP00000125257	TRANSLATION	protein_coding	-	CCDS49623.1	1	1237	69	5	1.5	139.7	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000022335	Zfat	ENSMUST00000162054	ENSMUSP00000125732	TRANSLATION	protein_coding	-	CCDS49624.1	1	1219	69	5	1.5	139.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022335	Zfat	ENSMUST00000162173	ENSMUSP00000124974	TRANSLATION	protein_coding	-	-	5	1152	69	5	0	139.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022335	Zfat	ENSMUST00000159430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067613	Krt83	ENSMUST00000023718	ENSMUSP00000023718	TRANSLATION	protein_coding	-	CCDS49735.1	1	479	0	5	1.5	368.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000067613	Krt83	ENSMUST00000159029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000147020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000175778	ENSMUSP00000135351	TRANSLATION	protein_coding	start	-	5	415	8	4.79	0	165.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036529	Sbf1	ENSMUST00000124642	ENSMUSP00000119943	TRANSLATION	nonsense_mediated_decay	start	-	3	176	0	0	0	112.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036529	Sbf1	ENSMUST00000150539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000176277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000176028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000146637	ENSMUSP00000122386	TRANSLATION	protein_coding	start/stop	-	5	257	0	2.36	0	162	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036529	Sbf1	ENSMUST00000155146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000124398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000123791	ENSMUSP00000120725	TRANSLATION	protein_coding	-	CCDS37175.2	1	1867	8	10.875	1.5	1001.2	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000036529	Sbf1	ENSMUST00000144585	ENSMUSP00000118107	TRANSLATION	protein_coding	-	CCDS49699.1	1	1893	8	10.875	1.5	999.7	0	-4,-7	-	-	17.91	ALTERNATIVE:2
ENSMUSG00000036529	Sbf1	ENSMUST00000177388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036529	Sbf1	ENSMUST00000124576	ENSMUSP00000115740	TRANSLATION	nonsense_mediated_decay	-	-	1	403	0	3.19	0	243.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068085	Cyp2d11	ENSMUST00000170255	ENSMUSP00000130338	TRANSLATION	protein_coding	-	CCDS49680.1	5	504	30	8.6	1.5	462.4	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041653	Pnpla3	ENSMUST00000045289	ENSMUSP00000043826	TRANSLATION	protein_coding	-	CCDS37165.1	5	384	0	0	0.5	54.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041653	Pnpla3	ENSMUST00000230926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000162354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000161499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022555	Dgat1	ENSMUST00000230722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000231035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022555	Dgat1	ENSMUST00000160293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000160294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022555	Dgat1	ENSMUST00000023214	ENSMUSP00000023214	TRANSLATION	protein_coding	-	CCDS27573.1	1	498	0	0	1.5	206.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000022555	Dgat1	ENSMUST00000159776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022555	Dgat1	ENSMUST00000230894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000229569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022555	Dgat1	ENSMUST00000162813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022555	Dgat1	ENSMUST00000159908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022996	Wnt10b	ENSMUST00000226610	ENSMUSP00000153817	TRANSLATION	protein_coding	-	CCDS27806.1	-	389	0	2.478	2.7	373.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022996	Wnt10b	ENSMUST00000228594	ENSMUSP00000153930	TRANSLATION	protein_coding	-	CCDS27806.1	-	389	0	2.478	2.7	373.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022996	Wnt10b	ENSMUST00000166022	ENSMUSP00000131056	TRANSLATION	protein_coding	-	CCDS27806.1	1	389	0	2.478	2.7	373.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022996	Wnt10b	ENSMUST00000023732	ENSMUSP00000023732	TRANSLATION	protein_coding	-	CCDS27806.1	5	389	0	2.478	2.7	373.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022996	Wnt10b	ENSMUST00000226655	ENSMUSP00000154384	TRANSLATION	protein_coding	-	-	-	173	0	1.398	0	94.8	0	1,-3	-	-	3.384	MINOR
ENSMUSG00000022996	Wnt10b	ENSMUST00000226846	ENSMUSP00000154513	TRANSLATION	protein_coding	-	-	-	293	0	1.464	0.5	198.5	0	1,-3	-	-	3.546	MINOR
ENSMUSG00000022996	Wnt10b	ENSMUST00000228546	ENSMUSP00000154394	TRANSLATION	protein_coding	-	-	-	171	0	0.88	0	198.5	0	-4,-7	-	-	2.13	MINOR
ENSMUSG00000062397	Zfp706	ENSMUST00000078976	ENSMUSP00000077996	TRANSLATION	protein_coding	-	CCDS37063.1	1	76	3	0	20.5	64.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062397	Zfp706	ENSMUST00000226671	ENSMUSP00000154192	TRANSLATION	protein_coding	-	CCDS37063.1	-	76	3	0	20.5	64.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062397	Zfp706	ENSMUST00000228275	ENSMUSP00000154243	TRANSLATION	protein_coding	-	CCDS37063.1	-	76	3	0	20.5	64.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062397	Zfp706	ENSMUST00000226453	ENSMUSP00000154190	TRANSLATION	protein_coding	-	CCDS37063.1	-	76	3	0	20.5	64.8	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000062397	Zfp706	ENSMUST00000226257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022394	L3mbtl2	ENSMUST00000173761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022394	L3mbtl2	ENSMUST00000173105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022394	L3mbtl2	ENSMUST00000174401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022394	L3mbtl2	ENSMUST00000174229	ENSMUSP00000133967	TRANSLATION	protein_coding	-	CCDS79394.1	1	739	3	10.35	0.5	321.9	0	-4,-5	-	-	15	MINOR
ENSMUSG00000022394	L3mbtl2	ENSMUST00000172748	ENSMUSP00000134333	TRANSLATION	protein_coding	-	CCDS79395.1	1	713	3	10.35	0.5	321.9	0	-4,-5	-	-	15	MINOR
ENSMUSG00000022394	L3mbtl2	ENSMUST00000172568	ENSMUSP00000155456	TRANSLATION	nonsense_mediated_decay	-	-	1	393	3	5.7	0	144.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022394	L3mbtl2	ENSMUST00000174274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022394	L3mbtl2	ENSMUST00000023029	ENSMUSP00000023029	TRANSLATION	protein_coding	-	CCDS27669.1	1	703	3	10.35	5.1	321.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022394	L3mbtl2	ENSMUST00000173607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022394	L3mbtl2	ENSMUST00000172620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022394	L3mbtl2	ENSMUST00000174497	ENSMUSP00000133549	TRANSLATION	protein_coding	start	-	3	138	0	2.9	0	73.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023019	Gpd1	ENSMUST00000162194	ENSMUSP00000125164	TRANSLATION	protein_coding	-	-	5	326	28	7.25	1.2	237.8	0	-4,-7	-	-	8.559	MINOR
ENSMUSG00000023019	Gpd1	ENSMUST00000161768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023019	Gpd1	ENSMUST00000023760	ENSMUSP00000023760	TRANSLATION	protein_coding	-	CCDS27828.1	1	349	31	8	11.5	354.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000015001	Oc90	ENSMUST00000156996	ENSMUSP00000121227	TRANSLATION	protein_coding	start	-	1	454	3	4.13	0	179.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015001	Oc90	ENSMUST00000135442	ENSMUSP00000114254	TRANSLATION	protein_coding	start/stop	-	3	299	3	3.16	0	90.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015001	Oc90	ENSMUST00000060522	ENSMUSP00000062865	TRANSLATION	protein_coding	-	CCDS27508.1	1	485	3	4.13	0.5	179.4	0	3,-2	-	-	15	PRINCIPAL:3
ENSMUSG00000015001	Oc90	ENSMUST00000147776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015001	Oc90	ENSMUST00000079776	ENSMUSP00000078709	TRANSLATION	protein_coding	-	CCDS84171.1	1	453	3	4.13	0.5	179.4	0	3,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000093550	Higd1c	ENSMUST00000175683	ENSMUSP00000134927	TRANSLATION	protein_coding	-	CCDS37210.1	3	96	0	2.25	3.9	60.5	2	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000093550	Higd1c	ENSMUST00000177211	ENSMUSP00000134848	TRANSLATION	protein_coding	-	CCDS37210.1	1	96	0	2.25	3.9	60.5	2	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000067614	Krt86	ENSMUST00000088049	ENSMUSP00000085365	TRANSLATION	protein_coding	-	CCDS37218.1	1	486	0	5	6.3	367.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000058354	Krt6a	ENSMUST00000230205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058354	Krt6a	ENSMUST00000023788	ENSMUSP00000023788	TRANSLATION	protein_coding	-	CCDS27860.1	1	553	0	4.69	0.5	503.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053411	Cbx7	ENSMUST00000089293	ENSMUSP00000086708	TRANSLATION	protein_coding	-	-	1	251	0	4.112	6.3	102.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000053411	Cbx7	ENSMUST00000176639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053411	Cbx7	ENSMUST00000177044	ENSMUSP00000135246	TRANSLATION	protein_coding	stop	-	5	121	0	2	0	32.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053411	Cbx7	ENSMUST00000177061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053411	Cbx7	ENSMUST00000128931	ENSMUSP00000118813	TRANSLATION	protein_coding	stop	-	5	106	0	1.23	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053411	Cbx7	ENSMUST00000132821	ENSMUSP00000118871	TRANSLATION	protein_coding	stop	-	5	61	0	1.23	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053411	Cbx7	ENSMUST00000109616	ENSMUSP00000105245	TRANSLATION	protein_coding	-	CCDS37143.1	1	158	0	4.112	6.3	102.4	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000053411	Cbx7	ENSMUST00000146719	ENSMUSP00000120748	TRANSLATION	protein_coding	start	-	3	180	0	3.362	0	91.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053411	Cbx7	ENSMUST00000109615	ENSMUSP00000105244	TRANSLATION	protein_coding	-	CCDS37143.1	1	158	0	4.112	6.3	102.4	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000022403	St13	ENSMUST00000169204	ENSMUSP00000130525	TRANSLATION	protein_coding	stop	-	1	17	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022403	St13	ENSMUST00000023039	ENSMUSP00000023039	TRANSLATION	protein_coding	-	-	5	362	0	8.58	1.2	0	0	-4,-6	-	-	6.093	MINOR
ENSMUSG00000022403	St13	ENSMUST00000165582	ENSMUSP00000129966	TRANSLATION	protein_coding	stop	-	5	129	0	2.98	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022403	St13	ENSMUST00000230906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022403	St13	ENSMUST00000229847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022403	St13	ENSMUST00000172107	ENSMUSP00000130195	TRANSLATION	protein_coding	-	CCDS27667.1	1	371	0	8.58	7.5	0	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000022403	St13	ENSMUST00000163382	ENSMUSP00000131502	TRANSLATION	protein_coding	stop	-	5	79	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022615	Tymp	ENSMUST00000023285	ENSMUSP00000023285	TRANSLATION	protein_coding,RT	-	CCDS27747.1	1	471	22	8.6	0.5	229.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000033170	Card10	ENSMUST00000164826	ENSMUSP00000129513	TRANSLATION	protein_coding	-	CCDS27623.2	1	1070	0	4.64	0.5	72.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000033170	Card10	ENSMUST00000170584	ENSMUSP00000131003	TRANSLATION	protein_coding	-	-	5	1021	0	4.64	0	72.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033170	Card10	ENSMUST00000071115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022416	Cacna1i	ENSMUST00000161863	ENSMUSP00000124367	TRANSLATION	protein_coding	start/stop	-	5	132	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022416	Cacna1i	ENSMUST00000162155	ENSMUSP00000125229	TRANSLATION	nonsense_mediated_decay	-	-	5	1835	0	12.33	0	865.7	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000022416	Cacna1i	ENSMUST00000160424	ENSMUSP00000125063	TRANSLATION	protein_coding	-	CCDS49670.1	1	2199	0	12.33	0.5	865.7	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022416	Cacna1i	ENSMUST00000160175	ENSMUSP00000123881	TRANSLATION	protein_coding	start/stop	-	5	260	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022416	Cacna1i	ENSMUST00000162025	ENSMUSP00000125530	TRANSLATION	protein_coding	start/stop	-	5	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022416	Cacna1i	ENSMUST00000162913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036106	Prr5	ENSMUST00000065499	ENSMUSP00000066396	TRANSLATION	protein_coding	-	CCDS27711.1	1	387	0	0	3.9	0	0	-4,-2	-	-	1	PRINCIPAL:3
ENSMUSG00000036106	Prr5	ENSMUST00000171460	ENSMUSP00000127890	TRANSLATION	protein_coding	-	CCDS84185.1	1	378	0	0	3.9	0	0	-4,-5	-	-	1	ALTERNATIVE:2
ENSMUSG00000054967	Zfp647	ENSMUST00000229865	ENSMUSP00000155272	TRANSLATION	protein_coding	stop	-	-	157	0	1.35	0	75.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054967	Zfp647	ENSMUST00000048854	ENSMUSP00000041575	TRANSLATION	protein_coding	-	CCDS27596.1	1	535	52	1.95	1.5	359.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000054967	Zfp647	ENSMUST00000229055	ENSMUSP00000155685	TRANSLATION	protein_coding	-	CCDS27596.1	-	535	52	1.95	1.5	359.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000054967	Zfp647	ENSMUST00000230677	ENSMUSP00000155660	TRANSLATION	protein_coding	stop	-	-	37	0	0.6	0	33.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047034	Ankrd33	ENSMUST00000070875	ENSMUSP00000067028	TRANSLATION	protein_coding	-	CCDS27845.1	1	337	0	2.761	0.5	53.8	0	-4,-7	-	-	10.332	PRINCIPAL:2
ENSMUSG00000047034	Ankrd33	ENSMUST00000229930	ENSMUSP00000155211	TRANSLATION	nonsense_mediated_decay	-	-	-	79	0	0.9	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000047034	Ankrd33	ENSMUST00000229263	ENSMUSP00000155792	TRANSLATION	nonsense_mediated_decay	-	-	-	79	0	0.9	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000047034	Ankrd33	ENSMUST00000229842	ENSMUSP00000155417	TRANSLATION	protein_coding	stop	-	-	107	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047034	Ankrd33	ENSMUST00000231208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047034	Ankrd33	ENSMUST00000231158	ENSMUSP00000155466	TRANSLATION	protein_coding	stop	-	-	113	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047034	Ankrd33	ENSMUST00000229954	ENSMUSP00000155584	TRANSLATION	protein_coding	-	-	-	385	0	3.595	0	46.5	0	-4,-5	-	-	11.184	ALTERNATIVE:2
ENSMUSG00000022992	Kansl2	ENSMUST00000023727	ENSMUSP00000023727	TRANSLATION	protein_coding	-	-	5	452	0	0	0.5	114.6	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000022992	Kansl2	ENSMUST00000231066	ENSMUSP00000155461	TRANSLATION	nonsense_mediated_decay	-	-	-	157	0	0	0	63.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022992	Kansl2	ENSMUST00000229818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022992	Kansl2	ENSMUST00000230542	ENSMUSP00000155089	TRANSLATION	protein_coding	-	CCDS37190.1	-	486	0	0	1.5	114.6	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000022992	Kansl2	ENSMUST00000116400	ENSMUSP00000112101	TRANSLATION	protein_coding	-	-	1	452	0	0	0.5	114.6	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000003360	Ddx23	ENSMUST00000159170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003360	Ddx23	ENSMUST00000228973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003360	Ddx23	ENSMUST00000162384	ENSMUSP00000125168	TRANSLATION	protein_coding	stop	-	5	80	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003360	Ddx23	ENSMUST00000159423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003360	Ddx23	ENSMUST00000003450	ENSMUSP00000003450	TRANSLATION	protein_coding	-	CCDS37193.1	5	819	13	15.83	8.8	285.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003360	Ddx23	ENSMUST00000160506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003360	Ddx23	ENSMUST00000161030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048175	Asb8	ENSMUST00000123922	ENSMUSP00000119481	TRANSLATION	protein_coding	-	CCDS27787.1	3	288	0	2.2	10	137.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000048175	Asb8	ENSMUST00000059112	ENSMUSP00000057864	TRANSLATION	protein_coding	-	CCDS27787.1	1	288	0	2.2	10	137.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000048175	Asb8	ENSMUST00000123626	ENSMUSP00000121383	TRANSLATION	protein_coding	-	CCDS27787.1	1	288	0	2.2	10	137.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000048175	Asb8	ENSMUST00000143400	ENSMUSP00000115813	TRANSLATION	protein_coding	-	CCDS27787.1	1	288	0	2.2	10	137.9	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000036966	Spryd3	ENSMUST00000154032	ENSMUSP00000121493	TRANSLATION	protein_coding	-	CCDS49738.1	5	442	0	6.54	7.5	81.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000036966	Spryd3	ENSMUST00000156475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036966	Spryd3	ENSMUST00000139279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036966	Spryd3	ENSMUST00000128884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022598	Psca	ENSMUST00000023265	ENSMUSP00000023265	TRANSLATION	protein_coding	-	CCDS27526.1	1	123	0	0.88	0.5	43.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000045267	Tas2r119	ENSMUST00000057633	ENSMUSP00000050277	TRANSLATION	protein_coding	-	CCDS49590.1	-	334	0	0	1.5	297.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000048546	Tob2	ENSMUST00000231000	ENSMUSP00000155503	TRANSLATION	protein_coding	stop	-	-	44	0	1	0	43.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048546	Tob2	ENSMUST00000050467	ENSMUSP00000061390	TRANSLATION	protein_coding	-	CCDS27673.1	1	345	0	1.5	3.9	167.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000048546	Tob2	ENSMUST00000230448	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048546	Tob2	ENSMUST00000229500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022148	Fyb	ENSMUST00000162430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022148	Fyb	ENSMUST00000226412	ENSMUSP00000154585	TRANSLATION	protein_coding	stop	-	-	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022148	Fyb	ENSMUST00000161947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022148	Fyb	ENSMUST00000160612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022148	Fyb	ENSMUST00000159604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022148	Fyb	ENSMUST00000159714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022148	Fyb	ENSMUST00000090461	ENSMUSP00000087947	TRANSLATION	protein_coding	-	CCDS37031.1	1	819	0	3.86	1.5	183.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022148	Fyb	ENSMUST00000163073	ENSMUSP00000123895	TRANSLATION	protein_coding	start	-	3	183	0	2.06	0	131.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022148	Fyb	ENSMUST00000227175	ENSMUSP00000153970	TRANSLATION	protein_coding	stop	-	-	105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022148	Fyb	ENSMUST00000162154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109179	Gm35339	ENSMUST00000208833	ENSMUSP00000146420	TRANSLATION	protein_coding	-	-	5	1664	0	2.36	0.5	36.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023015	Racgap1	ENSMUST00000109581	ENSMUSP00000105209	TRANSLATION	protein_coding	stop	-	5	35	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000023756	ENSMUSP00000023756	TRANSLATION	protein_coding	-	CCDS27825.1	1	628	7	6.6	1.5	177.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023015	Racgap1	ENSMUST00000171702	ENSMUSP00000126417	TRANSLATION	protein_coding	-	CCDS27825.1	1	628	7	6.6	1.5	177.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023015	Racgap1	ENSMUST00000169810	ENSMUSP00000130876	TRANSLATION	protein_coding	stop	-	3	229	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000165730	ENSMUSP00000130282	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000171908	ENSMUSP00000128892	TRANSLATION	protein_coding	stop	-	3	131	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000171017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023015	Racgap1	ENSMUST00000165745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023015	Racgap1	ENSMUST00000168976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023015	Racgap1	ENSMUST00000168065	ENSMUSP00000132732	TRANSLATION	nonsense_mediated_decay	start	-	5	151	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000169700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023015	Racgap1	ENSMUST00000164983	ENSMUSP00000132471	TRANSLATION	nonsense_mediated_decay	-	-	3	72	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023015	Racgap1	ENSMUST00000170369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023015	Racgap1	ENSMUST00000168834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016637	Ift27	ENSMUST00000231069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016637	Ift27	ENSMUST00000229417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016637	Ift27	ENSMUST00000016781	ENSMUSP00000016781	TRANSLATION	protein_coding	-	CCDS37131.1	1	186	22	5.4888	13.6	123.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000016637	Ift27	ENSMUST00000230844	ENSMUSP00000155127	TRANSLATION	protein_coding	-	-	-	163	15	4.7588	2	102.2	0	-4,-5	-	-	10.888	MINOR
ENSMUSG00000016637	Ift27	ENSMUST00000229476	ENSMUSP00000155736	TRANSLATION	protein_coding	stop	-	-	99	15	3.33	0	73.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015002	Efr3a	ENSMUST00000211878	ENSMUSP00000148418	TRANSLATION	protein_coding	-	-	5	846	0	1.045	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000015002	Efr3a	ENSMUST00000172756	ENSMUSP00000134683	TRANSLATION	protein_coding	-	-	1	174	0	1.045	0	0	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000015002	Efr3a	ENSMUST00000015146	ENSMUSP00000015146	TRANSLATION	protein_coding	-	CCDS27507.1	1	819	0	1.045	3.9	0	0	-4,-2	-	-	7	PRINCIPAL:2
ENSMUSG00000015002	Efr3a	ENSMUST00000173936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015002	Efr3a	ENSMUST00000096411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015002	Efr3a	ENSMUST00000173008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015002	Efr3a	ENSMUST00000174135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015002	Efr3a	ENSMUST00000174615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015002	Efr3a	ENSMUST00000174601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015002	Efr3a	ENSMUST00000174591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015002	Efr3a	ENSMUST00000174856	ENSMUSP00000133493	TRANSLATION	protein_coding	stop	-	2	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015002	Efr3a	ENSMUST00000174749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015002	Efr3a	ENSMUST00000173858	ENSMUSP00000134385	TRANSLATION	protein_coding	-	-	1	821	0	1.045	0	0	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000015002	Efr3a	ENSMUST00000227340	ENSMUSP00000154465	TRANSLATION	protein_coding	start	-	-	112	0	0	0	0	0	-2,-2	-	-	-1	MINOR
ENSMUSG00000034259	Exosc4	ENSMUST00000230512	ENSMUSP00000155254	TRANSLATION	nonsense_mediated_decay	-	-	-	68	0	1.066	0	42.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034259	Exosc4	ENSMUST00000059045	ENSMUSP00000050940	TRANSLATION	protein_coding	-	CCDS37119.1	1	245	5	3.33	13	152.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000034259	Exosc4	ENSMUST00000167515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016619	Nup50	ENSMUST00000165443	ENSMUSP00000131457	TRANSLATION	protein_coding	-	CCDS27714.1	1	466	0	5.25	1.5	111	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000016619	Nup50	ENSMUST00000230411	ENSMUSP00000155656	TRANSLATION	protein_coding	-	CCDS27714.1	-	466	0	5.25	1.5	111	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022462	Slc38a2	ENSMUST00000229141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022462	Slc38a2	ENSMUST00000023099	ENSMUSP00000023099	TRANSLATION	protein_coding	-	CCDS27778.1	1	504	0	0	2.7	249.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037280	Galnt6	ENSMUST00000161514	ENSMUSP00000124793	TRANSLATION	protein_coding	-	CCDS27843.1	1	622	23	7.14	7.5	202.9	0	-1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000037280	Galnt6	ENSMUST00000052069	ENSMUSP00000056705	TRANSLATION	protein_coding	-	CCDS27843.1	1	622	23	7.14	7.5	202.9	0	-1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000037280	Galnt6	ENSMUST00000159715	ENSMUSP00000123848	TRANSLATION	protein_coding	-	CCDS27843.1	1	622	23	7.14	7.5	202.9	0	-1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000022484	Hoxc10	ENSMUST00000001699	ENSMUSP00000001699	TRANSLATION	protein_coding	-	CCDS57014.1	1	342	0	1	7.5	72.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000056258	Kcnq3	ENSMUST00000183633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056258	Kcnq3	ENSMUST00000070256	ENSMUSP00000063380	TRANSLATION	protein_coding	-	CCDS49619.1	1	873	0	5.84	0.5	514.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056258	Kcnq3	ENSMUST00000183354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054036	Olfr279	ENSMUST00000216822	ENSMUSP00000150851	TRANSLATION	protein_coding	-	CCDS27796.1	5	310	0	0.2	0.5	169.7	3	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054036	Olfr279	ENSMUST00000205772	ENSMUSP00000145811	TRANSLATION	protein_coding	-	CCDS27796.1	3	310	0	0.2	0.5	169.7	3	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054036	Olfr279	ENSMUST00000050451	ENSMUSP00000061693	TRANSLATION	protein_coding	-	CCDS27796.1	-	310	0	0.2	0.5	169.7	3	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091694	Apol11b	ENSMUST00000180949	ENSMUSP00000137890	TRANSLATION	protein_coding	-	CCDS49662.1	1	337	0	0	0.5	251.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091694	Apol11b	ENSMUST00000166623	ENSMUSP00000129476	TRANSLATION	protein_coding	-	CCDS49662.1	3	337	0	0	0.5	251.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091694	Apol11b	ENSMUST00000181467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091694	Apol11b	ENSMUST00000181154	ENSMUSP00000137798	TRANSLATION	protein_coding	stop	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000231867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000209939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000232355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000209244	ENSMUSP00000147447	TRANSLATION	protein_coding	-	CCDS84169.1	5	4249	0	3.5	0.5	943.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000166957	ENSMUSP00000129522	TRANSLATION	protein_coding	stop	-	5	4249	0	3.5	0.5	943.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000038725	Pkhd1l1	ENSMUST00000038336	ENSMUSP00000036988	TRANSLATION	protein_coding	stop	-	1	4247	0	3.5	0.5	943.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000037119	Fam91a1	ENSMUST00000228576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037119	Fam91a1	ENSMUST00000227770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037119	Fam91a1	ENSMUST00000037270	ENSMUSP00000036524	TRANSLATION	protein_coding	-	CCDS37080.1	1	837	0	0	8.8	1078.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000037119	Fam91a1	ENSMUST00000227796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023031	Cela1	ENSMUST00000229869	ENSMUSP00000154894	TRANSLATION	protein_coding	-	-	-	46	0	1	0	21.4	0	-4,-2	-	-	0	MINOR
ENSMUSG00000023031	Cela1	ENSMUST00000023775	ENSMUSP00000023775	TRANSLATION	protein_coding	-	CCDS37213.1	1	266	14	6.93	5.1	230.1	0	3,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000023031	Cela1	ENSMUST00000229235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023031	Cela1	ENSMUST00000230312	ENSMUSP00000155222	TRANSLATION	protein_coding	start	-	-	154	10	4	0	139.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023031	Cela1	ENSMUST00000230740	ENSMUSP00000155197	TRANSLATION	protein_coding	-	-	-	69	4	1.83	0	56.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023031	Cela1	ENSMUST00000230642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023031	Cela1	ENSMUST00000230572	ENSMUSP00000155576	TRANSLATION	protein_coding	-	-	-	69	4	1.83	0	56.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023031	Cela1	ENSMUST00000229888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023031	Cela1	ENSMUST00000230744	ENSMUSP00000155165	TRANSLATION	protein_coding	-	-	-	46	0	1	0	21.4	0	-4,-2	-	-	0	MINOR
ENSMUSG00000009035	Tmem184b	ENSMUST00000229049	ENSMUSP00000155214	TRANSLATION	protein_coding	stop	-	-	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009035	Tmem184b	ENSMUST00000228002	ENSMUSP00000154210	TRANSLATION	protein_coding	-	-	-	414	0	0	7.5	313.1	8	-4,-7	-	-	9	ALTERNATIVE:1
ENSMUSG00000009035	Tmem184b	ENSMUST00000074991	ENSMUSP00000074518	TRANSLATION	protein_coding	-	CCDS27639.1	1	407	0	0	7.5	313.1	8	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000009035	Tmem184b	ENSMUST00000226929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009035	Tmem184b	ENSMUST00000228472	ENSMUSP00000154053	TRANSLATION	protein_coding	stop	-	-	120	0	0	0	89.6	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000009035	Tmem184b	ENSMUST00000229003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009035	Tmem184b	ENSMUST00000178522	ENSMUSP00000136416	TRANSLATION	protein_coding	-	CCDS27639.1	1	407	0	0	7.5	313.1	8	-4,-7	-	-	9	PRINCIPAL:2
ENSMUSG00000009035	Tmem184b	ENSMUST00000231076	ENSMUSP00000155585	TRANSLATION	protein_coding	stop	-	-	222	0	0	0	183.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000054409	Tmem74	ENSMUST00000067469	ENSMUSP00000070748	TRANSLATION	protein_coding	-	CCDS27454.1	1	305	0	0	1.5	35.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034161	Scx	ENSMUST00000043089	ENSMUSP00000043668	TRANSLATION	protein_coding	-	CCDS27571.1	1	207	0	0.4	2.7	64.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034161	Scx	ENSMUST00000229271	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050697	Prkaa1	ENSMUST00000228218	ENSMUSP00000154562	TRANSLATION	protein_coding	-	-	-	550	18	8.75	1.2	250	0	-4,-5	-	-	17.421	MINOR
ENSMUSG00000050697	Prkaa1	ENSMUST00000051186	ENSMUSP00000063166	TRANSLATION	protein_coding	-	CCDS49574.1	1	559	18	9.08	8.4	250	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000061923	Odf1	ENSMUST00000081966	ENSMUSP00000080632	TRANSLATION	protein_coding	-	CCDS49596.1	1	248	0	0.32	1.5	24.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022986	Krt75	ENSMUST00000042957	ENSMUSP00000036246	TRANSLATION	protein_coding	-	CCDS27856.1	1	551	0	4.69	1.7	496.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000022270	Retreg1	ENSMUST00000110438	ENSMUSP00000106068	TRANSLATION	protein_coding	-	CCDS37051.1	1	356	0	0	7.6	0	3	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000022270	Retreg1	ENSMUST00000228600	ENSMUSP00000154407	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000022270	Retreg1	ENSMUST00000227275	ENSMUSP00000154471	TRANSLATION	protein_coding	-	CCDS37051.1	-	356	0	0	7.6	0	3	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000022270	Retreg1	ENSMUST00000226438	ENSMUSP00000154765	TRANSLATION	protein_coding	-	-	-	364	0	0	0.5	0	3	-1,-4	-	-	0	MINOR
ENSMUSG00000022270	Retreg1	ENSMUST00000022881	ENSMUSP00000022881	TRANSLATION	protein_coding	-	CCDS37050.1	5	480	0	0	1.5	0	4	-4,-5	-	-	0.228	MINOR
ENSMUSG00000022270	Retreg1	ENSMUST00000228327	ENSMUSP00000154377	TRANSLATION	protein_coding	stop	-	-	145	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000022270	Retreg1	ENSMUST00000228306	ENSMUSP00000154070	TRANSLATION	protein_coding	-	-	-	346	0	0	0.5	0	3	-4,-7	-	-	0	MINOR
ENSMUSG00000022270	Retreg1	ENSMUST00000226750	ENSMUSP00000154791	TRANSLATION	protein_coding	stop	-	-	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023034	Nr4a1	ENSMUST00000231153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023034	Nr4a1	ENSMUST00000023779	ENSMUSP00000023779	TRANSLATION	protein_coding	-	CCDS27848.1	1	601	8	5.24	0.5	211.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000023034	Nr4a1	ENSMUST00000228985	ENSMUSP00000155225	TRANSLATION	protein_coding	-	CCDS27848.1	-	601	8	5.24	0.5	211.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000023034	Nr4a1	ENSMUST00000230814	ENSMUSP00000155056	TRANSLATION	protein_coding	stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063704	Mapk15	ENSMUST00000160637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063704	Mapk15	ENSMUST00000089669	ENSMUSP00000087098	TRANSLATION	protein_coding	-	CCDS27558.1	1	549	19	7.98	1.5	224.3	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000063704	Mapk15	ENSMUST00000230929	ENSMUSP00000154893	TRANSLATION	protein_coding	start	-	-	145	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063704	Mapk15	ENSMUST00000161961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063704	Mapk15	ENSMUST00000160092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022554	Hgh1	ENSMUST00000230320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022554	Hgh1	ENSMUST00000229212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022554	Hgh1	ENSMUST00000023213	ENSMUSP00000023213	TRANSLATION	protein_coding	-	CCDS27569.1	1	393	0	0	1.5	251.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035828	Pim3	ENSMUST00000042818	ENSMUSP00000044603	TRANSLATION	protein_coding	-	CCDS27734.1	1	326	19	4.7	6.3	197	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000035828	Pim3	ENSMUST00000229969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035900	Gramd4	ENSMUST00000088931	ENSMUSP00000086321	TRANSLATION	protein_coding	-	CCDS27727.1	1	633	0	0	0.5	76.9	3	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035900	Gramd4	ENSMUST00000138134	ENSMUSP00000120796	TRANSLATION	protein_coding	-	CCDS56998.1	1	627	0	0	0.5	52.3	3	-4,-7	-	-	4.08	MINOR
ENSMUSG00000035900	Gramd4	ENSMUST00000123474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035900	Gramd4	ENSMUST00000123349	ENSMUSP00000117468	TRANSLATION	nonsense_mediated_decay	-	-	2	323	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000035900	Gramd4	ENSMUST00000147286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005268	Prlr	ENSMUST00000128450	ENSMUSP00000122209	TRANSLATION	protein_coding	-	-	1	292	0	6.78	0	91.4	3	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005268	Prlr	ENSMUST00000124470	ENSMUSP00000122219	TRANSLATION	protein_coding	-	CCDS27377.1	1	608	0	6.78	0.5	91.4	3	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000005268	Prlr	ENSMUST00000130720	ENSMUSP00000117084	TRANSLATION	protein_coding	stop	-	3	119	0	2.2	0	91.4	1	4,-1	-	-	-1	MINOR
ENSMUSG00000005268	Prlr	ENSMUST00000145428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005268	Prlr	ENSMUST00000132361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005268	Prlr	ENSMUST00000137867	ENSMUSP00000121935	TRANSLATION	nonsense_mediated_decay	-	-	2	292	0	6.78	0	91.4	3	4,-1	-	-	-1	MINOR
ENSMUSG00000005268	Prlr	ENSMUST00000128921	ENSMUSP00000121280	TRANSLATION	protein_coding	-	CCDS56976.1	1	310	0	6.78	1.5	91.4	3	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005268	Prlr	ENSMUST00000148257	ENSMUSP00000118355	TRANSLATION	protein_coding	-	CCDS56975.1	5	303	0	6.78	0.5	91.4	3	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000005268	Prlr	ENSMUST00000127467	ENSMUSP00000116211	TRANSLATION	protein_coding	stop	-	2	185	0	2.95	0	91.4	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000005268	Prlr	ENSMUST00000005400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005268	Prlr	ENSMUST00000138135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005268	Prlr	ENSMUST00000134410	ENSMUSP00000120417	TRANSLATION	protein_coding	stop	-	3	155	0	3.28	0	91.4	1	4,-1	-	-	-1	MINOR
ENSMUSG00000013611	Snx31	ENSMUST00000161202	ENSMUSP00000124063	TRANSLATION	protein_coding	-	CCDS84166.1	1	439	0	9.33	1.5	45.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000013611	Snx31	ENSMUST00000160936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013611	Snx31	ENSMUST00000013755	ENSMUSP00000013755	TRANSLATION	protein_coding	-	CCDS27430.1	1	438	0	9.33	1.5	45.5	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000013611	Snx31	ENSMUST00000162888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058441	Panx2	ENSMUST00000162424	ENSMUSP00000124354	TRANSLATION	protein_coding	-	CCDS49695.1	1	677	0	0	1.5	51.8	4	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000058441	Panx2	ENSMUST00000161372	ENSMUSP00000125514	TRANSLATION	protein_coding	-	-	1	651	0	0	0	38.7	4	-4,-7	-	-	4.482	MINOR
ENSMUSG00000058441	Panx2	ENSMUST00000159960	ENSMUSP00000124928	TRANSLATION	protein_coding	start	-	2	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022483	Col2a1	ENSMUST00000131910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022483	Col2a1	ENSMUST00000128547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022483	Col2a1	ENSMUST00000131560	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022483	Col2a1	ENSMUST00000230148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022483	Col2a1	ENSMUST00000139246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022483	Col2a1	ENSMUST00000127879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022483	Col2a1	ENSMUST00000133488	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022483	Col2a1	ENSMUST00000088355	ENSMUSP00000085693	TRANSLATION	protein_coding	-	CCDS49716.1	1	1419	5	32.25	5.1	621.4	0	4,-1	-	-	14.14	MINOR
ENSMUSG00000022483	Col2a1	ENSMUST00000023123	ENSMUSP00000023123	TRANSLATION	protein_coding	-	CCDS37189.2	1	1487	5	33.25	3.9	669.1	0	4,-1	-	-	18.414	PRINCIPAL:1
ENSMUSG00000022483	Col2a1	ENSMUST00000140064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022999	Lmbr1l	ENSMUST00000135051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022999	Lmbr1l	ENSMUST00000126159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022999	Lmbr1l	ENSMUST00000023736	ENSMUSP00000023736	TRANSLATION	protein_coding	-	CCDS27811.1	1	489	0	0	8.8	300.8	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000022999	Lmbr1l	ENSMUST00000231087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022999	Lmbr1l	ENSMUST00000127548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022999	Lmbr1l	ENSMUST00000128818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022999	Lmbr1l	ENSMUST00000109127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022999	Lmbr1l	ENSMUST00000123950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022463	Srebf2	ENSMUST00000229518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022463	Srebf2	ENSMUST00000231065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022463	Srebf2	ENSMUST00000229336	ENSMUSP00000155022	TRANSLATION	protein_coding	-	-	-	1096	0	2	0	58.5	2	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022463	Srebf2	ENSMUST00000229009	ENSMUSP00000154839	TRANSLATION	protein_coding	stop	-	-	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022463	Srebf2	ENSMUST00000230955	ENSMUSP00000155331	TRANSLATION	protein_coding	start/stop	-	-	247	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022463	Srebf2	ENSMUST00000230105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022463	Srebf2	ENSMUST00000023100	ENSMUSP00000023100	TRANSLATION	protein_coding	-	CCDS27683.1	1	1130	0	2	0.5	58.5	2	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000052560	Cpne8	ENSMUST00000088649	ENSMUSP00000086024	TRANSLATION	nonsense_mediated_decay	-	-	1	157	3	0.99	0	38.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052560	Cpne8	ENSMUST00000154569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052560	Cpne8	ENSMUST00000014777	ENSMUSP00000014777	TRANSLATION	protein_coding	-	CCDS27759.1	1	104	2	0.47	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052560	Cpne8	ENSMUST00000064391	ENSMUSP00000067774	TRANSLATION	protein_coding	-	CCDS27758.1	1	577	12	4.51	3.9	398.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000052560	Cpne8	ENSMUST00000140171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022191	Drosha	ENSMUST00000156594	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022191	Drosha	ENSMUST00000090292	ENSMUSP00000087762	TRANSLATION	protein_coding	-	CCDS49583.1	1	1373	7	14.6	5.1	196.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022191	Drosha	ENSMUST00000150211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022191	Drosha	ENSMUST00000141706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022191	Drosha	ENSMUST00000147647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022191	Drosha	ENSMUST00000141010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022191	Drosha	ENSMUST00000169061	ENSMUSP00000129279	TRANSLATION	protein_coding	-	CCDS49583.1	1	1373	7	14.6	5.1	196.6	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000022286	Grhl2	ENSMUST00000228589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022286	Grhl2	ENSMUST00000161405	ENSMUSP00000125410	TRANSLATION	protein_coding	-	-	1	451	0	0	0.5	255.6	0	-4,-5	-	-	4.326	MINOR
ENSMUSG00000022286	Grhl2	ENSMUST00000022895	ENSMUSP00000022895	TRANSLATION	protein_coding	-	CCDS27434.1	1	625	0	0	8.8	283.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022286	Grhl2	ENSMUST00000161933	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022286	Grhl2	ENSMUST00000161532	ENSMUSP00000124903	TRANSLATION	protein_coding	stop	-	2	152	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022286	Grhl2	ENSMUST00000159221	ENSMUSP00000123871	TRANSLATION	protein_coding	start	-	3	158	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022553	Maf1	ENSMUST00000160914	ENSMUSP00000124110	TRANSLATION	protein_coding	stop	-	5	142	0	1.25	0	108.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022553	Maf1	ENSMUST00000161527	ENSMUSP00000125387	TRANSLATION	protein_coding	-	CCDS27568.1	5	258	0	3	5.4	220.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022553	Maf1	ENSMUST00000161391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000161786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000160875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000023212	ENSMUSP00000023212	TRANSLATION	protein_coding	-	CCDS27568.1	1	258	0	3	5.4	220.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022553	Maf1	ENSMUST00000160853	ENSMUSP00000124893	TRANSLATION	protein_coding	-	CCDS27568.1	1	258	0	3	5.4	220.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022553	Maf1	ENSMUST00000160097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000160857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022553	Maf1	ENSMUST00000161072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022553	Maf1	ENSMUST00000160172	ENSMUSP00000124242	TRANSLATION	protein_coding	-	-	5	213	0	3	2.2	220.8	0	-4,-5	-	-	12.546	MINOR
ENSMUSG00000022553	Maf1	ENSMUST00000160069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000162865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022553	Maf1	ENSMUST00000162871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068600	Gml2	ENSMUST00000188180	ENSMUSP00000141185	TRANSLATION	protein_coding	-	-	1	94	0	0	0	0	0	3,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000068600	Gml2	ENSMUST00000186752	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068600	Gml2	ENSMUST00000188458	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068600	Gml2	ENSMUST00000096399	ENSMUSP00000094130	TRANSLATION	protein_coding	-	CCDS27534.1	1	176	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000022441	Efcab6	ENSMUST00000156187	ENSMUSP00000114909	TRANSLATION	protein_coding	-	CCDS27707.2	1	1516	15	3.92	0.5	284.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022441	Efcab6	ENSMUST00000163773	ENSMUSP00000128002	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022441	Efcab6	ENSMUST00000143592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022441	Efcab6	ENSMUST00000122836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022441	Efcab6	ENSMUST00000149563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022441	Efcab6	ENSMUST00000140633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022441	Efcab6	ENSMUST00000130551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022441	Efcab6	ENSMUST00000144169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022338	Eny2	ENSMUST00000228474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022338	Eny2	ENSMUST00000228130	ENSMUSP00000154106	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022338	Eny2	ENSMUST00000232045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022338	Eny2	ENSMUST00000232353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022338	Eny2	ENSMUST00000226336	ENSMUSP00000154687	TRANSLATION	nonsense_mediated_decay	-	-	-	53	0	1.5	0	55.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022338	Eny2	ENSMUST00000228372	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022338	Eny2	ENSMUST00000226355	ENSMUSP00000154030	TRANSLATION	nonsense_mediated_decay	-	-	-	56	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022338	Eny2	ENSMUST00000227425	ENSMUSP00000154226	TRANSLATION	nonsense_mediated_decay	-	-	-	56	0	1.5	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022338	Eny2	ENSMUST00000226827	ENSMUSP00000154515	TRANSLATION	protein_coding	-	-	-	96	0	3	21.5	123.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022338	Eny2	ENSMUST00000060652	ENSMUSP00000052905	TRANSLATION	protein_coding	-	CCDS27456.1	1	101	0	3	7.5	123.1	0	-4,-6	-	-	13.268	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000130575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023007	Prpf40b	ENSMUST00000145482	ENSMUSP00000115869	TRANSLATION	protein_coding	-	CCDS27818.1	1	873	0	7.678	0.5	180.3	0	-4,-7	-	-	11.88	PRINCIPAL:2
ENSMUSG00000023007	Prpf40b	ENSMUST00000118287	ENSMUSP00000113282	TRANSLATION	protein_coding	-	-	1	870	0	7.738	0	180.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000023007	Prpf40b	ENSMUST00000136980	ENSMUSP00000122649	TRANSLATION	protein_coding	-	-	5	857	0	7.738	0	180.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000023007	Prpf40b	ENSMUST00000023745	ENSMUSP00000023745	TRANSLATION	protein_coding	stop	-	5	852	0	7.678	0	180.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000138036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023007	Prpf40b	ENSMUST00000126955	ENSMUSP00000123527	TRANSLATION	protein_coding	start	-	5	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000134034	ENSMUSP00000120030	TRANSLATION	protein_coding	start	-	3	257	0	2.176	0	21.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000139330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023007	Prpf40b	ENSMUST00000150636	ENSMUSP00000119295	TRANSLATION	protein_coding	start	-	3	189	0	2.11	0	21.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000128352	ENSMUSP00000119556	TRANSLATION	protein_coding	stop	-	3	136	0	1.212	0	39	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000124275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023007	Prpf40b	ENSMUST00000153692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023007	Prpf40b	ENSMUST00000140806	ENSMUSP00000121260	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023007	Prpf40b	ENSMUST00000150641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022247	Brix1	ENSMUST00000022855	ENSMUSP00000022855	TRANSLATION	protein_coding	-	CCDS37042.1	1	353	0	0	5.1	135.3	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000022247	Brix1	ENSMUST00000168690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022247	Brix1	ENSMUST00000169050	ENSMUSP00000127437	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	43.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022247	Brix1	ENSMUST00000168761	ENSMUSP00000130602	TRANSLATION	nonsense_mediated_decay	start	-	5	88	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039942	Ptger4	ENSMUST00000120563	ENSMUSP00000112858	TRANSLATION	protein_coding	-	CCDS49575.1	1	488	0	0.4	2.7	119.5	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039942	Ptger4	ENSMUST00000133966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039942	Ptger4	ENSMUST00000047379	ENSMUSP00000048736	TRANSLATION	protein_coding	-	CCDS27365.1	1	513	0	0.4	0.5	119.5	6	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000068117	Mei1	ENSMUST00000189540	ENSMUSP00000140479	TRANSLATION	protein_coding	-	CCDS79396.1	1	894	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000068117	Mei1	ENSMUST00000229119	ENSMUSP00000154974	TRANSLATION	protein_coding	start	-	-	1324	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000068117	Mei1	ENSMUST00000089178	ENSMUSP00000086582	TRANSLATION	protein_coding	-	-	5	1268	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000068117	Mei1	ENSMUST00000188048	ENSMUSP00000139689	TRANSLATION	protein_coding	-	CCDS79396.1	1	894	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000068117	Mei1	ENSMUST00000186125	ENSMUSP00000140309	TRANSLATION	nonsense_mediated_decay	-	-	1	244	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059895	Ptp4a3	ENSMUST00000230044	ENSMUSP00000155312	TRANSLATION	protein_coding	stop	-	-	35	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000059895	Ptp4a3	ENSMUST00000230864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059895	Ptp4a3	ENSMUST00000230307	ENSMUSP00000155324	TRANSLATION	protein_coding	stop	-	-	35	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000059895	Ptp4a3	ENSMUST00000053232	ENSMUSP00000060956	TRANSLATION	protein_coding	-	CCDS27519.1	1	173	10	4.75	18.2	59.8	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000059895	Ptp4a3	ENSMUST00000231209	ENSMUSP00000155773	TRANSLATION	protein_coding	stop	-	-	35	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000059895	Ptp4a3	ENSMUST00000230177	ENSMUSP00000154829	TRANSLATION	protein_coding	-	CCDS27519.1	-	173	10	4.75	18.2	59.8	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000059895	Ptp4a3	ENSMUST00000167582	ENSMUSP00000131036	TRANSLATION	protein_coding	-	-	5	154	10	3.85	0.5	59.8	0	-4,-5	-	-	16.2	MINOR
ENSMUSG00000059895	Ptp4a3	ENSMUST00000165541	ENSMUSP00000132097	TRANSLATION	protein_coding	-	CCDS27519.1	5	173	10	4.75	18.2	59.8	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000059895	Ptp4a3	ENSMUST00000229339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059895	Ptp4a3	ENSMUST00000163582	ENSMUSP00000131281	TRANSLATION	protein_coding	-	CCDS27519.1	1	173	10	4.75	18.2	59.8	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000036678	Aaas	ENSMUST00000228959	ENSMUSP00000154915	TRANSLATION	protein_coding	start	-	-	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036678	Aaas	ENSMUST00000230349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036678	Aaas	ENSMUST00000231061	ENSMUSP00000155757	TRANSLATION	protein_coding	stop	-	-	299	0	2.9568	0	26.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036678	Aaas	ENSMUST00000230406	ENSMUSP00000155778	TRANSLATION	nonsense_mediated_decay	start	-	-	55	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036678	Aaas	ENSMUST00000230812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036678	Aaas	ENSMUST00000230710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036678	Aaas	ENSMUST00000231099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036678	Aaas	ENSMUST00000229315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036678	Aaas	ENSMUST00000230239	ENSMUSP00000155734	TRANSLATION	protein_coding	start/stop	-	-	147	0	1.122	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036678	Aaas	ENSMUST00000229900	ENSMUSP00000155299	TRANSLATION	nonsense_mediated_decay	start	-	-	64	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036678	Aaas	ENSMUST00000041208	ENSMUSP00000044604	TRANSLATION	protein_coding	-	CCDS27880.1	1	546	0	3.6768	5.1	26.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036678	Aaas	ENSMUST00000229589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036678	Aaas	ENSMUST00000230481	ENSMUSP00000155527	TRANSLATION	nonsense_mediated_decay	start	-	-	183	0	0.6648	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000018865	Sult4a1	ENSMUST00000229826	ENSMUSP00000155695	TRANSLATION	protein_coding	-	-	-	280	20	5.75	1.5	176.9	0	-4,-5	-	-	14.844	MINOR
ENSMUSG00000018865	Sult4a1	ENSMUST00000082365	ENSMUSP00000080973	TRANSLATION	protein_coding	-	CCDS27708.1	1	284	19	6.75	21.5	197.8	0	-4,-5	-	-	21.334	PRINCIPAL:1
ENSMUSG00000079105	C7	ENSMUST00000110689	ENSMUSP00000106317	TRANSLATION	protein_coding	-	CCDS56974.1	5	845	9	11.98	0.5	267.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000055748	Gsdmc4	ENSMUST00000188108	ENSMUSP00000140269	TRANSLATION	protein_coding	-	CCDS49617.1	1	480	0	5.1794	0.5	532.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055748	Gsdmc4	ENSMUST00000063530	ENSMUSP00000066072	TRANSLATION	protein_coding	-	CCDS49617.1	5	480	0	5.1794	0.5	532.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047108	Dnajb7	ENSMUST00000057236	ENSMUSP00000100712	TRANSLATION	protein_coding	-	CCDS37148.1	-	312	0	0.4	0.5	93.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034333	Zbed4	ENSMUST00000041297	ENSMUSP00000035437	TRANSLATION	protein_coding	-	CCDS27731.1	1	1168	16	0	1.5	255.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034333	Zbed4	ENSMUST00000160975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022236	Ropn1l	ENSMUST00000110408	ENSMUSP00000106038	TRANSLATION	protein_coding	-	CCDS37053.1	1	218	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022449	Adamts20	ENSMUST00000128797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022449	Adamts20	ENSMUST00000155907	ENSMUSP00000121696	TRANSLATION	protein_coding	-	CCDS49711.1	1	1425	18	10.56	0.5	506.1	0	1,-3	-	-	12	MINOR
ENSMUSG00000022449	Adamts20	ENSMUST00000035342	ENSMUSP00000036330	TRANSLATION	protein_coding	-	CCDS27770.1	1	1906	18	10.56	0.5	821.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000022449	Adamts20	ENSMUST00000129195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075524	4930407I10Rik	ENSMUST00000100396	ENSMUSP00000097965	TRANSLATION	protein_coding	-	CCDS49678.1	1	1512	0	0	0.5	351.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033039	Micall1	ENSMUST00000229048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033039	Micall1	ENSMUST00000230202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033039	Micall1	ENSMUST00000229004	ENSMUSP00000155420	TRANSLATION	nonsense_mediated_decay	start	-	-	98	0	2.5	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033039	Micall1	ENSMUST00000229113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033039	Micall1	ENSMUST00000229031	ENSMUSP00000154886	TRANSLATION	nonsense_mediated_decay	-	-	-	324	7	4	0	120.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033039	Micall1	ENSMUST00000230779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033039	Micall1	ENSMUST00000040320	ENSMUSP00000042053	TRANSLATION	protein_coding	-	CCDS49667.1	1	870	7	7.2	0.5	271.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033039	Micall1	ENSMUST00000229694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022564	Grina	ENSMUST00000229772	ENSMUSP00000154982	TRANSLATION	protein_coding	stop	-	-	79	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022564	Grina	ENSMUST00000023225	ENSMUSP00000023225	TRANSLATION	protein_coding	-	CCDS27563.1	1	345	0	0	1.5	121.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022564	Grina	ENSMUST00000229380	ENSMUSP00000155771	TRANSLATION	protein_coding	stop	-	-	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022564	Grina	ENSMUST00000229916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022564	Grina	ENSMUST00000230347	ENSMUSP00000155539	TRANSLATION	protein_coding	stop	-	-	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000116376	Tmem249	ENSMUST00000229074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116376	Tmem249	ENSMUST00000230604	ENSMUSP00000155040	TRANSLATION	protein_coding	-	-	-	171	0	0	0	206.5	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046761	Fam83h	ENSMUST00000060807	ENSMUSP00000059839	TRANSLATION	protein_coding	-	CCDS27559.1	1	1209	0	2	1.5	340.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000046761	Fam83h	ENSMUST00000170153	ENSMUSP00000126453	TRANSLATION	protein_coding	-	CCDS27559.1	1	1209	0	2	1.5	340.4	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000046761	Fam83h	ENSMUST00000238313	ENSMUSP00000158845	TRANSLATION	protein_coding	-	-	-	1409	0	2	0	340.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022367	Has2	ENSMUST00000050544	ENSMUSP00000062212	TRANSLATION	protein_coding	-	CCDS27480.1	1	552	13	0	17	52.9	0	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000054619	Mettl7a1	ENSMUST00000229574	ENSMUSP00000155283	TRANSLATION	protein_coding	-	-	-	82	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000067752	ENSMUSP00000065271	TRANSLATION	protein_coding	-	CCDS27833.1	1	244	17	2.93	6.3	76	1	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000054619	Mettl7a1	ENSMUST00000230472	ENSMUSP00000155621	TRANSLATION	protein_coding	stop	-	-	191	17	2.69	0	76	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000229588	ENSMUSP00000155112	TRANSLATION	protein_coding	-	-	-	200	17	2.09	0.5	65.7	1	2,-2	-	-	15.462	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000231166	ENSMUSP00000154972	TRANSLATION	protein_coding	-	-	-	115	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000230018	ENSMUSP00000155095	TRANSLATION	nonsense_mediated_decay	start	-	-	58	8	0.93	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000229217	ENSMUSP00000155295	TRANSLATION	protein_coding	-	-	-	193	8	2.19	0	52.3	0	-4,-7	-	-	8.61	MINOR
ENSMUSG00000054619	Mettl7a1	ENSMUST00000230252	ENSMUSP00000155267	TRANSLATION	protein_coding	stop	-	-	88	8	1.05	0	44.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000174021	ENSMUSP00000134672	TRANSLATION	protein_coding	-	CCDS56991.1	1	807	0	5.14	7.5	170.4	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000042632	Pla2g6	ENSMUST00000173109	ENSMUSP00000133554	TRANSLATION	protein_coding	stop	-	3	199	0	1.4	0	55.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000173632	ENSMUSP00000133998	TRANSLATION	protein_coding	stop	-	5	204	0	1.4	0	57.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000172936	ENSMUSP00000133578	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000172403	ENSMUSP00000131081	TRANSLATION	protein_coding	-	CCDS27637.1	1	752	0	4.86	5.1	169	0	-4,-2	-	-	13.251	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000047816	ENSMUSP00000044234	TRANSLATION	protein_coding	-	CCDS27637.1	1	752	0	4.86	5.1	169	0	-4,-2	-	-	13.251	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000174089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042632	Pla2g6	ENSMUST00000229011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042632	Pla2g6	ENSMUST00000173601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042632	Pla2g6	ENSMUST00000173163	ENSMUSP00000134456	TRANSLATION	protein_coding	-	CCDS27637.1	5	752	0	4.86	5.1	169	0	-4,-2	-	-	13.251	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000166977	ENSMUSP00000132071	TRANSLATION	protein_coding	-	CCDS27637.1	1	752	0	4.86	5.1	169	0	-4,-2	-	-	13.251	MINOR
ENSMUSG00000042632	Pla2g6	ENSMUST00000173412	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042632	Pla2g6	ENSMUST00000174375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049548	Krt82	ENSMUST00000023713	ENSMUSP00000023713	TRANSLATION	protein_coding	-	CCDS27854.1	1	516	0	4.932	0.5	371.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022253	Nadk2	ENSMUST00000188194	ENSMUSP00000140212	TRANSLATION	protein_coding	start	-	3	38	2	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022253	Nadk2	ENSMUST00000190874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000186069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022253	Nadk2	ENSMUST00000067760	ENSMUSP00000068318	TRANSLATION	protein_coding	-	-	5	452	20	1.77	1.5	0	0	-4,-1	-	-	12	PRINCIPAL:5
ENSMUSG00000022253	Nadk2	ENSMUST00000189437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000100790	ENSMUSP00000098354	TRANSLATION	protein_coding	-	-	5	430	20	1.77	1.5	0	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000022253	Nadk2	ENSMUST00000100789	ENSMUSP00000098353	TRANSLATION	protein_coding	-	-	5	401	17	1.27	0.5	0	0	-4,-1	-	-	8.31	MINOR
ENSMUSG00000022253	Nadk2	ENSMUST00000228453	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000227928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000227682	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000228397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000190591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022253	Nadk2	ENSMUST00000189211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116121	Gm49486	ENSMUST00000053926	ENSMUSP00000061125	TRANSLATION	protein_coding,RT	-	-	1	530	0	6.18	0	349.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000075427	Olfr288	ENSMUST00000154964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075427	Olfr288	ENSMUST00000165379	ENSMUSP00000132237	TRANSLATION	protein_coding	-	CCDS49719.1	2	318	0	0.32	0.5	161.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075402	Krt76	ENSMUST00000100179	ENSMUSP00000097754	TRANSLATION	protein_coding	-	CCDS27866.1	1	594	0	5.06	0.5	502.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000054115	Skp2	ENSMUST00000110585	ENSMUSP00000106215	TRANSLATION	protein_coding	-	-	1	354	0	6.7	1.2	51.5	0	-4,-5	-	-	10.078	MINOR
ENSMUSG00000054115	Skp2	ENSMUST00000190131	ENSMUSP00000139997	TRANSLATION	protein_coding	-	CCDS79360.1	1	389	0	7.7	0.5	51.5	0	-4,-5	-	-	12	MINOR
ENSMUSG00000054115	Skp2	ENSMUST00000191316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054115	Skp2	ENSMUST00000190406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054115	Skp2	ENSMUST00000096482	ENSMUSP00000094225	TRANSLATION	protein_coding	-	CCDS37037.1	1	424	0	7.7	6.3	51.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000047295	Smgc	ENSMUST00000109276	ENSMUSP00000104899	TRANSLATION	protein_coding	-	-	1	157	0	0	0	0	0	3,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000047295	Smgc	ENSMUST00000126508	ENSMUSP00000120826	TRANSLATION	protein_coding	stop	-	3	186	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000047295	Smgc	ENSMUST00000123935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047295	Smgc	ENSMUST00000136172	ENSMUSP00000119575	TRANSLATION	protein_coding	start	-	1	320	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047295	Smgc	ENSMUST00000109277	ENSMUSP00000104900	TRANSLATION	protein_coding	-	-	1	128	0	0	0	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000047295	Smgc	ENSMUST00000143271	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047295	Smgc	ENSMUST00000132674	ENSMUSP00000120578	TRANSLATION	protein_coding	start	-	5	350	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047295	Smgc	ENSMUST00000100293	ENSMUSP00000097866	TRANSLATION	protein_coding	-	-	1	700	0	0	0	0	0	4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000047295	Smgc	ENSMUST00000088555	ENSMUSP00000085915	TRANSLATION	protein_coding	-	CCDS27762.1	1	733	0	0	0.5	0	0	4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000047295	Smgc	ENSMUST00000130014	ENSMUSP00000118530	TRANSLATION	protein_coding	start	-	1	385	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022390	Zc3h7b	ENSMUST00000231108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022390	Zc3h7b	ENSMUST00000109554	ENSMUSP00000105181	TRANSLATION	protein_coding	-	CCDS37150.1	1	982	19	4.322	1.5	76.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022390	Zc3h7b	ENSMUST00000230590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022390	Zc3h7b	ENSMUST00000230368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022390	Zc3h7b	ENSMUST00000229044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022390	Zc3h7b	ENSMUST00000230946	ENSMUSP00000155100	TRANSLATION	protein_coding	stop	-	-	151	0	1.864	0	31.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016758	Bik	ENSMUST00000016902	ENSMUSP00000016902	TRANSLATION	protein_coding	-	CCDS27703.1	1	150	0	0	0.5	229.8	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016758	Bik	ENSMUST00000229165	ENSMUSP00000155439	TRANSLATION	protein_coding	stop	-	-	143	0	0	0	219.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016758	Bik	ENSMUST00000230912	ENSMUSP00000155083	TRANSLATION	protein_coding	-	CCDS27703.1	-	150	0	0	0.5	229.8	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016758	Bik	ENSMUST00000229964	ENSMUSP00000155777	TRANSLATION	protein_coding	-	-	-	106	0	0	0	174.7	1	-4,-7	-	-	2.694	MINOR
ENSMUSG00000097221	1810049J17Rik	ENSMUST00000180521	ENSMUSP00000137703	TRANSLATION	protein_coding	start	-	-	153	0	0	0	0	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000038736	Nudcd1	ENSMUST00000227645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038736	Nudcd1	ENSMUST00000228319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038736	Nudcd1	ENSMUST00000227789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038736	Nudcd1	ENSMUST00000227843	ENSMUSP00000154478	TRANSLATION	protein_coding	-	CCDS27455.1	-	582	0	0.6	2.7	59.6	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038736	Nudcd1	ENSMUST00000226660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038736	Nudcd1	ENSMUST00000226606	ENSMUSP00000154284	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038736	Nudcd1	ENSMUST00000038719	ENSMUSP00000042746	TRANSLATION	protein_coding	-	-	1	581	0	0.6	2.7	59.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022354	Ndufb9	ENSMUST00000022980	ENSMUSP00000022980	TRANSLATION	protein_coding	-	CCDS27495.1	1	179	0	4	7.5	42.7	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000022354	Ndufb9	ENSMUST00000228595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022487	Gtsf1	ENSMUST00000146736	ENSMUSP00000115670	TRANSLATION	protein_coding	start	-	3	194	6	0	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022487	Gtsf1	ENSMUST00000153930	ENSMUSP00000114244	TRANSLATION	protein_coding	-	CCDS49744.1	5	167	6	0	6.4	76.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022487	Gtsf1	ENSMUST00000136480	ENSMUSP00000116366	TRANSLATION	protein_coding	-	CCDS49744.1	2	167	6	0	6.4	76.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022487	Gtsf1	ENSMUST00000146675	ENSMUSP00000122193	TRANSLATION	protein_coding	-	CCDS49744.1	5	167	6	0	6.4	76.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022487	Gtsf1	ENSMUST00000023129	ENSMUSP00000023129	TRANSLATION	protein_coding	-	CCDS49744.1	1	167	6	0	6.4	76.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022487	Gtsf1	ENSMUST00000123724	ENSMUSP00000114733	TRANSLATION	protein_coding	-	-	5	186	6	0	0	76.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022487	Gtsf1	ENSMUST00000129837	ENSMUSP00000115123	TRANSLATION	protein_coding	stop	-	5	127	6	0	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022487	Gtsf1	ENSMUST00000147389	ENSMUSP00000120797	TRANSLATION	protein_coding	stop	-	3	161	6	0	0	76.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022487	Gtsf1	ENSMUST00000141364	ENSMUSP00000119234	TRANSLATION	protein_coding	-	CCDS49744.1	5	167	6	0	6.4	76.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022401	Xpnpep3	ENSMUST00000164144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022401	Xpnpep3	ENSMUST00000166831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022401	Xpnpep3	ENSMUST00000163754	ENSMUSP00000132822	TRANSLATION	protein_coding	-	CCDS84182.1	1	506	14	5.76	7.5	313.9	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000022401	Xpnpep3	ENSMUST00000041609	ENSMUSP00000038331	TRANSLATION	protein_coding	-	CCDS27668.1	1	386	6	3.19	0.5	199.9	0	-4,0	-	-	1.524	MINOR
ENSMUSG00000022401	Xpnpep3	ENSMUST00000163296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022401	Xpnpep3	ENSMUST00000167799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022401	Xpnpep3	ENSMUST00000165258	ENSMUSP00000130255	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000067615	Krt81	ENSMUST00000061185	ENSMUSP00000056525	TRANSLATION	protein_coding	-	CCDS49734.1	1	481	0	5	3.9	367.6	0	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000067615	Krt81	ENSMUST00000230541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016624	Phf21b	ENSMUST00000016768	ENSMUSP00000016768	TRANSLATION	protein_coding	-	-	1	475	8	1.3	4.8	32.6	0	-4,-2	-	-	19.768	ALTERNATIVE:1
ENSMUSG00000016624	Phf21b	ENSMUST00000162996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016624	Phf21b	ENSMUST00000162044	ENSMUSP00000124941	TRANSLATION	nonsense_mediated_decay	-	-	1	294	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016624	Phf21b	ENSMUST00000159939	ENSMUSP00000125355	TRANSLATION	protein_coding	-	CCDS37169.2	1	487	8	1.3	5.3	32.6	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000016624	Phf21b	ENSMUST00000160389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016624	Phf21b	ENSMUST00000159502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064201	Krt2	ENSMUST00000023712	ENSMUSP00000023712	TRANSLATION	protein_coding	-	CCDS37220.1	1	707	0	4.61	0.5	431.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050982	Apol10a	ENSMUST00000060551	ENSMUSP00000060650	TRANSLATION	protein_coding	-	CCDS27601.1	1	318	0	0	0.5	202.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071749	4933412E24Rik	ENSMUST00000096421	ENSMUSP00000094154	TRANSLATION	protein_coding	-	CCDS49612.1	-	513	0	0	0.5	607.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022312	Eif3h	ENSMUST00000226756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022312	Eif3h	ENSMUST00000228625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022312	Eif3h	ENSMUST00000228583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022312	Eif3h	ENSMUST00000022925	ENSMUSP00000022925	TRANSLATION	protein_coding	-	CCDS27461.1	1	352	0	8	7.5	83.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000071586	Gm10337	ENSMUST00000096145	ENSMUSP00000093859	TRANSLATION	protein_coding	start/stop	-	-	55	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000001657	Hoxc8	ENSMUST00000001703	ENSMUSP00000001703	TRANSLATION	protein_coding	-	CCDS27894.1	1	242	0	1	6.3	75.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000001657	Hoxc8	ENSMUST00000189484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022292	Rrm2b	ENSMUST00000145155	ENSMUSP00000120215	TRANSLATION	protein_coding	stop	-	2	47	0	1.5	0	70.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022292	Rrm2b	ENSMUST00000022901	ENSMUSP00000022901	TRANSLATION	protein_coding	-	CCDS27437.1	1	351	7	9.33	6.4	414.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022292	Rrm2b	ENSMUST00000144498	ENSMUSP00000121069	TRANSLATION	nonsense_mediated_decay	-	-	3	111	1	3.25	0	105.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022292	Rrm2b	ENSMUST00000127362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022292	Rrm2b	ENSMUST00000137636	ENSMUSP00000119400	TRANSLATION	protein_coding	-	-	5	299	7	7.58	0	361.2	0	-4,-5	-	-	11.286	MINOR
ENSMUSG00000022292	Rrm2b	ENSMUST00000146821	ENSMUSP00000123691	TRANSLATION	protein_coding	-	-	5	139	2	3.5	0	103.8	0	-4,-5	-	-	1.716	MINOR
ENSMUSG00000022292	Rrm2b	ENSMUST00000153481	ENSMUSP00000121188	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022292	Rrm2b	ENSMUST00000227688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022292	Rrm2b	ENSMUST00000145175	ENSMUSP00000114343	TRANSLATION	protein_coding	stop	-	5	99	1	3.08	0	113.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022376	Adcy8	ENSMUST00000023007	ENSMUSP00000023007	TRANSLATION	protein_coding	-	CCDS27506.1	1	1249	8	7.78	1.5	637	13	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000022376	Adcy8	ENSMUST00000228109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022376	Adcy8	ENSMUST00000228014	ENSMUSP00000154029	TRANSLATION	protein_coding	-	-	-	1219	8	7.78	1.5	637	12	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000037362	Ccn3	ENSMUST00000050027	ENSMUSP00000054389	TRANSLATION	protein_coding	-	CCDS27471.1	1	354	3	0	1.5	128	0	3,-4	-	-	9	PRINCIPAL:1
ENSMUSG00000056656	Apol8	ENSMUST00000230332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056656	Apol8	ENSMUST00000229445	ENSMUSP00000155102	TRANSLATION	protein_coding	stop	-	-	78	0	0	0	50.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056656	Apol8	ENSMUST00000229332	ENSMUSP00000155474	TRANSLATION	protein_coding	stop	-	-	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056656	Apol8	ENSMUST00000089450	ENSMUSP00000086873	TRANSLATION	protein_coding	-	CCDS56989.1	5	339	0	0	0.5	428.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000056656	Apol8	ENSMUST00000070911	ENSMUSP00000064237	TRANSLATION	protein_coding	-	CCDS56989.1	1	339	0	0	0.5	428.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064373	Selenop	ENSMUST00000082424	ENSMUSP00000081004	TRANSLATION	protein_coding	-	CCDS27357.1	5	380	0	0	0.5	596.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000064373	Selenop	ENSMUST00000160930	ENSMUSP00000125505	TRANSLATION	protein_coding	stop	-	3	177	0	0	0	295.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000064373	Selenop	ENSMUST00000159158	ENSMUSP00000125632	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	166.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000064373	Selenop	ENSMUST00000159216	ENSMUSP00000124305	TRANSLATION	protein_coding	-	CCDS27357.1	5	380	0	0	0.5	596.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000064373	Selenop	ENSMUST00000159247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064373	Selenop	ENSMUST00000160311	ENSMUSP00000124580	TRANSLATION	protein_coding	stop	-	2	110	0	0	0	124.5	0	3,-2	-	-	-1	MINOR
ENSMUSG00000064373	Selenop	ENSMUST00000160787	ENSMUSP00000124852	TRANSLATION	protein_coding	stop	-	5	177	0	0	0	295.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022231	Sema5a	ENSMUST00000227976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000228442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000228555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000228015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000067458	ENSMUSP00000069024	TRANSLATION	protein_coding	-	CCDS37055.1	1	1074	0	11.16	7.5	608.9	0	1,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000022231	Sema5a	ENSMUST00000227802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000226876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022231	Sema5a	ENSMUST00000227429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022231	Sema5a	ENSMUST00000228103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037570	Mcrs1	ENSMUST00000229359	ENSMUSP00000155541	TRANSLATION	protein_coding	stop	-	-	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037570	Mcrs1	ENSMUST00000229671	ENSMUSP00000155008	TRANSLATION	protein_coding	stop	-	-	88	0	0	0	96.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037570	Mcrs1	ENSMUST00000229399	ENSMUSP00000155583	TRANSLATION	nonsense_mediated_decay	start	-	-	135	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037570	Mcrs1	ENSMUST00000229143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037570	Mcrs1	ENSMUST00000229656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037570	Mcrs1	ENSMUST00000229926	ENSMUSP00000154847	TRANSLATION	protein_coding	stop	-	-	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037570	Mcrs1	ENSMUST00000041190	ENSMUSP00000043901	TRANSLATION	protein_coding	-	CCDS37199.1	1	462	0	0	8.8	338	0	-4,-5	-	-	9	PRINCIPAL:3
ENSMUSG00000037570	Mcrs1	ENSMUST00000231020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037570	Mcrs1	ENSMUST00000230444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037570	Mcrs1	ENSMUST00000163506	ENSMUSP00000131407	TRANSLATION	protein_coding	-	CCDS49728.1	1	449	0	0	7.4	338	0	-4,-5	-	-	8.463	ALTERNATIVE:1
ENSMUSG00000036273	Lrrk2	ENSMUST00000060642	ENSMUSP00000052584	TRANSLATION	protein_coding	-	CCDS37180.1	1	2527	0	10.32	1.5	324.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036273	Lrrk2	ENSMUST00000172797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036273	Lrrk2	ENSMUST00000133743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036273	Lrrk2	ENSMUST00000140734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036273	Lrrk2	ENSMUST00000137657	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036273	Lrrk2	ENSMUST00000156900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058099	Nfam1	ENSMUST00000231165	ENSMUSP00000154945	TRANSLATION	protein_coding	-	CCDS70652.1	-	264	0	0	0.5	0	1	-2,-4	-	-	0	ALTERNATIVE:2
ENSMUSG00000058099	Nfam1	ENSMUST00000023076	ENSMUSP00000023076	TRANSLATION	protein_coding	-	CCDS70651.1	1	213	0	0	0.5	0	1	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000058099	Nfam1	ENSMUST00000109503	ENSMUSP00000105129	TRANSLATION	protein_coding	-	CCDS27694.1	1	224	0	0	0.5	0	1	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000058099	Nfam1	ENSMUST00000231204	ENSMUSP00000155610	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058099	Nfam1	ENSMUST00000100377	ENSMUSP00000097946	TRANSLATION	nonsense_mediated_decay	-	-	1	104	0	0	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000022466	Rpap3	ENSMUST00000023104	ENSMUSP00000023104	TRANSLATION	protein_coding	-	CCDS27782.1	1	660	0	7.3	1.5	163.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022466	Rpap3	ENSMUST00000229109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022466	Rpap3	ENSMUST00000229008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022243	Slc45a2	ENSMUST00000117100	ENSMUSP00000112408	TRANSLATION	protein_coding	-	CCDS27382.1	1	530	0	0	2.7	50.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071724	Smpd5	ENSMUST00000096370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071724	Smpd5	ENSMUST00000163991	ENSMUSP00000134687	TRANSLATION	protein_coding	-	CCDS56988.1	1	483	5	0	1.5	26.2	0	-4,-2	-	-	11	PRINCIPAL:1
ENSMUSG00000071724	Smpd5	ENSMUST00000171192	ENSMUSP00000133693	TRANSLATION	nonsense_mediated_decay	start	-	3	117	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071724	Smpd5	ENSMUST00000167433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010601	Apol7a	ENSMUST00000010745	ENSMUSP00000010745	TRANSLATION	protein_coding	-	CCDS37125.1	1	418	0	0	0.5	437.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010601	Apol7a	ENSMUST00000177135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010601	Apol7a	ENSMUST00000176074	ENSMUSP00000134864	TRANSLATION	protein_coding	-	CCDS37125.1	1	418	0	0	0.5	437.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010601	Apol7a	ENSMUST00000175919	ENSMUSP00000135864	TRANSLATION	protein_coding	-	CCDS37125.1	1	418	0	0	0.5	437.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000010601	Apol7a	ENSMUST00000175789	ENSMUSP00000135369	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022184	Fbxo4	ENSMUST00000148169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022184	Fbxo4	ENSMUST00000022791	ENSMUSP00000022791	TRANSLATION	protein_coding	-	CCDS27359.1	1	385	0	5.5	4.1	27.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000022184	Fbxo4	ENSMUST00000148817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023041	Krt6b	ENSMUST00000023786	ENSMUSP00000023786	TRANSLATION	protein_coding	-	CCDS27859.1	1	554	0	4.69	1.5	503.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000058600	Rpl30	ENSMUST00000135417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058600	Rpl30	ENSMUST00000079735	ENSMUSP00000106014	TRANSLATION	protein_coding	-	CCDS37057.1	1	115	0	3.33	19.3	90.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000058600	Rpl30	ENSMUST00000009039	ENSMUSP00000009039	TRANSLATION	protein_coding	-	CCDS37057.1	1	115	0	3.33	19.3	90.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000058600	Rpl30	ENSMUST00000142643	ENSMUSP00000154172	TRANSLATION	protein_coding	-	-	2	94	0	2.5	0	84.1	0	-4,-7	-	-	9.906	MINOR
ENSMUSG00000058600	Rpl30	ENSMUST00000140527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058600	Rpl30	ENSMUST00000136653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064232	Gm5414	ENSMUST00000062879	ENSMUSP00000059101	TRANSLATION	protein_coding	-	CCDS27857.1	2	552	0	4.53	0.5	414.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000091604	Gm17349	ENSMUST00000163472	ENSMUSP00000128823	TRANSLATION	protein_coding	start	-	5	99	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000033237	Arid2	ENSMUST00000175735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033237	Arid2	ENSMUST00000096250	ENSMUSP00000093969	TRANSLATION	protein_coding	-	CCDS37185.2	5	1828	8	2.8	0.5	174.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000033237	Arid2	ENSMUST00000134985	ENSMUSP00000135829	TRANSLATION	protein_coding	-	-	1	145	0	2.8	0	91.8	0	-4,-6	-	-	7.062	MINOR
ENSMUSG00000033237	Arid2	ENSMUST00000176739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022375	Lrrc6	ENSMUST00000023006	ENSMUSP00000023006	TRANSLATION	protein_coding	-	CCDS49620.1	1	473	0	1.95	2.7	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023055	Calcoco1	ENSMUST00000229398	ENSMUSP00000155415	TRANSLATION	nonsense_mediated_decay	-	-	-	68	0	1	0	65.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023055	Calcoco1	ENSMUST00000166943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023055	Calcoco1	ENSMUST00000023818	ENSMUSP00000023818	TRANSLATION	protein_coding	-	CCDS27889.1	1	691	3	3.96	7.5	792.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023055	Calcoco1	ENSMUST00000168112	ENSMUSP00000128307	TRANSLATION	protein_coding	start	-	5	232	3	0	0	115.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023055	Calcoco1	ENSMUST00000230035	ENSMUSP00000155446	TRANSLATION	protein_coding	stop	-	-	533	0	3.63	0	687.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023055	Calcoco1	ENSMUST00000171838	ENSMUSP00000130170	TRANSLATION	protein_coding	-	-	1	633	0	3.96	0	792.1	0	-4,-7	-	-	12	MINOR
ENSMUSG00000023055	Calcoco1	ENSMUST00000230374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023055	Calcoco1	ENSMUST00000229231	ENSMUSP00000155767	TRANSLATION	protein_coding	-	-	-	606	3	2.8	1.2	335.3	0	-4,-7	-	-	6.771	MINOR
ENSMUSG00000023055	Calcoco1	ENSMUST00000230702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022340	Sybu	ENSMUST00000110269	ENSMUSP00000105898	TRANSLATION	protein_coding	-	CCDS37070.1	1	593	0	0	0.5	465	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000022340	Sybu	ENSMUST00000227305	ENSMUSP00000154372	TRANSLATION	protein_coding	-	-	-	664	0	0	1.5	465	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000022340	Sybu	ENSMUST00000226214	ENSMUSP00000154431	TRANSLATION	nonsense_mediated_decay	-	-	-	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022340	Sybu	ENSMUST00000228639	ENSMUSP00000153979	TRANSLATION	protein_coding	-	-	-	135	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022340	Sybu	ENSMUST00000228057	ENSMUSP00000153759	TRANSLATION	protein_coding	-	CCDS37071.1	-	665	0	0	1.5	465	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000022340	Sybu	ENSMUST00000226825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022340	Sybu	ENSMUST00000110267	ENSMUSP00000105896	TRANSLATION	protein_coding	-	CCDS37071.1	1	665	0	0	1.5	465	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000022340	Sybu	ENSMUST00000090057	ENSMUSP00000087511	TRANSLATION	protein_coding	-	CCDS37069.1	1	793	0	0	0.5	465	0	-4,-7	-	-	6	PRINCIPAL:4
ENSMUSG00000022340	Sybu	ENSMUST00000227081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023027	Atf1	ENSMUST00000169408	ENSMUSP00000129833	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000171869	ENSMUSP00000131278	TRANSLATION	protein_coding	stop	-	3	67	0	0.8	0	44.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000165804	ENSMUSP00000127969	TRANSLATION	protein_coding	stop	-	5	76	0	1.13	0	58.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000166809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023027	Atf1	ENSMUST00000023769	ENSMUSP00000023769	TRANSLATION	protein_coding	-	CCDS27832.1	1	269	0	2.98	6.3	140.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000023027	Atf1	ENSMUST00000166435	ENSMUSP00000127985	TRANSLATION	protein_coding	start	-	5	100	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000168103	ENSMUSP00000155718	TRANSLATION	nonsense_mediated_decay	start	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000172154	ENSMUSP00000132907	TRANSLATION	protein_coding	stop	-	3	178	0	1.13	0	66.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023027	Atf1	ENSMUST00000163855	ENSMUSP00000126491	TRANSLATION	protein_coding	stop	-	5	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015365	Mov10l1	ENSMUST00000015509	ENSMUSP00000015509	TRANSLATION	protein_coding	-	CCDS27737.1	5	1187	12	5.02	0.5	249.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000015365	Mov10l1	ENSMUST00000143030	ENSMUSP00000134200	TRANSLATION	protein_coding	start	-	5	310	4	3.44	0	192.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015365	Mov10l1	ENSMUST00000156949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015365	Mov10l1	ENSMUST00000148198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015365	Mov10l1	ENSMUST00000146993	ENSMUSP00000118437	TRANSLATION	protein_coding	-	-	5	1239	12	5.02	0.5	249.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000005360	Slc1a3	ENSMUST00000125997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005360	Slc1a3	ENSMUST00000005493	ENSMUSP00000005493	TRANSLATION	protein_coding	-	CCDS27373.1	1	543	13	7.5	13	446	7	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000005360	Slc1a3	ENSMUST00000126747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005360	Slc1a3	ENSMUST00000128879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005360	Slc1a3	ENSMUST00000129325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005360	Slc1a3	ENSMUST00000133309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005360	Slc1a3	ENSMUST00000157065	ENSMUSP00000118902	TRANSLATION	protein_coding	-	-	1	129	0	2	1.3	35	2	-4,-6	-	-	0.1	MINOR
ENSMUSG00000005360	Slc1a3	ENSMUST00000153455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058290	Espl1	ENSMUST00000230212	ENSMUSP00000155074	TRANSLATION	protein_coding	stop	-	-	165	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058290	Espl1	ENSMUST00000231207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058290	Espl1	ENSMUST00000229942	ENSMUSP00000155666	TRANSLATION	nonsense_mediated_decay	start	-	-	110	0	1.7	0	89.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058290	Espl1	ENSMUST00000064924	ENSMUSP00000064465	TRANSLATION	protein_coding	-	CCDS27878.1	1	2118	0	6.278	0.5	301.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058290	Espl1	ENSMUST00000230222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058290	Espl1	ENSMUST00000230116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058290	Espl1	ENSMUST00000230617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058290	Espl1	ENSMUST00000229050	ENSMUSP00000155304	TRANSLATION	protein_coding	-	CCDS27878.1	-	2118	0	6.278	0.5	301.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058290	Espl1	ENSMUST00000231104	ENSMUSP00000155469	TRANSLATION	protein_coding	stop	-	-	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063354	Slc39a4	ENSMUST00000230317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063354	Slc39a4	ENSMUST00000230977	ENSMUSP00000155442	TRANSLATION	protein_coding	-	CCDS27578.1	-	660	0	3.88	1.5	212.6	6	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000063354	Slc39a4	ENSMUST00000073428	ENSMUSP00000073134	TRANSLATION	protein_coding	-	-	1	607	0	3.88	0	144.9	5	2,-2	-	-	7.938	MINOR
ENSMUSG00000063354	Slc39a4	ENSMUST00000229613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059213	Ddn	ENSMUST00000230409	ENSMUSP00000155382	TRANSLATION	protein_coding	stop	-	-	102	0	0	0	199.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059213	Ddn	ENSMUST00000075444	ENSMUSP00000074895	TRANSLATION	protein_coding	-	CCDS49723.1	1	710	0	0	0.5	1227.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044986	Tst	ENSMUST00000231525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044986	Tst	ENSMUST00000058659	ENSMUSP00000055743	TRANSLATION	protein_coding	-	CCDS27614.1	1	297	3	2	6.3	97.1	0	-4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000022469	Rapgef3	ENSMUST00000134885	ENSMUSP00000135317	TRANSLATION	protein_coding	-	-	5	216	0	4.905	0	139.2	0	-3,-6	-	-	0	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000146620	ENSMUSP00000116673	TRANSLATION	protein_coding	stop	-	3	150	0	2.48	0	63.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000134371	ENSMUSP00000122746	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000125002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022469	Rapgef3	ENSMUST00000146214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022469	Rapgef3	ENSMUST00000155810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022469	Rapgef3	ENSMUST00000153241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022469	Rapgef3	ENSMUST00000126854	ENSMUSP00000116426	TRANSLATION	protein_coding	-	CCDS49714.1	1	926	0	19.429	5.1	338.2	0	-4,-5	-	-	13.548	PRINCIPAL:2
ENSMUSG00000022469	Rapgef3	ENSMUST00000123397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022469	Rapgef3	ENSMUST00000135080	ENSMUSP00000117337	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000177352	ENSMUSP00000135238	TRANSLATION	protein_coding	-	-	5	884	0	19.429	6.3	338.2	0	-4,0	-	-	14	ALTERNATIVE:1
ENSMUSG00000022469	Rapgef3	ENSMUST00000175894	ENSMUSP00000135194	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000142196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022469	Rapgef3	ENSMUST00000129223	ENSMUSP00000118148	TRANSLATION	protein_coding	-	CCDS37187.2	1	918	0	19.165	0.5	332.6	0	-4,-5	-	-	11.136	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000149419	ENSMUSP00000122285	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022469	Rapgef3	ENSMUST00000153464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022469	Rapgef3	ENSMUST00000128775	ENSMUSP00000120126	TRANSLATION	protein_coding	-	CCDS49713.1	1	909	0	18.929	0.5	313	0	-4,-5	-	-	9.486	MINOR
ENSMUSG00000050846	Zfp623	ENSMUST00000037260	ENSMUSP00000036049	TRANSLATION	protein_coding	-	CCDS27556.1	1	499	48	0.4	1.5	270.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022389	Tef	ENSMUST00000023024	ENSMUSP00000023024	TRANSLATION	protein_coding	-	CCDS27672.1	1	301	0	1	1.5	57.6	0	-4,-5	-	-	12.238	MINOR
ENSMUSG00000022389	Tef	ENSMUST00000168200	ENSMUSP00000132026	TRANSLATION	protein_coding	stop	-	5	106	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022389	Tef	ENSMUST00000164673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022389	Tef	ENSMUST00000109553	ENSMUSP00000105180	TRANSLATION	protein_coding	-	CCDS27671.2	1	285	0	1	5.2	57.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022389	Tef	ENSMUST00000168632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022389	Tef	ENSMUST00000166302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022389	Tef	ENSMUST00000169952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022389	Tef	ENSMUST00000172208	ENSMUSP00000129748	TRANSLATION	protein_coding	stop	-	2	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022389	Tef	ENSMUST00000167138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022389	Tef	ENSMUST00000170027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022451	Twf1	ENSMUST00000127347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022451	Twf1	ENSMUST00000152590	ENSMUSP00000119302	TRANSLATION	protein_coding	stop	-	3	114	0	2.83	0	61.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022451	Twf1	ENSMUST00000155654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022451	Twf1	ENSMUST00000023087	ENSMUSP00000023087	TRANSLATION	protein_coding	-	CCDS27773.1	1	350	0	7.58	13.8	143.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022234	Cct5	ENSMUST00000161266	ENSMUSP00000125566	TRANSLATION	protein_coding	stop	-	2	199	14	3.5	0	218.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022234	Cct5	ENSMUST00000022842	ENSMUSP00000022842	TRANSLATION	protein_coding	-	CCDS27411.1	1	541	24	10.5	19.5	525.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022234	Cct5	ENSMUST00000160174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022234	Cct5	ENSMUST00000159449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022234	Cct5	ENSMUST00000159121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023032	Slc4a8	ENSMUST00000023776	ENSMUSP00000023776	TRANSLATION	protein_coding	-	CCDS37214.1	1	1089	0	11.7	1.5	1163.1	3	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000023032	Slc4a8	ENSMUST00000161564	ENSMUSP00000123864	TRANSLATION	protein_coding	-	-	3	68	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023032	Slc4a8	ENSMUST00000162805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023032	Slc4a8	ENSMUST00000162483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023032	Slc4a8	ENSMUST00000162049	ENSMUSP00000125090	TRANSLATION	protein_coding	-	CCDS84193.1	1	1037	0	11.7	0.5	1163.1	3	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000023032	Slc4a8	ENSMUST00000160256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023032	Slc4a8	ENSMUST00000162744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043556	Fbxl7	ENSMUST00000226377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043556	Fbxl7	ENSMUST00000059204	ENSMUSP00000061305	TRANSLATION	protein_coding	-	CCDS37052.1	1	491	0	0.96	10.6	119	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022476	Polr3h	ENSMUST00000230050	ENSMUSP00000155181	TRANSLATION	protein_coding	-	-	-	175	0	4.05	2.5	177.8	0	-4,-5	-	-	8.638	MINOR
ENSMUSG00000022476	Polr3h	ENSMUST00000229402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022476	Polr3h	ENSMUST00000230066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022476	Polr3h	ENSMUST00000023113	ENSMUSP00000023113	TRANSLATION	protein_coding	-	CCDS27676.1	1	204	0	4.8	12.8	217.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000022476	Polr3h	ENSMUST00000230842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022476	Polr3h	ENSMUST00000230669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022476	Polr3h	ENSMUST00000230765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063765	Chadl	ENSMUST00000072910	ENSMUSP00000072682	TRANSLATION	protein_coding	-	CCDS49677.1	5	748	0	5.1	0.5	297.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000063765	Chadl	ENSMUST00000173898	ENSMUSP00000133981	TRANSLATION	nonsense_mediated_decay	start	-	1	256	0	2.4	0	107.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063765	Chadl	ENSMUST00000230849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063765	Chadl	ENSMUST00000173598	ENSMUSP00000133834	TRANSLATION	nonsense_mediated_decay	start	-	1	282	0	2.9	0	140	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071713	Csf2rb	ENSMUST00000229678	ENSMUSP00000155092	TRANSLATION	protein_coding	-	-	-	541	0	9.29	0	58.7	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000071713	Csf2rb	ENSMUST00000096355	ENSMUSP00000094082	TRANSLATION	protein_coding	-	CCDS27612.1	1	896	0	9.29	0.5	58.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000071713	Csf2rb	ENSMUST00000229657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071713	Csf2rb	ENSMUST00000229034	ENSMUSP00000155050	TRANSLATION	protein_coding	stop	-	-	46	0	1.1	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000071713	Csf2rb	ENSMUST00000231888	ENSMUSP00000155947	TRANSLATION	protein_coding	stop	-	-	66	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071713	Csf2rb	ENSMUST00000229920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071713	Csf2rb	ENSMUST00000230264	ENSMUSP00000154836	TRANSLATION	protein_coding	-	CCDS27612.1	-	896	0	9.29	0.5	58.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000071713	Csf2rb	ENSMUST00000231769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019080	Mfsd3	ENSMUST00000230468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019080	Mfsd3	ENSMUST00000019224	ENSMUSP00000019224	TRANSLATION	protein_coding	-	CCDS27587.1	1	412	0	0	5.1	49.5	0	-1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000019080	Mfsd3	ENSMUST00000229018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019080	Mfsd3	ENSMUST00000229098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045350	Fam186a	ENSMUST00000062631	ENSMUSP00000053434	TRANSLATION	protein_coding	-	CCDS37207.1	1	104	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000045350	Fam186a	ENSMUST00000100209	ENSMUSP00000097783	TRANSLATION	protein_coding	-	-	5	3035	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000054117	Zdhhc25	ENSMUST00000066949	ENSMUSP00000136289	TRANSLATION	protein_coding	-	CCDS56999.1	-	279	8	0	1.5	105.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006369	Fbln1	ENSMUST00000160798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006369	Fbln1	ENSMUST00000057410	ENSMUSP00000054583	TRANSLATION	protein_coding	-	CCDS27719.1	1	705	59	4.8	3.9	279	0	3,-1	-	-	19	PRINCIPAL:3
ENSMUSG00000006369	Fbln1	ENSMUST00000109432	ENSMUSP00000105058	TRANSLATION	protein_coding	-	CCDS84186.1	1	685	59	4.8	3.9	279	0	3,-1	-	-	19	ALTERNATIVE:2
ENSMUSG00000022313	Utp23	ENSMUST00000136129	ENSMUSP00000124832	TRANSLATION	protein_coding	-	-	1	143	0	1.184	0	38.6	0	-4,-5	-	-	4.656	MINOR
ENSMUSG00000022313	Utp23	ENSMUST00000059599	ENSMUSP00000050603	TRANSLATION	protein_coding	-	-	1	68	0	1.25	0	0	0	-4,-7	-	-	2.508	MINOR
ENSMUSG00000022313	Utp23	ENSMUST00000161651	ENSMUSP00000124157	TRANSLATION	protein_coding	-	-	5	120	0	0.8	0	0	0	-4,-7	-	-	1.602	MINOR
ENSMUSG00000022313	Utp23	ENSMUST00000137116	ENSMUSP00000119261	TRANSLATION	protein_coding	-	CCDS27462.1	1	249	0	2.994	5.1	100.5	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000072487	Mroh5	ENSMUST00000110021	ENSMUSP00000105648	TRANSLATION	protein_coding	-	-	1	427	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000072487	Mroh5	ENSMUST00000071419	ENSMUSP00000071366	TRANSLATION	protein_coding	-	CCDS27520.1	1	424	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000072487	Mroh5	ENSMUST00000238402	ENSMUSP00000158590	TRANSLATION	protein_coding	-	-	-	1293	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000072487	Mroh5	ENSMUST00000151999	ENSMUSP00000118236	TRANSLATION	nonsense_mediated_decay	-	-	1	1007	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000072487	Mroh5	ENSMUST00000136698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056665	Them6	ENSMUST00000070923	ENSMUSP00000069692	TRANSLATION	protein_coding	-	CCDS27527.1	1	207	0	0	2.8	80.4	0	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051518	Rps19bp1	ENSMUST00000052499	ENSMUSP00000061167	TRANSLATION	protein_coding	-	CCDS27662.1	1	143	0	0	0.5	131.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051518	Rps19bp1	ENSMUST00000230189	ENSMUSP00000155546	TRANSLATION	nonsense_mediated_decay	start	-	-	64	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051518	Rps19bp1	ENSMUST00000229962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023020	Cox14	ENSMUST00000023761	ENSMUSP00000023761	TRANSLATION	protein_coding	-	CCDS37205.1	1	57	0	0	7.5	44.7	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000023020	Cox14	ENSMUST00000238530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022526	Zfp251	ENSMUST00000229494	ENSMUSP00000155649	TRANSLATION	protein_coding	stop	-	-	622	49	0.6	0	330.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022526	Zfp251	ENSMUST00000080406	ENSMUSP00000079268	TRANSLATION	protein_coding	-	CCDS27593.1	1	632	49	0.6	1.5	330.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022526	Zfp251	ENSMUST00000230524	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022526	Zfp251	ENSMUST00000230315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022261	Sdc2	ENSMUST00000022871	ENSMUSP00000022871	TRANSLATION	protein_coding	-	CCDS27413.1	1	202	0	0	4.1	104	0	4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000010830	Kdelr3	ENSMUST00000010974	ENSMUSP00000010974	TRANSLATION	protein_coding	-	CCDS27642.1	1	214	0	0	18.2	179.1	0	-1,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000009733	Tfcp2	ENSMUST00000229265	ENSMUSP00000155770	TRANSLATION	protein_coding	stop	-	-	41	0	0	0	33.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009733	Tfcp2	ENSMUST00000229696	ENSMUSP00000155683	TRANSLATION	protein_coding	-	CCDS27840.1	-	502	0	0	6.5	191.4	0	-4,-7	-	-	8	PRINCIPAL:2
ENSMUSG00000009733	Tfcp2	ENSMUST00000009877	ENSMUSP00000009877	TRANSLATION	protein_coding	-	-	1	500	0	0	6.5	191.4	0	-4,-7	-	-	8	ALTERNATIVE:1
ENSMUSG00000009733	Tfcp2	ENSMUST00000230039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009733	Tfcp2	ENSMUST00000231174	ENSMUSP00000155598	TRANSLATION	protein_coding	start	-	-	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009733	Tfcp2	ENSMUST00000231138	ENSMUSP00000155196	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009733	Tfcp2	ENSMUST00000230363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009733	Tfcp2	ENSMUST00000229581	ENSMUSP00000155581	TRANSLATION	protein_coding	-	-	-	505	0	0	0	191.4	0	-4,-7	-	-	6	MINOR
ENSMUSG00000009733	Tfcp2	ENSMUST00000230254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042961	Egflam	ENSMUST00000162105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042961	Egflam	ENSMUST00000160314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042961	Egflam	ENSMUST00000160207	ENSMUSP00000125188	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0.6	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000042961	Egflam	ENSMUST00000159726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042961	Egflam	ENSMUST00000058593	ENSMUSP00000055599	TRANSLATION	protein_coding	-	CCDS27370.1	1	1009	4	14.24	1.5	432.5	0	2,-1	-	-	15.868	PRINCIPAL:3
ENSMUSG00000042961	Egflam	ENSMUST00000096494	ENSMUSP00000094238	TRANSLATION	protein_coding	-	CCDS79359.1	1	1017	4	14.306	1.5	432.5	0	2,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000042961	Egflam	ENSMUST00000160273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045608	Dbx2	ENSMUST00000229611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045608	Dbx2	ENSMUST00000054244	ENSMUSP00000060424	TRANSLATION	protein_coding	-	CCDS37183.1	1	377	0	1.2	1.5	72.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009585	Apobec3	ENSMUST00000230135	ENSMUSP00000155852	TRANSLATION	protein_coding	stop	-	-	97	5	2.01	0	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000109620	ENSMUSP00000105249	TRANSLATION	protein_coding	-	CCDS49669.1	1	429	10	7.92	0.5	293.9	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000009585	Apobec3	ENSMUST00000175827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009585	Apobec3	ENSMUST00000177098	ENSMUSP00000135079	TRANSLATION	nonsense_mediated_decay	-	-	1	392	10	7.92	0.5	293.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000175849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009585	Apobec3	ENSMUST00000177006	ENSMUSP00000135507	TRANSLATION	nonsense_mediated_decay	-	-	1	46	0	0.1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000230410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009585	Apobec3	ENSMUST00000175714	ENSMUSP00000135027	TRANSLATION	protein_coding	-	-	1	440	10	7.92	0	293.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000009585	Apobec3	ENSMUST00000175752	ENSMUSP00000135358	TRANSLATION	protein_coding	-	-	1	407	10	7.92	0	293.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000009585	Apobec3	ENSMUST00000175801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009585	Apobec3	ENSMUST00000176868	ENSMUSP00000135706	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	1.1	0	38	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000176823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009585	Apobec3	ENSMUST00000165537	ENSMUSP00000132391	TRANSLATION	protein_coding	-	CCDS27654.1	1	396	10	7.92	0.5	293.9	0	-4,-2	-	-	18	PRINCIPAL:3
ENSMUSG00000009585	Apobec3	ENSMUST00000177350	ENSMUSP00000134938	TRANSLATION	protein_coding	stop	-	5	166	2	2.25	0	103.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000176904	ENSMUSP00000135502	TRANSLATION	protein_coding	stop	-	2	85	2	1.75	0	94.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000176325	ENSMUSP00000134838	TRANSLATION	protein_coding	-	-	1	430	10	7.92	0	293.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000009585	Apobec3	ENSMUST00000023054	ENSMUSP00000023054	TRANSLATION	protein_coding	-	CCDS84179.1	1	297	8	6.02	0.5	210.4	0	-4,-6	-	-	7.86	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000177483	ENSMUSP00000135011	TRANSLATION	protein_coding	stop	-	5	151	2	2.77	0	103.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000009585	Apobec3	ENSMUST00000176644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009585	Apobec3	ENSMUST00000230741	ENSMUSP00000155418	TRANSLATION	protein_coding	stop	-	-	62	0	0.56	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068522	Aard	ENSMUST00000090025	ENSMUSP00000087479	TRANSLATION	protein_coding	-	CCDS49603.1	1	167	0	0	1.5	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000029875	Ccdc184	ENSMUST00000031914	ENSMUSP00000031914	TRANSLATION	protein_coding	-	CCDS49718.1	-	191	6	0	4.1	362.1	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000039100	Marchf6	ENSMUST00000226207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039100	Marchf6	ENSMUST00000226868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039100	Marchf6	ENSMUST00000228122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039100	Marchf6	ENSMUST00000090227	ENSMUSP00000087694	TRANSLATION	protein_coding	-	CCDS37054.1	1	909	8	1.816	3.9	53.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022436	Sh3bp1	ENSMUST00000151146	ENSMUSP00000138780	TRANSLATION	nonsense_mediated_decay	-	-	1	209	0	0	0	69.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022436	Sh3bp1	ENSMUST00000001226	ENSMUSP00000001226	TRANSLATION	protein_coding	-	CCDS84176.1	5	680	0	4.23	0.5	264.9	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022436	Sh3bp1	ENSMUST00000229803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022436	Sh3bp1	ENSMUST00000132047	ENSMUSP00000138598	TRANSLATION	nonsense_mediated_decay	-	-	1	587	0	4.23	0	264.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022436	Sh3bp1	ENSMUST00000231057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022436	Sh3bp1	ENSMUST00000109698	ENSMUSP00000105320	TRANSLATION	protein_coding	-	CCDS84177.1	1	584	0	4.23	0.5	264.9	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022436	Sh3bp1	ENSMUST00000061239	ENSMUSP00000052181	TRANSLATION	protein_coding	-	CCDS27626.1	1	582	0	4.23	0.5	264.9	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000022436	Sh3bp1	ENSMUST00000229492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022436	Sh3bp1	ENSMUST00000148893	ENSMUSP00000117839	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037487	Ubr5	ENSMUST00000228804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000228292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000226414	ENSMUSP00000154293	TRANSLATION	protein_coding	-	CCDS49595.1	-	2798	4	8.91	6.5	395.8	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000037487	Ubr5	ENSMUST00000226629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000228333	ENSMUSP00000154132	TRANSLATION	nonsense_mediated_decay	start	-	-	101	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037487	Ubr5	ENSMUST00000228504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037487	Ubr5	ENSMUST00000227143	ENSMUSP00000153778	TRANSLATION	protein_coding	start	-	-	142	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037487	Ubr5	ENSMUST00000226369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000110336	ENSMUSP00000105965	TRANSLATION	protein_coding	-	-	5	2792	4	8.91	5.3	395.8	0	-4,-5	-	-	17.564	ALTERNATIVE:1
ENSMUSG00000037487	Ubr5	ENSMUST00000228174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000228029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000226137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000228101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037487	Ubr5	ENSMUST00000228368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019146	Cacng2	ENSMUST00000019290	ENSMUSP00000019290	TRANSLATION	protein_coding	-	CCDS27608.1	1	323	0	3.75	15.7	194.3	0	-1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000022315	Slc30a8	ENSMUST00000037240	ENSMUSP00000035257	TRANSLATION	protein_coding	-	CCDS27464.1	1	367	0	0	5.1	152.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000058057	Mettl7a3	ENSMUST00000075420	ENSMUSP00000074875	TRANSLATION	protein_coding	-	CCDS37209.1	1	244	17	0.68	1.5	74.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000035845	Alg12	ENSMUST00000162183	ENSMUSP00000123935	TRANSLATION	protein_coding	-	CCDS49694.1	1	486	0	0	1.5	142.5	11	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000035845	Alg12	ENSMUST00000043087	ENSMUSP00000043480	TRANSLATION	protein_coding	-	CCDS27732.1	1	385	0	0	0.5	45.9	11	0,-3	-	-	0.204	MINOR
ENSMUSG00000035845	Alg12	ENSMUST00000159328	ENSMUSP00000125534	TRANSLATION	protein_coding	stop	-	3	171	0	0	0	49.6	7	0,-3	-	-	-1	MINOR
ENSMUSG00000035845	Alg12	ENSMUST00000160222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036218	Pdzrn4	ENSMUST00000229173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036218	Pdzrn4	ENSMUST00000229577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036218	Pdzrn4	ENSMUST00000035399	ENSMUSP00000040456	TRANSLATION	protein_coding	-	CCDS49710.1	1	775	0	4.15	6.3	54.8	0	-4,-5	-	-	7.01	MINOR
ENSMUSG00000036218	Pdzrn4	ENSMUST00000169942	ENSMUSP00000133159	TRANSLATION	protein_coding	-	CCDS49709.1	1	1014	7	5.9	0.5	113	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000018040	Rrp7a	ENSMUST00000167483	ENSMUSP00000128380	TRANSLATION	nonsense_mediated_decay	-	-	3	163	0	0.45	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018040	Rrp7a	ENSMUST00000166019	ENSMUSP00000129142	TRANSLATION	protein_coding	stop	-	2	145	0	0.36	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000018040	Rrp7a	ENSMUST00000167589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018040	Rrp7a	ENSMUST00000166766	ENSMUSP00000127001	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	1.35	0	63.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000018040	Rrp7a	ENSMUST00000018184	ENSMUSP00000018184	TRANSLATION	protein_coding	-	CCDS27696.1	1	280	0	2.39	2.7	129.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022577	Ly6h	ENSMUST00000023241	ENSMUSP00000023241	TRANSLATION	protein_coding	-	CCDS49640.1	2	139	0	0	7.5	67.8	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000022577	Ly6h	ENSMUST00000163116	ENSMUSP00000130781	TRANSLATION	protein_coding	-	CCDS49640.1	2	139	0	0	7.5	67.8	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000022577	Ly6h	ENSMUST00000156032	ENSMUSP00000122878	TRANSLATION	protein_coding	-	CCDS27544.1	3	160	0	0	5.1	67.8	0	0,2	-	-	7.893	MINOR
ENSMUSG00000022577	Ly6h	ENSMUST00000126129	ENSMUSP00000121951	TRANSLATION	nonsense_mediated_decay	-	-	5	139	0	0	7.5	67.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022577	Ly6h	ENSMUST00000127095	ENSMUSP00000122061	TRANSLATION	protein_coding	-	CCDS27544.1	1	160	0	0	5.1	67.8	0	0,2	-	-	7.893	MINOR
ENSMUSG00000022577	Ly6h	ENSMUST00000065417	ENSMUSP00000070646	TRANSLATION	protein_coding	-	CCDS49640.1	2	139	0	0	7.5	67.8	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000022577	Ly6h	ENSMUST00000228961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022577	Ly6h	ENSMUST00000150125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022414	Tab1	ENSMUST00000230479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022414	Tab1	ENSMUST00000229320	ENSMUSP00000155204	TRANSLATION	nonsense_mediated_decay	start	-	-	105	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000022414	Tab1	ENSMUST00000023050	ENSMUSP00000023050	TRANSLATION	protein_coding	-	CCDS27659.1	1	502	3	10.38	14.8	138	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000040420	Cdh18	ENSMUST00000170626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040420	Cdh18	ENSMUST00000163361	ENSMUSP00000129170	TRANSLATION	protein_coding	stop	-	5	337	30	4.93	0	149.7	0	1,-2	-	-	-1	MINOR
ENSMUSG00000040420	Cdh18	ENSMUST00000226693	ENSMUSP00000153905	TRANSLATION	protein_coding	-	-	-	575	52	8.21	7.5	235.1	0	1,-2	-	-	8.376	MINOR
ENSMUSG00000040420	Cdh18	ENSMUST00000040427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040420	Cdh18	ENSMUST00000165614	ENSMUSP00000128643	TRANSLATION	protein_coding	-	-	5	574	52	7.93	7.5	235.1	0	1,-2	-	-	7.818	MINOR
ENSMUSG00000040420	Cdh18	ENSMUST00000167623	ENSMUSP00000128011	TRANSLATION	protein_coding	start	-	5	441	44	6.43	0	232.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040420	Cdh18	ENSMUST00000164787	ENSMUSP00000130851	TRANSLATION	protein_coding	-	CCDS49585.1	5	790	53	10.63	14.8	446.2	0	1,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000036698	Ago2	ENSMUST00000044113	ENSMUSP00000042207	TRANSLATION	protein_coding	-	CCDS37098.1	1	860	20	17.75	5.2	822.2	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000036698	Ago2	ENSMUST00000230464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036698	Ago2	ENSMUST00000230158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075604	Cyp11b1	ENSMUST00000170259	ENSMUSP00000127888	TRANSLATION	protein_coding	-	CCDS27535.1	1	501	36	8.55	0.5	360.1	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000035805	Mlc1	ENSMUST00000109368	ENSMUSP00000104993	TRANSLATION	protein_coding	-	-	1	388	0	0	0	0	2	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000035805	Mlc1	ENSMUST00000042594	ENSMUSP00000047667	TRANSLATION	protein_coding	-	CCDS37173.1	1	382	0	0	0.5	0	2	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000063522	Ly6m	ENSMUST00000077004	ENSMUSP00000076264	TRANSLATION	protein_coding	-	CCDS27537.1	1	111	0	0	0.5	61.9	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000063522	Ly6m	ENSMUST00000190826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079018	Ly6c1	ENSMUST00000065408	ENSMUSP00000066954	TRANSLATION	protein_coding	-	CCDS27541.1	1	131	0	0	0.5	55.7	0	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000079018	Ly6c1	ENSMUST00000185372	ENSMUSP00000139948	TRANSLATION	protein_coding	stop	-	3	78	0	0	0.5	28.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000079018	Ly6c1	ENSMUST00000188845	ENSMUSP00000139559	TRANSLATION	protein_coding	-	CCDS79375.1	3	147	0	0	0.5	55.7	0	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000079018	Ly6c1	ENSMUST00000179762	ENSMUSP00000137401	TRANSLATION	protein_coding	-	CCDS27541.1	1	131	0	0	0.5	55.7	0	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000079018	Ly6c1	ENSMUST00000187347	ENSMUSP00000139799	TRANSLATION	protein_coding	-	CCDS27541.1	2	131	0	0	0.5	55.7	0	2,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000079018	Ly6c1	ENSMUST00000191216	ENSMUSP00000140722	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	55.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000079018	Ly6c1	ENSMUST00000185200	ENSMUSP00000140622	TRANSLATION	protein_coding	-	CCDS79376.1	2	81	0	0	0.5	28.8	0	3,-2	-	-	3.102	MINOR
ENSMUSG00000022387	Brd1	ENSMUST00000156155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022387	Brd1	ENSMUST00000109381	ENSMUSP00000105007	TRANSLATION	protein_coding	-	CCDS27730.2	5	1189	18	5.8	6.3	434	0	-4,-1	-	-	20.445	PRINCIPAL:2
ENSMUSG00000022387	Brd1	ENSMUST00000109380	ENSMUSP00000105006	TRANSLATION	protein_coding	-	-	5	1058	18	5.8	7.5	434	0	-4,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000022387	Brd1	ENSMUST00000088911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022387	Brd1	ENSMUST00000150004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022387	Brd1	ENSMUST00000139515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022359	Wdyhv1	ENSMUST00000226889	ENSMUSP00000154176	TRANSLATION	protein_coding	-	-	-	83	0	2.2	0	70.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022359	Wdyhv1	ENSMUST00000226425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022359	Wdyhv1	ENSMUST00000228693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022359	Wdyhv1	ENSMUST00000227142	ENSMUSP00000154671	TRANSLATION	protein_coding	-	-	-	192	0	4.2	0.5	207.2	0	-4,-5	-	-	8.292	MINOR
ENSMUSG00000022359	Wdyhv1	ENSMUST00000067563	ENSMUSP00000064622	TRANSLATION	protein_coding	-	CCDS27490.1	1	209	0	5.2	7.5	235.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022359	Wdyhv1	ENSMUST00000227615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022359	Wdyhv1	ENSMUST00000226955	ENSMUSP00000154254	TRANSLATION	protein_coding	-	-	-	80	0	1.7	1.5	50.6	0	-4,-5	-	-	0.231	MINOR
ENSMUSG00000022359	Wdyhv1	ENSMUST00000227048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022359	Wdyhv1	ENSMUST00000228761	ENSMUSP00000153923	TRANSLATION	nonsense_mediated_decay	-	-	-	82	0	2.2	0	71.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022560	Slc52a2	ENSMUST00000230994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022560	Slc52a2	ENSMUST00000023220	ENSMUSP00000023220	TRANSLATION	protein_coding	-	CCDS27575.1	1	450	0	0	1.5	120.4	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000061740	Cyp2d22	ENSMUST00000023083	ENSMUSP00000023083	TRANSLATION	protein_coding	-	CCDS37159.1	1	500	36	9.75	1.5	458.1	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061740	Cyp2d22	ENSMUST00000230663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061740	Cyp2d22	ENSMUST00000229599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061740	Cyp2d22	ENSMUST00000229438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061740	Cyp2d22	ENSMUST00000228986	ENSMUSP00000155368	TRANSLATION	protein_coding	start/stop	-	-	240	21	5	0	256.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000061740	Cyp2d22	ENSMUST00000230370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072511	Hhla1	ENSMUST00000100584	ENSMUSP00000098149	TRANSLATION	protein_coding	-	CCDS49618.1	1	514	0	0	0.5	0	0	1,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000072511	Hhla1	ENSMUST00000239034	ENSMUSP00000159116	TRANSLATION	protein_coding	-	-	-	540	0	0	0	0	0	1,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000115987	Vps28	ENSMUST00000229052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115987	Vps28	ENSMUST00000229261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115987	Vps28	ENSMUST00000229545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115987	Vps28	ENSMUST00000078803	ENSMUSP00000077856	TRANSLATION	protein_coding	-	CCDS27579.1	1	221	0	4.58	17.5	226.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000115987	Vps28	ENSMUST00000229019	ENSMUSP00000155847	TRANSLATION	protein_coding	-	-	-	183	0	4.38	3	226.8	0	-4,-5	-	-	12.082	MINOR
ENSMUSG00000023017	Asic1	ENSMUST00000228185	ENSMUSP00000154379	TRANSLATION	protein_coding	-	-	-	559	0	7.41	1.5	329.7	0	-4,-6	-	-	7.48	MINOR
ENSMUSG00000023017	Asic1	ENSMUST00000226291	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023017	Asic1	ENSMUST00000227670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023017	Asic1	ENSMUST00000228610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023017	Asic1	ENSMUST00000228012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023017	Asic1	ENSMUST00000023758	ENSMUSP00000023758	TRANSLATION	protein_coding	-	CCDS27826.1	1	526	0	8.85	13.5	359.7	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000055024	Ep300	ENSMUST00000189338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055024	Ep300	ENSMUST00000206833	ENSMUSP00000146251	TRANSLATION	protein_coding	start	-	-	46	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055024	Ep300	ENSMUST00000187776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055024	Ep300	ENSMUST00000206936	ENSMUSP00000145639	TRANSLATION	protein_coding	start/stop	-	5	133	0	1	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055024	Ep300	ENSMUST00000185967	ENSMUSP00000139889	TRANSLATION	protein_coding	start/stop	-	3	187	0	2.2	0	99.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055024	Ep300	ENSMUST00000206431	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055024	Ep300	ENSMUST00000205816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055024	Ep300	ENSMUST00000190035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055024	Ep300	ENSMUST00000068387	ENSMUSP00000066789	TRANSLATION	protein_coding	-	CCDS37149.1	1	2412	12	18.55	0.5	794.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055024	Ep300	ENSMUST00000185375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052414	Gm28047	ENSMUST00000184772	ENSMUSP00000138975	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	414	3	3.5	0	47	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000047641	Krt87	ENSMUST00000081945	ENSMUSP00000080613	TRANSLATION	protein_coding	-	CCDS27852.1	1	495	0	4.85	1.5	358.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000022603	Mroh4	ENSMUST00000023271	ENSMUSP00000023271	TRANSLATION	protein_coding	-	CCDS49636.1	1	983	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000022603	Mroh4	ENSMUST00000175931	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022603	Mroh4	ENSMUST00000176767	ENSMUSP00000158942	TRANSLATION	protein_coding	start/stop	-	5	385	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022603	Mroh4	ENSMUST00000137963	ENSMUSP00000117011	TRANSLATION	protein_coding	-	-	1	914	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000022603	Mroh4	ENSMUST00000176592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022603	Mroh4	ENSMUST00000177179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032988	Slc16a8	ENSMUST00000230477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032988	Slc16a8	ENSMUST00000039752	ENSMUSP00000040522	TRANSLATION	protein_coding	-	CCDS27636.1	1	492	0	0	0.5	92	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000003882	Il7r	ENSMUST00000228782	ENSMUSP00000154530	TRANSLATION	protein_coding	-	-	-	286	0	4.65	0	28.2	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000003882	Il7r	ENSMUST00000003981	ENSMUSP00000003981	TRANSLATION	protein_coding	-	CCDS27376.1	1	459	0	4.65	0.5	28.2	1	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000003882	Il7r	ENSMUST00000228673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003882	Il7r	ENSMUST00000227234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000934	Top1mt	ENSMUST00000230774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000934	Top1mt	ENSMUST00000000958	ENSMUSP00000000958	TRANSLATION	protein_coding	-	CCDS27547.1	1	593	5	12.55	1.5	740.8	0	-4,0	-	-	17	PRINCIPAL:1
ENSMUSG00000000934	Top1mt	ENSMUST00000230469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041708	Mpped1	ENSMUST00000109469	ENSMUSP00000105095	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000163723	ENSMUSP00000126242	TRANSLATION	protein_coding	-	-	5	168	10	4.58	2.9	0	0	-4,-5	-	-	3.59	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000172398	ENSMUSP00000131333	TRANSLATION	protein_coding	-	-	3	202	4	2.61	0	0	0	-2,-4	-	-	0	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000109470	ENSMUSP00000105096	TRANSLATION	protein_coding	-	CCDS37164.1	1	326	15	7.99	5.1	43.9	0	-2,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000041708	Mpped1	ENSMUST00000150489	ENSMUSP00000128786	TRANSLATION	protein_coding	start/stop	-	3	220	6	3.91	0	29.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000123387	ENSMUSP00000123230	TRANSLATION	nonsense_mediated_decay	-	-	5	163	3	2.66	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000046168	ENSMUSP00000041981	TRANSLATION	protein_coding	-	CCDS37164.1	1	326	15	7.99	5.1	43.9	0	-2,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000041708	Mpped1	ENSMUST00000148868	ENSMUSP00000131679	TRANSLATION	protein_coding	stop	-	3	203	9	4.08	0	24.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000125739	ENSMUSP00000131463	TRANSLATION	protein_coding	stop	-	3	152	10	4.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000172115	ENSMUSP00000132518	TRANSLATION	protein_coding	-	-	3	209	4	2.66	0	0	0	-2,-4	-	-	0	MINOR
ENSMUSG00000041708	Mpped1	ENSMUST00000171560	ENSMUSP00000125835	TRANSLATION	nonsense_mediated_decay	start	-	1	154	5	3.08	0	30.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022558	Mroh1	ENSMUST00000160525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000161683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000160631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022558	Mroh1	ENSMUST00000160986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000161265	ENSMUSP00000124978	TRANSLATION	nonsense_mediated_decay	start	-	5	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022558	Mroh1	ENSMUST00000160806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000161962	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022558	Mroh1	ENSMUST00000160728	ENSMUSP00000124321	TRANSLATION	protein_coding	stop	-	2	111	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022558	Mroh1	ENSMUST00000092595	ENSMUSP00000090256	TRANSLATION	protein_coding	-	CCDS49652.1	1	1094	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000022558	Mroh1	ENSMUST00000162319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022558	Mroh1	ENSMUST00000161305	ENSMUSP00000154882	TRANSLATION	protein_coding	-	CCDS49652.1	5	1094	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000022558	Mroh1	ENSMUST00000096385	ENSMUSP00000094115	TRANSLATION	protein_coding	-	CCDS49651.1	1	1640	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:4
ENSMUSG00000022558	Mroh1	ENSMUST00000161350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000162204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022558	Mroh1	ENSMUST00000161352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075602	Ly6a	ENSMUST00000190188	ENSMUSP00000139488	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000075602	Ly6a	ENSMUST00000189068	ENSMUSP00000140638	TRANSLATION	protein_coding	-	CCDS27540.1	5	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000075602	Ly6a	ENSMUST00000186526	ENSMUSP00000140998	TRANSLATION	protein_coding	-	CCDS27540.1	2	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000075602	Ly6a	ENSMUST00000187171	ENSMUSP00000140099	TRANSLATION	protein_coding	-	CCDS27540.1	1	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000075602	Ly6a	ENSMUST00000187994	ENSMUSP00000140287	TRANSLATION	protein_coding	-	CCDS27540.1	1	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000075602	Ly6a	ENSMUST00000023248	ENSMUSP00000023248	TRANSLATION	protein_coding	-	CCDS27540.1	1	134	0	0	0.5	65.4	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022366	Slc22a22	ENSMUST00000110196	ENSMUSP00000105825	TRANSLATION	protein_coding	-	CCDS27481.1	1	554	0	3.4	1.5	88.2	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022366	Slc22a22	ENSMUST00000022995	ENSMUSP00000022995	TRANSLATION	protein_coding	-	CCDS27481.1	1	554	0	3.4	1.5	88.2	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022366	Slc22a22	ENSMUST00000137764	ENSMUSP00000123667	TRANSLATION	protein_coding	stop	-	3	173	0	0.6	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000022589	Cyp11b2	ENSMUST00000238900	ENSMUSP00000158954	TRANSLATION	protein_coding	-	-	-	500	36	8.55	1.5	381.6	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000022589	Cyp11b2	ENSMUST00000167634	ENSMUSP00000131503	TRANSLATION	protein_coding	-	CCDS27536.2	1	502	36	8.55	1.5	381.6	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000091650	Apol11a	ENSMUST00000172191	ENSMUSP00000132565	TRANSLATION	protein_coding	-	CCDS49661.1	5	334	0	0	0.5	293.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046380	Jrk	ENSMUST00000050234	ENSMUSP00000051842	TRANSLATION	protein_coding	-	CCDS27524.1	1	557	0	0	1.5	288.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059586	Nsmce2	ENSMUST00000079703	ENSMUSP00000078641	TRANSLATION	protein_coding	-	CCDS27498.1	1	247	4	2.4	5.1	65.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000059586	Nsmce2	ENSMUST00000227173	ENSMUSP00000154811	TRANSLATION	protein_coding	-	-	-	273	4	2.4	2.7	65.3	0	-4,-1	-	-	16.83	MINOR
ENSMUSG00000059586	Nsmce2	ENSMUST00000168722	ENSMUSP00000128893	TRANSLATION	protein_coding	-	CCDS49611.1	1	139	0	0	1.5	0	0	-4,-1	-	-	0.244	MINOR
ENSMUSG00000078937	Cpt1b	ENSMUST00000168376	ENSMUSP00000129786	TRANSLATION	protein_coding	stop	-	3	54	0	1.066	0	98.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078937	Cpt1b	ENSMUST00000168879	ENSMUSP00000128188	TRANSLATION	nonsense_mediated_decay	start	-	3	151	3	2.76	0	119.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000078937	Cpt1b	ENSMUST00000165419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078937	Cpt1b	ENSMUST00000109313	ENSMUSP00000104936	TRANSLATION	protein_coding	-	CCDS27749.1	1	772	27	11.874	6.3	743.9	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000102018	Iqank1	ENSMUST00000230169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102018	Iqank1	ENSMUST00000185762	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102018	Iqank1	ENSMUST00000187868	ENSMUSP00000146582	TRANSLATION	protein_coding	-	-	5	572	0	3.52	0	58.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000102018	Iqank1	ENSMUST00000187976	ENSMUSP00000140297	TRANSLATION	protein_coding	start	-	5	182	0	2.5	0	40.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102018	Iqank1	ENSMUST00000187060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102018	Iqank1	ENSMUST00000185810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063727	Tnfrsf11b	ENSMUST00000079772	ENSMUSP00000078705	TRANSLATION	protein_coding	-	CCDS27468.1	1	401	3	2.36	6.3	115.3	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000022350	Washc5	ENSMUST00000022976	ENSMUSP00000022976	TRANSLATION	protein_coding	-	CCDS37083.1	1	1159	0	0	14.8	1657.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022350	Washc5	ENSMUST00000227725	ENSMUSP00000154441	TRANSLATION	protein_coding	-	-	-	709	0	0	0	937.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044250	Pced1b	ENSMUST00000228521	ENSMUSP00000154814	TRANSLATION	protein_coding	-	CCDS27781.1	-	433	0	0	0.5	27.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044250	Pced1b	ENSMUST00000059433	ENSMUSP00000055485	TRANSLATION	protein_coding	-	CCDS27781.1	1	433	0	0	0.5	27.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044250	Pced1b	ENSMUST00000226495	ENSMUSP00000154203	TRANSLATION	protein_coding	stop	-	-	89	0	0	0	27.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044250	Pced1b	ENSMUST00000226615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039458	Mtmr12	ENSMUST00000038172	ENSMUSP00000041227	TRANSLATION	protein_coding	-	CCDS27388.1	1	747	0	6.775	0.5	304.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039458	Mtmr12	ENSMUST00000174160	ENSMUSP00000134293	TRANSLATION	nonsense_mediated_decay	-	-	1	526	0	5.995	0	169.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039458	Mtmr12	ENSMUST00000173071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039458	Mtmr12	ENSMUST00000071993	ENSMUSP00000071883	TRANSLATION	protein_coding	-	-	1	437	0	3.51	0	296.4	0	-4,-7	-	-	5.508	MINOR
ENSMUSG00000039458	Mtmr12	ENSMUST00000174418	ENSMUSP00000133285	TRANSLATION	nonsense_mediated_decay	-	-	1	159	0	1.11	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022385	Gtse1	ENSMUST00000231074	ENSMUSP00000155552	TRANSLATION	protein_coding	-	CCDS27725.1	-	741	0	0	0.5	195.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022385	Gtse1	ENSMUST00000170629	ENSMUSP00000128759	TRANSLATION	protein_coding	-	CCDS27725.1	1	741	0	0	0.5	195.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000097050	Gm9918	ENSMUST00000181801	ENSMUSP00000148664	TRANSLATION	protein_coding	-	-	1	174	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000022369	Mtbp	ENSMUST00000170046	ENSMUSP00000129396	TRANSLATION	protein_coding	-	CCDS49609.1	1	629	0	0	0.5	899.3	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022369	Mtbp	ENSMUST00000169667	ENSMUSP00000128615	TRANSLATION	protein_coding	-	-	1	521	5	0	0	754.2	0	-4,-5	-	-	5	MINOR
ENSMUSG00000022369	Mtbp	ENSMUST00000171146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022369	Mtbp	ENSMUST00000166449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022369	Mtbp	ENSMUST00000022998	ENSMUSP00000022998	TRANSLATION	protein_coding	-	CCDS27478.1	1	894	5	0	0.5	1302	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000022369	Mtbp	ENSMUST00000169517	ENSMUSP00000131887	TRANSLATION	nonsense_mediated_decay	start	-	5	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063971	Krt88	ENSMUST00000023781	ENSMUSP00000023781	TRANSLATION	protein_coding	-	CCDS37217.1	1	171	0	1.932	0.5	79.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022550	Adck5	ENSMUST00000162503	ENSMUSP00000125055	TRANSLATION	protein_coding	-	CCDS27576.2	5	582	0	2.795	5.1	122.2	2	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000022550	Adck5	ENSMUST00000161732	ENSMUSP00000125482	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	0	0	0	2	-4,0	-	-	-1	MINOR
ENSMUSG00000022550	Adck5	ENSMUST00000159949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022550	Adck5	ENSMUST00000159049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000160296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022550	Adck5	ENSMUST00000160410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000160094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000162254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000161612	ENSMUSP00000124701	TRANSLATION	nonsense_mediated_decay	-	-	5	129	0	0	0	0	2	-4,0	-	-	-1	MINOR
ENSMUSG00000022550	Adck5	ENSMUST00000229007	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022550	Adck5	ENSMUST00000160784	ENSMUSP00000124666	TRANSLATION	protein_coding	-	-	5	567	0	2.795	0	122.2	2	-4,0	-	-	12	MINOR
ENSMUSG00000022550	Adck5	ENSMUST00000162139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000161783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000161311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022550	Adck5	ENSMUST00000159005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044636	Csrnp2	ENSMUST00000061457	ENSMUSP00000052144	TRANSLATION	protein_coding	-	CCDS27839.1	1	534	8	0	1.5	342	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001661	Hoxc6	ENSMUST00000173421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001661	Hoxc6	ENSMUST00000001711	ENSMUSP00000001711	TRANSLATION	protein_coding	-	CCDS27895.1	1	235	0	1	7.5	73.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000001661	Hoxc6	ENSMUST00000173210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054855	Rnd1	ENSMUST00000120997	ENSMUSP00000113830	TRANSLATION	protein_coding	-	-	1	168	20	4	0	106.9	0	-4,-7	-	-	13.092	MINOR
ENSMUSG00000054855	Rnd1	ENSMUST00000003451	ENSMUSP00000003451	TRANSLATION	protein_coding	-	CCDS27801.1	1	232	23	5	14.2	122.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000054855	Rnd1	ENSMUST00000109149	ENSMUSP00000104777	TRANSLATION	protein_coding	-	-	1	187	23	4.4	0	106.9	0	-4,-7	-	-	15.888	MINOR
ENSMUSG00000068252	Apol7b	ENSMUST00000149824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068252	Apol7b	ENSMUST00000089469	ENSMUSP00000086894	TRANSLATION	protein_coding	-	CCDS27600.1	1	369	0	0	1.5	401.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000068252	Apol7b	ENSMUST00000229434	ENSMUSP00000154906	TRANSLATION	protein_coding	stop	-	-	188	0	0	0	206.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041852	Tcf20	ENSMUST00000229547	ENSMUSP00000154966	TRANSLATION	protein_coding	stop	-	-	152	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041852	Tcf20	ENSMUST00000230403	ENSMUSP00000155055	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041852	Tcf20	ENSMUST00000229439	ENSMUSP00000155508	TRANSLATION	protein_coding	stop	-	-	39	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041852	Tcf20	ENSMUST00000048966	ENSMUSP00000048486	TRANSLATION	protein_coding	-	CCDS27693.1	1	1965	7	0	0.5	32.7	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000041852	Tcf20	ENSMUST00000109510	ENSMUSP00000105136	TRANSLATION	protein_coding	-	CCDS49681.1	1	1987	7	0	0.5	32.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000023047	Amhr2	ENSMUST00000023809	ENSMUSP00000023809	TRANSLATION	protein_coding	-	CCDS27882.1	1	568	22	5.15	0.5	107	1	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000023047	Amhr2	ENSMUST00000229566	ENSMUSP00000155001	TRANSLATION	protein_coding	stop	-	-	61	3	0	0	21.2	0	1,-3	-	-	-1	MINOR
ENSMUSG00000023047	Amhr2	ENSMUST00000161376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023047	Amhr2	ENSMUST00000229278	ENSMUSP00000154968	TRANSLATION	protein_coding	-	-	-	448	22	3.8	0	95	1	2,-3	-	-	14.58	MINOR
ENSMUSG00000023047	Amhr2	ENSMUST00000162893	ENSMUSP00000123735	TRANSLATION	protein_coding	start	-	5	190	4	2.55	0	29.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000044216	Kcnj4	ENSMUST00000057801	ENSMUSP00000094075	TRANSLATION	protein_coding	-	CCDS27641.1	1	445	0	0.8	1.7	508.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000081534	Slc48a1	ENSMUST00000117892	ENSMUSP00000112644	TRANSLATION	protein_coding	-	CCDS49715.1	1	146	0	0	7.5	97.5	6	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000081534	Slc48a1	ENSMUST00000230531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081534	Slc48a1	ENSMUST00000135073	ENSMUSP00000122485	TRANSLATION	nonsense_mediated_decay	-	-	3	60	0	0	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000081534	Slc48a1	ENSMUST00000229084	ENSMUSP00000155411	TRANSLATION	protein_coding	start	-	-	88	0	0	0	55.7	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000044678	Ly6k	ENSMUST00000060301	ENSMUSP00000052599	TRANSLATION	protein_coding	-	CCDS27532.1	1	154	0	0.92	0.5	23.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044678	Ly6k	ENSMUST00000168815	ENSMUSP00000132129	TRANSLATION	protein_coding	-	CCDS27532.1	1	154	0	0.92	0.5	23.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022150	Dab2	ENSMUST00000160134	ENSMUSP00000125021	TRANSLATION	protein_coding	-	-	5	236	6	4.33	0	35.9	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000080880	ENSMUSP00000079689	TRANSLATION	protein_coding	-	CCDS37029.1	1	766	6	4.53	1.5	33.4	0	-4,-5	-	-	17.58	PRINCIPAL:4
ENSMUSG00000022150	Dab2	ENSMUST00000159490	ENSMUSP00000124145	TRANSLATION	protein_coding	stop	-	3	60	1	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022150	Dab2	ENSMUST00000162140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022150	Dab2	ENSMUST00000163082	ENSMUSP00000124996	TRANSLATION	protein_coding	start	-	5	634	2	2.28	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022150	Dab2	ENSMUST00000161040	ENSMUSP00000124478	TRANSLATION	protein_coding	-	-	1	235	6	4.33	0	35.9	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000078019	ENSMUSP00000077166	TRANSLATION	protein_coding	-	CCDS37030.1	1	548	6	4.53	0.5	33.4	0	-4,-5	-	-	17.58	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000161558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022150	Dab2	ENSMUST00000110664	ENSMUSP00000106292	TRANSLATION	protein_coding	-	CCDS79357.1	5	745	6	4.53	0.5	33.4	0	-4,-5	-	-	17.58	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000162094	ENSMUSP00000125696	TRANSLATION	protein_coding	stop	-	5	110	4	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022150	Dab2	ENSMUST00000110663	ENSMUSP00000106291	TRANSLATION	protein_coding	-	CCDS37030.1	1	548	6	4.53	0.5	33.4	0	-4,-5	-	-	17.58	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000159552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022150	Dab2	ENSMUST00000161812	ENSMUSP00000124589	TRANSLATION	protein_coding	-	CCDS49576.1	1	527	6	4.53	0.5	35.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022150	Dab2	ENSMUST00000159046	ENSMUSP00000125452	TRANSLATION	protein_coding	stop	-	3	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068083	Cyp2d40	ENSMUST00000230433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068083	Cyp2d40	ENSMUST00000055721	ENSMUSP00000060524	TRANSLATION	protein_coding	-	CCDS37162.1	1	338	27	5	0.5	312.3	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023045	Soat2	ENSMUST00000023806	ENSMUSP00000023806	TRANSLATION	protein_coding	-	CCDS27872.1	1	525	0	0	1.5	197	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023045	Soat2	ENSMUST00000160465	ENSMUSP00000124628	TRANSLATION	nonsense_mediated_decay	start	-	5	284	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000022365	Derl1	ENSMUST00000226911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022365	Derl1	ENSMUST00000022993	ENSMUSP00000022993	TRANSLATION	protein_coding	-	CCDS27484.1	1	251	0	0	12.8	247.3	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000022613	Miox	ENSMUST00000160491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022613	Miox	ENSMUST00000162756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022613	Miox	ENSMUST00000161437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022613	Miox	ENSMUST00000159381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022613	Miox	ENSMUST00000162033	ENSMUSP00000123732	TRANSLATION	protein_coding	start	-	3	64	7	1	0	58.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022613	Miox	ENSMUST00000023282	ENSMUSP00000023282	TRANSLATION	protein_coding	-	CCDS27745.1	1	285	12	7.58	7.6	402.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035944	Ttc38	ENSMUST00000133158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035944	Ttc38	ENSMUST00000124011	ENSMUSP00000118863	TRANSLATION	nonsense_mediated_decay	-	-	2	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035944	Ttc38	ENSMUST00000146088	ENSMUSP00000114504	TRANSLATION	protein_coding	-	CCDS27724.2	1	465	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000023044	Csad	ENSMUST00000231029	ENSMUSP00000155282	TRANSLATION	protein_coding	start	-	-	107	1	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230656	ENSMUSP00000155633	TRANSLATION	protein_coding	stop	-	-	119	3	3.58	0	43.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023044	Csad	ENSMUST00000229470	ENSMUSP00000155756	TRANSLATION	protein_coding	stop	-	-	150	3	4.66	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023044	Csad	ENSMUST00000230895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023044	Csad	ENSMUST00000230665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023044	Csad	ENSMUST00000231030	ENSMUSP00000155394	TRANSLATION	protein_coding	stop	-	-	150	3	4.66	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023044	Csad	ENSMUST00000229514	ENSMUSP00000155067	TRANSLATION	protein_coding	stop	-	-	162	7	5.16	0	87.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000023805	ENSMUSP00000023805	TRANSLATION	protein_coding	-	CCDS27873.1	1	493	18	14.08	7.5	371.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000023044	Csad	ENSMUST00000230687	ENSMUSP00000155153	TRANSLATION	protein_coding	stop	-	-	210	8	6.83	0	109.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230288	ENSMUSP00000155492	TRANSLATION	protein_coding	-	-	-	463	18	13.08	0.5	356.8	0	-4,-5	-	-	15.108	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000229345	ENSMUSP00000155560	TRANSLATION	protein_coding	stop	-	-	64	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000229770	ENSMUSP00000155075	TRANSLATION	protein_coding	stop	-	-	35	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023044	Csad	ENSMUST00000230708	ENSMUSP00000155265	TRANSLATION	nonsense_mediated_decay	start	-	-	135	9	4	0	117.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230322	ENSMUSP00000155715	TRANSLATION	nonsense_mediated_decay	-	-	-	174	3	5.43	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000229938	ENSMUSP00000155645	TRANSLATION	nonsense_mediated_decay	-	-	-	45	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000231048	ENSMUSP00000155192	TRANSLATION	nonsense_mediated_decay	-	-	-	232	8	6.95	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000230342	ENSMUSP00000155558	TRANSLATION	nonsense_mediated_decay	start	-	-	60	3	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000229252	ENSMUSP00000154991	TRANSLATION	protein_coding	stop	-	-	69	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023044	Csad	ENSMUST00000229043	ENSMUSP00000155509	TRANSLATION	protein_coding	stop	-	-	189	7	6.08	0	93.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023050	Map3k12	ENSMUST00000171565	ENSMUSP00000127629	TRANSLATION	protein_coding	-	CCDS27885.1	1	888	18	6	1.5	206.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023050	Map3k12	ENSMUST00000023812	ENSMUSP00000023812	TRANSLATION	protein_coding	-	CCDS27885.1	1	888	18	6	1.5	206.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023050	Map3k12	ENSMUST00000169162	ENSMUSP00000129251	TRANSLATION	protein_coding	stop	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023050	Map3k12	ENSMUST00000169367	ENSMUSP00000129472	TRANSLATION	protein_coding	stop	-	5	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023050	Map3k12	ENSMUST00000169377	ENSMUSP00000133209	TRANSLATION	protein_coding	-	CCDS27885.1	1	888	18	6	1.5	206.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023050	Map3k12	ENSMUST00000165174	ENSMUSP00000130786	TRANSLATION	protein_coding	stop	-	3	34	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023050	Map3k12	ENSMUST00000164343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023050	Map3k12	ENSMUST00000167677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036944	Tmem71	ENSMUST00000048372	ENSMUSP00000044493	TRANSLATION	protein_coding	-	CCDS37090.1	1	287	0	0	1.5	268.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037458	Azin1	ENSMUST00000065308	ENSMUSP00000065544	TRANSLATION	protein_coding	-	CCDS37065.1	1	448	15	10.58	8.8	352.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000037458	Azin1	ENSMUST00000151319	ENSMUSP00000119201	TRANSLATION	protein_coding	stop	-	2	149	4	4	0	131.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037458	Azin1	ENSMUST00000110328	ENSMUSP00000105957	TRANSLATION	nonsense_mediated_decay	start	-	5	132	3	2.75	0	143.6	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000037458	Azin1	ENSMUST00000127848	ENSMUSP00000114831	TRANSLATION	protein_coding	stop	-	5	46	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037458	Azin1	ENSMUST00000129589	ENSMUSP00000117988	TRANSLATION	nonsense_mediated_decay	-	-	1	154	4	4	0	135.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037458	Azin1	ENSMUST00000152833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037458	Azin1	ENSMUST00000226152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037458	Azin1	ENSMUST00000149293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037458	Azin1	ENSMUST00000110329	ENSMUSP00000105958	TRANSLATION	protein_coding	-	CCDS37065.1	2	448	15	10.58	8.8	352.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022635	Zcrb1	ENSMUST00000159723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022635	Zcrb1	ENSMUST00000076070	ENSMUSP00000075441	TRANSLATION	protein_coding	-	CCDS27766.1	1	217	4	2.96	12.8	96.9	0	-4,-7	-	-	20	PRINCIPAL:3
ENSMUSG00000022635	Zcrb1	ENSMUST00000159719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022635	Zcrb1	ENSMUST00000159105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022635	Zcrb1	ENSMUST00000160407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022635	Zcrb1	ENSMUST00000162160	ENSMUSP00000124549	TRANSLATION	protein_coding	-	CCDS84190.1	1	216	4	2.96	12.8	96.9	0	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000022635	Zcrb1	ENSMUST00000161409	ENSMUSP00000125442	TRANSLATION	nonsense_mediated_decay	-	-	1	66	0	1.08	0	30.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022635	Zcrb1	ENSMUST00000161955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047878	A4galt	ENSMUST00000229687	ENSMUSP00000155672	TRANSLATION	protein_coding	stop	-	-	82	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000047878	A4galt	ENSMUST00000049530	ENSMUSP00000057999	TRANSLATION	protein_coding	-	CCDS27699.1	1	359	2	0	1.5	249.5	1	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000047878	A4galt	ENSMUST00000229454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047878	A4galt	ENSMUST00000164614	ENSMUSP00000129719	TRANSLATION	protein_coding	-	CCDS27699.1	1	359	2	0	1.5	249.5	1	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000022197	Pdzd2	ENSMUST00000186113	ENSMUSP00000139994	TRANSLATION	protein_coding	stop	-	3	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022197	Pdzd2	ENSMUST00000075317	ENSMUSP00000074788	TRANSLATION	protein_coding	-	CCDS37045.1	5	2796	0	8.24	0.5	222.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022197	Pdzd2	ENSMUST00000191339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022197	Pdzd2	ENSMUST00000189469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022197	Pdzd2	ENSMUST00000187398	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022197	Pdzd2	ENSMUST00000190929	ENSMUSP00000140682	TRANSLATION	protein_coding	stop	-	1	363	0	2	0	55.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022197	Pdzd2	ENSMUST00000185619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022197	Pdzd2	ENSMUST00000189746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022197	Pdzd2	ENSMUST00000189324	ENSMUSP00000140939	TRANSLATION	protein_coding	stop	-	1	36	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022617	Chkb	ENSMUST00000023289	ENSMUSP00000023289	TRANSLATION	protein_coding	-	CCDS27750.1	1	394	26	11.08	6.3	247.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022617	Chkb	ENSMUST00000166267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022617	Chkb	ENSMUST00000170334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022617	Chkb	ENSMUST00000170460	ENSMUSP00000128026	TRANSLATION	protein_coding	start/stop	-	3	176	17	5.33	0	211.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022617	Chkb	ENSMUST00000171666	ENSMUSP00000127191	TRANSLATION	nonsense_mediated_decay	start	-	3	164	12	4.75	0	162	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022617	Chkb	ENSMUST00000165623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022617	Chkb	ENSMUST00000112664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022617	Chkb	ENSMUST00000171140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022617	Chkb	ENSMUST00000115278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048307	Ankrd46	ENSMUST00000228601	ENSMUSP00000154507	TRANSLATION	protein_coding	stop	-	-	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048307	Ankrd46	ENSMUST00000226506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048307	Ankrd46	ENSMUST00000228941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048307	Ankrd46	ENSMUST00000228630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048307	Ankrd46	ENSMUST00000057486	ENSMUSP00000052521	TRANSLATION	protein_coding	-	CCDS27429.1	1	228	0	1.85	19.3	49.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000001076	C1ql4	ENSMUST00000064462	ENSMUSP00000068402	TRANSLATION	protein_coding	-	CCDS27814.1	1	238	0	1.8	1.5	120.2	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000101026	Ly6g6g	ENSMUST00000186014	ENSMUSP00000140350	TRANSLATION	protein_coding	start	-	1	115	0	0	0	30.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000101026	Ly6g6g	ENSMUST00000191407	ENSMUSP00000140804	TRANSLATION	protein_coding	-	-	1	87	0	0	0	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000036046	5031439G07Rik	ENSMUST00000165743	ENSMUSP00000128699	TRANSLATION	protein_coding	-	CCDS27715.1	1	447	0	0	0.5	331.6	0	-2,2	-	-	6	PRINCIPAL:2
ENSMUSG00000036046	5031439G07Rik	ENSMUST00000047144	ENSMUSP00000037011	TRANSLATION	protein_coding	-	-	1	404	0	0	4.6	331.6	0	-4,-2	-	-	7	ALTERNATIVE:1
ENSMUSG00000036046	5031439G07Rik	ENSMUST00000170863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036046	5031439G07Rik	ENSMUST00000124308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022428	Cby1	ENSMUST00000230376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022428	Cby1	ENSMUST00000023064	ENSMUSP00000023064	TRANSLATION	protein_coding	-	CCDS27645.1	1	127	0	0	17.5	165.4	0	-4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000116336	Gm49425	ENSMUST00000230067	ENSMUSP00000155398	TRANSLATION	protein_coding	start	-	-	75	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000033055	Ankrd54	ENSMUST00000125523	ENSMUSP00000120492	TRANSLATION	protein_coding	start	-	3	86	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033055	Ankrd54	ENSMUST00000153003	ENSMUSP00000117852	TRANSLATION	nonsense_mediated_decay	-	-	3	137	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033055	Ankrd54	ENSMUST00000156411	ENSMUSP00000119739	TRANSLATION	protein_coding	start	-	2	83	0	0.9	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033055	Ankrd54	ENSMUST00000151889	ENSMUSP00000114322	TRANSLATION	protein_coding	stop	-	3	200	0	2.44	0	39.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033055	Ankrd54	ENSMUST00000040676	ENSMUSP00000047042	TRANSLATION	protein_coding	-	CCDS37139.1	1	299	0	3.98	2.7	68.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033055	Ankrd54	ENSMUST00000133541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033055	Ankrd54	ENSMUST00000229322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033055	Ankrd54	ENSMUST00000128631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022421	Nptxr	ENSMUST00000023057	ENSMUSP00000023057	TRANSLATION	protein_coding	start	-	1	493	6	1.82	1.5	104	0	-1,-4	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022421	Nptxr	ENSMUST00000175858	ENSMUSP00000135855	TRANSLATION	protein_coding	start	CCDS27653.1	1	493	6	1.82	1.5	104	0	-1,-4	-	-	-1	PRINCIPAL:2
ENSMUSG00000022421	Nptxr	ENSMUST00000125283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087444	Gm5475	ENSMUST00000132119	ENSMUSP00000114783	TRANSLATION	protein_coding	-	-	1	175	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000087444	Gm5475	ENSMUST00000148928	ENSMUSP00000114462	TRANSLATION	protein_coding	-	-	1	103	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036760	Kcnk9	ENSMUST00000044624	ENSMUSP00000038729	TRANSLATION	protein_coding	-	CCDS27515.1	1	402	0	0.88	0.5	126.8	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022620	Arsa	ENSMUST00000165199	ENSMUSP00000127646	TRANSLATION	protein_coding	-	CCDS27753.1	1	506	10	8.25	1.5	350.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022620	Arsa	ENSMUST00000023292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022620	Arsa	ENSMUST00000168270	ENSMUSP00000130574	TRANSLATION	protein_coding	start	-	3	103	0	2.5	0	28	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022620	Arsa	ENSMUST00000168052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038009	Dnajc22	ENSMUST00000146173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038009	Dnajc22	ENSMUST00000061295	ENSMUSP00000055482	TRANSLATION	protein_coding	-	CCDS27815.1	1	339	0	1	1.5	94.9	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000037646	Vps13b	ENSMUST00000227455	ENSMUSP00000153856	TRANSLATION	protein_coding	stop	-	-	46	0	0	0	41.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037646	Vps13b	ENSMUST00000226579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037646	Vps13b	ENSMUST00000228738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037646	Vps13b	ENSMUST00000227309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037646	Vps13b	ENSMUST00000048646	ENSMUSP00000045490	TRANSLATION	protein_coding	-	CCDS49592.1	5	3993	0	0	1.5	215.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037646	Vps13b	ENSMUST00000228338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037646	Vps13b	ENSMUST00000227567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098678	Mroh6	ENSMUST00000184858	ENSMUSP00000139029	TRANSLATION	protein_coding	-	CCDS70637.1	5	722	0	0	1.5	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000072568	Lratd2	ENSMUST00000100635	ENSMUSP00000098200	TRANSLATION	protein_coding	-	CCDS49613.1	1	310	0	0.14	4.1	52.7	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000072568	Lratd2	ENSMUST00000186536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023009	Nckap5l	ENSMUST00000161948	ENSMUSP00000123858	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023009	Nckap5l	ENSMUST00000023747	ENSMUSP00000023747	TRANSLATION	protein_coding	-	CCDS27820.1	1	1323	0	0	1.5	288	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023009	Nckap5l	ENSMUST00000161004	ENSMUSP00000125080	TRANSLATION	protein_coding	start/stop	-	3	112	0	0	0	70	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023009	Nckap5l	ENSMUST00000160500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052253	Zfp622	ENSMUST00000227912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052253	Zfp622	ENSMUST00000061875	ENSMUSP00000059678	TRANSLATION	protein_coding	-	CCDS27400.1	1	476	7	0	0.5	100	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052253	Zfp622	ENSMUST00000226884	ENSMUSP00000153839	TRANSLATION	protein_coding	start/stop	-	-	241	4	0	0	43.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052253	Zfp622	ENSMUST00000227093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022332	Khdrbs3	ENSMUST00000022954	ENSMUSP00000022954	TRANSLATION	protein_coding	-	CCDS27513.1	1	346	0	6.425	8.8	194.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022332	Khdrbs3	ENSMUST00000229683	ENSMUSP00000155136	TRANSLATION	nonsense_mediated_decay	-	-	-	346	0	6.425	8.8	194.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022332	Khdrbs3	ENSMUST00000229234	ENSMUSP00000154887	TRANSLATION	nonsense_mediated_decay	-	-	-	346	0	6.425	8.8	194.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022332	Khdrbs3	ENSMUST00000230847	ENSMUSP00000154871	TRANSLATION	protein_coding	-	-	-	258	0	4.425	0	163.9	0	-4,-5	-	-	6.18	MINOR
ENSMUSG00000022332	Khdrbs3	ENSMUST00000230073	ENSMUSP00000155218	TRANSLATION	protein_coding	stop	-	-	126	0	3.25	0	30.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022332	Khdrbs3	ENSMUST00000229534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000532	Acvr1b	ENSMUST00000000544	ENSMUSP00000000544	TRANSLATION	protein_coding	-	CCDS27846.1	1	505	19	6.6	6.3	200.7	0	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000094112	9330182O14Rik	ENSMUST00000228780	ENSMUSP00000154680	TRANSLATION	protein_coding	-	CCDS56983.1	-	140	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000094112	9330182O14Rik	ENSMUST00000179120	ENSMUSP00000136675	TRANSLATION	protein_coding	-	CCDS56983.1	5	140	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000006378	Gcat	ENSMUST00000006544	ENSMUSP00000006544	TRANSLATION	protein_coding	-	CCDS27630.1	1	416	15	8.73	3.5	237.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000006378	Gcat	ENSMUST00000229276	ENSMUSP00000155003	TRANSLATION	protein_coding	start/stop	-	-	227	12	5.58	0	167.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063260	Syt10	ENSMUST00000029441	ENSMUSP00000029441	TRANSLATION	protein_coding	-	CCDS27756.1	1	523	22	4.15	7.5	174	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000041849	Card6	ENSMUST00000141020	ENSMUSP00000118817	TRANSLATION	protein_coding	stop	-	2	194	0	0.8	0	59.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041849	Card6	ENSMUST00000118365	ENSMUSP00000112833	TRANSLATION	protein_coding	-	CCDS49573.1	5	1175	0	0.8	0.5	59.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022433	Csnk1e	ENSMUST00000156043	ENSMUSP00000116593	TRANSLATION	protein_coding	stop	-	3	60	10	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000230942	ENSMUSP00000155731	TRANSLATION	protein_coding	stop	-	-	112	17	2.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000145740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022433	Csnk1e	ENSMUST00000229510	ENSMUSP00000155186	TRANSLATION	protein_coding	stop	-	-	55	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000136003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022433	Csnk1e	ENSMUST00000127155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022433	Csnk1e	ENSMUST00000144790	ENSMUSP00000115637	TRANSLATION	protein_coding	stop	-	2	141	20	3.91	0	67.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000156513	ENSMUSP00000159272	TRANSLATION	protein_coding	start	-	3	327	6	3.5	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000122044	ENSMUSP00000113096	TRANSLATION	protein_coding	-	CCDS70646.1	1	368	22	7.21	5.3	95.2	0	-4,-6	-	-	19.356	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000135519	ENSMUSP00000122135	TRANSLATION	protein_coding	stop	-	5	118	17	3.08	0	28	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000230599	ENSMUSP00000155317	TRANSLATION	protein_coding	stop	-	-	188	22	4.91	0	87.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022433	Csnk1e	ENSMUST00000120859	ENSMUSP00000113975	TRANSLATION	protein_coding	-	CCDS27640.1	1	416	22	6.91	13.7	95.2	0	-4,-6	-	-	21.4	PRINCIPAL:1
ENSMUSG00000022433	Csnk1e	ENSMUST00000117786	ENSMUSP00000113341	TRANSLATION	protein_coding	-	CCDS27640.1	1	416	22	6.91	13.7	95.2	0	-4,-6	-	-	21.4	PRINCIPAL:1
ENSMUSG00000016763	Scube1	ENSMUST00000229057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016763	Scube1	ENSMUST00000230060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016763	Scube1	ENSMUST00000043634	ENSMUSP00000044835	TRANSLATION	protein_coding	-	CCDS70654.1	1	907	38	7.34	1.7	460.6	0	3,-3	-	-	16.8	MINOR
ENSMUSG00000016763	Scube1	ENSMUST00000076060	ENSMUSP00000075434	TRANSLATION	protein_coding	-	-	1	992	38	8.1	3.9	460.6	0	3,-3	-	-	19.317	MINOR
ENSMUSG00000016763	Scube1	ENSMUST00000016907	ENSMUSP00000016907	TRANSLATION	protein_coding	-	CCDS70655.1	1	1018	38	8.1	7.6	460.6	0	3,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000016763	Scube1	ENSMUST00000144773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016763	Scube1	ENSMUST00000171496	ENSMUSP00000130131	TRANSLATION	protein_coding	-	CCDS49684.1	5	988	38	8.1	5.1	460.6	0	3,-3	-	-	19.863	MINOR
ENSMUSG00000078954	Arhgap8	ENSMUST00000100464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078954	Arhgap8	ENSMUST00000169075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078954	Arhgap8	ENSMUST00000163312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078954	Arhgap8	ENSMUST00000168811	ENSMUSP00000130977	TRANSLATION	protein_coding	-	CCDS27712.1	1	425	0	5.35	1.5	276.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078954	Arhgap8	ENSMUST00000006029	ENSMUSP00000006029	TRANSLATION	protein_coding	-	CCDS27712.1	5	425	0	5.35	1.5	276.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078954	Arhgap8	ENSMUST00000167499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078954	Arhgap8	ENSMUST00000172307	ENSMUSP00000132008	TRANSLATION	protein_coding	-	CCDS27712.1	5	425	0	5.35	1.5	276.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005125	Ndrg1	ENSMUST00000168542	ENSMUSP00000127940	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000166420	ENSMUSP00000127099	TRANSLATION	protein_coding	stop	-	3	141	0	2.728	0	118.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000164070	ENSMUSP00000126091	TRANSLATION	protein_coding	stop	-	5	53	0	0.5	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000164675	ENSMUSP00000130150	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000167817	ENSMUSP00000127075	TRANSLATION	protein_coding	start/stop	-	3	119	0	3.174	0	113.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000168979	ENSMUSP00000126985	TRANSLATION	protein_coding	stop	-	3	174	0	3.768	0	234.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000172447	ENSMUSP00000130281	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000171266	ENSMUSP00000129093	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000170903	ENSMUSP00000127302	TRANSLATION	protein_coding	stop	-	5	157	0	3.268	0	203.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005125	Ndrg1	ENSMUST00000171569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005125	Ndrg1	ENSMUST00000005256	ENSMUSP00000005256	TRANSLATION	protein_coding	-	CCDS37092.1	1	394	0	7.332	5.2	424	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000005125	Ndrg1	ENSMUST00000165966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005125	Ndrg1	ENSMUST00000163496	ENSMUSP00000130584	TRANSLATION	protein_coding	stop	-	5	155	0	2.938	0	200.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036197	Gxylt1	ENSMUST00000230063	ENSMUSP00000155854	TRANSLATION	protein_coding	-	-	-	404	20	1.3	1.5	32.1	0	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000036197	Gxylt1	ENSMUST00000049484	ENSMUSP00000047281	TRANSLATION	protein_coding	-	CCDS27764.1	1	372	20	1.3	0.5	32.1	0	0,-4	-	-	18	PRINCIPAL:3
ENSMUSG00000036197	Gxylt1	ENSMUST00000057896	ENSMUSP00000081947	TRANSLATION	protein_coding	-	CCDS84189.1	5	435	20	1.3	1.5	32.1	0	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000022386	Trmu	ENSMUST00000162491	ENSMUSP00000125704	TRANSLATION	nonsense_mediated_decay	-	-	3	99	9	1.75	0	108.2	0	-2,0	-	-	-1	MINOR
ENSMUSG00000022386	Trmu	ENSMUST00000023019	ENSMUSP00000023019	TRANSLATION	protein_coding	-	CCDS27726.1	1	417	17	7.69	3.9	469.2	0	-2,0	-	-	19	PRINCIPAL:1
ENSMUSG00000022386	Trmu	ENSMUST00000159362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022386	Trmu	ENSMUST00000162339	ENSMUSP00000125266	TRANSLATION	nonsense_mediated_decay	start	-	5	58	3	0.83	0	23.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022386	Trmu	ENSMUST00000159730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022386	Trmu	ENSMUST00000162601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022386	Trmu	ENSMUST00000162010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022386	Trmu	ENSMUST00000161784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022386	Trmu	ENSMUST00000160733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095440	Fignl2	ENSMUST00000213610	ENSMUSP00000150618	TRANSLATION	protein_coding	-	CCDS57012.1	5	644	13	0.4	0.5	69.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095440	Fignl2	ENSMUST00000178140	ENSMUSP00000137256	TRANSLATION	protein_coding	-	CCDS57012.1	-	644	13	0.4	0.5	69.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000036158	Prickle1	ENSMUST00000109255	ENSMUSP00000104878	TRANSLATION	protein_coding	-	CCDS27769.1	1	832	19	1.4	6.3	223.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036158	Prickle1	ENSMUST00000048982	ENSMUSP00000049204	TRANSLATION	protein_coding	-	CCDS27769.1	1	832	19	1.4	6.3	223.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022454	Nell2	ENSMUST00000075275	ENSMUSP00000074751	TRANSLATION	protein_coding	-	CCDS27775.1	1	819	25	4.5	6.3	243.9	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000022454	Nell2	ENSMUST00000229981	ENSMUSP00000155490	TRANSLATION	nonsense_mediated_decay	-	-	-	806	25	4.5	0.5	243.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000022454	Nell2	ENSMUST00000166170	ENSMUSP00000131665	TRANSLATION	protein_coding	-	CCDS27775.1	5	819	25	4.5	6.3	243.9	0	2,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000022454	Nell2	ENSMUST00000229933	ENSMUSP00000155436	TRANSLATION	protein_coding	-	-	-	858	25	4.5	0	243.9	0	2,-3	-	-	18	MINOR
ENSMUSG00000039828	Wdr70	ENSMUST00000227371	ENSMUSP00000154067	TRANSLATION	protein_coding	-	-	-	87	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039828	Wdr70	ENSMUST00000045766	ENSMUSP00000037340	TRANSLATION	protein_coding	-	CCDS37033.1	1	657	0	4.555	0.5	50	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039828	Wdr70	ENSMUST00000226928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022321	Cdh10	ENSMUST00000040562	ENSMUSP00000042199	TRANSLATION	protein_coding	-	CCDS37047.1	1	788	45	9.08	5.1	447.3	1	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000022321	Cdh10	ENSMUST00000176593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022321	Cdh10	ENSMUST00000176409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022321	Cdh10	ENSMUST00000166873	ENSMUSP00000128782	TRANSLATION	protein_coding	-	CCDS37047.1	1	788	45	9.08	5.1	447.3	1	0,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000022321	Cdh10	ENSMUST00000176801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022321	Cdh10	ENSMUST00000176146	ENSMUSP00000135546	TRANSLATION	nonsense_mediated_decay	-	-	5	419	35	5.4	0	170.8	0	0,-3	-	-	-1	MINOR
ENSMUSG00000047591	Mafa	ENSMUST00000062002	ENSMUSP00000054226	TRANSLATION	protein_coding	-	CCDS27549.1	-	359	0	0.6	1.5	185	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023018	Smarcd1	ENSMUST00000230530	ENSMUSP00000155619	TRANSLATION	protein_coding	stop	-	-	175	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023018	Smarcd1	ENSMUST00000229236	ENSMUSP00000155750	TRANSLATION	protein_coding	-	-	-	474	0	2	1.2	84.4	0	-3,-1	-	-	12.098	MINOR
ENSMUSG00000023018	Smarcd1	ENSMUST00000228984	ENSMUSP00000154932	TRANSLATION	protein_coding	stop	-	-	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023018	Smarcd1	ENSMUST00000229845	ENSMUSP00000155667	TRANSLATION	protein_coding	stop	-	-	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023018	Smarcd1	ENSMUST00000229968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023018	Smarcd1	ENSMUST00000230748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023018	Smarcd1	ENSMUST00000023759	ENSMUSP00000023759	TRANSLATION	protein_coding	-	CCDS37204.1	1	515	0	2	5.1	84.4	0	-3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000060735	Rxfp3	ENSMUST00000058007	ENSMUSP00000062741	TRANSLATION	protein_coding	-	CCDS27383.1	-	472	0	0.42	2.9	158.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043501	Lgals2	ENSMUST00000044584	ENSMUSP00000036598	TRANSLATION	protein_coding	-	CCDS37135.1	1	130	8	2.75	2.7	104.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033669	Zfp7	ENSMUST00000230106	ENSMUSP00000155599	TRANSLATION	protein_coding	-	CCDS37124.1	-	685	64	1.4	0.5	366.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033669	Zfp7	ENSMUST00000229831	ENSMUSP00000155815	TRANSLATION	protein_coding	stop	-	-	103	0	1	0	74.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033669	Zfp7	ENSMUST00000023179	ENSMUSP00000023179	TRANSLATION	protein_coding	-	CCDS37124.1	1	685	64	1.4	0.5	366.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033669	Zfp7	ENSMUST00000229990	ENSMUSP00000154942	TRANSLATION	protein_coding	-	-	-	131	0	1	0	73.4	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000033669	Zfp7	ENSMUST00000229729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033669	Zfp7	ENSMUST00000230954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022305	Lrp12	ENSMUST00000228575	ENSMUSP00000154273	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022305	Lrp12	ENSMUST00000110305	ENSMUSP00000105934	TRANSLATION	protein_coding	-	CCDS84168.1	1	839	24	2.2	6.3	293.4	0	0,-4	-	-	20	ALTERNATIVE:1
ENSMUSG00000022305	Lrp12	ENSMUST00000022916	ENSMUSP00000022916	TRANSLATION	protein_coding	-	CCDS27446.1	1	858	24	2.2	6.3	293.4	0	0,-3	-	-	20	PRINCIPAL:3
ENSMUSG00000022305	Lrp12	ENSMUST00000146714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061633	1700029P11Rik	ENSMUST00000074608	ENSMUSP00000074190	TRANSLATION	protein_coding	-	CCDS37152.1	-	150	0	1	3.9	145.9	0	1,4	-	-	13	PRINCIPAL:1
ENSMUSG00000050310	Rictor	ENSMUST00000228266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050310	Rictor	ENSMUST00000226201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050310	Rictor	ENSMUST00000228918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050310	Rictor	ENSMUST00000226181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050310	Rictor	ENSMUST00000061656	ENSMUSP00000051809	TRANSLATION	protein_coding	-	CCDS37032.1	1	1708	0	0	5.3	838.5	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000022594	Lynx1	ENSMUST00000189128	ENSMUSP00000139494	TRANSLATION	protein_coding	stop	-	3	34	0	0.5	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022594	Lynx1	ENSMUST00000189696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022594	Lynx1	ENSMUST00000023259	ENSMUSP00000023259	TRANSLATION	protein_coding	-	CCDS27530.1	1	116	0	2	5.1	27.1	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000022452	Smdt1	ENSMUST00000161892	ENSMUSP00000125120	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022452	Smdt1	ENSMUST00000162705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022452	Smdt1	ENSMUST00000159054	ENSMUSP00000125429	TRANSLATION	protein_coding	-	-	5	71	0	0	0	94.3	2	-4,-1	-	-	4.104	MINOR
ENSMUSG00000022452	Smdt1	ENSMUST00000160994	ENSMUSP00000155174	TRANSLATION	protein_coding	-	-	3	45	0	0	0	90.3	2	-2,-5	-	-	3.864	MINOR
ENSMUSG00000022452	Smdt1	ENSMUST00000023086	ENSMUSP00000023086	TRANSLATION	protein_coding	-	CCDS27688.1	1	107	0	0	0.5	125.9	2	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000022452	Smdt1	ENSMUST00000230165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022357	Klhl38	ENSMUST00000022985	ENSMUSP00000022985	TRANSLATION	protein_coding	-	CCDS27492.1	1	581	0	1.42	5.1	258.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068206	Pick1	ENSMUST00000166155	ENSMUSP00000129468	TRANSLATION	protein_coding	-	CCDS27635.1	1	416	0	5.34	6.3	327.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068206	Pick1	ENSMUST00000113954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000168513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000171365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000171581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000163571	ENSMUSP00000128126	TRANSLATION	protein_coding	-	CCDS27635.1	5	416	0	5.34	6.3	327.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068206	Pick1	ENSMUST00000165609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000166417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068206	Pick1	ENSMUST00000018295	ENSMUSP00000018295	TRANSLATION	protein_coding	-	CCDS27635.1	1	416	0	5.34	6.3	327.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068206	Pick1	ENSMUST00000172162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068206	Pick1	ENSMUST00000169548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022342	Kcnv1	ENSMUST00000022967	ENSMUSP00000022967	TRANSLATION	protein_coding	-	CCDS27459.1	1	503	0	1.32	5.1	258.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022342	Kcnv1	ENSMUST00000228536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022468	Endou	ENSMUST00000023105	ENSMUSP00000023105	TRANSLATION	protein_coding	-	CCDS27783.1	1	454	0	4.76	0.5	363.9	0	-4,-7	-	-	8.412	MINOR
ENSMUSG00000022468	Endou	ENSMUST00000100249	ENSMUSP00000097820	TRANSLATION	protein_coding	-	CCDS49712.1	1	412	0	5.42	1.5	401.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022468	Endou	ENSMUST00000230430	ENSMUSP00000155246	TRANSLATION	nonsense_mediated_decay	-	-	-	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090129	Olfr287	ENSMUST00000145768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090129	Olfr287	ENSMUST00000170618	ENSMUSP00000129271	TRANSLATION	protein_coding	-	CCDS49720.1	2	322	0	0.28	3.9	169.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000090129	Olfr287	ENSMUST00000206224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090129	Olfr287	ENSMUST00000155603	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090129	Olfr287	ENSMUST00000132068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036061	Smug1	ENSMUST00000064067	ENSMUSP00000065835	TRANSLATION	protein_coding	-	CCDS27898.1	2	279	13	3	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036061	Smug1	ENSMUST00000229371	ENSMUSP00000155594	TRANSLATION	protein_coding	-	CCDS27898.1	-	279	13	3	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036061	Smug1	ENSMUST00000230529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036061	Smug1	ENSMUST00000229429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036061	Smug1	ENSMUST00000231198	ENSMUSP00000155293	TRANSLATION	protein_coding	stop	-	-	144	11	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036061	Smug1	ENSMUST00000229377	ENSMUSP00000155700	TRANSLATION	protein_coding	-	CCDS27898.1	-	279	13	3	1.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015377	Dennd6b	ENSMUST00000229935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015377	Dennd6b	ENSMUST00000230823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015377	Dennd6b	ENSMUST00000229416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015377	Dennd6b	ENSMUST00000230111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015377	Dennd6b	ENSMUST00000229755	ENSMUSP00000155612	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000015377	Dennd6b	ENSMUST00000078953	ENSMUSP00000077978	TRANSLATION	protein_coding	-	CCDS57000.1	1	585	0	0	3.9	26.8	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000190730	ENSMUSP00000139884	TRANSLATION	protein_coding	-	CCDS79388.1	1	155	0	0	0.5	161.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000190509	ENSMUSP00000140611	TRANSLATION	protein_coding	-	CCDS79387.1	5	195	0	0	0.5	214.4	0	-4,-6	-	-	1.002	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000191006	ENSMUSP00000141129	TRANSLATION	protein_coding	start	-	3	18	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000188562	ENSMUSP00000139947	TRANSLATION	protein_coding	-	-	3	43	0	0	0	58.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000189761	ENSMUSP00000139736	TRANSLATION	nonsense_mediated_decay	-	-	1	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000169604	ENSMUSP00000129244	TRANSLATION	protein_coding	-	CCDS27633.1	1	216	0	0	3.9	297.7	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000185944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000186559	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000190959	ENSMUSP00000140347	TRANSLATION	protein_coding	-	CCDS27633.1	5	216	0	0	3.9	297.7	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000186459	ENSMUSP00000139974	TRANSLATION	nonsense_mediated_decay	-	-	3	64	0	0	0	23.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000190400	ENSMUSP00000141080	TRANSLATION	protein_coding	start	-	3	58	0	0	0	71.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000187550	ENSMUSP00000140978	TRANSLATION	protein_coding	-	CCDS79388.1	1	155	0	0	0.5	161.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000033029	1700088E04Rik	ENSMUST00000186053	ENSMUSP00000140261	TRANSLATION	protein_coding	-	-	1	59	0	0	0	71.4	0	-4,-6	-	-	0	MINOR
ENSMUSG00000011960	Ccnt1	ENSMUST00000169674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011960	Ccnt1	ENSMUST00000130921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011960	Ccnt1	ENSMUST00000164565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011960	Ccnt1	ENSMUST00000168928	ENSMUSP00000130286	TRANSLATION	nonsense_mediated_decay	-	-	5	184	0	4.75	1.2	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000011960	Ccnt1	ENSMUST00000169707	ENSMUSP00000126874	TRANSLATION	protein_coding	-	CCDS27797.1	1	724	0	6.5	0.5	70	0	-4,-5	-	-	11.64	PRINCIPAL:1
ENSMUSG00000011960	Ccnt1	ENSMUST00000012104	ENSMUSP00000012104	TRANSLATION	protein_coding	-	CCDS27797.1	1	724	0	6.5	0.5	70	0	-4,-5	-	-	11.64	PRINCIPAL:1
ENSMUSG00000011960	Ccnt1	ENSMUST00000164294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011960	Ccnt1	ENSMUST00000170452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011960	Ccnt1	ENSMUST00000163180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050328	Hoxc12	ENSMUST00000055562	ENSMUSP00000051003	TRANSLATION	protein_coding	-	CCDS27891.1	1	280	0	1	5.1	64.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022337	Emc2	ENSMUST00000228864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022337	Emc2	ENSMUST00000227055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022337	Emc2	ENSMUST00000022962	ENSMUSP00000022962	TRANSLATION	protein_coding	-	CCDS27453.1	1	297	0	2.875	19.5	31.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000075408	Smim41	ENSMUST00000071328	ENSMUSP00000154686	TRANSLATION	protein_coding	-	-	5	144	0	0	0	0	1	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000075408	Smim41	ENSMUST00000191426	ENSMUSP00000153762	TRANSLATION	protein_coding	-	-	1	89	0	0	0	0	1	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000075394	Hoxc4	ENSMUST00000165375	ENSMUSP00000133561	TRANSLATION	protein_coding	-	-	1	151	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075394	Hoxc4	ENSMUST00000100164	ENSMUSP00000097740	TRANSLATION	protein_coding	-	CCDS27897.1	1	264	0	1	7.5	77.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000018169	Mfng	ENSMUST00000123518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018169	Mfng	ENSMUST00000128389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018169	Mfng	ENSMUST00000136795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018169	Mfng	ENSMUST00000018313	ENSMUSP00000018313	TRANSLATION	protein_coding	-	CCDS27622.1	1	321	10	6.75	3.9	369.4	0	1,-4	-	-	19	PRINCIPAL:1
ENSMUSG00000061360	Phf5a	ENSMUST00000160415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061360	Phf5a	ENSMUST00000023117	ENSMUSP00000023117	TRANSLATION	protein_coding	-	CCDS27674.1	1	110	12	2.58	19.5	167	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000061360	Phf5a	ENSMUST00000230134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022240	Ctnnd2	ENSMUST00000226797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022240	Ctnnd2	ENSMUST00000228282	ENSMUSP00000154219	TRANSLATION	protein_coding	stop	-	-	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022240	Ctnnd2	ENSMUST00000228827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022240	Ctnnd2	ENSMUST00000227029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022240	Ctnnd2	ENSMUST00000228753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022240	Ctnnd2	ENSMUST00000227857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022240	Ctnnd2	ENSMUST00000226119	ENSMUSP00000154410	TRANSLATION	protein_coding	-	-	-	1221	0	8.54	1.5	121.3	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022240	Ctnnd2	ENSMUST00000227065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022240	Ctnnd2	ENSMUST00000227004	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022240	Ctnnd2	ENSMUST00000081728	ENSMUSP00000080427	TRANSLATION	protein_coding	-	CCDS27405.1	1	1246	0	8.165	1.5	121.3	0	-4,-7	-	-	11.25	PRINCIPAL:2
ENSMUSG00000022240	Ctnnd2	ENSMUST00000226116	ENSMUSP00000154324	TRANSLATION	nonsense_mediated_decay	-	-	-	103	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022240	Ctnnd2	ENSMUST00000228695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000226944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000228710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000226904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000228814	ENSMUSP00000153826	TRANSLATION	nonsense_mediated_decay	-	-	-	119	0	1.06	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022241	Tars	ENSMUST00000226597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000228207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022241	Tars	ENSMUST00000022849	ENSMUSP00000022849	TRANSLATION	protein_coding	-	CCDS27385.1	1	722	17	15.72	7.5	303.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022570	Tsta3	ENSMUST00000230485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022570	Tsta3	ENSMUST00000229085	ENSMUSP00000155151	TRANSLATION	nonsense_mediated_decay	-	-	-	62	12	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000229289	ENSMUSP00000154964	TRANSLATION	protein_coding	-	-	-	292	36	7.896	0	127.6	0	-4,-7	-	-	8.736	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000229641	ENSMUSP00000155139	TRANSLATION	protein_coding	-	CCDS27555.1	-	321	40	9.16	9.5	195.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022570	Tsta3	ENSMUST00000229997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022570	Tsta3	ENSMUST00000230364	ENSMUSP00000155636	TRANSLATION	nonsense_mediated_decay	-	-	-	128	17	2.33	0	52.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000229668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022570	Tsta3	ENSMUST00000229951	ENSMUSP00000155711	TRANSLATION	protein_coding	-	-	-	351	35	8.43	0.5	133.5	0	-4,-7	-	-	9.486	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000230736	ENSMUSP00000155200	TRANSLATION	protein_coding	-	-	-	327	34	8.4	0	135.7	0	-4,-7	-	-	8.892	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000023231	ENSMUSP00000023231	TRANSLATION	protein_coding	-	CCDS27555.1	1	321	40	9.16	9.5	195.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022570	Tsta3	ENSMUST00000230610	ENSMUSP00000155677	TRANSLATION	nonsense_mediated_decay	-	-	-	128	17	2.33	0	52.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022570	Tsta3	ENSMUST00000230454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022570	Tsta3	ENSMUST00000229786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022570	Tsta3	ENSMUST00000230884	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058656	Samd12	ENSMUST00000078673	ENSMUSP00000077741	TRANSLATION	protein_coding	-	CCDS37072.1	1	161	0	1.6	7.8	64.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058656	Samd12	ENSMUST00000132362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058656	Samd12	ENSMUST00000154119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058656	Samd12	ENSMUST00000132059	ENSMUSP00000123446	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000230380	ENSMUSP00000155062	TRANSLATION	protein_coding	-	-	-	284	12	6.794	0	391.8	0	2,-2	-	-	7.122	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000230268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022453	Naga	ENSMUST00000230139	ENSMUSP00000155808	TRANSLATION	nonsense_mediated_decay	start	-	-	57	2	1	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000229294	ENSMUSP00000154927	TRANSLATION	protein_coding	stop	-	-	237	12	6.33	0	390.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000230269	ENSMUSP00000155445	TRANSLATION	protein_coding	stop	-	-	92	3	2	0	144	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000229733	ENSMUSP00000155238	TRANSLATION	protein_coding	-	-	-	99	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000229948	ENSMUSP00000155159	TRANSLATION	nonsense_mediated_decay	-	-	-	56	1	1.264	0	49.6	0	2,-2	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000023088	ENSMUSP00000023088	TRANSLATION	protein_coding	-	CCDS27686.1	1	415	12	9.594	1.5	479.8	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022453	Naga	ENSMUST00000229388	ENSMUSP00000155110	TRANSLATION	protein_coding	stop	-	-	218	12	5.594	0	324	0	2,-2	-	-	-1	MINOR
ENSMUSG00000022453	Naga	ENSMUST00000230664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022388	Ttll8	ENSMUST00000109371	ENSMUSP00000104996	TRANSLATION	protein_coding	-	CCDS27735.2	1	832	11	1.16	0.5	241.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022388	Ttll8	ENSMUST00000177254	ENSMUSP00000134858	TRANSLATION	nonsense_mediated_decay	start	-	1	189	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022388	Ttll8	ENSMUST00000137740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022388	Ttll8	ENSMUST00000177180	ENSMUSP00000135381	TRANSLATION	nonsense_mediated_decay	-	-	1	194	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000016757	Ttll12	ENSMUST00000016901	ENSMUSP00000016901	TRANSLATION	protein_coding	-	CCDS27706.1	1	639	18	2.12	0.5	253.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000016757	Ttll12	ENSMUST00000136066	ENSMUSP00000117161	TRANSLATION	nonsense_mediated_decay	-	-	1	210	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000016757	Ttll12	ENSMUST00000134334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053469	Tg	ENSMUST00000167344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053469	Tg	ENSMUST00000166403	ENSMUSP00000155392	TRANSLATION	protein_coding	-	-	1	367	0	3.44	0	178.8	0	-4,-7	-	-	0.798	MINOR
ENSMUSG00000053469	Tg	ENSMUST00000172153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053469	Tg	ENSMUST00000065916	ENSMUSP00000070239	TRANSLATION	protein_coding	-	CCDS37091.1	1	2766	0	6.04	1.5	913.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000053469	Tg	ENSMUST00000167512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053469	Tg	ENSMUST00000171045	ENSMUSP00000126454	TRANSLATION	protein_coding	-	-	5	1147	0	6.04	0	447.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000053469	Tg	ENSMUST00000163495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062683	Atp5g2	ENSMUST00000075630	ENSMUSP00000075057	TRANSLATION	protein_coding	-	CCDS27888.1	1	146	0	2	0.5	44	1	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000062683	Atp5g2	ENSMUST00000186952	ENSMUSP00000141008	TRANSLATION	protein_coding	stop	-	3	31	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000062683	Atp5g2	ENSMUST00000187160	ENSMUSP00000140323	TRANSLATION	protein_coding	start	-	2	107	0	1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000062683	Atp5g2	ENSMUST00000185641	ENSMUSP00000140414	TRANSLATION	protein_coding	-	CCDS27888.1	1	146	0	2	0.5	44	1	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000046834	Krt1	ENSMUST00000023790	ENSMUSP00000023790	TRANSLATION	protein_coding	-	CCDS37221.1	1	637	0	4.49	0.5	546.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000046834	Krt1	ENSMUST00000231047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046834	Krt1	ENSMUST00000230798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022307	Oxr1	ENSMUST00000170127	ENSMUSP00000126266	TRANSLATION	protein_coding	-	CCDS49599.1	1	832	0	6.46	0.5	170.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000022918	ENSMUSP00000022918	TRANSLATION	protein_coding	-	CCDS27448.1	1	778	0	6.46	0.5	170.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000022307	Oxr1	ENSMUST00000229836	ENSMUSP00000155473	TRANSLATION	protein_coding	stop	-	-	106	0	1.9	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000179393	ENSMUSP00000136923	TRANSLATION	protein_coding	-	CCDS49600.1	1	751	0	6.46	0.5	170.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000230778	ENSMUSP00000155161	TRANSLATION	protein_coding	-	-	-	574	0	1.78	0	35.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000229511	ENSMUSP00000155004	TRANSLATION	protein_coding	stop	-	-	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000230127	ENSMUSP00000155043	TRANSLATION	protein_coding	stop	-	-	109	0	1.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000090096	ENSMUSP00000087554	TRANSLATION	protein_coding	-	CCDS49600.1	5	751	0	6.46	0.5	170.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000229769	ENSMUSP00000155630	TRANSLATION	protein_coding	stop	-	-	399	0	1.78	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000110297	ENSMUSP00000105926	TRANSLATION	protein_coding	-	CCDS49598.1	1	866	0	6.46	0.5	170.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000230131	ENSMUSP00000155424	TRANSLATION	protein_coding	stop	-	-	198	0	3.68	0	78.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000230203	ENSMUSP00000155237	TRANSLATION	protein_coding	-	-	-	839	0	6.46	0.5	170.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000090095	ENSMUSP00000087553	TRANSLATION	protein_coding	-	CCDS49600.1	1	751	0	6.46	0.5	170.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022307	Oxr1	ENSMUST00000230126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022307	Oxr1	ENSMUST00000166917	ENSMUSP00000130456	TRANSLATION	protein_coding	-	CCDS49601.1	2	216	0	4.68	7.5	134.5	0	-4,-7	-	-	9.3	MINOR
ENSMUSG00000022307	Oxr1	ENSMUST00000231215	ENSMUSP00000155381	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000094559	Cyp2d34	ENSMUST00000229833	ENSMUSP00000155117	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	0.6	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000094559	Cyp2d34	ENSMUST00000109515	ENSMUSP00000105141	TRANSLATION	protein_coding	-	CCDS37161.1	1	504	30	9.18	1.5	466	1	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094559	Cyp2d34	ENSMUST00000230716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022997	Wnt1	ENSMUST00000023734	ENSMUSP00000023734	TRANSLATION	protein_coding	-	CCDS27807.1	1	370	0	1.88	7.5	400.6	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000022621	Rabl2	ENSMUST00000172053	ENSMUSP00000129253	TRANSLATION	nonsense_mediated_decay	-	-	5	103	15	2.33	0	81.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022621	Rabl2	ENSMUST00000165747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022621	Rabl2	ENSMUST00000171580	ENSMUSP00000128799	TRANSLATION	nonsense_mediated_decay	-	-	5	64	8	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022621	Rabl2	ENSMUST00000170126	ENSMUSP00000126182	TRANSLATION	nonsense_mediated_decay	-	-	3	74	11	1.58	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022621	Rabl2	ENSMUST00000023294	ENSMUSP00000023294	TRANSLATION	protein_coding	-	CCDS49704.1	1	223	22	5.01	1.5	214.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022621	Rabl2	ENSMUST00000171826	ENSMUSP00000129221	TRANSLATION	protein_coding	start/stop	-	1	57	7	1.43	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022621	Rabl2	ENSMUST00000169466	ENSMUSP00000129660	TRANSLATION	nonsense_mediated_decay	-	-	5	61	8	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022621	Rabl2	ENSMUST00000171142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022621	Rabl2	ENSMUST00000163376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022621	Rabl2	ENSMUST00000172074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022621	Rabl2	ENSMUST00000094056	ENSMUSP00000091598	TRANSLATION	protein_coding	-	-	1	138	10	2.15	0	0	0	-4,-5	-	-	0.282	MINOR
ENSMUSG00000022584	Ly6c2	ENSMUST00000188214	ENSMUSP00000140825	TRANSLATION	protein_coding	-	CCDS49638.1	1	131	0	0	0.5	55.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022584	Ly6c2	ENSMUST00000191451	ENSMUSP00000139556	TRANSLATION	protein_coding	-	CCDS49638.1	2	131	0	0	0.5	55.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022584	Ly6c2	ENSMUST00000187864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022584	Ly6c2	ENSMUST00000100542	ENSMUSP00000098110	TRANSLATION	protein_coding	-	CCDS49638.1	1	131	0	0	0.5	55.3	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000016942	Tmprss6	ENSMUST00000230473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016942	Tmprss6	ENSMUST00000230159	ENSMUSP00000155549	TRANSLATION	protein_coding	-	-	-	581	18	2.4	0	108.4	2	-4,-6	-	-	0	MINOR
ENSMUSG00000016942	Tmprss6	ENSMUST00000230226	ENSMUSP00000155401	TRANSLATION	protein_coding	-	-	-	799	28	8.114	1.5	356.4	2	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000016942	Tmprss6	ENSMUST00000230020	ENSMUSP00000155435	TRANSLATION	protein_coding	start/stop	-	-	98	4	1	0	25.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016942	Tmprss6	ENSMUST00000017086	ENSMUSP00000017086	TRANSLATION	protein_coding	-	CCDS37133.1	1	811	28	8.114	1.5	356.4	2	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000016942	Tmprss6	ENSMUST00000229124	ENSMUSP00000155414	TRANSLATION	protein_coding	stop	-	-	121	11	1.4	0	33.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000016942	Tmprss6	ENSMUST00000229516	ENSMUSP00000155355	TRANSLATION	protein_coding	-	-	-	594	18	2.55	0	108.4	2	-4,-6	-	-	0	MINOR
ENSMUSG00000089678	Agxt2	ENSMUST00000110540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000089678	Agxt2	ENSMUST00000022858	ENSMUSP00000022858	TRANSLATION	protein_coding	-	CCDS27378.1	2	541	12	10.494	0.5	311	0	-4,0	-	-	17.952	PRINCIPAL:3
ENSMUSG00000089678	Agxt2	ENSMUST00000110541	ENSMUSP00000106170	TRANSLATION	protein_coding	-	-	2	234	7	3.814	0	115.8	0	-4,0	-	-	2.664	MINOR
ENSMUSG00000089678	Agxt2	ENSMUST00000110542	ENSMUSP00000106171	TRANSLATION	protein_coding	-	CCDS79362.1	1	513	12	9.99	3.9	311.8	0	-4,0	-	-	17.992	ALTERNATIVE:2
ENSMUSG00000022634	Yaf2	ENSMUST00000133736	ENSMUSP00000155669	TRANSLATION	nonsense_mediated_decay	-	-	1	68	4	1	0	35.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022634	Yaf2	ENSMUST00000080299	ENSMUSP00000079179	TRANSLATION	protein_coding	-	CCDS27765.1	1	179	4	2	5.2	102.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042109	Csdc2	ENSMUST00000135663	ENSMUSP00000121080	TRANSLATION	protein_coding	stop	-	5	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042109	Csdc2	ENSMUST00000230633	ENSMUSP00000155106	TRANSLATION	protein_coding	stop	-	-	30	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042109	Csdc2	ENSMUST00000152678	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042109	Csdc2	ENSMUST00000140209	ENSMUSP00000154905	TRANSLATION	protein_coding	stop	-	5	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042109	Csdc2	ENSMUST00000038757	ENSMUSP00000044441	TRANSLATION	protein_coding	-	CCDS27677.1	1	154	0	3.25	5.1	50.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000078907	Fam186b	ENSMUST00000109100	ENSMUSP00000104728	TRANSLATION	protein_coding	-	CCDS37200.1	5	943	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000078907	Fam186b	ENSMUST00000230608	ENSMUSP00000155427	TRANSLATION	protein_coding	stop	-	-	77	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022324	Matn2	ENSMUST00000228570	ENSMUSP00000154572	TRANSLATION	protein_coding	-	-	-	810	23	8.64	0	510.1	0	4,-1	-	-	10.122	MINOR
ENSMUSG00000022324	Matn2	ENSMUST00000227119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022324	Matn2	ENSMUST00000226766	ENSMUSP00000154740	TRANSLATION	protein_coding	-	-	-	280	5	0.6	0	161.8	0	4,-1	-	-	0	MINOR
ENSMUSG00000022324	Matn2	ENSMUST00000227759	ENSMUSP00000154040	TRANSLATION	protein_coding	-	-	-	956	23	9.58	3.9	615.8	0	4,-1	-	-	19	ALTERNATIVE:2
ENSMUSG00000022324	Matn2	ENSMUST00000163455	ENSMUSP00000128202	TRANSLATION	protein_coding	-	-	5	957	23	9.58	2.9	612.3	0	4,-1	-	-	18.445	ALTERNATIVE:2
ENSMUSG00000022324	Matn2	ENSMUST00000022947	ENSMUSP00000022947	TRANSLATION	protein_coding	-	CCDS37056.1	1	937	23	9.58	3.9	615.8	0	4,-1	-	-	19	PRINCIPAL:2
ENSMUSG00000068391	Chrac1	ENSMUST00000137698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068391	Chrac1	ENSMUST00000134353	ENSMUSP00000120833	TRANSLATION	protein_coding	-	-	2	94	0	1.6	0	48.7	0	-4,-6	-	-	10.8	MINOR
ENSMUSG00000068391	Chrac1	ENSMUST00000089765	ENSMUSP00000087197	TRANSLATION	protein_coding	-	CCDS27516.1	1	129	0	2	2.7	47.5	0	-4,-6	-	-	11.85	PRINCIPAL:1
ENSMUSG00000022619	Mapk8ip2	ENSMUST00000137755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022619	Mapk8ip2	ENSMUST00000023291	ENSMUSP00000023291	TRANSLATION	protein_coding	-	CCDS27752.1	1	830	0	1.75	0.5	160.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022477	Aco2	ENSMUST00000157003	ENSMUSP00000154821	TRANSLATION	protein_coding	-	-	2	77	0	0.98	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000022477	Aco2	ENSMUST00000135198	ENSMUSP00000155234	TRANSLATION	protein_coding	-	-	2	58	0	1.48	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000022477	Aco2	ENSMUST00000144324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022477	Aco2	ENSMUST00000231075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022477	Aco2	ENSMUST00000231091	ENSMUSP00000154939	TRANSLATION	protein_coding	stop	-	-	62	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022477	Aco2	ENSMUST00000126352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022477	Aco2	ENSMUST00000023116	ENSMUSP00000023116	TRANSLATION	protein_coding	-	CCDS27675.1	1	780	23	18.23	17.5	161	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000022477	Aco2	ENSMUST00000155704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022477	Aco2	ENSMUST00000229068	ENSMUSP00000155818	TRANSLATION	protein_coding	stop	-	-	194	6	4.7	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000346	Dazap2	ENSMUST00000230661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000346	Dazap2	ENSMUST00000000356	ENSMUSP00000000356	TRANSLATION	protein_coding	-	CCDS27841.1	1	168	0	0	9.5	151.3	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000000346	Dazap2	ENSMUST00000229424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000346	Dazap2	ENSMUST00000230384	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022607	Ptk2	ENSMUST00000110036	ENSMUSP00000105663	TRANSLATION	protein_coding	-	CCDS37099.1	1	1052	4	21.71	5.1	541.5	0	-4,-5	-	-	17.906	PRINCIPAL:2
ENSMUSG00000022607	Ptk2	ENSMUST00000227395	ENSMUSP00000154445	TRANSLATION	protein_coding	stop	-	-	81	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000226466	ENSMUSP00000154075	TRANSLATION	protein_coding	stop	-	-	126	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000226791	ENSMUSP00000154578	TRANSLATION	protein_coding	stop	-	-	119	0	3.83	0	28.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000226742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022607	Ptk2	ENSMUST00000226848	ENSMUSP00000153989	TRANSLATION	protein_coding	stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000239146	ENSMUSP00000159174	TRANSLATION	protein_coding	-	-	-	1093	4	21.368	5.3	541.5	0	-4,-5	-	-	17.316	ALTERNATIVE:1
ENSMUSG00000022607	Ptk2	ENSMUST00000228628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022607	Ptk2	ENSMUST00000227569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022607	Ptk2	ENSMUST00000226988	ENSMUSP00000154242	TRANSLATION	protein_coding	-	-	-	1055	4	21.71	5.1	541.5	0	-4,-5	-	-	17.906	ALTERNATIVE:1
ENSMUSG00000022607	Ptk2	ENSMUST00000228180	ENSMUSP00000155470	TRANSLATION	protein_coding	-	-	-	198	0	5.33	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000227686	ENSMUSP00000153821	TRANSLATION	protein_coding	stop	-	-	114	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000226893	ENSMUSP00000154733	TRANSLATION	protein_coding	stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022607	Ptk2	ENSMUST00000226454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022607	Ptk2	ENSMUST00000228457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022607	Ptk2	ENSMUST00000227435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061731	Ext1	ENSMUST00000133362	ENSMUSP00000117921	TRANSLATION	nonsense_mediated_decay	-	-	5	44	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000061731	Ext1	ENSMUST00000077273	ENSMUSP00000076505	TRANSLATION	protein_coding	-	CCDS27466.1	1	746	3	2.66	8.8	563.3	0	-2,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000061731	Ext1	ENSMUST00000110244	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061731	Ext1	ENSMUST00000140798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022300	Dcaf13	ENSMUST00000228436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022300	Dcaf13	ENSMUST00000022909	ENSMUSP00000022909	TRANSLATION	protein_coding	-	CCDS37066.1	1	445	0	5.24	10.2	191.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022300	Dcaf13	ENSMUST00000227219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022300	Dcaf13	ENSMUST00000226224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047728	Ly6g2	ENSMUST00000185307	ENSMUSP00000140330	TRANSLATION	protein_coding	-	-	2	134	0	0	1.5	48.1	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000047728	Ly6g2	ENSMUST00000229521	ENSMUSP00000155184	TRANSLATION	protein_coding	-	-	-	134	0	0	1.5	48.1	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000047728	Ly6g2	ENSMUST00000055719	ENSMUSP00000053396	TRANSLATION	protein_coding	-	-	1	124	0	0	0	48.1	0	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000022339	Ebag9	ENSMUST00000022964	ENSMUSP00000022964	TRANSLATION	protein_coding	-	CCDS27457.1	1	213	0	0	15.3	0	0	-2,-1	-	-	4	PRINCIPAL:1
ENSMUSG00000022339	Ebag9	ENSMUST00000228648	ENSMUSP00000153877	TRANSLATION	protein_coding	stop	-	-	103	0	0	0	0	0	-2,-1	-	-	-1	MINOR
ENSMUSG00000022339	Ebag9	ENSMUST00000227691	ENSMUSP00000154361	TRANSLATION	protein_coding	-	CCDS27457.1	-	213	0	0	15.3	0	0	-2,-1	-	-	4	PRINCIPAL:1
ENSMUSG00000022339	Ebag9	ENSMUST00000226165	ENSMUSP00000153791	TRANSLATION	protein_coding	-	CCDS27457.1	-	213	0	0	15.3	0	0	-2,-1	-	-	4	PRINCIPAL:1
ENSMUSG00000063780	Olfr282	ENSMUST00000205491	ENSMUSP00000145796	TRANSLATION	protein_coding	stop	-	5	31	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063780	Olfr282	ENSMUST00000215320	ENSMUSP00000151156	TRANSLATION	protein_coding	-	CCDS27793.1	5	308	0	1.5	5.1	182.8	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000063780	Olfr282	ENSMUST00000075851	ENSMUSP00000075248	TRANSLATION	protein_coding	-	CCDS27793.1	-	308	0	1.5	5.1	182.8	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000063780	Olfr282	ENSMUST00000213608	ENSMUSP00000149792	TRANSLATION	protein_coding	-	CCDS27793.1	5	308	0	1.5	5.1	182.8	4	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000042406	Atf4	ENSMUST00000230434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042406	Atf4	ENSMUST00000229828	ENSMUSP00000155806	TRANSLATION	protein_coding	stop	-	-	116	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042406	Atf4	ENSMUST00000109605	ENSMUSP00000105234	TRANSLATION	protein_coding	-	CCDS37145.1	1	349	0	0.6	1.5	62.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038679	Trps1	ENSMUST00000183757	ENSMUSP00000139017	TRANSLATION	protein_coding	-	CCDS79370.1	1	1285	27	1	6.4	46.6	0	-4,-6	-	-	19.01	ALTERNATIVE:1
ENSMUSG00000038679	Trps1	ENSMUST00000183997	ENSMUSP00000139115	TRANSLATION	protein_coding	-	CCDS79371.1	1	1096	21	1.198	0.5	46.6	0	-4,-6	-	-	13.998	MINOR
ENSMUSG00000038679	Trps1	ENSMUST00000184458	ENSMUSP00000139063	TRANSLATION	protein_coding	-	-	1	994	23	1	0	46.6	0	-4,-2	-	-	14.346	MINOR
ENSMUSG00000038679	Trps1	ENSMUST00000077935	ENSMUSP00000077089	TRANSLATION	protein_coding	-	CCDS27460.1	1	1281	27	1	6.3	46.6	0	-4,-5	-	-	18.972	PRINCIPAL:3
ENSMUSG00000038679	Trps1	ENSMUST00000165201	ENSMUSP00000129779	TRANSLATION	protein_coding	-	CCDS27460.1	1	1281	27	1	6.3	46.6	0	-4,-5	-	-	18.972	PRINCIPAL:3
ENSMUSG00000038679	Trps1	ENSMUST00000184885	ENSMUSP00000138905	TRANSLATION	protein_coding	-	-	1	1035	21	1	0	46.6	0	-4,-5	-	-	13.008	MINOR
ENSMUSG00000038679	Trps1	ENSMUST00000183421	ENSMUSP00000138835	TRANSLATION	protein_coding	-	-	1	229	3	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000038679	Trps1	ENSMUST00000185183	ENSMUSP00000138967	TRANSLATION	protein_coding	stop	-	2	255	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048755	Mcat	ENSMUST00000230672	ENSMUSP00000155428	TRANSLATION	protein_coding	start/stop	-	-	129	1	2.2	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048755	Mcat	ENSMUST00000229724	ENSMUSP00000155738	TRANSLATION	protein_coding	stop	-	-	116	4	2.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048755	Mcat	ENSMUST00000229177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048755	Mcat	ENSMUST00000230094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048755	Mcat	ENSMUST00000061882	ENSMUSP00000051569	TRANSLATION	protein_coding	-	CCDS27704.1	1	381	7	6.16	1.5	79.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000048755	Mcat	ENSMUST00000230851	ENSMUSP00000155224	TRANSLATION	protein_coding	start	-	-	71	2	2.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042622	Maff	ENSMUST00000229130	ENSMUSP00000154850	TRANSLATION	protein_coding	-	CCDS27638.1	-	156	0	1.8	1.5	114.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042622	Maff	ENSMUST00000229285	ENSMUSP00000155516	TRANSLATION	protein_coding	stop	-	-	101	0	1	0	101.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042622	Maff	ENSMUST00000096350	ENSMUSP00000094076	TRANSLATION	protein_coding	-	CCDS27638.1	1	156	0	1.8	1.5	114.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042622	Maff	ENSMUST00000163691	ENSMUSP00000131628	TRANSLATION	protein_coding	-	CCDS27638.1	1	156	0	1.8	1.5	114.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022249	Ttc23l	ENSMUST00000167842	ENSMUSP00000155921	TRANSLATION	protein_coding	-	-	3	453	0	1.7	1	31.2	0	-4,-1	-	-	11.514	ALTERNATIVE:2
ENSMUSG00000022249	Ttc23l	ENSMUST00000166039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022249	Ttc23l	ENSMUST00000022857	ENSMUSP00000022857	TRANSLATION	protein_coding	-	CCDS49582.1	1	458	0	1.85	0.5	31.2	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000000530	Acvrl1	ENSMUST00000120754	ENSMUSP00000112490	TRANSLATION	protein_coding	-	CCDS37215.1	5	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000128868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000530	Acvrl1	ENSMUST00000130432	ENSMUSP00000122998	TRANSLATION	protein_coding	stop	-	5	26	0	0.1	0	0	0	-1,-1	-	-	-1	MINOR
ENSMUSG00000000530	Acvrl1	ENSMUST00000124151	ENSMUSP00000114829	TRANSLATION	protein_coding	stop	-	3	76	0	0.9	0	0	0	2,1	-	-	-1	MINOR
ENSMUSG00000000530	Acvrl1	ENSMUST00000144229	ENSMUSP00000115241	TRANSLATION	protein_coding	stop	-	5	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000530	Acvrl1	ENSMUST00000120028	ENSMUSP00000113297	TRANSLATION	protein_coding	-	CCDS37215.1	1	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000121718	ENSMUSP00000114027	TRANSLATION	protein_coding	-	CCDS37215.1	1	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000117984	ENSMUSP00000113505	TRANSLATION	protein_coding	-	CCDS37215.1	5	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000119063	ENSMUSP00000113536	TRANSLATION	protein_coding	-	CCDS37215.1	1	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000000542	ENSMUSP00000000542	TRANSLATION	protein_coding	-	CCDS37215.1	1	502	20	7.85	6.3	178.6	1	2,1	-	-	20	PRINCIPAL:1
ENSMUSG00000000530	Acvrl1	ENSMUST00000128525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003355	Fkbp11	ENSMUST00000229562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003355	Fkbp11	ENSMUST00000003445	ENSMUSP00000003445	TRANSLATION	protein_coding	-	CCDS27803.1	1	201	3	2.88	1.7	85.2	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000003355	Fkbp11	ENSMUST00000230743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022622	Acr	ENSMUST00000230538	ENSMUSP00000155444	TRANSLATION	protein_coding	start/stop	-	-	194	5	2.99	0	164.2	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022622	Acr	ENSMUST00000231216	ENSMUSP00000154827	TRANSLATION	nonsense_mediated_decay	start	-	-	38	0	0.24	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000022622	Acr	ENSMUST00000023295	ENSMUSP00000023295	TRANSLATION	protein_coding	-	CCDS27755.1	1	436	6	5.72	1.5	249.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022622	Acr	ENSMUST00000230978	ENSMUSP00000155369	TRANSLATION	protein_coding	start	-	-	224	2	3.45	0	157.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047921	Trappc9	ENSMUST00000230270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047921	Trappc9	ENSMUST00000228960	ENSMUSP00000155105	TRANSLATION	protein_coding	-	-	-	494	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000047921	Trappc9	ENSMUST00000170633	ENSMUSP00000131997	TRANSLATION	protein_coding	-	CCDS49630.1	1	940	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000047921	Trappc9	ENSMUST00000089770	ENSMUSP00000087202	TRANSLATION	protein_coding	-	CCDS37095.1	1	1139	0	0	6.3	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000047921	Trappc9	ENSMUST00000230025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047921	Trappc9	ENSMUST00000023276	ENSMUSP00000023276	TRANSLATION	protein_coding	-	CCDS37096.1	1	960	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000043460	Elfn2	ENSMUST00000229441	ENSMUSP00000155111	TRANSLATION	protein_coding	-	CCDS27621.1	-	823	0	0	5.1	49.6	1	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000043460	Elfn2	ENSMUST00000229550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043460	Elfn2	ENSMUST00000230478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043460	Elfn2	ENSMUST00000088592	ENSMUSP00000085960	TRANSLATION	protein_coding	-	CCDS27621.1	1	823	0	0	5.1	49.6	1	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000022309	Angpt1	ENSMUST00000227738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022309	Angpt1	ENSMUST00000022921	ENSMUSP00000022921	TRANSLATION	protein_coding	-	CCDS27450.1	1	498	9	5.46	14.8	234.9	0	1,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000037617	Spag1	ENSMUST00000047348	ENSMUSP00000047335	TRANSLATION	protein_coding	-	CCDS37061.1	1	901	0	7.34	0.5	140.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037617	Spag1	ENSMUST00000171205	ENSMUSP00000132233	TRANSLATION	protein_coding	-	CCDS37061.1	1	901	0	7.34	0.5	140.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037617	Spag1	ENSMUST00000227524	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037617	Spag1	ENSMUST00000227623	ENSMUSP00000153834	TRANSLATION	protein_coding	stop	-	-	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037617	Spag1	ENSMUST00000227715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037617	Spag1	ENSMUST00000227849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037617	Spag1	ENSMUST00000227436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037617	Spag1	ENSMUST00000227582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022595	Lypd2	ENSMUST00000188716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022595	Lypd2	ENSMUST00000023260	ENSMUSP00000023260	TRANSLATION	protein_coding	-	CCDS27529.1	1	127	0	1.6	1.5	27.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000068227	Il2rb	ENSMUST00000163494	ENSMUSP00000127006	TRANSLATION	protein_coding	-	CCDS27616.1	1	539	9	4.8	1.5	0	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000068227	Il2rb	ENSMUST00000089398	ENSMUSP00000086820	TRANSLATION	protein_coding	-	CCDS27616.1	1	539	9	4.8	1.5	0	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000114755	Galr3	ENSMUST00000058004	ENSMUSP00000060517	TRANSLATION	protein_coding	-	CCDS27631.1	1	370	0	1.12	1.5	155.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022431	Ribc2	ENSMUST00000229238	ENSMUSP00000154931	TRANSLATION	nonsense_mediated_decay	-	-	-	240	0	0	0.5	285.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022431	Ribc2	ENSMUST00000023067	ENSMUSP00000023067	TRANSLATION	protein_coding	-	CCDS49689.1	1	377	0	0	2.7	479.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068105	Tnfrsf13c	ENSMUST00000089161	ENSMUSP00000086564	TRANSLATION	protein_coding	-	CCDS27684.1	1	175	0	1.75	0.5	65.5	2	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000068105	Tnfrsf13c	ENSMUST00000109535	ENSMUSP00000105161	TRANSLATION	protein_coding	-	-	1	200	0	1.75	0	65.5	2	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000068105	Tnfrsf13c	ENSMUST00000231049	ENSMUSP00000154899	TRANSLATION	protein_coding	-	-	-	164	0	1.75	0.5	65.5	2	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000068105	Tnfrsf13c	ENSMUST00000229984	ENSMUSP00000155840	TRANSLATION	nonsense_mediated_decay	start	-	-	45	0	0.75	0	25.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000001288	Rarg	ENSMUST00000130204	ENSMUSP00000155670	TRANSLATION	protein_coding	stop	-	1	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001288	Rarg	ENSMUST00000063339	ENSMUSP00000067266	TRANSLATION	protein_coding	-	CCDS37226.1	1	447	31	7.566	2.9	191.4	0	-4,-6	-	-	18.206	MINOR
ENSMUSG00000001288	Rarg	ENSMUST00000230330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001288	Rarg	ENSMUST00000155563	ENSMUSP00000155448	TRANSLATION	protein_coding	stop	-	1	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001288	Rarg	ENSMUST00000124224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001288	Rarg	ENSMUST00000043172	ENSMUSP00000048838	TRANSLATION	protein_coding	-	CCDS27875.1	1	458	31	7.926	5.1	191.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000001288	Rarg	ENSMUST00000135466	ENSMUSP00000118615	TRANSLATION	protein_coding	stop	-	5	227	9	3.926	0	114.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072584	Gm7489	ENSMUST00000100666	ENSMUSP00000098231	TRANSLATION	protein_coding	-	-	1	171	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000059323	Tonsl	ENSMUST00000163990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059323	Tonsl	ENSMUST00000166974	ENSMUSP00000126362	TRANSLATION	protein_coding	stop	-	2	64	0	0.498	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059323	Tonsl	ENSMUST00000171478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059323	Tonsl	ENSMUST00000168432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059323	Tonsl	ENSMUST00000163161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059323	Tonsl	ENSMUST00000165163	ENSMUSP00000131229	TRANSLATION	protein_coding	start	-	3	86	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059323	Tonsl	ENSMUST00000168185	ENSMUSP00000129597	TRANSLATION	protein_coding	-	CCDS27580.2	1	1363	0	7.158	0.5	108.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059323	Tonsl	ENSMUST00000165190	ENSMUSP00000131368	TRANSLATION	nonsense_mediated_decay	-	-	1	417	0	2.293	0	19.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000115798	AC140267.1	ENSMUST00000226485	ENSMUSP00000154304	TRANSLATION	protein_coding	-	-	-	70	0	0	0	44.6	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000044933	Sstr3	ENSMUST00000230400	ENSMUSP00000155582	TRANSLATION	protein_coding	stop	-	-	121	0	0.8	0	49.4	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000044933	Sstr3	ENSMUST00000053239	ENSMUSP00000058040	TRANSLATION	protein_coding	-	CCDS27617.1	1	428	0	1.28	1.5	195.8	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042564	Fam227a	ENSMUST00000230366	ENSMUSP00000155521	TRANSLATION	nonsense_mediated_decay	-	-	-	115	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042564	Fam227a	ENSMUST00000229064	ENSMUSP00000155261	TRANSLATION	protein_coding	-	-	-	621	0	0	0.5	177.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000042564	Fam227a	ENSMUST00000109646	ENSMUSP00000105273	TRANSLATION	protein_coding	-	-	5	269	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000042564	Fam227a	ENSMUST00000046816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042564	Fam227a	ENSMUST00000231126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042564	Fam227a	ENSMUST00000230475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042564	Fam227a	ENSMUST00000230484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042564	Fam227a	ENSMUST00000231122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042564	Fam227a	ENSMUST00000191401	ENSMUSP00000140661	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042564	Fam227a	ENSMUST00000230429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042564	Fam227a	ENSMUST00000109648	ENSMUSP00000105275	TRANSLATION	protein_coding	-	-	5	625	0	0	0.5	177.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000042564	Fam227a	ENSMUST00000187519	ENSMUSP00000139524	TRANSLATION	protein_coding	-	CCDS79389.1	1	625	0	0	0.5	177.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000023484	Prph	ENSMUST00000230021	ENSMUSP00000155294	TRANSLATION	protein_coding	-	-	-	506	0	5.8	0.5	412.4	0	-4,0	-	-	11.322	MINOR
ENSMUSG00000023484	Prph	ENSMUST00000024249	ENSMUSP00000024249	TRANSLATION	protein_coding	-	CCDS49727.1	1	475	0	5.8	0.5	423.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000023484	Prph	ENSMUST00000229268	ENSMUSP00000155819	TRANSLATION	protein_coding	stop	-	-	48	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023484	Prph	ENSMUST00000047104	ENSMUSP00000049303	TRANSLATION	protein_coding	-	CCDS27813.1	1	507	0	5.8	0.5	412.4	0	-4,0	-	-	11.322	MINOR
ENSMUSG00000055827	Gsdmc3	ENSMUST00000185526	ENSMUSP00000140272	TRANSLATION	protein_coding	-	CCDS37088.1	5	480	0	5.0898	0.5	505.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055827	Gsdmc3	ENSMUST00000190682	ENSMUSP00000139472	TRANSLATION	protein_coding	-	CCDS37088.1	1	480	0	5.0898	0.5	505.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000055827	Gsdmc3	ENSMUST00000089894	ENSMUSP00000087339	TRANSLATION	protein_coding	-	CCDS37088.1	5	480	0	5.0898	0.5	505.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022552	Sharpin	ENSMUST00000154477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000159429	ENSMUSP00000124755	TRANSLATION	protein_coding	start	-	3	83	4	1.066	0	27.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022552	Sharpin	ENSMUST00000229536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022552	Sharpin	ENSMUST00000133993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000137106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000147001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000230314	ENSMUSP00000155231	TRANSLATION	nonsense_mediated_decay	-	-	-	157	0	1	0	62.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022552	Sharpin	ENSMUST00000123112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000144816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022552	Sharpin	ENSMUST00000230016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022552	Sharpin	ENSMUST00000023211	ENSMUSP00000023211	TRANSLATION	protein_coding	-	CCDS37121.1	1	380	4	4.946	0.5	167.2	0	-3,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000022552	Sharpin	ENSMUST00000160560	ENSMUSP00000125382	TRANSLATION	nonsense_mediated_decay	-	-	3	157	0	1	0	62.1	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022552	Sharpin	ENSMUST00000152151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036167	Pphln1	ENSMUST00000230385	ENSMUSP00000155236	TRANSLATION	protein_coding	stop	-	-	125	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036167	Pphln1	ENSMUST00000229071	ENSMUSP00000154876	TRANSLATION	protein_coding	-	CCDS37181.1	-	293	0	0	5.3	88.9	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000036167	Pphln1	ENSMUST00000229721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036167	Pphln1	ENSMUST00000068457	ENSMUSP00000068165	TRANSLATION	protein_coding	-	CCDS27768.1	1	312	0	0	5.1	88.9	0	-4,-6	-	-	7.906	PRINCIPAL:3
ENSMUSG00000036167	Pphln1	ENSMUST00000049122	ENSMUSP00000042762	TRANSLATION	protein_coding	-	CCDS27767.1	1	381	0	0	1.5	88.9	0	-4,-5	-	-	6.232	MINOR
ENSMUSG00000036167	Pphln1	ENSMUST00000109256	ENSMUSP00000104879	TRANSLATION	protein_coding	-	CCDS37181.1	1	293	0	0	5.3	88.9	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000036167	Pphln1	ENSMUST00000165935	ENSMUSP00000131121	TRANSLATION	protein_coding	-	CCDS37181.1	1	293	0	0	5.3	88.9	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000022575	Gsdmd	ENSMUST00000230881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022575	Gsdmd	ENSMUST00000231170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022575	Gsdmd	ENSMUST00000230514	ENSMUSP00000155766	TRANSLATION	protein_coding	stop	-	-	57	0	0.8	0	74.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022575	Gsdmd	ENSMUST00000229331	ENSMUSP00000155802	TRANSLATION	protein_coding	stop	-	-	263	0	2.86	0	273.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022575	Gsdmd	ENSMUST00000230571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022575	Gsdmd	ENSMUST00000023238	ENSMUSP00000023238	TRANSLATION	protein_coding	-	CCDS27551.1	1	487	0	6.47	1.5	572.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072501	Phf20l1	ENSMUST00000229160	ENSMUSP00000155487	TRANSLATION	protein_coding	-	CCDS49621.1	-	1013	8	4.675	1.5	273.2	0	-4,-6	-	-	17.184	PRINCIPAL:2
ENSMUSG00000072501	Phf20l1	ENSMUST00000230882	ENSMUSP00000155575	TRANSLATION	protein_coding	-	-	-	311	0	3.075	2.2	117.1	0	-4,-6	-	-	2.052	MINOR
ENSMUSG00000072501	Phf20l1	ENSMUST00000048188	ENSMUSP00000035682	TRANSLATION	protein_coding	-	-	5	1014	8	4.675	1.5	274.3	0	-4,-6	-	-	17.25	ALTERNATIVE:2
ENSMUSG00000072501	Phf20l1	ENSMUST00000229033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072501	Phf20l1	ENSMUST00000229590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072501	Phf20l1	ENSMUST00000230948	ENSMUSP00000155465	TRANSLATION	protein_coding	-	-	-	987	8	5.05	0.5	273.2	0	-4,-6	-	-	17.934	ALTERNATIVE:2
ENSMUSG00000072501	Phf20l1	ENSMUST00000231177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072501	Phf20l1	ENSMUST00000230250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072501	Phf20l1	ENSMUST00000230584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072501	Phf20l1	ENSMUST00000229486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072501	Phf20l1	ENSMUST00000229576	ENSMUSP00000155538	TRANSLATION	nonsense_mediated_decay	-	-	-	567	0	3.075	0	274.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072501	Phf20l1	ENSMUST00000230915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062760	Shisal1	ENSMUST00000189248	ENSMUSP00000141117	TRANSLATION	protein_coding	-	CCDS84184.1	1	219	0	0	0.5	0	2	-2,2	-	-	0	MINOR
ENSMUSG00000062760	Shisal1	ENSMUST00000186527	ENSMUSP00000140964	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	2,-4	-	-	-1	MINOR
ENSMUSG00000062760	Shisal1	ENSMUST00000189994	ENSMUSP00000140712	TRANSLATION	protein_coding	stop	-	2	157	0	0	0	0	2	3,-3	-	-	-1	MINOR
ENSMUSG00000062760	Shisal1	ENSMUST00000239449	ENSMUSP00000159372	TRANSLATION	protein_coding	-	CCDS49687.1	-	199	0	0	7.5	0	2	3,-4	-	-	3	PRINCIPAL:2
ENSMUSG00000062760	Shisal1	ENSMUST00000080751	ENSMUSP00000079575	TRANSLATION	protein_coding	-	-	1	198	0	0	7.5	0	2	3,-3	-	-	3	ALTERNATIVE:1
ENSMUSG00000052496	Pkdrej	ENSMUST00000064370	ENSMUSP00000086352	TRANSLATION	protein_coding	-	CCDS27723.1	-	2126	0	0	0.5	964.7	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000004187	Kifc2	ENSMUST00000229112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004187	Kifc2	ENSMUST00000230451	ENSMUSP00000155536	TRANSLATION	protein_coding	-	-	-	707	11	5.54	0.5	298.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000004187	Kifc2	ENSMUST00000230964	ENSMUSP00000155559	TRANSLATION	nonsense_mediated_decay	-	-	-	162	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000004187	Kifc2	ENSMUST00000230124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004187	Kifc2	ENSMUST00000004294	ENSMUSP00000004294	TRANSLATION	protein_coding	-	CCDS27583.1	1	792	11	5.54	1.5	298.9	0	-1,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000004187	Kifc2	ENSMUST00000229513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022382	Wnt7b	ENSMUST00000229495	ENSMUSP00000155817	TRANSLATION	protein_coding	-	CCDS49691.1	-	282	0	2.44	7.1	386.9	0	-4,-5	-	-	11.574	MINOR
ENSMUSG00000022382	Wnt7b	ENSMUST00000230299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022382	Wnt7b	ENSMUST00000167968	ENSMUSP00000130627	TRANSLATION	protein_coding	-	CCDS49691.1	1	282	0	2.44	7.1	386.9	0	-4,-5	-	-	11.574	MINOR
ENSMUSG00000022382	Wnt7b	ENSMUST00000023015	ENSMUSP00000023015	TRANSLATION	protein_coding	-	-	1	356	0	1.92	1.2	345.4	0	-4,-7	-	-	6.518	MINOR
ENSMUSG00000022382	Wnt7b	ENSMUST00000109424	ENSMUSP00000105051	TRANSLATION	protein_coding	-	CCDS37171.1	1	349	0	2.44	19.3	416.2	0	-1,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000022382	Wnt7b	ENSMUST00000229191	ENSMUSP00000155014	TRANSLATION	protein_coding	-	CCDS49692.1	-	353	0	2.44	15.1	416.2	0	-1,-4	-	-	15.08	ALTERNATIVE:1
ENSMUSG00000022336	Eif3e	ENSMUST00000226415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022336	Eif3e	ENSMUST00000022960	ENSMUSP00000022960	TRANSLATION	protein_coding	-	CCDS27452.1	1	445	0	12	15.8	227.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022336	Eif3e	ENSMUST00000228892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022336	Eif3e	ENSMUST00000226281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022351	Sqle	ENSMUST00000162142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022351	Sqle	ENSMUST00000022977	ENSMUSP00000022977	TRANSLATION	protein_coding	-	CCDS27497.1	1	572	30	3.42	7.5	369	3	-2,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022351	Sqle	ENSMUST00000100640	ENSMUSP00000098205	TRANSLATION	protein_coding	-	-	1	540	29	2.94	1.2	204.7	3	-2,-5	-	-	10.467	MINOR
ENSMUSG00000022351	Sqle	ENSMUST00000161953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022475	Hdac7	ENSMUST00000118294	ENSMUSP00000113380	TRANSLATION	protein_coding	-	CCDS57005.1	1	946	12	10.91	0.5	261.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000228466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022475	Hdac7	ENSMUST00000079838	ENSMUSP00000078766	TRANSLATION	protein_coding	-	CCDS57007.1	1	944	12	10.91	0.5	261.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000116409	ENSMUSP00000112110	TRANSLATION	protein_coding	-	CCDS57006.1	1	953	12	10.91	0.5	261.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000088402	ENSMUSP00000085744	TRANSLATION	protein_coding	-	CCDS37188.1	1	938	12	10.91	0.5	261.8	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022475	Hdac7	ENSMUST00000156045	ENSMUSP00000120576	TRANSLATION	nonsense_mediated_decay	-	-	1	636	4	3.26	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022475	Hdac7	ENSMUST00000119670	ENSMUSP00000112459	TRANSLATION	protein_coding	-	CCDS57001.1	1	892	12	10.91	0.5	261.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000116408	ENSMUSP00000112109	TRANSLATION	protein_coding	-	CCDS57004.1	1	916	12	10.91	0.5	261.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000135651	ENSMUSP00000119970	TRANSLATION	protein_coding	start/stop	-	3	213	7	3.89	0	39.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022475	Hdac7	ENSMUST00000120683	ENSMUSP00000112446	TRANSLATION	protein_coding	-	CCDS57003.1	1	868	9	9.41	0.5	140.2	0	-4,-2	-	-	7.002	MINOR
ENSMUSG00000022475	Hdac7	ENSMUST00000151334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022475	Hdac7	ENSMUST00000121514	ENSMUSP00000112641	TRANSLATION	protein_coding	-	CCDS57002.1	1	851	12	10.91	0.5	261.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000022475	Hdac7	ENSMUST00000134258	ENSMUSP00000118599	TRANSLATION	protein_coding	start/stop	-	3	257	4	3.06	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094814	Gm21973	ENSMUST00000157020	ENSMUSP00000120297	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	68	0	1	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000060794	Tssk5	ENSMUST00000227223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060794	Tssk5	ENSMUST00000071119	ENSMUSP00000071120	TRANSLATION	protein_coding	-	CCDS37122.1	1	372	19	4.7	1.5	190.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060794	Tssk5	ENSMUST00000230436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075605	Slurp2	ENSMUST00000057932	ENSMUSP00000051457	TRANSLATION	protein_coding	-	CCDS37103.1	1	97	0	2	1.5	44.2	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000033220	Rac2	ENSMUST00000230952	ENSMUSP00000155090	TRANSLATION	protein_coding	start	-	-	80	7	2	0	29.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033220	Rac2	ENSMUST00000043214	ENSMUSP00000036384	TRANSLATION	protein_coding	-	CCDS27619.1	1	192	24	5.5	21.5	181.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000033220	Rac2	ENSMUST00000229394	ENSMUSP00000154826	TRANSLATION	nonsense_mediated_decay	-	-	-	36	8	1.25	0	41.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075590	Nrbp2	ENSMUST00000226444	ENSMUSP00000154116	TRANSLATION	nonsense_mediated_decay	-	-	-	178	0	3.41	0	28.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075590	Nrbp2	ENSMUST00000019516	ENSMUSP00000019516	TRANSLATION	protein_coding	-	CCDS27561.1	1	258	0	0.96	2.5	0	0	-4,-6	-	-	0.517	MINOR
ENSMUSG00000075590	Nrbp2	ENSMUST00000226356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075590	Nrbp2	ENSMUST00000227646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075590	Nrbp2	ENSMUST00000228431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075590	Nrbp2	ENSMUST00000228366	ENSMUSP00000154287	TRANSLATION	protein_coding	-	-	-	499	0	5.736	3.9	72.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075590	Nrbp2	ENSMUST00000227183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075590	Nrbp2	ENSMUST00000227605	ENSMUSP00000154501	TRANSLATION	nonsense_mediated_decay	-	-	-	137	0	1.68	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075590	Nrbp2	ENSMUST00000228022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075590	Nrbp2	ENSMUST00000228419	ENSMUSP00000154620	TRANSLATION	nonsense_mediated_decay	start	-	-	14	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058914	C1qtnf3	ENSMUST00000110523	ENSMUSP00000106152	TRANSLATION	protein_coding	-	CCDS56977.1	5	319	0	3.2	6.3	157.7	0	4,-1	-	-	14	ALTERNATIVE:1
ENSMUSG00000058914	C1qtnf3	ENSMUST00000022853	ENSMUSP00000022853	TRANSLATION	protein_coding	-	CCDS27380.1	1	246	0	3.2	6.3	157.7	0	4,-1	-	-	14	PRINCIPAL:3
ENSMUSG00000035757	Selenoo	ENSMUST00000082439	ENSMUSP00000081020	TRANSLATION	protein_coding	-	CCDS27738.1	1	667	0	0	1.5	0	0	-1,3	-	-	0	PRINCIPAL:1
ENSMUSG00000035757	Selenoo	ENSMUST00000130700	ENSMUSP00000138382	TRANSLATION	nonsense_mediated_decay	-	-	1	297	0	0	0	0	0	-1,3	-	-	-1	MINOR
ENSMUSG00000022557	Bop1	ENSMUST00000229633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022557	Bop1	ENSMUST00000229132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022557	Bop1	ENSMUST00000229897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022557	Bop1	ENSMUST00000023217	ENSMUSP00000023217	TRANSLATION	protein_coding	-	CCDS27570.1	1	732	0	10.77	1.5	476.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000032783	Troap	ENSMUST00000230868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032783	Troap	ENSMUST00000230054	ENSMUSP00000155404	TRANSLATION	protein_coding	-	CCDS57008.1	-	668	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000032783	Troap	ENSMUST00000039665	ENSMUSP00000035389	TRANSLATION	protein_coding	-	CCDS57008.1	1	668	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000032783	Troap	ENSMUST00000229224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032783	Troap	ENSMUST00000229740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032783	Troap	ENSMUST00000230311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071716	Apol7e	ENSMUST00000229450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071716	Apol7e	ENSMUST00000096358	ENSMUSP00000094085	TRANSLATION	protein_coding	-	CCDS49663.1	1	369	0	0	0.5	394.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000009739	Pou6f1	ENSMUST00000176300	ENSMUSP00000134880	TRANSLATION	nonsense_mediated_decay	-	-	2	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009739	Pou6f1	ENSMUST00000177335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009739	Pou6f1	ENSMUST00000058274	ENSMUSP00000049955	TRANSLATION	protein_coding	-	-	2	219	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000009739	Pou6f1	ENSMUST00000073837	ENSMUSP00000073504	TRANSLATION	protein_coding	-	CCDS79411.1	1	576	0	2	0.5	170.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000009739	Pou6f1	ENSMUST00000230790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009739	Pou6f1	ENSMUST00000177505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009739	Pou6f1	ENSMUST00000176271	ENSMUSP00000145707	TRANSLATION	protein_coding	-	-	1	301	0	2	2.7	170.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000009739	Pou6f1	ENSMUST00000176140	ENSMUSP00000135670	TRANSLATION	nonsense_mediated_decay	start	-	5	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009739	Pou6f1	ENSMUST00000177247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009739	Pou6f1	ENSMUST00000177202	ENSMUSP00000135415	TRANSLATION	nonsense_mediated_decay	-	-	2	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009739	Pou6f1	ENSMUST00000205510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022141	Nipbl	ENSMUST00000052965	ENSMUSP00000059385	TRANSLATION	protein_coding	-	CCDS37035.1	1	2798	0	10.74	0.5	226	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055745	Rtl6	ENSMUST00000069476	ENSMUSP00000069947	TRANSLATION	protein_coding	-	CCDS37168.1	-	243	0	0	5.1	76.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000120746	ENSMUSP00000112898	TRANSLATION	protein_coding	-	CCDS27435.1	1	193	22	4.08	21.5	96.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000150453	ENSMUSP00000119726	TRANSLATION	protein_coding	stop	-	3	88	6	1	0	30.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051359	Ncald	ENSMUST00000137944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051359	Ncald	ENSMUST00000090150	ENSMUSP00000087611	TRANSLATION	protein_coding	-	CCDS27435.1	1	193	22	4.08	21.5	96.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000119730	ENSMUSP00000113858	TRANSLATION	protein_coding	-	CCDS27435.1	1	193	22	4.08	21.5	96.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000132423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051359	Ncald	ENSMUST00000168992	ENSMUSP00000130126	TRANSLATION	protein_coding	-	CCDS27435.1	5	193	22	4.08	21.5	96.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000153775	ENSMUSP00000114576	TRANSLATION	protein_coding	stop	-	5	187	22	3.75	0	96.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051359	Ncald	ENSMUST00000226924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051359	Ncald	ENSMUST00000116445	ENSMUSP00000112146	TRANSLATION	protein_coding	-	CCDS27435.1	3	193	22	4.08	21.5	96.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000051359	Ncald	ENSMUST00000123317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051359	Ncald	ENSMUST00000148652	ENSMUSP00000121460	TRANSLATION	protein_coding	stop	-	3	161	17	3	0	79.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063236	1110038F14Rik	ENSMUST00000071792	ENSMUSP00000071698	TRANSLATION	protein_coding	-	CCDS84175.1	1	222	0	0	1.5	131.7	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000063236	1110038F14Rik	ENSMUST00000230274	ENSMUSP00000154907	TRANSLATION	protein_coding	-	-	-	160	0	0	1.5	131.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000063236	1110038F14Rik	ENSMUST00000231058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063236	1110038F14Rik	ENSMUST00000229229	ENSMUSP00000155387	TRANSLATION	protein_coding	-	-	-	159	0	0	1.5	124.6	0	-4,-5	-	-	5.574	ALTERNATIVE:2
ENSMUSG00000022571	Pycrl	ENSMUST00000053918	ENSMUSP00000049605	TRANSLATION	protein_coding	-	CCDS37109.1	1	274	20	4.76	2.7	176.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037525	Bcdin3d	ENSMUST00000229827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037525	Bcdin3d	ENSMUST00000040313	ENSMUSP00000041809	TRANSLATION	protein_coding	-	CCDS37202.1	1	285	16	0.46	1.5	74.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039676	Capsl	ENSMUST00000226688	ENSMUSP00000153958	TRANSLATION	protein_coding	-	-	-	138	13	2.6	0.5	35.9	0	-4,-6	-	-	7.536	MINOR
ENSMUSG00000039676	Capsl	ENSMUST00000042360	ENSMUSP00000035663	TRANSLATION	protein_coding	-	CCDS37040.1	1	208	21	3.6	17.5	75.1	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000094296	Gm21798	ENSMUST00000180105	ENSMUSP00000136962	TRANSLATION	protein_coding	stop	-	5	87	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000041736	Tspo	ENSMUST00000208463	ENSMUSP00000146965	TRANSLATION	protein_coding	stop	-	3	102	0	2	0	92.2	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000041736	Tspo	ENSMUST00000047419	ENSMUSP00000037039	TRANSLATION	protein_coding	-	CCDS27705.1	1	169	0	3	6.3	154.1	5	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000049653	Spatc1	ENSMUST00000230221	ENSMUSP00000155378	TRANSLATION	nonsense_mediated_decay	-	-	-	327	0	0	0	290.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049653	Spatc1	ENSMUST00000074173	ENSMUSP00000073805	TRANSLATION	protein_coding	-	CCDS27564.1	1	480	0	0	0.5	421.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055762	Eef1d	ENSMUST00000055220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055762	Eef1d	ENSMUST00000137426	ENSMUSP00000114753	TRANSLATION	protein_coding	start	-	5	552	2	3.58	0	174.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000089681	ENSMUSP00000087110	TRANSLATION	protein_coding	-	CCDS27553.1	1	660	2	3.58	0.5	174.5	0	-4,-6	-	-	14	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000109972	ENSMUSP00000105599	TRANSLATION	protein_coding	-	CCDS70638.1	1	257	2	3.58	3.9	174.5	0	-4,-5	-	-	15.094	ALTERNATIVE:2
ENSMUSG00000055762	Eef1d	ENSMUST00000154584	ENSMUSP00000116360	TRANSLATION	protein_coding	-	CCDS27554.1	1	281	2	3.58	6.3	174.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000055762	Eef1d	ENSMUST00000141475	ENSMUSP00000123388	TRANSLATION	protein_coding	stop	-	2	228	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000151066	ENSMUSP00000118889	TRANSLATION	protein_coding	-	-	5	190	2	3.58	0	174.5	0	-4,-5	-	-	14	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000116440	ENSMUSP00000112141	TRANSLATION	protein_coding	-	CCDS70638.1	3	257	2	3.58	3.9	174.5	0	-4,-5	-	-	15.094	ALTERNATIVE:2
ENSMUSG00000055762	Eef1d	ENSMUST00000145764	ENSMUSP00000117782	TRANSLATION	protein_coding	stop	-	3	101	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000109975	ENSMUSP00000105602	TRANSLATION	protein_coding	-	CCDS27553.1	5	660	2	3.58	0.5	174.5	0	-4,-6	-	-	14	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000127550	ENSMUSP00000120735	TRANSLATION	protein_coding	stop	-	1	182	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000134222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055762	Eef1d	ENSMUST00000144614	ENSMUSP00000123005	TRANSLATION	protein_coding	stop	-	5	193	0	1	0	49.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000141268	ENSMUSP00000115553	TRANSLATION	protein_coding	stop	-	3	210	0	1	0	49.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000089680	ENSMUSP00000087109	TRANSLATION	protein_coding	-	CCDS70639.1	1	276	2	3.58	0.5	174.5	0	-4,-5	-	-	14	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000129800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055762	Eef1d	ENSMUST00000123712	ENSMUSP00000122155	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055762	Eef1d	ENSMUST00000023235	ENSMUSP00000023235	TRANSLATION	protein_coding	stop	-	3	245	1	2.33	0	115.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063661	Krt73	ENSMUST00000063292	ENSMUSP00000065349	TRANSLATION	protein_coding	-	CCDS27864.1	1	539	0	4.68	5.1	420.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000022404	Slc25a17	ENSMUST00000229564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022404	Slc25a17	ENSMUST00000231078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022404	Slc25a17	ENSMUST00000023040	ENSMUSP00000023040	TRANSLATION	protein_coding	-	CCDS27666.1	1	307	0	3.99	10.8	187.1	5	-3,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022404	Slc25a17	ENSMUST00000230309	ENSMUSP00000155849	TRANSLATION	nonsense_mediated_decay	start	-	-	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022404	Slc25a17	ENSMUST00000230983	ENSMUSP00000154824	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022404	Slc25a17	ENSMUST00000231140	ENSMUSP00000155823	TRANSLATION	nonsense_mediated_decay	-	-	-	186	0	2.655	0	89.4	3	-3,-6	-	-	-1	MINOR
ENSMUSG00000022404	Slc25a17	ENSMUST00000229617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116461	Gm44502	ENSMUST00000052315	ENSMUSP00000154958	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	180	10	3	0	53	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022303	Dcstamp	ENSMUST00000226831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022303	Dcstamp	ENSMUST00000022913	ENSMUSP00000022913	TRANSLATION	protein_coding	-	CCDS27444.1	1	470	0	0	1.5	186.1	7	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022303	Dcstamp	ENSMUST00000227368	ENSMUSP00000154397	TRANSLATION	protein_coding	-	-	-	414	0	0	0.5	117.4	7	-1,-5	-	-	1.878	MINOR
ENSMUSG00000022303	Dcstamp	ENSMUST00000227792	ENSMUSP00000153957	TRANSLATION	protein_coding	-	-	-	392	0	0	0.5	117.4	7	-1,-5	-	-	1.878	MINOR
ENSMUSG00000022303	Dcstamp	ENSMUST00000228556	ENSMUSP00000154362	TRANSLATION	protein_coding	-	-	-	367	0	0	2.7	120.2	7	-1,-5	-	-	2.046	MINOR
ENSMUSG00000022303	Dcstamp	ENSMUST00000228701	ENSMUSP00000154564	TRANSLATION	protein_coding	stop	-	-	19	0	0	0	0	0	-1,-7	-	-	-1	MINOR
ENSMUSG00000022442	Ttll1	ENSMUST00000154401	ENSMUSP00000117790	TRANSLATION	protein_coding	stop	-	3	89	1	0.5	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022442	Ttll1	ENSMUST00000109480	ENSMUSP00000105106	TRANSLATION	protein_coding	-	CCDS27702.1	5	423	20	3.255	12.8	378.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022442	Ttll1	ENSMUST00000016897	ENSMUSP00000016897	TRANSLATION	protein_coding	-	CCDS27702.1	1	423	20	3.255	12.8	378.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022442	Ttll1	ENSMUST00000109479	ENSMUSP00000105105	TRANSLATION	protein_coding	-	-	1	297	15	2.53	0	276	0	-4,-5	-	-	7.212	MINOR
ENSMUSG00000033728	Lrrc14	ENSMUST00000138132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033728	Lrrc14	ENSMUST00000142610	ENSMUSP00000117780	TRANSLATION	nonsense_mediated_decay	-	-	1	111	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000033728	Lrrc14	ENSMUST00000154531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033728	Lrrc14	ENSMUST00000155225	ENSMUSP00000122845	TRANSLATION	protein_coding	stop	-	3	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033728	Lrrc14	ENSMUST00000142506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033728	Lrrc14	ENSMUST00000136840	ENSMUSP00000119670	TRANSLATION	protein_coding	stop	-	3	166	0	0	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000033728	Lrrc14	ENSMUST00000137649	ENSMUSP00000121982	TRANSLATION	protein_coding	-	CCDS27589.1	1	493	0	0	7.5	13.1	0	-2,0	-	-	9	PRINCIPAL:1
ENSMUSG00000033728	Lrrc14	ENSMUST00000155735	ENSMUSP00000115446	TRANSLATION	protein_coding	-	CCDS27589.1	5	493	0	0	7.5	13.1	0	-2,0	-	-	9	PRINCIPAL:1
ENSMUSG00000033728	Lrrc14	ENSMUST00000127208	ENSMUSP00000114921	TRANSLATION	protein_coding	-	CCDS27589.1	1	493	0	0	7.5	13.1	0	-2,0	-	-	9	PRINCIPAL:1
ENSMUSG00000033728	Lrrc14	ENSMUST00000036423	ENSMUSP00000049466	TRANSLATION	protein_coding	-	CCDS27589.1	1	493	0	0	7.5	13.1	0	-2,0	-	-	9	PRINCIPAL:1
ENSMUSG00000064210	Ano6	ENSMUST00000227791	ENSMUSP00000153954	TRANSLATION	protein_coding	-	-	-	932	0	2.49	1.5	775.7	7	-4,-5	-	-	12.244	MINOR
ENSMUSG00000064210	Ano6	ENSMUST00000226761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064210	Ano6	ENSMUST00000226793	ENSMUSP00000154532	TRANSLATION	protein_coding	stop	-	-	193	0	0	0	135.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064210	Ano6	ENSMUST00000226682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064210	Ano6	ENSMUST00000226936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064210	Ano6	ENSMUST00000226932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064210	Ano6	ENSMUST00000227151	ENSMUSP00000153853	TRANSLATION	nonsense_mediated_decay	-	-	-	466	0	0.58	0	383.8	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000064210	Ano6	ENSMUST00000071874	ENSMUSP00000071770	TRANSLATION	protein_coding	-	CCDS37184.1	1	911	0	2.49	5.1	775.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022596	Slurp1	ENSMUST00000190433	ENSMUSP00000141013	TRANSLATION	protein_coding	-	CCDS27528.1	1	110	0	2.33	1.5	26	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022596	Slurp1	ENSMUST00000023261	ENSMUSP00000023261	TRANSLATION	protein_coding	-	-	5	93	0	0	0	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000055041	Commd5	ENSMUST00000230815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055041	Commd5	ENSMUST00000068407	ENSMUSP00000069159	TRANSLATION	protein_coding	-	CCDS27594.1	1	224	0	0	6.3	58.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000055041	Commd5	ENSMUST00000109793	ENSMUSP00000105416	TRANSLATION	protein_coding	-	CCDS27594.1	5	224	0	0	6.3	58.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000022582	Ly6g	ENSMUST00000023246	ENSMUSP00000023246	TRANSLATION	protein_coding	start	-	5	111	0	0	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022582	Ly6g	ENSMUST00000190262	ENSMUSP00000140173	TRANSLATION	protein_coding	-	CCDS79377.1	5	134	0	0	0.5	61.6	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022370	Mrpl13	ENSMUST00000165356	ENSMUSP00000125887	TRANSLATION	protein_coding	start	-	5	98	0	2.91	0	69.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022370	Mrpl13	ENSMUST00000170135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022370	Mrpl13	ENSMUST00000164542	ENSMUSP00000127456	TRANSLATION	nonsense_mediated_decay	-	-	1	58	0	1.33	0	27.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022370	Mrpl13	ENSMUST00000107207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022370	Mrpl13	ENSMUST00000172387	ENSMUSP00000130722	TRANSLATION	protein_coding	-	CCDS27477.1	1	178	0	5.32	10.8	155.7	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000051786	Tubgcp6	ENSMUST00000163290	ENSMUSP00000131359	TRANSLATION	nonsense_mediated_decay	start	-	5	293	0	1.3	0	120	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051786	Tubgcp6	ENSMUST00000169069	ENSMUSP00000132786	TRANSLATION	nonsense_mediated_decay	start	-	5	139	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051786	Tubgcp6	ENSMUST00000166994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051786	Tubgcp6	ENSMUST00000041656	ENSMUSP00000040132	TRANSLATION	protein_coding	-	-	5	1761	0	3.094	0	308.5	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000051786	Tubgcp6	ENSMUST00000231098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051786	Tubgcp6	ENSMUST00000169208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051786	Tubgcp6	ENSMUST00000168256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051786	Tubgcp6	ENSMUST00000166480	ENSMUSP00000132108	TRANSLATION	nonsense_mediated_decay	start	-	5	128	0	0.2	0	54.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000051786	Tubgcp6	ENSMUST00000170877	ENSMUSP00000129291	TRANSLATION	nonsense_mediated_decay	start	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051786	Tubgcp6	ENSMUST00000109353	ENSMUSP00000104977	TRANSLATION	protein_coding	-	CCDS49697.1	5	1769	0	3.094	0.5	308.4	0	-4,-6	-	-	11.994	PRINCIPAL:2
ENSMUSG00000051786	Tubgcp6	ENSMUST00000164717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022280	Rnf19a	ENSMUST00000228358	ENSMUSP00000154617	TRANSLATION	protein_coding	-	-	-	558	23	1.46	0.5	83.6	2	-4,-5	-	-	18	MINOR
ENSMUSG00000022280	Rnf19a	ENSMUST00000227735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022280	Rnf19a	ENSMUST00000022890	ENSMUSP00000022890	TRANSLATION	protein_coding	-	CCDS27427.1	1	840	23	1.46	7.5	83.6	2	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022515	Anks3	ENSMUST00000229017	ENSMUSP00000155720	TRANSLATION	protein_coding	start/stop	-	-	246	0	3.016	0	87.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022515	Anks3	ENSMUST00000231036	ENSMUSP00000155247	TRANSLATION	nonsense_mediated_decay	start	-	-	266	0	2	0	47.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022515	Anks3	ENSMUST00000230493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000230771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022515	Anks3	ENSMUST00000229077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000230721	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022515	Anks3	ENSMUST00000229477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000023157	ENSMUSP00000023157	TRANSLATION	protein_coding	-	CCDS27928.1	1	655	0	6.416	1.5	187	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022515	Anks3	ENSMUST00000229272	ENSMUSP00000155421	TRANSLATION	protein_coding	start	-	-	140	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022515	Anks3	ENSMUST00000230083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000229898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000230466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022515	Anks3	ENSMUST00000229765	ENSMUSP00000155302	TRANSLATION	protein_coding	-	-	-	469	0	5.416	0	169.4	0	-4,-5	-	-	8.946	MINOR
ENSMUSG00000014232	Cluap1	ENSMUST00000124849	ENSMUSP00000119490	TRANSLATION	protein_coding	stop	-	1	206	0	0	0	285.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000014232	Cluap1	ENSMUST00000040881	ENSMUSP00000043397	TRANSLATION	protein_coding	-	CCDS27912.1	1	413	0	0	8.8	392.8	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000014232	Cluap1	ENSMUST00000137745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014232	Cluap1	ENSMUST00000139294	ENSMUSP00000121029	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000014232	Cluap1	ENSMUST00000145150	ENSMUSP00000116855	TRANSLATION	protein_coding	stop	-	5	187	0	0	0	262.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040820	Hlcs	ENSMUST00000227141	ENSMUSP00000153773	TRANSLATION	protein_coding	-	-	-	869	24	2.38	1	136.7	0	-2,2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040820	Hlcs	ENSMUST00000226776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040820	Hlcs	ENSMUST00000227618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040820	Hlcs	ENSMUST00000227447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040820	Hlcs	ENSMUST00000226249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040820	Hlcs	ENSMUST00000163193	ENSMUSP00000130981	TRANSLATION	protein_coding	-	CCDS28346.1	1	722	24	2.38	1.5	136.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000040820	Hlcs	ENSMUST00000228910	ENSMUSP00000154157	TRANSLATION	protein_coding	-	-	-	327	24	2.38	0	136.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000040820	Hlcs	ENSMUST00000227698	ENSMUSP00000154056	TRANSLATION	protein_coding	stop	-	-	107	17	1.78	0	79.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040820	Hlcs	ENSMUST00000099512	ENSMUSP00000097112	TRANSLATION	protein_coding	-	CCDS28346.1	1	722	24	2.38	1.5	136.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000075033	Nxpe3	ENSMUST00000099705	ENSMUSP00000097296	TRANSLATION	protein_coding	-	CCDS49870.1	1	559	0	0	7.5	206.3	0	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000023088	Abcc1	ENSMUST00000134776	ENSMUSP00000120933	TRANSLATION	protein_coding	stop	-	5	199	0	1.25	0	0	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000154748	ENSMUSP00000115763	TRANSLATION	protein_coding	stop	-	3	194	0	0	0	0	9	-4,-6	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000230780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023088	Abcc1	ENSMUST00000130671	ENSMUSP00000116714	TRANSLATION	nonsense_mediated_decay	-	-	5	643	0	9	0	146.4	18	-4,-7	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000156089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023088	Abcc1	ENSMUST00000147759	ENSMUSP00000115627	TRANSLATION	nonsense_mediated_decay	-	-	5	643	0	9	0	146.4	18	-4,-7	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000134960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023088	Abcc1	ENSMUST00000133454	ENSMUSP00000122656	TRANSLATION	nonsense_mediated_decay	-	-	5	643	0	9	0	146.4	18	-4,-7	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000144676	ENSMUSP00000116726	TRANSLATION	protein_coding	stop	-	2	103	0	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000023088	Abcc1	ENSMUST00000100167	ENSMUSP00000097743	TRANSLATION	protein_coding	-	CCDS37264.1	1	1528	23	25.075	1.5	495.8	24	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023088	Abcc1	ENSMUST00000144074	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023088	Abcc1	ENSMUST00000146032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047531	Rtp2	ENSMUST00000061030	ENSMUSP00000062178	TRANSLATION	protein_coding	-	CCDS28081.1	1	223	0	0	2.7	81.7	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047531	Rtp2	ENSMUST00000231038	ENSMUSP00000155556	TRANSLATION	protein_coding	stop	-	-	237	0	0	0	81.7	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000062713	Sim2	ENSMUST00000231295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062713	Sim2	ENSMUST00000231688	ENSMUSP00000156302	TRANSLATION	nonsense_mediated_decay	-	-	-	406	0	6.65	0	170.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062713	Sim2	ENSMUST00000072182	ENSMUSP00000072043	TRANSLATION	protein_coding	-	CCDS37406.1	1	657	0	6.65	1.5	422.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022890	Atp5j	ENSMUST00000146103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022890	Atp5j	ENSMUST00000114191	ENSMUSP00000109829	TRANSLATION	protein_coding	-	CCDS28283.1	5	108	0	2.33	8.8	147.5	0	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000022890	Atp5j	ENSMUST00000148787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022890	Atp5j	ENSMUST00000138279	ENSMUSP00000122527	TRANSLATION	protein_coding	stop	-	3	91	0	2	0	136.1	0	-3,0	-	-	-1	MINOR
ENSMUSG00000022890	Atp5j	ENSMUST00000127651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022890	Atp5j	ENSMUST00000140036	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022890	Atp5j	ENSMUST00000023608	ENSMUSP00000023608	TRANSLATION	protein_coding	-	CCDS28283.1	1	108	0	2.33	8.8	147.5	0	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000022890	Atp5j	ENSMUST00000146225	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022890	Atp5j	ENSMUST00000144799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022890	Atp5j	ENSMUST00000150502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022890	Atp5j	ENSMUST00000155956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022890	Atp5j	ENSMUST00000114193	ENSMUSP00000109831	TRANSLATION	protein_coding	-	CCDS28283.1	2	108	0	2.33	8.8	147.5	0	-3,0	-	-	15	PRINCIPAL:1
ENSMUSG00000000325	Arvcf	ENSMUST00000150484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000325	Arvcf	ENSMUST00000115612	ENSMUSP00000111275	TRANSLATION	protein_coding	-	CCDS70693.1	1	956	0	8.514	2.7	114.6	0	-4,-5	-	-	12.586	ALTERNATIVE:2
ENSMUSG00000000325	Arvcf	ENSMUST00000155548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000325	Arvcf	ENSMUST00000232025	ENSMUSP00000155883	TRANSLATION	protein_coding	-	-	-	898	0	8.349	3.9	114.6	0	-4,-5	-	-	12.67	ALTERNATIVE:2
ENSMUSG00000000325	Arvcf	ENSMUST00000115610	ENSMUSP00000111273	TRANSLATION	protein_coding	-	CCDS70694.1	5	892	0	8.514	2.7	114.6	0	-4,-5	-	-	12.586	ALTERNATIVE:2
ENSMUSG00000000325	Arvcf	ENSMUST00000152132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000325	Arvcf	ENSMUST00000115614	ENSMUSP00000111278	TRANSLATION	protein_coding	-	CCDS70693.1	1	956	0	8.514	2.7	114.6	0	-4,-5	-	-	12.586	ALTERNATIVE:2
ENSMUSG00000000325	Arvcf	ENSMUST00000231791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000325	Arvcf	ENSMUST00000090103	ENSMUSP00000087562	TRANSLATION	protein_coding	-	CCDS28020.1	1	962	0	8.349	3.9	114.6	0	-4,-5	-	-	12.67	PRINCIPAL:3
ENSMUSG00000000325	Arvcf	ENSMUST00000232241	ENSMUSP00000156384	TRANSLATION	protein_coding	start	-	-	131	0	2.592	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000000325	Arvcf	ENSMUST00000115613	ENSMUSP00000111276	TRANSLATION	protein_coding	-	CCDS28020.1	5	962	0	8.349	3.9	114.6	0	-4,-5	-	-	12.67	PRINCIPAL:3
ENSMUSG00000000325	Arvcf	ENSMUST00000126183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000325	Arvcf	ENSMUST00000150253	ENSMUSP00000118505	TRANSLATION	protein_coding	-	CCDS70694.1	1	892	0	8.514	2.7	114.6	0	-4,-5	-	-	12.586	ALTERNATIVE:2
ENSMUSG00000022821	Hgd	ENSMUST00000162918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022821	Hgd	ENSMUST00000159938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022821	Hgd	ENSMUST00000159787	ENSMUSP00000156254	TRANSLATION	protein_coding	-	-	1	404	3	10.15	0	647.6	0	-4,-7	-	-	6.072	MINOR
ENSMUSG00000022821	Hgd	ENSMUST00000161193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022821	Hgd	ENSMUST00000160847	ENSMUSP00000125492	TRANSLATION	protein_coding	-	CCDS49849.1	1	445	3	11.83	8.8	740.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059113	Gm10061	ENSMUST00000073111	ENSMUSP00000072854	TRANSLATION	protein_coding	-	-	-	54	0	0	0.5	33	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075370	Igll1	ENSMUST00000231439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075370	Igll1	ENSMUST00000100136	ENSMUSP00000097713	TRANSLATION	protein_coding	-	CCDS49775.1	5	209	0	1.8	1.5	94.6	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071552	Tigit	ENSMUST00000096065	ENSMUSP00000093770	TRANSLATION	protein_coding	-	CCDS49852.1	1	241	0	1.4	1.5	41.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000004070	Hmox2	ENSMUST00000118885	ENSMUSP00000113110	TRANSLATION	protein_coding	-	CCDS27924.1	1	315	22	5.43	6.3	270.1	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004070	Hmox2	ENSMUST00000120232	ENSMUSP00000112397	TRANSLATION	protein_coding	-	CCDS27924.1	1	315	22	5.43	6.3	270.1	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000004070	Hmox2	ENSMUST00000121529	ENSMUSP00000112378	TRANSLATION	protein_coding	stop	-	2	228	20	4.43	0	261.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004070	Hmox2	ENSMUST00000154117	ENSMUSP00000122699	TRANSLATION	protein_coding	stop	-	2	65	0	1.33	0	70.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004070	Hmox2	ENSMUST00000140367	ENSMUSP00000115932	TRANSLATION	protein_coding	stop	-	2	93	6	2.43	0	67.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004070	Hmox2	ENSMUST00000004172	ENSMUSP00000004172	TRANSLATION	protein_coding	-	CCDS27924.1	1	315	22	5.43	6.3	270.1	1	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090176	Cd200r2	ENSMUST00000102805	ENSMUSP00000099869	TRANSLATION	protein_coding	-	CCDS28191.1	1	249	3	2	0.5	70.2	0	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000022657	Cd96	ENSMUST00000023336	ENSMUSP00000023336	TRANSLATION	protein_coding	-	CCDS37348.1	1	602	0	2.86	1.5	23.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022636	Alcam	ENSMUST00000164888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022636	Alcam	ENSMUST00000168071	ENSMUSP00000131001	TRANSLATION	protein_coding	-	-	1	133	0	2.75	1.2	0	0	4,-1	-	-	0.093	MINOR
ENSMUSG00000022636	Alcam	ENSMUST00000167115	ENSMUSP00000130563	TRANSLATION	protein_coding	start	-	5	345	0	8.25	0	68.9	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000022636	Alcam	ENSMUST00000163788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022636	Alcam	ENSMUST00000164728	ENSMUSP00000127141	TRANSLATION	protein_coding	-	-	5	555	0	13	1.2	110.4	2	4,-1	-	-	10.593	MINOR
ENSMUSG00000022636	Alcam	ENSMUST00000023312	ENSMUSP00000023312	TRANSLATION	protein_coding	-	CCDS37356.1	1	583	0	13.75	7.5	110.4	2	4,-1	-	-	15	PRINCIPAL:3
ENSMUSG00000022636	Alcam	ENSMUST00000170035	ENSMUSP00000129714	TRANSLATION	protein_coding	-	CCDS84242.1	5	570	0	13.25	7.5	110.4	2	4,-1	-	-	13.998	ALTERNATIVE:1
ENSMUSG00000022650	Retnlb	ENSMUST00000023328	ENSMUSP00000023328	TRANSLATION	protein_coding	-	CCDS28210.1	1	105	0	2.75	1.5	112.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000047714	Ppp1r2	ENSMUST00000060188	ENSMUSP00000060118	TRANSLATION	protein_coding	-	CCDS28104.1	1	206	0	5.25	6.3	146	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000047714	Ppp1r2	ENSMUST00000115233	ENSMUSP00000110888	TRANSLATION	protein_coding	-	-	1	195	0	4.75	0	146	0	-4,-2	-	-	10.998	MINOR
ENSMUSG00000034206	Polq	ENSMUST00000071452	ENSMUSP00000071396	TRANSLATION	protein_coding	-	CCDS49845.1	1	2265	15	23.8	0.5	411.3	0	-4,-2	-	-	8.106	MINOR
ENSMUSG00000034206	Polq	ENSMUST00000054034	ENSMUSP00000059757	TRANSLATION	protein_coding	-	CCDS28158.1	1	2544	15	28.8	0.5	476.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034206	Polq	ENSMUST00000183112	ENSMUSP00000138648	TRANSLATION	nonsense_mediated_decay	-	-	2	177	11	3	0	28.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034206	Polq	ENSMUST00000182717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034206	Polq	ENSMUST00000182946	ENSMUSP00000138685	TRANSLATION	nonsense_mediated_decay	-	-	2	177	11	3	0	28.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034206	Polq	ENSMUST00000182622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034206	Polq	ENSMUST00000182163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092470	Gm20518	ENSMUST00000150068	ENSMUSP00000115071	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	580	4	1.64	0	117.3	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000074991	Gabrr3	ENSMUST00000114341	ENSMUSP00000109980	TRANSLATION	protein_coding	-	CCDS37371.1	1	464	5	5.5	1.5	276.5	0	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000022858	Tra2b	ENSMUST00000232411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022858	Tra2b	ENSMUST00000232471	ENSMUSP00000156222	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022858	Tra2b	ENSMUST00000159946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022858	Tra2b	ENSMUST00000160579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022858	Tra2b	ENSMUST00000231312	ENSMUSP00000156348	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022858	Tra2b	ENSMUST00000161286	ENSMUSP00000124846	TRANSLATION	protein_coding	-	CCDS37297.1	1	288	0	2.76	8.8	77.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022858	Tra2b	ENSMUST00000162413	ENSMUSP00000123782	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022858	Tra2b	ENSMUST00000023564	ENSMUSP00000023564	TRANSLATION	protein_coding	-	CCDS84216.1	3	188	0	2.48	7.5	77.3	0	-4,-7	-	-	13.893	MINOR
ENSMUSG00000022858	Tra2b	ENSMUST00000161774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038037	Socs1	ENSMUST00000038099	ENSMUSP00000038121	TRANSLATION	protein_coding	-	CCDS27952.1	1	212	0	0.6	1.5	63.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000038037	Socs1	ENSMUST00000229866	ENSMUSP00000155530	TRANSLATION	protein_coding	-	CCDS27952.1	-	212	0	0.6	1.5	63.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022507	1810013L24Rik	ENSMUST00000229318	ENSMUSP00000155131	TRANSLATION	protein_coding	start	-	-	123	0	0	0	188.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022507	1810013L24Rik	ENSMUST00000023150	ENSMUSP00000023150	TRANSLATION	protein_coding	-	CCDS49756.1	1	275	0	0	9.6	344.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035578	Iqcg	ENSMUST00000231235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035578	Iqcg	ENSMUST00000040309	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035578	Iqcg	ENSMUST00000133219	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035578	Iqcg	ENSMUST00000126793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035578	Iqcg	ENSMUST00000115100	ENSMUSP00000110752	TRANSLATION	protein_coding	-	CCDS37316.1	1	419	0	1.8	0.5	20.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059043	Olfr15	ENSMUST00000214238	ENSMUSP00000149504	TRANSLATION	protein_coding	-	CCDS27910.1	5	312	0	0.3	2.7	174.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059043	Olfr15	ENSMUST00000214590	ENSMUSP00000150757	TRANSLATION	protein_coding	-	CCDS27910.1	5	312	0	0.3	2.7	174.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059043	Olfr15	ENSMUST00000080917	ENSMUSP00000079720	TRANSLATION	protein_coding	-	CCDS27910.1	-	312	0	0.3	2.7	174.6	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068535	Olfr169	ENSMUST00000216070	ENSMUSP00000150528	TRANSLATION	protein_coding	-	CCDS28037.1	5	313	0	0.42	5.1	154.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068535	Olfr169	ENSMUST00000215476	ENSMUSP00000150917	TRANSLATION	protein_coding	-	CCDS28037.1	5	313	0	0.42	5.1	154.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068535	Olfr169	ENSMUST00000090062	ENSMUSP00000087516	TRANSLATION	protein_coding	-	CCDS28037.1	-	313	0	0.42	5.1	154.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000068535	Olfr169	ENSMUST00000215040	ENSMUSP00000149087	TRANSLATION	protein_coding	-	CCDS28037.1	5	313	0	0.42	5.1	154.4	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000116636	Gm20741	ENSMUST00000232664	ENSMUSP00000156212	TRANSLATION	protein_coding	-	-	-	164	0	0	0	83.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022802	Lmln	ENSMUST00000155920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022802	Lmln	ENSMUST00000140504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022802	Lmln	ENSMUST00000153549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022802	Lmln	ENSMUST00000023497	ENSMUSP00000023497	TRANSLATION	protein_coding	-	CCDS28127.1	1	681	4	2.44	0.5	0	0	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000022871	Fetub	ENSMUST00000023587	ENSMUSP00000023587	TRANSLATION	protein_coding	-	CCDS37300.1	1	388	0	0	0.5	75.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022871	Fetub	ENSMUST00000116625	ENSMUSP00000112324	TRANSLATION	protein_coding	-	CCDS49799.1	1	308	0	0	0.5	48.3	0	-4,-7	-	-	3.846	MINOR
ENSMUSG00000022871	Fetub	ENSMUST00000232097	ENSMUSP00000155898	TRANSLATION	protein_coding	-	CCDS37300.1	-	388	0	0	0.5	75.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022871	Fetub	ENSMUST00000231880	ENSMUSP00000156318	TRANSLATION	protein_coding	stop	-	-	232	0	0	0	48.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022871	Fetub	ENSMUST00000170805	ENSMUSP00000128989	TRANSLATION	protein_coding	-	CCDS37300.1	1	388	0	0	0.5	75.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022871	Fetub	ENSMUST00000167399	ENSMUSP00000128745	TRANSLATION	protein_coding	-	CCDS37300.1	1	388	0	0	0.5	75.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022871	Fetub	ENSMUST00000231768	ENSMUSP00000156347	TRANSLATION	protein_coding	-	CCDS37300.1	-	388	0	0	0.5	75.3	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000076934	Iglv1	ENSMUST00000103746	ENSMUSP00000100462	TRANSLATION	IG_V_gene	stop	-	-	117	2	1.5	0	47.3	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000022961	Son	ENSMUST00000133589	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022961	Son	ENSMUST00000114036	ENSMUSP00000109670	TRANSLATION	protein_coding	-	CCDS37400.1	5	2126	0	0.32	0.5	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000022961	Son	ENSMUST00000122302	ENSMUSP00000113615	TRANSLATION	protein_coding	-	-	5	454	0	0	1.2	93.3	0	-4,-5	-	-	3.108	MINOR
ENSMUSG00000022961	Son	ENSMUST00000114037	ENSMUSP00000109671	TRANSLATION	protein_coding	-	CCDS37399.1	1	2444	0	0.32	0.5	130.6	0	-4,-5	-	-	11.346	PRINCIPAL:2
ENSMUSG00000022961	Son	ENSMUST00000232108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022961	Son	ENSMUST00000145235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022961	Son	ENSMUST00000119368	ENSMUSP00000113129	TRANSLATION	protein_coding	-	-	5	2321	0	0.32	0.5	37.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000022961	Son	ENSMUST00000146079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022961	Son	ENSMUST00000147891	ENSMUSP00000122544	TRANSLATION	nonsense_mediated_decay	start	-	1	478	0	0.32	0	38.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022961	Son	ENSMUST00000129167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022961	Son	ENSMUST00000151503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022961	Son	ENSMUST00000140312	ENSMUSP00000122320	TRANSLATION	nonsense_mediated_decay	-	-	5	2343	0	0.32	0	37.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022961	Son	ENSMUST00000117633	ENSMUSP00000112453	TRANSLATION	protein_coding	-	-	5	2477	0	0.32	0.5	141.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022961	Son	ENSMUST00000147461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033031	Cip2a	ENSMUST00000048374	ENSMUSP00000044714	TRANSLATION	protein_coding	-	CCDS49867.1	1	907	0	14.685	7.5	0	0	-4,-7	-	-	8.868	PRINCIPAL:1
ENSMUSG00000033031	Cip2a	ENSMUST00000130080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033031	Cip2a	ENSMUST00000149004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033031	Cip2a	ENSMUST00000123975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033031	Cip2a	ENSMUST00000127995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033031	Cip2a	ENSMUST00000125278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033031	Cip2a	ENSMUST00000133754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033031	Cip2a	ENSMUST00000117994	ENSMUSP00000113075	TRANSLATION	protein_coding	-	-	5	907	0	14.751	0	0	0	-4,-7	-	-	6	MINOR
ENSMUSG00000062400	Krtap6-5	ENSMUST00000074637	ENSMUSP00000074211	TRANSLATION	protein_coding	-	CCDS37390.1	-	78	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000052299	Ltn1	ENSMUST00000039449	ENSMUSP00000038775	TRANSLATION	protein_coding	-	CCDS37382.1	1	1767	7	2.22	1.7	27.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000052299	Ltn1	ENSMUST00000232095	ENSMUSP00000156299	TRANSLATION	protein_coding	-	-	-	724	0	2.22	0	0	0	-4,-7	-	-	6	MINOR
ENSMUSG00000051003	Olfr161	ENSMUST00000216259	ENSMUSP00000150825	TRANSLATION	protein_coding	-	CCDS27906.1	5	313	0	0.42	3.9	201.4	4	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051003	Olfr161	ENSMUST00000061541	ENSMUSP00000058956	TRANSLATION	protein_coding	-	CCDS27906.1	-	313	0	0.42	3.9	201.4	4	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000099908	Gm28539	ENSMUST00000190050	ENSMUSP00000141101	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	92	0	0	0	41.6	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000022528	Hes1	ENSMUST00000161839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022528	Hes1	ENSMUST00000160592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022528	Hes1	ENSMUST00000023171	ENSMUSP00000023171	TRANSLATION	protein_coding	-	CCDS28098.1	1	282	0	2.6	1.5	122	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022528	Hes1	ENSMUST00000161676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000089774	Slc5a3	ENSMUST00000113975	ENSMUSP00000109608	TRANSLATION	protein_coding	-	CCDS37403.1	1	718	0	0.48	8.8	536.8	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000089774	Slc5a3	ENSMUST00000131098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022503	Nubp1	ENSMUST00000143617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022503	Nubp1	ENSMUST00000140157	ENSMUSP00000155550	TRANSLATION	nonsense_mediated_decay	-	-	3	121	7	2.08	0	83.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022503	Nubp1	ENSMUST00000129280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022503	Nubp1	ENSMUST00000023146	ENSMUSP00000023146	TRANSLATION	protein_coding	-	CCDS27948.1	1	320	13	5.53	5.2	334.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022503	Nubp1	ENSMUST00000156338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022503	Nubp1	ENSMUST00000142771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022656	Nectin3	ENSMUST00000096052	ENSMUSP00000093757	TRANSLATION	protein_coding	-	CCDS28205.1	1	438	3	4.7	0.5	109.2	4	-1,-4	-	-	15	MINOR
ENSMUSG00000022656	Nectin3	ENSMUST00000149901	ENSMUSP00000117479	TRANSLATION	protein_coding	start/stop	-	3	244	0	2.8	0	45.8	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000022656	Nectin3	ENSMUST00000132089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022656	Nectin3	ENSMUST00000119941	ENSMUSP00000113301	TRANSLATION	protein_coding	-	-	3	93	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022656	Nectin3	ENSMUST00000124602	ENSMUSP00000115927	TRANSLATION	protein_coding	start	-	3	122	0	0.2	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000022656	Nectin3	ENSMUST00000023334	ENSMUSP00000023334	TRANSLATION	protein_coding	-	CCDS28206.1	1	549	3	4.5	5.3	109.2	1	-1,-4	-	-	16.22	PRINCIPAL:4
ENSMUSG00000022656	Nectin3	ENSMUST00000133935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022656	Nectin3	ENSMUST00000121245	ENSMUSP00000113146	TRANSLATION	protein_coding	-	-	3	185	0	0.2	0	0	4	-4,-5	-	-	0	MINOR
ENSMUSG00000022656	Nectin3	ENSMUST00000023335	ENSMUSP00000023335	TRANSLATION	protein_coding	-	CCDS28204.1	1	510	3	4.7	6.3	109.2	4	-1,-4	-	-	17	ALTERNATIVE:1
ENSMUSG00000022656	Nectin3	ENSMUST00000121803	ENSMUSP00000112567	TRANSLATION	protein_coding	-	-	2	100	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000071550	Cfap44	ENSMUST00000127303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071550	Cfap44	ENSMUST00000128916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071550	Cfap44	ENSMUST00000099742	ENSMUSP00000097331	TRANSLATION	protein_coding	-	CCDS49854.1	5	1843	0	4.33	0.5	34.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071550	Cfap44	ENSMUST00000142648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071550	Cfap44	ENSMUST00000147988	ENSMUSP00000156229	TRANSLATION	non_stop_decay	stop	-	1	178	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071550	Cfap44	ENSMUST00000136514	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071550	Cfap44	ENSMUST00000120049	ENSMUSP00000113908	TRANSLATION	protein_coding	-	CCDS49854.1	5	1843	0	4.33	0.5	34.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037972	Snn	ENSMUST00000228962	ENSMUSP00000154936	TRANSLATION	protein_coding	-	CCDS37255.1	-	88	0	1	17.5	136.3	1	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000037972	Snn	ENSMUST00000089011	ENSMUSP00000086405	TRANSLATION	protein_coding	-	CCDS37255.1	1	88	0	1	17.5	136.3	1	-2,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043050	Tnp2	ENSMUST00000051297	ENSMUSP00000053078	TRANSLATION	protein_coding	-	CCDS27953.1	1	117	0	0	1.5	107.4	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000005262	Ufd1	ENSMUST00000171789	ENSMUSP00000131977	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005262	Ufd1	ENSMUST00000172451	ENSMUSP00000133217	TRANSLATION	protein_coding	start	-	2	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005262	Ufd1	ENSMUST00000170325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005262	Ufd1	ENSMUST00000172013	ENSMUSP00000128186	TRANSLATION	nonsense_mediated_decay	-	-	5	58	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005262	Ufd1	ENSMUST00000163695	ENSMUSP00000132341	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	1.66	0	37.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005262	Ufd1	ENSMUST00000166352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005262	Ufd1	ENSMUST00000164795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005262	Ufd1	ENSMUST00000232311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005262	Ufd1	ENSMUST00000168822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005262	Ufd1	ENSMUST00000115578	ENSMUSP00000111241	TRANSLATION	protein_coding	-	CCDS28028.1	5	307	0	6.09	19	266.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000005262	Ufd1	ENSMUST00000005394	ENSMUSP00000005394	TRANSLATION	protein_coding	-	CCDS28028.1	1	307	0	6.09	19	266.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000052917	Senp7	ENSMUST00000202000	ENSMUSP00000144116	TRANSLATION	protein_coding	-	CCDS84243.1	2	291	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000052917	Senp7	ENSMUST00000201391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052917	Senp7	ENSMUST00000201011	ENSMUSP00000156009	TRANSLATION	protein_coding	-	-	1	227	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000052917	Senp7	ENSMUST00000201476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052917	Senp7	ENSMUST00000202272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052917	Senp7	ENSMUST00000089360	ENSMUSP00000086776	TRANSLATION	protein_coding	-	-	5	1010	5	8.55	0.5	114.5	0	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000052917	Senp7	ENSMUST00000201218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052917	Senp7	ENSMUST00000202159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052917	Senp7	ENSMUST00000201915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052917	Senp7	ENSMUST00000200714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052917	Senp7	ENSMUST00000202799	ENSMUSP00000144348	TRANSLATION	protein_coding	stop	-	1	211	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052917	Senp7	ENSMUST00000202108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052917	Senp7	ENSMUST00000049128	ENSMUSP00000043023	TRANSLATION	protein_coding	-	CCDS28223.1	1	254	0	0	0.5	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000052917	Senp7	ENSMUST00000201418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052917	Senp7	ENSMUST00000089362	ENSMUSP00000086779	TRANSLATION	protein_coding	-	CCDS28222.1	1	1037	5	8.55	1.5	114.5	0	-4,-7	-	-	17	PRINCIPAL:2
ENSMUSG00000022849	Hspbap1	ENSMUST00000231579	ENSMUSP00000156217	TRANSLATION	protein_coding	-	CCDS28142.1	-	483	12	3.605	0.5	122.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022849	Hspbap1	ENSMUST00000231802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022849	Hspbap1	ENSMUST00000023555	ENSMUSP00000023555	TRANSLATION	nonsense_mediated_decay	-	-	1	253	8	1.53	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022972	Cfap298	ENSMUST00000129345	ENSMUSP00000122163	TRANSLATION	protein_coding	start	-	5	156	0	0	0	51.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022972	Cfap298	ENSMUST00000149833	ENSMUSP00000123417	TRANSLATION	protein_coding	stop	-	5	198	0	0	0	35.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022972	Cfap298	ENSMUST00000023694	ENSMUSP00000023694	TRANSLATION	protein_coding	-	CCDS28321.1	1	290	0	0	12.8	150	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022972	Cfap298	ENSMUST00000131583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022972	Cfap298	ENSMUST00000142340	ENSMUSP00000120107	TRANSLATION	protein_coding	stop	-	5	150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022972	Cfap298	ENSMUST00000231711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022972	Cfap298	ENSMUST00000125519	ENSMUSP00000117691	TRANSLATION	nonsense_mediated_decay	-	-	5	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022673	Mcm4	ENSMUST00000230437	ENSMUSP00000155284	TRANSLATION	protein_coding	start/stop	-	-	220	4	3.61	0	80.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022673	Mcm4	ENSMUST00000229606	ENSMUSP00000155603	TRANSLATION	protein_coding	start	-	-	86	0	1.54	0	55.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022673	Mcm4	ENSMUST00000023353	ENSMUSP00000023353	TRANSLATION	protein_coding	-	CCDS27977.1	1	862	20	11.05	3.9	645.5	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000022659	Gcsam	ENSMUST00000161347	ENSMUSP00000123853	TRANSLATION	protein_coding	-	CCDS49861.1	1	181	0	0	1.5	128.7	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000022659	Gcsam	ENSMUST00000023339	ENSMUSP00000023339	TRANSLATION	protein_coding	-	CCDS28199.1	1	159	0	0	1.5	128.7	0	-4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000051802	Krtap19-5	ENSMUST00000053460	ENSMUSP00000055511	TRANSLATION	protein_coding	-	CCDS37388.1	-	62	0	0	0.5	40.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061080	Lsamp	ENSMUST00000187185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061080	Lsamp	ENSMUST00000187695	ENSMUSP00000139667	TRANSLATION	protein_coding	-	-	1	355	0	5.6	0	231	0	3,-2	-	-	12	MINOR
ENSMUSG00000061080	Lsamp	ENSMUST00000133853	ENSMUSP00000139655	TRANSLATION	protein_coding	start	-	3	99	0	2.0886	0	54.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061080	Lsamp	ENSMUST00000099761	ENSMUSP00000097349	TRANSLATION	protein_coding	-	CCDS84234.1	1	338	0	5.6	12.8	231	0	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000061080	Lsamp	ENSMUST00000078873	ENSMUSP00000077913	TRANSLATION	protein_coding	-	-	1	341	0	5.32	0.5	231	0	0,-3	-	-	11.442	MINOR
ENSMUSG00000061080	Lsamp	ENSMUST00000145951	ENSMUSP00000115823	TRANSLATION	protein_coding	start	-	3	139	0	2.9686	0	65.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061080	Lsamp	ENSMUST00000189229	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061080	Lsamp	ENSMUST00000191610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061080	Lsamp	ENSMUST00000189829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061080	Lsamp	ENSMUST00000189358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035270	Impg2	ENSMUST00000159842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035270	Impg2	ENSMUST00000160116	ENSMUSP00000125135	TRANSLATION	protein_coding	-	-	1	1134	4	0	0	96.1	1	4,-1	-	-	10	ALTERNATIVE:2
ENSMUSG00000035270	Impg2	ENSMUST00000069936	ENSMUSP00000063648	TRANSLATION	protein_coding	-	CCDS37358.1	1	1243	4	0	0.5	96.1	1	4,-1	-	-	10	PRINCIPAL:2
ENSMUSG00000035270	Impg2	ENSMUST00000069778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043336	Filip1l	ENSMUST00000159816	ENSMUSP00000124179	TRANSLATION	protein_coding	-	CCDS37366.2	1	1131	0	0	0.5	208.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000043336	Filip1l	ENSMUST00000159414	ENSMUSP00000124069	TRANSLATION	protein_coding	-	CCDS49877.1	1	893	0	0	4.1	0	0	-4,-5	-	-	1	MINOR
ENSMUSG00000043336	Filip1l	ENSMUST00000099667	ENSMUSP00000133252	TRANSLATION	protein_coding	-	-	1	201	0	0	0	171.9	0	-4,-7	-	-	3.798	MINOR
ENSMUSG00000039929	Urb1	ENSMUST00000142955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039929	Urb1	ENSMUST00000140158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039929	Urb1	ENSMUST00000140920	ENSMUSP00000114717	TRANSLATION	protein_coding	-	CCDS49905.1	5	2277	0	0	1.5	466.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039929	Urb1	ENSMUST00000140942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039929	Urb1	ENSMUST00000128989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022505	Emp2	ENSMUST00000078357	ENSMUSP00000077466	TRANSLATION	protein_coding	-	CCDS37250.1	1	172	0	0	1.5	196.7	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000022505	Emp2	ENSMUST00000230141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022494	Shisa9	ENSMUST00000182154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022494	Shisa9	ENSMUST00000229804	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022494	Shisa9	ENSMUST00000023138	ENSMUSP00000023138	TRANSLATION	protein_coding	-	CCDS49767.1	1	408	0	0.2	0.5	179.1	1	2,2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022494	Shisa9	ENSMUST00000182889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022494	Shisa9	ENSMUST00000232469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022494	Shisa9	ENSMUST00000170672	ENSMUSP00000132646	TRANSLATION	protein_coding	-	CCDS49766.1	1	424	0	0.2	1.7	179.1	1	2,2	-	-	12	PRINCIPAL:4
ENSMUSG00000039789	Zfp597	ENSMUST00000138857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039789	Zfp597	ENSMUST00000119599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039789	Zfp597	ENSMUST00000090522	ENSMUSP00000088009	TRANSLATION	protein_coding	-	CCDS27911.1	1	419	28	0.4	1.5	164.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039789	Zfp597	ENSMUST00000130254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039789	Zfp597	ENSMUST00000175990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022911	Arl13b	ENSMUST00000132902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022911	Arl13b	ENSMUST00000089289	ENSMUSP00000086703	TRANSLATION	protein_coding	-	CCDS28261.1	5	427	16	4.52	1.5	140.8	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022911	Arl13b	ENSMUST00000141665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022911	Arl13b	ENSMUST00000232561	ENSMUSP00000156207	TRANSLATION	protein_coding	stop	-	-	126	7	2.35	0	38.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022912	Pros1	ENSMUST00000127502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022912	Pros1	ENSMUST00000023629	ENSMUSP00000023629	TRANSLATION	protein_coding	-	CCDS28263.1	1	675	4	10.33	3.9	263.7	0	3,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000022912	Pros1	ENSMUST00000155940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000125926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033581	Igf2bp2	ENSMUST00000100052	ENSMUSP00000097629	TRANSLATION	protein_coding	-	CCDS49797.1	1	592	0	9.51	1.5	258.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033581	Igf2bp2	ENSMUST00000231926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033581	Igf2bp2	ENSMUST00000232504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033581	Igf2bp2	ENSMUST00000124318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000151087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033581	Igf2bp2	ENSMUST00000129913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000146885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000134188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000127696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033581	Igf2bp2	ENSMUST00000115379	ENSMUSP00000111037	TRANSLATION	protein_coding	-	-	1	524	0	8.18	1	224.3	0	-4,-7	-	-	7.284	MINOR
ENSMUSG00000048810	Olfr202	ENSMUST00000217485	ENSMUSP00000151058	TRANSLATION	protein_coding	-	CCDS28252.1	5	307	0	0.36	2.7	158.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048810	Olfr202	ENSMUST00000201687	ENSMUSP00000144622	TRANSLATION	protein_coding	-	CCDS28252.1	5	307	0	0.36	2.7	158.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048810	Olfr202	ENSMUST00000049859	ENSMUSP00000059496	TRANSLATION	protein_coding	-	CCDS28252.1	-	307	0	0.36	2.7	158.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033149	Phldb2	ENSMUST00000133111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033149	Phldb2	ENSMUST00000076333	ENSMUSP00000075672	TRANSLATION	protein_coding	-	CCDS57031.1	1	1302	11	1.56	0.5	53.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033149	Phldb2	ENSMUST00000125433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033149	Phldb2	ENSMUST00000136317	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033149	Phldb2	ENSMUST00000036355	ENSMUSP00000046496	TRANSLATION	protein_coding	-	CCDS28202.1	1	1249	11	1.56	0.5	53.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000033149	Phldb2	ENSMUST00000136405	ENSMUSP00000121800	TRANSLATION	protein_coding	stop	-	3	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033149	Phldb2	ENSMUST00000134802	ENSMUSP00000123284	TRANSLATION	protein_coding	stop	-	1	1131	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033149	Phldb2	ENSMUST00000131003	ENSMUSP00000119718	TRANSLATION	protein_coding	start	-	1	565	11	1.56	0	53.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033149	Phldb2	ENSMUST00000151300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033149	Phldb2	ENSMUST00000128365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033149	Phldb2	ENSMUST00000142697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062203	Gspt1	ENSMUST00000166063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062203	Gspt1	ENSMUST00000080030	ENSMUSP00000078940	TRANSLATION	protein_coding	-	CCDS27961.2	1	636	16	10.68	0.5	319.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000062203	Gspt1	ENSMUST00000229660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062203	Gspt1	ENSMUST00000167571	ENSMUSP00000130583	TRANSLATION	protein_coding	-	CCDS49764.1	1	635	16	10.68	0.5	319.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000062203	Gspt1	ENSMUST00000167025	ENSMUSP00000130959	TRANSLATION	protein_coding	start	-	3	100	0	2.25	0	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062203	Gspt1	ENSMUST00000164098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022832	Ropn1	ENSMUST00000148562	ENSMUSP00000122122	TRANSLATION	protein_coding	stop	-	3	154	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022832	Ropn1	ENSMUST00000023530	ENSMUSP00000023530	TRANSLATION	protein_coding	-	CCDS28137.1	1	212	0	1	10.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022832	Ropn1	ENSMUST00000231612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032965	Ift57	ENSMUST00000140914	ENSMUSP00000116412	TRANSLATION	protein_coding	start	-	1	301	0	0	0	271.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000032965	Ift57	ENSMUST00000127784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032965	Ift57	ENSMUST00000046777	ENSMUSP00000046645	TRANSLATION	protein_coding	-	CCDS28211.1	1	429	0	0	6.3	506.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000032965	Ift57	ENSMUST00000142682	ENSMUSP00000117882	TRANSLATION	protein_coding	-	-	1	344	0	0	0	434.3	0	-3,-6	-	-	1.686	MINOR
ENSMUSG00000004071	Cdip1	ENSMUST00000229452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004071	Cdip1	ENSMUST00000152667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004071	Cdip1	ENSMUST00000004173	ENSMUSP00000004173	TRANSLATION	protein_coding	-	CCDS27925.1	1	208	3	0	7.5	77.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004071	Cdip1	ENSMUST00000117713	ENSMUSP00000113618	TRANSLATION	protein_coding	-	-	1	191	3	0	0	77.1	0	-4,-5	-	-	9	MINOR
ENSMUSG00000004071	Cdip1	ENSMUST00000147225	ENSMUSP00000120143	TRANSLATION	protein_coding	start	-	3	164	2	0	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004071	Cdip1	ENSMUST00000118703	ENSMUSP00000113889	TRANSLATION	protein_coding	-	CCDS27925.1	1	208	3	0	7.5	77.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004071	Cdip1	ENSMUST00000140187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022704	Qtrt2	ENSMUST00000239112	ENSMUSP00000158885	TRANSLATION	protein_coding	-	-	-	416	4	1.7	7.5	227.2	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000022704	Qtrt2	ENSMUST00000023387	ENSMUSP00000023387	TRANSLATION	protein_coding	-	CCDS37344.1	1	345	4	1.3	1.5	189.2	0	-4,-6	-	-	12.541	MINOR
ENSMUSG00000022704	Qtrt2	ENSMUST00000124674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022704	Qtrt2	ENSMUST00000143858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022704	Qtrt2	ENSMUST00000144626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022704	Qtrt2	ENSMUST00000131360	ENSMUSP00000159013	TRANSLATION	nonsense_mediated_decay	-	-	5	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022704	Qtrt2	ENSMUST00000151963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022704	Qtrt2	ENSMUST00000146343	ENSMUSP00000159054	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022704	Qtrt2	ENSMUST00000156568	ENSMUSP00000159132	TRANSLATION	nonsense_mediated_decay	-	-	1	271	0	1	0	64.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022704	Qtrt2	ENSMUST00000134792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022765	Snap29	ENSMUST00000023449	ENSMUSP00000023449	TRANSLATION	protein_coding	-	CCDS28001.1	1	260	0	3.8	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000022969	Il10rb	ENSMUST00000137612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022969	Il10rb	ENSMUST00000152729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022969	Il10rb	ENSMUST00000144215	ENSMUSP00000120485	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	1	0	34.8	0	3,-1	-	-	-1	MINOR
ENSMUSG00000022969	Il10rb	ENSMUST00000023691	ENSMUSP00000023691	TRANSLATION	protein_coding	-	CCDS37398.1	1	351	0	4.1	1.5	158.1	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022969	Il10rb	ENSMUST00000156133	ENSMUSP00000120227	TRANSLATION	nonsense_mediated_decay	-	-	1	52	0	0.1	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000022783	Spag6l	ENSMUST00000125017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022783	Spag6l	ENSMUST00000154624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022783	Spag6l	ENSMUST00000132033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022783	Spag6l	ENSMUST00000141835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022783	Spag6l	ENSMUST00000023468	ENSMUSP00000023468	TRANSLATION	protein_coding	-	CCDS27988.1	1	507	0	4.76	17.5	131.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000022783	Spag6l	ENSMUST00000147539	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022783	Spag6l	ENSMUST00000151132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022949	Clic6	ENSMUST00000023670	ENSMUSP00000023670	TRANSLATION	protein_coding	-	CCDS28338.1	1	596	17	5	0.5	52.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022949	Clic6	ENSMUST00000162181	ENSMUSP00000124498	TRANSLATION	protein_coding	stop	-	2	100	16	2.06	0	25.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023147	Get1	ENSMUST00000232832	ENSMUSP00000156449	TRANSLATION	protein_coding	-	-	-	224	0	0	0	0	3	-1,-4	-	-	0	MINOR
ENSMUSG00000023147	Get1	ENSMUST00000233273	ENSMUSP00000156729	TRANSLATION	protein_coding	-	-	-	113	0	0	0	53.1	4	-1,-4	-	-	2.334	MINOR
ENSMUSG00000023147	Get1	ENSMUST00000233566	ENSMUSP00000156461	TRANSLATION	protein_coding	-	-	-	139	0	0	0	54.1	3	-1,-4	-	-	2.394	MINOR
ENSMUSG00000023147	Get1	ENSMUST00000023913	ENSMUSP00000023913	TRANSLATION	protein_coding	-	CCDS28354.1	1	174	0	0	6.3	114.2	4	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000023147	Get1	ENSMUST00000232884	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023147	Get1	ENSMUST00000233805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023147	Get1	ENSMUST00000233227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022707	Gbe1	ENSMUST00000169432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022707	Gbe1	ENSMUST00000163832	ENSMUSP00000132603	TRANSLATION	protein_coding	-	-	5	702	9	15.5	0.5	192.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022707	Gbe1	ENSMUST00000099628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022707	Gbe1	ENSMUST00000171132	ENSMUSP00000127642	TRANSLATION	protein_coding	-	-	1	660	9	14.2	0	149.3	0	-4,-5	-	-	12.81	MINOR
ENSMUSG00000022707	Gbe1	ENSMUST00000164300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022707	Gbe1	ENSMUST00000170464	ENSMUSP00000131320	TRANSLATION	protein_coding	-	-	5	702	9	15.5	0.5	192.4	0	-4,-5	-	-	17.994	ALTERNATIVE:2
ENSMUSG00000022707	Gbe1	ENSMUST00000023393	ENSMUSP00000023393	TRANSLATION	protein_coding	-	-	5	702	9	15.5	0.5	192.4	0	-4,-5	-	-	17.994	PRINCIPAL:5
ENSMUSG00000022744	Cldnd1	ENSMUST00000162057	ENSMUSP00000125497	TRANSLATION	protein_coding	-	CCDS28234.1	5	253	0	0	7.5	79.7	4	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022744	Cldnd1	ENSMUST00000162249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022744	Cldnd1	ENSMUST00000159944	ENSMUSP00000124455	TRANSLATION	nonsense_mediated_decay	-	-	5	99	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000022744	Cldnd1	ENSMUST00000023426	ENSMUSP00000023426	TRANSLATION	protein_coding	-	CCDS28234.1	1	253	0	0	7.5	79.7	4	-1,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022744	Cldnd1	ENSMUST00000159829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022744	Cldnd1	ENSMUST00000162191	ENSMUSP00000124461	TRANSLATION	protein_coding	stop	-	5	123	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000022787	Wdr53	ENSMUST00000135289	ENSMUSP00000156278	TRANSLATION	protein_coding	stop	-	2	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022787	Wdr53	ENSMUST00000023474	ENSMUSP00000023474	TRANSLATION	protein_coding	-	CCDS28118.1	1	358	0	2.2	2.7	50.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022787	Wdr53	ENSMUST00000141820	ENSMUSP00000156152	TRANSLATION	protein_coding	stop	-	5	258	0	1.8	0	21.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022787	Wdr53	ENSMUST00000178573	ENSMUSP00000135908	TRANSLATION	protein_coding	-	CCDS28118.1	5	358	0	2.2	2.7	50.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062901	Klhl24	ENSMUST00000231842	ENSMUSP00000155987	TRANSLATION	protein_coding	stop	-	-	136	0	0.6	0	79.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062901	Klhl24	ENSMUST00000232088	ENSMUSP00000155913	TRANSLATION	protein_coding	stop	-	-	223	0	1.6	0	155.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062901	Klhl24	ENSMUST00000232494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062901	Klhl24	ENSMUST00000231740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062901	Klhl24	ENSMUST00000023509	ENSMUSP00000023509	TRANSLATION	protein_coding	-	CCDS28042.1	1	600	0	5.54	13	358.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000034243	Golgb1	ENSMUST00000023534	ENSMUSP00000023534	TRANSLATION	protein_coding	start	-	-	165	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034243	Golgb1	ENSMUST00000114812	ENSMUSP00000110460	TRANSLATION	protein_coding	-	-	5	3197	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000034243	Golgb1	ENSMUST00000152864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034243	Golgb1	ENSMUST00000039855	ENSMUSP00000045239	TRANSLATION	protein_coding	-	CCDS49844.1	5	3238	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000034243	Golgb1	ENSMUST00000134616	ENSMUSP00000116503	TRANSLATION	protein_coding	stop	-	1	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034243	Golgb1	ENSMUST00000140266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034243	Golgb1	ENSMUST00000135800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022867	Usp25	ENSMUST00000023580	ENSMUSP00000023580	TRANSLATION	protein_coding	-	CCDS28275.1	1	1055	4	7.335	7.5	199	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000022867	Usp25	ENSMUST00000232351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022867	Usp25	ENSMUST00000232538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022867	Usp25	ENSMUST00000232047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022867	Usp25	ENSMUST00000239066	ENSMUSP00000159060	TRANSLATION	protein_coding	-	-	-	1125	4	7.335	7.5	199	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000052363	Zdhhc19	ENSMUST00000160832	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052363	Zdhhc19	ENSMUST00000064192	ENSMUSP00000070727	TRANSLATION	protein_coding	-	CCDS28122.1	1	347	10	0	0.5	107.7	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000052363	Zdhhc19	ENSMUST00000231510	ENSMUSP00000156284	TRANSLATION	protein_coding	-	-	-	251	10	0	0	107.7	3	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000052363	Zdhhc19	ENSMUST00000231293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052363	Zdhhc19	ENSMUST00000232434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090951	Olfr181	ENSMUST00000205668	ENSMUSP00000146247	TRANSLATION	protein_coding	stop	-	2	128	0	0.48	0	73.5	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000090951	Olfr181	ENSMUST00000205742	ENSMUSP00000145806	TRANSLATION	protein_coding	-	CCDS28240.1	-	317	0	0.48	1.5	172.5	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090951	Olfr181	ENSMUST00000205986	ENSMUSP00000145877	TRANSLATION	protein_coding	-	CCDS28240.1	2	317	0	0.48	1.5	172.5	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090951	Olfr181	ENSMUST00000214942	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090951	Olfr181	ENSMUST00000075361	ENSMUSP00000074825	TRANSLATION	protein_coding	-	CCDS28240.1	2	317	0	0.48	1.5	172.5	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022790	Igsf11	ENSMUST00000210186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022790	Igsf11	ENSMUST00000023478	ENSMUSP00000023478	TRANSLATION	protein_coding	-	CCDS28175.1	1	428	0	4	3.9	100.9	1	3,-2	-	-	12.935	PRINCIPAL:1
ENSMUSG00000022790	Igsf11	ENSMUST00000114706	ENSMUSP00000110354	TRANSLATION	protein_coding	-	-	1	369	0	2.8	4.1	74.6	1	-4,-5	-	-	9.022	MINOR
ENSMUSG00000022790	Igsf11	ENSMUST00000209958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022790	Igsf11	ENSMUST00000210471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048490	Nrip1	ENSMUST00000231304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048490	Nrip1	ENSMUST00000145649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048490	Nrip1	ENSMUST00000140483	ENSMUSP00000123638	TRANSLATION	protein_coding	stop	-	3	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048490	Nrip1	ENSMUST00000128871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048490	Nrip1	ENSMUST00000054178	ENSMUSP00000051726	TRANSLATION	protein_coding	-	CCDS28274.1	1	1161	0	0	0.5	1499.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048490	Nrip1	ENSMUST00000141182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048490	Nrip1	ENSMUST00000231585	ENSMUSP00000156377	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048490	Nrip1	ENSMUST00000121927	ENSMUSP00000112959	TRANSLATION	protein_coding	-	CCDS28274.1	1	1161	0	0	0.5	1499.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000006958	Chrd	ENSMUST00000231636	ENSMUSP00000156160	TRANSLATION	nonsense_mediated_decay	-	-	-	242	0	0	0	40.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000006958	Chrd	ENSMUST00000151150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006958	Chrd	ENSMUST00000007171	ENSMUSP00000007171	TRANSLATION	protein_coding	-	CCDS28059.1	1	948	0	0	1.5	203.9	0	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000006958	Chrd	ENSMUST00000115423	ENSMUSP00000111083	TRANSLATION	protein_coding	-	-	2	605	0	0	0	115.2	0	1,-2	-	-	0.678	MINOR
ENSMUSG00000006958	Chrd	ENSMUST00000232646	ENSMUSP00000156080	TRANSLATION	protein_coding	-	-	-	970	0	0	1.5	203.9	0	1,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000006958	Chrd	ENSMUST00000231698	ENSMUSP00000156323	TRANSLATION	nonsense_mediated_decay	-	-	-	349	0	0	0	40.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000006958	Chrd	ENSMUST00000231689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006958	Chrd	ENSMUST00000232104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006958	Chrd	ENSMUST00000153299	ENSMUSP00000138259	TRANSLATION	nonsense_mediated_decay	-	-	1	242	0	0	0	40.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000006958	Chrd	ENSMUST00000232020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000115219	Eef1akmt4	ENSMUST00000119224	ENSMUSP00000113772	TRANSLATION	protein_coding	-	-	2	197	14	2	0	38.6	0	-4,-6	-	-	12.678	MINOR
ENSMUSG00000115219	Eef1akmt4	ENSMUST00000115522	ENSMUSP00000111184	TRANSLATION	protein_coding	-	CCDS37290.1	1	255	14	3	2.7	86.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000044117	Bmerb1	ENSMUST00000118412	ENSMUSP00000112435	TRANSLATION	protein_coding	-	-	3	112	0	0	0	28.2	0	-4,-5	-	-	2.448	MINOR
ENSMUSG00000044117	Bmerb1	ENSMUST00000056521	ENSMUSP00000062758	TRANSLATION	protein_coding	-	CCDS27971.1	1	203	0	0	12.8	69.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000044117	Bmerb1	ENSMUST00000131608	ENSMUSP00000122790	TRANSLATION	protein_coding	stop	-	2	98	0	0	0	51.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068074	Gm10228	ENSMUST00000089105	ENSMUSP00000086506	TRANSLATION	protein_coding	-	CCDS57037.1	-	78	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000023341	Mx2	ENSMUST00000190097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023341	Mx2	ENSMUST00000190447	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000023341	Mx2	ENSMUST00000024112	ENSMUSP00000024112	TRANSLATION	protein_coding	-	-	1	655	16	11.65	0	537.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023341	Mx2	ENSMUST00000188251	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000023341	Mx2	ENSMUST00000191103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000157	Itgb2l	ENSMUST00000233827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000157	Itgb2l	ENSMUST00000000161	ENSMUSP00000000161	TRANSLATION	protein_coding	-	CCDS28358.1	1	738	5	12.85	0.5	265.3	2	3,-1	-	-	17	PRINCIPAL:2
ENSMUSG00000000157	Itgb2l	ENSMUST00000131777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000157	Itgb2l	ENSMUST00000113773	ENSMUSP00000109403	TRANSLATION	protein_coding	-	-	1	795	5	12.85	0.5	265.3	2	3,-1	-	-	17	ALTERNATIVE:2
ENSMUSG00000000157	Itgb2l	ENSMUST00000131567	ENSMUSP00000114497	TRANSLATION	nonsense_mediated_decay	-	-	1	540	5	9.75	0	265.3	0	3,-1	-	-	-1	MINOR
ENSMUSG00000075002	Ftdc1	ENSMUST00000099663	ENSMUSP00000097255	TRANSLATION	protein_coding	-	CCDS28231.1	1	176	0	2.2	0.5	51.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057650	Krtap19-2	ENSMUST00000076186	ENSMUSP00000075543	TRANSLATION	protein_coding	-	CCDS28304.1	-	141	0	0	0.5	39.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022544	Eef2kmt	ENSMUST00000132225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022544	Eef2kmt	ENSMUST00000064635	ENSMUSP00000068003	TRANSLATION	protein_coding	-	CCDS27935.1	1	335	19	1.24	1.5	208.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022544	Eef2kmt	ENSMUST00000230238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022544	Eef2kmt	ENSMUST00000139584	ENSMUSP00000123572	TRANSLATION	protein_coding	stop	-	1	322	19	1.24	0	207.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022544	Eef2kmt	ENSMUST00000129729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022544	Eef2kmt	ENSMUST00000140718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022769	Sdf2l1	ENSMUST00000023453	ENSMUSP00000023453	TRANSLATION	protein_coding	-	CCDS37270.1	1	221	0	2.6	5.3	38.2	0	2,1	-	-	14	PRINCIPAL:1
ENSMUSG00000047746	Fbxo40	ENSMUST00000075869	ENSMUSP00000075266	TRANSLATION	protein_coding	-	CCDS37337.1	1	710	16	0	0.5	292.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047746	Fbxo40	ENSMUST00000114806	ENSMUSP00000110454	TRANSLATION	protein_coding	-	CCDS37337.1	1	710	16	0	0.5	292.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000047746	Fbxo40	ENSMUST00000132511	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047746	Fbxo40	ENSMUST00000127808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043811	Rtn4r	ENSMUST00000059589	ENSMUSP00000062924	TRANSLATION	protein_coding	-	CCDS37279.1	1	473	0	1	5.1	98.2	0	1,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000003528	Slc25a1	ENSMUST00000129270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003528	Slc25a1	ENSMUST00000142022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003528	Slc25a1	ENSMUST00000150925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003528	Slc25a1	ENSMUST00000131507	ENSMUSP00000123613	TRANSLATION	protein_coding	start	-	3	197	0	3.05	0	109.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000003528	Slc25a1	ENSMUST00000003622	ENSMUSP00000003622	TRANSLATION	protein_coding	-	CCDS28014.1	1	311	0	5.11	1.5	203.5	0	-3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000003528	Slc25a1	ENSMUST00000147384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000115859	ENSMUSP00000111525	TRANSLATION	protein_coding	-	CCDS49746.1	1	171	2	0	1.5	300.4	0	-4,-5	-	-	8	PRINCIPAL:2
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000177323	ENSMUSP00000135766	TRANSLATION	protein_coding	-	-	5	175	2	0	1.2	299.8	0	-4,-6	-	-	7.964	ALTERNATIVE:2
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000123235	ENSMUSP00000135233	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	122.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000177221	ENSMUSP00000134800	TRANSLATION	protein_coding	start/stop	-	5	144	0	0	0	249	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000177519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005983	1700037C18Rik	ENSMUST00000006139	ENSMUSP00000006139	TRANSLATION	nonsense_mediated_decay	-	-	2	143	0	0	0	228.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000074928	Krtap14	ENSMUST00000189774	ENSMUSP00000139983	TRANSLATION	protein_coding	-	CCDS79476.1	-	167	0	0	1.5	174.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000074928	Krtap14	ENSMUST00000099562	ENSMUSP00000136883	TRANSLATION	protein_coding	start/stop	-	5	72	0	0	0	43.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000095992	Krtap22-2	ENSMUST00000178913	ENSMUSP00000137005	TRANSLATION	protein_coding	-	CCDS57036.1	-	67	0	0	0.5	23.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022817	Itgb5	ENSMUST00000151930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022817	Itgb5	ENSMUST00000115028	ENSMUSP00000110680	TRANSLATION	protein_coding	-	CCDS49835.1	1	799	11	13.32	3.9	558.7	2	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000022817	Itgb5	ENSMUST00000069345	ENSMUSP00000069416	TRANSLATION	protein_coding	-	CCDS28135.1	1	816	11	12.39	0.5	495.6	2	3,-2	-	-	12.354	MINOR
ENSMUSG00000022817	Itgb5	ENSMUST00000232262	ENSMUSP00000156332	TRANSLATION	protein_coding	-	-	-	486	0	8.57	0	213.6	2	-4,-5	-	-	0	MINOR
ENSMUSG00000022817	Itgb5	ENSMUST00000231409	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022817	Itgb5	ENSMUST00000148462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022817	Itgb5	ENSMUST00000134262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022514	Il1rap	ENSMUST00000166294	ENSMUSP00000128100	TRANSLATION	protein_coding	-	CCDS49814.1	1	640	0	7.87	5.1	165.7	1	0,-3	-	-	11.496	MINOR
ENSMUSG00000022514	Il1rap	ENSMUST00000174644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022514	Il1rap	ENSMUST00000023156	ENSMUSP00000023156	TRANSLATION	protein_coding	-	CCDS28089.1	1	570	0	7.59	6.3	199.9	1	0,-3	-	-	13.442	PRINCIPAL:1
ENSMUSG00000022514	Il1rap	ENSMUST00000173136	ENSMUSP00000133294	TRANSLATION	nonsense_mediated_decay	start	-	1	166	0	0.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022514	Il1rap	ENSMUST00000096129	ENSMUSP00000093843	TRANSLATION	protein_coding	-	CCDS49815.1	1	685	0	7.87	6.3	165.7	1	0,-3	-	-	11.948	MINOR
ENSMUSG00000022514	Il1rap	ENSMUST00000174202	ENSMUSP00000134202	TRANSLATION	protein_coding	-	CCDS57023.1	1	360	0	5.75	2.9	69	0	0,-3	-	-	2.474	MINOR
ENSMUSG00000022514	Il1rap	ENSMUST00000174171	ENSMUSP00000133904	TRANSLATION	nonsense_mediated_decay	-	-	5	346	0	4.75	0	30.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000034362	Csta1	ENSMUST00000161638	ENSMUSP00000125577	TRANSLATION	protein_coding	-	-	3	63	0	1.75	0	0	0	-4,-5	-	-	3.816	MINOR
ENSMUSG00000034362	Csta1	ENSMUST00000096090	ENSMUSP00000093795	TRANSLATION	protein_coding	-	CCDS37327.1	1	97	0	2.75	8.4	87.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000108763	Gm36028	ENSMUST00000205931	ENSMUSP00000146040	TRANSLATION	protein_coding	-	-	5	299	0	1.08	0	32.8	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000108763	Gm36028	ENSMUST00000205465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039639	Kcne1	ENSMUST00000166707	ENSMUSP00000130866	TRANSLATION	protein_coding	-	CCDS28336.1	1	129	0	1	5.1	202.2	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039639	Kcne1	ENSMUST00000051705	ENSMUSP00000052248	TRANSLATION	protein_coding	-	CCDS28336.1	1	129	0	1	5.1	202.2	1	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000022964	Tmem50b	ENSMUST00000133180	ENSMUSP00000120087	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022964	Tmem50b	ENSMUST00000141885	ENSMUSP00000116602	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022964	Tmem50b	ENSMUST00000023686	ENSMUSP00000023686	TRANSLATION	protein_coding	-	CCDS28328.1	1	158	0	0	17	170	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000022885	St6gal1	ENSMUST00000115335	ENSMUSP00000110992	TRANSLATION	protein_coding	-	CCDS28077.1	1	403	15	5	3.9	123.1	0	-1,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022885	St6gal1	ENSMUST00000152449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022885	St6gal1	ENSMUST00000178797	ENSMUSP00000136206	TRANSLATION	protein_coding	-	CCDS28077.1	5	403	15	5	3.9	123.1	0	-1,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022885	St6gal1	ENSMUST00000023601	ENSMUSP00000023601	TRANSLATION	protein_coding	-	CCDS28077.1	1	403	15	5	3.9	123.1	0	-1,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022885	St6gal1	ENSMUST00000128050	ENSMUSP00000121865	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000004460	Dnajb11	ENSMUST00000004574	ENSMUSP00000004574	TRANSLATION	protein_coding	-	CCDS28070.1	1	358	0	5.93	9.6	218.3	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000004460	Dnajb11	ENSMUST00000166487	ENSMUSP00000126828	TRANSLATION	protein_coding	-	CCDS28070.1	1	358	0	5.93	9.6	218.3	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000004460	Dnajb11	ENSMUST00000133013	ENSMUSP00000156315	TRANSLATION	protein_coding	start	-	3	127	0	2.5	0	79.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004460	Dnajb11	ENSMUST00000178320	ENSMUSP00000137542	TRANSLATION	protein_coding	-	CCDS28070.1	5	358	0	5.93	9.6	218.3	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000022889	Mrpl39	ENSMUST00000116584	ENSMUSP00000112283	TRANSLATION	protein_coding	-	CCDS57035.1	1	336	0	8.25	3.9	0	0	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000022889	Mrpl39	ENSMUST00000133901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076937	Iglc2	ENSMUST00000103749	ENSMUSP00000100464	TRANSLATION	protein_coding	start	-	1	104	0	1	0	95	0	-4,-5	-	-	-1	PRINCIPAL:3
ENSMUSG00000076937	Iglc2	ENSMUST00000198182	ENSMUSP00000143153	TRANSLATION	IG_C_gene	start	-	-	105	0	1	0	95	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022808	Snx4	ENSMUST00000231242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022808	Snx4	ENSMUST00000231389	ENSMUSP00000156185	TRANSLATION	nonsense_mediated_decay	-	-	-	248	0	2	0	83.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022808	Snx4	ENSMUST00000023502	ENSMUSP00000023502	TRANSLATION	protein_coding	-	CCDS28129.1	1	450	0	2	6.3	83.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022808	Snx4	ENSMUST00000232228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040785	Ttc3	ENSMUST00000152117	ENSMUSP00000116896	TRANSLATION	protein_coding	stop	-	1	776	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000147046	ENSMUSP00000119265	TRANSLATION	protein_coding	stop	-	1	382	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000150346	ENSMUSP00000122726	TRANSLATION	protein_coding	stop	-	1	622	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000117648	ENSMUSP00000112801	TRANSLATION	protein_coding	-	CCDS37407.1	5	1979	8	4.62	0.5	40.4	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040785	Ttc3	ENSMUST00000127667	ENSMUSP00000122425	TRANSLATION	protein_coding	start/stop	-	5	111	0	3.02	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000153062	ENSMUSP00000115389	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000149885	ENSMUSP00000122006	TRANSLATION	protein_coding	stop	-	3	58	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000145883	ENSMUSP00000123442	TRANSLATION	protein_coding	stop	-	5	78	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000231569	ENSMUSP00000156137	TRANSLATION	protein_coding	-	-	-	1624	8	1.84	0	40.4	2	-4,-5	-	-	12.438	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000147352	ENSMUSP00000116097	TRANSLATION	protein_coding	stop	-	1	1135	0	3.38	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000232660	ENSMUSP00000156151	TRANSLATION	protein_coding	-	CCDS37407.1	-	1979	8	4.62	0.5	40.4	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040785	Ttc3	ENSMUST00000145432	ENSMUSP00000121501	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000141176	ENSMUSP00000114483	TRANSLATION	protein_coding	start/stop	-	3	209	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000231850	ENSMUSP00000156316	TRANSLATION	nonsense_mediated_decay	start	-	-	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000153988	ENSMUSP00000118763	TRANSLATION	protein_coding	stop	-	2	469	0	0.6	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000149753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040785	Ttc3	ENSMUST00000127911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040785	Ttc3	ENSMUST00000232368	ENSMUSP00000156020	TRANSLATION	nonsense_mediated_decay	start	-	-	250	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000155692	ENSMUSP00000122724	TRANSLATION	protein_coding	stop	-	1	1197	0	3.38	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000150097	ENSMUSP00000119035	TRANSLATION	protein_coding	stop	-	5	125	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000143145	ENSMUSP00000122650	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000119131	ENSMUSP00000113311	TRANSLATION	protein_coding	-	-	1	300	0	1.79	0	0	0	-4,-5	-	-	0.342	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000232395	ENSMUSP00000156023	TRANSLATION	protein_coding	-	CCDS37407.1	-	1979	8	4.62	0.5	40.4	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040785	Ttc3	ENSMUST00000139607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040785	Ttc3	ENSMUST00000122895	ENSMUSP00000123037	TRANSLATION	protein_coding	stop	-	1	1162	0	3.38	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000129536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040785	Ttc3	ENSMUST00000141192	ENSMUSP00000117530	TRANSLATION	nonsense_mediated_decay	start	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000139513	ENSMUSP00000117881	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000130960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040785	Ttc3	ENSMUST00000154243	ENSMUSP00000122439	TRANSLATION	nonsense_mediated_decay	-	-	5	106	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000141856	ENSMUSP00000117369	TRANSLATION	protein_coding	stop	-	2	128	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000151192	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040785	Ttc3	ENSMUST00000151770	ENSMUSP00000121349	TRANSLATION	protein_coding	stop	-	1	1179	0	3.38	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000154196	ENSMUSP00000156057	TRANSLATION	nonsense_mediated_decay	start	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040785	Ttc3	ENSMUST00000231915	ENSMUSP00000155956	TRANSLATION	nonsense_mediated_decay	-	-	-	325	0	2.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022534	Mefv	ENSMUST00000100222	ENSMUSP00000097795	TRANSLATION	protein_coding	-	CCDS49745.1	1	808	11	4.53	0.5	116.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022534	Mefv	ENSMUST00000229725	ENSMUSP00000154892	TRANSLATION	protein_coding	-	-	-	740	11	4.53	0.5	116.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022534	Mefv	ENSMUST00000023180	ENSMUSP00000023180	TRANSLATION	protein_coding	-	CCDS27907.1	1	767	11	4.53	0.5	116.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022973	Synj1	ENSMUST00000125032	ENSMUSP00000120399	TRANSLATION	protein_coding	start/stop	-	5	200	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000130813	ENSMUSP00000119712	TRANSLATION	protein_coding	stop	-	5	693	2	6.4642	0	237.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000156140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022973	Synj1	ENSMUST00000118390	ENSMUSP00000113518	TRANSLATION	protein_coding	start	-	5	1324	2	11.3942	0	469.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000118246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022973	Synj1	ENSMUST00000121759	ENSMUSP00000113308	TRANSLATION	protein_coding	-	CCDS49907.1	5	1607	2	11.3942	0.5	469.7	0	-4,-6	-	-	14	PRINCIPAL:4
ENSMUSG00000022973	Synj1	ENSMUST00000129041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022973	Synj1	ENSMUST00000170853	ENSMUSP00000128997	TRANSLATION	protein_coding	-	CCDS49906.1	5	1309	2	11.3942	1.7	469.7	0	-4,-6	-	-	14	ALTERNATIVE:2
ENSMUSG00000022973	Synj1	ENSMUST00000231472	ENSMUSP00000156148	TRANSLATION	nonsense_mediated_decay	start	-	-	88	2	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000129743	ENSMUSP00000123231	TRANSLATION	protein_coding	start	-	5	103	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000154276	ENSMUSP00000122675	TRANSLATION	protein_coding	start	-	5	189	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022973	Synj1	ENSMUST00000231524	ENSMUSP00000155939	TRANSLATION	protein_coding	start/stop	-	-	242	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000098274	Rpl24	ENSMUST00000137811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098274	Rpl24	ENSMUST00000128581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098274	Rpl24	ENSMUST00000126419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000098274	Rpl24	ENSMUST00000023269	ENSMUSP00000023269	TRANSLATION	protein_coding	-	CCDS28218.1	1	157	0	2.75	14.8	116.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000041720	Pi4ka	ENSMUST00000232631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000232404	ENSMUSP00000156338	TRANSLATION	protein_coding	start/stop	-	-	319	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041720	Pi4ka	ENSMUST00000231917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000231529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000232232	ENSMUSP00000156049	TRANSLATION	protein_coding	-	CCDS37271.1	-	2044	0	8.39	2.7	219.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041720	Pi4ka	ENSMUST00000231914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000231419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000231961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041720	Pi4ka	ENSMUST00000231683	ENSMUSP00000156091	TRANSLATION	nonsense_mediated_decay	start	-	-	153	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041720	Pi4ka	ENSMUST00000231651	ENSMUSP00000155976	TRANSLATION	nonsense_mediated_decay	start	-	-	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041720	Pi4ka	ENSMUST00000036161	ENSMUSP00000036162	TRANSLATION	protein_coding	-	CCDS37271.1	1	2044	0	8.39	2.7	219.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058240	Cryzl1	ENSMUST00000144877	ENSMUSP00000156317	TRANSLATION	protein_coding	start	-	2	84	0	1.9	0	35.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000128975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058240	Cryzl1	ENSMUST00000114023	ENSMUSP00000109656	TRANSLATION	protein_coding	-	-	1	231	0	5.71	0	32.1	0	-4,-5	-	-	7.902	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000141664	ENSMUSP00000156182	TRANSLATION	protein_coding	start	-	2	142	0	2.81	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000124282	ENSMUSP00000115686	TRANSLATION	protein_coding	-	-	5	300	0	6.31	3.6	0	0	-4,-5	-	-	4.422	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000140199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058240	Cryzl1	ENSMUST00000073466	ENSMUSP00000073171	TRANSLATION	protein_coding	-	CCDS37401.1	1	348	0	7.47	11.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000058240	Cryzl1	ENSMUST00000123751	ENSMUSP00000156339	TRANSLATION	protein_coding	-	-	2	28	0	0.36	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000122254	ENSMUSP00000112734	TRANSLATION	protein_coding	-	-	3	191	0	3.71	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000231499	ENSMUSP00000156258	TRANSLATION	protein_coding	stop	-	-	182	0	4.61	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000117644	ENSMUSP00000113227	TRANSLATION	protein_coding	-	CCDS57039.1	1	333	0	6.97	0.5	0	0	-4,-5	-	-	4.998	MINOR
ENSMUSG00000058240	Cryzl1	ENSMUST00000144472	ENSMUSP00000116833	TRANSLATION	protein_coding	start	-	5	220	0	4.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000229101	ENSMUSP00000155856	TRANSLATION	protein_coding	-	-	-	278	0	1.225	0	276.6	15	-4,-5	-	-	4.434	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000084838	ENSMUSP00000099853	TRANSLATION	protein_coding	-	CCDS28212.1	1	324	0	2.225	0.5	335.1	15	3,-2	-	-	10.254	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000230641	ENSMUSP00000155178	TRANSLATION	protein_coding	-	-	-	342	0	2.225	0.5	335.1	15	3,-2	-	-	10.254	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000231187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055447	Cd47	ENSMUST00000230281	ENSMUSP00000154914	TRANSLATION	protein_coding	-	-	-	258	0	1.6	0	290.5	15	-4,-6	-	-	6.132	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000230836	ENSMUSP00000155684	TRANSLATION	protein_coding	-	-	-	267	0	2.6	0	277	12	3,-2	-	-	7.632	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000114496	ENSMUSP00000110140	TRANSLATION	protein_coding	-	-	1	271	0	1.225	0	276.6	15	-4,-5	-	-	4.434	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000229640	ENSMUSP00000155544	TRANSLATION	protein_coding	-	-	-	271	0	1.225	0	276.6	15	-4,-5	-	-	4.434	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000229104	ENSMUSP00000155699	TRANSLATION	protein_coding	-	-	-	258	0	1.6	0	290.5	15	-4,-6	-	-	6.132	MINOR
ENSMUSG00000055447	Cd47	ENSMUST00000229206	ENSMUSP00000155289	TRANSLATION	protein_coding	-	-	-	321	0	2.6	1.5	349.8	15	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022508	Bcl6	ENSMUST00000023151	ENSMUSP00000023151	TRANSLATION	protein_coding	-	CCDS28082.1	1	707	23	5.4	7.5	171.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022508	Bcl6	ENSMUST00000135352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079546	Gm11146	ENSMUST00000114231	ENSMUSP00000109869	TRANSLATION	protein_coding	start/stop	-	5	32	0	0	0	0	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000041957	Pkp2	ENSMUST00000039408	ENSMUSP00000036890	TRANSLATION	protein_coding	-	CCDS27981.1	1	795	0	7.78	1.5	59.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041957	Pkp2	ENSMUST00000161342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041957	Pkp2	ENSMUST00000162150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022663	Atg3	ENSMUST00000150390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022663	Atg3	ENSMUST00000023343	ENSMUSP00000023343	TRANSLATION	protein_coding	-	CCDS28194.1	1	314	0	6.648	11.6	250.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043982	Krtap19-4	ENSMUST00000051103	ENSMUSP00000056250	TRANSLATION	protein_coding	-	CCDS37387.1	-	84	0	0	0.5	46.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022504	Ciita	ENSMUST00000230450	ENSMUSP00000155002	TRANSLATION	protein_coding	-	-	-	1054	8	3.295	1.5	183.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022504	Ciita	ENSMUST00000230395	ENSMUSP00000155517	TRANSLATION	protein_coding	-	-	-	1155	8	3.295	1.5	183.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000022504	Ciita	ENSMUST00000230533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022504	Ciita	ENSMUST00000229906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022504	Ciita	ENSMUST00000230146	ENSMUSP00000154946	TRANSLATION	protein_coding	-	-	-	1075	8	3.295	0.5	183.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000022504	Ciita	ENSMUST00000230892	ENSMUSP00000155232	TRANSLATION	protein_coding	stop	-	-	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022504	Ciita	ENSMUST00000230392	ENSMUSP00000155635	TRANSLATION	protein_coding	-	-	-	78	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000022504	Ciita	ENSMUST00000023147	ENSMUSP00000023147	TRANSLATION	protein_coding	-	CCDS27950.1	1	1078	8	3.295	0.5	183.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000045275	Lca5l	ENSMUST00000154445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045275	Lca5l	ENSMUST00000233889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045275	Lca5l	ENSMUST00000113804	ENSMUSP00000109435	TRANSLATION	protein_coding	-	-	1	730	0	0	0.5	216.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045275	Lca5l	ENSMUST00000054855	ENSMUSP00000061337	TRANSLATION	protein_coding	-	CCDS37413.1	1	735	0	0	0.5	216.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000045275	Lca5l	ENSMUST00000233151	ENSMUSP00000156726	TRANSLATION	protein_coding	-	-	-	729	0	0	0.5	216.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045275	Lca5l	ENSMUST00000142620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022840	Adcy5	ENSMUST00000114913	ENSMUSP00000110563	TRANSLATION	protein_coding	-	CCDS37322.1	1	1262	8	8.9	2.7	1303.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022840	Adcy5	ENSMUST00000232470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022971	Ifnar2	ENSMUST00000089042	ENSMUSP00000086443	TRANSLATION	protein_coding	-	CCDS84262.1	1	247	0	4.23	0.5	119.4	0	1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000022971	Ifnar2	ENSMUST00000139503	ENSMUSP00000135322	TRANSLATION	protein_coding	stop	-	1	48	0	0.92	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022971	Ifnar2	ENSMUST00000134491	ENSMUSP00000134796	TRANSLATION	protein_coding	stop	-	3	117	0	2.28	0	56.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022971	Ifnar2	ENSMUST00000023693	ENSMUSP00000023693	TRANSLATION	protein_coding	-	CCDS28325.1	1	513	0	4.23	0.5	119.4	0	1,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000022971	Ifnar2	ENSMUST00000117836	ENSMUSP00000113358	TRANSLATION	protein_coding	-	CCDS49910.1	1	248	0	4.23	0.5	119.4	0	1,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000025610	Map3k7cl	ENSMUST00000026700	ENSMUSP00000026700	TRANSLATION	protein_coding	-	CCDS28292.1	1	142	0	0	14.5	0	0	-4,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000022758	P2rx6	ENSMUST00000171002	ENSMUSP00000132727	TRANSLATION	protein_coding	-	CCDS49778.1	1	362	0	7.71	0.5	198.4	3	-4,-7	-	-	4.5	MINOR
ENSMUSG00000022758	P2rx6	ENSMUST00000023441	ENSMUSP00000023441	TRANSLATION	protein_coding	-	CCDS28007.2	1	389	0	8.46	1.5	454	3	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022758	P2rx6	ENSMUST00000231806	ENSMUSP00000156201	TRANSLATION	nonsense_mediated_decay	-	-	-	286	0	5.38	0.5	294.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000022940	Pigp	ENSMUST00000232294	ENSMUSP00000155972	TRANSLATION	protein_coding	-	CCDS28348.1	-	132	0	0	11.8	139	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022940	Pigp	ENSMUST00000113905	ENSMUSP00000109538	TRANSLATION	protein_coding	-	CCDS28348.1	1	132	0	0	11.8	139	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022940	Pigp	ENSMUST00000146924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022940	Pigp	ENSMUST00000113906	ENSMUSP00000109539	TRANSLATION	protein_coding	-	CCDS28348.1	1	132	0	0	11.8	139	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022940	Pigp	ENSMUST00000113910	ENSMUSP00000109543	TRANSLATION	protein_coding	-	CCDS49919.1	1	161	0	0	0.5	139	6	-4,-7	-	-	6	MINOR
ENSMUSG00000022940	Pigp	ENSMUST00000113914	ENSMUSP00000109547	TRANSLATION	protein_coding	-	CCDS49920.1	1	205	0	0	0.5	139	6	-4,-1	-	-	6	MINOR
ENSMUSG00000022940	Pigp	ENSMUST00000138514	ENSMUSP00000114477	TRANSLATION	protein_coding	stop	-	1	151	0	0	0	129.5	6	-3,-1	-	-	-1	MINOR
ENSMUSG00000022940	Pigp	ENSMUST00000113917	ENSMUSP00000109550	TRANSLATION	protein_coding	-	CCDS49918.1	1	139	0	0	0.5	100.7	6	-3,-1	-	-	3.702	MINOR
ENSMUSG00000090515	Krtap27-1	ENSMUST00000165580	ENSMUSP00000129289	TRANSLATION	protein_coding	-	CCDS49892.1	-	202	0	0	1.5	71.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022892	App	ENSMUST00000227753	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022892	App	ENSMUST00000227021	ENSMUSP00000153907	TRANSLATION	protein_coding	-	-	-	733	0	14.34	2.7	734.4	2	4,-1	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000022892	App	ENSMUST00000228375	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022892	App	ENSMUST00000005406	ENSMUSP00000005406	TRANSLATION	protein_coding	-	CCDS28285.1	1	695	0	13.84	2.7	664.6	2	4,-1	-	-	5.814	MINOR
ENSMUSG00000022892	App	ENSMUST00000227723	ENSMUSP00000154061	TRANSLATION	protein_coding	-	-	-	770	0	14.84	2.7	734.4	2	4,-1	-	-	12	PRINCIPAL:5
ENSMUSG00000022892	App	ENSMUST00000226232	ENSMUSP00000154389	TRANSLATION	protein_coding	-	-	-	751	0	14.84	2.7	734.4	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000022892	App	ENSMUST00000226801	ENSMUSP00000154097	TRANSLATION	protein_coding	-	-	-	752	0	14.34	2.7	734.4	2	4,-1	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000022892	App	ENSMUST00000228509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022892	App	ENSMUST00000227654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022892	App	ENSMUST00000227737	ENSMUSP00000154401	TRANSLATION	protein_coding	-	-	-	582	0	10.09	0	561	0	4,-1	-	-	0	MINOR
ENSMUSG00000022892	App	ENSMUST00000227990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022540	Rogdi	ENSMUST00000202281	ENSMUSP00000144481	TRANSLATION	protein_coding	-	CCDS79419.1	1	287	0	0	4.7	0	0	-4,-5	-	-	1	PRINCIPAL:2
ENSMUSG00000022540	Rogdi	ENSMUST00000202640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022540	Rogdi	ENSMUST00000201077	ENSMUSP00000144166	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022540	Rogdi	ENSMUST00000201726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022540	Rogdi	ENSMUST00000201118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022540	Rogdi	ENSMUST00000201651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022540	Rogdi	ENSMUST00000023191	ENSMUSP00000023191	TRANSLATION	protein_coding	-	-	1	309	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000022540	Rogdi	ENSMUST00000202998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022540	Rogdi	ENSMUST00000090453	ENSMUSP00000087938	TRANSLATION	protein_coding	-	-	5	213	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000022540	Rogdi	ENSMUST00000202720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045625	Pigz	ENSMUST00000134666	ENSMUSP00000155940	TRANSLATION	protein_coding	-	-	5	58	0	0	0	26.7	0	0,-3	-	-	0	MINOR
ENSMUSG00000045625	Pigz	ENSMUST00000134928	ENSMUSP00000156116	TRANSLATION	protein_coding	-	-	1	74	0	0	0	25.9	0	0,-3	-	-	0	MINOR
ENSMUSG00000045625	Pigz	ENSMUST00000151412	ENSMUSP00000156038	TRANSLATION	protein_coding	-	-	2	64	0	0	0	25.1	0	0,-3	-	-	0	MINOR
ENSMUSG00000045625	Pigz	ENSMUST00000052174	ENSMUSP00000057509	TRANSLATION	protein_coding	-	CCDS28109.1	1	560	0	0	1.5	191.8	0	0,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000003955	Fam162a	ENSMUST00000232390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003955	Fam162a	ENSMUST00000231379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003955	Fam162a	ENSMUST00000231351	ENSMUSP00000156171	TRANSLATION	protein_coding	-	-	-	64	0	0	0	105.5	1	-4,-7	-	-	0	MINOR
ENSMUSG00000003955	Fam162a	ENSMUST00000004057	ENSMUSP00000004057	TRANSLATION	protein_coding	-	CCDS28146.1	1	155	0	0	7.5	233.9	1	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000022884	Eif4a2	ENSMUST00000123413	ENSMUSP00000115649	TRANSLATION	nonsense_mediated_decay	-	-	1	362	16	9.594	2.7	242	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000232287	ENSMUSP00000156170	TRANSLATION	protein_coding	stop	-	-	322	15	8.364	0	179.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000156227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000152129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000135020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000168891	ENSMUSP00000127030	TRANSLATION	protein_coding	-	CCDS49806.1	1	312	3	7.63	0.5	189.4	0	-4,-5	-	-	2.016	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000134816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000187168	ENSMUSP00000140809	TRANSLATION	protein_coding	-	CCDS49805.1	1	362	16	9.594	2.7	242	0	-4,-5	-	-	15.498	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000147117	ENSMUSP00000121745	TRANSLATION	nonsense_mediated_decay	-	-	1	96	12	2.414	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000130775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000077605	ENSMUSP00000090876	TRANSLATION	protein_coding	-	CCDS49805.1	1	362	16	9.594	2.7	242	0	-4,-5	-	-	15.498	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000148085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000130483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000131871	ENSMUSP00000118141	TRANSLATION	nonsense_mediated_decay	-	-	5	97	12	2.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022884	Eif4a2	ENSMUST00000149328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000142031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022884	Eif4a2	ENSMUST00000130113	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000144493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000023599	ENSMUSP00000023599	TRANSLATION	protein_coding	-	CCDS28074.1	1	407	16	10.594	18.2	257	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000022884	Eif4a2	ENSMUST00000140017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000150117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000141392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000125553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022884	Eif4a2	ENSMUST00000125969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000231287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000232303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000231712	ENSMUSP00000155861	TRANSLATION	protein_coding	-	CCDS27993.1	-	521	8	5.85	3.9	172.5	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000022771	Ppil2	ENSMUST00000232510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022771	Ppil2	ENSMUST00000232397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022771	Ppil2	ENSMUST00000231451	ENSMUSP00000156086	TRANSLATION	nonsense_mediated_decay	-	-	-	207	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022771	Ppil2	ENSMUST00000231536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000231898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000164458	ENSMUSP00000131422	TRANSLATION	protein_coding	-	CCDS27993.1	1	521	8	5.85	3.9	172.5	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000022771	Ppil2	ENSMUST00000232481	ENSMUSP00000156114	TRANSLATION	protein_coding	stop	-	-	147	0	1.75	0	51.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022771	Ppil2	ENSMUST00000231587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000232169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022771	Ppil2	ENSMUST00000231245	ENSMUSP00000156016	TRANSLATION	protein_coding	-	-	-	188	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000022771	Ppil2	ENSMUST00000231635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022771	Ppil2	ENSMUST00000023455	ENSMUSP00000023455	TRANSLATION	protein_coding	-	CCDS27993.1	1	521	8	5.85	3.9	172.5	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000050224	Krtap13	ENSMUST00000053149	ENSMUSP00000061716	TRANSLATION	protein_coding	-	CCDS28300.1	-	197	0	0	0.5	111.6	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000079740	Gm11172	ENSMUST00000115822	ENSMUSP00000129014	TRANSLATION	protein_coding	start/stop	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022672	Prkdc	ENSMUST00000182134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022672	Prkdc	ENSMUST00000023352	ENSMUSP00000023352	TRANSLATION	protein_coding	-	CCDS27978.1	1	4128	0	58.79	0.5	1037	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062608	Olfr195	ENSMUST00000075381	ENSMUSP00000073737	TRANSLATION	protein_coding	-	CCDS28247.1	-	308	0	0.2	2.7	179	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000062608	Olfr195	ENSMUST00000216957	ENSMUSP00000150249	TRANSLATION	protein_coding	-	CCDS28247.1	2	308	0	0.2	2.7	179	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056350	Krtap13-1	ENSMUST00000060494	ENSMUSP00000055537	TRANSLATION	protein_coding	-	CCDS28299.1	-	168	0	0	1.5	190.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039473	Ubn1	ENSMUST00000229570	ENSMUSP00000155604	TRANSLATION	protein_coding	start/stop	-	-	231	0	0	0	70.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039473	Ubn1	ENSMUST00000229126	ENSMUSP00000155263	TRANSLATION	protein_coding	-	-	-	1105	0	0	1.5	331.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000039473	Ubn1	ENSMUST00000229355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039473	Ubn1	ENSMUST00000052449	ENSMUSP00000061843	TRANSLATION	protein_coding	-	CCDS27931.1	1	1135	0	0	1.5	331.1	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000039473	Ubn1	ENSMUST00000229060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039473	Ubn1	ENSMUST00000229386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039473	Ubn1	ENSMUST00000230703	ENSMUSP00000155223	TRANSLATION	protein_coding	-	CCDS27931.1	-	1135	0	0	1.5	331.1	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000050520	Cldn8	ENSMUST00000049697	ENSMUSP00000051887	TRANSLATION	protein_coding	-	CCDS28296.1	-	225	0	0.8	8.8	104.7	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000038127	Ccdc50	ENSMUST00000149077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038127	Ccdc50	ENSMUST00000039443	ENSMUSP00000038509	TRANSLATION	protein_coding	-	-	1	264	0	0	0	158.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038127	Ccdc50	ENSMUST00000096127	ENSMUSP00000093841	TRANSLATION	protein_coding	-	CCDS37306.1	1	290	0	0	0.5	158.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038127	Ccdc50	ENSMUST00000239351	ENSMUSP00000159204	TRANSLATION	protein_coding	-	-	-	480	0	0	1.5	158.5	0	-4,-5	-	-	6.172	ALTERNATIVE:2
ENSMUSG00000038127	Ccdc50	ENSMUST00000100026	ENSMUSP00000097604	TRANSLATION	protein_coding	-	CCDS37305.1	1	305	0	0	3.9	158.5	0	-4,-5	-	-	7	PRINCIPAL:4
ENSMUSG00000038127	Ccdc50	ENSMUST00000143823	ENSMUSP00000118633	TRANSLATION	protein_coding	start/stop	-	5	256	0	0	0	136.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000139491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022708	Zbtb20	ENSMUST00000141941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022708	Zbtb20	ENSMUST00000151290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022708	Zbtb20	ENSMUST00000114694	ENSMUSP00000110342	TRANSLATION	protein_coding	-	CCDS28178.1	5	741	20	2.48	1.7	191.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022708	Zbtb20	ENSMUST00000151244	ENSMUSP00000124984	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000146708	ENSMUSP00000125233	TRANSLATION	protein_coding	stop	-	3	75	0	1.3	0	44.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000134537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022708	Zbtb20	ENSMUST00000156367	ENSMUSP00000124126	TRANSLATION	protein_coding	stop	-	3	131	0	1	0	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000114690	ENSMUSP00000110338	TRANSLATION	protein_coding	-	CCDS49851.1	1	668	20	2.48	2.7	191.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022708	Zbtb20	ENSMUST00000131689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022708	Zbtb20	ENSMUST00000126100	ENSMUSP00000125241	TRANSLATION	protein_coding	stop	-	5	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000156981	ENSMUSP00000124189	TRANSLATION	protein_coding	stop	-	3	138	0	1.88	0	87.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000132881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022708	Zbtb20	ENSMUST00000114695	ENSMUSP00000110343	TRANSLATION	protein_coding	-	CCDS28178.1	1	741	20	2.48	1.7	191.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022708	Zbtb20	ENSMUST00000148775	ENSMUSP00000125016	TRANSLATION	protein_coding	stop	-	3	60	0	1	0	43.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000126354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022708	Zbtb20	ENSMUST00000079441	ENSMUSP00000078410	TRANSLATION	protein_coding	-	CCDS28178.1	5	741	20	2.48	1.7	191.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022708	Zbtb20	ENSMUST00000122875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022708	Zbtb20	ENSMUST00000123047	ENSMUSP00000124798	TRANSLATION	protein_coding	stop	-	3	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022708	Zbtb20	ENSMUST00000114691	ENSMUSP00000110339	TRANSLATION	protein_coding	-	CCDS49851.1	1	668	20	2.48	2.7	191.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022708	Zbtb20	ENSMUST00000162745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049502	Dtx3l	ENSMUST00000081933	ENSMUSP00000080601	TRANSLATION	protein_coding	-	CCDS37325.1	1	748	8	1.75	0.5	33.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000049502	Dtx3l	ENSMUST00000114885	ENSMUSP00000110535	TRANSLATION	protein_coding	-	-	1	691	8	0	0	33.4	0	-4,-7	-	-	12	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000114711	ENSMUSP00000110359	TRANSLATION	protein_coding	-	-	1	73	6	1.8	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000114708	ENSMUSP00000110356	TRANSLATION	protein_coding	-	-	2	73	6	1.8	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000232454	ENSMUSP00000155991	TRANSLATION	protein_coding	-	-	-	73	6	1.8	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000023482	ENSMUSP00000023482	TRANSLATION	protein_coding	-	CCDS28173.1	1	344	24	5.5	1.5	301.5	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000022793	B4galt4	ENSMUST00000114710	ENSMUSP00000110358	TRANSLATION	protein_coding	-	-	3	73	6	1.8	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000231655	ENSMUSP00000156271	TRANSLATION	protein_coding	stop	-	-	226	8	1.2	0	108.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022793	B4galt4	ENSMUST00000161010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022793	B4galt4	ENSMUST00000114712	ENSMUSP00000110360	TRANSLATION	protein_coding	-	CCDS28173.1	1	344	24	5.5	1.5	301.5	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000022793	B4galt4	ENSMUST00000154902	ENSMUSP00000118593	TRANSLATION	nonsense_mediated_decay	-	-	1	246	15	2.95	0	225.4	0	2,-3	-	-	-1	MINOR
ENSMUSG00000035506	Slc12a8	ENSMUST00000122314	ENSMUSP00000113901	TRANSLATION	protein_coding	-	-	5	459	0	0	0	74.1	8	-4,-6	-	-	0.678	MINOR
ENSMUSG00000035506	Slc12a8	ENSMUST00000122427	ENSMUSP00000113164	TRANSLATION	protein_coding	-	-	5	584	0	0	0	140.9	19	-4,-7	-	-	4.686	MINOR
ENSMUSG00000035506	Slc12a8	ENSMUST00000149291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035506	Slc12a8	ENSMUST00000121925	ENSMUSP00000112439	TRANSLATION	protein_coding	-	CCDS49834.1	5	705	0	0	1.5	162.8	22	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035506	Slc12a8	ENSMUST00000059056	ENSMUSP00000062337	TRANSLATION	protein_coding	-	CCDS49834.1	2	705	0	0	1.5	162.8	22	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035506	Slc12a8	ENSMUST00000117134	ENSMUSP00000112925	TRANSLATION	protein_coding	-	-	1	426	0	0	0	74.1	8	-4,-6	-	-	0.678	MINOR
ENSMUSG00000035506	Slc12a8	ENSMUST00000119173	ENSMUSP00000113633	TRANSLATION	protein_coding	-	CCDS37317.1	1	625	0	0	0.5	116.1	20	-4,-5	-	-	3.198	MINOR
ENSMUSG00000091212	Krtap11-1	ENSMUST00000171542	ENSMUSP00000129948	TRANSLATION	protein_coding	-	CCDS49903.1	-	183	0	0	1.5	94.9	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000039738	Slx4	ENSMUST00000165830	ENSMUSP00000126047	TRANSLATION	protein_coding	start/stop	-	5	288	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039738	Slx4	ENSMUST00000146569	ENSMUSP00000126423	TRANSLATION	nonsense_mediated_decay	start	-	1	105	0	2	0	45.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039738	Slx4	ENSMUST00000171658	ENSMUSP00000129144	TRANSLATION	protein_coding	stop	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039738	Slx4	ENSMUST00000040790	ENSMUSP00000038871	TRANSLATION	protein_coding	-	CCDS37240.1	1	1565	7	2	0.5	104.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000039738	Slx4	ENSMUST00000156542	ENSMUSP00000130007	TRANSLATION	nonsense_mediated_decay	start	-	1	80	5	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039738	Slx4	ENSMUST00000145706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039738	Slx4	ENSMUST00000128980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039738	Slx4	ENSMUST00000171762	ENSMUSP00000131380	TRANSLATION	protein_coding	stop	-	5	101	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046546	Fam43a	ENSMUST00000059078	ENSMUSP00000056555	TRANSLATION	protein_coding	-	CCDS28103.1	-	424	0	0	0.5	254	0	-3,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000022856	Tmem41a	ENSMUST00000232635	ENSMUSP00000156055	TRANSLATION	nonsense_mediated_decay	-	-	-	59	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000022856	Tmem41a	ENSMUST00000023562	ENSMUSP00000023562	TRANSLATION	protein_coding	-	CCDS28064.1	1	264	0	0	5.1	69.8	0	1,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000046516	Cox17	ENSMUST00000050273	ENSMUSP00000054086	TRANSLATION	protein_coding	-	CCDS28165.1	1	63	6	1.75	6.3	77.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000046516	Cox17	ENSMUST00000152868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046516	Cox17	ENSMUST00000144812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046516	Cox17	ENSMUST00000156026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046516	Cox17	ENSMUST00000120495	ENSMUSP00000113430	TRANSLATION	protein_coding	-	CCDS28165.1	1	63	6	1.75	6.3	77.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000046516	Cox17	ENSMUST00000134709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052013	Btla	ENSMUST00000231703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052013	Btla	ENSMUST00000063654	ENSMUSP00000067877	TRANSLATION	protein_coding	-	CCDS28195.1	1	306	0	2.1	0.5	0	1	-2,-4	-	-	6	PRINCIPAL:4
ENSMUSG00000052013	Btla	ENSMUST00000102802	ENSMUSP00000099866	TRANSLATION	protein_coding	-	CCDS28196.1	1	305	0	2.1	0.5	0	1	-2,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000110291	Gm37419	ENSMUST00000210705	ENSMUSP00000147569	TRANSLATION	protein_coding	-	-	-	37	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000041205	Map6d1	ENSMUST00000040880	ENSMUSP00000043332	TRANSLATION	protein_coding	-	CCDS37286.1	1	191	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000035629	Rubcn	ENSMUST00000089684	ENSMUSP00000087114	TRANSLATION	protein_coding	-	CCDS49832.1	1	956	13	0	0.5	269.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035629	Rubcn	ENSMUST00000119810	ENSMUSP00000113087	TRANSLATION	protein_coding	-	-	5	880	13	0	0	264.3	0	-4,-5	-	-	11.682	ALTERNATIVE:2
ENSMUSG00000035629	Rubcn	ENSMUST00000040986	ENSMUSP00000048811	TRANSLATION	protein_coding	-	CCDS28124.1	1	941	13	0	0.5	269.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035629	Rubcn	ENSMUST00000115105	ENSMUSP00000110757	TRANSLATION	protein_coding	-	-	5	927	13	0	0	269.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035629	Rubcn	ENSMUST00000152920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035629	Rubcn	ENSMUST00000149621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035629	Rubcn	ENSMUST00000140229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035629	Rubcn	ENSMUST00000153556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035629	Rubcn	ENSMUST00000135480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005958	Ephb3	ENSMUST00000231316	ENSMUSP00000155955	TRANSLATION	protein_coding	stop	-	-	79	0	1.5	0	100.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005958	Ephb3	ENSMUST00000160053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005958	Ephb3	ENSMUST00000161063	ENSMUSP00000124375	TRANSLATION	protein_coding	-	-	1	739	19	10.125	0	604.7	2	-4,-5	-	-	6	MINOR
ENSMUSG00000005958	Ephb3	ENSMUST00000159575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005958	Ephb3	ENSMUST00000232407	ENSMUSP00000155937	TRANSLATION	protein_coding	stop	-	-	191	0	2.5	0	241.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005958	Ephb3	ENSMUST00000006112	ENSMUSP00000006112	TRANSLATION	protein_coding	-	CCDS28060.1	1	993	19	14.025	1.5	845.6	2	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022844	Pdia5	ENSMUST00000023550	ENSMUSP00000023550	TRANSLATION	protein_coding	-	CCDS37323.1	1	517	10	11.16	5.1	233.8	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000022844	Pdia5	ENSMUST00000231595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022844	Pdia5	ENSMUST00000231779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022844	Pdia5	ENSMUST00000231406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044227	Gm9789	ENSMUST00000062524	ENSMUSP00000055898	TRANSLATION	protein_coding	-	-	-	52	0	0	0.5	33.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059632	Krtap8-1	ENSMUST00000072280	ENSMUSP00000072129	TRANSLATION	protein_coding	-	CCDS49901.1	-	61	0	0	2.8	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094030	Gm21833	ENSMUST00000177665	ENSMUSP00000137335	TRANSLATION	protein_coding	start/stop	-	-	500	9	0.6	0	49.6	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000048399	Tprg	ENSMUST00000056087	ENSMUSP00000052585	TRANSLATION	protein_coding	-	CCDS28084.1	1	279	0	0	1.5	100.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048399	Tprg	ENSMUST00000128595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022751	Nit2	ENSMUST00000023432	ENSMUSP00000023432	TRANSLATION	protein_coding	-	CCDS37363.1	1	276	12	7.75	9.3	219.7	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000022751	Nit2	ENSMUST00000231934	ENSMUSP00000156191	TRANSLATION	nonsense_mediated_decay	-	-	-	69	1	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022751	Nit2	ENSMUST00000231855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022751	Nit2	ENSMUST00000231733	ENSMUSP00000155971	TRANSLATION	protein_coding	-	-	-	196	11	5.75	0	155.9	0	-4,-5	-	-	9.504	MINOR
ENSMUSG00000022751	Nit2	ENSMUST00000231423	ENSMUSP00000156334	TRANSLATION	nonsense_mediated_decay	start	-	-	148	11	4.5	0	130	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022751	Nit2	ENSMUST00000232573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022751	Nit2	ENSMUST00000232662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046598	Bdh1	ENSMUST00000128286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046598	Bdh1	ENSMUST00000126825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046598	Bdh1	ENSMUST00000115226	ENSMUSP00000110881	TRANSLATION	protein_coding	-	CCDS28106.1	1	343	27	3.32	2.7	142.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000046598	Bdh1	ENSMUST00000089759	ENSMUSP00000087192	TRANSLATION	protein_coding	-	CCDS28106.1	1	343	27	3.32	2.7	142.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000046598	Bdh1	ENSMUST00000149039	ENSMUSP00000119164	TRANSLATION	protein_coding	stop	-	3	265	21	3.08	0	127.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046598	Bdh1	ENSMUST00000232433	ENSMUSP00000156095	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000046598	Bdh1	ENSMUST00000115227	ENSMUSP00000110882	TRANSLATION	protein_coding	-	CCDS28106.1	1	343	27	3.32	2.7	142.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000022661	Cd200	ENSMUST00000167355	ENSMUSP00000132506	TRANSLATION	nonsense_mediated_decay	-	-	5	129	0	1.396	0	66	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022661	Cd200	ENSMUST00000167552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022661	Cd200	ENSMUST00000172297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022661	Cd200	ENSMUST00000172091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022661	Cd200	ENSMUST00000171328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022661	Cd200	ENSMUST00000166630	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022661	Cd200	ENSMUST00000166512	ENSMUSP00000129541	TRANSLATION	nonsense_mediated_decay	-	-	1	150	0	1.396	0	66	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022661	Cd200	ENSMUST00000023341	ENSMUSP00000023341	TRANSLATION	protein_coding	-	-	5	269	0	2.462	2.4	102.2	1	0,-3	-	-	12.483	ALTERNATIVE:2
ENSMUSG00000022661	Cd200	ENSMUST00000171855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022661	Cd200	ENSMUST00000163230	ENSMUSP00000130518	TRANSLATION	protein_coding	-	CCDS49860.1	1	278	0	2.462	3.9	102.2	1	0,-3	-	-	13	PRINCIPAL:2
ENSMUSG00000022661	Cd200	ENSMUST00000165910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022816	Fstl1	ENSMUST00000127495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022816	Fstl1	ENSMUST00000123077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022816	Fstl1	ENSMUST00000152579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022816	Fstl1	ENSMUST00000125279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022816	Fstl1	ENSMUST00000114763	ENSMUSP00000110411	TRANSLATION	protein_coding	-	CCDS37339.1	1	306	8	1.666	3.9	79.2	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000022816	Fstl1	ENSMUST00000135668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000176982	ENSMUSP00000135347	TRANSLATION	nonsense_mediated_decay	-	-	2	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000175836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000100211	ENSMUSP00000097784	TRANSLATION	protein_coding	-	-	5	1145	0	0	0.5	146.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000180939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000176394	ENSMUSP00000135119	TRANSLATION	nonsense_mediated_decay	-	-	2	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000175762	ENSMUSP00000137827	TRANSLATION	nonsense_mediated_decay	start	-	5	125	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000177042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022518	4930562C15Rik	ENSMUST00000171105	ENSMUSP00000127814	TRANSLATION	protein_coding	-	-	2	306	0	0	0	62.6	0	-4,-7	-	-	0.966	MINOR
ENSMUSG00000022738	Gsc2	ENSMUST00000012279	ENSMUSP00000012279	TRANSLATION	protein_coding	-	-	1	201	0	1.6	0	74.6	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022738	Gsc2	ENSMUST00000232493	ENSMUSP00000155932	TRANSLATION	protein_coding	-	CCDS49786.1	-	214	0	1.6	1.5	74.6	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000046160	Olig1	ENSMUST00000056882	ENSMUSP00000061408	TRANSLATION	protein_coding	-	CCDS28324.1	-	260	0	0.2	1.5	46.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022818	Cyp2ab1	ENSMUST00000182736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022818	Cyp2ab1	ENSMUST00000182669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022818	Cyp2ab1	ENSMUST00000023513	ENSMUSP00000023513	TRANSLATION	protein_coding	-	CCDS49791.1	5	280	25	4.64	1.5	267.6	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000022818	Cyp2ab1	ENSMUST00000182741	ENSMUSP00000138133	TRANSLATION	protein_coding	-	-	5	498	31	8.04	0	400.1	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000022818	Cyp2ab1	ENSMUST00000182508	ENSMUSP00000156220	TRANSLATION	protein_coding	-	CCDS49791.1	5	280	25	4.64	1.5	267.6	0	-4,-2	-	-	1.998	MINOR
ENSMUSG00000062245	Olfr170	ENSMUST00000218837	ENSMUSP00000151806	TRANSLATION	protein_coding	-	CCDS28038.1	-	313	0	0.42	5.1	147.7	8	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000062245	Olfr170	ENSMUST00000206562	ENSMUSP00000145775	TRANSLATION	protein_coding	-	-	5	312	0	0.42	3.9	147.7	8	-4,-6	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000062245	Olfr170	ENSMUST00000078603	ENSMUSP00000077674	TRANSLATION	protein_coding	-	-	-	312	0	0.42	3.9	147.7	8	-4,-6	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000043301	Kcnj6	ENSMUST00000165538	ENSMUSP00000130321	TRANSLATION	protein_coding	-	CCDS49921.1	1	302	0	1	0.5	395.3	2	-4,-5	-	-	4.068	MINOR
ENSMUSG00000043301	Kcnj6	ENSMUST00000099508	ENSMUSP00000097108	TRANSLATION	protein_coding	-	CCDS37409.1	1	425	0	2	9.6	477.5	2	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043301	Kcnj6	ENSMUST00000232403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043301	Kcnj6	ENSMUST00000232128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043301	Kcnj6	ENSMUST00000095873	ENSMUSP00000093558	TRANSLATION	protein_coding	-	CCDS37408.1	1	414	0	2	0.5	477.5	2	-4,-5	-	-	12	MINOR
ENSMUSG00000043301	Kcnj6	ENSMUST00000232562	ENSMUSP00000156014	TRANSLATION	protein_coding	-	-	-	407	0	2	3.5	477.5	2	-4,-5	-	-	12.873	MINOR
ENSMUSG00000043301	Kcnj6	ENSMUST00000231744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049871	Nlrc3	ENSMUST00000163478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049871	Nlrc3	ENSMUST00000229884	ENSMUSP00000155241	TRANSLATION	protein_coding	start	-	-	1199	9	7.17	0	248.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000049871	Nlrc3	ENSMUST00000180200	ENSMUSP00000137325	TRANSLATION	protein_coding	-	CCDS70677.1	1	397	0	9.15	0.5	197.2	0	-4,-7	-	-	3.96	MINOR
ENSMUSG00000049871	Nlrc3	ENSMUST00000177551	ENSMUSP00000137628	TRANSLATION	protein_coding	-	CCDS49747.1	2	1102	9	10.17	0.5	311.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049871	Nlrc3	ENSMUST00000096308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022798	Tex55	ENSMUST00000122078	ENSMUSP00000113120	TRANSLATION	protein_coding	-	CCDS49850.1	1	381	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022798	Tex55	ENSMUST00000130241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022687	Boc	ENSMUST00000114634	ENSMUSP00000110281	TRANSLATION	protein_coding	-	CCDS28186.1	1	1110	0	8.64	1.5	376.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022875	Kng1	ENSMUST00000023589	ENSMUSP00000023589	TRANSLATION	protein_coding	-	CCDS49804.1	1	661	0	1.88	0.5	226.8	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000022875	Kng1	ENSMUST00000089902	ENSMUSP00000087346	TRANSLATION	protein_coding	-	CCDS49803.1	1	480	0	1.88	0.5	226.8	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000022875	Kng1	ENSMUST00000039492	ENSMUSP00000040485	TRANSLATION	protein_coding	-	CCDS28073.1	1	432	0	1.88	0.5	226.8	0	3,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000022875	Kng1	ENSMUST00000125790	ENSMUSP00000121701	TRANSLATION	protein_coding	stop	-	5	133	0	0	0	69.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051065	Mb21d2	ENSMUST00000232571	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051065	Mb21d2	ENSMUST00000100023	ENSMUSP00000097600	TRANSLATION	protein_coding	-	CCDS28093.1	1	491	0	0.2	10.5	114	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000022974	Paxbp1	ENSMUST00000128922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022974	Paxbp1	ENSMUST00000150397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022974	Paxbp1	ENSMUST00000023698	ENSMUSP00000023698	TRANSLATION	nonsense_mediated_decay	start	-	1	450	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022974	Paxbp1	ENSMUST00000118522	ENSMUSP00000113835	TRANSLATION	protein_coding	-	CCDS49908.1	1	919	0	0	3.9	119.8	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000022974	Paxbp1	ENSMUST00000146281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022974	Paxbp1	ENSMUST00000124653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022974	Paxbp1	ENSMUST00000145136	ENSMUSP00000117142	TRANSLATION	nonsense_mediated_decay	start	-	5	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022974	Paxbp1	ENSMUST00000127002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059920	4930453N24Rik	ENSMUST00000162732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059920	4930453N24Rik	ENSMUST00000076991	ENSMUSP00000076255	TRANSLATION	protein_coding	-	CCDS28265.1	1	348	0	0	1.5	359.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079597	Cstdc4	ENSMUST00000231731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079597	Cstdc4	ENSMUST00000114858	ENSMUSP00000110508	TRANSLATION	protein_coding	-	CCDS37328.1	1	97	0	2.75	7.1	82.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000022811	Zfp148	ENSMUST00000232023	ENSMUSP00000156030	TRANSLATION	protein_coding	-	-	-	752	15	2.55	3.7	57.8	0	-4,-5	-	-	18.828	MINOR
ENSMUSG00000022811	Zfp148	ENSMUST00000231732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022811	Zfp148	ENSMUST00000231894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022811	Zfp148	ENSMUST00000165418	ENSMUSP00000126338	TRANSLATION	protein_coding	-	CCDS28130.1	1	794	15	2.55	10.8	57.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022811	Zfp148	ENSMUST00000089677	ENSMUSP00000087106	TRANSLATION	protein_coding	-	CCDS28130.1	1	794	15	2.55	10.8	57.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000045983	Eif4g1	ENSMUST00000044783	ENSMUSP00000047678	TRANSLATION	protein_coding	-	CCDS28055.1	1	1600	0	15.01	0.5	393.5	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000045983	Eif4g1	ENSMUST00000142344	ENSMUSP00000116029	TRANSLATION	protein_coding	stop	-	1	958	0	4.93	0	193.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000231477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045983	Eif4g1	ENSMUST00000115457	ENSMUSP00000111117	TRANSLATION	protein_coding	-	-	5	1553	0	15.01	0.5	393.5	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000045983	Eif4g1	ENSMUST00000136713	ENSMUSP00000143999	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000154594	ENSMUSP00000144233	TRANSLATION	protein_coding	stop	-	2	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000073840	ENSMUSP00000073506	TRANSLATION	protein_coding	-	-	5	1593	0	15.01	0.5	393.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000045983	Eif4g1	ENSMUST00000156226	ENSMUSP00000119215	TRANSLATION	nonsense_mediated_decay	-	-	5	79	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000150333	ENSMUSP00000144107	TRANSLATION	protein_coding	stop	-	5	900	0	4.93	0	197.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000132320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045983	Eif4g1	ENSMUST00000115461	ENSMUSP00000111121	TRANSLATION	protein_coding	-	-	5	1594	0	15.01	0.5	393.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000045983	Eif4g1	ENSMUST00000231598	ENSMUSP00000156364	TRANSLATION	nonsense_mediated_decay	start	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000129958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045983	Eif4g1	ENSMUST00000151679	ENSMUSP00000120698	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000154950	ENSMUSP00000115230	TRANSLATION	protein_coding	stop	-	5	186	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000115460	ENSMUSP00000111120	TRANSLATION	protein_coding	-	CCDS28055.1	5	1600	0	15.01	0.5	393.5	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000045983	Eif4g1	ENSMUST00000137690	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045983	Eif4g1	ENSMUST00000231618	ENSMUSP00000156280	TRANSLATION	protein_coding	stop	-	-	188	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000143939	ENSMUSP00000144320	TRANSLATION	protein_coding	-	-	5	1303	0	15.01	0.5	393.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000045983	Eif4g1	ENSMUST00000128594	ENSMUSP00000144594	TRANSLATION	protein_coding	stop	-	5	795	0	4.93	0	197.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000140576	ENSMUSP00000117587	TRANSLATION	protein_coding	stop	-	5	209	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000136106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045983	Eif4g1	ENSMUST00000115463	ENSMUSP00000111123	TRANSLATION	protein_coding	-	CCDS84213.1	1	1586	0	15.01	0.5	393.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000045983	Eif4g1	ENSMUST00000141034	ENSMUSP00000120035	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045983	Eif4g1	ENSMUST00000128840	ENSMUSP00000143861	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009097	Tbx1	ENSMUST00000232143	ENSMUSP00000155894	TRANSLATION	nonsense_mediated_decay	-	-	-	141	0	0.6	0	26.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000009097	Tbx1	ENSMUST00000232335	ENSMUSP00000156061	TRANSLATION	protein_coding	-	CCDS28023.1	-	488	0	4.43	0.5	268.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000009097	Tbx1	ENSMUST00000232589	ENSMUSP00000156125	TRANSLATION	protein_coding	stop	-	-	123	0	0.6	0	25.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009097	Tbx1	ENSMUST00000232557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009097	Tbx1	ENSMUST00000009241	ENSMUSP00000009241	TRANSLATION	protein_coding	-	-	1	479	0	4.43	0.5	268.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022545	Ercc4	ENSMUST00000156393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022545	Ercc4	ENSMUST00000129049	ENSMUSP00000114639	TRANSLATION	nonsense_mediated_decay	start	-	1	519	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022545	Ercc4	ENSMUST00000138527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022545	Ercc4	ENSMUST00000023206	ENSMUSP00000023206	TRANSLATION	protein_coding	-	CCDS37256.1	1	917	3	0.6	2.9	76.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022545	Ercc4	ENSMUST00000141024	ENSMUSP00000118553	TRANSLATION	nonsense_mediated_decay	-	-	1	393	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022876	Samsn1	ENSMUST00000228147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022876	Samsn1	ENSMUST00000150248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022876	Samsn1	ENSMUST00000114240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022876	Samsn1	ENSMUST00000114239	ENSMUSP00000109877	TRANSLATION	protein_coding	-	CCDS37378.1	1	372	0	3	3.9	244.4	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000022876	Samsn1	ENSMUST00000227215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022876	Samsn1	ENSMUST00000139691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022876	Samsn1	ENSMUST00000226794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022894	Adamts5	ENSMUST00000023611	ENSMUSP00000023611	TRANSLATION	protein_coding	-	CCDS28288.1	1	930	17	5.8	1.5	298.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022517	Mgrn1	ENSMUST00000230220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022517	Mgrn1	ENSMUST00000023159	ENSMUSP00000023159	TRANSLATION	protein_coding	-	-	1	556	8	0.64	2.8	52.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022517	Mgrn1	ENSMUST00000230653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022517	Mgrn1	ENSMUST00000229038	ENSMUSP00000155034	TRANSLATION	protein_coding	-	CCDS57016.1	-	533	8	0.64	1.5	52.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022517	Mgrn1	ENSMUST00000070658	ENSMUSP00000068314	TRANSLATION	protein_coding	-	CCDS49751.1	1	532	8	0.64	2.8	52.3	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022517	Mgrn1	ENSMUST00000230990	ENSMUSP00000155425	TRANSLATION	protein_coding	-	-	-	554	8	0.64	2.8	52.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022517	Mgrn1	ENSMUST00000230738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022517	Mgrn1	ENSMUST00000230108	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022701	Ccdc191	ENSMUST00000145999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022701	Ccdc191	ENSMUST00000178400	ENSMUSP00000137597	TRANSLATION	protein_coding	-	CCDS57030.1	5	883	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000022701	Ccdc191	ENSMUST00000122014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022701	Ccdc191	ENSMUST00000132859	ENSMUSP00000116078	TRANSLATION	protein_coding	-	-	5	825	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000022701	Ccdc191	ENSMUST00000151183	ENSMUSP00000119428	TRANSLATION	protein_coding	stop	-	2	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022701	Ccdc191	ENSMUST00000122440	ENSMUSP00000113814	TRANSLATION	protein_coding	start	-	5	469	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000018830	Myh11	ENSMUST00000230643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018830	Myh11	ENSMUST00000231567	ENSMUSP00000156021	TRANSLATION	protein_coding	-	-	-	1979	14	34.6	11.6	2752.2	0	-4,-5	-	-	20.946	PRINCIPAL:1
ENSMUSG00000018830	Myh11	ENSMUST00000090287	ENSMUSP00000087756	TRANSLATION	protein_coding	-	-	1	1972	14	34.27	6.4	2753.1	0	-4,-5	-	-	18.867	MINOR
ENSMUSG00000018830	Myh11	ENSMUST00000230397	ENSMUSP00000155052	TRANSLATION	protein_coding	-	CCDS27972.1	-	1938	14	34.07	5.1	2753.1	0	-4,-5	-	-	18.099	MINOR
ENSMUSG00000022536	Glyr1	ENSMUST00000229928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022536	Glyr1	ENSMUST00000115844	ENSMUSP00000111510	TRANSLATION	protein_coding	-	CCDS37244.1	1	552	24	12.36	7.1	200.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022536	Glyr1	ENSMUST00000231132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022536	Glyr1	ENSMUST00000231063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022536	Glyr1	ENSMUST00000023189	ENSMUSP00000023189	TRANSLATION	protein_coding	-	CCDS27930.1	1	546	24	12.03	2.9	182.9	0	-4,-7	-	-	17.217	MINOR
ENSMUSG00000060480	Olfr171	ENSMUST00000079891	ENSMUSP00000078814	TRANSLATION	protein_coding	-	CCDS28039.1	-	314	0	0.42	5.1	146.9	7	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000060480	Olfr171	ENSMUST00000205467	ENSMUSP00000145692	TRANSLATION	protein_coding	-	-	2	313	0	0.42	5.1	146.9	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000094472	Gm21897	ENSMUST00000178312	ENSMUSP00000135960	TRANSLATION	protein_coding	start/stop	-	-	500	9	0.6	0	45.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022677	Fopnl	ENSMUST00000230495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022677	Fopnl	ENSMUST00000148278	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022677	Fopnl	ENSMUST00000120707	ENSMUSP00000113348	TRANSLATION	protein_coding	-	-	5	139	0	0	1	55.7	0	-4,-5	-	-	5.274	ALTERNATIVE:2
ENSMUSG00000022677	Fopnl	ENSMUST00000126427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022677	Fopnl	ENSMUST00000023357	ENSMUSP00000023357	TRANSLATION	protein_coding	-	CCDS27973.1	1	174	0	0	2.7	63.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022637	Cblb	ENSMUST00000227062	ENSMUSP00000154583	TRANSLATION	protein_coding	-	CCDS37355.1	-	938	14	9.85	1.5	511.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000022637	Cblb	ENSMUST00000227756	ENSMUSP00000153753	TRANSLATION	protein_coding	-	-	-	830	14	7.55	0.5	328	0	-4,-5	-	-	7.398	MINOR
ENSMUSG00000022637	Cblb	ENSMUST00000114471	ENSMUSP00000110115	TRANSLATION	protein_coding	-	CCDS37355.1	1	938	14	9.85	1.5	511.5	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000022637	Cblb	ENSMUST00000226253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022637	Cblb	ENSMUST00000226593	ENSMUSP00000154755	TRANSLATION	protein_coding	-	-	-	982	14	9.85	1.5	511.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022637	Cblb	ENSMUST00000228247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022637	Cblb	ENSMUST00000227879	ENSMUSP00000153787	TRANSLATION	protein_coding	-	-	-	982	14	9.85	1.5	511.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022702	Hira	ENSMUST00000153397	ENSMUSP00000117944	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022702	Hira	ENSMUST00000004222	ENSMUSP00000004222	TRANSLATION	protein_coding	-	CCDS28031.1	1	1015	0	7.6492	5.1	325.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022702	Hira	ENSMUST00000144609	ENSMUSP00000155948	TRANSLATION	nonsense_mediated_decay	-	-	2	88	0	1.6092	0	15	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022702	Hira	ENSMUST00000232419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022702	Hira	ENSMUST00000150799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022702	Hira	ENSMUST00000128321	ENSMUSP00000156256	TRANSLATION	nonsense_mediated_decay	-	-	5	42	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022702	Hira	ENSMUST00000131444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022702	Hira	ENSMUST00000140748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022702	Hira	ENSMUST00000120532	ENSMUSP00000112614	TRANSLATION	protein_coding	-	-	1	453	0	6.5192	0	118.8	0	-4,-5	-	-	3.738	MINOR
ENSMUSG00000034422	Parp14	ENSMUST00000142946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034422	Parp14	ENSMUST00000042665	ENSMUSP00000037657	TRANSLATION	protein_coding	-	CCDS28143.1	1	1817	23	10.75	0	298.5	0	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000034422	Parp14	ENSMUST00000135669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045331	2310079G19Rik	ENSMUST00000052337	ENSMUSP00000058969	TRANSLATION	protein_coding	-	CCDS49891.1	-	185	0	0	1.5	172.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000004462	Tbccd1	ENSMUST00000232555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004462	Tbccd1	ENSMUST00000232075	ENSMUSP00000156210	TRANSLATION	protein_coding	-	CCDS49798.1	-	552	0	0.6	0.5	128.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004462	Tbccd1	ENSMUST00000232345	ENSMUSP00000156050	TRANSLATION	nonsense_mediated_decay	-	-	-	294	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004462	Tbccd1	ENSMUST00000004576	ENSMUSP00000004576	TRANSLATION	protein_coding	-	CCDS49798.1	1	552	0	0.6	0.5	128.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004462	Tbccd1	ENSMUST00000231267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004462	Tbccd1	ENSMUST00000232251	ENSMUSP00000155954	TRANSLATION	protein_coding	stop	-	-	212	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004462	Tbccd1	ENSMUST00000232681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004462	Tbccd1	ENSMUST00000231513	ENSMUSP00000156008	TRANSLATION	protein_coding	stop	-	-	112	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004462	Tbccd1	ENSMUST00000231229	ENSMUSP00000156310	TRANSLATION	nonsense_mediated_decay	start	-	-	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004462	Tbccd1	ENSMUST00000232009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022773	Ypel1	ENSMUST00000035682	ENSMUSP00000039760	TRANSLATION	protein_coding	-	CCDS37268.1	1	118	4	0	19.5	48.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000022773	Ypel1	ENSMUST00000239090	ENSMUSP00000158907	TRANSLATION	protein_coding	-	-	-	152	4	0	0	48.6	0	-4,-1	-	-	10	MINOR
ENSMUSG00000022773	Ypel1	ENSMUST00000232258	ENSMUSP00000156183	TRANSLATION	protein_coding	stop	-	-	62	2	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022773	Ypel1	ENSMUST00000232574	ENSMUSP00000156213	TRANSLATION	protein_coding	-	-	-	130	4	0	0.5	30.9	0	-4,-2	-	-	7.816	MINOR
ENSMUSG00000022773	Ypel1	ENSMUST00000231394	ENSMUSP00000156275	TRANSLATION	nonsense_mediated_decay	-	-	-	118	4	0	19.5	48.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022773	Ypel1	ENSMUST00000232168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022773	Ypel1	ENSMUST00000231518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022773	Ypel1	ENSMUST00000231514	ENSMUSP00000156145	TRANSLATION	protein_coding	stop	-	-	90	4	0	0	29.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034473	Sec22a	ENSMUST00000043521	ENSMUSP00000039568	TRANSLATION	protein_coding	-	CCDS28138.1	1	307	0	2.12	7.6	71.3	3	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034473	Sec22a	ENSMUST00000154064	ENSMUSP00000155996	TRANSLATION	nonsense_mediated_decay	-	-	3	181	0	2.12	0	71.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034473	Sec22a	ENSMUST00000141087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034473	Sec22a	ENSMUST00000154216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034473	Sec22a	ENSMUST00000232420	ENSMUSP00000156164	TRANSLATION	protein_coding	-	-	-	285	0	2.12	1.7	71.3	2	-4,-7	-	-	12.318	MINOR
ENSMUSG00000034473	Sec22a	ENSMUST00000138355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005980	Dnase1	ENSMUST00000120009	ENSMUSP00000113119	TRANSLATION	protein_coding	-	CCDS27913.1	1	284	12	8.24	1.5	31.6	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000005980	Dnase1	ENSMUST00000149670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005980	Dnase1	ENSMUST00000006136	ENSMUSP00000006136	TRANSLATION	protein_coding	-	CCDS27913.1	1	284	12	8.24	1.5	31.6	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000005980	Dnase1	ENSMUST00000176642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005980	Dnase1	ENSMUST00000157044	ENSMUSP00000120642	TRANSLATION	protein_coding	stop	-	2	71	2	1.75	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000005980	Dnase1	ENSMUST00000137748	ENSMUSP00000119934	TRANSLATION	protein_coding	stop	-	2	225	10	6.41	0	26.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000005980	Dnase1	ENSMUST00000144792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005980	Dnase1	ENSMUST00000177337	ENSMUSP00000135442	TRANSLATION	nonsense_mediated_decay	-	-	5	203	8	4.33	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000005980	Dnase1	ENSMUST00000175755	ENSMUSP00000135060	TRANSLATION	protein_coding	start	-	2	63	2	1.66	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005980	Dnase1	ENSMUST00000125961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005980	Dnase1	ENSMUST00000132466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022542	Septin12	ENSMUST00000230878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022542	Septin12	ENSMUST00000229321	ENSMUSP00000155459	TRANSLATION	protein_coding	-	-	-	278	20	6.55	0.5	279.9	0	-4,-2	-	-	10.992	MINOR
ENSMUSG00000022542	Septin12	ENSMUST00000170323	ENSMUSP00000131062	TRANSLATION	protein_coding	-	CCDS27929.1	1	317	20	6.55	0.5	279.9	0	-4,-2	-	-	10.992	MINOR
ENSMUSG00000022542	Septin12	ENSMUST00000230362	ENSMUSP00000154901	TRANSLATION	protein_coding	-	-	-	357	20	7.98	1.5	349	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000002845	Tmem39a	ENSMUST00000171064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002845	Tmem39a	ENSMUST00000163549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002845	Tmem39a	ENSMUST00000169554	ENSMUSP00000127143	TRANSLATION	protein_coding	start	-	5	192	0	0	0	223.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000002845	Tmem39a	ENSMUST00000170097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002845	Tmem39a	ENSMUST00000163948	ENSMUSP00000130791	TRANSLATION	protein_coding	stop	-	5	164	0	0	0	128.7	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000002845	Tmem39a	ENSMUST00000165140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002845	Tmem39a	ENSMUST00000163133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002845	Tmem39a	ENSMUST00000166235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002845	Tmem39a	ENSMUST00000171687	ENSMUSP00000126218	TRANSLATION	protein_coding	-	CCDS57029.1	1	418	0	0	0.5	375	6	-4,-1	-	-	0	MINOR
ENSMUSG00000002845	Tmem39a	ENSMUST00000167033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002845	Tmem39a	ENSMUST00000002924	ENSMUSP00000002924	TRANSLATION	protein_coding	-	CCDS28171.1	1	486	0	0	7.8	650.4	7	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000002845	Tmem39a	ENSMUST00000165631	ENSMUSP00000130186	TRANSLATION	protein_coding	start	-	5	145	0	0	0	155.1	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000002845	Tmem39a	ENSMUST00000166854	ENSMUSP00000127040	TRANSLATION	protein_coding	start	-	5	155	0	0	0	139.6	2	2,-3	-	-	-1	MINOR
ENSMUSG00000002845	Tmem39a	ENSMUST00000163884	ENSMUSP00000132515	TRANSLATION	protein_coding	-	CCDS28171.1	1	486	0	0	7.8	650.4	7	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000115293	Gm49333	ENSMUST00000079600	ENSMUSP00000078550	TRANSLATION	protein_coding,RT	-	CCDS49794.1	1	881	7	17.25	0.5	681.3	1	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000115293	Gm49333	ENSMUST00000120394	ENSMUSP00000113475	TRANSLATION	protein_coding,RT	-	CCDS49793.1	1	910	7	17.25	2.7	681.3	1	-4,-6	-	-	-1	PRINCIPAL:4
ENSMUSG00000022863	Btg3	ENSMUST00000148124	ENSMUSP00000119706	TRANSLATION	protein_coding	stop	-	5	137	0	2.78	0	146.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022863	Btg3	ENSMUST00000231353	ENSMUSP00000156138	TRANSLATION	protein_coding	start	-	-	152	0	2.18	0	111.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022863	Btg3	ENSMUST00000023570	ENSMUSP00000023570	TRANSLATION	protein_coding	-	CCDS28277.1	1	252	0	2.78	7.5	146.5	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000096215	Smim22	ENSMUST00000183821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096215	Smim22	ENSMUST00000183381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096215	Smim22	ENSMUST00000184256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096215	Smim22	ENSMUST00000185147	ENSMUSP00000139067	TRANSLATION	protein_coding	-	CCDS70681.1	2	86	0	0	2.7	90	2	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000096215	Smim22	ENSMUST00000178155	ENSMUSP00000137083	TRANSLATION	protein_coding	-	CCDS57017.1	1	91	0	0	1.5	90	2	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000096215	Smim22	ENSMUST00000183477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096215	Smim22	ENSMUST00000184439	ENSMUSP00000139370	TRANSLATION	protein_coding	-	CCDS57017.1	2	91	0	0	1.5	90	2	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000096215	Smim22	ENSMUST00000183631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056706	Krtap7-1	ENSMUST00000056118	ENSMUSP00000054720	TRANSLATION	protein_coding	-	CCDS49902.1	-	87	0	0	5.1	156.1	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000071510	Olfr172	ENSMUST00000214139	ENSMUSP00000150908	TRANSLATION	protein_coding	-	CCDS28235.1	5	309	0	0.24	2.9	173.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071510	Olfr172	ENSMUST00000095991	ENSMUSP00000093690	TRANSLATION	protein_coding	-	CCDS28235.1	-	309	0	0.24	2.9	173.9	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002846	Timmdc1	ENSMUST00000002925	ENSMUSP00000002925	TRANSLATION	protein_coding	-	CCDS28169.1	1	285	0	0	2.7	56	0	-2,1	-	-	6	PRINCIPAL:1
ENSMUSG00000002846	Timmdc1	ENSMUST00000147543	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000026181	Ppm1f	ENSMUST00000027373	ENSMUSP00000027373	TRANSLATION	protein_coding	-	CCDS27991.1	1	452	12	4.26	1.5	235.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000026181	Ppm1f	ENSMUST00000232247	ENSMUSP00000156361	TRANSLATION	protein_coding	stop	-	-	29	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091712	Sec14l5	ENSMUST00000230616	ENSMUSP00000155164	TRANSLATION	protein_coding	-	CCDS49752.1	-	696	0	6.97	1.5	326.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091712	Sec14l5	ENSMUST00000165810	ENSMUSP00000128063	TRANSLATION	protein_coding	-	CCDS49752.1	1	696	0	6.97	1.5	326.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000105906	Iglc1	ENSMUST00000200568	ENSMUSP00000142686	TRANSLATION	IG_C_gene	start	-	-	106	0	1	0	109.1	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000005732	Ranbp1	ENSMUST00000134035	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005732	Ranbp1	ENSMUST00000123073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005732	Ranbp1	ENSMUST00000115645	ENSMUSP00000111309	TRANSLATION	protein_coding	-	CCDS37280.1	1	203	0	4.6	2.7	187.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005732	Ranbp1	ENSMUST00000052325	ENSMUSP00000055288	TRANSLATION	protein_coding	-	-	3	153	0	3.6	1.2	162.5	0	-4,-5	-	-	8.496	MINOR
ENSMUSG00000050704	2310061N02Rik	ENSMUST00000050882	ENSMUSP00000062074	TRANSLATION	protein_coding	-	CCDS49893.1	-	174	0	0	3.9	188.8	0	-4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000022931	Krtap15	ENSMUST00000187823	ENSMUSP00000140888	TRANSLATION	protein_coding	-	CCDS79477.1	-	150	0	0	1.5	55.1	0	-4,-2	-	-	2.508	PRINCIPAL:1
ENSMUSG00000022931	Krtap15	ENSMUST00000023648	ENSMUSP00000023648	TRANSLATION	protein_coding	start/stop	-	5	127	0	0	0	113.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050312	Nsun3	ENSMUST00000143314	ENSMUSP00000114448	TRANSLATION	nonsense_mediated_decay	-	-	1	77	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050312	Nsun3	ENSMUST00000156676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050312	Nsun3	ENSMUST00000231289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050312	Nsun3	ENSMUST00000152553	ENSMUSP00000123643	TRANSLATION	protein_coding	stop	-	3	125	5	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050312	Nsun3	ENSMUST00000152842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050312	Nsun3	ENSMUST00000151583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050312	Nsun3	ENSMUST00000063089	ENSMUSP00000059720	TRANSLATION	protein_coding	-	CCDS37373.1	1	348	17	4.53	0.5	101.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022902	Stfa2	ENSMUST00000023619	ENSMUSP00000023619	TRANSLATION	protein_coding	-	CCDS37334.1	1	103	0	2.75	1.5	80.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000038168	P3h2	ENSMUST00000159161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038168	P3h2	ENSMUST00000161878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038168	P3h2	ENSMUST00000160067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038168	P3h2	ENSMUST00000039990	ENSMUSP00000038056	TRANSLATION	protein_coding	-	CCDS28086.1	1	703	3	0	1.5	41.4	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000022752	Tomm70a	ENSMUST00000231901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022752	Tomm70a	ENSMUST00000166897	ENSMUSP00000129186	TRANSLATION	protein_coding	-	CCDS28227.1	1	611	0	6.46	3.9	84.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000022752	Tomm70a	ENSMUST00000231298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022847	Thpo	ENSMUST00000115437	ENSMUSP00000111097	TRANSLATION	protein_coding	-	CCDS37292.1	1	356	0	3.75	0.5	155	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000022847	Thpo	ENSMUST00000232217	ENSMUSP00000155952	TRANSLATION	protein_coding	-	-	-	385	0	3.75	0	155	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022847	Thpo	ENSMUST00000076422	ENSMUSP00000075756	TRANSLATION	protein_coding	-	CCDS37292.1	1	356	0	3.75	0.5	155	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000022847	Thpo	ENSMUST00000231826	ENSMUSP00000155914	TRANSLATION	protein_coding	stop	-	-	231	0	2.75	0.5	120.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000004366	Sst	ENSMUST00000004480	ENSMUSP00000004480	TRANSLATION	protein_coding	-	CCDS28080.1	1	116	0	0	13.3	45.7	0	4,-1	-	-	10	PRINCIPAL:1
ENSMUSG00000022789	Dnm1l	ENSMUST00000230038	ENSMUSP00000155605	TRANSLATION	protein_coding	-	-	-	221	10	5.3	0	177.8	0	-4,-7	-	-	1.332	MINOR
ENSMUSG00000022789	Dnm1l	ENSMUST00000096229	ENSMUSP00000093945	TRANSLATION	protein_coding	-	CCDS27985.1	1	712	17	12.31	10.6	643.9	0	-4,-7	-	-	19.872	PRINCIPAL:4
ENSMUSG00000022789	Dnm1l	ENSMUST00000023477	ENSMUSP00000023477	TRANSLATION	protein_coding	-	CCDS27984.1	1	699	17	12.56	10.6	645.6	0	-4,-7	-	-	20.472	ALTERNATIVE:1
ENSMUSG00000022789	Dnm1l	ENSMUST00000115749	ENSMUSP00000111415	TRANSLATION	protein_coding	-	-	1	587	9	8.692	1.7	505.7	0	-4,-5	-	-	0.885	MINOR
ENSMUSG00000022789	Dnm1l	ENSMUST00000230980	ENSMUSP00000155155	TRANSLATION	protein_coding	-	CCDS70689.1	-	716	17	12.824	0.5	643.4	0	-4,-7	-	-	17.868	MINOR
ENSMUSG00000022789	Dnm1l	ENSMUST00000230958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022789	Dnm1l	ENSMUST00000230022	ENSMUSP00000155429	TRANSLATION	protein_coding	-	-	-	612	9	10.192	0.5	569.9	0	-4,-5	-	-	2.862	MINOR
ENSMUSG00000090777	Ccdc188	ENSMUST00000231860	ENSMUSP00000156197	TRANSLATION	protein_coding	stop	-	-	415	0	0	1	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090777	Ccdc188	ENSMUST00000167061	ENSMUSP00000132278	TRANSLATION	protein_coding	start/stop	-	5	249	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090777	Ccdc188	ENSMUST00000231965	ENSMUSP00000156029	TRANSLATION	nonsense_mediated_decay	-	-	-	307	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090777	Ccdc188	ENSMUST00000231369	ENSMUSP00000155981	TRANSLATION	protein_coding	-	-	-	436	0	0	0	34.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000068071	Gm6358	ENSMUST00000187643	ENSMUSP00000139779	TRANSLATION	protein_coding	-	-	-	74	0	0	0	30.3	0	-4,-6	-	-	6	PRINCIPAL:5
ENSMUSG00000068071	Gm6358	ENSMUST00000089101	ENSMUSP00000086502	TRANSLATION	protein_coding	-	-	-	51	0	0	0.5	30.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000022824	Muc13	ENSMUST00000023520	ENSMUSP00000023520	TRANSLATION	protein_coding	-	CCDS28134.1	1	573	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000022824	Muc13	ENSMUST00000115044	ENSMUSP00000110696	TRANSLATION	protein_coding	-	CCDS28134.1	1	573	0	0	0.5	0	1	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000036292	Gramd1c	ENSMUST00000036174	ENSMUSP00000036739	TRANSLATION	protein_coding	-	CCDS28181.1	1	457	0	0	5.3	122.2	1	-4,-5	-	-	2.522	MINOR
ENSMUSG00000036292	Gramd1c	ENSMUST00000114677	ENSMUSP00000110325	TRANSLATION	protein_coding	-	CCDS28181.1	1	457	0	0	5.3	122.2	1	-4,-5	-	-	2.522	MINOR
ENSMUSG00000036292	Gramd1c	ENSMUST00000179565	ENSMUSP00000137426	TRANSLATION	protein_coding	-	CCDS28181.1	5	457	0	0	5.3	122.2	1	-4,-5	-	-	2.522	MINOR
ENSMUSG00000036292	Gramd1c	ENSMUST00000214098	ENSMUSP00000150056	TRANSLATION	protein_coding	-	-	5	662	0	1.73	2.7	213.5	1	-4,-5	-	-	12.79	PRINCIPAL:1
ENSMUSG00000036292	Gramd1c	ENSMUST00000214764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036292	Gramd1c	ENSMUST00000216149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032940	Rbm11	ENSMUST00000114253	ENSMUSP00000109891	TRANSLATION	protein_coding	-	CCDS37377.1	1	238	0	2.65	1.5	54.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000032940	Rbm11	ENSMUST00000114249	ENSMUSP00000109887	TRANSLATION	protein_coding	-	-	5	238	0	2.2	1.5	54.5	0	-4,-5	-	-	10.98	ALTERNATIVE:2
ENSMUSG00000032940	Rbm11	ENSMUST00000046378	ENSMUSP00000038956	TRANSLATION	protein_coding	-	CCDS37377.1	5	238	0	2.65	1.5	54.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000050908	Tvp23a	ENSMUST00000141587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050908	Tvp23a	ENSMUST00000153027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050908	Tvp23a	ENSMUST00000128288	ENSMUSP00000116076	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050908	Tvp23a	ENSMUST00000135315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050908	Tvp23a	ENSMUST00000051118	ENSMUSP00000052922	TRANSLATION	protein_coding	-	CCDS27949.1	1	222	0	0	1.5	173.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022913	Psmg1	ENSMUST00000233134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022913	Psmg1	ENSMUST00000233128	ENSMUSP00000156722	TRANSLATION	protein_coding	-	-	-	268	0	0	1.2	202	0	-4,-5	-	-	0.093	MINOR
ENSMUSG00000022913	Psmg1	ENSMUST00000023630	ENSMUSP00000023630	TRANSLATION	protein_coding	-	CCDS28352.1	1	289	0	0	7.5	430	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022913	Psmg1	ENSMUST00000233590	ENSMUSP00000156613	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035258	Abi3bp	ENSMUST00000231832	ENSMUSP00000156155	TRANSLATION	protein_coding	-	-	-	884	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035258	Abi3bp	ENSMUST00000171000	ENSMUSP00000128818	TRANSLATION	protein_coding	-	CCDS37362.1	1	909	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035258	Abi3bp	ENSMUST00000048471	ENSMUSP00000036257	TRANSLATION	protein_coding	-	CCDS37359.1	1	1179	0	2.256	0.5	40.4	0	3,-1	-	-	12	PRINCIPAL:4
ENSMUSG00000035258	Abi3bp	ENSMUST00000096012	ENSMUSP00000093711	TRANSLATION	protein_coding	-	CCDS37361.1	1	1079	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035258	Abi3bp	ENSMUST00000231781	ENSMUSP00000156096	TRANSLATION	protein_coding	-	-	-	1637	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035258	Abi3bp	ENSMUST00000231870	ENSMUSP00000156180	TRANSLATION	protein_coding	-	-	-	1099	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000035258	Abi3bp	ENSMUST00000231337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035258	Abi3bp	ENSMUST00000096013	ENSMUSP00000093712	TRANSLATION	protein_coding	-	CCDS37360.1	1	1115	0	2.256	0.5	40.4	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000068284	Usf3	ENSMUST00000119746	ENSMUSP00000112620	TRANSLATION	protein_coding	-	CCDS28184.1	5	2221	0	1.955	0.5	48.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068284	Usf3	ENSMUST00000169582	ENSMUSP00000128627	TRANSLATION	protein_coding	-	CCDS28184.1	5	2221	0	1.955	0.5	48.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000068284	Usf3	ENSMUST00000088356	ENSMUSP00000085694	TRANSLATION	protein_coding	-	-	5	100	0	1.955	0	48.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068284	Usf3	ENSMUST00000141015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051669	AU021092	ENSMUST00000050160	ENSMUSP00000058860	TRANSLATION	protein_coding	-	CCDS27934.1	1	385	0	0	0.5	327.8	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000047953	Gp5	ENSMUST00000061190	ENSMUSP00000051895	TRANSLATION	protein_coding	-	CCDS28100.1	1	567	0	0.48	1.5	171.8	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000004069	Dnaja3	ENSMUST00000144815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004069	Dnaja3	ENSMUST00000138495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004069	Dnaja3	ENSMUST00000060067	ENSMUSP00000053842	TRANSLATION	protein_coding	-	CCDS27922.1	1	480	8	6.37	7.6	228	0	-4,0	-	-	21	PRINCIPAL:3
ENSMUSG00000004069	Dnaja3	ENSMUST00000115854	ENSMUSP00000111520	TRANSLATION	protein_coding	-	CCDS49748.1	1	453	8	6.37	7.6	228	0	-4,0	-	-	21	ALTERNATIVE:1
ENSMUSG00000004069	Dnaja3	ENSMUST00000229529	ENSMUSP00000155588	TRANSLATION	protein_coding	-	-	-	429	4	5.37	0	174.1	0	-4,0	-	-	9.768	MINOR
ENSMUSG00000094539	Olfr191	ENSMUST00000078517	ENSMUSP00000077604	TRANSLATION	protein_coding	-	CCDS28244.1	-	309	0	0	5.1	159.4	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000094539	Olfr191	ENSMUST00000215647	ENSMUSP00000150473	TRANSLATION	protein_coding	-	CCDS28244.1	2	309	0	0	5.1	159.4	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000022946	Dop1b	ENSMUST00000228261	ENSMUSP00000156073	TRANSLATION	protein_coding	start/stop	-	-	185	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022946	Dop1b	ENSMUST00000226215	ENSMUSP00000154229	TRANSLATION	nonsense_mediated_decay	start	-	-	1288	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000022946	Dop1b	ENSMUST00000227156	ENSMUSP00000154771	TRANSLATION	protein_coding	-	-	-	2178	0	0	0.5	155.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022946	Dop1b	ENSMUST00000228846	ENSMUSP00000154446	TRANSLATION	protein_coding	stop	-	-	106	0	0	0	142	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022946	Dop1b	ENSMUST00000045004	ENSMUSP00000044437	TRANSLATION	protein_coding	-	CCDS28343.1	1	2295	0	0	0.5	334.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022946	Dop1b	ENSMUST00000231882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022946	Dop1b	ENSMUST00000228423	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022946	Dop1b	ENSMUST00000232210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022946	Dop1b	ENSMUST00000226418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022946	Dop1b	ENSMUST00000226535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022946	Dop1b	ENSMUST00000227939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022946	Dop1b	ENSMUST00000227278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022946	Dop1b	ENSMUST00000226836	ENSMUSP00000154636	TRANSLATION	protein_coding	start/stop	-	-	727	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022946	Dop1b	ENSMUST00000226335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048830	2310057N15Rik	ENSMUST00000054223	ENSMUSP00000062370	TRANSLATION	protein_coding	-	CCDS28302.1	-	200	0	0	0.5	163.9	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000022814	Umps	ENSMUST00000131990	ENSMUSP00000119423	TRANSLATION	nonsense_mediated_decay	-	-	1	57	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022814	Umps	ENSMUST00000023510	ENSMUSP00000023510	TRANSLATION	protein_coding	-	CCDS28136.1	1	481	32	6	6.3	261.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022510	Trp63	ENSMUST00000040231	ENSMUSP00000038117	TRANSLATION	protein_coding	-	CCDS28085.1	1	586	4	6.15	8.4	475.2	0	-4,-5	-	-	19	PRINCIPAL:3
ENSMUSG00000022510	Trp63	ENSMUST00000115304	ENSMUSP00000110959	TRANSLATION	protein_coding	-	-	1	284	4	5	0	369.3	0	-4,-5	-	-	7.702	MINOR
ENSMUSG00000022510	Trp63	ENSMUST00000115305	ENSMUSP00000110960	TRANSLATION	protein_coding	-	CCDS49812.1	1	393	4	6.15	3.9	435.7	0	-4,-5	-	-	14.806	MINOR
ENSMUSG00000022510	Trp63	ENSMUST00000115308	ENSMUSP00000110963	TRANSLATION	protein_coding	-	CCDS49808.1	1	483	4	6.15	1.5	435.7	0	-4,-5	-	-	13.834	MINOR
ENSMUSG00000022510	Trp63	ENSMUST00000115306	ENSMUSP00000110961	TRANSLATION	protein_coding	-	CCDS49811.1	1	582	4	6.15	5.7	475.2	0	-4,-5	-	-	17.905	ALTERNATIVE:1
ENSMUSG00000022510	Trp63	ENSMUST00000115307	ENSMUSP00000110962	TRANSLATION	protein_coding	-	-	1	231	0	1	0	31.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022510	Trp63	ENSMUST00000115310	ENSMUSP00000110965	TRANSLATION	protein_coding	-	CCDS49809.1	1	680	4	6.15	6.3	475.2	0	-4,-5	-	-	18.148	ALTERNATIVE:1
ENSMUSG00000022510	Trp63	ENSMUST00000065523	ENSMUSP00000067005	TRANSLATION	protein_coding	-	CCDS49810.1	1	555	4	6.15	5.1	435.7	0	-4,-5	-	-	15.292	MINOR
ENSMUSG00000106039	Iglc4	ENSMUST00000197046	ENSMUSP00000142806	TRANSLATION	IG_C_gene	start	-	-	104	0	1	0	85.3	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000231681	ENSMUSP00000156313	TRANSLATION	protein_coding	-	CCDS37269.1	-	305	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000231630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000093336	ENSMUSP00000091026	TRANSLATION	protein_coding	-	CCDS37269.1	1	305	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000231558	ENSMUSP00000156373	TRANSLATION	protein_coding	stop	-	-	232	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000232615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000232601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000231303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049916	2610318N02Rik	ENSMUST00000231297	ENSMUSP00000156078	TRANSLATION	protein_coding	stop	-	-	207	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048087	Gm4737	ENSMUST00000059524	ENSMUSP00000127198	TRANSLATION	protein_coding	-	CCDS84240.1	-	432	44	1	18.3	528.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000022893	Adamts1	ENSMUST00000023610	ENSMUSP00000023610	TRANSLATION	protein_coding	-	CCDS28287.1	1	968	18	6.88	1.5	361.9	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000022893	Adamts1	ENSMUST00000125897	ENSMUSP00000118471	TRANSLATION	protein_coding	stop	-	1	681	17	6.38	0	269.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022893	Adamts1	ENSMUST00000138474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032932	Hspa13	ENSMUST00000114244	ENSMUSP00000109882	TRANSLATION	protein_coding	-	-	5	260	10	3.064	0.5	218.7	0	1,-3	-	-	5.886	MINOR
ENSMUSG00000032932	Hspa13	ENSMUST00000137806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032932	Hspa13	ENSMUST00000046283	ENSMUSP00000048817	TRANSLATION	protein_coding	-	CCDS28273.1	1	471	20	3.12	6.3	362.6	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000032932	Hspa13	ENSMUST00000232633	ENSMUSP00000156320	TRANSLATION	nonsense_mediated_decay	-	-	-	260	10	3.064	0.5	218.7	0	1,-3	-	-	-1	MINOR
ENSMUSG00000068663	Clec16a	ENSMUST00000122856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068663	Clec16a	ENSMUST00000115827	ENSMUSP00000111493	TRANSLATION	protein_coding	-	-	1	883	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000068663	Clec16a	ENSMUST00000115823	ENSMUSP00000111489	TRANSLATION	protein_coding	-	-	1	522	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000068663	Clec16a	ENSMUST00000066345	ENSMUSP00000065423	TRANSLATION	protein_coding	-	CCDS37253.1	5	1036	0	0	1.5	0	0	-4,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000068663	Clec16a	ENSMUST00000038145	ENSMUSP00000040267	TRANSLATION	protein_coding	-	-	1	912	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000068663	Clec16a	ENSMUST00000155633	ENSMUSP00000123189	TRANSLATION	protein_coding	-	CCDS57018.1	1	1034	0	0	1.5	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000068663	Clec16a	ENSMUST00000115824	ENSMUSP00000111490	TRANSLATION	protein_coding	-	-	5	1036	0	0	1.5	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000068663	Clec16a	ENSMUST00000145866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068663	Clec16a	ENSMUST00000150894	ENSMUSP00000114577	TRANSLATION	protein_coding	stop	-	2	67	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000068663	Clec16a	ENSMUST00000115828	ENSMUSP00000111494	TRANSLATION	nonsense_mediated_decay	-	-	1	667	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000068663	Clec16a	ENSMUST00000130148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079737	3110001I22Rik	ENSMUST00000225585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079737	3110001I22Rik	ENSMUST00000035426	ENSMUSP00000041742	TRANSLATION	protein_coding	-	CCDS37260.1	1	312	0	0	0.5	77.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079737	3110001I22Rik	ENSMUST00000223666	-	NO_TRANSLATION	transcribed_processed_pseudogene
ENSMUSG00000022742	Cpox	ENSMUST00000232532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022742	Cpox	ENSMUST00000231492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022742	Cpox	ENSMUST00000231342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022742	Cpox	ENSMUST00000232176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022742	Cpox	ENSMUST00000060077	ENSMUSP00000055455	TRANSLATION	protein_coding	-	CCDS49878.1	1	443	0	6.55	1.5	464.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022742	Cpox	ENSMUST00000231276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116930	Gm49711	ENSMUST00000232677	ENSMUSP00000156255	TRANSLATION	protein_coding,RT	-	-	-	117	0	1.575	0	31.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000068073	1110025L11Rik	ENSMUST00000089104	ENSMUSP00000086505	TRANSLATION	protein_coding	-	CCDS59624.1	-	78	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000043140	Tmem186	ENSMUST00000052505	ENSMUSP00000053862	TRANSLATION	protein_coding	-	CCDS27940.1	1	216	0	0	5.1	0	0	-4,0	-	-	2	PRINCIPAL:1
ENSMUSG00000039851	4932438H23Rik	ENSMUST00000146047	ENSMUSP00000122640	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	195.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039851	4932438H23Rik	ENSMUST00000035689	ENSMUSP00000040111	TRANSLATION	protein_coding	-	CCDS28322.1	1	230	0	0	0.5	331.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039851	4932438H23Rik	ENSMUST00000114076	ENSMUSP00000109710	TRANSLATION	protein_coding	-	CCDS28322.1	1	230	0	0	0.5	331.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000005718	Tfap4	ENSMUST00000230875	ENSMUSP00000155303	TRANSLATION	protein_coding	stop	-	-	199	0	1.4	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005718	Tfap4	ENSMUST00000229956	ENSMUSP00000155803	TRANSLATION	protein_coding	stop	-	-	214	0	2	0	61.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005718	Tfap4	ENSMUST00000005862	ENSMUSP00000005862	TRANSLATION	protein_coding	-	CCDS27919.1	1	338	0	2	6.3	61.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039903	Eva1c	ENSMUST00000138064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039903	Eva1c	ENSMUST00000152223	ENSMUSP00000119510	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000099543	ENSMUSP00000097141	TRANSLATION	protein_coding	-	CCDS28319.1	1	392	0	2.4	0.5	259.6	3	-4,-2	-	-	5.52	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000099548	ENSMUSP00000097145	TRANSLATION	protein_coding	-	-	1	446	0	3.6	0	327.6	3	-4,-5	-	-	12	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000154180	ENSMUSP00000119830	TRANSLATION	protein_coding	stop	-	5	145	0	2.4	0	89.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000232274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039903	Eva1c	ENSMUST00000231280	ENSMUSP00000156225	TRANSLATION	protein_coding	-	-	-	333	0	1.84	3.9	256.8	3	-4,-2	-	-	5.644	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000232665	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039903	Eva1c	ENSMUST00000130868	ENSMUSP00000121430	TRANSLATION	nonsense_mediated_decay	-	-	1	70	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039903	Eva1c	ENSMUST00000037539	ENSMUSP00000036695	TRANSLATION	protein_coding	-	CCDS57038.1	1	440	0	3.6	5.1	327.6	3	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000074892	B3galt5	ENSMUST00000099497	ENSMUSP00000097096	TRANSLATION	protein_coding	-	CCDS28356.1	1	308	0	0	1.5	197.3	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074892	B3galt5	ENSMUST00000134058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074892	B3galt5	ENSMUST00000113800	ENSMUSP00000109431	TRANSLATION	protein_coding	-	CCDS28356.1	1	308	0	0	1.5	197.3	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000074892	B3galt5	ENSMUST00000153586	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022715	Tmem114	ENSMUST00000023400	ENSMUSP00000023400	TRANSLATION	protein_coding	-	CCDS27937.1	1	222	0	1.365	1.5	107	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000046961	Gpr156	ENSMUST00000061274	ENSMUSP00000055958	TRANSLATION	protein_coding	-	CCDS28162.1	1	798	0	0	0.5	138.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022801	Lrch3	ENSMUST00000163428	ENSMUSP00000133034	TRANSLATION	protein_coding	start/stop	-	3	265	0	0.764	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022801	Lrch3	ENSMUST00000156928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022801	Lrch3	ENSMUST00000165616	ENSMUSP00000130009	TRANSLATION	protein_coding	-	-	5	624	0	3.924	0	38.6	0	-2,-5	-	-	2.112	MINOR
ENSMUSG00000022801	Lrch3	ENSMUST00000142290	ENSMUSP00000117302	TRANSLATION	protein_coding	start/stop	-	5	253	0	0.764	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022801	Lrch3	ENSMUST00000170201	ENSMUSP00000126964	TRANSLATION	protein_coding	-	CCDS79450.1	1	742	0	6.724	0.5	102.2	0	-2,-5	-	-	11.526	ALTERNATIVE:2
ENSMUSG00000022801	Lrch3	ENSMUST00000164486	ENSMUSP00000131416	TRANSLATION	nonsense_mediated_decay	-	-	3	92	0	0.2	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000022801	Lrch3	ENSMUST00000023491	ENSMUSP00000023491	TRANSLATION	protein_coding	-	CCDS37315.1	1	778	0	6.724	0.5	102.2	0	-2,-5	-	-	11.526	PRINCIPAL:3
ENSMUSG00000022801	Lrch3	ENSMUST00000165826	ENSMUSP00000126308	TRANSLATION	protein_coding	start/stop	-	5	249	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022801	Lrch3	ENSMUST00000135193	ENSMUSP00000130708	TRANSLATION	protein_coding	-	CCDS84225.1	5	796	0	6.324	0.5	110.1	0	-2,-5	-	-	11.202	ALTERNATIVE:2
ENSMUSG00000022801	Lrch3	ENSMUST00000133399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022801	Lrch3	ENSMUST00000170899	ENSMUSP00000127547	TRANSLATION	protein_coding	-	CCDS79451.1	1	692	0	6.724	0.5	102.2	0	-2,-5	-	-	11.526	ALTERNATIVE:2
ENSMUSG00000003166	Dgcr2	ENSMUST00000117945	ENSMUSP00000112783	TRANSLATION	protein_coding	-	CCDS49785.1	1	546	4	1.64	5.1	118.2	2	2,-3	-	-	18	ALTERNATIVE:1
ENSMUSG00000003166	Dgcr2	ENSMUST00000155611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003166	Dgcr2	ENSMUST00000135229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003166	Dgcr2	ENSMUST00000066127	ENSMUSP00000064603	TRANSLATION	protein_coding	-	-	1	478	4	1.64	0	118.2	2	2,-3	-	-	16	MINOR
ENSMUSG00000003166	Dgcr2	ENSMUST00000126919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003166	Dgcr2	ENSMUST00000155943	ENSMUSP00000156306	TRANSLATION	protein_coding	-	-	5	326	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000003166	Dgcr2	ENSMUST00000231750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003166	Dgcr2	ENSMUST00000012152	ENSMUSP00000012152	TRANSLATION	protein_coding	-	CCDS37276.1	1	549	4	1.64	5.1	118.2	2	2,-3	-	-	18	PRINCIPAL:3
ENSMUSG00000003166	Dgcr2	ENSMUST00000117082	ENSMUSP00000113506	TRANSLATION	protein_coding	-	-	1	548	4	1.64	5.1	118.2	2	2,-3	-	-	18	ALTERNATIVE:1
ENSMUSG00000003166	Dgcr2	ENSMUST00000231306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062105	Olfr183	ENSMUST00000206303	ENSMUSP00000145583	TRANSLATION	protein_coding	-	CCDS28241.1	3	309	0	0	8.8	160.2	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062105	Olfr183	ENSMUST00000214831	ENSMUSP00000149404	TRANSLATION	protein_coding	-	CCDS28241.1	5	309	0	0	8.8	160.2	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062105	Olfr183	ENSMUST00000213465	ENSMUSP00000150952	TRANSLATION	protein_coding	-	CCDS28241.1	5	309	0	0	8.8	160.2	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062105	Olfr183	ENSMUST00000073320	ENSMUSP00000080602	TRANSLATION	protein_coding	-	CCDS28241.1	2	309	0	0	8.8	160.2	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000062105	Olfr183	ENSMUST00000214916	ENSMUSP00000149279	TRANSLATION	protein_coding	-	CCDS28241.1	5	309	0	0	8.8	160.2	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000041566	Tssk1	ENSMUST00000046937	ENSMUSP00000040302	TRANSLATION	protein_coding	-	CCDS28011.1	-	365	17	0.6	2.7	223.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068068	Gm7735	ENSMUST00000089098	ENSMUSP00000086499	TRANSLATION	protein_coding	-	-	-	52	0	0	0.5	35.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022770	Dlg1	ENSMUST00000064477	ENSMUSP00000064280	TRANSLATION	protein_coding	-	CCDS28107.1	1	927	19	20.11	6.5	841.8	0	-4,-7	-	-	19.142	PRINCIPAL:3
ENSMUSG00000022770	Dlg1	ENSMUST00000140258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022770	Dlg1	ENSMUST00000023454	ENSMUSP00000023454	TRANSLATION	protein_coding	-	CCDS57026.1	1	872	19	19.71	5.3	776.6	0	-4,-7	-	-	13.99	MINOR
ENSMUSG00000022770	Dlg1	ENSMUST00000137322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022770	Dlg1	ENSMUST00000130920	ENSMUSP00000138804	TRANSLATION	nonsense_mediated_decay	start	-	3	30	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022770	Dlg1	ENSMUST00000132176	ENSMUSP00000138782	TRANSLATION	nonsense_mediated_decay	-	-	1	558	6	10.98	0	485.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022770	Dlg1	ENSMUST00000115196	ENSMUSP00000110850	TRANSLATION	protein_coding	-	CCDS57027.1	1	834	19	18.41	4.1	650.7	0	-4,-2	-	-	8.868	MINOR
ENSMUSG00000022770	Dlg1	ENSMUST00000147382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022770	Dlg1	ENSMUST00000131136	ENSMUSP00000115954	TRANSLATION	protein_coding	start/stop	-	1	358	3	8.85	0	224.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022770	Dlg1	ENSMUST00000138213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022770	Dlg1	ENSMUST00000115205	ENSMUSP00000110859	TRANSLATION	protein_coding	-	CCDS57025.1	1	905	19	20.21	6.5	841.8	0	-4,-7	-	-	19.34	ALTERNATIVE:1
ENSMUSG00000022770	Dlg1	ENSMUST00000100001	ENSMUSP00000097581	TRANSLATION	protein_coding	-	CCDS57025.1	5	905	19	20.21	6.5	841.8	0	-4,-7	-	-	19.34	ALTERNATIVE:1
ENSMUSG00000022770	Dlg1	ENSMUST00000155958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022770	Dlg1	ENSMUST00000115201	ENSMUSP00000110855	TRANSLATION	protein_coding	-	-	5	912	19	20.54	3.9	841.8	0	-4,-7	-	-	19.054	ALTERNATIVE:2
ENSMUSG00000022770	Dlg1	ENSMUST00000155847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035699	Slc51a	ENSMUST00000042042	ENSMUSP00000046286	TRANSLATION	protein_coding	-	CCDS28121.1	1	340	0	0	6.3	121.9	6	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000035699	Slc51a	ENSMUST00000232418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035699	Slc51a	ENSMUST00000231690	ENSMUSP00000155959	TRANSLATION	nonsense_mediated_decay	-	-	-	178	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000060663	Olfr175	ENSMUST00000079955	ENSMUSP00000078873	TRANSLATION	protein_coding	-	CCDS28237.1	2	308	0	0.2	6.4	175.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000060663	Olfr175	ENSMUST00000215069	ENSMUSP00000150202	TRANSLATION	protein_coding	-	CCDS28237.1	5	308	0	0.2	6.4	175.5	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000022951	Rcan1	ENSMUST00000060005	ENSMUSP00000060394	TRANSLATION	protein_coding	-	CCDS37405.1	1	251	0	2.38	3.9	210.8	0	-4,-5	-	-	12.339	MINOR
ENSMUSG00000022951	Rcan1	ENSMUST00000231410	ENSMUSP00000156110	TRANSLATION	protein_coding	-	-	-	118	0	0.93	2.4	141.5	0	-4,-6	-	-	4.413	MINOR
ENSMUSG00000022951	Rcan1	ENSMUST00000231813	ENSMUSP00000156351	TRANSLATION	nonsense_mediated_decay	start	-	-	59	0	0	0	43.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022951	Rcan1	ENSMUST00000232457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022951	Rcan1	ENSMUST00000232197	ENSMUSP00000155863	TRANSLATION	protein_coding	-	-	-	118	0	0.93	2.4	141.5	0	-4,-6	-	-	4.413	MINOR
ENSMUSG00000022951	Rcan1	ENSMUST00000023672	ENSMUSP00000023672	TRANSLATION	protein_coding	-	CCDS28337.1	1	198	0	2.68	9.6	208.6	0	-4,-7	-	-	14.868	PRINCIPAL:1
ENSMUSG00000022951	Rcan1	ENSMUST00000232239	ENSMUSP00000156053	TRANSLATION	protein_coding	-	-	-	198	0	2.38	0	210.8	0	-4,-5	-	-	11.328	MINOR
ENSMUSG00000054939	Zfp174	ENSMUST00000041778	ENSMUSP00000045805	TRANSLATION	protein_coding	-	CCDS37238.1	1	407	12	1.6	3.9	189.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022641	Bbx	ENSMUST00000066037	ENSMUSP00000066384	TRANSLATION	protein_coding	-	-	1	829	0	0.6	0	121.3	0	-4,-5	-	-	2.25	MINOR
ENSMUSG00000022641	Bbx	ENSMUST00000089404	ENSMUSP00000086826	TRANSLATION	protein_coding	-	CCDS84241.1	1	887	0	1.6	1.5	231.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022641	Bbx	ENSMUST00000138166	ENSMUSP00000119238	TRANSLATION	protein_coding	-	CCDS37354.1	1	907	0	1.6	1.5	231	0	-4,-5	-	-	11.988	PRINCIPAL:3
ENSMUSG00000022641	Bbx	ENSMUST00000114488	ENSMUSP00000110132	TRANSLATION	protein_coding	-	CCDS37354.1	1	907	0	1.6	1.5	231	0	-4,-5	-	-	11.988	PRINCIPAL:3
ENSMUSG00000022641	Bbx	ENSMUST00000089399	ENSMUSP00000086821	TRANSLATION	protein_coding	stop	-	1	750	0	1.6	0	231.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022641	Bbx	ENSMUST00000131695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022641	Bbx	ENSMUST00000142818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022641	Bbx	ENSMUST00000114477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022641	Bbx	ENSMUST00000130210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051989	Smim11	ENSMUST00000063641	ENSMUSP00000070724	TRANSLATION	protein_coding	-	CCDS37404.1	1	55	0	0	7.5	89.7	1	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000051989	Smim11	ENSMUST00000118064	ENSMUSP00000113086	TRANSLATION	protein_coding	-	CCDS37404.1	2	55	0	0	7.5	89.7	1	0,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000022516	Nudt16l1	ENSMUST00000229961	ENSMUSP00000154873	TRANSLATION	protein_coding	-	-	-	199	12	3.3	0	0	0	-4,-5	-	-	10.602	MINOR
ENSMUSG00000022516	Nudt16l1	ENSMUST00000230201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022516	Nudt16l1	ENSMUST00000230931	ENSMUSP00000155142	TRANSLATION	protein_coding	-	CCDS27927.1	-	211	12	4	3.9	0	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022516	Nudt16l1	ENSMUST00000050881	ENSMUSP00000054201	TRANSLATION	protein_coding	-	-	1	151	9	2	0.5	0	0	-4,-5	-	-	6	MINOR
ENSMUSG00000022516	Nudt16l1	ENSMUST00000230224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033210	Slc9c1	ENSMUST00000162774	ENSMUSP00000137925	TRANSLATION	nonsense_mediated_decay	start	-	1	163	0	0	0	48.2	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000033210	Slc9c1	ENSMUST00000159945	ENSMUSP00000124969	TRANSLATION	protein_coding	-	CCDS28198.2	1	1175	14	0.66	0.5	138.3	19	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000033210	Slc9c1	ENSMUST00000162151	ENSMUSP00000137721	TRANSLATION	nonsense_mediated_decay	start	-	1	520	0	0	0	103.7	17	-3,-5	-	-	-1	MINOR
ENSMUSG00000033177	Tmprss7	ENSMUST00000114562	ENSMUSP00000110209	TRANSLATION	protein_coding	-	CCDS37347.2	1	829	20	4.92	2.7	379.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000033177	Tmprss7	ENSMUST00000169421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033177	Tmprss7	ENSMUST00000178323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033177	Tmprss7	ENSMUST00000178150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033177	Tmprss7	ENSMUST00000170951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045521	Tssk2	ENSMUST00000055374	ENSMUSP00000051035	TRANSLATION	protein_coding	-	CCDS28012.1	-	358	17	0.6	8.8	218.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022538	Lsg1	ENSMUST00000143170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022538	Lsg1	ENSMUST00000123286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022538	Lsg1	ENSMUST00000150499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022538	Lsg1	ENSMUST00000144666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022538	Lsg1	ENSMUST00000124858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022538	Lsg1	ENSMUST00000117363	ENSMUSP00000112860	TRANSLATION	protein_coding	-	CCDS37311.1	1	644	14	1.93	0.5	49.3	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022538	Lsg1	ENSMUST00000129004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022538	Lsg1	ENSMUST00000231238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022538	Lsg1	ENSMUST00000128561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008393	Carhsp1	ENSMUST00000008537	ENSMUSP00000008537	TRANSLATION	protein_coding	-	CCDS27942.1	1	148	0	3	0.5	46.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050821	Fam131a	ENSMUST00000118919	ENSMUSP00000113719	TRANSLATION	protein_coding	-	-	5	276	0	0	6.3	461.7	0	-4,-1	-	-	7.49	ALTERNATIVE:1
ENSMUSG00000050821	Fam131a	ENSMUST00000149543	ENSMUSP00000114318	TRANSLATION	protein_coding	stop	-	2	37	0	0	0	75.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000050821	Fam131a	ENSMUST00000056518	ENSMUSP00000060194	TRANSLATION	protein_coding	-	CCDS28056.1	1	361	0	0	6.3	470.2	0	-4,-2	-	-	8	PRINCIPAL:2
ENSMUSG00000050821	Fam131a	ENSMUST00000128273	ENSMUSP00000120596	TRANSLATION	protein_coding	stop	-	5	202	0	0	0	362.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000050821	Fam131a	ENSMUST00000232207	ENSMUSP00000156118	TRANSLATION	protein_coding	stop	-	-	170	0	0	0	322.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000048642	ENSMUSP00000045361	TRANSLATION	protein_coding	-	CCDS28044.1	1	377	0	0	7.6	102.4	9	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000033918	Parl	ENSMUST00000136700	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033918	Parl	ENSMUST00000143648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033918	Parl	ENSMUST00000152887	ENSMUSP00000155904	TRANSLATION	protein_coding	-	-	5	188	0	0	1.2	102.4	6	-4,-7	-	-	6.09	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000231547	ENSMUSP00000156245	TRANSLATION	nonsense_mediated_decay	start	-	-	68	0	0	0	53.7	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000232484	ENSMUSP00000156379	TRANSLATION	nonsense_mediated_decay	-	-	-	103	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000123070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033918	Parl	ENSMUST00000133153	ENSMUSP00000119060	TRANSLATION	nonsense_mediated_decay	-	-	3	119	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000232036	ENSMUSP00000155974	TRANSLATION	protein_coding	-	-	-	343	0	0	2.4	50.5	8	-4,-2	-	-	3.522	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000153275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033918	Parl	ENSMUST00000126001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033918	Parl	ENSMUST00000136252	ENSMUSP00000119470	TRANSLATION	nonsense_mediated_decay	-	-	5	171	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000033918	Parl	ENSMUST00000155832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063163	Speer2	ENSMUST00000166256	ENSMUSP00000130270	TRANSLATION	protein_coding	start/stop	-	3	92	0	0	0	47.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063163	Speer2	ENSMUST00000164146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063163	Speer2	ENSMUST00000076500	ENSMUSP00000075821	TRANSLATION	protein_coding	-	CCDS37375.1	2	264	0	0	0.5	91	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022829	Stxbp5l	ENSMUST00000123629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022829	Stxbp5l	ENSMUST00000151910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022829	Stxbp5l	ENSMUST00000149984	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022829	Stxbp5l	ENSMUST00000114782	ENSMUSP00000110430	TRANSLATION	protein_coding	-	CCDS49847.1	5	1161	0	6.73	0.5	124.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022829	Stxbp5l	ENSMUST00000114780	ENSMUSP00000110428	TRANSLATION	protein_coding	-	CCDS49846.1	5	1104	0	6.73	0.5	124.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022829	Stxbp5l	ENSMUST00000114787	ENSMUSP00000110435	TRANSLATION	protein_coding	-	CCDS28159.2	5	1185	0	6.73	1.5	124.9	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000022829	Stxbp5l	ENSMUST00000023526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022829	Stxbp5l	ENSMUST00000149790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022829	Stxbp5l	ENSMUST00000114775	ENSMUSP00000110423	TRANSLATION	protein_coding	-	-	1	466	0	4.47	0	124.9	0	-4,-7	-	-	7.482	MINOR
ENSMUSG00000022829	Stxbp5l	ENSMUST00000114781	ENSMUSP00000110429	TRANSLATION	protein_coding	-	CCDS49848.1	5	1128	0	6.73	0.5	124.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000033383	Rtp1	ENSMUST00000038730	ENSMUSP00000043416	TRANSLATION	protein_coding	-	CCDS28078.1	1	263	0	0	7.5	79.9	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000063137	Olfr177	ENSMUST00000072853	ENSMUSP00000072631	TRANSLATION	protein_coding	-	CCDS49880.1	-	309	0	0.2	6.4	177.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063137	Olfr177	ENSMUST00000217377	ENSMUSP00000150269	TRANSLATION	protein_coding	-	CCDS49880.1	5	309	0	0.2	6.4	177.7	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000022967	Ifnar1	ENSMUST00000023689	ENSMUSP00000023689	TRANSLATION	protein_coding	-	CCDS28326.1	1	590	0	9.01	0.5	187.2	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022967	Ifnar1	ENSMUST00000231604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022967	Ifnar1	ENSMUST00000117748	ENSMUSP00000112670	TRANSLATION	protein_coding	-	CCDS28326.1	1	590	0	9.01	0.5	187.2	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022967	Ifnar1	ENSMUST00000123196	ENSMUSP00000119160	TRANSLATION	nonsense_mediated_decay	-	-	5	283	0	5.57	0	141.8	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022967	Ifnar1	ENSMUST00000129878	ENSMUSP00000120945	TRANSLATION	protein_coding	stop	-	5	135	0	2	0	58.3	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022967	Ifnar1	ENSMUST00000232453	ENSMUSP00000156150	TRANSLATION	nonsense_mediated_decay	start	-	-	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022967	Ifnar1	ENSMUST00000232509	ENSMUSP00000156101	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	1	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000022967	Ifnar1	ENSMUST00000145008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034064	Poglut1	ENSMUST00000137762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034064	Poglut1	ENSMUST00000153187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034064	Poglut1	ENSMUST00000148093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034064	Poglut1	ENSMUST00000036210	ENSMUSP00000038166	TRANSLATION	protein_coding	-	CCDS28170.1	1	392	0	7.58	2.7	393.9	0	4,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000034064	Poglut1	ENSMUST00000149704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071533	Pcnp	ENSMUST00000122253	ENSMUSP00000113605	TRANSLATION	protein_coding	-	-	1	147	0	0	0	142.7	0	-4,-5	-	-	0.96	MINOR
ENSMUSG00000071533	Pcnp	ENSMUST00000114444	ENSMUSP00000110087	TRANSLATION	protein_coding	-	CCDS37357.1	1	178	0	0	5.2	226.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000071533	Pcnp	ENSMUST00000125040	ENSMUSP00000114818	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071533	Pcnp	ENSMUST00000130818	ENSMUSP00000115493	TRANSLATION	nonsense_mediated_decay	-	-	2	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071533	Pcnp	ENSMUST00000140227	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071533	Pcnp	ENSMUST00000096021	ENSMUSP00000093720	TRANSLATION	protein_coding	-	-	5	189	0	0	1	226.7	0	-4,-7	-	-	6	MINOR
ENSMUSG00000071533	Pcnp	ENSMUST00000137736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071533	Pcnp	ENSMUST00000119981	ENSMUSP00000112565	TRANSLATION	protein_coding	-	-	3	111	0	0	0.5	193.6	0	-4,0	-	-	4.014	MINOR
ENSMUSG00000022651	Retnlg	ENSMUST00000065666	ENSMUSP00000070238	TRANSLATION	protein_coding	-	CCDS49865.1	1	117	0	1.56	0.5	120.7	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022710	Usp7	ENSMUST00000160405	ENSMUSP00000124382	TRANSLATION	protein_coding	-	-	5	1143	4	30.08	1.5	683.6	0	-4,-2	-	-	16.153	MINOR
ENSMUSG00000022710	Usp7	ENSMUST00000161046	ENSMUSP00000124093	TRANSLATION	protein_coding	-	CCDS49755.1	1	1103	4	30.08	10.8	683.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022710	Usp7	ENSMUST00000173939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000162141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000159503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000172505	ENSMUSP00000133398	TRANSLATION	nonsense_mediated_decay	start	-	5	327	2	7	0	133.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022710	Usp7	ENSMUST00000162929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000159387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000159509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000160326	ENSMUSP00000124576	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022710	Usp7	ENSMUST00000159287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000159281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022710	Usp7	ENSMUST00000162445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022762	Ncam2	ENSMUST00000037785	ENSMUSP00000049390	TRANSLATION	protein_coding	-	CCDS28281.1	1	727	0	13.85	0.5	384.1	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000022762	Ncam2	ENSMUST00000232550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022762	Ncam2	ENSMUST00000067602	ENSMUSP00000063468	TRANSLATION	protein_coding	-	CCDS49888.1	1	837	0	13.85	0.5	384.1	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000022762	Ncam2	ENSMUST00000231687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003234	Abcf3	ENSMUST00000232490	ENSMUSP00000156056	TRANSLATION	protein_coding	start/stop	-	-	177	9	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003234	Abcf3	ENSMUST00000154660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003234	Abcf3	ENSMUST00000232127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003234	Abcf3	ENSMUST00000231590	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003234	Abcf3	ENSMUST00000003319	ENSMUSP00000003319	TRANSLATION	protein_coding	-	CCDS28049.1	1	709	28	10.0086	8.8	136.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000003234	Abcf3	ENSMUST00000135861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003234	Abcf3	ENSMUST00000232680	ENSMUSP00000156048	TRANSLATION	protein_coding	stop	-	-	577	20	7.7586	0	99.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003234	Abcf3	ENSMUST00000231258	ENSMUSP00000156298	TRANSLATION	protein_coding	start/stop	-	-	192	9	3.1986	0	24.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003234	Abcf3	ENSMUST00000148679	ENSMUSP00000155980	TRANSLATION	protein_coding	start	-	1	109	7	2.3526	0	35.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003234	Abcf3	ENSMUST00000152339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022901	Cd86	ENSMUST00000145506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022901	Cd86	ENSMUST00000135280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022901	Cd86	ENSMUST00000154485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022901	Cd86	ENSMUST00000089620	ENSMUSP00000087047	TRANSLATION	protein_coding	-	CCDS28155.1	1	309	0	1.32	0.5	27.8	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000022900	Ildr1	ENSMUST00000128084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022900	Ildr1	ENSMUST00000023617	ENSMUSP00000023617	TRANSLATION	protein_coding	-	CCDS70718.1	1	537	0	0	0.5	84.9	3	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000022900	Ildr1	ENSMUST00000089618	ENSMUSP00000087045	TRANSLATION	protein_coding	-	CCDS70719.1	1	493	0	0	0.5	84.9	3	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000022900	Ildr1	ENSMUST00000153802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022900	Ildr1	ENSMUST00000119464	ENSMUSP00000112539	TRANSLATION	protein_coding	-	CCDS49841.1	1	516	0	0	0.5	84.9	3	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000095620	Csta2	ENSMUST00000063539	ENSMUSP00000067712	TRANSLATION	protein_coding	-	CCDS37330.1	1	97	0	2.75	7.1	80.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095620	Csta2	ENSMUST00000187183	ENSMUSP00000140745	TRANSLATION	protein_coding	-	CCDS37330.1	1	97	0	2.75	7.1	80.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095620	Csta2	ENSMUST00000187742	ENSMUSP00000139876	TRANSLATION	protein_coding	-	CCDS37330.1	1	97	0	2.75	7.1	80.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000095928	Olfr204	ENSMUST00000072517	ENSMUSP00000072332	TRANSLATION	protein_coding	-	CCDS28253.1	-	305	0	0.2	4	165.4	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000095928	Olfr204	ENSMUST00000216261	ENSMUSP00000151176	TRANSLATION	protein_coding	-	CCDS28253.1	3	305	0	0.2	4	165.4	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000071636	Rimbp3	ENSMUST00000169803	ENSMUSP00000127909	TRANSLATION	protein_coding	-	CCDS27998.2	-	1606	0	0	0.5	90.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000107002	0610012G03Rik	ENSMUST00000202722	ENSMUSP00000143811	TRANSLATION	protein_coding	-	-	-	95	0	0	2.4	0	0	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000060636	Rpl35a	ENSMUST00000078804	ENSMUSP00000077857	TRANSLATION	protein_coding	-	CCDS28126.1	1	110	0	0.68	21.5	160.9	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000060636	Rpl35a	ENSMUST00000232188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060636	Rpl35a	ENSMUST00000115075	ENSMUSP00000110727	TRANSLATION	protein_coding	-	CCDS28126.1	1	110	0	0.68	21.5	160.9	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000060636	Rpl35a	ENSMUST00000115076	ENSMUSP00000110728	TRANSLATION	protein_coding	-	CCDS28126.1	2	110	0	0.68	21.5	160.9	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000060636	Rpl35a	ENSMUST00000133785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060636	Rpl35a	ENSMUST00000115079	ENSMUSP00000110731	TRANSLATION	protein_coding	-	CCDS28126.1	2	110	0	0.68	21.5	160.9	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000060636	Rpl35a	ENSMUST00000137720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060636	Rpl35a	ENSMUST00000115078	ENSMUSP00000110730	TRANSLATION	protein_coding	-	CCDS28126.1	1	110	0	0.68	21.5	160.9	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000022860	Chodl	ENSMUST00000069148	ENSMUSP00000063961	TRANSLATION	protein_coding	-	-	1	292	5	1.555	0.5	58.4	3	4,-2	-	-	17	MINOR
ENSMUSG00000022860	Chodl	ENSMUST00000231883	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022860	Chodl	ENSMUST00000232415	ENSMUSP00000156041	TRANSLATION	protein_coding	-	-	-	268	5	1.555	0	58.4	3	4,-2	-	-	17	MINOR
ENSMUSG00000022860	Chodl	ENSMUST00000023568	ENSMUSP00000023568	TRANSLATION	protein_coding	-	CCDS28279.1	1	273	5	1.555	7.5	58.4	3	4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000022860	Chodl	ENSMUST00000114216	ENSMUSP00000109854	TRANSLATION	protein_coding	-	-	1	246	5	1.555	0	58.4	3	4,-2	-	-	17	MINOR
ENSMUSG00000096534	Krtap16-3	ENSMUST00000179707	ENSMUSP00000139557	TRANSLATION	protein_coding	-	CCDS79478.1	-	86	0	0	0.5	45.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022791	Tnk2	ENSMUST00000238856	ENSMUSP00000158905	TRANSLATION	protein_coding	-	-	-	1072	18	9.64	5.1	581.7	0	-4,0	-	-	19.548	ALTERNATIVE:1
ENSMUSG00000022791	Tnk2	ENSMUST00000152361	ENSMUSP00000125905	TRANSLATION	protein_coding	stop	-	5	311	0	1.462	0	159.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000115124	ENSMUSP00000110777	TRANSLATION	protein_coding	-	CCDS37313.1	1	1055	18	9.64	3.9	581.7	0	-4,-6	-	-	19.094	PRINCIPAL:2
ENSMUSG00000022791	Tnk2	ENSMUST00000115120	ENSMUSP00000110773	TRANSLATION	protein_coding	-	CCDS84224.1	1	550	0	1.21	0.5	133.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000115126	ENSMUSP00000110779	TRANSLATION	protein_coding	-	-	5	1038	18	9.64	6.3	581.7	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000022791	Tnk2	ENSMUST00000115121	ENSMUSP00000110774	TRANSLATION	protein_coding	stop	-	3	264	0	0	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000156614	ENSMUSP00000158107	TRANSLATION	protein_coding	start/stop	-	2	290	11	4.35	0	241.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000131238	ENSMUSP00000129382	TRANSLATION	protein_coding	stop	-	5	98	0	0	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000239161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022791	Tnk2	ENSMUST00000238815	ENSMUSP00000159024	TRANSLATION	nonsense_mediated_decay	start	-	-	64	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000168506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022791	Tnk2	ENSMUST00000145627	ENSMUSP00000152338	TRANSLATION	protein_coding	stop	-	3	97	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000232650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022791	Tnk2	ENSMUST00000115122	ENSMUSP00000110775	TRANSLATION	protein_coding	stop	-	5	27	0	0	0	42.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000239117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022791	Tnk2	ENSMUST00000124585	ENSMUSP00000152549	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000238806	ENSMUSP00000159023	TRANSLATION	protein_coding	-	-	-	1040	18	9.64	6.3	581.7	0	-4,0	-	-	20	ALTERNATIVE:1
ENSMUSG00000022791	Tnk2	ENSMUST00000115123	ENSMUSP00000110776	TRANSLATION	protein_coding	-	-	5	1040	18	9.64	6.3	581.7	0	-4,-6	-	-	20	ALTERNATIVE:1
ENSMUSG00000022791	Tnk2	ENSMUST00000238891	ENSMUSP00000159113	TRANSLATION	protein_coding	-	-	-	1047	18	9.64	0.5	581.7	0	-4,-7	-	-	18	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000115125	ENSMUSP00000110778	TRANSLATION	protein_coding	-	CCDS49828.1	1	1008	18	9.64	0.5	581.7	0	-4,-6	-	-	18	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000238799	ENSMUSP00000159006	TRANSLATION	nonsense_mediated_decay	start	-	-	52	1	1	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000164358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022791	Tnk2	ENSMUST00000150383	ENSMUSP00000158981	TRANSLATION	protein_coding	stop	-	3	95	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022791	Tnk2	ENSMUST00000137044	ENSMUSP00000159002	TRANSLATION	nonsense_mediated_decay	start	-	5	211	18	3	0	161.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005981	Trap1	ENSMUST00000150354	ENSMUSP00000138307	TRANSLATION	nonsense_mediated_decay	start	-	5	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005981	Trap1	ENSMUST00000006137	ENSMUSP00000006137	TRANSLATION	protein_coding	-	CCDS27914.1	1	706	8	16.58	3.9	363	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000005981	Trap1	ENSMUST00000138594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005981	Trap1	ENSMUST00000137945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006998	Psmd2	ENSMUST00000231897	ENSMUSP00000156260	TRANSLATION	protein_coding	start	-	-	139	0	2.66	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000006998	Psmd2	ENSMUST00000172207	ENSMUSP00000127496	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006998	Psmd2	ENSMUST00000169184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006998	Psmd2	ENSMUST00000166071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006998	Psmd2	ENSMUST00000232629	ENSMUSP00000156035	TRANSLATION	protein_coding	stop	-	-	142	0	3.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006998	Psmd2	ENSMUST00000167869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006998	Psmd2	ENSMUST00000232513	ENSMUSP00000156092	TRANSLATION	nonsense_mediated_decay	start	-	-	97	0	2.066	0	0	0	0,-2	-	-	-1	MINOR
ENSMUSG00000006998	Psmd2	ENSMUST00000169195	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006998	Psmd2	ENSMUST00000007212	ENSMUSP00000007212	TRANSLATION	protein_coding	-	CCDS28053.1	1	908	0	22.16	7.5	54.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000036208	Nepro	ENSMUST00000048788	ENSMUSP00000038779	TRANSLATION	protein_coding	-	CCDS28187.1	1	564	0	0	1.5	221.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000036208	Nepro	ENSMUST00000123673	ENSMUSP00000122861	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036208	Nepro	ENSMUST00000130805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036208	Nepro	ENSMUST00000132610	ENSMUSP00000116115	TRANSLATION	nonsense_mediated_decay	start	-	2	118	0	0	0	149.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036208	Nepro	ENSMUST00000147804	ENSMUSP00000122052	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000075229	Ccdc58	ENSMUST00000231468	ENSMUSP00000156039	TRANSLATION	protein_coding	-	-	-	53	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000075229	Ccdc58	ENSMUST00000164916	ENSMUSP00000125874	TRANSLATION	protein_coding	-	CCDS28147.1	1	144	0	0	18.3	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000075229	Ccdc58	ENSMUST00000163352	ENSMUSP00000131929	TRANSLATION	protein_coding	-	CCDS49838.1	3	102	0	0	1.8	0	0	-4,-5	-	-	0.184	MINOR
ENSMUSG00000075229	Ccdc58	ENSMUST00000231773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075229	Ccdc58	ENSMUST00000099937	ENSMUSP00000097520	TRANSLATION	protein_coding	-	CCDS49839.1	3	134	0	0	2.9	0	0	-4,-5	-	-	0.44	MINOR
ENSMUSG00000075229	Ccdc58	ENSMUST00000231239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075229	Ccdc58	ENSMUST00000231523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022724	Riox2	ENSMUST00000120667	ENSMUSP00000112950	TRANSLATION	protein_coding	-	-	1	156	0	2	0	78.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022724	Riox2	ENSMUST00000131272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022724	Riox2	ENSMUST00000160571	ENSMUSP00000125297	TRANSLATION	protein_coding	-	CCDS28257.1	1	465	3	9.75	1.5	327.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022724	Riox2	ENSMUST00000138324	ENSMUSP00000121743	TRANSLATION	protein_coding	stop	-	3	73	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022724	Riox2	ENSMUST00000120674	ENSMUSP00000112899	TRANSLATION	protein_coding	-	-	1	373	3	7	0	322.7	0	-4,-5	-	-	9.228	MINOR
ENSMUSG00000022724	Riox2	ENSMUST00000023407	ENSMUSP00000023407	TRANSLATION	protein_coding	-	CCDS28257.1	1	465	3	9.75	1.5	327.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002844	Adprh	ENSMUST00000002923	ENSMUSP00000002923	TRANSLATION	protein_coding	-	CCDS28167.1	1	362	21	3	4	186	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000002844	Adprh	ENSMUST00000232145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079620	Muc4	ENSMUST00000149773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079620	Muc4	ENSMUST00000135753	ENSMUSP00000119154	TRANSLATION	protein_coding	start	-	1	1401	4	0.96	0	152.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079620	Muc4	ENSMUST00000143297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079620	Muc4	ENSMUST00000131419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079620	Muc4	ENSMUST00000142355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079620	Muc4	ENSMUST00000132475	ENSMUSP00000119029	TRANSLATION	protein_coding	stop	-	1	293	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000079620	Muc4	ENSMUST00000115119	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079620	Muc4	ENSMUST00000096106	ENSMUSP00000093813	TRANSLATION	protein_coding	-	-	5	3470	4	0.96	0.5	152.7	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000043391	2510009E07Rik	ENSMUST00000232634	ENSMUSP00000156172	TRANSLATION	nonsense_mediated_decay	-	-	-	63	0	0	0	113.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043391	2510009E07Rik	ENSMUST00000053336	ENSMUSP00000062303	TRANSLATION	protein_coding	-	CCDS28062.1	1	248	0	0	7.5	432.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000043391	2510009E07Rik	ENSMUST00000231592	ENSMUSP00000156243	TRANSLATION	protein_coding	-	-	-	63	0	0	0	113.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000043391	2510009E07Rik	ENSMUST00000232164	ENSMUSP00000156099	TRANSLATION	protein_coding	stop	-	-	140	0	0	0	211.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022512	Cldn1	ENSMUST00000232215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022512	Cldn1	ENSMUST00000023154	ENSMUSP00000023154	TRANSLATION	protein_coding	-	CCDS28087.1	1	211	0	3.55	10.8	183.7	0	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000023176	Cpn2	ENSMUST00000064856	ENSMUSP00000069318	TRANSLATION	protein_coding	-	CCDS49819.1	1	547	0	0.6	0.5	173.1	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022722	Arl6	ENSMUST00000118438	ENSMUSP00000113127	TRANSLATION	protein_coding	-	CCDS84248.1	3	193	21	5	10.4	181	0	-4,-5	-	-	19.306	MINOR
ENSMUSG00000022722	Arl6	ENSMUST00000099646	ENSMUSP00000097238	TRANSLATION	protein_coding	-	CCDS84248.1	1	193	21	5	10.4	181	0	-4,-5	-	-	19.306	MINOR
ENSMUSG00000022722	Arl6	ENSMUST00000149797	ENSMUSP00000123287	TRANSLATION	protein_coding	stop	-	3	194	18	4.5	0	122.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022722	Arl6	ENSMUST00000023405	ENSMUSP00000023405	TRANSLATION	protein_coding	-	CCDS28259.1	1	186	21	5.33	19.5	182.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000047261	Gap43	ENSMUST00000125187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047261	Gap43	ENSMUST00000102817	ENSMUSP00000099881	TRANSLATION	protein_coding	-	CCDS28177.1	1	227	0	0.2	1.5	290.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022760	Thap7	ENSMUST00000232041	ENSMUSP00000156319	TRANSLATION	protein_coding	stop	-	-	190	3	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022760	Thap7	ENSMUST00000231548	ENSMUSP00000156168	TRANSLATION	protein_coding	-	CCDS28004.1	-	309	5	1.69	6.3	56.3	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000022760	Thap7	ENSMUST00000231623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022760	Thap7	ENSMUST00000231676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022760	Thap7	ENSMUST00000231288	ENSMUSP00000155899	TRANSLATION	protein_coding	stop	-	-	178	5	1.69	0	56.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022760	Thap7	ENSMUST00000100125	ENSMUSP00000097701	TRANSLATION	protein_coding	-	CCDS28004.1	1	309	5	1.69	6.3	56.3	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000022760	Thap7	ENSMUST00000231446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022760	Thap7	ENSMUST00000231424	ENSMUSP00000156082	TRANSLATION	nonsense_mediated_decay	start	-	-	67	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022760	Thap7	ENSMUST00000232114	ENSMUSP00000156032	TRANSLATION	nonsense_mediated_decay	-	-	-	91	3	0.36	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022760	Thap7	ENSMUST00000232046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022760	Thap7	ENSMUST00000231699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049436	Upk1b	ENSMUST00000232536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049436	Upk1b	ENSMUST00000057767	ENSMUSP00000052469	TRANSLATION	protein_coding	-	CCDS28174.1	1	260	0	0	13	96.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000022853	Ehhadh	ENSMUST00000023559	ENSMUSP00000023559	TRANSLATION	protein_coding	-	CCDS28063.1	1	718	39	6.75	0.5	445.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000022822	Abcc5	ENSMUST00000231522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022822	Abcc5	ENSMUST00000134962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000127582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000115547	ENSMUSP00000111209	TRANSLATION	protein_coding	-	CCDS28045.1	5	1436	22	19.73	3.9	355.5	15	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022822	Abcc5	ENSMUST00000077867	ENSMUSP00000077031	TRANSLATION	protein_coding	stop	-	1	512	1	4.84	0	64	9	-4,-5	-	-	-1	MINOR
ENSMUSG00000022822	Abcc5	ENSMUST00000137985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000148003	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022822	Abcc5	ENSMUST00000128978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000150340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000134413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022822	Abcc5	ENSMUST00000096199	ENSMUSP00000093913	TRANSLATION	protein_coding	-	CCDS28046.1	1	208	0	1.2	2.9	0	2	-4,-5	-	-	0.655	MINOR
ENSMUSG00000022822	Abcc5	ENSMUST00000079158	ENSMUSP00000078158	TRANSLATION	protein_coding	-	CCDS28045.1	1	1436	22	19.73	3.9	355.5	15	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022822	Abcc5	ENSMUST00000232044	ENSMUSP00000156205	TRANSLATION	nonsense_mediated_decay	start	-	-	136	0	2.08	0	29.2	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000012017	Scarf2	ENSMUST00000231301	ENSMUSP00000156349	TRANSLATION	protein_coding	start/stop	-	-	141	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012017	Scarf2	ENSMUST00000012161	ENSMUSP00000012161	TRANSLATION	protein_coding	-	CCDS28010.1	1	833	0	2.42	1.5	13.4	0	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000012017	Scarf2	ENSMUST00000231383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012017	Scarf2	ENSMUST00000232577	ENSMUSP00000156358	TRANSLATION	protein_coding	-	-	-	566	0	2.42	0	13.4	0	0,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000012017	Scarf2	ENSMUST00000231329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060057	Olfr193	ENSMUST00000076262	ENSMUSP00000075611	TRANSLATION	protein_coding	-	CCDS28245.1	-	309	0	0.48	7.5	163.4	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060057	Olfr193	ENSMUST00000208455	ENSMUSP00000146393	TRANSLATION	protein_coding	-	CCDS28245.1	3	309	0	0.48	7.5	163.4	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060057	Olfr193	ENSMUST00000207935	ENSMUSP00000146443	TRANSLATION	protein_coding	stop	-	3	136	0	0.48	0	73.2	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000022948	Setd4	ENSMUST00000141789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022948	Setd4	ENSMUST00000233517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022948	Setd4	ENSMUST00000156298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022948	Setd4	ENSMUST00000154355	ENSMUSP00000156553	TRANSLATION	protein_coding	stop	-	2	241	11	2.286	0	29.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022948	Setd4	ENSMUST00000233969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022948	Setd4	ENSMUST00000152520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000232870	ENSMUSP00000156698	TRANSLATION	protein_coding	start	-	-	406	15	3.89	0	83	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022948	Setd4	ENSMUST00000140619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022948	Setd4	ENSMUST00000023669	ENSMUSP00000023669	TRANSLATION	protein_coding	-	CCDS28340.1	5	439	15	4.256	1.7	92	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022948	Setd4	ENSMUST00000123756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000233324	ENSMUSP00000156951	TRANSLATION	nonsense_mediated_decay	start	-	-	74	7	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022948	Setd4	ENSMUST00000233419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000233981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000232835	ENSMUSP00000156855	TRANSLATION	protein_coding	start	-	-	48	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022948	Setd4	ENSMUST00000233453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000233912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022948	Setd4	ENSMUST00000233931	ENSMUSP00000156723	TRANSLATION	protein_coding	-	CCDS28340.1	-	439	15	4.256	1.7	92	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000091039	Krtap20-2	ENSMUST00000169954	ENSMUSP00000126264	TRANSLATION	protein_coding	-	CCDS49900.1	-	60	0	0	0.5	42.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039345	Mettl22	ENSMUST00000142899	ENSMUSP00000120894	TRANSLATION	protein_coding	stop	-	3	208	11	1.824	0	43.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039345	Mettl22	ENSMUST00000150790	ENSMUSP00000114563	TRANSLATION	protein_coding	stop	-	5	119	14	1.154	0	21.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039345	Mettl22	ENSMUST00000151233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039345	Mettl22	ENSMUST00000133208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039345	Mettl22	ENSMUST00000046470	ENSMUSP00000044108	TRANSLATION	protein_coding	-	CCDS27938.1	1	393	20	2.552	1.5	58.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039345	Mettl22	ENSMUST00000229757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022519	Srl	ENSMUST00000230817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022519	Srl	ENSMUST00000132284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022519	Srl	ENSMUST00000023161	ENSMUSP00000023161	TRANSLATION	protein_coding	-	CCDS27918.1	1	910	24	2.52	0.5	86.9	0	3,-2	-	-	18	MINOR
ENSMUSG00000022519	Srl	ENSMUST00000133440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022519	Srl	ENSMUST00000090500	ENSMUSP00000087986	TRANSLATION	protein_coding	-	CCDS84202.1	1	472	24	2.52	7.3	86.9	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000022788	Fgd4	ENSMUST00000161188	ENSMUSP00000123763	TRANSLATION	protein_coding	-	-	2	603	4	6.29	0	250.1	0	-4,-5	-	-	9.334	MINOR
ENSMUSG00000022788	Fgd4	ENSMUST00000069284	ENSMUSP00000069573	TRANSLATION	protein_coding	stop	-	1	754	5	8.09	0	301.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022788	Fgd4	ENSMUST00000162671	ENSMUSP00000125736	TRANSLATION	protein_coding	-	CCDS27986.1	1	766	5	8.09	0.5	301.2	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022788	Fgd4	ENSMUST00000162542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000172181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000161624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000162045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000162124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000161861	ENSMUSP00000125174	TRANSLATION	protein_coding	-	CCDS27986.1	1	766	5	8.09	0.5	301.2	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022788	Fgd4	ENSMUST00000162414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000159058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022788	Fgd4	ENSMUST00000159542	ENSMUSP00000125649	TRANSLATION	protein_coding	stop	-	1	392	0	3.26	0	154.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000107252	Gm5767	ENSMUST00000202157	ENSMUSP00000148509	TRANSLATION	protein_coding	-	-	3	74	2	0	0	37.6	0	-4,-7	-	-	4.922	MINOR
ENSMUSG00000107252	Gm5767	ENSMUST00000201722	ENSMUSP00000143858	TRANSLATION	protein_coding	-	-	1	78	2	0	0	77.2	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000053414	Hunk	ENSMUST00000065856	ENSMUSP00000068007	TRANSLATION	protein_coding	-	CCDS28315.1	1	714	17	4.7	3.9	238	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000053414	Hunk	ENSMUST00000231719	ENSMUSP00000156104	TRANSLATION	protein_coding	-	-	-	638	10	4.564	0	212.3	0	-4,-5	-	-	11.52	MINOR
ENSMUSG00000053414	Hunk	ENSMUST00000231603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000109588	Lnp1	ENSMUST00000210579	ENSMUSP00000147973	TRANSLATION	protein_coding	-	CCDS84244.1	5	178	0	0	1.5	224.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022812	Gsk3b	ENSMUST00000114750	ENSMUSP00000110398	TRANSLATION	protein_coding	-	CCDS84232.1	5	433	20	10.8	14.8	229.9	0	-4,-2	-	-	21.322	ALTERNATIVE:1
ENSMUSG00000022812	Gsk3b	ENSMUST00000132057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022812	Gsk3b	ENSMUST00000023507	ENSMUSP00000023507	TRANSLATION	protein_coding	-	CCDS28163.1	1	420	20	10.5	17.3	231	0	-4,-2	-	-	21.4	PRINCIPAL:3
ENSMUSG00000022812	Gsk3b	ENSMUST00000231437	ENSMUSP00000156065	TRANSLATION	protein_coding	start	-	-	182	0	0.59	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022812	Gsk3b	ENSMUST00000134870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022956	Atp5o	ENSMUST00000155452	ENSMUSP00000118216	TRANSLATION	nonsense_mediated_decay	start	-	5	71	0	1.4	0	23.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022956	Atp5o	ENSMUST00000150642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022956	Atp5o	ENSMUST00000139277	ENSMUSP00000156380	TRANSLATION	protein_coding	stop	-	3	94	0	2.58	0	83.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022956	Atp5o	ENSMUST00000132049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022956	Atp5o	ENSMUST00000023677	ENSMUSP00000023677	TRANSLATION	protein_coding	-	CCDS28331.1	1	213	0	5.31	3.9	150.9	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000022956	Atp5o	ENSMUST00000154661	ENSMUSP00000156308	TRANSLATION	protein_coding	stop	-	5	109	0	2.4	0	42.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005580	Adcy9	ENSMUST00000120080	ENSMUSP00000113421	TRANSLATION	protein_coding	-	CCDS79418.1	1	1116	7	1.2	0.5	383	8	2,-3	-	-	18	MINOR
ENSMUSG00000005580	Adcy9	ENSMUST00000005719	ENSMUSP00000005719	TRANSLATION	protein_coding	-	CCDS27917.1	1	1353	7	1.2	5.1	383	12	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000005580	Adcy9	ENSMUST00000117801	ENSMUSP00000113498	TRANSLATION	protein_coding	-	CCDS27917.1	1	1353	7	1.2	5.1	383	12	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022827	Rabl3	ENSMUST00000130028	ENSMUSP00000122441	TRANSLATION	nonsense_mediated_decay	-	-	1	129	16	2.4	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022827	Rabl3	ENSMUST00000128036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022827	Rabl3	ENSMUST00000140799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022827	Rabl3	ENSMUST00000023524	ENSMUSP00000023524	TRANSLATION	protein_coding	-	CCDS37338.1	1	236	20	3.51	15.8	59.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052504	Epha3	ENSMUST00000064405	ENSMUSP00000066554	TRANSLATION	protein_coding	-	CCDS28264.1	1	984	19	14.45	7.6	839.6	1	2,-3	-	-	21	PRINCIPAL:2
ENSMUSG00000052504	Epha3	ENSMUST00000232049	ENSMUSP00000155946	TRANSLATION	protein_coding	-	-	-	983	19	14.45	7.6	835.7	1	2,-3	-	-	20.766	ALTERNATIVE:1
ENSMUSG00000052504	Epha3	ENSMUST00000232654	ENSMUSP00000155997	TRANSLATION	protein_coding	-	-	-	538	0	6.95	1.2	382	0	2,-3	-	-	0.09	MINOR
ENSMUSG00000052504	Epha3	ENSMUST00000232461	ENSMUSP00000155890	TRANSLATION	protein_coding	stop	-	-	204	0	3.5	0	100.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052504	Epha3	ENSMUST00000232370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052504	Epha3	ENSMUST00000231270	ENSMUSP00000156331	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0.95	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000106405	Iglj3p	ENSMUST00000200074	ENSMUSP00000143285	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000005846	Rsl1d1	ENSMUST00000124454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005846	Rsl1d1	ENSMUST00000230002	ENSMUSP00000155495	TRANSLATION	protein_coding	start/stop	-	-	238	0	0.78	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005846	Rsl1d1	ENSMUST00000129962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005846	Rsl1d1	ENSMUST00000230232	ENSMUSP00000155279	TRANSLATION	nonsense_mediated_decay	start	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005846	Rsl1d1	ENSMUST00000119953	ENSMUSP00000113431	TRANSLATION	protein_coding	-	CCDS49763.1	1	452	0	2.62	1.5	181.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091243	Vgll3	ENSMUST00000168064	ENSMUSP00000131500	TRANSLATION	protein_coding	-	CCDS49884.1	1	325	0	1	2.9	68	0	-4,-5	-	-	12.904	PRINCIPAL:1
ENSMUSG00000091243	Vgll3	ENSMUST00000228708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091243	Vgll3	ENSMUST00000227997	ENSMUSP00000153843	TRANSLATION	protein_coding	-	-	-	270	0	0.8	5.2	31	0	-4,-5	-	-	9.536	MINOR
ENSMUSG00000022947	Cbr3	ENSMUST00000231302	ENSMUSP00000156328	TRANSLATION	nonsense_mediated_decay	-	-	-	119	15	1.21	0	68.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022947	Cbr3	ENSMUST00000039620	ENSMUSP00000047712	TRANSLATION	protein_coding	-	CCDS28342.1	1	277	28	3	5.2	123.9	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000022960	Donson	ENSMUST00000023682	ENSMUSP00000023682	TRANSLATION	protein_coding	-	CCDS28330.1	1	560	0	0	1.5	0	0	-4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000022960	Donson	ENSMUST00000123893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022960	Donson	ENSMUST00000114031	ENSMUSP00000109665	TRANSLATION	protein_coding	-	-	5	489	0	0	1	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000022960	Donson	ENSMUST00000232177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022960	Donson	ENSMUST00000231425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022960	Donson	ENSMUST00000145833	ENSMUSP00000122506	TRANSLATION	nonsense_mediated_decay	start	-	5	160	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000231459	ENSMUSP00000156028	TRANSLATION	protein_coding	start	-	-	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000133942	ENSMUSP00000121386	TRANSLATION	protein_coding	start	-	5	348	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000144461	ENSMUSP00000123648	TRANSLATION	nonsense_mediated_decay	-	-	5	131	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000136699	ENSMUSP00000122778	TRANSLATION	nonsense_mediated_decay	start	-	5	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000138560	ENSMUSP00000121591	TRANSLATION	protein_coding	start	-	5	530	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022960	Donson	ENSMUST00000117159	ENSMUSP00000113220	TRANSLATION	protein_coding	-	-	1	502	0	0	0	0	0	-4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000022960	Donson	ENSMUST00000139324	ENSMUSP00000120957	TRANSLATION	nonsense_mediated_decay	-	-	1	205	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000095706	Olfr209	ENSMUST00000055868	ENSMUSP00000053192	TRANSLATION	protein_coding	-	CCDS57032.1	-	305	0	0.74	2.7	167.5	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095706	Olfr209	ENSMUST00000213779	ENSMUSP00000151413	TRANSLATION	protein_coding	-	CCDS84247.1	5	103	0	0.6	0.5	45.5	3	-4,-7	-	-	4.866	MINOR
ENSMUSG00000095706	Olfr209	ENSMUST00000208875	ENSMUSP00000147068	TRANSLATION	protein_coding	-	CCDS57032.1	2	305	0	0.74	2.7	167.5	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095706	Olfr209	ENSMUST00000208246	ENSMUSP00000146910	TRANSLATION	protein_coding	-	CCDS84247.1	1	103	0	0.6	0.5	45.5	3	-4,-7	-	-	4.866	MINOR
ENSMUSG00000116933	Atp5o	ENSMUST00000159295	ENSMUSP00000125172	TRANSLATION	protein_coding,RT	start/stop	-	5	176	0	2.14	0	50.1	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000061361	Olfr168	ENSMUST00000213480	ENSMUSP00000149405	TRANSLATION	protein_coding	-	CCDS28036.1	5	312	0	0.28	7.5	168.9	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000061361	Olfr168	ENSMUST00000078554	ENSMUSP00000077632	TRANSLATION	protein_coding	-	CCDS28036.1	-	312	0	0.28	7.5	168.9	6	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022857	Tmprss15	ENSMUST00000060402	ENSMUSP00000052034	TRANSLATION	protein_coding	-	CCDS37380.1	2	1054	10	5.6	0.5	652.1	1	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000022857	Tmprss15	ENSMUST00000023566	ENSMUSP00000023566	TRANSLATION	protein_coding	-	CCDS28280.1	1	1069	10	5.6	0.5	652.1	1	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000060691	Krtap19-1	ENSMUST00000081334	ENSMUSP00000132718	TRANSLATION	protein_coding	-	CCDS49894.1	-	87	0	0	0.5	44.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000104975	Iglj2	ENSMUST00000197969	ENSMUSP00000142566	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000057880	Abat	ENSMUST00000128459	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057880	Abat	ENSMUST00000065987	ENSMUSP00000063548	TRANSLATION	protein_coding	-	CCDS27939.1	1	500	12	12.66	7.5	462.8	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000057880	Abat	ENSMUST00000144444	ENSMUSP00000121881	TRANSLATION	protein_coding	start	-	3	109	7	2.49	0	64.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057880	Abat	ENSMUST00000115839	ENSMUSP00000111505	TRANSLATION	protein_coding	-	CCDS49754.1	1	444	8	11.66	0.5	355.2	0	-4,0	-	-	7.338	MINOR
ENSMUSG00000057880	Abat	ENSMUST00000140795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057880	Abat	ENSMUST00000138987	ENSMUSP00000116686	TRANSLATION	protein_coding	start/stop	-	3	232	7	6.58	0	120.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057880	Abat	ENSMUST00000115838	ENSMUSP00000111504	TRANSLATION	protein_coding	-	-	2	204	7	5.07	0	114.8	0	-4,0	-	-	2.664	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000232117	ENSMUSP00000156322	TRANSLATION	protein_coding	start	-	-	527	9	8.18	0	363.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000231966	ENSMUSP00000156239	TRANSLATION	protein_coding	start/stop	-	-	154	7	0.82	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000023465	ENSMUSP00000023465	TRANSLATION	protein_coding	-	CCDS27990.1	1	862	10	12.714	8.5	467.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000022779	Top3b	ENSMUST00000232547	ENSMUSP00000156017	TRANSLATION	protein_coding	stop	-	-	33	1	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000231834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000232017	ENSMUSP00000155905	TRANSLATION	protein_coding	stop	-	-	233	1	5.134	0	126.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000232523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000231812	ENSMUSP00000156369	TRANSLATION	protein_coding	stop	-	-	69	1	1.964	0	29	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232080	ENSMUSP00000155903	TRANSLATION	protein_coding	stop	-	-	289	1	6.184	0	160.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000231402	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000231278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000231576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000232231	ENSMUSP00000155935	TRANSLATION	protein_coding	stop	-	-	118	1	3.104	0	46.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000231432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022779	Top3b	ENSMUST00000232200	ENSMUSP00000155870	TRANSLATION	protein_coding	stop	-	-	55	1	1.014	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022779	Top3b	ENSMUST00000232581	ENSMUSP00000156132	TRANSLATION	protein_coding	-	CCDS27990.1	-	862	10	12.714	8.5	467.1	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000002489	Tiam1	ENSMUST00000002588	ENSMUSP00000002588	TRANSLATION	protein_coding	-	CCDS28314.1	1	1591	0	18.28	6.3	324.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000002489	Tiam1	ENSMUST00000114122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000163370	ENSMUSP00000132137	TRANSLATION	protein_coding	-	CCDS28314.1	1	1591	0	18.28	6.3	324.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000002489	Tiam1	ENSMUST00000155915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000178095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000144691	ENSMUSP00000136283	TRANSLATION	protein_coding	start	-	5	92	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002489	Tiam1	ENSMUST00000136760	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000089084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002489	Tiam1	ENSMUST00000164263	ENSMUSP00000126020	TRANSLATION	protein_coding	-	CCDS49904.1	1	622	0	10.08	6.1	178.9	0	-4,-7	-	-	1.924	MINOR
ENSMUSG00000002489	Tiam1	ENSMUST00000151655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000134021	ENSMUSP00000137637	TRANSLATION	protein_coding	start	-	1	168	0	3.58	0	37	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002489	Tiam1	ENSMUST00000114124	ENSMUSP00000109759	TRANSLATION	protein_coding	-	-	5	900	0	5.35	0	56.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000002489	Tiam1	ENSMUST00000124433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002489	Tiam1	ENSMUST00000130951	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002489	Tiam1	ENSMUST00000139544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052316	Lrrc15	ENSMUST00000064606	ENSMUSP00000066777	TRANSLATION	protein_coding	-	CCDS28099.1	1	579	0	0.6	2.7	237.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022686	B3gnt5	ENSMUST00000164397	ENSMUSP00000126157	TRANSLATION	protein_coding	-	CCDS28040.1	5	376	0	0	3.9	160.5	1	-2,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000022686	B3gnt5	ENSMUST00000119468	ENSMUSP00000113145	TRANSLATION	protein_coding	-	CCDS28040.1	1	376	0	0	3.9	160.5	1	-2,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000022686	B3gnt5	ENSMUST00000079780	ENSMUSP00000078712	TRANSLATION	protein_coding	-	CCDS28040.1	1	376	0	0	3.9	160.5	1	-2,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000022686	B3gnt5	ENSMUST00000155780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022686	B3gnt5	ENSMUST00000152845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022686	B3gnt5	ENSMUST00000121344	ENSMUSP00000112624	TRANSLATION	protein_coding	-	CCDS28040.1	1	376	0	0	3.9	160.5	1	-2,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000022686	B3gnt5	ENSMUST00000131557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058368	Krtap21-1	ENSMUST00000078422	ENSMUSP00000077524	TRANSLATION	protein_coding	-	CCDS28311.1	-	128	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022878	Adipoq	ENSMUST00000171309	ENSMUSP00000126793	TRANSLATION	protein_coding	stop	-	3	168	0	1.4	0	37	0	2,-2	-	-	-1	MINOR
ENSMUSG00000022878	Adipoq	ENSMUST00000023593	ENSMUSP00000023593	TRANSLATION	protein_coding	-	CCDS28075.1	1	247	3	2.4	0.5	179	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000022938	Fam3b	ENSMUST00000231414	ENSMUSP00000155878	TRANSLATION	protein_coding	-	-	-	246	0	5.75	0	99.2	0	-2,0	-	-	11.34	MINOR
ENSMUSG00000022938	Fam3b	ENSMUST00000232018	ENSMUSP00000156087	TRANSLATION	protein_coding	-	-	-	107	0	2.5	0	65.1	0	-4,-5	-	-	3.936	MINOR
ENSMUSG00000022938	Fam3b	ENSMUST00000049721	ENSMUSP00000062006	TRANSLATION	protein_coding	-	CCDS37416.1	1	235	0	6.08	5.1	99.2	0	1,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000022938	Fam3b	ENSMUST00000231999	ENSMUSP00000156261	TRANSLATION	protein_coding	-	-	-	187	0	5.08	2.4	99.2	0	-4,-6	-	-	10.684	MINOR
ENSMUSG00000022938	Fam3b	ENSMUST00000125475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022938	Fam3b	ENSMUST00000231641	ENSMUSP00000156165	TRANSLATION	protein_coding	-	-	-	107	0	2.5	0	65.1	0	-4,-5	-	-	3.936	MINOR
ENSMUSG00000058172	Krtap6-1	ENSMUST00000076906	ENSMUSP00000076172	TRANSLATION	protein_coding	-	CCDS37389.1	-	78	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000022935	Grik1	ENSMUST00000228034	ENSMUSP00000154596	TRANSLATION	protein_coding	-	-	-	871	13	14.2	0	594.3	5	-2,-6	-	-	16.218	MINOR
ENSMUSG00000022935	Grik1	ENSMUST00000210910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022935	Grik1	ENSMUST00000228188	ENSMUSP00000154130	TRANSLATION	protein_coding	-	-	-	920	13	14.84	7.5	594.3	5	-2,-6	-	-	20.502	ALTERNATIVE:1
ENSMUSG00000022935	Grik1	ENSMUST00000072256	ENSMUSP00000072107	TRANSLATION	protein_coding	-	CCDS84255.1	1	934	13	14.715	7.5	594.3	5	-2,-6	-	-	20.25	PRINCIPAL:4
ENSMUSG00000022935	Grik1	ENSMUST00000211444	ENSMUSP00000147948	TRANSLATION	protein_coding	-	CCDS84256.1	1	903	13	14.65	2.9	594.3	5	-2,-6	-	-	17.994	MINOR
ENSMUSG00000022935	Grik1	ENSMUST00000227986	ENSMUSP00000153786	TRANSLATION	protein_coding	-	-	-	949	13	14.465	7.5	594.3	5	-2,-6	-	-	19.752	MINOR
ENSMUSG00000022935	Grik1	ENSMUST00000023652	ENSMUSP00000023652	TRANSLATION	protein_coding	-	CCDS84254.1	1	905	13	15.09	7.5	594.3	5	-2,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000022935	Grik1	ENSMUST00000114137	ENSMUSP00000109773	TRANSLATION	protein_coding	-	-	5	832	13	13.45	0	570.3	5	-4,-5	-	-	13.278	MINOR
ENSMUSG00000022935	Grik1	ENSMUST00000210700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022935	Grik1	ENSMUST00000211635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022935	Grik1	ENSMUST00000226447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000028	Cdc45	ENSMUST00000115585	ENSMUSP00000111248	TRANSLATION	protein_coding	stop	-	2	136	0	4	0	125.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000000028	Cdc45	ENSMUST00000096990	ENSMUSP00000094753	TRANSLATION	protein_coding	-	CCDS49788.1	1	520	0	13.375	2.9	453.9	0	-4,-6	-	-	8.271	MINOR
ENSMUSG00000000028	Cdc45	ENSMUST00000231819	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000028	Cdc45	ENSMUST00000000028	ENSMUSP00000000028	TRANSLATION	protein_coding	-	CCDS28027.1	1	566	0	14.375	7.1	498.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000039637	Coro7	ENSMUST00000139072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000127125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000151156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000127850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000123031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000150028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039637	Coro7	ENSMUST00000090480	ENSMUSP00000087966	TRANSLATION	protein_coding	-	-	1	288	0	4.845	0	91.1	0	-4,-1	-	-	0	MINOR
ENSMUSG00000039637	Coro7	ENSMUST00000135823	ENSMUSP00000118310	TRANSLATION	nonsense_mediated_decay	-	-	1	298	0	4.985	0	91.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039637	Coro7	ENSMUST00000130125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039637	Coro7	ENSMUST00000038552	ENSMUSP00000048489	TRANSLATION	protein_coding	-	CCDS37242.1	1	922	0	14.22	1.5	301.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039637	Coro7	ENSMUST00000143723	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039637	Coro7	ENSMUST00000150724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022664	Slc35a5	ENSMUST00000181377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022664	Slc35a5	ENSMUST00000181437	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022664	Slc35a5	ENSMUST00000114600	ENSMUSP00000110247	TRANSLATION	protein_coding	-	-	3	179	0	0	0	45	9	-3,-6	-	-	0	MINOR
ENSMUSG00000022664	Slc35a5	ENSMUST00000181750	ENSMUSP00000137937	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000022664	Slc35a5	ENSMUST00000152364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022664	Slc35a5	ENSMUST00000181177	ENSMUSP00000137789	TRANSLATION	protein_coding	-	-	3	152	0	0	0	0	6	-4,-2	-	-	0	MINOR
ENSMUSG00000022664	Slc35a5	ENSMUST00000023344	ENSMUSP00000023344	TRANSLATION	protein_coding	-	CCDS28193.1	1	437	0	0	1.5	176.4	19	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000022664	Slc35a5	ENSMUST00000180636	ENSMUSP00000137821	TRANSLATION	protein_coding	stop	-	5	233	0	0	0	81.1	12	-4,-2	-	-	-1	MINOR
ENSMUSG00000022667	Cd200r1	ENSMUST00000134625	ENSMUSP00000138076	TRANSLATION	nonsense_mediated_decay	-	-	1	245	6	2.75	0	76.8	0	2,-3	-	-	-1	MINOR
ENSMUSG00000022667	Cd200r1	ENSMUST00000231633	ENSMUSP00000155927	TRANSLATION	nonsense_mediated_decay	-	-	-	40	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000022667	Cd200r1	ENSMUST00000057488	ENSMUSP00000053822	TRANSLATION	protein_coding	-	CCDS28189.1	1	326	6	2.75	1.5	76.8	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000022941	Ripply3	ENSMUST00000023660	ENSMUSP00000023660	TRANSLATION	protein_coding	-	CCDS28347.1	1	152	0	0	0.5	108.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000232308	ENSMUSP00000155960	TRANSLATION	protein_coding	-	-	-	110	0	1.6	0	74.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000232278	ENSMUSP00000156187	TRANSLATION	protein_coding	-	-	-	73	0	1	0	74.9	0	-4,-5	-	-	9.75	MINOR
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000231936	ENSMUSP00000155950	TRANSLATION	protein_coding	-	-	-	72	0	1.6	0	74.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000113729	ENSMUSP00000109358	TRANSLATION	protein_coding	start	-	5	63	0	1.6	1.5	74.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000231913	ENSMUSP00000156259	TRANSLATION	protein_coding	-	-	-	72	0	1.6	0	74.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000183578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000232387	ENSMUSP00000156366	TRANSLATION	protein_coding	-	-	-	72	0	1.6	0	74.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000080717	B230307C23Rik	ENSMUST00000122450	ENSMUSP00000113241	TRANSLATION	protein_coding	-	-	1	64	0	1.6	1.5	74.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000071669	Snx29	ENSMUST00000150993	ENSMUSP00000117896	TRANSLATION	protein_coding	start	-	1	249	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071669	Snx29	ENSMUST00000180792	ENSMUSP00000138025	TRANSLATION	protein_coding	-	CCDS27963.2	5	818	0	3.01	1.5	155.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071669	Snx29	ENSMUST00000096273	ENSMUSP00000093993	TRANSLATION	protein_coding	-	CCDS79422.1	1	476	0	2.05	0.5	68.2	0	-4,-5	-	-	4.86	MINOR
ENSMUSG00000071669	Snx29	ENSMUST00000151478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071669	Snx29	ENSMUST00000134941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071669	Snx29	ENSMUST00000115814	ENSMUSP00000111481	TRANSLATION	protein_coding	-	-	5	374	0	0.96	0	87	0	-4,-7	-	-	3.81	MINOR
ENSMUSG00000071669	Snx29	ENSMUST00000122168	ENSMUSP00000113595	TRANSLATION	protein_coding	-	-	5	350	0	0.45	0	0	0	-1,1	-	-	0.882	MINOR
ENSMUSG00000022706	Mrpl40	ENSMUST00000023391	ENSMUSP00000023391	TRANSLATION	protein_coding	-	CCDS28030.1	1	206	0	3.15	1.5	210.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000022706	Mrpl40	ENSMUST00000119273	ENSMUSP00000113065	TRANSLATION	protein_coding	-	-	3	162	0	2	2.4	210.7	0	-4,-5	-	-	9.702	MINOR
ENSMUSG00000022706	Mrpl40	ENSMUST00000232123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075269	Bex6	ENSMUST00000099990	ENSMUSP00000097570	TRANSLATION	protein_coding	-	CCDS28116.1	-	114	0	0	0.5	44	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075269	Bex6	ENSMUST00000231512	ENSMUSP00000156069	TRANSLATION	protein_coding	-	CCDS28116.1	-	114	0	0	0.5	44	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000075269	Bex6	ENSMUST00000231941	ENSMUSP00000156333	TRANSLATION	protein_coding	-	CCDS28116.1	-	114	0	0	0.5	44	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000105547	Iglc3	ENSMUST00000200235	ENSMUSP00000143661	TRANSLATION	IG_C_gene	start	-	-	105	0	1	0	96.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000044442	N6amt1	ENSMUST00000118115	ENSMUSP00000113217	TRANSLATION	protein_coding	-	-	1	181	19	1.485	0	0	0	-4,-7	-	-	10.308	MINOR
ENSMUSG00000044442	N6amt1	ENSMUST00000120284	ENSMUSP00000112510	TRANSLATION	protein_coding	-	-	1	150	19	1.305	0	0	0	-4,-7	-	-	9.786	MINOR
ENSMUSG00000044442	N6amt1	ENSMUST00000054442	ENSMUSP00000061835	TRANSLATION	protein_coding	-	CCDS28289.1	1	214	19	2.067	7.1	0	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000044442	N6amt1	ENSMUST00000118310	ENSMUSP00000113229	TRANSLATION	protein_coding	-	CCDS49889.1	1	138	19	1.305	0.5	0	0	-4,-7	-	-	9.786	MINOR
ENSMUSG00000060166	Zdhhc8	ENSMUST00000076957	ENSMUSP00000076224	TRANSLATION	protein_coding	-	CCDS28017.1	1	762	0	0	6.3	119.6	0	-2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000060166	Zdhhc8	ENSMUST00000231412	ENSMUSP00000156093	TRANSLATION	protein_coding	start/stop	-	-	218	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022781	Pak2	ENSMUST00000125019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022781	Pak2	ENSMUST00000023467	ENSMUSP00000023467	TRANSLATION	protein_coding	-	CCDS28112.1	1	524	18	9.658	10.8	331.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000116652	B830017H08Rik	ENSMUST00000231909	ENSMUSP00000157384	TRANSLATION	protein_coding	-	-	-	190	2	0	0	0	0	-4,-2	-	-	2	ALTERNATIVE:2
ENSMUSG00000116652	B830017H08Rik	ENSMUST00000235474	ENSMUSP00000157543	TRANSLATION	protein_coding	-	-	-	232	2	0	0	0	0	-4,-2	-	-	2	PRINCIPAL:5
ENSMUSG00000039457	Ppl	ENSMUST00000035672	ENSMUSP00000039360	TRANSLATION	protein_coding	-	CCDS27932.1	1	1754	0	8.67	2.7	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039457	Ppl	ENSMUST00000230554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041378	Cldn5	ENSMUST00000043577	ENSMUSP00000041925	TRANSLATION	protein_coding	-	CCDS28026.1	-	218	0	1	5.9	100.1	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000052516	Robo2	ENSMUST00000227347	ENSMUSP00000154010	TRANSLATION	protein_coding	stop	-	-	1065	0	14.65	0	424.7	2	1,-2	-	-	-1	MINOR
ENSMUSG00000052516	Robo2	ENSMUST00000138852	ENSMUSP00000156330	TRANSLATION	protein_coding	start	-	3	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052516	Robo2	ENSMUST00000147408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052516	Robo2	ENSMUST00000231426	ENSMUSP00000156156	TRANSLATION	protein_coding	start/stop	-	-	219	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052516	Robo2	ENSMUST00000226478	ENSMUSP00000154353	TRANSLATION	protein_coding	-	-	-	1512	0	14.65	1.7	424.7	2	1,-2	-	-	12.226	ALTERNATIVE:2
ENSMUSG00000052516	Robo2	ENSMUST00000117200	ENSMUSP00000113795	TRANSLATION	protein_coding	-	-	5	1377	0	14.65	4.1	424.7	2	1,-2	-	-	13	ALTERNATIVE:2
ENSMUSG00000052516	Robo2	ENSMUST00000149114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052516	Robo2	ENSMUST00000117785	ENSMUSP00000112776	TRANSLATION	protein_coding	-	CCDS49886.1	1	1508	0	14.65	0.5	424.7	2	1,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000052516	Robo2	ENSMUST00000156010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052516	Robo2	ENSMUST00000116586	ENSMUSP00000112285	TRANSLATION	protein_coding	start	-	5	207	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052516	Robo2	ENSMUST00000140062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052516	Robo2	ENSMUST00000231889	ENSMUSP00000155911	TRANSLATION	protein_coding	start	-	-	793	0	3.4	0	44.1	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052516	Robo2	ENSMUST00000137420	ENSMUSP00000155941	TRANSLATION	protein_coding	start/stop	-	2	178	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022755	Adgrg7	ENSMUST00000023437	ENSMUSP00000023437	TRANSLATION	protein_coding	-	CCDS28225.1	1	785	0	0.84	0.5	169.2	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034379	Wdr5b	ENSMUST00000042203	ENSMUSP00000040852	TRANSLATION	protein_coding	-	CCDS28145.1	-	328	0	1	1.5	205.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000039200	Atf7ip2	ENSMUST00000100191	ENSMUSP00000097766	TRANSLATION	protein_coding	-	-	1	225	0	0	0	178	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039200	Atf7ip2	ENSMUST00000119023	ENSMUSP00000113480	TRANSLATION	protein_coding	-	CCDS49759.1	1	300	0	0	0.5	243.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039200	Atf7ip2	ENSMUST00000133674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039200	Atf7ip2	ENSMUST00000044005	ENSMUSP00000036731	TRANSLATION	protein_coding	-	CCDS49758.1	1	452	0	0	1.5	362.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039200	Atf7ip2	ENSMUST00000230872	ENSMUSP00000155077	TRANSLATION	protein_coding	start	-	-	133	0	0	0	47.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039200	Atf7ip2	ENSMUST00000117220	ENSMUSP00000113573	TRANSLATION	protein_coding	-	-	1	319	0	0	0.5	243.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022684	Bfar	ENSMUST00000023365	ENSMUSP00000023365	TRANSLATION	protein_coding	-	CCDS27966.1	1	450	8	3.14	1.5	72	2	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022684	Bfar	ENSMUST00000132349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022684	Bfar	ENSMUST00000144804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022684	Bfar	ENSMUST00000069281	ENSMUSP00000063371	TRANSLATION	protein_coding	-	CCDS49769.1	1	325	8	2.14	0.5	35.8	2	-4,-5	-	-	12.984	MINOR
ENSMUSG00000022684	Bfar	ENSMUST00000148079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022684	Bfar	ENSMUST00000154568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022684	Bfar	ENSMUST00000230905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022684	Bfar	ENSMUST00000127973	ENSMUSP00000115585	TRANSLATION	nonsense_mediated_decay	-	-	1	176	8	0.64	0	35.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000022792	Yars2	ENSMUST00000159962	ENSMUSP00000125252	TRANSLATION	protein_coding	-	-	2	349	20	3.11	0	203.4	0	-1,3	-	-	11.238	MINOR
ENSMUSG00000022792	Yars2	ENSMUST00000161191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022792	Yars2	ENSMUST00000159683	ENSMUSP00000124606	TRANSLATION	nonsense_mediated_decay	-	-	1	349	20	3.11	0	203.4	0	-1,3	-	-	-1	MINOR
ENSMUSG00000022792	Yars2	ENSMUST00000059955	ENSMUSP00000055277	TRANSLATION	protein_coding	-	CCDS27983.1	1	472	20	5.27	1.5	244.1	0	-1,3	-	-	18	PRINCIPAL:1
ENSMUSG00000022792	Yars2	ENSMUST00000162734	ENSMUSP00000125496	TRANSLATION	protein_coding	start/stop	-	5	125	0	1.68	0	24.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022792	Yars2	ENSMUST00000159583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068196	Col8a1	ENSMUST00000232382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068196	Col8a1	ENSMUST00000089332	ENSMUSP00000086745	TRANSLATION	protein_coding	-	CCDS37367.1	1	744	3	0.6	6.3	192.4	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000022848	Slc49a4	ENSMUST00000149892	ENSMUSP00000120775	TRANSLATION	nonsense_mediated_decay	-	-	5	115	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000022848	Slc49a4	ENSMUST00000023554	ENSMUSP00000023554	TRANSLATION	protein_coding	-	CCDS28141.1	1	478	0	0	6.3	0	11	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000039956	Mrap	ENSMUST00000038197	ENSMUSP00000043890	TRANSLATION	protein_coding	-	CCDS28317.1	1	127	0	0	1.5	149.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000039956	Mrap	ENSMUST00000138984	ENSMUSP00000156282	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	50.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039956	Mrap	ENSMUST00000125429	ENSMUSP00000156354	TRANSLATION	nonsense_mediated_decay	-	-	3	36	0	0	0	51	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039956	Mrap	ENSMUST00000133973	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022877	Hrg	ENSMUST00000023590	ENSMUSP00000023590	TRANSLATION	protein_coding	-	CCDS49800.1	1	536	0	2.6	0.5	0	0	2,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022877	Hrg	ENSMUST00000232422	ENSMUSP00000155962	TRANSLATION	protein_coding	-	-	-	199	0	1	0	0	0	2,-1	-	-	2.31	MINOR
ENSMUSG00000009569	Mrtfb	ENSMUST00000115809	ENSMUSP00000111476	TRANSLATION	protein_coding	-	CCDS37257.1	2	102	0	0.2	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000009569	Mrtfb	ENSMUST00000149359	ENSMUSP00000122815	TRANSLATION	protein_coding	-	CCDS37258.1	1	1080	0	3.6	0.5	107.6	0	-4,-5	-	-	11.598	PRINCIPAL:3
ENSMUSG00000009569	Mrtfb	ENSMUST00000056715	ENSMUSP00000054993	TRANSLATION	protein_coding	-	CCDS37257.1	1	102	0	0.2	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000009569	Mrtfb	ENSMUST00000009713	ENSMUSP00000009713	TRANSLATION	protein_coding	-	CCDS49768.1	5	1091	0	3.8	0.5	107.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022895	Ets2	ENSMUST00000233578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022895	Ets2	ENSMUST00000233499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022895	Ets2	ENSMUST00000233550	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022895	Ets2	ENSMUST00000232792	ENSMUSP00000156757	TRANSLATION	protein_coding	stop	-	-	282	0	2	0	112.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022895	Ets2	ENSMUST00000023612	ENSMUSP00000023612	TRANSLATION	protein_coding	-	CCDS37412.1	1	468	0	5	6.3	237.1	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000022895	Ets2	ENSMUST00000233908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022525	Plaat1	ENSMUST00000161294	ENSMUSP00000124252	TRANSLATION	nonsense_mediated_decay	-	-	3	50	0	1	0	41.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022525	Plaat1	ENSMUST00000160794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022525	Plaat1	ENSMUST00000089824	ENSMUSP00000087257	TRANSLATION	protein_coding	-	CCDS28094.1	1	167	0	2	7.1	126.6	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022525	Plaat1	ENSMUST00000162747	ENSMUSP00000123809	TRANSLATION	protein_coding	-	CCDS28094.1	1	167	0	2	7.1	126.6	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060459	Kng2	ENSMUST00000232459	ENSMUSP00000156311	TRANSLATION	protein_coding	stop	-	-	159	0	0	0	99.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060459	Kng2	ENSMUST00000100046	ENSMUSP00000097623	TRANSLATION	protein_coding	-	CCDS28072.1	1	644	0	1.88	0.5	226.6	0	3,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000060459	Kng2	ENSMUST00000160243	ENSMUSP00000124161	TRANSLATION	nonsense_mediated_decay	-	-	2	177	0	0	0	61	0	3,-1	-	-	-1	MINOR
ENSMUSG00000060459	Kng2	ENSMUST00000231872	ENSMUSP00000155884	TRANSLATION	protein_coding	start	-	-	137	0	1.08	0	36.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060459	Kng2	ENSMUST00000039338	ENSMUSP00000046867	TRANSLATION	protein_coding	-	CCDS49802.1	1	462	0	1.88	0.5	226.6	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000060459	Kng2	ENSMUST00000115349	ENSMUSP00000111006	TRANSLATION	protein_coding	-	CCDS49801.1	1	433	0	1.88	1.5	226.6	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000060459	Kng2	ENSMUST00000231835	ENSMUSP00000156074	TRANSLATION	nonsense_mediated_decay	-	-	-	46	0	0	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058550	Dppa4	ENSMUST00000096045	ENSMUSP00000093749	TRANSLATION	protein_coding	-	CCDS28209.1	1	296	2	0	1.5	156.8	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000058550	Dppa4	ENSMUST00000050705	ENSMUSP00000093748	TRANSLATION	protein_coding	-	CCDS28208.1	5	244	2	0	1.5	156.8	0	-4,-5	-	-	8	ALTERNATIVE:2
ENSMUSG00000058550	Dppa4	ENSMUST00000231359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033618	Map3k13	ENSMUST00000042065	ENSMUSP00000047388	TRANSLATION	protein_coding	-	CCDS37294.1	1	959	18	6	0.5	217.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033618	Map3k13	ENSMUST00000231988	ENSMUSP00000156075	TRANSLATION	protein_coding	-	CCDS37294.1	-	959	18	6	0.5	217.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033618	Map3k13	ENSMUST00000232240	ENSMUSP00000156202	TRANSLATION	protein_coding	-	CCDS37294.1	-	959	18	6	0.5	217.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045975	C2cd2	ENSMUST00000170757	ENSMUSP00000127368	TRANSLATION	protein_coding	-	CCDS28361.1	1	696	0	1.72	1.5	21.6	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000045975	C2cd2	ENSMUST00000232343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045975	C2cd2	ENSMUST00000231332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045975	C2cd2	ENSMUST00000232542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045975	C2cd2	ENSMUST00000232572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045975	C2cd2	ENSMUST00000231575	ENSMUSP00000156013	TRANSLATION	protein_coding	start/stop	-	-	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045975	C2cd2	ENSMUST00000232063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045975	C2cd2	ENSMUST00000232165	ENSMUSP00000156005	TRANSLATION	protein_coding,RT	stop	-	-	148	0	0.68	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045975	C2cd2	ENSMUST00000231903	ENSMUSP00000156211	TRANSLATION	protein_coding	start/stop	-	-	225	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045975	C2cd2	ENSMUST00000231953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022529	Zfp263	ENSMUST00000023176	ENSMUSP00000023176	TRANSLATION	protein_coding	-	CCDS27909.1	1	680	36	1.42	1.5	376.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022529	Zfp263	ENSMUST00000159469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022529	Zfp263	ENSMUST00000159060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022529	Zfp263	ENSMUST00000160923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022529	Zfp263	ENSMUST00000159425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022529	Zfp263	ENSMUST00000161630	ENSMUSP00000123725	TRANSLATION	nonsense_mediated_decay	-	-	5	196	0	1	0	132.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022529	Zfp263	ENSMUST00000162207	ENSMUSP00000124433	TRANSLATION	protein_coding	-	-	1	392	36	0.42	0	218.1	0	-4,-5	-	-	7.776	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000231863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022962	Gart	ENSMUST00000156713	ENSMUSP00000119272	TRANSLATION	nonsense_mediated_decay	-	-	5	306	22	7.75	0	430.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000232643	ENSMUSP00000156130	TRANSLATION	protein_coding	start	-	-	82	10	2.08	0	108.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000232620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022962	Gart	ENSMUST00000231380	ENSMUSP00000156232	TRANSLATION	protein_coding	-	-	-	433	22	9.83	1.2	529.2	0	-4,-2	-	-	0	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000232289	ENSMUSP00000156002	TRANSLATION	protein_coding	-	CCDS28329.1	-	1010	38	21.04	2.7	881	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022962	Gart	ENSMUST00000120450	ENSMUSP00000114034	TRANSLATION	protein_coding	-	-	1	433	22	9.83	1.2	529.2	0	-4,-2	-	-	0	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000231444	ENSMUSP00000155865	TRANSLATION	protein_coding	stop	-	-	64	1	1.5	0	64.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000232367	ENSMUSP00000156142	TRANSLATION	protein_coding	stop	-	-	199	16	4.75	0	251.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000023684	ENSMUSP00000023684	TRANSLATION	protein_coding	-	CCDS28329.1	1	1010	38	21.04	2.7	881	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000022962	Gart	ENSMUST00000232640	ENSMUSP00000155957	TRANSLATION	protein_coding	start	-	-	99	2	1.585	0	59.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022962	Gart	ENSMUST00000231775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022962	Gart	ENSMUST00000231702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000153292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000145112	ENSMUSP00000117026	TRANSLATION	protein_coding	start/stop	-	5	281	18	4.37	0	91.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022721	Trmt2a	ENSMUST00000115640	ENSMUSP00000111304	TRANSLATION	protein_coding	-	CCDS37281.1	1	613	18	4.555	0.5	95	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000022721	Trmt2a	ENSMUST00000128045	ENSMUSP00000133226	TRANSLATION	protein_coding	start	-	5	70	0	1.29	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022721	Trmt2a	ENSMUST00000147273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000232293	ENSMUSP00000155985	TRANSLATION	protein_coding	start	-	-	76	10	1.798	0	32.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022721	Trmt2a	ENSMUST00000232342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000059696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000127239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000232015	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000131211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022721	Trmt2a	ENSMUST00000140206	ENSMUSP00000121216	TRANSLATION	protein_coding	-	CCDS57020.1	1	574	11	3.995	0.5	29.8	0	-4,-5	-	-	8.094	MINOR
ENSMUSG00000022721	Trmt2a	ENSMUST00000231509	ENSMUSP00000156227	TRANSLATION	protein_coding	start	-	-	74	0	0.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022721	Trmt2a	ENSMUST00000100099	ENSMUSP00000111303	TRANSLATION	protein_coding	-	CCDS37282.1	1	613	18	4.555	0.5	95	0	-4,-5	-	-	18	PRINCIPAL:5
ENSMUSG00000049362	Olfr173	ENSMUST00000049940	ENSMUSP00000052798	TRANSLATION	protein_coding	-	CCDS28236.1	-	321	0	0.24	1.5	173.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049362	Olfr173	ENSMUST00000206205	ENSMUSP00000145946	TRANSLATION	protein_coding	-	CCDS28236.1	2	321	0	0.24	1.5	173.4	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000039680	Mrps6	ENSMUST00000232222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039680	Mrps6	ENSMUST00000047429	ENSMUSP00000037631	TRANSLATION	protein_coding	-	CCDS28332.1	1	125	0	2.5	4.2	59.6	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000039680	Mrps6	ENSMUST00000138961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038015	Prm2	ENSMUST00000189593	ENSMUSP00000139898	TRANSLATION	protein_coding	-	CCDS27955.1	5	107	0	0	0.5	125.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000038015	Prm2	ENSMUST00000037996	ENSMUSP00000047925	TRANSLATION	protein_coding	-	CCDS27955.1	1	107	0	0	0.5	125.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050783	Htr1f	ENSMUST00000063076	ENSMUSP00000063136	TRANSLATION	protein_coding	-	CCDS28267.1	1	366	0	0.6	8.8	244.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000055540	Epha6	ENSMUST00000159383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055540	Epha6	ENSMUST00000161358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055540	Epha6	ENSMUST00000068860	ENSMUSP00000066734	TRANSLATION	protein_coding	-	CCDS28260.2	1	1130	19	11.73	1.5	793.2	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000055540	Epha6	ENSMUST00000162129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117081	Gm49948	ENSMUST00000113795	ENSMUSP00000109426	TRANSLATION	protein_coding,RT	-	-	1	298	0	1.5	0	25.1	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000090236	Car15	ENSMUST00000232529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090236	Car15	ENSMUST00000232516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090236	Car15	ENSMUST00000118960	ENSMUSP00000113400	TRANSLATION	protein_coding	-	CCDS49784.1	1	324	6	4.96	1.5	285.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000090236	Car15	ENSMUST00000231865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013089	Etv5	ENSMUST00000165506	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013089	Etv5	ENSMUST00000170803	ENSMUSP00000128338	TRANSLATION	nonsense_mediated_decay	start	-	5	89	0	0	0	92.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013089	Etv5	ENSMUST00000170393	ENSMUSP00000132210	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	186.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013089	Etv5	ENSMUST00000079601	ENSMUSP00000078551	TRANSLATION	protein_coding	-	CCDS37299.1	1	510	0	3	7.5	659.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000013089	Etv5	ENSMUST00000168774	ENSMUSP00000131791	TRANSLATION	protein_coding	-	-	1	528	0	3	0	610.1	0	-4,-5	-	-	9.042	MINOR
ENSMUSG00000009047	Gm5965	ENSMUST00000009191	ENSMUSP00000009191	TRANSLATION	protein_coding	stop	-	5	196	0	0	0.5	135.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000009047	Gm5965	ENSMUST00000238221	ENSMUSP00000158767	TRANSLATION	protein_coding	-	-	-	216	0	0	0	140.1	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000022658	Tagln3	ENSMUST00000096057	ENSMUSP00000093762	TRANSLATION	protein_coding	-	CCDS28200.1	1	199	0	3	17.3	124.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000022887	Masp1	ENSMUST00000230040	ENSMUSP00000155343	TRANSLATION	protein_coding	-	-	-	385	16	7.25	1.5	250.9	0	4,-1	-	-	2.664	MINOR
ENSMUSG00000022887	Masp1	ENSMUST00000089883	ENSMUSP00000087327	TRANSLATION	protein_coding	-	CCDS37303.1	1	704	21	14.25	1.5	549.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022887	Masp1	ENSMUST00000229619	ENSMUSP00000155665	TRANSLATION	protein_coding	-	-	-	733	20	9.5	1.5	474.6	0	4,-1	-	-	6.846	MINOR
ENSMUSG00000022887	Masp1	ENSMUST00000229152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062609	Kcnj15	ENSMUST00000138329	ENSMUSP00000117744	TRANSLATION	protein_coding	stop	-	2	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000113858	ENSMUSP00000109489	TRANSLATION	protein_coding	-	CCDS37410.1	5	375	0	2.214	7.5	456.1	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000062609	Kcnj15	ENSMUST00000134166	ENSMUSP00000118992	TRANSLATION	protein_coding	stop	-	3	173	0	1.414	0	172.2	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000113855	ENSMUSP00000109486	TRANSLATION	protein_coding	-	CCDS37410.1	1	375	0	2.214	7.5	456.1	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000062609	Kcnj15	ENSMUST00000113854	ENSMUSP00000109485	TRANSLATION	protein_coding	-	CCDS37410.1	1	375	0	2.214	7.5	456.1	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000062609	Kcnj15	ENSMUST00000113856	ENSMUSP00000109487	TRANSLATION	protein_coding	-	CCDS37410.1	3	375	0	2.214	7.5	456.1	5	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000062609	Kcnj15	ENSMUST00000113862	ENSMUSP00000109493	TRANSLATION	protein_coding	-	CCDS28351.1	1	402	0	2.214	1.5	456.1	5	-4,-5	-	-	12.231	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000125847	ENSMUSP00000114646	TRANSLATION	protein_coding	stop	-	3	34	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000113859	ENSMUSP00000109490	TRANSLATION	protein_coding	-	CCDS28351.1	1	402	0	2.214	1.5	456.1	5	-4,-5	-	-	12.231	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000152516	ENSMUSP00000155871	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000140222	ENSMUSP00000114449	TRANSLATION	protein_coding	stop	-	5	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000037154	ENSMUSP00000045218	TRANSLATION	protein_coding	-	CCDS28351.1	1	402	0	2.214	1.5	456.1	5	-4,-5	-	-	12.231	MINOR
ENSMUSG00000062609	Kcnj15	ENSMUST00000113861	ENSMUSP00000109492	TRANSLATION	protein_coding	-	CCDS28351.1	1	402	0	2.214	1.5	456.1	5	-4,-5	-	-	12.231	MINOR
ENSMUSG00000082815	Gm5678	ENSMUST00000120115	ENSMUSP00000147517	TRANSLATION	protein_coding	-	-	5	277	28	3	8.8	89	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000039763	Dnajc28	ENSMUST00000133731	ENSMUSP00000118526	TRANSLATION	protein_coding	stop	-	3	84	0	0.48	0	33	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000039763	Dnajc28	ENSMUST00000169982	ENSMUSP00000132288	TRANSLATION	protein_coding	-	CCDS49912.1	2	409	0	0.8	0.5	120.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039763	Dnajc28	ENSMUST00000049244	ENSMUSP00000048113	TRANSLATION	protein_coding	-	CCDS49911.1	1	385	0	0.8	1.5	120.9	0	-4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000039763	Dnajc28	ENSMUST00000143058	ENSMUSP00000120318	TRANSLATION	protein_coding	stop	-	2	196	0	0.8	0	46.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022772	Senp5	ENSMUST00000144320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022772	Senp5	ENSMUST00000023457	ENSMUSP00000023457	TRANSLATION	protein_coding	-	CCDS28111.1	1	749	5	4.13	0.5	145	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022772	Senp5	ENSMUST00000155515	ENSMUSP00000117481	TRANSLATION	nonsense_mediated_decay	start	-	3	210	1	1.616	0	27.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022772	Senp5	ENSMUST00000231360	ENSMUSP00000156109	TRANSLATION	protein_coding	-	CCDS28111.1	-	749	5	4.13	0.5	145	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022772	Senp5	ENSMUST00000129900	ENSMUSP00000115257	TRANSLATION	protein_coding	start	-	1	607	1	1.55	0	26.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000035356	Nfkbiz	ENSMUST00000096026	ENSMUSP00000093726	TRANSLATION	protein_coding	-	CCDS49869.1	1	629	0	4.545	0.5	99.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000035356	Nfkbiz	ENSMUST00000231463	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035356	Nfkbiz	ENSMUST00000036273	ENSMUSP00000041173	TRANSLATION	protein_coding	-	CCDS28216.1	1	728	0	4.545	0.5	99.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035356	Nfkbiz	ENSMUST00000139373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035356	Nfkbiz	ENSMUST00000114458	ENSMUSP00000110102	TRANSLATION	protein_coding	-	CCDS28216.1	1	728	0	4.545	0.5	99.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000035356	Nfkbiz	ENSMUST00000114457	ENSMUSP00000110101	TRANSLATION	protein_coding	-	CCDS49869.1	1	629	0	4.545	0.5	99.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025616	Usp16	ENSMUST00000144886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025616	Usp16	ENSMUST00000131356	ENSMUSP00000122384	TRANSLATION	protein_coding	stop	-	3	48	2	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025616	Usp16	ENSMUST00000131206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025616	Usp16	ENSMUST00000144759	ENSMUSP00000116323	TRANSLATION	nonsense_mediated_decay	-	-	5	334	12	6	0	154.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025616	Usp16	ENSMUST00000177538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025616	Usp16	ENSMUST00000146386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025616	Usp16	ENSMUST00000177275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025616	Usp16	ENSMUST00000026710	ENSMUSP00000026710	TRANSLATION	protein_coding	-	CCDS28291.1	1	825	16	9.475	1.5	252.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025616	Usp16	ENSMUST00000119504	ENSMUSP00000114058	TRANSLATION	protein_coding	-	-	5	754	16	8.69	0	188.8	0	-4,-6	-	-	12.624	MINOR
ENSMUSG00000025616	Usp16	ENSMUST00000149656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025616	Usp16	ENSMUST00000135399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022759	Lrrc74b	ENSMUST00000100123	ENSMUSP00000097699	TRANSLATION	protein_coding	-	CCDS28006.2	1	391	0	5.43	0.5	117.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022759	Lrrc74b	ENSMUST00000232230	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022759	Lrrc74b	ENSMUST00000232637	ENSMUSP00000155867	TRANSLATION	protein_coding	-	-	-	310	0	4.51	0	105.5	0	-4,-5	-	-	9.462	MINOR
ENSMUSG00000022759	Lrrc74b	ENSMUST00000023442	ENSMUSP00000023442	TRANSLATION	protein_coding	-	CCDS49777.1	1	359	0	4.79	0.5	105.5	0	-4,-5	-	-	10.026	MINOR
ENSMUSG00000022820	Ndufb4	ENSMUST00000231881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022820	Ndufb4	ENSMUST00000135019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022820	Ndufb4	ENSMUST00000023514	ENSMUSP00000023514	TRANSLATION	protein_coding	-	CCDS28161.1	1	129	0	2.75	9.5	211.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000013539	Tango2	ENSMUST00000231543	ENSMUSP00000156081	TRANSLATION	protein_coding	stop	-	-	161	0	0	0	77.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000125287	ENSMUSP00000118806	TRANSLATION	protein_coding	stop	-	5	120	0	0	0	145	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000142677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000231605	ENSMUSP00000155896	TRANSLATION	protein_coding	-	-	-	177	0	0	0	111	0	-4,-5	-	-	0	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000145203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000145758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000150152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000134385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000115628	ENSMUSP00000111291	TRANSLATION	protein_coding	-	CCDS28019.1	1	276	0	0	5.1	251.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000013539	Tango2	ENSMUST00000231372	ENSMUSP00000156177	TRANSLATION	protein_coding	stop	-	-	126	0	0	0	114.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000232192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000128580	ENSMUSP00000121582	TRANSLATION	nonsense_mediated_decay	-	-	5	151	0	0	0	159.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000152684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000232558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013539	Tango2	ENSMUST00000130752	ENSMUSP00000121300	TRANSLATION	protein_coding	stop	-	2	117	0	0	0	137.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000013539	Tango2	ENSMUST00000231308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013539	Tango2	ENSMUST00000232073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013539	Tango2	ENSMUST00000231255	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013539	Tango2	ENSMUST00000232588	ENSMUSP00000156240	TRANSLATION	protein_coding	stop	-	-	189	0	0	0	198	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033355	Rtp4	ENSMUST00000038423	ENSMUSP00000041091	TRANSLATION	protein_coding	-	CCDS28079.1	1	249	5	0	0.5	90.8	1	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000033355	Rtp4	ENSMUST00000211569	ENSMUSP00000147666	TRANSLATION	protein_coding	stop	-	3	143	5	0	0	79.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033355	Rtp4	ENSMUST00000211349	ENSMUSP00000148086	TRANSLATION	protein_coding	-	-	3	61	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033355	Rtp4	ENSMUST00000210901	ENSMUSP00000147442	TRANSLATION	protein_coding	-	CCDS28079.1	5	249	5	0	0.5	90.8	1	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000033355	Rtp4	ENSMUST00000209422	ENSMUSP00000147521	TRANSLATION	protein_coding	-	CCDS28079.1	5	249	5	0	0.5	90.8	1	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000022809	Nr1i2	ENSMUST00000023504	ENSMUSP00000023504	TRANSLATION	protein_coding	-	CCDS28164.1	1	431	8	7.8	1.5	160.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044763	Trmt10c	ENSMUST00000059052	ENSMUSP00000058954	TRANSLATION	protein_coding	-	CCDS28220.1	1	414	0	0.2	1.5	150.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041974	Spidr	ENSMUST00000040248	ENSMUSP00000038820	TRANSLATION	protein_coding	-	CCDS27980.1	1	933	4	0	0.5	1161.6	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000041974	Spidr	ENSMUST00000229846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065968	Ifitm7	ENSMUST00000178021	ENSMUSP00000136512	TRANSLATION	protein_coding	-	-	-	107	0	0	1	99.5	2	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000065968	Ifitm7	ENSMUST00000230206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000065968	Ifitm7	ENSMUST00000117803	ENSMUSP00000113641	TRANSLATION	protein_coding	-	-	1	141	0	0	0.5	99.5	2	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000114219	ENSMUSP00000109857	TRANSLATION	protein_coding	-	CCDS28278.1	1	290	6	0	1.5	569.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000114220	ENSMUSP00000109858	TRANSLATION	protein_coding	-	CCDS28278.1	1	290	6	0	1.5	569.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000232528	ENSMUSP00000156192	TRANSLATION	protein_coding	-	-	-	214	6	0	0	423.2	0	-4,-5	-	-	6	MINOR
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000231272	ENSMUSP00000156262	TRANSLATION	protein_coding	stop	-	-	171	6	0	0	355.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000232329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000232052	ENSMUSP00000156198	TRANSLATION	protein_coding	-	CCDS28278.1	-	290	6	0	1.5	569.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000114218	ENSMUSP00000109856	TRANSLATION	protein_coding	-	CCDS28278.1	5	290	6	0	1.5	569.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022864	D16Ertd472e	ENSMUST00000231973	ENSMUSP00000156370	TRANSLATION	protein_coding	-	CCDS28278.1	-	290	6	0	1.5	569.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022768	Ccdc116	ENSMUST00000231597	ENSMUSP00000156186	TRANSLATION	protein_coding	stop	-	-	77	0	0	0	78.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022768	Ccdc116	ENSMUST00000232540	ENSMUSP00000156301	TRANSLATION	protein_coding	-	-	-	686	0	0	0.5	722.1	0	-4,-5	-	-	5.622	ALTERNATIVE:2
ENSMUSG00000022768	Ccdc116	ENSMUST00000023452	ENSMUSP00000023452	TRANSLATION	protein_coding	-	CCDS27995.1	1	541	0	0	1.5	728.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022768	Ccdc116	ENSMUST00000115711	ENSMUSP00000111376	TRANSLATION	protein_coding	-	CCDS27995.1	1	541	0	0	1.5	728.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022768	Ccdc116	ENSMUST00000232033	ENSMUSP00000155923	TRANSLATION	protein_coding	-	CCDS27995.1	-	541	0	0	1.5	728.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022803	Popdc2	ENSMUST00000146342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022803	Popdc2	ENSMUST00000141189	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022803	Popdc2	ENSMUST00000023494	ENSMUSP00000023494	TRANSLATION	protein_coding	-	CCDS37343.1	1	371	0	0	1.5	163.6	2	-4,-6	-	-	6	PRINCIPAL:4
ENSMUSG00000022803	Popdc2	ENSMUST00000114739	ENSMUSP00000110387	TRANSLATION	protein_coding	-	CCDS37342.1	1	367	0	0	0.5	163.6	2	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000022803	Popdc2	ENSMUST00000127892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000385	Tmprss2	ENSMUST00000231544	ENSMUSP00000156007	TRANSLATION	nonsense_mediated_decay	start	-	-	96	5	0.4	0	87	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000385	Tmprss2	ENSMUST00000232599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000385	Tmprss2	ENSMUST00000000395	ENSMUSP00000000395	TRANSLATION	protein_coding	-	CCDS37417.1	1	490	15	5.75	1.5	363.7	1	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000385	Tmprss2	ENSMUST00000231715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000385	Tmprss2	ENSMUST00000231908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000385	Tmprss2	ENSMUST00000232141	ENSMUSP00000156304	TRANSLATION	protein_coding	stop	-	-	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057174	Krtap19-9b	ENSMUST00000077715	ENSMUSP00000076896	TRANSLATION	protein_coding	-	CCDS49896.1	-	58	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000047854	Stx19	ENSMUST00000055557	ENSMUSP00000055901	TRANSLATION	protein_coding	-	CCDS28262.1	1	292	0	0.6	3.9	192.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022833	Ccdc14	ENSMUST00000231364	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022833	Ccdc14	ENSMUST00000231609	ENSMUSP00000156124	TRANSLATION	protein_coding	-	-	-	886	0	0	0	1297	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000022833	Ccdc14	ENSMUST00000232489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022833	Ccdc14	ENSMUST00000023532	ENSMUSP00000023532	TRANSLATION	protein_coding	-	CCDS49837.1	1	934	0	0	0.5	1297	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022833	Ccdc14	ENSMUST00000232341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022533	Atp13a3	ENSMUST00000153656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022533	Atp13a3	ENSMUST00000136065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022533	Atp13a3	ENSMUST00000229503	ENSMUSP00000155615	TRANSLATION	protein_coding	start	-	-	259	0	1.09	0	0	7	0,-3	-	-	-1	MINOR
ENSMUSG00000022533	Atp13a3	ENSMUST00000229750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022533	Atp13a3	ENSMUST00000229616	ENSMUSP00000154990	TRANSLATION	protein_coding	stop	-	-	74	0	0	0	85.7	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000022533	Atp13a3	ENSMUST00000061350	ENSMUSP00000051645	TRANSLATION	protein_coding	-	CCDS49820.1	5	1219	6	10.187	0.5	320.4	15	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000022533	Atp13a3	ENSMUST00000149882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022533	Atp13a3	ENSMUST00000100013	ENSMUSP00000128224	TRANSLATION	protein_coding	-	CCDS49821.1	5	1249	6	10.187	0.5	320.4	16	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000004842	Pou1f1	ENSMUST00000175882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004842	Pou1f1	ENSMUST00000176038	ENSMUSP00000135574	TRANSLATION	protein_coding	-	-	5	317	0	3.35	5.8	182.4	0	-4,-6	-	-	14.214	ALTERNATIVE:1
ENSMUSG00000004842	Pou1f1	ENSMUST00000004964	ENSMUSP00000004964	TRANSLATION	protein_coding	-	-	5	317	0	3.35	5.8	182.4	0	-4,-6	-	-	14.214	ALTERNATIVE:1
ENSMUSG00000004842	Pou1f1	ENSMUST00000184525	ENSMUSP00000139087	TRANSLATION	protein_coding	-	-	1	289	0	3.35	0	182.4	0	-4,-7	-	-	12	MINOR
ENSMUSG00000004842	Pou1f1	ENSMUST00000176330	ENSMUSP00000135113	TRANSLATION	protein_coding	-	CCDS57033.1	1	291	0	3.35	7.5	182.4	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000000884	Gnb1l	ENSMUST00000139625	ENSMUSP00000120897	TRANSLATION	protein_coding	stop	-	5	75	0	1.14	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000884	Gnb1l	ENSMUST00000147739	ENSMUSP00000123200	TRANSLATION	protein_coding	stop	-	3	122	0	2.08	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000884	Gnb1l	ENSMUST00000151253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000884	Gnb1l	ENSMUST00000149035	ENSMUSP00000114875	TRANSLATION	protein_coding	stop	-	5	78	0	1.47	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000884	Gnb1l	ENSMUST00000000904	ENSMUSP00000000904	TRANSLATION	nonsense_mediated_decay	-	-	5	151	0	1.72	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000884	Gnb1l	ENSMUST00000231621	ENSMUSP00000156162	TRANSLATION	protein_coding	-	CCDS28022.1	-	326	0	5.31	1.5	22.7	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000000884	Gnb1l	ENSMUST00000115600	ENSMUSP00000111263	TRANSLATION	nonsense_mediated_decay	-	-	1	198	0	3.37	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000000884	Gnb1l	ENSMUST00000232235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000884	Gnb1l	ENSMUST00000129952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000884	Gnb1l	ENSMUST00000167778	ENSMUSP00000130371	TRANSLATION	protein_coding	-	-	1	357	0	5.05	0.5	22.7	0	-4,-2	-	-	11.478	ALTERNATIVE:2
ENSMUSG00000000884	Gnb1l	ENSMUST00000124924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000884	Gnb1l	ENSMUST00000090086	ENSMUSP00000087544	TRANSLATION	protein_coding	-	CCDS28022.1	1	326	0	5.31	1.5	22.7	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000000884	Gnb1l	ENSMUST00000115601	ENSMUSP00000111264	TRANSLATION	protein_coding	-	CCDS70695.1	1	312	0	4.65	0.5	22.7	0	-4,-2	-	-	10.68	MINOR
ENSMUSG00000050158	Olfr165	ENSMUST00000206110	ENSMUSP00000145668	TRANSLATION	protein_coding	-	-	3	312	0	0.36	6.3	162.2	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000050158	Olfr165	ENSMUST00000206410	ENSMUSP00000146100	TRANSLATION	protein_coding	-	CCDS28033.1	-	313	0	0.36	6.3	162.2	7	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000050158	Olfr165	ENSMUST00000052516	ENSMUSP00000062079	TRANSLATION	protein_coding	-	-	-	312	0	0.36	6.3	162.2	7	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000022671	Mzt2	ENSMUST00000023351	ENSMUSP00000023351	TRANSLATION	protein_coding	-	CCDS27979.1	1	159	0	0	0.5	137	0	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000022671	Mzt2	ENSMUST00000137864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022671	Mzt2	ENSMUST00000117136	ENSMUSP00000113832	TRANSLATION	protein_coding	-	CCDS27979.1	1	159	0	0	0.5	137	0	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000022671	Mzt2	ENSMUST00000229680	ENSMUSP00000155739	TRANSLATION	protein_coding	-	-	-	152	0	0	0	137	0	-1,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000052276	Ostn	ENSMUST00000066852	ENSMUSP00000067539	TRANSLATION	protein_coding	-	CCDS28090.1	1	130	0	0	5.1	216.7	0	2,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000033653	Vps8	ENSMUST00000118138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033653	Vps8	ENSMUST00000117598	ENSMUSP00000112937	TRANSLATION	protein_coding	-	CCDS70701.1	1	1427	8	0	6.3	196.4	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000033653	Vps8	ENSMUST00000115397	ENSMUSP00000111055	TRANSLATION	protein_coding	-	-	5	1429	8	0	6.3	196.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000033653	Vps8	ENSMUST00000232357	ENSMUSP00000156131	TRANSLATION	nonsense_mediated_decay	start	-	-	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000139473	ENSMUSP00000119311	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000127903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033653	Vps8	ENSMUST00000125487	ENSMUSP00000114719	TRANSLATION	protein_coding	start	-	1	964	8	0	0	196.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000096191	ENSMUSP00000093905	TRANSLATION	protein_coding	-	-	1	1292	2	0	0	196.4	0	-4,-5	-	-	7.5	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000231224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033653	Vps8	ENSMUST00000232132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033653	Vps8	ENSMUST00000118923	ENSMUSP00000112636	TRANSLATION	protein_coding	-	CCDS70700.1	5	1399	8	0	0.5	196.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000156580	ENSMUSP00000114139	TRANSLATION	nonsense_mediated_decay	start	-	2	75	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000134650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033653	Vps8	ENSMUST00000096192	ENSMUSP00000093906	TRANSLATION	protein_coding	-	-	5	1399	8	0	0.5	196.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000033653	Vps8	ENSMUST00000231484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033653	Vps8	ENSMUST00000150765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040666	Sh3bgr	ENSMUST00000129904	ENSMUSP00000116740	TRANSLATION	protein_coding	stop	-	3	180	0	2.08	0	134	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040666	Sh3bgr	ENSMUST00000132424	ENSMUSP00000120614	TRANSLATION	protein_coding	start	-	5	151	0	2.61	0	140.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040666	Sh3bgr	ENSMUST00000233945	ENSMUSP00000156748	TRANSLATION	protein_coding	-	-	-	299	0	2.74	0	158.7	0	-4,-7	-	-	11.592	ALTERNATIVE:2
ENSMUSG00000040666	Sh3bgr	ENSMUST00000233577	ENSMUSP00000156558	TRANSLATION	protein_coding	start	-	-	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040666	Sh3bgr	ENSMUST00000171181	ENSMUSP00000126581	TRANSLATION	protein_coding	-	CCDS28355.1	1	214	0	2.94	0.5	158.7	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000040666	Sh3bgr	ENSMUST00000048770	ENSMUSP00000038110	TRANSLATION	protein_coding	-	CCDS28355.1	1	214	0	2.94	0.5	158.7	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000040666	Sh3bgr	ENSMUST00000233818	ENSMUSP00000156453	TRANSLATION	protein_coding	-	-	-	130	0	2.74	0	158.7	0	-4,-7	-	-	11.592	ALTERNATIVE:2
ENSMUSG00000040666	Sh3bgr	ENSMUST00000157060	ENSMUSP00000116607	TRANSLATION	protein_coding	start	-	5	95	0	0.53	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040666	Sh3bgr	ENSMUST00000166952	ENSMUSP00000129010	TRANSLATION	protein_coding	stop	-	5	135	0	2.74	0	158.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040666	Sh3bgr	ENSMUST00000145069	ENSMUSP00000116241	TRANSLATION	protein_coding	start	-	5	105	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003527	Ess2	ENSMUST00000003621	ENSMUSP00000003621	TRANSLATION	protein_coding	-	CCDS28013.1	1	480	0	0	5.1	248.9	0	-3,0	-	-	8	PRINCIPAL:2
ENSMUSG00000003527	Ess2	ENSMUST00000232423	ENSMUSP00000156085	TRANSLATION	protein_coding	-	-	-	479	0	0	3.9	247.8	0	-3,0	-	-	7.348	ALTERNATIVE:2
ENSMUSG00000003527	Ess2	ENSMUST00000232366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003527	Ess2	ENSMUST00000231921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003527	Ess2	ENSMUST00000232111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022682	Rrn3	ENSMUST00000023363	ENSMUSP00000023363	TRANSLATION	protein_coding	-	CCDS27968.1	1	656	0	5.555	1.5	451.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022682	Rrn3	ENSMUST00000230102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022780	Meltf	ENSMUST00000023464	ENSMUSP00000023464	TRANSLATION	protein_coding	-	CCDS28108.1	1	738	18	11.04	0.5	785.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000068167	Csnka2ip	ENSMUST00000209382	ENSMUSP00000147880	TRANSLATION	protein_coding	-	-	5	720	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000068167	Csnka2ip	ENSMUST00000089279	ENSMUSP00000086692	TRANSLATION	protein_coding	-	CCDS37374.1	-	276	0	0	0.5	0	0	-3,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000030775	Trat1	ENSMUST00000170861	ENSMUSP00000129808	TRANSLATION	nonsense_mediated_decay	-	-	1	54	0	0	0	32.7	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000030775	Trat1	ENSMUST00000239408	ENSMUSP00000159369	TRANSLATION	protein_coding	-	CCDS37352.1	-	197	0	0	0.5	111.1	2	-3,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000030775	Trat1	ENSMUST00000231701	ENSMUSP00000155986	TRANSLATION	protein_coding	-	-	-	187	0	0	3.4	111.1	2	0,-4	-	-	7	ALTERNATIVE:2
ENSMUSG00000050742	Olfr164	ENSMUST00000216157	ENSMUSP00000149971	TRANSLATION	protein_coding	-	CCDS28032.1	5	315	0	0.36	2.7	166.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050742	Olfr164	ENSMUST00000056727	ENSMUSP00000056970	TRANSLATION	protein_coding	-	CCDS28032.1	-	315	0	0.36	2.7	166.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022674	Ube2v2	ENSMUST00000115776	ENSMUSP00000111442	TRANSLATION	protein_coding	-	CCDS49771.1	1	103	0	2.83	3	0	0	-4,-5	-	-	4.434	MINOR
ENSMUSG00000022674	Ube2v2	ENSMUST00000229244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022674	Ube2v2	ENSMUST00000229859	ENSMUSP00000155832	TRANSLATION	nonsense_mediated_decay	-	-	-	105	0	2.5	10.6	62.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022674	Ube2v2	ENSMUST00000118236	ENSMUSP00000112802	TRANSLATION	protein_coding	-	-	5	63	0	1.5	0	0	0	-4,-2	-	-	1.338	MINOR
ENSMUSG00000022674	Ube2v2	ENSMUST00000096234	ENSMUSP00000093951	TRANSLATION	protein_coding	-	-	3	105	0	2.5	10.6	62.3	0	-4,-6	-	-	11.16	MINOR
ENSMUSG00000022674	Ube2v2	ENSMUST00000115777	ENSMUSP00000111443	TRANSLATION	protein_coding	-	CCDS37265.1	1	145	0	3.83	19.5	65.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039209	Rpl39l	ENSMUST00000121292	ENSMUSP00000112791	TRANSLATION	protein_coding	-	CCDS37248.1	2	51	0	1	19.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000039209	Rpl39l	ENSMUST00000044103	ENSMUSP00000041794	TRANSLATION	protein_coding	-	CCDS37248.1	1	51	0	1	19.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000005899	Smpd4	ENSMUST00000163476	ENSMUSP00000131867	TRANSLATION	protein_coding	-	CCDS49781.1	1	794	0	0	1.7	1130.3	3	-4,-7	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232021	ENSMUSP00000156079	TRANSLATION	protein_coding	-	-	-	721	0	0	1.2	903.2	3	-4,-7	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231722	ENSMUSP00000156043	TRANSLATION	nonsense_mediated_decay	-	-	-	55	0	0	0	57.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000006053	ENSMUSP00000006053	TRANSLATION	protein_coding	-	CCDS28009.1	1	823	0	0	1.5	1489.2	3	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000005899	Smpd4	ENSMUST00000232468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000231792	ENSMUSP00000156362	TRANSLATION	protein_coding	-	-	-	573	0	0	1.2	903.2	3	-4,-6	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000165363	ENSMUSP00000130720	TRANSLATION	protein_coding	-	CCDS49779.1	1	793	0	0	0.5	1118	3	-4,-7	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231257	ENSMUSP00000156136	TRANSLATION	protein_coding	stop	-	-	125	0	0	0	227.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000232442	ENSMUSP00000155910	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	214.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232271	ENSMUSP00000156215	TRANSLATION	protein_coding	-	-	-	499	0	0	0	741.9	3	-4,-2	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231311	ENSMUSP00000156127	TRANSLATION	protein_coding	stop	-	-	128	0	0	0	219.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000090159	ENSMUSP00000087620	TRANSLATION	protein_coding	-	CCDS49780.1	1	807	0	0	0.5	1106.9	3	-4,-7	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005899	Smpd4	ENSMUST00000231436	ENSMUSP00000155897	TRANSLATION	protein_coding	-	-	-	751	0	0	0	962.1	3	-4,-7	-	-	0	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231627	ENSMUSP00000156051	TRANSLATION	nonsense_mediated_decay	-	-	-	50	0	0	0	55	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000232116	ENSMUSP00000155998	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	0	0	165.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000232578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000231378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000232043	ENSMUSP00000156353	TRANSLATION	protein_coding	stop	-	-	82	0	0	0	148.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005899	Smpd4	ENSMUST00000231736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005899	Smpd4	ENSMUST00000232487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005899	Smpd4	ENSMUST00000231887	ENSMUSP00000155917	TRANSLATION	protein_coding	stop	-	-	27	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061100	Retnla	ENSMUST00000238847	ENSMUSP00000159097	TRANSLATION	protein_coding	-	-	-	111	0	1.62	1	109.1	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000061100	Retnla	ENSMUST00000023329	ENSMUSP00000023329	TRANSLATION	protein_coding	-	CCDS49864.1	1	138	0	1.62	0.5	109.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000047109	Cldn14	ENSMUST00000050962	ENSMUSP00000062045	TRANSLATION	protein_coding	-	CCDS28345.1	1	239	0	2.55	5.1	101.2	5	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000047109	Cldn14	ENSMUST00000169391	ENSMUSP00000126455	TRANSLATION	protein_coding	-	CCDS28345.1	2	239	0	2.55	5.1	101.2	5	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000047109	Cldn14	ENSMUST00000232406	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047109	Cldn14	ENSMUST00000177648	ENSMUSP00000136156	TRANSLATION	protein_coding	-	CCDS28345.1	2	239	0	2.55	5.1	101.2	5	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000047109	Cldn14	ENSMUST00000137163	ENSMUSP00000155889	TRANSLATION	protein_coding	stop	-	2	50	0	1	0	0	2	1,-3	-	-	-1	MINOR
ENSMUSG00000047109	Cldn14	ENSMUST00000142083	ENSMUSP00000156176	TRANSLATION	protein_coding	stop	-	2	69	0	1.5	0	32.7	2	1,-3	-	-	-1	MINOR
ENSMUSG00000046613	Vwa5b2	ENSMUST00000145483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046613	Vwa5b2	ENSMUST00000149236	ENSMUSP00000124117	TRANSLATION	nonsense_mediated_decay	-	-	2	413	0	0	0	138	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046613	Vwa5b2	ENSMUST00000159736	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046613	Vwa5b2	ENSMUST00000100074	ENSMUSP00000097652	TRANSLATION	protein_coding	-	CCDS37288.1	1	602	0	0	0.5	207.8	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000046613	Vwa5b2	ENSMUST00000231608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046613	Vwa5b2	ENSMUST00000232474	ENSMUSP00000155934	TRANSLATION	protein_coding	stop	-	-	57	0	0	0	56.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046613	Vwa5b2	ENSMUST00000046188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046613	Vwa5b2	ENSMUST00000096197	ENSMUSP00000093911	TRANSLATION	protein_coding	-	CCDS49792.1	5	1248	0	0	0.5	207.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000046613	Vwa5b2	ENSMUST00000159780	ENSMUSP00000123727	TRANSLATION	protein_coding	-	-	5	1248	0	0	0.5	207.8	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000046613	Vwa5b2	ENSMUST00000232279	ENSMUSP00000155978	TRANSLATION	protein_coding	stop	-	-	89	0	0	0	110.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046613	Vwa5b2	ENSMUST00000162919	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046613	Vwa5b2	ENSMUST00000161257	ENSMUSP00000155938	TRANSLATION	protein_coding	stop	-	2	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046613	Vwa5b2	ENSMUST00000161715	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087141	Plcxd2	ENSMUST00000130481	ENSMUSP00000114852	TRANSLATION	protein_coding	-	CCDS49863.1	1	340	5	0.72	7.6	0	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000022797	Tfrc	ENSMUST00000128285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022797	Tfrc	ENSMUST00000155929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022797	Tfrc	ENSMUST00000231912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022797	Tfrc	ENSMUST00000124243	ENSMUSP00000123423	TRANSLATION	protein_coding	stop	-	5	12	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022797	Tfrc	ENSMUST00000137901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022797	Tfrc	ENSMUST00000120680	ENSMUSP00000113028	TRANSLATION	protein_coding	-	-	2	515	5	8.9	0	70.1	1	-4,-6	-	-	8.432	MINOR
ENSMUSG00000022797	Tfrc	ENSMUST00000023486	ENSMUSP00000023486	TRANSLATION	protein_coding	-	CCDS28123.1	1	763	5	14.15	1.5	112.9	1	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000053062	Jam2	ENSMUST00000098407	ENSMUSP00000096007	TRANSLATION	protein_coding	-	-	1	181	0	1.89	0	35.8	0	2,-3	-	-	3.492	MINOR
ENSMUSG00000053062	Jam2	ENSMUST00000138054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053062	Jam2	ENSMUST00000231910	ENSMUSP00000156235	TRANSLATION	protein_coding	-	-	-	322	0	4.428	0	83.6	1	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000053062	Jam2	ENSMUST00000114195	ENSMUSP00000109833	TRANSLATION	protein_coding	-	CCDS37381.1	1	298	0	4.428	1.5	83.6	1	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000047434	Xxylt1	ENSMUST00000153859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047434	Xxylt1	ENSMUST00000055389	ENSMUSP00000050246	TRANSLATION	protein_coding	-	CCDS49822.1	1	392	2	4	6.3	28.7	0	-2,0	-	-	16	PRINCIPAL:1
ENSMUSG00000047434	Xxylt1	ENSMUST00000140566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047434	Xxylt1	ENSMUST00000142870	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041134	Cyyr1	ENSMUST00000175700	ENSMUSP00000135363	TRANSLATION	protein_coding	-	-	1	68	0	0	0	81.1	0	4,-1	-	-	0	MINOR
ENSMUSG00000041134	Cyyr1	ENSMUST00000163020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041134	Cyyr1	ENSMUST00000114174	ENSMUSP00000109811	TRANSLATION	protein_coding	-	CCDS28286.1	1	165	0	0	1.5	267.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000041134	Cyyr1	ENSMUST00000162621	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022841	Ap2m1	ENSMUST00000135420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000133443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000150986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000150537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000232001	ENSMUSP00000156123	TRANSLATION	protein_coding	stop	-	-	119	0	3.33	0	34.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022841	Ap2m1	ENSMUST00000090023	ENSMUSP00000087477	TRANSLATION	protein_coding	-	CCDS79436.1	1	433	0	11.08	21.5	299.5	0	-4,-6	-	-	16	ALTERNATIVE:1
ENSMUSG00000022841	Ap2m1	ENSMUST00000148507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000007216	ENSMUSP00000007216	TRANSLATION	protein_coding	-	CCDS28048.1	5	435	0	11.08	21.5	299.5	0	-4,-6	-	-	16	PRINCIPAL:3
ENSMUSG00000022841	Ap2m1	ENSMUST00000126788	ENSMUSP00000156295	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022841	Ap2m1	ENSMUST00000134981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022841	Ap2m1	ENSMUST00000131203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060657	Marf1	ENSMUST00000231032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060657	Marf1	ENSMUST00000229614	ENSMUSP00000154869	TRANSLATION	protein_coding	-	-	-	576	0	1	0	199.1	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000060657	Marf1	ENSMUST00000090300	ENSMUSP00000087770	TRANSLATION	protein_coding	-	CCDS37262.1	5	1736	0	3	1.5	404.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000005982	Naa60	ENSMUST00000115860	ENSMUSP00000111526	TRANSLATION	protein_coding	-	CCDS37239.1	1	242	31	7.08	16.1	55.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005982	Naa60	ENSMUST00000151988	ENSMUSP00000118782	TRANSLATION	protein_coding	stop	-	3	168	22	5	0	55.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000176625	ENSMUSP00000134768	TRANSLATION	protein_coding	-	CCDS70676.1	2	177	31	5.33	1.7	42.5	0	-4,-5	-	-	13.306	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000147949	ENSMUSP00000135141	TRANSLATION	nonsense_mediated_decay	-	-	2	79	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000186375	ENSMUSP00000140031	TRANSLATION	protein_coding	-	CCDS37239.1	1	242	31	7.08	16.1	55.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005982	Naa60	ENSMUST00000143537	ENSMUSP00000135188	TRANSLATION	nonsense_mediated_decay	-	-	5	133	12	3.25	0.5	24.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000135093	ENSMUSP00000114615	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000150655	ENSMUSP00000135206	TRANSLATION	protein_coding	-	CCDS37239.1	2	242	31	7.08	16.1	55.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000005982	Naa60	ENSMUST00000176224	ENSMUSP00000135152	TRANSLATION	protein_coding	-	-	5	166	21	4.58	0	0	0	-4,-5	-	-	1.002	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000175809	ENSMUSP00000135810	TRANSLATION	protein_coding	-	-	5	92	0	2.316	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005982	Naa60	ENSMUST00000140832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059305	Vpreb1	ENSMUST00000231704	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059305	Vpreb1	ENSMUST00000075017	ENSMUSP00000074537	TRANSLATION	protein_coding	-	CCDS27989.1	1	142	0	1.5	0.5	78.9	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059305	Vpreb1	ENSMUST00000232670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059305	Vpreb1	ENSMUST00000231345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068067	1110057P08Rik	ENSMUST00000089097	ENSMUSP00000086498	TRANSLATION	protein_coding	-	-	-	48	0	0	0	24.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048101	Olfr19	ENSMUST00000057886	ENSMUSP00000053393	TRANSLATION	protein_coding	-	CCDS27987.1	-	309	0	0.42	6.3	166.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000048101	Olfr19	ENSMUST00000206365	ENSMUSP00000145655	TRANSLATION	protein_coding	-	CCDS27987.1	3	309	0	0.42	6.3	166.9	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000003235	Eif2b5	ENSMUST00000148714	ENSMUSP00000121169	TRANSLATION	protein_coding	start	-	5	160	0	3.816	0	45	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003235	Eif2b5	ENSMUST00000231315	ENSMUSP00000155949	TRANSLATION	protein_coding	start	-	-	303	0	5.066	0	69.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003235	Eif2b5	ENSMUST00000003320	ENSMUSP00000003320	TRANSLATION	protein_coding	-	CCDS28047.1	1	717	0	10.831	1.5	91	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022754	Tmem45a	ENSMUST00000232373	ENSMUSP00000155931	TRANSLATION	protein_coding	stop	-	-	131	0	0	0	0	5	-4,-2	-	-	-1	MINOR
ENSMUSG00000022754	Tmem45a	ENSMUST00000135672	ENSMUSP00000116978	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000022754	Tmem45a	ENSMUST00000148452	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022754	Tmem45a	ENSMUST00000023435	ENSMUSP00000023435	TRANSLATION	protein_coding	-	CCDS28226.1	1	273	0	0	1.5	119.9	8	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000006134	Crkl	ENSMUST00000231228	ENSMUSP00000155860	TRANSLATION	protein_coding	stop	-	-	148	0	2	0	79.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000006134	Crkl	ENSMUST00000231629	ENSMUSP00000156063	TRANSLATION	protein_coding	-	-	-	108	0	1	0.5	79.5	0	-4,-2	-	-	0	MINOR
ENSMUSG00000006134	Crkl	ENSMUST00000006293	ENSMUSP00000006293	TRANSLATION	protein_coding	-	CCDS28002.1	1	303	0	4	12.8	183.5	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000035638	Muc20	ENSMUST00000115116	ENSMUSP00000110769	TRANSLATION	protein_coding	-	CCDS49829.1	1	688	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:4
ENSMUSG00000035638	Muc20	ENSMUST00000041123	ENSMUSP00000041221	TRANSLATION	protein_coding	-	CCDS49830.1	1	656	0	0	0.5	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000052537	Olfr198	ENSMUST00000064452	ENSMUSP00000065535	TRANSLATION	protein_coding	-	CCDS28249.1	-	306	0	0.2	5.1	152.5	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000052537	Olfr198	ENSMUST00000208244	ENSMUSP00000146813	TRANSLATION	protein_coding	-	CCDS28249.1	2	306	0	0.2	5.1	152.5	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000038965	Ube2l3	ENSMUST00000232139	ENSMUSP00000156121	TRANSLATION	protein_coding	-	CCDS27997.1	-	154	0	4.08	19.5	154.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038965	Ube2l3	ENSMUST00000232668	ENSMUSP00000156283	TRANSLATION	protein_coding	start	-	-	146	0	3.778	0	149.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038965	Ube2l3	ENSMUST00000231557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038965	Ube2l3	ENSMUST00000232035	ENSMUSP00000156034	TRANSLATION	protein_coding	-	-	-	114	0	2.91	0	112.6	0	-4,-5	-	-	7.164	MINOR
ENSMUSG00000038965	Ube2l3	ENSMUST00000090192	ENSMUSP00000087658	TRANSLATION	protein_coding	-	CCDS27997.1	1	154	0	4.08	19.5	154.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038965	Ube2l3	ENSMUST00000232594	ENSMUSP00000156000	TRANSLATION	protein_coding	start	-	-	32	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038965	Ube2l3	ENSMUST00000232514	ENSMUSP00000156193	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038965	Ube2l3	ENSMUST00000231643	ENSMUSP00000156336	TRANSLATION	protein_coding	-	-	-	122	0	2.83	7.8	130.6	0	-4,-6	-	-	9.554	MINOR
ENSMUSG00000050761	Gp1bb	ENSMUST00000167388	ENSMUSP00000126292	TRANSLATION	protein_coding	-	CCDS49787.1	2	206	0	1	1.5	19.2	1	3,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000050761	Gp1bb	ENSMUST00000051160	ENSMUSP00000059270	TRANSLATION	protein_coding	-	CCDS28025.1	-	214	0	1	0.5	19.2	1	2,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000022865	Cxadr	ENSMUST00000232189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022865	Cxadr	ENSMUST00000023572	ENSMUSP00000023572	TRANSLATION	protein_coding	-	CCDS28276.1	1	365	0	4.85	5.1	98.7	1	2,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000022865	Cxadr	ENSMUST00000231356	ENSMUSP00000156281	TRANSLATION	protein_coding	-	-	-	164	0	2.85	0.5	71.9	0	2,-2	-	-	6.366	MINOR
ENSMUSG00000022865	Cxadr	ENSMUST00000231251	ENSMUSP00000156128	TRANSLATION	nonsense_mediated_decay	start	-	-	52	0	1	0	35.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022865	Cxadr	ENSMUST00000232148	ENSMUSP00000155907	TRANSLATION	protein_coding	stop	-	-	136	0	2.85	0	69.2	0	2,-2	-	-	-1	MINOR
ENSMUSG00000022865	Cxadr	ENSMUST00000114229	ENSMUSP00000109867	TRANSLATION	protein_coding	-	CCDS37379.1	1	352	0	4.85	3.9	98.7	1	2,-2	-	-	13.414	ALTERNATIVE:2
ENSMUSG00000040732	Erg	ENSMUST00000122199	ENSMUSP00000114072	TRANSLATION	protein_coding	-	CCDS79493.1	1	479	0	4.27	15.7	212.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000040732	Erg	ENSMUST00000176345	ENSMUSP00000135568	TRANSLATION	protein_coding	-	-	5	387	0	4.27	3.2	212.5	0	-4,-5	-	-	12.6	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000233881	ENSMUSP00000156669	TRANSLATION	protein_coding	-	CCDS37411.1	-	486	0	4.27	9.3	212.5	0	-4,-5	-	-	14.26	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000113848	ENSMUSP00000109479	TRANSLATION	protein_coding	-	CCDS79496.1	1	463	0	4.225	0.5	212.5	0	-4,-5	-	-	11.91	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000121809	ENSMUSP00000113723	TRANSLATION	protein_coding	-	-	5	455	0	4.27	7.8	212.5	0	-4,-5	-	-	13.852	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000171646	ENSMUSP00000132766	TRANSLATION	protein_coding	-	CCDS79494.1	1	439	0	4.225	0.5	212.5	0	-4,-5	-	-	11.91	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000233269	ENSMUSP00000156926	TRANSLATION	protein_coding	-	CCDS79495.1	-	462	0	4.27	4.1	212.5	0	-4,-5	-	-	12.844	MINOR
ENSMUSG00000040732	Erg	ENSMUST00000233664	ENSMUSP00000156927	TRANSLATION	protein_coding	-	CCDS79492.1	-	456	0	4.225	1.5	212.5	0	-4,-5	-	-	12.046	MINOR
ENSMUSG00000056822	Olfr166	ENSMUST00000213531	ENSMUSP00000150568	TRANSLATION	protein_coding	-	CCDS28034.1	5	312	0	0.28	5.1	169.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000056822	Olfr166	ENSMUST00000216465	ENSMUSP00000150764	TRANSLATION	protein_coding	-	CCDS28034.1	5	312	0	0.28	5.1	169.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000056822	Olfr166	ENSMUST00000074739	ENSMUSP00000074299	TRANSLATION	protein_coding	-	CCDS28034.1	-	312	0	0.28	5.1	169.2	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022957	Itsn1	ENSMUST00000126374	ENSMUSP00000114718	TRANSLATION	nonsense_mediated_decay	start	-	1	73	0	1.45	0	24.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000231535	ENSMUSP00000156037	TRANSLATION	protein_coding	stop	-	-	131	5	3.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000113996	ENSMUSP00000109629	TRANSLATION	protein_coding	-	-	5	1142	10	12.98	1.2	397.4	0	-4,-7	-	-	1.401	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000139890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000133389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022957	Itsn1	ENSMUST00000124094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022957	Itsn1	ENSMUST00000113993	ENSMUSP00000109626	TRANSLATION	protein_coding	-	-	5	1147	10	12.98	2.4	393.9	0	-4,-7	-	-	1.815	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000131739	ENSMUSP00000114145	TRANSLATION	nonsense_mediated_decay	start	-	1	66	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000064797	ENSMUSP00000066361	TRANSLATION	protein_coding	-	-	5	1719	17	26.18	2.9	913.8	0	-4,-7	-	-	18.445	ALTERNATIVE:2
ENSMUSG00000022957	Itsn1	ENSMUST00000138117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000153741	ENSMUSP00000117320	TRANSLATION	nonsense_mediated_decay	start	-	1	77	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000113999	ENSMUSP00000109632	TRANSLATION	protein_coding	-	-	5	1218	10	14.1	2.2	435.3	0	-4,-7	-	-	1.746	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000231852	ENSMUSP00000156129	TRANSLATION	protein_coding	-	-	-	279	7	6.83	0	312.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000114002	ENSMUSP00000109635	TRANSLATION	protein_coding	-	CCDS37402.1	5	1714	17	26.18	3.9	917.3	0	-4,-7	-	-	19	PRINCIPAL:2
ENSMUSG00000022957	Itsn1	ENSMUST00000114001	ENSMUSP00000109634	TRANSLATION	protein_coding	-	-	5	1176	10	14.1	0	438.8	0	-4,-7	-	-	1.332	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000135057	ENSMUSP00000117018	TRANSLATION	protein_coding	stop	-	5	359	10	5.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000095909	ENSMUSP00000093598	TRANSLATION	protein_coding	-	CCDS49914.1	1	621	10	5.83	0.5	0	0	-4,-7	-	-	1.332	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000141073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022957	Itsn1	ENSMUST00000131983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000231735	ENSMUSP00000156289	TRANSLATION	protein_coding	-	-	-	279	7	6.83	0	312.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000154967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000137575	ENSMUSP00000156103	TRANSLATION	nonsense_mediated_decay	start	-	1	16	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000151044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022957	Itsn1	ENSMUST00000141625	ENSMUSP00000115563	TRANSLATION	protein_coding	start/stop	-	5	173	2	4.33	0	91.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000125052	ENSMUSP00000115985	TRANSLATION	protein_coding	start/stop	-	5	346	2	8.08	0	359.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000143023	ENSMUSP00000119654	TRANSLATION	protein_coding	start	-	1	256	0	0.9	0	157.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000056482	ENSMUSP00000056011	TRANSLATION	protein_coding	-	CCDS49913.1	1	1213	10	14.1	1.7	438.8	0	-4,-7	-	-	1.573	MINOR
ENSMUSG00000022957	Itsn1	ENSMUST00000156841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000232198	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022957	Itsn1	ENSMUST00000144101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022957	Itsn1	ENSMUST00000231974	ENSMUSP00000155993	TRANSLATION	protein_coding	stop	-	-	187	5	3.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022805	Maats1	ENSMUST00000114740	ENSMUSP00000110388	TRANSLATION	protein_coding	-	-	1	345	0	0	0	208	0	-4,-5	-	-	5.826	ALTERNATIVE:2
ENSMUSG00000022805	Maats1	ENSMUST00000023501	ENSMUSP00000023501	TRANSLATION	protein_coding	-	CCDS37341.1	1	783	0	0	0.5	210.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000022898	Vps26c	ENSMUST00000127449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022898	Vps26c	ENSMUST00000023615	ENSMUSP00000023615	TRANSLATION	protein_coding	-	CCDS28349.1	1	297	0	2.38	15.3	254.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022898	Vps26c	ENSMUST00000133944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022898	Vps26c	ENSMUST00000232569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022898	Vps26c	ENSMUST00000142988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022898	Vps26c	ENSMUST00000125229	ENSMUSP00000156097	TRANSLATION	nonsense_mediated_decay	-	-	5	135	0	0.84	0	99.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022838	Eaf2	ENSMUST00000114829	ENSMUSP00000110477	TRANSLATION	protein_coding	-	CCDS49843.1	1	262	0	0	1.5	75.5	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000022838	Eaf2	ENSMUST00000138660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022838	Eaf2	ENSMUST00000023537	ENSMUSP00000023537	TRANSLATION	protein_coding	-	-	5	195	0	0	0.5	75.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000022838	Eaf2	ENSMUST00000147053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022838	Eaf2	ENSMUST00000134556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022838	Eaf2	ENSMUST00000075946	ENSMUSP00000075331	TRANSLATION	protein_coding	-	CCDS37335.1	1	132	0	0	1.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000022838	Eaf2	ENSMUST00000157072	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022838	Eaf2	ENSMUST00000114825	ENSMUSP00000110473	TRANSLATION	protein_coding	-	CCDS37335.1	1	132	0	0	1.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000022838	Eaf2	ENSMUST00000231782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003233	Dvl3	ENSMUST00000003318	ENSMUSP00000003318	TRANSLATION	protein_coding	-	CCDS37287.1	1	716	0	7.8	7.5	703.9	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000003233	Dvl3	ENSMUST00000171572	ENSMUSP00000130925	TRANSLATION	protein_coding	-	CCDS84210.1	1	718	0	7.8	7.5	703.9	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000003233	Dvl3	ENSMUST00000169552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003233	Dvl3	ENSMUST00000171774	ENSMUSP00000126082	TRANSLATION	protein_coding	-	-	5	699	0	7.8	0	703.9	0	-4,-5	-	-	12	MINOR
ENSMUSG00000022676	Snai2	ENSMUST00000023356	ENSMUSP00000023356	TRANSLATION	protein_coding	-	CCDS27974.1	1	269	19	2.125	11	115.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000008658	Rbfox1	ENSMUST00000229741	ENSMUSP00000155364	TRANSLATION	protein_coding	-	CCDS27936.1	-	417	0	3.57	7.6	200.9	0	-4,-7	-	-	14.424	PRINCIPAL:3
ENSMUSG00000008658	Rbfox1	ENSMUST00000231031	ENSMUSP00000154916	TRANSLATION	protein_coding	start	-	-	133	0	0	0	120.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000008658	Rbfox1	ENSMUST00000231088	ENSMUSP00000155799	TRANSLATION	protein_coding	-	-	-	358	0	3.45	0	207	0	-4,-5	-	-	11.76	MINOR
ENSMUSG00000008658	Rbfox1	ENSMUST00000115841	ENSMUSP00000111507	TRANSLATION	protein_coding	-	CCDS37245.1	5	396	0	3.57	8.1	207	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000008658	Rbfox1	ENSMUST00000230336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008658	Rbfox1	ENSMUST00000231194	ENSMUSP00000155321	TRANSLATION	protein_coding	-	-	-	396	0	3.57	0	207	0	-4,-5	-	-	12	MINOR
ENSMUSG00000008658	Rbfox1	ENSMUST00000056416	ENSMUSP00000049970	TRANSLATION	protein_coding	-	CCDS37245.1	1	396	0	3.57	8.1	207	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000008658	Rbfox1	ENSMUST00000230658	ENSMUSP00000155069	TRANSLATION	protein_coding	stop	-	-	289	0	3.57	0	121	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079594	Cstdc6	ENSMUST00000114850	ENSMUSP00000110500	TRANSLATION	protein_coding	-	CCDS49840.1	1	96	0	2.75	1.5	81	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022837	Iqcb1	ENSMUST00000129123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022837	Iqcb1	ENSMUST00000146272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022837	Iqcb1	ENSMUST00000142619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022837	Iqcb1	ENSMUST00000023535	ENSMUSP00000023535	TRANSLATION	protein_coding	-	CCDS28157.1	1	598	0	0	7.5	48.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022837	Iqcb1	ENSMUST00000137076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022837	Iqcb1	ENSMUST00000232162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022837	Iqcb1	ENSMUST00000153373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022837	Iqcb1	ENSMUST00000114819	ENSMUSP00000110467	TRANSLATION	protein_coding	-	-	1	597	0	0	0	48.9	0	-4,-5	-	-	6	MINOR
ENSMUSG00000022828	Gtf2e1	ENSMUST00000130350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022828	Gtf2e1	ENSMUST00000023525	ENSMUSP00000023525	TRANSLATION	protein_coding	-	CCDS28160.1	1	440	4	4	5.1	284.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071561	Cstdc5	ENSMUST00000096089	ENSMUSP00000093794	TRANSLATION	protein_coding	-	CCDS37333.1	1	97	0	2.75	1.5	81.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071561	Cstdc5	ENSMUST00000146691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071561	Cstdc5	ENSMUST00000138796	ENSMUSP00000117436	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	1.882	0	60.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074995	Olfr201	ENSMUST00000099656	ENSMUSP00000097248	TRANSLATION	protein_coding	-	CCDS37369.1	-	308	0	0.36	1.5	157.9	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000074995	Olfr201	ENSMUST00000216834	ENSMUSP00000150660	TRANSLATION	protein_coding	-	CCDS37369.1	5	308	0	0.36	1.5	157.9	7	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000068182	Olfr203	ENSMUST00000215893	ENSMUSP00000149906	TRANSLATION	protein_coding	-	CCDS79469.1	5	306	0	0.16	6.4	158.1	7	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000068182	Olfr203	ENSMUST00000089305	ENSMUSP00000086719	TRANSLATION	protein_coding	start	-	-	307	0	0.16	6.4	158.1	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000106668	Iglj1	ENSMUST00000199490	ENSMUSP00000142644	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000052133	Sema5b	ENSMUST00000149855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052133	Sema5b	ENSMUST00000133554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052133	Sema5b	ENSMUST00000120756	ENSMUSP00000112536	TRANSLATION	protein_coding	-	-	1	1122	3	11.46	0.5	587.8	2	2,-2	-	-	14.556	ALTERNATIVE:2
ENSMUSG00000052133	Sema5b	ENSMUST00000050625	ENSMUSP00000057494	TRANSLATION	protein_coding	-	CCDS28140.1	1	1093	3	11.46	2.9	595.2	2	2,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000052133	Sema5b	ENSMUST00000128966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052133	Sema5b	ENSMUST00000128347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052133	Sema5b	ENSMUST00000149097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052133	Sema5b	ENSMUST00000139805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092009	Myh15	ENSMUST00000168680	ENSMUSP00000127539	TRANSLATION	protein_coding	-	CCDS49868.1	5	1925	15	37.16	0.5	1265.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022756	Slc7a4	ENSMUST00000232336	ENSMUSP00000156294	TRANSLATION	protein_coding	stop	-	-	81	0	0.4	0	0	3	-4,-1	-	-	-1	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000231552	ENSMUSP00000156257	TRANSLATION	protein_coding	stop	-	-	140	0	1.44	0	35	8	-4,-1	-	-	-1	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000232186	ENSMUSP00000156113	TRANSLATION	protein_coding	stop	-	-	76	0	0	0	0	3	-4,-1	-	-	-1	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000232385	ENSMUSP00000156098	TRANSLATION	protein_coding	-	-	-	430	0	1.74	0	103	19	-4,-2	-	-	3.984	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000232429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022756	Slc7a4	ENSMUST00000231283	ENSMUSP00000155885	TRANSLATION	protein_coding	stop	-	-	117	0	0.85	0	25.3	6	-4,-1	-	-	-1	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000172164	ENSMUSP00000127280	TRANSLATION	protein_coding	-	CCDS28008.1	1	635	0	3.1	1.5	191.3	28	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022756	Slc7a4	ENSMUST00000063544	ENSMUSP00000067243	TRANSLATION	protein_coding	-	CCDS28008.1	1	635	0	3.1	1.5	191.3	28	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000022756	Slc7a4	ENSMUST00000231615	ENSMUSP00000156027	TRANSLATION	protein_coding	-	-	-	430	0	1.74	0	103	19	-4,-2	-	-	3.984	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000231645	ENSMUSP00000155908	TRANSLATION	protein_coding	stop	-	-	242	0	1.61	0	36.4	8	-3,0	-	-	-1	MINOR
ENSMUSG00000022756	Slc7a4	ENSMUST00000232226	ENSMUSP00000156166	TRANSLATION	protein_coding	-	-	-	452	0	2.94	0	107.1	17	-4,-1	-	-	6.63	MINOR
ENSMUSG00000022718	Dgcr8	ENSMUST00000232414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022718	Dgcr8	ENSMUST00000232476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022718	Dgcr8	ENSMUST00000144536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022718	Dgcr8	ENSMUST00000009321	ENSMUSP00000009321	TRANSLATION	protein_coding	-	CCDS28018.1	1	773	0	8.95	3.9	71.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000022718	Dgcr8	ENSMUST00000128856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022718	Dgcr8	ENSMUST00000232424	ENSMUSP00000155858	TRANSLATION	protein_coding	stop	-	-	141	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022718	Dgcr8	ENSMUST00000156274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022718	Dgcr8	ENSMUST00000134431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022718	Dgcr8	ENSMUST00000152033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022718	Dgcr8	ENSMUST00000115633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075330	A930003A15Rik	ENSMUST00000231564	ENSMUSP00000159148	TRANSLATION	protein_coding	-	-	-	55	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000075330	A930003A15Rik	ENSMUST00000100083	ENSMUSP00000159001	TRANSLATION	protein_coding	-	-	1	87	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000043357	Olfr187	ENSMUST00000207673	ENSMUSP00000147035	TRANSLATION	protein_coding	-	CCDS28243.1	2	308	0	0.28	7.5	168.3	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043357	Olfr187	ENSMUST00000206428	ENSMUSP00000145932	TRANSLATION	protein_coding	-	CCDS28243.1	-	308	0	0.28	7.5	168.3	7	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033306	Lpp	ENSMUST00000231279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033306	Lpp	ENSMUST00000078988	ENSMUSP00000078005	TRANSLATION	protein_coding	-	CCDS28083.1	1	613	24	3.83	7.5	123	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000033306	Lpp	ENSMUST00000038053	ENSMUSP00000036304	TRANSLATION	protein_coding	-	CCDS28083.1	1	613	24	3.83	7.5	123	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000033306	Lpp	ENSMUST00000231352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033306	Lpp	ENSMUST00000115314	ENSMUSP00000110969	TRANSLATION	protein_coding	-	CCDS49807.1	1	488	24	3.83	0.5	123	0	-4,-6	-	-	18	MINOR
ENSMUSG00000033306	Lpp	ENSMUST00000232546	ENSMUSP00000156178	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051980	Casr	ENSMUST00000174750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051980	Casr	ENSMUST00000114847	ENSMUSP00000110496	TRANSLATION	protein_coding	-	-	1	1002	4	4.32	0	597.2	10	4,-1	-	-	11.232	MINOR
ENSMUSG00000051980	Casr	ENSMUST00000063597	ENSMUSP00000069080	TRANSLATION	protein_coding	-	CCDS28154.1	1	1079	6	5.32	1.5	643.4	10	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000051980	Casr	ENSMUST00000172826	ENSMUSP00000133500	TRANSLATION	protein_coding	-	CCDS28154.1	5	1079	6	5.32	1.5	643.4	10	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000093701	Gm21970	ENSMUST00000160764	ENSMUSP00000123997	TRANSLATION	protein_coding,RT	start/stop	-	5	295	0	5.9	0	212.8	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000093701	Gm21970	ENSMUST00000161517	ENSMUSP00000125579	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	134	0	1.4	0	63.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000022685	Parn	ENSMUST00000229251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022685	Parn	ENSMUST00000058884	ENSMUSP00000055969	TRANSLATION	protein_coding	-	CCDS37259.1	1	624	12	15.33	1.5	434.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022685	Parn	ENSMUST00000231003	ENSMUSP00000155335	TRANSLATION	nonsense_mediated_decay	-	-	-	209	2	5.83	0	157.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022685	Parn	ENSMUST00000229042	ENSMUSP00000155076	TRANSLATION	nonsense_mediated_decay	-	-	-	82	2	2.58	0	71.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022685	Parn	ENSMUST00000229526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061751	Kalrn	ENSMUST00000114960	ENSMUSP00000110611	TRANSLATION	protein_coding	-	CCDS49836.1	1	1654	0	12.26	5.3	334.2	0	-4,-7	-	-	2	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000114963	ENSMUSP00000110614	TRANSLATION	protein_coding	-	-	5	739	0	10.21	0	289.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000124430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061751	Kalrn	ENSMUST00000151491	ENSMUSP00000123416	TRANSLATION	protein_coding	start/stop	-	5	1403	0	12.26	0	289	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000137216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061751	Kalrn	ENSMUST00000114964	ENSMUSP00000110615	TRANSLATION	protein_coding	-	-	5	674	0	9.21	4.1	222.8	0	-4,-5	-	-	1.442	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000114954	ENSMUSP00000110604	TRANSLATION	protein_coding	-	-	1	1022	0	10.615	0	221.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000231657	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061751	Kalrn	ENSMUST00000114966	ENSMUSP00000110617	TRANSLATION	protein_coding	-	-	5	705	0	9.21	4.1	264.2	0	-4,-5	-	-	1.442	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000142817	ENSMUSP00000116188	TRANSLATION	protein_coding	start	-	5	2371	0	22.47	0	662.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000089655	ENSMUSP00000087084	TRANSLATION	protein_coding	-	-	5	1663	0	12.26	5.3	327.1	0	-4,-7	-	-	2	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000114961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061751	Kalrn	ENSMUST00000132569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061751	Kalrn	ENSMUST00000114947	ENSMUSP00000110597	TRANSLATION	protein_coding	-	-	5	823	0	7.815	0	194.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000114949	ENSMUSP00000110599	TRANSLATION	protein_coding	-	-	5	1013	0	10.78	0	228.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000156668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061751	Kalrn	ENSMUST00000132002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061751	Kalrn	ENSMUST00000114953	ENSMUSP00000110603	TRANSLATION	protein_coding	-	-	1	1022	0	10.615	0	221.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000076810	ENSMUSP00000076088	TRANSLATION	protein_coding	-	-	5	2964	17	27.07	0	976.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000061751	Kalrn	ENSMUST00000232157	ENSMUSP00000156147	TRANSLATION	protein_coding	-	-	-	673	0	9.21	4.1	222.8	0	-4,-5	-	-	1.442	MINOR
ENSMUSG00000061751	Kalrn	ENSMUST00000114973	ENSMUSP00000110624	TRANSLATION	protein_coding	-	-	5	1295	17	13.81	0.5	578.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000035107	Dcbld2	ENSMUST00000135415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035107	Dcbld2	ENSMUST00000046663	ENSMUSP00000039915	TRANSLATION	protein_coding	-	CCDS28229.1	1	769	0	4.725	1.5	236.5	0	0,4	-	-	12	PRINCIPAL:1
ENSMUSG00000035107	Dcbld2	ENSMUST00000149321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035107	Dcbld2	ENSMUST00000142830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035107	Dcbld2	ENSMUST00000130409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035107	Dcbld2	ENSMUST00000150817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035107	Dcbld2	ENSMUST00000134324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048939	Atp13a5	ENSMUST00000142681	ENSMUSP00000118627	TRANSLATION	nonsense_mediated_decay	-	-	1	949	6	9.08	0	285.9	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000048939	Atp13a5	ENSMUST00000152040	ENSMUSP00000114703	TRANSLATION	protein_coding	stop	-	3	227	0	0.93	0	126.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000048939	Atp13a5	ENSMUST00000075806	ENSMUSP00000075204	TRANSLATION	protein_coding	-	CCDS28095.1	1	1216	6	9.08	2.7	285.9	12	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048939	Atp13a5	ENSMUST00000143373	ENSMUSP00000121208	TRANSLATION	protein_coding	-	CCDS70705.1	1	1171	6	8.68	0.5	255	10	-4,-5	-	-	15.348	MINOR
ENSMUSG00000052384	Nrros	ENSMUST00000150250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052384	Nrros	ENSMUST00000099991	ENSMUSP00000097571	TRANSLATION	protein_coding	-	CCDS84220.1	1	693	0	2.26	1.5	99.2	1	-2,-3	-	-	11.748	ALTERNATIVE:2
ENSMUSG00000052384	Nrros	ENSMUST00000136809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052384	Nrros	ENSMUST00000130410	ENSMUSP00000122290	TRANSLATION	protein_coding	stop	-	3	144	0	1.84	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000052384	Nrros	ENSMUST00000143682	ENSMUSP00000119349	TRANSLATION	protein_coding	-	CCDS84220.1	1	693	0	2.26	1.5	99.2	1	-2,-3	-	-	11.748	ALTERNATIVE:2
ENSMUSG00000052384	Nrros	ENSMUST00000231836	ENSMUSP00000155965	TRANSLATION	protein_coding	-	-	-	685	0	2.36	0	99.2	1	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000052384	Nrros	ENSMUST00000126869	ENSMUSP00000116388	TRANSLATION	protein_coding	-	CCDS84220.1	1	693	0	2.26	1.5	99.2	1	-2,-3	-	-	11.748	ALTERNATIVE:2
ENSMUSG00000052384	Nrros	ENSMUST00000144345	ENSMUSP00000121492	TRANSLATION	protein_coding	stop	-	2	80	0	1.2	0	0	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000052384	Nrros	ENSMUST00000115163	ENSMUSP00000110817	TRANSLATION	protein_coding	-	CCDS28115.1	1	721	0	2.26	0.5	99.2	1	-4,-5	-	-	11.748	PRINCIPAL:3
ENSMUSG00000052384	Nrros	ENSMUST00000115165	ENSMUSP00000110819	TRANSLATION	protein_coding	-	CCDS84221.1	1	669	0	2.06	0.5	99.2	1	-4,-5	-	-	11.238	ALTERNATIVE:2
ENSMUSG00000022983	Scaf4	ENSMUST00000039280	ENSMUSP00000044472	TRANSLATION	protein_coding	-	CCDS37396.1	1	1209	0	4.98	0.5	97.9	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000022983	Scaf4	ENSMUST00000231443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022983	Scaf4	ENSMUST00000163419	ENSMUSP00000132250	TRANSLATION	protein_coding	-	CCDS84260.1	1	1183	0	4.98	0.5	97.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022983	Scaf4	ENSMUST00000232000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022983	Scaf4	ENSMUST00000232371	ENSMUSP00000156174	TRANSLATION	protein_coding	-	-	-	1184	0	4.98	0.5	97.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022983	Scaf4	ENSMUST00000231776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022983	Scaf4	ENSMUST00000231572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022983	Scaf4	ENSMUST00000231594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072214	Septin5	ENSMUST00000231622	ENSMUSP00000156279	TRANSLATION	protein_coding	stop	-	-	126	7	3.08	0	187.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072214	Septin5	ENSMUST00000231244	ENSMUSP00000156209	TRANSLATION	nonsense_mediated_decay	-	-	-	248	14	5.896	0	283.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072214	Septin5	ENSMUST00000231956	ENSMUSP00000156292	TRANSLATION	protein_coding	-	-	-	381	14	8.55	0	401	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000072214	Septin5	ENSMUST00000232653	ENSMUSP00000156265	TRANSLATION	protein_coding	-	-	-	378	14	8.8	5.8	417.7	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000072214	Septin5	ENSMUST00000096987	ENSMUSP00000094750	TRANSLATION	protein_coding	-	CCDS57021.1	1	369	14	8.8	5.3	417.7	0	-4,-5	-	-	19.792	PRINCIPAL:2
ENSMUSG00000065979	Cpped1	ENSMUST00000145169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000065979	Cpped1	ENSMUST00000096272	ENSMUSP00000093992	TRANSLATION	protein_coding	-	CCDS27964.1	1	312	6	1.04	8.8	49.8	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000065979	Cpped1	ENSMUST00000073371	ENSMUSP00000089104	TRANSLATION	protein_coding	-	-	1	153	2	0.32	0	0	0	-4,-7	-	-	3.846	MINOR
ENSMUSG00000065979	Cpped1	ENSMUST00000121750	ENSMUSP00000112587	TRANSLATION	protein_coding	-	-	1	298	5	1.04	0	49.3	0	-4,-6	-	-	16.938	MINOR
ENSMUSG00000065979	Cpped1	ENSMUST00000127972	ENSMUSP00000119989	TRANSLATION	protein_coding	stop	-	3	240	4	0.56	0	37.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096695	Olfr196	ENSMUST00000077027	ENSMUSP00000076285	TRANSLATION	protein_coding	-	CCDS28248.1	-	309	0	0	7.5	161.7	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000096695	Olfr196	ENSMUST00000205471	ENSMUSP00000145684	TRANSLATION	protein_coding	-	CCDS28248.1	3	309	0	0	7.5	161.7	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000008976	Gabpa	ENSMUST00000148035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008976	Gabpa	ENSMUST00000114184	ENSMUSP00000109822	TRANSLATION	protein_coding	-	CCDS28284.1	1	454	0	5.65	17	317.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000008976	Gabpa	ENSMUST00000126031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008976	Gabpa	ENSMUST00000139101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008976	Gabpa	ENSMUST00000009120	ENSMUSP00000009120	TRANSLATION	protein_coding	-	CCDS28284.1	1	454	0	5.65	17	317.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060469	Krtap19-3	ENSMUST00000075284	ENSMUSP00000133176	TRANSLATION	protein_coding	-	CCDS49895.1	-	87	0	0	0.5	36.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022548	Apod	ENSMUST00000023207	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022548	Apod	ENSMUST00000145837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022548	Apod	ENSMUST00000156456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022548	Apod	ENSMUST00000130560	ENSMUSP00000119827	TRANSLATION	protein_coding	-	CCDS28105.1	1	189	8	4	0.5	82.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022548	Apod	ENSMUST00000115230	ENSMUSP00000110885	TRANSLATION	protein_coding	-	CCDS28105.1	1	189	8	4	0.5	82.1	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000022548	Apod	ENSMUST00000155682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022604	Cep97	ENSMUST00000118500	ENSMUSP00000112663	TRANSLATION	protein_coding	-	-	1	784	0	3.4	0	31.2	0	-4,-6	-	-	9.54	MINOR
ENSMUSG00000022604	Cep97	ENSMUST00000117468	ENSMUSP00000112687	TRANSLATION	protein_coding	-	-	1	784	0	3.4	0	31.2	0	-4,-6	-	-	9.54	MINOR
ENSMUSG00000022604	Cep97	ENSMUST00000122280	ENSMUSP00000113009	TRANSLATION	protein_coding	-	CCDS49871.1	1	157	0	3.294	0.5	31.2	0	-4,-5	-	-	9.33	MINOR
ENSMUSG00000022604	Cep97	ENSMUST00000121703	ENSMUSP00000113470	TRANSLATION	protein_coding	-	CCDS49872.1	1	151	0	3.03	0.5	31.2	0	-4,-5	-	-	8.802	MINOR
ENSMUSG00000022604	Cep97	ENSMUST00000023270	ENSMUSP00000023270	TRANSLATION	protein_coding	-	CCDS28217.1	1	856	0	4.63	0.5	31.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022604	Cep97	ENSMUST00000121129	ENSMUSP00000112502	TRANSLATION	protein_coding	-	CCDS49873.1	1	158	0	3.36	0.5	31.2	0	-4,-5	-	-	9.462	MINOR
ENSMUSG00000093575	Gm20695	ENSMUST00000176233	ENSMUSP00000135826	TRANSLATION	protein_coding,RT	stop	-	5	282	10	3	0	244.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000093575	Gm20695	ENSMUST00000146935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022705	Drd3	ENSMUST00000229953	ENSMUSP00000155033	TRANSLATION	protein_coding	-	-	-	478	0	5.26	1.5	250.7	6	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000022705	Drd3	ENSMUST00000023390	ENSMUSP00000023390	TRANSLATION	protein_coding	-	CCDS28179.1	1	446	0	5.26	1.5	250.7	6	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000074996	Olfr199	ENSMUST00000099657	ENSMUSP00000097249	TRANSLATION	protein_coding	-	CCDS28250.1	-	308	0	0.36	1.5	161.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074996	Olfr199	ENSMUST00000214186	ENSMUSP00000150643	TRANSLATION	protein_coding	-	CCDS28250.1	5	308	0	0.36	1.5	161.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000022843	Clcn2	ENSMUST00000153075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022843	Clcn2	ENSMUST00000231381	ENSMUSP00000155933	TRANSLATION	nonsense_mediated_decay	start	-	-	155	0	3.05	0	95.3	7	-1,-4	-	-	-1	MINOR
ENSMUSG00000022843	Clcn2	ENSMUST00000144400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022843	Clcn2	ENSMUST00000148131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022843	Clcn2	ENSMUST00000131833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022843	Clcn2	ENSMUST00000120099	ENSMUSP00000112759	TRANSLATION	protein_coding	-	-	5	891	0	13.82	0	274.8	17	-2,-5	-	-	8.874	MINOR
ENSMUSG00000022843	Clcn2	ENSMUST00000232309	ENSMUSP00000155857	TRANSLATION	protein_coding	-	-	-	864	0	13.52	0	310.2	17	-2,-5	-	-	10.398	MINOR
ENSMUSG00000022843	Clcn2	ENSMUST00000123417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022843	Clcn2	ENSMUST00000007207	ENSMUSP00000007207	TRANSLATION	protein_coding	-	CCDS28057.1	1	908	0	14.32	0.5	310.2	19	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022843	Clcn2	ENSMUST00000131522	ENSMUSP00000122921	TRANSLATION	nonsense_mediated_decay	-	-	1	533	0	8.96	0	225.8	16	-2,-5	-	-	-1	MINOR
ENSMUSG00000022843	Clcn2	ENSMUST00000132512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053182	Gm609	ENSMUST00000232138	ENSMUSP00000156066	TRANSLATION	protein_coding	-	-	-	187	0	0.42	0	0	2	-4,-6	-	-	2.064	MINOR
ENSMUSG00000053182	Gm609	ENSMUST00000114585	ENSMUSP00000110233	TRANSLATION	protein_coding	-	CCDS28197.2	1	300	0	1.22	0.5	30.7	2	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000053182	Gm609	ENSMUST00000144346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012114	Med15	ENSMUST00000231413	ENSMUSP00000156107	TRANSLATION	protein_coding	stop	-	-	77	0	1.58	0	77.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000232012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000232431	ENSMUSP00000156371	TRANSLATION	protein_coding	stop	-	-	87	0	1.58	0	84	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000231231	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000232312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012114	Med15	ENSMUST00000231674	ENSMUSP00000156305	TRANSLATION	nonsense_mediated_decay	-	-	-	88	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000232667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000080936	ENSMUSP00000079737	TRANSLATION	protein_coding	-	CCDS37273.1	1	749	0	2.33	0.5	559.8	0	-4,-5	-	-	9.048	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000232005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000232163	ENSMUSP00000155915	TRANSLATION	protein_coding	start/stop	-	-	218	0	2	0	71.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000232645	ENSMUSP00000156242	TRANSLATION	protein_coding	-	-	-	639	0	1.58	0.5	529.7	0	-4,-5	-	-	5.31	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000232202	ENSMUSP00000156139	TRANSLATION	protein_coding	start/stop	-	-	354	0	2	0	48.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000012114	Med15	ENSMUST00000231480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000232401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000231494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012114	Med15	ENSMUST00000012259	ENSMUSP00000012259	TRANSLATION	protein_coding	-	CCDS37274.1	1	789	0	2.33	0.5	609	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000012114	Med15	ENSMUST00000231754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012114	Med15	ENSMUST00000232236	ENSMUSP00000156291	TRANSLATION	protein_coding	-	-	-	766	0	2.33	0.5	531.6	0	-4,-5	-	-	7.356	MINOR
ENSMUSG00000038055	Dexi	ENSMUST00000184863	ENSMUSP00000139108	TRANSLATION	protein_coding	-	CCDS37252.1	2	95	0	0	8.8	165.2	1	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000038055	Dexi	ENSMUST00000183355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038055	Dexi	ENSMUST00000038281	ENSMUSP00000047676	TRANSLATION	protein_coding	-	CCDS37252.1	1	95	0	0	8.8	165.2	1	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000051146	Camk2n2	ENSMUST00000052939	ENSMUSP00000057368	TRANSLATION	protein_coding	-	CCDS49795.1	1	79	0	0	15.3	155.1	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000000326	Comt	ENSMUST00000147720	ENSMUSP00000121810	TRANSLATION	protein_coding	stop	-	2	171	14	2.5	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000000326	Comt	ENSMUST00000165430	ENSMUSP00000130077	TRANSLATION	protein_coding	-	CCDS28021.1	5	265	22	4.25	0.5	0	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000326	Comt	ENSMUST00000000335	ENSMUSP00000000335	TRANSLATION	protein_coding	-	CCDS28021.1	1	265	22	4.25	0.5	0	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000326	Comt	ENSMUST00000115609	ENSMUSP00000111272	TRANSLATION	protein_coding	-	CCDS28021.1	1	265	22	4.25	0.5	0	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037991	Rmi2	ENSMUST00000037913	ENSMUSP00000042676	TRANSLATION	protein_coding	-	CCDS49761.1	1	149	0	2	2.9	148.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037991	Rmi2	ENSMUST00000181721	ENSMUSP00000137986	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	1.42	0	58.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053774	Ubxn7	ENSMUST00000232666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053774	Ubxn7	ENSMUST00000232016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053774	Ubxn7	ENSMUST00000115151	ENSMUSP00000110804	TRANSLATION	protein_coding	-	CCDS49826.1	1	489	0	8.1	7.8	175.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000053774	Ubxn7	ENSMUST00000232137	ENSMUSP00000156376	TRANSLATION	protein_coding	-	-	-	467	0	8.1	0.5	175.1	0	-4,-7	-	-	12	MINOR
ENSMUSG00000022945	Chaf1b	ENSMUST00000142316	ENSMUSP00000121034	TRANSLATION	protein_coding	stop	-	2	79	0	0.48	0	19.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022945	Chaf1b	ENSMUST00000143006	ENSMUSP00000155864	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0.27	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022945	Chaf1b	ENSMUST00000124313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022945	Chaf1b	ENSMUST00000128316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022945	Chaf1b	ENSMUST00000117099	ENSMUSP00000113684	TRANSLATION	protein_coding	-	CCDS28344.1	5	572	0	5.02	1.5	308.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022945	Chaf1b	ENSMUST00000120586	ENSMUSP00000113420	TRANSLATION	protein_coding	stop	-	5	96	0	1.94	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022945	Chaf1b	ENSMUST00000023666	ENSMUSP00000023666	TRANSLATION	protein_coding	-	CCDS28344.1	1	572	0	5.02	1.5	308.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022842	Ece2	ENSMUST00000122306	ENSMUSP00000114039	TRANSLATION	protein_coding	-	-	1	709	5	14.58	0.5	587.4	1	-4,-5	-	-	10.68	MINOR
ENSMUSG00000022842	Ece2	ENSMUST00000152246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022842	Ece2	ENSMUST00000145511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022842	Ece2	ENSMUST00000003898	ENSMUSP00000003898	TRANSLATION	protein_coding	-	CCDS28052.1	1	763	7	15.58	7.5	647.5	1	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000022842	Ece2	ENSMUST00000231739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022842	Ece2	ENSMUST00000133344	ENSMUSP00000119693	TRANSLATION	protein_coding	-	CCDS49796.1	1	734	7	15.58	6.5	647.5	1	-4,-7	-	-	20.538	ALTERNATIVE:1
ENSMUSG00000022842	Ece2	ENSMUST00000125971	ENSMUSP00000120239	TRANSLATION	protein_coding	start	-	1	527	5	11.7	0	454.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000064310	Zpld1	ENSMUST00000036412	ENSMUSP00000049012	TRANSLATION	protein_coding	-	CCDS28215.1	1	415	0	1.86	6.6	136.8	1	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000064310	Zpld1	ENSMUST00000143914	ENSMUSP00000119774	TRANSLATION	protein_coding	-	CCDS28215.1	1	415	0	1.86	6.6	136.8	1	4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000116594	Gm49601	ENSMUST00000231246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116594	Gm49601	ENSMUST00000231335	ENSMUSP00000156088	TRANSLATION	protein_coding,RT	-	-	-	365	14	7.75	0	417.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000116594	Gm49601	ENSMUST00000231642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116594	Gm49601	ENSMUST00000232152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116594	Gm49601	ENSMUST00000231400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000232533	ENSMUSP00000155945	TRANSLATION	protein_coding	-	-	-	118	3	3.1	0	76.9	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000231268	ENSMUSP00000156011	TRANSLATION	protein_coding	-	-	-	117	3	3.1	0	76.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000232614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000232346	ENSMUSP00000156036	TRANSLATION	protein_coding	-	-	-	68	0	2.1	1	76.9	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000232376	ENSMUSP00000156146	TRANSLATION	protein_coding	-	-	-	67	0	2.1	1.5	76.9	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000116673	A630089N07Rik	ENSMUST00000231741	ENSMUSP00000156068	TRANSLATION	protein_coding	stop	-	-	439	51	2.7	0	252.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022521	Crebbp	ENSMUST00000206464	ENSMUSP00000145798	TRANSLATION	protein_coding	start/stop	-	5	172	0	3.548	0	76.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022521	Crebbp	ENSMUST00000205685	ENSMUSP00000146076	TRANSLATION	protein_coding	start/stop	-	5	247	0	3	0	136.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022521	Crebbp	ENSMUST00000205945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022521	Crebbp	ENSMUST00000191387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022521	Crebbp	ENSMUST00000023165	ENSMUSP00000023165	TRANSLATION	protein_coding	-	CCDS27915.1	1	2441	12	18.63	1.5	796.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022521	Crebbp	ENSMUST00000206098	ENSMUSP00000145825	TRANSLATION	protein_coding	start/stop	-	5	127	1	2.75	0	43.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022521	Crebbp	ENSMUST00000205765	ENSMUSP00000146330	TRANSLATION	protein_coding	-	-	5	2403	12	17.63	0.5	768.8	0	-4,-5	-	-	14.34	MINOR
ENSMUSG00000022521	Crebbp	ENSMUST00000205344	ENSMUSP00000146029	TRANSLATION	protein_coding	start/stop	-	1	1107	12	13.585	0	476.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000118559	A930007A09Rik	ENSMUST00000239037	ENSMUSP00000159217	TRANSLATION	protein_coding	-	-	-	636	0	0	0	99.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000022831	Hcls1	ENSMUST00000164050	ENSMUSP00000127186	TRANSLATION	nonsense_mediated_decay	-	-	5	144	0	0	0	99	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022831	Hcls1	ENSMUST00000163755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022831	Hcls1	ENSMUST00000023531	ENSMUSP00000023531	TRANSLATION	protein_coding	-	CCDS37336.1	1	486	0	1.75	0.5	306.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064115	Cadm2	ENSMUST00000120594	ENSMUSP00000113500	TRANSLATION	protein_coding	-	CCDS84251.1	5	435	0	6.74	6.5	140.6	2	2,-3	-	-	13.76	ALTERNATIVE:1
ENSMUSG00000064115	Cadm2	ENSMUST00000114292	ENSMUSP00000109931	TRANSLATION	protein_coding	-	CCDS28270.1	1	404	0	6.47	6.1	140.6	2	1,0	-	-	13.074	PRINCIPAL:3
ENSMUSG00000064115	Cadm2	ENSMUST00000120898	ENSMUSP00000113178	TRANSLATION	protein_coding	-	CCDS49885.1	1	395	0	6.14	3.9	140.6	2	2,-3	-	-	11.614	MINOR
ENSMUSG00000064115	Cadm2	ENSMUST00000123266	ENSMUSP00000123192	TRANSLATION	protein_coding	stop	-	5	53	0	0.3	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064115	Cadm2	ENSMUST00000128168	ENSMUSP00000134554	TRANSLATION	protein_coding	start	-	5	435	0	6.86	3.6	140.6	2	-2,0	-	-	-1	MINOR
ENSMUSG00000064115	Cadm2	ENSMUST00000141282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039456	Morc3	ENSMUST00000202663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039456	Morc3	ENSMUST00000201497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039456	Morc3	ENSMUST00000044068	ENSMUSP00000040152	TRANSLATION	protein_coding	-	-	5	942	2	11.66	0.5	120.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000039456	Morc3	ENSMUST00000231891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039456	Morc3	ENSMUST00000232425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039456	Morc3	ENSMUST00000232639	ENSMUSP00000156167	TRANSLATION	nonsense_mediated_decay	start	-	-	58	2	1.5	0	34.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039456	Morc3	ENSMUST00000202261	ENSMUSP00000144369	TRANSLATION	protein_coding	-	CCDS79490.1	1	942	2	11.66	0.5	120.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000039456	Morc3	ENSMUST00000201097	ENSMUSP00000144058	TRANSLATION	protein_coding	stop	-	5	397	2	9.41	0	61.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039456	Morc3	ENSMUST00000201706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039456	Morc3	ENSMUST00000201754	ENSMUSP00000144357	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	2.58	0	33	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041247	Lamp3	ENSMUST00000081880	ENSMUSP00000080556	TRANSLATION	protein_coding	-	CCDS37285.1	1	411	0	2.95	0.5	243.5	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000046962	Zbtb21	ENSMUST00000231560	ENSMUSP00000156159	TRANSLATION	protein_coding	stop	-	-	72	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046962	Zbtb21	ENSMUST00000232010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046962	Zbtb21	ENSMUST00000113734	ENSMUSP00000109363	TRANSLATION	protein_coding	-	CCDS37418.1	2	1094	30	2.25	0.5	141.9	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000046962	Zbtb21	ENSMUST00000052089	ENSMUSP00000052127	TRANSLATION	protein_coding	-	CCDS37419.1	1	894	21	2.05	0.5	123.1	0	-4,-7	-	-	10.338	MINOR
ENSMUSG00000046962	Zbtb21	ENSMUST00000231263	ENSMUSP00000156042	TRANSLATION	protein_coding	stop	-	-	212	0	1.65	0	90.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046962	Zbtb21	ENSMUST00000231256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046962	Zbtb21	ENSMUST00000063605	ENSMUSP00000068283	TRANSLATION	protein_coding	-	CCDS37420.1	1	1066	30	2.25	0.5	141.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000046962	Zbtb21	ENSMUST00000232187	ENSMUSP00000156033	TRANSLATION	protein_coding	-	-	-	380	21	1.73	0.5	64	0	-4,-7	-	-	5.94	MINOR
ENSMUSG00000075122	Cd80	ENSMUST00000232409	ENSMUSP00000156252	TRANSLATION	protein_coding	-	-	-	212	0	1.6	0	35	1	0,-3	-	-	5.64	MINOR
ENSMUSG00000075122	Cd80	ENSMUST00000099816	ENSMUSP00000097404	TRANSLATION	protein_coding	-	CCDS28168.1	1	306	0	2.6	0.5	102.5	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000075122	Cd80	ENSMUST00000231716	ENSMUSP00000156031	TRANSLATION	protein_coding	-	CCDS28168.1	-	306	0	2.6	0.5	102.5	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000050272	Dscam	ENSMUST00000056102	ENSMUSP00000056040	TRANSLATION	protein_coding	-	CCDS37415.1	1	2013	0	18.77	2.7	613	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050272	Dscam	ENSMUST00000232829	ENSMUSP00000156602	TRANSLATION	protein_coding	start	-	-	371	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182117	ENSMUSP00000138657	TRANSLATION	protein_coding	start	-	3	126	0	0	0	76.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000183279	ENSMUSP00000138498	TRANSLATION	nonsense_mediated_decay	start	-	3	81	0	0	0	67.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000183101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182671	ENSMUSP00000138160	TRANSLATION	protein_coding	start	-	2	93	0	0	0	76.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182344	ENSMUSP00000138131	TRANSLATION	protein_coding	start	-	3	110	0	0	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182976	ENSMUSP00000138340	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	0	0	76.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041617	Ccdc74a	ENSMUST00000056962	ENSMUSP00000049541	TRANSLATION	protein_coding	-	CCDS49782.1	5	364	0	0	1.5	231.4	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000041617	Ccdc74a	ENSMUST00000182368	ENSMUSP00000138262	TRANSLATION	nonsense_mediated_decay	-	-	5	148	0	0	0	76.5	0	-3,1	-	-	-1	MINOR
ENSMUSG00000041215	Yeats2	ENSMUST00000231861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000231795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000231997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000232054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000231671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041215	Yeats2	ENSMUST00000231705	ENSMUSP00000156060	TRANSLATION	protein_coding	stop	-	-	218	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041215	Yeats2	ENSMUST00000232671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000232172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000090052	ENSMUSP00000087506	TRANSLATION	protein_coding	-	CCDS28043.1	1	1354	0	3.9	0.5	87.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000041215	Yeats2	ENSMUST00000232019	ENSMUSP00000155892	TRANSLATION	protein_coding	start	-	-	1369	0	3.9	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041215	Yeats2	ENSMUST00000232613	ENSMUSP00000156314	TRANSLATION	nonsense_mediated_decay	start	-	-	142	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041215	Yeats2	ENSMUST00000232094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041215	Yeats2	ENSMUST00000232338	ENSMUSP00000155891	TRANSLATION	nonsense_mediated_decay	-	-	-	844	0	3.9	0	87.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041215	Yeats2	ENSMUST00000115560	ENSMUSP00000111222	TRANSLATION	protein_coding	-	CCDS49790.1	5	1407	0	3.9	0.5	87.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000091972	Tmem207	ENSMUST00000165687	ENSMUSP00000127563	TRANSLATION	protein_coding	-	CCDS49813.1	2	143	0	0	3.9	29.2	0	-3,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000091972	Tmem207	ENSMUST00000231658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059003	Grin2a	ENSMUST00000156482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059003	Grin2a	ENSMUST00000197242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059003	Grin2a	ENSMUST00000115835	ENSMUSP00000111501	TRANSLATION	protein_coding	-	CCDS27943.1	5	1464	12	11	6.3	1142.3	3	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000059003	Grin2a	ENSMUST00000032331	ENSMUSP00000032331	TRANSLATION	protein_coding	-	CCDS27943.1	1	1464	12	11	6.3	1142.3	3	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000059003	Grin2a	ENSMUST00000199267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059003	Grin2a	ENSMUST00000199708	ENSMUSP00000142900	TRANSLATION	protein_coding	-	CCDS27943.1	5	1464	12	11	6.3	1142.3	3	1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000005251	Ripk4	ENSMUST00000019386	ENSMUSP00000019386	TRANSLATION	protein_coding	-	CCDS28360.1	1	786	20	4.42	3.9	390.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022897	Dyrk1a	ENSMUST00000023614	ENSMUSP00000023614	TRANSLATION	protein_coding	-	CCDS28350.1	5	763	17	6.33	8.8	169.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022897	Dyrk1a	ENSMUST00000119878	ENSMUSP00000113660	TRANSLATION	protein_coding	-	CCDS28350.1	5	763	17	6.33	8.8	169.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022897	Dyrk1a	ENSMUST00000155791	ENSMUSP00000119669	TRANSLATION	protein_coding	stop	-	5	181	7	1.33	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022897	Dyrk1a	ENSMUST00000134383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022897	Dyrk1a	ENSMUST00000139250	ENSMUSP00000120344	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022897	Dyrk1a	ENSMUST00000122284	ENSMUSP00000112853	TRANSLATION	protein_coding	-	-	5	725	17	6.33	2.9	169.7	0	-4,-2	-	-	18.732	MINOR
ENSMUSG00000040605	Bace2	ENSMUST00000231783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040605	Bace2	ENSMUST00000231664	ENSMUSP00000156270	TRANSLATION	nonsense_mediated_decay	start	-	-	118	0	2	0	36.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040605	Bace2	ENSMUST00000231892	ENSMUSP00000155906	TRANSLATION	protein_coding	start	-	-	53	2	1.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040605	Bace2	ENSMUST00000047275	ENSMUSP00000043918	TRANSLATION	protein_coding	-	CCDS28359.1	1	514	5	8.5	0.5	153.6	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000075395	A630010A05Rik	ENSMUST00000100165	ENSMUSP00000097741	TRANSLATION	protein_coding	stop	-	5	228	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075395	A630010A05Rik	ENSMUST00000147024	ENSMUSP00000122979	TRANSLATION	protein_coding	stop	-	1	232	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000075395	A630010A05Rik	ENSMUST00000129643	ENSMUSP00000116904	TRANSLATION	protein_coding	-	-	5	638	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000022523	Fgf12	ENSMUST00000100024	ENSMUSP00000097601	TRANSLATION	protein_coding	-	CCDS28092.1	1	243	0	5	17.5	137.1	0	-4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000022523	Fgf12	ENSMUST00000231399	ENSMUSP00000156108	TRANSLATION	protein_coding	stop	-	-	171	0	3.2	0	137.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022523	Fgf12	ENSMUST00000231429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022523	Fgf12	ENSMUST00000232632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022523	Fgf12	ENSMUST00000231717	ENSMUSP00000156274	TRANSLATION	protein_coding	-	-	-	115	0	2	0.5	26.7	0	-4,-1	-	-	0	MINOR
ENSMUSG00000022523	Fgf12	ENSMUST00000232352	ENSMUSP00000155924	TRANSLATION	protein_coding	-	-	-	181	0	4	17.5	137.1	0	-4,-5	-	-	14.002	MINOR
ENSMUSG00000014075	Tctex1d2	ENSMUST00000080316	ENSMUSP00000079194	TRANSLATION	protein_coding	-	CCDS84222.1	1	104	0	0.42	0.5	0	0	-4,-5	-	-	1.398	MINOR
ENSMUSG00000014075	Tctex1d2	ENSMUST00000131204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014075	Tctex1d2	ENSMUST00000014220	ENSMUSP00000014220	TRANSLATION	protein_coding	-	CCDS37312.1	1	144	0	1.8	3.9	91.6	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000022723	Crybg3	ENSMUST00000044604	ENSMUSP00000037682	TRANSLATION	protein_coding	-	-	1	1238	17	9.0768	0.5	388.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000022723	Crybg3	ENSMUST00000139989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022723	Crybg3	ENSMUST00000232544	ENSMUSP00000156062	TRANSLATION	protein_coding	start/stop	-	-	254	16	3.252	0	140.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022723	Crybg3	ENSMUST00000129762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022723	Crybg3	ENSMUST00000172910	ENSMUSP00000156047	TRANSLATION	protein_coding	-	-	5	2952	17	9.0768	0.5	386.9	0	-4,0	-	-	17.904	ALTERNATIVE:2
ENSMUSG00000022723	Crybg3	ENSMUST00000129350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071562	Stfa1	ENSMUST00000042097	ENSMUSP00000049068	TRANSLATION	protein_coding	-	-	1	128	0	2.25	0	60.6	0	-4,-5	-	-	9.27	MINOR
ENSMUSG00000071562	Stfa1	ENSMUST00000232150	ENSMUSP00000156337	TRANSLATION	protein_coding	-	CCDS37331.1	-	97	0	2.75	1.5	83.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022905	Kpna1	ENSMUST00000174737	ENSMUSP00000133852	TRANSLATION	nonsense_mediated_decay	start	-	5	98	0	2.55	0	75.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022905	Kpna1	ENSMUST00000172534	ENSMUSP00000134037	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022905	Kpna1	ENSMUST00000173715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022905	Kpna1	ENSMUST00000004054	ENSMUSP00000004054	TRANSLATION	protein_coding	-	CCDS28144.1	1	538	0	12.91	15	456.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022905	Kpna1	ENSMUST00000173641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022905	Kpna1	ENSMUST00000173696	ENSMUSP00000134534	TRANSLATION	nonsense_mediated_decay	-	-	5	182	0	5.08	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022905	Kpna1	ENSMUST00000174500	ENSMUSP00000133819	TRANSLATION	nonsense_mediated_decay	-	-	5	145	0	4.08	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022905	Kpna1	ENSMUST00000173555	ENSMUSP00000133318	TRANSLATION	protein_coding	stop	-	5	119	0	3.33	0	94.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022905	Kpna1	ENSMUST00000173469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022905	Kpna1	ENSMUST00000172991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022766	Serpind1	ENSMUST00000023450	ENSMUSP00000023450	TRANSLATION	protein_coding	-	CCDS28000.1	1	478	0	4	1.5	359.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000022766	Serpind1	ENSMUST00000231884	ENSMUSP00000156303	TRANSLATION	protein_coding	-	CCDS28000.1	-	478	0	4	1.5	359.4	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046748	Tmem45a2	ENSMUST00000227043	ENSMUSP00000154589	TRANSLATION	protein_coding	-	CCDS49875.1	-	289	0	0	0.5	88.7	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046748	Tmem45a2	ENSMUST00000226147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046748	Tmem45a2	ENSMUST00000067173	ENSMUSP00000070137	TRANSLATION	protein_coding	-	CCDS49875.1	2	289	0	0	0.5	88.7	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022799	Arhgap31	ENSMUST00000124866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022799	Arhgap31	ENSMUST00000023487	ENSMUSP00000023487	TRANSLATION	protein_coding	-	CCDS28172.1	1	1425	0	5.35	1.5	152.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022799	Arhgap31	ENSMUST00000132697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075254	Heg1	ENSMUST00000126532	ENSMUSP00000119790	TRANSLATION	protein_coding	-	-	5	1337	6	2	0	62.2	0	3,-2	-	-	18	PRINCIPAL:5
ENSMUSG00000075254	Heg1	ENSMUST00000146518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075254	Heg1	ENSMUST00000132797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075254	Heg1	ENSMUST00000232568	ENSMUSP00000155944	TRANSLATION	protein_coding	-	-	-	1313	6	2	0.5	62.2	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000075254	Heg1	ENSMUST00000154863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075254	Heg1	ENSMUST00000152832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075254	Heg1	ENSMUST00000128105	ENSMUSP00000155963	TRANSLATION	protein_coding	-	-	1	138	0	0	0	0	0	-1,-5	-	-	0	MINOR
ENSMUSG00000075254	Heg1	ENSMUST00000152782	ENSMUSP00000123686	TRANSLATION	protein_coding	-	-	5	1082	6	2	0.5	62.2	0	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000021018	Polr2h	ENSMUST00000021405	ENSMUSP00000021405	TRANSLATION	protein_coding	-	CCDS28058.1	1	150	0	4.41	18.3	183.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000021018	Polr2h	ENSMUST00000161038	ENSMUSP00000155920	TRANSLATION	protein_coding	stop	-	5	108	0	3.33	0	123.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000021018	Polr2h	ENSMUST00000231656	ENSMUSP00000155895	TRANSLATION	protein_coding	-	-	-	91	0	1.73	0	63.6	0	-4,-5	-	-	0.642	MINOR
ENSMUSG00000021018	Polr2h	ENSMUST00000231392	ENSMUSP00000155967	TRANSLATION	protein_coding	-	-	-	143	0	3.66	0	149.6	0	0,-5	-	-	8.49	MINOR
ENSMUSG00000051728	Fam243	ENSMUST00000062638	ENSMUSP00000049694	TRANSLATION	protein_coding	-	CCDS28335.1	-	251	0	0	6.3	0	0	-4,-1	-	-	2	PRINCIPAL:1
ENSMUSG00000022868	Ahsg	ENSMUST00000232098	ENSMUSP00000156219	TRANSLATION	protein_coding	-	-	-	266	0	0	0	68.8	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000022868	Ahsg	ENSMUST00000231848	ENSMUSP00000156233	TRANSLATION	protein_coding	-	-	-	294	0	0	0	68.8	0	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000022868	Ahsg	ENSMUST00000231932	ENSMUSP00000156181	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000022868	Ahsg	ENSMUST00000023583	ENSMUSP00000023583	TRANSLATION	protein_coding	-	CCDS28071.1	1	345	0	0	0.5	68.8	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000022868	Ahsg	ENSMUST00000231328	ENSMUSP00000156266	TRANSLATION	protein_coding	-	-	-	301	0	0	0	68.8	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000022868	Ahsg	ENSMUST00000232377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022868	Ahsg	ENSMUST00000232556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022868	Ahsg	ENSMUST00000232674	ENSMUSP00000155875	TRANSLATION	protein_coding	start	-	-	115	0	0	0	58.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047960	Olfr186	ENSMUST00000216415	ENSMUSP00000150366	TRANSLATION	protein_coding	-	CCDS28242.1	5	309	0	0	2.7	162	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047960	Olfr186	ENSMUST00000206463	ENSMUSP00000146214	TRANSLATION	protein_coding	-	CCDS28242.1	3	309	0	0	2.7	162	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047960	Olfr186	ENSMUST00000062380	ENSMUSP00000056448	TRANSLATION	protein_coding	-	CCDS28242.1	-	309	0	0	2.7	162	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090223	Pcp4	ENSMUST00000061739	ENSMUSP00000062539	TRANSLATION	protein_coding	-	CCDS37414.1	1	62	0	1.5	13.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000090223	Pcp4	ENSMUST00000232906	ENSMUSP00000156426	TRANSLATION	nonsense_mediated_decay	start	-	-	24	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090223	Pcp4	ENSMUST00000233816	ENSMUSP00000156398	TRANSLATION	protein_coding	start	-	-	125	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090223	Pcp4	ENSMUST00000233216	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033157	Abhd10	ENSMUST00000128348	ENSMUSP00000120653	TRANSLATION	nonsense_mediated_decay	-	-	2	51	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000033157	Abhd10	ENSMUST00000143731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033157	Abhd10	ENSMUST00000066983	ENSMUSP00000065282	TRANSLATION	protein_coding	-	CCDS28201.1	1	297	9	2.79	1.5	29.5	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000033157	Abhd10	ENSMUST00000155741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033157	Abhd10	ENSMUST00000138517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075704	Txnrd2	ENSMUST00000149937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075704	Txnrd2	ENSMUST00000144233	ENSMUSP00000145926	TRANSLATION	protein_coding	stop	-	5	165	24	4.5	0	32.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000126330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075704	Txnrd2	ENSMUST00000115606	ENSMUSP00000111269	TRANSLATION	protein_coding	-	CCDS79434.1	1	527	60	14.06	0.5	180.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000075704	Txnrd2	ENSMUST00000156604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075704	Txnrd2	ENSMUST00000177856	ENSMUSP00000136402	TRANSLATION	protein_coding	-	-	5	522	56	13.73	2.9	169.8	0	-4,0	-	-	14.052	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000206151	ENSMUSP00000146030	TRANSLATION	protein_coding	-	CCDS79434.1	5	527	60	14.06	0.5	180.2	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000075704	Txnrd2	ENSMUST00000126778	ENSMUSP00000145730	TRANSLATION	protein_coding	-	-	1	101	17	2.45	0	32.3	0	-4,-6	-	-	0	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000138310	ENSMUSP00000146174	TRANSLATION	protein_coding	start	-	3	96	7	1.62	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000178093	ENSMUSP00000136373	TRANSLATION	protein_coding	-	-	5	491	54	12.73	0	134	0	-4,0	-	-	8.568	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000205679	ENSMUSP00000146311	TRANSLATION	protein_coding	-	-	5	505	54	13.31	0	151.8	0	-3,1	-	-	10.794	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000153457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075704	Txnrd2	ENSMUST00000131303	ENSMUSP00000146096	TRANSLATION	protein_coding	start	-	2	123	22	2.65	0	32.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000115604	ENSMUSP00000111267	TRANSLATION	protein_coding	-	-	1	359	49	8.14	0	80.7	0	-4,0	-	-	0.03	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000115605	ENSMUSP00000111268	TRANSLATION	nonsense_mediated_decay	-	-	5	466	54	12.23	0	119.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000075704	Txnrd2	ENSMUST00000206606	ENSMUSP00000146143	TRANSLATION	protein_coding	-	-	1	496	58	13.06	0	144.4	0	-4,0	-	-	12.522	MINOR
ENSMUSG00000004843	Chmp2b	ENSMUST00000231259	ENSMUSP00000156381	TRANSLATION	protein_coding	-	-	-	209	0	2.48	0	147.9	0	-4,-6	-	-	11.55	MINOR
ENSMUSG00000004843	Chmp2b	ENSMUST00000004965	ENSMUSP00000004965	TRANSLATION	protein_coding	-	CCDS28269.1	1	213	0	2.68	19.5	147.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000044029	Olfr178	ENSMUST00000206523	ENSMUSP00000145885	TRANSLATION	protein_coding	-	CCDS28238.1	3	319	0	0.2	1.5	165.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044029	Olfr178	ENSMUST00000215032	ENSMUSP00000148922	TRANSLATION	protein_coding	-	CCDS28238.1	5	319	0	0.2	1.5	165.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044029	Olfr178	ENSMUST00000058564	ENSMUSP00000049578	TRANSLATION	protein_coding	-	CCDS28238.1	-	319	0	0.2	1.5	165.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071632	2510002D24Rik	ENSMUST00000123146	ENSMUSP00000140943	TRANSLATION	protein_coding	-	-	1	71	0	0	0	43.7	0	-4,-7	-	-	5.298	MINOR
ENSMUSG00000071632	2510002D24Rik	ENSMUST00000191388	ENSMUSP00000141071	TRANSLATION	protein_coding	-	-	5	49	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000071632	2510002D24Rik	ENSMUST00000055413	ENSMUSP00000060363	TRANSLATION	protein_coding	-	CCDS28029.1	1	105	0	0	3.9	49.5	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000071632	2510002D24Rik	ENSMUST00000190776	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094430	Smbd1	ENSMUST00000179384	ENSMUSP00000137187	TRANSLATION	protein_coding	-	CCDS57028.1	2	141	0	0	1.5	0	0	2,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000022680	Pdxdc1	ENSMUST00000148551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000115804	ENSMUSP00000111471	TRANSLATION	protein_coding	-	CCDS37261.1	1	710	0	5.395	0.5	38.3	0	-4,-5	-	-	11.772	PRINCIPAL:3
ENSMUSG00000022680	Pdxdc1	ENSMUST00000144913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000127432	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000115803	ENSMUSP00000111469	TRANSLATION	protein_coding	stop	-	5	378	0	4.495	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022680	Pdxdc1	ENSMUST00000154150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022680	Pdxdc1	ENSMUST00000152450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000150435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000115802	ENSMUSP00000111468	TRANSLATION	protein_coding	-	-	1	384	0	4.48	0	39.8	0	-4,-5	-	-	10.17	MINOR
ENSMUSG00000022680	Pdxdc1	ENSMUST00000151774	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022680	Pdxdc1	ENSMUST00000139859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022680	Pdxdc1	ENSMUST00000137715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022680	Pdxdc1	ENSMUST00000023361	ENSMUSP00000023361	TRANSLATION	protein_coding	-	CCDS70685.1	1	789	0	5.395	0.5	38.3	0	-4,-5	-	-	11.772	ALTERNATIVE:2
ENSMUSG00000022680	Pdxdc1	ENSMUST00000148848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022680	Pdxdc1	ENSMUST00000124860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090356	Teddm3	ENSMUST00000170665	ENSMUSP00000141078	TRANSLATION	protein_coding	-	CCDS79440.1	-	294	0	0	1.5	55.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050239	Krtap24-1	ENSMUST00000052512	ENSMUSP00000052005	TRANSLATION	protein_coding	-	CCDS49890.1	-	248	0	0	1.5	97.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000055789	Ftdc2	ENSMUST00000053249	ENSMUSP00000056475	TRANSLATION	protein_coding	-	CCDS28232.1	1	192	0	2.04	0.5	36.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068428	Gmnc	ENSMUST00000231299	ENSMUSP00000156264	TRANSLATION	protein_coding	-	-	-	291	0	1.75	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000068428	Gmnc	ENSMUST00000231969	ENSMUSP00000156070	TRANSLATION	protein_coding	-	-	-	333	0	1.75	3.9	0	0	-4,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000068428	Gmnc	ENSMUST00000089832	ENSMUSP00000087269	TRANSLATION	protein_coding	-	CCDS37304.1	1	339	0	1.75	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000068428	Gmnc	ENSMUST00000231417	ENSMUSP00000155982	TRANSLATION	nonsense_mediated_decay	start	-	-	110	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063445	Nmral1	ENSMUST00000115851	ENSMUSP00000111517	TRANSLATION	protein_coding	-	CCDS70679.1	1	291	23	3.5	0.5	51.6	0	-3,-6	-	-	14.106	MINOR
ENSMUSG00000063445	Nmral1	ENSMUST00000125140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063445	Nmral1	ENSMUST00000124977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063445	Nmral1	ENSMUST00000074970	ENSMUSP00000074500	TRANSLATION	protein_coding	-	CCDS70680.1	1	243	23	3.5	0.5	51.6	0	-3,-6	-	-	14.106	MINOR
ENSMUSG00000063445	Nmral1	ENSMUST00000079130	ENSMUSP00000078132	TRANSLATION	protein_coding	-	CCDS27923.1	1	309	23	5.448	1.5	48	0	-3,-6	-	-	17.733	MINOR
ENSMUSG00000063445	Nmral1	ENSMUST00000120056	ENSMUSP00000112754	TRANSLATION	protein_coding	-	CCDS70678.1	1	299	23	5.25	10.8	51.6	0	-3,-6	-	-	20.604	PRINCIPAL:1
ENSMUSG00000055692	Tmem191c	ENSMUST00000232031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000231347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232364	ENSMUSP00000156052	TRANSLATION	protein_coding	start/stop	-	-	123	2	0	0	87.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055692	Tmem191c	ENSMUST00000231322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232167	ENSMUSP00000156287	TRANSLATION	protein_coding	start	-	-	129	0	0	0	92.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055692	Tmem191c	ENSMUST00000231638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000231334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000231517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000164950	ENSMUSP00000131127	TRANSLATION	protein_coding	-	CCDS49776.1	3	302	0	0	2.7	217.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055692	Tmem191c	ENSMUST00000231646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055692	Tmem191c	ENSMUST00000232636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034158	Lrrc58	ENSMUST00000078717	ENSMUSP00000077779	TRANSLATION	protein_coding	-	CCDS37340.1	1	366	0	2.48	2.7	71.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022800	Fyttd1	ENSMUST00000120345	ENSMUSP00000113541	TRANSLATION	protein_coding	-	-	5	129	0	0	0	218.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022800	Fyttd1	ENSMUST00000232272	ENSMUSP00000155929	TRANSLATION	protein_coding	-	-	-	199	0	0	0	361.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022800	Fyttd1	ENSMUST00000137863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000232300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000141590	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000127493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000145146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022800	Fyttd1	ENSMUST00000135854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000171325	ENSMUSP00000131446	TRANSLATION	protein_coding	-	CCDS49833.1	1	283	0	0	0.5	346.4	0	-4,-2	-	-	0	MINOR
ENSMUSG00000022800	Fyttd1	ENSMUST00000125843	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022800	Fyttd1	ENSMUST00000149183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022800	Fyttd1	ENSMUST00000143151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022800	Fyttd1	ENSMUST00000023489	ENSMUSP00000023489	TRANSLATION	protein_coding	-	CCDS28125.1	1	317	0	0	5.3	575.6	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000022800	Fyttd1	ENSMUST00000231751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044626	Liph	ENSMUST00000232673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044626	Liph	ENSMUST00000060673	ENSMUSP00000062310	TRANSLATION	protein_coding	-	CCDS37296.1	1	451	7	5.57	6.3	267.6	0	2,-4	-	-	20	PRINCIPAL:2
ENSMUSG00000044626	Liph	ENSMUST00000231766	ENSMUSP00000156378	TRANSLATION	protein_coding	-	-	-	449	7	5.57	6.3	263.2	0	2,-4	-	-	19.736	ALTERNATIVE:1
ENSMUSG00000044626	Liph	ENSMUST00000074230	ENSMUSP00000073853	TRANSLATION	protein_coding	-	CCDS37295.1	1	421	7	4.82	1.7	168.3	0	2,-4	-	-	10.806	MINOR
ENSMUSG00000044626	Liph	ENSMUST00000232120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044626	Liph	ENSMUST00000231682	ENSMUSP00000155902	TRANSLATION	nonsense_mediated_decay	-	-	-	146	1	0.48	0	60.5	0	2,-4	-	-	-1	MINOR
ENSMUSG00000022774	Ncbp2	ENSMUST00000126215	ENSMUSP00000156386	TRANSLATION	protein_coding	-	-	5	165	3	2.95	0	61.5	0	-4,-5	-	-	13.902	MINOR
ENSMUSG00000022774	Ncbp2	ENSMUST00000023460	ENSMUSP00000023460	TRANSLATION	protein_coding	-	CCDS28110.1	1	156	3	3.5	12.8	61.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000022774	Ncbp2	ENSMUST00000115178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022774	Ncbp2	ENSMUST00000140965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022683	Pla2g10	ENSMUST00000115807	ENSMUSP00000111474	TRANSLATION	protein_coding	-	CCDS70684.1	1	144	3	2.66	0.5	82.8	0	3,-2	-	-	11.742	MINOR
ENSMUSG00000022683	Pla2g10	ENSMUST00000023364	ENSMUSP00000023364	TRANSLATION	protein_coding	-	CCDS27967.1	1	151	5	3.5	0.5	109.1	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000022683	Pla2g10	ENSMUST00000156504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022683	Pla2g10	ENSMUST00000127780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047141	Zfp654	ENSMUST00000207826	ENSMUSP00000146656	TRANSLATION	protein_coding	-	CCDS84250.1	5	1112	20	0	0.5	19.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047141	Zfp654	ENSMUST00000052588	ENSMUSP00000052946	TRANSLATION	protein_coding	-	-	1	571	18	0	0.5	19.4	0	-4,-5	-	-	10.668	MINOR
ENSMUSG00000022698	Naa50	ENSMUST00000159514	ENSMUSP00000125517	TRANSLATION	protein_coding	-	-	1	175	22	3.75	0	52.7	0	-4,-5	-	-	18	MINOR
ENSMUSG00000022698	Naa50	ENSMUST00000063520	ENSMUSP00000070140	TRANSLATION	protein_coding	-	CCDS28183.1	1	168	22	3.75	18.3	52.7	0	-4,-5	-	-	22	PRINCIPAL:3
ENSMUSG00000022698	Naa50	ENSMUST00000063542	ENSMUSP00000067361	TRANSLATION	protein_coding	-	-	1	129	16	2.75	0	29.2	0	-4,-5	-	-	9.324	MINOR
ENSMUSG00000022698	Naa50	ENSMUST00000161326	ENSMUSP00000124291	TRANSLATION	protein_coding	-	CCDS84236.1	1	169	22	3.75	18.3	52.7	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000025613	Cct8	ENSMUST00000177485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025613	Cct8	ENSMUST00000176589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025613	Cct8	ENSMUST00000177301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025613	Cct8	ENSMUST00000175750	ENSMUSP00000134920	TRANSLATION	protein_coding	start/stop	-	5	239	8	6	0	228.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025613	Cct8	ENSMUST00000176750	ENSMUSP00000135830	TRANSLATION	protein_coding	stop	-	2	132	10	3.25	0	133.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025613	Cct8	ENSMUST00000177376	ENSMUSP00000135498	TRANSLATION	nonsense_mediated_decay	-	-	5	71	3	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025613	Cct8	ENSMUST00000026704	ENSMUSP00000026704	TRANSLATION	protein_coding	-	CCDS37384.1	1	548	24	14.58	19	512.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025613	Cct8	ENSMUST00000175977	ENSMUSP00000135651	TRANSLATION	protein_coding	-	-	5	489	21	13.83	0	339.2	0	-4,-6	-	-	8.502	MINOR
ENSMUSG00000025613	Cct8	ENSMUST00000176041	ENSMUSP00000135377	TRANSLATION	protein_coding	stop	-	5	158	10	4	0	153.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025613	Cct8	ENSMUST00000176241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038094	Atp13a4	ENSMUST00000182694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038094	Atp13a4	ENSMUST00000182013	ENSMUSP00000138583	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	0	0	90.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000038094	Atp13a4	ENSMUST00000182168	ENSMUSP00000138515	TRANSLATION	nonsense_mediated_decay	start	-	5	87	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038094	Atp13a4	ENSMUST00000039090	ENSMUSP00000048753	TRANSLATION	protein_coding	-	CCDS49817.1	1	878	4	7.872	0.5	283.5	7	-4,-6	-	-	10.002	MINOR
ENSMUSG00000038094	Atp13a4	ENSMUST00000182676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038094	Atp13a4	ENSMUST00000182824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038094	Atp13a4	ENSMUST00000182357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038094	Atp13a4	ENSMUST00000182573	ENSMUSP00000138700	TRANSLATION	nonsense_mediated_decay	start	-	5	576	5	7.852	0	78.2	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000038094	Atp13a4	ENSMUST00000182627	ENSMUSP00000138479	TRANSLATION	protein_coding	-	CCDS49816.1	5	1193	6	11.36	1.5	283.5	13	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038094	Atp13a4	ENSMUST00000182094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038094	Atp13a4	ENSMUST00000057018	ENSMUSP00000060987	TRANSLATION	protein_coding	-	CCDS59623.1	1	1174	6	11.06	0.5	242.3	11	-4,-6	-	-	14.928	MINOR
ENSMUSG00000023143	Nagpa	ENSMUST00000023911	ENSMUSP00000023911	TRANSLATION	protein_coding	-	CCDS27933.1	1	517	0	1.1	1.5	132.3	1	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000023143	Nagpa	ENSMUST00000156450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023143	Nagpa	ENSMUST00000144490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023143	Nagpa	ENSMUST00000147567	ENSMUSP00000117051	TRANSLATION	protein_coding	-	-	1	374	0	1.1	0	118.8	1	-4,-5	-	-	11.19	ALTERNATIVE:2
ENSMUSG00000022652	Morc1	ENSMUST00000232195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022652	Morc1	ENSMUST00000232256	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022652	Morc1	ENSMUST00000023330	ENSMUSP00000023330	TRANSLATION	protein_coding	-	CCDS37351.1	1	950	9	5.97	0.5	116.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022668	Gtpbp8	ENSMUST00000162512	ENSMUSP00000125352	TRANSLATION	protein_coding	-	CCDS28188.1	1	285	26	3.69	1.5	67.9	0	-4,0	-	-	17.922	PRINCIPAL:1
ENSMUSG00000022668	Gtpbp8	ENSMUST00000161436	ENSMUSP00000123974	TRANSLATION	protein_coding	start	-	5	234	19	2.69	0	26.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022668	Gtpbp8	ENSMUST00000023348	ENSMUSP00000023348	TRANSLATION	protein_coding	-	CCDS49855.1	1	218	14	3.37	0.5	68.8	0	-4,0	-	-	11.358	MINOR
ENSMUSG00000022668	Gtpbp8	ENSMUST00000162479	ENSMUSP00000124621	TRANSLATION	nonsense_mediated_decay	start	-	3	147	19	1.44	0	26.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002847	Pla1a	ENSMUST00000232224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002847	Pla1a	ENSMUST00000002926	ENSMUSP00000002926	TRANSLATION	protein_coding	-	CCDS28166.1	1	456	7	5.52	2.9	362.5	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000014301	Pam16	ENSMUST00000131250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014301	Pam16	ENSMUST00000229767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014301	Pam16	ENSMUST00000156889	ENSMUSP00000119723	TRANSLATION	nonsense_mediated_decay	-	-	3	39	0	0	0	38.7	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000014301	Pam16	ENSMUST00000014445	ENSMUSP00000014445	TRANSLATION	protein_coding	-	CCDS37241.1	1	125	0	1.4066	10.8	201.5	0	-3,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000014301	Pam16	ENSMUST00000139534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022978	Mis18a	ENSMUST00000129171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022978	Mis18a	ENSMUST00000147546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022978	Mis18a	ENSMUST00000099554	ENSMUSP00000097150	TRANSLATION	protein_coding	-	CCDS28316.1	1	204	4	1.44	0.5	104.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000022500	Litaf	ENSMUST00000162323	ENSMUSP00000123948	TRANSLATION	protein_coding	stop	-	3	97	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022500	Litaf	ENSMUST00000230709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022500	Litaf	ENSMUST00000140170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022500	Litaf	ENSMUST00000117360	ENSMUSP00000112667	TRANSLATION	protein_coding	-	CCDS27958.1	3	161	3	0	7.5	90	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022500	Litaf	ENSMUST00000023143	ENSMUSP00000023143	TRANSLATION	protein_coding	-	CCDS27958.1	1	161	3	0	7.5	90	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022861	Dgkg	ENSMUST00000150553	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022861	Dgkg	ENSMUST00000137311	ENSMUSP00000114441	TRANSLATION	nonsense_mediated_decay	-	-	1	392	16	5.13	0	252.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022861	Dgkg	ENSMUST00000023578	ENSMUSP00000023578	TRANSLATION	protein_coding	-	CCDS84217.1	1	749	16	4.93	1.5	538.2	0	-4,-5	-	-	17.598	ALTERNATIVE:2
ENSMUSG00000022861	Dgkg	ENSMUST00000089925	ENSMUSP00000087371	TRANSLATION	protein_coding	-	CCDS28068.1	1	788	16	4.99	1.5	538.2	0	-4,-5	-	-	17.718	PRINCIPAL:3
ENSMUSG00000022861	Dgkg	ENSMUST00000231249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003526	Prodh	ENSMUST00000003620	ENSMUSP00000003620	TRANSLATION	protein_coding	-	CCDS37278.1	1	599	28	4.028	5.1	0	0	1,2	-	-	14	PRINCIPAL:1
ENSMUSG00000003526	Prodh	ENSMUST00000232554	ENSMUSP00000156221	TRANSLATION	protein_coding	start/stop	-	-	157	17	1.95	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003526	Prodh	ENSMUST00000126087	ENSMUSP00000121736	TRANSLATION	protein_coding	start/stop	-	5	244	28	3.308	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003526	Prodh	ENSMUST00000132241	ENSMUSP00000118264	TRANSLATION	protein_coding	start	-	2	115	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003526	Prodh	ENSMUST00000232384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003526	Prodh	ENSMUST00000123969	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003526	Prodh	ENSMUST00000141635	ENSMUSP00000122889	TRANSLATION	nonsense_mediated_decay	start	-	2	63	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003526	Prodh	ENSMUST00000232502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003526	Prodh	ENSMUST00000139861	ENSMUSP00000123223	TRANSLATION	protein_coding	-	-	1	105	0	0	0	0	0	1,2	-	-	0	MINOR
ENSMUSG00000003526	Prodh	ENSMUST00000136776	ENSMUSP00000117597	TRANSLATION	protein_coding	-	-	5	497	28	4.028	1	0	0	-4,-5	-	-	12	MINOR
ENSMUSG00000059657	Stfa2l1	ENSMUST00000079184	ENSMUSP00000078181	TRANSLATION	protein_coding	-	CCDS28149.1	1	103	0	2.75	1.5	78.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000105231	Iglj3	ENSMUST00000200211	ENSMUSP00000142359	TRANSLATION	IG_J_gene	start/stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000022749	Tbc1d23	ENSMUST00000231435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022749	Tbc1d23	ENSMUST00000226586	ENSMUSP00000154535	TRANSLATION	protein_coding	-	-	-	699	0	1.968	5.1	99.3	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000022749	Tbc1d23	ENSMUST00000226486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022749	Tbc1d23	ENSMUST00000227359	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022749	Tbc1d23	ENSMUST00000228172	ENSMUSP00000153899	TRANSLATION	nonsense_mediated_decay	-	-	-	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022749	Tbc1d23	ENSMUST00000231391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022749	Tbc1d23	ENSMUST00000226678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022749	Tbc1d23	ENSMUST00000227681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022749	Tbc1d23	ENSMUST00000227531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022749	Tbc1d23	ENSMUST00000023431	ENSMUSP00000023431	TRANSLATION	protein_coding	-	CCDS28228.1	1	684	0	1.968	5.1	99.3	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000022807	Osbpl11	ENSMUST00000039733	ENSMUSP00000039632	TRANSLATION	protein_coding	-	CCDS28128.1	1	757	0	5.49	2.9	308.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000022807	Osbpl11	ENSMUST00000232100	ENSMUSP00000155970	TRANSLATION	protein_coding	-	-	-	751	0	5.49	0	308.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000022807	Osbpl11	ENSMUST00000231617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022807	Osbpl11	ENSMUST00000232181	ENSMUSP00000155873	TRANSLATION	protein_coding	-	CCDS28128.1	-	757	0	5.49	2.9	308.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000022757	Tfg	ENSMUST00000121554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022757	Tfg	ENSMUST00000128551	ENSMUSP00000119561	TRANSLATION	protein_coding	stop	-	5	103	0	0	0	48.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022757	Tfg	ENSMUST00000065515	ENSMUSP00000067867	TRANSLATION	protein_coding	-	CCDS28224.1	1	397	0	0	1.5	48.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022757	Tfg	ENSMUST00000141404	ENSMUSP00000117405	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022757	Tfg	ENSMUST00000127994	ENSMUSP00000121564	TRANSLATION	protein_coding	start	-	5	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022757	Tfg	ENSMUST00000136394	ENSMUSP00000120677	TRANSLATION	protein_coding	stop	-	1	131	0	0	0	48.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036172	Cd200r3	ENSMUST00000114612	ENSMUSP00000110259	TRANSLATION	protein_coding	-	-	1	211	0	0.8	0.5	0	3	2,-3	-	-	2.664	MINOR
ENSMUSG00000036172	Cd200r3	ENSMUST00000077178	ENSMUSP00000076421	TRANSLATION	protein_coding	-	-	1	223	0	0.8	0	0	3	2,-3	-	-	2.664	MINOR
ENSMUSG00000036172	Cd200r3	ENSMUST00000166731	ENSMUSP00000128974	TRANSLATION	protein_coding	-	-	1	273	0	1.8	0.5	0	3	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000036172	Cd200r3	ENSMUST00000164007	ENSMUSP00000130480	TRANSLATION	protein_coding	-	CCDS49857.1	1	275	0	1.8	0.5	0	3	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000036172	Cd200r3	ENSMUST00000171779	ENSMUSP00000132938	TRANSLATION	protein_coding	-	CCDS49859.1	1	202	0	0.8	0.5	0	3	2,-3	-	-	2.664	MINOR
ENSMUSG00000036172	Cd200r3	ENSMUST00000114611	ENSMUSP00000110258	TRANSLATION	protein_coding	-	CCDS49856.1	1	278	0	1.8	0.5	0	3	2,-3	-	-	6	PRINCIPAL:4
ENSMUSG00000036172	Cd200r3	ENSMUST00000114613	ENSMUSP00000110260	TRANSLATION	protein_coding	-	-	1	284	0	1.8	0.5	0	3	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000036172	Cd200r3	ENSMUST00000048479	ENSMUSP00000036624	TRANSLATION	protein_coding	-	-	1	296	0	1.8	0	0	3	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000036172	Cd200r3	ENSMUST00000114622	ENSMUSP00000110269	TRANSLATION	protein_coding	-	CCDS49858.1	1	205	0	0.8	0.5	0	3	2,-3	-	-	2.664	MINOR
ENSMUSG00000036172	Cd200r3	ENSMUST00000163358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050058	Prm3	ENSMUST00000050864	ENSMUSP00000059630	TRANSLATION	protein_coding	-	CCDS27954.1	-	101	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000054604	Cggbp1	ENSMUST00000067744	ENSMUSP00000065845	TRANSLATION	protein_coding	-	CCDS28266.1	1	167	4	0	14.8	0	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000054604	Cggbp1	ENSMUST00000136532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116542	Gm17783	ENSMUST00000232600	ENSMUSP00000155928	TRANSLATION	protein_coding	-	-	-	320	0	1.22	0	32.4	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000022982	Sod1	ENSMUST00000232505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022982	Sod1	ENSMUST00000023707	ENSMUSP00000023707	TRANSLATION	protein_coding	-	CCDS37395.1	1	154	10	4.5	8.9	172.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000000159	Igsf5	ENSMUST00000081093	ENSMUSP00000079874	TRANSLATION	protein_coding	-	CCDS28357.1	1	270	0	0	1.5	25.4	1	1,-3	-	-	5.838	PRINCIPAL:3
ENSMUSG00000000159	Igsf5	ENSMUST00000136292	ENSMUSP00000117904	TRANSLATION	protein_coding	start	-	3	92	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000159	Igsf5	ENSMUST00000000163	ENSMUSP00000000163	TRANSLATION	protein_coding	-	CCDS49924.1	1	370	0	0	1.5	26.1	1	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000000159	Igsf5	ENSMUST00000113794	ENSMUSP00000109425	TRANSLATION	protein_coding	-	CCDS49925.1	1	372	0	0	0.5	26.1	1	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000000159	Igsf5	ENSMUST00000139595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064006	Olfr190	ENSMUST00000071243	ENSMUSP00000071224	TRANSLATION	protein_coding	-	CCDS49881.1	-	307	0	0	7.5	157.9	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000064006	Olfr190	ENSMUST00000215687	ENSMUSP00000150190	TRANSLATION	nonsense_mediated_decay	-	-	5	307	0	0	7.5	157.9	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000064006	Olfr190	ENSMUST00000216495	ENSMUSP00000148991	TRANSLATION	protein_coding	-	CCDS49881.1	3	307	0	0	7.5	157.9	7	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000022711	Pmm2	ENSMUST00000230828	ENSMUSP00000155554	TRANSLATION	protein_coding	-	CCDS27941.1	-	242	30	7	1.5	372.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022711	Pmm2	ENSMUST00000130885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022711	Pmm2	ENSMUST00000142935	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022711	Pmm2	ENSMUST00000023396	ENSMUSP00000023396	TRANSLATION	protein_coding	-	CCDS27941.1	1	242	30	7	1.5	372.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022711	Pmm2	ENSMUST00000131385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022711	Pmm2	ENSMUST00000134975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022711	Pmm2	ENSMUST00000143174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022665	Ccdc80	ENSMUST00000138048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022665	Ccdc80	ENSMUST00000155800	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022665	Ccdc80	ENSMUST00000139509	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022665	Ccdc80	ENSMUST00000134924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022665	Ccdc80	ENSMUST00000099498	ENSMUSP00000097097	TRANSLATION	protein_coding	-	CCDS28192.1	1	949	0	0	1.5	324	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000022665	Ccdc80	ENSMUST00000061050	ENSMUSP00000058752	TRANSLATION	protein_coding	-	CCDS28192.1	1	949	0	0	1.5	324	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000095464	Gm21987	ENSMUST00000119704	ENSMUSP00000112386	TRANSLATION	protein_coding,RT	-	CCDS28165.1	2	63	6	1.75	6.3	77.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000040681	Hmgn1	ENSMUST00000233297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040681	Hmgn1	ENSMUST00000233292	ENSMUSP00000156496	TRANSLATION	protein_coding	-	-	-	86	0	0	0	48.3	0	-4,-5	-	-	3.054	MINOR
ENSMUSG00000040681	Hmgn1	ENSMUST00000233638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040681	Hmgn1	ENSMUST00000050884	ENSMUSP00000061012	TRANSLATION	protein_coding	-	CCDS28353.1	1	96	0	0	1.5	94.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000022496	Tnfrsf17	ENSMUST00000023140	ENSMUSP00000023140	TRANSLATION	protein_coding	-	CCDS27962.1	1	185	0	1	1.5	69.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063020	Olfr194	ENSMUST00000216519	ENSMUSP00000149379	TRANSLATION	protein_coding	-	CCDS28246.1	5	306	0	0.2	6.4	160.6	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063020	Olfr194	ENSMUST00000213228	ENSMUSP00000149646	TRANSLATION	protein_coding	-	CCDS28246.1	5	306	0	0.2	6.4	160.6	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063020	Olfr194	ENSMUST00000072608	ENSMUSP00000072407	TRANSLATION	protein_coding	-	CCDS28246.1	-	306	0	0.2	6.4	160.6	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000003531	Dgcr6	ENSMUST00000148521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003531	Dgcr6	ENSMUST00000076757	ENSMUSP00000076044	TRANSLATION	protein_coding	-	CCDS28016.1	5	170	0	0	0.5	274.9	0	-4,-7	-	-	3.402	MINOR
ENSMUSG00000003531	Dgcr6	ENSMUST00000143343	ENSMUSP00000123029	TRANSLATION	protein_coding	-	CCDS28016.1	1	170	0	0	0.5	274.9	0	-4,-7	-	-	3.402	MINOR
ENSMUSG00000003531	Dgcr6	ENSMUST00000153123	ENSMUSP00000118954	TRANSLATION	protein_coding	start	-	1	119	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003531	Dgcr6	ENSMUST00000148372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003531	Dgcr6	ENSMUST00000151266	ENSMUSP00000122572	TRANSLATION	protein_coding	-	CCDS79433.1	1	198	0	0	6.4	318.2	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000003531	Dgcr6	ENSMUST00000155387	ENSMUSP00000123053	TRANSLATION	protein_coding	-	-	3	233	0	0	0	297	0	-4,-5	-	-	4.728	MINOR
ENSMUSG00000003531	Dgcr6	ENSMUST00000066027	ENSMUSP00000067682	TRANSLATION	protein_coding	-	CCDS79432.1	2	201	0	0	6.4	311.5	0	-4,-5	-	-	7.598	ALTERNATIVE:1
ENSMUSG00000022696	Sidt1	ENSMUST00000127124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022696	Sidt1	ENSMUST00000136381	ENSMUSP00000115372	TRANSLATION	protein_coding	-	CCDS28185.1	1	827	0	0	1.5	947	12	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000022696	Sidt1	ENSMUST00000124651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022696	Sidt1	ENSMUST00000047446	ENSMUSP00000038433	TRANSLATION	protein_coding	-	CCDS49853.1	1	832	0	0	1.5	941	12	3,-2	-	-	5.64	ALTERNATIVE:2
ENSMUSG00000022696	Sidt1	ENSMUST00000127567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022696	Sidt1	ENSMUST00000147032	ENSMUSP00000114424	TRANSLATION	protein_coding	start	-	2	62	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000059280	Vpreb2	ENSMUST00000075371	ENSMUSP00000074835	TRANSLATION	protein_coding	-	CCDS28015.1	1	142	0	1.5	0.5	80.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039830	Olig2	ENSMUST00000035608	ENSMUSP00000036797	TRANSLATION	protein_coding	-	CCDS28323.1	1	323	0	0	5.1	43.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000022681	Ntan1	ENSMUST00000123849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022681	Ntan1	ENSMUST00000141791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022681	Ntan1	ENSMUST00000136618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022681	Ntan1	ENSMUST00000115805	ENSMUSP00000111472	TRANSLATION	protein_coding	-	-	3	272	0	0	0.5	319.4	0	-4,-2	-	-	1.104	MINOR
ENSMUSG00000022681	Ntan1	ENSMUST00000023362	ENSMUSP00000023362	TRANSLATION	protein_coding	-	CCDS27969.1	1	310	0	0	6.3	401	0	-4,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000022681	Ntan1	ENSMUST00000145248	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022681	Ntan1	ENSMUST00000124604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022681	Ntan1	ENSMUST00000230788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022681	Ntan1	ENSMUST00000139161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005615	Pcyt1a	ENSMUST00000123199	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005615	Pcyt1a	ENSMUST00000115140	ENSMUSP00000110793	TRANSLATION	protein_coding	-	CCDS28120.1	1	367	8	8.58	12.3	109.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000005615	Pcyt1a	ENSMUST00000231920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005615	Pcyt1a	ENSMUST00000104893	ENSMUSP00000130056	TRANSLATION	protein_coding	-	CCDS28120.1	5	367	8	8.58	12.3	109.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000005615	Pcyt1a	ENSMUST00000141421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005615	Pcyt1a	ENSMUST00000115137	ENSMUSP00000110790	TRANSLATION	protein_coding	-	-	5	265	7	5.08	0	95.7	0	-4,-6	-	-	10.398	MINOR
ENSMUSG00000005615	Pcyt1a	ENSMUST00000079791	ENSMUSP00000078721	TRANSLATION	protein_coding	-	CCDS28120.1	1	367	8	8.58	12.3	109.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000005615	Pcyt1a	ENSMUST00000141772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072419	Dppa2	ENSMUST00000232448	ENSMUSP00000156143	TRANSLATION	protein_coding	-	CCDS37350.1	-	301	0	0	0.5	230.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072419	Dppa2	ENSMUST00000097175	ENSMUSP00000110183	TRANSLATION	protein_coding	-	CCDS37350.1	1	301	0	0	0.5	230.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033501	Crygs	ENSMUST00000040592	ENSMUSP00000043588	TRANSLATION	protein_coding	-	CCDS28069.1	1	178	3	2.33	12.8	205.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000079625	Tm4sf19	ENSMUST00000115149	ENSMUSP00000110802	TRANSLATION	protein_coding	-	CCDS49827.1	1	206	0	0	1.5	185.3	0	-3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000086965	Rtl10	ENSMUST00000146673	ENSMUSP00000115114	TRANSLATION	protein_coding	-	-	1	146	0	0	0	0	0	-2,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000068078	2310034C09Rik	ENSMUST00000089111	ENSMUSP00000140130	TRANSLATION	protein_coding	-	CCDS79475.1	-	214	0	0	0.5	141.9	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000052459	Atp6v1a	ENSMUST00000114666	ENSMUSP00000110314	TRANSLATION	protein_coding	-	CCDS28182.1	1	617	12	13.13	19.5	567.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052459	Atp6v1a	ENSMUST00000137557	ENSMUSP00000116923	TRANSLATION	protein_coding	stop	-	3	237	0	5.14	0	205.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052459	Atp6v1a	ENSMUST00000130036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052459	Atp6v1a	ENSMUST00000063661	ENSMUSP00000066886	TRANSLATION	protein_coding	-	CCDS28182.1	1	617	12	13.13	19.5	567.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052459	Atp6v1a	ENSMUST00000147025	ENSMUSP00000118726	TRANSLATION	protein_coding	stop	-	5	77	0	1.81	0	49.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052459	Atp6v1a	ENSMUST00000124102	ENSMUSP00000118429	TRANSLATION	protein_coding	stop	-	5	196	0	4.14	0	171.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022748	Cmss1	ENSMUST00000232413	ENSMUSP00000156058	TRANSLATION	protein_coding	-	-	-	67	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000022748	Cmss1	ENSMUST00000231282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022748	Cmss1	ENSMUST00000114371	ENSMUSP00000110011	TRANSLATION	protein_coding	-	CCDS37365.1	1	276	0	0	3.9	25.2	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000050240	Hic2	ENSMUST00000232082	ENSMUSP00000156293	TRANSLATION	protein_coding	-	-	-	566	9	0.15	0	109	0	-4,-7	-	-	2.634	MINOR
ENSMUSG00000050240	Hic2	ENSMUST00000090190	ENSMUSP00000087656	TRANSLATION	protein_coding	-	CCDS27999.1	1	619	20	1	0.5	180.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025612	Bach1	ENSMUST00000151046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025612	Bach1	ENSMUST00000156958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025612	Bach1	ENSMUST00000026703	ENSMUSP00000026703	TRANSLATION	protein_coding	-	CCDS28293.1	1	739	0	2.2	1.5	141.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063358	Mapk1	ENSMUST00000232281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063358	Mapk1	ENSMUST00000231420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063358	Mapk1	ENSMUST00000232067	ENSMUSP00000156214	TRANSLATION	protein_coding	start	-	-	134	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063358	Mapk1	ENSMUST00000232630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063358	Mapk1	ENSMUST00000232611	ENSMUSP00000156154	TRANSLATION	protein_coding	-	CCDS27992.1	-	358	19	8.33	9.5	232	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063358	Mapk1	ENSMUST00000115731	ENSMUSP00000111396	TRANSLATION	protein_coding	-	CCDS27992.1	1	358	19	8.33	9.5	232	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000063358	Mapk1	ENSMUST00000231821	ENSMUSP00000156250	TRANSLATION	protein_coding	start	-	-	108	0	3	0	37.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063358	Mapk1	ENSMUST00000232480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063358	Mapk1	ENSMUST00000069107	ENSMUSP00000065983	TRANSLATION	protein_coding	-	CCDS27992.1	1	358	19	8.33	9.5	232	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039179	Tekt5	ENSMUST00000115831	ENSMUSP00000111497	TRANSLATION	protein_coding	-	-	1	415	0	0	0.5	366.1	0	-4,-5	-	-	1.242	MINOR
ENSMUSG00000039179	Tekt5	ENSMUST00000043415	ENSMUSP00000046824	TRANSLATION	protein_coding	-	CCDS70683.1	1	557	0	0	0.5	445.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055811	Cldn17	ENSMUST00000069549	ENSMUSP00000066427	TRANSLATION	protein_coding	-	CCDS28295.1	-	224	0	0.8	6.3	93.2	0	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000057855	Krtap6-3	ENSMUST00000185581	ENSMUSP00000140246	TRANSLATION	protein_coding	-	-	-	57	0	0	0	40.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057855	Krtap6-3	ENSMUST00000079151	ENSMUSP00000078152	TRANSLATION	protein_coding	start	-	-	54	0	0	0	32.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032948	Lipi	ENSMUST00000062721	ENSMUSP00000053447	TRANSLATION	protein_coding	-	CCDS28272.2	1	476	4	5.56	1.5	272	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000032948	Lipi	ENSMUST00000186809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050685	Ccdc54	ENSMUST00000062439	ENSMUSP00000049864	TRANSLATION	protein_coding	-	CCDS28214.1	-	329	0	0	3.9	0	0	-4,0	-	-	1	PRINCIPAL:1
ENSMUSG00000022679	Mpv17l	ENSMUST00000148966	ENSMUSP00000116298	TRANSLATION	nonsense_mediated_decay	-	-	2	116	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000128757	ENSMUSP00000120169	TRANSLATION	protein_coding	-	CCDS79423.1	1	96	0	0	1.5	70.3	0	-4,-7	-	-	6.238	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000143697	ENSMUSP00000116147	TRANSLATION	protein_coding	-	CCDS79425.1	2	147	0	0	0.5	0	0	-1,-4	-	-	0	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000156143	ENSMUSP00000123656	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	70.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000124947	ENSMUSP00000117826	TRANSLATION	protein_coding	-	CCDS79426.1	3	90	0	0	1.5	70.3	0	-4,-6	-	-	6.238	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000141971	ENSMUSP00000123424	TRANSLATION	protein_coding	-	-	1	104	0	0	0.5	70.3	0	-4,-7	-	-	6	MINOR
ENSMUSG00000022679	Mpv17l	ENSMUST00000023360	ENSMUSP00000023360	TRANSLATION	protein_coding	-	CCDS27970.1	1	194	0	0	5.2	70.3	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000105066	Iglj4	ENSMUST00000198313	ENSMUSP00000142762	TRANSLATION	IG_J_gene	start/stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000071637	Cebpd	ENSMUST00000210772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071637	Cebpd	ENSMUST00000096232	ENSMUSP00000148145	TRANSLATION	protein_coding	-	CCDS84207.1	-	268	0	0.4	3.9	64.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000066257	Olfr206	ENSMUST00000207927	ENSMUSP00000146906	TRANSLATION	protein_coding	-	CCDS28255.1	5	306	0	0.2	1.5	162	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000066257	Olfr206	ENSMUST00000084791	ENSMUSP00000081849	TRANSLATION	protein_coding	-	CCDS28255.1	-	306	0	0.2	1.5	162	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000386	Mx1	ENSMUST00000232282	ENSMUSP00000156203	TRANSLATION	protein_coding	start	-	-	287	15	5	0	231.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000386	Mx1	ENSMUST00000232193	ENSMUSP00000156307	TRANSLATION	protein_coding	start	-	-	298	11	4.7	0	186	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000386	Mx1	ENSMUST00000142883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000386	Mx1	ENSMUST00000231461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000386	Mx1	ENSMUST00000155233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000386	Mx1	ENSMUST00000231995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000386	Mx1	ENSMUST00000023655	ENSMUSP00000023655	TRANSLATION	protein_coding	-	-	5	627	16	9.84	0	375.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000386	Mx1	ENSMUST00000238205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000386	Mx1	ENSMUST00000113768	ENSMUSP00000109397	TRANSLATION	polymorphic_pseudogene	-	-	1	397	11	6.7	0	275	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000386	Mx1	ENSMUST00000231455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000386	Mx1	ENSMUST00000135184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000386	Mx1	ENSMUST00000238262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022836	Mylk	ENSMUST00000231998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022836	Mylk	ENSMUST00000231589	ENSMUSP00000156149	TRANSLATION	protein_coding	-	-	-	159	0	2.7	0	100.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022836	Mylk	ENSMUST00000232477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022836	Mylk	ENSMUST00000232066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022836	Mylk	ENSMUST00000155268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022836	Mylk	ENSMUST00000023538	ENSMUSP00000023538	TRANSLATION	protein_coding	-	CCDS37320.1	1	1950	16	13.472	0.5	1159.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000022836	Mylk	ENSMUST00000232482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022836	Mylk	ENSMUST00000232541	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045341	Olfr167	ENSMUST00000214315	ENSMUSP00000150102	TRANSLATION	protein_coding	-	CCDS28035.1	5	312	0	0.4	5.1	155.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000045341	Olfr167	ENSMUST00000217566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045341	Olfr167	ENSMUST00000054606	ENSMUSP00000055344	TRANSLATION	protein_coding	-	CCDS28035.1	-	312	0	0.4	5.1	155.9	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043065	Spice1	ENSMUST00000152425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043065	Spice1	ENSMUST00000145663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043065	Spice1	ENSMUST00000133168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043065	Spice1	ENSMUST00000132663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043065	Spice1	ENSMUST00000155661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043065	Spice1	ENSMUST00000126228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043065	Spice1	ENSMUST00000135340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043065	Spice1	ENSMUST00000050897	ENSMUSP00000058832	TRANSLATION	protein_coding	-	CCDS37345.1	1	860	0	0	0.5	493.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000043008	Klhl6	ENSMUST00000058839	ENSMUSP00000053023	TRANSLATION	protein_coding	-	CCDS28041.2	1	619	0	4.4	7.5	298.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043008	Klhl6	ENSMUST00000166801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043008	Klhl6	ENSMUST00000171910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043008	Klhl6	ENSMUST00000165530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022914	Brwd1	ENSMUST00000233270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000233976	ENSMUSP00000156641	TRANSLATION	nonsense_mediated_decay	start	-	-	410	0	5.175	0	41.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022914	Brwd1	ENSMUST00000232898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000233074	ENSMUSP00000156888	TRANSLATION	protein_coding	start/stop	-	-	602	0	5.475	0	41.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022914	Brwd1	ENSMUST00000232801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000232794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000023631	ENSMUSP00000023631	TRANSLATION	protein_coding	-	-	1	2304	0	11.81	1.5	234.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022914	Brwd1	ENSMUST00000233084	ENSMUSP00000156609	TRANSLATION	protein_coding	start/stop	-	-	377	0	3.635	0	110.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022914	Brwd1	ENSMUST00000232694	ENSMUSP00000156709	TRANSLATION	nonsense_mediated_decay	start	-	-	632	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022914	Brwd1	ENSMUST00000099502	ENSMUSP00000097101	TRANSLATION	protein_coding	-	CCDS49923.1	1	2304	0	11.81	1.5	234.5	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000022914	Brwd1	ENSMUST00000232755	ENSMUSP00000156497	TRANSLATION	protein_coding	-	-	-	2259	0	11.81	0.5	234.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000022914	Brwd1	ENSMUST00000113827	ENSMUSP00000109458	TRANSLATION	protein_coding	-	CCDS49922.1	1	120	0	0	2.9	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000022914	Brwd1	ENSMUST00000233883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022914	Brwd1	ENSMUST00000233610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000233699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022914	Brwd1	ENSMUST00000232993	ENSMUSP00000156919	TRANSLATION	protein_coding	start/stop	-	-	398	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094422	Olfr205	ENSMUST00000213910	ENSMUSP00000149415	TRANSLATION	protein_coding	-	CCDS28254.1	5	305	0	0.2	3.9	167.3	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000094422	Olfr205	ENSMUST00000074125	ENSMUSP00000073762	TRANSLATION	protein_coding	-	CCDS28254.1	-	305	0	0.2	3.9	167.3	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000041079	Rwdd2b	ENSMUST00000152430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041079	Rwdd2b	ENSMUST00000231843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041079	Rwdd2b	ENSMUST00000039101	ENSMUSP00000049168	TRANSLATION	protein_coding	-	CCDS37383.1	1	290	0	2.55	1.5	122.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022601	Zbtb11	ENSMUST00000050248	ENSMUSP00000056923	TRANSLATION	protein_coding	-	CCDS49874.1	5	1050	47	5.2	1.5	235.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022601	Zbtb11	ENSMUST00000184618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022601	Zbtb11	ENSMUST00000183440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036304	Zdhhc23	ENSMUST00000231700	ENSMUSP00000156253	TRANSLATION	protein_coding	-	CCDS28180.1	-	425	6	0	1.5	107.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036304	Zdhhc23	ENSMUST00000036321	ENSMUSP00000044744	TRANSLATION	protein_coding	-	-	1	422	6	0	1.5	87.1	7	-4,-5	-	-	10.776	MINOR
ENSMUSG00000036304	Zdhhc23	ENSMUST00000232055	ENSMUSP00000156089	TRANSLATION	protein_coding	-	-	-	388	6	0	0.5	42	6	-4,-5	-	-	8.07	MINOR
ENSMUSG00000036304	Zdhhc23	ENSMUST00000165648	ENSMUSP00000128650	TRANSLATION	protein_coding	-	CCDS28180.1	1	425	6	0	1.5	107.5	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023791	Pigx	ENSMUST00000144216	ENSMUSP00000122511	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000232321	ENSMUSP00000156144	TRANSLATION	protein_coding	-	-	-	150	0	0	0	98	1	-4,-5	-	-	3.06	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000151250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023791	Pigx	ENSMUST00000155966	ENSMUSP00000114854	TRANSLATION	protein_coding	-	-	2	252	0	0	0.5	147	1	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000023791	Pigx	ENSMUST00000143011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023791	Pigx	ENSMUST00000135677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023791	Pigx	ENSMUST00000096109	ENSMUSP00000093819	TRANSLATION	protein_coding	-	-	1	254	0	0	0.5	147	1	3,-2	-	-	6	PRINCIPAL:3
ENSMUSG00000023791	Pigx	ENSMUST00000147003	ENSMUSP00000120272	TRANSLATION	nonsense_mediated_decay	start	-	5	60	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000189013	ENSMUSP00000141122	TRANSLATION	protein_coding	start	CCDS49824.1	2	252	0	0	0.5	147	1	3,-2	-	-	-1	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000136643	ENSMUSP00000118256	TRANSLATION	nonsense_mediated_decay	start	-	5	78	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000147688	ENSMUSP00000121801	TRANSLATION	nonsense_mediated_decay	start	-	3	106	0	0	0	37	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023791	Pigx	ENSMUST00000133584	ENSMUSP00000119754	TRANSLATION	nonsense_mediated_decay	start	-	3	76	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000068617	Efcab1	ENSMUST00000229825	ENSMUSP00000155853	TRANSLATION	nonsense_mediated_decay	-	-	-	107	4	1.68	1.2	27	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068617	Efcab1	ENSMUST00000229121	ENSMUSP00000155692	TRANSLATION	nonsense_mediated_decay	-	-	-	195	16	3.08	0	101	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068617	Efcab1	ENSMUST00000228998	ENSMUSP00000155377	TRANSLATION	nonsense_mediated_decay	-	-	-	169	10	2.678	0	55.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068617	Efcab1	ENSMUST00000090277	ENSMUSP00000087744	TRANSLATION	protein_coding	-	CCDS27975.1	1	212	16	3.18	7.5	101	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000022906	Parp9	ENSMUST00000122870	ENSMUSP00000123736	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022906	Parp9	ENSMUST00000159160	ENSMUSP00000124098	TRANSLATION	nonsense_mediated_decay	start	-	3	104	10	1.75	0	25.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022906	Parp9	ENSMUST00000023622	ENSMUSP00000023622	TRANSLATION	protein_coding	-	-	1	597	18	5.54	0.5	56.9	0	-4,-5	-	-	5.73	MINOR
ENSMUSG00000022906	Parp9	ENSMUST00000114877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022906	Parp9	ENSMUST00000153066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022906	Parp9	ENSMUST00000114878	ENSMUSP00000110528	TRANSLATION	protein_coding	-	CCDS37326.1	1	830	25	6.34	1.5	161.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000022906	Parp9	ENSMUST00000128878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054905	Stfa3	ENSMUST00000068182	ENSMUSP00000067445	TRANSLATION	protein_coding	-	CCDS28153.1	1	103	0	2.75	1.5	83.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094733	Csta3	ENSMUST00000089628	ENSMUSP00000087054	TRANSLATION	protein_coding	-	CCDS37329.1	1	97	0	2.75	1.5	76.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022855	Senp2	ENSMUST00000232534	ENSMUSP00000155909	TRANSLATION	protein_coding	stop	-	-	198	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000232263	ENSMUSP00000156054	TRANSLATION	nonsense_mediated_decay	start	-	-	222	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000232679	ENSMUSP00000156326	TRANSLATION	nonsense_mediated_decay	-	-	-	105	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000231724	ENSMUSP00000156004	TRANSLATION	nonsense_mediated_decay	-	-	-	63	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000231798	ENSMUSP00000156045	TRANSLATION	nonsense_mediated_decay	start	-	-	64	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000231632	ENSMUSP00000156157	TRANSLATION	protein_coding	stop	-	-	29	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022855	Senp2	ENSMUST00000231408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022855	Senp2	ENSMUST00000023561	ENSMUSP00000023561	TRANSLATION	protein_coding	-	CCDS28065.1	1	588	5	5.45	6.3	130	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000110358	A730009L09Rik	ENSMUST00000209558	ENSMUSP00000147828	TRANSLATION	protein_coding	-	-	1	72	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000110358	A730009L09Rik	ENSMUST00000210306	ENSMUSP00000147284	TRANSLATION	protein_coding	-	-	5	66	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000110573	Gm5485	ENSMUST00000212197	ENSMUSP00000148687	TRANSLATION	protein_coding	-	-	1	91	0	0	1.2	0	0	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000033187	BC016579	ENSMUST00000036732	ENSMUSP00000037651	TRANSLATION	protein_coding	-	CCDS49862.1	1	218	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000076940	Iglv2	ENSMUST00000103752	ENSMUSP00000100466	TRANSLATION	IG_V_gene	stop	-	-	116	0	1.5	0	41.8	0	3,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000076940	Iglv2	ENSMUST00000197518	ENSMUSP00000142646	TRANSLATION	IG_V_gene	stop	-	-	117	0	1.5	0	41.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000022747	St3gal6	ENSMUST00000137035	ENSMUSP00000115756	TRANSLATION	protein_coding	-	CCDS28230.1	1	329	11	2.84	6.3	204.9	2	0,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022747	St3gal6	ENSMUST00000126978	ENSMUSP00000116202	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	2	0,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000232391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022747	St3gal6	ENSMUST00000114357	ENSMUSP00000109997	TRANSLATION	protein_coding	-	CCDS28230.1	1	329	11	2.84	6.3	204.9	2	0,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022747	St3gal6	ENSMUST00000123918	ENSMUSP00000117849	TRANSLATION	protein_coding	stop	-	3	26	0	0	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000114358	ENSMUSP00000109998	TRANSLATION	protein_coding	-	CCDS28230.1	1	329	11	2.84	6.3	204.9	2	0,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000022747	St3gal6	ENSMUST00000145283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022747	St3gal6	ENSMUST00000149456	ENSMUSP00000156226	TRANSLATION	protein_coding	stop	-	3	50	0	0	0	0	2	0,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000137850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022747	St3gal6	ENSMUST00000151510	ENSMUSP00000156169	TRANSLATION	protein_coding	stop	-	3	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000142900	ENSMUSP00000156309	TRANSLATION	protein_coding	stop	-	2	5	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000148061	ENSMUSP00000155951	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022747	St3gal6	ENSMUST00000149197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022747	St3gal6	ENSMUST00000135721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022747	St3gal6	ENSMUST00000125712	ENSMUSP00000156105	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064061	Dzip3	ENSMUST00000114516	ENSMUSP00000110161	TRANSLATION	protein_coding	-	CCDS37353.1	1	998	8	1.76	1.5	39.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000064061	Dzip3	ENSMUST00000121869	ENSMUSP00000113344	TRANSLATION	protein_coding	-	CCDS49866.1	5	1204	8	1.76	1.5	39.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000064061	Dzip3	ENSMUST00000123961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064061	Dzip3	ENSMUST00000147358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064061	Dzip3	ENSMUST00000139350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064061	Dzip3	ENSMUST00000133377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064061	Dzip3	ENSMUST00000151950	ENSMUSP00000117675	TRANSLATION	protein_coding	start	-	2	167	5	1.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035764	Fbxo45	ENSMUST00000042732	ENSMUSP00000040168	TRANSLATION	protein_coding	-	CCDS28117.1	1	286	3	1.8	0.5	112.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000037965	Zc3h7a	ENSMUST00000130355	ENSMUSP00000120931	TRANSLATION	protein_coding	stop	-	5	206	0	2.355	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000128083	ENSMUSP00000114246	TRANSLATION	protein_coding	stop	-	1	583	3	2.355	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000140898	ENSMUSP00000118771	TRANSLATION	nonsense_mediated_decay	start	-	3	174	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000125537	ENSMUSP00000122525	TRANSLATION	protein_coding	stop	-	5	87	0	0.83	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000143926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000142389	ENSMUSP00000114432	TRANSLATION	protein_coding	stop	-	5	84	0	0.83	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000155255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000155340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000138282	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000140755	ENSMUSP00000120720	TRANSLATION	nonsense_mediated_decay	-	-	1	390	0	2.355	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037965	Zc3h7a	ENSMUST00000155343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000037633	ENSMUSP00000041308	TRANSLATION	protein_coding	-	CCDS49762.1	1	970	11	4.155	5.1	0	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000037965	Zc3h7a	ENSMUST00000140775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000139391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000143121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000142844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000145457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037965	Zc3h7a	ENSMUST00000138185	ENSMUSP00000119480	TRANSLATION	protein_coding	stop	-	1	762	7	2.355	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000231708	ENSMUSP00000156343	TRANSLATION	nonsense_mediated_decay	-	-	-	132	3	1.28	0	92.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000231493	ENSMUSP00000156374	TRANSLATION	nonsense_mediated_decay	-	-	-	132	3	1.28	0	92.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000231502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041774	Ydjc	ENSMUST00000231539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041774	Ydjc	ENSMUST00000231726	ENSMUSP00000156244	TRANSLATION	protein_coding	-	-	-	271	4	1.76	0	176.1	0	-4,-7	-	-	13.24	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000232479	ENSMUSP00000156140	TRANSLATION	protein_coding	-	-	-	285	4	1.76	0	176.1	0	-4,-7	-	-	13.24	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000231975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041774	Ydjc	ENSMUST00000232344	ENSMUSP00000156006	TRANSLATION	protein_coding	-	-	-	158	4	1.76	0	154	0	-4,-7	-	-	11.914	MINOR
ENSMUSG00000041774	Ydjc	ENSMUST00000069064	ENSMUSP00000069864	TRANSLATION	protein_coding	-	CCDS27996.1	1	310	4	1.76	1.5	222.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000049076	Acap2	ENSMUST00000230614	ENSMUSP00000154983	TRANSLATION	protein_coding	-	CCDS49823.1	-	770	4	17.33	1.5	538.1	0	-4,-5	-	-	14.998	PRINCIPAL:2
ENSMUSG00000049076	Acap2	ENSMUST00000231125	ENSMUSP00000154852	TRANSLATION	protein_coding	-	-	-	777	4	17.165	1.5	528.9	0	-4,-5	-	-	14.116	MINOR
ENSMUSG00000049076	Acap2	ENSMUST00000239132	ENSMUSP00000159102	TRANSLATION	protein_coding	start	-	-	99	0	2.07	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049076	Acap2	ENSMUST00000230839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049076	Acap2	ENSMUST00000230698	ENSMUSP00000154938	TRANSLATION	nonsense_mediated_decay	-	-	-	142	0	2.36	0	116.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049076	Acap2	ENSMUST00000058033	ENSMUSP00000061501	TRANSLATION	protein_coding	-	-	1	752	4	16.93	0	492.6	0	-4,-5	-	-	11.47	MINOR
ENSMUSG00000049076	Acap2	ENSMUST00000229010	ENSMUSP00000156077	TRANSLATION	protein_coding	-	-	-	805	4	17.83	1.5	538.1	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000014074	Rnf168	ENSMUST00000155649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014074	Rnf168	ENSMUST00000171474	ENSMUSP00000126484	TRANSLATION	protein_coding	-	CCDS49825.1	1	567	8	1.6	0.5	27.8	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000014074	Rnf168	ENSMUST00000014218	ENSMUSP00000014218	TRANSLATION	protein_coding	-	-	1	565	8	1.6	0.5	27.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000039672	Kcne2	ENSMUST00000113971	ENSMUSP00000109604	TRANSLATION	protein_coding	-	CCDS28333.1	1	123	0	1	8.8	58.9	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039672	Kcne2	ENSMUST00000047383	ENSMUSP00000048849	TRANSLATION	protein_coding	-	CCDS28333.1	1	123	0	1	8.8	58.9	1	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000068075	Gm10229	ENSMUST00000089106	ENSMUSP00000086507	TRANSLATION	protein_coding	-	CCDS49897.1	-	77	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000056423	Uts2b	ENSMUST00000070531	ENSMUSP00000070840	TRANSLATION	protein_coding	-	CCDS28091.1	1	113	0	0	0.5	23.2	0	2,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000039568	Ubald1	ENSMUST00000143873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039568	Ubald1	ENSMUST00000037843	ENSMUSP00000037809	TRANSLATION	protein_coding	-	CCDS49750.1	1	176	0	1.75	6.3	32.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000022753	Tmem30c	ENSMUST00000119407	ENSMUSP00000112989	TRANSLATION	protein_coding	-	CCDS49876.1	1	342	0	0	1.5	282.6	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022753	Tmem30c	ENSMUST00000120112	ENSMUSP00000113896	TRANSLATION	protein_coding	-	-	1	292	0	0	0	210.2	2	-4,-6	-	-	1.656	MINOR
ENSMUSG00000022753	Tmem30c	ENSMUST00000023434	ENSMUSP00000023434	TRANSLATION	protein_coding	-	CCDS49876.1	5	342	0	0	1.5	282.6	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022750	Klhl22	ENSMUST00000144116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022750	Klhl22	ENSMUST00000165790	ENSMUSP00000127227	TRANSLATION	protein_coding	-	CCDS49783.1	1	634	0	4.98	8.8	289.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022750	Klhl22	ENSMUST00000129299	ENSMUSP00000156231	TRANSLATION	protein_coding	stop	-	2	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022750	Klhl22	ENSMUST00000126600	ENSMUSP00000118696	TRANSLATION	protein_coding	stop	-	3	114	0	2	0	68.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022750	Klhl22	ENSMUST00000129199	ENSMUSP00000119191	TRANSLATION	protein_coding	stop	-	2	117	0	2	0	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022750	Klhl22	ENSMUST00000140306	ENSMUSP00000122145	TRANSLATION	protein_coding	stop	-	2	122	0	2	0	73	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022750	Klhl22	ENSMUST00000120488	ENSMUSP00000112412	TRANSLATION	protein_coding	-	CCDS49783.1	1	634	0	4.98	8.8	289.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039427	Alg1	ENSMUST00000147530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039427	Alg1	ENSMUST00000049207	ENSMUSP00000046534	TRANSLATION	protein_coding	-	-	2	456	0	0	0	44.5	0	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000039427	Alg1	ENSMUST00000100196	ENSMUSP00000097770	TRANSLATION	protein_coding	-	CCDS49753.1	1	482	0	0	0.5	44.5	0	1,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000039427	Alg1	ENSMUST00000142902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039427	Alg1	ENSMUST00000153730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014303	Glis2	ENSMUST00000141682	ENSMUSP00000115728	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014303	Glis2	ENSMUST00000014447	ENSMUSP00000014447	TRANSLATION	protein_coding	-	CCDS27920.1	1	521	20	2.4	7.5	63.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000014303	Glis2	ENSMUST00000127120	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014303	Glis2	ENSMUST00000122896	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014303	Glis2	ENSMUST00000135577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022952	Runx1	ENSMUST00000023673	ENSMUSP00000023673	TRANSLATION	protein_coding	-	CCDS49917.1	1	465	0	6.4	6.3	379	0	-4,-6	-	-	13.34	PRINCIPAL:4
ENSMUSG00000022952	Runx1	ENSMUST00000168195	ENSMUSP00000131079	TRANSLATION	protein_coding	-	CCDS49916.1	1	451	0	6.73	3.9	379	0	-4,-2	-	-	13.094	ALTERNATIVE:2
ENSMUSG00000022952	Runx1	ENSMUST00000189126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022952	Runx1	ENSMUST00000186296	ENSMUSP00000140419	TRANSLATION	protein_coding	stop	-	3	68	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022952	Runx1	ENSMUST00000187242	ENSMUSP00000139819	TRANSLATION	protein_coding	start	-	5	63	0	1	0	114.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022952	Runx1	ENSMUST00000113956	ENSMUSP00000109589	TRANSLATION	protein_coding	-	CCDS28339.1	1	387	0	5.73	0.5	377.5	0	-4,-2	-	-	9.912	MINOR
ENSMUSG00000022952	Runx1	ENSMUST00000189679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014039	Prdm15	ENSMUST00000231599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014039	Prdm15	ENSMUST00000129331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014039	Prdm15	ENSMUST00000128917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014039	Prdm15	ENSMUST00000142295	ENSMUSP00000120497	TRANSLATION	nonsense_mediated_decay	-	-	1	474	14	6.02	0	40.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014039	Prdm15	ENSMUST00000126916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014039	Prdm15	ENSMUST00000095849	ENSMUSP00000093533	TRANSLATION	protein_coding	-	CCDS49926.1	5	1174	64	10.82	0.5	167.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000014039	Prdm15	ENSMUST00000121584	ENSMUSP00000113791	TRANSLATION	protein_coding	-	-	1	1148	64	10.82	1.5	167.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000014039	Prdm15	ENSMUST00000131951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014039	Prdm15	ENSMUST00000136529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014039	Prdm15	ENSMUST00000135505	ENSMUSP00000115814	TRANSLATION	protein_coding	stop	-	3	85	3	0.8	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014039	Prdm15	ENSMUST00000119200	ENSMUSP00000113002	TRANSLATION	protein_coding	stop	-	3	110	3	2.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022965	Ifngr2	ENSMUST00000130404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022965	Ifngr2	ENSMUST00000127644	ENSMUSP00000119580	TRANSLATION	nonsense_mediated_decay	-	-	5	46	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000022965	Ifngr2	ENSMUST00000023687	ENSMUSP00000023687	TRANSLATION	protein_coding	-	CCDS28327.1	1	332	0	4.3	0.5	128.1	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000038148	Cldn16	ENSMUST00000115302	ENSMUSP00000110957	TRANSLATION	protein_coding	-	CCDS28088.1	1	235	0	1.86	4	66.1	4	0,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000038148	Cldn16	ENSMUST00000161053	ENSMUSP00000124528	TRANSLATION	protein_coding	-	CCDS28088.1	1	235	0	1.86	4	66.1	4	0,-4	-	-	13	PRINCIPAL:1
ENSMUSG00000038084	Opa1	ENSMUST00000160153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038084	Opa1	ENSMUST00000160101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038084	Opa1	ENSMUST00000160475	ENSMUSP00000124739	TRANSLATION	nonsense_mediated_decay	-	-	1	692	20	6	0	130.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038084	Opa1	ENSMUST00000159036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038084	Opa1	ENSMUST00000162240	ENSMUSP00000124029	TRANSLATION	protein_coding	start/stop	-	5	296	12	2.22	0	58.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038084	Opa1	ENSMUST00000161186	ENSMUSP00000123880	TRANSLATION	protein_coding	stop	-	5	997	20	6	6.3	130.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038084	Opa1	ENSMUST00000038867	ENSMUSP00000036993	TRANSLATION	protein_coding	-	CCDS57024.1	1	978	20	6	6.3	130.3	0	-4,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000038084	Opa1	ENSMUST00000160597	ENSMUSP00000124223	TRANSLATION	protein_coding	-	CCDS28096.1	1	960	20	6	6.3	130.3	0	-4,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000051483	Cbr1	ENSMUST00000232551	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051483	Cbr1	ENSMUST00000039659	ENSMUSP00000049394	TRANSLATION	protein_coding	-	CCDS28341.1	1	277	28	3	17	96.8	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000051483	Cbr1	ENSMUST00000231450	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051483	Cbr1	ENSMUST00000231762	ENSMUSP00000155872	TRANSLATION	protein_coding	-	-	-	134	17	2	0	82.2	0	-4,-2	-	-	9.096	MINOR
ENSMUSG00000090629	Olfr180	ENSMUST00000206168	ENSMUSP00000145601	TRANSLATION	protein_coding	-	-	5	307	0	0.6	0	150.6	12	-4,-6	-	-	10.71	MINOR
ENSMUSG00000090629	Olfr180	ENSMUST00000171656	ENSMUSP00000128358	TRANSLATION	protein_coding	-	CCDS28239.1	2	317	0	0.6	1.5	172.1	13	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000090629	Olfr180	ENSMUST00000205883	ENSMUSP00000145802	TRANSLATION	protein_coding	stop	-	2	135	0	0.6	0	85.1	7	-4,-6	-	-	-1	MINOR
ENSMUSG00000022501	Prm1	ENSMUST00000023144	ENSMUSP00000023144	TRANSLATION	protein_coding	-	CCDS27956.1	1	51	0	0	0.5	42.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022501	Prm1	ENSMUST00000230568	ENSMUSP00000155855	TRANSLATION	protein_coding	-	CCDS27956.1	-	51	0	0	0.5	42.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000022761	Lztr1	ENSMUST00000231538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000231746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000232242	ENSMUSP00000156102	TRANSLATION	protein_coding	stop	-	-	58	0	1.28	0	24.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022761	Lztr1	ENSMUST00000232438	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022761	Lztr1	ENSMUST00000231684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000023444	ENSMUSP00000023444	TRANSLATION	protein_coding	-	CCDS37272.1	1	837	0	8.666	1.5	253.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000022761	Lztr1	ENSMUST00000232372	ENSMUSP00000155880	TRANSLATION	protein_coding	stop	-	-	280	0	4.3	0	109.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022761	Lztr1	ENSMUST00000231292	ENSMUSP00000156071	TRANSLATION	protein_coding	-	-	-	818	0	8.266	0	217.9	0	-4,-6	-	-	9.072	MINOR
ENSMUSG00000022761	Lztr1	ENSMUST00000231994	ENSMUSP00000155869	TRANSLATION	nonsense_mediated_decay	-	-	-	225	0	3.88	0	86.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000022761	Lztr1	ENSMUST00000231230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000232379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000232644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022761	Lztr1	ENSMUST00000231326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022761	Lztr1	ENSMUST00000231307	ENSMUSP00000156018	TRANSLATION	protein_coding	start	-	-	529	0	3.49	0	108.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035376	Hacd2	ENSMUST00000231556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035376	Hacd2	ENSMUST00000061156	ENSMUSP00000060462	TRANSLATION	protein_coding	-	CCDS37321.1	1	254	0	0	0.5	200.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000035376	Hacd2	ENSMUST00000231516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035790	Cep19	ENSMUST00000042869	ENSMUSP00000046587	TRANSLATION	protein_coding	-	CCDS28114.1	5	163	0	0	7.6	190.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000035790	Cep19	ENSMUST00000169186	ENSMUSP00000126083	TRANSLATION	protein_coding	-	CCDS28114.1	2	163	0	0	7.6	190.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000035790	Cep19	ENSMUST00000115168	ENSMUSP00000110822	TRANSLATION	protein_coding	-	CCDS28114.1	1	163	0	0	7.6	190.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000022763	Aifm3	ENSMUST00000231800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022763	Aifm3	ENSMUST00000232359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022763	Aifm3	ENSMUST00000023448	ENSMUSP00000023448	TRANSLATION	protein_coding	-	CCDS28003.1	1	598	54	9.805	6.3	147.8	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000022763	Aifm3	ENSMUST00000232421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022763	Aifm3	ENSMUST00000231508	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022763	Aifm3	ENSMUST00000115685	ENSMUSP00000111349	TRANSLATION	protein_coding	-	CCDS79430.1	1	605	54	9.805	3.9	147.8	0	-4,-5	-	-	19.094	ALTERNATIVE:2
ENSMUSG00000022899	Slc15a2	ENSMUST00000167909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022899	Slc15a2	ENSMUST00000164579	ENSMUSP00000132029	TRANSLATION	protein_coding	-	CCDS49842.1	1	259	0	4.61	0.5	151.6	11	-4,-5	-	-	0	MINOR
ENSMUSG00000022899	Slc15a2	ENSMUST00000165531	ENSMUSP00000132663	TRANSLATION	protein_coding	-	-	5	709	0	13.204	0	414.8	17	-4,-5	-	-	9.168	MINOR
ENSMUSG00000022899	Slc15a2	ENSMUST00000168279	ENSMUSP00000132885	TRANSLATION	protein_coding	-	-	3	189	0	3.36	0	72.3	7	-4,-5	-	-	0	MINOR
ENSMUSG00000022899	Slc15a2	ENSMUST00000100308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022899	Slc15a2	ENSMUST00000023616	ENSMUSP00000023616	TRANSLATION	protein_coding	-	CCDS28156.1	1	740	0	13.764	1.5	443.3	19	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000022899	Slc15a2	ENSMUST00000165380	ENSMUSP00000131395	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022899	Slc15a2	ENSMUST00000166399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022899	Slc15a2	ENSMUST00000163964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022899	Slc15a2	ENSMUST00000163471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022899	Slc15a2	ENSMUST00000167941	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022899	Slc15a2	ENSMUST00000164770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022899	Slc15a2	ENSMUST00000172382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022899	Slc15a2	ENSMUST00000169644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022883	Robo1	ENSMUST00000231474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022883	Robo1	ENSMUST00000232205	ENSMUSP00000155958	TRANSLATION	protein_coding	start	-	-	1622	2	15.45	0	433.4	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000022883	Robo1	ENSMUST00000023600	ENSMUSP00000023600	TRANSLATION	protein_coding	-	CCDS37376.1	1	1612	2	15.45	7.5	433.4	1	-2,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000022883	Robo1	ENSMUST00000231566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022883	Robo1	ENSMUST00000231580	ENSMUSP00000156106	TRANSLATION	protein_coding	stop	-	-	133	2	1.4	0	62.7	0	2,-2	-	-	-1	MINOR
ENSMUSG00000022883	Robo1	ENSMUST00000231265	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022883	Robo1	ENSMUST00000232264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022883	Robo1	ENSMUST00000232432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022883	Robo1	ENSMUST00000232545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039646	Vasn	ENSMUST00000038770	ENSMUSP00000045162	TRANSLATION	protein_coding	-	CCDS27921.1	1	673	0	0.32	1.5	136	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039646	Vasn	ENSMUST00000138044	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000116925	Gm49776	ENSMUST00000232144	ENSMUSP00000155887	TRANSLATION	nonsense_mediated_decay,RT	start	-	-	108	0	1.8	0	0	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000062082	Cd200r4	ENSMUST00000176321	ENSMUSP00000135162	TRANSLATION	protein_coding	-	-	1	224	6	2.4	0.5	64.7	2	-3,-5	-	-	16.236	MINOR
ENSMUSG00000062082	Cd200r4	ENSMUST00000114626	ENSMUSP00000110273	TRANSLATION	protein_coding	-	CCDS37346.1	1	270	6	3.15	0.5	67.7	2	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000062082	Cd200r4	ENSMUST00000176819	ENSMUSP00000135299	TRANSLATION	protein_coding	-	CCDS37346.1	5	270	6	3.15	0.5	67.7	2	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000022498	Txndc11	ENSMUST00000038424	ENSMUSP00000041113	TRANSLATION	protein_coding	-	CCDS27960.1	1	948	3	3.724	1.5	76.4	3	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022498	Txndc11	ENSMUST00000131012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022498	Txndc11	ENSMUST00000118679	ENSMUSP00000112601	TRANSLATION	protein_coding	-	-	1	254	0	1.624	0	38.6	3	-4,-5	-	-	4.83	MINOR
ENSMUSG00000022498	Txndc11	ENSMUST00000118362	ENSMUSP00000113432	TRANSLATION	protein_coding	-	-	1	639	0	2.024	0	38.6	3	-4,-5	-	-	5.628	MINOR
ENSMUSG00000022498	Txndc11	ENSMUST00000147884	ENSMUSP00000117426	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000022498	Txndc11	ENSMUST00000145225	ENSMUSP00000116563	TRANSLATION	nonsense_mediated_decay	-	-	1	271	0	2.024	0	38.6	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000022498	Txndc11	ENSMUST00000146081	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022498	Txndc11	ENSMUST00000148183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022498	Txndc11	ENSMUST00000155221	ENSMUSP00000114777	TRANSLATION	nonsense_mediated_decay	-	-	3	86	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000071471	Krtap26-1	ENSMUST00000095934	ENSMUSP00000093626	TRANSLATION	protein_coding	-	CCDS28298.1	-	215	0	0	1.5	210.1	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000022881	Rfc4	ENSMUST00000023598	ENSMUSP00000023598	TRANSLATION	protein_coding	-	CCDS37301.1	1	364	17	8.124	10.8	136.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000022881	Rfc4	ENSMUST00000133847	ENSMUSP00000115479	TRANSLATION	protein_coding	stop	-	5	233	15	5.178	0	64.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022881	Rfc4	ENSMUST00000147321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022881	Rfc4	ENSMUST00000115337	ENSMUSP00000110994	TRANSLATION	nonsense_mediated_decay	-	-	5	92	5	1.47	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000022881	Rfc4	ENSMUST00000115338	ENSMUSP00000110995	TRANSLATION	protein_coding	-	-	1	370	17	7.194	0	99.6	0	-4,-7	-	-	13.926	MINOR
ENSMUSG00000046345	Smco1	ENSMUST00000093183	ENSMUSP00000090873	TRANSLATION	protein_coding	-	CCDS28119.2	5	214	0	0	1.5	385.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000022537	Tmem44	ENSMUST00000140402	ENSMUSP00000123494	TRANSLATION	protein_coding	-	CCDS37310.1	1	433	0	0	0.5	0	9	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000022537	Tmem44	ENSMUST00000153380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022537	Tmem44	ENSMUST00000144491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022537	Tmem44	ENSMUST00000125559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022537	Tmem44	ENSMUST00000149110	ENSMUSP00000116531	TRANSLATION	nonsense_mediated_decay	start	-	1	211	0	0	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000022537	Tmem44	ENSMUST00000089775	ENSMUSP00000087207	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000022537	Tmem44	ENSMUST00000232166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022537	Tmem44	ENSMUST00000144001	ENSMUSP00000119318	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000022537	Tmem44	ENSMUST00000125260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033809	Alg3	ENSMUST00000232319	ENSMUSP00000156269	TRANSLATION	protein_coding	-	-	-	242	0	0	0	245.2	11	-1,-5	-	-	0	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000232451	ENSMUSP00000156184	TRANSLATION	nonsense_mediated_decay	-	-	-	86	0	0	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231471	ENSMUSP00000156022	TRANSLATION	nonsense_mediated_decay	-	-	-	208	0	0	0	138.2	7	-4,-1	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000045918	ENSMUSP00000045272	TRANSLATION	protein_coding	-	CCDS37289.1	1	438	0	0	3.9	475.6	14	-4,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000033809	Alg3	ENSMUST00000231386	ENSMUSP00000156072	TRANSLATION	nonsense_mediated_decay	-	-	-	266	0	0	0	266.5	8	-4,-1	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000123774	ENSMUSP00000123378	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	0	0	0	3	-4,0	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231362	ENSMUSP00000155979	TRANSLATION	nonsense_mediated_decay	-	-	-	128	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231749	ENSMUSP00000156234	TRANSLATION	protein_coding	stop	-	-	188	0	0	0	94.7	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000232458	ENSMUSP00000156158	TRANSLATION	protein_coding	-	-	-	364	0	0	2.4	431.7	11	-4,-7	-	-	3.849	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231387	ENSMUSP00000155988	TRANSLATION	nonsense_mediated_decay	-	-	-	134	0	0	0	94.7	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231904	ENSMUSP00000156363	TRANSLATION	nonsense_mediated_decay	-	-	-	69	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000231531	ENSMUSP00000156241	TRANSLATION	protein_coding	-	-	-	316	0	0	0.5	347.6	11	-1,-5	-	-	0	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000147867	ENSMUSP00000156272	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000033809	Alg3	ENSMUST00000127454	ENSMUSP00000120559	TRANSLATION	nonsense_mediated_decay	start	-	1	173	0	0	0	50.8	4	-4,-2	-	-	-1	MINOR
ENSMUSG00000022678	Nde1	ENSMUST00000127801	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000022678	Nde1	ENSMUST00000023359	ENSMUSP00000023359	TRANSLATION	protein_coding	-	CCDS37263.2	1	344	0	4.53	7.6	163.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000022678	Nde1	ENSMUST00000132316	ENSMUSP00000118005	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022678	Nde1	ENSMUST00000156041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022678	Nde1	ENSMUST00000115795	ENSMUSP00000111461	TRANSLATION	protein_coding	-	CCDS70688.1	1	317	0	4.53	2.9	163.1	0	-4,-5	-	-	12.864	MINOR
ENSMUSG00000022678	Nde1	ENSMUST00000149232	ENSMUSP00000119355	TRANSLATION	protein_coding	start	-	2	175	0	0.7	0	102	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000022678	Nde1	ENSMUST00000133249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000022678	Nde1	ENSMUST00000117958	ENSMUSP00000112817	TRANSLATION	protein_coding	-	CCDS49770.1	1	317	0	4.53	2.9	163.1	0	-4,-5	-	-	12.864	MINOR
ENSMUSG00000062433	Krtap6-2	ENSMUST00000082065	ENSMUSP00000139661	TRANSLATION	protein_coding	-	CCDS79482.1	-	155	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000047293	Gpr15	ENSMUST00000089318	ENSMUSP00000086731	TRANSLATION	protein_coding	-	CCDS49879.1	-	360	0	0.48	1.5	155.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024169	Ift140	ENSMUST00000024983	ENSMUSP00000024983	TRANSLATION	protein_coding	-	CCDS28505.1	1	1464	0	1.24	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000024169	Ift140	ENSMUST00000153895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024169	Ift140	ENSMUST00000140692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024169	Ift140	ENSMUST00000142000	ENSMUSP00000156399	TRANSLATION	protein_coding	-	-	1	1421	0	1.24	0	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000024169	Ift140	ENSMUST00000137386	ENSMUSP00000116163	TRANSLATION	protein_coding	stop	-	5	1232	0	1.24	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024169	Ift140	ENSMUST00000139300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024169	Ift140	ENSMUST00000151776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024169	Ift140	ENSMUST00000232788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024169	Ift140	ENSMUST00000156945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023923	Tbc1d5	ENSMUST00000024717	ENSMUSP00000024717	TRANSLATION	protein_coding	-	CCDS37650.1	1	815	0	3.47	0.5	88.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000023923	Tbc1d5	ENSMUST00000223979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023923	Tbc1d5	ENSMUST00000223758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023923	Tbc1d5	ENSMUST00000224528	ENSMUSP00000153172	TRANSLATION	protein_coding	-	-	-	837	0	3.47	0.5	88.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023923	Tbc1d5	ENSMUST00000224547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023923	Tbc1d5	ENSMUST00000225252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023923	Tbc1d5	ENSMUST00000224977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023923	Tbc1d5	ENSMUST00000225473	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023923	Tbc1d5	ENSMUST00000224123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092618	Btnl6	ENSMUST00000173164	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000092618	Btnl6	ENSMUST00000075483	ENSMUSP00000074927	TRANSLATION	protein_coding	-	CCDS50078.1	5	539	0	3.33	0.5	106.6	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000091530	Cldn20	ENSMUST00000232647	-	NO_TRANSLATION	processed_pseudogene
ENSMUSG00000091530	Cldn20	ENSMUST00000168560	ENSMUSP00000126169	TRANSLATION	protein_coding	-	CCDS49928.1	-	219	0	0.8	1.5	90.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000023915	Tnfrsf21	ENSMUST00000024708	ENSMUSP00000024708	TRANSLATION	protein_coding	-	CCDS28794.1	1	655	0	3.4	3.9	90.2	0	1,2	-	-	13	PRINCIPAL:1
ENSMUSG00000023915	Tnfrsf21	ENSMUST00000233482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043939	A530064D06Rik	ENSMUST00000233384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043939	A530064D06Rik	ENSMUST00000232817	ENSMUSP00000156488	TRANSLATION	nonsense_mediated_decay	-	-	-	160	0	0.64	0.5	56.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000043939	A530064D06Rik	ENSMUST00000233815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043939	A530064D06Rik	ENSMUST00000027764	ENSMUSP00000027764	TRANSLATION	protein_coding	-	CCDS50138.1	1	160	0	0.64	0.5	56.5	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000043939	A530064D06Rik	ENSMUST00000053612	ENSMUSP00000055935	TRANSLATION	protein_coding	-	CCDS28859.1	1	229	0	0.64	0.5	56.5	0	4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000035051	Dhx57	ENSMUST00000234703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035051	Dhx57	ENSMUST00000234733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035051	Dhx57	ENSMUST00000235024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035051	Dhx57	ENSMUST00000038166	ENSMUSP00000041069	TRANSLATION	protein_coding	-	CCDS28990.1	1	1335	10	11.32	0.5	317.6	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000035051	Dhx57	ENSMUST00000086555	ENSMUSP00000083742	TRANSLATION	protein_coding	-	CCDS50188.1	1	1388	10	11.32	1.5	317.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000073408	Mucl3	ENSMUST00000095467	ENSMUSP00000093120	TRANSLATION	protein_coding	-	CCDS28701.1	1	500	0	0	0.5	0	0	0,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000039269	2300002M23Rik	ENSMUST00000044326	ENSMUSP00000038043	TRANSLATION	protein_coding	-	CCDS50092.1	1	349	0	0	0.5	185	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000039269	2300002M23Rik	ENSMUST00000174246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000145205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000166469	ENSMUSP00000127338	TRANSLATION	protein_coding	stop	-	5	189	1	2.33	0	268.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000146770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000165127	ENSMUSP00000126239	TRANSLATION	protein_coding	stop	-	5	161	2	4.08	0	180.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000151306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000130406	ENSMUSP00000119678	TRANSLATION	protein_coding	stop	-	3	76	3	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000024739	ENSMUSP00000024739	TRANSLATION	protein_coding	-	CCDS28812.1	1	724	10	14.4	7.5	857	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000023944	Hsp90ab1	ENSMUST00000163966	ENSMUSP00000131601	TRANSLATION	nonsense_mediated_decay	-	-	5	112	3	2.41	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061126	Cyp4f39	ENSMUST00000003413	ENSMUSP00000003413	TRANSLATION	protein_coding	-	CCDS28618.1	5	532	31	8.36	2.9	409.1	2	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000061126	Cyp4f39	ENSMUST00000237491	ENSMUSP00000158442	TRANSLATION	protein_coding	-	CCDS28618.1	-	532	31	8.36	2.9	409.1	2	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000061126	Cyp4f39	ENSMUST00000235903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061126	Cyp4f39	ENSMUST00000236307	ENSMUSP00000157989	TRANSLATION	protein_coding	stop	-	-	105	0	0.2	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000061126	Cyp4f39	ENSMUST00000236005	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024225	Clps	ENSMUST00000025062	ENSMUSP00000025062	TRANSLATION	protein_coding	-	CCDS28581.1	1	113	0	2.45	2.9	187.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024225	Clps	ENSMUST00000114785	ENSMUSP00000110433	TRANSLATION	protein_coding	-	CCDS84287.1	2	72	0	1.45	2.9	85.2	0	4,-1	-	-	3.552	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000061052	ENSMUSP00000056383	TRANSLATION	protein_coding	-	CCDS50096.1	1	421	23	7.33	3.9	254.6	0	-4,-5	-	-	19.317	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000140292	ENSMUSP00000119039	TRANSLATION	protein_coding	start	-	3	128	0	1.25	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000143114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024426	Atat1	ENSMUST00000077494	ENSMUSP00000076703	TRANSLATION	protein_coding	-	CCDS84305.1	1	398	23	6.58	0.5	254.6	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000149277	ENSMUSP00000122715	TRANSLATION	protein_coding	-	-	1	353	23	7.33	0.5	254.6	0	-4,-5	-	-	18	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000126744	ENSMUSP00000122211	TRANSLATION	nonsense_mediated_decay	start	-	3	131	22	3.25	0	132.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000151009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024426	Atat1	ENSMUST00000056034	ENSMUSP00000053853	TRANSLATION	protein_coding	-	CCDS28711.1	1	310	23	6.58	6.3	254.6	0	-4,-5	-	-	18.909	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000137182	ENSMUSP00000122626	TRANSLATION	nonsense_mediated_decay	start	-	3	35	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000137069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024426	Atat1	ENSMUST00000141132	ENSMUSP00000117824	TRANSLATION	protein_coding	stop	-	5	180	23	5.5	0	236.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024426	Atat1	ENSMUST00000174436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024426	Atat1	ENSMUST00000140990	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024426	Atat1	ENSMUST00000141662	ENSMUSP00000115004	TRANSLATION	protein_coding	-	CCDS50097.1	1	333	23	7.33	7.6	254.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024426	Atat1	ENSMUST00000127959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024426	Atat1	ENSMUST00000130309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050613	Olfr125	ENSMUST00000050255	ENSMUSP00000055221	TRANSLATION	protein_coding	-	CCDS28767.1	-	320	0	0.4	1.5	160.6	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050613	Olfr125	ENSMUST00000213857	ENSMUSP00000149602	TRANSLATION	protein_coding	-	CCDS28767.1	5	320	0	0.4	1.5	160.6	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059481	Plg	ENSMUST00000232767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059481	Plg	ENSMUST00000014578	ENSMUSP00000014578	TRANSLATION	protein_coding	-	CCDS28390.1	1	812	6	17.75	1.5	771.4	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000003546	Klc4	ENSMUST00000003642	ENSMUSP00000003642	TRANSLATION	protein_coding	-	CCDS28832.1	1	619	0	7.275	1.5	178.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003546	Klc4	ENSMUST00000233974	ENSMUSP00000156564	TRANSLATION	protein_coding	-	CCDS28832.1	-	619	0	7.275	1.5	178.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024124	Prss30	ENSMUST00000234765	ENSMUSP00000157077	TRANSLATION	protein_coding	-	CCDS28470.1	-	310	8	5.694	0.5	231.8	0	4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024124	Prss30	ENSMUST00000151448	ENSMUSP00000117647	TRANSLATION	nonsense_mediated_decay	-	-	3	213	4	4.064	0.5	119.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024124	Prss30	ENSMUST00000234145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024124	Prss30	ENSMUST00000123584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024124	Prss30	ENSMUST00000135549	ENSMUSP00000114293	TRANSLATION	protein_coding	stop	-	5	272	8	5.094	0	185	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024124	Prss30	ENSMUST00000147626	ENSMUSP00000118063	TRANSLATION	protein_coding	stop	-	5	61	1	0.264	0	0	0	4,-3	-	-	-1	MINOR
ENSMUSG00000024124	Prss30	ENSMUST00000024936	ENSMUSP00000024936	TRANSLATION	protein_coding	-	CCDS28470.1	1	310	8	5.694	0.5	231.8	0	4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000116672	Gm49630	ENSMUST00000231397	ENSMUSP00000155918	TRANSLATION	protein_coding,RT	start	-	-	164	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000056121	Fez2	ENSMUST00000234530	ENSMUSP00000157338	TRANSLATION	protein_coding	-	-	-	373	0	0	5.1	309.3	0	-4,-5	-	-	7.97	ALTERNATIVE:1
ENSMUSG00000056121	Fez2	ENSMUST00000234052	ENSMUSP00000157187	TRANSLATION	protein_coding	-	-	-	345	0	0	0.5	309.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000056121	Fez2	ENSMUST00000070039	ENSMUSP00000068987	TRANSLATION	protein_coding	-	CCDS28977.1	1	348	0	0	5.1	309.8	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000056121	Fez2	ENSMUST00000234029	ENSMUSP00000157359	TRANSLATION	protein_coding	-	-	-	331	0	0	0.5	309.8	0	-4,-5	-	-	6	MINOR
ENSMUSG00000056121	Fez2	ENSMUST00000234067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056121	Fez2	ENSMUST00000112487	ENSMUSP00000108106	TRANSLATION	protein_coding	-	CCDS70844.1	1	375	0	0	5.1	309.3	0	-4,-5	-	-	7.97	ALTERNATIVE:1
ENSMUSG00000056121	Fez2	ENSMUST00000234601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056121	Fez2	ENSMUST00000234900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024146	Cript	ENSMUST00000160824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024146	Cript	ENSMUST00000024959	ENSMUSP00000024959	TRANSLATION	protein_coding	-	CCDS29012.1	1	101	4	0	21.5	123.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024146	Cript	ENSMUST00000160269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024012	Mtch1	ENSMUST00000235021	ENSMUSP00000157218	TRANSLATION	protein_coding	start	-	-	299	0	0	0	34.3	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000234856	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024012	Mtch1	ENSMUST00000234180	ENSMUSP00000157364	TRANSLATION	nonsense_mediated_decay	start	-	-	112	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000235118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000235097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000127423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000234416	ENSMUSP00000157224	TRANSLATION	nonsense_mediated_decay	start	-	-	63	0	0	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000095427	ENSMUSP00000093077	TRANSLATION	protein_coding	-	CCDS28596.1	1	389	0	0	6.3	32.6	3	-4,-5	-	-	7.7	PRINCIPAL:3
ENSMUSG00000024012	Mtch1	ENSMUST00000234948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000132753	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000234970	ENSMUSP00000157288	TRANSLATION	protein_coding	start	-	-	199	0	0	0	34.3	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000234129	ENSMUSP00000157035	TRANSLATION	protein_coding	start	-	-	311	0	0	0	34.3	3	-1,-4	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000234868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024012	Mtch1	ENSMUST00000234507	ENSMUSP00000157010	TRANSLATION	protein_coding	-	-	-	277	0	0	1.7	34.3	2	-4,-7	-	-	6.264	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000153658	ENSMUSP00000115027	TRANSLATION	protein_coding	start	-	3	294	0	0	0	34.3	3	-1,-4	-	-	-1	MINOR
ENSMUSG00000024012	Mtch1	ENSMUST00000141319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000151739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024012	Mtch1	ENSMUST00000118366	ENSMUSP00000113021	TRANSLATION	protein_coding	-	CCDS84288.1	1	372	0	0	6.3	32.6	3	-4,-5	-	-	7.7	ALTERNATIVE:1
ENSMUSG00000024012	Mtch1	ENSMUST00000235088	ENSMUSP00000157094	TRANSLATION	protein_coding	-	-	-	260	0	0	1.7	34.3	2	-4,-7	-	-	6.264	MINOR
ENSMUSG00000096345	Esp16	ENSMUST00000178037	ENSMUSP00000136148	TRANSLATION	protein_coding	-	CCDS57089.1	1	85	0	0	0.5	82.9	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000109376	Olfr761	ENSMUST00000049620	ENSMUSP00000092917	TRANSLATION	protein_coding	-	CCDS28771.1	-	323	0	0.36	1.5	152.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043286	Pnpla1	ENSMUST00000114737	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043286	Pnpla1	ENSMUST00000056866	ENSMUSP00000050123	TRANSLATION	protein_coding	-	CCDS37533.1	1	599	0	0	0.5	47.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095886	Esp38	ENSMUST00000178880	ENSMUSP00000136698	TRANSLATION	protein_coding	-	CCDS57091.1	5	80	0	0	0.5	82.5	0	2,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000095886	Esp38	ENSMUST00000232743	ENSMUSP00000156650	TRANSLATION	protein_coding	-	-	-	91	0	0	0	82.5	0	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000071037	Camkmt	ENSMUST00000095188	ENSMUSP00000092811	TRANSLATION	protein_coding	-	CCDS37712.1	1	323	0	7.75	2.7	67.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071037	Camkmt	ENSMUST00000234822	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071037	Camkmt	ENSMUST00000234501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096727	Psmb9	ENSMUST00000179593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096727	Psmb9	ENSMUST00000174576	ENSMUSP00000133499	TRANSLATION	protein_coding	-	CCDS28642.1	1	219	4	5.2	3.9	145.7	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000096727	Psmb9	ENSMUST00000237228	ENSMUSP00000157651	TRANSLATION	nonsense_mediated_decay	-	-	-	93	3	2.2	0	69.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096727	Psmb9	ENSMUST00000173831	ENSMUSP00000134120	TRANSLATION	protein_coding	stop	-	3	63	2	1.75	0	55.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096727	Psmb9	ENSMUST00000178857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096727	Psmb9	ENSMUST00000114230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096727	Psmb9	ENSMUST00000171321	ENSMUSP00000128195	TRANSLATION	protein_coding	start	-	2	44	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095330	Gm21834	ENSMUST00000178907	ENSMUSP00000136534	TRANSLATION	protein_coding	stop	-	-	151	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000073396	Esp1	ENSMUST00000233513	ENSMUSP00000156893	TRANSLATION	protein_coding	-	-	-	120	0	1	0.5	123.3	0	-3,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000073396	Esp1	ENSMUST00000161110	ENSMUSP00000123886	TRANSLATION	protein_coding	-	CCDS28785.1	5	102	0	1	0.5	123.3	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000023993	Treml1	ENSMUST00000024792	ENSMUSP00000024792	TRANSLATION	protein_coding	-	-	1	317	0	2	0.5	0	1	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000023993	Treml1	ENSMUST00000223956	ENSMUSP00000153029	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023993	Treml1	ENSMUST00000224001	ENSMUSP00000153300	TRANSLATION	protein_coding	-	CCDS28866.1	-	322	0	2	1.5	0	1	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000023993	Treml1	ENSMUST00000225849	ENSMUSP00000153104	TRANSLATION	protein_coding	-	-	-	243	0	2	0.5	0	1	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000023993	Treml1	ENSMUST00000223968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000076439	Mog	ENSMUST00000102665	ENSMUSP00000099726	TRANSLATION	protein_coding	-	CCDS28734.1	1	247	0	1.4	2.9	52.5	2	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000076439	Mog	ENSMUST00000167275	ENSMUSP00000129489	TRANSLATION	protein_coding	-	-	1	208	0	1.4	1.2	52.5	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000094024	Esp18	ENSMUST00000179848	ENSMUSP00000135980	TRANSLATION	protein_coding	-	CCDS57088.1	5	91	0	0	0.5	97.5	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000044375	Pcare	ENSMUST00000057405	ENSMUSP00000051871	TRANSLATION	protein_coding	-	CCDS28962.1	1	1279	0	0	0.5	1906.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000002289	Angptl4	ENSMUST00000174872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002289	Angptl4	ENSMUST00000173869	ENSMUSP00000133417	TRANSLATION	nonsense_mediated_decay	-	-	1	154	0	0.24	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000002289	Angptl4	ENSMUST00000002360	ENSMUSP00000002360	TRANSLATION	protein_coding	-	CCDS28629.1	1	410	6	4.244	0.5	187.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000002289	Angptl4	ENSMUST00000174858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000121723	ENSMUSP00000113698	TRANSLATION	protein_coding	-	CCDS50028.1	1	1306	0	2	1.5	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000121787	ENSMUSP00000113753	TRANSLATION	protein_coding	-	CCDS50027.1	1	1300	0	2	1.5	290.9	0	-4,-5	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000147109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000126280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000178969	ENSMUSP00000136924	TRANSLATION	protein_coding	-	-	5	1337	0	2	1.5	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000156663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000145357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000117509	ENSMUSP00000112712	TRANSLATION	protein_coding	-	CCDS50029.1	1	1314	0	2	1.5	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000144336	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000115228	ENSMUSP00000110883	TRANSLATION	protein_coding	-	CCDS50025.1	1	1322	0	2	1.5	290.9	0	-4,-5	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000146923	ENSMUSP00000114802	TRANSLATION	nonsense_mediated_decay	-	-	2	1337	0	2	1.5	292.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000120035	ENSMUSP00000114084	TRANSLATION	protein_coding	-	CCDS50024.1	1	1336	0	2	1.5	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000119115	ENSMUSP00000112955	TRANSLATION	protein_coding	-	CCDS50026.1	1	1305	0	2	1.5	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000148360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000115229	ENSMUSP00000110884	TRANSLATION	protein_coding	-	-	5	1345	0	2	1	292.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000152486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000125648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000133198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000132258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000088345	ENSMUSP00000085683	TRANSLATION	protein_coding	-	CCDS37498.1	1	1337	0	2	1.5	292.2	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024163	Mapk8ip3	ENSMUST00000146706	ENSMUSP00000118422	TRANSLATION	protein_coding	stop	-	5	235	0	1	0	52.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024190	Dusp1	ENSMUST00000011196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024190	Dusp1	ENSMUST00000236661	ENSMUSP00000157446	TRANSLATION	protein_coding	-	-	-	174	9	2	0	151.5	0	-4,-6	-	-	11.526	MINOR
ENSMUSG00000024190	Dusp1	ENSMUST00000235532	ENSMUSP00000157700	TRANSLATION	protein_coding	-	-	-	276	9	3.23	0	162.9	0	-4,-7	-	-	14.67	MINOR
ENSMUSG00000024190	Dusp1	ENSMUST00000025025	ENSMUSP00000025025	TRANSLATION	protein_coding	-	CCDS28552.1	1	367	9	3.83	6.3	198.4	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000024190	Dusp1	ENSMUST00000146077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024190	Dusp1	ENSMUST00000126178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023909	Paqr4	ENSMUST00000024702	ENSMUSP00000024702	TRANSLATION	protein_coding	-	CCDS28461.1	1	273	0	1.64	8.8	85.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000023909	Paqr4	ENSMUST00000233776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023921	Mmut	ENSMUST00000233222	ENSMUSP00000156673	TRANSLATION	protein_coding	start	-	-	184	20	3.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023921	Mmut	ENSMUST00000169611	ENSMUSP00000130941	TRANSLATION	protein_coding	-	CCDS37618.1	1	748	65	12.08	5.1	788.2	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000092120	Vmn2r90	ENSMUST00000169805	ENSMUSP00000126650	TRANSLATION	protein_coding	-	CCDS49966.1	5	863	4	4.574	0.5	414.6	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000092120	Vmn2r90	ENSMUST00000231659	ENSMUSP00000156120	TRANSLATION	nonsense_mediated_decay	-	-	-	74	0	0.32	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000092120	Vmn2r90	ENSMUST00000232113	ENSMUSP00000155881	TRANSLATION	nonsense_mediated_decay	-	-	-	120	0	0.32	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000092120	Vmn2r90	ENSMUST00000232078	ENSMUSP00000156025	TRANSLATION	nonsense_mediated_decay	-	-	-	96	0	0.32	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091636	Akain1	ENSMUST00000169935	ENSMUSP00000131134	TRANSLATION	protein_coding	-	CCDS50171.1	1	69	0	0	4.7	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000091636	Akain1	ENSMUST00000233983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002365	Snx9	ENSMUST00000002436	ENSMUSP00000002436	TRANSLATION	protein_coding	-	CCDS57041.1	1	595	0	12.85	7.6	506.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000002365	Snx9	ENSMUST00000231803	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041130	Zfp598	ENSMUST00000234988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041130	Zfp598	ENSMUST00000234956	ENSMUSP00000157172	TRANSLATION	protein_coding	-	CCDS28490.1	-	908	21	0	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000041130	Zfp598	ENSMUST00000047179	ENSMUSP00000038367	TRANSLATION	protein_coding	-	-	1	905	21	0	0.5	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000023942	Slc29a1	ENSMUST00000051574	ENSMUSP00000063096	TRANSLATION	protein_coding	-	CCDS57096.1	5	460	0	0	0.5	426.6	22	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023942	Slc29a1	ENSMUST00000169729	ENSMUSP00000127343	TRANSLATION	protein_coding	stop	-	3	114	0	0	0	0	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000166633	ENSMUSP00000131075	TRANSLATION	protein_coding	stop	-	3	195	0	0	0	68.5	12	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000168274	ENSMUSP00000127754	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000170425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023942	Slc29a1	ENSMUST00000171081	ENSMUSP00000131217	TRANSLATION	protein_coding	stop	-	5	262	0	0	0	147.7	15	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000167863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023942	Slc29a1	ENSMUST00000166119	ENSMUSP00000128763	TRANSLATION	protein_coding	-	CCDS57096.1	5	460	0	0	0.5	426.6	22	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023942	Slc29a1	ENSMUST00000163492	ENSMUSP00000129242	TRANSLATION	protein_coding	-	CCDS28813.1	1	458	0	0	0.5	424.4	22	-4,-5	-	-	5.868	PRINCIPAL:3
ENSMUSG00000023942	Slc29a1	ENSMUST00000163905	ENSMUSP00000129240	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	0	8	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000171978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023942	Slc29a1	ENSMUST00000167332	ENSMUSP00000131483	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000164769	ENSMUSP00000131116	TRANSLATION	protein_coding	-	-	1	358	0	0	0	261.4	19	-4,-5	-	-	0	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000171847	ENSMUSP00000126703	TRANSLATION	protein_coding	-	CCDS28813.1	1	458	0	0	0.5	424.4	22	-4,-5	-	-	5.868	PRINCIPAL:3
ENSMUSG00000023942	Slc29a1	ENSMUST00000164217	ENSMUSP00000131646	TRANSLATION	protein_coding	stop	-	5	262	0	0	0	147.7	15	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000064889	ENSMUSP00000063757	TRANSLATION	protein_coding	-	CCDS28813.1	1	458	0	0	0.5	424.4	22	-4,-5	-	-	5.868	PRINCIPAL:3
ENSMUSG00000023942	Slc29a1	ENSMUST00000171876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023942	Slc29a1	ENSMUST00000170113	ENSMUSP00000128304	TRANSLATION	protein_coding	stop	-	5	56	0	0	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000097317	ENSMUSP00000094923	TRANSLATION	protein_coding	-	CCDS57096.1	1	460	0	0	0.5	426.6	22	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023942	Slc29a1	ENSMUST00000172301	ENSMUSP00000129345	TRANSLATION	protein_coding	stop	-	5	121	0	0	0	0	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000170488	ENSMUSP00000128999	TRANSLATION	protein_coding	stop	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000164618	ENSMUSP00000126934	TRANSLATION	protein_coding	stop	-	3	162	0	0	0	0	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000167195	ENSMUSP00000133162	TRANSLATION	protein_coding	stop	-	3	105	0	0	0	0	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000023942	Slc29a1	ENSMUST00000167692	ENSMUSP00000131976	TRANSLATION	protein_coding	-	CCDS57096.1	1	460	0	0	0.5	426.6	22	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023942	Slc29a1	ENSMUST00000167748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024253	Dync2li1	ENSMUST00000025101	ENSMUSP00000025101	TRANSLATION	protein_coding	-	CCDS29000.1	1	351	19	0	7.5	32.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024253	Dync2li1	ENSMUST00000234861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071266	Zfp946	ENSMUST00000141831	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071266	Zfp946	ENSMUST00000088763	ENSMUSP00000086141	TRANSLATION	protein_coding	-	CCDS50001.1	1	523	44	1.6	0.5	292.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071266	Zfp946	ENSMUST00000167740	ENSMUSP00000132940	TRANSLATION	protein_coding	-	CCDS50001.1	5	523	44	1.6	0.5	292.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071266	Zfp946	ENSMUST00000120222	ENSMUSP00000113244	TRANSLATION	protein_coding	-	CCDS50001.1	1	523	44	1.6	0.5	292.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000052146	Rps10	ENSMUST00000178774	ENSMUSP00000136042	TRANSLATION	protein_coding	-	CCDS37522.1	2	165	0	3.75	10.8	170.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000052146	Rps10	ENSMUST00000152982	ENSMUSP00000156208	TRANSLATION	protein_coding	stop	-	5	107	0	2	0	170.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052146	Rps10	ENSMUST00000114881	ENSMUSP00000110531	TRANSLATION	protein_coding	-	CCDS37522.1	3	165	0	3.75	10.8	170.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000052146	Rps10	ENSMUST00000114882	ENSMUSP00000110532	TRANSLATION	protein_coding	-	CCDS37522.1	1	165	0	3.75	10.8	170.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000052146	Rps10	ENSMUST00000155071	ENSMUSP00000156346	TRANSLATION	protein_coding	-	-	2	169	0	3.25	0	170.1	0	-4,-7	-	-	10.998	MINOR
ENSMUSG00000052146	Rps10	ENSMUST00000145226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052146	Rps10	ENSMUST00000025052	ENSMUSP00000025052	TRANSLATION	protein_coding	-	-	1	154	0	3.05	0	170.1	0	-4,-7	-	-	10.602	MINOR
ENSMUSG00000052146	Rps10	ENSMUST00000150763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000237551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000236118	ENSMUSP00000158447	TRANSLATION	protein_coding	stop	-	-	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033826	Dnah8	ENSMUST00000235567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000236948	ENSMUSP00000157549	TRANSLATION	protein_coding	start	-	-	288	0	4	0	289.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033826	Dnah8	ENSMUST00000237892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000237458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000235390	ENSMUSP00000158051	TRANSLATION	protein_coding	-	CCDS37541.1	-	4731	65	37.09	0.5	2955.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033826	Dnah8	ENSMUST00000237591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033826	Dnah8	ENSMUST00000235388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033826	Dnah8	ENSMUST00000236829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033826	Dnah8	ENSMUST00000236870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000235140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000236647	ENSMUSP00000158125	TRANSLATION	nonsense_mediated_decay	start	-	-	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033826	Dnah8	ENSMUST00000237094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033826	Dnah8	ENSMUST00000235627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000236140	ENSMUSP00000157469	TRANSLATION	protein_coding	-	CCDS37541.1	-	4731	65	37.09	0.5	2955.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033826	Dnah8	ENSMUST00000237432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000237436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000237068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000170651	ENSMUSP00000127878	TRANSLATION	protein_coding	-	CCDS37541.1	1	4731	65	37.09	0.5	2955.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033826	Dnah8	ENSMUST00000235507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033826	Dnah8	ENSMUST00000235136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073413	Ly6g6d	ENSMUST00000172639	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073413	Ly6g6d	ENSMUST00000007259	ENSMUSP00000007259	TRANSLATION	protein_coding	-	CCDS28678.1	1	135	0	0	2.7	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000073413	Ly6g6d	ENSMUST00000172903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073413	Ly6g6d	ENSMUST00000173120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073413	Ly6g6d	ENSMUST00000172745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036568	Bicral	ENSMUST00000233537	ENSMUSP00000156590	TRANSLATION	protein_coding	-	CCDS50126.1	-	1074	0	0	0.5	102.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036568	Bicral	ENSMUST00000040624	ENSMUSP00000044833	TRANSLATION	protein_coding	-	CCDS50126.1	1	1074	0	0	0.5	102.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036568	Bicral	ENSMUST00000233142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036568	Bicral	ENSMUST00000233455	ENSMUSP00000156681	TRANSLATION	protein_coding	stop	-	-	162	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044985	Olfr124	ENSMUST00000053599	ENSMUSP00000050544	TRANSLATION	protein_coding	-	CCDS28766.1	-	315	0	0.42	6.4	167.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044985	Olfr124	ENSMUST00000215168	ENSMUSP00000148904	TRANSLATION	protein_coding	-	CCDS28766.1	5	315	0	0.42	6.4	167.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044985	Olfr124	ENSMUST00000217365	ENSMUSP00000149754	TRANSLATION	protein_coding	-	CCDS28766.1	5	315	0	0.42	6.4	167.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000044985	Olfr124	ENSMUST00000216478	ENSMUSP00000150687	TRANSLATION	protein_coding	-	CCDS28766.1	5	315	0	0.42	6.4	167.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000023908	Pkmyt1	ENSMUST00000233812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023908	Pkmyt1	ENSMUST00000232822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023908	Pkmyt1	ENSMUST00000233954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023908	Pkmyt1	ENSMUST00000233238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023908	Pkmyt1	ENSMUST00000024701	ENSMUSP00000024701	TRANSLATION	protein_coding	-	CCDS28460.1	1	490	15	3.8	5.1	159.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024223	Armc12	ENSMUST00000233114	ENSMUSP00000156782	TRANSLATION	nonsense_mediated_decay	-	-	-	112	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000024223	Armc12	ENSMUST00000232814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024223	Armc12	ENSMUST00000025060	ENSMUSP00000025060	TRANSLATION	protein_coding	-	-	1	330	0	0	1.2	54.5	3	-4,-7	-	-	4.329	MINOR
ENSMUSG00000024223	Armc12	ENSMUST00000233837	ENSMUSP00000156958	TRANSLATION	protein_coding	-	-	-	366	0	0	0	76.8	3	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024223	Armc12	ENSMUST00000233923	ENSMUSP00000156794	TRANSLATION	protein_coding	-	CCDS28579.1	-	340	0	0	3.9	76.8	3	-4,-7	-	-	7	PRINCIPAL:2
ENSMUSG00000039218	Srrm2	ENSMUST00000191385	ENSMUSP00000139901	TRANSLATION	protein_coding	stop	-	2	88	0	2.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000233636	ENSMUSP00000156661	TRANSLATION	protein_coding	stop	-	-	191	0	3.75	0	44	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000186914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039218	Srrm2	ENSMUST00000190568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039218	Srrm2	ENSMUST00000186045	ENSMUSP00000139914	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000190293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039218	Srrm2	ENSMUST00000180975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039218	Srrm2	ENSMUST00000088621	ENSMUSP00000085993	TRANSLATION	protein_coding	-	CCDS37475.1	1	2607	0	4.25	0.5	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000186961	ENSMUSP00000140813	TRANSLATION	protein_coding	stop	-	5	171	0	3.25	0	44	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000186259	ENSMUSP00000140531	TRANSLATION	nonsense_mediated_decay	start	-	3	105	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039218	Srrm2	ENSMUST00000189977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039218	Srrm2	ENSMUST00000190686	ENSMUSP00000139842	TRANSLATION	protein_coding	-	-	5	2703	0	5.75	0.5	44	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036492	Rnf39	ENSMUST00000174669	ENSMUSP00000134113	TRANSLATION	protein_coding	stop	-	3	114	0	0.8	0	62.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036492	Rnf39	ENSMUST00000040498	ENSMUSP00000037860	TRANSLATION	protein_coding	-	CCDS50103.1	1	352	8	1.38	3.9	94.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000036492	Rnf39	ENSMUST00000173072	ENSMUSP00000133710	TRANSLATION	protein_coding	-	-	2	178	8	0.42	0	32.1	0	-4,-5	-	-	9.858	MINOR
ENSMUSG00000024068	Spast	ENSMUST00000225549	ENSMUSP00000153004	TRANSLATION	nonsense_mediated_decay	start	-	-	300	0	4.6	0	0	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000024068	Spast	ENSMUST00000224711	ENSMUSP00000153469	TRANSLATION	protein_coding	-	-	-	613	12	12.93	1.5	159.6	2	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000024068	Spast	ENSMUST00000024869	ENSMUSP00000024869	TRANSLATION	protein_coding	-	CCDS50181.1	1	614	12	12.93	1.5	159.6	2	-3,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000024068	Spast	ENSMUST00000233611	ENSMUSP00000156393	TRANSLATION	protein_coding	-	-	-	581	12	12.93	1.5	159.6	2	-3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000024068	Spast	ENSMUST00000233554	ENSMUSP00000156766	TRANSLATION	protein_coding	start/stop	-	-	191	3	5	0	61.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034998	Foxn2	ENSMUST00000155640	ENSMUSP00000116123	TRANSLATION	protein_coding	stop	-	2	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034998	Foxn2	ENSMUST00000112238	ENSMUSP00000107857	TRANSLATION	protein_coding	-	CCDS29022.2	1	429	0	1.56	0.5	113.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034998	Foxn2	ENSMUST00000134107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034998	Foxn2	ENSMUST00000141052	ENSMUSP00000118378	TRANSLATION	nonsense_mediated_decay	-	-	2	208	0	1	0	101.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015126	Tsr3	ENSMUST00000063574	ENSMUSP00000068511	TRANSLATION	protein_coding	-	CCDS28512.1	1	323	0	2.08	1.5	231.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000044857	Lemd2	ENSMUST00000237257	ENSMUSP00000158443	TRANSLATION	protein_coding	start	-	-	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044857	Lemd2	ENSMUST00000236082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044857	Lemd2	ENSMUST00000236101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044857	Lemd2	ENSMUST00000236055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044857	Lemd2	ENSMUST00000055117	ENSMUSP00000058221	TRANSLATION	protein_coding	-	CCDS50043.1	1	511	0	3	0.5	56.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044857	Lemd2	ENSMUST00000236492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044857	Lemd2	ENSMUST00000237625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024135	Srbd1	ENSMUST00000234951	ENSMUSP00000157062	TRANSLATION	protein_coding	-	-	-	170	0	1.3	0	42.7	0	-4,-6	-	-	0	MINOR
ENSMUSG00000024135	Srbd1	ENSMUST00000095187	ENSMUSP00000092810	TRANSLATION	protein_coding	-	CCDS50204.1	5	981	0	9.82	0.5	276.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024135	Srbd1	ENSMUST00000234761	ENSMUSP00000157302	TRANSLATION	protein_coding	-	-	-	280	0	2.25	0	110.5	0	-4,-6	-	-	0	MINOR
ENSMUSG00000024135	Srbd1	ENSMUST00000234682	ENSMUSP00000157179	TRANSLATION	protein_coding	-	-	-	195	0	1.6	0	42.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024135	Srbd1	ENSMUST00000234595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024135	Srbd1	ENSMUST00000234645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042099	Kank3	ENSMUST00000173789	ENSMUSP00000133625	TRANSLATION	protein_coding	-	-	1	173	0	3.8	0	75.5	0	-4,-5	-	-	3.306	MINOR
ENSMUSG00000042099	Kank3	ENSMUST00000173649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042099	Kank3	ENSMUST00000234426	ENSMUSP00000157095	TRANSLATION	nonsense_mediated_decay	-	-	-	47	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042099	Kank3	ENSMUST00000172649	ENSMUSP00000133760	TRANSLATION	protein_coding	-	-	1	603	0	5.85	0	69.6	0	-4,-7	-	-	7.05	MINOR
ENSMUSG00000042099	Kank3	ENSMUST00000234357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042099	Kank3	ENSMUST00000174608	ENSMUSP00000134656	TRANSLATION	protein_coding	start	-	2	62	0	1.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042099	Kank3	ENSMUST00000234152	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042099	Kank3	ENSMUST00000234655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042099	Kank3	ENSMUST00000173958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042099	Kank3	ENSMUST00000048560	ENSMUSP00000040126	TRANSLATION	protein_coding	-	CCDS28630.1	1	791	0	6.15	0.5	142.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036315	Znrd1	ENSMUST00000113669	ENSMUSP00000109299	TRANSLATION	protein_coding	-	CCDS28730.1	1	123	8	2.578	6.3	57.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036315	Znrd1	ENSMUST00000172518	ENSMUSP00000133651	TRANSLATION	protein_coding	-	CCDS28730.1	1	123	8	2.578	6.3	57.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036315	Znrd1	ENSMUST00000174466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036315	Znrd1	ENSMUST00000172823	ENSMUSP00000133644	TRANSLATION	protein_coding	-	-	5	100	8	2.128	0	57.7	0	-4,-5	-	-	16.95	MINOR
ENSMUSG00000060586	H2-Eb1	ENSMUST00000236232	ENSMUSP00000157594	TRANSLATION	nonsense_mediated_decay	-	-	-	92	0	0.498	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000060586	H2-Eb1	ENSMUST00000074557	ENSMUSP00000074143	TRANSLATION	protein_coding	start	-	1	287	0	3.198	0	218.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060586	H2-Eb1	ENSMUST00000235501	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060586	H2-Eb1	ENSMUST00000235530	ENSMUSP00000158533	TRANSLATION	protein_coding	-	CCDS37584.1	-	264	0	4.098	1.5	218.7	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000060586	H2-Eb1	ENSMUST00000235729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073402	Gm8909	ENSMUST00000040467	ENSMUSP00000036092	TRANSLATION	protein_coding	-	CCDS37610.2	1	368	0	5.23	0.5	365	1	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000073402	Gm8909	ENSMUST00000173625	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073402	Gm8909	ENSMUST00000097335	ENSMUSP00000094947	TRANSLATION	protein_coding	-	-	5	393	0	5.23	0.5	365	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000073402	Gm8909	ENSMUST00000173353	ENSMUSP00000133663	TRANSLATION	protein_coding	-	-	5	396	0	5.23	0.5	365	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000073402	Gm8909	ENSMUST00000174693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023968	Crip3	ENSMUST00000165993	ENSMUSP00000130072	TRANSLATION	protein_coding	-	-	2	244	16	4.72	0	95.6	0	-4,-6	-	-	18	MINOR
ENSMUSG00000023968	Crip3	ENSMUST00000164180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023968	Crip3	ENSMUST00000024764	ENSMUSP00000024764	TRANSLATION	protein_coding	-	CCDS28828.1	1	204	16	4.72	5.1	95.6	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000023968	Crip3	ENSMUST00000113465	ENSMUSP00000109092	TRANSLATION	protein_coding	-	CCDS37635.1	1	205	16	4.72	0.5	95.6	0	-4,-6	-	-	18	MINOR
ENSMUSG00000023968	Crip3	ENSMUST00000169441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023968	Crip3	ENSMUST00000165811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023968	Crip3	ENSMUST00000165750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045417	Vmn1r230	ENSMUST00000233939	ENSMUSP00000156540	TRANSLATION	protein_coding	-	CCDS28429.1	-	316	0	0	1.5	98.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045417	Vmn1r230	ENSMUST00000053974	ENSMUSP00000061330	TRANSLATION	protein_coding	-	CCDS28429.1	-	316	0	0	1.5	98.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045417	Vmn1r230	ENSMUST00000233670	ENSMUSP00000156842	TRANSLATION	protein_coding	-	CCDS28429.1	-	316	0	0	1.5	98.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045417	Vmn1r230	ENSMUST00000232909	ENSMUSP00000156546	TRANSLATION	protein_coding	-	CCDS28429.1	-	316	0	0	1.5	98.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073433	Arhgdig	ENSMUST00000025019	ENSMUSP00000025019	TRANSLATION	protein_coding	-	CCDS28548.1	1	225	0	4.13	3.9	194.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000073433	Arhgdig	ENSMUST00000176847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073433	Arhgdig	ENSMUST00000121959	ENSMUSP00000113186	TRANSLATION	protein_coding	-	-	3	219	0	3.8	0	172.1	0	-4,-6	-	-	10.02	MINOR
ENSMUSG00000073433	Arhgdig	ENSMUST00000155556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000177340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000176983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000079461	ENSMUSP00000078426	TRANSLATION	protein_coding	-	CCDS50037.1	5	1892	0	14.746	0.5	177.1	0	-4,-7	-	-	11.934	PRINCIPAL:2
ENSMUSG00000073434	Wdr90	ENSMUST00000176963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000177031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000176678	ENSMUSP00000135506	TRANSLATION	protein_coding	start/stop	-	3	181	0	2.02	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073434	Wdr90	ENSMUST00000235437	ENSMUSP00000158528	TRANSLATION	protein_coding	start	-	-	314	0	3.57	0	13.7	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000073434	Wdr90	ENSMUST00000176575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000176170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000177170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073434	Wdr90	ENSMUST00000176923	ENSMUSP00000135420	TRANSLATION	protein_coding	-	-	5	1874	0	14.746	0	178.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000073434	Wdr90	ENSMUST00000177017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035929	H2-Q4	ENSMUST00000173975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035929	H2-Q4	ENSMUST00000081435	ENSMUSP00000080159	TRANSLATION	protein_coding	-	CCDS50087.1	1	354	0	4	0.5	362.8	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096278	Dcpp2	ENSMUST00000234110	ENSMUSP00000157331	TRANSLATION	protein_coding	-	CCDS37479.1	-	171	0	1.4	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000096278	Dcpp2	ENSMUST00000088598	ENSMUSP00000085966	TRANSLATION	protein_coding	-	CCDS37479.1	1	171	0	1.4	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000096278	Dcpp2	ENSMUST00000168272	ENSMUSP00000126379	TRANSLATION	protein_coding	-	CCDS37479.1	1	171	0	1.4	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000117136	Gm49835	ENSMUST00000232764	ENSMUSP00000156616	TRANSLATION	protein_coding	-	-	-	86	0	0	0	92.3	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000066878	Gm10184	ENSMUST00000086423	ENSMUSP00000137310	TRANSLATION	protein_coding	-	-	-	529	0	1	10.8	472.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000045575	Vmn1r233	ENSMUST00000056339	ENSMUSP00000062473	TRANSLATION	protein_coding	-	CCDS28433.1	-	319	0	0	0.5	81.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045575	Vmn1r233	ENSMUST00000237195	ENSMUSP00000158452	TRANSLATION	protein_coding	-	CCDS28433.1	-	319	0	0	0.5	81.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000045575	Vmn1r233	ENSMUST00000237629	ENSMUSP00000158355	TRANSLATION	protein_coding	-	CCDS28433.1	-	319	0	0	0.5	81.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000073386	9830107B12Rik	ENSMUST00000063481	ENSMUSP00000070138	TRANSLATION	protein_coding	-	CCDS37645.1	1	160	0	1.8	0.5	50.9	0	4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000073386	9830107B12Rik	ENSMUST00000233614	ENSMUSP00000156923	TRANSLATION	protein_coding	-	-	-	149	0	1	0.5	35.7	1	2,-2	-	-	7.542	MINOR
ENSMUSG00000073386	9830107B12Rik	ENSMUST00000233337	ENSMUSP00000156705	TRANSLATION	protein_coding	-	-	-	198	0	1.8	0.5	50.9	1	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000024299	Adamts10	ENSMUST00000234108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024299	Adamts10	ENSMUST00000173241	ENSMUSP00000134298	TRANSLATION	nonsense_mediated_decay	-	-	2	323	1	0.8	0	116.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000173972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024299	Adamts10	ENSMUST00000174104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024299	Adamts10	ENSMUST00000234715	ENSMUSP00000157264	TRANSLATION	protein_coding	-	-	-	147	0	0	0	78.8	0	3,-1	-	-	0	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000087623	ENSMUSP00000084905	TRANSLATION	protein_coding	-	CCDS37566.1	5	1104	11	9.988	7.5	418.4	0	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000024299	Adamts10	ENSMUST00000174348	ENSMUSP00000133856	TRANSLATION	nonsense_mediated_decay	start	-	1	275	8	5.458	0	87.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000234497	ENSMUSP00000157014	TRANSLATION	protein_coding	-	-	-	215	1	0.8	0	0	0	3,-1	-	-	0	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000174666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024299	Adamts10	ENSMUST00000173013	ENSMUSP00000134181	TRANSLATION	nonsense_mediated_decay	-	-	2	323	1	0.8	0	116.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000174170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024299	Adamts10	ENSMUST00000173931	ENSMUSP00000133434	TRANSLATION	nonsense_mediated_decay	-	-	2	323	1	0.8	0	116.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000173813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024299	Adamts10	ENSMUST00000173030	ENSMUSP00000134549	TRANSLATION	nonsense_mediated_decay	-	-	1	323	1	0.8	0	116.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024299	Adamts10	ENSMUST00000172922	ENSMUSP00000133891	TRANSLATION	nonsense_mediated_decay	-	-	1	347	1	0.8	0	116.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024308	Tapbp	ENSMUST00000234247	ENSMUSP00000157315	TRANSLATION	protein_coding	-	-	-	465	0	6.08	0.5	21.8	2	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000024308	Tapbp	ENSMUST00000025161	ENSMUSP00000025161	TRANSLATION	protein_coding	-	CCDS37572.1	1	466	0	6.08	0.5	21.8	2	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000024308	Tapbp	ENSMUST00000234273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024308	Tapbp	ENSMUST00000172619	ENSMUSP00000134695	TRANSLATION	protein_coding	stop	-	2	119	0	3.08	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000024308	Tapbp	ENSMUST00000234582	ENSMUSP00000157067	TRANSLATION	protein_coding	stop	-	-	46	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024308	Tapbp	ENSMUST00000234320	ENSMUSP00000157028	TRANSLATION	protein_coding	stop	-	-	119	0	2.75	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000024308	Tapbp	ENSMUST00000172489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024308	Tapbp	ENSMUST00000172653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024308	Tapbp	ENSMUST00000172888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024087	Cyp1b1	ENSMUST00000234927	ENSMUSP00000157101	TRANSLATION	nonsense_mediated_decay	start	-	-	289	26	2.525	0	206.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024087	Cyp1b1	ENSMUST00000024894	ENSMUSP00000024894	TRANSLATION	protein_coding	-	CCDS28986.1	1	543	34	4	1.5	333.1	1	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024087	Cyp1b1	ENSMUST00000234361	ENSMUSP00000157049	TRANSLATION	protein_coding	-	-	-	487	33	3.3	0	310.9	1	-2,-5	-	-	14.604	MINOR
ENSMUSG00000024076	Vit	ENSMUST00000232859	ENSMUSP00000156543	TRANSLATION	protein_coding	-	-	-	628	9	5.92	0.5	361.6	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000024076	Vit	ENSMUST00000233470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024076	Vit	ENSMUST00000232864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024076	Vit	ENSMUST00000024880	ENSMUSP00000024880	TRANSLATION	protein_coding	-	CCDS37696.1	1	650	9	5.92	2.7	361.6	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000060550	H2-Q7	ENSMUST00000116598	ENSMUSP00000112297	TRANSLATION	protein_coding	-	CCDS57076.1	5	215	0	2.366	0.5	317.3	0	2,-2	-	-	4.506	MINOR
ENSMUSG00000060550	H2-Q7	ENSMUST00000078205	ENSMUSP00000077335	TRANSLATION	protein_coding	-	CCDS57075.1	5	310	0	3.366	0.5	377.7	0	2,-2	-	-	10.134	MINOR
ENSMUSG00000060550	H2-Q7	ENSMUST00000071951	ENSMUSP00000071843	TRANSLATION	protein_coding	-	CCDS28697.1	1	334	0	4.3	0.5	377.7	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000060550	H2-Q7	ENSMUST00000173788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060550	H2-Q7	ENSMUST00000076256	ENSMUSP00000075606	TRANSLATION	protein_coding	-	-	5	325	0	4.05	0	377.7	0	2,-2	-	-	11.502	ALTERNATIVE:2
ENSMUSG00000060550	H2-Q7	ENSMUST00000173016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017831	Rab5a	ENSMUST00000233347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000017831	Rab5a	ENSMUST00000017975	ENSMUSP00000017975	TRANSLATION	protein_coding	-	CCDS28879.1	1	215	20	4.6	19.5	210.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000054128	H2-T3	ENSMUST00000102675	ENSMUSP00000099736	TRANSLATION	protein_coding	-	CCDS28718.1	1	384	3	5.95	0.5	332.3	1	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000054128	H2-T3	ENSMUST00000025312	ENSMUSP00000025312	TRANSLATION	protein_coding	-	-	1	340	3	4.95	0.5	182.1	1	1,-3	-	-	7.002	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000173435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054128	H2-T3	ENSMUST00000172663	ENSMUSP00000134547	TRANSLATION	nonsense_mediated_decay	-	-	1	220	3	3.75	0	279.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000174101	ENSMUSP00000138563	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0.75	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000173629	ENSMUSP00000134607	TRANSLATION	nonsense_mediated_decay	-	-	1	119	1	1.75	0	134.6	0	1,-2	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000173133	ENSMUSP00000134469	TRANSLATION	nonsense_mediated_decay	-	-	5	384	3	5.95	0.5	332.3	1	1,-3	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000095300	ENSMUSP00000138582	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0.75	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000097329	ENSMUSP00000138177	TRANSLATION	protein_coding	stop	-	1	68	0	0.75	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000054128	H2-T3	ENSMUST00000173577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048826	Dact2	ENSMUST00000232816	ENSMUSP00000156781	TRANSLATION	protein_coding	stop	-	-	150	0	0	0	214.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000048826	Dact2	ENSMUST00000053218	ENSMUSP00000051638	TRANSLATION	protein_coding	-	CCDS28406.1	1	757	0	0	0.5	761	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000073418	C4b	ENSMUST00000069507	ENSMUSP00000069418	TRANSLATION	protein_coding	-	CCDS28657.1	1	1738	2	37.5	1.5	740.3	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000073418	C4b	ENSMUST00000173057	ENSMUSP00000134611	TRANSLATION	nonsense_mediated_decay	start	-	5	62	0	1.5	0	62.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073418	C4b	ENSMUST00000173669	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092558	Med20	ENSMUST00000149893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092558	Med20	ENSMUST00000138638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092558	Med20	ENSMUST00000024778	ENSMUSP00000024778	TRANSLATION	protein_coding	-	CCDS28851.1	1	212	0	0	13	163.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000092558	Med20	ENSMUST00000133855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000166663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000163941	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000165686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023952	Gtpbp2	ENSMUST00000166252	ENSMUSP00000128049	TRANSLATION	nonsense_mediated_decay	start	-	3	36	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023952	Gtpbp2	ENSMUST00000169955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023952	Gtpbp2	ENSMUST00000167681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000166563	ENSMUSP00000127896	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023952	Gtpbp2	ENSMUST00000166701	ENSMUSP00000131772	TRANSLATION	protein_coding	start	-	2	253	0	2.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023952	Gtpbp2	ENSMUST00000167404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000171901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023952	Gtpbp2	ENSMUST00000169383	ENSMUSP00000133050	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023952	Gtpbp2	ENSMUST00000169778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000172170	ENSMUSP00000128517	TRANSLATION	protein_coding	-	-	5	604	16	4.9	0	87.7	0	-4,-5	-	-	17.04	MINOR
ENSMUSG00000023952	Gtpbp2	ENSMUST00000169798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023952	Gtpbp2	ENSMUST00000024748	ENSMUSP00000024748	TRANSLATION	protein_coding	-	CCDS50122.1	1	602	16	5.38	7.5	87.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000023952	Gtpbp2	ENSMUST00000164338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023952	Gtpbp2	ENSMUST00000169918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024171	Prss28	ENSMUST00000234259	ENSMUSP00000156975	TRANSLATION	protein_coding	-	CCDS28515.1	-	274	5	3.6	0.5	191	0	1,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000024171	Prss28	ENSMUST00000015267	ENSMUSP00000015267	TRANSLATION	protein_coding	-	CCDS28515.1	1	274	5	3.6	0.5	191	0	1,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000023903	Mmp25	ENSMUST00000233764	ENSMUSP00000156468	TRANSLATION	nonsense_mediated_decay	-	-	-	179	1	1.2	0	40.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000023903	Mmp25	ENSMUST00000024696	ENSMUSP00000024696	TRANSLATION	protein_coding	-	CCDS28452.1	1	615	19	5.95	1.5	351.3	1	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023903	Mmp25	ENSMUST00000233276	ENSMUSP00000156672	TRANSLATION	nonsense_mediated_decay	-	-	-	178	1	1.2	0	40.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000024028	Tff2	ENSMUST00000024826	ENSMUSP00000024826	TRANSLATION	protein_coding	-	CCDS37545.1	1	129	0	2.15	2.7	98.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038141	Tmem181a	ENSMUST00000088940	ENSMUSP00000086333	TRANSLATION	protein_coding	-	CCDS37425.1	1	474	0	0	2.7	326	8	-2,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000038141	Tmem181a	ENSMUST00000228334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038141	Tmem181a	ENSMUST00000232383	ENSMUSP00000156382	TRANSLATION	protein_coding	-	-	-	515	0	0	0.5	326	8	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000038141	Tmem181a	ENSMUST00000231593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024116	Prss21	ENSMUST00000024928	ENSMUSP00000024928	TRANSLATION	protein_coding	-	CCDS28468.1	1	324	9	3.24	0.5	222.5	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024116	Prss21	ENSMUST00000235013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040771	Oard1	ENSMUST00000167180	ENSMUSP00000130802	TRANSLATION	protein_coding	-	CCDS37647.1	1	152	0	4	10.8	28.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040771	Oard1	ENSMUST00000046651	ENSMUSP00000039280	TRANSLATION	protein_coding	-	CCDS37647.1	1	152	0	4	10.8	28.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040771	Oard1	ENSMUST00000233426	ENSMUSP00000156587	TRANSLATION	protein_coding	-	-	-	74	0	1.5	0	0	0	-4,-5	-	-	1.002	MINOR
ENSMUSG00000090897	Gm44501	ENSMUST00000232739	ENSMUSP00000156700	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	65	0	0	0	29.8	0	-3,-7	-	-	-1	MINOR
ENSMUSG00000090897	Gm44501	ENSMUST00000167713	ENSMUSP00000128205	TRANSLATION	protein_coding	-	CCDS70814.1	2	150	0	0	0.5	127.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000051682	Treml4	ENSMUST00000154335	ENSMUSP00000118772	TRANSLATION	protein_coding	-	CCDS50139.1	1	264	0	1.53	0.5	44.4	2	1,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000051682	Treml4	ENSMUST00000153420	ENSMUSP00000115290	TRANSLATION	protein_coding	stop	-	1	223	0	1.53	0	44.4	0	1,-2	-	-	-1	MINOR
ENSMUSG00000051682	Treml4	ENSMUST00000136272	ENSMUSP00000120550	TRANSLATION	protein_coding	-	CCDS50140.1	1	255	0	1.2	0.5	44.4	2	1,-2	-	-	10.704	MINOR
ENSMUSG00000051682	Treml4	ENSMUST00000059873	ENSMUSP00000054121	TRANSLATION	protein_coding	-	CCDS28862.1	1	263	0	1.53	0.5	44.4	2	1,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000051682	Treml4	ENSMUST00000125426	ENSMUSP00000119177	TRANSLATION	protein_coding	-	CCDS50141.1	1	259	0	1.53	0.5	44.4	2	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000051682	Treml4	ENSMUST00000153131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000172803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000046022	ENSMUSP00000036265	TRANSLATION	protein_coding	-	CCDS28661.1	1	1244	13	14.99	7.5	359.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040356	Skiv2l	ENSMUST00000172966	ENSMUSP00000134294	TRANSLATION	nonsense_mediated_decay	-	-	5	92	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040356	Skiv2l	ENSMUST00000174226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000174887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000173415	ENSMUSP00000134209	TRANSLATION	protein_coding	start/stop	-	3	242	0	2.2	0	57.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040356	Skiv2l	ENSMUST00000173403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000172878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000172686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000174363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040356	Skiv2l	ENSMUST00000173305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000114303	ENSMUSP00000133546	TRANSLATION	protein_coding	stop	-	5	234	29	5.816	0	162.9	0	-2,2	-	-	-1	MINOR
ENSMUSG00000073422	H2-Ke6	ENSMUST00000235579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000173616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000045467	ENSMUSP00000038069	TRANSLATION	protein_coding	-	CCDS50071.1	1	259	29	6.5	8.8	172.1	0	-2,2	-	-	20.802	PRINCIPAL:1
ENSMUSG00000073422	H2-Ke6	ENSMUST00000237759	ENSMUSP00000157769	TRANSLATION	protein_coding	-	-	-	274	29	6.6	1	172.1	0	-2,2	-	-	18	MINOR
ENSMUSG00000073422	H2-Ke6	ENSMUST00000170644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000173894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000236164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000236627	ENSMUSP00000158064	TRANSLATION	protein_coding	-	-	-	147	15	4.25	0	112.8	0	-4,-6	-	-	3.744	MINOR
ENSMUSG00000073422	H2-Ke6	ENSMUST00000174399	ENSMUSP00000157935	TRANSLATION	protein_coding	stop	-	5	138	15	4.25	0	112.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073422	H2-Ke6	ENSMUST00000173425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073422	H2-Ke6	ENSMUST00000174029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092244	Esp34	ENSMUST00000173055	ENSMUSP00000133675	TRANSLATION	protein_coding	-	-	1	151	0	0	0	38.3	0	-4,-2	-	-	5.634	ALTERNATIVE:2
ENSMUSG00000092244	Esp34	ENSMUST00000178654	ENSMUSP00000136619	TRANSLATION	protein_coding	-	CCDS57084.1	1	83	0	0	0.5	40.8	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000011486	Slc25a41	ENSMUST00000058661	ENSMUSP00000058877	TRANSLATION	protein_coding	-	CCDS37668.1	1	312	14	3.36	1.5	202.4	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000011486	Slc25a41	ENSMUST00000169012	ENSMUSP00000130857	TRANSLATION	protein_coding	-	CCDS84326.1	1	298	14	3.36	0.5	202.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019489	Cd70	ENSMUST00000019633	ENSMUSP00000019633	TRANSLATION	protein_coding	-	CCDS28927.1	1	195	0	0	1.5	25	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000013236	Ptprs	ENSMUST00000223783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000223671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000225381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013236	Ptprs	ENSMUST00000223691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000223685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000223706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000224006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000223742	ENSMUSP00000153335	TRANSLATION	protein_coding	stop	-	-	48	0	0.5	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000223642	ENSMUSP00000153533	TRANSLATION	protein_coding	start/stop	-	-	208	0	4.8	0	43.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000225456	ENSMUSP00000153398	TRANSLATION	protein_coding	start/stop	-	-	448	0	7.728	0	162.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000224193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000225785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013236	Ptprs	ENSMUST00000225379	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013236	Ptprs	ENSMUST00000224777	ENSMUSP00000153612	TRANSLATION	protein_coding	start/stop	-	-	208	0	4.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000224522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000224571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000086828	ENSMUSP00000084038	TRANSLATION	protein_coding	-	CCDS57103.1	1	1501	22	24.98	4.1	837.7	2	3,-1	-	-	7	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000143018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013236	Ptprs	ENSMUST00000223859	ENSMUSP00000153134	TRANSLATION	protein_coding	-	-	-	1497	22	24.98	4.1	837.7	2	3,-1	-	-	7	MINOR
ENSMUSG00000013236	Ptprs	ENSMUST00000225104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013236	Ptprs	ENSMUST00000067538	ENSMUSP00000064048	TRANSLATION	protein_coding	-	CCDS37664.1	1	1907	22	30.18	4.1	990.3	2	3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000056692	Ilrun	ENSMUST00000114863	ENSMUSP00000110513	TRANSLATION	protein_coding	-	CCDS28569.1	1	291	0	1.08	7.9	155.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000056692	Ilrun	ENSMUST00000233131	ENSMUSP00000156539	TRANSLATION	protein_coding	-	-	-	225	0	0.6	2.4	70.3	0	-4,-5	-	-	4.815	MINOR
ENSMUSG00000056692	Ilrun	ENSMUST00000075076	ENSMUSP00000074585	TRANSLATION	protein_coding	-	-	1	295	0	1.08	0	155.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000056692	Ilrun	ENSMUST00000233035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056692	Ilrun	ENSMUST00000233508	ENSMUSP00000156684	TRANSLATION	protein_coding	-	-	-	238	0	1.08	0.5	141.1	0	-4,-5	-	-	11.118	MINOR
ENSMUSG00000056692	Ilrun	ENSMUST00000114859	ENSMUSP00000110509	TRANSLATION	protein_coding	-	CCDS37523.1	1	216	0	1.08	3.9	155.8	0	-4,-5	-	-	13.26	MINOR
ENSMUSG00000056692	Ilrun	ENSMUST00000233533	ENSMUSP00000156628	TRANSLATION	protein_coding	-	-	-	223	0	1.08	0	155.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000041831	Sytl3	ENSMUST00000115763	ENSMUSP00000111429	TRANSLATION	nonsense_mediated_decay	-	-	5	178	8	2	0.5	83.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041831	Sytl3	ENSMUST00000160483	ENSMUSP00000123996	TRANSLATION	protein_coding	-	CCDS28373.2	1	402	0	3.68	2.9	115.1	0	-4,-6	-	-	3.631	MINOR
ENSMUSG00000041831	Sytl3	ENSMUST00000232151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041831	Sytl3	ENSMUST00000162635	ENSMUSP00000124496	TRANSLATION	nonsense_mediated_decay	-	-	2	179	8	2	0	83.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041831	Sytl3	ENSMUST00000231743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041831	Sytl3	ENSMUST00000161118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041831	Sytl3	ENSMUST00000160771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041831	Sytl3	ENSMUST00000162013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041831	Sytl3	ENSMUST00000097430	ENSMUSP00000095041	TRANSLATION	protein_coding	-	CCDS28372.2	1	607	8	5.68	3.9	198.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000041831	Sytl3	ENSMUST00000159394	ENSMUSP00000124146	TRANSLATION	nonsense_mediated_decay	-	-	2	141	8	1.4	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041831	Sytl3	ENSMUST00000232362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005370	Msh6	ENSMUST00000234756	ENSMUSP00000157173	TRANSLATION	protein_coding	stop	-	-	167	0	2.066	0	84.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005370	Msh6	ENSMUST00000234936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005370	Msh6	ENSMUST00000005503	ENSMUSP00000005503	TRANSLATION	protein_coding	-	CCDS29021.1	1	1358	12	8.91	0.5	671.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000091601	Olfr93	ENSMUST00000171679	ENSMUSP00000125907	TRANSLATION	protein_coding	-	CCDS28736.1	-	312	0	1.12	6.3	168.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000091601	Olfr93	ENSMUST00000208003	ENSMUSP00000146548	TRANSLATION	nonsense_mediated_decay	start	-	3	170	0	0.24	0	79.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000091601	Olfr93	ENSMUST00000219235	ENSMUSP00000151672	TRANSLATION	protein_coding	-	CCDS28736.1	5	312	0	1.12	6.3	168.7	7	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000037649	H2-DMa	ENSMUST00000237402	ENSMUSP00000158155	TRANSLATION	protein_coding	-	-	-	41	0	0.2	0	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000037649	H2-DMa	ENSMUST00000236322	ENSMUSP00000157660	TRANSLATION	protein_coding	-	CCDS37579.1	-	261	0	4.05	1.5	120.2	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000037649	H2-DMa	ENSMUST00000237476	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037649	H2-DMa	ENSMUST00000235910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037649	H2-DMa	ENSMUST00000042121	ENSMUSP00000037088	TRANSLATION	protein_coding	-	CCDS37579.1	1	261	0	4.05	1.5	120.2	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000037649	H2-DMa	ENSMUST00000235408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037649	H2-DMa	ENSMUST00000236938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037649	H2-DMa	ENSMUST00000173907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096445	Dcpp1	ENSMUST00000068580	ENSMUSP00000064663	TRANSLATION	protein_coding	-	CCDS37478.1	2	171	0	1.4	0.5	0	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000079491	H2-T10	ENSMUST00000166442	ENSMUSP00000127602	TRANSLATION	protein_coding	-	-	5	379	0	4.717	0.5	217.3	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000079491	H2-T10	ENSMUST00000174625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079491	H2-T10	ENSMUST00000174382	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000024053	Emilin2	ENSMUST00000024849	ENSMUSP00000024849	TRANSLATION	protein_coding	-	-	1	1073	0	3.1134	0.5	100	0	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000024053	Emilin2	ENSMUST00000233057	ENSMUSP00000156446	TRANSLATION	protein_coding	-	CCDS37686.1	-	1074	0	3.1134	0.5	100	0	2,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000024053	Emilin2	ENSMUST00000233677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024053	Emilin2	ENSMUST00000233148	ENSMUSP00000156837	TRANSLATION	protein_coding	stop	-	-	122	0	2.3134	0	37.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024053	Emilin2	ENSMUST00000233659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024053	Emilin2	ENSMUST00000232777	ENSMUSP00000156894	TRANSLATION	protein_coding	-	-	-	1063	0	2.8824	0.5	96	0	2,-2	-	-	11.298	ALTERNATIVE:2
ENSMUSG00000024053	Emilin2	ENSMUST00000233343	ENSMUSP00000156856	TRANSLATION	protein_coding	stop	-	-	95	0	0	0	34.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024053	Emilin2	ENSMUST00000233083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024053	Emilin2	ENSMUST00000233728	ENSMUSP00000156732	TRANSLATION	protein_coding	stop	-	-	98	0	0	0	37.3	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024053	Emilin2	ENSMUST00000233245	ENSMUSP00000156676	TRANSLATION	protein_coding	-	-	-	993	0	3.1134	0.5	79.1	0	-4,-1	-	-	10.746	MINOR
ENSMUSG00000024053	Emilin2	ENSMUST00000233698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117406	Ntn3	ENSMUST00000024931	ENSMUSP00000024931	TRANSLATION	protein_coding	-	CCDS28478.1	1	580	0	4.13	3.9	321.3	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000117406	Ntn3	ENSMUST00000234909	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117406	Ntn3	ENSMUST00000234451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117406	Ntn3	ENSMUST00000234420	ENSMUSP00000157203	TRANSLATION	nonsense_mediated_decay	-	-	-	269	0	0.7	0	103.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000234700	ENSMUSP00000157299	TRANSLATION	protein_coding	start	-	-	812	0	0.88	0	260.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000234439	ENSMUSP00000157111	TRANSLATION	protein_coding	start/stop	-	-	183	0	0	0	38.3	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000234546	ENSMUSP00000157312	TRANSLATION	protein_coding	start/stop	-	-	244	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000234059	ENSMUSP00000157204	TRANSLATION	nonsense_mediated_decay	start	-	-	103	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000234964	ENSMUSP00000156992	TRANSLATION	protein_coding	start/stop	-	-	211	0	1.42	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024074	Crim1	ENSMUST00000112498	ENSMUSP00000108117	TRANSLATION	protein_coding	-	CCDS28976.1	1	1037	0	2.3	6.3	355	1	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000024180	Tmem8	ENSMUST00000237058	ENSMUSP00000157750	TRANSLATION	protein_coding	-	-	-	630	0	0	0	0	5	3,-1	-	-	0	MINOR
ENSMUSG00000024180	Tmem8	ENSMUST00000235821	ENSMUSP00000157497	TRANSLATION	protein_coding	-	-	-	720	0	0	0	70	11	3,-1	-	-	0.402	MINOR
ENSMUSG00000024180	Tmem8	ENSMUST00000236993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024180	Tmem8	ENSMUST00000236047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024180	Tmem8	ENSMUST00000128597	ENSMUSP00000121651	TRANSLATION	protein_coding	-	-	5	747	0	0	0	163.3	9	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000024180	Tmem8	ENSMUST00000025010	ENSMUSP00000025010	TRANSLATION	protein_coding	-	CCDS28546.1	1	769	0	0	1.5	163.3	9	3,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000024218	Taf11	ENSMUST00000155667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024218	Taf11	ENSMUST00000025057	ENSMUSP00000025057	TRANSLATION	protein_coding	-	CCDS28571.1	1	211	0	2.75	3.9	136.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000024218	Taf11	ENSMUST00000233439	ENSMUSP00000156447	TRANSLATION	nonsense_mediated_decay	-	-	-	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024218	Taf11	ENSMUST00000232820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024218	Taf11	ENSMUST00000233681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024218	Taf11	ENSMUST00000233106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024218	Taf11	ENSMUST00000233306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024218	Taf11	ENSMUST00000114848	ENSMUSP00000110498	TRANSLATION	protein_coding	-	CCDS28571.1	1	211	0	2.75	3.9	136.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000024436	Mrps18b	ENSMUST00000173792	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024436	Mrps18b	ENSMUST00000174574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024436	Mrps18b	ENSMUST00000113782	ENSMUSP00000109412	TRANSLATION	protein_coding	-	CCDS84307.1	1	162	0	3.844	0.5	52.4	0	-2,-7	-	-	5.766	MINOR
ENSMUSG00000024436	Mrps18b	ENSMUST00000172642	ENSMUSP00000134183	TRANSLATION	protein_coding	start	-	5	106	2	3.014	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024436	Mrps18b	ENSMUST00000174807	ENSMUSP00000133584	TRANSLATION	protein_coding	start	-	3	188	2	4.764	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024436	Mrps18b	ENSMUST00000025305	ENSMUSP00000025305	TRANSLATION	protein_coding	-	CCDS28712.1	1	254	2	6.594	2.9	59.7	0	-3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024436	Mrps18b	ENSMUST00000173737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024436	Mrps18b	ENSMUST00000174349	ENSMUSP00000134264	TRANSLATION	protein_coding	start	-	3	111	2	3.014	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000117190	Esp5	ENSMUST00000233672	ENSMUSP00000156402	TRANSLATION	protein_coding,RT	-	CCDS70814.1	-	150	0	0	0.5	127.7	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000023992	Trem2	ENSMUST00000148545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023992	Trem2	ENSMUST00000113237	ENSMUSP00000108863	TRANSLATION	protein_coding	-	CCDS70825.1	1	249	0	1.1	0.5	32.5	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000023992	Trem2	ENSMUST00000132340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023992	Trem2	ENSMUST00000024791	ENSMUSP00000024791	TRANSLATION	protein_coding	-	CCDS28865.1	1	227	0	1.1	0.5	32.5	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000116564	Riok2	ENSMUST00000232199	ENSMUSP00000155859	TRANSLATION	protein_coding	stop	-	-	129	11	2.68	0	141.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000116564	Riok2	ENSMUST00000232396	ENSMUSP00000156350	TRANSLATION	protein_coding	-	-	-	477	18	6.08	0	297.2	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000116564	Riok2	ENSMUST00000024620	ENSMUSP00000024620	TRANSLATION	protein_coding	-	CCDS28417.1	1	547	18	6.08	0.5	297.2	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000045394	Epcam	ENSMUST00000234623	ENSMUSP00000157040	TRANSLATION	protein_coding	-	CCDS29018.1	-	315	0	6.75	6.3	45.6	1	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000045394	Epcam	ENSMUST00000234009	ENSMUSP00000157099	TRANSLATION	protein_coding	stop	-	-	111	0	2.25	0	23.4	0	3,-2	-	-	-1	MINOR
ENSMUSG00000045394	Epcam	ENSMUST00000053577	ENSMUSP00000061935	TRANSLATION	protein_coding	-	CCDS29018.1	5	315	0	6.75	6.3	45.6	1	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000045394	Epcam	ENSMUST00000235125	ENSMUSP00000157220	TRANSLATION	protein_coding	stop	-	-	48	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000045394	Epcam	ENSMUST00000234354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054940	Olfr137	ENSMUST00000057394	ENSMUSP00000051537	TRANSLATION	protein_coding	-	CCDS28780.1	-	312	0	0.42	4.1	165.9	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000054940	Olfr137	ENSMUST00000213505	ENSMUSP00000150173	TRANSLATION	protein_coding	-	CCDS28780.1	5	312	0	0.42	4.1	165.9	6	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000024248	Cox7a2l	ENSMUST00000025095	ENSMUSP00000025095	TRANSLATION	protein_coding	-	CCDS28995.1	1	111	0	1.2	15.5	28.9	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000024248	Cox7a2l	ENSMUST00000234258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024248	Cox7a2l	ENSMUST00000235085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024248	Cox7a2l	ENSMUST00000167741	ENSMUSP00000131584	TRANSLATION	protein_coding	-	CCDS50194.1	1	134	0	0.825	0.5	0	0	-4,-6	-	-	4.128	MINOR
ENSMUSG00000023995	Tspo2	ENSMUST00000162481	ENSMUSP00000124308	TRANSLATION	protein_coding	-	-	5	68	0	0.9	0	26.5	2	-4,-5	-	-	2.364	MINOR
ENSMUSG00000023995	Tspo2	ENSMUST00000160259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023995	Tspo2	ENSMUST00000024794	ENSMUSP00000024794	TRANSLATION	protein_coding	-	CCDS28869.1	1	162	0	3.2	1.5	110.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023995	Tspo2	ENSMUST00000159478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023995	Tspo2	ENSMUST00000159988	ENSMUSP00000124843	TRANSLATION	protein_coding	-	-	5	134	0	2.6	0	73.4	6	-4,-5	-	-	8.58	MINOR
ENSMUSG00000034482	Ly6g5c	ENSMUST00000037849	ENSMUSP00000039151	TRANSLATION	protein_coding	-	CCDS28682.1	1	149	0	0	1.5	0	0	0,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000024008	Cpne5	ENSMUST00000126755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024008	Cpne5	ENSMUST00000024805	ENSMUSP00000024805	TRANSLATION	protein_coding	-	CCDS28592.1	1	593	13	2.75	7.5	412.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024008	Cpne5	ENSMUST00000234157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024008	Cpne5	ENSMUST00000234042	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024008	Cpne5	ENSMUST00000124917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024008	Cpne5	ENSMUST00000126993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024008	Cpne5	ENSMUST00000137727	ENSMUSP00000117982	TRANSLATION	protein_coding	stop	-	5	307	13	2.75	0	108.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064120	Mocs1	ENSMUST00000165390	ENSMUSP00000132371	TRANSLATION	protein_coding	-	-	1	143	7	1.699	0	49.4	0	-4,0	-	-	6	MINOR
ENSMUSG00000064120	Mocs1	ENSMUST00000024797	ENSMUSP00000024797	TRANSLATION	protein_coding	-	CCDS57100.1	5	385	7	5.749	1.5	253.4	0	-4,0	-	-	10.398	MINOR
ENSMUSG00000064120	Mocs1	ENSMUST00000173362	ENSMUSP00000134265	TRANSLATION	nonsense_mediated_decay	-	-	5	228	7	2.499	0	81.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000064120	Mocs1	ENSMUST00000174268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064120	Mocs1	ENSMUST00000173033	ENSMUSP00000133694	TRANSLATION	protein_coding	-	CCDS50143.1	1	636	7	6.549	1.5	411.3	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000064120	Mocs1	ENSMUST00000173430	ENSMUSP00000133761	TRANSLATION	protein_coding	start	-	3	98	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000064120	Mocs1	ENSMUST00000174647	ENSMUSP00000133713	TRANSLATION	nonsense_mediated_decay	-	-	5	52	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000171233	ENSMUSP00000126111	TRANSLATION	protein_coding	-	CCDS37548.1	1	531	0	3.593	1.7	108.8	20	-4,-7	-	-	11.718	PRINCIPAL:1
ENSMUSG00000024036	Slc37a1	ENSMUST00000235564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024036	Slc37a1	ENSMUST00000236251	ENSMUSP00000157617	TRANSLATION	protein_coding	stop	-	-	430	0	3.733	0	106.9	18	-4,-7	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000237835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024036	Slc37a1	ENSMUST00000237389	ENSMUSP00000158467	TRANSLATION	protein_coding	stop	-	-	87	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000235972	ENSMUSP00000157739	TRANSLATION	protein_coding	stop	-	-	18	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000237928	ENSMUSP00000158451	TRANSLATION	protein_coding	start	-	-	359	0	2.555	0	89.2	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000236467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024036	Slc37a1	ENSMUST00000237425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024036	Slc37a1	ENSMUST00000237460	ENSMUSP00000158034	TRANSLATION	protein_coding	stop	-	-	108	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000237980	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024036	Slc37a1	ENSMUST00000235261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024036	Slc37a1	ENSMUST00000235230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024036	Slc37a1	ENSMUST00000237932	ENSMUSP00000157478	TRANSLATION	protein_coding	stop	-	-	83	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000236147	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024036	Slc37a1	ENSMUST00000165149	ENSMUSP00000128223	TRANSLATION	protein_coding	-	CCDS37548.1	1	531	0	3.593	1.7	108.8	20	-4,-7	-	-	11.718	PRINCIPAL:1
ENSMUSG00000024036	Slc37a1	ENSMUST00000236710	ENSMUSP00000157526	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024036	Slc37a1	ENSMUST00000235220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003929	Zfp81	ENSMUST00000054072	ENSMUSP00000050728	TRANSLATION	protein_coding	-	CCDS37564.1	1	531	44	2.6	1.5	197.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000003929	Zfp81	ENSMUST00000234016	ENSMUSP00000157222	TRANSLATION	protein_coding	stop	-	-	424	38	0.6	0	105.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003929	Zfp81	ENSMUST00000235063	ENSMUSP00000157178	TRANSLATION	nonsense_mediated_decay	-	-	-	56	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023973	Cnpy3	ENSMUST00000059844	ENSMUSP00000050309	TRANSLATION	protein_coding	-	CCDS28839.1	1	276	0	0	2.9	163.2	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000023973	Cnpy3	ENSMUST00000145877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023973	Cnpy3	ENSMUST00000148656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023973	Cnpy3	ENSMUST00000121671	ENSMUSP00000113350	TRANSLATION	protein_coding	-	-	2	118	0	0	0	35	0	0,-4	-	-	0	MINOR
ENSMUSG00000023973	Cnpy3	ENSMUST00000129200	ENSMUSP00000120790	TRANSLATION	nonsense_mediated_decay	-	-	1	56	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000080316	Spaca6	ENSMUST00000179350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000155293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000226899	ENSMUSP00000154088	TRANSLATION	nonsense_mediated_decay	-	-	-	117	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000080316	Spaca6	ENSMUST00000178888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000137228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000133912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000080316	Spaca6	ENSMUST00000178408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000178056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000139969	ENSMUSP00000119658	TRANSLATION	nonsense_mediated_decay	start	-	1	188	3	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000080316	Spaca6	ENSMUST00000154301	ENSMUSP00000117377	TRANSLATION	nonsense_mediated_decay	start	-	3	80	0	0	0	0	0	0,3	-	-	-1	MINOR
ENSMUSG00000080316	Spaca6	ENSMUST00000012759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000080316	Spaca6	ENSMUST00000172097	ENSMUSP00000128732	TRANSLATION	protein_coding	-	CCDS49967.1	5	339	3	0	0.5	0	0	-3,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000080316	Spaca6	ENSMUST00000052338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000177859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080316	Spaca6	ENSMUST00000150302	ENSMUSP00000136307	TRANSLATION	protein_coding	stop	-	5	90	3	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000080316	Spaca6	ENSMUST00000228490	ENSMUSP00000154630	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000008668	Rps18	ENSMUST00000174745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008668	Rps18	ENSMUST00000174758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008668	Rps18	ENSMUST00000173323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008668	Rps18	ENSMUST00000174609	ENSMUSP00000138296	TRANSLATION	protein_coding	-	-	2	107	0	2.066	0	109.6	0	-4,-6	-	-	3.546	MINOR
ENSMUSG00000008668	Rps18	ENSMUST00000234380	ENSMUSP00000157085	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008668	Rps18	ENSMUST00000174620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008668	Rps18	ENSMUST00000174175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008668	Rps18	ENSMUST00000172799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008668	Rps18	ENSMUST00000172550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008668	Rps18	ENSMUST00000008812	ENSMUSP00000008812	TRANSLATION	protein_coding	-	CCDS37573.1	1	152	0	3.91	14.2	189	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000008668	Rps18	ENSMUST00000174662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090231	Cfb	ENSMUST00000154526	ENSMUSP00000120990	TRANSLATION	protein_coding	-	-	1	711	6	14.84	0.5	301.2	0	4,-1	-	-	7.176	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000153400	ENSMUSP00000116497	TRANSLATION	protein_coding	start	-	5	234	5	5.43	0	93.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000128767	ENSMUSP00000119977	TRANSLATION	protein_coding	-	-	1	761	10	17.16	1.5	359.9	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000090231	Cfb	ENSMUST00000176332	ENSMUSP00000135304	TRANSLATION	protein_coding	start	-	5	296	8	7.83	0	126.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000133127	ENSMUSP00000118360	TRANSLATION	nonsense_mediated_decay	start	-	5	81	1	1.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000176203	ENSMUSP00000135660	TRANSLATION	protein_coding	-	CCDS50079.1	1	713	6	14.84	0.5	301.2	0	4,-1	-	-	7.176	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000141295	ENSMUSP00000118945	TRANSLATION	protein_coding	start	-	5	259	6	6.78	0	108.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090231	Cfb	ENSMUST00000025229	ENSMUSP00000025229	TRANSLATION	protein_coding	-	CCDS28663.2	1	763	10	17.16	1.5	359.9	0	4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000002279	Lmf1	ENSMUST00000156868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002279	Lmf1	ENSMUST00000127280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002279	Lmf1	ENSMUST00000141606	ENSMUSP00000129263	TRANSLATION	protein_coding	-	-	2	512	0	0	0	424.9	2	-4,-7	-	-	2.82	MINOR
ENSMUSG00000002279	Lmf1	ENSMUST00000137201	ENSMUSP00000114651	TRANSLATION	nonsense_mediated_decay	-	-	1	64	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002279	Lmf1	ENSMUST00000142264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002279	Lmf1	ENSMUST00000128146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002279	Lmf1	ENSMUST00000116641	ENSMUSP00000112340	TRANSLATION	protein_coding	-	CCDS37502.2	5	574	0	0	0.5	477.9	2	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000002279	Lmf1	ENSMUST00000126164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002279	Lmf1	ENSMUST00000063344	ENSMUSP00000066682	TRANSLATION	protein_coding	-	-	5	574	0	0	0.5	472.4	2	-4,-7	-	-	5.67	ALTERNATIVE:2
ENSMUSG00000002279	Lmf1	ENSMUST00000154842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015597	Zfp318	ENSMUST00000123733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015597	Zfp318	ENSMUST00000113481	ENSMUSP00000109109	TRANSLATION	protein_coding	-	CCDS28827.2	5	2237	3	0	0.5	0	0	-4,-2	-	-	3	PRINCIPAL:4
ENSMUSG00000015597	Zfp318	ENSMUST00000138127	ENSMUSP00000116544	TRANSLATION	protein_coding	-	CCDS28826.2	5	1154	4	0	0.5	0	0	-4,-2	-	-	4	ALTERNATIVE:2
ENSMUSG00000015597	Zfp318	ENSMUST00000152472	ENSMUSP00000116132	TRANSLATION	nonsense_mediated_decay	start	-	5	54	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015597	Zfp318	ENSMUST00000136017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000143961	ENSMUSP00000116511	TRANSLATION	protein_coding	-	-	2	103	11	2.764	0	104.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000068039	Tcp1	ENSMUST00000147724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068039	Tcp1	ENSMUST00000151715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000129632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000133003	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000138709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000089024	ENSMUSP00000086418	TRANSLATION	protein_coding	-	CCDS70760.1	1	507	20	10	0.5	472.6	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000068039	Tcp1	ENSMUST00000233345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000233286	ENSMUSP00000156966	TRANSLATION	protein_coding	-	-	-	54	7	1.264	0	65.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000068039	Tcp1	ENSMUST00000134665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068039	Tcp1	ENSMUST00000151287	ENSMUSP00000116108	TRANSLATION	protein_coding	-	CCDS28397.1	1	556	24	11.5	17	512.9	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000068039	Tcp1	ENSMUST00000137289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003665	Has1	ENSMUST00000232410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003665	Has1	ENSMUST00000003762	ENSMUSP00000003762	TRANSLATION	protein_coding	-	CCDS37459.1	1	583	14	0	5.1	38.4	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000040490	Lrfn2	ENSMUST00000046254	ENSMUSP00000047573	TRANSLATION	protein_coding	-	CCDS28871.1	1	788	0	0.36	3.9	167.8	0	2,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201583	ENSMUSP00000144097	TRANSLATION	protein_coding	-	-	5	182	0	1.36	0	58.3	0	-3,-4	-	-	3.09	MINOR
ENSMUSG00000036473	Tbc1d24	ENSMUST00000171189	ENSMUSP00000128001	TRANSLATION	protein_coding	-	CCDS28477.1	1	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201301	ENSMUSP00000143949	TRANSLATION	protein_coding	-	CCDS50012.1	5	561	0	2.64	1.5	192.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036473	Tbc1d24	ENSMUST00000202925	ENSMUSP00000144575	TRANSLATION	protein_coding	-	CCDS28477.1	5	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000167791	ENSMUSP00000127005	TRANSLATION	protein_coding	-	CCDS50012.1	1	561	0	2.64	1.5	192.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036473	Tbc1d24	ENSMUST00000202018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036473	Tbc1d24	ENSMUST00000168410	ENSMUSP00000128868	TRANSLATION	protein_coding	-	CCDS28477.1	1	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201359	ENSMUSP00000144026	TRANSLATION	nonsense_mediated_decay	-	-	1	325	0	0.48	0	105.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201089	ENSMUSP00000144250	TRANSLATION	protein_coding	-	CCDS28477.1	1	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000097376	ENSMUSP00000094989	TRANSLATION	protein_coding	-	CCDS50012.1	1	561	0	2.64	1.5	192.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036473	Tbc1d24	ENSMUST00000168378	ENSMUSP00000126107	TRANSLATION	protein_coding	-	CCDS28477.1	1	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201960	ENSMUSP00000144208	TRANSLATION	protein_coding	-	CCDS28477.1	5	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000040474	ENSMUSP00000036458	TRANSLATION	protein_coding	-	CCDS28477.1	1	555	0	2.64	1.5	192.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000036473	Tbc1d24	ENSMUST00000201805	ENSMUSP00000143883	TRANSLATION	protein_coding	-	CCDS50012.1	1	561	0	2.64	1.5	192.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000073407	Gm6034	ENSMUST00000097331	ENSMUSP00000094943	TRANSLATION	protein_coding	-	CCDS50100.1	1	117	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000040852	Plekhh2	ENSMUST00000234573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040852	Plekhh2	ENSMUST00000235090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040852	Plekhh2	ENSMUST00000047206	ENSMUSP00000039628	TRANSLATION	protein_coding	-	CCDS28999.1	1	1491	0	7.145	0.5	230.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094083	Gm1604b	ENSMUST00000097422	ENSMUSP00000095033	TRANSLATION	protein_coding	-	CCDS28375.1	1	118	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000023949	Tcte1	ENSMUST00000233588	ENSMUSP00000156920	TRANSLATION	protein_coding	-	CCDS37629.1	-	498	0	1.4	1.5	78.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023949	Tcte1	ENSMUST00000113547	ENSMUSP00000109175	TRANSLATION	protein_coding	-	CCDS37629.1	5	498	0	1.4	1.5	78.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044526	Znrf4	ENSMUST00000052211	ENSMUSP00000059715	TRANSLATION	protein_coding	-	CCDS28906.1	-	327	8	0	1.5	42.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024401	Tnf	ENSMUST00000025263	ENSMUSP00000025263	TRANSLATION	protein_coding	-	CCDS28691.1	1	235	0	1.6	5.1	130.8	1	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000024401	Tnf	ENSMUST00000167924	ENSMUSP00000126122	TRANSLATION	protein_coding	-	CCDS70801.1	1	219	0	1.1	0.5	130.8	1	-4,-6	-	-	10.128	MINOR
ENSMUSG00000057899	Adgrf2	ENSMUST00000113614	ENSMUSP00000109244	TRANSLATION	protein_coding	-	CCDS28792.2	1	644	0	0	0.5	120.5	7	0,-4	-	-	5.454	MINOR
ENSMUSG00000057899	Adgrf2	ENSMUST00000239223	ENSMUSP00000159259	TRANSLATION	protein_coding	-	-	-	673	0	0.55	0.5	129.6	7	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000023886	Smoc2	ENSMUST00000233540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023886	Smoc2	ENSMUST00000232936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023886	Smoc2	ENSMUST00000233526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023886	Smoc2	ENSMUST00000024660	ENSMUSP00000024660	TRANSLATION	protein_coding	-	CCDS37442.1	1	447	8	3.05	6.3	309.1	0	3,-1	-	-	20	PRINCIPAL:2
ENSMUSG00000023886	Smoc2	ENSMUST00000233344	ENSMUSP00000156572	TRANSLATION	protein_coding	-	-	-	458	8	3.05	6.3	303.3	0	3,-1	-	-	19.652	ALTERNATIVE:1
ENSMUSG00000023886	Smoc2	ENSMUST00000232923	ENSMUSP00000156632	TRANSLATION	protein_coding	-	-	-	89	0	0.64	0	41	0	3,-1	-	-	1.182	MINOR
ENSMUSG00000023886	Smoc2	ENSMUST00000233686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044957	Pp2d1	ENSMUST00000056198	ENSMUSP00000056682	TRANSLATION	protein_coding	-	CCDS37653.1	1	620	3	0.32	0.5	75.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000007039	Ddah2	ENSMUST00000174493	ENSMUSP00000134072	TRANSLATION	protein_coding	-	CCDS57070.1	1	244	0	4.55	0.5	0	0	-4,-5	-	-	3.474	MINOR
ENSMUSG00000007039	Ddah2	ENSMUST00000007255	ENSMUSP00000007255	TRANSLATION	protein_coding	-	CCDS50082.1	1	285	0	5.812	8.8	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000007039	Ddah2	ENSMUST00000173520	ENSMUSP00000134595	TRANSLATION	protein_coding	stop	-	3	157	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007039	Ddah2	ENSMUST00000173562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004945	Tmem242	ENSMUST00000188282	ENSMUSP00000139629	TRANSLATION	protein_coding	-	-	1	118	0	0	0	153.7	4	-4,-5	-	-	4.386	MINOR
ENSMUSG00000004945	Tmem242	ENSMUST00000005053	ENSMUSP00000005053	TRANSLATION	protein_coding	-	CCDS49930.1	1	140	0	0	7.8	180.6	4	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000004945	Tmem242	ENSMUST00000185896	ENSMUSP00000139712	TRANSLATION	protein_coding	-	-	1	139	0	0	0	153.1	4	-4,-5	-	-	4.35	MINOR
ENSMUSG00000046991	Wdr27	ENSMUST00000232147	ENSMUSP00000155992	TRANSLATION	nonsense_mediated_decay	-	-	-	825	0	10.84	0.5	71.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046991	Wdr27	ENSMUST00000238668	ENSMUSP00000158649	TRANSLATION	protein_coding	-	-	-	825	0	10.84	0.5	71.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046991	Wdr27	ENSMUST00000228233	ENSMUSP00000158684	TRANSLATION	protein_coding	start	-	-	272	0	3.62	0	32.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046991	Wdr27	ENSMUST00000170386	ENSMUSP00000126736	TRANSLATION	protein_coding	-	CCDS37443.1	5	780	0	8.38	0.5	50.8	0	-4,-5	-	-	5.358	MINOR
ENSMUSG00000046991	Wdr27	ENSMUST00000228869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046991	Wdr27	ENSMUST00000228330	ENSMUSP00000153717	TRANSLATION	protein_coding	-	CCDS37443.1	-	780	0	8.38	0.5	50.8	0	-4,-5	-	-	5.358	MINOR
ENSMUSG00000046991	Wdr27	ENSMUST00000227673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046991	Wdr27	ENSMUST00000228221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036368	Rmdn2	ENSMUST00000040368	ENSMUSP00000044543	TRANSLATION	protein_coding	-	CCDS28985.1	1	410	0	0	3.9	0	0	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000036368	Rmdn2	ENSMUST00000226004	ENSMUSP00000152929	TRANSLATION	protein_coding	start	-	-	57	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036368	Rmdn2	ENSMUST00000223555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036368	Rmdn2	ENSMUST00000225357	ENSMUSP00000153443	TRANSLATION	protein_coding	-	CCDS28985.1	-	410	0	0	3.9	0	0	-4,-7	-	-	1	PRINCIPAL:1
ENSMUSG00000036368	Rmdn2	ENSMUST00000224097	ENSMUSP00000153145	TRANSLATION	protein_coding	start	-	-	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036368	Rmdn2	ENSMUST00000223924	ENSMUSP00000153264	TRANSLATION	protein_coding	stop	-	-	98	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036368	Rmdn2	ENSMUST00000224618	ENSMUSP00000153203	TRANSLATION	protein_coding	stop	-	-	98	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036368	Rmdn2	ENSMUST00000224014	ENSMUSP00000153400	TRANSLATION	protein_coding	stop	-	-	122	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036368	Rmdn2	ENSMUST00000086570	ENSMUSP00000083761	TRANSLATION	protein_coding	start/stop	-	1	309	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062591	Tubb4a	ENSMUST00000071135	ENSMUSP00000071135	TRANSLATION	protein_coding	-	CCDS28925.1	1	444	19	3.5	9.5	371.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033450	Tagap	ENSMUST00000036370	ENSMUSP00000047431	TRANSLATION	protein_coding	-	CCDS28379.1	1	714	0	3.8	1.5	118.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033450	Tagap	ENSMUST00000226153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023883	Phf10	ENSMUST00000172054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023883	Phf10	ENSMUST00000171526	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023883	Phf10	ENSMUST00000167805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023883	Phf10	ENSMUST00000024657	ENSMUSP00000024657	TRANSLATION	protein_coding	-	CCDS28407.2	1	497	16	2.1	2.9	34.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023883	Phf10	ENSMUST00000168938	ENSMUSP00000125917	TRANSLATION	nonsense_mediated_decay	-	-	5	234	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000014911	ENSMUSP00000014911	TRANSLATION	protein_coding	-	CCDS37454.2	1	316	0	7.26	1.5	217.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014767	Tbp	ENSMUST00000149518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014767	Tbp	ENSMUST00000119879	ENSMUSP00000114007	TRANSLATION	protein_coding	stop	-	5	250	0	5.18	0	110.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000147081	ENSMUSP00000120484	TRANSLATION	protein_coding	stop	-	3	180	0	3.18	0	33.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000155051	ENSMUSP00000117551	TRANSLATION	protein_coding	stop	-	2	76	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000118001	ENSMUSP00000113999	TRANSLATION	protein_coding	-	-	1	260	0	5.93	0	91	0	-4,-5	-	-	3.342	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000143924	ENSMUSP00000122696	TRANSLATION	protein_coding	stop	-	5	148	0	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000162505	ENSMUSP00000124317	TRANSLATION	protein_coding	-	CCDS37454.2	1	316	0	7.26	1.5	217.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014767	Tbp	ENSMUST00000159197	ENSMUSP00000125691	TRANSLATION	protein_coding	stop	-	3	128	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014767	Tbp	ENSMUST00000117593	ENSMUSP00000112794	TRANSLATION	protein_coding	-	CCDS37454.2	1	316	0	7.26	1.5	217.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014767	Tbp	ENSMUST00000153480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014767	Tbp	ENSMUST00000232661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035435	Abca17	ENSMUST00000227002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035435	Abca17	ENSMUST00000234232	ENSMUSP00000157369	TRANSLATION	protein_coding	-	-	-	214	0	0	0	0	1	-4,-6	-	-	0	MINOR
ENSMUSG00000035435	Abca17	ENSMUST00000039324	ENSMUSP00000046218	TRANSLATION	protein_coding	-	CCDS37485.1	1	1733	15	6.44	0.5	333	11	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035435	Abca17	ENSMUST00000121226	ENSMUSP00000112538	TRANSLATION	protein_coding	-	CCDS37485.1	5	1733	15	6.44	0.5	333	11	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024402	Lta	ENSMUST00000025266	ENSMUSP00000025266	TRANSLATION	protein_coding	-	CCDS28692.1	1	202	0	1.6	6.3	116.9	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024042	Sik1	ENSMUST00000234142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024042	Sik1	ENSMUST00000024839	ENSMUSP00000024839	TRANSLATION	protein_coding	-	CCDS37552.1	1	779	18	6.79	1.5	253.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024042	Sik1	ENSMUST00000234867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024042	Sik1	ENSMUST00000234331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023980	Taf8	ENSMUST00000067103	ENSMUSP00000063201	TRANSLATION	protein_coding	-	CCDS37642.1	1	308	0	6.75	1.5	183.7	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000023980	Taf8	ENSMUST00000233274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023980	Taf8	ENSMUST00000233174	ENSMUSP00000156668	TRANSLATION	protein_coding	-	-	-	265	0	5.75	1.5	183.7	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000023980	Taf8	ENSMUST00000233675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023980	Taf8	ENSMUST00000233121	ENSMUSP00000156629	TRANSLATION	protein_coding	-	-	-	305	0	6.75	1.5	183.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000034116	Vav1	ENSMUST00000112870	ENSMUSP00000108491	TRANSLATION	protein_coding	-	CCDS50159.1	1	806	8	22.66	0.5	386.5	0	-4,-7	-	-	12.462	MINOR
ENSMUSG00000034116	Vav1	ENSMUST00000174878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034116	Vav1	ENSMUST00000169220	ENSMUSP00000126694	TRANSLATION	protein_coding	-	CCDS50158.1	1	821	8	22.91	0.5	405.9	0	-4,-7	-	-	14.124	MINOR
ENSMUSG00000034116	Vav1	ENSMUST00000005889	ENSMUSP00000005889	TRANSLATION	protein_coding	-	CCDS28931.1	1	845	8	23.66	4	445.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000034116	Vav1	ENSMUST00000008847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064147	Rab44	ENSMUST00000139931	ENSMUSP00000156945	TRANSLATION	protein_coding	start/stop	-	5	263	19	4.34	0	165.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064147	Rab44	ENSMUST00000132262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064147	Rab44	ENSMUST00000141239	ENSMUSP00000156939	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064147	Rab44	ENSMUST00000087942	ENSMUSP00000085253	TRANSLATION	protein_coding	-	CCDS37535.1	1	725	19	4.679	0.5	165.7	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000064147	Rab44	ENSMUST00000233860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064147	Rab44	ENSMUST00000233567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064147	Rab44	ENSMUST00000233717	ENSMUSP00000156400	TRANSLATION	protein_coding	-	-	-	973	19	4.679	0.5	165.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000040505	Abcg5	ENSMUST00000172439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040505	Abcg5	ENSMUST00000171544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040505	Abcg5	ENSMUST00000163375	ENSMUSP00000130783	TRANSLATION	protein_coding	-	-	5	480	8	9.33	0	139.4	5	-4,-7	-	-	8.592	MINOR
ENSMUSG00000040505	Abcg5	ENSMUST00000066175	ENSMUSP00000069495	TRANSLATION	protein_coding	-	CCDS29001.1	1	652	10	13.33	1.5	174	5	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000071311	Gpr31b	ENSMUST00000091648	ENSMUSP00000089237	TRANSLATION	protein_coding	-	CCDS37438.1	-	319	0	0.6	1.5	101.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036438	Calm2	ENSMUST00000150137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036438	Calm2	ENSMUST00000040440	ENSMUSP00000048857	TRANSLATION	protein_coding	-	CCDS37716.1	1	149	24	4.16	21.5	166.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036438	Calm2	ENSMUST00000234406	ENSMUSP00000157025	TRANSLATION	protein_coding	-	-	-	113	19	3.08	6.9	108.8	0	-4,-5	-	-	10.218	MINOR
ENSMUSG00000036438	Calm2	ENSMUST00000238271	ENSMUSP00000158587	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000036438	Calm2	ENSMUST00000143965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095104	Esp15	ENSMUST00000178929	ENSMUSP00000137292	TRANSLATION	protein_coding	-	CCDS57090.1	1	85	0	0	0.5	79.7	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000091859	Vmn2r100	ENSMUST00000231465	ENSMUSP00000156263	TRANSLATION	protein_coding	-	-	-	787	0	3.079	0	388.7	5	2,-3	-	-	10.71	MINOR
ENSMUSG00000091859	Vmn2r100	ENSMUST00000166081	ENSMUSP00000128350	TRANSLATION	protein_coding	-	CCDS49977.1	5	850	0	3.719	0.5	388.9	5	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000061665	Cd2ap	ENSMUST00000233626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061665	Cd2ap	ENSMUST00000233195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061665	Cd2ap	ENSMUST00000233350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061665	Cd2ap	ENSMUST00000024709	ENSMUSP00000024709	TRANSLATION	protein_coding	-	CCDS50114.1	1	637	0	7.67	5.1	165.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000061665	Cd2ap	ENSMUST00000233476	ENSMUSP00000156812	TRANSLATION	protein_coding	-	-	-	532	0	6.43	0	112.1	0	-4,-5	-	-	6.3	MINOR
ENSMUSG00000061665	Cd2ap	ENSMUST00000233123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024193	Phf1	ENSMUST00000237412	ENSMUSP00000158483	TRANSLATION	protein_coding	-	-	-	558	16	4	1.5	67.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000024193	Phf1	ENSMUST00000236269	ENSMUSP00000158196	TRANSLATION	nonsense_mediated_decay	-	-	-	72	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024193	Phf1	ENSMUST00000237750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024193	Phf1	ENSMUST00000236931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024193	Phf1	ENSMUST00000237189	ENSMUSP00000157624	TRANSLATION	protein_coding	-	-	-	599	16	4	0	67.8	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000024193	Phf1	ENSMUST00000236613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024193	Phf1	ENSMUST00000073724	ENSMUSP00000073402	TRANSLATION	protein_coding	-	CCDS37518.1	1	559	16	4	1.5	67.8	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000067201	H2-M9	ENSMUST00000087167	ENSMUSP00000084411	TRANSLATION	protein_coding	-	CCDS28724.1	1	342	0	3.904	0.5	205	2	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000067201	H2-M9	ENSMUST00000087165	ENSMUSP00000084409	TRANSLATION	protein_coding	-	-	1	244	0	2.64	0	146.1	2	1,-3	-	-	5.94	MINOR
ENSMUSG00000091971	Hspa1a	ENSMUST00000087328	ENSMUSP00000084586	TRANSLATION	protein_coding	-	CCDS50080.1	-	641	19	1	7.5	865.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000101361	Gm7358	ENSMUST00000186636	ENSMUSP00000140965	TRANSLATION	protein_coding	-	-	-	508	18	0.6	0.5	231.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000049618	Olfr103	ENSMUST00000058826	ENSMUSP00000094934	TRANSLATION	protein_coding	-	CCDS28746.1	-	313	0	0.36	1.5	176	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049618	Olfr103	ENSMUST00000173472	ENSMUSP00000134539	TRANSLATION	protein_coding	-	CCDS28746.1	3	313	0	0.36	1.5	176	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024056	Ndc80	ENSMUST00000232863	ENSMUSP00000156492	TRANSLATION	protein_coding	-	-	-	629	0	6.2	0	165.6	0	-4,-2	-	-	12	MINOR
ENSMUSG00000024056	Ndc80	ENSMUST00000233552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024056	Ndc80	ENSMUST00000233011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024056	Ndc80	ENSMUST00000024851	ENSMUSP00000024851	TRANSLATION	protein_coding	-	CCDS28959.1	1	642	0	6.2	6.3	165.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024056	Ndc80	ENSMUST00000233750	ENSMUSP00000156954	TRANSLATION	nonsense_mediated_decay	-	-	-	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024032	Tff1	ENSMUST00000235870	ENSMUSP00000157776	TRANSLATION	protein_coding	start	-	-	30	0	0.15	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000024032	Tff1	ENSMUST00000024831	ENSMUSP00000024831	TRANSLATION	protein_coding	-	CCDS37546.1	1	87	0	1.15	0.5	54.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000023984	Gm20517	ENSMUST00000130830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023984	Gm20517	ENSMUST00000132397	ENSMUSP00000117658	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	152	0	0	0	127.3	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000023984	Gm20517	ENSMUST00000146105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046329	Slc25a23	ENSMUST00000171128	ENSMUSP00000129354	TRANSLATION	nonsense_mediated_decay	start	-	3	47	4	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046329	Slc25a23	ENSMUST00000163442	ENSMUSP00000132962	TRANSLATION	protein_coding	start	-	3	179	11	1.36	0	70.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046329	Slc25a23	ENSMUST00000170015	ENSMUSP00000132169	TRANSLATION	protein_coding	start/stop	-	5	266	25	4.488	0	199.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000046329	Slc25a23	ENSMUST00000040280	ENSMUSP00000040198	TRANSLATION	protein_coding	-	CCDS28923.1	1	467	39	8.718	3.9	301.6	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000046329	Slc25a23	ENSMUST00000171528	ENSMUSP00000128348	TRANSLATION	protein_coding	start	-	3	176	16	2.59	0	110.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046329	Slc25a23	ENSMUST00000165187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059687	Olfr108	ENSMUST00000218675	ENSMUSP00000151360	TRANSLATION	protein_coding	-	CCDS28751.1	-	320	0	0.4524	0.5	181.3	8	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059687	Olfr108	ENSMUST00000078207	ENSMUSP00000077337	TRANSLATION	protein_coding	-	-	-	309	0	0.36	2.7	181.3	8	-4,-6	-	-	10.776	MINOR
ENSMUSG00000061613	U2af1	ENSMUST00000014684	ENSMUSP00000014684	TRANSLATION	protein_coding	-	CCDS28611.1	1	239	8	5.33	2.7	87.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000061613	U2af1	ENSMUST00000237323	ENSMUSP00000157853	TRANSLATION	nonsense_mediated_decay	-	-	-	75	4	2	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061613	U2af1	ENSMUST00000236293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061613	U2af1	ENSMUST00000235969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061613	U2af1	ENSMUST00000236260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061613	U2af1	ENSMUST00000236475	ENSMUSP00000157485	TRANSLATION	protein_coding	stop	-	-	126	4	2.75	0	57.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061613	U2af1	ENSMUST00000238046	ENSMUSP00000157991	TRANSLATION	nonsense_mediated_decay	-	-	-	45	4	1.25	0	33.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061613	U2af1	ENSMUST00000235600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061613	U2af1	ENSMUST00000166526	ENSMUSP00000129864	TRANSLATION	protein_coding	-	CCDS50055.1	2	239	8	5.25	2.7	87.1	0	-4,-5	-	-	17.838	ALTERNATIVE:2
ENSMUSG00000023832	Acat2	ENSMUST00000159697	ENSMUSP00000125066	TRANSLATION	protein_coding	-	-	1	365	20	8	0	456.1	0	-4,-6	-	-	13.932	MINOR
ENSMUSG00000023832	Acat2	ENSMUST00000159358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023832	Acat2	ENSMUST00000233792	ENSMUSP00000156406	TRANSLATION	protein_coding	-	-	-	349	20	8	0	395.1	0	-4,-7	-	-	10.272	MINOR
ENSMUSG00000023832	Acat2	ENSMUST00000007005	ENSMUSP00000007005	TRANSLATION	protein_coding	-	CCDS37437.1	1	397	20	9	10.8	490.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000059409	Ppp2r5d	ENSMUST00000233988	ENSMUSP00000156500	TRANSLATION	protein_coding	-	-	-	595	0	9.25	0.5	666.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000059409	Ppp2r5d	ENSMUST00000002839	ENSMUSP00000002839	TRANSLATION	protein_coding	-	CCDS28836.1	1	594	0	9.25	0.5	666.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000059409	Ppp2r5d	ENSMUST00000233757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059409	Ppp2r5d	ENSMUST00000233082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045036	Tmem232	ENSMUST00000062161	ENSMUSP00000055652	TRANSLATION	protein_coding	-	CCDS28940.1	1	675	0	0	0.5	769.2	1	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000045036	Tmem232	ENSMUST00000086722	ENSMUSP00000083927	TRANSLATION	protein_coding	-	CCDS28940.1	1	675	0	0	0.5	769.2	1	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000045036	Tmem232	ENSMUST00000233328	ENSMUSP00000156859	TRANSLATION	protein_coding	-	-	-	559	0	0	0.5	615.4	1	-4,-6	-	-	0	MINOR
ENSMUSG00000045036	Tmem232	ENSMUST00000233279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045036	Tmem232	ENSMUST00000233738	ENSMUSP00000156513	TRANSLATION	protein_coding	-	-	-	641	0	0	0.5	768.4	1	-4,-5	-	-	5.952	ALTERNATIVE:2
ENSMUSG00000045036	Tmem232	ENSMUST00000233493	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045036	Tmem232	ENSMUST00000233117	ENSMUSP00000156833	TRANSLATION	protein_coding	-	-	-	674	0	0	0.5	759.2	1	-4,-6	-	-	5.4	ALTERNATIVE:2
ENSMUSG00000067931	Zfp948	ENSMUST00000088787	ENSMUSP00000086166	TRANSLATION	protein_coding	-	CCDS28441.1	1	667	60	1.4	0.5	391.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024105	Themis3	ENSMUST00000024914	ENSMUSP00000024914	TRANSLATION	protein_coding	-	CCDS50170.1	1	569	0	0	1.5	320.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051390	Zbtb22	ENSMUST00000053429	ENSMUSP00000057466	TRANSLATION	protein_coding	-	CCDS28634.1	1	638	11	0.8	1.5	86.3	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000051390	Zbtb22	ENSMUST00000174463	ENSMUSP00000133345	TRANSLATION	protein_coding	stop	-	3	86	0	0.8	0	51	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000038002	Cramp1l	ENSMUST00000233169	ENSMUSP00000156431	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038002	Cramp1l	ENSMUST00000073337	ENSMUSP00000073060	TRANSLATION	protein_coding	-	CCDS50030.1	1	1285	3	0	1.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000038002	Cramp1l	ENSMUST00000233774	ENSMUSP00000156906	TRANSLATION	protein_coding	-	CCDS50030.1	-	1285	3	0	1.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000101307	Gm7356	ENSMUST00000189454	ENSMUSP00000156868	TRANSLATION	protein_coding	-	-	-	508	18	0.6	0.5	231.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023902	Zscan10	ENSMUST00000115509	ENSMUSP00000111171	TRANSLATION	protein_coding	-	CCDS79510.1	1	672	55	4	0.5	406.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000023902	Zscan10	ENSMUST00000095595	ENSMUSP00000093255	TRANSLATION	protein_coding	-	CCDS28451.1	1	782	55	4	0.5	406.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000023902	Zscan10	ENSMUST00000133749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023902	Zscan10	ENSMUST00000120967	ENSMUSP00000113386	TRANSLATION	protein_coding	-	CCDS70766.1	1	750	52	3.4	0.5	389.7	0	-4,-5	-	-	13.782	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000123866	ENSMUSP00000116748	TRANSLATION	protein_coding	stop	-	1	329	7	3.4	0	142.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000125912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023902	Zscan10	ENSMUST00000117606	ENSMUSP00000112460	TRANSLATION	protein_coding	-	-	1	149	0	2	0	104.2	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000122285	ENSMUSP00000112559	TRANSLATION	nonsense_mediated_decay	-	-	1	190	0	2	0	104.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000138487	ENSMUSP00000114341	TRANSLATION	protein_coding	stop	-	1	262	4	2.7	0	125.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000148062	ENSMUSP00000120876	TRANSLATION	protein_coding	stop	-	1	702	52	2.4	0.5	343.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000118369	ENSMUSP00000113757	TRANSLATION	protein_coding	-	-	1	190	0	2	0	104.2	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000023902	Zscan10	ENSMUST00000129227	ENSMUSP00000118987	TRANSLATION	protein_coding	stop	-	1	543	52	1.4	0.5	285.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024227	Pdzph1	ENSMUST00000177108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024227	Pdzph1	ENSMUST00000177360	ENSMUSP00000135180	TRANSLATION	protein_coding	-	-	5	198	2	1.6	0	36.8	0	-4,-5	-	-	1.044	MINOR
ENSMUSG00000024227	Pdzph1	ENSMUST00000025064	ENSMUSP00000025064	TRANSLATION	protein_coding	-	CCDS37673.1	1	1238	12	4.078	0.5	141	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000092413	Olfr115	ENSMUST00000221552	ENSMUSP00000152172	TRANSLATION	protein_coding	-	-	5	310	0	0	1.5	153.2	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000092413	Olfr115	ENSMUST00000223366	ENSMUSP00000152714	TRANSLATION	protein_coding	-	-	5	310	0	0	1.5	153.2	7	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000055602	Tcp10b	ENSMUST00000233962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055602	Tcp10b	ENSMUST00000116666	ENSMUSP00000112365	TRANSLATION	protein_coding	-	CCDS28401.1	1	438	0	5.26	1.5	272.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055602	Tcp10b	ENSMUST00000232990	ENSMUSP00000156627	TRANSLATION	protein_coding	-	-	-	391	0	4.26	1	206.2	0	-4,-5	-	-	6.024	MINOR
ENSMUSG00000055602	Tcp10b	ENSMUST00000233511	ENSMUSP00000156691	TRANSLATION	protein_coding	stop	-	-	107	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055602	Tcp10b	ENSMUST00000163227	ENSMUSP00000128059	TRANSLATION	protein_coding	stop	-	1	401	0	4.26	0	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055602	Tcp10b	ENSMUST00000086787	ENSMUSP00000083997	TRANSLATION	protein_coding	-	CCDS28401.1	1	438	0	5.26	1.5	272.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000092077	Olfr101	ENSMUST00000214376	ENSMUSP00000149603	TRANSLATION	protein_coding	-	CCDS28744.1	5	308	0	0.42	5.1	179.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000092077	Olfr101	ENSMUST00000215392	ENSMUSP00000149851	TRANSLATION	protein_coding	-	CCDS28744.1	5	308	0	0.42	5.1	179.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000092077	Olfr101	ENSMUST00000058046	ENSMUSP00000061042	TRANSLATION	protein_coding	-	CCDS28744.1	-	308	0	0.42	5.1	179.4	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000057801	Olfr135	ENSMUST00000213217	ENSMUSP00000150535	TRANSLATION	protein_coding	-	CCDS28778.1	5	312	0	0.3	5.1	168.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000057801	Olfr135	ENSMUST00000076245	ENSMUSP00000075595	TRANSLATION	protein_coding	-	CCDS28778.1	-	312	0	0.3	5.1	168.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095286	Olfr117	ENSMUST00000073636	ENSMUSP00000073320	TRANSLATION	protein_coding	-	CCDS28759.1	-	317	0	0.36	1.5	150.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095286	Olfr117	ENSMUST00000215414	ENSMUSP00000150204	TRANSLATION	protein_coding	-	CCDS28759.1	5	317	0	0.36	1.5	150.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095286	Olfr117	ENSMUST00000213638	ENSMUSP00000149006	TRANSLATION	protein_coding	-	CCDS28759.1	5	317	0	0.36	1.5	150.1	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000000579	Dynlt1c	ENSMUST00000149027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000579	Dynlt1c	ENSMUST00000092966	ENSMUSP00000090644	TRANSLATION	protein_coding	-	CCDS57042.1	1	113	0	3.33	21.5	110.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000579	Dynlt1c	ENSMUST00000124894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000579	Dynlt1c	ENSMUST00000138598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036533	Cdc42ep3	ENSMUST00000068958	ENSMUSP00000067217	TRANSLATION	protein_coding	-	CCDS28984.1	1	254	0	0	7.5	155.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000036533	Cdc42ep3	ENSMUST00000233363	ENSMUSP00000156957	TRANSLATION	protein_coding	stop	-	-	97	0	0	0	41	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045019	Acer1	ENSMUST00000056113	ENSMUSP00000062037	TRANSLATION	protein_coding	-	CCDS28919.1	1	273	0	0	1.5	187.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000007033	Hspa1l	ENSMUST00000007248	ENSMUSP00000007248	TRANSLATION	protein_coding	-	CCDS28670.1	1	641	19	1	8.8	865.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000036820	Amdhd2	ENSMUST00000234818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036820	Amdhd2	ENSMUST00000129523	ENSMUSP00000120520	TRANSLATION	protein_coding	-	-	3	453	10	6.53	0	42.1	0	-4,-2	-	-	15.264	MINOR
ENSMUSG00000036820	Amdhd2	ENSMUST00000131766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036820	Amdhd2	ENSMUST00000130520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036820	Amdhd2	ENSMUST00000234886	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036820	Amdhd2	ENSMUST00000040735	ENSMUSP00000036141	TRANSLATION	protein_coding	-	CCDS28475.1	1	409	10	7.03	7.5	59.2	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000036820	Amdhd2	ENSMUST00000132944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036820	Amdhd2	ENSMUST00000138685	ENSMUSP00000122523	TRANSLATION	protein_coding	-	-	3	446	10	6.08	0	25.2	0	-4,-2	-	-	12.654	MINOR
ENSMUSG00000091631	Vmn2r95	ENSMUST00000232090	ENSMUSP00000156117	TRANSLATION	protein_coding	-	CCDS49973.1	-	845	0	3.16	0.5	372.9	5	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000091631	Vmn2r95	ENSMUST00000232464	ENSMUSP00000156383	TRANSLATION	protein_coding	-	-	-	773	0	2.74	0	370.9	5	3,-2	-	-	11.04	ALTERNATIVE:2
ENSMUSG00000091631	Vmn2r95	ENSMUST00000166327	ENSMUSP00000126106	TRANSLATION	protein_coding	-	-	5	549	0	2.68	0	167.8	0	3,-2	-	-	5.04	MINOR
ENSMUSG00000057443	Olfr138	ENSMUST00000173841	ENSMUSP00000133828	TRANSLATION	protein_coding	-	CCDS28779.1	2	312	0	0.36	2.7	157.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057443	Olfr138	ENSMUST00000172843	ENSMUSP00000133698	TRANSLATION	protein_coding	-	CCDS28779.1	2	312	0	0.36	2.7	157.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057443	Olfr138	ENSMUST00000071871	ENSMUSP00000071767	TRANSLATION	protein_coding	-	CCDS28779.1	-	312	0	0.36	2.7	157.5	5	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079722	Ttll2	ENSMUST00000115747	ENSMUSP00000111413	TRANSLATION	protein_coding	-	CCDS49941.1	1	540	18	0.48	0.5	269.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024140	Epas1	ENSMUST00000024954	ENSMUSP00000024954	TRANSLATION	protein_coding	-	CCDS37713.1	1	874	0	8.68	0.5	227.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024140	Epas1	ENSMUST00000234447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094928	1700122O11Rik	ENSMUST00000178823	ENSMUSP00000137519	TRANSLATION	protein_coding	-	CCDS57099.1	1	241	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000043807	Ly6g5b	ENSMUST00000172854	ENSMUSP00000138033	TRANSLATION	protein_coding	-	-	1	139	0	0	1	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000043807	Ly6g5b	ENSMUST00000062657	ENSMUSP00000052133	TRANSLATION	protein_coding	-	CCDS28683.1	1	194	0	0	1.5	0	0	3,-4	-	-	0	PRINCIPAL:2
ENSMUSG00000061207	Stk19	ENSMUST00000077477	ENSMUSP00000076686	TRANSLATION	protein_coding	-	CCDS28659.1	1	254	0	0	3.9	118.6	0	-4,0	-	-	7	PRINCIPAL:1
ENSMUSG00000061207	Stk19	ENSMUST00000159333	ENSMUSP00000125311	TRANSLATION	protein_coding	start	-	5	179	0	0	0	54.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061207	Stk19	ENSMUST00000161238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061207	Stk19	ENSMUST00000161885	ENSMUSP00000124667	TRANSLATION	nonsense_mediated_decay	start	-	3	107	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000061207	Stk19	ENSMUST00000160993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061207	Stk19	ENSMUST00000160193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061207	Stk19	ENSMUST00000162954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061207	Stk19	ENSMUST00000162055	ENSMUSP00000123988	TRANSLATION	nonsense_mediated_decay	start	-	5	64	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001229	Dpp9	ENSMUST00000233586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001229	Dpp9	ENSMUST00000038794	ENSMUSP00000046604	TRANSLATION	protein_coding	-	CCDS37663.1	1	862	5	8.615	1.5	543.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000001229	Dpp9	ENSMUST00000223616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046173	Pabpc6	ENSMUST00000057190	ENSMUSP00000050792	TRANSLATION	protein_coding	-	CCDS49946.1	-	643	0	0.6	1.5	384.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000090113	Nhlrc4	ENSMUST00000159540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090113	Nhlrc4	ENSMUST00000162078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090113	Nhlrc4	ENSMUST00000085027	ENSMUSP00000082102	TRANSLATION	protein_coding	-	CCDS28539.1	1	136	0	0.4	0.5	23	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000071042	Rasgrp3	ENSMUST00000234011	ENSMUSP00000156978	TRANSLATION	protein_coding	stop	-	-	69	0	1.682	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071042	Rasgrp3	ENSMUST00000095204	ENSMUSP00000092828	TRANSLATION	protein_coding	-	CCDS37695.1	1	691	8	11.43	5.1	234.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000071042	Rasgrp3	ENSMUST00000164192	ENSMUSP00000129393	TRANSLATION	protein_coding	-	CCDS37695.1	1	691	8	11.43	5.1	234.8	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000071042	Rasgrp3	ENSMUST00000234660	ENSMUSP00000157183	TRANSLATION	protein_coding	stop	-	-	56	0	1.55	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071042	Rasgrp3	ENSMUST00000235103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071042	Rasgrp3	ENSMUST00000234644	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071042	Rasgrp3	ENSMUST00000234640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095990	Zfp97	ENSMUST00000147630	ENSMUSP00000114301	TRANSLATION	protein_coding	-	CCDS49965.1	2	546	55	2.2	0.5	263.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000041119	Pde9a	ENSMUST00000155113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041119	Pde9a	ENSMUST00000130547	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041119	Pde9a	ENSMUST00000237363	ENSMUSP00000158458	TRANSLATION	protein_coding	-	-	-	383	13	10.92	0.5	272.9	0	-4,-6	-	-	8.124	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000154392	ENSMUSP00000117065	TRANSLATION	protein_coding	start	-	3	180	4	5.16	0	66.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000236367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041119	Pde9a	ENSMUST00000047168	ENSMUSP00000038005	TRANSLATION	protein_coding	-	CCDS28605.1	1	534	17	14.75	1.5	293.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041119	Pde9a	ENSMUST00000236675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041119	Pde9a	ENSMUST00000136384	ENSMUSP00000116724	TRANSLATION	protein_coding	-	-	2	387	13	10.92	0.5	293.1	0	-4,-6	-	-	9.336	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000235719	ENSMUSP00000158101	TRANSLATION	protein_coding	-	-	-	452	14	12.42	0	153.9	0	-4,-5	-	-	5.34	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000235639	ENSMUSP00000158058	TRANSLATION	protein_coding	start	-	-	495	13	12.933	0	293.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000237406	ENSMUSP00000158075	TRANSLATION	nonsense_mediated_decay	-	-	-	37	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000238006	ENSMUSP00000158100	TRANSLATION	protein_coding	start	-	-	115	2	3.41	0	55.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000238091	ENSMUSP00000157753	TRANSLATION	protein_coding	-	-	-	377	13	10.59	0	293.1	0	-4,-6	-	-	9.336	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000155395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041119	Pde9a	ENSMUST00000137927	ENSMUSP00000121126	TRANSLATION	nonsense_mediated_decay	-	-	5	37	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000134525	ENSMUSP00000121003	TRANSLATION	protein_coding	-	-	5	508	17	14	0	293.1	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000124902	ENSMUSP00000118869	TRANSLATION	nonsense_mediated_decay	-	-	5	102	4	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000236874	ENSMUSP00000158240	TRANSLATION	nonsense_mediated_decay	-	-	-	37	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000131417	ENSMUSP00000115188	TRANSLATION	nonsense_mediated_decay	-	-	5	63	4	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000143549	ENSMUSP00000117911	TRANSLATION	nonsense_mediated_decay	-	-	5	51	4	0.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000127929	ENSMUSP00000117611	TRANSLATION	protein_coding	-	CCDS28605.1	1	534	17	14.75	1.5	293.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041119	Pde9a	ENSMUST00000236077	ENSMUSP00000158208	TRANSLATION	nonsense_mediated_decay	-	-	-	68	3	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000235644	ENSMUSP00000157429	TRANSLATION	nonsense_mediated_decay	-	-	-	48	4	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000236454	ENSMUSP00000157420	TRANSLATION	protein_coding	-	-	-	387	13	10.92	0.5	293.1	0	-4,-6	-	-	9.336	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000141314	ENSMUSP00000117364	TRANSLATION	nonsense_mediated_decay	start	-	3	91	4	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000237698	ENSMUSP00000157717	TRANSLATION	nonsense_mediated_decay	start	-	-	30	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041119	Pde9a	ENSMUST00000154567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041119	Pde9a	ENSMUST00000236850	ENSMUSP00000158049	TRANSLATION	nonsense_mediated_decay	-	-	-	63	4	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000059740	ENSMUSP00000050693	TRANSLATION	protein_coding	start	-	1	212	0	0	0	118	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000154670	ENSMUSP00000123547	TRANSLATION	protein_coding	start	-	3	109	0	0	0	74.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000154272	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000146451	ENSMUSP00000115771	TRANSLATION	protein_coding	-	-	1	232	0	0	0.5	118	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000148482	ENSMUSP00000114151	TRANSLATION	protein_coding	-	-	1	232	0	0	0.5	118	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000156817	ENSMUSP00000114851	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000150056	ENSMUSP00000121142	TRANSLATION	protein_coding	stop	-	3	130	0	0	0	63.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000151274	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050705	2310061I04Rik	ENSMUST00000148721	ENSMUSP00000116278	TRANSLATION	protein_coding	-	CCDS50095.1	5	315	0	0	4.1	118	0	-4,0	-	-	7	PRINCIPAL:2
ENSMUSG00000010592	Dazl	ENSMUST00000233620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010592	Dazl	ENSMUST00000233248	ENSMUSP00000156777	TRANSLATION	protein_coding	-	-	-	261	0	3.5	1.2	51.7	0	-4,-5	-	-	11.295	MINOR
ENSMUSG00000010592	Dazl	ENSMUST00000232796	ENSMUSP00000156819	TRANSLATION	protein_coding	start	-	-	133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010592	Dazl	ENSMUST00000233756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010592	Dazl	ENSMUST00000232875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010592	Dazl	ENSMUST00000010736	ENSMUSP00000010736	TRANSLATION	protein_coding	-	CCDS37649.1	1	298	0	3.9	7.5	51.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000071230	Npw	ENSMUST00000095544	ENSMUSP00000093200	TRANSLATION	protein_coding	-	-	1	176	0	0	0.5	103	0	1,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000024125	Sbpl	ENSMUST00000235047	ENSMUSP00000157273	TRANSLATION	protein_coding	-	CCDS37481.1	-	232	0	1.2	0.5	49.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024125	Sbpl	ENSMUST00000024939	ENSMUSP00000024939	TRANSLATION	protein_coding	-	CCDS37481.1	1	232	0	1.2	0.5	49.5	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000039220	Ppp1r10	ENSMUST00000087211	ENSMUSP00000084461	TRANSLATION	protein_coding	-	CCDS50098.1	5	888	4	1.2	0.5	56.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039220	Ppp1r10	ENSMUST00000154856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039220	Ppp1r10	ENSMUST00000151375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039220	Ppp1r10	ENSMUST00000151664	ENSMUSP00000138094	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039220	Ppp1r10	ENSMUST00000087210	ENSMUSP00000084460	TRANSLATION	protein_coding	-	CCDS50098.1	1	888	4	1.2	0.5	56.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000039220	Ppp1r10	ENSMUST00000130124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039220	Ppp1r10	ENSMUST00000133641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067148	Polr1c	ENSMUST00000173232	ENSMUSP00000133597	TRANSLATION	nonsense_mediated_decay	-	-	5	103	0	2.1	0	38.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067148	Polr1c	ENSMUST00000152583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067148	Polr1c	ENSMUST00000174392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067148	Polr1c	ENSMUST00000124126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067148	Polr1c	ENSMUST00000173349	ENSMUSP00000133861	TRANSLATION	protein_coding	stop	-	3	170	0	3.85	0	73.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067148	Polr1c	ENSMUST00000087026	ENSMUSP00000084252	TRANSLATION	protein_coding	-	CCDS37632.1	1	346	0	8.625	10.5	187.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000067148	Polr1c	ENSMUST00000124655	ENSMUSP00000122026	TRANSLATION	protein_coding	-	-	5	260	0	7.025	0	145.3	0	-4,-5	-	-	6.27	MINOR
ENSMUSG00000067148	Polr1c	ENSMUST00000142706	ENSMUSP00000116998	TRANSLATION	protein_coding	stop	-	5	255	0	5.85	0	135	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024029	Tff3	ENSMUST00000024827	ENSMUSP00000024827	TRANSLATION	protein_coding	-	CCDS37544.1	1	81	0	1.3	1.5	56.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056399	Prss34	ENSMUST00000037453	ENSMUSP00000045672	TRANSLATION	protein_coding	-	CCDS28514.1	1	318	5	3.85	1.5	204.9	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000024069	Slc30a6	ENSMUST00000234515	ENSMUSP00000157293	TRANSLATION	nonsense_mediated_decay	-	-	-	147	0	0	0	56.2	11	-4,-1	-	-	-1	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000233180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024069	Slc30a6	ENSMUST00000233042	ENSMUSP00000156724	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	4	-4,-1	-	-	0	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000179074	ENSMUSP00000136503	TRANSLATION	protein_coding	-	CCDS57109.1	1	465	0	0	0.5	95.8	14	-4,-1	-	-	5.286	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000024870	ENSMUSP00000024870	TRANSLATION	protein_coding	-	CCDS37691.1	1	460	0	0	11.5	107.7	17	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000024069	Slc30a6	ENSMUST00000233799	ENSMUSP00000156452	TRANSLATION	protein_coding	stop	-	-	187	0	0	0	68.6	11	-4,-1	-	-	-1	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000232866	ENSMUSP00000156552	TRANSLATION	nonsense_mediated_decay	start	-	-	140	0	0	0	69.8	11	-4,-1	-	-	-1	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000235003	ENSMUSP00000157268	TRANSLATION	nonsense_mediated_decay	-	-	-	181	0	0	0	86.9	14	-4,-1	-	-	-1	MINOR
ENSMUSG00000024069	Slc30a6	ENSMUST00000233157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079580	Tmem217	ENSMUST00000234718	ENSMUSP00000157082	TRANSLATION	protein_coding	-	CCDS50050.1	-	189	0	0	1.5	197.8	6	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079580	Tmem217	ENSMUST00000234648	ENSMUSP00000157018	TRANSLATION	protein_coding	-	-	-	173	0	0	0	154.6	5	-4,-2	-	-	3.408	MINOR
ENSMUSG00000079580	Tmem217	ENSMUST00000234620	ENSMUSP00000157021	TRANSLATION	protein_coding	-	-	-	116	0	0	0	120.5	3	-2,-5	-	-	1.362	MINOR
ENSMUSG00000079580	Tmem217	ENSMUST00000114683	ENSMUSP00000110331	TRANSLATION	protein_coding	-	CCDS50050.1	1	189	0	0	1.5	197.8	6	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079580	Tmem217	ENSMUST00000234176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079580	Tmem217	ENSMUST00000235062	ENSMUSP00000157370	TRANSLATION	protein_coding	-	CCDS50050.1	-	189	0	0	1.5	197.8	6	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079580	Tmem217	ENSMUST00000168339	ENSMUSP00000132463	TRANSLATION	protein_coding	-	CCDS50050.1	1	189	0	0	1.5	197.8	6	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079580	Tmem217	ENSMUST00000234979	ENSMUSP00000156979	TRANSLATION	protein_coding	-	CCDS50050.1	-	189	0	0	1.5	197.8	6	-2,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000090588	Gm9573	ENSMUST00000164502	ENSMUSP00000130987	TRANSLATION	protein_coding	-	CCDS57077.1	5	1606	0	0	0.5	66.1	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000090588	Gm9573	ENSMUST00000173759	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047507	Baiap3	ENSMUST00000182903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047507	Baiap3	ENSMUST00000182978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047507	Baiap3	ENSMUST00000182825	ENSMUSP00000138254	TRANSLATION	protein_coding	-	-	5	1114	15	8.306	0	130.6	0	-4,-7	-	-	16.8	MINOR
ENSMUSG00000047507	Baiap3	ENSMUST00000182922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047507	Baiap3	ENSMUST00000182435	ENSMUSP00000138796	TRANSLATION	protein_coding	-	-	5	1122	15	8.906	0	130.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000047507	Baiap3	ENSMUST00000169109	ENSMUSP00000129854	TRANSLATION	protein_coding	-	-	5	1127	15	8.906	0	130.6	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000047507	Baiap3	ENSMUST00000182126	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047507	Baiap3	ENSMUST00000182056	ENSMUSP00000138188	TRANSLATION	protein_coding	-	CCDS50033.1	1	1150	15	8.906	1.5	130.6	0	-4,-7	-	-	18	PRINCIPAL:2
ENSMUSG00000047507	Baiap3	ENSMUST00000182696	ENSMUSP00000138454	TRANSLATION	protein_coding	start	-	5	90	1	0.8	0	22.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036430	Tbcc	ENSMUST00000040434	ENSMUSP00000048696	TRANSLATION	protein_coding	-	CCDS28843.1	-	341	0	1	1.5	234.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004865	Srpk1	ENSMUST00000232882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000233129	ENSMUSP00000156721	TRANSLATION	protein_coding	-	-	-	280	20	6.08	0	80.8	0	-4,-5	-	-	7.398	MINOR
ENSMUSG00000004865	Srpk1	ENSMUST00000145023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000136504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000233353	ENSMUSP00000156908	TRANSLATION	protein_coding	start/stop	-	-	345	15	4.08	0	34.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004865	Srpk1	ENSMUST00000145730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000233440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000232751	ENSMUSP00000156854	TRANSLATION	protein_coding	-	-	-	307	20	5.75	0	79.5	0	-4,-5	-	-	7.32	MINOR
ENSMUSG00000004865	Srpk1	ENSMUST00000126683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004865	Srpk1	ENSMUST00000114767	ENSMUSP00000110415	TRANSLATION	protein_coding	-	-	3	35	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000004865	Srpk1	ENSMUST00000130643	ENSMUSP00000116259	TRANSLATION	protein_coding	-	CCDS37531.1	1	648	21	10.63	0.5	146.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004865	Srpk1	ENSMUST00000004987	ENSMUSP00000004987	TRANSLATION	nonsense_mediated_decay	start	-	1	223	20	5.38	0	80.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004865	Srpk1	ENSMUST00000233794	ENSMUSP00000156541	TRANSLATION	protein_coding	stop	-	-	146	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041168	Lonp1	ENSMUST00000233732	ENSMUSP00000156840	TRANSLATION	nonsense_mediated_decay	-	-	-	141	0	0	0	0	0	-1,2	-	-	-1	MINOR
ENSMUSG00000041168	Lonp1	ENSMUST00000047226	ENSMUSP00000041814	TRANSLATION	protein_coding	-	CCDS28910.1	1	949	12	11.25	1.5	196.3	0	-1,2	-	-	18	PRINCIPAL:1
ENSMUSG00000071256	Zfp213	ENSMUST00000095606	ENSMUSP00000093266	TRANSLATION	protein_coding	-	CCDS28449.1	1	468	20	1.6	1.5	261.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024391	Apom	ENSMUST00000025249	ENSMUSP00000025249	TRANSLATION	protein_coding	-	CCDS28687.1	1	190	0	5.08	7.5	317.4	0	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000041057	Wdr43	ENSMUST00000234560	ENSMUSP00000157071	TRANSLATION	nonsense_mediated_decay	-	-	-	483	0	4.18	0	38.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041057	Wdr43	ENSMUST00000235094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000047086	ENSMUSP00000048337	TRANSLATION	protein_coding	-	CCDS50180.1	1	677	0	4.18	0.5	117.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041057	Wdr43	ENSMUST00000234424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041057	Wdr43	ENSMUST00000234933	ENSMUSP00000157149	TRANSLATION	nonsense_mediated_decay	start	-	-	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096717	Vmn2r98	ENSMUST00000170424	ENSMUSP00000131261	TRANSLATION	protein_coding	-	CCDS49976.1	5	857	0	3.1	1.5	377.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040048	Ndufb10	ENSMUST00000141324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040048	Ndufb10	ENSMUST00000045602	ENSMUSP00000043543	TRANSLATION	protein_coding	-	CCDS28494.1	1	176	0	4.33	1.5	162.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040048	Ndufb10	ENSMUST00000144285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040048	Ndufb10	ENSMUST00000135708	ENSMUSP00000120091	TRANSLATION	protein_coding	stop	-	2	149	0	2.75	0	109.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040048	Ndufb10	ENSMUST00000129451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040048	Ndufb10	ENSMUST00000147648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024208	Uqcc2	ENSMUST00000025045	ENSMUSP00000025045	TRANSLATION	protein_coding	-	CCDS28561.1	1	136	0	0	5.1	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000024208	Uqcc2	ENSMUST00000119227	ENSMUSP00000113777	TRANSLATION	protein_coding	-	-	3	127	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024208	Uqcc2	ENSMUST00000118613	ENSMUSP00000113747	TRANSLATION	protein_coding	-	-	3	97	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024208	Uqcc2	ENSMUST00000145148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091679	Vmn2r96	ENSMUST00000177244	ENSMUSP00000135095	TRANSLATION	protein_coding	-	-	5	856	4	4.55	0.5	382	6	1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000091679	Vmn2r96	ENSMUST00000231261	ENSMUSP00000156268	TRANSLATION	nonsense_mediated_decay	-	-	-	75	0	0.28	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000091679	Vmn2r96	ENSMUST00000231286	ENSMUSP00000156012	TRANSLATION	nonsense_mediated_decay	-	-	-	856	4	4.55	0.5	382	6	1,-4	-	-	-1	MINOR
ENSMUSG00000091679	Vmn2r96	ENSMUST00000165692	ENSMUSP00000131564	TRANSLATION	protein_coding	-	CCDS49974.1	5	664	4	2.38	0.5	334.8	6	-2,-4	-	-	8.83	MINOR
ENSMUSG00000094891	Olfr55	ENSMUST00000112168	ENSMUSP00000111680	TRANSLATION	protein_coding	-	CCDS50064.1	-	315	0	0.4	6.6	179.1	9	-2,-5	-	-	11.426	PRINCIPAL:2
ENSMUSG00000094891	Olfr55	ENSMUST00000214891	ENSMUSP00000153707	TRANSLATION	protein_coding	-	-	5	319	0	0.7	0	179.1	9	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000094891	Olfr55	ENSMUST00000214888	ENSMUSP00000153803	TRANSLATION	protein_coding	-	-	5	319	0	0.7	0	179.1	9	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000094891	Olfr55	ENSMUST00000216633	ENSMUSP00000150511	TRANSLATION	protein_coding	-	CCDS50064.1	5	315	0	0.4	6.6	179.1	9	-2,-5	-	-	11.426	PRINCIPAL:2
ENSMUSG00000015605	Srf	ENSMUST00000233797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015605	Srf	ENSMUST00000233767	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015605	Srf	ENSMUST00000233104	ENSMUSP00000156719	TRANSLATION	protein_coding	start	-	-	97	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015605	Srf	ENSMUST00000015749	ENSMUSP00000015749	TRANSLATION	protein_coding	-	CCDS28831.1	1	504	0	1.6	1.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024019	Cmtr1	ENSMUST00000235031	ENSMUSP00000157075	TRANSLATION	protein_coding	stop	-	-	369	25	7.73	0	140.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000235014	ENSMUSP00000157368	TRANSLATION	protein_coding	stop	-	-	225	2	3.48	0	48.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000129864	ENSMUSP00000134356	TRANSLATION	protein_coding	stop	-	2	68	4	2.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000172610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000128410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000234278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000234716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000234666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000024816	ENSMUSP00000024816	TRANSLATION	protein_coding	-	CCDS37539.1	1	837	27	13.13	1.5	181	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024019	Cmtr1	ENSMUST00000130052	ENSMUSP00000157162	TRANSLATION	protein_coding	stop	-	5	165	23	5.32	0	75.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000234911	ENSMUSP00000157171	TRANSLATION	protein_coding	stop	-	-	844	27	13.13	0	181	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000138939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024019	Cmtr1	ENSMUST00000127695	ENSMUSP00000157200	TRANSLATION	protein_coding	stop	-	3	72	9	2.9	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000235028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024019	Cmtr1	ENSMUST00000130423	ENSMUSP00000122706	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000234388	ENSMUSP00000157320	TRANSLATION	protein_coding	start/stop	-	-	147	18	5.23	0	30.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024019	Cmtr1	ENSMUST00000172516	ENSMUSP00000157341	TRANSLATION	nonsense_mediated_decay	start	-	3	37	0	0.66	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000233830	ENSMUSP00000156499	TRANSLATION	protein_coding	-	-	-	497	0	2.5	0	120.3	0	3,-2	-	-	1.122	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000232949	ENSMUSP00000156816	TRANSLATION	nonsense_mediated_decay	-	-	-	173	0	0.96	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000233388	ENSMUSP00000156935	TRANSLATION	nonsense_mediated_decay	-	-	-	173	0	0.96	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000233382	ENSMUSP00000156802	TRANSLATION	protein_coding	-	-	-	783	0	3.82	0	375.8	9	3,-2	-	-	9.42	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000233143	ENSMUSP00000156637	TRANSLATION	nonsense_mediated_decay	-	-	-	173	0	0.96	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000232850	ENSMUSP00000156389	TRANSLATION	protein_coding	-	-	-	819	0	4.46	0	376.9	9	3,-2	-	-	10.764	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000233572	ENSMUSP00000156635	TRANSLATION	protein_coding	-	-	-	533	0	2.98	0	122.9	0	3,-2	-	-	2.082	MINOR
ENSMUSG00000091805	Vmn2r108	ENSMUST00000167314	ENSMUSP00000130373	TRANSLATION	protein_coding	-	CCDS49986.1	5	855	0	4.94	1.5	381.5	9	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000071267	Zfp942	ENSMUST00000074295	ENSMUSP00000073907	TRANSLATION	protein_coding	-	CCDS57052.1	5	486	44	1.6	0.5	280.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000071267	Zfp942	ENSMUST00000126485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071267	Zfp942	ENSMUST00000091879	ENSMUSP00000089494	TRANSLATION	protein_coding	-	CCDS57052.1	1	486	44	1.6	0.5	280.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000019487	Trip10	ENSMUST00000224261	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019487	Trip10	ENSMUST00000224947	ENSMUSP00000153467	TRANSLATION	protein_coding	-	CCDS28930.1	-	547	0	12.23	1.5	92.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000019487	Trip10	ENSMUST00000224885	ENSMUSP00000153576	TRANSLATION	protein_coding	-	-	-	602	0	12.23	0.5	92.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019487	Trip10	ENSMUST00000224152	ENSMUSP00000153081	TRANSLATION	protein_coding	-	-	-	603	0	12.23	1.7	92.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019487	Trip10	ENSMUST00000225664	ENSMUSP00000153606	TRANSLATION	nonsense_mediated_decay	-	-	-	41	0	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019487	Trip10	ENSMUST00000224586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019487	Trip10	ENSMUST00000225523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019487	Trip10	ENSMUST00000019631	ENSMUSP00000019631	TRANSLATION	protein_coding	-	-	1	546	0	12.23	1.5	92.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000019487	Trip10	ENSMUST00000224904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024011	Pi16	ENSMUST00000155348	ENSMUSP00000116183	TRANSLATION	protein_coding	-	-	1	236	2	3.83	0.5	75.6	1	3,-2	-	-	14	ALTERNATIVE:2
ENSMUSG00000024011	Pi16	ENSMUST00000114701	ENSMUSP00000110349	TRANSLATION	protein_coding	-	CCDS28595.2	1	498	2	3.83	0.5	73.3	1	3,-2	-	-	13.82	PRINCIPAL:2
ENSMUSG00000024011	Pi16	ENSMUST00000114699	ENSMUSP00000110347	TRANSLATION	protein_coding	-	-	1	269	2	3.83	0	75.6	1	3,-2	-	-	14	ALTERNATIVE:2
ENSMUSG00000024011	Pi16	ENSMUST00000234618	ENSMUSP00000157231	TRANSLATION	protein_coding	start/stop	-	-	132	2	1.9	0	53.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024011	Pi16	ENSMUST00000234782	ENSMUSP00000156995	TRANSLATION	protein_coding	-	-	-	269	2	3.83	0	75.6	1	3,-2	-	-	14	ALTERNATIVE:2
ENSMUSG00000024011	Pi16	ENSMUST00000135754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000174130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000174033	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000174578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000173354	ENSMUSP00000133661	TRANSLATION	protein_coding	-	CCDS57067.1	1	414	27	8.5	2.7	273.6	0	-4,-6	-	-	17.334	MINOR
ENSMUSG00000039656	Rxrb	ENSMUST00000116612	ENSMUSP00000112311	TRANSLATION	protein_coding	-	CCDS57068.1	1	410	28	8.5	0.5	272.3	0	-4,-6	-	-	17.922	PRINCIPAL:2
ENSMUSG00000039656	Rxrb	ENSMUST00000174740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000173554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000044858	ENSMUSP00000036585	TRANSLATION	protein_coding	-	CCDS57066.1	1	524	27	8.5	0.5	273.6	0	-4,-2	-	-	17.334	MINOR
ENSMUSG00000039656	Rxrb	ENSMUST00000174645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039656	Rxrb	ENSMUST00000174299	ENSMUSP00000133775	TRANSLATION	protein_coding	-	-	1	520	28	8.5	1.5	272.3	0	-4,-2	-	-	17.922	ALTERNATIVE:2
ENSMUSG00000023919	Cenpq	ENSMUST00000087114	ENSMUSP00000084353	TRANSLATION	protein_coding	-	-	1	267	0	0	2.9	60.9	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000023919	Cenpq	ENSMUST00000239430	ENSMUSP00000159305	TRANSLATION	protein_coding	-	CCDS28789.1	-	269	0	0	2.9	60.9	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000023919	Cenpq	ENSMUST00000130890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037196	Pacrg	ENSMUST00000160599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037196	Pacrg	ENSMUST00000041463	ENSMUSP00000044376	TRANSLATION	protein_coding	-	CCDS28388.1	1	241	0	0	0.5	279.5	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000024114	Prss41	ENSMUST00000122936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024114	Prss41	ENSMUST00000024926	ENSMUSP00000024926	TRANSLATION	protein_coding	-	CCDS28466.1	1	322	11	2.972	1.5	207.3	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024114	Prss41	ENSMUST00000141788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024114	Prss41	ENSMUST00000151797	ENSMUSP00000122453	TRANSLATION	protein_coding	-	-	1	250	7	1.612	0	101.7	0	1,-3	-	-	6.588	MINOR
ENSMUSG00000038347	Tcte2	ENSMUST00000155166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038347	Tcte2	ENSMUST00000148430	ENSMUSP00000114746	TRANSLATION	protein_coding	-	CCDS49954.1	1	79	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000038347	Tcte2	ENSMUST00000142863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038347	Tcte2	ENSMUST00000130033	ENSMUSP00000116305	TRANSLATION	protein_coding	-	-	1	50	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038347	Tcte2	ENSMUST00000128194	ENSMUSP00000117173	TRANSLATION	nonsense_mediated_decay	-	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038347	Tcte2	ENSMUST00000053376	ENSMUSP00000059081	TRANSLATION	protein_coding	-	-	1	101	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038347	Tcte2	ENSMUST00000232858	ENSMUSP00000156694	TRANSLATION	protein_coding	stop	-	-	53	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038347	Tcte2	ENSMUST00000129681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038347	Tcte2	ENSMUST00000143162	ENSMUSP00000120730	TRANSLATION	protein_coding	-	-	1	120	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038347	Tcte2	ENSMUST00000127032	ENSMUSP00000118927	TRANSLATION	protein_coding	-	-	1	118	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000007041	Clic1	ENSMUST00000172599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007041	Clic1	ENSMUST00000007257	ENSMUSP00000007257	TRANSLATION	protein_coding	-	CCDS28675.1	1	241	8	5.5	10.8	70.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000023122	Sult1c2	ENSMUST00000023886	ENSMUSP00000023886	TRANSLATION	protein_coding	-	CCDS28883.1	1	296	20	7	5.1	313.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040966	Slc22a2	ENSMUST00000046959	ENSMUSP00000041186	TRANSLATION	protein_coding	-	CCDS28392.1	1	553	0	5.38	5.4	121.2	10	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000040966	Slc22a2	ENSMUST00000233066	ENSMUSP00000156710	TRANSLATION	protein_coding	-	-	-	544	0	5.246	0.5	121.2	10	-4,-7	-	-	11.73	MINOR
ENSMUSG00000033855	Ston1	ENSMUST00000132384	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033855	Ston1	ENSMUST00000137138	ENSMUSP00000118522	TRANSLATION	protein_coding	stop	-	2	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033855	Ston1	ENSMUST00000064035	ENSMUSP00000067027	TRANSLATION	protein_coding	-	CCDS50207.1	2	730	0	0.52	1.5	207.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033855	Ston1	ENSMUST00000163588	ENSMUSP00000131703	TRANSLATION	protein_coding	-	CCDS50207.1	1	730	0	0.52	1.5	207.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033855	Ston1	ENSMUST00000150023	ENSMUSP00000122928	TRANSLATION	protein_coding	-	CCDS50207.1	2	730	0	0.52	1.5	207.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033855	Ston1	ENSMUST00000153613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033855	Ston1	ENSMUST00000112216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037321	Tap1	ENSMUST00000170086	ENSMUSP00000128401	TRANSLATION	protein_coding	-	CCDS28643.1	1	724	13	12.29	1.5	332.9	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000037321	Tap1	ENSMUST00000166287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037321	Tap1	ENSMUST00000166582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037321	Tap1	ENSMUST00000171148	ENSMUSP00000130189	TRANSLATION	protein_coding	start/stop	-	5	196	10	4.49	0	111.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037321	Tap1	ENSMUST00000168351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037321	Tap1	ENSMUST00000041633	ENSMUSP00000039264	TRANSLATION	protein_coding	-	CCDS50072.1	1	696	13	11.54	0.5	302	2	2,-2	-	-	14.646	MINOR
ENSMUSG00000037321	Tap1	ENSMUST00000166853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039518	Cdsn	ENSMUST00000044804	ENSMUSP00000048596	TRANSLATION	protein_coding	-	CCDS28699.1	1	561	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000024340	Btnl2	ENSMUST00000178562	ENSMUSP00000137048	TRANSLATION	protein_coding	-	-	5	514	0	4.48	1.5	127.5	1	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024340	Btnl2	ENSMUST00000025198	ENSMUSP00000025198	TRANSLATION	protein_coding	-	CCDS37585.1	1	514	0	4.216	1.5	127.5	1	-4,-5	-	-	11.472	PRINCIPAL:2
ENSMUSG00000002768	Mea1	ENSMUST00000233385	ENSMUSP00000156624	TRANSLATION	protein_coding	stop	-	-	173	0	0	8.8	360.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002768	Mea1	ENSMUST00000002845	ENSMUSP00000002845	TRANSLATION	protein_coding	-	CCDS28835.1	1	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000002768	Mea1	ENSMUST00000233032	ENSMUSP00000156847	TRANSLATION	protein_coding	stop	-	-	131	0	0	0	240.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002768	Mea1	ENSMUST00000233644	ENSMUSP00000156526	TRANSLATION	protein_coding	stop	-	-	75	0	0	0	148.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002768	Mea1	ENSMUST00000232732	ENSMUSP00000156392	TRANSLATION	protein_coding	-	CCDS28835.1	-	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000002768	Mea1	ENSMUST00000232762	ENSMUSP00000156895	TRANSLATION	protein_coding	-	CCDS28835.1	-	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000002768	Mea1	ENSMUST00000233491	ENSMUSP00000156439	TRANSLATION	protein_coding	-	CCDS28835.1	-	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000002768	Mea1	ENSMUST00000233430	ENSMUSP00000156593	TRANSLATION	protein_coding	-	CCDS28835.1	-	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000002768	Mea1	ENSMUST00000233612	ENSMUSP00000156967	TRANSLATION	protein_coding	-	CCDS28835.1	-	174	0	0	8.8	363	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000091504	Vmn2r118	ENSMUST00000234082	ENSMUSP00000157270	TRANSLATION	nonsense_mediated_decay	-	-	-	225	0	1.2	0	60.3	0	2,-3	-	-	-1	MINOR
ENSMUSG00000091504	Vmn2r118	ENSMUST00000234172	ENSMUSP00000157283	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000091504	Vmn2r118	ENSMUST00000234385	ENSMUSP00000157205	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000091504	Vmn2r118	ENSMUST00000168440	ENSMUSP00000131128	TRANSLATION	protein_coding	-	CCDS50146.1	5	853	4	3.94	1.5	387.5	0	2,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000095325	Zfp870	ENSMUST00000178401	ENSMUSP00000136197	TRANSLATION	protein_coding	start	-	5	560	46	1.4	0.5	245.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095325	Zfp870	ENSMUST00000228410	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095325	Zfp870	ENSMUST00000235054	ENSMUSP00000157039	TRANSLATION	protein_coding	-	-	-	71	0	1	0	81.7	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000095325	Zfp870	ENSMUST00000228075	ENSMUSP00000154207	TRANSLATION	protein_coding	-	-	-	561	46	1.4	0.5	245.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000002660	Clpp	ENSMUST00000002735	ENSMUSP00000002735	TRANSLATION	protein_coding	-	CCDS28920.1	1	272	5	5.35	0.5	268.3	0	-4,-1	-	-	17	PRINCIPAL:1
ENSMUSG00000002660	Clpp	ENSMUST00000233845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000154232	ENSMUSP00000128835	TRANSLATION	nonsense_mediated_decay	-	-	5	146	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024335	Brd2	ENSMUST00000179687	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024335	Brd2	ENSMUST00000151986	ENSMUSP00000117359	TRANSLATION	protein_coding	stop	-	1	473	0	7.86	0	141	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024335	Brd2	ENSMUST00000237872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000025193	ENSMUSP00000025193	TRANSLATION	protein_coding	-	CCDS28641.1	1	798	0	7.86	1.5	238.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000024335	Brd2	ENSMUST00000095347	ENSMUSP00000092990	TRANSLATION	protein_coding	-	-	5	752	0	7.86	1	238.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000024335	Brd2	ENSMUST00000114242	ENSMUSP00000109880	TRANSLATION	protein_coding	-	CCDS28641.1	1	798	0	7.86	1.5	238.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000024335	Brd2	ENSMUST00000155286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000235313	ENSMUSP00000158176	TRANSLATION	nonsense_mediated_decay	start	-	-	132	0	2.266	0	26.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024335	Brd2	ENSMUST00000179722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024335	Brd2	ENSMUST00000177828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024335	Brd2	ENSMUST00000236090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000148143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000173032	ENSMUSP00000134608	TRANSLATION	protein_coding	start/stop	-	3	136	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024335	Brd2	ENSMUST00000142570	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000173204	ENSMUSP00000138431	TRANSLATION	nonsense_mediated_decay	start	-	3	64	0	2	0	26.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024335	Brd2	ENSMUST00000235347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000236781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024335	Brd2	ENSMUST00000237345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073424	Cyp4f15	ENSMUST00000168171	ENSMUSP00000129264	TRANSLATION	protein_coding	-	CCDS28620.1	1	534	30	8.5298	0.5	439.7	0	0,-3	-	-	17.292	PRINCIPAL:3
ENSMUSG00000073424	Cyp4f15	ENSMUST00000163907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073424	Cyp4f15	ENSMUST00000167789	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073424	Cyp4f15	ENSMUST00000008801	ENSMUSP00000008801	TRANSLATION	protein_coding	-	CCDS84293.1	1	527	30	8.51	0.5	451.5	0	0,-3	-	-	17.958	ALTERNATIVE:2
ENSMUSG00000024136	Dnase1l2	ENSMUST00000119932	ENSMUSP00000113508	TRANSLATION	protein_coding	-	CCDS37489.1	1	278	15	5.964	1.7	45.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024136	Dnase1l2	ENSMUST00000153858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024136	Dnase1l2	ENSMUST00000148820	ENSMUSP00000119453	TRANSLATION	nonsense_mediated_decay	-	-	3	76	1	1.1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024136	Dnase1l2	ENSMUST00000129401	ENSMUSP00000117477	TRANSLATION	nonsense_mediated_decay	start	-	3	40	4	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024136	Dnase1l2	ENSMUST00000154675	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024136	Dnase1l2	ENSMUST00000088506	ENSMUSP00000085862	TRANSLATION	protein_coding	-	CCDS37489.1	1	278	15	5.964	1.7	45.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024099	Ndufv2	ENSMUST00000138847	ENSMUSP00000137940	TRANSLATION	protein_coding	stop	-	2	59	3	1.75	0	91	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024099	Ndufv2	ENSMUST00000143987	ENSMUSP00000121557	TRANSLATION	protein_coding	-	CCDS37679.1	1	248	8	7	6.3	219.7	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000024099	Ndufv2	ENSMUST00000147484	ENSMUSP00000115317	TRANSLATION	protein_coding	stop	-	5	29	0	0.75	0	40.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024099	Ndufv2	ENSMUST00000024909	ENSMUSP00000024909	TRANSLATION	protein_coding	-	CCDS70836.1	1	152	8	4.5	0.5	179.4	0	-4,-5	-	-	10.584	MINOR
ENSMUSG00000007670	Khsrp	ENSMUST00000232759	ENSMUSP00000156771	TRANSLATION	protein_coding	start	-	-	238	0	2.75	0	99.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007670	Khsrp	ENSMUST00000233246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007670	Khsrp	ENSMUST00000232765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007670	Khsrp	ENSMUST00000233480	ENSMUSP00000156463	TRANSLATION	protein_coding	-	-	-	721	0	9.33	1	280	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000007670	Khsrp	ENSMUST00000007814	ENSMUSP00000007814	TRANSLATION	protein_coding	-	CCDS50157.1	1	748	0	9.33	1.5	280	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000035473	Galm	ENSMUST00000039205	ENSMUSP00000040580	TRANSLATION	protein_coding	-	CCDS28987.1	1	342	12	7	9.5	331.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035473	Galm	ENSMUST00000133955	ENSMUSP00000120018	TRANSLATION	protein_coding	start	-	5	184	7	3.45	0	132.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019432	Ddx39b	ENSMUST00000172549	ENSMUSP00000134178	TRANSLATION	protein_coding	-	CCDS28695.1	1	428	12	9.58	12	214	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019432	Ddx39b	ENSMUST00000174164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019432	Ddx39b	ENSMUST00000173731	ENSMUSP00000133428	TRANSLATION	protein_coding	-	CCDS28695.1	1	428	12	9.58	12	214	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019432	Ddx39b	ENSMUST00000174757	ENSMUSP00000133705	TRANSLATION	protein_coding	stop	-	3	148	8	3.75	0	119.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000019432	Ddx39b	ENSMUST00000068056	ENSMUSP00000070682	TRANSLATION	protein_coding	-	CCDS28695.1	1	428	12	9.58	12	214	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000019432	Ddx39b	ENSMUST00000174795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049620	Prss33	ENSMUST00000115444	ENSMUSP00000111104	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000049620	Prss33	ENSMUST00000164140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049620	Prss33	ENSMUST00000059906	ENSMUSP00000059491	TRANSLATION	protein_coding	-	CCDS37476.2	1	277	6	4.264	1.5	230.2	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000023979	Guca1b	ENSMUST00000145462	ENSMUSP00000126799	TRANSLATION	protein_coding	-	-	2	230	16	3.16	0.5	61.2	0	-4,-5	-	-	14.574	MINOR
ENSMUSG00000023979	Guca1b	ENSMUST00000024774	ENSMUSP00000024774	TRANSLATION	protein_coding	-	CCDS28847.1	1	201	17	4	12.8	74.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024088	4930583I09Rik	ENSMUST00000024896	ENSMUSP00000024896	TRANSLATION	protein_coding	-	CCDS84328.1	1	102	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000024088	4930583I09Rik	ENSMUST00000232860	-	NO_TRANSLATION	lincRNA
ENSMUSG00000079707	Tcte3	ENSMUST00000040746	ENSMUSP00000036704	TRANSLATION	protein_coding	-	CCDS28408.1	1	191	0	0	1.5	74.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079707	Tcte3	ENSMUST00000097398	ENSMUSP00000095010	TRANSLATION	protein_coding	-	CCDS28409.1	1	139	0	0	1.5	40	0	-4,-7	-	-	3.21	MINOR
ENSMUSG00000045053	Kcng3	ENSMUST00000051482	ENSMUSP00000054910	TRANSLATION	protein_coding	-	CCDS28996.1	1	433	0	1.1596	7.5	209.7	3	-4,-1	-	-	15	PRINCIPAL:2
ENSMUSG00000045053	Kcng3	ENSMUST00000234613	ENSMUSP00000157121	TRANSLATION	protein_coding	-	-	-	422	0	1.12	7.5	207.7	3	-4,-1	-	-	14.676	ALTERNATIVE:1
ENSMUSG00000023963	Cyp39a1	ENSMUST00000170988	ENSMUSP00000130073	TRANSLATION	protein_coding	-	CCDS28799.1	1	470	27	8.52	5.1	174.3	1	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000023963	Cyp39a1	ENSMUST00000233437	ENSMUSP00000156567	TRANSLATION	protein_coding	-	-	-	420	27	7.92	0.5	165.8	1	-2,-5	-	-	16.29	MINOR
ENSMUSG00000023963	Cyp39a1	ENSMUST00000233627	ENSMUSP00000156870	TRANSLATION	protein_coding	-	-	-	404	17	5.94	0.5	118.8	1	-2,-5	-	-	3.51	MINOR
ENSMUSG00000023963	Cyp39a1	ENSMUST00000233165	ENSMUSP00000156653	TRANSLATION	protein_coding	start	-	-	64	10	1.6	0	30.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000067882	Casp16	ENSMUST00000182769	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000067882	Casp16	ENSMUST00000088673	ENSMUSP00000086048	TRANSLATION	protein_coding	-	-	5	176	0	2.32	0	28.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000012296	Tjap1	ENSMUST00000225741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012296	Tjap1	ENSMUST00000224445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012296	Tjap1	ENSMUST00000225413	ENSMUSP00000153632	TRANSLATION	protein_coding	-	-	-	549	0	0	1.5	259.3	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000012296	Tjap1	ENSMUST00000012440	ENSMUSP00000012440	TRANSLATION	protein_coding	-	CCDS28824.1	1	539	0	0	1.5	259.3	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000012296	Tjap1	ENSMUST00000224090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012296	Tjap1	ENSMUST00000225288	ENSMUSP00000153561	TRANSLATION	protein_coding	stop	-	-	67	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000224230	ENSMUSP00000153219	TRANSLATION	protein_coding	stop	-	-	52	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000180283	ENSMUSP00000137220	TRANSLATION	protein_coding	-	CCDS28824.1	5	539	0	0	1.5	259.3	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000012296	Tjap1	ENSMUST00000224404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012296	Tjap1	ENSMUST00000224055	ENSMUSP00000153599	TRANSLATION	protein_coding	stop	-	-	61	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000225915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000012296	Tjap1	ENSMUST00000224696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012296	Tjap1	ENSMUST00000225359	ENSMUSP00000153626	TRANSLATION	protein_coding	stop	-	-	75	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000225943	ENSMUSP00000153022	TRANSLATION	protein_coding	stop	-	-	84	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000225080	ENSMUSP00000153327	TRANSLATION	protein_coding	-	CCDS28824.1	-	539	0	0	1.5	259.3	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000012296	Tjap1	ENSMUST00000224901	ENSMUSP00000153289	TRANSLATION	protein_coding	stop	-	-	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000012296	Tjap1	ENSMUST00000164342	ENSMUSP00000130710	TRANSLATION	protein_coding	-	CCDS28824.1	1	539	0	0	1.5	259.3	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000050410	Tcf19	ENSMUST00000159009	ENSMUSP00000124449	TRANSLATION	protein_coding	stop	-	2	201	0	0	0	45.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050410	Tcf19	ENSMUST00000160885	ENSMUSP00000125167	TRANSLATION	protein_coding	-	CCDS50089.1	1	263	0	0	1.5	45.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050410	Tcf19	ENSMUST00000161012	ENSMUSP00000125310	TRANSLATION	protein_coding	-	CCDS50089.1	1	263	0	0	1.5	45.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050410	Tcf19	ENSMUST00000162683	ENSMUSP00000125659	TRANSLATION	protein_coding	stop	-	1	147	0	0	0	45.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000067722	BC003965	ENSMUST00000232784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067722	BC003965	ENSMUST00000088307	ENSMUSP00000137122	TRANSLATION	protein_coding	-	CCDS57057.1	2	136	0	0	5.1	83.4	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000051611	Olfr112	ENSMUST00000173676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051611	Olfr112	ENSMUST00000208832	ENSMUSP00000146666	TRANSLATION	protein_coding	-	CCDS28756.1	1	320	0	0.6	0.5	152.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051611	Olfr112	ENSMUST00000174798	ENSMUSP00000133654	TRANSLATION	protein_coding	stop	-	1	300	0	0.3	0	145.7	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000051611	Olfr112	ENSMUST00000085548	ENSMUSP00000082684	TRANSLATION	protein_coding	-	CCDS28756.1	5	320	0	0.6	0.5	152.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000051611	Olfr112	ENSMUST00000213274	ENSMUSP00000150904	TRANSLATION	protein_coding	-	CCDS28756.1	5	320	0	0.6	0.5	152.7	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024219	Anks1	ENSMUST00000233298	ENSMUSP00000156742	TRANSLATION	protein_coding	stop	-	-	82	0	2.08	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000025058	ENSMUSP00000025058	TRANSLATION	protein_coding	-	CCDS70777.1	1	1189	0	13.97	1.5	349.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024219	Anks1	ENSMUST00000233058	ENSMUSP00000156525	TRANSLATION	protein_coding	stop	-	-	110	0	2.2	0	57.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000232769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024219	Anks1	ENSMUST00000139173	ENSMUSP00000156518	TRANSLATION	protein_coding	-	-	1	593	0	8.36	0.5	183.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000232872	ENSMUSP00000156946	TRANSLATION	protein_coding	start	-	-	433	0	7.71	0	159.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000233309	ENSMUSP00000156473	TRANSLATION	protein_coding	start	-	-	209	0	2.78	0	67.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000233866	ENSMUSP00000156529	TRANSLATION	protein_coding	start	-	-	44	0	0.36	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000233869	ENSMUSP00000156843	TRANSLATION	protein_coding	stop	-	-	142	0	2.88	0	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000232742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024219	Anks1	ENSMUST00000088027	ENSMUSP00000085344	TRANSLATION	protein_coding	-	CCDS70778.1	1	1168	0	13.67	1.5	318.5	0	-4,-5	-	-	9.564	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000233525	ENSMUSP00000156466	TRANSLATION	protein_coding	-	-	-	1129	0	13.67	0	318.5	0	-4,-5	-	-	9.564	MINOR
ENSMUSG00000024219	Anks1	ENSMUST00000114842	ENSMUSP00000110491	TRANSLATION	protein_coding	-	CCDS37525.1	1	1150	0	13.97	1.5	349.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000002658	Gtf2f1	ENSMUST00000002733	ENSMUSP00000002733	TRANSLATION	protein_coding	-	CCDS37667.1	1	508	0	10.55	1.5	655.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054640	Slc8a1	ENSMUST00000235015	ENSMUSP00000157030	TRANSLATION	protein_coding	-	-	-	940	20	5.81	0.5	597.5	6	2,-1	-	-	17.22	MINOR
ENSMUSG00000054640	Slc8a1	ENSMUST00000234131	ENSMUSP00000157278	TRANSLATION	protein_coding	-	CCDS50191.1	-	958	20	5.48	3.9	610.5	7	2,-1	-	-	18.657	MINOR
ENSMUSG00000054640	Slc8a1	ENSMUST00000086538	ENSMUSP00000083725	TRANSLATION	protein_coding	-	CCDS37706.1	5	970	20	5.81	7.6	610.5	7	2,-1	-	-	21	PRINCIPAL:2
ENSMUSG00000054640	Slc8a1	ENSMUST00000163123	ENSMUSP00000132809	TRANSLATION	protein_coding	-	CCDS37706.1	1	970	20	5.81	7.6	610.5	7	2,-1	-	-	21	PRINCIPAL:2
ENSMUSG00000054640	Slc8a1	ENSMUST00000234923	ENSMUSP00000157245	TRANSLATION	protein_coding	stop	-	-	599	14	0.8	0	485.4	4	2,-1	-	-	-1	MINOR
ENSMUSG00000054640	Slc8a1	ENSMUST00000163680	ENSMUSP00000126373	TRANSLATION	protein_coding	-	-	5	970	20	5.81	7.6	610.5	7	2,-1	-	-	21	ALTERNATIVE:1
ENSMUSG00000025731	Mettl26	ENSMUST00000026827	ENSMUSP00000026827	TRANSLATION	protein_coding	-	CCDS28536.1	1	204	18	0	7.5	306.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025731	Mettl26	ENSMUST00000169085	ENSMUSP00000125990	TRANSLATION	protein_coding	-	-	5	107	11	0	1.2	142.5	0	-4,-6	-	-	1.425	MINOR
ENSMUSG00000025731	Mettl26	ENSMUST00000110456	ENSMUSP00000106086	TRANSLATION	nonsense_mediated_decay	-	-	2	81	11	0	0	93.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025731	Mettl26	ENSMUST00000169308	ENSMUSP00000126198	TRANSLATION	protein_coding	-	-	2	201	18	0	0	276.1	0	-4,-7	-	-	10.2	MINOR
ENSMUSG00000025731	Mettl26	ENSMUST00000236426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007038	Neu1	ENSMUST00000173269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007038	Neu1	ENSMUST00000174715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007038	Neu1	ENSMUST00000007253	ENSMUSP00000007253	TRANSLATION	protein_coding	-	CCDS28668.1	1	409	4	2.42	1.5	169.2	0	-1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000015659	Serac1	ENSMUST00000144284	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015659	Serac1	ENSMUST00000024570	ENSMUSP00000024570	TRANSLATION	protein_coding	-	CCDS28366.1	1	624	6	0	1.5	0	2	-4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000015659	Serac1	ENSMUST00000139542	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015659	Serac1	ENSMUST00000153325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015659	Serac1	ENSMUST00000097432	ENSMUSP00000095043	TRANSLATION	protein_coding	-	CCDS49933.1	1	654	6	0	2.7	0	2	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000034509	Mad2l1bp	ENSMUST00000171172	ENSMUSP00000125915	TRANSLATION	protein_coding	-	CCDS28821.1	1	276	0	2	1.5	537.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036398	Ppp1r11	ENSMUST00000173540	ENSMUSP00000134322	TRANSLATION	protein_coding	stop	-	2	120	0	0	0	75	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036398	Ppp1r11	ENSMUST00000174711	ENSMUSP00000134685	TRANSLATION	protein_coding	-	CCDS28729.1	3	131	0	0	0.5	75	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000036398	Ppp1r11	ENSMUST00000040402	ENSMUSP00000047202	TRANSLATION	protein_coding	-	CCDS28729.1	1	131	0	0	0.5	75	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024142	Mlst8	ENSMUST00000070888	ENSMUSP00000065004	TRANSLATION	protein_coding	-	CCDS28484.1	1	326	0	7.91	19.5	96.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024142	Mlst8	ENSMUST00000234543	ENSMUSP00000157225	TRANSLATION	protein_coding	-	-	-	260	0	6.08	2.9	83.4	0	-4,-5	-	-	7.924	MINOR
ENSMUSG00000024142	Mlst8	ENSMUST00000234147	ENSMUSP00000157174	TRANSLATION	protein_coding	stop	-	-	238	0	5.08	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024142	Mlst8	ENSMUST00000234892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024142	Mlst8	ENSMUST00000234686	ENSMUSP00000157137	TRANSLATION	protein_coding	-	CCDS28484.1	-	326	0	7.91	19.5	96.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024142	Mlst8	ENSMUST00000234941	ENSMUSP00000157107	TRANSLATION	protein_coding	-	-	-	271	0	6.41	0	83.4	0	-4,-5	-	-	8.172	MINOR
ENSMUSG00000024142	Mlst8	ENSMUST00000234032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024142	Mlst8	ENSMUST00000234516	ENSMUSP00000157327	TRANSLATION	nonsense_mediated_decay	-	-	-	56	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024142	Mlst8	ENSMUST00000234335	ENSMUSP00000157301	TRANSLATION	protein_coding	-	CCDS28484.1	-	326	0	7.91	19.5	96.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024142	Mlst8	ENSMUST00000179163	ENSMUSP00000136287	TRANSLATION	protein_coding	-	CCDS28484.1	1	326	0	7.91	19.5	96.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000092243	Gm7030	ENSMUST00000046131	ENSMUSP00000040558	TRANSLATION	protein_coding	-	CCDS50101.1	5	285	0	2.8	0.5	316.5	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000092243	Gm7030	ENSMUST00000172968	ENSMUSP00000133748	TRANSLATION	protein_coding	-	CCDS50101.1	5	285	0	2.8	0.5	316.5	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000092243	Gm7030	ENSMUST00000173322	ENSMUSP00000133734	TRANSLATION	protein_coding	-	CCDS50101.1	1	285	0	2.8	0.5	316.5	0	3,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000036594	H2-Aa	ENSMUST00000174751	ENSMUSP00000133399	TRANSLATION	protein_coding	-	-	3	173	0	2.25	0	81.3	1	3,-2	-	-	4.002	MINOR
ENSMUSG00000036594	H2-Aa	ENSMUST00000165139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036594	H2-Aa	ENSMUST00000173944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036594	H2-Aa	ENSMUST00000040655	ENSMUSP00000046105	TRANSLATION	protein_coding	-	CCDS28645.1	1	256	0	3.25	4.1	206.7	1	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000024145	Pigf	ENSMUST00000024957	ENSMUSP00000024957	TRANSLATION	protein_coding	-	CCDS29011.1	1	219	0	0	8.8	159.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024064	Galnt14	ENSMUST00000146565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024064	Galnt14	ENSMUST00000233326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024064	Galnt14	ENSMUST00000232785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024064	Galnt14	ENSMUST00000024858	ENSMUSP00000024858	TRANSLATION	protein_coding	-	CCDS28965.1	1	550	23	11.37	7.5	179.6	1	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024064	Galnt14	ENSMUST00000112591	ENSMUSP00000108210	TRANSLATION	protein_coding	-	-	1	429	23	9.2	0.5	97.9	1	-1,-5	-	-	8.76	MINOR
ENSMUSG00000037577	Ephx3	ENSMUST00000087721	ENSMUSP00000085013	TRANSLATION	protein_coding	-	CCDS28615.1	1	424	4	5.08	0.5	64.6	2	-4,-7	-	-	16	PRINCIPAL:3
ENSMUSG00000037577	Ephx3	ENSMUST00000162117	ENSMUSP00000124600	TRANSLATION	protein_coding	-	CCDS84290.1	1	417	4	4.75	1.5	64.6	2	-4,-7	-	-	15.34	ALTERNATIVE:2
ENSMUSG00000003206	Ebi3	ENSMUST00000003274	ENSMUSP00000003274	TRANSLATION	protein_coding	-	CCDS28888.1	1	228	0	2.47	1.5	23.4	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000023978	Prph2	ENSMUST00000162469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023978	Prph2	ENSMUST00000024773	ENSMUSP00000024773	TRANSLATION	protein_coding	-	CCDS28844.1	1	346	0	0	7.5	96.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000023951	Vegfa	ENSMUST00000143985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023951	Vegfa	ENSMUST00000024747	ENSMUSP00000024747	TRANSLATION	protein_coding	-	CCDS70817.1	1	146	0	2.81	9.3	94.9	0	4,-1	-	-	7.038	MINOR
ENSMUSG00000023951	Vegfa	ENSMUST00000146149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023951	Vegfa	ENSMUST00000150327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023951	Vegfa	ENSMUST00000113520	ENSMUSP00000109148	TRANSLATION	protein_coding	-	-	5	208	0	3.84	3.6	192.3	0	4,-1	-	-	12.879	ALTERNATIVE:2
ENSMUSG00000023951	Vegfa	ENSMUST00000142321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023951	Vegfa	ENSMUST00000133605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023951	Vegfa	ENSMUST00000071648	ENSMUSP00000071575	TRANSLATION	protein_coding	-	-	1	368	0	3.81	2.7	193.3	0	-4,-6	-	-	12.555	ALTERNATIVE:2
ENSMUSG00000023951	Vegfa	ENSMUST00000113519	ENSMUSP00000109147	TRANSLATION	protein_coding	-	-	5	170	0	2.84	2.2	94.9	0	4,-1	-	-	4.533	MINOR
ENSMUSG00000023951	Vegfa	ENSMUST00000142351	ENSMUSP00000115883	TRANSLATION	protein_coding	-	-	1	392	0	3.84	2.7	192.9	0	-4,-6	-	-	12.591	PRINCIPAL:5
ENSMUSG00000002617	Zfp40	ENSMUST00000135840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002617	Zfp40	ENSMUST00000151447	ENSMUSP00000120756	TRANSLATION	protein_coding	stop	-	2	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002617	Zfp40	ENSMUST00000142999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002617	Zfp40	ENSMUST00000140313	ENSMUSP00000121359	TRANSLATION	protein_coding	-	-	1	728	75	0.9	0	334.8	0	-4,-5	-	-	10.998	MINOR
ENSMUSG00000002617	Zfp40	ENSMUST00000172177	ENSMUSP00000128758	TRANSLATION	protein_coding	-	CCDS37473.1	5	796	75	1.65	1.5	406	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000002617	Zfp40	ENSMUST00000037057	ENSMUSP00000039794	TRANSLATION	protein_coding	-	CCDS37473.1	1	796	75	1.65	1.5	406	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034345	Gtf2h5	ENSMUST00000039487	ENSMUSP00000040355	TRANSLATION	protein_coding	-	CCDS37423.1	1	71	0	1.5	19.5	93.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000034345	Gtf2h5	ENSMUST00000146035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034345	Gtf2h5	ENSMUST00000100955	ENSMUSP00000098515	TRANSLATION	protein_coding	-	CCDS37423.1	1	71	0	1.5	19.5	93.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024072	Yipf4	ENSMUST00000234448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024072	Yipf4	ENSMUST00000234432	ENSMUSP00000157350	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024072	Yipf4	ENSMUST00000234939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024072	Yipf4	ENSMUST00000235064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024072	Yipf4	ENSMUST00000234853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024072	Yipf4	ENSMUST00000024873	ENSMUSP00000024873	TRANSLATION	protein_coding	-	CCDS28971.1	1	246	0	0	5.2	38.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000024084	Qpct	ENSMUST00000233916	ENSMUSP00000156493	TRANSLATION	protein_coding	-	-	-	313	10	6	0.5	164.6	0	0,-3	-	-	16.002	MINOR
ENSMUSG00000024084	Qpct	ENSMUST00000040789	ENSMUSP00000038732	TRANSLATION	protein_coding	-	CCDS28983.1	1	362	10	7	0.5	164.6	0	-1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024084	Qpct	ENSMUST00000233899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061950	Ppp4r1	ENSMUST00000159646	ENSMUSP00000123796	TRANSLATION	nonsense_mediated_decay	start	-	3	148	0	0	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000162703	ENSMUSP00000124884	TRANSLATION	protein_coding	start	-	3	97	0	0.78	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000162788	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061950	Ppp4r1	ENSMUST00000073104	ENSMUSP00000072848	TRANSLATION	protein_coding	-	CCDS28941.2	1	951	0	4.94	0.5	79.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000061950	Ppp4r1	ENSMUST00000161324	ENSMUSP00000124956	TRANSLATION	protein_coding	stop	-	5	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000161127	ENSMUSP00000123862	TRANSLATION	protein_coding	stop	-	5	154	0	0.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000162408	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061950	Ppp4r1	ENSMUST00000097293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061950	Ppp4r1	ENSMUST00000162272	ENSMUSP00000124227	TRANSLATION	protein_coding	stop	-	5	189	0	0.76	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000161100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061950	Ppp4r1	ENSMUST00000160664	ENSMUSP00000124690	TRANSLATION	protein_coding	-	CCDS50167.1	1	934	0	4.94	0.5	79.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000061950	Ppp4r1	ENSMUST00000162109	ENSMUSP00000125220	TRANSLATION	nonsense_mediated_decay	-	-	1	376	0	1.86	0	49.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061950	Ppp4r1	ENSMUST00000182940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015474	Ppt2	ENSMUST00000168391	ENSMUSP00000132339	TRANSLATION	protein_coding	-	CCDS28652.1	5	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015474	Ppt2	ENSMUST00000170345	ENSMUSP00000127707	TRANSLATION	protein_coding	stop	-	3	203	4	5.83	0	27.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000015474	Ppt2	ENSMUST00000169969	ENSMUSP00000127726	TRANSLATION	protein_coding	start	-	3	247	6	6.66	0	62.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000015474	Ppt2	ENSMUST00000169067	ENSMUSP00000127372	TRANSLATION	protein_coding	-	CCDS28652.1	5	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015474	Ppt2	ENSMUST00000169287	ENSMUSP00000129421	TRANSLATION	protein_coding	stop	-	3	102	2	2.75	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000015474	Ppt2	ENSMUST00000064953	ENSMUSP00000068071	TRANSLATION	protein_coding	-	CCDS28652.1	1	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015474	Ppt2	ENSMUST00000171121	ENSMUSP00000127745	TRANSLATION	protein_coding	-	CCDS28652.1	5	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015474	Ppt2	ENSMUST00000167097	ENSMUSP00000125937	TRANSLATION	protein_coding	stop	-	5	236	5	6.91	0	62.9	0	2,-2	-	-	-1	MINOR
ENSMUSG00000015474	Ppt2	ENSMUST00000171376	ENSMUSP00000131243	TRANSLATION	protein_coding	-	CCDS28652.1	1	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000015474	Ppt2	ENSMUST00000166040	ENSMUSP00000132006	TRANSLATION	protein_coding	-	CCDS28652.1	3	302	6	8.41	3.9	85.5	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000000673	Haao	ENSMUST00000234312	ENSMUSP00000157081	TRANSLATION	nonsense_mediated_decay	-	-	-	64	2	1.698	0	85	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000673	Haao	ENSMUST00000000687	ENSMUSP00000000687	TRANSLATION	protein_coding	-	CCDS37709.1	1	286	3	8	7.6	253.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000000673	Haao	ENSMUST00000234863	ENSMUSP00000157168	TRANSLATION	nonsense_mediated_decay	-	-	-	69	0	0.75	0	26.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000673	Haao	ENSMUST00000234214	ENSMUSP00000157176	TRANSLATION	protein_coding	-	-	-	129	2	3.75	0	86.3	0	-4,-7	-	-	2.001	MINOR
ENSMUSG00000000673	Haao	ENSMUST00000234823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000673	Haao	ENSMUST00000234750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023828	Slc22a3	ENSMUST00000233535	ENSMUSP00000156407	TRANSLATION	nonsense_mediated_decay	-	-	-	363	0	2.38	0	76.5	6	-3,-2	-	-	-1	MINOR
ENSMUSG00000023828	Slc22a3	ENSMUST00000024595	ENSMUSP00000024595	TRANSLATION	protein_coding	-	CCDS28391.1	1	551	0	5.125	1.5	170.6	12	-3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000110218	Gm20219	ENSMUST00000209718	ENSMUSP00000147618	TRANSLATION	protein_coding	-	-	5	87	0	0	1.2	25.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000062638	Btnl1	ENSMUST00000080254	ENSMUSP00000079140	TRANSLATION	protein_coding	-	CCDS50075.1	5	509	0	3.206	0.5	88.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000062638	Btnl1	ENSMUST00000236230	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000235724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002625	Akap8l	ENSMUST00000237936	ENSMUSP00000158213	TRANSLATION	nonsense_mediated_decay	start	-	-	181	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002625	Akap8l	ENSMUST00000235265	ENSMUSP00000158056	TRANSLATION	protein_coding	stop	-	-	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002625	Akap8l	ENSMUST00000236503	ENSMUSP00000157684	TRANSLATION	protein_coding	-	-	-	607	8	0	0	246.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002625	Akap8l	ENSMUST00000237879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000236618	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002625	Akap8l	ENSMUST00000236105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000050214	ENSMUSP00000051389	TRANSLATION	protein_coding	-	CCDS50058.1	1	641	8	0	0.5	246.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002625	Akap8l	ENSMUST00000235614	ENSMUSP00000157768	TRANSLATION	nonsense_mediated_decay	start	-	-	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002625	Akap8l	ENSMUST00000235387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000236494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000236039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002625	Akap8l	ENSMUST00000236765	ENSMUSP00000158510	TRANSLATION	protein_coding	start/stop	-	-	262	4	0	0	98.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023966	Rsph9	ENSMUST00000024762	ENSMUSP00000024762	TRANSLATION	protein_coding	-	CCDS28820.1	1	276	0	0	5.1	26.4	0	-3,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000023966	Rsph9	ENSMUST00000152354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023966	Rsph9	ENSMUST00000148581	ENSMUSP00000116960	TRANSLATION	protein_coding	start	-	3	80	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040658	Dnph1	ENSMUST00000046497	ENSMUSP00000045283	TRANSLATION	protein_coding	-	CCDS28830.1	1	173	18	3.75	0.5	68.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000063011	Msln	ENSMUST00000237359	ENSMUSP00000158474	TRANSLATION	protein_coding	-	CCDS28526.1	-	625	0	1	1.5	1167.5	1	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000063011	Msln	ENSMUST00000075884	ENSMUSP00000075279	TRANSLATION	protein_coding	-	-	1	629	0	1	1.5	1160.6	1	1,-3	-	-	11.586	ALTERNATIVE:2
ENSMUSG00000063011	Msln	ENSMUST00000236053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063011	Msln	ENSMUST00000237012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063011	Msln	ENSMUST00000236137	ENSMUSP00000157558	TRANSLATION	protein_coding	-	-	-	629	0	1	1.5	1160.6	1	1,-3	-	-	11.586	ALTERNATIVE:2
ENSMUSG00000063011	Msln	ENSMUST00000235228	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063011	Msln	ENSMUST00000238120	ENSMUSP00000158357	TRANSLATION	protein_coding	-	CCDS28526.1	-	625	0	1	1.5	1167.5	1	2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000063011	Msln	ENSMUST00000235374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063011	Msln	ENSMUST00000238188	ENSMUSP00000157685	TRANSLATION	nonsense_mediated_decay	start	-	-	74	0	0	0	96.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061607	Mdc1	ENSMUST00000225192	ENSMUSP00000153197	TRANSLATION	protein_coding	start/stop	-	-	216	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061607	Mdc1	ENSMUST00000082337	ENSMUSP00000080949	TRANSLATION	protein_coding	-	CCDS37604.1	5	1708	0	7.4	0.5	74.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061607	Mdc1	ENSMUST00000174124	ENSMUSP00000133568	TRANSLATION	protein_coding	stop	-	2	109	0	1.8	0	42.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023827	Agpat4	ENSMUST00000164143	ENSMUSP00000128085	TRANSLATION	protein_coding	stop	-	5	194	0	0	0	54	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000023827	Agpat4	ENSMUST00000172259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023827	Agpat4	ENSMUST00000167905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023827	Agpat4	ENSMUST00000167792	ENSMUSP00000127477	TRANSLATION	protein_coding	stop	-	5	166	0	0	0	44.8	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000023827	Agpat4	ENSMUST00000170858	ENSMUSP00000127417	TRANSLATION	nonsense_mediated_decay	-	-	5	118	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000023827	Agpat4	ENSMUST00000024594	ENSMUSP00000024594	TRANSLATION	protein_coding	-	CCDS28389.1	1	378	0	0	8.8	146.9	5	-2,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000023911	Flywch2	ENSMUST00000127144	ENSMUSP00000121741	TRANSLATION	nonsense_mediated_decay	-	-	5	150	0	0	0	148.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023911	Flywch2	ENSMUST00000024704	ENSMUSP00000024704	TRANSLATION	protein_coding	-	CCDS28464.1	1	139	0	0	1.5	148.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000023911	Flywch2	ENSMUST00000122991	ENSMUSP00000118135	TRANSLATION	nonsense_mediated_decay	start	-	2	78	0	0	0	53.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000099104	Gm17087	ENSMUST00000184255	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000099104	Gm17087	ENSMUST00000184183	ENSMUSP00000139264	TRANSLATION	protein_coding	-	-	-	156	0	1	0	140.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024121	Atp6v0c	ENSMUST00000156061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024121	Atp6v0c	ENSMUST00000151061	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024121	Atp6v0c	ENSMUST00000024932	ENSMUSP00000024932	TRANSLATION	protein_coding	-	CCDS28476.1	1	155	0	2.6	11	131.9	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024121	Atp6v0c	ENSMUST00000148541	ENSMUSP00000121464	TRANSLATION	protein_coding	stop	-	3	150	0	2.6	0	129.3	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000024121	Atp6v0c	ENSMUST00000150647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024121	Atp6v0c	ENSMUST00000098862	ENSMUSP00000111059	TRANSLATION	protein_coding	-	CCDS28476.1	2	155	0	2.6	11	131.9	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000041354	Rgl2	ENSMUST00000173718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000174676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173266	ENSMUSP00000157027	TRANSLATION	protein_coding	stop	-	3	22	0	0.75	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000041354	Rgl2	ENSMUST00000234226	ENSMUSP00000157230	TRANSLATION	protein_coding	stop	-	-	63	0	1.75	0	0	0	-2,0	-	-	-1	MINOR
ENSMUSG00000041354	Rgl2	ENSMUST00000234070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173284	ENSMUSP00000134312	TRANSLATION	protein_coding	start/stop	-	5	314	0	4.98	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041354	Rgl2	ENSMUST00000047503	ENSMUSP00000041082	TRANSLATION	protein_coding	-	CCDS28635.1	1	778	0	14.56	0.5	254.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041354	Rgl2	ENSMUST00000172468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000174442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000173153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041354	Rgl2	ENSMUST00000174410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040312	Cchcr1	ENSMUST00000174827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040312	Cchcr1	ENSMUST00000164242	ENSMUSP00000132028	TRANSLATION	protein_coding	-	CCDS50090.1	1	770	0	0	0.5	1466.4	0	-4,-2	-	-	3.51	MINOR
ENSMUSG00000040312	Cchcr1	ENSMUST00000045956	ENSMUSP00000046612	TRANSLATION	protein_coding	-	CCDS50090.1	1	770	0	0	0.5	1466.4	0	-4,-2	-	-	3.51	MINOR
ENSMUSG00000040312	Cchcr1	ENSMUST00000172893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040312	Cchcr1	ENSMUST00000173582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040312	Cchcr1	ENSMUST00000173903	ENSMUSP00000133407	TRANSLATION	protein_coding	-	-	5	867	0	0	0.5	1507.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000040312	Cchcr1	ENSMUST00000173986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032624	Eml4	ENSMUST00000235121	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032624	Eml4	ENSMUST00000234460	ENSMUSP00000157143	TRANSLATION	protein_coding	-	-	-	941	0	16.23	0.5	197.8	0	-4,-6	-	-	11.34	ALTERNATIVE:2
ENSMUSG00000032624	Eml4	ENSMUST00000112363	ENSMUSP00000107982	TRANSLATION	protein_coding	-	CCDS50193.1	1	919	0	16.428	0.5	197.8	0	-4,-5	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000032624	Eml4	ENSMUST00000234584	ENSMUSP00000157195	TRANSLATION	protein_coding	-	-	-	977	0	16.428	0.5	197.8	0	-4,-5	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000032624	Eml4	ENSMUST00000096766	ENSMUSP00000094528	TRANSLATION	protein_coding	-	CCDS50192.1	1	988	0	16.56	0.5	197.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000032624	Eml4	ENSMUST00000049503	ENSMUSP00000041880	TRANSLATION	protein_coding	-	CCDS37708.1	1	876	0	16.428	0.5	197.8	0	-4,-5	-	-	11.736	PRINCIPAL:3
ENSMUSG00000056116	H2-T22	ENSMUST00000077960	ENSMUSP00000077111	TRANSLATION	protein_coding	-	CCDS37608.1	1	379	0	4.517	0.5	214.2	1	3,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000056116	H2-T22	ENSMUST00000058801	ENSMUSP00000056041	TRANSLATION	protein_coding	-	CCDS84308.1	1	344	0	4.037	0.5	212.7	0	3,-4	-	-	10.95	ALTERNATIVE:2
ENSMUSG00000056116	H2-T22	ENSMUST00000080015	ENSMUSP00000078927	TRANSLATION	protein_coding	-	CCDS37608.1	1	379	0	4.517	0.5	214.2	1	3,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000056116	H2-T22	ENSMUST00000172633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056116	H2-T22	ENSMUST00000173280	ENSMUSP00000134019	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0.105	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000019214	Chtf18	ENSMUST00000048054	ENSMUSP00000043896	TRANSLATION	protein_coding	-	CCDS28523.1	1	969	13	2.76	1.5	44.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000019214	Chtf18	ENSMUST00000170070	ENSMUSP00000131768	TRANSLATION	protein_coding	-	-	2	970	13	2.76	1.5	44.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000019214	Chtf18	ENSMUST00000237158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019214	Chtf18	ENSMUST00000170575	ENSMUSP00000131366	TRANSLATION	nonsense_mediated_decay	-	-	2	365	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019214	Chtf18	ENSMUST00000168060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019214	Chtf18	ENSMUST00000169767	ENSMUSP00000129694	TRANSLATION	protein_coding	start	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019214	Chtf18	ENSMUST00000168914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019214	Chtf18	ENSMUST00000167940	ENSMUSP00000131349	TRANSLATION	protein_coding	start	-	3	130	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000041754	Trem3	ENSMUST00000048065	ENSMUSP00000044478	TRANSLATION	protein_coding	-	CCDS28861.1	1	183	0	0.8	0.5	32.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000038781	Stap2	ENSMUST00000043785	ENSMUSP00000038130	TRANSLATION	protein_coding	-	CCDS28889.1	1	411	0	5.32	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000038781	Stap2	ENSMUST00000233977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038781	Stap2	ENSMUST00000233494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038781	Stap2	ENSMUST00000233528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116876	Gm49721	ENSMUST00000231550	ENSMUSP00000156290	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	259	11	5.75	1.5	204.8	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000024059	Clip4	ENSMUST00000230305	ENSMUSP00000154861	TRANSLATION	protein_coding	-	-	-	598	0	8.224	2.7	191.6	0	-4,-5	-	-	4.764	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000230747	ENSMUSP00000155452	TRANSLATION	nonsense_mediated_decay	-	-	-	494	0	4.76	0	109.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000229304	ENSMUSP00000155653	TRANSLATION	nonsense_mediated_decay	-	-	-	494	0	4.76	0	109.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000230700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024059	Clip4	ENSMUST00000229874	ENSMUSP00000154969	TRANSLATION	protein_coding	-	-	-	694	0	8.524	0.5	191.6	0	-4,-5	-	-	5.364	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000230160	ENSMUSP00000155323	TRANSLATION	protein_coding	start	-	-	288	0	4.614	0	138.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000231131	ENSMUSP00000155235	TRANSLATION	protein_coding	start	-	-	142	0	1.264	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000230290	ENSMUSP00000154993	TRANSLATION	protein_coding	start/stop	-	-	79	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000229288	ENSMUSP00000155637	TRANSLATION	protein_coding	stop	-	-	216	0	1.86	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000229903	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024059	Clip4	ENSMUST00000230749	ENSMUSP00000155844	TRANSLATION	nonsense_mediated_decay	-	-	-	401	0	4.76	0	109.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000231105	ENSMUSP00000154989	TRANSLATION	nonsense_mediated_decay	-	-	-	302	0	2.66	0	29.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000229952	ENSMUSP00000155140	TRANSLATION	protein_coding	-	-	-	551	0	7.624	0.5	183.6	0	-4,-5	-	-	3.084	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000024854	ENSMUSP00000024854	TRANSLATION	protein_coding	-	CCDS37687.1	1	704	0	9.524	2.9	268.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024059	Clip4	ENSMUST00000230333	ENSMUSP00000154878	TRANSLATION	protein_coding	-	-	-	598	0	8.224	2.7	191.6	0	-4,-5	-	-	4.764	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000230427	ENSMUSP00000155130	TRANSLATION	protein_coding	-	-	-	219	0	1.86	0	29.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024059	Clip4	ENSMUST00000229328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024059	Clip4	ENSMUST00000229014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024059	Clip4	ENSMUST00000230845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117148	Vmn1r229	ENSMUST00000076759	ENSMUSP00000076045	TRANSLATION	protein_coding	-	CCDS28428.1	-	306	0	0	1.5	95.2	7	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000117148	Vmn1r229	ENSMUST00000232810	ENSMUSP00000156686	TRANSLATION	protein_coding	-	CCDS28428.1	-	306	0	0	1.5	95.2	7	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000117148	Vmn1r229	ENSMUST00000233490	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117148	Vmn1r229	ENSMUST00000233712	ENSMUSP00000156596	TRANSLATION	protein_coding	-	CCDS28428.1	-	306	0	0	1.5	95.2	7	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000117148	Vmn1r229	ENSMUST00000232852	ENSMUSP00000156964	TRANSLATION	protein_coding	-	CCDS28428.1	-	306	0	0	1.5	95.2	7	-2,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000025732	Mcrip2	ENSMUST00000237000	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025732	Mcrip2	ENSMUST00000237876	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025732	Mcrip2	ENSMUST00000237080	ENSMUSP00000157703	TRANSLATION	nonsense_mediated_decay	-	-	-	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025732	Mcrip2	ENSMUST00000235578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025732	Mcrip2	ENSMUST00000235806	ENSMUSP00000158493	TRANSLATION	protein_coding	-	-	-	145	0	0	0	63.9	0	-4,-7	-	-	3.714	MINOR
ENSMUSG00000025732	Mcrip2	ENSMUST00000026828	ENSMUSP00000026828	TRANSLATION	protein_coding	-	CCDS28535.1	1	160	0	0	3.9	102	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000025732	Mcrip2	ENSMUST00000236479	ENSMUSP00000157779	TRANSLATION	protein_coding	-	-	-	146	0	0	0	63.6	0	-4,-7	-	-	3.696	MINOR
ENSMUSG00000042256	Ptchd4	ENSMUST00000232968	ENSMUSP00000156770	TRANSLATION	protein_coding	-	-	-	904	0	0.78	8.4	331.4	9	-4,0	-	-	15	ALTERNATIVE:1
ENSMUSG00000042256	Ptchd4	ENSMUST00000048691	ENSMUSP00000047640	TRANSLATION	protein_coding	-	CCDS50112.1	5	901	0	0.78	8.4	331.4	9	-3,0	-	-	15	PRINCIPAL:2
ENSMUSG00000042256	Ptchd4	ENSMUST00000233746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045761	Togaram2	ENSMUST00000153445	ENSMUSP00000122691	TRANSLATION	protein_coding	-	CCDS28961.2	5	1002	0	0	0.5	64.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045761	Togaram2	ENSMUST00000122869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045761	Togaram2	ENSMUST00000144479	ENSMUSP00000114359	TRANSLATION	protein_coding	start	-	1	1022	0	0	0	64.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045761	Togaram2	ENSMUST00000097284	ENSMUSP00000094886	TRANSLATION	protein_coding	-	CCDS28961.2	1	1002	0	0	0.5	64.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045761	Togaram2	ENSMUST00000129072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054666	Olfr63	ENSMUST00000067840	ENSMUSP00000067207	TRANSLATION	protein_coding	-	CCDS37563.1	-	316	0	0.2	2.9	171.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054666	Olfr63	ENSMUST00000217023	ENSMUSP00000150323	TRANSLATION	protein_coding	-	CCDS37563.1	5	316	0	0.2	2.9	171.7	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054666	Olfr63	ENSMUST00000215466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036918	Ttc7	ENSMUST00000153014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036918	Ttc7	ENSMUST00000144204	ENSMUSP00000122563	TRANSLATION	nonsense_mediated_decay	-	-	5	210	0	1.86	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036918	Ttc7	ENSMUST00000126497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036918	Ttc7	ENSMUST00000148554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036918	Ttc7	ENSMUST00000154255	ENSMUSP00000114181	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	1.16	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036918	Ttc7	ENSMUST00000234468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036918	Ttc7	ENSMUST00000127970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036918	Ttc7	ENSMUST00000041110	ENSMUSP00000040771	TRANSLATION	protein_coding	-	CCDS29016.1	1	858	0	15.99	1.5	35.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036918	Ttc7	ENSMUST00000125875	ENSMUSP00000115351	TRANSLATION	protein_coding	-	-	2	822	0	14.99	0	17.5	0	-4,-5	-	-	6.942	MINOR
ENSMUSG00000036918	Ttc7	ENSMUST00000148126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024039	Cbs	ENSMUST00000118504	ENSMUSP00000113209	TRANSLATION	protein_coding	-	CCDS28610.1	1	547	37	14.87	1.5	253.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024039	Cbs	ENSMUST00000078509	ENSMUSP00000077597	TRANSLATION	protein_coding	-	CCDS28610.1	1	547	37	14.87	1.5	253.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024039	Cbs	ENSMUST00000151597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024039	Cbs	ENSMUST00000128351	ENSMUSP00000158148	TRANSLATION	protein_coding	start/stop	-	3	252	24	7.36	0	167.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024039	Cbs	ENSMUST00000151718	ENSMUSP00000117454	TRANSLATION	protein_coding	stop	-	5	179	15	3.96	0	98.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024039	Cbs	ENSMUST00000236853	ENSMUSP00000158269	TRANSLATION	protein_coding	-	CCDS28609.1	-	561	37	14.62	0.5	253.7	0	-4,-5	-	-	17.502	ALTERNATIVE:2
ENSMUSG00000024039	Cbs	ENSMUST00000143982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024039	Cbs	ENSMUST00000155814	ENSMUSP00000118472	TRANSLATION	protein_coding	stop	-	3	193	15	4.79	0	114.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024039	Cbs	ENSMUST00000236909	ENSMUSP00000158373	TRANSLATION	protein_coding	stop	-	-	75	9	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024039	Cbs	ENSMUST00000235180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024039	Cbs	ENSMUST00000067801	ENSMUSP00000066878	TRANSLATION	protein_coding	-	CCDS28609.1	1	561	37	14.62	0.5	253.7	0	-4,-5	-	-	17.502	PRINCIPAL:4
ENSMUSG00000024039	Cbs	ENSMUST00000135425	ENSMUSP00000118785	TRANSLATION	protein_coding	stop	-	5	174	15	3.96	0	95.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039628	Hs3st6	ENSMUST00000234340	ENSMUSP00000157161	TRANSLATION	nonsense_mediated_decay	-	-	-	138	9	0.93	0	23.7	1	-3,-4	-	-	-1	MINOR
ENSMUSG00000039628	Hs3st6	ENSMUST00000044922	ENSMUSP00000040919	TRANSLATION	protein_coding	-	CCDS28496.1	1	342	21	1.93	1.5	142.6	1	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000039628	Hs3st6	ENSMUST00000235111	ENSMUSP00000157084	TRANSLATION	nonsense_mediated_decay	-	-	-	147	9	0.996	0	24.5	1	-3,-4	-	-	-1	MINOR
ENSMUSG00000039628	Hs3st6	ENSMUST00000234202	ENSMUSP00000157206	TRANSLATION	protein_coding	-	-	-	332	21	1.6	1	129.9	1	-3,-4	-	-	16.212	MINOR
ENSMUSG00000024007	Ppil1	ENSMUST00000234880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024007	Ppil1	ENSMUST00000234315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024007	Ppil1	ENSMUST00000234139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024007	Ppil1	ENSMUST00000135123	ENSMUSP00000115705	TRANSLATION	nonsense_mediated_decay	-	-	5	64	0	0.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024007	Ppil1	ENSMUST00000024802	ENSMUSP00000024802	TRANSLATION	protein_coding	-	CCDS28593.1	1	166	8	3.25	16.2	172	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024007	Ppil1	ENSMUST00000129157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024007	Ppil1	ENSMUST00000136811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079547	H2-DMb1	ENSMUST00000174765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079547	H2-DMb1	ENSMUST00000114232	ENSMUSP00000109870	TRANSLATION	protein_coding	-	CCDS37581.1	1	261	0	2.9	0.5	170.4	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000079547	H2-DMb1	ENSMUST00000173262	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067942	Zfp160	ENSMUST00000231482	ENSMUSP00000156357	TRANSLATION	protein_coding	-	-	-	71	0	0.5	0	0	0	-4,-6	-	-	1.032	MINOR
ENSMUSG00000067942	Zfp160	ENSMUST00000088811	ENSMUSP00000086191	TRANSLATION	protein_coding	-	CCDS28434.1	1	650	72	2.9	1.5	547.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067942	Zfp160	ENSMUST00000232320	ENSMUSP00000156216	TRANSLATION	protein_coding	-	-	-	110	0	1.3	0	85.9	0	-4,-5	-	-	2.688	MINOR
ENSMUSG00000067942	Zfp160	ENSMUST00000232663	ENSMUSP00000156064	TRANSLATION	protein_coding	-	-	-	107	0	1.3	0	85.9	0	-4,-5	-	-	2.688	MINOR
ENSMUSG00000067942	Zfp160	ENSMUST00000232354	ENSMUSP00000155977	TRANSLATION	protein_coding	stop	-	-	267	17	2.3	0	183.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067942	Zfp160	ENSMUST00000231679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067942	Zfp160	ENSMUST00000232473	ENSMUSP00000155916	TRANSLATION	protein_coding	-	-	-	71	0	0.5	0	0	0	-4,-6	-	-	1.032	MINOR
ENSMUSG00000067942	Zfp160	ENSMUST00000232595	ENSMUSP00000156115	TRANSLATION	protein_coding	-	-	-	93	0	1.3	0	85.9	0	-4,-5	-	-	2.688	MINOR
ENSMUSG00000049760	Micos13	ENSMUST00000233235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049760	Micos13	ENSMUST00000052832	ENSMUSP00000052908	TRANSLATION	protein_coding	-	CCDS28908.1	1	119	0	0	7.5	88.5	0	-1,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000049760	Micos13	ENSMUST00000233103	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049760	Micos13	ENSMUST00000233386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049760	Micos13	ENSMUST00000233299	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023266	Frs3	ENSMUST00000128734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023266	Frs3	ENSMUST00000113296	ENSMUSP00000108921	TRANSLATION	protein_coding	-	CCDS28854.1	1	492	0	3.25	1.5	90.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023266	Frs3	ENSMUST00000139405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023266	Frs3	ENSMUST00000138316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023266	Frs3	ENSMUST00000156118	ENSMUSP00000121698	TRANSLATION	protein_coding	stop	-	3	36	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024174	Pot1b	ENSMUST00000086876	ENSMUSP00000084089	TRANSLATION	protein_coding	-	CCDS50147.1	5	640	0	13.7	1.5	236.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024174	Pot1b	ENSMUST00000233557	ENSMUSP00000156507	TRANSLATION	protein_coding	stop	-	-	133	0	3	0	101.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024174	Pot1b	ENSMUST00000233972	ENSMUSP00000156746	TRANSLATION	protein_coding	-	-	-	623	0	12.7	0.5	236.8	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000024174	Pot1b	ENSMUST00000233301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024174	Pot1b	ENSMUST00000233802	ENSMUSP00000156762	TRANSLATION	nonsense_mediated_decay	-	-	-	352	0	6.7	0	236.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052469	Tcp10c	ENSMUST00000097403	ENSMUSP00000095015	TRANSLATION	protein_coding	-	CCDS49953.1	1	482	0	3.75	0.5	263.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052469	Tcp10c	ENSMUST00000233944	ENSMUSP00000156427	TRANSLATION	protein_coding	stop	-	-	143	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052469	Tcp10c	ENSMUST00000233884	ENSMUSP00000156583	TRANSLATION	nonsense_mediated_decay	-	-	-	363	0	1	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005824	Tnfsf14	ENSMUST00000005976	ENSMUSP00000005976	TRANSLATION	protein_coding	-	CCDS28928.1	1	239	0	1.8	1.5	110	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000054901	Arhgef33	ENSMUST00000224676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054901	Arhgef33	ENSMUST00000224966	ENSMUSP00000153018	TRANSLATION	protein_coding	-	-	-	49	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054901	Arhgef33	ENSMUST00000224002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054901	Arhgef33	ENSMUST00000226013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054901	Arhgef33	ENSMUST00000225223	ENSMUSP00000153484	TRANSLATION	protein_coding	-	-	-	88	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054901	Arhgef33	ENSMUST00000225018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054901	Arhgef33	ENSMUST00000224391	ENSMUSP00000153551	TRANSLATION	protein_coding	stop	-	-	143	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054901	Arhgef33	ENSMUST00000225548	ENSMUSP00000153111	TRANSLATION	protein_coding	-	-	-	81	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054901	Arhgef33	ENSMUST00000225658	ENSMUSP00000153062	TRANSLATION	protein_coding	-	-	-	62	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054901	Arhgef33	ENSMUST00000224631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054901	Arhgef33	ENSMUST00000068175	ENSMUSP00000063284	TRANSLATION	protein_coding	-	CCDS50189.1	5	850	0	0	0.5	51.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054901	Arhgef33	ENSMUST00000223878	ENSMUSP00000153224	TRANSLATION	protein_coding	-	CCDS50189.1	-	850	0	0	0.5	51.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035186	Ubd	ENSMUST00000038844	ENSMUSP00000035808	TRANSLATION	protein_coding	-	CCDS28737.1	1	162	0	0.866	1.5	86.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067288	Rps28	ENSMUST00000174788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067288	Rps28	ENSMUST00000173844	ENSMUSP00000133357	TRANSLATION	protein_coding	-	CCDS37571.1	1	69	0	2	17.5	120.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000067288	Rps28	ENSMUST00000173879	ENSMUSP00000134240	TRANSLATION	protein_coding	start	-	2	56	0	1.5	0	110.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000067288	Rps28	ENSMUST00000234017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067288	Rps28	ENSMUST00000166693	ENSMUSP00000133642	TRANSLATION	protein_coding	-	CCDS37571.1	5	69	0	2	17.5	120.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000067288	Rps28	ENSMUST00000173480	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067288	Rps28	ENSMUST00000173019	ENSMUSP00000134615	TRANSLATION	protein_coding	-	CCDS37571.1	3	69	0	2	17.5	120.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000067288	Rps28	ENSMUST00000087342	ENSMUSP00000110013	TRANSLATION	protein_coding	-	CCDS37571.1	1	69	0	2	17.5	120.2	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000024122	Pdpk1	ENSMUST00000115409	ENSMUSP00000111068	TRANSLATION	protein_coding	-	-	5	432	13	9.13	2.4	210.9	0	-4,-7	-	-	0.528	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000052462	ENSMUSP00000061942	TRANSLATION	protein_coding	-	CCDS70767.1	1	532	23	12.38	3.9	377.1	0	-4,-7	-	-	19.094	ALTERNATIVE:2
ENSMUSG00000024122	Pdpk1	ENSMUST00000147199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024122	Pdpk1	ENSMUST00000154982	ENSMUSP00000115618	TRANSLATION	protein_coding	stop	-	2	111	9	2.55	0	29.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000144533	ENSMUSP00000121771	TRANSLATION	protein_coding	stop	-	2	128	10	3.05	0	46.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000115411	ENSMUSP00000111070	TRANSLATION	protein_coding	-	CCDS37483.1	1	522	22	11.05	0.5	330.1	0	-4,-7	-	-	11.856	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000150578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024122	Pdpk1	ENSMUST00000115407	ENSMUSP00000111066	TRANSLATION	protein_coding	-	-	5	457	17	9.55	1.2	228.5	0	-4,-7	-	-	2.416	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000102927	ENSMUSP00000099991	TRANSLATION	protein_coding	-	CCDS28474.1	1	559	23	12.38	6.3	377.1	0	-4,-7	-	-	20	PRINCIPAL:3
ENSMUSG00000024122	Pdpk1	ENSMUST00000128997	ENSMUSP00000120548	TRANSLATION	protein_coding	stop	-	2	56	0	0.64	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024122	Pdpk1	ENSMUST00000140906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023805	Synj2	ENSMUST00000142409	ENSMUSP00000120006	TRANSLATION	protein_coding	stop	-	1	660	2	8.2	0	162.5	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000115785	ENSMUSP00000111451	TRANSLATION	protein_coding	-	CCDS70757.1	1	1118	2	9.4	0.5	235.8	1	-4,-5	-	-	2	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000115784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023805	Synj2	ENSMUST00000115789	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023805	Synj2	ENSMUST00000126881	ENSMUSP00000115371	TRANSLATION	protein_coding	start	-	5	384	0	3.03	0	203.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000232567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023805	Synj2	ENSMUST00000115787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023805	Synj2	ENSMUST00000080283	ENSMUSP00000079164	TRANSLATION	protein_coding	-	CCDS49932.1	1	1434	2	12.51	0.5	455.5	1	-4,-7	-	-	14	ALTERNATIVE:2
ENSMUSG00000023805	Synj2	ENSMUST00000115790	ENSMUSP00000111456	TRANSLATION	protein_coding	-	-	5	1394	2	11.96	0.5	439.9	1	-4,-5	-	-	11.966	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000115791	ENSMUSP00000111457	TRANSLATION	protein_coding	-	CCDS49931.1	1	1479	2	12.51	0.5	455.5	1	-4,-7	-	-	14	PRINCIPAL:4
ENSMUSG00000023805	Synj2	ENSMUST00000134767	ENSMUSP00000138449	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	0.55	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000115788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023805	Synj2	ENSMUST00000130661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023805	Synj2	ENSMUST00000061091	ENSMUSP00000060382	TRANSLATION	protein_coding	-	CCDS28365.1	1	1216	2	11.96	0.5	440.5	1	-4,-5	-	-	12.002	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000115786	ENSMUSP00000111452	TRANSLATION	protein_coding	-	-	1	535	2	5.47	0	85.6	1	-4,-5	-	-	2	MINOR
ENSMUSG00000023805	Synj2	ENSMUST00000154114	ENSMUSP00000122316	TRANSLATION	protein_coding	start	-	5	725	2	7.31	0	237.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000024097	Srsf7	ENSMUST00000063417	ENSMUSP00000070983	TRANSLATION	protein_coding	-	CCDS28988.1	1	238	4	2.564	7.5	81.9	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000024097	Srsf7	ENSMUST00000234889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024097	Srsf7	ENSMUST00000234577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024097	Srsf7	ENSMUST00000235069	ENSMUSP00000157383	TRANSLATION	protein_coding	-	-	-	235	4	2.564	7.5	81.9	0	-4,-5	-	-	19	ALTERNATIVE:1
ENSMUSG00000024097	Srsf7	ENSMUST00000235036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024097	Srsf7	ENSMUST00000234095	ENSMUSP00000157284	TRANSLATION	protein_coding	-	-	-	154	4	0.8	0	19.9	0	-4,-7	-	-	7.33	MINOR
ENSMUSG00000024097	Srsf7	ENSMUST00000234503	ENSMUSP00000157265	TRANSLATION	nonsense_mediated_decay	-	-	-	137	4	2.564	0	81.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024097	Srsf7	ENSMUST00000234696	ENSMUSP00000157263	TRANSLATION	protein_coding	-	-	-	215	4	2.564	2.7	81.9	0	-4,-5	-	-	16.786	MINOR
ENSMUSG00000045202	Olfr123	ENSMUST00000216051	ENSMUSP00000149802	TRANSLATION	protein_coding	-	CCDS28765.1	5	309	0	0.3	1.8	150.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045202	Olfr123	ENSMUST00000214770	ENSMUSP00000150780	TRANSLATION	protein_coding	-	CCDS28765.1	5	309	0	0.3	1.8	150.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045202	Olfr123	ENSMUST00000054748	ENSMUSP00000058678	TRANSLATION	protein_coding	-	CCDS28765.1	-	309	0	0.3	1.8	150.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025433	Crisp3	ENSMUST00000026499	ENSMUSP00000026499	TRANSLATION	protein_coding	-	CCDS28783.1	1	241	2	5.6	0.5	95.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000023845	Lnpep	ENSMUST00000231515	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023845	Lnpep	ENSMUST00000232462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023845	Lnpep	ENSMUST00000231291	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023845	Lnpep	ENSMUST00000041047	ENSMUSP00000036998	TRANSLATION	protein_coding	-	CCDS37457.1	1	1025	14	16.75	5.1	506.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000023845	Lnpep	ENSMUST00000232515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023845	Lnpep	ENSMUST00000231666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053835	H2-T24	ENSMUST00000174063	ENSMUSP00000133476	TRANSLATION	protein_coding	-	-	3	128	0	0.9	0	78.3	0	-1,-5	-	-	1.32	MINOR
ENSMUSG00000053835	H2-T24	ENSMUST00000113760	ENSMUSP00000109389	TRANSLATION	protein_coding	-	CCDS37607.1	2	363	0	3.24	0.5	214.5	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024371	C2	ENSMUST00000152417	ENSMUSP00000123536	TRANSLATION	protein_coding	-	-	5	623	11	14.6	0	277.4	0	3,-2	-	-	12.6	MINOR
ENSMUSG00000024371	C2	ENSMUST00000174880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024371	C2	ENSMUST00000148431	ENSMUSP00000120009	TRANSLATION	protein_coding	-	-	5	483	11	11.8	0	184.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000024371	C2	ENSMUST00000127795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024371	C2	ENSMUST00000134300	ENSMUSP00000114241	TRANSLATION	protein_coding	start/stop	-	3	180	5	3.33	0	70.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024371	C2	ENSMUST00000130728	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024371	C2	ENSMUST00000174279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024371	C2	ENSMUST00000025230	ENSMUSP00000025230	TRANSLATION	protein_coding	-	CCDS28664.1	1	760	11	16.3	0.5	310.7	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000033972	Zfp944	ENSMUST00000115535	ENSMUSP00000111197	TRANSLATION	protein_coding	-	CCDS50000.1	5	492	44	1.6	0.5	270.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000092074	Dynlt1a	ENSMUST00000232591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092074	Dynlt1a	ENSMUST00000169415	ENSMUSP00000127990	TRANSLATION	protein_coding	-	CCDS49935.1	1	113	0	3.33	21.5	110.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000092074	Dynlt1a	ENSMUST00000232499	ENSMUSP00000156368	TRANSLATION	protein_coding	-	-	-	112	0	2.58	0	80.9	0	-4,-5	-	-	8.724	MINOR
ENSMUSG00000024182	Axin1	ENSMUST00000168282	ENSMUSP00000127182	TRANSLATION	protein_coding	start/stop	-	3	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024182	Axin1	ENSMUST00000163421	ENSMUSP00000132000	TRANSLATION	protein_coding	-	CCDS50042.1	5	832	0	3.6	1.5	326.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024182	Axin1	ENSMUST00000169268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024182	Axin1	ENSMUST00000118904	ENSMUSP00000113756	TRANSLATION	protein_coding	-	CCDS50042.1	1	832	0	3.6	1.5	326.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024182	Axin1	ENSMUST00000074370	ENSMUSP00000073974	TRANSLATION	protein_coding	-	CCDS28547.2	1	868	0	3.6	0.5	326.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000056515	Rab31	ENSMUST00000070673	ENSMUSP00000068195	TRANSLATION	protein_coding	-	CCDS50166.1	1	195	24	5.35	12.2	187.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000056515	Rab31	ENSMUST00000233258	ENSMUSP00000156917	TRANSLATION	protein_coding	-	-	-	44	13	1.25	0	38.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025739	Gng13	ENSMUST00000172002	ENSMUSP00000131648	TRANSLATION	protein_coding	-	CCDS37503.1	1	67	0	0	15.5	53.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000025739	Gng13	ENSMUST00000115108	ENSMUSP00000110760	TRANSLATION	protein_coding	-	CCDS37503.1	1	67	0	0	15.5	53.9	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024160	Spsb3	ENSMUST00000120943	ENSMUSP00000112492	TRANSLATION	protein_coding	-	-	1	354	0	1.56	1	67.4	0	-4,0	-	-	11.112	ALTERNATIVE:2
ENSMUSG00000024160	Spsb3	ENSMUST00000119829	ENSMUSP00000112589	TRANSLATION	protein_coding	-	-	2	379	0	1.83	1.5	56.8	0	-4,0	-	-	11.058	MINOR
ENSMUSG00000024160	Spsb3	ENSMUST00000168265	ENSMUSP00000126878	TRANSLATION	protein_coding	-	CCDS50022.1	1	500	0	1.56	0.5	67.4	0	-4,-6	-	-	11.112	ALTERNATIVE:2
ENSMUSG00000024160	Spsb3	ENSMUST00000130194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024160	Spsb3	ENSMUST00000024976	ENSMUSP00000024976	TRANSLATION	protein_coding	-	CCDS28501.1	1	389	0	1.56	1.5	67.4	0	-2,-5	-	-	11.112	PRINCIPAL:3
ENSMUSG00000024160	Spsb3	ENSMUST00000117890	ENSMUSP00000112380	TRANSLATION	protein_coding	-	-	1	354	0	1.56	1	67.4	0	-4,0	-	-	11.112	ALTERNATIVE:2
ENSMUSG00000024160	Spsb3	ENSMUST00000134932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024160	Spsb3	ENSMUST00000144430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024160	Spsb3	ENSMUST00000068508	ENSMUSP00000068567	TRANSLATION	protein_coding	-	-	1	328	0	1.56	0	50.5	0	-4,0	-	-	9.606	MINOR
ENSMUSG00000045817	Zfp36l2	ENSMUST00000060366	ENSMUSP00000050820	TRANSLATION	protein_coding	-	CCDS28998.1	1	484	8	0.2	0.5	218.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055817	Mta3	ENSMUST00000112349	ENSMUSP00000107968	TRANSLATION	protein_coding	-	CCDS50195.1	1	514	8	6.4	2.9	212.1	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000055817	Mta3	ENSMUST00000112350	ENSMUSP00000107969	TRANSLATION	protein_coding	-	CCDS50197.1	1	513	8	6.4	2.9	212.1	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000055817	Mta3	ENSMUST00000067826	ENSMUSP00000068931	TRANSLATION	protein_coding	-	CCDS28997.1	1	591	8	7	1.5	210.6	0	-4,-5	-	-	17.91	PRINCIPAL:3
ENSMUSG00000055817	Mta3	ENSMUST00000177069	ENSMUSP00000135064	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055817	Mta3	ENSMUST00000112352	ENSMUSP00000107971	TRANSLATION	protein_coding	-	CCDS50196.1	1	586	8	7	0.5	212.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000055817	Mta3	ENSMUST00000177416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055817	Mta3	ENSMUST00000176054	ENSMUSP00000134775	TRANSLATION	protein_coding	start	-	5	251	4	1.4	0	37.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055817	Mta3	ENSMUST00000175920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055817	Mta3	ENSMUST00000176816	ENSMUSP00000135752	TRANSLATION	protein_coding	start	-	3	271	5	5.6	0	56	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015452	Ager	ENSMUST00000184846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015452	Ager	ENSMUST00000173992	ENSMUSP00000134579	TRANSLATION	protein_coding	-	CCDS70796.1	1	384	0	7.59	0.5	130.7	3	3,-2	-	-	9.306	MINOR
ENSMUSG00000015452	Ager	ENSMUST00000173589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000184805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000172932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000173551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000174554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000174496	ENSMUSP00000134401	TRANSLATION	protein_coding	-	CCDS70795.1	1	393	0	7.92	1.5	155.8	3	3,-2	-	-	11.472	ALTERNATIVE:2
ENSMUSG00000015452	Ager	ENSMUST00000172757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000174640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015452	Ager	ENSMUST00000015596	ENSMUSP00000015596	TRANSLATION	protein_coding	-	CCDS28649.1	1	402	0	8.184	2.7	155.8	3	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000015452	Ager	ENSMUST00000174069	ENSMUSP00000133391	TRANSLATION	nonsense_mediated_decay	-	-	1	333	0	7.344	0	155.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000015452	Ager	ENSMUST00000170161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063240	Olfr133	ENSMUST00000173610	ENSMUSP00000133824	TRANSLATION	protein_coding	stop	-	3	95	0	0.6	0	34.4	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000063240	Olfr133	ENSMUST00000113636	ENSMUSP00000109266	TRANSLATION	protein_coding	-	CCDS28776.1	-	312	0	0.9	5.1	175.2	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063240	Olfr133	ENSMUST00000215078	ENSMUSP00000149451	TRANSLATION	protein_coding	-	CCDS28776.1	5	312	0	0.9	5.1	175.2	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000063240	Olfr133	ENSMUST00000215549	ENSMUSP00000150597	TRANSLATION	protein_coding	-	CCDS28776.1	5	312	0	0.9	5.1	175.2	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000095658	Vmn2r-ps130	ENSMUST00000175853	ENSMUSP00000135186	TRANSLATION	protein_coding	-	-	5	855	0	2.74	0.5	370.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059714	Flot1	ENSMUST00000001569	ENSMUSP00000001569	TRANSLATION	protein_coding	-	CCDS28705.1	1	428	0	3.6	9.7	120.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059714	Flot1	ENSMUST00000174080	ENSMUSP00000134227	TRANSLATION	protein_coding	-	-	5	380	0	2.6	1.2	62.5	0	-4,-7	-	-	6.609	MINOR
ENSMUSG00000059714	Flot1	ENSMUST00000173493	ENSMUSP00000134699	TRANSLATION	protein_coding	stop	-	5	192	0	3.6	0	84.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059714	Flot1	ENSMUST00000173628	ENSMUSP00000133289	TRANSLATION	nonsense_mediated_decay	-	-	5	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059714	Flot1	ENSMUST00000173337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059714	Flot1	ENSMUST00000172846	ENSMUSP00000134681	TRANSLATION	protein_coding	stop	-	2	192	0	3.6	0	84.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059714	Flot1	ENSMUST00000173381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059714	Flot1	ENSMUST00000173147	ENSMUSP00000133454	TRANSLATION	protein_coding	stop	-	5	196	0	3.6	0	84.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059714	Flot1	ENSMUST00000174297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059714	Flot1	ENSMUST00000174227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059714	Flot1	ENSMUST00000173273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117311	Esp22	ENSMUST00000233133	ENSMUSP00000156441	TRANSLATION	protein_coding	-	-	-	111	0	0	0	92.7	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000025728	Pigq	ENSMUST00000237570	ENSMUSP00000157676	TRANSLATION	protein_coding	-	-	-	516	0	0	0	226	12	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000025728	Pigq	ENSMUST00000139078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025728	Pigq	ENSMUST00000148307	ENSMUSP00000118632	TRANSLATION	protein_coding	stop	-	2	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000207777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025728	Pigq	ENSMUST00000156924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025728	Pigq	ENSMUST00000208071	ENSMUSP00000146387	TRANSLATION	protein_coding	-	-	5	516	0	0	0	226	12	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000025728	Pigq	ENSMUST00000208499	ENSMUSP00000146415	TRANSLATION	protein_coding	start/stop	-	1	35	0	0	0	0	1	3,-2	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000140304	ENSMUSP00000146785	TRANSLATION	protein_coding	-	-	1	378	0	0	0	0	4	-4,-6	-	-	0	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000135253	ENSMUSP00000122239	TRANSLATION	protein_coding	start/stop	-	5	227	0	0	0	0	10	3,-2	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000124032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025728	Pigq	ENSMUST00000148045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025728	Pigq	ENSMUST00000026823	ENSMUSP00000026823	TRANSLATION	protein_coding	-	CCDS28538.1	1	581	0	0	2.7	226	12	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000025728	Pigq	ENSMUST00000145745	ENSMUSP00000119772	TRANSLATION	protein_coding	stop	-	2	200	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000139226	ENSMUSP00000115447	TRANSLATION	protein_coding	stop	-	5	248	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000208242	ENSMUSP00000147041	TRANSLATION	nonsense_mediated_decay	start	-	1	86	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000207496	ENSMUSP00000147200	TRANSLATION	nonsense_mediated_decay	start	-	5	102	0	0	0	142.1	4	-1,-3	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000123929	ENSMUSP00000120852	TRANSLATION	nonsense_mediated_decay	start	-	3	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000148382	ENSMUSP00000119871	TRANSLATION	protein_coding	stop	-	3	63	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000097368	ENSMUSP00000094981	TRANSLATION	protein_coding	-	CCDS70774.1	1	641	0	0	0.5	210.3	12	-4,-6	-	-	5.058	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000207073	ENSMUSP00000146634	TRANSLATION	protein_coding	start	-	5	139	0	0	0	48.7	2	-4,0	-	-	-1	MINOR
ENSMUSG00000025728	Pigq	ENSMUST00000208043	ENSMUSP00000146704	TRANSLATION	protein_coding	-	CCDS28538.1	5	581	0	0	2.7	226	12	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000025728	Pigq	ENSMUST00000133650	ENSMUSP00000117102	TRANSLATION	protein_coding	start	-	5	452	0	0	0	226	12	-4,-7	-	-	-1	MINOR
ENSMUSG00000038838	Vars2	ENSMUST00000164978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000174129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000165787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000043674	ENSMUSP00000047917	TRANSLATION	protein_coding	-	CCDS37602.1	1	1060	6	15.795	1.5	709.5	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000038838	Vars2	ENSMUST00000170701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000171536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000164404	ENSMUSP00000126084	TRANSLATION	nonsense_mediated_decay	start	-	5	215	0	3.84	0	162.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038838	Vars2	ENSMUST00000164295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000168885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038838	Vars2	ENSMUST00000168922	ENSMUSP00000129196	TRANSLATION	nonsense_mediated_decay	start	-	1	581	4	8.865	0	438.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038838	Vars2	ENSMUST00000169093	ENSMUSP00000126794	TRANSLATION	nonsense_mediated_decay	start	-	5	112	0	1.95	0	96.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038838	Vars2	ENSMUST00000165144	ENSMUSP00000132897	TRANSLATION	nonsense_mediated_decay	-	-	3	75	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000051341	Zfp52	ENSMUST00000233281	ENSMUSP00000156662	TRANSLATION	protein_coding	-	CCDS37464.1	-	724	74	1.4	1.5	295.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051341	Zfp52	ENSMUST00000079242	ENSMUSP00000078233	TRANSLATION	protein_coding	-	CCDS37464.1	3	724	74	1.4	1.5	295.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073471	Rsph3a	ENSMUST00000231320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073471	Rsph3a	ENSMUST00000232223	ENSMUSP00000156325	TRANSLATION	protein_coding	-	-	-	515	0	0	0.5	422.7	0	-4,-1	-	-	5.952	ALTERNATIVE:2
ENSMUSG00000073471	Rsph3a	ENSMUST00000231845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073471	Rsph3a	ENSMUST00000232627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073471	Rsph3a	ENSMUST00000231900	ENSMUSP00000156196	TRANSLATION	protein_coding	start	-	-	133	0	0	0	171.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073471	Rsph3a	ENSMUST00000097423	ENSMUSP00000095034	TRANSLATION	protein_coding	-	CCDS49943.1	1	516	0	0	0.5	423.5	0	-4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000073471	Rsph3a	ENSMUST00000232233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046070	Igfals	ENSMUST00000234754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046070	Igfals	ENSMUST00000234862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046070	Igfals	ENSMUST00000234188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046070	Igfals	ENSMUST00000050714	ENSMUSP00000060169	TRANSLATION	protein_coding	-	CCDS37497.1	1	603	0	0.6	1.5	245.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046070	Igfals	ENSMUST00000234675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046070	Igfals	ENSMUST00000234802	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055240	Zfp101	ENSMUST00000167107	ENSMUSP00000132508	TRANSLATION	protein_coding	-	CCDS37565.1	1	612	60	1.9	0.5	317.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055240	Zfp101	ENSMUST00000183047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055240	Zfp101	ENSMUST00000173151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055240	Zfp101	ENSMUST00000174417	ENSMUSP00000134459	TRANSLATION	protein_coding	stop	-	3	129	3	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055240	Zfp101	ENSMUST00000174512	ENSMUSP00000133873	TRANSLATION	protein_coding	-	-	1	65	0	1.5	0	79	0	-4,-5	-	-	4.734	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000230858	ENSMUSP00000155477	TRANSLATION	protein_coding	start/stop	-	-	169	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000237692	ENSMUSP00000158128	TRANSLATION	protein_coding	stop	-	-	572	0	5.93	0	148.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000230982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024002	Brd4	ENSMUST00000127893	ENSMUSP00000115163	TRANSLATION	protein_coding	stop	-	1	557	0	5.93	0	148.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000125899	ENSMUSP00000115277	TRANSLATION	nonsense_mediated_decay	-	-	1	146	0	2.33	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000003726	ENSMUSP00000003726	TRANSLATION	protein_coding	-	CCDS70784.1	1	1401	0	5.93	0.5	336.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024002	Brd4	ENSMUST00000237008	ENSMUSP00000158466	TRANSLATION	protein_coding	stop	-	-	133	0	2	0	54.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000235598	ENSMUSP00000157981	TRANSLATION	nonsense_mediated_decay	-	-	-	146	0	2.33	0	71	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000121285	ENSMUSP00000113070	TRANSLATION	protein_coding	-	CCDS50057.1	1	1400	0	5.93	0.5	336.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024002	Brd4	ENSMUST00000120276	ENSMUSP00000112474	TRANSLATION	protein_coding	-	CCDS37554.1	5	723	0	5.93	2.9	250.5	0	-4,-5	-	-	6.834	MINOR
ENSMUSG00000024002	Brd4	ENSMUST00000229020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024002	Brd4	ENSMUST00000230565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038880	Mrps34	ENSMUST00000138648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038880	Mrps34	ENSMUST00000154236	ENSMUSP00000120985	TRANSLATION	nonsense_mediated_decay	-	-	2	218	0	2.5	5.1	163.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038880	Mrps34	ENSMUST00000043907	ENSMUSP00000045111	TRANSLATION	protein_coding	-	CCDS28502.1	1	218	0	2.5	5.1	163.7	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000095858	Olfr104-ps	ENSMUST00000178766	ENSMUSP00000154728	TRANSLATION	protein_coding	-	-	5	319	0	0	1	177.2	6	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000095858	Olfr104-ps	ENSMUST00000215398	ENSMUSP00000154761	TRANSLATION	protein_coding	-	-	5	322	0	0	1	177.2	6	-4,-7	-	-	6	PRINCIPAL:5
ENSMUSG00000095858	Olfr104-ps	ENSMUST00000216996	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002249	Tead3	ENSMUST00000233330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002249	Tead3	ENSMUST00000114799	ENSMUSP00000110447	TRANSLATION	protein_coding	-	CCDS50046.1	1	465	0	8.3	0.5	0	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000002249	Tead3	ENSMUST00000156862	ENSMUSP00000115443	TRANSLATION	protein_coding	-	-	1	439	0	8.3	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002249	Tead3	ENSMUST00000154873	ENSMUSP00000118582	TRANSLATION	protein_coding	-	-	1	439	0	8.3	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002249	Tead3	ENSMUST00000226172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002249	Tead3	ENSMUST00000146668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002249	Tead3	ENSMUST00000151557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002249	Tead3	ENSMUST00000219703	ENSMUSP00000152030	TRANSLATION	protein_coding	-	-	1	439	0	8.3	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000002249	Tead3	ENSMUST00000127212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023882	Zfp54	ENSMUST00000167749	ENSMUSP00000127089	TRANSLATION	protein_coding	stop	-	2	233	6	1.6	0	102.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023882	Zfp54	ENSMUST00000165230	ENSMUSP00000132983	TRANSLATION	protein_coding	-	CCDS37462.1	1	585	54	1.6	0.5	335.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023882	Zfp54	ENSMUST00000007884	ENSMUSP00000007884	TRANSLATION	protein_coding	-	CCDS37462.1	1	585	54	1.6	0.5	335.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032842	Abcc10	ENSMUST00000095261	ENSMUSP00000092895	TRANSLATION	protein_coding	-	CCDS28825.1	1	1460	32	13.784	0.5	367.1	19	-4,-7	-	-	17.46	PRINCIPAL:3
ENSMUSG00000032842	Abcc10	ENSMUST00000167360	ENSMUSP00000131843	TRANSLATION	protein_coding	-	CCDS50124.1	1	1501	32	13.784	0.5	367.1	19	-4,-7	-	-	17.46	ALTERNATIVE:2
ENSMUSG00000032842	Abcc10	ENSMUST00000171584	ENSMUSP00000132561	TRANSLATION	nonsense_mediated_decay	-	-	5	487	0	0.28	0	44.5	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000032842	Abcc10	ENSMUST00000168490	ENSMUSP00000132760	TRANSLATION	protein_coding	stop	-	3	245	17	3.47	0	69.8	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000032842	Abcc10	ENSMUST00000165733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032842	Abcc10	ENSMUST00000047970	ENSMUSP00000038041	TRANSLATION	protein_coding	-	CCDS84315.1	1	1526	32	14.054	0.5	363.7	19	-4,-7	-	-	17.796	ALTERNATIVE:2
ENSMUSG00000032842	Abcc10	ENSMUST00000170168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079444	Gm21981	ENSMUST00000143789	ENSMUSP00000119045	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	369	15	0.8	0.5	111.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000005823	Gpr108	ENSMUST00000005975	ENSMUSP00000005975	TRANSLATION	protein_coding	-	-	1	562	0	0	0.5	322.7	2	-1,-4	-	-	6	ALTERNATIVE:2
ENSMUSG00000005823	Gpr108	ENSMUST00000233492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005823	Gpr108	ENSMUST00000232778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005823	Gpr108	ENSMUST00000233568	ENSMUSP00000156910	TRANSLATION	protein_coding	-	CCDS28929.1	-	569	0	0	0.5	322.7	2	-1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000036858	Ptcra	ENSMUST00000041012	ENSMUSP00000035683	TRANSLATION	protein_coding	-	CCDS28840.1	1	206	0	1.65	1.5	224.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000034868	Myl12b	ENSMUST00000137537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034868	Myl12b	ENSMUST00000038446	ENSMUSP00000042364	TRANSLATION	protein_coding	-	CCDS28954.1	1	172	3	3	21.5	55.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000034868	Myl12b	ENSMUST00000131820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034868	Myl12b	ENSMUST00000233004	ENSMUSP00000156763	TRANSLATION	protein_coding	-	CCDS28954.1	-	172	3	3	21.5	55.5	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000095093	Vmn2r111	ENSMUST00000234296	ENSMUSP00000157212	TRANSLATION	protein_coding	-	-	-	561	0	2.04	0	111.4	0	4,-1	-	-	2.238	MINOR
ENSMUSG00000095093	Vmn2r111	ENSMUST00000234223	ENSMUSP00000157355	TRANSLATION	protein_coding	-	-	-	547	0	2.2	0	111.4	0	4,-1	-	-	2.562	MINOR
ENSMUSG00000095093	Vmn2r111	ENSMUST00000092491	ENSMUSP00000090148	TRANSLATION	protein_coding	-	CCDS50002.1	1	857	4	3.92	1.5	372.6	8	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000095093	Vmn2r111	ENSMUST00000234027	ENSMUSP00000157310	TRANSLATION	protein_coding	-	-	-	817	4	3.32	0	363.4	8	4,-1	-	-	14.248	MINOR
ENSMUSG00000095093	Vmn2r111	ENSMUST00000234301	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090700	Cyp4f40	ENSMUST00000165061	ENSMUSP00000129536	TRANSLATION	protein_coding	-	CCDS50060.1	1	524	30	7.94	5.1	430.3	1	-3,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000090700	Cyp4f40	ENSMUST00000234995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090700	Cyp4f40	ENSMUST00000235086	ENSMUSP00000157311	TRANSLATION	protein_coding	-	CCDS50060.1	-	524	30	7.94	5.1	430.3	1	-3,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000071192	Wfikkn1	ENSMUST00000176696	ENSMUSP00000135083	TRANSLATION	protein_coding	-	CCDS50038.1	3	552	0	0	0.5	182.5	0	2,-3	-	-	6	PRINCIPAL:2
ENSMUSG00000071192	Wfikkn1	ENSMUST00000095487	ENSMUSP00000093141	TRANSLATION	protein_coding	-	-	1	518	0	0	0	176.5	0	-4,-5	-	-	5.64	ALTERNATIVE:2
ENSMUSG00000069729	Arid1b	ENSMUST00000115797	ENSMUSP00000111463	TRANSLATION	protein_coding	-	CCDS49929.1	5	2244	0	2.78	0.5	444.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000069729	Arid1b	ENSMUST00000232180	ENSMUSP00000156119	TRANSLATION	protein_coding	-	-	-	2296	0	2.78	0	444.3	0	-2,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000069729	Arid1b	ENSMUST00000115799	ENSMUSP00000111465	TRANSLATION	protein_coding	-	-	5	1762	0	2.78	0	444.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000069729	Arid1b	ENSMUST00000092723	ENSMUSP00000090398	TRANSLATION	protein_coding	-	-	5	2243	0	2.78	0	444.3	0	-2,1	-	-	12	ALTERNATIVE:2
ENSMUSG00000069729	Arid1b	ENSMUST00000156775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069729	Arid1b	ENSMUST00000124362	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069729	Arid1b	ENSMUST00000146703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079557	Marchf2	ENSMUST00000172934	ENSMUSP00000134026	TRANSLATION	nonsense_mediated_decay	-	-	1	242	8	1.6	0	58.2	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000173454	ENSMUSP00000133940	TRANSLATION	protein_coding	start	-	3	177	8	1.6	0	58.2	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000167611	ENSMUSP00000127601	TRANSLATION	nonsense_mediated_decay	-	-	1	287	8	1.6	0.5	58.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000174040	ENSMUSP00000134437	TRANSLATION	protein_coding	stop	-	2	217	8	1.6	0	58.2	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000066121	ENSMUSP00000065225	TRANSLATION	protein_coding	-	CCDS28627.1	1	287	8	1.6	0.5	58.2	5	-4,-5	-	-	18	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000173392	ENSMUSP00000134255	TRANSLATION	protein_coding	stop	-	3	82	2	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000186022	ENSMUSP00000139724	TRANSLATION	protein_coding	-	CCDS28627.1	1	287	8	1.6	0.5	58.2	5	-4,-5	-	-	18	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000172767	ENSMUSP00000134220	TRANSLATION	protein_coding	-	CCDS57064.1	1	246	8	1.6	7.5	58.2	5	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000079557	Marchf2	ENSMUST00000173329	ENSMUSP00000133825	TRANSLATION	protein_coding	-	-	2	197	8	1.6	0	58.2	4	-4,-5	-	-	18	MINOR
ENSMUSG00000079557	Marchf2	ENSMUST00000173015	ENSMUSP00000133802	TRANSLATION	protein_coding	-	-	3	232	8	1.6	1	58.2	4	-4,-5	-	-	18	MINOR
ENSMUSG00000079710	Gm3448	ENSMUST00000097400	ENSMUSP00000095012	TRANSLATION	protein_coding	-	CCDS49961.1	5	191	0	0	1.5	74.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079710	Gm3448	ENSMUST00000232299	ENSMUSP00000156126	TRANSLATION	protein_coding	-	-	-	49	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000079710	Gm3448	ENSMUST00000179539	ENSMUSP00000137218	TRANSLATION	protein_coding	-	CCDS49961.1	1	191	0	0	1.5	74.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000038910	Plcl2	ENSMUST00000233823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038910	Plcl2	ENSMUST00000043938	ENSMUSP00000046584	TRANSLATION	protein_coding	-	CCDS28875.1	1	1128	12	0.6	1.7	529.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000034647	Ankrd12	ENSMUST00000233045	ENSMUSP00000156634	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034647	Ankrd12	ENSMUST00000129756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034647	Ankrd12	ENSMUST00000233407	ENSMUSP00000156536	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034647	Ankrd12	ENSMUST00000143516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034647	Ankrd12	ENSMUST00000139901	ENSMUSP00000156776	TRANSLATION	nonsense_mediated_decay	start	-	5	52	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034647	Ankrd12	ENSMUST00000150766	ENSMUSP00000114237	TRANSLATION	protein_coding	stop	-	1	441	0	2.6	0	71.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034647	Ankrd12	ENSMUST00000146090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034647	Ankrd12	ENSMUST00000038116	ENSMUSP00000039035	TRANSLATION	protein_coding	-	CCDS28943.1	5	2041	0	2.6	0.5	71.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034647	Ankrd12	ENSMUST00000124297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034647	Ankrd12	ENSMUST00000233978	ENSMUSP00000156436	TRANSLATION	protein_coding	start	-	-	125	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034647	Ankrd12	ENSMUST00000135136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003199	Mpnd	ENSMUST00000140926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003199	Mpnd	ENSMUST00000162883	ENSMUSP00000124128	TRANSLATION	protein_coding	-	-	5	437	3	1.35	0	24.9	0	-4,-5	-	-	10.584	MINOR
ENSMUSG00000003199	Mpnd	ENSMUST00000149441	ENSMUSP00000119745	TRANSLATION	protein_coding	-	CCDS50150.1	1	487	3	2.115	1.5	35.3	0	-4,-5	-	-	14.256	PRINCIPAL:2
ENSMUSG00000003199	Mpnd	ENSMUST00000124302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003199	Mpnd	ENSMUST00000159996	ENSMUSP00000124644	TRANSLATION	protein_coding	-	-	5	457	3	2.115	0	35.3	0	-4,-5	-	-	14.256	ALTERNATIVE:2
ENSMUSG00000003199	Mpnd	ENSMUST00000153197	ENSMUSP00000125535	TRANSLATION	protein_coding	start/stop	-	3	289	3	2.415	0	32.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000003199	Mpnd	ENSMUST00000159340	ENSMUSP00000125555	TRANSLATION	protein_coding	start	-	5	455	0	1.365	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003199	Mpnd	ENSMUST00000159420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003199	Mpnd	ENSMUST00000133998	ENSMUSP00000122480	TRANSLATION	protein_coding	stop	-	3	171	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071322	Tcp10a	ENSMUST00000138222	ENSMUSP00000115431	TRANSLATION	protein_coding	-	-	5	420	0	5.38	0	270.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071322	Tcp10a	ENSMUST00000128533	ENSMUSP00000114351	TRANSLATION	protein_coding	-	CCDS28377.1	1	438	0	5.38	1.5	270.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071322	Tcp10a	ENSMUST00000147803	ENSMUSP00000120513	TRANSLATION	protein_coding	stop	-	5	6	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071322	Tcp10a	ENSMUST00000095726	ENSMUSP00000093394	TRANSLATION	protein_coding	-	CCDS28377.1	1	438	0	5.38	1.5	270.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071322	Tcp10a	ENSMUST00000129709	ENSMUSP00000114830	TRANSLATION	protein_coding	-	CCDS28377.1	1	438	0	5.38	1.5	270.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071322	Tcp10a	ENSMUST00000140192	ENSMUSP00000117557	TRANSLATION	protein_coding	stop	-	5	401	0	4.38	0	193.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071322	Tcp10a	ENSMUST00000144861	ENSMUSP00000122766	TRANSLATION	protein_coding	stop	-	1	245	0	0.78	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052397	Ezr	ENSMUST00000131131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052397	Ezr	ENSMUST00000064234	ENSMUSP00000063734	TRANSLATION	protein_coding	-	CCDS37428.1	1	586	0	11.5	11.6	479.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032915	Adgre4	ENSMUST00000025004	ENSMUSP00000025004	TRANSLATION	protein_coding	-	CCDS50148.1	1	689	5	4.76	0.5	268.2	0	-1,-4	-	-	17	PRINCIPAL:1
ENSMUSG00000036026	Tmem63b	ENSMUST00000151439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036026	Tmem63b	ENSMUST00000113523	ENSMUSP00000109151	TRANSLATION	protein_coding	-	CCDS28814.1	1	832	0	0	3.9	344.3	10	-2,-4	-	-	7	PRINCIPAL:1
ENSMUSG00000036026	Tmem63b	ENSMUST00000156254	ENSMUSP00000118838	TRANSLATION	protein_coding	stop	-	5	264	0	0	0	0	5	-2,-4	-	-	-1	MINOR
ENSMUSG00000036026	Tmem63b	ENSMUST00000133741	ENSMUSP00000115408	TRANSLATION	protein_coding	stop	-	3	218	0	0	0	0	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000036026	Tmem63b	ENSMUST00000143907	ENSMUSP00000120579	TRANSLATION	protein_coding	stop	-	2	92	0	0	0	0	1	-2,-4	-	-	-1	MINOR
ENSMUSG00000036026	Tmem63b	ENSMUST00000145873	ENSMUSP00000121681	TRANSLATION	protein_coding	stop	-	5	309	0	0	0	47.3	5	-2,-5	-	-	-1	MINOR
ENSMUSG00000036026	Tmem63b	ENSMUST00000129177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036026	Tmem63b	ENSMUST00000127065	ENSMUSP00000118826	TRANSLATION	protein_coding	stop	-	5	200	0	0	0	0	3	-2,-4	-	-	-1	MINOR
ENSMUSG00000036026	Tmem63b	ENSMUST00000131089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067951	Vmn1r227	ENSMUST00000179914	ENSMUSP00000156485	TRANSLATION	protein_coding	-	-	-	311	0	0	0	85.5	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067951	Vmn1r227	ENSMUST00000232943	ENSMUSP00000156554	TRANSLATION	protein_coding	-	-	-	311	0	0	0	85.5	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067951	Vmn1r227	ENSMUST00000233597	ENSMUSP00000156626	TRANSLATION	protein_coding	-	-	-	311	0	0	0	85.5	6	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067951	Vmn1r227	ENSMUST00000088829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067951	Vmn1r227	ENSMUST00000232844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024177	Nme4	ENSMUST00000235157	ENSMUSP00000157963	TRANSLATION	protein_coding	start	-	-	183	11	2.58	0	114.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024177	Nme4	ENSMUST00000236128	ENSMUSP00000158571	TRANSLATION	protein_coding	-	-	-	169	8	3.08	0	65.8	0	-2,2	-	-	6.834	MINOR
ENSMUSG00000024177	Nme4	ENSMUST00000150280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024177	Nme4	ENSMUST00000236112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024177	Nme4	ENSMUST00000025007	ENSMUSP00000025007	TRANSLATION	protein_coding	-	CCDS28544.1	1	186	12	4.33	2.7	182.1	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000024177	Nme4	ENSMUST00000236547	ENSMUSP00000157943	TRANSLATION	protein_coding	-	-	-	203	12	4.08	0	171.8	0	-2,2	-	-	16.884	MINOR
ENSMUSG00000024177	Nme4	ENSMUST00000236967	ENSMUSP00000157701	TRANSLATION	protein_coding	start	-	-	166	11	2.83	0	124.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048992	Prss32	ENSMUST00000233370	ENSMUSP00000156394	TRANSLATION	nonsense_mediated_decay	start	-	-	171	2	3.414	0	133.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048992	Prss32	ENSMUST00000061725	ENSMUSP00000050389	TRANSLATION	protein_coding	-	CCDS37477.1	1	334	5	5.61	1.5	237.5	0	2,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000048992	Prss32	ENSMUST00000154347	ENSMUSP00000116979	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0.85	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000048992	Prss32	ENSMUST00000144925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000141059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034377	Tulp4	ENSMUST00000142030	ENSMUSP00000120358	TRANSLATION	protein_coding	stop	-	5	101	0	0.4	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034377	Tulp4	ENSMUST00000137063	ENSMUSP00000123119	TRANSLATION	protein_coding	start/stop	-	1	673	3	0	0	42.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000034377	Tulp4	ENSMUST00000146758	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000126982	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000039655	ENSMUSP00000049248	TRANSLATION	protein_coding	-	CCDS28370.1	1	1547	4	3.12	3.9	86.2	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000034377	Tulp4	ENSMUST00000149756	ENSMUSP00000123218	TRANSLATION	protein_coding	-	CCDS49934.1	1	1354	4	1.4	1.7	86.2	0	-4,-6	-	-	12.803	MINOR
ENSMUSG00000034377	Tulp4	ENSMUST00000149838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000151732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000152672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000144124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034377	Tulp4	ENSMUST00000145340	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050824	Sstr5	ENSMUST00000051864	ENSMUSP00000051085	TRANSLATION	protein_coding	-	CCDS28520.1	1	362	0	0.8	1.5	209.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000050824	Sstr5	ENSMUST00000165183	ENSMUSP00000128787	TRANSLATION	protein_coding	-	CCDS28520.1	1	362	0	0.8	1.5	209.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079700	Fpr3	ENSMUST00000115565	ENSMUSP00000111227	TRANSLATION	protein_coding	-	CCDS28420.1	-	351	0	0.48	1.7	125.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079700	Fpr3	ENSMUST00000054871	ENSMUSP00000093316	TRANSLATION	protein_coding	-	CCDS28420.1	1	351	0	0.48	1.7	125.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096840	Olfr136	ENSMUST00000216963	ENSMUSP00000149856	TRANSLATION	protein_coding	-	CCDS28781.1	5	312	0	0.36	5.1	163.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096840	Olfr136	ENSMUST00000208525	ENSMUSP00000147166	TRANSLATION	protein_coding	-	CCDS28781.1	5	312	0	0.36	5.1	163.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096840	Olfr136	ENSMUST00000077203	ENSMUSP00000076443	TRANSLATION	protein_coding	-	CCDS28781.1	-	312	0	0.36	5.1	163.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096840	Olfr136	ENSMUST00000208539	ENSMUSP00000146828	TRANSLATION	protein_coding	-	CCDS28781.1	3	312	0	0.36	5.1	163.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096840	Olfr136	ENSMUST00000214035	ENSMUSP00000149871	TRANSLATION	protein_coding	-	CCDS28781.1	5	312	0	0.36	5.1	163.3	5	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000024176	Sox8	ENSMUST00000174560	ENSMUSP00000133742	TRANSLATION	protein_coding	start	-	3	119	0	2	0	82.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024176	Sox8	ENSMUST00000173447	ENSMUSP00000133403	TRANSLATION	protein_coding	-	-	1	221	0	2	0	178.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024176	Sox8	ENSMUST00000025003	ENSMUSP00000025003	TRANSLATION	protein_coding	-	CCDS28521.1	1	464	0	2	2.7	178.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000062859	Tcp11	ENSMUST00000042692	ENSMUSP00000038590	TRANSLATION	protein_coding	-	CCDS37526.1	1	567	0	0	1.5	359.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000062859	Tcp11	ENSMUST00000233615	ENSMUSP00000156943	TRANSLATION	nonsense_mediated_decay	start	-	-	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062859	Tcp11	ENSMUST00000233898	ENSMUSP00000156512	TRANSLATION	protein_coding	-	-	-	454	0	0	0.5	359.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000062859	Tcp11	ENSMUST00000233150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062859	Tcp11	ENSMUST00000129046	ENSMUSP00000116959	TRANSLATION	protein_coding	-	CCDS37526.1	5	567	0	0	1.5	359.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000062859	Tcp11	ENSMUST00000232798	ENSMUSP00000156874	TRANSLATION	protein_coding	-	-	-	447	0	0	0.5	359.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000062859	Tcp11	ENSMUST00000233878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062859	Tcp11	ENSMUST00000233961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062859	Tcp11	ENSMUST00000233009	ENSMUSP00000156820	TRANSLATION	nonsense_mediated_decay	start	-	-	36	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062859	Tcp11	ENSMUST00000043925	ENSMUSP00000046002	TRANSLATION	protein_coding	-	CCDS50045.1	5	488	0	0	1.5	359.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000062859	Tcp11	ENSMUST00000233587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062859	Tcp11	ENSMUST00000233665	ENSMUSP00000156460	TRANSLATION	nonsense_mediated_decay	start	-	-	57	0	0	0	62.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062859	Tcp11	ENSMUST00000123628	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062859	Tcp11	ENSMUST00000232728	ENSMUSP00000156714	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062859	Tcp11	ENSMUST00000114836	ENSMUSP00000110485	TRANSLATION	protein_coding	-	CCDS50045.1	1	488	0	0	1.5	359.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024197	Plin3	ENSMUST00000233070	ENSMUSP00000156720	TRANSLATION	protein_coding	stop	-	-	134	0	0	0	191.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024197	Plin3	ENSMUST00000019726	ENSMUSP00000019726	TRANSLATION	protein_coding	-	CCDS28901.1	1	437	0	3.8	2.7	545.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000115113	Smim40-ps	ENSMUST00000226885	ENSMUSP00000154467	TRANSLATION	protein_coding	-	-	-	81	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000080990	Olfr118	ENSMUST00000216551	ENSMUSP00000151212	TRANSLATION	protein_coding	-	CCDS28760.1	5	321	0	0.42	1.5	193.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000080990	Olfr118	ENSMUST00000122036	ENSMUSP00000113988	TRANSLATION	protein_coding	-	CCDS28760.1	-	321	0	0.42	1.5	193.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000080990	Olfr118	ENSMUST00000215811	ENSMUSP00000150176	TRANSLATION	protein_coding	-	CCDS28760.1	5	321	0	0.42	1.5	193.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002308	Cd320	ENSMUST00000002379	ENSMUSP00000002379	TRANSLATION	protein_coding	-	CCDS28632.1	1	260	12	2	0.5	85.4	2	4,2	-	-	18	PRINCIPAL:3
ENSMUSG00000002308	Cd320	ENSMUST00000087559	ENSMUSP00000084839	TRANSLATION	protein_coding	-	CCDS79533.1	1	246	12	2	0.5	85.4	2	0,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000002308	Cd320	ENSMUST00000234506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002308	Cd320	ENSMUST00000173418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062078	Qk	ENSMUST00000232721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062078	Qk	ENSMUST00000233684	ENSMUSP00000156519	TRANSLATION	protein_coding	start/stop	-	-	217	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062078	Qk	ENSMUST00000233828	ENSMUSP00000156665	TRANSLATION	protein_coding	-	-	-	319	3	5.5	13.3	120.3	0	-4,-5	-	-	14.356	MINOR
ENSMUSG00000062078	Qk	ENSMUST00000042296	ENSMUSP00000046740	TRANSLATION	protein_coding	-	CCDS28387.1	1	325	3	5.5	7.6	120.3	0	-4,-5	-	-	12.64	MINOR
ENSMUSG00000062078	Qk	ENSMUST00000097414	ENSMUSP00000095025	TRANSLATION	nonsense_mediated_decay	-	-	1	319	3	5.5	13.3	120.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062078	Qk	ENSMUST00000233645	ENSMUSP00000156511	TRANSLATION	protein_coding	-	CCDS49947.1	-	341	3	5.5	14.3	192.7	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024044	Epb41l3	ENSMUST00000232706	ENSMUSP00000156921	TRANSLATION	protein_coding	-	-	-	812	0	7.14	0.5	474.9	0	-4,-5	-	-	6.684	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000225740	ENSMUSP00000153198	TRANSLATION	nonsense_mediated_decay	-	-	-	287	0	4.31	0	114.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000223703	ENSMUSP00000153611	TRANSLATION	protein_coding	start	-	-	852	0	4.16	0	427.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000223610	ENSMUSP00000153195	TRANSLATION	protein_coding	stop	-	-	53	0	1.58	0	56.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000223565	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024044	Epb41l3	ENSMUST00000225604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024044	Epb41l3	ENSMUST00000223816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024044	Epb41l3	ENSMUST00000233509	ENSMUSP00000156566	TRANSLATION	protein_coding	-	-	-	911	0	7.14	0.5	561.9	0	-4,-5	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000024044	Epb41l3	ENSMUST00000238898	ENSMUSP00000158929	TRANSLATION	protein_coding	-	-	-	1052	0	3.98	0	467.5	0	-4,-5	-	-	0.24	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000224951	ENSMUSP00000153190	TRANSLATION	protein_coding	start/stop	-	-	262	0	0	0	87.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000233964	ENSMUSP00000156827	TRANSLATION	protein_coding	start	-	-	819	0	7.14	0	503.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000225977	ENSMUSP00000153228	TRANSLATION	protein_coding	-	-	-	876	0	7.14	0.5	562.2	0	-4,-5	-	-	11.922	ALTERNATIVE:2
ENSMUSG00000024044	Epb41l3	ENSMUST00000225062	ENSMUSP00000153146	TRANSLATION	protein_coding	stop	-	-	29	0	0.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000225695	ENSMUSP00000153138	TRANSLATION	protein_coding	start/stop	-	-	223	0	0	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000112680	ENSMUSP00000108300	TRANSLATION	protein_coding	-	-	5	939	0	7.14	0	563.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024044	Epb41l3	ENSMUST00000225209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024044	Epb41l3	ENSMUST00000080208	ENSMUSP00000079098	TRANSLATION	protein_coding	-	CCDS28952.1	1	929	0	7.14	0.5	561.9	0	-4,-5	-	-	11.904	PRINCIPAL:2
ENSMUSG00000024044	Epb41l3	ENSMUST00000239167	ENSMUSP00000158911	TRANSLATION	protein_coding	-	-	-	951	0	7.14	0	561.9	0	-3,-4	-	-	11.904	ALTERNATIVE:2
ENSMUSG00000024044	Epb41l3	ENSMUST00000224523	ENSMUSP00000153133	TRANSLATION	protein_coding	start	-	-	605	0	2.5	0	417.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024044	Epb41l3	ENSMUST00000225316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023067	Cdkn1a	ENSMUST00000122348	ENSMUSP00000112411	TRANSLATION	protein_coding	-	CCDS28591.1	1	159	0	0.4	0.5	70.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023067	Cdkn1a	ENSMUST00000023829	ENSMUSP00000023829	TRANSLATION	protein_coding	-	CCDS28591.1	1	159	0	0.4	0.5	70.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023067	Cdkn1a	ENSMUST00000119901	ENSMUSP00000113150	TRANSLATION	protein_coding	-	CCDS28591.1	2	159	0	0.4	0.5	70.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023067	Cdkn1a	ENSMUST00000232979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023067	Cdkn1a	ENSMUST00000233296	ENSMUSP00000156559	TRANSLATION	protein_coding	-	CCDS28591.1	-	159	0	0.4	0.5	70.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023806	Rsph3b	ENSMUST00000024572	ENSMUSP00000024572	TRANSLATION	protein_coding	-	CCDS57044.1	1	389	0	0	0.5	424.7	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000023806	Rsph3b	ENSMUST00000231794	ENSMUSP00000156248	TRANSLATION	protein_coding	-	-	-	534	0	0	0	424.7	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000023806	Rsph3b	ENSMUST00000232602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040888	Gfer	ENSMUST00000234811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040888	Gfer	ENSMUST00000234520	ENSMUSP00000157116	TRANSLATION	nonsense_mediated_decay	-	-	-	198	23	3.08	1.5	99	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040888	Gfer	ENSMUST00000234197	ENSMUSP00000157329	TRANSLATION	nonsense_mediated_decay	-	-	-	198	23	3.08	1.5	99	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040888	Gfer	ENSMUST00000234235	ENSMUSP00000157249	TRANSLATION	protein_coding	-	-	-	187	23	2.75	0.5	99	0	-4,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000040888	Gfer	ENSMUST00000046839	ENSMUSP00000049186	TRANSLATION	protein_coding	-	CCDS28492.1	1	198	23	3.08	1.5	99	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000040888	Gfer	ENSMUST00000234859	ENSMUSP00000157365	TRANSLATION	protein_coding	-	-	-	77	16	1.75	0	68.5	0	-4,-5	-	-	8.826	MINOR
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000167059	ENSMUSP00000131574	TRANSLATION	protein_coding	-	CCDS50011.1	2	94	0	1.4	0.5	137.3	2	1,-3	-	-	3.504	MINOR
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000233040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000024698	ENSMUSP00000024698	TRANSLATION	protein_coding	-	CCDS28456.1	1	129	9	2.4	1.5	237.2	2	3,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000233814	ENSMUSP00000156786	TRANSLATION	protein_coding	-	-	-	83	7	1.4	0	85.4	0	3,-2	-	-	8.166	MINOR
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000233428	ENSMUSP00000156767	TRANSLATION	protein_coding	-	-	-	139	0	0.4	0	39.6	0	2,-2	-	-	1.002	MINOR
ENSMUSG00000023905	Tnfrsf12a	ENSMUST00000233754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079563	Pglyrp2	ENSMUST00000236703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079563	Pglyrp2	ENSMUST00000114455	ENSMUSP00000110099	TRANSLATION	protein_coding	-	-	1	518	1	0.64	0.5	0	0	3,-2	-	-	2.949	MINOR
ENSMUSG00000079563	Pglyrp2	ENSMUST00000170392	ENSMUSP00000129964	TRANSLATION	protein_coding	-	CCDS37557.1	1	530	3	1.97	0.5	48.6	0	3,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000079563	Pglyrp2	ENSMUST00000235892	ENSMUSP00000158250	TRANSLATION	protein_coding	-	-	-	480	3	1.97	0	48.6	0	3,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000079563	Pglyrp2	ENSMUST00000237082	ENSMUSP00000157928	TRANSLATION	nonsense_mediated_decay	-	-	-	388	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000079563	Pglyrp2	ENSMUST00000237165	ENSMUSP00000157711	TRANSLATION	protein_coding	-	-	-	415	0	0	0.5	0	0	3,-2	-	-	0	MINOR
ENSMUSG00000079563	Pglyrp2	ENSMUST00000237130	ENSMUSP00000157771	TRANSLATION	protein_coding	-	-	-	450	1	0.97	0.5	0	0	3,-2	-	-	3.951	MINOR
ENSMUSG00000079563	Pglyrp2	ENSMUST00000236386	ENSMUSP00000158365	TRANSLATION	protein_coding	-	CCDS37557.1	-	530	3	1.97	0.5	48.6	0	3,-2	-	-	15	PRINCIPAL:2
ENSMUSG00000024334	H2-Oa	ENSMUST00000025192	ENSMUSP00000025192	TRANSLATION	protein_coding	-	CCDS37577.1	1	250	0	2.35	5.1	184.5	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024334	H2-Oa	ENSMUST00000236684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024334	H2-Oa	ENSMUST00000174670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048905	Bnip5	ENSMUST00000062357	ENSMUSP00000050646	TRANSLATION	protein_coding	-	CCDS28586.1	1	669	0	0	0.5	949.3	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048905	Bnip5	ENSMUST00000228025	ENSMUSP00000154383	TRANSLATION	protein_coding	start/stop	-	-	133	0	0	0	152.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037089	Slc35b2	ENSMUST00000224341	ENSMUSP00000153676	TRANSLATION	protein_coding	start	-	-	69	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037089	Slc35b2	ENSMUST00000226086	ENSMUSP00000153497	TRANSLATION	protein_coding	-	-	-	124	0	0	0	0	2	2,-3	-	-	0	MINOR
ENSMUSG00000037089	Slc35b2	ENSMUST00000224559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037089	Slc35b2	ENSMUST00000041353	ENSMUSP00000037834	TRANSLATION	protein_coding	-	CCDS37630.1	1	382	0	0	2.9	256.7	7	-4,-7	-	-	6.876	MINOR
ENSMUSG00000037089	Slc35b2	ENSMUST00000225226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037089	Slc35b2	ENSMUST00000224905	ENSMUSP00000153367	TRANSLATION	protein_coding	-	-	-	431	0	0	7.5	256.7	9	2,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000037089	Slc35b2	ENSMUST00000223987	ENSMUSP00000153631	TRANSLATION	protein_coding	-	CCDS37630.1	-	382	0	0	2.9	256.7	7	-4,-7	-	-	6.876	MINOR
ENSMUSG00000037089	Slc35b2	ENSMUST00000233139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079507	H2-Q1	ENSMUST00000073208	ENSMUSP00000072942	TRANSLATION	protein_coding	-	CCDS50086.1	1	368	0	4.431	0.5	390.1	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000079507	H2-Q1	ENSMUST00000172994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079507	H2-Q1	ENSMUST00000105041	ENSMUSP00000100662	TRANSLATION	protein_coding	-	-	1	341	0	3.9	0	348.1	1	2,-3	-	-	8.418	MINOR
ENSMUSG00000040828	Catsperd	ENSMUST00000232838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040828	Catsperd	ENSMUST00000112979	ENSMUSP00000108603	TRANSLATION	protein_coding	-	CCDS50153.1	1	805	0	0	0.5	1227.9	1	4,2	-	-	6	PRINCIPAL:1
ENSMUSG00000040828	Catsperd	ENSMUST00000233947	ENSMUSP00000156886	TRANSLATION	protein_coding	start	-	-	505	0	0	0	630.9	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000025727	A930017K11Rik	ENSMUST00000162431	ENSMUSP00000125106	TRANSLATION	protein_coding	-	-	1	571	3	0	1	122	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000002769	Gnmt	ENSMUST00000002846	ENSMUSP00000002846	TRANSLATION	protein_coding	-	CCDS28838.1	1	293	20	6	10.4	52.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000002769	Gnmt	ENSMUST00000233086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002769	Gnmt	ENSMUST00000147112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002831	Plin4	ENSMUST00000190703	ENSMUSP00000139859	TRANSLATION	protein_coding	-	CCDS79565.1	1	1403	0	1.25	0.5	70.7	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000002831	Plin4	ENSMUST00000002908	ENSMUSP00000002908	TRANSLATION	protein_coding	-	-	5	1403	0	1.25	0.5	70.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000002831	Plin4	ENSMUST00000238734	ENSMUSP00000158677	TRANSLATION	protein_coding	-	-	-	1601	0	1.25	0.5	70.7	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000073411	H2-D1	ENSMUST00000172785	ENSMUSP00000134570	TRANSLATION	protein_coding	-	CCDS57074.1	1	362	4	5.58	0.5	383.8	2	4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000073411	H2-D1	ENSMUST00000172503	ENSMUSP00000134582	TRANSLATION	protein_coding	-	-	3	380	4	5.58	0	383.8	2	4,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000073411	H2-D1	ENSMUST00000174325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032937	Fshr	ENSMUST00000035701	ENSMUSP00000040477	TRANSLATION	protein_coding	-	CCDS29026.1	1	692	0	7.65	2.7	241.7	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037246	H2-M10.5	ENSMUST00000041531	ENSMUSP00000047766	TRANSLATION	protein_coding	-	CCDS28725.1	1	330	0	3.79	0.5	202.3	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000061232	H2-K1	ENSMUST00000172912	ENSMUSP00000134004	TRANSLATION	protein_coding	-	CCDS84295.1	1	360	4	8.33	0.5	390.1	2	3,-1	-	-	15.34	ALTERNATIVE:2
ENSMUSG00000061232	H2-K1	ENSMUST00000236757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000173543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000238098	ENSMUSP00000157920	TRANSLATION	protein_coding	start/stop	-	-	355	4	8.16	0	339.2	2	3,-2	-	-	-1	MINOR
ENSMUSG00000061232	H2-K1	ENSMUST00000114311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000236740	ENSMUSP00000158220	TRANSLATION	protein_coding	-	-	-	356	4	8.16	0	368.3	2	3,-1	-	-	13.69	MINOR
ENSMUSG00000061232	H2-K1	ENSMUST00000173317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000235463	ENSMUSP00000157649	TRANSLATION	protein_coding	start	-	-	190	3	5.41	0	79.2	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000061232	H2-K1	ENSMUST00000087189	ENSMUSP00000084436	TRANSLATION	protein_coding	-	-	1	187	0	5.41	0	79.2	2	4,-1	-	-	0	MINOR
ENSMUSG00000061232	H2-K1	ENSMUST00000236877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000025181	ENSMUSP00000025181	TRANSLATION	protein_coding	-	CCDS50069.1	1	369	4	8.66	0.5	390.1	2	3,-1	-	-	16	PRINCIPAL:3
ENSMUSG00000061232	H2-K1	ENSMUST00000238021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000173602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061232	H2-K1	ENSMUST00000172782	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061232	H2-K1	ENSMUST00000236469	ENSMUSP00000157631	TRANSLATION	protein_coding	start	-	-	130	0	3.58	0	38.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000061232	H2-K1	ENSMUST00000173075	ENSMUSP00000133847	TRANSLATION	protein_coding	stop	-	3	289	4	5.75	0	349.7	0	3,-3	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234852	ENSMUSP00000157184	TRANSLATION	protein_coding	-	-	-	804	4	3.686	0	383	15	4,-1	-	-	13	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234908	ENSMUSP00000156999	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234476	ENSMUSP00000157076	TRANSLATION	protein_coding	-	-	-	636	4	3.326	0	345.5	15	4,-1	-	-	10.03	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234400	ENSMUSP00000157041	TRANSLATION	nonsense_mediated_decay	-	-	-	82	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234162	ENSMUSP00000157015	TRANSLATION	protein_coding	-	-	-	376	0	2.506	0	72.3	0	4,-1	-	-	2.442	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000165781	ENSMUSP00000129296	TRANSLATION	protein_coding	-	CCDS50161.1	5	856	4	4.016	0.5	413	15	4,-1	-	-	15.46	PRINCIPAL:2
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234917	ENSMUSP00000157151	TRANSLATION	nonsense_mediated_decay	-	-	-	67	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234443	ENSMUSP00000157057	TRANSLATION	protein_coding	-	-	-	880	4	4.286	0	397	15	4,-1	-	-	15.04	ALTERNATIVE:2
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234578	ENSMUSP00000157164	TRANSLATION	protein_coding	-	-	-	520	0	2.596	0	139.8	0	4,-1	-	-	2.622	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234878	ENSMUSP00000157258	TRANSLATION	nonsense_mediated_decay	-	-	-	86	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234883	ENSMUSP00000157042	TRANSLATION	protein_coding	-	-	-	712	4	3.926	0	345.5	15	4,-1	-	-	11.23	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234401	ENSMUSP00000156988	TRANSLATION	protein_coding	-	-	-	612	4	3.056	0	357.9	15	4,-1	-	-	10.234	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234299	ENSMUSP00000157246	TRANSLATION	nonsense_mediated_decay	-	-	-	52	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234508	ENSMUSP00000157163	TRANSLATION	protein_coding	-	-	-	688	4	3.656	0	357.9	15	4,-1	-	-	11.434	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234642	ENSMUSP00000157051	TRANSLATION	nonsense_mediated_decay	-	-	-	47	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090655	Vmn2r120	ENSMUST00000234962	ENSMUSP00000157106	TRANSLATION	nonsense_mediated_decay	-	-	-	70	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091945	Vmn2r114	ENSMUST00000168033	ENSMUSP00000127505	TRANSLATION	protein_coding	-	CCDS50007.1	1	856	4	2.62	1.5	360.7	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000091945	Vmn2r114	ENSMUST00000234051	ENSMUSP00000157104	TRANSLATION	nonsense_mediated_decay	-	-	-	577	0	1.34	0	104.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091945	Vmn2r114	ENSMUST00000234493	ENSMUSP00000157375	TRANSLATION	nonsense_mediated_decay	-	-	-	577	0	1.34	0	104.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091945	Vmn2r114	ENSMUST00000234738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055202	Zfp811	ENSMUST00000234594	ENSMUSP00000157159	TRANSLATION	protein_coding	-	-	-	64	0	1	0.5	82.2	0	-4,-5	-	-	4.284	MINOR
ENSMUSG00000055202	Zfp811	ENSMUST00000200914	ENSMUSP00000144038	TRANSLATION	protein_coding	-	CCDS79528.1	1	552	50	1.4	0.5	293.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000055202	Zfp811	ENSMUST00000080905	ENSMUSP00000079709	TRANSLATION	protein_coding	start	-	5	551	50	1.4	0.5	293.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000090675	Olfr111	ENSMUST00000215424	ENSMUSP00000150806	TRANSLATION	protein_coding	-	CCDS28755.1	5	317	0	0.42	3.9	181.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000090675	Olfr111	ENSMUST00000097325	ENSMUSP00000094933	TRANSLATION	protein_coding	-	CCDS28755.1	-	317	0	0.42	3.9	181.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000090675	Olfr111	ENSMUST00000214259	ENSMUSP00000150585	TRANSLATION	protein_coding	-	CCDS28755.1	5	317	0	0.42	3.9	181.9	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000024181	Mrpl28	ENSMUST00000123132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024181	Mrpl28	ENSMUST00000236040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024181	Mrpl28	ENSMUST00000237950	ENSMUSP00000158366	TRANSLATION	nonsense_mediated_decay	-	-	-	177	0	2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024181	Mrpl28	ENSMUST00000025014	ENSMUSP00000025014	TRANSLATION	protein_coding	-	CCDS37509.1	1	257	0	5.49	7.6	0	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000024181	Mrpl28	ENSMUST00000127647	ENSMUSP00000115369	TRANSLATION	protein_coding	-	-	3	198	0	3.25	0	0	0	-4,0	-	-	1.518	MINOR
ENSMUSG00000024181	Mrpl28	ENSMUST00000236166	ENSMUSP00000158545	TRANSLATION	protein_coding	-	-	-	250	0	5.16	0	0	0	-4,0	-	-	5.34	MINOR
ENSMUSG00000044501	Zfp758	ENSMUST00000088765	ENSMUSP00000086143	TRANSLATION	protein_coding	-	CCDS37470.1	1	551	51	1.6	0.5	318.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000044501	Zfp758	ENSMUST00000121315	ENSMUSP00000113532	TRANSLATION	protein_coding	-	CCDS37470.1	1	551	51	1.6	0.5	318.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000044501	Zfp758	ENSMUST00000072477	ENSMUSP00000072298	TRANSLATION	protein_coding	stop	-	1	542	51	1.6	0	318.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044501	Zfp758	ENSMUST00000149699	ENSMUSP00000121288	TRANSLATION	protein_coding	-	CCDS84277.1	1	583	51	1.6	0.5	318.9	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234872	ENSMUSP00000157380	TRANSLATION	nonsense_mediated_decay	-	-	-	81	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090966	Vmn2r116	ENSMUST00000235122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234055	ENSMUSP00000157330	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234010	ENSMUSP00000157271	TRANSLATION	protein_coding	-	-	-	780	4	3.16	0	365.8	7	4,-1	-	-	13.288	MINOR
ENSMUSG00000090966	Vmn2r116	ENSMUST00000164856	ENSMUSP00000128106	TRANSLATION	protein_coding	-	CCDS50009.1	1	856	4	4.24	0.5	375	7	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234839	ENSMUSP00000157298	TRANSLATION	nonsense_mediated_decay	-	-	-	69	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000090966	Vmn2r116	ENSMUST00000234564	ENSMUSP00000157066	TRANSLATION	protein_coding	-	-	-	816	4	3.64	0	365.3	7	4,-1	-	-	14.218	MINOR
ENSMUSG00000024325	Ring1	ENSMUST00000174054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024325	Ring1	ENSMUST00000025183	ENSMUSP00000025183	TRANSLATION	protein_coding	-	CCDS50070.1	1	406	8	4.03	7.5	156.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024325	Ring1	ENSMUST00000172739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073400	Trim10	ENSMUST00000060524	ENSMUSP00000057928	TRANSLATION	protein_coding	-	CCDS37614.1	1	489	16	3.928	2.7	192.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043557	Mdga1	ENSMUST00000234114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043557	Mdga1	ENSMUST00000167102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043557	Mdga1	ENSMUST00000234251	ENSMUSP00000157199	TRANSLATION	protein_coding	start/stop	-	-	159	0	1.52	0	96.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043557	Mdga1	ENSMUST00000165211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043557	Mdga1	ENSMUST00000168044	ENSMUSP00000126571	TRANSLATION	protein_coding	start	-	3	187	0	2.12	0	135.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043557	Mdga1	ENSMUST00000165528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043557	Mdga1	ENSMUST00000073556	ENSMUSP00000073246	TRANSLATION	protein_coding	-	CCDS37540.1	5	948	0	7.7	0.5	376.6	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000043557	Mdga1	ENSMUST00000170786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043557	Mdga1	ENSMUST00000171691	ENSMUSP00000126529	TRANSLATION	protein_coding	-	-	5	956	0	7.7	3.9	376.6	0	3,-2	-	-	13	ALTERNATIVE:2
ENSMUSG00000043557	Mdga1	ENSMUST00000167190	ENSMUSP00000130395	TRANSLATION	nonsense_mediated_decay	-	-	5	942	0	4.28	0	206.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000101959	Ldhal6b	ENSMUST00000189788	ENSMUSP00000139572	TRANSLATION	protein_coding	-	CCDS79501.1	-	382	26	1	1.5	225.6	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000038677	Scube3	ENSMUST00000232984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038677	Scube3	ENSMUST00000132670	ENSMUSP00000117490	TRANSLATION	protein_coding	-	-	1	911	42	7.94	0.5	380.1	0	3,-2	-	-	15.3	MINOR
ENSMUSG00000038677	Scube3	ENSMUST00000148342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038677	Scube3	ENSMUST00000142170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038677	Scube3	ENSMUST00000043503	ENSMUSP00000038366	TRANSLATION	protein_coding	-	CCDS37527.1	1	993	42	7.94	7.5	425.1	0	3,-2	-	-	21	PRINCIPAL:2
ENSMUSG00000038677	Scube3	ENSMUST00000137147	ENSMUSP00000156515	TRANSLATION	protein_coding	-	-	5	1009	42	7.94	6.5	425.1	0	3,-2	-	-	20.538	ALTERNATIVE:1
ENSMUSG00000038677	Scube3	ENSMUST00000233905	ENSMUSP00000156885	TRANSLATION	protein_coding	-	-	-	992	42	7.94	7.5	425.1	0	3,-2	-	-	21	ALTERNATIVE:1
ENSMUSG00000002668	Dennd1c	ENSMUST00000233564	ENSMUSP00000156614	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002668	Dennd1c	ENSMUST00000232938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002668	Dennd1c	ENSMUST00000233234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002668	Dennd1c	ENSMUST00000011623	ENSMUSP00000011623	TRANSLATION	protein_coding	-	CCDS37669.1	1	786	0	9.845	0.5	219.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002668	Dennd1c	ENSMUST00000233674	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002668	Dennd1c	ENSMUST00000233650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002668	Dennd1c	ENSMUST00000232685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036636	Clcn7	ENSMUST00000159773	ENSMUSP00000125546	TRANSLATION	protein_coding	start/stop	-	5	202	0	3.951	0	109.5	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000036636	Clcn7	ENSMUST00000160961	ENSMUSP00000124194	TRANSLATION	protein_coding	-	CCDS84282.1	1	783	0	10.329	1.5	375.5	11	-4,-5	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000036636	Clcn7	ENSMUST00000159426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036636	Clcn7	ENSMUST00000233633	ENSMUSP00000156968	TRANSLATION	nonsense_mediated_decay	-	-	-	391	0	5.279	0	163.7	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000036636	Clcn7	ENSMUST00000162722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036636	Clcn7	ENSMUST00000162862	ENSMUSP00000124527	TRANSLATION	protein_coding	-	-	5	860	0	10.329	0	374.1	11	-4,-5	-	-	11.916	ALTERNATIVE:2
ENSMUSG00000036636	Clcn7	ENSMUST00000040729	ENSMUSP00000035964	TRANSLATION	protein_coding	-	CCDS28509.1	1	803	0	10.329	3.9	375.5	11	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000024338	Psmb8	ENSMUST00000236557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024338	Psmb8	ENSMUST00000237106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024338	Psmb8	ENSMUST00000236331	ENSMUSP00000158017	TRANSLATION	protein_coding	start	-	-	93	2	2.33	0	60	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024338	Psmb8	ENSMUST00000173441	ENSMUSP00000134664	TRANSLATION	protein_coding	stop	-	5	256	8	4.53	0	163.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024338	Psmb8	ENSMUST00000238071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024338	Psmb8	ENSMUST00000172960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024338	Psmb8	ENSMUST00000025196	ENSMUSP00000025196	TRANSLATION	protein_coding	-	CCDS50073.1	1	276	8	5.36	7.5	163.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024043	Arhgap28	ENSMUST00000163865	ENSMUSP00000130960	TRANSLATION	protein_coding	-	CCDS84329.1	5	678	0	4.11	0.5	122.1	0	-4,-6	-	-	11.544	ALTERNATIVE:2
ENSMUSG00000024043	Arhgap28	ENSMUST00000170581	ENSMUSP00000131903	TRANSLATION	protein_coding	start/stop	-	5	235	0	1.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024043	Arhgap28	ENSMUST00000170813	ENSMUSP00000132087	TRANSLATION	nonsense_mediated_decay	start	-	5	208	0	2.81	0	82.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024043	Arhgap28	ENSMUST00000164647	ENSMUSP00000128194	TRANSLATION	protein_coding	-	-	5	679	0	4.11	0.5	129.7	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000024043	Arhgap28	ENSMUST00000024840	ENSMUSP00000024840	TRANSLATION	protein_coding	-	CCDS28950.1	1	729	0	4.11	0.5	129.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000011589	Fsd1	ENSMUST00000233361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011589	Fsd1	ENSMUST00000233973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011589	Fsd1	ENSMUST00000011733	ENSMUSP00000011733	TRANSLATION	protein_coding	-	CCDS37661.1	1	496	0	2.86	7.8	65.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000011589	Fsd1	ENSMUST00000233772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011589	Fsd1	ENSMUST00000232915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011589	Fsd1	ENSMUST00000233149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036196	Slc26a8	ENSMUST00000233689	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036196	Slc26a8	ENSMUST00000233398	ENSMUSP00000156774	TRANSLATION	protein_coding	-	-	-	430	0	2.6	0	186.7	11	-4,-2	-	-	1.548	MINOR
ENSMUSG00000036196	Slc26a8	ENSMUST00000114764	ENSMUSP00000110412	TRANSLATION	protein_coding	-	CCDS70779.1	5	999	0	4.827	0.5	287.8	13	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000036196	Slc26a8	ENSMUST00000232805	ENSMUSP00000156677	TRANSLATION	protein_coding	start	-	-	252	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036196	Slc26a8	ENSMUST00000233213	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036196	Slc26a8	ENSMUST00000233249	ENSMUSP00000156769	TRANSLATION	protein_coding	-	-	-	894	0	4.482	0	233.1	9	-4,-2	-	-	8.028	MINOR
ENSMUSG00000036196	Slc26a8	ENSMUST00000233903	ENSMUSP00000156642	TRANSLATION	nonsense_mediated_decay	-	-	-	67	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036196	Slc26a8	ENSMUST00000145224	ENSMUSP00000156853	TRANSLATION	protein_coding	-	-	2	521	0	2.777	0	232.9	13	-4,-2	-	-	4.608	MINOR
ENSMUSG00000024026	Glo1	ENSMUST00000235873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024026	Glo1	ENSMUST00000236995	ENSMUSP00000158067	TRANSLATION	nonsense_mediated_decay	-	-	-	136	0	3.778	0	37.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024026	Glo1	ENSMUST00000237063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024026	Glo1	ENSMUST00000235171	ENSMUSP00000158475	TRANSLATION	protein_coding	-	-	-	151	0	2.83	0	29.2	0	-4,-5	-	-	3.438	MINOR
ENSMUSG00000024026	Glo1	ENSMUST00000167624	ENSMUSP00000126586	TRANSLATION	protein_coding	-	CCDS28600.1	2	184	2	5.16	13	83.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024026	Glo1	ENSMUST00000236335	ENSMUSP00000158296	TRANSLATION	protein_coding	-	CCDS28600.1	-	184	2	5.16	13	83.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024026	Glo1	ENSMUST00000237343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024026	Glo1	ENSMUST00000236619	ENSMUSP00000157517	TRANSLATION	nonsense_mediated_decay	-	-	-	109	0	1.5	0	21.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024026	Glo1	ENSMUST00000235547	ENSMUSP00000157858	TRANSLATION	protein_coding	-	CCDS28600.1	-	184	2	5.16	13	83.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024026	Glo1	ENSMUST00000024823	ENSMUSP00000024823	TRANSLATION	nonsense_mediated_decay	-	-	1	109	0	1.5	0	21.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061544	Zfp229	ENSMUST00000182827	ENSMUSP00000138478	TRANSLATION	protein_coding	stop	-	5	90	0	1	0	88.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061544	Zfp229	ENSMUST00000065871	ENSMUSP00000065379	TRANSLATION	protein_coding	-	CCDS49995.1	3	705	68	1.4	0.5	390.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061544	Zfp229	ENSMUST00000182334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061544	Zfp229	ENSMUST00000182603	ENSMUSP00000138107	TRANSLATION	protein_coding	-	CCDS49995.1	1	705	68	1.4	0.5	390.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000061544	Zfp229	ENSMUST00000182923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061544	Zfp229	ENSMUST00000183192	ENSMUSP00000138265	TRANSLATION	protein_coding	-	-	1	88	0	1	0	88.8	0	-4,-6	-	-	4.284	MINOR
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000146711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000118384	ENSMUSP00000113511	TRANSLATION	protein_coding	-	-	2	93	0	1.35	0	82.8	0	-4,-6	-	-	7.422	MINOR
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000142415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000068261	ENSMUSP00000069482	TRANSLATION	protein_coding	-	CCDS37597.1	1	118	0	2.1	11.7	123.4	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000143289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024403	Atp6v1g2	ENSMUST00000130992	ENSMUSP00000134733	TRANSLATION	protein_coding	-	CCDS84301.1	2	77	0	0.85	6.3	60.1	0	-4,-5	-	-	6.117	MINOR
ENSMUSG00000046196	Ttc39d	ENSMUST00000134652	ENSMUSP00000123158	TRANSLATION	protein_coding	-	CCDS50187.1	3	604	0	0	1.5	489.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046196	Ttc39d	ENSMUST00000053168	ENSMUSP00000053781	TRANSLATION	protein_coding	-	CCDS50187.1	-	604	0	0	1.5	489.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000004730	Adgre1	ENSMUST00000086763	ENSMUSP00000083971	TRANSLATION	protein_coding	-	CCDS50160.1	1	931	45	8.5	1.5	513.1	7	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000004730	Adgre1	ENSMUST00000004850	ENSMUSP00000004850	TRANSLATION	protein_coding	-	CCDS50160.1	1	931	45	8.5	1.5	513.1	7	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000004730	Adgre1	ENSMUST00000232808	ENSMUSP00000156744	TRANSLATION	protein_coding	stop	-	-	125	14	1.24	0	87.8	0	4,-2	-	-	-1	MINOR
ENSMUSG00000004730	Adgre1	ENSMUST00000233376	ENSMUSP00000156948	TRANSLATION	protein_coding	stop	-	-	104	13	1.54	0	56.8	0	1,-3	-	-	-1	MINOR
ENSMUSG00000004730	Adgre1	ENSMUST00000233840	ENSMUSP00000156743	TRANSLATION	protein_coding	stop	-	-	296	30	4.29	0	189.6	0	1,-3	-	-	-1	MINOR
ENSMUSG00000073468	Sft2d1	ENSMUST00000128087	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073468	Sft2d1	ENSMUST00000154553	ENSMUSP00000117294	TRANSLATION	protein_coding	-	CCDS49945.1	1	159	0	0	17.3	130.6	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000073468	Sft2d1	ENSMUST00000135627	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073468	Sft2d1	ENSMUST00000135964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073468	Sft2d1	ENSMUST00000130782	ENSMUSP00000115640	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073468	Sft2d1	ENSMUST00000150728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073468	Sft2d1	ENSMUST00000145276	ENSMUSP00000115979	TRANSLATION	nonsense_mediated_decay	-	-	1	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073468	Sft2d1	ENSMUST00000141213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073468	Sft2d1	ENSMUST00000153406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024050	Wiz	ENSMUST00000172216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024050	Wiz	ENSMUST00000171728	ENSMUSP00000130054	TRANSLATION	nonsense_mediated_decay	-	-	5	119	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000087703	ENSMUSP00000084993	TRANSLATION	protein_coding	-	CCDS28616.1	1	955	14	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000163107	ENSMUSP00000127943	TRANSLATION	nonsense_mediated_decay	-	-	1	88	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000169488	ENSMUSP00000126253	TRANSLATION	protein_coding	-	-	5	1059	11	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000238144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024050	Wiz	ENSMUST00000170603	ENSMUSP00000128241	TRANSLATION	protein_coding	stop	-	3	62	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000169280	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024050	Wiz	ENSMUST00000170617	ENSMUSP00000130517	TRANSLATION	nonsense_mediated_decay	-	-	5	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000165912	ENSMUSP00000127651	TRANSLATION	protein_coding	stop	-	3	189	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000087699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024050	Wiz	ENSMUST00000064694	ENSMUSP00000069443	TRANSLATION	protein_coding	-	CCDS28617.2	1	956	14	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024050	Wiz	ENSMUST00000169741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024050	Wiz	ENSMUST00000236409	ENSMUSP00000158082	TRANSLATION	protein_coding	-	-	-	1685	33	0	0	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000002372	Ranbp3	ENSMUST00000233305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002372	Ranbp3	ENSMUST00000002445	ENSMUSP00000002445	TRANSLATION	protein_coding	-	CCDS28911.1	1	491	0	4	0.5	50.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002372	Ranbp3	ENSMUST00000233029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002372	Ranbp3	ENSMUST00000233727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002372	Ranbp3	ENSMUST00000232975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002372	Ranbp3	ENSMUST00000233319	ENSMUSP00000156588	TRANSLATION	protein_coding	-	-	-	558	0	4	0.5	50.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002372	Ranbp3	ENSMUST00000232922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002372	Ranbp3	ENSMUST00000233617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019578	Ubxn6	ENSMUST00000134441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019578	Ubxn6	ENSMUST00000139371	ENSMUSP00000120423	TRANSLATION	protein_coding	stop	-	3	154	2	0	0	43.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000019578	Ubxn6	ENSMUST00000146467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019578	Ubxn6	ENSMUST00000153947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019578	Ubxn6	ENSMUST00000019722	ENSMUSP00000019722	TRANSLATION	protein_coding	-	CCDS28893.1	1	442	2	1.9	5.1	111	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000019578	Ubxn6	ENSMUST00000151943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019578	Ubxn6	ENSMUST00000132804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024462	Gabbr1	ENSMUST00000172789	ENSMUSP00000134580	TRANSLATION	protein_coding	-	-	1	229	0	1.96	0	50.4	0	3,-2	-	-	0	MINOR
ENSMUSG00000024462	Gabbr1	ENSMUST00000174456	ENSMUSP00000134409	TRANSLATION	protein_coding	-	-	1	229	0	1.96	0	50.4	0	3,-2	-	-	0	MINOR
ENSMUSG00000024462	Gabbr1	ENSMUST00000025338	ENSMUSP00000025338	TRANSLATION	protein_coding	-	CCDS37616.1	1	960	0	12.73	6.3	470.1	8	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024462	Gabbr1	ENSMUST00000174866	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024462	Gabbr1	ENSMUST00000173823	ENSMUSP00000133797	TRANSLATION	nonsense_mediated_decay	-	-	1	177	0	0.6	0	17.8	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024462	Gabbr1	ENSMUST00000173564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024462	Gabbr1	ENSMUST00000174071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024462	Gabbr1	ENSMUST00000174826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024462	Gabbr1	ENSMUST00000172792	ENSMUSP00000134268	TRANSLATION	protein_coding	-	-	1	844	0	10.8	1.2	422.5	8	3,-1	-	-	5.362	MINOR
ENSMUSG00000024462	Gabbr1	ENSMUST00000174181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024462	Gabbr1	ENSMUST00000174347	ENSMUSP00000134346	TRANSLATION	protein_coding	stop	-	5	213	0	4.5	0	83.6	0	3,-1	-	-	-1	MINOR
ENSMUSG00000024128	Sbp	ENSMUST00000183017	ENSMUSP00000138447	TRANSLATION	protein_coding	-	-	5	40	0	0.4	0	0	0	4,-1	-	-	0.84	MINOR
ENSMUSG00000024128	Sbp	ENSMUST00000183252	ENSMUSP00000138219	TRANSLATION	protein_coding	-	CCDS57056.1	1	199	0	2.86	0.5	50	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024128	Sbp	ENSMUST00000183155	ENSMUSP00000138341	TRANSLATION	protein_coding	-	CCDS57056.1	2	199	0	2.86	0.5	50	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024128	Sbp	ENSMUST00000182519	ENSMUSP00000138338	TRANSLATION	protein_coding	-	-	2	95	0	1.65	0	0	0	4,-1	-	-	3.462	MINOR
ENSMUSG00000024128	Sbp	ENSMUST00000024940	ENSMUSP00000024940	TRANSLATION	protein_coding	-	CCDS57056.1	1	199	0	2.86	0.5	50	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024128	Sbp	ENSMUST00000181985	ENSMUSP00000138422	TRANSLATION	protein_coding	-	CCDS57056.1	3	199	0	2.86	0.5	50	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024128	Sbp	ENSMUST00000182868	ENSMUSP00000138491	TRANSLATION	protein_coding	stop	-	1	194	0	2.86	0	50	0	1,-3	-	-	-1	MINOR
ENSMUSG00000094878	Olfr130	ENSMUST00000215726	ENSMUSP00000149963	TRANSLATION	protein_coding	-	CCDS28773.1	5	317	0	0.36	1.5	150.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094878	Olfr130	ENSMUST00000217390	ENSMUSP00000149601	TRANSLATION	protein_coding	-	CCDS28773.1	5	317	0	0.36	1.5	150.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094878	Olfr130	ENSMUST00000087129	ENSMUSP00000084369	TRANSLATION	protein_coding	-	CCDS28773.1	-	317	0	0.36	1.5	150.7	4	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023912	Slc25a27	ENSMUST00000233442	ENSMUSP00000156649	TRANSLATION	protein_coding	-	-	-	81	0	0.6	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023912	Slc25a27	ENSMUST00000024705	ENSMUSP00000024705	TRANSLATION	protein_coding	-	CCDS28798.1	1	322	8	5.26	3.5	213.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000014771	Pdcd2	ENSMUST00000137233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014771	Pdcd2	ENSMUST00000125709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014771	Pdcd2	ENSMUST00000054450	ENSMUSP00000052523	TRANSLATION	protein_coding	-	CCDS28413.1	1	343	7	0	1.5	179.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014771	Pdcd2	ENSMUST00000139610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014771	Pdcd2	ENSMUST00000232149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014771	Pdcd2	ENSMUST00000154293	ENSMUSP00000118625	TRANSLATION	protein_coding	-	-	1	258	7	0	0	33.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000055471	Alk	ENSMUST00000086639	ENSMUSP00000083840	TRANSLATION	protein_coding	-	CCDS37688.1	1	1621	18	8.75	0.5	395.1	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000055471	Alk	ENSMUST00000232891	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055471	Alk	ENSMUST00000232804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090509	Sfta2	ENSMUST00000171166	ENSMUSP00000132839	TRANSLATION	protein_coding	-	CCDS50093.1	1	77	0	0	2.7	113.7	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000090509	Sfta2	ENSMUST00000174521	ENSMUSP00000134221	TRANSLATION	protein_coding	-	-	3	117	0	0	0	51.3	0	-4,-2	-	-	2.256	MINOR
ENSMUSG00000090509	Sfta2	ENSMUST00000174534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233980	ENSMUSP00000156898	TRANSLATION	protein_coding	-	CCDS49985.1	-	298	0	0	1.5	99.1	9	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233743	ENSMUSP00000156419	TRANSLATION	protein_coding	-	-	-	232	0	0	0	94.8	7	-4,-7	-	-	5.742	ALTERNATIVE:2
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233318	ENSMUSP00000156598	TRANSLATION	protein_coding	-	-	-	232	0	0	0	94.8	7	-4,-7	-	-	5.742	ALTERNATIVE:2
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233863	ENSMUSP00000156578	TRANSLATION	protein_coding	-	-	-	96	0	0	0	38.8	4	-4,-1	-	-	2.352	MINOR
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233600	ENSMUSP00000156952	TRANSLATION	protein_coding	-	-	-	96	0	0	0	38.8	4	-4,-1	-	-	2.352	MINOR
ENSMUSG00000091151	Vmn1r224	ENSMUST00000170076	ENSMUSP00000132957	TRANSLATION	protein_coding	-	CCDS49985.1	-	298	0	0	1.5	99.1	9	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233161	ENSMUSP00000156647	TRANSLATION	protein_coding	-	-	-	96	0	0	0	38.8	4	-4,-1	-	-	2.352	MINOR
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233891	ENSMUSP00000156520	TRANSLATION	protein_coding	-	-	-	96	0	0	0	38.8	4	-4,-1	-	-	2.352	MINOR
ENSMUSG00000091151	Vmn1r224	ENSMUST00000233642	ENSMUSP00000156636	TRANSLATION	protein_coding	-	CCDS49985.1	-	298	0	0	1.5	99.1	9	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000024067	Dpy30	ENSMUST00000233059	ENSMUSP00000156471	TRANSLATION	protein_coding	stop	-	-	39	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024067	Dpy30	ENSMUST00000233187	ENSMUSP00000156790	TRANSLATION	protein_coding	-	-	-	47	0	1	0	0	0	-4,-5	-	-	2.256	MINOR
ENSMUSG00000024067	Dpy30	ENSMUST00000232687	ENSMUSP00000156830	TRANSLATION	protein_coding	-	CCDS28970.1	-	99	0	2.66	15	75.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024067	Dpy30	ENSMUST00000112571	ENSMUSP00000108190	TRANSLATION	protein_coding	-	CCDS28970.1	2	99	0	2.66	15	75.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024067	Dpy30	ENSMUST00000164832	ENSMUSP00000126702	TRANSLATION	protein_coding	-	CCDS28970.1	1	99	0	2.66	15	75.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024067	Dpy30	ENSMUST00000233581	ENSMUSP00000156795	TRANSLATION	protein_coding	-	CCDS28970.1	-	99	0	2.66	15	75.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000081724	Olfr129	ENSMUST00000122318	ENSMUSP00000113564	TRANSLATION	protein_coding	-	-	-	330	0	0.36	0	188.8	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000081724	Olfr129	ENSMUST00000216476	ENSMUSP00000149327	TRANSLATION	protein_coding	-	CCDS28772.2	3	321	0	0.36	3.9	188.8	7	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000024118	Tedc2	ENSMUST00000124557	ENSMUSP00000119405	TRANSLATION	nonsense_mediated_decay	start	-	5	94	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024118	Tedc2	ENSMUST00000149916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024118	Tedc2	ENSMUST00000024930	ENSMUSP00000024930	TRANSLATION	protein_coding	-	CCDS28479.1	1	436	0	0	1.5	469.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024118	Tedc2	ENSMUST00000137648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024118	Tedc2	ENSMUST00000138818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038500	Prr3	ENSMUST00000173872	ENSMUSP00000134021	TRANSLATION	protein_coding	stop	-	5	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038500	Prr3	ENSMUST00000165613	ENSMUSP00000125802	TRANSLATION	protein_coding	-	CCDS50099.1	1	88	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038500	Prr3	ENSMUST00000173724	ENSMUSP00000133895	TRANSLATION	protein_coding	stop	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038500	Prr3	ENSMUST00000172429	ENSMUSP00000129651	TRANSLATION	protein_coding	-	CCDS70807.1	1	143	4	0	1.5	23.9	0	-4,-6	-	-	10.161	ALTERNATIVE:2
ENSMUSG00000038500	Prr3	ENSMUST00000173417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038500	Prr3	ENSMUST00000173585	ENSMUSP00000134373	TRANSLATION	protein_coding	-	CCDS70807.1	2	143	4	0	1.5	23.9	0	-4,-6	-	-	10.161	ALTERNATIVE:2
ENSMUSG00000038500	Prr3	ENSMUST00000172900	ENSMUSP00000134115	TRANSLATION	protein_coding	-	CCDS50099.1	2	88	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038500	Prr3	ENSMUST00000055454	ENSMUSP00000052166	TRANSLATION	protein_coding	-	CCDS28714.1	1	190	4	0	4.1	23.9	0	-4,-5	-	-	11	PRINCIPAL:3
ENSMUSG00000038500	Prr3	ENSMUST00000174849	ENSMUSP00000134505	TRANSLATION	protein_coding	-	-	2	101	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024429	Gnl1	ENSMUST00000087200	ENSMUSP00000084450	TRANSLATION	protein_coding	-	CCDS37606.1	1	607	14	0.94	7.5	49.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024429	Gnl1	ENSMUST00000174275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024049	Myom1	ENSMUST00000232716	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024049	Myom1	ENSMUST00000233653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024049	Myom1	ENSMUST00000233418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024049	Myom1	ENSMUST00000179759	ENSMUSP00000136266	TRANSLATION	protein_coding	-	CCDS50176.1	5	1569	0	25.09	0.5	477.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024049	Myom1	ENSMUST00000073211	ENSMUSP00000072945	TRANSLATION	protein_coding	-	CCDS37685.1	1	1667	0	25.09	0.5	477.7	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000024049	Myom1	ENSMUST00000232851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024049	Myom1	ENSMUST00000024847	ENSMUSP00000024847	TRANSLATION	protein_coding	-	-	5	1569	0	25.024	0	477.7	0	-4,-7	-	-	11.868	ALTERNATIVE:2
ENSMUSG00000024049	Myom1	ENSMUST00000233790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024049	Myom1	ENSMUST00000233893	ENSMUSP00000156962	TRANSLATION	protein_coding	stop	-	-	233	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000173915	ENSMUSP00000133425	TRANSLATION	protein_coding	stop	-	3	58	0	1.83	2	80.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000174779	ENSMUSP00000133684	TRANSLATION	protein_coding	-	-	2	164	4	3.83	0	203.1	0	-4,-5	-	-	7.84	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000173189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024387	Csnk2b	ENSMUST00000173633	ENSMUSP00000133826	TRANSLATION	protein_coding	start	-	5	180	4	1.75	0	133.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000174024	ENSMUSP00000134673	TRANSLATION	protein_coding	-	CCDS79541.1	5	257	3	3.73	0.5	174.9	0	-4,-5	-	-	5.802	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000174306	ENSMUSP00000134413	TRANSLATION	protein_coding	stop	-	5	122	2	3.58	0	173.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000025246	ENSMUSP00000025246	TRANSLATION	protein_coding	-	CCDS28684.1	1	215	4	5.33	17.5	289.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024387	Csnk2b	ENSMUST00000173114	ENSMUSP00000134218	TRANSLATION	protein_coding	-	CCDS28684.1	1	215	4	5.33	17.5	289.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024387	Csnk2b	ENSMUST00000172765	ENSMUSP00000134523	TRANSLATION	protein_coding	stop	-	2	206	4	4.58	0	274.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024387	Csnk2b	ENSMUST00000174855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044279	Crb3	ENSMUST00000097299	ENSMUSP00000094902	TRANSLATION	protein_coding	-	CCDS28924.1	1	113	0	0	0.5	0	2	0,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000044279	Crb3	ENSMUST00000169543	ENSMUSP00000125760	TRANSLATION	protein_coding	-	CCDS84327.1	2	117	0	0	0.5	0	2	0,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000044279	Crb3	ENSMUST00000163763	ENSMUSP00000132502	TRANSLATION	protein_coding	-	CCDS28924.1	2	113	0	0	0.5	0	2	0,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000044279	Crb3	ENSMUST00000163628	ENSMUSP00000126402	TRANSLATION	protein_coding	stop	-	2	62	3	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000044279	Crb3	ENSMUST00000071826	ENSMUSP00000071729	TRANSLATION	protein_coding	-	CCDS28924.1	3	113	0	0	0.5	0	2	0,-3	-	-	0	PRINCIPAL:3
ENSMUSG00000079553	Kifc1	ENSMUST00000174507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079553	Kifc1	ENSMUST00000172608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079553	Kifc1	ENSMUST00000114361	ENSMUSP00000110001	TRANSLATION	protein_coding	-	-	5	611	12	4.764	0	315.8	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000079553	Kifc1	ENSMUST00000173492	ENSMUSP00000134572	TRANSLATION	protein_coding	-	CCDS57065.1	1	674	12	4.764	1.7	315.5	0	-4,-7	-	-	17.982	PRINCIPAL:2
ENSMUSG00000079553	Kifc1	ENSMUST00000173386	ENSMUSP00000133758	TRANSLATION	protein_coding	stop	-	5	218	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000079553	Kifc1	ENSMUST00000173885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079553	Kifc1	ENSMUST00000173982	ENSMUSP00000133520	TRANSLATION	protein_coding	start	-	3	79	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000238151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024045	Akap8	ENSMUST00000235764	ENSMUSP00000157663	TRANSLATION	nonsense_mediated_decay	-	-	-	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000237733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024045	Akap8	ENSMUST00000237381	ENSMUSP00000157659	TRANSLATION	nonsense_mediated_decay	-	-	-	361	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000236267	ENSMUSP00000158078	TRANSLATION	nonsense_mediated_decay	start	-	-	59	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000002699	ENSMUSP00000002699	TRANSLATION	protein_coding	-	CCDS37555.1	1	687	4	0	1.5	225	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024045	Akap8	ENSMUST00000236303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024045	Akap8	ENSMUST00000235205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024045	Akap8	ENSMUST00000235702	ENSMUSP00000157462	TRANSLATION	protein_coding	stop	-	-	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000235360	ENSMUSP00000158225	TRANSLATION	protein_coding	stop	-	-	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000236761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024045	Akap8	ENSMUST00000236580	ENSMUSP00000157828	TRANSLATION	protein_coding	stop	-	-	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000237103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024045	Akap8	ENSMUST00000236785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024045	Akap8	ENSMUST00000237860	ENSMUSP00000158289	TRANSLATION	protein_coding	stop	-	-	148	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024045	Akap8	ENSMUST00000236954	ENSMUSP00000158412	TRANSLATION	nonsense_mediated_decay	-	-	-	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045378	Pxt1	ENSMUST00000232977	ENSMUSP00000156741	TRANSLATION	protein_coding	-	-	-	82	0	0	0	103.6	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000045378	Pxt1	ENSMUST00000233413	ENSMUSP00000156410	TRANSLATION	protein_coding	-	-	-	18	0	0	0	35.8	0	-4,-5	-	-	1.932	MINOR
ENSMUSG00000045378	Pxt1	ENSMUST00000051526	ENSMUSP00000053366	TRANSLATION	protein_coding	-	CCDS37534.1	1	51	0	0	0.5	103.6	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000042848	Vmn1r226	ENSMUST00000061756	ENSMUSP00000058266	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000233722	ENSMUSP00000156912	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000233808	ENSMUSP00000156839	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000232818	ENSMUSP00000156925	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000232708	ENSMUSP00000156517	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000233159	ENSMUSP00000156658	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042848	Vmn1r226	ENSMUST00000233959	ENSMUSP00000156961	TRANSLATION	protein_coding	-	CCDS28426.1	-	298	0	0	1.5	85	5	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000044172	Ptx4	ENSMUST00000054930	ENSMUSP00000055984	TRANSLATION	protein_coding	-	CCDS50031.1	1	482	9	0.618	0.5	103.7	0	4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000044172	Ptx4	ENSMUST00000233641	ENSMUSP00000156655	TRANSLATION	nonsense_mediated_decay	start	-	-	96	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000044172	Ptx4	ENSMUST00000233502	ENSMUSP00000156881	TRANSLATION	protein_coding	-	-	-	124	0	0	0	0	0	4,-2	-	-	0	MINOR
ENSMUSG00000044172	Ptx4	ENSMUST00000232902	ENSMUSP00000156495	TRANSLATION	protein_coding	-	-	-	452	9	0.618	0.5	103.7	0	3,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000059791	Nrm	ENSMUST00000172931	ENSMUSP00000134569	TRANSLATION	protein_coding	start/stop	-	3	101	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000059791	Nrm	ENSMUST00000074259	ENSMUSP00000073873	TRANSLATION	protein_coding	-	CCDS28708.1	1	262	0	0	1.5	0	4	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000059791	Nrm	ENSMUST00000174873	ENSMUSP00000133355	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000138971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000173658	ENSMUSP00000133778	TRANSLATION	nonsense_mediated_decay	-	-	5	88	0	2.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000147983	ENSMUSP00000133334	TRANSLATION	protein_coding	start/stop	-	5	143	0	3.5	0	38.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000231928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000136975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000173359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000007708	ENSMUSP00000007708	TRANSLATION	protein_coding	-	CCDS28432.1	1	589	0	15.16	14.2	100.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000007564	Ppp2r1a	ENSMUST00000139293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038805	Six3	ENSMUST00000175898	ENSMUSP00000135677	TRANSLATION	protein_coding	-	CCDS50203.1	1	333	0	1	2.9	203.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038805	Six3	ENSMUST00000162695	ENSMUSP00000125169	TRANSLATION	protein_coding	-	-	5	347	0	1	0	203.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000038805	Six3	ENSMUST00000176081	ENSMUSP00000135312	TRANSLATION	protein_coding	-	CCDS50203.1	1	333	0	1	2.9	203.8	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000117819	Gm50253	ENSMUST00000133257	ENSMUSP00000115777	TRANSLATION	nonsense_mediated_decay,RT	-	-	1	459	10	0	0.5	76.5	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000024172	St6gal2	ENSMUST00000153220	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024172	St6gal2	ENSMUST00000086878	ENSMUSP00000084091	TRANSLATION	protein_coding	-	-	1	438	7	3	0.5	93.1	1	-1,-5	-	-	9.294	MINOR
ENSMUSG00000024172	St6gal2	ENSMUST00000025000	ENSMUSP00000025000	TRANSLATION	protein_coding	-	CCDS84324.1	5	524	14	4	1.5	127.1	1	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024172	St6gal2	ENSMUST00000133899	ENSMUSP00000120762	TRANSLATION	protein_coding	stop	-	1	355	2	0.2	0	0	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000060017	Olfr121	ENSMUST00000074555	ENSMUSP00000084377	TRANSLATION	protein_coding	-	CCDS28763.1	1	321	0	0.42	1.5	189.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060017	Olfr121	ENSMUST00000174675	ENSMUSP00000133865	TRANSLATION	protein_coding	-	CCDS28763.1	5	321	0	0.42	1.5	189.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000117145	Gm4356	ENSMUST00000233003	ENSMUSP00000156831	TRANSLATION	protein_coding	-	-	-	68	0	1	21.5	47.6	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000035842	Ddx11	ENSMUST00000163605	ENSMUSP00000130440	TRANSLATION	protein_coding	-	CCDS28945.1	5	880	8	9.058	0.5	360.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000035842	Ddx11	ENSMUST00000226095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035842	Ddx11	ENSMUST00000224903	ENSMUSP00000153635	TRANSLATION	nonsense_mediated_decay	-	-	-	393	8	1.98	0	107.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035842	Ddx11	ENSMUST00000224497	ENSMUSP00000153436	TRANSLATION	protein_coding	-	-	-	906	8	9.058	0.5	360.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000035842	Ddx11	ENSMUST00000223805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035842	Ddx11	ENSMUST00000225956	ENSMUSP00000152906	TRANSLATION	protein_coding	stop	-	-	168	8	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035842	Ddx11	ENSMUST00000223600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035842	Ddx11	ENSMUST00000223801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035842	Ddx11	ENSMUST00000225687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095377	Olfr91	ENSMUST00000087144	ENSMUSP00000129446	TRANSLATION	protein_coding	-	CCDS50107.1	-	312	0	0.3	6.3	168.7	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095377	Olfr91	ENSMUST00000217372	ENSMUSP00000150298	TRANSLATION	protein_coding	-	CCDS50107.1	5	312	0	0.3	6.3	168.7	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095377	Olfr91	ENSMUST00000216376	ENSMUSP00000149656	TRANSLATION	protein_coding	-	CCDS50107.1	5	312	0	0.3	6.3	168.7	4	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000059811	Atl2	ENSMUST00000222243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059811	Atl2	ENSMUST00000221286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059811	Atl2	ENSMUST00000221666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059811	Atl2	ENSMUST00000223273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059811	Atl2	ENSMUST00000222415	ENSMUSP00000152866	TRANSLATION	protein_coding	start	-	3	87	0	1	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000059811	Atl2	ENSMUST00000068282	ENSMUSP00000064758	TRANSLATION	protein_coding	-	CCDS37700.1	1	583	22	10.78	7.5	366.8	4	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000059811	Atl2	ENSMUST00000222193	ENSMUSP00000152340	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059811	Atl2	ENSMUST00000112437	ENSMUSP00000108056	TRANSLATION	protein_coding	-	CCDS37701.1	1	412	9	8.45	5.3	251.9	4	-4,-5	-	-	3.324	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000117600	ENSMUSP00000113068	TRANSLATION	protein_coding	-	-	1	106	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231358	ENSMUSP00000155876	TRANSLATION	protein_coding	-	CCDS50044.1	-	96	0	0	9.6	30.5	0	-4,-5	-	-	9	PRINCIPAL:2
ENSMUSG00000046711	Hmga1	ENSMUST00000118570	ENSMUSP00000114101	TRANSLATION	protein_coding	-	CCDS50044.1	1	96	0	0	9.6	30.5	0	-4,-5	-	-	9	PRINCIPAL:2
ENSMUSG00000046711	Hmga1	ENSMUST00000232253	ENSMUSP00000155874	TRANSLATION	protein_coding	-	-	-	106	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000232552	ENSMUSP00000156044	TRANSLATION	protein_coding	-	CCDS50044.1	-	96	0	0	9.6	30.5	0	-4,-5	-	-	9	PRINCIPAL:2
ENSMUSG00000046711	Hmga1	ENSMUST00000231874	ENSMUSP00000156199	TRANSLATION	protein_coding	-	CCDS28564.1	-	107	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231866	ENSMUSP00000155966	TRANSLATION	protein_coding	-	-	-	118	0	0	1.5	19.1	0	-4,-5	-	-	3.93	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231796	ENSMUSP00000155922	TRANSLATION	protein_coding	-	-	-	111	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000232013	ENSMUSP00000155886	TRANSLATION	protein_coding	-	CCDS28564.1	-	107	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231780	ENSMUSP00000155964	TRANSLATION	protein_coding	-	-	-	87	0	0	0	30.5	0	-4,-5	-	-	6	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000114888	ENSMUSP00000110538	TRANSLATION	protein_coding	-	CCDS50044.1	1	96	0	0	9.6	30.5	0	-4,-5	-	-	9	PRINCIPAL:2
ENSMUSG00000046711	Hmga1	ENSMUST00000118599	ENSMUSP00000113015	TRANSLATION	protein_coding	-	CCDS28564.1	3	107	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231825	ENSMUSP00000156327	TRANSLATION	protein_coding	-	CCDS50044.1	-	96	0	0	9.6	30.5	0	-4,-5	-	-	9	PRINCIPAL:2
ENSMUSG00000046711	Hmga1	ENSMUST00000232265	ENSMUSP00000156173	TRANSLATION	protein_coding	-	CCDS28564.1	-	107	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000231243	ENSMUSP00000155919	TRANSLATION	protein_coding	-	-	-	118	0	0	0	10	0	-4,-5	-	-	1.968	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000119486	ENSMUSP00000113916	TRANSLATION	protein_coding	-	CCDS28564.1	2	107	0	0	6.3	30.5	0	-4,-5	-	-	7.848	MINOR
ENSMUSG00000046711	Hmga1	ENSMUST00000117254	ENSMUSP00000113011	TRANSLATION	protein_coding	-	-	2	95	0	0	9.6	30.5	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000033327	Tnxb	ENSMUST00000168533	ENSMUSP00000127487	TRANSLATION	protein_coding	-	CCDS28656.2	1	3126	0	11.2	0.5	1218.3	0	4,-1	-	-	6	MINOR
ENSMUSG00000033327	Tnxb	ENSMUST00000087399	ENSMUSP00000084661	TRANSLATION	protein_coding	-	-	5	4006	0	11.2	0	1546.2	0	4,-1	-	-	9.312	MINOR
ENSMUSG00000033327	Tnxb	ENSMUST00000238305	ENSMUSP00000158703	TRANSLATION	protein_coding	-	-	-	4114	0	11.2	0	1591	0	4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000033327	Tnxb	ENSMUST00000238967	ENSMUSP00000158977	TRANSLATION	protein_coding	-	-	-	4356	0	11.2	0.5	1590.9	0	4,-1	-	-	11.994	PRINCIPAL:5
ENSMUSG00000023930	Crisp2	ENSMUST00000131699	ENSMUSP00000115730	TRANSLATION	protein_coding	-	-	1	100	1	2.198	0	24	0	4,-1	-	-	1	MINOR
ENSMUSG00000023930	Crisp2	ENSMUST00000232709	ENSMUSP00000156411	TRANSLATION	protein_coding	-	CCDS28786.1	-	243	2	6	5.1	145.5	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000023930	Crisp2	ENSMUST00000233679	ENSMUSP00000156388	TRANSLATION	nonsense_mediated_decay	-	-	-	172	2	4	0	79.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023930	Crisp2	ENSMUST00000124399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023930	Crisp2	ENSMUST00000144243	ENSMUSP00000114224	TRANSLATION	protein_coding	stop	-	3	171	2	3.8	0	79.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023930	Crisp2	ENSMUST00000141204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023930	Crisp2	ENSMUST00000233529	ENSMUSP00000156818	TRANSLATION	protein_coding	-	CCDS28786.1	-	243	2	6	5.1	145.5	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000023930	Crisp2	ENSMUST00000024724	ENSMUSP00000024724	TRANSLATION	protein_coding	-	CCDS28786.1	1	243	2	6	5.1	145.5	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000024070	Prkd3	ENSMUST00000119284	ENSMUSP00000113395	TRANSLATION	protein_coding	-	CCDS50185.1	1	890	34	11.16	8.8	380.1	0	-4,-2	-	-	20.988	ALTERNATIVE:1
ENSMUSG00000024070	Prkd3	ENSMUST00000168887	ENSMUSP00000132004	TRANSLATION	protein_coding	-	CCDS37699.1	5	889	34	11.16	8.8	380.1	0	-4,-2	-	-	20.988	PRINCIPAL:3
ENSMUSG00000024070	Prkd3	ENSMUST00000124229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024070	Prkd3	ENSMUST00000118991	ENSMUSP00000112775	TRANSLATION	protein_coding	-	-	2	297	16	3.2	0	107.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024070	Prkd3	ENSMUST00000118768	ENSMUSP00000113232	TRANSLATION	protein_coding	-	CCDS50184.1	1	795	34	11.16	0.5	380.3	0	-4,-5	-	-	18	MINOR
ENSMUSG00000024070	Prkd3	ENSMUST00000130070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024070	Prkd3	ENSMUST00000146917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024070	Prkd3	ENSMUST00000003191	ENSMUSP00000003191	TRANSLATION	protein_coding	-	CCDS37699.1	1	889	34	11.16	8.8	380.1	0	-4,-2	-	-	20.988	PRINCIPAL:3
ENSMUSG00000096696	Zfp960	ENSMUST00000127027	ENSMUSP00000123102	TRANSLATION	protein_coding	-	CCDS49964.1	1	546	59	2.2	0.5	285.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000066938	Gm10190	ENSMUST00000086549	ENSMUSP00000083736	TRANSLATION	protein_coding	start	-	-	107	0	0	0	0	0	-4,0	-	-	-1	PRINCIPAL:1
ENSMUSG00000001870	Ltbp1	ENSMUST00000112516	ENSMUSP00000108135	TRANSLATION	protein_coding	-	CCDS37694.1	5	1394	111	12.535	2.9	677.5	0	1,-3	-	-	18.884	ALTERNATIVE:2
ENSMUSG00000001870	Ltbp1	ENSMUST00000001927	ENSMUSP00000001927	TRANSLATION	protein_coding	-	CCDS28973.1	5	1712	111	12.535	1.5	677.5	0	4,-2	-	-	18.232	PRINCIPAL:3
ENSMUSG00000001870	Ltbp1	ENSMUST00000135750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001870	Ltbp1	ENSMUST00000135447	ENSMUSP00000116890	TRANSLATION	protein_coding	stop	-	1	980	81	10.785	0	464.4	0	1,-3	-	-	-1	MINOR
ENSMUSG00000001870	Ltbp1	ENSMUST00000112514	ENSMUSP00000108133	TRANSLATION	protein_coding	-	CCDS84336.1	5	1341	111	12.135	5.3	663.2	0	1,-3	-	-	18.344	ALTERNATIVE:1
ENSMUSG00000001870	Ltbp1	ENSMUST00000234327	ENSMUSP00000157367	TRANSLATION	protein_coding	start/stop	-	-	82	14	2	0	101.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001870	Ltbp1	ENSMUST00000234008	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001870	Ltbp1	ENSMUST00000234490	ENSMUSP00000157016	TRANSLATION	protein_coding	-	-	-	1713	111	12.535	1.5	677.5	0	4,-2	-	-	18.232	ALTERNATIVE:2
ENSMUSG00000001870	Ltbp1	ENSMUST00000127458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001870	Ltbp1	ENSMUST00000146839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060475	Wtap	ENSMUST00000007007	ENSMUSP00000007007	TRANSLATION	protein_coding	-	CCDS49950.1	1	396	0	0	14.8	208	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000060475	Wtap	ENSMUST00000233467	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060475	Wtap	ENSMUST00000159551	ENSMUSP00000124205	TRANSLATION	protein_coding	-	CCDS49950.1	5	396	0	0	14.8	208	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000060475	Wtap	ENSMUST00000233867	ENSMUSP00000156876	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	33	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060475	Wtap	ENSMUST00000159986	ENSMUSP00000123961	TRANSLATION	protein_coding	-	CCDS49949.1	1	151	0	0	5.1	99.1	0	-4,-5	-	-	1.188	MINOR
ENSMUSG00000060475	Wtap	ENSMUST00000161901	ENSMUSP00000156835	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060475	Wtap	ENSMUST00000160781	ENSMUSP00000124138	TRANSLATION	protein_coding	-	CCDS49949.1	1	151	0	0	5.1	99.1	0	-4,-5	-	-	1.188	MINOR
ENSMUSG00000060475	Wtap	ENSMUST00000162395	ENSMUSP00000125419	TRANSLATION	protein_coding	stop	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060475	Wtap	ENSMUST00000159104	ENSMUSP00000125337	TRANSLATION	protein_coding	start	-	5	139	0	0	0	101.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024173	Tpsab1	ENSMUST00000153118	ENSMUSP00000120741	TRANSLATION	protein_coding	-	-	1	310	6	4.75	1	228.5	0	0,2	-	-	18	PRINCIPAL:1
ENSMUSG00000024173	Tpsab1	ENSMUST00000146856	ENSMUSP00000157192	TRANSLATION	protein_coding	-	-	2	80	0	0	0	0	0	-1,1	-	-	0	MINOR
ENSMUSG00000013766	Ly6g6e	ENSMUST00000172678	ENSMUSP00000134073	TRANSLATION	protein_coding	-	CCDS28679.1	3	134	0	0	2.7	28.2	0	2,-3	-	-	5.34	PRINCIPAL:2
ENSMUSG00000013766	Ly6g6e	ENSMUST00000013910	ENSMUSP00000013910	TRANSLATION	protein_coding	-	CCDS28679.1	1	134	0	0	2.7	28.2	0	2,-3	-	-	5.34	PRINCIPAL:2
ENSMUSG00000013766	Ly6g6e	ENSMUST00000172959	ENSMUSP00000133753	TRANSLATION	protein_coding	-	-	1	166	0	0	0.5	31.7	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000013766	Ly6g6e	ENSMUST00000172494	ENSMUSP00000133645	TRANSLATION	protein_coding	-	-	3	107	0	0	0	0	0	1,-2	-	-	0	MINOR
ENSMUSG00000023460	Rab12	ENSMUST00000146279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023460	Rab12	ENSMUST00000135620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023460	Rab12	ENSMUST00000070538	ENSMUSP00000070134	TRANSLATION	protein_coding	-	-	1	291	21	5.05	0	198.7	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000023460	Rab12	ENSMUST00000155026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023460	Rab12	ENSMUST00000167962	ENSMUSP00000128645	TRANSLATION	protein_coding	-	CCDS50169.1	1	243	21	5.05	1.5	198.7	0	-3,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000073423	Zfp414	ENSMUST00000170225	ENSMUSP00000127118	TRANSLATION	protein_coding	stop	-	3	229	10	0	0	190.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073423	Zfp414	ENSMUST00000169781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073423	Zfp414	ENSMUST00000172455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073423	Zfp414	ENSMUST00000073570	ENSMUSP00000073259	TRANSLATION	protein_coding	-	CCDS37568.1	1	299	10	0	1.5	190.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000073423	Zfp414	ENSMUST00000234535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073423	Zfp414	ENSMUST00000165504	ENSMUSP00000130881	TRANSLATION	protein_coding	stop	-	2	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073423	Zfp414	ENSMUST00000166627	ENSMUSP00000129423	TRANSLATION	protein_coding	-	-	1	250	10	0	0	190.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000057411	Fam173a	ENSMUST00000237093	ENSMUSP00000158502	TRANSLATION	protein_coding	-	-	-	140	14	1.58	0	0	1	-4,-6	-	-	8.682	MINOR
ENSMUSG00000057411	Fam173a	ENSMUST00000236161	ENSMUSP00000158350	TRANSLATION	protein_coding	-	-	-	151	16	1.91	0.5	0	0	-4,-5	-	-	10.854	MINOR
ENSMUSG00000057411	Fam173a	ENSMUST00000236842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057411	Fam173a	ENSMUST00000072735	ENSMUSP00000072518	TRANSLATION	protein_coding	-	CCDS28528.1	1	229	16	2.36	0.5	0	1	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057411	Fam173a	ENSMUST00000237703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057411	Fam173a	ENSMUST00000236683	ENSMUSP00000158301	TRANSLATION	protein_coding	-	-	-	151	16	1.91	0.5	0	0	-4,-5	-	-	10.854	MINOR
ENSMUSG00000057411	Fam173a	ENSMUST00000235327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053600	Zfp472	ENSMUST00000039132	ENSMUSP00000036514	TRANSLATION	protein_coding	-	CCDS50062.1	1	534	48	1.7	1.5	160.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053600	Zfp472	ENSMUST00000234770	ENSMUSP00000157247	TRANSLATION	protein_coding	stop	-	-	98	0	1	0	75.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234579	ENSMUSP00000157158	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234293	ENSMUSP00000157234	TRANSLATION	nonsense_mediated_decay	-	-	-	46	7	1	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234583	ENSMUSP00000157034	TRANSLATION	protein_coding	-	-	-	251	13	4.79	0	254.2	0	-4,-5	-	-	12.042	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234597	ENSMUSP00000157064	TRANSLATION	protein_coding	-	-	-	211	6	4.318	1.5	228.6	0	-4,-6	-	-	4.896	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039183	Nubp2	ENSMUST00000234968	ENSMUSP00000157175	TRANSLATION	protein_coding	-	-	-	245	11	4.748	0	295.3	0	-4,-5	-	-	13.092	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234352	ENSMUSP00000157112	TRANSLATION	nonsense_mediated_decay	-	-	-	50	7	1	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000044252	ENSMUSP00000049319	TRANSLATION	protein_coding	-	CCDS28500.1	1	275	13	5.648	1.5	324.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039183	Nubp2	ENSMUST00000234928	ENSMUSP00000157378	TRANSLATION	protein_coding	-	-	-	211	6	4.318	1.5	228.6	0	-4,-6	-	-	4.896	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234598	ENSMUSP00000157118	TRANSLATION	protein_coding	start	-	-	189	4	3.148	0	209.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000235055	ENSMUSP00000157236	TRANSLATION	nonsense_mediated_decay	-	-	-	58	7	1	0	45.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234261	ENSMUSP00000157043	TRANSLATION	nonsense_mediated_decay	-	-	-	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234674	ENSMUSP00000157349	TRANSLATION	nonsense_mediated_decay	-	-	-	64	0	0.8	0	39.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234489	ENSMUSP00000157348	TRANSLATION	nonsense_mediated_decay	-	-	-	133	7	2.196	0	136.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039183	Nubp2	ENSMUST00000234098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024399	Ltb	ENSMUST00000025262	ENSMUSP00000025262	TRANSLATION	protein_coding	-	CCDS28690.1	1	306	0	1.6	1.5	117.2	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000024399	Ltb	ENSMUST00000173600	ENSMUSP00000134706	TRANSLATION	protein_coding	-	-	5	185	0	1.6	0	117.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024399	Ltb	ENSMUST00000173510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023904	Hcfc1r1	ENSMUST00000180140	ENSMUSP00000137336	TRANSLATION	protein_coding	-	CCDS28455.1	2	120	0	0	0.5	184.5	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000023904	Hcfc1r1	ENSMUST00000024697	ENSMUSP00000024697	TRANSLATION	protein_coding	-	CCDS28455.1	1	120	0	0	0.5	184.5	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000023904	Hcfc1r1	ENSMUST00000179928	ENSMUSP00000137205	TRANSLATION	protein_coding	-	-	3	116	0	0	1.5	173.8	0	-4,-7	-	-	5.358	ALTERNATIVE:2
ENSMUSG00000023852	Chd1	ENSMUST00000173040	ENSMUSP00000133406	TRANSLATION	nonsense_mediated_decay	start	-	5	164	0	3.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023852	Chd1	ENSMUST00000174461	ENSMUSP00000134718	TRANSLATION	protein_coding	start	-	2	516	0	7.51	0	185.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023852	Chd1	ENSMUST00000173311	ENSMUSP00000134091	TRANSLATION	protein_coding	-	-	1	1081	7	13.71	0	414.5	0	-4,-5	-	-	6.324	MINOR
ENSMUSG00000023852	Chd1	ENSMUST00000024627	ENSMUSP00000024627	TRANSLATION	protein_coding	-	CCDS28416.1	1	1711	7	21.21	1.5	509.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023852	Chd1	ENSMUST00000173159	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056133	Unc93a2	ENSMUST00000070059	ENSMUSP00000064469	TRANSLATION	protein_coding	-	CCDS49942.1	1	458	0	0	1.5	47.6	10	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000056133	Unc93a2	ENSMUST00000231922	ENSMUSP00000156194	TRANSLATION	nonsense_mediated_decay	-	-	-	176	0	0	0	22.3	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000071984	Fndc1	ENSMUST00000097425	ENSMUSP00000095036	TRANSLATION	protein_coding	-	CCDS37431.1	5	1732	0	6.74	0.5	103.7	0	-4,-5	-	-	8.85	MINOR
ENSMUSG00000071984	Fndc1	ENSMUST00000114579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071984	Fndc1	ENSMUST00000239425	ENSMUSP00000159298	TRANSLATION	protein_coding	-	-	-	1833	0	7.38	0.5	134.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000071984	Fndc1	ENSMUST00000097424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071984	Fndc1	ENSMUST00000167580	ENSMUSP00000130996	TRANSLATION	protein_coding	stop	-	2	150	0	1.28	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000095407	Tmem200c	ENSMUST00000178545	ENSMUSP00000137246	TRANSLATION	protein_coding	-	CCDS57107.1	2	637	0	0	1.5	207.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000095407	Tmem200c	ENSMUST00000233019	ENSMUSP00000156683	TRANSLATION	protein_coding	stop	-	-	52	0	0	0	45.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000068036	Afdn	ENSMUST00000137531	ENSMUSP00000116711	TRANSLATION	protein_coding	start	-	3	380	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000068036	Afdn	ENSMUST00000139347	ENSMUSP00000115250	TRANSLATION	protein_coding	stop	-	5	229	0	0	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068036	Afdn	ENSMUST00000123030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068036	Afdn	ENSMUST00000124922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068036	Afdn	ENSMUST00000150848	ENSMUSP00000122447	TRANSLATION	protein_coding	-	-	5	1805	0	10.7	0	356.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068036	Afdn	ENSMUST00000137503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068036	Afdn	ENSMUST00000141640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068036	Afdn	ENSMUST00000239324	ENSMUSP00000159255	TRANSLATION	protein_coding	stop	-	-	87	0	2.65	0	62.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068036	Afdn	ENSMUST00000156591	ENSMUSP00000122204	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068036	Afdn	ENSMUST00000170827	ENSMUSP00000128891	TRANSLATION	protein_coding	-	-	5	1805	0	10.7	0	356.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000068036	Afdn	ENSMUST00000139666	ENSMUSP00000118318	TRANSLATION	protein_coding	-	CCDS49955.1	2	1820	0	10.45	2.9	356.4	0	-4,-5	-	-	11.502	PRINCIPAL:2
ENSMUSG00000068036	Afdn	ENSMUST00000136087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068036	Afdn	ENSMUST00000133422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068036	Afdn	ENSMUST00000137784	ENSMUSP00000119153	TRANSLATION	protein_coding	-	-	5	1827	0	10.516	2.7	356.4	0	-4,-5	-	-	11.634	ALTERNATIVE:2
ENSMUSG00000068036	Afdn	ENSMUST00000137495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068036	Afdn	ENSMUST00000124188	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068036	Afdn	ENSMUST00000137708	ENSMUSP00000114485	TRANSLATION	protein_coding	-	-	5	1663	0	9.85	0	356.4	0	-4,-5	-	-	10.302	MINOR
ENSMUSG00000058159	T2	ENSMUST00000169635	ENSMUSP00000155866	TRANSLATION	nonsense_mediated_decay	-	-	1	183	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000058159	T2	ENSMUST00000234809	ENSMUSP00000157191	TRANSLATION	protein_coding	-	-	-	297	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000058159	T2	ENSMUST00000163578	ENSMUSP00000156321	TRANSLATION	protein_coding	-	-	5	393	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000023945	Slc5a7	ENSMUST00000095712	ENSMUSP00000093379	TRANSLATION	protein_coding	-	CCDS28885.1	1	580	0	3.04	8.8	116.8	12	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000023945	Slc5a7	ENSMUST00000233507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023945	Slc5a7	ENSMUST00000233758	ENSMUSP00000156430	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	1	0,-5	-	-	-1	MINOR
ENSMUSG00000067212	H2-T23	ENSMUST00000102678	ENSMUSP00000099739	TRANSLATION	protein_coding	-	CCDS28715.1	1	357	3	4.531	0.5	362.2	0	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000067212	H2-T23	ENSMUST00000174839	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067212	H2-T23	ENSMUST00000174161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067212	H2-T23	ENSMUST00000174471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002017	Fam98a	ENSMUST00000141969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002017	Fam98a	ENSMUST00000235026	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002017	Fam98a	ENSMUST00000140729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002017	Fam98a	ENSMUST00000112507	ENSMUSP00000108126	TRANSLATION	protein_coding	-	CCDS28974.2	1	515	0	0	6.3	443.7	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000002017	Fam98a	ENSMUST00000234785	ENSMUSP00000157054	TRANSLATION	protein_coding	-	-	-	308	0	0	0	368.5	0	-4,-5	-	-	1.488	MINOR
ENSMUSG00000037104	Socs5	ENSMUST00000234421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037104	Socs5	ENSMUST00000234803	ENSMUSP00000157177	TRANSLATION	protein_coding	stop	-	-	203	0	0.2	0	62.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037104	Socs5	ENSMUST00000041369	ENSMUSP00000038591	TRANSLATION	protein_coding	-	CCDS29014.1	1	536	0	1	8.8	133.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000216225	ENSMUSP00000151044	TRANSLATION	protein_coding	-	CCDS28741.1	5	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000073667	ENSMUSP00000094937	TRANSLATION	protein_coding	-	CCDS28741.1	5	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000207414	ENSMUSP00000146667	TRANSLATION	protein_coding	-	CCDS28741.1	-	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000214848	ENSMUSP00000150081	TRANSLATION	protein_coding	-	CCDS28741.1	5	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000214622	ENSMUSP00000149629	TRANSLATION	protein_coding	-	CCDS28741.1	5	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058802	Olfr97	ENSMUST00000213328	ENSMUSP00000150892	TRANSLATION	protein_coding	-	CCDS28741.1	5	310	0	0.42	2.7	183.9	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094892	Vmn2r101	ENSMUST00000171914	ENSMUSP00000131583	TRANSLATION	protein_coding	-	CCDS49978.1	5	857	0	3.18	1.5	377.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000094892	Vmn2r101	ENSMUST00000232916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067430	Zfp763	ENSMUST00000087654	ENSMUSP00000084936	TRANSLATION	protein_coding	-	CCDS37560.1	1	588	52	1.52	1.5	251.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067430	Zfp763	ENSMUST00000124465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081650	Gm16181	ENSMUST00000118793	ENSMUSP00000114048	TRANSLATION	protein_coding	-	-	1	73	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000058124	H2-M10.3	ENSMUST00000073546	ENSMUSP00000073236	TRANSLATION	protein_coding	-	CCDS28722.1	1	330	0	3.79	0.5	226.1	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000041538	H2-Ob	ENSMUST00000173764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041538	H2-Ob	ENSMUST00000167280	ENSMUSP00000129657	TRANSLATION	protein_coding	-	-	1	245	0	2.8	1	172	1	1,-3	-	-	9.078	MINOR
ENSMUSG00000041538	H2-Ob	ENSMUST00000173681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041538	H2-Ob	ENSMUST00000237064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041538	H2-Ob	ENSMUST00000236838	ENSMUSP00000158326	TRANSLATION	protein_coding	-	-	-	303	0	3.55	0	195.7	1	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000041538	H2-Ob	ENSMUST00000172952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041538	H2-Ob	ENSMUST00000095342	ENSMUSP00000092985	TRANSLATION	protein_coding	-	CCDS37582.1	1	271	0	3.55	3.9	195.7	1	1,-3	-	-	13	PRINCIPAL:2
ENSMUSG00000024191	Bnip1	ENSMUST00000015725	ENSMUSP00000015725	TRANSLATION	protein_coding	-	CCDS28555.1	1	228	0	0	19.5	117.1	1	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024191	Bnip1	ENSMUST00000135824	ENSMUSP00000118933	TRANSLATION	protein_coding	-	-	5	194	0	0	1.2	117.1	1	-4,-5	-	-	6.044	MINOR
ENSMUSG00000024191	Bnip1	ENSMUST00000126505	ENSMUSP00000118354	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024191	Bnip1	ENSMUST00000134344	ENSMUSP00000122734	TRANSLATION	nonsense_mediated_decay	start	-	5	126	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024191	Bnip1	ENSMUST00000147516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024191	Bnip1	ENSMUST00000135899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024191	Bnip1	ENSMUST00000128461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024191	Bnip1	ENSMUST00000131362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024191	Bnip1	ENSMUST00000137989	ENSMUSP00000116284	TRANSLATION	protein_coding	start	-	5	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024143	Rhoq	ENSMUST00000234309	ENSMUSP00000157092	TRANSLATION	protein_coding	-	-	-	94	8	2	0	32.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024143	Rhoq	ENSMUST00000024956	ENSMUSP00000024956	TRANSLATION	protein_coding	-	CCDS29010.1	1	205	24	5	10.1	172.9	0	-3,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000024143	Rhoq	ENSMUST00000139344	ENSMUSP00000116780	TRANSLATION	protein_coding	stop	-	5	153	21	4	0	144	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000066720	Cldn9	ENSMUST00000085989	ENSMUSP00000093236	TRANSLATION	protein_coding	-	CCDS28458.1	-	217	0	1	8.8	112.7	0	1,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000067341	H2-Eb2	ENSMUST00000050325	ENSMUSP00000056814	TRANSLATION	protein_coding	-	CCDS28646.1	1	287	0	3.2	1.5	192.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000057203	Vmn1r234	ENSMUST00000235895	ENSMUSP00000157848	TRANSLATION	protein_coding	-	CCDS28435.1	-	329	0	0	0.5	86.9	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057203	Vmn1r234	ENSMUST00000079633	ENSMUSP00000078579	TRANSLATION	protein_coding	-	CCDS28435.1	-	329	0	0	0.5	86.9	6	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057203	Vmn1r234	ENSMUST00000237806	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042203	Tbc1d22b	ENSMUST00000048677	ENSMUSP00000046877	TRANSLATION	protein_coding	-	CCDS28597.1	1	505	0	9.55	8.4	177	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000042203	Tbc1d22b	ENSMUST00000160114	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042203	Tbc1d22b	ENSMUST00000234778	ENSMUSP00000157044	TRANSLATION	nonsense_mediated_decay	-	-	-	255	0	1.55	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062165	Vmn1r232	ENSMUST00000237554	ENSMUSP00000157752	TRANSLATION	protein_coding	-	CCDS28431.1	-	351	0	0	0.5	103	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000062165	Vmn1r232	ENSMUST00000237560	ENSMUSP00000157872	TRANSLATION	protein_coding	-	CCDS28431.1	-	351	0	0	0.5	103	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000062165	Vmn1r232	ENSMUST00000077001	ENSMUSP00000076261	TRANSLATION	protein_coding	-	CCDS28431.1	-	351	0	0	0.5	103	7	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000023987	Pgc	ENSMUST00000024782	ENSMUSP00000024782	TRANSLATION	protein_coding	-	CCDS28855.1	1	392	5	8.3	3.9	442.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000023987	Pgc	ENSMUST00000144955	ENSMUSP00000123459	TRANSLATION	protein_coding	stop	-	5	142	0	2.3	0	111.5	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024175	Tekt4	ENSMUST00000235033	ENSMUSP00000157356	TRANSLATION	protein_coding	-	-	-	442	0	0	0	443	0	-4,-5	-	-	4.716	MINOR
ENSMUSG00000024175	Tekt4	ENSMUST00000025002	ENSMUSP00000025002	TRANSLATION	protein_coding	-	CCDS28519.1	1	447	0	0	5.9	464.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000024175	Tekt4	ENSMUST00000234436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024175	Tekt4	ENSMUST00000234449	ENSMUSP00000157114	TRANSLATION	protein_coding	-	-	-	383	0	0	0	381.2	0	-4,-5	-	-	1.008	MINOR
ENSMUSG00000024175	Tekt4	ENSMUST00000234104	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003541	Ier3	ENSMUST00000003635	ENSMUSP00000003635	TRANSLATION	protein_coding	-	CCDS28704.1	1	160	0	0	3.9	0	0	-4,-1	-	-	1	PRINCIPAL:1
ENSMUSG00000092519	Actl9	ENSMUST00000174088	ENSMUSP00000134564	TRANSLATION	protein_coding	-	CCDS57063.1	-	415	22	0.8	1.5	337.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048027	Rgmb	ENSMUST00000238157	ENSMUSP00000157870	TRANSLATION	protein_coding	stop	-	-	135	4	1	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000048027	Rgmb	ENSMUST00000231906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048027	Rgmb	ENSMUST00000170578	ENSMUSP00000126177	TRANSLATION	protein_coding	-	CCDS37455.1	1	436	4	4	0.5	442	0	-1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000048027	Rgmb	ENSMUST00000231985	ENSMUSP00000156015	TRANSLATION	protein_coding	stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048027	Rgmb	ENSMUST00000232638	ENSMUSP00000156285	TRANSLATION	protein_coding	-	-	-	239	4	3	0	198.3	0	-1,-4	-	-	8.002	MINOR
ENSMUSG00000048027	Rgmb	ENSMUST00000232592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048027	Rgmb	ENSMUST00000231281	ENSMUSP00000156133	TRANSLATION	protein_coding	stop	-	-	158	4	2	0	88.7	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000049823	Zbtb12	ENSMUST00000173093	ENSMUSP00000133903	TRANSLATION	protein_coding	stop	-	2	68	0	0.8	0	46.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000049823	Zbtb12	ENSMUST00000052778	ENSMUSP00000057515	TRANSLATION	protein_coding	-	CCDS28665.1	1	459	14	1	7.5	123.9	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000011305	Plin5	ENSMUST00000019808	ENSMUSP00000019808	TRANSLATION	protein_coding	-	CCDS37662.1	1	463	0	2.32	1.5	391.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000011305	Plin5	ENSMUST00000113072	ENSMUSP00000108695	TRANSLATION	protein_coding	-	CCDS37662.1	1	463	0	2.32	1.5	391.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023868	Pde10a	ENSMUST00000233052	ENSMUSP00000156509	TRANSLATION	protein_coding	stop	-	-	238	0	2.447	0	37.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000115715	ENSMUSP00000111380	TRANSLATION	protein_coding	-	-	5	716	19	15.395	1.2	343.8	0	-4,-5	-	-	18.098	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000233016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023868	Pde10a	ENSMUST00000115708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023868	Pde10a	ENSMUST00000089085	ENSMUSP00000086485	TRANSLATION	protein_coding	-	CCDS28384.1	1	796	19	15.395	5.1	343.8	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000023868	Pde10a	ENSMUST00000115722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023868	Pde10a	ENSMUST00000136160	ENSMUSP00000156648	TRANSLATION	protein_coding	stop	-	5	123	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000141877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023868	Pde10a	ENSMUST00000149440	ENSMUSP00000123216	TRANSLATION	protein_coding	-	-	1	727	19	15.395	0	343.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000233652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023868	Pde10a	ENSMUST00000115724	ENSMUSP00000111389	TRANSLATION	protein_coding	-	-	5	850	19	15.395	0.5	343.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000115720	ENSMUSP00000111385	TRANSLATION	protein_coding	-	CCDS84274.1	1	779	19	15.395	3.7	343.8	0	-4,-5	-	-	19.318	ALTERNATIVE:2
ENSMUSG00000023868	Pde10a	ENSMUST00000024647	ENSMUSP00000024647	TRANSLATION	protein_coding	-	-	1	716	19	15.395	1.2	343.8	0	-4,-5	-	-	18.098	MINOR
ENSMUSG00000023868	Pde10a	ENSMUST00000115717	ENSMUSP00000138135	TRANSLATION	nonsense_mediated_decay	-	-	5	151	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024247	Pkdcc	ENSMUST00000170758	ENSMUSP00000131445	TRANSLATION	protein_coding	start/stop	-	3	224	0	0.52	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024247	Pkdcc	ENSMUST00000168118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024247	Pkdcc	ENSMUST00000170794	ENSMUSP00000129238	TRANSLATION	protein_coding	-	CCDS28994.2	1	492	0	1.2	0.5	30.7	0	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024247	Pkdcc	ENSMUST00000166528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091350	Vmn2r92	ENSMUST00000169686	ENSMUSP00000128685	TRANSLATION	protein_coding	-	CCDS49970.1	5	860	0	3.1	1.5	392.8	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000077450	Rab11b	ENSMUST00000173987	ENSMUSP00000133921	TRANSLATION	nonsense_mediated_decay	-	-	3	149	20	3.5	0	180.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000077450	Rab11b	ENSMUST00000057373	ENSMUSP00000110021	TRANSLATION	protein_coding	-	CCDS28628.1	1	218	25	5.58	21.5	213.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000077450	Rab11b	ENSMUST00000235046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000077450	Rab11b	ENSMUST00000173860	ENSMUSP00000134448	TRANSLATION	protein_coding	-	-	1	193	15	4.83	0	171.2	0	-4,-5	-	-	7.95	MINOR
ENSMUSG00000077450	Rab11b	ENSMUST00000172894	ENSMUSP00000134544	TRANSLATION	protein_coding	start	-	5	125	13	3.028	0	146.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000077450	Rab11b	ENSMUST00000174744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024054	Smchd1	ENSMUST00000183046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000233872	ENSMUSP00000156880	TRANSLATION	nonsense_mediated_decay	start	-	-	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024054	Smchd1	ENSMUST00000182049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000182747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000147111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000182107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000233839	ENSMUSP00000156815	TRANSLATION	nonsense_mediated_decay	start	-	-	119	0	0	0	42.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024054	Smchd1	ENSMUST00000138193	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024054	Smchd1	ENSMUST00000232914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024054	Smchd1	ENSMUST00000182205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024054	Smchd1	ENSMUST00000127430	ENSMUSP00000121835	TRANSLATION	protein_coding	-	CCDS28958.2	5	2007	0	0	1.5	97.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024054	Smchd1	ENSMUST00000136071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024251	Thada	ENSMUST00000235126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024251	Thada	ENSMUST00000234724	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024251	Thada	ENSMUST00000234313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024251	Thada	ENSMUST00000234529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024251	Thada	ENSMUST00000047524	ENSMUSP00000041701	TRANSLATION	protein_coding	-	CCDS50198.1	1	1938	0	0	1.5	311.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024251	Thada	ENSMUST00000234134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024251	Thada	ENSMUST00000234547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052270	Fpr2	ENSMUST00000149944	ENSMUSP00000153922	TRANSLATION	protein_coding	-	-	1	48	0	0.48	0	0	0	-4,-5	-	-	1.212	MINOR
ENSMUSG00000052270	Fpr2	ENSMUST00000064068	ENSMUSP00000065799	TRANSLATION	protein_coding	-	CCDS28419.1	1	351	0	2.38	0.5	124.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000023885	Thbs2	ENSMUST00000232616	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023885	Thbs2	ENSMUST00000170872	ENSMUSP00000128308	TRANSLATION	protein_coding	-	CCDS49958.1	1	1172	122	15.55	4.1	806.3	0	2,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000043747	1520401A03Rik	ENSMUST00000177300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043747	1520401A03Rik	ENSMUST00000176095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043747	1520401A03Rik	ENSMUST00000062827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043747	1520401A03Rik	ENSMUST00000201734	ENSMUSP00000144664	TRANSLATION	protein_coding	-	-	5	598	0	0	0	0	0	1,-3	-	-	0	PRINCIPAL:5
ENSMUSG00000043747	1520401A03Rik	ENSMUST00000178006	ENSMUSP00000144253	TRANSLATION	protein_coding	-	-	2	232	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000024392	Bag6	ENSMUST00000173550	ENSMUSP00000134628	TRANSLATION	protein_coding	-	CCDS57072.1	1	1122	0	4.3	0.5	207.5	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000173535	ENSMUSP00000133822	TRANSLATION	protein_coding	stop	-	1	563	0	3	0	207.5	0	2,-3	-	-	-1	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000172889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000025250	ENSMUSP00000025250	TRANSLATION	protein_coding	-	CCDS28688.1	5	1154	0	5.3	0.5	207.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024392	Bag6	ENSMUST00000172571	ENSMUSP00000134175	TRANSLATION	protein_coding	-	-	5	1082	0	4.3	0	207.5	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000172882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000174281	ENSMUSP00000134425	TRANSLATION	protein_coding	stop	-	1	1107	0	3	0	207.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000173351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000174613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000173952	ENSMUSP00000134717	TRANSLATION	protein_coding	stop	-	2	253	0	3	0	62.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000174797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000172925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024392	Bag6	ENSMUST00000174478	ENSMUSP00000138117	TRANSLATION	protein_coding	stop	-	2	115	0	3	0	62.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000166426	ENSMUSP00000129324	TRANSLATION	protein_coding	-	CCDS57073.1	1	1136	0	5.3	0.5	207.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024392	Bag6	ENSMUST00000172993	ENSMUSP00000138467	TRANSLATION	protein_coding	start	-	2	120	0	1.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024392	Bag6	ENSMUST00000173491	ENSMUSP00000134279	TRANSLATION	protein_coding	stop	-	5	209	0	3	0	62.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000179624	ENSMUSP00000136268	TRANSLATION	protein_coding	start/stop	-	5	71	4	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000186167	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023826	Prkn	ENSMUST00000168593	ENSMUSP00000127455	TRANSLATION	protein_coding	start/stop	-	5	245	10	5.08	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000218435	ENSMUSP00000151830	TRANSLATION	protein_coding	start/stop	-	5	288	15	6.41	0.5	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000233294	ENSMUSP00000156589	TRANSLATION	nonsense_mediated_decay	-	-	-	214	6	4.146	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000233706	ENSMUSP00000156810	TRANSLATION	protein_coding	-	-	-	274	28	7.41	0.5	68.5	0	-4,-5	-	-	5.094	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000066658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023826	Prkn	ENSMUST00000233411	ENSMUSP00000156556	TRANSLATION	nonsense_mediated_decay	-	-	-	63	0	1	0	57.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000186406	ENSMUSP00000140217	TRANSLATION	protein_coding	start	-	3	104	8	2.79	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000233782	ENSMUSP00000156534	TRANSLATION	nonsense_mediated_decay	-	-	-	59	0	1	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000190894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023826	Prkn	ENSMUST00000190849	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023826	Prkn	ENSMUST00000233634	ENSMUSP00000156481	TRANSLATION	nonsense_mediated_decay	-	-	-	106	0	1.616	0	58.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000233436	ENSMUSP00000156432	TRANSLATION	nonsense_mediated_decay	-	-	-	65	0	1.066	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023826	Prkn	ENSMUST00000191124	ENSMUSP00000140587	TRANSLATION	protein_coding	-	CCDS79506.1	1	464	32	10.99	1.5	139.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023826	Prkn	ENSMUST00000097413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043312	Olfr131	ENSMUST00000215940	ENSMUSP00000149093	TRANSLATION	protein_coding	-	CCDS28774.1	5	314	0	0.42	0.5	191	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043312	Olfr131	ENSMUST00000059560	ENSMUSP00000061861	TRANSLATION	protein_coding	-	CCDS28774.1	-	314	0	0.42	0.5	191	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043312	Olfr131	ENSMUST00000216523	ENSMUSP00000150562	TRANSLATION	protein_coding	-	CCDS28774.1	5	314	0	0.42	0.5	191	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043312	Olfr131	ENSMUST00000172933	ENSMUSP00000134532	TRANSLATION	protein_coding	-	CCDS28774.1	3	314	0	0.42	0.5	191	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000058114	Olfr127	ENSMUST00000217223	ENSMUSP00000149133	TRANSLATION	protein_coding	-	CCDS28769.1	5	323	0	0.2	1.5	156.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058114	Olfr127	ENSMUST00000076331	ENSMUSP00000075669	TRANSLATION	protein_coding	-	CCDS28769.1	-	323	0	0.2	1.5	156.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047123	Ticam1	ENSMUST00000058136	ENSMUSP00000055104	TRANSLATION	protein_coding	-	CCDS28900.1	1	732	0	0.4	0.5	38.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000023906	Cldn6	ENSMUST00000232719	ENSMUSP00000156498	TRANSLATION	protein_coding	-	CCDS28457.1	-	219	0	1	6.4	114.7	3	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000023906	Cldn6	ENSMUST00000024699	ENSMUSP00000024699	TRANSLATION	protein_coding	-	CCDS28457.1	1	219	0	1	6.4	114.7	3	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000023906	Cldn6	ENSMUST00000233364	ENSMUSP00000156806	TRANSLATION	protein_coding	-	CCDS28457.1	-	219	0	1	6.4	114.7	3	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000092111	Vmn2r113	ENSMUST00000234192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092111	Vmn2r113	ENSMUST00000170322	ENSMUSP00000127981	TRANSLATION	protein_coding	-	CCDS50006.1	1	856	4	3.22	0.5	377	7	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000092111	Vmn2r113	ENSMUST00000234465	ENSMUSP00000157294	TRANSLATION	nonsense_mediated_decay	-	-	-	514	0	1.8	0	104.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000092111	Vmn2r113	ENSMUST00000234875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092111	Vmn2r113	ENSMUST00000234787	ENSMUSP00000156994	TRANSLATION	protein_coding	-	-	-	805	4	2.8	0	347.8	7	4,-1	-	-	13.408	MINOR
ENSMUSG00000057409	Zfp53	ENSMUST00000076664	ENSMUSP00000075960	TRANSLATION	protein_coding	-	CCDS28440.1	5	652	63	1.4	0.5	407.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000057409	Zfp53	ENSMUST00000233158	ENSMUSP00000156751	TRANSLATION	protein_coding	-	CCDS28440.1	-	652	63	1.4	0.5	407.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000008482	Rnf151	ENSMUST00000008626	ENSMUSP00000008626	TRANSLATION	protein_coding	-	CCDS37492.1	1	239	16	2.07	1.5	95.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000008482	Rnf151	ENSMUST00000234399	ENSMUSP00000157129	TRANSLATION	protein_coding	-	-	-	212	14	1.47	0	58.7	0	-4,-1	-	-	12.63	MINOR
ENSMUSG00000024406	Pou5f1	ENSMUST00000172651	ENSMUSP00000134654	TRANSLATION	protein_coding	stop	-	1	132	0	3	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024406	Pou5f1	ENSMUST00000025271	ENSMUSP00000025271	TRANSLATION	protein_coding	-	CCDS37600.1	1	352	0	3.4	1.5	195.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024406	Pou5f1	ENSMUST00000173934	ENSMUSP00000134729	TRANSLATION	protein_coding	stop	-	1	132	0	3	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024406	Pou5f1	ENSMUST00000174782	ENSMUSP00000134493	TRANSLATION	protein_coding	stop	-	1	157	0	3	0	161.6	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024406	Pou5f1	ENSMUST00000173256	ENSMUSP00000134060	TRANSLATION	protein_coding	stop	-	1	132	0	3	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024406	Pou5f1	ENSMUST00000173805	ENSMUSP00000133633	TRANSLATION	protein_coding	stop	-	1	132	0	3	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024209	Acsbg3	ENSMUST00000025048	ENSMUSP00000025048	TRANSLATION	protein_coding	-	CCDS37666.1	1	705	22	4.615	0.5	220	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024209	Acsbg3	ENSMUST00000125425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024300	Myo1f	ENSMUST00000087605	ENSMUSP00000084887	TRANSLATION	protein_coding	-	CCDS37567.1	1	1098	15	19.16	1.5	1058.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024300	Myo1f	ENSMUST00000173426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024300	Myo1f	ENSMUST00000235099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024300	Myo1f	ENSMUST00000173372	ENSMUSP00000134715	TRANSLATION	nonsense_mediated_decay	-	-	1	785	15	17.22	0	902.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024300	Myo1f	ENSMUST00000174695	ENSMUSP00000134600	TRANSLATION	protein_coding	stop	-	2	97	6	2.3	0	71.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024339	Tap2	ENSMUST00000127543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024339	Tap2	ENSMUST00000131105	ENSMUSP00000118700	TRANSLATION	protein_coding	stop	-	5	91	0	1.75	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024339	Tap2	ENSMUST00000025197	ENSMUSP00000025197	TRANSLATION	protein_coding	-	CCDS28644.1	1	702	11	12.75	2.7	312.7	3	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024339	Tap2	ENSMUST00000138491	ENSMUSP00000118916	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000024339	Tap2	ENSMUST00000145528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013787	Ehmt2	ENSMUST00000145201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013787	Ehmt2	ENSMUST00000150786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013787	Ehmt2	ENSMUST00000097342	ENSMUSP00000094955	TRANSLATION	protein_coding	-	CCDS70798.1	1	1229	32	13.5	1.5	306.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000013787	Ehmt2	ENSMUST00000172921	ENSMUSP00000134089	TRANSLATION	protein_coding	start/stop	-	3	194	0	5.05	0	85.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000013787	Ehmt2	ENSMUST00000138500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013787	Ehmt2	ENSMUST00000124846	ENSMUSP00000121838	TRANSLATION	protein_coding	start/stop	-	5	441	0	6.464	0	131.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013787	Ehmt2	ENSMUST00000137071	ENSMUSP00000134749	TRANSLATION	nonsense_mediated_decay	start	-	5	155	0	3.6	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013787	Ehmt2	ENSMUST00000114033	ENSMUSP00000109667	TRANSLATION	protein_coding	-	CCDS70797.1	1	1206	32	13.5	1.5	306.7	0	-2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000013787	Ehmt2	ENSMUST00000146418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013787	Ehmt2	ENSMUST00000131915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013787	Ehmt2	ENSMUST00000013931	ENSMUSP00000013931	TRANSLATION	protein_coding	-	CCDS28667.1	1	1263	32	13.5	1.5	306.7	0	-4,-7	-	-	18	PRINCIPAL:4
ENSMUSG00000013787	Ehmt2	ENSMUST00000124002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013787	Ehmt2	ENSMUST00000078061	ENSMUSP00000077208	TRANSLATION	protein_coding	-	CCDS28666.1	1	1172	32	13.5	1.5	306.7	0	-2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000013787	Ehmt2	ENSMUST00000145624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067929	Gm10226	ENSMUST00000072133	ENSMUSP00000072002	TRANSLATION	protein_coding	start/stop	-	-	85	12	1	0	85.4	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036322	H2-Ea	ENSMUST00000134042	ENSMUSP00000158275	TRANSLATION	polymorphic_pseudogene	start	-	-	228	0	2.6	0	192.5	1	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036322	H2-Ea	ENSMUST00000235482	ENSMUSP00000157668	TRANSLATION	protein_coding	start	-	-	228	0	2.6	0	192.5	1	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000023927	Satb1	ENSMUST00000129205	ENSMUSP00000123409	TRANSLATION	protein_coding	stop	-	3	154	0	1.75	0	98.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023927	Satb1	ENSMUST00000129667	ENSMUSP00000116020	TRANSLATION	protein_coding	-	CCDS28876.1	5	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000023927	Satb1	ENSMUST00000144331	ENSMUSP00000116006	TRANSLATION	protein_coding	-	CCDS28876.1	1	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000023927	Satb1	ENSMUST00000152830	ENSMUSP00000119842	TRANSLATION	protein_coding	-	CCDS28876.1	2	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000023927	Satb1	ENSMUST00000124222	ENSMUSP00000116639	TRANSLATION	protein_coding	stop	-	5	74	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023927	Satb1	ENSMUST00000146414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023927	Satb1	ENSMUST00000140979	ENSMUSP00000118839	TRANSLATION	protein_coding	-	-	5	795	0	8.85	3.9	455.7	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000023927	Satb1	ENSMUST00000148559	ENSMUSP00000121224	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023927	Satb1	ENSMUST00000176669	ENSMUSP00000134957	TRANSLATION	protein_coding	-	CCDS28876.1	1	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000023927	Satb1	ENSMUST00000140727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023927	Satb1	ENSMUST00000156051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023927	Satb1	ENSMUST00000137697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023927	Satb1	ENSMUST00000169480	ENSMUSP00000128841	TRANSLATION	protein_coding	-	CCDS28876.1	5	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000023927	Satb1	ENSMUST00000133574	ENSMUSP00000120536	TRANSLATION	protein_coding	-	CCDS28876.1	1	764	0	8.85	3.9	455.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000092586	Ly6g6c	ENSMUST00000174876	ENSMUSP00000133838	TRANSLATION	protein_coding	-	-	1	74	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000092586	Ly6g6c	ENSMUST00000173478	ENSMUSP00000133510	TRANSLATION	protein_coding	-	CCDS28677.1	1	126	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000092586	Ly6g6c	ENSMUST00000173207	ENSMUSP00000134194	TRANSLATION	protein_coding	-	-	3	152	0	0	0	0	0	1,-3	-	-	0	ALTERNATIVE:2
ENSMUSG00000091531	Olfr102	ENSMUST00000169373	ENSMUSP00000126737	TRANSLATION	protein_coding	-	CCDS28745.1	-	308	0	0.42	6.3	174.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000091531	Olfr102	ENSMUST00000217590	ENSMUSP00000149168	TRANSLATION	protein_coding	-	CCDS28745.1	5	308	0	0.42	6.3	174.5	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039193	Nlrc4	ENSMUST00000233637	ENSMUSP00000156704	TRANSLATION	nonsense_mediated_decay	-	-	-	116	0	1.815	0	70	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039193	Nlrc4	ENSMUST00000234086	ENSMUSP00000157167	TRANSLATION	protein_coding	-	-	-	1036	12	7.75	0	141.5	0	-4,-7	-	-	15.714	MINOR
ENSMUSG00000039193	Nlrc4	ENSMUST00000052124	ENSMUSP00000059637	TRANSLATION	protein_coding	-	CCDS37692.1	1	1024	12	8.25	0.5	162.9	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047428	Dlk2	ENSMUST00000170271	ENSMUSP00000132349	TRANSLATION	protein_coding	-	-	5	152	5	2.9	0	0	0	3,-1	-	-	2.202	MINOR
ENSMUSG00000047428	Dlk2	ENSMUST00000166617	ENSMUSP00000128897	TRANSLATION	protein_coding	-	CCDS37634.2	1	382	25	4.6	5.1	105.9	1	3,-1	-	-	19.598	PRINCIPAL:1
ENSMUSG00000047428	Dlk2	ENSMUST00000166280	ENSMUSP00000126993	TRANSLATION	protein_coding	-	CCDS37634.2	1	382	25	4.6	5.1	105.9	1	3,-1	-	-	19.598	PRINCIPAL:1
ENSMUSG00000047428	Dlk2	ENSMUST00000188223	ENSMUSP00000141164	TRANSLATION	protein_coding	stop	-	3	108	0	1.6	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000047428	Dlk2	ENSMUST00000061722	ENSMUSP00000058470	TRANSLATION	protein_coding	-	-	5	425	25	4.8	0	105.9	1	-4,0	-	-	18	MINOR
ENSMUSG00000023829	Slc22a1	ENSMUST00000233691	ENSMUSP00000156652	TRANSLATION	nonsense_mediated_decay	-	-	-	141	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000023829	Slc22a1	ENSMUST00000233601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023829	Slc22a1	ENSMUST00000024596	ENSMUSP00000024596	TRANSLATION	protein_coding	-	CCDS28393.1	1	556	0	4.76	1.5	108.5	12	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044469	Tnfaip8l1	ENSMUST00000233649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044469	Tnfaip8l1	ENSMUST00000077788	ENSMUSP00000076961	TRANSLATION	protein_coding	-	CCDS28897.1	1	186	0	1	10.8	242.6	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000050668	Gpatch11	ENSMUST00000233545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050668	Gpatch11	ENSMUST00000233113	ENSMUSP00000156550	TRANSLATION	protein_coding	stop	-	-	92	0	0	0	20.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050668	Gpatch11	ENSMUST00000233913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050668	Gpatch11	ENSMUST00000170759	ENSMUSP00000126814	TRANSLATION	protein_coding	-	CCDS28979.1	1	264	3	0	2.9	121.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000050668	Gpatch11	ENSMUST00000233775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025735	Rhbdl1	ENSMUST00000184865	ENSMUSP00000138927	TRANSLATION	protein_coding	stop	-	3	128	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025735	Rhbdl1	ENSMUST00000026831	ENSMUSP00000026831	TRANSLATION	protein_coding	-	CCDS28534.1	1	373	0	0	7.1	123.5	6	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025735	Rhbdl1	ENSMUST00000183929	ENSMUSP00000139046	TRANSLATION	protein_coding	-	-	5	369	0	0	0	98.8	6	-4,-5	-	-	4.518	MINOR
ENSMUSG00000090304	Vmn2r99	ENSMUST00000176107	ENSMUSP00000135236	TRANSLATION	protein_coding	-	CCDS57046.1	5	856	0	3.96	0.5	373.1	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000090304	Vmn2r99	ENSMUST00000231989	ENSMUSP00000156067	TRANSLATION	protein_coding	-	-	-	620	0	2.88	0	169	0	2,-3	-	-	3.84	MINOR
ENSMUSG00000071172	Srsf3	ENSMUST00000147265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071172	Srsf3	ENSMUST00000233010	ENSMUSP00000156504	TRANSLATION	nonsense_mediated_decay	start	-	-	11	0	0.198	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000071172	Srsf3	ENSMUST00000150157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071172	Srsf3	ENSMUST00000037776	ENSMUSP00000049025	TRANSLATION	nonsense_mediated_decay	-	-	1	124	0	1.998	0	65.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071172	Srsf3	ENSMUST00000130216	ENSMUSP00000117045	TRANSLATION	protein_coding	-	CCDS28590.1	1	164	0	1.8	17	65.8	0	-4,-5	-	-	15.406	PRINCIPAL:1
ENSMUSG00000071172	Srsf3	ENSMUST00000144551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071172	Srsf3	ENSMUST00000233105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071172	Srsf3	ENSMUST00000233885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071172	Srsf3	ENSMUST00000233127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071172	Srsf3	ENSMUST00000233209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043592	Unc5cl	ENSMUST00000161587	ENSMUSP00000124990	TRANSLATION	nonsense_mediated_decay	start	-	1	76	2	1.05	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043592	Unc5cl	ENSMUST00000162467	ENSMUSP00000125598	TRANSLATION	nonsense_mediated_decay	start	-	5	73	1	0.72	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043592	Unc5cl	ENSMUST00000162132	ENSMUSP00000124197	TRANSLATION	protein_coding	start	-	5	110	2	0.996	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043592	Unc5cl	ENSMUST00000161418	ENSMUSP00000125243	TRANSLATION	nonsense_mediated_decay	start	-	5	79	2	0.786	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043592	Unc5cl	ENSMUST00000074574	ENSMUSP00000074159	TRANSLATION	protein_coding	-	CCDS28870.1	1	518	2	3.3408	2.7	178.6	0	-3,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000043592	Unc5cl	ENSMUST00000162313	ENSMUSP00000125101	TRANSLATION	nonsense_mediated_decay	-	-	2	67	2	0.786	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000003628	ENSMUSP00000003628	TRANSLATION	protein_coding	-	CCDS28703.1	1	911	23	13.87	1.5	358.6	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000003534	Ddr1	ENSMUST00000145900	ENSMUSP00000122361	TRANSLATION	protein_coding	stop	-	2	221	0	5.08	0	75	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000134995	ENSMUSP00000117301	TRANSLATION	protein_coding	stop	-	3	264	3	6.41	0	75	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000117301	ENSMUSP00000112570	TRANSLATION	protein_coding	-	CCDS28703.1	1	911	23	13.87	1.5	358.6	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000003534	Ddr1	ENSMUST00000119825	ENSMUSP00000113062	TRANSLATION	protein_coding	-	CCDS28703.1	1	911	23	13.87	1.5	358.6	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000003534	Ddr1	ENSMUST00000155957	ENSMUSP00000117427	TRANSLATION	nonsense_mediated_decay	-	-	1	244	0	4.115	0	75	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000155628	ENSMUSP00000133659	TRANSLATION	protein_coding	stop	-	5	584	8	8.87	0	75	1	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000148065	ENSMUSP00000120635	TRANSLATION	protein_coding	stop	-	3	143	3	3.79	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000146472	ENSMUSP00000119397	TRANSLATION	protein_coding	stop	-	5	231	0	5.41	0	75	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000135078	ENSMUSP00000122191	TRANSLATION	protein_coding	stop	-	2	89	0	1.95	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000003534	Ddr1	ENSMUST00000097333	ENSMUSP00000094945	TRANSLATION	protein_coding	-	CCDS37603.1	1	874	23	13.87	1.5	358.6	1	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000003534	Ddr1	ENSMUST00000166980	ENSMUSP00000133047	TRANSLATION	protein_coding	-	CCDS28703.1	1	911	23	13.87	1.5	358.6	1	4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000024041	Cryaa	ENSMUST00000019192	ENSMUSP00000019192	TRANSLATION	protein_coding	-	CCDS37551.1	1	196	0	2.7	1.5	170.9	0	-4,-7	-	-	11.586	MINOR
ENSMUSG00000024041	Cryaa	ENSMUST00000228305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024041	Cryaa	ENSMUST00000227620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024041	Cryaa	ENSMUST00000228716	ENSMUSP00000154747	TRANSLATION	protein_coding	-	-	-	173	0	2.7	17.7	170.9	0	-4,-6	-	-	15.466	PRINCIPAL:1
ENSMUSG00000024041	Cryaa	ENSMUST00000226183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024041	Cryaa	ENSMUST00000228089	ENSMUSP00000157708	TRANSLATION	protein_coding	-	-	-	202	0	2.964	0.5	170.9	0	-4,-6	-	-	12	MINOR
ENSMUSG00000044533	Rps2	ENSMUST00000170715	ENSMUSP00000131474	TRANSLATION	protein_coding	-	CCDS37493.1	1	293	0	4.75	7.5	208.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044533	Rps2	ENSMUST00000129984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044533	Rps2	ENSMUST00000132803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044533	Rps2	ENSMUST00000152407	ENSMUSP00000114529	TRANSLATION	protein_coding	stop	-	5	269	0	4	0	208.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044533	Rps2	ENSMUST00000054289	ENSMUSP00000092502	TRANSLATION	protein_coding	-	CCDS37493.1	1	293	0	4.75	7.5	208.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000044533	Rps2	ENSMUST00000122809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044533	Rps2	ENSMUST00000146867	ENSMUSP00000120715	TRANSLATION	protein_coding	-	-	5	302	0	4	0	208.1	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000044533	Rps2	ENSMUST00000129580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037326	Capn15	ENSMUST00000212702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037326	Capn15	ENSMUST00000212735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037326	Capn15	ENSMUST00000212099	ENSMUSP00000148385	TRANSLATION	nonsense_mediated_decay	-	-	1	502	17	0	0	94.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037326	Capn15	ENSMUST00000212789	ENSMUSP00000148393	TRANSLATION	nonsense_mediated_decay	-	-	1	955	17	3.43	0	371	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037326	Capn15	ENSMUST00000212149	ENSMUSP00000148718	TRANSLATION	protein_coding	-	CCDS28540.1	5	1095	17	3.43	0.5	371	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000037326	Capn15	ENSMUST00000211917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037326	Capn15	ENSMUST00000212520	ENSMUSP00000148486	TRANSLATION	protein_coding	-	CCDS84286.1	1	1196	17	3.43	0.5	371	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000037326	Capn15	ENSMUST00000041641	ENSMUSP00000039528	TRANSLATION	protein_coding	-	CCDS28540.1	5	1095	17	3.43	0.5	371	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000048062	Fpr-rs4	ENSMUST00000095651	ENSMUSP00000093311	TRANSLATION	protein_coding	-	CCDS49968.1	-	323	0	0.48	1.5	116.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040327	Cul9	ENSMUST00000183078	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000066026	ENSMUSP00000067736	TRANSLATION	protein_coding	-	-	5	2520	16	7.155	0	317.5	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000040327	Cul9	ENSMUST00000182451	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000182315	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000183163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000183016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000183312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000182485	ENSMUSP00000138418	TRANSLATION	protein_coding	-	CCDS37636.2	5	2530	16	7.155	0.5	317.5	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000040327	Cul9	ENSMUST00000182799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000182530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040327	Cul9	ENSMUST00000182668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071073	Lrrc73	ENSMUST00000233543	ENSMUSP00000156631	TRANSLATION	nonsense_mediated_decay	-	-	-	188	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071073	Lrrc73	ENSMUST00000233692	ENSMUSP00000156533	TRANSLATION	protein_coding	-	CCDS50123.1	-	316	0	3.47	6.3	0	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000071073	Lrrc73	ENSMUST00000233341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071073	Lrrc73	ENSMUST00000095262	ENSMUSP00000092896	TRANSLATION	protein_coding	-	-	1	289	0	3.05	0	0	0	-4,-5	-	-	5.16	MINOR
ENSMUSG00000067928	Zfp760	ENSMUST00000073312	ENSMUSP00000073038	TRANSLATION	protein_coding	-	CCDS37465.1	1	666	67	1.1	0.5	292.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000051977	Prdm9	ENSMUST00000139911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051977	Prdm9	ENSMUST00000233295	ENSMUSP00000156841	TRANSLATION	protein_coding	-	CCDS49963.1	-	847	56	3.95	0.5	394.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051977	Prdm9	ENSMUST00000128267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051977	Prdm9	ENSMUST00000132675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051977	Prdm9	ENSMUST00000167994	ENSMUSP00000131871	TRANSLATION	protein_coding	-	-	1	843	52	3.95	0	394.3	0	-4,-5	-	-	15.336	MINOR
ENSMUSG00000051977	Prdm9	ENSMUST00000147532	ENSMUSP00000118454	TRANSLATION	protein_coding	-	-	1	283	5	3.35	0	90.2	0	-4,-5	-	-	4.8	MINOR
ENSMUSG00000051977	Prdm9	ENSMUST00000130297	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000191340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000190136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000188064	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000185400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000189734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034709	Ppp1r21	ENSMUST00000038551	ENSMUSP00000048443	TRANSLATION	protein_coding	-	CCDS29023.1	1	780	0	0	5.1	1019.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000023913	Pla2g7	ENSMUST00000169694	ENSMUSP00000132027	TRANSLATION	protein_coding	stop	-	1	298	6	7.41	0	390.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023913	Pla2g7	ENSMUST00000165706	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023913	Pla2g7	ENSMUST00000024706	ENSMUSP00000024706	TRANSLATION	protein_coding	-	CCDS28796.1	1	440	7	10.41	1.5	584.1	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000023913	Pla2g7	ENSMUST00000167214	ENSMUSP00000130404	TRANSLATION	protein_coding	stop	-	5	211	3	4.75	0	239.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023913	Pla2g7	ENSMUST00000167418	ENSMUSP00000131898	TRANSLATION	protein_coding	stop	-	3	122	0	2	0	87.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000023913	Pla2g7	ENSMUST00000163489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003200	Sh3gl1	ENSMUST00000233803	ENSMUSP00000156570	TRANSLATION	protein_coding	-	-	-	247	0	6	0.5	265.1	0	-4,-6	-	-	5.994	MINOR
ENSMUSG00000003200	Sh3gl1	ENSMUST00000003268	ENSMUSP00000003268	TRANSLATION	protein_coding	-	CCDS28891.1	1	368	0	7.5	13.7	315.2	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000003200	Sh3gl1	ENSMUST00000233034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034265	Zdhhc14	ENSMUST00000089185	ENSMUSP00000086589	TRANSLATION	protein_coding	-	CCDS37422.1	1	489	4	0	8.8	127.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000039414	Heatr5b	ENSMUST00000232917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039414	Heatr5b	ENSMUST00000233073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039414	Heatr5b	ENSMUST00000233850	ENSMUSP00000156531	TRANSLATION	protein_coding	-	-	-	648	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039414	Heatr5b	ENSMUST00000097281	ENSMUSP00000094882	TRANSLATION	protein_coding	-	CCDS37697.1	5	2070	0	0	5.3	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000039414	Heatr5b	ENSMUST00000232947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039414	Heatr5b	ENSMUST00000232944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037098	Rab11fip3	ENSMUST00000120691	ENSMUSP00000112875	TRANSLATION	protein_coding	-	CCDS50040.1	1	1047	3	2	0.5	71	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000037098	Rab11fip3	ENSMUST00000144587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037098	Rab11fip3	ENSMUST00000148021	ENSMUSP00000119626	TRANSLATION	protein_coding	-	CCDS50039.1	3	444	0	2	0.5	71	0	-4,-5	-	-	12	MINOR
ENSMUSG00000037098	Rab11fip3	ENSMUST00000122103	ENSMUSP00000113521	TRANSLATION	protein_coding	-	CCDS50041.1	1	1092	3	2	0.5	71	0	-4,-5	-	-	15	PRINCIPAL:4
ENSMUSG00000037098	Rab11fip3	ENSMUST00000118828	ENSMUSP00000113048	TRANSLATION	protein_coding	-	CCDS50039.1	1	444	0	2	0.5	71	0	-4,-5	-	-	12	MINOR
ENSMUSG00000037098	Rab11fip3	ENSMUST00000126306	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043683	Fem1a	ENSMUST00000060253	ENSMUSP00000057996	TRANSLATION	protein_coding	-	CCDS28899.1	-	654	0	0.2	1.5	161.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036775	Decr2	ENSMUST00000237875	ENSMUSP00000157417	TRANSLATION	protein_coding	-	-	-	232	29	6.19	0	83.7	0	-4,-6	-	-	4.014	MINOR
ENSMUSG00000036775	Decr2	ENSMUST00000123056	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036775	Decr2	ENSMUST00000150534	ENSMUSP00000158163	TRANSLATION	protein_coding	-	-	3	268	33	7.19	0	105	0	-4,-2	-	-	9.288	MINOR
ENSMUSG00000036775	Decr2	ENSMUST00000236268	ENSMUSP00000158287	TRANSLATION	protein_coding	-	-	-	257	31	7.33	0	108.9	0	-4,-5	-	-	8.472	MINOR
ENSMUSG00000036775	Decr2	ENSMUST00000235318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036775	Decr2	ENSMUST00000236614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036775	Decr2	ENSMUST00000040907	ENSMUSP00000045621	TRANSLATION	protein_coding	-	CCDS28543.1	1	292	39	8.33	3.9	145.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000036775	Decr2	ENSMUST00000237265	ENSMUSP00000157435	TRANSLATION	protein_coding	-	-	-	351	39	7.33	0	145.5	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000036775	Decr2	ENSMUST00000137672	ENSMUSP00000157437	TRANSLATION	nonsense_mediated_decay	-	-	2	76	6	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024309	Pfdn6	ENSMUST00000174426	ENSMUSP00000134069	TRANSLATION	protein_coding	-	-	2	101	0	0	0	77.8	0	-4,-5	-	-	5.136	MINOR
ENSMUSG00000024309	Pfdn6	ENSMUST00000173678	ENSMUSP00000156997	TRANSLATION	protein_coding	-	-	2	87	0	0	2	69.7	0	-4,-5	-	-	5.064	MINOR
ENSMUSG00000024309	Pfdn6	ENSMUST00000173363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024309	Pfdn6	ENSMUST00000179418	ENSMUSP00000137072	TRANSLATION	protein_coding	-	CCDS28636.1	3	127	0	0	7.5	90.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024309	Pfdn6	ENSMUST00000025163	ENSMUSP00000025163	TRANSLATION	protein_coding	-	CCDS28636.1	1	127	0	0	7.5	90.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024309	Pfdn6	ENSMUST00000174048	ENSMUSP00000133656	TRANSLATION	protein_coding	-	CCDS28636.1	2	127	0	0	7.5	90.9	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000023914	Mep1a	ENSMUST00000024707	ENSMUSP00000024707	TRANSLATION	protein_coding	-	CCDS37623.1	1	760	9	7.46	0.5	388.6	1	1,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000023914	Mep1a	ENSMUST00000152155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023914	Mep1a	ENSMUST00000130964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023914	Mep1a	ENSMUST00000117137	ENSMUSP00000113838	TRANSLATION	protein_coding	-	-	1	747	9	7.46	1	388.6	1	1,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000047150	1700001C19Rik	ENSMUST00000073143	ENSMUSP00000072887	TRANSLATION	protein_coding	-	CCDS84317.1	2	113	0	0	2.9	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000047150	1700001C19Rik	ENSMUST00000125507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047150	1700001C19Rik	ENSMUST00000061885	ENSMUSP00000050873	TRANSLATION	protein_coding	-	CCDS28849.1	1	210	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000047150	1700001C19Rik	ENSMUST00000160678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093922	Rpl36-ps4	ENSMUST00000179601	ENSMUSP00000135946	TRANSLATION	protein_coding	start	-	5	117	0	0	0	68.5	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000024112	Cacna1h	ENSMUST00000159331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024112	Cacna1h	ENSMUST00000159610	ENSMUSP00000125541	TRANSLATION	protein_coding	-	-	1	2359	0	12.554	1.5	868.7	12	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024112	Cacna1h	ENSMUST00000159048	ENSMUSP00000123741	TRANSLATION	protein_coding	-	-	1	1901	0	12.554	0	858.8	12	-4,-7	-	-	11.406	ALTERNATIVE:2
ENSMUSG00000024112	Cacna1h	ENSMUST00000162820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024112	Cacna1h	ENSMUST00000159052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024112	Cacna1h	ENSMUST00000161035	ENSMUSP00000123906	TRANSLATION	protein_coding	start/stop	-	3	293	0	2.624	0	88.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024112	Cacna1h	ENSMUST00000161454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024112	Cacna1h	ENSMUST00000078496	ENSMUSP00000077586	TRANSLATION	protein_coding	-	CCDS37501.1	1	2359	0	12.554	1.5	868.7	12	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024112	Cacna1h	ENSMUST00000159623	ENSMUSP00000125664	TRANSLATION	protein_coding	stop	-	5	147	0	0	0	26.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024112	Cacna1h	ENSMUST00000161658	ENSMUSP00000124883	TRANSLATION	nonsense_mediated_decay	start	-	2	49	0	1.514	0	29.4	2	0,-3	-	-	-1	MINOR
ENSMUSG00000116780	Gm3417	ENSMUST00000231584	ENSMUSP00000155901	TRANSLATION	protein_coding	-	-	-	139	0	0	1.5	40	0	-4,-7	-	-	3.246	MINOR
ENSMUSG00000116780	Gm3417	ENSMUST00000232173	ENSMUSP00000156122	TRANSLATION	protein_coding	-	-	-	132	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000116780	Gm3417	ENSMUST00000097399	ENSMUSP00000095011	TRANSLATION	protein_coding	-	CCDS49959.1	1	191	0	0	1.5	74	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094441	Zfp955a	ENSMUST00000008830	ENSMUSP00000008830	TRANSLATION	protein_coding	-	CCDS50066.1	1	545	44	1.4	0.5	186.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024034	Tmprss3	ENSMUST00000237740	ENSMUSP00000158320	TRANSLATION	protein_coding	-	-	-	451	10	5.5	6.3	349	2	-4,-7	-	-	20	ALTERNATIVE:1
ENSMUSG00000024034	Tmprss3	ENSMUST00000236793	ENSMUSP00000158048	TRANSLATION	protein_coding	-	CCDS37547.1	-	453	10	5.5	6.3	349	2	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000024034	Tmprss3	ENSMUST00000024833	ENSMUSP00000024833	TRANSLATION	protein_coding	-	CCDS37547.1	1	453	10	5.5	6.3	349	2	-4,-6	-	-	20	PRINCIPAL:2
ENSMUSG00000024034	Tmprss3	ENSMUST00000114549	ENSMUSP00000110196	TRANSLATION	protein_coding	-	CCDS50053.1	1	475	10	5.5	0.5	349	2	-4,-5	-	-	18	MINOR
ENSMUSG00000109212	Olfr126	ENSMUST00000174139	ENSMUSP00000134080	TRANSLATION	protein_coding	-	CCDS28768.1	-	319	0	0.36	0.5	153.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109212	Olfr126	ENSMUST00000217487	ENSMUSP00000151205	TRANSLATION	protein_coding	-	CCDS28768.1	5	319	0	0.36	0.5	153.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000109212	Olfr126	ENSMUST00000213844	ENSMUSP00000149896	TRANSLATION	protein_coding	-	CCDS28768.1	5	319	0	0.36	0.5	153.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024164	C3	ENSMUST00000177425	ENSMUSP00000135663	TRANSLATION	protein_coding	start	-	3	102	4	2.83	0	37.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024164	C3	ENSMUST00000024988	ENSMUSP00000024988	TRANSLATION	protein_coding	-	CCDS37670.1	1	1663	6	38.61	0.5	740.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024164	C3	ENSMUST00000176457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024164	C3	ENSMUST00000177046	ENSMUSP00000135560	TRANSLATION	protein_coding	start/stop	-	5	185	0	5.2	0	76.8	0	2,-4	-	-	-1	MINOR
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000002572	ENSMUSP00000002572	TRANSLATION	protein_coding	-	CCDS28488.1	1	337	0	6.095	7.5	222.8	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000235042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000234912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000234557	ENSMUSP00000157103	TRANSLATION	protein_coding	-	-	-	316	0	5.78	2.9	218.5	0	-4,-2	-	-	11.988	MINOR
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000019684	ENSMUSP00000019684	TRANSLATION	protein_coding	-	CCDS28489.1	1	226	0	4.265	1.5	165	0	-4,-2	-	-	5.103	MINOR
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000234121	ENSMUSP00000157037	TRANSLATION	protein_coding	-	-	-	231	0	4.095	0	165	0	-4,-5	-	-	4.53	MINOR
ENSMUSG00000002504	Slc9a3r2	ENSMUST00000234505	ENSMUSP00000157065	TRANSLATION	protein_coding	-	-	-	205	0	3.95	0	160.7	0	-4,-2	-	-	3.984	MINOR
ENSMUSG00000002500	Rpl3l	ENSMUST00000183214	ENSMUSP00000138489	TRANSLATION	protein_coding	stop	-	3	133	0	3	0	184.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002500	Rpl3l	ENSMUST00000170239	ENSMUSP00000129325	TRANSLATION	protein_coding	-	CCDS50019.1	5	407	0	8.9	6.3	582.5	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000002500	Rpl3l	ENSMUST00000045186	ENSMUSP00000038326	TRANSLATION	protein_coding	-	CCDS37494.1	1	240	0	5.4	0.5	313.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000233921	ENSMUSP00000156934	TRANSLATION	protein_coding	start	-	-	108	4	2	0	142.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000041819	ENSMUSP00000049070	TRANSLATION	protein_coding	-	CCDS28578.1	1	543	5	5.83	1.5	290.3	0	-4,-5	-	-	16.998	PRINCIPAL:2
ENSMUSG00000037446	Tulp1	ENSMUST00000142143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037446	Tulp1	ENSMUST00000125876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037446	Tulp1	ENSMUST00000131604	ENSMUSP00000156761	TRANSLATION	nonsense_mediated_decay	start	-	3	144	1	2	0	65	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000233420	ENSMUSP00000156826	TRANSLATION	protein_coding	-	-	-	492	5	5.83	0	290.3	0	-4,-5	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000037446	Tulp1	ENSMUST00000150341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037446	Tulp1	ENSMUST00000123797	ENSMUSP00000116588	TRANSLATION	protein_coding	start	-	3	256	6	4.83	0	213.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000129375	ENSMUSP00000121444	TRANSLATION	nonsense_mediated_decay	start	-	2	42	0	1	0	37	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000114794	ENSMUSP00000110442	TRANSLATION	protein_coding	-	-	1	486	1	3.83	0	134.1	0	-4,-5	-	-	3	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000140250	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037446	Tulp1	ENSMUST00000146493	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037446	Tulp1	ENSMUST00000148188	ENSMUSP00000116844	TRANSLATION	protein_coding	-	-	1	122	4	2.5	0	153.5	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000037446	Tulp1	ENSMUST00000130877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024079	Eif2ak2	ENSMUST00000024884	ENSMUSP00000024884	TRANSLATION	protein_coding	-	CCDS28980.1	1	515	16	11	0.5	279.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024079	Eif2ak2	ENSMUST00000171451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024079	Eif2ak2	ENSMUST00000169940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024079	Eif2ak2	ENSMUST00000171852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045744	Bricd5	ENSMUST00000054946	ENSMUSP00000059792	TRANSLATION	protein_coding	-	CCDS28483.1	1	174	0	0	0.5	77.2	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000045744	Bricd5	ENSMUST00000164508	ENSMUSP00000130417	TRANSLATION	protein_coding	-	CCDS28483.1	1	174	0	0	0.5	77.2	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000045744	Bricd5	ENSMUST00000238986	ENSMUSP00000159026	TRANSLATION	protein_coding	-	-	-	225	0	0	0	77.2	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024220	Zfp523	ENSMUST00000161275	ENSMUSP00000156758	TRANSLATION	nonsense_mediated_decay	-	-	1	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000233841	ENSMUSP00000156865	TRANSLATION	nonsense_mediated_decay	-	-	-	342	24	4.43	0	100.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000232845	ENSMUSP00000156739	TRANSLATION	nonsense_mediated_decay	start	-	-	258	20	4.35	0	100.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000002318	ENSMUSP00000002318	TRANSLATION	protein_coding	-	CCDS28573.1	1	568	27	5.51	3.9	137.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000024220	Zfp523	ENSMUST00000233021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024220	Zfp523	ENSMUST00000145313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024220	Zfp523	ENSMUST00000233904	ENSMUSP00000156435	TRANSLATION	protein_coding	-	-	-	513	27	5.51	2.4	137.6	0	-4,-5	-	-	18.483	ALTERNATIVE:2
ENSMUSG00000024220	Zfp523	ENSMUST00000151595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024220	Zfp523	ENSMUST00000155030	ENSMUSP00000117730	TRANSLATION	protein_coding	start/stop	-	3	189	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000233458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024220	Zfp523	ENSMUST00000073534	ENSMUSP00000073226	TRANSLATION	protein_coding	-	CCDS28573.1	5	568	27	5.51	3.9	137.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000024220	Zfp523	ENSMUST00000133868	ENSMUSP00000123127	TRANSLATION	protein_coding	start/stop	-	5	292	23	4.51	0	121.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000129522	ENSMUSP00000125689	TRANSLATION	nonsense_mediated_decay	start	-	5	189	7	1.16	0	37.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024220	Zfp523	ENSMUST00000233613	ENSMUSP00000156638	TRANSLATION	protein_coding	-	CCDS28573.1	-	568	27	5.51	3.9	137.6	0	-4,-5	-	-	19	PRINCIPAL:2
ENSMUSG00000024066	Xdh	ENSMUST00000233621	ENSMUSP00000156944	TRANSLATION	nonsense_mediated_decay	-	-	-	44	0	1.448	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024066	Xdh	ENSMUST00000233352	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000233449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000233392	ENSMUSP00000156860	TRANSLATION	protein_coding	start	-	-	409	6	9.55	0	353.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024066	Xdh	ENSMUST00000233570	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000233946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000232783	ENSMUSP00000156753	TRANSLATION	nonsense_mediated_decay	start	-	-	40	0	1.448	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024066	Xdh	ENSMUST00000233807	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024066	Xdh	ENSMUST00000232957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024066	Xdh	ENSMUST00000232717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000024866	ENSMUSP00000024866	TRANSLATION	protein_coding	-	CCDS28967.1	1	1335	93	32	0.5	1201.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024066	Xdh	ENSMUST00000233433	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024066	Xdh	ENSMUST00000233162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024066	Xdh	ENSMUST00000232843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036036	Zfp57	ENSMUST00000172540	ENSMUSP00000134024	TRANSLATION	protein_coding	stop	-	2	150	7	1.65	0	72.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000172580	ENSMUSP00000133894	TRANSLATION	protein_coding	stop	-	3	160	9	2	0	94.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000173921	ENSMUSP00000133582	TRANSLATION	protein_coding	stop	-	5	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000069250	ENSMUSP00000065811	TRANSLATION	protein_coding	-	CCDS28733.1	1	421	20	2.85	0.5	117.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000036036	Zfp57	ENSMUST00000174470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036036	Zfp57	ENSMUST00000089968	ENSMUSP00000087414	TRANSLATION	protein_coding	-	CCDS50106.1	1	418	20	2.85	0.5	117.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000036036	Zfp57	ENSMUST00000172527	ENSMUSP00000134116	TRANSLATION	protein_coding	stop	-	5	62	0	1.25	0	72.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000174672	ENSMUSP00000133821	TRANSLATION	protein_coding	-	CCDS28733.1	1	421	20	2.85	0.5	117.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000036036	Zfp57	ENSMUST00000174747	ENSMUSP00000133460	TRANSLATION	protein_coding	stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000174524	ENSMUSP00000134418	TRANSLATION	protein_coding	-	CCDS28733.1	1	421	20	2.85	0.5	117.9	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000036036	Zfp57	ENSMUST00000173588	ENSMUSP00000135655	TRANSLATION	protein_coding	stop	-	3	146	12	2	0	44.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036036	Zfp57	ENSMUST00000172502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036036	Zfp57	ENSMUST00000174016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000155016	ENSMUSP00000122896	TRANSLATION	protein_coding	-	CCDS28953.1	1	992	0	2.68	1.5	513.7	0	-4,-7	-	-	12.188	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000140728	ENSMUSP00000117358	TRANSLATION	protein_coding	-	CCDS84333.1	5	692	0	2.68	6.3	513.7	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000003279	Dlgap1	ENSMUST00000060072	ENSMUSP00000052858	TRANSLATION	protein_coding	-	CCDS84332.1	1	982	0	2.68	1.5	513.7	0	-4,-7	-	-	12.188	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000155823	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000233780	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000133983	ENSMUSP00000116716	TRANSLATION	protein_coding	-	CCDS84332.1	1	982	0	2.68	1.5	513.7	0	-4,-7	-	-	12.188	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000097288	ENSMUSP00000094890	TRANSLATION	protein_coding	-	CCDS50173.1	1	636	0	2.6	0.5	378.1	0	-4,-6	-	-	5.82	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000146730	ENSMUSP00000116072	TRANSLATION	protein_coding	-	-	1	944	0	2.6	0	378.1	0	-4,-7	-	-	5.82	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000233283	ENSMUSP00000156863	TRANSLATION	protein_coding	-	-	-	660	0	2.68	4.1	513.7	0	-4,-7	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000003279	Dlgap1	ENSMUST00000232998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003279	Dlgap1	ENSMUST00000130971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000148486	ENSMUSP00000122337	TRANSLATION	protein_coding	-	CCDS50172.1	1	682	0	2.68	6.3	513.7	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000003279	Dlgap1	ENSMUST00000150260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000156946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000233173	ENSMUSP00000156778	TRANSLATION	protein_coding	start	-	-	726	0	2.6	0	378.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000133717	ENSMUSP00000122370	TRANSLATION	protein_coding	-	CCDS84334.1	5	666	0	2.68	0.5	513.7	0	-4,-6	-	-	12	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000150798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000126801	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003279	Dlgap1	ENSMUST00000135938	ENSMUSP00000118497	TRANSLATION	protein_coding	-	CCDS84331.1	1	964	0	2.68	0.5	513.7	0	-4,-7	-	-	12	MINOR
ENSMUSG00000003279	Dlgap1	ENSMUST00000125691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038048	Cntnap5c	ENSMUST00000076038	ENSMUSP00000075416	TRANSLATION	protein_coding	-	CCDS37671.1	2	1305	0	9.27	1.5	380.4	0	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000058435	Btnl4	ENSMUST00000236448	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058435	Btnl4	ENSMUST00000065841	ENSMUSP00000064161	TRANSLATION	protein_coding	-	CCDS50077.1	5	586	0	3.17	0.5	126.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000095687	Rnaset2a	ENSMUST00000097420	ENSMUSP00000095031	TRANSLATION	protein_coding	-	CCDS37433.1	1	259	11	5.75	1.5	204.8	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000095687	Rnaset2a	ENSMUST00000231927	ENSMUSP00000156083	TRANSLATION	protein_coding	-	CCDS37433.1	-	259	11	5.75	1.5	204.8	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000023800	Tiam2	ENSMUST00000072156	ENSMUSP00000072020	TRANSLATION	protein_coding	-	CCDS37421.1	1	1715	5	14.1	0.5	240.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000023800	Tiam2	ENSMUST00000226748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023800	Tiam2	ENSMUST00000226905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023800	Tiam2	ENSMUST00000169838	ENSMUSP00000125842	TRANSLATION	protein_coding	-	CCDS37421.1	1	1715	5	14.1	0.5	240.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000023800	Tiam2	ENSMUST00000227604	ENSMUSP00000154627	TRANSLATION	protein_coding	stop	-	-	177	0	3.88	0	84.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023800	Tiam2	ENSMUST00000226997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023800	Tiam2	ENSMUST00000226913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023800	Tiam2	ENSMUST00000226434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023800	Tiam2	ENSMUST00000227405	ENSMUSP00000154598	TRANSLATION	nonsense_mediated_decay	start	-	-	142	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000233701	ENSMUSP00000156455	TRANSLATION	protein_coding	-	-	-	1105	18	4.13	0.5	375.7	0	-4,-2	-	-	8.556	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000233520	ENSMUSP00000156581	TRANSLATION	protein_coding	stop	-	-	50	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000140587	ENSMUSP00000156521	TRANSLATION	protein_coding	-	-	3	140	0	3.33	0	57.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000156029	ENSMUSP00000156780	TRANSLATION	protein_coding	start	-	1	650	0	4.66	0	117.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000148149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063952	Brpf3	ENSMUST00000144022	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063952	Brpf3	ENSMUST00000126868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063952	Brpf3	ENSMUST00000232940	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063952	Brpf3	ENSMUST00000233088	ENSMUSP00000156480	TRANSLATION	protein_coding	-	-	-	140	0	3.33	0	57.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000140973	ENSMUSP00000156657	TRANSLATION	nonsense_mediated_decay	start	-	1	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000232705	ENSMUSP00000156836	TRANSLATION	nonsense_mediated_decay	-	-	-	625	18	2.8	0.5	292.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000232997	ENSMUSP00000156622	TRANSLATION	nonsense_mediated_decay	start	-	-	597	18	2.8	0	292.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000127007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063952	Brpf3	ENSMUST00000233646	ENSMUSP00000156825	TRANSLATION	protein_coding	-	-	-	934	18	7.46	0	433.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000063952	Brpf3	ENSMUST00000233182	ENSMUSP00000156937	TRANSLATION	protein_coding	stop	-	-	31	0	0.566	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000004985	ENSMUSP00000004985	TRANSLATION	protein_coding	-	CCDS37532.1	1	1204	18	7.46	0.5	433.1	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000063952	Brpf3	ENSMUST00000233561	ENSMUSP00000156584	TRANSLATION	protein_coding	-	-	-	870	18	7.13	0	433.1	0	-4,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000063952	Brpf3	ENSMUST00000136233	ENSMUSP00000156420	TRANSLATION	protein_coding	stop	-	3	118	0	1	0	25.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063952	Brpf3	ENSMUST00000233709	ENSMUSP00000156740	TRANSLATION	nonsense_mediated_decay	-	-	-	792	18	4.13	0	375.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096169	Olfr1564	ENSMUST00000215450	ENSMUSP00000150573	TRANSLATION	protein_coding	-	-	5	315	0	0.4	5.4	179.4	8	-2,-5	-	-	14.001	ALTERNATIVE:1
ENSMUSG00000096169	Olfr1564	ENSMUST00000213642	ENSMUSP00000150517	TRANSLATION	protein_coding	-	-	5	315	0	0.4	5.4	179.4	8	-2,-5	-	-	14.001	ALTERNATIVE:1
ENSMUSG00000096169	Olfr1564	ENSMUST00000112162	ENSMUSP00000127247	TRANSLATION	protein_coding	-	CCDS57062.1	-	318	0	0.4	7.6	179.4	8	-2,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000096169	Olfr1564	ENSMUST00000208645	ENSMUSP00000146792	TRANSLATION	protein_coding	-	-	5	315	0	0.4	5.4	179.4	8	-2,-5	-	-	14.001	ALTERNATIVE:1
ENSMUSG00000096169	Olfr1564	ENSMUST00000213751	ENSMUSP00000150267	TRANSLATION	protein_coding	-	-	5	315	0	0.4	5.4	179.4	8	-2,-5	-	-	14.001	ALTERNATIVE:1
ENSMUSG00000090747	Esp8	ENSMUST00000171813	ENSMUSP00000129933	TRANSLATION	protein_coding	-	CCDS57092.1	1	149	0	0	0.5	107.1	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000040694	Apobec2	ENSMUST00000046549	ENSMUSP00000047402	TRANSLATION	protein_coding	-	CCDS28868.1	1	224	5	1	7.6	174.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000040694	Apobec2	ENSMUST00000233707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006705	Pknox1	ENSMUST00000176701	ENSMUSP00000135804	TRANSLATION	protein_coding	-	CCDS28608.1	1	436	0	2.35	14.8	195.6	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000006705	Pknox1	ENSMUST00000237887	ENSMUSP00000158053	TRANSLATION	nonsense_mediated_decay	start	-	-	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000235255	ENSMUSP00000157874	TRANSLATION	protein_coding	-	-	-	325	0	2.35	0	150.5	0	-4,-7	-	-	9.294	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000235869	ENSMUSP00000157430	TRANSLATION	protein_coding	stop	-	-	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000097352	ENSMUSP00000094966	TRANSLATION	protein_coding	-	CCDS28608.1	1	436	0	2.35	14.8	195.6	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000006705	Pknox1	ENSMUST00000237748	ENSMUSP00000158343	TRANSLATION	protein_coding	-	-	-	324	0	2.35	0	150.5	0	-4,-7	-	-	9.294	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000235401	ENSMUSP00000157459	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000175812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006705	Pknox1	ENSMUST00000237248	ENSMUSP00000157748	TRANSLATION	protein_coding	-	-	-	435	0	2.35	12.8	195.6	0	-4,-6	-	-	15.42	ALTERNATIVE:1
ENSMUSG00000006705	Pknox1	ENSMUST00000236493	ENSMUSP00000157897	TRANSLATION	protein_coding	-	-	-	323	0	2.35	0	150.5	0	-4,-7	-	-	9.294	MINOR
ENSMUSG00000006705	Pknox1	ENSMUST00000175806	ENSMUSP00000134852	TRANSLATION	protein_coding	-	CCDS28608.1	1	436	0	2.35	14.8	195.6	0	-4,-6	-	-	16	PRINCIPAL:2
ENSMUSG00000006705	Pknox1	ENSMUST00000176895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006705	Pknox1	ENSMUST00000176513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006705	Pknox1	ENSMUST00000237038	ENSMUSP00000157491	TRANSLATION	protein_coding	-	-	-	325	0	2.35	0	150.5	0	-4,-7	-	-	9.294	MINOR
ENSMUSG00000067150	Xpo5	ENSMUST00000233340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067150	Xpo5	ENSMUST00000232971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067150	Xpo5	ENSMUST00000087031	ENSMUSP00000084257	TRANSLATION	protein_coding	-	CCDS37631.1	1	1204	0	29.08	5.1	110.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000024228	Nudt12	ENSMUST00000025065	ENSMUSP00000025065	TRANSLATION	protein_coding	-	CCDS28933.1	1	462	4	2.88	2.7	176.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024228	Nudt12	ENSMUST00000174108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024228	Nudt12	ENSMUST00000174122	ENSMUSP00000133678	TRANSLATION	protein_coding	-	-	1	367	4	1.84	0	115.3	0	-4,-6	-	-	10.174	MINOR
ENSMUSG00000055660	Mettl4	ENSMUST00000234593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055660	Mettl4	ENSMUST00000234990	ENSMUSP00000157180	TRANSLATION	protein_coding	-	CCDS29030.1	-	471	2	0	2.7	136.7	0	-4,-6	-	-	8	PRINCIPAL:2
ENSMUSG00000055660	Mettl4	ENSMUST00000171284	ENSMUSP00000127142	TRANSLATION	protein_coding	-	-	1	450	2	0	1.5	136.7	0	-4,-6	-	-	8	ALTERNATIVE:2
ENSMUSG00000063994	Olfr120	ENSMUST00000077498	ENSMUSP00000094931	TRANSLATION	protein_coding	-	CCDS28762.1	-	330	0	0.42	0.5	198.4	7	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000063994	Olfr120	ENSMUST00000207771	ENSMUSP00000146861	TRANSLATION	protein_coding	-	-	2	321	0	0.42	3.9	198.4	7	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000002833	Hdgfl2	ENSMUST00000224078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002833	Hdgfl2	ENSMUST00000225342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000224172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000224701	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000226035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000225208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000226053	ENSMUSP00000152948	TRANSLATION	protein_coding	-	CCDS28894.1	-	669	0	5.3	0.5	150.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000002833	Hdgfl2	ENSMUST00000224655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000225731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002833	Hdgfl2	ENSMUST00000225843	ENSMUSP00000153249	TRANSLATION	protein_coding	-	-	-	678	0	5.3	0.5	150.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002833	Hdgfl2	ENSMUST00000002911	ENSMUSP00000002911	TRANSLATION	protein_coding	-	-	1	667	0	5.3	0.5	150.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000002833	Hdgfl2	ENSMUST00000224101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061336	Olfr116	ENSMUST00000216128	ENSMUSP00000150977	TRANSLATION	protein_coding	-	CCDS28758.1	5	321	0	0.28	0.5	153.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061336	Olfr116	ENSMUST00000072265	ENSMUSP00000072115	TRANSLATION	protein_coding	-	CCDS28758.1	-	321	0	0.28	0.5	153.9	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000001525	Tubb5	ENSMUST00000173253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001525	Tubb5	ENSMUST00000156050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001525	Tubb5	ENSMUST00000001566	ENSMUSP00000001566	TRANSLATION	protein_coding	-	CCDS28706.1	1	444	19	4.75	19.5	375.5	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000001525	Tubb5	ENSMUST00000134978	ENSMUSP00000134598	TRANSLATION	protein_coding	stop	-	3	66	2	1.75	0	61.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067186	Olfr132	ENSMUST00000087128	ENSMUSP00000084368	TRANSLATION	protein_coding	-	CCDS28775.1	-	313	0	0.32	2.7	155.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067186	Olfr132	ENSMUST00000217361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067186	Olfr132	ENSMUST00000216804	ENSMUSP00000149593	TRANSLATION	protein_coding	-	CCDS28775.1	5	313	0	0.32	2.7	155.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000001228	Uhrf1	ENSMUST00000113038	ENSMUSP00000108661	TRANSLATION	protein_coding	-	CCDS50151.1	1	774	20	15.2	0.5	483.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000001228	Uhrf1	ENSMUST00000139654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001228	Uhrf1	ENSMUST00000113035	ENSMUSP00000108658	TRANSLATION	protein_coding	-	CCDS50151.1	1	774	20	15.2	0.5	483.8	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000001228	Uhrf1	ENSMUST00000001258	ENSMUSP00000001258	TRANSLATION	protein_coding	-	CCDS28903.1	1	782	20	15.035	1.5	483.8	0	-4,-6	-	-	17.67	PRINCIPAL:3
ENSMUSG00000001228	Uhrf1	ENSMUST00000113039	ENSMUSP00000108662	TRANSLATION	protein_coding	-	CCDS28903.1	1	782	20	15.035	1.5	483.8	0	-4,-6	-	-	17.67	PRINCIPAL:3
ENSMUSG00000001228	Uhrf1	ENSMUST00000142387	ENSMUSP00000125830	TRANSLATION	protein_coding	stop	-	3	146	0	1.6	0	68	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001228	Uhrf1	ENSMUST00000137876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002250	Ppard	ENSMUST00000142226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002250	Ppard	ENSMUST00000169040	ENSMUSP00000133077	TRANSLATION	protein_coding	stop	-	3	252	8	4	0	97.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002250	Ppard	ENSMUST00000233761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002250	Ppard	ENSMUST00000123020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002250	Ppard	ENSMUST00000233383	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002250	Ppard	ENSMUST00000144200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002250	Ppard	ENSMUST00000166744	ENSMUSP00000156734	TRANSLATION	protein_coding	-	-	5	382	8	6	0	162	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000002250	Ppard	ENSMUST00000002320	ENSMUSP00000002320	TRANSLATION	protein_coding	-	CCDS28575.1	1	440	8	6	1.5	162	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000002250	Ppard	ENSMUST00000232879	ENSMUSP00000156879	TRANSLATION	protein_coding	-	-	-	342	0	4	0	65.4	0	-4,-5	-	-	2.202	MINOR
ENSMUSG00000024038	Ndufv3	ENSMUST00000046288	ENSMUSP00000049000	TRANSLATION	protein_coding	-	CCDS37549.1	1	468	0	1	0.5	59.4	0	-4,0	-	-	12	PRINCIPAL:4
ENSMUSG00000024038	Ndufv3	ENSMUST00000189436	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024038	Ndufv3	ENSMUST00000185273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024038	Ndufv3	ENSMUST00000191598	ENSMUSP00000140032	TRANSLATION	protein_coding	-	-	1	86	0	0	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000024038	Ndufv3	ENSMUST00000064798	ENSMUSP00000066303	TRANSLATION	protein_coding	-	CCDS37550.1	1	104	0	1	0.5	59.4	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000037689	Tmem247	ENSMUST00000202221	ENSMUSP00000143825	TRANSLATION	protein_coding	start/stop	-	2	123	0	0	0	231.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000037689	Tmem247	ENSMUST00000042172	ENSMUSP00000039338	TRANSLATION	protein_coding	stop	CCDS79579.1	1	211	0	0	1.5	386.5	0	-4,-5	-	-	-1	PRINCIPAL:2
ENSMUSG00000023965	Fbxl17	ENSMUST00000112840	ENSMUSP00000108459	TRANSLATION	protein_coding	-	-	1	220	0	1.905	0	15.1	0	-4,-5	-	-	4.686	MINOR
ENSMUSG00000023965	Fbxl17	ENSMUST00000169134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023965	Fbxl17	ENSMUST00000090318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023965	Fbxl17	ENSMUST00000112839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023965	Fbxl17	ENSMUST00000024761	ENSMUSP00000024761	TRANSLATION	protein_coding	-	CCDS50162.1	1	701	0	3.305	0.5	60.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073380	Arrdc5	ENSMUST00000233911	ENSMUSP00000156666	TRANSLATION	protein_coding	-	-	-	131	0	0	0	26.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000073380	Arrdc5	ENSMUST00000097303	ENSMUSP00000094906	TRANSLATION	protein_coding	-	CCDS28902.1	1	325	0	0	1.5	137.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000093884	Olfr239	ENSMUST00000112165	ENSMUSP00000129451	TRANSLATION	protein_coding	-	CCDS50065.1	-	315	0	0.32	6.6	178.4	8	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000093884	Olfr239	ENSMUST00000213731	ENSMUSP00000154277	TRANSLATION	protein_coding	-	-	5	319	0	0.32	0	178.4	8	-4,-5	-	-	12	MINOR
ENSMUSG00000093884	Olfr239	ENSMUST00000214406	ENSMUSP00000150882	TRANSLATION	protein_coding	-	CCDS50065.1	5	315	0	0.32	6.6	178.4	8	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096697	Esp23	ENSMUST00000178532	ENSMUSP00000136827	TRANSLATION	protein_coding	-	CCDS57087.1	1	104	0	0	0.5	33.8	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000092043	Esp6	ENSMUST00000232937	ENSMUSP00000156808	TRANSLATION	protein_coding	-	-	-	156	0	0	0	135.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000092043	Esp6	ENSMUST00000097324	ENSMUSP00000094930	TRANSLATION	protein_coding	-	CCDS50109.1	1	136	0	0	0.5	135.4	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000039615	Stub1	ENSMUST00000044911	ENSMUSP00000040431	TRANSLATION	protein_coding	-	CCDS28533.1	1	304	0	6.25	6.3	151.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000039615	Stub1	ENSMUST00000236361	ENSMUSP00000158435	TRANSLATION	protein_coding	-	-	-	268	0	5.43	0	149.9	0	-4,-7	-	-	10.26	MINOR
ENSMUSG00000039615	Stub1	ENSMUST00000236565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039615	Stub1	ENSMUST00000237186	ENSMUSP00000158532	TRANSLATION	protein_coding	-	-	-	277	0	5.7	0	149.7	0	-4,-1	-	-	10.788	MINOR
ENSMUSG00000039615	Stub1	ENSMUST00000235572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039615	Stub1	ENSMUST00000235484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039615	Stub1	ENSMUST00000236515	ENSMUSP00000157919	TRANSLATION	protein_coding	-	-	-	268	0	5.43	0	149.9	0	-4,-7	-	-	10.26	MINOR
ENSMUSG00000073435	Nme3	ENSMUST00000154321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073435	Nme3	ENSMUST00000125532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073435	Nme3	ENSMUST00000145688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073435	Nme3	ENSMUST00000150500	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073435	Nme3	ENSMUST00000024978	ENSMUSP00000024978	TRANSLATION	protein_coding	-	CCDS28503.1	1	169	12	4.5	11.8	186.6	0	1,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000095625	Esp24	ENSMUST00000232955	ENSMUSP00000156516	TRANSLATION	protein_coding	-	CCDS57086.1	-	68	0	0	0.5	61.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000095625	Esp24	ENSMUST00000180245	ENSMUSP00000137640	TRANSLATION	protein_coding	-	CCDS57086.1	5	68	0	0	0.5	61.1	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000040097	Flywch1	ENSMUST00000086325	ENSMUSP00000083505	TRANSLATION	protein_coding	-	CCDS28463.1	1	673	19	1	0.5	370.9	0	-4,-5	-	-	17.334	PRINCIPAL:1
ENSMUSG00000040097	Flywch1	ENSMUST00000226460	ENSMUSP00000154742	TRANSLATION	protein_coding	stop	-	-	96	0	0	0	32	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040097	Flywch1	ENSMUST00000227120	ENSMUSP00000154618	TRANSLATION	protein_coding	start	-	-	631	20	1	0	339.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040097	Flywch1	ENSMUST00000227733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040097	Flywch1	ENSMUST00000045517	ENSMUSP00000040022	TRANSLATION	protein_coding	-	CCDS28463.1	1	673	19	1	0.5	370.9	0	-4,-5	-	-	17.334	PRINCIPAL:1
ENSMUSG00000042419	Nfkbil1	ENSMUST00000048994	ENSMUSP00000035452	TRANSLATION	protein_coding	-	CCDS28693.1	1	381	0	0.76	7.5	23.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000042419	Nfkbil1	ENSMUST00000176748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090877	Hspa1b	ENSMUST00000172753	ENSMUSP00000133815	TRANSLATION	protein_coding	-	CCDS37592.1	-	642	19	1	0.5	865.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023972	Ptk7	ENSMUST00000232855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023972	Ptk7	ENSMUST00000044442	ENSMUSP00000043703	TRANSLATION	protein_coding	-	CCDS37637.1	1	1062	2	4.8	0.5	575.9	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000005371	Fbxo11	ENSMUST00000130379	ENSMUSP00000121206	TRANSLATION	protein_coding	-	-	1	842	7	1.31	11.7	280.7	0	-4,-5	-	-	20.838	PRINCIPAL:1
ENSMUSG00000005371	Fbxo11	ENSMUST00000127334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005371	Fbxo11	ENSMUST00000135639	ENSMUSP00000138653	TRANSLATION	nonsense_mediated_decay	start	-	5	137	0	0	0	53.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005371	Fbxo11	ENSMUST00000005504	ENSMUSP00000005504	TRANSLATION	protein_coding	-	CCDS37717.1	5	930	7	1.11	0.5	283.4	0	-4,-2	-	-	17.082	MINOR
ENSMUSG00000005371	Fbxo11	ENSMUST00000235112	ENSMUSP00000157024	TRANSLATION	protein_coding	-	-	-	842	7	1.31	11.7	280.7	0	-4,-5	-	-	20.838	PRINCIPAL:1
ENSMUSG00000005371	Fbxo11	ENSMUST00000235056	ENSMUSP00000157142	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024365	Cyp21a1	ENSMUST00000173970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024365	Cyp21a1	ENSMUST00000173394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024365	Cyp21a1	ENSMUST00000025223	ENSMUSP00000025223	TRANSLATION	protein_coding	-	CCDS28658.1	1	487	33	9.45	0.5	321.2	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000003208	Yju2	ENSMUST00000086869	ENSMUSP00000084082	TRANSLATION	protein_coding	-	CCDS37660.1	1	314	4	2.43	1.5	371.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003208	Yju2	ENSMUST00000233661	ENSMUSP00000156755	TRANSLATION	protein_coding	-	-	-	256	4	2.43	1	351.8	0	-4,-5	-	-	14.8	MINOR
ENSMUSG00000003208	Yju2	ENSMUST00000233226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003208	Yju2	ENSMUST00000233204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090315	Vmn2r104	ENSMUST00000233647	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090315	Vmn2r104	ENSMUST00000168050	ENSMUSP00000129895	TRANSLATION	protein_coding	-	CCDS49981.1	5	860	4	3.24	0.5	389.7	0	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000090315	Vmn2r104	ENSMUST00000233932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116895	Gm3435	ENSMUST00000097395	ENSMUSP00000095007	TRANSLATION	protein_coding	-	CCDS49962.1	5	438	0	0	0.5	83.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000116895	Gm3435	ENSMUST00000232446	ENSMUSP00000156195	TRANSLATION	protein_coding	-	-	-	202	0	0	0	0	0	-3,-5	-	-	0	MINOR
ENSMUSG00000117284	Gm7072	ENSMUST00000233465	ENSMUSP00000156489	TRANSLATION	protein_coding	-	-	-	689	72	1.4	0	446	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000162119	ENSMUSP00000124952	TRANSLATION	protein_coding	stop	-	3	110	0	0.42	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000068037	Mas1	ENSMUST00000233607	ENSMUSP00000156871	TRANSLATION	protein_coding	-	CCDS28394.1	-	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000167152	ENSMUSP00000131341	TRANSLATION	protein_coding	-	CCDS28394.1	5	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000159223	ENSMUSP00000124295	TRANSLATION	protein_coding	stop	-	3	72	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000068037	Mas1	ENSMUST00000162389	ENSMUSP00000124879	TRANSLATION	protein_coding	stop	-	3	76	0	0.42	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000068037	Mas1	ENSMUST00000162333	ENSMUSP00000125108	TRANSLATION	protein_coding	-	CCDS28394.1	1	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000159865	ENSMUSP00000124901	TRANSLATION	protein_coding	stop	-	1	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068037	Mas1	ENSMUST00000165020	ENSMUSP00000132300	TRANSLATION	protein_coding	-	CCDS28394.1	5	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000161747	ENSMUSP00000123902	TRANSLATION	protein_coding	-	CCDS28394.1	1	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000068037	Mas1	ENSMUST00000089015	ENSMUSP00000086409	TRANSLATION	protein_coding	-	CCDS28394.1	1	324	0	1.38	3.9	54.9	8	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000002496	Tsc2	ENSMUST00000227509	ENSMUSP00000154493	TRANSLATION	protein_coding	stop	-	-	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002496	Tsc2	ENSMUST00000227754	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002496	Tsc2	ENSMUST00000226242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000227330	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002496	Tsc2	ENSMUST00000226428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000226691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000227432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000227607	ENSMUSP00000153758	TRANSLATION	protein_coding	stop	-	-	1359	0	0	0	805.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002496	Tsc2	ENSMUST00000226284	ENSMUSP00000153869	TRANSLATION	protein_coding	-	-	-	1785	0	2.225	1.5	950.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000002496	Tsc2	ENSMUST00000227745	ENSMUSP00000154338	TRANSLATION	protein_coding	-	-	-	1808	0	2.225	1.5	950.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000002496	Tsc2	ENSMUST00000227094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000228412	ENSMUSP00000154706	TRANSLATION	protein_coding	-	-	-	1741	0	2.225	1.5	950.3	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000002496	Tsc2	ENSMUST00000226473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002496	Tsc2	ENSMUST00000227804	ENSMUSP00000153864	TRANSLATION	protein_coding	start	-	-	237	0	1.28	0	109.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002496	Tsc2	ENSMUST00000227543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000226398	ENSMUSP00000153792	TRANSLATION	protein_coding	-	CCDS28486.1	-	1742	0	2.225	1.5	950.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000002496	Tsc2	ENSMUST00000226985	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000097373	ENSMUSP00000094986	TRANSLATION	protein_coding	-	CCDS28486.1	1	1742	0	2.225	1.5	950.3	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000002496	Tsc2	ENSMUST00000228220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000227658	ENSMUSP00000153770	TRANSLATION	nonsense_mediated_decay	start	-	-	97	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000002496	Tsc2	ENSMUST00000228729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002496	Tsc2	ENSMUST00000226309	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025730	Rab40c	ENSMUST00000166146	ENSMUSP00000132355	TRANSLATION	nonsense_mediated_decay	-	-	1	56	7	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025730	Rab40c	ENSMUST00000167018	ENSMUSP00000131055	TRANSLATION	protein_coding	stop	-	1	278	15	4.35	12.8	166.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025730	Rab40c	ENSMUST00000026826	ENSMUSP00000026826	TRANSLATION	protein_coding	-	CCDS28537.1	1	281	15	4.35	12.8	166.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025730	Rab40c	ENSMUST00000166619	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025730	Rab40c	ENSMUST00000172168	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025730	Rab40c	ENSMUST00000164738	ENSMUSP00000130093	TRANSLATION	protein_coding	stop	-	5	111	8	3.05	0	84.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025730	Rab40c	ENSMUST00000164982	ENSMUSP00000127868	TRANSLATION	protein_coding	-	-	5	262	11	3.85	1.2	116	0	-4,-7	-	-	11.39	MINOR
ENSMUSG00000025730	Rab40c	ENSMUST00000179998	ENSMUSP00000136612	TRANSLATION	protein_coding	-	CCDS28537.1	5	281	15	4.35	12.8	166.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025730	Rab40c	ENSMUST00000167626	ENSMUSP00000127546	TRANSLATION	protein_coding	-	CCDS28537.1	1	281	15	4.35	12.8	166.2	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000015579	Nkx2-5	ENSMUST00000235454	ENSMUSP00000157537	TRANSLATION	protein_coding	stop	-	-	317	0	0.8	2.7	71.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015579	Nkx2-5	ENSMUST00000015723	ENSMUSP00000015723	TRANSLATION	protein_coding	-	CCDS28556.1	1	318	0	0.8	2.7	71.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094690	1600014C23Rik	ENSMUST00000233108	-	NO_TRANSLATION	lincRNA
ENSMUSG00000094690	1600014C23Rik	ENSMUST00000178179	ENSMUSP00000136788	TRANSLATION	protein_coding	-	CCDS57097.1	1	101	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000073460	Pnldc1	ENSMUST00000233711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073460	Pnldc1	ENSMUST00000233098	ENSMUSP00000156408	TRANSLATION	nonsense_mediated_decay	start	-	-	34	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000073460	Pnldc1	ENSMUST00000233189	ENSMUSP00000156846	TRANSLATION	nonsense_mediated_decay	start	-	-	25	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073460	Pnldc1	ENSMUST00000233474	ENSMUSP00000156494	TRANSLATION	nonsense_mediated_decay	-	-	-	315	0	5.737	0.5	237.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073460	Pnldc1	ENSMUST00000232982	ENSMUSP00000156864	TRANSLATION	protein_coding	start/stop	-	-	206	0	3.61	0	140.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073460	Pnldc1	ENSMUST00000233548	ENSMUSP00000156659	TRANSLATION	nonsense_mediated_decay	-	-	-	261	0	4.387	0	149.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073460	Pnldc1	ENSMUST00000163394	ENSMUSP00000129377	TRANSLATION	protein_coding	-	CCDS49948.1	1	531	0	7.797	1.5	264.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000023931	Efhb	ENSMUST00000233544	ENSMUSP00000156438	TRANSLATION	nonsense_mediated_decay	-	-	-	290	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000023931	Efhb	ENSMUST00000024725	ENSMUSP00000024725	TRANSLATION	protein_coding	-	CCDS37652.1	1	853	8	1.28	1.5	34.9	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024188	Luc7l	ENSMUST00000119928	ENSMUSP00000113405	TRANSLATION	protein_coding	-	CCDS28550.1	5	325	5	0	4.1	277.1	0	-4,-6	-	-	12.512	ALTERNATIVE:2
ENSMUSG00000024188	Luc7l	ENSMUST00000148894	ENSMUSP00000115213	TRANSLATION	nonsense_mediated_decay	-	-	1	79	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024188	Luc7l	ENSMUST00000114976	ENSMUSP00000110627	TRANSLATION	protein_coding	-	CCDS28549.1	1	371	5	0	5.1	277.1	0	-4,-6	-	-	13	PRINCIPAL:4
ENSMUSG00000024188	Luc7l	ENSMUST00000025023	ENSMUSP00000025023	TRANSLATION	protein_coding	-	CCDS28550.1	1	325	5	0	4.1	277.1	0	-4,-6	-	-	12.512	ALTERNATIVE:2
ENSMUSG00000024188	Luc7l	ENSMUST00000154235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024188	Luc7l	ENSMUST00000133032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024188	Luc7l	ENSMUST00000140427	ENSMUSP00000122258	TRANSLATION	protein_coding	stop	-	5	172	5	0	0	161.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024188	Luc7l	ENSMUST00000152107	ENSMUSP00000119717	TRANSLATION	protein_coding	start	-	5	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024188	Luc7l	ENSMUST00000155151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096255	Dynlt1b	ENSMUST00000179569	ENSMUSP00000137171	TRANSLATION	protein_coding	-	CCDS49936.1	1	113	0	3.33	21.5	110.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000033825	Tpsb2	ENSMUST00000069616	ENSMUSP00000063499	TRANSLATION	protein_coding	-	CCDS28517.1	1	276	13	4.15	0.5	229.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033825	Tpsb2	ENSMUST00000234477	ENSMUSP00000157286	TRANSLATION	protein_coding	-	CCDS28517.1	-	276	13	4.15	0.5	229.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000033825	Tpsb2	ENSMUST00000234057	ENSMUSP00000157332	TRANSLATION	protein_coding	-	-	-	172	9	2.15	0	118.4	0	4,-1	-	-	5.334	MINOR
ENSMUSG00000033825	Tpsb2	ENSMUST00000234712	ENSMUSP00000157001	TRANSLATION	protein_coding	-	-	-	230	9	3.414	0	149.7	0	4,-1	-	-	9.066	MINOR
ENSMUSG00000045551	Fpr1	ENSMUST00000061516	ENSMUSP00000052894	TRANSLATION	protein_coding	-	CCDS28418.1	1	364	0	0.48	0.5	132.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054951	9130008F23Rik	ENSMUST00000068258	ENSMUSP00000069779	TRANSLATION	protein_coding	-	CCDS50110.1	1	181	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000054951	9130008F23Rik	ENSMUST00000233122	ENSMUSP00000156475	TRANSLATION	protein_coding	-	CCDS50110.1	-	181	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000054951	9130008F23Rik	ENSMUST00000233871	ENSMUSP00000156735	TRANSLATION	nonsense_mediated_decay	-	-	-	181	0	0	0.5	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002379	Ndufa11	ENSMUST00000002452	ENSMUSP00000002452	TRANSLATION	protein_coding	-	CCDS50155.1	1	143	0	4.33	1.5	35.6	0	-4,-6	-	-	11.886	PRINCIPAL:1
ENSMUSG00000002379	Ndufa11	ENSMUST00000233457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002379	Ndufa11	ENSMUST00000233832	ENSMUSP00000156832	TRANSLATION	protein_coding	-	-	-	76	0	2	0	0	0	-4,-5	-	-	1.338	MINOR
ENSMUSG00000002379	Ndufa11	ENSMUST00000233233	ENSMUSP00000156737	TRANSLATION	protein_coding	-	-	-	116	0	3.33	0	36.3	0	-4,-6	-	-	10.002	MINOR
ENSMUSG00000023982	Guca1a	ENSMUST00000059348	ENSMUSP00000060027	TRANSLATION	protein_coding	-	CCDS28848.1	1	202	16	4	2.8	83.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043782	Bicdl2	ENSMUST00000233541	ENSMUSP00000156538	TRANSLATION	protein_coding	-	-	-	441	0	1.2	0	0	0	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000043782	Bicdl2	ENSMUST00000232760	ENSMUSP00000156752	TRANSLATION	protein_coding	-	CCDS28453.1	-	507	0	1.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000043782	Bicdl2	ENSMUST00000233930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043782	Bicdl2	ENSMUST00000062967	ENSMUSP00000053808	TRANSLATION	protein_coding	-	CCDS28453.1	1	507	0	1.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000024065	Ehd3	ENSMUST00000233212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024065	Ehd3	ENSMUST00000024860	ENSMUSP00000024860	TRANSLATION	protein_coding	-	CCDS28966.1	1	535	24	6	17.5	109.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000091831	Gm4707	ENSMUST00000171504	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000091831	Gm4707	ENSMUST00000183937	ENSMUSP00000139241	TRANSLATION	protein_coding	-	-	-	68	0	0	0	0	0	-1,-4	-	-	0	PRINCIPAL:1
ENSMUSG00000024027	Glp1r	ENSMUST00000236038	ENSMUSP00000157572	TRANSLATION	nonsense_mediated_decay	-	-	-	463	0	9.85	5.2	331.7	5	3,-3	-	-	-1	MINOR
ENSMUSG00000024027	Glp1r	ENSMUST00000114574	ENSMUSP00000110221	TRANSLATION	protein_coding	-	CCDS37542.1	1	463	0	9.85	5.2	331.7	5	3,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000015575	Atp6v0e	ENSMUST00000015719	ENSMUSP00000015719	TRANSLATION	protein_coding	-	CCDS28554.1	1	81	0	0	15.7	76	4	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000015575	Atp6v0e	ENSMUST00000236299	ENSMUSP00000158131	TRANSLATION	protein_coding	-	-	-	104	0	0	0	41.6	2	-1,-5	-	-	3.282	MINOR
ENSMUSG00000015575	Atp6v0e	ENSMUST00000167352	ENSMUSP00000127552	TRANSLATION	protein_coding	-	CCDS28554.1	1	81	0	0	15.7	76	4	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000015575	Atp6v0e	ENSMUST00000236867	ENSMUSP00000158156	TRANSLATION	protein_coding	-	-	-	86	0	0	0	50.5	2	-4,-7	-	-	3.984	MINOR
ENSMUSG00000015575	Atp6v0e	ENSMUST00000236346	ENSMUSP00000158492	TRANSLATION	protein_coding	-	-	-	80	0	0	0	51.4	2	-4,-1	-	-	4.056	MINOR
ENSMUSG00000067235	H2-Q10	ENSMUST00000174589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067235	H2-Q10	ENSMUST00000068291	ENSMUSP00000066419	TRANSLATION	protein_coding	-	CCDS37599.1	1	325	0	4.5	0.5	376.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000067235	H2-Q10	ENSMUST00000174525	ENSMUSP00000134163	TRANSLATION	protein_coding	-	CCDS37599.1	5	325	0	4.5	0.5	376.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035521	Gnptg	ENSMUST00000038973	ENSMUSP00000042073	TRANSLATION	protein_coding	-	CCDS28511.1	1	307	0	0	1.5	30.2	0	1,-2	-	-	5.862	PRINCIPAL:2
ENSMUSG00000035521	Gnptg	ENSMUST00000115154	ENSMUSP00000110807	TRANSLATION	protein_coding	-	-	1	314	0	0	0	30.9	0	1,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000041293	Adgrf1	ENSMUST00000047399	ENSMUSP00000049380	TRANSLATION	protein_coding	-	CCDS28795.1	1	908	0	1.02	0.5	196.1	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000050102	Vmn1r235	ENSMUST00000060603	ENSMUSP00000061689	TRANSLATION	protein_coding	-	CCDS37461.1	1	328	0	0	0.5	64.4	11	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000236212	ENSMUSP00000158083	TRANSLATION	protein_coding	-	CCDS37461.1	-	328	0	0	0.5	64.4	11	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000236821	ENSMUSP00000158023	TRANSLATION	protein_coding	-	CCDS37461.1	-	328	0	0	0.5	64.4	11	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000237540	ENSMUSP00000157642	TRANSLATION	protein_coding	-	-	-	307	0	0	0	64.4	11	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000235270	ENSMUSP00000157741	TRANSLATION	protein_coding	-	-	-	349	0	0	0	64.4	11	-4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000236183	ENSMUSP00000157784	TRANSLATION	protein_coding	-	-	-	307	0	0	0	64.4	11	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000050102	Vmn1r235	ENSMUST00000237810	ENSMUSP00000157418	TRANSLATION	protein_coding	-	-	-	307	0	0	0	64.4	11	1,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000043445	Pgp	ENSMUST00000234216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043445	Pgp	ENSMUST00000053024	ENSMUSP00000052866	TRANSLATION	protein_coding	-	CCDS28482.1	1	321	7	2	5.2	154.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000063188	Olfr107	ENSMUST00000216844	ENSMUSP00000148879	TRANSLATION	protein_coding	-	CCDS28750.1	5	309	0	0.36	1.5	184	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063188	Olfr107	ENSMUST00000215894	ENSMUSP00000149990	TRANSLATION	protein_coding	-	CCDS28750.1	5	309	0	0.36	1.5	184	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063188	Olfr107	ENSMUST00000215974	ENSMUSP00000149165	TRANSLATION	protein_coding	-	CCDS28750.1	5	309	0	0.36	1.5	184	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063188	Olfr107	ENSMUST00000215947	ENSMUSP00000149951	TRANSLATION	protein_coding	-	CCDS28750.1	5	309	0	0.36	1.5	184	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000063188	Olfr107	ENSMUST00000077008	ENSMUSP00000076267	TRANSLATION	protein_coding	-	CCDS28750.1	-	309	0	0.36	1.5	184	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031233	Pgk2	ENSMUST00000033585	ENSMUSP00000033585	TRANSLATION	protein_coding	-	CCDS28782.1	-	417	28	1	11.3	502	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024154	Gtf2a1l	ENSMUST00000024970	ENSMUSP00000024970	TRANSLATION	protein_coding	-	CCDS29024.1	1	468	0	3.73	1.5	385	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024154	Gtf2a1l	ENSMUST00000234392	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024154	Gtf2a1l	ENSMUST00000161481	ENSMUSP00000124286	TRANSLATION	protein_coding	stop	-	3	242	0	1.73	0	97.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000043972	Opn5	ENSMUST00000068355	ENSMUSP00000063542	TRANSLATION	protein_coding	-	CCDS37619.1	1	377	15	3.46	0.5	137.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000023960	Enpp5	ENSMUST00000126032	ENSMUSP00000115049	TRANSLATION	nonsense_mediated_decay	-	-	1	45	0	0.4	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000023960	Enpp5	ENSMUST00000154166	ENSMUSP00000122767	TRANSLATION	protein_coding	-	CCDS28802.1	1	477	12	4.5	5.1	302.3	1	2,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000023960	Enpp5	ENSMUST00000024756	ENSMUSP00000024756	TRANSLATION	protein_coding	-	CCDS28802.1	1	477	12	4.5	5.1	302.3	1	2,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000002307	Daxx	ENSMUST00000174146	ENSMUSP00000134158	TRANSLATION	protein_coding	start/stop	-	1	186	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002307	Daxx	ENSMUST00000174646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002307	Daxx	ENSMUST00000173279	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002307	Daxx	ENSMUST00000172859	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002307	Daxx	ENSMUST00000170075	ENSMUSP00000128504	TRANSLATION	protein_coding	-	CCDS28633.1	1	740	0	5.4	0.5	166.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002307	Daxx	ENSMUST00000234670	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002307	Daxx	ENSMUST00000079421	ENSMUSP00000078390	TRANSLATION	protein_coding	-	CCDS28633.1	1	740	0	5.4	0.5	166.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002307	Daxx	ENSMUST00000173028	ENSMUSP00000133319	TRANSLATION	protein_coding	stop	-	3	137	0	1.4	0	140	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002307	Daxx	ENSMUST00000174541	ENSMUSP00000133552	TRANSLATION	protein_coding	stop	-	5	206	0	3.4	0	166.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002307	Daxx	ENSMUST00000173626	ENSMUSP00000133303	TRANSLATION	protein_coding	stop	-	3	166	0	2.15	0	166.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024098	Twsg1	ENSMUST00000024906	ENSMUSP00000024906	TRANSLATION	protein_coding	-	CCDS28942.1	1	222	0	0	7.5	156.2	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000024098	Twsg1	ENSMUST00000233663	ENSMUSP00000156938	TRANSLATION	protein_coding	start	-	-	41	0	0	0	73.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024098	Twsg1	ENSMUST00000233580	ENSMUSP00000156695	TRANSLATION	protein_coding	-	CCDS28942.1	-	222	0	0	7.5	156.2	0	3,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000024098	Twsg1	ENSMUST00000233855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023943	Sult1c1	ENSMUST00000024738	ENSMUSP00000024738	TRANSLATION	protein_coding	-	CCDS28884.1	1	304	20	7	2.7	304	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034673	Pbx2	ENSMUST00000174532	ENSMUSP00000133744	TRANSLATION	protein_coding	stop	-	2	147	0	0	0	227.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034673	Pbx2	ENSMUST00000038149	ENSMUSP00000040464	TRANSLATION	protein_coding	-	CCDS28648.1	1	430	0	2.1	3.9	384.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000034673	Pbx2	ENSMUST00000173328	ENSMUSP00000133766	TRANSLATION	protein_coding	-	-	2	348	0	2.1	1.2	329.4	0	-4,-5	-	-	8.781	MINOR
ENSMUSG00000034673	Pbx2	ENSMUST00000173229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034673	Pbx2	ENSMUST00000183827	ENSMUSP00000139079	TRANSLATION	protein_coding	-	-	5	370	0	2.1	2.4	367.3	0	-4,-5	-	-	11.469	MINOR
ENSMUSG00000040680	Kremen2	ENSMUST00000046525	ENSMUSP00000046369	TRANSLATION	protein_coding	-	CCDS28462.1	1	461	0	5.78	0.5	176.3	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000006818	Sod2	ENSMUST00000233791	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006818	Sod2	ENSMUST00000233897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006818	Sod2	ENSMUST00000233451	ENSMUSP00000156792	TRANSLATION	protein_coding	stop	-	-	50	0	1	0	35.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000006818	Sod2	ENSMUST00000233922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006818	Sod2	ENSMUST00000007012	ENSMUSP00000007012	TRANSLATION	protein_coding	-	CCDS28399.1	1	222	6	4.75	2.7	243.6	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000006818	Sod2	ENSMUST00000233333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006818	Sod2	ENSMUST00000232726	ENSMUSP00000156844	TRANSLATION	nonsense_mediated_decay	-	-	-	182	3	3.948	0	166.2	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000006818	Sod2	ENSMUST00000233278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000708	Kat2b	ENSMUST00000171072	ENSMUSP00000127807	TRANSLATION	nonsense_mediated_decay	start	-	5	118	9	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000708	Kat2b	ENSMUST00000167092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000708	Kat2b	ENSMUST00000164390	ENSMUSP00000127659	TRANSLATION	protein_coding	stop	-	5	211	0	0	0	296.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000708	Kat2b	ENSMUST00000163648	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000708	Kat2b	ENSMUST00000000724	ENSMUSP00000000724	TRANSLATION	protein_coding	-	CCDS28880.1	1	813	25	7.25	0.5	490.8	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000000708	Kat2b	ENSMUST00000172160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000708	Kat2b	ENSMUST00000166525	ENSMUSP00000126232	TRANSLATION	protein_coding	start	-	3	66	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062252	Lhfpl5	ENSMUST00000232974	ENSMUSP00000156557	TRANSLATION	protein_coding	-	CCDS37530.1	-	219	0	0	12.8	216.2	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000062252	Lhfpl5	ENSMUST00000232862	ENSMUSP00000156959	TRANSLATION	protein_coding	-	CCDS37530.1	-	219	0	0	12.8	216.2	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000062252	Lhfpl5	ENSMUST00000080780	ENSMUSP00000079598	TRANSLATION	protein_coding	-	CCDS37530.1	1	219	0	0	12.8	216.2	4	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000043827	Olfr94	ENSMUST00000222190	ENSMUSP00000153315	TRANSLATION	protein_coding	-	-	5	311	0	0.32	0	133.5	4	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000043827	Olfr94	ENSMUST00000055324	ENSMUSP00000055232	TRANSLATION	protein_coding	-	CCDS28738.1	-	386	0	0.32	0.5	133.5	4	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000043827	Olfr94	ENSMUST00000208047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033200	Tpsg1	ENSMUST00000160485	ENSMUSP00000124721	TRANSLATION	protein_coding	stop	-	3	172	16	2.56	0	146.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033200	Tpsg1	ENSMUST00000160377	ENSMUSP00000124008	TRANSLATION	protein_coding	-	-	1	208	16	2.56	0.5	146.7	1	-4,-7	-	-	8.712	MINOR
ENSMUSG00000033200	Tpsg1	ENSMUST00000160920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033200	Tpsg1	ENSMUST00000162021	ENSMUSP00000125180	TRANSLATION	protein_coding	-	-	5	165	12	1.8	0.5	89	1	0,-4	-	-	3.036	MINOR
ENSMUSG00000033200	Tpsg1	ENSMUST00000024999	ENSMUSP00000024999	TRANSLATION	protein_coding	-	CCDS28518.1	1	311	18	4.28	1.5	222	1	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000016283	H2-M2	ENSMUST00000171139	ENSMUSP00000131297	TRANSLATION	protein_coding	-	CCDS84312.1	1	343	0	3.63	0.5	303.8	0	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000016283	H2-M2	ENSMUST00000016427	ENSMUSP00000016427	TRANSLATION	protein_coding	-	-	1	304	0	3.15	0.5	303.8	0	3,-2	-	-	11.04	ALTERNATIVE:2
ENSMUSG00000025738	Fbxl16	ENSMUST00000045692	ENSMUSP00000048562	TRANSLATION	protein_coding	-	CCDS50036.1	5	479	0	1.83	3.9	39.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000025738	Fbxl16	ENSMUST00000235694	ENSMUSP00000157669	TRANSLATION	protein_coding	start	-	-	122	0	0.9	0	15	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025738	Fbxl16	ENSMUST00000236165	ENSMUSP00000157536	TRANSLATION	protein_coding	-	CCDS50036.1	-	479	0	1.83	3.9	39.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000024082	Ndufaf7	ENSMUST00000232821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024082	Ndufaf7	ENSMUST00000024887	ENSMUSP00000024887	TRANSLATION	protein_coding	-	CCDS28982.1	1	436	11	5.925	1.5	241.1	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233777	ENSMUSP00000156899	TRANSLATION	protein_coding	stop	-	-	288	11	4.34	0	170.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233935	ENSMUSP00000156809	TRANSLATION	protein_coding	start	-	-	117	0	1.95	0	64	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233068	ENSMUSP00000156412	TRANSLATION	protein_coding	-	-	-	383	11	5.765	0	241.1	0	-4,0	-	-	17.682	ALTERNATIVE:2
ENSMUSG00000024082	Ndufaf7	ENSMUST00000233138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024168	Tmem204	ENSMUST00000024984	ENSMUSP00000024984	TRANSLATION	protein_coding	-	CCDS28506.1	1	226	0	0	7.5	0	3	3,-2	-	-	3	PRINCIPAL:1
ENSMUSG00000024168	Tmem204	ENSMUST00000233505	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024168	Tmem204	ENSMUST00000153745	ENSMUSP00000119536	TRANSLATION	protein_coding	-	-	2	129	0	0	0	0	3	-1,-5	-	-	0	MINOR
ENSMUSG00000024168	Tmem204	ENSMUST00000232699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035580	Kcnh8	ENSMUST00000039366	ENSMUSP00000049206	TRANSLATION	protein_coding	-	CCDS57101.1	1	1102	0	9.21	1.5	216.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035580	Kcnh8	ENSMUST00000184279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050088	1600012H06Rik	ENSMUST00000052691	ENSMUSP00000093344	TRANSLATION	protein_coding	-	CCDS37444.1	1	185	0	0	2.8	357.4	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000050088	1600012H06Rik	ENSMUST00000174004	ENSMUSP00000133628	TRANSLATION	protein_coding	-	CCDS37444.1	1	185	0	0	2.8	357.4	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000050088	1600012H06Rik	ENSMUST00000174163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050088	1600012H06Rik	ENSMUST00000164837	ENSMUSP00000125970	TRANSLATION	protein_coding	-	CCDS37444.1	1	185	0	0	2.8	357.4	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000048249	Crebrf	ENSMUST00000142539	ENSMUSP00000114274	TRANSLATION	protein_coding	-	-	1	653	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048249	Crebrf	ENSMUST00000176845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048249	Crebrf	ENSMUST00000062519	ENSMUSP00000059102	TRANSLATION	protein_coding	-	CCDS37516.1	1	640	0	0	8.8	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000048249	Crebrf	ENSMUST00000132972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048249	Crebrf	ENSMUST00000144221	ENSMUSP00000120212	TRANSLATION	protein_coding	stop	-	1	351	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048249	Crebrf	ENSMUST00000151681	ENSMUSP00000119186	TRANSLATION	protein_coding	stop	-	2	137	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000072082	Ccnf	ENSMUST00000234541	ENSMUSP00000157253	TRANSLATION	nonsense_mediated_decay	start	-	-	124	0	0.48	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072082	Ccnf	ENSMUST00000234708	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072082	Ccnf	ENSMUST00000234837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072082	Ccnf	ENSMUST00000234096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072082	Ccnf	ENSMUST00000115390	ENSMUSP00000111048	TRANSLATION	protein_coding	-	CCDS37484.1	1	777	0	3.52	1.5	181.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000072082	Ccnf	ENSMUST00000234381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072082	Ccnf	ENSMUST00000234916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072082	Ccnf	ENSMUST00000235059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072082	Ccnf	ENSMUST00000234491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072082	Ccnf	ENSMUST00000234949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067370	B3galt4	ENSMUST00000087543	ENSMUSP00000084823	TRANSLATION	protein_coding	-	CCDS28638.1	-	371	0	0	1.5	216.7	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000090572	Vmn2r109	ENSMUST00000167093	ENSMUSP00000132641	TRANSLATION	protein_coding	-	CCDS49987.1	5	858	0	3.4	1.5	386.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000002257	Def6	ENSMUST00000233205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002257	Def6	ENSMUST00000146724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002257	Def6	ENSMUST00000233958	ENSMUSP00000156736	TRANSLATION	protein_coding	stop	-	-	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002257	Def6	ENSMUST00000233560	ENSMUSP00000156873	TRANSLATION	protein_coding	stop	-	-	180	3	1	0	25.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000002257	Def6	ENSMUST00000233264	ENSMUSP00000156702	TRANSLATION	protein_coding	start/stop	-	-	385	10	2	0	67.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002257	Def6	ENSMUST00000233170	ENSMUSP00000156601	TRANSLATION	protein_coding	-	-	-	257	3	0	0	0	0	-4,-6	-	-	1.332	MINOR
ENSMUSG00000002257	Def6	ENSMUST00000002327	ENSMUSP00000002327	TRANSLATION	protein_coding	-	CCDS28574.1	1	630	10	2	5.1	67.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000002257	Def6	ENSMUST00000233534	ENSMUSP00000156804	TRANSLATION	protein_coding	start/stop	-	-	129	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000131971	ENSMUSP00000120454	TRANSLATION	protein_coding	stop	-	5	143	0	0	0	102.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000129360	ENSMUSP00000114930	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000140234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032717	Mdfi	ENSMUST00000035375	ENSMUSP00000037888	TRANSLATION	protein_coding	-	CCDS50134.1	1	246	0	0	5.1	170.2	0	-4,-7	-	-	7.796	PRINCIPAL:1
ENSMUSG00000032717	Mdfi	ENSMUST00000132125	ENSMUSP00000114581	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000152455	ENSMUSP00000117665	TRANSLATION	protein_coding	stop	-	2	153	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000125745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032717	Mdfi	ENSMUST00000113280	ENSMUSP00000108905	TRANSLATION	protein_coding	-	-	5	186	0	0	0	173.6	0	-4,-6	-	-	6	MINOR
ENSMUSG00000032717	Mdfi	ENSMUST00000066368	ENSMUSP00000069915	TRANSLATION	protein_coding	-	CCDS50134.1	1	246	0	0	5.1	170.2	0	-4,-7	-	-	7.796	PRINCIPAL:1
ENSMUSG00000024083	Pja2	ENSMUST00000024889	ENSMUSP00000024889	TRANSLATION	protein_coding	-	CCDS37674.1	1	645	8	2.6	1.5	39	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024083	Pja2	ENSMUST00000172733	ENSMUSP00000133730	TRANSLATION	protein_coding	-	CCDS37674.1	1	645	8	2.6	1.5	39	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024083	Pja2	ENSMUST00000024888	ENSMUSP00000024888	TRANSLATION	protein_coding	-	CCDS37675.1	5	707	8	2.6	1.5	39	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024083	Pja2	ENSMUST00000232842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024083	Pja2	ENSMUST00000172818	ENSMUSP00000134380	TRANSLATION	protein_coding	-	CCDS37675.1	1	707	8	2.6	1.5	39	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000096549	Prickle4	ENSMUST00000113300	ENSMUSP00000108925	TRANSLATION	protein_coding	-	CCDS70823.1	5	369	16	0.8	0.5	114.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096549	Prickle4	ENSMUST00000142014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096549	Prickle4	ENSMUST00000152214	ENSMUSP00000121465	TRANSLATION	protein_coding	start	-	2	137	10	0	0	76.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096549	Prickle4	ENSMUST00000151540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096549	Prickle4	ENSMUST00000113299	ENSMUSP00000108924	TRANSLATION	protein_coding	start	-	5	329	16	0.8	0	114.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000029184	Olfr109	ENSMUST00000217602	ENSMUSP00000150044	TRANSLATION	protein_coding	-	CCDS28752.1	5	314	0	0.42	4.2	182.6	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000029184	Olfr109	ENSMUST00000031086	ENSMUSP00000031086	TRANSLATION	protein_coding	-	CCDS28752.1	-	314	0	0.42	4.2	182.6	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000029184	Olfr109	ENSMUST00000214668	ENSMUSP00000150326	TRANSLATION	protein_coding	-	CCDS28752.1	5	314	0	0.42	4.2	182.6	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000029184	Olfr109	ENSMUST00000214938	ENSMUSP00000150286	TRANSLATION	protein_coding	-	CCDS28752.1	5	314	0	0.42	4.2	182.6	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000091407	Vmn2r117	ENSMUST00000171996	ENSMUSP00000126885	TRANSLATION	protein_coding	-	CCDS50010.1	1	857	4	2.8	1.5	371.9	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000091407	Vmn2r117	ENSMUST00000234323	ENSMUSP00000157295	TRANSLATION	nonsense_mediated_decay	-	-	-	81	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000091407	Vmn2r117	ENSMUST00000234002	ENSMUSP00000157019	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034254	Agpat1	ENSMUST00000114140	ENSMUSP00000109776	TRANSLATION	protein_coding	-	CCDS37590.1	1	285	2	0	6.3	114.8	3	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000034254	Agpat1	ENSMUST00000037489	ENSMUSP00000048573	TRANSLATION	protein_coding	-	CCDS37590.1	1	285	2	0	6.3	114.8	3	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000034254	Agpat1	ENSMUST00000174228	ENSMUSP00000133876	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000034254	Agpat1	ENSMUST00000173973	ENSMUSP00000133947	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	0	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000034254	Agpat1	ENSMUST00000173146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034254	Agpat1	ENSMUST00000174041	ENSMUSP00000133441	TRANSLATION	protein_coding	stop	-	5	198	2	0	0	101.2	3	2,-2	-	-	-1	MINOR
ENSMUSG00000034254	Agpat1	ENSMUST00000173242	ENSMUSP00000134242	TRANSLATION	protein_coding	stop	-	2	149	2	0	0	47.2	3	2,-2	-	-	-1	MINOR
ENSMUSG00000034254	Agpat1	ENSMUST00000174595	ENSMUSP00000134358	TRANSLATION	protein_coding	-	CCDS37590.1	5	285	2	0	6.3	114.8	3	2,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000062743	Zfp677	ENSMUST00000056107	ENSMUSP00000052667	TRANSLATION	protein_coding	-	CCDS28439.1	1	634	67	1.4	0.5	467	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062743	Zfp677	ENSMUST00000162659	ENSMUSP00000125295	TRANSLATION	protein_coding	-	CCDS28439.1	1	634	67	1.4	0.5	467	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000067629	Syngap1	ENSMUST00000229490	ENSMUSP00000155085	TRANSLATION	protein_coding	-	-	-	1305	0	8.6	1	719.8	0	-4,-2	-	-	10.584	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000228963	ENSMUSP00000154838	TRANSLATION	protein_coding	-	-	-	1246	0	8.6	1	719.8	0	-4,-7	-	-	10.584	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000200799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067629	Syngap1	ENSMUST00000194598	ENSMUSP00000141686	TRANSLATION	protein_coding	-	CCDS59625.1	5	1340	0	8.6	2.9	743.4	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000067629	Syngap1	ENSMUST00000193200	ENSMUSP00000141245	TRANSLATION	nonsense_mediated_decay	start	-	5	1281	0	8.6	0	719.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000201349	ENSMUSP00000144666	TRANSLATION	protein_coding	start	-	5	1282	0	8.1	1.7	656.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000202939	ENSMUSP00000144403	TRANSLATION	nonsense_mediated_decay	start	-	5	65	0	1.5	0	29.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000201702	ENSMUSP00000144248	TRANSLATION	protein_coding	-	-	5	1289	0	8.6	1.2	721.9	0	-4,-2	-	-	10.71	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000177932	ENSMUSP00000137587	TRANSLATION	protein_coding	-	-	5	1308	0	8.6	0	722.5	0	-4,-2	-	-	10.746	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000202049	ENSMUSP00000144509	TRANSLATION	nonsense_mediated_decay	start	-	5	117	0	1.6	0	127.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000202208	ENSMUSP00000144414	TRANSLATION	nonsense_mediated_decay	start	-	5	124	0	2.1	0	182.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000201186	ENSMUSP00000144410	TRANSLATION	nonsense_mediated_decay	start	-	5	214	0	1.6	0	220	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000067629	Syngap1	ENSMUST00000231853	ENSMUSP00000156340	TRANSLATION	protein_coding	-	-	-	1167	0	8.6	0	743.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000067629	Syngap1	ENSMUST00000081285	ENSMUSP00000080038	TRANSLATION	protein_coding	-	-	5	1281	0	8.6	0	743.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000053375	Atp6v1e2	ENSMUST00000235110	ENSMUSP00000157068	TRANSLATION	protein_coding	-	CCDS29009.1	-	226	0	0.8	5.1	220.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053375	Atp6v1e2	ENSMUST00000065758	ENSMUSP00000065285	TRANSLATION	protein_coding	-	CCDS29009.1	1	226	0	0.8	5.1	220.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000053375	Atp6v1e2	ENSMUST00000233995	ENSMUSP00000157221	TRANSLATION	protein_coding	-	CCDS29009.1	-	226	0	0.8	5.1	220.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024085	Man2a1	ENSMUST00000086723	ENSMUSP00000083928	TRANSLATION	protein_coding	-	CCDS28938.1	1	1150	5	14.036	1.5	774	0	-2,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024085	Man2a1	ENSMUST00000169239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024085	Man2a1	ENSMUST00000169668	ENSMUSP00000130529	TRANSLATION	protein_coding	start	-	5	280	0	4.55	0	163.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096009	Olfr134	ENSMUST00000215900	ENSMUSP00000151069	TRANSLATION	protein_coding	-	CCDS28777.1	5	312	0	0.3	5.1	169.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000096009	Olfr134	ENSMUST00000074883	ENSMUSP00000074423	TRANSLATION	protein_coding	-	CCDS28777.1	-	312	0	0.3	5.1	169.5	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000024457	Trim26	ENSMUST00000130801	ENSMUSP00000118388	TRANSLATION	protein_coding	stop	-	3	253	16	2	0	82	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024457	Trim26	ENSMUST00000179968	ENSMUSP00000136651	TRANSLATION	protein_coding	-	-	5	545	16	3.707	1.5	179.4	0	-4,-5	-	-	16.968	ALTERNATIVE:2
ENSMUSG00000024457	Trim26	ENSMUST00000124136	ENSMUSP00000120764	TRANSLATION	protein_coding	start	-	5	195	0	2.21	0	51.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024457	Trim26	ENSMUST00000130367	ENSMUSP00000114896	TRANSLATION	protein_coding	-	CCDS37613.1	5	545	16	3.707	1.5	179.4	0	-4,-5	-	-	16.968	PRINCIPAL:2
ENSMUSG00000024457	Trim26	ENSMUST00000124307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024457	Trim26	ENSMUST00000123715	ENSMUSP00000118438	TRANSLATION	protein_coding	-	-	5	326	16	2.742	0	82	0	-4,-5	-	-	9.198	MINOR
ENSMUSG00000024457	Trim26	ENSMUST00000053434	ENSMUSP00000060103	TRANSLATION	protein_coding	-	CCDS37613.1	1	545	16	3.707	1.5	179.4	0	-4,-5	-	-	16.968	PRINCIPAL:2
ENSMUSG00000024457	Trim26	ENSMUST00000156872	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024457	Trim26	ENSMUST00000134325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024457	Trim26	ENSMUST00000144182	ENSMUSP00000114565	TRANSLATION	protein_coding	stop	-	1	394	16	4.222	0	133.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072968	Gm17728	ENSMUST00000076982	ENSMUSP00000125941	TRANSLATION	protein_coding	-	-	-	132	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000064121	Olfr96	ENSMUST00000213475	ENSMUSP00000150010	TRANSLATION	protein_coding	-	CCDS28740.1	5	313	0	0.36	1.5	178.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064121	Olfr96	ENSMUST00000078209	ENSMUSP00000077338	TRANSLATION	protein_coding	-	CCDS28740.1	-	313	0	0.36	1.5	178.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064121	Olfr96	ENSMUST00000214482	ENSMUSP00000151151	TRANSLATION	protein_coding	-	CCDS28740.1	5	313	0	0.36	1.5	178.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037334	H2-M1	ENSMUST00000041662	ENSMUSP00000040435	TRANSLATION	protein_coding	-	CCDS37612.1	1	344	0	3.8	0.5	211.9	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024422	Dhx16	ENSMUST00000174308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024422	Dhx16	ENSMUST00000172730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024422	Dhx16	ENSMUST00000174366	ENSMUSP00000133888	TRANSLATION	nonsense_mediated_decay	-	-	2	741	12	7.3	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024422	Dhx16	ENSMUST00000173596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024422	Dhx16	ENSMUST00000174449	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024422	Dhx16	ENSMUST00000025292	ENSMUSP00000025292	TRANSLATION	protein_coding	-	CCDS28710.1	1	1044	12	15.66	6.3	215.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024422	Dhx16	ENSMUST00000173967	ENSMUSP00000133818	TRANSLATION	protein_coding	start	-	3	123	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024422	Dhx16	ENSMUST00000174330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092292	Olfr113	ENSMUST00000216181	ENSMUSP00000149739	TRANSLATION	protein_coding	-	CCDS57081.1	5	312	0	0.32	1.5	156.2	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096477	Olfr92	ENSMUST00000216341	ENSMUSP00000150988	TRANSLATION	protein_coding	-	CCDS50108.1	5	312	0	0.42	6.3	169.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096477	Olfr92	ENSMUST00000168659	ENSMUSP00000128393	TRANSLATION	protein_coding	-	CCDS50108.1	-	312	0	0.42	6.3	169.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000096477	Olfr92	ENSMUST00000214994	ENSMUSP00000150998	TRANSLATION	protein_coding	-	CCDS50108.1	5	312	0	0.42	6.3	169.5	5	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000091043	Glyatl3	ENSMUST00000166343	ENSMUSP00000125916	TRANSLATION	protein_coding	-	CCDS50111.1	5	290	22	0	3.9	305.1	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000048915	Efna5	ENSMUST00000078839	ENSMUSP00000077883	TRANSLATION	protein_coding	-	CCDS28934.1	1	201	0	2.55	7.6	135.4	0	4,-1	-	-	14.664	ALTERNATIVE:1
ENSMUSG00000048915	Efna5	ENSMUST00000076840	ENSMUSP00000076115	TRANSLATION	protein_coding	-	CCDS28935.1	1	228	0	2.7	7.6	135.4	0	4,-1	-	-	15	PRINCIPAL:4
ENSMUSG00000024130	Abca3	ENSMUST00000149233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024130	Abca3	ENSMUST00000039013	ENSMUSP00000045285	TRANSLATION	protein_coding	-	CCDS37486.1	1	1704	19	7.35	2.9	387.3	14	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024130	Abca3	ENSMUST00000155889	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024130	Abca3	ENSMUST00000234109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024130	Abca3	ENSMUST00000148557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024130	Abca3	ENSMUST00000133816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024130	Abca3	ENSMUST00000136295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024130	Abca3	ENSMUST00000117337	ENSMUSP00000113538	TRANSLATION	protein_coding	-	-	1	1449	19	7.35	0	360.3	14	-3,-5	-	-	16.38	MINOR
ENSMUSG00000024130	Abca3	ENSMUST00000079594	ENSMUSP00000078544	TRANSLATION	protein_coding	-	CCDS37486.1	5	1704	19	7.35	2.9	387.3	14	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024241	Sos1	ENSMUST00000234841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024241	Sos1	ENSMUST00000068714	ENSMUSP00000067786	TRANSLATION	protein_coding	-	CCDS37704.1	2	1319	0	19.1	8.3	421.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023999	Kif6	ENSMUST00000160049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023999	Kif6	ENSMUST00000024798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023999	Kif6	ENSMUST00000162029	ENSMUSP00000125227	TRANSLATION	nonsense_mediated_decay	-	-	5	84	3	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023999	Kif6	ENSMUST00000159396	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023999	Kif6	ENSMUST00000159354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023999	Kif6	ENSMUST00000162854	ENSMUSP00000124674	TRANSLATION	protein_coding	-	CCDS50144.1	5	802	11	7.56	1.5	321.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023999	Kif6	ENSMUST00000162419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000238133	ENSMUSP00000157472	TRANSLATION	nonsense_mediated_decay	-	-	-	118	0	0	0	76.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058392	Rrp1b	ENSMUST00000137917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058392	Rrp1b	ENSMUST00000149746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000147076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000081339	ENSMUSP00000080085	TRANSLATION	protein_coding	-	CCDS28613.1	1	724	0	0	0.5	232.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000058392	Rrp1b	ENSMUST00000150187	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000236425	ENSMUSP00000157786	TRANSLATION	nonsense_mediated_decay	start	-	-	122	0	0	0	88.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058392	Rrp1b	ENSMUST00000237131	ENSMUSP00000158153	TRANSLATION	nonsense_mediated_decay	-	-	-	82	0	0	0	79.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058392	Rrp1b	ENSMUST00000136094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000150151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000151808	ENSMUSP00000123044	TRANSLATION	nonsense_mediated_decay	-	-	5	118	0	0	0	76.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058392	Rrp1b	ENSMUST00000156164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058392	Rrp1b	ENSMUST00000236329	ENSMUSP00000157510	TRANSLATION	nonsense_mediated_decay	-	-	-	118	0	0	0	76.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058392	Rrp1b	ENSMUST00000150469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058392	Rrp1b	ENSMUST00000126602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000177193	ENSMUSP00000135288	TRANSLATION	protein_coding	stop	-	3	170	9	1.25	0	33.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176237	ENSMUSP00000134946	TRANSLATION	protein_coding	stop	-	5	271	22	1.974	0	33.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000175732	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000176178	ENSMUSP00000134808	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176324	ENSMUSP00000135339	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000176668	ENSMUSP00000135586	TRANSLATION	nonsense_mediated_decay	-	-	1	81	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000177405	ENSMUSP00000135127	TRANSLATION	nonsense_mediated_decay	-	-	3	80	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177139	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052752	Traf7	ENSMUST00000176652	ENSMUSP00000134759	TRANSLATION	protein_coding	-	CCDS50014.1	5	669	22	7.789	12.8	127.3	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000052752	Traf7	ENSMUST00000176434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000176530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000070777	ENSMUSP00000069334	TRANSLATION	protein_coding	-	CCDS50015.1	5	629	22	7.789	2.5	127.3	0	-4,-2	-	-	18.508	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176086	ENSMUSP00000135845	TRANSLATION	nonsense_mediated_decay	-	-	1	132	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176353	ENSMUSP00000135267	TRANSLATION	protein_coding	-	CCDS50015.1	1	629	22	7.789	2.5	127.3	0	-4,-2	-	-	18.508	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177154	ENSMUSP00000135874	TRANSLATION	protein_coding	stop	-	5	228	14	1.554	0	33.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177401	ENSMUSP00000135341	TRANSLATION	nonsense_mediated_decay	-	-	2	45	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177502	ENSMUSP00000134970	TRANSLATION	nonsense_mediated_decay	start	-	3	76	7	0.75	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176633	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000176805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052752	Traf7	ENSMUST00000088464	ENSMUSP00000085812	TRANSLATION	protein_coding	-	CCDS50014.1	5	669	22	7.789	12.8	127.3	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000052752	Traf7	ENSMUST00000175698	ENSMUSP00000135456	TRANSLATION	nonsense_mediated_decay	start	-	3	84	4	0.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000177025	ENSMUSP00000135583	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052752	Traf7	ENSMUST00000176092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052752	Traf7	ENSMUST00000176361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015478	Rnf5	ENSMUST00000174475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015478	Rnf5	ENSMUST00000174045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015478	Rnf5	ENSMUST00000015622	ENSMUSP00000015622	TRANSLATION	protein_coding	-	CCDS28650.1	1	180	8	1.344	1.5	39.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024256	Adcyap1	ENSMUST00000234663	ENSMUSP00000157325	TRANSLATION	protein_coding	stop	-	-	79	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000024256	Adcyap1	ENSMUST00000234646	ENSMUSP00000157252	TRANSLATION	protein_coding	stop	-	-	27	0	0	0	0	0	-2,-6	-	-	-1	MINOR
ENSMUSG00000024256	Adcyap1	ENSMUST00000234204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024256	Adcyap1	ENSMUST00000064775	ENSMUSP00000067057	TRANSLATION	protein_coding	-	CCDS29029.1	1	175	0	1	7.5	85.5	0	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000024256	Adcyap1	ENSMUST00000234081	ENSMUSP00000157279	TRANSLATION	protein_coding	-	CCDS29029.1	-	175	0	1	7.5	85.5	0	0,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000098374	Gm28043	ENSMUST00000130871	ENSMUSP00000117838	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	719	8	9.9	0	131.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000048602	Morc2b	ENSMUST00000053896	ENSMUSP00000056879	TRANSLATION	protein_coding	-	CCDS37561.1	1	1022	9	0	0.5	152	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048602	Morc2b	ENSMUST00000131954	ENSMUSP00000123354	TRANSLATION	protein_coding	-	CCDS37561.1	-	1022	9	0	0.5	152	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048602	Morc2b	ENSMUST00000234062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024014	Pim1	ENSMUST00000024811	ENSMUSP00000024811	TRANSLATION	protein_coding	-	CCDS79520.1	1	313	3	6	9.5	219.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024014	Pim1	ENSMUST00000234650	ENSMUSP00000157125	TRANSLATION	protein_coding	start/stop	-	-	195	3	3.25	0	121.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024014	Pim1	ENSMUST00000234665	ENSMUSP00000157217	TRANSLATION	protein_coding	-	-	-	79	0	1.75	0	30.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024014	Pim1	ENSMUST00000234478	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024014	Pim1	ENSMUST00000234263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024014	Pim1	ENSMUST00000234294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024014	Pim1	ENSMUST00000234270	ENSMUSP00000156987	TRANSLATION	protein_coding	-	-	-	79	0	1.75	0	30.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040276	Pacsin1	ENSMUST00000114872	ENSMUSP00000110522	TRANSLATION	protein_coding	start	-	1	320	0	4.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040276	Pacsin1	ENSMUST00000231350	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040276	Pacsin1	ENSMUST00000231236	ENSMUSP00000155877	TRANSLATION	protein_coding	stop	-	-	109	6	2.5	0	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040276	Pacsin1	ENSMUST00000097360	ENSMUSP00000094973	TRANSLATION	protein_coding	-	CCDS28567.1	1	441	6	9.63	7.5	126.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040276	Pacsin1	ENSMUST00000231669	ENSMUSP00000156003	TRANSLATION	protein_coding	-	CCDS28567.1	-	441	6	9.63	7.5	126.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040276	Pacsin1	ENSMUST00000114873	ENSMUSP00000110523	TRANSLATION	protein_coding	-	CCDS28567.1	1	441	6	9.63	7.5	126.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040276	Pacsin1	ENSMUST00000155259	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040276	Pacsin1	ENSMUST00000232225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040276	Pacsin1	ENSMUST00000232437	ENSMUSP00000155999	TRANSLATION	protein_coding	-	CCDS28567.1	-	441	6	9.63	7.5	126.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040276	Pacsin1	ENSMUST00000231854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040276	Pacsin1	ENSMUST00000045896	ENSMUSP00000044168	TRANSLATION	protein_coding	-	CCDS28567.1	1	441	6	9.63	7.5	126.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024207	Acsbg2	ENSMUST00000043062	ENSMUSP00000042352	TRANSLATION	protein_coding	-	CCDS28916.1	1	667	23	5.825	1.5	303.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073436	Eme2	ENSMUST00000145882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073436	Eme2	ENSMUST00000140688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073436	Eme2	ENSMUST00000121542	ENSMUSP00000113936	TRANSLATION	protein_coding	-	CCDS50023.1	1	373	0	4.98	0.5	37.2	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073436	Eme2	ENSMUST00000139754	ENSMUSP00000118245	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	0.14	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000073436	Eme2	ENSMUST00000127293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073436	Eme2	ENSMUST00000128953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073436	Eme2	ENSMUST00000156659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073436	Eme2	ENSMUST00000119848	ENSMUSP00000113167	TRANSLATION	protein_coding	-	-	1	352	0	3.83	0	37.2	0	-4,-1	-	-	9.702	MINOR
ENSMUSG00000057835	Zfp119a	ENSMUST00000079642	ENSMUSP00000078587	TRANSLATION	protein_coding	-	CCDS37656.1	1	545	42	2.2	0.5	213.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024107	Lhcgr	ENSMUST00000234368	ENSMUSP00000157318	TRANSLATION	nonsense_mediated_decay	-	-	-	251	0	5.42	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000024107	Lhcgr	ENSMUST00000234881	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024107	Lhcgr	ENSMUST00000234269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024107	Lhcgr	ENSMUST00000024916	ENSMUSP00000024916	TRANSLATION	protein_coding	-	CCDS29025.1	1	700	0	7.87	1.5	99.7	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000059408	Mrgprh	ENSMUST00000075296	ENSMUSP00000074768	TRANSLATION	protein_coding	-	CCDS28395.1	-	321	0	0.2	1.5	43.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024446	Rpp21	ENSMUST00000173122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024446	Rpp21	ENSMUST00000173486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024446	Rpp21	ENSMUST00000172573	ENSMUSP00000133400	TRANSLATION	nonsense_mediated_decay	start	-	3	51	3	0.6	0	36.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024446	Rpp21	ENSMUST00000025319	ENSMUSP00000025319	TRANSLATION	protein_coding	-	CCDS28719.1	1	150	4	1.73	1.5	88.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024446	Rpp21	ENSMUST00000077535	ENSMUSP00000076739	TRANSLATION	protein_coding	-	-	1	71	0	0.3	0	0	0	-4,-5	-	-	1.038	MINOR
ENSMUSG00000024446	Rpp21	ENSMUST00000174824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024292	Cyp4f14	ENSMUST00000235058	ENSMUSP00000157006	TRANSLATION	protein_coding	-	CCDS28621.1	-	524	30	8.63	5.1	450.7	1	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000024292	Cyp4f14	ENSMUST00000179434	ENSMUSP00000136139	TRANSLATION	protein_coding	-	CCDS28621.1	5	524	30	8.63	5.1	450.7	1	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000024292	Cyp4f14	ENSMUST00000054174	ENSMUSP00000050478	TRANSLATION	protein_coding	-	CCDS28621.1	1	524	30	8.63	5.1	450.7	1	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000024292	Cyp4f14	ENSMUST00000234759	ENSMUSP00000157036	TRANSLATION	protein_coding	-	CCDS28621.1	-	524	30	8.63	5.1	450.7	1	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000024292	Cyp4f14	ENSMUST00000234538	ENSMUSP00000157156	TRANSLATION	protein_coding	stop	-	-	243	6	2.94	0	109.8	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000024292	Cyp4f14	ENSMUST00000234797	ENSMUSP00000157346	TRANSLATION	protein_coding	stop	-	-	159	5	1.35	0	53.7	1	-1,-4	-	-	-1	MINOR
ENSMUSG00000116953	9030025P20Rik	ENSMUST00000061688	ENSMUSP00000060857	TRANSLATION	protein_coding	-	CCDS49960.1	1	438	0	0	0.5	83.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000116953	9030025P20Rik	ENSMUST00000232182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116953	9030025P20Rik	ENSMUST00000231253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000116953	9030025P20Rik	ENSMUST00000231723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092609	Gm20481	ENSMUST00000173680	ENSMUSP00000133726	TRANSLATION	protein_coding	stop	-	3	153	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000035868	Zfp983	ENSMUST00000232827	ENSMUSP00000156443	TRANSLATION	protein_coding	-	CCDS49994.1	-	460	40	1.6	0.5	308.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000035868	Zfp983	ENSMUST00000039726	ENSMUSP00000039392	TRANSLATION	protein_coding	-	CCDS49994.1	1	460	40	1.6	0.5	308.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024006	Stk38	ENSMUST00000129094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000145298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000141431	ENSMUSP00000156592	TRANSLATION	protein_coding	start	-	3	261	5	5.9266	0	146.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000144299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000233606	ENSMUSP00000156699	TRANSLATION	nonsense_mediated_decay	-	-	-	132	9	2.92	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000232724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024006	Stk38	ENSMUST00000233864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024006	Stk38	ENSMUST00000233093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000233329	ENSMUSP00000156610	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000156732	ENSMUSP00000156467	TRANSLATION	protein_coding	start	-	3	14	0	0.1386	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000142366	ENSMUSP00000156577	TRANSLATION	nonsense_mediated_decay	-	-	1	61	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000142923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024006	Stk38	ENSMUST00000126893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024006	Stk38	ENSMUST00000140355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000009138	ENSMUSP00000009138	TRANSLATION	protein_coding	-	CCDS28589.1	1	465	20	10.2486	19.5	226	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024006	Stk38	ENSMUST00000232723	ENSMUSP00000156597	TRANSLATION	protein_coding	-	-	-	117	5	2.12	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000119274	ENSMUSP00000113657	TRANSLATION	protein_coding	-	CCDS28589.1	1	465	20	10.2486	19.5	226	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024006	Stk38	ENSMUST00000233510	ENSMUSP00000156784	TRANSLATION	nonsense_mediated_decay	-	-	-	58	0	0.6	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000126671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000232836	ENSMUSP00000156711	TRANSLATION	protein_coding	-	CCDS28589.1	-	465	20	10.2486	19.5	226	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024006	Stk38	ENSMUST00000233441	ENSMUSP00000156829	TRANSLATION	protein_coding	stop	-	-	307	20	6.18	0	158.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024006	Stk38	ENSMUST00000125070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024006	Stk38	ENSMUST00000233723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000126619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024006	Stk38	ENSMUST00000144516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095253	Zfp799	ENSMUST00000201876	ENSMUSP00000144187	TRANSLATION	protein_coding	-	-	3	73	0	1.3	0	70.6	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000095253	Zfp799	ENSMUST00000201499	ENSMUSP00000143907	TRANSLATION	protein_coding	-	CCDS79529.1	1	64	0	1.3	0.5	70.6	0	-4,-5	-	-	4.59	MINOR
ENSMUSG00000095253	Zfp799	ENSMUST00000179695	ENSMUSP00000136298	TRANSLATION	protein_coding	start	-	3	647	64	1.7	0.5	296.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095253	Zfp799	ENSMUST00000202988	ENSMUSP00000144480	TRANSLATION	protein_coding	-	CCDS79530.1	1	648	64	1.7	0.5	296.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095253	Zfp799	ENSMUST00000202759	ENSMUSP00000144087	TRANSLATION	protein_coding	stop	-	2	73	0	1.3	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023959	Clic5	ENSMUST00000239215	ENSMUSP00000159274	TRANSLATION	protein_coding	-	-	-	485	17	5	0.5	59.2	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000023959	Clic5	ENSMUST00000024755	ENSMUSP00000024755	TRANSLATION	protein_coding	-	CCDS28804.1	1	251	17	5.75	9.7	59.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000023959	Clic5	ENSMUST00000233193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063576	Klhdc3	ENSMUST00000232776	ENSMUSP00000156502	TRANSLATION	protein_coding	stop	-	-	238	0	2.795	0	135.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000063576	Klhdc3	ENSMUST00000165007	ENSMUSP00000128271	TRANSLATION	protein_coding	-	CCDS28834.1	1	382	0	4.524	11.5	168.5	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000063576	Klhdc3	ENSMUST00000233733	ENSMUSP00000156682	TRANSLATION	protein_coding	-	-	-	373	0	4.524	0	168.5	0	-4,-1	-	-	12	MINOR
ENSMUSG00000063576	Klhdc3	ENSMUST00000233524	ENSMUSP00000156731	TRANSLATION	protein_coding	stop	-	-	104	0	1.4	0	36.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063576	Klhdc3	ENSMUST00000071841	ENSMUSP00000071743	TRANSLATION	protein_coding	-	CCDS28834.1	1	382	0	4.524	11.5	168.5	0	-4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000024224	Clpsl2	ENSMUST00000025061	ENSMUSP00000025061	TRANSLATION	protein_coding	-	CCDS50047.1	1	102	0	0	1.5	51.9	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000182281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034165	Ccnd3	ENSMUST00000183158	ENSMUSP00000138169	TRANSLATION	protein_coding	stop	-	2	99	0	2.16	0	92	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000037333	ENSMUSP00000040488	TRANSLATION	protein_coding	-	CCDS28850.1	1	292	0	8.23	7.5	182.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000182591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034165	Ccnd3	ENSMUST00000183206	ENSMUSP00000138745	TRANSLATION	protein_coding	stop	-	3	29	0	0.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000183061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034165	Ccnd3	ENSMUST00000182209	ENSMUSP00000138091	TRANSLATION	protein_coding	-	CCDS28850.1	1	292	0	8.23	7.5	182.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000183014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034165	Ccnd3	ENSMUST00000183210	ENSMUSP00000138658	TRANSLATION	protein_coding	stop	-	5	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182129	ENSMUSP00000138486	TRANSLATION	protein_coding	stop	-	5	214	0	5.16	0	157	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034165	Ccnd3	ENSMUST00000171031	ENSMUSP00000126141	TRANSLATION	protein_coding	-	CCDS28850.1	5	292	0	8.23	7.5	182.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000182846	ENSMUSP00000138334	TRANSLATION	protein_coding	start	-	3	125	0	2.91	0	81.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182539	ENSMUSP00000138458	TRANSLATION	protein_coding	-	-	2	96	0	3.57	6.5	34.6	0	-2,-3	-	-	2.538	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182874	ENSMUSP00000138711	TRANSLATION	protein_coding	stop	-	5	119	0	2.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182935	ENSMUSP00000138273	TRANSLATION	protein_coding	stop	-	3	43	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000182848	ENSMUSP00000138715	TRANSLATION	protein_coding	stop	-	5	243	0	6.32	0	171.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000183256	ENSMUSP00000138528	TRANSLATION	protein_coding	stop	-	5	75	0	2.74	0	35.3	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000034165	Ccnd3	ENSMUST00000183044	ENSMUSP00000138220	TRANSLATION	protein_coding	-	CCDS28850.1	1	292	0	8.23	7.5	182.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000183177	ENSMUSP00000138640	TRANSLATION	protein_coding	-	CCDS28850.1	5	292	0	8.23	7.5	182.2	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000034165	Ccnd3	ENSMUST00000182506	ENSMUSP00000138180	TRANSLATION	protein_coding	stop	-	5	250	0	6.65	0	179	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063660	Olfr98	ENSMUST00000080759	ENSMUSP00000094936	TRANSLATION	protein_coding	-	CCDS28742.1	-	309	0	0.42	2.7	177.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024369	Nelfe	ENSMUST00000165953	ENSMUSP00000131195	TRANSLATION	protein_coding	-	CCDS28662.1	1	367	0	2.9	0.5	42.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024369	Nelfe	ENSMUST00000174888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024369	Nelfe	ENSMUST00000173357	ENSMUSP00000134272	TRANSLATION	protein_coding	-	CCDS28662.1	1	367	0	2.9	0.5	42.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024369	Nelfe	ENSMUST00000173065	ENSMUSP00000133934	TRANSLATION	protein_coding	stop	-	2	228	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024369	Nelfe	ENSMUST00000097343	ENSMUSP00000094956	TRANSLATION	protein_coding	-	CCDS28662.1	5	367	0	2.9	0.5	42.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024369	Nelfe	ENSMUST00000174075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024369	Nelfe	ENSMUST00000173775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052712	BC004004	ENSMUST00000234012	ENSMUSP00000157314	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234773	ENSMUSP00000157182	TRANSLATION	protein_coding	-	CCDS28594.1	-	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000149405	ENSMUSP00000117309	TRANSLATION	protein_coding	-	CCDS28594.1	5	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000235050	ENSMUSP00000157372	TRANSLATION	protein_coding	-	-	-	72	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234377	ENSMUSP00000157214	TRANSLATION	protein_coding	-	-	-	387	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234028	ENSMUSP00000157326	TRANSLATION	nonsense_mediated_decay	-	-	-	232	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000235114	ENSMUSP00000157339	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234326	ENSMUSP00000157211	TRANSLATION	protein_coding	-	-	-	331	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000235117	ENSMUSP00000157150	TRANSLATION	protein_coding	-	-	-	288	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234631	ENSMUSP00000157108	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234845	ENSMUSP00000157073	TRANSLATION	protein_coding	stop	-	-	165	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234820	ENSMUSP00000157262	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234459	ENSMUSP00000157083	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000064709	ENSMUSP00000066224	TRANSLATION	protein_coding	-	CCDS28594.1	1	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000234054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052712	BC004004	ENSMUST00000234714	ENSMUSP00000157343	TRANSLATION	protein_coding	stop	-	-	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000234711	ENSMUSP00000157208	TRANSLATION	protein_coding	-	CCDS28594.1	-	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000150874	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052712	BC004004	ENSMUST00000235023	ENSMUSP00000157274	TRANSLATION	protein_coding	-	CCDS28594.1	-	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000234256	ENSMUSP00000157363	TRANSLATION	protein_coding	-	CCDS28594.1	-	348	0	0	7.5	0	2	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000052712	BC004004	ENSMUST00000156215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052712	BC004004	ENSMUST00000234234	ENSMUSP00000157251	TRANSLATION	protein_coding	stop	-	-	137	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000235074	ENSMUSP00000157090	TRANSLATION	protein_coding	stop	-	-	96	0	0	0	0	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000235038	ENSMUSP00000157134	TRANSLATION	protein_coding	stop	-	-	220	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000120346	ENSMUSP00000113315	TRANSLATION	protein_coding	-	-	5	288	0	0	0	0	2	-4,-5	-	-	0	MINOR
ENSMUSG00000052712	BC004004	ENSMUST00000235040	ENSMUSP00000157227	TRANSLATION	protein_coding	stop	-	-	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041199	Rpusd1	ENSMUST00000235645	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041199	Rpusd1	ENSMUST00000237785	ENSMUSP00000158547	TRANSLATION	protein_coding	-	CCDS28524.1	-	306	2	5.08	2.7	88.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000041199	Rpusd1	ENSMUST00000047273	ENSMUSP00000043825	TRANSLATION	protein_coding	-	CCDS28524.1	1	306	2	5.08	2.7	88.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000041199	Rpusd1	ENSMUST00000237183	ENSMUSP00000158085	TRANSLATION	protein_coding	-	-	-	177	0	2.33	1.5	30.9	0	-4,-5	-	-	2.592	MINOR
ENSMUSG00000024215	Spdef	ENSMUST00000138970	ENSMUSP00000117743	TRANSLATION	protein_coding	stop	-	5	126	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024215	Spdef	ENSMUST00000025054	ENSMUSP00000025054	TRANSLATION	protein_coding	-	CCDS28568.1	1	325	0	3.43	1.5	195.7	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000024215	Spdef	ENSMUST00000233880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024215	Spdef	ENSMUST00000114870	ENSMUSP00000110520	TRANSLATION	protein_coding	-	-	5	309	0	3.33	0	195.7	0	-4,-7	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000024215	Spdef	ENSMUST00000127622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024215	Spdef	ENSMUST00000167489	ENSMUSP00000127056	TRANSLATION	protein_coding	-	CCDS28568.1	5	325	0	3.43	1.5	195.7	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038541	Srd5a2	ENSMUST00000043458	ENSMUSP00000048862	TRANSLATION	protein_coding	-	CCDS28968.1	1	254	0	0	1.5	198.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000032739	Pram1	ENSMUST00000052079	ENSMUSP00000057065	TRANSLATION	protein_coding	-	CCDS37569.1	1	675	0	1.73	0.5	106.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000032739	Pram1	ENSMUST00000116619	ENSMUSP00000112318	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032739	Pram1	ENSMUST00000166215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000092511	Gm20547	ENSMUST00000146299	ENSMUSP00000117677	TRANSLATION	protein_coding,RT	-	-	5	1276	21	26.3	0	539.8	0	3,-2	-	-	-1	PRINCIPAL:5
ENSMUSG00000092511	Gm20547	ENSMUST00000129891	ENSMUSP00000120864	TRANSLATION	protein_coding,RT	start	-	5	971	18	22.8	0	471.1	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000033739	Fkbpl	ENSMUST00000174796	ENSMUSP00000133960	TRANSLATION	protein_coding	stop	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033739	Fkbpl	ENSMUST00000036720	ENSMUSP00000037273	TRANSLATION	protein_coding	-	CCDS28654.1	1	347	0	0.42	1.5	52.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000004864	Mapk13	ENSMUST00000129096	ENSMUSP00000115659	TRANSLATION	nonsense_mediated_decay	-	-	5	257	18	5.58	0	158.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000133786	ENSMUSP00000156911	TRANSLATION	nonsense_mediated_decay	-	-	3	62	5	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000004986	ENSMUSP00000004986	TRANSLATION	protein_coding	start	-	1	308	20	8.74	0	198.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000233109	ENSMUSP00000156487	TRANSLATION	protein_coding	stop	-	-	266	19	7.41	0	161.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000233676	ENSMUSP00000156787	TRANSLATION	nonsense_mediated_decay	-	-	-	227	18	5.58	0	159.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000233984	ENSMUSP00000156387	TRANSLATION	protein_coding	-	CCDS28584.1	-	366	21	10.24	7.6	235.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000004864	Mapk13	ENSMUST00000233051	ENSMUSP00000156822	TRANSLATION	nonsense_mediated_decay	-	-	-	40	5	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000233460	ENSMUSP00000156486	TRANSLATION	protein_coding	stop	-	-	186	16	5.08	0	69.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000004864	Mapk13	ENSMUST00000124099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024222	Fkbp5	ENSMUST00000232690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000143685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000177939	ENSMUSP00000136245	TRANSLATION	protein_coding	-	CCDS37528.1	5	456	3	10.5	7.5	203.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024222	Fkbp5	ENSMUST00000114792	ENSMUSP00000110440	TRANSLATION	protein_coding	-	CCDS37528.1	2	456	3	10.5	7.5	203.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024222	Fkbp5	ENSMUST00000233372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000233291	ENSMUSP00000156582	TRANSLATION	protein_coding	-	-	-	93	1	2.264	0	39.6	0	-4,-5	-	-	0.999	MINOR
ENSMUSG00000024222	Fkbp5	ENSMUST00000147716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024222	Fkbp5	ENSMUST00000233870	ENSMUSP00000156811	TRANSLATION	protein_coding	-	-	-	248	0	5.25	0	47.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024222	Fkbp5	ENSMUST00000079413	ENSMUSP00000078382	TRANSLATION	protein_coding	-	CCDS37528.1	1	456	3	10.5	7.5	203.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024222	Fkbp5	ENSMUST00000232939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000233102	ENSMUSP00000156418	TRANSLATION	protein_coding	-	CCDS37528.1	-	456	3	10.5	7.5	203.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024222	Fkbp5	ENSMUST00000233307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000233917	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000233747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024222	Fkbp5	ENSMUST00000153744	ENSMUSP00000116466	TRANSLATION	protein_coding	stop	-	5	191	3	4.75	0	105.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024330	Col11a2	ENSMUST00000137374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024330	Col11a2	ENSMUST00000173749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024330	Col11a2	ENSMUST00000114252	ENSMUSP00000109890	TRANSLATION	protein_coding	-	-	5	1655	5	28.18	4.1	512	0	2,-2	-	-	17.984	ALTERNATIVE:2
ENSMUSG00000024330	Col11a2	ENSMUST00000144927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024330	Col11a2	ENSMUST00000131134	ENSMUSP00000122082	TRANSLATION	protein_coding	-	-	1	1736	5	28.18	6.3	511.7	0	2,-2	-	-	18.796	PRINCIPAL:3
ENSMUSG00000024330	Col11a2	ENSMUST00000236837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024330	Col11a2	ENSMUST00000087497	ENSMUSP00000084772	TRANSLATION	protein_coding	-	CCDS28640.1	2	1650	5	28.18	2.9	512.1	0	2,-2	-	-	17.536	MINOR
ENSMUSG00000024330	Col11a2	ENSMUST00000237490	ENSMUSP00000157723	TRANSLATION	protein_coding	-	-	-	1715	5	28.18	0.5	512.1	0	2,-2	-	-	16.82	MINOR
ENSMUSG00000024330	Col11a2	ENSMUST00000235819	ENSMUSP00000157908	TRANSLATION	protein_coding	-	-	-	1710	5	28.18	1.7	512.4	0	2,-2	-	-	17.102	MINOR
ENSMUSG00000024330	Col11a2	ENSMUST00000143354	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024330	Col11a2	ENSMUST00000114255	ENSMUSP00000109893	TRANSLATION	protein_coding	-	-	5	1689	5	28.18	0.5	515.1	0	2,-2	-	-	17	MINOR
ENSMUSG00000024330	Col11a2	ENSMUST00000237989	ENSMUSP00000157425	TRANSLATION	protein_coding	-	-	-	1629	5	28.18	6.3	514.8	0	2,-2	-	-	18.982	ALTERNATIVE:1
ENSMUSG00000041062	Mslnl	ENSMUST00000047098	ENSMUSP00000049020	TRANSLATION	protein_coding	-	CCDS28525.1	1	685	0	0	0.5	226.3	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000024459	H2-M5	ENSMUST00000169189	ENSMUSP00000131365	TRANSLATION	protein_coding	-	CCDS50105.1	1	348	0	5.38	0.5	281.4	2	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024459	H2-M5	ENSMUST00000145260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024459	H2-M5	ENSMUST00000176712	ENSMUSP00000134912	TRANSLATION	protein_coding	start	-	5	318	0	5.08	0	273.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000024459	H2-M5	ENSMUST00000113667	ENSMUSP00000109297	TRANSLATION	protein_coding	start/stop	-	1	138	0	2.264	0	57.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024459	H2-M5	ENSMUST00000176784	ENSMUSP00000135262	TRANSLATION	protein_coding	start	-	5	327	0	5.08	0	273.1	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000025737	Wdr24	ENSMUST00000026833	ENSMUSP00000026833	TRANSLATION	protein_coding	-	CCDS28531.1	1	790	0	1.46	7.6	27.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000025737	Wdr24	ENSMUST00000160275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025737	Wdr24	ENSMUST00000160829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025737	Wdr24	ENSMUST00000160349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061972	Olfr99	ENSMUST00000216370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061972	Olfr99	ENSMUST00000216328	ENSMUSP00000148900	TRANSLATION	protein_coding	-	CCDS28743.1	5	305	0	0.42	2.7	196.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061972	Olfr99	ENSMUST00000077585	ENSMUSP00000076781	TRANSLATION	protein_coding	-	CCDS28743.1	-	305	0	0.42	2.7	196.6	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023918	Adgrf4	ENSMUST00000167993	ENSMUSP00000132890	TRANSLATION	protein_coding	-	CCDS50113.1	1	698	0	0	1.5	148.7	7	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000023918	Adgrf4	ENSMUST00000024711	ENSMUSP00000024711	TRANSLATION	protein_coding	-	CCDS50113.1	1	698	0	0	1.5	148.7	7	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000023918	Adgrf4	ENSMUST00000164524	ENSMUSP00000129114	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023918	Adgrf4	ENSMUST00000170723	ENSMUSP00000133261	TRANSLATION	protein_coding	-	CCDS50113.1	1	698	0	0	1.5	148.7	7	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000094168	Gm21903	ENSMUST00000178039	ENSMUSP00000136394	TRANSLATION	protein_coding	start/stop	-	5	30	0	0	0	24	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000060701	Fpr-rs3	ENSMUST00000071189	ENSMUSP00000071179	TRANSLATION	protein_coding	-	CCDS49989.1	-	343	0	0.48	1.5	121.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024109	Nrxn1	ENSMUST00000196269	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000176118	ENSMUSP00000135241	TRANSLATION	protein_coding	start/stop	-	5	213	0	4.165	0	80.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000197104	ENSMUSP00000142621	TRANSLATION	protein_coding	start/stop	-	5	186	2	2	0	46.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000161637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024109	Nrxn1	ENSMUST00000160800	ENSMUSP00000124561	TRANSLATION	protein_coding	-	CCDS57112.1	1	1495	12	17.801	6.5	606	4	3,-2	-	-	19.875	ALTERNATIVE:1
ENSMUSG00000024109	Nrxn1	ENSMUST00000198899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000159419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000172466	ENSMUSP00000134402	TRANSLATION	protein_coding	-	CCDS84342.1	5	465	4	6.08	6.5	116.9	5	-3,-6	-	-	2.541	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000174331	ENSMUSP00000133491	TRANSLATION	protein_coding	-	-	5	1477	12	16.801	6.5	600.2	4	3,-2	-	-	17.529	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000197268	ENSMUSP00000142815	TRANSLATION	protein_coding	-	CCDS84339.1	3	139	0	0	9.8	34.1	4	-4,-5	-	-	3	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000054059	ENSMUSP00000057294	TRANSLATION	protein_coding	-	-	5	1499	12	17.801	6.5	606	4	3,-2	-	-	19.875	ALTERNATIVE:1
ENSMUSG00000024109	Nrxn1	ENSMUST00000196559	ENSMUSP00000142891	TRANSLATION	protein_coding	start	-	3	172	1	3.66	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000173917	ENSMUSP00000133389	TRANSLATION	protein_coding	-	CCDS84338.1	2	142	0	0	5.3	34.1	4	-4,-5	-	-	1.467	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000161402	ENSMUSP00000124116	TRANSLATION	protein_coding	-	-	5	1514	12	17.636	2.4	596	4	3,-2	-	-	17.547	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000159778	ENSMUSP00000125561	TRANSLATION	protein_coding	-	CCDS84340.1	5	438	4	5.08	6.5	119.2	5	-3,-6	-	-	2.541	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000160467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000173222	ENSMUSP00000146701	TRANSLATION	protein_coding	-	-	1	75	0	0	0	32.4	4	2,-2	-	-	0	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000161102	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000197224	ENSMUSP00000142650	TRANSLATION	protein_coding	start/stop	-	5	169	2	1.66	0	64	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000162227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000176918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024109	Nrxn1	ENSMUST00000162002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024109	Nrxn1	ENSMUST00000177342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024109	Nrxn1	ENSMUST00000174337	ENSMUSP00000133724	TRANSLATION	protein_coding	-	CCDS84341.1	5	468	4	6.08	6.5	116.9	5	-3,-6	-	-	2.541	MINOR
ENSMUSG00000024109	Nrxn1	ENSMUST00000072671	ENSMUSP00000072458	TRANSLATION	protein_coding	-	-	5	1496	12	17.801	6.5	606	4	3,-2	-	-	19.875	ALTERNATIVE:1
ENSMUSG00000024109	Nrxn1	ENSMUST00000160844	ENSMUSP00000125407	TRANSLATION	protein_coding	-	CCDS57113.1	1	1507	12	17.801	7.5	597.9	4	3,-2	-	-	19.731	PRINCIPAL:4
ENSMUSG00000014763	Fam120b	ENSMUST00000055352	ENSMUSP00000054420	TRANSLATION	protein_coding	-	CCDS37453.1	1	786	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000014763	Fam120b	ENSMUST00000231318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014763	Fam120b	ENSMUST00000231274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023938	Aars2	ENSMUST00000024733	ENSMUSP00000024733	TRANSLATION	protein_coding	-	CCDS28809.1	1	980	21	15.05	0.5	614.6	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000023938	Aars2	ENSMUST00000232693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023938	Aars2	ENSMUST00000233523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023938	Aars2	ENSMUST00000233391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182951	ENSMUSP00000138395	TRANSLATION	nonsense_mediated_decay	start	-	5	169	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071054	Safb	ENSMUST00000095224	ENSMUSP00000092849	TRANSLATION	protein_coding	-	CCDS50152.1	5	937	0	1.76	0.5	86.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071054	Safb	ENSMUST00000182461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182533	ENSMUSP00000138277	TRANSLATION	protein_coding	-	-	5	939	0	1.76	0.5	86.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071054	Safb	ENSMUST00000182159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000183318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182800	ENSMUSP00000138743	TRANSLATION	protein_coding	stop	-	3	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071054	Safb	ENSMUST00000182913	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000182454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071054	Safb	ENSMUST00000183041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024048	Myl12a	ENSMUST00000024846	ENSMUSP00000024846	TRANSLATION	protein_coding	-	CCDS28955.1	2	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000148960	ENSMUSP00000123412	TRANSLATION	protein_coding	-	CCDS28955.1	1	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000126529	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024048	Myl12a	ENSMUST00000128179	ENSMUSP00000119491	TRANSLATION	protein_coding	stop	-	2	58	7	1	0	30.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024048	Myl12a	ENSMUST00000129093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024048	Myl12a	ENSMUST00000123686	ENSMUSP00000116398	TRANSLATION	protein_coding	-	CCDS28955.1	5	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000232766	ENSMUSP00000156508	TRANSLATION	protein_coding	-	CCDS28955.1	-	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000233089	ENSMUSP00000156522	TRANSLATION	protein_coding	-	CCDS28955.1	-	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000233798	ENSMUSP00000156693	TRANSLATION	protein_coding	-	CCDS28955.1	-	172	7	3.33	21.5	81.1	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024048	Myl12a	ENSMUST00000150456	ENSMUSP00000114712	TRANSLATION	protein_coding	stop	-	3	107	7	2	0	64.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056492	Adgrf5	ENSMUST00000113599	ENSMUSP00000109229	TRANSLATION	protein_coding	-	CCDS37622.1	5	1348	0	0.45	1.5	290.7	7	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056492	Adgrf5	ENSMUST00000225962	ENSMUSP00000153373	TRANSLATION	protein_coding	start	-	-	1143	0	0.45	0	251.8	7	-4,-5	-	-	-1	MINOR
ENSMUSG00000056492	Adgrf5	ENSMUST00000225466	ENSMUSP00000153704	TRANSLATION	protein_coding	stop	-	-	82	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056492	Adgrf5	ENSMUST00000226087	ENSMUSP00000153049	TRANSLATION	protein_coding	-	CCDS37622.1	-	1348	0	0.45	1.5	290.7	7	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056492	Adgrf5	ENSMUST00000224278	ENSMUSP00000152923	TRANSLATION	protein_coding	stop	-	-	149	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056492	Adgrf5	ENSMUST00000225004	ENSMUSP00000153304	TRANSLATION	nonsense_mediated_decay	start	-	-	142	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024030	Abcg1	ENSMUST00000236391	ENSMUSP00000157735	TRANSLATION	protein_coding	stop	-	-	257	14	4.45	0	94.8	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024030	Abcg1	ENSMUST00000236427	ENSMUSP00000157670	TRANSLATION	protein_coding	-	-	-	104	0	0.9	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000024030	Abcg1	ENSMUST00000236241	ENSMUSP00000157940	TRANSLATION	protein_coding	start	-	-	146	0	1.62	0	42.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024030	Abcg1	ENSMUST00000139013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024030	Abcg1	ENSMUST00000024829	ENSMUSP00000024829	TRANSLATION	protein_coding	-	CCDS28602.1	1	666	14	9.33	6.4	256.1	0	-3,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000045027	Prss22	ENSMUST00000041649	ENSMUSP00000039808	TRANSLATION	protein_coding	-	CCDS37482.1	1	307	5	3.666	2.7	218.9	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000038954	Supt3	ENSMUST00000050630	ENSMUSP00000050783	TRANSLATION	protein_coding	-	CCDS37625.1	1	374	0	0	1.7	118.7	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000038954	Supt3	ENSMUST00000127798	ENSMUSP00000121148	TRANSLATION	protein_coding	stop	-	1	382	0	0	0.5	118.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000038954	Supt3	ENSMUST00000130623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038954	Supt3	ENSMUST00000129416	ENSMUSP00000120197	TRANSLATION	protein_coding	start/stop	-	1	406	0	0	0	118.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000228750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032855	Pkd1	ENSMUST00000227058	ENSMUSP00000153867	TRANSLATION	protein_coding	start/stop	-	-	237	0	1.254	0	87.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000227107	ENSMUSP00000154792	TRANSLATION	nonsense_mediated_decay	start	-	-	1231	0	0	0	273.7	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000226178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032855	Pkd1	ENSMUST00000035565	ENSMUSP00000049296	TRANSLATION	protein_coding	-	CCDS28485.1	1	4293	0	7.694	0.5	1688.8	3	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000032855	Pkd1	ENSMUST00000228745	ENSMUSP00000153873	TRANSLATION	protein_coding	start/stop	-	-	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000228550	ENSMUSP00000154062	TRANSLATION	protein_coding	-	-	-	72	0	0	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000228581	ENSMUSP00000154141	TRANSLATION	nonsense_mediated_decay	start	-	-	27	0	0.15	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000226883	ENSMUSP00000154668	TRANSLATION	nonsense_mediated_decay	start	-	-	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032855	Pkd1	ENSMUST00000227836	ENSMUSP00000154626	TRANSLATION	protein_coding	start/stop	-	-	234	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000039512	Uhrf1bp1	ENSMUST00000137825	ENSMUSP00000156562	TRANSLATION	nonsense_mediated_decay	start	-	5	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039512	Uhrf1bp1	ENSMUST00000114849	ENSMUSP00000110499	TRANSLATION	protein_coding	-	CCDS37524.1	1	1429	0	0	0.5	56.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000039512	Uhrf1bp1	ENSMUST00000233809	ENSMUSP00000156621	TRANSLATION	protein_coding	stop	-	-	177	0	0	0	56.5	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000039512	Uhrf1bp1	ENSMUST00000130810	ENSMUSP00000156612	TRANSLATION	protein_coding	stop	-	3	123	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039512	Uhrf1bp1	ENSMUST00000233409	ENSMUSP00000156545	TRANSLATION	protein_coding	start	-	-	150	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024013	Fgd2	ENSMUST00000138537	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000137644	ENSMUSP00000157303	TRANSLATION	protein_coding	-	-	5	316	8	4.81	0	100.2	0	-4,-7	-	-	6	MINOR
ENSMUSG00000024013	Fgd2	ENSMUST00000146800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000144616	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024013	Fgd2	ENSMUST00000235007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000234838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000123989	ENSMUSP00000118828	TRANSLATION	nonsense_mediated_decay	-	-	5	391	0	3.04	0.5	89	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024013	Fgd2	ENSMUST00000235065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000145124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024013	Fgd2	ENSMUST00000024810	ENSMUSP00000024810	TRANSLATION	protein_coding	-	CCDS37537.1	1	655	8	8.85	1.5	283.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024013	Fgd2	ENSMUST00000234163	ENSMUSP00000157333	TRANSLATION	nonsense_mediated_decay	-	-	-	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024013	Fgd2	ENSMUST00000140918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024312	Wdr46	ENSMUST00000173857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024312	Wdr46	ENSMUST00000172546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024312	Wdr46	ENSMUST00000234334	ENSMUSP00000157147	TRANSLATION	protein_coding	start	-	-	329	0	1.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024312	Wdr46	ENSMUST00000025170	ENSMUSP00000025170	TRANSLATION	protein_coding	-	CCDS28637.1	1	622	0	1.88	0.5	111.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000007036	Abhd16a	ENSMUST00000007251	ENSMUSP00000007251	TRANSLATION	protein_coding	-	CCDS28681.1	1	558	0	0	7.5	33	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000007036	Abhd16a	ENSMUST00000173247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007036	Abhd16a	ENSMUST00000173134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007036	Abhd16a	ENSMUST00000173846	ENSMUSP00000133505	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000007036	Abhd16a	ENSMUST00000173579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007036	Abhd16a	ENSMUST00000172584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007036	Abhd16a	ENSMUST00000173190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016946	Kctd5	ENSMUST00000127755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016946	Kctd5	ENSMUST00000234555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016946	Kctd5	ENSMUST00000017090	ENSMUSP00000017090	TRANSLATION	protein_coding	-	CCDS28473.1	1	234	0	5.33	8.8	81.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000023830	Igf2r	ENSMUST00000161738	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023830	Igf2r	ENSMUST00000024599	ENSMUSP00000024599	TRANSLATION	protein_coding	-	CCDS37436.1	1	2483	5	25	0.5	1380.1	0	2,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000023830	Igf2r	ENSMUST00000159127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002280	Ciao3	ENSMUST00000131458	ENSMUSP00000120281	TRANSLATION	nonsense_mediated_decay	-	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002280	Ciao3	ENSMUST00000130861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002280	Ciao3	ENSMUST00000154711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002280	Ciao3	ENSMUST00000236424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002280	Ciao3	ENSMUST00000002350	ENSMUSP00000002350	TRANSLATION	protein_coding	-	CCDS50034.1	1	476	21	5.79	7.5	30.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000002280	Ciao3	ENSMUST00000149645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002280	Ciao3	ENSMUST00000134108	ENSMUSP00000117136	TRANSLATION	protein_coding	-	-	1	492	21	5.79	0	30.2	0	-4,-5	-	-	18	MINOR
ENSMUSG00000002280	Ciao3	ENSMUST00000237541	ENSMUSP00000157987	TRANSLATION	protein_coding	-	-	-	377	15	4.37	0	0	0	-4,-5	-	-	5.16	MINOR
ENSMUSG00000075705	Msrb1	ENSMUST00000101800	ENSMUSP00000099300	TRANSLATION	protein_coding	-	CCDS28495.1	1	116	7	2.83	8.8	83.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000075705	Msrb1	ENSMUST00000115262	ENSMUSP00000110917	TRANSLATION	protein_coding	-	CCDS28495.1	1	116	7	2.83	8.8	83.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000002274	Metrn	ENSMUST00000002344	ENSMUSP00000002344	TRANSLATION	protein_coding	-	CCDS28529.1	5	291	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000002274	Metrn	ENSMUST00000165838	ENSMUSP00000127275	TRANSLATION	protein_coding	-	CCDS28529.1	1	291	0	0	0.5	0	0	2,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000002274	Metrn	ENSMUST00000235925	ENSMUSP00000158455	TRANSLATION	protein_coding	-	-	-	89	0	0	0	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000002274	Metrn	ENSMUST00000235294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002274	Metrn	ENSMUST00000238040	ENSMUSP00000157829	TRANSLATION	protein_coding	-	-	-	221	0	0	0	0	0	2,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000002274	Metrn	ENSMUST00000236963	ENSMUSP00000157474	TRANSLATION	protein_coding	-	-	-	285	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000002274	Metrn	ENSMUST00000237849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073375	Lrrc30	ENSMUST00000097290	ENSMUSP00000094893	TRANSLATION	protein_coding	-	CCDS28949.1	-	300	0	0.6	7.5	36.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033475	Tomm6	ENSMUST00000113301	ENSMUSP00000108926	TRANSLATION	protein_coding	-	CCDS37643.1	2	74	0	0	6.3	151.8	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000033475	Tomm6	ENSMUST00000113302	ENSMUSP00000108927	TRANSLATION	protein_coding	-	CCDS37643.1	1	74	0	0	6.3	151.8	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000033475	Tomm6	ENSMUST00000143156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067941	Gm7168	ENSMUST00000088809	ENSMUSP00000094997	TRANSLATION	protein_coding	-	CCDS49956.1	1	508	18	0.6	0.5	231.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034923	Ly6g6f	ENSMUST00000038507	ENSMUSP00000046380	TRANSLATION	protein_coding	-	CCDS50083.1	1	300	0	0	3.9	34.9	0	2,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000073421	H2-Ab1	ENSMUST00000173103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073421	H2-Ab1	ENSMUST00000040828	ENSMUSP00000041008	TRANSLATION	protein_coding	-	CCDS37583.1	1	265	0	3.95	1.5	226.7	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000073421	H2-Ab1	ENSMUST00000237866	ENSMUSP00000157806	TRANSLATION	protein_coding	-	-	-	174	0	2.95	0	96.6	1	2,-2	-	-	4.002	MINOR
ENSMUSG00000073421	H2-Ab1	ENSMUST00000236643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073421	H2-Ab1	ENSMUST00000237429	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073421	H2-Ab1	ENSMUST00000174875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073421	H2-Ab1	ENSMUST00000235980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073421	H2-Ab1	ENSMUST00000237342	ENSMUSP00000157600	TRANSLATION	protein_coding	stop	-	-	192	0	2.6	0	208.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000023861	Mpc1	ENSMUST00000142594	ENSMUSP00000119901	TRANSLATION	protein_coding	-	-	5	167	0	0	0	117.3	1	-4,-7	-	-	5.994	MINOR
ENSMUSG00000023861	Mpc1	ENSMUST00000137344	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023861	Mpc1	ENSMUST00000130559	ENSMUSP00000116307	TRANSLATION	protein_coding	-	-	2	86	0	0	0.5	114.1	1	-4,-7	-	-	5.802	MINOR
ENSMUSG00000023861	Mpc1	ENSMUST00000155364	ENSMUSP00000119443	TRANSLATION	protein_coding	-	CCDS49944.1	2	109	0	0	15.5	117.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000023861	Mpc1	ENSMUST00000124023	ENSMUSP00000118386	TRANSLATION	protein_coding	-	-	2	85	0	0	0.5	114.7	1	-4,-7	-	-	5.838	MINOR
ENSMUSG00000023861	Mpc1	ENSMUST00000147427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023861	Mpc1	ENSMUST00000046754	ENSMUSP00000045654	TRANSLATION	protein_coding	-	-	5	109	0	0	15.5	117.4	1	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000023861	Mpc1	ENSMUST00000145402	ENSMUSP00000122214	TRANSLATION	protein_coding	stop	-	3	78	0	0	0	84	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000015468	Notch4	ENSMUST00000141768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015468	Notch4	ENSMUST00000128314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015468	Notch4	ENSMUST00000174707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015468	Notch4	ENSMUST00000151867	ENSMUSP00000134497	TRANSLATION	nonsense_mediated_decay	start	-	5	43	0	0.48	0	28.1	0	1,-2	-	-	-1	MINOR
ENSMUSG00000015468	Notch4	ENSMUST00000015612	ENSMUSP00000015612	TRANSLATION	protein_coding	-	CCDS28647.1	1	1964	88	19.51	1.5	836.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000015468	Notch4	ENSMUST00000173389	ENSMUSP00000133574	TRANSLATION	nonsense_mediated_decay	-	-	1	978	77	13.33	0	536.2	0	4,-1	-	-	-1	MINOR
ENSMUSG00000015468	Notch4	ENSMUST00000156724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015468	Notch4	ENSMUST00000151654	ENSMUSP00000133646	TRANSLATION	nonsense_mediated_decay	start	-	5	43	0	0.48	0	28.1	0	1,-2	-	-	-1	MINOR
ENSMUSG00000015468	Notch4	ENSMUST00000152714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015468	Notch4	ENSMUST00000150441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015468	Notch4	ENSMUST00000126702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015468	Notch4	ENSMUST00000126950	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091259	Vmn2r110	ENSMUST00000233630	ENSMUSP00000156414	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	0.4	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000091259	Vmn2r110	ENSMUST00000232904	ENSMUSP00000156608	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	0.4	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000091259	Vmn2r110	ENSMUST00000169559	ENSMUSP00000129347	TRANSLATION	protein_coding	-	CCDS49988.1	5	858	4	3.96	1.5	388.5	9	-1,-4	-	-	16	PRINCIPAL:1
ENSMUSG00000091259	Vmn2r110	ENSMUST00000233022	ENSMUSP00000156560	TRANSLATION	protein_coding	-	-	-	837	4	3.36	0	351.5	9	-1,-4	-	-	12.58	MINOR
ENSMUSG00000091656	Vmn2r106	ENSMUST00000233061	ENSMUSP00000156586	TRANSLATION	protein_coding	-	-	-	806	0	3.86	0	359.4	8	3,-2	-	-	8.826	MINOR
ENSMUSG00000091656	Vmn2r106	ENSMUST00000233933	ENSMUSP00000156688	TRANSLATION	protein_coding	-	-	-	690	0	4.3	0	354.1	8	3,-2	-	-	9.39	MINOR
ENSMUSG00000091656	Vmn2r106	ENSMUST00000167464	ENSMUSP00000126534	TRANSLATION	protein_coding	-	CCDS49983.1	5	862	0	4.66	1.5	385.6	8	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024151	Msh2	ENSMUST00000024967	ENSMUSP00000024967	TRANSLATION	protein_coding	-	CCDS29019.1	1	935	13	16.33	6.3	633.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024151	Msh2	ENSMUST00000173097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024151	Msh2	ENSMUST00000172596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024151	Msh2	ENSMUST00000174240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024151	Msh2	ENSMUST00000174703	ENSMUSP00000133488	TRANSLATION	nonsense_mediated_decay	start	-	5	68	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024151	Msh2	ENSMUST00000172855	ENSMUSP00000133650	TRANSLATION	protein_coding	start/stop	-	5	210	0	3	0	96.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039316	Rftn1	ENSMUST00000044503	ENSMUSP00000046524	TRANSLATION	protein_coding	-	CCDS28873.1	1	554	0	0	1.5	713.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039316	Rftn1	ENSMUST00000156094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039316	Rftn1	ENSMUST00000113195	ENSMUSP00000108820	TRANSLATION	protein_coding	-	-	1	276	0	0	0	366.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000023083	H2-M10.2	ENSMUST00000023845	ENSMUSP00000023845	TRANSLATION	protein_coding	-	CCDS28720.1	1	329	0	3.72	0.5	222.9	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000034413	Neurl1b	ENSMUST00000053020	ENSMUSP00000051481	TRANSLATION	protein_coding	-	CCDS37513.1	1	546	8	1.62	1.5	298.9	0	-4,-2	-	-	18.192	PRINCIPAL:1
ENSMUSG00000034413	Neurl1b	ENSMUST00000182897	ENSMUSP00000138417	TRANSLATION	protein_coding	-	-	5	364	8	0.82	0	158.2	0	-4,-6	-	-	9.036	MINOR
ENSMUSG00000034413	Neurl1b	ENSMUST00000183077	ENSMUSP00000138178	TRANSLATION	protein_coding	-	-	5	315	8	1.22	3.6	194.7	0	-4,-2	-	-	11.518	MINOR
ENSMUSG00000002763	Pex6	ENSMUST00000002840	ENSMUSP00000002840	TRANSLATION	protein_coding	-	CCDS28837.1	1	981	27	8.09	7.5	214.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000002763	Pex6	ENSMUST00000127897	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002763	Pex6	ENSMUST00000144964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002763	Pex6	ENSMUST00000148872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096910	Zfp955b	ENSMUST00000099414	ENSMUSP00000097011	TRANSLATION	protein_coding	-	CCDS50067.1	1	545	44	1.4	0.5	194	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000096910	Zfp955b	ENSMUST00000234813	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073457	Smok2b	ENSMUST00000059824	ENSMUSP00000061516	TRANSLATION	protein_coding	-	CCDS49952.1	-	484	17	0.6	0.5	244.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000073457	Smok2b	ENSMUST00000162940	ENSMUSP00000124967	TRANSLATION	protein_coding	-	CCDS49952.1	5	484	17	0.6	0.5	244.9	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062012	Zfp13	ENSMUST00000228942	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062012	Zfp13	ENSMUST00000227952	ENSMUSP00000154342	TRANSLATION	protein_coding	stop	-	-	118	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062012	Zfp13	ENSMUST00000115516	ENSMUSP00000111178	TRANSLATION	protein_coding	-	-	1	512	32	0.8	0.5	239.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000062012	Zfp13	ENSMUST00000228298	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062012	Zfp13	ENSMUST00000057029	ENSMUSP00000054595	TRANSLATION	protein_coding	-	CCDS28450.1	1	505	32	0.8	0.5	239.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000023926	Rhag	ENSMUST00000024721	ENSMUSP00000024721	TRANSLATION	protein_coding	-	CCDS28787.1	1	438	5	7.756	0.5	273	17	-1,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000023926	Rhag	ENSMUST00000233619	ENSMUSP00000156765	TRANSLATION	nonsense_mediated_decay	start	-	-	61	0	0.48	0	0	2	-2,-5	-	-	-1	MINOR
ENSMUSG00000023926	Rhag	ENSMUST00000233740	ENSMUSP00000156889	TRANSLATION	protein_coding	-	-	-	396	5	7.104	0.5	260.3	16	-1,-5	-	-	14.936	MINOR
ENSMUSG00000056600	Olfr90	ENSMUST00000217397	ENSMUSP00000150119	TRANSLATION	protein_coding	-	CCDS28735.1	5	310	0	0.72	1.5	175.4	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056600	Olfr90	ENSMUST00000207101	ENSMUSP00000146397	TRANSLATION	protein_coding	stop	-	3	156	0	0.42	0	82.9	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000056600	Olfr90	ENSMUST00000215502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056600	Olfr90	ENSMUST00000070808	ENSMUSP00000065322	TRANSLATION	protein_coding	-	CCDS28735.1	-	310	0	0.72	1.5	175.4	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056600	Olfr90	ENSMUST00000216488	ENSMUSP00000149544	TRANSLATION	protein_coding	-	CCDS28735.1	5	310	0	0.72	1.5	175.4	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056600	Olfr90	ENSMUST00000215195	ENSMUSP00000150769	TRANSLATION	protein_coding	-	CCDS28735.1	5	310	0	0.72	1.5	175.4	8	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040482	Dxo	ENSMUST00000173874	ENSMUSP00000134332	TRANSLATION	protein_coding	stop	-	5	304	5	7.07	0	81	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000174569	ENSMUSP00000133448	TRANSLATION	nonsense_mediated_decay	start	-	5	74	4	1.66	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000173063	ENSMUSP00000134164	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000174684	ENSMUSP00000134653	TRANSLATION	nonsense_mediated_decay	start	-	5	61	1	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000173768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040482	Dxo	ENSMUST00000174092	ENSMUSP00000133587	TRANSLATION	protein_coding	-	-	5	245	0	5.49	0	45.2	0	-4,-5	-	-	3.348	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000180043	ENSMUSP00000137234	TRANSLATION	protein_coding	-	CCDS28660.1	5	397	5	9.4	1.5	81	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000040482	Dxo	ENSMUST00000173644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040482	Dxo	ENSMUST00000046244	ENSMUSP00000047018	TRANSLATION	protein_coding	-	CCDS28660.1	1	397	5	9.4	1.5	81	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000040482	Dxo	ENSMUST00000172612	ENSMUSP00000133376	TRANSLATION	protein_coding	start	-	3	118	4	3.49	0	81	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040482	Dxo	ENSMUST00000173995	ENSMUSP00000134583	TRANSLATION	protein_coding	stop	-	2	144	0	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038545	Cul7	ENSMUST00000144966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038545	Cul7	ENSMUST00000151002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038545	Cul7	ENSMUST00000125949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038545	Cul7	ENSMUST00000145567	ENSMUSP00000116133	TRANSLATION	nonsense_mediated_decay	-	-	1	649	0	2	0	107.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038545	Cul7	ENSMUST00000132790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038545	Cul7	ENSMUST00000043464	ENSMUSP00000049128	TRANSLATION	protein_coding	-	CCDS28833.1	1	1689	3	2	0.5	216.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000038545	Cul7	ENSMUST00000133393	ENSMUSP00000119393	TRANSLATION	nonsense_mediated_decay	start	-	5	577	3	2	0	107.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024165	Jpt2	ENSMUST00000233316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024165	Jpt2	ENSMUST00000232978	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024165	Jpt2	ENSMUST00000233067	ENSMUSP00000156651	TRANSLATION	nonsense_mediated_decay	-	-	-	190	0	0	1.5	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024165	Jpt2	ENSMUST00000024981	ENSMUSP00000024981	TRANSLATION	protein_coding	-	CCDS28504.1	1	190	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000024165	Jpt2	ENSMUST00000233481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048440	Cyp4f16	ENSMUST00000163736	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048440	Cyp4f16	ENSMUST00000169591	ENSMUSP00000131058	TRANSLATION	protein_coding	-	CCDS28619.1	1	524	30	8.526	3.9	439.1	3	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000048440	Cyp4f16	ENSMUST00000165515	ENSMUSP00000126845	TRANSLATION	nonsense_mediated_decay	-	-	1	73	0	0.2	0	0	3	1,-2	-	-	-1	MINOR
ENSMUSG00000048440	Cyp4f16	ENSMUST00000168346	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048440	Cyp4f16	ENSMUST00000169252	ENSMUSP00000128349	TRANSLATION	nonsense_mediated_decay	-	-	3	71	0	0.2	0	0	3	1,-2	-	-	-1	MINOR
ENSMUSG00000048440	Cyp4f16	ENSMUST00000237245	ENSMUSP00000158566	TRANSLATION	nonsense_mediated_decay	-	-	-	71	0	0.2	0	0	3	1,-2	-	-	-1	MINOR
ENSMUSG00000048440	Cyp4f16	ENSMUST00000164628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048440	Cyp4f16	ENSMUST00000168285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048440	Cyp4f16	ENSMUST00000003416	ENSMUSP00000003416	TRANSLATION	protein_coding	-	CCDS28619.1	1	524	30	8.526	3.9	439.1	3	1,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000048440	Cyp4f16	ENSMUST00000170956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042345	Ubash3a	ENSMUST00000236745	ENSMUSP00000158544	TRANSLATION	protein_coding	-	CCDS50054.1	-	624	7	10.6	6.3	78.5	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000042345	Ubash3a	ENSMUST00000236599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042345	Ubash3a	ENSMUST00000173776	ENSMUSP00000134557	TRANSLATION	protein_coding	stop	-	3	116	0	2.1	0	23.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042345	Ubash3a	ENSMUST00000151620	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042345	Ubash3a	ENSMUST00000144772	ENSMUSP00000119279	TRANSLATION	nonsense_mediated_decay	-	-	1	129	0	2.1	0	25.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042345	Ubash3a	ENSMUST00000147686	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042345	Ubash3a	ENSMUST00000237216	ENSMUSP00000158184	TRANSLATION	protein_coding	start	-	-	194	4	5.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042345	Ubash3a	ENSMUST00000235375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042345	Ubash3a	ENSMUST00000048656	ENSMUSP00000045890	TRANSLATION	protein_coding	-	-	1	527	5	7.25	2.9	78.5	0	-4,-6	-	-	11	MINOR
ENSMUSG00000052525	Spdya	ENSMUST00000167641	ENSMUSP00000125912	TRANSLATION	protein_coding	-	CCDS50178.1	5	310	0	0	5.2	199.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000052525	Spdya	ENSMUST00000064420	ENSMUSP00000063214	TRANSLATION	protein_coding	-	-	1	309	0	0	2.7	199.8	0	-4,-7	-	-	6.81	MINOR
ENSMUSG00000052525	Spdya	ENSMUST00000144142	ENSMUSP00000118994	TRANSLATION	protein_coding	-	CCDS50178.1	1	310	0	0	5.2	199.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000052525	Spdya	ENSMUST00000124001	ENSMUSP00000118426	TRANSLATION	protein_coding	-	CCDS50179.1	1	283	0	0	0.5	199.8	0	-4,-7	-	-	6	MINOR
ENSMUSG00000023988	Bysl	ENSMUST00000024783	ENSMUSP00000024783	TRANSLATION	protein_coding	-	CCDS50132.1	1	436	0	0	7.5	469.9	0	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000050747	Trim15	ENSMUST00000025329	ENSMUSP00000025329	TRANSLATION	protein_coding	-	CCDS50102.1	1	290	16	2.638	1.5	57.1	0	-4,0	-	-	18	PRINCIPAL:3
ENSMUSG00000050747	Trim15	ENSMUST00000173639	ENSMUSP00000133638	TRANSLATION	nonsense_mediated_decay	start	-	5	136	0	1.4	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000050747	Trim15	ENSMUST00000174195	ENSMUSP00000133953	TRANSLATION	protein_coding	-	CCDS57079.1	1	292	16	2.638	1.5	57.1	0	-4,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000073414	Mpig6b	ENSMUST00000174190	ENSMUSP00000133377	TRANSLATION	protein_coding	-	CCDS57071.1	1	242	0	0	0.5	373.1	1	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000073414	Mpig6b	ENSMUST00000097337	ENSMUSP00000094950	TRANSLATION	protein_coding	-	CCDS28676.1	1	197	0	0	0.5	278.1	1	3,-1	-	-	0.3	MINOR
ENSMUSG00000037537	H2-M11	ENSMUST00000041964	ENSMUSP00000042522	TRANSLATION	protein_coding	stop	-	1	335	0	3.8	0.5	197.9	0	3,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000061046	Haghl	ENSMUST00000140738	ENSMUSP00000116841	TRANSLATION	protein_coding	-	CCDS70773.1	1	240	10	6.58	0.5	94.2	0	-4,-6	-	-	17.25	MINOR
ENSMUSG00000061046	Haghl	ENSMUST00000145053	ENSMUSP00000114961	TRANSLATION	protein_coding	stop	-	3	113	5	3.23	0	22.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061046	Haghl	ENSMUST00000143248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061046	Haghl	ENSMUST00000150324	ENSMUSP00000119647	TRANSLATION	protein_coding	-	CCDS28527.1	1	283	10	6.58	6.4	106.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000061046	Haghl	ENSMUST00000148986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061046	Haghl	ENSMUST00000138100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061046	Haghl	ENSMUST00000137587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061046	Haghl	ENSMUST00000133071	ENSMUSP00000120885	TRANSLATION	protein_coding	-	CCDS70772.1	1	235	10	5.18	0.5	76.8	0	-4,-6	-	-	13.404	MINOR
ENSMUSG00000061046	Haghl	ENSMUST00000138759	ENSMUSP00000115538	TRANSLATION	protein_coding	-	CCDS70772.1	1	235	10	5.18	0.5	76.8	0	-4,-6	-	-	13.404	MINOR
ENSMUSG00000061046	Haghl	ENSMUST00000129917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061046	Haghl	ENSMUST00000077938	ENSMUSP00000077091	TRANSLATION	protein_coding	-	CCDS28527.1	1	283	10	6.58	6.4	106.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000073399	Trim40	ENSMUST00000172640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073399	Trim40	ENSMUST00000087158	ENSMUSP00000084400	TRANSLATION	protein_coding	-	CCDS28727.1	1	246	13	0.6	1.5	39.7	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000073399	Trim40	ENSMUST00000172711	ENSMUSP00000133581	TRANSLATION	protein_coding	-	CCDS57080.1	1	212	13	0.6	1.5	39.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000073399	Trim40	ENSMUST00000174107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024091	Vapa	ENSMUST00000232686	ENSMUSP00000156845	TRANSLATION	protein_coding	start	-	-	236	0	2.5	0	58.1	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000024091	Vapa	ENSMUST00000024897	ENSMUSP00000024897	TRANSLATION	protein_coding	-	CCDS37677.1	1	249	0	4	11.5	114.1	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024301	Kifc5b	ENSMUST00000078961	ENSMUSP00000077984	TRANSLATION	protein_coding	-	CCDS37517.1	5	672	12	3.9	0.5	314.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024301	Kifc5b	ENSMUST00000235206	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024301	Kifc5b	ENSMUST00000236476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024301	Kifc5b	ENSMUST00000235998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001524	Gtf2h4	ENSMUST00000159671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001524	Gtf2h4	ENSMUST00000160711	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001524	Gtf2h4	ENSMUST00000162604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001524	Gtf2h4	ENSMUST00000159852	ENSMUSP00000124060	TRANSLATION	protein_coding	stop	-	3	61	0	1.5	0	43.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001524	Gtf2h4	ENSMUST00000162266	ENSMUSP00000124103	TRANSLATION	protein_coding	stop	-	3	91	0	2.58	0	71.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001524	Gtf2h4	ENSMUST00000001565	ENSMUSP00000001565	TRANSLATION	protein_coding	-	CCDS28702.1	1	463	0	12.41	8.8	456.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000001524	Gtf2h4	ENSMUST00000160734	ENSMUSP00000124335	TRANSLATION	protein_coding	-	CCDS28702.1	5	463	0	12.41	8.8	456.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000001524	Gtf2h4	ENSMUST00000162927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001524	Gtf2h4	ENSMUST00000160535	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001524	Gtf2h4	ENSMUST00000160752	ENSMUSP00000124458	TRANSLATION	nonsense_mediated_decay	-	-	5	184	0	3.74	0	100.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001524	Gtf2h4	ENSMUST00000162894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001524	Gtf2h4	ENSMUST00000160039	ENSMUSP00000124683	TRANSLATION	protein_coding	stop	-	3	164	0	4.91	0	135.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038762	Abcf1	ENSMUST00000172661	ENSMUSP00000134092	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038762	Abcf1	ENSMUST00000173125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038762	Abcf1	ENSMUST00000087205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038762	Abcf1	ENSMUST00000173111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038762	Abcf1	ENSMUST00000174128	ENSMUSP00000134716	TRANSLATION	protein_coding	stop	-	5	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038762	Abcf1	ENSMUST00000174834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038762	Abcf1	ENSMUST00000043757	ENSMUSP00000036881	TRANSLATION	protein_coding	-	CCDS28713.1	1	837	18	8.174	1.5	156.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038762	Abcf1	ENSMUST00000173090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036214	Znrd1as	ENSMUST00000173814	ENSMUSP00000134016	TRANSLATION	protein_coding	-	-	1	213	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036214	Znrd1as	ENSMUST00000209623	ENSMUSP00000147556	TRANSLATION	protein_coding	-	-	5	362	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036214	Znrd1as	ENSMUST00000172672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036214	Znrd1as	ENSMUST00000040177	ENSMUSP00000048695	TRANSLATION	protein_coding	-	CCDS28731.1	1	292	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000083947	Olfr122	ENSMUST00000217119	ENSMUSP00000149334	TRANSLATION	protein_coding	-	CCDS28764.2	5	321	0	0.42	3.9	194.9	4	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000083947	Olfr122	ENSMUST00000215449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000083947	Olfr122	ENSMUST00000172582	ENSMUSP00000134283	TRANSLATION	protein_coding	-	CCDS28764.2	2	321	0	0.42	3.9	194.9	4	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000083947	Olfr122	ENSMUST00000119082	ENSMUSP00000113170	TRANSLATION	protein_coding	-	-	-	330	0	0.42	0.5	194.9	4	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000092277	Gm19684	ENSMUST00000173128	ENSMUSP00000134339	TRANSLATION	protein_coding	-	-	1	117	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000073406	H2-Bl	ENSMUST00000192532	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000073406	H2-Bl	ENSMUST00000194244	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000073406	H2-Bl	ENSMUST00000184502	ENSMUSP00000139275	TRANSLATION	protein_coding	-	-	1	257	0	6.13	0	282.9	1	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073406	H2-Bl	ENSMUST00000185167	ENSMUSP00000139373	TRANSLATION	nonsense_mediated_decay	-	-	1	57	0	0.75	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000073406	H2-Bl	ENSMUST00000183560	ENSMUSP00000138812	TRANSLATION	protein_coding	-	-	1	75	0	2.05	0	0	1	4,-1	-	-	0	MINOR
ENSMUSG00000073406	H2-Bl	ENSMUST00000185087	ENSMUSP00000139166	TRANSLATION	nonsense_mediated_decay	-	-	1	114	0	3.08	0	139.5	0	3,-1	-	-	-1	MINOR
ENSMUSG00000073406	H2-Bl	ENSMUST00000195838	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000073406	H2-Bl	ENSMUST00000195833	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000073406	H2-Bl	ENSMUST00000183999	ENSMUSP00000139165	TRANSLATION	protein_coding	-	-	1	89	0	2.2	0	0	1	4,-1	-	-	0	MINOR
ENSMUSG00000073406	H2-Bl	ENSMUST00000184850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073406	H2-Bl	ENSMUST00000173080	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000023932	Cdc5l	ENSMUST00000024727	ENSMUSP00000024727	TRANSLATION	protein_coding	-	CCDS37627.1	1	802	0	15.25	15	353.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000023932	Cdc5l	ENSMUST00000232910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023932	Cdc5l	ENSMUST00000232900	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067424	Zfp563	ENSMUST00000153072	ENSMUSP00000119142	TRANSLATION	protein_coding	start/stop	-	2	138	0	1	0	77.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000067424	Zfp563	ENSMUST00000140829	ENSMUSP00000121678	TRANSLATION	protein_coding	stop	-	2	208	9	2.4	0	102.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067424	Zfp563	ENSMUST00000131722	ENSMUSP00000118809	TRANSLATION	protein_coding	-	CCDS50063.1	2	448	43	3	1.5	269.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095603	Olfr106-ps	ENSMUST00000214704	ENSMUSP00000154161	TRANSLATION	protein_coding	-	-	5	322	0	0.42	1	183.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095603	Olfr106-ps	ENSMUST00000209002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037805	Rpl10a	ENSMUST00000232770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000141049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000233014	ENSMUSP00000156409	TRANSLATION	nonsense_mediated_decay	-	-	-	54	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037805	Rpl10a	ENSMUST00000233842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037805	Rpl10a	ENSMUST00000129935	ENSMUSP00000114141	TRANSLATION	nonsense_mediated_decay	-	-	3	58	0	1.2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037805	Rpl10a	ENSMUST00000150103	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000233895	ENSMUSP00000156823	TRANSLATION	protein_coding	-	-	-	118	0	2.2	0	37.6	0	-4,-7	-	-	0	MINOR
ENSMUSG00000037805	Rpl10a	ENSMUST00000233427	ENSMUSP00000156947	TRANSLATION	protein_coding	-	-	-	216	0	5.7	19.5	149.4	0	-4,-7	-	-	16	ALTERNATIVE:1
ENSMUSG00000037805	Rpl10a	ENSMUST00000143443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000233852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000232920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037805	Rpl10a	ENSMUST00000128758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000232867	ENSMUSP00000156828	TRANSLATION	protein_coding	stop	-	-	164	0	4.03	0	35.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037805	Rpl10a	ENSMUST00000152665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037805	Rpl10a	ENSMUST00000042334	ENSMUSP00000048469	TRANSLATION	protein_coding	-	CCDS28576.1	1	217	0	5.7	19.5	149.4	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000037805	Rpl10a	ENSMUST00000233937	ENSMUSP00000156950	TRANSLATION	protein_coding	-	-	-	190	0	4.95	0	127	0	-4,-6	-	-	9.156	MINOR
ENSMUSG00000093533	Vmn2r127	ENSMUST00000177481	ENSMUSP00000157256	TRANSLATION	polymorphic_pseudogene	-	-	-	296	0	1.44	0	101.6	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000000127	Fer	ENSMUST00000038080	ENSMUSP00000037418	TRANSLATION	protein_coding	-	CCDS28937.1	1	453	18	8.4	1.5	410.4	0	-4,-5	-	-	9.759	MINOR
ENSMUSG00000000127	Fer	ENSMUST00000000129	ENSMUSP00000000129	TRANSLATION	protein_coding	-	CCDS28936.1	1	823	18	15.7	7.5	451.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000000127	Fer	ENSMUST00000233190	ENSMUSP00000156523	TRANSLATION	protein_coding	-	-	-	765	18	14.7	0.5	438.2	0	-4,-5	-	-	15.198	MINOR
ENSMUSG00000000127	Fer	ENSMUST00000233225	ENSMUSP00000156905	TRANSLATION	protein_coding	stop	-	-	160	0	3.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000127	Fer	ENSMUST00000232945	ENSMUSP00000156416	TRANSLATION	protein_coding	-	-	-	645	11	11.7	0	194	0	-4,-5	-	-	1.332	MINOR
ENSMUSG00000096433	Zfp994	ENSMUST00000179996	ENSMUSP00000136105	TRANSLATION	protein_coding	-	CCDS57054.1	5	661	68	1.4	1.5	408.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094884	Olfr105-ps	ENSMUST00000215518	ENSMUSP00000154753	TRANSLATION	protein_coding	-	-	5	305	0	0.42	0	174.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094884	Olfr105-ps	ENSMUST00000214591	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117098	Gm49909	ENSMUST00000233417	ENSMUSP00000156594	TRANSLATION	protein_coding,RT	-	-	-	172	3	3	21.5	49.1	0	-4,-2	-	-	-1	ALTERNATIVE:1
ENSMUSG00000117098	Gm49909	ENSMUST00000233357	ENSMUSP00000156883	TRANSLATION	protein_coding,RT	-	CCDS28954.1	-	172	3	3	21.5	72	0	-4,-7	-	-	-1	PRINCIPAL:2
ENSMUSG00000071036	Gm10309	ENSMUST00000095186	ENSMUSP00000092809	TRANSLATION	protein_coding	-	-	1	119	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000054142	Vmn1r236	ENSMUST00000235320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054142	Vmn1r236	ENSMUST00000235527	ENSMUSP00000158530	TRANSLATION	protein_coding	-	-	-	304	0	0	0	104.8	8	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000054142	Vmn1r236	ENSMUST00000236535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054142	Vmn1r236	ENSMUST00000066998	ENSMUSP00000064103	TRANSLATION	protein_coding	-	CCDS28437.1	-	334	0	0	0.5	104.8	8	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000054142	Vmn1r236	ENSMUST00000236545	ENSMUSP00000158319	TRANSLATION	protein_coding	-	-	-	304	0	0	0	104.8	8	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045316	Fahd1	ENSMUST00000049642	ENSMUSP00000055827	TRANSLATION	protein_coding	-	CCDS37496.1	-	227	9	1	0.5	210.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000048231	H2-M10.4	ENSMUST00000057502	ENSMUSP00000058686	TRANSLATION	protein_coding	-	CCDS28723.1	1	331	0	3.56	0.5	205.2	1	0,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000048231	H2-M10.4	ENSMUST00000169950	ENSMUSP00000130832	TRANSLATION	protein_coding	-	CCDS28723.1	1	331	0	3.56	0.5	205.2	1	0,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024037	Wdr4	ENSMUST00000167419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024037	Wdr4	ENSMUST00000166626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024037	Wdr4	ENSMUST00000169224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024037	Wdr4	ENSMUST00000172284	ENSMUSP00000129736	TRANSLATION	nonsense_mediated_decay	start	-	1	102	0	1.2	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000237127	ENSMUSP00000158546	TRANSLATION	protein_coding	start/stop	-	-	120	0	2.1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000236913	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024037	Wdr4	ENSMUST00000170176	ENSMUSP00000127073	TRANSLATION	nonsense_mediated_decay	start	-	1	107	0	1.5	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000237807	ENSMUSP00000157734	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000171291	ENSMUSP00000132290	TRANSLATION	protein_coding	stop	-	3	46	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000166992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024037	Wdr4	ENSMUST00000171592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024037	Wdr4	ENSMUST00000171171	ENSMUSP00000126061	TRANSLATION	protein_coding	-	CCDS28606.2	1	456	0	4.745	1.5	13.6	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000024037	Wdr4	ENSMUST00000236665	ENSMUSP00000157778	TRANSLATION	protein_coding	start	-	-	426	0	4.745	0	13.6	0	-3,0	-	-	-1	MINOR
ENSMUSG00000024037	Wdr4	ENSMUST00000169454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090556	Olfr753-ps1	ENSMUST00000174025	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000090556	Olfr753-ps1	ENSMUST00000208970	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000090556	Olfr753-ps1	ENSMUST00000219487	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000090556	Olfr753-ps1	ENSMUST00000174673	ENSMUSP00000146480	TRANSLATION	protein_coding	stop	-	-	164	0	0	0	97.7	0	-3,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000024170	Telo2	ENSMUST00000115181	ENSMUSP00000110835	TRANSLATION	protein_coding	-	CCDS28507.1	1	840	0	0	0.5	119.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024170	Telo2	ENSMUST00000024987	ENSMUSP00000024987	TRANSLATION	protein_coding	-	CCDS28507.1	1	840	0	0	0.5	119.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024170	Telo2	ENSMUST00000146522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024170	Telo2	ENSMUST00000156698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024170	Telo2	ENSMUST00000143390	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024170	Telo2	ENSMUST00000130525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024170	Telo2	ENSMUST00000152460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024170	Telo2	ENSMUST00000155632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024170	Telo2	ENSMUST00000139196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024170	Telo2	ENSMUST00000155607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024170	Telo2	ENSMUST00000151205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041881	Ndufa7	ENSMUST00000173807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041881	Ndufa7	ENSMUST00000173175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041881	Ndufa7	ENSMUST00000173946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041881	Ndufa7	ENSMUST00000173182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041881	Ndufa7	ENSMUST00000234470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041881	Ndufa7	ENSMUST00000174847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041881	Ndufa7	ENSMUST00000174498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041881	Ndufa7	ENSMUST00000173556	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041881	Ndufa7	ENSMUST00000048249	ENSMUSP00000039692	TRANSLATION	protein_coding	-	CCDS28631.1	1	113	0	3.25	6.3	125.6	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000041881	Ndufa7	ENSMUST00000173132	ENSMUSP00000133882	TRANSLATION	nonsense_mediated_decay	-	-	2	40	0	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002835	Chaf1a	ENSMUST00000233325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002835	Chaf1a	ENSMUST00000232828	ENSMUSP00000156798	TRANSLATION	protein_coding	start	-	-	226	0	0	0	166.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002835	Chaf1a	ENSMUST00000002914	ENSMUSP00000002914	TRANSLATION	protein_coding	-	CCDS28892.1	1	911	0	0	0.5	861.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000039770	Ypel5	ENSMUST00000233221	ENSMUSP00000156569	TRANSLATION	protein_coding	stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039770	Ypel5	ENSMUST00000233210	ENSMUSP00000156501	TRANSLATION	protein_coding	-	CCDS28963.1	-	121	4	0	21.5	53.2	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039770	Ypel5	ENSMUST00000233662	ENSMUSP00000156759	TRANSLATION	protein_coding	stop	-	-	27	2	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039770	Ypel5	ENSMUST00000045174	ENSMUSP00000037764	TRANSLATION	protein_coding	-	CCDS28963.1	1	121	4	0	21.5	53.2	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000039770	Ypel5	ENSMUST00000233886	ENSMUSP00000156450	TRANSLATION	protein_coding	-	CCDS28963.1	-	121	4	0	21.5	53.2	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000063383	Zfp947	ENSMUST00000080249	ENSMUSP00000079137	TRANSLATION	protein_coding	-	CCDS49999.1	1	437	36	1.6	0.5	262.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000059562	Ccdc154	ENSMUST00000182292	ENSMUSP00000138191	TRANSLATION	protein_coding	-	-	5	662	0	0	0.5	836.6	0	-4,-5	-	-	4.404	MINOR
ENSMUSG00000059562	Ccdc154	ENSMUST00000182621	ENSMUSP00000138090	TRANSLATION	protein_coding	-	CCDS50032.2	5	664	0	0	0.5	841.7	0	-4,-5	-	-	4.71	MINOR
ENSMUSG00000059562	Ccdc154	ENSMUST00000183178	ENSMUSP00000138659	TRANSLATION	nonsense_mediated_decay	-	-	1	82	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059562	Ccdc154	ENSMUST00000073277	ENSMUSP00000073002	TRANSLATION	protein_coding	-	-	5	657	0	0	0	863.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045409	Trim39	ENSMUST00000173665	ENSMUSP00000133529	TRANSLATION	nonsense_mediated_decay	start	-	1	60	9	1	0	36.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045409	Trim39	ENSMUST00000173369	ENSMUSP00000133298	TRANSLATION	protein_coding	-	-	1	496	17	5.262	0.5	239.1	0	-4,-5	-	-	18	MINOR
ENSMUSG00000045409	Trim39	ENSMUST00000042717	ENSMUSP00000039790	TRANSLATION	protein_coding	-	CCDS37611.1	1	488	17	4.998	7.5	239.1	0	-4,-5	-	-	20.472	PRINCIPAL:1
ENSMUSG00000045409	Trim39	ENSMUST00000113704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045409	Trim39	ENSMUST00000172832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045409	Trim39	ENSMUST00000174197	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045409	Trim39	ENSMUST00000113706	ENSMUSP00000109336	TRANSLATION	protein_coding	-	CCDS37611.1	1	488	17	4.998	7.5	239.1	0	-4,-5	-	-	20.472	PRINCIPAL:1
ENSMUSG00000058704	Memo1	ENSMUST00000233514	ENSMUSP00000156607	TRANSLATION	protein_coding	-	CCDS28969.1	-	297	0	8.33	15.1	271.3	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000058704	Memo1	ENSMUST00000232989	ENSMUSP00000156437	TRANSLATION	protein_coding	-	-	-	222	0	6.25	0	185	0	-4,-7	-	-	2.664	MINOR
ENSMUSG00000058704	Memo1	ENSMUST00000232861	-	NO_TRANSLATION	TEC
ENSMUSG00000058704	Memo1	ENSMUST00000233422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058704	Memo1	ENSMUST00000233214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058704	Memo1	ENSMUST00000078459	ENSMUSP00000077553	TRANSLATION	protein_coding	-	-	1	289	1	7.58	0	249.4	0	-4,-7	-	-	9.186	MINOR
ENSMUSG00000058704	Memo1	ENSMUST00000233495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058704	Memo1	ENSMUST00000232987	ENSMUSP00000156956	TRANSLATION	nonsense_mediated_decay	-	-	-	206	0	5.49	0	192.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058704	Memo1	ENSMUST00000233176	ENSMUSP00000156929	TRANSLATION	nonsense_mediated_decay	-	-	-	81	0	2.316	0	55.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058704	Memo1	ENSMUST00000233144	ENSMUSP00000156440	TRANSLATION	protein_coding	stop	-	-	107	0	3.25	0	98.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053390	Zfp952	ENSMUST00000087666	ENSMUSP00000084949	TRANSLATION	protein_coding	-	CCDS37559.1	1	504	36	2.25	0.5	236.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053390	Zfp952	ENSMUST00000141815	ENSMUSP00000157376	TRANSLATION	protein_coding	-	-	1	179	0	1.65	0	77.2	0	-4,-5	-	-	4.398	MINOR
ENSMUSG00000053390	Zfp952	ENSMUST00000157017	ENSMUSP00000123066	TRANSLATION	protein_coding	stop	-	3	141	0	0.65	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053390	Zfp952	ENSMUST00000129057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002076	Hsf2bp	ENSMUST00000236321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002076	Hsf2bp	ENSMUST00000002145	ENSMUSP00000002145	TRANSLATION	protein_coding	-	CCDS50056.1	1	338	0	0	2.8	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000002076	Hsf2bp	ENSMUST00000238192	ENSMUSP00000157466	TRANSLATION	protein_coding	-	CCDS50056.1	-	338	0	0	2.8	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000002076	Hsf2bp	ENSMUST00000133308	ENSMUSP00000115909	TRANSLATION	protein_coding	-	-	3	263	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000002076	Hsf2bp	ENSMUST00000138172	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002076	Hsf2bp	ENSMUST00000237527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038045	Sult6b1	ENSMUST00000042683	ENSMUSP00000038282	TRANSLATION	protein_coding	-	-	5	265	19	5.4	2.4	187.8	0	-4,-5	-	-	17.868	MINOR
ENSMUSG00000038045	Sult6b1	ENSMUST00000159710	ENSMUSP00000124309	TRANSLATION	nonsense_mediated_decay	-	-	5	36	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038045	Sult6b1	ENSMUST00000169544	ENSMUSP00000132823	TRANSLATION	protein_coding	-	CCDS50182.1	5	303	19	5.8	5.2	187.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000038045	Sult6b1	ENSMUST00000146474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024127	Prepl	ENSMUST00000234994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024127	Prepl	ENSMUST00000171795	ENSMUSP00000130967	TRANSLATION	protein_coding	-	CCDS50202.1	1	725	0	6.255	0.5	208.8	0	-4,-2	-	-	11.976	MINOR
ENSMUSG00000024127	Prepl	ENSMUST00000072406	ENSMUSP00000072239	TRANSLATION	protein_coding	-	CCDS29005.1	1	638	0	6.255	7.5	209.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024127	Prepl	ENSMUST00000234036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024127	Prepl	ENSMUST00000234393	ENSMUSP00000157235	TRANSLATION	protein_coding	stop	-	-	141	0	0.545	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024127	Prepl	ENSMUST00000234676	ENSMUSP00000157296	TRANSLATION	protein_coding	stop	-	-	162	0	0.545	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053347	Zfp943	ENSMUST00000055349	ENSMUSP00000059554	TRANSLATION	protein_coding	-	CCDS49997.1	1	507	47	1.6	0.5	323.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053347	Zfp943	ENSMUST00000153985	ENSMUSP00000115817	TRANSLATION	protein_coding	-	-	1	73	0	1	0	83.8	0	-4,-6	-	-	3.75	MINOR
ENSMUSG00000053347	Zfp943	ENSMUST00000174015	ENSMUSP00000133735	TRANSLATION	nonsense_mediated_decay	-	-	1	60	0	1	0	83.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062629	Olfr114	ENSMUST00000076914	ENSMUSP00000076181	TRANSLATION	protein_coding	-	CCDS28757.1	-	312	0	0.36	1.5	147.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062629	Olfr114	ENSMUST00000216249	ENSMUSP00000149735	TRANSLATION	protein_coding	-	CCDS28757.1	5	312	0	0.36	1.5	147.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062629	Olfr114	ENSMUST00000214871	ENSMUSP00000151201	TRANSLATION	protein_coding	-	CCDS28757.1	5	312	0	0.36	1.5	147.2	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052142	Rasal3	ENSMUST00000136375	ENSMUSP00000118738	TRANSLATION	nonsense_mediated_decay	-	-	2	601	0	2.4	0	29.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052142	Rasal3	ENSMUST00000142203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052142	Rasal3	ENSMUST00000143808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052142	Rasal3	ENSMUST00000063824	ENSMUSP00000064084	TRANSLATION	protein_coding	-	CCDS37556.1	1	1041	0	6	0.5	71.4	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000052142	Rasal3	ENSMUST00000135618	ENSMUSP00000116107	TRANSLATION	protein_coding	-	-	5	1019	0	6	0.5	71.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000052142	Rasal3	ENSMUST00000135968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052142	Rasal3	ENSMUST00000137458	ENSMUSP00000123141	TRANSLATION	protein_coding	-	CCDS84292.1	1	1043	0	6	0.5	71.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000052142	Rasal3	ENSMUST00000141714	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052142	Rasal3	ENSMUST00000135560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052142	Rasal3	ENSMUST00000134723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041565	L3mbtl4	ENSMUST00000124543	ENSMUSP00000121045	TRANSLATION	protein_coding	stop	-	5	481	0	10.03	0	342.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041565	L3mbtl4	ENSMUST00000233696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041565	L3mbtl4	ENSMUST00000093007	ENSMUSP00000094892	TRANSLATION	protein_coding	-	-	5	621	0	11.43	0.5	400	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000041565	L3mbtl4	ENSMUST00000233625	ENSMUSP00000156542	TRANSLATION	protein_coding	start	-	-	131	0	1.4	0	57.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041565	L3mbtl4	ENSMUST00000150573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041565	L3mbtl4	ENSMUST00000139383	ENSMUSP00000117626	TRANSLATION	nonsense_mediated_decay	-	-	1	292	0	5.95	0	192.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024095	Hnrnpll	ENSMUST00000183516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024095	Hnrnpll	ENSMUST00000184297	ENSMUSP00000139075	TRANSLATION	nonsense_mediated_decay	-	-	5	331	0	4.5	0	53.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024095	Hnrnpll	ENSMUST00000184578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024095	Hnrnpll	ENSMUST00000061331	ENSMUSP00000058308	TRANSLATION	protein_coding	-	-	5	591	0	9.28	0.5	236.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024095	Hnrnpll	ENSMUST00000184726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024095	Hnrnpll	ENSMUST00000184889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024095	Hnrnpll	ENSMUST00000184635	ENSMUSP00000139372	TRANSLATION	protein_coding	-	CCDS70845.1	1	591	0	9.28	0.5	236.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024077	Strn	ENSMUST00000145480	ENSMUSP00000117663	TRANSLATION	protein_coding	start/stop	-	3	267	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024077	Strn	ENSMUST00000145910	ENSMUSP00000120830	TRANSLATION	protein_coding	-	CCDS28978.1	1	780	0	5.96	6.3	283.4	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024077	Strn	ENSMUST00000024881	ENSMUSP00000024881	TRANSLATION	protein_coding	-	-	1	627	0	4.76	0	118	0	-4,-7	-	-	3.6	MINOR
ENSMUSG00000003198	Zfp959	ENSMUST00000224379	ENSMUSP00000153698	TRANSLATION	protein_coding	stop	-	-	230	6	1.93	0	75.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003198	Zfp959	ENSMUST00000054780	ENSMUSP00000053979	TRANSLATION	protein_coding	-	CCDS37657.1	1	539	42	2.25	0.5	219.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000003198	Zfp959	ENSMUST00000224294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057417	Dcpp3	ENSMUST00000234395	ENSMUSP00000156985	TRANSLATION	protein_coding	-	CCDS37480.1	-	170	0	1.2	0.5	27.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000057417	Dcpp3	ENSMUST00000115428	ENSMUSP00000111088	TRANSLATION	protein_coding	-	CCDS37480.1	2	170	0	1.2	0.5	27.7	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000067049	Unc93a	ENSMUST00000084966	ENSMUSP00000082032	TRANSLATION	protein_coding	-	CCDS28402.1	1	458	0	0	1.5	47.6	10	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000067049	Unc93a	ENSMUST00000232960	ENSMUSP00000156970	TRANSLATION	protein_coding	-	CCDS28402.1	-	458	0	0	1.5	47.6	10	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000067049	Unc93a	ENSMUST00000233405	ENSMUSP00000156756	TRANSLATION	protein_coding	-	CCDS28402.1	-	458	0	0	1.5	47.6	10	-1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000034039	Prss29	ENSMUST00000024993	ENSMUSP00000024993	TRANSLATION	protein_coding	-	CCDS28516.1	1	279	5	3.81	1.5	221.2	0	3,-2	-	-	16.568	PRINCIPAL:2
ENSMUSG00000034039	Prss29	ENSMUST00000234609	ENSMUSP00000156980	TRANSLATION	protein_coding	-	-	-	278	5	4.01	1.5	221.7	0	3,-2	-	-	17	ALTERNATIVE:2
ENSMUSG00000024137	E4f1	ENSMUST00000056032	ENSMUSP00000062344	TRANSLATION	protein_coding	-	CCDS28481.1	1	782	37	5.464	1.5	132.7	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000024137	E4f1	ENSMUST00000228882	ENSMUSP00000154438	TRANSLATION	protein_coding	start	-	-	675	31	4.464	0	111.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024137	E4f1	ENSMUST00000226743	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024137	E4f1	ENSMUST00000226754	ENSMUSP00000153746	TRANSLATION	nonsense_mediated_decay	-	-	-	586	18	3.2	0	73.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024137	E4f1	ENSMUST00000227293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024137	E4f1	ENSMUST00000227241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024137	E4f1	ENSMUST00000226941	ENSMUSP00000154444	TRANSLATION	protein_coding	-	-	-	684	37	5.464	0	132.7	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000024137	E4f1	ENSMUST00000226654	ENSMUSP00000154556	TRANSLATION	nonsense_mediated_decay	-	-	-	427	15	3.2	0	76.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058030	Vmn1r237	ENSMUST00000237155	ENSMUSP00000158294	TRANSLATION	protein_coding	-	CCDS28438.1	-	289	0	0	1.5	113.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058030	Vmn1r237	ENSMUST00000077301	ENSMUSP00000076531	TRANSLATION	protein_coding	-	CCDS28438.1	-	289	0	0	1.5	113.4	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000058030	Vmn1r237	ENSMUST00000237711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033278	Ptprm	ENSMUST00000225074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033278	Ptprm	ENSMUST00000223982	ENSMUSP00000153662	TRANSLATION	protein_coding	-	CCDS28948.1	-	1452	17	27.24	6.6	718.7	1	2,-3	-	-	20	PRINCIPAL:2
ENSMUSG00000033278	Ptprm	ENSMUST00000224862	ENSMUSP00000153179	TRANSLATION	protein_coding	stop	-	-	160	0	2.75	0	34.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033278	Ptprm	ENSMUST00000224091	ENSMUSP00000153463	TRANSLATION	protein_coding	-	-	-	990	1	16.45	0	224.2	1	2,-3	-	-	0	MINOR
ENSMUSG00000033278	Ptprm	ENSMUST00000037974	ENSMUSP00000045603	TRANSLATION	protein_coding	-	-	1	1486	17	26.865	6.4	718.7	1	2,-3	-	-	19.178	ALTERNATIVE:1
ENSMUSG00000033278	Ptprm	ENSMUST00000225688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033278	Ptprm	ENSMUST00000225554	ENSMUSP00000153042	TRANSLATION	nonsense_mediated_decay	start	-	-	77	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000055839	Elob	ENSMUST00000233519	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055839	Elob	ENSMUST00000233796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055839	Elob	ENSMUST00000069579	ENSMUSP00000066210	TRANSLATION	protein_coding	-	CCDS57055.1	1	118	0	3	13.9	31.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000055839	Elob	ENSMUST00000233483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055839	Elob	ENSMUST00000232702	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055839	Elob	ENSMUST00000233857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055839	Elob	ENSMUST00000233593	ENSMUSP00000156963	TRANSLATION	nonsense_mediated_decay	-	-	-	90	0	2	0	31.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055839	Elob	ENSMUST00000233882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002767	Mrpl2	ENSMUST00000002844	ENSMUSP00000002844	TRANSLATION	protein_coding	-	CCDS37638.1	1	306	0	7.25	2.7	198	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000002767	Mrpl2	ENSMUST00000113430	ENSMUSP00000109057	TRANSLATION	protein_coding	-	-	5	304	0	7.25	2.7	198	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000002767	Mrpl2	ENSMUST00000156464	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002767	Mrpl2	ENSMUST00000146183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002767	Mrpl2	ENSMUST00000113429	ENSMUSP00000109056	TRANSLATION	protein_coding	-	-	1	247	0	4	0	99.5	0	1,-3	-	-	0.09	MINOR
ENSMUSG00000045257	Morn2	ENSMUST00000227729	ENSMUSP00000154623	TRANSLATION	protein_coding	-	-	-	152	0	1.4	0	63	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000045257	Morn2	ENSMUST00000061703	ENSMUSP00000051408	TRANSLATION	protein_coding	-	CCDS37703.1	1	79	0	0.8	8.8	44.6	0	-4,-5	-	-	10.674	MINOR
ENSMUSG00000062691	Cebpzos	ENSMUST00000063817	ENSMUSP00000068772	TRANSLATION	protein_coding	-	CCDS50183.1	2	80	0	0	7.6	0	1	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000062691	Cebpzos	ENSMUST00000180077	ENSMUSP00000136411	TRANSLATION	protein_coding	-	CCDS50183.1	1	80	0	0	7.6	0	1	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000062691	Cebpzos	ENSMUST00000192288	ENSMUSP00000141923	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057863	Rpl36	ENSMUST00000080492	ENSMUSP00000079340	TRANSLATION	protein_coding	-	CCDS37665.1	1	105	0	0	7.6	175.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000050762	Prss27	ENSMUST00000059482	ENSMUSP00000056483	TRANSLATION	protein_coding	-	CCDS28472.1	1	328	6	4.078	0.5	226.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000079657	Rab26	ENSMUST00000035797	ENSMUSP00000046089	TRANSLATION	protein_coding	-	CCDS50016.1	1	260	22	5.55	4.1	200.1	0	-4,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000079657	Rab26	ENSMUST00000177441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079657	Rab26	ENSMUST00000176533	ENSMUSP00000135775	TRANSLATION	protein_coding	-	-	5	295	22	5.55	0	200.1	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000079657	Rab26	ENSMUST00000176025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079657	Rab26	ENSMUST00000061764	ENSMUSP00000055970	TRANSLATION	protein_coding	-	-	2	197	19	2.65	0	89.4	0	-4,-2	-	-	4.2	MINOR
ENSMUSG00000079698	Vmn2r93	ENSMUST00000231938	ENSMUSP00000155900	TRANSLATION	protein_coding	-	-	-	585	2	2.76	0	192.8	0	4,-1	-	-	7.04	MINOR
ENSMUSG00000079698	Vmn2r93	ENSMUST00000231879	ENSMUSP00000156230	TRANSLATION	protein_coding	-	-	-	525	0	1.76	0	137.8	0	4,-1	-	-	3.042	MINOR
ENSMUSG00000079698	Vmn2r93	ENSMUST00000079206	ENSMUSP00000078200	TRANSLATION	protein_coding	-	CCDS49972.1	5	857	4	3.24	1.5	391.4	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000079333	Gm11096	ENSMUST00000168858	ENSMUSP00000126744	TRANSLATION	protein_coding	start/stop	-	5	15	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000078546	Zfp995	ENSMUST00000189719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078546	Zfp995	ENSMUST00000185948	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078546	Zfp995	ENSMUST00000106026	ENSMUSP00000101647	TRANSLATION	protein_coding	-	CCDS57051.1	1	437	36	1.6	0.5	262.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078546	Zfp995	ENSMUST00000190066	ENSMUSP00000139581	TRANSLATION	protein_coding	-	CCDS57051.1	2	437	36	1.6	0.5	262.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000078546	Zfp995	ENSMUST00000186313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007029	Vars	ENSMUST00000174260	ENSMUSP00000134313	TRANSLATION	protein_coding	stop	-	2	230	0	2.2	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007029	Vars	ENSMUST00000174084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000173336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000087315	ENSMUSP00000084572	TRANSLATION	protein_coding	-	CCDS37593.1	1	1263	6	19.325	1.5	828.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000007029	Vars	ENSMUST00000173302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000172999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000173584	ENSMUSP00000133994	TRANSLATION	protein_coding	stop	-	1	1278	6	19.175	0	828.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007029	Vars	ENSMUST00000173142	ENSMUSP00000134669	TRANSLATION	protein_coding	start/stop	-	3	130	0	1.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007029	Vars	ENSMUST00000172656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000172741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000173911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000172637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007029	Vars	ENSMUST00000172570	ENSMUSP00000134245	TRANSLATION	protein_coding	stop	-	2	125	0	1.866	0	49.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000059964	Olfr119	ENSMUST00000213732	ENSMUSP00000150099	TRANSLATION	protein_coding	-	CCDS28761.1	5	321	0	0.36	3.9	198.3	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000059964	Olfr119	ENSMUST00000080483	ENSMUSP00000092919	TRANSLATION	protein_coding	-	CCDS28761.1	1	321	0	0.36	3.9	198.3	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000091206	Vmn2r91	ENSMUST00000172359	ENSMUSP00000127465	TRANSLATION	protein_coding	-	CCDS49969.1	5	856	0	3.1	0.5	395.2	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000109739	Gm17949	ENSMUST00000210548	ENSMUSP00000147681	TRANSLATION	protein_coding	-	-	5	212	8	3.75	2.3	142.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095540	Esp4	ENSMUST00000178498	ENSMUSP00000136092	TRANSLATION	protein_coding	-	CCDS57093.1	1	117	0	0.6	0.5	125.5	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024210	Ip6k3	ENSMUST00000025046	ENSMUSP00000025046	TRANSLATION	protein_coding	-	CCDS28562.1	1	396	12	1.3	0.5	220.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024073	Birc6	ENSMUST00000180037	ENSMUSP00000136329	TRANSLATION	protein_coding	-	CCDS37693.2	1	4873	4	8.24	0.5	395.2	0	-4,-7	-	-	16	PRINCIPAL:2
ENSMUSG00000024073	Birc6	ENSMUST00000183224	ENSMUSP00000138270	TRANSLATION	protein_coding	-	-	5	4853	4	8.24	0	395.2	0	-2,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000024073	Birc6	ENSMUST00000182944	ENSMUSP00000138732	TRANSLATION	protein_coding	-	-	5	4869	4	8.24	1	395.2	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000024073	Birc6	ENSMUST00000182845	ENSMUSP00000138717	TRANSLATION	protein_coding	start/stop	-	1	437	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000177957	ENSMUSP00000137114	TRANSLATION	protein_coding	start/stop	-	1	973	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000183249	ENSMUSP00000138521	TRANSLATION	nonsense_mediated_decay	start	-	5	597	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000182382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182133	ENSMUSP00000138693	TRANSLATION	protein_coding	-	-	5	4867	4	8.24	0	395.2	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000024073	Birc6	ENSMUST00000182164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000183010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024073	Birc6	ENSMUST00000182323	ENSMUSP00000138672	TRANSLATION	protein_coding	start	-	5	112	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000182108	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182278	ENSMUSP00000138343	TRANSLATION	protein_coding	start/stop	-	5	343	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000182157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000234521	ENSMUSP00000157257	TRANSLATION	protein_coding	start/stop	-	-	255	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000182631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182817	ENSMUSP00000138349	TRANSLATION	nonsense_mediated_decay	start	-	3	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024073	Birc6	ENSMUST00000182257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024073	Birc6	ENSMUST00000182597	ENSMUSP00000138333	TRANSLATION	protein_coding	-	-	1	4882	4	8.24	0	395.2	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000094921	Vmn2r112	ENSMUST00000234464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094921	Vmn2r112	ENSMUST00000097381	ENSMUSP00000094994	TRANSLATION	protein_coding	-	CCDS50003.1	1	857	4	4.19	1.5	382.6	7	2,-3	-	-	16	PRINCIPAL:2
ENSMUSG00000094921	Vmn2r112	ENSMUST00000234826	ENSMUSP00000157166	TRANSLATION	nonsense_mediated_decay	-	-	-	465	0	1.44	0	117.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000094921	Vmn2r112	ENSMUST00000234882	ENSMUSP00000157078	TRANSLATION	protein_coding	-	-	-	841	4	3.79	0	382.6	7	2,-3	-	-	15.202	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000112304	ENSMUSP00000107923	TRANSLATION	protein_coding	-	CCDS37710.1	1	390	13	3.5	1.5	391.3	0	-4,-5	-	-	18.172	PRINCIPAL:3
ENSMUSG00000061130	Ppm1b	ENSMUST00000234710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061130	Ppm1b	ENSMUST00000112305	ENSMUSP00000107924	TRANSLATION	protein_coding	-	CCDS50201.1	1	390	13	3.5	1.5	391.3	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000080217	ENSMUSP00000079107	TRANSLATION	protein_coding	-	CCDS50199.1	1	477	13	3.5	2.9	391.3	0	-4,-5	-	-	18.655	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000234540	ENSMUSP00000157282	TRANSLATION	protein_coding	-	CCDS50200.1	-	393	13	3.5	3.9	391.3	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000234332	ENSMUSP00000157013	TRANSLATION	protein_coding	-	CCDS50201.1	-	390	13	3.5	1.5	391.3	0	-4,-5	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000112307	ENSMUSP00000107926	TRANSLATION	protein_coding	-	CCDS50200.1	1	393	13	3.5	3.9	391.3	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000061130	Ppm1b	ENSMUST00000234851	ENSMUSP00000157058	TRANSLATION	protein_coding	-	-	-	402	13	3.5	0	391.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000043705	Capn13	ENSMUST00000095208	ENSMUSP00000092832	TRANSLATION	protein_coding	-	CCDS37690.1	5	665	12	12.815	0.5	392.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000043705	Capn13	ENSMUST00000233432	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054723	Vmac	ENSMUST00000067931	ENSMUSP00000064120	TRANSLATION	protein_coding	-	CCDS28912.1	1	174	0	0	1.5	0	0	-4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000054723	Vmac	ENSMUST00000233208	ENSMUSP00000156940	TRANSLATION	protein_coding	stop	-	-	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054723	Vmac	ENSMUST00000233400	ENSMUSP00000156428	TRANSLATION	protein_coding	stop	-	-	36	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054723	Vmac	ENSMUST00000164907	ENSMUSP00000132817	TRANSLATION	protein_coding	-	CCDS50154.1	1	82	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000024254	Abcg8	ENSMUST00000171915	ENSMUSP00000126675	TRANSLATION	protein_coding	-	CCDS84337.1	1	672	16	12.6	1.5	218.1	7	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024254	Abcg8	ENSMUST00000170725	ENSMUSP00000127785	TRANSLATION	protein_coding	-	CCDS70849.1	1	546	7	9.35	1.5	180.3	7	-4,-7	-	-	3.732	MINOR
ENSMUSG00000024254	Abcg8	ENSMUST00000045714	ENSMUSP00000035246	TRANSLATION	protein_coding	-	CCDS29002.1	1	673	16	12.6	1.5	218.1	7	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000005936	Kctd20	ENSMUST00000153462	ENSMUSP00000120301	TRANSLATION	protein_coding	stop	-	2	202	0	0	0	166.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000168507	ENSMUSP00000131435	TRANSLATION	protein_coding	-	CCDS28588.1	1	419	0	0	6.3	166.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000005936	Kctd20	ENSMUST00000233334	ENSMUSP00000156738	TRANSLATION	protein_coding	-	-	-	173	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000232980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005936	Kctd20	ENSMUST00000233197	ENSMUSP00000156936	TRANSLATION	protein_coding	-	CCDS28588.1	-	419	0	0	6.3	166.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000005936	Kctd20	ENSMUST00000232874	ENSMUSP00000156575	TRANSLATION	protein_coding	-	-	-	274	0	0	5.9	112.6	0	-4,-5	-	-	4.61	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000153831	ENSMUSP00000122690	TRANSLATION	protein_coding	stop	-	5	286	0	0	0	166.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000150858	ENSMUSP00000156477	TRANSLATION	protein_coding	-	-	3	173	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000122163	ENSMUSP00000112957	TRANSLATION	nonsense_mediated_decay	-	-	5	170	0	0	0	36.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000233847	ENSMUSP00000156448	TRANSLATION	nonsense_mediated_decay	-	-	-	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000118762	ENSMUSP00000112890	TRANSLATION	protein_coding	-	-	1	348	0	0	2.2	166.6	0	-4,-5	-	-	6.452	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000232729	ENSMUSP00000156465	TRANSLATION	nonsense_mediated_decay	-	-	-	72	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000233145	ENSMUSP00000156877	TRANSLATION	nonsense_mediated_decay	-	-	-	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000232772	ENSMUSP00000156907	TRANSLATION	protein_coding	-	-	-	253	0	0	1.2	0	0	-4,-5	-	-	0.076	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000117672	ENSMUSP00000113740	TRANSLATION	protein_coding	-	-	5	348	0	0	2.2	166.6	0	-4,-5	-	-	6.452	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000233064	ENSMUSP00000156849	TRANSLATION	protein_coding	stop	-	-	94	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005936	Kctd20	ENSMUST00000057174	ENSMUSP00000062282	TRANSLATION	protein_coding	-	-	1	353	0	0	0	161.3	0	-4,-5	-	-	5.682	MINOR
ENSMUSG00000024096	Ralbp1	ENSMUST00000166543	ENSMUSP00000129448	TRANSLATION	protein_coding	-	CCDS37678.1	1	648	0	4.95	0.5	150	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024096	Ralbp1	ENSMUST00000233784	ENSMUSP00000156615	TRANSLATION	protein_coding	stop	-	-	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024096	Ralbp1	ENSMUST00000233054	ENSMUSP00000156660	TRANSLATION	protein_coding	-	-	-	594	0	3.2	0	149.6	0	-4,-6	-	-	8.478	MINOR
ENSMUSG00000024096	Ralbp1	ENSMUST00000232885	ENSMUSP00000156891	TRANSLATION	protein_coding	stop	-	-	81	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024096	Ralbp1	ENSMUST00000233399	ENSMUSP00000156396	TRANSLATION	protein_coding	stop	-	-	95	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024096	Ralbp1	ENSMUST00000024905	ENSMUSP00000024905	TRANSLATION	protein_coding	-	CCDS37678.1	1	648	0	4.95	0.5	150	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024096	Ralbp1	ENSMUST00000232848	ENSMUSP00000156749	TRANSLATION	protein_coding	start	-	-	224	0	1.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095677	Dynlt1f	ENSMUST00000232452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095677	Dynlt1f	ENSMUST00000179554	ENSMUSP00000135978	TRANSLATION	protein_coding	-	CCDS57043.1	1	113	0	3.33	21.5	110.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000023961	Enpp4	ENSMUST00000143137	ENSMUSP00000114429	TRANSLATION	protein_coding	-	CCDS28803.1	1	456	12	3	7.5	280.8	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000023961	Enpp4	ENSMUST00000024757	ENSMUSP00000024757	TRANSLATION	protein_coding	-	CCDS28803.1	1	456	12	3	7.5	280.8	1	3,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000062753	AI413582	ENSMUST00000231753	ENSMUSP00000156360	TRANSLATION	protein_coding	-	-	-	82	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000062753	AI413582	ENSMUST00000145183	ENSMUSP00000156249	TRANSLATION	protein_coding	-	CCDS37521.1	3	102	0	0	8.4	0	1	-3,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000062753	AI413582	ENSMUST00000231948	ENSMUSP00000156342	TRANSLATION	nonsense_mediated_decay	-	-	-	49	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062753	AI413582	ENSMUST00000154473	ENSMUSP00000116199	TRANSLATION	protein_coding	-	CCDS37521.1	1	102	0	0	8.4	0	1	-3,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000062753	AI413582	ENSMUST00000232203	ENSMUSP00000156365	TRANSLATION	protein_coding	-	-	-	89	0	0	0	0	1	-3,-7	-	-	0	MINOR
ENSMUSG00000062753	AI413582	ENSMUST00000138728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062753	AI413582	ENSMUST00000080190	ENSMUSP00000079081	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	0	0	0	1	-3,-7	-	-	-1	MINOR
ENSMUSG00000062753	AI413582	ENSMUST00000231365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062753	AI413582	ENSMUST00000232276	ENSMUSP00000156204	TRANSLATION	protein_coding	-	CCDS37521.1	-	102	0	0	8.4	0	1	-3,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000036557	Stpg4	ENSMUST00000040609	ENSMUSP00000044250	TRANSLATION	protein_coding	-	CCDS50206.1	1	247	0	0	1.5	9.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036557	Stpg4	ENSMUST00000187078	ENSMUSP00000140579	TRANSLATION	protein_coding	-	-	3	207	0	0	0	9.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036557	Stpg4	ENSMUST00000189487	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036557	Stpg4	ENSMUST00000189157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036557	Stpg4	ENSMUST00000186211	ENSMUSP00000140203	TRANSLATION	protein_coding	-	-	2	178	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000023971	Rrp36	ENSMUST00000233136	ENSMUSP00000156646	TRANSLATION	protein_coding	-	-	-	244	0	0	2.2	164	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000023971	Rrp36	ENSMUST00000233247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023971	Rrp36	ENSMUST00000233155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023971	Rrp36	ENSMUST00000232697	ENSMUSP00000156793	TRANSLATION	protein_coding	stop	-	-	179	0	0	0	49.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023971	Rrp36	ENSMUST00000024766	ENSMUSP00000024766	TRANSLATION	protein_coding	-	CCDS37639.1	1	226	0	0	0.5	164	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000057789	Bak1	ENSMUST00000143158	ENSMUSP00000122521	TRANSLATION	protein_coding	-	-	3	146	0	2.8	0	0	0	-4,-5	-	-	0.798	MINOR
ENSMUSG00000057789	Bak1	ENSMUST00000237411	ENSMUSP00000158395	TRANSLATION	nonsense_mediated_decay	-	-	-	79	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057789	Bak1	ENSMUST00000078691	ENSMUSP00000077757	TRANSLATION	protein_coding	-	CCDS28558.1	1	209	0	5.4	3.9	91.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000057789	Bak1	ENSMUST00000025034	ENSMUSP00000025034	TRANSLATION	nonsense_mediated_decay	-	-	1	151	0	3.04	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000118471	Gm50461	ENSMUST00000238764	ENSMUSP00000158753	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	84	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000023994	Nfya	ENSMUST00000160319	ENSMUSP00000124245	TRANSLATION	protein_coding	-	-	5	341	0	2.1	8.3	96.3	0	-4,-5	-	-	14.085	ALTERNATIVE:1
ENSMUSG00000023994	Nfya	ENSMUST00000162460	ENSMUSP00000123785	TRANSLATION	protein_coding	-	CCDS28867.1	1	318	0	2.1	11.5	96.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000023994	Nfya	ENSMUST00000161603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023994	Nfya	ENSMUST00000046719	ENSMUSP00000043909	TRANSLATION	protein_coding	-	CCDS50142.1	1	347	0	2.1	11.5	96.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000023994	Nfya	ENSMUST00000161117	ENSMUSP00000124965	TRANSLATION	protein_coding	start/stop	-	3	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023994	Nfya	ENSMUST00000159063	ENSMUSP00000124404	TRANSLATION	protein_coding	-	CCDS84320.1	1	312	0	2.1	8.3	96.3	0	-4,-5	-	-	14.085	ALTERNATIVE:1
ENSMUSG00000023994	Nfya	ENSMUST00000161256	ENSMUSP00000125034	TRANSLATION	protein_coding	start	-	3	211	0	2.1	0	96.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000023994	Nfya	ENSMUST00000159535	ENSMUSP00000124501	TRANSLATION	protein_coding	stop	-	3	232	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023994	Nfya	ENSMUST00000163066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023994	Nfya	ENSMUST00000159237	ENSMUSP00000124115	TRANSLATION	protein_coding	start	-	3	208	0	2.1	0	96.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023994	Nfya	ENSMUST00000161686	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023994	Nfya	ENSMUST00000078800	ENSMUSP00000077853	TRANSLATION	protein_coding	-	CCDS84321.1	5	346	0	2.1	11.5	96.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000023994	Nfya	ENSMUST00000160804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091771	Vmn2r103	ENSMUST00000172203	ENSMUSP00000126756	TRANSLATION	protein_coding	-	CCDS49980.1	5	856	0	3.16	1.5	391.1	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000007570	Fance	ENSMUST00000114804	ENSMUSP00000110452	TRANSLATION	protein_coding	-	-	1	484	0	7.43	0.5	240.1	0	-4,-6	-	-	4.002	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000128079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007570	Fance	ENSMUST00000140404	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007570	Fance	ENSMUST00000133527	ENSMUSP00000122226	TRANSLATION	nonsense_mediated_decay	-	-	5	384	0	2.9	0	52.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000088007	ENSMUSP00000085322	TRANSLATION	nonsense_mediated_decay	-	-	5	406	0	3.5	0	115.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000146104	ENSMUSP00000114386	TRANSLATION	nonsense_mediated_decay	start	-	3	151	0	3.5	0	115.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000123248	ENSMUSP00000119663	TRANSLATION	protein_coding	start	-	3	154	0	4.58	0	215.5	0	-2,2	-	-	-1	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000141648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007570	Fance	ENSMUST00000114803	ENSMUSP00000110451	TRANSLATION	protein_coding	-	-	1	526	0	8.43	0.5	359.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000007570	Fance	ENSMUST00000151312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007570	Fance	ENSMUST00000114801	ENSMUSP00000110449	TRANSLATION	protein_coding	-	-	1	462	0	6.83	0	178.8	0	-4,-6	-	-	2.802	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000124870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007570	Fance	ENSMUST00000233705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007570	Fance	ENSMUST00000233381	ENSMUSP00000156442	TRANSLATION	nonsense_mediated_decay	start	-	-	355	0	3.5	0	115.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000007570	Fance	ENSMUST00000156569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007570	Fance	ENSMUST00000156505	ENSMUSP00000118622	TRANSLATION	protein_coding	start	-	2	71	0	2.25	0	80.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000113568	ENSMUSP00000109198	TRANSLATION	nonsense_mediated_decay	-	-	1	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000160673	ENSMUSP00000123743	TRANSLATION	protein_coding	-	-	1	596	7	5.04	1.5	405	0	-4,-6	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000039153	Runx2	ENSMUST00000162629	ENSMUSP00000124374	TRANSLATION	protein_coding	-	-	5	506	7	5.04	0	405	0	-4,-2	-	-	17.34	ALTERNATIVE:2
ENSMUSG00000039153	Runx2	ENSMUST00000160199	ENSMUSP00000125196	TRANSLATION	protein_coding	start/stop	-	3	147	7	3.3	0	181.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000162373	ENSMUSP00000124494	TRANSLATION	protein_coding	-	-	5	492	7	5.37	1	405	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000039153	Runx2	ENSMUST00000162816	ENSMUSP00000125498	TRANSLATION	nonsense_mediated_decay	-	-	1	283	7	4.13	0	276.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000238400	ENSMUSP00000158748	TRANSLATION	protein_coding	-	-	-	548	7	4.44	0	276.6	0	-4,-2	-	-	10.14	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000162878	ENSMUSP00000123707	TRANSLATION	protein_coding	-	CCDS70815.1	1	421	0	3.73	0.5	326	0	-4,-2	-	-	3.978	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000161489	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039153	Runx2	ENSMUST00000162130	ENSMUSP00000124199	TRANSLATION	protein_coding	start/stop	-	1	231	7	4.3	0	244.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000160672	ENSMUSP00000125284	TRANSLATION	nonsense_mediated_decay	start	-	1	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039153	Runx2	ENSMUST00000113571	ENSMUSP00000109201	TRANSLATION	protein_coding	-	CCDS37624.2	5	528	7	5.04	1.5	405	0	-4,-2	-	-	17.34	PRINCIPAL:3
ENSMUSG00000039153	Runx2	ENSMUST00000159943	ENSMUSP00000124918	TRANSLATION	protein_coding	-	CCDS37624.2	1	528	7	5.04	1.5	405	0	-4,-2	-	-	17.34	PRINCIPAL:3
ENSMUSG00000039153	Runx2	ENSMUST00000113572	ENSMUSP00000109202	TRANSLATION	protein_coding	-	CCDS50116.1	1	514	7	5.37	1.5	405	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000096847	Tmem151b	ENSMUST00000180252	ENSMUSP00000136337	TRANSLATION	protein_coding	-	CCDS28810.1	1	561	0	0	1.5	708.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034595	Ppp1r18	ENSMUST00000122899	ENSMUSP00000120343	TRANSLATION	protein_coding	-	CCDS50094.1	1	594	0	0	0.5	231.2	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000034595	Ppp1r18	ENSMUST00000127442	ENSMUSP00000115753	TRANSLATION	protein_coding	-	-	1	609	0	0	0.5	231.2	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000034595	Ppp1r18	ENSMUST00000187690	ENSMUSP00000141094	TRANSLATION	protein_coding	-	CCDS50094.1	1	594	0	0	0.5	231.2	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000034595	Ppp1r18	ENSMUST00000190496	ENSMUSP00000140652	TRANSLATION	protein_coding	-	-	1	166	0	0	0	108.3	0	-4,-1	-	-	0	MINOR
ENSMUSG00000034595	Ppp1r18	ENSMUST00000113814	ENSMUSP00000109445	TRANSLATION	protein_coding	-	CCDS50094.1	1	594	0	0	0.5	231.2	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000034595	Ppp1r18	ENSMUST00000144382	ENSMUSP00000116100	TRANSLATION	protein_coding	-	CCDS50094.1	1	594	0	0	0.5	231.2	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000039601	Rcan2	ENSMUST00000229240	ENSMUSP00000155555	TRANSLATION	protein_coding	stop	-	-	128	0	1.77	0	141.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039601	Rcan2	ENSMUST00000229744	ENSMUSP00000155082	TRANSLATION	protein_coding	-	CCDS28800.1	-	243	0	1.32	7.5	213.8	0	-4,-5	-	-	12.25	MINOR
ENSMUSG00000039601	Rcan2	ENSMUST00000044792	ENSMUSP00000048013	TRANSLATION	protein_coding	-	CCDS28801.1	1	197	0	1.77	14.1	217.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000039601	Rcan2	ENSMUST00000229939	ENSMUSP00000155543	TRANSLATION	protein_coding	-	-	-	29	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000039601	Rcan2	ENSMUST00000044895	ENSMUSP00000039473	TRANSLATION	protein_coding	-	CCDS28800.1	1	243	0	1.32	7.5	213.8	0	-4,-5	-	-	12.25	MINOR
ENSMUSG00000039601	Rcan2	ENSMUST00000177857	ENSMUSP00000137211	TRANSLATION	protein_coding	-	CCDS28801.1	1	197	0	1.77	14.1	217.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000039601	Rcan2	ENSMUST00000228972	ENSMUSP00000154835	TRANSLATION	protein_coding	stop	-	-	228	0	1.32	0	200.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007603	Dus3l	ENSMUST00000233290	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007603	Dus3l	ENSMUST00000232684	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007603	Dus3l	ENSMUST00000233549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007603	Dus3l	ENSMUST00000007747	ENSMUSP00000007747	TRANSLATION	protein_coding	-	CCDS28914.1	1	637	17	4.52	1.5	193.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090083	Rnf8	ENSMUST00000234245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090083	Rnf8	ENSMUST00000172800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090083	Rnf8	ENSMUST00000173449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090083	Rnf8	ENSMUST00000234362	ENSMUSP00000157202	TRANSLATION	nonsense_mediated_decay	-	-	-	199	0	3	0	50	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090083	Rnf8	ENSMUST00000172485	ENSMUSP00000134697	TRANSLATION	nonsense_mediated_decay	-	-	5	98	0	2	0	22.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090083	Rnf8	ENSMUST00000162588	ENSMUSP00000124566	TRANSLATION	protein_coding	stop	-	3	259	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000090083	Rnf8	ENSMUST00000024817	ENSMUSP00000024817	TRANSLATION	protein_coding	-	CCDS37538.1	1	488	8	6	1.5	88.8	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000090083	Rnf8	ENSMUST00000161952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090083	Rnf8	ENSMUST00000162417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090083	Rnf8	ENSMUST00000234816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090083	Rnf8	ENSMUST00000234498	ENSMUSP00000157381	TRANSLATION	protein_coding	-	-	-	138	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090083	Rnf8	ENSMUST00000161242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043740	B430306N03Rik	ENSMUST00000049614	ENSMUSP00000054890	TRANSLATION	protein_coding	-	CCDS28864.1	1	289	0	0.64	0.5	55.8	0	4,-1	-	-	9.366	PRINCIPAL:1
ENSMUSG00000043740	B430306N03Rik	ENSMUST00000124205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043740	B430306N03Rik	ENSMUST00000129825	ENSMUSP00000122378	TRANSLATION	nonsense_mediated_decay	-	-	1	173	0	1.14	0	55.8	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024217	Snrpc	ENSMUST00000071006	ENSMUSP00000063976	TRANSLATION	protein_coding	-	CCDS28570.1	1	159	4	2.5	19.5	79.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024217	Snrpc	ENSMUST00000137581	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024217	Snrpc	ENSMUST00000232873	ENSMUSP00000156707	TRANSLATION	protein_coding	-	CCDS28570.1	-	159	4	2.5	19.5	79.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024217	Snrpc	ENSMUST00000233752	ENSMUSP00000156747	TRANSLATION	protein_coding	-	-	-	157	2	2	0	34.6	0	-4,-5	-	-	9.404	MINOR
ENSMUSG00000024217	Snrpc	ENSMUST00000233657	ENSMUSP00000156644	TRANSLATION	protein_coding	-	-	-	182	4	2.5	0	71.4	0	-4,-5	-	-	15.37	MINOR
ENSMUSG00000117495	Gm4125	ENSMUST00000234517	ENSMUSP00000159029	TRANSLATION	protein_coding	-	-	-	278	0	0	1	52.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000042625	Safb2	ENSMUST00000134497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000142940	ENSMUSP00000123229	TRANSLATION	protein_coding	start	-	1	248	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000133604	ENSMUSP00000119324	TRANSLATION	nonsense_mediated_decay	-	-	1	179	0	0	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000146070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000142752	ENSMUSP00000119141	TRANSLATION	protein_coding	start	-	5	66	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000154991	ENSMUSP00000117696	TRANSLATION	protein_coding	start	-	1	249	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000146958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000140037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000124457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000127947	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000075510	ENSMUSP00000074953	TRANSLATION	protein_coding	-	CCDS28907.2	1	991	0	2.698	1.5	91.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042625	Safb2	ENSMUST00000131056	ENSMUSP00000120750	TRANSLATION	protein_coding	start/stop	-	5	295	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000156640	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042625	Safb2	ENSMUST00000155983	ENSMUSP00000116363	TRANSLATION	nonsense_mediated_decay	-	-	5	214	0	0	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000134741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042625	Safb2	ENSMUST00000144255	ENSMUSP00000123673	TRANSLATION	nonsense_mediated_decay	-	-	1	179	0	0	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042625	Safb2	ENSMUST00000124111	ENSMUSP00000120845	TRANSLATION	protein_coding	start	-	1	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025736	Jmjd8	ENSMUST00000123692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025736	Jmjd8	ENSMUST00000123560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025736	Jmjd8	ENSMUST00000152434	ENSMUSP00000119378	TRANSLATION	nonsense_mediated_decay	-	-	3	186	0	1.31	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025736	Jmjd8	ENSMUST00000123582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025736	Jmjd8	ENSMUST00000133595	ENSMUSP00000122744	TRANSLATION	protein_coding	-	-	1	269	2	3.51	1.5	44.5	0	2,-3	-	-	14	ALTERNATIVE:2
ENSMUSG00000025736	Jmjd8	ENSMUST00000143296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025736	Jmjd8	ENSMUST00000144589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025736	Jmjd8	ENSMUST00000026832	ENSMUSP00000026832	TRANSLATION	protein_coding	-	CCDS28532.1	1	271	2	3.51	1.5	44.5	0	2,-3	-	-	14	PRINCIPAL:2
ENSMUSG00000090894	Olfr110	ENSMUST00000216472	ENSMUSP00000149213	TRANSLATION	protein_coding	-	CCDS28754.1	5	317	0	0.42	3.9	179.3	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000090894	Olfr110	ENSMUST00000168318	ENSMUSP00000131089	TRANSLATION	protein_coding	-	CCDS28754.1	2	317	0	0.42	3.9	179.3	5	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000054469	Lclat1	ENSMUST00000134149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054469	Lclat1	ENSMUST00000130574	ENSMUSP00000116535	TRANSLATION	protein_coding	stop	-	2	55	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000054469	Lclat1	ENSMUST00000067545	ENSMUSP00000068690	TRANSLATION	protein_coding	-	CCDS37689.1	1	376	2	0	8.8	143.3	6	-1,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000054469	Lclat1	ENSMUST00000232703	ENSMUSP00000156922	TRANSLATION	protein_coding	stop	-	-	355	2	0	0	143.3	6	-1,-5	-	-	-1	MINOR
ENSMUSG00000054469	Lclat1	ENSMUST00000149064	ENSMUSP00000119291	TRANSLATION	protein_coding	stop	-	2	203	2	0	0	74	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000054469	Lclat1	ENSMUST00000131335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024448	H2-M10.1	ENSMUST00000172576	ENSMUSP00000133408	TRANSLATION	protein_coding	start	-	1	287	0	3.71	0.5	200.9	1	3,-1	-	-	-1	MINOR
ENSMUSG00000024448	H2-M10.1	ENSMUST00000025322	ENSMUSP00000025322	TRANSLATION	protein_coding	-	CCDS28721.1	1	331	0	4.71	0.5	237.3	1	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000090273	Prr22	ENSMUST00000187612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090273	Prr22	ENSMUST00000168666	ENSMUSP00000127457	TRANSLATION	protein_coding	-	CCDS57104.1	3	422	0	0	0.5	479.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016206	H2-M3	ENSMUST00000038580	ENSMUSP00000035687	TRANSLATION	protein_coding	-	CCDS37617.1	1	336	3	4.35	0.5	307.5	0	-2,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000054134	Umodl1	ENSMUST00000066554	ENSMUSP00000067443	TRANSLATION	protein_coding	-	CCDS37543.1	1	1348	14	2.5048	0.5	248.1	1	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000054134	Umodl1	ENSMUST00000237889	ENSMUSP00000157726	TRANSLATION	protein_coding	-	-	-	1319	14	2.5048	0.5	248.1	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000054134	Umodl1	ENSMUST00000066981	ENSMUSP00000065470	TRANSLATION	protein_coding	-	-	1	1233	14	2.5048	0	248.1	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000054134	Umodl1	ENSMUST00000235156	ENSMUSP00000157913	TRANSLATION	protein_coding	-	-	-	1233	14	2.5048	0	248.1	1	3,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000054134	Umodl1	ENSMUST00000235827	ENSMUSP00000157567	TRANSLATION	protein_coding	-	-	-	70	0	0.1848	0	0	1	-4,-7	-	-	0.444	MINOR
ENSMUSG00000054134	Umodl1	ENSMUST00000114555	ENSMUSP00000110202	TRANSLATION	protein_coding	-	CCDS37543.1	5	1348	14	2.5048	0.5	248.1	1	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000014769	Psmb1	ENSMUST00000014913	ENSMUSP00000014913	TRANSLATION	protein_coding	-	CCDS28411.1	1	240	0	5.75	6.3	134.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000014769	Psmb1	ENSMUST00000231696	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014769	Psmb1	ENSMUST00000231341	ENSMUSP00000156355	TRANSLATION	protein_coding	-	-	-	203	0	4.75	0	120.4	0	-4,-5	-	-	9.138	MINOR
ENSMUSG00000014769	Psmb1	ENSMUST00000232500	ENSMUSP00000156359	TRANSLATION	protein_coding	-	-	-	140	0	3	0	68.8	0	-4,-2	-	-	2.538	MINOR
ENSMUSG00000024101	Washc1	ENSMUST00000233060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024101	Washc1	ENSMUST00000233500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024101	Washc1	ENSMUST00000072383	ENSMUSP00000072220	TRANSLATION	protein_coding	-	CCDS28944.1	1	475	0	0	1.5	420.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024101	Washc1	ENSMUST00000233604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024101	Washc1	ENSMUST00000233311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024101	Washc1	ENSMUST00000116556	ENSMUSP00000112255	TRANSLATION	protein_coding	-	CCDS28944.1	1	475	0	0	1.5	420.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024101	Washc1	ENSMUST00000233589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024101	Washc1	ENSMUST00000233354	ENSMUSP00000156933	TRANSLATION	protein_coding	stop	-	-	49	0	0	0	51	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091614	Gm17657	ENSMUST00000168877	ENSMUSP00000129330	TRANSLATION	protein_coding	stop	-	-	170	0	0	0	219.7	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000091614	Gm17657	ENSMUST00000234305	ENSMUSP00000157004	TRANSLATION	protein_coding	-	-	-	184	0	0	1.5	219.7	4	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043537	Vmn1r225	ENSMUST00000233982	ENSMUSP00000156633	TRANSLATION	protein_coding	-	CCDS28424.1	-	298	0	0	1.5	80.6	7	-3,-5	-	-	5.904	PRINCIPAL:2
ENSMUSG00000043537	Vmn1r225	ENSMUST00000061660	ENSMUSP00000056068	TRANSLATION	protein_coding	-	CCDS28424.1	-	298	0	0	1.5	80.6	7	-3,-5	-	-	5.904	PRINCIPAL:2
ENSMUSG00000043537	Vmn1r225	ENSMUST00000233346	ENSMUSP00000156801	TRANSLATION	protein_coding	-	-	-	232	0	0	0	81.9	6	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000057246	BC051142	ENSMUST00000139063	ENSMUSP00000121839	TRANSLATION	protein_coding	stop	-	5	149	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000078615	ENSMUSP00000077685	TRANSLATION	protein_coding	-	CCDS37586.1	1	393	0	0	0.5	0	1	-1,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000057246	BC051142	ENSMUST00000131998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057246	BC051142	ENSMUST00000142208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057246	BC051142	ENSMUST00000223957	ENSMUSP00000153432	TRANSLATION	protein_coding	start/stop	-	-	144	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000149121	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057246	BC051142	ENSMUST00000135217	ENSMUSP00000119513	TRANSLATION	protein_coding	stop	-	3	67	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000142317	ENSMUSP00000117413	TRANSLATION	protein_coding	stop	-	5	117	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000236732	ENSMUSP00000158397	TRANSLATION	nonsense_mediated_decay	start	-	-	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000097348	ENSMUSP00000094961	TRANSLATION	protein_coding	start	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000114175	ENSMUSP00000109812	TRANSLATION	protein_coding	-	CCDS50076.1	1	286	0	0	0.5	0	1	-1,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000057246	BC051142	ENSMUST00000223765	ENSMUSP00000153186	TRANSLATION	protein_coding	start/stop	-	-	246	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057246	BC051142	ENSMUST00000235202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000123670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000147220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000139639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000152676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024186	Rgs11	ENSMUST00000155072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000122058	ENSMUSP00000113885	TRANSLATION	protein_coding	-	-	2	464	0	10.8696	1.5	194.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000024186	Rgs11	ENSMUST00000146683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000025020	ENSMUSP00000025020	TRANSLATION	protein_coding	-	CCDS37511.1	2	466	0	10.8696	1.5	194.5	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000024186	Rgs11	ENSMUST00000127594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000152299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024186	Rgs11	ENSMUST00000126464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024132	Eci1	ENSMUST00000234150	ENSMUSP00000157319	TRANSLATION	protein_coding	stop	-	-	128	17	3	0	166	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024132	Eci1	ENSMUST00000234731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024132	Eci1	ENSMUST00000235124	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024132	Eci1	ENSMUST00000234019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024132	Eci1	ENSMUST00000024946	ENSMUSP00000024946	TRANSLATION	protein_coding	-	-	1	286	17	5.75	1	309.9	0	-4,0	-	-	17.67	ALTERNATIVE:2
ENSMUSG00000024132	Eci1	ENSMUST00000234304	ENSMUSP00000157291	TRANSLATION	protein_coding	-	CCDS28480.1	-	289	17	5.75	1.5	315.4	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000024132	Eci1	ENSMUST00000234023	ENSMUSP00000157160	TRANSLATION	protein_coding	-	-	-	248	17	5	0	313.9	0	-4,-6	-	-	16.41	MINOR
ENSMUSG00000024327	Slc39a7	ENSMUST00000025186	ENSMUSP00000025186	TRANSLATION	protein_coding	-	CCDS37576.1	1	476	0	0	0.5	272.3	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000024327	Slc39a7	ENSMUST00000167145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024327	Slc39a7	ENSMUST00000170491	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024327	Slc39a7	ENSMUST00000173810	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024327	Slc39a7	ENSMUST00000169397	ENSMUSP00000130102	TRANSLATION	protein_coding	-	CCDS37576.1	5	476	0	0	0.5	272.3	4	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000024327	Slc39a7	ENSMUST00000171872	ENSMUSP00000133146	TRANSLATION	protein_coding	stop	-	5	161	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000090115	Usp49	ENSMUST00000145314	ENSMUSP00000118675	TRANSLATION	protein_coding	stop	-	2	37	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000090115	Usp49	ENSMUST00000152724	ENSMUSP00000120034	TRANSLATION	protein_coding	start	-	1	453	4	2.33	0	121	0	-4,0	-	-	-1	MINOR
ENSMUSG00000090115	Usp49	ENSMUST00000024779	ENSMUSP00000024779	TRANSLATION	protein_coding	-	CCDS28852.1	1	685	14	4.29	3.9	262.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000090115	Usp49	ENSMUST00000131550	ENSMUSP00000118100	TRANSLATION	nonsense_mediated_decay	start	-	5	52	0	0.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024131	Slc3a1	ENSMUST00000024944	ENSMUSP00000024944	TRANSLATION	protein_coding	-	CCDS37711.1	1	685	21	6.62	1.5	281.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000040260	Daam2	ENSMUST00000224595	ENSMUSP00000153095	TRANSLATION	protein_coding	-	-	-	524	0	5.225	0	370.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000040260	Daam2	ENSMUST00000057610	ENSMUSP00000052085	TRANSLATION	protein_coding	-	CCDS37648.1	1	1115	0	15.425	0.5	733.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040260	Daam2	ENSMUST00000226030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040260	Daam2	ENSMUST00000224954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096140	Ankrd66	ENSMUST00000178772	ENSMUSP00000136879	TRANSLATION	protein_coding	-	CCDS57095.1	5	192	0	1.84	0.5	58.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015599	Ttbk1	ENSMUST00000225808	ENSMUSP00000153386	TRANSLATION	protein_coding	-	-	-	765	0	8.75	0.5	112.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000015599	Ttbk1	ENSMUST00000047034	ENSMUSP00000044580	TRANSLATION	protein_coding	-	CCDS50125.1	5	1308	0	8.75	0.5	112.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000015599	Ttbk1	ENSMUST00000223818	ENSMUSP00000153583	TRANSLATION	nonsense_mediated_decay	start	-	-	71	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034382	AI661453	ENSMUST00000037701	ENSMUSP00000045345	TRANSLATION	protein_coding	-	-	1	193	0	0	0	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000034382	AI661453	ENSMUST00000150819	ENSMUSP00000120133	TRANSLATION	protein_coding	-	CCDS50131.1	5	1206	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000001227	Sema6b	ENSMUST00000167545	ENSMUSP00000130985	TRANSLATION	protein_coding	-	CCDS28896.1	1	886	0	11.7	0.5	421.1	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000001227	Sema6b	ENSMUST00000001256	ENSMUSP00000001256	TRANSLATION	protein_coding	-	CCDS28896.1	1	886	0	11.7	0.5	421.1	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000015476	Prrt1	ENSMUST00000172945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015476	Prrt1	ENSMUST00000015620	ENSMUSP00000015620	TRANSLATION	protein_coding	-	CCDS28653.1	5	306	0	0	6.3	74.9	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000043311	D17H6S53E	ENSMUST00000061859	ENSMUSP00000061264	TRANSLATION	protein_coding	-	CCDS28686.1	3	293	0	0	1.5	457.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000043311	D17H6S53E	ENSMUST00000174311	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038146	Notch3	ENSMUST00000236544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038146	Notch3	ENSMUST00000087723	ENSMUSP00000085016	TRANSLATION	protein_coding	-	CCDS28614.1	1	2318	28	16.6	0.5	1187.2	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000038146	Notch3	ENSMUST00000235816	ENSMUSP00000158243	TRANSLATION	protein_coding	start/stop	-	-	239	0	2.7	0	63.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024150	Mcfd2	ENSMUST00000145895	ENSMUSP00000117105	TRANSLATION	protein_coding	-	-	2	120	5	2.1	0	0	0	4,-1	-	-	4.998	MINOR
ENSMUSG00000024150	Mcfd2	ENSMUST00000151155	ENSMUSP00000119856	TRANSLATION	protein_coding	stop	-	5	131	6	2.85	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024150	Mcfd2	ENSMUST00000155904	ENSMUSP00000114354	TRANSLATION	protein_coding	stop	-	2	74	0	1.35	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024150	Mcfd2	ENSMUST00000139258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024150	Mcfd2	ENSMUST00000129616	ENSMUSP00000123352	TRANSLATION	protein_coding	-	CCDS29015.1	3	145	11	3.6	3.9	32.8	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000024150	Mcfd2	ENSMUST00000144236	ENSMUSP00000121820	TRANSLATION	protein_coding	-	CCDS29015.1	1	145	11	3.6	3.9	32.8	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000024150	Mcfd2	ENSMUST00000024963	ENSMUSP00000024963	TRANSLATION	protein_coding	-	CCDS29015.1	1	145	11	3.6	3.9	32.8	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000032796	Lama1	ENSMUST00000035471	ENSMUSP00000043957	TRANSLATION	protein_coding	-	CCDS37681.1	1	3083	7	37.65	1.5	1865.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000032796	Lama1	ENSMUST00000233821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032796	Lama1	ENSMUST00000233224	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024397	Aif1	ENSMUST00000172693	ENSMUSP00000134214	TRANSLATION	protein_coding	-	CCDS28689.1	1	147	3	4.58	7.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024397	Aif1	ENSMUST00000025257	ENSMUSP00000025257	TRANSLATION	protein_coding	-	CCDS28689.1	2	147	3	4.58	7.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024397	Aif1	ENSMUST00000173324	ENSMUSP00000133709	TRANSLATION	protein_coding	-	CCDS28689.1	1	147	3	4.58	7.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024397	Aif1	ENSMUST00000174044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024397	Aif1	ENSMUST00000173281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024397	Aif1	ENSMUST00000172679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024397	Aif1	ENSMUST00000173106	ENSMUSP00000134107	TRANSLATION	protein_coding	stop	-	3	128	3	2.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019320	Noxo1	ENSMUST00000124864	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019320	Noxo1	ENSMUST00000141522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019320	Noxo1	ENSMUST00000141095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019320	Noxo1	ENSMUST00000126342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019320	Noxo1	ENSMUST00000152527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019320	Noxo1	ENSMUST00000019464	ENSMUSP00000019464	TRANSLATION	protein_coding	-	CCDS50018.1	1	349	0	5.13	1.5	71.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000019320	Noxo1	ENSMUST00000123026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019320	Noxo1	ENSMUST00000150313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092349	Smim40	ENSMUST00000172817	ENSMUSP00000154114	TRANSLATION	protein_coding	-	-	1	81	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000071074	Yipf3	ENSMUST00000127378	ENSMUSP00000114937	TRANSLATION	protein_coding	start	-	5	201	0	0	0	38.7	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000071074	Yipf3	ENSMUST00000123311	ENSMUSP00000115951	TRANSLATION	protein_coding	stop	-	5	203	0	0	0	0	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000071074	Yipf3	ENSMUST00000149989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071074	Yipf3	ENSMUST00000145371	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071074	Yipf3	ENSMUST00000095263	ENSMUSP00000092897	TRANSLATION	protein_coding	-	CCDS28823.1	1	347	0	0	4	0	6	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000071074	Yipf3	ENSMUST00000151488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015120	Ube2i	ENSMUST00000173713	ENSMUSP00000134491	TRANSLATION	protein_coding	-	CCDS28513.1	1	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000015120	Ube2i	ENSMUST00000172462	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015120	Ube2i	ENSMUST00000172618	ENSMUSP00000134169	TRANSLATION	protein_coding	-	CCDS28513.1	1	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000015120	Ube2i	ENSMUST00000172569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015120	Ube2i	ENSMUST00000172868	ENSMUSP00000134540	TRANSLATION	protein_coding	-	-	1	101	0	2.895	0	63.8	0	-4,-7	-	-	1.47	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000172587	ENSMUSP00000133590	TRANSLATION	protein_coding	-	-	2	101	0	2.895	0	63.8	0	-4,-7	-	-	1.47	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000173231	ENSMUSP00000133338	TRANSLATION	protein_coding	stop	-	2	22	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000174001	ENSMUSP00000134450	TRANSLATION	protein_coding	-	CCDS28513.1	3	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000015120	Ube2i	ENSMUST00000049911	ENSMUSP00000055714	TRANSLATION	protein_coding	-	CCDS28513.1	3	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000015120	Ube2i	ENSMUST00000173621	ENSMUSP00000134161	TRANSLATION	protein_coding	stop	-	3	103	0	3.33	0	107.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000172520	ENSMUSP00000133311	TRANSLATION	protein_coding	stop	-	3	29	0	1.08	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000173084	ENSMUSP00000134261	TRANSLATION	protein_coding	-	CCDS28513.1	1	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000015120	Ube2i	ENSMUST00000174216	ENSMUSP00000134546	TRANSLATION	protein_coding	-	-	2	101	0	2.88	0	94.8	0	-4,-7	-	-	3.126	MINOR
ENSMUSG00000015120	Ube2i	ENSMUST00000174031	ENSMUSP00000134350	TRANSLATION	protein_coding	-	CCDS28513.1	1	158	0	5.16	21.5	166.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000079605	Zbtb9	ENSMUST00000120016	ENSMUSP00000112778	TRANSLATION	protein_coding	-	CCDS37520.1	1	459	10	0	0.5	76.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079605	Zbtb9	ENSMUST00000237633	ENSMUSP00000157541	TRANSLATION	nonsense_mediated_decay	-	-	-	459	10	0	0.5	76.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014773	Dll1	ENSMUST00000143460	ENSMUSP00000156341	TRANSLATION	protein_coding	stop	-	3	73	0	1	0	61.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000014773	Dll1	ENSMUST00000152416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014773	Dll1	ENSMUST00000124196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014773	Dll1	ENSMUST00000014917	ENSMUSP00000014917	TRANSLATION	protein_coding	-	CCDS37452.1	1	722	17	8.5	2.9	351.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000014773	Dll1	ENSMUST00000129395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014773	Dll1	ENSMUST00000140784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055945	Prr18	ENSMUST00000232566	ENSMUSP00000155995	TRANSLATION	protein_coding	stop	-	-	117	0	0	0	88.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000055945	Prr18	ENSMUST00000069742	ENSMUSP00000069019	TRANSLATION	protein_coding	-	CCDS28382.1	1	307	0	0	1.5	450.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000055945	Prr18	ENSMUST00000163887	ENSMUSP00000127393	TRANSLATION	protein_coding	-	CCDS28382.1	3	307	0	0	1.5	450.5	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079492	Gm11127	ENSMUST00000113742	ENSMUSP00000109371	TRANSLATION	protein_coding	-	CCDS57078.1	1	374	0	4.35	0.5	322.1	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024187	Fam234a	ENSMUST00000234554	ENSMUSP00000157362	TRANSLATION	protein_coding	-	CCDS37512.1	-	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000024187	Fam234a	ENSMUST00000234262	ENSMUSP00000157155	TRANSLATION	protein_coding	-	CCDS37512.1	-	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000024187	Fam234a	ENSMUST00000234175	ENSMUSP00000157032	TRANSLATION	protein_coding	-	CCDS37512.1	-	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000024187	Fam234a	ENSMUST00000151293	ENSMUSP00000117020	TRANSLATION	protein_coding	stop	-	5	102	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024187	Fam234a	ENSMUST00000141240	ENSMUSP00000115724	TRANSLATION	protein_coding	-	-	5	549	4	0	0.5	0	1	-4,-5	-	-	4	ALTERNATIVE:2
ENSMUSG00000024187	Fam234a	ENSMUST00000114988	ENSMUSP00000110639	TRANSLATION	protein_coding	-	CCDS37512.1	1	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000024187	Fam234a	ENSMUST00000234687	ENSMUSP00000157219	TRANSLATION	protein_coding	-	CCDS37512.1	-	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000024187	Fam234a	ENSMUST00000153582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024187	Fam234a	ENSMUST00000118487	ENSMUSP00000113418	TRANSLATION	protein_coding	-	CCDS37512.1	1	555	4	0	1.5	0	1	-4,-5	-	-	4	PRINCIPAL:2
ENSMUSG00000046201	Scaf8	ENSMUST00000232048	ENSMUSP00000156084	TRANSLATION	protein_coding	stop	-	-	110	0	2.382	0	38	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046201	Scaf8	ENSMUST00000076734	ENSMUSP00000076024	TRANSLATION	protein_coding	-	CCDS49927.1	1	1268	0	4.98	6.3	97.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000046201	Scaf8	ENSMUST00000232079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058626	Capn11	ENSMUST00000120717	ENSMUSP00000113132	TRANSLATION	protein_coding	-	CCDS50121.1	1	714	16	15.81	1.5	575.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058626	Capn11	ENSMUST00000151350	ENSMUSP00000119679	TRANSLATION	non_stop_decay	-	-	3	174	0	1.75	0	46.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000091705	H2-Q2	ENSMUST00000074806	ENSMUSP00000078138	TRANSLATION	protein_coding	-	CCDS28696.1	1	360	0	5.48	0.5	380.9	1	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000091705	H2-Q2	ENSMUST00000173115	ENSMUSP00000133989	TRANSLATION	protein_coding	start	-	3	76	0	2.03	0	26	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000114752	ENSMUSP00000110400	TRANSLATION	protein_coding	-	CCDS50049.1	1	283	10	7.58	2.9	175.7	0	-4,-5	-	-	5.694	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000233095	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053436	Mapk14	ENSMUST00000151613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053436	Mapk14	ENSMUST00000114754	ENSMUSP00000110402	TRANSLATION	protein_coding	-	CCDS50049.1	1	283	10	7.58	2.9	175.7	0	-4,-5	-	-	5.694	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000114758	ENSMUSP00000110406	TRANSLATION	protein_coding	-	-	1	258	20	7.08	1.2	197.9	0	-4,-6	-	-	11.61	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000124886	ENSMUSP00000116914	TRANSLATION	protein_coding	stop	-	3	227	20	6.33	0	193.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000233811	ENSMUSP00000156603	TRANSLATION	nonsense_mediated_decay	-	-	-	50	7	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000004990	ENSMUSP00000004990	TRANSLATION	protein_coding	-	CCDS50048.1	1	360	20	9.58	17.3	221.9	0	-4,-6	-	-	22	ALTERNATIVE:1
ENSMUSG00000053436	Mapk14	ENSMUST00000233250	ENSMUSP00000156692	TRANSLATION	protein_coding	-	-	-	307	20	7.18	3.4	197.9	0	-4,-6	-	-	12.348	MINOR
ENSMUSG00000053436	Mapk14	ENSMUST00000062694	ENSMUSP00000061958	TRANSLATION	protein_coding	-	CCDS28583.1	1	360	20	9.58	17.3	220.6	0	-4,-6	-	-	21.922	PRINCIPAL:3
ENSMUSG00000024078	Ttc27	ENSMUST00000235123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024078	Ttc27	ENSMUST00000234264	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024078	Ttc27	ENSMUST00000234568	ENSMUSP00000157097	TRANSLATION	protein_coding	-	-	-	846	0	2.9	1.5	45	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024078	Ttc27	ENSMUST00000234558	ENSMUSP00000157317	TRANSLATION	protein_coding	start/stop	-	-	195	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024078	Ttc27	ENSMUST00000024882	ENSMUSP00000024882	TRANSLATION	protein_coding	-	CCDS28972.1	1	847	0	2.9	1.5	45	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000024078	Ttc27	ENSMUST00000234751	ENSMUSP00000157138	TRANSLATION	protein_coding	stop	-	-	164	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024078	Ttc27	ENSMUST00000234705	ENSMUSP00000157026	TRANSLATION	nonsense_mediated_decay	start	-	-	299	0	2.3	0	23.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024078	Ttc27	ENSMUST00000234628	ENSMUSP00000157215	TRANSLATION	protein_coding	start	-	-	274	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049561	Olfr95	ENSMUST00000060728	ENSMUSP00000058929	TRANSLATION	protein_coding	-	CCDS28739.1	-	312	0	0.42	7.6	193.3	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049561	Olfr95	ENSMUST00000216318	ENSMUSP00000150480	TRANSLATION	protein_coding	-	CCDS28739.1	5	312	0	0.42	7.6	193.3	5	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000007035	Msh5	ENSMUST00000174026	ENSMUSP00000134295	TRANSLATION	nonsense_mediated_decay	start	-	1	75	0	0.4	0	24.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007035	Msh5	ENSMUST00000174603	ENSMUSP00000134065	TRANSLATION	nonsense_mediated_decay	-	-	1	499	0	4.4014	0	106.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000007035	Msh5	ENSMUST00000097338	ENSMUSP00000094951	TRANSLATION	protein_coding	-	CCDS28674.1	1	833	12	10.2614	1.5	301.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000007035	Msh5	ENSMUST00000172536	ENSMUSP00000134426	TRANSLATION	nonsense_mediated_decay	-	-	1	616	11	6.2914	0	134.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000007035	Msh5	ENSMUST00000173124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007035	Msh5	ENSMUST00000173928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007035	Msh5	ENSMUST00000172491	ENSMUSP00000133415	TRANSLATION	nonsense_mediated_decay	-	-	3	67	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000007035	Msh5	ENSMUST00000174556	ENSMUSP00000134061	TRANSLATION	nonsense_mediated_decay	-	-	2	53	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000007035	Msh5	ENSMUST00000007250	ENSMUSP00000007250	TRANSLATION	protein_coding	-	CCDS28674.1	1	833	12	10.2614	1.5	301.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000007035	Msh5	ENSMUST00000174741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007035	Msh5	ENSMUST00000165329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007035	Msh5	ENSMUST00000173685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118135	Gm50367	ENSMUST00000235889	ENSMUSP00000158415	TRANSLATION	protein_coding,RT	-	-	-	153	0	1.5	0	0	0	-1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000091491	Vmn2r97	ENSMUST00000168710	ENSMUSP00000129313	TRANSLATION	protein_coding	-	CCDS49975.1	5	861	0	3.34	0.5	387.1	0	-2,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000091491	Vmn2r97	ENSMUST00000232219	ENSMUSP00000156141	TRANSLATION	protein_coding	-	-	-	567	0	2.86	0	182	0	-2,-7	-	-	5.04	MINOR
ENSMUSG00000091491	Vmn2r97	ENSMUST00000232325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042265	Trem1	ENSMUST00000048782	ENSMUSP00000038636	TRANSLATION	protein_coding	-	CCDS28860.1	1	230	0	1.58	1.5	57.1	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000042265	Trem1	ENSMUST00000113251	ENSMUSP00000108877	TRANSLATION	protein_coding	-	CCDS84319.1	1	111	0	0.58	0.5	0	1	2,-2	-	-	2.202	MINOR
ENSMUSG00000023991	Foxp4	ENSMUST00000113262	ENSMUSP00000108887	TRANSLATION	protein_coding	-	CCDS50136.1	1	673	4	5.4	1.5	213.7	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000023991	Foxp4	ENSMUST00000137039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023991	Foxp4	ENSMUST00000097311	ENSMUSP00000094916	TRANSLATION	protein_coding	-	CCDS50137.1	1	685	4	5.4	1.5	213.7	0	-4,-5	-	-	16	PRINCIPAL:4
ENSMUSG00000023991	Foxp4	ENSMUST00000153752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023991	Foxp4	ENSMUST00000136314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023991	Foxp4	ENSMUST00000113263	ENSMUSP00000108888	TRANSLATION	protein_coding	-	-	5	683	4	5.4	1.5	213.7	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000023991	Foxp4	ENSMUST00000113265	ENSMUSP00000108890	TRANSLATION	protein_coding	-	CCDS50135.1	1	672	4	5.4	1.5	213.7	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000023991	Foxp4	ENSMUST00000154108	ENSMUSP00000158631	TRANSLATION	protein_coding	stop	-	5	113	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024242	Map4k3	ENSMUST00000234133	ENSMUSP00000157308	TRANSLATION	protein_coding	-	-	-	873	19	11.1	8.8	445.1	0	-4,-5	-	-	19.5	MINOR
ENSMUSG00000024242	Map4k3	ENSMUST00000234585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024242	Map4k3	ENSMUST00000234481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024242	Map4k3	ENSMUST00000234486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024242	Map4k3	ENSMUST00000234200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024242	Map4k3	ENSMUST00000112389	ENSMUSP00000108008	TRANSLATION	protein_coding	-	-	5	896	19	11.85	8.8	441.4	0	-4,-5	-	-	20.778	ALTERNATIVE:1
ENSMUSG00000024242	Map4k3	ENSMUST00000234249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024242	Map4k3	ENSMUST00000025089	ENSMUSP00000025089	TRANSLATION	protein_coding	-	CCDS70847.1	5	894	19	11.85	8.8	445.1	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000071276	Fpr-rs7	ENSMUST00000095637	ENSMUSP00000093297	TRANSLATION	protein_coding	-	-	-	338	0	0.48	0.5	128.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034729	Mrps10	ENSMUST00000125963	ENSMUSP00000116184	TRANSLATION	protein_coding	stop	-	3	172	0	2.85	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000034729	Mrps10	ENSMUST00000136061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034729	Mrps10	ENSMUST00000120737	ENSMUSP00000113460	TRANSLATION	protein_coding	-	CCDS50130.1	1	200	0	6.1	5.3	85.7	0	-4,0	-	-	14	ALTERNATIVE:1
ENSMUSG00000034729	Mrps10	ENSMUST00000135418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034729	Mrps10	ENSMUST00000141699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034729	Mrps10	ENSMUST00000060752	ENSMUSP00000055301	TRANSLATION	protein_coding	-	CCDS28846.1	5	160	0	5	1.7	85.7	0	-4,-5	-	-	10.124	MINOR
ENSMUSG00000034729	Mrps10	ENSMUST00000143725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034729	Mrps10	ENSMUST00000119841	ENSMUSP00000112740	TRANSLATION	protein_coding	-	CCDS28846.1	1	160	0	5	1.7	85.7	0	-4,-5	-	-	10.124	MINOR
ENSMUSG00000034729	Mrps10	ENSMUST00000154039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034729	Mrps10	ENSMUST00000152497	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034729	Mrps10	ENSMUST00000119945	ENSMUSP00000113343	TRANSLATION	protein_coding	-	CCDS50129.1	1	201	0	6.1	5.3	85.7	0	-4,-1	-	-	14	PRINCIPAL:4
ENSMUSG00000045506	A930002H24Rik	ENSMUST00000050753	ENSMUSP00000060305	TRANSLATION	protein_coding	start	-	-	163	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000092417	Gpank1	ENSMUST00000165306	ENSMUSP00000133240	TRANSLATION	protein_coding	-	CCDS50084.1	1	349	0	0.64	2.7	76.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000092417	Gpank1	ENSMUST00000052167	ENSMUSP00000056646	TRANSLATION	protein_coding	-	CCDS28685.1	1	372	0	0.64	0.5	76.2	0	-2,-4	-	-	12	PRINCIPAL:3
ENSMUSG00000092417	Gpank1	ENSMUST00000173380	ENSMUSP00000134694	TRANSLATION	protein_coding	stop	-	5	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000092417	Gpank1	ENSMUST00000177018	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092417	Gpank1	ENSMUST00000173043	ENSMUSP00000135684	TRANSLATION	protein_coding	stop	-	1	201	0	0.64	0	27.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015461	Atf6b	ENSMUST00000173984	ENSMUSP00000133516	TRANSLATION	protein_coding	-	-	5	709	0	0.8	0.5	37.5	1	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000015461	Atf6b	ENSMUST00000174614	ENSMUSP00000133786	TRANSLATION	nonsense_mediated_decay	-	-	3	72	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015461	Atf6b	ENSMUST00000174156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015461	Atf6b	ENSMUST00000015605	ENSMUSP00000015605	TRANSLATION	protein_coding	-	CCDS28655.2	1	706	0	0.8	0.5	37.5	1	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000015461	Atf6b	ENSMUST00000174519	ENSMUSP00000133558	TRANSLATION	nonsense_mediated_decay	-	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023953	Polh	ENSMUST00000233924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023953	Polh	ENSMUST00000024749	ENSMUSP00000024749	TRANSLATION	protein_coding	-	CCDS28822.1	1	694	18	9.08	0.5	209.6	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000023953	Polh	ENSMUST00000233438	ENSMUSP00000156401	TRANSLATION	nonsense_mediated_decay	-	-	-	102	12	2.231	0	88.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024120	Lrpprc	ENSMUST00000160011	ENSMUSP00000123795	TRANSLATION	nonsense_mediated_decay	start	-	3	142	0	1.195	0	15.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024120	Lrpprc	ENSMUST00000112308	ENSMUSP00000107927	TRANSLATION	protein_coding	-	CCDS29003.2	1	1392	0	5.105	1.5	65	0	-1,1	-	-	12	PRINCIPAL:1
ENSMUSG00000024120	Lrpprc	ENSMUST00000161928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024120	Lrpprc	ENSMUST00000162799	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024120	Lrpprc	ENSMUST00000159222	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024120	Lrpprc	ENSMUST00000161299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024120	Lrpprc	ENSMUST00000160414	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052105	Mtcl1	ENSMUST00000145347	ENSMUSP00000121387	TRANSLATION	protein_coding	start	-	1	1496	0	0.2	0	361.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052105	Mtcl1	ENSMUST00000086693	ENSMUSP00000083899	TRANSLATION	protein_coding	-	CCDS28946.2	1	1945	0	1.3856	0.5	361.6	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000052105	Mtcl1	ENSMUST00000144492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052105	Mtcl1	ENSMUST00000142154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052105	Mtcl1	ENSMUST00000177034	ENSMUSP00000135690	TRANSLATION	protein_coding	-	-	5	1590	0	1.28	0	361.6	0	-4,-5	-	-	11.544	ALTERNATIVE:2
ENSMUSG00000052105	Mtcl1	ENSMUST00000129525	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052105	Mtcl1	ENSMUST00000097291	ENSMUSP00000094894	TRANSLATION	protein_coding	-	CCDS50168.1	1	1893	0	1.3856	0.5	361.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000052105	Mtcl1	ENSMUST00000134139	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052105	Mtcl1	ENSMUST00000129841	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052105	Mtcl1	ENSMUST00000127259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062202	Btbd9	ENSMUST00000237732	ENSMUSP00000158394	TRANSLATION	protein_coding	start	-	-	132	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000235587	ENSMUSP00000157721	TRANSLATION	protein_coding	-	-	-	391	3	0.74	0	76	0	-4,-7	-	-	4.38	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000235187	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000235643	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000235299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062202	Btbd9	ENSMUST00000237013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000237048	ENSMUSP00000157449	TRANSLATION	protein_coding	-	CCDS28599.1	-	612	3	3.05	7.5	240.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062202	Btbd9	ENSMUST00000237675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000236430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000168787	ENSMUSP00000127300	TRANSLATION	protein_coding	-	CCDS28599.1	1	612	3	3.05	7.5	240.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062202	Btbd9	ENSMUST00000235342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000236910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062202	Btbd9	ENSMUST00000235431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000236584	ENSMUSP00000157702	TRANSLATION	protein_coding	-	-	-	435	3	3.05	0	164.4	0	-4,-6	-	-	10.44	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000237164	ENSMUSP00000157439	TRANSLATION	protein_coding	start/stop	-	-	433	3	1.64	0	90.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000079924	ENSMUSP00000078845	TRANSLATION	protein_coding	-	CCDS28599.1	1	612	3	3.05	7.5	240.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062202	Btbd9	ENSMUST00000236799	ENSMUSP00000157534	TRANSLATION	protein_coding	-	-	-	385	3	3.05	1.7	164.4	0	-4,-6	-	-	10.764	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000237078	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000237635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000235555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000236233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000237037	ENSMUSP00000157719	TRANSLATION	protein_coding	stop	-	-	582	3	3.05	0	240.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000236825	ENSMUSP00000157736	TRANSLATION	protein_coding	stop	-	-	165	0	1.88	0	112.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062202	Btbd9	ENSMUST00000236153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062202	Btbd9	ENSMUST00000237825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042644	Itpr3	ENSMUST00000235521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042644	Itpr3	ENSMUST00000049308	ENSMUSP00000038150	TRANSLATION	protein_coding	-	CCDS28560.1	1	2670	8	45.425	6.3	952.5	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000015467	Egfl8	ENSMUST00000170850	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015467	Egfl8	ENSMUST00000097345	ENSMUSP00000094958	TRANSLATION	protein_coding	-	-	1	263	11	1.92	0	92.9	0	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000015467	Egfl8	ENSMUST00000015611	ENSMUSP00000015611	TRANSLATION	protein_coding	-	CCDS28651.1	1	293	11	1.92	2.7	92.9	0	0,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000015467	Egfl8	ENSMUST00000168353	ENSMUSP00000128433	TRANSLATION	protein_coding	stop	-	5	279	11	1.92	0	92.9	0	0,-3	-	-	-1	MINOR
ENSMUSG00000015467	Egfl8	ENSMUST00000166095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015467	Egfl8	ENSMUST00000168327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000237609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000236536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024194	Cuta	ENSMUST00000025027	ENSMUSP00000025027	TRANSLATION	protein_coding	-	CCDS28557.1	1	177	0	4.58	6.3	138.3	0	0,-4	-	-	14.445	PRINCIPAL:1
ENSMUSG00000024194	Cuta	ENSMUST00000114935	ENSMUSP00000110585	TRANSLATION	protein_coding	-	CCDS37519.1	1	154	0	3.75	7.5	138.3	0	2,-4	-	-	13.338	MINOR
ENSMUSG00000024194	Cuta	ENSMUST00000236744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000235460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000235341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000236326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000236906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000236623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024194	Cuta	ENSMUST00000235442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000235951	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024194	Cuta	ENSMUST00000236888	ENSMUSP00000158255	TRANSLATION	nonsense_mediated_decay	-	-	-	128	0	2.58	0	40.3	0	0,-4	-	-	-1	MINOR
ENSMUSG00000024018	Ccdc167	ENSMUST00000137079	ENSMUSP00000115603	TRANSLATION	nonsense_mediated_decay	-	-	3	54	0	0	0	47.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024018	Ccdc167	ENSMUST00000129091	ENSMUSP00000116591	TRANSLATION	protein_coding	-	CCDS50052.1	1	104	0	0	0.5	112.9	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000024018	Ccdc167	ENSMUST00000234438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024018	Ccdc167	ENSMUST00000128751	ENSMUSP00000123612	TRANSLATION	protein_coding	-	CCDS50051.1	1	97	0	0	3.9	112.9	0	-4,-5	-	-	7	ALTERNATIVE:2
ENSMUSG00000024018	Ccdc167	ENSMUST00000174437	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024018	Ccdc167	ENSMUST00000131807	ENSMUSP00000120238	TRANSLATION	nonsense_mediated_decay	start	-	3	50	0	0	0	47.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024018	Ccdc167	ENSMUST00000123502	ENSMUSP00000119013	TRANSLATION	nonsense_mediated_decay	-	-	1	96	0	0	3.9	104.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025431	Crisp1	ENSMUST00000026498	ENSMUSP00000026498	TRANSLATION	protein_coding	-	CCDS28784.1	1	244	2	6	0.5	139.6	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000037130	H2-M10.6	ENSMUST00000041398	ENSMUSP00000039908	TRANSLATION	protein_coding	-	CCDS28726.1	1	330	0	3.86	0.5	216.6	0	2,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000114245	Gm38655	ENSMUST00000224277	ENSMUSP00000153456	TRANSLATION	protein_coding	-	-	-	273	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000024319	Vps52	ENSMUST00000173196	ENSMUSP00000133926	TRANSLATION	protein_coding	stop	-	5	612	0	0	0	608.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024319	Vps52	ENSMUST00000234201	ENSMUSP00000157115	TRANSLATION	nonsense_mediated_decay	-	-	-	76	7	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024319	Vps52	ENSMUST00000173318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024319	Vps52	ENSMUST00000173445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024319	Vps52	ENSMUST00000025178	ENSMUSP00000025178	TRANSLATION	protein_coding	-	CCDS37574.1	1	723	0	0	5.1	763.4	0	-3,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000024319	Vps52	ENSMUST00000234673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024319	Vps52	ENSMUST00000172558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024184	Pdia2	ENSMUST00000148134	ENSMUSP00000116340	TRANSLATION	protein_coding	start	-	5	154	4	3.13	0	91.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024184	Pdia2	ENSMUST00000120333	ENSMUSP00000114080	TRANSLATION	protein_coding	-	-	1	524	8	9.86	0.5	294	0	2,-2	-	-	17.79	ALTERNATIVE:2
ENSMUSG00000024184	Pdia2	ENSMUST00000142410	ENSMUSP00000115267	TRANSLATION	protein_coding	start/stop	-	5	224	4	3.75	0	87.7	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024184	Pdia2	ENSMUST00000039113	ENSMUSP00000035584	TRANSLATION	protein_coding	-	CCDS37510.1	1	527	8	9.86	1.5	297.5	0	2,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000044477	Zfand3	ENSMUST00000234671	ENSMUSP00000157053	TRANSLATION	nonsense_mediated_decay	start	-	-	121	4	0	0	26.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044477	Zfand3	ENSMUST00000226421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000226308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000234902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000226208	ENSMUSP00000154782	TRANSLATION	protein_coding	-	-	-	227	12	2	8.8	59.5	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000044477	Zfand3	ENSMUST00000234866	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000234238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000234091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044477	Zfand3	ENSMUST00000057897	ENSMUSP00000063158	TRANSLATION	protein_coding	-	CCDS28598.1	1	205	12	2	4.2	59.5	0	-4,-5	-	-	19.23	MINOR
ENSMUSG00000044477	Zfand3	ENSMUST00000234790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045038	Prkce	ENSMUST00000097274	ENSMUSP00000094873	TRANSLATION	protein_coding	-	CCDS29008.1	1	737	24	10.43	8.8	421.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000045038	Prkce	ENSMUST00000150486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045038	Prkce	ENSMUST00000097275	ENSMUSP00000094874	TRANSLATION	protein_coding	-	CCDS29008.1	1	737	24	10.43	8.8	421.1	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000045038	Prkce	ENSMUST00000136986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045038	Prkce	ENSMUST00000142003	ENSMUSP00000138615	TRANSLATION	nonsense_mediated_decay	-	-	1	125	0	1	0	52.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024052	Lpin2	ENSMUST00000130750	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000149973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000129635	ENSMUSP00000119282	TRANSLATION	protein_coding	-	CCDS28956.1	1	893	7	0	3.9	612.4	0	-4,-6	-	-	13	PRINCIPAL:3
ENSMUSG00000024052	Lpin2	ENSMUST00000154507	ENSMUSP00000127035	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	0	0	60.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024052	Lpin2	ENSMUST00000140150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000126681	ENSMUSP00000118610	TRANSLATION	protein_coding	-	CCDS50177.1	1	931	7	0	3.9	612.4	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000024052	Lpin2	ENSMUST00000125665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000133156	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000135589	ENSMUSP00000115061	TRANSLATION	nonsense_mediated_decay	-	-	1	256	0	0	0	153.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024052	Lpin2	ENSMUST00000156570	ENSMUSP00000120634	TRANSLATION	protein_coding	-	-	1	459	0	0	0	153.9	0	-4,-6	-	-	0	MINOR
ENSMUSG00000024052	Lpin2	ENSMUST00000053173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000142842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024052	Lpin2	ENSMUST00000156565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041429	Nthl1	ENSMUST00000234635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041429	Nthl1	ENSMUST00000234308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041429	Nthl1	ENSMUST00000234260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041429	Nthl1	ENSMUST00000234888	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041429	Nthl1	ENSMUST00000047611	ENSMUSP00000047413	TRANSLATION	protein_coding	-	CCDS28487.1	1	300	13	3	1.5	122	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000094724	Rnaset2b	ENSMUST00000089119	ENSMUSP00000086519	TRANSLATION	protein_coding	-	CCDS37429.1	1	259	12	5.5	1.5	204.8	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000094724	Rnaset2b	ENSMUST00000232029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094724	Rnaset2b	ENSMUST00000232245	ENSMUSP00000156218	TRANSLATION	protein_coding	stop	-	-	163	9	3.75	0	142.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094724	Rnaset2b	ENSMUST00000231963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094724	Rnaset2b	ENSMUST00000179728	ENSMUSP00000137303	TRANSLATION	protein_coding	-	CCDS37429.1	1	259	12	5.5	1.5	204.8	1	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000094724	Rnaset2b	ENSMUST00000232304	ENSMUSP00000156329	TRANSLATION	protein_coding	-	-	-	163	9	3.75	1.2	136.6	0	-4,-7	-	-	8.412	MINOR
ENSMUSG00000094724	Rnaset2b	ENSMUST00000232106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073409	H2-Q6	ENSMUST00000113879	ENSMUSP00000109511	TRANSLATION	protein_coding	-	CCDS37598.1	2	326	0	4.3	0.5	362.7	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073409	H2-Q6	ENSMUST00000174699	ENSMUSP00000134550	TRANSLATION	protein_coding	-	CCDS37598.1	5	326	0	4.3	0.5	362.7	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000063239	Grm4	ENSMUST00000231416	ENSMUSP00000156277	TRANSLATION	protein_coding	-	-	-	657	8	6.41	0	456.8	8	-4,-5	-	-	0	MINOR
ENSMUSG00000063239	Grm4	ENSMUST00000231809	ENSMUSP00000156352	TRANSLATION	protein_coding	-	-	-	865	24	8.41	3.7	614.2	8	3,-1	-	-	16.551	MINOR
ENSMUSG00000063239	Grm4	ENSMUST00000118161	ENSMUSP00000113819	TRANSLATION	protein_coding	-	CCDS70775.1	5	912	24	9.41	7.6	625.5	8	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000063239	Grm4	ENSMUST00000147865	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063239	Grm4	ENSMUST00000146277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063239	Grm4	ENSMUST00000118489	ENSMUSP00000112578	TRANSLATION	protein_coding	-	CCDS28563.1	1	832	24	8.93	0.5	611.8	8	3,-1	-	-	16.218	MINOR
ENSMUSG00000063239	Grm4	ENSMUST00000232243	ENSMUSP00000156112	TRANSLATION	nonsense_mediated_decay	-	-	-	181	10	1	0	76.4	0	3,-1	-	-	-1	MINOR
ENSMUSG00000063239	Grm4	ENSMUST00000231290	ENSMUSP00000156001	TRANSLATION	protein_coding	-	CCDS70775.1	-	912	24	9.41	7.6	625.5	8	3,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000056910	Vmn2r107	ENSMUST00000233836	ENSMUSP00000156773	TRANSLATION	nonsense_mediated_decay	-	-	-	196	0	1.16	0	30.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056910	Vmn2r107	ENSMUST00000233421	ENSMUSP00000156595	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0.36	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000056910	Vmn2r107	ENSMUST00000042090	ENSMUSP00000048706	TRANSLATION	protein_coding	-	CCDS49984.1	5	861	0	3.32	0.5	388.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000093593	Gm20683	ENSMUST00000176751	ENSMUSP00000135410	TRANSLATION	nonsense_mediated_decay,RT	start	-	5	410	18	8.95	0	199.8	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000062619	2310039H08Rik	ENSMUST00000071430	ENSMUSP00000071378	TRANSLATION	protein_coding	-	CCDS28841.1	-	114	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000023935	Spats1	ENSMUST00000233583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023935	Spats1	ENSMUST00000233323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023935	Spats1	ENSMUST00000233553	ENSMUSP00000156716	TRANSLATION	protein_coding	-	-	-	327	0	0	0.5	455.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023935	Spats1	ENSMUST00000233769	ENSMUSP00000156469	TRANSLATION	protein_coding	-	-	-	306	0	0	0.5	356.9	0	-4,-5	-	-	0.108	MINOR
ENSMUSG00000023935	Spats1	ENSMUST00000024731	ENSMUSP00000024731	TRANSLATION	protein_coding	-	CCDS50118.1	1	269	0	0	0.5	455.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000094396	Vmn2r124	ENSMUST00000176802	ENSMUSP00000135613	TRANSLATION	protein_coding	-	CCDS70763.1	5	855	4	4.302	0.5	395.2	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000094396	Vmn2r124	ENSMUST00000233096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094396	Vmn2r124	ENSMUST00000233320	ENSMUSP00000156537	TRANSLATION	nonsense_mediated_decay	-	-	-	180	0	0.98	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000094396	Vmn2r124	ENSMUST00000231546	ENSMUSP00000155888	TRANSLATION	nonsense_mediated_decay	-	-	-	183	0	0.42	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234043	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234297	ENSMUSP00000157145	TRANSLATION	protein_coding	start	-	-	123	0	1.1	0	23.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000235089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059208	Hnrnpm	ENSMUST00000130946	ENSMUSP00000116671	TRANSLATION	protein_coding	start	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234474	ENSMUSP00000157373	TRANSLATION	protein_coding	start/stop	-	-	237	0	4.8	0	171.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000148178	ENSMUSP00000120115	TRANSLATION	protein_coding	-	CCDS37570.1	1	729	0	8.03	1.5	247.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000059208	Hnrnpm	ENSMUST00000148258	ENSMUSP00000123580	TRANSLATION	protein_coding	start/stop	-	3	243	0	3.13	0	55	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000127598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059208	Hnrnpm	ENSMUST00000139302	ENSMUSP00000115787	TRANSLATION	protein_coding	-	-	1	640	0	6.73	0	180.2	0	-4,-5	-	-	5.346	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059208	Hnrnpm	ENSMUST00000153608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059208	Hnrnpm	ENSMUST00000234099	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059208	Hnrnpm	ENSMUST00000114385	ENSMUSP00000110027	TRANSLATION	protein_coding	-	-	2	679	0	7.03	1	180.2	0	-4,-5	-	-	5.946	MINOR
ENSMUSG00000059208	Hnrnpm	ENSMUST00000087582	ENSMUSP00000084864	TRANSLATION	protein_coding	-	CCDS50068.1	1	690	0	7.73	1.5	247.8	0	-4,-5	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000023940	Sgo1	ENSMUST00000024736	ENSMUSP00000024736	TRANSLATION	protein_coding	-	CCDS28881.1	1	517	0	1	0.5	69.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023940	Sgo1	ENSMUST00000146019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023940	Sgo1	ENSMUST00000144474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079471	Mymx	ENSMUST00000178858	ENSMUSP00000137630	TRANSLATION	protein_coding	-	CCDS50119.1	1	84	0	0	1.7	0	0	-1,-1	-	-	0	PRINCIPAL:3
ENSMUSG00000079471	Mymx	ENSMUST00000113529	ENSMUSP00000109157	TRANSLATION	protein_coding	-	CCDS50119.1	2	84	0	0	1.7	0	0	-1,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000079471	Mymx	ENSMUST00000208801	ENSMUSP00000146823	TRANSLATION	protein_coding	-	CCDS50119.1	2	84	0	0	1.7	0	0	-1,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000079471	Mymx	ENSMUST00000169137	ENSMUSP00000126690	TRANSLATION	protein_coding	-	CCDS50120.1	2	108	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000064308	2410137M14Rik	ENSMUST00000039846	ENSMUSP00000044846	TRANSLATION	protein_coding	-	CCDS50104.1	1	162	0	1.6	0.5	48.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000064308	2410137M14Rik	ENSMUST00000173707	ENSMUSP00000133725	TRANSLATION	protein_coding	-	-	1	125	0	1.6	0	48.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071202	Ccdc78	ENSMUST00000095500	ENSMUSP00000093155	TRANSLATION	protein_coding	-	CCDS50035.1	5	437	0	0	0.5	70.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071202	Ccdc78	ENSMUST00000235405	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069743	Zfp820	ENSMUST00000232918	ENSMUSP00000156524	TRANSLATION	protein_coding	-	-	-	573	48	1.6	0	358.5	0	-4,-1	-	-	17.994	ALTERNATIVE:2
ENSMUSG00000069743	Zfp820	ENSMUST00000084141	ENSMUSP00000081158	TRANSLATION	protein_coding	-	CCDS49996.1	1	549	48	1.6	0.5	358.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000036983	Tfb1m	ENSMUST00000232051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036983	Tfb1m	ENSMUST00000232131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036983	Tfb1m	ENSMUST00000041003	ENSMUSP00000035291	TRANSLATION	protein_coding	-	CCDS28363.1	1	345	20	7	2.7	0	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037548	H2-DMb2	ENSMUST00000236519	ENSMUSP00000157952	TRANSLATION	protein_coding	-	-	-	130	0	1.6	0	79.6	1	-4,-7	-	-	2.598	MINOR
ENSMUSG00000037548	H2-DMb2	ENSMUST00000041982	ENSMUSP00000043526	TRANSLATION	protein_coding	-	CCDS37580.1	1	261	0	3.3	0.5	180.8	1	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000037548	H2-DMb2	ENSMUST00000171231	ENSMUSP00000126533	TRANSLATION	protein_coding	-	-	1	130	0	1.6	0	79.6	1	-4,-7	-	-	2.598	MINOR
ENSMUSG00000050612	Txndc2	ENSMUST00000050236	ENSMUSP00000054909	TRANSLATION	protein_coding	-	CCDS50165.1	1	550	3	0.2	0.5	78.5	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000050612	Txndc2	ENSMUST00000233702	ENSMUSP00000156697	TRANSLATION	protein_coding	-	-	-	543	3	0.2	0.5	78.5	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000024409	Psors1c2	ENSMUST00000025273	ENSMUSP00000025273	TRANSLATION	protein_coding	-	CCDS50091.1	1	135	0	0	5.1	178.3	0	3,-2	-	-	8	PRINCIPAL:1
ENSMUSG00000049672	Zbtb14	ENSMUST00000112676	ENSMUSP00000108296	TRANSLATION	protein_coding	-	CCDS37682.1	1	449	19	0.2	12.8	186.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000049672	Zbtb14	ENSMUST00000062369	ENSMUSP00000054897	TRANSLATION	protein_coding	-	CCDS37682.1	1	449	19	0.2	12.8	186.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000049672	Zbtb14	ENSMUST00000112674	ENSMUSP00000108294	TRANSLATION	protein_coding	-	CCDS37682.1	3	449	19	0.2	12.8	186.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000117338	Gm49804	ENSMUST00000233710	ENSMUSP00000156878	TRANSLATION	protein_coding,RT	-	-	-	287	11	6.5	1.2	222	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000023977	Ubr2	ENSMUST00000225599	ENSMUSP00000152895	TRANSLATION	nonsense_mediated_decay	-	-	-	178	11	2.15	0	78.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023977	Ubr2	ENSMUST00000225751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023977	Ubr2	ENSMUST00000113337	ENSMUSP00000108963	TRANSLATION	protein_coding	-	CCDS28845.1	1	1755	15	2.15	1.5	158.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000023977	Ubr2	ENSMUST00000113335	ENSMUSP00000108961	TRANSLATION	protein_coding	-	CCDS50127.1	1	1755	15	2.15	1.5	158.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000023977	Ubr2	ENSMUST00000223860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023977	Ubr2	ENSMUST00000225712	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023977	Ubr2	ENSMUST00000224759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023977	Ubr2	ENSMUST00000224442	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062464	Cyp4f37	ENSMUST00000077639	ENSMUSP00000076827	TRANSLATION	protein_coding	-	CCDS37558.1	1	546	30	8.05	0.5	451.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000062464	Cyp4f37	ENSMUST00000235101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039481	Nrtn	ENSMUST00000044752	ENSMUSP00000046512	TRANSLATION	protein_coding	-	CCDS28913.1	1	195	0	0.8	2.7	45.3	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000023802	Nox3	ENSMUST00000115800	ENSMUSP00000111466	TRANSLATION	protein_coding	-	CCDS28364.2	1	568	0	4	5.1	86	0	0,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000025733	Rhot2	ENSMUST00000176709	ENSMUSP00000135436	TRANSLATION	protein_coding	stop	-	5	121	14	3.028	0	53.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025733	Rhot2	ENSMUST00000176602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000177470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000176591	ENSMUSP00000135611	TRANSLATION	protein_coding	start/stop	-	3	172	18	4.06	0	55	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025733	Rhot2	ENSMUST00000176604	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000175790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000043897	ENSMUSP00000044639	TRANSLATION	protein_coding	-	CCDS37505.1	1	620	30	14.008	3.9	260.2	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000025733	Rhot2	ENSMUST00000177122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000177315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025733	Rhot2	ENSMUST00000176247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000176882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025733	Rhot2	ENSMUST00000176583	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000175869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025733	Rhot2	ENSMUST00000177347	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000176857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000176522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025733	Rhot2	ENSMUST00000177062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024213	Nudt3	ENSMUST00000176876	ENSMUSP00000135890	TRANSLATION	protein_coding	-	-	2	122	12	3.58	0	60.6	0	-4,-5	-	-	13.932	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000127236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024213	Nudt3	ENSMUST00000025050	ENSMUSP00000025050	TRANSLATION	protein_coding	-	CCDS28566.1	1	168	14	4.71	10.8	65.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024213	Nudt3	ENSMUST00000231742	ENSMUSP00000156111	TRANSLATION	protein_coding	-	-	-	139	14	3.71	1.7	59.7	0	-4,-5	-	-	15.657	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000062397	ENSMUSP00000059061	TRANSLATION	protein_coding	-	-	3	159	13	4.38	0	60	0	-4,-5	-	-	16.146	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000114886	ENSMUSP00000110536	TRANSLATION	protein_coding	-	CCDS70776.1	2	139	14	3.71	1.7	59.4	0	-4,-2	-	-	15.633	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000176458	ENSMUSP00000135175	TRANSLATION	protein_coding	stop	-	3	60	11	1.5	0	41.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000146321	ENSMUSP00000156367	TRANSLATION	protein_coding	-	-	2	77	9	2	0	50.1	0	-4,-5	-	-	7.812	MINOR
ENSMUSG00000024213	Nudt3	ENSMUST00000133048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024213	Nudt3	ENSMUST00000156429	ENSMUSP00000156024	TRANSLATION	protein_coding	-	-	3	116	7	3.21	0	32.3	0	-4,-5	-	-	7.278	MINOR
ENSMUSG00000057388	Mrpl18	ENSMUST00000162978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057388	Mrpl18	ENSMUST00000159765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057388	Mrpl18	ENSMUST00000162928	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057388	Mrpl18	ENSMUST00000079121	ENSMUSP00000078123	TRANSLATION	protein_coding	-	CCDS28396.1	1	180	0	3.25	3.9	0	0	-2,0	-	-	7	PRINCIPAL:1
ENSMUSG00000057388	Mrpl18	ENSMUST00000162781	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007034	Slc44a4	ENSMUST00000007249	ENSMUSP00000007249	TRANSLATION	protein_coding	-	CCDS37591.1	1	707	0	0	3.9	365.6	8	-4,-6	-	-	7	PRINCIPAL:2
ENSMUSG00000007034	Slc44a4	ENSMUST00000173664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007034	Slc44a4	ENSMUST00000169230	ENSMUSP00000132965	TRANSLATION	protein_coding	-	-	1	555	0	0	0	365.6	7	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033966	Cdkl4	ENSMUST00000086545	ENSMUSP00000083732	TRANSLATION	protein_coding	-	CCDS28992.1	1	342	18	6.8	6.3	275.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033966	Cdkl4	ENSMUST00000234349	ENSMUSP00000157316	TRANSLATION	protein_coding	-	CCDS28992.1	-	342	18	6.8	6.3	275.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000033966	Cdkl4	ENSMUST00000234602	ENSMUSP00000157063	TRANSLATION	protein_coding	-	CCDS28992.1	-	342	18	6.8	6.3	275.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000050933	Vmn1r231	ENSMUST00000238096	ENSMUSP00000157849	TRANSLATION	protein_coding	-	-	-	255	0	0	0	92.5	6	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000050933	Vmn1r231	ENSMUST00000061278	ENSMUSP00000056228	TRANSLATION	protein_coding	-	CCDS28430.1	-	311	0	0	1.5	90.7	8	-4,-5	-	-	5.886	PRINCIPAL:2
ENSMUSG00000050933	Vmn1r231	ENSMUST00000235948	ENSMUSP00000157578	TRANSLATION	protein_coding	-	CCDS28430.1	-	311	0	0	1.5	90.7	8	-4,-5	-	-	5.886	PRINCIPAL:2
ENSMUSG00000002664	Pspn	ENSMUST00000002740	ENSMUSP00000002740	TRANSLATION	protein_coding	-	CCDS28922.1	1	156	0	0.7	1.5	47.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000062101	Zfp119b	ENSMUST00000056147	ENSMUSP00000058300	TRANSLATION	protein_coding	-	CCDS37659.1	1	543	43	2.7	0.5	162	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000062101	Zfp119b	ENSMUST00000189452	ENSMUSP00000139791	TRANSLATION	protein_coding	-	CCDS79564.1	1	511	43	1.7	0.5	84.3	0	-4,-5	-	-	11.118	MINOR
ENSMUSG00000090417	Vmn2r94	ENSMUST00000231815	ENSMUSP00000156288	TRANSLATION	protein_coding	-	-	-	469	0	1.98	0	124.1	0	-4,-7	-	-	2.802	MINOR
ENSMUSG00000090417	Vmn2r94	ENSMUST00000172190	ENSMUSP00000126386	TRANSLATION	protein_coding	-	CCDS49971.1	5	818	4	3.58	0.5	379	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000090417	Vmn2r94	ENSMUST00000231390	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090417	Vmn2r94	ENSMUST00000231457	ENSMUSP00000155968	TRANSLATION	nonsense_mediated_decay	-	-	-	41	0	0.56	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052031	Tagap1	ENSMUST00000063683	ENSMUSP00000070466	TRANSLATION	protein_coding	-	CCDS49940.1	1	505	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000067144	Slc22a7	ENSMUST00000087012	ENSMUSP00000084234	TRANSLATION	protein_coding	-	CCDS28829.1	1	540	0	5.449	0.5	166.7	15	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000067144	Slc22a7	ENSMUST00000233715	ENSMUSP00000156640	TRANSLATION	protein_coding	-	-	-	416	0	5.289	0	162.4	15	-4,-6	-	-	11.424	ALTERNATIVE:2
ENSMUSG00000067144	Slc22a7	ENSMUST00000233575	ENSMUSP00000156887	TRANSLATION	protein_coding	stop	-	-	169	0	1.84	0	51.2	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000062327	T	ENSMUST00000136922	ENSMUSP00000119581	TRANSLATION	protein_coding	stop	-	5	137	1	2.5	0	172.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062327	T	ENSMUST00000177118	ENSMUSP00000135526	TRANSLATION	protein_coding	start/stop	-	5	253	0	2	0	100.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000062327	T	ENSMUST00000074667	ENSMUSP00000074236	TRANSLATION	protein_coding	-	CCDS28383.1	1	436	3	3.8	6.3	244.9	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000007050	Lsm2	ENSMUST00000007266	ENSMUSP00000007266	TRANSLATION	protein_coding	-	CCDS28671.1	1	131	5	2.91	1.5	61.4	0	-4,-7	-	-	17.136	MINOR
ENSMUSG00000007050	Lsm2	ENSMUST00000172890	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007050	Lsm2	ENSMUST00000172666	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007050	Lsm2	ENSMUST00000172777	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007050	Lsm2	ENSMUST00000174860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007050	Lsm2	ENSMUST00000174241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007050	Lsm2	ENSMUST00000174326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007050	Lsm2	ENSMUST00000174434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000007050	Lsm2	ENSMUST00000114011	ENSMUSP00000109644	TRANSLATION	protein_coding	-	CCDS50081.1	1	95	5	2.91	15.5	61.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000007050	Lsm2	ENSMUST00000173004	ENSMUSP00000134403	TRANSLATION	protein_coding	-	CCDS57069.1	1	85	0	0.75	0.5	0	0	-4,-2	-	-	1.548	MINOR
ENSMUSG00000007050	Lsm2	ENSMUST00000172523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047786	Lix1	ENSMUST00000140134	ENSMUSP00000156223	TRANSLATION	protein_coding	-	-	1	155	0	0	0.5	178.9	0	-4,-2	-	-	0	MINOR
ENSMUSG00000047786	Lix1	ENSMUST00000115576	ENSMUSP00000111239	TRANSLATION	protein_coding	-	CCDS37456.1	1	282	0	0	10.8	426.1	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000073412	Lst1	ENSMUST00000097336	ENSMUSP00000094949	TRANSLATION	protein_coding	-	CCDS50085.1	1	93	0	0	0.5	122.9	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000040688	Tbl3	ENSMUST00000149326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040688	Tbl3	ENSMUST00000126319	ENSMUSP00000120911	TRANSLATION	protein_coding	-	CCDS28493.1	1	801	0	9.614	1.7	321.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040688	Tbl3	ENSMUST00000046534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040688	Tbl3	ENSMUST00000142362	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040688	Tbl3	ENSMUST00000130633	ENSMUSP00000117818	TRANSLATION	protein_coding	start/stop	-	5	299	0	3.9828	0	188.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000092322	Esp36	ENSMUST00000177882	ENSMUSP00000136767	TRANSLATION	protein_coding	-	CCDS57083.1	1	117	0	0	0.5	107.6	0	0,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000092322	Esp36	ENSMUST00000172814	ENSMUSP00000134454	TRANSLATION	protein_coding	-	-	1	160	0	0	0.5	107.6	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000071068	Treml2	ENSMUST00000233496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071068	Treml2	ENSMUST00000233092	ENSMUSP00000156527	TRANSLATION	protein_coding	-	CCDS37646.1	-	329	0	0.48	0.5	31.7	1	3,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000071068	Treml2	ENSMUST00000170941	ENSMUSP00000128215	TRANSLATION	protein_coding	-	-	1	270	0	0.48	0.5	31.7	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000071068	Treml2	ENSMUST00000233602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091670	Vmn2r105	ENSMUST00000233461	ENSMUSP00000156971	TRANSLATION	protein_coding	-	-	-	858	4	4.55	0	401.1	11	-1,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000091670	Vmn2r105	ENSMUST00000233468	ENSMUSP00000156685	TRANSLATION	protein_coding	-	-	-	594	4	4.13	0	257.8	11	-1,-5	-	-	9.16	MINOR
ENSMUSG00000091670	Vmn2r105	ENSMUST00000232803	ENSMUSP00000156599	TRANSLATION	protein_coding	-	-	-	551	2	4.07	0	195.2	0	-1,-5	-	-	7.04	MINOR
ENSMUSG00000091670	Vmn2r105	ENSMUST00000167382	ENSMUSP00000129762	TRANSLATION	protein_coding	-	CCDS49982.1	5	860	4	4.45	0.5	401.1	11	-2,-5	-	-	15.802	PRINCIPAL:2
ENSMUSG00000091670	Vmn2r105	ENSMUST00000233950	ENSMUSP00000156902	TRANSLATION	protein_coding	-	-	-	826	4	3.99	0	395.9	11	-1,-5	-	-	14.566	MINOR
ENSMUSG00000091670	Vmn2r105	ENSMUST00000232877	ENSMUSP00000156813	TRANSLATION	protein_coding	-	-	-	828	4	3.99	0	395.9	11	-1,-5	-	-	14.566	MINOR
ENSMUSG00000091670	Vmn2r105	ENSMUST00000233786	ENSMUSP00000156857	TRANSLATION	protein_coding	-	-	-	564	2	4.07	0	196.4	0	-1,-5	-	-	7.04	MINOR
ENSMUSG00000091670	Vmn2r105	ENSMUST00000232768	ENSMUSP00000156604	TRANSLATION	protein_coding	-	-	-	564	4	3.57	0	257.8	11	-1,-5	-	-	8.038	MINOR
ENSMUSG00000024155	Meiob	ENSMUST00000234372	ENSMUSP00000157100	TRANSLATION	protein_coding	-	-	-	426	3	0	0	0	0	-4,-6	-	-	3	MINOR
ENSMUSG00000024155	Meiob	ENSMUST00000024972	ENSMUSP00000024972	TRANSLATION	protein_coding	-	CCDS50020.1	5	470	3	0	5.1	0	0	-4,-6	-	-	5	PRINCIPAL:1
ENSMUSG00000024155	Meiob	ENSMUST00000234455	ENSMUSP00000157038	TRANSLATION	nonsense_mediated_decay	-	-	-	344	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063888	Rpl7l1	ENSMUST00000233192	ENSMUSP00000156664	TRANSLATION	protein_coding	-	CCDS28842.1	-	246	0	0	1.7	113.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063888	Rpl7l1	ENSMUST00000078286	ENSMUSP00000092888	TRANSLATION	protein_coding	-	CCDS28842.1	1	246	0	0	1.7	113.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063888	Rpl7l1	ENSMUST00000233919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063888	Rpl7l1	ENSMUST00000233349	ENSMUSP00000156785	TRANSLATION	protein_coding	stop	-	-	83	0	0	0	48.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024245	Tmem178	ENSMUST00000025092	ENSMUSP00000025092	TRANSLATION	protein_coding	-	CCDS37705.1	1	297	0	0	7.5	67.7	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000023947	Nfkbie	ENSMUST00000233929	ENSMUSP00000156580	TRANSLATION	protein_coding	-	-	-	371	0	3.9	0.5	85.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000023947	Nfkbie	ENSMUST00000233379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023947	Nfkbie	ENSMUST00000024742	ENSMUSP00000024742	TRANSLATION	protein_coding	-	CCDS28811.1	1	364	0	3.75	1.5	85.1	0	-4,-5	-	-	11.7	PRINCIPAL:2
ENSMUSG00000034786	Gpsm3	ENSMUST00000173772	ENSMUSP00000134130	TRANSLATION	protein_coding	start	-	3	55	0	0	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034786	Gpsm3	ENSMUST00000150924	ENSMUSP00000134586	TRANSLATION	nonsense_mediated_decay	-	-	1	48	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034786	Gpsm3	ENSMUST00000038244	ENSMUSP00000045911	TRANSLATION	protein_coding	-	CCDS37589.1	1	159	0	0	5.1	62.6	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000001576	Ergic1	ENSMUST00000237902	ENSMUSP00000157890	TRANSLATION	nonsense_mediated_decay	-	-	-	46	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000236163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001576	Ergic1	ENSMUST00000235197	ENSMUSP00000158354	TRANSLATION	nonsense_mediated_decay	-	-	-	46	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000235653	ENSMUSP00000157704	TRANSLATION	nonsense_mediated_decay	-	-	-	46	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000165021	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001576	Ergic1	ENSMUST00000236642	ENSMUSP00000157805	TRANSLATION	nonsense_mediated_decay	-	-	-	138	0	0.2	0	123.2	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000170640	ENSMUSP00000126282	TRANSLATION	nonsense_mediated_decay	-	-	3	138	0	0.2	0	123.2	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000236481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001576	Ergic1	ENSMUST00000167662	ENSMUSP00000132922	TRANSLATION	protein_coding	-	CCDS28553.1	1	290	0	1.685	16	248.4	2	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000001576	Ergic1	ENSMUST00000235915	ENSMUSP00000158266	TRANSLATION	protein_coding	-	-	-	198	0	1.685	3.7	124	1	-4,-5	-	-	6.72	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000001619	ENSMUSP00000158222	TRANSLATION	protein_coding	stop	-	5	100	0	0.605	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000167070	ENSMUSP00000127158	TRANSLATION	protein_coding	-	-	3	191	0	1.685	0	94.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000163213	ENSMUSP00000158129	TRANSLATION	protein_coding	-	-	5	247	0	1.685	0	171.1	1	-4,-5	-	-	7.362	MINOR
ENSMUSG00000001576	Ergic1	ENSMUST00000165802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023939	Mrpl14	ENSMUST00000024734	ENSMUSP00000024734	TRANSLATION	protein_coding	-	CCDS28815.1	1	145	0	1.75	12.8	0	0	-2,2	-	-	10	PRINCIPAL:1
ENSMUSG00000023939	Mrpl14	ENSMUST00000149040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023939	Mrpl14	ENSMUST00000148537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023892	Zfp51	ENSMUST00000039577	ENSMUSP00000045684	TRANSLATION	protein_coding	-	CCDS37463.1	1	781	79	1.2	0.5	507.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000019579	Mydgf	ENSMUST00000140885	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019579	Mydgf	ENSMUST00000019723	ENSMUSP00000019723	TRANSLATION	protein_coding	-	CCDS28898.1	1	166	0	0	1.5	260.7	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000019579	Mydgf	ENSMUST00000151093	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059030	Olfr128	ENSMUST00000080231	ENSMUSP00000079121	TRANSLATION	protein_coding	-	CCDS28770.1	-	308	0	0.36	0.5	157.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059030	Olfr128	ENSMUST00000216440	ENSMUSP00000151065	TRANSLATION	protein_coding	-	CCDS28770.1	5	308	0	0.36	0.5	157.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059142	Zfp945	ENSMUST00000127557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059142	Zfp945	ENSMUST00000088696	ENSMUSP00000086074	TRANSLATION	protein_coding	-	CCDS50005.1	1	794	78	1.2	0.5	416.5	0	-4,-6	-	-	18	PRINCIPAL:4
ENSMUSG00000059142	Zfp945	ENSMUST00000160457	ENSMUSP00000124123	TRANSLATION	protein_coding	-	CCDS50004.1	1	773	78	1.2	0.5	416.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000059142	Zfp945	ENSMUST00000095615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024206	Rfx2	ENSMUST00000002444	ENSMUSP00000002444	TRANSLATION	protein_coding	-	CCDS50156.1	1	717	0	1.6	1.5	276.5	0	-4,-6	-	-	11.742	ALTERNATIVE:2
ENSMUSG00000024206	Rfx2	ENSMUST00000233624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024206	Rfx2	ENSMUST00000233000	ENSMUSP00000156913	TRANSLATION	protein_coding	stop	-	-	226	0	1.6	0	246.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024206	Rfx2	ENSMUST00000233643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024206	Rfx2	ENSMUST00000086801	ENSMUSP00000084010	TRANSLATION	protein_coding	-	CCDS28915.1	1	692	0	1.6	1.5	280.8	0	-4,-6	-	-	12	PRINCIPAL:3
ENSMUSG00000021545	1700067P10Rik	ENSMUST00000022028	ENSMUSP00000022028	TRANSLATION	protein_coding	-	-	1	183	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000021545	1700067P10Rik	ENSMUST00000233043	ENSMUSP00000156701	TRANSLATION	protein_coding	-	-	-	183	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024134	Six2	ENSMUST00000024947	ENSMUSP00000024947	TRANSLATION	protein_coding	-	CCDS29007.1	1	296	2	1	5.1	219.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000024134	Six2	ENSMUST00000163568	ENSMUSP00000125871	TRANSLATION	protein_coding	-	CCDS29007.1	1	296	2	1	5.1	219.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000058063	Trim31	ENSMUST00000078438	ENSMUSP00000077535	TRANSLATION	protein_coding	-	CCDS28728.1	1	507	13	3.22	1.5	121.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000023990	Tfeb	ENSMUST00000124765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023990	Tfeb	ENSMUST00000146782	ENSMUSP00000120311	TRANSLATION	protein_coding	start	-	5	334	0	2.37	0	184.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000140715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023990	Tfeb	ENSMUST00000141631	ENSMUSP00000118057	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	148.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000113284	ENSMUSP00000108909	TRANSLATION	protein_coding	-	-	5	267	0	1.37	0	259.1	0	-4,-7	-	-	3.468	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000086932	ENSMUSP00000084151	TRANSLATION	protein_coding	-	CCDS50133.1	1	475	0	2.37	3.9	409.5	0	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000023990	Tfeb	ENSMUST00000159641	ENSMUSP00000124379	TRANSLATION	protein_coding	stop	-	5	78	0	0	0	98.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000125177	ENSMUSP00000121888	TRANSLATION	protein_coding	stop	-	1	105	0	0	0	77.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000162719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023990	Tfeb	ENSMUST00000024786	ENSMUSP00000024786	TRANSLATION	protein_coding	-	CCDS28856.1	1	534	0	2.37	1.5	409.5	0	-4,-5	-	-	12.172	PRINCIPAL:3
ENSMUSG00000023990	Tfeb	ENSMUST00000137845	ENSMUSP00000119508	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	35.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000113288	ENSMUSP00000108913	TRANSLATION	protein_coding	-	CCDS50133.1	1	475	0	2.37	3.9	409.5	0	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000023990	Tfeb	ENSMUST00000126258	ENSMUSP00000119442	TRANSLATION	protein_coding	stop	-	5	32	0	0	0	35.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000160373	ENSMUSP00000124708	TRANSLATION	protein_coding	stop	-	5	77	0	0	0	95.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023990	Tfeb	ENSMUST00000130208	ENSMUSP00000122228	TRANSLATION	protein_coding	stop	-	3	76	0	0	0	92.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000023873	1700010I14Rik	ENSMUST00000232775	ENSMUSP00000156573	TRANSLATION	protein_coding	-	-	-	399	0	0	0	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023873	1700010I14Rik	ENSMUST00000136954	ENSMUSP00000156639	TRANSLATION	protein_coding	stop	-	2	355	0	0	0	113.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023873	1700010I14Rik	ENSMUST00000233654	ENSMUSP00000156914	TRANSLATION	nonsense_mediated_decay	start	-	-	512	0	0	0	113.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023873	1700010I14Rik	ENSMUST00000024650	ENSMUSP00000024650	TRANSLATION	protein_coding	-	CCDS84275.1	1	532	0	0	0.5	113.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023873	1700010I14Rik	ENSMUST00000151609	ENSMUSP00000118841	TRANSLATION	protein_coding	-	CCDS28385.2	1	493	0	0	0.5	113.9	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000091586	Cyp4f17	ENSMUST00000165999	ENSMUSP00000129514	TRANSLATION	protein_coding	-	CCDS50059.1	5	524	30	7.97	2.7	446.1	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000091586	Cyp4f17	ENSMUST00000236129	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091586	Cyp4f17	ENSMUST00000235238	ENSMUSP00000157831	TRANSLATION	protein_coding	stop	-	-	177	5	1.8	0	58.8	0	1,-2	-	-	-1	MINOR
ENSMUSG00000091586	Cyp4f17	ENSMUST00000237003	ENSMUSP00000157447	TRANSLATION	protein_coding	-	CCDS50059.1	-	524	30	7.97	2.7	446.1	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060245	Vmn1r228	ENSMUST00000232812	ENSMUSP00000156530	TRANSLATION	protein_coding	-	CCDS28427.1	-	333	0	0	0.5	87.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060245	Vmn1r228	ENSMUST00000233164	ENSMUSP00000156930	TRANSLATION	protein_coding	-	CCDS28427.1	-	333	0	0	0.5	87.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060245	Vmn1r228	ENSMUST00000233605	ENSMUSP00000156620	TRANSLATION	protein_coding	-	CCDS28427.1	-	333	0	0	0.5	87.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060245	Vmn1r228	ENSMUST00000072410	ENSMUSP00000072243	TRANSLATION	protein_coding	-	CCDS28427.1	-	333	0	0	0.5	87.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000060245	Vmn1r228	ENSMUST00000233186	ENSMUSP00000156690	TRANSLATION	protein_coding	-	CCDS28427.1	-	333	0	0	0.5	87.7	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041319	Thoc6	ENSMUST00000115489	ENSMUSP00000111152	TRANSLATION	protein_coding	-	-	5	337	2	4.985	0	23.8	0	-4,-2	-	-	14	MINOR
ENSMUSG00000041319	Thoc6	ENSMUST00000095579	ENSMUSP00000093239	TRANSLATION	protein_coding	-	CCDS28454.1	1	341	2	4.985	7.5	23.8	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000041319	Thoc6	ENSMUST00000115490	ENSMUSP00000111153	TRANSLATION	protein_coding	-	CCDS28454.1	5	341	2	4.985	7.5	23.8	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000041319	Thoc6	ENSMUST00000125443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041319	Thoc6	ENSMUST00000135259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041319	Thoc6	ENSMUST00000133849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041319	Thoc6	ENSMUST00000047436	ENSMUSP00000038137	TRANSLATION	protein_coding	-	CCDS28454.1	1	341	2	4.985	7.5	23.8	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000093957	Esp3	ENSMUST00000177574	ENSMUSP00000136597	TRANSLATION	protein_coding	-	CCDS57094.1	1	87	0	0	0.5	83.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000116988	Gm49673	ENSMUST00000232307	ENSMUSP00000156372	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	259	11	5.75	1.5	204.8	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000071275	Fpr-rs6	ENSMUST00000095636	ENSMUSP00000093296	TRANSLATION	protein_coding	-	CCDS28423.1	-	339	0	0.56	0.5	126.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024212	Mllt1	ENSMUST00000233063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024212	Mllt1	ENSMUST00000233829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024212	Mllt1	ENSMUST00000025053	ENSMUSP00000025053	TRANSLATION	protein_coding	-	CCDS28918.1	1	547	0	5.4	1.5	88.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024212	Mllt1	ENSMUST00000233854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023809	Rps6ka2	ENSMUST00000232527	ENSMUSP00000156179	TRANSLATION	protein_coding	start	-	-	223	21	5.816	0	203	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023809	Rps6ka2	ENSMUST00000231530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023809	Rps6ka2	ENSMUST00000232617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023809	Rps6ka2	ENSMUST00000024575	ENSMUSP00000024575	TRANSLATION	protein_coding	-	CCDS28376.1	1	733	39	17.6	12.4	522.2	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000023809	Rps6ka2	ENSMUST00000232136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034681	Rnps1	ENSMUST00000234089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034681	Rnps1	ENSMUST00000234342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000163717	ENSMUSP00000126345	TRANSLATION	protein_coding	-	CCDS37488.1	5	305	3	2.8	7.5	64.6	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000034681	Rnps1	ENSMUST00000234154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000088512	ENSMUSP00000085867	TRANSLATION	protein_coding	-	CCDS37488.1	1	305	3	2.8	7.5	64.6	0	-4,-5	-	-	18	PRINCIPAL:4
ENSMUSG00000034681	Rnps1	ENSMUST00000115371	ENSMUSP00000111028	TRANSLATION	protein_coding	-	CCDS37487.1	1	282	3	2.8	7.5	64.6	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000034681	Rnps1	ENSMUST00000234630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000234729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000234233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000234832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034681	Rnps1	ENSMUST00000234977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039154	Shd	ENSMUST00000223629	ENSMUSP00000153605	TRANSLATION	protein_coding	-	CCDS50149.1	-	344	0	1.82	1.5	52.1	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000039154	Shd	ENSMUST00000223687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039154	Shd	ENSMUST00000224021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039154	Shd	ENSMUST00000225145	ENSMUSP00000153663	TRANSLATION	protein_coding	-	-	-	124	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000039154	Shd	ENSMUST00000223841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039154	Shd	ENSMUST00000233858	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039154	Shd	ENSMUST00000044216	ENSMUSP00000047656	TRANSLATION	protein_coding	-	-	1	343	0	1.82	1.5	52.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000048731	Ggnbp1	ENSMUST00000236222	ENSMUSP00000157530	TRANSLATION	protein_coding	-	-	-	137	0	1.24	0	150.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000048731	Ggnbp1	ENSMUST00000235543	ENSMUSP00000158352	TRANSLATION	protein_coding	start	-	-	134	0	0.84	0	119	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048731	Ggnbp1	ENSMUST00000122106	ENSMUSP00000113880	TRANSLATION	protein_coding	-	CCDS57061.1	5	262	0	1.24	0.5	150.8	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000048731	Ggnbp1	ENSMUST00000154731	ENSMUSP00000157923	TRANSLATION	protein_coding	-	-	2	137	0	1.24	0	150.8	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000048731	Ggnbp1	ENSMUST00000053683	ENSMUSP00000051800	TRANSLATION	protein_coding	-	CCDS28559.1	1	370	0	1.24	1.5	150.8	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000048731	Ggnbp1	ENSMUST00000235268	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048731	Ggnbp1	ENSMUST00000236076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048731	Ggnbp1	ENSMUST00000151920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048731	Ggnbp1	ENSMUST00000142141	ENSMUSP00000157820	TRANSLATION	protein_coding	-	-	2	31	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000154363	ENSMUSP00000114672	TRANSLATION	protein_coding	stop	-	3	123	3	2.2	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000169200	ENSMUSP00000126514	TRANSLATION	protein_coding	stop	-	5	237	15	6.03	0	97.9	0	-3,1	-	-	-1	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000164251	ENSMUSP00000129904	TRANSLATION	protein_coding	stop	-	5	217	14	6.5	0	85.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000130989	ENSMUSP00000120734	TRANSLATION	protein_coding	stop	-	3	167	11	5	0	35.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000163132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024158	Hagh	ENSMUST00000149716	ENSMUSP00000114838	TRANSLATION	protein_coding	stop	-	5	132	5	4	0	33.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024158	Hagh	ENSMUST00000024974	ENSMUSP00000024974	TRANSLATION	protein_coding	-	CCDS50021.1	5	260	18	7.83	16.1	137.2	0	-4,-5	-	-	20.434	ALTERNATIVE:1
ENSMUSG00000024158	Hagh	ENSMUST00000118788	ENSMUSP00000113051	TRANSLATION	protein_coding	-	CCDS28499.2	1	309	19	8.28	7.5	137.2	0	-3,1	-	-	19.72	PRINCIPAL:3
ENSMUSG00000050138	Kcnk12	ENSMUST00000055221	ENSMUSP00000053595	TRANSLATION	protein_coding	-	CCDS29020.1	1	430	0	0.88	6.3	112.4	0	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000024081	Cebpz	ENSMUST00000233371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024081	Cebpz	ENSMUST00000232899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024081	Cebpz	ENSMUST00000233484	ENSMUSP00000156479	TRANSLATION	nonsense_mediated_decay	-	-	-	461	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024081	Cebpz	ENSMUST00000024885	ENSMUSP00000024885	TRANSLATION	protein_coding	-	CCDS28981.1	1	1052	0	0	0.5	190.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024081	Cebpz	ENSMUST00000233595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024246	Thumpd2	ENSMUST00000234801	ENSMUSP00000157154	TRANSLATION	nonsense_mediated_decay	-	-	-	506	18	3.44	0	108.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024246	Thumpd2	ENSMUST00000025093	ENSMUSP00000025093	TRANSLATION	protein_coding	-	CCDS50190.1	1	528	18	3.28	0.5	115.1	0	-4,-6	-	-	17.682	PRINCIPAL:1
ENSMUSG00000007030	Vwa7	ENSMUST00000172499	ENSMUSP00000133418	TRANSLATION	protein_coding	-	CCDS84299.1	1	870	6	0	0.5	0	0	2,-1	-	-	5.142	ALTERNATIVE:2
ENSMUSG00000007030	Vwa7	ENSMUST00000007245	ENSMUSP00000007245	TRANSLATION	protein_coding	-	CCDS28672.1	1	891	7	0	1.5	0	0	2,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000024063	Lbh	ENSMUST00000148556	ENSMUSP00000123062	TRANSLATION	nonsense_mediated_decay	start	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024063	Lbh	ENSMUST00000024857	ENSMUSP00000024857	TRANSLATION	protein_coding	-	CCDS28964.1	1	105	0	0	11.7	102.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000047407	Tgif1	ENSMUST00000125329	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047407	Tgif1	ENSMUST00000135007	ENSMUSP00000124168	TRANSLATION	protein_coding	stop	-	2	158	0	1.93	0	63.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000059775	ENSMUSP00000060512	TRANSLATION	protein_coding	-	CCDS37683.1	1	272	0	1.93	7.8	63.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000047407	Tgif1	ENSMUST00000132825	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047407	Tgif1	ENSMUST00000127719	ENSMUSP00000115375	TRANSLATION	protein_coding	stop	-	3	242	0	1.93	0	63.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000166395	ENSMUSP00000130930	TRANSLATION	protein_coding	-	CCDS50175.1	1	305	0	1.93	0.5	63.6	0	-4,-2	-	-	12	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000190687	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047407	Tgif1	ENSMUST00000118283	ENSMUSP00000113192	TRANSLATION	protein_coding	-	CCDS50174.1	1	252	0	1.93	5.3	63.6	0	-4,-2	-	-	13.896	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000186358	ENSMUSP00000139438	TRANSLATION	protein_coding	-	-	3	84	0	1	0	33.4	0	-4,-5	-	-	6.258	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000134654	ENSMUSP00000125247	TRANSLATION	protein_coding	stop	-	3	58	0	1	0	30	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000156484	ENSMUSP00000124970	TRANSLATION	protein_coding	start	-	2	57	0	1	0	33.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000047407	Tgif1	ENSMUST00000172229	ENSMUSP00000127139	TRANSLATION	protein_coding	-	CCDS50174.1	3	252	0	1.93	5.3	63.6	0	-4,-2	-	-	13.896	MINOR
ENSMUSG00000040899	Ccr6	ENSMUST00000177568	ENSMUSP00000137249	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000167956	ENSMUSP00000128529	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000180103	ENSMUSP00000135945	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000166348	ENSMUSP00000128559	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000164411	ENSMUSP00000131153	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000097418	ENSMUSP00000095029	TRANSLATION	protein_coding	-	CCDS28381.1	1	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040899	Ccr6	ENSMUST00000232412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040899	Ccr6	ENSMUST00000231340	ENSMUSP00000156247	TRANSLATION	protein_coding	stop	-	-	48	0	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040899	Ccr6	ENSMUST00000231545	ENSMUSP00000156324	TRANSLATION	protein_coding	-	CCDS28381.1	-	367	0	1.22	2.7	164.3	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069135	Fgfr1op	ENSMUST00000097419	ENSMUSP00000095030	TRANSLATION	protein_coding	-	CCDS57045.1	1	399	0	2.25	4.1	99.3	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000069135	Fgfr1op	ENSMUST00000161898	ENSMUSP00000123855	TRANSLATION	protein_coding	start	-	3	151	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069135	Fgfr1op	ENSMUST00000162586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069135	Fgfr1op	ENSMUST00000024636	ENSMUSP00000024636	TRANSLATION	protein_coding	-	CCDS28380.1	1	379	0	2.25	2.9	99.3	0	-4,-5	-	-	12.613	PRINCIPAL:3
ENSMUSG00000024201	Kdm4b	ENSMUST00000132363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024201	Kdm4b	ENSMUST00000139679	ENSMUSP00000118089	TRANSLATION	protein_coding	stop	-	3	208	8	4	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024201	Kdm4b	ENSMUST00000025036	ENSMUSP00000025036	TRANSLATION	protein_coding	-	CCDS28904.1	1	1086	23	13.76	0.5	378.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024201	Kdm4b	ENSMUST00000147489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024201	Kdm4b	ENSMUST00000141507	ENSMUSP00000116789	TRANSLATION	protein_coding	start	-	1	544	8	6.26	0	180.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024201	Kdm4b	ENSMUST00000086835	ENSMUSP00000084045	TRANSLATION	protein_coding	-	-	5	1021	23	12.26	0	378.6	0	-4,-5	-	-	15	MINOR
ENSMUSG00000024393	Prrc2a	ENSMUST00000173558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024393	Prrc2a	ENSMUST00000025253	ENSMUSP00000025253	TRANSLATION	protein_coding	-	CCDS37596.1	1	2158	0	0	0.5	240.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024393	Prrc2a	ENSMUST00000174805	ENSMUSP00000133550	TRANSLATION	protein_coding	-	-	1	2069	0	0	0	128.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024393	Prrc2a	ENSMUST00000174386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024393	Prrc2a	ENSMUST00000172899	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024393	Prrc2a	ENSMUST00000172929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037095	Lrg1	ENSMUST00000041357	ENSMUSP00000038048	TRANSLATION	protein_coding	-	CCDS28895.1	1	342	0	0.64	0.5	111.2	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000033597	Caskin1	ENSMUST00000024958	ENSMUSP00000024958	TRANSLATION	protein_coding	-	CCDS50013.1	5	1431	0	10.96	1.5	566.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000033597	Caskin1	ENSMUST00000235032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033597	Caskin1	ENSMUST00000234717	ENSMUSP00000157196	TRANSLATION	protein_coding	-	-	-	1360	0	8.96	1.5	510	0	-4,-5	-	-	4.632	MINOR
ENSMUSG00000033597	Caskin1	ENSMUST00000234171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033597	Caskin1	ENSMUST00000234030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014426	Map3k4	ENSMUST00000232931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014426	Map3k4	ENSMUST00000089058	ENSMUSP00000086459	TRANSLATION	protein_coding	-	CCDS37435.1	1	1597	20	5.382	1.5	230.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000014426	Map3k4	ENSMUST00000233755	ENSMUSP00000156730	TRANSLATION	protein_coding	-	-	-	1545	20	5.382	1.5	230.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000014426	Map3k4	ENSMUST00000232689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014426	Map3k4	ENSMUST00000233716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014426	Map3k4	ENSMUST00000233683	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014426	Map3k4	ENSMUST00000233012	ENSMUSP00000156490	TRANSLATION	protein_coding	stop	-	-	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014426	Map3k4	ENSMUST00000233002	ENSMUSP00000156645	TRANSLATION	protein_coding	stop	-	-	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000014426	Map3k4	ENSMUST00000233252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092342	Esp31	ENSMUST00000174742	ENSMUSP00000133965	TRANSLATION	protein_coding	-	CCDS57085.1	1	114	0	0	0.5	34.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000015127	Unkl	ENSMUST00000161679	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015127	Unkl	ENSMUST00000162498	ENSMUSP00000124530	TRANSLATION	protein_coding	stop	-	3	108	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015127	Unkl	ENSMUST00000160896	ENSMUSP00000124276	TRANSLATION	protein_coding	-	CCDS70769.1	1	541	20	4.5	1.5	57.5	0	-4,-5	-	-	6.498	MINOR
ENSMUSG00000015127	Unkl	ENSMUST00000039734	ENSMUSP00000039670	TRANSLATION	protein_coding	-	CCDS57058.1	5	727	31	7.25	1.5	57.5	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000015127	Unkl	ENSMUST00000160785	ENSMUSP00000124121	TRANSLATION	nonsense_mediated_decay	start	-	3	134	11	2	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015127	Unkl	ENSMUST00000015271	ENSMUSP00000015271	TRANSLATION	protein_coding	-	CCDS28510.1	1	239	8	1	1.5	33.4	0	-4,-5	-	-	3.486	MINOR
ENSMUSG00000015127	Unkl	ENSMUST00000162838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055760	Gemin6	ENSMUST00000156869	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055760	Gemin6	ENSMUST00000069486	ENSMUSP00000063554	TRANSLATION	protein_coding	-	CCDS28989.1	1	166	0	1.6	7.5	325.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000035678	Tnfsf9	ENSMUST00000039490	ENSMUSP00000040412	TRANSLATION	protein_coding	-	CCDS28926.1	1	309	0	0.84	0.5	85.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036552	Ermard	ENSMUST00000226464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036552	Ermard	ENSMUST00000228518	ENSMUSP00000153913	TRANSLATION	protein_coding	stop	-	-	82	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000227786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036552	Ermard	ENSMUST00000231241	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036552	Ermard	ENSMUST00000226561	ENSMUSP00000154292	TRANSLATION	protein_coding	-	-	-	170	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000226488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036552	Ermard	ENSMUST00000227548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036552	Ermard	ENSMUST00000097393	ENSMUSP00000095005	TRANSLATION	protein_coding	-	CCDS37451.1	1	622	0	0	0.5	82.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036552	Ermard	ENSMUST00000226384	ENSMUSP00000154263	TRANSLATION	nonsense_mediated_decay	start	-	-	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000186130	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036552	Ermard	ENSMUST00000231568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036552	Ermard	ENSMUST00000227177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036552	Ermard	ENSMUST00000228803	ENSMUSP00000154319	TRANSLATION	protein_coding	start	-	-	268	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000226213	ENSMUSP00000153950	TRANSLATION	protein_coding	stop	-	-	211	0	0	0	37.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000226599	ENSMUSP00000154498	TRANSLATION	protein_coding	-	-	-	175	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000187199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036552	Ermard	ENSMUST00000227252	ENSMUSP00000154126	TRANSLATION	nonsense_mediated_decay	start	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036552	Ermard	ENSMUST00000227545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091076	Vmn2r115	ENSMUST00000168175	ENSMUSP00000131447	TRANSLATION	protein_coding	-	CCDS50008.1	1	857	4	3.28	0.5	363.4	0	4,-1	-	-	16	PRINCIPAL:1
ENSMUSG00000091076	Vmn2r115	ENSMUST00000234552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091076	Vmn2r115	ENSMUST00000234796	ENSMUSP00000157377	TRANSLATION	protein_coding	-	-	-	550	0	1.2	0	102.6	0	4,-1	-	-	1.842	MINOR
ENSMUSG00000007021	Syngr3	ENSMUST00000130936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007021	Syngr3	ENSMUST00000007236	ENSMUSP00000007236	TRANSLATION	protein_coding	-	CCDS28491.1	1	229	0	0	8.3	86	0	-4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000036185	Sapcd1	ENSMUST00000173211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036185	Sapcd1	ENSMUST00000174117	ENSMUSP00000134423	TRANSLATION	nonsense_mediated_decay	-	-	1	96	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036185	Sapcd1	ENSMUST00000040151	ENSMUSP00000047448	TRANSLATION	protein_coding	-	CCDS37594.1	1	146	0	0	1.5	87.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000036185	Sapcd1	ENSMUST00000174037	ENSMUSP00000133881	TRANSLATION	nonsense_mediated_decay	-	-	2	96	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000040140	Tdrd6	ENSMUST00000168073	ENSMUSP00000131277	TRANSLATION	protein_coding	-	CCDS28797.1	1	2134	14	0.6	0.5	480.8	0	-4,-7	-	-	18	PRINCIPAL:3
ENSMUSG00000040140	Tdrd6	ENSMUST00000233077	ENSMUSP00000156656	TRANSLATION	protein_coding	-	-	-	1941	14	0	0.5	403.4	0	-4,-7	-	-	7.356	MINOR
ENSMUSG00000040140	Tdrd6	ENSMUST00000162232	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040140	Tdrd6	ENSMUST00000045717	ENSMUSP00000035338	TRANSLATION	protein_coding	-	CCDS50115.1	1	2135	14	0.6	0.5	480.8	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000062480	Acat3	ENSMUST00000160921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062480	Acat3	ENSMUST00000160378	ENSMUSP00000125454	TRANSLATION	protein_coding	-	CCDS28398.1	5	397	20	8.5	13.5	484.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000062480	Acat3	ENSMUST00000043923	ENSMUSP00000045912	TRANSLATION	protein_coding	-	CCDS28398.1	1	397	20	8.5	13.5	484.7	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024055	Cyp4f13	ENSMUST00000139353	ENSMUSP00000123282	TRANSLATION	protein_coding	-	-	1	414	30	7.38	0	354.5	2	1,-2	-	-	6.24	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000141325	ENSMUSP00000117168	TRANSLATION	nonsense_mediated_decay	-	-	3	118	5	0.84	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000145683	ENSMUSP00000118919	TRANSLATION	nonsense_mediated_decay	-	-	5	87	5	0.24	0	0	2	1,-2	-	-	-1	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000146718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024055	Cyp4f13	ENSMUST00000235098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024055	Cyp4f13	ENSMUST00000123653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024055	Cyp4f13	ENSMUST00000137222	ENSMUSP00000123495	TRANSLATION	nonsense_mediated_decay	-	-	5	115	5	0.84	0	0	2	2,-2	-	-	-1	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234946	ENSMUSP00000157120	TRANSLATION	nonsense_mediated_decay	-	-	-	73	5	0.24	0	0	2	1,-2	-	-	-1	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234683	ENSMUSP00000157210	TRANSLATION	nonsense_mediated_decay	-	-	-	73	5	0.24	0	0	2	1,-2	-	-	-1	MINOR
ENSMUSG00000024055	Cyp4f13	ENSMUST00000075253	ENSMUSP00000074733	TRANSLATION	protein_coding	-	CCDS28622.1	1	523	35	9.31	1.7	430.6	2	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024055	Cyp4f13	ENSMUST00000234083	ENSMUSP00000157023	TRANSLATION	protein_coding	stop	-	-	216	6	3.37	0	120.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002661	Alkbh7	ENSMUST00000002737	ENSMUSP00000002737	TRANSLATION	protein_coding	-	CCDS28921.1	1	221	3	4	6.3	0	0	0,3	-	-	11	PRINCIPAL:1
ENSMUSG00000002661	Alkbh7	ENSMUST00000149632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002661	Alkbh7	ENSMUST00000074141	ENSMUSP00000073775	TRANSLATION	protein_coding	-	CCDS57105.1	1	163	1	3	0.5	0	0	0,3	-	-	5.001	MINOR
ENSMUSG00000095961	Vmn2r102	ENSMUST00000171741	ENSMUSP00000126559	TRANSLATION	protein_coding	-	CCDS49979.1	5	857	0	3.22	1.5	400.1	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000023967	Mrps18a	ENSMUST00000024763	ENSMUSP00000024763	TRANSLATION	protein_coding	-	CCDS28819.1	1	196	0	5.08	7.6	60.1	0	-2,2	-	-	15	PRINCIPAL:1
ENSMUSG00000023967	Mrps18a	ENSMUST00000134237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023967	Mrps18a	ENSMUST00000147672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023967	Mrps18a	ENSMUST00000131943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023967	Mrps18a	ENSMUST00000123646	ENSMUSP00000122433	TRANSLATION	protein_coding	-	-	2	149	0	4.08	0	60.1	0	-2,2	-	-	10.002	MINOR
ENSMUSG00000023967	Mrps18a	ENSMUST00000146255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024298	Zfp871	ENSMUST00000057501	ENSMUSP00000050501	TRANSLATION	protein_coding	-	CCDS84294.1	1	596	60	1.45	1.5	287	0	-4,-5	-	-	13.92	MINOR
ENSMUSG00000024298	Zfp871	ENSMUST00000159086	ENSMUSP00000127178	TRANSLATION	protein_coding	-	CCDS50061.1	1	615	60	1.95	1.5	329.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024298	Zfp871	ENSMUST00000168337	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073458	Smok2a	ENSMUST00000080647	ENSMUSP00000094432	TRANSLATION	protein_coding	-	CCDS49951.1	1	504	17	1.02	0.5	234.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073458	Smok2a	ENSMUST00000238835	ENSMUSP00000159158	TRANSLATION	protein_coding	-	-	-	484	17	0.6	0.5	234.2	0	-4,-5	-	-	15.528	MINOR
ENSMUSG00000024033	Rsph1	ENSMUST00000235144	ENSMUSP00000158337	TRANSLATION	protein_coding	-	-	-	263	0	0	0	107.4	0	-4,-5	-	-	3.732	MINOR
ENSMUSG00000024033	Rsph1	ENSMUST00000024832	ENSMUSP00000024832	TRANSLATION	protein_coding	-	CCDS28604.1	1	301	0	0	1.5	145.2	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000024033	Rsph1	ENSMUST00000236379	ENSMUSP00000157620	TRANSLATION	protein_coding	-	-	-	284	0	0	0	145.2	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045991	Onecut2	ENSMUST00000175965	ENSMUSP00000135692	TRANSLATION	protein_coding	-	CCDS29302.2	1	505	0	1.4	2.9	144.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024542	Cep192	ENSMUST00000225303	ENSMUSP00000153461	TRANSLATION	nonsense_mediated_decay	start	-	-	1105	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024542	Cep192	ENSMUST00000224817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000225580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000025425	ENSMUSP00000025425	TRANSLATION	protein_coding	-	CCDS50313.1	5	2514	0	1.4	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024542	Cep192	ENSMUST00000225681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000225677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000225589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000223715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000223571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000224921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000224387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024542	Cep192	ENSMUST00000225077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057561	Eif1a	ENSMUST00000235849	ENSMUSP00000158046	TRANSLATION	protein_coding	-	-	-	83	0	0.5	0	0	0	-2,-5	-	-	1.998	MINOR
ENSMUSG00000057561	Eif1a	ENSMUST00000236497	ENSMUSP00000158364	TRANSLATION	protein_coding	-	-	-	193	0	0.5	0	0	0	-4,0	-	-	1.998	MINOR
ENSMUSG00000057561	Eif1a	ENSMUST00000237478	ENSMUSP00000158417	TRANSLATION	protein_coding	-	-	-	254	0	1.5	0.5	74	0	-4,0	-	-	12	MINOR
ENSMUSG00000057561	Eif1a	ENSMUST00000238168	ENSMUSP00000157513	TRANSLATION	protein_coding	-	CCDS29233.1	-	144	0	1.5	12.3	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057561	Eif1a	ENSMUST00000235455	ENSMUSP00000157583	TRANSLATION	protein_coding	-	CCDS29233.1	-	144	0	1.5	12.3	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057561	Eif1a	ENSMUST00000078079	ENSMUSP00000077223	TRANSLATION	protein_coding	-	CCDS29233.1	1	144	0	1.5	12.3	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057561	Eif1a	ENSMUST00000168382	ENSMUSP00000132018	TRANSLATION	protein_coding	-	CCDS29233.1	1	144	0	1.5	12.3	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057561	Eif1a	ENSMUST00000235973	ENSMUSP00000158565	TRANSLATION	protein_coding	-	CCDS29233.1	-	144	0	1.5	12.3	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000069441	Dsg1a	ENSMUST00000077146	ENSMUSP00000076393	TRANSLATION	protein_coding	-	CCDS50231.1	1	1057	29	8.125	0.5	187.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000073563	Csnk1g3	ENSMUST00000069597	ENSMUSP00000070259	TRANSLATION	protein_coding	-	CCDS37823.1	5	424	3	8.25	6.5	159.7	0	-4,-5	-	-	13.622	MINOR
ENSMUSG00000073563	Csnk1g3	ENSMUST00000237880	ENSMUSP00000158175	TRANSLATION	protein_coding	-	-	-	448	3	8.45	6.3	209.3	0	-4,-5	-	-	16.928	PRINCIPAL:1
ENSMUSG00000073563	Csnk1g3	ENSMUST00000236399	ENSMUSP00000158167	TRANSLATION	protein_coding	start/stop	-	-	140	0	2.2	0	115.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024502	Jakmip2	ENSMUST00000237393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024502	Jakmip2	ENSMUST00000235168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024502	Jakmip2	ENSMUST00000237069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024502	Jakmip2	ENSMUST00000238185	ENSMUSP00000158094	TRANSLATION	protein_coding	start	-	-	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024502	Jakmip2	ENSMUST00000237288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024502	Jakmip2	ENSMUST00000082254	ENSMUSP00000080881	TRANSLATION	protein_coding	-	CCDS50271.1	1	820	0	0	18.5	276.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024423	Impact	ENSMUST00000234409	ENSMUSP00000157328	TRANSLATION	protein_coding	stop	-	-	104	0	0	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024423	Impact	ENSMUST00000234763	ENSMUSP00000157250	TRANSLATION	protein_coding	stop	-	-	129	0	0	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024423	Impact	ENSMUST00000234488	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024423	Impact	ENSMUST00000235053	ENSMUSP00000157223	TRANSLATION	protein_coding	stop	-	-	178	0	0	0	51.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024423	Impact	ENSMUST00000234369	ENSMUSP00000157113	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0	0	35.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024423	Impact	ENSMUST00000025290	ENSMUSP00000025290	TRANSLATION	protein_coding	-	CCDS29068.1	1	318	0	1.695	0.5	179.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024423	Impact	ENSMUST00000235079	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024423	Impact	ENSMUST00000234035	ENSMUSP00000157188	TRANSLATION	protein_coding	stop	-	-	203	0	0.6	0	76.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024423	Impact	ENSMUST00000234793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042514	Klhl14	ENSMUST00000049105	ENSMUSP00000042015	TRANSLATION	protein_coding	-	CCDS37748.1	1	630	0	4.68	7.5	255.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000042514	Klhl14	ENSMUST00000122333	ENSMUSP00000113755	TRANSLATION	protein_coding	-	CCDS37748.1	5	630	0	4.68	7.5	255.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000117874	Gm50318	ENSMUST00000235292	ENSMUSP00000157573	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	138	0	0	0	175.4	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000024594	Prrc1	ENSMUST00000025490	ENSMUSP00000025490	TRANSLATION	protein_coding	-	CCDS37825.1	1	443	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024594	Prrc1	ENSMUST00000238069	ENSMUSP00000158347	TRANSLATION	protein_coding	stop	-	-	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024594	Prrc1	ENSMUST00000237031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024594	Prrc1	ENSMUST00000236755	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024594	Prrc1	ENSMUST00000236709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024594	Prrc1	ENSMUST00000238057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024578	Il17b	ENSMUST00000235713	ENSMUSP00000157496	TRANSLATION	nonsense_mediated_decay	-	-	-	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024578	Il17b	ENSMUST00000237575	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024578	Il17b	ENSMUST00000025471	ENSMUSP00000025471	TRANSLATION	protein_coding	-	CCDS29286.1	1	180	0	0.76	6.3	92.9	0	3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000024590	Lmnb1	ENSMUST00000025486	ENSMUSP00000025486	TRANSLATION	protein_coding	-	CCDS29261.1	1	588	0	6.2	6.3	395.1	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000024590	Lmnb1	ENSMUST00000128651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001383	Zmat2	ENSMUST00000235399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001383	Zmat2	ENSMUST00000001419	ENSMUSP00000001419	TRANSLATION	protein_coding	-	CCDS37773.1	1	199	4	0	17.5	29	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000090523	Gypc	ENSMUST00000174000	ENSMUSP00000133874	TRANSLATION	protein_coding	-	CCDS84368.1	3	78	0	0	0.5	0	1	-3,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000090523	Gypc	ENSMUST00000174459	ENSMUSP00000134317	TRANSLATION	protein_coding	-	CCDS57118.1	1	95	0	0	1.5	0	2	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000090523	Gypc	ENSMUST00000172434	ENSMUSP00000128514	TRANSLATION	protein_coding	-	-	5	72	0	0	0	0	2	-1,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000044024	Rell2	ENSMUST00000176902	ENSMUSP00000135176	TRANSLATION	protein_coding	-	-	5	208	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000177058	ENSMUSP00000135615	TRANSLATION	protein_coding	-	CCDS29195.2	5	303	0	0	6.3	69.5	2	-3,-5	-	-	7.88	PRINCIPAL:1
ENSMUSG00000044024	Rell2	ENSMUST00000091932	ENSMUSP00000089552	TRANSLATION	protein_coding	-	-	2	294	0	0	0	69.5	2	-3,-5	-	-	5.88	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000236289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044024	Rell2	ENSMUST00000169498	ENSMUSP00000128949	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000169360	ENSMUSP00000129880	TRANSLATION	protein_coding	stop	-	5	135	0	0	0	69.5	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000163591	ENSMUSP00000129299	TRANSLATION	protein_coding	-	-	5	212	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000163128	ENSMUSP00000127234	TRANSLATION	nonsense_mediated_decay	-	-	5	86	0	0	0	70.9	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000164499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044024	Rell2	ENSMUST00000176104	ENSMUSP00000135556	TRANSLATION	protein_coding	-	CCDS29195.2	5	303	0	0	6.3	69.5	2	-3,-5	-	-	7.88	PRINCIPAL:1
ENSMUSG00000044024	Rell2	ENSMUST00000235611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044024	Rell2	ENSMUST00000168056	ENSMUSP00000130051	TRANSLATION	nonsense_mediated_decay	-	-	5	148	0	0	0	69.5	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000044024	Rell2	ENSMUST00000166531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044024	Rell2	ENSMUST00000237652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044024	Rell2	ENSMUST00000070709	ENSMUSP00000070280	TRANSLATION	protein_coding	-	CCDS29195.2	1	303	0	0	6.3	69.5	2	-3,-5	-	-	7.88	PRINCIPAL:1
ENSMUSG00000047259	Mc4r	ENSMUST00000057942	ENSMUSP00000054776	TRANSLATION	protein_coding	-	CCDS29316.1	-	332	0	0.36	10.8	105.1	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000043079	Synpo	ENSMUST00000130044	ENSMUSP00000121756	TRANSLATION	protein_coding	-	CCDS37833.1	2	901	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000043079	Synpo	ENSMUST00000155195	ENSMUSP00000117897	TRANSLATION	protein_coding	-	CCDS50298.1	1	690	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043079	Synpo	ENSMUST00000123288	ENSMUSP00000124122	TRANSLATION	protein_coding	stop	-	3	15	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043079	Synpo	ENSMUST00000128528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043079	Synpo	ENSMUST00000160395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043079	Synpo	ENSMUST00000130360	ENSMUSP00000115355	TRANSLATION	protein_coding	-	-	1	1100	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043079	Synpo	ENSMUST00000154857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043079	Synpo	ENSMUST00000115318	ENSMUSP00000110973	TRANSLATION	protein_coding	-	CCDS50298.1	1	690	0	0	1.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000043079	Synpo	ENSMUST00000137894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043079	Synpo	ENSMUST00000097566	ENSMUSP00000095174	TRANSLATION	protein_coding	-	CCDS37833.1	1	901	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000043079	Synpo	ENSMUST00000139236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043079	Synpo	ENSMUST00000143275	ENSMUSP00000125272	TRANSLATION	protein_coding	-	-	5	929	0	0	1	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000052229	Gpr17	ENSMUST00000064016	ENSMUSP00000063670	TRANSLATION	protein_coding	-	CCDS29114.1	1	339	0	0.6	9.5	152.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034300	Fam53c	ENSMUST00000049281	ENSMUSP00000037034	TRANSLATION	protein_coding	-	CCDS29134.1	1	393	0	0	7.5	283.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034300	Fam53c	ENSMUST00000097622	ENSMUSP00000095226	TRANSLATION	protein_coding	-	CCDS29134.1	1	393	0	0	7.5	283.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034300	Fam53c	ENSMUST00000235929	ENSMUSP00000157415	TRANSLATION	nonsense_mediated_decay	-	-	-	53	0	0	0	30.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040957	Cables1	ENSMUST00000046948	ENSMUSP00000040639	TRANSLATION	protein_coding	-	CCDS29061.1	1	568	0	0	0.5	29	0	-2,1	-	-	6	PRINCIPAL:3
ENSMUSG00000040957	Cables1	ENSMUST00000225430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040957	Cables1	ENSMUST00000171109	ENSMUSP00000129463	TRANSLATION	protein_coding	-	CCDS50220.1	1	594	0	0	0.5	29	0	-2,1	-	-	6	ALTERNATIVE:2
ENSMUSG00000050875	Minar2	ENSMUST00000117064	ENSMUSP00000113487	TRANSLATION	nonsense_mediated_decay	-	-	1	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050875	Minar2	ENSMUST00000118510	ENSMUSP00000113023	TRANSLATION	protein_coding	-	-	2	151	0	0	0.5	126.4	1	-4,-5	-	-	5.634	MINOR
ENSMUSG00000050875	Minar2	ENSMUST00000154125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050875	Minar2	ENSMUST00000165666	ENSMUSP00000125952	TRANSLATION	protein_coding	-	CCDS29267.2	2	193	0	0	1.5	132.5	1	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050875	Minar2	ENSMUST00000175830	ENSMUSP00000135330	TRANSLATION	protein_coding	-	-	5	151	0	0	0.5	126.4	1	-4,-5	-	-	5.634	MINOR
ENSMUSG00000050875	Minar2	ENSMUST00000058633	ENSMUSP00000056379	TRANSLATION	protein_coding	-	-	1	151	0	0	0.5	126.4	1	-4,-5	-	-	5.634	MINOR
ENSMUSG00000050875	Minar2	ENSMUST00000175897	ENSMUSP00000135020	TRANSLATION	protein_coding	start/stop	-	3	146	0	0	0	93.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000045498	Pcdhb3	ENSMUST00000051754	ENSMUSP00000059180	TRANSLATION	protein_coding	-	CCDS29171.1	-	784	49	0.8	1.5	441.5	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000073551	Spink13	ENSMUST00000097557	ENSMUSP00000095165	TRANSLATION	protein_coding	-	CCDS50305.1	1	97	0	1.1	1.5	43.6	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000073551	Spink13	ENSMUST00000235190	ENSMUSP00000157623	TRANSLATION	protein_coding	-	CCDS50305.1	-	97	0	1.1	1.5	43.6	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024537	Psmg2	ENSMUST00000025418	ENSMUSP00000025418	TRANSLATION	protein_coding	-	CCDS29324.1	1	264	0	0	6.3	122.1	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000024537	Psmg2	ENSMUST00000236522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024537	Psmg2	ENSMUST00000235799	ENSMUSP00000157785	TRANSLATION	protein_coding	-	-	-	224	0	0	1.2	78.2	0	-4,-6	-	-	3.442	MINOR
ENSMUSG00000024528	Srfbp1	ENSMUST00000237229	ENSMUSP00000158232	TRANSLATION	nonsense_mediated_decay	-	-	-	77	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024528	Srfbp1	ENSMUST00000237434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024528	Srfbp1	ENSMUST00000238100	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024528	Srfbp1	ENSMUST00000237092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024528	Srfbp1	ENSMUST00000025406	ENSMUSP00000025406	TRANSLATION	protein_coding	-	CCDS37819.1	1	441	0	0	1.5	42.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024528	Srfbp1	ENSMUST00000235538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025885	Myo5b	ENSMUST00000122914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025885	Myo5b	ENSMUST00000177366	ENSMUSP00000135825	TRANSLATION	protein_coding	start/stop	-	5	128	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025885	Myo5b	ENSMUST00000146253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025885	Myo5b	ENSMUST00000121875	ENSMUSP00000112728	TRANSLATION	protein_coding	-	-	5	1844	17	29.13	1	1133.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025885	Myo5b	ENSMUST00000125751	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025885	Myo5b	ENSMUST00000125882	ENSMUSP00000123123	TRANSLATION	protein_coding	stop	-	3	183	14	4.132	0	170.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025885	Myo5b	ENSMUST00000140904	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025885	Myo5b	ENSMUST00000154986	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025885	Myo5b	ENSMUST00000135878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025885	Myo5b	ENSMUST00000120161	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025885	Myo5b	ENSMUST00000074157	ENSMUSP00000073790	TRANSLATION	protein_coding	-	CCDS37858.1	1	1818	17	29.13	0.5	1133.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024287	Thoc1	ENSMUST00000235035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234370	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000234111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024287	Thoc1	ENSMUST00000025137	ENSMUSP00000025137	TRANSLATION	protein_coding	-	CCDS37733.1	1	657	0	1	11.6	554.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024287	Thoc1	ENSMUST00000234975	ENSMUSP00000157070	TRANSLATION	protein_coding	start	-	-	385	0	1	0	246.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000025377	ENSMUSP00000025377	TRANSLATION	protein_coding	-	CCDS29216.1	1	446	0	9	10.8	0	0	-4,-7	-	-	8.648	MINOR
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000153737	ENSMUSP00000157434	TRANSLATION	protein_coding	stop	-	3	79	0	2.132	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000117687	ENSMUSP00000113731	TRANSLATION	protein_coding	-	-	1	443	0	9	15.8	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000236238	ENSMUSP00000157412	TRANSLATION	protein_coding	stop	-	-	163	0	4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000155262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000239360	ENSMUSP00000159213	TRANSLATION	protein_coding	-	-	-	501	0	9	6	0	0	-4,-2	-	-	7.352	MINOR
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000120632	ENSMUSP00000113411	TRANSLATION	protein_coding	-	-	5	443	0	9	15.8	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024500	Ppp2r2b	ENSMUST00000136118	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044022	Pcdhb21	ENSMUST00000061405	ENSMUSP00000056424	TRANSLATION	protein_coding	-	CCDS29186.1	-	774	57	0.8	0.5	423.2	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034391	Fbxo15	ENSMUST00000225445	ENSMUSP00000152915	TRANSLATION	nonsense_mediated_decay	-	-	-	282	0	0	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034391	Fbxo15	ENSMUST00000224467	ENSMUSP00000153473	TRANSLATION	protein_coding	-	-	-	433	0	0	0	38.7	0	-4,-5	-	-	5.82	ALTERNATIVE:2
ENSMUSG00000034391	Fbxo15	ENSMUST00000223789	ENSMUSP00000158102	TRANSLATION	protein_coding	-	-	-	512	0	0	0.5	39.9	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000034391	Fbxo15	ENSMUST00000225015	ENSMUSP00000153105	TRANSLATION	protein_coding	start	-	-	76	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034391	Fbxo15	ENSMUST00000037718	ENSMUSP00000045925	TRANSLATION	protein_coding	-	CCDS37877.1	1	478	0	0	0.5	39.9	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000034391	Fbxo15	ENSMUST00000224427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024621	Csf1r	ENSMUST00000237706	ENSMUSP00000157861	TRANSLATION	protein_coding	stop	-	-	103	0	1.3	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000024621	Csf1r	ENSMUST00000237485	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024621	Csf1r	ENSMUST00000237873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024621	Csf1r	ENSMUST00000025523	ENSMUSP00000025523	TRANSLATION	protein_coding	-	CCDS29280.1	1	977	21	18.56	1.5	382.8	1	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024621	Csf1r	ENSMUST00000235447	ENSMUSP00000158568	TRANSLATION	protein_coding	stop	-	-	139	0	2.3	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000024621	Csf1r	ENSMUST00000115268	ENSMUSP00000110923	TRANSLATION	protein_coding	-	CCDS29280.1	1	977	21	18.56	1.5	382.8	1	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024524	Gnal	ENSMUST00000025402	ENSMUSP00000025402	TRANSLATION	protein_coding	-	CCDS29317.1	1	448	24	9.3	1.5	355.6	0	-4,-5	-	-	16.256	MINOR
ENSMUSG00000024524	Gnal	ENSMUST00000236771	ENSMUSP00000158245	TRANSLATION	protein_coding	-	CCDS29318.1	-	381	24	10.2	18.5	356.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024524	Gnal	ENSMUST00000237304	ENSMUSP00000158139	TRANSLATION	protein_coding	stop	-	-	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024524	Gnal	ENSMUST00000076605	ENSMUSP00000075908	TRANSLATION	protein_coding	-	CCDS29318.1	1	381	24	10.2	18.5	356.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024524	Gnal	ENSMUST00000237445	ENSMUSP00000157957	TRANSLATION	protein_coding	-	-	-	143	0	0.4	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024524	Gnal	ENSMUST00000237985	ENSMUSP00000158520	TRANSLATION	protein_coding	-	-	-	230	9	3.55	0	96.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024524	Gnal	ENSMUST00000236918	ENSMUSP00000157561	TRANSLATION	protein_coding	-	-	-	134	7	3.45	0	70.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024524	Gnal	ENSMUST00000236551	ENSMUSP00000157813	TRANSLATION	protein_coding	-	-	-	230	9	3.55	0	96.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000034484	Snx2	ENSMUST00000236111	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034484	Snx2	ENSMUST00000236911	ENSMUSP00000157395	TRANSLATION	nonsense_mediated_decay	-	-	-	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034484	Snx2	ENSMUST00000037850	ENSMUSP00000039243	TRANSLATION	protein_coding	-	CCDS37821.1	1	519	0	9	11.6	393.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034484	Snx2	ENSMUST00000235943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034484	Snx2	ENSMUST00000237238	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024483	Ankhd1	ENSMUST00000152060	ENSMUSP00000116047	TRANSLATION	protein_coding	start/stop	-	3	335	0	3.98	0	86.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000143966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024483	Ankhd1	ENSMUST00000136030	ENSMUSP00000115837	TRANSLATION	protein_coding	start/stop	-	3	219	0	3.28	0	86	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000037072	ENSMUSP00000040300	TRANSLATION	protein_coding	start	-	5	1021	0	0.78	0	54.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000155329	ENSMUSP00000123270	TRANSLATION	protein_coding	-	CCDS50256.1	5	2548	0	17.79	0.5	540.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024483	Ankhd1	ENSMUST00000116653	ENSMUSP00000112352	TRANSLATION	protein_coding	start	-	3	169	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000156424	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024483	Ankhd1	ENSMUST00000142780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024483	Ankhd1	ENSMUST00000130035	ENSMUSP00000117110	TRANSLATION	nonsense_mediated_decay	start	-	5	111	0	2.35	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000153612	ENSMUSP00000116462	TRANSLATION	nonsense_mediated_decay	start	-	3	91	0	1.6	0	45.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000152940	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024483	Ankhd1	ENSMUST00000006205	ENSMUSP00000006205	TRANSLATION	nonsense_mediated_decay	-	-	5	2485	0	17.79	0	540.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024483	Ankhd1	ENSMUST00000134146	ENSMUSP00000122136	TRANSLATION	protein_coding	start/stop	-	3	214	0	1.6	0	29	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000045569	Mc2r	ENSMUST00000052347	ENSMUSP00000058691	TRANSLATION	protein_coding	-	CCDS29328.1	1	296	0	0.42	7.5	99	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024425	Ndfip1	ENSMUST00000238135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024425	Ndfip1	ENSMUST00000236171	ENSMUSP00000157630	TRANSLATION	protein_coding	start	-	-	164	0	0	0	32	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000024425	Ndfip1	ENSMUST00000235458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024425	Ndfip1	ENSMUST00000236480	ENSMUSP00000158119	TRANSLATION	nonsense_mediated_decay	-	-	-	167	0	0	0	0	2	-1,-4	-	-	-1	MINOR
ENSMUSG00000024425	Ndfip1	ENSMUST00000236052	ENSMUSP00000157954	TRANSLATION	protein_coding	-	-	-	214	0	0	0	31.8	3	-4,-5	-	-	5.964	ALTERNATIVE:2
ENSMUSG00000024425	Ndfip1	ENSMUST00000025293	ENSMUSP00000025293	TRANSLATION	protein_coding	-	CCDS37789.1	1	221	0	0	0.5	28.7	3	-1,-4	-	-	5.382	PRINCIPAL:2
ENSMUSG00000024425	Ndfip1	ENSMUST00000236803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024425	Ndfip1	ENSMUST00000236085	ENSMUSP00000158314	TRANSLATION	protein_coding	-	CCDS37789.1	-	221	0	0	0.5	28.7	3	-1,-4	-	-	5.382	PRINCIPAL:2
ENSMUSG00000103332	Pcdhga2	ENSMUST00000193869	ENSMUSP00000141482	TRANSLATION	protein_coding	-	CCDS79623.1	1	931	54	1	0.5	553.7	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000057766	Ankrd29	ENSMUST00000234405	ENSMUSP00000157141	TRANSLATION	nonsense_mediated_decay	start	-	-	99	0	2.68	0	49.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057766	Ankrd29	ENSMUST00000122408	ENSMUSP00000112888	TRANSLATION	protein_coding	-	-	5	276	0	7.648	0	134.2	0	-4,-7	-	-	8.454	MINOR
ENSMUSG00000057766	Ankrd29	ENSMUST00000118525	ENSMUSP00000114028	TRANSLATION	protein_coding	-	CCDS50221.1	1	309	0	8.648	1.5	160	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000057766	Ankrd29	ENSMUST00000234183	ENSMUSP00000156996	TRANSLATION	protein_coding	-	-	-	272	0	7.848	0	140.5	0	-4,-7	-	-	9.228	MINOR
ENSMUSG00000057766	Ankrd29	ENSMUST00000142066	ENSMUSP00000119314	TRANSLATION	protein_coding	stop	-	3	88	0	2.698	0	46.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000057766	Ankrd29	ENSMUST00000234212	ENSMUSP00000157031	TRANSLATION	protein_coding	start/stop	-	-	202	0	5.85	0	110.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057766	Ankrd29	ENSMUST00000137948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024234	Mtpap	ENSMUST00000235025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024234	Mtpap	ENSMUST00000234422	ENSMUSP00000157305	TRANSLATION	nonsense_mediated_decay	-	-	-	117	0	1.2	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024234	Mtpap	ENSMUST00000025077	ENSMUSP00000025077	TRANSLATION	protein_coding	-	CCDS37718.1	1	585	19	10.24	0.5	0	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000024234	Mtpap	ENSMUST00000234924	ENSMUSP00000156990	TRANSLATION	protein_coding	start	-	-	338	14	6.08	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024234	Mtpap	ENSMUST00000234614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024234	Mtpap	ENSMUST00000234186	ENSMUSP00000157237	TRANSLATION	nonsense_mediated_decay	-	-	-	218	0	2.66	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024644	Cndp2	ENSMUST00000235149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024644	Cndp2	ENSMUST00000237605	ENSMUSP00000157816	TRANSLATION	protein_coding	stop	-	-	20	3	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024644	Cndp2	ENSMUST00000168419	ENSMUSP00000128696	TRANSLATION	protein_coding	-	CCDS29383.1	1	475	19	10	16.2	170.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024644	Cndp2	ENSMUST00000236125	ENSMUSP00000157733	TRANSLATION	protein_coding	stop	-	-	122	3	2.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024644	Cndp2	ENSMUST00000236415	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024644	Cndp2	ENSMUST00000235534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024644	Cndp2	ENSMUST00000025546	ENSMUSP00000025546	TRANSLATION	protein_coding	-	CCDS29383.1	1	475	19	10	16.2	170.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024644	Cndp2	ENSMUST00000237533	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024644	Cndp2	ENSMUST00000236029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024442	Dele1	ENSMUST00000236078	ENSMUSP00000158081	TRANSLATION	protein_coding	-	-	-	312	0	0.16	0	0	0	-4,0	-	-	0.348	MINOR
ENSMUSG00000024442	Dele1	ENSMUST00000236841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024442	Dele1	ENSMUST00000236927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024442	Dele1	ENSMUST00000236994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024442	Dele1	ENSMUST00000235904	ENSMUSP00000157678	TRANSLATION	nonsense_mediated_decay	-	-	-	510	0	2.76	1.5	87.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024442	Dele1	ENSMUST00000235762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024442	Dele1	ENSMUST00000025314	ENSMUSP00000025314	TRANSLATION	protein_coding	-	CCDS50260.1	1	510	0	2.76	1.5	87.3	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000056130	Ticam2	ENSMUST00000149929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056130	Ticam2	ENSMUST00000070084	ENSMUSP00000066239	TRANSLATION	protein_coding	-	CCDS29232.1	1	232	0	1	1.5	33.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047307	Pcdhb13	ENSMUST00000056915	ENSMUSP00000061087	TRANSLATION	protein_coding	-	CCDS29179.1	-	796	53	0.8	1.5	437.2	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000063281	Zfp35	ENSMUST00000074941	ENSMUSP00000074475	TRANSLATION	protein_coding	-	CCDS29097.1	1	580	72	0.4	1.5	409.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038555	Reep2	ENSMUST00000043484	ENSMUSP00000036065	TRANSLATION	protein_coding	-	CCDS29135.1	1	254	0	0	7.5	96.6	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000044982	Sft2d3	ENSMUST00000054984	ENSMUSP00000100656	TRANSLATION	protein_coding	-	CCDS50243.1	-	212	0	0	2.9	72.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000001804	Dsg4	ENSMUST00000019426	ENSMUSP00000019426	TRANSLATION	protein_coding	-	CCDS29082.1	1	1041	34	9.54	1.5	185.3	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000049411	Tmem241	ENSMUST00000055447	ENSMUSP00000052001	TRANSLATION	protein_coding	-	CCDS84359.1	1	282	0	0	0.5	0	13	-1,-5	-	-	0	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000210051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049411	Tmem241	ENSMUST00000092075	ENSMUSP00000089709	TRANSLATION	protein_coding	-	-	3	188	0	0	0	0	7	-1,-5	-	-	0	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000211298	ENSMUSP00000147954	TRANSLATION	nonsense_mediated_decay	-	-	1	188	0	0	0	0	7	-1,-5	-	-	-1	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000209859	ENSMUSP00000147687	TRANSLATION	protein_coding	-	CCDS84358.1	1	297	0	0	7.6	0	14	-1,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000049411	Tmem241	ENSMUST00000234833	ENSMUSP00000157297	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000050228	ENSMUSP00000062148	TRANSLATION	nonsense_mediated_decay	-	-	1	107	0	0	0	0	2	-1,-6	-	-	-1	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000209628	ENSMUSP00000148000	TRANSLATION	protein_coding	start	-	1	153	0	0	0	0	8	0,-2	-	-	-1	MINOR
ENSMUSG00000049411	Tmem241	ENSMUST00000211480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041923	Nol4	ENSMUST00000097652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041923	Nol4	ENSMUST00000081423	ENSMUSP00000080150	TRANSLATION	protein_coding	-	CCDS50235.1	1	564	3	0	0.5	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000041923	Nol4	ENSMUST00000165323	ENSMUSP00000125860	TRANSLATION	protein_coding	stop	-	5	108	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041923	Nol4	ENSMUST00000069215	ENSMUSP00000064166	TRANSLATION	protein_coding	start	-	1	419	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041923	Nol4	ENSMUST00000164186	ENSMUSP00000130950	TRANSLATION	protein_coding	-	CCDS84363.1	5	637	3	0	8.8	0	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000041923	Nol4	ENSMUST00000164521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041923	Nol4	ENSMUST00000092015	ENSMUSP00000089642	TRANSLATION	protein_coding	start	-	1	355	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041923	Nol4	ENSMUST00000097651	ENSMUSP00000095256	TRANSLATION	protein_coding	-	CCDS29093.2	1	483	3	0	0.5	0	0	-4,-5	-	-	3	MINOR
ENSMUSG00000041923	Nol4	ENSMUST00000164893	ENSMUSP00000127870	TRANSLATION	protein_coding	-	CCDS84362.1	5	573	3	0	8.8	0	0	-4,-5	-	-	6	ALTERNATIVE:1
ENSMUSG00000054477	Kcnn2	ENSMUST00000183897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054477	Kcnn2	ENSMUST00000235217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054477	Kcnn2	ENSMUST00000236405	ENSMUSP00000158371	TRANSLATION	protein_coding	start	-	-	78	0	1.75	0	39.1	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000054477	Kcnn2	ENSMUST00000211323	ENSMUSP00000148153	TRANSLATION	protein_coding	-	CCDS84380.1	1	574	0	5.18	0.5	344.2	7	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000054477	Kcnn2	ENSMUST00000184101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054477	Kcnn2	ENSMUST00000183850	ENSMUSP00000139350	TRANSLATION	protein_coding	-	CCDS84380.1	1	574	0	5.18	0.5	344.2	7	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000054477	Kcnn2	ENSMUST00000167895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054477	Kcnn2	ENSMUST00000183623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054477	Kcnn2	ENSMUST00000169783	ENSMUSP00000129659	TRANSLATION	protein_coding	-	-	1	434	0	5.04	0	275.2	6	-4,-1	-	-	7.578	MINOR
ENSMUSG00000054477	Kcnn2	ENSMUST00000066890	ENSMUSP00000067884	TRANSLATION	protein_coding	-	-	5	839	0	5.18	0	344.2	7	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000024529	Lox	ENSMUST00000171470	ENSMUSP00000129247	TRANSLATION	protein_coding	-	CCDS50289.1	1	411	0	0	1.5	312.5	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000024529	Lox	ENSMUST00000025409	ENSMUSP00000025409	TRANSLATION	protein_coding	-	CCDS50289.1	1	411	0	0	1.5	312.5	0	3,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000014504	Srp19	ENSMUST00000126518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014504	Srp19	ENSMUST00000072576	ENSMUSP00000072386	TRANSLATION	protein_coding	-	CCDS37757.1	1	144	0	4	1.5	104.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000014504	Srp19	ENSMUST00000142010	ENSMUSP00000116373	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	1.25	0	28.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000014504	Srp19	ENSMUST00000119329	ENSMUSP00000112826	TRANSLATION	protein_coding	-	-	2	120	0	3.25	0.5	61.3	0	-4,-6	-	-	7.902	MINOR
ENSMUSG00000014504	Srp19	ENSMUST00000131713	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014504	Srp19	ENSMUST00000140279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024620	Pdgfrb	ENSMUST00000115274	ENSMUSP00000110929	TRANSLATION	protein_coding	-	-	1	1103	21	12.6	0	430	1	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000024620	Pdgfrb	ENSMUST00000025522	ENSMUSP00000025522	TRANSLATION	protein_coding	-	CCDS50300.1	1	1099	21	12.6	1.5	430	1	4,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000001380	Hars	ENSMUST00000235494	ENSMUSP00000157507	TRANSLATION	protein_coding	start	-	-	138	10	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001380	Hars	ENSMUST00000001416	ENSMUSP00000001416	TRANSLATION	protein_coding	-	CCDS29164.1	1	509	25	14.5	8.8	107.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000001380	Hars	ENSMUST00000235863	ENSMUSP00000158246	TRANSLATION	nonsense_mediated_decay	-	-	-	125	0	3	0	45.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001380	Hars	ENSMUST00000236395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035420	Fam170a	ENSMUST00000238078	ENSMUSP00000158194	TRANSLATION	protein_coding	-	-	-	370	3	0	0.5	0	0	-4,-5	-	-	3	ALTERNATIVE:2
ENSMUSG00000035420	Fam170a	ENSMUST00000238113	ENSMUSP00000158112	TRANSLATION	nonsense_mediated_decay	-	-	-	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035420	Fam170a	ENSMUST00000236949	ENSMUSP00000158518	TRANSLATION	nonsense_mediated_decay	-	-	-	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035420	Fam170a	ENSMUST00000039121	ENSMUSP00000035910	TRANSLATION	protein_coding	-	CCDS29243.1	1	333	3	0	0.5	0	0	-4,-5	-	-	3	PRINCIPAL:2
ENSMUSG00000059898	Dsc3	ENSMUST00000225110	ENSMUSP00000153261	TRANSLATION	protein_coding	-	CCDS37744.1	-	896	47	10.55	0.5	329.3	1	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000059898	Dsc3	ENSMUST00000115848	ENSMUSP00000111514	TRANSLATION	protein_coding	-	-	2	839	47	10.55	0.5	301.1	1	-1,-4	-	-	16.308	MINOR
ENSMUSG00000059898	Dsc3	ENSMUST00000223946	ENSMUSP00000153279	TRANSLATION	protein_coding	stop	-	-	152	1	1.75	0	80.5	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000091055	Siglec15	ENSMUST00000170760	ENSMUSP00000126901	TRANSLATION	protein_coding	-	CCDS50329.1	1	342	0	0.98	1.5	45.1	0	-1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000062526	Mppe1	ENSMUST00000237279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062526	Mppe1	ENSMUST00000237631	ENSMUSP00000158018	TRANSLATION	protein_coding	stop	-	-	86	1	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000062526	Mppe1	ENSMUST00000073054	ENSMUSP00000072808	TRANSLATION	protein_coding	-	CCDS29319.1	1	397	7	0	1.5	48.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000062526	Mppe1	ENSMUST00000236244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045629	Sh3tc2	ENSMUST00000235860	ENSMUSP00000157442	TRANSLATION	protein_coding	-	-	-	1228	0	0	0	68.7	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000045629	Sh3tc2	ENSMUST00000051720	ENSMUSP00000055094	TRANSLATION	protein_coding	-	CCDS37840.1	2	1289	0	0	0.5	68.7	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000045629	Sh3tc2	ENSMUST00000236759	ENSMUSP00000158088	TRANSLATION	protein_coding	start	-	-	995	0	0	0	14.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000045629	Sh3tc2	ENSMUST00000235652	ENSMUSP00000158542	TRANSLATION	nonsense_mediated_decay	-	-	-	1001	0	0	0	54.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033184	Tmed7	ENSMUST00000151189	ENSMUSP00000120904	TRANSLATION	protein_coding	-	CCDS50283.1	1	224	0	1.2	7.5	170.1	0	2,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000033184	Tmed7	ENSMUST00000036030	ENSMUSP00000043660	TRANSLATION	protein_coding	-	-	5	188	0	1.2	1.2	133.4	0	2,-2	-	-	9.891	MINOR
ENSMUSG00000033184	Tmed7	ENSMUST00000143178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024534	Sncaip	ENSMUST00000179038	ENSMUSP00000137201	TRANSLATION	protein_coding	stop	-	5	10	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024534	Sncaip	ENSMUST00000178011	ENSMUSP00000137549	TRANSLATION	protein_coding	-	CCDS37820.2	1	915	0	4.516	1.5	143	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024534	Sncaip	ENSMUST00000025413	ENSMUSP00000025413	TRANSLATION	protein_coding	-	CCDS57124.1	1	965	0	4.516	1.5	143	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024534	Sncaip	ENSMUST00000163742	ENSMUSP00000127189	TRANSLATION	protein_coding	-	CCDS37820.2	5	915	0	4.516	1.5	143	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024534	Sncaip	ENSMUST00000178883	ENSMUSP00000136200	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024534	Sncaip	ENSMUST00000179625	ENSMUSP00000136838	TRANSLATION	protein_coding	-	-	5	855	0	3.716	0	121	0	-4,-5	-	-	9.078	MINOR
ENSMUSG00000024534	Sncaip	ENSMUST00000178678	ENSMUSP00000137367	TRANSLATION	protein_coding	-	CCDS57124.1	1	965	0	4.516	1.5	143	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024534	Sncaip	ENSMUST00000115410	ENSMUSP00000111069	TRANSLATION	protein_coding	-	-	1	914	0	4.516	1.5	143	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024534	Sncaip	ENSMUST00000180259	ENSMUSP00000137282	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024534	Sncaip	ENSMUST00000179689	ENSMUSP00000137107	TRANSLATION	protein_coding	-	-	5	503	0	2.766	1.2	84.4	0	-4,-5	-	-	4.986	MINOR
ENSMUSG00000024534	Sncaip	ENSMUST00000177861	ENSMUSP00000136021	TRANSLATION	nonsense_mediated_decay	-	-	5	62	0	0.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006050	Sra1	ENSMUST00000173202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006050	Sra1	ENSMUST00000174125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006050	Sra1	ENSMUST00000173875	ENSMUSP00000133360	TRANSLATION	protein_coding	-	CCDS29156.2	1	232	0	3	1.5	227.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000006050	Sra1	ENSMUST00000006209	ENSMUSP00000006209	TRANSLATION	protein_coding	start	-	5	223	0	3	0	214.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006050	Sra1	ENSMUST00000236330	ENSMUSP00000158432	TRANSLATION	protein_coding	start	-	-	184	0	3	0	227.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006050	Sra1	ENSMUST00000173482	ENSMUSP00000134589	TRANSLATION	nonsense_mediated_decay	start	-	5	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024294	Mib1	ENSMUST00000052838	ENSMUSP00000054428	TRANSLATION	protein_coding	-	CCDS29058.1	1	1006	20	15.9	15.8	495	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024294	Mib1	ENSMUST00000150000	ENSMUSP00000122879	TRANSLATION	protein_coding	start	-	1	265	20	2.55	0	123	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000024294	Mib1	ENSMUST00000131073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024294	Mib1	ENSMUST00000165555	ENSMUSP00000131712	TRANSLATION	protein_coding	-	CCDS29058.1	1	1006	20	15.9	15.8	495	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024294	Mib1	ENSMUST00000234047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024294	Mib1	ENSMUST00000124288	ENSMUSP00000114289	TRANSLATION	protein_coding	start	-	1	641	20	9.15	0	289.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051375	Pcdh1	ENSMUST00000160721	ENSMUSP00000124732	TRANSLATION	protein_coding	-	-	5	360	18	2.02	0	83.4	0	1,-2	-	-	6	MINOR
ENSMUSG00000051375	Pcdh1	ENSMUST00000159405	ENSMUSP00000125309	TRANSLATION	protein_coding	-	CCDS29197.1	5	1038	65	2	1.7	659.5	1	1,-2	-	-	17.94	PRINCIPAL:1
ENSMUSG00000051375	Pcdh1	ENSMUST00000057185	ENSMUSP00000055199	TRANSLATION	protein_coding	-	CCDS29197.1	1	1038	65	2	1.7	659.5	1	1,-2	-	-	17.94	PRINCIPAL:1
ENSMUSG00000051375	Pcdh1	ENSMUST00000193828	ENSMUSP00000142328	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000051375	Pcdh1	ENSMUST00000194312	ENSMUSP00000141877	TRANSLATION	protein_coding	stop	-	3	45	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000051375	Pcdh1	ENSMUST00000161701	ENSMUSP00000125576	TRANSLATION	protein_coding	start	-	5	1077	58	1.62	0	629.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024486	Hbegf	ENSMUST00000025363	ENSMUSP00000025363	TRANSLATION	protein_coding	-	CCDS29153.1	1	208	0	1.6	6.3	22.3	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000024486	Hbegf	ENSMUST00000236520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024486	Hbegf	ENSMUST00000237621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024507	Hsd17b4	ENSMUST00000139502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024507	Hsd17b4	ENSMUST00000025385	ENSMUSP00000025385	TRANSLATION	protein_coding	-	CCDS29242.1	1	735	34	18.91	5.1	345.5	0	-3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000024507	Hsd17b4	ENSMUST00000152388	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024507	Hsd17b4	ENSMUST00000127325	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079614	Seh1l	ENSMUST00000025421	ENSMUSP00000025421	TRANSLATION	protein_coding	-	CCDS50312.1	1	360	2	7.5	15	44.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000079614	Seh1l	ENSMUST00000237700	ENSMUSP00000157877	TRANSLATION	protein_coding	-	-	-	357	2	7.5	12.8	44.1	0	-4,-5	-	-	17.372	ALTERNATIVE:1
ENSMUSG00000033032	Afap1l1	ENSMUST00000147278	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033032	Afap1l1	ENSMUST00000154876	ENSMUSP00000121278	TRANSLATION	nonsense_mediated_decay	-	-	1	123	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033032	Afap1l1	ENSMUST00000120472	ENSMUSP00000113286	TRANSLATION	protein_coding	-	CCDS50303.1	1	768	0	1.6	3.9	69.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000047879	Usp14	ENSMUST00000116669	ENSMUSP00000112368	TRANSLATION	protein_coding	-	CCDS37734.1	1	458	4	12.26	3.9	172.2	0	-4,-5	-	-	15.096	MINOR
ENSMUSG00000047879	Usp14	ENSMUST00000145929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000154088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000150321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000142013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000133594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000092096	ENSMUSP00000089728	TRANSLATION	protein_coding	-	CCDS37735.1	1	493	4	13.26	6.3	172.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000047879	Usp14	ENSMUST00000234165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000128334	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047879	Usp14	ENSMUST00000234243	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045689	Pcdhb4	ENSMUST00000056712	ENSMUSP00000059770	TRANSLATION	protein_coding	-	CCDS29172.1	-	784	56	1	0.5	443.7	0	3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000002477	Snrpd1	ENSMUST00000234207	ENSMUSP00000157360	TRANSLATION	protein_coding	-	-	-	78	0	2.25	2.2	0	0	-4,-6	-	-	4.302	MINOR
ENSMUSG00000002477	Snrpd1	ENSMUST00000002551	ENSMUSP00000002551	TRANSLATION	protein_coding	-	CCDS29056.1	1	119	0	3.25	17	67.5	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000002477	Snrpd1	ENSMUST00000234077	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002477	Snrpd1	ENSMUST00000234728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002477	Snrpd1	ENSMUST00000235020	ENSMUSP00000157119	TRANSLATION	protein_coding	-	-	-	98	0	0.75	0	0	0	-4,-6	-	-	1.002	MINOR
ENSMUSG00000025425	St8sia5	ENSMUST00000236592	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025425	St8sia5	ENSMUST00000079618	ENSMUSP00000078566	TRANSLATION	protein_coding	-	CCDS29353.1	1	376	13	2.64	12.5	258.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025425	St8sia5	ENSMUST00000075290	ENSMUSP00000074764	TRANSLATION	protein_coding	-	CCDS50325.1	1	412	13	2.64	6.3	258.8	0	-4,-7	-	-	19.844	MINOR
ENSMUSG00000058925	Ccdc192	ENSMUST00000127130	ENSMUSP00000117563	TRANSLATION	protein_coding	start	-	1	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058925	Ccdc192	ENSMUST00000135806	ENSMUSP00000115752	TRANSLATION	protein_coding	-	CCDS79645.1	1	175	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000058925	Ccdc192	ENSMUST00000079738	ENSMUSP00000078674	TRANSLATION	protein_coding	-	CCDS50295.1	1	271	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000058925	Ccdc192	ENSMUST00000123872	ENSMUSP00000114519	TRANSLATION	protein_coding	start	-	3	254	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000103707	Pcdha6	ENSMUST00000193777	ENSMUSP00000141587	TRANSLATION	protein_coding	-	CCDS79618.1	1	946	49	3.33	0.5	551.5	1	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000103707	Pcdha6	ENSMUST00000194751	ENSMUSP00000142285	TRANSLATION	nonsense_mediated_decay	-	-	1	131	3	1	0	105.5	0	2,-2	-	-	-1	MINOR
ENSMUSG00000103707	Pcdha6	ENSMUST00000193389	ENSMUSP00000141459	TRANSLATION	protein_coding	-	-	1	900	49	3.33	0	463.8	1	2,-2	-	-	12.738	MINOR
ENSMUSG00000036941	Elac1	ENSMUST00000041138	ENSMUSP00000041793	TRANSLATION	protein_coding	-	CCDS37855.1	1	362	8	3	7.5	41.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000110277	Gm45871	ENSMUST00000210766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110277	Gm45871	ENSMUST00000211710	ENSMUSP00000147542	TRANSLATION	protein_coding	-	-	3	540	59	3	0.5	351.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000110277	Gm45871	ENSMUST00000209969	ENSMUSP00000147882	TRANSLATION	protein_coding	-	-	5	187	0	1	0	71.8	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000110277	Gm45871	ENSMUST00000209821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045215	Asxl3	ENSMUST00000153836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045215	Asxl3	ENSMUST00000239326	ENSMUSP00000159205	TRANSLATION	protein_coding	-	-	-	2260	0	0	0	193.1	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000045215	Asxl3	ENSMUST00000097655	ENSMUSP00000095260	TRANSLATION	protein_coding	-	CCDS50234.1	5	2204	0	0	0.5	193.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000045215	Asxl3	ENSMUST00000120223	ENSMUSP00000112793	TRANSLATION	protein_coding	-	CCDS50234.1	5	2204	0	0	0.5	193.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000024370	Cdc23	ENSMUST00000135208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000025228	ENSMUSP00000025228	TRANSLATION	protein_coding	-	-	1	571	0	14	1.5	37.8	0	-2,-5	-	-	10.744	MINOR
ENSMUSG00000024370	Cdc23	ENSMUST00000133162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000136943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000151409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000155307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000138400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024370	Cdc23	ENSMUST00000133181	ENSMUSP00000122420	TRANSLATION	protein_coding	-	CCDS29132.1	1	597	0	14.75	5.1	37.8	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024571	Gm16286	ENSMUST00000025463	ENSMUSP00000025463	TRANSLATION	protein_coding	-	-	1	220	22	1	1.5	56.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024571	Gm16286	ENSMUST00000125352	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024571	Gm16286	ENSMUST00000153363	ENSMUSP00000158291	TRANSLATION	protein_coding	-	-	1	220	22	1	1.5	56.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024571	Gm16286	ENSMUST00000127234	ENSMUSP00000121883	TRANSLATION	protein_coding	-	-	1	220	22	1	1.5	56.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024571	Gm16286	ENSMUST00000125127	ENSMUSP00000123193	TRANSLATION	protein_coding	-	-	1	220	22	1	1.5	56.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024571	Gm16286	ENSMUST00000126177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024571	Gm16286	ENSMUST00000155879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024571	Gm16286	ENSMUST00000145116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024571	Gm16286	ENSMUST00000156400	ENSMUSP00000157552	TRANSLATION	protein_coding	-	-	3	220	22	1	1.5	56.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039540	4921524L21Rik	ENSMUST00000044829	ENSMUSP00000035514	TRANSLATION	protein_coding	-	CCDS50216.1	1	438	0	0	0.5	36.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000039540	4921524L21Rik	ENSMUST00000234337	ENSMUSP00000157133	TRANSLATION	protein_coding	-	-	-	385	0	0	0	36.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000039540	4921524L21Rik	ENSMUST00000234821	ENSMUSP00000157275	TRANSLATION	protein_coding	stop	-	-	123	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041891	Lman1	ENSMUST00000236866	ENSMUSP00000158495	TRANSLATION	protein_coding	-	CCDS29313.1	-	517	15	6.85	2.7	309.1	1	0,1	-	-	18	PRINCIPAL:1
ENSMUSG00000041891	Lman1	ENSMUST00000144793	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041891	Lman1	ENSMUST00000236292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041891	Lman1	ENSMUST00000155895	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041891	Lman1	ENSMUST00000120461	ENSMUSP00000113326	TRANSLATION	protein_coding	-	CCDS29313.1	1	517	15	6.85	2.7	309.1	1	0,1	-	-	18	PRINCIPAL:1
ENSMUSG00000041891	Lman1	ENSMUST00000236070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041891	Lman1	ENSMUST00000150133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041891	Lman1	ENSMUST00000143990	ENSMUSP00000116433	TRANSLATION	protein_coding	stop	-	5	289	15	5.85	0	276.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041891	Lman1	ENSMUST00000048260	ENSMUSP00000040140	TRANSLATION	protein_coding	-	CCDS29313.1	1	517	15	6.85	2.7	309.1	1	0,1	-	-	18	PRINCIPAL:1
ENSMUSG00000024388	Myo7b	ENSMUST00000238990	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024388	Myo7b	ENSMUST00000134663	ENSMUSP00000118046	TRANSLATION	protein_coding	-	CCDS50244.1	1	2113	16	32.657	0.5	1130.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063889	Crem	ENSMUST00000144496	ENSMUSP00000120349	TRANSLATION	protein_coding	-	-	5	280	0	3.4	6.3	142.1	0	-4,-5	-	-	14.409	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000126578	ENSMUSP00000114780	TRANSLATION	protein_coding	-	-	5	304	0	3.4	6.3	138.2	0	-4,-1	-	-	14.175	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000154470	ENSMUSP00000118128	TRANSLATION	protein_coding	-	CCDS70863.1	5	282	0	3.4	7.6	138.2	0	-4,-2	-	-	14.766	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000049942	ENSMUSP00000061925	TRANSLATION	protein_coding	-	CCDS79585.1	2	119	0	1.8	1.5	71.4	0	-4,-5	-	-	4.788	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000124747	ENSMUSP00000121352	TRANSLATION	protein_coding	-	CCDS79584.1	2	102	0	1.8	3.9	71.4	0	-4,-6	-	-	5.877	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000151311	ENSMUSP00000118267	TRANSLATION	protein_coding	-	-	5	296	0	3.4	7.6	142.1	0	-4,-1	-	-	15	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000130599	ENSMUSP00000115471	TRANSLATION	protein_coding	start	-	5	229	0	3.4	1.2	142.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000140912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063889	Crem	ENSMUST00000082141	ENSMUSP00000080780	TRANSLATION	protein_coding	-	CCDS70862.1	5	308	0	3.4	6.3	138.2	0	-4,-1	-	-	14.175	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000025069	ENSMUSP00000025069	TRANSLATION	protein_coding	-	CCDS70864.1	5	345	0	3.4	6.4	138.2	0	-4,-2	-	-	14.22	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000151084	ENSMUSP00000118578	TRANSLATION	protein_coding	-	CCDS50209.2	1	113	0	1.8	5.1	71.4	0	-4,-5	-	-	6.423	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000132334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063889	Crem	ENSMUST00000139537	ENSMUSP00000122123	TRANSLATION	protein_coding	-	-	2	95	0	1.8	0	71.4	0	-4,-2	-	-	4.56	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000156929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063889	Crem	ENSMUST00000134027	ENSMUSP00000122557	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000130455	ENSMUSP00000121541	TRANSLATION	protein_coding	start	-	1	335	0	3.4	0	138.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000140332	ENSMUSP00000115423	TRANSLATION	protein_coding	-	-	5	108	0	1.8	5.7	75.3	0	-4,-5	-	-	6.93	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000150235	ENSMUSP00000121233	TRANSLATION	protein_coding	-	CCDS50215.1	5	357	0	3.4	7.5	142.1	0	-4,-2	-	-	14.955	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000154135	ENSMUSP00000122051	TRANSLATION	protein_coding	-	CCDS29031.2	5	245	0	3.4	5.1	138.2	0	-4,-1	-	-	13.629	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000152900	ENSMUSP00000123515	TRANSLATION	protein_coding	start	-	1	298	0	3.4	0	138.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000123672	ENSMUSP00000120557	TRANSLATION	protein_coding	start	-	5	217	0	3.4	2.4	142.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000149266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063889	Crem	ENSMUST00000142690	ENSMUSP00000122282	TRANSLATION	protein_coding	-	CCDS50213.1	1	173	0	1.6	0.5	66.8	0	-4,-6	-	-	3.882	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000136961	ENSMUSP00000115363	TRANSLATION	protein_coding	-	-	5	268	0	3.4	6.3	142.1	0	-4,-5	-	-	14.409	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000146265	ENSMUSP00000119638	TRANSLATION	protein_coding	start	-	1	272	0	3.4	0	142.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000165086	ENSMUSP00000127353	TRANSLATION	protein_coding	-	CCDS50214.1	5	294	0	3.4	5.1	138.2	0	-4,-2	-	-	13.629	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000148305	ENSMUSP00000115938	TRANSLATION	nonsense_mediated_decay	start	-	5	72	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000147138	ENSMUSP00000114280	TRANSLATION	protein_coding	-	-	5	120	0	1.8	2.4	75.3	0	-4,-5	-	-	5.43	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000154705	ENSMUSP00000119194	TRANSLATION	protein_coding	-	CCDS50210.2	1	125	0	1.8	3.9	71.4	0	-4,-5	-	-	5.877	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000129435	ENSMUSP00000117438	TRANSLATION	protein_coding	-	-	5	243	0	3.4	2.4	142.1	0	-4,-5	-	-	12.636	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000127601	ENSMUSP00000118649	TRANSLATION	protein_coding	start	-	5	331	0	3.4	1.3	142.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000149803	ENSMUSP00000121210	TRANSLATION	protein_coding	-	CCDS50212.1	1	124	0	1.6	0.5	66.8	0	-4,-6	-	-	3.882	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000122958	ENSMUSP00000121118	TRANSLATION	protein_coding	-	CCDS50211.1	1	304	0	3.4	6.3	142.1	0	-4,-1	-	-	14.409	PRINCIPAL:3
ENSMUSG00000063889	Crem	ENSMUST00000137568	ENSMUSP00000115336	TRANSLATION	protein_coding	start	-	1	223	0	3.4	0	138.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000156234	ENSMUSP00000121388	TRANSLATION	protein_coding	start	-	5	341	0	3.4	3.9	138.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000154715	ENSMUSP00000122179	TRANSLATION	protein_coding	-	-	5	329	0	3.4	6.3	138.2	0	-4,-5	-	-	14.175	ALTERNATIVE:1
ENSMUSG00000063889	Crem	ENSMUST00000131899	ENSMUSP00000119353	TRANSLATION	protein_coding	start	-	1	284	0	3.4	0	138.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000152108	ENSMUSP00000122241	TRANSLATION	protein_coding	-	-	5	217	0	3.4	0	142.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000063889	Crem	ENSMUST00000130047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024614	Tmx3	ENSMUST00000235132	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024614	Tmx3	ENSMUST00000236213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024614	Tmx3	ENSMUST00000235634	ENSMUSP00000158263	TRANSLATION	protein_coding	-	-	-	372	4	5.815	0	171.7	0	2,-2	-	-	16	ALTERNATIVE:2
ENSMUSG00000024614	Tmx3	ENSMUST00000236602	ENSMUSP00000157738	TRANSLATION	nonsense_mediated_decay	start	-	-	54	0	0.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024614	Tmx3	ENSMUST00000237852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024614	Tmx3	ENSMUST00000236081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024614	Tmx3	ENSMUST00000025515	ENSMUSP00000025515	TRANSLATION	protein_coding	-	CCDS37879.1	1	456	4	5.515	0.5	171.7	0	2,-2	-	-	15.4	PRINCIPAL:2
ENSMUSG00000024614	Tmx3	ENSMUST00000235708	ENSMUSP00000157665	TRANSLATION	protein_coding	stop	-	-	33	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049090	Zadh2	ENSMUST00000235383	ENSMUSP00000158299	TRANSLATION	protein_coding	-	-	-	254	23	1	5.3	97.9	0	-4,-6	-	-	14.288	MINOR
ENSMUSG00000049090	Zadh2	ENSMUST00000060223	ENSMUSP00000052544	TRANSLATION	protein_coding	-	CCDS29381.1	1	377	25	3	6.3	97.9	0	-4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000036743	Psma8	ENSMUST00000234177	ENSMUSP00000157309	TRANSLATION	nonsense_mediated_decay	-	-	-	35	1	1	0	57.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036743	Psma8	ENSMUST00000234869	ENSMUSP00000157105	TRANSLATION	nonsense_mediated_decay	-	-	-	53	0	1	0	57.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036743	Psma8	ENSMUST00000234318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036743	Psma8	ENSMUST00000040860	ENSMUSP00000042590	TRANSLATION	protein_coding	-	CCDS50226.1	1	250	4	6.55	1.5	275.2	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000036743	Psma8	ENSMUST00000234922	ENSMUSP00000156989	TRANSLATION	nonsense_mediated_decay	-	-	-	63	1	1	0	57.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036743	Psma8	ENSMUST00000235037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036743	Psma8	ENSMUST00000234680	ENSMUSP00000157022	TRANSLATION	protein_coding	-	-	-	210	4	5.55	0.5	233.1	0	-4,-7	-	-	11.476	MINOR
ENSMUSG00000052026	Slc6a7	ENSMUST00000025520	ENSMUSP00000025520	TRANSLATION	protein_coding	-	CCDS29278.1	1	637	9	11.16	5.1	762.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000052026	Slc6a7	ENSMUST00000236893	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024353	Mzb1	ENSMUST00000025211	ENSMUSP00000025211	TRANSLATION	protein_coding	-	CCDS29145.1	1	188	0	0	1.5	35.2	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024353	Mzb1	ENSMUST00000237462	ENSMUSP00000157781	TRANSLATION	protein_coding	start	-	-	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024353	Mzb1	ENSMUST00000235707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025421	Hdhd2	ENSMUST00000097522	ENSMUSP00000095129	TRANSLATION	protein_coding	-	CCDS37863.1	1	259	11	5.5	18.2	134.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025421	Hdhd2	ENSMUST00000148955	ENSMUSP00000116243	TRANSLATION	protein_coding	-	CCDS37863.1	5	259	11	5.5	18.2	134.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025421	Hdhd2	ENSMUST00000150990	ENSMUSP00000114212	TRANSLATION	protein_coding	-	CCDS37863.1	5	259	11	5.5	18.2	134.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025421	Hdhd2	ENSMUST00000145634	ENSMUSP00000123320	TRANSLATION	protein_coding	-	CCDS37863.1	5	259	11	5.5	18.2	134.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025421	Hdhd2	ENSMUST00000026485	ENSMUSP00000026485	TRANSLATION	protein_coding	-	CCDS37863.1	1	259	11	5.5	18.2	134.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025421	Hdhd2	ENSMUST00000097521	ENSMUSP00000095128	TRANSLATION	protein_coding	-	CCDS37864.1	1	146	8	2.93	0.5	69.7	0	-4,-7	-	-	6.966	MINOR
ENSMUSG00000024260	Sap130	ENSMUST00000235017	ENSMUSP00000157127	TRANSLATION	protein_coding	-	-	-	1057	0	0	7.5	753	0	-4,-2	-	-	9	ALTERNATIVE:1
ENSMUSG00000024260	Sap130	ENSMUST00000234461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024260	Sap130	ENSMUST00000234846	ENSMUSP00000157213	TRANSLATION	protein_coding	stop	-	-	115	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024260	Sap130	ENSMUST00000234760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024260	Sap130	ENSMUST00000178164	ENSMUSP00000136842	TRANSLATION	protein_coding	-	-	5	1057	0	0	7.5	740.2	0	-4,-2	-	-	8.232	ALTERNATIVE:1
ENSMUSG00000024260	Sap130	ENSMUST00000234772	ENSMUSP00000157074	TRANSLATION	protein_coding	stop	-	-	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024260	Sap130	ENSMUST00000025109	ENSMUSP00000025109	TRANSLATION	protein_coding	-	CCDS57117.1	1	1056	0	0	7.5	753	0	-4,-2	-	-	9	PRINCIPAL:2
ENSMUSG00000024260	Sap130	ENSMUST00000234769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024560	Cxxc1	ENSMUST00000236679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024560	Cxxc1	ENSMUST00000025444	ENSMUSP00000025444	TRANSLATION	protein_coding	-	CCDS50320.1	1	660	8	3.21	3.9	451	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024560	Cxxc1	ENSMUST00000236663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024560	Cxxc1	ENSMUST00000238037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024560	Cxxc1	ENSMUST00000238176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073599	Ecscr	ENSMUST00000235163	ENSMUSP00000158197	TRANSLATION	nonsense_mediated_decay	-	-	-	190	0	0	0	128.2	2	1,-2	-	-	-1	MINOR
ENSMUSG00000073599	Ecscr	ENSMUST00000124237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073599	Ecscr	ENSMUST00000133064	ENSMUSP00000118628	TRANSLATION	protein_coding	-	-	2	235	0	0	0	188.5	2	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000073599	Ecscr	ENSMUST00000123973	ENSMUSP00000118479	TRANSLATION	protein_coding	start	-	3	159	0	0	0	124.9	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000073599	Ecscr	ENSMUST00000143684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073599	Ecscr	ENSMUST00000097618	ENSMUSP00000095223	TRANSLATION	protein_coding	-	CCDS37763.1	1	230	0	0	0.5	188.5	2	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000073599	Ecscr	ENSMUST00000134656	ENSMUSP00000116109	TRANSLATION	protein_coding	start	-	3	166	0	0	0	124.9	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000073572	Gm10542	ENSMUST00000097586	ENSMUSP00000095193	TRANSLATION	protein_coding	start	-	5	90	0	1.04	0	42.5	0	-2,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000024505	Dtwd2	ENSMUST00000237137	ENSMUSP00000157640	TRANSLATION	nonsense_mediated_decay	-	-	-	137	0	0	0	48	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024505	Dtwd2	ENSMUST00000139852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024505	Dtwd2	ENSMUST00000025383	ENSMUSP00000025383	TRANSLATION	protein_coding	-	CCDS50286.1	1	202	0	0	0.5	38.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024505	Dtwd2	ENSMUST00000163590	ENSMUSP00000128219	TRANSLATION	protein_coding	-	CCDS37815.1	1	298	0	0	3.9	148.3	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000047033	Pcdhb15	ENSMUST00000050034	ENSMUSP00000059598	TRANSLATION	protein_coding	-	CCDS29181.1	-	786	54	0.8	0.5	449.5	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051401	Kctd16	ENSMUST00000237456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051401	Kctd16	ENSMUST00000237805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051401	Kctd16	ENSMUST00000236889	ENSMUSP00000158201	TRANSLATION	protein_coding	-	CCDS50264.1	-	427	0	1	7.5	58.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000051401	Kctd16	ENSMUST00000096572	ENSMUSP00000094323	TRANSLATION	protein_coding	-	-	-	140	0	0	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000051401	Kctd16	ENSMUST00000091927	ENSMUSP00000089547	TRANSLATION	protein_coding	-	CCDS50264.1	1	427	0	1	7.5	58.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000051401	Kctd16	ENSMUST00000237764	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051401	Kctd16	ENSMUST00000238039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051401	Kctd16	ENSMUST00000236525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051401	Kctd16	ENSMUST00000235241	ENSMUSP00000158332	TRANSLATION	protein_coding	start	-	-	138	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051401	Kctd16	ENSMUST00000236301	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036412	Arsi	ENSMUST00000040359	ENSMUSP00000043966	TRANSLATION	protein_coding	-	CCDS29275.1	1	573	10	1.6	3.9	238.7	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000038128	Camk4	ENSMUST00000234654	ENSMUSP00000157216	TRANSLATION	nonsense_mediated_decay	-	-	-	469	18	8.44	0.5	262.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038128	Camk4	ENSMUST00000234001	ENSMUSP00000157088	TRANSLATION	protein_coding	stop	-	-	67	6	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038128	Camk4	ENSMUST00000042868	ENSMUSP00000046539	TRANSLATION	protein_coding	-	CCDS29122.1	1	469	18	8.44	0.5	262.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038128	Camk4	ENSMUST00000234205	ENSMUSP00000157012	TRANSLATION	nonsense_mediated_decay	-	-	-	469	18	8.44	0.5	262.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039954	Stk32a	ENSMUST00000235682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039954	Stk32a	ENSMUST00000237797	ENSMUSP00000158482	TRANSLATION	protein_coding	-	-	-	368	17	10	0	171.9	0	-4,-5	-	-	11.49	MINOR
ENSMUSG00000039954	Stk32a	ENSMUST00000045477	ENSMUSP00000038471	TRANSLATION	protein_coding	-	CCDS29218.1	1	398	19	11	2.7	224.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000039954	Stk32a	ENSMUST00000236899	ENSMUSP00000158223	TRANSLATION	protein_coding	start	-	-	108	5	2	0	61.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036225	Kctd1	ENSMUST00000234685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036225	Kctd1	ENSMUST00000168989	ENSMUSP00000128070	TRANSLATION	protein_coding	-	CCDS50228.1	1	861	0	2.8	2.7	165.5	0	-4,-6	-	-	12.672	PRINCIPAL:1
ENSMUSG00000036225	Kctd1	ENSMUST00000234864	ENSMUSP00000157005	TRANSLATION	protein_coding	stop	-	-	180	0	2.8	0	64	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000036225	Kctd1	ENSMUST00000234221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036225	Kctd1	ENSMUST00000025992	ENSMUSP00000025992	TRANSLATION	protein_coding	-	CCDS50229.1	1	265	0	2.8	8.6	64	0	-4,-2	-	-	9	MINOR
ENSMUSG00000036225	Kctd1	ENSMUST00000233993	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024304	Cdh2	ENSMUST00000025166	ENSMUSP00000025166	TRANSLATION	protein_coding	-	CCDS29076.1	1	906	58	15.1	8.8	575.1	1	2,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000024304	Cdh2	ENSMUST00000152779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024304	Cdh2	ENSMUST00000115850	ENSMUSP00000111516	TRANSLATION	protein_coding	-	-	5	849	58	13.5	0	534.1	1	-4,-7	-	-	12.342	MINOR
ENSMUSG00000024556	Me2	ENSMUST00000235595	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024556	Me2	ENSMUST00000237619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024556	Me2	ENSMUST00000025439	ENSMUSP00000025439	TRANSLATION	protein_coding	-	CCDS29339.1	1	589	43	14.5	0.5	582.8	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024556	Me2	ENSMUST00000236922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038524	Fchsd1	ENSMUST00000164222	ENSMUSP00000128481	TRANSLATION	nonsense_mediated_decay	-	-	2	57	0	0.9	0	39.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038524	Fchsd1	ENSMUST00000043437	ENSMUSP00000047878	TRANSLATION	protein_coding	-	CCDS37786.1	1	688	0	6.195	7.5	135.7	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000038524	Fchsd1	ENSMUST00000168136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038524	Fchsd1	ENSMUST00000168816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038524	Fchsd1	ENSMUST00000166727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038524	Fchsd1	ENSMUST00000166973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038524	Fchsd1	ENSMUST00000163131	ENSMUSP00000133058	TRANSLATION	protein_coding	stop	-	3	137	0	2.1	0	65.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000038524	Fchsd1	ENSMUST00000166148	ENSMUSP00000129825	TRANSLATION	protein_coding	stop	-	2	108	0	1.55	0	64	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000038524	Fchsd1	ENSMUST00000171253	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038524	Fchsd1	ENSMUST00000165643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118407	Gm50457	ENSMUST00000238707	ENSMUSP00000158848	TRANSLATION	protein_coding	-	-	-	323	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036223	Ska1	ENSMUST00000177604	ENSMUSP00000137357	TRANSLATION	protein_coding	-	CCDS29341.1	1	254	0	5.55	1.5	282.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036223	Ska1	ENSMUST00000237276	ENSMUSP00000157837	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	1.75	0	37.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036223	Ska1	ENSMUST00000040188	ENSMUSP00000049156	TRANSLATION	protein_coding	-	CCDS29341.1	1	254	0	5.55	1.5	282.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000007480	Mc5r	ENSMUST00000172148	ENSMUSP00000130497	TRANSLATION	protein_coding	-	-	1	325	0	0.36	1	112	7	-4,-7	-	-	9.27	MINOR
ENSMUSG00000007480	Mc5r	ENSMUST00000239469	ENSMUSP00000159315	TRANSLATION	protein_coding	-	CCDS29327.1	-	372	0	0.66	0.5	112	7	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024503	Spink1	ENSMUST00000025381	ENSMUSP00000025381	TRANSLATION	protein_coding	-	CCDS37803.1	1	80	0	1.632	1.7	65.8	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024286	Ccny	ENSMUST00000234102	ENSMUSP00000157340	TRANSLATION	protein_coding	-	-	-	316	0	0	1.2	54.7	0	-4,-2	-	-	6.06	MINOR
ENSMUSG00000024286	Ccny	ENSMUST00000234382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024286	Ccny	ENSMUST00000234844	ENSMUSP00000157086	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024286	Ccny	ENSMUST00000053917	ENSMUSP00000050001	TRANSLATION	protein_coding	-	CCDS29050.1	1	341	0	0	14.3	54.7	0	-4,-2	-	-	10	PRINCIPAL:1
ENSMUSG00000024286	Ccny	ENSMUST00000234779	ENSMUSP00000157353	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050945	Zfp438	ENSMUST00000234411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050945	Zfp438	ENSMUST00000234241	ENSMUSP00000156983	TRANSLATION	protein_coding	-	CCDS37721.1	-	798	16	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050945	Zfp438	ENSMUST00000063989	ENSMUSP00000067049	TRANSLATION	protein_coding	-	CCDS37721.1	1	798	16	0	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059040	Eno1b	ENSMUST00000076155	ENSMUSP00000075513	TRANSLATION	protein_coding	-	CCDS50285.1	1	434	14	1	19.5	721.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000059040	Eno1b	ENSMUST00000235307	ENSMUSP00000157807	TRANSLATION	protein_coding	-	CCDS50285.1	-	434	14	1	19.5	721.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000117694	Snhg4	ENSMUST00000235176	ENSMUSP00000157406	TRANSLATION	protein_coding,RT	stop	-	-	87	0	0	0	0	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000117694	Snhg4	ENSMUST00000235801	ENSMUSP00000157599	TRANSLATION	protein_coding,RT	stop	-	-	12	0	0	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000117694	Snhg4	ENSMUST00000235585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117694	Snhg4	ENSMUST00000237907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117694	Snhg4	ENSMUST00000236097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117694	Snhg4	ENSMUST00000237592	ENSMUSP00000157844	TRANSLATION	protein_coding,RT	stop	-	-	403	0	4.3	0	29.4	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000117694	Snhg4	ENSMUST00000237589	ENSMUSP00000158147	TRANSLATION	protein_coding,RT	stop	-	-	102	0	1.3	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000117694	Snhg4	ENSMUST00000237230	ENSMUSP00000157560	TRANSLATION	protein_coding,RT	stop	-	-	61	0	0	0	0	0	-4,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000103088	Pcdhgb6	ENSMUST00000003599	ENSMUSP00000003599	TRANSLATION	protein_coding	-	CCDS50259.1	1	930	53	0.8	0.5	504.1	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000032735	Ablim3	ENSMUST00000166783	ENSMUSP00000125836	TRANSLATION	protein_coding	-	CCDS37839.1	1	682	30	8.87	11.5	715.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000032735	Ablim3	ENSMUST00000049378	ENSMUSP00000041243	TRANSLATION	protein_coding	-	CCDS37839.1	1	682	30	8.87	11.5	715.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000051469	Zfp24	ENSMUST00000066497	ENSMUSP00000064637	TRANSLATION	protein_coding	-	CCDS29098.1	1	368	16	1.8	7.5	237.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000051469	Zfp24	ENSMUST00000148525	ENSMUSP00000114282	TRANSLATION	protein_coding	stop	-	2	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051469	Zfp24	ENSMUST00000153337	ENSMUSP00000122579	TRANSLATION	protein_coding	-	CCDS29098.1	1	368	16	1.8	7.5	237.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000073598	1700066B19Rik	ENSMUST00000143778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073598	1700066B19Rik	ENSMUST00000097617	ENSMUSP00000095222	TRANSLATION	protein_coding	-	CCDS50252.1	1	127	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000024592	C330018D20Rik	ENSMUST00000025488	ENSMUSP00000025488	TRANSLATION	protein_coding	-	CCDS50293.1	1	115	10	2.5	3.5	0	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000024592	C330018D20Rik	ENSMUST00000152087	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024592	C330018D20Rik	ENSMUST00000139243	ENSMUSP00000116181	TRANSLATION	protein_coding	-	CCDS50293.1	3	115	10	2.5	3.5	0	0	-4,0	-	-	13	PRINCIPAL:1
ENSMUSG00000061802	Armc4	ENSMUST00000081275	ENSMUSP00000080028	TRANSLATION	protein_coding	-	CCDS37729.1	5	1037	0	7	0.5	50.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061802	Armc4	ENSMUST00000234788	ENSMUSP00000157197	TRANSLATION	protein_coding	-	CCDS37729.1	-	1037	0	7	0.5	50.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000061802	Armc4	ENSMUST00000234458	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061802	Armc4	ENSMUST00000234196	ENSMUSP00000157290	TRANSLATION	protein_coding	stop	-	-	149	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061802	Armc4	ENSMUST00000234281	ENSMUSP00000157131	TRANSLATION	protein_coding	stop	-	-	92	0	1.2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061802	Armc4	ENSMUST00000235068	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046318	Ccbe1	ENSMUST00000061103	ENSMUSP00000052011	TRANSLATION	nonsense_mediated_decay	-	-	1	408	7	1.16	6.3	68.1	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000046318	Ccbe1	ENSMUST00000235872	ENSMUSP00000157925	TRANSLATION	protein_coding	start	-	-	114	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046318	Ccbe1	ENSMUST00000151343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046318	Ccbe1	ENSMUST00000236848	ENSMUSP00000157891	TRANSLATION	nonsense_mediated_decay	-	-	-	93	0	0	0	0	0	-1,-3	-	-	-1	MINOR
ENSMUSG00000046318	Ccbe1	ENSMUST00000146610	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046318	Ccbe1	ENSMUST00000236402	ENSMUSP00000157390	TRANSLATION	protein_coding	-	-	-	75	0	0	0	0	0	-1,-3	-	-	0	MINOR
ENSMUSG00000046318	Ccbe1	ENSMUST00000130300	ENSMUSP00000117636	TRANSLATION	protein_coding	-	CCDS29314.1	1	408	7	1.16	6.3	68.1	0	-1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000037346	Hrh4	ENSMUST00000041676	ENSMUSP00000041061	TRANSLATION	protein_coding	-	CCDS29069.1	1	391	0	2.16	1.5	192.1	9	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037346	Hrh4	ENSMUST00000234084	ENSMUSP00000157228	TRANSLATION	protein_coding	-	-	-	67	0	0.8	0	33.3	2	-3,-6	-	-	2.22	MINOR
ENSMUSG00000037346	Hrh4	ENSMUST00000234565	ENSMUSP00000157130	TRANSLATION	protein_coding	-	-	-	141	0	1.95	0.5	94	5	-3,-5	-	-	5.532	MINOR
ENSMUSG00000032688	Malt1	ENSMUST00000225085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000235209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000237488	ENSMUSP00000158079	TRANSLATION	nonsense_mediated_decay	start	-	-	170	0	3.46	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032688	Malt1	ENSMUST00000236050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000225659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000235999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000236314	ENSMUSP00000158449	TRANSLATION	nonsense_mediated_decay	start	-	-	98	0	1.43	0	32.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032688	Malt1	ENSMUST00000236284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032688	Malt1	ENSMUST00000224229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000237739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032688	Malt1	ENSMUST00000224265	ENSMUSP00000158550	TRANSLATION	nonsense_mediated_decay	-	-	-	342	0	6.26	0	97	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032688	Malt1	ENSMUST00000049248	ENSMUSP00000048376	TRANSLATION	protein_coding	-	CCDS29306.1	1	821	0	13.61	1.5	159.4	0	-4,-2	-	-	11.736	PRINCIPAL:2
ENSMUSG00000032688	Malt1	ENSMUST00000224056	ENSMUSP00000153585	TRANSLATION	protein_coding	-	-	-	832	0	13.742	1.5	159.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000033107	Rnf125	ENSMUST00000234316	ENSMUSP00000157304	TRANSLATION	protein_coding	-	-	-	233	21	6.25	8.8	83.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000033107	Rnf125	ENSMUST00000050004	ENSMUSP00000058251	TRANSLATION	protein_coding	-	CCDS29088.1	1	140	13	4.25	0.5	40.9	0	-4,-5	-	-	5.616	MINOR
ENSMUSG00000024454	Hdac3	ENSMUST00000144471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024454	Hdac3	ENSMUST00000043498	ENSMUSP00000037981	TRANSLATION	protein_coding	-	CCDS37785.1	1	428	3	11.21	17.5	266.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024454	Hdac3	ENSMUST00000235700	ENSMUSP00000157755	TRANSLATION	nonsense_mediated_decay	-	-	-	75	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024454	Hdac3	ENSMUST00000236756	ENSMUSP00000158234	TRANSLATION	nonsense_mediated_decay	-	-	-	120	0	1.58	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024454	Hdac3	ENSMUST00000153945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024454	Hdac3	ENSMUST00000143660	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033323	Ctdp1	ENSMUST00000161003	ENSMUSP00000123705	TRANSLATION	protein_coding	-	-	1	172	0	1.6	0	265.6	0	-4,-6	-	-	0	MINOR
ENSMUSG00000033323	Ctdp1	ENSMUST00000160434	ENSMUSP00000157414	TRANSLATION	protein_coding	-	-	3	155	0	1.6	0	245	0	-4,-5	-	-	0	MINOR
ENSMUSG00000033323	Ctdp1	ENSMUST00000036229	ENSMUSP00000038938	TRANSLATION	protein_coding	-	CCDS29368.1	1	960	3	4.9	0.5	499.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041258	Zfp236	ENSMUST00000182122	ENSMUSP00000138557	TRANSLATION	protein_coding	-	-	1	1847	120	9.62	1.5	431.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041258	Zfp236	ENSMUST00000183324	ENSMUSP00000138434	TRANSLATION	nonsense_mediated_decay	start	-	1	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041258	Zfp236	ENSMUST00000182759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041258	Zfp236	ENSMUST00000182866	ENSMUSP00000138344	TRANSLATION	protein_coding	stop	-	3	429	36	3.14	0	149.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041258	Zfp236	ENSMUST00000171071	ENSMUSP00000130004	TRANSLATION	protein_coding	-	CCDS50337.1	1	1799	116	9.3	0.5	413.5	0	-4,-5	-	-	13.59	MINOR
ENSMUSG00000041258	Zfp236	ENSMUST00000183048	ENSMUSP00000138179	TRANSLATION	nonsense_mediated_decay	-	-	1	485	36	3.14	0	149.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041258	Zfp236	ENSMUST00000225002	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038791	Scgb3a2	ENSMUST00000043803	ENSMUSP00000038872	TRANSLATION	protein_coding	-	-	1	139	0	0	0.5	50.7	0	0,-4	-	-	5.904	MINOR
ENSMUSG00000038791	Scgb3a2	ENSMUST00000187157	ENSMUSP00000140476	TRANSLATION	protein_coding	-	CCDS79640.1	1	91	0	0	5.1	42.4	0	0,-4	-	-	6.938	PRINCIPAL:1
ENSMUSG00000038791	Scgb3a2	ENSMUST00000189750	ENSMUSP00000140375	TRANSLATION	protein_coding	-	CCDS79641.1	1	113	0	0	0.5	51.5	0	0,-4	-	-	6	MINOR
ENSMUSG00000024583	Txnl1	ENSMUST00000236892	ENSMUSP00000158344	TRANSLATION	protein_coding	start	-	-	91	0	1.816	0	72.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024583	Txnl1	ENSMUST00000236253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024583	Txnl1	ENSMUST00000235749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024583	Txnl1	ENSMUST00000237331	ENSMUSP00000158527	TRANSLATION	protein_coding	-	-	-	243	0	5.25	0	170.1	0	-4,-5	-	-	7.14	MINOR
ENSMUSG00000024583	Txnl1	ENSMUST00000237004	ENSMUSP00000158375	TRANSLATION	protein_coding	-	CCDS29297.1	-	289	0	6.75	21.5	201.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024583	Txnl1	ENSMUST00000025476	ENSMUSP00000025476	TRANSLATION	protein_coding	-	-	1	292	0	6.75	7.1	201.1	0	-4,-5	-	-	13.192	MINOR
ENSMUSG00000024583	Txnl1	ENSMUST00000235537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024583	Txnl1	ENSMUST00000238061	ENSMUSP00000157498	TRANSLATION	protein_coding	-	-	-	259	0	5.75	0	192.4	0	-4,-6	-	-	9.48	MINOR
ENSMUSG00000045062	Pcdhb7	ENSMUST00000053037	ENSMUSP00000051041	TRANSLATION	protein_coding	-	CCDS50257.1	-	829	55	0.8	0.5	439.5	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000073639	Rab18	ENSMUST00000234810	ENSMUSP00000157011	TRANSLATION	protein_coding	-	CCDS29044.1	-	206	23	5.5	14.1	194.2	0	-4,-6	-	-	21.472	PRINCIPAL:1
ENSMUSG00000073639	Rab18	ENSMUST00000097680	ENSMUSP00000095285	TRANSLATION	protein_coding	-	-	1	194	23	3.87	0	156.9	0	-4,-6	-	-	11.976	MINOR
ENSMUSG00000073639	Rab18	ENSMUST00000234626	ENSMUSP00000157198	TRANSLATION	protein_coding	-	-	-	212	23	5.764	0.5	182.7	0	-4,-6	-	-	17.31	MINOR
ENSMUSG00000073639	Rab18	ENSMUST00000234720	ENSMUSP00000157334	TRANSLATION	nonsense_mediated_decay	-	-	-	41	7	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073639	Rab18	ENSMUST00000234356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053861	Gm9925	ENSMUST00000066583	ENSMUSP00000063723	TRANSLATION	protein_coding	start	-	-	160	0	0	0	0	0	-3,1	-	-	-1	PRINCIPAL:1
ENSMUSG00000024378	Stard4	ENSMUST00000141617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024378	Stard4	ENSMUST00000119991	ENSMUSP00000114109	TRANSLATION	protein_coding	-	CCDS84369.1	5	146	0	3	0.5	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000024378	Stard4	ENSMUST00000118990	ENSMUSP00000114131	TRANSLATION	protein_coding	-	-	2	111	0	3	0	0	0	-4,-5	-	-	1.998	MINOR
ENSMUSG00000024378	Stard4	ENSMUST00000025236	ENSMUSP00000025236	TRANSLATION	protein_coding	-	CCDS29123.1	1	224	0	5	1.5	66.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024487	Yipf5	ENSMUST00000025364	ENSMUSP00000025364	TRANSLATION	protein_coding	-	CCDS29207.1	1	257	0	0	10.8	38.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024487	Yipf5	ENSMUST00000236741	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024487	Yipf5	ENSMUST00000237176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024233	Lyzl1	ENSMUST00000120837	ENSMUSP00000113101	TRANSLATION	protein_coding	-	-	3	99	2	2.35	0	107	0	-4,-5	-	-	9.216	MINOR
ENSMUSG00000024233	Lyzl1	ENSMUST00000025076	ENSMUSP00000025076	TRANSLATION	protein_coding	-	CCDS29035.1	1	148	8	3.35	1.5	145.1	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000043313	Pcdhb19	ENSMUST00000059571	ENSMUSP00000053326	TRANSLATION	protein_coding	-	CCDS29185.1	-	801	54	0.8	0.5	437.4	0	-1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000037253	Mex3c	ENSMUST00000091852	ENSMUSP00000089463	TRANSLATION	protein_coding	-	CCDS50318.1	1	652	8	0.4	0.5	133.2	0	-1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000048410	Zfp407	ENSMUST00000125450	ENSMUSP00000138633	TRANSLATION	protein_coding	start	-	3	72	9	1.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048410	Zfp407	ENSMUST00000182849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048410	Zfp407	ENSMUST00000182297	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048410	Zfp407	ENSMUST00000143597	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048410	Zfp407	ENSMUST00000125763	ENSMUSP00000118361	TRANSLATION	protein_coding	-	CCDS50338.1	5	2246	77	5.05	0.5	38.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048410	Zfp407	ENSMUST00000156181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051732	Pabpc2	ENSMUST00000063219	ENSMUSP00000066639	TRANSLATION	protein_coding	-	CCDS29206.1	-	628	0	0.6	1.5	358.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023066	Rttn	ENSMUST00000237196	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023066	Rttn	ENSMUST00000235728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023066	Rttn	ENSMUST00000023828	ENSMUSP00000023828	TRANSLATION	protein_coding	-	CCDS29390.1	5	2226	0	0	0.5	114.9	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000023066	Rttn	ENSMUST00000236676	ENSMUSP00000158456	TRANSLATION	nonsense_mediated_decay	start	-	-	44	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023066	Rttn	ENSMUST00000235882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023066	Rttn	ENSMUST00000237640	ENSMUSP00000157632	TRANSLATION	nonsense_mediated_decay	start	-	-	123	0	0	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000023066	Rttn	ENSMUST00000236531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023066	Rttn	ENSMUST00000235272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023066	Rttn	ENSMUST00000235314	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023066	Rttn	ENSMUST00000236313	ENSMUSP00000157705	TRANSLATION	nonsense_mediated_decay	start	-	-	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102440	Pcdhga9	ENSMUST00000091935	ENSMUSP00000089555	TRANSLATION	protein_coding	-	CCDS37783.1	1	932	52	1	0.5	546.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000102440	Pcdhga9	ENSMUST00000194814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047989	Ino80c	ENSMUST00000153360	ENSMUSP00000114643	TRANSLATION	protein_coding	-	CCDS29099.1	1	191	0	0	3.9	42.4	0	-4,-7	-	-	6.763	PRINCIPAL:2
ENSMUSG00000047989	Ino80c	ENSMUST00000055012	ENSMUSP00000055342	TRANSLATION	protein_coding	-	-	5	231	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000047989	Ino80c	ENSMUST00000125169	ENSMUSP00000117684	TRANSLATION	protein_coding	-	-	3	134	0	0	4.8	42.4	0	-4,-5	-	-	7	ALTERNATIVE:1
ENSMUSG00000047989	Ino80c	ENSMUST00000141489	ENSMUSP00000122372	TRANSLATION	protein_coding	-	-	1	94	0	0	0	28.7	0	-4,-7	-	-	4.062	MINOR
ENSMUSG00000036904	Fzd8	ENSMUST00000041080	ENSMUSP00000039660	TRANSLATION	protein_coding	-	CCDS29048.1	-	685	0	0.4	1.5	605.9	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000090264	Eif4ebp3	ENSMUST00000036765	ENSMUSP00000039298	TRANSLATION	protein_coding	-	CCDS29155.1	1	101	0	2	2.7	125.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000118193	Arhgap26	ENSMUST00000148850	ENSMUSP00000121894	TRANSLATION	protein_coding,RT	stop	-	3	170	0	0	0	104.3	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000041482	Piezo2	ENSMUST00000046860	ENSMUSP00000036099	TRANSLATION	protein_coding	start/stop	-	5	375	0	0	0	0	10	0,-4	-	-	-1	MINOR
ENSMUSG00000041482	Piezo2	ENSMUST00000182233	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041482	Piezo2	ENSMUST00000047480	ENSMUSP00000040019	TRANSLATION	protein_coding	-	CCDS29296.2	1	2824	0	9.58	0.5	876.2	26	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000041482	Piezo2	ENSMUST00000235366	ENSMUSP00000158292	TRANSLATION	protein_coding	start/stop	-	-	230	0	0	0	0	5	-1,-5	-	-	-1	MINOR
ENSMUSG00000041482	Piezo2	ENSMUST00000236438	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041482	Piezo2	ENSMUST00000238051	ENSMUSP00000157827	TRANSLATION	protein_coding	-	-	-	2778	0	9.58	0	876.2	26	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000041482	Piezo2	ENSMUST00000137141	ENSMUSP00000117107	TRANSLATION	nonsense_mediated_decay	start	-	1	409	0	6.8	0	253.5	6	-4,-2	-	-	-1	MINOR
ENSMUSG00000041482	Piezo2	ENSMUST00000183217	ENSMUSP00000138758	TRANSLATION	protein_coding	-	-	5	2753	0	9.58	0.5	876.2	26	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000041482	Piezo2	ENSMUST00000235659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041482	Piezo2	ENSMUST00000132576	ENSMUSP00000157610	TRANSLATION	protein_coding	start	-	1	378	0	7.4	0	276.6	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000041482	Piezo2	ENSMUST00000237812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041482	Piezo2	ENSMUST00000123322	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041482	Piezo2	ENSMUST00000182166	ENSMUSP00000138754	TRANSLATION	protein_coding	-	-	5	644	0	0	0	0	11	1,-3	-	-	0	MINOR
ENSMUSG00000041482	Piezo2	ENSMUST00000182177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041482	Piezo2	ENSMUST00000238156	ENSMUSP00000157601	TRANSLATION	protein_coding	-	-	-	2690	0	8.58	0	674	25	1,-3	-	-	4.002	MINOR
ENSMUSG00000090451	Gm6133	ENSMUST00000164064	ENSMUSP00000128489	TRANSLATION	protein_coding	-	-	-	190	0	1	0	138	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054008	Ndst1	ENSMUST00000237885	ENSMUSP00000157775	TRANSLATION	protein_coding	stop	-	-	96	0	0	0	30.4	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000054008	Ndst1	ENSMUST00000237572	ENSMUSP00000157512	TRANSLATION	protein_coding	start/stop	-	-	101	4	2	0	26.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054008	Ndst1	ENSMUST00000235795	ENSMUSP00000158439	TRANSLATION	protein_coding	-	-	-	185	0	0	0	103.1	2	-1,-5	-	-	0	MINOR
ENSMUSG00000054008	Ndst1	ENSMUST00000169273	ENSMUSP00000126623	TRANSLATION	protein_coding	-	CCDS37834.1	1	882	18	8	7.5	988.5	2	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054008	Ndst1	ENSMUST00000237783	ENSMUSP00000158312	TRANSLATION	protein_coding	-	CCDS37834.1	-	882	18	8	7.5	988.5	2	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054008	Ndst1	ENSMUST00000237070	ENSMUSP00000157852	TRANSLATION	protein_coding	stop	-	-	64	0	0	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000235093	ENSMUSP00000157048	TRANSLATION	protein_coding	-	-	-	392	0	7.925	0	179.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000234571	ENSMUSP00000157306	TRANSLATION	protein_coding	-	-	-	427	5	8.525	0.5	179.8	0	-4,-7	-	-	0	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000115869	ENSMUSP00000111535	TRANSLATION	protein_coding	-	CCDS50217.1	5	576	19	11.925	13	338.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000057440	Mpp7	ENSMUST00000234444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000234522	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057440	Mpp7	ENSMUST00000234510	ENSMUSP00000157260	TRANSLATION	nonsense_mediated_decay	-	-	-	321	0	6.975	1.7	179.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000234639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000234812	ENSMUSP00000157345	TRANSLATION	protein_coding	stop	-	-	354	0	6.975	0	179.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000234874	ENSMUSP00000157061	TRANSLATION	protein_coding	stop	-	-	104	0	2.9	0	49.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057440	Mpp7	ENSMUST00000233992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000234599	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000234210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000234366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057440	Mpp7	ENSMUST00000235095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024519	Cplx4	ENSMUST00000025397	ENSMUSP00000025397	TRANSLATION	protein_coding	-	CCDS29312.1	1	160	0	0	19.5	158.8	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024519	Cplx4	ENSMUST00000236894	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061144	Spink12	ENSMUST00000081271	ENSMUSP00000080025	TRANSLATION	protein_coding	-	-	1	87	0	1.698	1.2	58.9	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000061144	Spink12	ENSMUST00000239465	ENSMUSP00000159380	TRANSLATION	protein_coding	-	CCDS29225.1	-	105	0	1.698	0.5	58.9	0	-1,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000117942	Maskbp3	ENSMUST00000140061	ENSMUSP00000121811	TRANSLATION	protein_coding,RT	start	-	2	637	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000024566	Atp9b	ENSMUST00000235385	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000226064	ENSMUSP00000153535	TRANSLATION	protein_coding	stop	-	-	235	3	1.02	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024566	Atp9b	ENSMUST00000225692	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000225075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024566	Atp9b	ENSMUST00000225218	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024566	Atp9b	ENSMUST00000225205	ENSMUSP00000152986	TRANSLATION	nonsense_mediated_decay	-	-	-	380	1	2.055	0	68.1	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000024566	Atp9b	ENSMUST00000223926	ENSMUSP00000153640	TRANSLATION	nonsense_mediated_decay	start	-	-	163	1	1.71	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024566	Atp9b	ENSMUST00000237845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000225092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000225980	ENSMUSP00000153157	TRANSLATION	protein_coding	-	CCDS29370.1	-	1135	6	8.755	7.5	333.2	9	-4,-1	-	-	20.826	PRINCIPAL:1
ENSMUSG00000024566	Atp9b	ENSMUST00000224283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000091790	ENSMUSP00000089394	TRANSLATION	protein_coding	-	-	5	1146	6	8.755	3.9	336.1	9	-4,-1	-	-	19.338	MINOR
ENSMUSG00000024566	Atp9b	ENSMUST00000224709	ENSMUSP00000153394	TRANSLATION	nonsense_mediated_decay	start	-	-	78	0	0.36	0	68.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024566	Atp9b	ENSMUST00000225345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024566	Atp9b	ENSMUST00000225235	ENSMUSP00000152932	TRANSLATION	nonsense_mediated_decay	-	-	-	380	1	2.055	0	68.1	1	-4,-1	-	-	-1	MINOR
ENSMUSG00000005836	Gata6	ENSMUST00000234971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005836	Gata6	ENSMUST00000235081	ENSMUSP00000157128	TRANSLATION	protein_coding	stop	-	-	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005836	Gata6	ENSMUST00000231831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005836	Gata6	ENSMUST00000234512	ENSMUSP00000157117	TRANSLATION	protein_coding	stop	-	-	63	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005836	Gata6	ENSMUST00000047762	ENSMUSP00000041774	TRANSLATION	protein_coding	-	CCDS29059.1	1	589	8	3	1.5	308.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000005836	Gata6	ENSMUST00000234722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000235199	ENSMUSP00000158074	TRANSLATION	protein_coding	-	CCDS29142.1	-	846	7	4.33	6.3	27	0	-4,-2	-	-	19.724	PRINCIPAL:1
ENSMUSG00000037236	Matr3	ENSMUST00000237622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000237002	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000236507	ENSMUSP00000158302	TRANSLATION	protein_coding	-	-	-	508	3	4.33	2.4	28.3	0	-4,-5	-	-	15.102	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000166793	ENSMUSP00000125761	TRANSLATION	protein_coding	-	CCDS29142.1	1	846	7	4.33	6.3	27	0	-4,-2	-	-	19.724	PRINCIPAL:1
ENSMUSG00000037236	Matr3	ENSMUST00000237061	ENSMUSP00000157641	TRANSLATION	protein_coding	-	-	-	508	3	4.33	2.4	28.3	0	-4,-5	-	-	15.102	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000236327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000235551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000237744	ENSMUSP00000158537	TRANSLATION	protein_coding	-	CCDS29142.1	-	846	7	4.33	6.3	27	0	-4,-2	-	-	19.724	PRINCIPAL:1
ENSMUSG00000037236	Matr3	ENSMUST00000237018	ENSMUSP00000157751	TRANSLATION	nonsense_mediated_decay	-	-	-	91	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000235960	ENSMUSP00000158418	TRANSLATION	protein_coding	-	-	-	508	3	4.33	2.4	28.3	0	-4,-5	-	-	15.102	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000235851	ENSMUSP00000157504	TRANSLATION	protein_coding	stop	-	-	60	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000237780	ENSMUSP00000158372	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000236276	ENSMUSP00000158025	TRANSLATION	protein_coding	stop	-	-	121	4	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000235581	ENSMUSP00000158297	TRANSLATION	protein_coding	stop	-	-	385	4	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000235769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037236	Matr3	ENSMUST00000237365	ENSMUSP00000158036	TRANSLATION	protein_coding	-	-	-	558	5	4.33	3.6	28.3	0	-4,-1	-	-	17.266	MINOR
ENSMUSG00000037236	Matr3	ENSMUST00000236860	ENSMUSP00000157570	TRANSLATION	protein_coding	stop	-	-	155	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024331	Dsc2	ENSMUST00000039247	ENSMUSP00000042905	TRANSLATION	protein_coding	-	CCDS29077.1	1	848	44	11.63	1.5	296.3	2	1,-2	-	-	16.188	MINOR
ENSMUSG00000024331	Dsc2	ENSMUST00000075214	ENSMUSP00000074702	TRANSLATION	protein_coding	-	CCDS84361.1	5	902	44	11.63	1.5	326.5	2	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024331	Dsc2	ENSMUST00000128464	ENSMUSP00000123010	TRANSLATION	nonsense_mediated_decay	-	-	1	131	0	0.63	0	61.3	0	1,-2	-	-	-1	MINOR
ENSMUSG00000024331	Dsc2	ENSMUST00000155407	ENSMUSP00000116063	TRANSLATION	protein_coding	start	-	1	240	1	2	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000012282	Wnt8a	ENSMUST00000012426	ENSMUSP00000012426	TRANSLATION	protein_coding	-	CCDS29129.1	1	354	0	4.33	0.5	306.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000092124	B930094E09Rik	ENSMUST00000164667	ENSMUSP00000128772	TRANSLATION	protein_coding	start	-	-	136	0	0	0	0	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000071856	Mcc	ENSMUST00000202845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071856	Mcc	ENSMUST00000202090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071856	Mcc	ENSMUST00000201270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071856	Mcc	ENSMUST00000089874	ENSMUSP00000087318	TRANSLATION	protein_coding	-	CCDS50277.1	1	1003	9	0.94	0.5	197.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071856	Mcc	ENSMUST00000164666	ENSMUSP00000128032	TRANSLATION	protein_coding	-	CCDS50276.1	1	828	0	0	7.8	160.6	0	-4,-5	-	-	6.804	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000235204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000238122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000237492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000235743	ENSMUSP00000157929	TRANSLATION	protein_coding	-	-	-	872	15	19.514	1.2	576.9	0	-4,-5	-	-	12.48	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236764	ENSMUSP00000158323	TRANSLATION	protein_coding	stop	-	-	37	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000225057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000237644	ENSMUSP00000158050	TRANSLATION	protein_coding	start	-	-	527	6	13	0	391.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236898	ENSMUSP00000158272	TRANSLATION	protein_coding	-	-	-	1004	15	20.534	0	625.2	0	-4,-5	-	-	17.322	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000238376	ENSMUSP00000158688	TRANSLATION	protein_coding	stop	-	-	383	1	0.5	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236916	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000224385	ENSMUSP00000153594	TRANSLATION	protein_coding	stop	-	-	113	0	3.014	0	47.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000224347	ENSMUSP00000153052	TRANSLATION	protein_coding	-	CCDS29305.1	-	855	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000224516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000163516	ENSMUSP00000132838	TRANSLATION	protein_coding	-	-	5	835	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000225261	ENSMUSP00000153107	TRANSLATION	protein_coding	stop	-	-	224	9	6.014	0	140.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000237854	ENSMUSP00000157910	TRANSLATION	protein_coding	-	-	-	835	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000080418	ENSMUSP00000079280	TRANSLATION	protein_coding	-	CCDS29305.1	1	855	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000223959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000237384	ENSMUSP00000158238	TRANSLATION	protein_coding	-	CCDS29305.1	-	855	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236736	ENSMUSP00000157490	TRANSLATION	protein_coding	-	-	-	956	15	20.874	7.3	625.2	0	-4,-5	-	-	21	ALTERNATIVE:1
ENSMUSG00000024589	Nedd4l	ENSMUST00000235310	ENSMUSP00000158140	TRANSLATION	protein_coding	stop	-	-	94	0	2.448	0	31.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000236209	ENSMUSP00000157586	TRANSLATION	protein_coding	-	-	-	912	15	19.874	1.2	576.9	0	-4,-5	-	-	13.2	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000235343	ENSMUSP00000158026	TRANSLATION	protein_coding	-	CCDS50309.1	-	976	15	20.874	7.3	625.2	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000024589	Nedd4l	ENSMUST00000236929	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000236103	ENSMUSP00000157658	TRANSLATION	protein_coding	-	-	-	751	6	16.014	1.2	484.1	0	-4,-7	-	-	0.096	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000235571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000224890	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000236100	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024589	Nedd4l	ENSMUST00000237410	ENSMUSP00000158044	TRANSLATION	protein_coding	-	-	-	984	15	20.534	0	625.2	0	-4,-5	-	-	17.322	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000226058	ENSMUSP00000153526	TRANSLATION	protein_coding	-	CCDS29305.1	-	855	6	17.374	6.5	532.4	0	-4,-7	-	-	3.051	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000235339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000235577	ENSMUSP00000158043	TRANSLATION	protein_coding	start/stop	-	-	256	0	3.316	0	92.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024589	Nedd4l	ENSMUST00000237818	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024589	Nedd4l	ENSMUST00000224663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069385	Gm10267	ENSMUST00000091916	ENSMUSP00000089535	TRANSLATION	protein_coding	-	-	5	85	0	1.5	0.5	50.8	0	-1,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000069385	Gm10267	ENSMUST00000181652	ENSMUSP00000137781	TRANSLATION	protein_coding	-	CCDS70890.1	5	85	0	1.5	0.5	50.8	0	-1,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071858	Gm94	ENSMUST00000096570	ENSMUSP00000094321	TRANSLATION	protein_coding	-	CCDS37804.1	1	93	0	0	1.5	157.1	0	4,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000071858	Gm94	ENSMUST00000237926	ENSMUSP00000158092	TRANSLATION	protein_coding	-	-	-	92	0	0	1.5	150.4	0	4,-1	-	-	5.598	ALTERNATIVE:2
ENSMUSG00000102918	Pcdhgc3	ENSMUST00000192103	ENSMUSP00000141611	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	1	0	46.4	0	2,-2	-	-	-1	MINOR
ENSMUSG00000102918	Pcdhgc3	ENSMUST00000194447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102918	Pcdhgc3	ENSMUST00000076807	ENSMUSP00000076085	TRANSLATION	protein_coding	-	CCDS29192.1	1	934	54	1.8	1.5	483.6	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000042680	Garem1	ENSMUST00000049260	ENSMUSP00000048914	TRANSLATION	protein_coding	-	CCDS29091.1	1	876	0	0.6	0.5	268.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042680	Garem1	ENSMUST00000234115	ENSMUSP00000157254	TRANSLATION	protein_coding	-	-	-	578	0	0	0	268.9	0	-4,-6	-	-	6	MINOR
ENSMUSG00000034653	Ythdc2	ENSMUST00000201099	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034653	Ythdc2	ENSMUST00000201507	ENSMUSP00000144479	TRANSLATION	nonsense_mediated_decay	start	-	1	585	0	6.39	0	161.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034653	Ythdc2	ENSMUST00000202176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034653	Ythdc2	ENSMUST00000037763	ENSMUSP00000048340	TRANSLATION	protein_coding	-	CCDS50278.1	1	1445	10	15.69	1.8	396.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024645	Timm21	ENSMUST00000235548	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024645	Timm21	ENSMUST00000235629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024645	Timm21	ENSMUST00000235745	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024645	Timm21	ENSMUST00000235640	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024645	Timm21	ENSMUST00000025547	ENSMUSP00000025547	TRANSLATION	protein_coding	-	CCDS29386.1	1	244	0	0	3.9	161.1	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000024645	Timm21	ENSMUST00000237949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024645	Timm21	ENSMUST00000236812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024645	Timm21	ENSMUST00000235591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024532	1700034E13Rik	ENSMUST00000118724	ENSMUSP00000112845	TRANSLATION	protein_coding	-	CCDS29249.1	1	108	3	0	2.7	74.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000024532	1700034E13Rik	ENSMUST00000091904	ENSMUSP00000089518	TRANSLATION	protein_coding	-	CCDS29249.1	1	108	3	0	2.7	74.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000024236	Svil	ENSMUST00000131609	ENSMUSP00000122242	TRANSLATION	nonsense_mediated_decay	-	-	5	2031	3	4.96	0	30.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024236	Svil	ENSMUST00000148564	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024236	Svil	ENSMUST00000129543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024236	Svil	ENSMUST00000125512	ENSMUSP00000121972	TRANSLATION	nonsense_mediated_decay	start	-	5	749	3	2.42	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024236	Svil	ENSMUST00000138258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024236	Svil	ENSMUST00000126977	ENSMUSP00000115078	TRANSLATION	protein_coding	-	CCDS37720.1	5	2170	3	8.14	0.5	87.6	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000024236	Svil	ENSMUST00000146723	ENSMUSP00000115591	TRANSLATION	protein_coding	start/stop	-	3	169	0	1.88	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024236	Svil	ENSMUST00000025079	ENSMUSP00000025079	TRANSLATION	protein_coding	-	CCDS37720.1	1	2170	3	8.14	0.5	87.6	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000024236	Svil	ENSMUST00000210707	ENSMUSP00000147843	TRANSLATION	protein_coding	-	-	5	2257	3	8.14	0	87.6	0	-4,-2	-	-	15	ALTERNATIVE:2
ENSMUSG00000024236	Svil	ENSMUST00000143254	ENSMUSP00000119287	TRANSLATION	protein_coding	-	CCDS84352.1	5	1766	3	8.14	1.5	87.6	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000024236	Svil	ENSMUST00000139761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024236	Svil	ENSMUST00000153016	ENSMUSP00000121497	TRANSLATION	protein_coding	stop	-	2	40	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024236	Svil	ENSMUST00000127297	ENSMUSP00000115223	TRANSLATION	protein_coding	-	-	5	2056	3	8.14	0	87.6	0	-4,-6	-	-	15	ALTERNATIVE:2
ENSMUSG00000024236	Svil	ENSMUST00000140448	ENSMUSP00000119803	TRANSLATION	protein_coding	-	CCDS37720.1	5	2170	3	8.14	0.5	87.6	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000024236	Svil	ENSMUST00000131210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024511	Rab27b	ENSMUST00000121693	ENSMUSP00000114094	TRANSLATION	protein_coding	-	CCDS29331.1	1	218	19	4.75	13	184.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024511	Rab27b	ENSMUST00000127217	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024511	Rab27b	ENSMUST00000117692	ENSMUSP00000112807	TRANSLATION	protein_coding	-	CCDS29331.1	1	218	19	4.75	13	184.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024511	Rab27b	ENSMUST00000069749	ENSMUSP00000068349	TRANSLATION	protein_coding	-	CCDS29331.1	1	218	19	4.75	13	184.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000056632	Dsg3	ENSMUST00000070892	ENSMUSP00000064718	TRANSLATION	protein_coding	-	CCDS29083.1	1	993	32	9.8	0.5	196.8	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000056632	Dsg3	ENSMUST00000234945	ENSMUSP00000157289	TRANSLATION	protein_coding	-	-	-	929	32	9.8	0	196.8	0	2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000073591	Pcdhb22	ENSMUST00000192409	ENSMUSP00000141521	TRANSLATION	protein_coding	-	CCDS29187.1	-	794	56	1.8	1.5	470.6	1	1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000073591	Pcdhb22	ENSMUST00000097609	ENSMUSP00000095214	TRANSLATION	protein_coding	-	-	2	537	36	0.8	0	298.8	1	-4,-5	-	-	2.664	MINOR
ENSMUSG00000102748	Pcdhgb2	ENSMUST00000195112	ENSMUSP00000141449	TRANSLATION	protein_coding	-	CCDS79626.1	1	928	52	1	0.5	512.8	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000102748	Pcdhgb2	ENSMUST00000193631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024646	Cyb5a	ENSMUST00000025549	ENSMUSP00000025549	TRANSLATION	nonsense_mediated_decay	-	-	3	98	20	2.33	4.1	83.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024646	Cyb5a	ENSMUST00000235725	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024646	Cyb5a	ENSMUST00000163083	ENSMUSP00000124412	TRANSLATION	protein_coding	-	-	3	110	20	2.74	0	37.4	1	-4,-1	-	-	13.02	MINOR
ENSMUSG00000024646	Cyb5a	ENSMUST00000159846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024646	Cyb5a	ENSMUST00000159837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024646	Cyb5a	ENSMUST00000236742	ENSMUSP00000157603	TRANSLATION	nonsense_mediated_decay	-	-	-	54	4	1.132	0	35	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024646	Cyb5a	ENSMUST00000235254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024646	Cyb5a	ENSMUST00000160180	ENSMUSP00000124480	TRANSLATION	protein_coding	-	CCDS29385.1	1	134	20	3.58	11	83.1	1	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024575	Pde6a	ENSMUST00000025468	ENSMUSP00000025468	TRANSLATION	protein_coding	-	CCDS29283.1	1	860	4	12.445	6.3	354.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024575	Pde6a	ENSMUST00000135688	ENSMUSP00000115963	TRANSLATION	protein_coding	start	-	1	182	1	2.85	0	99.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000055561	Spink5	ENSMUST00000069245	ENSMUSP00000066214	TRANSLATION	protein_coding	-	CCDS37805.1	1	1017	0	6.37	0.5	291.8	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000034295	Fhod3	ENSMUST00000234462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034295	Fhod3	ENSMUST00000037097	ENSMUSP00000041361	TRANSLATION	protein_coding	-	CCDS29104.1	1	1578	0	11.8	0.5	319.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000034295	Fhod3	ENSMUST00000234199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034295	Fhod3	ENSMUST00000234526	ENSMUSP00000157193	TRANSLATION	protein_coding	-	-	-	1546	0	11.8	0.5	319.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000034295	Fhod3	ENSMUST00000234834	ENSMUSP00000157226	TRANSLATION	protein_coding	-	-	-	1427	0	11.8	0.5	319.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024526	Cidea	ENSMUST00000025404	ENSMUSP00000025404	TRANSLATION	protein_coding	-	CCDS37846.1	1	217	0	2.2	1.5	103.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024290	Rock1	ENSMUST00000235067	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024290	Rock1	ENSMUST00000235075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024290	Rock1	ENSMUST00000234734	ENSMUSP00000157140	TRANSLATION	protein_coding	stop	-	-	504	19	10.18	0	216.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024290	Rock1	ENSMUST00000234050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024290	Rock1	ENSMUST00000234610	ENSMUSP00000157135	TRANSLATION	nonsense_mediated_decay	-	-	-	1089	19	11.9	0	298.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024290	Rock1	ENSMUST00000067947	ENSMUSP00000069549	TRANSLATION	protein_coding	-	CCDS29053.2	5	1354	19	13.98	7.5	298.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024290	Rock1	ENSMUST00000234926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024290	Rock1	ENSMUST00000234463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024376	Epb41l4a	ENSMUST00000025234	ENSMUSP00000025234	TRANSLATION	protein_coding	-	CCDS29124.1	1	686	0	7.3	5.1	254.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000024376	Epb41l4a	ENSMUST00000235242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024376	Epb41l4a	ENSMUST00000236716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024376	Epb41l4a	ENSMUST00000236514	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024376	Epb41l4a	ENSMUST00000235876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024376	Epb41l4a	ENSMUST00000235393	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024376	Epb41l4a	ENSMUST00000237971	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035394	Cfap53	ENSMUST00000177407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035394	Cfap53	ENSMUST00000177101	ENSMUSP00000135452	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035394	Cfap53	ENSMUST00000114895	ENSMUSP00000110545	TRANSLATION	protein_coding	-	CCDS37857.2	1	514	0	0	1.7	66.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000035394	Cfap53	ENSMUST00000176766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035394	Cfap53	ENSMUST00000176435	ENSMUSP00000134908	TRANSLATION	nonsense_mediated_decay	-	-	1	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024427	Spry4	ENSMUST00000025295	ENSMUSP00000025295	TRANSLATION	protein_coding	-	CCDS29202.1	1	300	3	0	7.5	114.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053624	Gykl1	ENSMUST00000066193	ENSMUSP00000067598	TRANSLATION	protein_coding	-	CCDS29250.1	-	549	11	1	8.8	503.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000104148	Pcdha2	ENSMUST00000115662	ENSMUSP00000111326	TRANSLATION	protein_coding	-	CCDS37775.1	1	948	50	1	1.5	558.7	1	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000104148	Pcdha2	ENSMUST00000195590	ENSMUSP00000141355	TRANSLATION	protein_coding	-	-	1	902	50	1	0	471	1	1,-2	-	-	12.738	MINOR
ENSMUSG00000109238	Gm35060	ENSMUST00000207671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000109238	Gm35060	ENSMUST00000207669	ENSMUSP00000146976	TRANSLATION	protein_coding	-	-	5	231	0	0	0.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000061928	Dsg1b	ENSMUST00000076737	ENSMUSP00000076026	TRANSLATION	protein_coding	-	CCDS29081.1	1	1060	30	8.125	0.5	187.5	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000103442	Pcdha1	ENSMUST00000193839	ENSMUSP00000142308	TRANSLATION	protein_coding	-	-	1	902	53	1	0	462.9	1	3,-4	-	-	12.738	MINOR
ENSMUSG00000103442	Pcdha1	ENSMUST00000070797	ENSMUSP00000068828	TRANSLATION	protein_coding	-	CCDS37774.1	1	948	53	1	1.5	550.6	1	3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000024565	Sall3	ENSMUST00000057950	ENSMUSP00000056967	TRANSLATION	protein_coding	-	CCDS29371.1	1	1248	28	0.6	1.5	118.8	0	-4,-5	-	-	9.486	MINOR
ENSMUSG00000024565	Sall3	ENSMUST00000238808	ENSMUSP00000158909	TRANSLATION	protein_coding	-	-	-	1320	36	0.96	1.5	134.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024565	Sall3	ENSMUST00000235746	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046886	Zfp474	ENSMUST00000209270	ENSMUSP00000147873	TRANSLATION	protein_coding	-	CCDS29248.1	1	347	6	0	0.5	149.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046886	Zfp474	ENSMUST00000211585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046886	Zfp474	ENSMUST00000072666	ENSMUSP00000072453	TRANSLATION	protein_coding	-	CCDS29248.1	1	347	6	0	0.5	149.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024270	Slc39a6	ENSMUST00000070726	ENSMUSP00000064667	TRANSLATION	protein_coding	-	CCDS50239.1	1	765	0	0	0.5	341	7	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000024270	Slc39a6	ENSMUST00000128106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024270	Slc39a6	ENSMUST00000154205	ENSMUSP00000122151	TRANSLATION	protein_coding	stop	-	5	434	0	0	2.4	302.2	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000024270	Slc39a6	ENSMUST00000152504	ENSMUSP00000120247	TRANSLATION	protein_coding	stop	-	3	48	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025423	Pias2	ENSMUST00000168882	ENSMUSP00000131485	TRANSLATION	protein_coding	-	CCDS50324.1	1	614	4	8.6	6.5	198.9	0	-4,-2	-	-	17.34	ALTERNATIVE:1
ENSMUSG00000025423	Pias2	ENSMUST00000235135	ENSMUSP00000157458	TRANSLATION	nonsense_mediated_decay	-	-	-	252	0	3.18	0	69.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025423	Pias2	ENSMUST00000114776	ENSMUSP00000110424	TRANSLATION	protein_coding	-	CCDS50323.1	1	565	4	8.6	4.1	198.9	0	-4,-2	-	-	16.468	ALTERNATIVE:2
ENSMUSG00000025423	Pias2	ENSMUST00000114777	ENSMUSP00000110425	TRANSLATION	protein_coding	-	CCDS37866.1	1	621	4	8.93	5.3	198.9	0	-4,-5	-	-	17.564	PRINCIPAL:3
ENSMUSG00000033272	Slc35a4	ENSMUST00000185899	ENSMUSP00000140201	TRANSLATION	protein_coding	-	-	1	103	0	0	14.3	35.8	0	-4,-5	-	-	5.842	MINOR
ENSMUSG00000033272	Slc35a4	ENSMUST00000186538	ENSMUSP00000140615	TRANSLATION	protein_coding	-	CCDS29158.1	1	324	0	0	7.5	105.1	9	-2,-3	-	-	7.956	PRINCIPAL:1
ENSMUSG00000033272	Slc35a4	ENSMUST00000170288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033272	Slc35a4	ENSMUST00000050476	ENSMUSP00000129718	TRANSLATION	protein_coding	-	CCDS29158.1	1	324	0	0	7.5	105.1	9	-2,-3	-	-	7.956	PRINCIPAL:1
ENSMUSG00000033272	Slc35a4	ENSMUST00000036158	ENSMUSP00000036081	TRANSLATION	protein_coding	-	CCDS29158.1	1	324	0	0	7.5	105.1	9	-2,-3	-	-	7.956	PRINCIPAL:1
ENSMUSG00000033272	Slc35a4	ENSMUST00000168343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000103677	Pcdhga4	ENSMUST00000195163	ENSMUSP00000141272	TRANSLATION	protein_coding	start/stop	-	3	266	10	1.4	0	102	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000103677	Pcdhga4	ENSMUST00000194418	ENSMUSP00000142140	TRANSLATION	protein_coding	-	CCDS79625.1	1	930	51	2	0.5	549.4	1	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000024593	Megf10	ENSMUST00000139892	ENSMUSP00000116814	TRANSLATION	protein_coding	stop	-	1	1061	28	6.6	0	226.2	1	3,-2	-	-	-1	MINOR
ENSMUSG00000024593	Megf10	ENSMUST00000075770	ENSMUSP00000075174	TRANSLATION	protein_coding	-	CCDS29264.1	1	1147	28	6.6	0.5	226.2	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000103749	Pcdhgb5	ENSMUST00000193006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103749	Pcdhgb5	ENSMUST00000192535	ENSMUSP00000142010	TRANSLATION	protein_coding	-	CCDS79631.1	1	926	52	1	0.5	519.6	0	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000062210	Tnfaip8	ENSMUST00000153545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062210	Tnfaip8	ENSMUST00000148159	ENSMUSP00000119041	TRANSLATION	protein_coding	-	CCDS37817.2	1	212	0	4.25	2.7	261.4	0	-4,-5	-	-	12.46	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000087655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062210	Tnfaip8	ENSMUST00000145726	ENSMUSP00000136665	TRANSLATION	protein_coding	-	-	3	100	0	2.25	0	135.4	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000134348	ENSMUSP00000119533	TRANSLATION	protein_coding	stop	-	3	77	0	1	0	62	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000180305	ENSMUSP00000136682	TRANSLATION	protein_coding	-	-	5	122	0	0	0	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000148989	ENSMUSP00000120712	TRANSLATION	protein_coding	-	CCDS50288.1	2	188	0	4.25	15.8	261.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000062210	Tnfaip8	ENSMUST00000179937	ENSMUSP00000136030	TRANSLATION	protein_coding	-	CCDS50287.1	1	136	0	2.5	0.5	141.9	0	-4,-6	-	-	2.502	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000155403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062210	Tnfaip8	ENSMUST00000128377	ENSMUSP00000136152	TRANSLATION	protein_coding	stop	-	2	166	0	3.5	0	231.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000126666	ENSMUSP00000121372	TRANSLATION	protein_coding	-	-	2	212	0	4.25	0	261.4	0	-4,-7	-	-	12	MINOR
ENSMUSG00000062210	Tnfaip8	ENSMUST00000124175	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062210	Tnfaip8	ENSMUST00000153873	ENSMUSP00000115396	TRANSLATION	protein_coding	stop	-	5	114	0	2	0	115.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000236116	ENSMUSP00000157833	TRANSLATION	protein_coding	-	CCDS29200.1	-	485	23	1.98	0.5	163.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060450	Rnf14	ENSMUST00000237089	ENSMUSP00000157732	TRANSLATION	protein_coding	stop	-	-	87	0	0	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000236649	ENSMUSP00000157501	TRANSLATION	nonsense_mediated_decay	-	-	-	79	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000236690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060450	Rnf14	ENSMUST00000238031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060450	Rnf14	ENSMUST00000237667	ENSMUSP00000158572	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000237903	ENSMUSP00000158563	TRANSLATION	protein_coding	stop	-	-	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000237416	ENSMUSP00000157933	TRANSLATION	protein_coding	-	-	-	23	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000237824	ENSMUSP00000158137	TRANSLATION	protein_coding	stop	-	-	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000072376	ENSMUSP00000072212	TRANSLATION	protein_coding	-	CCDS29200.1	1	485	23	1.98	0.5	163.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060450	Rnf14	ENSMUST00000236353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060450	Rnf14	ENSMUST00000235812	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060450	Rnf14	ENSMUST00000235811	ENSMUSP00000158209	TRANSLATION	protein_coding	stop	-	-	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000236982	ENSMUSP00000157587	TRANSLATION	protein_coding	stop	-	-	94	0	0	0	43.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000237211	ENSMUSP00000157387	TRANSLATION	protein_coding	stop	-	-	183	0	0	0	87.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000235549	ENSMUSP00000158487	TRANSLATION	protein_coding	stop	-	-	142	2	0	0	23.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000170811	ENSMUSP00000133070	TRANSLATION	protein_coding	-	CCDS50261.1	1	359	23	1.98	0.5	76.1	0	-4,-5	-	-	12.774	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000171461	ENSMUSP00000126205	TRANSLATION	protein_coding	-	CCDS29200.1	1	485	23	1.98	0.5	163.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000060450	Rnf14	ENSMUST00000235491	ENSMUSP00000158444	TRANSLATION	protein_coding	stop	-	-	102	0	0	0	49.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060450	Rnf14	ENSMUST00000236032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060450	Rnf14	ENSMUST00000236319	ENSMUSP00000157812	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039529	Atp8b1	ENSMUST00000235459	ENSMUSP00000158349	TRANSLATION	protein_coding	start/stop	-	-	245	4	0.42	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039529	Atp8b1	ENSMUST00000237686	ENSMUSP00000157875	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039529	Atp8b1	ENSMUST00000025482	ENSMUSP00000025482	TRANSLATION	protein_coding	-	CCDS29304.1	1	1251	8	1.45	7.6	460.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024381	Bin1	ENSMUST00000025239	ENSMUSP00000025239	TRANSLATION	protein_coding	-	CCDS29119.1	2	588	0	12.455	2.7	180.2	0	-4,-5	-	-	10.914	MINOR
ENSMUSG00000024381	Bin1	ENSMUST00000234857	ENSMUSP00000157259	TRANSLATION	protein_coding	-	-	-	434	0	11.955	2.7	195.1	0	-4,-5	-	-	10.812	MINOR
ENSMUSG00000024381	Bin1	ENSMUST00000234373	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024381	Bin1	ENSMUST00000234024	ENSMUSP00000156981	TRANSLATION	protein_coding	stop	-	-	120	0	3.75	0	77.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024381	Bin1	ENSMUST00000091967	ENSMUSP00000089590	TRANSLATION	protein_coding	-	CCDS37755.1	1	477	0	12.955	2.7	195.1	0	-4,-5	-	-	12.81	PRINCIPAL:1
ENSMUSG00000024381	Bin1	ENSMUST00000234496	ENSMUSP00000156976	TRANSLATION	protein_coding	-	-	-	410	0	11.58	5.2	195.1	0	-4,-5	-	-	11.252	MINOR
ENSMUSG00000024384	Iws1	ENSMUST00000212115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024384	Iws1	ENSMUST00000213074	ENSMUSP00000148489	TRANSLATION	nonsense_mediated_decay	start	-	5	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024384	Iws1	ENSMUST00000212280	ENSMUSP00000148588	TRANSLATION	nonsense_mediated_decay	start	-	3	155	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024384	Iws1	ENSMUST00000212675	ENSMUSP00000148514	TRANSLATION	protein_coding	-	-	5	765	0	3.05	0.5	56.2	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024384	Iws1	ENSMUST00000212458	ENSMUSP00000148707	TRANSLATION	protein_coding	start	-	3	198	0	2.6	0	56.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024384	Iws1	ENSMUST00000025243	ENSMUSP00000025243	TRANSLATION	protein_coding	-	CCDS29115.1	1	766	0	3.05	1.5	56.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024384	Iws1	ENSMUST00000212104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024346	Pfdn1	ENSMUST00000237792	ENSMUSP00000158562	TRANSLATION	protein_coding	-	-	-	87	0	0	0	32.5	0	-4,-5	-	-	2.616	MINOR
ENSMUSG00000024346	Pfdn1	ENSMUST00000237499	ENSMUSP00000158027	TRANSLATION	protein_coding	start	-	-	104	0	0	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024346	Pfdn1	ENSMUST00000025204	ENSMUSP00000025204	TRANSLATION	protein_coding	-	CCDS29152.1	1	122	0	0	21.5	74.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000102543	Pcdhgc5	ENSMUST00000055935	ENSMUSP00000060949	TRANSLATION	protein_coding	-	CCDS29194.1	1	944	45	0.8	0.5	496.9	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000102543	Pcdhgc5	ENSMUST00000192875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102543	Pcdhgc5	ENSMUST00000193890	ENSMUSP00000142214	TRANSLATION	protein_coding	stop	-	3	107	0	0	0	94.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000102543	Pcdhgc5	ENSMUST00000193941	ENSMUSP00000141256	TRANSLATION	protein_coding	-	-	1	55	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024317	Rnf138	ENSMUST00000072847	ENSMUSP00000072626	TRANSLATION	protein_coding	-	CCDS29089.1	1	209	17	2.02	1.5	54.1	0	-4,-5	-	-	13.36	MINOR
ENSMUSG00000024317	Rnf138	ENSMUST00000052396	ENSMUSP00000056641	TRANSLATION	protein_coding	-	CCDS29089.1	5	209	17	2.02	1.5	54.1	0	-4,-5	-	-	13.36	MINOR
ENSMUSG00000024317	Rnf138	ENSMUST00000234169	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024317	Rnf138	ENSMUST00000234107	ENSMUSP00000157102	TRANSLATION	protein_coding	-	CCDS29090.1	-	245	17	2.82	6.6	106	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024317	Rnf138	ENSMUST00000234545	ENSMUSP00000157123	TRANSLATION	protein_coding	start	-	-	179	17	2.07	0	54.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024317	Rnf138	ENSMUST00000234536	ENSMUSP00000157047	TRANSLATION	protein_coding	-	CCDS29090.1	-	245	17	2.82	6.6	106	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000052713	Zfp608	ENSMUST00000064763	ENSMUSP00000068192	TRANSLATION	protein_coding	-	CCDS37824.1	1	1511	4	0	2.9	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000052713	Zfp608	ENSMUST00000238150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052713	Zfp608	ENSMUST00000237009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052713	Zfp608	ENSMUST00000237844	ENSMUSP00000157650	TRANSLATION	nonsense_mediated_decay	-	-	-	303	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000118497	AC124764.1	ENSMUST00000239144	ENSMUSP00000158939	TRANSLATION	protein_coding	-	-	-	293	0	0	0	57.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024647	Cbln2	ENSMUST00000068423	ENSMUSP00000068863	TRANSLATION	protein_coding	-	CCDS29388.1	1	224	0	2.8	7.5	95.4	0	-1,1	-	-	15	PRINCIPAL:1
ENSMUSG00000024647	Cbln2	ENSMUST00000122079	ENSMUSP00000113695	TRANSLATION	protein_coding	-	CCDS29388.1	1	224	0	2.8	7.5	95.4	0	-1,1	-	-	15	PRINCIPAL:1
ENSMUSG00000024647	Cbln2	ENSMUST00000169470	ENSMUSP00000126810	TRANSLATION	protein_coding	-	CCDS29388.1	1	224	0	2.8	7.5	95.4	0	-1,1	-	-	15	PRINCIPAL:1
ENSMUSG00000024647	Cbln2	ENSMUST00000122464	ENSMUSP00000113996	TRANSLATION	protein_coding	-	CCDS29388.1	1	224	0	2.8	7.5	95.4	0	-1,1	-	-	15	PRINCIPAL:1
ENSMUSG00000057130	Txnl4a	ENSMUST00000126360	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057130	Txnl4a	ENSMUST00000130675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057130	Txnl4a	ENSMUST00000145963	ENSMUSP00000115320	TRANSLATION	protein_coding	-	CCDS29365.1	1	142	0	3.33	17.5	232.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000057130	Txnl4a	ENSMUST00000025464	ENSMUSP00000025464	TRANSLATION	protein_coding	stop	-	2	93	0	2.33	0	155.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048875	Pudp	ENSMUST00000056460	ENSMUSP00000057378	TRANSLATION	protein_coding	-	CCDS29244.1	-	234	9	1	3.9	45.3	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000048875	Pudp	ENSMUST00000235550	ENSMUSP00000158276	TRANSLATION	nonsense_mediated_decay	-	-	-	234	9	1	3.9	45.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024268	Celf4	ENSMUST00000223704	ENSMUSP00000153326	TRANSLATION	protein_coding	-	-	-	485	0	7.43	5.3	142.3	0	-4,-6	-	-	10.38	MINOR
ENSMUSG00000024268	Celf4	ENSMUST00000224553	ENSMUSP00000153258	TRANSLATION	protein_coding	-	-	-	456	0	6.68	5.3	139.6	0	-4,-6	-	-	8.718	MINOR
ENSMUSG00000024268	Celf4	ENSMUST00000226091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024268	Celf4	ENSMUST00000115816	ENSMUSP00000111483	TRANSLATION	protein_coding	-	CCDS50241.1	1	504	0	8.18	4.1	174.6	0	-4,-6	-	-	13.311	PRINCIPAL:2
ENSMUSG00000024268	Celf4	ENSMUST00000225927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024268	Celf4	ENSMUST00000224028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024268	Celf4	ENSMUST00000025117	ENSMUSP00000025117	TRANSLATION	protein_coding	-	-	1	495	0	7.85	8.1	174.6	0	-4,-6	-	-	14.34	ALTERNATIVE:1
ENSMUSG00000024268	Celf4	ENSMUST00000225528	ENSMUSP00000153706	TRANSLATION	nonsense_mediated_decay	start	-	-	19	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024268	Celf4	ENSMUST00000224143	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024268	Celf4	ENSMUST00000225477	ENSMUSP00000153226	TRANSLATION	protein_coding	-	CCDS29106.1	-	484	0	7.43	5.3	142.3	0	-4,-6	-	-	10.38	MINOR
ENSMUSG00000047992	Dipk1c	ENSMUST00000237920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047992	Dipk1c	ENSMUST00000161033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047992	Dipk1c	ENSMUST00000235504	ENSMUSP00000158524	TRANSLATION	protein_coding	-	CCDS29384.1	-	264	0	0	0.5	198.5	0	-4,-5	-	-	1.002	MINOR
ENSMUSG00000047992	Dipk1c	ENSMUST00000237435	ENSMUSP00000157965	TRANSLATION	nonsense_mediated_decay	start	-	-	40	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000047992	Dipk1c	ENSMUST00000159800	ENSMUSP00000157585	TRANSLATION	nonsense_mediated_decay	start	-	5	30	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000047992	Dipk1c	ENSMUST00000161429	ENSMUSP00000124603	TRANSLATION	protein_coding	-	-	2	410	0	0	1.5	281.8	0	-2,0	-	-	6	PRINCIPAL:1
ENSMUSG00000047992	Dipk1c	ENSMUST00000052501	ENSMUSP00000057697	TRANSLATION	protein_coding	-	CCDS29384.1	1	264	0	0	0.5	198.5	0	-4,-5	-	-	1.002	MINOR
ENSMUSG00000078240	Gm3550	ENSMUST00000105038	ENSMUSP00000100655	TRANSLATION	protein_coding	-	-	-	160	0	0	0.5	94.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024379	Tslp	ENSMUST00000234876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024379	Tslp	ENSMUST00000025237	ENSMUSP00000025237	TRANSLATION	protein_coding	-	CCDS29121.1	1	140	0	3.5	1.5	155.1	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024481	Lvrn	ENSMUST00000234519	ENSMUSP00000157186	TRANSLATION	protein_coding	-	-	-	559	14	7.16	0	229.8	0	1,-3	-	-	6	MINOR
ENSMUSG00000024481	Lvrn	ENSMUST00000025358	ENSMUSP00000025358	TRANSLATION	protein_coding	-	CCDS50284.1	5	991	14	14.445	0.5	447.4	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000103897	Pcdhga8	ENSMUST00000066149	ENSMUSP00000067728	TRANSLATION	protein_coding	-	CCDS37782.1	1	932	52	1	0.5	525.2	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024302	Dtna	ENSMUST00000115832	ENSMUSP00000111498	TRANSLATION	protein_coding	-	CCDS50236.1	1	682	0	4.28	5.3	262.5	0	-4,-6	-	-	13.986	ALTERNATIVE:1
ENSMUSG00000024302	Dtna	ENSMUST00000222515	ENSMUSP00000152751	TRANSLATION	protein_coding	stop	-	2	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024302	Dtna	ENSMUST00000221471	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024302	Dtna	ENSMUST00000222726	ENSMUSP00000152725	TRANSLATION	protein_coding	start	-	5	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024302	Dtna	ENSMUST00000220967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024302	Dtna	ENSMUST00000221880	ENSMUSP00000152565	TRANSLATION	protein_coding	-	-	2	567	0	4.28	5.3	262.5	0	-4,-6	-	-	13.986	ALTERNATIVE:1
ENSMUSG00000024302	Dtna	ENSMUST00000222351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024302	Dtna	ENSMUST00000223441	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024302	Dtna	ENSMUST00000047954	ENSMUSP00000037475	TRANSLATION	protein_coding	-	CCDS29094.1	1	371	0	4.28	7.5	262.5	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000024302	Dtna	ENSMUST00000220904	ENSMUSP00000152288	TRANSLATION	protein_coding	-	-	1	746	0	4.28	2.9	262.5	0	-4,-6	-	-	12.876	MINOR
ENSMUSG00000033016	Nfatc1	ENSMUST00000237776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033016	Nfatc1	ENSMUST00000078049	ENSMUSP00000077196	TRANSLATION	protein_coding	-	CCDS37873.1	1	827	0	5.5	3.9	172.4	0	-4,-7	-	-	13	ALTERNATIVE:2
ENSMUSG00000033016	Nfatc1	ENSMUST00000035800	ENSMUSP00000046312	TRANSLATION	protein_coding	-	CCDS29369.1	1	703	0	5.5	0.5	172.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000033016	Nfatc1	ENSMUST00000236711	ENSMUSP00000158358	TRANSLATION	protein_coding	-	-	-	717	0	5.5	1.7	172.4	0	-4,-7	-	-	12.241	ALTERNATIVE:2
ENSMUSG00000033016	Nfatc1	ENSMUST00000170905	ENSMUSP00000129001	TRANSLATION	protein_coding	-	CCDS50336.1	1	939	0	5.5	0.5	172.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000033016	Nfatc1	ENSMUST00000167977	ENSMUSP00000126884	TRANSLATION	protein_coding	-	CCDS50335.1	1	925	0	5.5	0.5	172.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033016	Nfatc1	ENSMUST00000236310	ENSMUSP00000158284	TRANSLATION	protein_coding	-	-	-	813	0	5.5	0.5	172.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000103255	Pcdhac1	ENSMUST00000007584	ENSMUSP00000007584	TRANSLATION	protein_coding	-	CCDS29167.1	1	964	49	0.6	2.9	557.6	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000102206	Pcdha11	ENSMUST00000192447	ENSMUSP00000142270	TRANSLATION	protein_coding	-	-	1	904	51	3.2	0	470.9	2	1,-3	-	-	12.48	MINOR
ENSMUSG00000102206	Pcdha11	ENSMUST00000194050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102206	Pcdha11	ENSMUST00000115657	ENSMUSP00000111321	TRANSLATION	protein_coding	-	CCDS37779.1	1	950	51	3.2	1.5	562.9	2	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000102206	Pcdha11	ENSMUST00000194691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102206	Pcdha11	ENSMUST00000193856	ENSMUSP00000141821	TRANSLATION	protein_coding	start/stop	-	3	209	5	1.6	0	216.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073542	Cep76	ENSMUST00000236857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073542	Cep76	ENSMUST00000097542	ENSMUSP00000095149	TRANSLATION	protein_coding	-	CCDS37850.1	1	659	0	0	8.3	204.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000073542	Cep76	ENSMUST00000237975	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024235	Map3k8	ENSMUST00000173708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024235	Map3k8	ENSMUST00000025078	ENSMUSP00000025078	TRANSLATION	protein_coding	-	CCDS29036.1	1	467	5	6.05	10.8	159.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024235	Map3k8	ENSMUST00000173930	ENSMUSP00000133469	TRANSLATION	nonsense_mediated_decay	-	-	1	181	1	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024235	Map3k8	ENSMUST00000172805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024235	Map3k8	ENSMUST00000105472	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024276	Zfp397	ENSMUST00000223595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024276	Zfp397	ENSMUST00000224107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024276	Zfp397	ENSMUST00000225682	ENSMUSP00000152930	TRANSLATION	protein_coding	stop	-	-	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024276	Zfp397	ENSMUST00000060762	ENSMUSP00000057253	TRANSLATION	protein_coding	-	CCDS29096.1	1	527	36	1.6	1.5	371.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000103125	Gm37388	ENSMUST00000193984	ENSMUSP00000142274	TRANSLATION	protein_coding,RT	start/stop	-	5	143	0	0	0	51.8	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000025429	Pstpip2	ENSMUST00000238172	ENSMUSP00000158158	TRANSLATION	protein_coding	-	-	-	230	0	4.105	0	0	0	-4,-5	-	-	1.314	MINOR
ENSMUSG00000025429	Pstpip2	ENSMUST00000114741	ENSMUSP00000110389	TRANSLATION	protein_coding	-	CCDS37868.1	1	334	0	6.449	7.1	53.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024544	Ldlrad4	ENSMUST00000236987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024544	Ldlrad4	ENSMUST00000063775	ENSMUSP00000068471	TRANSLATION	protein_coding	-	CCDS29325.1	1	306	5	1	5.2	31.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000103793	Pcdhga6	ENSMUST00000195823	ENSMUSP00000141803	TRANSLATION	protein_coding	-	CCDS79628.1	1	932	49	0.8	0.5	534.9	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000062328	Rpl17	ENSMUST00000237431	ENSMUSP00000157556	TRANSLATION	protein_coding	-	CCDS29344.1	-	184	0	4.5	21.5	156.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000062328	Rpl17	ENSMUST00000079716	ENSMUSP00000078654	TRANSLATION	protein_coding	-	CCDS29344.1	1	184	0	4.5	21.5	156.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000039840	Epg5	ENSMUST00000237997	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039840	Epg5	ENSMUST00000044622	ENSMUSP00000038681	TRANSLATION	protein_coding	-	CCDS57126.1	5	2572	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000039840	Epg5	ENSMUST00000235433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000103770	Pcdha9	ENSMUST00000115659	ENSMUSP00000111323	TRANSLATION	protein_coding	-	CCDS37777.1	1	979	49	1	1.5	500	0	-3,1	-	-	18	PRINCIPAL:1
ENSMUSG00000024608	Rps14	ENSMUST00000127568	ENSMUSP00000114478	TRANSLATION	protein_coding	stop	-	3	119	0	3.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024608	Rps14	ENSMUST00000142980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024608	Rps14	ENSMUST00000025511	ENSMUSP00000025511	TRANSLATION	protein_coding	-	CCDS29274.1	1	151	0	4.41	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024608	Rps14	ENSMUST00000235966	ENSMUSP00000158138	TRANSLATION	protein_coding	-	CCDS29274.1	-	151	0	4.41	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024608	Rps14	ENSMUST00000122279	ENSMUSP00000113504	TRANSLATION	protein_coding	-	CCDS29274.1	1	151	0	4.41	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024608	Rps14	ENSMUST00000137400	ENSMUSP00000122985	TRANSLATION	protein_coding	stop	-	5	138	0	3.91	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024608	Rps14	ENSMUST00000118551	ENSMUSP00000113081	TRANSLATION	protein_coding	-	CCDS29274.1	2	151	0	4.41	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024608	Rps14	ENSMUST00000236652	ENSMUSP00000158215	TRANSLATION	protein_coding	stop	-	-	80	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024608	Rps14	ENSMUST00000236441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024608	Rps14	ENSMUST00000235603	ENSMUSP00000157948	TRANSLATION	protein_coding	-	CCDS29274.1	-	151	0	4.41	21.5	0	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000053477	Tcf4	ENSMUST00000136019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000202074	ENSMUSP00000144544	TRANSLATION	protein_coding	stop	-	5	145	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000066717	ENSMUSP00000067318	TRANSLATION	protein_coding	-	-	1	692	0	2.732	0	44.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000145918	ENSMUSP00000144298	TRANSLATION	protein_coding	stop	-	5	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201045	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000209174	ENSMUSP00000147155	TRANSLATION	protein_coding	stop	-	5	163	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201410	ENSMUSP00000143950	TRANSLATION	protein_coding	-	-	5	537	0	1.532	5.3	44.6	0	-4,-6	-	-	11.064	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202751	ENSMUSP00000144064	TRANSLATION	nonsense_mediated_decay	-	-	5	198	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202057	ENSMUSP00000144647	TRANSLATION	protein_coding	-	-	5	537	0	1.532	5.3	44.6	0	-4,-6	-	-	11.064	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000201964	ENSMUSP00000144070	TRANSLATION	protein_coding	stop	-	5	172	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000201589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000114980	ENSMUSP00000110631	TRANSLATION	protein_coding	-	CCDS29329.1	5	670	0	2.732	6.6	44.6	0	-4,-5	-	-	14.211	PRINCIPAL:3
ENSMUSG00000053477	Tcf4	ENSMUST00000202435	ENSMUSP00000144407	TRANSLATION	protein_coding	-	-	5	646	0	1.982	6.6	44.6	0	-4,-7	-	-	12.561	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000114982	ENSMUSP00000110633	TRANSLATION	protein_coding	-	CCDS50315.1	1	666	0	2.732	6.6	44.6	0	-4,-5	-	-	14.211	ALTERNATIVE:1
ENSMUSG00000053477	Tcf4	ENSMUST00000126946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000202477	ENSMUSP00000144219	TRANSLATION	protein_coding	-	-	5	537	0	1.532	5.3	44.6	0	-4,-6	-	-	11.064	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000125154	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000202772	ENSMUSP00000143987	TRANSLATION	protein_coding	-	-	5	606	0	2.732	0	44.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201037	ENSMUSP00000144488	TRANSLATION	protein_coding	stop	-	5	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000078486	ENSMUSP00000077577	TRANSLATION	protein_coding	-	CCDS29329.1	5	670	0	2.732	6.6	44.6	0	-4,-5	-	-	14.211	PRINCIPAL:3
ENSMUSG00000053477	Tcf4	ENSMUST00000207214	ENSMUSP00000146869	TRANSLATION	protein_coding	stop	-	5	117	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000114985	ENSMUSP00000110636	TRANSLATION	protein_coding	-	CCDS29329.1	1	670	0	2.732	6.6	44.6	0	-4,-5	-	-	14.211	PRINCIPAL:3
ENSMUSG00000053477	Tcf4	ENSMUST00000202610	ENSMUSP00000144670	TRANSLATION	protein_coding	-	-	5	610	0	2.732	0	44.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201288	ENSMUSP00000144494	TRANSLATION	protein_coding	stop	-	5	220	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201892	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000209116	ENSMUSP00000147136	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200862	ENSMUSP00000144338	TRANSLATION	protein_coding	stop	-	5	320	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201537	ENSMUSP00000144655	TRANSLATION	protein_coding	stop	-	5	157	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201627	ENSMUSP00000144649	TRANSLATION	protein_coding	stop	-	5	106	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200703	ENSMUSP00000144583	TRANSLATION	protein_coding	stop	-	5	167	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200813	ENSMUSP00000144397	TRANSLATION	protein_coding	stop	-	5	119	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202354	ENSMUSP00000144646	TRANSLATION	protein_coding	-	-	5	641	0	1.982	4.8	44.6	0	-4,-7	-	-	11.85	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000146908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000201205	ENSMUSP00000144273	TRANSLATION	protein_coding	-	-	5	541	0	1.532	4.1	44.6	0	-4,-6	-	-	10.59	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202350	ENSMUSP00000144154	TRANSLATION	protein_coding	stop	-	5	155	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000136151	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000201124	ENSMUSP00000144080	TRANSLATION	protein_coding	stop	-	5	201	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201299	ENSMUSP00000144599	TRANSLATION	protein_coding	stop	-	5	143	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000202765	ENSMUSP00000144332	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201094	ENSMUSP00000144169	TRANSLATION	protein_coding	-	-	5	537	0	1.532	5.3	44.6	0	-4,-6	-	-	11.064	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201235	ENSMUSP00000144473	TRANSLATION	protein_coding	stop	-	5	184	0	0.45	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202116	ENSMUSP00000144512	TRANSLATION	protein_coding	-	CCDS50315.1	1	666	0	2.732	6.6	44.6	0	-4,-5	-	-	14.211	ALTERNATIVE:1
ENSMUSG00000053477	Tcf4	ENSMUST00000155695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053477	Tcf4	ENSMUST00000201181	ENSMUSP00000144376	TRANSLATION	protein_coding	stop	-	5	107	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201631	ENSMUSP00000144285	TRANSLATION	protein_coding	-	-	5	642	0	1.982	5.3	44.6	0	-4,-7	-	-	12.048	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053477	Tcf4	ENSMUST00000202458	ENSMUSP00000143875	TRANSLATION	protein_coding	-	-	5	587	0	1.532	1	44.6	0	-4,-6	-	-	9.366	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202474	ENSMUSP00000143820	TRANSLATION	protein_coding	-	-	5	507	0	1.532	2.9	44.6	0	-4,-7	-	-	10.116	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000114978	ENSMUSP00000110629	TRANSLATION	protein_coding	-	-	1	511	0	1.532	6.6	44.6	0	-4,-5	-	-	11.577	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202937	ENSMUSP00000143857	TRANSLATION	protein_coding	-	-	5	541	0	1.532	4.1	44.6	0	-4,-6	-	-	10.59	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000203002	ENSMUSP00000144315	TRANSLATION	protein_coding	stop	-	5	138	0	1.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201781	ENSMUSP00000144209	TRANSLATION	protein_coding	-	-	5	646	0	1.982	6.6	44.6	0	-4,-7	-	-	12.561	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000202674	ENSMUSP00000144221	TRANSLATION	protein_coding	-	-	5	641	0	1.982	5.3	44.6	0	-4,-7	-	-	12.048	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000201091	ENSMUSP00000144386	TRANSLATION	protein_coding	stop	-	3	271	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000128706	ENSMUSP00000144519	TRANSLATION	protein_coding	-	-	1	178	0	0.45	0	0	0	-4,-7	-	-	0.99	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200921	ENSMUSP00000143892	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000200966	ENSMUSP00000144045	TRANSLATION	protein_coding	stop	-	5	168	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053477	Tcf4	ENSMUST00000114977	ENSMUSP00000110628	TRANSLATION	protein_coding	-	-	1	507	0	1.532	8.6	44.6	0	-4,-5	-	-	12.366	MINOR
ENSMUSG00000009535	Rnmt	ENSMUST00000025427	ENSMUSP00000025427	TRANSLATION	protein_coding	-	CCDS50314.1	1	410	15	7.21	0.5	330.4	0	-4,-5	-	-	10.746	MINOR
ENSMUSG00000009535	Rnmt	ENSMUST00000129849	ENSMUSP00000117459	TRANSLATION	protein_coding	stop	-	2	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009535	Rnmt	ENSMUST00000151833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009535	Rnmt	ENSMUST00000139111	ENSMUSP00000123500	TRANSLATION	protein_coding	stop	-	3	240	7	2.88	0	146.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009535	Rnmt	ENSMUST00000148937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009535	Rnmt	ENSMUST00000131075	ENSMUSP00000122741	TRANSLATION	protein_coding	stop	-	5	205	4	1.8	0	97.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009535	Rnmt	ENSMUST00000009679	ENSMUSP00000009679	TRANSLATION	protein_coding	-	CCDS37852.1	1	465	15	8.21	0.5	418	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000009535	Rnmt	ENSMUST00000139554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034320	Slc26a2	ENSMUST00000181997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034320	Slc26a2	ENSMUST00000037603	ENSMUSP00000040163	TRANSLATION	protein_coding	-	-	1	504	0	0.14	0	403.3	8	-2,-5	-	-	1.062	MINOR
ENSMUSG00000034320	Slc26a2	ENSMUST00000146409	ENSMUSP00000119447	TRANSLATION	protein_coding	-	CCDS29282.1	1	739	0	0.79	1.5	532.3	10	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000034320	Slc26a2	ENSMUST00000148829	ENSMUSP00000114419	TRANSLATION	protein_coding	stop	-	1	225	0	0.32	0	99.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000061808	Ttr	ENSMUST00000075312	ENSMUSP00000074783	TRANSLATION	protein_coding	-	CCDS29085.1	1	147	3	3.75	5.9	71.2	0	3,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000024518	Rax	ENSMUST00000236444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024518	Rax	ENSMUST00000237710	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024518	Rax	ENSMUST00000235720	ENSMUSP00000158513	TRANSLATION	nonsense_mediated_decay	start	-	-	164	0	0.932	0	49.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024518	Rax	ENSMUST00000238035	ENSMUSP00000158348	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024518	Rax	ENSMUST00000237506	ENSMUSP00000157707	TRANSLATION	protein_coding	stop	-	-	215	0	0.8	0	44.6	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024518	Rax	ENSMUST00000025396	ENSMUSP00000025396	TRANSLATION	protein_coding	-	CCDS29311.1	1	342	0	1.13	3.9	118.3	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000024518	Rax	ENSMUST00000236247	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024530	Prelid3a	ENSMUST00000237312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024530	Prelid3a	ENSMUST00000235414	ENSMUSP00000157593	TRANSLATION	protein_coding	start	-	-	215	0	3.75	0	151	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024530	Prelid3a	ENSMUST00000025411	ENSMUSP00000025411	TRANSLATION	protein_coding	-	CCDS37848.1	1	172	0	4.58	13.8	167.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024530	Prelid3a	ENSMUST00000235492	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036880	Acaa2	ENSMUST00000041053	ENSMUSP00000037348	TRANSLATION	protein_coding	-	CCDS29342.1	1	397	16	9.16	16.1	477.4	0	-4,-1	-	-	22	PRINCIPAL:1
ENSMUSG00000036880	Acaa2	ENSMUST00000237306	ENSMUSP00000157638	TRANSLATION	protein_coding	start	-	-	103	1	1.33	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024431	Nr3c1	ENSMUST00000115571	ENSMUSP00000111233	TRANSLATION	protein_coding	-	CCDS37791.1	1	792	28	7.25	1.5	776.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024431	Nr3c1	ENSMUST00000152853	ENSMUSP00000120082	TRANSLATION	protein_coding	stop	-	1	488	6	1.75	0	644.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024431	Nr3c1	ENSMUST00000124115	ENSMUSP00000119630	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	105.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024431	Nr3c1	ENSMUST00000025300	ENSMUSP00000025300	TRANSLATION	protein_coding	-	CCDS37791.1	1	792	28	7.25	1.5	776.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024431	Nr3c1	ENSMUST00000150483	ENSMUSP00000119432	TRANSLATION	protein_coding	stop	-	3	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024431	Nr3c1	ENSMUST00000237944	ENSMUSP00000157832	TRANSLATION	protein_coding	stop	-	-	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024431	Nr3c1	ENSMUST00000097592	ENSMUSP00000095199	TRANSLATION	protein_coding	-	-	1	793	28	7.25	1.5	772.8	0	-4,-5	-	-	17.796	ALTERNATIVE:2
ENSMUSG00000024431	Nr3c1	ENSMUST00000115567	ENSMUSP00000111229	TRANSLATION	protein_coding	-	CCDS37791.1	1	792	28	7.25	1.5	776.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024431	Nr3c1	ENSMUST00000131885	ENSMUSP00000121144	TRANSLATION	protein_coding	stop	-	2	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024570	Rbfa	ENSMUST00000025462	ENSMUSP00000025462	TRANSLATION	protein_coding	-	CCDS29364.1	1	350	0	3.2	0.5	51.6	0	-3,1	-	-	12	PRINCIPAL:1
ENSMUSG00000024570	Rbfa	ENSMUST00000236460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024510	Ftmt	ENSMUST00000025388	ENSMUSP00000025388	TRANSLATION	protein_coding	-	CCDS29246.1	-	237	20	1	3.9	123	0	-4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000024613	Tcof1	ENSMUST00000163446	ENSMUSP00000130454	TRANSLATION	nonsense_mediated_decay	-	-	5	1013	0	0	0	604.5	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000024613	Tcof1	ENSMUST00000177172	ENSMUSP00000134755	TRANSLATION	protein_coding	stop	-	5	1056	0	0	0	308	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000024613	Tcof1	ENSMUST00000176630	ENSMUSP00000135476	TRANSLATION	protein_coding	-	CCDS37836.1	5	1320	0	0	0.5	604.5	0	-3,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000024613	Tcof1	ENSMUST00000177343	ENSMUSP00000135295	TRANSLATION	protein_coding	stop	-	3	167	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024613	Tcof1	ENSMUST00000176088	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024613	Tcof1	ENSMUST00000175934	ENSMUSP00000135639	TRANSLATION	protein_coding	-	CCDS57125.1	2	1356	0	0	0.5	604.5	0	-3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000069324	Gm5096	ENSMUST00000091776	ENSMUSP00000135956	TRANSLATION	protein_coding	-	-	-	407	4	1	10.8	170.6	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000048799	Cep120	ENSMUST00000235928	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048799	Cep120	ENSMUST00000049811	ENSMUSP00000062433	TRANSLATION	protein_coding	-	CCDS37822.1	1	988	0	3.5	5.1	341.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000048799	Cep120	ENSMUST00000237062	ENSMUSP00000158481	TRANSLATION	protein_coding	-	-	-	929	0	3.5	0	341.9	0	-4,-6	-	-	12	MINOR
ENSMUSG00000048799	Cep120	ENSMUST00000237145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000235798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000235552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000237073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000237354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000236001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000237972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000001415	ENSMUSP00000001415	TRANSLATION	protein_coding	-	CCDS29157.1	5	486	0	8.09	3.9	154.8	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000117679	Apbb3	ENSMUST00000238072	ENSMUSP00000157386	TRANSLATION	protein_coding	start/stop	-	-	57	0	0.5	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000117679	Apbb3	ENSMUST00000237795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117679	Apbb3	ENSMUST00000237965	ENSMUSP00000158188	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	1.15	0	28.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000117679	Apbb3	ENSMUST00000237679	ENSMUSP00000157608	TRANSLATION	protein_coding	start/stop	-	-	63	0	1.66	0	37.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000117679	Apbb3	ENSMUST00000238112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024552	Slc14a2	ENSMUST00000237674	ENSMUSP00000157851	TRANSLATION	protein_coding	-	CCDS29361.1	-	930	11	14.9	1.5	715.5	29	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024552	Slc14a2	ENSMUST00000237290	ENSMUSP00000157855	TRANSLATION	protein_coding	-	-	-	397	5	7.3	1.5	368.3	13	-4,-5	-	-	1.998	MINOR
ENSMUSG00000024552	Slc14a2	ENSMUST00000236281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024552	Slc14a2	ENSMUST00000163367	ENSMUSP00000126416	TRANSLATION	protein_coding	-	CCDS50331.1	1	323	6	6.5	0.5	326	15	-1,-3	-	-	2.664	MINOR
ENSMUSG00000024552	Slc14a2	ENSMUST00000235389	ENSMUSP00000158141	TRANSLATION	protein_coding	-	-	-	461	6	7.6	1.5	347.2	16	-4,-5	-	-	2.664	MINOR
ENSMUSG00000024552	Slc14a2	ENSMUST00000025434	ENSMUSP00000025434	TRANSLATION	protein_coding	-	CCDS29361.1	5	930	11	14.9	1.5	715.5	29	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044595	Dnd1	ENSMUST00000061522	ENSMUSP00000054412	TRANSLATION	protein_coding	-	CCDS29163.2	1	352	0	0.48	5.1	130.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000044595	Dnd1	ENSMUST00000124038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044595	Dnd1	ENSMUST00000155827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024525	Impa2	ENSMUST00000025403	ENSMUSP00000025403	TRANSLATION	protein_coding	-	CCDS29320.1	1	290	9	7.5	3.9	272.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024525	Impa2	ENSMUST00000235632	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024525	Impa2	ENSMUST00000237149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024525	Impa2	ENSMUST00000236637	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073565	Prr16	ENSMUST00000116639	ENSMUSP00000112338	TRANSLATION	protein_coding	-	CCDS37818.1	1	304	0	0	6.5	256.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000073565	Prr16	ENSMUST00000235541	ENSMUSP00000158421	TRANSLATION	nonsense_mediated_decay	-	-	-	304	0	0	6.5	256.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046387	Pcdhb17	ENSMUST00000053856	ENSMUSP00000055072	TRANSLATION	protein_coding	-	CCDS29183.1	-	799	50	0.8	1.5	448.9	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000034028	Cd226	ENSMUST00000237979	ENSMUSP00000157554	TRANSLATION	nonsense_mediated_decay	-	-	-	187	1	1.3122	0	41.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000236835	ENSMUSP00000158454	TRANSLATION	protein_coding	stop	-	-	119	1	0.666	0	39.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000236452	ENSMUSP00000158239	TRANSLATION	protein_coding	-	-	-	129	0	0	0.5	0	3	-4,-7	-	-	0	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000236644	ENSMUSP00000158110	TRANSLATION	protein_coding	stop	-	-	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000235651	ENSMUSP00000158334	TRANSLATION	nonsense_mediated_decay	-	-	-	154	1	0.7122	0	41.1	0	4,-1	-	-	-1	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000037142	ENSMUSP00000043551	TRANSLATION	protein_coding	-	CCDS29392.1	1	333	1	1.3122	1.5	75.1	3	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000034028	Cd226	ENSMUST00000097496	ENSMUSP00000095104	TRANSLATION	protein_coding	-	CCDS29391.1	1	220	1	0.6	0.5	36.8	3	-4,-6	-	-	5.682	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000237110	ENSMUSP00000158575	TRANSLATION	protein_coding	stop	-	-	24	1	0.066	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000034028	Cd226	ENSMUST00000236450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034028	Cd226	ENSMUST00000236828	ENSMUSP00000158324	TRANSLATION	protein_coding	-	CCDS29392.1	-	333	1	1.3122	1.5	75.1	3	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073573	Spink11	ENSMUST00000239421	ENSMUSP00000159307	TRANSLATION	protein_coding	-	-	-	88	0	0	0	32.8	0	2,-3	-	-	6	ALTERNATIVE:2
ENSMUSG00000073573	Spink11	ENSMUST00000185266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073573	Spink11	ENSMUST00000097587	ENSMUSP00000095194	TRANSLATION	protein_coding	-	CCDS50274.1	1	114	0	0	0.5	32.8	0	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000102742	Pcdhga11	ENSMUST00000061279	ENSMUSP00000058362	TRANSLATION	protein_coding	-	CCDS37784.1	1	933	50	1	0.5	525.7	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056162	Cndp1	ENSMUST00000236723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056162	Cndp1	ENSMUST00000236714	ENSMUSP00000157579	TRANSLATION	protein_coding	stop	-	-	74	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056162	Cndp1	ENSMUST00000235618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056162	Cndp1	ENSMUST00000130579	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056162	Cndp1	ENSMUST00000070139	ENSMUSP00000069699	TRANSLATION	protein_coding	-	CCDS29382.1	1	492	12	10.25	1.5	163.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056162	Cndp1	ENSMUST00000145981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024588	Fech	ENSMUST00000025484	ENSMUSP00000025484	TRANSLATION	protein_coding	-	-	1	348	33	10.75	2.9	356.7	0	-4,-5	-	-	16.464	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000237891	ENSMUSP00000158505	TRANSLATION	protein_coding	stop	-	-	215	12	4.33	0	155.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000235356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024588	Fech	ENSMUST00000238149	ENSMUSP00000158387	TRANSLATION	nonsense_mediated_decay	start	-	-	61	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000237717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024588	Fech	ENSMUST00000237680	ENSMUSP00000157946	TRANSLATION	nonsense_mediated_decay	-	-	-	122	3	1.33	0	32.2	0	-3,1	-	-	-1	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000235766	ENSMUSP00000157863	TRANSLATION	protein_coding	-	-	-	366	23	6.83	0	255.3	0	-3,1	-	-	0	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000235843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024588	Fech	ENSMUST00000235338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024588	Fech	ENSMUST00000236586	ENSMUSP00000157791	TRANSLATION	protein_coding	-	CCDS29303.1	-	422	33	11.08	2.7	371.3	0	-3,1	-	-	18	PRINCIPAL:2
ENSMUSG00000024588	Fech	ENSMUST00000238082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024588	Fech	ENSMUST00000237502	ENSMUSP00000157798	TRANSLATION	protein_coding	-	-	-	395	28	9.68	0	359.3	0	-3,1	-	-	11.142	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000235947	ENSMUSP00000158161	TRANSLATION	nonsense_mediated_decay	start	-	-	149	5	2.03	0	58	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000235215	ENSMUSP00000158210	TRANSLATION	nonsense_mediated_decay	-	-	-	37	3	1.066	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024588	Fech	ENSMUST00000237358	ENSMUSP00000158038	TRANSLATION	protein_coding	-	-	-	417	33	11.08	0	371.3	0	-2,0	-	-	18	ALTERNATIVE:2
ENSMUSG00000003779	Kif20a	ENSMUST00000166044	ENSMUSP00000132659	TRANSLATION	protein_coding	-	CCDS29131.1	1	887	11	8.788	6.3	353.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003779	Kif20a	ENSMUST00000167161	ENSMUSP00000130045	TRANSLATION	protein_coding	-	CCDS29131.1	1	887	11	8.788	6.3	353.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003779	Kif20a	ENSMUST00000237481	ENSMUSP00000158507	TRANSLATION	nonsense_mediated_decay	-	-	-	312	10	3.38	0	97.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003779	Kif20a	ENSMUST00000237407	ENSMUSP00000157839	TRANSLATION	protein_coding	-	CCDS29131.1	-	887	11	8.788	6.3	353.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000003779	Kif20a	ENSMUST00000235174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003779	Kif20a	ENSMUST00000236114	ENSMUSP00000157757	TRANSLATION	protein_coding	start/stop	-	-	277	1	3.011	0	132.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000069378	Prdm6	ENSMUST00000154557	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069378	Prdm6	ENSMUST00000236096	ENSMUSP00000158104	TRANSLATION	protein_coding	stop	-	-	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069378	Prdm6	ENSMUST00000091900	ENSMUSP00000089513	TRANSLATION	protein_coding	-	CCDS29253.1	1	596	18	4.2	0.5	93.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069378	Prdm6	ENSMUST00000115399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069378	Prdm6	ENSMUST00000115398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024424	Ttc39c	ENSMUST00000234974	ENSMUSP00000156993	TRANSLATION	nonsense_mediated_decay	-	-	-	202	0	0	0	192	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024424	Ttc39c	ENSMUST00000143388	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024424	Ttc39c	ENSMUST00000234848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024424	Ttc39c	ENSMUST00000141060	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024424	Ttc39c	ENSMUST00000025294	ENSMUSP00000025294	TRANSLATION	protein_coding	-	-	1	522	0	0	5.9	426	0	-4,-7	-	-	6.165	MINOR
ENSMUSG00000024424	Ttc39c	ENSMUST00000234255	ENSMUSP00000157255	TRANSLATION	protein_coding	-	-	-	508	0	0	0	426	0	-4,-7	-	-	4.152	MINOR
ENSMUSG00000024424	Ttc39c	ENSMUST00000234966	ENSMUSP00000157144	TRANSLATION	protein_coding	-	CCDS29065.1	-	580	0	0	8.3	456.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024424	Ttc39c	ENSMUST00000169401	ENSMUSP00000133127	TRANSLATION	protein_coding	-	-	5	522	0	0	5.9	426	0	-4,-7	-	-	6.165	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000062446	ENSMUSP00000053495	TRANSLATION	protein_coding	-	-	1	176	0	1.76	0	134.4	0	-4,-1	-	-	6	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000091789	ENSMUSP00000089393	TRANSLATION	protein_coding	-	CCDS29374.1	1	195	0	0	2.7	66.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000075372	ENSMUSP00000074836	TRANSLATION	protein_coding	-	-	1	117	0	1.43	0	151.6	0	-4,-1	-	-	4.902	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000143506	ENSMUSP00000138313	TRANSLATION	nonsense_mediated_decay	-	-	1	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000114674	ENSMUSP00000110322	TRANSLATION	protein_coding	-	-	1	143	0	1.43	0	135.9	0	-4,-1	-	-	4.872	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000132369	ENSMUSP00000114230	TRANSLATION	protein_coding	-	CCDS29379.1	1	158	0	1.43	1.5	220.1	0	-4,-1	-	-	9.012	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000047865	ENSMUSP00000046185	TRANSLATION	protein_coding	-	CCDS29373.1	1	250	0	1.43	1.5	148.6	0	-4,-5	-	-	4.872	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000150952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041607	Mbp	ENSMUST00000153478	ENSMUSP00000114630	TRANSLATION	protein_coding	-	CCDS37875.1	1	184	0	1.43	0.5	202.4	0	-4,-1	-	-	7.95	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000133193	ENSMUSP00000116019	TRANSLATION	protein_coding	-	-	1	128	0	1.76	1.5	167.2	0	-4,-1	-	-	6.966	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000123251	ENSMUSP00000121855	TRANSLATION	protein_coding	-	CCDS29376.1	1	195	0	1.76	1.5	233.8	0	-4,-1	-	-	10.962	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000142850	ENSMUSP00000115082	TRANSLATION	protein_coding	-	CCDS29377.1	2	169	0	1.76	2.7	251.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000041607	Mbp	ENSMUST00000152071	ENSMUSP00000115409	TRANSLATION	protein_coding	-	CCDS29378.1	1	154	0	1.76	1.5	152.1	0	-4,-1	-	-	6.06	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000102812	ENSMUSP00000099876	TRANSLATION	protein_coding	-	-	2	191	0	1.76	0	237.1	0	-4,0	-	-	11.16	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000080658	ENSMUSP00000079488	TRANSLATION	protein_coding	-	-	1	150	0	1.76	0	149.3	0	-4,0	-	-	6	MINOR
ENSMUSG00000041607	Mbp	ENSMUST00000114676	ENSMUSP00000110324	TRANSLATION	protein_coding	-	-	1	55	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000236779	ENSMUSP00000158033	TRANSLATION	protein_coding	-	-	-	871	0	11.24	1.5	758.5	7	-4,-5	-	-	2.502	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000236124	ENSMUSP00000157862	TRANSLATION	protein_coding	-	-	-	952	0	12.99	1.5	872.2	11	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024485	Slc4a9	ENSMUST00000235848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024485	Slc4a9	ENSMUST00000238191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024485	Slc4a9	ENSMUST00000237174	ENSMUSP00000158071	TRANSLATION	protein_coding	-	CCDS70884.1	-	929	0	12.24	0.5	758.6	10	-4,-5	-	-	4.5	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000237595	ENSMUSP00000158130	TRANSLATION	protein_coding	start	-	-	821	0	11.99	0	814.1	11	-4,-6	-	-	-1	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000235382	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024485	Slc4a9	ENSMUST00000237243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024485	Slc4a9	ENSMUST00000115694	ENSMUSP00000111358	TRANSLATION	protein_coding	-	CCDS70884.1	5	929	0	12.24	0.5	758.6	10	-4,-5	-	-	4.5	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000236126	ENSMUSP00000158410	TRANSLATION	protein_coding	-	-	-	918	0	12.39	0.5	792.9	11	-4,-5	-	-	6.042	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000235181	ENSMUSP00000157460	TRANSLATION	protein_coding	-	CCDS29154.1	-	880	0	10.24	1.5	698.2	11	-4,-5	-	-	0.498	MINOR
ENSMUSG00000024485	Slc4a9	ENSMUST00000074298	ENSMUSP00000073910	TRANSLATION	protein_coding	-	CCDS29154.1	5	880	0	10.24	1.5	698.2	11	-4,-5	-	-	0.498	MINOR
ENSMUSG00000051486	Pcdhb11	ENSMUST00000053073	ENSMUSP00000056148	TRANSLATION	protein_coding	-	CCDS29178.1	-	797	55	1	1.5	457.3	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024512	Dynap	ENSMUST00000025390	ENSMUSP00000025390	TRANSLATION	protein_coding	-	CCDS50316.1	1	161	0	0	0.5	48	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000003778	Brd8	ENSMUST00000127159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003778	Brd8	ENSMUST00000115766	ENSMUSP00000111432	TRANSLATION	protein_coding	-	CCDS70880.1	1	881	0	2.19	2.9	74.5	0	-4,-6	-	-	12.876	MINOR
ENSMUSG00000003778	Brd8	ENSMUST00000152612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003778	Brd8	ENSMUST00000003876	ENSMUSP00000003876	TRANSLATION	protein_coding	-	CCDS50248.1	1	951	0	2.19	7.5	74.5	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000003778	Brd8	ENSMUST00000153569	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003778	Brd8	ENSMUST00000097626	ENSMUSP00000095229	TRANSLATION	protein_coding	-	CCDS70879.1	1	878	0	2.19	6.3	74.5	0	-4,-6	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000003778	Brd8	ENSMUST00000145431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003778	Brd8	ENSMUST00000115765	ENSMUSP00000111431	TRANSLATION	protein_coding	-	-	1	954	0	2.19	0.5	74.5	0	-4,-6	-	-	12	MINOR
ENSMUSG00000046727	Cystm1	ENSMUST00000236374	ENSMUSP00000157423	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046727	Cystm1	ENSMUST00000144158	ENSMUSP00000114199	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046727	Cystm1	ENSMUST00000237375	ENSMUSP00000158042	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046727	Cystm1	ENSMUST00000235576	ENSMUSP00000158229	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046727	Cystm1	ENSMUST00000152804	ENSMUSP00000129683	TRANSLATION	protein_coding	-	CCDS37770.1	3	106	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000046727	Cystm1	ENSMUST00000237329	ENSMUSP00000157821	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046727	Cystm1	ENSMUST00000235864	ENSMUSP00000158380	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046727	Cystm1	ENSMUST00000236024	ENSMUSP00000158471	TRANSLATION	nonsense_mediated_decay	-	-	-	76	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046727	Cystm1	ENSMUST00000139727	ENSMUSP00000115138	TRANSLATION	protein_coding	-	CCDS37770.1	5	106	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000046727	Cystm1	ENSMUST00000236593	ENSMUSP00000158346	TRANSLATION	protein_coding	-	CCDS37770.1	-	106	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000046727	Cystm1	ENSMUST00000145439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046727	Cystm1	ENSMUST00000235403	ENSMUSP00000157550	TRANSLATION	protein_coding	-	-	-	104	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000046727	Cystm1	ENSMUST00000050584	ENSMUSP00000051708	TRANSLATION	protein_coding	-	-	1	104	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000042439	Zfp532	ENSMUST00000236694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042439	Zfp532	ENSMUST00000182319	ENSMUSP00000138371	TRANSLATION	protein_coding	stop	-	5	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182973	ENSMUSP00000138303	TRANSLATION	protein_coding	stop	-	3	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182655	ENSMUSP00000138196	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000049016	ENSMUSP00000036582	TRANSLATION	protein_coding	-	CCDS29307.1	1	1036	27	1	0.5	85.2	0	-4,-5	-	-	8.118	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000183319	ENSMUSP00000138199	TRANSLATION	protein_coding	stop	-	3	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182140	ENSMUSP00000138704	TRANSLATION	protein_coding	stop	-	3	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000237712	ENSMUSP00000158009	TRANSLATION	protein_coding	stop	-	-	230	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000235822	ENSMUSP00000157961	TRANSLATION	protein_coding	-	-	-	1304	47	2.83	0.5	85.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042439	Zfp532	ENSMUST00000237756	ENSMUSP00000157850	TRANSLATION	nonsense_mediated_decay	start	-	-	75	3	0.36	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182979	ENSMUSP00000138225	TRANSLATION	protein_coding	stop	-	1	779	10	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182852	ENSMUSP00000138663	TRANSLATION	protein_coding	-	-	5	1304	47	2.83	0.5	85.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042439	Zfp532	ENSMUST00000237886	ENSMUSP00000158433	TRANSLATION	protein_coding	stop	-	-	160	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000183326	ENSMUSP00000138155	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000237931	ENSMUSP00000158172	TRANSLATION	protein_coding	stop	-	-	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000237714	ENSMUSP00000158253	TRANSLATION	protein_coding	-	-	-	1304	47	2.83	0.5	85.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042439	Zfp532	ENSMUST00000237553	ENSMUSP00000157481	TRANSLATION	protein_coding	-	-	-	1304	47	2.83	0.5	85.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042439	Zfp532	ENSMUST00000236633	ENSMUSP00000158515	TRANSLATION	protein_coding	stop	-	-	73	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182478	ENSMUSP00000138315	TRANSLATION	nonsense_mediated_decay	-	-	2	900	23	1.77	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000235669	ENSMUSP00000158241	TRANSLATION	protein_coding	stop	-	-	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000183303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042439	Zfp532	ENSMUST00000183184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042439	Zfp532	ENSMUST00000235493	ENSMUSP00000157486	TRANSLATION	protein_coding	-	-	-	1304	47	2.83	0.5	85.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042439	Zfp532	ENSMUST00000169679	ENSMUSP00000129390	TRANSLATION	protein_coding	-	CCDS29307.1	5	1036	27	1	0.5	85.2	0	-4,-5	-	-	8.118	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000182684	ENSMUSP00000138604	TRANSLATION	protein_coding	stop	-	3	219	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000183236	ENSMUSP00000138783	TRANSLATION	protein_coding	stop	-	3	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042439	Zfp532	ENSMUST00000236523	ENSMUSP00000158484	TRANSLATION	protein_coding	stop	-	-	82	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024400	Wdr33	ENSMUST00000234957	ENSMUSP00000157157	TRANSLATION	protein_coding	-	CCDS50242.1	-	271	0	3.45	0.5	46.3	0	-4,-2	-	-	1.95	MINOR
ENSMUSG00000024400	Wdr33	ENSMUST00000234937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024400	Wdr33	ENSMUST00000025264	ENSMUSP00000025264	TRANSLATION	protein_coding	-	CCDS29112.1	5	1330	0	6.36	1.5	116.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024400	Wdr33	ENSMUST00000082319	ENSMUSP00000080936	TRANSLATION	protein_coding	-	-	1	255	0	3.36	0.5	46.3	0	-4,-2	-	-	1.77	MINOR
ENSMUSG00000024400	Wdr33	ENSMUST00000234302	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024400	Wdr33	ENSMUST00000234137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024400	Wdr33	ENSMUST00000234344	ENSMUSP00000157238	TRANSLATION	protein_coding	-	-	-	312	0	2.12	0.5	14.9	0	-4,-2	-	-	0	MINOR
ENSMUSG00000091896	Ube2d2a	ENSMUST00000236484	ENSMUSP00000158165	TRANSLATION	protein_coding	start	-	-	92	0	2.99	0	95.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000091896	Ube2d2a	ENSMUST00000236235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091896	Ube2d2a	ENSMUST00000237984	ENSMUSP00000158464	TRANSLATION	protein_coding	stop	-	-	50	0	1.712	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091896	Ube2d2a	ENSMUST00000235351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091896	Ube2d2a	ENSMUST00000236550	ENSMUSP00000157903	TRANSLATION	protein_coding	start	-	-	93	0	2.91	0	96.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091896	Ube2d2a	ENSMUST00000237482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091896	Ube2d2a	ENSMUST00000235170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091896	Ube2d2a	ENSMUST00000235516	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091896	Ube2d2a	ENSMUST00000167406	ENSMUSP00000131206	TRANSLATION	protein_coding	-	CCDS50254.1	5	147	0	4.82	19.5	181.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000091896	Ube2d2a	ENSMUST00000170693	ENSMUSP00000132446	TRANSLATION	protein_coding	-	CCDS50254.1	1	147	0	4.82	19.5	181.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000060534	Dcc	ENSMUST00000073379	ENSMUSP00000073094	TRANSLATION	protein_coding	-	-	5	1427	0	20.905	5.9	824.2	1	0,-3	-	-	12.786	MINOR
ENSMUSG00000060534	Dcc	ENSMUST00000114943	ENSMUSP00000110593	TRANSLATION	protein_coding	-	CCDS29336.1	1	1447	0	21.505	8.4	824.2	1	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000060534	Dcc	ENSMUST00000126030	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000420	Galnt1	ENSMUST00000169474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000420	Galnt1	ENSMUST00000164998	ENSMUSP00000132411	TRANSLATION	protein_coding	stop	-	5	142	3	2.25	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000000420	Galnt1	ENSMUST00000170191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000420	Galnt1	ENSMUST00000178605	ENSMUSP00000137427	TRANSLATION	protein_coding	-	CCDS29100.1	1	559	23	11.75	17.3	234	3	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000000420	Galnt1	ENSMUST00000171583	ENSMUSP00000131755	TRANSLATION	nonsense_mediated_decay	-	-	3	62	0	0	0	0	3	-1,-5	-	-	-1	MINOR
ENSMUSG00000000420	Galnt1	ENSMUST00000000430	ENSMUSP00000000430	TRANSLATION	protein_coding	-	CCDS29100.1	1	559	23	11.75	17.3	234	3	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000000420	Galnt1	ENSMUST00000164066	ENSMUSP00000130238	TRANSLATION	nonsense_mediated_decay	start	-	3	78	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000420	Galnt1	ENSMUST00000170243	ENSMUSP00000132142	TRANSLATION	protein_coding	-	CCDS29100.1	1	559	23	11.75	17.3	234	3	-1,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000032818	Loxhd1	ENSMUST00000123410	ENSMUSP00000120991	TRANSLATION	protein_coding	-	-	5	2080	0	7.54	0	894.8	0	-4,-5	-	-	5.772	MINOR
ENSMUSG00000032818	Loxhd1	ENSMUST00000035501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032818	Loxhd1	ENSMUST00000096547	ENSMUSP00000094294	TRANSLATION	protein_coding	-	CCDS50326.1	1	2068	0	8.54	1.7	932.6	0	-4,-5	-	-	10.038	MINOR
ENSMUSG00000032818	Loxhd1	ENSMUST00000123166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032818	Loxhd1	ENSMUST00000148341	ENSMUSP00000114988	TRANSLATION	protein_coding	-	-	5	2216	0	8.54	2.2	965.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024477	Pggt1b	ENSMUST00000237757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024477	Pggt1b	ENSMUST00000236999	ENSMUSP00000157885	TRANSLATION	protein_coding	-	-	-	300	4	8	0	69.2	0	-4,-5	-	-	4.206	MINOR
ENSMUSG00000024477	Pggt1b	ENSMUST00000236205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024477	Pggt1b	ENSMUST00000236216	ENSMUSP00000158214	TRANSLATION	protein_coding	-	CCDS29230.1	-	377	14	10	7.5	132.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024477	Pggt1b	ENSMUST00000235465	ENSMUSP00000158351	TRANSLATION	nonsense_mediated_decay	-	-	-	138	0	2.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024477	Pggt1b	ENSMUST00000236527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024477	Pggt1b	ENSMUST00000235979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024477	Pggt1b	ENSMUST00000025354	ENSMUSP00000025354	TRANSLATION	nonsense_mediated_decay	-	-	1	97	0	1.21	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024477	Pggt1b	ENSMUST00000236368	ENSMUSP00000158221	TRANSLATION	protein_coding	start	-	-	107	2	1.5	0	19.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024600	Slc27a6	ENSMUST00000025500	ENSMUSP00000025500	TRANSLATION	protein_coding	-	CCDS37828.1	1	619	23	5.46	2.7	260.7	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000056124	B4galt6	ENSMUST00000070080	ENSMUSP00000066515	TRANSLATION	protein_coding	-	CCDS29086.1	1	382	16	4.92	15.3	272.3	0	-2,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000044719	E230025N22Rik	ENSMUST00000235134	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044719	E230025N22Rik	ENSMUST00000115682	ENSMUSP00000111346	TRANSLATION	protein_coding	-	CCDS37771.1	1	482	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000103800	Pcdha8	ENSMUST00000194038	ENSMUSP00000142159	TRANSLATION	protein_coding	-	CCDS79620.1	1	946	50	1	1.5	528	0	-1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000042660	Wdr55	ENSMUST00000049323	ENSMUSP00000039010	TRANSLATION	protein_coding	-	CCDS29162.1	1	388	0	4.15	1.5	47.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042660	Wdr55	ENSMUST00000235748	ENSMUSP00000157945	TRANSLATION	nonsense_mediated_decay	start	-	-	46	0	0.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042660	Wdr55	ENSMUST00000236324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036855	Gjd4	ENSMUST00000041007	ENSMUSP00000035472	TRANSLATION	protein_coding	-	CCDS29049.1	1	364	0	0.47	1.5	219.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036585	Fgf1	ENSMUST00000237356	ENSMUSP00000157389	TRANSLATION	protein_coding	-	-	-	104	1	2.78	0	68.3	0	-4,-5	-	-	6.648	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000236630	ENSMUSP00000157968	TRANSLATION	protein_coding	-	CCDS29204.1	-	155	7	3.58	17	145.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036585	Fgf1	ENSMUST00000040647	ENSMUSP00000045710	TRANSLATION	protein_coding	-	CCDS29204.1	1	155	7	3.58	17	145.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036585	Fgf1	ENSMUST00000139972	ENSMUSP00000122390	TRANSLATION	protein_coding	stop	-	3	78	1	2.08	0	43.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000236060	ENSMUSP00000158462	TRANSLATION	protein_coding	-	-	-	104	1	2.78	0	68.3	0	-4,-5	-	-	6.648	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000115582	ENSMUSP00000111245	TRANSLATION	protein_coding	-	CCDS29204.1	1	155	7	3.58	17	145.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036585	Fgf1	ENSMUST00000147607	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036585	Fgf1	ENSMUST00000117566	ENSMUSP00000113292	TRANSLATION	protein_coding	-	-	5	60	1	1.33	3.6	24.4	0	-4,-5	-	-	3.01	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000131348	ENSMUSP00000123293	TRANSLATION	nonsense_mediated_decay	-	-	1	78	1	1.33	0	23.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000235922	ENSMUSP00000157856	TRANSLATION	protein_coding	-	-	-	104	1	2.78	0	68.3	0	-4,-5	-	-	6.648	MINOR
ENSMUSG00000036585	Fgf1	ENSMUST00000134864	ENSMUSP00000122105	TRANSLATION	protein_coding	stop	-	2	49	1	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000235619	ENSMUSP00000157636	TRANSLATION	protein_coding	-	-	-	417	0	0	0	22.8	0	0,-3	-	-	5.676	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000237253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024357	Sil1	ENSMUST00000025215	ENSMUSP00000025215	TRANSLATION	protein_coding	-	CCDS29140.1	1	465	0	0	3.9	24.1	0	0,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000024357	Sil1	ENSMUST00000236007	ENSMUSP00000157932	TRANSLATION	protein_coding	-	-	-	53	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000237896	ENSMUSP00000157521	TRANSLATION	protein_coding	-	-	-	327	0	0	0	22.8	0	-4,-5	-	-	5.676	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000235691	ENSMUSP00000157444	TRANSLATION	protein_coding	stop	-	-	20	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000237309	ENSMUSP00000157506	TRANSLATION	protein_coding	start	-	-	119	0	0	0	24.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000235778	ENSMUSP00000157667	TRANSLATION	protein_coding	stop	-	-	28	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000235524	ENSMUSP00000157758	TRANSLATION	protein_coding	-	-	-	38	0	0	0	0	0	0,-3	-	-	0	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000237232	ENSMUSP00000158247	TRANSLATION	protein_coding	stop	-	-	80	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024357	Sil1	ENSMUST00000236387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024420	Zfp521	ENSMUST00000234410	ENSMUSP00000157321	TRANSLATION	protein_coding	-	CCDS37740.1	-	1311	99	2.018	8.3	197.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024420	Zfp521	ENSMUST00000234480	ENSMUSP00000157232	TRANSLATION	nonsense_mediated_decay	start	-	-	540	36	2.018	0	75.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024420	Zfp521	ENSMUST00000234237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024420	Zfp521	ENSMUST00000234025	ENSMUSP00000157169	TRANSLATION	protein_coding	stop	-	-	101	6	0.6	0	23.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024420	Zfp521	ENSMUST00000234523	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024420	Zfp521	ENSMUST00000025288	ENSMUSP00000025288	TRANSLATION	protein_coding	-	CCDS37740.1	1	1311	99	2.018	8.3	197.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024420	Zfp521	ENSMUST00000234502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035984	Nme5	ENSMUST00000155114	ENSMUSP00000116092	TRANSLATION	nonsense_mediated_decay	-	-	2	43	1	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035984	Nme5	ENSMUST00000134875	ENSMUSP00000118213	TRANSLATION	nonsense_mediated_decay	-	-	1	114	7	1.44	0	90.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035984	Nme5	ENSMUST00000079287	ENSMUSP00000078269	TRANSLATION	protein_coding	-	CCDS29130.1	1	211	12	2.44	11.7	195	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000035984	Nme5	ENSMUST00000154342	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014294	Ndufa2	ENSMUST00000014438	ENSMUSP00000014438	TRANSLATION	protein_coding	-	CCDS29161.1	1	99	0	2.75	15.5	54.5	0	-4,0	-	-	16	PRINCIPAL:1
ENSMUSG00000056812	St8sia3	ENSMUST00000237956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056812	St8sia3	ENSMUST00000129518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056812	St8sia3	ENSMUST00000025477	ENSMUSP00000025477	TRANSLATION	protein_coding	-	CCDS29301.1	1	380	9	3	11.8	249.2	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000056812	St8sia3	ENSMUST00000237474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056812	St8sia3	ENSMUST00000139622	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056812	St8sia3	ENSMUST00000134064	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056812	St8sia3	ENSMUST00000237770	ENSMUSP00000158392	TRANSLATION	protein_coding	-	CCDS29301.1	-	380	9	3	11.8	249.2	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039616	Mocos	ENSMUST00000068006	ENSMUSP00000063609	TRANSLATION	protein_coding	-	CCDS37750.1	1	862	14	3.84	1.5	294.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039616	Mocos	ENSMUST00000234253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000177070	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000162892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000175739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000175925	ENSMUSP00000135125	TRANSLATION	nonsense_mediated_decay	-	-	5	105	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024238	Zeb1	ENSMUST00000160522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024238	Zeb1	ENSMUST00000025081	ENSMUSP00000025081	TRANSLATION	protein_coding	-	CCDS29039.1	1	1117	26	3.28	0.5	111.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024238	Zeb1	ENSMUST00000159390	ENSMUSP00000124395	TRANSLATION	protein_coding	stop	-	3	293	15	2.44	0	77.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024238	Zeb1	ENSMUST00000160910	ENSMUSP00000124815	TRANSLATION	protein_coding	stop	-	3	154	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024238	Zeb1	ENSMUST00000177030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000161295	ENSMUSP00000124507	TRANSLATION	nonsense_mediated_decay	start	-	5	20	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024238	Zeb1	ENSMUST00000159477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024238	Zeb1	ENSMUST00000224200	ENSMUSP00000157056	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000023036	Pcdhgc4	ENSMUST00000193222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023036	Pcdhgc4	ENSMUST00000066140	ENSMUSP00000068846	TRANSLATION	protein_coding	-	CCDS29193.1	1	941	50	0.6	4.1	432.4	0	3,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000023036	Pcdhgc4	ENSMUST00000195239	ENSMUSP00000141244	TRANSLATION	protein_coding	-	-	3	131	0	0	0	97	0	-4,-7	-	-	0	MINOR
ENSMUSG00000071847	Apcdd1	ENSMUST00000096554	ENSMUSP00000094302	TRANSLATION	protein_coding	-	CCDS37843.1	1	514	0	0	3.9	436.4	0	1,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000071847	Apcdd1	ENSMUST00000163716	ENSMUSP00000125868	TRANSLATION	protein_coding	-	CCDS37843.1	1	514	0	0	3.9	436.4	0	1,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000071847	Apcdd1	ENSMUST00000236135	ENSMUSP00000157539	TRANSLATION	protein_coding	-	CCDS37843.1	-	514	0	0	3.9	436.4	0	1,-3	-	-	7	PRINCIPAL:1
ENSMUSG00000071847	Apcdd1	ENSMUST00000237428	ENSMUSP00000157618	TRANSLATION	nonsense_mediated_decay	-	-	-	35	0	0	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000071847	Apcdd1	ENSMUST00000236605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024493	Lars	ENSMUST00000097590	ENSMUSP00000095197	TRANSLATION	protein_coding	-	CCDS37796.1	1	1178	17	17.34	6.3	200	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024493	Lars	ENSMUST00000236226	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024493	Lars	ENSMUST00000237882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024493	Lars	ENSMUST00000237587	ENSMUSP00000158450	TRANSLATION	nonsense_mediated_decay	start	-	-	213	11	2.16	0	39.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024493	Lars	ENSMUST00000236826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024493	Lars	ENSMUST00000236304	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024493	Lars	ENSMUST00000235432	ENSMUSP00000157918	TRANSLATION	nonsense_mediated_decay	-	-	-	102	6	1.62	0	46.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024493	Lars	ENSMUST00000237520	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024493	Lars	ENSMUST00000236102	ENSMUSP00000157939	TRANSLATION	protein_coding	stop	-	-	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024493	Lars	ENSMUST00000235845	ENSMUSP00000157407	TRANSLATION	nonsense_mediated_decay	start	-	-	54	0	0.5	0	30.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037013	Ss18	ENSMUST00000040924	ENSMUSP00000046320	TRANSLATION	protein_coding	-	CCDS29070.1	1	418	0	0	12.6	106.3	0	-4,-2	-	-	9.316	PRINCIPAL:3
ENSMUSG00000037013	Ss18	ENSMUST00000235011	ENSMUSP00000157229	TRANSLATION	protein_coding	start	-	-	143	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037013	Ss18	ENSMUST00000235043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037013	Ss18	ENSMUST00000234544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037013	Ss18	ENSMUST00000234737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037013	Ss18	ENSMUST00000092041	ENSMUSP00000089673	TRANSLATION	protein_coding	-	CCDS57116.1	1	387	0	0	15	106.3	0	-4,-2	-	-	10	ALTERNATIVE:1
ENSMUSG00000037013	Ss18	ENSMUST00000234120	ENSMUSP00000157190	TRANSLATION	nonsense_mediated_decay	-	-	-	41	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037013	Ss18	ENSMUST00000234224	ENSMUSP00000157300	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	63.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037013	Ss18	ENSMUST00000234524	ENSMUSP00000157096	TRANSLATION	protein_coding	-	-	-	313	0	0	0.5	106.3	0	-4,-2	-	-	6	MINOR
ENSMUSG00000037013	Ss18	ENSMUST00000238844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037013	Ss18	ENSMUST00000234997	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037013	Ss18	ENSMUST00000040964	ENSMUSP00000047867	TRANSLATION	protein_coding	-	CCDS50225.1	1	344	0	0	0.5	106.3	0	-4,-2	-	-	6	MINOR
ENSMUSG00000103458	Gm42416	ENSMUST00000115661	ENSMUSP00000111325	TRANSLATION	protein_coding,RT	-	CCDS79616.1	2	919	49	1	0.5	421	0	0,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000058881	Zfp516	ENSMUST00000236468	ENSMUSP00000157810	TRANSLATION	protein_coding	start	-	-	194	4	1.664	0	27.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058881	Zfp516	ENSMUST00000235793	ENSMUSP00000158540	TRANSLATION	protein_coding	stop	-	-	93	8	1.6	0	85.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058881	Zfp516	ENSMUST00000171238	ENSMUSP00000126629	TRANSLATION	protein_coding	-	CCDS29380.1	5	1157	35	2.6	0.5	149.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058881	Zfp516	ENSMUST00000071233	ENSMUSP00000071216	TRANSLATION	protein_coding	-	CCDS29380.1	5	1157	35	2.6	0.5	149.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000058881	Zfp516	ENSMUST00000237340	ENSMUSP00000157867	TRANSLATION	protein_coding	stop	-	-	46	2	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000058881	Zfp516	ENSMUST00000235902	ENSMUSP00000158105	TRANSLATION	protein_coding	stop	-	-	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058881	Zfp516	ENSMUST00000236858	ENSMUSP00000157930	TRANSLATION	protein_coding	stop	-	-	111	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000054072	Iigp1	ENSMUST00000237185	ENSMUSP00000157568	TRANSLATION	protein_coding	-	CCDS29270.1	-	413	15	1	0.5	594.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054072	Iigp1	ENSMUST00000066912	ENSMUSP00000063390	TRANSLATION	protein_coding	-	CCDS29270.1	1	413	15	1	0.5	594.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000054072	Iigp1	ENSMUST00000237794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054072	Iigp1	ENSMUST00000235989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054072	Iigp1	ENSMUST00000032473	ENSMUSP00000032473	TRANSLATION	protein_coding	-	CCDS29270.1	3	413	15	1	0.5	594.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000044043	Pcdhb14	ENSMUST00000052387	ENSMUSP00000054111	TRANSLATION	protein_coding	-	CCDS29180.1	-	796	55	0.8	1.5	470.5	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000041915	Ammecr1l	ENSMUST00000234413	ENSMUSP00000156982	TRANSLATION	protein_coding	-	CCDS37753.1	-	310	0	2	14.8	169	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000041915	Ammecr1l	ENSMUST00000234191	ENSMUSP00000157050	TRANSLATION	protein_coding	-	-	-	300	0	2	0	160.7	0	-4,-6	-	-	11.502	MINOR
ENSMUSG00000041915	Ammecr1l	ENSMUST00000234500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041915	Ammecr1l	ENSMUST00000234441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041915	Ammecr1l	ENSMUST00000115808	ENSMUSP00000111475	TRANSLATION	protein_coding	-	CCDS37753.1	1	310	0	2	14.8	169	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024430	Cabyr	ENSMUST00000150758	ENSMUSP00000118330	TRANSLATION	nonsense_mediated_decay	-	-	1	453	0	0	0.5	37.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024430	Cabyr	ENSMUST00000191078	ENSMUSP00000140894	TRANSLATION	protein_coding	-	CCDS37739.1	1	453	0	0	0.5	37.5	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000024430	Cabyr	ENSMUST00000186263	ENSMUSP00000140870	TRANSLATION	protein_coding	-	CCDS37739.1	1	453	0	0	0.5	37.5	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000024430	Cabyr	ENSMUST00000235000	ENSMUSP00000157080	TRANSLATION	protein_coding	-	-	-	187	0	0	0	37.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024430	Cabyr	ENSMUST00000080415	ENSMUSP00000079277	TRANSLATION	nonsense_mediated_decay	-	-	1	453	0	0	0.5	37.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024430	Cabyr	ENSMUST00000121018	ENSMUSP00000113131	TRANSLATION	protein_coding	-	CCDS50223.1	1	381	0	0	0.5	37.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024430	Cabyr	ENSMUST00000115857	ENSMUSP00000111523	TRANSLATION	protein_coding	-	CCDS37739.1	1	453	0	0	0.5	37.5	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000024430	Cabyr	ENSMUST00000234735	ENSMUSP00000157280	TRANSLATION	protein_coding	-	CCDS50223.1	-	381	0	0	0.5	37.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024430	Cabyr	ENSMUST00000119108	ENSMUSP00000113760	TRANSLATION	protein_coding	-	CCDS50224.1	1	220	0	0	0.5	37.5	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024604	Rbm22	ENSMUST00000025506	ENSMUSP00000025506	TRANSLATION	protein_coding	-	CCDS29272.1	1	420	4	9.33	12.8	41.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024604	Rbm22	ENSMUST00000159203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024604	Rbm22	ENSMUST00000160020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024604	Rbm22	ENSMUST00000160353	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024604	Rbm22	ENSMUST00000161544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091539	Vmn1r238	ENSMUST00000165255	ENSMUSP00000129804	TRANSLATION	protein_coding	-	CCDS50208.1	-	306	0	0	1.5	110.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047910	Pcdhb16	ENSMUST00000051442	ENSMUSP00000056347	TRANSLATION	protein_coding	-	CCDS29182.1	-	802	50	0.8	0.5	455.2	0	2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000078963	Hsbp1l1	ENSMUST00000166219	ENSMUSP00000132852	TRANSLATION	protein_coding	-	CCDS50333.1	1	72	0	0	2.7	58.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000078963	Hsbp1l1	ENSMUST00000237192	ENSMUSP00000158095	TRANSLATION	protein_coding	-	CCDS50333.1	-	72	0	0	2.7	58.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024558	Mapk4	ENSMUST00000159162	ENSMUSP00000123922	TRANSLATION	protein_coding	-	-	5	233	16	2	1.2	208.4	0	-4,-5	-	-	11.438	MINOR
ENSMUSG00000024558	Mapk4	ENSMUST00000162863	ENSMUSP00000124408	TRANSLATION	nonsense_mediated_decay	-	-	1	193	16	1.198	0	149.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024558	Mapk4	ENSMUST00000160601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024558	Mapk4	ENSMUST00000091851	ENSMUSP00000089462	TRANSLATION	protein_coding	-	CCDS37856.1	1	583	16	4.33	5.1	241.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024498	Tcerg1	ENSMUST00000237646	ENSMUSP00000158174	TRANSLATION	nonsense_mediated_decay	start	-	-	61	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024498	Tcerg1	ENSMUST00000236446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024498	Tcerg1	ENSMUST00000236856	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024498	Tcerg1	ENSMUST00000237602	ENSMUSP00000158288	TRANSLATION	protein_coding	-	CCDS29214.1	-	1100	0	14.75	0.5	335.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024498	Tcerg1	ENSMUST00000237390	ENSMUSP00000157680	TRANSLATION	protein_coding	start/stop	-	-	283	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024498	Tcerg1	ENSMUST00000236088	ENSMUSP00000157836	TRANSLATION	protein_coding	stop	-	-	779	0	8.94	0	150.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024498	Tcerg1	ENSMUST00000236418	ENSMUSP00000157866	TRANSLATION	protein_coding	start/stop	-	-	193	0	3	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024498	Tcerg1	ENSMUST00000237901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024498	Tcerg1	ENSMUST00000025375	ENSMUSP00000025375	TRANSLATION	protein_coding	-	-	1	1079	0	14.75	0.5	335.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024498	Tcerg1	ENSMUST00000173642	ENSMUSP00000134458	TRANSLATION	nonsense_mediated_decay	-	-	1	1034	0	13.75	0	287	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024498	Tcerg1	ENSMUST00000237162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000117781	Gm17266	ENSMUST00000236689	ENSMUSP00000158022	TRANSLATION	protein_coding	-	-	-	690	0	0	0.5	428.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000061013	Mkx	ENSMUST00000079788	ENSMUSP00000078718	TRANSLATION	protein_coding	-	CCDS37728.1	1	354	0	1.7	8.8	53	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000061013	Mkx	ENSMUST00000176608	ENSMUSP00000157351	TRANSLATION	protein_coding	stop	-	3	101	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000061013	Mkx	ENSMUST00000176757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061013	Mkx	ENSMUST00000188926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000014503	Pkd2l2	ENSMUST00000166156	ENSMUSP00000127257	TRANSLATION	protein_coding	-	CCDS29127.1	1	621	0	9.125	3.9	428.1	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000014503	Pkd2l2	ENSMUST00000236131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014503	Pkd2l2	ENSMUST00000235732	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000014503	Pkd2l2	ENSMUST00000014647	ENSMUSP00000014647	TRANSLATION	protein_coding	-	CCDS29127.1	1	621	0	9.125	3.9	428.1	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044322	Dsc1	ENSMUST00000224557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044322	Dsc1	ENSMUST00000224432	ENSMUSP00000153639	TRANSLATION	protein_coding	-	-	-	886	45	10.96	0.5	357.1	1	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000044322	Dsc1	ENSMUST00000226115	ENSMUSP00000153126	TRANSLATION	protein_coding	stop	-	-	147	0	1.63	0	67.9	0	1,-2	-	-	-1	MINOR
ENSMUSG00000044322	Dsc1	ENSMUST00000038710	ENSMUSP00000042303	TRANSLATION	protein_coding	-	CCDS29078.1	1	832	45	10.96	0.5	329.5	1	1,-2	-	-	16.344	MINOR
ENSMUSG00000024383	Map3k2	ENSMUST00000234611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024383	Map3k2	ENSMUST00000096575	ENSMUSP00000094326	TRANSLATION	protein_coding	-	CCDS29117.1	1	619	18	8.3	8.8	269.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024383	Map3k2	ENSMUST00000234576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044201	Cdc25c	ENSMUST00000237620	ENSMUSP00000157977	TRANSLATION	nonsense_mediated_decay	-	-	-	183	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044201	Cdc25c	ENSMUST00000237034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044201	Cdc25c	ENSMUST00000237822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044201	Cdc25c	ENSMUST00000237204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044201	Cdc25c	ENSMUST00000060710	ENSMUSP00000055427	TRANSLATION	protein_coding	-	CCDS37759.1	1	447	0	5.55	0.5	38.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000044201	Cdc25c	ENSMUST00000236366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024359	Hspa9	ENSMUST00000237399	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024359	Hspa9	ENSMUST00000025217	ENSMUSP00000025217	TRANSLATION	protein_coding	-	CCDS29138.1	1	679	19	13.07	6.4	895.1	0	-2,2	-	-	20	PRINCIPAL:1
ENSMUSG00000024359	Hspa9	ENSMUST00000236908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024359	Hspa9	ENSMUST00000235244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024359	Hspa9	ENSMUST00000237289	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000223794	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000224317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000223984	ENSMUSP00000153008	TRANSLATION	protein_coding	-	-	-	467	4	0	16.1	0	0	-4,-6	-	-	8	ALTERNATIVE:1
ENSMUSG00000024603	Dctn4	ENSMUST00000224671	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000223590	ENSMUSP00000153421	TRANSLATION	protein_coding	-	-	-	48	2	0	0	0	0	-4,-6	-	-	2	MINOR
ENSMUSG00000024603	Dctn4	ENSMUST00000225005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000224778	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024603	Dctn4	ENSMUST00000025505	ENSMUSP00000025505	TRANSLATION	protein_coding	-	CCDS37832.1	1	460	4	0	14.8	0	0	-4,-6	-	-	7.656	PRINCIPAL:2
ENSMUSG00000037058	Paip2	ENSMUST00000236868	ENSMUSP00000157456	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000236414	ENSMUSP00000158248	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000235211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037058	Paip2	ENSMUST00000235210	ENSMUSP00000157936	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000236666	ENSMUSP00000158160	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000237730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037058	Paip2	ENSMUST00000235476	ENSMUSP00000158496	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000236020	ENSMUSP00000157742	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000238138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037058	Paip2	ENSMUST00000235400	ENSMUSP00000157519	TRANSLATION	protein_coding	-	CCDS29143.1	-	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000037058	Paip2	ENSMUST00000041314	ENSMUSP00000036021	TRANSLATION	protein_coding	-	CCDS29143.1	1	124	0	0	14.8	29.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000032905	Atg12	ENSMUST00000234830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032905	Atg12	ENSMUST00000035648	ENSMUSP00000038489	TRANSLATION	protein_coding	-	CCDS37811.1	1	141	0	2.25	2.7	139.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000032905	Atg12	ENSMUST00000234430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024472	Dcp2	ENSMUST00000202306	ENSMUSP00000144010	TRANSLATION	protein_coding	-	-	1	82	0	1.3	0	79.9	0	-4,-5	-	-	1.17	MINOR
ENSMUSG00000024472	Dcp2	ENSMUST00000025350	ENSMUSP00000025350	TRANSLATION	protein_coding	-	CCDS50275.1	1	422	3	4.78	6.3	160.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024271	Elp2	ENSMUST00000234351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024271	Elp2	ENSMUST00000234484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024271	Elp2	ENSMUST00000234903	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024271	Elp2	ENSMUST00000234164	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024271	Elp2	ENSMUST00000234847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024271	Elp2	ENSMUST00000234014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024271	Elp2	ENSMUST00000234266	ENSMUSP00000157109	TRANSLATION	protein_coding	-	CCDS29103.1	-	831	0	11.745	0.5	100.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024271	Elp2	ENSMUST00000025120	ENSMUSP00000025120	TRANSLATION	protein_coding	-	-	1	741	0	10.145	0	84.1	0	-4,-7	-	-	7.8	MINOR
ENSMUSG00000024293	Esco1	ENSMUST00000025142	ENSMUSP00000025142	TRANSLATION	protein_coding	-	CCDS37737.1	1	843	4	5.65	1.5	158.5	0	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000024293	Esco1	ENSMUST00000097670	ENSMUSP00000095274	TRANSLATION	protein_coding	-	-	1	344	4	5.65	0.5	158.5	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000024293	Esco1	ENSMUST00000127099	ENSMUSP00000157382	TRANSLATION	nonsense_mediated_decay	-	-	1	690	4	1.65	0	53.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024293	Esco1	ENSMUST00000234090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024293	Esco1	ENSMUST00000145320	ENSMUSP00000157069	TRANSLATION	protein_coding	-	-	1	217	2	4.75	0	104.9	0	-4,-5	-	-	8.984	MINOR
ENSMUSG00000024293	Esco1	ENSMUST00000115864	ENSMUSP00000111530	TRANSLATION	protein_coding	-	-	1	319	4	5.65	0	158.5	0	-4,-7	-	-	16	ALTERNATIVE:2
ENSMUSG00000024293	Esco1	ENSMUST00000234550	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024293	Esco1	ENSMUST00000234151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024293	Esco1	ENSMUST00000234347	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037815	Ctnna1	ENSMUST00000235449	ENSMUSP00000158398	TRANSLATION	protein_coding	stop	-	-	122	0	3.58	0	172.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037815	Ctnna1	ENSMUST00000237475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037815	Ctnna1	ENSMUST00000238145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037815	Ctnna1	ENSMUST00000237855	ENSMUSP00000157907	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037815	Ctnna1	ENSMUST00000236483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037815	Ctnna1	ENSMUST00000236571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037815	Ctnna1	ENSMUST00000042345	ENSMUSP00000049007	TRANSLATION	protein_coding	-	CCDS29139.1	1	906	0	18.08	17	1046.3	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000037815	Ctnna1	ENSMUST00000236037	ENSMUSP00000157978	TRANSLATION	protein_coding	stop	-	-	415	0	7.83	0	391.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037815	Ctnna1	ENSMUST00000235269	ENSMUSP00000158385	TRANSLATION	protein_coding	stop	-	-	62	0	1.83	0	77.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037815	Ctnna1	ENSMUST00000237154	ENSMUSP00000158091	TRANSLATION	protein_coding	stop	-	-	156	0	3	0	163.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037815	Ctnna1	ENSMUST00000236969	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041225	Arhgap12	ENSMUST00000182066	ENSMUSP00000138496	TRANSLATION	protein_coding	-	-	5	791	5	9.865	6.3	525.1	0	-4,-5	-	-	19.445	ALTERNATIVE:1
ENSMUSG00000041225	Arhgap12	ENSMUST00000182559	ENSMUSP00000138585	TRANSLATION	protein_coding	-	CCDS37723.1	1	838	5	9.865	7.5	525.1	0	-4,-5	-	-	20	PRINCIPAL:4
ENSMUSG00000041225	Arhgap12	ENSMUST00000182614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041225	Arhgap12	ENSMUST00000062584	ENSMUSP00000054209	TRANSLATION	protein_coding	-	-	5	796	5	9.865	4.1	525.1	0	-4,-5	-	-	18.431	MINOR
ENSMUSG00000041225	Arhgap12	ENSMUST00000182921	ENSMUSP00000138798	TRANSLATION	protein_coding	start/stop	-	3	146	2	1.5	0	107.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041225	Arhgap12	ENSMUST00000182038	ENSMUSP00000138150	TRANSLATION	protein_coding	stop	-	1	394	0	1.2	0	313.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041225	Arhgap12	ENSMUST00000182178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041225	Arhgap12	ENSMUST00000182343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041225	Arhgap12	ENSMUST00000077128	ENSMUSP00000076376	TRANSLATION	protein_coding	-	CCDS37722.1	1	813	5	9.865	7.5	525.1	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000041225	Arhgap12	ENSMUST00000182383	ENSMUSP00000138444	TRANSLATION	protein_coding	-	-	5	766	5	9.865	6.3	525.1	0	-4,-5	-	-	19.445	ALTERNATIVE:1
ENSMUSG00000041225	Arhgap12	ENSMUST00000182322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041225	Arhgap12	ENSMUST00000182572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041225	Arhgap12	ENSMUST00000181989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041225	Arhgap12	ENSMUST00000182213	ENSMUSP00000138464	TRANSLATION	protein_coding	-	-	5	843	5	9.865	4.1	525.1	0	-4,-5	-	-	18.431	MINOR
ENSMUSG00000041225	Arhgap12	ENSMUST00000182101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024232	Bambi	ENSMUST00000025075	ENSMUSP00000025075	TRANSLATION	protein_coding	-	CCDS29034.1	1	260	0	0	14.8	209	0	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000053441	Adamts19	ENSMUST00000052907	ENSMUSP00000050535	TRANSLATION	protein_coding	-	CCDS29266.1	1	1210	13	7.94	0.5	386.4	0	-3,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000053441	Adamts19	ENSMUST00000237964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053441	Adamts19	ENSMUST00000236901	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053441	Adamts19	ENSMUST00000237536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079608	Stard6	ENSMUST00000173951	ENSMUSP00000134211	TRANSLATION	protein_coding	stop	-	5	54	0	1.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079608	Stard6	ENSMUST00000174667	ENSMUSP00000133956	TRANSLATION	protein_coding	stop	-	3	98	0	2.75	0	37.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079608	Stard6	ENSMUST00000114959	ENSMUSP00000110609	TRANSLATION	protein_coding	-	CCDS37854.1	1	233	0	5.58	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079608	Stard6	ENSMUST00000174118	ENSMUSP00000134511	TRANSLATION	protein_coding	-	CCDS37854.1	1	233	0	5.58	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079608	Stard6	ENSMUST00000173612	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079608	Stard6	ENSMUST00000164223	ENSMUSP00000126055	TRANSLATION	protein_coding	-	CCDS37854.1	1	233	0	5.58	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079608	Stard6	ENSMUST00000168249	ENSMUSP00000130991	TRANSLATION	protein_coding	-	CCDS37854.1	1	233	0	5.58	0.5	93.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000103567	Pcdhga5	ENSMUST00000193414	ENSMUSP00000141893	TRANSLATION	protein_coding	-	CCDS79627.1	1	932	50	1	0.5	539.7	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038425	Poli	ENSMUST00000121674	ENSMUSP00000112563	TRANSLATION	protein_coding	-	CCDS29334.2	1	737	16	9.75	0.5	233.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038425	Poli	ENSMUST00000159389	ENSMUSP00000123964	TRANSLATION	protein_coding	-	CCDS79660.1	1	651	8	7.65	0.5	175.9	0	-4,-5	-	-	5.028	MINOR
ENSMUSG00000038425	Poli	ENSMUST00000235127	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038425	Poli	ENSMUST00000043286	ENSMUSP00000039869	TRANSLATION	protein_coding	-	CCDS50317.1	1	674	12	8.4	0.5	208	0	-4,-5	-	-	11.124	MINOR
ENSMUSG00000038425	Poli	ENSMUST00000161542	ENSMUSP00000124877	TRANSLATION	protein_coding	-	CCDS50317.1	1	674	12	8.4	0.5	208	0	-4,-5	-	-	11.124	MINOR
ENSMUSG00000038425	Poli	ENSMUST00000160713	ENSMUSP00000125467	TRANSLATION	nonsense_mediated_decay	-	-	1	135	10	3	0	94.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024539	Ptpn2	ENSMUST00000122412	ENSMUSP00000112675	TRANSLATION	protein_coding	-	CCDS50311.1	1	406	11	7.65	1.5	262.4	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024539	Ptpn2	ENSMUST00000025420	ENSMUSP00000025420	TRANSLATION	protein_coding	-	CCDS37851.1	1	382	11	7.65	1.5	262.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000024539	Ptpn2	ENSMUST00000128169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024539	Ptpn2	ENSMUST00000120934	ENSMUSP00000113182	TRANSLATION	protein_coding	-	-	5	363	11	7.15	1	262.4	0	-4,-5	-	-	16.998	ALTERNATIVE:2
ENSMUSG00000024517	Grp	ENSMUST00000025395	ENSMUSP00000025395	TRANSLATION	protein_coding	-	CCDS29310.1	1	146	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000024517	Grp	ENSMUST00000173530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024517	Grp	ENSMUST00000173985	ENSMUSP00000133437	TRANSLATION	protein_coding	-	CCDS29310.1	5	146	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000025427	Rnf165	ENSMUST00000182024	ENSMUSP00000138494	TRANSLATION	protein_coding	-	-	5	154	8	3	2.4	53.9	0	-4,-2	-	-	18.528	MINOR
ENSMUSG00000025427	Rnf165	ENSMUST00000182805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025427	Rnf165	ENSMUST00000182348	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025427	Rnf165	ENSMUST00000026494	ENSMUSP00000026494	TRANSLATION	protein_coding	-	CCDS50327.1	5	347	8	3	6.3	53.9	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000025427	Rnf165	ENSMUST00000182146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025427	Rnf165	ENSMUST00000182294	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025427	Rnf165	ENSMUST00000182153	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064036	Mro	ENSMUST00000179472	ENSMUSP00000136775	TRANSLATION	protein_coding	-	CCDS79663.1	5	246	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000064036	Mro	ENSMUST00000134847	ENSMUSP00000118500	TRANSLATION	protein_coding	stop	-	3	51	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064036	Mro	ENSMUST00000136473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064036	Mro	ENSMUST00000119239	ENSMUSP00000113392	TRANSLATION	protein_coding	-	CCDS50319.1	5	245	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000064036	Mro	ENSMUST00000120033	ENSMUSP00000113434	TRANSLATION	protein_coding	-	CCDS79663.1	1	246	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000064036	Mro	ENSMUST00000139821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024515	Smad4	ENSMUST00000147315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024515	Smad4	ENSMUST00000114939	ENSMUSP00000110589	TRANSLATION	protein_coding	-	CCDS29337.1	1	551	4	7.5	9.5	397.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024515	Smad4	ENSMUST00000131339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024515	Smad4	ENSMUST00000025393	ENSMUSP00000025393	TRANSLATION	protein_coding	-	CCDS29337.1	1	551	4	7.5	9.5	397.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024515	Smad4	ENSMUST00000129326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024515	Smad4	ENSMUST00000142672	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024352	Spata24	ENSMUST00000235760	ENSMUSP00000158003	TRANSLATION	nonsense_mediated_decay	start	-	-	111	0	0	0	108.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024352	Spata24	ENSMUST00000025209	ENSMUSP00000025209	TRANSLATION	protein_coding	-	CCDS29146.1	1	205	0	0	7.5	268.2	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000024352	Spata24	ENSMUST00000096573	ENSMUSP00000094324	TRANSLATION	protein_coding	-	CCDS29147.1	1	185	0	0	1.5	174.1	0	-4,-6	-	-	0.585	MINOR
ENSMUSG00000024352	Spata24	ENSMUST00000236971	ENSMUSP00000157683	TRANSLATION	protein_coding	start	-	-	164	0	0	0	104.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024352	Spata24	ENSMUST00000236539	ENSMUSP00000157452	TRANSLATION	protein_coding	start	-	-	153	0	0	0	197.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024352	Spata24	ENSMUST00000236574	ENSMUSP00000157388	TRANSLATION	protein_coding	start	-	-	180	0	0	0.5	161.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024352	Spata24	ENSMUST00000235803	ENSMUSP00000157985	TRANSLATION	nonsense_mediated_decay	-	-	-	55	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024516	Sec11c	ENSMUST00000025394	ENSMUSP00000025394	TRANSLATION	protein_coding	-	CCDS29309.1	1	192	0	0	6.3	0	1	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000024516	Sec11c	ENSMUST00000235765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024516	Sec11c	ENSMUST00000153193	ENSMUSP00000122547	TRANSLATION	protein_coding	-	-	3	206	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000024516	Sec11c	ENSMUST00000126651	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024516	Sec11c	ENSMUST00000155668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024516	Sec11c	ENSMUST00000139538	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024516	Sec11c	ENSMUST00000235959	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024516	Sec11c	ENSMUST00000125552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024516	Sec11c	ENSMUST00000235411	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024516	Sec11c	ENSMUST00000236847	ENSMUSP00000158224	TRANSLATION	protein_coding	-	-	-	142	0	0	0	0	1	-4,-7	-	-	0	MINOR
ENSMUSG00000024516	Sec11c	ENSMUST00000126432	ENSMUSP00000122624	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000056153	Socs6	ENSMUST00000070116	ENSMUSP00000064929	TRANSLATION	protein_coding	-	CCDS29389.1	1	533	0	0.8	0.5	89	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056153	Socs6	ENSMUST00000147313	ENSMUSP00000116148	TRANSLATION	protein_coding	stop	-	3	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056153	Socs6	ENSMUST00000136173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056153	Socs6	ENSMUST00000237549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056153	Socs6	ENSMUST00000236108	ENSMUSP00000157902	TRANSLATION	protein_coding	stop	-	-	65	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056153	Socs6	ENSMUST00000123826	ENSMUSP00000114993	TRANSLATION	protein_coding	-	CCDS29389.1	1	533	0	0.8	0.5	89	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000056153	Socs6	ENSMUST00000155169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056153	Socs6	ENSMUST00000145120	ENSMUSP00000122237	TRANSLATION	protein_coding	stop	-	2	180	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000056153	Socs6	ENSMUST00000125362	ENSMUSP00000118764	TRANSLATION	protein_coding	-	CCDS29389.1	1	533	0	0.8	0.5	89	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024313	Mep1b	ENSMUST00000235102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024313	Mep1b	ENSMUST00000082235	ENSMUSP00000080866	TRANSLATION	protein_coding	-	CCDS37747.1	1	704	12	9.23	1.5	385.3	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024313	Mep1b	ENSMUST00000234367	ENSMUSP00000156977	TRANSLATION	protein_coding	stop	-	-	128	1	2.75	0	35.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024354	Slc23a1	ENSMUST00000235744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024354	Slc23a1	ENSMUST00000236196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024354	Slc23a1	ENSMUST00000237305	ENSMUSP00000158090	TRANSLATION	nonsense_mediated_decay	-	-	-	53	7	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024354	Slc23a1	ENSMUST00000025212	ENSMUSP00000025212	TRANSLATION	protein_coding	-	CCDS29144.1	1	605	0	2.88	1.5	295.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045730	Adrb2	ENSMUST00000053640	ENSMUSP00000062256	TRANSLATION	protein_coding	-	CCDS29289.1	-	418	0	1	2.7	243.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000037416	Dmxl1	ENSMUST00000181042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037416	Dmxl1	ENSMUST00000224938	ENSMUSP00000153077	TRANSLATION	protein_coding	start/stop	-	-	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037416	Dmxl1	ENSMUST00000181907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037416	Dmxl1	ENSMUST00000180611	ENSMUSP00000137871	TRANSLATION	protein_coding	-	CCDS37816.2	1	3013	0	3.09	0.5	303.6	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000037416	Dmxl1	ENSMUST00000181828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037416	Dmxl1	ENSMUST00000041772	ENSMUSP00000045559	TRANSLATION	protein_coding	-	-	5	3025	0	3.09	0	303.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000052928	Ctif	ENSMUST00000165559	ENSMUSP00000129974	TRANSLATION	protein_coding	-	CCDS37861.1	5	623	0	2.12	0.5	97.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052928	Ctif	ENSMUST00000235147	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056214	Pard6g	ENSMUST00000070219	ENSMUSP00000069182	TRANSLATION	protein_coding	-	CCDS29363.1	1	382	0	2.25	1.5	95.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000033632	AW554918	ENSMUST00000165400	ENSMUSP00000128437	TRANSLATION	protein_coding	-	-	5	612	0	0	0.5	522.3	0	-4,-5	-	-	5.88	ALTERNATIVE:2
ENSMUSG00000033632	AW554918	ENSMUST00000097643	ENSMUSP00000095248	TRANSLATION	protein_coding	-	-	5	612	0	0	0.5	524.3	0	-4,-5	-	-	6	PRINCIPAL:5
ENSMUSG00000033632	AW554918	ENSMUST00000160530	ENSMUSP00000123930	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033632	AW554918	ENSMUST00000159605	ENSMUSP00000124241	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033632	AW554918	ENSMUST00000100131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033632	AW554918	ENSMUST00000036619	ENSMUSP00000046227	TRANSLATION	protein_coding	-	-	5	579	0	0	0.5	524.3	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033632	AW554918	ENSMUST00000161262	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033632	AW554918	ENSMUST00000162149	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025880	Smad7	ENSMUST00000172718	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025880	Smad7	ENSMUST00000026999	ENSMUSP00000026999	TRANSLATION	protein_coding	-	CCDS37860.1	1	426	4	2.46	6.3	271	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025880	Smad7	ENSMUST00000174411	ENSMUSP00000133696	TRANSLATION	protein_coding	-	-	5	227	0	2.14	0	167.6	0	-4,-5	-	-	5.22	MINOR
ENSMUSG00000025880	Smad7	ENSMUST00000174843	ENSMUSP00000133544	TRANSLATION	protein_coding	start/stop	-	3	264	4	1.22	0	136.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025880	Smad7	ENSMUST00000168918	ENSMUSP00000129322	TRANSLATION	protein_coding	-	CCDS37860.1	1	426	4	2.46	6.3	271	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000053846	Lipg	ENSMUST00000066532	ENSMUSP00000066536	TRANSLATION	protein_coding	-	CCDS29343.1	1	500	7	5.52	0.5	450.4	0	-1,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000053846	Lipg	ENSMUST00000235783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024240	Epc1	ENSMUST00000050542	ENSMUSP00000060599	TRANSLATION	protein_coding	-	CCDS70868.1	1	61	0	0.6	0.5	0	0	-4,-2	-	-	1.296	MINOR
ENSMUSG00000024240	Epc1	ENSMUST00000028100	ENSMUSP00000028100	TRANSLATION	protein_coding	-	CCDS29041.1	1	813	0	2.78	0.5	387.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024240	Epc1	ENSMUST00000124926	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024240	Epc1	ENSMUST00000115870	ENSMUSP00000111536	TRANSLATION	protein_coding	-	CCDS37726.1	1	763	0	2.18	0.5	345.1	0	-4,-5	-	-	8.136	MINOR
ENSMUSG00000024533	Spire1	ENSMUST00000224659	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024533	Spire1	ENSMUST00000082243	ENSMUSP00000080871	TRANSLATION	protein_coding	-	-	1	598	4	3.36	0	86.5	0	-4,-5	-	-	5.338	MINOR
ENSMUSG00000024533	Spire1	ENSMUST00000226000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024533	Spire1	ENSMUST00000224189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024533	Spire1	ENSMUST00000115050	ENSMUSP00000110702	TRANSLATION	protein_coding	-	-	1	743	4	5.69	0.5	262.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024533	Spire1	ENSMUST00000224799	ENSMUSP00000153492	TRANSLATION	protein_coding	-	CCDS37849.1	-	515	4	1.61	0.5	0	0	-4,-5	-	-	4	MINOR
ENSMUSG00000024533	Spire1	ENSMUST00000045105	ENSMUSP00000049336	TRANSLATION	protein_coding	-	CCDS29323.1	5	643	4	3.36	0.5	86.5	0	-4,-5	-	-	5.338	MINOR
ENSMUSG00000024533	Spire1	ENSMUST00000224122	ENSMUSP00000153692	TRANSLATION	protein_coding	start	-	-	344	4	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000032656	Marchf3	ENSMUST00000102912	ENSMUSP00000099976	TRANSLATION	protein_coding	-	CCDS29262.1	1	218	8	1	0.5	55.7	3	-4,-5	-	-	18	MINOR
ENSMUSG00000032656	Marchf3	ENSMUST00000153044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032656	Marchf3	ENSMUST00000035278	ENSMUSP00000047946	TRANSLATION	protein_coding	-	-	3	253	8	1	11.7	55.7	4	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000104252	Pcdha4	ENSMUST00000192295	ENSMUSP00000142103	TRANSLATION	protein_coding	-	-	1	640	48	1.96	0	404.3	0	0,-2	-	-	5.928	MINOR
ENSMUSG00000104252	Pcdha4	ENSMUST00000192512	ENSMUSP00000141408	TRANSLATION	protein_coding	-	CCDS37776.1	1	947	55	2.56	1.5	544.7	0	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000104252	Pcdha4	ENSMUST00000194235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024269	Tpgs2	ENSMUST00000148255	ENSMUSP00000122538	TRANSLATION	protein_coding	-	CCDS50240.1	1	241	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000024269	Tpgs2	ENSMUST00000115817	ENSMUSP00000111484	TRANSLATION	protein_coding	-	CCDS29105.2	1	296	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000024610	Cd74	ENSMUST00000237097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024610	Cd74	ENSMUST00000167610	ENSMUSP00000126688	TRANSLATION	protein_coding	-	CCDS37835.1	1	279	0	3.35	1.5	303	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024610	Cd74	ENSMUST00000097563	ENSMUSP00000095171	TRANSLATION	protein_coding	-	CCDS37835.1	1	279	0	3.35	1.5	303	1	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024610	Cd74	ENSMUST00000050487	ENSMUSP00000057836	TRANSLATION	protein_coding	-	CCDS50299.1	1	215	0	2.35	1.5	247.8	1	-4,-5	-	-	6.69	MINOR
ENSMUSG00000024610	Cd74	ENSMUST00000238179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024366	Gfra3	ENSMUST00000025224	ENSMUSP00000025224	TRANSLATION	protein_coding	-	CCDS29133.1	1	397	0	4.95	0.5	122.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024513	Mbd2	ENSMUST00000127260	ENSMUSP00000120508	TRANSLATION	nonsense_mediated_decay	start	-	3	72	0	0	0	79.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024513	Mbd2	ENSMUST00000133889	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024513	Mbd2	ENSMUST00000128555	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024513	Mbd2	ENSMUST00000114946	ENSMUSP00000110596	TRANSLATION	protein_coding	-	CCDS79661.1	1	249	0	1.4	0.5	81.5	0	-4,-5	-	-	3	MINOR
ENSMUSG00000024513	Mbd2	ENSMUST00000074058	ENSMUSP00000073701	TRANSLATION	protein_coding	-	CCDS29335.1	1	414	0	2.8	1.5	300.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000110576	Gm36368	ENSMUST00000212026	ENSMUSP00000148409	TRANSLATION	protein_coding	-	-	5	91	0	1	1	45.6	0	-1,-4	-	-	12	PRINCIPAL:5
ENSMUSG00000110576	Gm36368	ENSMUST00000236302	ENSMUSP00000158461	TRANSLATION	protein_coding	-	-	-	81	0	1	0	45.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000050996	Cetn1	ENSMUST00000062769	ENSMUSP00000057392	TRANSLATION	protein_coding	-	CCDS37731.1	1	172	20	1	9.5	100.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000050996	Cetn1	ENSMUST00000234003	ENSMUSP00000157153	TRANSLATION	protein_coding	-	CCDS37731.1	-	172	20	1	9.5	100.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000050996	Cetn1	ENSMUST00000234590	ENSMUSP00000157126	TRANSLATION	nonsense_mediated_decay	-	-	-	172	20	1	9.5	100.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041840	Haus1	ENSMUST00000048192	ENSMUSP00000035826	TRANSLATION	protein_coding	-	CCDS29357.1	1	278	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000041840	Haus1	ENSMUST00000236575	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041840	Haus1	ENSMUST00000236234	ENSMUSP00000158336	TRANSLATION	protein_coding	-	-	-	293	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000043458	Pcdhb12	ENSMUST00000055495	ENSMUSP00000050357	TRANSLATION	protein_coding	-	CCDS79621.1	-	789	54	1	0.5	459.1	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000035765	Dym	ENSMUST00000235692	ENSMUSP00000157969	TRANSLATION	protein_coding	-	-	-	344	0	0	0	153.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035765	Dym	ENSMUST00000235554	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035765	Dym	ENSMUST00000039608	ENSMUSP00000047054	TRANSLATION	protein_coding	-	CCDS29346.1	1	669	0	0	9.5	597.1	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000035765	Dym	ENSMUST00000236220	ENSMUSP00000157621	TRANSLATION	protein_coding	-	-	-	263	0	0	0	149.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035765	Dym	ENSMUST00000236840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035765	Dym	ENSMUST00000235545	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043424	Eif3j2	ENSMUST00000057110	ENSMUSP00000054421	TRANSLATION	protein_coding	-	CCDS57122.1	-	263	0	0.6	0.5	214	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000005871	Apc	ENSMUST00000066133	ENSMUSP00000064214	TRANSLATION	protein_coding	-	-	1	324	0	5.15	0	180.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000005871	Apc	ENSMUST00000115781	ENSMUSP00000111447	TRANSLATION	protein_coding	-	-	5	2808	0	12.6	0	2514.1	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000005871	Apc	ENSMUST00000170195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005871	Apc	ENSMUST00000163295	ENSMUSP00000129095	TRANSLATION	nonsense_mediated_decay	start	-	5	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000005871	Apc	ENSMUST00000167136	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005871	Apc	ENSMUST00000170023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005871	Apc	ENSMUST00000171187	ENSMUSP00000127131	TRANSLATION	protein_coding	stop	-	5	1133	0	10.85	0	907.1	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000005871	Apc	ENSMUST00000165590	ENSMUSP00000128327	TRANSLATION	nonsense_mediated_decay	start	-	5	51	0	1	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005871	Apc	ENSMUST00000079362	ENSMUSP00000078337	TRANSLATION	protein_coding	-	CCDS29125.1	1	2842	0	12.8	0.5	2514.1	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000053729	Spinkl	ENSMUST00000066328	ENSMUSP00000063376	TRANSLATION	protein_coding	-	CCDS50273.1	1	90	0	0	0.5	28.9	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000053729	Spinkl	ENSMUST00000237958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001700	Gramd3	ENSMUST00000237716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001700	Gramd3	ENSMUST00000070166	ENSMUSP00000068453	TRANSLATION	protein_coding	-	CCDS50290.1	1	432	0	2	2.7	64.8	1	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000001700	Gramd3	ENSMUST00000235794	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001700	Gramd3	ENSMUST00000237422	ENSMUSP00000157609	TRANSLATION	protein_coding	-	-	-	445	0	2	1.5	64.8	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000001700	Gramd3	ENSMUST00000237355	ENSMUSP00000157710	TRANSLATION	protein_coding	-	CCDS50290.1	-	432	0	2	2.7	64.8	1	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024619	Cdx1	ENSMUST00000025521	ENSMUSP00000025521	TRANSLATION	protein_coding	-	CCDS29279.1	1	268	0	1.6	2.9	170.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024527	Afg3l2	ENSMUST00000237178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024527	Afg3l2	ENSMUST00000236810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024527	Afg3l2	ENSMUST00000025408	ENSMUSP00000025408	TRANSLATION	protein_coding	-	CCDS37847.1	1	802	14	8.48	1.5	434.9	0	-4,0	-	-	18	PRINCIPAL:1
ENSMUSG00000024527	Afg3l2	ENSMUST00000235409	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071855	Ccdc112	ENSMUST00000238189	ENSMUSP00000158529	TRANSLATION	protein_coding	start	-	-	220	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071855	Ccdc112	ENSMUST00000072835	ENSMUSP00000072614	TRANSLATION	protein_coding	-	CCDS50281.1	5	525	0	0	0.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000071855	Ccdc112	ENSMUST00000237152	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071855	Ccdc112	ENSMUST00000235609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071855	Ccdc112	ENSMUST00000236934	ENSMUSP00000158298	TRANSLATION	protein_coding	start/stop	-	-	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033949	Trim36	ENSMUST00000237526	ENSMUSP00000157724	TRANSLATION	nonsense_mediated_decay	start	-	-	219	0	0	0	33.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033949	Trim36	ENSMUST00000167364	ENSMUSP00000129771	TRANSLATION	protein_coding	-	CCDS50279.1	5	717	8	2.06	6.3	101.7	0	-4,-5	-	-	20.445	ALTERNATIVE:1
ENSMUSG00000033949	Trim36	ENSMUST00000037011	ENSMUSP00000037978	TRANSLATION	protein_coding	-	CCDS29229.1	1	729	8	2.06	7.5	101.7	0	-4,-5	-	-	21	PRINCIPAL:3
ENSMUSG00000053644	Aldh7a1	ENSMUST00000170309	ENSMUSP00000127625	TRANSLATION	protein_coding	start/stop	-	3	161	0	3.6	0	55	0	-1,3	-	-	-1	MINOR
ENSMUSG00000053644	Aldh7a1	ENSMUST00000172902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053644	Aldh7a1	ENSMUST00000171844	ENSMUSP00000127652	TRANSLATION	protein_coding	start/stop	-	3	121	0	3	0	39.2	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000053644	Aldh7a1	ENSMUST00000066208	ENSMUSP00000065089	TRANSLATION	protein_coding	-	CCDS29258.2	1	539	27	14.66	2.7	432.6	0	-1,3	-	-	18.694	MINOR
ENSMUSG00000053644	Aldh7a1	ENSMUST00000168517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053644	Aldh7a1	ENSMUST00000171851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053644	Aldh7a1	ENSMUST00000172734	ENSMUSP00000134192	TRANSLATION	protein_coding	-	-	5	475	27	12.91	1.2	352.6	0	-1,3	-	-	9.784	MINOR
ENSMUSG00000053644	Aldh7a1	ENSMUST00000174518	ENSMUSP00000133372	TRANSLATION	protein_coding	-	CCDS50291.1	1	511	27	14.66	5.9	432.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000053644	Aldh7a1	ENSMUST00000174704	ENSMUSP00000133970	TRANSLATION	nonsense_mediated_decay	start	-	5	321	20	7.55	0	184.3	0	-3,1	-	-	-1	MINOR
ENSMUSG00000041238	Rbbp8	ENSMUST00000234499	ENSMUSP00000157079	TRANSLATION	protein_coding	stop	-	-	118	0	1.25	0	151.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041238	Rbbp8	ENSMUST00000234766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041238	Rbbp8	ENSMUST00000235039	ENSMUSP00000157244	TRANSLATION	nonsense_mediated_decay	-	-	-	247	0	1.25	0	110.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041238	Rbbp8	ENSMUST00000234744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041238	Rbbp8	ENSMUST00000234984	ENSMUSP00000157008	TRANSLATION	nonsense_mediated_decay	-	-	-	612	0	1.25	0	174.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041238	Rbbp8	ENSMUST00000234161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041238	Rbbp8	ENSMUST00000047322	ENSMUSP00000046255	TRANSLATION	protein_coding	-	CCDS37738.1	1	893	0	2.08	1.5	174.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041238	Rbbp8	ENSMUST00000234616	ENSMUSP00000157098	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041238	Rbbp8	ENSMUST00000234074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041238	Rbbp8	ENSMUST00000234184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041238	Rbbp8	ENSMUST00000115861	ENSMUSP00000111527	TRANSLATION	protein_coding	-	CCDS37738.1	1	893	0	2.08	1.5	174.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054745	Gm9955	ENSMUST00000067987	ENSMUSP00000070898	TRANSLATION	protein_coding	start	-	-	102	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000109901	Chmp1b	ENSMUST00000210564	ENSMUSP00000147285	TRANSLATION	protein_coding	-	CCDS84391.1	-	199	0	0.6	17.5	59.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000090000	Ier3ip1	ENSMUST00000152369	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090000	Ier3ip1	ENSMUST00000026487	ENSMUSP00000026487	TRANSLATION	protein_coding	-	CCDS37862.1	1	82	0	0	18.5	106.7	0	1,-3	-	-	10	PRINCIPAL:1
ENSMUSG00000090000	Ier3ip1	ENSMUST00000128679	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090000	Ier3ip1	ENSMUST00000136800	ENSMUSP00000157745	TRANSLATION	protein_coding	-	-	3	93	0	0	0	40.6	0	1,-3	-	-	2.034	MINOR
ENSMUSG00000057719	Sh3rf2	ENSMUST00000074679	ENSMUSP00000074247	TRANSLATION	protein_coding	-	CCDS29210.1	1	703	8	2.48	0.5	122.1	0	-4,-7	-	-	14.148	MINOR
ENSMUSG00000057719	Sh3rf2	ENSMUST00000128066	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057719	Sh3rf2	ENSMUST00000237344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057719	Sh3rf2	ENSMUST00000236947	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057719	Sh3rf2	ENSMUST00000132681	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057719	Sh3rf2	ENSMUST00000072008	ENSMUSP00000071896	TRANSLATION	protein_coding	-	CCDS50265.1	1	735	8	3.48	0.5	153	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000038773	Kdm3b	ENSMUST00000225195	ENSMUSP00000153446	TRANSLATION	nonsense_mediated_decay	-	-	-	1333	6	3.8	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000038773	Kdm3b	ENSMUST00000224065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038773	Kdm3b	ENSMUST00000223567	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038773	Kdm3b	ENSMUST00000225260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038773	Kdm3b	ENSMUST00000224715	ENSMUSP00000153295	TRANSLATION	protein_coding	-	-	-	481	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000038773	Kdm3b	ENSMUST00000043775	ENSMUSP00000037628	TRANSLATION	protein_coding	-	CCDS37761.1	1	1762	9	9.05	1.5	60.4	0	-3,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038773	Kdm3b	ENSMUST00000225047	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002475	Abhd3	ENSMUST00000002549	ENSMUSP00000002549	TRANSLATION	protein_coding	-	-	1	360	6	0	0	35.3	2	-4,-7	-	-	8.106	MINOR
ENSMUSG00000002475	Abhd3	ENSMUST00000117726	ENSMUSP00000112768	TRANSLATION	protein_coding	-	-	1	407	7	0	6.3	71.4	2	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000002475	Abhd3	ENSMUST00000144150	ENSMUSP00000116037	TRANSLATION	protein_coding	start/stop	-	5	157	3	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000002475	Abhd3	ENSMUST00000117828	ENSMUSP00000113137	TRANSLATION	protein_coding	-	CCDS29057.1	1	411	7	0	6.3	35.3	2	-4,-7	-	-	10.964	MINOR
ENSMUSG00000002475	Abhd3	ENSMUST00000234419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038903	Ccdc68	ENSMUST00000080050	ENSMUSP00000078959	TRANSLATION	protein_coding	-	-	5	242	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000038903	Ccdc68	ENSMUST00000135428	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038903	Ccdc68	ENSMUST00000151773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038903	Ccdc68	ENSMUST00000043929	ENSMUSP00000046197	TRANSLATION	protein_coding	-	CCDS29330.1	1	333	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000117732	Gm50364	ENSMUST00000142456	ENSMUSP00000118504	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	152	0	0	0	74.1	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000006850	Tmco6	ENSMUST00000237727	ENSMUSP00000157431	TRANSLATION	nonsense_mediated_decay	-	-	-	128	0	1.7	0	26.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000006850	Tmco6	ENSMUST00000237079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006850	Tmco6	ENSMUST00000237255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006850	Tmco6	ENSMUST00000007046	ENSMUSP00000007046	TRANSLATION	protein_coding	-	CCDS37772.1	1	494	0	4.975	5.1	26.8	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000006850	Tmco6	ENSMUST00000237870	ENSMUSP00000158109	TRANSLATION	protein_coding	-	-	-	74	0	1.28	0	26.8	0	-4,0	-	-	6	MINOR
ENSMUSG00000006850	Tmco6	ENSMUST00000237559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024440	Pcdh12	ENSMUST00000193123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024440	Pcdh12	ENSMUST00000025311	ENSMUSP00000025311	TRANSLATION	protein_coding	-	CCDS29199.1	1	1180	50	0.6	0.5	259.7	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024440	Pcdh12	ENSMUST00000195747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024440	Pcdh12	ENSMUST00000194012	ENSMUSP00000141907	TRANSLATION	protein_coding	-	-	1	121	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000103092	Pcdha5	ENSMUST00000192168	ENSMUSP00000142293	TRANSLATION	protein_coding	-	CCDS79617.1	1	934	52	1	1.5	539.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000049173	Myoz3	ENSMUST00000056533	ENSMUSP00000063108	TRANSLATION	protein_coding	-	CCDS29273.1	1	245	0	0	1.5	115.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000102697	Pcdhac2	ENSMUST00000047479	ENSMUSP00000039888	TRANSLATION	protein_coding	-	CCDS29168.1	1	1006	46	0.8	6.3	645.2	0	-1,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000051599	Pcdhb2	ENSMUST00000056522	ENSMUSP00000057921	TRANSLATION	protein_coding	-	CCDS29170.1	-	799	54	3.1	1.5	458	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000051599	Pcdhb2	ENSMUST00000193137	ENSMUSP00000141439	TRANSLATION	protein_coding	stop	-	2	125	15	1.3	0	41.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000026322	Htr4	ENSMUST00000237114	ENSMUSP00000157982	TRANSLATION	protein_coding	-	-	-	377	0	3.306	0.5	224.6	9	-4,-6	-	-	12	MINOR
ENSMUSG00000026322	Htr4	ENSMUST00000027560	ENSMUSP00000027560	TRANSLATION	protein_coding	-	CCDS29291.1	1	388	0	3.306	5.1	224.6	9	-4,-6	-	-	14.016	PRINCIPAL:2
ENSMUSG00000026322	Htr4	ENSMUST00000238081	ENSMUSP00000157967	TRANSLATION	protein_coding	-	-	-	387	0	3.306	7.1	224.6	9	-4,-6	-	-	15	ALTERNATIVE:1
ENSMUSG00000026322	Htr4	ENSMUST00000236691	ENSMUSP00000157470	TRANSLATION	protein_coding	-	-	-	363	0	3.306	5.2	224.6	9	-4,-6	-	-	14.067	ALTERNATIVE:1
ENSMUSG00000104346	Pcdhga3	ENSMUST00000073447	ENSMUSP00000073150	TRANSLATION	protein_coding	-	CCDS37781.1	1	928	42	1	0.5	510.9	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051242	Pcdhb9	ENSMUST00000057228	ENSMUSP00000058801	TRANSLATION	protein_coding	-	CCDS37780.1	-	828	54	0.8	0.5	443.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024277	Mapre2	ENSMUST00000165387	ENSMUSP00000131142	TRANSLATION	nonsense_mediated_decay	-	-	5	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024277	Mapre2	ENSMUST00000132286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024277	Mapre2	ENSMUST00000025127	ENSMUSP00000025127	TRANSLATION	protein_coding	-	CCDS29095.1	1	326	3	5.2	9.6	104.8	0	-4,-5	-	-	17.481	PRINCIPAL:3
ENSMUSG00000024277	Mapre2	ENSMUST00000141853	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024277	Mapre2	ENSMUST00000149943	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024277	Mapre2	ENSMUST00000115830	ENSMUSP00000111496	TRANSLATION	protein_coding	-	CCDS50237.1	1	317	3	5.2	0.5	104.8	0	-4,-7	-	-	15	MINOR
ENSMUSG00000024277	Mapre2	ENSMUST00000170802	ENSMUSP00000128040	TRANSLATION	protein_coding	-	CCDS50238.1	5	284	3	5.2	11.4	104.8	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000024277	Mapre2	ENSMUST00000155708	ENSMUSP00000118807	TRANSLATION	protein_coding	stop	-	5	260	3	4.9	0	104.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024277	Mapre2	ENSMUST00000118826	ENSMUSP00000114113	TRANSLATION	protein_coding	-	-	1	171	3	3.5	0	48.4	0	-4,-5	-	-	8.214	MINOR
ENSMUSG00000024347	Psd2	ENSMUST00000175734	ENSMUSP00000135795	TRANSLATION	protein_coding	-	-	1	771	4	5.9	0.5	244.6	0	-4,-5	-	-	15.706	ALTERNATIVE:2
ENSMUSG00000024347	Psd2	ENSMUST00000176873	ENSMUSP00000135616	TRANSLATION	protein_coding	-	-	1	771	4	5.9	0.5	244.6	0	-4,-5	-	-	15.706	ALTERNATIVE:2
ENSMUSG00000024347	Psd2	ENSMUST00000115716	ENSMUSP00000111381	TRANSLATION	protein_coding	-	CCDS37767.1	1	770	4	5.8	0.5	249.5	0	-4,-5	-	-	15.802	PRINCIPAL:3
ENSMUSG00000024347	Psd2	ENSMUST00000177432	ENSMUSP00000135431	TRANSLATION	protein_coding	-	CCDS79612.1	1	767	4	5.8	0.5	235.3	0	-4,-5	-	-	14.95	ALTERNATIVE:2
ENSMUSG00000024347	Psd2	ENSMUST00000176472	ENSMUSP00000135285	TRANSLATION	nonsense_mediated_decay	-	-	1	554	2	4.58	0	161.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024347	Psd2	ENSMUST00000175720	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024349	Sting1	ENSMUST00000236926	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024349	Sting1	ENSMUST00000235218	ENSMUSP00000158511	TRANSLATION	protein_coding	start/stop	-	-	111	0	3	0	81	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024349	Sting1	ENSMUST00000235495	ENSMUSP00000157789	TRANSLATION	protein_coding	-	-	-	337	0	6.08	0.5	328.1	1	-4,-7	-	-	7.488	MINOR
ENSMUSG00000024349	Sting1	ENSMUST00000237919	ENSMUSP00000157408	TRANSLATION	protein_coding	-	CCDS50253.1	-	378	0	6.08	1.5	403.3	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024349	Sting1	ENSMUST00000235496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024349	Sting1	ENSMUST00000235173	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024349	Sting1	ENSMUST00000237853	ENSMUSP00000158306	TRANSLATION	nonsense_mediated_decay	-	-	-	204	0	1	0	150.4	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000024349	Sting1	ENSMUST00000237405	ENSMUSP00000157516	TRANSLATION	protein_coding	stop	-	-	45	0	0	0	0	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000024349	Sting1	ENSMUST00000115728	ENSMUSP00000111393	TRANSLATION	protein_coding	-	CCDS50253.1	1	378	0	6.08	1.5	403.3	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024349	Sting1	ENSMUST00000235302	ENSMUSP00000157565	TRANSLATION	protein_coding	stop	-	-	125	0	0	0	63.8	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000103585	Pcdhgb4	ENSMUST00000195363	ENSMUSP00000142227	TRANSLATION	protein_coding	-	CCDS79630.1	1	912	51	1	0.5	507.6	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000103585	Pcdhgb4	ENSMUST00000195069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000103144	Pcdhga1	ENSMUST00000194190	ENSMUSP00000142062	TRANSLATION	protein_coding	-	CCDS79622.1	1	931	51	1	0.5	500	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000103144	Pcdhga1	ENSMUST00000194888	ENSMUSP00000141367	TRANSLATION	protein_coding	-	-	-	810	51	1	1.2	409.2	1	3,-2	-	-	12.552	MINOR
ENSMUSG00000046191	Pcdhb20	ENSMUST00000052179	ENSMUSP00000137038	TRANSLATION	protein_coding	-	CCDS57120.1	-	799	50	0.6	1.5	452	0	2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000103472	Pcdhga7	ENSMUST00000193476	ENSMUSP00000142126	TRANSLATION	protein_coding	-	-	-	813	56	1	0	457	1	3,-2	-	-	12.552	MINOR
ENSMUSG00000103472	Pcdhga7	ENSMUST00000192511	ENSMUSP00000141704	TRANSLATION	protein_coding	-	CCDS79629.1	1	935	56	1	0.5	547.8	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024258	Polr2d	ENSMUST00000025106	ENSMUSP00000025106	TRANSLATION	protein_coding	-	CCDS29111.1	1	142	0	3.5	14.8	88.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024258	Polr2d	ENSMUST00000234146	ENSMUSP00000157052	TRANSLATION	protein_coding	-	-	-	110	0	2.5	0.5	24.8	0	-4,-5	-	-	5.682	MINOR
ENSMUSG00000033022	Cdo1	ENSMUST00000234819	ENSMUSP00000157285	TRANSLATION	protein_coding	-	-	-	174	6	5.16	0	189.9	0	-4,-5	-	-	10.806	MINOR
ENSMUSG00000033022	Cdo1	ENSMUST00000035804	ENSMUSP00000046517	TRANSLATION	protein_coding	-	CCDS29234.1	1	200	8	5.91	11	259.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000033022	Cdo1	ENSMUST00000234222	ENSMUSP00000157344	TRANSLATION	nonsense_mediated_decay	-	-	-	96	2	2.53	0	104.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033022	Cdo1	ENSMUST00000234064	ENSMUSP00000157361	TRANSLATION	nonsense_mediated_decay	-	-	-	149	5	4.25	0	188.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033022	Cdo1	ENSMUST00000234179	ENSMUSP00000157139	TRANSLATION	protein_coding	start/stop	-	-	143	8	3.9	0	213.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051678	Pcdhb6	ENSMUST00000061717	ENSMUSP00000058592	TRANSLATION	protein_coding	-	CCDS29174.1	-	772	55	1	1.5	453.7	1	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000051678	Pcdhb6	ENSMUST00000194655	ENSMUSP00000141773	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	58.4	1	1,-3	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000235372	ENSMUSP00000158047	TRANSLATION	protein_coding	-	-	-	225	0	5.83	1.2	59.2	0	-4,-5	-	-	4.494	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000154563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024581	Napg	ENSMUST00000236087	ENSMUSP00000158195	TRANSLATION	nonsense_mediated_decay	-	-	-	87	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000236925	ENSMUSP00000157905	TRANSLATION	protein_coding	-	-	-	230	0	5.83	2.2	59.9	0	-4,-5	-	-	4.894	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000237483	ENSMUSP00000158445	TRANSLATION	protein_coding	stop	-	-	38	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000155440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000133593	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000235974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000137849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000236193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000126870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000025474	ENSMUSP00000025474	TRANSLATION	protein_coding	-	CCDS29295.1	1	312	0	8.49	12.3	94.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024581	Napg	ENSMUST00000237864	ENSMUSP00000158265	TRANSLATION	nonsense_mediated_decay	-	-	-	87	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000237157	ENSMUSP00000157937	TRANSLATION	nonsense_mediated_decay	-	-	-	48	0	1.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000150267	ENSMUSP00000122681	TRANSLATION	protein_coding	stop	-	5	353	0	8.16	0	72.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024581	Napg	ENSMUST00000236914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024581	Napg	ENSMUST00000124837	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073555	Gm4951	ENSMUST00000031549	ENSMUSP00000031549	TRANSLATION	protein_coding	-	CCDS29268.1	1	406	14	1	0.5	515.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000038071	Npy6r	ENSMUST00000042747	ENSMUSP00000040797	TRANSLATION	protein_coding	-	CCDS29227.1	1	371	0	0.48	1.7	170.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000038059	Smim3	ENSMUST00000237270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038059	Smim3	ENSMUST00000042710	ENSMUSP00000039285	TRANSLATION	protein_coding	-	CCDS37831.1	1	60	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000008301	Phax	ENSMUST00000008445	ENSMUSP00000008445	TRANSLATION	protein_coding	-	CCDS29259.1	1	385	0	2.15	1.5	115.4	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000008301	Phax	ENSMUST00000130163	ENSMUSP00000122948	TRANSLATION	protein_coding	-	CCDS50292.1	1	363	0	2.15	0.5	115.4	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000008301	Phax	ENSMUST00000132628	ENSMUSP00000119047	TRANSLATION	protein_coding	start/stop	-	5	251	0	1	0	52.7	0	-4,0	-	-	-1	MINOR
ENSMUSG00000057455	Rit2	ENSMUST00000082070	ENSMUSP00000080724	TRANSLATION	nonsense_mediated_decay	-	-	1	77	12	1.62	0	33	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057455	Rit2	ENSMUST00000139924	ENSMUSP00000122938	TRANSLATION	protein_coding	-	-	1	97	13	2.25	0	59.7	0	-4,-5	-	-	2.232	MINOR
ENSMUSG00000057455	Rit2	ENSMUST00000153196	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057455	Rit2	ENSMUST00000153060	ENSMUSP00000114323	TRANSLATION	protein_coding	-	CCDS29108.1	1	217	20	4.8	6.4	174.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000068606	Gm4841	ENSMUST00000090260	ENSMUSP00000087727	TRANSLATION	protein_coding	-	CCDS50296.1	2	417	13	1	0.5	422.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032900	Tex43	ENSMUST00000235602	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032900	Tex43	ENSMUST00000147775	ENSMUSP00000115084	TRANSLATION	protein_coding	start	-	1	84	0	0	0	78.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032900	Tex43	ENSMUST00000035640	ENSMUSP00000038152	TRANSLATION	protein_coding	-	CCDS29260.1	1	141	0	0	0.5	251	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000032900	Tex43	ENSMUST00000127591	ENSMUSP00000117284	TRANSLATION	protein_coding	start	-	1	75	0	0	0	91.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032900	Tex43	ENSMUST00000153248	ENSMUSP00000116691	TRANSLATION	nonsense_mediated_decay	start	-	3	80	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038299	Wdr36	ENSMUST00000234798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038299	Wdr36	ENSMUST00000166214	ENSMUSP00000132189	TRANSLATION	protein_coding	-	CCDS50245.1	1	883	0	14.35	0.5	259.4	0	-4,-5	-	-	10.056	MINOR
ENSMUSG00000038299	Wdr36	ENSMUST00000234158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038299	Wdr36	ENSMUST00000234434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038299	Wdr36	ENSMUST00000053663	ENSMUSP00000052465	TRANSLATION	protein_coding	-	CCDS50246.1	1	899	0	14.5	1.5	286.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024451	Arap3	ENSMUST00000237677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024451	Arap3	ENSMUST00000237272	ENSMUSP00000157868	TRANSLATION	protein_coding	-	-	-	1460	4	8.95	0.5	362.2	0	-4,-5	-	-	11.512	MINOR
ENSMUSG00000024451	Arap3	ENSMUST00000236534	ENSMUSP00000158060	TRANSLATION	protein_coding	start/stop	-	-	154	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024451	Arap3	ENSMUST00000236588	ENSMUSP00000157916	TRANSLATION	protein_coding	stop	-	-	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024451	Arap3	ENSMUST00000042944	ENSMUSP00000035662	TRANSLATION	protein_coding	-	CCDS29196.1	1	1538	4	9.95	0.5	403.7	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024451	Arap3	ENSMUST00000237188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024451	Arap3	ENSMUST00000236772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024451	Arap3	ENSMUST00000236134	ENSMUSP00000157951	TRANSLATION	protein_coding	stop	-	-	47	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024451	Arap3	ENSMUST00000235391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006740	Kif5b	ENSMUST00000164426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006740	Kif5b	ENSMUST00000168031	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006740	Kif5b	ENSMUST00000166249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006740	Kif5b	ENSMUST00000163210	ENSMUSP00000130750	TRANSLATION	protein_coding	stop	-	5	619	11	9.75	0	376.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006740	Kif5b	ENSMUST00000170959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006740	Kif5b	ENSMUST00000234166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006740	Kif5b	ENSMUST00000025083	ENSMUSP00000025083	TRANSLATION	protein_coding	-	CCDS37724.1	1	963	11	9.75	12.8	376.1	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000036103	Colec12	ENSMUST00000234149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036103	Colec12	ENSMUST00000234965	ENSMUSP00000157132	TRANSLATION	protein_coding	-	CCDS37732.1	-	742	15	3	7.6	152.9	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000036103	Colec12	ENSMUST00000234026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036103	Colec12	ENSMUST00000040069	ENSMUSP00000043220	TRANSLATION	nonsense_mediated_decay	-	-	1	461	0	0	0	0	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000212155	ENSMUSP00000148818	TRANSLATION	protein_coding	-	-	1	482	0	0	0.5	131.7	0	-3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000237800	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000212982	ENSMUSP00000148769	TRANSLATION	protein_coding	-	-	1	401	0	0	0.5	131.7	0	-3,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000211817	ENSMUSP00000148747	TRANSLATION	protein_coding	-	-	1	258	0	0	0	48	0	-3,-1	-	-	0.978	MINOR
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000213066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000212683	ENSMUSP00000148553	TRANSLATION	nonsense_mediated_decay	-	-	1	377	0	0	0	81.5	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000212074	ENSMUSP00000148343	TRANSLATION	protein_coding	-	-	1	357	0	0	0	93.6	0	-3,-1	-	-	3.714	MINOR
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000212539	ENSMUSP00000148552	TRANSLATION	nonsense_mediated_decay	-	-	1	293	0	0	0	81.5	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000044906	4930503L19Rik	ENSMUST00000067556	ENSMUSP00000065118	TRANSLATION	protein_coding	-	CCDS29333.1	1	526	0	0	0.5	131.7	0	-3,-1	-	-	6	PRINCIPAL:2
ENSMUSG00000024480	Ap3s1	ENSMUST00000224622	ENSMUSP00000153388	TRANSLATION	protein_coding	-	-	-	162	0	3.632	10.3	182.7	0	-4,-7	-	-	13.816	MINOR
ENSMUSG00000024480	Ap3s1	ENSMUST00000226108	ENSMUSP00000153510	TRANSLATION	nonsense_mediated_decay	-	-	-	162	0	3.632	10.3	182.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024480	Ap3s1	ENSMUST00000225520	ENSMUSP00000153557	TRANSLATION	protein_coding	-	-	-	162	0	3.632	10.3	182.7	0	-4,-7	-	-	13.816	MINOR
ENSMUSG00000024480	Ap3s1	ENSMUST00000225415	ENSMUSP00000153290	TRANSLATION	nonsense_mediated_decay	-	-	-	54	0	1.55	0	54.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024480	Ap3s1	ENSMUST00000025357	ENSMUSP00000025357	TRANSLATION	protein_coding	-	CCDS29236.1	1	193	0	3.5	21.5	182.7	0	-4,-7	-	-	15.736	PRINCIPAL:1
ENSMUSG00000024480	Ap3s1	ENSMUST00000234998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052102	Gnpda1	ENSMUST00000129062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052102	Gnpda1	ENSMUST00000139885	ENSMUSP00000115359	TRANSLATION	protein_coding	stop	-	3	124	6	3	0	31.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052102	Gnpda1	ENSMUST00000237487	ENSMUSP00000157847	TRANSLATION	protein_coding	-	-	-	169	6	4.5	0	34.6	0	-4,-5	-	-	3.096	MINOR
ENSMUSG00000052102	Gnpda1	ENSMUST00000235590	ENSMUSP00000158388	TRANSLATION	protein_coding	-	-	-	177	6	3.864	0	34.6	0	-4,-5	-	-	3.096	MINOR
ENSMUSG00000052102	Gnpda1	ENSMUST00000153291	ENSMUSP00000157900	TRANSLATION	nonsense_mediated_decay	start	-	3	50	1	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052102	Gnpda1	ENSMUST00000237313	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052102	Gnpda1	ENSMUST00000063814	ENSMUSP00000069081	TRANSLATION	protein_coding	-	CCDS29201.1	1	289	16	8.08	12.8	67	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000044646	Zbtb7c	ENSMUST00000167921	ENSMUSP00000126808	TRANSLATION	protein_coding	-	CCDS29349.1	1	619	15	0.8	7.6	152	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000044646	Zbtb7c	ENSMUST00000236462	ENSMUSP00000157716	TRANSLATION	nonsense_mediated_decay	-	-	-	619	15	0.8	7.6	152	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044646	Zbtb7c	ENSMUST00000058997	ENSMUSP00000057856	TRANSLATION	protein_coding	-	CCDS29349.1	1	619	15	0.8	7.6	152	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000110628	Gm37797	ENSMUST00000212114	ENSMUSP00000148313	TRANSLATION	protein_coding	-	-	5	261	0	0	0	0	0	3,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000073574	Grxcr2	ENSMUST00000097591	ENSMUSP00000095198	TRANSLATION	protein_coding	-	CCDS29209.1	1	254	8	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024598	Fbn2	ENSMUST00000237293	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024598	Fbn2	ENSMUST00000235281	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024598	Fbn2	ENSMUST00000235417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024598	Fbn2	ENSMUST00000236932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024598	Fbn2	ENSMUST00000235779	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024598	Fbn2	ENSMUST00000025497	ENSMUSP00000025497	TRANSLATION	protein_coding	-	CCDS37827.1	5	2907	63	31.87	1.5	1796.9	0	2,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000060201	Spink7	ENSMUST00000235321	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060201	Spink7	ENSMUST00000076194	ENSMUSP00000075551	TRANSLATION	protein_coding	-	CCDS50304.1	5	85	0	1.566	1.5	46.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000036501	Fam13b	ENSMUST00000235529	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036501	Fam13b	ENSMUST00000238068	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036501	Fam13b	ENSMUST00000235364	ENSMUSP00000158564	TRANSLATION	nonsense_mediated_decay	start	-	-	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036501	Fam13b	ENSMUST00000237051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036501	Fam13b	ENSMUST00000236786	ENSMUSP00000157483	TRANSLATION	nonsense_mediated_decay	-	-	-	289	0	3	0	125.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036501	Fam13b	ENSMUST00000238047	ENSMUSP00000157749	TRANSLATION	protein_coding	start/stop	-	-	306	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036501	Fam13b	ENSMUST00000040506	ENSMUSP00000038199	TRANSLATION	protein_coding	-	CCDS29128.1	1	851	0	3	2.7	125.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000036501	Fam13b	ENSMUST00000236598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036501	Fam13b	ENSMUST00000238059	ENSMUSP00000158573	TRANSLATION	nonsense_mediated_decay	start	-	-	137	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036501	Fam13b	ENSMUST00000237676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036501	Fam13b	ENSMUST00000237302	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036501	Fam13b	ENSMUST00000237576	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036501	Fam13b	ENSMUST00000235499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036299	BC031181	ENSMUST00000040284	ENSMUSP00000040450	TRANSLATION	protein_coding	-	CCDS37859.1	1	72	0	0	3.9	50.5	0	-2,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000036299	BC031181	ENSMUST00000236421	ENSMUSP00000157657	TRANSLATION	protein_coding	-	CCDS37859.1	-	72	0	0	3.9	50.5	0	-2,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000036299	BC031181	ENSMUST00000235420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036299	BC031181	ENSMUST00000237263	ENSMUSP00000158256	TRANSLATION	protein_coding	-	CCDS37859.1	-	72	0	0	3.9	50.5	0	-2,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000024261	Syt4	ENSMUST00000025110	ENSMUSP00000025110	TRANSLATION	protein_coding	-	CCDS29109.1	1	425	19	3	12.8	149.1	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000073514	Dok6	ENSMUST00000160328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073514	Dok6	ENSMUST00000097495	ENSMUSP00000095103	TRANSLATION	protein_coding	-	CCDS37878.1	1	331	0	2.975	10.3	102.5	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000056671	Prelid2	ENSMUST00000070949	ENSMUSP00000064661	TRANSLATION	protein_coding	-	-	1	174	0	2.64	0	147.9	0	-4,-5	-	-	10.896	MINOR
ENSMUSG00000056671	Prelid2	ENSMUST00000235606	ENSMUSP00000157706	TRANSLATION	protein_coding	-	CCDS37794.1	-	177	0	2.74	13	162.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000056671	Prelid2	ENSMUST00000236542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024231	Cul2	ENSMUST00000025073	ENSMUSP00000025073	TRANSLATION	protein_coding	-	-	1	706	0	14.805	0	623.2	0	-4,-6	-	-	6.948	MINOR
ENSMUSG00000024231	Cul2	ENSMUST00000234843	ENSMUSP00000157267	TRANSLATION	nonsense_mediated_decay	-	-	-	49	0	1.066	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024231	Cul2	ENSMUST00000161317	ENSMUSP00000123903	TRANSLATION	protein_coding	stop	-	5	582	0	11.755	0	495.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024231	Cul2	ENSMUST00000162301	ENSMUSP00000125403	TRANSLATION	protein_coding	-	CCDS29032.2	1	745	0	15.805	19.5	674.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024231	Cul2	ENSMUST00000234414	ENSMUSP00000157136	TRANSLATION	nonsense_mediated_decay	-	-	-	111	0	3.08	0	45.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024231	Cul2	ENSMUST00000080089	ENSMUSP00000078988	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	2.08	0	27.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024231	Cul2	ENSMUST00000159443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024411	Aqp4	ENSMUST00000234391	ENSMUSP00000157347	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000234533	ENSMUSP00000157261	TRANSLATION	protein_coding	stop	-	-	83	1	1	0	25.2	3	0,-3	-	-	-1	MINOR
ENSMUSG00000024411	Aqp4	ENSMUST00000234643	ENSMUSP00000157060	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000234053	ENSMUSP00000157337	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000234624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024411	Aqp4	ENSMUST00000234140	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024411	Aqp4	ENSMUST00000234518	ENSMUSP00000157239	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000079081	ENSMUSP00000078088	TRANSLATION	protein_coding	-	CCDS29073.1	1	323	8	6.146	11.5	247.3	8	-4,-1	-	-	21.28	PRINCIPAL:2
ENSMUSG00000024411	Aqp4	ENSMUST00000234473	ENSMUSP00000157152	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000235044	ENSMUSP00000157000	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024411	Aqp4	ENSMUST00000238946	ENSMUSP00000159185	TRANSLATION	protein_coding	-	-	-	330	8	5.75	0	247.3	8	1,-3	-	-	17.208	MINOR
ENSMUSG00000024411	Aqp4	ENSMUST00000234466	ENSMUSP00000157324	TRANSLATION	protein_coding	-	-	-	301	8	5.75	13.8	247.3	8	1,-3	-	-	21.208	ALTERNATIVE:1
ENSMUSG00000024521	Pmaip1	ENSMUST00000025399	ENSMUSP00000025399	TRANSLATION	protein_coding	-	CCDS29315.1	1	103	0	0	1.5	142	0	-4,-1	-	-	6.132	PRINCIPAL:1
ENSMUSG00000024521	Pmaip1	ENSMUST00000237161	ENSMUSP00000158228	TRANSLATION	protein_coding	-	-	-	51	0	0	4.8	93.9	0	-4,-7	-	-	4.114	MINOR
ENSMUSG00000024521	Pmaip1	ENSMUST00000236933	ENSMUSP00000158157	TRANSLATION	protein_coding	-	-	-	54	0	0	1.2	104.5	0	-4,-2	-	-	3.803	MINOR
ENSMUSG00000040560	Wdr7	ENSMUST00000072726	ENSMUSP00000072509	TRANSLATION	protein_coding	-	CCDS50307.1	1	1489	0	5.7436	7.5	70.6	0	-4,-7	-	-	15	PRINCIPAL:2
ENSMUSG00000040560	Wdr7	ENSMUST00000238193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040560	Wdr7	ENSMUST00000236879	ENSMUSP00000158252	TRANSLATION	protein_coding	-	-	-	1457	0	5.7436	6.3	70.6	0	-4,-7	-	-	14.445	ALTERNATIVE:1
ENSMUSG00000040560	Wdr7	ENSMUST00000235648	ENSMUSP00000157457	TRANSLATION	protein_coding	-	-	-	531	0	2.965	0	34.5	0	-4,-7	-	-	3.378	MINOR
ENSMUSG00000040560	Wdr7	ENSMUST00000236956	ENSMUSP00000157696	TRANSLATION	nonsense_mediated_decay	-	-	-	488	0	2.365	0	13.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040560	Wdr7	ENSMUST00000235428	ENSMUSP00000157794	TRANSLATION	protein_coding	start/stop	-	-	178	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033319	Fem1c	ENSMUST00000036226	ENSMUSP00000038816	TRANSLATION	protein_coding	-	CCDS29231.1	1	617	0	0.64	17	157.1	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000024617	Camk2a	ENSMUST00000102888	ENSMUSP00000099952	TRANSLATION	protein_coding	-	CCDS29276.1	1	478	22	13.1	19.5	472.5	1	-4,-5	-	-	21.736	PRINCIPAL:2
ENSMUSG00000024617	Camk2a	ENSMUST00000137805	ENSMUSP00000123480	TRANSLATION	protein_coding	start/stop	-	3	177	18	5.11	0	143.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024617	Camk2a	ENSMUST00000025519	ENSMUSP00000025519	TRANSLATION	protein_coding	-	-	5	489	22	13.232	14	472.5	1	-4,-5	-	-	20.812	ALTERNATIVE:1
ENSMUSG00000024617	Camk2a	ENSMUST00000115295	ENSMUSP00000110950	TRANSLATION	protein_coding	-	CCDS29277.1	1	200	4	3.732	0.5	220.3	0	2,-3	-	-	0	MINOR
ENSMUSG00000024617	Camk2a	ENSMUST00000115297	ENSMUSP00000110952	TRANSLATION	protein_coding	-	-	2	108	8	1.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024617	Camk2a	ENSMUST00000039904	ENSMUSP00000048325	TRANSLATION	protein_coding	-	CCDS70898.1	5	189	4	3.6	0.5	220.3	0	2,-3	-	-	0	MINOR
ENSMUSG00000024617	Camk2a	ENSMUST00000134496	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024622	Hmgxb3	ENSMUST00000235236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024622	Hmgxb3	ENSMUST00000235663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024622	Hmgxb3	ENSMUST00000237101	ENSMUSP00000157699	TRANSLATION	nonsense_mediated_decay	start	-	-	184	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024622	Hmgxb3	ENSMUST00000237498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024622	Hmgxb3	ENSMUST00000237443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024622	Hmgxb3	ENSMUST00000235480	ENSMUSP00000158376	TRANSLATION	protein_coding	-	-	-	1286	8	0.6	0.5	45.6	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024622	Hmgxb3	ENSMUST00000237535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024622	Hmgxb3	ENSMUST00000236068	ENSMUSP00000157514	TRANSLATION	nonsense_mediated_decay	-	-	-	421	4	0.6	0	45.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024622	Hmgxb3	ENSMUST00000091884	ENSMUSP00000089498	TRANSLATION	protein_coding	-	CCDS50301.1	1	1254	8	0.6	0.5	45.6	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000102312	Pcdha3	ENSMUST00000192503	ENSMUSP00000141989	TRANSLATION	protein_coding	-	CCDS79615.1	1	942	50	1	1.5	549.1	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000063687	Pcdhb5	ENSMUST00000078271	ENSMUSP00000077389	TRANSLATION	protein_coding	-	CCDS29173.1	-	792	55	0.8	0.5	448.7	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024579	Pcyox1l	ENSMUST00000025472	ENSMUSP00000025472	TRANSLATION	protein_coding	-	CCDS29287.1	1	495	31	0.84	1.7	524.5	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024579	Pcyox1l	ENSMUST00000154763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024579	Pcyox1l	ENSMUST00000195229	ENSMUSP00000142249	TRANSLATION	nonsense_mediated_decay	-	-	5	111	16	0.64	0	45.1	0	1,-3	-	-	-1	MINOR
ENSMUSG00000102428	Pcdhga12	ENSMUST00000193045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000102428	Pcdhga12	ENSMUST00000044851	ENSMUSP00000036359	TRANSLATION	protein_coding	-	CCDS29191.1	1	932	49	1	0.5	536	0	-3,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024501	Dpysl3	ENSMUST00000237707	ENSMUSP00000158446	TRANSLATION	nonsense_mediated_decay	-	-	-	61	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024501	Dpysl3	ENSMUST00000124207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024501	Dpysl3	ENSMUST00000121805	ENSMUSP00000112928	TRANSLATION	protein_coding	-	CCDS79639.1	1	683	2	12	6.3	137.3	0	-4,-5	-	-	14.471	MINOR
ENSMUSG00000024501	Dpysl3	ENSMUST00000118071	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024501	Dpysl3	ENSMUST00000025379	ENSMUSP00000025379	TRANSLATION	protein_coding	-	CCDS37801.1	1	570	2	12.5	11.8	137.3	0	-4,-6	-	-	17	PRINCIPAL:1
ENSMUSG00000024501	Dpysl3	ENSMUST00000118043	ENSMUSP00000113711	TRANSLATION	protein_coding	-	CCDS50269.1	1	568	2	12	1.5	137.3	0	-4,-7	-	-	13.136	MINOR
ENSMUSG00000073600	Prob1	ENSMUST00000190196	ENSMUSP00000140465	TRANSLATION	protein_coding	-	CCDS79611.1	-	1010	0	0	0.5	83.1	0	-3,1	-	-	6	PRINCIPAL:1
ENSMUSG00000073600	Prob1	ENSMUST00000237307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073600	Prob1	ENSMUST00000097619	ENSMUSP00000095224	TRANSLATION	protein_coding	start	-	-	1006	0	0	0	83.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000054321	Taf4b	ENSMUST00000169862	ENSMUSP00000126909	TRANSLATION	protein_coding	-	CCDS50227.1	5	855	0	3.6	0.5	352.5	0	-2,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000054321	Taf4b	ENSMUST00000234789	ENSMUSP00000157354	TRANSLATION	protein_coding	-	-	-	850	0	3.6	1.5	352.5	0	-2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000043991	Pura	ENSMUST00000051301	ENSMUSP00000059404	TRANSLATION	protein_coding	-	CCDS29151.1	1	321	0	0.48	1.5	361.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058152	Chsy3	ENSMUST00000080721	ENSMUSP00000079546	TRANSLATION	protein_coding	-	CCDS37829.1	1	884	5	0.16	7.5	662.8	0	2,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000058152	Chsy3	ENSMUST00000237594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058152	Chsy3	ENSMUST00000238155	ENSMUSP00000158180	TRANSLATION	nonsense_mediated_decay	-	-	-	884	5	0.16	7.5	662.8	0	2,-4	-	-	-1	MINOR
ENSMUSG00000044176	Spink10	ENSMUST00000160316	ENSMUSP00000158416	TRANSLATION	protein_coding	stop	-	5	107	0	1.778	0	37.2	4	0,-3	-	-	-1	MINOR
ENSMUSG00000044176	Spink10	ENSMUST00000087562	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044176	Spink10	ENSMUST00000055725	ENSMUSP00000062976	TRANSLATION	protein_coding	-	CCDS29293.1	1	162	0	3.178	1.5	100.7	4	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000044176	Spink10	ENSMUST00000162365	ENSMUSP00000125171	TRANSLATION	protein_coding	-	-	1	146	0	1.778	0.5	36.2	4	0,-4	-	-	5.328	MINOR
ENSMUSG00000044176	Spink10	ENSMUST00000161674	ENSMUSP00000157841	TRANSLATION	protein_coding	stop	-	5	51	0	0.15	0	0	2	0,-3	-	-	-1	MINOR
ENSMUSG00000044176	Spink10	ENSMUST00000162511	ENSMUSP00000125330	TRANSLATION	protein_coding	-	-	1	88	0	1.778	0	64.5	2	2,-3	-	-	7.026	MINOR
ENSMUSG00000044176	Spink10	ENSMUST00000163259	ENSMUSP00000128279	TRANSLATION	protein_coding	stop	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000104063	Pcdhgb7	ENSMUST00000194928	ENSMUSP00000141997	TRANSLATION	protein_coding	-	CCDS79633.1	1	929	53	1	0.5	514.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000047161	Chst9	ENSMUST00000053017	ENSMUSP00000049975	TRANSLATION	protein_coding	-	CCDS29074.1	1	413	0	0	1.5	205.2	0	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000047161	Chst9	ENSMUST00000130553	ENSMUSP00000121484	TRANSLATION	nonsense_mediated_decay	-	-	1	51	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000007440	Pcdha11	ENSMUST00000115658	ENSMUSP00000111322	TRANSLATION	protein_coding	-	CCDS37778.1	1	946	50	1	1.5	549.1	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000103310	Pcdha12	ENSMUST00000047614	ENSMUSP00000047609	TRANSLATION	protein_coding	-	CCDS29166.1	1	950	53	1	1.5	557	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036452	Arhgap26	ENSMUST00000151757	ENSMUSP00000122448	TRANSLATION	nonsense_mediated_decay	start	-	5	115	0	0.9	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036452	Arhgap26	ENSMUST00000141058	ENSMUSP00000119865	TRANSLATION	protein_coding	start	-	2	144	0	1.578	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036452	Arhgap26	ENSMUST00000133247	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036452	Arhgap26	ENSMUST00000097593	ENSMUSP00000095200	TRANSLATION	protein_coding	-	CCDS29205.1	5	814	0	14.208	7.5	515.9	0	-4,-5	-	-	14.499	PRINCIPAL:2
ENSMUSG00000036452	Arhgap26	ENSMUST00000115574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036452	Arhgap26	ENSMUST00000123820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036452	Arhgap26	ENSMUST00000154551	ENSMUSP00000123145	TRANSLATION	protein_coding	start	-	1	388	0	8.328	0	181.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036452	Arhgap26	ENSMUST00000148399	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036452	Arhgap26	ENSMUST00000137497	ENSMUSP00000121197	TRANSLATION	protein_coding	-	-	1	722	0	13.43	8.8	515.9	0	-4,-5	-	-	13.446	ALTERNATIVE:1
ENSMUSG00000036452	Arhgap26	ENSMUST00000235660	ENSMUSP00000157675	TRANSLATION	protein_coding	start	-	-	132	0	1.978	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000036452	Arhgap26	ENSMUST00000235817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036452	Arhgap26	ENSMUST00000155576	ENSMUSP00000122371	TRANSLATION	protein_coding	-	-	5	759	0	13.91	8.8	515.9	0	-4,-5	-	-	14.406	ALTERNATIVE:1
ENSMUSG00000024306	Ccdc178	ENSMUST00000234661	ENSMUSP00000157287	TRANSLATION	protein_coding	stop	-	-	45	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024306	Ccdc178	ENSMUST00000234736	ENSMUSP00000157323	TRANSLATION	protein_coding	-	CCDS29092.1	-	866	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024306	Ccdc178	ENSMUST00000115837	ENSMUSP00000111503	TRANSLATION	protein_coding	-	CCDS29092.1	1	866	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024306	Ccdc178	ENSMUST00000025160	ENSMUSP00000025160	TRANSLATION	protein_coding	-	CCDS29092.1	1	866	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000051663	Pcdhb1	ENSMUST00000052366	ENSMUSP00000057519	TRANSLATION	protein_coding	-	CCDS29169.1	-	818	56	0.8	6.3	416.3	0	-2,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000117621	Hspe1-rs1	ENSMUST00000234633	ENSMUSP00000157281	TRANSLATION	protein_coding	-	-	-	102	0	1	17.5	102	0	-2,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000042705	Commd10	ENSMUST00000234952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042705	Commd10	ENSMUST00000234124	ENSMUSP00000157292	TRANSLATION	nonsense_mediated_decay	-	-	-	190	0	0	0	25.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234944	ENSMUSP00000156998	TRANSLATION	nonsense_mediated_decay	-	-	-	197	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234701	ENSMUSP00000157272	TRANSLATION	protein_coding	-	-	-	165	0	0	0	63.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234280	ENSMUSP00000157358	TRANSLATION	protein_coding	-	-	-	150	0	0	0.5	63	0	-4,-5	-	-	5.952	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234961	ENSMUSP00000157148	TRANSLATION	protein_coding	-	-	-	187	0	0	0.5	26.5	0	-4,-5	-	-	2.502	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042705	Commd10	ENSMUST00000234376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042705	Commd10	ENSMUST00000234085	ENSMUSP00000157146	TRANSLATION	protein_coding	-	-	-	113	0	0	0.5	63.5	0	-4,-6	-	-	6	MINOR
ENSMUSG00000042705	Commd10	ENSMUST00000234069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042705	Commd10	ENSMUST00000049388	ENSMUSP00000041650	TRANSLATION	protein_coding	-	CCDS29238.1	1	202	0	0	7.5	63.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000051439	Cd14	ENSMUST00000237042	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051439	Cd14	ENSMUST00000061829	ENSMUSP00000056669	TRANSLATION	protein_coding	-	CCDS29159.1	1	366	0	1	0.5	0	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000090942	F830016B08Rik	ENSMUST00000171297	ENSMUSP00000131437	TRANSLATION	protein_coding	-	CCDS50297.1	1	416	12	1	0.5	431.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024395	Lims2	ENSMUST00000223753	ENSMUSP00000153122	TRANSLATION	protein_coding	stop	-	-	206	12	2.3384	0	52.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024395	Lims2	ENSMUST00000225400	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024395	Lims2	ENSMUST00000025254	ENSMUSP00000025254	TRANSLATION	protein_coding	-	CCDS29113.1	1	341	35	7.7884	10.3	233	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000024395	Lims2	ENSMUST00000225404	ENSMUSP00000153218	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024395	Lims2	ENSMUST00000224383	ENSMUSP00000152960	TRANSLATION	protein_coding	stop	-	-	153	18	3.75	0	99.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024395	Lims2	ENSMUST00000225125	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024395	Lims2	ENSMUST00000224328	ENSMUSP00000153433	TRANSLATION	protein_coding	start	-	-	59	5	1.43	0	28.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024395	Lims2	ENSMUST00000234678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024395	Lims2	ENSMUST00000226112	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024395	Lims2	ENSMUST00000233994	ENSMUSP00000157357	TRANSLATION	protein_coding	stop	-	-	164	20	4.08	0	124.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024395	Lims2	ENSMUST00000225470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024395	Lims2	ENSMUST00000234549	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053950	Adnp2	ENSMUST00000066743	ENSMUSP00000068560	TRANSLATION	protein_coding	-	CCDS50332.1	1	1165	15	0	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045094	Arhgef37	ENSMUST00000171629	ENSMUSP00000130560	TRANSLATION	protein_coding	-	CCDS50302.1	5	676	0	5.52	1.5	231.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045094	Arhgef37	ENSMUST00000237557	ENSMUSP00000157956	TRANSLATION	protein_coding	stop	-	-	135	0	2	0	72.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045094	Arhgef37	ENSMUST00000236608	ENSMUSP00000157463	TRANSLATION	nonsense_mediated_decay	-	-	-	536	0	3.68	0	149.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000042211	Fbxo38	ENSMUST00000237378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042211	Fbxo38	ENSMUST00000236904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042211	Fbxo38	ENSMUST00000048688	ENSMUSP00000047541	TRANSLATION	protein_coding	-	CCDS37841.1	1	1194	0	0	0.5	23.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042211	Fbxo38	ENSMUST00000235807	ENSMUSP00000158310	TRANSLATION	protein_coding	stop	-	-	179	0	0	0	23.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033960	Jcad	ENSMUST00000234494	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033960	Jcad	ENSMUST00000234153	ENSMUSP00000157313	TRANSLATION	protein_coding	-	CCDS37719.1	-	1320	0	0	0.5	1891.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033960	Jcad	ENSMUST00000037029	ENSMUSP00000038613	TRANSLATION	protein_coding	-	CCDS37719.1	5	1320	0	0	0.5	1891.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033628	Pik3c3	ENSMUST00000115811	ENSMUSP00000111478	TRANSLATION	protein_coding	-	-	1	756	0	15.14	0	452.4	0	-4,-5	-	-	3.75	MINOR
ENSMUSG00000033628	Pik3c3	ENSMUST00000091978	ENSMUSP00000089601	TRANSLATION	protein_coding	-	-	1	848	0	17.14	0	489.9	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000033628	Pik3c3	ENSMUST00000115812	ENSMUSP00000111479	TRANSLATION	protein_coding	-	CCDS37752.1	1	887	0	18.14	9.5	489.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000033628	Pik3c3	ENSMUST00000131405	ENSMUSP00000128927	TRANSLATION	nonsense_mediated_decay	-	-	1	513	0	8.34	0	341.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042834	Nrep	ENSMUST00000051087	ENSMUSP00000058132	TRANSLATION	protein_coding	-	CCDS37756.1	1	68	0	0	6.3	118.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000042834	Nrep	ENSMUST00000237066	ENSMUSP00000157912	TRANSLATION	protein_coding	-	CCDS37756.1	-	68	0	0	6.3	118.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000042834	Nrep	ENSMUST00000171533	ENSMUSP00000127787	TRANSLATION	protein_coding	-	CCDS37756.1	2	68	0	0	6.3	118.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000042834	Nrep	ENSMUST00000168890	ENSMUSP00000130297	TRANSLATION	protein_coding	-	CCDS37756.1	1	68	0	0	6.3	118.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000024259	Slc25a46	ENSMUST00000233997	ENSMUSP00000157089	TRANSLATION	nonsense_mediated_decay	-	-	-	239	0	0	0	22.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024259	Slc25a46	ENSMUST00000060396	ENSMUSP00000053325	TRANSLATION	protein_coding	-	CCDS29110.1	1	418	0	0	1.5	63	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024601	Isoc1	ENSMUST00000025503	ENSMUSP00000025503	TRANSLATION	protein_coding	-	CCDS29265.1	1	297	0	3.4	5.1	0	0	-3,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000024601	Isoc1	ENSMUST00000238139	ENSMUSP00000157494	TRANSLATION	protein_coding	-	-	-	257	0	2.6	0	0	0	-3,-5	-	-	4.398	MINOR
ENSMUSG00000051050	Spink14	ENSMUST00000162265	ENSMUSP00000125319	TRANSLATION	protein_coding	-	CCDS37806.1	1	96	0	1.3	1.5	47.1	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000051050	Spink14	ENSMUST00000060328	ENSMUSP00000057781	TRANSLATION	protein_coding	-	CCDS37806.1	5	96	0	1.3	1.5	47.1	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000051050	Spink14	ENSMUST00000237843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060275	Nrg2	ENSMUST00000115705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060275	Nrg2	ENSMUST00000115712	ENSMUSP00000111377	TRANSLATION	protein_coding	start/stop	-	5	210	0	1.25	0	349.3	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000060275	Nrg2	ENSMUST00000115713	ENSMUSP00000111378	TRANSLATION	protein_coding	-	CCDS50255.1	5	857	3	4.65	0.5	618.9	3	-4,-2	-	-	14.16	PRINCIPAL:2
ENSMUSG00000060275	Nrg2	ENSMUST00000237681	ENSMUSP00000158329	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	0.8	0	24	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060275	Nrg2	ENSMUST00000239409	ENSMUSP00000159288	TRANSLATION	protein_coding	-	-	-	643	3	5.07	0	618.9	3	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000060275	Nrg2	ENSMUST00000225173	ENSMUSP00000157746	TRANSLATION	protein_coding	start/stop	-	-	109	4	3.116	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024535	Snx24	ENSMUST00000165032	ENSMUSP00000131423	TRANSLATION	protein_coding	-	CCDS29251.1	1	169	0	4.082	17	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024535	Snx24	ENSMUST00000025417	ENSMUSP00000025417	TRANSLATION	protein_coding	-	CCDS29251.1	1	169	0	4.082	17	57.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024535	Snx24	ENSMUST00000235675	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024535	Snx24	ENSMUST00000236830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000110185	Igip	ENSMUST00000210490	ENSMUSP00000147405	TRANSLATION	protein_coding	-	CCDS84375.1	-	53	0	0	6.3	0	0	-3,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000071862	Lrrtm2	ENSMUST00000236530	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071862	Lrrtm2	ENSMUST00000236680	ENSMUSP00000157843	TRANSLATION	protein_coding	-	-	-	268	0	0.8	0	38	1	-4,-5	-	-	2.664	MINOR
ENSMUSG00000071862	Lrrtm2	ENSMUST00000091636	ENSMUSP00000089225	TRANSLATION	protein_coding	-	CCDS50251.1	1	515	0	1.8	12.8	150.4	1	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000024404	Riok3	ENSMUST00000235106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000235084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234985	ENSMUSP00000157181	TRANSLATION	protein_coding	start	-	-	156	5	2.8	0	105.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024404	Riok3	ENSMUST00000234021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000235060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024404	Riok3	ENSMUST00000234415	ENSMUSP00000157248	TRANSLATION	nonsense_mediated_decay	start	-	-	61	3	1	0	66.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024404	Riok3	ENSMUST00000234762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234310	ENSMUSP00000157374	TRANSLATION	nonsense_mediated_decay	start	-	-	136	0	0.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024404	Riok3	ENSMUST00000234148	ENSMUSP00000157045	TRANSLATION	nonsense_mediated_decay	-	-	-	272	6	1.15	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024404	Riok3	ENSMUST00000234931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000234006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024404	Riok3	ENSMUST00000025270	ENSMUSP00000025270	TRANSLATION	protein_coding	-	CCDS29062.1	1	519	20	6.1	8.8	249.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000038121	Fam210a	ENSMUST00000152193	ENSMUSP00000122677	TRANSLATION	protein_coding	stop	-	2	107	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000038121	Fam210a	ENSMUST00000042852	ENSMUSP00000045927	TRANSLATION	protein_coding	-	CCDS29326.1	1	273	0	0	1.5	81.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000025420	Katnal2	ENSMUST00000126153	ENSMUSP00000122079	TRANSLATION	protein_coding	-	-	1	539	15	7.44	5.1	152.3	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025420	Katnal2	ENSMUST00000137354	ENSMUSP00000118511	TRANSLATION	protein_coding	-	-	5	277	12	6.04	0	123.2	0	-4,-5	-	-	11.454	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000138336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025420	Katnal2	ENSMUST00000026486	ENSMUSP00000026486	TRANSLATION	protein_coding	-	CCDS37865.1	1	409	12	5.28	0.5	136.8	0	-4,-6	-	-	10.752	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000122984	ENSMUSP00000118424	TRANSLATION	nonsense_mediated_decay	-	-	5	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000154665	ENSMUSP00000119066	TRANSLATION	protein_coding	-	-	1	217	0	0	0	29.1	0	-4,-6	-	-	0	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000137498	ENSMUSP00000117495	TRANSLATION	protein_coding	-	-	5	495	15	7.44	0	123.2	0	-4,-5	-	-	16.254	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000135029	ENSMUSP00000115411	TRANSLATION	nonsense_mediated_decay	-	-	2	372	12	4.398	0	114.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025420	Katnal2	ENSMUST00000125744	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025420	Katnal2	ENSMUST00000154053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025420	Katnal2	ENSMUST00000123650	ENSMUSP00000115489	TRANSLATION	protein_coding	-	-	1	85	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000059852	Kcng2	ENSMUST00000184574	ENSMUSP00000139072	TRANSLATION	protein_coding	stop	-	3	152	3	1.12	0	78.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059852	Kcng2	ENSMUST00000077962	ENSMUSP00000077112	TRANSLATION	protein_coding	-	CCDS57127.1	5	480	3	1.98	1.5	202.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000059852	Kcng2	ENSMUST00000184366	ENSMUSP00000138920	TRANSLATION	protein_coding	stop	-	5	64	0	0.48	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059455	Plac8l1	ENSMUST00000081374	ENSMUSP00000080111	TRANSLATION	protein_coding	-	CCDS50266.1	1	177	0	0	5.1	44.8	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000059455	Plac8l1	ENSMUST00000236636	ENSMUSP00000158338	TRANSLATION	protein_coding	-	-	-	92	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024273	2700062C07Rik	ENSMUST00000234955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024273	2700062C07Rik	ENSMUST00000234303	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024273	2700062C07Rik	ENSMUST00000097646	ENSMUSP00000095251	TRANSLATION	protein_coding	-	CCDS29101.1	1	217	0	0	2.7	263.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024273	2700062C07Rik	ENSMUST00000234559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024273	2700062C07Rik	ENSMUST00000235029	ENSMUSP00000157335	TRANSLATION	nonsense_mediated_decay	-	-	-	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000033382	Trappc8	ENSMUST00000097658	ENSMUSP00000095262	TRANSLATION	protein_coding	-	CCDS29087.1	1	822	0	0	0.5	546.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000033382	Trappc8	ENSMUST00000223584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033382	Trappc8	ENSMUST00000225661	ENSMUSP00000153183	TRANSLATION	protein_coding	-	CCDS50233.1	-	1437	0	0	0.5	546.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000033382	Trappc8	ENSMUST00000224530	ENSMUSP00000152931	TRANSLATION	protein_coding	start/stop	-	-	112	0	0	0	153.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033382	Trappc8	ENSMUST00000225502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042942	Greb1l	ENSMUST00000174553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042942	Greb1l	ENSMUST00000172680	ENSMUSP00000134314	TRANSLATION	nonsense_mediated_decay	start	-	5	129	0	0	0	162.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042942	Greb1l	ENSMUST00000224958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042942	Greb1l	ENSMUST00000048977	ENSMUSP00000049003	TRANSLATION	protein_coding	-	CCDS37736.1	5	1913	0	0	1.5	3126.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000042942	Greb1l	ENSMUST00000173356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042942	Greb1l	ENSMUST00000172532	ENSMUSP00000134090	TRANSLATION	protein_coding	stop	-	5	991	0	0	0	866.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000042942	Greb1l	ENSMUST00000173261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024587	Nars	ENSMUST00000235887	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024587	Nars	ENSMUST00000236463	ENSMUSP00000158367	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000237400	ENSMUSP00000157402	TRANSLATION	protein_coding	-	CCDS50308.1	-	559	15	13.21	6.4	411.9	0	-4,-5	-	-	20	PRINCIPAL:2
ENSMUSG00000024587	Nars	ENSMUST00000235325	ENSMUSP00000157468	TRANSLATION	protein_coding	stop	-	-	210	0	5.71	0	45.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000237503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024587	Nars	ENSMUST00000237831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024587	Nars	ENSMUST00000025483	ENSMUSP00000025483	TRANSLATION	protein_coding	-	-	1	558	15	13.21	6.4	411.9	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000024587	Nars	ENSMUST00000237027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024587	Nars	ENSMUST00000236186	ENSMUSP00000158356	TRANSLATION	protein_coding	-	-	-	517	12	12.21	0	356.6	0	-4,-5	-	-	10.686	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000235647	ENSMUSP00000157626	TRANSLATION	nonsense_mediated_decay	-	-	-	69	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000236873	ENSMUSP00000157502	TRANSLATION	nonsense_mediated_decay	-	-	-	127	0	3.06	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000236392	ENSMUSP00000158211	TRANSLATION	nonsense_mediated_decay	-	-	-	164	0	3.81	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000237585	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024587	Nars	ENSMUST00000237351	ENSMUSP00000158278	TRANSLATION	protein_coding	start	-	-	497	15	11.9	0	411.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000236583	ENSMUSP00000158408	TRANSLATION	nonsense_mediated_decay	-	-	-	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024587	Nars	ENSMUST00000237369	ENSMUSP00000157488	TRANSLATION	nonsense_mediated_decay	-	-	-	70	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051316	Taf7	ENSMUST00000066272	ENSMUSP00000065645	TRANSLATION	protein_coding	-	CCDS29189.1	1	341	0	1	1.5	205.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024563	Smad2	ENSMUST00000091831	ENSMUSP00000089439	TRANSLATION	protein_coding	-	CCDS79664.1	5	437	4	7.925	17	420.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024563	Smad2	ENSMUST00000165084	ENSMUSP00000132851	TRANSLATION	protein_coding	stop	-	5	204	4	2.825	0	153.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024563	Smad2	ENSMUST00000113930	ENSMUSP00000109563	TRANSLATION	protein_coding	-	-	5	434	4	6.925	0	382.2	0	-4,-5	-	-	11.728	MINOR
ENSMUSG00000024563	Smad2	ENSMUST00000168423	ENSMUSP00000130115	TRANSLATION	protein_coding	-	CCDS29350.1	1	467	4	7.425	17	413.6	0	-4,-5	-	-	18.608	MINOR
ENSMUSG00000024563	Smad2	ENSMUST00000172198	ENSMUSP00000129232	TRANSLATION	protein_coding	stop	-	5	58	0	1.5	0	34.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024563	Smad2	ENSMUST00000171256	ENSMUSP00000125883	TRANSLATION	protein_coding	stop	-	5	244	4	1.925	0	146.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024563	Smad2	ENSMUST00000025453	ENSMUSP00000025453	TRANSLATION	protein_coding	-	CCDS29350.1	1	467	4	7.425	17	413.6	0	-4,-5	-	-	18.608	MINOR
ENSMUSG00000104318	Pcdha7	ENSMUST00000192631	ENSMUSP00000142156	TRANSLATION	protein_coding	-	CCDS79619.1	1	937	49	1	1.5	500.7	0	1,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038418	Egr1	ENSMUST00000165033	ENSMUSP00000126931	TRANSLATION	protein_coding	-	CCDS29136.1	5	533	12	0.6	0.5	251	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000038418	Egr1	ENSMUST00000064795	ENSMUSP00000069616	TRANSLATION	protein_coding	-	CCDS29136.1	1	533	12	0.6	0.5	251	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024421	Lama3	ENSMUST00000092070	ENSMUSP00000089703	TRANSLATION	protein_coding	-	CCDS50222.1	5	3330	4	23.06	0.5	1476.9	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000024421	Lama3	ENSMUST00000188815	ENSMUSP00000140104	TRANSLATION	protein_coding	-	CCDS84360.1	1	1724	4	10.59	1.5	780.4	0	3,-2	-	-	4	MINOR
ENSMUSG00000024538	Ppic	ENSMUST00000025419	ENSMUSP00000025419	TRANSLATION	protein_coding	-	CCDS29252.1	1	212	8	4.8	6.3	161.1	0	1,-3	-	-	20	PRINCIPAL:1
ENSMUSG00000005873	Reep5	ENSMUST00000237414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005873	Reep5	ENSMUST00000235227	ENSMUSP00000158286	TRANSLATION	nonsense_mediated_decay	start	-	-	41	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000005873	Reep5	ENSMUST00000235153	ENSMUSP00000158509	TRANSLATION	protein_coding	stop	-	-	119	0	0	0	68.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000005873	Reep5	ENSMUST00000006027	ENSMUSP00000006027	TRANSLATION	protein_coding	-	CCDS50247.1	1	189	0	0	16.3	105.5	3	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000005873	Reep5	ENSMUST00000236887	ENSMUSP00000158434	TRANSLATION	protein_coding	start	-	-	103	0	0	0	0	0	-1,1	-	-	-1	MINOR
ENSMUSG00000055095	Spink6	ENSMUST00000236634	ENSMUSP00000157648	TRANSLATION	protein_coding	-	-	-	80	0	1.83	5.4	58.3	0	4,-1	-	-	13.574	PRINCIPAL:1
ENSMUSG00000055095	Spink6	ENSMUST00000068473	ENSMUSP00000069247	TRANSLATION	protein_coding	-	CCDS29224.1	1	105	0	1.83	2.7	58.3	0	4,-1	-	-	12.346	MINOR
ENSMUSG00000055095	Spink6	ENSMUST00000235436	ENSMUSP00000158333	TRANSLATION	protein_coding	-	-	-	94	0	1.97	0	58.3	0	-4,-6	-	-	12	MINOR
ENSMUSG00000055095	Spink6	ENSMUST00000237636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046668	Cxxc5	ENSMUST00000237291	ENSMUSP00000158040	TRANSLATION	protein_coding	stop	-	-	222	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046668	Cxxc5	ENSMUST00000060722	ENSMUSP00000054307	TRANSLATION	protein_coding	-	CCDS29150.1	1	317	8	1	1.5	30.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046668	Cxxc5	ENSMUST00000235404	ENSMUSP00000157410	TRANSLATION	protein_coding	stop	-	-	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046668	Cxxc5	ENSMUST00000235169	ENSMUSP00000157767	TRANSLATION	protein_coding	stop	-	-	205	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046668	Cxxc5	ENSMUST00000235161	ENSMUSP00000157747	TRANSLATION	protein_coding	stop	-	-	151	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046668	Cxxc5	ENSMUST00000235337	ENSMUSP00000158096	TRANSLATION	protein_coding	stop	-	-	211	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000103037	Pcdhgb1	ENSMUST00000195624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000103037	Pcdhgb1	ENSMUST00000192931	ENSMUSP00000141348	TRANSLATION	protein_coding	-	CCDS79624.1	1	918	51	1	0.5	514.3	0	1,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046982	Tshz1	ENSMUST00000175783	ENSMUSP00000157454	TRANSLATION	protein_coding	-	-	1	820	12	0	0	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000046982	Tshz1	ENSMUST00000235188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046982	Tshz1	ENSMUST00000237918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046982	Tshz1	ENSMUST00000060303	ENSMUSP00000089388	TRANSLATION	protein_coding	-	CCDS37876.1	1	1084	15	0.2	0.5	0	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024386	Proc	ENSMUST00000234386	ENSMUSP00000157122	TRANSLATION	protein_coding	stop	-	-	214	23	4.18	0	140	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024386	Proc	ENSMUST00000234651	ENSMUSP00000157269	TRANSLATION	protein_coding	-	CCDS29116.1	-	460	28	6.68	0.5	364	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024386	Proc	ENSMUST00000234746	ENSMUSP00000157002	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000024386	Proc	ENSMUST00000171765	ENSMUSP00000132226	TRANSLATION	protein_coding	-	CCDS29116.1	5	460	28	6.68	0.5	364	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024386	Proc	ENSMUST00000234649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024386	Proc	ENSMUST00000234657	ENSMUSP00000156986	TRANSLATION	protein_coding	stop	-	-	86	13	1.58	0	72.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024386	Proc	ENSMUST00000234375	ENSMUSP00000157207	TRANSLATION	protein_coding	stop	-	-	177	23	3.58	0	140	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024386	Proc	ENSMUST00000234198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044252	Osbpl1a	ENSMUST00000145777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044252	Osbpl1a	ENSMUST00000234194	ENSMUSP00000157017	TRANSLATION	protein_coding	-	CCDS57114.1	-	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000124570	ENSMUSP00000122291	TRANSLATION	protein_coding	stop	-	2	281	0	5.344	0	361.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000117361	ENSMUSP00000112681	TRANSLATION	protein_coding	-	CCDS57114.1	1	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000119512	ENSMUSP00000113914	TRANSLATION	protein_coding	-	CCDS57115.1	1	558	0	6.814	0.5	511.7	0	-4,-5	-	-	0.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000121774	ENSMUSP00000113268	TRANSLATION	protein_coding	-	-	1	410	0	6.55	0	511.7	0	-4,-6	-	-	0.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000141651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044252	Osbpl1a	ENSMUST00000122175	ENSMUSP00000113491	TRANSLATION	protein_coding	-	-	1	338	0	5.49	0	84.6	0	-4,-5	-	-	0	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000234427	ENSMUSP00000157046	TRANSLATION	protein_coding	stop	-	-	200	0	4.03	0	310.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000121888	ENSMUSP00000112895	TRANSLATION	protein_coding	-	CCDS57114.1	1	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000234118	ENSMUSP00000157020	TRANSLATION	protein_coding	-	-	-	528	0	6.814	0	511.7	0	-4,-5	-	-	0.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000118313	ENSMUSP00000113735	TRANSLATION	protein_coding	-	CCDS57114.1	1	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000155650	ENSMUSP00000120439	TRANSLATION	protein_coding	stop	-	5	187	0	1.664	0	80.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000132594	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044252	Osbpl1a	ENSMUST00000235027	ENSMUSP00000157209	TRANSLATION	protein_coding	-	-	-	547	0	6.814	0	511.7	0	-4,-5	-	-	0.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000074352	ENSMUSP00000073957	TRANSLATION	protein_coding	-	CCDS29067.1	1	950	0	12.304	2.7	596.3	0	-4,-5	-	-	12.79	PRINCIPAL:1
ENSMUSG00000044252	Osbpl1a	ENSMUST00000119043	ENSMUSP00000113357	TRANSLATION	protein_coding	-	CCDS57114.1	1	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000142467	ENSMUSP00000157336	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000234428	ENSMUSP00000156984	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0.664	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000154614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044252	Osbpl1a	ENSMUST00000234871	ENSMUSP00000157342	TRANSLATION	protein_coding	-	CCDS57114.1	-	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000143077	ENSMUSP00000122967	TRANSLATION	protein_coding	stop	-	3	184	0	3.164	0	236.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000147197	ENSMUSP00000114913	TRANSLATION	nonsense_mediated_decay	-	-	5	66	0	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044252	Osbpl1a	ENSMUST00000121808	ENSMUSP00000113841	TRANSLATION	protein_coding	-	CCDS57114.1	1	437	0	6.814	5.3	511.7	0	-4,-5	-	-	2.924	MINOR
ENSMUSG00000024350	Dnajc18	ENSMUST00000237995	ENSMUSP00000158370	TRANSLATION	protein_coding	stop	-	-	163	0	2.36	0	86.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024350	Dnajc18	ENSMUST00000025208	ENSMUSP00000025208	TRANSLATION	protein_coding	-	CCDS29148.1	1	357	0	2.36	6.4	175.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024350	Dnajc18	ENSMUST00000236738	ENSMUSP00000157688	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024350	Dnajc18	ENSMUST00000235930	ENSMUSP00000157528	TRANSLATION	nonsense_mediated_decay	start	-	-	68	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000091519	Skor2	ENSMUST00000166956	ENSMUSP00000132338	TRANSLATION	protein_coding	-	CCDS50322.1	1	1008	4	0	1.5	241.6	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000024471	Myot	ENSMUST00000025349	ENSMUSP00000025349	TRANSLATION	protein_coding	-	CCDS29228.1	1	496	0	4.92	7.5	129.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024471	Myot	ENSMUST00000115498	ENSMUSP00000111160	TRANSLATION	protein_coding	-	CCDS29228.1	5	496	0	4.92	7.5	129.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025428	Atp5a1	ENSMUST00000114748	ENSMUSP00000110396	TRANSLATION	protein_coding	-	-	1	503	14	11.08	2.4	310.6	0	-4,-5	-	-	16.548	MINOR
ENSMUSG00000025428	Atp5a1	ENSMUST00000135678	ENSMUSP00000120436	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	1.65	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025428	Atp5a1	ENSMUST00000146869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025428	Atp5a1	ENSMUST00000026495	ENSMUSP00000026495	TRANSLATION	protein_coding	-	CCDS29358.1	1	553	14	11.98	17	310.6	0	-4,0	-	-	22	PRINCIPAL:1
ENSMUSG00000025428	Atp5a1	ENSMUST00000128073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024456	Diaph1	ENSMUST00000080033	ENSMUSP00000078942	TRANSLATION	protein_coding	-	-	1	1255	0	22.36	0.5	924.3	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000024456	Diaph1	ENSMUST00000025337	ENSMUSP00000025337	TRANSLATION	protein_coding	-	CCDS79635.1	5	1264	0	22.36	0.5	925.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024456	Diaph1	ENSMUST00000124822	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024456	Diaph1	ENSMUST00000115634	ENSMUSP00000111297	TRANSLATION	protein_coding	-	CCDS57121.1	5	1255	0	22.36	0.5	925.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000024456	Diaph1	ENSMUST00000115631	ENSMUSP00000111294	TRANSLATION	protein_coding	-	CCDS84377.1	5	1220	0	22.36	0.5	925.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024456	Diaph1	ENSMUST00000127346	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024456	Diaph1	ENSMUST00000115629	ENSMUSP00000111292	TRANSLATION	protein_coding	-	-	5	1220	0	22.36	0.5	924.3	0	-4,-5	-	-	11.952	ALTERNATIVE:2
ENSMUSG00000024456	Diaph1	ENSMUST00000129688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045657	Pcdhb10	ENSMUST00000051126	ENSMUSP00000056420	TRANSLATION	protein_coding	-	CCDS29177.1	-	797	53	1	0.5	446.2	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000050321	Neto1	ENSMUST00000236600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050321	Neto1	ENSMUST00000235167	ENSMUSP00000158106	TRANSLATION	protein_coding	start	-	-	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050321	Neto1	ENSMUST00000058829	ENSMUSP00000057340	TRANSLATION	protein_coding	-	CCDS29387.1	1	533	3	2.66	13.7	163.3	0	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000024474	Ik	ENSMUST00000235721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024474	Ik	ENSMUST00000235693	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024474	Ik	ENSMUST00000007042	ENSMUSP00000007042	TRANSLATION	protein_coding	-	CCDS57119.1	1	557	0	0	9.6	505.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024474	Ik	ENSMUST00000237774	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024474	Ik	ENSMUST00000224284	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024474	Ik	ENSMUST00000236760	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024474	Ik	ENSMUST00000235165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024474	Ik	ENSMUST00000237095	ENSMUSP00000158258	TRANSLATION	protein_coding	stop	-	-	133	0	0	0	152.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024474	Ik	ENSMUST00000237809	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073568	Arl14epl	ENSMUST00000234910	ENSMUSP00000157009	TRANSLATION	protein_coding	-	CCDS29237.1	-	152	2	0	6.3	122.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000073568	Arl14epl	ENSMUST00000097580	ENSMUSP00000095187	TRANSLATION	protein_coding	-	CCDS29237.1	1	152	2	0	6.3	122.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024548	Setbp1	ENSMUST00000025430	ENSMUSP00000025430	TRANSLATION	protein_coding	-	CCDS29362.2	5	1582	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000069372	Ctxn3	ENSMUST00000209782	ENSMUSP00000147740	TRANSLATION	protein_coding	stop	-	3	32	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069372	Ctxn3	ENSMUST00000091892	ENSMUSP00000089507	TRANSLATION	protein_coding	-	CCDS50294.1	1	80	0	0	7.5	135.9	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000069372	Ctxn3	ENSMUST00000209786	ENSMUSP00000147982	TRANSLATION	protein_coding	-	CCDS50294.1	5	80	0	0	7.5	135.9	1	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000001473	Tubb6	ENSMUST00000001513	ENSMUSP00000001513	TRANSLATION	protein_coding	-	CCDS29321.1	1	447	19	3.5	1.5	376.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000001473	Tubb6	ENSMUST00000236667	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024497	Pou4f3	ENSMUST00000025374	ENSMUSP00000025374	TRANSLATION	protein_coding	-	CCDS29212.1	1	338	0	0.64	11	168.2	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024497	Pou4f3	ENSMUST00000237247	ENSMUSP00000158000	TRANSLATION	protein_coding	-	-	-	256	0	0.64	0	168.2	0	-4,-7	-	-	12	MINOR
ENSMUSG00000044393	Dsg2	ENSMUST00000059787	ENSMUSP00000057096	TRANSLATION	protein_coding	-	CCDS29084.1	1	1122	41	10.4	0.5	160.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000044393	Dsg2	ENSMUST00000120102	ENSMUSP00000113153	TRANSLATION	protein_coding	-	-	1	360	23	6.5	0	109.2	0	0,-3	-	-	2.922	MINOR
ENSMUSG00000044393	Dsg2	ENSMUST00000121837	ENSMUSP00000113029	TRANSLATION	protein_coding	-	-	1	292	20	5.598	0	74.7	0	0,-3	-	-	0.852	MINOR
ENSMUSG00000033871	Ppargc1b	ENSMUST00000142134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033871	Ppargc1b	ENSMUST00000063307	ENSMUSP00000069431	TRANSLATION	protein_coding	-	-	1	1030	0	0	0	37.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000033871	Ppargc1b	ENSMUST00000075299	ENSMUSP00000074771	TRANSLATION	protein_coding	-	CCDS29284.1	1	1014	0	0	0.5	37.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000024580	Grpel2	ENSMUST00000237466	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024580	Grpel2	ENSMUST00000062991	ENSMUSP00000053440	TRANSLATION	protein_coding	-	CCDS29288.1	1	224	0	1.51	6.3	128.1	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000024580	Grpel2	ENSMUST00000238010	ENSMUSP00000158353	TRANSLATION	protein_coding	-	-	-	111	0	1.03	0	26.2	0	-4,0	-	-	4.092	MINOR
ENSMUSG00000024360	Etf1	ENSMUST00000025218	ENSMUSP00000025218	TRANSLATION	protein_coding	-	CCDS29137.1	1	437	0	9.25	13	359.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000048347	Pcdhb18	ENSMUST00000055949	ENSMUSP00000052113	TRANSLATION	protein_coding	-	CCDS29184.1	-	792	51	0.6	1.5	445.6	0	2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000019647	Sema6a	ENSMUST00000123228	ENSMUSP00000120249	TRANSLATION	protein_coding	start	-	5	111	0	1.566	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019647	Sema6a	ENSMUST00000115449	ENSMUSP00000111109	TRANSLATION	protein_coding	-	-	5	1005	0	13.83	0	451.9	2	3,-2	-	-	9.09	MINOR
ENSMUSG00000019647	Sema6a	ENSMUST00000076043	ENSMUSP00000075420	TRANSLATION	protein_coding	-	CCDS79642.1	1	976	0	14.646	8.8	473.2	2	3,-2	-	-	15	ALTERNATIVE:1
ENSMUSG00000019647	Sema6a	ENSMUST00000144223	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019647	Sema6a	ENSMUST00000151382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019647	Sema6a	ENSMUST00000135790	ENSMUSP00000120011	TRANSLATION	protein_coding	-	-	5	1048	0	14.646	6.3	473.2	2	3,-2	-	-	14.037	ALTERNATIVE:1
ENSMUSG00000019647	Sema6a	ENSMUST00000126684	ENSMUSP00000118655	TRANSLATION	protein_coding	stop	-	3	216	0	6.5	0	152	0	3,-2	-	-	-1	MINOR
ENSMUSG00000019647	Sema6a	ENSMUST00000019791	ENSMUSP00000019791	TRANSLATION	protein_coding	-	CCDS37813.1	1	1031	0	14.646	6.3	473.2	2	3,-2	-	-	14.037	PRINCIPAL:3
ENSMUSG00000019647	Sema6a	ENSMUST00000141224	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019647	Sema6a	ENSMUST00000156422	ENSMUSP00000121442	TRANSLATION	protein_coding	-	CCDS37813.1	5	1031	0	14.646	6.3	473.2	2	3,-2	-	-	14.037	PRINCIPAL:3
ENSMUSG00000102836	Gm37013	ENSMUST00000194544	ENSMUSP00000141847	TRANSLATION	protein_coding,RT	start/stop	-	5	104	0	0	0	22.7	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000024553	Galr1	ENSMUST00000065224	ENSMUSP00000066381	TRANSLATION	protein_coding	-	CCDS29372.1	1	348	0	1.69	7.5	185.9	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000040446	Rprd1a	ENSMUST00000234403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040446	Rprd1a	ENSMUST00000234721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040446	Rprd1a	ENSMUST00000046206	ENSMUSP00000043618	TRANSLATION	protein_coding	-	CCDS29102.1	1	312	0	6.4	12.8	269.9	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024283	Wac	ENSMUST00000166378	ENSMUSP00000128060	TRANSLATION	protein_coding	stop	-	3	27	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000168446	ENSMUSP00000131032	TRANSLATION	protein_coding	stop	-	5	222	0	1.344	0	38.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000166062	ENSMUSP00000132532	TRANSLATION	protein_coding	stop	-	1	339	0	1.344	0	38.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000172018	ENSMUSP00000128321	TRANSLATION	protein_coding	-	-	5	597	0	1.344	4.1	38.8	0	-4,-5	-	-	13.275	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000167057	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024283	Wac	ENSMUST00000171486	ENSMUSP00000127848	TRANSLATION	protein_coding	-	-	5	495	0	1.344	2.9	38.8	0	-4,-5	-	-	12.78	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000167020	ENSMUSP00000132117	TRANSLATION	protein_coding	-	CCDS29046.1	1	646	0	1.344	8.3	38.8	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000024283	Wac	ENSMUST00000169010	ENSMUSP00000131750	TRANSLATION	protein_coding	stop	-	3	113	0	1.08	0	34	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000074919	ENSMUSP00000074454	TRANSLATION	protein_coding	-	CCDS70869.1	1	601	0	1.344	7.3	38.8	0	-4,-5	-	-	14.589	ALTERNATIVE:1
ENSMUSG00000024283	Wac	ENSMUST00000165572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024283	Wac	ENSMUST00000170932	ENSMUSP00000127434	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000165854	ENSMUSP00000126815	TRANSLATION	protein_coding	start/stop	-	3	295	0	1.344	0	38.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000092112	ENSMUSP00000089746	TRANSLATION	protein_coding	-	CCDS50218.1	1	543	0	1.344	5.3	38.8	0	-4,-7	-	-	13.767	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000167542	ENSMUSP00000125989	TRANSLATION	protein_coding	start/stop	-	2	212	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000170854	ENSMUSP00000131141	TRANSLATION	protein_coding	start/stop	-	5	241	0	0.594	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024283	Wac	ENSMUST00000171042	ENSMUSP00000133185	TRANSLATION	protein_coding	-	-	1	494	0	1.344	1.7	38.8	0	-4,-5	-	-	12.288	MINOR
ENSMUSG00000034006	Slc66a2	ENSMUST00000123750	ENSMUSP00000121890	TRANSLATION	protein_coding	-	CCDS50334.1	1	253	0	0	6.3	109.3	14	0,-3	-	-	8	ALTERNATIVE:1
ENSMUSG00000034006	Slc66a2	ENSMUST00000129043	ENSMUSP00000118670	TRANSLATION	protein_coding	-	CCDS50334.1	1	253	0	0	6.3	109.3	14	0,-3	-	-	8	ALTERNATIVE:1
ENSMUSG00000034006	Slc66a2	ENSMUST00000155039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034006	Slc66a2	ENSMUST00000134545	ENSMUSP00000157740	TRANSLATION	protein_coding	-	-	1	134	0	0	0.5	45.2	9	0,-3	-	-	2.154	MINOR
ENSMUSG00000034006	Slc66a2	ENSMUST00000140594	ENSMUSP00000119083	TRANSLATION	protein_coding	-	CCDS29367.1	1	271	0	0	6.3	109.3	14	0,-3	-	-	8	PRINCIPAL:3
ENSMUSG00000034006	Slc66a2	ENSMUST00000070135	ENSMUSP00000069986	TRANSLATION	protein_coding	-	CCDS50334.1	1	253	0	0	6.3	109.3	14	0,-3	-	-	8	ALTERNATIVE:1
ENSMUSG00000034006	Slc66a2	ENSMUST00000131780	ENSMUSP00000117166	TRANSLATION	protein_coding	-	CCDS29367.1	1	271	0	0	6.3	109.3	14	0,-3	-	-	8	PRINCIPAL:3
ENSMUSG00000034006	Slc66a2	ENSMUST00000157056	ENSMUSP00000115819	TRANSLATION	protein_coding	stop	-	3	149	0	0	0	45.2	12	0,-3	-	-	-1	MINOR
ENSMUSG00000034006	Slc66a2	ENSMUST00000144468	ENSMUSP00000121684	TRANSLATION	protein_coding	-	-	1	209	0	0	0	74.8	14	0,-3	-	-	3.93	MINOR
ENSMUSG00000034006	Slc66a2	ENSMUST00000091798	ENSMUSP00000089402	TRANSLATION	protein_coding	-	CCDS29367.1	5	271	0	0	6.3	109.3	14	0,-3	-	-	8	PRINCIPAL:3
ENSMUSG00000034006	Slc66a2	ENSMUST00000151677	ENSMUSP00000157569	TRANSLATION	protein_coding	-	-	1	134	0	0	0.5	45.2	9	0,-3	-	-	2.154	MINOR
ENSMUSG00000019143	Hars2	ENSMUST00000145876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019143	Hars2	ENSMUST00000131952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019143	Hars2	ENSMUST00000152954	ENSMUSP00000117231	TRANSLATION	protein_coding	-	CCDS29165.1	1	505	34	11.25	6.3	57.3	0	-2,2	-	-	20	PRINCIPAL:1
ENSMUSG00000019143	Hars2	ENSMUST00000124204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019143	Hars2	ENSMUST00000134122	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019143	Hars2	ENSMUST00000019287	ENSMUSP00000019287	TRANSLATION	protein_coding	-	CCDS84376.1	1	424	20	10.25	0.5	57.3	0	-2,2	-	-	10.002	MINOR
ENSMUSG00000019143	Hars2	ENSMUST00000155842	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049357	Brd8dc	ENSMUST00000129566	ENSMUSP00000117272	TRANSLATION	nonsense_mediated_decay	-	-	2	218	0	0.95	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049357	Brd8dc	ENSMUST00000056932	ENSMUSP00000054234	TRANSLATION	protein_coding	-	CCDS37758.1	1	273	0	1.75	0.5	77.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047466	8030462N17Rik	ENSMUST00000235641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047466	8030462N17Rik	ENSMUST00000074653	ENSMUSP00000074225	TRANSLATION	protein_coding	-	CCDS29355.1	1	399	0	0	1.5	147.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047466	8030462N17Rik	ENSMUST00000237203	ENSMUSP00000158108	TRANSLATION	protein_coding	-	CCDS29355.1	-	399	0	0	1.5	147.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046610	Oacyl	ENSMUST00000235962	ENSMUSP00000157461	TRANSLATION	protein_coding	stop	-	-	195	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000046610	Oacyl	ENSMUST00000115097	ENSMUSP00000110749	TRANSLATION	protein_coding	-	CCDS29308.1	1	685	0	0	0.5	76.8	13	1,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000046610	Oacyl	ENSMUST00000134343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046610	Oacyl	ENSMUST00000117694	ENSMUSP00000113626	TRANSLATION	protein_coding	-	-	1	612	0	0	0	76.8	13	1,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000050304	Slc25a2	ENSMUST00000239189	-	NO_TRANSLATION	transcribed_unitary_pseudogene
ENSMUSG00000050304	Slc25a2	ENSMUST00000058635	ENSMUSP00000052849	TRANSLATION	protein_coding	-	CCDS50258.1	-	265	0	0.42	1.5	167.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050304	Slc25a2	ENSMUST00000239320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042816	Gpr151	ENSMUST00000054738	ENSMUSP00000058887	TRANSLATION	protein_coding	-	CCDS29215.1	-	422	0	0.4	1.5	62.5	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024410	Rmc1	ENSMUST00000234982	ENSMUSP00000157241	TRANSLATION	protein_coding	start	-	-	121	3	0	0	89.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024410	Rmc1	ENSMUST00000234814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024410	Rmc1	ENSMUST00000153233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024410	Rmc1	ENSMUST00000126523	ENSMUSP00000157072	TRANSLATION	protein_coding	-	-	1	305	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024410	Rmc1	ENSMUST00000134046	ENSMUSP00000118783	TRANSLATION	protein_coding	start/stop	-	5	141	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024410	Rmc1	ENSMUST00000139151	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024410	Rmc1	ENSMUST00000234457	ENSMUSP00000157003	TRANSLATION	protein_coding	start	-	-	131	0	0	0	68.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024410	Rmc1	ENSMUST00000127123	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024410	Rmc1	ENSMUST00000134756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024410	Rmc1	ENSMUST00000155431	ENSMUSP00000157087	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024410	Rmc1	ENSMUST00000025276	ENSMUSP00000025276	TRANSLATION	protein_coding	-	CCDS29063.1	1	657	0	0	8.5	233.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024410	Rmc1	ENSMUST00000138866	ENSMUSP00000121414	TRANSLATION	nonsense_mediated_decay	start	-	5	134	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024413	Npc1	ENSMUST00000235105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024413	Npc1	ENSMUST00000144435	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024413	Npc1	ENSMUST00000133112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024413	Npc1	ENSMUST00000234044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024413	Npc1	ENSMUST00000025279	ENSMUSP00000025279	TRANSLATION	protein_coding	-	CCDS29064.1	1	1277	20	23.8	3.9	566.2	0	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000024413	Npc1	ENSMUST00000149211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024413	Npc1	ENSMUST00000145771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024491	Rbm27	ENSMUST00000236240	ENSMUSP00000158063	TRANSLATION	protein_coding	-	-	-	1060	4	0	1.5	55.3	0	-4,-6	-	-	10.188	MINOR
ENSMUSG00000024491	Rbm27	ENSMUST00000091920	ENSMUSP00000089540	TRANSLATION	protein_coding	-	CCDS50267.1	1	1005	4	0	6.3	55.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024491	Rbm27	ENSMUST00000237798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024491	Rbm27	ENSMUST00000046972	ENSMUSP00000041688	TRANSLATION	protein_coding	-	-	5	961	4	0	0	55.3	0	-4,-6	-	-	10	MINOR
ENSMUSG00000024491	Rbm27	ENSMUST00000237086	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024597	Slc12a2	ENSMUST00000115366	ENSMUSP00000111023	TRANSLATION	protein_coding	-	CCDS37826.1	1	1206	0	0	1.5	1142.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024597	Slc12a2	ENSMUST00000236673	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059336	Slc14a1	ENSMUST00000160639	ENSMUSP00000125367	TRANSLATION	protein_coding	-	CCDS29360.1	1	384	6	7.5	5.1	366.8	9	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000059336	Slc14a1	ENSMUST00000160292	ENSMUSP00000125114	TRANSLATION	protein_coding	-	CCDS50330.1	1	440	6	7.5	1.5	366.8	9	-4,-5	-	-	18.244	MINOR
ENSMUSG00000059336	Slc14a1	ENSMUST00000091813	ENSMUSP00000089421	TRANSLATION	protein_coding	-	CCDS29360.1	1	384	6	7.5	5.1	366.8	9	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000045876	Pcdhb8	ENSMUST00000051163	ENSMUSP00000054371	TRANSLATION	protein_coding	-	CCDS29175.1	-	779	55	3.2	1.5	453.1	0	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000045876	Pcdhb8	ENSMUST00000192867	ENSMUSP00000141814	TRANSLATION	protein_coding	stop	-	3	104	11	1.4	0	58.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000102222	Pcdhga10	ENSMUST00000193404	ENSMUSP00000141359	TRANSLATION	protein_coding	-	CCDS79632.1	1	930	49	1	0.5	552.8	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000034774	Dsg1c	ENSMUST00000054128	ENSMUSP00000054799	TRANSLATION	protein_coding	-	CCDS29079.1	1	911	27	8.265	0.5	185.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024576	Csnk1a1	ENSMUST00000165381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024576	Csnk1a1	ENSMUST00000170482	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024576	Csnk1a1	ENSMUST00000163205	ENSMUSP00000127144	TRANSLATION	protein_coding	-	-	1	336	20	9.33	16	96.4	0	-4,-6	-	-	20.528	MINOR
ENSMUSG00000024576	Csnk1a1	ENSMUST00000167187	ENSMUSP00000127463	TRANSLATION	protein_coding	-	-	5	353	20	9.45	17.3	85.8	0	-4,-6	-	-	20.404	ALTERNATIVE:1
ENSMUSG00000024576	Csnk1a1	ENSMUST00000165123	ENSMUSP00000128871	TRANSLATION	protein_coding	-	CCDS37838.1	1	325	20	9	15	96.4	0	-4,-6	-	-	19.64	MINOR
ENSMUSG00000024576	Csnk1a1	ENSMUST00000165721	ENSMUSP00000132083	TRANSLATION	protein_coding	-	-	1	337	20	9.33	16	96.4	0	-4,-6	-	-	20.528	MINOR
ENSMUSG00000024576	Csnk1a1	ENSMUST00000170862	ENSMUSP00000127265	TRANSLATION	protein_coding	-	-	5	365	20	9.78	18.5	85.6	0	-4,-6	-	-	21.328	PRINCIPAL:5
ENSMUSG00000024576	Csnk1a1	ENSMUST00000164253	ENSMUSP00000129295	TRANSLATION	protein_coding	start	-	3	159	0	4.396	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024576	Csnk1a1	ENSMUST00000115246	ENSMUSP00000110901	TRANSLATION	protein_coding	-	-	5	334	20	9.066	1.2	96.4	0	-4,-6	-	-	16.616	MINOR
ENSMUSG00000024576	Csnk1a1	ENSMUST00000166990	ENSMUSP00000131687	TRANSLATION	protein_coding	-	-	5	374	20	9.33	0	96.4	0	-4,-6	-	-	17.1	MINOR
ENSMUSG00000024561	Mbd1	ENSMUST00000097530	ENSMUSP00000095137	TRANSLATION	protein_coding	-	CCDS50321.1	1	588	20	3.92	0.5	141.6	0	-4,-5	-	-	7.782	MINOR
ENSMUSG00000024561	Mbd1	ENSMUST00000224047	ENSMUSP00000153428	TRANSLATION	protein_coding	-	-	-	644	28	4.92	0.5	189.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024561	Mbd1	ENSMUST00000239157	ENSMUSP00000159055	TRANSLATION	protein_coding	-	-	-	613	20	3.92	0	141.6	0	-4,-5	-	-	7.782	MINOR
ENSMUSG00000024561	Mbd1	ENSMUST00000237568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024561	Mbd1	ENSMUST00000224907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024561	Mbd1	ENSMUST00000224332	ENSMUSP00000153085	TRANSLATION	protein_coding	start	-	-	467	20	1.5	0	76.5	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000024561	Mbd1	ENSMUST00000224159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032845	Alpk2	ENSMUST00000182629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032845	Alpk2	ENSMUST00000141250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032845	Alpk2	ENSMUST00000035548	ENSMUSP00000048752	TRANSLATION	protein_coding	-	CCDS50310.1	5	2144	4	3.7	0.5	197.5	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000032845	Alpk2	ENSMUST00000235298	ENSMUSP00000157962	TRANSLATION	protein_coding	start	-	-	300	3	1.46	0	59.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024382	Ercc3	ENSMUST00000025241	ENSMUSP00000025241	TRANSLATION	protein_coding	-	CCDS29118.1	1	783	12	13.83	8.3	549.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024382	Ercc3	ENSMUST00000142213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024382	Ercc3	ENSMUST00000129023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096597	Gm21886	ENSMUST00000178391	ENSMUSP00000136060	TRANSLATION	protein_coding	start	-	5	214	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000079415	Cntf	ENSMUST00000112933	ENSMUSP00000108555	TRANSLATION	protein_coding	-	CCDS29637.1	1	198	0	2	7.5	351.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000090369	4933411K16Rik	ENSMUST00000164518	ENSMUSP00000131279	TRANSLATION	protein_coding	-	CCDS50438.1	-	304	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000037263	Aldh3b3	ENSMUST00000189124	ENSMUSP00000140893	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	1.12	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037263	Aldh3b3	ENSMUST00000025794	ENSMUSP00000025794	TRANSLATION	protein_coding	start	-	1	87	0	1.42	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037263	Aldh3b3	ENSMUST00000179433	ENSMUSP00000136334	TRANSLATION	protein_coding	-	CCDS57128.1	5	479	28	9.918	1.5	291.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000118491	Zfp91	ENSMUST00000142247	ENSMUSP00000124424	TRANSLATION	nonsense_mediated_decay,RT	-	-	5	529	20	3.45	0	55.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000024885	Aldh3b1	ENSMUST00000051803	ENSMUSP00000056276	TRANSLATION	protein_coding	-	CCDS29403.1	1	468	28	8.3	7.5	289.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024885	Aldh3b1	ENSMUST00000237391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042401	Crtac1	ENSMUST00000238290	ENSMUSP00000158623	TRANSLATION	protein_coding	-	-	-	652	19	0.98	0	43.7	0	2,-2	-	-	18	MINOR
ENSMUSG00000042401	Crtac1	ENSMUST00000238182	ENSMUSP00000158328	TRANSLATION	protein_coding	start	-	-	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042401	Crtac1	ENSMUST00000048630	ENSMUSP00000044858	TRANSLATION	protein_coding	-	CCDS29828.1	1	646	19	0.98	5.1	43.7	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000015176	Nolc1	ENSMUST00000165017	ENSMUSP00000128331	TRANSLATION	protein_coding	-	CCDS38006.1	1	702	0	0	0.5	100.1	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000015176	Nolc1	ENSMUST00000225758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015176	Nolc1	ENSMUST00000223728	ENSMUSP00000153329	TRANSLATION	protein_coding	-	-	-	700	0	0	0.5	100.1	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000015176	Nolc1	ENSMUST00000223683	ENSMUSP00000153600	TRANSLATION	protein_coding	start	-	-	702	0	0	0.5	100.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015176	Nolc1	ENSMUST00000224434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015176	Nolc1	ENSMUST00000225780	ENSMUSP00000153545	TRANSLATION	protein_coding	-	-	-	701	0	0	0.5	100.1	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000015176	Nolc1	ENSMUST00000235620	ENSMUSP00000157687	TRANSLATION	protein_coding	-	CCDS38006.1	-	702	0	0	0.5	100.1	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000015176	Nolc1	ENSMUST00000223741	ENSMUSP00000152921	TRANSLATION	protein_coding	stop	-	-	197	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000015176	Nolc1	ENSMUST00000224490	ENSMUSP00000153641	TRANSLATION	nonsense_mediated_decay	start	-	-	36	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024687	Osbp	ENSMUST00000025590	ENSMUSP00000025590	TRANSLATION	protein_coding	-	CCDS37925.1	5	805	0	6.3	1.5	546.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037418	Best1	ENSMUST00000235983	ENSMUSP00000157419	TRANSLATION	protein_coding	stop	-	-	420	0	7.7	0	355.4	3	-4,-2	-	-	-1	MINOR
ENSMUSG00000037418	Best1	ENSMUST00000144273	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037418	Best1	ENSMUST00000117346	ENSMUSP00000113053	TRANSLATION	protein_coding	-	CCDS29568.1	5	551	0	7.7	0.5	355.4	3	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000071660	Ttc9c	ENSMUST00000148090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071660	Ttc9c	ENSMUST00000153281	ENSMUSP00000120656	TRANSLATION	protein_coding	-	-	1	110	0	0.96	0	0	0	-4,-5	-	-	3.27	MINOR
ENSMUSG00000071660	Ttc9c	ENSMUST00000096751	ENSMUSP00000094513	TRANSLATION	protein_coding	-	CCDS29549.1	1	171	0	1.76	8.8	24.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071660	Ttc9c	ENSMUST00000088092	ENSMUSP00000085413	TRANSLATION	protein_coding	-	CCDS29549.1	1	171	0	1.76	8.8	24.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024902	Mrpl11	ENSMUST00000025836	ENSMUSP00000025836	TRANSLATION	protein_coding	-	CCDS29444.1	1	192	0	5.66	7.5	154.3	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000024902	Mrpl11	ENSMUST00000237974	ENSMUSP00000157652	TRANSLATION	protein_coding	stop	-	-	150	0	4.41	0	140.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024902	Mrpl11	ENSMUST00000235229	ENSMUSP00000157440	TRANSLATION	protein_coding	stop	-	-	114	0	3.25	0	94.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024902	Mrpl11	ENSMUST00000236354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024902	Mrpl11	ENSMUST00000236917	ENSMUSP00000157720	TRANSLATION	protein_coding	-	-	-	158	0	4.58	0	154.3	0	-4,-2	-	-	9.84	MINOR
ENSMUSG00000091014	Gm5244	ENSMUST00000189517	ENSMUSP00000157906	TRANSLATION	protein_coding	-	-	-	113	0	1	2.5	73.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024869	Gm49405	ENSMUST00000155405	ENSMUSP00000119218	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	210	4	1.76	3.9	39	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000056209	Npm3	ENSMUST00000144165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056209	Npm3	ENSMUST00000070215	ENSMUSP00000069578	TRANSLATION	protein_coding	-	CCDS29865.1	1	175	0	2.6	1.7	122.1	0	-2,1	-	-	12	PRINCIPAL:1
ENSMUSG00000016498	Pdcd1lg2	ENSMUST00000235164	ENSMUSP00000158422	TRANSLATION	protein_coding	-	CCDS29736.1	-	247	0	2.6	0.5	24.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000016498	Pdcd1lg2	ENSMUST00000112576	ENSMUSP00000108195	TRANSLATION	protein_coding	-	CCDS29736.1	1	247	0	2.6	0.5	24.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000025016	Tm9sf3	ENSMUST00000237871	ENSMUSP00000158318	TRANSLATION	protein_coding	-	CCDS29808.1	-	587	0	0	6.3	531.8	10	3,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000025016	Tm9sf3	ENSMUST00000025989	ENSMUSP00000025989	TRANSLATION	protein_coding	-	-	1	584	0	0	0	531.8	10	3,-1	-	-	6	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000238013	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036748	Cuedc2	ENSMUST00000051234	ENSMUSP00000053469	TRANSLATION	protein_coding	-	CCDS29876.1	5	284	0	0	2.7	21.5	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000236768	ENSMUSP00000158517	TRANSLATION	protein_coding	stop	-	-	106	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000237382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036748	Cuedc2	ENSMUST00000238062	ENSMUSP00000157629	TRANSLATION	protein_coding	stop	-	-	170	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000236046	ENSMUSP00000157580	TRANSLATION	protein_coding	-	CCDS29876.1	-	284	0	0	2.7	21.5	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000236651	ENSMUSP00000158251	TRANSLATION	protein_coding	stop	-	-	23	0	0	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000236980	ENSMUSP00000158362	TRANSLATION	protein_coding	-	-	-	266	0	0	1.5	21.5	0	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000236066	ENSMUSP00000158321	TRANSLATION	protein_coding	stop	-	-	72	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000236061	ENSMUSP00000157840	TRANSLATION	protein_coding	-	CCDS29876.1	-	284	0	0	2.7	21.5	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000235977	ENSMUSP00000158178	TRANSLATION	protein_coding	-	-	-	273	0	0	0.5	21.5	0	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000236236	ENSMUSP00000158548	TRANSLATION	protein_coding	stop	-	-	195	0	0	0	21.5	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000036748	Cuedc2	ENSMUST00000167861	ENSMUSP00000129589	TRANSLATION	protein_coding	-	CCDS29876.1	5	284	0	0	2.7	21.5	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036748	Cuedc2	ENSMUST00000235485	ENSMUSP00000158425	TRANSLATION	protein_coding	-	CCDS29876.1	-	284	0	0	2.7	21.5	0	-3,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000110949	Nudt8	ENSMUST00000025802	ENSMUSP00000025802	TRANSLATION	protein_coding	-	CCDS29408.1	1	210	4	1.76	3.9	39	0	-4,-2	-	-	17	PRINCIPAL:1
ENSMUSG00000110949	Nudt8	ENSMUST00000122924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024694	Keg1	ENSMUST00000152017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024694	Keg1	ENSMUST00000154822	ENSMUSP00000119879	TRANSLATION	protein_coding	stop	-	3	221	0	0	0	289.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024694	Keg1	ENSMUST00000123407	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024694	Keg1	ENSMUST00000147335	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024694	Keg1	ENSMUST00000025598	ENSMUSP00000025598	TRANSLATION	protein_coding	-	CCDS29636.1	1	295	0	0	1.5	440.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024694	Keg1	ENSMUST00000138545	ENSMUSP00000116555	TRANSLATION	protein_coding	stop	-	2	227	0	0	0	300.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024694	Keg1	ENSMUST00000128987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044390	Tigd3	ENSMUST00000236767	ENSMUSP00000157880	TRANSLATION	protein_coding	-	CCDS29483.1	-	470	0	0	3.9	133.9	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000044390	Tigd3	ENSMUST00000055911	ENSMUSP00000059302	TRANSLATION	protein_coding	-	CCDS29483.1	1	470	0	0	3.9	133.9	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000024728	Ms4a19	ENSMUST00000181284	ENSMUSP00000137829	TRANSLATION	protein_coding	-	-	3	70	0	0	0	0	2	0,-4	-	-	0	MINOR
ENSMUSG00000024728	Ms4a19	ENSMUST00000180678	ENSMUSP00000137968	TRANSLATION	protein_coding	-	-	1	70	0	0	0	0	2	0,-4	-	-	0	MINOR
ENSMUSG00000024728	Ms4a19	ENSMUST00000181567	ENSMUSP00000137806	TRANSLATION	protein_coding	-	-	1	70	0	0	0	0	2	0,-4	-	-	0	MINOR
ENSMUSG00000024728	Ms4a19	ENSMUST00000078770	ENSMUSP00000077828	TRANSLATION	protein_coding	-	CCDS50394.1	1	111	0	0	0.5	29.1	2	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000047787	Flrt1	ENSMUST00000113383	ENSMUSP00000109010	TRANSLATION	protein_coding	-	CCDS29519.1	1	674	0	0.8	5.1	151.9	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000048720	Tbc1d12	ENSMUST00000037302	ENSMUSP00000037884	TRANSLATION	protein_coding	-	CCDS37975.1	1	698	0	7.075	0.5	167.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048720	Tbc1d12	ENSMUST00000235558	ENSMUSP00000157901	TRANSLATION	protein_coding	-	-	-	623	0	5.475	0.5	158.2	0	-4,-5	-	-	8.244	MINOR
ENSMUSG00000024742	Fen1	ENSMUST00000156291	ENSMUSP00000117246	TRANSLATION	protein_coding	-	CCDS29573.1	2	380	7	1	14.2	233.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024742	Fen1	ENSMUST00000025651	ENSMUSP00000025651	TRANSLATION	protein_coding	-	CCDS29573.1	1	380	7	1	14.2	233.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024742	Fen1	ENSMUST00000142241	ENSMUSP00000119221	TRANSLATION	protein_coding	-	CCDS29573.1	1	380	7	1	14.2	233.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024742	Fen1	ENSMUST00000116542	ENSMUSP00000112241	TRANSLATION	protein_coding	-	CCDS29573.1	1	380	7	1	14.2	233.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025200	Cwf19l1	ENSMUST00000237067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025200	Cwf19l1	ENSMUST00000236156	ENSMUSP00000158054	TRANSLATION	nonsense_mediated_decay	-	-	-	113	2	0.513	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025200	Cwf19l1	ENSMUST00000026218	ENSMUSP00000026218	TRANSLATION	protein_coding	-	CCDS37995.1	1	537	6	2.712	7.5	177.9	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000025200	Cwf19l1	ENSMUST00000237939	ENSMUSP00000157760	TRANSLATION	nonsense_mediated_decay	stop	-	-	296	2	2.712	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025200	Cwf19l1	ENSMUST00000237415	ENSMUSP00000158411	TRANSLATION	nonsense_mediated_decay	-	-	-	113	2	0.513	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025200	Cwf19l1	ENSMUST00000235288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025200	Cwf19l1	ENSMUST00000237250	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025200	Cwf19l1	ENSMUST00000236626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061451	Tmem151a	ENSMUST00000143677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061451	Tmem151a	ENSMUST00000140389	ENSMUSP00000117156	TRANSLATION	protein_coding	-	-	3	95	4	0	0	0	0	-4,-5	-	-	4	MINOR
ENSMUSG00000061451	Tmem151a	ENSMUST00000151413	ENSMUSP00000121084	TRANSLATION	protein_coding	stop	-	3	72	5	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000061451	Tmem151a	ENSMUST00000077066	ENSMUSP00000076321	TRANSLATION	protein_coding	-	CCDS29449.1	1	468	4	0	7.5	584.2	0	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000061451	Tmem151a	ENSMUST00000136372	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024979	Tectb	ENSMUST00000123763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024979	Tectb	ENSMUST00000120936	ENSMUSP00000113805	TRANSLATION	protein_coding	-	-	5	339	0	2.293	1.2	117.4	0	4,-1	-	-	12.069	MINOR
ENSMUSG00000024979	Tectb	ENSMUST00000148123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024979	Tectb	ENSMUST00000025936	ENSMUSP00000025936	TRANSLATION	protein_coding	-	CCDS29907.1	1	329	0	2.26	7.5	117.8	0	4,-1	-	-	14.916	PRINCIPAL:1
ENSMUSG00000024979	Tectb	ENSMUST00000154886	ENSMUSP00000121767	TRANSLATION	protein_coding	stop	-	3	195	0	0.68	0	31.6	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024979	Tectb	ENSMUST00000124545	ENSMUSP00000117645	TRANSLATION	protein_coding	start/stop	-	3	177	0	1.58	0	85.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024735	Prpf19	ENSMUST00000187751	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024735	Prpf19	ENSMUST00000190275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024735	Prpf19	ENSMUST00000179297	ENSMUSP00000136858	TRANSLATION	protein_coding	-	CCDS57135.1	1	523	0	12.83	1.5	225.3	0	-4,-5	-	-	9.688	MINOR
ENSMUSG00000024735	Prpf19	ENSMUST00000025642	ENSMUSP00000025642	TRANSLATION	protein_coding	-	CCDS79687.1	1	504	0	13.08	17.3	257.6	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024735	Prpf19	ENSMUST00000186416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024735	Prpf19	ENSMUST00000178868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024735	Prpf19	ENSMUST00000191092	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024735	Prpf19	ENSMUST00000191552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024957	Kcnk4	ENSMUST00000025908	ENSMUSP00000025908	TRANSLATION	protein_coding	-	CCDS29511.1	1	398	0	5.83	1.5	142.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024957	Kcnk4	ENSMUST00000237766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024957	Kcnk4	ENSMUST00000235836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024957	Kcnk4	ENSMUST00000235248	ENSMUSP00000157941	TRANSLATION	protein_coding	stop	-	-	99	0	2.5	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024957	Kcnk4	ENSMUST00000236443	ENSMUSP00000157625	TRANSLATION	protein_coding	start	-	-	64	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024957	Kcnk4	ENSMUST00000237484	ENSMUSP00000157596	TRANSLATION	nonsense_mediated_decay	-	-	-	67	0	1.5	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024957	Kcnk4	ENSMUST00000235279	ENSMUSP00000157860	TRANSLATION	nonsense_mediated_decay	start	-	-	81	0	1.5	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024816	Frmd8	ENSMUST00000145026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024816	Frmd8	ENSMUST00000155227	ENSMUSP00000116453	TRANSLATION	protein_coding	stop	-	5	201	0	2.146	0	31.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024816	Frmd8	ENSMUST00000025728	ENSMUSP00000025728	TRANSLATION	protein_coding	-	CCDS29481.1	1	466	0	2.878	3.9	48.2	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000024816	Frmd8	ENSMUST00000133729	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024673	Ms4a1	ENSMUST00000185851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024673	Ms4a1	ENSMUST00000169159	ENSMUSP00000126422	TRANSLATION	protein_coding	-	CCDS37923.1	1	291	0	0	0.5	154.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024673	Ms4a1	ENSMUST00000187379	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024661	Fth1	ENSMUST00000236195	ENSMUSP00000158177	TRANSLATION	protein_coding	stop	-	-	59	1	1.5	0	37.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024661	Fth1	ENSMUST00000236403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024661	Fth1	ENSMUST00000237316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024661	Fth1	ENSMUST00000235747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024661	Fth1	ENSMUST00000025563	ENSMUSP00000025563	TRANSLATION	protein_coding	-	CCDS29567.1	1	182	18	5.08	13.8	132.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024661	Fth1	ENSMUST00000235129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024661	Fth1	ENSMUST00000235407	ENSMUSP00000157595	TRANSLATION	protein_coding	stop	-	-	116	16	3.16	0	61.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024661	Fth1	ENSMUST00000235196	ENSMUSP00000158539	TRANSLATION	protein_coding	-	CCDS29567.1	-	182	18	5.08	13.8	132.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024661	Fth1	ENSMUST00000237465	ENSMUSP00000157992	TRANSLATION	protein_coding	-	-	-	136	15	3.646	0	107.1	0	-4,-7	-	-	11.616	MINOR
ENSMUSG00000067889	Sptbn2	ENSMUST00000008991	ENSMUSP00000008991	TRANSLATION	protein_coding	-	CCDS29434.1	1	2388	0	26.1	6.3	1214.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000067889	Sptbn2	ENSMUST00000238976	ENSMUSP00000159038	TRANSLATION	protein_coding	stop	-	-	110	0	1	0	36.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067889	Sptbn2	ENSMUST00000238162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067889	Sptbn2	ENSMUST00000237694	ENSMUSP00000158522	TRANSLATION	protein_coding	stop	-	-	175	0	2.5	0	85.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024875	Yif1a	ENSMUST00000235773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024875	Yif1a	ENSMUST00000237025	ENSMUSP00000157411	TRANSLATION	protein_coding	-	-	-	241	0	0	3.6	183.7	7	-4,-7	-	-	1.608	MINOR
ENSMUSG00000024875	Yif1a	ENSMUST00000237603	ENSMUSP00000157958	TRANSLATION	nonsense_mediated_decay	-	-	-	130	0	0	0	79.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024875	Yif1a	ENSMUST00000025811	ENSMUSP00000025811	TRANSLATION	protein_coding	-	CCDS29450.1	1	293	0	0	7.5	276.9	8	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000024875	Yif1a	ENSMUST00000236687	ENSMUSP00000157857	TRANSLATION	protein_coding	-	-	-	284	0	0	0	276.9	8	-4,-6	-	-	6	MINOR
ENSMUSG00000024875	Yif1a	ENSMUST00000238093	ENSMUSP00000157938	TRANSLATION	protein_coding	-	-	-	240	0	0	0	225.1	5	-4,-7	-	-	2.892	MINOR
ENSMUSG00000001750	Tcirg1	ENSMUST00000159824	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000122885	ENSMUSP00000114768	TRANSLATION	nonsense_mediated_decay	start	-	5	91	0	2.5	0	143.8	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000001750	Tcirg1	ENSMUST00000126070	ENSMUSP00000120531	TRANSLATION	protein_coding	-	CCDS29401.1	1	834	0	12.97	1.5	946.9	6	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000001750	Tcirg1	ENSMUST00000135070	ENSMUSP00000121241	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0.8	0	0	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000001750	Tcirg1	ENSMUST00000145791	ENSMUSP00000122474	TRANSLATION	protein_coding	-	CCDS29401.1	1	834	0	12.97	1.5	946.9	6	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000001750	Tcirg1	ENSMUST00000126643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000127308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000132164	ENSMUSP00000120968	TRANSLATION	nonsense_mediated_decay	start	-	5	191	0	2.714	0	158.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001750	Tcirg1	ENSMUST00000125792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000131327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000001801	ENSMUSP00000001801	TRANSLATION	protein_coding	-	CCDS29401.1	1	834	0	12.97	1.5	946.9	6	-1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000001750	Tcirg1	ENSMUST00000134698	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000162688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001750	Tcirg1	ENSMUST00000236590	ENSMUSP00000157575	TRANSLATION	protein_coding	stop	-	-	65	0	1.88	0	41.1	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000060613	Cyp2c70	ENSMUST00000051846	ENSMUSP00000060584	TRANSLATION	protein_coding	-	CCDS37976.1	1	489	33	10.25	1.5	523.6	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000060613	Cyp2c70	ENSMUST00000164351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060613	Cyp2c70	ENSMUST00000165102	ENSMUSP00000128691	TRANSLATION	nonsense_mediated_decay	-	-	3	72	0	1.4	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000060613	Cyp2c70	ENSMUST00000171604	ENSMUSP00000129063	TRANSLATION	nonsense_mediated_decay	-	-	3	76	0	1	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000037451	Slc22a20	ENSMUST00000237046	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037451	Slc22a20	ENSMUST00000041827	ENSMUSP00000049473	TRANSLATION	protein_coding	-	CCDS29486.1	1	556	0	3.74	2.7	89.8	0	-1,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000048572	Tmem252	ENSMUST00000057243	ENSMUSP00000060863	TRANSLATION	protein_coding	-	CCDS29713.1	1	183	0	0	0.5	231.5	0	-1,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025035	Arl3	ENSMUST00000235540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025035	Arl3	ENSMUST00000235489	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025035	Arl3	ENSMUST00000238076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025035	Arl3	ENSMUST00000236067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025035	Arl3	ENSMUST00000236255	ENSMUSP00000158118	TRANSLATION	protein_coding	-	-	-	180	21	3.9	0.5	231.2	0	-4,-7	-	-	17.226	MINOR
ENSMUSG00000025035	Arl3	ENSMUST00000026009	ENSMUSP00000026009	TRANSLATION	protein_coding	-	CCDS38010.1	1	182	21	4	17.5	240.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000056201	Cfl1	ENSMUST00000236645	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056201	Cfl1	ENSMUST00000209469	ENSMUSP00000147514	TRANSLATION	protein_coding	-	CCDS84409.1	1	166	0	2.75	13.7	107.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000056201	Cfl1	ENSMUST00000237122	ENSMUSP00000157562	TRANSLATION	protein_coding	-	-	-	178	0	1.75	0	91.5	0	-4,-5	-	-	8.862	MINOR
ENSMUSG00000056201	Cfl1	ENSMUST00000116560	ENSMUSP00000112259	TRANSLATION	protein_coding	-	-	5	227	0	2.75	0	107.4	0	-4,-5	-	-	12	MINOR
ENSMUSG00000059326	Csf2ra	ENSMUST00000235172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059326	Csf2ra	ENSMUST00000237386	ENSMUSP00000158457	TRANSLATION	protein_coding	-	CCDS29946.1	-	388	0	5.928	0.5	64.6	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059326	Csf2ra	ENSMUST00000235483	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059326	Csf2ra	ENSMUST00000076046	ENSMUSP00000075423	TRANSLATION	protein_coding	-	CCDS29946.1	1	388	0	5.928	0.5	64.6	1	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000059326	Csf2ra	ENSMUST00000235987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059326	Csf2ra	ENSMUST00000237877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059326	Csf2ra	ENSMUST00000237286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059326	Csf2ra	ENSMUST00000236872	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024922	Ovol1	ENSMUST00000238060	ENSMUSP00000158183	TRANSLATION	protein_coding	stop	-	-	42	0	0.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024922	Ovol1	ENSMUST00000025861	ENSMUSP00000025861	TRANSLATION	protein_coding	-	CCDS29469.1	1	267	14	1.9	8.8	61.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000025229	Pitx3	ENSMUST00000172971	ENSMUSP00000134563	TRANSLATION	protein_coding	stop	-	5	90	0	1.14	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025229	Pitx3	ENSMUST00000172980	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025229	Pitx3	ENSMUST00000026259	ENSMUSP00000026259	TRANSLATION	protein_coding	-	CCDS29872.1	1	302	0	1.64	7.5	113.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025195	Dnmbp	ENSMUST00000212592	ENSMUSP00000148421	TRANSLATION	protein_coding	-	CCDS84442.1	1	823	0	7.364	1.5	323.3	0	-3,-6	-	-	3.678	MINOR
ENSMUSG00000025195	Dnmbp	ENSMUST00000026209	ENSMUSP00000026209	TRANSLATION	protein_coding	-	CCDS29839.1	2	1580	0	8.458	0.5	456.2	0	-4,-7	-	-	11.784	PRINCIPAL:2
ENSMUSG00000025195	Dnmbp	ENSMUST00000212032	ENSMUSP00000148708	TRANSLATION	protein_coding	-	-	5	1576	0	8.524	1.5	457.6	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025195	Dnmbp	ENSMUST00000212396	ENSMUSP00000148582	TRANSLATION	protein_coding	-	CCDS29839.1	5	1580	0	8.458	0.5	456.2	0	-4,-7	-	-	11.784	PRINCIPAL:2
ENSMUSG00000025195	Dnmbp	ENSMUST00000212157	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025195	Dnmbp	ENSMUST00000212048	ENSMUSP00000148546	TRANSLATION	protein_coding	-	-	5	1264	0	7.364	0.5	323.3	0	-4,-1	-	-	3.678	MINOR
ENSMUSG00000063777	Olfr1469	ENSMUST00000077538	ENSMUSP00000076741	TRANSLATION	protein_coding	-	CCDS29658.1	-	309	0	0	4	160.3	6	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000063777	Olfr1469	ENSMUST00000216910	ENSMUSP00000150006	TRANSLATION	protein_coding	-	CCDS29658.1	5	309	0	0	4	160.3	6	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000109328	Olfr1438-ps1	ENSMUST00000208398	ENSMUSP00000146531	TRANSLATION	protein_coding	-	-	5	319	0	0	3.4	179	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000024963	Dnajc4	ENSMUST00000235481	ENSMUSP00000157797	TRANSLATION	nonsense_mediated_decay	-	-	-	88	0	0	0	0	0	-3,-2	-	-	-1	MINOR
ENSMUSG00000024963	Dnajc4	ENSMUST00000235444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024963	Dnajc4	ENSMUST00000179118	ENSMUSP00000136062	TRANSLATION	protein_coding	-	CCDS50374.1	1	244	0	2.515	1.5	75.4	1	-3,0	-	-	12	PRINCIPAL:2
ENSMUSG00000024963	Dnajc4	ENSMUST00000025915	ENSMUSP00000025915	TRANSLATION	protein_coding	-	-	1	261	0	2.515	1.5	75.4	1	-2,-4	-	-	12	ALTERNATIVE:2
ENSMUSG00000024963	Dnajc4	ENSMUST00000236113	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000080268	Brms1	ENSMUST00000237117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080268	Brms1	ENSMUST00000116567	ENSMUSP00000112266	TRANSLATION	protein_coding	-	CCDS50355.1	1	246	0	2.13	7.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000080268	Brms1	ENSMUST00000236707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000080268	Brms1	ENSMUST00000235918	ENSMUSP00000158469	TRANSLATION	protein_coding	stop	-	-	83	0	1.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000080268	Brms1	ENSMUST00000236320	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094986	Olfr1454	ENSMUST00000217568	ENSMUSP00000148859	TRANSLATION	protein_coding	-	CCDS29649.1	5	307	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094986	Olfr1454	ENSMUST00000213806	ENSMUSP00000150001	TRANSLATION	protein_coding	-	CCDS29649.1	5	307	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094986	Olfr1454	ENSMUST00000073732	ENSMUSP00000073409	TRANSLATION	protein_coding	-	CCDS29649.1	-	307	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000094986	Olfr1454	ENSMUST00000214695	ENSMUSP00000149503	TRANSLATION	protein_coding	-	CCDS29649.1	5	307	0	0	1.5	171.1	5	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000060675	Plaat3	ENSMUST00000141887	ENSMUSP00000123524	TRANSLATION	protein_coding	stop	-	5	99	0	2	0	93.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060675	Plaat3	ENSMUST00000025925	ENSMUSP00000025925	TRANSLATION	protein_coding	-	CCDS29528.1	1	162	0	2.75	6.5	136.2	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060675	Plaat3	ENSMUST00000136756	ENSMUSP00000115151	TRANSLATION	protein_coding	-	CCDS29528.1	1	162	0	2.75	6.5	136.2	1	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000060675	Plaat3	ENSMUST00000136465	ENSMUSP00000119403	TRANSLATION	protein_coding	-	-	1	168	0	2.75	0	136.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025196	Cpn1	ENSMUST00000131882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025196	Cpn1	ENSMUST00000026210	ENSMUSP00000026210	TRANSLATION	protein_coding	-	CCDS29840.1	1	457	8	9	1.5	321.4	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000054200	Ffar4	ENSMUST00000067098	ENSMUSP00000063660	TRANSLATION	protein_coding	-	CCDS29783.1	1	361	0	1.54	6.3	131.2	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000036192	Rorb	ENSMUST00000112832	ENSMUSP00000108451	TRANSLATION	protein_coding	-	CCDS37932.1	1	459	24	7.93	13.7	199	0	-4,-5	-	-	21.58	PRINCIPAL:1
ENSMUSG00000036192	Rorb	ENSMUST00000112828	ENSMUSP00000108447	TRANSLATION	protein_coding	-	CCDS79697.1	1	385	16	6.18	0.5	85.7	0	-4,-7	-	-	2.748	MINOR
ENSMUSG00000036192	Rorb	ENSMUST00000147907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036192	Rorb	ENSMUST00000149635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036192	Rorb	ENSMUST00000040153	ENSMUSP00000047597	TRANSLATION	protein_coding	-	CCDS37933.1	1	470	24	8.14	2.7	199	0	-4,-5	-	-	18.536	MINOR
ENSMUSG00000045664	Cdc42ep2	ENSMUST00000055458	ENSMUSP00000059883	TRANSLATION	protein_coding	-	CCDS29484.1	1	214	0	0	3.9	115.5	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000062199	Olfr1465	ENSMUST00000207340	ENSMUSP00000146645	TRANSLATION	protein_coding	-	CCDS29655.1	5	307	0	0	1.5	158.5	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062199	Olfr1465	ENSMUST00000080142	ENSMUSP00000079039	TRANSLATION	protein_coding	-	CCDS29655.1	-	307	0	0	1.5	158.5	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034820	Cpsf7	ENSMUST00000236206	ENSMUSP00000158553	TRANSLATION	nonsense_mediated_decay	-	-	-	101	0	1.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034820	Cpsf7	ENSMUST00000237321	ENSMUSP00000157834	TRANSLATION	protein_coding	-	CCDS29579.1	-	471	0	4.55	7.5	26.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034820	Cpsf7	ENSMUST00000236154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034820	Cpsf7	ENSMUST00000238102	ENSMUSP00000158218	TRANSLATION	nonsense_mediated_decay	start	-	-	67	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034820	Cpsf7	ENSMUST00000038379	ENSMUSP00000038958	TRANSLATION	protein_coding	-	CCDS29579.1	1	471	0	4.55	7.5	26.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034820	Cpsf7	ENSMUST00000235162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034820	Cpsf7	ENSMUST00000235674	ENSMUSP00000157799	TRANSLATION	protein_coding	stop	-	-	150	0	3.55	0	23.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034820	Cpsf7	ENSMUST00000236706	ENSMUSP00000158164	TRANSLATION	nonsense_mediated_decay	start	-	-	71	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000237268	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054611	Kdm2a	ENSMUST00000175777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054611	Kdm2a	ENSMUST00000176483	ENSMUSP00000140253	TRANSLATION	protein_coding	-	-	1	35	0	0.5	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000176653	ENSMUSP00000135745	TRANSLATION	protein_coding	stop	-	3	292	16	3.75	0	129.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000175978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054611	Kdm2a	ENSMUST00000116571	ENSMUSP00000139651	TRANSLATION	protein_coding	-	-	1	494	14	10.21	0	24.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000047898	ENSMUSP00000047683	TRANSLATION	protein_coding	-	CCDS37886.1	1	1161	30	18.71	8.8	192.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054611	Kdm2a	ENSMUST00000175959	ENSMUSP00000135689	TRANSLATION	protein_coding	start/stop	-	3	246	11	5.49	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000176497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054611	Kdm2a	ENSMUST00000175682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054611	Kdm2a	ENSMUST00000176495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054611	Kdm2a	ENSMUST00000176532	ENSMUSP00000135418	TRANSLATION	nonsense_mediated_decay	start	-	3	84	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054611	Kdm2a	ENSMUST00000075856	ENSMUSP00000076698	TRANSLATION	protein_coding	-	CCDS37886.1	5	1161	30	18.71	8.8	192.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000054611	Kdm2a	ENSMUST00000235335	ENSMUSP00000157399	TRANSLATION	nonsense_mediated_decay	start	-	-	29	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096708	Olfr1475	ENSMUST00000080801	ENSMUSP00000079616	TRANSLATION	protein_coding	-	CCDS29662.1	-	314	0	0.3	1.5	175.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000043531	Sorcs1	ENSMUST00000164039	ENSMUSP00000132615	TRANSLATION	protein_coding	-	-	5	1168	0	10.005	5.1	510.8	1	0,-3	-	-	12.888	MINOR
ENSMUSG00000043531	Sorcs1	ENSMUST00000211008	ENSMUSP00000147456	TRANSLATION	protein_coding	-	-	1	1179	0	10.335	6.3	510.8	1	0,-3	-	-	14	ALTERNATIVE:1
ENSMUSG00000043531	Sorcs1	ENSMUST00000209783	ENSMUSP00000148254	TRANSLATION	protein_coding	-	CCDS84451.1	1	1148	0	10.335	0.5	510.8	1	0,-3	-	-	12	MINOR
ENSMUSG00000043531	Sorcs1	ENSMUST00000111756	ENSMUSP00000107386	TRANSLATION	protein_coding	-	-	5	1179	0	10.005	6.3	510.8	1	0,-3	-	-	13.34	ALTERNATIVE:1
ENSMUSG00000043531	Sorcs1	ENSMUST00000209413	ENSMUSP00000147463	TRANSLATION	protein_coding	-	CCDS84452.1	1	1192	0	10.335	1.5	510.8	1	0,-3	-	-	12.188	MINOR
ENSMUSG00000043531	Sorcs1	ENSMUST00000211687	ENSMUSP00000147591	TRANSLATION	protein_coding	-	CCDS84453.1	1	1168	0	10.335	5.1	510.8	1	0,-3	-	-	13.548	PRINCIPAL:2
ENSMUSG00000043531	Sorcs1	ENSMUST00000072685	ENSMUSP00000072472	TRANSLATION	protein_coding	-	-	5	1192	0	10.005	1.5	510.8	1	0,-3	-	-	11.528	MINOR
ENSMUSG00000043531	Sorcs1	ENSMUST00000168357	ENSMUSP00000129190	TRANSLATION	nonsense_mediated_decay	start	-	1	51	0	0.36	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063683	Glyat	ENSMUST00000157069	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063683	Glyat	ENSMUST00000044976	ENSMUSP00000043308	TRANSLATION	protein_coding	-	CCDS29633.1	1	296	0	0	3.9	438.5	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000063683	Glyat	ENSMUST00000119960	ENSMUSP00000114002	TRANSLATION	protein_coding	-	-	1	262	0	0	0	377.5	0	-4,-5	-	-	2.34	MINOR
ENSMUSG00000063683	Glyat	ENSMUST00000155846	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063683	Glyat	ENSMUST00000123173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059734	Ndufs8	ENSMUST00000235847	ENSMUSP00000158029	TRANSLATION	protein_coding	-	CCDS29402.1	-	212	22	4.53	3.9	47.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000059734	Ndufs8	ENSMUST00000235301	ENSMUSP00000158267	TRANSLATION	protein_coding	stop	-	-	67	4	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059734	Ndufs8	ENSMUST00000237341	ENSMUSP00000158327	TRANSLATION	protein_coding	-	CCDS29402.1	-	212	22	4.53	3.9	47.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000059734	Ndufs8	ENSMUST00000236801	ENSMUSP00000158541	TRANSLATION	protein_coding	-	CCDS29402.1	-	212	22	4.53	3.9	47.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000059734	Ndufs8	ENSMUST00000075092	ENSMUSP00000074600	TRANSLATION	protein_coding	-	CCDS29402.1	1	212	22	4.53	3.9	47.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000116166	Gm49403	ENSMUST00000177826	ENSMUSP00000137432	TRANSLATION	protein_coding	stop	-	2	178	0	0	0	143	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000052387	Trpm3	ENSMUST00000074770	ENSMUSP00000074328	TRANSLATION	protein_coding	-	CCDS29704.1	1	1711	0	1.74	2.9	151.5	12	-4,-5	-	-	12.223	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000235712	ENSMUSP00000157917	TRANSLATION	protein_coding	-	-	-	262	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052387	Trpm3	ENSMUST00000235780	ENSMUSP00000158494	TRANSLATION	protein_coding	-	-	-	1691	0	1.74	0	151.5	12	-4,-5	-	-	11.61	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000236312	ENSMUSP00000157673	TRANSLATION	protein_coding	-	-	-	1699	0	1.74	2.9	151.5	12	-4,-5	-	-	12.223	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000237357	ENSMUSP00000157607	TRANSLATION	protein_coding	-	-	-	1709	0	1.74	2.9	151.5	12	-4,-5	-	-	12.223	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000235522	ENSMUSP00000158045	TRANSLATION	protein_coding	-	-	-	1731	0	1.86	1.7	150.2	12	-4,-5	-	-	12.148	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000236180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000099569	ENSMUSP00000097164	TRANSLATION	protein_coding	-	-	1	1579	0	1.74	2.9	151.5	12	-4,-6	-	-	12.223	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000237455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000099566	ENSMUSP00000097162	TRANSLATION	protein_coding	-	CCDS50404.1	1	234	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000052387	Trpm3	ENSMUST00000236804	ENSMUSP00000157503	TRANSLATION	protein_coding	-	-	-	1697	0	1.74	2.9	151.5	12	-4,-5	-	-	12.223	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000236009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000099564	ENSMUSP00000097160	TRANSLATION	protein_coding	-	CCDS37935.1	1	958	0	1.08	0.5	42.4	10	-4,-6	-	-	3.486	MINOR
ENSMUSG00000052387	Trpm3	ENSMUST00000236787	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000236372	ENSMUSP00000157511	TRANSLATION	protein_coding	-	-	-	1692	0	1.74	0	151.5	12	-4,-5	-	-	11.61	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000237223	ENSMUSP00000158135	TRANSLATION	protein_coding	-	-	-	848	0	1.74	0	151.5	12	-4,-5	-	-	11.61	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000237820	ENSMUSP00000157909	TRANSLATION	protein_coding	-	CCDS29702.1	-	1721	0	1.86	1.5	150.2	12	-4,-5	-	-	12.083	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000235952	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000237470	ENSMUSP00000158191	TRANSLATION	protein_coding	stop	-	-	142	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000052387	Trpm3	ENSMUST00000087576	ENSMUSP00000084857	TRANSLATION	protein_coding	-	CCDS29703.1	1	1721	0	1.74	4.1	151.5	12	-4,-5	-	-	12.61	PRINCIPAL:4
ENSMUSG00000052387	Trpm3	ENSMUST00000238066	ENSMUSP00000157646	TRANSLATION	protein_coding	-	-	-	1689	0	1.74	0	151.5	12	-4,-5	-	-	11.61	ALTERNATIVE:2
ENSMUSG00000052387	Trpm3	ENSMUST00000237421	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052387	Trpm3	ENSMUST00000238159	ENSMUSP00000157422	TRANSLATION	nonsense_mediated_decay	-	-	-	783	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000052387	Trpm3	ENSMUST00000037901	ENSMUSP00000042184	TRANSLATION	protein_coding	-	CCDS29705.1	1	1337	0	1.74	1.7	151.5	12	-4,-5	-	-	11.836	ALTERNATIVE:2
ENSMUSG00000109520	Olfr1493-ps1	ENSMUST00000208667	ENSMUSP00000146547	TRANSLATION	protein_coding	-	-	5	316	0	0.36	1.5	165.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000109520	Olfr1493-ps1	ENSMUST00000207208	ENSMUSP00000146561	TRANSLATION	protein_coding	-	-	5	316	0	0.36	1.5	165.8	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000006435	Neurl1a	ENSMUST00000111807	ENSMUSP00000107438	TRANSLATION	protein_coding	-	CCDS50463.1	1	557	8	2.16	8.3	311.7	0	-4,-6	-	-	21	ALTERNATIVE:1
ENSMUSG00000006435	Neurl1a	ENSMUST00000111808	ENSMUSP00000107439	TRANSLATION	protein_coding	-	CCDS29890.1	1	574	8	2.16	6.3	311.7	0	-4,-2	-	-	20.178	PRINCIPAL:3
ENSMUSG00000006435	Neurl1a	ENSMUST00000235326	ENSMUSP00000158008	TRANSLATION	protein_coding	-	-	-	275	0	1.6	0	139.3	0	-4,-2	-	-	4.446	MINOR
ENSMUSG00000006435	Neurl1a	ENSMUST00000235290	ENSMUSP00000158072	TRANSLATION	protein_coding	-	-	-	218	0	1.6	0	139.3	0	-4,-2	-	-	4.446	MINOR
ENSMUSG00000036372	Tmem258	ENSMUST00000153854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036372	Tmem258	ENSMUST00000040372	ENSMUSP00000044751	TRANSLATION	protein_coding	-	CCDS50385.1	1	79	0	0	17.5	112.1	3	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000036372	Tmem258	ENSMUST00000127878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036372	Tmem258	ENSMUST00000166412	ENSMUSP00000128883	TRANSLATION	protein_coding	-	CCDS50386.1	1	74	0	0	0.5	112.1	3	-3,-5	-	-	6	MINOR
ENSMUSG00000025197	Cyp2c23	ENSMUST00000211830	ENSMUSP00000148377	TRANSLATION	protein_coding	-	CCDS84445.1	1	456	32	8.45	0.5	441.6	0	2,-3	-	-	11.982	MINOR
ENSMUSG00000025197	Cyp2c23	ENSMUST00000026211	ENSMUSP00000026211	TRANSLATION	protein_coding	-	CCDS29841.1	1	494	34	9	2.7	501.4	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000025223	Ldb1	ENSMUST00000136203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025223	Ldb1	ENSMUST00000156585	ENSMUSP00000118546	TRANSLATION	protein_coding	-	CCDS50455.1	1	411	0	1	14.1	181.5	0	-4,-6	-	-	15.028	ALTERNATIVE:1
ENSMUSG00000025223	Ldb1	ENSMUST00000152946	ENSMUSP00000116909	TRANSLATION	protein_coding	-	-	5	373	0	1	16.3	181.5	0	-4,-5	-	-	15.536	ALTERNATIVE:1
ENSMUSG00000025223	Ldb1	ENSMUST00000137771	ENSMUSP00000114667	TRANSLATION	protein_coding	-	-	5	319	0	0	1.2	181.5	0	-4,-5	-	-	6.048	MINOR
ENSMUSG00000025223	Ldb1	ENSMUST00000185355	ENSMUSP00000139562	TRANSLATION	protein_coding	-	CCDS50455.1	1	411	0	1	14.1	181.5	0	-4,-6	-	-	15.028	ALTERNATIVE:1
ENSMUSG00000025223	Ldb1	ENSMUST00000056931	ENSMUSP00000053680	TRANSLATION	protein_coding	-	CCDS29870.1	1	375	0	1	18.3	181.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000025223	Ldb1	ENSMUST00000026252	ENSMUSP00000026252	TRANSLATION	protein_coding	-	CCDS29870.1	1	375	0	1	18.3	181.5	0	-4,-5	-	-	16	PRINCIPAL:3
ENSMUSG00000025223	Ldb1	ENSMUST00000126320	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067231	Cyp2c65	ENSMUST00000087236	ENSMUSP00000084489	TRANSLATION	protein_coding	-	CCDS29791.1	1	490	34	9	0.5	529.3	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000090840	1700092M07Rik	ENSMUST00000187020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090840	1700092M07Rik	ENSMUST00000163172	ENSMUSP00000130094	TRANSLATION	protein_coding	-	CCDS50382.1	1	86	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094219	Calhm3	ENSMUST00000178630	ENSMUSP00000136302	TRANSLATION	protein_coding	-	-	5	347	0	0	0	337.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050623	Catsperz	ENSMUST00000235924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050623	Catsperz	ENSMUST00000236318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050623	Catsperz	ENSMUST00000237380	ENSMUSP00000158477	TRANSLATION	protein_coding	-	-	-	159	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000050623	Catsperz	ENSMUST00000237743	ENSMUSP00000158423	TRANSLATION	protein_coding	start	-	-	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050623	Catsperz	ENSMUST00000057716	ENSMUSP00000056681	TRANSLATION	protein_coding	-	CCDS29510.1	1	194	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000050623	Catsperz	ENSMUST00000236981	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050623	Catsperz	ENSMUST00000237586	ENSMUSP00000158037	TRANSLATION	protein_coding	start	-	-	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050623	Catsperz	ENSMUST00000237563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050623	Catsperz	ENSMUST00000237709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045826	Ptprcap	ENSMUST00000061086	ENSMUSP00000053412	TRANSLATION	protein_coding	-	CCDS37884.1	1	197	0	0	1.5	159.4	1	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045826	Ptprcap	ENSMUST00000236632	ENSMUSP00000158331	TRANSLATION	protein_coding	stop	-	-	134	0	0	0	86.7	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000004231	Pax2	ENSMUST00000173346	ENSMUSP00000134311	TRANSLATION	protein_coding	stop	-	5	303	0	2.6	0	250.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000004231	Pax2	ENSMUST00000174490	ENSMUSP00000134661	TRANSLATION	protein_coding	-	CCDS37998.2	1	394	0	2.6	5.7	433.8	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000004231	Pax2	ENSMUST00000004340	ENSMUSP00000004340	TRANSLATION	protein_coding	-	-	5	416	0	2.6	2.2	431.9	0	-4,-5	-	-	12.396	MINOR
ENSMUSG00000024803	Ankrd1	ENSMUST00000236579	ENSMUSP00000157975	TRANSLATION	nonsense_mediated_decay	-	-	-	285	0	4.88	0	121.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024803	Ankrd1	ENSMUST00000235941	ENSMUSP00000158281	TRANSLATION	nonsense_mediated_decay	-	-	-	202	0	1.8	0	26.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024803	Ankrd1	ENSMUST00000237142	ENSMUSP00000157960	TRANSLATION	protein_coding	-	CCDS29771.1	-	319	0	5.52	7.5	121.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024803	Ankrd1	ENSMUST00000235221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024803	Ankrd1	ENSMUST00000025718	ENSMUSP00000025718	TRANSLATION	protein_coding	-	-	1	315	0	5.52	0.5	119.7	0	-4,-5	-	-	11.874	MINOR
ENSMUSG00000024803	Ankrd1	ENSMUST00000237338	ENSMUSP00000158472	TRANSLATION	nonsense_mediated_decay	-	-	-	262	0	4.064	0	76.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056078	Lipm	ENSMUST00000237637	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056078	Lipm	ENSMUST00000025685	ENSMUSP00000025685	TRANSLATION	protein_coding	-	CCDS50419.1	1	422	6	7.14	6.3	97.2	0	-1,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000056078	Lipm	ENSMUST00000235239	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047604	Frat2	ENSMUST00000059231	ENSMUSP00000052788	TRANSLATION	protein_coding	-	CCDS29813.1	-	231	0	0.2	4.1	241.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000003228	Grk5	ENSMUST00000236876	ENSMUSP00000157698	TRANSLATION	protein_coding	-	-	-	125	0	3.25	0	35.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000003228	Grk5	ENSMUST00000235623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003228	Grk5	ENSMUST00000003313	ENSMUSP00000003313	TRANSLATION	protein_coding	-	CCDS29945.1	1	590	19	14.5	11.7	296.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035283	Adrb1	ENSMUST00000236875	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035283	Adrb1	ENSMUST00000038949	ENSMUSP00000040847	TRANSLATION	protein_coding	-	CCDS29919.1	-	466	0	0.8	1.5	270.4	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000117666	Gm550	ENSMUST00000235513	ENSMUSP00000158551	TRANSLATION	protein_coding	-	-	-	184	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000117666	Gm550	ENSMUST00000237778	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024857	Cabp2	ENSMUST00000159556	ENSMUSP00000124389	TRANSLATION	protein_coding	-	CCDS50349.1	1	168	16	4.09	4	90.8	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000024857	Cabp2	ENSMUST00000162584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024857	Cabp2	ENSMUST00000159148	ENSMUSP00000125740	TRANSLATION	protein_coding	-	CCDS50348.1	1	203	16	3.69	1.5	90.8	0	-4,-5	-	-	17.369	MINOR
ENSMUSG00000024857	Cabp2	ENSMUST00000159593	ENSMUSP00000124607	TRANSLATION	protein_coding	stop	-	5	103	7	1.33	0	31.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024857	Cabp2	ENSMUST00000162908	ENSMUSP00000125255	TRANSLATION	protein_coding	-	CCDS29413.2	1	221	16	4.09	1.5	90.8	0	-4,-2	-	-	18.167	PRINCIPAL:3
ENSMUSG00000024844	Banf1	ENSMUST00000237704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024844	Banf1	ENSMUST00000237167	ENSMUSP00000158117	TRANSLATION	protein_coding	-	CCDS29458.1	-	89	0	2	19.5	149.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024844	Banf1	ENSMUST00000025762	ENSMUSP00000025762	TRANSLATION	protein_coding	-	CCDS29458.1	1	89	0	2	19.5	149.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024844	Banf1	ENSMUST00000170010	ENSMUSP00000126202	TRANSLATION	protein_coding	-	CCDS29458.1	1	89	0	2	19.5	149.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000003053	Cyp2c29	ENSMUST00000003137	ENSMUSP00000003137	TRANSLATION	protein_coding	-	CCDS29793.1	1	490	35	9	2.7	545.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000003053	Cyp2c29	ENSMUST00000177087	ENSMUSP00000135839	TRANSLATION	nonsense_mediated_decay	-	-	5	120	1	2.132	0	72.3	0	3,-2	-	-	-1	MINOR
ENSMUSG00000003053	Cyp2c29	ENSMUST00000176624	ENSMUSP00000135863	TRANSLATION	protein_coding	-	-	1	451	35	8.16	0	515.8	0	-4,-5	-	-	14.544	MINOR
ENSMUSG00000058216	Gstp3	ENSMUST00000189808	ENSMUSP00000140159	TRANSLATION	protein_coding	-	CCDS79668.1	1	210	9	5.5	1.5	84.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000058216	Gstp3	ENSMUST00000076451	ENSMUSP00000075779	TRANSLATION	protein_coding	start	-	1	210	9	5.5	1.5	84.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000058216	Gstp3	ENSMUST00000238086	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058216	Gstp3	ENSMUST00000236991	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024987	Cyp26a1	ENSMUST00000236500	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024987	Cyp26a1	ENSMUST00000025946	ENSMUSP00000025946	TRANSLATION	protein_coding	-	CCDS29780.1	1	497	27	4.2	6.3	223	0	0,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000024976	Shoc2	ENSMUST00000025932	ENSMUSP00000025932	TRANSLATION	protein_coding	-	CCDS29904.1	1	582	0	8.47	14.8	161.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024976	Shoc2	ENSMUST00000237296	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024976	Shoc2	ENSMUST00000237801	ENSMUSP00000157994	TRANSLATION	nonsense_mediated_decay	start	-	-	30	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024976	Shoc2	ENSMUST00000237908	ENSMUSP00000158077	TRANSLATION	protein_coding	start	-	-	372	0	6.57	0	87.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024976	Shoc2	ENSMUST00000235945	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024976	Shoc2	ENSMUST00000169861	ENSMUSP00000127932	TRANSLATION	protein_coding	-	CCDS29904.1	1	582	0	8.47	14.8	161.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024976	Shoc2	ENSMUST00000236144	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033053	1700028P14Rik	ENSMUST00000035849	ENSMUSP00000048680	TRANSLATION	protein_coding	-	CCDS29708.1	1	228	0	0	0.5	287	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035804	Ins1	ENSMUST00000039652	ENSMUSP00000049095	TRANSLATION	protein_coding	-	CCDS29898.1	1	108	0	1	3.9	92.5	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000041035	Gm17018	ENSMUST00000235805	ENSMUSP00000158295	TRANSLATION	nonsense_mediated_decay	-	-	-	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041035	Gm17018	ENSMUST00000235584	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041035	Gm17018	ENSMUST00000047057	ENSMUSP00000045683	TRANSLATION	protein_coding	-	CCDS29862.1	1	203	0	0	8.8	296.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000041035	Gm17018	ENSMUST00000237600	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041035	Gm17018	ENSMUST00000161373	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025001	Hells	ENSMUST00000155465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025001	Hells	ENSMUST00000025965	ENSMUSP00000025965	TRANSLATION	protein_coding	-	CCDS29789.1	1	821	5	9.56	2.9	273.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000025001	Hells	ENSMUST00000127968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025001	Hells	ENSMUST00000138292	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025001	Hells	ENSMUST00000128949	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025001	Hells	ENSMUST00000145051	ENSMUSP00000116710	TRANSLATION	protein_coding	stop	-	3	209	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056612	Ppp1r14b	ENSMUST00000237084	ENSMUSP00000158340	TRANSLATION	protein_coding	-	-	-	202	0	1.28	0	80.4	0	-3,-4	-	-	7.518	MINOR
ENSMUSG00000056612	Ppp1r14b	ENSMUST00000237235	ENSMUSP00000157427	TRANSLATION	protein_coding	start	-	-	94	0	1.28	0	80.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056612	Ppp1r14b	ENSMUST00000236218	ENSMUSP00000157762	TRANSLATION	protein_coding	start	-	-	181	0	1.71	0	94.7	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000056612	Ppp1r14b	ENSMUST00000235195	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056612	Ppp1r14b	ENSMUST00000070850	ENSMUSP00000064129	TRANSLATION	protein_coding	-	CCDS29514.1	1	147	0	2.21	5.1	113	0	-3,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000054827	Cyp2c50	ENSMUST00000124391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054827	Cyp2c50	ENSMUST00000080171	ENSMUSP00000079065	TRANSLATION	protein_coding	-	CCDS29801.1	1	490	35	9	0.5	537.7	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000054827	Cyp2c50	ENSMUST00000068094	ENSMUSP00000068039	TRANSLATION	protein_coding	-	CCDS50433.1	1	431	32	8	0.5	471.1	0	0,-4	-	-	10.008	MINOR
ENSMUSG00000025083	Afap1l2	ENSMUST00000155467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025083	Afap1l2	ENSMUST00000126964	ENSMUSP00000123400	TRANSLATION	protein_coding	stop	-	2	134	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025083	Afap1l2	ENSMUST00000225394	ENSMUSP00000153082	TRANSLATION	protein_coding	start/stop	-	-	31	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025083	Afap1l2	ENSMUST00000118800	ENSMUSP00000113745	TRANSLATION	protein_coding	-	CCDS50476.1	1	825	0	2	0.5	73.1	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025083	Afap1l2	ENSMUST00000111584	ENSMUSP00000107210	TRANSLATION	protein_coding	-	CCDS50477.1	1	843	0	2	0.5	73.1	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025083	Afap1l2	ENSMUST00000122359	ENSMUSP00000112387	TRANSLATION	protein_coding	-	CCDS29924.1	1	769	0	2	0.5	73.1	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000025083	Afap1l2	ENSMUST00000132851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025083	Afap1l2	ENSMUST00000148049	ENSMUSP00000120490	TRANSLATION	protein_coding	stop	-	1	264	0	0	0	37.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000135911	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024830	Rps6kb2	ENSMUST00000154307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024830	Rps6kb2	ENSMUST00000237691	ENSMUSP00000158503	TRANSLATION	nonsense_mediated_decay	-	-	-	160	12	2.83	0	52.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000151727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024830	Rps6kb2	ENSMUST00000125057	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024830	Rps6kb2	ENSMUST00000127605	ENSMUSP00000123376	TRANSLATION	nonsense_mediated_decay	-	-	5	312	21	6.824	0	202.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000155303	ENSMUSP00000157921	TRANSLATION	protein_coding	stop	-	3	114	10	2.91	0	105.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000141104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024830	Rps6kb2	ENSMUST00000025749	ENSMUSP00000025749	TRANSLATION	protein_coding	-	CCDS29419.1	1	485	21	10.01	3.9	270.2	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024830	Rps6kb2	ENSMUST00000118483	ENSMUSP00000112512	TRANSLATION	protein_coding	-	-	5	392	21	9.74	0	257.5	0	-4,-5	-	-	16.698	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000130469	ENSMUSP00000117446	TRANSLATION	nonsense_mediated_decay	-	-	1	153	12	2.83	0	51.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024830	Rps6kb2	ENSMUST00000137431	ENSMUSP00000116744	TRANSLATION	nonsense_mediated_decay	-	-	5	285	21	6.36	0	205.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000058470	Gm8369	ENSMUST00000191475	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058470	Gm8369	ENSMUST00000188633	ENSMUSP00000141067	TRANSLATION	protein_coding	-	CCDS50396.1	3	166	0	0	0.5	0	2	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000058470	Gm8369	ENSMUST00000079855	ENSMUSP00000132521	TRANSLATION	protein_coding	-	CCDS50396.1	5	166	0	0	0.5	0	2	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000058470	Gm8369	ENSMUST00000186423	ENSMUSP00000140897	TRANSLATION	nonsense_mediated_decay	-	-	3	80	0	0	0	35.9	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000058470	Gm8369	ENSMUST00000189635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000058470	Gm8369	ENSMUST00000185867	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058470	Gm8369	ENSMUST00000190498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024846	Cst6	ENSMUST00000237627	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024846	Cst6	ENSMUST00000238111	ENSMUSP00000158005	TRANSLATION	protein_coding	stop	-	-	136	0	1	0	24.8	0	2,-2	-	-	-1	MINOR
ENSMUSG00000024846	Cst6	ENSMUST00000025764	ENSMUSP00000025764	TRANSLATION	protein_coding	-	CCDS29457.1	1	149	0	3	3.9	62.5	0	2,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000024940	Ltbp3	ENSMUST00000237280	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000081496	ENSMUSP00000080214	TRANSLATION	protein_coding	-	CCDS37891.1	5	1253	47	13.32	2.7	555.3	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024940	Ltbp3	ENSMUST00000237327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000236130	ENSMUSP00000158570	TRANSLATION	protein_coding	start	-	-	415	29	6.085	0	228.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024940	Ltbp3	ENSMUST00000236258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000235336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000235898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000237317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000236529	ENSMUSP00000157845	TRANSLATION	nonsense_mediated_decay	start	-	-	153	14	2.64	0	112.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024940	Ltbp3	ENSMUST00000237180	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024940	Ltbp3	ENSMUST00000236617	ENSMUSP00000158261	TRANSLATION	protein_coding	start/stop	-	-	118	0	0	0	31.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024940	Ltbp3	ENSMUST00000237128	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003555	Cyp17a1	ENSMUST00000026012	ENSMUSP00000026012	TRANSLATION	protein_coding	-	CCDS29882.1	1	507	33	7.75	1.5	464	0	1,-3	-	-	17.334	PRINCIPAL:1
ENSMUSG00000003555	Cyp17a1	ENSMUST00000236174	ENSMUSP00000157718	TRANSLATION	protein_coding	-	-	-	455	34	6.95	0	377.8	0	1,-3	-	-	11.226	MINOR
ENSMUSG00000003555	Cyp17a1	ENSMUST00000131142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003555	Cyp17a1	ENSMUST00000156577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025172	Ankrd2	ENSMUST00000026172	ENSMUSP00000026172	TRANSLATION	protein_coding	-	CCDS50437.1	1	328	0	4.88	1.5	81.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025172	Ankrd2	ENSMUST00000238137	ENSMUSP00000157671	TRANSLATION	protein_coding	-	-	-	332	0	4.88	1.2	81.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000060224	Pyroxd2	ENSMUST00000237747	ENSMUSP00000158428	TRANSLATION	protein_coding	-	-	-	164	17	1.855	0	40.9	0	-4,-2	-	-	2.712	MINOR
ENSMUSG00000060224	Pyroxd2	ENSMUST00000236659	ENSMUSP00000157893	TRANSLATION	protein_coding	-	-	-	587	32	5.175	0	40.6	0	-4,0	-	-	14.364	MINOR
ENSMUSG00000060224	Pyroxd2	ENSMUST00000238158	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060224	Pyroxd2	ENSMUST00000076505	ENSMUSP00000075825	TRANSLATION	protein_coding	-	CCDS37991.1	1	581	32	5.34	3.9	90.4	0	-4,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000060224	Pyroxd2	ENSMUST00000235183	ENSMUSP00000157694	TRANSLATION	nonsense_mediated_decay	-	-	-	52	6	0.61	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025050	Pcgf6	ENSMUST00000235370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025050	Pcgf6	ENSMUST00000235633	ENSMUSP00000157869	TRANSLATION	nonsense_mediated_decay	-	-	-	239	8	2.95	0	39.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025050	Pcgf6	ENSMUST00000236339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025050	Pcgf6	ENSMUST00000026032	ENSMUSP00000026032	TRANSLATION	protein_coding	-	CCDS29885.1	1	353	8	2.95	0.5	39.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000096436	Olfr1437	ENSMUST00000052558	ENSMUSP00000056003	TRANSLATION	protein_coding	-	CCDS29628.1	-	312	0	0	6.3	184.9	4	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000096436	Olfr1437	ENSMUST00000207241	ENSMUSP00000146333	TRANSLATION	protein_coding	-	CCDS29628.1	2	312	0	0	6.3	184.9	4	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000067571	Ms4a15	ENSMUST00000144485	ENSMUSP00000115600	TRANSLATION	protein_coding	stop	-	5	115	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067571	Ms4a15	ENSMUST00000145110	ENSMUSP00000117513	TRANSLATION	protein_coding	stop	-	3	129	0	0	0	0	2	-4,-1	-	-	-1	MINOR
ENSMUSG00000067571	Ms4a15	ENSMUST00000087923	ENSMUSP00000085234	TRANSLATION	protein_coding	-	CCDS29594.1	1	245	0	0	1.5	78.4	5	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000016495	Plgrkt	ENSMUST00000155367	ENSMUSP00000118861	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	89.1	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000016495	Plgrkt	ENSMUST00000143467	ENSMUSP00000120466	TRANSLATION	protein_coding	-	CCDS29734.1	1	147	0	0	10.8	190.5	2	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000016495	Plgrkt	ENSMUST00000139860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016495	Plgrkt	ENSMUST00000139176	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016495	Plgrkt	ENSMUST00000141838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016495	Plgrkt	ENSMUST00000138051	ENSMUSP00000118559	TRANSLATION	protein_coding	stop	-	3	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016495	Plgrkt	ENSMUST00000129608	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016495	Plgrkt	ENSMUST00000016639	ENSMUSP00000016639	TRANSLATION	protein_coding	-	CCDS29734.1	1	147	0	0	10.8	190.5	2	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000016495	Plgrkt	ENSMUST00000152936	ENSMUSP00000114754	TRANSLATION	protein_coding	-	-	1	46	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000016495	Plgrkt	ENSMUST00000126800	ENSMUSP00000118295	TRANSLATION	protein_coding	stop	-	2	42	0	0	0	42.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034765	Dusp5	ENSMUST00000038287	ENSMUSP00000047900	TRANSLATION	protein_coding	-	CCDS38024.1	5	384	9	2.72	6.3	192.1	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000067513	Olfr1436	ENSMUST00000087812	ENSMUSP00000085113	TRANSLATION	protein_coding	-	CCDS29627.1	-	315	0	0	6.3	181.2	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000024764	Naa40	ENSMUST00000025675	ENSMUSP00000025675	TRANSLATION	protein_coding	-	CCDS50377.1	1	237	22	6	9.6	24.7	0	-4,-5	-	-	20.952	PRINCIPAL:1
ENSMUSG00000024764	Naa40	ENSMUST00000236628	ENSMUSP00000157824	TRANSLATION	nonsense_mediated_decay	-	-	-	102	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024764	Naa40	ENSMUST00000235323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024764	Naa40	ENSMUST00000237834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024764	Naa40	ENSMUST00000236769	ENSMUSP00000157616	TRANSLATION	protein_coding	-	-	-	191	22	5	2	24.9	0	-4,-5	-	-	16.35	MINOR
ENSMUSG00000079342	Lipo1	ENSMUST00000148137	ENSMUSP00000118385	TRANSLATION	protein_coding	-	-	5	399	4	7.5	1.5	69.7	0	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000006463	Zdhhc24	ENSMUST00000162754	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006463	Zdhhc24	ENSMUST00000160014	ENSMUSP00000123709	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0	0	0	4	-2,-4	-	-	-1	MINOR
ENSMUSG00000006463	Zdhhc24	ENSMUST00000006632	ENSMUSP00000006632	TRANSLATION	protein_coding	-	CCDS50353.1	1	284	8	0	6.3	91.7	5	-2,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000006463	Zdhhc24	ENSMUST00000162088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006463	Zdhhc24	ENSMUST00000162134	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006463	Zdhhc24	ENSMUST00000162720	ENSMUSP00000124337	TRANSLATION	nonsense_mediated_decay	-	-	1	105	0	0	0	0	4	-2,-4	-	-	-1	MINOR
ENSMUSG00000024992	Pde6c	ENSMUST00000025956	ENSMUSP00000025956	TRANSLATION	protein_coding	-	CCDS37971.1	1	861	4	13.62	3.9	364.7	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024992	Pde6c	ENSMUST00000112329	ENSMUSP00000107948	TRANSLATION	protein_coding	-	CCDS50431.1	1	836	4	12.87	0.5	283.7	0	-4,-5	-	-	9.64	MINOR
ENSMUSG00000024772	Ehd1	ENSMUST00000148547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024772	Ehd1	ENSMUST00000025684	ENSMUSP00000025684	TRANSLATION	protein_coding	-	CCDS29501.1	1	534	24	5	17.5	110.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024772	Ehd1	ENSMUST00000165797	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024772	Ehd1	ENSMUST00000171203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047298	Kcnv2	ENSMUST00000056708	ENSMUSP00000055091	TRANSLATION	protein_coding	-	CCDS29722.1	1	562	0	0.9	0.5	201.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024729	Ms4a20	ENSMUST00000025635	ENSMUSP00000025635	TRANSLATION	protein_coding	-	CCDS50393.1	1	209	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000024729	Ms4a20	ENSMUST00000188756	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047044	D030056L22Rik	ENSMUST00000055792	ENSMUSP00000061933	TRANSLATION	protein_coding	-	CCDS29690.1	1	162	0	0	1.5	28.9	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000047044	D030056L22Rik	ENSMUST00000062753	ENSMUSP00000108465	TRANSLATION	protein_coding	-	-	1	163	0	0	1.5	28.9	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000036450	Hif1an	ENSMUST00000040455	ENSMUSP00000035326	TRANSLATION	protein_coding	-	CCDS29852.1	1	349	3	7.25	5.1	136.5	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000036450	Hif1an	ENSMUST00000131032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000225203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000238025	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024883	Rin1	ENSMUST00000224363	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000224254	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000025818	ENSMUSP00000025818	TRANSLATION	protein_coding	-	-	1	774	0	2	0	86.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024883	Rin1	ENSMUST00000224178	ENSMUSP00000153351	TRANSLATION	protein_coding	stop	-	-	37	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024883	Rin1	ENSMUST00000237816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000225427	ENSMUSP00000153189	TRANSLATION	protein_coding	-	CCDS29447.1	-	763	0	2	0.5	86.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024883	Rin1	ENSMUST00000236248	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024883	Rin1	ENSMUST00000224032	ENSMUSP00000153118	TRANSLATION	protein_coding	start/stop	-	-	193	0	1.88	0	86.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024883	Rin1	ENSMUST00000225799	ENSMUSP00000153574	TRANSLATION	protein_coding	stop	-	-	60	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024883	Rin1	ENSMUST00000237762	ENSMUSP00000157927	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024883	Rin1	ENSMUST00000224288	ENSMUSP00000153481	TRANSLATION	nonsense_mediated_decay	-	-	-	39	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025075	Habp2	ENSMUST00000171341	ENSMUSP00000126235	TRANSLATION	nonsense_mediated_decay	-	-	5	274	15	5.01	0	131.1	0	3,-1	-	-	-1	MINOR
ENSMUSG00000025075	Habp2	ENSMUST00000078284	ENSMUSP00000077402	TRANSLATION	protein_coding	-	-	5	554	28	9.31	0.5	346.3	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000025075	Habp2	ENSMUST00000165407	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025075	Habp2	ENSMUST00000163502	ENSMUSP00000128964	TRANSLATION	protein_coding	start/stop	-	5	220	9	4.11	0	161.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025075	Habp2	ENSMUST00000166049	ENSMUSP00000132444	TRANSLATION	protein_coding	-	-	5	549	28	9.31	0	346.3	0	3,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000025075	Habp2	ENSMUST00000165522	ENSMUSP00000130809	TRANSLATION	nonsense_mediated_decay	start	-	5	124	3	1.29	0	52.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025075	Habp2	ENSMUST00000095948	ENSMUSP00000093641	TRANSLATION	protein_coding	-	CCDS50475.1	1	517	28	9.31	0.5	346.3	0	3,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000024826	Dpf2	ENSMUST00000136983	ENSMUSP00000120125	TRANSLATION	protein_coding	-	CCDS37892.1	1	391	22	5.25	8.8	166.2	0	-4,-5	-	-	20.388	PRINCIPAL:1
ENSMUSG00000024826	Dpf2	ENSMUST00000236970	ENSMUSP00000158488	TRANSLATION	protein_coding	start	-	-	349	22	5.25	0	109.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024826	Dpf2	ENSMUST00000154365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024826	Dpf2	ENSMUST00000142995	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024826	Dpf2	ENSMUST00000137465	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024826	Dpf2	ENSMUST00000155937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024826	Dpf2	ENSMUST00000123029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024826	Dpf2	ENSMUST00000129816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024826	Dpf2	ENSMUST00000118623	ENSMUSP00000113465	TRANSLATION	protein_coding	-	CCDS70920.1	5	405	20	5	10.8	166.2	0	-4,-5	-	-	19.17	MINOR
ENSMUSG00000024826	Dpf2	ENSMUST00000025746	ENSMUSP00000025746	TRANSLATION	nonsense_mediated_decay	start	-	1	214	4	1.75	0	59	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024664	Fads3	ENSMUST00000115995	ENSMUSP00000111659	TRANSLATION	protein_coding	-	CCDS29570.1	1	449	20	1.88	3.9	181.6	2	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024664	Fads3	ENSMUST00000237672	ENSMUSP00000158307	TRANSLATION	protein_coding	-	-	-	383	20	1.88	0	173.9	0	-4,-5	-	-	17.538	MINOR
ENSMUSG00000024664	Fads3	ENSMUST00000235185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024664	Fads3	ENSMUST00000235562	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024664	Fads3	ENSMUST00000237226	ENSMUSP00000158123	TRANSLATION	protein_coding	start	-	-	74	0	0	0	53	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024740	Ddb1	ENSMUST00000237138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000237804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000236937	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000025649	ENSMUSP00000025649	TRANSLATION	protein_coding	-	CCDS37915.1	1	1140	0	26.5	13.5	293.1	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000024740	Ddb1	ENSMUST00000236280	ENSMUSP00000158020	TRANSLATION	protein_coding	stop	-	-	420	0	9.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024740	Ddb1	ENSMUST00000236722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000237337	ENSMUSP00000157538	TRANSLATION	protein_coding	-	-	-	451	0	10.5	0	293.1	0	-4,-6	-	-	6	MINOR
ENSMUSG00000024740	Ddb1	ENSMUST00000236328	ENSMUSP00000158549	TRANSLATION	protein_coding	start/stop	-	-	196	0	3.75	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024740	Ddb1	ENSMUST00000237318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000236596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024740	Ddb1	ENSMUST00000236279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024770	Lipn	ENSMUST00000126710	ENSMUSP00000114551	TRANSLATION	protein_coding	stop	-	3	180	2	3.65	0	71.7	0	3,-2	-	-	-1	MINOR
ENSMUSG00000024770	Lipn	ENSMUST00000025682	ENSMUSP00000025682	TRANSLATION	protein_coding	-	CCDS37962.1	1	400	4	7.75	2.7	166.7	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000024770	Lipn	ENSMUST00000148821	ENSMUSP00000120184	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	1.4	0	45.9	0	3,-2	-	-	-1	MINOR
ENSMUSG00000057270	Olfr1501	ENSMUST00000208493	ENSMUSP00000147096	TRANSLATION	protein_coding	-	CCDS29676.1	2	315	0	0	2.7	154	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057270	Olfr1501	ENSMUST00000073966	ENSMUSP00000073620	TRANSLATION	protein_coding	-	CCDS29676.1	-	315	0	0	2.7	154	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057270	Olfr1501	ENSMUST00000215350	ENSMUSP00000151094	TRANSLATION	protein_coding	-	CCDS29676.1	5	315	0	0	2.7	154	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067085	Gm10197	ENSMUST00000086887	ENSMUSP00000084100	TRANSLATION	protein_coding	start/stop	-	-	67	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000039330	Tsga10ip	ENSMUST00000044527	ENSMUSP00000047408	TRANSLATION	protein_coding	start	-	1	157	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039330	Tsga10ip	ENSMUST00000235569	ENSMUSP00000158150	TRANSLATION	protein_coding	-	-	-	570	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024960	Plcb3	ENSMUST00000237726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024960	Plcb3	ENSMUST00000235352	ENSMUSP00000157584	TRANSLATION	protein_coding	stop	-	-	508	10	11.5	0	229	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024960	Plcb3	ENSMUST00000235832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024960	Plcb3	ENSMUST00000025912	ENSMUSP00000025912	TRANSLATION	protein_coding	-	CCDS70925.1	1	1234	13	28.75	3.9	586	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000024960	Plcb3	ENSMUST00000237808	ENSMUSP00000158254	TRANSLATION	protein_coding	start	-	-	378	0	8.25	0	185.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024960	Plcb3	ENSMUST00000236961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024960	Plcb3	ENSMUST00000237074	ENSMUSP00000158236	TRANSLATION	protein_coding	stop	-	-	191	3	5.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024960	Plcb3	ENSMUST00000237446	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024960	Plcb3	ENSMUST00000235560	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024960	Plcb3	ENSMUST00000236597	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062488	Ifit3b	ENSMUST00000076249	ENSMUSP00000075599	TRANSLATION	protein_coding	-	CCDS50423.1	1	403	0	0.8	0.5	42.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024863	Mbl2	ENSMUST00000025797	ENSMUSP00000025797	TRANSLATION	protein_coding	-	CCDS29742.1	1	244	14	2.2	1.5	97	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024909	Efemp2	ENSMUST00000166303	ENSMUSP00000128827	TRANSLATION	protein_coding	-	CCDS29466.1	5	443	47	7.7	7.5	245.9	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000024909	Efemp2	ENSMUST00000166253	ENSMUSP00000127312	TRANSLATION	protein_coding	stop	-	5	280	31	4.65	0	167.9	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000167855	ENSMUSP00000132194	TRANSLATION	protein_coding	stop	-	3	153	26	4.05	0	87.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000167827	ENSMUSP00000127478	TRANSLATION	protein_coding	stop	-	5	191	33	5.13	0	148	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000235523	ENSMUSP00000158440	TRANSLATION	protein_coding	-	-	-	455	47	7.7	0	245.9	0	2,-1	-	-	18	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000164204	ENSMUSP00000128414	TRANSLATION	protein_coding	start	-	5	120	7	1.57	0	32.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000168330	ENSMUSP00000130003	TRANSLATION	nonsense_mediated_decay	start	-	5	70	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000165485	ENSMUSP00000133016	TRANSLATION	protein_coding	-	CCDS29466.1	1	443	47	7.7	7.5	245.9	0	4,-1	-	-	21	PRINCIPAL:1
ENSMUSG00000024909	Efemp2	ENSMUST00000236518	ENSMUSP00000158144	TRANSLATION	protein_coding	-	-	-	404	38	6.7	0	204.3	0	4,-1	-	-	7.506	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000167920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024909	Efemp2	ENSMUST00000169943	ENSMUSP00000126477	TRANSLATION	nonsense_mediated_decay	-	-	5	82	0	0.32	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000236109	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024909	Efemp2	ENSMUST00000167371	ENSMUSP00000129746	TRANSLATION	protein_coding	-	-	5	402	37	6.9	1	200.2	0	4,-1	-	-	7.656	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000070118	ENSMUSP00000064719	TRANSLATION	protein_coding	-	CCDS50358.1	1	462	47	7.7	0.5	245.9	0	-1,-4	-	-	18	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000167304	ENSMUSP00000129982	TRANSLATION	protein_coding	stop	-	5	128	10	2.57	0	32.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000164388	ENSMUSP00000131979	TRANSLATION	protein_coding	start	-	5	157	10	2.08	0	57.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024909	Efemp2	ENSMUST00000166558	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095484	Olfr1480	ENSMUST00000207904	ENSMUSP00000147226	TRANSLATION	protein_coding	-	CCDS29664.1	3	315	0	0.24	6.3	181.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095484	Olfr1480	ENSMUST00000207987	ENSMUSP00000146931	TRANSLATION	protein_coding	-	-	3	359	0	0.24	0	181.3	6	-2,-5	-	-	12	MINOR
ENSMUSG00000095484	Olfr1480	ENSMUST00000072219	ENSMUSP00000072076	TRANSLATION	protein_coding	-	CCDS29664.1	-	315	0	0.24	6.3	181.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000095484	Olfr1480	ENSMUST00000216709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095484	Olfr1480	ENSMUST00000207093	ENSMUSP00000146782	TRANSLATION	protein_coding	-	CCDS29664.1	5	315	0	0.24	6.3	181.3	6	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000075227	Znhit2	ENSMUST00000162726	ENSMUSP00000134031	TRANSLATION	protein_coding	-	CCDS57131.1	-	399	8	0.2	1.5	46.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000075296	Aldh3b2	ENSMUST00000143380	ENSMUSP00000115356	TRANSLATION	protein_coding	-	CCDS50347.1	1	479	28	8.8	0.5	288.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000042179	Pnliprp1	ENSMUST00000235457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042179	Pnliprp1	ENSMUST00000235461	ENSMUSP00000157428	TRANSLATION	nonsense_mediated_decay	start	-	-	35	2	1	0	37.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042179	Pnliprp1	ENSMUST00000236445	ENSMUSP00000157947	TRANSLATION	protein_coding	stop	-	-	252	9	6.08	0	352.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000042179	Pnliprp1	ENSMUST00000235738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042179	Pnliprp1	ENSMUST00000048644	ENSMUSP00000045465	TRANSLATION	protein_coding	-	CCDS29931.1	1	473	13	11.58	0.5	567	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000042179	Pnliprp1	ENSMUST00000235509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067656	Slc22a27	ENSMUST00000182102	ENSMUSP00000138475	TRANSLATION	protein_coding	-	-	1	443	0	2.28	0.5	40	10	-4,-7	-	-	5.532	MINOR
ENSMUSG00000067656	Slc22a27	ENSMUST00000075619	ENSMUSP00000093991	TRANSLATION	protein_coding	-	CCDS50380.1	1	551	0	3	0.5	123.8	14	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000058624	Gda	ENSMUST00000087600	ENSMUSP00000084882	TRANSLATION	protein_coding	-	CCDS29698.1	1	454	18	12.16	8.8	258	0	-2,0	-	-	21	PRINCIPAL:1
ENSMUSG00000058624	Gda	ENSMUST00000121725	ENSMUSP00000112758	TRANSLATION	protein_coding	-	-	1	380	18	10.16	1.7	257.5	0	-4,-5	-	-	14.238	MINOR
ENSMUSG00000058624	Gda	ENSMUST00000136258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058624	Gda	ENSMUST00000237823	ENSMUSP00000157532	TRANSLATION	protein_coding	-	-	-	429	18	11.16	0	258	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000237077	ENSMUSP00000157527	TRANSLATION	nonsense_mediated_decay	-	-	-	289	0	3.6	0	115.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000169459	ENSMUSP00000133273	TRANSLATION	protein_coding	-	CCDS57145.1	5	1021	0	5.05	0.5	152.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000074818	Pdzd7	ENSMUST00000237962	ENSMUSP00000157471	TRANSLATION	nonsense_mediated_decay	-	-	-	289	0	3.6	0	115.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000237833	ENSMUSP00000157695	TRANSLATION	nonsense_mediated_decay	-	-	-	409	0	4.05	0	115.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000237227	ENSMUSP00000157966	TRANSLATION	nonsense_mediated_decay	-	-	-	476	0	4.05	0	115.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000038901	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074818	Pdzd7	ENSMUST00000238074	ENSMUSP00000157926	TRANSLATION	nonsense_mediated_decay	-	-	-	245	0	2.6	0	57	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000074818	Pdzd7	ENSMUST00000145391	ENSMUSP00000119002	TRANSLATION	nonsense_mediated_decay	-	-	5	553	0	4.05	0	115.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000006270	Vax1	ENSMUST00000172821	ENSMUSP00000134642	TRANSLATION	protein_coding	-	CCDS29933.1	1	338	0	0.8	1.5	77.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000006270	Vax1	ENSMUST00000173710	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055491	Pprc1	ENSMUST00000147640	ENSMUSP00000116857	TRANSLATION	protein_coding	stop	-	3	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055491	Pprc1	ENSMUST00000128386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055491	Pprc1	ENSMUST00000111899	ENSMUSP00000107530	TRANSLATION	protein_coding	-	CCDS38005.1	1	1644	0	1.48	0.5	32.7	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000055491	Pprc1	ENSMUST00000135327	ENSMUSP00000119672	TRANSLATION	protein_coding	stop	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055491	Pprc1	ENSMUST00000099392	ENSMUSP00000096990	TRANSLATION	protein_coding	-	-	1	1204	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000055491	Pprc1	ENSMUST00000062322	ENSMUSP00000079389	TRANSLATION	protein_coding	-	-	1	1646	0	1.48	0.5	32.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000055491	Pprc1	ENSMUST00000146882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055491	Pprc1	ENSMUST00000126127	ENSMUSP00000121680	TRANSLATION	protein_coding	stop	-	3	120	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055491	Pprc1	ENSMUST00000150158	ENSMUSP00000120475	TRANSLATION	protein_coding	stop	-	3	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055491	Pprc1	ENSMUST00000134015	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055491	Pprc1	ENSMUST00000133101	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057240	Ms4a13	ENSMUST00000188464	ENSMUSP00000140293	TRANSLATION	protein_coding	-	CCDS84420.1	1	174	0	0	1.5	31.1	4	-3,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000057240	Ms4a13	ENSMUST00000073380	ENSMUSP00000073095	TRANSLATION	protein_coding	-	CCDS29595.1	1	203	0	0	0.5	31.1	4	-3,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000067525	Olfr1427	ENSMUST00000087825	ENSMUSP00000085127	TRANSLATION	protein_coding	-	CCDS29621.1	-	311	0	0.36	8.8	160.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000067525	Olfr1427	ENSMUST00000215374	ENSMUSP00000149787	TRANSLATION	protein_coding	-	CCDS29621.1	5	311	0	0.36	8.8	160.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000067525	Olfr1427	ENSMUST00000216845	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067525	Olfr1427	ENSMUST00000216069	ENSMUSP00000150457	TRANSLATION	protein_coding	-	CCDS29621.1	5	311	0	0.36	8.8	160.8	6	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000059363	Fxn	ENSMUST00000132688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059363	Fxn	ENSMUST00000081333	ENSMUSP00000080081	TRANSLATION	protein_coding	-	CCDS29711.1	1	207	0	3.88	1.5	128.2	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000059363	Fxn	ENSMUST00000123684	ENSMUSP00000117047	TRANSLATION	nonsense_mediated_decay	-	-	1	145	0	1.96	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000024669	Cd5	ENSMUST00000025571	ENSMUSP00000025571	TRANSLATION	protein_coding	-	CCDS29586.1	1	494	0	2.96	0.5	37.7	1	0,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000024669	Cd5	ENSMUST00000235856	ENSMUSP00000157817	TRANSLATION	protein_coding	start	-	-	129	0	0	0	0	1	-2,-5	-	-	-1	MINOR
ENSMUSG00000024669	Cd5	ENSMUST00000237397	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024669	Cd5	ENSMUST00000238167	ENSMUSP00000158313	TRANSLATION	protein_coding	-	-	-	449	0	2.54	0	37.7	1	0,-3	-	-	11.148	ALTERNATIVE:2
ENSMUSG00000047733	Tmem262	ENSMUST00000149347	ENSMUSP00000116436	TRANSLATION	protein_coding	stop	-	1	110	0	0	0	133.1	0	1,-4	-	-	-1	MINOR
ENSMUSG00000047733	Tmem262	ENSMUST00000143303	ENSMUSP00000121339	TRANSLATION	protein_coding	-	CCDS50363.1	1	116	0	0	5.1	0	0	1,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000038754	Elovl3	ENSMUST00000043739	ENSMUSP00000036357	TRANSLATION	protein_coding	-	-	1	248	0	0	0.5	215.3	7	-2,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038754	Elovl3	ENSMUST00000237098	ENSMUSP00000157465	TRANSLATION	protein_coding	-	CCDS29871.1	-	271	0	0	1.5	215	7	-4,-7	-	-	5.982	PRINCIPAL:2
ENSMUSG00000079478	Znrd2	ENSMUST00000159008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079478	Znrd2	ENSMUST00000160141	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079478	Znrd2	ENSMUST00000159693	ENSMUSP00000123867	TRANSLATION	protein_coding	-	-	3	88	2	0	0	35.8	0	-4,-5	-	-	5.6	MINOR
ENSMUSG00000079478	Znrd2	ENSMUST00000025885	ENSMUSP00000025885	TRANSLATION	protein_coding	-	CCDS29479.1	1	199	4	0	6.3	59.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079478	Znrd2	ENSMUST00000162976	ENSMUSP00000125679	TRANSLATION	protein_coding	start	-	3	59	4	0	0	39.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000013663	Pten	ENSMUST00000154806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013663	Pten	ENSMUST00000140014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013663	Pten	ENSMUST00000013807	ENSMUSP00000013807	TRANSLATION	protein_coding	-	CCDS29753.1	1	403	7	6	11.8	190	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024737	Slc15a3	ENSMUST00000138263	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024737	Slc15a3	ENSMUST00000138380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024737	Slc15a3	ENSMUST00000131010	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024737	Slc15a3	ENSMUST00000025646	ENSMUSP00000025646	TRANSLATION	protein_coding	-	CCDS29588.1	1	578	0	3.34	0.5	258.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000071649	B3gat3	ENSMUST00000096243	ENSMUSP00000093962	TRANSLATION	protein_coding	-	CCDS29558.1	1	335	20	4.9	8.8	231.9	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000071649	B3gat3	ENSMUST00000237071	ENSMUSP00000157531	TRANSLATION	nonsense_mediated_decay	-	-	-	229	3	0.4	0	0	0	-1,-5	-	-	-1	MINOR
ENSMUSG00000071649	B3gat3	ENSMUST00000235193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000124334	ENSMUSP00000114895	TRANSLATION	protein_coding	-	CCDS29467.1	1	551	3	14.38	1.5	88.2	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000024906	Mus81	ENSMUST00000126471	ENSMUSP00000121435	TRANSLATION	nonsense_mediated_decay	-	-	5	97	0	1.596	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024906	Mus81	ENSMUST00000140365	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000147961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000144422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000025841	ENSMUSP00000025841	TRANSLATION	nonsense_mediated_decay	-	-	1	502	3	12.88	0	88.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024906	Mus81	ENSMUST00000154215	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024906	Mus81	ENSMUST00000133436	ENSMUSP00000118580	TRANSLATION	nonsense_mediated_decay	start	-	5	389	3	9.88	0	88.2	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024906	Mus81	ENSMUST00000149908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000237708	ENSMUSP00000158270	TRANSLATION	protein_coding	start	-	-	130	0	4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024906	Mus81	ENSMUST00000151932	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024906	Mus81	ENSMUST00000146661	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041731	Pgm5	ENSMUST00000150339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041731	Pgm5	ENSMUST00000047666	ENSMUSP00000036025	TRANSLATION	protein_coding	-	CCDS29714.1	1	567	13	10.75	12.9	248.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000041731	Pgm5	ENSMUST00000129127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041731	Pgm5	ENSMUST00000133692	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050957	Insl6	ENSMUST00000052380	ENSMUSP00000054488	TRANSLATION	protein_coding	-	CCDS29732.1	1	191	0	0	0.5	43.2	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000050815	Olfr1441	ENSMUST00000214153	ENSMUSP00000150555	TRANSLATION	protein_coding	-	CCDS29630.1	5	318	0	0	2.7	176.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050815	Olfr1441	ENSMUST00000216506	ENSMUSP00000150739	TRANSLATION	protein_coding	-	CCDS29630.1	5	318	0	0	2.7	176.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050815	Olfr1441	ENSMUST00000059033	ENSMUSP00000061963	TRANSLATION	protein_coding	-	CCDS29630.1	-	318	0	0	2.7	176.4	6	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050121	Opalin	ENSMUST00000087176	ENSMUSP00000084422	TRANSLATION	protein_coding	-	CCDS37985.1	1	143	0	0	6.3	0	0	-4,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000050121	Opalin	ENSMUST00000236184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067529	Olfr1423	ENSMUST00000087831	ENSMUSP00000085134	TRANSLATION	protein_coding	-	CCDS29618.1	-	310	0	0.48	8.8	163.2	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000067529	Olfr1423	ENSMUST00000214472	ENSMUSP00000150649	TRANSLATION	protein_coding	-	CCDS29618.1	5	310	0	0.48	8.8	163.2	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025184	R3hcc1l	ENSMUST00000026188	ENSMUSP00000026188	TRANSLATION	protein_coding	-	CCDS29829.1	1	775	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000025184	R3hcc1l	ENSMUST00000160893	ENSMUSP00000125554	TRANSLATION	protein_coding	stop	-	5	195	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025184	R3hcc1l	ENSMUST00000161422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025184	R3hcc1l	ENSMUST00000162238	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025184	R3hcc1l	ENSMUST00000160107	ENSMUSP00000124036	TRANSLATION	protein_coding	-	-	2	195	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000084957	Bbip1	ENSMUST00000236885	ENSMUSP00000158555	TRANSLATION	protein_coding	-	CCDS57147.1	-	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000135402	ENSMUSP00000136324	TRANSLATION	protein_coding	-	CCDS57147.1	1	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000236900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084957	Bbip1	ENSMUST00000235688	ENSMUSP00000157634	TRANSLATION	protein_coding	-	CCDS57147.1	-	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000235348	ENSMUSP00000157613	TRANSLATION	protein_coding	-	CCDS57147.1	-	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000236370	ENSMUSP00000158142	TRANSLATION	protein_coding	-	CCDS57147.1	-	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000236127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000084957	Bbip1	ENSMUST00000236098	ENSMUSP00000158055	TRANSLATION	protein_coding	-	CCDS57147.1	-	67	0	0	2.5	111.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000084957	Bbip1	ENSMUST00000237049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025002	Cyp2c55	ENSMUST00000025966	ENSMUSP00000025966	TRANSLATION	protein_coding	-	CCDS29790.1	1	490	34	9	3.9	511.4	0	2,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000048292	Olfr1417	ENSMUST00000061235	ENSMUSP00000062542	TRANSLATION	protein_coding	-	CCDS29614.1	-	315	0	0.36	2.7	179.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048292	Olfr1417	ENSMUST00000214887	ENSMUSP00000149141	TRANSLATION	protein_coding	-	CCDS29614.1	5	315	0	0.36	2.7	179.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000048292	Olfr1417	ENSMUST00000213141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054874	Pcnx3	ENSMUST00000137313	ENSMUSP00000115217	TRANSLATION	protein_coding	start/stop	-	3	280	0	0	0	0	7	3,-2	-	-	-1	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000127876	ENSMUSP00000123696	TRANSLATION	protein_coding	start/stop	-	3	240	0	0	0	0	5	-4,-2	-	-	-1	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000145270	ENSMUSP00000116493	TRANSLATION	protein_coding	start/stop	-	1	712	0	0	0	0	13	-4,-7	-	-	-1	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000068169	ENSMUSP00000063786	TRANSLATION	protein_coding	-	-	1	1620	0	0	0	381.9	17	-2,-5	-	-	6	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000133136	ENSMUSP00000123666	TRANSLATION	nonsense_mediated_decay	start	-	5	129	0	0	0	201	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000132420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054874	Pcnx3	ENSMUST00000146638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054874	Pcnx3	ENSMUST00000135119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054874	Pcnx3	ENSMUST00000141577	ENSMUSP00000116451	TRANSLATION	protein_coding	start/stop	-	3	254	0	0	0	0	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000054874	Pcnx3	ENSMUST00000124905	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054874	Pcnx3	ENSMUST00000113615	ENSMUSP00000109245	TRANSLATION	protein_coding	-	CCDS29475.2	1	2028	0	0	6.3	381.9	17	-2,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000054874	Pcnx3	ENSMUST00000147161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071662	Polr2g	ENSMUST00000236566	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071662	Polr2g	ENSMUST00000096261	ENSMUSP00000093980	TRANSLATION	protein_coding	-	CCDS29547.1	1	172	0	4.66	15.5	128.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000071662	Polr2g	ENSMUST00000235964	ENSMUSP00000158073	TRANSLATION	protein_coding	-	-	-	69	0	2.33	0	34.4	0	-4,-5	-	-	1.692	MINOR
ENSMUSG00000071662	Polr2g	ENSMUST00000237207	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025176	Hoga1	ENSMUST00000172244	ENSMUSP00000126037	TRANSLATION	protein_coding	-	-	5	158	2	3	0	0	0	-4,-2	-	-	1.332	MINOR
ENSMUSG00000025176	Hoga1	ENSMUST00000081714	ENSMUSP00000080414	TRANSLATION	protein_coding	-	CCDS29820.1	1	321	9	7	1.5	0	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025176	Hoga1	ENSMUST00000167381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025176	Hoga1	ENSMUST00000168414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044441	Olfr1442	ENSMUST00000207341	ENSMUSP00000147051	TRANSLATION	protein_coding	-	CCDS29634.1	3	312	0	0.16	3.9	165	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044441	Olfr1442	ENSMUST00000208494	ENSMUSP00000146803	TRANSLATION	protein_coding	-	CCDS29634.1	3	312	0	0.16	3.9	165	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044441	Olfr1442	ENSMUST00000208657	ENSMUSP00000146650	TRANSLATION	protein_coding	-	CCDS29634.1	3	312	0	0.16	3.9	165	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000044441	Olfr1442	ENSMUST00000057924	ENSMUSP00000050632	TRANSLATION	protein_coding	-	CCDS29634.1	-	312	0	0.16	3.9	165	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000024843	Chka	ENSMUST00000072055	ENSMUSP00000071933	TRANSLATION	protein_coding	-	CCDS29400.1	1	435	26	10.63	1.5	269.1	0	-3,-4	-	-	16.998	PRINCIPAL:3
ENSMUSG00000024843	Chka	ENSMUST00000125411	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000125013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000139655	ENSMUSP00000116427	TRANSLATION	nonsense_mediated_decay	start	-	5	163	5	2.8	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000024843	Chka	ENSMUST00000125859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000128694	ENSMUSP00000119919	TRANSLATION	nonsense_mediated_decay	-	-	1	164	5	2.63	0	0	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000024843	Chka	ENSMUST00000146463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000127544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024843	Chka	ENSMUST00000154467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000153343	ENSMUSP00000115861	TRANSLATION	nonsense_mediated_decay	-	-	3	76	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024843	Chka	ENSMUST00000148325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024843	Chka	ENSMUST00000125640	ENSMUSP00000119493	TRANSLATION	protein_coding	start/stop	-	5	230	13	5	0	159.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024843	Chka	ENSMUST00000124219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024843	Chka	ENSMUST00000025760	ENSMUSP00000025760	TRANSLATION	protein_coding	-	CCDS70913.1	5	453	26	11.13	2.7	264.5	0	-3,-4	-	-	17.724	ALTERNATIVE:2
ENSMUSG00000071646	Mta2	ENSMUST00000096240	ENSMUSP00000093959	TRANSLATION	protein_coding	-	CCDS29561.1	1	668	4	7.1	7.5	198.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000071646	Mta2	ENSMUST00000132463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071646	Mta2	ENSMUST00000135300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071646	Mta2	ENSMUST00000151386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071646	Mta2	ENSMUST00000169535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071646	Mta2	ENSMUST00000137956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018821	Avpi1	ENSMUST00000018965	ENSMUSP00000018965	TRANSLATION	protein_coding	-	CCDS29822.1	1	142	0	0	0.5	99.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000018821	Avpi1	ENSMUST00000161873	ENSMUSP00000124617	TRANSLATION	protein_coding	stop	-	3	79	0	0	0	99.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024786	Majin	ENSMUST00000113528	ENSMUSP00000109156	TRANSLATION	protein_coding	-	CCDS50364.1	1	256	0	0	0.5	424.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024786	Majin	ENSMUST00000025699	ENSMUSP00000025699	TRANSLATION	protein_coding	-	-	1	124	0	0	0.5	160.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024769	Cdc42bpg	ENSMUST00000025681	ENSMUSP00000025681	TRANSLATION	protein_coding	-	CCDS50365.1	5	1551	16	8.2	1.5	488.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024769	Cdc42bpg	ENSMUST00000141854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054843	Atrnl1	ENSMUST00000077282	ENSMUSP00000076514	TRANSLATION	protein_coding	-	CCDS29928.1	1	1378	2	5.855	2.9	321.4	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000024990	Rbp4	ENSMUST00000237287	ENSMUSP00000157796	TRANSLATION	protein_coding	stop	-	-	122	8	2	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024990	Rbp4	ENSMUST00000236283	ENSMUSP00000157743	TRANSLATION	protein_coding	stop	-	-	104	13	2.75	0	27.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024990	Rbp4	ENSMUST00000025951	ENSMUSP00000025951	TRANSLATION	protein_coding	-	CCDS50430.1	1	245	23	4.58	0.5	68.9	0	-4,-2	-	-	18	MINOR
ENSMUSG00000024990	Rbp4	ENSMUST00000112335	ENSMUSP00000107954	TRANSLATION	protein_coding	-	CCDS29784.1	1	201	23	4.58	5.1	68.9	0	4,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000108889	Olfr1555-ps1	ENSMUST00000219261	ENSMUSP00000151777	TRANSLATION	protein_coding	-	-	5	321	0	0.24	2.2	179.9	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000108889	Olfr1555-ps1	ENSMUST00000207679	ENSMUSP00000146540	TRANSLATION	protein_coding	-	-	5	321	0	0.24	2.2	179.9	5	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025192	Entpd7	ENSMUST00000152786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025192	Entpd7	ENSMUST00000081079	ENSMUSP00000079864	TRANSLATION	protein_coding	-	CCDS29835.1	1	606	7	3.62	4.2	347.9	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000025192	Entpd7	ENSMUST00000134481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025192	Entpd7	ENSMUST00000144314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025192	Entpd7	ENSMUST00000131293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024666	Tmem138	ENSMUST00000236185	ENSMUSP00000158212	TRANSLATION	protein_coding	-	-	-	225	0	0	0	107.1	4	-3,-5	-	-	2.742	MINOR
ENSMUSG00000024666	Tmem138	ENSMUST00000236958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024666	Tmem138	ENSMUST00000235990	ENSMUSP00000157691	TRANSLATION	nonsense_mediated_decay	-	-	-	59	0	0	0	0	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000024666	Tmem138	ENSMUST00000236099	ENSMUSP00000157715	TRANSLATION	protein_coding	-	CCDS29581.1	-	162	0	0	19.3	161.4	4	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024666	Tmem138	ENSMUST00000025568	ENSMUSP00000025568	TRANSLATION	protein_coding	-	CCDS29581.1	1	162	0	0	19.3	161.4	4	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024660	Incenp	ENSMUST00000237655	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024660	Incenp	ENSMUST00000237725	ENSMUSP00000158216	TRANSLATION	protein_coding	stop	-	-	172	0	1	0	61.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024660	Incenp	ENSMUST00000235358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024660	Incenp	ENSMUST00000025562	ENSMUSP00000025562	TRANSLATION	protein_coding	-	CCDS37912.1	1	876	0	3.1	0.5	131	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000024660	Incenp	ENSMUST00000237439	ENSMUSP00000157547	TRANSLATION	protein_coding	-	-	-	880	0	3.1	0.5	131	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024660	Incenp	ENSMUST00000237147	ENSMUSP00000157801	TRANSLATION	protein_coding	stop	-	-	138	0	1	0	61.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024660	Incenp	ENSMUST00000236533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024660	Incenp	ENSMUST00000238004	ENSMUSP00000158010	TRANSLATION	protein_coding	start	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024660	Incenp	ENSMUST00000238129	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025049	Taf5	ENSMUST00000026027	ENSMUSP00000026027	TRANSLATION	protein_coding	-	CCDS29886.1	1	801	3	6.12	2.7	361.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000046585	Cfap58	ENSMUST00000238163	ENSMUSP00000158257	TRANSLATION	protein_coding	-	-	-	147	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000046585	Cfap58	ENSMUST00000066308	ENSMUSP00000070533	TRANSLATION	protein_coding	-	CCDS50466.1	1	873	0	0	5.1	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000067526	Olfr1425	ENSMUST00000087828	ENSMUSP00000085130	TRANSLATION	protein_coding	start	-	-	312	0	0.42	3.9	161.5	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000067526	Olfr1425	ENSMUST00000214918	ENSMUSP00000151154	TRANSLATION	protein_coding	-	CCDS84423.1	5	311	0	0.42	2.7	161.5	6	-4,-6	-	-	12.586	PRINCIPAL:1
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000235730	ENSMUSP00000157612	TRANSLATION	protein_coding	-	-	-	762	0	5.3452	1.5	288.8	0	-4,-2	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000049295	ENSMUSP00000037656	TRANSLATION	protein_coding	-	CCDS50359.1	1	1718	0	5.3452	0.5	288.8	0	-4,-2	-	-	11.598	PRINCIPAL:4
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000237081	ENSMUSP00000158523	TRANSLATION	protein_coding	stop	-	-	744	0	2.3	0	151	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000236215	ENSMUSP00000157990	TRANSLATION	protein_coding	-	-	-	877	0	5.3452	0.5	288.8	0	-4,-2	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000237367	ENSMUSP00000157445	TRANSLATION	nonsense_mediated_decay	start	-	-	61	0	0.6	0	28.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000237868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024937	Ehbp1l1	ENSMUST00000075606	ENSMUSP00000126740	TRANSLATION	protein_coding	-	CCDS50360.1	1	774	0	5.5452	1.5	288.8	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000036961	Wnt8b	ENSMUST00000237970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036961	Wnt8b	ENSMUST00000041163	ENSMUSP00000042867	TRANSLATION	protein_coding	-	CCDS50446.1	1	368	0	4.33	1.5	320.6	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024691	Fam111a	ENSMUST00000025595	ENSMUSP00000025595	TRANSLATION	protein_coding	-	CCDS29632.1	1	613	2	0	0.5	69.3	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000024691	Fam111a	ENSMUST00000144662	ENSMUSP00000119518	TRANSLATION	protein_coding	-	CCDS29632.1	5	613	2	0	0.5	69.3	0	-4,-5	-	-	8	PRINCIPAL:3
ENSMUSG00000024691	Fam111a	ENSMUST00000139270	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024691	Fam111a	ENSMUST00000151307	ENSMUSP00000123598	TRANSLATION	protein_coding	-	CCDS84424.1	5	569	2	0	0.5	69.3	0	-4,-6	-	-	8	ALTERNATIVE:2
ENSMUSG00000024776	Stambpl1	ENSMUST00000239240	ENSMUSP00000159218	TRANSLATION	protein_coding	-	CCDS29756.1	-	436	8	7	6.3	128.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024776	Stambpl1	ENSMUST00000125232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024776	Stambpl1	ENSMUST00000054956	ENSMUSP00000059927	TRANSLATION	protein_coding	-	CCDS29756.1	1	436	8	7	6.3	128.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024776	Stambpl1	ENSMUST00000130756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024776	Stambpl1	ENSMUST00000119603	ENSMUSP00000112938	TRANSLATION	protein_coding	-	CCDS29756.1	1	436	8	7	6.3	128.9	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024776	Stambpl1	ENSMUST00000129535	ENSMUSP00000115333	TRANSLATION	protein_coding	stop	-	5	112	0	1.75	0	56.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096485	Olfr1466	ENSMUST00000075868	ENSMUSP00000075265	TRANSLATION	protein_coding	-	CCDS29656.1	-	310	0	0	2.7	165.9	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096485	Olfr1466	ENSMUST00000207124	ENSMUSP00000147188	TRANSLATION	protein_coding	-	CCDS29656.1	3	310	0	0	2.7	165.9	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000034108	Ccs	ENSMUST00000235216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034108	Ccs	ENSMUST00000235245	ENSMUSP00000158065	TRANSLATION	protein_coding	-	-	-	228	9	6.67	0	140.3	0	-4,-6	-	-	14.838	MINOR
ENSMUSG00000034108	Ccs	ENSMUST00000238136	ENSMUSP00000158019	TRANSLATION	nonsense_mediated_decay	start	-	-	86	2	1.83	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034108	Ccs	ENSMUST00000037246	ENSMUSP00000035486	TRANSLATION	protein_coding	-	CCDS29438.1	1	274	9	8.25	7.5	140.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000034108	Ccs	ENSMUST00000236567	ENSMUSP00000158087	TRANSLATION	nonsense_mediated_decay	-	-	-	123	2	2.99	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034108	Ccs	ENSMUST00000236178	ENSMUSP00000158377	TRANSLATION	protein_coding	-	-	-	228	9	6.67	0	133.7	0	-4,-6	-	-	14.442	MINOR
ENSMUSG00000034108	Ccs	ENSMUST00000236977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034108	Ccs	ENSMUST00000235425	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034108	Ccs	ENSMUST00000236451	ENSMUSP00000158490	TRANSLATION	protein_coding	-	-	-	267	9	7.92	0	140.3	0	-4,-6	-	-	17.34	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000169099	ENSMUSP00000125889	TRANSLATION	nonsense_mediated_decay	start	-	5	387	0	0	0	185.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000166203	ENSMUSP00000132582	TRANSLATION	protein_coding	-	-	5	1692	7	1.75	0	372.2	0	-4,-5	-	-	15.936	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000040711	ENSMUSP00000048364	TRANSLATION	protein_coding	-	CCDS29914.1	1	1693	7	1.75	1.5	383.6	0	-4,-5	-	-	16.62	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000095947	ENSMUSP00000093640	TRANSLATION	protein_coding	-	-	5	1611	0	0	0.5	349	0	-4,-5	-	-	2.544	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000167239	ENSMUSP00000128196	TRANSLATION	protein_coding	-	-	5	1485	7	1.75	0	358	0	-4,-5	-	-	15.084	MINOR
ENSMUSG00000049134	Nrap	ENSMUST00000073536	ENSMUSP00000073228	TRANSLATION	protein_coding	-	CCDS29913.1	1	1728	7	1.75	1.5	406.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063904	Dpp3	ENSMUST00000236782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063904	Dpp3	ENSMUST00000236955	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063904	Dpp3	ENSMUST00000236496	ENSMUSP00000157895	TRANSLATION	protein_coding	start/stop	-	-	185	0	5.16	0	166.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063904	Dpp3	ENSMUST00000237394	ENSMUSP00000158386	TRANSLATION	protein_coding	stop	-	-	191	0	4.66	0	22.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063904	Dpp3	ENSMUST00000025851	ENSMUSP00000025851	TRANSLATION	protein_coding	-	CCDS29443.1	1	738	4	17.07	1.5	774.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000063904	Dpp3	ENSMUST00000236758	ENSMUSP00000157448	TRANSLATION	protein_coding	stop	-	-	153	0	3.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063904	Dpp3	ENSMUST00000235781	ENSMUSP00000158453	TRANSLATION	nonsense_mediated_decay	-	-	-	455	0	10.976	0	404.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063904	Dpp3	ENSMUST00000235777	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063904	Dpp3	ENSMUST00000235191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063904	Dpp3	ENSMUST00000237930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024678	Ms4a4d	ENSMUST00000025581	ENSMUSP00000025581	TRANSLATION	protein_coding	-	CCDS29602.1	1	225	0	0	0.5	57.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024789	Jak2	ENSMUST00000025705	ENSMUSP00000025705	TRANSLATION	protein_coding	-	CCDS37950.1	5	1132	2	23.05	7.5	521.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024789	Jak2	ENSMUST00000236990	ENSMUSP00000158405	TRANSLATION	protein_coding	stop	-	-	638	0	12.3	0	90.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024789	Jak2	ENSMUST00000238009	ENSMUSP00000158242	TRANSLATION	protein_coding	-	CCDS37950.1	-	1132	2	23.05	7.5	521.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024789	Jak2	ENSMUST00000065796	ENSMUSP00000064394	TRANSLATION	protein_coding	-	CCDS37950.1	5	1132	2	23.05	7.5	521.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000062844	Olfr1458	ENSMUST00000076729	ENSMUSP00000076019	TRANSLATION	protein_coding	-	-	-	301	0	0	0	170.4	6	-4,-5	-	-	6	MINOR
ENSMUSG00000062844	Olfr1458	ENSMUST00000215160	ENSMUSP00000149865	TRANSLATION	protein_coding	-	-	5	307	0	0.132	2.7	170.4	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025217	Btrc	ENSMUST00000225898	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025217	Btrc	ENSMUST00000224318	ENSMUSP00000153427	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000025217	Btrc	ENSMUST00000224053	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025217	Btrc	ENSMUST00000111936	ENSMUSP00000107567	TRANSLATION	protein_coding	-	CCDS38002.1	1	569	0	11.25	10.8	258.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000025217	Btrc	ENSMUST00000223684	ENSMUSP00000152926	TRANSLATION	protein_coding	stop	-	-	54	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025217	Btrc	ENSMUST00000224102	ENSMUSP00000153661	TRANSLATION	protein_coding	-	-	-	150	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025217	Btrc	ENSMUST00000224478	ENSMUSP00000153562	TRANSLATION	protein_coding	-	-	-	506	0	11.25	7.6	258.4	0	-4,-5	-	-	14.019	ALTERNATIVE:1
ENSMUSG00000025217	Btrc	ENSMUST00000223764	ENSMUSP00000153119	TRANSLATION	protein_coding	stop	-	-	111	0	2.5	0	87.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025217	Btrc	ENSMUST00000224439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025217	Btrc	ENSMUST00000225662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025217	Btrc	ENSMUST00000065601	ENSMUSP00000070728	TRANSLATION	protein_coding	-	CCDS29860.1	1	605	0	11.25	9.6	258.4	0	-4,-5	-	-	14.634	PRINCIPAL:3
ENSMUSG00000049303	Syt12	ENSMUST00000128114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049303	Syt12	ENSMUST00000059295	ENSMUSP00000055237	TRANSLATION	protein_coding	-	CCDS29428.1	1	421	0	3.6	7.5	84.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000049303	Syt12	ENSMUST00000133222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049303	Syt12	ENSMUST00000166191	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000117924	Tmem223	ENSMUST00000010248	ENSMUSP00000010248	TRANSLATION	protein_coding	-	CCDS29544.1	1	199	0	0	1.5	203.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000040385	Ppp1ca	ENSMUST00000236718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040385	Ppp1ca	ENSMUST00000237734	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040385	Ppp1ca	ENSMUST00000237096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040385	Ppp1ca	ENSMUST00000236181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040385	Ppp1ca	ENSMUST00000236921	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040385	Ppp1ca	ENSMUST00000236168	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040385	Ppp1ca	ENSMUST00000235739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040385	Ppp1ca	ENSMUST00000046094	ENSMUSP00000039109	TRANSLATION	protein_coding	-	CCDS29421.1	1	330	10	6.5	14	217.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000067279	Ppp1r3c	ENSMUST00000087321	ENSMUSP00000084578	TRANSLATION	protein_coding	-	CCDS37968.1	1	317	0	0.6	7.5	118	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000037847	Nmrk1	ENSMUST00000159572	ENSMUSP00000125384	TRANSLATION	protein_coding	-	-	1	214	8	5.33	0	83.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000037847	Nmrk1	ENSMUST00000159061	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037847	Nmrk1	ENSMUST00000161080	ENSMUSP00000125565	TRANSLATION	nonsense_mediated_decay	-	-	5	38	0	0.33	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000037847	Nmrk1	ENSMUST00000042392	ENSMUSP00000037198	TRANSLATION	protein_coding	-	CCDS37931.1	1	195	8	5.33	1.5	83.5	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000037847	Nmrk1	ENSMUST00000237347	ENSMUSP00000158342	TRANSLATION	protein_coding	-	CCDS37931.1	-	195	8	5.33	1.5	83.5	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000037847	Nmrk1	ENSMUST00000162446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024712	Rfk	ENSMUST00000146171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024712	Rfk	ENSMUST00000136162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024712	Rfk	ENSMUST00000025617	ENSMUSP00000025617	TRANSLATION	protein_coding	-	CCDS29688.1	1	155	30	3.75	9.1	132.3	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000071629	Olfr1477	ENSMUST00000217001	ENSMUSP00000149565	TRANSLATION	protein_coding	-	CCDS29663.1	2	315	0	0	1.5	179.1	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071629	Olfr1477	ENSMUST00000214274	ENSMUSP00000150803	TRANSLATION	protein_coding	-	CCDS29663.1	5	315	0	0	1.5	179.1	6	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045098	Kmt5b	ENSMUST00000113972	ENSMUSP00000109605	TRANSLATION	protein_coding	-	CCDS50343.1	5	883	22	8.1	1.5	46.7	0	-4,-5	-	-	18.113	ALTERNATIVE:2
ENSMUSG00000045098	Kmt5b	ENSMUST00000113968	ENSMUSP00000109601	TRANSLATION	protein_coding	-	CCDS50345.1	1	327	22	7.9	0.5	47.1	0	-4,-5	-	-	17.598	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000113977	ENSMUSP00000109610	TRANSLATION	protein_coding	-	CCDS29399.1	5	860	22	7.27	0.5	46.7	0	-4,-5	-	-	16.29	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000176512	ENSMUSP00000135004	TRANSLATION	protein_coding	stop	-	3	93	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000113970	ENSMUSP00000109603	TRANSLATION	protein_coding	-	CCDS50344.1	1	394	22	8.1	4.1	46.9	0	-4,-5	-	-	18.976	PRINCIPAL:3
ENSMUSG00000045098	Kmt5b	ENSMUST00000052699	ENSMUSP00000060162	TRANSLATION	protein_coding	-	CCDS50344.1	5	394	22	8.1	4.1	46.9	0	-4,-5	-	-	18.976	ALTERNATIVE:2
ENSMUSG00000045098	Kmt5b	ENSMUST00000152935	ENSMUSP00000115984	TRANSLATION	protein_coding	stop	-	3	212	10	5.82	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000236012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045098	Kmt5b	ENSMUST00000177355	ENSMUSP00000135590	TRANSLATION	protein_coding	stop	-	5	110	1	1.99	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000176926	ENSMUSP00000135756	TRANSLATION	protein_coding	-	-	5	423	22	8.1	0	46.7	0	-4,-5	-	-	17.952	ALTERNATIVE:2
ENSMUSG00000045098	Kmt5b	ENSMUST00000237440	ENSMUSP00000158061	TRANSLATION	protein_coding	-	CCDS50345.1	-	327	22	7.9	0.5	47.1	0	-4,-5	-	-	17.598	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000135586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045098	Kmt5b	ENSMUST00000113973	ENSMUSP00000109606	TRANSLATION	protein_coding	-	CCDS50343.1	5	883	22	8.1	1.5	46.7	0	-4,-5	-	-	18.113	ALTERNATIVE:2
ENSMUSG00000045098	Kmt5b	ENSMUST00000176125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045098	Kmt5b	ENSMUST00000113974	ENSMUSP00000109607	TRANSLATION	protein_coding	-	CCDS29399.1	5	860	22	7.27	0.5	46.7	0	-4,-5	-	-	16.29	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000176407	ENSMUSP00000134897	TRANSLATION	protein_coding	stop	-	3	87	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000236861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045098	Kmt5b	ENSMUST00000005518	ENSMUSP00000005518	TRANSLATION	protein_coding	-	CCDS50345.1	5	327	22	7.9	0.5	47.1	0	-4,-5	-	-	17.598	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000176262	ENSMUSP00000135563	TRANSLATION	protein_coding	-	CCDS29399.1	5	860	22	7.27	0.5	46.7	0	-4,-5	-	-	16.29	MINOR
ENSMUSG00000045098	Kmt5b	ENSMUST00000155618	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045098	Kmt5b	ENSMUST00000235768	ENSMUSP00000157479	TRANSLATION	nonsense_mediated_decay	start	-	-	85	6	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095640	Olfr1434	ENSMUST00000207915	ENSMUSP00000147137	TRANSLATION	protein_coding	stop	-	3	126	0	0	0	68.9	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000095640	Olfr1434	ENSMUST00000207186	ENSMUSP00000146925	TRANSLATION	protein_coding	-	CCDS57138.1	3	312	0	0.4	7.5	184.4	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000095640	Olfr1434	ENSMUST00000208197	ENSMUSP00000146411	TRANSLATION	protein_coding	-	CCDS57138.1	-	312	0	0.4	7.5	184.4	7	-3,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041360	Pum3	ENSMUST00000237274	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041360	Pum3	ENSMUST00000235852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041360	Pum3	ENSMUST00000236585	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041360	Pum3	ENSMUST00000235297	ENSMUSP00000158485	TRANSLATION	protein_coding	start	-	-	404	0	7.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041360	Pum3	ENSMUST00000236041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041360	Pum3	ENSMUST00000076219	ENSMUSP00000075573	TRANSLATION	protein_coding	-	CCDS29723.1	1	648	0	13.5	7.5	168	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041360	Pum3	ENSMUST00000236705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041360	Pum3	ENSMUST00000235631	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041360	Pum3	ENSMUST00000236702	ENSMUSP00000157590	TRANSLATION	protein_coding	stop	-	-	91	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041360	Pum3	ENSMUST00000235859	ENSMUSP00000158369	TRANSLATION	nonsense_mediated_decay	-	-	-	300	0	4.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042248	Cyp2c37	ENSMUST00000049178	ENSMUSP00000045362	TRANSLATION	protein_coding	-	CCDS29799.1	1	490	33	9	0.5	529	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000058927	Gm10053	ENSMUST00000073080	ENSMUSP00000072829	TRANSLATION	protein_coding	-	-	-	105	27	1	21.5	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000024749	Tmc1	ENSMUST00000235546	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024749	Tmc1	ENSMUST00000236437	ENSMUSP00000158304	TRANSLATION	protein_coding	-	-	-	212	0	0	0	77.9	2	-4,-6	-	-	3.132	MINOR
ENSMUSG00000024749	Tmc1	ENSMUST00000039500	ENSMUSP00000040859	TRANSLATION	protein_coding	-	CCDS50403.1	1	757	0	0	0.5	125.7	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024749	Tmc1	ENSMUST00000235605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074733	Zfp950	ENSMUST00000143264	ENSMUSP00000145915	TRANSLATION	protein_coding	-	CCDS84461.1	1	64	0	1.75	1.5	77.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000148569	ENSMUSP00000145979	TRANSLATION	protein_coding	start	-	5	63	0	1.75	1.5	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000181469	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074733	Zfp950	ENSMUST00000205854	ENSMUSP00000145786	TRANSLATION	protein_coding	-	CCDS84462.1	3	75	0	1.75	1.5	77.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000180544	ENSMUSP00000146243	TRANSLATION	protein_coding	-	CCDS84463.1	3	609	73	5.35	0.5	415.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000074733	Zfp950	ENSMUST00000122927	ENSMUSP00000146206	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	1.75	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000178819	ENSMUSP00000145709	TRANSLATION	protein_coding	start/stop	-	-	57	8	1	0	46	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000127117	ENSMUSP00000146094	TRANSLATION	nonsense_mediated_decay	-	-	3	77	0	1.75	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000205712	ENSMUSP00000145648	TRANSLATION	nonsense_mediated_decay	-	-	5	124	7	3.1	0.5	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074733	Zfp950	ENSMUST00000127290	ENSMUSP00000145951	TRANSLATION	nonsense_mediated_decay	-	-	1	77	0	1.75	0	77.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071644	Eef1g	ENSMUST00000127480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071644	Eef1g	ENSMUST00000128626	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071644	Eef1g	ENSMUST00000122932	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071644	Eef1g	ENSMUST00000052248	ENSMUSP00000093955	TRANSLATION	protein_coding	-	CCDS29563.1	1	437	10	8.15	8.8	328.3	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000071644	Eef1g	ENSMUST00000135025	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071644	Eef1g	ENSMUST00000152076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024947	Men1	ENSMUST00000113502	ENSMUSP00000109130	TRANSLATION	protein_coding	-	CCDS50366.1	1	617	0	11.73	5.1	923.8	0	-4,-7	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000024947	Men1	ENSMUST00000079327	ENSMUSP00000078306	TRANSLATION	protein_coding	-	CCDS29502.1	1	611	0	11.73	6.3	923.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000024947	Men1	ENSMUST00000113504	ENSMUSP00000109132	TRANSLATION	protein_coding	-	CCDS29502.1	1	611	0	11.73	6.3	923.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000024947	Men1	ENSMUST00000166909	ENSMUSP00000133085	TRANSLATION	protein_coding	-	-	3	64	0	1.5	0	66.3	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000078137	ENSMUSP00000077272	TRANSLATION	protein_coding	-	CCDS50367.1	1	556	0	10.73	0.5	771.6	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000237909	ENSMUSP00000158389	TRANSLATION	protein_coding	stop	-	-	88	0	2	0	68.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000156154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024947	Men1	ENSMUST00000113500	ENSMUSP00000109128	TRANSLATION	protein_coding	-	CCDS29502.1	5	611	0	11.73	6.3	923.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000024947	Men1	ENSMUST00000238038	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024947	Men1	ENSMUST00000113503	ENSMUSP00000109131	TRANSLATION	protein_coding	-	-	5	616	0	11.73	3.6	914.6	0	-4,-7	-	-	12.43	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000170132	ENSMUSP00000126655	TRANSLATION	protein_coding	start/stop	-	3	135	0	3.43	0	251	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000056391	ENSMUSP00000058149	TRANSLATION	protein_coding	-	CCDS29502.1	1	611	0	11.73	6.3	923.8	0	-4,-7	-	-	14	PRINCIPAL:3
ENSMUSG00000024947	Men1	ENSMUST00000170292	ENSMUSP00000128607	TRANSLATION	nonsense_mediated_decay	start	-	3	108	0	1	0	88.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024947	Men1	ENSMUST00000113501	ENSMUSP00000109129	TRANSLATION	protein_coding	-	-	5	576	0	10.65	0	819.8	0	-4,-7	-	-	3.84	MINOR
ENSMUSG00000037071	Scd1	ENSMUST00000041331	ENSMUSP00000036936	TRANSLATION	protein_coding	-	CCDS29850.1	1	355	0	5.75	3.9	57.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000037071	Scd1	ENSMUST00000236824	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037071	Scd1	ENSMUST00000235741	ENSMUSP00000157730	TRANSLATION	protein_coding	stop	-	-	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095189	Olfr1472	ENSMUST00000077501	ENSMUSP00000076707	TRANSLATION	protein_coding	-	CCDS29660.1	-	314	0	0.3	1.5	173.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095189	Olfr1472	ENSMUST00000096201	ENSMUSP00000093915	TRANSLATION	protein_coding	-	CCDS29660.1	5	314	0	0.3	1.5	173.2	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094584	Ms4a18	ENSMUST00000177684	ENSMUSP00000136529	TRANSLATION	protein_coding	-	CCDS57137.1	1	344	0	0	0.5	60.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025213	Kazald1	ENSMUST00000111948	ENSMUSP00000107579	TRANSLATION	protein_coding	-	CCDS29857.1	1	313	0	2.08	0.5	114.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000025213	Kazald1	ENSMUST00000026234	ENSMUSP00000026234	TRANSLATION	protein_coding	-	CCDS29857.1	1	313	0	2.08	0.5	114.7	0	1,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000054999	Naaladl1	ENSMUST00000044451	ENSMUSP00000044231	TRANSLATION	protein_coding	-	CCDS29494.1	2	745	10	16.06	1.5	191	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000056290	Ms4a4b	ENSMUST00000144135	ENSMUSP00000158171	TRANSLATION	nonsense_mediated_decay	start	-	5	64	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000056290	Ms4a4b	ENSMUST00000142135	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056290	Ms4a4b	ENSMUST00000152242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056290	Ms4a4b	ENSMUST00000035258	ENSMUSP00000046909	TRANSLATION	protein_coding	-	CCDS29600.1	1	226	0	0	0.5	63.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000056290	Ms4a4b	ENSMUST00000123758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056290	Ms4a4b	ENSMUST00000145160	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056290	Ms4a4b	ENSMUST00000136366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059105	Olfr1504	ENSMUST00000209192	ENSMUSP00000146610	TRANSLATION	protein_coding	-	CCDS29678.1	3	315	0	0	2.7	156	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000059105	Olfr1504	ENSMUST00000078282	ENSMUSP00000077400	TRANSLATION	protein_coding	-	CCDS29678.1	-	315	0	0	2.7	156	7	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071656	Lrrn4cl	ENSMUST00000235683	ENSMUSP00000157980	TRANSLATION	protein_coding	-	CCDS37909.1	-	239	0	0	0.5	32.2	1	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000071656	Lrrn4cl	ENSMUST00000096257	ENSMUSP00000093976	TRANSLATION	protein_coding	-	CCDS37909.1	1	239	0	0	0.5	32.2	1	2,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024818	Slc25a45	ENSMUST00000155697	ENSMUSP00000121596	TRANSLATION	protein_coding	-	CCDS29482.1	1	288	9	4.238	7.5	214.8	6	-3,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000024818	Slc25a45	ENSMUST00000141362	ENSMUSP00000114648	TRANSLATION	protein_coding	start	-	3	121	0	0.4	0	44.8	1	-3,-5	-	-	-1	MINOR
ENSMUSG00000024818	Slc25a45	ENSMUST00000125114	ENSMUSP00000122076	TRANSLATION	protein_coding	-	-	1	212	4	2.998	0	140	5	-3,-6	-	-	7.698	MINOR
ENSMUSG00000024818	Slc25a45	ENSMUST00000235340	ENSMUSP00000158189	TRANSLATION	protein_coding	-	-	-	230	9	2.728	1.7	147	5	-1,-4	-	-	11.238	MINOR
ENSMUSG00000024818	Slc25a45	ENSMUST00000145200	ENSMUSP00000117220	TRANSLATION	protein_coding	stop	-	3	195	9	2.128	0	110.5	5	-1,-4	-	-	-1	MINOR
ENSMUSG00000024818	Slc25a45	ENSMUST00000136833	ENSMUSP00000121602	TRANSLATION	protein_coding	stop	-	3	117	0	1.51	0	57.4	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000024818	Slc25a45	ENSMUST00000025732	ENSMUSP00000025732	TRANSLATION	protein_coding	-	CCDS29482.1	1	288	9	4.238	7.5	214.8	6	-3,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000040065	Pfpl	ENSMUST00000168148	ENSMUSP00000126346	TRANSLATION	protein_coding	-	CCDS50397.1	1	702	0	0	0.5	97.9	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000047368	Abhd17b	ENSMUST00000235332	ENSMUSP00000158374	TRANSLATION	protein_coding	-	-	-	162	0	0	0	0	0	-3,-6	-	-	0	MINOR
ENSMUSG00000047368	Abhd17b	ENSMUST00000236549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047368	Abhd17b	ENSMUST00000052556	ENSMUSP00000056099	TRANSLATION	protein_coding	-	CCDS29700.1	5	288	3	0	15.8	28.7	0	-3,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000010095	Slc3a2	ENSMUST00000206895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010095	Slc3a2	ENSMUST00000206598	ENSMUSP00000146016	TRANSLATION	protein_coding	-	-	2	303	3	6.24	0.5	0	0	-4,-5	-	-	3.798	MINOR
ENSMUSG00000010095	Slc3a2	ENSMUST00000170157	ENSMUSP00000130194	TRANSLATION	protein_coding	-	CCDS50381.1	1	565	3	8.84	0.5	158.9	4	-4,-5	-	-	14.856	ALTERNATIVE:2
ENSMUSG00000010095	Slc3a2	ENSMUST00000205463	ENSMUSP00000146036	TRANSLATION	protein_coding	start/stop	-	5	80	0	2.1996	0	33.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010095	Slc3a2	ENSMUST00000206797	ENSMUSP00000145892	TRANSLATION	protein_coding	stop	-	5	231	0	2.93	0	161.3	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000010095	Slc3a2	ENSMUST00000206560	ENSMUSP00000145809	TRANSLATION	protein_coding	stop	-	3	113	0	0	0	106	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000010095	Slc3a2	ENSMUST00000205377	ENSMUSP00000146080	TRANSLATION	protein_coding	start/stop	-	5	126	0	3.34	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010095	Slc3a2	ENSMUST00000010239	ENSMUSP00000010239	TRANSLATION	protein_coding	-	CCDS29540.1	1	526	3	8.84	0.5	158.9	4	-4,-5	-	-	14.856	PRINCIPAL:3
ENSMUSG00000010095	Slc3a2	ENSMUST00000205538	ENSMUSP00000145974	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	99.5	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000041362	Shtn1	ENSMUST00000047511	ENSMUSP00000041378	TRANSLATION	protein_coding	-	CCDS50481.1	1	631	0	0	1.5	0	0	-4,-5	-	-	0.188	MINOR
ENSMUSG00000041362	Shtn1	ENSMUST00000237215	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041362	Shtn1	ENSMUST00000163821	ENSMUSP00000126227	TRANSLATION	protein_coding	-	CCDS50480.1	1	456	0	0	6.3	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000024806	Mlana	ENSMUST00000235954	ENSMUSP00000158536	TRANSLATION	nonsense_mediated_decay	-	-	-	96	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024806	Mlana	ENSMUST00000025719	ENSMUSP00000025719	TRANSLATION	protein_coding	-	CCDS29739.1	1	113	0	0	1.5	156.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025218	Poll	ENSMUST00000026239	ENSMUSP00000026239	TRANSLATION	protein_coding	-	CCDS29861.1	1	573	12	5	1.5	323.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024805	Pcgf5	ENSMUST00000071267	ENSMUSP00000071245	TRANSLATION	protein_coding	-	CCDS29772.1	1	236	9	5.41	10.8	96.5	0	-4,-5	-	-	20.721	PRINCIPAL:2
ENSMUSG00000024805	Pcgf5	ENSMUST00000225050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024805	Pcgf5	ENSMUST00000225185	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024805	Pcgf5	ENSMUST00000224772	ENSMUSP00000153066	TRANSLATION	protein_coding	-	-	-	255	9	5.06	11.8	90.1	0	-4,-5	-	-	19.902	ALTERNATIVE:1
ENSMUSG00000024805	Pcgf5	ENSMUST00000225920	ENSMUSP00000153206	TRANSLATION	protein_coding	-	CCDS29772.1	-	236	9	5.41	10.8	96.5	0	-4,-5	-	-	20.721	PRINCIPAL:2
ENSMUSG00000024805	Pcgf5	ENSMUST00000225411	ENSMUSP00000153464	TRANSLATION	protein_coding	-	-	-	256	9	5.41	11.8	90.1	0	-4,-5	-	-	20.604	ALTERNATIVE:1
ENSMUSG00000024805	Pcgf5	ENSMUST00000224859	ENSMUSP00000153211	TRANSLATION	protein_coding	start	-	-	132	0	2.77	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024805	Pcgf5	ENSMUST00000224971	ENSMUSP00000153342	TRANSLATION	protein_coding	stop	-	-	125	9	3.29	0	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024805	Pcgf5	ENSMUST00000224679	ENSMUSP00000153681	TRANSLATION	protein_coding	-	-	-	256	9	5.41	11.8	90.1	0	-4,-5	-	-	20.604	ALTERNATIVE:1
ENSMUSG00000024805	Pcgf5	ENSMUST00000224805	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024805	Pcgf5	ENSMUST00000062389	ENSMUSP00000058730	TRANSLATION	protein_coding	-	CCDS29772.1	5	236	9	5.41	10.8	96.5	0	-4,-5	-	-	20.721	PRINCIPAL:2
ENSMUSG00000071659	Hnrnpul2	ENSMUST00000096753	ENSMUSP00000094515	TRANSLATION	protein_coding	-	CCDS37908.1	1	745	9	2.62	2.7	176.2	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000071659	Hnrnpul2	ENSMUST00000237237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000025739	ENSMUSP00000025739	TRANSLATION	protein_coding	-	CCDS37955.1	1	803	12	14.9	7.5	457.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000024817	Uhrf2	ENSMUST00000112552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000123773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000150532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000143769	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000127244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000137368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000134518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024817	Uhrf2	ENSMUST00000129420	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054237	Fra10ac1	ENSMUST00000238154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054237	Fra10ac1	ENSMUST00000067167	ENSMUSP00000070534	TRANSLATION	protein_coding	-	CCDS37972.1	1	315	0	0	6.3	176.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000054237	Fra10ac1	ENSMUST00000238007	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025198	Erlin1	ENSMUST00000112028	ENSMUSP00000107659	TRANSLATION	protein_coding	-	CCDS29842.2	1	348	0	0	6.3	74.6	0	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000025198	Erlin1	ENSMUST00000172041	ENSMUSP00000131012	TRANSLATION	protein_coding	stop	-	3	158	0	0	0	53.8	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025198	Erlin1	ENSMUST00000169092	ENSMUSP00000131740	TRANSLATION	protein_coding	stop	-	3	23	0	0	0	0	0	-2,-5	-	-	-1	MINOR
ENSMUSG00000025198	Erlin1	ENSMUST00000170577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025198	Erlin1	ENSMUST00000168602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025198	Erlin1	ENSMUST00000172262	ENSMUSP00000126271	TRANSLATION	protein_coding	start/stop	-	5	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025198	Erlin1	ENSMUST00000071698	ENSMUSP00000071618	TRANSLATION	protein_coding	-	CCDS29842.2	5	348	0	0	6.3	74.6	0	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000025198	Erlin1	ENSMUST00000170801	ENSMUSP00000129684	TRANSLATION	protein_coding	-	CCDS29842.2	1	348	0	0	6.3	74.6	0	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000025198	Erlin1	ENSMUST00000171952	ENSMUSP00000127971	TRANSLATION	nonsense_mediated_decay	-	-	5	69	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000025569	ENSMUSP00000025569	TRANSLATION	protein_coding	-	CCDS37913.1	1	87	0	0	6.3	75.5	2	-3,-5	-	-	5.664	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000059582	ENSMUSP00000059878	TRANSLATION	protein_coding	-	CCDS37913.1	1	87	0	0	6.3	75.5	2	-3,-5	-	-	5.664	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000236561	ENSMUSP00000158207	TRANSLATION	nonsense_mediated_decay	-	-	-	87	0	0	6.3	75.5	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000123788	ENSMUSP00000119596	TRANSLATION	nonsense_mediated_decay	-	-	3	141	0	0	9.2	113.4	4	-4,-5	-	-	-1	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000145210	ENSMUSP00000123397	TRANSLATION	nonsense_mediated_decay	-	-	1	87	0	0	6.3	75.5	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000024667	Tmem216	ENSMUST00000131205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024667	Tmem216	ENSMUST00000237507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024667	Tmem216	ENSMUST00000154383	ENSMUSP00000115319	TRANSLATION	protein_coding	-	CCDS70934.1	3	141	0	0	9.2	113.4	4	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000094755	Olfr1453	ENSMUST00000087773	ENSMUSP00000085071	TRANSLATION	protein_coding	-	CCDS29648.1	-	307	0	0.14	2.8	168.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024731	Ms4a10	ENSMUST00000190246	ENSMUSP00000140826	TRANSLATION	protein_coding	start	-	2	104	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024731	Ms4a10	ENSMUST00000191343	ENSMUSP00000140111	TRANSLATION	protein_coding	-	-	1	227	0	0	0.5	0	1	-4,-6	-	-	0	MINOR
ENSMUSG00000024731	Ms4a10	ENSMUST00000072748	ENSMUSP00000072531	TRANSLATION	protein_coding	-	CCDS37919.1	1	267	0	0	0.5	37.1	3	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024697	Gna14	ENSMUST00000237350	ENSMUSP00000158560	TRANSLATION	protein_coding	-	-	-	301	17	6	1.2	323.8	0	-4,-5	-	-	6.944	MINOR
ENSMUSG00000024697	Gna14	ENSMUST00000025602	ENSMUSP00000025602	TRANSLATION	protein_coding	-	CCDS29685.1	1	355	24	7.5	13	381.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024989	Cep55	ENSMUST00000237408	ENSMUSP00000157871	TRANSLATION	protein_coding	-	CCDS29782.1	-	461	3	1.75	1.5	65.1	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000024989	Cep55	ENSMUST00000116506	ENSMUSP00000112205	TRANSLATION	protein_coding	-	CCDS29782.1	5	461	3	1.75	1.5	65.1	0	-4,-7	-	-	15	PRINCIPAL:3
ENSMUSG00000024989	Cep55	ENSMUST00000236044	ENSMUSP00000157898	TRANSLATION	protein_coding	-	CCDS50429.1	-	462	3	1.75	1.5	65.1	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000024989	Cep55	ENSMUST00000169673	ENSMUSP00000127961	TRANSLATION	protein_coding	-	CCDS50429.1	1	462	3	1.75	1.5	65.1	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000024989	Cep55	ENSMUST00000235601	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024989	Cep55	ENSMUST00000096096	ENSMUSP00000093802	TRANSLATION	protein_coding	-	CCDS50429.1	1	462	3	1.75	1.5	65.1	0	-4,-7	-	-	15	ALTERNATIVE:2
ENSMUSG00000024726	Carnmt1	ENSMUST00000236401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024726	Carnmt1	ENSMUST00000025632	ENSMUSP00000025632	TRANSLATION	protein_coding	-	CCDS29689.1	1	400	17	0	1.5	383.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024726	Carnmt1	ENSMUST00000235736	ENSMUSP00000157942	TRANSLATION	nonsense_mediated_decay	-	-	-	68	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024778	Fas	ENSMUST00000236731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024778	Fas	ENSMUST00000112472	ENSMUSP00000108091	TRANSLATION	protein_coding	-	CCDS50420.1	1	63	0	0.8	0.5	0	0	1,-3	-	-	0	MINOR
ENSMUSG00000024778	Fas	ENSMUST00000025691	ENSMUSP00000025691	TRANSLATION	protein_coding	-	CCDS29758.1	1	327	0	5.21	0.5	115.3	0	1,-3	-	-	12	PRINCIPAL:2
ENSMUSG00000024778	Fas	ENSMUST00000235232	ENSMUSP00000158559	TRANSLATION	protein_coding	-	-	-	309	0	5.21	0	115.3	0	1,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000024778	Fas	ENSMUST00000235709	ENSMUSP00000158489	TRANSLATION	nonsense_mediated_decay	-	-	-	123	0	0.8	0	0	0	1,-3	-	-	-1	MINOR
ENSMUSG00000062624	Cyp2c67	ENSMUST00000067328	ENSMUSP00000065796	TRANSLATION	protein_coding	-	CCDS29796.1	1	491	33	8.8	0.5	499.4	0	2,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024758	Rtn3	ENSMUST00000235593	ENSMUSP00000158024	TRANSLATION	protein_coding	-	-	-	643	0	1.6	0.5	148.6	2	-4,-5	-	-	12	MINOR
ENSMUSG00000024758	Rtn3	ENSMUST00000065304	ENSMUSP00000065810	TRANSLATION	protein_coding	-	CCDS37906.1	1	964	0	1.6	0.5	148.6	2	-4,-5	-	-	12	MINOR
ENSMUSG00000024758	Rtn3	ENSMUST00000025667	ENSMUSP00000025667	TRANSLATION	protein_coding	-	CCDS70927.1	1	256	0	1.6	4.1	148.6	2	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000024758	Rtn3	ENSMUST00000088169	ENSMUSP00000085494	TRANSLATION	protein_coding	-	CCDS29526.1	5	237	0	1.6	6.3	148.6	2	-4,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000024758	Rtn3	ENSMUST00000088171	ENSMUSP00000085496	TRANSLATION	protein_coding	-	CCDS29525.1	1	945	0	1.6	0.5	148.6	2	-4,-5	-	-	12	MINOR
ENSMUSG00000087303	Lipo2	ENSMUST00000238164	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087303	Lipo2	ENSMUST00000147153	ENSMUSP00000118907	TRANSLATION	protein_coding	-	CCDS84434.1	5	398	6	7.3	1.5	73.4	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000087303	Lipo2	ENSMUST00000235430	-	NO_TRANSLATION	retained_intron
ENSMUSG00000087303	Lipo2	ENSMUST00000236408	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000092008	Cyp2c69	ENSMUST00000238049	ENSMUSP00000157553	TRANSLATION	nonsense_mediated_decay	-	-	-	165	5	2.8	0	106.6	0	3,-2	-	-	-1	MINOR
ENSMUSG00000092008	Cyp2c69	ENSMUST00000168838	ENSMUSP00000132832	TRANSLATION	protein_coding	-	CCDS50432.1	1	491	32	9.3	0.5	506.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000060556	Olfr1418	ENSMUST00000079875	ENSMUSP00000078800	TRANSLATION	protein_coding	-	CCDS29615.1	-	318	0	0.36	2.8	179	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000060556	Olfr1418	ENSMUST00000214796	ENSMUSP00000150146	TRANSLATION	protein_coding	-	CCDS29615.1	5	318	0	0.36	2.8	179	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071661	Zbtb3	ENSMUST00000172175	ENSMUSP00000127746	TRANSLATION	protein_coding	-	CCDS29548.1	1	518	7	0	1.5	104.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025190	Got1	ENSMUST00000133325	ENSMUSP00000117986	TRANSLATION	nonsense_mediated_decay	start	-	5	182	7	4.264	0	128.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025190	Got1	ENSMUST00000132504	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025190	Got1	ENSMUST00000124954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025190	Got1	ENSMUST00000026196	ENSMUSP00000026196	TRANSLATION	protein_coding	-	CCDS29832.1	1	413	14	9.33	9.5	313.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000049670	Morn4	ENSMUST00000237567	-	NO_TRANSLATION	retained_intron
ENSMUSG00000049670	Morn4	ENSMUST00000051772	ENSMUSP00000062887	TRANSLATION	protein_coding	-	CCDS37990.1	1	146	0	0.96	14.8	103.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025006	Sorbs1	ENSMUST00000226028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000165212	ENSMUSP00000126460	TRANSLATION	protein_coding	-	CCDS37978.1	5	724	0	5.85	0.5	226.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025006	Sorbs1	ENSMUST00000224233	ENSMUSP00000153080	TRANSLATION	protein_coding	stop	-	-	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225148	ENSMUSP00000153097	TRANSLATION	protein_coding	-	-	-	684	0	5.85	6.5	226.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000025006	Sorbs1	ENSMUST00000224583	ENSMUSP00000153450	TRANSLATION	protein_coding	stop	-	-	28	0	0	0	26.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225293	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000238831	ENSMUSP00000158996	TRANSLATION	protein_coding	-	-	-	1189	0	5.85	0	218.7	0	-4,-5	-	-	11.526	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000239304	ENSMUSP00000159211	TRANSLATION	protein_coding	start	-	-	1005	0	5.85	0	226.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000226047	ENSMUSP00000153489	TRANSLATION	protein_coding	-	-	-	695	0	5.85	0.5	226.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225153	ENSMUSP00000153313	TRANSLATION	protein_coding	-	CCDS37980.1	-	938	0	5.85	0.5	218.7	0	-4,-5	-	-	11.526	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225412	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025006	Sorbs1	ENSMUST00000224667	ENSMUSP00000153009	TRANSLATION	protein_coding	-	-	-	1290	0	5.85	0.5	226.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000225879	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025006	Sorbs1	ENSMUST00000225786	ENSMUSP00000153336	TRANSLATION	protein_coding	-	CCDS37981.1	-	714	0	5.85	0.5	226.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000224227	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000225628	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000224247	ENSMUSP00000152957	TRANSLATION	protein_coding	-	-	-	684	0	5.85	6.5	226.6	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000025006	Sorbs1	ENSMUST00000223724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025006	Sorbs1	ENSMUST00000225766	ENSMUSP00000159276	TRANSLATION	protein_coding	start/stop	-	-	352	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000099467	ENSMUSP00000097066	TRANSLATION	protein_coding	-	CCDS37980.1	5	938	0	5.85	0.5	218.7	0	-4,-5	-	-	11.526	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000099466	ENSMUSP00000097065	TRANSLATION	protein_coding	-	CCDS37979.1	5	740	0	5.85	6.5	226.6	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000025006	Sorbs1	ENSMUST00000225306	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000224646	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025006	Sorbs1	ENSMUST00000225593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025006	Sorbs1	ENSMUST00000225710	ENSMUSP00000153257	TRANSLATION	protein_coding	start	-	-	126	0	2.65	0	58.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025006	Sorbs1	ENSMUST00000165469	ENSMUSP00000125768	TRANSLATION	protein_coding	-	CCDS37981.1	5	714	0	5.85	0.5	226.6	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025189	Cnnm1	ENSMUST00000225254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025189	Cnnm1	ENSMUST00000225191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025189	Cnnm1	ENSMUST00000223787	ENSMUSP00000153472	TRANSLATION	protein_coding	-	-	-	972	14	1.4	3.9	106.9	4	-1,1	-	-	19	ALTERNATIVE:2
ENSMUSG00000025189	Cnnm1	ENSMUST00000165311	ENSMUSP00000131830	TRANSLATION	protein_coding	-	CCDS50442.1	1	951	14	1.4	2.9	106.9	4	-1,1	-	-	18.655	PRINCIPAL:2
ENSMUSG00000024943	Smc5	ENSMUST00000226111	ENSMUSP00000153420	TRANSLATION	protein_coding	-	-	-	1011	11	6.38	0.5	47.4	0	-4,-7	-	-	14.55	MINOR
ENSMUSG00000024943	Smc5	ENSMUST00000223934	ENSMUSP00000153364	TRANSLATION	protein_coding	-	CCDS37936.1	-	1087	13	6.62	3.9	62.8	0	-4,-7	-	-	18.778	PRINCIPAL:2
ENSMUSG00000024943	Smc5	ENSMUST00000224441	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024943	Smc5	ENSMUST00000224723	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024943	Smc5	ENSMUST00000087556	ENSMUSP00000084837	TRANSLATION	protein_coding	-	-	1	1101	13	6.62	3.9	65.2	0	-4,-7	-	-	19	ALTERNATIVE:2
ENSMUSG00000024943	Smc5	ENSMUST00000224008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071654	Uqcc3	ENSMUST00000096253	ENSMUSP00000093972	TRANSLATION	protein_coding	-	CCDS50383.1	1	89	0	0	3.9	132.2	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000025092	Hspa12a	ENSMUST00000236429	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025092	Hspa12a	ENSMUST00000235263	ENSMUSP00000158098	TRANSLATION	protein_coding	-	-	-	222	6	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025092	Hspa12a	ENSMUST00000235662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025092	Hspa12a	ENSMUST00000238055	ENSMUSP00000158170	TRANSLATION	protein_coding	start/stop	-	-	199	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025092	Hspa12a	ENSMUST00000236839	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025092	Hspa12a	ENSMUST00000237297	ENSMUSP00000157441	TRANSLATION	protein_coding	stop	-	-	227	6	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025092	Hspa12a	ENSMUST00000236453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025092	Hspa12a	ENSMUST00000237786	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025092	Hspa12a	ENSMUST00000066285	ENSMUSP00000066860	TRANSLATION	protein_coding	-	CCDS38032.1	1	675	22	1.43	6.3	0	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025092	Hspa12a	ENSMUST00000235791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024936	Kcnk7	ENSMUST00000235419	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024936	Kcnk7	ENSMUST00000052448	ENSMUSP00000051278	TRANSLATION	protein_coding	-	CCDS29477.1	1	343	0	2	0.5	85.9	4	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000024936	Kcnk7	ENSMUST00000236818	ENSMUSP00000157581	TRANSLATION	protein_coding	-	-	-	233	0	1.2	0.5	40.3	3	-1,-3	-	-	6.414	MINOR
ENSMUSG00000024998	Plce1	ENSMUST00000181994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024998	Plce1	ENSMUST00000182481	ENSMUSP00000138360	TRANSLATION	protein_coding	-	CCDS37973.1	5	2282	6	10.03	1.5	498.4	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000024998	Plce1	ENSMUST00000169713	ENSMUSP00000130604	TRANSLATION	protein_coding	-	CCDS37973.1	1	2282	6	10.03	1.5	498.4	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000024998	Plce1	ENSMUST00000182589	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024998	Plce1	ENSMUST00000182999	ENSMUSP00000138098	TRANSLATION	protein_coding	stop	-	3	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024998	Plce1	ENSMUST00000183131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024998	Plce1	ENSMUST00000182267	ENSMUSP00000138330	TRANSLATION	protein_coding	-	-	1	2296	6	10.03	1	498.4	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000010110	Stx5a	ENSMUST00000176844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176009	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000175642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176013	ENSMUSP00000135465	TRANSLATION	nonsense_mediated_decay	-	-	5	144	0	0	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000177322	ENSMUSP00000135624	TRANSLATION	nonsense_mediated_decay	-	-	5	101	0	0	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000175834	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176968	ENSMUSP00000135468	TRANSLATION	protein_coding	stop	-	2	109	0	1.2	0	61.9	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000175901	ENSMUSP00000134951	TRANSLATION	protein_coding	stop	-	5	262	0	0	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000073430	ENSMUSP00000073136	TRANSLATION	protein_coding	-	CCDS29542.2	1	355	0	1.2	0.5	110.7	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010110	Stx5a	ENSMUST00000176570	ENSMUSP00000134892	TRANSLATION	protein_coding	-	-	2	57	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000176182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176314	ENSMUSP00000135348	TRANSLATION	protein_coding	stop	-	3	77	0	0	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000176404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010110	Stx5a	ENSMUST00000176381	ENSMUSP00000134854	TRANSLATION	protein_coding	-	CCDS29542.2	1	355	0	1.2	0.5	110.7	1	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000010110	Stx5a	ENSMUST00000177373	ENSMUSP00000134794	TRANSLATION	protein_coding	-	-	5	259	0	1.2	0	61.9	1	-4,-7	-	-	9.072	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000010254	ENSMUSP00000010254	TRANSLATION	protein_coding	-	-	5	442	3	0.6	0	48.8	0	-4,-7	-	-	8.286	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000175872	ENSMUSP00000135416	TRANSLATION	nonsense_mediated_decay	-	-	5	234	0	0	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010110	Stx5a	ENSMUST00000176260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000025864	ENSMUSP00000025864	TRANSLATION	protein_coding	-	CCDS29471.1	1	166	0	4.66	1.5	88.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000127071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000136226	ENSMUSP00000117615	TRANSLATION	protein_coding	start	-	3	88	0	2	0	42.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000133953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000236461	ENSMUSP00000157589	TRANSLATION	protein_coding	start	-	-	153	0	4	0	88.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024925	Rnaseh2c	ENSMUST00000155639	ENSMUSP00000158448	TRANSLATION	protein_coding	start	-	2	168	0	3.5	0	88.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024695	Zfp91	ENSMUST00000038627	ENSMUSP00000037971	TRANSLATION	protein_coding	-	CCDS37927.1	1	572	20	3.25	1.5	55.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024695	Zfp91	ENSMUST00000137256	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024959	Bad	ENSMUST00000141410	ENSMUSP00000114597	TRANSLATION	protein_coding	start	-	2	161	0	0	0	197.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024959	Bad	ENSMUST00000025910	ENSMUSP00000025910	TRANSLATION	protein_coding	-	CCDS29513.1	1	204	0	0	1.5	299	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000024959	Bad	ENSMUST00000235240	ENSMUSP00000157664	TRANSLATION	protein_coding	-	CCDS70924.1	-	162	0	0	1.5	299	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024959	Bad	ENSMUST00000113426	ENSMUSP00000109053	TRANSLATION	protein_coding	-	-	5	178	0	0	0	202.6	0	-4,-7	-	-	0.216	MINOR
ENSMUSG00000024959	Bad	ENSMUST00000113423	ENSMUSP00000109050	TRANSLATION	protein_coding	-	CCDS70924.1	1	162	0	0	1.5	299	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024959	Bad	ENSMUST00000145463	ENSMUSP00000121778	TRANSLATION	protein_coding	start	-	3	63	0	0	0	32.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024959	Bad	ENSMUST00000237244	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024959	Bad	ENSMUST00000238184	ENSMUSP00000158059	TRANSLATION	protein_coding	-	CCDS70924.1	-	162	0	0	1.5	299	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024959	Bad	ENSMUST00000237334	ENSMUSP00000158399	TRANSLATION	protein_coding	-	-	-	131	0	0	0	202.5	0	-4,-5	-	-	0.21	MINOR
ENSMUSG00000024773	Atg2a	ENSMUST00000145600	ENSMUSP00000114998	TRANSLATION	protein_coding	start	-	1	1718	0	0	0	99.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024773	Atg2a	ENSMUST00000143053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024773	Atg2a	ENSMUST00000151079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024773	Atg2a	ENSMUST00000135018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024773	Atg2a	ENSMUST00000045351	ENSMUSP00000046412	TRANSLATION	protein_coding	-	CCDS29500.1	1	1914	0	0	1.5	160.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024773	Atg2a	ENSMUST00000237387	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047731	Wbp1l	ENSMUST00000156649	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047731	Wbp1l	ENSMUST00000132202	ENSMUSP00000121821	TRANSLATION	nonsense_mediated_decay	-	-	1	94	0	0	0	34.3	0	4,-1	-	-	-1	MINOR
ENSMUSG00000047731	Wbp1l	ENSMUST00000138302	ENSMUSP00000117929	TRANSLATION	protein_coding	-	CCDS29881.2	1	369	0	0	1.5	152.7	1	4,-1	-	-	6	PRINCIPAL:3
ENSMUSG00000047731	Wbp1l	ENSMUST00000175937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047731	Wbp1l	ENSMUST00000111855	ENSMUSP00000107486	TRANSLATION	protein_coding	-	CCDS50457.1	1	348	0	0	0.5	152.7	1	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000047731	Wbp1l	ENSMUST00000099376	ENSMUSP00000096975	TRANSLATION	protein_coding	-	CCDS50456.1	1	385	0	0	0.5	152.7	1	4,2	-	-	6	ALTERNATIVE:2
ENSMUSG00000024670	Cd6	ENSMUST00000080292	ENSMUSP00000079172	TRANSLATION	protein_coding	-	CCDS37917.1	1	665	4	3.95	1.5	208.6	1	1,-3	-	-	16	PRINCIPAL:3
ENSMUSG00000024670	Cd6	ENSMUST00000236355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024670	Cd6	ENSMUST00000174176	ENSMUSP00000134639	TRANSLATION	protein_coding	stop	-	5	327	4	2.95	0	137.2	1	1,-3	-	-	-1	MINOR
ENSMUSG00000024670	Cd6	ENSMUST00000039043	ENSMUSP00000046861	TRANSLATION	protein_coding	-	CCDS50391.1	1	626	4	3.95	1.5	208.6	1	1,-3	-	-	16	ALTERNATIVE:2
ENSMUSG00000024670	Cd6	ENSMUST00000025572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024670	Cd6	ENSMUST00000173613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074925	Ptar1	ENSMUST00000236951	ENSMUSP00000158406	TRANSLATION	protein_coding	start/stop	-	-	200	0	0.54	0	46.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074925	Ptar1	ENSMUST00000099560	ENSMUSP00000097156	TRANSLATION	protein_coding	-	-	5	66	0	0.3	0	31.8	0	-4,-5	-	-	3.834	MINOR
ENSMUSG00000074925	Ptar1	ENSMUST00000235740	ENSMUSP00000157451	TRANSLATION	nonsense_mediated_decay	-	-	-	66	0	0.3	0	31.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000074925	Ptar1	ENSMUST00000067077	ENSMUSP00000069426	TRANSLATION	protein_coding	-	-	-	112	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000074925	Ptar1	ENSMUST00000237333	ENSMUSP00000157782	TRANSLATION	protein_coding	-	CCDS50405.1	-	424	0	1.39	1.5	75.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000118346	Tmem179b	ENSMUST00000237634	ENSMUSP00000158384	TRANSLATION	nonsense_mediated_decay	-	-	-	74	0	0	0	0	0	2,-3	-	-	-1	MINOR
ENSMUSG00000118346	Tmem179b	ENSMUST00000235756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118346	Tmem179b	ENSMUST00000010249	ENSMUSP00000010249	TRANSLATION	protein_coding	-	CCDS29545.1	1	219	0	0	7.5	0	0	2,-3	-	-	3	PRINCIPAL:1
ENSMUSG00000024921	Smarca2	ENSMUST00000207535	ENSMUSP00000146464	TRANSLATION	nonsense_mediated_decay	start	-	5	93	0	1.63	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000207118	ENSMUSP00000146379	TRANSLATION	protein_coding	stop	-	3	228	0	5.192	0	75.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000175842	ENSMUSP00000135800	TRANSLATION	protein_coding	stop	-	2	211	0	4.928	0	75.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000209085	ENSMUSP00000146994	TRANSLATION	protein_coding	-	CCDS84428.1	5	276	0	5.192	9.2	75.1	0	0,-3	-	-	3	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000175935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000208915	ENSMUSP00000146432	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208226	ENSMUSP00000146630	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	0,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208712	ENSMUSP00000147244	TRANSLATION	protein_coding	stop	-	5	169	0	4.466	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208027	ENSMUSP00000146392	TRANSLATION	protein_coding	stop	-	5	296	0	5.492	0	74.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208705	ENSMUSP00000146971	TRANSLATION	protein_coding	stop	-	5	170	0	4.436	0	74.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176030	ENSMUSP00000135784	TRANSLATION	protein_coding	-	-	5	1601	9	19.652	0.5	524.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024921	Smarca2	ENSMUST00000208984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024921	Smarca2	ENSMUST00000207054	ENSMUSP00000146493	TRANSLATION	protein_coding	-	-	5	278	0	5.192	9.2	75.1	0	1,-3	-	-	3	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000207226	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000177116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000208674	ENSMUSP00000146770	TRANSLATION	protein_coding	start/stop	-	5	267	0	5.724	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176769	ENSMUSP00000135017	TRANSLATION	protein_coding	-	-	5	1525	9	18.552	0	438.2	0	-4,-5	-	-	10.638	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176494	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000208541	ENSMUSP00000146626	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000177484	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000112637	ENSMUSP00000108256	TRANSLATION	protein_coding	-	CCDS37945.1	1	236	0	4.994	0.5	75.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024921	Smarca2	ENSMUST00000176698	ENSMUSP00000134914	TRANSLATION	protein_coding	-	-	5	254	0	5.294	0	74.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208091	ENSMUSP00000146875	TRANSLATION	protein_coding	-	-	5	260	0	5.192	0	75.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000207380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000176731	ENSMUSP00000135460	TRANSLATION	nonsense_mediated_decay	start	-	5	299	0	3.894	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208589	ENSMUSP00000146890	TRANSLATION	protein_coding	-	CCDS37945.1	5	236	0	4.994	0.5	75.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000099537	ENSMUSP00000097135	TRANSLATION	nonsense_mediated_decay	-	-	1	1510	9	16.054	0	449.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176475	ENSMUSP00000135248	TRANSLATION	protein_coding	-	CCDS84428.1	5	276	0	5.192	9.2	75.1	0	0,-3	-	-	3	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000175791	ENSMUSP00000135412	TRANSLATION	protein_coding	-	-	3	254	0	5.294	0	74.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000175953	ENSMUSP00000135042	TRANSLATION	protein_coding	stop	-	3	149	0	4.136	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000207418	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000208806	ENSMUSP00000146442	TRANSLATION	protein_coding	stop	-	5	68	0	1.264	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000025862	ENSMUSP00000025862	TRANSLATION	protein_coding	-	CCDS29720.1	5	1583	9	19.352	0.5	519.2	0	-4,-5	-	-	17.1	PRINCIPAL:2
ENSMUSG00000024921	Smarca2	ENSMUST00000208751	ENSMUSP00000146924	TRANSLATION	protein_coding	-	CCDS37945.1	5	236	0	4.994	0.5	75.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000207944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024921	Smarca2	ENSMUST00000176700	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024921	Smarca2	ENSMUST00000207832	ENSMUSP00000146919	TRANSLATION	protein_coding	stop	-	5	229	0	5.192	0	75.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208163	ENSMUSP00000146859	TRANSLATION	protein_coding	stop	-	5	78	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000177252	ENSMUSP00000134995	TRANSLATION	protein_coding	stop	-	5	201	0	4.994	0	75.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208186	ENSMUSP00000146632	TRANSLATION	protein_coding	stop	-	5	244	0	5.492	0	74.5	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000176584	ENSMUSP00000135344	TRANSLATION	protein_coding	stop	-	3	173	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024921	Smarca2	ENSMUST00000207175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024921	Smarca2	ENSMUST00000207812	ENSMUSP00000146616	TRANSLATION	protein_coding	stop	-	5	200	0	4.664	0	75.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000024921	Smarca2	ENSMUST00000208303	ENSMUSP00000147173	TRANSLATION	protein_coding	start/stop	-	5	228	9	5.18	0	114.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024798	Htr7	ENSMUST00000164639	ENSMUSP00000126847	TRANSLATION	protein_coding	-	CCDS29769.1	1	448	0	3.3	6.3	249.1	8	-4,-6	-	-	14	PRINCIPAL:2
ENSMUSG00000024798	Htr7	ENSMUST00000099505	ENSMUSP00000097105	TRANSLATION	protein_coding	-	CCDS84436.1	5	470	0	3.3	1.5	249.1	8	-4,-6	-	-	12.188	MINOR
ENSMUSG00000024798	Htr7	ENSMUST00000164781	ENSMUSP00000131912	TRANSLATION	nonsense_mediated_decay	-	-	1	198	0	0.9	0	95.4	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000024798	Htr7	ENSMUST00000170360	ENSMUSP00000131517	TRANSLATION	nonsense_mediated_decay	-	-	5	344	0	1.4	0	144.2	6	-4,-6	-	-	-1	MINOR
ENSMUSG00000024798	Htr7	ENSMUST00000165215	ENSMUSP00000128386	TRANSLATION	nonsense_mediated_decay	-	-	1	198	0	0.9	0	95.4	4	-4,-6	-	-	-1	MINOR
ENSMUSG00000024798	Htr7	ENSMUST00000166074	ENSMUSP00000126150	TRANSLATION	protein_coding	-	-	5	435	0	3.3	5.1	249.1	8	-4,-6	-	-	13.548	ALTERNATIVE:1
ENSMUSG00000047207	Olfr1495	ENSMUST00000215930	ENSMUSP00000149223	TRANSLATION	protein_coding	-	CCDS29671.1	5	319	0	0.32	1.5	177.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047207	Olfr1495	ENSMUST00000061669	ENSMUSP00000057468	TRANSLATION	protein_coding	-	CCDS29671.1	-	319	0	0.32	1.5	177.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047207	Olfr1495	ENSMUST00000216980	ENSMUSP00000150205	TRANSLATION	protein_coding	-	CCDS29671.1	5	319	0	0.32	1.5	177.3	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000045864	ENSMUSP00000042660	TRANSLATION	protein_coding	-	-	1	427	0	5.38	0	144.1	0	-4,-5	-	-	9.204	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000236719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000235487	ENSMUSP00000158162	TRANSLATION	nonsense_mediated_decay	-	-	-	179	0	2.34	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000235450	ENSMUSP00000158437	TRANSLATION	protein_coding	-	CCDS37885.1	-	444	0	5.68	1.5	180.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000236780	ENSMUSP00000158519	TRANSLATION	nonsense_mediated_decay	-	-	-	179	0	2.34	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000237495	ENSMUSP00000158341	TRANSLATION	protein_coding	-	-	-	179	0	2.34	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000236890	ENSMUSP00000158002	TRANSLATION	nonsense_mediated_decay	-	-	-	192	0	3.42	0	63.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000237206	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000235782	ENSMUSP00000157997	TRANSLATION	nonsense_mediated_decay	-	-	-	189	0	2.52	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040247	Tbc1d10c	ENSMUST00000238094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024842	Cabp4	ENSMUST00000236648	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024842	Cabp4	ENSMUST00000236026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024842	Cabp4	ENSMUST00000025761	ENSMUSP00000025761	TRANSLATION	protein_coding	-	CCDS29416.1	1	271	14	4.06	1.5	86.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024842	Cabp4	ENSMUST00000236071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118124	Gm50139	ENSMUST00000237654	ENSMUSP00000158097	TRANSLATION	nonsense_mediated_decay,RT	start	-	-	120	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000024680	Ms4a2	ENSMUST00000186413	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024680	Ms4a2	ENSMUST00000164792	ENSMUSP00000127373	TRANSLATION	protein_coding	-	CCDS29604.1	1	235	0	0	0.5	112.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024680	Ms4a2	ENSMUST00000025583	ENSMUSP00000025583	TRANSLATION	protein_coding	-	CCDS70936.1	1	198	0	0	0.5	66.2	4	-4,-6	-	-	3.234	MINOR
ENSMUSG00000024680	Ms4a2	ENSMUST00000186978	ENSMUSP00000140628	TRANSLATION	protein_coding	-	CCDS79695.1	1	125	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024680	Ms4a2	ENSMUST00000189641	ENSMUSP00000139841	TRANSLATION	protein_coding	-	CCDS79694.1	3	202	0	0	0.5	66.2	4	-4,-6	-	-	3.234	MINOR
ENSMUSG00000024962	Vegfb	ENSMUST00000147924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024962	Vegfb	ENSMUST00000025914	ENSMUSP00000025914	TRANSLATION	protein_coding	-	CCDS29516.1	1	207	0	2.95	1.7	78.6	0	3,-4	-	-	9.078	MINOR
ENSMUSG00000024962	Vegfb	ENSMUST00000130048	ENSMUSP00000120860	TRANSLATION	protein_coding	-	CCDS50373.1	1	188	0	4.41	1.7	78.6	0	3,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000024757	Slc22a19	ENSMUST00000141771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024757	Slc22a19	ENSMUST00000138317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024757	Slc22a19	ENSMUST00000025666	ENSMUSP00000025666	TRANSLATION	protein_coding	-	CCDS29532.1	1	551	0	2.66	1.5	71.9	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000112952	ENSMUSP00000108575	TRANSLATION	protein_coding	-	CCDS29620.1	1	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000219155	ENSMUSP00000151635	TRANSLATION	protein_coding	-	CCDS29620.1	5	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000208703	ENSMUSP00000146619	TRANSLATION	protein_coding	-	CCDS29620.1	2	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000219996	ENSMUSP00000151454	TRANSLATION	protein_coding	-	CCDS29620.1	5	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000219005	ENSMUSP00000151226	TRANSLATION	protein_coding	-	CCDS29620.1	5	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000217952	ENSMUSP00000151331	TRANSLATION	protein_coding	-	CCDS29620.1	5	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044994	Olfr1426	ENSMUST00000220005	ENSMUSP00000151988	TRANSLATION	protein_coding	-	CCDS29620.1	5	311	0	0.42	8.8	166.9	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025017	Pik3ap1	ENSMUST00000235978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025017	Pik3ap1	ENSMUST00000059672	ENSMUSP00000052777	TRANSLATION	protein_coding	-	CCDS37987.1	1	811	0	1	0.5	178	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024975	Pdcd4	ENSMUST00000025931	ENSMUSP00000025931	TRANSLATION	protein_coding	-	CCDS29903.1	1	469	0	8.58	10.8	161.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024975	Pdcd4	ENSMUST00000235854	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024975	Pdcd4	ENSMUST00000165617	ENSMUSP00000133135	TRANSLATION	protein_coding	-	CCDS29903.1	1	469	0	8.58	10.8	161.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024975	Pdcd4	ENSMUST00000237699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024975	Pdcd4	ENSMUST00000074371	ENSMUSP00000073975	TRANSLATION	protein_coding	-	CCDS29903.1	1	469	0	8.58	10.8	161.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024975	Pdcd4	ENSMUST00000237060	ENSMUSP00000157883	TRANSLATION	nonsense_mediated_decay	-	-	-	319	0	3.75	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049498	Olfr1449	ENSMUST00000215325	ENSMUSP00000148934	TRANSLATION	protein_coding	-	CCDS29645.1	5	314	0	0.14	3.9	178.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049498	Olfr1449	ENSMUST00000208624	ENSMUSP00000146361	TRANSLATION	protein_coding	-	CCDS29645.1	3	314	0	0.14	3.9	178.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049498	Olfr1449	ENSMUST00000214079	ENSMUSP00000149217	TRANSLATION	protein_coding	-	CCDS29645.1	5	314	0	0.14	3.9	178.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000049498	Olfr1449	ENSMUST00000056005	ENSMUSP00000056181	TRANSLATION	protein_coding	-	CCDS29645.1	-	314	0	0.14	3.9	178.9	5	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000038843	Gcnt1	ENSMUST00000235184	ENSMUSP00000157544	TRANSLATION	protein_coding	-	CCDS29687.1	-	428	21	1	2.7	218.4	0	-2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038843	Gcnt1	ENSMUST00000169897	ENSMUSP00000127835	TRANSLATION	protein_coding	-	CCDS29687.1	3	428	21	1	2.7	218.4	0	-2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038843	Gcnt1	ENSMUST00000174236	ENSMUSP00000133935	TRANSLATION	protein_coding	-	CCDS29687.1	1	428	21	1	2.7	218.4	0	-2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038843	Gcnt1	ENSMUST00000236139	ENSMUSP00000157681	TRANSLATION	protein_coding	-	CCDS29687.1	-	428	21	1	2.7	218.4	0	-2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000038843	Gcnt1	ENSMUST00000174137	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025090	Ccdc172	ENSMUST00000069419	ENSMUSP00000068972	TRANSLATION	protein_coding	-	CCDS38029.1	1	267	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000025090	Ccdc172	ENSMUST00000235305	ENSMUSP00000158558	TRANSLATION	protein_coding	-	-	-	200	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000024663	Rab3il1	ENSMUST00000149967	ENSMUSP00000120401	TRANSLATION	protein_coding	-	-	2	430	0	7.51	2.4	0	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000024663	Rab3il1	ENSMUST00000137637	ENSMUSP00000120366	TRANSLATION	protein_coding	stop	-	3	57	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024663	Rab3il1	ENSMUST00000129882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024663	Rab3il1	ENSMUST00000121418	ENSMUSP00000113828	TRANSLATION	protein_coding	-	CCDS84417.1	1	314	0	7.51	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024663	Rab3il1	ENSMUST00000117641	ENSMUSP00000113551	TRANSLATION	protein_coding	-	CCDS84416.1	1	310	0	7.18	0.5	0	0	-4,-5	-	-	5.34	ALTERNATIVE:2
ENSMUSG00000024663	Rab3il1	ENSMUST00000144788	ENSMUSP00000121449	TRANSLATION	nonsense_mediated_decay	-	-	1	383	0	7.51	2.9	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024663	Rab3il1	ENSMUST00000238672	ENSMUSP00000158807	TRANSLATION	protein_coding	-	-	-	432	0	7.51	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000024663	Rab3il1	ENSMUST00000113161	ENSMUSP00000108786	TRANSLATION	protein_coding	-	CCDS29569.1	5	383	0	7.51	2.9	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000024663	Rab3il1	ENSMUST00000131407	ENSMUSP00000115976	TRANSLATION	protein_coding	stop	-	5	86	0	3.16	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033717	Adra2a	ENSMUST00000237285	ENSMUSP00000157421	TRANSLATION	protein_coding	-	CCDS29905.1	-	465	0	0.42	3.9	244.6	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000033717	Adra2a	ENSMUST00000036700	ENSMUSP00000036203	TRANSLATION	protein_coding	-	CCDS29905.1	-	465	0	0.42	3.9	244.6	7	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000025020	Slit1	ENSMUST00000171586	ENSMUSP00000126139	TRANSLATION	protein_coding	stop	-	5	380	0	9.1	0	225.5	0	0,-4	-	-	-1	MINOR
ENSMUSG00000025020	Slit1	ENSMUST00000169416	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025020	Slit1	ENSMUST00000025993	ENSMUSP00000025993	TRANSLATION	protein_coding	-	CCDS29812.1	1	1531	0	26.128	6.3	763.2	0	0,-4	-	-	14	PRINCIPAL:1
ENSMUSG00000025020	Slit1	ENSMUST00000166496	ENSMUSP00000128381	TRANSLATION	protein_coding	-	-	5	1458	0	26.128	0	763.2	0	0,-4	-	-	12	MINOR
ENSMUSG00000025020	Slit1	ENSMUST00000169141	ENSMUSP00000129034	TRANSLATION	protein_coding	-	-	5	1458	0	26.128	0	763.2	0	0,-4	-	-	12	MINOR
ENSMUSG00000024999	Noc3l	ENSMUST00000025963	ENSMUSP00000025963	TRANSLATION	protein_coding	-	CCDS37974.1	1	807	0	0	0.5	202.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045030	Olfr1443	ENSMUST00000213486	ENSMUSP00000148908	TRANSLATION	nonsense_mediated_decay	-	-	5	312	0	0.2	3.9	169.9	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000045030	Olfr1443	ENSMUST00000215134	ENSMUSP00000150063	TRANSLATION	protein_coding	-	CCDS29635.1	5	312	0	0.2	3.9	169.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000045030	Olfr1443	ENSMUST00000049724	ENSMUSP00000059886	TRANSLATION	protein_coding	-	CCDS29635.1	1	312	0	0.2	3.9	169.9	5	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000062892	Olfr1450	ENSMUST00000213587	ENSMUSP00000149761	TRANSLATION	protein_coding	-	CCDS29646.1	5	325	0	0.42	0.5	175	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062892	Olfr1450	ENSMUST00000213925	ENSMUSP00000150243	TRANSLATION	protein_coding	-	CCDS29646.1	5	325	0	0.42	0.5	175	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000062892	Olfr1450	ENSMUST00000082006	ENSMUSP00000080666	TRANSLATION	protein_coding	-	CCDS29646.1	-	325	0	0.42	0.5	175	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067519	Olfr262	ENSMUST00000087818	ENSMUSP00000085120	TRANSLATION	protein_coding	-	CCDS29625.1	-	312	0	0	7.5	186.4	0	-3,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000043789	Vwce	ENSMUST00000236323	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043789	Vwce	ENSMUST00000235831	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043789	Vwce	ENSMUST00000235938	ENSMUSP00000158303	TRANSLATION	nonsense_mediated_decay	start	-	-	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043789	Vwce	ENSMUST00000238148	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043789	Vwce	ENSMUST00000055115	ENSMUSP00000056958	TRANSLATION	protein_coding	-	CCDS50390.1	1	929	19	4.82	1.5	185.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000071648	Rom1	ENSMUST00000096242	ENSMUSP00000093961	TRANSLATION	protein_coding	-	CCDS29559.1	1	351	0	0	6.3	62.9	0	-1,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000034117	Ptgdr2	ENSMUST00000037261	ENSMUSP00000036159	TRANSLATION	protein_coding	-	CCDS29592.1	1	382	0	0.48	0.5	129.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025207	Sema4g	ENSMUST00000235970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025207	Sema4g	ENSMUST00000238104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025207	Sema4g	ENSMUST00000026225	ENSMUSP00000026225	TRANSLATION	protein_coding	-	CCDS29853.1	1	837	0	9.7	3.9	495.2	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000025207	Sema4g	ENSMUST00000237987	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025207	Sema4g	ENSMUST00000130549	ENSMUSP00000138321	TRANSLATION	nonsense_mediated_decay	-	-	5	837	0	9.7	3.9	495.2	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025207	Sema4g	ENSMUST00000236662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025207	Sema4g	ENSMUST00000235312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025207	Sema4g	ENSMUST00000179305	ENSMUSP00000137395	TRANSLATION	protein_coding	-	CCDS29853.1	1	837	0	9.7	3.9	495.2	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000067872	Ccdc87	ENSMUST00000088653	ENSMUSP00000086028	TRANSLATION	protein_coding	-	CCDS29439.1	-	855	0	0	0.5	51	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025069	Gsto2	ENSMUST00000120645	ENSMUSP00000113409	TRANSLATION	protein_coding	-	CCDS29894.1	1	248	11	5.5	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025069	Gsto2	ENSMUST00000237607	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025069	Gsto2	ENSMUST00000135016	ENSMUSP00000119680	TRANSLATION	protein_coding	-	CCDS29894.1	5	248	11	5.5	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025069	Gsto2	ENSMUST00000238084	ENSMUSP00000158414	TRANSLATION	protein_coding	-	-	-	214	11	4.5	0	63	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000025069	Gsto2	ENSMUST00000236449	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025069	Gsto2	ENSMUST00000235857	ENSMUSP00000158441	TRANSLATION	nonsense_mediated_decay	-	-	-	64	4	1.7	0	22.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025069	Gsto2	ENSMUST00000237514	ENSMUSP00000158279	TRANSLATION	protein_coding	-	-	-	192	11	4.5	0	63	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000025069	Gsto2	ENSMUST00000235896	ENSMUSP00000157838	TRANSLATION	protein_coding	-	-	-	214	11	4.5	0	63	0	-4,-5	-	-	16.002	MINOR
ENSMUSG00000025069	Gsto2	ENSMUST00000056159	ENSMUSP00000052592	TRANSLATION	protein_coding	-	CCDS29894.1	1	248	11	5.5	1.5	63	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024734	Zp1	ENSMUST00000168708	ENSMUSP00000128543	TRANSLATION	protein_coding	start	-	3	95	0	0.98	0	23.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024734	Zp1	ENSMUST00000025641	ENSMUSP00000025641	TRANSLATION	protein_coding	-	CCDS37918.1	1	623	0	3.2	0.5	178.4	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024955	Esrra	ENSMUST00000025906	ENSMUSP00000025906	TRANSLATION	protein_coding	-	CCDS29509.1	1	422	8	6.6	7.5	208.4	0	-4,-5	-	-	20.598	PRINCIPAL:1
ENSMUSG00000024955	Esrra	ENSMUST00000145192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024955	Esrra	ENSMUST00000172975	ENSMUSP00000133916	TRANSLATION	protein_coding	-	-	3	383	4	5.6	0	156.3	0	-4,-5	-	-	9.474	MINOR
ENSMUSG00000024955	Esrra	ENSMUST00000239322	ENSMUSP00000159237	TRANSLATION	protein_coding	-	-	-	499	8	6.8	1.5	208.4	0	-4,-1	-	-	18.231	MINOR
ENSMUSG00000024955	Esrra	ENSMUST00000173635	ENSMUSP00000134587	TRANSLATION	protein_coding	stop	-	5	161	0	2.8	0	58.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024955	Esrra	ENSMUST00000173308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000038658	Ric1	ENSMUST00000162184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038658	Ric1	ENSMUST00000161330	ENSMUSP00000125709	TRANSLATION	nonsense_mediated_decay	start	-	1	444	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038658	Ric1	ENSMUST00000162492	ENSMUSP00000124727	TRANSLATION	protein_coding	start	-	5	1314	0	0	0	272.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000038658	Ric1	ENSMUST00000160221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038658	Ric1	ENSMUST00000161536	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038658	Ric1	ENSMUST00000160452	ENSMUSP00000125299	TRANSLATION	nonsense_mediated_decay	start	-	1	163	0	0	0	189.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038658	Ric1	ENSMUST00000043610	ENSMUSP00000043437	TRANSLATION	protein_coding	-	CCDS37951.1	5	1422	0	0	5.1	272.3	0	-4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000044026	Slc35g1	ENSMUST00000054098	ENSMUSP00000061282	TRANSLATION	protein_coding	-	CCDS29787.1	1	368	0	0	1.5	20	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044026	Slc35g1	ENSMUST00000236865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024736	Tmem132a	ENSMUST00000235186	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024736	Tmem132a	ENSMUST00000120524	ENSMUSP00000113696	TRANSLATION	protein_coding	-	-	5	687	0	0	0	413.1	0	1,-2	-	-	0	MINOR
ENSMUSG00000024736	Tmem132a	ENSMUST00000238070	ENSMUSP00000158531	TRANSLATION	protein_coding	start/stop	-	-	128	0	0	0	50.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024736	Tmem132a	ENSMUST00000025645	ENSMUSP00000025645	TRANSLATION	protein_coding	-	CCDS29589.1	1	1018	0	0	1.5	564.7	0	1,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000056481	Cd248	ENSMUST00000070630	ENSMUSP00000070847	TRANSLATION	protein_coding	-	CCDS29448.1	-	765	6	0	0.5	70	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000108929	Cc2d2b	ENSMUST00000207165	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108929	Cc2d2b	ENSMUST00000207863	ENSMUSP00000146608	TRANSLATION	protein_coding	start/stop	-	5	121	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108929	Cc2d2b	ENSMUST00000207791	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000108929	Cc2d2b	ENSMUST00000207801	ENSMUSP00000146979	TRANSLATION	protein_coding	-	-	5	1061	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000108929	Cc2d2b	ENSMUST00000224596	ENSMUSP00000153384	TRANSLATION	protein_coding	-	-	-	1405	0	0	0	177.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000191580	ENSMUSP00000140369	TRANSLATION	nonsense_mediated_decay	start	-	5	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000159346	ENSMUSP00000124442	TRANSLATION	protein_coding	start/stop	-	5	274	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000161907	ENSMUSP00000139847	TRANSLATION	protein_coding	start	-	2	311	4	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000189779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000160561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053080	2700081O15Rik	ENSMUST00000159348	ENSMUSP00000123773	TRANSLATION	protein_coding	-	CCDS29524.2	5	678	8	0	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000011752	Pgam1	ENSMUST00000235468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000011752	Pgam1	ENSMUST00000237510	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000011752	Pgam1	ENSMUST00000011896	ENSMUSP00000011896	TRANSLATION	protein_coding	-	CCDS29815.1	1	254	13	4	17.5	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000046230	Vps13a	ENSMUST00000223667	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046230	Vps13a	ENSMUST00000068156	ENSMUSP00000068716	TRANSLATION	protein_coding	-	CCDS37929.1	2	3166	0	0	1.5	975.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046230	Vps13a	ENSMUST00000225899	ENSMUSP00000157588	TRANSLATION	protein_coding	start	-	-	148	0	0	0	57.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046230	Vps13a	ENSMUST00000225233	ENSMUSP00000152909	TRANSLATION	protein_coding	start	-	-	857	0	0	0	385.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000046230	Vps13a	ENSMUST00000223846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000224428	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000225764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000225079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000224149	ENSMUSP00000153129	TRANSLATION	nonsense_mediated_decay	-	-	-	2339	0	0	0	674.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046230	Vps13a	ENSMUST00000223897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000224725	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046230	Vps13a	ENSMUST00000225349	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024785	Rcl1	ENSMUST00000235900	ENSMUSP00000158152	TRANSLATION	protein_coding	-	-	-	337	0	6.01	0	317.6	0	-4,0	-	-	8.94	MINOR
ENSMUSG00000024785	Rcl1	ENSMUST00000064393	ENSMUSP00000067579	TRANSLATION	protein_coding	-	CCDS29731.1	1	373	0	7.05	11.6	333.9	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000069475	Gm6020	ENSMUST00000092094	ENSMUSP00000089726	TRANSLATION	protein_coding	start/stop	-	-	22	3	0	0	26.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000063698	Sfxn4	ENSMUST00000124921	ENSMUSP00000118708	TRANSLATION	nonsense_mediated_decay	-	-	1	115	0	0	0	43.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000063698	Sfxn4	ENSMUST00000080806	ENSMUSP00000079621	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	0	0	44.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063698	Sfxn4	ENSMUST00000135808	ENSMUSP00000118743	TRANSLATION	protein_coding	-	CCDS29943.1	1	313	0	0	1.5	217.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000090291	Lrrc10b	ENSMUST00000171400	ENSMUSP00000132865	TRANSLATION	protein_coding	-	CCDS50389.1	-	292	0	0.6	7.5	32.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000049562	Ap5b1	ENSMUST00000235542	ENSMUSP00000157409	TRANSLATION	protein_coding	stop	-	-	208	0	0	0	0	0	-3,-1	-	-	-1	MINOR
ENSMUSG00000049562	Ap5b1	ENSMUST00000235575	ENSMUSP00000157737	TRANSLATION	protein_coding	-	CCDS29470.1	-	876	0	0	2.7	0	0	-3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000049562	Ap5b1	ENSMUST00000096318	ENSMUSP00000094042	TRANSLATION	protein_coding	-	CCDS29470.1	1	876	0	0	2.7	0	0	-3,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000024768	Lipf	ENSMUST00000025680	ENSMUSP00000025680	TRANSLATION	protein_coding	-	CCDS29754.1	1	395	6	8.1	5.1	87.6	0	3,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000052942	Glis3	ENSMUST00000162873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052942	Glis3	ENSMUST00000112612	ENSMUSP00000108231	TRANSLATION	protein_coding	-	-	1	671	20	2.266	0	53.5	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000052942	Glis3	ENSMUST00000159178	ENSMUSP00000124823	TRANSLATION	protein_coding	stop	-	5	245	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052942	Glis3	ENSMUST00000160376	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052942	Glis3	ENSMUST00000161026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052942	Glis3	ENSMUST00000159520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052942	Glis3	ENSMUST00000159639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052942	Glis3	ENSMUST00000161328	ENSMUSP00000125721	TRANSLATION	protein_coding	stop	-	5	245	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000052942	Glis3	ENSMUST00000162022	ENSMUSP00000124635	TRANSLATION	protein_coding	-	CCDS37947.1	1	935	20	2.2	0.5	53.5	0	-4,-2	-	-	17.826	PRINCIPAL:2
ENSMUSG00000052942	Glis3	ENSMUST00000065113	ENSMUSP00000066953	TRANSLATION	nonsense_mediated_decay	-	-	1	142	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000117975	Itprip	ENSMUST00000095998	ENSMUSP00000093697	TRANSLATION	protein_coding	-	CCDS29895.1	1	555	0	0	1.5	57.7	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000117975	Itprip	ENSMUST00000237029	ENSMUSP00000157574	TRANSLATION	protein_coding	stop	-	-	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057506	Bloc1s2	ENSMUST00000237630	ENSMUSP00000158032	TRANSLATION	protein_coding	-	-	-	104	0	0	0	105.1	0	-4,-5	-	-	4.98	MINOR
ENSMUSG00000057506	Bloc1s2	ENSMUST00000236380	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057506	Bloc1s2	ENSMUST00000079033	ENSMUSP00000078042	TRANSLATION	protein_coding	-	CCDS50445.1	1	143	0	0	5.1	122.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000057506	Bloc1s2	ENSMUST00000237867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057506	Bloc1s2	ENSMUST00000237613	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024983	Vti1a	ENSMUST00000225529	ENSMUSP00000153392	TRANSLATION	protein_coding	-	-	-	197	0	5.2	0.5	167	0	-4,-5	-	-	11.202	MINOR
ENSMUSG00000024983	Vti1a	ENSMUST00000224396	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024983	Vti1a	ENSMUST00000225392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024983	Vti1a	ENSMUST00000226069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024983	Vti1a	ENSMUST00000225051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024983	Vti1a	ENSMUST00000095950	ENSMUSP00000093644	TRANSLATION	protein_coding	-	CCDS29910.1	1	217	0	5.6	10.1	167	1	-4,-5	-	-	14.934	PRINCIPAL:2
ENSMUSG00000024983	Vti1a	ENSMUST00000223690	ENSMUSP00000153629	TRANSLATION	protein_coding	-	-	-	224	0	5.6	10.3	167	1	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000025212	Sfxn3	ENSMUST00000084493	ENSMUSP00000081537	TRANSLATION	protein_coding	-	CCDS50447.1	1	281	0	0	0.5	357.4	1	-4,-6	-	-	0	MINOR
ENSMUSG00000025212	Sfxn3	ENSMUST00000237222	ENSMUSP00000158407	TRANSLATION	protein_coding	stop	-	-	110	0	0	0	156.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025212	Sfxn3	ENSMUST00000111954	ENSMUSP00000107585	TRANSLATION	protein_coding	-	CCDS50448.1	5	288	0	0	0.5	418.9	3	-4,-5	-	-	0.894	MINOR
ENSMUSG00000025212	Sfxn3	ENSMUST00000235155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025212	Sfxn3	ENSMUST00000236638	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025212	Sfxn3	ENSMUST00000062213	ENSMUSP00000059419	TRANSLATION	protein_coding	-	CCDS29856.1	1	321	0	0	17.5	504	3	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000052920	Prkg1	ENSMUST00000182527	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052920	Prkg1	ENSMUST00000182459	ENSMUSP00000158419	TRANSLATION	protein_coding	-	-	2	62	0	1.4	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052920	Prkg1	ENSMUST00000182401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052920	Prkg1	ENSMUST00000065067	ENSMUSP00000067576	TRANSLATION	protein_coding	-	CCDS29745.1	1	671	33	14.99	9.7	424.1	0	-4,-5	-	-	21.164	PRINCIPAL:1
ENSMUSG00000052920	Prkg1	ENSMUST00000183135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052920	Prkg1	ENSMUST00000239061	ENSMUSP00000159122	TRANSLATION	protein_coding	-	-	-	382	19	8.54	0	223.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000052920	Prkg1	ENSMUST00000182685	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052920	Prkg1	ENSMUST00000073581	ENSMUSP00000073268	TRANSLATION	protein_coding	-	CCDS29746.1	1	686	33	14.99	12	370.3	0	-4,-5	-	-	18.772	MINOR
ENSMUSG00000025171	Ubtd1	ENSMUST00000237817	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025171	Ubtd1	ENSMUST00000026170	ENSMUSP00000026170	TRANSLATION	protein_coding	-	CCDS29819.1	1	227	0	1.8	10.3	181.3	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047656	Trpt1	ENSMUST00000088223	ENSMUSP00000085555	TRANSLATION	protein_coding	-	CCDS50375.1	1	249	0	1.68	1.5	214.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000047656	Trpt1	ENSMUST00000237234	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039126	Prune2	ENSMUST00000223920	ENSMUSP00000153418	TRANSLATION	protein_coding	-	-	-	294	0	0	0	252.2	0	-4,-5	-	-	2.766	MINOR
ENSMUSG00000039126	Prune2	ENSMUST00000224117	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039126	Prune2	ENSMUST00000225351	ENSMUSP00000153135	TRANSLATION	protein_coding	-	-	-	323	0	0	2	254.6	0	-4,-5	-	-	2.91	MINOR
ENSMUSG00000039126	Prune2	ENSMUST00000226052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039126	Prune2	ENSMUST00000087689	ENSMUSP00000084977	TRANSLATION	protein_coding	-	CCDS50400.1	5	3084	0	2.13	0.5	306.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000039126	Prune2	ENSMUST00000224602	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039126	Prune2	ENSMUST00000224059	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039126	Prune2	ENSMUST00000224145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039126	Prune2	ENSMUST00000225838	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075289	Carns1	ENSMUST00000236513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075289	Carns1	ENSMUST00000167055	ENSMUSP00000131624	TRANSLATION	protein_coding	-	CCDS50350.1	5	947	18	0.385	3.9	0	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000075289	Carns1	ENSMUST00000237988	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075289	Carns1	ENSMUST00000235984	-	NO_TRANSLATION	retained_intron
ENSMUSG00000075289	Carns1	ENSMUST00000235912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075289	Carns1	ENSMUST00000237326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075289	Carns1	ENSMUST00000237815	ENSMUSP00000158521	TRANSLATION	protein_coding	start	-	-	65	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024871	Doc2g	ENSMUST00000138917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024871	Doc2g	ENSMUST00000147806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024871	Doc2g	ENSMUST00000127016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024871	Doc2g	ENSMUST00000236482	ENSMUSP00000158285	TRANSLATION	protein_coding	stop	-	-	196	0	3.85	0	48.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024871	Doc2g	ENSMUST00000235829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024871	Doc2g	ENSMUST00000025806	ENSMUSP00000025806	TRANSLATION	protein_coding	-	CCDS29409.1	1	387	7	8.35	1.5	117.6	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000046650	Olfr1440	ENSMUST00000054567	ENSMUSP00000054798	TRANSLATION	protein_coding	-	CCDS29629.1	-	315	0	0	4.1	174.9	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000046650	Olfr1440	ENSMUST00000216169	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046650	Olfr1440	ENSMUST00000214082	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046650	Olfr1440	ENSMUST00000216773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046650	Olfr1440	ENSMUST00000216145	ENSMUSP00000150994	TRANSLATION	protein_coding	-	CCDS29629.1	5	315	0	0	4.1	174.9	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000046650	Olfr1440	ENSMUST00000213657	ENSMUSP00000150691	TRANSLATION	protein_coding	-	CCDS29629.1	5	315	0	0	4.1	174.9	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000046650	Olfr1440	ENSMUST00000213894	ENSMUSP00000150365	TRANSLATION	nonsense_mediated_decay	-	-	5	315	0	0	4.1	174.9	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000046650	Olfr1440	ENSMUST00000217062	ENSMUSP00000148978	TRANSLATION	protein_coding	-	CCDS29629.1	2	315	0	0	4.1	174.9	5	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000099655	2310034G01Rik	ENSMUST00000189008	ENSMUSP00000153475	TRANSLATION	protein_coding	-	-	5	209	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000007338	Mrpl49	ENSMUST00000236833	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000007338	Mrpl49	ENSMUST00000236412	ENSMUSP00000157635	TRANSLATION	protein_coding	start	-	-	115	0	2.33	0	49.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000007338	Mrpl49	ENSMUST00000007482	ENSMUSP00000007482	TRANSLATION	protein_coding	-	CCDS29488.1	1	166	0	4.08	3.9	95.6	0	-3,1	-	-	13	PRINCIPAL:1
ENSMUSG00000007338	Mrpl49	ENSMUST00000235520	ENSMUSP00000157535	TRANSLATION	protein_coding	-	-	-	56	0	0.75	0	0	0	-4,0	-	-	0	MINOR
ENSMUSG00000024981	Acsl5	ENSMUST00000043150	ENSMUSP00000046585	TRANSLATION	protein_coding	-	CCDS29908.1	1	683	21	10.648	6.3	363.6	3	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024981	Acsl5	ENSMUST00000224337	ENSMUSP00000153474	TRANSLATION	nonsense_mediated_decay	-	-	-	95	0	0	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000024981	Acsl5	ENSMUST00000224414	ENSMUSP00000152972	TRANSLATION	protein_coding	start	-	-	96	0	0.96	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024981	Acsl5	ENSMUST00000225551	ENSMUSP00000153302	TRANSLATION	protein_coding	stop	-	-	117	0	0.93	0	0	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000024981	Acsl5	ENSMUST00000225454	ENSMUSP00000152956	TRANSLATION	protein_coding	start	-	-	62	0	1.23	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024981	Acsl5	ENSMUST00000226019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042041	2010003K11Rik	ENSMUST00000048482	ENSMUSP00000036729	TRANSLATION	protein_coding	-	CCDS29429.1	1	124	0	0	2.7	172.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024901	Peli3	ENSMUST00000133504	ENSMUSP00000157835	TRANSLATION	protein_coding	stop	-	3	70	0	2.08	0	94.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024901	Peli3	ENSMUST00000139436	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024901	Peli3	ENSMUST00000120475	ENSMUSP00000113193	TRANSLATION	protein_coding	-	CCDS84408.1	1	411	6	5.28	0.5	543.4	0	-4,-5	-	-	10.002	MINOR
ENSMUSG00000024901	Peli3	ENSMUST00000143930	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024901	Peli3	ENSMUST00000146289	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024901	Peli3	ENSMUST00000025834	ENSMUSP00000025834	TRANSLATION	protein_coding	-	CCDS37888.1	1	445	6	6.28	7.5	687	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024901	Peli3	ENSMUST00000133254	ENSMUSP00000118173	TRANSLATION	protein_coding	stop	-	2	155	0	3.68	0	164.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000086812	Gm8978	ENSMUST00000124230	ENSMUSP00000158516	TRANSLATION	protein_coding	-	-	5	399	6	7.7	1.5	71.5	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024791	Cdca5	ENSMUST00000025704	ENSMUSP00000025704	TRANSLATION	protein_coding	-	CCDS29493.1	1	264	0	0	0.5	88.7	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024791	Cdca5	ENSMUST00000156961	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024791	Cdca5	ENSMUST00000152528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079258	Calhm1	ENSMUST00000111813	ENSMUSP00000107444	TRANSLATION	protein_coding	-	CCDS38015.1	5	348	0	0	1.5	306	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024896	Minpp1	ENSMUST00000025827	ENSMUSP00000025827	TRANSLATION	protein_coding	-	CCDS29751.1	1	481	7	1.94	1.5	120.1	0	1,1	-	-	18	PRINCIPAL:1
ENSMUSG00000024896	Minpp1	ENSMUST00000236287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025094	Slc18a2	ENSMUST00000236270	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025094	Slc18a2	ENSMUST00000026084	ENSMUSP00000026084	TRANSLATION	protein_coding	-	CCDS29935.1	1	517	0	4.15	1.5	132.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000003559	As3mt	ENSMUST00000236473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003559	As3mt	ENSMUST00000235842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003559	As3mt	ENSMUST00000236465	ENSMUSP00000158498	TRANSLATION	nonsense_mediated_decay	-	-	-	99	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000003559	As3mt	ENSMUST00000003655	ENSMUSP00000003655	TRANSLATION	protein_coding	-	CCDS50458.1	1	376	16	7.34	4.1	113.5	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000003559	As3mt	ENSMUST00000236063	ENSMUSP00000157611	TRANSLATION	nonsense_mediated_decay	-	-	-	65	5	0.8	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000003559	As3mt	ENSMUST00000235266	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003559	As3mt	ENSMUST00000237219	ENSMUSP00000157523	TRANSLATION	protein_coding	-	-	-	273	9	5.04	0	65.9	0	-4,-5	-	-	5.874	MINOR
ENSMUSG00000067297	Ifit1bl2	ENSMUST00000087357	ENSMUSP00000093816	TRANSLATION	protein_coding	-	CCDS29765.1	1	466	0	0.932	0.5	41	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025202	Scd3	ENSMUST00000026220	ENSMUSP00000026220	TRANSLATION	protein_coding	-	CCDS29847.1	1	359	0	5.33	2.7	57.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025202	Scd3	ENSMUST00000237324	ENSMUSP00000157819	TRANSLATION	protein_coding	-	-	-	135	0	2	0	26.8	0	-2,-4	-	-	2.784	MINOR
ENSMUSG00000048456	Olfr1448	ENSMUST00000216888	ENSMUSP00000149296	TRANSLATION	protein_coding	-	CCDS29644.1	5	314	0	0.2	7.6	182.6	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048456	Olfr1448	ENSMUST00000054737	ENSMUSP00000055664	TRANSLATION	protein_coding	-	CCDS29644.1	-	314	0	0.2	7.6	182.6	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048456	Olfr1448	ENSMUST00000213177	ENSMUSP00000151134	TRANSLATION	protein_coding	-	CCDS29644.1	5	314	0	0.2	7.6	182.6	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000048456	Olfr1448	ENSMUST00000213713	ENSMUSP00000149191	TRANSLATION	protein_coding	-	CCDS29644.1	5	314	0	0.2	7.6	182.6	5	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000025089	Gfra1	ENSMUST00000135730	ENSMUSP00000121447	TRANSLATION	protein_coding	stop	-	2	8	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025089	Gfra1	ENSMUST00000026076	ENSMUSP00000026076	TRANSLATION	protein_coding	-	CCDS38028.1	1	468	0	9.16	5.1	150.1	0	2,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000025089	Gfra1	ENSMUST00000140141	ENSMUSP00000123022	TRANSLATION	nonsense_mediated_decay	-	-	1	419	0	7.66	0	150.1	0	2,-2	-	-	-1	MINOR
ENSMUSG00000025089	Gfra1	ENSMUST00000129100	ENSMUSP00000117196	TRANSLATION	protein_coding	-	CCDS70967.1	1	463	0	9.16	5.1	150.1	0	2,-2	-	-	14	ALTERNATIVE:1
ENSMUSG00000025089	Gfra1	ENSMUST00000152507	ENSMUSP00000120333	TRANSLATION	protein_coding	-	CCDS38028.1	5	468	0	9.16	5.1	150.1	0	2,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000025089	Gfra1	ENSMUST00000123957	ENSMUSP00000120058	TRANSLATION	protein_coding	stop	-	2	25	0	0.66	0	0	0	2,-1	-	-	-1	MINOR
ENSMUSG00000025089	Gfra1	ENSMUST00000138530	ENSMUSP00000115239	TRANSLATION	protein_coding	stop	-	3	54	0	1.58	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000025089	Gfra1	ENSMUST00000131877	ENSMUSP00000122810	TRANSLATION	protein_coding	stop	-	2	48	0	1.58	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000025089	Gfra1	ENSMUST00000169850	ENSMUSP00000130128	TRANSLATION	protein_coding	-	CCDS38028.1	1	468	0	9.16	5.1	150.1	0	2,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000013662	Atad1	ENSMUST00000070210	ENSMUSP00000069962	TRANSLATION	protein_coding	-	CCDS29752.1	1	361	13	6.5	13	124	1	-4,-7	-	-	21.976	PRINCIPAL:1
ENSMUSG00000013662	Atad1	ENSMUST00000235142	ENSMUSP00000157972	TRANSLATION	protein_coding	-	-	-	276	13	5.9	0	124.4	0	-4,-5	-	-	16.8	MINOR
ENSMUSG00000013662	Atad1	ENSMUST00000235412	ENSMUSP00000157842	TRANSLATION	protein_coding	-	CCDS29752.1	-	361	13	6.5	13	124	1	-4,-7	-	-	21.976	PRINCIPAL:1
ENSMUSG00000013662	Atad1	ENSMUST00000236011	ENSMUSP00000157772	TRANSLATION	protein_coding	-	CCDS29752.1	-	361	13	6.5	13	124	1	-4,-7	-	-	21.976	PRINCIPAL:1
ENSMUSG00000013662	Atad1	ENSMUST00000238016	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013662	Atad1	ENSMUST00000236701	ENSMUSP00000157709	TRANSLATION	nonsense_mediated_decay	-	-	-	303	11	5.34	0	124	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000013662	Atad1	ENSMUST00000236985	ENSMUSP00000158237	TRANSLATION	protein_coding	-	CCDS29752.1	-	361	13	6.5	13	124	1	-4,-7	-	-	21.976	PRINCIPAL:1
ENSMUSG00000013662	Atad1	ENSMUST00000236546	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000013662	Atad1	ENSMUST00000237933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000013662	Atad1	ENSMUST00000237752	ENSMUSP00000157803	TRANSLATION	protein_coding	-	-	-	322	13	6.1	0	124	1	-4,-7	-	-	17.178	MINOR
ENSMUSG00000052085	Dock8	ENSMUST00000235722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052085	Dock8	ENSMUST00000025831	ENSMUSP00000025831	TRANSLATION	protein_coding	-	CCDS37943.1	1	2100	0	9.66	3.9	946.4	0	-4,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000052085	Dock8	ENSMUST00000236576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052085	Dock8	ENSMUST00000237532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052085	Dock8	ENSMUST00000236471	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052085	Dock8	ENSMUST00000237705	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067229	Cyp2c66	ENSMUST00000087234	ENSMUSP00000084487	TRANSLATION	protein_coding	-	CCDS29792.1	1	490	34	9.5	0.5	520.5	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000067229	Cyp2c66	ENSMUST00000146494	ENSMUSP00000120397	TRANSLATION	nonsense_mediated_decay	-	-	1	68	0	1.25	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000016496	Cd274	ENSMUST00000016640	ENSMUSP00000016640	TRANSLATION	protein_coding	-	CCDS29735.1	1	290	0	2.9	5.1	59.7	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000067225	Cyp2c54	ENSMUST00000048959	ENSMUSP00000048284	TRANSLATION	protein_coding	-	CCDS29800.1	2	490	33	9	0.5	526.9	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111662	ENSMUSP00000107291	TRANSLATION	protein_coding	-	-	5	606	0	3.8	0	415.7	0	-4,-5	-	-	11.52	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111651	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111656	ENSMUSP00000107283	TRANSLATION	protein_coding	-	CCDS50471.1	1	459	0	4.04	7.3	415.7	0	-4,-5	-	-	14.487	ALTERNATIVE:1
ENSMUSG00000024985	Tcf7l2	ENSMUST00000142291	ENSMUSP00000118042	TRANSLATION	protein_coding	stop	-	3	178	0	0.75	0	129.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000145249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024985	Tcf7l2	ENSMUST00000127653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111657	ENSMUSP00000107284	TRANSLATION	protein_coding	-	CCDS50472.1	5	598	0	4.04	2.9	415.7	0	-4,-5	-	-	12.75	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111658	ENSMUSP00000107286	TRANSLATION	protein_coding	-	CCDS50469.1	1	435	0	3.698	0.5	413.9	0	-4,-5	-	-	11.208	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000041717	ENSMUSP00000042950	TRANSLATION	protein_coding	-	CCDS50473.1	1	442	0	3.8	8.6	415.7	0	-4,-5	-	-	14.52	ALTERNATIVE:1
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111659	ENSMUSP00000107287	TRANSLATION	protein_coding	-	CCDS50470.1	1	447	0	3.8	3.7	415.7	0	-4,-5	-	-	12.585	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111653	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000143334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024985	Tcf7l2	ENSMUST00000133008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000061496	ENSMUSP00000050081	TRANSLATION	protein_coding	-	CCDS29911.1	5	459	0	4.04	8.6	415.7	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111652	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000126434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111649	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024985	Tcf7l2	ENSMUST00000153888	ENSMUSP00000118661	TRANSLATION	protein_coding	-	-	5	477	0	3.8	1.2	413.9	0	-4,-5	-	-	11.49	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000127233	ENSMUSP00000123428	TRANSLATION	protein_coding	-	-	1	442	0	3.8	0.5	415.7	0	-4,-5	-	-	11.52	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000148666	ENSMUSP00000119759	TRANSLATION	protein_coding	stop	-	3	275	0	2.5	0	214.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024985	Tcf7l2	ENSMUST00000111646	ENSMUSP00000107273	TRANSLATION	protein_coding	-	CCDS50474.1	1	299	0	3.04	4.1	208.6	0	-4,-6	-	-	5.226	MINOR
ENSMUSG00000046272	Olfr1444	ENSMUST00000059675	ENSMUSP00000062460	TRANSLATION	protein_coding	-	CCDS29640.1	-	319	0	0	2.7	180.9	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000046272	Olfr1444	ENSMUST00000213606	ENSMUSP00000150212	TRANSLATION	protein_coding	-	CCDS29640.1	5	319	0	0	2.7	180.9	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000056858	Olfr1502	ENSMUST00000074221	ENSMUSP00000073843	TRANSLATION	protein_coding	-	CCDS29677.1	-	316	0	0	3.9	145.4	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000024771	Lipk	ENSMUST00000224738	ENSMUSP00000153550	TRANSLATION	nonsense_mediated_decay	-	-	-	37	0	0.6	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000024771	Lipk	ENSMUST00000054260	ENSMUSP00000053913	TRANSLATION	protein_coding	-	CCDS57143.1	1	403	6	8.1	1.5	95.6	0	2,-1	-	-	18	PRINCIPAL:2
ENSMUSG00000024771	Lipk	ENSMUST00000225505	ENSMUSP00000152955	TRANSLATION	protein_coding	-	-	-	398	6	8.1	2.7	95.6	0	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000012443	Kif11	ENSMUST00000236027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000012443	Kif11	ENSMUST00000012587	ENSMUSP00000012587	TRANSLATION	protein_coding	-	CCDS29777.1	1	1052	12	8.92	1.5	532	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025227	Mfsd13a	ENSMUST00000128455	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025227	Mfsd13a	ENSMUST00000128041	ENSMUSP00000119072	TRANSLATION	protein_coding	-	CCDS29877.1	1	519	0	0	5.1	77.5	8	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000025227	Mfsd13a	ENSMUST00000086969	ENSMUSP00000084189	TRANSLATION	protein_coding	-	CCDS29877.1	1	519	0	0	5.1	77.5	8	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000025227	Mfsd13a	ENSMUST00000137143	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025227	Mfsd13a	ENSMUST00000142994	ENSMUSP00000122944	TRANSLATION	nonsense_mediated_decay	-	-	1	320	0	0	1	31.7	7	0,-4	-	-	-1	MINOR
ENSMUSG00000071655	Ubxn1	ENSMUST00000238036	ENSMUSP00000157971	TRANSLATION	protein_coding	-	CCDS29553.1	-	297	0	3.36	7.5	118.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071655	Ubxn1	ENSMUST00000166407	ENSMUSP00000133250	TRANSLATION	protein_coding	-	CCDS29553.1	1	297	0	3.36	7.5	118.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000071655	Ubxn1	ENSMUST00000096255	ENSMUSP00000093974	TRANSLATION	protein_coding	-	-	1	262	0	2.11	0	83.8	0	-4,-5	-	-	7.422	MINOR
ENSMUSG00000071655	Ubxn1	ENSMUST00000237220	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000236695	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000025774	ENSMUSP00000025774	TRANSLATION	protein_coding	-	CCDS29454.1	1	878	0	3.18	1.5	267.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024853	Sf3b2	ENSMUST00000235368	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000237781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000235772	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000235182	ENSMUSP00000157795	TRANSLATION	protein_coding	stop	-	-	308	0	2.1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024853	Sf3b2	ENSMUST00000237512	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024853	Sf3b2	ENSMUST00000236014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060303	Olfr1447	ENSMUST00000071484	ENSMUSP00000071419	TRANSLATION	protein_coding	-	CCDS29643.1	-	309	0	0	1.5	168.8	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000060303	Olfr1447	ENSMUST00000208343	ENSMUSP00000147020	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	55.3	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000060303	Olfr1447	ENSMUST00000216989	ENSMUSP00000149392	TRANSLATION	protein_coding	-	CCDS29643.1	5	309	0	0	1.5	168.8	6	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048832	Vps37c	ENSMUST00000237240	ENSMUSP00000158315	TRANSLATION	protein_coding	-	-	-	51	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000048832	Vps37c	ENSMUST00000235927	ENSMUSP00000158500	TRANSLATION	protein_coding	-	CCDS29585.1	-	352	0	0	1.5	125.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048832	Vps37c	ENSMUST00000235921	ENSMUSP00000158200	TRANSLATION	protein_coding	-	-	-	163	0	0	0	82.9	0	-4,-5	-	-	3.456	MINOR
ENSMUSG00000048832	Vps37c	ENSMUST00000087951	ENSMUSP00000085264	TRANSLATION	protein_coding	-	CCDS29585.1	1	352	0	0	1.5	125.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048832	Vps37c	ENSMUST00000237437	ENSMUSP00000158277	TRANSLATION	protein_coding	stop	-	-	104	0	0	0	68.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048612	Myof	ENSMUST00000172095	ENSMUSP00000129792	TRANSLATION	protein_coding	-	-	5	2048	17	12.035	1.5	665	1	-4,-5	-	-	18.214	MINOR
ENSMUSG00000048612	Myof	ENSMUST00000224518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048612	Myof	ENSMUST00000225287	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048612	Myof	ENSMUST00000225435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048612	Myof	ENSMUST00000226068	ENSMUSP00000153225	TRANSLATION	protein_coding	-	-	-	2061	17	12.035	5.1	665.5	1	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000048612	Myof	ENSMUST00000224580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048612	Myof	ENSMUST00000224900	ENSMUSP00000153590	TRANSLATION	protein_coding	start	-	-	186	0	0	0	93.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000048612	Myof	ENSMUST00000223650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048612	Myof	ENSMUST00000041475	ENSMUSP00000045036	TRANSLATION	protein_coding	-	CCDS37970.1	2	2048	17	12.035	5.1	665	1	-4,-5	-	-	19.97	PRINCIPAL:2
ENSMUSG00000048612	Myof	ENSMUST00000226084	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048612	Myof	ENSMUST00000224560	ENSMUSP00000153534	TRANSLATION	nonsense_mediated_decay	start	-	-	85	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000048612	Myof	ENSMUST00000225159	ENSMUSP00000153201	TRANSLATION	protein_coding	start	-	-	1307	8	5.58	0	390	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000237295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025025	Mxi1	ENSMUST00000235880	ENSMUSP00000157790	TRANSLATION	protein_coding	-	CCDS38023.1	-	192	0	2.33	2.7	41.7	0	-4,-1	-	-	12.48	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000003870	ENSMUSP00000003870	TRANSLATION	protein_coding	-	CCDS38022.1	1	295	0	2.33	3.9	41.7	0	-3,-6	-	-	12.822	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000237480	ENSMUSP00000157822	TRANSLATION	protein_coding	-	-	-	182	0	2	2.4	23.6	0	-4,-1	-	-	8.94	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000237837	ENSMUSP00000157666	TRANSLATION	protein_coding	-	-	-	84	0	0.2	0	0	0	-4,-6	-	-	0.516	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000111737	ENSMUSP00000107366	TRANSLATION	protein_coding	-	CCDS29901.1	1	228	0	2.33	11.6	41.7	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025025	Mxi1	ENSMUST00000236973	ENSMUSP00000157400	TRANSLATION	protein_coding	-	CCDS38023.1	-	192	0	2.33	2.7	41.7	0	-4,-1	-	-	12.48	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000025998	ENSMUSP00000025998	TRANSLATION	protein_coding	-	CCDS38023.1	1	192	0	2.33	2.7	41.7	0	-4,-1	-	-	12.48	MINOR
ENSMUSG00000025025	Mxi1	ENSMUST00000235201	ENSMUSP00000158401	TRANSLATION	protein_coding	-	CCDS38023.1	-	192	0	2.33	2.7	41.7	0	-4,-1	-	-	12.48	MINOR
ENSMUSG00000045678	Olfr1489	ENSMUST00000217182	ENSMUSP00000149711	TRANSLATION	protein_coding	-	CCDS29667.1	5	313	0	0	2.7	180.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045678	Olfr1489	ENSMUST00000053113	ENSMUSP00000062444	TRANSLATION	protein_coding	-	CCDS29667.1	-	313	0	0	2.7	180.3	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000094846	Olfr1487	ENSMUST00000217061	ENSMUSP00000149988	TRANSLATION	protein_coding	-	CCDS29666.1	5	315	0	1.12	5.2	185.4	10	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094846	Olfr1487	ENSMUST00000076856	ENSMUSP00000076128	TRANSLATION	protein_coding	-	CCDS29666.1	-	315	0	1.12	5.2	185.4	10	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000094846	Olfr1487	ENSMUST00000208347	ENSMUSP00000146516	TRANSLATION	protein_coding	stop	-	5	111	0	0	0	78	5	-2,-4	-	-	-1	MINOR
ENSMUSG00000094846	Olfr1487	ENSMUST00000209005	ENSMUSP00000146726	TRANSLATION	protein_coding	-	-	3	272	0	0.72	0	174.3	9	-2,-4	-	-	9.192	MINOR
ENSMUSG00000094846	Olfr1487	ENSMUST00000216688	ENSMUSP00000150752	TRANSLATION	protein_coding	-	-	5	272	0	0.72	0	174.3	9	-2,-4	-	-	9.192	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000175647	ENSMUSP00000135813	TRANSLATION	nonsense_mediated_decay	-	-	1	93	0	0	0	68	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000162110	ENSMUSP00000123818	TRANSLATION	protein_coding	-	-	5	401	0	0	1.5	179.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000159655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000160542	ENSMUSP00000124396	TRANSLATION	protein_coding	-	-	1	330	0	0	0	69.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000179171	ENSMUSP00000137486	TRANSLATION	protein_coding	-	-	5	76	0	0	0	0	0	-3,1	-	-	0	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000025872	ENSMUSP00000025872	TRANSLATION	protein_coding	-	CCDS37948.1	1	347	0	0	1.5	104.6	0	-4,-5	-	-	1.524	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000164777	ENSMUSP00000132800	TRANSLATION	protein_coding	-	-	1	333	0	0	0	69.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000064202	4430402I18Rik	ENSMUST00000161813	ENSMUSP00000123823	TRANSLATION	protein_coding	stop	-	5	39	0	0	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000055895	Oosp2	ENSMUST00000135994	ENSMUSP00000119198	TRANSLATION	protein_coding	-	-	3	70	0	0	0	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000055895	Oosp2	ENSMUST00000121793	ENSMUSP00000113931	TRANSLATION	protein_coding	-	CCDS29606.1	1	168	0	0	0.5	0	0	3,-2	-	-	0	PRINCIPAL:2
ENSMUSG00000035173	Ccdc186	ENSMUST00000135666	ENSMUSP00000122539	TRANSLATION	protein_coding	start	-	3	193	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035173	Ccdc186	ENSMUST00000076085	ENSMUSP00000075454	TRANSLATION	protein_coding	-	CCDS29921.1	1	917	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000035173	Ccdc186	ENSMUST00000140184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035173	Ccdc186	ENSMUST00000118592	ENSMUSP00000113457	TRANSLATION	protein_coding	-	CCDS29921.1	5	917	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000035173	Ccdc186	ENSMUST00000140705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035173	Ccdc186	ENSMUST00000156708	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042694	Stn1	ENSMUST00000183283	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042694	Stn1	ENSMUST00000049369	ENSMUSP00000040944	TRANSLATION	protein_coding	-	CCDS29892.1	1	378	0	8.116	0.5	276.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000042694	Stn1	ENSMUST00000183004	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042694	Stn1	ENSMUST00000182251	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042694	Stn1	ENSMUST00000182808	ENSMUSP00000138727	TRANSLATION	protein_coding	-	-	1	351	0	7.296	0.5	232.8	0	-4,-6	-	-	7.728	MINOR
ENSMUSG00000042694	Stn1	ENSMUST00000182873	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042694	Stn1	ENSMUST00000182714	ENSMUSP00000157804	TRANSLATION	protein_coding	-	-	2	87	0	1	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000042694	Stn1	ENSMUST00000182431	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042694	Stn1	ENSMUST00000182291	ENSMUSP00000138553	TRANSLATION	protein_coding	stop	-	3	99	0	2.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000042694	Stn1	ENSMUST00000182654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024908	Ppp6r3	ENSMUST00000225475	ENSMUSP00000153575	TRANSLATION	protein_coding	start	-	-	252	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024908	Ppp6r3	ENSMUST00000172362	ENSMUSP00000131084	TRANSLATION	protein_coding	-	CCDS50340.1	1	827	0	0	3.9	365.4	0	-4,-5	-	-	7.338	MINOR
ENSMUSG00000024908	Ppp6r3	ENSMUST00000223919	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024908	Ppp6r3	ENSMUST00000225705	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024908	Ppp6r3	ENSMUST00000226109	ENSMUSP00000153236	TRANSLATION	protein_coding	stop	-	-	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024908	Ppp6r3	ENSMUST00000113997	ENSMUSP00000109630	TRANSLATION	protein_coding	-	CCDS50341.1	5	873	0	0	7.5	365.4	0	-4,-5	-	-	9	ALTERNATIVE:1
ENSMUSG00000024908	Ppp6r3	ENSMUST00000225339	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024908	Ppp6r3	ENSMUST00000225446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024908	Ppp6r3	ENSMUST00000025846	ENSMUSP00000025846	TRANSLATION	protein_coding	-	CCDS29397.1	1	844	0	0	6.3	365.4	0	-4,-5	-	-	8.445	PRINCIPAL:3
ENSMUSG00000024908	Ppp6r3	ENSMUST00000225624	ENSMUSP00000152970	TRANSLATION	protein_coding	start/stop	-	-	228	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025082	Vwa2	ENSMUST00000026068	ENSMUSP00000026068	TRANSLATION	protein_coding	-	CCDS29923.1	1	791	8	5.94	0.5	335.2	0	2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024841	Eif1ad	ENSMUST00000235664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024841	Eif1ad	ENSMUST00000025759	ENSMUSP00000025759	TRANSLATION	protein_coding	-	CCDS29459.1	1	170	0	3.1	0.5	66.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024841	Eif1ad	ENSMUST00000236059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067545	Olfr1419	ENSMUST00000087857	ENSMUSP00000085163	TRANSLATION	protein_coding	-	CCDS29616.1	-	343	0	0.36	0.5	185.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067545	Olfr1419	ENSMUST00000217617	ENSMUSP00000148848	TRANSLATION	protein_coding	-	CCDS29616.1	5	343	0	0.36	0.5	185.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067545	Olfr1419	ENSMUST00000213954	ENSMUSP00000150966	TRANSLATION	protein_coding	-	CCDS29616.1	5	343	0	0.36	0.5	185.7	7	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024965	Fermt3	ENSMUST00000238171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024965	Fermt3	ENSMUST00000040772	ENSMUSP00000037858	TRANSLATION	protein_coding	-	CCDS29518.1	1	665	0	9.26	7.5	193.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024965	Fermt3	ENSMUST00000237960	ENSMUSP00000158556	TRANSLATION	nonsense_mediated_decay	-	-	-	266	0	3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024965	Fermt3	ENSMUST00000236188	ENSMUSP00000157637	TRANSLATION	protein_coding	stop	-	-	93	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024965	Fermt3	ENSMUST00000237888	ENSMUSP00000157792	TRANSLATION	nonsense_mediated_decay	-	-	-	530	0	6.9	0	100.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063796	Slc22a8	ENSMUST00000237904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063796	Slc22a8	ENSMUST00000170817	ENSMUSP00000131045	TRANSLATION	protein_coding	-	CCDS29537.1	5	537	0	3.82	1.5	108.1	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000063796	Slc22a8	ENSMUST00000010251	ENSMUSP00000010251	TRANSLATION	protein_coding	-	CCDS29537.1	1	537	0	3.82	1.5	108.1	10	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024873	Cnih2	ENSMUST00000025805	ENSMUSP00000025805	TRANSLATION	protein_coding	-	CCDS29451.1	1	160	0	0	17.5	117.1	2	-1,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024873	Cnih2	ENSMUST00000235638	ENSMUSP00000157729	TRANSLATION	nonsense_mediated_decay	-	-	-	62	0	0	0	41.1	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000045932	Ifit2	ENSMUST00000149829	ENSMUSP00000120411	TRANSLATION	protein_coding	stop	-	3	43	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000045932	Ifit2	ENSMUST00000102826	ENSMUSP00000099890	TRANSLATION	protein_coding	-	CCDS29761.1	1	470	0	2	0.5	28.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024972	Lgals12	ENSMUST00000099729	ENSMUSP00000097318	TRANSLATION	protein_coding	-	CCDS29529.1	1	314	8	5.166	5.1	146.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024972	Lgals12	ENSMUST00000159983	ENSMUSP00000124610	TRANSLATION	protein_coding	-	CCDS29529.1	1	314	8	5.166	5.1	146.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024972	Lgals12	ENSMUST00000079902	ENSMUSP00000078824	TRANSLATION	protein_coding	-	-	1	301	8	5.126	1.2	146.7	0	-4,-5	-	-	18.02	MINOR
ENSMUSG00000096289	Olfr1484	ENSMUST00000216369	ENSMUSP00000150640	TRANSLATION	protein_coding	-	-	5	272	0	0	0	173.8	7	-2,-4	-	-	5.34	MINOR
ENSMUSG00000096289	Olfr1484	ENSMUST00000074180	ENSMUSP00000073811	TRANSLATION	protein_coding	-	CCDS29665.1	-	315	0	0	7.6	184.8	8	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000096289	Olfr1484	ENSMUST00000208104	ENSMUSP00000146646	TRANSLATION	protein_coding	-	-	2	272	0	0	0	173.8	7	-2,-4	-	-	5.34	MINOR
ENSMUSG00000096289	Olfr1484	ENSMUST00000217451	ENSMUSP00000150779	TRANSLATION	protein_coding	-	CCDS29665.1	5	315	0	0	7.6	184.8	8	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000096289	Olfr1484	ENSMUST00000216014	ENSMUSP00000150019	TRANSLATION	protein_coding	-	CCDS29665.1	2	315	0	0	7.6	184.8	8	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000096289	Olfr1484	ENSMUST00000215567	ENSMUSP00000149111	TRANSLATION	protein_coding	-	CCDS29665.1	5	315	0	0	7.6	184.8	8	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000034459	Ifit1	ENSMUST00000102824	ENSMUSP00000099888	TRANSLATION	protein_coding	-	CCDS29766.1	1	463	0	1	0.5	34.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046139	Patl1	ENSMUST00000238190	ENSMUSP00000158282	TRANSLATION	nonsense_mediated_decay	-	-	-	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046139	Patl1	ENSMUST00000061618	ENSMUSP00000060398	TRANSLATION	protein_coding	-	CCDS37924.1	1	770	0	6.08	7.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000033760	Rbm4b	ENSMUST00000036744	ENSMUSP00000038256	TRANSLATION	protein_coding	-	CCDS29435.1	1	357	0	1.2	2.7	151.1	0	-4,-5	-	-	11.412	PRINCIPAL:1
ENSMUSG00000033760	Rbm4b	ENSMUST00000182065	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033760	Rbm4b	ENSMUST00000183008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033760	Rbm4b	ENSMUST00000236797	ENSMUSP00000157577	TRANSLATION	nonsense_mediated_decay	-	-	-	154	0	1.33	0.5	118.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033760	Rbm4b	ENSMUST00000236160	ENSMUSP00000158126	TRANSLATION	nonsense_mediated_decay	-	-	-	142	0	1	1	116.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033760	Rbm4b	ENSMUST00000235278	ENSMUSP00000157500	TRANSLATION	nonsense_mediated_decay	-	-	-	357	0	1.2	2.7	151.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033760	Rbm4b	ENSMUST00000183332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033760	Rbm4b	ENSMUST00000182200	ENSMUSP00000138146	TRANSLATION	nonsense_mediated_decay	-	-	1	152	0	1.05	2.4	118.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033760	Rbm4b	ENSMUST00000237921	ENSMUSP00000157783	TRANSLATION	protein_coding	stop	-	-	285	0	1.2	0	151.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033760	Rbm4b	ENSMUST00000182821	ENSMUSP00000157674	TRANSLATION	protein_coding	-	CCDS29435.1	1	357	0	1.2	2.7	151.1	0	-4,-5	-	-	11.412	PRINCIPAL:1
ENSMUSG00000056629	Fkbp2	ENSMUST00000070878	ENSMUSP00000066839	TRANSLATION	protein_coding	-	CCDS29515.1	1	140	3	3.63	7.5	119.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000056629	Fkbp2	ENSMUST00000177752	ENSMUSP00000136438	TRANSLATION	protein_coding	-	CCDS29515.1	1	140	3	3.63	7.5	119.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000056629	Fkbp2	ENSMUST00000238181	ENSMUSP00000158226	TRANSLATION	protein_coding	-	-	-	266	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000056629	Fkbp2	ENSMUST00000237119	ENSMUSP00000157679	TRANSLATION	nonsense_mediated_decay	-	-	-	229	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000025203	Scd2	ENSMUST00000026221	ENSMUSP00000026221	TRANSLATION	protein_coding	-	CCDS29848.1	1	358	0	5	1.5	56.1	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025203	Scd2	ENSMUST00000237039	ENSMUSP00000158244	TRANSLATION	nonsense_mediated_decay	-	-	-	215	0	3	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000047810	Ccdc88b	ENSMUST00000113440	ENSMUSP00000109067	TRANSLATION	protein_coding	-	CCDS37900.1	1	1481	0	0	0.5	49.2	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047810	Ccdc88b	ENSMUST00000237252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047810	Ccdc88b	ENSMUST00000236028	ENSMUSP00000158268	TRANSLATION	protein_coding	start	-	-	1133	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047810	Ccdc88b	ENSMUST00000238099	ENSMUSP00000157482	TRANSLATION	protein_coding	start/stop	-	-	204	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025154	Arhgap19	ENSMUST00000177495	ENSMUSP00000135293	TRANSLATION	protein_coding	-	-	1	479	0	2.5	0	124.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025154	Arhgap19	ENSMUST00000163265	ENSMUSP00000129586	TRANSLATION	protein_coding	-	CCDS50435.1	5	479	0	2.5	0.5	124.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000025154	Arhgap19	ENSMUST00000026150	ENSMUSP00000026150	TRANSLATION	protein_coding	-	CCDS37989.1	1	494	0	2.5	6.3	124.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000043969	Emx2	ENSMUST00000174573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043969	Emx2	ENSMUST00000062216	ENSMUSP00000053361	TRANSLATION	protein_coding	-	CCDS29937.1	1	253	0	2	7.5	75.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043969	Emx2	ENSMUST00000174353	ENSMUSP00000140271	TRANSLATION	protein_coding	start	-	5	69	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025064	Col17a1	ENSMUST00000235883	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025064	Col17a1	ENSMUST00000145254	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025064	Col17a1	ENSMUST00000026045	ENSMUSP00000026045	TRANSLATION	protein_coding	-	CCDS70959.1	1	1470	0	10.969	0.5	131.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025064	Col17a1	ENSMUST00000086923	ENSMUSP00000084141	TRANSLATION	protein_coding	-	CCDS38018.1	1	1433	0	10.969	0.5	131.3	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000025064	Col17a1	ENSMUST00000151102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024653	Scgb1a1	ENSMUST00000025554	ENSMUSP00000025554	TRANSLATION	protein_coding	-	CCDS37911.1	1	96	0	2	1.5	72.6	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000039652	Cpeb3	ENSMUST00000132580	ENSMUSP00000118723	TRANSLATION	protein_coding	-	CCDS29775.1	1	716	8	5.56	1.7	191.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000039652	Cpeb3	ENSMUST00000154376	ENSMUSP00000116172	TRANSLATION	protein_coding	-	CCDS29775.1	1	716	8	5.56	1.7	191.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000039652	Cpeb3	ENSMUST00000079754	ENSMUSP00000078690	TRANSLATION	protein_coding	-	CCDS29775.1	1	716	8	5.56	1.7	191.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000039652	Cpeb3	ENSMUST00000126781	ENSMUSP00000122442	TRANSLATION	protein_coding	-	-	1	561	0	4	0	118.7	0	-4,-5	-	-	4.512	MINOR
ENSMUSG00000039652	Cpeb3	ENSMUST00000123727	ENSMUSP00000121987	TRANSLATION	protein_coding	-	CCDS70946.1	1	685	8	5.56	0.5	191.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039652	Cpeb3	ENSMUST00000136286	ENSMUSP00000116309	TRANSLATION	protein_coding	-	-	5	699	8	5.56	0	191.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039652	Cpeb3	ENSMUST00000142973	ENSMUSP00000117242	TRANSLATION	protein_coding	stop	-	2	127	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039652	Cpeb3	ENSMUST00000126188	ENSMUSP00000120416	TRANSLATION	protein_coding	-	CCDS70947.1	1	693	8	5.56	0.5	191.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000039652	Cpeb3	ENSMUST00000124158	ENSMUSP00000115656	TRANSLATION	protein_coding	start	-	5	415	8	5.56	0	191.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039652	Cpeb3	ENSMUST00000133988	ENSMUSP00000116749	TRANSLATION	protein_coding	stop	-	3	179	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039652	Cpeb3	ENSMUST00000128642	ENSMUSP00000115038	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039652	Cpeb3	ENSMUST00000131917	ENSMUSP00000123080	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024639	Gnaq	ENSMUST00000025541	ENSMUSP00000025541	TRANSLATION	protein_coding	-	CCDS29684.1	1	359	24	7	18.3	398.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024639	Gnaq	ENSMUST00000167656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024639	Gnaq	ENSMUST00000170229	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024659	Anxa1	ENSMUST00000164587	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024659	Anxa1	ENSMUST00000163902	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024659	Anxa1	ENSMUST00000025561	ENSMUSP00000025561	TRANSLATION	protein_coding	-	CCDS29692.1	1	346	18	10	8.8	308.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024659	Anxa1	ENSMUST00000167668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024659	Anxa1	ENSMUST00000235280	ENSMUSP00000158305	TRANSLATION	protein_coding	-	CCDS29692.1	-	346	18	10	8.8	308.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024659	Anxa1	ENSMUST00000168020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024659	Anxa1	ENSMUST00000171423	ENSMUSP00000158429	TRANSLATION	nonsense_mediated_decay	-	-	5	302	14	8.85	0	226.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024659	Anxa1	ENSMUST00000165518	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025081	Tdrd1	ENSMUST00000111604	ENSMUSP00000107231	TRANSLATION	protein_coding	-	CCDS29922.1	1	1172	28	10.56	0.5	459	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025081	Tdrd1	ENSMUST00000111606	ENSMUSP00000107233	TRANSLATION	protein_coding	-	CCDS29922.1	1	1172	28	10.56	0.5	459	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025081	Tdrd1	ENSMUST00000121249	ENSMUSP00000112786	TRANSLATION	protein_coding	-	CCDS29922.1	1	1172	28	10.56	0.5	459	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025081	Tdrd1	ENSMUST00000078723	ENSMUSP00000077785	TRANSLATION	protein_coding	-	CCDS29922.1	1	1172	28	10.56	0.5	459	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000032702	Kank1	ENSMUST00000137260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032702	Kank1	ENSMUST00000146647	ENSMUSP00000116660	TRANSLATION	protein_coding	stop	-	1	1147	0	0.6	0	73.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000032702	Kank1	ENSMUST00000155788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032702	Kank1	ENSMUST00000049400	ENSMUSP00000042177	TRANSLATION	protein_coding	-	CCDS37944.1	5	1360	0	4.75	1.5	169.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056999	Ide	ENSMUST00000150707	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056999	Ide	ENSMUST00000131070	ENSMUSP00000121358	TRANSLATION	protein_coding	start	-	1	987	13	22.75	0	642	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000056999	Ide	ENSMUST00000134740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056999	Ide	ENSMUST00000154308	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056999	Ide	ENSMUST00000154339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044345	Marveld1	ENSMUST00000184186	ENSMUSP00000139254	TRANSLATION	protein_coding	start	-	-	154	0	0	0	63.4	5	-3,-6	-	-	-1	MINOR
ENSMUSG00000044345	Marveld1	ENSMUST00000061111	ENSMUSP00000053733	TRANSLATION	protein_coding	-	CCDS50439.1	1	173	0	0	1.7	63.4	5	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024910	Ctsw	ENSMUST00000237556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024910	Ctsw	ENSMUST00000025844	ENSMUSP00000025844	TRANSLATION	protein_coding	-	CCDS29465.1	1	371	4	6.35	1.5	256.8	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000024910	Ctsw	ENSMUST00000236256	ENSMUSP00000157959	TRANSLATION	protein_coding	-	-	-	342	3	5.75	0	233.3	0	3,-2	-	-	12.39	MINOR
ENSMUSG00000024910	Ctsw	ENSMUST00000235786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024910	Ctsw	ENSMUST00000235502	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024910	Ctsw	ENSMUST00000236091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024782	Ak3	ENSMUST00000125587	ENSMUSP00000121867	TRANSLATION	protein_coding	start	-	2	65	0	1.75	0	62.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024782	Ak3	ENSMUST00000025696	ENSMUSP00000025696	TRANSLATION	protein_coding	-	CCDS29730.1	1	227	19	5.75	8.8	235.8	0	-3,0	-	-	21	PRINCIPAL:1
ENSMUSG00000074852	Hpse2	ENSMUST00000238153	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074852	Hpse2	ENSMUST00000236823	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074852	Hpse2	ENSMUST00000099428	ENSMUSP00000097026	TRANSLATION	protein_coding	-	CCDS37993.1	1	592	1	8.6	7.5	0	0	1,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000095993	Gm21060	ENSMUST00000179346	ENSMUSP00000136027	TRANSLATION	protein_coding	start/stop	-	-	56	8	1	0	44	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000038812	Trmt112	ENSMUST00000088257	ENSMUSP00000085591	TRANSLATION	protein_coding	-	CCDS29508.1	1	125	0	2.805	7.5	63.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000038812	Trmt112	ENSMUST00000174786	ENSMUSP00000134000	TRANSLATION	protein_coding	-	-	1	108	0	2.005	0	31.9	0	-4,0	-	-	7.314	MINOR
ENSMUSG00000038812	Trmt112	ENSMUST00000116551	ENSMUSP00000112250	TRANSLATION	protein_coding	-	CCDS29508.1	1	125	0	2.805	7.5	63.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000038812	Trmt112	ENSMUST00000172869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034321	Exosc1	ENSMUST00000237177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034321	Exosc1	ENSMUST00000112123	ENSMUSP00000107751	TRANSLATION	protein_coding	-	CCDS50436.1	1	154	0	4.33	0.5	35.5	0	-4,-5	-	-	9.342	MINOR
ENSMUSG00000034321	Exosc1	ENSMUST00000238034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034321	Exosc1	ENSMUST00000075280	ENSMUSP00000074756	TRANSLATION	protein_coding	-	CCDS29816.1	1	195	0	5.66	7.4	35.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000064105	Cnnm2	ENSMUST00000099373	ENSMUSP00000096972	TRANSLATION	protein_coding	-	CCDS50459.1	1	875	14	1.6	7.5	145.2	3	-3,-4	-	-	21	PRINCIPAL:4
ENSMUSG00000064105	Cnnm2	ENSMUST00000235671	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000064105	Cnnm2	ENSMUST00000235378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064105	Cnnm2	ENSMUST00000077666	ENSMUSP00000076850	TRANSLATION	protein_coding	-	CCDS50460.1	1	853	14	1.6	7.5	145.2	3	-3,-4	-	-	21	ALTERNATIVE:1
ENSMUSG00000024991	Eif3a	ENSMUST00000025955	ENSMUSP00000025955	TRANSLATION	protein_coding	-	CCDS38035.1	1	1344	0	20.93	0.5	81.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024991	Eif3a	ENSMUST00000236622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024991	Eif3a	ENSMUST00000238125	ENSMUSP00000157622	TRANSLATION	protein_coding	start	-	-	194	0	2.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024991	Eif3a	ENSMUST00000235706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024991	Eif3a	ENSMUST00000237319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101031	Ms4a12	ENSMUST00000186228	ENSMUSP00000140981	TRANSLATION	protein_coding	-	-	5	263	0	0	0.5	55.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024675	Ms4a4c	ENSMUST00000153546	ENSMUSP00000118694	TRANSLATION	protein_coding	stop	-	3	75	0	0	0	0	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000024675	Ms4a4c	ENSMUST00000119366	ENSMUSP00000113130	TRANSLATION	protein_coding	start	-	1	184	0	0	0	70.6	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000024675	Ms4a4c	ENSMUST00000072729	ENSMUSP00000072512	TRANSLATION	protein_coding	-	CCDS29599.1	1	226	0	0	0.5	66.1	6	-4,-6	-	-	5.616	PRINCIPAL:1
ENSMUSG00000046008	Pnlip	ENSMUST00000057270	ENSMUSP00000056377	TRANSLATION	protein_coding	-	CCDS29930.1	1	465	15	10.75	1.5	598.6	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046008	Pnlip	ENSMUST00000237426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046008	Pnlip	ENSMUST00000237451	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046008	Pnlip	ENSMUST00000238108	ENSMUSP00000157401	TRANSLATION	protein_coding	stop	-	-	190	5	4	0	249.7	0	4,-1	-	-	-1	MINOR
ENSMUSG00000024787	Snx15	ENSMUST00000124964	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024787	Snx15	ENSMUST00000138931	ENSMUSP00000114189	TRANSLATION	protein_coding	stop	-	3	230	0	1.08	0	54.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024787	Snx15	ENSMUST00000025702	ENSMUSP00000025702	TRANSLATION	protein_coding	-	CCDS29495.1	1	337	0	2.28	2.7	118	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024787	Snx15	ENSMUST00000124171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024787	Snx15	ENSMUST00000154601	ENSMUSP00000122740	TRANSLATION	protein_coding	-	-	5	251	0	1.68	0	55.9	0	-4,-5	-	-	6.696	MINOR
ENSMUSG00000024787	Snx15	ENSMUST00000150718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024787	Snx15	ENSMUST00000235824	ENSMUSP00000158383	TRANSLATION	nonsense_mediated_decay	start	-	-	193	0	0.6	0	48.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024787	Snx15	ENSMUST00000129076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024889	Rce1	ENSMUST00000224675	ENSMUSP00000153303	TRANSLATION	protein_coding	-	-	-	225	0	0	3.9	59.2	15	1,-3	-	-	7.116	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000225264	ENSMUSP00000153024	TRANSLATION	protein_coding	start/stop	-	-	172	0	0	0	36.2	14	-2,-5	-	-	-1	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000237059	ENSMUSP00000158146	TRANSLATION	protein_coding	-	-	-	204	0	0	0	36.9	13	1,-3	-	-	3.738	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000025823	ENSMUSP00000025823	TRANSLATION	protein_coding	-	CCDS29432.1	1	329	0	0	8.8	59.2	19	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000024889	Rce1	ENSMUST00000236880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024889	Rce1	ENSMUST00000225285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024889	Rce1	ENSMUST00000237022	ENSMUSP00000157811	TRANSLATION	protein_coding	-	-	-	271	4	0	0.5	31.8	9	1,-3	-	-	7.222	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000225375	ENSMUSP00000153100	TRANSLATION	protein_coding	start/stop	-	-	230	0	0	0	31.2	9	-2,1	-	-	-1	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000225509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024889	Rce1	ENSMUST00000224707	ENSMUSP00000153695	TRANSLATION	protein_coding	-	-	-	225	0	0	3.9	59.2	15	1,-3	-	-	7.116	MINOR
ENSMUSG00000024889	Rce1	ENSMUST00000225476	ENSMUSP00000153448	TRANSLATION	nonsense_mediated_decay	-	-	-	221	0	0	0	0	10	-4,-2	-	-	-1	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000236058	ENSMUSP00000157689	TRANSLATION	protein_coding	-	-	-	623	8	16.66	12.8	405.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182500	ENSMUSP00000138097	TRANSLATION	nonsense_mediated_decay	-	-	1	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182534	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025027	Xpnpep1	ENSMUST00000183108	ENSMUSP00000138250	TRANSLATION	protein_coding	-	CCDS29899.2	1	666	8	16.66	6.5	405.9	0	-4,-1	-	-	19.864	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000183188	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025027	Xpnpep1	ENSMUST00000235453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025027	Xpnpep1	ENSMUST00000238001	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182939	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182097	ENSMUSP00000138473	TRANSLATION	protein_coding	stop	-	3	119	0	3.58	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000183274	ENSMUSP00000138233	TRANSLATION	protein_coding	-	-	1	635	8	15.7524	0	355.5	0	-4,-1	-	-	13.158	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025027	Xpnpep1	ENSMUST00000237294	ENSMUSP00000158390	TRANSLATION	protein_coding	-	-	-	623	8	16.66	12.8	405.9	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000025027	Xpnpep1	ENSMUST00000236456	ENSMUSP00000157484	TRANSLATION	nonsense_mediated_decay	-	-	-	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000236008	ENSMUSP00000158501	TRANSLATION	protein_coding	-	-	-	587	8	15.66	0	355.5	0	-4,-7	-	-	12.978	MINOR
ENSMUSG00000025027	Xpnpep1	ENSMUST00000182877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024792	Zfpl1	ENSMUST00000160448	ENSMUSP00000124799	TRANSLATION	nonsense_mediated_decay	-	-	3	80	2	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024792	Zfpl1	ENSMUST00000160977	ENSMUSP00000125176	TRANSLATION	protein_coding	stop	-	5	264	8	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024792	Zfpl1	ENSMUST00000160444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024792	Zfpl1	ENSMUST00000160712	ENSMUSP00000125085	TRANSLATION	protein_coding	stop	-	2	182	8	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024792	Zfpl1	ENSMUST00000025707	ENSMUSP00000025707	TRANSLATION	protein_coding	-	CCDS29492.1	1	310	8	0	2.7	0	1	-4,-7	-	-	6	PRINCIPAL:2
ENSMUSG00000024792	Zfpl1	ENSMUST00000161548	ENSMUSP00000125459	TRANSLATION	protein_coding	stop	-	5	242	8	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024792	Zfpl1	ENSMUST00000160131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024792	Zfpl1	ENSMUST00000237738	ENSMUSP00000157864	TRANSLATION	protein_coding	-	-	-	306	8	0	2.7	0	1	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000024792	Zfpl1	ENSMUST00000159859	ENSMUSP00000124857	TRANSLATION	protein_coding	stop	-	3	129	8	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024792	Zfpl1	ENSMUST00000160357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071653	1810009A15Rik	ENSMUST00000185488	ENSMUSP00000140221	TRANSLATION	nonsense_mediated_decay	-	-	3	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000071653	1810009A15Rik	ENSMUST00000187037	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071653	1810009A15Rik	ENSMUST00000096251	ENSMUSP00000093970	TRANSLATION	protein_coding	-	CCDS29555.1	1	123	0	0	6.4	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000071653	1810009A15Rik	ENSMUST00000186647	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071653	1810009A15Rik	ENSMUST00000190843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046913	Olfr1451	ENSMUST00000207997	ENSMUSP00000146874	TRANSLATION	protein_coding	-	CCDS29647.1	3	310	0	0.2	4.2	173.5	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000046913	Olfr1451	ENSMUST00000063144	ENSMUSP00000049885	TRANSLATION	protein_coding	-	CCDS29647.1	-	310	0	0.2	4.2	173.5	6	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000040929	Rfx3	ENSMUST00000174420	ENSMUSP00000134700	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	34.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040929	Rfx3	ENSMUST00000173863	ENSMUSP00000133367	TRANSLATION	nonsense_mediated_decay	-	-	5	458	0	1.6	1	184.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040929	Rfx3	ENSMUST00000172498	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040929	Rfx3	ENSMUST00000165566	ENSMUSP00000126313	TRANSLATION	protein_coding	-	CCDS29725.1	5	749	0	2.1	17	234.5	0	-4,-5	-	-	15.898	PRINCIPAL:1
ENSMUSG00000040929	Rfx3	ENSMUST00000174850	ENSMUSP00000133461	TRANSLATION	protein_coding	-	CCDS29725.1	1	749	0	2.1	17	234.5	0	-4,-5	-	-	15.898	PRINCIPAL:1
ENSMUSG00000040929	Rfx3	ENSMUST00000173161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040929	Rfx3	ENSMUST00000046898	ENSMUSP00000038760	TRANSLATION	protein_coding	-	-	1	724	0	2.1	5.7	236.2	0	-4,-5	-	-	13.176	MINOR
ENSMUSG00000040929	Rfx3	ENSMUST00000172907	ENSMUSP00000134141	TRANSLATION	protein_coding	-	CCDS29725.1	1	749	0	2.1	17	234.5	0	-4,-5	-	-	15.898	PRINCIPAL:1
ENSMUSG00000033478	Fam160b1	ENSMUST00000036407	ENSMUSP00000048903	TRANSLATION	protein_coding	-	CCDS29925.1	1	764	0	0	5.1	472.2	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000033478	Fam160b1	ENSMUST00000237170	ENSMUSP00000157398	TRANSLATION	nonsense_mediated_decay	-	-	-	180	0	0	0	152.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000180304	ENSMUSP00000135998	TRANSLATION	nonsense_mediated_decay	start	-	5	45	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000177605	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000179553	ENSMUSP00000136384	TRANSLATION	nonsense_mediated_decay	-	-	2	35	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000178781	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000038830	ENSMUSP00000048395	TRANSLATION	protein_coding	-	CCDS29699.1	1	155	20	0	1.5	110.5	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000178523	ENSMUSP00000137564	TRANSLATION	protein_coding	-	-	3	35	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000178012	ENSMUSP00000136940	TRANSLATION	nonsense_mediated_decay	start	-	3	34	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000177577	ENSMUSP00000136688	TRANSLATION	protein_coding	-	-	3	44	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000035171	1110059E24Rik	ENSMUST00000179768	ENSMUSP00000136927	TRANSLATION	protein_coding	-	-	2	108	20	0	0	110.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024907	Gal	ENSMUST00000025842	ENSMUSP00000025842	TRANSLATION	protein_coding	-	-	1	141	4	0	0	67.7	0	2,-2	-	-	7.678	ALTERNATIVE:2
ENSMUSG00000024907	Gal	ENSMUST00000237521	ENSMUSP00000157515	TRANSLATION	protein_coding	-	CCDS29396.1	-	124	0	0	3.9	106.4	0	2,-2	-	-	7	PRINCIPAL:2
ENSMUSG00000024831	Ighmbp2	ENSMUST00000143079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024831	Ighmbp2	ENSMUST00000025751	ENSMUSP00000025751	TRANSLATION	protein_coding	-	CCDS29393.1	1	993	12	12.85	0.5	439.9	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024831	Ighmbp2	ENSMUST00000154537	ENSMUSP00000122827	TRANSLATION	nonsense_mediated_decay	-	-	1	253	0	2.75	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024831	Ighmbp2	ENSMUST00000119292	ENSMUSP00000113438	TRANSLATION	protein_coding	-	-	5	885	12	12.85	0	412.1	0	-4,-7	-	-	16.332	MINOR
ENSMUSG00000010097	Nxf1	ENSMUST00000010241	ENSMUSP00000010241	TRANSLATION	protein_coding	-	CCDS29543.1	1	618	0	16.76	7.5	318.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000010097	Nxf1	ENSMUST00000183780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010097	Nxf1	ENSMUST00000184387	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010097	Nxf1	ENSMUST00000184826	ENSMUSP00000139229	TRANSLATION	protein_coding	start	-	5	89	0	2.58	0	92	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010097	Nxf1	ENSMUST00000184808	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010097	Nxf1	ENSMUST00000184756	ENSMUSP00000139050	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000010097	Nxf1	ENSMUST00000183898	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010097	Nxf1	ENSMUST00000183939	ENSMUSP00000139351	TRANSLATION	protein_coding	-	-	5	282	0	5.75	0	80.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000010097	Nxf1	ENSMUST00000185056	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010097	Nxf1	ENSMUST00000184970	ENSMUSP00000139124	TRANSLATION	protein_coding	-	CCDS70930.1	1	418	0	8.18	0.5	131.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024738	Pga5	ENSMUST00000225135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024738	Pga5	ENSMUST00000225016	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024738	Pga5	ENSMUST00000025647	ENSMUSP00000025647	TRANSLATION	protein_coding	-	CCDS29584.1	1	387	5	8	1.5	403.1	0	1,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000035783	Acta2	ENSMUST00000238147	ENSMUSP00000157800	TRANSLATION	protein_coding	stop	-	-	214	13	5.08	0	260.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035783	Acta2	ENSMUST00000039631	ENSMUSP00000048218	TRANSLATION	protein_coding	-	CCDS29757.1	1	377	24	8.08	19.5	497.3	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000052595	A1cf	ENSMUST00000224400	ENSMUSP00000153397	TRANSLATION	protein_coding	-	-	-	300	0	4.6	0	108.2	0	-4,-7	-	-	4.14	MINOR
ENSMUSG00000052595	A1cf	ENSMUST00000224564	ENSMUSP00000153465	TRANSLATION	protein_coding	-	-	-	384	0	5.53	0	135.1	0	-4,-5	-	-	6.648	MINOR
ENSMUSG00000052595	A1cf	ENSMUST00000225165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052595	A1cf	ENSMUST00000224304	ENSMUSP00000153542	TRANSLATION	protein_coding	-	-	-	587	0	5.53	7.6	224.3	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000052595	A1cf	ENSMUST00000075838	ENSMUSP00000075235	TRANSLATION	protein_coding	-	CCDS37959.1	1	595	0	5.53	7.6	224.3	0	-4,-5	-	-	15	PRINCIPAL:2
ENSMUSG00000025220	Oga	ENSMUST00000236960	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025220	Oga	ENSMUST00000235448	ENSMUSP00000157944	TRANSLATION	protein_coding	stop	-	-	84	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025220	Oga	ENSMUST00000026243	ENSMUSP00000026243	TRANSLATION	protein_coding	-	CCDS29866.1	1	916	0	15.33	7.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025220	Oga	ENSMUST00000235936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025220	Oga	ENSMUST00000235865	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025220	Oga	ENSMUST00000235508	ENSMUSP00000157443	TRANSLATION	protein_coding	-	-	-	182	0	3.75	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000024970	Spindoc	ENSMUST00000025924	ENSMUSP00000025924	TRANSLATION	protein_coding	-	CCDS29523.1	1	381	4	0	3.9	0	0	-4,-5	-	-	5	PRINCIPAL:1
ENSMUSG00000024970	Spindoc	ENSMUST00000235678	ENSMUSP00000158438	TRANSLATION	protein_coding	start	-	-	72	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024970	Spindoc	ENSMUST00000236817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024970	Spindoc	ENSMUST00000237653	ENSMUSP00000158436	TRANSLATION	protein_coding	start	-	-	270	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035179	Ppp1r32	ENSMUST00000236733	ENSMUSP00000157876	TRANSLATION	protein_coding	stop	-	-	54	0	0	0	101.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035179	Ppp1r32	ENSMUST00000235392	ENSMUSP00000157403	TRANSLATION	protein_coding	-	-	-	253	0	0	0.5	338.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035179	Ppp1r32	ENSMUST00000038842	ENSMUSP00000035684	TRANSLATION	protein_coding	-	CCDS29577.1	1	427	0	0	1.5	652.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000035179	Ppp1r32	ENSMUST00000237522	ENSMUSP00000158578	TRANSLATION	protein_coding	-	CCDS29577.1	-	427	0	0	1.5	652.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024897	Apba1	ENSMUST00000237688	ENSMUSP00000157770	TRANSLATION	protein_coding	-	-	-	452	0	7.83	0	278	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024897	Apba1	ENSMUST00000025830	ENSMUSP00000025830	TRANSLATION	protein_coding	-	CCDS50407.1	1	842	0	7.83	1.5	278	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025185	Loxl4	ENSMUST00000164786	ENSMUSP00000125803	TRANSLATION	protein_coding	-	CCDS50441.1	1	758	0	4.86	1.5	663.8	0	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025185	Loxl4	ENSMUST00000166128	ENSMUSP00000126552	TRANSLATION	protein_coding	stop	-	3	147	0	1.8	0	105.1	0	0,-3	-	-	-1	MINOR
ENSMUSG00000025185	Loxl4	ENSMUST00000164014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025185	Loxl4	ENSMUST00000171432	ENSMUSP00000126686	TRANSLATION	protein_coding	-	CCDS29830.1	1	757	0	4.86	1.5	663.8	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000025185	Loxl4	ENSMUST00000026190	ENSMUSP00000026190	TRANSLATION	protein_coding	-	CCDS29830.1	1	757	0	4.86	1.5	663.8	0	3,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000069833	Ahnak	ENSMUST00000092956	ENSMUSP00000090633	TRANSLATION	protein_coding	-	CCDS29564.1	1	5656	0	1.08	0.5	30.2	0	-4,-5	-	-	12	MINOR
ENSMUSG00000069833	Ahnak	ENSMUST00000237912	ENSMUSP00000157404	TRANSLATION	nonsense_mediated_decay	-	-	-	176	0	1.08	0	30.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069833	Ahnak	ENSMUST00000092955	ENSMUSP00000090632	TRANSLATION	protein_coding	-	CCDS50384.1	2	150	0	1.08	5.1	30.2	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000069833	Ahnak	ENSMUST00000236390	ENSMUSP00000158470	TRANSLATION	protein_coding	stop	-	-	311	0	1.08	0	30.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000069833	Ahnak	ENSMUST00000237033	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024668	Sdhaf2	ENSMUST00000235446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024668	Sdhaf2	ENSMUST00000235486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024668	Sdhaf2	ENSMUST00000235243	ENSMUSP00000157529	TRANSLATION	nonsense_mediated_decay	start	-	-	44	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000024668	Sdhaf2	ENSMUST00000237827	ENSMUSP00000157391	TRANSLATION	protein_coding	-	-	-	135	0	1.655	0	77.3	0	-3,1	-	-	9.75	MINOR
ENSMUSG00000024668	Sdhaf2	ENSMUST00000237847	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024668	Sdhaf2	ENSMUST00000235222	ENSMUSP00000157533	TRANSLATION	protein_coding	-	-	-	166	0	2.255	0	86.8	0	-4,-1	-	-	12	MINOR
ENSMUSG00000024668	Sdhaf2	ENSMUST00000235853	ENSMUSP00000158361	TRANSLATION	nonsense_mediated_decay	-	-	-	42	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000024668	Sdhaf2	ENSMUST00000025570	ENSMUSP00000025570	TRANSLATION	protein_coding	-	CCDS29578.1	1	164	0	2.255	6.3	86.8	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000024668	Sdhaf2	ENSMUST00000236455	ENSMUSP00000158166	TRANSLATION	protein_coding	-	-	-	134	0	1.655	0	77.1	0	-3,1	-	-	9.732	MINOR
ENSMUSG00000039699	Batf2	ENSMUST00000237511	ENSMUSP00000158113	TRANSLATION	protein_coding	-	-	-	276	0	0.8	1.5	36.8	0	-4,-5	-	-	11.076	ALTERNATIVE:2
ENSMUSG00000039699	Batf2	ENSMUST00000135461	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039699	Batf2	ENSMUST00000141858	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039699	Batf2	ENSMUST00000134150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039699	Batf2	ENSMUST00000132750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039699	Batf2	ENSMUST00000139326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039699	Batf2	ENSMUST00000045042	ENSMUSP00000045744	TRANSLATION	protein_coding	-	CCDS29497.1	1	277	0	0.8	1.5	43.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000041180	Hectd2	ENSMUST00000155594	ENSMUSP00000120791	TRANSLATION	nonsense_mediated_decay	start	-	5	360	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041180	Hectd2	ENSMUST00000047247	ENSMUSP00000042646	TRANSLATION	protein_coding	-	CCDS29773.1	1	774	6	8.828	6.3	284	0	-4,-5	-	-	20	PRINCIPAL:3
ENSMUSG00000041180	Hectd2	ENSMUST00000141503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041180	Hectd2	ENSMUST00000149629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041180	Hectd2	ENSMUST00000142404	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041180	Hectd2	ENSMUST00000169036	ENSMUSP00000128387	TRANSLATION	protein_coding	-	CCDS50425.1	1	775	6	8.828	6.3	284	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000041180	Hectd2	ENSMUST00000139215	ENSMUSP00000117273	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041180	Hectd2	ENSMUST00000155447	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041180	Hectd2	ENSMUST00000177381	ENSMUSP00000134964	TRANSLATION	nonsense_mediated_decay	start	-	5	194	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000052562	Slc22a30	ENSMUST00000120540	ENSMUSP00000114071	TRANSLATION	protein_coding	-	-	1	438	0	2.798	0.5	68.4	15	-3,-7	-	-	9.588	MINOR
ENSMUSG00000052562	Slc22a30	ENSMUST00000096269	ENSMUSP00000093988	TRANSLATION	protein_coding	-	CCDS29536.1	1	552	0	3.34	0.5	87.8	18	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000052562	Slc22a30	ENSMUST00000064507	ENSMUSP00000069461	TRANSLATION	protein_coding	-	-	1	480	0	2.6	0	70.8	15	-3,-7	-	-	9.354	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000099782	ENSMUSP00000097370	TRANSLATION	protein_coding	-	CCDS50372.1	1	382	0	0	0.5	0	8	-1,0	-	-	0	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000025909	ENSMUSP00000025909	TRANSLATION	protein_coding	-	CCDS29512.1	1	396	0	0	8.8	0	19	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000024958	Gpr137	ENSMUST00000235237	ENSMUSP00000157604	TRANSLATION	nonsense_mediated_decay	-	-	-	236	0	0	0	0	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000238183	ENSMUSP00000158230	TRANSLATION	protein_coding	start	-	-	318	0	0	0	0	8	1,-3	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000099774	ENSMUSP00000097362	TRANSLATION	protein_coding	-	CCDS50370.1	1	214	0	0	0.5	0	4	-4,-6	-	-	0	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000166115	ENSMUSP00000130969	TRANSLATION	protein_coding	-	CCDS29512.1	1	396	0	0	8.8	0	19	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000024958	Gpr137	ENSMUST00000235881	ENSMUSP00000157950	TRANSLATION	nonsense_mediated_decay	-	-	-	131	0	0	0	0	0	-1,0	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000237911	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024958	Gpr137	ENSMUST00000235518	ENSMUSP00000157489	TRANSLATION	nonsense_mediated_decay	-	-	-	263	0	0	0	0	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000238128	ENSMUSP00000158431	TRANSLATION	nonsense_mediated_decay	start	-	-	162	0	0	0	0	11	-2,-5	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000099776	ENSMUSP00000097364	TRANSLATION	protein_coding	-	CCDS50371.1	1	304	0	0	0.5	0	15	-4,-5	-	-	0	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000235363	ENSMUSP00000157846	TRANSLATION	protein_coding	stop	-	-	85	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024958	Gpr137	ENSMUST00000237934	ENSMUSP00000158264	TRANSLATION	protein_coding	-	CCDS29512.1	-	396	0	0	8.8	0	19	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000024958	Gpr137	ENSMUST00000236348	ENSMUSP00000157999	TRANSLATION	nonsense_mediated_decay	-	-	-	54	0	0	0	0	0	0,1	-	-	-1	MINOR
ENSMUSG00000036278	Macrod1	ENSMUST00000040261	ENSMUSP00000039507	TRANSLATION	protein_coding	-	CCDS50376.1	1	323	19	6.36	5.3	138.1	0	-4,0	-	-	20	PRINCIPAL:1
ENSMUSG00000035049	Rrp12	ENSMUST00000038677	ENSMUSP00000039853	TRANSLATION	protein_coding	-	CCDS29814.1	1	1295	0	0	1.5	247.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024914	Drap1	ENSMUST00000126908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024914	Drap1	ENSMUST00000113673	ENSMUSP00000109303	TRANSLATION	protein_coding	-	-	2	162	0	2.1	0	47.1	0	-4,-5	-	-	8.406	MINOR
ENSMUSG00000024914	Drap1	ENSMUST00000025853	ENSMUSP00000025853	TRANSLATION	protein_coding	-	CCDS29462.1	1	205	0	2.93	3.9	68.9	0	-4,-6	-	-	13	PRINCIPAL:3
ENSMUSG00000024914	Drap1	ENSMUST00000136579	ENSMUSP00000133692	TRANSLATION	protein_coding	-	-	2	185	0	2.1	0	47.1	0	-4,-5	-	-	8.406	MINOR
ENSMUSG00000024914	Drap1	ENSMUST00000124478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024914	Drap1	ENSMUST00000148219	ENSMUSP00000121162	TRANSLATION	protein_coding	-	-	3	182	0	2.93	0	68.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000024914	Drap1	ENSMUST00000125468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024914	Drap1	ENSMUST00000127043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024914	Drap1	ENSMUST00000113674	ENSMUSP00000109304	TRANSLATION	protein_coding	-	CCDS70919.1	2	212	0	2.93	1.5	68.9	0	-4,-6	-	-	12.172	ALTERNATIVE:2
ENSMUSG00000024914	Drap1	ENSMUST00000134697	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041857	Oosp1	ENSMUST00000186557	ENSMUSP00000139444	TRANSLATION	protein_coding	-	-	2	50	0	0	0	0	0	4,-1	-	-	0	ALTERNATIVE:2
ENSMUSG00000041857	Oosp1	ENSMUST00000048214	ENSMUSP00000036529	TRANSLATION	protein_coding	-	CCDS29607.1	1	202	0	0	1.5	0	0	4,-1	-	-	0	PRINCIPAL:2
ENSMUSG00000041857	Oosp1	ENSMUST00000139158	ENSMUSP00000123469	TRANSLATION	nonsense_mediated_decay	-	-	1	92	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000010663	Fads1	ENSMUST00000235515	ENSMUSP00000158041	TRANSLATION	nonsense_mediated_decay	-	-	-	112	22	1.49	0	75.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000010663	Fads1	ENSMUST00000010807	ENSMUSP00000010807	TRANSLATION	protein_coding	-	CCDS29572.1	1	447	22	1.49	1.5	190.1	5	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000010663	Fads1	ENSMUST00000236594	ENSMUSP00000158468	TRANSLATION	protein_coding	stop	-	-	179	1	0.45	0	39.1	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000010663	Fads1	ENSMUST00000235160	ENSMUSP00000158460	TRANSLATION	protein_coding	-	-	-	410	13	0.8	0	173.5	5	-4,-7	-	-	8.226	MINOR
ENSMUSG00000010663	Fads1	ENSMUST00000237221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000010663	Fads1	ENSMUST00000237861	ENSMUSP00000157714	TRANSLATION	protein_coding	start	-	-	110	0	0	0	51.2	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000010663	Fads1	ENSMUST00000236385	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000010663	Fads1	ENSMUST00000238115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047658	Gal3st3	ENSMUST00000061169	ENSMUSP00000061517	TRANSLATION	protein_coding	-	CCDS29455.1	1	431	0	0	5.1	670.9	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000024851	Pitpnm1	ENSMUST00000236992	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000145214	ENSMUSP00000158424	TRANSLATION	nonsense_mediated_decay	start	-	5	85	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024851	Pitpnm1	ENSMUST00000145915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000100022	ENSMUSP00000097599	TRANSLATION	protein_coding	-	CCDS37883.1	1	1243	7	4.35	6.3	522.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024851	Pitpnm1	ENSMUST00000049658	ENSMUSP00000054309	TRANSLATION	protein_coding	-	CCDS37883.1	1	1243	7	4.35	6.3	522.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024851	Pitpnm1	ENSMUST00000131265	ENSMUSP00000120563	TRANSLATION	protein_coding	stop	-	5	252	0	4.35	0	374.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024851	Pitpnm1	ENSMUST00000139427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000237026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000125596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000151957	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000127056	ENSMUSP00000157582	TRANSLATION	nonsense_mediated_decay	start	-	3	143	7	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024851	Pitpnm1	ENSMUST00000128798	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024851	Pitpnm1	ENSMUST00000126620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024966	Stip1	ENSMUST00000025918	ENSMUSP00000025918	TRANSLATION	protein_coding	-	CCDS37901.1	1	543	0	11.05	15	175.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000236976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038274	Fau	ENSMUST00000043074	ENSMUSP00000042835	TRANSLATION	protein_coding	-	CCDS29489.1	1	133	0	3.58	19.5	163.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000179142	ENSMUSP00000136358	TRANSLATION	protein_coding	-	CCDS29489.1	1	133	0	3.58	19.5	163.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000178310	ENSMUSP00000136803	TRANSLATION	protein_coding	-	CCDS29489.1	1	133	0	3.58	19.5	163.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000237859	ENSMUSP00000157825	TRANSLATION	protein_coding	-	-	-	63	0	1.5	0	109.1	0	-4,-7	-	-	4.566	MINOR
ENSMUSG00000038274	Fau	ENSMUST00000236336	ENSMUSP00000158381	TRANSLATION	protein_coding	-	-	-	98	0	2.58	0	109.1	0	-4,-5	-	-	6.726	MINOR
ENSMUSG00000038274	Fau	ENSMUST00000236217	ENSMUSP00000157416	TRANSLATION	protein_coding	-	CCDS29489.1	-	133	0	3.58	19.5	163.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000237840	ENSMUSP00000157878	TRANSLATION	protein_coding	-	CCDS29489.1	-	133	0	3.58	19.5	163.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000038274	Fau	ENSMUST00000236021	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037477	Tbx10	ENSMUST00000041871	ENSMUSP00000037401	TRANSLATION	protein_coding	-	CCDS29407.1	1	385	0	4.35	0.5	263.8	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055523	Gucy2g	ENSMUST00000069183	ENSMUSP00000068253	TRANSLATION	protein_coding	-	CCDS38026.1	1	1100	0	10.56	1.5	476.1	0	-3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000071497	Nutf2-ps1	ENSMUST00000095978	ENSMUSP00000131850	TRANSLATION	protein_coding	-	-	-	127	0	1	19.5	114.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000045045	Lrfn4	ENSMUST00000053597	ENSMUSP00000050039	TRANSLATION	protein_coding	-	CCDS29431.1	1	636	0	0.36	1.5	176.1	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000045045	Lrfn4	ENSMUST00000113822	ENSMUSP00000109453	TRANSLATION	protein_coding	-	CCDS29431.1	1	636	0	0.36	1.5	176.1	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024993	Fam45a	ENSMUST00000147049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024993	Fam45a	ENSMUST00000025957	ENSMUSP00000025957	TRANSLATION	protein_coding	-	CCDS29942.1	1	357	0	0	7.6	29.5	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000024993	Fam45a	ENSMUST00000142375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024993	Fam45a	ENSMUST00000136146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024993	Fam45a	ENSMUST00000128357	ENSMUSP00000118461	TRANSLATION	protein_coding	stop	-	3	136	0	0	0	29.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024993	Fam45a	ENSMUST00000119633	ENSMUSP00000112839	TRANSLATION	protein_coding	-	CCDS84460.1	1	236	0	0	5.5	27.7	0	-4,-5	-	-	7.68	MINOR
ENSMUSG00000024993	Fam45a	ENSMUST00000148577	ENSMUSP00000121853	TRANSLATION	nonsense_mediated_decay	-	-	3	93	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025066	Sfr1	ENSMUST00000237695	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025066	Sfr1	ENSMUST00000099353	ENSMUSP00000096954	TRANSLATION	protein_coding	-	CCDS38019.1	1	319	0	0.42	0.5	234.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024790	Sac3d1	ENSMUST00000113533	ENSMUSP00000109161	TRANSLATION	protein_coding	-	CCDS37896.1	1	427	0	0.68	0.5	259	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096872	Scgb2a2	ENSMUST00000179814	ENSMUSP00000135964	TRANSLATION	protein_coding	-	-	5	96	0	0	0.5	68.5	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000056829	Foxb2	ENSMUST00000072915	ENSMUSP00000072687	TRANSLATION	protein_coding	-	CCDS29686.1	-	428	0	0.4	1.5	120.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024912	Fosl1	ENSMUST00000235958	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024912	Fosl1	ENSMUST00000025850	ENSMUSP00000025850	TRANSLATION	protein_coding	-	CCDS29464.1	1	273	0	1.4	1.5	30.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024912	Fosl1	ENSMUST00000236774	ENSMUSP00000158080	TRANSLATION	protein_coding	stop	-	-	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000101389	Ms4a4a	ENSMUST00000188995	ENSMUSP00000140768	TRANSLATION	protein_coding	-	CCDS79692.1	5	236	0	0	1.5	96.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000045395	Olfr1499	ENSMUST00000055672	ENSMUSP00000059747	TRANSLATION	protein_coding	-	CCDS29674.1	-	314	0	0.2	5.1	150.2	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000045395	Olfr1499	ENSMUST00000216659	ENSMUSP00000150330	TRANSLATION	protein_coding	-	CCDS29674.1	5	314	0	0.2	5.1	150.2	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000047632	Fgfbp3	ENSMUST00000238948	ENSMUSP00000159137	TRANSLATION	protein_coding	-	CCDS29774.2	-	250	0	0	1.5	187.8	0	1,-4	-	-	6	PRINCIPAL:2
ENSMUSG00000047632	Fgfbp3	ENSMUST00000057337	ENSMUSP00000059682	TRANSLATION	protein_coding	-	-	1	245	0	0	0	187.8	0	2,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000024837	Dmrt1	ENSMUST00000087525	ENSMUSP00000084803	TRANSLATION	protein_coding	-	-	5	257	8	1.6	0	150.9	0	-4,-5	-	-	15.306	MINOR
ENSMUSG00000024837	Dmrt1	ENSMUST00000025755	ENSMUSP00000025755	TRANSLATION	protein_coding	-	CCDS29717.1	1	374	8	1.6	3.9	195.8	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000024837	Dmrt1	ENSMUST00000160814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044040	Olfr1497	ENSMUST00000217384	ENSMUSP00000149151	TRANSLATION	protein_coding	-	CCDS29673.1	5	314	0	0.28	7.5	157.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000044040	Olfr1497	ENSMUST00000061993	ENSMUSP00000053465	TRANSLATION	protein_coding	-	CCDS29673.1	-	314	0	0.28	7.5	157.7	6	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000025224	Gbf1	ENSMUST00000175878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000176355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025224	Gbf1	ENSMUST00000175747	ENSMUSP00000134762	TRANSLATION	nonsense_mediated_decay	start	-	5	163	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025224	Gbf1	ENSMUST00000236167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000176422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000176992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025224	Gbf1	ENSMUST00000176853	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025224	Gbf1	ENSMUST00000176525	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025224	Gbf1	ENSMUST00000176046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000177406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000175868	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000026254	ENSMUSP00000026254	TRANSLATION	protein_coding	-	CCDS29873.1	1	1861	0	4.28	6.3	307.5	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025224	Gbf1	ENSMUST00000177512	ENSMUSP00000135850	TRANSLATION	nonsense_mediated_decay	start	-	5	117	0	2.33	0	130.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025224	Gbf1	ENSMUST00000176574	ENSMUSP00000159271	TRANSLATION	protein_coding	start/stop	-	3	187	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025224	Gbf1	ENSMUST00000175706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025224	Gbf1	ENSMUST00000176576	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046805	Mpeg1	ENSMUST00000081035	ENSMUSP00000108573	TRANSLATION	protein_coding	-	CCDS37926.1	1	720	0	0	1.5	112	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000025076	Casp7	ENSMUST00000237765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025076	Casp7	ENSMUST00000235178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025076	Casp7	ENSMUST00000235386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025076	Casp7	ENSMUST00000026062	ENSMUSP00000026062	TRANSLATION	protein_coding	-	CCDS29915.1	1	303	4	6.33	2.7	194	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025076	Casp7	ENSMUST00000237055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025076	Casp7	ENSMUST00000238892	ENSMUSP00000159062	TRANSLATION	protein_coding	stop	-	-	237	4	4.33	0	136	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004054	Map3k11	ENSMUST00000235661	ENSMUSP00000158271	TRANSLATION	protein_coding	stop	-	-	68	2	1.5	0	76.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004054	Map3k11	ENSMUST00000237032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004054	Map3k11	ENSMUST00000004156	ENSMUSP00000004156	TRANSLATION	protein_coding	-	CCDS29476.1	1	850	19	5.03	1.5	266.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000004054	Map3k11	ENSMUST00000235727	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004054	Map3k11	ENSMUST00000235891	ENSMUSP00000158463	TRANSLATION	nonsense_mediated_decay	start	-	-	543	19	5.03	0	213.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000026931	1700019N19Rik	ENSMUST00000166692	ENSMUSP00000126241	TRANSLATION	protein_coding	-	-	5	229	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000026931	1700019N19Rik	ENSMUST00000028299	ENSMUSP00000028299	TRANSLATION	protein_coding	-	CCDS38031.1	1	237	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000071645	Tut1	ENSMUST00000236564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071645	Tut1	ENSMUST00000237611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071645	Tut1	ENSMUST00000096239	ENSMUSP00000093958	TRANSLATION	protein_coding	-	CCDS29562.1	2	869	15	5.15	1.5	74.6	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000024683	Mrpl16	ENSMUST00000167199	ENSMUSP00000128915	TRANSLATION	protein_coding	-	CCDS29610.1	1	251	0	3.25	6.3	104.2	0	-3,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000024683	Mrpl16	ENSMUST00000237728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000048120	Entpd1	ENSMUST00000134063	ENSMUSP00000116285	TRANSLATION	protein_coding	-	CCDS79708.1	1	539	5	11.2386	0.5	558.3	3	-4,-5	-	-	17	ALTERNATIVE:2
ENSMUSG00000048120	Entpd1	ENSMUST00000151726	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048120	Entpd1	ENSMUST00000127268	ENSMUSP00000116895	TRANSLATION	protein_coding	start	-	3	235	4	4.39	0	233.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048120	Entpd1	ENSMUST00000127828	ENSMUSP00000117213	TRANSLATION	protein_coding	stop	-	3	63	0	2	0	70.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048120	Entpd1	ENSMUST00000160286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048120	Entpd1	ENSMUST00000155988	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048120	Entpd1	ENSMUST00000156598	ENSMUSP00000116349	TRANSLATION	nonsense_mediated_decay	-	-	5	288	5	5.9886	0	328.8	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000048120	Entpd1	ENSMUST00000144080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048120	Entpd1	ENSMUST00000112231	ENSMUSP00000107850	TRANSLATION	protein_coding	-	CCDS50434.1	1	510	5	11.2386	1.5	558.3	3	-4,-7	-	-	17	PRINCIPAL:3
ENSMUSG00000048120	Entpd1	ENSMUST00000137508	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048120	Entpd1	ENSMUST00000163023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071650	Ganab	ENSMUST00000096246	ENSMUSP00000093965	TRANSLATION	protein_coding	-	CCDS29557.1	1	966	0	22.5	1.7	574.5	0	2,1	-	-	12	PRINCIPAL:1
ENSMUSG00000071650	Ganab	ENSMUST00000235274	ENSMUSP00000158122	TRANSLATION	protein_coding	-	-	-	944	0	21.75	1.7	574.5	0	2,1	-	-	10.5	MINOR
ENSMUSG00000071650	Ganab	ENSMUST00000238063	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071650	Ganab	ENSMUST00000235704	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071650	Ganab	ENSMUST00000236499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071650	Ganab	ENSMUST00000236563	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045883	Olfr1461	ENSMUST00000053772	ENSMUSP00000053269	TRANSLATION	protein_coding	-	CCDS29652.1	-	312	0	0.64	1.5	185.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000045883	Olfr1461	ENSMUST00000208489	ENSMUSP00000146723	TRANSLATION	protein_coding	stop	-	3	129	0	0.48	0	77.7	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000045883	Olfr1461	ENSMUST00000207113	ENSMUSP00000146358	TRANSLATION	protein_coding	-	CCDS29652.1	2	312	0	0.64	1.5	185.1	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024682	Cblif	ENSMUST00000025585	ENSMUSP00000025585	TRANSLATION	protein_coding	-	CCDS29609.1	1	417	25	7.95	4.1	380.8	0	3,-2	-	-	19	PRINCIPAL:1
ENSMUSG00000018820	Zfyve27	ENSMUST00000164455	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018820	Zfyve27	ENSMUST00000166788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018820	Zfyve27	ENSMUST00000170184	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018820	Zfyve27	ENSMUST00000099443	ENSMUSP00000097042	TRANSLATION	protein_coding	-	CCDS50440.1	1	408	9	2.4	0.5	32.2	4	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000018820	Zfyve27	ENSMUST00000165783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000018820	Zfyve27	ENSMUST00000169536	ENSMUSP00000130684	TRANSLATION	protein_coding	-	CCDS29825.2	1	415	9	2.4	0.5	32.2	4	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000018820	Zfyve27	ENSMUST00000168130	ENSMUSP00000129561	TRANSLATION	protein_coding	stop	-	3	192	0	0	0	0	2	-2,-4	-	-	-1	MINOR
ENSMUSG00000018820	Zfyve27	ENSMUST00000164460	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035885	Cox8a	ENSMUST00000039758	ENSMUSP00000040717	TRANSLATION	protein_coding	-	CCDS29521.1	1	69	0	1.6	5.1	86.2	0	-4,0	-	-	14	PRINCIPAL:1
ENSMUSG00000035885	Cox8a	ENSMUST00000237087	ENSMUSP00000157524	TRANSLATION	nonsense_mediated_decay	-	-	-	43	0	0.6	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000025193	Cutc	ENSMUST00000112047	ENSMUSP00000107678	TRANSLATION	protein_coding	-	CCDS50443.1	1	272	0	7.66	7.5	262.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025193	Cutc	ENSMUST00000123564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025193	Cutc	ENSMUST00000026199	ENSMUSP00000026199	TRANSLATION	protein_coding	-	CCDS29837.1	1	262	0	7.33	1.5	229.8	0	-4,-5	-	-	9.585	MINOR
ENSMUSG00000025193	Cutc	ENSMUST00000153295	ENSMUSP00000118906	TRANSLATION	protein_coding	stop	-	3	254	0	7.16	0	262.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025225	Nfkb2	ENSMUST00000111881	ENSMUSP00000107512	TRANSLATION	protein_coding	-	CCDS29874.1	1	899	0	18.31	1.5	458.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025225	Nfkb2	ENSMUST00000237791	ENSMUSP00000158143	TRANSLATION	nonsense_mediated_decay	-	-	-	776	0	14.81	0	429.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025225	Nfkb2	ENSMUST00000235868	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025225	Nfkb2	ENSMUST00000237330	ENSMUSP00000157809	TRANSLATION	protein_coding	-	-	-	878	0	18.31	0	458.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025225	Nfkb2	ENSMUST00000236820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025225	Nfkb2	ENSMUST00000236591	ENSMUSP00000157542	TRANSLATION	protein_coding	-	CCDS29874.1	-	899	0	18.31	1.5	458.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000025225	Nfkb2	ENSMUST00000237761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025225	Nfkb2	ENSMUST00000073116	ENSMUSP00000072859	TRANSLATION	protein_coding	-	CCDS29874.1	1	899	0	18.31	1.5	458.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024780	Cdc37l1	ENSMUST00000223694	ENSMUSP00000153292	TRANSLATION	nonsense_mediated_decay	start	-	-	56	0	0.64	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024780	Cdc37l1	ENSMUST00000225310	ENSMUSP00000153192	TRANSLATION	protein_coding	-	-	-	307	0	3.98	1.5	78.8	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000024780	Cdc37l1	ENSMUST00000224599	ENSMUSP00000152901	TRANSLATION	protein_coding	-	-	-	263	0	3.34	0	66.8	0	-4,-5	-	-	9.408	MINOR
ENSMUSG00000024780	Cdc37l1	ENSMUST00000225598	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024780	Cdc37l1	ENSMUST00000224830	ENSMUSP00000153415	TRANSLATION	protein_coding	start	-	-	63	0	0.64	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024780	Cdc37l1	ENSMUST00000050148	ENSMUSP00000060421	TRANSLATION	protein_coding	-	CCDS29729.1	1	335	0	4.18	1.5	78.8	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024780	Cdc37l1	ENSMUST00000224092	ENSMUSP00000153067	TRANSLATION	protein_coding	start	-	-	113	0	2.14	0	28.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024780	Cdc37l1	ENSMUST00000225210	ENSMUSP00000153424	TRANSLATION	protein_coding	-	-	-	310	0	3.98	0	78.8	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000024780	Cdc37l1	ENSMUST00000224511	ENSMUSP00000152985	TRANSLATION	protein_coding	-	-	-	312	0	3.98	0.5	78.8	0	-4,-5	-	-	11.598	ALTERNATIVE:2
ENSMUSG00000041488	Stx3	ENSMUST00000211047	ENSMUSP00000147461	TRANSLATION	protein_coding	-	-	5	289	0	7.57	0	255.2	1	-4,-5	-	-	10.29	MINOR
ENSMUSG00000041488	Stx3	ENSMUST00000069285	ENSMUSP00000069529	TRANSLATION	protein_coding	-	CCDS29613.1	1	289	0	7.86	12.3	274	1	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041488	Stx3	ENSMUST00000210481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041488	Stx3	ENSMUST00000211641	ENSMUSP00000147398	TRANSLATION	protein_coding	-	CCDS29612.1	1	269	0	6.86	0.5	244.2	1	-4,-5	-	-	8.214	MINOR
ENSMUSG00000041488	Stx3	ENSMUST00000075304	ENSMUSP00000074776	TRANSLATION	protein_coding	-	CCDS29611.1	1	287	0	7.86	7.1	264.5	1	-4,-5	-	-	13.59	MINOR
ENSMUSG00000041488	Stx3	ENSMUST00000211089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041488	Stx3	ENSMUST00000209304	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041488	Stx3	ENSMUST00000047698	ENSMUSP00000037317	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	1.78	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024811	Tnks2	ENSMUST00000168654	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024811	Tnks2	ENSMUST00000168973	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024811	Tnks2	ENSMUST00000166677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024811	Tnks2	ENSMUST00000167533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024811	Tnks2	ENSMUST00000167724	ENSMUSP00000126888	TRANSLATION	protein_coding	start/stop	-	3	223	0	5.5	0	64.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024811	Tnks2	ENSMUST00000168718	ENSMUSP00000133253	TRANSLATION	protein_coding	start	-	2	170	0	3.68	0	78.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024811	Tnks2	ENSMUST00000025729	ENSMUSP00000025729	TRANSLATION	protein_coding	-	CCDS50426.1	5	1166	6	24.33	1.5	528.1	0	-2,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024811	Tnks2	ENSMUST00000168656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024811	Tnks2	ENSMUST00000164665	ENSMUSP00000132440	TRANSLATION	protein_coding	start/stop	-	5	327	0	5.382	0	143.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024868	Dkk1	ENSMUST00000025803	ENSMUSP00000025803	TRANSLATION	protein_coding	-	CCDS29744.1	1	272	0	1.2	1.5	64.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000116347	Gm49416	ENSMUST00000191089	ENSMUSP00000140564	TRANSLATION	protein_coding,RT	-	-	5	99	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000116347	Gm49416	ENSMUST00000188635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035818	Plekhs1	ENSMUST00000225391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035818	Plekhs1	ENSMUST00000178590	ENSMUSP00000136674	TRANSLATION	protein_coding	-	CCDS57148.1	1	474	12	0	0.5	27.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035818	Plekhs1	ENSMUST00000039666	ENSMUSP00000035440	TRANSLATION	protein_coding	-	CCDS29916.1	1	474	12	0	0.5	26.9	0	-4,-5	-	-	11.85	PRINCIPAL:3
ENSMUSG00000035818	Plekhs1	ENSMUST00000225909	ENSMUSP00000153530	TRANSLATION	protein_coding	stop	-	-	249	12	0	0	27.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035818	Plekhs1	ENSMUST00000224840	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035818	Plekhs1	ENSMUST00000225008	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053303	Slc22a26	ENSMUST00000065634	ENSMUSP00000064809	TRANSLATION	protein_coding	-	CCDS29533.1	1	552	0	2.34	0.5	77.7	12	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000053303	Slc22a26	ENSMUST00000120522	ENSMUSP00000113607	TRANSLATION	protein_coding	-	-	1	551	0	2.04	0.5	70	12	-4,-7	-	-	10.638	MINOR
ENSMUSG00000071658	Gng3	ENSMUST00000096259	ENSMUSP00000093978	TRANSLATION	protein_coding	-	CCDS29550.1	1	75	0	2	17.5	65.5	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025077	Dclre1a	ENSMUST00000182058	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025077	Dclre1a	ENSMUST00000183216	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025077	Dclre1a	ENSMUST00000182276	ENSMUSP00000138290	TRANSLATION	protein_coding	-	CCDS29917.2	1	1047	10	7.2	0.5	123.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025077	Dclre1a	ENSMUST00000183143	ENSMUSP00000138537	TRANSLATION	nonsense_mediated_decay	-	-	1	314	3	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025077	Dclre1a	ENSMUST00000181992	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025077	Dclre1a	ENSMUST00000182059	ENSMUSP00000138364	TRANSLATION	protein_coding	stop	-	2	97	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025026	Add3	ENSMUST00000235754	ENSMUSP00000157677	TRANSLATION	protein_coding	-	-	-	700	3	3.715	0	113.6	0	-4,-6	-	-	13.002	MINOR
ENSMUSG00000025026	Add3	ENSMUST00000237301	ENSMUSP00000158149	TRANSLATION	protein_coding	-	CCDS29900.1	-	706	3	4.09	8.8	134.4	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000025026	Add3	ENSMUST00000235846	ENSMUSP00000157970	TRANSLATION	protein_coding	-	CCDS50467.1	-	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000237153	ENSMUSP00000158206	TRANSLATION	protein_coding	stop	-	-	3	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025026	Add3	ENSMUST00000236417	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025026	Add3	ENSMUST00000237832	ENSMUSP00000157432	TRANSLATION	protein_coding	-	CCDS50467.1	-	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000236296	ENSMUSP00000157697	TRANSLATION	protein_coding	-	CCDS29900.1	-	706	3	4.09	8.8	134.4	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000025026	Add3	ENSMUST00000111741	ENSMUSP00000107370	TRANSLATION	protein_coding	-	CCDS50467.1	1	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000050096	ENSMUSP00000052245	TRANSLATION	protein_coding	-	CCDS50467.1	1	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000237430	ENSMUSP00000157955	TRANSLATION	protein_coding	-	CCDS29900.1	-	706	3	4.09	8.8	134.4	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000025026	Add3	ENSMUST00000238130	ENSMUSP00000158154	TRANSLATION	protein_coding	-	CCDS50467.1	-	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000235133	ENSMUSP00000157508	TRANSLATION	protein_coding	stop	-	-	38	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025026	Add3	ENSMUST00000237099	ENSMUSP00000158231	TRANSLATION	protein_coding	stop	-	-	189	0	1.35	0	23	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025026	Add3	ENSMUST00000237224	ENSMUSP00000158368	TRANSLATION	protein_coding	-	CCDS50467.1	-	674	3	4.09	7.5	134.4	0	-4,-6	-	-	17.499	ALTERNATIVE:1
ENSMUSG00000025026	Add3	ENSMUST00000025999	ENSMUSP00000025999	TRANSLATION	protein_coding	-	CCDS29900.1	1	706	3	4.09	8.8	134.4	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000025026	Add3	ENSMUST00000237593	ENSMUSP00000158538	TRANSLATION	protein_coding	stop	-	-	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024754	Cemip2	ENSMUST00000237802	ENSMUSP00000158262	TRANSLATION	protein_coding	stop	-	-	194	0	0	0	40.2	1	-4,-2	-	-	-1	MINOR
ENSMUSG00000024754	Cemip2	ENSMUST00000238079	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024754	Cemip2	ENSMUST00000025663	ENSMUSP00000025663	TRANSLATION	protein_coding	-	CCDS37934.1	1	1383	0	0.56	3.9	212.1	1	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000024754	Cemip2	ENSMUST00000236506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024754	Cemip2	ENSMUST00000096194	ENSMUSP00000093908	TRANSLATION	protein_coding	-	CCDS37934.1	5	1383	0	0.56	3.9	212.1	1	-4,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000074896	Ifit3	ENSMUST00000102825	ENSMUSP00000099889	TRANSLATION	protein_coding	-	CCDS29762.1	1	403	0	0.8	0.5	42.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050370	Ch25h	ENSMUST00000050562	ENSMUSP00000049683	TRANSLATION	protein_coding	-	CCDS29759.1	-	298	0	0	1.5	80.4	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025007	Aldh18a1	ENSMUST00000175967	ENSMUSP00000135419	TRANSLATION	protein_coding	start	-	1	100	0	2.09	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025007	Aldh18a1	ENSMUST00000176939	ENSMUSP00000135426	TRANSLATION	protein_coding	-	CCDS57144.1	1	793	11	14.1098	6.3	173.1	0	-4,0	-	-	20	ALTERNATIVE:1
ENSMUSG00000025007	Aldh18a1	ENSMUST00000149476	ENSMUSP00000115429	TRANSLATION	protein_coding	stop	-	3	173	4	1.5698	0	36.9	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025007	Aldh18a1	ENSMUST00000155613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025007	Aldh18a1	ENSMUST00000175932	ENSMUSP00000135417	TRANSLATION	protein_coding	stop	-	3	48	0	0.3	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025007	Aldh18a1	ENSMUST00000025979	ENSMUSP00000025979	TRANSLATION	protein_coding	-	CCDS29803.1	1	795	11	14.1098	6.3	172.1	0	-4,0	-	-	19.94	PRINCIPAL:3
ENSMUSG00000025007	Aldh18a1	ENSMUST00000134749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025007	Aldh18a1	ENSMUST00000176955	ENSMUSP00000135759	TRANSLATION	protein_coding	stop	-	3	83	0	1.5498	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037349	Nudt22	ENSMUST00000180765	ENSMUSP00000137738	TRANSLATION	protein_coding	-	CCDS29517.1	5	308	0	0	1.5	0	0	-2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000037349	Nudt22	ENSMUST00000041686	ENSMUSP00000041419	TRANSLATION	protein_coding	-	CCDS29517.1	1	308	0	0	1.5	0	0	-2,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000037349	Nudt22	ENSMUST00000180762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040663	Clcf1	ENSMUST00000126457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040663	Clcf1	ENSMUST00000046506	ENSMUSP00000045562	TRANSLATION	protein_coding	-	CCDS29423.1	1	225	0	0	5.3	0	0	1,-2	-	-	2	PRINCIPAL:1
ENSMUSG00000040663	Clcf1	ENSMUST00000235355	ENSMUSP00000157886	TRANSLATION	protein_coding	stop	-	-	40	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000040663	Clcf1	ENSMUST00000132305	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040663	Clcf1	ENSMUST00000138090	ENSMUSP00000118157	TRANSLATION	nonsense_mediated_decay	-	-	1	44	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024713	Pcsk5	ENSMUST00000237115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024713	Pcsk5	ENSMUST00000025618	ENSMUSP00000025618	TRANSLATION	protein_coding	-	CCDS50401.1	5	1877	18	14.49	0.5	457.8	0	-1,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024713	Pcsk5	ENSMUST00000050715	ENSMUSP00000050272	TRANSLATION	protein_coding	-	CCDS50402.1	1	915	18	12.93	1.5	447.4	0	-1,-5	-	-	14.256	MINOR
ENSMUSG00000024713	Pcsk5	ENSMUST00000235828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024713	Pcsk5	ENSMUST00000235505	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043639	Rbm20	ENSMUST00000164202	ENSMUSP00000129447	TRANSLATION	protein_coding	-	CCDS50468.1	5	1199	8	2	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000043639	Rbm20	ENSMUST00000161856	ENSMUSP00000124363	TRANSLATION	nonsense_mediated_decay	start	-	1	507	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000043639	Rbm20	ENSMUST00000162910	ENSMUSP00000158014	TRANSLATION	protein_coding	stop	-	2	68	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096320	Olfr1471	ENSMUST00000217482	ENSMUSP00000149948	TRANSLATION	protein_coding	-	CCDS29659.1	5	314	0	0.3	1.5	179	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096320	Olfr1471	ENSMUST00000213561	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096320	Olfr1471	ENSMUST00000213460	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096320	Olfr1471	ENSMUST00000096203	ENSMUSP00000093917	TRANSLATION	protein_coding	-	CCDS29659.1	-	314	0	0.3	1.5	179	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096320	Olfr1471	ENSMUST00000217249	ENSMUSP00000150749	TRANSLATION	protein_coding	-	CCDS29659.1	5	314	0	0.3	1.5	179	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034336	Ina	ENSMUST00000037636	ENSMUSP00000041347	TRANSLATION	protein_coding	-	CCDS38013.1	1	501	0	1.2	6.5	421.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000067524	Olfr1428	ENSMUST00000208391	ENSMUSP00000147015	TRANSLATION	protein_coding	-	-	3	88	0	0.62	0	0	3	-4,-7	-	-	3.384	MINOR
ENSMUSG00000067524	Olfr1428	ENSMUST00000214103	ENSMUSP00000150097	TRANSLATION	protein_coding	-	CCDS29622.1	5	314	0	1.1	6.3	146.2	7	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000067524	Olfr1428	ENSMUST00000087824	ENSMUSP00000085126	TRANSLATION	protein_coding	-	CCDS29622.1	-	314	0	1.1	6.3	146.2	7	-3,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000024795	Kif20b	ENSMUST00000225151	ENSMUSP00000153181	TRANSLATION	protein_coding	start	-	-	136	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024795	Kif20b	ENSMUST00000225625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024795	Kif20b	ENSMUST00000224381	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024795	Kif20b	ENSMUST00000223937	ENSMUSP00000153193	TRANSLATION	nonsense_mediated_decay	start	-	-	214	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024795	Kif20b	ENSMUST00000223907	ENSMUSP00000153034	TRANSLATION	protein_coding	-	-	-	1734	11	8.914	0.5	318.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000024795	Kif20b	ENSMUST00000224728	ENSMUSP00000153020	TRANSLATION	nonsense_mediated_decay	start	-	-	51	0	1.25	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024795	Kif20b	ENSMUST00000087341	ENSMUSP00000084599	TRANSLATION	protein_coding	-	CCDS37967.1	5	1774	11	8.914	0.5	318.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024795	Kif20b	ENSMUST00000224603	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024795	Kif20b	ENSMUST00000223776	ENSMUSP00000152994	TRANSLATION	protein_coding	stop	-	-	207	10	3.584	0	90.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024795	Kif20b	ENSMUST00000225408	ENSMUSP00000153592	TRANSLATION	nonsense_mediated_decay	start	-	-	40	7	1	0	32.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051156	Olfr1491	ENSMUST00000216622	ENSMUSP00000149884	TRANSLATION	protein_coding	-	CCDS29669.1	5	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051156	Olfr1491	ENSMUST00000214007	ENSMUSP00000151038	TRANSLATION	protein_coding	-	CCDS29669.1	5	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051156	Olfr1491	ENSMUST00000216377	ENSMUSP00000148862	TRANSLATION	protein_coding	-	CCDS29669.1	5	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051156	Olfr1491	ENSMUST00000052737	ENSMUSP00000057902	TRANSLATION	protein_coding	-	CCDS29669.1	-	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051156	Olfr1491	ENSMUST00000216366	ENSMUSP00000149071	TRANSLATION	protein_coding	-	CCDS29669.1	5	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000051156	Olfr1491	ENSMUST00000215493	ENSMUSP00000150165	TRANSLATION	protein_coding	-	CCDS29669.1	5	319	0	0.42	4.1	176	7	-4,-6	-	-	13	PRINCIPAL:1
ENSMUSG00000006456	Rbm14	ENSMUST00000006625	ENSMUSP00000006625	TRANSLATION	protein_coding	-	CCDS29437.1	1	669	0	0.8	7.5	101.4	0	-4,-5	-	-	13.512	PRINCIPAL:1
ENSMUSG00000006456	Rbm14	ENSMUST00000180008	ENSMUSP00000137466	TRANSLATION	protein_coding	-	-	5	119	0	1.064	1.2	67.6	0	-4,-5	-	-	10.065	MINOR
ENSMUSG00000006456	Rbm14	ENSMUST00000113793	ENSMUSP00000109424	TRANSLATION	protein_coding	-	-	1	614	0	0.8	0	101.4	0	-4,-5	-	-	10.512	MINOR
ENSMUSG00000042729	Wdr74	ENSMUST00000237673	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042729	Wdr74	ENSMUST00000049424	ENSMUSP00000043315	TRANSLATION	protein_coding	-	CCDS29541.1	1	384	0	2.73	6.3	13.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000042729	Wdr74	ENSMUST00000236946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042729	Wdr74	ENSMUST00000237017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042729	Wdr74	ENSMUST00000238116	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042729	Wdr74	ENSMUST00000237531	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042729	Wdr74	ENSMUST00000210592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042729	Wdr74	ENSMUST00000210512	ENSMUSP00000147765	TRANSLATION	protein_coding	-	-	1	340	0	2.43	1	13.7	0	-4,-7	-	-	11.34	MINOR
ENSMUSG00000094936	Rbm4	ENSMUST00000179189	ENSMUSP00000137174	TRANSLATION	protein_coding	-	CCDS29436.1	2	361	0	2	1.5	151.9	0	-4,-5	-	-	12.231	PRINCIPAL:1
ENSMUSG00000094936	Rbm4	ENSMUST00000237760	ENSMUSP00000158402	TRANSLATION	protein_coding	-	-	-	229	0	1	0	116.1	0	-4,-5	-	-	6.852	MINOR
ENSMUSG00000094936	Rbm4	ENSMUST00000178615	ENSMUSP00000136254	TRANSLATION	protein_coding	-	CCDS79671.1	1	143	0	1	7.5	117.9	0	-4,-5	-	-	9.96	MINOR
ENSMUSG00000094936	Rbm4	ENSMUST00000180248	ENSMUSP00000137345	TRANSLATION	protein_coding	-	CCDS29436.1	1	361	0	2	1.5	151.9	0	-4,-5	-	-	12.231	PRINCIPAL:1
ENSMUSG00000094936	Rbm4	ENSMUST00000164209	ENSMUSP00000129745	TRANSLATION	protein_coding	-	CCDS79671.1	1	143	0	1	7.5	117.9	0	-4,-5	-	-	9.96	MINOR
ENSMUSG00000094936	Rbm4	ENSMUST00000179820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094936	Rbm4	ENSMUST00000164376	ENSMUSP00000127564	TRANSLATION	protein_coding	stop	-	3	172	0	2	0	141	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034371	Tkfc	ENSMUST00000236607	ENSMUSP00000157520	TRANSLATION	protein_coding	-	CCDS37914.1	-	578	12	9.546	7.5	534.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000034371	Tkfc	ENSMUST00000236478	ENSMUSP00000158426	TRANSLATION	protein_coding	stop	-	-	162	8	2.8	0	187.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034371	Tkfc	ENSMUST00000037678	ENSMUSP00000044556	TRANSLATION	protein_coding	-	CCDS37914.1	1	578	12	9.546	7.5	534.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000034371	Tkfc	ENSMUST00000236950	ENSMUSP00000158068	TRANSLATION	protein_coding	-	CCDS37914.1	-	578	12	9.546	7.5	534.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000034371	Tkfc	ENSMUST00000236121	ENSMUSP00000158478	TRANSLATION	nonsense_mediated_decay	-	-	-	182	8	3.2	0	209.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034371	Tkfc	ENSMUST00000235285	ENSMUSP00000157881	TRANSLATION	nonsense_mediated_decay	-	-	-	182	8	3.2	0	209.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034371	Tkfc	ENSMUST00000237788	ENSMUSP00000158115	TRANSLATION	protein_coding	-	-	-	527	12	8.746	0	479.7	0	-4,-5	-	-	13.116	MINOR
ENSMUSG00000025228	Actr1a	ENSMUST00000237742	ENSMUSP00000158413	TRANSLATION	protein_coding	-	-	-	332	22	7	0	330.9	0	-4,-5	-	-	6.006	MINOR
ENSMUSG00000025228	Actr1a	ENSMUST00000040270	ENSMUSP00000039844	TRANSLATION	protein_coding	-	CCDS29878.1	1	376	24	9.33	19.5	442.2	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000025228	Actr1a	ENSMUST00000235752	ENSMUSP00000157773	TRANSLATION	nonsense_mediated_decay	-	-	-	52	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025228	Actr1a	ENSMUST00000236117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025228	Actr1a	ENSMUST00000237477	ENSMUSP00000158084	TRANSLATION	nonsense_mediated_decay	-	-	-	42	6	1.25	0	36.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025228	Actr1a	ENSMUST00000236814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025228	Actr1a	ENSMUST00000237952	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000018822	Sfrp5	ENSMUST00000018966	ENSMUSP00000018966	TRANSLATION	protein_coding	-	CCDS29826.1	1	314	0	0.6	1.5	143.9	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000051490	Foxd4	ENSMUST00000058600	ENSMUSP00000058575	TRANSLATION	protein_coding	-	CCDS29715.1	-	444	0	0.4	0.5	125.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040901	Kcnk18	ENSMUST00000065204	ENSMUSP00000065713	TRANSLATION	protein_coding	-	CCDS29934.1	1	394	0	0.88	0.5	118.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024774	Ankrd22	ENSMUST00000160474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024774	Ankrd22	ENSMUST00000025686	ENSMUSP00000025686	TRANSLATION	protein_coding	-	CCDS37963.1	1	191	0	4.016	6.4	75.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000024774	Ankrd22	ENSMUST00000159887	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024867	Pip5k1b	ENSMUST00000145829	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024867	Pip5k1b	ENSMUST00000025800	ENSMUSP00000025800	TRANSLATION	protein_coding	-	CCDS37940.1	1	539	2	7.15	10.8	311.3	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000024867	Pip5k1b	ENSMUST00000112673	ENSMUSP00000108292	TRANSLATION	protein_coding	-	-	1	487	2	7.15	0	311.3	0	-4,-5	-	-	14	MINOR
ENSMUSG00000024867	Pip5k1b	ENSMUST00000156814	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024867	Pip5k1b	ENSMUST00000134360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079419	Ms4a6c	ENSMUST00000187462	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079419	Ms4a6c	ENSMUST00000165310	ENSMUSP00000132425	TRANSLATION	protein_coding	-	CCDS50395.1	1	217	0	0	0.5	149.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024856	Cdk2ap2	ENSMUST00000172914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024856	Cdk2ap2	ENSMUST00000025779	ENSMUSP00000025779	TRANSLATION	protein_coding	-	CCDS29414.1	1	127	0	1.75	8.8	75.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024856	Cdk2ap2	ENSMUST00000174514	ENSMUSP00000134093	TRANSLATION	protein_coding	-	-	2	107	0	1	1.2	39.9	0	-4,-6	-	-	6.66	MINOR
ENSMUSG00000024856	Cdk2ap2	ENSMUST00000174149	ENSMUSP00000134613	TRANSLATION	protein_coding	-	-	2	59	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024856	Cdk2ap2	ENSMUST00000174799	ENSMUSP00000133593	TRANSLATION	nonsense_mediated_decay	-	-	2	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025014	Dntt	ENSMUST00000112200	ENSMUSP00000107819	TRANSLATION	protein_coding	-	CCDS37984.1	1	510	6	10.25	5.1	234.9	0	-4,-2	-	-	19.52	PRINCIPAL:1
ENSMUSG00000025014	Dntt	ENSMUST00000051806	ENSMUSP00000062078	TRANSLATION	protein_coding	-	CCDS29807.1	1	530	6	10.49	0.5	234.1	0	-4,-2	-	-	17.952	MINOR
ENSMUSG00000025014	Dntt	ENSMUST00000237959	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061637	Olfr1457	ENSMUST00000075170	ENSMUSP00000074665	TRANSLATION	protein_coding	-	CCDS29650.1	-	317	0	0	8.8	153	10	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000061637	Olfr1457	ENSMUST00000215229	ENSMUSP00000150957	TRANSLATION	protein_coding	-	CCDS29650.1	5	317	0	0	8.8	153	10	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000061637	Olfr1457	ENSMUST00000214561	ENSMUSP00000149056	TRANSLATION	protein_coding	-	-	5	144	0	0	0	66.4	7	-4,-5	-	-	0.804	MINOR
ENSMUSG00000061637	Olfr1457	ENSMUST00000208913	ENSMUSP00000147066	TRANSLATION	protein_coding	stop	-	5	57	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000024654	Asrgl1	ENSMUST00000150353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024654	Asrgl1	ENSMUST00000049948	ENSMUSP00000051709	TRANSLATION	protein_coding	-	CCDS29566.1	1	326	19	6	0.5	358.7	0	-3,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000024797	Vps51	ENSMUST00000160590	ENSMUSP00000123857	TRANSLATION	protein_coding	-	-	1	140	0	0	0	56.7	0	-4,-5	-	-	4.074	MINOR
ENSMUSG00000024797	Vps51	ENSMUST00000161634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000236983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000159869	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000160519	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000159475	ENSMUSP00000124244	TRANSLATION	protein_coding	start/stop	-	3	120	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024797	Vps51	ENSMUST00000161222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000160233	ENSMUSP00000124842	TRANSLATION	nonsense_mediated_decay	-	-	5	81	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024797	Vps51	ENSMUST00000160324	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024797	Vps51	ENSMUST00000025711	ENSMUSP00000025711	TRANSLATION	protein_coding	-	CCDS37894.1	1	782	0	0	0.5	83.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024797	Vps51	ENSMUST00000159211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096740	Lbhd1	ENSMUST00000187504	ENSMUSP00000139692	TRANSLATION	protein_coding,RT	-	CCDS79682.1	3	259	0	0	1.5	141.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000096740	Lbhd1	ENSMUST00000189165	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096740	Lbhd1	ENSMUST00000190530	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024952	Rps6ka4	ENSMUST00000237217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024952	Rps6ka4	ENSMUST00000236175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024952	Rps6ka4	ENSMUST00000237303	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024952	Rps6ka4	ENSMUST00000170516	ENSMUSP00000131581	TRANSLATION	protein_coding	-	CCDS37899.1	1	773	37	15.18	7.5	465.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024952	Rps6ka4	ENSMUST00000237793	ENSMUSP00000158132	TRANSLATION	nonsense_mediated_decay	-	-	-	50	1	1.23	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024952	Rps6ka4	ENSMUST00000025903	ENSMUSP00000025903	TRANSLATION	protein_coding	-	CCDS37899.1	1	773	37	15.18	7.5	465.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024952	Rps6ka4	ENSMUST00000237442	ENSMUSP00000157597	TRANSLATION	protein_coding	-	CCDS37899.1	-	773	37	15.18	7.5	465.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024952	Rps6ka4	ENSMUST00000236334	ENSMUSP00000157396	TRANSLATION	nonsense_mediated_decay	-	-	-	48	2	0.73	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025019	Lcor	ENSMUST00000163929	ENSMUSP00000126441	TRANSLATION	protein_coding	-	CCDS29810.1	1	433	0	1	7.3	52.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000025019	Lcor	ENSMUST00000238398	ENSMUSP00000158715	TRANSLATION	protein_coding	-	-	-	1696	0	0	0.5	582.3	0	-4,-7	-	-	6	MINOR
ENSMUSG00000025019	Lcor	ENSMUST00000237208	ENSMUSP00000157765	TRANSLATION	protein_coding	stop	-	-	396	0	0.4	0	52.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025019	Lcor	ENSMUST00000237976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025019	Lcor	ENSMUST00000067795	ENSMUSP00000067603	TRANSLATION	protein_coding	-	CCDS29810.1	1	433	0	1	7.3	52.4	0	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000025019	Lcor	ENSMUST00000238431	ENSMUSP00000158618	TRANSLATION	protein_coding	-	-	-	1563	0	0	0	582.3	0	-4,-6	-	-	6	MINOR
ENSMUSG00000025019	Lcor	ENSMUST00000172371	ENSMUSP00000128083	TRANSLATION	protein_coding	start	-	5	1242	0	0	0	582.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000235763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000237320	ENSMUSP00000158552	TRANSLATION	protein_coding	stop	-	-	106	0	0	0	0	0	1,-2	-	-	-1	MINOR
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000237955	ENSMUSP00000158133	TRANSLATION	protein_coding	-	CCDS50342.1	-	392	0	0	0.5	0	1	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000235295	ENSMUSP00000157453	TRANSLATION	protein_coding	-	CCDS50342.1	-	392	0	0	0.5	0	1	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000039048	ENSMUSP00000047063	TRANSLATION	protein_coding	-	CCDS50342.1	1	392	0	0	0.5	0	1	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000035372	1810055G02Rik	ENSMUST00000235837	ENSMUSP00000158554	TRANSLATION	protein_coding	-	CCDS50342.1	-	392	0	0	0.5	0	1	1,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000024812	Tjp2	ENSMUST00000233658	ENSMUSP00000156728	TRANSLATION	protein_coding	-	CCDS37939.1	-	1167	0	12.9	1.5	228.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024812	Tjp2	ENSMUST00000236570	ENSMUSP00000157619	TRANSLATION	protein_coding	stop	-	-	171	0	3.1	0	60.5	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024812	Tjp2	ENSMUST00000233027	ENSMUSP00000156605	TRANSLATION	protein_coding	-	-	-	1190	0	12.9	1.5	228.5	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024812	Tjp2	ENSMUST00000237550	ENSMUSP00000157949	TRANSLATION	protein_coding	stop	-	-	53	0	1.5	0	28.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024812	Tjp2	ENSMUST00000237937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024812	Tjp2	ENSMUST00000232956	ENSMUSP00000156896	TRANSLATION	protein_coding	-	-	-	1165	0	12.9	1.5	228.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024812	Tjp2	ENSMUST00000099558	ENSMUSP00000097154	TRANSLATION	protein_coding	-	CCDS37939.1	1	1167	0	12.9	1.5	228.5	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000005986	Ankrd13d	ENSMUST00000169653	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005986	Ankrd13d	ENSMUST00000167215	ENSMUSP00000128037	TRANSLATION	protein_coding	-	-	3	150	0	2.504	0	36.3	0	-4,-2	-	-	6	MINOR
ENSMUSG00000005986	Ankrd13d	ENSMUST00000056888	ENSMUSP00000053783	TRANSLATION	protein_coding	-	CCDS50351.1	1	605	0	2.504	6.3	388.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000005986	Ankrd13d	ENSMUST00000166031	ENSMUSP00000130505	TRANSLATION	nonsense_mediated_decay	start	-	3	79	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000005986	Ankrd13d	ENSMUST00000170283	ENSMUSP00000126349	TRANSLATION	nonsense_mediated_decay	start	-	3	98	0	0	0	76.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000005986	Ankrd13d	ENSMUST00000163858	ENSMUSP00000128932	TRANSLATION	nonsense_mediated_decay	-	-	1	83	0	1.64	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000117789	Gm50388	ENSMUST00000236560	ENSMUSP00000158273	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	415	0	0	7.5	344.3	0	1,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000034445	Cyb561a3	ENSMUST00000237564	ENSMUSP00000157662	TRANSLATION	protein_coding	stop	-	-	61	0	0.2	0	0	3	0,-4	-	-	-1	MINOR
ENSMUSG00000034445	Cyb561a3	ENSMUST00000237641	ENSMUSP00000157602	TRANSLATION	protein_coding	-	-	-	257	0	2.89	0.5	151.3	9	-1,-5	-	-	12	MINOR
ENSMUSG00000034445	Cyb561a3	ENSMUST00000236743	ENSMUSP00000157545	TRANSLATION	protein_coding	stop	-	-	15	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000034445	Cyb561a3	ENSMUST00000168445	ENSMUSP00000130680	TRANSLATION	protein_coding	-	CCDS29582.1	5	242	0	2.89	7.8	151.3	9	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034445	Cyb561a3	ENSMUST00000236352	ENSMUSP00000157892	TRANSLATION	protein_coding	-	-	-	263	0	2.89	0	151.3	9	-1,-5	-	-	12	MINOR
ENSMUSG00000034445	Cyb561a3	ENSMUST00000236747	ENSMUSP00000158021	TRANSLATION	nonsense_mediated_decay	-	-	-	106	0	0.84	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000034445	Cyb561a3	ENSMUST00000237814	ENSMUSP00000158186	TRANSLATION	protein_coding	-	CCDS29582.1	-	242	0	2.89	7.8	151.3	9	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034445	Cyb561a3	ENSMUST00000237581	ENSMUSP00000157884	TRANSLATION	protein_coding	-	CCDS29582.1	-	242	0	2.89	7.8	151.3	9	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034445	Cyb561a3	ENSMUST00000235271	ENSMUSP00000157672	TRANSLATION	protein_coding	-	CCDS29582.1	-	242	0	2.89	7.8	151.3	9	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025036	Sfxn2	ENSMUST00000238124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025036	Sfxn2	ENSMUST00000026011	ENSMUSP00000026011	TRANSLATION	protein_coding	-	CCDS29880.1	1	322	0	0	6.3	452.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000025036	Sfxn2	ENSMUST00000237001	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025036	Sfxn2	ENSMUST00000236845	ENSMUSP00000157818	TRANSLATION	nonsense_mediated_decay	-	-	-	183	0	0	0.5	238.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025036	Sfxn2	ENSMUST00000237310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024732	Ccdc86	ENSMUST00000189018	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024732	Ccdc86	ENSMUST00000025639	ENSMUSP00000025639	TRANSLATION	protein_coding	-	CCDS29593.1	1	426	0	0	0.5	53.6	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000024732	Ccdc86	ENSMUST00000133836	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060049	Olfr235	ENSMUST00000214638	ENSMUSP00000149035	TRANSLATION	protein_coding	-	CCDS29626.1	5	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060049	Olfr235	ENSMUST00000207969	ENSMUSP00000146532	TRANSLATION	protein_coding	-	CCDS29626.1	3	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060049	Olfr235	ENSMUST00000073507	ENSMUSP00000073203	TRANSLATION	protein_coding	-	CCDS29626.1	-	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060049	Olfr235	ENSMUST00000214613	ENSMUSP00000151073	TRANSLATION	protein_coding	-	CCDS29626.1	3	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060049	Olfr235	ENSMUST00000215407	ENSMUSP00000150313	TRANSLATION	protein_coding	-	CCDS29626.1	5	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000060049	Olfr235	ENSMUST00000214551	ENSMUSP00000150872	TRANSLATION	protein_coding	-	CCDS29626.1	5	312	0	0	5.1	187.1	4	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000057858	Fam204a	ENSMUST00000238054	ENSMUSP00000158259	TRANSLATION	protein_coding	-	CCDS29939.1	-	236	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000057858	Fam204a	ENSMUST00000237339	ENSMUSP00000157433	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057858	Fam204a	ENSMUST00000235293	ENSMUSP00000158173	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057858	Fam204a	ENSMUST00000238119	ENSMUSP00000157480	TRANSLATION	nonsense_mediated_decay	-	-	-	83	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057858	Fam204a	ENSMUST00000237120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057858	Fam204a	ENSMUST00000065286	ENSMUSP00000063913	TRANSLATION	protein_coding	-	CCDS29939.1	1	236	0	0	7.5	0	0	-4,-5	-	-	3	PRINCIPAL:1
ENSMUSG00000057858	Fam204a	ENSMUST00000235995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024913	Lrp5	ENSMUST00000177330	ENSMUSP00000134983	TRANSLATION	nonsense_mediated_decay	-	-	2	279	0	2.16	0	111.8	0	0,-2	-	-	-1	MINOR
ENSMUSG00000024913	Lrp5	ENSMUST00000177294	ENSMUSP00000134771	TRANSLATION	nonsense_mediated_decay	start	-	1	226	0	3	0	150.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024913	Lrp5	ENSMUST00000025856	ENSMUSP00000025856	TRANSLATION	protein_coding	-	CCDS37881.1	1	1614	14	19.57	1.5	729.7	0	0,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024913	Lrp5	ENSMUST00000176867	ENSMUSP00000135654	TRANSLATION	protein_coding	-	-	1	618	0	7.66	0	338.5	0	0,-2	-	-	0	MINOR
ENSMUSG00000071652	Ints5	ENSMUST00000096249	ENSMUSP00000093968	TRANSLATION	protein_coding	-	CCDS29556.1	1	1018	0	0	6.3	1080.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000071573	Rnls	ENSMUST00000096114	-	NO_TRANSLATION	polymorphic_pseudogene
ENSMUSG00000071573	Rnls	ENSMUST00000163093	ENSMUSP00000127592	TRANSLATION	protein_coding	-	CCDS50415.1	1	182	12	3.5	0.5	0	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025226	Fbxl15	ENSMUST00000177667	ENSMUSP00000137489	TRANSLATION	protein_coding	-	CCDS38007.1	1	300	0	0.8	5.1	36.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000025226	Fbxl15	ENSMUST00000026256	ENSMUSP00000026256	TRANSLATION	protein_coding	-	CCDS38007.1	1	300	0	0.8	5.1	36.3	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000051984	Sec31b	ENSMUST00000165758	ENSMUSP00000130598	TRANSLATION	nonsense_mediated_decay	start	-	5	59	0	0.24	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000051984	Sec31b	ENSMUST00000063632	ENSMUSP00000064900	TRANSLATION	protein_coding	-	CCDS37997.1	5	1158	0	7.923	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051984	Sec31b	ENSMUST00000111985	ENSMUSP00000107616	TRANSLATION	protein_coding	-	-	1	1001	0	5.743	0	0	0	-4,-5	-	-	1.638	MINOR
ENSMUSG00000024833	Pola2	ENSMUST00000235224	ENSMUSP00000157450	TRANSLATION	protein_coding	stop	-	-	178	0	4.58	0	23.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024833	Pola2	ENSMUST00000237735	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000235535	ENSMUSP00000157566	TRANSLATION	protein_coding	start	-	-	417	0	9.75	0	188.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024833	Pola2	ENSMUST00000237136	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000165143	ENSMUSP00000128866	TRANSLATION	protein_coding	-	CCDS50362.1	1	566	0	14.58	0.5	214.3	0	-4,-5	-	-	10.398	MINOR
ENSMUSG00000024833	Pola2	ENSMUST00000235790	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000236176	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000025752	ENSMUSP00000025752	TRANSLATION	protein_coding	-	CCDS29485.1	1	600	0	15.38	3.9	214.3	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000024833	Pola2	ENSMUST00000238043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000238075	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024833	Pola2	ENSMUST00000235426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024833	Pola2	ENSMUST00000236013	ENSMUSP00000157865	TRANSLATION	protein_coding	stop	-	-	70	0	2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024833	Pola2	ENSMUST00000236089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053799	Exoc6	ENSMUST00000066439	ENSMUSP00000064332	TRANSLATION	protein_coding	-	CCDS29779.1	1	804	0	6.91	2.8	354.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000053799	Exoc6	ENSMUST00000238954	ENSMUSP00000158866	TRANSLATION	protein_coding	-	-	-	811	0	6.91	1.5	354.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000053799	Exoc6	ENSMUST00000238817	ENSMUSP00000159143	TRANSLATION	protein_coding	-	-	-	802	0	6.91	2.8	354.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000035342	Lzts2	ENSMUST00000237043	ENSMUSP00000158403	TRANSLATION	protein_coding	-	-	-	283	0	0	0	76.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000035342	Lzts2	ENSMUST00000236377	ENSMUSP00000158363	TRANSLATION	protein_coding	stop	-	-	270	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035342	Lzts2	ENSMUST00000179108	ENSMUSP00000137571	TRANSLATION	protein_coding	-	CCDS29855.1	1	671	0	0	1.5	227	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035342	Lzts2	ENSMUST00000237148	ENSMUSP00000157464	TRANSLATION	protein_coding	stop	-	-	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035342	Lzts2	ENSMUST00000237396	ENSMUSP00000158169	TRANSLATION	protein_coding	stop	-	-	42	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035342	Lzts2	ENSMUST00000039016	ENSMUSP00000045478	TRANSLATION	protein_coding	-	CCDS29855.1	1	671	0	0	1.5	227	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035342	Lzts2	ENSMUST00000178087	ENSMUSP00000136405	TRANSLATION	protein_coding	-	CCDS29855.1	1	671	0	0	1.5	227	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035342	Lzts2	ENSMUST00000236512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024870	Rab1b	ENSMUST00000237438	ENSMUSP00000157879	TRANSLATION	protein_coding	-	-	-	182	15	5.58	0	179.4	0	-4,-7	-	-	11.76	MINOR
ENSMUSG00000024870	Rab1b	ENSMUST00000025804	ENSMUSP00000025804	TRANSLATION	protein_coding	-	CCDS29452.1	1	201	19	6.08	19.5	222.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024870	Rab1b	ENSMUST00000237201	ENSMUSP00000157487	TRANSLATION	protein_coding	stop	-	-	254	19	5.75	0	222.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024870	Rab1b	ENSMUST00000236149	ENSMUSP00000158567	TRANSLATION	protein_coding	-	-	-	189	19	4.16	0	180.3	0	-4,-7	-	-	11.64	MINOR
ENSMUSG00000024807	Syvn1	ENSMUST00000144328	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024807	Syvn1	ENSMUST00000138532	ENSMUSP00000114843	TRANSLATION	protein_coding	-	CCDS29487.1	1	612	8	1.75	3.9	41.2	6	2,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000024807	Syvn1	ENSMUST00000025723	ENSMUSP00000025723	TRANSLATION	protein_coding	-	-	5	561	8	1.75	0	41.2	4	2,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000024807	Syvn1	ENSMUST00000142101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024807	Syvn1	ENSMUST00000235478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024807	Syvn1	ENSMUST00000129081	ENSMUSP00000118698	TRANSLATION	protein_coding	stop	-	3	160	0	0	0	0	5	2,-2	-	-	-1	MINOR
ENSMUSG00000024807	Syvn1	ENSMUST00000156550	ENSMUSP00000121885	TRANSLATION	protein_coding	-	-	5	608	8	1.75	1.5	41.2	6	2,-2	-	-	18.172	ALTERNATIVE:2
ENSMUSG00000024807	Syvn1	ENSMUST00000134667	ENSMUSP00000114960	TRANSLATION	protein_coding	-	CCDS29487.1	1	612	8	1.75	3.9	41.2	6	2,-2	-	-	19	PRINCIPAL:2
ENSMUSG00000024696	Lpxn	ENSMUST00000025601	ENSMUSP00000025601	TRANSLATION	protein_coding	-	CCDS29638.1	1	386	27	3.36	0.5	223.3	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000024696	Lpxn	ENSMUST00000235690	ENSMUSP00000157548	TRANSLATION	protein_coding	-	-	-	290	27	3.36	1.7	223.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000055933	Oosp3	ENSMUST00000119053	ENSMUSP00000112874	TRANSLATION	protein_coding	-	-	1	97	2	0.12	0	0	0	-4,-6	-	-	2.678	MINOR
ENSMUSG00000055933	Oosp3	ENSMUST00000069760	ENSMUSP00000064913	TRANSLATION	protein_coding	-	CCDS29608.1	1	195	2	1.06	0.5	0	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000024986	Hhex	ENSMUST00000128184	ENSMUSP00000133688	TRANSLATION	protein_coding	-	-	2	98	0	0.83	0	34.2	0	-4,-2	-	-	5.532	MINOR
ENSMUSG00000024986	Hhex	ENSMUST00000025944	ENSMUSP00000025944	TRANSLATION	protein_coding	-	CCDS29778.1	1	271	0	1.83	7.5	73.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024986	Hhex	ENSMUST00000237452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044220	Nkx2-3	ENSMUST00000057178	ENSMUSP00000050933	TRANSLATION	protein_coding	-	CCDS29833.1	1	362	0	0.6	3.9	72.4	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000024845	Tmem134	ENSMUST00000171743	ENSMUSP00000159057	TRANSLATION	protein_coding	-	-	5	169	0	0	0	60.4	0	-4,-5	-	-	2.796	MINOR
ENSMUSG00000024845	Tmem134	ENSMUST00000127555	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000153654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000138593	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000148807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000140405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000137579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000139987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000169055	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000130619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024845	Tmem134	ENSMUST00000139718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024845	Tmem134	ENSMUST00000147633	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000151401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000140267	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000135257	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024845	Tmem134	ENSMUST00000150627	ENSMUSP00000158987	TRANSLATION	protein_coding	-	-	5	180	0	0	6.3	113.8	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000099398	Ms4a14	ENSMUST00000187467	ENSMUSP00000140996	TRANSLATION	protein_coding	-	-	5	1232	0	0	0.5	53.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000061132	Blnk	ENSMUST00000054769	ENSMUSP00000057844	TRANSLATION	protein_coding	-	CCDS37983.1	1	457	0	3.5	5.1	41.1	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000061132	Blnk	ENSMUST00000117695	ENSMUSP00000112473	TRANSLATION	protein_coding	-	-	1	454	0	3.5	0.5	41.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000061132	Blnk	ENSMUST00000134568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042372	Dmrt3	ENSMUST00000048935	ENSMUSP00000046812	TRANSLATION	protein_coding	-	CCDS29718.1	1	476	8	1.04	1.5	139.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000042372	Dmrt3	ENSMUST00000237821	ENSMUSP00000157889	TRANSLATION	protein_coding	stop	-	-	23	0	0.24	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050195	Scd4	ENSMUST00000133314	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050195	Scd4	ENSMUST00000058856	ENSMUSP00000059860	TRANSLATION	protein_coding	-	CCDS29849.1	1	353	0	5	1.5	55.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000074746	Pdzd8	ENSMUST00000099274	ENSMUSP00000096880	TRANSLATION	protein_coding	-	CCDS29936.1	1	1147	7	0	0.5	64	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000067242	Lgi1	ENSMUST00000199812	ENSMUSP00000143502	TRANSLATION	protein_coding	-	-	5	533	0	3.87	1.2	302.3	0	-3,-6	-	-	10.876	MINOR
ENSMUSG00000067242	Lgi1	ENSMUST00000197123	ENSMUSP00000142953	TRANSLATION	nonsense_mediated_decay	-	-	5	72	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000067242	Lgi1	ENSMUST00000134832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067242	Lgi1	ENSMUST00000087252	ENSMUSP00000084507	TRANSLATION	nonsense_mediated_decay	-	-	1	72	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000067242	Lgi1	ENSMUST00000198045	ENSMUSP00000143292	TRANSLATION	protein_coding	-	-	5	291	0	4.47	3.6	86.1	0	-3,-6	-	-	6.982	MINOR
ENSMUSG00000067242	Lgi1	ENSMUST00000130039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067242	Lgi1	ENSMUST00000199665	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067242	Lgi1	ENSMUST00000198518	ENSMUSP00000143128	TRANSLATION	protein_coding	-	CCDS29786.1	1	557	0	4.47	6.3	302.3	0	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000067242	Lgi1	ENSMUST00000196090	ENSMUSP00000143538	TRANSLATION	protein_coding	-	-	5	509	0	2.97	2.4	281.1	0	-3,-6	-	-	8.256	MINOR
ENSMUSG00000044724	Gpr152	ENSMUST00000096338	ENSMUSP00000094062	TRANSLATION	protein_coding	-	CCDS29417.1	1	511	0	0.28	0.5	63.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024767	Otub1	ENSMUST00000123594	ENSMUSP00000115195	TRANSLATION	protein_coding	-	-	5	241	0	5.33	1.2	291.6	0	-4,-5	-	-	9.918	MINOR
ENSMUSG00000024767	Otub1	ENSMUST00000025679	ENSMUSP00000025679	TRANSLATION	protein_coding	-	CCDS29520.1	1	271	0	6.41	8.8	291	0	-4,-5	-	-	14.964	PRINCIPAL:1
ENSMUSG00000024767	Otub1	ENSMUST00000123743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024767	Otub1	ENSMUST00000142085	ENSMUSP00000122945	TRANSLATION	protein_coding	stop	-	3	95	0	2.83	0	94.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024767	Otub1	ENSMUST00000127241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024665	Fads2	ENSMUST00000238023	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024665	Fads2	ENSMUST00000235937	ENSMUSP00000158465	TRANSLATION	protein_coding	start/stop	-	-	118	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024665	Fads2	ENSMUST00000025567	ENSMUSP00000025567	TRANSLATION	protein_coding	-	CCDS29571.1	1	444	20	1.4	6.3	189.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000025157	Zdhhc16	ENSMUST00000223768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025157	Zdhhc16	ENSMUST00000224537	ENSMUSP00000152902	TRANSLATION	protein_coding	start/stop	-	-	97	8	0	0	95.9	2	1,-3	-	-	-1	MINOR
ENSMUSG00000025157	Zdhhc16	ENSMUST00000225433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025157	Zdhhc16	ENSMUST00000224562	ENSMUSP00000153627	TRANSLATION	protein_coding	stop	-	-	228	5	0	0	0	6	-2,1	-	-	-1	MINOR
ENSMUSG00000025157	Zdhhc16	ENSMUST00000026154	ENSMUSP00000026154	TRANSLATION	protein_coding	-	CCDS29817.1	1	361	8	0	7.5	117.5	9	-2,1	-	-	15	PRINCIPAL:1
ENSMUSG00000025157	Zdhhc16	ENSMUST00000223624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025157	Zdhhc16	ENSMUST00000223785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025157	Zdhhc16	ENSMUST00000225968	ENSMUSP00000153513	TRANSLATION	nonsense_mediated_decay	start	-	-	167	5	0	0	0	6	-4,0	-	-	-1	MINOR
ENSMUSG00000025157	Zdhhc16	ENSMUST00000223802	ENSMUSP00000152899	TRANSLATION	protein_coding	start	-	-	57	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025157	Zdhhc16	ENSMUST00000224258	ENSMUSP00000153672	TRANSLATION	protein_coding	stop	-	-	101	0	0	0	0	3	-2,0	-	-	-1	MINOR
ENSMUSG00000025157	Zdhhc16	ENSMUST00000224896	ENSMUSP00000153604	TRANSLATION	protein_coding	stop	-	-	77	0	0	0	0	0	-2,1	-	-	-1	MINOR
ENSMUSG00000036908	Unc93b1	ENSMUST00000165711	ENSMUSP00000128751	TRANSLATION	protein_coding	-	CCDS50346.1	5	422	0	0	1.5	25.9	14	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000036908	Unc93b1	ENSMUST00000236920	ENSMUSP00000157793	TRANSLATION	protein_coding	start/stop	-	-	138	0	0	0	0	3	-4,-5	-	-	-1	MINOR
ENSMUSG00000036908	Unc93b1	ENSMUST00000162193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036908	Unc93b1	ENSMUST00000161415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036908	Unc93b1	ENSMUST00000237112	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036908	Unc93b1	ENSMUST00000162708	ENSMUSP00000124272	TRANSLATION	protein_coding	-	CCDS29404.2	1	619	0	0	1.5	25.9	19	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000036908	Unc93b1	ENSMUST00000237030	ENSMUSP00000158499	TRANSLATION	protein_coding	start/stop	-	-	262	0	0	0	0	10	-1,-4	-	-	-1	MINOR
ENSMUSG00000024815	Trpd52l3	ENSMUST00000025727	ENSMUSP00000025727	TRANSLATION	protein_coding	-	CCDS29741.1	-	231	0	0	1.5	207	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041845	Rhod	ENSMUST00000151420	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041845	Rhod	ENSMUST00000235680	ENSMUSP00000157654	TRANSLATION	protein_coding	-	-	-	251	22	4.2	0	150.2	0	-4,-6	-	-	14.484	MINOR
ENSMUSG00000041845	Rhod	ENSMUST00000048197	ENSMUSP00000036031	TRANSLATION	protein_coding	-	CCDS29427.1	1	210	22	5	6.3	182.1	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000041845	Rhod	ENSMUST00000117462	ENSMUSP00000112607	TRANSLATION	protein_coding	-	-	1	200	22	4.5	0.5	150.2	0	-4,-6	-	-	15.084	MINOR
ENSMUSG00000100937	1700020D05Rik	ENSMUST00000189704	ENSMUSP00000140922	TRANSLATION	protein_coding	-	CCDS79675.1	-	294	0	1	0.5	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000023307	Marchf5	ENSMUST00000024078	ENSMUSP00000024078	TRANSLATION	protein_coding	-	CCDS29776.1	1	278	8	0.64	8.8	53.9	6	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000023307	Marchf5	ENSMUST00000148105	-	NO_TRANSLATION	retained_intron
ENSMUSG00000023307	Marchf5	ENSMUST00000128530	ENSMUSP00000118920	TRANSLATION	protein_coding	start	-	3	187	0	0	0	0	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000023307	Marchf5	ENSMUST00000112391	ENSMUSP00000108010	TRANSLATION	protein_coding	-	CCDS50427.1	1	244	8	0.64	0.5	53.9	6	-4,-5	-	-	18	MINOR
ENSMUSG00000096370	Gm21992	ENSMUST00000178404	ENSMUSP00000137562	TRANSLATION	protein_coding,RT	start	-	3	20	0	0.5	0	0	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096370	Gm21992	ENSMUST00000178727	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096370	Gm21992	ENSMUST00000179909	ENSMUSP00000136623	TRANSLATION	protein_coding,RT	-	CCDS79672.1	5	336	0	1.1	0.5	98.2	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096370	Gm21992	ENSMUST00000178353	ENSMUSP00000136599	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	118	0	1.1	3.4	67.5	0	-4,-5	-	-	-1	ALTERNATIVE:2
ENSMUSG00000096370	Gm21992	ENSMUST00000177776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000096370	Gm21992	ENSMUST00000172000	ENSMUSP00000128810	TRANSLATION	protein_coding,RT	-	CCDS79673.1	2	477	0	2.1	0.5	210.7	0	-4,-5	-	-	-1	PRINCIPAL:4
ENSMUSG00000024982	Zdhhc6	ENSMUST00000076891	ENSMUSP00000076157	TRANSLATION	protein_coding	-	CCDS29909.1	1	413	6	0	7.6	180	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024982	Zdhhc6	ENSMUST00000225963	ENSMUSP00000153159	TRANSLATION	nonsense_mediated_decay	-	-	-	410	6	0	0	150.6	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000024982	Zdhhc6	ENSMUST00000225495	ENSMUSP00000152962	TRANSLATION	protein_coding	-	-	-	397	6	0	0	153.5	4	-4,-7	-	-	10.41	MINOR
ENSMUSG00000024982	Zdhhc6	ENSMUST00000224897	ENSMUSP00000153014	TRANSLATION	protein_coding	-	CCDS29909.1	-	413	6	0	7.6	180	4	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024982	Zdhhc6	ENSMUST00000223807	ENSMUSP00000153697	TRANSLATION	nonsense_mediated_decay	-	-	-	144	5	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000024982	Zdhhc6	ENSMUST00000223743	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024982	Zdhhc6	ENSMUST00000225032	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024982	Zdhhc6	ENSMUST00000224474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024982	Zdhhc6	ENSMUST00000226103	ENSMUSP00000153404	TRANSLATION	nonsense_mediated_decay	-	-	-	413	6	0	7.6	180	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000024982	Zdhhc6	ENSMUST00000224291	ENSMUSP00000153221	TRANSLATION	protein_coding	-	-	-	421	6	0	0	154.7	4	-4,-7	-	-	10.482	MINOR
ENSMUSG00000024982	Zdhhc6	ENSMUST00000223625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025231	Sufu	ENSMUST00000039922	ENSMUSP00000049109	TRANSLATION	protein_coding	-	CCDS29879.1	1	484	0	11	6.3	278.7	0	-3,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000025231	Sufu	ENSMUST00000118440	ENSMUSP00000113073	TRANSLATION	protein_coding	-	-	5	467	0	9.5	0	216.1	0	-3,-6	-	-	5.244	MINOR
ENSMUSG00000025231	Sufu	ENSMUST00000144341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025231	Sufu	ENSMUST00000235166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025231	Sufu	ENSMUST00000120778	ENSMUSP00000112653	TRANSLATION	protein_coding	-	-	2	297	0	6.5	0	65.4	0	-3,-6	-	-	0	MINOR
ENSMUSG00000025231	Sufu	ENSMUST00000123252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025231	Sufu	ENSMUST00000111867	ENSMUSP00000107498	TRANSLATION	protein_coding	-	CCDS38008.1	1	485	0	11	6.3	278.7	0	-3,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000033207	Mamdc2	ENSMUST00000236349	ENSMUSP00000157505	TRANSLATION	nonsense_mediated_decay	-	-	-	217	0	0.93	0	101.4	0	4,-1	-	-	-1	MINOR
ENSMUSG00000033207	Mamdc2	ENSMUST00000036069	ENSMUSP00000045432	TRANSLATION	protein_coding	-	CCDS29707.1	1	686	0	2.81	5.3	452.4	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000054523	Ms4a5	ENSMUST00000186937	ENSMUSP00000139805	TRANSLATION	protein_coding	-	-	1	154	0	0	0	59.7	2	-4,-6	-	-	2.868	MINOR
ENSMUSG00000054523	Ms4a5	ENSMUST00000188335	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054523	Ms4a5	ENSMUST00000188267	ENSMUSP00000139493	TRANSLATION	nonsense_mediated_decay	-	-	5	100	0	0	0	40.4	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000054523	Ms4a5	ENSMUST00000191110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000054523	Ms4a5	ENSMUST00000067673	ENSMUSP00000066960	TRANSLATION	protein_coding	-	CCDS29596.1	1	197	0	0	3.9	111.9	4	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000071657	Bscl2	ENSMUST00000159770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071657	Bscl2	ENSMUST00000160897	ENSMUSP00000125250	TRANSLATION	nonsense_mediated_decay	-	-	5	213	0	0	0	96.5	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000071657	Bscl2	ENSMUST00000086058	ENSMUSP00000083224	TRANSLATION	protein_coding	-	CCDS70931.1	1	383	0	0	0.5	202.7	5	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000071657	Bscl2	ENSMUST00000159571	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071657	Bscl2	ENSMUST00000160556	ENSMUSP00000123976	TRANSLATION	protein_coding	-	CCDS70931.1	1	383	0	0	0.5	202.7	5	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000071657	Bscl2	ENSMUST00000159634	ENSMUSP00000125422	TRANSLATION	protein_coding	-	CCDS70931.1	1	383	0	0	0.5	202.7	5	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000071657	Bscl2	ENSMUST00000162580	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071657	Bscl2	ENSMUST00000162071	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071657	Bscl2	ENSMUST00000171649	ENSMUSP00000127685	TRANSLATION	protein_coding	-	CCDS29551.2	1	443	0	0	0.5	202.7	5	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000071657	Bscl2	ENSMUST00000159653	ENSMUSP00000123920	TRANSLATION	nonsense_mediated_decay	start	-	3	134	0	0	0	90.6	3	1,-3	-	-	-1	MINOR
ENSMUSG00000024810	Il33	ENSMUST00000136850	ENSMUSP00000135324	TRANSLATION	protein_coding	stop	-	2	83	0	0	0	83.2	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000024810	Il33	ENSMUST00000177518	ENSMUSP00000135854	TRANSLATION	protein_coding	stop	-	3	228	0	2.964	0	328.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024810	Il33	ENSMUST00000025724	ENSMUSP00000025724	TRANSLATION	protein_coding	-	CCDS29740.1	1	266	0	3.914	1.5	419.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024810	Il33	ENSMUST00000120388	ENSMUSP00000113829	TRANSLATION	protein_coding	-	CCDS29740.1	1	266	0	3.914	1.5	419.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000024810	Il33	ENSMUST00000144528	ENSMUSP00000122319	TRANSLATION	protein_coding	stop	-	3	66	0	0	0	102.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000056185	Snx32	ENSMUST00000238132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056185	Snx32	ENSMUST00000237111	ENSMUSP00000157473	TRANSLATION	protein_coding	-	-	-	451	0	6.84	0.5	125.4	0	-4,-5	-	-	11.982	ALTERNATIVE:2
ENSMUSG00000056185	Snx32	ENSMUST00000237945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056185	Snx32	ENSMUST00000070172	ENSMUSP00000070915	TRANSLATION	protein_coding	-	CCDS29468.1	1	404	0	6.84	4.1	125.7	0	-4,-5	-	-	13	PRINCIPAL:2
ENSMUSG00000056185	Snx32	ENSMUST00000237249	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056185	Snx32	ENSMUST00000236120	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056185	Snx32	ENSMUST00000237924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024743	Syt7	ENSMUST00000235479	ENSMUSP00000157682	TRANSLATION	protein_coding	-	-	-	479	24	5	6	181.6	4	-4,-7	-	-	19.428	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000073899	ENSMUSP00000073560	TRANSLATION	protein_coding	-	CCDS29575.1	1	403	24	5	11.5	181.6	4	-4,-7	-	-	21	PRINCIPAL:3
ENSMUSG00000024743	Syt7	ENSMUST00000224135	ENSMUSP00000153132	TRANSLATION	protein_coding	-	CCDS50388.1	-	567	24	5	7.3	181.6	4	-4,-7	-	-	19.8	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000235784	ENSMUSP00000158359	TRANSLATION	protein_coding	-	-	-	643	24	5	4.6	181.6	4	-4,-7	-	-	19.029	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000076968	ENSMUSP00000076234	TRANSLATION	protein_coding	-	-	1	611	24	5	5.1	181.6	4	-4,-7	-	-	19.17	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000169121	ENSMUSP00000127973	TRANSLATION	protein_coding	-	-	5	687	24	5	5.1	181.6	4	-4,-7	-	-	19.17	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000225861	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024743	Syt7	ENSMUST00000235303	ENSMUSP00000158202	TRANSLATION	nonsense_mediated_decay	-	-	-	122	3	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000237745	ENSMUSP00000157394	TRANSLATION	nonsense_mediated_decay	-	-	-	122	3	0	0	0	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000225019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024743	Syt7	ENSMUST00000225452	ENSMUSP00000153110	TRANSLATION	protein_coding	-	-	-	523	24	5	3.6	181.6	4	-4,-7	-	-	18.744	MINOR
ENSMUSG00000024743	Syt7	ENSMUST00000223586	ENSMUSP00000153482	TRANSLATION	protein_coding	-	CCDS29576.1	-	447	24	5	10.5	181.6	4	-4,-7	-	-	20.715	ALTERNATIVE:1
ENSMUSG00000024743	Syt7	ENSMUST00000235717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024743	Syt7	ENSMUST00000235568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024743	Syt7	ENSMUST00000237366	ENSMUSP00000157495	TRANSLATION	protein_coding	-	-	-	520	24	5	0	181.6	4	-4,-7	-	-	18	MINOR
ENSMUSG00000053536	Cstf2t	ENSMUST00000066039	ENSMUSP00000093831	TRANSLATION	protein_coding	-	CCDS37958.1	-	632	0	0.4	0.5	253	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024730	Ms4a8a	ENSMUST00000187859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024730	Ms4a8a	ENSMUST00000025636	ENSMUSP00000025636	TRANSLATION	protein_coding	-	CCDS37921.1	1	290	0	0	0.5	69.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025085	Ablim1	ENSMUST00000111555	ENSMUSP00000107180	TRANSLATION	protein_coding	-	-	5	777	31	8	0	703.1	0	-4,-7	-	-	17.892	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111528	ENSMUSP00000107153	TRANSLATION	protein_coding	-	-	5	454	2	2.9	2.4	277.9	0	-4,-5	-	-	0.528	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000150425	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025085	Ablim1	ENSMUST00000127198	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025085	Ablim1	ENSMUST00000133369	ENSMUSP00000117798	TRANSLATION	protein_coding	start/stop	-	3	292	25	4.6	0	141.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000079360	ENSMUSP00000078336	TRANSLATION	protein_coding	-	CCDS38027.1	5	861	31	8	0.5	699.5	0	-4,-7	-	-	17.676	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111558	ENSMUSP00000107183	TRANSLATION	protein_coding	-	-	5	744	31	8	0.5	704.9	0	-4,-5	-	-	18	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000128212	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025085	Ablim1	ENSMUST00000156316	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025085	Ablim1	ENSMUST00000111550	ENSMUSP00000107175	TRANSLATION	protein_coding	-	-	5	682	31	8	1.2	646.6	0	-4,-5	-	-	14.578	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000134430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025085	Ablim1	ENSMUST00000104902	ENSMUSP00000127818	TRANSLATION	protein_coding	-	CCDS50478.1	5	545	2	2.9	0.5	528	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000137389	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025085	Ablim1	ENSMUST00000111544	ENSMUSP00000107169	TRANSLATION	protein_coding	-	CCDS70963.1	5	668	31	8	4.1	452.7	0	-4,-5	-	-	13.17	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111529	ENSMUSP00000107154	TRANSLATION	protein_coding	-	CCDS84456.1	5	426	2	2.9	6.3	277.9	0	-4,-5	-	-	2	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000133782	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025085	Ablim1	ENSMUST00000111559	ENSMUSP00000107184	TRANSLATION	protein_coding	-	-	5	714	31	8	0.5	703.1	0	-4,-5	-	-	17.892	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111546	ENSMUSP00000107172	TRANSLATION	protein_coding	-	CCDS50479.1	5	701	31	8	2.9	703.1	0	-4,-5	-	-	18.608	PRINCIPAL:1
ENSMUSG00000025085	Ablim1	ENSMUST00000099294	ENSMUSP00000096897	TRANSLATION	protein_coding	-	CCDS70964.1	5	654	31	8	5.3	646.6	0	-4,-5	-	-	16.124	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111526	ENSMUSP00000107151	TRANSLATION	protein_coding	-	-	5	400	2	2.9	2.4	277.1	0	-4,-5	-	-	0.528	MINOR
ENSMUSG00000025085	Ablim1	ENSMUST00000111524	ENSMUSP00000107149	TRANSLATION	protein_coding	-	-	1	268	25	4.6	0	141.8	0	-4,-6	-	-	1.998	MINOR
ENSMUSG00000024650	Slc22a6	ENSMUST00000010250	ENSMUSP00000010250	TRANSLATION	protein_coding	-	CCDS29538.1	1	545	0	3.78	0.5	107.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071528	Atp5md	ENSMUST00000236170	ENSMUSP00000158514	TRANSLATION	protein_coding	-	CCDS38014.1	-	58	0	0	17	100.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000071528	Atp5md	ENSMUST00000237720	ENSMUSP00000157712	TRANSLATION	nonsense_mediated_decay	-	-	-	58	0	0	17	100.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071528	Atp5md	ENSMUST00000096014	ENSMUSP00000093713	TRANSLATION	protein_coding	-	CCDS38014.1	1	58	0	0	17	100.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000071528	Atp5md	ENSMUST00000235771	ENSMUSP00000158561	TRANSLATION	protein_coding	-	CCDS38014.1	-	58	0	0	17	100.5	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000025215	Tlx1	ENSMUST00000026236	ENSMUSP00000026236	TRANSLATION	protein_coding	-	CCDS29858.1	1	333	0	2.1	7.5	72.1	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025215	Tlx1	ENSMUST00000174617	ENSMUSP00000133627	TRANSLATION	protein_coding	-	-	5	91	0	1.1	0	27.5	0	-4,-7	-	-	5.43	MINOR
ENSMUSG00000048356	Olfr1496	ENSMUST00000209137	ENSMUSP00000146523	TRANSLATION	protein_coding	-	-	5	315	0	0.42	2.7	191.5	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000048356	Olfr1496	ENSMUST00000057390	ENSMUSP00000054924	TRANSLATION	protein_coding	-	-	-	315	0	0.42	2.7	191.5	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000048356	Olfr1496	ENSMUST00000219412	ENSMUSP00000151386	TRANSLATION	protein_coding	-	CCDS29672.1	-	317	0	0.42	2.7	191.5	6	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000038155	Gstp2	ENSMUST00000235657	ENSMUSP00000158235	TRANSLATION	protein_coding	stop	-	-	95	6	3.08	0	26	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038155	Gstp2	ENSMUST00000237999	ENSMUSP00000158168	TRANSLATION	protein_coding	stop	-	-	84	6	2.75	0	26	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000038155	Gstp2	ENSMUST00000042700	ENSMUSP00000038931	TRANSLATION	protein_coding	-	CCDS29412.1	1	210	9	5.58	7.5	90.3	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000038155	Gstp2	ENSMUST00000237650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038155	Gstp2	ENSMUST00000237565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038155	Gstp2	ENSMUST00000235381	ENSMUSP00000158159	TRANSLATION	protein_coding	stop	-	-	132	5	3.38	0	23	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000063590	Slc22a28	ENSMUST00000065651	ENSMUSP00000067114	TRANSLATION	protein_coding	-	CCDS29534.1	1	552	0	3.04	0.5	88	0	-3,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075044	Slc22a29	ENSMUST00000142517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075044	Slc22a29	ENSMUST00000149182	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000075044	Slc22a29	ENSMUST00000113298	ENSMUSP00000108923	TRANSLATION	protein_coding	-	CCDS29535.1	1	551	0	3.28	1.5	84	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000075044	Slc22a29	ENSMUST00000140910	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032808	Cyp2c38	ENSMUST00000035488	ENSMUSP00000044722	TRANSLATION	protein_coding	-	CCDS29794.1	1	490	35	9	2.7	534	0	-1,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000236332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056917	Sipa1	ENSMUST00000236827	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056917	Sipa1	ENSMUST00000164304	ENSMUSP00000128208	TRANSLATION	protein_coding	-	CCDS29474.1	1	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000236006	ENSMUSP00000158378	TRANSLATION	protein_coding	-	CCDS29474.1	-	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000237874	ENSMUSP00000157692	TRANSLATION	protein_coding	-	CCDS29474.1	-	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000169854	ENSMUSP00000132345	TRANSLATION	protein_coding	-	CCDS29474.1	5	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000238092	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056917	Sipa1	ENSMUST00000236464	ENSMUSP00000158193	TRANSLATION	protein_coding	-	-	-	693	0	3	0	242.9	0	-4,-7	-	-	8.82	MINOR
ENSMUSG00000056917	Sipa1	ENSMUST00000236486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056917	Sipa1	ENSMUST00000237544	ENSMUSP00000158151	TRANSLATION	protein_coding	stop	-	-	34	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000056917	Sipa1	ENSMUST00000080824	ENSMUSP00000079637	TRANSLATION	protein_coding	-	CCDS29474.1	1	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000071857	ENSMUSP00000073618	TRANSLATION	protein_coding	-	CCDS29474.1	1	1038	0	4.59	0.5	242.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000056917	Sipa1	ENSMUST00000238020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040565	Btaf1	ENSMUST00000238041	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040565	Btaf1	ENSMUST00000236343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040565	Btaf1	ENSMUST00000099494	ENSMUSP00000097093	TRANSLATION	protein_coding	-	CCDS37969.1	1	1848	5	10.05	8.8	694.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000024766	Lipo3	ENSMUST00000112508	ENSMUSP00000108127	TRANSLATION	protein_coding	-	CCDS37961.1	1	399	6	7.3	1.5	74.9	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024766	Lipo3	ENSMUST00000025694	ENSMUSP00000025694	TRANSLATION	protein_coding	-	CCDS37961.1	1	399	6	7.3	1.5	74.9	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000024766	Lipo3	ENSMUST00000145807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024766	Lipo3	ENSMUST00000235583	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079344	Lipo4	ENSMUST00000143522	ENSMUSP00000121321	TRANSLATION	protein_coding	-	-	5	398	6	7.3	0.5	101.3	0	1,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000025086	Trub1	ENSMUST00000238107	ENSMUSP00000157924	TRANSLATION	protein_coding	start/stop	-	-	141	1	1.85	0	48.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025086	Trub1	ENSMUST00000026072	ENSMUSP00000026072	TRANSLATION	protein_coding	-	CCDS29927.1	1	247	2	3.38	0.5	159.5	0	-4,-6	-	-	11.366	MINOR
ENSMUSG00000025086	Trub1	ENSMUST00000237166	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025086	Trub1	ENSMUST00000026073	ENSMUSP00000026073	TRANSLATION	protein_coding	-	CCDS29926.1	1	338	2	4.3	1.5	172.7	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000067528	Olfr1424	ENSMUST00000207681	ENSMUSP00000146552	TRANSLATION	protein_coding	-	CCDS29619.1	5	313	0	0.42	2.7	160.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067528	Olfr1424	ENSMUST00000087830	ENSMUSP00000085132	TRANSLATION	protein_coding	-	CCDS29619.1	-	313	0	0.42	2.7	160.1	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025047	Pdcd11	ENSMUST00000236656	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025047	Pdcd11	ENSMUST00000072141	ENSMUSP00000072008	TRANSLATION	protein_coding	-	CCDS29888.1	1	1862	0	9.82	0.5	181.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025047	Pdcd11	ENSMUST00000235871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047423	AI837181	ENSMUST00000054477	ENSMUSP00000158508	TRANSLATION	protein_coding	-	-	1	181	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000047423	AI837181	ENSMUST00000159759	ENSMUSP00000125651	TRANSLATION	protein_coding	-	CCDS29463.2	1	298	0	2	0.5	0	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000074882	Cyp2c68	ENSMUST00000099472	ENSMUSP00000097071	TRANSLATION	protein_coding	-	CCDS29797.1	1	491	31	8.8	1.5	501.4	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000062432	Cyp26c1	ENSMUST00000073391	ENSMUSP00000073105	TRANSLATION	protein_coding	-	CCDS50428.1	1	518	27	3.68	1.5	176.7	0	0,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000006464	Bbs1	ENSMUST00000238170	ENSMUSP00000157830	TRANSLATION	protein_coding	-	-	-	452	3	4.73	0	282.9	0	-4,-5	-	-	6.588	MINOR
ENSMUSG00000006464	Bbs1	ENSMUST00000053506	ENSMUSP00000055321	TRANSLATION	protein_coding	-	CCDS29442.1	1	593	3	7.33	2.7	336.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000006464	Bbs1	ENSMUST00000235498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006464	Bbs1	ENSMUST00000236150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006464	Bbs1	ENSMUST00000236538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006464	Bbs1	ENSMUST00000237638	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006464	Bbs1	ENSMUST00000237085	ENSMUSP00000157393	TRANSLATION	protein_coding	-	-	-	496	3	5.72	0	159.7	0	-4,-5	-	-	5.778	MINOR
ENSMUSG00000006464	Bbs1	ENSMUST00000237362	ENSMUSP00000157728	TRANSLATION	nonsense_mediated_decay	-	-	-	164	3	1.97	0	165.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000159210	ENSMUSP00000124763	TRANSLATION	protein_coding	start	-	3	95	6	1.75	0	26.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000162661	ENSMUSP00000124821	TRANSLATION	protein_coding	stop	-	5	172	11	4.52	0	79.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000086993	ENSMUSP00000084215	TRANSLATION	protein_coding	-	CCDS70955.1	1	225	18	6.05	7.1	114.7	0	-4,0	-	-	18.327	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000161886	ENSMUSP00000124482	TRANSLATION	protein_coding	-	CCDS29868.1	1	220	18	6.02	11.6	114.7	0	-4,-5	-	-	19.542	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000079431	ENSMUSP00000078400	TRANSLATION	protein_coding	-	CCDS50453.1	1	252	18	6.3	10.4	114.7	0	-4,-5	-	-	19.761	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000159245	ENSMUSP00000124346	TRANSLATION	protein_coding	start	-	5	172	12	3.34	0	86.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000239049	ENSMUSP00000158890	TRANSLATION	protein_coding	-	-	-	230	18	6.75	11.6	114.7	0	-1,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025221	Kcnip2	ENSMUST00000159446	ENSMUSP00000125499	TRANSLATION	protein_coding	start/stop	-	3	125	0	1.99	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000026247	ENSMUSP00000026247	TRANSLATION	protein_coding	-	-	5	252	18	6.34	10.4	114.7	0	-4,-5	-	-	19.839	MINOR
ENSMUSG00000025221	Kcnip2	ENSMUST00000111906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025221	Kcnip2	ENSMUST00000162528	ENSMUSP00000125142	TRANSLATION	protein_coding	-	CCDS38004.1	1	270	18	6.54	7.5	114.7	0	-4,-5	-	-	19.419	MINOR
ENSMUSG00000037126	Psd	ENSMUST00000225781	ENSMUSP00000153112	TRANSLATION	protein_coding	stop	-	-	65	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037126	Psd	ENSMUST00000223903	ENSMUSP00000153608	TRANSLATION	protein_coding	stop	-	-	25	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037126	Psd	ENSMUST00000226062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037126	Psd	ENSMUST00000225323	ENSMUSP00000152942	TRANSLATION	protein_coding	-	CCDS84449.1	-	1025	5	5.76	1.5	252.7	0	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000037126	Psd	ENSMUST00000041391	ENSMUSP00000039728	TRANSLATION	protein_coding	-	CCDS29875.1	1	1024	5	5.76	1.5	252.7	0	-4,-7	-	-	17	PRINCIPAL:3
ENSMUSG00000037126	Psd	ENSMUST00000224094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037126	Psd	ENSMUST00000225770	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037126	Psd	ENSMUST00000224444	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037126	Psd	ENSMUST00000225072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037126	Psd	ENSMUST00000096029	ENSMUSP00000093729	TRANSLATION	protein_coding	-	CCDS84449.1	5	1025	5	5.76	1.5	252.7	0	-4,-7	-	-	17	ALTERNATIVE:2
ENSMUSG00000037126	Psd	ENSMUST00000224556	ENSMUSP00000153381	TRANSLATION	protein_coding	-	-	-	393	5	2.46	0.5	124.3	0	-4,0	-	-	5	MINOR
ENSMUSG00000037126	Psd	ENSMUST00000223917	ENSMUSP00000153375	TRANSLATION	protein_coding	stop	-	-	14	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037126	Psd	ENSMUST00000225748	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037126	Psd	ENSMUST00000224447	ENSMUSP00000153377	TRANSLATION	protein_coding	stop	-	-	105	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024944	Arl2	ENSMUST00000123193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024944	Arl2	ENSMUST00000236138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024944	Arl2	ENSMUST00000025893	ENSMUSP00000025893	TRANSLATION	protein_coding	-	CCDS29496.1	1	184	19	4.5	14.3	243.4	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000024944	Arl2	ENSMUST00000235200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024944	Arl2	ENSMUST00000134821	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061387	Olfr1490	ENSMUST00000080162	ENSMUSP00000079057	TRANSLATION	protein_coding	-	CCDS29668.1	-	316	0	0.32	1.5	162.3	7	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000061387	Olfr1490	ENSMUST00000216631	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061387	Olfr1490	ENSMUST00000213900	ENSMUSP00000151186	TRANSLATION	protein_coding	-	-	5	321	0	0.32	0	162.3	7	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000024777	Ppp2r5b	ENSMUST00000153155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024777	Ppp2r5b	ENSMUST00000236699	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024777	Ppp2r5b	ENSMUST00000148693	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024777	Ppp2r5b	ENSMUST00000025695	ENSMUSP00000025695	TRANSLATION	protein_coding	-	CCDS29499.1	1	497	0	9.85	7.5	618.9	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024927	Rela	ENSMUST00000025867	ENSMUSP00000025867	TRANSLATION	protein_coding	-	CCDS29473.1	1	549	0	8.396	1.5	360.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024927	Rela	ENSMUST00000237361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024927	Rela	ENSMUST00000238126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024927	Rela	ENSMUST00000236300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024927	Rela	ENSMUST00000237838	ENSMUSP00000158430	TRANSLATION	nonsense_mediated_decay	-	-	-	121	0	2.132	0	148.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024927	Rela	ENSMUST00000237863	ENSMUSP00000157385	TRANSLATION	protein_coding	stop	-	-	67	0	1.066	0	70.6	0	-1,-4	-	-	-1	MINOR
ENSMUSG00000024927	Rela	ENSMUST00000238000	ENSMUSP00000157934	TRANSLATION	nonsense_mediated_decay	-	-	-	348	0	7.596	0	360.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024835	Coro1b	ENSMUST00000134194	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024835	Coro1b	ENSMUST00000008893	ENSMUSP00000008893	TRANSLATION	protein_coding	-	CCDS29418.1	1	484	0	9.38	1.5	245.8	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000024835	Coro1b	ENSMUST00000148189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000123874	ENSMUSP00000118450	TRANSLATION	protein_coding	stop	-	2	173	0	3.75	0	159.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024835	Coro1b	ENSMUST00000237578	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000140419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000237125	ENSMUSP00000157859	TRANSLATION	protein_coding	stop	-	-	251	0	6.08	0	175.1	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024835	Coro1b	ENSMUST00000236397	ENSMUSP00000158099	TRANSLATION	nonsense_mediated_decay	-	-	-	138	0	2	0	117.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024835	Coro1b	ENSMUST00000148733	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000235477	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000143613	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000142878	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000135498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024835	Coro1b	ENSMUST00000236023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118125	Gm50387	ENSMUST00000160852	ENSMUSP00000125570	TRANSLATION	nonsense_mediated_decay,RT	-	-	2	199	4	0	6.3	59.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000025178	Pi4k2a	ENSMUST00000235932	ENSMUSP00000158574	TRANSLATION	protein_coding	-	CCDS29821.1	-	479	0	8.1	6.3	224.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025178	Pi4k2a	ENSMUST00000238085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025178	Pi4k2a	ENSMUST00000066778	ENSMUSP00000069284	TRANSLATION	protein_coding	-	CCDS29821.1	1	479	0	8.1	6.3	224.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000025178	Pi4k2a	ENSMUST00000235988	ENSMUSP00000158577	TRANSLATION	nonsense_mediated_decay	-	-	-	386	0	5.35	0	179.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025219	Fgf8	ENSMUST00000026240	ENSMUSP00000026240	TRANSLATION	protein_coding	-	CCDS50452.1	1	244	7	3.66	5.1	143.4	0	4,-1	-	-	20	PRINCIPAL:4
ENSMUSG00000025219	Fgf8	ENSMUST00000111927	ENSMUSP00000107558	TRANSLATION	protein_coding	-	CCDS50450.1	1	204	7	3.33	3.9	143.4	0	4,-1	-	-	18.754	MINOR
ENSMUSG00000025219	Fgf8	ENSMUST00000111924	ENSMUSP00000107555	TRANSLATION	protein_coding	-	-	5	140	6	2.33	2.9	113.8	0	-4,-5	-	-	13.634	MINOR
ENSMUSG00000025219	Fgf8	ENSMUST00000111925	ENSMUSP00000107556	TRANSLATION	protein_coding	-	-	5	233	7	3.33	2.9	143.4	0	4,-1	-	-	18.266	MINOR
ENSMUSG00000025219	Fgf8	ENSMUST00000111928	ENSMUSP00000107559	TRANSLATION	protein_coding	-	CCDS50451.1	1	215	7	3.66	2.9	143.4	0	3,-2	-	-	18.926	ALTERNATIVE:2
ENSMUSG00000025219	Fgf8	ENSMUST00000026241	ENSMUSP00000026241	TRANSLATION	protein_coding	-	CCDS29864.1	1	268	7	3.33	1.5	143.4	0	2,-3	-	-	17.584	MINOR
ENSMUSG00000049164	Zfp518a	ENSMUST00000050092	ENSMUSP00000055956	TRANSLATION	protein_coding	-	CCDS37982.1	2	1478	20	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049164	Zfp518a	ENSMUST00000235235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049164	Zfp518a	ENSMUST00000235207	ENSMUSP00000158039	TRANSLATION	protein_coding	-	CCDS37982.1	-	1478	20	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071633	Gm4952	ENSMUST00000181868	ENSMUSP00000137934	TRANSLATION	protein_coding	stop	-	5	216	0	0	0	293.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071633	Gm4952	ENSMUST00000092931	ENSMUSP00000090607	TRANSLATION	protein_coding	-	CCDS50398.1	1	296	8	0	1.5	438.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047379	B4gat1	ENSMUST00000053705	ENSMUSP00000062016	TRANSLATION	protein_coding	-	CCDS29446.1	1	415	0	0	7.5	344.3	0	1,-3	-	-	9	PRINCIPAL:1
ENSMUSG00000047379	B4gat1	ENSMUST00000235776	ENSMUSP00000157645	TRANSLATION	protein_coding	-	-	-	379	0	0	0	262.6	0	1,-3	-	-	1.098	MINOR
ENSMUSG00000024926	Kat5	ENSMUST00000113641	ENSMUSP00000109271	TRANSLATION	protein_coding	-	CCDS29472.1	1	513	28	9.85	9.5	351.6	0	-4,-5	-	-	21	PRINCIPAL:2
ENSMUSG00000024926	Kat5	ENSMUST00000236062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024926	Kat5	ENSMUST00000236229	ENSMUSP00000158391	TRANSLATION	protein_coding	-	-	-	461	28	9.85	6.5	351.6	0	-4,-5	-	-	19.941	ALTERNATIVE:1
ENSMUSG00000024926	Kat5	ENSMUST00000236964	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024926	Kat5	ENSMUST00000236883	ENSMUSP00000157766	TRANSLATION	nonsense_mediated_decay	-	-	-	492	25	6.97	0	251.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024926	Kat5	ENSMUST00000236264	ENSMUSP00000157904	TRANSLATION	protein_coding	stop	-	-	114	0	2.5	0	69.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024926	Kat5	ENSMUST00000236259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024926	Kat5	ENSMUST00000236729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024926	Kat5	ENSMUST00000235788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024926	Kat5	ENSMUST00000235796	ENSMUSP00000157995	TRANSLATION	protein_coding	start/stop	-	-	157	7	3	0	97.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024926	Kat5	ENSMUST00000237072	ENSMUSP00000157522	TRANSLATION	protein_coding	start	-	-	90	9	1.93	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024926	Kat5	ENSMUST00000235701	ENSMUSP00000158181	TRANSLATION	protein_coding	-	-	-	494	28	9.85	6.5	351.6	0	-4,-6	-	-	19.941	ALTERNATIVE:1
ENSMUSG00000025199	Chuk	ENSMUST00000123806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025199	Chuk	ENSMUST00000119591	ENSMUSP00000113809	TRANSLATION	protein_coding	-	CCDS50444.1	1	719	0	16.75	5.1	182.9	0	-4,-6	-	-	10.026	MINOR
ENSMUSG00000025199	Chuk	ENSMUST00000149091	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025199	Chuk	ENSMUST00000026217	ENSMUSP00000026217	TRANSLATION	protein_coding	-	CCDS29843.1	1	745	0	16.75	6.3	241.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000025199	Chuk	ENSMUST00000144286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025199	Chuk	ENSMUST00000134495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025199	Chuk	ENSMUST00000147423	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025199	Chuk	ENSMUST00000146861	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044948	Cfap43	ENSMUST00000159999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044948	Cfap43	ENSMUST00000162657	ENSMUSP00000158062	TRANSLATION	nonsense_mediated_decay	-	-	5	402	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000044948	Cfap43	ENSMUST00000160247	ENSMUSP00000125007	TRANSLATION	protein_coding	-	CCDS57146.1	5	1682	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000044948	Cfap43	ENSMUST00000161832	ENSMUSP00000158379	TRANSLATION	protein_coding	-	-	1	562	0	0	0	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000044948	Cfap43	ENSMUST00000159204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044948	Cfap43	ENSMUST00000160970	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044948	Cfap43	ENSMUST00000026048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072437	Nanos1	ENSMUST00000088237	ENSMUSP00000096874	TRANSLATION	protein_coding	-	CCDS29941.1	-	267	8	0.2	0.5	89	0	-2,2	-	-	18	PRINCIPAL:1
ENSMUSG00000025013	Tll2	ENSMUST00000169941	ENSMUSP00000125973	TRANSLATION	protein_coding	-	-	1	995	32	13.635	0	869.1	0	3,-2	-	-	13.824	MINOR
ENSMUSG00000025013	Tll2	ENSMUST00000025986	ENSMUSP00000025986	TRANSLATION	protein_coding	-	CCDS37986.1	1	1012	32	14.5	0.5	909.9	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000053279	Aldh1a1	ENSMUST00000225249	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053279	Aldh1a1	ENSMUST00000224358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053279	Aldh1a1	ENSMUST00000225313	ENSMUSP00000153011	TRANSLATION	protein_coding	stop	-	-	138	0	3.75	0	90.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000053279	Aldh1a1	ENSMUST00000225337	ENSMUSP00000153410	TRANSLATION	protein_coding	-	CCDS29695.1	-	501	26	12.33	9.7	609.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000053279	Aldh1a1	ENSMUST00000224807	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053279	Aldh1a1	ENSMUST00000087638	ENSMUSP00000084918	TRANSLATION	protein_coding	-	CCDS29695.1	1	501	26	12.33	9.7	609.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024747	Aldh1a7	ENSMUST00000025656	ENSMUSP00000025656	TRANSLATION	protein_coding	-	CCDS29696.1	1	501	26	12	6.3	610.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000006457	Actn3	ENSMUST00000006626	ENSMUSP00000006626	TRANSLATION	protein_coding	-	CCDS29441.1	1	900	4	19.5	3.9	518.6	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000006457	Actn3	ENSMUST00000138811	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033768	Nrxn2	ENSMUST00000128272	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033768	Nrxn2	ENSMUST00000113459	ENSMUSP00000109086	TRANSLATION	protein_coding	-	-	2	353	4	3.6	0	84.3	0	0,-2	-	-	0	MINOR
ENSMUSG00000033768	Nrxn2	ENSMUST00000113461	ENSMUSP00000109088	TRANSLATION	protein_coding	-	-	5	1640	19	15.263	2.4	554	2	3,-1	-	-	15.495	MINOR
ENSMUSG00000033768	Nrxn2	ENSMUST00000137166	ENSMUSP00000119762	TRANSLATION	protein_coding	-	-	5	1710	19	16.428	3.4	538.8	2	3,-1	-	-	17.256	MINOR
ENSMUSG00000033768	Nrxn2	ENSMUST00000154580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000235714	ENSMUSP00000158360	TRANSLATION	protein_coding	-	CCDS57133.1	-	1503	19	16.758	3.9	549.9	2	3,-1	-	-	18.754	ALTERNATIVE:2
ENSMUSG00000033768	Nrxn2	ENSMUST00000137821	ENSMUSP00000122920	TRANSLATION	protein_coding	start/stop	-	3	216	4	3.064	0	79.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033768	Nrxn2	ENSMUST00000157014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000124815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000113458	ENSMUSP00000109085	TRANSLATION	protein_coding	-	-	5	660	4	4.6	2.2	110.2	2	0,-2	-	-	0.414	MINOR
ENSMUSG00000033768	Nrxn2	ENSMUST00000150792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033768	Nrxn2	ENSMUST00000236610	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000155158	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000236635	ENSMUSP00000157405	TRANSLATION	protein_coding	-	-	-	1511	19	16.593	3.9	541.6	2	3,-1	-	-	17.926	ALTERNATIVE:2
ENSMUSG00000033768	Nrxn2	ENSMUST00000148391	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033768	Nrxn2	ENSMUST00000140435	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033768	Nrxn2	ENSMUST00000113462	ENSMUSP00000109089	TRANSLATION	protein_coding	-	CCDS57132.1	1	1703	19	16.593	3.9	541.6	2	3,-1	-	-	17.926	PRINCIPAL:3
ENSMUSG00000033768	Nrxn2	ENSMUST00000077182	ENSMUSP00000076424	TRANSLATION	protein_coding	-	CCDS57133.1	5	1503	19	16.758	3.9	549.9	2	3,-1	-	-	18.754	ALTERNATIVE:2
ENSMUSG00000095098	Ccdc85b	ENSMUST00000179549	ENSMUSP00000137537	TRANSLATION	protein_coding	-	CCDS50357.1	-	202	0	0	7.5	263.6	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000095098	Ccdc85b	ENSMUST00000236881	ENSMUSP00000157571	TRANSLATION	protein_coding	-	-	-	85	0	0	1.5	0	0	-4,-5	-	-	0.231	MINOR
ENSMUSG00000061742	Slc22a12	ENSMUST00000126142	ENSMUSP00000114626	TRANSLATION	protein_coding	start/stop	-	5	274	0	1.56	0	0	3	0,-3	-	-	-1	MINOR
ENSMUSG00000061742	Slc22a12	ENSMUST00000129698	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061742	Slc22a12	ENSMUST00000113451	ENSMUSP00000109078	TRANSLATION	protein_coding	-	CCDS29505.1	1	553	0	4.81	1.5	82.8	12	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035735	Dagla	ENSMUST00000156361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035735	Dagla	ENSMUST00000039327	ENSMUSP00000046358	TRANSLATION	protein_coding	-	CCDS29574.1	5	1044	0	1.625	3.9	38.7	3	-3,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000035735	Dagla	ENSMUST00000125567	ENSMUSP00000138702	TRANSLATION	nonsense_mediated_decay	-	-	1	99	0	0	0	0	2	-3,-5	-	-	-1	MINOR
ENSMUSG00000074913	Gm815	ENSMUST00000099536	ENSMUSP00000097134	TRANSLATION	protein_coding	-	CCDS50410.1	1	115	2	0	0.5	0	0	-2,-4	-	-	2	PRINCIPAL:2
ENSMUSG00000074913	Gm815	ENSMUST00000235850	ENSMUSP00000158031	TRANSLATION	protein_coding	-	-	-	83	2	0	0	0	0	-4,-2	-	-	2	ALTERNATIVE:2
ENSMUSG00000057817	Olfr1446	ENSMUST00000216805	ENSMUSP00000149198	TRANSLATION	protein_coding	-	CCDS29642.1	3	308	0	0.6	1.5	173.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057817	Olfr1446	ENSMUST00000081236	ENSMUSP00000079994	TRANSLATION	protein_coding	-	CCDS29642.1	-	308	0	0.6	1.5	173.5	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000057817	Olfr1446	ENSMUST00000207741	ENSMUSP00000146402	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	34.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000024679	Ms4a6d	ENSMUST00000135351	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024679	Ms4a6d	ENSMUST00000125291	ENSMUSP00000115142	TRANSLATION	protein_coding	-	-	3	139	0	0	0	68.4	2	1,-3	-	-	1.842	MINOR
ENSMUSG00000024679	Ms4a6d	ENSMUST00000025582	ENSMUSP00000025582	TRANSLATION	protein_coding	-	CCDS29603.1	1	247	0	0	0.5	137.7	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024679	Ms4a6d	ENSMUST00000155669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045903	Npas4	ENSMUST00000237881	ENSMUSP00000157974	TRANSLATION	nonsense_mediated_decay	-	-	-	236	0	2.64	1.2	21.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000045903	Npas4	ENSMUST00000237172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045903	Npas4	ENSMUST00000056129	ENSMUSP00000062992	TRANSLATION	protein_coding	-	CCDS29445.1	1	802	0	3.66	5.1	66.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000036098	Myrf	ENSMUST00000088013	ENSMUSP00000085329	TRANSLATION	protein_coding	-	-	5	1138	0	0	0.5	366.7	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036098	Myrf	ENSMUST00000190922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036098	Myrf	ENSMUST00000189897	ENSMUSP00000139601	TRANSLATION	protein_coding	-	CCDS50387.1	5	1112	0	0	0.5	366.7	1	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000036098	Myrf	ENSMUST00000189439	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036098	Myrf	ENSMUST00000186056	ENSMUSP00000140871	TRANSLATION	protein_coding	-	-	1	937	0	0	0	366.7	1	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000036098	Myrf	ENSMUST00000186854	ENSMUSP00000140838	TRANSLATION	protein_coding	start	-	5	477	0	0	0	219.7	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000062376	Borcs7	ENSMUST00000074912	ENSMUSP00000074447	TRANSLATION	protein_coding	-	CCDS38011.1	1	105	0	0	10.9	125.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024887	Asah2	ENSMUST00000235395	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024887	Asah2	ENSMUST00000236122	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024887	Asah2	ENSMUST00000237104	ENSMUSP00000157424	TRANSLATION	protein_coding	-	CCDS29749.1	-	756	4	17.63	0.5	887.6	1	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000024887	Asah2	ENSMUST00000096119	ENSMUSP00000093830	TRANSLATION	protein_coding	-	CCDS29749.1	5	756	4	17.63	0.5	887.6	1	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000024887	Asah2	ENSMUST00000235273	ENSMUSP00000157557	TRANSLATION	protein_coding	-	-	-	468	2	9.38	0	513.2	1	-1,-5	-	-	2	MINOR
ENSMUSG00000024887	Asah2	ENSMUST00000236208	ENSMUSP00000157392	TRANSLATION	protein_coding	stop	-	-	303	2	5.3	0	324.9	1	-1,-5	-	-	-1	MINOR
ENSMUSG00000024887	Asah2	ENSMUST00000236030	ENSMUSP00000158185	TRANSLATION	protein_coding	-	CCDS29749.1	-	756	4	17.63	0.5	887.6	1	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000024887	Asah2	ENSMUST00000236504	ENSMUSP00000157744	TRANSLATION	protein_coding	-	CCDS29749.1	-	756	4	17.63	0.5	887.6	1	-1,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000024887	Asah2	ENSMUST00000237697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024887	Asah2	ENSMUST00000235213	ENSMUSP00000158290	TRANSLATION	protein_coding	-	-	-	755	4	17.63	0.5	879.7	1	-1,-5	-	-	15.526	ALTERNATIVE:2
ENSMUSG00000048029	Eno4	ENSMUST00000054280	ENSMUSP00000062584	TRANSLATION	protein_coding	-	-	1	619	2	5.974	0	98.5	0	-4,-5	-	-	13.7	ALTERNATIVE:2
ENSMUSG00000048029	Eno4	ENSMUST00000202382	ENSMUSP00000144656	TRANSLATION	protein_coding	start	-	5	431	2	6.124	0	72.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048029	Eno4	ENSMUST00000201123	ENSMUSP00000143831	TRANSLATION	nonsense_mediated_decay	start	-	3	177	1	2.34	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000048029	Eno4	ENSMUST00000200910	ENSMUSP00000144272	TRANSLATION	protein_coding	-	CCDS79725.1	5	618	2	5.974	0.5	98.5	0	-4,-5	-	-	13.7	PRINCIPAL:2
ENSMUSG00000024725	Ostf1	ENSMUST00000138860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024725	Ostf1	ENSMUST00000236615	ENSMUSP00000157998	TRANSLATION	protein_coding	-	-	-	212	0	6.3	0	115.9	0	-4,-6	-	-	11.598	MINOR
ENSMUSG00000024725	Ostf1	ENSMUST00000236728	ENSMUSP00000157475	TRANSLATION	nonsense_mediated_decay	-	-	-	38	0	1.132	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024725	Ostf1	ENSMUST00000156908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024725	Ostf1	ENSMUST00000025631	ENSMUSP00000025631	TRANSLATION	protein_coding	-	CCDS37930.1	1	215	0	6.5	18.3	115.9	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000060803	Gstp1	ENSMUST00000237773	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060803	Gstp1	ENSMUST00000237239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060803	Gstp1	ENSMUST00000235711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060803	Gstp1	ENSMUST00000236211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060803	Gstp1	ENSMUST00000237893	ENSMUSP00000158260	TRANSLATION	protein_coding	-	-	-	193	6	6	4.4	86.5	0	-4,-5	-	-	16.239	MINOR
ENSMUSG00000060803	Gstp1	ENSMUST00000237982	ENSMUSP00000157438	TRANSLATION	protein_coding	stop	-	-	160	6	4.75	0	62.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060803	Gstp1	ENSMUST00000236311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060803	Gstp1	ENSMUST00000169613	ENSMUSP00000129565	TRANSLATION	protein_coding	-	CCDS29411.1	1	210	9	6.5	7.5	91.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000060803	Gstp1	ENSMUST00000237273	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067199	Frat1	ENSMUST00000087155	ENSMUSP00000147726	TRANSLATION	protein_coding	-	CCDS84438.1	-	274	0	0.2	1.5	438.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000024800	Rpp30	ENSMUST00000235223	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024800	Rpp30	ENSMUST00000237841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024800	Rpp30	ENSMUST00000236197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024800	Rpp30	ENSMUST00000237251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024800	Rpp30	ENSMUST00000025714	ENSMUSP00000025714	TRANSLATION	protein_coding	-	CCDS29770.1	1	268	0	0	9.6	210.5	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000024905	Tesmin	ENSMUST00000127142	ENSMUSP00000122687	TRANSLATION	protein_coding	-	CCDS70912.1	1	295	9	2.6	0.5	48.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000024905	Tesmin	ENSMUST00000142193	ENSMUSP00000114171	TRANSLATION	protein_coding	-	CCDS70912.1	1	295	9	2.6	0.5	48.2	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000024905	Tesmin	ENSMUST00000151341	ENSMUSP00000114142	TRANSLATION	protein_coding	-	CCDS50339.1	1	277	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024905	Tesmin	ENSMUST00000025840	ENSMUSP00000025840	TRANSLATION	protein_coding	-	CCDS37880.1	1	475	9	2.6	1.5	48.2	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000025208	Mrpl43	ENSMUST00000097715	ENSMUSP00000095322	TRANSLATION	protein_coding	-	CCDS38000.1	1	159	0	3	7.5	41.3	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000025208	Mrpl43	ENSMUST00000235259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025060	Slk	ENSMUST00000123816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025060	Slk	ENSMUST00000130115	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025060	Slk	ENSMUST00000051691	ENSMUSP00000049977	TRANSLATION	protein_coding	-	CCDS38017.1	1	1233	21	7	1.5	493.4	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000025060	Slk	ENSMUST00000147841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025060	Slk	ENSMUST00000239141	ENSMUSP00000159128	TRANSLATION	protein_coding	start/stop	-	-	98	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025060	Slk	ENSMUST00000026043	ENSMUSP00000026043	TRANSLATION	protein_coding	-	CCDS50465.1	1	1202	21	7	1.5	447.1	0	-4,-6	-	-	15.222	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000169765	ENSMUSP00000133075	TRANSLATION	protein_coding	start/stop	-	5	129	0	0	0	51.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000168484	ENSMUSP00000126881	TRANSLATION	nonsense_mediated_decay	-	-	1	357	0	0	0	294.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000167820	ENSMUSP00000130399	TRANSLATION	protein_coding	start/stop	-	3	286	0	0	0	174.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000164776	ENSMUSP00000129478	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000167927	ENSMUSP00000132483	TRANSLATION	nonsense_mediated_decay	-	-	2	357	0	0	0	294.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000169779	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000163287	ENSMUSP00000128653	TRANSLATION	protein_coding	start	-	5	885	0	0	0	666.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000169775	ENSMUSP00000128234	TRANSLATION	nonsense_mediated_decay	-	-	1	174	0	0	0	84.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000166090	ENSMUSP00000131219	TRANSLATION	nonsense_mediated_decay	start	-	5	501	0	0	0	316	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000171755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000026168	ENSMUSP00000026168	TRANSLATION	protein_coding	-	-	5	988	0	0	0	568.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000171561	ENSMUSP00000130900	TRANSLATION	protein_coding	-	CCDS29818.1	1	1031	0	0	0.5	673.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025159	Mms19	ENSMUST00000169933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000170209	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000165043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000163398	ENSMUSP00000126864	TRANSLATION	nonsense_mediated_decay	-	-	5	75	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025159	Mms19	ENSMUST00000166517	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025159	Mms19	ENSMUST00000168737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113467	ENSMUSP00000109095	TRANSLATION	protein_coding	-	-	2	60	0	0.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000123661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113468	ENSMUSP00000109096	TRANSLATION	protein_coding	stop	-	5	97	0	2.294	0	32.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000145611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113475	ENSMUSP00000109103	TRANSLATION	protein_coding	-	-	5	141	0	2.744	0	36.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000122930	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032946	Rasgrp2	ENSMUST00000150713	ENSMUSP00000120949	TRANSLATION	protein_coding	stop	-	3	95	0	2.294	0	31.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113472	ENSMUSP00000109100	TRANSLATION	protein_coding	-	-	1	141	0	2.744	0	36.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000149205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000035716	ENSMUSP00000041135	TRANSLATION	protein_coding	-	CCDS37898.1	2	608	8	11.724	7.5	255.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032946	Rasgrp2	ENSMUST00000139522	ENSMUSP00000123036	TRANSLATION	nonsense_mediated_decay	-	-	3	125	0	2.744	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113469	ENSMUSP00000109097	TRANSLATION	protein_coding	-	-	5	70	0	0.75	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000152022	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113471	ENSMUSP00000109099	TRANSLATION	protein_coding	-	-	1	141	0	2.744	0	36.2	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000138555	ENSMUSP00000121635	TRANSLATION	protein_coding	stop	-	3	231	0	5.074	0	84	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000133968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032946	Rasgrp2	ENSMUST00000135532	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000167240	ENSMUSP00000129873	TRANSLATION	protein_coding	-	CCDS37898.1	5	608	8	11.724	7.5	255.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000032946	Rasgrp2	ENSMUST00000130480	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000146831	ENSMUSP00000120630	TRANSLATION	protein_coding	stop	-	3	164	0	3.744	0	36.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000127021	ENSMUSP00000119740	TRANSLATION	nonsense_mediated_decay	-	-	5	70	0	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000148906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032946	Rasgrp2	ENSMUST00000146601	ENSMUSP00000117681	TRANSLATION	protein_coding	stop	-	5	58	0	1.428	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000032946	Rasgrp2	ENSMUST00000113476	ENSMUSP00000109104	TRANSLATION	protein_coding	-	CCDS37898.1	5	608	8	11.724	7.5	255.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024891	Slc29a2	ENSMUST00000236152	ENSMUSP00000157780	TRANSLATION	protein_coding	-	CCDS50354.1	-	456	0	0	3.9	381.5	24	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000024891	Slc29a2	ENSMUST00000025826	ENSMUSP00000025826	TRANSLATION	protein_coding	-	-	1	427	0	0	0	218	19	-4,-5	-	-	0	MINOR
ENSMUSG00000024891	Slc29a2	ENSMUST00000235933	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024891	Slc29a2	ENSMUST00000235416	ENSMUSP00000157993	TRANSLATION	protein_coding	stop	-	-	228	0	0	0	104.9	15	-4,-5	-	-	-1	MINOR
ENSMUSG00000024891	Slc29a2	ENSMUST00000237267	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024891	Slc29a2	ENSMUST00000237371	ENSMUSP00000157983	TRANSLATION	protein_coding	-	-	-	404	0	0	0	381.5	23	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000024892	Pcx	ENSMUST00000236457	ENSMUSP00000157492	TRANSLATION	protein_coding	stop	-	-	97	0	1.4	0	67.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024892	Pcx	ENSMUST00000238089	ENSMUSP00000157436	TRANSLATION	protein_coding	stop	-	-	120	0	2.06	0	106.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024892	Pcx	ENSMUST00000224726	ENSMUSP00000153479	TRANSLATION	protein_coding	-	CCDS29430.1	-	1178	51	18.86	7.5	904.4	0	-4,0	-	-	21	PRINCIPAL:3
ENSMUSG00000024892	Pcx	ENSMUST00000225189	ENSMUSP00000152918	TRANSLATION	protein_coding	stop	-	-	116	0	2.06	0	92.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000024892	Pcx	ENSMUST00000223659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024892	Pcx	ENSMUST00000113825	ENSMUSP00000109456	TRANSLATION	protein_coding	-	CCDS29430.1	1	1178	51	18.86	7.5	904.4	0	-4,0	-	-	21	PRINCIPAL:3
ENSMUSG00000024892	Pcx	ENSMUST00000068004	ENSMUSP00000063825	TRANSLATION	protein_coding	-	CCDS50352.1	1	1179	51	18.86	7.5	904.4	0	-4,0	-	-	21	ALTERNATIVE:1
ENSMUSG00000048138	Dmrt2	ENSMUST00000053068	ENSMUSP00000059654	TRANSLATION	protein_coding	-	CCDS29719.1	1	561	8	0.6	2.7	75.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071604	Fam189a2	ENSMUST00000236123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071604	Fam189a2	ENSMUST00000096164	ENSMUSP00000093878	TRANSLATION	protein_coding	-	CCDS50408.1	5	596	0	0	0.5	107.8	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033417	Cacul1	ENSMUST00000081790	ENSMUSP00000080480	TRANSLATION	protein_coding	-	CCDS38034.1	1	377	0	1.62	1.5	44.4	0	-4,-5	-	-	11.832	PRINCIPAL:3
ENSMUSG00000033417	Cacul1	ENSMUST00000237682	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033417	Cacul1	ENSMUST00000238073	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033417	Cacul1	ENSMUST00000166712	ENSMUSP00000127014	TRANSLATION	protein_coding	-	CCDS50484.1	5	347	0	1.62	0.5	44.4	0	-4,-5	-	-	11.832	ALTERNATIVE:2
ENSMUSG00000033417	Cacul1	ENSMUST00000111460	ENSMUSP00000107086	TRANSLATION	protein_coding	-	CCDS50483.1	1	304	0	1.62	0.5	45.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000033033	Calhm2	ENSMUST00000035822	ENSMUSP00000047278	TRANSLATION	protein_coding	-	CCDS29889.1	1	323	0	0	8.8	287.3	3	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000033033	Calhm2	ENSMUST00000140512	ENSMUSP00000121661	TRANSLATION	protein_coding	-	-	1	322	0	0	0	287.3	3	-4,-7	-	-	6	MINOR
ENSMUSG00000025078	Nhlrc2	ENSMUST00000071423	ENSMUSP00000071370	TRANSLATION	protein_coding	-	CCDS29918.1	1	725	0	2.385	2.7	127.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025078	Nhlrc2	ENSMUST00000236979	ENSMUSP00000158506	TRANSLATION	nonsense_mediated_decay	start	-	-	125	0	0.52	0	22.7	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024953	Prdx5	ENSMUST00000025904	ENSMUSP00000025904	TRANSLATION	protein_coding	-	CCDS29507.1	1	210	0	4.3	1.5	54.5	0	-4,0	-	-	12	PRINCIPAL:2
ENSMUSG00000024953	Prdx5	ENSMUST00000145300	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024953	Prdx5	ENSMUST00000238095	ENSMUSP00000158249	TRANSLATION	protein_coding	start	-	-	142	0	3	0	53.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024953	Prdx5	ENSMUST00000149261	ENSMUSP00000135084	TRANSLATION	protein_coding	-	-	2	213	0	4	0	54.5	0	-4,-6	-	-	11.4	ALTERNATIVE:2
ENSMUSG00000024953	Prdx5	ENSMUST00000173091	ENSMUSP00000134521	TRANSLATION	protein_coding	-	-	5	166	0	3.3	0	23	0	-4,0	-	-	6.534	MINOR
ENSMUSG00000040022	Rab11fip2	ENSMUST00000171986	ENSMUSP00000128813	TRANSLATION	protein_coding	-	CCDS50482.1	1	370	0	1.5	0.5	63.2	0	-4,-6	-	-	5.694	MINOR
ENSMUSG00000040022	Rab11fip2	ENSMUST00000051996	ENSMUSP00000059978	TRANSLATION	protein_coding	-	CCDS38033.1	1	529	0	2.43	0.5	130	0	-4,-6	-	-	12	MINOR
ENSMUSG00000040022	Rab11fip2	ENSMUST00000170819	ENSMUSP00000133151	TRANSLATION	protein_coding	-	-	5	512	0	2.43	7.1	130	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000024974	Smc3	ENSMUST00000171083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024974	Smc3	ENSMUST00000157053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024974	Smc3	ENSMUST00000025930	ENSMUSP00000025930	TRANSLATION	protein_coding	-	CCDS38025.1	1	1217	15	14.32	16.1	287.3	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000024878	Cbwd1	ENSMUST00000236790	ENSMUSP00000158317	TRANSLATION	nonsense_mediated_decay	-	-	-	51	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024878	Cbwd1	ENSMUST00000025815	ENSMUSP00000025815	TRANSLATION	protein_coding	-	CCDS37942.1	1	393	12	4.455	1.5	60.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024878	Cbwd1	ENSMUST00000236250	ENSMUSP00000157754	TRANSLATION	nonsense_mediated_decay	start	-	-	62	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024878	Cbwd1	ENSMUST00000237315	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024878	Cbwd1	ENSMUST00000235225	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000237718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000113852	ENSMUSP00000109483	TRANSLATION	protein_coding	-	-	1	648	8	3.65	1.5	157.9	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000034616	Ssh3	ENSMUST00000235685	ENSMUSP00000157591	TRANSLATION	nonsense_mediated_decay	start	-	-	138	1	1.9	0	63.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034616	Ssh3	ENSMUST00000235563	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000237790	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034616	Ssh3	ENSMUST00000236721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000237501	ENSMUSP00000158089	TRANSLATION	nonsense_mediated_decay	-	-	-	52	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034616	Ssh3	ENSMUST00000236440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000037992	ENSMUSP00000047718	TRANSLATION	protein_coding	-	CCDS29425.1	1	649	8	3.65	0.5	157.9	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000034616	Ssh3	ENSMUST00000235731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000235815	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034616	Ssh3	ENSMUST00000237670	ENSMUSP00000158396	TRANSLATION	protein_coding	start/stop	-	-	242	0	0.9	0	50.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000034616	Ssh3	ENSMUST00000236794	ENSMUSP00000158486	TRANSLATION	protein_coding	-	-	-	653	8	3.65	0.5	157.9	0	-4,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000024899	Papss2	ENSMUST00000025833	ENSMUSP00000025833	TRANSLATION	protein_coding	-	CCDS37960.1	1	621	38	11	0.5	636.5	0	-4,-7	-	-	17.622	MINOR
ENSMUSG00000024899	Papss2	ENSMUST00000236290	ENSMUSP00000158330	TRANSLATION	protein_coding	-	-	-	616	38	11	0.5	640.6	0	-4,-7	-	-	17.868	MINOR
ENSMUSG00000024899	Papss2	ENSMUST00000235594	ENSMUSP00000157455	TRANSLATION	protein_coding	-	-	-	614	38	11.066	11.6	640.6	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000094721	Olfr1462	ENSMUST00000076832	ENSMUSP00000076107	TRANSLATION	protein_coding	-	CCDS29653.1	-	307	0	0	2.8	174.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000094721	Olfr1462	ENSMUST00000208533	ENSMUSP00000147174	TRANSLATION	protein_coding	-	CCDS29653.1	2	307	0	0	2.8	174.2	5	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025216	Lbx1	ENSMUST00000099401	ENSMUSP00000096997	TRANSLATION	protein_coding	-	CCDS29859.1	1	282	0	0.6	0.5	76.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040913	Fbxw4	ENSMUST00000162433	ENSMUSP00000124998	TRANSLATION	protein_coding	-	-	3	113	0	1.99	0	14.2	0	-4,-5	-	-	1.008	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000046869	ENSMUSP00000036505	TRANSLATION	protein_coding	-	CCDS29863.1	1	410	0	5.82	0.5	84.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000040913	Fbxw4	ENSMUST00000160018	ENSMUSP00000125641	TRANSLATION	protein_coding	-	-	3	59	0	0.48	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000162879	ENSMUSP00000124675	TRANSLATION	protein_coding	stop	-	2	102	0	1.75	0	14.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000160718	ENSMUSP00000157690	TRANSLATION	protein_coding	-	-	2	113	0	1.99	0	14.2	0	-4,-5	-	-	1.008	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000160438	ENSMUSP00000125136	TRANSLATION	protein_coding	stop	-	5	78	0	1.48	0	14.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000160003	ENSMUSP00000124604	TRANSLATION	protein_coding	-	-	3	83	0	1.51	0	14.2	0	-4,-5	-	-	1.008	MINOR
ENSMUSG00000040913	Fbxw4	ENSMUST00000161039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040913	Fbxw4	ENSMUST00000161556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040913	Fbxw4	ENSMUST00000159590	ENSMUSP00000124084	TRANSLATION	protein_coding	stop	-	3	166	0	2.05	0	32.8	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000086961	ENSMUSP00000084180	TRANSLATION	nonsense_mediated_decay	-	-	5	251	4	5.622	0	201.5	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000235926	ENSMUSP00000158103	TRANSLATION	nonsense_mediated_decay	-	-	-	78	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000174731	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025041	Nt5c2	ENSMUST00000236783	ENSMUSP00000158526	TRANSLATION	protein_coding	stop	-	-	87	3	2.66	0	123.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000237639	ENSMUSP00000158192	TRANSLATION	nonsense_mediated_decay	-	-	-	62	4	1.99	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000235596	ENSMUSP00000157854	TRANSLATION	nonsense_mediated_decay	-	-	-	62	4	1.99	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000172239	ENSMUSP00000130898	TRANSLATION	protein_coding	-	CCDS50462.1	5	586	14	14.372	1.5	588.1	0	-4,-2	-	-	18.192	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000236924	ENSMUSP00000158535	TRANSLATION	protein_coding	stop	-	-	97	3	2.99	0	89.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000235234	ENSMUSP00000157802	TRANSLATION	protein_coding	-	CCDS50461.1	-	585	14	14.372	1.5	588.1	0	-4,0	-	-	18.192	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000168536	ENSMUSP00000129126	TRANSLATION	protein_coding	-	CCDS29883.1	1	560	14	14.24	8.8	588.1	0	-4,-5	-	-	20.736	PRINCIPAL:1
ENSMUSG00000025041	Nt5c2	ENSMUST00000236501	ENSMUSP00000158280	TRANSLATION	protein_coding	-	CCDS29883.1	-	560	14	14.24	8.8	588.1	0	-4,-5	-	-	20.736	PRINCIPAL:1
ENSMUSG00000025041	Nt5c2	ENSMUST00000238106	ENSMUSP00000158569	TRANSLATION	protein_coding	stop	-	-	59	4	1.99	0	38.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025041	Nt5c2	ENSMUST00000235296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025041	Nt5c2	ENSMUST00000237658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025041	Nt5c2	ENSMUST00000236727	ENSMUSP00000158576	TRANSLATION	protein_coding	-	-	-	528	14	13.24	3.5	588.1	0	-4,-6	-	-	16.701	MINOR
ENSMUSG00000074811	Hps6	ENSMUST00000099393	ENSMUSP00000096991	TRANSLATION	protein_coding	-	CCDS29869.1	-	805	0	0	2.7	925.2	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000032648	Pygm	ENSMUST00000113483	ENSMUSP00000109111	TRANSLATION	protein_coding	-	-	5	754	30	16.33	1.2	1038.8	0	-4,-6	-	-	4.386	MINOR
ENSMUSG00000032648	Pygm	ENSMUST00000035269	ENSMUSP00000047564	TRANSLATION	protein_coding	-	CCDS29504.1	1	842	34	18.83	17.5	1157.5	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000032648	Pygm	ENSMUST00000142755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000032648	Pygm	ENSMUST00000139775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025204	Ndufb8	ENSMUST00000166557	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025204	Ndufb8	ENSMUST00000167027	ENSMUSP00000130918	TRANSLATION	protein_coding	stop	-	5	138	0	2.08	0	144.3	0	-3,1	-	-	-1	MINOR
ENSMUSG00000025204	Ndufb8	ENSMUST00000171415	ENSMUSP00000128192	TRANSLATION	protein_coding	-	CCDS84446.1	1	157	0	3.08	0.5	214.1	1	-3,1	-	-	7.332	MINOR
ENSMUSG00000025204	Ndufb8	ENSMUST00000168083	ENSMUSP00000132740	TRANSLATION	nonsense_mediated_decay	-	-	3	84	0	0	0	0	0	-3,1	-	-	-1	MINOR
ENSMUSG00000025204	Ndufb8	ENSMUST00000169304	ENSMUSP00000132421	TRANSLATION	protein_coding	start	-	2	111	0	2.25	0	165.8	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000025204	Ndufb8	ENSMUST00000026222	ENSMUSP00000026222	TRANSLATION	protein_coding	-	CCDS29851.1	1	186	0	4.08	6.3	258.6	1	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000025204	Ndufb8	ENSMUST00000164543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025204	Ndufb8	ENSMUST00000168474	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025204	Ndufb8	ENSMUST00000169181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024854	Pold4	ENSMUST00000025773	ENSMUSP00000025773	TRANSLATION	protein_coding	-	CCDS29424.1	1	107	0	0	6.3	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000024854	Pold4	ENSMUST00000235306	ENSMUSP00000157888	TRANSLATION	protein_coding	-	-	-	32	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024854	Pold4	ENSMUST00000237518	ENSMUSP00000158476	TRANSLATION	protein_coding	-	-	-	102	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000117873	Gm45928	ENSMUST00000237171	ENSMUSP00000157518	TRANSLATION	protein_coding,RT	-	-	-	80	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:5
ENSMUSG00000117873	Gm45928	ENSMUST00000236364	ENSMUSP00000157725	TRANSLATION	nonsense_mediated_decay,RT	-	-	-	76	0	0	0	0	0	1,-2	-	-	-1	ALTERNATIVE:2
ENSMUSG00000024862	Klc2	ENSMUST00000113728	ENSMUSP00000109357	TRANSLATION	protein_coding	-	-	5	617	0	7.83	0.5	150.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000024862	Klc2	ENSMUST00000156717	ENSMUSP00000122458	TRANSLATION	protein_coding	stop	-	5	166	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024862	Klc2	ENSMUST00000025798	ENSMUSP00000025798	TRANSLATION	protein_coding	-	-	5	617	0	7.83	0.5	150.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000024862	Klc2	ENSMUST00000113727	ENSMUSP00000109356	TRANSLATION	protein_coding	-	-	5	617	0	7.83	0.5	150.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000024862	Klc2	ENSMUST00000135827	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024862	Klc2	ENSMUST00000142255	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024862	Klc2	ENSMUST00000149806	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024862	Klc2	ENSMUST00000137403	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024862	Klc2	ENSMUST00000116563	ENSMUSP00000112262	TRANSLATION	protein_coding	-	CCDS37889.1	1	619	0	7.83	7.5	150.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000032773	Chrm1	ENSMUST00000177197	ENSMUSP00000135356	TRANSLATION	protein_coding	stop	-	1	74	0	1	0	30.9	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000032773	Chrm1	ENSMUST00000035444	ENSMUSP00000042632	TRANSLATION	protein_coding	-	CCDS29539.1	1	460	0	1.7	7.5	274.7	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000032773	Chrm1	ENSMUST00000163785	ENSMUSP00000126103	TRANSLATION	protein_coding	-	CCDS29539.1	1	460	0	1.7	7.5	274.7	8	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000024924	Vldlr	ENSMUST00000163729	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024924	Vldlr	ENSMUST00000047645	ENSMUSP00000049145	TRANSLATION	protein_coding	-	CCDS84429.1	5	804	64	14.45	5.1	689.1	2	2,-3	-	-	10.7	MINOR
ENSMUSG00000024924	Vldlr	ENSMUST00000164509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024924	Vldlr	ENSMUST00000165761	ENSMUSP00000130382	TRANSLATION	protein_coding	start/stop	-	3	258	14	5.86	0	195.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024924	Vldlr	ENSMUST00000167487	ENSMUSP00000127329	TRANSLATION	protein_coding	-	CCDS29721.1	1	873	70	15.75	5.1	734.1	2	2,-3	-	-	20	PRINCIPAL:3
ENSMUSG00000024924	Vldlr	ENSMUST00000172302	ENSMUSP00000126730	TRANSLATION	protein_coding	-	CCDS50411.1	1	845	70	15.45	5.1	734.1	2	2,-3	-	-	19.4	ALTERNATIVE:1
ENSMUSG00000024924	Vldlr	ENSMUST00000164746	ENSMUSP00000128193	TRANSLATION	protein_coding	stop	-	5	89	6	1.75	0	54.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000024924	Vldlr	ENSMUST00000025866	ENSMUSP00000025866	TRANSLATION	nonsense_mediated_decay	-	-	5	498	69	9.5	0	467.9	0	2,-3	-	-	-1	MINOR
ENSMUSG00000038498	Catsper1	ENSMUST00000235380	ENSMUSP00000157759	TRANSLATION	protein_coding	start	-	-	496	0	3.48	0	63.6	5	-4,-6	-	-	-1	MINOR
ENSMUSG00000038498	Catsper1	ENSMUST00000043380	ENSMUSP00000045430	TRANSLATION	protein_coding	-	CCDS29456.1	1	686	0	4.48	0.5	113.8	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000060878	Olfr1420	ENSMUST00000215766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060878	Olfr1420	ENSMUST00000072784	ENSMUSP00000072563	TRANSLATION	protein_coding	-	CCDS29617.1	-	309	0	0.36	6.3	181.9	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000060878	Olfr1420	ENSMUST00000217281	ENSMUSP00000149208	TRANSLATION	protein_coding	-	CCDS29617.1	5	309	0	0.36	6.3	181.9	7	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000039097	Rln1	ENSMUST00000182039	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039097	Rln1	ENSMUST00000044143	ENSMUSP00000043376	TRANSLATION	protein_coding	-	CCDS29733.1	1	185	0	0	1.5	62.2	0	4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000024784	Gpha2	ENSMUST00000113526	ENSMUSP00000109154	TRANSLATION	protein_coding	-	CCDS29498.1	5	128	0	0	5.1	21.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000024784	Gpha2	ENSMUST00000025698	ENSMUSP00000025698	TRANSLATION	protein_coding	-	CCDS29498.1	1	128	0	0	5.1	21.4	0	4,-1	-	-	8	PRINCIPAL:1
ENSMUSG00000045126	Olfr1445	ENSMUST00000049624	ENSMUSP00000058933	TRANSLATION	protein_coding	-	CCDS29641.1	-	314	0	0	8.8	183.6	0	-3,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000024969	Mark2	ENSMUST00000168852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024969	Mark2	ENSMUST00000051711	ENSMUSP00000108969	TRANSLATION	protein_coding	-	CCDS37904.1	1	776	18	12.389	5.1	355.5	0	-4,-5	-	-	19.548	PRINCIPAL:4
ENSMUSG00000024969	Mark2	ENSMUST00000165881	ENSMUSP00000126753	TRANSLATION	protein_coding	start/stop	-	5	303	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000171393	ENSMUSP00000129894	TRANSLATION	protein_coding	stop	-	3	193	18	5.66	0	197	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000168872	ENSMUSP00000128560	TRANSLATION	protein_coding	-	-	5	707	18	12.389	3.4	355.5	0	-4,-5	-	-	18.906	ALTERNATIVE:2
ENSMUSG00000024969	Mark2	ENSMUST00000166461	ENSMUSP00000128549	TRANSLATION	protein_coding	start	-	3	307	0	2	0	74.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000167767	ENSMUSP00000132482	TRANSLATION	protein_coding	start/stop	-	3	266	0	1	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000170768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024969	Mark2	ENSMUST00000171721	ENSMUSP00000129506	TRANSLATION	protein_coding	start	-	5	776	18	12.389	0	355.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000032557	ENSMUSP00000032557	TRANSLATION	protein_coding	-	CCDS37903.1	1	731	18	12.389	3.9	355.5	0	-4,-5	-	-	19.094	ALTERNATIVE:2
ENSMUSG00000024969	Mark2	ENSMUST00000164205	ENSMUSP00000127827	TRANSLATION	protein_coding	-	CCDS50378.1	1	722	18	12.389	6.3	355.5	0	-4,-5	-	-	20	ALTERNATIVE:1
ENSMUSG00000024969	Mark2	ENSMUST00000164129	ENSMUSP00000129067	TRANSLATION	nonsense_mediated_decay	start	-	3	54	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000171352	ENSMUSP00000129490	TRANSLATION	protein_coding	start	-	1	204	0	0.381	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000163345	ENSMUSP00000125944	TRANSLATION	protein_coding	start/stop	-	3	174	0	0	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000165286	ENSMUSP00000126468	TRANSLATION	protein_coding	-	-	5	716	18	12.389	2.4	355.5	0	-4,-5	-	-	18.528	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000168324	ENSMUSP00000131266	TRANSLATION	protein_coding	stop	-	3	24	0	0.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000165989	ENSMUSP00000129924	TRANSLATION	protein_coding	stop	-	3	89	8	2.228	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000171044	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024969	Mark2	ENSMUST00000025921	ENSMUSP00000025921	TRANSLATION	protein_coding	-	CCDS37905.1	1	743	18	11.991	5.3	355.5	0	-4,-7	-	-	18.824	MINOR
ENSMUSG00000024969	Mark2	ENSMUST00000165965	ENSMUSP00000131684	TRANSLATION	protein_coding	-	CCDS37904.1	1	776	18	12.389	5.1	355.5	0	-4,-5	-	-	19.548	PRINCIPAL:4
ENSMUSG00000024969	Mark2	ENSMUST00000169541	ENSMUSP00000128779	TRANSLATION	protein_coding	stop	-	5	110	8	3.058	0	43.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046138	9930021J03Rik	ENSMUST00000177155	ENSMUSP00000135473	TRANSLATION	protein_coding	-	-	5	2027	0	0.56	0.5	21.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000046138	9930021J03Rik	ENSMUST00000175764	ENSMUSP00000135031	TRANSLATION	protein_coding	start	-	5	1327	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000046138	9930021J03Rik	ENSMUST00000176773	ENSMUSP00000135025	TRANSLATION	nonsense_mediated_decay	start	-	5	130	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046138	9930021J03Rik	ENSMUST00000175726	ENSMUSP00000135696	TRANSLATION	protein_coding	start	-	5	1972	0	0.36	0	21.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025034	Trim8	ENSMUST00000235934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025034	Trim8	ENSMUST00000026008	ENSMUSP00000026008	TRANSLATION	protein_coding	-	CCDS38009.1	1	551	12	0.8	13.7	41.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024978	Gpam	ENSMUST00000061856	ENSMUSP00000057635	TRANSLATION	protein_coding	-	CCDS29906.1	1	827	0	0	2.7	75.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024978	Gpam	ENSMUST00000235957	ENSMUSP00000157722	TRANSLATION	protein_coding	-	CCDS29906.1	-	827	0	0	2.7	75.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024978	Gpam	ENSMUST00000237146	ENSMUSP00000158322	TRANSLATION	protein_coding	-	CCDS29906.1	-	827	0	0	2.7	75.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024978	Gpam	ENSMUST00000236422	ENSMUSP00000158199	TRANSLATION	protein_coding	stop	-	-	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024978	Gpam	ENSMUST00000236859	ENSMUSP00000157914	TRANSLATION	nonsense_mediated_decay	-	-	-	681	0	0	0	75.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040451	Sgms1	ENSMUST00000134415	ENSMUSP00000115785	TRANSLATION	nonsense_mediated_decay	-	-	5	220	0	1.6	0.5	23.3	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000040451	Sgms1	ENSMUST00000142618	ENSMUSP00000117336	TRANSLATION	protein_coding	-	CCDS29750.1	1	419	0	1.6	1.5	120.2	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040451	Sgms1	ENSMUST00000124483	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040451	Sgms1	ENSMUST00000236410	ENSMUSP00000157976	TRANSLATION	nonsense_mediated_decay	-	-	-	293	0	1.6	0.5	23.3	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000040451	Sgms1	ENSMUST00000131768	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040451	Sgms1	ENSMUST00000099514	ENSMUSP00000097114	TRANSLATION	protein_coding	-	CCDS29750.1	1	419	0	1.6	1.5	120.2	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040451	Sgms1	ENSMUST00000124012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040451	Sgms1	ENSMUST00000149107	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040451	Sgms1	ENSMUST00000151822	ENSMUSP00000114683	TRANSLATION	protein_coding	stop	-	3	34	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040451	Sgms1	ENSMUST00000126332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040451	Sgms1	ENSMUST00000151289	ENSMUSP00000123395	TRANSLATION	protein_coding	-	CCDS29750.1	1	419	0	1.6	1.5	120.2	9	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000040451	Sgms1	ENSMUST00000152340	ENSMUSP00000119869	TRANSLATION	nonsense_mediated_decay	-	-	2	217	0	1.6	0.5	23.3	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000040451	Sgms1	ENSMUST00000141655	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040451	Sgms1	ENSMUST00000149934	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040451	Sgms1	ENSMUST00000141252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000237504	ENSMUSP00000158382	TRANSLATION	protein_coding	stop	-	-	126	0	0.45	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000083282	Ctsf	ENSMUST00000119694	ENSMUSP00000112481	TRANSLATION	protein_coding	-	CCDS29440.1	1	462	4	8.08	0.5	277	0	3,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000083282	Ctsf	ENSMUST00000237755	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000235464	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000235354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000237401	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000238118	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000237784	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000235264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000083282	Ctsf	ENSMUST00000236406	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000235931	-	NO_TRANSLATION	retained_intron
ENSMUSG00000083282	Ctsf	ENSMUST00000237011	ENSMUSP00000158491	TRANSLATION	protein_coding	stop	-	-	128	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000025209	Twnk	ENSMUST00000236685	ENSMUSP00000157397	TRANSLATION	protein_coding	-	-	-	230	0	0.76	5.1	0	0	-4,-5	-	-	5.93	MINOR
ENSMUSG00000025209	Twnk	ENSMUST00000026227	ENSMUSP00000026227	TRANSLATION	protein_coding	-	CCDS29854.1	1	685	7	1.16	1.5	33.7	0	-3,0	-	-	18.244	PRINCIPAL:1
ENSMUSG00000024900	Cpt1a	ENSMUST00000235968	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024900	Cpt1a	ENSMUST00000238027	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024900	Cpt1a	ENSMUST00000237457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024900	Cpt1a	ENSMUST00000237562	ENSMUSP00000158480	TRANSLATION	protein_coding	stop	-	-	185	0	1.8	0	97.4	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000024900	Cpt1a	ENSMUST00000237938	ENSMUSP00000158035	TRANSLATION	protein_coding	stop	-	-	401	3	5.18	0	342.2	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000024900	Cpt1a	ENSMUST00000238015	ENSMUSP00000157988	TRANSLATION	protein_coding	stop	-	-	251	0	2.44	0	153.8	1	-4,-6	-	-	-1	MINOR
ENSMUSG00000024900	Cpt1a	ENSMUST00000237444	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024900	Cpt1a	ENSMUST00000025835	ENSMUSP00000025835	TRANSLATION	protein_coding	-	CCDS29395.1	1	773	27	10.47	6.3	752.1	1	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000055044	Pdlim1	ENSMUST00000068439	ENSMUSP00000064545	TRANSLATION	protein_coding	-	CCDS37977.1	1	327	9	4.3	8.3	197.4	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000055044	Pdlim1	ENSMUST00000182813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055044	Pdlim1	ENSMUST00000182432	ENSMUSP00000138383	TRANSLATION	protein_coding	stop	-	3	198	0	2.3	0	114.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000055044	Pdlim1	ENSMUST00000182540	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055044	Pdlim1	ENSMUST00000182636	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067522	Olfr76	ENSMUST00000213471	ENSMUSP00000154269	TRANSLATION	protein_coding	-	-	5	329	0	0	0	181.2	9	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000067522	Olfr76	ENSMUST00000087822	ENSMUSP00000085124	TRANSLATION	protein_coding	-	CCDS29623.1	-	317	0	0	3.9	181.2	9	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000067522	Olfr76	ENSMUST00000216205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067522	Olfr76	ENSMUST00000214676	ENSMUSP00000149014	TRANSLATION	protein_coding	-	CCDS29623.1	5	317	0	0	3.9	181.2	9	-4,-5	-	-	7	PRINCIPAL:2
ENSMUSG00000024824	Rad9a	ENSMUST00000025740	ENSMUSP00000025740	TRANSLATION	protein_coding	-	CCDS29422.1	1	389	0	8.08	0.5	326	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000024824	Rad9a	ENSMUST00000235367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024824	Rad9a	ENSMUST00000237963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024824	Rad9a	ENSMUST00000235742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024824	Rad9a	ENSMUST00000237723	ENSMUSP00000157774	TRANSLATION	protein_coding	stop	-	-	80	0	2.5	0	91.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024824	Rad9a	ENSMUST00000237278	ENSMUSP00000158136	TRANSLATION	nonsense_mediated_decay	-	-	-	73	0	1.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024824	Rad9a	ENSMUST00000237467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024824	Rad9a	ENSMUST00000237923	ENSMUSP00000158283	TRANSLATION	protein_coding	stop	-	-	144	0	4.25	0	117.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000109022	Olfr1432	ENSMUST00000180978	ENSMUSP00000146641	TRANSLATION	protein_coding	start/stop	-	-	310	0	0	0	174.6	8	-3,-4	-	-	-1	MINOR
ENSMUSG00000109022	Olfr1432	ENSMUST00000207710	ENSMUSP00000146529	TRANSLATION	protein_coding	-	-	5	346	0	0	0.5	174.6	8	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096273	Olfr1474	ENSMUST00000220113	ENSMUSP00000151810	TRANSLATION	protein_coding	-	CCDS29661.1	5	314	0	1.18	1.5	177.1	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000096273	Olfr1474	ENSMUST00000207529	ENSMUSP00000147143	TRANSLATION	protein_coding	stop	-	3	111	0	0.6	0	75	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000096273	Olfr1474	ENSMUST00000096202	ENSMUSP00000093916	TRANSLATION	protein_coding	-	CCDS29661.1	-	314	0	1.18	1.5	177.1	8	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025024	Smndc1	ENSMUST00000025997	ENSMUSP00000025997	TRANSLATION	protein_coding	-	CCDS29902.1	1	238	5	2.33	14.8	57.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025024	Smndc1	ENSMUST00000236245	ENSMUSP00000158182	TRANSLATION	protein_coding	stop	-	-	83	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025024	Smndc1	ENSMUST00000237529	ENSMUSP00000157540	TRANSLATION	protein_coding	-	CCDS29902.1	-	238	5	2.33	14.8	57.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025024	Smndc1	ENSMUST00000235830	ENSMUSP00000158001	TRANSLATION	nonsense_mediated_decay	-	-	-	145	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025024	Smndc1	ENSMUST00000236962	ENSMUSP00000157887	TRANSLATION	nonsense_mediated_decay	-	-	-	102	1	1	0	24.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063434	Sorcs3	ENSMUST00000078880	ENSMUSP00000077919	TRANSLATION	protein_coding	-	CCDS38020.1	1	1219	0	9.3	1.5	510.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000063434	Sorcs3	ENSMUST00000236094	-	NO_TRANSLATION	retained_intron
ENSMUSG00000063434	Sorcs3	ENSMUST00000235967	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040105	Plpp6	ENSMUST00000045674	ENSMUSP00000047776	TRANSLATION	protein_coding	-	CCDS29728.1	-	292	4	0.16	1.5	62.7	0	-4,-2	-	-	16	PRINCIPAL:1
ENSMUSG00000024681	Ms4a3	ENSMUST00000190642	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024681	Ms4a3	ENSMUST00000112984	ENSMUSP00000108608	TRANSLATION	protein_coding	-	CCDS29605.1	1	213	0	0	0.5	119.6	3	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024681	Ms4a3	ENSMUST00000186023	ENSMUSP00000140508	TRANSLATION	protein_coding	-	CCDS29605.1	1	213	0	0	0.5	119.6	3	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000025068	Gsto1	ENSMUST00000236902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025068	Gsto1	ENSMUST00000026050	ENSMUSP00000026050	TRANSLATION	protein_coding	-	CCDS29893.1	1	240	11	6.91	0.5	106.8	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025068	Gsto1	ENSMUST00000143694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025068	Gsto1	ENSMUST00000130157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025068	Gsto1	ENSMUST00000237121	ENSMUSP00000157808	TRANSLATION	protein_coding	stop	-	-	108	11	2.731	0	56.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025068	Gsto1	ENSMUST00000237472	ENSMUSP00000158012	TRANSLATION	nonsense_mediated_decay	-	-	-	166	11	4.764	0	71.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000057503	Olfr1459	ENSMUST00000078299	ENSMUSP00000077414	TRANSLATION	protein_coding	-	CCDS29651.1	-	307	0	0	1.5	168.2	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000057503	Olfr1459	ENSMUST00000215405	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057503	Olfr1459	ENSMUST00000213493	ENSMUSP00000150886	TRANSLATION	protein_coding	-	CCDS29651.1	5	307	0	0	1.5	168.2	5	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024672	Ms4a7	ENSMUST00000159269	ENSMUSP00000124911	TRANSLATION	protein_coding	start	-	3	130	0	0	0	50.7	1	1,-3	-	-	-1	MINOR
ENSMUSG00000024672	Ms4a7	ENSMUST00000067532	ENSMUSP00000064534	TRANSLATION	protein_coding	-	CCDS29598.1	1	234	0	0	0.5	117.6	3	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000024672	Ms4a7	ENSMUST00000162785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024672	Ms4a7	ENSMUST00000056035	ENSMUSP00000054830	TRANSLATION	protein_coding	-	CCDS29597.1	1	215	0	0	0.5	53.6	2	-4,-5	-	-	2.16	MINOR
ENSMUSG00000024672	Ms4a7	ENSMUST00000025574	ENSMUSP00000025574	TRANSLATION	protein_coding	-	CCDS70935.1	1	267	0	0	0.5	117.6	3	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000053617	Sh3pxd2a	ENSMUST00000111800	ENSMUSP00000107430	TRANSLATION	protein_coding	-	CCDS50464.1	1	1096	0	7.116	1.5	213.8	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000053617	Sh3pxd2a	ENSMUST00000081619	ENSMUSP00000080325	TRANSLATION	protein_coding	-	CCDS29891.1	1	1124	0	7.116	1.5	213.8	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000053617	Sh3pxd2a	ENSMUST00000237796	ENSMUSP00000158543	TRANSLATION	protein_coding	-	-	-	991	0	3.4	0	140.5	0	-2,0	-	-	1.602	MINOR
ENSMUSG00000053617	Sh3pxd2a	ENSMUST00000237828	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025003	Cyp2c39	ENSMUST00000025968	ENSMUSP00000025968	TRANSLATION	protein_coding	-	CCDS29795.1	1	490	34	9	2.7	541.1	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000039982	Dtx4	ENSMUST00000045521	ENSMUSP00000040229	TRANSLATION	protein_coding	-	CCDS29631.1	1	616	8	5.13	4.1	157.2	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000217079	ENSMUSP00000148910	TRANSLATION	protein_coding	-	CCDS29675.1	-	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000214475	ENSMUSP00000151165	TRANSLATION	protein_coding	-	CCDS29675.1	5	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000216287	ENSMUSP00000149067	TRANSLATION	protein_coding	-	CCDS29675.1	5	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000215760	ENSMUSP00000149543	TRANSLATION	protein_coding	-	CCDS29675.1	5	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000067670	ENSMUSP00000067303	TRANSLATION	protein_coding	-	CCDS29675.1	5	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000054526	Olfr1500	ENSMUST00000214579	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054526	Olfr1500	ENSMUST00000219674	ENSMUSP00000151471	TRANSLATION	protein_coding	-	CCDS29675.1	5	311	0	0.16	6.3	161.4	6	-3,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000079339	Ifit1bl1	ENSMUST00000112467	ENSMUSP00000108086	TRANSLATION	protein_coding	-	CCDS50421.1	3	470	0	1.132	0.5	30.5	0	-4,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000079339	Ifit1bl1	ENSMUST00000168254	ENSMUSP00000132781	TRANSLATION	protein_coding	-	CCDS50422.1	2	470	0	1	0.5	30.5	0	-4,-5	-	-	11.298	ALTERNATIVE:2
ENSMUSG00000100621	Gm28374	ENSMUST00000162374	ENSMUSP00000124641	TRANSLATION	protein_coding,RT	-	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000091471	Gm20538	ENSMUST00000166808	ENSMUSP00000126763	TRANSLATION	protein_coding,RT	start/stop	-	3	75	0	1	0	42.4	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000024968	Rcor2	ENSMUST00000134167	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024968	Rcor2	ENSMUST00000140442	ENSMUSP00000114858	TRANSLATION	protein_coding	stop	-	3	76	0	1.06	0	27.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024968	Rcor2	ENSMUST00000113369	ENSMUSP00000108996	TRANSLATION	protein_coding	-	-	1	479	0	8.2	0	86	0	-4,-5	-	-	11.682	MINOR
ENSMUSG00000024968	Rcor2	ENSMUST00000066646	ENSMUSP00000063335	TRANSLATION	protein_coding	-	CCDS29522.2	1	523	0	8.36	7.5	86	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000039901	Armh3	ENSMUST00000235131	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039901	Armh3	ENSMUST00000236730	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039901	Armh3	ENSMUST00000045396	ENSMUSP00000048454	TRANSLATION	protein_coding	-	CCDS50454.1	5	689	0	0	17	282.8	0	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000024855	Pacs1	ENSMUST00000025786	ENSMUSP00000025786	TRANSLATION	protein_coding	-	CCDS29453.1	1	961	0	0	2.7	628	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000024855	Pacs1	ENSMUST00000237967	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024855	Pacs1	ENSMUST00000237463	ENSMUSP00000158335	TRANSLATION	protein_coding	stop	-	-	119	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024855	Pacs1	ENSMUST00000236624	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024855	Pacs1	ENSMUST00000236775	ENSMUSP00000158057	TRANSLATION	nonsense_mediated_decay	-	-	-	170	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024855	Pacs1	ENSMUST00000236470	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024855	Pacs1	ENSMUST00000235130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024997	Prdx3	ENSMUST00000025961	ENSMUSP00000025961	TRANSLATION	protein_coding	-	CCDS29944.1	1	257	0	4.5	6.3	177.1	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000025004	Cyp2c40	ENSMUST00000162434	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025004	Cyp2c40	ENSMUST00000239028	ENSMUSP00000158887	TRANSLATION	protein_coding	-	CCDS29798.2	-	520	31	10.3	0.5	503.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000025004	Cyp2c40	ENSMUST00000163090	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025004	Cyp2c40	ENSMUST00000162507	ENSMUSP00000124618	TRANSLATION	protein_coding	stop	-	5	120	5	2.55	0	42.6	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025004	Cyp2c40	ENSMUST00000162630	ENSMUSP00000123884	TRANSLATION	nonsense_mediated_decay	-	-	5	165	5	3.8	0	108.2	0	2,-3	-	-	-1	MINOR
ENSMUSG00000025004	Cyp2c40	ENSMUST00000160476	ENSMUSP00000125217	TRANSLATION	protein_coding	-	-	1	491	31	10.3	1.5	503.9	0	2,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000024727	Trpm6	ENSMUST00000040489	ENSMUSP00000037443	TRANSLATION	protein_coding	-	CCDS29691.1	1	2028	21	5.45	1.5	267	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000024727	Trpm6	ENSMUST00000237020	ENSMUSP00000158233	TRANSLATION	protein_coding	stop	-	-	525	0	0	0	64.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024727	Trpm6	ENSMUST00000236199	ENSMUSP00000157823	TRANSLATION	nonsense_mediated_decay	-	-	-	894	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024727	Trpm6	ENSMUST00000237623	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024847	Aip	ENSMUST00000127767	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024847	Aip	ENSMUST00000121402	ENSMUSP00000114096	TRANSLATION	protein_coding	stop	-	3	172	0	3.5	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024847	Aip	ENSMUST00000117831	ENSMUSP00000113807	TRANSLATION	protein_coding	-	CCDS29415.1	1	330	0	6.5	9.5	38.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024847	Aip	ENSMUST00000236509	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024847	Aip	ENSMUST00000025767	ENSMUSP00000025767	TRANSLATION	protein_coding	-	CCDS29415.1	1	330	0	6.5	9.5	38.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024847	Aip	ENSMUST00000136043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062456	Rpl9-ps6	ENSMUST00000078034	ENSMUSP00000127859	TRANSLATION	protein_coding	-	-	-	192	0	1	19.5	113.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000025194	Abcc2	ENSMUST00000129943	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025194	Abcc2	ENSMUST00000146737	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025194	Abcc2	ENSMUST00000026208	ENSMUSP00000026208	TRANSLATION	protein_coding	-	CCDS29838.1	1	1543	23	21.93	1.5	448.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000025194	Abcc2	ENSMUST00000143553	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025194	Abcc2	ENSMUST00000099413	ENSMUSP00000097010	TRANSLATION	protein_coding	-	-	-	44	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000131083	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024949	Sf1	ENSMUST00000154260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024949	Sf1	ENSMUST00000113489	ENSMUSP00000109117	TRANSLATION	protein_coding	-	-	5	571	4	6.41	6.3	203.3	0	-4,-6	-	-	18	ALTERNATIVE:1
ENSMUSG00000024949	Sf1	ENSMUST00000125516	ENSMUSP00000117172	TRANSLATION	protein_coding	start	-	3	225	1	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000162237	ENSMUSP00000124590	TRANSLATION	protein_coding	start/stop	-	5	171	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000113488	ENSMUSP00000109116	TRANSLATION	protein_coding	-	-	5	638	5	6.41	6.3	203.3	0	-4,-6	-	-	19	ALTERNATIVE:1
ENSMUSG00000024949	Sf1	ENSMUST00000131252	ENSMUSP00000121309	TRANSLATION	protein_coding	-	CCDS50368.1	1	639	5	6.41	6.3	203.3	0	-4,-6	-	-	19	PRINCIPAL:4
ENSMUSG00000024949	Sf1	ENSMUST00000155973	ENSMUSP00000114438	TRANSLATION	protein_coding	stop	-	5	267	4	5.58	0	195.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000144239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024949	Sf1	ENSMUST00000124667	ENSMUSP00000114788	TRANSLATION	protein_coding	start	-	5	200	1	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000146298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024949	Sf1	ENSMUST00000113485	ENSMUSP00000109113	TRANSLATION	nonsense_mediated_decay	-	-	1	110	0	1.74	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000131677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024949	Sf1	ENSMUST00000144409	ENSMUSP00000123175	TRANSLATION	nonsense_mediated_decay	-	-	3	84	0	0.91	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024949	Sf1	ENSMUST00000113487	ENSMUSP00000109115	TRANSLATION	protein_coding	-	CCDS50369.1	1	548	5	6.41	6.3	203.3	0	-4,-6	-	-	19	ALTERNATIVE:1
ENSMUSG00000024781	Lipa	ENSMUST00000049572	ENSMUSP00000053270	TRANSLATION	protein_coding	-	CCDS29760.1	1	397	6	7.7	1.5	103.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000024781	Lipa	ENSMUST00000236641	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024781	Lipa	ENSMUST00000237513	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024781	Lipa	ENSMUST00000237497	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024781	Lipa	ENSMUST00000237617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024781	Lipa	ENSMUST00000178114	ENSMUSP00000136967	TRANSLATION	protein_coding	-	CCDS29760.1	1	397	6	7.7	1.5	103.2	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000009378	Slc16a12	ENSMUST00000009522	ENSMUSP00000009522	TRANSLATION	protein_coding	-	CCDS29767.1	1	486	0	0	3.9	130.1	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000009378	Slc16a12	ENSMUST00000235650	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071647	Eml3	ENSMUST00000226096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071647	Eml3	ENSMUST00000096241	ENSMUSP00000093960	TRANSLATION	protein_coding	-	CCDS29560.1	1	897	0	14.56	1.5	175.3	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000071647	Eml3	ENSMUST00000225377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071647	Eml3	ENSMUST00000225054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071647	Eml3	ENSMUST00000224272	ENSMUSP00000153500	TRANSLATION	protein_coding	-	-	-	896	0	14.56	1.5	175.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000071647	Eml3	ENSMUST00000224642	ENSMUSP00000153061	TRANSLATION	protein_coding	start/stop	-	-	200	0	3.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024677	Ms4a6b	ENSMUST00000163078	ENSMUSP00000124685	TRANSLATION	protein_coding	-	CCDS29601.1	5	244	0	0	0.5	140.4	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024677	Ms4a6b	ENSMUST00000025580	ENSMUSP00000025580	TRANSLATION	protein_coding	-	CCDS29601.1	1	244	0	0	0.5	140.4	4	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000024677	Ms4a6b	ENSMUST00000161283	ENSMUSP00000124277	TRANSLATION	nonsense_mediated_decay	start	-	5	83	3	0	0	67.6	1	1,-3	-	-	-1	MINOR
ENSMUSG00000024677	Ms4a6b	ENSMUST00000161157	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024677	Ms4a6b	ENSMUST00000159587	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071691	Gm960	ENSMUST00000223788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071691	Gm960	ENSMUST00000226012	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071691	Gm960	ENSMUST00000096325	ENSMUSP00000094049	TRANSLATION	nonsense_mediated_decay	-	-	2	162	0	0	0	65	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000071691	Gm960	ENSMUST00000177696	ENSMUSP00000136515	TRANSLATION	protein_coding	-	CCDS57129.1	5	753	0	0	0.5	747.2	0	-4,-2	-	-	3.822	MINOR
ENSMUSG00000071691	Gm960	ENSMUST00000225896	ENSMUSP00000153439	TRANSLATION	protein_coding	-	-	-	579	0	0	0	783.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000024759	Atl3	ENSMUST00000235557	ENSMUSP00000157731	TRANSLATION	protein_coding	stop	-	-	58	0	0.8	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024759	Atl3	ENSMUST00000170373	ENSMUSP00000132619	TRANSLATION	protein_coding	-	CCDS50379.1	5	536	23	10.3	1.5	349.7	2	-4,-5	-	-	18.231	MINOR
ENSMUSG00000024759	Atl3	ENSMUST00000236308	ENSMUSP00000158179	TRANSLATION	protein_coding	-	-	-	232	18	4.69	0	177.3	0	-4,-5	-	-	2.664	MINOR
ENSMUSG00000024759	Atl3	ENSMUST00000235260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024759	Atl3	ENSMUST00000025668	ENSMUSP00000025668	TRANSLATION	protein_coding	-	CCDS29527.1	1	541	23	10.3	7.5	349.7	2	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000024759	Atl3	ENSMUST00000237998	ENSMUSP00000158217	TRANSLATION	protein_coding	stop	-	-	100	0	1.55	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024759	Atl3	ENSMUST00000236382	ENSMUSP00000158227	TRANSLATION	nonsense_mediated_decay	start	-	-	323	23	7.05	0	297.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024942	Capn1	ENSMUST00000237519	ENSMUSP00000158205	TRANSLATION	protein_coding	stop	-	-	196	4	4.33	0	210.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024942	Capn1	ENSMUST00000164843	ENSMUSP00000127498	TRANSLATION	protein_coding	-	CCDS37893.1	5	713	28	16.924	10.3	647.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024942	Capn1	ENSMUST00000025891	ENSMUSP00000025891	TRANSLATION	protein_coding	-	CCDS37893.1	1	713	28	16.924	10.3	647.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024942	Capn1	ENSMUST00000236537	ENSMUSP00000158309	TRANSLATION	protein_coding	stop	-	-	79	3	2.25	0	129	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024942	Capn1	ENSMUST00000235138	ENSMUSP00000157973	TRANSLATION	protein_coding	stop	-	-	79	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024942	Capn1	ENSMUST00000236798	ENSMUSP00000158393	TRANSLATION	protein_coding	stop	-	-	699	28	16.33	0	647.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024750	Zfand5	ENSMUST00000133175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024750	Zfand5	ENSMUST00000141568	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024750	Zfand5	ENSMUST00000025659	ENSMUSP00000025659	TRANSLATION	protein_coding	-	CCDS29697.1	1	213	12	3.75	17	85.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024750	Zfand5	ENSMUST00000237651	ENSMUSP00000158187	TRANSLATION	protein_coding	-	CCDS29697.1	-	213	12	3.75	17	85.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024750	Zfand5	ENSMUST00000149144	ENSMUSP00000122782	TRANSLATION	nonsense_mediated_decay	-	-	3	104	4	1.6	0	47.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050865	Olfr1494	ENSMUST00000207836	ENSMUSP00000146563	TRANSLATION	protein_coding	-	CCDS29670.1	3	315	0	0.42	1.5	179.4	7	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050865	Olfr1494	ENSMUST00000051768	ENSMUSP00000056291	TRANSLATION	protein_coding	-	CCDS29670.1	-	315	0	0.42	1.5	179.4	7	-3,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050865	Olfr1494	ENSMUST00000214479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050865	Olfr1494	ENSMUST00000214697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033610	Pank1	ENSMUST00000036584	ENSMUSP00000043562	TRANSLATION	protein_coding	-	CCDS50424.1	1	548	32	5.5	1.5	401	0	-4,-1	-	-	18.16	MINOR
ENSMUSG00000033610	Pank1	ENSMUST00000112460	ENSMUSP00000108079	TRANSLATION	protein_coding	-	CCDS37966.1	1	373	32	5.5	13.5	401	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000033610	Pank1	ENSMUST00000237577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033610	Pank1	ENSMUST00000238065	ENSMUSP00000157555	TRANSLATION	protein_coding	-	-	-	251	27	4.5	2.2	321.1	0	-4,-5	-	-	8.256	MINOR
ENSMUSG00000025010	Ccnj	ENSMUST00000025983	ENSMUSP00000025983	TRANSLATION	protein_coding	-	CCDS29806.1	1	379	0	1.99	7.5	136.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000025010	Ccnj	ENSMUST00000119316	ENSMUSP00000112643	TRANSLATION	protein_coding	-	CCDS29806.1	5	379	0	1.99	7.5	136.9	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000037578	Pkd2l1	ENSMUST00000161357	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037578	Pkd2l1	ENSMUST00000042026	ENSMUSP00000045675	TRANSLATION	protein_coding	-	CCDS29846.1	1	760	4	12	0.5	567.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000062314	Olfr1505	ENSMUST00000216623	ENSMUSP00000150484	TRANSLATION	protein_coding	-	CCDS29679.1	5	316	0	0	3.9	145.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000062314	Olfr1505	ENSMUST00000081520	ENSMUSP00000080235	TRANSLATION	protein_coding	-	CCDS29679.1	-	316	0	0	3.9	145.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000062314	Olfr1505	ENSMUST00000216835	ENSMUSP00000148945	TRANSLATION	protein_coding	-	CCDS29679.1	5	316	0	0	3.9	145.2	7	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000041491	Cep78	ENSMUST00000235718	ENSMUSP00000157915	TRANSLATION	nonsense_mediated_decay	-	-	-	614	0	3.39	0.5	40.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041491	Cep78	ENSMUST00000047704	ENSMUSP00000037596	TRANSLATION	protein_coding	-	CCDS29682.1	1	790	0	3.39	1.5	40.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041491	Cep78	ENSMUST00000236749	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024935	Slc1a1	ENSMUST00000025875	ENSMUSP00000025875	TRANSLATION	protein_coding	-	CCDS29727.1	1	523	13	9.38	5.1	448.7	0	-2,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000024935	Slc1a1	ENSMUST00000161119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024935	Slc1a1	ENSMUST00000161340	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024935	Slc1a1	ENSMUST00000160702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024935	Slc1a1	ENSMUST00000162189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024935	Slc1a1	ENSMUST00000237545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036097	Slf2	ENSMUST00000096053	ENSMUSP00000093758	TRANSLATION	protein_coding	-	CCDS37999.1	1	1163	3	0	1.5	480.3	0	-4,0	-	-	9	PRINCIPAL:1
ENSMUSG00000036097	Slf2	ENSMUST00000236895	ENSMUSP00000157598	TRANSLATION	nonsense_mediated_decay	-	-	-	687	3	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000036097	Slf2	ENSMUST00000236057	ENSMUSP00000158409	TRANSLATION	protein_coding	-	-	-	546	0	0	0	480.3	0	-4,-2	-	-	6	MINOR
ENSMUSG00000036097	Slf2	ENSMUST00000236356	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036097	Slf2	ENSMUST00000237505	ENSMUSP00000158404	TRANSLATION	protein_coding	-	-	-	518	0	0	2.9	480.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000040414	Slc25a28	ENSMUST00000235953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040414	Slc25a28	ENSMUST00000236286	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040414	Slc25a28	ENSMUST00000237364	ENSMUSP00000157953	TRANSLATION	nonsense_mediated_decay	start	-	-	83	0	0.42	0	35.7	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040414	Slc25a28	ENSMUST00000046038	ENSMUSP00000036913	TRANSLATION	protein_coding	-	CCDS29834.1	1	364	0	1.32	8.8	205	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000040414	Slc25a28	ENSMUST00000236433	ENSMUSP00000158028	TRANSLATION	protein_coding	-	-	-	111	0	0.2	0	23.2	0	-4,-5	-	-	0.912	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000160028	ENSMUSP00000124847	TRANSLATION	protein_coding	stop	-	3	61	0	0	0	0	1	2,-2	-	-	-1	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000236413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024799	Tm7sf2	ENSMUST00000162549	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024799	Tm7sf2	ENSMUST00000162721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024799	Tm7sf2	ENSMUST00000159084	ENSMUSP00000124868	TRANSLATION	protein_coding	-	-	5	391	0	7.294	0	396.2	12	-2,-3	-	-	6.528	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000161718	ENSMUSP00000124283	TRANSLATION	protein_coding	stop	-	5	197	0	4.63	0	278.2	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000161528	ENSMUSP00000123989	TRANSLATION	protein_coding	-	-	1	110	0	0.8	0	25.1	2	-2,-3	-	-	0	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000161090	ENSMUSP00000125543	TRANSLATION	nonsense_mediated_decay	-	-	5	89	0	0.3	0	0	2	-2,-3	-	-	-1	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000162575	ENSMUSP00000125586	TRANSLATION	protein_coding	stop	-	5	229	0	3.1	0	189.3	7	-2,-3	-	-	-1	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000160417	ENSMUSP00000158473	TRANSLATION	protein_coding	-	-	1	91	0	1.864	0	83.3	3	1,-3	-	-	0	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000025713	ENSMUSP00000025713	TRANSLATION	protein_coding	-	CCDS29490.2	1	418	0	8.044	2.7	462.4	13	-2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000024799	Tm7sf2	ENSMUST00000160354	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024799	Tm7sf2	ENSMUST00000113543	ENSMUSP00000109171	TRANSLATION	protein_coding	-	-	1	399	0	6.214	0	363.1	13	-2,-3	-	-	2.382	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000162810	ENSMUSP00000124825	TRANSLATION	protein_coding	stop	-	3	124	0	2.664	0	107.5	5	1,-3	-	-	-1	MINOR
ENSMUSG00000024799	Tm7sf2	ENSMUST00000159836	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042532	Golga7b	ENSMUST00000087123	ENSMUSP00000084362	TRANSLATION	protein_coding	-	CCDS29827.1	1	167	0	0	3.9	116.3	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000042532	Golga7b	ENSMUST00000122375	ENSMUSP00000112575	TRANSLATION	protein_coding	-	CCDS29827.1	1	167	0	0	3.9	116.3	0	-4,-6	-	-	7	PRINCIPAL:1
ENSMUSG00000024827	Gldc	ENSMUST00000235189	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024827	Gldc	ENSMUST00000235203	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024827	Gldc	ENSMUST00000025778	ENSMUSP00000025778	TRANSLATION	protein_coding	-	CCDS37956.1	1	1025	12	21.325	2.7	704	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000034659	Tmem109	ENSMUST00000138897	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034659	Tmem109	ENSMUST00000133303	ENSMUSP00000120261	TRANSLATION	protein_coding	stop	-	3	213	0	0	0	148.1	6	3,-1	-	-	-1	MINOR
ENSMUSG00000034659	Tmem109	ENSMUST00000151355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034659	Tmem109	ENSMUST00000129052	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034659	Tmem109	ENSMUST00000128835	ENSMUSP00000122130	TRANSLATION	protein_coding	stop	-	3	73	0	0	0	0	0	3,-1	-	-	-1	MINOR
ENSMUSG00000034659	Tmem109	ENSMUST00000144681	ENSMUSP00000116750	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	0	0	0,2	-	-	-1	MINOR
ENSMUSG00000034659	Tmem109	ENSMUST00000038128	ENSMUSP00000039529	TRANSLATION	protein_coding	-	CCDS29590.1	1	243	0	0	3.9	179.4	6	3,-1	-	-	7	PRINCIPAL:1
ENSMUSG00000034659	Tmem109	ENSMUST00000147699	ENSMUSP00000120662	TRANSLATION	protein_coding	-	-	2	115	0	0	0	41	2	3,-1	-	-	0	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000236297	ENSMUSP00000158525	TRANSLATION	protein_coding	stop	-	-	226	0	3.71	0	32.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000236773	ENSMUSP00000158420	TRANSLATION	protein_coding	stop	-	-	775	0	7.2292	0	50.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000235698	ENSMUSP00000157655	TRANSLATION	nonsense_mediated_decay	start	-	-	39	0	0.5292	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000238178	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024941	Scyl1	ENSMUST00000235599	ENSMUSP00000158013	TRANSLATION	nonsense_mediated_decay	-	-	-	749	0	7.2292	0	50.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000236568	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024941	Scyl1	ENSMUST00000236275	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024941	Scyl1	ENSMUST00000237453	ENSMUSP00000157546	TRANSLATION	protein_coding	start/stop	-	-	195	0	1.44	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000025890	ENSMUSP00000025890	TRANSLATION	protein_coding	-	-	1	789	0	7.2292	0.5	50.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000024941	Scyl1	ENSMUST00000235561	ENSMUSP00000158016	TRANSLATION	protein_coding	stop	-	-	48	0	0.948	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024941	Scyl1	ENSMUST00000237133	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024941	Scyl1	ENSMUST00000236978	ENSMUSP00000157476	TRANSLATION	protein_coding	-	CCDS29480.1	-	806	0	7.2292	1.5	50.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000024941	Scyl1	ENSMUST00000235615	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040018	Cox15	ENSMUST00000045562	ENSMUSP00000041820	TRANSLATION	protein_coding	-	CCDS29836.1	1	413	0	0	5.2	368.5	0	-4,0	-	-	8	PRINCIPAL:1
ENSMUSG00000040018	Cox15	ENSMUST00000129242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025091	Pnliprp2	ENSMUST00000026081	ENSMUSP00000026081	TRANSLATION	protein_coding	-	CCDS38030.1	1	482	13	10.75	1.5	599.8	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000094133	Olfr1431	ENSMUST00000214138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094133	Olfr1431	ENSMUST00000072316	ENSMUSP00000072158	TRANSLATION	protein_coding	-	CCDS29624.1	-	312	0	0	7.5	187.8	5	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000094133	Olfr1431	ENSMUST00000213759	ENSMUSP00000150967	TRANSLATION	protein_coding	-	CCDS29624.1	5	312	0	0	7.5	187.8	5	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000003680	Taf6l	ENSMUST00000176719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000003680	Taf6l	ENSMUST00000176688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003680	Taf6l	ENSMUST00000176496	ENSMUSP00000135090	TRANSLATION	protein_coding	-	CCDS57134.1	1	598	0	4.54	0.5	163.1	0	-4,-7	-	-	10.8	MINOR
ENSMUSG00000003680	Taf6l	ENSMUST00000176991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003680	Taf6l	ENSMUST00000176080	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003680	Taf6l	ENSMUST00000176331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003680	Taf6l	ENSMUST00000176747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000003680	Taf6l	ENSMUST00000177216	ENSMUSP00000135220	TRANSLATION	protein_coding	-	CCDS29546.2	5	623	0	5.14	3.9	163.1	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000003680	Taf6l	ENSMUST00000177056	ENSMUSP00000135028	TRANSLATION	protein_coding	-	-	5	616	0	5.14	1.2	163.1	0	-4,-5	-	-	12.069	ALTERNATIVE:2
ENSMUSG00000003680	Taf6l	ENSMUST00000176610	ENSMUSP00000135193	TRANSLATION	protein_coding	-	CCDS29546.2	1	623	0	5.14	3.9	163.1	0	-4,-7	-	-	13	PRINCIPAL:2
ENSMUSG00000003680	Taf6l	ENSMUST00000189739	ENSMUSP00000140136	TRANSLATION	protein_coding	start	-	5	597	0	4.54	0.5	163.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000003680	Taf6l	ENSMUST00000003777	ENSMUSP00000003777	TRANSLATION	protein_coding	start	-	5	622	0	5.14	3.9	163.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024829	Mrpl21	ENSMUST00000141610	ENSMUSP00000120330	TRANSLATION	nonsense_mediated_decay	-	-	3	53	0	1.5	0	0	0	-2,2	-	-	-1	MINOR
ENSMUSG00000024829	Mrpl21	ENSMUST00000155870	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024829	Mrpl21	ENSMUST00000025743	ENSMUSP00000025743	TRANSLATION	protein_coding	-	CCDS84406.1	1	209	0	5.5	2.7	82.1	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000024829	Mrpl21	ENSMUST00000025745	ENSMUSP00000025745	TRANSLATION	protein_coding	-	CCDS29394.1	1	216	0	4.87	0.5	72.4	0	-2,2	-	-	10.032	MINOR
ENSMUSG00000024829	Mrpl21	ENSMUST00000139844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024829	Mrpl21	ENSMUST00000154785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000134479	ENSMUSP00000121915	TRANSLATION	protein_coding	-	-	5	385	27	8.99	0	273.9	0	-4,-7	-	-	13.338	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000128787	ENSMUSP00000123069	TRANSLATION	protein_coding	-	-	5	455	27	10.99	0	273.9	0	-4,-1	-	-	17.34	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000042497	ENSMUSP00000042967	TRANSLATION	protein_coding	-	CCDS29410.1	1	464	27	11.32	3.9	273.9	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000037916	Ndufv1	ENSMUST00000132747	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000133474	ENSMUSP00000120223	TRANSLATION	protein_coding	stop	-	3	146	14	4.16	0	153.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000237862	ENSMUSP00000157713	TRANSLATION	protein_coding	-	-	-	385	27	8.99	0	273.9	0	-4,-7	-	-	13.338	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000236203	ENSMUSP00000158219	TRANSLATION	protein_coding	stop	-	-	128	3	3.41	0	76.1	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000129706	ENSMUSP00000115653	TRANSLATION	nonsense_mediated_decay	-	-	3	120	6	3.528	0	28.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000136921	ENSMUSP00000123680	TRANSLATION	protein_coding	stop	-	3	115	9	3.16	0	116.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037916	Ndufv1	ENSMUST00000149482	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000134049	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000150852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000148283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037916	Ndufv1	ENSMUST00000237129	ENSMUSP00000157826	TRANSLATION	nonsense_mediated_decay	-	-	-	41	6	1.198	0	32.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000074922	Fam122a	ENSMUST00000099556	ENSMUSP00000097152	TRANSLATION	protein_coding	-	CCDS29712.1	-	284	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000024642	Tle4	ENSMUST00000167776	ENSMUSP00000126249	TRANSLATION	protein_coding	-	-	5	773	0	11.3	12.5	272.3	0	-4,-2	-	-	16	ALTERNATIVE:1
ENSMUSG00000024642	Tle4	ENSMUST00000052011	ENSMUSP00000057527	TRANSLATION	protein_coding	-	CCDS50399.1	1	773	0	11.3	12.5	272.3	0	-4,-2	-	-	16	PRINCIPAL:2
ENSMUSG00000024642	Tle4	ENSMUST00000235975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000074909	Ranbp6	ENSMUST00000235906	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000074909	Ranbp6	ENSMUST00000099525	ENSMUSP00000100503	TRANSLATION	protein_coding	-	CCDS37954.1	-	1105	0	0.48	7.5	52.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000024973	Plaat5	ENSMUST00000025929	ENSMUSP00000025929	TRANSLATION	protein_coding	-	-	1	270	0	1.8	0	121	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000024973	Plaat5	ENSMUST00000239394	ENSMUSP00000159309	TRANSLATION	protein_coding	-	CCDS29530.1	-	294	0	1.8	1.5	121	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000024973	Plaat5	ENSMUST00000131326	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024973	Plaat5	ENSMUST00000148558	ENSMUSP00000118096	TRANSLATION	protein_coding	stop	-	1	316	0	1.8	0	121	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000045052	Prlhr	ENSMUST00000051277	ENSMUSP00000063114	TRANSLATION	protein_coding	-	CCDS29940.1	-	370	0	0.6	2.7	177.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049015	Olfr1467	ENSMUST00000054687	ENSMUSP00000061580	TRANSLATION	protein_coding	-	CCDS29657.1	-	308	0	0.16	2.7	161.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049015	Olfr1467	ENSMUST00000215096	ENSMUSP00000149487	TRANSLATION	protein_coding	-	CCDS29657.1	5	308	0	0.16	2.7	161.9	6	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000024858	Grk2	ENSMUST00000168594	ENSMUSP00000126025	TRANSLATION	protein_coding	start/stop	-	5	87	0	2.25	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024858	Grk2	ENSMUST00000235681	ENSMUSP00000157639	TRANSLATION	nonsense_mediated_decay	start	-	-	26	0	0.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024858	Grk2	ENSMUST00000113837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024858	Grk2	ENSMUST00000165954	ENSMUSP00000128177	TRANSLATION	protein_coding	start/stop	-	3	208	13	6.33	0	152	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024858	Grk2	ENSMUST00000025791	ENSMUSP00000025791	TRANSLATION	protein_coding	-	CCDS29426.1	1	647	24	18.74	6.9	342.8	0	-4,-5	-	-	17.554	MINOR
ENSMUSG00000024858	Grk2	ENSMUST00000167511	ENSMUSP00000129839	TRANSLATION	protein_coding	stop	-	3	110	0	2.25	0	29.9	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000024858	Grk2	ENSMUST00000088737	ENSMUSP00000086114	TRANSLATION	protein_coding	-	CCDS70915.1	1	689	24	19.74	16.2	342.8	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000024858	Grk2	ENSMUST00000169991	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024858	Grk2	ENSMUST00000164427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024640	Psat1	ENSMUST00000162233	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024640	Psat1	ENSMUST00000161707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024640	Psat1	ENSMUST00000162416	ENSMUSP00000125593	TRANSLATION	protein_coding	stop	-	5	157	11	3.08	0	110.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024640	Psat1	ENSMUST00000025542	ENSMUSP00000025542	TRANSLATION	protein_coding	-	CCDS29681.1	1	370	17	8.58	10.6	242.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000024640	Psat1	ENSMUST00000159264	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024640	Psat1	ENSMUST00000160170	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024640	Psat1	ENSMUST00000162053	ENSMUSP00000125340	TRANSLATION	protein_coding	-	CCDS57139.1	1	367	17	7.99	0.5	227.8	0	-4,-7	-	-	15.936	MINOR
ENSMUSG00000024939	Fam89b	ENSMUST00000161368	ENSMUSP00000124294	TRANSLATION	protein_coding	-	CCDS50361.1	1	176	0	0	1.7	0	0	-4,-5	-	-	0.264	MINOR
ENSMUSG00000024939	Fam89b	ENSMUST00000099955	ENSMUSP00000097538	TRANSLATION	protein_coding	-	CCDS37890.1	1	189	0	0	6.3	27.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000024939	Fam89b	ENSMUST00000116558	ENSMUSP00000112257	TRANSLATION	protein_coding	-	-	1	149	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000127809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024948	Map4k2	ENSMUST00000155655	ENSMUSP00000158007	TRANSLATION	nonsense_mediated_decay	start	-	1	70	0	0	0	58.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000236640	ENSMUSP00000158086	TRANSLATION	nonsense_mediated_decay	start	-	-	138	0	0	0	46.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000149624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024948	Map4k2	ENSMUST00000154900	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000137095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000123468	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000025897	ENSMUSP00000025897	TRANSLATION	protein_coding	-	CCDS29503.1	1	821	18	11.028	5.1	416.6	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000024948	Map4k2	ENSMUST00000130382	ENSMUSP00000120123	TRANSLATION	protein_coding	stop	-	5	351	18	10.028	0	146.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000152912	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000126841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000155569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024948	Map4k2	ENSMUST00000142496	ENSMUSP00000114243	TRANSLATION	nonsense_mediated_decay	-	-	5	57	8	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000148410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000124556	ENSMUSP00000121375	TRANSLATION	nonsense_mediated_decay	-	-	1	57	8	1.75	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000133696	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000152349	ENSMUSP00000115741	TRANSLATION	nonsense_mediated_decay	-	-	3	58	8	2.014	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000128170	ENSMUSP00000121856	TRANSLATION	nonsense_mediated_decay	start	-	5	142	0	0	0	60.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024948	Map4k2	ENSMUST00000124333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000134307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000152259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024948	Map4k2	ENSMUST00000142862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024948	Map4k2	ENSMUST00000140098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025188	Hps1	ENSMUST00000161761	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025188	Hps1	ENSMUST00000026194	ENSMUSP00000026194	TRANSLATION	protein_coding	-	CCDS37992.1	5	704	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000025188	Hps1	ENSMUST00000162061	ENSMUSP00000124209	TRANSLATION	protein_coding	-	-	1	627	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000025188	Hps1	ENSMUST00000160621	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025188	Hps1	ENSMUST00000161252	ENSMUSP00000125483	TRANSLATION	nonsense_mediated_decay	start	-	1	24	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025188	Hps1	ENSMUST00000069298	ENSMUSP00000071069	TRANSLATION	protein_coding	-	-	1	635	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000025188	Hps1	ENSMUST00000159974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025188	Hps1	ENSMUST00000160455	ENSMUSP00000125662	TRANSLATION	protein_coding	-	CCDS84439.1	1	712	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000025188	Hps1	ENSMUST00000162004	ENSMUSP00000125226	TRANSLATION	protein_coding	-	CCDS37992.1	1	704	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:3
ENSMUSG00000033863	Klf9	ENSMUST00000036884	ENSMUSP00000045639	TRANSLATION	protein_coding	-	CCDS29706.1	1	244	12	1.2	7.6	67.2	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000033863	Klf9	ENSMUST00000236357	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024866	Acy3	ENSMUST00000237910	ENSMUSP00000158203	TRANSLATION	protein_coding	stop	-	-	98	6	1.5	0	88	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024866	Acy3	ENSMUST00000054030	ENSMUSP00000050056	TRANSLATION	protein_coding	-	CCDS29406.1	1	318	11	6.5	1.5	251.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024866	Acy3	ENSMUST00000236224	ENSMUSP00000157563	TRANSLATION	protein_coding	stop	-	-	174	8	3.5	0	147.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000024866	Acy3	ENSMUST00000235592	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024866	Acy3	ENSMUST00000236739	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000024866	Acy3	ENSMUST00000235612	ENSMUSP00000158093	TRANSLATION	protein_coding	-	CCDS29406.1	-	318	11	6.5	1.5	251.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024866	Acy3	ENSMUST00000236510	ENSMUSP00000158512	TRANSLATION	protein_coding	-	CCDS29406.1	-	318	11	6.5	1.5	251.5	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000024911	Fibp	ENSMUST00000237181	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000224005	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000238011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000225917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000225141	ENSMUSP00000153409	TRANSLATION	protein_coding	-	-	-	357	0	0	15.5	568.2	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000024911	Fibp	ENSMUST00000226017	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000224944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000237258	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000224422	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000225222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000235533	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000225796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000024911	Fibp	ENSMUST00000025847	ENSMUSP00000025847	TRANSLATION	protein_coding	-	CCDS57130.1	1	364	0	0	5.1	561.7	0	-4,-5	-	-	6.742	MINOR
ENSMUSG00000025008	Tctn3	ENSMUST00000025981	ENSMUSP00000025981	TRANSLATION	protein_coding	-	CCDS29804.1	1	595	0	0	0.5	274.3	0	3,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000025008	Tctn3	ENSMUST00000132452	ENSMUSP00000121760	TRANSLATION	protein_coding	-	-	1	393	0	0	0	244.3	0	3,-2	-	-	4.2	MINOR
ENSMUSG00000025008	Tctn3	ENSMUST00000135795	ENSMUSP00000123461	TRANSLATION	protein_coding	-	-	1	492	0	0	0	274.3	0	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000025008	Tctn3	ENSMUST00000144566	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096365	Olfr1463	ENSMUST00000207246	ENSMUSP00000146566	TRANSLATION	protein_coding	-	CCDS29654.1	2	310	0	0.2	1.5	174.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096365	Olfr1463	ENSMUST00000064102	ENSMUSP00000070872	TRANSLATION	protein_coding	-	CCDS29654.1	-	310	0	0.2	1.5	174.4	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094649	Gm7102	ENSMUST00000180168	ENSMUSP00000137574	TRANSLATION	protein_coding	-	CCDS57149.1	-	178	0	0	0.5	74.5	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000039148	Sart1	ENSMUST00000235855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039148	Sart1	ENSMUST00000237915	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039148	Sart1	ENSMUST00000236511	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039148	Sart1	ENSMUST00000235654	ENSMUSP00000157615	TRANSLATION	protein_coding	stop	-	-	113	0	0	0	48.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039148	Sart1	ENSMUST00000235908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039148	Sart1	ENSMUST00000044207	ENSMUSP00000047397	TRANSLATION	protein_coding	-	CCDS29460.1	1	806	0	0	3.9	497	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000046324	Ermp1	ENSMUST00000054083	ENSMUSP00000057069	TRANSLATION	nonsense_mediated_decay	start	-	5	170	1	0.6	0	0	0	0,-3	-	-	-1	MINOR
ENSMUSG00000046324	Ermp1	ENSMUST00000159692	ENSMUSP00000124881	TRANSLATION	protein_coding	-	CCDS37952.1	1	898	6	2.26	1.5	160.3	8	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000046324	Ermp1	ENSMUST00000161749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046324	Ermp1	ENSMUST00000161124	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046324	Ermp1	ENSMUST00000160907	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046324	Ermp1	ENSMUST00000160125	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046324	Ermp1	ENSMUST00000159243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046324	Ermp1	ENSMUST00000162534	ENSMUSP00000124992	TRANSLATION	nonsense_mediated_decay	start	-	5	417	6	2.26	0	153.1	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000057615	Ldoc1	ENSMUST00000075983	ENSMUSP00000075366	TRANSLATION	protein_coding	-	CCDS30163.1	-	151	0	0	0.5	172.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000082482	H2ab2	ENSMUST00000118616	ENSMUSP00000138278	TRANSLATION	protein_coding	-	CCDS59772.1	-	115	0	0.8	1.5	0	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000016427	Ndufa1	ENSMUST00000016571	ENSMUSP00000016571	TRANSLATION	protein_coding	-	CCDS40928.1	1	70	0	2.33	18.2	77.8	0	1,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000009995	Taz	ENSMUST00000131116	ENSMUSP00000117206	TRANSLATION	protein_coding	start	-	5	134	0	0	0	38.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000153459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000114180	ENSMUSP00000109818	TRANSLATION	protein_coding	-	CCDS53107.1	5	263	2	0	9.5	140	1	0,-3	-	-	10.526	ALTERNATIVE:1
ENSMUSG00000009995	Taz	ENSMUST00000156880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000147844	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000132437	ENSMUSP00000135308	TRANSLATION	protein_coding	-	CCDS72400.1	3	175	2	0	0.5	68.4	1	0,-3	-	-	3.23	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000124915	ENSMUSP00000121031	TRANSLATION	nonsense_mediated_decay	start	-	5	64	0	0	0	69.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000134914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000149055	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000156212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000069722	ENSMUSP00000065270	TRANSLATION	protein_coding	-	CCDS30224.1	1	262	2	0	9.5	147.9	1	0,-3	-	-	11	PRINCIPAL:3
ENSMUSG00000009995	Taz	ENSMUST00000156072	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000135012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009995	Taz	ENSMUST00000176453	ENSMUSP00000135013	TRANSLATION	protein_coding	start/stop	-	1	148	0	0	0	93	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000156788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000124200	ENSMUSP00000134745	TRANSLATION	protein_coding	-	CCDS57764.1	1	201	2	0	0.5	147.9	1	0,-3	-	-	8	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000135504	ENSMUSP00000114496	TRANSLATION	protein_coding	-	-	5	248	2	0	2.4	105.7	1	0,-3	-	-	5.963	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000146260	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009995	Taz	ENSMUST00000114182	ENSMUSP00000135593	TRANSLATION	protein_coding	start	-	3	178	2	0	0	140	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000134432	ENSMUSP00000115153	TRANSLATION	nonsense_mediated_decay	start	-	3	21	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000009995	Taz	ENSMUST00000134936	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009995	Taz	ENSMUST00000125972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067924	Rtl8b	ENSMUST00000088778	ENSMUSP00000086157	TRANSLATION	protein_coding	-	CCDS30135.1	-	113	0	0	3.9	182.9	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000079642	Gm6268	ENSMUST00000115253	ENSMUSP00000110908	TRANSLATION	protein_coding	-	-	5	297	0	0	0	156.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079641	Rpl39	ENSMUST00000131149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079641	Rpl39	ENSMUST00000115231	ENSMUSP00000110886	TRANSLATION	protein_coding	-	CCDS40927.1	1	51	0	1.5	19.5	0	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000079641	Rpl39	ENSMUST00000138799	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043549	Fam90a1b	ENSMUST00000113902	ENSMUSP00000109535	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043549	Fam90a1b	ENSMUST00000113903	ENSMUSP00000109536	TRANSLATION	protein_coding	-	-	1	419	4	0.16	0	73.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043549	Fam90a1b	ENSMUST00000044989	ENSMUSP00000043958	TRANSLATION	protein_coding	-	-	1	419	4	0.16	0	73.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031099	Smarca1	ENSMUST00000153548	ENSMUSP00000114296	TRANSLATION	protein_coding	stop	-	5	768	8	13.056	0	337.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031099	Smarca1	ENSMUST00000153587	ENSMUSP00000116209	TRANSLATION	protein_coding	stop	-	3	117	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031099	Smarca1	ENSMUST00000077569	ENSMUSP00000076769	TRANSLATION	protein_coding	-	CCDS30104.1	1	1046	8	19.436	1.5	346.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031099	Smarca1	ENSMUST00000141084	ENSMUSP00000135570	TRANSLATION	protein_coding	-	-	2	381	8	5.546	0	188.4	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031099	Smarca1	ENSMUST00000101616	ENSMUSP00000099138	TRANSLATION	protein_coding	-	CCDS72374.1	1	1062	8	19.436	1.5	346.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031099	Smarca1	ENSMUST00000088973	ENSMUSP00000086366	TRANSLATION	protein_coding	-	CCDS30104.1	1	1046	8	19.436	1.5	346.1	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031099	Smarca1	ENSMUST00000140756	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031284	Pak3	ENSMUST00000033640	ENSMUSP00000033640	TRANSLATION	protein_coding	-	CCDS57779.1	1	559	20	9.45	11.5	316.4	0	-4,-5	-	-	19.734	ALTERNATIVE:1
ENSMUSG00000031284	Pak3	ENSMUST00000156449	ENSMUSP00000118716	TRANSLATION	protein_coding	stop	-	5	155	0	1.932	0	84.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031284	Pak3	ENSMUST00000126592	ENSMUSP00000114352	TRANSLATION	protein_coding	stop	-	2	23	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031284	Pak3	ENSMUST00000112864	ENSMUSP00000108485	TRANSLATION	protein_coding	-	CCDS30454.1	1	544	20	9.7	7.5	329.2	0	-4,-5	-	-	19.857	PRINCIPAL:3
ENSMUSG00000031284	Pak3	ENSMUST00000112865	ENSMUSP00000108486	TRANSLATION	protein_coding	-	CCDS30454.1	5	544	20	9.7	7.5	329.2	0	-4,-5	-	-	19.857	PRINCIPAL:3
ENSMUSG00000031284	Pak3	ENSMUST00000155215	ENSMUSP00000118549	TRANSLATION	protein_coding	stop	-	3	195	0	1.75	0	72	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031284	Pak3	ENSMUST00000172330	ENSMUSP00000126562	TRANSLATION	protein_coding	-	CCDS30454.1	1	544	20	9.7	7.5	329.2	0	-4,-5	-	-	19.857	PRINCIPAL:3
ENSMUSG00000031284	Pak3	ENSMUST00000112863	ENSMUSP00000108484	TRANSLATION	protein_coding	-	CCDS57779.1	5	559	20	9.45	11.5	316.4	0	-4,-5	-	-	19.734	ALTERNATIVE:1
ENSMUSG00000031284	Pak3	ENSMUST00000134402	ENSMUSP00000119090	TRANSLATION	protein_coding	stop	-	5	366	10	4.325	0	114.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031284	Pak3	ENSMUST00000112868	ENSMUSP00000108489	TRANSLATION	protein_coding	-	CCDS30454.1	5	544	20	9.7	7.5	329.2	0	-4,-5	-	-	19.857	PRINCIPAL:3
ENSMUSG00000100194	Tgif2lx2	ENSMUST00000072518	ENSMUSP00000072333	TRANSLATION	protein_coding	-	CCDS53177.1	-	231	0	0.2	0.5	46.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079577	Gm14692	ENSMUST00000114672	ENSMUSP00000110320	TRANSLATION	protein_coding	-	CCDS53083.1	5	229	0	3	0.5	120.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000044359	P2ry4	ENSMUST00000053373	ENSMUSP00000055869	TRANSLATION	protein_coding	-	CCDS30303.1	1	361	0	0.48	1.5	135.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009731	Kcnd1	ENSMUST00000009875	ENSMUSP00000009875	TRANSLATION	protein_coding	-	CCDS29974.1	1	651	0	1.6	2.7	427.4	0	0,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000009731	Kcnd1	ENSMUST00000125440	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033436	Armcx2	ENSMUST00000113193	ENSMUSP00000108818	TRANSLATION	protein_coding	-	CCDS30401.1	1	784	0	0	0.5	354.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033436	Armcx2	ENSMUST00000035559	ENSMUSP00000049147	TRANSLATION	protein_coding	-	CCDS30401.1	1	784	0	0	0.5	354.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033436	Armcx2	ENSMUST00000119010	ENSMUSP00000112507	TRANSLATION	protein_coding	-	CCDS30401.1	1	784	0	0	0.5	354.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033436	Armcx2	ENSMUST00000168264	ENSMUSP00000127305	TRANSLATION	protein_coding	-	CCDS30401.1	1	784	0	0	0.5	354.6	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000033436	Armcx2	ENSMUST00000141322	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033436	Armcx2	ENSMUST00000149902	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033436	Armcx2	ENSMUST00000150814	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000881	Dlg3	ENSMUST00000151020	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000881	Dlg3	ENSMUST00000148076	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000881	Dlg3	ENSMUST00000113735	ENSMUSP00000109364	TRANSLATION	protein_coding	-	CCDS53149.1	1	512	13	10.705	7.5	329.2	0	-2,2	-	-	9	MINOR
ENSMUSG00000000881	Dlg3	ENSMUST00000087984	ENSMUSP00000085299	TRANSLATION	protein_coding	-	CCDS30307.1	1	849	13	15.725	1.5	607	0	-4,-5	-	-	18.231	PRINCIPAL:3
ENSMUSG00000000881	Dlg3	ENSMUST00000147863	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000881	Dlg3	ENSMUST00000146772	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000881	Dlg3	ENSMUST00000113736	ENSMUSP00000109365	TRANSLATION	protein_coding	-	CCDS53148.1	1	835	13	15.425	1.5	607	0	-4,-5	-	-	17.631	ALTERNATIVE:2
ENSMUSG00000000881	Dlg3	ENSMUST00000000901	ENSMUSP00000000901	TRANSLATION	protein_coding	-	CCDS72413.1	1	817	13	15.025	5.1	566.2	0	-4,-5	-	-	16.047	MINOR
ENSMUSG00000000037	Scml2	ENSMUST00000087090	ENSMUSP00000084325	TRANSLATION	protein_coding	-	-	5	827	0	6.03	0	319.5	0	-4,-5	-	-	11.328	ALTERNATIVE:2
ENSMUSG00000000037	Scml2	ENSMUST00000101113	ENSMUSP00000098672	TRANSLATION	protein_coding	-	-	5	825	0	6.03	0	319.5	0	-4,-5	-	-	11.328	ALTERNATIVE:2
ENSMUSG00000000037	Scml2	ENSMUST00000238603	ENSMUSP00000158772	TRANSLATION	protein_coding	stop	-	-	367	0	3.83	0	169.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000037	Scml2	ENSMUST00000019101	ENSMUSP00000019101	TRANSLATION	protein_coding	-	CCDS72460.1	1	905	0	5.766	0.5	319.5	0	-4,-5	-	-	10.8	MINOR
ENSMUSG00000000037	Scml2	ENSMUST00000074802	ENSMUSP00000074356	TRANSLATION	protein_coding	-	CCDS81193.1	5	845	0	5.766	0.5	319.5	0	-4,-5	-	-	10.8	MINOR
ENSMUSG00000000037	Scml2	ENSMUST00000124775	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000037	Scml2	ENSMUST00000112345	ENSMUSP00000107964	TRANSLATION	protein_coding	-	-	5	901	0	5.766	0.5	319.5	0	-4,-5	-	-	10.8	MINOR
ENSMUSG00000000037	Scml2	ENSMUST00000077375	ENSMUSP00000076593	TRANSLATION	protein_coding	-	-	1	969	0	6.366	0	319.5	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000000037	Scml2	ENSMUST00000238361	ENSMUSP00000158809	TRANSLATION	protein_coding	start	-	-	130	0	1.6	0	64.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000078320	Tex13c1	ENSMUST00000105113	ENSMUSP00000100745	TRANSLATION	protein_coding	-	CCDS72373.1	3	604	4	0	0.5	219.3	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000048355	Arxes1	ENSMUST00000057625	ENSMUSP00000062660	TRANSLATION	protein_coding	-	CCDS53192.1	-	180	0	0	13.3	189.8	0	-1,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000085584	Rtl9	ENSMUST00000165829	ENSMUSP00000128287	TRANSLATION	protein_coding	-	CCDS72442.1	1	1367	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000043384	Gprasp1	ENSMUST00000149595	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043384	Gprasp1	ENSMUST00000113144	ENSMUSP00000108769	TRANSLATION	protein_coding	-	CCDS30409.1	1	1347	0	0	1.5	179.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043384	Gprasp1	ENSMUST00000113147	ENSMUSP00000108772	TRANSLATION	protein_coding	-	CCDS30409.1	1	1347	0	0	1.5	179.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043384	Gprasp1	ENSMUST00000166554	ENSMUSP00000132225	TRANSLATION	protein_coding	-	CCDS30409.1	1	1347	0	0	1.5	179.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043384	Gprasp1	ENSMUST00000113145	ENSMUSP00000108770	TRANSLATION	protein_coding	-	CCDS30409.1	1	1347	0	0	1.5	179.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000043384	Gprasp1	ENSMUST00000143034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000154827	ENSMUSP00000131622	TRANSLATION	nonsense_mediated_decay	-	-	1	155	15	2.95	0	91.9	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000144185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000197138	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041718	Alg13	ENSMUST00000132416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000040338	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000145724	ENSMUSP00000131340	TRANSLATION	nonsense_mediated_decay	-	-	5	81	5	1.4	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000123710	ENSMUSP00000126052	TRANSLATION	protein_coding	-	-	1	61	0	0.85	7.9	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000149330	ENSMUSP00000130514	TRANSLATION	protein_coding	-	-	2	61	0	0.85	7.9	0	0	-4,-5	-	-	4.002	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000197316	ENSMUSP00000142956	TRANSLATION	nonsense_mediated_decay	-	-	5	51	0	0.45	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000070801	ENSMUSP00000068403	TRANSLATION	protein_coding	-	CCDS30456.1	1	165	15	3.35	7.3	93.8	0	-3,-5	-	-	20.739	PRINCIPAL:1
ENSMUSG00000041718	Alg13	ENSMUST00000199040	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041718	Alg13	ENSMUST00000149427	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000149811	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041718	Alg13	ENSMUST00000198039	ENSMUSP00000143124	TRANSLATION	nonsense_mediated_decay	-	-	5	48	0	0.45	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041718	Alg13	ENSMUST00000238864	ENSMUSP00000159009	TRANSLATION	protein_coding	-	-	-	969	0	2.784	0	47.2	0	-4,-5	-	-	7.884	MINOR
ENSMUSG00000040147	Maob	ENSMUST00000163344	ENSMUSP00000131743	TRANSLATION	nonsense_mediated_decay	-	-	5	112	18	2.8	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040147	Maob	ENSMUST00000173143	ENSMUSP00000134555	TRANSLATION	nonsense_mediated_decay	-	-	5	35	8	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040147	Maob	ENSMUST00000040820	ENSMUSP00000040550	TRANSLATION	protein_coding	-	CCDS40882.1	1	520	37	13.83	10.6	244.3	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000040147	Maob	ENSMUST00000168613	ENSMUSP00000127235	TRANSLATION	nonsense_mediated_decay	-	-	5	211	18	5.75	0	79.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054994	AV320801	ENSMUST00000068340	ENSMUSP00000068753	TRANSLATION	protein_coding	-	CCDS53189.1	1	467	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000047797	Gjb1	ENSMUST00000052130	ENSMUSP00000062723	TRANSLATION	protein_coding	-	CCDS30314.1	1	283	0	1	8.8	278.4	3	-2,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047797	Gjb1	ENSMUST00000119190	ENSMUSP00000113516	TRANSLATION	protein_coding	-	CCDS30314.1	2	283	0	1	8.8	278.4	3	-2,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000047797	Gjb1	ENSMUST00000119080	ENSMUSP00000113904	TRANSLATION	protein_coding	-	CCDS30314.1	3	283	0	1	8.8	278.4	3	-2,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031246	Sh3bgrl	ENSMUST00000133614	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031246	Sh3bgrl	ENSMUST00000033598	ENSMUSP00000033598	TRANSLATION	protein_coding	-	CCDS41102.1	1	114	0	2.58	19.5	153	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031246	Sh3bgrl	ENSMUST00000126097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054034	Tceal5	ENSMUST00000066819	ENSMUSP00000065397	TRANSLATION	protein_coding	-	CCDS30416.1	1	200	0	0	1.5	134.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000054034	Tceal5	ENSMUST00000151592	ENSMUSP00000118630	TRANSLATION	protein_coding	stop	-	3	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000054034	Tceal5	ENSMUST00000131510	ENSMUSP00000114653	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031216	Stard8	ENSMUST00000149999	ENSMUSP00000114897	TRANSLATION	protein_coding	stop	-	3	57	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031216	Stard8	ENSMUST00000145820	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031216	Stard8	ENSMUST00000127361	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031216	Stard8	ENSMUST00000036606	ENSMUSP00000044491	TRANSLATION	protein_coding	-	CCDS30297.1	1	1019	0	7.4	0.5	305.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031257	Nox1	ENSMUST00000162833	ENSMUSP00000123841	TRANSLATION	protein_coding	stop	-	1	75	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000031257	Nox1	ENSMUST00000159231	ENSMUSP00000124225	TRANSLATION	protein_coding	stop	-	1	75	0	0	0	0	2	-4,-2	-	-	-1	MINOR
ENSMUSG00000031257	Nox1	ENSMUST00000159259	ENSMUSP00000124355	TRANSLATION	protein_coding	-	-	5	526	0	4	4.8	80.3	6	1,-4	-	-	13.287	MINOR
ENSMUSG00000031257	Nox1	ENSMUST00000113275	ENSMUSP00000108900	TRANSLATION	protein_coding	-	-	5	514	0	3	3.6	87.1	7	1,-4	-	-	11.202	MINOR
ENSMUSG00000031257	Nox1	ENSMUST00000033610	ENSMUSP00000033610	TRANSLATION	protein_coding	-	CCDS30390.1	1	563	0	4	7.5	87.1	7	1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000031145	Prickle3	ENSMUST00000123172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031145	Prickle3	ENSMUST00000129662	ENSMUSP00000127892	TRANSLATION	protein_coding	-	-	2	556	23	1.6	1	224.7	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031145	Prickle3	ENSMUST00000141876	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031145	Prickle3	ENSMUST00000033485	ENSMUSP00000033485	TRANSLATION	protein_coding	-	CCDS72329.1	1	624	23	1.6	0.5	224.7	0	-4,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000031145	Prickle3	ENSMUST00000153994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036782	Klhl13	ENSMUST00000115319	ENSMUSP00000110974	TRANSLATION	protein_coding	-	CCDS72348.1	1	648	0	3.58	13.7	345.2	0	-4,-5	-	-	15.628	PRINCIPAL:2
ENSMUSG00000036782	Klhl13	ENSMUST00000115316	ENSMUSP00000110971	TRANSLATION	protein_coding	-	CCDS81105.1	5	640	0	3.58	2.7	345.2	0	-4,-7	-	-	12.484	MINOR
ENSMUSG00000036782	Klhl13	ENSMUST00000115317	ENSMUSP00000110972	TRANSLATION	protein_coding	-	-	5	654	0	3.58	15	345.2	0	-4,-2	-	-	16	ALTERNATIVE:1
ENSMUSG00000036782	Klhl13	ENSMUST00000153345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036782	Klhl13	ENSMUST00000115313	ENSMUSP00000110968	TRANSLATION	protein_coding	-	-	1	604	0	3.58	0	345.2	0	-4,-1	-	-	12	MINOR
ENSMUSG00000036782	Klhl13	ENSMUST00000035973	ENSMUSP00000041190	TRANSLATION	protein_coding	-	CCDS40891.1	5	638	0	3.58	7.5	345.2	0	-4,-5	-	-	13.856	MINOR
ENSMUSG00000036782	Klhl13	ENSMUST00000144360	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031358	Msl3	ENSMUST00000129860	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031358	Msl3	ENSMUST00000033725	ENSMUSP00000033725	TRANSLATION	protein_coding	-	-	5	525	0	7.88	1.5	248.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031358	Msl3	ENSMUST00000145564	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031358	Msl3	ENSMUST00000112137	ENSMUSP00000107765	TRANSLATION	protein_coding	-	CCDS41211.1	1	466	0	6.13	1.5	215.4	0	-4,-5	-	-	6.534	MINOR
ENSMUSG00000067377	Tspan6	ENSMUST00000177468	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067377	Tspan6	ENSMUST00000176641	ENSMUSP00000135626	TRANSLATION	protein_coding	stop	-	5	166	0	1.86	0	91.8	4	-3,-5	-	-	-1	MINOR
ENSMUSG00000067377	Tspan6	ENSMUST00000176718	ENSMUSP00000135005	TRANSLATION	protein_coding	stop	-	5	199	0	2.238	0	101.8	9	-2,-5	-	-	-1	MINOR
ENSMUSG00000067377	Tspan6	ENSMUST00000087557	ENSMUSP00000084838	TRANSLATION	protein_coding	-	CCDS30387.1	1	245	0	2.868	7.5	175	9	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031253	Srpx2	ENSMUST00000113304	ENSMUSP00000108929	TRANSLATION	protein_coding	-	CCDS41119.2	1	468	0	3	6.3	306.9	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031253	Srpx2	ENSMUST00000033606	ENSMUSP00000033606	TRANSLATION	protein_coding	-	CCDS41119.2	1	468	0	3	6.3	306.9	0	2,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031278	Acsl4	ENSMUST00000112907	ENSMUSP00000108528	TRANSLATION	protein_coding	-	CCDS30448.1	1	711	25	6.97	10.8	351	1	-1,-5	-	-	21.324	PRINCIPAL:3
ENSMUSG00000031278	Acsl4	ENSMUST00000112904	ENSMUSP00000108525	TRANSLATION	protein_coding	-	CCDS41156.1	1	670	25	6.97	12.8	351	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000031278	Acsl4	ENSMUST00000140520	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031278	Acsl4	ENSMUST00000033634	ENSMUSP00000033634	TRANSLATION	protein_coding	-	CCDS30448.1	1	711	25	6.97	10.8	351	1	-1,-5	-	-	21.324	PRINCIPAL:3
ENSMUSG00000031278	Acsl4	ENSMUST00000112903	ENSMUSP00000108524	TRANSLATION	protein_coding	-	CCDS41156.1	1	670	25	6.97	12.8	351	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000073243	Gm9	ENSMUST00000101636	ENSMUSP00000099160	TRANSLATION	protein_coding	-	CCDS30073.1	1	162	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079638	Rhox2b	ENSMUST00000115191	ENSMUSP00000110845	TRANSLATION	protein_coding	-	CCDS53052.1	1	191	0	1.2	0.5	47.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094558	Btbd35f11	ENSMUST00000105020	ENSMUSP00000100637	TRANSLATION	protein_coding	-	CCDS40823.1	-	498	0	0	0.5	41.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031173	Otc	ENSMUST00000115528	ENSMUSP00000111190	TRANSLATION	protein_coding	-	-	1	351	6	7.4	0.5	311.8	0	-4,0	-	-	17.184	MINOR
ENSMUSG00000031173	Otc	ENSMUST00000049910	ENSMUSP00000056152	TRANSLATION	protein_coding	-	CCDS30015.1	1	354	6	7.5	7.5	322.1	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000031309	Rps6ka3	ENSMUST00000126686	ENSMUSP00000118007	TRANSLATION	protein_coding	stop	-	2	34	0	1.05	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031309	Rps6ka3	ENSMUST00000142668	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031309	Rps6ka3	ENSMUST00000112492	ENSMUSP00000108111	TRANSLATION	protein_coding	stop	-	5	135	17	3.88	0	61.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031309	Rps6ka3	ENSMUST00000149939	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031309	Rps6ka3	ENSMUST00000148570	ENSMUSP00000123059	TRANSLATION	protein_coding	start/stop	-	2	172	17	4.94	0	99.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031309	Rps6ka3	ENSMUST00000156648	ENSMUSP00000115271	TRANSLATION	protein_coding	start/stop	-	3	129	11	2.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031309	Rps6ka3	ENSMUST00000112493	ENSMUSP00000108112	TRANSLATION	protein_coding	-	CCDS85822.1	5	712	41	18.73	8.8	516.7	0	-4,-5	-	-	19.488	MINOR
ENSMUSG00000031309	Rps6ka3	ENSMUST00000033671	ENSMUSP00000033671	TRANSLATION	protein_coding	-	CCDS30502.1	1	740	41	19.09	11.6	516.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031309	Rps6ka3	ENSMUST00000112491	ENSMUSP00000108110	TRANSLATION	protein_coding	stop	-	3	211	23	5.83	0	175.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000137816	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000132453	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000139909	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000150426	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000026292	ENSMUSP00000026292	TRANSLATION	protein_coding	-	CCDS41176.1	1	4378	5	11	0.5	879	0	-4,-6	-	-	17	PRINCIPAL:2
ENSMUSG00000025261	Huwe1	ENSMUST00000147666	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000150020	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000112622	ENSMUSP00000108241	TRANSLATION	protein_coding	-	-	1	4377	5	11	0.5	879	0	-4,-6	-	-	17	ALTERNATIVE:2
ENSMUSG00000025261	Huwe1	ENSMUST00000153687	ENSMUSP00000114862	TRANSLATION	nonsense_mediated_decay	-	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000139245	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000131786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000130234	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000130243	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025261	Huwe1	ENSMUST00000239245	ENSMUSP00000159236	TRANSLATION	protein_coding	start/stop	-	-	226	0	0	0	91.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000152757	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000150882	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000156616	ENSMUSP00000114357	TRANSLATION	protein_coding	stop	-	3	9	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000138023	ENSMUSP00000120057	TRANSLATION	nonsense_mediated_decay	start	-	5	1176	0	1.2	0	419.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000138566	ENSMUSP00000122612	TRANSLATION	nonsense_mediated_decay	-	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000129714	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000149344	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000123306	ENSMUSP00000118185	TRANSLATION	nonsense_mediated_decay	start	-	3	150	0	0	0	73	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025261	Huwe1	ENSMUST00000139386	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025261	Huwe1	ENSMUST00000133051	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078346	H2al1n	ENSMUST00000105137	ENSMUSP00000100769	TRANSLATION	protein_coding	-	CCDS40879.1	-	109	0	0.8	0.5	34	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031160	Eras	ENSMUST00000033500	ENSMUSP00000033500	TRANSLATION	protein_coding	-	CCDS29980.1	1	227	21	0.8	1.5	118.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031340	Gabre	ENSMUST00000153740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031340	Gabre	ENSMUST00000148499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031340	Gabre	ENSMUST00000064780	ENSMUSP00000066543	TRANSLATION	protein_coding	-	CCDS30186.1	1	916	0	4.4	0.5	227.8	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000046550	Spin2c	ENSMUST00000148708	ENSMUSP00000120680	TRANSLATION	protein_coding	stop	-	3	106	0	1	0	97.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046550	Spin2c	ENSMUST00000049999	ENSMUSP00000059499	TRANSLATION	protein_coding	-	CCDS30485.1	1	257	0	2	3.9	253.6	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046550	Spin2c	ENSMUST00000123264	ENSMUSP00000115368	TRANSLATION	protein_coding	stop	-	2	110	0	1	0	97.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031224	Magee2	ENSMUST00000033575	ENSMUSP00000033575	TRANSLATION	protein_coding	-	CCDS30333.1	-	523	0	0.4	6.3	0	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000050424	Pnma5	ENSMUST00000114540	ENSMUSP00000110187	TRANSLATION	protein_coding	-	CCDS41004.1	1	618	0	0	0.5	399.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050424	Pnma5	ENSMUST00000152209	ENSMUSP00000114161	TRANSLATION	protein_coding	start	-	1	295	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000050424	Pnma5	ENSMUST00000051569	ENSMUSP00000063061	TRANSLATION	protein_coding	-	CCDS41004.1	-	618	0	0	0.5	399.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025264	Tsr2	ENSMUST00000026295	ENSMUSP00000026295	TRANSLATION	protein_coding	-	CCDS53222.1	2	195	0	0	5.1	89.4	0	-4,-5	-	-	7.893	MINOR
ENSMUSG00000025264	Tsr2	ENSMUST00000166010	ENSMUSP00000131835	TRANSLATION	nonsense_mediated_decay	-	-	1	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025264	Tsr2	ENSMUST00000166689	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025264	Tsr2	ENSMUST00000112683	ENSMUSP00000108303	TRANSLATION	protein_coding	-	CCDS30468.2	1	192	0	0	7.5	89.4	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025592	Dach2	ENSMUST00000113380	ENSMUSP00000109007	TRANSLATION	protein_coding	-	CCDS81163.1	1	500	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000025592	Dach2	ENSMUST00000146539	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025592	Dach2	ENSMUST00000067219	ENSMUSP00000064393	TRANSLATION	protein_coding	-	CCDS30363.1	1	634	0	1	0.5	125.5	0	-4,-2	-	-	12	PRINCIPAL:3
ENSMUSG00000025592	Dach2	ENSMUST00000113382	ENSMUSP00000109009	TRANSLATION	protein_coding	-	CCDS53175.1	1	606	0	1	1.7	125.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000025592	Dach2	ENSMUST00000113378	ENSMUSP00000109005	TRANSLATION	protein_coding	-	CCDS81165.1	1	448	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000025592	Dach2	ENSMUST00000113379	ENSMUSP00000109006	TRANSLATION	protein_coding	-	CCDS81164.1	1	445	0	0	0.5	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000025592	Dach2	ENSMUST00000141552	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025592	Dach2	ENSMUST00000123974	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025656	Arhgef9	ENSMUST00000197364	ENSMUSP00000142615	TRANSLATION	protein_coding	-	-	5	442	0	11.91	0	228.4	0	-4,-7	-	-	8.502	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000182137	ENSMUSP00000138243	TRANSLATION	protein_coding	start	-	3	108	0	1.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000182001	ENSMUSP00000138668	TRANSLATION	protein_coding	-	CCDS72409.1	1	495	0	11.83	11.3	224.3	0	-4,-5	-	-	11.094	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000197206	ENSMUSP00000142769	TRANSLATION	protein_coding	-	-	5	463	0	11.16	3.6	184.1	0	-4,-5	-	-	5.1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000182135	ENSMUSP00000143184	TRANSLATION	protein_coding	start	-	5	42	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000199920	ENSMUSP00000143779	TRANSLATION	protein_coding	-	CCDS72409.1	5	495	0	11.83	11.3	224.3	0	-4,-5	-	-	11.094	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113878	ENSMUSP00000109510	TRANSLATION	protein_coding	-	CCDS53137.1	1	516	0	12.33	11.3	228.4	0	-4,-5	-	-	12.342	PRINCIPAL:2
ENSMUSG00000025656	Arhgef9	ENSMUST00000196012	ENSMUSP00000143373	TRANSLATION	protein_coding	stop	-	5	68	0	1.5	0	44.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113873	ENSMUSP00000109505	TRANSLATION	protein_coding	-	-	5	414	0	9.83	3.6	184.1	0	-4,-5	-	-	4.098	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000196354	ENSMUSP00000143086	TRANSLATION	protein_coding	start	-	5	258	0	5.58	0	56.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113885	ENSMUSP00000109517	TRANSLATION	protein_coding	-	-	5	515	0	12.33	0	228.4	0	-4,-7	-	-	9.342	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113884	ENSMUSP00000109516	TRANSLATION	protein_coding	-	-	5	560	0	13.66	0	228.4	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000025656	Arhgef9	ENSMUST00000198753	ENSMUSP00000142911	TRANSLATION	protein_coding	stop	-	5	236	0	6.75	0	153.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113882	ENSMUSP00000109514	TRANSLATION	protein_coding	-	-	5	516	0	12.33	11.3	228.4	0	-4,-7	-	-	12.342	ALTERNATIVE:1
ENSMUSG00000025656	Arhgef9	ENSMUST00000200628	ENSMUSP00000142905	TRANSLATION	protein_coding	stop	-	5	219	0	6	0	133.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000182562	ENSMUSP00000138147	TRANSLATION	protein_coding	stop	-	3	54	0	1.5	0	44.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113876	ENSMUSP00000109508	TRANSLATION	protein_coding	-	CCDS72409.1	1	495	0	11.83	11.3	224.3	0	-4,-5	-	-	11.094	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000113883	ENSMUSP00000109515	TRANSLATION	protein_coding	-	-	5	516	0	12.33	11.3	228.4	0	-4,-7	-	-	12.342	ALTERNATIVE:1
ENSMUSG00000025656	Arhgef9	ENSMUST00000181987	ENSMUSP00000138461	TRANSLATION	protein_coding	-	-	2	496	0	12.66	0	228.4	0	-4,-7	-	-	10.002	MINOR
ENSMUSG00000025656	Arhgef9	ENSMUST00000128565	ENSMUSP00000138258	TRANSLATION	protein_coding	-	-	5	411	0	11.49	0	184.1	0	-4,-5	-	-	5.004	MINOR
ENSMUSG00000048994	H2al3	ENSMUST00000057113	ENSMUSP00000052025	TRANSLATION	protein_coding	-	CCDS52999.1	-	128	0	0.48	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055691	Gja6	ENSMUST00000069417	ENSMUSP00000069187	TRANSLATION	protein_coding	-	CCDS30506.1	1	283	0	0.56	0.5	294.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000033343	Magea4	ENSMUST00000048675	ENSMUSP00000046715	TRANSLATION	protein_coding	stop	CCDS30185.1	-	315	0	0.8	1.5	31	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000031179	3830417A13Rik	ENSMUST00000033522	ENSMUSP00000033522	TRANSLATION	protein_coding	-	CCDS30166.1	1	303	0	0.8	1.5	28.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031179	3830417A13Rik	ENSMUST00000151996	ENSMUSP00000122540	TRANSLATION	protein_coding	stop	-	3	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073001	Cylc1	ENSMUST00000210720	ENSMUSP00000147334	TRANSLATION	protein_coding	-	-	5	642	0	0	0.5	127	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000073001	Cylc1	ENSMUST00000101282	ENSMUSP00000098840	TRANSLATION	protein_coding	-	CCDS41103.1	1	640	0	0	0.5	127	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000000838	Fmr1	ENSMUST00000114653	ENSMUSP00000110301	TRANSLATION	protein_coding	-	CCDS72385.1	1	589	0	9.25	6.3	233.5	0	-4,-5	-	-	8.409	MINOR
ENSMUSG00000000838	Fmr1	ENSMUST00000114657	ENSMUSP00000110305	TRANSLATION	protein_coding	-	-	5	593	0	9.25	5.1	281.4	0	-4,-5	-	-	9.207	MINOR
ENSMUSG00000000838	Fmr1	ENSMUST00000141728	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000146177	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000127954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000127993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000114656	ENSMUSP00000110304	TRANSLATION	protein_coding	-	-	5	591	0	9.25	5.1	249.2	0	-4,-5	-	-	7.863	MINOR
ENSMUSG00000000838	Fmr1	ENSMUST00000142584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000114655	ENSMUSP00000110303	TRANSLATION	protein_coding	-	-	5	631	0	9.25	7.3	359	0	-4,-5	-	-	14.865	PRINCIPAL:1
ENSMUSG00000000838	Fmr1	ENSMUST00000148348	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000838	Fmr1	ENSMUST00000133327	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000838	Fmr1	ENSMUST00000114654	ENSMUSP00000110302	TRANSLATION	protein_coding	-	-	5	585	0	9.25	6	311	0	-4,-5	-	-	11.394	MINOR
ENSMUSG00000000838	Fmr1	ENSMUST00000088546	ENSMUSP00000085906	TRANSLATION	protein_coding	-	CCDS30171.1	1	614	0	9.25	7.6	281.4	0	-4,-5	-	-	10.344	MINOR
ENSMUSG00000079418	Atg4a	ENSMUST00000147972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079418	Atg4a	ENSMUST00000112971	ENSMUSP00000108595	TRANSLATION	protein_coding	-	CCDS85810.1	1	396	0	9.8	0.5	332.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079418	Atg4a	ENSMUST00000153742	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047242	Taf9b	ENSMUST00000134547	ENSMUSP00000115178	TRANSLATION	protein_coding	stop	-	3	80	0	1.95	0	96.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047242	Taf9b	ENSMUST00000113495	ENSMUSP00000109123	TRANSLATION	protein_coding	-	CCDS53170.1	1	293	0	1.95	0.5	167.5	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000047242	Taf9b	ENSMUST00000055497	ENSMUSP00000059751	TRANSLATION	protein_coding	-	CCDS30340.1	1	249	0	1.95	4.1	167.5	0	-4,-5	-	-	13	PRINCIPAL:3
ENSMUSG00000036022	Fam122b	ENSMUST00000114841	ENSMUSP00000110490	TRANSLATION	protein_coding	-	CCDS53069.1	1	230	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036022	Fam122b	ENSMUST00000114838	ENSMUSP00000110487	TRANSLATION	protein_coding	-	CCDS53070.1	1	255	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000036022	Fam122b	ENSMUST00000071023	ENSMUSP00000069112	TRANSLATION	protein_coding	-	CCDS30129.1	1	256	0	0	2.7	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000036022	Fam122b	ENSMUST00000143069	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079704	Gm14459	ENSMUST00000115573	ENSMUSP00000111236	TRANSLATION	protein_coding	-	CCDS52992.1	5	179	0	0	0.5	82.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000000355	Mcts1	ENSMUST00000134573	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000355	Mcts1	ENSMUST00000133128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000355	Mcts1	ENSMUST00000140204	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000355	Mcts1	ENSMUST00000000365	ENSMUSP00000000365	TRANSLATION	protein_coding	-	CCDS30094.1	1	181	0	4.5	19.5	74	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000000355	Mcts1	ENSMUST00000148938	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073139	Tmem185a	ENSMUST00000134954	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073139	Tmem185a	ENSMUST00000114630	ENSMUSP00000110277	TRANSLATION	protein_coding	-	-	1	350	0	0	15	208.9	10	-3,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000073139	Tmem185a	ENSMUST00000101506	ENSMUSP00000099043	TRANSLATION	protein_coding	-	CCDS30176.1	1	322	0	0	1.7	111.3	9	-3,-5	-	-	0.344	MINOR
ENSMUSG00000073139	Tmem185a	ENSMUST00000154400	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015291	Gdi1	ENSMUST00000144317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015291	Gdi1	ENSMUST00000146013	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015291	Gdi1	ENSMUST00000015435	ENSMUSP00000015435	TRANSLATION	protein_coding	-	CCDS30227.1	1	447	0	10.83	19.5	803.3	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000015291	Gdi1	ENSMUST00000130581	ENSMUSP00000122146	TRANSLATION	protein_coding	start	-	5	149	0	3	0	105.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015291	Gdi1	ENSMUST00000153141	ENSMUSP00000119805	TRANSLATION	protein_coding	stop	-	5	78	0	2.25	0	124.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015291	Gdi1	ENSMUST00000145580	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015291	Gdi1	ENSMUST00000135041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015291	Gdi1	ENSMUST00000137447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015291	Gdi1	ENSMUST00000128915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015291	Gdi1	ENSMUST00000149391	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043453	Magea10	ENSMUST00000088481	ENSMUSP00000085832	TRANSLATION	protein_coding	-	CCDS41002.1	1	325	0	0.8	0.5	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000055109	Gm15155	ENSMUST00000128838	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000055109	Gm15155	ENSMUST00000112542	ENSMUSP00000108161	TRANSLATION	protein_coding	-	-	1	138	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000042712	Tceal9	ENSMUST00000048687	ENSMUSP00000047474	TRANSLATION	protein_coding	-	CCDS30418.1	1	104	0	0	6.3	72.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000042712	Tceal9	ENSMUST00000113115	ENSMUSP00000108740	TRANSLATION	protein_coding	-	CCDS30418.1	2	104	0	0	6.3	72.4	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031212	Pgr15l	ENSMUST00000033556	ENSMUSP00000033556	TRANSLATION	protein_coding	-	CCDS30292.1	1	456	0	2.2	1.5	166.6	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000049536	Tceal1	ENSMUST00000055104	ENSMUSP00000061875	TRANSLATION	protein_coding	-	CCDS30421.1	1	165	0	0	1.5	105.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042525	4933428M09Rik	ENSMUST00000113046	ENSMUSP00000108669	TRANSLATION	protein_coding	-	-	1	192	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031132	Cd40lg	ENSMUST00000033466	ENSMUSP00000033466	TRANSLATION	protein_coding	-	CCDS30152.1	1	260	0	2.05	2.7	101.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031397	Tktl1	ENSMUST00000010127	ENSMUSP00000010127	TRANSLATION	protein_coding	-	CCDS30221.1	1	595	22	12.75	1.5	252.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031397	Tktl1	ENSMUST00000156959	ENSMUSP00000117388	TRANSLATION	nonsense_mediated_decay	-	-	5	126	5	2.55	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000115248	ENSMUSP00000110903	TRANSLATION	protein_coding	-	CCDS53050.1	1	222	5	0	19.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000150873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000047486	ENSMUSP00000040134	TRANSLATION	protein_coding	-	CCDS53050.1	1	222	5	0	19.5	0	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000127966	-	NO_TRANSLATION	retained_intron
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000143544	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006423	C330007P06Rik	ENSMUST00000115249	ENSMUSP00000110904	TRANSLATION	protein_coding	-	-	5	227	5	0	0	0	0	-4,-5	-	-	5	MINOR
ENSMUSG00000093806	Asmt	ENSMUST00000178693	ENSMUSP00000137135	TRANSLATION	protein_coding	-	CCDS85832.1	1	387	20	6.35	0.5	351.5	0	-4,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000031134	Rbmx	ENSMUST00000098470	ENSMUSP00000096070	TRANSLATION	protein_coding	-	-	5	301	0	3	0	165.7	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031134	Rbmx	ENSMUST00000140384	ENSMUSP00000125720	TRANSLATION	nonsense_mediated_decay	-	-	1	289	0	3	1	165.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031134	Rbmx	ENSMUST00000114726	ENSMUSP00000110374	TRANSLATION	protein_coding	-	CCDS30153.1	1	391	0	3	5.3	165.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031134	Rbmx	ENSMUST00000143310	ENSMUSP00000138198	TRANSLATION	protein_coding	-	-	5	263	0	0	0	81.1	0	-4,-5	-	-	0.924	MINOR
ENSMUSG00000031134	Rbmx	ENSMUST00000114730	ENSMUSP00000110378	TRANSLATION	protein_coding	-	CCDS30153.1	5	391	0	3	5.3	165.7	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031134	Rbmx	ENSMUST00000133346	ENSMUSP00000118121	TRANSLATION	protein_coding	stop	-	3	103	0	3	0	84.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000048173	Olfr1324	ENSMUST00000050044	ENSMUSP00000052365	TRANSLATION	protein_coding	-	-	-	314	0	0.42	1.2	197.2	5	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048173	Olfr1324	ENSMUST00000219631	ENSMUSP00000151664	TRANSLATION	protein_coding	-	CCDS30120.1	-	332	0	0.42	0.5	197.2	5	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000048173	Olfr1324	ENSMUST00000215270	ENSMUSP00000149958	TRANSLATION	protein_coding	-	-	2	314	0	0.42	1.2	197.2	5	-3,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000094624	Gm4836	ENSMUST00000179874	ENSMUSP00000137394	TRANSLATION	protein_coding	-	CCDS30055.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031214	Ophn1	ENSMUST00000156634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031214	Ophn1	ENSMUST00000154920	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031214	Ophn1	ENSMUST00000147529	ENSMUSP00000121723	TRANSLATION	protein_coding	start	-	3	132	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031214	Ophn1	ENSMUST00000033560	ENSMUSP00000033560	TRANSLATION	protein_coding	-	CCDS30295.1	1	802	0	10.4248	6.3	433	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031214	Ophn1	ENSMUST00000113826	ENSMUSP00000109457	TRANSLATION	protein_coding	-	CCDS30295.1	1	802	0	10.4248	6.3	433	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031214	Ophn1	ENSMUST00000125150	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031214	Ophn1	ENSMUST00000156917	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031214	Ophn1	ENSMUST00000140598	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031214	Ophn1	ENSMUST00000142267	ENSMUSP00000119361	TRANSLATION	protein_coding	stop	-	1	129	0	1.78	0	109.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031214	Ophn1	ENSMUST00000147805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025332	Kdm5c	ENSMUST00000082177	ENSMUSP00000080814	TRANSLATION	protein_coding	-	-	5	1510	19	13.45	0.5	665.7	0	-4,-5	-	-	14.232	MINOR
ENSMUSG00000025332	Kdm5c	ENSMUST00000112588	ENSMUSP00000108207	TRANSLATION	protein_coding	-	CCDS41178.1	1	1551	19	14.45	1.5	695.2	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000025332	Kdm5c	ENSMUST00000155793	ENSMUSP00000123364	TRANSLATION	protein_coding	start	-	2	177	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025332	Kdm5c	ENSMUST00000156114	ENSMUSP00000122750	TRANSLATION	protein_coding	start/stop	-	3	257	8	0	0	97	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025332	Kdm5c	ENSMUST00000112584	ENSMUSP00000108203	TRANSLATION	protein_coding	-	-	5	1554	19	14.45	1.5	695.2	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000025332	Kdm5c	ENSMUST00000154938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050379	Septin6	ENSMUST00000128766	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050379	Septin6	ENSMUST00000152291	ENSMUSP00000116670	TRANSLATION	protein_coding	stop	-	3	141	7	2.33	0	57.6	0	-3,-4	-	-	-1	MINOR
ENSMUSG00000050379	Septin6	ENSMUST00000115239	ENSMUSP00000110894	TRANSLATION	protein_coding	-	CCDS53051.1	1	434	17	8.33	13.7	319.6	0	-4,-5	-	-	22	ALTERNATIVE:1
ENSMUSG00000050379	Septin6	ENSMUST00000053456	ENSMUSP00000054034	TRANSLATION	protein_coding	-	CCDS57749.1	1	427	17	8.33	13.5	319.6	0	-4,-5	-	-	21.936	ALTERNATIVE:1
ENSMUSG00000050379	Septin6	ENSMUST00000060474	ENSMUSP00000062014	TRANSLATION	protein_coding	-	CCDS30066.1	1	429	17	8.33	13.5	319.6	0	-4,-5	-	-	21.936	PRINCIPAL:3
ENSMUSG00000048047	Zbtb33	ENSMUST00000049740	ENSMUSP00000049983	TRANSLATION	protein_coding	-	CCDS30088.1	1	671	12	0.6	1.5	70.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048047	Zbtb33	ENSMUST00000115142	ENSMUSP00000110795	TRANSLATION	protein_coding	-	CCDS30088.1	1	671	12	0.6	1.5	70.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000048047	Zbtb33	ENSMUST00000131124	ENSMUSP00000118993	TRANSLATION	protein_coding	stop	-	1	617	12	0.6	0	70.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079534	Gm5640	ENSMUST00000114119	ENSMUSP00000109754	TRANSLATION	protein_coding	-	-	3	728	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000015290	Ubl4a	ENSMUST00000126117	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015290	Ubl4a	ENSMUST00000140632	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015290	Ubl4a	ENSMUST00000178691	ENSMUSP00000136070	TRANSLATION	protein_coding	-	CCDS30230.1	2	157	0	4	3.9	74	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000015290	Ubl4a	ENSMUST00000155676	ENSMUSP00000120461	TRANSLATION	protein_coding	-	CCDS30230.1	1	157	0	4	3.9	74	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000015290	Ubl4a	ENSMUST00000015434	ENSMUSP00000015434	TRANSLATION	nonsense_mediated_decay	-	-	3	102	0	1.5	0	46.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015290	Ubl4a	ENSMUST00000126191	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015290	Ubl4a	ENSMUST00000125914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044550	Tceal3	ENSMUST00000060904	ENSMUSP00000059401	TRANSLATION	protein_coding	-	CCDS30420.1	1	200	0	0	2.7	127.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044550	Tceal3	ENSMUST00000138047	ENSMUSP00000114903	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044550	Tceal3	ENSMUST00000128040	ENSMUSP00000117087	TRANSLATION	protein_coding	stop	-	5	176	0	0	0	127.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044550	Tceal3	ENSMUST00000145648	ENSMUSP00000123502	TRANSLATION	protein_coding	stop	-	3	4	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044550	Tceal3	ENSMUST00000153780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044550	Tceal3	ENSMUST00000113100	ENSMUSP00000108724	TRANSLATION	protein_coding	-	CCDS30420.1	1	200	0	0	2.7	127.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044550	Tceal3	ENSMUST00000125067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015342	Xk	ENSMUST00000015486	ENSMUSP00000015486	TRANSLATION	protein_coding	-	CCDS30008.1	1	446	0	0	1.5	287.2	0	3,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035277	Arx	ENSMUST00000046565	ENSMUSP00000049039	TRANSLATION	protein_coding	-	CCDS30271.1	1	564	0	0.9	0.5	119.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035277	Arx	ENSMUST00000187010	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035277	Arx	ENSMUST00000113947	ENSMUSP00000109580	TRANSLATION	protein_coding	-	CCDS30271.1	1	564	0	0.9	0.5	119.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031384	Asb9	ENSMUST00000033756	ENSMUSP00000033756	TRANSLATION	protein_coding	-	CCDS30524.1	1	290	0	6.2	2.7	125.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031153	Gripap1	ENSMUST00000144946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031153	Gripap1	ENSMUST00000115675	ENSMUSP00000111339	TRANSLATION	protein_coding	-	CCDS72334.1	1	837	0	0	2.7	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031153	Gripap1	ENSMUST00000132456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031153	Gripap1	ENSMUST00000140540	ENSMUSP00000116683	TRANSLATION	protein_coding	stop	-	1	469	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031153	Gripap1	ENSMUST00000141178	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031153	Gripap1	ENSMUST00000136930	ENSMUSP00000116140	TRANSLATION	protein_coding	stop	-	1	485	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031153	Gripap1	ENSMUST00000101694	ENSMUSP00000099218	TRANSLATION	protein_coding	-	-	5	792	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031153	Gripap1	ENSMUST00000135622	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031153	Gripap1	ENSMUST00000065932	ENSMUSP00000068789	TRANSLATION	protein_coding	-	CCDS40844.1	1	806	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000031153	Gripap1	ENSMUST00000147232	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039521	Foxp3	ENSMUST00000115740	ENSMUSP00000111405	TRANSLATION	protein_coding	-	CCDS29965.1	1	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039521	Foxp3	ENSMUST00000234363	ENSMUSP00000157093	TRANSLATION	protein_coding	-	CCDS29965.1	-	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039521	Foxp3	ENSMUST00000115738	ENSMUSP00000111403	TRANSLATION	protein_coding	-	CCDS29965.1	1	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039521	Foxp3	ENSMUST00000234015	ENSMUSP00000157266	TRANSLATION	protein_coding	-	-	-	402	4	4.75	0	156.7	0	-4,-7	-	-	12.916	MINOR
ENSMUSG00000039521	Foxp3	ENSMUST00000234896	ENSMUSP00000157243	TRANSLATION	protein_coding	stop	-	-	54	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000039521	Foxp3	ENSMUST00000234479	ENSMUSP00000157242	TRANSLATION	nonsense_mediated_decay	-	-	-	335	4	2.5	0	92.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000039521	Foxp3	ENSMUST00000234574	ENSMUSP00000157007	TRANSLATION	protein_coding	-	-	-	394	4	5.5	1.2	183.1	0	-4,-7	-	-	16.098	MINOR
ENSMUSG00000039521	Foxp3	ENSMUST00000115739	ENSMUSP00000111404	TRANSLATION	protein_coding	-	CCDS29965.1	1	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039521	Foxp3	ENSMUST00000235116	ENSMUSP00000157059	TRANSLATION	protein_coding	-	CCDS29965.1	-	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000039521	Foxp3	ENSMUST00000045566	ENSMUSP00000041953	TRANSLATION	protein_coding	-	CCDS29965.1	5	429	4	5.5	5.1	183.1	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000071665	Foxr2	ENSMUST00000163801	ENSMUSP00000128452	TRANSLATION	protein_coding	-	CCDS30479.1	5	302	0	0.2	1.5	84.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071665	Foxr2	ENSMUST00000096265	ENSMUSP00000093984	TRANSLATION	protein_coding	-	CCDS30479.1	1	302	0	0.2	1.5	84.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031230	Fgf16	ENSMUST00000033581	ENSMUSP00000033581	TRANSLATION	protein_coding	-	CCDS30336.1	1	207	7	3	13.3	161.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000067684	Obp1a	ENSMUST00000088201	ENSMUSP00000085531	TRANSLATION	protein_coding	-	CCDS30251.1	1	163	0	3.4	0.5	85.8	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096788	Rhox2e	ENSMUST00000184746	ENSMUSP00000139210	TRANSLATION	protein_coding	start	-	5	191	0	0.7	0	33.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000096788	Rhox2e	ENSMUST00000072167	ENSMUSP00000072030	TRANSLATION	protein_coding	-	CCDS53055.1	5	191	0	1.2	0.5	47.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095601	Rhox3a2	ENSMUST00000184565	ENSMUSP00000139330	TRANSLATION	protein_coding	-	-	5	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095601	Rhox3a2	ENSMUST00000096459	ENSMUSP00000094198	TRANSLATION	protein_coding	-	-	1	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095601	Rhox3a2	ENSMUST00000183543	ENSMUSP00000138828	TRANSLATION	protein_coding	start	-	5	187	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095601	Rhox3a2	ENSMUST00000183901	ENSMUSP00000139263	TRANSLATION	protein_coding	start	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079428	Tceal7	ENSMUST00000113116	ENSMUSP00000108741	TRANSLATION	protein_coding	-	CCDS53193.1	1	98	0	0	7.5	78.8	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000079428	Tceal7	ENSMUST00000126811	ENSMUSP00000122260	TRANSLATION	protein_coding	stop	-	3	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001127	Araf	ENSMUST00000136451	ENSMUSP00000115793	TRANSLATION	nonsense_mediated_decay	-	-	1	419	18	5	0	153.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001127	Araf	ENSMUST00000001155	ENSMUSP00000001155	TRANSLATION	protein_coding	-	CCDS40886.1	1	604	26	11.58	7.5	333.5	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000001127	Araf	ENSMUST00000122850	ENSMUSP00000114846	TRANSLATION	protein_coding	stop	-	5	230	8	4	0	129.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000001127	Araf	ENSMUST00000128250	ENSMUSP00000119544	TRANSLATION	protein_coding	start	-	3	203	4	5.25	0	122.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001127	Araf	ENSMUST00000123219	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001127	Araf	ENSMUST00000150190	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001127	Araf	ENSMUST00000152955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001127	Araf	ENSMUST00000148032	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001127	Araf	ENSMUST00000122312	ENSMUSP00000112521	TRANSLATION	protein_coding	-	CCDS53016.1	1	186	8	4	2.7	129.7	0	-4,-7	-	-	0.786	MINOR
ENSMUSG00000001127	Araf	ENSMUST00000120356	ENSMUSP00000112513	TRANSLATION	protein_coding	-	CCDS53016.1	1	186	8	4	2.7	129.7	0	-4,-7	-	-	0.786	MINOR
ENSMUSG00000073077	Cfap47	ENSMUST00000179788	ENSMUSP00000137161	TRANSLATION	protein_coding	start/stop	-	5	418	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073077	Cfap47	ENSMUST00000199433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073077	Cfap47	ENSMUST00000196318	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073077	Cfap47	ENSMUST00000101410	ENSMUSP00000098956	TRANSLATION	protein_coding	-	-	5	943	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000073077	Cfap47	ENSMUST00000114021	ENSMUSP00000109654	TRANSLATION	protein_coding	-	-	5	360	0	0	0.5	0	0	-4,-7	-	-	0	ALTERNATIVE:2
ENSMUSG00000073077	Cfap47	ENSMUST00000197180	ENSMUSP00000142707	TRANSLATION	protein_coding	-	-	5	3184	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:5
ENSMUSG00000109858	Pfn5	ENSMUST00000210331	ENSMUSP00000148168	TRANSLATION	protein_coding	-	-	-	152	0	0.8	3.4	60.9	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000017057	Il13ra1	ENSMUST00000033418	ENSMUSP00000033418	TRANSLATION	protein_coding	-	CCDS30057.1	1	424	0	7.795	1.5	90.5	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000090546	Cdr1	ENSMUST00000166381	ENSMUSP00000126250	TRANSLATION	protein_coding	-	CCDS53077.1	-	517	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095887	Gm10096	ENSMUST00000180207	ENSMUSP00000136137	TRANSLATION	protein_coding	-	CCDS53031.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095887	Gm10096	ENSMUST00000178672	ENSMUSP00000137544	TRANSLATION	protein_coding	-	CCDS53031.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031430	Vsig1	ENSMUST00000127629	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031430	Vsig1	ENSMUST00000033806	ENSMUSP00000033806	TRANSLATION	protein_coding	-	CCDS30443.1	1	407	0	2.64	0.5	89.3	0	1,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000051361	6030498E09Rik	ENSMUST00000168144	ENSMUSP00000132324	TRANSLATION	protein_coding	-	CCDS40949.1	5	169	0	0	0.5	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000051361	6030498E09Rik	ENSMUST00000050744	ENSMUSP00000061776	TRANSLATION	protein_coding	-	CCDS40949.1	1	169	0	0	0.5	0	1	-4,-1	-	-	0	PRINCIPAL:1
ENSMUSG00000094904	H2al1d	ENSMUST00000178595	ENSMUSP00000137030	TRANSLATION	protein_coding	-	CCDS57731.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095240	Cypt14	ENSMUST00000179096	ENSMUSP00000137274	TRANSLATION	protein_coding	-	CCDS57755.1	1	87	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000101294	Btbd35f15	ENSMUST00000186329	ENSMUSP00000140464	TRANSLATION	protein_coding	-	CCDS72357.1	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079450	Cldn34c1	ENSMUST00000113348	ENSMUSP00000108975	TRANSLATION	protein_coding	-	CCDS53178.1	1	234	0	0	0.5	0	4	-4,0	-	-	0	PRINCIPAL:3
ENSMUSG00000079450	Cldn34c1	ENSMUST00000113343	ENSMUSP00000108970	TRANSLATION	protein_coding	-	CCDS81167.1	1	212	0	0	0.5	0	4	-2,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000079450	Cldn34c1	ENSMUST00000139733	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079450	Cldn34c1	ENSMUST00000149445	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079450	Cldn34c1	ENSMUST00000153946	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079450	Cldn34c1	ENSMUST00000169445	ENSMUSP00000137081	TRANSLATION	protein_coding	-	CCDS53178.1	5	234	0	0	0.5	0	4	-4,0	-	-	0	PRINCIPAL:3
ENSMUSG00000094945	Rhox4a2	ENSMUST00000179915	ENSMUSP00000136542	TRANSLATION	protein_coding	-	-	1	205	0	0.98	0.5	39.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072944	Nup62cl	ENSMUST00000133780	ENSMUSP00000116491	TRANSLATION	protein_coding	stop	-	3	169	0	3	0	108.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072944	Nup62cl	ENSMUST00000154385	ENSMUSP00000121310	TRANSLATION	protein_coding	stop	-	3	228	0	4.43	0	111	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072944	Nup62cl	ENSMUST00000101212	ENSMUSP00000098772	TRANSLATION	protein_coding	-	CCDS53206.1	1	272	0	5.53	1.5	111	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000072944	Nup62cl	ENSMUST00000125678	ENSMUSP00000116128	TRANSLATION	protein_coding	stop	-	5	97	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000072944	Nup62cl	ENSMUST00000124075	ENSMUSP00000122713	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000073176	Zfp449	ENSMUST00000101560	ENSMUSP00000099096	TRANSLATION	protein_coding	-	CCDS30143.1	1	518	28	1.8	7.5	292.8	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000058147	Xlr3c	ENSMUST00000080839	ENSMUSP00000079651	TRANSLATION	protein_coding	-	CCDS30197.1	1	226	0	2.92	1.5	109.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079435	Rpl36a	ENSMUST00000149857	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079435	Rpl36a	ENSMUST00000113211	ENSMUSP00000108837	TRANSLATION	protein_coding	-	CCDS41123.1	1	106	2	2.58	19.5	137.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000079435	Rpl36a	ENSMUST00000169457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079435	Rpl36a	ENSMUST00000170828	ENSMUSP00000126110	TRANSLATION	nonsense_mediated_decay	-	-	2	67	2	0.8	0	29.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079435	Rpl36a	ENSMUST00000152266	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079435	Rpl36a	ENSMUST00000172023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000053593	Fate1	ENSMUST00000066116	ENSMUSP00000065715	TRANSLATION	protein_coding	-	-	1	99	0	0	0	31.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000053593	Fate1	ENSMUST00000137031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053593	Fate1	ENSMUST00000114569	ENSMUSP00000110216	TRANSLATION	protein_coding	-	-	5	99	0	0	0	31.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071773	Rhox1	ENSMUST00000115210	ENSMUSP00000110865	TRANSLATION	protein_coding	-	CCDS40929.1	1	224	0	1.2	0.5	50.4	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073069	Mageb2	ENSMUST00000201779	ENSMUSP00000144620	TRANSLATION	protein_coding	-	CCDS81151.1	1	330	0	0.8	0.5	0	0	-4,-2	-	-	6	PRINCIPAL:2
ENSMUSG00000073069	Mageb2	ENSMUST00000101397	ENSMUSP00000098945	TRANSLATION	protein_coding	-	-	-	380	0	0.8	0.5	0	0	-4,0	-	-	6	ALTERNATIVE:2
ENSMUSG00000034403	Pja1	ENSMUST00000113797	ENSMUSP00000109428	TRANSLATION	protein_coding	-	CCDS41071.1	2	395	8	0.6	0.5	39.2	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000034403	Pja1	ENSMUST00000113792	ENSMUSP00000109423	TRANSLATION	protein_coding	-	CCDS41070.1	5	578	8	0.6	0.5	39.2	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000034403	Pja1	ENSMUST00000113790	ENSMUSP00000109421	TRANSLATION	protein_coding	-	CCDS81157.1	2	398	8	0.6	0.5	39.2	0	-4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000034403	Pja1	ENSMUST00000167246	ENSMUSP00000132393	TRANSLATION	protein_coding	-	CCDS41070.1	1	578	8	0.6	0.5	39.2	0	-4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000034403	Pja1	ENSMUST00000036354	ENSMUSP00000109420	TRANSLATION	protein_coding	-	CCDS41070.1	1	578	8	0.6	0.5	39.2	0	-4,-1	-	-	18	PRINCIPAL:3
ENSMUSG00000001128	Cfp	ENSMUST00000122862	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001128	Cfp	ENSMUST00000001156	ENSMUSP00000001156	TRANSLATION	protein_coding	-	CCDS30047.1	1	464	3	8	2.7	251.2	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031391	L1cam	ENSMUST00000129612	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000102871	ENSMUSP00000099935	TRANSLATION	protein_coding	-	CCDS30215.1	1	1259	0	19.39	1.5	518.8	0	2,-3	-	-	11.76	PRINCIPAL:2
ENSMUSG00000031391	L1cam	ENSMUST00000066576	ENSMUSP00000068135	TRANSLATION	protein_coding	-	-	5	1250	0	19.39	1.5	522.8	0	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000031391	L1cam	ENSMUST00000135104	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000155246	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000124560	ENSMUSP00000115923	TRANSLATION	protein_coding	start	-	5	145	0	0	0	85.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031391	L1cam	ENSMUST00000144478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000148250	ENSMUSP00000114609	TRANSLATION	protein_coding	start/stop	-	5	190	0	3.81	0	84.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031391	L1cam	ENSMUST00000141221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031391	L1cam	ENSMUST00000145805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000130110	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031391	L1cam	ENSMUST00000114430	ENSMUSP00000110073	TRANSLATION	protein_coding	-	-	5	1255	0	19.39	1.5	522.8	0	2,-3	-	-	12	ALTERNATIVE:2
ENSMUSG00000031391	L1cam	ENSMUST00000146790	ENSMUSP00000121797	TRANSLATION	protein_coding	stop	-	5	83	0	1.78	0	31.7	0	2,-3	-	-	-1	MINOR
ENSMUSG00000060090	Rp2	ENSMUST00000033372	ENSMUSP00000033372	TRANSLATION	protein_coding	-	CCDS30041.1	1	347	0	4.53	7.5	177.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060090	Rp2	ENSMUST00000134349	ENSMUSP00000138352	TRANSLATION	nonsense_mediated_decay	-	-	1	369	0	3.78	0	177.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060090	Rp2	ENSMUST00000133619	ENSMUSP00000138724	TRANSLATION	nonsense_mediated_decay	-	-	1	322	0	3.78	0	177.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000060090	Rp2	ENSMUST00000115391	ENSMUSP00000111049	TRANSLATION	protein_coding	-	CCDS30041.1	1	347	0	4.53	7.5	177.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060090	Rp2	ENSMUST00000115387	ENSMUSP00000111045	TRANSLATION	protein_coding	-	CCDS72346.1	1	310	0	3.5	1.7	177.8	0	-4,-5	-	-	10.266	MINOR
ENSMUSG00000025525	Apool	ENSMUST00000154378	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025525	Apool	ENSMUST00000113415	ENSMUSP00000109042	TRANSLATION	protein_coding	-	CCDS85799.1	5	192	0	0	0.5	112.1	0	-4,-6	-	-	5.358	MINOR
ENSMUSG00000025525	Apool	ENSMUST00000026599	ENSMUSP00000026599	TRANSLATION	protein_coding	-	CCDS30359.1	1	265	0	0	1.5	122.8	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000041710	Trpc5	ENSMUST00000040184	ENSMUSP00000049063	TRANSLATION	protein_coding	-	CCDS30457.1	1	975	0	0.66	7.5	238.4	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000041710	Trpc5	ENSMUST00000148240	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046180	4930550L24Rik	ENSMUST00000118305	ENSMUSP00000113812	TRANSLATION	protein_coding	-	CCDS40985.1	3	320	0	0.6	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046180	4930550L24Rik	ENSMUST00000062542	ENSMUSP00000051134	TRANSLATION	protein_coding	-	CCDS40985.1	1	320	0	0.6	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000118429	Btbd35f9	ENSMUST00000238632	ENSMUSP00000158591	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	41.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051851	Rtl8c	ENSMUST00000063384	ENSMUSP00000069901	TRANSLATION	protein_coding	-	CCDS40975.1	-	112	0	0	2.9	200.6	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000096072	Gm8914	ENSMUST00000101396	ENSMUSP00000098944	TRANSLATION	protein_coding	-	-	-	344	0	0.6	1.5	51.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025527	Satl1	ENSMUST00000124335	ENSMUSP00000122770	TRANSLATION	protein_coding	start	-	1	433	18	3.6	0	43.6	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000025527	Satl1	ENSMUST00000026601	ENSMUSP00000026601	TRANSLATION	protein_coding	-	CCDS53173.1	1	744	18	3.6	0.5	43.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031409	Tceal6	ENSMUST00000033783	ENSMUSP00000033783	TRANSLATION	protein_coding	-	CCDS30402.1	1	200	0	0	2.7	125.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000033792	Atp7a	ENSMUST00000134363	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033792	Atp7a	ENSMUST00000055941	ENSMUSP00000058840	TRANSLATION	protein_coding	-	CCDS53169.1	1	1492	6	17.6	1.5	385.7	6	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000033792	Atp7a	ENSMUST00000113557	ENSMUSP00000109186	TRANSLATION	protein_coding	-	CCDS41097.1	1	1491	6	17.6	1.5	385.7	6	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000033792	Atp7a	ENSMUST00000133875	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031330	Zcchc13	ENSMUST00000033692	ENSMUSP00000033692	TRANSLATION	protein_coding	-	CCDS30329.1	-	170	28	0.2	1.5	207.7	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000036769	Wdr44	ENSMUST00000149483	ENSMUSP00000116260	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036769	Wdr44	ENSMUST00000142600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036769	Wdr44	ENSMUST00000135445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036769	Wdr44	ENSMUST00000101670	ENSMUSP00000099193	TRANSLATION	protein_coding	-	CCDS40892.1	1	915	0	5.77	1.5	76.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036769	Wdr44	ENSMUST00000035766	ENSMUSP00000044616	TRANSLATION	protein_coding	-	CCDS40892.1	1	915	0	5.77	1.5	76.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000078324	Btbd35f14	ENSMUST00000105117	ENSMUSP00000100749	TRANSLATION	protein_coding	-	CCDS53046.1	-	498	0	0	0.5	41.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000036699	Zcchc12	ENSMUST00000048067	ENSMUSP00000044550	TRANSLATION	protein_coding	-	CCDS30058.1	1	402	4	0	3.9	149.2	0	-4,0	-	-	11	PRINCIPAL:1
ENSMUSG00000036699	Zcchc12	ENSMUST00000115257	ENSMUSP00000110912	TRANSLATION	protein_coding	-	CCDS30058.1	5	402	4	0	3.9	149.2	0	-4,0	-	-	11	PRINCIPAL:1
ENSMUSG00000036699	Zcchc12	ENSMUST00000115258	ENSMUSP00000110913	TRANSLATION	protein_coding	-	CCDS30058.1	1	402	4	0	3.9	149.2	0	-4,0	-	-	11	PRINCIPAL:1
ENSMUSG00000036699	Zcchc12	ENSMUST00000115256	ENSMUSP00000110911	TRANSLATION	protein_coding	-	CCDS30058.1	2	402	4	0	3.9	149.2	0	-4,0	-	-	11	PRINCIPAL:1
ENSMUSG00000033965	Slc16a2	ENSMUST00000148684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033965	Slc16a2	ENSMUST00000171837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033965	Slc16a2	ENSMUST00000042664	ENSMUSP00000037629	TRANSLATION	protein_coding	-	CCDS30330.1	1	545	0	0	1.5	79.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000101818	Gm28269	ENSMUST00000189511	ENSMUSP00000141034	TRANSLATION	protein_coding	-	-	3	125	0	0	0.5	0	0	0,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036985	Zdhhc9	ENSMUST00000088935	ENSMUSP00000086325	TRANSLATION	protein_coding	-	CCDS40960.1	1	364	8	0	6.3	127.6	4	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000036985	Zdhhc9	ENSMUST00000127440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036985	Zdhhc9	ENSMUST00000123054	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036985	Zdhhc9	ENSMUST00000132652	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036985	Zdhhc9	ENSMUST00000149416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036985	Zdhhc9	ENSMUST00000037960	ENSMUSP00000044734	TRANSLATION	protein_coding	-	CCDS40960.1	1	364	8	0	6.3	127.6	4	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000072945	Ripply1	ENSMUST00000101217	ENSMUSP00000098778	TRANSLATION	protein_coding	-	CCDS30436.1	1	201	0	0	0.5	113.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000035491	Fthl17a	ENSMUST00000048382	ENSMUSP00000045007	TRANSLATION	protein_coding	-	CCDS53125.1	1	182	0	1	1.5	87.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095510	Rhox3f	ENSMUST00000185008	ENSMUSP00000138815	TRANSLATION	protein_coding	start	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095510	Rhox3f	ENSMUST00000183696	ENSMUSP00000139277	TRANSLATION	protein_coding	start	-	5	205	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095510	Rhox3f	ENSMUST00000115172	ENSMUSP00000110826	TRANSLATION	protein_coding	-	CCDS53058.1	1	215	0	1.6	0.5	45	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095510	Rhox3f	ENSMUST00000184451	ENSMUSP00000138833	TRANSLATION	protein_coding	-	CCDS53058.1	5	215	0	1.6	0.5	45	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000059690	1700020N15Rik	ENSMUST00000075654	ENSMUSP00000075079	TRANSLATION	protein_coding	-	CCDS57758.1	1	112	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031105	Slc25a14	ENSMUST00000033431	ENSMUSP00000033431	TRANSLATION	protein_coding	-	CCDS30112.1	1	322	15	5.75	7.5	221.6	0	3,-2	-	-	20.064	MINOR
ENSMUSG00000031105	Slc25a14	ENSMUST00000150221	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031105	Slc25a14	ENSMUST00000134757	ENSMUSP00000114655	TRANSLATION	nonsense_mediated_decay	-	-	1	35	0	0	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000031105	Slc25a14	ENSMUST00000114936	ENSMUSP00000110586	TRANSLATION	protein_coding	-	CCDS53066.1	5	325	15	5.75	7.5	221.6	0	3,-2	-	-	20.064	MINOR
ENSMUSG00000031105	Slc25a14	ENSMUST00000134257	ENSMUSP00000120332	TRANSLATION	protein_coding	-	CCDS72376.1	5	290	15	5.75	13.6	221.6	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000031105	Slc25a14	ENSMUST00000128773	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031105	Slc25a14	ENSMUST00000153047	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031105	Slc25a14	ENSMUST00000177710	ENSMUSP00000136140	TRANSLATION	protein_coding	-	CCDS53066.1	1	325	15	5.75	7.5	221.6	0	3,-2	-	-	20.064	MINOR
ENSMUSG00000095180	Rhox5	ENSMUST00000184866	ENSMUSP00000139179	TRANSLATION	protein_coding	start	-	1	213	0	0.7	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095180	Rhox5	ENSMUST00000179626	ENSMUSP00000137526	TRANSLATION	protein_coding	-	CCDS57752.1	1	210	0	0.7	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000038344	Txlng	ENSMUST00000041370	ENSMUSP00000038615	TRANSLATION	protein_coding	-	CCDS30510.1	1	524	0	0	0.5	384.1	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000038344	Txlng	ENSMUST00000112316	ENSMUSP00000107935	TRANSLATION	protein_coding	-	CCDS72463.1	1	475	0	0	0.5	384.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000038344	Txlng	ENSMUST00000131463	-	NO_TRANSLATION	retained_intron
ENSMUSG00000038344	Txlng	ENSMUST00000112314	ENSMUSP00000107933	TRANSLATION	protein_coding	-	-	2	202	0	0	0	178.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038344	Txlng	ENSMUST00000112315	ENSMUSP00000107934	TRANSLATION	protein_coding	-	CCDS81194.1	1	241	0	0	0.5	178.5	0	-4,-5	-	-	0	MINOR
ENSMUSG00000038344	Txlng	ENSMUST00000150080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071722	Spin4	ENSMUST00000096367	ENSMUSP00000094095	TRANSLATION	protein_coding	-	CCDS30282.1	-	249	0	1	7.5	228.6	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031242	2610002M06Rik	ENSMUST00000120722	ENSMUSP00000113588	TRANSLATION	protein_coding	-	CCDS53171.1	1	199	0	1.75	17.5	57.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031242	2610002M06Rik	ENSMUST00000191183	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005696	Sh2d1a	ENSMUST00000129855	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005696	Sh2d1a	ENSMUST00000153948	ENSMUSP00000138624	TRANSLATION	protein_coding	start	-	3	93	0	1.511	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000005696	Sh2d1a	ENSMUST00000101619	-	NO_TRANSLATION	retained_intron
ENSMUSG00000005696	Sh2d1a	ENSMUST00000189753	ENSMUSP00000141070	TRANSLATION	protein_coding	-	CCDS30099.1	5	126	0	3.481	7.5	53	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000005696	Sh2d1a	ENSMUST00000128393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005696	Sh2d1a	ENSMUST00000115070	ENSMUSP00000110722	TRANSLATION	protein_coding	-	CCDS85770.1	1	123	0	3.481	1.5	40	0	-4,-5	-	-	10.761	MINOR
ENSMUSG00000005696	Sh2d1a	ENSMUST00000005839	ENSMUSP00000005839	TRANSLATION	protein_coding	-	CCDS30099.1	1	126	0	3.481	7.5	53	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000043929	Klhl15	ENSMUST00000170594	ENSMUSP00000129734	TRANSLATION	protein_coding	-	CCDS30278.1	1	604	0	1.5	19.5	230.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043929	Klhl15	ENSMUST00000113915	ENSMUSP00000109548	TRANSLATION	protein_coding	-	CCDS30278.1	1	604	0	1.5	19.5	230.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043929	Klhl15	ENSMUST00000113908	ENSMUSP00000109541	TRANSLATION	protein_coding	-	CCDS41062.1	1	237	0	1.08	0.5	144.3	0	-4,-5	-	-	5.136	MINOR
ENSMUSG00000043929	Klhl15	ENSMUST00000113916	ENSMUSP00000109549	TRANSLATION	protein_coding	-	CCDS30278.1	1	604	0	1.5	19.5	230.7	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000043929	Klhl15	ENSMUST00000150999	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000043929	Klhl15	ENSMUST00000142691	-	NO_TRANSLATION	retained_intron
ENSMUSG00000043929	Klhl15	ENSMUST00000153900	ENSMUSP00000120863	TRANSLATION	protein_coding	stop	-	3	106	0	0.64	0	74.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000043929	Klhl15	ENSMUST00000113911	ENSMUSP00000109544	TRANSLATION	protein_coding	-	CCDS41062.1	1	237	0	1.08	0.5	144.3	0	-4,-5	-	-	5.136	MINOR
ENSMUSG00000043929	Klhl15	ENSMUST00000096369	ENSMUSP00000094097	TRANSLATION	protein_coding	-	CCDS30279.1	1	248	0	1.08	0.5	145	0	-4,-5	-	-	5.178	MINOR
ENSMUSG00000049191	Rtl5	ENSMUST00000113631	ENSMUSP00000109261	TRANSLATION	protein_coding	-	CCDS30320.1	-	599	0	0	0.5	44.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000049191	Rtl5	ENSMUST00000119076	ENSMUSP00000133001	TRANSLATION	nonsense_mediated_decay	-	-	1	599	0	0	0.5	44.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049191	Rtl5	ENSMUST00000139878	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049191	Rtl5	ENSMUST00000188731	ENSMUSP00000139504	TRANSLATION	protein_coding	-	CCDS30320.1	1	599	0	0	0.5	44.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016382	Pls3	ENSMUST00000114059	ENSMUSP00000109693	TRANSLATION	protein_coding	-	CCDS30243.1	1	630	13	13.85	7.5	338.3	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000016382	Pls3	ENSMUST00000126599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016382	Pls3	ENSMUST00000033547	ENSMUSP00000033547	TRANSLATION	protein_coding	-	CCDS30243.1	1	630	13	13.85	7.5	338.3	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000016382	Pls3	ENSMUST00000114057	ENSMUSP00000109691	TRANSLATION	protein_coding	-	CCDS30243.1	1	630	13	13.85	7.5	338.3	0	-4,-5	-	-	20.604	PRINCIPAL:1
ENSMUSG00000016382	Pls3	ENSMUST00000137192	ENSMUSP00000118995	TRANSLATION	protein_coding	stop	-	5	629	13	13.85	7.5	338.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016382	Pls3	ENSMUST00000114058	ENSMUSP00000109692	TRANSLATION	protein_coding	-	CCDS85786.1	5	639	13	14.048	3.9	328.3	0	-4,-5	-	-	18.738	MINOR
ENSMUSG00000109156	Gm45194	ENSMUST00000207546	ENSMUSP00000146668	TRANSLATION	protein_coding	stop	-	5	190	0	1.25	0	71.9	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000109156	Gm45194	ENSMUST00000207962	ENSMUSP00000147202	TRANSLATION	protein_coding,RT	stop	-	5	572	0	3.35	0	68.2	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000118402	Btbd35f22	ENSMUST00000238528	ENSMUSP00000158732	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000105993	Tex13c2	ENSMUST00000197237	ENSMUSP00000143486	TRANSLATION	protein_coding	-	-	-	530	4	0	0.5	182.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000034555	Tex16	ENSMUST00000131304	ENSMUSP00000117689	TRANSLATION	protein_coding	start/stop	-	5	149	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000034555	Tex16	ENSMUST00000038546	ENSMUSP00000048187	TRANSLATION	protein_coding	-	CCDS30358.1	1	1139	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000034555	Tex16	ENSMUST00000130247	ENSMUSP00000118847	TRANSLATION	protein_coding	start	-	1	1150	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041020	Map7d2	ENSMUST00000043151	ENSMUSP00000046693	TRANSLATION	protein_coding	-	CCDS85824.1	1	597	0	0	0.5	153.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000041020	Map7d2	ENSMUST00000145142	ENSMUSP00000122106	TRANSLATION	protein_coding	stop	-	1	402	0	0	0	110.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041020	Map7d2	ENSMUST00000156172	ENSMUSP00000119132	TRANSLATION	protein_coding	stop	-	1	74	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041020	Map7d2	ENSMUST00000112471	ENSMUSP00000108090	TRANSLATION	protein_coding	-	CCDS41193.1	5	781	0	0	0.5	153.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000041020	Map7d2	ENSMUST00000112470	ENSMUSP00000108089	TRANSLATION	protein_coding	-	CCDS85823.1	1	296	0	0	0.5	61.1	0	-4,-7	-	-	0.462	MINOR
ENSMUSG00000078218	Btbd35f3	ENSMUST00000140300	ENSMUSP00000117303	TRANSLATION	protein_coding	-	CCDS72327.1	-	496	0	0	0.5	45.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051038	Rhox11	ENSMUST00000054147	ENSMUSP00000052929	TRANSLATION	protein_coding	-	CCDS30086.1	1	206	0	0.9	0.5	57.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079536	Ctag2l1	ENSMUST00000114125	ENSMUSP00000109760	TRANSLATION	protein_coding	stop	CCDS85785.1	5	208	0	0	1.5	49.2	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000067597	Dgat2l6	ENSMUST00000037541	ENSMUSP00000036845	TRANSLATION	protein_coding	-	CCDS53147.1	5	337	0	0	5.1	364.1	0	-3,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000067597	Dgat2l6	ENSMUST00000140551	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067764	Xlr5c	ENSMUST00000114503	ENSMUSP00000110147	TRANSLATION	protein_coding	-	-	1	236	0	3.1	1.5	127	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067764	Xlr5c	ENSMUST00000088450	ENSMUSP00000085796	TRANSLATION	protein_coding	-	CCDS30198.1	1	179	0	2.2	0.5	104	0	-4,-5	-	-	8.82	MINOR
ENSMUSG00000062564	Tex28	ENSMUST00000114328	ENSMUSP00000109967	TRANSLATION	protein_coding	-	CCDS53106.1	5	409	0	0	1.5	233.9	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000062564	Tex28	ENSMUST00000078060	ENSMUSP00000077207	TRANSLATION	protein_coding	-	CCDS53106.1	5	409	0	0	1.5	233.9	2	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031012	Cask	ENSMUST00000033321	ENSMUSP00000033321	TRANSLATION	protein_coding	-	-	5	908	37	17.015	1.2	640.9	0	-4,-5	-	-	17.8	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000115436	ENSMUSP00000111096	TRANSLATION	protein_coding	-	CCDS40878.1	2	897	37	17.14	12.8	640.9	0	-4,-5	-	-	21.084	PRINCIPAL:3
ENSMUSG00000031012	Cask	ENSMUST00000124710	ENSMUSP00000119584	TRANSLATION	protein_coding	stop	-	5	155	17	5.24	0	116.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000152358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031012	Cask	ENSMUST00000128012	ENSMUSP00000114187	TRANSLATION	protein_coding	start/stop	-	5	249	3	5.36	0	139.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000128095	ENSMUSP00000122664	TRANSLATION	protein_coding	start	-	5	191	20	3.698	0	204.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000132240	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031012	Cask	ENSMUST00000139735	ENSMUSP00000117862	TRANSLATION	protein_coding	start/stop	-	5	282	17	4.68	0	227.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000115435	ENSMUSP00000111095	TRANSLATION	protein_coding	-	-	3	111	0	1.75	0	47.5	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031012	Cask	ENSMUST00000155989	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031012	Cask	ENSMUST00000115438	ENSMUSP00000111098	TRANSLATION	protein_coding	-	CCDS72343.1	1	920	37	16.765	16.3	640.9	0	-4,-5	-	-	21.25	ALTERNATIVE:1
ENSMUSG00000031012	Cask	ENSMUST00000156096	ENSMUSP00000120299	TRANSLATION	protein_coding	start	-	5	871	31	16.06	0	622.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040586	Ofd1	ENSMUST00000049501	ENSMUSP00000041744	TRANSLATION	protein_coding	-	CCDS53248.1	1	1019	0	0	0.5	53.1	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000031394	Opn1mw	ENSMUST00000123401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031394	Opn1mw	ENSMUST00000135307	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031394	Opn1mw	ENSMUST00000101457	ENSMUSP00000099000	TRANSLATION	protein_coding	-	-	1	389	15	4.652	0	134.3	10	-4,-5	-	-	16.866	MINOR
ENSMUSG00000031394	Opn1mw	ENSMUST00000145443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031394	Opn1mw	ENSMUST00000033771	ENSMUSP00000033771	TRANSLATION	protein_coding	-	CCDS30220.1	1	359	15	5.22	1.5	134.3	10	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031394	Opn1mw	ENSMUST00000127445	ENSMUSP00000118631	TRANSLATION	protein_coding	start	-	3	164	7	2.8	0	61	3	-2,-5	-	-	-1	MINOR
ENSMUSG00000031382	Asb11	ENSMUST00000134085	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031382	Asb11	ENSMUST00000036858	ENSMUSP00000044637	TRANSLATION	protein_coding	-	CCDS85827.1	1	323	0	5.75	6.5	138.6	0	-4,-5	-	-	13.358	PRINCIPAL:1
ENSMUSG00000031382	Asb11	ENSMUST00000033755	ENSMUSP00000033755	TRANSLATION	protein_coding	-	CCDS30523.1	1	294	0	6.07	1.5	138.6	0	-4,-5	-	-	12.182	MINOR
ENSMUSG00000031314	Taf1	ENSMUST00000129487	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031314	Taf1	ENSMUST00000143908	ENSMUSP00000138159	TRANSLATION	nonsense_mediated_decay	-	-	5	1733	0	34.75	0	817.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031314	Taf1	ENSMUST00000101341	ENSMUSP00000098895	TRANSLATION	protein_coding	-	-	2	1902	0	36.46	0	817.8	0	-4,-5	-	-	9.42	MINOR
ENSMUSG00000031314	Taf1	ENSMUST00000149274	ENSMUSP00000114765	TRANSLATION	protein_coding	-	CCDS85793.1	5	1893	0	37.75	2.7	817.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031314	Taf1	ENSMUST00000211461	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031314	Taf1	ENSMUST00000140470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031314	Taf1	ENSMUST00000118878	ENSMUSP00000112772	TRANSLATION	protein_coding	-	-	5	1870	0	37	1.7	817.8	0	-4,-5	-	-	10.5	MINOR
ENSMUSG00000079694	Gm14862	ENSMUST00000115553	ENSMUSP00000111215	TRANSLATION	protein_coding	-	-	1	81	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000042750	Bex2	ENSMUST00000049130	ENSMUSP00000043113	TRANSLATION	protein_coding	-	CCDS30413.1	1	129	0	0	6.3	69.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000086316	Nbdy	ENSMUST00000149514	ENSMUSP00000145010	TRANSLATION	protein_coding	-	-	2	68	0	0	6	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000086316	Nbdy	ENSMUST00000155617	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000086316	Nbdy	ENSMUST00000140575	ENSMUSP00000144699	TRANSLATION	protein_coding	-	-	1	68	0	0	6	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000086316	Nbdy	ENSMUST00000208373	ENSMUSP00000146758	TRANSLATION	protein_coding	-	-	5	68	0	0	6	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000086316	Nbdy	ENSMUST00000185492	ENSMUSP00000144860	TRANSLATION	protein_coding	-	-	1	68	0	0	6	0	0	-4,-5	-	-	2	PRINCIPAL:1
ENSMUSG00000086316	Nbdy	ENSMUST00000208235	ENSMUSP00000147221	TRANSLATION	protein_coding	-	CCDS85820.1	2	43	0	0	0.5	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000004317	Clcn5	ENSMUST00000115746	ENSMUSP00000111412	TRANSLATION	protein_coding	-	CCDS57727.1	5	816	0	5.84	5.3	422.4	13	-4,-7	-	-	13.986	ALTERNATIVE:1
ENSMUSG00000004317	Clcn5	ENSMUST00000004428	ENSMUSP00000004428	TRANSLATION	protein_coding	-	CCDS29963.1	1	746	0	5.84	7.5	422.4	13	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000004317	Clcn5	ENSMUST00000132126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004317	Clcn5	ENSMUST00000154382	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004317	Clcn5	ENSMUST00000128319	ENSMUSP00000122555	TRANSLATION	protein_coding	stop	-	5	223	0	0	0	0	3	-4,-7	-	-	-1	MINOR
ENSMUSG00000025531	Chm	ENSMUST00000113388	ENSMUSP00000109015	TRANSLATION	protein_coding	-	-	1	623	0	12.2	0	145.7	0	-4,-5	-	-	7.398	MINOR
ENSMUSG00000025531	Chm	ENSMUST00000133469	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025531	Chm	ENSMUST00000026607	ENSMUSP00000026607	TRANSLATION	protein_coding	-	CCDS41107.1	1	662	0	13.2	0.5	189.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025531	Chm	ENSMUST00000153417	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025531	Chm	ENSMUST00000135821	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072955	Tmsb15l	ENSMUST00000127404	ENSMUSP00000118704	TRANSLATION	protein_coding,RT	-	CCDS53197.1	2	80	0	1.93	0.5	118.7	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000043569	Cldn34c4	ENSMUST00000052500	ENSMUSP00000062601	TRANSLATION	protein_coding	-	CCDS59775.1	1	212	0	0.28	1.5	29.7	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036959	Bcorl1	ENSMUST00000136348	ENSMUSP00000122000	TRANSLATION	protein_coding	-	CCDS40961.1	5	1781	0	4.38	0.5	218.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036959	Bcorl1	ENSMUST00000142160	ENSMUSP00000117056	TRANSLATION	protein_coding	start/stop	-	5	746	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036959	Bcorl1	ENSMUST00000156042	ENSMUSP00000117693	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036959	Bcorl1	ENSMUST00000156703	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036959	Bcorl1	ENSMUST00000114972	ENSMUSP00000110623	TRANSLATION	protein_coding	start	-	5	1693	0	4.1	0	215.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036959	Bcorl1	ENSMUST00000037596	ENSMUSP00000039898	TRANSLATION	protein_coding	-	CCDS40961.1	5	1781	0	4.38	0.5	218.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079584	Gm364	ENSMUST00000114725	ENSMUSP00000110373	TRANSLATION	protein_coding	-	CCDS53076.1	2	671	0	0	0.5	516.4	0	0,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000042595	Fam199x	ENSMUST00000047852	ENSMUSP00000045544	TRANSLATION	protein_coding	-	CCDS30428.1	1	388	0	0	6.5	671.2	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031373	Car5b	ENSMUST00000126650	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031373	Car5b	ENSMUST00000033739	ENSMUSP00000033739	TRANSLATION	protein_coding	-	CCDS30515.1	1	317	6	5.75	3.9	293.8	0	-4,0	-	-	19	PRINCIPAL:1
ENSMUSG00000072930	Gm15107	ENSMUST00000112796	ENSMUSP00000108416	TRANSLATION	protein_coding	-	CCDS53211.1	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000009941	Nxf2	ENSMUST00000143059	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009941	Nxf2	ENSMUST00000010085	ENSMUSP00000010085	TRANSLATION	protein_coding	-	CCDS72433.1	1	691	0	12.846	0.5	238.5	0	-4,-6	-	-	11.64	ALTERNATIVE:2
ENSMUSG00000009941	Nxf2	ENSMUST00000113189	ENSMUSP00000108814	TRANSLATION	protein_coding	-	CCDS41125.1	1	685	0	12.714	0.5	244.5	0	-4,-6	-	-	11.736	PRINCIPAL:3
ENSMUSG00000009941	Nxf2	ENSMUST00000113187	ENSMUSP00000108812	TRANSLATION	protein_coding	-	CCDS81173.1	1	671	0	12.714	0.5	244.5	0	-4,-5	-	-	11.736	ALTERNATIVE:2
ENSMUSG00000037315	Jade3	ENSMUST00000115384	ENSMUSP00000111042	TRANSLATION	protein_coding	-	CCDS30042.2	1	824	11	2.4	3.9	191.4	0	-4,-7	-	-	18.994	PRINCIPAL:2
ENSMUSG00000037315	Jade3	ENSMUST00000224892	ENSMUSP00000153028	TRANSLATION	nonsense_mediated_decay	-	-	-	122	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000037315	Jade3	ENSMUST00000136093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037315	Jade3	ENSMUST00000043693	ENSMUSP00000048529	TRANSLATION	protein_coding	-	-	1	823	11	2.4	3.9	191.5	0	-4,-6	-	-	19	ALTERNATIVE:2
ENSMUSG00000118409	Btbd35f5	ENSMUST00000178747	ENSMUSP00000136615	TRANSLATION	protein_coding	-	CCDS53040.1	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000067971	Olfr1321	ENSMUST00000088876	ENSMUSP00000086263	TRANSLATION	protein_coding	-	CCDS30117.1	-	319	0	0.3	0.5	177.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067971	Olfr1321	ENSMUST00000216611	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067971	Olfr1321	ENSMUST00000215373	ENSMUSP00000149462	TRANSLATION	protein_coding	-	CCDS30117.1	5	319	0	0.3	0.5	177.8	7	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067971	Olfr1321	ENSMUST00000215918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041700	Lhfpl1	ENSMUST00000123443	ENSMUSP00000114442	TRANSLATION	protein_coding	stop	-	3	33	0	0	0	0	0	0,-4	-	-	-1	MINOR
ENSMUSG00000041700	Lhfpl1	ENSMUST00000040084	ENSMUSP00000044054	TRANSLATION	protein_coding	-	CCDS30458.1	1	220	0	0	6.3	192.7	0	0,-4	-	-	8	PRINCIPAL:1
ENSMUSG00000060726	Tmsb15a	ENSMUST00000073674	ENSMUSP00000073355	TRANSLATION	protein_coding	-	CCDS41130.1	1	45	0	1.33	7.1	65.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000060726	Tmsb15a	ENSMUST00000113154	ENSMUSP00000108779	TRANSLATION	protein_coding	-	-	5	79	0	1.33	0.5	65.5	0	-4,-6	-	-	12	MINOR
ENSMUSG00000073006	Gm732	ENSMUST00000155294	ENSMUSP00000114213	TRANSLATION	protein_coding	start/stop	-	2	156	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073006	Gm732	ENSMUST00000101290	ENSMUSP00000098848	TRANSLATION	protein_coding	-	CCDS30352.1	1	516	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031220	Awat2	ENSMUST00000147103	ENSMUSP00000128516	TRANSLATION	protein_coding	-	CCDS72412.1	1	282	0	0	0.5	340	0	-4,-2	-	-	5.256	MINOR
ENSMUSG00000031220	Awat2	ENSMUST00000033567	ENSMUSP00000033567	TRANSLATION	protein_coding	-	CCDS30300.1	1	333	0	0	5.1	352.4	0	-3,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000095872	Gm15128	ENSMUST00000112814	ENSMUSP00000108433	TRANSLATION	protein_coding	-	-	1	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095872	Gm15128	ENSMUST00000178833	ENSMUSP00000136038	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031059	Ndufb11	ENSMUST00000116621	ENSMUSP00000112320	TRANSLATION	protein_coding	-	CCDS53012.1	1	151	0	3	6.3	154.7	0	-3,1	-	-	14	PRINCIPAL:1
ENSMUSG00000073257	Gm10488	ENSMUST00000101657	ENSMUSP00000099180	TRANSLATION	protein_coding	-	CCDS53032.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061273	Mmgt1	ENSMUST00000059899	ENSMUSP00000051621	TRANSLATION	protein_coding	-	CCDS30147.1	1	131	0	0	12.8	0	0	2,-2	-	-	4	PRINCIPAL:1
ENSMUSG00000059663	Samt2b	ENSMUST00000082357	ENSMUSP00000080966	TRANSLATION	protein_coding	-	CCDS57783.1	1	233	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000043463	Rab9b	ENSMUST00000058814	ENSMUSP00000049739	TRANSLATION	protein_coding	-	CCDS30425.1	1	201	19	1	21.5	190.9	0	-3,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000031403	Dkc1	ENSMUST00000154936	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031403	Dkc1	ENSMUST00000033776	ENSMUSP00000033776	TRANSLATION	protein_coding	-	CCDS41029.1	1	509	2	10.91	0.5	314.9	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031403	Dkc1	ENSMUST00000135389	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031403	Dkc1	ENSMUST00000154422	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031403	Dkc1	ENSMUST00000137286	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031403	Dkc1	ENSMUST00000145222	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031403	Dkc1	ENSMUST00000131155	ENSMUSP00000120441	TRANSLATION	protein_coding	stop	-	5	260	2	6.66	0	174	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031403	Dkc1	ENSMUST00000132000	ENSMUSP00000121957	TRANSLATION	protein_coding	stop	-	3	145	1	2.75	0	108.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031403	Dkc1	ENSMUST00000140609	ENSMUSP00000117706	TRANSLATION	nonsense_mediated_decay	start	-	5	184	1	3.5	0	156.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031403	Dkc1	ENSMUST00000153844	ENSMUSP00000121253	TRANSLATION	nonsense_mediated_decay	start	-	5	74	0	1.83	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031403	Dkc1	ENSMUST00000131867	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031403	Dkc1	ENSMUST00000151327	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057402	Cldn34b2	ENSMUST00000076671	ENSMUSP00000075967	TRANSLATION	protein_coding	-	CCDS53232.1	1	209	0	0.2	1.5	45.2	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000095413	H2al1e	ENSMUST00000178979	ENSMUSP00000136763	TRANSLATION	protein_coding	-	CCDS40866.1	-	105	0	0.8	0.5	41.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001173	Ocrl	ENSMUST00000146486	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001173	Ocrl	ENSMUST00000142719	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001173	Ocrl	ENSMUST00000115020	ENSMUSP00000110672	TRANSLATION	protein_coding	-	-	1	727	7	16.31	0	190.7	0	-4,-5	-	-	6.234	MINOR
ENSMUSG00000001173	Ocrl	ENSMUST00000115013	ENSMUSP00000110665	TRANSLATION	protein_coding	-	-	1	182	0	4.75	0	96.1	0	-4,-5	-	-	0	MINOR
ENSMUSG00000001173	Ocrl	ENSMUST00000154732	ENSMUSP00000122084	TRANSLATION	protein_coding	start/stop	-	5	266	1	5.33	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001173	Ocrl	ENSMUST00000144664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001173	Ocrl	ENSMUST00000001202	ENSMUSP00000001202	TRANSLATION	protein_coding	-	CCDS40957.1	1	900	7	21.24	5.1	286.8	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000050394	Armcx6	ENSMUST00000150465	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050394	Armcx6	ENSMUST00000126075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000050394	Armcx6	ENSMUST00000052431	ENSMUSP00000057277	TRANSLATION	protein_coding	-	CCDS30399.1	1	301	0	0	1.5	89.3	1	-1,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000050394	Armcx6	ENSMUST00000113194	ENSMUSP00000108819	TRANSLATION	protein_coding	-	CCDS30399.1	2	301	0	0	1.5	89.3	1	-1,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000048007	Timm8a1	ENSMUST00000054213	ENSMUSP00000050156	TRANSLATION	protein_coding	-	CCDS41122.1	1	97	0	1.4	7.6	83.7	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000096194	Btbd35f2	ENSMUST00000179991	ENSMUSP00000136429	TRANSLATION	protein_coding	-	CCDS53038.1	-	498	0	0	0.5	40.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042425	Frmpd3	ENSMUST00000044702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042425	Frmpd3	ENSMUST00000208130	ENSMUSP00000146983	TRANSLATION	protein_coding	-	CCDS85809.1	5	1774	0	5.84	0.5	98	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042425	Frmpd3	ENSMUST00000141660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045179	Sox3	ENSMUST00000135107	ENSMUSP00000115237	TRANSLATION	protein_coding	-	CCDS30161.2	-	450	0	0.4	0.5	199.4	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000083616	H2ab3	ENSMUST00000122050	ENSMUSP00000138211	TRANSLATION	protein_coding	-	CCDS59774.1	-	115	0	0.8	1.5	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000079636	Rhox3c	ENSMUST00000123851	ENSMUSP00000121720	TRANSLATION	protein_coding	start	-	1	187	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079636	Rhox3c	ENSMUST00000115189	ENSMUSP00000110843	TRANSLATION	protein_coding	-	CCDS53054.1	5	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079636	Rhox3c	ENSMUST00000115188	ENSMUSP00000110842	TRANSLATION	protein_coding	-	CCDS53054.1	5	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000079636	Rhox3c	ENSMUST00000151387	ENSMUSP00000133542	TRANSLATION	protein_coding	start	-	1	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031060	Rbm10	ENSMUST00000115374	ENSMUSP00000111032	TRANSLATION	protein_coding	-	CCDS40885.1	1	930	4	9.55	5.3	125.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031060	Rbm10	ENSMUST00000084383	ENSMUSP00000111031	TRANSLATION	protein_coding	-	CCDS53014.1	1	853	4	8.95	5.1	115.6	0	-4,-5	-	-	16.118	MINOR
ENSMUSG00000031060	Rbm10	ENSMUST00000082089	ENSMUSP00000080738	TRANSLATION	protein_coding	-	CCDS53014.1	5	853	4	8.95	5.1	115.6	0	-4,-5	-	-	16.118	MINOR
ENSMUSG00000031060	Rbm10	ENSMUST00000115375	ENSMUSP00000111033	TRANSLATION	protein_coding	-	CCDS53013.1	1	929	4	9.55	5.3	125.4	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000031060	Rbm10	ENSMUST00000064911	ENSMUSP00000068188	TRANSLATION	protein_coding	-	CCDS40885.1	1	930	4	9.55	5.3	125.4	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031060	Rbm10	ENSMUST00000177738	ENSMUSP00000136209	TRANSLATION	protein_coding	-	CCDS53013.1	5	929	4	9.55	5.3	125.4	0	-4,-5	-	-	18	ALTERNATIVE:1
ENSMUSG00000031060	Rbm10	ENSMUST00000141128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056537	Rlim	ENSMUST00000135101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056537	Rlim	ENSMUST00000070705	ENSMUSP00000070662	TRANSLATION	protein_coding	-	CCDS30331.1	1	600	8	0	0.5	49.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056537	Rlim	ENSMUST00000121153	ENSMUSP00000112820	TRANSLATION	protein_coding	-	CCDS30331.1	1	600	8	0	0.5	49.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000002015	Bcap31	ENSMUST00000002091	ENSMUSP00000002091	TRANSLATION	protein_coding	-	CCDS30209.1	1	245	0	2	6.3	258.1	0	-2,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000031157	Pqbp1	ENSMUST00000115654	ENSMUSP00000111318	TRANSLATION	protein_coding	-	CCDS29977.1	1	263	0	1.74	7.5	28.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031157	Pqbp1	ENSMUST00000156741	ENSMUSP00000123657	TRANSLATION	protein_coding	stop	-	5	236	0	0.24	0	28.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031157	Pqbp1	ENSMUST00000154552	ENSMUSP00000114924	TRANSLATION	protein_coding	stop	-	3	100	0	0	0	28.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031157	Pqbp1	ENSMUST00000033497	ENSMUSP00000033497	TRANSLATION	protein_coding	-	CCDS29977.1	1	263	0	1.74	7.5	28.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000031157	Pqbp1	ENSMUST00000115655	ENSMUSP00000111319	TRANSLATION	protein_coding	-	CCDS29977.1	1	263	0	1.74	7.5	28.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000058670	4932411N23Rik	ENSMUST00000081074	ENSMUSP00000079860	TRANSLATION	protein_coding	-	CCDS30382.1	-	470	0	0.2	0.5	91.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096426	Btbd35f24	ENSMUST00000178080	ENSMUSP00000136909	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	40	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031295	Phka2	ENSMUST00000033652	ENSMUSP00000033652	TRANSLATION	protein_coding	-	CCDS30504.1	1	1235	3	0	1.7	655	0	-4,-1	-	-	9	PRINCIPAL:3
ENSMUSG00000031295	Phka2	ENSMUST00000146752	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031295	Phka2	ENSMUST00000139496	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031295	Phka2	ENSMUST00000112380	ENSMUSP00000107999	TRANSLATION	protein_coding	-	CCDS53237.1	1	1191	3	0	0.5	655	0	-4,-1	-	-	9	ALTERNATIVE:2
ENSMUSG00000031295	Phka2	ENSMUST00000131765	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031295	Phka2	ENSMUST00000139587	ENSMUSP00000118575	TRANSLATION	protein_coding	stop	-	3	94	0	0	0	119	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031295	Phka2	ENSMUST00000153907	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031295	Phka2	ENSMUST00000112376	ENSMUSP00000107995	TRANSLATION	protein_coding	-	-	1	537	3	0	0	518.3	0	-4,-1	-	-	3	MINOR
ENSMUSG00000031295	Phka2	ENSMUST00000154142	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031295	Phka2	ENSMUST00000112377	ENSMUSP00000107996	TRANSLATION	protein_coding	-	CCDS30504.1	1	1235	3	0	1.7	655	0	-4,-1	-	-	9	PRINCIPAL:3
ENSMUSG00000080933	Rhox3g	ENSMUST00000119965	ENSMUSP00000138947	TRANSLATION	protein_coding	-	CCDS72366.1	5	160	0	1.1	1.5	43.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000037005	Xpnpep2	ENSMUST00000077775	ENSMUSP00000076951	TRANSLATION	protein_coding	-	CCDS30106.1	1	674	13	14.035	3.9	349.1	1	1,-2	-	-	18.88	PRINCIPAL:1
ENSMUSG00000037005	Xpnpep2	ENSMUST00000129677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037005	Xpnpep2	ENSMUST00000156654	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037005	Xpnpep2	ENSMUST00000114998	ENSMUSP00000110650	TRANSLATION	protein_coding	-	-	1	582	13	12.635	0	281.8	0	1,-2	-	-	11.04	MINOR
ENSMUSG00000037005	Xpnpep2	ENSMUST00000115000	ENSMUSP00000110652	TRANSLATION	protein_coding	-	CCDS81125.1	1	741	13	14.095	0.5	319.8	1	1,-2	-	-	16.242	MINOR
ENSMUSG00000072931	Gm15080	ENSMUST00000112804	ENSMUSP00000108423	TRANSLATION	protein_coding	-	CCDS72445.1	1	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031376	Atp2b3	ENSMUST00000033744	ENSMUSP00000033744	TRANSLATION	protein_coding	-	CCDS85778.1	1	1144	6	8.1	0.5	434	3	-4,-5	-	-	14.562	MINOR
ENSMUSG00000031376	Atp2b3	ENSMUST00000114479	ENSMUSP00000110123	TRANSLATION	protein_coding	-	-	5	1173	6	8.1	8.5	451.9	3	-4,-5	-	-	18.636	MINOR
ENSMUSG00000031376	Atp2b3	ENSMUST00000088429	ENSMUSP00000085775	TRANSLATION	protein_coding	-	CCDS30205.1	1	1220	6	8.1	7.5	491.3	3	-4,-5	-	-	20.601	PRINCIPAL:1
ENSMUSG00000009670	Tex11	ENSMUST00000009814	ENSMUSP00000009814	TRANSLATION	protein_coding	-	CCDS30308.1	1	947	0	0	1.5	199.4	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000009670	Tex11	ENSMUST00000113718	ENSMUSP00000109347	TRANSLATION	protein_coding	-	-	5	947	0	0	1.5	199.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000009670	Tex11	ENSMUST00000113716	ENSMUSP00000109345	TRANSLATION	protein_coding	-	CCDS53150.1	1	707	0	0	0.5	199.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000079509	Zfx	ENSMUST00000135661	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079509	Zfx	ENSMUST00000113925	ENSMUSP00000109558	TRANSLATION	protein_coding	-	-	1	224	0	0	0	177.4	0	-4,-5	-	-	0	MINOR
ENSMUSG00000079509	Zfx	ENSMUST00000130312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079509	Zfx	ENSMUST00000113927	ENSMUSP00000109560	TRANSLATION	protein_coding	-	CCDS30276.1	5	799	52	0.4	7.5	669.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000079509	Zfx	ENSMUST00000113926	ENSMUSP00000109559	TRANSLATION	protein_coding	-	CCDS30276.1	1	799	52	0.4	7.5	669.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000079509	Zfx	ENSMUST00000137853	ENSMUSP00000118903	TRANSLATION	protein_coding	stop	-	1	216	0	0	0	184.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079509	Zfx	ENSMUST00000088102	ENSMUSP00000085423	TRANSLATION	protein_coding	-	CCDS30276.1	1	799	52	0.4	7.5	669.6	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000055746	Magea2	ENSMUST00000069477	ENSMUSP00000069832	TRANSLATION	protein_coding	-	CCDS30491.1	5	320	0	0.8	0.5	25.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055746	Magea2	ENSMUST00000112559	ENSMUSP00000108178	TRANSLATION	protein_coding	-	CCDS30491.1	1	320	0	0.8	0.5	25.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055746	Magea2	ENSMUST00000178950	ENSMUSP00000136214	TRANSLATION	protein_coding	-	CCDS30491.1	5	320	0	0.8	0.5	25.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000108981	Gm15262	ENSMUST00000208920	ENSMUSP00000147161	TRANSLATION	protein_coding	stop	-	5	383	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108981	Gm15262	ENSMUST00000207853	ENSMUSP00000147075	TRANSLATION	protein_coding	stop	-	5	375	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108981	Gm15262	ENSMUST00000208374	-	NO_TRANSLATION	retained_intron
ENSMUSG00000108981	Gm15262	ENSMUST00000207800	ENSMUSP00000147245	TRANSLATION	protein_coding	stop	-	5	529	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108981	Gm15262	ENSMUST00000207320	ENSMUSP00000146912	TRANSLATION	protein_coding	-	-	5	728	0	0	0	58.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000108981	Gm15262	ENSMUST00000207353	ENSMUSP00000147241	TRANSLATION	protein_coding	stop	-	5	394	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000108981	Gm15262	ENSMUST00000141946	ENSMUSP00000147222	TRANSLATION	protein_coding	stop	-	5	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031194	4931400O07Rik	ENSMUST00000033537	ENSMUSP00000033537	TRANSLATION	protein_coding	-	-	1	137	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000129697	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033460	Armcx1	ENSMUST00000035748	ENSMUSP00000043965	TRANSLATION	protein_coding	-	CCDS30398.1	1	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000113198	ENSMUSP00000108823	TRANSLATION	protein_coding	-	CCDS30398.1	2	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000051256	ENSMUSP00000053909	TRANSLATION	protein_coding	-	CCDS30398.1	1	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000138421	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033460	Armcx1	ENSMUST00000113199	ENSMUSP00000108824	TRANSLATION	protein_coding	-	CCDS30398.1	1	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000125684	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033460	Armcx1	ENSMUST00000113201	ENSMUSP00000108826	TRANSLATION	protein_coding	-	CCDS30398.1	2	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000113197	ENSMUSP00000108822	TRANSLATION	protein_coding	-	CCDS30398.1	1	456	0	0	0.5	330.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000033460	Armcx1	ENSMUST00000137173	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040749	Siah1b	ENSMUST00000037928	ENSMUSP00000043215	TRANSLATION	protein_coding	-	CCDS30516.1	1	282	16	1	17	300.6	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040749	Siah1b	ENSMUST00000071667	ENSMUSP00000071592	TRANSLATION	protein_coding	-	CCDS30516.1	1	282	16	1	17	300.6	0	-4,-2	-	-	22	PRINCIPAL:1
ENSMUSG00000040749	Siah1b	ENSMUST00000134272	ENSMUSP00000114867	TRANSLATION	protein_coding	stop	-	3	66	5	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031370	Zrsr2	ENSMUST00000132350	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031370	Zrsr2	ENSMUST00000147928	ENSMUSP00000122747	TRANSLATION	protein_coding	stop	-	5	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031370	Zrsr2	ENSMUST00000090840	ENSMUSP00000088350	TRANSLATION	protein_coding	-	CCDS41205.1	2	144	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031370	Zrsr2	ENSMUST00000127370	ENSMUSP00000120257	TRANSLATION	protein_coding	stop	-	2	71	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031370	Zrsr2	ENSMUST00000139166	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031370	Zrsr2	ENSMUST00000112289	ENSMUSP00000107908	TRANSLATION	protein_coding	-	CCDS41204.1	2	541	4	2.78	0.5	53.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031370	Zrsr2	ENSMUST00000145962	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031370	Zrsr2	ENSMUST00000124719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016327	Atp1b4	ENSMUST00000016471	ENSMUSP00000016471	TRANSLATION	protein_coding	-	CCDS30090.1	1	356	0	4	6.3	302.8	2	-4,-2	-	-	14	PRINCIPAL:3
ENSMUSG00000016327	Atp1b4	ENSMUST00000115134	ENSMUSP00000110787	TRANSLATION	protein_coding	-	CCDS72368.1	1	352	0	4	6.3	291.5	2	-4,-2	-	-	13.322	ALTERNATIVE:1
ENSMUSG00000063728	Magea6	ENSMUST00000112562	ENSMUSP00000108181	TRANSLATION	protein_coding	-	CCDS30488.1	5	325	0	0.8	0.5	25.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063728	Magea6	ENSMUST00000076986	ENSMUSP00000076250	TRANSLATION	protein_coding	-	CCDS30488.1	1	325	0	0.8	0.5	25.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050504	Olfr1323	ENSMUST00000057071	ENSMUSP00000050768	TRANSLATION	protein_coding	-	CCDS30119.1	-	309	0	0.2	1.5	172.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050504	Olfr1323	ENSMUST00000213463	ENSMUSP00000149426	TRANSLATION	protein_coding	-	CCDS30119.1	5	309	0	0.2	1.5	172.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000050504	Olfr1323	ENSMUST00000213556	ENSMUSP00000149286	TRANSLATION	protein_coding	-	CCDS30119.1	5	309	0	0.2	1.5	172.8	6	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000069038	H2al1j	ENSMUST00000091180	ENSMUSP00000088719	TRANSLATION	protein_coding	-	CCDS53011.1	-	109	0	0.8	0.5	37.7	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000040621	Gemin8	ENSMUST00000166440	ENSMUSP00000128502	TRANSLATION	protein_coding	stop	-	3	147	0	0	0	147.8	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040621	Gemin8	ENSMUST00000152248	ENSMUSP00000131284	TRANSLATION	protein_coding	stop	-	2	186	0	0	0	216.6	0	-4,0	-	-	-1	MINOR
ENSMUSG00000040621	Gemin8	ENSMUST00000056410	ENSMUSP00000085137	TRANSLATION	protein_coding	-	CCDS41207.1	1	238	0	0	1.5	334.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000040621	Gemin8	ENSMUST00000096252	ENSMUSP00000093971	TRANSLATION	protein_coding	-	CCDS81195.1	1	207	0	0	0.5	285.7	0	-4,-2	-	-	3.072	MINOR
ENSMUSG00000040621	Gemin8	ENSMUST00000130880	ENSMUSP00000118482	TRANSLATION	protein_coding	-	CCDS41207.1	5	238	0	0	1.5	334.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000040621	Gemin8	ENSMUST00000087169	ENSMUSP00000084414	TRANSLATION	protein_coding	-	CCDS41207.1	1	238	0	0	1.5	334.5	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000057805	1700084M14Rik	ENSMUST00000078832	ENSMUSP00000077877	TRANSLATION	protein_coding	-	-	1	78	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000050435	Ube2dnl1	ENSMUST00000059509	ENSMUSP00000060423	TRANSLATION	protein_coding	-	CCDS72424.1	1	155	0	1	0.5	176.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000015405	Ace2	ENSMUST00000131543	ENSMUSP00000123313	TRANSLATION	protein_coding	stop	-	1	521	7	7.85	0	773.6	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000015405	Ace2	ENSMUST00000073973	ENSMUSP00000073626	TRANSLATION	protein_coding	-	CCDS30518.1	1	805	7	13.35	1.7	1039.4	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000015405	Ace2	ENSMUST00000112271	ENSMUSP00000107890	TRANSLATION	protein_coding	-	CCDS30518.1	1	805	7	13.35	1.7	1039.4	1	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000000134	Tfe3	ENSMUST00000144715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000134	Tfe3	ENSMUST00000115678	ENSMUSP00000111342	TRANSLATION	protein_coding	-	CCDS72333.1	5	432	0	2.49	0.5	295.1	0	-4,0	-	-	11.01	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000115680	ENSMUSP00000111344	TRANSLATION	nonsense_mediated_decay	-	-	5	108	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000133456	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000134	Tfe3	ENSMUST00000126694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000134	Tfe3	ENSMUST00000143680	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000134	Tfe3	ENSMUST00000079542	ENSMUSP00000078498	TRANSLATION	protein_coding	-	CCDS52985.1	1	537	0	2.49	1.5	295.1	0	-4,-5	-	-	11.254	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000144900	ENSMUSP00000120920	TRANSLATION	protein_coding	start/stop	-	2	136	0	0	0	40.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000115677	ENSMUSP00000111341	TRANSLATION	protein_coding	-	CCDS72332.1	1	467	0	2.49	1.5	311.6	0	-4,0	-	-	12.244	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000115679	ENSMUSP00000111343	TRANSLATION	protein_coding	-	CCDS72332.1	1	467	0	2.49	1.5	311.6	0	-4,0	-	-	12.244	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000132209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000134	Tfe3	ENSMUST00000077680	ENSMUSP00000076864	TRANSLATION	protein_coding	-	CCDS52984.1	1	572	0	2.49	5.1	311.6	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000000134	Tfe3	ENSMUST00000137467	ENSMUSP00000134125	TRANSLATION	protein_coding	-	CCDS72332.1	1	467	0	2.49	1.5	311.6	0	-4,0	-	-	12.244	MINOR
ENSMUSG00000000134	Tfe3	ENSMUST00000101695	ENSMUSP00000099219	TRANSLATION	protein_coding	-	CCDS72332.1	5	467	0	2.49	1.5	311.6	0	-4,0	-	-	12.244	MINOR
ENSMUSG00000051323	Pcdh19	ENSMUST00000060309	ENSMUSP00000049889	TRANSLATION	protein_coding	start	-	5	641	15	0.8	0	108.6	1	-4,-5	-	-	-1	MINOR
ENSMUSG00000051323	Pcdh19	ENSMUST00000193376	ENSMUSP00000141338	TRANSLATION	nonsense_mediated_decay	start	-	5	7	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051323	Pcdh19	ENSMUST00000193485	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051323	Pcdh19	ENSMUST00000167944	ENSMUSP00000128313	TRANSLATION	protein_coding	-	CCDS53181.1	5	1097	51	1.8	5.1	331.3	1	3,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000051323	Pcdh19	ENSMUST00000149154	ENSMUSP00000116886	TRANSLATION	protein_coding	-	CCDS41117.1	1	1145	51	1.8	3.9	331.3	1	3,-2	-	-	19.414	PRINCIPAL:3
ENSMUSG00000056854	Pou3f4	ENSMUST00000078229	ENSMUSP00000077354	TRANSLATION	protein_coding	-	CCDS30355.1	-	361	0	0.8	11.7	194.3	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000078206	Fthl17d	ENSMUST00000105004	ENSMUSP00000100621	TRANSLATION	protein_coding	-	CCDS52995.1	-	176	0	1	1.5	92.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071719	Tmem28	ENSMUST00000096363	ENSMUSP00000094090	TRANSLATION	protein_coding	-	CCDS41072.1	5	471	0	0	5.1	0	0	-4,-6	-	-	2	PRINCIPAL:1
ENSMUSG00000023074	Mospd1	ENSMUST00000152743	ENSMUSP00000129567	TRANSLATION	nonsense_mediated_decay	-	-	1	213	0	0	17	64.7	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000023074	Mospd1	ENSMUST00000096447	ENSMUSP00000094182	TRANSLATION	protein_coding	-	CCDS72381.1	1	213	0	0	17	64.7	2	-4,-6	-	-	10	PRINCIPAL:1
ENSMUSG00000023074	Mospd1	ENSMUST00000023836	ENSMUSP00000023836	TRANSLATION	protein_coding	-	CCDS30131.1	1	214	0	0	11.5	64.7	2	-4,-6	-	-	8.624	MINOR
ENSMUSG00000082229	Nap1l2	ENSMUST00000121720	ENSMUSP00000112677	TRANSLATION	protein_coding	-	CCDS53164.1	-	460	0	0.36	1.5	283.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079600	Gm17604	ENSMUST00000114890	ENSMUSP00000110540	TRANSLATION	protein_coding	stop	-	5	25	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000109745	1700018G05Rik	ENSMUST00000211116	ENSMUSP00000147946	TRANSLATION	protein_coding	-	-	1	66	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000118415	Gm2411	ENSMUST00000238410	ENSMUSP00000158706	TRANSLATION	protein_coding	-	-	-	234	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000032750	Gab3	ENSMUST00000114109	ENSMUSP00000109744	TRANSLATION	protein_coding	-	-	2	244	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000032750	Gab3	ENSMUST00000127024	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000032750	Gab3	ENSMUST00000114104	ENSMUSP00000109739	TRANSLATION	protein_coding	-	-	5	556	9	0.87	0	69.3	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000032750	Gab3	ENSMUST00000037374	ENSMUSP00000041951	TRANSLATION	protein_coding	-	CCDS30235.1	1	595	9	0.87	0.5	69.3	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000032750	Gab3	ENSMUST00000129495	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025666	Tmem47	ENSMUST00000171953	ENSMUSP00000129793	TRANSLATION	protein_coding	-	CCDS30254.1	1	181	0	0	19.5	0	3	-3,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000025666	Tmem47	ENSMUST00000026760	ENSMUSP00000026760	TRANSLATION	protein_coding	-	CCDS30254.1	1	181	0	0	19.5	0	3	-3,-6	-	-	4	PRINCIPAL:1
ENSMUSG00000025666	Tmem47	ENSMUST00000150052	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044206	Vsig4	ENSMUST00000146830	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044206	Vsig4	ENSMUST00000050707	ENSMUSP00000051521	TRANSLATION	protein_coding	-	CCDS30288.1	1	280	0	1	0.5	40.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000118483	Gm5945	ENSMUST00000238503	ENSMUSP00000158686	TRANSLATION	protein_coding	-	-	-	234	0	0	0.5	0	0	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000031357	Syap1	ENSMUST00000134629	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031357	Syap1	ENSMUST00000033723	ENSMUSP00000033723	TRANSLATION	protein_coding	-	CCDS30511.1	1	365	0	2.75	0.5	44.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031201	Brcc3	ENSMUST00000118428	ENSMUSP00000114057	TRANSLATION	protein_coding	-	-	5	247	3	5.467	0	151.5	0	-4,-7	-	-	12.9	MINOR
ENSMUSG00000031201	Brcc3	ENSMUST00000124321	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031201	Brcc3	ENSMUST00000033544	ENSMUSP00000033544	TRANSLATION	protein_coding	-	CCDS41031.1	1	291	3	6.467	2.7	151.5	0	-4,-7	-	-	14.898	PRINCIPAL:1
ENSMUSG00000031201	Brcc3	ENSMUST00000151938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031201	Brcc3	ENSMUST00000133781	ENSMUSP00000123031	TRANSLATION	protein_coding	stop	-	5	158	3	4	0	153.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031201	Brcc3	ENSMUST00000152228	ENSMUSP00000127772	TRANSLATION	protein_coding	stop	-	5	50	0	1	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031201	Brcc3	ENSMUST00000114074	ENSMUSP00000109708	TRANSLATION	protein_coding	-	CCDS41031.1	1	291	3	6.467	2.7	151.5	0	-4,-7	-	-	14.898	PRINCIPAL:1
ENSMUSG00000071745	DXBay18	ENSMUST00000080324	ENSMUSP00000079200	TRANSLATION	protein_coding	-	CCDS53094.1	1	695	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000050926	Dcaf12l2	ENSMUST00000115057	ENSMUSP00000110709	TRANSLATION	protein_coding	-	CCDS30100.1	-	469	0	0	1.5	15.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000044149	Nkrf	ENSMUST00000057093	ENSMUSP00000061546	TRANSLATION	protein_coding	-	CCDS30065.1	1	690	0	0.4	2.9	96.8	0	-4,-5	-	-	4.88	MINOR
ENSMUSG00000044149	Nkrf	ENSMUST00000239259	ENSMUSP00000159216	TRANSLATION	protein_coding	-	-	-	784	0	0.88	5.3	175.7	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073016	Uprt	ENSMUST00000087867	ENSMUSP00000085175	TRANSLATION	protein_coding	-	CCDS41093.1	1	310	11	4.2	3.9	183.3	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000031273	Col4a6	ENSMUST00000137051	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031273	Col4a6	ENSMUST00000101205	ENSMUSP00000098765	TRANSLATION	protein_coding	-	CCDS41153.1	1	1691	0	16.355	2.7	771.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031273	Col4a6	ENSMUST00000151459	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031438	Rnf128	ENSMUST00000113026	ENSMUSP00000108649	TRANSLATION	protein_coding	-	CCDS30435.1	1	428	8	3.6	7.5	69.7	1	1,-1	-	-	20.604	PRINCIPAL:1
ENSMUSG00000031438	Rnf128	ENSMUST00000113029	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031438	Rnf128	ENSMUST00000113027	ENSMUSP00000108650	TRANSLATION	protein_coding	-	CCDS57776.1	5	402	8	3.16	5.1	74.6	1	3,-2	-	-	19.011	MINOR
ENSMUSG00000079525	Cldn34d	ENSMUST00000114054	ENSMUSP00000109688	TRANSLATION	protein_coding	-	CCDS53117.1	1	210	0	0.42	1.5	48.1	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031231	Cox7b	ENSMUST00000152398	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031231	Cox7b	ENSMUST00000033582	ENSMUSP00000033582	TRANSLATION	protein_coding	-	CCDS41096.1	1	80	0	2.25	11	141.7	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000031231	Cox7b	ENSMUST00000155377	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031381	Piga	ENSMUST00000112257	ENSMUSP00000137831	TRANSLATION	nonsense_mediated_decay	-	-	1	115	3	0.878	0	56.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031381	Piga	ENSMUST00000133813	ENSMUSP00000122176	TRANSLATION	protein_coding	-	-	5	315	12	1.778	0	58.3	2	-4,-7	-	-	6.072	MINOR
ENSMUSG00000031381	Piga	ENSMUST00000155849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031381	Piga	ENSMUST00000033754	ENSMUSP00000033754	TRANSLATION	protein_coding	-	CCDS30522.1	1	485	18	2.618	2.7	219.8	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031381	Piga	ENSMUST00000151911	ENSMUSP00000138077	TRANSLATION	nonsense_mediated_decay	-	-	5	267	9	1.118	0	146.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031381	Piga	ENSMUST00000208261	ENSMUSP00000146808	TRANSLATION	protein_coding	stop	-	5	245	11	1.698	0	60.5	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000031381	Piga	ENSMUST00000208697	ENSMUSP00000146731	TRANSLATION	protein_coding	-	-	5	250	11	1.5	0	60.5	2	-4,-5	-	-	4.77	MINOR
ENSMUSG00000031381	Piga	ENSMUST00000112255	ENSMUSP00000107874	TRANSLATION	protein_coding	-	CCDS30522.1	1	485	18	2.618	2.7	219.8	2	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000031381	Piga	ENSMUST00000208741	ENSMUSP00000147146	TRANSLATION	protein_coding	stop	-	5	246	11	1.898	0	60.5	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000031232	Magt1	ENSMUST00000033583	ENSMUSP00000033583	TRANSLATION	protein_coding	-	CCDS53168.1	1	368	0	3	0.5	359.1	5	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000031232	Magt1	ENSMUST00000238718	ENSMUSP00000158823	TRANSLATION	protein_coding	-	CCDS53168.1	-	368	0	3	0.5	359.1	5	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000031232	Magt1	ENSMUST00000113566	ENSMUSP00000109196	TRANSLATION	protein_coding	-	-	1	335	0	3	2.2	359.1	5	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031232	Magt1	ENSMUST00000151689	ENSMUSP00000120994	TRANSLATION	protein_coding	-	-	1	335	0	3	2.2	359.1	5	2,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031232	Magt1	ENSMUST00000139421	ENSMUSP00000115579	TRANSLATION	protein_coding	-	-	1	306	0	3	0	315.6	4	2,-2	-	-	9.39	MINOR
ENSMUSG00000050197	Rhox13	ENSMUST00000152730	ENSMUSP00000117271	TRANSLATION	protein_coding	-	CCDS57754.1	1	232	0	1.3	0.5	61.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047686	Rtl3	ENSMUST00000062010	ENSMUSP00000060157	TRANSLATION	protein_coding	-	CCDS30344.1	1	553	4	0	0.5	45.4	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031217	Efnb1	ENSMUST00000151750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031217	Efnb1	ENSMUST00000052839	ENSMUSP00000050716	TRANSLATION	protein_coding	-	CCDS30298.1	1	345	0	2.56	6.3	152.8	0	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000031264	Btk	ENSMUST00000033617	ENSMUSP00000033617	TRANSLATION	protein_coding	-	CCDS30396.1	1	659	35	15.25	8.3	542.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000031264	Btk	ENSMUST00000132664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031264	Btk	ENSMUST00000113213	ENSMUSP00000108839	TRANSLATION	protein_coding	-	-	5	483	22	11.75	1.2	372.1	0	-4,-7	-	-	0.081	MINOR
ENSMUSG00000031264	Btk	ENSMUST00000150245	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031264	Btk	ENSMUST00000128333	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046774	8030474K03Rik	ENSMUST00000151231	ENSMUSP00000133189	TRANSLATION	protein_coding	-	-	5	554	0	0	0	618.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046774	8030474K03Rik	ENSMUST00000149761	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046774	8030474K03Rik	ENSMUST00000163399	ENSMUSP00000130455	TRANSLATION	nonsense_mediated_decay	-	-	1	546	0	0	0.5	613.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001964	Emd	ENSMUST00000119197	ENSMUSP00000112639	TRANSLATION	protein_coding	-	-	3	170	0	1.83	0	58.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000001964	Emd	ENSMUST00000088313	ENSMUSP00000094133	TRANSLATION	protein_coding	-	-	2	158	0	1.83	0.5	58.3	0	-4,-5	-	-	12	MINOR
ENSMUSG00000001964	Emd	ENSMUST00000096424	ENSMUSP00000094158	TRANSLATION	protein_coding	-	-	5	223	0	0.83	0	27.1	1	-4,-5	-	-	5.514	MINOR
ENSMUSG00000001964	Emd	ENSMUST00000129516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001964	Emd	ENSMUST00000152288	ENSMUSP00000115890	TRANSLATION	nonsense_mediated_decay	-	-	5	65	0	0.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000001964	Emd	ENSMUST00000002029	ENSMUSP00000002029	TRANSLATION	protein_coding	-	CCDS30222.1	1	259	0	1.83	7.5	58.3	1	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000039278	Pcsk1n	ENSMUST00000041096	ENSMUSP00000040342	TRANSLATION	protein_coding	-	CCDS29979.1	1	258	0	0	4.1	358.1	0	2,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000067679	Obp1b	ENSMUST00000088198	ENSMUSP00000085528	TRANSLATION	protein_coding	-	CCDS81146.1	1	171	0	3.55	0.5	72.5	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000073290	Gm10490	ENSMUST00000086274	ENSMUSP00000083455	TRANSLATION	protein_coding	start/stop	-	5	120	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000049815	4921511C20Rik	ENSMUST00000051530	ENSMUSP00000059542	TRANSLATION	protein_coding	-	-	-	469	0	0.2	0	100.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047079	Ube2dnl2	ENSMUST00000062695	ENSMUSP00000059077	TRANSLATION	protein_coding	-	CCDS53176.1	1	155	0	1	0.5	174.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000061392	Mageb5	ENSMUST00000082048	ENSMUSP00000080706	TRANSLATION	protein_coding	-	CCDS53133.1	1	366	0	0.6	1.5	25.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031207	Msn	ENSMUST00000117399	ENSMUSP00000113071	TRANSLATION	protein_coding	-	CCDS53139.1	1	577	0	11.5	11.7	474.5	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031207	Msn	ENSMUST00000149985	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031207	Msn	ENSMUST00000135027	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091556	Gm14569	ENSMUST00000140106	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091556	Gm14569	ENSMUST00000169499	ENSMUSP00000126231	TRANSLATION	protein_coding	-	-	5	1637	0	0	0	40.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091556	Gm14569	ENSMUST00000167210	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000091556	Gm14569	ENSMUST00000148691	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008035	Mid1ip1	ENSMUST00000125623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008035	Mid1ip1	ENSMUST00000115524	ENSMUSP00000111186	TRANSLATION	protein_coding	-	CCDS30018.1	1	182	0	0.9	7.5	220.8	0	-4,-5	-	-	14.4	PRINCIPAL:1
ENSMUSG00000008035	Mid1ip1	ENSMUST00000144356	ENSMUSP00000122463	TRANSLATION	protein_coding	stop	-	2	51	0	1	0	89.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008035	Mid1ip1	ENSMUST00000156321	ENSMUSP00000120996	TRANSLATION	protein_coding	stop	-	2	51	0	1	0	89.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000008035	Mid1ip1	ENSMUST00000008179	ENSMUSP00000008179	TRANSLATION	protein_coding	-	CCDS30018.1	1	182	0	0.9	7.5	220.8	0	-4,-5	-	-	14.4	PRINCIPAL:1
ENSMUSG00000031411	Prame	ENSMUST00000033786	ENSMUSP00000033786	TRANSLATION	protein_coding	-	CCDS53190.1	5	464	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000031411	Prame	ENSMUST00000113159	ENSMUSP00000108784	TRANSLATION	protein_coding	-	CCDS53190.1	5	464	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000031112	Stk26	ENSMUST00000136741	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031112	Stk26	ENSMUST00000033444	ENSMUSP00000033444	TRANSLATION	protein_coding	-	CCDS40968.1	1	416	20	9.08	15	239.4	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000031112	Stk26	ENSMUST00000114887	ENSMUSP00000110537	TRANSLATION	protein_coding	-	-	5	392	20	8.33	0	239.4	0	-4,-5	-	-	16.5	MINOR
ENSMUSG00000031112	Stk26	ENSMUST00000146956	-	NO_TRANSLATION	retained_intron
ENSMUSG00000101500	Btbd35f12	ENSMUST00000178827	ENSMUSP00000137368	TRANSLATION	protein_coding	-	CCDS57744.1	-	498	0	0	0.5	36.7	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000071769	Rhox3h	ENSMUST00000096457	ENSMUSP00000094196	TRANSLATION	protein_coding	-	CCDS53060.1	5	215	0	1.6	0.5	42.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000071769	Rhox3h	ENSMUST00000185138	ENSMUSP00000138867	TRANSLATION	protein_coding	start	-	1	178	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071769	Rhox3h	ENSMUST00000184824	ENSMUSP00000139320	TRANSLATION	protein_coding	start	-	1	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000002012	Pnck	ENSMUST00000114472	ENSMUSP00000110116	TRANSLATION	protein_coding	-	CCDS30207.1	1	343	18	8.6	6.3	254.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002012	Pnck	ENSMUST00000129106	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002012	Pnck	ENSMUST00000002087	ENSMUSP00000002087	TRANSLATION	protein_coding	-	CCDS30207.1	1	343	18	8.6	6.3	254.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002012	Pnck	ENSMUST00000114473	ENSMUSP00000110117	TRANSLATION	protein_coding	-	CCDS30207.1	1	343	18	8.6	6.3	254.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000002012	Pnck	ENSMUST00000144187	ENSMUSP00000120453	TRANSLATION	protein_coding	stop	-	2	227	18	6	0	212.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019088	Dnase1l1	ENSMUST00000019232	ENSMUSP00000019232	TRANSLATION	protein_coding	-	CCDS30223.1	1	314	12	5.85	0.5	55.6	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000019088	Dnase1l1	ENSMUST00000128763	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019088	Dnase1l1	ENSMUST00000119361	ENSMUSP00000113515	TRANSLATION	protein_coding	stop	-	3	64	3	0.9	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000019088	Dnase1l1	ENSMUST00000148882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019088	Dnase1l1	ENSMUST00000114189	ENSMUSP00000109827	TRANSLATION	protein_coding	-	-	3	86	2	1.2	0	0	0	4,-1	-	-	0	MINOR
ENSMUSG00000019088	Dnase1l1	ENSMUST00000075821	ENSMUSP00000075218	TRANSLATION	protein_coding	-	-	1	296	12	5.85	0	55.6	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000019088	Dnase1l1	ENSMUST00000239445	ENSMUSP00000159293	TRANSLATION	protein_coding	-	CCDS30223.1	-	314	12	5.85	0.5	55.6	0	2,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000019088	Dnase1l1	ENSMUST00000239458	ENSMUSP00000159292	TRANSLATION	protein_coding	-	-	-	296	12	5.85	0	55.6	0	4,-1	-	-	18	ALTERNATIVE:2
ENSMUSG00000096834	Gm15127	ENSMUST00000101186	ENSMUSP00000098746	TRANSLATION	protein_coding	-	CCDS59777.1	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000096834	Gm15127	ENSMUST00000112753	ENSMUSP00000108373	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000096834	Gm15127	ENSMUST00000101190	ENSMUSP00000098751	TRANSLATION	protein_coding	-	-	5	433	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000045180	Shroom2	ENSMUST00000137217	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045180	Shroom2	ENSMUST00000101141	ENSMUSP00000098701	TRANSLATION	protein_coding	-	CCDS41179.1	1	1487	0	4.4	0.5	613.7	0	-4,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000045180	Shroom2	ENSMUST00000141677	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045180	Shroom2	ENSMUST00000124141	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045180	Shroom2	ENSMUST00000152746	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045180	Shroom2	ENSMUST00000062317	ENSMUSP00000057500	TRANSLATION	protein_coding	-	CCDS72455.1	1	1481	0	4.4	0.5	613.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000048621	Gm6377	ENSMUST00000060013	ENSMUSP00000049931	TRANSLATION	protein_coding	-	CCDS30354.1	1	303	0	0	1.5	365.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000048621	Gm6377	ENSMUST00000139259	ENSMUSP00000118524	TRANSLATION	protein_coding	stop	-	3	83	0	0	0	127.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068219	Ssxb10	ENSMUST00000103003	ENSMUSP00000100068	TRANSLATION	protein_coding	-	CCDS29995.1	1	170	0	0	0.5	81.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000091736	Yy2	ENSMUST00000065806	ENSMUSP00000070112	TRANSLATION	protein_coding	-	CCDS53233.1	-	378	16	0.6	0.5	58.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031168	Ebp	ENSMUST00000149495	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031168	Ebp	ENSMUST00000033509	ENSMUSP00000033509	TRANSLATION	protein_coding	-	CCDS29989.1	1	230	0	0	5.1	187.1	5	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000031168	Ebp	ENSMUST00000143223	ENSMUSP00000116845	TRANSLATION	protein_coding	stop	-	2	121	0	0	0	72.3	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000031168	Ebp	ENSMUST00000140011	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041633	Kctd12b	ENSMUST00000039424	ENSMUSP00000037539	TRANSLATION	protein_coding	-	CCDS30484.1	1	292	0	0.6	1.5	58.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041633	Kctd12b	ENSMUST00000112572	ENSMUSP00000108191	TRANSLATION	protein_coding	-	CCDS30484.1	1	292	0	0.6	1.5	58.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031204	Asb12	ENSMUST00000134899	ENSMUSP00000148104	TRANSLATION	protein_coding	stop	-	3	70	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031204	Asb12	ENSMUST00000033549	ENSMUSP00000033549	TRANSLATION	protein_coding	-	CCDS30283.1	1	308	0	1.8	3.9	92.2	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000046032	Snx12	ENSMUST00000130826	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046032	Snx12	ENSMUST00000156473	ENSMUSP00000119102	TRANSLATION	protein_coding	-	CCDS53152.1	1	170	0	4	1.5	94.2	0	-4,-5	-	-	11.448	MINOR
ENSMUSG00000046032	Snx12	ENSMUST00000120389	ENSMUSP00000113117	TRANSLATION	protein_coding	-	CCDS53151.1	1	162	0	4	19.5	94.2	0	-4,-5	-	-	15.34	PRINCIPAL:1
ENSMUSG00000046032	Snx12	ENSMUST00000077876	ENSMUSP00000077038	TRANSLATION	protein_coding	-	CCDS41076.1	1	166	0	4.33	1.5	94.2	0	-4,-5	-	-	12.108	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000145767	ENSMUSP00000119897	TRANSLATION	protein_coding	stop	-	2	43	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000119833	ENSMUSP00000113639	TRANSLATION	protein_coding	-	-	5	187	7	4.25	0	147.7	0	-4,-6	-	-	16.398	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000119306	ENSMUSP00000113206	TRANSLATION	protein_coding	-	CCDS72383.1	1	192	7	4.58	9.4	147.7	0	-4,-7	-	-	19.27	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000131319	ENSMUSP00000115765	TRANSLATION	protein_coding	stop	-	3	69	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000150413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031137	Fgf13	ENSMUST00000123660	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031137	Fgf13	ENSMUST00000124402	ENSMUSP00000114905	TRANSLATION	protein_coding	stop	-	2	97	1	0.75	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031137	Fgf13	ENSMUST00000138503	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031137	Fgf13	ENSMUST00000033473	ENSMUSP00000033473	TRANSLATION	protein_coding	-	CCDS30157.1	1	245	7	5.05	16.2	147.7	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000031377	Bmx	ENSMUST00000112265	ENSMUSP00000107884	TRANSLATION	protein_coding	-	CCDS30519.2	1	655	16	9.06	2.7	500.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000031377	Bmx	ENSMUST00000112263	ENSMUSP00000107882	TRANSLATION	protein_coding	-	-	5	651	16	9.06	1.2	500.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000060681	Slc9a6	ENSMUST00000077741	ENSMUSP00000076922	TRANSLATION	protein_coding	-	CCDS40979.1	1	702	0	4.11	6.3	311.3	9	-2,2	-	-	13.598	PRINCIPAL:1
ENSMUSG00000060681	Slc9a6	ENSMUST00000202670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060681	Slc9a6	ENSMUST00000114784	ENSMUSP00000110432	TRANSLATION	protein_coding	-	-	5	670	0	4.11	1.2	318	9	-2,2	-	-	12.076	MINOR
ENSMUSG00000060681	Slc9a6	ENSMUST00000207892	ENSMUSP00000147081	TRANSLATION	protein_coding	start/stop	-	5	206	0	0	0	0	2	1,-3	-	-	-1	MINOR
ENSMUSG00000060681	Slc9a6	ENSMUST00000144068	ENSMUSP00000115364	TRANSLATION	protein_coding	stop	-	5	313	0	2.5	0	173.9	5	-4,-7	-	-	-1	MINOR
ENSMUSG00000061065	H2al1o	ENSMUST00000079952	ENSMUSP00000078870	TRANSLATION	protein_coding	-	CCDS52998.1	-	110	0	0.8	0.5	33.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062949	Atp11c	ENSMUST00000101527	ENSMUSP00000099066	TRANSLATION	protein_coding	-	CCDS40988.1	1	1129	6	5.585	4.1	404.8	11	-4,-2	-	-	19	PRINCIPAL:3
ENSMUSG00000062949	Atp11c	ENSMUST00000138569	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062949	Atp11c	ENSMUST00000154051	ENSMUSP00000119320	TRANSLATION	protein_coding	start	-	5	1129	6	5.585	0	404.8	11	-4,-7	-	-	-1	MINOR
ENSMUSG00000062949	Atp11c	ENSMUST00000033480	ENSMUSP00000033480	TRANSLATION	protein_coding	-	CCDS40987.1	5	1116	6	5.585	4.1	404.8	11	-4,-2	-	-	19	ALTERNATIVE:2
ENSMUSG00000062949	Atp11c	ENSMUST00000133295	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031365	Zfp275	ENSMUST00000114499	ENSMUSP00000110143	TRANSLATION	protein_coding	-	CCDS53097.1	1	377	44	0.6	5.3	188.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031365	Zfp275	ENSMUST00000139996	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031365	Zfp275	ENSMUST00000033731	ENSMUSP00000033731	TRANSLATION	protein_coding	-	CCDS30199.2	1	499	44	0.6	1.5	188.1	0	-3,-6	-	-	18.232	MINOR
ENSMUSG00000091497	Gm44	ENSMUST00000172155	ENSMUSP00000129722	TRANSLATION	protein_coding	-	CCDS53130.1	-	330	0	0.6	0.5	29.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000046699	Slitrk4	ENSMUST00000156121	ENSMUSP00000122648	TRANSLATION	protein_coding	stop	-	2	110	0	1	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000046699	Slitrk4	ENSMUST00000114679	ENSMUSP00000110327	TRANSLATION	protein_coding	-	CCDS30167.1	1	837	0	1.4	10.8	101.4	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000046699	Slitrk4	ENSMUST00000069926	ENSMUSP00000064443	TRANSLATION	protein_coding	-	CCDS30167.1	1	837	0	1.4	10.8	101.4	1	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000058328	Xlr5a	ENSMUST00000114520	ENSMUSP00000110166	TRANSLATION	protein_coding	-	CCDS30194.1	3	236	0	3.1	1.5	125	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058328	Xlr5a	ENSMUST00000114521	ENSMUSP00000110167	TRANSLATION	protein_coding	-	-	5	203	0	2.3	0.5	61.8	0	-4,-5	-	-	6.606	MINOR
ENSMUSG00000058328	Xlr5a	ENSMUST00000078574	ENSMUSP00000077650	TRANSLATION	protein_coding	-	CCDS30194.1	1	236	0	3.1	1.5	125	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000058328	Xlr5a	ENSMUST00000179600	ENSMUSP00000137006	TRANSLATION	protein_coding	-	CCDS30194.1	5	236	0	3.1	1.5	125	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031239	Itm2a	ENSMUST00000033591	ENSMUSP00000033591	TRANSLATION	protein_coding	-	CCDS30349.1	1	263	0	0	5.1	64.6	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000025272	Tro	ENSMUST00000163969	ENSMUSP00000126054	TRANSLATION	protein_coding	-	CCDS81183.1	1	802	0	4.89	0.5	0	0	-4,-7	-	-	4.398	MINOR
ENSMUSG00000025272	Tro	ENSMUST00000148604	ENSMUSP00000116905	TRANSLATION	protein_coding	stop	-	1	560	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025272	Tro	ENSMUST00000163450	ENSMUSP00000127689	TRANSLATION	nonsense_mediated_decay	-	-	5	35	4	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025272	Tro	ENSMUST00000165192	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025272	Tro	ENSMUST00000151403	ENSMUSP00000120457	TRANSLATION	protein_coding	-	CCDS72448.1	1	838	0	5.69	0.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000025272	Tro	ENSMUST00000171775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025272	Tro	ENSMUST00000164071	ENSMUSP00000126042	TRANSLATION	protein_coding	-	-	5	296	0	5.69	0	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000025272	Tro	ENSMUST00000087253	ENSMUSP00000084508	TRANSLATION	protein_coding	-	CCDS53221.1	1	972	0	5.69	0.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000025272	Tro	ENSMUST00000112709	ENSMUSP00000108329	TRANSLATION	protein_coding	-	CCDS30465.1	5	2087	0	5.69	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000025272	Tro	ENSMUST00000087258	ENSMUSP00000084513	TRANSLATION	protein_coding	-	CCDS30465.1	1	2087	0	5.69	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000025272	Tro	ENSMUST00000169450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071708	Sms	ENSMUST00000127089	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071708	Sms	ENSMUST00000145477	ENSMUSP00000131254	TRANSLATION	nonsense_mediated_decay	-	-	5	258	16	6.58	0	77.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071708	Sms	ENSMUST00000146026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071708	Sms	ENSMUST00000112529	ENSMUSP00000108148	TRANSLATION	protein_coding	-	CCDS41189.1	1	366	20	9.91	8.8	177.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000071708	Sms	ENSMUST00000123770	ENSMUSP00000115810	TRANSLATION	protein_coding	stop	-	5	62	0	2.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000094592	Samt1d	ENSMUST00000112565	ENSMUSP00000108184	TRANSLATION	protein_coding	-	CCDS57782.1	2	237	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000045330	4933402E13Rik	ENSMUST00000051414	ENSMUSP00000056260	TRANSLATION	protein_coding	-	CCDS53078.1	1	429	0	0.6	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045330	4933402E13Rik	ENSMUST00000178085	ENSMUSP00000136235	TRANSLATION	protein_coding	-	CCDS53078.1	2	429	0	0.6	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000037167	Spaca5	ENSMUST00000040437	ENSMUSP00000048721	TRANSLATION	protein_coding	-	CCDS40888.1	5	160	6	3.35	1.5	140	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000072934	Trpc5os	ENSMUST00000178233	ENSMUSP00000147698	TRANSLATION	protein_coding	-	CCDS85811.1	5	110	0	0	5.1	0	0	-3,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000072934	Trpc5os	ENSMUST00000155206	ENSMUSP00000148184	TRANSLATION	protein_coding	-	CCDS85811.1	1	110	0	0	5.1	0	0	-3,-4	-	-	2	PRINCIPAL:1
ENSMUSG00000031221	Igbp1	ENSMUST00000144881	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031221	Igbp1	ENSMUST00000033570	ENSMUSP00000033570	TRANSLATION	protein_coding	-	CCDS30302.1	1	340	0	3	1.5	292	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000063663	Brwd3	ENSMUST00000101283	ENSMUSP00000098841	TRANSLATION	protein_coding	-	-	1	181	0	0.246	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000063663	Brwd3	ENSMUST00000041866	ENSMUSP00000134621	TRANSLATION	nonsense_mediated_decay	-	-	5	84	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063663	Brwd3	ENSMUST00000144521	ENSMUSP00000133674	TRANSLATION	nonsense_mediated_decay	-	-	5	60	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000063663	Brwd3	ENSMUST00000150434	ENSMUSP00000123588	TRANSLATION	protein_coding	-	CCDS41100.1	5	1799	0	8.571	7.5	215.4	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000063663	Brwd3	ENSMUST00000134434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073010	Gm5127	ENSMUST00000101297	ENSMUSP00000098855	TRANSLATION	protein_coding	-	CCDS30343.1	1	212	0	0	1.5	0	3	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073010	Gm5127	ENSMUST00000101296	ENSMUSP00000098854	TRANSLATION	protein_coding	-	CCDS30343.1	1	212	0	0	1.5	0	3	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000034480	Diaph2	ENSMUST00000155333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034480	Diaph2	ENSMUST00000133457	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034480	Diaph2	ENSMUST00000127577	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034480	Diaph2	ENSMUST00000037854	ENSMUSP00000039334	TRANSLATION	protein_coding	-	CCDS53180.1	1	1102	0	20.385	0.5	799.1	0	-4,-5	-	-	11.958	PRINCIPAL:2
ENSMUSG00000034480	Diaph2	ENSMUST00000167619	ENSMUSP00000131879	TRANSLATION	protein_coding	-	-	5	1102	0	20.385	0.5	796.5	0	-4,-5	-	-	11.802	ALTERNATIVE:2
ENSMUSG00000034480	Diaph2	ENSMUST00000143668	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034480	Diaph2	ENSMUST00000113320	ENSMUSP00000108946	TRANSLATION	protein_coding	-	-	5	1098	0	20.4048	0.5	797.4	0	-4,-5	-	-	11.898	ALTERNATIVE:2
ENSMUSG00000031119	Gpc4	ENSMUST00000033450	ENSMUSP00000033450	TRANSLATION	protein_coding	-	CCDS30124.1	1	557	0	7	7.5	782.8	0	3,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000041552	Ptchd1	ENSMUST00000170236	ENSMUSP00000132293	TRANSLATION	protein_coding	start	-	5	146	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041552	Ptchd1	ENSMUST00000141356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041552	Ptchd1	ENSMUST00000038665	ENSMUSP00000039443	TRANSLATION	protein_coding	-	CCDS41188.1	1	888	0	0.88	10.8	333.8	0	-4,0	-	-	15	PRINCIPAL:1
ENSMUSG00000041649	Klf8	ENSMUST00000112574	ENSMUSP00000108193	TRANSLATION	protein_coding	-	CCDS30481.1	1	355	12	2	1.5	64.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000041649	Klf8	ENSMUST00000143880	ENSMUSP00000117653	TRANSLATION	protein_coding	stop	-	5	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041649	Klf8	ENSMUST00000039545	ENSMUSP00000044317	TRANSLATION	protein_coding	-	CCDS30481.1	1	355	12	2	1.5	64.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000094596	Btbd35f20	ENSMUST00000179325	ENSMUSP00000137373	TRANSLATION	protein_coding	-	CCDS57724.1	-	498	0	0	0.5	41.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000100200	H2al1m	ENSMUST00000073949	ENSMUSP00000073605	TRANSLATION	protein_coding	-	CCDS40856.1	-	105	0	0.8	0.5	41.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000078213	Btbd35f4	ENSMUST00000105011	ENSMUSP00000100628	TRANSLATION	protein_coding	-	CCDS52979.1	-	496	0	0	0.5	45.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000101381	Btbd35f16	ENSMUST00000185755	ENSMUSP00000141118	TRANSLATION	protein_coding	-	CCDS72326.1	-	498	0	0	0.5	39.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000037475	Thoc2	ENSMUST00000151454	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037475	Thoc2	ENSMUST00000129915	ENSMUSP00000121941	TRANSLATION	nonsense_mediated_decay	start	-	5	125	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000131259	ENSMUSP00000119823	TRANSLATION	nonsense_mediated_decay	start	-	5	53	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000124458	ENSMUSP00000119460	TRANSLATION	protein_coding	start	-	1	232	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000151430	ENSMUSP00000115815	TRANSLATION	nonsense_mediated_decay	start	-	5	165	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000127338	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037475	Thoc2	ENSMUST00000130993	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037475	Thoc2	ENSMUST00000155369	ENSMUSP00000120342	TRANSLATION	protein_coding	start	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000145586	ENSMUSP00000118960	TRANSLATION	protein_coding	start	-	5	86	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000151802	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037475	Thoc2	ENSMUST00000143557	ENSMUSP00000118106	TRANSLATION	protein_coding	start	-	5	117	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000152921	ENSMUSP00000114148	TRANSLATION	protein_coding	stop	-	2	87	0	0	0	0	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000037475	Thoc2	ENSMUST00000150443	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037475	Thoc2	ENSMUST00000047037	ENSMUSP00000044677	TRANSLATION	protein_coding	-	CCDS40951.1	5	1594	0	0	5.1	474.3	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000037475	Thoc2	ENSMUST00000123512	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037475	Thoc2	ENSMUST00000134084	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000048970	C1galt1c1	ENSMUST00000058265	ENSMUSP00000059224	TRANSLATION	protein_coding	-	CCDS30095.1	1	316	0	0	7.5	0	0	-4,-7	-	-	3	PRINCIPAL:1
ENSMUSG00000044583	Tlr7	ENSMUST00000137492	ENSMUSP00000120922	TRANSLATION	protein_coding	stop	-	3	47	0	0	0	0	0	3,-3	-	-	-1	MINOR
ENSMUSG00000044583	Tlr7	ENSMUST00000112161	ENSMUSP00000107787	TRANSLATION	protein_coding	-	CCDS72469.1	1	1050	0	1.6	4.1	209.1	1	4,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000044583	Tlr7	ENSMUST00000149507	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044583	Tlr7	ENSMUST00000112164	ENSMUSP00000107789	TRANSLATION	protein_coding	-	CCDS30531.1	1	1050	0	1.6	4.1	209.1	1	4,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000044583	Tlr7	ENSMUST00000145284	ENSMUSP00000114305	TRANSLATION	protein_coding	stop	-	2	49	0	0.6	0	0	0	4,-3	-	-	-1	MINOR
ENSMUSG00000044583	Tlr7	ENSMUST00000060719	ENSMUSP00000061853	TRANSLATION	protein_coding	-	CCDS30531.1	1	1050	0	1.6	4.1	209.1	1	4,-3	-	-	13	PRINCIPAL:1
ENSMUSG00000059493	Nhs	ENSMUST00000081569	ENSMUSP00000080280	TRANSLATION	protein_coding	-	CCDS41201.1	1	1626	0	0.34	0.5	713.7	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000059493	Nhs	ENSMUST00000087085	ENSMUSP00000084319	TRANSLATION	protein_coding	-	CCDS72461.1	1	1647	0	0.34	0.5	713.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000118459	Btbd35f1	ENSMUST00000238237	ENSMUSP00000158585	TRANSLATION	protein_coding	-	CCDS40910.1	-	498	0	0	0.5	40.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000081218	Gm4297	ENSMUST00000119285	ENSMUSP00000112514	TRANSLATION	protein_coding	-	CCDS53021.1	5	211	0	1.55	0.5	37.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067215	Usp51	ENSMUST00000095755	ENSMUSP00000093427	TRANSLATION	protein_coding	-	CCDS53226.1	1	661	27	0.36	0.5	236.8	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031320	Rps4x	ENSMUST00000033683	ENSMUSP00000033683	TRANSLATION	protein_coding	-	CCDS41083.1	1	263	0	5.75	19.5	365.6	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031320	Rps4x	ENSMUST00000155028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031320	Rps4x	ENSMUST00000152739	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025266	Gnl3l	ENSMUST00000156233	ENSMUSP00000117281	TRANSLATION	protein_coding	stop	-	2	68	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025266	Gnl3l	ENSMUST00000124022	ENSMUSP00000138542	TRANSLATION	nonsense_mediated_decay	-	-	2	35	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025266	Gnl3l	ENSMUST00000112691	ENSMUSP00000108311	TRANSLATION	protein_coding	-	CCDS41174.1	1	577	16	3.01	3.9	51.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000025266	Gnl3l	ENSMUST00000026297	ENSMUSP00000026297	TRANSLATION	protein_coding	-	CCDS41174.1	1	577	16	3.01	3.9	51.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000025266	Gnl3l	ENSMUST00000146742	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025266	Gnl3l	ENSMUST00000154393	ENSMUSP00000138737	TRANSLATION	protein_coding	stop	-	3	164	9	0.98	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025266	Gnl3l	ENSMUST00000138026	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031149	Praf2	ENSMUST00000033489	ENSMUSP00000033489	TRANSLATION	protein_coding	-	CCDS29971.1	1	178	0	0	6.3	108.2	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000068270	Shroom4	ENSMUST00000103005	ENSMUSP00000100070	TRANSLATION	protein_coding	-	CCDS29959.1	1	1475	0	4.5	0.5	322.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068270	Shroom4	ENSMUST00000089520	ENSMUSP00000086949	TRANSLATION	protein_coding	-	CCDS85744.1	1	1359	0	2	0.5	322.7	0	-4,-5	-	-	7.002	MINOR
ENSMUSG00000068270	Shroom4	ENSMUST00000143641	ENSMUSP00000131806	TRANSLATION	protein_coding	stop	-	3	200	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000064129	Gm14781	ENSMUST00000078469	ENSMUSP00000077562	TRANSLATION	protein_coding	-	CCDS57768.1	1	366	0	0.6	1.5	25.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041133	Smc1a	ENSMUST00000045312	ENSMUSP00000044645	TRANSLATION	protein_coding	-	CCDS30473.1	1	1233	7	11.53	13	256.8	0	-4,-5	-	-	21.25	PRINCIPAL:1
ENSMUSG00000041133	Smc1a	ENSMUST00000131395	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041133	Smc1a	ENSMUST00000145518	ENSMUSP00000138113	TRANSLATION	nonsense_mediated_decay	-	-	1	54	8	1	0	44.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041133	Smc1a	ENSMUST00000141457	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041133	Smc1a	ENSMUST00000135172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041133	Smc1a	ENSMUST00000124681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067860	Zic3	ENSMUST00000088629	ENSMUSP00000086001	TRANSLATION	protein_coding	-	-	1	456	20	2	6	84.4	0	-4,-5	-	-	19.365	MINOR
ENSMUSG00000067860	Zic3	ENSMUST00000088627	ENSMUSP00000085999	TRANSLATION	protein_coding	-	CCDS30155.1	1	466	21	2	7.5	88.5	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000067860	Zic3	ENSMUST00000137687	ENSMUSP00000116383	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067860	Zic3	ENSMUST00000088631	ENSMUSP00000086003	TRANSLATION	protein_coding	-	-	5	246	21	2	0	88.5	0	-4,-2	-	-	18	MINOR
ENSMUSG00000079395	Gm15114	ENSMUST00000112788	ENSMUSP00000108408	TRANSLATION	protein_coding	-	CCDS53212.1	5	433	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000071772	Rhox3a	ENSMUST00000185050	ENSMUSP00000139048	TRANSLATION	protein_coding	start	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071772	Rhox3a	ENSMUST00000185028	ENSMUSP00000139384	TRANSLATION	protein_coding	start	-	5	187	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071772	Rhox3a	ENSMUST00000115203	ENSMUSP00000110857	TRANSLATION	protein_coding	-	CCDS30076.1	1	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031367	Ap1s2	ENSMUST00000033734	ENSMUSP00000033734	TRANSLATION	protein_coding	-	CCDS72466.1	1	157	0	4.25	20.3	202.5	0	-4,-1	-	-	16	ALTERNATIVE:1
ENSMUSG00000031367	Ap1s2	ENSMUST00000112294	ENSMUSP00000107913	TRANSLATION	protein_coding	-	CCDS30514.1	1	160	0	3.75	3.9	202.5	0	-4,-1	-	-	11.598	MINOR
ENSMUSG00000031367	Ap1s2	ENSMUST00000140845	ENSMUSP00000114902	TRANSLATION	protein_coding	start	-	5	132	0	3.1	0	164	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031367	Ap1s2	ENSMUST00000069041	ENSMUSP00000066185	TRANSLATION	protein_coding	-	CCDS72465.1	1	160	0	4.25	20.3	202.5	0	-4,-1	-	-	16	PRINCIPAL:4
ENSMUSG00000031150	Ccdc120	ENSMUST00000154977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031150	Ccdc120	ENSMUST00000153925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031150	Ccdc120	ENSMUST00000139499	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031150	Ccdc120	ENSMUST00000128289	ENSMUSP00000119351	TRANSLATION	protein_coding	stop	-	3	38	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031150	Ccdc120	ENSMUST00000128852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031150	Ccdc120	ENSMUST00000128011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031150	Ccdc120	ENSMUST00000224502	ENSMUSP00000153379	TRANSLATION	protein_coding	start	-	-	278	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031150	Ccdc120	ENSMUST00000033490	ENSMUSP00000033490	TRANSLATION	protein_coding	-	CCDS29972.1	1	629	0	0	1.7	142.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031150	Ccdc120	ENSMUST00000156787	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036502	Tmem255a	ENSMUST00000066498	ENSMUSP00000064511	TRANSLATION	protein_coding	-	CCDS30089.1	1	351	0	0	7.5	526.9	4	-4,-2	-	-	9	PRINCIPAL:1
ENSMUSG00000036502	Tmem255a	ENSMUST00000155848	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036502	Tmem255a	ENSMUST00000089056	ENSMUSP00000086457	TRANSLATION	protein_coding	-	CCDS81122.1	1	331	0	0	0.5	460.9	4	-4,-2	-	-	2.04	MINOR
ENSMUSG00000036502	Tmem255a	ENSMUST00000089054	ENSMUSP00000086455	TRANSLATION	protein_coding	-	CCDS72367.1	1	328	0	0	1.5	495.1	4	-4,-2	-	-	4.323	MINOR
ENSMUSG00000036502	Tmem255a	ENSMUST00000139358	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073125	Xlr3b	ENSMUST00000137641	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073125	Xlr3b	ENSMUST00000138149	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073125	Xlr3b	ENSMUST00000101486	ENSMUSP00000099026	TRANSLATION	protein_coding	-	CCDS41009.1	1	226	0	3.32	1.5	110.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031343	Gabra3	ENSMUST00000137517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031343	Gabra3	ENSMUST00000055966	ENSMUSP00000062638	TRANSLATION	protein_coding	-	CCDS30187.1	1	492	5	5.83	3.9	273	0	3,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000031343	Gabra3	ENSMUST00000114554	ENSMUSP00000110201	TRANSLATION	protein_coding	-	-	5	533	5	5.83	0	272.7	0	-4,-6	-	-	16.982	ALTERNATIVE:2
ENSMUSG00000048155	H2bfm	ENSMUST00000059808	ENSMUSP00000055261	TRANSLATION	protein_coding	-	CCDS53196.1	-	224	0	0.6	0.5	91.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000120971	ENSMUSP00000112974	TRANSLATION	protein_coding	-	CCDS30348.1	1	335	0	0.6	5.1	133.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000117310	ENSMUSP00000112808	TRANSLATION	protein_coding	-	CCDS30348.1	1	335	0	0.6	5.1	133.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000118820	ENSMUSP00000113032	TRANSLATION	protein_coding	-	CCDS30348.1	1	335	0	0.6	5.1	133.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000101294	ENSMUSP00000098852	TRANSLATION	protein_coding	-	CCDS30348.1	1	335	0	0.6	5.1	133.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000178838	ENSMUSP00000137372	TRANSLATION	protein_coding	-	CCDS30348.1	2	335	0	0.6	5.1	133.9	6	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000073008	Gpr174	ENSMUST00000156709	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073008	Gpr174	ENSMUST00000138031	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031290	Lrch2	ENSMUST00000151730	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031290	Lrch2	ENSMUST00000136789	ENSMUSP00000123633	TRANSLATION	protein_coding	start	-	5	784	0	6.782	0	110.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031290	Lrch2	ENSMUST00000152838	ENSMUSP00000121128	TRANSLATION	protein_coding	start	-	5	452	0	2.32	0	37.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031290	Lrch2	ENSMUST00000137665	ENSMUSP00000117458	TRANSLATION	protein_coding	start	-	5	464	0	2.782	0	37.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031290	Lrch2	ENSMUST00000112819	ENSMUSP00000108438	TRANSLATION	protein_coding	-	CCDS41160.1	5	773	0	6.782	0.5	110.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031290	Lrch2	ENSMUST00000134265	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052676	Zmat1	ENSMUST00000064659	ENSMUSP00000066815	TRANSLATION	protein_coding	-	CCDS41126.1	1	647	7	1.84	1.5	16.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000052676	Zmat1	ENSMUST00000113185	ENSMUSP00000108810	TRANSLATION	protein_coding	-	-	5	613	6	1.36	0	16.1	0	-4,-5	-	-	15.576	MINOR
ENSMUSG00000052676	Zmat1	ENSMUST00000151252	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052676	Zmat1	ENSMUST00000141849	-	NO_TRANSLATION	retained_intron
ENSMUSG00000090110	Cmc4	ENSMUST00000120286	ENSMUSP00000112753	TRANSLATION	protein_coding	-	CCDS41030.1	2	68	0	1.75	7.6	67.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000090110	Cmc4	ENSMUST00000033543	ENSMUSP00000033543	TRANSLATION	protein_coding	-	CCDS41030.1	1	68	0	1.75	7.6	67.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000090110	Cmc4	ENSMUST00000149863	ENSMUSP00000117381	TRANSLATION	protein_coding	-	CCDS41030.1	3	68	0	1.75	7.6	67.8	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000118438	Btbd35f8	ENSMUST00000238270	ENSMUSP00000158734	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	38.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000034732	Pabpc5	ENSMUST00000113366	ENSMUSP00000108993	TRANSLATION	protein_coding	-	CCDS30369.1	5	381	0	0.8	7.5	253.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000034732	Pabpc5	ENSMUST00000040961	ENSMUSP00000047756	TRANSLATION	protein_coding	-	CCDS30369.1	1	381	0	0.8	7.5	253.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000064137	Rhox8	ENSMUST00000071885	ENSMUSP00000071782	TRANSLATION	protein_coding	-	CCDS30082.1	1	320	0	1	0.5	65.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000054737	Zfp182	ENSMUST00000115334	ENSMUSP00000110990	TRANSLATION	protein_coding	-	-	5	663	56	1.6	0	426.1	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000054737	Zfp182	ENSMUST00000040628	ENSMUSP00000045005	TRANSLATION	protein_coding	-	CCDS40887.1	1	627	56	1.6	0.5	426.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054737	Zfp182	ENSMUST00000115333	ENSMUSP00000110989	TRANSLATION	protein_coding	-	CCDS40887.1	1	627	56	1.6	0.5	426.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000054737	Zfp182	ENSMUST00000138123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000054737	Zfp182	ENSMUST00000133186	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000093923	Gm5935	ENSMUST00000101667	ENSMUSP00000099190	TRANSLATION	protein_coding	-	CCDS53022.1	1	212	0	1.2	0.5	38.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093923	Gm5935	ENSMUST00000178986	ENSMUSP00000136892	TRANSLATION	protein_coding	-	CCDS53022.1	5	212	0	1.2	0.5	38.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079628	Rhox4g	ENSMUST00000184625	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079628	Rhox4g	ENSMUST00000115166	ENSMUSP00000110820	TRANSLATION	protein_coding	-	CCDS40940.1	1	205	0	1.1	0.5	40.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059203	Il1rapl2	ENSMUST00000075471	ENSMUSP00000074917	TRANSLATION	protein_coding	-	CCDS30429.1	5	686	0	8.2	6.4	172.9	1	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000059203	Il1rapl2	ENSMUST00000130879	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059203	Il1rapl2	ENSMUST00000113063	ENSMUSP00000108686	TRANSLATION	protein_coding	-	CCDS30429.1	1	686	0	8.2	6.4	172.9	1	1,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000035967	Ints6l	ENSMUST00000039374	ENSMUSP00000035379	TRANSLATION	protein_coding	-	CCDS30145.1	1	861	6	0	0.5	183.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035967	Ints6l	ENSMUST00000132428	ENSMUSP00000138630	TRANSLATION	nonsense_mediated_decay	-	-	2	861	6	0	0.5	183.2	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000035967	Ints6l	ENSMUST00000186445	ENSMUSP00000139507	TRANSLATION	protein_coding	-	CCDS30145.1	2	861	6	0	0.5	183.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035967	Ints6l	ENSMUST00000142624	ENSMUSP00000119095	TRANSLATION	protein_coding	start	-	2	78	2	0	0	95.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035967	Ints6l	ENSMUST00000143142	ENSMUSP00000118865	TRANSLATION	protein_coding	start	-	5	638	2	0	0	106.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035967	Ints6l	ENSMUST00000101553	ENSMUSP00000099089	TRANSLATION	protein_coding	-	-	2	489	4	0	0	76.9	0	-4,-7	-	-	4.002	MINOR
ENSMUSG00000035967	Ints6l	ENSMUST00000134138	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062168	Ppef1	ENSMUST00000071204	ENSMUSP00000071191	TRANSLATION	protein_coding	-	CCDS41200.1	2	650	19	7.49	0.5	156	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000062168	Ppef1	ENSMUST00000135856	ENSMUSP00000123408	TRANSLATION	protein_coding	stop	-	1	237	8	3.56	0	100.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062168	Ppef1	ENSMUST00000136888	ENSMUSP00000121692	TRANSLATION	protein_coding	stop	-	5	56	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095293	Gm10058	ENSMUST00000178152	ENSMUSP00000137449	TRANSLATION	protein_coding	-	CCDS40899.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095293	Gm10058	ENSMUST00000079797	ENSMUSP00000078727	TRANSLATION	protein_coding	-	CCDS40899.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000061778	Mospd2	ENSMUST00000176221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000061778	Mospd2	ENSMUST00000112248	ENSMUSP00000107867	TRANSLATION	protein_coding	-	CCDS72467.1	1	486	0	7.16	6.3	176.7	0	-4,-6	-	-	14	ALTERNATIVE:1
ENSMUSG00000061778	Mospd2	ENSMUST00000134950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061778	Mospd2	ENSMUST00000112247	ENSMUSP00000107866	TRANSLATION	protein_coding	-	CCDS72468.1	1	481	0	7.16	1.5	176.7	0	-4,-6	-	-	12.188	MINOR
ENSMUSG00000061778	Mospd2	ENSMUST00000124523	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061778	Mospd2	ENSMUST00000004715	ENSMUSP00000004715	TRANSLATION	protein_coding	-	CCDS53241.1	1	518	0	7.16	6.3	176.7	0	-4,-6	-	-	14	PRINCIPAL:3
ENSMUSG00000061778	Mospd2	ENSMUST00000146813	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061778	Mospd2	ENSMUST00000139792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000061778	Mospd2	ENSMUST00000154681	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036013	Fam122c	ENSMUST00000114835	ENSMUSP00000110484	TRANSLATION	protein_coding	-	CCDS40973.1	1	180	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036013	Fam122c	ENSMUST00000124137	ENSMUSP00000127499	TRANSLATION	nonsense_mediated_decay	-	-	2	180	0	0	0.5	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036013	Fam122c	ENSMUST00000186314	ENSMUSP00000139776	TRANSLATION	protein_coding	-	CCDS40973.1	2	180	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000045284	Dcaf12l1	ENSMUST00000060481	ENSMUSP00000062991	TRANSLATION	protein_coding	-	CCDS30101.1	1	501	0	0	1.5	18.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045284	Dcaf12l1	ENSMUST00000115056	ENSMUSP00000110708	TRANSLATION	protein_coding	-	CCDS30101.1	1	501	0	0	1.5	18.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031176	Dynlt3	ENSMUST00000033519	ENSMUSP00000033519	TRANSLATION	protein_coding	-	CCDS30011.1	1	116	0	3.33	11.3	90.2	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031176	Dynlt3	ENSMUST00000154091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031176	Dynlt3	ENSMUST00000140019	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031176	Dynlt3	ENSMUST00000125030	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025529	Zfp711	ENSMUST00000122805	ENSMUSP00000118117	TRANSLATION	protein_coding	start/stop	-	3	231	0	0	0	226.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025529	Zfp711	ENSMUST00000113409	ENSMUSP00000109036	TRANSLATION	protein_coding	-	CCDS41106.1	5	805	46	0.28	3.9	549.8	0	-4,-6	-	-	19.414	PRINCIPAL:2
ENSMUSG00000025529	Zfp711	ENSMUST00000151972	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025529	Zfp711	ENSMUST00000071814	ENSMUSP00000071717	TRANSLATION	protein_coding	-	-	5	760	46	0.28	5.1	524.4	0	-4,-6	-	-	18.476	ALTERNATIVE:1
ENSMUSG00000079635	Rhox4c	ENSMUST00000115183	ENSMUSP00000110837	TRANSLATION	protein_coding	-	CCDS40933.1	1	205	0	0.98	0.5	39.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079635	Rhox4c	ENSMUST00000173214	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096966	Gm18336	ENSMUST00000180787	ENSMUSP00000146964	TRANSLATION	protein_coding	-	-	-	765	0	0	0	420	0	-2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000031285	Dcx	ENSMUST00000125768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031285	Dcx	ENSMUST00000033642	ENSMUSP00000033642	TRANSLATION	protein_coding	-	CCDS53209.1	1	366	0	5.3	9.5	144.7	0	-4,-6	-	-	14.34	ALTERNATIVE:1
ENSMUSG00000031285	Dcx	ENSMUST00000139920	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031285	Dcx	ENSMUST00000112856	ENSMUSP00000108477	TRANSLATION	protein_coding	-	CCDS41157.1	1	360	0	5.5	10.3	144.7	0	-4,-6	-	-	15	PRINCIPAL:3
ENSMUSG00000031285	Dcx	ENSMUST00000112851	ENSMUSP00000108472	TRANSLATION	protein_coding	-	CCDS53210.1	1	365	0	5.5	9.5	144.7	0	-4,-6	-	-	14.742	ALTERNATIVE:1
ENSMUSG00000031285	Dcx	ENSMUST00000087313	ENSMUSP00000084570	TRANSLATION	protein_coding	-	CCDS53209.1	1	366	0	5.3	9.5	144.7	0	-4,-6	-	-	14.34	ALTERNATIVE:1
ENSMUSG00000072995	Cpxcr1	ENSMUST00000101269	ENSMUSP00000098827	TRANSLATION	protein_coding	-	CCDS30367.1	1	322	4	0	0.5	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000031387	Renbp	ENSMUST00000114379	ENSMUSP00000110020	TRANSLATION	protein_coding	-	CCDS57763.1	1	416	0	8.83	0.5	121.1	0	-4,-5	-	-	9.15	MINOR
ENSMUSG00000031387	Renbp	ENSMUST00000150241	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031387	Renbp	ENSMUST00000155597	ENSMUSP00000116549	TRANSLATION	protein_coding	-	-	5	419	0	9.33	2.2	151.9	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031387	Renbp	ENSMUST00000146371	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031387	Renbp	ENSMUST00000144771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031387	Renbp	ENSMUST00000135711	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031387	Renbp	ENSMUST00000135213	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031387	Renbp	ENSMUST00000165359	ENSMUSP00000132729	TRANSLATION	nonsense_mediated_decay	-	-	3	48	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031387	Renbp	ENSMUST00000149130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031387	Renbp	ENSMUST00000116578	ENSMUSP00000112277	TRANSLATION	protein_coding	-	CCDS41015.2	1	430	0	9.33	1.5	151.9	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000047996	Prrg1	ENSMUST00000126209	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047996	Prrg1	ENSMUST00000132852	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047996	Prrg1	ENSMUST00000137011	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047996	Prrg1	ENSMUST00000156427	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047996	Prrg1	ENSMUST00000126994	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047996	Prrg1	ENSMUST00000177904	ENSMUSP00000136713	TRANSLATION	protein_coding	-	CCDS53121.1	2	218	10	1.3	7.5	71.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000047996	Prrg1	ENSMUST00000114025	ENSMUSP00000109659	TRANSLATION	protein_coding	-	CCDS53121.1	1	218	10	1.3	7.5	71.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000047996	Prrg1	ENSMUST00000114024	ENSMUSP00000109658	TRANSLATION	protein_coding	-	CCDS53121.1	2	218	10	1.3	7.5	71.6	1	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000047996	Prrg1	ENSMUST00000148345	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047996	Prrg1	ENSMUST00000134602	ENSMUSP00000117104	TRANSLATION	protein_coding	stop	-	3	38	4	0	0	21.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079349	Magea5	ENSMUST00000169540	ENSMUSP00000132644	TRANSLATION	protein_coding	-	CCDS30492.1	5	320	0	0.8	1.5	27	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079349	Magea5	ENSMUST00000069556	ENSMUSP00000065852	TRANSLATION	protein_coding	-	CCDS30492.1	3	320	0	0.8	1.5	27	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031107	Rbmx2	ENSMUST00000139150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031107	Rbmx2	ENSMUST00000033433	ENSMUSP00000033433	TRANSLATION	protein_coding	-	CCDS30114.1	1	326	0	2.66	0.5	72.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000155207	ENSMUSP00000121632	TRANSLATION	protein_coding	stop	-	2	214	0	2.33	0	108.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000152150	ENSMUSP00000115911	TRANSLATION	protein_coding	stop	-	2	58	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000169418	ENSMUSP00000132643	TRANSLATION	protein_coding	-	CCDS30422.1	2	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000113097	ENSMUSP00000108720	TRANSLATION	protein_coding	-	CCDS30422.1	1	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000137979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031422	Morf4l2	ENSMUST00000113095	ENSMUSP00000108718	TRANSLATION	protein_coding	stop	-	3	174	0	1	0	61.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000166930	ENSMUSP00000126363	TRANSLATION	protein_coding	-	CCDS30422.1	3	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000136650	ENSMUSP00000121412	TRANSLATION	protein_coding	stop	-	3	68	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000135731	ENSMUSP00000119517	TRANSLATION	protein_coding	stop	-	1	59	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000137605	ENSMUSP00000115303	TRANSLATION	protein_coding	stop	-	3	204	0	1.75	0	98.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000131923	ENSMUSP00000120404	TRANSLATION	protein_coding	stop	-	2	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031422	Morf4l2	ENSMUST00000164609	ENSMUSP00000129774	TRANSLATION	protein_coding	-	CCDS30422.1	2	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000033797	ENSMUSP00000033797	TRANSLATION	protein_coding	-	CCDS30422.1	1	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000080411	ENSMUSP00000108722	TRANSLATION	protein_coding	-	CCDS30422.1	1	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031422	Morf4l2	ENSMUST00000166478	ENSMUSP00000131909	TRANSLATION	protein_coding	-	CCDS30422.1	2	288	0	3.33	7.5	178.8	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000079655	Gm5168	ENSMUST00000168002	ENSMUSP00000127894	TRANSLATION	protein_coding	-	CCDS40895.1	5	211	0	1.2	0.5	38.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079655	Gm5168	ENSMUST00000089165	ENSMUSP00000086568	TRANSLATION	protein_coding	-	CCDS40895.1	1	211	0	1.2	0.5	38.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067567	Hdac8	ENSMUST00000087916	ENSMUSP00000085226	TRANSLATION	protein_coding	-	CCDS41084.1	1	377	3	9.58	3.9	271.2	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000067567	Hdac8	ENSMUST00000148481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067567	Hdac8	ENSMUST00000154872	ENSMUSP00000138805	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067567	Hdac8	ENSMUST00000154024	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067567	Hdac8	ENSMUST00000137785	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031156	Slc35a2	ENSMUST00000115660	ENSMUSP00000111324	TRANSLATION	protein_coding	-	CCDS52987.1	1	390	0	0	0.5	446.9	19	-3,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000031156	Slc35a2	ENSMUST00000096514	ENSMUSP00000094259	TRANSLATION	protein_coding	-	-	5	242	0	0	0	141	9	-3,-6	-	-	0	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000207114	ENSMUSP00000146809	TRANSLATION	protein_coding	stop	-	5	191	0	0	0	190.9	7	-3,-1	-	-	-1	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000155967	ENSMUSP00000146730	TRANSLATION	nonsense_mediated_decay	-	-	5	390	0	0	0.5	446.9	19	-3,-6	-	-	-1	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000153620	ENSMUSP00000120681	TRANSLATION	protein_coding	start	-	5	223	0	0	0.5	141	9	-3,-6	-	-	-1	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000208397	ENSMUSP00000146635	TRANSLATION	protein_coding	-	-	5	329	0	0	1.2	367.2	10	-3,-1	-	-	1.218	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000208640	ENSMUSP00000146902	TRANSLATION	protein_coding	-	-	5	114	0	0	0	65.4	9	-3,-6	-	-	0	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000115663	ENSMUSP00000111327	TRANSLATION	protein_coding	-	CCDS52986.1	2	393	0	0	1.7	446.9	19	-3,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000031156	Slc35a2	ENSMUST00000123277	ENSMUSP00000116270	TRANSLATION	protein_coding	start	-	3	167	0	0	0	148.1	9	-4,-2	-	-	-1	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000208718	ENSMUSP00000146481	TRANSLATION	non_stop_decay	start/stop	-	5	143	0	0	0	111.4	5	-3,-5	-	-	-1	MINOR
ENSMUSG00000031156	Slc35a2	ENSMUST00000208023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031156	Slc35a2	ENSMUST00000208633	ENSMUSP00000147185	TRANSLATION	protein_coding	stop	-	5	139	0	0	0	180.5	3	-1,-2	-	-	-1	MINOR
ENSMUSG00000094714	Gm16430	ENSMUST00000169006	ENSMUSP00000132567	TRANSLATION	protein_coding	-	CCDS53073.1	3	155	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000094714	Gm16430	ENSMUST00000178145	ENSMUSP00000136901	TRANSLATION	protein_coding	-	CCDS53073.1	1	155	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000023279	Bmp15	ENSMUST00000024049	ENSMUSP00000024049	TRANSLATION	protein_coding	-	CCDS29958.1	1	392	0	0.4	1.5	92	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000062162	Mageb1	ENSMUST00000072269	ENSMUSP00000072119	TRANSLATION	protein_coding	-	CCDS30267.1	-	380	0	0.8	0.5	0	0	-4,0	-	-	6	PRINCIPAL:2
ENSMUSG00000062162	Mageb1	ENSMUST00000099471	ENSMUSP00000097070	TRANSLATION	protein_coding	-	-	-	330	0	0.8	0.5	0	0	-4,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000031226	Pbdc1	ENSMUST00000033577	ENSMUSP00000033577	TRANSLATION	protein_coding	-	CCDS30334.1	1	198	0	2.85	1.5	73.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031226	Pbdc1	ENSMUST00000125343	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031226	Pbdc1	ENSMUST00000119477	ENSMUSP00000113288	TRANSLATION	protein_coding	-	CCDS72419.1	1	137	0	2.45	0.5	55.8	0	-4,-5	-	-	9.738	MINOR
ENSMUSG00000042386	Tex13b	ENSMUST00000132970	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042386	Tex13b	ENSMUST00000044179	ENSMUSP00000046203	TRANSLATION	protein_coding	-	CCDS41152.1	1	186	0	0	0.5	209	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000055733	Nap1l3	ENSMUST00000079490	ENSMUSP00000078453	TRANSLATION	protein_coding	-	CCDS30372.1	-	544	0	0.2	0.5	302.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000059334	Zfp36l3	ENSMUST00000071711	ENSMUSP00000071630	TRANSLATION	protein_coding	-	CCDS30138.1	-	725	8	0	0.5	68.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000035045	Zc3h12b	ENSMUST00000127461	ENSMUSP00000121099	TRANSLATION	protein_coding	start	-	2	53	0	1	0	28.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035045	Zc3h12b	ENSMUST00000082183	ENSMUSP00000080820	TRANSLATION	protein_coding	-	CCDS41069.1	5	835	4	5.65	3.9	214.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000035045	Zc3h12b	ENSMUST00000150123	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035045	Zc3h12b	ENSMUST00000145362	ENSMUSP00000138252	TRANSLATION	nonsense_mediated_decay	start	-	5	114	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000072049	Vmn2r121	ENSMUST00000094491	ENSMUSP00000092067	TRANSLATION	protein_coding	-	CCDS53179.1	5	847	3	2.99	0.5	369.9	0	4,-1	-	-	15	PRINCIPAL:1
ENSMUSG00000072049	Vmn2r121	ENSMUST00000233359	ENSMUSP00000156789	TRANSLATION	nonsense_mediated_decay	-	-	-	89	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000072049	Vmn2r121	ENSMUST00000233504	ENSMUSP00000156535	TRANSLATION	nonsense_mediated_decay	-	-	-	98	0	0	0	0	0	4,-1	-	-	-1	MINOR
ENSMUSG00000089768	Tmsb15b1	ENSMUST00000113071	ENSMUSP00000108694	TRANSLATION	protein_coding	-	CCDS41139.1	2	45	0	1.33	19.5	69	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000041115	Iqsec2	ENSMUST00000112605	ENSMUSP00000108224	TRANSLATION	protein_coding	-	-	5	1488	0	7.73	6.3	406.8	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000041115	Iqsec2	ENSMUST00000168786	ENSMUSP00000127249	TRANSLATION	protein_coding	-	CCDS53224.1	1	1479	0	7.4	0.5	365.8	0	-4,-5	-	-	8.88	MINOR
ENSMUSG00000041115	Iqsec2	ENSMUST00000112604	ENSMUSP00000108223	TRANSLATION	protein_coding	-	-	1	1154	0	7.73	0	406.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000041115	Iqsec2	ENSMUST00000128724	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041115	Iqsec2	ENSMUST00000153356	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041115	Iqsec2	ENSMUST00000096275	ENSMUSP00000093995	TRANSLATION	protein_coding	-	CCDS41177.1	2	949	0	7.73	5.1	406.8	0	-4,-2	-	-	13.548	PRINCIPAL:2
ENSMUSG00000041115	Iqsec2	ENSMUST00000146835	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000053909	Rhox10	ENSMUST00000115150	ENSMUSP00000110803	TRANSLATION	protein_coding	-	CCDS40945.1	1	196	0	1.1	0.5	56.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000048040	Arxes2	ENSMUST00000058119	ENSMUSP00000051250	TRANSLATION	protein_coding	-	CCDS30411.1	-	180	0	0	13.3	189.8	0	-1,-4	-	-	10	PRINCIPAL:1
ENSMUSG00000018589	Glra2	ENSMUST00000058787	ENSMUSP00000060827	TRANSLATION	protein_coding	-	CCDS41206.1	1	452	5	6.5	17	297.6	0	0,-3	-	-	21	PRINCIPAL:1
ENSMUSG00000047230	Cldn2	ENSMUST00000172779	ENSMUSP00000134644	TRANSLATION	protein_coding	stop	-	3	2	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047230	Cldn2	ENSMUST00000054889	ENSMUSP00000054219	TRANSLATION	protein_coding	-	CCDS30437.1	1	230	0	1.4	7.5	76.7	4	2,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000047230	Cldn2	ENSMUST00000135224	ENSMUSP00000121152	TRANSLATION	protein_coding	stop	-	3	131	0	1	0	50.7	2	2,-3	-	-	-1	MINOR
ENSMUSG00000095662	H2al1g	ENSMUST00000179859	ENSMUSP00000137575	TRANSLATION	protein_coding	-	CCDS57733.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000402	Egfl6	ENSMUST00000000412	ENSMUSP00000000412	TRANSLATION	protein_coding	-	CCDS30528.1	1	550	22	5.46	1.5	189	0	3,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000025289	Prdx4	ENSMUST00000026328	ENSMUSP00000026328	TRANSLATION	protein_coding	-	CCDS30496.1	1	274	0	5.83	1.5	165.2	0	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025289	Prdx4	ENSMUST00000130349	ENSMUSP00000122997	TRANSLATION	protein_coding	stop	-	3	229	0	4	0	118	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025289	Prdx4	ENSMUST00000123915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000078315	Fam47c	ENSMUST00000105110	ENSMUSP00000137737	TRANSLATION	protein_coding	-	CCDS59771.1	-	430	0	0	1.5	107.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000002006	Pdzd4	ENSMUST00000114438	ENSMUSP00000110081	TRANSLATION	protein_coding	-	CCDS72393.1	1	657	0	3.1	3.9	49.5	0	-4,-5	-	-	11.398	MINOR
ENSMUSG00000002006	Pdzd4	ENSMUST00000002080	ENSMUSP00000002080	TRANSLATION	protein_coding	-	CCDS30214.1	1	772	0	3.9	3.9	49.5	0	-4,-5	-	-	13	PRINCIPAL:1
ENSMUSG00000023165	Ssxb2	ENSMUST00000103000	ENSMUSP00000100065	TRANSLATION	protein_coding	-	CCDS52991.1	1	128	0	0	0.5	83.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000023165	Ssxb2	ENSMUST00000023931	ENSMUSP00000023931	TRANSLATION	protein_coding	-	CCDS29998.1	1	165	0	0	0.5	83.9	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000031007	Atp6ap2	ENSMUST00000137277	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031007	Atp6ap2	ENSMUST00000033313	ENSMUSP00000033313	TRANSLATION	protein_coding	-	CCDS30023.1	1	350	0	0.72	2.9	118.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000067771	Gm14685	ENSMUST00000088459	ENSMUSP00000085806	TRANSLATION	protein_coding	-	CCDS53093.1	1	695	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000067771	Gm14685	ENSMUST00000179117	ENSMUSP00000137311	TRANSLATION	protein_coding	-	CCDS53093.1	1	695	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000068113	Gm4907	ENSMUST00000116614	ENSMUSP00000112313	TRANSLATION	protein_coding	-	CCDS53019.1	5	411	23	0.6	5.1	229	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000068113	Gm4907	ENSMUST00000163718	ENSMUSP00000136747	TRANSLATION	protein_coding	-	CCDS53019.1	1	411	23	0.6	5.1	229	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031169	Porcn	ENSMUST00000139744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031169	Porcn	ENSMUST00000077595	ENSMUSP00000076790	TRANSLATION	protein_coding	-	CCDS29991.1	1	461	0	0	8.8	71.4	8	-4,-6	-	-	8.6	MINOR
ENSMUSG00000031169	Porcn	ENSMUST00000089403	ENSMUSP00000086825	TRANSLATION	protein_coding	-	CCDS29992.1	1	455	0	0	7.5	68.5	8	-4,-6	-	-	7.922	MINOR
ENSMUSG00000031169	Porcn	ENSMUST00000122943	ENSMUSP00000138626	TRANSLATION	nonsense_mediated_decay	-	-	1	86	0	0	0	0	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000031169	Porcn	ENSMUST00000154695	ENSMUSP00000138661	TRANSLATION	nonsense_mediated_decay	-	-	1	53	0	0	0	0	2	-4,-7	-	-	-1	MINOR
ENSMUSG00000031169	Porcn	ENSMUST00000082320	ENSMUSP00000080937	TRANSLATION	protein_coding	-	CCDS29993.1	1	456	0	0	7.5	69.6	8	-4,-6	-	-	8.018	MINOR
ENSMUSG00000031169	Porcn	ENSMUST00000089402	ENSMUSP00000086824	TRANSLATION	protein_coding	-	CCDS29990.1	1	450	0	0	13	65	8	-4,-6	-	-	9.46	PRINCIPAL:1
ENSMUSG00000109493	Gm45208	ENSMUST00000207461	ENSMUSP00000146594	TRANSLATION	nonsense_mediated_decay,RT	start	-	3	126	0	2.04	0	16.9	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000109493	Gm45208	ENSMUST00000208156	ENSMUSP00000147061	TRANSLATION	protein_coding,RT	-	-	5	292	0	2.55	0	62	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000073267	Gm1993	ENSMUST00000120268	ENSMUSP00000112650	TRANSLATION	protein_coding	-	CCDS53023.1	5	212	0	1.2	0.5	38.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045797	4930402K13Rik	ENSMUST00000059967	ENSMUSP00000053000	TRANSLATION	protein_coding	-	CCDS57728.1	-	415	0	0	0.5	37.9	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000079481	Nhsl2	ENSMUST00000129185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079481	Nhsl2	ENSMUST00000144753	ENSMUSP00000143176	TRANSLATION	protein_coding	stop	-	3	148	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000079481	Nhsl2	ENSMUST00000101339	ENSMUSP00000098893	TRANSLATION	protein_coding	-	CCDS53156.1	5	1219	0	0	0.5	113.2	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000079481	Nhsl2	ENSMUST00000155477	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079481	Nhsl2	ENSMUST00000124279	ENSMUSP00000116112	TRANSLATION	protein_coding	stop	-	3	154	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000079481	Nhsl2	ENSMUST00000125115	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079481	Nhsl2	ENSMUST00000144397	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060967	Etd	ENSMUST00000074232	ENSMUSP00000073854	TRANSLATION	protein_coding	-	-	2	59	0	0	0	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079578	Gm1140	ENSMUST00000114675	ENSMUSP00000110323	TRANSLATION	protein_coding	-	CCDS53082.1	5	229	0	3	0.5	120.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031229	Atrx	ENSMUST00000130980	ENSMUSP00000117528	TRANSLATION	protein_coding	stop	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000138765	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000150914	ENSMUSP00000122034	TRANSLATION	protein_coding	stop	-	1	385	12	4.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000142235	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000101305	ENSMUSP00000098863	TRANSLATION	protein_coding	-	-	1	181	0	0.3	0	0	0	-4,-2	-	-	0	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000146193	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000196998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000141609	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031229	Atrx	ENSMUST00000155445	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000197302	ENSMUSP00000143163	TRANSLATION	nonsense_mediated_decay	start	-	5	135	4	2.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000113573	ENSMUSP00000109203	TRANSLATION	protein_coding	-	CCDS41095.1	1	2476	12	11.752	0.5	269.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031229	Atrx	ENSMUST00000198209	ENSMUSP00000142726	TRANSLATION	protein_coding	start/stop	-	5	526	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000126345	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031229	Atrx	ENSMUST00000198448	ENSMUSP00000143090	TRANSLATION	protein_coding	stop	-	5	520	12	4.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000123174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000134381	ENSMUSP00000122875	TRANSLATION	protein_coding	stop	-	3	238	12	4.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000198567	ENSMUSP00000143007	TRANSLATION	nonsense_mediated_decay	start	-	3	78	0	0.932	0	31.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000143361	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000198441	ENSMUSP00000143565	TRANSLATION	protein_coding	stop	-	5	174	4	1.5	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000154866	ENSMUSP00000121291	TRANSLATION	protein_coding	stop	-	5	208	11	3.63	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000127221	ENSMUSP00000143664	TRANSLATION	nonsense_mediated_decay	start	-	3	12	0	0.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000133543	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031229	Atrx	ENSMUST00000199233	ENSMUSP00000143015	TRANSLATION	protein_coding	stop	-	5	158	10	2.83	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000134507	ENSMUSP00000123085	TRANSLATION	protein_coding	stop	-	1	347	12	4.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000200471	ENSMUSP00000143280	TRANSLATION	protein_coding	start	-	3	334	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000128968	ENSMUSP00000121416	TRANSLATION	protein_coding	stop	-	5	995	12	4.33	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031229	Atrx	ENSMUST00000137453	ENSMUSP00000120246	TRANSLATION	protein_coding	stop	-	3	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079705	Ssxb1	ENSMUST00000037297	ENSMUSP00000037624	TRANSLATION	protein_coding	-	CCDS29997.1	1	170	0	0	0.5	76	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000047844	Bex4	ENSMUST00000116527	ENSMUSP00000112226	TRANSLATION	protein_coding	-	CCDS30414.1	1	118	0	0	1.5	60.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000060890	Arr3	ENSMUST00000113769	ENSMUSP00000109398	TRANSLATION	protein_coding	-	CCDS41075.1	1	381	12	9.81	1.5	176.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000060890	Arr3	ENSMUST00000154771	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060890	Arr3	ENSMUST00000141676	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060890	Arr3	ENSMUST00000164940	ENSMUSP00000132811	TRANSLATION	protein_coding	stop	-	5	115	2	2.58	0	76.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000060890	Arr3	ENSMUST00000135237	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060890	Arr3	ENSMUST00000166688	-	NO_TRANSLATION	retained_intron
ENSMUSG00000060890	Arr3	ENSMUST00000131906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079593	Gm14597	ENSMUST00000129769	ENSMUSP00000123472	TRANSLATION	protein_coding	stop	-	3	200	0	0	0	31.1	0	-4,-6	-	-	-1	PRINCIPAL:5
ENSMUSG00000079593	Gm14597	ENSMUST00000123034	ENSMUSP00000121594	TRANSLATION	protein_coding	stop	-	3	162	0	0	0	31.1	0	-4,-6	-	-	-1	ALTERNATIVE:2
ENSMUSG00000001134	Uxt	ENSMUST00000123836	ENSMUSP00000115342	TRANSLATION	protein_coding	-	CCDS30049.1	1	157	0	0	5.1	62.6	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000001134	Uxt	ENSMUST00000001162	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001134	Uxt	ENSMUST00000150719	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001134	Uxt	ENSMUST00000129899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001134	Uxt	ENSMUST00000147205	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001134	Uxt	ENSMUST00000142341	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000129545	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000063577	ENSMUSP00000068197	TRANSLATION	protein_coding	-	CCDS30315.1	1	1370	24	0.8	1.5	492.1	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000031310	Zmym3	ENSMUST00000117901	ENSMUSP00000112497	TRANSLATION	protein_coding	-	CCDS53155.1	1	1278	24	0.8	0.5	384.8	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000118092	ENSMUSP00000112399	TRANSLATION	protein_coding	-	CCDS53153.1	1	349	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000137416	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031310	Zmym3	ENSMUST00000155040	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031310	Zmym3	ENSMUST00000121429	ENSMUSP00000114118	TRANSLATION	protein_coding	-	CCDS53154.1	1	497	16	0.8	0.5	107.3	0	-4,-5	-	-	6.666	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000120107	ENSMUSP00000113049	TRANSLATION	protein_coding	-	-	5	1356	24	0.8	0	492.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031310	Zmym3	ENSMUST00000117637	ENSMUSP00000113462	TRANSLATION	protein_coding	-	CCDS53153.1	1	349	0	0	0.5	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000147017	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031310	Zmym3	ENSMUST00000120201	ENSMUSP00000114005	TRANSLATION	protein_coding	-	CCDS53154.1	1	497	16	0.8	0.5	107.3	0	-4,-5	-	-	6.666	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000121520	ENSMUSP00000113225	TRANSLATION	protein_coding	-	-	5	1368	24	0.8	1.5	492.1	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031310	Zmym3	ENSMUST00000129586	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000129561	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000143159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000141895	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031310	Zmym3	ENSMUST00000134005	ENSMUSP00000118986	TRANSLATION	protein_coding	stop	-	2	113	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031310	Zmym3	ENSMUST00000119699	ENSMUSP00000112475	TRANSLATION	protein_coding	-	-	5	495	16	0.8	0.5	107.3	0	-4,-5	-	-	6.666	MINOR
ENSMUSG00000031148	Gpkow	ENSMUST00000154562	ENSMUSP00000118248	TRANSLATION	protein_coding	start/stop	-	3	190	0	0	0	26.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031148	Gpkow	ENSMUST00000049896	ENSMUSP00000076178	TRANSLATION	protein_coding	-	CCDS29969.2	1	488	0	0	1.5	100.1	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031148	Gpkow	ENSMUST00000129845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031432	Prps1	ENSMUST00000033809	ENSMUSP00000033809	TRANSLATION	protein_coding	-	CCDS30439.1	1	318	15	7	19.5	288.8	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000031432	Prps1	ENSMUST00000155235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000118638	AL805980.1	ENSMUST00000239206	ENSMUSP00000159230	TRANSLATION	protein_coding	-	-	-	542	0	0	0	335.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000057421	Las1l	ENSMUST00000126605	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057421	Las1l	ENSMUST00000113864	ENSMUSP00000109495	TRANSLATION	protein_coding	-	-	5	776	0	0	0.5	142.4	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000057421	Las1l	ENSMUST00000139717	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057421	Las1l	ENSMUST00000079987	ENSMUSP00000078901	TRANSLATION	protein_coding	-	CCDS30287.1	1	759	0	0	0.5	142.4	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000057421	Las1l	ENSMUST00000137659	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057421	Las1l	ENSMUST00000147994	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057421	Las1l	ENSMUST00000152181	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031154	Otud5	ENSMUST00000033494	ENSMUSP00000033494	TRANSLATION	protein_coding	-	CCDS29975.1	1	566	0	4.75	5.3	60.6	0	-4,-5	-	-	13.838	PRINCIPAL:3
ENSMUSG00000031154	Otud5	ENSMUST00000150644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031154	Otud5	ENSMUST00000115666	ENSMUSP00000111330	TRANSLATION	protein_coding	-	CCDS72336.1	1	567	0	4.75	5.3	60.6	0	-4,-5	-	-	13.838	ALTERNATIVE:1
ENSMUSG00000031154	Otud5	ENSMUST00000152899	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031154	Otud5	ENSMUST00000115668	ENSMUSP00000111332	TRANSLATION	protein_coding	-	CCDS72335.1	1	523	0	4.75	1.5	60.6	0	-4,-5	-	-	12.07	MINOR
ENSMUSG00000031154	Otud5	ENSMUST00000130908	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031154	Otud5	ENSMUST00000148841	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031154	Otud5	ENSMUST00000115665	ENSMUSP00000111329	TRANSLATION	protein_coding	-	-	5	517	0	4.75	0	60.6	0	-4,-5	-	-	11.838	MINOR
ENSMUSG00000031154	Otud5	ENSMUST00000115667	ENSMUSP00000111331	TRANSLATION	protein_coding	-	-	5	571	0	4.75	2.4	62.3	0	-4,-5	-	-	12.652	MINOR
ENSMUSG00000035371	Ssx9	ENSMUST00000103001	ENSMUSP00000100066	TRANSLATION	protein_coding	-	CCDS30000.1	1	170	0	0	0.5	69.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015668	Pdzd11	ENSMUST00000059099	ENSMUSP00000051068	TRANSLATION	protein_coding	-	CCDS30304.1	1	140	3	3.489	19.5	63.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000015668	Pdzd11	ENSMUST00000151548	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000015668	Pdzd11	ENSMUST00000015812	ENSMUSP00000015812	TRANSLATION	protein_coding	-	CCDS30304.1	1	140	3	3.489	19.5	63.4	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000015668	Pdzd11	ENSMUST00000144643	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067649	Mageb18	ENSMUST00000088137	ENSMUSP00000085460	TRANSLATION	protein_coding	-	CCDS30268.1	-	327	0	0.8	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000067649	Mageb18	ENSMUST00000113955	ENSMUSP00000109588	TRANSLATION	protein_coding	-	CCDS30268.1	5	327	0	0.8	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000073255	Gm14632	ENSMUST00000177917	ENSMUSP00000136274	TRANSLATION	protein_coding	-	CCDS53033.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073255	Gm14632	ENSMUST00000101654	ENSMUSP00000099177	TRANSLATION	protein_coding	-	CCDS53033.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095316	Gm21876	ENSMUST00000096511	ENSMUSP00000094256	TRANSLATION	protein_coding	start/stop	-	5	94	0	0	0	30.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000046873	Mbtps2	ENSMUST00000149249	ENSMUSP00000118134	TRANSLATION	protein_coding	stop	-	2	110	3	0	0	0	1	0,-4	-	-	-1	MINOR
ENSMUSG00000046873	Mbtps2	ENSMUST00000139786	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046873	Mbtps2	ENSMUST00000058098	ENSMUSP00000059471	TRANSLATION	protein_coding	-	CCDS30498.1	1	515	3	0	3.9	0	6	1,-3	-	-	1	MINOR
ENSMUSG00000046873	Mbtps2	ENSMUST00000152826	-	NO_TRANSLATION	retained_intron
ENSMUSG00000046873	Mbtps2	ENSMUST00000065857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046873	Mbtps2	ENSMUST00000134211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046873	Mbtps2	ENSMUST00000112522	ENSMUSP00000108141	TRANSLATION	protein_coding	-	-	2	220	3	0	0	0	3	1,-3	-	-	0	MINOR
ENSMUSG00000046873	Mbtps2	ENSMUST00000179062	ENSMUSP00000137233	TRANSLATION	protein_coding	-	CCDS53233.1	2	378	16	0.6	0.5	58.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079583	Gm7073	ENSMUST00000166562	ENSMUSP00000128728	TRANSLATION	protein_coding	-	CCDS40989.2	5	335	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079583	Gm7073	ENSMUST00000114687	ENSMUSP00000110335	TRANSLATION	protein_coding	-	CCDS40989.2	5	335	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000079583	Gm7073	ENSMUST00000190178	ENSMUSP00000139835	TRANSLATION	protein_coding	-	CCDS40989.2	1	335	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037347	Chst7	ENSMUST00000044138	ENSMUSP00000043222	TRANSLATION	protein_coding	-	CCDS30040.1	1	484	0	0	1.5	68	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000073295	Nudt11	ENSMUST00000103007	ENSMUSP00000100072	TRANSLATION	protein_coding	-	CCDS29955.1	1	164	12	1	9.5	69.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000031303	Map3k15	ENSMUST00000033665	ENSMUSP00000033665	TRANSLATION	protein_coding	-	CCDS53236.1	5	1331	19	14.8	1.5	757.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031250	Tnmd	ENSMUST00000033602	ENSMUSP00000033602	TRANSLATION	protein_coding	-	CCDS30386.1	1	317	0	0	7.5	61.2	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000079387	Luzp4	ENSMUST00000163338	ENSMUSP00000126473	TRANSLATION	protein_coding	-	CCDS53213.1	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000079387	Luzp4	ENSMUST00000101185	ENSMUSP00000098745	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000095546	Gm10230	ENSMUST00000178745	ENSMUSP00000136764	TRANSLATION	protein_coding	-	CCDS53029.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095546	Gm10230	ENSMUST00000119362	ENSMUSP00000114126	TRANSLATION	protein_coding	-	CCDS53029.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009406	Elk1	ENSMUST00000148133	-	NO_TRANSLATION	retained_intron
ENSMUSG00000009406	Elk1	ENSMUST00000009550	ENSMUSP00000009550	TRANSLATION	protein_coding	-	CCDS30048.1	1	429	0	1.4	1.5	124.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031255	Sytl4	ENSMUST00000174542	ENSMUSP00000134030	TRANSLATION	protein_coding	stop	-	5	185	9	2.4	0	81.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031255	Sytl4	ENSMUST00000174091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031255	Sytl4	ENSMUST00000113294	ENSMUSP00000108919	TRANSLATION	protein_coding	-	CCDS81169.1	1	502	9	5.4	0.5	150.8	0	-4,-5	-	-	8.388	MINOR
ENSMUSG00000031255	Sytl4	ENSMUST00000113297	ENSMUSP00000108922	TRANSLATION	protein_coding	-	CCDS72429.1	1	502	9	5.56	1.5	150.8	0	-4,-5	-	-	8.9	MINOR
ENSMUSG00000031255	Sytl4	ENSMUST00000033608	ENSMUSP00000033608	TRANSLATION	protein_coding	-	CCDS30388.1	1	673	9	8.18	6.3	218.3	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000072966	Gprasp2	ENSMUST00000137392	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072966	Gprasp2	ENSMUST00000150797	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072966	Gprasp2	ENSMUST00000130034	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072966	Gprasp2	ENSMUST00000134986	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072966	Gprasp2	ENSMUST00000148658	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072966	Gprasp2	ENSMUST00000141953	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072966	Gprasp2	ENSMUST00000142034	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000072966	Gprasp2	ENSMUST00000138251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072966	Gprasp2	ENSMUST00000173804	ENSMUSP00000134666	TRANSLATION	protein_coding	-	CCDS53191.1	1	826	0	0	0.5	196.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072966	Gprasp2	ENSMUST00000113136	ENSMUSP00000108761	TRANSLATION	protein_coding	-	CCDS53191.1	5	826	0	0	0.5	196.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072966	Gprasp2	ENSMUST00000132798	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000071770	Rhox4e	ENSMUST00000089075	ENSMUSP00000086475	TRANSLATION	protein_coding	-	CCDS30078.1	1	205	0	0.98	0.5	39.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071770	Rhox4e	ENSMUST00000184330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096620	Gm5169	ENSMUST00000096469	ENSMUSP00000094211	TRANSLATION	protein_coding	-	CCDS40894.1	1	212	0	1.4	0.5	39.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000002007	Srpk3	ENSMUST00000002081	ENSMUSP00000002081	TRANSLATION	protein_coding	-	CCDS30211.1	1	565	19	10.264	0.5	143.1	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000002007	Srpk3	ENSMUST00000137045	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002007	Srpk3	ENSMUST00000139630	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002007	Srpk3	ENSMUST00000136664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031103	Elf4	ENSMUST00000140486	ENSMUSP00000118436	TRANSLATION	protein_coding	stop	-	1	391	0	1.35	0	221.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031103	Elf4	ENSMUST00000114958	ENSMUSP00000110608	TRANSLATION	protein_coding	-	CCDS30108.1	1	655	0	1.35	0.5	221.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031103	Elf4	ENSMUST00000033429	ENSMUSP00000033429	TRANSLATION	protein_coding	-	CCDS30108.1	5	655	0	1.35	0.5	221.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042498	Radx	ENSMUST00000125750	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042498	Radx	ENSMUST00000046763	ENSMUSP00000046045	TRANSLATION	protein_coding	-	CCDS85808.1	1	849	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000042498	Radx	ENSMUST00000113030	ENSMUSP00000108653	TRANSLATION	protein_coding	-	CCDS30434.1	1	850	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000061082	Plac1	ENSMUST00000074861	ENSMUSP00000074404	TRANSLATION	protein_coding	-	CCDS30128.1	1	173	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000061082	Plac1	ENSMUST00000174390	ENSMUSP00000133862	TRANSLATION	protein_coding	-	CCDS30128.1	3	173	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000061082	Plac1	ENSMUST00000114843	ENSMUSP00000110492	TRANSLATION	protein_coding	-	CCDS30128.1	1	173	0	0	1.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000072888	Samt2	ENSMUST00000101137	ENSMUSP00000098697	TRANSLATION	protein_coding	-	CCDS30487.1	1	247	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000033578	Tmem35a	ENSMUST00000037687	ENSMUSP00000044926	TRANSLATION	protein_coding	-	CCDS30392.1	1	167	0	0	2.7	0	0	-1,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000035776	Cd99l2	ENSMUST00000148177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035776	Cd99l2	ENSMUST00000037391	ENSMUSP00000042606	TRANSLATION	protein_coding	-	CCDS57761.1	1	237	0	0	0.5	234.1	1	3,-2	-	-	6	MINOR
ENSMUSG00000035776	Cd99l2	ENSMUST00000128515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035776	Cd99l2	ENSMUST00000114586	ENSMUSP00000110234	TRANSLATION	protein_coding	-	-	5	190	0	0	0	196.7	1	3,-2	-	-	3.756	MINOR
ENSMUSG00000035776	Cd99l2	ENSMUST00000114587	ENSMUSP00000110235	TRANSLATION	protein_coding	-	-	3	216	0	0	0	216	1	2,-3	-	-	4.914	MINOR
ENSMUSG00000035776	Cd99l2	ENSMUST00000080035	ENSMUSP00000078944	TRANSLATION	protein_coding	-	CCDS30179.1	1	214	0	0	0.5	232.8	1	3,-2	-	-	5.922	PRINCIPAL:1
ENSMUSG00000067909	Slxl1	ENSMUST00000088740	ENSMUSP00000086118	TRANSLATION	protein_coding	-	CCDS53074.1	1	155	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000025246	Tbl1x	ENSMUST00000133893	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025246	Tbl1x	ENSMUST00000088217	ENSMUSP00000085549	TRANSLATION	protein_coding	-	CCDS41036.1	1	527	0	11.93	9.5	212.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031398	Plxna3	ENSMUST00000136114	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031398	Plxna3	ENSMUST00000154062	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000004326	ENSMUSP00000004326	TRANSLATION	protein_coding	-	CCDS30228.1	1	1872	0	31.15	3.9	1247.7	0	3,-1	-	-	13	PRINCIPAL:1
ENSMUSG00000031398	Plxna3	ENSMUST00000152376	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000142236	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000139323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000137484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000152317	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031398	Plxna3	ENSMUST00000148726	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041245	Wnk3	ENSMUST00000131844	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041245	Wnk3	ENSMUST00000149140	ENSMUSP00000139255	TRANSLATION	nonsense_mediated_decay	-	-	5	623	0	6	0	290.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041245	Wnk3	ENSMUST00000096285	ENSMUSP00000138839	TRANSLATION	protein_coding	-	-	5	1789	0	6	0	290.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041245	Wnk3	ENSMUST00000184392	ENSMUSP00000139037	TRANSLATION	protein_coding	-	CCDS72451.1	1	1757	0	6	0.5	290.6	0	-4,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000041245	Wnk3	ENSMUST00000184730	ENSMUSP00000138822	TRANSLATION	protein_coding	-	CCDS72450.1	1	1710	0	6	0.5	290.6	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000041245	Wnk3	ENSMUST00000133852	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042903	Foxo4	ENSMUST00000138437	ENSMUSP00000116165	TRANSLATION	protein_coding	stop	-	5	448	0	1.4	1.2	165.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042903	Foxo4	ENSMUST00000150558	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042903	Foxo4	ENSMUST00000062000	ENSMUSP00000059420	TRANSLATION	protein_coding	-	CCDS41077.1	1	505	0	2.4	2.7	181	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031138	F9	ENSMUST00000033477	ENSMUSP00000033477	TRANSLATION	protein_coding	-	CCDS30158.1	1	471	11	5.73	0.5	366.3	0	0,-3	-	-	18	PRINCIPAL:1
ENSMUSG00000031283	Chrdl1	ENSMUST00000063029	ENSMUSP00000056193	TRANSLATION	protein_coding	-	CCDS53208.1	1	447	0	0.36	0.5	109.3	0	0,-3	-	-	10.698	MINOR
ENSMUSG00000031283	Chrdl1	ENSMUST00000112878	ENSMUSP00000108499	TRANSLATION	protein_coding	-	CCDS53208.1	5	447	0	0.36	0.5	109.3	0	0,-3	-	-	10.698	MINOR
ENSMUSG00000031283	Chrdl1	ENSMUST00000074660	ENSMUSP00000074230	TRANSLATION	protein_coding	-	CCDS30453.1	1	333	0	0.46	0.5	109.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031283	Chrdl1	ENSMUST00000166406	ENSMUSP00000130284	TRANSLATION	protein_coding	-	CCDS30453.1	1	333	0	0.46	0.5	109.3	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031283	Chrdl1	ENSMUST00000207415	ENSMUSP00000146974	TRANSLATION	protein_coding	stop	-	3	159	0	0	0	37.7	0	0,-3	-	-	-1	MINOR
ENSMUSG00000090141	Gm614	ENSMUST00000101358	ENSMUSP00000098910	TRANSLATION	protein_coding	-	CCDS30311.1	1	191	0	0	1.5	118.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000090141	Gm614	ENSMUST00000125656	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031380	Vegfd	ENSMUST00000124851	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031380	Vegfd	ENSMUST00000033751	ENSMUSP00000033751	TRANSLATION	protein_coding	-	CCDS30521.1	1	358	0	2.2	0.5	81.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067276	Capn6	ENSMUST00000087316	ENSMUSP00000084573	TRANSLATION	protein_coding	-	CCDS30455.1	1	641	8	5.17	7.5	454.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000067276	Capn6	ENSMUST00000151154	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079476	1700011M02Rik	ENSMUST00000113602	ENSMUSP00000109232	TRANSLATION	protein_coding	-	-	1	88	0	0	0	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000040522	Tlr8	ENSMUST00000133722	ENSMUSP00000122089	TRANSLATION	protein_coding	stop	-	2	100	0	1	0	33.6	0	2,-2	-	-	-1	MINOR
ENSMUSG00000040522	Tlr8	ENSMUST00000138311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040522	Tlr8	ENSMUST00000049023	ENSMUSP00000036762	TRANSLATION	protein_coding	-	CCDS41209.1	1	1032	0	2	1.5	186.8	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040522	Tlr8	ENSMUST00000112170	ENSMUSP00000107793	TRANSLATION	protein_coding	-	CCDS41209.1	2	1032	0	2	1.5	186.8	1	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000040522	Tlr8	ENSMUST00000148370	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031333	Abcb7	ENSMUST00000140333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031333	Abcb7	ENSMUST00000033695	ENSMUSP00000033695	TRANSLATION	protein_coding	-	CCDS53167.1	1	752	12	11.49	5.1	245.6	0	-2,-1	-	-	20	PRINCIPAL:1
ENSMUSG00000072100	Cldn34b1	ENSMUST00000096852	ENSMUSP00000094615	TRANSLATION	protein_coding	-	CCDS53231.1	1	209	0	0.2	1.5	42.5	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031344	Gabrq	ENSMUST00000033711	ENSMUSP00000033711	TRANSLATION	protein_coding	-	CCDS30188.1	1	638	5	6.1	1.5	264.3	3	3,-3	-	-	16.952	PRINCIPAL:3
ENSMUSG00000031344	Gabrq	ENSMUST00000114553	ENSMUSP00000110200	TRANSLATION	protein_coding	-	CCDS72390.1	1	525	5	6.1	1.5	265.1	3	3,-3	-	-	17	ALTERNATIVE:2
ENSMUSG00000094941	Gm15093	ENSMUST00000179021	ENSMUSP00000136661	TRANSLATION	protein_coding	-	CCDS53214.1	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000015214	Mtmr1	ENSMUST00000156756	ENSMUSP00000115458	TRANSLATION	protein_coding	start/stop	-	1	140	0	3.1	0	26.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015214	Mtmr1	ENSMUST00000146213	ENSMUSP00000117342	TRANSLATION	protein_coding	stop	-	2	187	0	3.83	0	27.2	0	-2,-3	-	-	-1	MINOR
ENSMUSG00000015214	Mtmr1	ENSMUST00000130909	ENSMUSP00000121342	TRANSLATION	protein_coding	start/stop	-	1	149	0	3.1	0	26.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015214	Mtmr1	ENSMUST00000114601	ENSMUSP00000110248	TRANSLATION	protein_coding	-	-	5	671	7	13.91	1.7	534.7	0	-2,-4	-	-	18	ALTERNATIVE:2
ENSMUSG00000015214	Mtmr1	ENSMUST00000132837	ENSMUSP00000121165	TRANSLATION	protein_coding	start/stop	-	5	309	0	6.91	0	132.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000015214	Mtmr1	ENSMUST00000015358	ENSMUSP00000015358	TRANSLATION	protein_coding	-	CCDS30178.1	1	669	7	13.91	1.7	534.7	0	-2,-4	-	-	18	PRINCIPAL:2
ENSMUSG00000015214	Mtmr1	ENSMUST00000130179	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015214	Mtmr1	ENSMUST00000149323	ENSMUSP00000123363	TRANSLATION	protein_coding	start/stop	-	1	132	0	2.935	0	26.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015214	Mtmr1	ENSMUST00000138565	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015214	Mtmr1	ENSMUST00000156307	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037636	Slc25a43	ENSMUST00000133699	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000037636	Slc25a43	ENSMUST00000047655	ENSMUSP00000035392	TRANSLATION	protein_coding	-	CCDS40925.1	1	341	14	2.38	1.7	210.4	0	-2,-4	-	-	18	PRINCIPAL:1
ENSMUSG00000031354	Amelx	ENSMUST00000112118	ENSMUSP00000107746	TRANSLATION	protein_coding	-	CCDS41214.1	1	196	0	0	1.5	223.2	0	4,-1	-	-	6	ALTERNATIVE:2
ENSMUSG00000031354	Amelx	ENSMUST00000066112	ENSMUSP00000065966	TRANSLATION	protein_coding	-	CCDS41213.1	1	219	0	0	1.5	218.1	0	4,-1	-	-	5.694	PRINCIPAL:4
ENSMUSG00000031354	Amelx	ENSMUST00000112120	ENSMUSP00000107748	TRANSLATION	protein_coding	-	CCDS81197.1	1	172	0	0	0.5	109	0	4,-1	-	-	0	MINOR
ENSMUSG00000031354	Amelx	ENSMUST00000154923	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031354	Amelx	ENSMUST00000112119	ENSMUSP00000107747	TRANSLATION	protein_coding	-	-	5	210	0	0	1.5	199.7	0	4,-1	-	-	4.59	MINOR
ENSMUSG00000079697	Gm5751	ENSMUST00000115561	ENSMUSP00000111223	TRANSLATION	protein_coding	start	-	5	147	0	0	0	85.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079637	Rhox2c	ENSMUST00000183655	ENSMUSP00000138977	TRANSLATION	protein_coding	start	-	5	91	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079637	Rhox2c	ENSMUST00000115190	ENSMUSP00000110844	TRANSLATION	protein_coding	-	CCDS53053.1	5	191	0	1.4	0.5	47.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079637	Rhox2c	ENSMUST00000184688	ENSMUSP00000139080	TRANSLATION	protein_coding	-	-	5	183	0	0.9	0.5	34	0	-4,-5	-	-	8.172	MINOR
ENSMUSG00000079637	Rhox2c	ENSMUST00000173574	ENSMUSP00000134224	TRANSLATION	protein_coding	start	-	3	113	0	0.9	0	33.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031289	Il13ra2	ENSMUST00000112827	ENSMUSP00000108446	TRANSLATION	protein_coding	-	CCDS30460.1	1	383	0	6.775	1.5	104.4	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031289	Il13ra2	ENSMUST00000033646	ENSMUSP00000033646	TRANSLATION	protein_coding	-	CCDS30460.1	1	383	0	6.775	1.5	104.4	1	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000025528	2010106E10Rik	ENSMUST00000113412	ENSMUSP00000109039	TRANSLATION	protein_coding	-	CCDS53174.1	1	279	0	0	0.5	22.4	1	2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000025528	2010106E10Rik	ENSMUST00000026602	ENSMUSP00000026602	TRANSLATION	protein_coding	-	CCDS30360.1	1	269	0	0	0.5	0	1	2,-3	-	-	0	MINOR
ENSMUSG00000073294	AU022751	ENSMUST00000117544	ENSMUSP00000114041	TRANSLATION	protein_coding	-	CCDS52981.1	-	589	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000073294	AU022751	ENSMUST00000101698	ENSMUSP00000099222	TRANSLATION	protein_coding	-	CCDS52982.1	1	468	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000101819	H2al1b	ENSMUST00000189531	ENSMUSP00000139582	TRANSLATION	protein_coding	-	CCDS57729.1	-	105	0	0.8	0.5	42.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031392	Irak1	ENSMUST00000033769	ENSMUSP00000033769	TRANSLATION	protein_coding	-	CCDS53105.1	1	750	3	6.3384	0.5	174.8	0	-4,-6	-	-	14.952	ALTERNATIVE:2
ENSMUSG00000031392	Irak1	ENSMUST00000145677	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000140130	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000128436	ENSMUSP00000118570	TRANSLATION	protein_coding	start	-	5	146	0	0.9724	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000146210	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000124417	ENSMUSP00000116167	TRANSLATION	protein_coding	start/stop	-	3	147	1	0.996	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000148317	ENSMUSP00000122519	TRANSLATION	protein_coding	start	-	5	216	0	0.93	0	0	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000114352	ENSMUSP00000109992	TRANSLATION	protein_coding	-	CCDS30219.2	1	710	3	6.1984	1.5	175.6	0	-4,-6	-	-	14.718	PRINCIPAL:3
ENSMUSG00000031392	Irak1	ENSMUST00000144353	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031392	Irak1	ENSMUST00000124580	ENSMUSP00000117379	TRANSLATION	protein_coding	start/stop	-	5	199	1	0.996	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000149871	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000149809	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031392	Irak1	ENSMUST00000132144	ENSMUSP00000117042	TRANSLATION	protein_coding	start/stop	-	5	128	1	1.08	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000114353	ENSMUSP00000109993	TRANSLATION	protein_coding	-	-	5	631	3	5.626	0	170.8	0	-4,-6	-	-	13.29	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000114360	ENSMUSP00000110000	TRANSLATION	protein_coding	-	CCDS53103.1	1	712	3	6.1984	0.5	175.6	0	-4,-6	-	-	14.718	ALTERNATIVE:2
ENSMUSG00000031392	Irak1	ENSMUST00000126583	ENSMUSP00000115508	TRANSLATION	protein_coding	start/stop	-	5	383	3	4.8684	0	102.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000128759	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000068286	ENSMUSP00000064448	TRANSLATION	protein_coding	-	CCDS30219.2	1	710	3	6.1984	1.5	175.6	0	-4,-6	-	-	14.718	PRINCIPAL:3
ENSMUSG00000031392	Irak1	ENSMUST00000101458	ENSMUSP00000099001	TRANSLATION	protein_coding	-	-	5	683	3	5.7484	0	174.2	0	-4,-6	-	-	13.734	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000148706	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031392	Irak1	ENSMUST00000138397	ENSMUSP00000121016	TRANSLATION	protein_coding	start/stop	-	5	257	2	1.93	0	60.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031392	Irak1	ENSMUST00000114354	ENSMUSP00000109994	TRANSLATION	protein_coding	-	CCDS53104.1	1	711	3	6.1984	1.5	175.6	0	-4,-6	-	-	14.718	ALTERNATIVE:2
ENSMUSG00000041096	Tspyl2	ENSMUST00000149685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041096	Tspyl2	ENSMUST00000138918	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041096	Tspyl2	ENSMUST00000177748	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041096	Tspyl2	ENSMUST00000044509	ENSMUSP00000046782	TRANSLATION	protein_coding	-	CCDS30474.1	1	677	0	3.7	0.5	71.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000041096	Tspyl2	ENSMUST00000178165	ENSMUSP00000137121	TRANSLATION	nonsense_mediated_decay	start	-	5	120	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037010	Apln	ENSMUST00000039026	ENSMUSP00000046012	TRANSLATION	protein_coding	-	CCDS40958.1	1	77	0	0	7.6	103.9	0	4,-1	-	-	9	PRINCIPAL:1
ENSMUSG00000036932	Aifm1	ENSMUST00000143466	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036932	Aifm1	ENSMUST00000037349	ENSMUSP00000041104	TRANSLATION	protein_coding	-	CCDS30109.1	1	612	49	13.2	7.5	236.3	1	-4,-1	-	-	18.546	MINOR
ENSMUSG00000036932	Aifm1	ENSMUST00000114945	ENSMUSP00000110595	TRANSLATION	protein_coding	-	CCDS72375.1	5	608	49	13	6.5	277.2	1	-4,0	-	-	20.136	PRINCIPAL:1
ENSMUSG00000036932	Aifm1	ENSMUST00000124623	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036932	Aifm1	ENSMUST00000156795	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079845	Xlr4a	ENSMUST00000114534	ENSMUSP00000110180	TRANSLATION	protein_coding	stop	-	2	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079845	Xlr4a	ENSMUST00000156148	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079845	Xlr4a	ENSMUST00000139191	ENSMUSP00000118018	TRANSLATION	protein_coding	stop	-	5	192	0	1.7	0	129.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079845	Xlr4a	ENSMUST00000078775	ENSMUSP00000077831	TRANSLATION	protein_coding	-	CCDS41005.1	1	215	0	2.12	1.5	129.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031066	Usp11	ENSMUST00000149960	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031066	Usp11	ENSMUST00000127294	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031066	Usp11	ENSMUST00000033383	ENSMUSP00000033383	TRANSLATION	protein_coding	-	CCDS53015.1	2	921	8	12.775	0.5	386.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031066	Usp11	ENSMUST00000137101	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031171	Ftsj1	ENSMUST00000033513	ENSMUSP00000033513	TRANSLATION	protein_coding	-	CCDS29994.1	1	324	20	4.816	5.1	230.9	0	-4,-6	-	-	20	PRINCIPAL:3
ENSMUSG00000031171	Ftsj1	ENSMUST00000147467	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031171	Ftsj1	ENSMUST00000126924	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031171	Ftsj1	ENSMUST00000149063	ENSMUSP00000121646	TRANSLATION	protein_coding	start	-	5	111	0	0.346	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031171	Ftsj1	ENSMUST00000115595	ENSMUSP00000111258	TRANSLATION	protein_coding	-	CCDS72340.1	1	322	20	4.816	3.9	230.9	0	-4,-6	-	-	19.414	ALTERNATIVE:2
ENSMUSG00000031171	Ftsj1	ENSMUST00000144953	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031171	Ftsj1	ENSMUST00000115594	ENSMUSP00000111257	TRANSLATION	protein_coding	-	-	5	308	20	4.816	1	230.9	0	-4,-6	-	-	18	MINOR
ENSMUSG00000047678	Gpr82	ENSMUST00000053659	ENSMUSP00000062535	TRANSLATION	protein_coding	-	CCDS30029.1	1	328	0	0.36	1.5	77.8	0	-3,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000057439	Kir3dl2	ENSMUST00000113108	ENSMUSP00000108732	TRANSLATION	protein_coding	-	CCDS41133.1	1	388	0	3.48	0.5	58.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000057439	Kir3dl2	ENSMUST00000072125	ENSMUSP00000071994	TRANSLATION	protein_coding	-	CCDS41133.1	1	388	0	3.48	0.5	58.5	1	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000100626	H2al1a	ENSMUST00000188439	ENSMUSP00000140925	TRANSLATION	protein_coding	-	CCDS53003.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031383	Dusp9	ENSMUST00000019701	ENSMUSP00000019701	TRANSLATION	protein_coding	-	CCDS30206.1	1	452	9	2.4	0.5	166.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000005864	Cnga2	ENSMUST00000145642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000005864	Cnga2	ENSMUST00000006020	ENSMUSP00000006020	TRANSLATION	protein_coding	-	CCDS30184.1	1	664	13	2.44	6.3	251.1	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000058932	Gm2174	ENSMUST00000079663	ENSMUSP00000131256	TRANSLATION	protein_coding	start	-	-	133	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000096468	Gm16405	ENSMUST00000180150	ENSMUSP00000136138	TRANSLATION	protein_coding	-	CCDS53072.1	1	155	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000096468	Gm16405	ENSMUST00000169247	ENSMUSP00000136048	TRANSLATION	protein_coding	-	CCDS53072.1	3	155	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000072249	Fthl17f	ENSMUST00000097029	ENSMUSP00000094793	TRANSLATION	protein_coding	-	CCDS40854.1	-	176	0	1	1.5	91.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015340	Cybb	ENSMUST00000015484	ENSMUSP00000015484	TRANSLATION	protein_coding	-	CCDS30010.1	1	570	0	4.28	6.3	108.9	7	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000015340	Cybb	ENSMUST00000154503	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015340	Cybb	ENSMUST00000170885	ENSMUSP00000128993	TRANSLATION	protein_coding	stop	-	3	93	0	0	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000015340	Cybb	ENSMUST00000131591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015340	Cybb	ENSMUST00000164685	ENSMUSP00000128963	TRANSLATION	nonsense_mediated_decay	-	-	5	114	0	0	0	0	4	-1,-5	-	-	-1	MINOR
ENSMUSG00000001986	Gria3	ENSMUST00000128197	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001986	Gria3	ENSMUST00000139965	ENSMUSP00000116381	TRANSLATION	nonsense_mediated_decay	-	-	5	818	15	14.1	1	529.9	3	3,-3	-	-	-1	MINOR
ENSMUSG00000001986	Gria3	ENSMUST00000156721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001986	Gria3	ENSMUST00000126843	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001986	Gria3	ENSMUST00000124169	ENSMUSP00000117766	TRANSLATION	protein_coding	stop	-	3	83	0	2	0	44.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000001986	Gria3	ENSMUST00000115103	ENSMUSP00000110755	TRANSLATION	protein_coding	-	CCDS72370.1	5	888	15	15.1	5.5	553.4	4	3,-3	-	-	19.682	ALTERNATIVE:1
ENSMUSG00000001986	Gria3	ENSMUST00000165288	ENSMUSP00000131523	TRANSLATION	protein_coding	-	CCDS72370.1	1	888	15	15.1	5.5	553.4	4	3,-3	-	-	19.682	ALTERNATIVE:1
ENSMUSG00000001986	Gria3	ENSMUST00000076349	ENSMUSP00000075687	TRANSLATION	protein_coding	-	CCDS30097.1	1	888	15	15.18	5.5	556	4	3,-3	-	-	20	PRINCIPAL:3
ENSMUSG00000001986	Gria3	ENSMUST00000148212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051592	Ccnb3	ENSMUST00000056725	ENSMUSP00000052272	TRANSLATION	protein_coding	-	CCDS29961.1	5	1396	0	4.49	0.5	204.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051592	Ccnb3	ENSMUST00000115752	ENSMUSP00000111418	TRANSLATION	protein_coding	-	CCDS29961.1	1	1396	0	4.49	0.5	204.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025271	Pfkfb1	ENSMUST00000124381	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025271	Pfkfb1	ENSMUST00000142848	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025271	Pfkfb1	ENSMUST00000080884	ENSMUSP00000079692	TRANSLATION	protein_coding	-	CCDS30464.1	1	448	20	11.594	10.6	344.6	0	-4,-5	-	-	19.878	PRINCIPAL:2
ENSMUSG00000025271	Pfkfb1	ENSMUST00000154528	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025271	Pfkfb1	ENSMUST00000112713	ENSMUSP00000108333	TRANSLATION	protein_coding	-	-	5	471	20	12.13	8.9	345.4	0	-4,-2	-	-	20.469	ALTERNATIVE:1
ENSMUSG00000025271	Pfkfb1	ENSMUST00000150783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025271	Pfkfb1	ENSMUST00000153221	ENSMUSP00000115844	TRANSLATION	protein_coding	stop	-	5	198	8	5.594	0	297.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000003	Pbsn	ENSMUST00000114041	ENSMUSP00000109675	TRANSLATION	protein_coding	-	-	2	137	0	3.059	0	26.2	0	2,-2	-	-	6.954	MINOR
ENSMUSG00000000003	Pbsn	ENSMUST00000000003	ENSMUSP00000000003	TRANSLATION	protein_coding	-	CCDS30249.1	1	174	0	3.659	1.5	72.9	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031390	Avpr2	ENSMUST00000033765	ENSMUSP00000033765	TRANSLATION	protein_coding	-	CCDS30216.1	1	371	0	2.84	6.3	160.8	9	-3,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031390	Avpr2	ENSMUST00000131088	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031390	Avpr2	ENSMUST00000101470	ENSMUSP00000099011	TRANSLATION	protein_coding	-	CCDS72396.1	1	334	0	1.48	0.5	108.5	6	-4,-7	-	-	5.988	MINOR
ENSMUSG00000031390	Avpr2	ENSMUST00000114395	ENSMUSP00000110037	TRANSLATION	protein_coding	-	CCDS72397.1	1	160	0	2.36	0.5	57.8	3	-3,-6	-	-	4.986	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000101198	ENSMUSP00000098759	TRANSLATION	protein_coding	-	CCDS57778.1	3	148	0	0	7.5	207.1	6	4,-1	-	-	3	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000151914	ENSMUSP00000116443	TRANSLATION	protein_coding	start	-	3	121	0	0	0	110.3	6	-2,-5	-	-	-1	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000087333	ENSMUSP00000084591	TRANSLATION	protein_coding	-	CCDS30451.1	1	296	0	0	7.5	395.2	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000047045	Tmem164	ENSMUST00000112888	ENSMUSP00000108509	TRANSLATION	protein_coding	-	-	3	82	0	0	0	95.8	0	-2,-5	-	-	0	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000112889	ENSMUSP00000108510	TRANSLATION	protein_coding	-	CCDS57778.1	1	148	0	0	7.5	207.1	6	4,-1	-	-	3	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000133634	ENSMUSP00000138503	TRANSLATION	nonsense_mediated_decay	-	-	1	296	0	0	7.5	395.2	6	-4,-7	-	-	-1	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000112896	ENSMUSP00000108517	TRANSLATION	protein_coding	-	CCDS30451.1	1	296	0	0	7.5	395.2	6	-4,-7	-	-	9	PRINCIPAL:1
ENSMUSG00000047045	Tmem164	ENSMUST00000112891	ENSMUSP00000108512	TRANSLATION	protein_coding	-	-	5	133	0	0	0	125.7	4	-4,-6	-	-	0	MINOR
ENSMUSG00000047045	Tmem164	ENSMUST00000124211	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031210	Gpr165	ENSMUST00000130276	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031210	Gpr165	ENSMUST00000033554	ENSMUSP00000033554	TRANSLATION	protein_coding	-	CCDS30291.1	1	455	0	2.3	0.5	136.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031210	Gpr165	ENSMUST00000139205	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031210	Gpr165	ENSMUST00000137479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025287	Acot9	ENSMUST00000126200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025287	Acot9	ENSMUST00000134662	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025287	Acot9	ENSMUST00000026324	ENSMUSP00000026324	TRANSLATION	protein_coding	-	CCDS41187.1	1	439	21	4.24	1.5	0	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000025287	Acot9	ENSMUST00000131332	ENSMUSP00000138519	TRANSLATION	nonsense_mediated_decay	-	-	1	50	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031101	Sash3	ENSMUST00000033427	ENSMUSP00000033427	TRANSLATION	protein_coding	-	CCDS40959.1	1	380	0	3	7.5	220.8	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000034755	Pcdh11x	ENSMUST00000191653	ENSMUSP00000141600	TRANSLATION	protein_coding	start	-	1	496	0	0	0	209.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034755	Pcdh11x	ENSMUST00000192977	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034755	Pcdh11x	ENSMUST00000195088	ENSMUSP00000142050	TRANSLATION	nonsense_mediated_decay	-	-	1	1128	63	1.16	0	651.8	1	0,-3	-	-	-1	MINOR
ENSMUSG00000034755	Pcdh11x	ENSMUST00000155223	ENSMUSP00000138407	TRANSLATION	nonsense_mediated_decay	start	-	1	304	0	0	0	209.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000034755	Pcdh11x	ENSMUST00000192677	ENSMUSP00000141522	TRANSLATION	protein_coding	-	-	5	1338	63	1.16	1.5	651.8	1	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000034755	Pcdh11x	ENSMUST00000113364	ENSMUSP00000108991	TRANSLATION	protein_coding	-	-	5	1338	63	1.16	1.5	651.8	1	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000034755	Pcdh11x	ENSMUST00000050239	ENSMUSP00000052340	TRANSLATION	protein_coding	-	-	5	1334	63	1.16	0	651.8	1	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000034755	Pcdh11x	ENSMUST00000113358	ENSMUSP00000108985	TRANSLATION	protein_coding	-	CCDS72426.1	5	1320	63	1.16	0.5	651.8	1	0,-3	-	-	18	PRINCIPAL:2
ENSMUSG00000034755	Pcdh11x	ENSMUST00000193899	ENSMUSP00000141581	TRANSLATION	protein_coding	-	-	5	1026	63	1.16	2.4	651.8	1	0,-3	-	-	18	ALTERNATIVE:2
ENSMUSG00000051228	Nyx	ENSMUST00000050434	ENSMUSP00000056313	TRANSLATION	protein_coding	-	CCDS40877.1	1	476	0	0.48	1.5	162	0	4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000057000	Nxf3	ENSMUST00000138878	ENSMUSP00000121486	TRANSLATION	protein_coding	stop	-	3	103	0	0.93	0	23.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000057000	Nxf3	ENSMUST00000080929	ENSMUSP00000079730	TRANSLATION	protein_coding	-	CCDS41132.1	1	553	0	10.145	0.5	216.1	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000031299	Pdha1	ENSMUST00000156531	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031299	Pdha1	ENSMUST00000126440	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031299	Pdha1	ENSMUST00000033662	ENSMUSP00000033662	TRANSLATION	protein_coding	-	CCDS41195.1	1	390	15	9.25	8.8	416.4	0	-3,1	-	-	21	PRINCIPAL:1
ENSMUSG00000031299	Pdha1	ENSMUST00000127535	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025742	Prps2	ENSMUST00000026839	ENSMUSP00000026839	TRANSLATION	protein_coding	-	CCDS30532.1	1	318	15	7	19.5	284.6	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025742	Prps2	ENSMUST00000145456	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052372	Il1rapl1	ENSMUST00000078875	ENSMUSP00000077915	TRANSLATION	protein_coding	-	CCDS53128.1	5	696	0	8.75	11.6	154	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000052372	Il1rapl1	ENSMUST00000113966	ENSMUSP00000109599	TRANSLATION	protein_coding	-	CCDS53128.1	5	696	0	8.75	11.6	154	1	-1,-4	-	-	15	PRINCIPAL:1
ENSMUSG00000052372	Il1rapl1	ENSMUST00000113964	ENSMUSP00000109597	TRANSLATION	protein_coding	-	-	1	383	0	6.35	0	58.6	0	-1,-4	-	-	1.476	MINOR
ENSMUSG00000096508	Gm7903	ENSMUST00000179953	ENSMUSP00000137277	TRANSLATION	protein_coding	-	-	1	462	0	0	1.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000096508	Gm7903	ENSMUST00000113172	ENSMUSP00000108797	TRANSLATION	protein_coding	-	CCDS57774.1	1	463	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:2
ENSMUSG00000053852	Adgrg4	ENSMUST00000096431	ENSMUSP00000094165	TRANSLATION	protein_coding	-	-	2	216	0	0.88	0	39.6	2	-3,-4	-	-	0	MINOR
ENSMUSG00000053852	Adgrg4	ENSMUST00000136396	ENSMUSP00000116655	TRANSLATION	protein_coding	start	-	5	2736	0	5.16	0	199.1	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000053852	Adgrg4	ENSMUST00000153784	ENSMUSP00000116634	TRANSLATION	protein_coding	-	-	5	3073	0	5.56	0	203.4	3	-2,-5	-	-	12	PRINCIPAL:5
ENSMUSG00000053852	Adgrg4	ENSMUST00000145035	ENSMUSP00000122908	TRANSLATION	protein_coding	start	-	3	205	0	0.84	0	53.8	3	-3,-5	-	-	-1	MINOR
ENSMUSG00000053852	Adgrg4	ENSMUST00000168724	ENSMUSP00000127627	TRANSLATION	protein_coding	start/stop	-	-	177	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000053852	Adgrg4	ENSMUST00000154818	ENSMUSP00000119486	TRANSLATION	protein_coding	-	-	5	2868	0	5.24	0	203.4	3	1,-4	-	-	11.358	ALTERNATIVE:2
ENSMUSG00000096457	Gm10147	ENSMUST00000178966	ENSMUSP00000136201	TRANSLATION	protein_coding	-	CCDS53030.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096457	Gm10147	ENSMUST00000075388	ENSMUSP00000074848	TRANSLATION	protein_coding	-	CCDS53030.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096097	H2al1c	ENSMUST00000178806	ENSMUSP00000135929	TRANSLATION	protein_coding	-	CCDS57730.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000037358	Dipk2b	ENSMUST00000044188	ENSMUSP00000046567	TRANSLATION	protein_coding	-	CCDS30038.1	1	435	0	0	0.5	143	0	1,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000037358	Dipk2b	ENSMUST00000147039	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000023443	Esx1	ENSMUST00000155283	ENSMUSP00000133711	TRANSLATION	protein_coding	stop	-	3	99	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023443	Esx1	ENSMUST00000074698	ENSMUSP00000074262	TRANSLATION	protein_coding	-	CCDS53199.1	1	382	0	1.3	0.5	77.4	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000023443	Esx1	ENSMUST00000113066	ENSMUSP00000108689	TRANSLATION	protein_coding	-	-	1	314	0	1.3	0.5	77.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000025260	Hsd17b10	ENSMUST00000140804	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025260	Hsd17b10	ENSMUST00000112617	ENSMUSP00000108236	TRANSLATION	protein_coding	-	-	5	271	28	5.5148	0	155.3	0	-2,0	-	-	17.328	MINOR
ENSMUSG00000025260	Hsd17b10	ENSMUST00000151200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025260	Hsd17b10	ENSMUST00000026289	ENSMUSP00000026289	TRANSLATION	protein_coding	-	CCDS30471.1	1	261	28	5.33	9.5	166.5	0	-2,0	-	-	20.628	PRINCIPAL:1
ENSMUSG00000031262	Cenpi	ENSMUST00000081064	ENSMUSP00000079851	TRANSLATION	protein_coding	-	CCDS30393.1	1	746	0	0	1.5	893.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031262	Cenpi	ENSMUST00000144678	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031262	Cenpi	ENSMUST00000101251	ENSMUSP00000098809	TRANSLATION	protein_coding	-	CCDS30393.1	1	746	0	0	1.5	893.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031262	Cenpi	ENSMUST00000129782	ENSMUSP00000117799	TRANSLATION	protein_coding	stop	-	2	31	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031262	Cenpi	ENSMUST00000125604	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031181	Ctag2	ENSMUST00000033524	ENSMUSP00000033524	TRANSLATION	protein_coding	-	CCDS30168.1	1	219	0	0	0.5	53.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000019558	Slc6a8	ENSMUST00000166200	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019558	Slc6a8	ENSMUST00000164449	ENSMUSP00000126076	TRANSLATION	protein_coding	-	-	5	625	0	11.782	1.2	770.9	21	-4,-5	-	-	9.404	MINOR
ENSMUSG00000019558	Slc6a8	ENSMUST00000114465	ENSMUSP00000110109	TRANSLATION	protein_coding	-	CCDS53098.1	1	635	0	12.112	5.1	804.8	23	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019558	Slc6a8	ENSMUST00000170614	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019558	Slc6a8	ENSMUST00000171398	ENSMUSP00000128079	TRANSLATION	protein_coding	stop	-	3	107	0	1.698	0	129.8	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000019558	Slc6a8	ENSMUST00000168831	ENSMUSP00000132921	TRANSLATION	protein_coding	start	-	1	576	0	12.112	0	779.6	21	-4,-5	-	-	-1	MINOR
ENSMUSG00000019558	Slc6a8	ENSMUST00000033752	ENSMUSP00000033752	TRANSLATION	protein_coding	-	CCDS30208.1	1	640	0	12.112	0.5	795.7	23	-4,-5	-	-	11.454	MINOR
ENSMUSG00000019558	Slc6a8	ENSMUST00000146796	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019558	Slc6a8	ENSMUST00000114464	ENSMUSP00000110108	TRANSLATION	nonsense_mediated_decay	start	-	1	19	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000019558	Slc6a8	ENSMUST00000167828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019558	Slc6a8	ENSMUST00000170574	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019558	Slc6a8	ENSMUST00000114467	ENSMUSP00000110111	TRANSLATION	protein_coding	-	CCDS53098.1	1	635	0	12.112	5.1	804.8	23	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000019558	Slc6a8	ENSMUST00000168764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031352	Hccs	ENSMUST00000112115	ENSMUSP00000107743	TRANSLATION	protein_coding	-	CCDS30535.1	1	272	0	0	5.1	239.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031352	Hccs	ENSMUST00000154638	ENSMUSP00000133731	TRANSLATION	nonsense_mediated_decay	-	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031352	Hccs	ENSMUST00000033717	ENSMUSP00000033717	TRANSLATION	protein_coding	-	CCDS30535.1	1	272	0	0	5.1	239.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031130	Brs3	ENSMUST00000033464	ENSMUSP00000033464	TRANSLATION	protein_coding	-	CCDS30150.1	1	399	0	1.68	6.3	188.8	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000049047	Armcx3	ENSMUST00000086884	ENSMUSP00000084097	TRANSLATION	protein_coding	-	CCDS30400.1	5	379	0	0	7.5	379.8	1	-1,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000049047	Armcx3	ENSMUST00000086880	ENSMUSP00000084093	TRANSLATION	protein_coding	-	CCDS30400.1	2	379	0	0	7.5	379.8	1	-1,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000049047	Armcx3	ENSMUST00000081834	ENSMUSP00000080518	TRANSLATION	protein_coding	-	CCDS30400.1	1	379	0	0	7.5	379.8	1	-1,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000079619	Cypt15	ENSMUST00000115114	ENSMUSP00000110767	TRANSLATION	protein_coding	-	CCDS53062.1	1	87	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000025265	Fgd1	ENSMUST00000026296	ENSMUSP00000026296	TRANSLATION	protein_coding	-	CCDS30467.1	1	960	5	8.67	4.1	297.5	0	-4,-6	-	-	18	PRINCIPAL:2
ENSMUSG00000025265	Fgd1	ENSMUST00000112685	ENSMUSP00000108305	TRANSLATION	protein_coding	-	-	5	791	5	8.67	1.5	297.5	0	-4,-7	-	-	17.161	ALTERNATIVE:2
ENSMUSG00000025265	Fgd1	ENSMUST00000124882	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025265	Fgd1	ENSMUST00000125620	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096867	Samt1c	ENSMUST00000144098	ENSMUSP00000116409	TRANSLATION	protein_coding	-	CCDS57781.1	2	237	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000059327	Eda	ENSMUST00000134582	-	NO_TRANSLATION	retained_intron
ENSMUSG00000059327	Eda	ENSMUST00000113776	ENSMUSP00000109406	TRANSLATION	protein_coding	-	CCDS53142.1	1	351	0	2.28	0.5	0	1	-4,-7	-	-	4.002	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000071453	ENSMUSP00000071397	TRANSLATION	protein_coding	-	CCDS53144.1	1	383	0	3.28	0.5	33.3	1	-4,-7	-	-	11.598	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000113779	ENSMUSP00000109409	TRANSLATION	protein_coding	-	CCDS30299.1	1	391	0	3.28	6.3	33.3	1	-4,-7	-	-	13.598	PRINCIPAL:3
ENSMUSG00000059327	Eda	ENSMUST00000145063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059327	Eda	ENSMUST00000113775	ENSMUSP00000109405	TRANSLATION	protein_coding	-	CCDS53142.1	1	351	0	2.28	0.5	0	1	-4,-7	-	-	4.002	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000123547	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000059327	Eda	ENSMUST00000113778	ENSMUSP00000109408	TRANSLATION	protein_coding	-	CCDS53143.1	1	386	0	3.28	6.3	35.7	1	-4,-7	-	-	14	ALTERNATIVE:1
ENSMUSG00000059327	Eda	ENSMUST00000113777	ENSMUSP00000109407	TRANSLATION	protein_coding	-	CCDS53142.1	5	351	0	2.28	0.5	0	1	-4,-7	-	-	4.002	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000113783	ENSMUSP00000109413	TRANSLATION	protein_coding	-	-	5	383	0	3.28	0.5	33.3	1	-4,-7	-	-	11.598	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000113781	ENSMUSP00000109411	TRANSLATION	protein_coding	-	CCDS53145.1	1	378	0	3.28	0.5	35.7	1	-4,-7	-	-	12	MINOR
ENSMUSG00000059327	Eda	ENSMUST00000113780	ENSMUSP00000109410	TRANSLATION	protein_coding	-	CCDS53141.1	1	377	0	2.78	2.7	0	1	-4,-7	-	-	5.64	MINOR
ENSMUSG00000031142	Cacna1f	ENSMUST00000157000	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031142	Cacna1f	ENSMUST00000144522	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031142	Cacna1f	ENSMUST00000133637	ENSMUSP00000116051	TRANSLATION	protein_coding	stop	-	1	844	0	13.59	0	418.6	11	-4,-5	-	-	-1	MINOR
ENSMUSG00000031142	Cacna1f	ENSMUST00000155090	ENSMUSP00000138116	TRANSLATION	nonsense_mediated_decay	-	-	5	431	0	7.4	0	236.4	6	-4,-5	-	-	-1	MINOR
ENSMUSG00000031142	Cacna1f	ENSMUST00000115725	ENSMUSP00000111390	TRANSLATION	protein_coding	-	-	5	1977	4	33.74	1	1589	19	-4,-5	-	-	15.514	ALTERNATIVE:2
ENSMUSG00000031142	Cacna1f	ENSMUST00000151208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031142	Cacna1f	ENSMUST00000128628	ENSMUSP00000119207	TRANSLATION	protein_coding	stop	-	3	229	0	5.698	0	241.3	4	-4,-7	-	-	-1	MINOR
ENSMUSG00000031142	Cacna1f	ENSMUST00000115726	ENSMUSP00000111391	TRANSLATION	protein_coding	-	CCDS40840.1	1	1984	4	33.938	0.5	1590.5	19	-4,-5	-	-	16	PRINCIPAL:2
ENSMUSG00000031142	Cacna1f	ENSMUST00000141634	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031142	Cacna1f	ENSMUST00000156047	ENSMUSP00000115012	TRANSLATION	protein_coding	stop	-	5	247	4	6.5	0	276.7	4	-4,0	-	-	-1	MINOR
ENSMUSG00000031142	Cacna1f	ENSMUST00000123979	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079626	Rhox7b	ENSMUST00000115156	ENSMUSP00000110809	TRANSLATION	protein_coding	-	-	1	321	0	3.6	0	94.8	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031241	Tbx22	ENSMUST00000068451	ENSMUSP00000063611	TRANSLATION	protein_coding	-	CCDS72420.1	1	315	0	1.55	0.5	95.4	0	-4,-5	-	-	0.642	MINOR
ENSMUSG00000031241	Tbx22	ENSMUST00000168403	ENSMUSP00000127321	TRANSLATION	protein_coding	-	CCDS72420.1	1	315	0	1.55	0.5	95.4	0	-4,-5	-	-	0.642	MINOR
ENSMUSG00000031241	Tbx22	ENSMUST00000168174	ENSMUSP00000128247	TRANSLATION	protein_coding	-	CCDS30351.2	2	531	0	4.23	1.5	260.1	0	-3,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000031241	Tbx22	ENSMUST00000118986	ENSMUSP00000112544	TRANSLATION	protein_coding	-	CCDS30350.1	5	517	0	4.23	1.5	260.1	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031241	Tbx22	ENSMUST00000172682	ENSMUSP00000133607	TRANSLATION	nonsense_mediated_decay	-	-	3	82	0	0	0	0	0	-3,-5	-	-	-1	MINOR
ENSMUSG00000071723	Gspt2	ENSMUST00000096368	ENSMUSP00000109523	TRANSLATION	protein_coding	-	CCDS41064.1	-	632	16	1	1.5	316.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000071723	Gspt2	ENSMUST00000137033	ENSMUSP00000139286	TRANSLATION	nonsense_mediated_decay	-	-	2	129	0	0	0	26.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095741	Rhox2f	ENSMUST00000184546	ENSMUSP00000139352	TRANSLATION	protein_coding	start	-	5	91	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095741	Rhox2f	ENSMUST00000115173	ENSMUSP00000110827	TRANSLATION	protein_coding	-	CCDS53057.1	5	191	0	1.4	0.5	49.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000047485	Klhl34	ENSMUST00000087157	ENSMUSP00000084399	TRANSLATION	protein_coding	-	CCDS41191.1	-	644	0	0.2	1.7	155.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000025288	4933436I01Rik	ENSMUST00000026325	ENSMUSP00000026325	TRANSLATION	protein_coding	-	CCDS30170.1	1	429	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000073094	Smim9	ENSMUST00000165080	ENSMUSP00000132737	TRANSLATION	protein_coding	-	CCDS53113.1	3	137	0	0	0.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000073094	Smim9	ENSMUST00000141041	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073094	Smim9	ENSMUST00000101433	ENSMUSP00000098976	TRANSLATION	protein_coding	-	CCDS53113.1	1	137	0	0	0.5	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000098348	Btg1c	ENSMUST00000184452	-	NO_TRANSLATION	transcribed_unprocessed_pseudogene
ENSMUSG00000098348	Btg1c	ENSMUST00000184977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000098348	Btg1c	ENSMUST00000089060	ENSMUSP00000094192	TRANSLATION	protein_coding	-	CCDS53061.1	1	161	0	1	1.5	137.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031353	Rbbp7	ENSMUST00000112326	ENSMUSP00000107945	TRANSLATION	protein_coding	-	-	1	386	0	9.37	0	170.4	0	-4,-6	-	-	7.662	MINOR
ENSMUSG00000031353	Rbbp7	ENSMUST00000138791	ENSMUSP00000114734	TRANSLATION	protein_coding	start/stop	-	3	235	0	4.66	0	105.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031353	Rbbp7	ENSMUST00000033720	ENSMUSP00000033720	TRANSLATION	protein_coding	-	CCDS30509.1	1	425	0	10.82	14.3	194.4	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000031353	Rbbp7	ENSMUST00000112327	ENSMUSP00000107946	TRANSLATION	protein_coding	-	-	5	416	0	10.49	2.4	194.4	0	-4,-6	-	-	11.76	MINOR
ENSMUSG00000031353	Rbbp7	ENSMUST00000143681	ENSMUSP00000115354	TRANSLATION	protein_coding	start	-	1	76	0	2	0	24	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079606	Fsip2l	ENSMUST00000114928	ENSMUSP00000110578	TRANSLATION	protein_coding	-	CCDS40962.1	1	655	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000095474	Cldn34c2	ENSMUST00000178457	ENSMUSP00000136861	TRANSLATION	protein_coding	start	-	5	233	0	0	0.5	0	3	-4,0	-	-	-1	MINOR
ENSMUSG00000095474	Cldn34c2	ENSMUST00000238499	ENSMUSP00000158666	TRANSLATION	protein_coding	-	-	-	234	0	0	0.5	0	3	-4,0	-	-	0	PRINCIPAL:1
ENSMUSG00000031298	Adgrg2	ENSMUST00000112401	ENSMUSP00000108020	TRANSLATION	protein_coding	-	CCDS41198.1	5	992	0	2.56	1.5	240.7	14	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031298	Adgrg2	ENSMUST00000146805	ENSMUSP00000118598	TRANSLATION	protein_coding	stop	-	5	105	0	0	0	0	3	-4,-6	-	-	-1	MINOR
ENSMUSG00000031298	Adgrg2	ENSMUST00000112402	ENSMUSP00000108021	TRANSLATION	protein_coding	-	CCDS41197.1	1	995	0	2.56	1.5	240.7	14	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031298	Adgrg2	ENSMUST00000112408	ENSMUSP00000108027	TRANSLATION	protein_coding	-	CCDS72459.1	1	1006	0	2.56	1.5	240.7	14	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000031298	Adgrg2	ENSMUST00000112400	ENSMUSP00000108019	TRANSLATION	protein_coding	-	CCDS41196.1	1	1009	0	2.56	1.5	240.7	14	-4,-6	-	-	12	PRINCIPAL:4
ENSMUSG00000031298	Adgrg2	ENSMUST00000112404	ENSMUSP00000108023	TRANSLATION	protein_coding	-	CCDS41199.1	1	982	0	2.56	1.5	240.7	14	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031298	Adgrg2	ENSMUST00000112405	ENSMUSP00000108024	TRANSLATION	protein_coding	-	CCDS81192.1	1	993	0	2.56	1.5	240.7	14	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031298	Adgrg2	ENSMUST00000123450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031298	Adgrg2	ENSMUST00000112398	ENSMUSP00000108017	TRANSLATION	protein_coding	-	-	1	955	0	2.56	0	240.7	14	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000095754	Spin2f	ENSMUST00000238350	ENSMUSP00000158704	TRANSLATION	protein_coding	stop	-	-	117	0	1	0	85.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095754	Spin2f	ENSMUST00000238209	ENSMUSP00000158768	TRANSLATION	protein_coding	-	-	-	236	0	2	0.5	218.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095754	Spin2f	ENSMUST00000177990	ENSMUSP00000137473	TRANSLATION	protein_coding	start	-	5	254	0	2	0	218.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051159	Cited1	ENSMUST00000134887	ENSMUSP00000117702	TRANSLATION	protein_coding	stop	-	5	118	0	0	0	24.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051159	Cited1	ENSMUST00000130589	ENSMUSP00000119123	TRANSLATION	protein_coding	stop	-	3	110	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051159	Cited1	ENSMUST00000136277	ENSMUSP00000114269	TRANSLATION	protein_coding	stop	-	5	61	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051159	Cited1	ENSMUST00000101336	ENSMUSP00000098890	TRANSLATION	protein_coding	-	CCDS30322.1	1	203	0	0.8	0.5	108.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000051159	Cited1	ENSMUST00000050551	ENSMUSP00000051789	TRANSLATION	protein_coding	-	CCDS30322.1	1	203	0	0.8	0.5	108.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031227	Magee1	ENSMUST00000033578	ENSMUSP00000094078	TRANSLATION	protein_coding	-	CCDS41094.1	-	918	0	0.2	0.5	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000016308	Ube2a	ENSMUST00000016452	ENSMUSP00000016452	TRANSLATION	protein_coding	-	CCDS30064.1	1	152	0	4.74	19.5	183.5	0	-4,-2	-	-	16	PRINCIPAL:3
ENSMUSG00000016308	Ube2a	ENSMUST00000201012	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016308	Ube2a	ENSMUST00000202783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016308	Ube2a	ENSMUST00000202991	ENSMUSP00000144242	TRANSLATION	protein_coding	-	CCDS85765.1	1	149	0	4.74	19.5	168.2	0	-4,-2	-	-	15.082	ALTERNATIVE:1
ENSMUSG00000016308	Ube2a	ENSMUST00000201117	ENSMUSP00000144372	TRANSLATION	protein_coding	stop	-	5	110	0	3.16	0	163.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000016308	Ube2a	ENSMUST00000201068	ENSMUSP00000143836	TRANSLATION	protein_coding	-	-	5	122	0	3.74	6.1	108	0	-4,-7	-	-	6.576	MINOR
ENSMUSG00000016308	Ube2a	ENSMUST00000202812	ENSMUSP00000144262	TRANSLATION	protein_coding	-	-	2	119	0	3.74	4.4	164.1	0	-4,-5	-	-	9.574	MINOR
ENSMUSG00000016308	Ube2a	ENSMUST00000201050	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016308	Ube2a	ENSMUST00000200835	ENSMUSP00000144306	TRANSLATION	protein_coding	-	-	5	84	0	2.66	0	91.9	0	-4,-2	-	-	2.346	MINOR
ENSMUSG00000049775	Tmsb4x	ENSMUST00000112176	ENSMUSP00000107798	TRANSLATION	protein_coding	-	-	1	50	0	1.33	0	81.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000049775	Tmsb4x	ENSMUST00000112175	ENSMUSP00000107797	TRANSLATION	protein_coding	-	-	2	50	0	1.33	0	81.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000049775	Tmsb4x	ENSMUST00000112172	ENSMUSP00000107795	TRANSLATION	protein_coding	-	CCDS30529.1	1	44	0	1.33	19.5	81.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000100133	Tgif2lx1	ENSMUST00000073857	ENSMUSP00000073522	TRANSLATION	protein_coding	-	CCDS30368.1	-	231	0	0.2	0.5	46.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072964	Bhlhb9	ENSMUST00000180025	ENSMUSP00000137213	TRANSLATION	protein_coding	-	CCDS30410.1	2	539	0	0	1.5	302	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000072964	Bhlhb9	ENSMUST00000148374	ENSMUSP00000121154	TRANSLATION	protein_coding	stop	-	2	95	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000072964	Bhlhb9	ENSMUST00000151989	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072964	Bhlhb9	ENSMUST00000068755	ENSMUSP00000068067	TRANSLATION	protein_coding	-	CCDS30410.1	1	539	0	0	1.5	302	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000072964	Bhlhb9	ENSMUST00000207433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044348	Slc25a53	ENSMUST00000113070	ENSMUSP00000108693	TRANSLATION	protein_coding	-	CCDS41140.1	5	346	0	0.36	0.5	63.5	0	-2,-4	-	-	9.858	MINOR
ENSMUSG00000044348	Slc25a53	ENSMUST00000171738	ENSMUSP00000132572	TRANSLATION	protein_coding	-	CCDS53198.1	2	306	0	0.36	7.5	63.5	0	-4,-5	-	-	12.858	PRINCIPAL:1
ENSMUSG00000044348	Slc25a53	ENSMUST00000129807	ENSMUSP00000118095	TRANSLATION	protein_coding	stop	-	5	185	0	0.36	0	29	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044348	Slc25a53	ENSMUST00000113069	ENSMUSP00000108692	TRANSLATION	protein_coding	-	CCDS41140.1	1	346	0	0.36	0.5	63.5	0	-2,-4	-	-	9.858	MINOR
ENSMUSG00000044348	Slc25a53	ENSMUST00000056674	ENSMUSP00000050337	TRANSLATION	protein_coding	stop	-	2	232	0	0.56	0	63.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000044348	Slc25a53	ENSMUST00000154484	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044348	Slc25a53	ENSMUST00000132171	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044348	Slc25a53	ENSMUST00000148253	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000136300	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000123516	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000125747	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000140615	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000145842	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044348	Slc25a53	ENSMUST00000125864	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031293	Rs1	ENSMUST00000150170	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031293	Rs1	ENSMUST00000112368	ENSMUSP00000107987	TRANSLATION	protein_coding	-	-	3	180	0	3.3	0	97.6	0	-4,-6	-	-	9.474	MINOR
ENSMUSG00000031293	Rs1	ENSMUST00000033650	ENSMUSP00000033650	TRANSLATION	protein_coding	-	CCDS30505.1	1	224	0	4.564	5.2	97.6	0	2,-3	-	-	14	PRINCIPAL:1
ENSMUSG00000031364	Grpr	ENSMUST00000033730	ENSMUSP00000033730	TRANSLATION	protein_coding	-	CCDS30512.1	1	384	0	2	6.3	177.6	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000031371	Haus7	ENSMUST00000131140	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031371	Haus7	ENSMUST00000077243	ENSMUSP00000076479	TRANSLATION	protein_coding	-	CCDS30203.1	1	248	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031371	Haus7	ENSMUST00000033737	ENSMUSP00000033737	TRANSLATION	protein_coding	-	CCDS30202.1	1	364	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:4
ENSMUSG00000079701	Ssxb3	ENSMUST00000089374	ENSMUSP00000086792	TRANSLATION	protein_coding	-	CCDS29999.1	1	170	0	0	0.5	81.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079701	Ssxb3	ENSMUST00000089379	ENSMUSP00000086797	TRANSLATION	protein_coding	-	CCDS29999.1	1	170	0	0	0.5	81.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071815	Fthl17e	ENSMUST00000096509	ENSMUSP00000094254	TRANSLATION	protein_coding	-	CCDS30003.1	-	176	0	1	1.5	92.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036109	Mbnl3	ENSMUST00000136404	ENSMUSP00000138520	TRANSLATION	protein_coding	-	-	5	332	16	3	2.2	45	0	-4,-5	-	-	18.452	MINOR
ENSMUSG00000036109	Mbnl3	ENSMUST00000156028	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036109	Mbnl3	ENSMUST00000114876	ENSMUSP00000110526	TRANSLATION	protein_coding	-	CCDS40969.1	1	342	16	3	6.3	45	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000036109	Mbnl3	ENSMUST00000148116	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036109	Mbnl3	ENSMUST00000041495	ENSMUSP00000046036	TRANSLATION	protein_coding	-	CCDS81126.1	1	246	8	1	0.5	31.3	0	-4,-7	-	-	6.84	MINOR
ENSMUSG00000036109	Mbnl3	ENSMUST00000150014	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036109	Mbnl3	ENSMUST00000114875	ENSMUSP00000110525	TRANSLATION	protein_coding	-	CCDS81126.1	1	246	8	1	0.5	31.3	0	-4,-7	-	-	6.84	MINOR
ENSMUSG00000006373	Pgrmc1	ENSMUST00000073339	ENSMUSP00000073061	TRANSLATION	protein_coding	-	CCDS30060.1	1	195	0	2.8	6.5	54.3	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000062184	Hs6st2	ENSMUST00000142738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062184	Hs6st2	ENSMUST00000142983	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062184	Hs6st2	ENSMUST00000114871	ENSMUSP00000110521	TRANSLATION	protein_coding	-	CCDS72379.1	1	612	0	2	0.5	255.5	1	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000062184	Hs6st2	ENSMUST00000140145	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000062184	Hs6st2	ENSMUST00000088172	ENSMUSP00000085497	TRANSLATION	protein_coding	-	CCDS40970.1	1	652	0	1.46	0.5	252.4	1	-4,-2	-	-	10.194	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000023854	ENSMUSP00000023854	TRANSLATION	protein_coding	-	CCDS30148.1	1	280	37	6.5	9.8	181.6	0	-4,-5	-	-	20.932	PRINCIPAL:3
ENSMUSG00000023092	Fhl1	ENSMUST00000114768	ENSMUSP00000110416	TRANSLATION	protein_coding	-	-	5	210	22	4	5.1	93.8	0	-4,-6	-	-	3.102	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000114772	ENSMUSP00000110420	TRANSLATION	protein_coding	-	CCDS40980.1	1	296	37	6.5	13	181.6	0	-4,-6	-	-	22	ALTERNATIVE:1
ENSMUSG00000023092	Fhl1	ENSMUST00000114773	ENSMUSP00000110421	TRANSLATION	protein_coding	-	-	5	309	37	6.5	2.4	181.6	0	0,-4	-	-	18.468	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000116596	ENSMUSP00000112295	TRANSLATION	protein_coding	-	CCDS30148.1	5	280	37	6.5	9.8	181.6	0	-4,-5	-	-	20.932	PRINCIPAL:3
ENSMUSG00000023092	Fhl1	ENSMUST00000114769	ENSMUSP00000110417	TRANSLATION	protein_coding	-	CCDS40981.1	1	323	31	5	7.5	140.8	0	-4,-5	-	-	10.718	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000151033	ENSMUSP00000119828	TRANSLATION	protein_coding	stop	-	3	89	12	2.25	0	47.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000144600	ENSMUSP00000116725	TRANSLATION	protein_coding	stop	-	3	234	31	5	0.5	140.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000155882	ENSMUSP00000115700	TRANSLATION	protein_coding	stop	-	3	72	11	1.75	0	28.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000023092	Fhl1	ENSMUST00000153401	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000047694	Yipf6	ENSMUST00000124010	ENSMUSP00000115199	TRANSLATION	protein_coding	stop	-	3	55	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000047694	Yipf6	ENSMUST00000113811	ENSMUSP00000109442	TRANSLATION	protein_coding	-	CCDS30296.1	1	236	0	0	5.1	66.1	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047694	Yipf6	ENSMUST00000151353	ENSMUSP00000117981	TRANSLATION	protein_coding	stop	-	5	198	0	0	0	65.9	5	-4,-5	-	-	-1	MINOR
ENSMUSG00000047694	Yipf6	ENSMUST00000054697	ENSMUSP00000056039	TRANSLATION	protein_coding	-	CCDS30296.1	1	236	0	0	5.1	66.1	7	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000047694	Yipf6	ENSMUST00000149082	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047694	Yipf6	ENSMUST00000140479	-	NO_TRANSLATION	retained_intron
ENSMUSG00000100249	Btbd35f23	ENSMUST00000189190	ENSMUSP00000140013	TRANSLATION	protein_coding	-	CCDS57720.1	-	498	0	0	0.5	40.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031385	Plxnb3	ENSMUST00000146812	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031385	Plxnb3	ENSMUST00000147127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031385	Plxnb3	ENSMUST00000002079	ENSMUSP00000002079	TRANSLATION	protein_coding	-	CCDS41013.1	5	1902	0	23.74	1.5	1032.7	0	-2,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000031385	Plxnb3	ENSMUST00000149478	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031385	Plxnb3	ENSMUST00000155096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044597	Mycs	ENSMUST00000058404	ENSMUSP00000054158	TRANSLATION	protein_coding	-	CCDS29953.1	-	431	0	0.2	0.5	432.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035387	4930415L06Rik	ENSMUST00000088146	ENSMUSP00000085471	TRANSLATION	protein_coding	-	CCDS53129.1	1	813	0	0	0.5	228.6	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079629	Rhox2g	ENSMUST00000183888	ENSMUSP00000139146	TRANSLATION	protein_coding	start	-	2	91	0	0.2	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079629	Rhox2g	ENSMUST00000115169	ENSMUSP00000110823	TRANSLATION	protein_coding	-	CCDS53059.1	1	191	0	1.2	0.5	45.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068122	Agtr2	ENSMUST00000089188	ENSMUSP00000086592	TRANSLATION	protein_coding	-	CCDS40889.1	1	363	0	1	5.1	185.4	0	-4,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000068122	Agtr2	ENSMUST00000131150	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046287	Pnma3	ENSMUST00000060418	ENSMUSP00000054177	TRANSLATION	protein_coding	-	CCDS30192.1	-	466	4	0	1.5	454	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000067873	Htatsf1	ENSMUST00000114751	ENSMUSP00000110399	TRANSLATION	protein_coding	-	-	1	195	0	1	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000067873	Htatsf1	ENSMUST00000134785	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067873	Htatsf1	ENSMUST00000088652	ENSMUSP00000086027	TRANSLATION	protein_coding	-	CCDS40983.1	1	757	0	4.2	0.5	56.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000062791	Gm382	ENSMUST00000096332	ENSMUSP00000094056	TRANSLATION	protein_coding	-	CCDS41114.1	1	1250	0	0	1.5	323.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031155	Pim2	ENSMUST00000126715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031155	Pim2	ENSMUST00000145177	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031155	Pim2	ENSMUST00000033495	ENSMUSP00000033495	TRANSLATION	protein_coding	start	-	1	376	18	5.1	0	189.6	0	-4,-2	-	-	-1	PRINCIPAL:1
ENSMUSG00000031131	Vgll1	ENSMUST00000114746	ENSMUSP00000110394	TRANSLATION	protein_coding	-	CCDS30151.1	1	307	0	1	0.5	64.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031131	Vgll1	ENSMUST00000033465	ENSMUSP00000033465	TRANSLATION	protein_coding	-	CCDS30151.1	1	307	0	1	0.5	64.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031131	Vgll1	ENSMUST00000114745	ENSMUSP00000110393	TRANSLATION	protein_coding	-	CCDS30151.1	1	307	0	1	0.5	64.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031131	Vgll1	ENSMUST00000141936	ENSMUSP00000114308	TRANSLATION	protein_coding	stop	-	2	150	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031326	Cdx4	ENSMUST00000033689	ENSMUSP00000033689	TRANSLATION	protein_coding	-	CCDS30328.1	1	282	0	1.4	2.9	225.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094273	Btbd35f17	ENSMUST00000105014	ENSMUSP00000100631	TRANSLATION	protein_coding	-	CCDS57725.1	-	498	0	0	0.5	41.1	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000057457	Phex	ENSMUST00000079945	ENSMUSP00000078863	TRANSLATION	protein_coding	-	CCDS30497.1	1	749	7	13.985	7.5	584.5	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000057457	Phex	ENSMUST00000135713	ENSMUSP00000121281	TRANSLATION	protein_coding	start	-	-	34	0	0.8	0	25.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057457	Phex	ENSMUST00000138396	ENSMUSP00000122953	TRANSLATION	protein_coding	stop	-	5	548	0	8.585	0	358.2	1	-4,-7	-	-	-1	MINOR
ENSMUSG00000040855	Reps2	ENSMUST00000155043	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040855	Reps2	ENSMUST00000101102	ENSMUSP00000098661	TRANSLATION	protein_coding	-	CCDS30508.1	1	648	4	3.87	3.9	0	0	-4,-5	-	-	11	PRINCIPAL:3
ENSMUSG00000040855	Reps2	ENSMUST00000112334	ENSMUSP00000107953	TRANSLATION	protein_coding	-	CCDS72462.1	1	647	4	3.87	3.9	0	0	-4,-5	-	-	11	ALTERNATIVE:2
ENSMUSG00000040855	Reps2	ENSMUST00000154424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040855	Reps2	ENSMUST00000155863	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046615	Actrt1	ENSMUST00000059466	ENSMUSP00000062570	TRANSLATION	protein_coding	-	CCDS30102.1	-	376	21	1	1.5	366.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000045802	Hsf3	ENSMUST00000119035	ENSMUSP00000114018	TRANSLATION	protein_coding	-	CCDS53140.1	1	311	0	1	0.5	26.7	0	-4,-5	-	-	3.246	MINOR
ENSMUSG00000045802	Hsf3	ENSMUST00000164693	ENSMUSP00000132248	TRANSLATION	protein_coding	-	CCDS85791.1	1	368	0	2	0.5	83.2	0	-4,-2	-	-	8.64	MINOR
ENSMUSG00000045802	Hsf3	ENSMUST00000146965	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045802	Hsf3	ENSMUST00000179832	ENSMUSP00000137314	TRANSLATION	protein_coding	-	CCDS53140.1	1	311	0	1	0.5	26.7	0	-4,-5	-	-	3.246	MINOR
ENSMUSG00000045802	Hsf3	ENSMUST00000059003	ENSMUSP00000052508	TRANSLATION	protein_coding	-	CCDS81156.1	1	492	0	3	1.5	105.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000042515	Pwwp3b	ENSMUST00000113042	ENSMUSP00000108665	TRANSLATION	protein_coding	-	CCDS30432.2	5	681	0	0.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042515	Pwwp3b	ENSMUST00000169886	ENSMUSP00000125759	TRANSLATION	protein_coding	stop	-	3	87	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042515	Pwwp3b	ENSMUST00000139359	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042515	Pwwp3b	ENSMUST00000166444	ENSMUSP00000126605	TRANSLATION	protein_coding	stop	-	5	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042515	Pwwp3b	ENSMUST00000170671	ENSMUSP00000129943	TRANSLATION	protein_coding	stop	-	5	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000042515	Pwwp3b	ENSMUST00000113045	ENSMUSP00000108668	TRANSLATION	protein_coding	-	CCDS30432.2	3	681	0	0.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042515	Pwwp3b	ENSMUST00000113043	ENSMUSP00000108666	TRANSLATION	protein_coding	-	CCDS30432.2	5	681	0	0.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000042515	Pwwp3b	ENSMUST00000113041	ENSMUSP00000108664	TRANSLATION	protein_coding	-	CCDS30432.2	5	681	0	0.2	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000002014	Ssr4	ENSMUST00000130738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002014	Ssr4	ENSMUST00000142829	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002014	Ssr4	ENSMUST00000155552	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002014	Ssr4	ENSMUST00000129239	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002014	Ssr4	ENSMUST00000136544	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002014	Ssr4	ENSMUST00000166518	ENSMUSP00000131386	TRANSLATION	protein_coding	-	CCDS53099.1	1	173	0	0	1.5	230.3	1	3,-2	-	-	6	ALTERNATIVE:2
ENSMUSG00000002014	Ssr4	ENSMUST00000002090	ENSMUSP00000002090	TRANSLATION	protein_coding	-	CCDS30213.1	1	172	0	0	1.5	227.9	1	2,-3	-	-	5.856	PRINCIPAL:3
ENSMUSG00000002014	Ssr4	ENSMUST00000141721	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015401	Cltrn	ENSMUST00000141818	ENSMUSP00000123629	TRANSLATION	protein_coding	stop	-	5	60	0	0	0	58.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000015401	Cltrn	ENSMUST00000015545	ENSMUSP00000015545	TRANSLATION	protein_coding	-	CCDS30517.1	1	222	0	0	5.1	222.4	1	3,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000015401	Cltrn	ENSMUST00000112280	ENSMUSP00000107899	TRANSLATION	protein_coding	-	CCDS30517.1	5	222	0	0	5.1	222.4	1	3,-3	-	-	8	PRINCIPAL:1
ENSMUSG00000050148	Ubqln2	ENSMUST00000060714	ENSMUSP00000056888	TRANSLATION	protein_coding	-	CCDS30482.1	-	638	0	0.4	0.5	94.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094577	Samt1b	ENSMUST00000179369	ENSMUSP00000136221	TRANSLATION	protein_coding	-	CCDS53228.1	5	237	0	0	0.5	0	3	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000094577	Samt1b	ENSMUST00000177994	ENSMUSP00000137533	TRANSLATION	protein_coding	-	CCDS53228.1	2	237	0	0	0.5	0	3	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000031093	Dock11	ENSMUST00000145757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031093	Dock11	ENSMUST00000140175	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031093	Dock11	ENSMUST00000115264	ENSMUSP00000110919	TRANSLATION	protein_coding	-	-	5	527	0	9.55	0	690.4	0	-4,-7	-	-	0	MINOR
ENSMUSG00000031093	Dock11	ENSMUST00000115266	ENSMUSP00000110921	TRANSLATION	protein_coding	-	-	5	1902	4	11.55	0	924.6	0	-4,-7	-	-	6.666	MINOR
ENSMUSG00000031093	Dock11	ENSMUST00000033419	ENSMUSP00000033419	TRANSLATION	protein_coding	-	CCDS40923.1	1	2073	9	12.55	6.3	1054.8	0	-4,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000056281	Olfr1322	ENSMUST00000217355	ENSMUSP00000150512	TRANSLATION	protein_coding	-	CCDS30118.1	5	310	0	0.36	1.5	174	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000056281	Olfr1322	ENSMUST00000070304	ENSMUSP00000065196	TRANSLATION	protein_coding	-	CCDS30118.1	-	310	0	0.36	1.5	174	6	-2,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031393	Mecp2	ENSMUST00000100750	ENSMUSP00000098314	TRANSLATION	protein_coding	-	CCDS41017.1	1	484	0	3.25	0.5	60.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031393	Mecp2	ENSMUST00000140399	ENSMUSP00000119947	TRANSLATION	protein_coding	-	-	5	189	0	1.5	0	53.1	0	-3,-5	-	-	7.776	MINOR
ENSMUSG00000031393	Mecp2	ENSMUST00000033770	ENSMUSP00000033770	TRANSLATION	protein_coding	-	CCDS41016.1	1	501	0	3.25	0.5	60.4	0	-3,-5	-	-	12	PRINCIPAL:4
ENSMUSG00000031393	Mecp2	ENSMUST00000170481	ENSMUSP00000127115	TRANSLATION	protein_coding	-	CCDS41017.1	5	484	0	3.25	0.5	60.4	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000031393	Mecp2	ENSMUST00000198358	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031393	Mecp2	ENSMUST00000123362	ENSMUSP00000118842	TRANSLATION	protein_coding	-	-	5	172	0	1.5	0	53.1	0	-4,-5	-	-	7.776	MINOR
ENSMUSG00000079531	Gm5936	ENSMUST00000114116	ENSMUSP00000109751	TRANSLATION	protein_coding	-	CCDS53112.1	3	728	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000079508	Apoo	ENSMUST00000113897	ENSMUSP00000109530	TRANSLATION	protein_coding	-	CCDS57769.1	1	212	0	0	0.5	134.9	2	-4,-7	-	-	6	MINOR
ENSMUSG00000079508	Apoo	ENSMUST00000113896	ENSMUSP00000109529	TRANSLATION	protein_coding	-	CCDS57770.1	1	164	0	0	1.5	134.9	2	-4,-5	-	-	6.231	MINOR
ENSMUSG00000079508	Apoo	ENSMUST00000113895	ENSMUSP00000109528	TRANSLATION	protein_coding	-	CCDS57770.1	1	164	0	0	1.5	134.9	2	-4,-5	-	-	6.231	MINOR
ENSMUSG00000079508	Apoo	ENSMUST00000113898	ENSMUSP00000109531	TRANSLATION	protein_coding	-	CCDS53136.1	3	198	0	0	7.5	134.9	2	-1,2	-	-	9	PRINCIPAL:1
ENSMUSG00000073177	Gm773	ENSMUST00000126937	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073177	Gm773	ENSMUST00000101561	ENSMUSP00000099097	TRANSLATION	protein_coding	-	CCDS30142.1	1	206	0	3.825	0.5	134	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000085139	A730046J19Rik	ENSMUST00000135687	ENSMUSP00000148011	TRANSLATION	protein_coding	-	-	1	89	0	0	6.8	48.9	0	-4,-7	-	-	8	PRINCIPAL:1
ENSMUSG00000045237	1110012L19Rik	ENSMUST00000053981	ENSMUSP00000052765	TRANSLATION	protein_coding	-	CCDS30174.1	1	157	0	0	4.1	22.5	0	-4,-2	-	-	7	PRINCIPAL:1
ENSMUSG00000068048	Rhox9	ENSMUST00000089062	ENSMUSP00000086462	TRANSLATION	protein_coding	-	CCDS30083.1	1	227	0	1.2	0.5	57.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000068048	Rhox9	ENSMUST00000170643	ENSMUSP00000126022	TRANSLATION	protein_coding	-	-	1	181	0	0	0	24.3	0	-4,-5	-	-	2.532	MINOR
ENSMUSG00000079703	Ssxb8	ENSMUST00000185125	ENSMUSP00000139040	TRANSLATION	protein_coding	-	CCDS40848.1	5	170	0	0	0.5	83.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079703	Ssxb8	ENSMUST00000101690	ENSMUSP00000099213	TRANSLATION	protein_coding	-	CCDS40848.1	5	170	0	0	0.5	83.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000071816	Ssxb5	ENSMUST00000089370	ENSMUSP00000086787	TRANSLATION	protein_coding	-	CCDS30001.1	1	159	0	0	0.5	80.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095698	Rhox2d	ENSMUST00000115179	ENSMUSP00000110833	TRANSLATION	protein_coding	-	CCDS40934.1	5	191	0	1	0.5	47.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067878	Map7d3	ENSMUST00000135542	ENSMUSP00000115069	TRANSLATION	protein_coding	stop	-	1	489	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000067878	Map7d3	ENSMUST00000114766	ENSMUSP00000110414	TRANSLATION	protein_coding	-	CCDS40982.1	1	876	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000042282	Gucy2f	ENSMUST00000042530	ENSMUSP00000044521	TRANSLATION	protein_coding	-	CCDS30446.1	1	1108	3	7.26	1.5	553.5	0	1,2	-	-	15	PRINCIPAL:1
ENSMUSG00000031351	Zfp185	ENSMUST00000164800	ENSMUSP00000126066	TRANSLATION	protein_coding	-	CCDS30191.2	1	486	8	0	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000031351	Zfp185	ENSMUST00000114546	ENSMUSP00000110193	TRANSLATION	protein_coding	-	CCDS53091.1	1	485	8	0	0.5	0	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031351	Zfp185	ENSMUST00000134588	ENSMUSP00000115266	TRANSLATION	protein_coding	stop	-	3	52	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035847	Ids	ENSMUST00000101509	ENSMUSP00000099046	TRANSLATION	protein_coding	-	CCDS40996.1	1	552	5	8.73	0.5	185.2	0	0,-3	-	-	17	PRINCIPAL:1
ENSMUSG00000035847	Ids	ENSMUST00000130519	ENSMUSP00000118732	TRANSLATION	protein_coding	start/stop	-	5	236	2	3.95	0	74.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062393	Dgkk	ENSMUST00000067410	ENSMUSP00000067591	TRANSLATION	protein_coding	-	CCDS85745.1	1	1118	10	1.4	0.5	347.2	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000062393	Dgkk	ENSMUST00000145302	ENSMUSP00000123079	TRANSLATION	protein_coding	start	-	1	1062	10	1.4	0	347.2	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000095716	Btbd35f10	ENSMUST00000178621	ENSMUSP00000136228	TRANSLATION	protein_coding	-	CCDS52973.1	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031304	Il2rg	ENSMUST00000127538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031304	Il2rg	ENSMUST00000135038	ENSMUSP00000123318	TRANSLATION	protein_coding	start	-	2	153	0	3	0	35.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031304	Il2rg	ENSMUST00000033664	ENSMUSP00000033664	TRANSLATION	protein_coding	-	CCDS30312.1	1	369	0	5.988	1.5	77	0	3,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000031304	Il2rg	ENSMUST00000145074	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071748	Gm14698	ENSMUST00000096420	ENSMUSP00000094153	TRANSLATION	protein_coding	-	-	-	223	9	1	15	130.7	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000048573	Cypt3	ENSMUST00000056754	ENSMUSP00000057687	TRANSLATION	protein_coding	-	CCDS30483.1	1	171	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:3
ENSMUSG00000048573	Cypt3	ENSMUST00000112573	ENSMUSP00000108192	TRANSLATION	protein_coding	-	CCDS81188.1	1	174	0	0	0.5	0	0	-4,-2	-	-	0	ALTERNATIVE:2
ENSMUSG00000019359	Gdpd2	ENSMUST00000113744	ENSMUSP00000109373	TRANSLATION	protein_coding	-	CCDS30306.1	1	539	5	2.75	7.5	81.2	6	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000019359	Gdpd2	ENSMUST00000144912	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019359	Gdpd2	ENSMUST00000151572	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019359	Gdpd2	ENSMUST00000019503	ENSMUSP00000019503	TRANSLATION	protein_coding	-	CCDS30306.1	1	539	5	2.75	7.5	81.2	6	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000019359	Gdpd2	ENSMUST00000156336	-	NO_TRANSLATION	retained_intron
ENSMUSG00000055555	Ct55	ENSMUST00000069209	ENSMUSP00000064619	TRANSLATION	protein_coding	-	CCDS30136.1	1	236	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000094860	Btbd35f27	ENSMUST00000178143	ENSMUSP00000137066	TRANSLATION	protein_coding	-	CCDS57726.1	-	498	0	0	0.5	36.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031245	Hmgn5	ENSMUST00000033597	ENSMUSP00000033597	TRANSLATION	protein_coding	-	CCDS41101.1	1	406	0	0	0.5	76.3	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000035395	Dcaf8l	ENSMUST00000113960	ENSMUSP00000109593	TRANSLATION	protein_coding	-	CCDS30263.1	1	747	0	0.16	0.5	56.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035395	Dcaf8l	ENSMUST00000113959	ENSMUSP00000109592	TRANSLATION	protein_coding	-	CCDS30263.1	5	747	0	0.16	0.5	56.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025051	Samt4	ENSMUST00000026029	ENSMUSP00000026029	TRANSLATION	protein_coding	-	CCDS30486.1	1	233	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000034160	Ogt	ENSMUST00000044475	ENSMUSP00000045409	TRANSLATION	protein_coding	-	CCDS30318.1	1	1046	2	20.566	16.2	1087.3	0	-4,-6	-	-	17.684	PRINCIPAL:3
ENSMUSG00000034160	Ogt	ENSMUST00000155713	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034160	Ogt	ENSMUST00000147635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034160	Ogt	ENSMUST00000150161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034160	Ogt	ENSMUST00000155792	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034160	Ogt	ENSMUST00000153979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034160	Ogt	ENSMUST00000119299	ENSMUSP00000113454	TRANSLATION	protein_coding	-	CCDS72415.1	5	1036	2	20.5	17.5	1087.3	0	-4,-5	-	-	17.868	ALTERNATIVE:1
ENSMUSG00000031374	Zfp92	ENSMUST00000033740	ENSMUSP00000033740	TRANSLATION	protein_coding	-	CCDS30200.1	1	488	35	2.2	0.5	259	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031374	Zfp92	ENSMUST00000086470	ENSMUSP00000083661	TRANSLATION	protein_coding	-	CCDS81135.1	1	375	27	1.8	0.5	220.5	0	-4,-6	-	-	9.264	MINOR
ENSMUSG00000060685	Fthl17c	ENSMUST00000075792	ENSMUSP00000075195	TRANSLATION	protein_coding	-	CCDS52994.1	-	176	0	1	1.5	95.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000023257	Cypt1	ENSMUST00000024026	ENSMUSP00000024026	TRANSLATION	protein_coding	-	CCDS40880.1	1	173	0	0	0.5	0	0	-2,-5	-	-	0	PRINCIPAL:3
ENSMUSG00000023257	Cypt1	ENSMUST00000115422	ENSMUSP00000111082	TRANSLATION	protein_coding	-	CCDS81101.1	1	168	0	0	0.5	0	0	-2,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000031271	Serpina7	ENSMUST00000060824	ENSMUSP00000056166	TRANSLATION	protein_coding	-	-	1	287	0	4.4	0	232.7	0	-4,-7	-	-	2.802	MINOR
ENSMUSG00000031271	Serpina7	ENSMUST00000033626	ENSMUSP00000033626	TRANSLATION	protein_coding	-	CCDS53200.1	1	426	0	6	1.5	354.5	0	2,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031271	Serpina7	ENSMUST00000152457	ENSMUSP00000120672	TRANSLATION	protein_coding	stop	-	2	72	0	1	0	0	0	3,-2	-	-	-1	MINOR
ENSMUSG00000072479	Xlr5b	ENSMUST00000097221	ENSMUSP00000110163	TRANSLATION	protein_coding	-	CCDS53095.1	5	236	0	3.5	1.5	127	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072479	Xlr5b	ENSMUST00000114518	ENSMUSP00000110164	TRANSLATION	protein_coding	-	CCDS53095.1	1	236	0	3.5	1.5	127	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000072479	Xlr5b	ENSMUST00000135742	ENSMUSP00000120174	TRANSLATION	protein_coding	stop	-	5	198	0	2.5	0	119.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000080725	Gm6121	ENSMUST00000119231	ENSMUSP00000112771	TRANSLATION	protein_coding	-	CCDS53028.1	5	212	0	1.4	0.5	38.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000080725	Gm6121	ENSMUST00000167438	ENSMUSP00000133203	TRANSLATION	protein_coding	-	CCDS53028.1	5	212	0	1.4	0.5	38.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000049804	Armcx4	ENSMUST00000124226	ENSMUSP00000132914	TRANSLATION	protein_coding	-	CCDS57773.1	2	2356	0	0	0.5	288.5	0	-3,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000095934	Btbd35f13	ENSMUST00000177912	ENSMUSP00000136662	TRANSLATION	protein_coding	-	CCDS72358.1	-	498	0	0	0.5	40.4	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000071788	Gm14525	ENSMUST00000119649	ENSMUSP00000113334	TRANSLATION	protein_coding	-	CCDS53027.1	1	212	0	1.4	0.5	38.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031266	Gla	ENSMUST00000153024	ENSMUSP00000123098	TRANSLATION	protein_coding	stop	-	3	77	4	1.75	0	139.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031266	Gla	ENSMUST00000239113	ENSMUSP00000159121	TRANSLATION	protein_coding	-	CCDS41124.1	-	421	12	7.75	1.5	519.3	0	1,-2	-	-	18	PRINCIPAL:2
ENSMUSG00000031266	Gla	ENSMUST00000033621	ENSMUSP00000033621	TRANSLATION	protein_coding	-	-	1	419	12	7.75	1.5	519.3	0	1,-2	-	-	18	ALTERNATIVE:2
ENSMUSG00000095063	Slx	ENSMUST00000096913	ENSMUSP00000094676	TRANSLATION	protein_coding	-	CCDS53026.1	5	212	0	1.2	0.5	38.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000034607	Pof1b	ENSMUST00000039887	ENSMUSP00000047655	TRANSLATION	protein_coding	-	CCDS30362.1	1	587	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000057836	Xlr3a	ENSMUST00000074619	ENSMUSP00000074199	TRANSLATION	protein_coding	-	CCDS53092.1	1	221	0	3.38	0.5	111.2	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000057836	Xlr3a	ENSMUST00000173473	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000057836	Xlr3a	ENSMUST00000173742	ENSMUSP00000134475	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000057836	Xlr3a	ENSMUST00000174162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000057836	Xlr3a	ENSMUST00000114524	ENSMUSP00000110170	TRANSLATION	protein_coding	-	-	1	226	0	3.38	1.5	111.2	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000057836	Xlr3a	ENSMUST00000172938	ENSMUSP00000134647	TRANSLATION	nonsense_mediated_decay	start	-	3	33	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000057836	Xlr3a	ENSMUST00000172709	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031410	Nxf7	ENSMUST00000150900	ENSMUSP00000119764	TRANSLATION	protein_coding	stop	-	3	155	0	1.93	0	69.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031410	Nxf7	ENSMUST00000127202	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031410	Nxf7	ENSMUST00000113163	ENSMUSP00000108788	TRANSLATION	protein_coding	-	CCDS30406.1	1	620	0	14	0.5	241.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031410	Nxf7	ENSMUST00000141310	ENSMUSP00000117622	TRANSLATION	protein_coding	stop	-	3	127	0	0.93	0	21.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031410	Nxf7	ENSMUST00000137977	ENSMUSP00000122993	TRANSLATION	protein_coding	start	-	1	475	0	12.8	0	241.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031410	Nxf7	ENSMUST00000033784	ENSMUSP00000033784	TRANSLATION	protein_coding	-	CCDS30406.1	1	620	0	14	0.5	241.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079350	Magea8	ENSMUST00000070141	ENSMUSP00000066341	TRANSLATION	protein_coding	-	CCDS30490.1	1	320	0	0.8	1.5	27.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000067262	Vmn1r239-ps	ENSMUST00000127465	ENSMUSP00000158116	TRANSLATION	protein_coding	-	-	-	310	0	0	1.5	449.6	7	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000067262	Vmn1r239-ps	ENSMUST00000237076	ENSMUSP00000157986	TRANSLATION	protein_coding	-	-	-	311	0	0	1.5	449.6	7	-4,-7	-	-	6	PRINCIPAL:5
ENSMUSG00000036198	Arhgap36	ENSMUST00000114904	ENSMUSP00000110554	TRANSLATION	protein_coding	-	CCDS40963.1	1	590	0	3.17	0.5	129	0	-4,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000036198	Arhgap36	ENSMUST00000130558	ENSMUSP00000119757	TRANSLATION	protein_coding	stop	-	3	262	0	0.8	0	31.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000036198	Arhgap36	ENSMUST00000042444	ENSMUSP00000040798	TRANSLATION	protein_coding	-	-	5	533	0	3.17	0	129	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000036198	Arhgap36	ENSMUST00000132784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036198	Arhgap36	ENSMUST00000151128	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031425	Plp1	ENSMUST00000144880	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031425	Plp1	ENSMUST00000113085	ENSMUSP00000108708	TRANSLATION	protein_coding	-	CCDS72436.1	1	242	0	0	11.6	349.1	4	-3,-6	-	-	9.072	ALTERNATIVE:1
ENSMUSG00000031425	Plp1	ENSMUST00000125644	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031425	Plp1	ENSMUST00000033800	ENSMUSP00000033800	TRANSLATION	protein_coding	-	CCDS30424.1	1	277	0	0	14.8	340.5	3	-3,-6	-	-	9.484	PRINCIPAL:3
ENSMUSG00000031079	Zfp300	ENSMUST00000154299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031079	Zfp300	ENSMUST00000139060	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031079	Zfp300	ENSMUST00000040667	ENSMUSP00000046514	TRANSLATION	protein_coding	-	CCDS30050.1	1	645	52	1.4	0.5	362.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000073027	Dmrtc1b	ENSMUST00000118842	ENSMUSP00000113730	TRANSLATION	protein_coding	-	-	1	202	0	0	0	158.1	0	-4,-6	-	-	6	ALTERNATIVE:2
ENSMUSG00000073027	Dmrtc1b	ENSMUST00000113609	ENSMUSP00000109239	TRANSLATION	protein_coding	-	CCDS81160.1	1	267	0	0	0.5	158.1	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000073027	Dmrtc1b	ENSMUST00000101324	ENSMUSP00000098880	TRANSLATION	protein_coding	-	CCDS30325.1	1	241	0	0	0.5	158.1	0	-4,-6	-	-	6	PRINCIPAL:3
ENSMUSG00000054667	Irs4	ENSMUST00000067841	ENSMUSP00000067085	TRANSLATION	protein_coding	-	CCDS30445.1	1	1216	0	0.2	0.5	99.9	0	-2,2	-	-	12	PRINCIPAL:1
ENSMUSG00000054453	Sytl5	ENSMUST00000067529	ENSMUSP00000064826	TRANSLATION	protein_coding	-	CCDS40860.1	1	753	12	6.6	2.7	202	0	-4,-5	-	-	18.586	PRINCIPAL:3
ENSMUSG00000054453	Sytl5	ENSMUST00000086165	ENSMUSP00000083339	TRANSLATION	protein_coding	-	CCDS72342.1	1	731	12	6.6	3.9	202	0	-4,-5	-	-	19	ALTERNATIVE:2
ENSMUSG00000025268	Maged2	ENSMUST00000026302	ENSMUSP00000026302	TRANSLATION	protein_coding	-	CCDS30466.1	5	616	0	5.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025268	Maged2	ENSMUST00000145342	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025268	Maged2	ENSMUST00000131241	ENSMUSP00000120903	TRANSLATION	protein_coding	stop	-	2	161	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025268	Maged2	ENSMUST00000147152	ENSMUSP00000116332	TRANSLATION	protein_coding	stop	-	5	213	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025268	Maged2	ENSMUST00000129768	ENSMUSP00000115770	TRANSLATION	protein_coding	stop	-	5	194	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025268	Maged2	ENSMUST00000124537	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025268	Maged2	ENSMUST00000112697	ENSMUSP00000108317	TRANSLATION	protein_coding	-	CCDS30466.1	1	616	0	5.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025268	Maged2	ENSMUST00000143843	ENSMUSP00000119088	TRANSLATION	protein_coding	stop	-	3	276	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025268	Maged2	ENSMUST00000112700	ENSMUSP00000108320	TRANSLATION	protein_coding	-	CCDS30466.1	1	616	0	5.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025268	Maged2	ENSMUST00000112699	ENSMUSP00000108319	TRANSLATION	protein_coding	-	CCDS30466.1	1	616	0	5.35	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064016	Gm648	ENSMUST00000081133	ENSMUSP00000079908	TRANSLATION	protein_coding	-	CCDS53075.1	1	213	0	0	1.5	95.6	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095655	H2al1f	ENSMUST00000179004	ENSMUSP00000136695	TRANSLATION	protein_coding	-	CCDS57732.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031202	Rab39b	ENSMUST00000033545	ENSMUSP00000033545	TRANSLATION	protein_coding	-	CCDS30242.1	1	213	20	1.8	13.3	199.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000040138	Ndp	ENSMUST00000040134	ENSMUSP00000046692	TRANSLATION	protein_coding	-	CCDS30034.1	1	131	0	1.8	15	28.4	0	0,-3	-	-	16	PRINCIPAL:1
ENSMUSG00000090132	Cypt2	ENSMUST00000041758	ENSMUSP00000132007	TRANSLATION	protein_coding	-	CCDS30335.1	1	180	0	0	0.5	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000031162	Gata1	ENSMUST00000125418	ENSMUSP00000118052	TRANSLATION	protein_coding	stop	-	3	109	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031162	Gata1	ENSMUST00000033502	ENSMUSP00000033502	TRANSLATION	protein_coding	-	CCDS29981.1	1	413	8	2.6	3.9	106.1	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000031162	Gata1	ENSMUST00000128449	ENSMUSP00000123620	TRANSLATION	protein_coding	stop	-	3	124	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037217	Syn1	ENSMUST00000081893	ENSMUSP00000080568	TRANSLATION	protein_coding	-	CCDS53017.1	5	706	22	9	6.3	623	0	-4,-2	-	-	20	ALTERNATIVE:1
ENSMUSG00000037217	Syn1	ENSMUST00000115345	ENSMUSP00000111002	TRANSLATION	protein_coding	-	CCDS53018.1	1	670	22	9	6.3	623	0	-4,-2	-	-	20	PRINCIPAL:3
ENSMUSG00000035062	Zc4h2	ENSMUST00000119640	ENSMUSP00000113689	TRANSLATION	protein_coding	-	CCDS81153.1	1	217	2	0	0.5	236.5	0	-4,-5	-	-	6.344	MINOR
ENSMUSG00000035062	Zc4h2	ENSMUST00000044382	ENSMUSP00000041236	TRANSLATION	protein_coding	-	CCDS30284.1	1	224	2	0	20.3	264.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035062	Zc4h2	ENSMUST00000120620	ENSMUSP00000112449	TRANSLATION	protein_coding	-	CCDS81154.1	1	196	0	0	0.5	145	0	-4,-5	-	-	0	MINOR
ENSMUSG00000090084	Srpx	ENSMUST00000044789	ENSMUSP00000047926	TRANSLATION	protein_coding	-	CCDS30013.1	1	464	0	2.66	1.5	299.2	0	2,-1	-	-	12	PRINCIPAL:2
ENSMUSG00000090084	Srpx	ENSMUST00000115543	ENSMUSP00000111205	TRANSLATION	protein_coding	-	-	1	380	0	2.1	0	273.9	0	2,-2	-	-	9.216	MINOR
ENSMUSG00000090084	Srpx	ENSMUST00000147334	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090084	Srpx	ENSMUST00000115544	ENSMUSP00000111206	TRANSLATION	protein_coding	-	-	1	444	0	2.66	1	299.2	0	3,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000122022	ENSMUSP00000112529	TRANSLATION	protein_coding	-	-	5	1241	3	0	1.5	642.2	0	-4,-1	-	-	8.982	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000043596	ENSMUSP00000042778	TRANSLATION	protein_coding	-	CCDS30324.1	1	1182	3	0	1.5	642.5	0	-4,-1	-	-	9	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000113611	ENSMUSP00000109241	TRANSLATION	protein_coding	-	-	5	1224	3	0	0	642.2	0	-4,-1	-	-	8.982	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000119229	ENSMUSP00000114066	TRANSLATION	protein_coding	-	-	5	1211	3	0	0	642.2	0	-4,-1	-	-	8.982	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000142534	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034055	Phka1	ENSMUST00000120270	ENSMUSP00000113302	TRANSLATION	protein_coding	-	-	5	1224	3	0	1	642.2	0	-4,-1	-	-	8.982	ALTERNATIVE:2
ENSMUSG00000034055	Phka1	ENSMUST00000052012	ENSMUSP00000061991	TRANSLATION	protein_coding	-	CCDS30323.1	1	1241	3	0	1.5	642.2	0	-4,-1	-	-	8.982	PRINCIPAL:4
ENSMUSG00000035232	Pdk3	ENSMUST00000045748	ENSMUSP00000036604	TRANSLATION	protein_coding	-	CCDS30275.1	1	415	26	10.25	8.8	219.5	0	-4,0	-	-	21	PRINCIPAL:1
ENSMUSG00000035232	Pdk3	ENSMUST00000134502	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035232	Pdk3	ENSMUST00000154717	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031375	Bgn	ENSMUST00000141945	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031375	Bgn	ENSMUST00000183174	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031375	Bgn	ENSMUST00000033741	ENSMUSP00000033741	TRANSLATION	protein_coding	-	CCDS30204.1	1	369	0	7	5.1	160.5	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031375	Bgn	ENSMUST00000169489	ENSMUSP00000126768	TRANSLATION	protein_coding	-	CCDS30204.1	2	369	0	7	5.1	160.5	0	3,-2	-	-	14	PRINCIPAL:1
ENSMUSG00000031375	Bgn	ENSMUST00000130873	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031375	Bgn	ENSMUST00000133394	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031375	Bgn	ENSMUST00000155231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031375	Bgn	ENSMUST00000140803	-	NO_TRANSLATION	retained_intron
ENSMUSG00000015217	Hmgb3	ENSMUST00000114582	ENSMUSP00000110229	TRANSLATION	protein_coding	-	CCDS30180.1	1	200	0	3.6	1.5	202.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015217	Hmgb3	ENSMUST00000123100	ENSMUSP00000116937	TRANSLATION	protein_coding	stop	-	5	159	0	3	0	194.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000015217	Hmgb3	ENSMUST00000072699	ENSMUSP00000110232	TRANSLATION	protein_coding	-	CCDS30180.1	1	200	0	3.6	1.5	202.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015217	Hmgb3	ENSMUST00000015361	ENSMUSP00000015361	TRANSLATION	protein_coding	-	CCDS30180.1	1	200	0	3.6	1.5	202.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015217	Hmgb3	ENSMUST00000088874	ENSMUSP00000086260	TRANSLATION	protein_coding	-	CCDS30180.1	2	200	0	3.6	1.5	202.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000015217	Hmgb3	ENSMUST00000132145	-	NO_TRANSLATION	retained_intron
ENSMUSG00000081044	AU015836	ENSMUST00000124180	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000081044	AU015836	ENSMUST00000163458	ENSMUSP00000130711	TRANSLATION	protein_coding	-	-	5	263	0	1	0	27.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000081044	AU015836	ENSMUST00000120624	ENSMUSP00000112921	TRANSLATION	protein_coding	-	-	3	112	0	0	0	0	0	-4,-6	-	-	0	MINOR
ENSMUSG00000081044	AU015836	ENSMUST00000149545	ENSMUSP00000121062	TRANSLATION	nonsense_mediated_decay	-	-	5	102	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000081044	AU015836	ENSMUST00000121565	ENSMUSP00000112835	TRANSLATION	protein_coding	-	-	1	102	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000054293	P2ry10b	ENSMUST00000147521	ENSMUSP00000118187	TRANSLATION	protein_coding	stop	-	2	122	0	1.8	0	57.7	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000054293	P2ry10b	ENSMUST00000167673	ENSMUSP00000133122	TRANSLATION	protein_coding	-	CCDS41099.1	2	352	0	2.464	1.5	119	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054293	P2ry10b	ENSMUST00000067249	ENSMUSP00000065588	TRANSLATION	protein_coding	-	CCDS41099.1	1	352	0	2.464	1.5	119	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054293	P2ry10b	ENSMUST00000180182	ENSMUSP00000136348	TRANSLATION	protein_coding	-	CCDS41099.1	2	352	0	2.464	1.5	119	11	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054293	P2ry10b	ENSMUST00000125676	ENSMUSP00000122347	TRANSLATION	protein_coding	stop	-	2	130	0	2.064	0	63.2	8	-4,-7	-	-	-1	MINOR
ENSMUSG00000054293	P2ry10b	ENSMUST00000137107	ENSMUSP00000122348	TRANSLATION	protein_coding	stop	-	3	37	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031133	Arhgef6	ENSMUST00000114735	ENSMUSP00000110383	TRANSLATION	protein_coding	-	-	1	483	0	9.83	0	374.9	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031133	Arhgef6	ENSMUST00000135098	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031133	Arhgef6	ENSMUST00000175636	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031133	Arhgef6	ENSMUST00000151768	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031133	Arhgef6	ENSMUST00000176986	ENSMUSP00000134851	TRANSLATION	protein_coding	stop	-	5	302	0	7.1	0	171.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031133	Arhgef6	ENSMUST00000033468	ENSMUSP00000033468	TRANSLATION	protein_coding	-	CCDS40984.2	1	795	0	14.13	0.5	641	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031133	Arhgef6	ENSMUST00000175900	ENSMUSP00000135475	TRANSLATION	protein_coding	start/stop	-	5	250	0	4.53	0	167.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031133	Arhgef6	ENSMUST00000134028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035427	Mageb4	ENSMUST00000113969	ENSMUSP00000109602	TRANSLATION	protein_coding	-	CCDS30261.1	1	556	0	0.4	0.5	60.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000035427	Mageb4	ENSMUST00000096378	ENSMUSP00000094107	TRANSLATION	protein_coding	-	CCDS30261.1	1	556	0	0.4	0.5	60.9	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000083695	Rnf138rt1	ENSMUST00000059320	ENSMUSP00000139291	TRANSLATION	protein_coding	-	CCDS72464.1	-	248	12	0.3	1.5	97.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031349	Nsdhl	ENSMUST00000033715	ENSMUSP00000033715	TRANSLATION	protein_coding	-	CCDS30190.1	1	362	26	3.86	2.7	210.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031349	Nsdhl	ENSMUST00000155663	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025626	Phf6	ENSMUST00000177780	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025626	Phf6	ENSMUST00000154864	ENSMUSP00000130358	TRANSLATION	protein_coding	-	CCDS72380.1	1	284	15	3.6	1.5	101.4	0	-4,-5	-	-	16.581	MINOR
ENSMUSG00000025626	Phf6	ENSMUST00000078944	ENSMUSP00000077971	TRANSLATION	protein_coding	-	CCDS30127.1	1	364	15	3.6	7.5	128.9	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025626	Phf6	ENSMUST00000179014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025626	Phf6	ENSMUST00000101587	ENSMUSP00000110497	TRANSLATION	protein_coding	-	-	2	323	13	3	0	118.7	0	-4,-5	-	-	14.856	MINOR
ENSMUSG00000094196	Magea3	ENSMUST00000079867	ENSMUSP00000078793	TRANSLATION	protein_coding	-	CCDS30489.1	-	320	0	0.8	1.5	26.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000089996	Tmsb15b2	ENSMUST00000069803	ENSMUSP00000063549	TRANSLATION	protein_coding	-	CCDS41138.1	2	45	0	1.33	19.5	71	0	-4,-5	-	-	11.128	PRINCIPAL:1
ENSMUSG00000089996	Tmsb15b2	ENSMUST00000180194	ENSMUSP00000137225	TRANSLATION	protein_coding	-	CCDS53197.1	3	80	0	1.93	0.5	121.1	0	-4,-5	-	-	12	MINOR
ENSMUSG00000031146	Plp2	ENSMUST00000033486	ENSMUSP00000033486	TRANSLATION	protein_coding	-	CCDS40842.1	1	152	0	0	5.1	45.5	0	-4,-6	-	-	8	PRINCIPAL:1
ENSMUSG00000031146	Plp2	ENSMUST00000143854	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031146	Plp2	ENSMUST00000136155	-	NO_TRANSLATION	retained_intron
ENSMUSG00000073247	Gm10486	ENSMUST00000101647	ENSMUSP00000099170	TRANSLATION	protein_coding	-	CCDS40921.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000004221	Ikbkg	ENSMUST00000132749	ENSMUSP00000115706	TRANSLATION	protein_coding	stop	-	5	16	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000156707	ENSMUSP00000116230	TRANSLATION	protein_coding	stop	-	3	190	0	4.5	0	88.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000139036	-	NO_TRANSLATION	retained_intron
ENSMUSG00000004221	Ikbkg	ENSMUST00000138564	ENSMUSP00000118884	TRANSLATION	protein_coding	stop	-	5	141	0	2	0	101.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000114133	ENSMUSP00000109768	TRANSLATION	protein_coding	-	CCDS41023.1	1	412	4	8.25	2.7	200.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000004330	ENSMUSP00000004330	TRANSLATION	protein_coding	-	CCDS53108.1	1	430	3	8.25	1.5	200.3	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000114129	ENSMUSP00000109764	TRANSLATION	protein_coding	-	CCDS30233.1	1	411	3	8.25	2.7	200.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000004221	Ikbkg	ENSMUST00000144947	ENSMUSP00000115829	TRANSLATION	protein_coding	stop	-	2	126	0	2	0	101.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000114128	ENSMUSP00000109763	TRANSLATION	protein_coding	-	CCDS41023.1	2	412	4	8.25	2.7	200.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000114127	ENSMUSP00000109762	TRANSLATION	protein_coding	-	CCDS41023.1	1	412	4	8.25	2.7	200.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000135165	ENSMUSP00000116615	TRANSLATION	protein_coding	stop	-	5	249	0	4.75	0	101.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000114130	ENSMUSP00000109765	TRANSLATION	protein_coding	-	CCDS53109.1	5	424	3	8.25	0.5	200.3	0	-4,-5	-	-	15	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000143784	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000004221	Ikbkg	ENSMUST00000149525	ENSMUSP00000120080	TRANSLATION	protein_coding	stop	-	1	265	0	4.75	0	101.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000130802	ENSMUSP00000116875	TRANSLATION	protein_coding	stop	-	5	228	0	4	0	101.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000004221	Ikbkg	ENSMUST00000064407	ENSMUSP00000064017	TRANSLATION	protein_coding	-	CCDS30233.1	1	411	3	8.25	2.7	200.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000004221	Ikbkg	ENSMUST00000164101	ENSMUSP00000126770	TRANSLATION	protein_coding	-	CCDS41023.1	5	412	4	8.25	2.7	200.3	0	-4,-5	-	-	16	ALTERNATIVE:2
ENSMUSG00000004221	Ikbkg	ENSMUST00000180230	ENSMUSP00000136573	TRANSLATION	protein_coding	-	CCDS30233.1	5	411	3	8.25	2.7	200.3	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000031429	Psmd10	ENSMUST00000112978	ENSMUSP00000108602	TRANSLATION	protein_coding	-	CCDS53207.1	2	151	0	4	6.5	96.6	0	-4,-5	-	-	8.696	MINOR
ENSMUSG00000031429	Psmd10	ENSMUST00000033805	ENSMUSP00000033805	TRANSLATION	protein_coding	-	CCDS30444.1	1	231	0	5.75	1.5	126.7	0	-4,-5	-	-	12.182	PRINCIPAL:1
ENSMUSG00000071767	Rhox7a	ENSMUST00000184891	ENSMUSP00000138811	TRANSLATION	nonsense_mediated_decay	start	-	5	22	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071767	Rhox7a	ENSMUST00000096454	ENSMUSP00000094193	TRANSLATION	protein_coding	-	CCDS30081.1	1	281	0	3.1	0.5	82	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031323	Dmrtc1a	ENSMUST00000033686	ENSMUSP00000033686	TRANSLATION	protein_coding	-	CCDS30327.1	1	201	0	0	0.5	95.6	0	-4,-7	-	-	3.186	MINOR
ENSMUSG00000031323	Dmrtc1a	ENSMUST00000120808	ENSMUSP00000112572	TRANSLATION	protein_coding	-	CCDS53162.1	1	156	0	0	0.5	95.6	0	-4,-5	-	-	3.186	MINOR
ENSMUSG00000031323	Dmrtc1a	ENSMUST00000119624	ENSMUSP00000112458	TRANSLATION	protein_coding	-	-	5	225	0	0	1.5	142	0	-4,-7	-	-	5.97	ALTERNATIVE:2
ENSMUSG00000031323	Dmrtc1a	ENSMUST00000121197	ENSMUSP00000113569	TRANSLATION	protein_coding	-	CCDS53161.1	1	182	0	0	0.5	142.5	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000059626	Rhox3e	ENSMUST00000115198	ENSMUSP00000110852	TRANSLATION	protein_coding	-	CCDS53056.1	1	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000059626	Rhox3e	ENSMUST00000184270	ENSMUSP00000139192	TRANSLATION	protein_coding	start	-	1	187	0	0.6	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059626	Rhox3e	ENSMUST00000184210	ENSMUSP00000139092	TRANSLATION	protein_coding	start	-	5	93	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059626	Rhox3e	ENSMUST00000081327	ENSMUSP00000080075	TRANSLATION	protein_coding	-	CCDS53056.1	5	215	0	1.6	0.5	42.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000073245	Gm14819	ENSMUST00000101645	ENSMUSP00000099168	TRANSLATION	protein_coding	-	CCDS53049.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073245	Gm14819	ENSMUST00000169396	ENSMUSP00000137268	TRANSLATION	protein_coding	-	CCDS53049.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031433	Rbm41	ENSMUST00000135126	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031433	Rbm41	ENSMUST00000087400	ENSMUSP00000084662	TRANSLATION	protein_coding	-	CCDS53205.1	1	404	0	1.3	0.5	0	0	-4,-5	-	-	3.546	MINOR
ENSMUSG00000031433	Rbm41	ENSMUST00000033810	ENSMUSP00000033810	TRANSLATION	protein_coding	-	CCDS41147.1	1	413	0	2.2	6.3	33.1	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000031433	Rbm41	ENSMUST00000148703	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031433	Rbm41	ENSMUST00000113007	ENSMUSP00000108631	TRANSLATION	protein_coding	-	CCDS53204.1	1	425	0	2.2	0.5	33.1	0	-3,-6	-	-	12	MINOR
ENSMUSG00000031433	Rbm41	ENSMUST00000113011	ENSMUSP00000108634	TRANSLATION	protein_coding	-	CCDS72439.1	1	437	0	2.2	4.1	33.1	0	-4,-5	-	-	13.17	ALTERNATIVE:2
ENSMUSG00000031433	Rbm41	ENSMUST00000138635	-	NO_TRANSLATION	retained_intron
ENSMUSG00000118554	AL646049.1	ENSMUST00000239046	ENSMUSP00000158935	TRANSLATION	protein_coding	-	-	-	368	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031360	Ctps2	ENSMUST00000123089	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000151424	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000112303	ENSMUSP00000107922	TRANSLATION	protein_coding	-	CCDS41202.1	1	586	30	14.25	7.5	622.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000031360	Ctps2	ENSMUST00000135094	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000033727	ENSMUSP00000033727	TRANSLATION	protein_coding	-	CCDS41202.1	1	586	30	14.25	7.5	622.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000031360	Ctps2	ENSMUST00000112301	ENSMUSP00000107920	TRANSLATION	protein_coding	-	CCDS41202.1	1	586	30	14.25	7.5	622.2	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000031360	Ctps2	ENSMUST00000148199	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000148949	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000142927	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000112302	ENSMUSP00000107921	TRANSLATION	protein_coding	-	CCDS53240.1	1	535	28	12.75	0.5	560.6	0	-4,-6	-	-	9.972	MINOR
ENSMUSG00000031360	Ctps2	ENSMUST00000126956	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031360	Ctps2	ENSMUST00000101095	ENSMUSP00000098656	TRANSLATION	protein_coding	-	-	1	521	26	11.978	0	536.6	0	-4,-5	-	-	5.658	MINOR
ENSMUSG00000031360	Ctps2	ENSMUST00000112300	ENSMUSP00000107919	TRANSLATION	protein_coding	-	-	3	151	4	3.5	0	88.8	0	-4,-6	-	-	0	MINOR
ENSMUSG00000079702	Ssxb6	ENSMUST00000138642	ENSMUSP00000121642	TRANSLATION	protein_coding	-	CCDS81099.1	1	170	0	0	0.5	80	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000016534	Lamp2	ENSMUST00000016678	ENSMUSP00000016678	TRANSLATION	protein_coding	-	CCDS30092.1	1	415	0	3.24	0.5	366.6	1	3,-2	-	-	11.358	PRINCIPAL:5
ENSMUSG00000016534	Lamp2	ENSMUST00000074913	ENSMUSP00000074448	TRANSLATION	protein_coding	-	CCDS72369.1	1	416	0	3.24	0.5	363.4	1	3,-2	-	-	11.166	ALTERNATIVE:2
ENSMUSG00000016534	Lamp2	ENSMUST00000061755	ENSMUSP00000052283	TRANSLATION	protein_coding	-	CCDS30093.1	1	415	0	3.24	0.5	377.3	1	3,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000016534	Lamp2	ENSMUST00000144663	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016534	Lamp2	ENSMUST00000136817	-	NO_TRANSLATION	retained_intron
ENSMUSG00000096644	Magea1	ENSMUST00000078193	ENSMUSP00000077323	TRANSLATION	protein_coding	-	CCDS30493.1	-	320	0	0.8	0.5	25.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079699	Gm6592	ENSMUST00000115563	ENSMUSP00000111225	TRANSLATION	protein_coding	-	CCDS40849.1	5	168	0	0	0.5	81	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067194	Eif1ax	ENSMUST00000087143	ENSMUSP00000084387	TRANSLATION	protein_coding	-	CCDS41192.1	1	144	0	4.33	17.5	76.4	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000067194	Eif1ax	ENSMUST00000133252	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031200	Mtcp1	ENSMUST00000147830	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031200	Mtcp1	ENSMUST00000143538	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031200	Mtcp1	ENSMUST00000033542	ENSMUSP00000033542	TRANSLATION	protein_coding	-	CCDS30241.1	1	107	0	2.5	8.8	99.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031200	Mtcp1	ENSMUST00000114081	ENSMUSP00000109715	TRANSLATION	protein_coding	-	CCDS30241.1	2	107	0	2.5	8.8	99.3	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000041688	Amot	ENSMUST00000112835	ENSMUSP00000108454	TRANSLATION	protein_coding	-	-	5	737	0	0	0	310.4	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000041688	Amot	ENSMUST00000138187	ENSMUSP00000117777	TRANSLATION	protein_coding	start	-	1	672	0	0	0	310.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041688	Amot	ENSMUST00000143610	ENSMUSP00000120226	TRANSLATION	protein_coding	stop	-	5	522	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041688	Amot	ENSMUST00000125271	ENSMUSP00000116189	TRANSLATION	protein_coding	start	-	5	929	0	0	0	310.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041688	Amot	ENSMUST00000135832	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041688	Amot	ENSMUST00000112836	ENSMUSP00000108455	TRANSLATION	protein_coding	-	CCDS72443.1	5	1126	0	0	0.5	310.4	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000036916	Zfp280c	ENSMUST00000150501	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036916	Zfp280c	ENSMUST00000088898	ENSMUSP00000086288	TRANSLATION	protein_coding	-	CCDS30111.1	1	742	35	1.2	0.5	195.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000036916	Zfp280c	ENSMUST00000114940	ENSMUSP00000110590	TRANSLATION	protein_coding	-	CCDS53065.1	1	693	35	1.2	0.5	195.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036916	Zfp280c	ENSMUST00000143028	-	NO_TRANSLATION	retained_intron
ENSMUSG00000036916	Zfp280c	ENSMUST00000072292	ENSMUSP00000072138	TRANSLATION	protein_coding	-	CCDS53064.1	1	733	35	1.2	0.5	195.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000036916	Zfp280c	ENSMUST00000149058	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036916	Zfp280c	ENSMUST00000076635	ENSMUSP00000075933	TRANSLATION	protein_coding	-	CCDS30111.1	1	742	35	1.2	0.5	195.9	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000031386	Hcfc1	ENSMUST00000128136	ENSMUSP00000115792	TRANSLATION	protein_coding	start	-	5	612	0	4.25	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031386	Hcfc1	ENSMUST00000156204	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031386	Hcfc1	ENSMUST00000114372	ENSMUSP00000110012	TRANSLATION	protein_coding	-	-	5	2090	0	7.6	1.5	50.5	0	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000031386	Hcfc1	ENSMUST00000033761	ENSMUSP00000033761	TRANSLATION	protein_coding	-	CCDS30218.1	1	2045	0	7.6	1.5	50.5	0	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000031386	Hcfc1	ENSMUST00000131091	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031386	Hcfc1	ENSMUST00000128325	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044148	1810030O07Rik	ENSMUST00000060108	ENSMUSP00000059095	TRANSLATION	protein_coding	-	CCDS30024.1	1	320	0	0	6.3	338.3	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000087403	Kantr	ENSMUST00000148326	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087403	Kantr	ENSMUST00000141922	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087403	Kantr	ENSMUST00000195280	ENSMUSP00000151626	TRANSLATION	protein_coding	-	-	2	76	0	0	0	0	0	1,-3	-	-	0	PRINCIPAL:1
ENSMUSG00000087403	Kantr	ENSMUST00000125102	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087403	Kantr	ENSMUST00000149098	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087403	Kantr	ENSMUST00000181635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000087403	Kantr	ENSMUST00000154085	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079513	4932429P05Rik	ENSMUST00000113958	ENSMUSP00000109591	TRANSLATION	protein_coding	-	CCDS41053.1	1	785	0	0	0.5	209.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064127	Med14	ENSMUST00000124070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064127	Med14	ENSMUST00000076016	ENSMUSP00000075395	TRANSLATION	protein_coding	-	-	1	700	0	3.59	0	204.7	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000064127	Med14	ENSMUST00000115481	ENSMUSP00000111143	TRANSLATION	protein_coding	-	-	1	798	0	0	0	0	0	-4,-7	-	-	0	MINOR
ENSMUSG00000064127	Med14	ENSMUST00000124053	-	NO_TRANSLATION	retained_intron
ENSMUSG00000064127	Med14	ENSMUST00000096495	ENSMUSP00000094239	TRANSLATION	protein_coding	-	CCDS40874.1	5	1459	0	3.59	1.5	204.7	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000031342	Gpm6b	ENSMUST00000143263	ENSMUSP00000135378	TRANSLATION	nonsense_mediated_decay	-	-	1	49	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000112235	ENSMUSP00000107854	TRANSLATION	protein_coding	-	CCDS53243.1	1	246	0	0	10.3	343	11	-3,-5	-	-	8.244	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000060210	ENSMUSP00000060442	TRANSLATION	protein_coding	-	CCDS30526.1	1	269	0	0	17.5	343.2	9	-3,-5	-	-	10	PRINCIPAL:3
ENSMUSG00000031342	Gpm6b	ENSMUST00000112233	ENSMUSP00000107852	TRANSLATION	protein_coding	-	CCDS53243.1	1	246	0	0	10.3	343	11	-3,-5	-	-	8.244	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000112227	ENSMUSP00000107846	TRANSLATION	protein_coding	-	CCDS53244.1	1	305	0	0	8.8	343	11	-4,-5	-	-	7.88	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000112223	ENSMUSP00000107842	TRANSLATION	protein_coding	-	CCDS53244.1	1	305	0	0	8.8	343	11	-4,-5	-	-	7.88	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000112224	ENSMUSP00000107843	TRANSLATION	protein_coding	-	CCDS53246.1	1	265	0	0	13.8	343	11	-4,-6	-	-	9.092	ALTERNATIVE:1
ENSMUSG00000031342	Gpm6b	ENSMUST00000112228	ENSMUSP00000107847	TRANSLATION	protein_coding	-	CCDS53247.1	1	288	0	0	15	343.2	9	-4,-6	-	-	9.392	ALTERNATIVE:1
ENSMUSG00000031342	Gpm6b	ENSMUST00000129731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031342	Gpm6b	ENSMUST00000112226	ENSMUSP00000107845	TRANSLATION	protein_coding	-	CCDS53246.1	1	265	0	0	13.8	343	11	-4,-6	-	-	9.092	ALTERNATIVE:1
ENSMUSG00000031342	Gpm6b	ENSMUST00000112229	ENSMUSP00000107848	TRANSLATION	protein_coding	-	CCDS53245.1	1	328	0	0	8.8	343.2	9	-4,-5	-	-	7.892	MINOR
ENSMUSG00000031342	Gpm6b	ENSMUST00000123408	ENSMUSP00000134741	TRANSLATION	nonsense_mediated_decay	-	-	1	89	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031118	1700080O16Rik	ENSMUST00000033449	ENSMUSP00000033449	TRANSLATION	protein_coding	-	CCDS53068.1	1	284	0	0.8	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031118	1700080O16Rik	ENSMUST00000114866	ENSMUSP00000110516	TRANSLATION	protein_coding	-	CCDS53068.1	1	284	0	0.8	0.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040363	Bcor	ENSMUST00000123004	ENSMUSP00000120046	TRANSLATION	protein_coding	stop	-	3	95	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040363	Bcor	ENSMUST00000145872	ENSMUSP00000122829	TRANSLATION	protein_coding	stop	-	2	125	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040363	Bcor	ENSMUST00000115512	ENSMUSP00000111174	TRANSLATION	protein_coding	-	CCDS40872.1	1	1741	0	4.32	1.5	477.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040363	Bcor	ENSMUST00000065143	ENSMUSP00000068618	TRANSLATION	protein_coding	-	CCDS30021.1	1	1725	0	4.32	1.5	477.7	0	-4,-7	-	-	12	PRINCIPAL:4
ENSMUSG00000040363	Bcor	ENSMUST00000043441	ENSMUSP00000048024	TRANSLATION	protein_coding	-	CCDS30022.1	5	1707	0	4.32	1.5	477.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040363	Bcor	ENSMUST00000115513	ENSMUSP00000111175	TRANSLATION	protein_coding	-	CCDS40873.1	1	1759	0	4.32	1.5	477.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000040363	Bcor	ENSMUST00000209776	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040363	Bcor	ENSMUST00000124033	ENSMUSP00000116258	TRANSLATION	protein_coding	-	CCDS30022.1	1	1707	0	4.32	1.5	477.7	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000050232	Cxcr3	ENSMUST00000056614	ENSMUSP00000052444	TRANSLATION	protein_coding	-	CCDS30319.1	1	367	0	0.64	3.9	177.5	0	-4,-7	-	-	13	PRINCIPAL:1
ENSMUSG00000037341	Slc9a7	ENSMUST00000130938	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037341	Slc9a7	ENSMUST00000115393	ENSMUSP00000111051	TRANSLATION	protein_coding	-	-	1	548	0	4.334	0	309.2	12	-2,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000037341	Slc9a7	ENSMUST00000224372	ENSMUSP00000153063	TRANSLATION	protein_coding	start	-	-	313	0	0.82	0	95.5	7	-4,-2	-	-	-1	MINOR
ENSMUSG00000037341	Slc9a7	ENSMUST00000072451	ENSMUSP00000072274	TRANSLATION	protein_coding	-	CCDS40884.1	1	726	0	4.334	2.7	309.2	12	-2,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000037341	Slc9a7	ENSMUST00000151845	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025038	Efhc2	ENSMUST00000026014	ENSMUSP00000026014	TRANSLATION	protein_coding	-	CCDS40883.1	1	750	3	2.2	2.7	313.6	0	-4,-2	-	-	15	PRINCIPAL:1
ENSMUSG00000031379	Pir	ENSMUST00000123343	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031379	Pir	ENSMUST00000145412	ENSMUSP00000118045	TRANSLATION	protein_coding	stop	-	5	253	4	6.5	0	176.5	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031379	Pir	ENSMUST00000129296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031379	Pir	ENSMUST00000033749	ENSMUSP00000033749	TRANSLATION	protein_coding	-	CCDS30520.1	1	290	4	7.5	10.8	222.2	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000031379	Pir	ENSMUST00000127685	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031372	Trex2	ENSMUST00000033738	ENSMUSP00000033738	TRANSLATION	protein_coding	-	CCDS30201.1	1	236	11	1	6.3	22.7	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000046532	Ar	ENSMUST00000052837	ENSMUSP00000052648	TRANSLATION	protein_coding	-	CCDS30294.1	1	899	28	7	0.5	958.4	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000052549	Arl13a	ENSMUST00000064476	ENSMUSP00000064416	TRANSLATION	protein_coding	-	CCDS53182.1	1	372	14	2.93	0.5	102.4	0	-4,-7	-	-	18	PRINCIPAL:1
ENSMUSG00000040456	H2ap	ENSMUST00000044987	ENSMUSP00000043734	TRANSLATION	protein_coding	-	CCDS30012.1	-	117	0	0.6	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000067369	Trmt2b	ENSMUST00000145066	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067369	Trmt2b	ENSMUST00000128115	ENSMUSP00000138612	TRANSLATION	nonsense_mediated_decay	-	-	2	458	16	2.94	0	39.5	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000067369	Trmt2b	ENSMUST00000087540	ENSMUSP00000084819	TRANSLATION	protein_coding	-	CCDS53183.1	1	126	0	0.36	0.5	0	0	-4,-1	-	-	0	MINOR
ENSMUSG00000067369	Trmt2b	ENSMUST00000113252	ENSMUSP00000108878	TRANSLATION	protein_coding	-	CCDS41121.1	1	493	17	3.6	1.5	40	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000067369	Trmt2b	ENSMUST00000087541	ENSMUSP00000084820	TRANSLATION	protein_coding	-	CCDS41121.1	1	493	17	3.6	1.5	40	0	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000068149	Tex13c3	ENSMUST00000089246	ENSMUSP00000086657	TRANSLATION	protein_coding	-	-	1	219	0	0	0	212.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050332	Amer1	ENSMUST00000084535	ENSMUSP00000109502	TRANSLATION	protein_coding	-	CCDS41067.1	1	1132	0	0	0.5	418.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000040808	S100g	ENSMUST00000038769	ENSMUSP00000045120	TRANSLATION	protein_coding	-	CCDS41203.1	1	79	13	2	7.5	85.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000109368	Gm45015	ENSMUST00000207943	ENSMUSP00000146837	TRANSLATION	protein_coding	-	-	5	184	0	0	0	179.8	0	-2,-3	-	-	6	PRINCIPAL:1
ENSMUSG00000031167	Rbm3	ENSMUST00000129947	ENSMUSP00000138456	TRANSLATION	nonsense_mediated_decay	-	-	5	90	0	2.6	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031167	Rbm3	ENSMUST00000155599	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031167	Rbm3	ENSMUST00000040010	ENSMUSP00000038964	TRANSLATION	protein_coding	-	CCDS29987.1	1	154	0	3.4	5.1	86.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000031167	Rbm3	ENSMUST00000115617	ENSMUSP00000111280	TRANSLATION	protein_coding	-	CCDS29987.1	1	154	0	3.4	5.1	86.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000031167	Rbm3	ENSMUST00000115619	ENSMUSP00000111282	TRANSLATION	protein_coding	-	CCDS52988.1	3	153	0	3.4	5.1	86.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000031167	Rbm3	ENSMUST00000145450	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031167	Rbm3	ENSMUST00000141629	ENSMUSP00000138705	TRANSLATION	nonsense_mediated_decay	-	-	1	90	0	2.6	0	82.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031167	Rbm3	ENSMUST00000115621	ENSMUSP00000111284	TRANSLATION	protein_coding	-	CCDS52988.1	1	153	0	3.4	5.1	86.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000031167	Rbm3	ENSMUST00000141925	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031167	Rbm3	ENSMUST00000115615	ENSMUSP00000111277	TRANSLATION	protein_coding	-	CCDS52988.1	1	153	0	3.4	5.1	86.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000031167	Rbm3	ENSMUST00000115616	ENSMUSP00000111279	TRANSLATION	protein_coding	-	CCDS29987.1	1	154	0	3.4	5.1	86.4	0	-4,-5	-	-	14	PRINCIPAL:3
ENSMUSG00000052364	B630019K06Rik	ENSMUST00000064196	ENSMUSP00000070261	TRANSLATION	protein_coding	-	-	-	333	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000044400	Sowahd	ENSMUST00000060057	ENSMUSP00000058152	TRANSLATION	protein_coding	-	CCDS30067.1	-	327	0	0.2	0.5	30.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099443	H2al1h	ENSMUST00000177926	ENSMUSP00000136794	TRANSLATION	protein_coding	-	CCDS57734.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000100448	H2al1k	ENSMUST00000178196	ENSMUSP00000137043	TRANSLATION	protein_coding	-	CCDS52997.1	-	105	0	0.8	0.5	41.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095445	H2al1i	ENSMUST00000164729	ENSMUSP00000125841	TRANSLATION	protein_coding	-	CCDS57735.1	-	105	0	0.8	0.5	45.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000001924	Uba1	ENSMUST00000136915	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001924	Uba1	ENSMUST00000001989	ENSMUSP00000001989	TRANSLATION	protein_coding	-	CCDS30044.1	1	1058	19	22.85	8.8	1060.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000001924	Uba1	ENSMUST00000130694	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001924	Uba1	ENSMUST00000137892	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000001924	Uba1	ENSMUST00000089217	ENSMUSP00000086626	TRANSLATION	protein_coding	-	CCDS30044.1	1	1058	19	22.85	8.8	1060.4	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000001924	Uba1	ENSMUST00000152235	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095082	Gm15091	ENSMUST00000112740	ENSMUSP00000108360	TRANSLATION	protein_coding	-	CCDS53217.1	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000050089	Akap4	ENSMUST00000115750	ENSMUSP00000111416	TRANSLATION	protein_coding	-	CCDS40839.1	5	840	0	0	0.5	431.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000050089	Akap4	ENSMUST00000057101	ENSMUSP00000050962	TRANSLATION	protein_coding	-	CCDS40838.1	1	849	0	0	1.5	431.9	0	-4,-5	-	-	6	PRINCIPAL:4
ENSMUSG00000050089	Akap4	ENSMUST00000115751	ENSMUSP00000111417	TRANSLATION	protein_coding	-	CCDS40839.1	1	840	0	0	0.5	431.9	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031347	Cetn2	ENSMUST00000152200	ENSMUSP00000117704	TRANSLATION	protein_coding	stop	-	3	111	13	2.75	0	53.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031347	Cetn2	ENSMUST00000114550	ENSMUSP00000110197	TRANSLATION	protein_coding	-	-	3	163	21	4.25	1.2	99.5	0	-4,-6	-	-	17.4	MINOR
ENSMUSG00000031347	Cetn2	ENSMUST00000114551	ENSMUSP00000110198	TRANSLATION	protein_coding	-	CCDS41003.1	1	172	21	4.58	10.9	99.5	0	-4,-2	-	-	21	PRINCIPAL:1
ENSMUSG00000031347	Cetn2	ENSMUST00000033713	ENSMUSP00000033713	TRANSLATION	protein_coding	-	-	1	163	21	4.25	1.2	99.5	0	-4,-6	-	-	17.4	MINOR
ENSMUSG00000001131	Timp1	ENSMUST00000009530	ENSMUSP00000009530	TRANSLATION	protein_coding	-	CCDS30046.1	1	205	0	4.55	4.1	203.6	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000001131	Timp1	ENSMUST00000115342	ENSMUSP00000110999	TRANSLATION	protein_coding	-	CCDS30046.1	1	205	0	4.55	4.1	203.6	0	3,-2	-	-	13	PRINCIPAL:1
ENSMUSG00000051220	Ercc6l	ENSMUST00000056904	ENSMUSP00000050592	TRANSLATION	protein_coding	-	CCDS30321.1	1	1240	5	0.16	0.5	229.8	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000037086	Prr32	ENSMUST00000040002	ENSMUSP00000038655	TRANSLATION	protein_coding	-	CCDS53063.1	1	284	0	0	1.5	454.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000051827	Rhox2a	ENSMUST00000173650	ENSMUSP00000134267	TRANSLATION	protein_coding	-	CCDS81118.1	1	183	0	0.7	0.5	34	0	-4,-5	-	-	7.812	MINOR
ENSMUSG00000051827	Rhox2a	ENSMUST00000063340	ENSMUSP00000067190	TRANSLATION	protein_coding	-	CCDS30075.1	1	191	0	1.2	0.5	47.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073085	Cldn34b4	ENSMUST00000178974	ENSMUSP00000137037	TRANSLATION	protein_coding	-	CCDS53116.1	5	211	0	0.42	1.5	45.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073085	Cldn34b4	ENSMUST00000101419	ENSMUSP00000098964	TRANSLATION	protein_coding	-	CCDS53116.1	1	211	0	0.42	1.5	45.9	4	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079317	Trappc2	ENSMUST00000112194	ENSMUSP00000107813	TRANSLATION	protein_coding	-	CCDS41208.1	5	140	0	3.83	18.3	169.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000079317	Trappc2	ENSMUST00000112192	ENSMUSP00000107811	TRANSLATION	protein_coding	-	CCDS85828.1	1	72	0	2	0.5	71.3	0	-4,-5	-	-	2.43	MINOR
ENSMUSG00000079317	Trappc2	ENSMUST00000154573	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079317	Trappc2	ENSMUST00000116495	ENSMUSP00000112195	TRANSLATION	protein_coding	-	CCDS41208.1	1	140	0	3.83	18.3	169.8	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032894	1700031F05Rik	ENSMUST00000048061	ENSMUSP00000044360	TRANSLATION	protein_coding	-	CCDS53160.1	1	191	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000032894	1700031F05Rik	ENSMUST00000124592	ENSMUSP00000136319	TRANSLATION	nonsense_mediated_decay	-	-	1	191	0	0	0.5	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000054626	Xlr	ENSMUST00000067782	ENSMUSP00000066162	TRANSLATION	protein_coding	-	CCDS81127.1	1	187	0	3	0.5	98.8	0	-4,-5	-	-	8.958	MINOR
ENSMUSG00000054626	Xlr	ENSMUST00000114810	ENSMUSP00000110458	TRANSLATION	protein_coding	-	CCDS30139.1	1	208	0	3.6	0.5	129.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054626	Xlr	ENSMUST00000067763	ENSMUSP00000068044	TRANSLATION	protein_coding	-	CCDS30139.1	1	208	0	3.6	0.5	129.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031010	Usp9x	ENSMUST00000133997	ENSMUSP00000134612	TRANSLATION	protein_coding	start	-	5	345	0	0	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000031010	Usp9x	ENSMUST00000149021	ENSMUSP00000133948	TRANSLATION	protein_coding	start/stop	-	3	174	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031010	Usp9x	ENSMUST00000139764	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031010	Usp9x	ENSMUST00000174762	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031010	Usp9x	ENSMUST00000089302	ENSMUSP00000086716	TRANSLATION	protein_coding	-	CCDS40875.1	1	2554	8	2.32	6.3	168.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031010	Usp9x	ENSMUST00000124097	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031010	Usp9x	ENSMUST00000169594	ENSMUSP00000129373	TRANSLATION	protein_coding	stop	-	1	755	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036790	Slitrk2	ENSMUST00000166241	ENSMUSP00000130057	TRANSLATION	protein_coding	-	CCDS30169.1	2	846	0	0.8	8.5	116.3	1	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000036790	Slitrk2	ENSMUST00000036043	ENSMUSP00000044094	TRANSLATION	protein_coding	-	CCDS30169.1	1	846	0	0.8	8.5	116.3	1	0,-3	-	-	15	PRINCIPAL:1
ENSMUSG00000016319	Slc25a5	ENSMUST00000126608	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016319	Slc25a5	ENSMUST00000156672	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016319	Slc25a5	ENSMUST00000016463	ENSMUSP00000016463	TRANSLATION	protein_coding	-	CCDS30062.1	1	298	46	4	21.5	226.8	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000098559	Gm15013	ENSMUST00000183728	ENSMUSP00000138884	TRANSLATION	protein_coding	-	-	-	266	0	1	0	315.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000098559	Gm15013	ENSMUST00000183537	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000095814	Btbd35f7	ENSMUST00000105007	ENSMUSP00000100624	TRANSLATION	protein_coding	-	CCDS40836.1	-	498	0	0	0.5	38.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079639	Rhox4a	ENSMUST00000173298	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079639	Rhox4a	ENSMUST00000115194	ENSMUSP00000110848	TRANSLATION	protein_coding	-	CCDS40930.1	1	205	0	0.98	0.5	39.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000049929	Lpar4	ENSMUST00000060576	ENSMUSP00000053986	TRANSLATION	protein_coding	-	CCDS30345.1	1	370	0	0.6	6.3	158.9	0	-4,-6	-	-	14	PRINCIPAL:1
ENSMUSG00000071738	Cldn34b3	ENSMUST00000096389	ENSMUSP00000094120	TRANSLATION	protein_coding	-	CCDS53115.1	1	209	0	0.2	1.5	44.6	0	0,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000000787	Ddx3x	ENSMUST00000153851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000787	Ddx3x	ENSMUST00000000804	ENSMUSP00000000804	TRANSLATION	protein_coding	-	CCDS30027.1	1	662	20	10.55	7.5	279.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000000787	Ddx3x	ENSMUST00000153611	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000787	Ddx3x	ENSMUST00000149639	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000787	Ddx3x	ENSMUST00000123096	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031424	Kir3dl1	ENSMUST00000113105	ENSMUSP00000108729	TRANSLATION	protein_coding	-	CCDS41134.1	1	409	0	3.4	0.5	58.5	2	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031424	Kir3dl1	ENSMUST00000113104	ENSMUSP00000108728	TRANSLATION	protein_coding	-	CCDS81176.1	1	316	0	2.4	0.5	24	2	1,-2	-	-	6.462	MINOR
ENSMUSG00000025037	Maoa	ENSMUST00000026013	ENSMUSP00000026013	TRANSLATION	protein_coding	-	CCDS30033.1	1	526	36	13.5	1.5	237.4	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000063785	Utp14a	ENSMUST00000125966	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000063785	Utp14a	ENSMUST00000080713	ENSMUSP00000079538	TRANSLATION	protein_coding	-	CCDS30107.1	1	767	0	0	1.5	586.2	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000063785	Utp14a	ENSMUST00000152624	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056380	Gpr50	ENSMUST00000070449	ENSMUSP00000064608	TRANSLATION	protein_coding	-	CCDS30181.1	1	591	0	0.68	1.5	162.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056380	Gpr50	ENSMUST00000144712	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056380	Gpr50	ENSMUST00000131554	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000056815	Gm6812	ENSMUST00000074894	ENSMUSP00000074433	TRANSLATION	protein_coding	-	CCDS40994.1	1	112	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000037369	Kdm6a	ENSMUST00000052368	ENSMUSP00000061539	TRANSLATION	protein_coding	-	CCDS30037.1	1	1424	15	16.139	0.5	145.9	0	-2,-4	-	-	17.34	MINOR
ENSMUSG00000037369	Kdm6a	ENSMUST00000044484	ENSMUSP00000045862	TRANSLATION	protein_coding	-	CCDS81102.1	5	1401	15	16.469	5.3	145.9	0	-2,-4	-	-	20	PRINCIPAL:1
ENSMUSG00000037369	Kdm6a	ENSMUST00000224255	ENSMUSP00000153167	TRANSLATION	protein_coding	start/stop	-	-	236	0	1.578	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037369	Kdm6a	ENSMUST00000155161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037369	Kdm6a	ENSMUST00000223885	ENSMUSP00000153609	TRANSLATION	nonsense_mediated_decay	-	-	-	224	0	1.585	0	27.9	0	-2,-4	-	-	-1	MINOR
ENSMUSG00000037369	Kdm6a	ENSMUST00000224084	ENSMUSP00000153267	TRANSLATION	protein_coding	start/stop	-	-	369	0	1.13	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000037369	Kdm6a	ENSMUST00000226046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037369	Kdm6a	ENSMUST00000130978	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037369	Kdm6a	ENSMUST00000225738	-	NO_TRANSLATION	retained_intron
ENSMUSG00000037369	Kdm6a	ENSMUST00000225336	ENSMUSP00000153215	TRANSLATION	protein_coding	start	-	-	997	15	11.43	0	110.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036537	Rnf113a1	ENSMUST00000046433	ENSMUSP00000042569	TRANSLATION	protein_coding	-	CCDS30072.1	-	341	12	0.4	3.9	67.1	0	-4,-6	-	-	19	PRINCIPAL:1
ENSMUSG00000016239	Lonrf3	ENSMUST00000126147	ENSMUSP00000118175	TRANSLATION	protein_coding	start/stop	-	3	238	0	2.86	0	0	0	-1,3	-	-	-1	MINOR
ENSMUSG00000016239	Lonrf3	ENSMUST00000016383	ENSMUSP00000016383	TRANSLATION	protein_coding	-	CCDS30059.1	1	753	16	4.84	0.5	124.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000016239	Lonrf3	ENSMUST00000135758	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035150	Eif2s3x	ENSMUST00000050328	ENSMUSP00000059395	TRANSLATION	protein_coding	-	CCDS30277.1	1	472	31	10.5	21.5	126.9	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000035150	Eif2s3x	ENSMUST00000127963	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035150	Eif2s3x	ENSMUST00000113922	ENSMUSP00000109555	TRANSLATION	protein_coding	-	-	1	344	28	7.75	0	115.4	0	-4,-5	-	-	9.81	MINOR
ENSMUSG00000006200	Rhox6	ENSMUST00000006362	ENSMUSP00000006362	TRANSLATION	protein_coding	-	CCDS30080.1	1	227	0	1.2	0.5	64.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025333	Gpr143	ENSMUST00000151819	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025333	Gpr143	ENSMUST00000139310	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025333	Gpr143	ENSMUST00000026383	ENSMUSP00000026383	TRANSLATION	protein_coding	-	CCDS30476.1	1	405	0	0	1.5	739.7	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000118441	Btbd35f26	ENSMUST00000238765	ENSMUSP00000158617	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	41.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000050029	Rap2c	ENSMUST00000053593	ENSMUSP00000058391	TRANSLATION	protein_coding	-	CCDS30121.1	1	183	24	2	21.5	188.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000079633	Rhox4d	ENSMUST00000172476	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079633	Rhox4d	ENSMUST00000115175	ENSMUSP00000110829	TRANSLATION	protein_coding	-	CCDS40935.1	1	205	0	0.98	0.5	37.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073062	Zxdb	ENSMUST00000101388	ENSMUSP00000100524	TRANSLATION	protein_coding	-	CCDS41065.1	-	873	38	0	0.5	105.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000050921	P2ry10	ENSMUST00000053375	ENSMUSP00000061296	TRANSLATION	protein_coding	-	CCDS30346.1	1	328	0	0.6	3.9	106.6	7	-4,-7	-	-	11.998	PRINCIPAL:1
ENSMUSG00000050921	P2ry10	ENSMUST00000150494	ENSMUSP00000115201	TRANSLATION	protein_coding	start	-	1	393	0	0.72	0	106.6	8	-2,-1	-	-	-1	MINOR
ENSMUSG00000050921	P2ry10	ENSMUST00000118666	ENSMUSP00000113507	TRANSLATION	protein_coding	-	CCDS30346.1	1	328	0	0.6	3.9	106.6	7	-4,-7	-	-	11.998	PRINCIPAL:1
ENSMUSG00000034457	Eda2r	ENSMUST00000126609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034457	Eda2r	ENSMUST00000037353	ENSMUSP00000041210	TRANSLATION	protein_coding	-	CCDS30293.1	1	297	0	0	3.9	52.3	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000034457	Eda2r	ENSMUST00000113832	ENSMUSP00000109463	TRANSLATION	protein_coding	-	CCDS30293.1	1	297	0	0	3.9	52.3	1	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000034457	Eda2r	ENSMUST00000126283	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031311	Nono	ENSMUST00000148312	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031311	Nono	ENSMUST00000134783	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031311	Nono	ENSMUST00000136251	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031311	Nono	ENSMUST00000147498	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031311	Nono	ENSMUST00000147708	ENSMUSP00000122890	TRANSLATION	protein_coding	stop	-	5	98	0	1	0	24.4	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031311	Nono	ENSMUST00000126019	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031311	Nono	ENSMUST00000033673	ENSMUSP00000033673	TRANSLATION	protein_coding	-	CCDS30316.1	1	473	0	5.95	5.1	199	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000008682	Rpl10	ENSMUST00000146584	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008682	Rpl10	ENSMUST00000138954	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008682	Rpl10	ENSMUST00000149171	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000008682	Rpl10	ENSMUST00000074085	ENSMUSP00000082055	TRANSLATION	protein_coding	-	CCDS41019.1	1	214	0	5.38	17.5	150.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000008682	Rpl10	ENSMUST00000135690	ENSMUSP00000119500	TRANSLATION	protein_coding	stop	-	5	166	0	3.08	0	81.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008682	Rpl10	ENSMUST00000144434	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008682	Rpl10	ENSMUST00000134330	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008682	Rpl10	ENSMUST00000008826	ENSMUSP00000008826	TRANSLATION	protein_coding	-	CCDS41019.1	1	214	0	5.38	17.5	150.6	0	-4,-6	-	-	16	PRINCIPAL:1
ENSMUSG00000008682	Rpl10	ENSMUST00000142142	-	NO_TRANSLATION	retained_intron
ENSMUSG00000008682	Rpl10	ENSMUST00000151702	ENSMUSP00000115919	TRANSLATION	protein_coding	stop	-	5	201	0	5.08	1.2	150.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000008682	Rpl10	ENSMUST00000125775	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025860	Xiap	ENSMUST00000224454	ENSMUSP00000153528	TRANSLATION	protein_coding	stop	-	-	106	4	2	0	72.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025860	Xiap	ENSMUST00000146874	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025860	Xiap	ENSMUST00000150635	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025860	Xiap	ENSMUST00000126375	ENSMUSP00000121482	TRANSLATION	protein_coding	stop	-	3	52	0	1	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025860	Xiap	ENSMUST00000055483	ENSMUSP00000061074	TRANSLATION	protein_coding	-	CCDS30098.1	1	496	20	7.25	6.3	263.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025860	Xiap	ENSMUST00000145065	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025860	Xiap	ENSMUST00000115094	ENSMUSP00000110746	TRANSLATION	protein_coding	-	CCDS30098.1	5	496	20	7.25	6.3	263.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025860	Xiap	ENSMUST00000225851	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025860	Xiap	ENSMUST00000141316	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025860	Xiap	ENSMUST00000026978	ENSMUSP00000026978	TRANSLATION	protein_coding	-	CCDS30098.1	1	496	20	7.25	6.3	263.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000025860	Xiap	ENSMUST00000115095	ENSMUSP00000110747	TRANSLATION	protein_coding	-	CCDS30098.1	1	496	20	7.25	6.3	263.7	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000068173	Btg1b	ENSMUST00000089286	-	NO_TRANSLATION	unprocessed_pseudogene
ENSMUSG00000068173	Btg1b	ENSMUST00000184432	ENSMUSP00000139062	TRANSLATION	protein_coding	-	CCDS57753.1	1	161	0	1	1.5	137.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000081443	Gm3880	ENSMUST00000122154	ENSMUSP00000147867	TRANSLATION	protein_coding	-	-	5	72	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000031196	F8	ENSMUST00000151772	ENSMUSP00000117919	TRANSLATION	protein_coding	stop	-	2	116	10	3	0	24.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031196	F8	ENSMUST00000033539	ENSMUSP00000033539	TRANSLATION	protein_coding	-	CCDS30238.1	1	2319	26	25.25	0.5	258.4	0	4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000031196	F8	ENSMUST00000147349	ENSMUSP00000114207	TRANSLATION	protein_coding	stop	-	5	196	10	4.8	0	28.1	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031196	F8	ENSMUST00000114085	ENSMUSP00000109719	TRANSLATION	protein_coding	-	CCDS53114.1	1	2249	25	24.25	0.5	258.4	0	4,-1	-	-	15.336	MINOR
ENSMUSG00000039556	Ppp1r3f	ENSMUST00000115742	ENSMUSP00000111407	TRANSLATION	protein_coding	-	CCDS29964.2	1	799	0	0.24	0.5	92.9	1	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000039556	Ppp1r3f	ENSMUST00000132788	ENSMUSP00000116002	TRANSLATION	protein_coding	start/stop	-	5	272	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039556	Ppp1r3f	ENSMUST00000150787	ENSMUSP00000122903	TRANSLATION	protein_coding	-	CCDS72328.1	1	800	0	0.24	0.5	92.9	1	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000039556	Ppp1r3f	ENSMUST00000123090	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039556	Ppp1r3f	ENSMUST00000142447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000094307	Btbd35f28	ENSMUST00000105015	ENSMUSP00000100632	TRANSLATION	protein_coding	-	CCDS52976.1	-	498	0	0	0.5	41.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000000223	Drp2	ENSMUST00000000228	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000223	Drp2	ENSMUST00000153424	ENSMUSP00000115246	TRANSLATION	protein_coding	-	CCDS30394.1	1	957	4	6.6	7.5	365.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000000223	Drp2	ENSMUST00000113224	ENSMUSP00000108850	TRANSLATION	protein_coding	-	-	5	981	4	6.6	0.5	365.8	0	-2,1	-	-	16	MINOR
ENSMUSG00000000223	Drp2	ENSMUST00000142146	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000000223	Drp2	ENSMUST00000113228	ENSMUSP00000108854	TRANSLATION	protein_coding	-	CCDS30394.1	5	957	4	6.6	7.5	365.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000000223	Drp2	ENSMUST00000113226	ENSMUSP00000108852	TRANSLATION	protein_coding	-	CCDS30394.1	5	957	4	6.6	7.5	365.8	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000031111	Igsf1	ENSMUST00000114891	ENSMUSP00000110541	TRANSLATION	protein_coding	-	CCDS40967.1	1	232	0	1.44	0.5	31.7	0	1,-3	-	-	0	MINOR
ENSMUSG00000031111	Igsf1	ENSMUST00000072037	ENSMUSP00000071919	TRANSLATION	protein_coding	-	CCDS40966.1	1	762	0	3.98	0.5	63.6	0	1,-3	-	-	0.942	MINOR
ENSMUSG00000031111	Igsf1	ENSMUST00000135492	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031111	Igsf1	ENSMUST00000033442	ENSMUSP00000033442	TRANSLATION	protein_coding	-	CCDS40964.1	1	1317	0	7.74	1.5	147.9	0	1,-3	-	-	12	PRINCIPAL:1
ENSMUSG00000031111	Igsf1	ENSMUST00000114893	ENSMUSP00000110543	TRANSLATION	protein_coding	-	CCDS40965.1	1	775	0	4.82	0.5	84.3	0	3,-2	-	-	2.346	MINOR
ENSMUSG00000002010	Idh3g	ENSMUST00000156299	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000145341	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000002010	Idh3g	ENSMUST00000052761	ENSMUSP00000056502	TRANSLATION	protein_coding	-	CCDS30212.1	1	393	33	9.6	7.5	244.6	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000002010	Idh3g	ENSMUST00000130119	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000129367	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000142707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000129070	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000148419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000002010	Idh3g	ENSMUST00000140944	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000090102	Gm4985	ENSMUST00000118300	ENSMUSP00000112982	TRANSLATION	protein_coding	-	-	-	410	23	0.6	0.5	252.9	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000033361	Prrg3	ENSMUST00000126362	ENSMUSP00000118155	TRANSLATION	protein_coding	stop	-	2	52	12	1	0	48.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000033361	Prrg3	ENSMUST00000170096	ENSMUSP00000128073	TRANSLATION	protein_coding	-	CCDS41001.1	1	231	12	1	7.5	70.7	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000033361	Prrg3	ENSMUST00000048790	ENSMUSP00000038947	TRANSLATION	protein_coding	-	CCDS41001.1	1	231	12	1	7.5	70.7	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000084063	Gm5934	ENSMUST00000120734	ENSMUSP00000113623	TRANSLATION	protein_coding	-	CCDS53020.1	5	212	0	0	0.5	35	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000034311	Kif4	ENSMUST00000145319	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000034311	Kif4	ENSMUST00000156386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000034311	Kif4	ENSMUST00000048962	ENSMUSP00000048383	TRANSLATION	protein_coding	-	CCDS30305.1	1	1231	11	8	1.5	389.2	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000090122	Kcne1l	ENSMUST00000134825	ENSMUSP00000127773	TRANSLATION	protein_coding	-	CCDS30447.1	-	143	0	0.4	1.5	22.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000047238	Mageh1	ENSMUST00000051484	ENSMUSP00000057157	TRANSLATION	protein_coding	-	CCDS30478.1	-	218	0	0.6	1.5	0	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000079479	Gm9112	ENSMUST00000113610	ENSMUSP00000109240	TRANSLATION	protein_coding	-	CCDS53157.1	2	75	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000079627	Rhox2h	ENSMUST00000115162	ENSMUSP00000110816	TRANSLATION	protein_coding	-	CCDS40942.1	1	191	0	1.4	0.5	48.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079627	Rhox2h	ENSMUST00000184088	ENSMUSP00000139288	TRANSLATION	protein_coding	start	-	5	91	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031270	4930513O06Rik	ENSMUST00000033625	ENSMUSP00000033625	TRANSLATION	protein_coding	-	CCDS57775.1	1	161	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000118465	Btbd35f19	ENSMUST00000238426	ENSMUSP00000158776	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	41.2	0	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000031297	Slc7a3	ENSMUST00000113710	ENSMUSP00000109339	TRANSLATION	protein_coding	-	CCDS30309.1	5	618	0	1.76	5.3	195.7	13	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000031297	Slc7a3	ENSMUST00000101362	ENSMUSP00000098914	TRANSLATION	protein_coding	-	CCDS30309.1	1	618	0	1.76	5.3	195.7	13	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000031297	Slc7a3	ENSMUST00000126282	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031297	Slc7a3	ENSMUST00000151922	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031297	Slc7a3	ENSMUST00000073927	ENSMUSP00000073582	TRANSLATION	protein_coding	-	CCDS30309.1	1	618	0	1.76	5.3	195.7	13	-4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000031297	Slc7a3	ENSMUST00000138162	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031297	Slc7a3	ENSMUST00000144410	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031431	Tsc22d3	ENSMUST00000112996	ENSMUSP00000108620	TRANSLATION	protein_coding	-	CCDS41150.1	1	201	0	0.8	1.5	97	0	-4,-5	-	-	12.231	MINOR
ENSMUSG00000031431	Tsc22d3	ENSMUST00000112995	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031431	Tsc22d3	ENSMUST00000133023	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031431	Tsc22d3	ENSMUST00000055738	ENSMUSP00000062589	TRANSLATION	protein_coding	-	CCDS30440.1	1	137	0	0.8	7.5	97	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000031431	Tsc22d3	ENSMUST00000123898	ENSMUSP00000123569	TRANSLATION	protein_coding	-	-	5	113	0	0.8	3.6	97	0	-4,-6	-	-	13.2	MINOR
ENSMUSG00000031431	Tsc22d3	ENSMUST00000152048	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079460	4933403O08Rik	ENSMUST00000152343	ENSMUSP00000121926	TRANSLATION	protein_coding	-	CCDS57772.1	1	379	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000079460	4933403O08Rik	ENSMUST00000132037	ENSMUSP00000119509	TRANSLATION	protein_coding	-	-	1	264	0	0	0	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000079460	4933403O08Rik	ENSMUST00000164272	ENSMUSP00000132926	TRANSLATION	protein_coding	-	CCDS57772.1	1	379	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000072969	Armcx5	ENSMUST00000128847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000072969	Armcx5	ENSMUST00000096321	ENSMUSP00000094045	TRANSLATION	protein_coding	-	CCDS30408.1	1	606	0	0	0.5	369.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025597	Klhl4	ENSMUST00000133447	ENSMUSP00000118072	TRANSLATION	protein_coding	start	-	1	624	0	7.44	0	423.4	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000025597	Klhl4	ENSMUST00000113371	ENSMUSP00000108998	TRANSLATION	protein_coding	-	CCDS72423.1	1	711	0	7.92	1.5	455	0	-4,-7	-	-	9.834	MINOR
ENSMUSG00000025597	Klhl4	ENSMUST00000040504	ENSMUSP00000038080	TRANSLATION	protein_coding	-	CCDS41108.2	1	717	0	8.184	1.5	482.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073012	Fnd3c2	ENSMUST00000091282	ENSMUSP00000088827	TRANSLATION	protein_coding	-	CCDS30341.1	1	941	0	10.12	0.5	163.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000054727	1700013H16Rik	ENSMUST00000067940	ENSMUSP00000063474	TRANSLATION	protein_coding	-	CCDS53071.1	1	291	0	4.5	0.5	139.4	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073131	Vma21	ENSMUST00000114576	ENSMUSP00000110223	TRANSLATION	protein_coding	-	CCDS41000.1	1	101	1	0	12.8	83.1	6	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000073131	Vma21	ENSMUST00000114577	ENSMUSP00000110224	TRANSLATION	protein_coding	-	CCDS72388.1	3	120	1	0	5.1	83.1	6	-4,-2	-	-	7.388	MINOR
ENSMUSG00000073131	Vma21	ENSMUST00000154054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073131	Vma21	ENSMUST00000138979	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000073131	Vma21	ENSMUST00000114575	ENSMUSP00000110222	TRANSLATION	protein_coding	-	CCDS72389.1	2	134	1	0	0.5	83.1	6	-4,-2	-	-	6	MINOR
ENSMUSG00000050071	Bex1	ENSMUST00000058125	ENSMUSP00000060005	TRANSLATION	protein_coding	-	CCDS30417.1	1	128	0	0	1.5	65.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050071	Bex1	ENSMUST00000113120	ENSMUSP00000108745	TRANSLATION	protein_coding	-	CCDS30417.1	3	128	0	0	1.5	65.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000050071	Bex1	ENSMUST00000142172	-	NO_TRANSLATION	retained_intron
ENSMUSG00000050071	Bex1	ENSMUST00000113118	ENSMUSP00000108743	TRANSLATION	protein_coding	-	CCDS30417.1	2	128	0	0	1.5	65.7	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000052854	Nrk	ENSMUST00000155201	-	NO_TRANSLATION	retained_intron
ENSMUSG00000052854	Nrk	ENSMUST00000142132	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000052854	Nrk	ENSMUST00000064937	ENSMUSP00000063397	TRANSLATION	protein_coding	-	CCDS41143.1	1	1455	19	8.035	0.5	321.9	0	-4,-5	-	-	18	PRINCIPAL:2
ENSMUSG00000052854	Nrk	ENSMUST00000113052	ENSMUSP00000108675	TRANSLATION	protein_coding	-	-	5	1455	19	8.035	0.5	321.9	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000052854	Nrk	ENSMUST00000131829	ENSMUSP00000115962	TRANSLATION	nonsense_mediated_decay	-	-	5	1326	19	8.035	0	279.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000000266	Mid2	ENSMUST00000112988	ENSMUSP00000108612	TRANSLATION	protein_coding	-	-	5	715	21	6.7	7.5	118.2	0	-4,-7	-	-	18.108	MINOR
ENSMUSG00000000266	Mid2	ENSMUST00000128809	ENSMUSP00000123221	TRANSLATION	protein_coding	stop	-	5	219	21	0.8	0	73.9	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000000266	Mid2	ENSMUST00000140144	-	NO_TRANSLATION	retained_intron
ENSMUSG00000000266	Mid2	ENSMUST00000112990	ENSMUSP00000108614	TRANSLATION	protein_coding	-	-	5	685	21	7.2	3.7	149.7	0	-4,-7	-	-	19.245	PRINCIPAL:1
ENSMUSG00000000266	Mid2	ENSMUST00000112993	ENSMUSP00000108617	TRANSLATION	protein_coding	-	CCDS41151.1	1	685	21	7.2	3.7	149.7	0	-4,-7	-	-	19.245	PRINCIPAL:1
ENSMUSG00000051706	Olfr1325	ENSMUST00000216007	ENSMUSP00000150727	TRANSLATION	protein_coding	-	-	5	312	0	0.4	1.8	172.1	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000051706	Olfr1325	ENSMUST00000216108	ENSMUSP00000150136	TRANSLATION	protein_coding	-	-	5	312	0	0.4	1.8	172.1	6	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000051706	Olfr1325	ENSMUST00000054541	ENSMUSP00000052441	TRANSLATION	protein_coding	-	CCDS30234.1	-	315	0	0.4	1.8	172.1	6	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000031095	Cul4b	ENSMUST00000016681	ENSMUSP00000016681	TRANSLATION	protein_coding	-	-	5	896	0	17.75	0	793.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000031095	Cul4b	ENSMUST00000147129	ENSMUSP00000136083	TRANSLATION	nonsense_mediated_decay	-	-	2	552	0	9	0	322.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031095	Cul4b	ENSMUST00000050083	ENSMUSP00000059276	TRANSLATION	protein_coding	-	CCDS40948.1	1	970	0	17.75	1.5	793.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000031095	Cul4b	ENSMUST00000115118	ENSMUSP00000110771	TRANSLATION	protein_coding	-	CCDS40948.1	1	970	0	17.75	1.5	793.2	0	-4,-5	-	-	12	PRINCIPAL:2
ENSMUSG00000035476	Tab3	ENSMUST00000152880	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035476	Tab3	ENSMUST00000137438	ENSMUSP00000117932	TRANSLATION	protein_coding	stop	-	2	108	0	1.4	0	42.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000035476	Tab3	ENSMUST00000048250	ENSMUSP00000039668	TRANSLATION	protein_coding	-	CCDS41049.1	1	716	4	2.4	3.9	42.4	0	-4,-5	-	-	17	PRINCIPAL:1
ENSMUSG00000035476	Tab3	ENSMUST00000146063	ENSMUSP00000120992	TRANSLATION	protein_coding	stop	-	5	38	0	1	0	30.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000118405	Btbd35f30	ENSMUST00000238726	ENSMUSP00000158815	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	41.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000025630	Hprt	ENSMUST00000026723	ENSMUSP00000026723	TRANSLATION	protein_coding	-	CCDS40972.1	1	218	17	5.91	13.3	0	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000031165	Was	ENSMUST00000146029	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031165	Was	ENSMUST00000033505	ENSMUSP00000033505	TRANSLATION	protein_coding	-	CCDS29984.1	1	520	0	5.81	0.5	234.3	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000025862	Stag2	ENSMUST00000127618	ENSMUSP00000119635	TRANSLATION	protein_coding	stop	-	1	40	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025862	Stag2	ENSMUST00000123245	ENSMUSP00000118567	TRANSLATION	protein_coding	stop	-	5	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025862	Stag2	ENSMUST00000069619	ENSMUSP00000063250	TRANSLATION	protein_coding	-	CCDS40952.1	5	1231	0	24.38	7.5	127.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025862	Stag2	ENSMUST00000136323	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025862	Stag2	ENSMUST00000115072	ENSMUSP00000110724	TRANSLATION	protein_coding	-	CCDS40952.1	5	1231	0	24.38	7.5	127.4	0	-4,-5	-	-	15	PRINCIPAL:3
ENSMUSG00000025862	Stag2	ENSMUST00000115073	ENSMUSP00000110725	TRANSLATION	protein_coding	-	CCDS72371.1	5	1268	0	24.38	7.5	127.4	0	-4,-5	-	-	15	ALTERNATIVE:1
ENSMUSG00000025862	Stag2	ENSMUST00000128799	ENSMUSP00000120592	TRANSLATION	protein_coding	stop	-	1	145	0	2.3	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000025862	Stag2	ENSMUST00000141414	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033737	Fndc3c1	ENSMUST00000137507	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033737	Fndc3c1	ENSMUST00000151745	-	NO_TRANSLATION	retained_intron
ENSMUSG00000033737	Fndc3c1	ENSMUST00000127796	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000033737	Fndc3c1	ENSMUST00000039447	ENSMUSP00000038678	TRANSLATION	protein_coding	-	CCDS30342.1	1	1356	0	11.9	0.5	173.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000033737	Fndc3c1	ENSMUST00000149331	ENSMUSP00000121226	TRANSLATION	protein_coding	stop	-	3	96	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000033737	Fndc3c1	ENSMUST00000140707	ENSMUSP00000118896	TRANSLATION	protein_coding	stop	-	3	84	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000033737	Fndc3c1	ENSMUST00000138724	ENSMUSP00000116843	TRANSLATION	protein_coding	stop	-	5	88	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000059401	Mamld1	ENSMUST00000114629	ENSMUSP00000110276	TRANSLATION	protein_coding	-	CCDS57760.1	5	766	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000059401	Mamld1	ENSMUST00000082088	ENSMUSP00000080737	TRANSLATION	protein_coding	-	CCDS57759.1	5	803	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:4
ENSMUSG00000059401	Mamld1	ENSMUST00000239162	ENSMUSP00000159081	TRANSLATION	protein_coding	-	-	-	748	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000071764	Olfr1320	ENSMUST00000214375	ENSMUSP00000149950	TRANSLATION	protein_coding	-	CCDS30116.1	5	319	0	0.2	0.5	163.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071764	Olfr1320	ENSMUST00000096449	ENSMUSP00000094186	TRANSLATION	protein_coding	-	CCDS30116.1	-	319	0	0.2	0.5	163.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071764	Olfr1320	ENSMUST00000214273	ENSMUSP00000150556	TRANSLATION	protein_coding	-	CCDS30116.1	5	319	0	0.2	0.5	163.7	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031209	Heph	ENSMUST00000113838	ENSMUSP00000109469	TRANSLATION	protein_coding	-	CCDS30289.1	1	1157	32	17.27	3.9	137.9	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000031209	Heph	ENSMUST00000135212	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031209	Heph	ENSMUST00000033553	ENSMUSP00000033553	TRANSLATION	protein_coding	-	CCDS30289.1	1	1157	32	17.27	3.9	137.9	1	4,-1	-	-	19	PRINCIPAL:1
ENSMUSG00000031209	Heph	ENSMUST00000079322	ENSMUSP00000078301	TRANSLATION	protein_coding	-	CCDS30290.1	1	847	20	12.47	0.5	53.4	0	4,-1	-	-	0.93	MINOR
ENSMUSG00000031209	Heph	ENSMUST00000154413	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031170	Slc38a5	ENSMUST00000115590	ENSMUSP00000111253	TRANSLATION	protein_coding	-	-	2	471	0	0	1	297.3	10	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000031170	Slc38a5	ENSMUST00000127103	ENSMUSP00000115713	TRANSLATION	protein_coding	stop	-	3	103	0	0	0	51.6	2	-4,-5	-	-	-1	MINOR
ENSMUSG00000031170	Slc38a5	ENSMUST00000033512	ENSMUSP00000033512	TRANSLATION	protein_coding	-	CCDS52990.1	1	479	0	0	1.5	297.3	10	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000031170	Slc38a5	ENSMUST00000115591	ENSMUSP00000111254	TRANSLATION	protein_coding	-	-	5	471	0	0	1	297.3	10	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000067925	Rtl8a	ENSMUST00000088779	ENSMUSP00000086158	TRANSLATION	protein_coding	-	CCDS30134.1	-	113	0	0	3.9	182.9	0	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000096915	Btbd35f6	ENSMUST00000179466	ENSMUSP00000136491	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	38.8	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000035454	Samt3	ENSMUST00000047945	ENSMUSP00000036724	TRANSLATION	protein_coding	-	CCDS30259.1	1	233	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000073130	Gm1141	ENSMUST00000101495	ENSMUSP00000099034	TRANSLATION	protein_coding	-	-	1	475	0	0	0	0	0	-4,-5	-	-	0	MINOR
ENSMUSG00000073130	Gm1141	ENSMUST00000154780	ENSMUSP00000114284	TRANSLATION	protein_coding	-	-	3	758	0	1.888	0	0	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051209	Gpr119	ENSMUST00000053970	ENSMUSP00000060591	TRANSLATION	protein_coding	-	CCDS30113.1	1	335	0	0.48	6.5	115.2	0	-1,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000081607	Gm15294	ENSMUST00000118177	-	NO_TRANSLATION	translated_processed_pseudogene
ENSMUSG00000081607	Gm15294	ENSMUST00000182079	ENSMUSP00000139065	TRANSLATION	protein_coding	-	-	-	121	9	1	0	107.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000025058	5430427O19Rik	ENSMUST00000113976	ENSMUSP00000109609	TRANSLATION	protein_coding	-	CCDS53127.1	1	298	0	0	3.9	348.4	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000083628	Gm2030	ENSMUST00000119590	ENSMUSP00000113055	TRANSLATION	protein_coding	-	CCDS53025.1	5	212	0	1.4	0.5	38.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000043518	Rai2	ENSMUST00000112338	ENSMUSP00000107957	TRANSLATION	protein_coding	-	CCDS30507.1	1	529	0	0	3.9	39.8	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000043518	Rai2	ENSMUST00000061514	ENSMUSP00000051618	TRANSLATION	protein_coding	-	CCDS30507.1	1	529	0	0	3.9	39.8	0	-4,-5	-	-	7	PRINCIPAL:1
ENSMUSG00000094378	Gm15097	ENSMUST00000112741	ENSMUSP00000108361	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	ALTERNATIVE:2
ENSMUSG00000094378	Gm15097	ENSMUST00000101180	ENSMUSP00000098740	TRANSLATION	protein_coding	-	CCDS53216.2	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:2
ENSMUSG00000031065	Cdk16	ENSMUST00000129914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031065	Cdk16	ENSMUST00000115364	ENSMUSP00000111021	TRANSLATION	protein_coding	-	CCDS81103.1	1	461	18	9.5	1.5	237.6	0	-4,-5	-	-	18.188	MINOR
ENSMUSG00000031065	Cdk16	ENSMUST00000122944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031065	Cdk16	ENSMUST00000148757	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031065	Cdk16	ENSMUST00000146259	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031065	Cdk16	ENSMUST00000132365	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031065	Cdk16	ENSMUST00000033380	ENSMUSP00000033380	TRANSLATION	protein_coding	-	CCDS30045.1	1	496	18	9.5	6.3	237.6	0	-4,-6	-	-	20	PRINCIPAL:1
ENSMUSG00000031065	Cdk16	ENSMUST00000125035	-	NO_TRANSLATION	retained_intron
ENSMUSG00000062814	Ssxa1	ENSMUST00000133987	ENSMUSP00000122221	TRANSLATION	protein_coding	stop	-	5	127	0	0	0	56.8	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000062814	Ssxa1	ENSMUST00000072593	ENSMUSP00000072395	TRANSLATION	protein_coding	stop	-	1	127	0	0	0	56.8	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000094876	Btbd35f18	ENSMUST00000105019	ENSMUSP00000100636	TRANSLATION	protein_coding	-	CCDS52972.1	-	498	0	0	0.5	40.2	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000051582	Otud6a	ENSMUST00000060241	ENSMUSP00000059861	TRANSLATION	protein_coding	-	CCDS53146.1	-	290	0	0.2	1.5	88.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000041476	Smpx	ENSMUST00000038007	ENSMUSP00000048522	TRANSLATION	nonsense_mediated_decay	-	-	1	85	0	0	17.3	149.8	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000041476	Smpx	ENSMUST00000190091	ENSMUSP00000140268	TRANSLATION	protein_coding	-	CCDS41190.1	1	85	0	0	17.3	149.8	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041476	Smpx	ENSMUST00000112520	ENSMUSP00000108139	TRANSLATION	protein_coding	-	CCDS41190.1	5	85	0	0	17.3	149.8	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041476	Smpx	ENSMUST00000136141	ENSMUSP00000119573	TRANSLATION	protein_coding	stop	-	3	13	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041476	Smpx	ENSMUST00000126418	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041476	Smpx	ENSMUST00000147283	ENSMUSP00000120412	TRANSLATION	nonsense_mediated_decay	-	-	3	51	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041476	Smpx	ENSMUST00000112521	ENSMUSP00000108140	TRANSLATION	protein_coding	-	CCDS41190.1	1	85	0	0	17.3	149.8	0	-4,-7	-	-	10	PRINCIPAL:1
ENSMUSG00000041476	Smpx	ENSMUST00000132805	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025269	Apex2	ENSMUST00000112725	ENSMUSP00000108345	TRANSLATION	protein_coding	-	-	5	260	6	2.81	0.5	50.1	0	-4,-2	-	-	11.058	MINOR
ENSMUSG00000025269	Apex2	ENSMUST00000140207	ENSMUSP00000122554	TRANSLATION	protein_coding	start/stop	-	3	265	6	2.982	0	49.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025269	Apex2	ENSMUST00000112721	ENSMUSP00000108341	TRANSLATION	protein_coding	-	-	1	523	8	3.628	0	111.8	0	-4,-2	-	-	17.898	ALTERNATIVE:2
ENSMUSG00000025269	Apex2	ENSMUST00000138958	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025269	Apex2	ENSMUST00000026303	ENSMUSP00000026303	TRANSLATION	protein_coding	-	CCDS30463.1	1	516	8	3.43	1.5	113.5	0	-4,-2	-	-	17.604	PRINCIPAL:2
ENSMUSG00000025269	Apex2	ENSMUST00000152332	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025269	Apex2	ENSMUST00000112720	ENSMUSP00000108340	TRANSLATION	protein_coding	-	CCDS30463.1	5	516	8	3.43	1.5	113.5	0	-4,-2	-	-	17.604	PRINCIPAL:2
ENSMUSG00000025269	Apex2	ENSMUST00000124521	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025269	Apex2	ENSMUST00000112727	ENSMUSP00000108347	TRANSLATION	protein_coding	-	-	1	266	6	2.96	0	50.1	0	-4,-2	-	-	11.358	MINOR
ENSMUSG00000025269	Apex2	ENSMUST00000112719	ENSMUSP00000108339	TRANSLATION	protein_coding	-	-	1	246	6	2.61	0	50.3	0	-4,-2	-	-	10.674	MINOR
ENSMUSG00000025043	Dusp21	ENSMUST00000026018	ENSMUSP00000026018	TRANSLATION	protein_coding	-	CCDS30036.1	-	189	8	1	7.5	113.7	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000079579	Gm6760	ENSMUST00000114682	ENSMUSP00000110330	TRANSLATION	protein_coding	-	CCDS53080.1	1	87	0	0	0.5	23.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000095770	Gm21637	ENSMUST00000105124	ENSMUSP00000100756	TRANSLATION	protein_coding	-	CCDS57740.1	-	236	0	1	0.5	216.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000073007	Tent5d	ENSMUST00000101292	ENSMUSP00000098850	TRANSLATION	protein_coding	-	CCDS53172.1	1	390	4	0	5.1	508.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073007	Tent5d	ENSMUST00000144695	ENSMUSP00000119588	TRANSLATION	protein_coding	stop	-	3	29	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000073007	Tent5d	ENSMUST00000167154	ENSMUSP00000129483	TRANSLATION	protein_coding	-	CCDS53172.1	3	390	4	0	5.1	508.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000073007	Tent5d	ENSMUST00000143975	ENSMUSP00000122208	TRANSLATION	protein_coding	stop	-	3	82	1	0	0	85.5	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000062070	Pgk1	ENSMUST00000135949	ENSMUSP00000138706	TRANSLATION	nonsense_mediated_decay	-	-	5	255	17	6.25	0	304.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000062070	Pgk1	ENSMUST00000081593	ENSMUSP00000080302	TRANSLATION	protein_coding	-	CCDS30339.1	1	417	30	9.75	17.3	499.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000062070	Pgk1	ENSMUST00000133559	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094885	Ott	ENSMUST00000177554	ENSMUSP00000137360	TRANSLATION	protein_coding	-	CCDS41167.1	1	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094885	Ott	ENSMUST00000179348	ENSMUSP00000135957	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000094885	Ott	ENSMUST00000177606	ENSMUSP00000136694	TRANSLATION	protein_coding	-	-	5	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000092463	Gm20489	ENSMUST00000117736	ENSMUSP00000112905	TRANSLATION	protein_coding,RT	-	-	5	449	0	3.56	0	138.5	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000036357	Gpr101	ENSMUST00000057645	ENSMUSP00000058183	TRANSLATION	protein_coding	-	CCDS30154.1	1	511	0	0.42	0.5	155.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000055357	4933400A11Rik	ENSMUST00000068894	ENSMUSP00000070781	TRANSLATION	protein_coding	-	-	1	288	0	1	0	313.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055357	4933400A11Rik	ENSMUST00000068874	ENSMUSP00000069798	TRANSLATION	protein_coding	-	-	1	288	0	1	0	313.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000055357	4933400A11Rik	ENSMUST00000112102	ENSMUSP00000107730	TRANSLATION	protein_coding	-	-	1	288	0	1	0	313.5	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031355	Arhgap6	ENSMUST00000112129	ENSMUSP00000107757	TRANSLATION	protein_coding	-	-	1	385	0	2.54	0	132.2	0	-4,-6	-	-	8.922	MINOR
ENSMUSG00000031355	Arhgap6	ENSMUST00000143048	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031355	Arhgap6	ENSMUST00000139146	ENSMUSP00000134512	TRANSLATION	nonsense_mediated_decay	-	-	1	478	0	3.18	0	162.2	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031355	Arhgap6	ENSMUST00000112127	ENSMUSP00000107755	TRANSLATION	protein_coding	-	CCDS72472.1	1	795	0	3.18	0.5	162.2	0	-4,-1	-	-	12	ALTERNATIVE:2
ENSMUSG00000031355	Arhgap6	ENSMUST00000087016	ENSMUSP00000084239	TRANSLATION	protein_coding	-	-	1	294	2	0.7	0	31.6	0	-4,-6	-	-	3.038	MINOR
ENSMUSG00000031355	Arhgap6	ENSMUST00000033721	ENSMUSP00000033721	TRANSLATION	protein_coding	-	CCDS30534.1	2	987	0	3.18	1.5	162.2	0	-2,-5	-	-	12	PRINCIPAL:3
ENSMUSG00000031355	Arhgap6	ENSMUST00000112131	ENSMUSP00000107759	TRANSLATION	protein_coding	-	CCDS41212.1	1	805	0	3.18	1.5	162.2	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000042225	Ammecr1	ENSMUST00000041317	ENSMUSP00000036085	TRANSLATION	protein_coding	-	CCDS30452.1	1	344	0	1.86	0.5	170.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000045010	Gm4779	ENSMUST00000056225	ENSMUSP00000148054	TRANSLATION	protein_coding	start/stop	-	5	224	0	0	0	302.3	0	-3,-6	-	-	-1	MINOR
ENSMUSG00000045010	Gm4779	ENSMUST00000147742	ENSMUSP00000147427	TRANSLATION	protein_coding	-	-	5	561	0	0	0.5	585.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000045010	Gm4779	ENSMUST00000124577	ENSMUSP00000148132	TRANSLATION	nonsense_mediated_decay	start	-	5	209	0	0	0	296.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000073207	Ccdc160	ENSMUST00000101588	ENSMUSP00000099121	TRANSLATION	protein_coding	-	CCDS30126.1	1	323	0	0	3.9	0	0	-4,-5	-	-	1	PRINCIPAL:1
ENSMUSG00000045103	Dmd	ENSMUST00000239269	ENSMUSP00000159246	TRANSLATION	protein_coding	-	-	-	2332	4	8.82	1	760.8	0	-4,-7	-	-	4	MINOR
ENSMUSG00000045103	Dmd	ENSMUST00000139998	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045103	Dmd	ENSMUST00000239019	ENSMUSP00000158938	TRANSLATION	protein_coding	-	-	-	525	4	6.05	0	344.5	0	-4,-5	-	-	4	MINOR
ENSMUSG00000045103	Dmd	ENSMUST00000123308	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045103	Dmd	ENSMUST00000146331	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000149433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000127295	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000147740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000114000	ENSMUSP00000109633	TRANSLATION	protein_coding	-	CCDS41047.1	1	3678	4	18.25	3.9	1208.5	0	-4,-5	-	-	17.116	PRINCIPAL:1
ENSMUSG00000045103	Dmd	ENSMUST00000141261	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045103	Dmd	ENSMUST00000113991	ENSMUSP00000109624	TRANSLATION	protein_coding	-	CCDS85787.1	1	617	4	6.05	8.8	365.8	0	-4,-5	-	-	7	MINOR
ENSMUSG00000045103	Dmd	ENSMUST00000113992	ENSMUSP00000109625	TRANSLATION	protein_coding	-	CCDS85788.1	1	604	4	6.05	7.5	344.5	0	-4,-5	-	-	6.499	MINOR
ENSMUSG00000045103	Dmd	ENSMUST00000156107	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000132333	-	NO_TRANSLATION	retained_intron
ENSMUSG00000045103	Dmd	ENSMUST00000128983	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031400	G6pdx	ENSMUST00000143521	ENSMUSP00000115915	TRANSLATION	protein_coding	stop	-	5	396	25	8.5	0	472.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031400	G6pdx	ENSMUST00000135894	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031400	G6pdx	ENSMUST00000155963	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031400	G6pdx	ENSMUST00000004327	ENSMUSP00000004327	TRANSLATION	protein_coding	-	CCDS30232.1	1	515	37	12	6.4	596.6	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000055780	Usp26	ENSMUST00000069509	ENSMUSP00000069140	TRANSLATION	protein_coding	-	CCDS30122.1	1	835	4	0	0.5	266	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000055780	Usp26	ENSMUST00000114869	ENSMUSP00000110519	TRANSLATION	protein_coding	-	CCDS30122.1	1	835	4	0	0.5	266	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031158	Timm17b	ENSMUST00000033498	ENSMUSP00000033498	TRANSLATION	protein_coding	-	CCDS29978.1	1	172	0	0	16.3	99.6	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000031158	Timm17b	ENSMUST00000150541	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031158	Timm17b	ENSMUST00000146406	ENSMUSP00000117340	TRANSLATION	protein_coding	start/stop	-	3	146	0	0	0	99.6	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031089	Slc6a14	ENSMUST00000033414	ENSMUSP00000033414	TRANSLATION	protein_coding	-	CCDS30051.1	1	638	0	9.2	6.3	651.4	0	-4,-7	-	-	14	PRINCIPAL:1
ENSMUSG00000023070	Rgn	ENSMUST00000023832	ENSMUSP00000023832	TRANSLATION	protein_coding	-	CCDS30043.1	1	299	5	5.5	7.5	260.5	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000019087	Atp6ap1	ENSMUST00000019231	ENSMUSP00000019231	TRANSLATION	protein_coding	-	CCDS30226.1	1	463	0	0	1.5	180.6	0	1,-4	-	-	6	PRINCIPAL:1
ENSMUSG00000019087	Atp6ap1	ENSMUST00000144506	-	NO_TRANSLATION	retained_intron
ENSMUSG00000019087	Atp6ap1	ENSMUST00000124797	ENSMUSP00000118722	TRANSLATION	nonsense_mediated_decay	start	-	5	101	0	0	0	0	0	2,-2	-	-	-1	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000136056	ENSMUSP00000117604	TRANSLATION	nonsense_mediated_decay	start	-	3	68	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000154630	ENSMUSP00000116432	TRANSLATION	protein_coding	start	-	3	54	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000144075	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000019087	Atp6ap1	ENSMUST00000147900	ENSMUSP00000117006	TRANSLATION	protein_coding	stop	-	5	224	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000147275	ENSMUSP00000116162	TRANSLATION	protein_coding	stop	-	5	272	0	0	0	0	0	1,-4	-	-	-1	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000114171	ENSMUSP00000109808	TRANSLATION	protein_coding	-	-	1	415	0	0	0	50.6	0	1,-4	-	-	0	MINOR
ENSMUSG00000019087	Atp6ap1	ENSMUST00000135914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031378	Abcd1	ENSMUST00000114461	ENSMUSP00000110105	TRANSLATION	protein_coding	-	-	1	504	2	0.48	0	338.2	4	-4,-1	-	-	3.294	MINOR
ENSMUSG00000031378	Abcd1	ENSMUST00000002084	ENSMUSP00000002084	TRANSLATION	protein_coding	-	CCDS30210.1	1	736	10	3.47	1.5	394.7	4	-4,-1	-	-	18	PRINCIPAL:1
ENSMUSG00000046432	Bex3	ENSMUST00000113113	ENSMUSP00000108738	TRANSLATION	protein_coding	-	CCDS30419.1	1	124	0	0	0.5	51.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000046432	Bex3	ENSMUST00000053540	ENSMUSP00000063039	TRANSLATION	protein_coding	-	CCDS30419.1	1	124	0	0	0.5	51.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000046432	Bex3	ENSMUST00000113112	ENSMUSP00000108737	TRANSLATION	protein_coding	-	CCDS53194.1	1	114	0	0	0.5	47.8	0	-4,-5	-	-	5.592	ALTERNATIVE:2
ENSMUSG00000046432	Bex3	ENSMUST00000178632	ENSMUSP00000136952	TRANSLATION	protein_coding	-	CCDS30419.1	2	124	0	0	0.5	51.3	0	-4,-5	-	-	6	PRINCIPAL:3
ENSMUSG00000041380	Htr2c	ENSMUST00000131999	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041380	Htr2c	ENSMUST00000036303	ENSMUSP00000043936	TRANSLATION	protein_coding	-	CCDS30459.1	1	459	6	3.8	3.9	223.4	9	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000041380	Htr2c	ENSMUST00000096299	ENSMUSP00000094021	TRANSLATION	protein_coding	-	CCDS30459.1	1	459	6	3.8	3.9	223.4	9	0,-3	-	-	19	PRINCIPAL:1
ENSMUSG00000041380	Htr2c	ENSMUST00000156697	ENSMUSP00000138772	TRANSLATION	protein_coding	-	-	5	172	4	2.24	0	92.4	6	0,-3	-	-	6.882	MINOR
ENSMUSG00000041380	Htr2c	ENSMUST00000149260	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041380	Htr2c	ENSMUST00000112831	ENSMUSP00000108450	TRANSLATION	protein_coding	-	-	3	173	4	2.3	0	92.4	6	0,-3	-	-	7.002	MINOR
ENSMUSG00000041380	Htr2c	ENSMUST00000134368	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079316	Rab9	ENSMUST00000049435	ENSMUSP00000045127	TRANSLATION	protein_coding	stop	-	3	202	24	2	0	195.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000079316	Rab9	ENSMUST00000112091	ENSMUSP00000123325	TRANSLATION	protein_coding	-	CCDS30527.1	1	201	24	2.5	17	195.3	0	-4,-7	-	-	22	PRINCIPAL:1
ENSMUSG00000079316	Rab9	ENSMUST00000149315	ENSMUSP00000119240	TRANSLATION	protein_coding	stop	-	5	59	13	1	0	55.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031182	4930447F04Rik	ENSMUST00000033525	ENSMUSP00000033525	TRANSLATION	protein_coding	-	-	1	126	0	0	0	0	0	-4,-2	-	-	0	PRINCIPAL:1
ENSMUSG00000095621	Gm15085	ENSMUST00000178169	ENSMUSP00000137569	TRANSLATION	protein_coding	-	CCDS53215.1	1	449	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000001962	Fam50a	ENSMUST00000138242	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001962	Fam50a	ENSMUST00000149312	-	NO_TRANSLATION	retained_intron
ENSMUSG00000001962	Fam50a	ENSMUST00000114160	ENSMUSP00000109797	TRANSLATION	protein_coding	-	CCDS41021.1	1	339	0	0	11.3	289.8	0	-4,-6	-	-	9	PRINCIPAL:1
ENSMUSG00000067768	Xlr4b	ENSMUST00000069077	ENSMUSP00000064686	TRANSLATION	protein_coding	-	CCDS41010.1	1	215	0	2.42	1.5	129.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067768	Xlr4b	ENSMUST00000156188	ENSMUSP00000116105	TRANSLATION	protein_coding	stop	-	3	192	0	2	0	129.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067768	Xlr4b	ENSMUST00000081827	ENSMUSP00000080511	TRANSLATION	protein_coding	-	CCDS41010.1	5	215	0	2.42	1.5	129.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067768	Xlr4b	ENSMUST00000114506	ENSMUSP00000110151	TRANSLATION	protein_coding	stop	-	3	160	0	2	0	110.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000067768	Xlr4b	ENSMUST00000124904	-	NO_TRANSLATION	retained_intron
ENSMUSG00000067768	Xlr4b	ENSMUST00000069103	ENSMUSP00000066171	TRANSLATION	protein_coding	-	CCDS41010.1	2	215	0	2.42	1.5	129.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067768	Xlr4b	ENSMUST00000142237	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067768	Xlr4b	ENSMUST00000127701	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031399	Fam3a	ENSMUST00000114143	ENSMUSP00000109779	TRANSLATION	protein_coding	-	CCDS41022.1	1	230	0	3.618	10.1	91.2	2	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031399	Fam3a	ENSMUST00000114138	ENSMUSP00000109774	TRANSLATION	protein_coding	-	-	5	142	0	2.098	0	0	2	-1,-5	-	-	2.958	MINOR
ENSMUSG00000031399	Fam3a	ENSMUST00000122894	ENSMUSP00000114748	TRANSLATION	protein_coding	stop	-	3	199	0	3.058	0	91.2	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000031399	Fam3a	ENSMUST00000141604	ENSMUSP00000120127	TRANSLATION	nonsense_mediated_decay	-	-	3	52	0	0.198	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000031399	Fam3a	ENSMUST00000015427	ENSMUSP00000015427	TRANSLATION	protein_coding	-	CCDS41022.1	5	230	0	3.618	10.1	91.2	2	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031399	Fam3a	ENSMUST00000114139	ENSMUSP00000109775	TRANSLATION	protein_coding	-	-	5	192	0	3.618	1.2	91.2	0	-4,-6	-	-	12.066	MINOR
ENSMUSG00000031399	Fam3a	ENSMUST00000114141	ENSMUSP00000109777	TRANSLATION	protein_coding	-	-	5	237	0	3.453	1.2	84.6	2	-1,-5	-	-	11.304	MINOR
ENSMUSG00000031399	Fam3a	ENSMUST00000114142	ENSMUSP00000109778	TRANSLATION	protein_coding	-	CCDS41022.1	5	230	0	3.618	10.1	91.2	2	-1,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031399	Fam3a	ENSMUST00000136716	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031399	Fam3a	ENSMUST00000149218	ENSMUSP00000121662	TRANSLATION	nonsense_mediated_decay	-	-	5	53	0	0.198	0	0	2	-1,-5	-	-	-1	MINOR
ENSMUSG00000025151	Maged1	ENSMUST00000026142	ENSMUSP00000026142	TRANSLATION	protein_coding	-	CCDS30280.1	1	775	0	5.15	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025151	Maged1	ENSMUST00000153386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025151	Maged1	ENSMUST00000141702	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025151	Maged1	ENSMUST00000133982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025151	Maged1	ENSMUST00000139375	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025151	Maged1	ENSMUST00000138146	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025151	Maged1	ENSMUST00000138731	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031198	Fundc2	ENSMUST00000147998	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031198	Fundc2	ENSMUST00000033541	ENSMUSP00000033541	TRANSLATION	protein_coding	-	CCDS30239.1	1	151	0	0	1.5	97.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031198	Fundc2	ENSMUST00000123540	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025040	Fundc1	ENSMUST00000026016	ENSMUSP00000026016	TRANSLATION	protein_coding	-	CCDS30035.1	1	155	0	0	10.8	101.7	2	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000025040	Fundc1	ENSMUST00000177213	ENSMUSP00000134878	TRANSLATION	protein_coding	-	CCDS85749.1	1	112	0	0	0.5	101.7	2	-4,-7	-	-	6	MINOR
ENSMUSG00000025040	Fundc1	ENSMUST00000142638	ENSMUSP00000135026	TRANSLATION	protein_coding	-	CCDS85749.1	3	112	0	0	0.5	101.7	2	-4,-7	-	-	6	MINOR
ENSMUSG00000025040	Fundc1	ENSMUST00000127690	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025040	Fundc1	ENSMUST00000176638	ENSMUSP00000135183	TRANSLATION	protein_coding	-	CCDS85750.1	3	112	0	0	0.5	37.2	1	-4,-5	-	-	2.13	MINOR
ENSMUSG00000025056	Nr0b1	ENSMUST00000026036	ENSMUSP00000026036	TRANSLATION	protein_coding	-	CCDS30260.1	1	472	0	2	1.5	376.8	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031256	Cstf2	ENSMUST00000148080	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031256	Cstf2	ENSMUST00000033609	ENSMUSP00000033609	TRANSLATION	protein_coding	-	CCDS30389.1	1	580	0	4.3	4.1	264.8	0	-4,-7	-	-	13	PRINCIPAL:3
ENSMUSG00000031256	Cstf2	ENSMUST00000156778	ENSMUSP00000117592	TRANSLATION	protein_coding	start/stop	-	5	259	0	0	0	40.6	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031256	Cstf2	ENSMUST00000136510	ENSMUSP00000117806	TRANSLATION	protein_coding	start/stop	-	3	191	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031256	Cstf2	ENSMUST00000149658	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031256	Cstf2	ENSMUST00000113286	ENSMUSP00000108911	TRANSLATION	protein_coding	-	CCDS81170.1	1	510	0	2.9	0.5	197.2	0	-4,-7	-	-	5.142	MINOR
ENSMUSG00000031256	Cstf2	ENSMUST00000113287	ENSMUSP00000108912	TRANSLATION	protein_coding	-	CCDS72430.1	1	554	0	4.3	0.5	264.8	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000031256	Cstf2	ENSMUST00000144483	ENSMUSP00000114837	TRANSLATION	protein_coding	start/stop	-	3	184	0	1.904	0	152	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000043715	Olfr1326-ps1	ENSMUST00000059880	ENSMUSP00000056853	TRANSLATION	protein_coding	-	-	5	311	0	0.28	1	159.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079630	Rhox4f	ENSMUST00000115170	ENSMUSP00000110824	TRANSLATION	protein_coding	-	CCDS40938.1	1	205	0	1.1	0.5	40.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000079630	Rhox4f	ENSMUST00000183974	-	NO_TRANSLATION	retained_intron
ENSMUSG00000047757	Fancb	ENSMUST00000057150	ENSMUSP00000051402	TRANSLATION	protein_coding	-	-	5	706	0	0	0.5	0	0	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000047757	Fancb	ENSMUST00000167446	ENSMUSP00000128141	TRANSLATION	protein_coding	-	CCDS53242.1	1	853	0	0	0.5	0	0	-4,-6	-	-	0	PRINCIPAL:2
ENSMUSG00000031174	Rpgr	ENSMUST00000115534	ENSMUSP00000111196	TRANSLATION	protein_coding	-	CCDS53000.1	1	651	0	7.1	0.5	219.1	0	-4,-6	-	-	9.252	MINOR
ENSMUSG00000031174	Rpgr	ENSMUST00000044598	ENSMUSP00000037358	TRANSLATION	protein_coding	-	CCDS53001.1	1	1039	0	8.3	0.5	224.9	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000031174	Rpgr	ENSMUST00000115533	ENSMUSP00000111195	TRANSLATION	protein_coding	-	-	1	681	0	8.3	0	224.9	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000031174	Rpgr	ENSMUST00000072393	ENSMUSP00000072229	TRANSLATION	protein_coding	-	-	2	680	0	8.3	0	224.9	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000031174	Rpgr	ENSMUST00000143532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031174	Rpgr	ENSMUST00000155734	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031174	Rpgr	ENSMUST00000073392	ENSMUSP00000073106	TRANSLATION	protein_coding	-	CCDS30014.1	1	746	0	8.3	0.5	224.9	0	-4,0	-	-	12	PRINCIPAL:3
ENSMUSG00000031174	Rpgr	ENSMUST00000115532	ENSMUSP00000111194	TRANSLATION	protein_coding	-	CCDS53002.1	1	972	0	8.3	0.5	224.9	0	-4,0	-	-	12	ALTERNATIVE:2
ENSMUSG00000031174	Rpgr	ENSMUST00000124744	-	NO_TRANSLATION	retained_intron
ENSMUSG00000091863	Cldn34a	ENSMUST00000164764	ENSMUSP00000128513	TRANSLATION	protein_coding	-	CCDS53225.1	-	211	0	0.24	1.5	0	3	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000091863	Cldn34a	ENSMUST00000238455	ENSMUSP00000158756	TRANSLATION	protein_coding	-	CCDS53225.1	-	211	0	0.24	1.5	0	3	-4,-2	-	-	6	PRINCIPAL:1
ENSMUSG00000071771	Rhox4b	ENSMUST00000122828	-	NO_TRANSLATION	retained_intron
ENSMUSG00000071771	Rhox4b	ENSMUST00000096458	ENSMUSP00000094197	TRANSLATION	protein_coding	-	CCDS30077.1	1	205	0	1.1	0.5	40.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000025257	Ribc1	ENSMUST00000026288	ENSMUSP00000026288	TRANSLATION	protein_coding	-	CCDS30472.1	1	379	0	0	1.5	440.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025257	Ribc1	ENSMUST00000133517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000049176	Frmpd4	ENSMUST00000112147	ENSMUSP00000107775	TRANSLATION	nonsense_mediated_decay	-	-	1	37	0	0.32	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000049176	Frmpd4	ENSMUST00000112149	ENSMUSP00000107777	TRANSLATION	protein_coding	-	-	5	1320	0	7.42	3.4	101.5	0	-4,-7	-	-	12.358	ALTERNATIVE:2
ENSMUSG00000049176	Frmpd4	ENSMUST00000239138	ENSMUSP00000159190	TRANSLATION	protein_coding	-	CCDS41210.1	-	1312	0	7.42	0.5	101.5	0	-4,-7	-	-	11.358	PRINCIPAL:2
ENSMUSG00000049176	Frmpd4	ENSMUST00000238709	ENSMUSP00000158713	TRANSLATION	protein_coding	-	-	-	1778	0	7.74	1.7	101.5	0	-4,-5	-	-	12.292	ALTERNATIVE:2
ENSMUSG00000049176	Frmpd4	ENSMUST00000112145	ENSMUSP00000107773	TRANSLATION	protein_coding	-	CCDS41210.1	1	1312	0	7.42	0.5	101.5	0	-4,-7	-	-	11.358	PRINCIPAL:2
ENSMUSG00000049176	Frmpd4	ENSMUST00000112146	ENSMUSP00000107774	TRANSLATION	protein_coding	-	-	1	1760	0	7.42	2.9	101.5	0	-4,-7	-	-	12.15	ALTERNATIVE:2
ENSMUSG00000049176	Frmpd4	ENSMUST00000238211	ENSMUSP00000158917	TRANSLATION	protein_coding	-	CCDS72470.1	-	1280	0	6.82	0.5	101.5	0	-4,-5	-	-	10.158	MINOR
ENSMUSG00000031161	Hdac6	ENSMUST00000033501	ENSMUSP00000033501	TRANSLATION	protein_coding	-	CCDS40845.1	5	1149	6	22.05	1.5	615	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031161	Hdac6	ENSMUST00000133349	ENSMUSP00000120348	TRANSLATION	protein_coding	stop	-	3	197	0	4.7	0	32.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031161	Hdac6	ENSMUST00000156127	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031161	Hdac6	ENSMUST00000145675	ENSMUSP00000121653	TRANSLATION	protein_coding	stop	-	1	1008	6	19.3	0	563.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031161	Hdac6	ENSMUST00000153788	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031161	Hdac6	ENSMUST00000137499	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031161	Hdac6	ENSMUST00000154200	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031161	Hdac6	ENSMUST00000151916	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031161	Hdac6	ENSMUST00000115642	ENSMUSP00000111306	TRANSLATION	protein_coding	-	CCDS40845.1	1	1149	6	22.05	1.5	615	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000031161	Hdac6	ENSMUST00000154244	ENSMUSP00000123482	TRANSLATION	protein_coding	stop	-	3	41	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000035246	Pcyt1b	ENSMUST00000045898	ENSMUSP00000044280	TRANSLATION	protein_coding	-	CCDS30274.1	1	369	8	5.75	10.8	110.8	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000035246	Pcyt1b	ENSMUST00000146263	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035246	Pcyt1b	ENSMUST00000113933	ENSMUSP00000109566	TRANSLATION	protein_coding	-	CCDS41061.1	1	339	8	5.75	0.5	110.8	0	-4,-5	-	-	18	MINOR
ENSMUSG00000046269	Usp27x	ENSMUST00000178293	ENSMUSP00000137509	TRANSLATION	nonsense_mediated_decay	-	-	2	438	15	0.36	2.9	187.6	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000046269	Usp27x	ENSMUST00000191497	ENSMUSP00000139402	TRANSLATION	protein_coding	-	CCDS52983.1	2	438	15	0.36	2.9	187.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046269	Usp27x	ENSMUST00000115744	ENSMUSP00000111409	TRANSLATION	protein_coding	-	CCDS52983.1	-	438	15	0.36	2.9	187.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000079522	Gm14744	ENSMUST00000114039	ENSMUSP00000109673	TRANSLATION	protein_coding	-	CCDS41037.1	1	173	0	4.35	0.5	85.4	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000163810	ENSMUSP00000128176	TRANSLATION	protein_coding	-	CCDS41215.1	5	680	9	8.11	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000112105	ENSMUSP00000107733	TRANSLATION	protein_coding	-	CCDS41215.1	5	680	9	8.11	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000078947	ENSMUSP00000077974	TRANSLATION	protein_coding	-	-	5	642	9	7.11	0.5	161.7	0	-4,-6	-	-	13.806	MINOR
ENSMUSG00000035299	Mid1	ENSMUST00000171433	ENSMUSP00000126746	TRANSLATION	protein_coding	-	CCDS41215.1	5	680	9	8.11	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000079443	ENSMUSP00000078412	TRANSLATION	protein_coding	-	-	5	400	0	5.16	0.5	133.1	0	1,-2	-	-	2.19	MINOR
ENSMUSG00000035299	Mid1	ENSMUST00000146073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000129642	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000152163	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000112107	ENSMUSP00000107735	TRANSLATION	protein_coding	-	-	5	474	0	6.11	0	128.1	0	-4,-5	-	-	3.786	MINOR
ENSMUSG00000035299	Mid1	ENSMUST00000112104	ENSMUSP00000107732	TRANSLATION	protein_coding	-	CCDS41215.1	5	680	9	8.11	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000036753	ENSMUSP00000038765	TRANSLATION	protein_coding	-	CCDS41215.1	5	680	9	8.11	0.5	198.3	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000035299	Mid1	ENSMUST00000133857	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000143815	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000151722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000035299	Mid1	ENSMUST00000149258	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042433	Pih1h3b	ENSMUST00000044806	ENSMUSP00000048754	TRANSLATION	protein_coding	-	CCDS30438.1	1	218	0	0	1.5	23.8	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031104	Rab33a	ENSMUST00000033430	ENSMUSP00000033430	TRANSLATION	protein_coding	-	CCDS30110.1	1	237	22	2	7.5	170.7	0	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000047344	Lancl3	ENSMUST00000069763	ENSMUSP00000064516	TRANSLATION	protein_coding	-	CCDS30007.1	1	420	9	3.66	7.6	241.1	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025283	Sat1	ENSMUST00000134855	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025283	Sat1	ENSMUST00000026318	ENSMUSP00000026318	TRANSLATION	protein_coding	-	CCDS30495.1	1	171	20	4.5	16.1	57.5	0	-4,-6	-	-	22	PRINCIPAL:1
ENSMUSG00000025283	Sat1	ENSMUST00000138944	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025283	Sat1	ENSMUST00000150046	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025283	Sat1	ENSMUST00000112551	ENSMUSP00000108170	TRANSLATION	protein_coding	-	-	2	178	20	4.335	0	40.9	0	-4,-6	-	-	15.936	MINOR
ENSMUSG00000025283	Sat1	ENSMUST00000123337	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025283	Sat1	ENSMUST00000152463	ENSMUSP00000138776	TRANSLATION	nonsense_mediated_decay	-	-	5	71	0	2	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000051224	Tceanc	ENSMUST00000112187	ENSMUSP00000107805	TRANSLATION	protein_coding	stop	-	3	35	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051224	Tceanc	ENSMUST00000180322	ENSMUSP00000136691	TRANSLATION	protein_coding	-	CCDS53249.1	-	359	4	0.48	1.5	128.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000051224	Tceanc	ENSMUST00000112188	ENSMUSP00000107806	TRANSLATION	protein_coding	-	CCDS53249.1	1	359	4	0.48	1.5	128.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000071726	Gm5941	ENSMUST00000096371	ENSMUSP00000094099	TRANSLATION	protein_coding	-	-	1	117	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000031312	Itgb1bp2	ENSMUST00000143946	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031312	Itgb1bp2	ENSMUST00000033674	ENSMUSP00000033674	TRANSLATION	protein_coding	-	CCDS41079.1	1	350	16	3.43	2.7	227.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000035725	Prkx	ENSMUST00000114044	ENSMUSP00000109678	TRANSLATION	protein_coding	-	-	1	237	18	3.64	0	203.7	0	-4,-5	-	-	10.464	MINOR
ENSMUSG00000035725	Prkx	ENSMUST00000036333	ENSMUSP00000045304	TRANSLATION	protein_coding	-	CCDS30248.1	1	355	18	6.69	1.5	229.3	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000046449	Nexmif	ENSMUST00000118314	ENSMUSP00000113625	TRANSLATION	protein_coding	-	-	1	1485	0	0	0	386.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000046449	Nexmif	ENSMUST00000056502	ENSMUSP00000049716	TRANSLATION	protein_coding	-	-	1	1485	0	0	0	386.1	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000046449	Nexmif	ENSMUST00000087879	ENSMUSP00000085187	TRANSLATION	protein_coding	-	CCDS53166.1	1	1515	0	0	1.5	386.1	0	-4,-5	-	-	6	PRINCIPAL:2
ENSMUSG00000058254	Tspan7	ENSMUST00000115526	ENSMUSP00000111188	TRANSLATION	protein_coding	-	-	1	230	0	2.15	0	163.4	4	-1,-5	-	-	11.256	MINOR
ENSMUSG00000058254	Tspan7	ENSMUST00000149982	-	NO_TRANSLATION	retained_intron
ENSMUSG00000058254	Tspan7	ENSMUST00000076354	ENSMUSP00000075692	TRANSLATION	protein_coding	-	CCDS30016.1	1	249	0	2.15	18.5	175.8	5	-1,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000032806	Slc10a3	ENSMUST00000073067	ENSMUSP00000072818	TRANSLATION	protein_coding	-	CCDS30231.1	1	473	0	0.48	2.7	147.5	13	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000032806	Slc10a3	ENSMUST00000114147	ENSMUSP00000109784	TRANSLATION	protein_coding	-	-	5	444	0	0.48	0	147.5	13	-4,-2	-	-	12	ALTERNATIVE:2
ENSMUSG00000032806	Slc10a3	ENSMUST00000037967	ENSMUSP00000045150	TRANSLATION	protein_coding	-	CCDS30231.1	1	473	0	0.48	2.7	147.5	13	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000032806	Slc10a3	ENSMUST00000114146	ENSMUSP00000109783	TRANSLATION	protein_coding	-	CCDS30231.1	5	473	0	0.48	2.7	147.5	13	-4,-2	-	-	12	PRINCIPAL:2
ENSMUSG00000098078	Gm26992	ENSMUST00000182089	ENSMUSP00000138142	TRANSLATION	protein_coding,RT	start	-	2	76	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000042473	Tbc1d8b	ENSMUST00000123430	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042473	Tbc1d8b	ENSMUST00000096313	ENSMUSP00000094036	TRANSLATION	protein_coding	-	CCDS41146.1	1	1114	4	5.08	1.5	265.8	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031402	Mpp1	ENSMUST00000155742	ENSMUSP00000116401	TRANSLATION	protein_coding	stop	-	5	130	0	2.23	0	66.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031402	Mpp1	ENSMUST00000156975	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031402	Mpp1	ENSMUST00000033775	ENSMUSP00000033775	TRANSLATION	protein_coding	-	CCDS30236.1	1	466	20	9.49	1.7	358.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000031402	Mpp1	ENSMUST00000127023	ENSMUSP00000117003	TRANSLATION	nonsense_mediated_decay	-	-	3	45	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031402	Mpp1	ENSMUST00000153318	ENSMUSP00000116897	TRANSLATION	protein_coding	stop	-	5	156	0	3.08	0	72.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031402	Mpp1	ENSMUST00000132935	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031402	Mpp1	ENSMUST00000114092	ENSMUSP00000109726	TRANSLATION	protein_coding	-	-	5	446	20	8.74	0	316.8	0	-4,-5	-	-	13.998	MINOR
ENSMUSG00000031402	Mpp1	ENSMUST00000114091	ENSMUSP00000109725	TRANSLATION	protein_coding	-	-	2	452	20	8.49	0	318.7	0	-4,-5	-	-	13.614	MINOR
ENSMUSG00000031402	Mpp1	ENSMUST00000135285	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031402	Mpp1	ENSMUST00000132501	ENSMUSP00000118693	TRANSLATION	protein_coding	stop	-	5	205	9	4.01	0	129.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056679	Gpr173	ENSMUST00000070316	ENSMUSP00000065533	TRANSLATION	protein_coding	-	CCDS30475.1	1	373	0	0.36	9.5	104.1	0	-4,-7	-	-	15	PRINCIPAL:1
ENSMUSG00000056679	Gpr173	ENSMUST00000137840	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000042271	Nxt2	ENSMUST00000042329	ENSMUSP00000048221	TRANSLATION	protein_coding	-	CCDS41155.1	2	142	0	3.08	19.5	103.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042271	Nxt2	ENSMUST00000112916	ENSMUSP00000108538	TRANSLATION	protein_coding	-	CCDS72440.1	3	198	0	3.08	1.5	103.1	0	-4,-6	-	-	12.108	MINOR
ENSMUSG00000042271	Nxt2	ENSMUST00000138877	-	NO_TRANSLATION	retained_intron
ENSMUSG00000042271	Nxt2	ENSMUST00000112914	ENSMUSP00000108536	TRANSLATION	protein_coding	-	CCDS41155.1	1	142	0	3.08	19.5	103.1	0	-4,-5	-	-	16	PRINCIPAL:1
ENSMUSG00000042271	Nxt2	ENSMUST00000112913	ENSMUSP00000108535	TRANSLATION	protein_coding	-	CCDS72441.1	3	114	0	2.33	4.1	85.2	0	-4,-7	-	-	10.098	MINOR
ENSMUSG00000099711	Btbd35f21	ENSMUST00000105017	ENSMUSP00000100634	TRANSLATION	protein_coding	-	CCDS57742.1	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031125	3830403N18Rik	ENSMUST00000033458	ENSMUSP00000033458	TRANSLATION	protein_coding	-	CCDS30141.1	1	208	0	3.6	0.5	129.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031197	Vbp1	ENSMUST00000033540	ENSMUSP00000033540	TRANSLATION	protein_coding	-	CCDS41032.1	1	196	0	0	6.3	132.1	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031197	Vbp1	ENSMUST00000114070	ENSMUSP00000109704	TRANSLATION	protein_coding	-	-	1	130	0	0	0	57.5	0	-4,-5	-	-	1.524	MINOR
ENSMUSG00000031197	Vbp1	ENSMUST00000123419	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039382	Wdr45	ENSMUST00000115688	ENSMUSP00000111352	TRANSLATION	protein_coding	-	CCDS72331.1	1	346	0	5.083	0.5	0	0	-4,-6	-	-	5.34	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208517	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039382	Wdr45	ENSMUST00000137470	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039382	Wdr45	ENSMUST00000154253	ENSMUSP00000138122	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	1.475	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208072	ENSMUSP00000146607	TRANSLATION	protein_coding	stop	-	5	136	0	2.375	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000131077	ENSMUSP00000117784	TRANSLATION	protein_coding	stop	-	5	146	0	2.573	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000209144	ENSMUSP00000147208	TRANSLATION	nonsense_mediated_decay	-	-	5	56	0	0.975	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208524	ENSMUSP00000146911	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0.875	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000115689	ENSMUSP00000111353	TRANSLATION	protein_coding	-	CCDS29970.1	1	360	0	5.413	13.3	18.8	0	-4,-6	-	-	12.628	PRINCIPAL:1
ENSMUSG00000039382	Wdr45	ENSMUST00000207589	ENSMUSP00000147232	TRANSLATION	protein_coding	stop	-	5	293	0	5.213	0	18.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000116633	ENSMUSP00000112332	TRANSLATION	protein_coding	stop	-	5	224	0	3.813	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208918	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039382	Wdr45	ENSMUST00000208553	ENSMUSP00000146660	TRANSLATION	nonsense_mediated_decay	-	-	5	83	0	1.475	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000209077	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039382	Wdr45	ENSMUST00000148624	ENSMUSP00000122086	TRANSLATION	protein_coding	stop	-	5	145	0	2.573	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000209143	ENSMUSP00000147106	TRANSLATION	nonsense_mediated_decay	-	-	5	136	0	1.475	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208719	ENSMUSP00000147254	TRANSLATION	protein_coding	start	-	5	122	0	2.53	0	18.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000144148	ENSMUSP00000116483	TRANSLATION	protein_coding	stop	-	5	110	0	2.075	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208618	ENSMUSP00000146354	TRANSLATION	protein_coding	stop	-	5	318	0	4.813	1.2	24.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208528	ENSMUSP00000146453	TRANSLATION	protein_coding	stop	-	5	130	0	2.063	0	24.1	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000155914	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039382	Wdr45	ENSMUST00000115687	ENSMUSP00000111351	TRANSLATION	protein_coding	-	CCDS29970.1	1	360	0	5.413	13.3	18.8	0	-4,-6	-	-	12.628	PRINCIPAL:1
ENSMUSG00000039382	Wdr45	ENSMUST00000116634	ENSMUSP00000112333	TRANSLATION	protein_coding	-	-	5	325	0	4.813	3.2	42.9	0	-4,-6	-	-	11.516	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000127847	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039382	Wdr45	ENSMUST00000207183	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000039382	Wdr45	ENSMUST00000207109	ENSMUSP00000147110	TRANSLATION	protein_coding	start	-	5	287	0	3.588	0	18.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000043045	ENSMUSP00000041456	TRANSLATION	protein_coding	-	CCDS29970.1	1	360	0	5.413	13.3	18.8	0	-4,-6	-	-	12.628	PRINCIPAL:1
ENSMUSG00000039382	Wdr45	ENSMUST00000156000	ENSMUSP00000121634	TRANSLATION	protein_coding	stop	-	5	145	0	2.573	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000125991	ENSMUSP00000119766	TRANSLATION	protein_coding	stop	-	5	109	0	2.075	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000207337	ENSMUSP00000146506	TRANSLATION	nonsense_mediated_decay	-	-	5	80	0	1.475	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000208443	ENSMUSP00000146886	TRANSLATION	protein_coding	-	-	5	289	0	4.315	0	0	0	-4,-6	-	-	3.804	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000207541	ENSMUSP00000146471	TRANSLATION	protein_coding	stop	-	5	136	0	2.173	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000207386	ENSMUSP00000146707	TRANSLATION	protein_coding	stop	-	5	189	0	3.495	0	18.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000207675	ENSMUSP00000147163	TRANSLATION	protein_coding	-	-	5	293	0	4.315	0	18.8	0	-4,-6	-	-	6.432	MINOR
ENSMUSG00000039382	Wdr45	ENSMUST00000124707	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039382	Wdr45	ENSMUST00000208996	ENSMUSP00000147040	TRANSLATION	protein_coding	stop	-	5	208	0	2.663	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031292	Cdkl5	ENSMUST00000197942	ENSMUSP00000143137	TRANSLATION	nonsense_mediated_decay	-	-	5	862	18	8.08	0	251.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031292	Cdkl5	ENSMUST00000198931	ENSMUSP00000143726	TRANSLATION	protein_coding	-	-	5	960	18	8.08	5.8	251.4	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031292	Cdkl5	ENSMUST00000196297	ENSMUSP00000143057	TRANSLATION	nonsense_mediated_decay	-	-	5	923	18	8.08	0	251.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031292	Cdkl5	ENSMUST00000112355	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031292	Cdkl5	ENSMUST00000199927	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031292	Cdkl5	ENSMUST00000087104	ENSMUSP00000084342	TRANSLATION	protein_coding	-	CCDS53238.1	1	938	18	8.08	0.5	251.4	0	-4,-5	-	-	18	MINOR
ENSMUSG00000031144	Syp	ENSMUST00000137515	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031144	Syp	ENSMUST00000134355	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031144	Syp	ENSMUST00000069520	ENSMUSP00000069429	TRANSLATION	protein_coding	-	CCDS29967.2	1	314	0	0	4.1	150.4	4	-4,-7	-	-	7	PRINCIPAL:1
ENSMUSG00000031144	Syp	ENSMUST00000150572	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031144	Syp	ENSMUST00000149795	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031144	Syp	ENSMUST00000128890	ENSMUSP00000118544	TRANSLATION	protein_coding	start/stop	-	3	165	0	0	0	70.1	2	-4,-6	-	-	-1	MINOR
ENSMUSG00000118431	Btbd35f25	ENSMUST00000238772	ENSMUSP00000158683	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	40.8	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031327	Chic1	ENSMUST00000116547	ENSMUSP00000112246	TRANSLATION	protein_coding	-	CCDS53165.1	1	227	0	0	1.5	38.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031143	Ccdc22	ENSMUST00000144674	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031143	Ccdc22	ENSMUST00000033483	ENSMUSP00000033483	TRANSLATION	protein_coding	-	CCDS29966.1	1	627	0	0	6.3	713.5	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000031258	Xkrx	ENSMUST00000148722	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031258	Xkrx	ENSMUST00000033611	ENSMUSP00000033611	TRANSLATION	protein_coding	-	CCDS30391.1	1	449	0	0	1.5	227.2	0	-4,-6	-	-	6	PRINCIPAL:1
ENSMUSG00000079521	Gm5938	ENSMUST00000114030	ENSMUSP00000109664	TRANSLATION	protein_coding	-	CCDS41039.1	1	163	0	3.4	0.5	75	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079521	Gm5938	ENSMUST00000126279	-	NO_TRANSLATION	retained_intron
ENSMUSG00000044121	5430402E10Rik	ENSMUST00000063127	ENSMUSP00000052804	TRANSLATION	protein_coding	-	CCDS57766.1	1	173	0	4.35	0.5	85.7	0	2,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031434	Morc4	ENSMUST00000172366	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031434	Morc4	ENSMUST00000165274	ENSMUSP00000126149	TRANSLATION	protein_coding	stop	-	3	104	0	2.75	0	55.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031434	Morc4	ENSMUST00000146914	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031434	Morc4	ENSMUST00000167664	ENSMUSP00000132245	TRANSLATION	protein_coding	start/stop	-	5	218	4	5.05	0	62.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031434	Morc4	ENSMUST00000144481	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031434	Morc4	ENSMUST00000033811	ENSMUSP00000033811	TRANSLATION	protein_coding	-	CCDS53203.1	1	883	4	11.15	1.5	118.9	0	-4,-1	-	-	16	PRINCIPAL:3
ENSMUSG00000031434	Morc4	ENSMUST00000087401	ENSMUSP00000084663	TRANSLATION	protein_coding	-	CCDS57777.1	1	928	4	11.15	1.5	118.9	0	-4,-1	-	-	16	ALTERNATIVE:2
ENSMUSG00000031434	Morc4	ENSMUST00000136415	ENSMUSP00000132730	TRANSLATION	protein_coding	start	-	5	667	4	6.2	0	62.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031434	Morc4	ENSMUST00000171896	ENSMUSP00000126813	TRANSLATION	nonsense_mediated_decay	-	-	5	37	0	0.2	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031434	Morc4	ENSMUST00000113014	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000051579	Tceal8	ENSMUST00000163584	ENSMUSP00000129591	TRANSLATION	protein_coding	-	CCDS30415.1	3	117	0	0	5.1	88	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000051579	Tceal8	ENSMUST00000060101	ENSMUSP00000056189	TRANSLATION	protein_coding	-	CCDS30415.1	1	117	0	0	5.1	88	0	-4,-5	-	-	8	PRINCIPAL:1
ENSMUSG00000051579	Tceal8	ENSMUST00000136533	ENSMUSP00000118747	TRANSLATION	protein_coding	stop	-	2	11	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000051579	Tceal8	ENSMUST00000146583	ENSMUSP00000122143	TRANSLATION	protein_coding	stop	-	3	46	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000079374	Gm8334	ENSMUST00000112755	ENSMUSP00000108375	TRANSLATION	protein_coding	start	-	5	553	0	0	0	0	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000079519	Gm14743	ENSMUST00000114026	ENSMUSP00000109660	TRANSLATION	protein_coding	-	CCDS53119.1	1	171	0	3.55	0.5	72.6	0	4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000033906	Zdhhc15	ENSMUST00000042070	ENSMUSP00000047615	TRANSLATION	protein_coding	-	CCDS30332.1	1	337	8	0	7.6	119.7	0	-2,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000031329	Tsx	ENSMUST00000033691	ENSMUSP00000033691	TRANSLATION	protein_coding	-	CCDS41090.1	1	144	0	0	1.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000036572	Upf3b	ENSMUST00000133481	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000036572	Upf3b	ENSMUST00000130324	ENSMUSP00000121631	TRANSLATION	protein_coding	start/stop	-	3	260	0	0	0	71.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000036572	Upf3b	ENSMUST00000076265	ENSMUSP00000075614	TRANSLATION	protein_coding	-	CCDS30068.1	1	472	0	4.6	1.5	183.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000082639	Gm2012	ENSMUST00000121900	ENSMUSP00000113154	TRANSLATION	protein_coding	-	CCDS53024.1	5	212	0	1.4	0.5	39.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000082639	Gm2012	ENSMUST00000163263	ENSMUSP00000131886	TRANSLATION	protein_coding	-	CCDS53024.1	5	212	0	1.4	0.5	39.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000009596	Taf7l	ENSMUST00000131311	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000009596	Taf7l	ENSMUST00000113223	ENSMUSP00000108849	TRANSLATION	protein_coding	-	-	5	350	0	6.07	0.5	150.7	0	-4,-7	-	-	7.806	MINOR
ENSMUSG00000009596	Taf7l	ENSMUST00000009740	ENSMUSP00000009740	TRANSLATION	protein_coding	-	CCDS53184.1	1	471	0	7.07	0.5	187.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071679	Rtl4	ENSMUST00000112843	ENSMUSP00000108462	TRANSLATION	protein_coding	-	CCDS41158.1	1	304	4	0	1.5	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000071679	Rtl4	ENSMUST00000096301	ENSMUSP00000108463	TRANSLATION	protein_coding	-	CCDS41158.1	-	304	4	0	1.5	0	0	-4,-5	-	-	4	PRINCIPAL:1
ENSMUSG00000062170	Fmr1nb	ENSMUST00000114647	ENSMUSP00000110294	TRANSLATION	protein_coding	-	CCDS53085.1	1	166	0	0	0.5	0	4	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000062170	Fmr1nb	ENSMUST00000069731	ENSMUSP00000064543	TRANSLATION	protein_coding	-	CCDS53084.1	1	192	0	0	0.5	0	4	-4,-6	-	-	0	ALTERNATIVE:2
ENSMUSG00000062170	Fmr1nb	ENSMUST00000071848	ENSMUSP00000071748	TRANSLATION	protein_coding	-	CCDS30172.1	1	238	0	0	0.5	0	4	-4,-6	-	-	0	PRINCIPAL:3
ENSMUSG00000094391	Btbd35f29	ENSMUST00000179532	ENSMUSP00000137428	TRANSLATION	protein_coding	-	-	-	498	0	0	0.5	41.3	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000031337	Mtm1	ENSMUST00000151415	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031337	Mtm1	ENSMUST00000114617	ENSMUSP00000110264	TRANSLATION	protein_coding	-	-	5	603	7	11.75	6.5	570.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031337	Mtm1	ENSMUST00000101501	ENSMUSP00000099040	TRANSLATION	protein_coding	-	CCDS53089.1	1	162	0	3.36	0.5	75.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000031337	Mtm1	ENSMUST00000114621	ENSMUSP00000110268	TRANSLATION	protein_coding	-	-	5	572	7	10.75	0.5	494.9	0	-4,-5	-	-	11.484	MINOR
ENSMUSG00000031337	Mtm1	ENSMUST00000126208	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031337	Mtm1	ENSMUST00000033700	ENSMUSP00000033700	TRANSLATION	protein_coding	-	-	5	603	7	11.75	6.5	570.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031337	Mtm1	ENSMUST00000152810	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031337	Mtm1	ENSMUST00000061970	ENSMUSP00000057182	TRANSLATION	protein_coding	-	CCDS30177.1	1	603	7	11.75	6.5	570.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031337	Mtm1	ENSMUST00000129722	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031337	Mtm1	ENSMUST00000171933	ENSMUSP00000125798	TRANSLATION	protein_coding	-	CCDS30177.1	1	603	7	11.75	6.5	570.2	0	-4,-5	-	-	20	PRINCIPAL:1
ENSMUSG00000031337	Mtm1	ENSMUST00000156452	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031337	Mtm1	ENSMUST00000025391	ENSMUSP00000025391	TRANSLATION	protein_coding	-	CCDS53090.1	1	572	7	10.75	0.5	494.9	0	-4,-5	-	-	11.484	MINOR
ENSMUSG00000031337	Mtm1	ENSMUST00000134859	-	NO_TRANSLATION	retained_intron
ENSMUSG00000051257	Trap1a	ENSMUST00000054534	ENSMUSP00000059448	TRANSLATION	protein_coding	-	CCDS30433.1	1	224	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000018595	Glra4	ENSMUST00000018739	ENSMUSP00000018739	TRANSLATION	protein_coding	-	CCDS53195.1	1	456	8	6.5	6.3	294.1	0	2,-2	-	-	20	PRINCIPAL:1
ENSMUSG00000018595	Glra4	ENSMUST00000154833	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094802	Samt1	ENSMUST00000178342	ENSMUSP00000137062	TRANSLATION	protein_coding	-	CCDS53227.1	2	237	0	0	0.5	0	3	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000094802	Samt1	ENSMUST00000178698	ENSMUSP00000137495	TRANSLATION	protein_coding	-	CCDS53227.1	5	237	0	0	0.5	0	3	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000041353	Tmem29	ENSMUST00000128771	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000155740	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041353	Tmem29	ENSMUST00000148968	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000059256	ENSMUSP00000053632	TRANSLATION	protein_coding	-	CCDS53218.1	1	204	0	0	1.5	215.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041353	Tmem29	ENSMUST00000130339	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000173996	ENSMUSP00000134594	TRANSLATION	protein_coding	-	CCDS53218.1	2	204	0	0	1.5	215.9	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000041353	Tmem29	ENSMUST00000143526	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000134601	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000141948	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000163233	ENSMUSP00000132541	TRANSLATION	protein_coding	-	CCDS53219.1	2	123	0	0	0.5	140.6	0	-4,-5	-	-	1.482	MINOR
ENSMUSG00000041353	Tmem29	ENSMUST00000151067	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000041353	Tmem29	ENSMUST00000127532	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000016409	Nkap	ENSMUST00000152906	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016409	Nkap	ENSMUST00000016553	ENSMUSP00000016553	TRANSLATION	protein_coding	-	CCDS30069.1	1	415	0	0	1.5	198	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000041229	Phf8	ENSMUST00000141715	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041229	Phf8	ENSMUST00000046962	ENSMUSP00000041312	TRANSLATION	protein_coding	-	CCDS30470.1	1	795	22	10.58	0.5	81.9	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000041229	Phf8	ENSMUST00000112668	ENSMUSP00000108287	TRANSLATION	protein_coding	-	-	1	602	22	10.58	0	81.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041229	Phf8	ENSMUST00000112662	ENSMUSP00000108281	TRANSLATION	protein_coding	-	CCDS30470.1	5	795	22	10.58	0.5	81.9	0	-4,-6	-	-	18	PRINCIPAL:3
ENSMUSG00000041229	Phf8	ENSMUST00000138318	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041229	Phf8	ENSMUST00000148622	ENSMUSP00000122974	TRANSLATION	protein_coding	stop	-	3	151	8	3.75	0	37.5	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000041229	Phf8	ENSMUST00000112670	ENSMUSP00000108289	TRANSLATION	protein_coding	-	-	1	820	22	10.58	0	81.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041229	Phf8	ENSMUST00000112666	ENSMUSP00000108285	TRANSLATION	protein_coding	-	-	1	464	22	10.58	0	81.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041229	Phf8	ENSMUST00000151941	ENSMUSP00000116792	TRANSLATION	protein_coding	start	-	3	124	0	2.33	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000041229	Phf8	ENSMUST00000168501	ENSMUSP00000127653	TRANSLATION	protein_coding	-	CCDS53223.1	5	1023	22	10.58	2.7	81.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000041229	Phf8	ENSMUST00000046950	ENSMUSP00000040765	TRANSLATION	protein_coding	-	CCDS53223.1	5	1023	22	10.58	2.7	81.9	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000031147	Magix	ENSMUST00000130287	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031147	Magix	ENSMUST00000115695	ENSMUSP00000111359	TRANSLATION	protein_coding	-	CCDS29968.1	1	324	0	2.14	1.5	50.5	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000079566	Spin2d	ENSMUST00000114517	ENSMUSP00000110162	TRANSLATION	protein_coding	-	CCDS57762.1	1	236	0	1	0.5	218.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000067441	H2ab1	ENSMUST00000122446	ENSMUSP00000138181	TRANSLATION	protein_coding	-	CCDS72425.1	-	115	0	0.8	1.5	0	0	-4,-1	-	-	6	PRINCIPAL:1
ENSMUSG00000078317	F8a	ENSMUST00000105111	ENSMUSP00000100743	TRANSLATION	protein_coding	-	CCDS41011.1	-	381	0	0	0.5	0	0	-3,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000059708	Akap17b	ENSMUST00000133980	ENSMUSP00000123406	TRANSLATION	protein_coding	stop	-	1	406	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000059708	Akap17b	ENSMUST00000051906	ENSMUSP00000052042	TRANSLATION	protein_coding	-	CCDS40924.1	5	959	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031428	Zcchc18	ENSMUST00000113067	ENSMUSP00000108690	TRANSLATION	protein_coding	-	CCDS30427.1	1	393	4	0	1.5	131.4	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000031428	Zcchc18	ENSMUST00000101227	ENSMUSP00000098788	TRANSLATION	protein_coding	-	CCDS30427.1	1	393	4	0	1.5	131.4	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000031428	Zcchc18	ENSMUST00000033804	ENSMUSP00000033804	TRANSLATION	protein_coding	-	CCDS30427.1	1	393	4	0	1.5	131.4	0	-4,0	-	-	10	PRINCIPAL:1
ENSMUSG00000073293	Nudt10	ENSMUST00000103006	ENSMUSP00000100071	TRANSLATION	protein_coding	-	CCDS29957.1	1	164	12	1	9.5	69.4	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000015289	Lage3	ENSMUST00000114153	ENSMUSP00000109790	TRANSLATION	protein_coding	-	-	1	111	0	0	0	26.1	0	-4,-5	-	-	2.508	MINOR
ENSMUSG00000015289	Lage3	ENSMUST00000015433	ENSMUSP00000015433	TRANSLATION	protein_coding	-	CCDS30229.1	1	148	0	0	1.5	62.4	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000015289	Lage3	ENSMUST00000114152	ENSMUSP00000109789	TRANSLATION	protein_coding	-	-	2	111	0	0	0	26.1	0	-4,-5	-	-	2.508	MINOR
ENSMUSG00000094601	Gm5926	ENSMUST00000178459	ENSMUSP00000136853	TRANSLATION	protein_coding	-	-	-	236	0	1	0.5	216.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094601	Gm5926	ENSMUST00000177740	ENSMUSP00000136043	TRANSLATION	protein_coding	-	-	-	236	0	1	0.5	216.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000036551	Akap14	ENSMUST00000046557	ENSMUSP00000048773	TRANSLATION	protein_coding	-	CCDS30070.1	1	536	0	0	0.5	155.1	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000072923	Gm10439	ENSMUST00000101181	ENSMUSP00000098741	TRANSLATION	protein_coding	-	CCDS41170.1	5	433	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000031274	Col4a5	ENSMUST00000128669	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031274	Col4a5	ENSMUST00000112930	ENSMUSP00000108552	TRANSLATION	protein_coding	-	CCDS41154.1	1	1691	0	25.405	0.5	729.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031274	Col4a5	ENSMUST00000112931	ENSMUSP00000108553	TRANSLATION	protein_coding	-	CCDS41154.1	1	1691	0	25.405	0.5	729.6	0	3,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000031274	Col4a5	ENSMUST00000130732	ENSMUSP00000116610	TRANSLATION	protein_coding	start	-	1	800	0	16.18	0	534.2	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000067561	Dmrtc1c2	ENSMUST00000087896	ENSMUSP00000085206	TRANSLATION	protein_coding	-	CCDS81161.1	1	233	0	0	0.5	42.5	0	-4,-5	-	-	6	ALTERNATIVE:2
ENSMUSG00000067561	Dmrtc1c2	ENSMUST00000087899	ENSMUSP00000085209	TRANSLATION	protein_coding	-	CCDS53159.1	5	238	0	0	0.5	42.5	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000067561	Dmrtc1c2	ENSMUST00000120314	ENSMUSP00000113033	TRANSLATION	protein_coding	-	CCDS53159.1	1	238	0	0	0.5	42.5	0	-4,-7	-	-	6	PRINCIPAL:3
ENSMUSG00000006678	Pola1	ENSMUST00000124236	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006678	Pola1	ENSMUST00000142479	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000006678	Pola1	ENSMUST00000006856	ENSMUSP00000006856	TRANSLATION	protein_coding	-	CCDS30272.1	1	1465	9	26.18	4.1	923.9	0	-4,-5	-	-	19	PRINCIPAL:1
ENSMUSG00000006678	Pola1	ENSMUST00000127718	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079532	Ctag2l2	ENSMUST00000114117	ENSMUSP00000109752	TRANSLATION	protein_coding	-	CCDS41027.1	5	208	0	0	1.5	51.3	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000096645	Spin2e	ENSMUST00000238411	ENSMUSP00000158816	TRANSLATION	protein_coding	stop	-	-	117	0	1	0	85.1	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096645	Spin2e	ENSMUST00000179716	ENSMUSP00000136904	TRANSLATION	protein_coding	start	-	-	234	0	2	0.5	218.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096645	Spin2e	ENSMUST00000238728	ENSMUSP00000158691	TRANSLATION	protein_coding	-	-	-	236	0	2	0.5	218.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000054850	Smim10l2a	ENSMUST00000068106	ENSMUSP00000066705	TRANSLATION	protein_coding	-	-	1	78	0	0	1	131.2	0	1,1	-	-	6	PRINCIPAL:1
ENSMUSG00000033777	Tlr13	ENSMUST00000040065	ENSMUSP00000043101	TRANSLATION	protein_coding	-	CCDS30338.1	1	991	0	1	0.5	278.6	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000033777	Tlr13	ENSMUST00000139380	-	NO_TRANSLATION	retained_intron
ENSMUSG00000041658	Rragb	ENSMUST00000144175	ENSMUSP00000134162	TRANSLATION	protein_coding	stop	-	5	116	14	2.382	0	129.9	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000041658	Rragb	ENSMUST00000039720	ENSMUSP00000039013	TRANSLATION	protein_coding	-	CCDS30480.1	1	374	21	6.247	7.5	352	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000025059	Gk	ENSMUST00000142152	ENSMUSP00000120754	TRANSLATION	protein_coding	-	CCDS81150.1	1	552	11	13.28	2.9	502.7	0	-4,-7	-	-	16.128	MINOR
ENSMUSG00000025059	Gk	ENSMUST00000122950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025059	Gk	ENSMUST00000156390	ENSMUSP00000119564	TRANSLATION	protein_coding	-	CCDS41050.1	1	553	11	13.28	8.8	524.9	1	-4,-7	-	-	19.728	MINOR
ENSMUSG00000025059	Gk	ENSMUST00000113978	ENSMUSP00000109611	TRANSLATION	protein_coding	-	CCDS81149.1	1	559	11	13.412	8.8	541.7	1	-4,-7	-	-	21	PRINCIPAL:1
ENSMUSG00000025059	Gk	ENSMUST00000124386	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025059	Gk	ENSMUST00000026039	ENSMUSP00000026039	TRANSLATION	protein_coding	-	CCDS53126.1	1	524	11	13.28	6.3	524.9	0	-4,-7	-	-	18.765	MINOR
ENSMUSG00000025059	Gk	ENSMUST00000125081	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025059	Gk	ENSMUST00000152221	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000095659	Spin2g	ENSMUST00000203586	ENSMUSP00000145332	TRANSLATION	protein_coding	-	-	1	236	0	1.066	0.5	209.9	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095659	Spin2g	ENSMUST00000178425	ENSMUSP00000137578	TRANSLATION	protein_coding	start	-	-	228	0	1	0	209.9	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000080394	ENSMUSP00000079257	TRANSLATION	protein_coding	-	CCDS41194.1	1	628	0	7.34	2.9	116.8	0	-4,-5	-	-	7.112	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000134062	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000112447	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000112456	ENSMUSP00000108075	TRANSLATION	protein_coding	-	CCDS53234.1	1	665	0	8.34	5.1	180.4	0	-4,-5	-	-	14	PRINCIPAL:2
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000123433	ENSMUSP00000114799	TRANSLATION	protein_coding	stop	-	5	208	0	2.84	0	59.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000141354	ENSMUSP00000114262	TRANSLATION	nonsense_mediated_decay	-	-	1	447	0	5.29	0	116.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000152426	ENSMUSP00000117618	TRANSLATION	protein_coding	start	-	3	209	0	2.05	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000128185	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000073094	ENSMUSP00000072840	TRANSLATION	protein_coding	-	-	5	709	0	8.34	5.1	180.4	0	-4,-5	-	-	14	ALTERNATIVE:1
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000150433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000112451	ENSMUSP00000108070	TRANSLATION	protein_coding	-	CCDS53235.1	1	427	0	4.8	5.1	57.7	0	-4,-5	-	-	2	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000130987	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000112453	ENSMUSP00000108072	TRANSLATION	protein_coding	-	-	5	464	0	4.8	0	57.7	0	-4,-5	-	-	0	MINOR
ENSMUSG00000040990	Sh3kbp1	ENSMUST00000142426	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031328	Flna	ENSMUST00000130007	ENSMUSP00000121082	TRANSLATION	protein_coding	start	-	5	2583	0	40.88	0	1442.8	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000127924	ENSMUSP00000117324	TRANSLATION	nonsense_mediated_decay	start	-	3	74	0	1.5	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000130203	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031328	Flna	ENSMUST00000124950	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031328	Flna	ENSMUST00000156766	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031328	Flna	ENSMUST00000133288	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031328	Flna	ENSMUST00000141528	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031328	Flna	ENSMUST00000150554	ENSMUSP00000116758	TRANSLATION	protein_coding	start/stop	-	5	277	0	5.75	0	164.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000033699	ENSMUSP00000033699	TRANSLATION	protein_coding	-	-	5	2647	0	41.715	6.3	1435.2	0	-4,-7	-	-	13.214	ALTERNATIVE:1
ENSMUSG00000031328	Flna	ENSMUST00000144429	ENSMUSP00000123278	TRANSLATION	nonsense_mediated_decay	start	-	1	511	0	8.85	0	260.3	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000101454	ENSMUSP00000098997	TRANSLATION	protein_coding	-	CCDS41018.1	1	2639	0	41.88	6.3	1442.8	0	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000031328	Flna	ENSMUST00000133609	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031328	Flna	ENSMUST00000239316	ENSMUSP00000159282	TRANSLATION	nonsense_mediated_decay	start	-	-	73	0	0.8	0	45.1	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000127463	ENSMUSP00000114827	TRANSLATION	protein_coding	start/stop	-	5	280	0	6.08	0	91.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031328	Flna	ENSMUST00000114299	ENSMUSP00000109938	TRANSLATION	protein_coding	-	CCDS41018.1	5	2639	0	41.88	6.3	1442.8	0	-4,-7	-	-	14	PRINCIPAL:2
ENSMUSG00000031328	Flna	ENSMUST00000133174	-	NO_TRANSLATION	retained_intron
ENSMUSG00000094861	Gm5072	ENSMUST00000063726	ENSMUSP00000064613	TRANSLATION	protein_coding	-	CCDS53131.1	-	344	0	0.6	1.5	51.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031362	Xlr4c	ENSMUST00000114530	ENSMUSP00000110176	TRANSLATION	protein_coding	-	CCDS41012.1	1	215	0	2.12	1.5	129.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031362	Xlr4c	ENSMUST00000156749	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031362	Xlr4c	ENSMUST00000126155	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031362	Xlr4c	ENSMUST00000068551	ENSMUSP00000070117	TRANSLATION	protein_coding	-	CCDS41012.1	5	215	0	2.12	1.5	129.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031362	Xlr4c	ENSMUST00000114531	ENSMUSP00000110177	TRANSLATION	protein_coding	-	CCDS41012.1	2	215	0	2.12	1.5	129.1	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000031362	Xlr4c	ENSMUST00000114528	ENSMUSP00000110174	TRANSLATION	protein_coding	stop	-	5	73	0	0	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000034551	Hdx	ENSMUST00000113422	ENSMUSP00000109049	TRANSLATION	protein_coding	-	CCDS41105.1	1	692	0	1.6	4.1	21.4	0	-4,-7	-	-	13	PRINCIPAL:3
ENSMUSG00000034551	Hdx	ENSMUST00000038472	ENSMUSP00000043482	TRANSLATION	protein_coding	-	CCDS72422.1	1	634	0	1.6	2.9	21.4	0	-4,-6	-	-	12.613	ALTERNATIVE:2
ENSMUSG00000039201	Tbc1d25	ENSMUST00000172020	ENSMUSP00000131652	TRANSLATION	protein_coding	-	CCDS52989.1	1	723	0	0.8	0.5	135.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039201	Tbc1d25	ENSMUST00000133093	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039201	Tbc1d25	ENSMUST00000239441	ENSMUSP00000159357	TRANSLATION	protein_coding	-	-	-	688	0	0.8	3.4	135.3	0	-4,-5	-	-	13	ALTERNATIVE:2
ENSMUSG00000039201	Tbc1d25	ENSMUST00000143984	ENSMUSP00000138768	TRANSLATION	protein_coding	-	-	5	560	0	0.8	0.5	135.3	0	-4,-5	-	-	12	ALTERNATIVE:2
ENSMUSG00000039201	Tbc1d25	ENSMUST00000039892	ENSMUSP00000047838	TRANSLATION	protein_coding	-	CCDS29988.1	1	742	0	0.8	0.5	135.3	0	-4,-1	-	-	12	PRINCIPAL:3
ENSMUSG00000079480	Pin4	ENSMUST00000144367	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079480	Pin4	ENSMUST00000113627	ENSMUSP00000109257	TRANSLATION	protein_coding	-	CCDS41082.1	1	131	3	2.75	5.1	0	0	-4,-5	-	-	11	PRINCIPAL:1
ENSMUSG00000055653	Gpc3	ENSMUST00000069360	ENSMUSP00000064131	TRANSLATION	protein_coding	-	CCDS30125.1	1	579	0	2.56	6.5	598.8	0	4,-1	-	-	14	PRINCIPAL:1
ENSMUSG00000055653	Gpc3	ENSMUST00000114857	ENSMUSP00000110507	TRANSLATION	protein_coding	-	-	1	430	0	2.16	0	516.1	0	4,-1	-	-	6.102	MINOR
ENSMUSG00000025270	Alas2	ENSMUST00000112715	ENSMUSP00000108335	TRANSLATION	protein_coding	-	CCDS53220.1	1	572	14	6.8	0.5	258.3	0	-3,-2	-	-	16.092	MINOR
ENSMUSG00000025270	Alas2	ENSMUST00000142474	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000025270	Alas2	ENSMUST00000134670	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025270	Alas2	ENSMUST00000066337	ENSMUSP00000066040	TRANSLATION	protein_coding	-	CCDS41173.1	1	587	14	6.8	1.5	290.1	0	-2,-2	-	-	18	PRINCIPAL:1
ENSMUSG00000036131	Frmd7	ENSMUST00000060650	ENSMUSP00000057103	TRANSLATION	protein_coding	-	CCDS53067.1	5	703	0	7.32	1.5	228.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000036131	Frmd7	ENSMUST00000164311	ENSMUSP00000126628	TRANSLATION	nonsense_mediated_decay	-	-	5	85	0	2	0	57	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031388	Naa10	ENSMUST00000114391	ENSMUSP00000110033	TRANSLATION	protein_coding	-	-	5	220	16	4.18	0	43	0	-4,-5	-	-	10.758	MINOR
ENSMUSG00000031388	Naa10	ENSMUST00000114390	ENSMUSP00000110032	TRANSLATION	protein_coding	-	-	5	233	22	4.68	0	46.7	0	-4,-5	-	-	16.14	MINOR
ENSMUSG00000031388	Naa10	ENSMUST00000033763	ENSMUSP00000033763	TRANSLATION	protein_coding	-	CCDS30217.1	1	235	23	4.68	1.5	57.2	0	-4,-5	-	-	17.886	PRINCIPAL:3
ENSMUSG00000031388	Naa10	ENSMUST00000141211	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031388	Naa10	ENSMUST00000114389	ENSMUSP00000110031	TRANSLATION	protein_coding	-	CCDS53102.1	1	225	23	4.68	1.5	57.2	0	-4,-5	-	-	17.886	ALTERNATIVE:2
ENSMUSG00000031388	Naa10	ENSMUST00000143076	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031388	Naa10	ENSMUST00000114387	ENSMUSP00000110029	TRANSLATION	protein_coding	-	CCDS81139.1	2	170	23	4.68	1.5	58.3	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000031388	Naa10	ENSMUST00000096316	ENSMUSP00000094040	TRANSLATION	protein_coding	-	-	2	206	23	4.68	0	57.5	0	-4,-5	-	-	17.916	ALTERNATIVE:2
ENSMUSG00000031388	Naa10	ENSMUST00000124446	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031388	Naa10	ENSMUST00000139105	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031388	Naa10	ENSMUST00000149591	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031388	Naa10	ENSMUST00000153929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039231	Suv39h1	ENSMUST00000115638	ENSMUSP00000111301	TRANSLATION	protein_coding	-	CCDS40846.1	1	412	29	4	7.5	199.2	0	-4,-5	-	-	21	PRINCIPAL:1
ENSMUSG00000039231	Suv39h1	ENSMUST00000115637	ENSMUSP00000111300	TRANSLATION	protein_coding	-	CCDS72337.1	2	413	29	4	1.5	199.2	0	-4,-5	-	-	18.231	MINOR
ENSMUSG00000039231	Suv39h1	ENSMUST00000127617	-	NO_TRANSLATION	retained_intron
ENSMUSG00000039231	Suv39h1	ENSMUST00000115636	ENSMUSP00000111299	TRANSLATION	protein_coding	-	-	1	286	13	1.666	0	114.9	0	-4,-5	-	-	2.274	MINOR
ENSMUSG00000039231	Suv39h1	ENSMUST00000150095	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031302	Nlgn3	ENSMUST00000065858	ENSMUSP00000066304	TRANSLATION	protein_coding	-	CCDS30313.1	1	825	2	6.37	7.5	653.2	2	1,-4	-	-	15.8	PRINCIPAL:2
ENSMUSG00000031302	Nlgn3	ENSMUST00000147443	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031302	Nlgn3	ENSMUST00000130555	ENSMUSP00000122213	TRANSLATION	protein_coding	stop	-	5	510	2	5	0	588.9	0	1,-4	-	-	-1	MINOR
ENSMUSG00000031302	Nlgn3	ENSMUST00000151528	ENSMUSP00000123283	TRANSLATION	protein_coding	-	-	5	845	2	6.97	7	650	2	1,-4	-	-	16.577	ALTERNATIVE:1
ENSMUSG00000031302	Nlgn3	ENSMUST00000118111	ENSMUSP00000113863	TRANSLATION	protein_coding	-	-	5	711	2	5.37	1.2	553	2	-4,-7	-	-	4.895	MINOR
ENSMUSG00000031302	Nlgn3	ENSMUST00000144860	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000060673	4930595M18Rik	ENSMUST00000080083	ENSMUSP00000078984	TRANSLATION	protein_coding	-	CCDS53123.1	1	829	8	0.6	0.5	91.6	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000068218	Ssxb9	ENSMUST00000115584	ENSMUSP00000111247	TRANSLATION	protein_coding	-	CCDS29996.2	5	185	0	0	0.5	82.5	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000079432	Gm15023	ENSMUST00000113183	ENSMUSP00000108808	TRANSLATION	protein_coding	-	CCDS53186.1	1	467	0	0	0.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000031166	Wdr13	ENSMUST00000127062	ENSMUSP00000138509	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031166	Wdr13	ENSMUST00000130832	ENSMUSP00000138468	TRANSLATION	protein_coding	-	CCDS72338.1	5	393	0	3.42	6.3	34.7	0	-4,-5	-	-	13.928	MINOR
ENSMUSG00000031166	Wdr13	ENSMUST00000131929	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031166	Wdr13	ENSMUST00000115623	ENSMUSP00000111286	TRANSLATION	protein_coding	-	CCDS29986.1	5	485	0	3.42	12	34.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031166	Wdr13	ENSMUST00000130050	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031166	Wdr13	ENSMUST00000033506	ENSMUSP00000033506	TRANSLATION	protein_coding	-	CCDS29986.1	1	485	0	3.42	12	34.7	0	-4,-7	-	-	16	PRINCIPAL:1
ENSMUSG00000031166	Wdr13	ENSMUST00000153839	ENSMUSP00000120395	TRANSLATION	protein_coding	stop	-	3	219	0	0.06	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031166	Wdr13	ENSMUST00000133292	ENSMUSP00000138392	TRANSLATION	nonsense_mediated_decay	-	-	1	43	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031166	Wdr13	ENSMUST00000149257	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031166	Wdr13	ENSMUST00000148135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000046942	Mageb16	ENSMUST00000114016	ENSMUSP00000109649	TRANSLATION	protein_coding	-	CCDS53122.1	1	363	0	0.6	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000046942	Mageb16	ENSMUST00000052283	ENSMUSP00000087292	TRANSLATION	protein_coding	-	CCDS53122.1	1	363	0	0.6	1.5	0	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000025262	Fam120c	ENSMUST00000073364	ENSMUSP00000073082	TRANSLATION	protein_coding	-	CCDS41175.1	1	1091	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000025262	Fam120c	ENSMUST00000125924	-	NO_TRANSLATION	retained_intron
ENSMUSG00000035651	4930480E11Rik	ENSMUST00000035626	ENSMUSP00000037594	TRANSLATION	protein_coding	-	CCDS53120.1	-	394	0	0	1.5	0	0	-4,-6	-	-	0	PRINCIPAL:1
ENSMUSG00000058252	Tcp11x2	ENSMUST00000078605	ENSMUSP00000077676	TRANSLATION	protein_coding	-	CCDS41129.1	1	503	0	0	0.5	353	0	-4,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000044150	Bclaf3	ENSMUST00000057180	ENSMUSP00000051031	TRANSLATION	protein_coding	-	-	1	674	0	0	0.5	510.4	0	-4,0	-	-	4.296	MINOR
ENSMUSG00000044150	Bclaf3	ENSMUST00000144598	ENSMUSP00000121868	TRANSLATION	protein_coding	stop	-	5	43	0	0	0	39.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000044150	Bclaf3	ENSMUST00000149054	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000044150	Bclaf3	ENSMUST00000131623	ENSMUSP00000116320	TRANSLATION	protein_coding	stop	-	3	60	0	0	0	54.3	0	-4,0	-	-	-1	MINOR
ENSMUSG00000044150	Bclaf3	ENSMUST00000112464	ENSMUSP00000108083	TRANSLATION	protein_coding	-	CCDS30503.2	1	752	0	0	0.5	538.8	0	-4,0	-	-	6	PRINCIPAL:1
ENSMUSG00000044150	Bclaf3	ENSMUST00000154694	-	NO_TRANSLATION	retained_intron
ENSMUSG00000078208	Fthl17b	ENSMUST00000105006	ENSMUSP00000100623	TRANSLATION	protein_coding	-	CCDS52993.1	-	176	0	1	1.5	95.6	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000035522	Tsga8	ENSMUST00000049420	ENSMUSP00000043015	TRANSLATION	protein_coding	-	CCDS53124.1	1	238	0	0	0.5	0	0	-4,-5	-	-	0	PRINCIPAL:1
ENSMUSG00000025658	Cnksr2	ENSMUST00000026750	ENSMUSP00000026750	TRANSLATION	protein_coding	-	CCDS30501.1	1	1032	8	5.83	8.8	503.8	0	-4,-6	-	-	21	PRINCIPAL:1
ENSMUSG00000025658	Cnksr2	ENSMUST00000139664	-	NO_TRANSLATION	retained_intron
ENSMUSG00000025658	Cnksr2	ENSMUST00000112513	ENSMUSP00000108132	TRANSLATION	protein_coding	-	-	5	896	8	5.83	5.1	503.8	0	-4,-6	-	-	19.578	MINOR
ENSMUSG00000016150	Tenm1	ENSMUST00000154433	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016150	Tenm1	ENSMUST00000126161	-	NO_TRANSLATION	retained_intron
ENSMUSG00000016150	Tenm1	ENSMUST00000016294	ENSMUSP00000016294	TRANSLATION	protein_coding	-	CCDS40953.1	1	2731	0	3.692	6.5	362.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000016150	Tenm1	ENSMUST00000115058	ENSMUSP00000110710	TRANSLATION	protein_coding	-	-	5	2724	0	3.626	2.9	362.3	0	-4,-5	-	-	12.558	MINOR
ENSMUSG00000016150	Tenm1	ENSMUST00000115059	ENSMUSP00000110711	TRANSLATION	protein_coding	-	CCDS40953.1	1	2731	0	3.692	6.5	362.3	0	-4,-5	-	-	14	PRINCIPAL:1
ENSMUSG00000016150	Tenm1	ENSMUST00000125231	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000067360	Pramel3	ENSMUST00000118821	ENSMUSP00000112761	TRANSLATION	protein_coding	-	-	1	463	0	0.4	1.5	0	0	-4,-7	-	-	6	ALTERNATIVE:2
ENSMUSG00000067360	Pramel3	ENSMUST00000113176	ENSMUSP00000108801	TRANSLATION	protein_coding	-	CCDS30403.1	1	462	0	0.4	1.5	0	0	-4,-6	-	-	6	PRINCIPAL:2
ENSMUSG00000025665	Rps6ka6	ENSMUST00000096348	ENSMUSP00000094073	TRANSLATION	protein_coding	-	-	2	781	38	17.03	0.5	500.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000025665	Rps6ka6	ENSMUST00000123102	ENSMUSP00000120004	TRANSLATION	nonsense_mediated_decay	-	-	3	42	0	0	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000065976	ENSMUSP00000068483	TRANSLATION	protein_coding	-	-	1	737	38	16.23	0	462.6	0	-4,-7	-	-	14.112	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000137712	ENSMUSP00000121722	TRANSLATION	protein_coding	-	-	5	760	38	17.03	0	500.7	0	-4,-7	-	-	18	ALTERNATIVE:2
ENSMUSG00000025665	Rps6ka6	ENSMUST00000156639	ENSMUSP00000121075	TRANSLATION	protein_coding	stop	-	5	130	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000082034	ENSMUSP00000080694	TRANSLATION	protein_coding	-	CCDS30356.1	5	860	38	17.03	1.5	500.7	0	-4,0	-	-	18	PRINCIPAL:2
ENSMUSG00000025665	Rps6ka6	ENSMUST00000123213	ENSMUSP00000118075	TRANSLATION	protein_coding	stop	-	3	163	8	2.35	0	0	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000132319	ENSMUSP00000120611	TRANSLATION	protein_coding	stop	-	5	166	0	0.1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000113428	ENSMUSP00000109055	TRANSLATION	protein_coding	-	-	5	776	38	17.03	0	482.5	0	-4,-7	-	-	16.908	ALTERNATIVE:2
ENSMUSG00000025665	Rps6ka6	ENSMUST00000123951	ENSMUSP00000115975	TRANSLATION	protein_coding	stop	-	2	160	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000138645	ENSMUSP00000121489	TRANSLATION	protein_coding	start/stop	-	3	162	8	2.68	0	32.4	0	-4,0	-	-	-1	MINOR
ENSMUSG00000025665	Rps6ka6	ENSMUST00000128819	ENSMUSP00000117228	TRANSLATION	protein_coding	stop	-	5	203	4	1.1	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000052821	Cysltr1	ENSMUST00000113480	ENSMUSP00000109108	TRANSLATION	protein_coding	-	CCDS41098.1	1	352	0	0.6	0.5	142.6	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000052821	Cysltr1	ENSMUST00000064892	ENSMUSP00000063520	TRANSLATION	protein_coding	-	CCDS41098.1	2	352	0	0.6	0.5	142.6	6	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071686	Tex13a	ENSMUST00000096314	ENSMUSP00000094038	TRANSLATION	protein_coding	-	CCDS41142.1	1	377	4	0	1.5	207.7	0	-4,-5	-	-	10	PRINCIPAL:1
ENSMUSG00000073291	Gm10491	ENSMUST00000085330	ENSMUSP00000099217	TRANSLATION	protein_coding	stop	-	5	39	0	0	0	0	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000031163	Glod5	ENSMUST00000033503	ENSMUSP00000033503	TRANSLATION	protein_coding	-	CCDS29982.1	1	148	3	3	1.5	35	0	-4,-5	-	-	15	PRINCIPAL:1
ENSMUSG00000079487	Med12	ENSMUST00000117203	ENSMUSP00000112729	TRANSLATION	protein_coding	-	-	5	2182	0	0.79	0	941.1	0	-4,-7	-	-	11.538	ALTERNATIVE:2
ENSMUSG00000079487	Med12	ENSMUST00000117706	ENSMUSP00000112852	TRANSLATION	protein_coding	-	-	5	2157	0	0.79	0	878.8	0	-4,-7	-	-	7.8	MINOR
ENSMUSG00000079487	Med12	ENSMUST00000137664	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079487	Med12	ENSMUST00000132269	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079487	Med12	ENSMUST00000146877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000079487	Med12	ENSMUST00000156131	-	NO_TRANSLATION	retained_intron
ENSMUSG00000079487	Med12	ENSMUST00000087948	ENSMUSP00000085260	TRANSLATION	protein_coding	-	CCDS41078.1	1	2190	0	0.856	1.5	941.1	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000079487	Med12	ENSMUST00000087956	ENSMUSP00000085269	TRANSLATION	protein_coding	-	-	5	2169	0	0.856	0	861	0	-4,-7	-	-	7.194	MINOR
ENSMUSG00000079487	Med12	ENSMUST00000148846	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031109	Enox2	ENSMUST00000114918	ENSMUSP00000110568	TRANSLATION	protein_coding	-	CCDS30115.1	1	598	0	0	0.5	34.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031109	Enox2	ENSMUST00000137518	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031109	Enox2	ENSMUST00000033437	ENSMUSP00000033437	TRANSLATION	protein_coding	-	CCDS30115.1	1	598	0	0	0.5	34.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031109	Enox2	ENSMUST00000114914	ENSMUSP00000110564	TRANSLATION	protein_coding	-	CCDS30115.1	1	598	0	0	0.5	34.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031109	Enox2	ENSMUST00000114911	ENSMUSP00000110561	TRANSLATION	protein_coding	-	CCDS72378.1	1	587	0	0	0.5	34.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031109	Enox2	ENSMUST00000114912	ENSMUSP00000110562	TRANSLATION	protein_coding	-	CCDS72377.1	1	582	0	0	7.5	34.3	0	-4,-5	-	-	9	PRINCIPAL:1
ENSMUSG00000031109	Enox2	ENSMUST00000167659	ENSMUSP00000128885	TRANSLATION	protein_coding	-	CCDS30115.1	5	598	0	0	0.5	34.3	0	-4,-5	-	-	6	MINOR
ENSMUSG00000031109	Enox2	ENSMUST00000141393	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031109	Enox2	ENSMUST00000155770	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031189	Aff2	ENSMUST00000151662	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031189	Aff2	ENSMUST00000033532	ENSMUSP00000033532	TRANSLATION	protein_coding	-	CCDS30173.1	1	1272	0	0.7	0.5	874.1	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000031189	Aff2	ENSMUST00000143097	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031189	Aff2	ENSMUST00000139977	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000045427	Hnrnph2	ENSMUST00000059297	ENSMUSP00000050838	TRANSLATION	protein_coding	-	CCDS30397.1	1	449	0	0.6	8.8	180.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000045427	Hnrnph2	ENSMUST00000074950	ENSMUSP00000074483	TRANSLATION	protein_coding	-	CCDS30397.1	1	449	0	0.6	8.8	180.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000045427	Hnrnph2	ENSMUST00000113202	ENSMUSP00000108828	TRANSLATION	protein_coding	-	CCDS30397.1	2	449	0	0.6	8.8	180.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000045427	Hnrnph2	ENSMUST00000050331	ENSMUSP00000108827	TRANSLATION	protein_coding	-	CCDS30397.1	5	449	0	0.6	8.8	180.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000045427	Hnrnph2	ENSMUST00000113203	ENSMUSP00000108829	TRANSLATION	protein_coding	-	CCDS30397.1	5	449	0	0.6	8.8	180.1	0	-4,-6	-	-	15	PRINCIPAL:1
ENSMUSG00000094759	Gm10487	ENSMUST00000180344	ENSMUSP00000136976	TRANSLATION	protein_coding	-	CCDS53034.1	1	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094759	Gm10487	ENSMUST00000177566	ENSMUSP00000136994	TRANSLATION	protein_coding	-	CCDS53034.1	5	212	0	1.2	0.5	35.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000031139	Mcf2	ENSMUST00000101531	ENSMUSP00000099070	TRANSLATION	protein_coding	-	CCDS30160.1	1	928	0	8.58	0.5	190.7	0	-4,-2	-	-	11.082	PRINCIPAL:3
ENSMUSG00000031139	Mcf2	ENSMUST00000063507	ENSMUSP00000067075	TRANSLATION	protein_coding	-	-	1	1031	0	8.58	0	206	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000031139	Mcf2	ENSMUST00000033478	ENSMUSP00000033478	TRANSLATION	protein_coding	-	CCDS81129.1	1	944	0	8.58	0.5	190.7	0	-4,-2	-	-	11.082	ALTERNATIVE:2
ENSMUSG00000015665	Awat1	ENSMUST00000096361	ENSMUSP00000094088	TRANSLATION	protein_coding	-	CCDS41074.1	1	328	0	0	2.7	361.5	0	-3,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000031389	Arhgap4	ENSMUST00000151600	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000145159	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000127163	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000114404	ENSMUSP00000110046	TRANSLATION	protein_coding	-	CCDS53101.1	1	944	0	15.556	0.5	205.1	0	-4,-6	-	-	8.952	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000147510	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000142925	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031389	Arhgap4	ENSMUST00000140393	ENSMUSP00000117602	TRANSLATION	nonsense_mediated_decay	-	-	5	605	0	11.278	0	50.8	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000149135	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031389	Arhgap4	ENSMUST00000114406	ENSMUSP00000110048	TRANSLATION	protein_coding	-	-	1	767	0	13.086	0	244.9	0	-4,-6	-	-	6.402	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000149774	ENSMUSP00000115193	TRANSLATION	protein_coding	start/stop	-	5	274	0	4.978	0	127.3	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000128329	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000143536	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000031389	Arhgap4	ENSMUST00000064376	ENSMUSP00000067477	TRANSLATION	protein_coding	-	CCDS41014.1	1	955	0	15.886	0.5	244.9	0	-4,-6	-	-	12	PRINCIPAL:2
ENSMUSG00000031389	Arhgap4	ENSMUST00000143696	ENSMUSP00000114877	TRANSLATION	protein_coding	start/stop	-	5	199	0	4.606	0	136.3	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000130976	ENSMUSP00000120650	TRANSLATION	nonsense_mediated_decay	-	-	1	847	0	15.886	0	244.9	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000123283	ENSMUSP00000122794	TRANSLATION	nonsense_mediated_decay	-	-	3	44	0	0.6	0	0	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000148319	-	NO_TRANSLATION	retained_intron
ENSMUSG00000031389	Arhgap4	ENSMUST00000124798	ENSMUSP00000121215	TRANSLATION	protein_coding	start/stop	-	5	214	0	4.35	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000114407	ENSMUSP00000110049	TRANSLATION	protein_coding	-	CCDS53100.1	1	934	0	15.136	0.5	244.9	0	-4,-6	-	-	10.5	MINOR
ENSMUSG00000031389	Arhgap4	ENSMUST00000114405	ENSMUSP00000110047	TRANSLATION	protein_coding	-	-	5	965	0	15.886	0	244.9	0	-4,-6	-	-	12	ALTERNATIVE:2
ENSMUSG00000094004	Gm5128	ENSMUST00000113173	ENSMUSP00000108798	TRANSLATION	protein_coding	-	CCDS53187.1	1	463	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000094004	Gm5128	ENSMUST00000180198	ENSMUSP00000137160	TRANSLATION	protein_coding	-	CCDS53187.1	1	463	0	0	1.5	0	0	-4,-7	-	-	0	PRINCIPAL:1
ENSMUSG00000040229	Gpr34	ENSMUST00000041708	ENSMUSP00000042715	TRANSLATION	protein_coding	-	CCDS30028.1	1	375	0	0.48	1.5	128	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000040229	Gpr34	ENSMUST00000096492	ENSMUSP00000094236	TRANSLATION	protein_coding	-	CCDS30028.1	1	375	0	0.48	1.5	128	5	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000067562	Dmrtc1c1	ENSMUST00000118218	ENSMUSP00000113737	TRANSLATION	protein_coding	-	CCDS53158.1	1	238	0	0	0.5	42.5	0	-4,-7	-	-	6	PRINCIPAL:1
ENSMUSG00000067562	Dmrtc1c1	ENSMUST00000131451	ENSMUSP00000119462	TRANSLATION	protein_coding	stop	-	3	140	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000071766	Rhox12	ENSMUST00000115146	ENSMUSP00000110799	TRANSLATION	protein_coding	-	CCDS30087.1	2	186	0	1.3	0.5	55.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071766	Rhox12	ENSMUST00000096453	ENSMUSP00000094191	TRANSLATION	protein_coding	-	CCDS30087.1	1	186	0	1.3	0.5	55.3	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000071766	Rhox12	ENSMUST00000183737	ENSMUSP00000139303	TRANSLATION	protein_coding	-	-	3	159	0	0.7	0	38.8	0	-4,-5	-	-	7.44	MINOR
ENSMUSG00000094181	Gm21739	ENSMUST00000178639	ENSMUSP00000137088	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094181	Gm21739	ENSMUST00000188917	ENSMUSP00000140604	TRANSLATION	protein_coding	-	-	5	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094052	Gm21118	ENSMUST00000187418	ENSMUSP00000140466	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094052	Gm21118	ENSMUST00000180179	ENSMUSP00000137343	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095302	Ssty2	ENSMUST00000179136	ENSMUSP00000137417	TRANSLATION	protein_coding	-	CCDS85893.1	-	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095302	Ssty2	ENSMUST00000190565	ENSMUSP00000139505	TRANSLATION	protein_coding	-	CCDS85893.1	1	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094660	Gm21394	ENSMUST00000189463	ENSMUSP00000141090	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	198.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094660	Gm21394	ENSMUST00000179523	ENSMUSP00000136571	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	198.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000093848	Gm20865	ENSMUST00000181163	ENSMUSP00000138020	TRANSLATION	protein_coding	-	CCDS85869.1	1	227	0	1	1.5	196.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093848	Gm20865	ENSMUST00000179095	ENSMUSP00000136326	TRANSLATION	protein_coding	-	CCDS85869.1	-	227	0	1	1.5	196.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096036	Gm21778	ENSMUST00000178779	ENSMUSP00000136470	TRANSLATION	protein_coding	start	-	-	156	0	1	0	142.8	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096036	Gm21778	ENSMUST00000185926	ENSMUSP00000139442	TRANSLATION	protein_coding	-	-	5	232	0	2	0.5	218.6	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000100045	Gm20929	ENSMUST00000186578	ENSMUSP00000139649	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000068457	Uty	ENSMUST00000143286	ENSMUSP00000115113	TRANSLATION	protein_coding	-	-	1	1111	7	15.273	0	124.5	0	-4,-5	-	-	17.202	ALTERNATIVE:2
ENSMUSG00000068457	Uty	ENSMUST00000133976	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068457	Uty	ENSMUST00000154527	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068457	Uty	ENSMUST00000143958	ENSMUSP00000120069	TRANSLATION	nonsense_mediated_decay	-	-	5	78	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068457	Uty	ENSMUST00000185837	-	NO_TRANSLATION	retained_intron
ENSMUSG00000068457	Uty	ENSMUST00000154666	ENSMUSP00000122818	TRANSLATION	nonsense_mediated_decay	-	-	1	144	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068457	Uty	ENSMUST00000157073	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000068457	Uty	ENSMUST00000150715	ENSMUSP00000116372	TRANSLATION	nonsense_mediated_decay	start	-	3	100	0	0.4	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068457	Uty	ENSMUST00000154004	ENSMUSP00000114910	TRANSLATION	protein_coding	-	CCDS85833.1	1	1149	7	15.673	0.5	124.5	0	-4,-6	-	-	18	ALTERNATIVE:2
ENSMUSG00000068457	Uty	ENSMUST00000069309	ENSMUSP00000070012	TRANSLATION	protein_coding	-	CCDS41216.1	1	1212	7	15.673	0.5	124.5	0	-4,-5	-	-	18	PRINCIPAL:3
ENSMUSG00000068457	Uty	ENSMUST00000137048	ENSMUSP00000119406	TRANSLATION	protein_coding	stop	-	1	646	0	4.343	0	19.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000068457	Uty	ENSMUST00000139365	ENSMUSP00000114752	TRANSLATION	protein_coding	-	CCDS85834.1	1	1211	7	15.673	0.5	124.5	0	-4,-5	-	-	18	ALTERNATIVE:2
ENSMUSG00000100608	Gm21996	ENSMUST00000188269	ENSMUSP00000141173	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	75.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099925	Gm28827	ENSMUST00000187165	ENSMUSP00000139992	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095032	Gm21310	ENSMUST00000180130	ENSMUSP00000137593	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095032	Gm21310	ENSMUST00000189630	ENSMUSP00000139580	TRANSLATION	protein_coding	-	-	1	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000102388	Gm33815	ENSMUST00000195574	ENSMUSP00000141626	TRANSLATION	protein_coding	-	-	5	176	0	1.8	0	111.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000102388	Gm33815	ENSMUST00000194063	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102388	Gm33815	ENSMUST00000193593	ENSMUSP00000142163	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000102388	Gm33815	ENSMUST00000195504	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102388	Gm33815	ENSMUST00000193313	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000102053	Gm4064	ENSMUST00000187482	ENSMUSP00000140512	TRANSLATION	protein_coding	-	CCDS85835.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094556	Gm20821	ENSMUST00000180352	ENSMUSP00000137322	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	192.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094556	Gm20821	ENSMUST00000179829	ENSMUSP00000136629	TRANSLATION	protein_coding	-	-	5	227	0	1	1.5	192.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095852	Gm10256	ENSMUST00000188114	ENSMUSP00000140936	TRANSLATION	protein_coding	-	CCDS85836.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095852	Gm10256	ENSMUST00000179404	ENSMUSP00000136632	TRANSLATION	protein_coding	-	CCDS85836.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095852	Gm10256	ENSMUST00000189964	ENSMUSP00000140037	TRANSLATION	protein_coding	-	CCDS85836.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099530	Gm29644	ENSMUST00000189003	ENSMUSP00000139765	TRANSLATION	protein_coding,RT	-	-	5	191	0	1	0	138.7	0	-4,-1	-	-	-1	PRINCIPAL:1
ENSMUSG00000103919	Gm21366	ENSMUST00000192892	ENSMUSP00000141418	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095578	Gm21760	ENSMUST00000179811	ENSMUSP00000137009	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095578	Gm21760	ENSMUST00000187433	ENSMUSP00000140706	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100667	1700040F15Rik	ENSMUST00000188244	ENSMUSP00000140263	TRANSLATION	protein_coding	-	-	1	222	0	2.826	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094838	Gm20828	ENSMUST00000170889	ENSMUSP00000129237	TRANSLATION	protein_coding	-	-	-	228	0	1	1.5	187.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094838	Gm20828	ENSMUST00000190516	ENSMUSP00000139764	TRANSLATION	protein_coding	-	-	1	228	0	1	1.5	187.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095365	Rbm31y	ENSMUST00000179408	ENSMUSP00000136781	TRANSLATION	protein_coding	-	CCDS57813.1	-	565	0	0.2	1.5	89.9	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000069045	Ddx3y	ENSMUST00000091190	ENSMUSP00000088729	TRANSLATION	protein_coding	-	CCDS30543.1	1	658	20	10.75	1.5	279.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000069045	Ddx3y	ENSMUST00000187596	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069045	Ddx3y	ENSMUST00000188182	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069045	Ddx3y	ENSMUST00000188484	ENSMUSP00000140361	TRANSLATION	nonsense_mediated_decay	-	-	1	41	0	0	0	0	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000095462	Gm21725	ENSMUST00000178519	ENSMUSP00000136374	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000095769	Gm21891	ENSMUST00000179284	ENSMUSP00000136646	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000095242	Gm20834	ENSMUST00000179558	ENSMUSP00000136150	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	184.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000095242	Gm20834	ENSMUST00000185576	ENSMUSP00000140814	TRANSLATION	protein_coding	-	-	5	227	0	1	1.5	184.7	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094399	Gm21477	ENSMUST00000179970	ENSMUSP00000135953	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094399	Gm21477	ENSMUST00000189543	ENSMUSP00000140238	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095927	Gm21822	ENSMUST00000179302	ENSMUSP00000137501	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000103371	Gm35134	ENSMUST00000194086	ENSMUSP00000141239	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	83	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096520	Gm3376	ENSMUST00000186140	ENSMUSP00000141183	TRANSLATION	protein_coding	-	CCDS85842.1	1	380	0	2.8	0.5	67.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096520	Gm3376	ENSMUST00000180202	ENSMUSP00000136808	TRANSLATION	protein_coding	-	CCDS85842.1	5	380	0	2.8	0.5	67.2	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094227	Gm21767	ENSMUST00000178689	ENSMUSP00000137436	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000101399	Gm28961	ENSMUST00000190573	ENSMUSP00000139697	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	84.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095785	Gm20924	ENSMUST00000186910	ENSMUSP00000139614	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	191.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095785	Gm20924	ENSMUST00000177663	ENSMUSP00000137639	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	191.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000101157	Gm20905	ENSMUST00000190782	ENSMUSP00000140730	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095153	Gm21095	ENSMUST00000185776	ENSMUSP00000140431	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095153	Gm21095	ENSMUST00000177775	ENSMUSP00000136961	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094821	Gm21518	ENSMUST00000186938	ENSMUSP00000140794	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000094821	Gm21518	ENSMUST00000178115	ENSMUSP00000136187	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000101528	Gm29110	ENSMUST00000189924	ENSMUSP00000140088	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095520	Gm20877	ENSMUST00000191358	ENSMUSP00000139965	TRANSLATION	protein_coding	-	CCDS85864.1	1	227	0	1	1.5	186.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095520	Gm20877	ENSMUST00000100105	ENSMUSP00000097682	TRANSLATION	protein_coding	-	CCDS85864.1	5	227	0	1	1.5	186.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093927	Gm20918	ENSMUST00000179629	ENSMUSP00000136554	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	188.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000093927	Gm20918	ENSMUST00000188637	ENSMUSP00000140003	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	188.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094746	Gm20916	ENSMUST00000178063	ENSMUSP00000136085	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094746	Gm20916	ENSMUST00000185338	ENSMUSP00000140607	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094881	H2al2c	ENSMUST00000163651	ENSMUSP00000126567	TRANSLATION	protein_coding	-	CCDS53250.1	-	111	0	0.8	0.5	21.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000096122	Gm21943	ENSMUST00000178181	ENSMUSP00000136356	TRANSLATION	protein_coding	-	CCDS85887.1	1	227	0	1	1.5	197.7	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000069036	Sry	ENSMUST00000091178	ENSMUSP00000088717	TRANSLATION	protein_coding	-	CCDS30545.1	-	395	0	0.2	0.5	87.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100240	Gm20820	ENSMUST00000188754	ENSMUSP00000139858	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	84.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094575	Gm20738	ENSMUST00000177666	ENSMUSP00000136636	TRANSLATION	protein_coding	-	CCDS85877.1	1	227	0	1	1.5	191.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000102668	Gm29866	ENSMUST00000191675	ENSMUSP00000141776	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095141	Gm28891	ENSMUST00000178751	ENSMUSP00000136562	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095141	Gm28891	ENSMUST00000189333	ENSMUSP00000140248	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100535	Gm20870	ENSMUST00000189315	ENSMUSP00000139722	TRANSLATION	protein_coding	-	-	5	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101396	Gm28510	ENSMUST00000190572	ENSMUSP00000139602	TRANSLATION	protein_coding	-	-	1	240	0	3.2	0	92.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099861	Gm29049	ENSMUST00000185705	ENSMUSP00000141109	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	191	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094658	Rbmy	ENSMUST00000171534	ENSMUSP00000130080	TRANSLATION	protein_coding	-	CCDS30546.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094658	Rbmy	ENSMUST00000100360	ENSMUSP00000097930	TRANSLATION	protein_coding	-	CCDS30546.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000101146	Gm20814	ENSMUST00000190173	ENSMUSP00000140666	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096885	Gm21797	ENSMUST00000177579	ENSMUSP00000136989	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000101155	Sly	ENSMUST00000191355	ENSMUSP00000139451	TRANSLATION	protein_coding	stop	-	5	110	0	2.7	0	76.4	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000101155	Sly	ENSMUST00000190676	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101155	Sly	ENSMUST00000190292	ENSMUSP00000140340	TRANSLATION	protein_coding	-	CCDS81234.1	1	222	0	3.348	0.5	85.9	0	-4,-7	-	-	12	PRINCIPAL:2
ENSMUSG00000101155	Sly	ENSMUST00000189109	ENSMUSP00000141149	TRANSLATION	protein_coding	-	-	1	188	0	2.848	0.5	85.9	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000095793	Gm20855	ENSMUST00000180170	ENSMUSP00000137350	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000095793	Gm20855	ENSMUST00000186996	ENSMUSP00000140500	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099531	Gm20869	ENSMUST00000188958	ENSMUSP00000139478	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100338	Gm28870	ENSMUST00000187033	ENSMUSP00000141382	TRANSLATION	protein_coding	-	-	5	222	0	2.926	0.5	84.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094647	Gm21650	ENSMUST00000179073	ENSMUSP00000137112	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000094647	Gm21650	ENSMUST00000190551	ENSMUSP00000141092	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000093993	Gm20736	ENSMUST00000190282	ENSMUSP00000139870	TRANSLATION	protein_coding	-	CCDS57888.1	1	188	0	2.826	0.5	85.9	0	-4,-7	-	-	10.998	PRINCIPAL:2
ENSMUSG00000093993	Gm20736	ENSMUST00000185550	ENSMUSP00000140139	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	85.9	0	-4,-7	-	-	12	ALTERNATIVE:2
ENSMUSG00000093993	Gm20736	ENSMUST00000178198	ENSMUSP00000136973	TRANSLATION	protein_coding	-	CCDS57888.1	5	188	0	2.826	0.5	85.9	0	-4,-7	-	-	10.998	PRINCIPAL:2
ENSMUSG00000100634	Gm28171	ENSMUST00000190100	ENSMUSP00000140005	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	184.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094354	Gm21882	ENSMUST00000178332	ENSMUSP00000136641	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000093987	Gm21704	ENSMUST00000169382	ENSMUSP00000129249	TRANSLATION	protein_coding	-	CCDS85840.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000093987	Gm21704	ENSMUST00000187277	ENSMUSP00000140704	TRANSLATION	protein_coding	-	CCDS85840.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095634	Gm20816	ENSMUST00000177765	ENSMUSP00000137306	TRANSLATION	protein_coding	-	CCDS85895.1	-	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095634	Gm20816	ENSMUST00000187846	ENSMUSP00000140326	TRANSLATION	protein_coding	-	CCDS85895.1	1	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095263	Gm21094	ENSMUST00000177842	ENSMUSP00000136851	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095263	Gm21094	ENSMUST00000189577	ENSMUSP00000141113	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096268	Gm20914	ENSMUST00000180372	ENSMUSP00000136243	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	201	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096268	Gm20914	ENSMUST00000188887	ENSMUSP00000139808	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	201	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000099541	Gm21488	ENSMUST00000188744	ENSMUSP00000140532	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000102739	Gm20772	ENSMUST00000188928	ENSMUSP00000139540	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000100972	Gm28553	ENSMUST00000185924	ENSMUSP00000139793	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100892	Gm20897	ENSMUST00000185240	ENSMUSP00000140689	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101725	Gm29423	ENSMUST00000189580	ENSMUSP00000139436	TRANSLATION	protein_coding	-	-	5	49	0	0	0	0	0	-4,0	-	-	0	ALTERNATIVE:2
ENSMUSG00000101725	Gm29423	ENSMUST00000188222	ENSMUSP00000141061	TRANSLATION	nonsense_mediated_decay	-	-	5	45	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000101725	Gm29423	ENSMUST00000185989	ENSMUSP00000141155	TRANSLATION	protein_coding	start	-	5	31	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000101725	Gm29423	ENSMUST00000187904	ENSMUSP00000140960	TRANSLATION	nonsense_mediated_decay	start	-	3	31	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000101725	Gm29423	ENSMUST00000189006	ENSMUSP00000140691	TRANSLATION	protein_coding	-	-	5	55	0	0	0	0	0	-4,-6	-	-	0	PRINCIPAL:5
ENSMUSG00000101725	Gm29423	ENSMUST00000190274	ENSMUSP00000139984	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000101725	Gm29423	ENSMUST00000185877	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000101725	Gm29423	ENSMUST00000189304	ENSMUSP00000139415	TRANSLATION	nonsense_mediated_decay	-	-	5	49	0	0	0	0	0	-4,0	-	-	-1	MINOR
ENSMUSG00000094679	Gm21721	ENSMUST00000189253	ENSMUSP00000139987	TRANSLATION	protein_coding	-	-	3	227	0	1	1.5	186.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094679	Gm21721	ENSMUST00000179595	ENSMUSP00000136336	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	186.2	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096650	Gm20896	ENSMUST00000188585	ENSMUSP00000139596	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096650	Gm20896	ENSMUST00000180332	ENSMUSP00000137594	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000069053	Uba1y	ENSMUST00000115894	ENSMUSP00000111560	TRANSLATION	protein_coding	-	CCDS30540.1	5	1058	19	22.4	3.9	1017.7	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000069053	Uba1y	ENSMUST00000190013	ENSMUSP00000140543	TRANSLATION	protein_coding	-	CCDS30540.1	1	1058	19	22.4	3.9	1017.7	0	-4,-7	-	-	19	PRINCIPAL:1
ENSMUSG00000096626	Gm21861	ENSMUST00000190806	ENSMUSP00000139535	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096626	Gm21861	ENSMUST00000179480	ENSMUSP00000137215	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094729	Gm20747	ENSMUST00000187856	ENSMUSP00000139491	TRANSLATION	protein_coding	-	CCDS85884.1	1	227	0	1	1.5	201.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094729	Gm20747	ENSMUST00000179137	ENSMUSP00000136937	TRANSLATION	protein_coding	-	CCDS85884.1	-	227	0	1	1.5	201.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095867	Gm20917	ENSMUST00000188706	ENSMUSP00000140501	TRANSLATION	protein_coding	-	CCDS85906.1	1	227	0	1	1.5	203.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095867	Gm20917	ENSMUST00000179922	ENSMUSP00000137546	TRANSLATION	protein_coding	-	CCDS85906.1	-	227	0	1	1.5	203.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096819	Srsy	ENSMUST00000179900	ENSMUSP00000136342	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000103528	Gm31571	ENSMUST00000192521	ENSMUSP00000141784	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095324	Gm20825	ENSMUST00000178149	ENSMUSP00000136231	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095324	Gm20825	ENSMUST00000178396	ENSMUSP00000136143	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094789	Gm28490	ENSMUST00000179076	ENSMUSP00000136022	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	44	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094789	Gm28490	ENSMUST00000190946	ENSMUSP00000140770	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	76.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100726	Gm21497	ENSMUST00000189455	ENSMUSP00000140668	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094911	Gm21921	ENSMUST00000180040	ENSMUSP00000136538	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000095759	Gm21828	ENSMUST00000178050	ENSMUSP00000136822	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000096666	Gm20852	ENSMUST00000178761	ENSMUSP00000135934	TRANSLATION	protein_coding	-	CCDS85892.1	-	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096666	Gm20852	ENSMUST00000188011	ENSMUSP00000140403	TRANSLATION	protein_coding	-	CCDS85892.1	1	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000100856	Gm21627	ENSMUST00000187768	ENSMUSP00000140851	TRANSLATION	protein_coding	-	-	1	219	0	2.926	0.5	85.4	0	-4,-6	-	-	12	PRINCIPAL:1
ENSMUSG00000094081	Gm20826	ENSMUST00000185348	ENSMUSP00000140488	TRANSLATION	protein_coding	-	CCDS85848.1	5	227	0	1	1.5	198.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094081	Gm20826	ENSMUST00000179256	ENSMUSP00000137147	TRANSLATION	protein_coding	-	CCDS85848.1	-	227	0	1	1.5	198.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095900	Gm20773	ENSMUST00000178940	ENSMUSP00000137200	TRANSLATION	protein_coding	stop	-	-	227	0	1	1.5	226	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000095900	Gm20773	ENSMUST00000193306	ENSMUSP00000142165	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	226	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000093883	Gm21866	ENSMUST00000178428	ENSMUSP00000136288	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000104191	Gm30737	ENSMUST00000192683	ENSMUSP00000141356	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	83	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000056673	Kdm5d	ENSMUST00000187296	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056673	Kdm5d	ENSMUST00000188910	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056673	Kdm5d	ENSMUST00000186696	ENSMUSP00000140663	TRANSLATION	nonsense_mediated_decay	-	-	5	691	19	12.15	0	322.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056673	Kdm5d	ENSMUST00000185542	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056673	Kdm5d	ENSMUST00000189069	ENSMUSP00000139636	TRANSLATION	protein_coding	-	-	1	476	9	8.15	0	173.8	0	-4,-5	-	-	0	MINOR
ENSMUSG00000056673	Kdm5d	ENSMUST00000189626	-	NO_TRANSLATION	retained_intron
ENSMUSG00000056673	Kdm5d	ENSMUST00000186726	ENSMUSP00000140462	TRANSLATION	nonsense_mediated_decay	-	-	1	271	0	5.15	0	127.7	0	-4,-5	-	-	-1	MINOR
ENSMUSG00000056673	Kdm5d	ENSMUST00000055032	ENSMUSP00000061095	TRANSLATION	protein_coding	-	CCDS30541.1	1	1548	19	14.75	1.5	670.7	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000056673	Kdm5d	ENSMUST00000189955	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095950	Gm20737	ENSMUST00000179665	ENSMUSP00000136272	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095950	Gm20737	ENSMUST00000187245	ENSMUSP00000139604	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000053211	Zfy1	ENSMUST00000189888	ENSMUSP00000140600	TRANSLATION	protein_coding	-	CCDS30539.1	1	782	47	0.28	0.5	473.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000053211	Zfy1	ENSMUST00000065545	ENSMUSP00000069364	TRANSLATION	protein_coding	-	CCDS30539.1	1	782	47	0.28	0.5	473.1	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000101667	Gm29289	ENSMUST00000188358	ENSMUSP00000139969	TRANSLATION	protein_coding	stop	-	5	166	0	2.8	0	67.9	0	-4,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000101653	Gm20792	ENSMUST00000189765	ENSMUSP00000140983	TRANSLATION	protein_coding	-	-	1	222	0	2.826	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094939	Gm21773	ENSMUST00000179355	ENSMUSP00000136679	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000100467	Gm29582	ENSMUST00000185667	ENSMUSP00000139915	TRANSLATION	protein_coding	-	-	1	222	0	2.826	0.5	76.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100231	Gm29554	ENSMUST00000187922	ENSMUSP00000139522	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	83.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096902	Gm20843	ENSMUST00000191305	ENSMUSP00000140105	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000096902	Gm20843	ENSMUST00000178505	ENSMUSP00000136575	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000100645	Gm28576	ENSMUST00000189007	ENSMUSP00000140720	TRANSLATION	protein_coding	-	-	1	222	0	2.86	0.5	85.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101243	Gm28919	ENSMUST00000190026	ENSMUSP00000139611	TRANSLATION	protein_coding	-	-	1	240	0	3.4	0	94.8	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095148	Gm20873	ENSMUST00000179410	ENSMUSP00000136403	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	216.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095148	Gm20873	ENSMUST00000187857	ENSMUSP00000140138	TRANSLATION	protein_coding	-	-	1	232	0	1	0.5	216.1	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096686	Gm20830	ENSMUST00000190426	ENSMUSP00000141026	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	201.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096686	Gm20830	ENSMUST00000178016	ENSMUSP00000135925	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	201.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096898	Gm20867	ENSMUST00000178900	ENSMUSP00000136459	TRANSLATION	protein_coding	-	CCDS85904.1	-	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000096898	Gm20867	ENSMUST00000190987	ENSMUSP00000139713	TRANSLATION	protein_coding	-	CCDS85904.1	1	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095573	H2al2b	ENSMUST00000168551	ENSMUSP00000132924	TRANSLATION	protein_coding	-	CCDS53251.1	-	111	0	0.8	0.5	21.7	0	-4,0	-	-	12	PRINCIPAL:1
ENSMUSG00000095948	Gm21708	ENSMUST00000180310	ENSMUSP00000137266	TRANSLATION	protein_coding	-	CCDS85841.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095948	Gm21708	ENSMUST00000188091	ENSMUSP00000140216	TRANSLATION	protein_coding	-	CCDS85841.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095948	Gm21708	ENSMUST00000190283	ENSMUSP00000139659	TRANSLATION	protein_coding	-	CCDS85841.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000099792	Gm29564	ENSMUST00000185575	ENSMUSP00000139621	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101915	Gm28102	ENSMUST00000187146	ENSMUSP00000140242	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	84.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000069049	Eif2s3y	ENSMUST00000137006	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069049	Eif2s3y	ENSMUST00000148961	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069049	Eif2s3y	ENSMUST00000139083	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000069049	Eif2s3y	ENSMUST00000091197	ENSMUSP00000088736	TRANSLATION	protein_coding	-	CCDS30542.1	1	472	31	10.5	21.5	124.6	0	-4,-5	-	-	22	PRINCIPAL:1
ENSMUSG00000069049	Eif2s3y	ENSMUST00000134820	-	NO_TRANSLATION	retained_intron
ENSMUSG00000069049	Eif2s3y	ENSMUST00000154556	-	NO_TRANSLATION	retained_intron
ENSMUSG00000095135	Gm21858	ENSMUST00000185713	ENSMUSP00000140010	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095135	Gm21858	ENSMUST00000177834	ENSMUSP00000135983	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000100902	Gm20850	ENSMUST00000188672	ENSMUSP00000141004	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095979	Gm21209	ENSMUST00000178556	ENSMUSP00000136754	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000095979	Gm21209	ENSMUST00000189354	ENSMUSP00000139400	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000096223	Gm21874	ENSMUST00000178374	ENSMUSP00000137027	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	211.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096223	Gm21874	ENSMUST00000190315	ENSMUSP00000139963	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	211.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000091987	Gm10352	ENSMUST00000166474	ENSMUSP00000129935	TRANSLATION	protein_coding	-	CCDS85837.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000091987	Gm10352	ENSMUST00000187842	ENSMUSP00000140575	TRANSLATION	protein_coding	-	CCDS85837.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000093903	Gm21454	ENSMUST00000192204	ENSMUSP00000141810	TRANSLATION	protein_coding	-	-	1	232	0	1	0.5	219	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000093903	Gm21454	ENSMUST00000178599	ENSMUSP00000136379	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	219	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000100485	Gm20920	ENSMUST00000187477	ENSMUSP00000140677	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094773	Gm21812	ENSMUST00000179590	ENSMUSP00000136639	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	202.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094773	Gm21812	ENSMUST00000188908	ENSMUSP00000140302	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	202.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094161	Gm21904	ENSMUST00000179522	ENSMUSP00000136284	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000096016	Gm20937	ENSMUST00000180329	ENSMUSP00000136591	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000096016	Gm20937	ENSMUST00000189422	ENSMUSP00000140064	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:5
ENSMUSG00000096016	Gm20937	ENSMUST00000189084	ENSMUSP00000139975	TRANSLATION	protein_coding	-	-	1	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000100032	Gm20817	ENSMUST00000191123	ENSMUSP00000140565	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095011	Gm20838	ENSMUST00000179884	ENSMUSP00000136992	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000095011	Gm20838	ENSMUST00000187712	ENSMUSP00000140626	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099894	Gm20911	ENSMUST00000187135	ENSMUSP00000141161	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	84.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095172	Gm20822	ENSMUST00000165756	ENSMUSP00000130886	TRANSLATION	protein_coding	-	CCDS85863.1	-	228	0	1	1.5	187.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095172	Gm20822	ENSMUST00000188422	ENSMUSP00000139707	TRANSLATION	protein_coding	-	CCDS85863.1	1	228	0	1	1.5	187.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000100939	Gm28998	ENSMUST00000186194	ENSMUSP00000140653	TRANSLATION	protein_coding	-	-	1	222	0	2.86	0.5	85.1	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101053	Gm20815	ENSMUST00000115496	ENSMUSP00000111158	TRANSLATION	protein_coding	-	CCDS85850.1	1	227	0	1	1.5	202.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095693	Gm21820	ENSMUST00000179056	ENSMUSP00000136023	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000094507	Gm21913	ENSMUST00000179880	ENSMUSP00000135928	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000101933	Gm20835	ENSMUST00000185565	ENSMUSP00000140944	TRANSLATION	protein_coding	-	-	5	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094484	Gm21244	ENSMUST00000178447	ENSMUSP00000137217	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	198.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094484	Gm21244	ENSMUST00000189201	ENSMUSP00000139421	TRANSLATION	protein_coding	-	-	5	227	0	1	1.5	198.9	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095606	Gm21258	ENSMUST00000191553	ENSMUSP00000139882	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	85.9	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000095606	Gm21258	ENSMUST00000178673	ENSMUSP00000136718	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	85.9	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000101286	Gm21317	ENSMUST00000185636	ENSMUSP00000140162	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094511	Gm21693	ENSMUST00000186047	ENSMUSP00000139784	TRANSLATION	protein_coding	-	CCDS85839.1	1	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000094511	Gm21693	ENSMUST00000178531	ENSMUSP00000136819	TRANSLATION	protein_coding	-	CCDS85839.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000095879	Gm21764	ENSMUST00000179219	ENSMUSP00000136798	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000099550	Gm28079	ENSMUST00000187271	ENSMUSP00000140429	TRANSLATION	nonsense_mediated_decay	start	-	5	31	0	0	0	0	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000099550	Gm28079	ENSMUST00000186006	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000191151	ENSMUSP00000139670	TRANSLATION	protein_coding	stop	-	5	54	0	1.75	0	47.4	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000099550	Gm28079	ENSMUST00000186184	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000186763	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000190418	ENSMUSP00000139495	TRANSLATION	nonsense_mediated_decay	-	-	5	43	0	1	0	0	0	-4,-1	-	-	-1	MINOR
ENSMUSG00000099550	Gm28079	ENSMUST00000189328	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000185688	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000188634	-	NO_TRANSLATION	processed_transcript
ENSMUSG00000099550	Gm28079	ENSMUST00000188554	ENSMUSP00000139506	TRANSLATION	protein_coding	-	-	5	176	0	2.75	0	111.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096820	Gm21425	ENSMUST00000180318	ENSMUSP00000137250	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096820	Gm21425	ENSMUST00000195626	ENSMUSP00000141545	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000096706	Gm21854	ENSMUST00000179901	ENSMUSP00000136526	TRANSLATION	protein_coding	start	-	-	156	0	1	0	121.4	0	-4,-2	-	-	-1	MINOR
ENSMUSG00000096706	Gm21854	ENSMUST00000190391	ENSMUSP00000139409	TRANSLATION	protein_coding	-	-	5	232	0	2	0.5	199.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094325	Gm20831	ENSMUST00000177639	ENSMUSP00000136638	TRANSLATION	protein_coding	-	CCDS85866.1	5	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094325	Gm20831	ENSMUST00000194411	ENSMUSP00000142081	TRANSLATION	protein_coding	-	CCDS85866.1	1	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094739	Gm20806	ENSMUST00000190349	ENSMUSP00000141047	TRANSLATION	protein_coding	-	CCDS85905.1	1	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094739	Gm20806	ENSMUST00000180324	ENSMUSP00000136000	TRANSLATION	protein_coding	-	CCDS85905.1	-	227	0	1	1.5	204.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000093918	Gm21677	ENSMUST00000179508	ENSMUSP00000136939	TRANSLATION	protein_coding	-	CCDS85838.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000093918	Gm21677	ENSMUST00000189592	ENSMUSP00000139527	TRANSLATION	protein_coding	-	CCDS85838.1	5	380	0	2.8	0.5	65.7	0	-4,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000096178	Gm20837	ENSMUST00000178446	ENSMUSP00000137363	TRANSLATION	protein_coding	stop	-	5	166	0	2.25	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000096178	Gm20837	ENSMUST00000190558	ENSMUSP00000139688	TRANSLATION	protein_coding	-	-	5	188	0	2.806	0.5	75.6	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101766	Gm20908	ENSMUST00000186004	ENSMUSP00000140733	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096850	Gm21748	ENSMUST00000179623	ENSMUSP00000137361	TRANSLATION	protein_coding	-	-	-	102	3	0	0	0	0	-4,-6	-	-	3	PRINCIPAL:1
ENSMUSG00000101158	Gm20894	ENSMUST00000188864	ENSMUSP00000141039	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095452	Gm20795	ENSMUST00000178528	ENSMUSP00000136073	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095452	Gm20795	ENSMUST00000190909	ENSMUSP00000139666	TRANSLATION	protein_coding	-	-	1	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000102122	Gm20883	ENSMUST00000185245	ENSMUSP00000140542	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000100055	Gm20890	ENSMUST00000189518	ENSMUSP00000140218	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101928	Gm20824	ENSMUST00000186739	ENSMUSP00000140952	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	81.7	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000079806	Gm21719	ENSMUST00000115940	ENSMUSP00000129824	TRANSLATION	protein_coding	-	-	-	230	0	1	0.5	184.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000079806	Gm21719	ENSMUST00000189073	ENSMUSP00000139615	TRANSLATION	protein_coding	-	-	5	230	0	1	0.5	184.5	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000093868	Gm20809	ENSMUST00000179663	ENSMUSP00000137177	TRANSLATION	protein_coding	-	CCDS85871.1	-	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000093868	Gm20809	ENSMUST00000187943	ENSMUSP00000140802	TRANSLATION	protein_coding	-	CCDS85871.1	1	227	0	1	1.5	196.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095267	Ssty1	ENSMUST00000186035	ENSMUSP00000139883	TRANSLATION	protein_coding	-	CCDS85867.1	1	232	0	1	0.5	219	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000095267	Ssty1	ENSMUST00000180056	ENSMUSP00000137527	TRANSLATION	protein_coding	-	CCDS85867.1	-	232	0	1	0.5	219	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000069044	Usp9y	ENSMUST00000091188	ENSMUSP00000088727	TRANSLATION	protein_coding	-	CCDS30544.1	1	2556	8	2.16	0.5	162.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000099856	Gm20906	ENSMUST00000186493	ENSMUSP00000140305	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000102045	Gm21294	ENSMUST00000186443	ENSMUSP00000140933	TRANSLATION	protein_coding	-	-	5	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093950	Gm20823	ENSMUST00000179949	ENSMUSP00000136451	TRANSLATION	protein_coding	-	CCDS85889.1	1	227	0	1	1.5	191.8	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000091077	Gm21292	ENSMUST00000171947	ENSMUSP00000131393	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	203.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000091077	Gm21292	ENSMUST00000190329	ENSMUSP00000139843	TRANSLATION	protein_coding	-	-	5	227	0	1	1.5	203.2	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000000103	Zfy2	ENSMUST00000187148	ENSMUSP00000139591	TRANSLATION	protein_coding	-	CCDS41217.1	1	777	43	0.28	0.5	495.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000000103	Zfy2	ENSMUST00000115891	ENSMUSP00000111557	TRANSLATION	protein_coding	-	CCDS41217.1	1	777	43	0.28	0.5	495.5	0	-4,-5	-	-	18	PRINCIPAL:1
ENSMUSG00000095650	Gm20854	ENSMUST00000178889	ENSMUSP00000136905	TRANSLATION	protein_coding	-	CCDS85913.1	-	227	0	1	1.5	199.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000095650	Gm20854	ENSMUST00000181549	ENSMUSP00000138074	TRANSLATION	protein_coding	-	CCDS85913.1	5	227	0	1	1.5	199.1	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000099740	Gm28897	ENSMUST00000185340	ENSMUSP00000140644	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099840	Gm21409	ENSMUST00000186110	ENSMUSP00000140850	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000099782	Gm20903	ENSMUST00000189346	ENSMUSP00000141119	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094782	Gm21256	ENSMUST00000179672	ENSMUSP00000135931	TRANSLATION	protein_coding	stop	-	5	166	0	1.85	0	42	0	-4,-7	-	-	-1	MINOR
ENSMUSG00000094782	Gm21256	ENSMUST00000188881	ENSMUSP00000140938	TRANSLATION	protein_coding	-	-	1	222	0	2.806	0.5	75	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094294	Gm20909	ENSMUST00000178234	ENSMUSP00000137500	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	201.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094294	Gm20909	ENSMUST00000181205	ENSMUSP00000137876	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	201.3	0	-4,-2	-	-	12	PRINCIPAL:1
ENSMUSG00000094616	Gm20888	ENSMUST00000186890	ENSMUSP00000140067	TRANSLATION	protein_coding	-	-	1	222	0	3.326	0.5	86.2	0	-4,-7	-	-	12	PRINCIPAL:3
ENSMUSG00000094616	Gm20888	ENSMUST00000178934	ENSMUSP00000137536	TRANSLATION	protein_coding	-	-	5	188	0	2.826	0.5	86.2	0	-4,-7	-	-	10.998	ALTERNATIVE:2
ENSMUSG00000100708	Gm21173	ENSMUST00000189238	ENSMUSP00000140477	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000104267	Gm20807	ENSMUST00000194687	ENSMUSP00000142185	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	226.3	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000103468	Gm21440	ENSMUST00000192749	ENSMUSP00000141432	TRANSLATION	protein_coding	-	-	1	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094404	Gm21776	ENSMUST00000177676	ENSMUSP00000137326	TRANSLATION	protein_coding	stop	-	-	361	0	0	0	0	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000096120	Gm21800	ENSMUST00000178559	ENSMUSP00000136321	TRANSLATION	protein_coding	-	-	-	180	2	0	0.5	0	0	-4,-7	-	-	2	PRINCIPAL:1
ENSMUSG00000095508	Gm20812	ENSMUST00000189550	ENSMUSP00000139838	TRANSLATION	protein_coding	-	-	1	227	0	1	1.5	186.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000095508	Gm20812	ENSMUST00000179220	ENSMUSP00000137553	TRANSLATION	protein_coding	-	-	-	227	0	1	1.5	186.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000101471	Gm29276	ENSMUST00000190453	ENSMUSP00000139523	TRANSLATION	protein_coding	-	-	1	222	0	2.926	0.5	75.4	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093895	Gm21865	ENSMUST00000191443	ENSMUSP00000140679	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	83	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000093895	Gm21865	ENSMUST00000177713	ENSMUSP00000136800	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094570	Gm20931	ENSMUST00000180249	ENSMUSP00000137051	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	49.7	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000094570	Gm20931	ENSMUST00000187293	ENSMUSP00000140468	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	85.3	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000096769	Gm21117	ENSMUST00000180133	ENSMUSP00000136710	TRANSLATION	protein_coding	stop	-	5	166	0	2.1	0	47.3	0	-4,-6	-	-	-1	MINOR
ENSMUSG00000096769	Gm21117	ENSMUST00000185327	ENSMUSP00000139807	TRANSLATION	protein_coding	-	-	1	222	0	3.056	0.5	83.5	0	-4,-7	-	-	12	PRINCIPAL:1
ENSMUSG00000094813	Gm20777	ENSMUST00000187434	ENSMUSP00000140872	TRANSLATION	protein_coding	-	-	5	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000094813	Gm20777	ENSMUST00000177818	ENSMUSP00000136036	TRANSLATION	protein_coding	-	-	-	232	0	1	0.5	225.9	0	-4,-1	-	-	12	PRINCIPAL:1
ENSMUSG00000064358	mt-Co3	ENSMUST00000082409	ENSMUSP00000080997	TRANSLATION	protein_coding	stop	-	-	261	0	1	13.5	429.5	0	-4,-6	-	-	-1	PRINCIPAL:1
ENSMUSG00000064356	mt-Atp8	ENSMUST00000082407	ENSMUSP00000080995	TRANSLATION	protein_coding	-	-	-	67	0	0	2.7	78.6	0	-2,-5	-	-	6	PRINCIPAL:1
ENSMUSG00000064370	mt-Cytb	ENSMUST00000082421	ENSMUSP00000081003	TRANSLATION	protein_coding	stop	-	-	381	80	1	0.5	125.9	0	-4,-7	-	-	-1	PRINCIPAL:1
ENSMUSG00000065947	mt-Nd4l	ENSMUST00000084013	ENSMUSP00000081021	TRANSLATION	protein_coding	-	-	-	98	0	1	1.5	62.7	0	0,-4	-	-	12	PRINCIPAL:1
ENSMUSG00000064368	mt-Nd6	ENSMUST00000082419	ENSMUSP00000081002	TRANSLATION	protein_coding	-	-	-	172	0	1	0.5	65.6	0	-1,-5	-	-	12	PRINCIPAL:1
ENSMUSG00000064357	mt-Atp6	ENSMUST00000082408	ENSMUSP00000080996	TRANSLATION	protein_coding	-	-	-	226	3	1	7.5	138.7	0	-4,-6	-	-	18	PRINCIPAL:1
ENSMUSG00000064341	mt-Nd1	ENSMUST00000082392	ENSMUSP00000080991	TRANSLATION	protein_coding	start	-	-	318	0	1	1.5	348.8	0	0,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000064354	mt-Co2	ENSMUST00000082405	ENSMUSP00000080994	TRANSLATION	protein_coding	-	-	-	227	10	1	6.4	306.2	0	-4,-7	-	-	20	PRINCIPAL:1
ENSMUSG00000064363	mt-Nd4	ENSMUST00000082414	ENSMUSP00000081000	TRANSLATION	protein_coding	stop	-	-	459	0	1	1.5	252.6	0	0,-4	-	-	-1	PRINCIPAL:1
ENSMUSG00000064367	mt-Nd5	ENSMUST00000082418	ENSMUSP00000081001	TRANSLATION	protein_coding	start	-	-	607	0	1	0.5	476.5	0	2,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000064345	mt-Nd2	ENSMUST00000082396	ENSMUSP00000080992	TRANSLATION	protein_coding	start	-	-	345	0	1	0.5	226.3	0	0,-3	-	-	-1	PRINCIPAL:1
ENSMUSG00000064360	mt-Nd3	ENSMUST00000082411	ENSMUSP00000080998	TRANSLATION	protein_coding	start	-	-	115	0	1	0.5	98.4	0	-1,-5	-	-	-1	PRINCIPAL:1
ENSMUSG00000064351	mt-Co1	ENSMUST00000082402	ENSMUSP00000080993	TRANSLATION	protein_coding	-	-	-	514	70	1	15.3	476.4	0	-4,-5	-	-	22	PRINCIPAL:1